PeakID (cmd=annotatePeaks.pl Podo_ab4729/Podo_ab4729_MAnorm_result_nohead_for_homer.bed mm10) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type unique_peak1_72_6_3.09706051350832_4.35588517881177_11.4370924890439 chr19 23142992 23143954 + 11.4370924890439 NA intron (NM_010638, intron 1 of 1) intron (NM_010638, intron 1 of 1) 2247 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_191_57_1.43172971259795_6.57384585142654_10.6878676562689 chr12 76562942 76565443 + 10.6878676562689 NA intron (NM_153804, intron 5 of 18) intron (NM_153804, intron 5 of 18) -16267 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_327_132_1.00156717295276_7.55606602197757_10.2917798476368 chr14 54575990 54578295 + 10.2917798476368 NA exon (NM_010590, exon 1 of 8) exon (NM_010590, exon 1 of 8) 519 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_119_26_1.86153508388917_5.68565504410805_9.97392296298625 chr9 35359234 35361147 + 9.97392296298625 NA Intergenic Intergenic 79085 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA unique_peak2_50_126_-1.59801822720826_6.18967557316804_9.84526881879265 chr15 11642477 11644011 + 9.84526881879265 NA Intergenic Intergenic -243586 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_48_2_3.7483956426449_3.45916032204361_9.45227926128582 chr1 89823087 89823944 + 9.45227926128582 NA intron (NM_001037136, intron 12 of 16) intron (NM_001037136, intron 12 of 16) 107661 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding unique_peak1_42_1_4.14624253020943_3.07312126510472_9.15360136420461 chr16 92419357 92419893 + 9.15360136420461 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) -19547 NM_019466 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak1_67_8_2.6328508763209_4.48635043960276_9.09468079147279 chr14 70554460 70555412 + 9.09468079147279 NA 5' UTR (NM_021877, exon 2 of 20) 5' UTR (NM_021877, exon 2 of 20) 880 NM_021877 15460 Mm.7598 NM_021877 ENSMUSG00000022096 Hr ALUNC|AU|N|ba|bldy|hr|rh|rh-bmh|rhino hairless protein-coding common_peak1_317_134_0.935680101299996_7.54465564770083_8.96657714332306 chr2 27885420 27888122 + 8.96657714332306 NA 5' UTR (NM_015734, exon 1 of 66) 5' UTR (NM_015734, exon 1 of 66) 346 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_322_139_0.905561291572348_7.58206366273114_8.62716039731978 chr3 81029288 81031674 + 8.62716039731978 NA Intergenic Intergenic -5935 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_57_6_2.76755809931966_4.19113397171744_8.37587362740872 chr14 57289754 57290690 + 8.37587362740872 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 108261 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_226_86_1.08664881424612_6.98626790297179_8.33911755514327 chr14 54576149 54577342 + 8.33911755514327 NA exon (NM_010590, exon 1 of 8) exon (NM_010590, exon 1 of 8) 916 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_202_73_1.1600637257492_6.78948522850355_8.22827276832937 chr14 70574938 70577502 + 8.22827276832937 NA Intergenic G-rich|Low_complexity|Low_complexity -1604 NM_153136 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding unique_peak1_53_5_2.887584350179_4.02875467581066_8.03865964887423 chr6 146952973 146953886 + 8.03865964887423 NA exon (NM_001164236, exon 2 of 3) exon (NM_001164236, exon 2 of 3) 992 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_33_90_-1.69796378286224_5.65881274876757_7.7427433490123 chr8 64582042 64582868 + 7.7427433490123 NA Intergenic Intergenic -68014 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_193_278_-0.819565736991353_7.71433844333351_7.56627178808017 chr19 28246284 28248689 + 7.56627178808017 NA Intergenic Intergenic -236320 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_192_71_1.12722736902788_6.73353868595625_7.5223120782522 chr14 122106342 122108138 + 7.5223120782522 NA promoter-TSS (NR_015586) promoter-TSS (NR_015586) 158 NM_080556 68059 Mm.275191 NM_080556 ENSMUSG00000025544 Tm9sf2 1500001N15Rik|AA536814|D14Ertd64e|P76 transmembrane 9 superfamily member 2 protein-coding common_peak1_150_49_1.30174171448231_6.29472704701588_7.44523301021347 chr19 42013462 42014958 + 7.44523301021347 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -21828 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding unique_peak1_100_25_1.66905818111632_5.53496880869925_7.43448581879846 chr14 20348280 20349230 + 7.43448581879846 NA promoter-TSS (NM_027475) promoter-TSS (NM_027475) 593 NM_001360364 105428 Mm.206990 NM_172379 ENSMUSG00000039599 Fam149b AA536717|AI428773|Fam149b1|mKIAA0974 family with sequence similarity 149, member B protein-coding unique_peak1_34_1_3.8513559925458_2.9256779962729_7.42783416306327 chr8 22754364 22754590 + 7.42783416306327 NA Intergenic Intergenic -3245 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding common_peak2_66_132_-1.2737294178608_6.41841772657079_7.39496560385873 chr13 41704533 41705749 + 7.39496560385873 NA Intergenic Intergenic 98925 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_61_9_2.34852144466542_4.49618881722007_7.34801627843291 chr14 63122642 63123323 + 7.34801627843291 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 520 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_276_362_-0.689065894679835_8.15929279065583_7.30864112613354 chr15 80025949 80028228 + 7.30864112613354 NA Intergenic URR1A|DNA|hAT-Charlie -12280 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_173_62_1.17141372053156_6.5629867837657_7.2998246075186 chr14 121239712 121240765 + 7.2998246075186 NA intron (NM_134082, intron 11 of 26) intron (NM_134082, intron 11 of 26) -8468 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_64_10_2.27870847499845_4.59878585613652_7.29408619576097 chr10 86023056 86024361 + 7.29408619576097 NA intron (NM_001310745, intron 1 of 8) intron (NM_001310745, intron 1 of 8) 1554 NM_001347151 69754 Mm.44236 NM_153195 ENSMUSG00000001786 Fbxo7 2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118 F-box protein 7 protein-coding unique_peak2_5_41_-3.06733181718702_3.85865151418525_7.28053768604396 chr17 79590434 79590951 + 7.28053768604396 NA Intergenic Intergenic -24208 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak1_139_44_1.34539293706964_6.1645495648645_7.27502038952436 chr14 52019735 52020822 + 7.27502038952436 NA promoter-TSS (NM_001253694) promoter-TSS (NM_001253694) 455 NM_001253696 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding common_peak1_338_158_0.791220369030106_7.70849313979941_7.25206953928179 chr15 102971606 102974467 + 7.25206953928179 NA promoter-TSS (NR_029722) promoter-TSS (NR_029722) -314 NR_029722 723958 NR_029722 ENSMUSG00000065488 Mir196a-2 Mirn196a-2|mir-196a-2 microRNA 196a-2 ncRNA common_peak1_314_144_0.819008147839291_7.58941316393458_7.20266171162105 chr17 35700196 35703407 + 7.20266171162105 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 243 NM_001198831 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak2_203_285_-0.783314836360971_7.7682139185979_7.20066537023384 chr8 94808984 94812313 + 7.20066537023384 NA intron (NM_011332, intron 1 of 2) intron (NM_011332, intron 1 of 2) 195 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding unique_peak1_42_3_3.14624253020943_3.57312126510472_7.18213847587511 chr7 28420514 28420984 + 7.18213847587511 NA intron (NM_175021, intron 2 of 12) intron (NM_175021, intron 2 of 12) 15442 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_166_59_1.18298177641803_6.49838148381753_7.08669015968536 chr19 4230730 4231699 + 7.08669015968536 NA promoter-TSS (NM_027196) promoter-TSS (NM_027196) -679 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak2_141_217_-0.910618562643438_7.31287504345521_7.05897778961867 chr15 88853831 88856235 + 7.05897778961867 NA Intergenic Intergenic -7161 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak1_276_122_0.872245337976675_7.37863717432758_7.04107665600802 chr3 145683862 145686141 + 7.04107665600802 NA Intergenic Intergenic -35016 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_642_356_0.541341014751888_8.75045077140504_7.00764716251164 chr14 76503967 76509580 + 7.00764716251164 NA 3' UTR (NM_001177751, exon 3 of 3) 3' UTR (NM_001177751, exon 3 of 3) 2263 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding unique_peak1_36_2_3.34599824033629_3.2579616208893_6.95833233679549 chr2 168596027 168596722 + 6.95833233679549 NA intron (NM_001291169, intron 1 of 10) intron (NM_001291169, intron 1 of 10) 5283 NM_001291171 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_56_8_2.38007405533029_4.35996202910746_6.95105105391379 chr1 11089111 11089938 + 6.95105105391379 NA intron (NM_029525, intron 5 of 39) intron (NM_029525, intron 5 of 39) 96059 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak1_40_3_3.07801454717368_3.53900727358684_6.91732298834814 chr1 182793202 182793909 + 6.91732298834814 NA intron (NM_001356462, intron 2 of 8) intron (NM_001356462, intron 2 of 8) 28659 NM_001356463 96935 Mm.331052 NM_144796 ENSMUSG00000038576 Susd4 AI848994|E430021N18Rik|N28096 sushi domain containing 4 protein-coding unique_peak2_40_95_-1.50694795354747_5.83148852394742_6.82185248959163 chr11 78394686 78396005 + 6.82185248959163 NA intron (NR_003282, intron 3 of 4) intron (NR_003282, intron 3 of 4) 860 NR_003282 790911 Mm.457257 NR_003282 ENSMUSG00000085747 Slc13a2os Gm11194 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand ncRNA common_peak1_131_204_-0.926524074254177_7.21621806237836_6.82047505654587 chr8 94809829 94811623 + 6.82047505654587 NA intron (NM_011332, intron 1 of 2) intron (NM_011332, intron 1 of 2) 273 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding unique_peak1_52_7_2.44577005526986_4.22288502763493_6.79508483902431-2 chr14 66278101 66278792 + 6.79508483902431 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 2606 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_52_7_2.44577005526986_4.22288502763493_6.79508483902431 chr1 183917483 183918360 + 6.79508483902431 NA Intergenic Intergenic 116077 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_52_7_2.44577005526986_4.22288502763493_6.79508483902431-3 chr5 21188687 21189041 + 6.79508483902431 NA intron (NR_153365, intron 1 of 26) intron (NR_153365, intron 1 of 26) 2597 NM_001359877 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_176_66_1.10709251751912_6.61963544921733_6.74537579845632 chr19 58454046 58455997 + 6.74537579845632 NA intron (NM_001285457, intron 1 of 9) CpG 377 NM_001285457 14585 Mm.88367 NM_010279 ENSMUSG00000025089 Gfra1 AU042498 glial cell line derived neurotrophic factor family receptor alpha 1 protein-coding unique_peak1_132_43_1.30433590590874_6.11159957159166_6.73599583443387 chr7 30589198 30590364 + 6.73599583443387 NA TTS (NM_021397) TTS (NM_021397) 401 NR_106134 102465774 NR_106134 ENSMUSG00000098553 Mir3569 Gm27279|mmu-mir-3569 microRNA 3569 ncRNA common_peak1_264_343_-0.674947759824846_8.08879087478967_6.73403662552191 chr15 80026123 80028176 + 6.73403662552191 NA Intergenic URR1A|DNA|hAT-Charlie -12341 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_100_168_-1.03138153702477_6.8851886677698_6.67689581274178 chr8 124644211 124645709 + 6.67689581274178 NA intron (NM_175149, intron 2 of 3) intron (NM_175149, intron 2 of 3) 18409 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak1_231_98_0.931446442151169_7.09507984115519_6.67597079517841 chr14 76478571 76481357 + 6.67597079517841 NA intron (NM_207652, intron 1 of 2) intron (NM_207652, intron 1 of 2) -8472 NM_001177751 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_193_76_1.03776903414293_6.78567105776637_6.67519109920098 chr3 87173172 87174575 + 6.67519109920098 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 874 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_102_28_1.53960636993066_5.6277841800929_6.66385587774975 chr14 66279078 66280080 + 6.66385587774975 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 1473 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_58_116_-1.27096363426072_6.23488290245304_6.61226434908514 chr4 15957916 15958950 + 6.61226434908514 NA intron (NM_013752, intron 1 of 15) CpG 466 NM_013752 27354 Mm.20866 NM_013752 ENSMUSG00000028224 Nbn Nbs1 nibrin protein-coding common_peak2_128_198_-0.916601467680006_7.17832388670365_6.60058631977852 chr15 64362635 64364020 + 6.60058631977852 NA intron (NM_001276461, intron 1 of 28) IMPB_01|Satellite|Satellite 19592 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_31_1_3.72298506464455_2.86149253232228_6.57132529354008-2 chr3 52761976 52762569 + 6.57132529354008 NA intron (NR_038079, intron 1 of 3) intron (NR_038079, intron 1 of 3) 22548 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak1_31_1_3.72298506464455_2.86149253232228_6.57132529354008-4 chr9 62818427 62818765 + 6.57132529354008 NA Intergenic Intergenic -6948 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding unique_peak1_31_1_3.72298506464455_2.86149253232228_6.57132529354008-3 chr5 104402133 104402509 + 6.57132529354008 NA Intergenic Intergenic -32790 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak1_31_1_3.72298506464455_2.86149253232228_6.57132529354008 chr17 14514958 14515573 + 6.57132529354008 NA Intergenic Intergenic -116323 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA common_peak2_86_150_-1.08265611572036_6.6970766814649_6.57099817040088 chr9 40799844 40800830 + 6.57099817040088 NA promoter-TSS (NM_031165) promoter-TSS (NM_031165) -936 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding unique_peak2_8_43_-2.5536104108181_4.18262641322825_6.55885943208411 chr9 102300111 102300723 + 6.55885943208411 NA intron (NM_173447, intron 1 of 15) intron (NM_173447, intron 1 of 15) 4558 NR_106163 102466241 NR_106163 ENSMUSG00000098521 Mir7243 Gm27363|mmu-mir-7243 microRNA 7243 ncRNA unique_peak1_45_5_2.6578908010751_3.91390790125871_6.53280291241184 chr4 55325440 55325957 + 6.53280291241184 NA Intergenic Intergenic -24344 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak1_168_63_1.10692634554594_6.55346317277297_6.52742012155228 chr15 11064182 11065437 + 6.52742012155228 NA promoter-TSS (NM_175501) promoter-TSS (NM_175501) 36 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding common_peak2_64_123_-1.21605621675113_6.34616820201131_6.5170294931221 chr13 98678400 98679672 + 6.5170294931221 NA Intergenic Intergenic 15795 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding unique_peak2_28_76_-1.68481853974439_5.42437727082271_6.47093237648078 chr3 37940072 37941225 + 6.47093237648078 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 41835 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_81_19_1.74903147271308_5.1964438312439_6.46607301487866 chr1 160791745 160792743 + 6.46607301487866 NA intron (NM_013862, intron 1 of 20) CpG 694 NM_013862 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding unique_peak1_34_2_3.26639349182465_3.21815924663348_6.41234928278264 chr1 118671429 118672151 + 6.41234928278264 NA intron (NM_023755, intron 13 of 14) intron (NM_023755, intron 13 of 14) 43845 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding unique_peak1_61_11_2.08548703883163_4.62770602013697_6.3780034956743 chr6 34611692 34612781 + 6.3780034956743 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 13732 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_16_57_-2.04109515821788_4.83743341601863_6.36547620157964-2 chr8 44997290 44997737 + 6.36547620157964 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 47305 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_16_57_-2.04109515821788_4.83743341601863_6.36547620157964 chr10 75859522 75860285 + 6.36547620157964 NA intron (NM_010798, intron 1 of 2) CpG-1170 347 NM_010798 17319 Mm.2326 NM_010798 ENSMUSG00000033307 Mif GIF|Glif macrophage migration inhibitory factor (glycosylation-inhibiting factor) protein-coding unique_peak1_63_12_2.01549036693022_4.7081849016062_6.36540757345047 chr14 46517574 46518670 + 6.36540757345047 NA Intergenic Intergenic 57729 NR_046459 100873094 Mm.318596 NR_046459 ENSMUSG00000085123 Rubie - RNA upstream of Bmp4 expressed in inner ear ncRNA common_peak1_175_68_1.0565409866724_6.63679495011437_6.35099148527277 chr11 72495537 72497790 + 6.35099148527277 NA Intergenic Intergenic -6743 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_50_7_2.39066645956391_4.19533322978195_6.32404833861351 chr10 67488277 67489099 + 6.32404833861351 NA Intergenic Intergenic -49181 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_80_19_1.73145435824025_5.18765527400749_6.27418910525456 chr15 76012985 76013690 + 6.27418910525456 NA intron (NM_134087, intron 1 of 4) intron (NM_134087, intron 1 of 4) 999 NM_134087 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding unique_peak1_79_19_1.71365888893782_5.17875753935627_6.27418910525456 chr14 57664883 57665844 + 6.27418910525456 NA promoter-TSS (NM_020506) promoter-TSS (NM_020506) -407 NM_020506 57258 Mm.202747 NM_020506 ENSMUSG00000021952 Xpo4 B430309A01Rik|mKIAA1721 exportin 4 protein-coding unique_peak2_9_44_-2.43510117378476_4.2743025094373_6.25905356250923 chr13 45850432 45850904 + 6.25905356250923 NA intron (NM_001199304, intron 3 of 6) intron (NM_001199304, intron 3 of 6) 114323 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_77_18_1.75139128366574_5.12362315527646_6.24317717147395 chr12 83874997 83875820 + 6.24317717147395 NA intron (NR_073564, intron 2 of 12) intron (NR_073564, intron 2 of 12) 1404 NM_001272056 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb NUMB endocytic adaptor protein protein-coding common_peak1_264_120_0.832453757602657_7.33509011607592_6.23208659332455 chr19 42021172 42023478 + 6.23208659332455 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -13713 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding common_peak1_154_57_1.12507046360584_6.42051622693049_6.2320090988203 chr8 105543002 105544504 + 6.2320090988203 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 22311 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak1_222_96_0.904211830797089_7.05201875758567_6.17394651010769 chr15 103004349 103006407 + 6.17394651010769 NA Intergenic Intergenic -4184 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding unique_peak1_67_14_1.89588528215469_4.85483323668586_6.16058890298724 chr15 83530385 83531045 + 6.16058890298724 NA intron (NM_007546, intron 1 of 4) intron (NM_007546, intron 1 of 4) 3853 NM_007546 12124 Mm.267006 NM_007546 ENSMUSG00000016758 Bik Biklk|Blk|Nbk BCL2-interacting killer protein-coding unique_peak1_33_2_3.2248683566153_3.1973966790288_6.14077709290365 chr14 63427991 63428446 + 6.14077709290365 NA Intergenic Intergenic -8176 NM_177628 219148 Mm.37882 NM_177628 ENSMUSG00000035095 Fam167a A030013D21 family with sequence similarity 167, member A protein-coding unique_peak1_37_3_2.96916345454515_3.48458172727257_6.12934294182411 chr3 89089533 89090003 + 6.12934294182411 NA intron (NM_001083807, intron 2 of 9) intron (NM_001083807, intron 2 of 9) 263 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding unique_peak1_36_3_2.93096074105744_3.46548037052872_6.12934294182411 chr1 179174597 179175105 + 6.12934294182411 NA intron (NM_027188, intron 5 of 11) intron (NM_027188, intron 5 of 11) 343190 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak1_114_36_1.34600185534794_5.88245429330292_6.12320189808678 chr2 26296938 26297956 + 6.12320189808678 NA Intergenic Intergenic -2890 NM_177841 329366 Mm.77712 NM_177841 ENSMUSG00000048038 Ccdc187 4932418E24Rik coiled-coil domain containing 187 protein-coding common_peak1_185_75_0.996302648763407_6.74607883782529_6.08678955053172 chr9 57644390 57645677 + 6.08678955053172 NA 5' UTR (NM_007783, exon 1 of 13) 5' UTR (NM_007783, exon 1 of 13) 620 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding unique_peak1_76_18_1.7329069387276_5.11438098280739_6.05053282271098 chr14 66259293 66260023 + 6.05053282271098 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 21394 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak2_5_36_-2.88446776003721_3.76721948561034_6.04086174168048 chr17 80224432 80224925 + 6.04086174168048 NA intron (NM_001355458, intron 1 of 2) intron (NM_001355458, intron 1 of 2) 227 NM_001355458 67242 Mm.279985 NM_026053 ENSMUSG00000055760 Gemin6 2610019B15Rik|2810470M17Rik gem nuclear organelle associated protein 6 protein-coding unique_peak2_52_106_-1.29569693113129_6.0936185208355_6.0361799703669 chr19 47901517 47903108 + 6.0361799703669 NA intron (NM_001001738, intron 1 of 1) intron (NM_001001738, intron 1 of 1) 16987 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding unique_peak1_93_26_1.51171882156534_5.51074691294614_6.03397828994368 chr6 146955156 146955823 + 6.03397828994368 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -1068 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_22_0_4.2499082813695_2.12495414068475_6.02059991327962-3 chr14 21807216 21807474 + 6.02059991327962 NA Intergenic Intergenic -24216 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding unique_peak1_22_0_4.2499082813695_2.12495414068475_6.02059991327962-4 chr2 16459672 16460159 + 6.02059991327962 NA intron (NM_026162, intron 1 of 13) intron (NM_026162, intron 1 of 13) 103611 NM_026162 67448 Mm.313938 NM_026162 ENSMUSG00000026748 Plxdc2 1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r plexin domain containing 2 protein-coding unique_peak1_22_0_4.2499082813695_2.12495414068475_6.02059991327962-2 chr11 64759644 64759854 + 6.02059991327962 NA Intergenic Intergenic -219286 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding unique_peak1_22_0_4.2499082813695_2.12495414068475_6.02059991327962-5 chr4 46631076 46631500 + 6.02059991327962 NA intron (NM_198664, intron 3 of 12) intron (NM_198664, intron 3 of 12) 18911 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding unique_peak1_22_0_4.2499082813695_2.12495414068475_6.02059991327962 chr10 71345029 71345312 + 6.02059991327962 NA promoter-TSS (NM_134007) promoter-TSS (NM_134007) -321 NM_134007 52637 Mm.254114 NM_134007 ENSMUSG00000037710 Cisd1 AU043990|AW743335|D10Ertd214e|Zcd1|mitoNEET CDGSH iron sulfur domain 1 protein-coding common_peak2_65_121_-1.17072633273837_6.3453741711937_6.01591355548987 chr10 17364659 17366714 + 6.01591355548987 NA Intergenic Intergenic -269904 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_28_1_3.58196800095051_2.79098400047526_6.00334947154112-2 chr12 29283195 29283442 + 6.00334947154112 NA Intergenic Intergenic 141389 NR_154987 102633526 Mm.134217 NR_154987 Gm31333 - predicted gene, 31333 ncRNA unique_peak1_28_1_3.58196800095051_2.79098400047526_6.00334947154112 chr10 111601174 111601495 + 6.00334947154112 NA Intergenic Intergenic -7061 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_71_16_1.79719342784912_4.9860595551749_5.99487332546638 chr14 120324903 120325759 + 5.99487332546638 NA exon (NM_207515, exon 2 of 8) exon (NM_207515, exon 2 of 8) 18879 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak1_196_82_0.951498930727751_6.8507888967108_5.98069639421413 chr14 121245825 121247502 + 5.98069639421413 NA intron (NM_134082, intron 13 of 26) intron (NM_134082, intron 13 of 26) -2043 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_37_85_-1.45710130015695_5.69771410462362_5.9762039369406 chr2 180234588 180235777 + 5.9762039369406 NA Intergenic Intergenic -9323 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak1_61_12_1.97000982141169_4.68544462884694_5.94371904048539 chr5 148708332 148709062 + 5.94371904048539 NA Intergenic Intergenic -33143 NR_028285 70138 Mm.417834 NR_028285 ENSMUSG00000086494 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene ncRNA common_peak1_207_88_0.928639804768983_6.94005333335089_5.94025441409011 chr15 102966885 102968322 + 5.94025441409011 NA exon (NM_010462, exon 1 of 2) exon (NM_010462, exon 1 of 2) 807 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding unique_peak1_45_6_2.43549837973865_4.02510411192693_5.93511621322756 chr3 89594226 89594907 + 5.93511621322756 NA intron (NM_080466, intron 2 of 7) intron (NM_080466, intron 2 of 7) 74402 NM_080466 140493 Mm.120250 NM_080466 ENSMUSG00000000794 Kcnn3 KCa2.3|SK3|SKCA3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein-coding common_peak1_107_33_1.37802903007658_5.77647735628863_5.93406482790037 chr16 13403969 13405360 + 5.93406482790037 NA intron (NM_153588, intron 11 of 14) intron (NM_153588, intron 11 of 14) -44859 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak1_235_105_0.857370671612992_7.15660579036969_5.91698557407932 chr19 8980377 8982781 + 5.91698557407932 NA Intergenic Intergenic -7705 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_131_46_1.19836717357363_6.15377243846445_5.87808416904473 chr19 42013848 42015018 + 5.87808416904473 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -21605 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding unique_peak1_32_2_3.1821034836766_3.17601424255946_5.87023955447033 chr6 22278467 22278824 + 5.87023955447033 NA Intergenic Intergenic -9582 NM_053116 93735 Mm.137403 NM_053116 ENSMUSG00000029671 Wnt16 E130309I19Rik wingless-type MMTV integration site family, member 16 protein-coding unique_peak1_35_3_2.8917112486727_3.44585562433635_5.86906124235393 chr11 78522575 78523373 + 5.86906124235393 NA TTS (NM_026389) TTS (NM_026389) 10678 NM_026389 67811 Mm.197493 NM_026389 ENSMUSG00000001100 Poldip2 1300003F06Rik|Pdip38 polymerase (DNA-directed), delta interacting protein 2 protein-coding unique_peak2_3_30_-3.21004630702259_3.34917315687558_5.86906124235393 chr18 20459710 20460280 + 5.86906124235393 NA intron (NM_181564, intron 10 of 15) intron (NM_181564, intron 10 of 15) 23820 NM_181564 16769 Mm.358619 NM_181564 ENSMUSG00000001804 Dsg4 CDHF13|lah desmoglein 4 protein-coding unique_peak2_30_76_-1.58928202156887_5.47214552991046_5.8600120942559 chr8 103233939 103234767 + 5.8600120942559 NA Intergenic Intergenic 113181 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA unique_peak1_70_16_1.77715790045639_4.97604179147853_5.79884576385148 chr10 42477876 42478429 + 5.79884576385148 NA intron (NM_001359297, intron 1 of 11) intron (NM_001359297, intron 1 of 11) 413 NM_001359297 215951 Mm.89646 NM_145743 ENSMUSG00000038302 Afg1l CG8520|Lace1 AFG1 like ATPase protein-coding unique_peak1_41_5_2.52757219529822_3.84874859837027_5.79706174304447 chrX 19905130 19905806 + 5.79706174304447 NA Intergenic Intergenic -154102 NM_021715 60322 Mm.44827 NM_021715 ENSMUSG00000037347 Chst7 2600013M07Rik|C6ST-2|GST5|Gn6st-4|glcNAc6ST-4 carbohydrate (N-acetylglucosamino) sulfotransferase 7 protein-coding unique_peak2_5_35_-2.84493939585057_3.74745530351703_5.79706174304447 chr4 144948066 144948764 + 5.79706174304447 NA Intergenic Intergenic 55278 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_447_240_0.590589839268985_8.20818425586445_5.78758105942757 chr19 4169708 4173575 + 5.78758105942757 NA exon (NM_134148, exon 5 of 10) exon (NM_134148, exon 5 of 10) 3838 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding unique_peak1_52_9_2.1238419603825_4.38384907507861_5.76909902735933 chr16 33830717 33831410 + 5.76909902735933 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 1398 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_52_9_2.1238419603825_4.38384907507861_5.76909902735933-2 chr2 38516768 38517231 + 5.76909902735933 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 5123 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_57_11_1.98995052065611_4.57993776104921_5.73642998372103 chr9 65545527 65546354 + 5.73642998372103 NA Intergenic Intergenic 34147 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_164_65_1.0282188046467_6.5585035216818_5.73545692427544 chr5 143269522 143271265 + 5.73545692427544 NA promoter-TSS (NM_017467) promoter-TSS (NM_017467) -371 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding unique_peak1_27_1_3.53169909379193_2.76584954689596_5.72042031892562 chr2 166152040 166152492 + 5.72042031892562 NA intron (NM_001355619, intron 1 of 21) intron (NM_001355619, intron 1 of 21) 3019 NM_001355619 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding unique_peak1_21_0_4.1862303821703_2.09311519108515_5.71956991761564-5 chr7 113141856 113142093 + 5.71956991761564 NA promoter-TSS (NR_045978) promoter-TSS (NR_045978) 41 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak1_21_0_4.1862303821703_2.09311519108515_5.71956991761564-3 chr7 82649315 82649651 + 5.71956991761564 NA promoter-TSS (NM_177894) promoter-TSS (NM_177894) 869 NM_175317 101592 Mm.238020 NM_175317 ENSMUSG00000038563 Efl1 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1 elongation factor like GPTase 1 protein-coding unique_peak1_21_0_4.1862303821703_2.09311519108515_5.71956991761564 chr14 123531381 123531819 + 5.71956991761564 NA intron (NM_177393, intron 7 of 43) intron (NM_177393, intron 7 of 43) 95544 NM_177393 338370 Mm.255348 NM_177393 ENSMUSG00000000197 Nalcn A530023G15Rik|AI849508|Vgcnl1 sodium leak channel, non-selective protein-coding unique_peak1_21_0_4.1862303821703_2.09311519108515_5.71956991761564-4 chr7 99978929 99979195 + 5.71956991761564 NA intron (NM_175388, intron 1 of 5) intron (NM_175388, intron 1 of 5) 1396 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding unique_peak1_21_0_4.1862303821703_2.09311519108515_5.71956991761564-2 chr18 38101896 38102166 + 5.71956991761564 NA Intergenic Intergenic -103062 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_209_276_-0.695660530422419_7.76591190083798_5.70721674454628 chr8 124642812 124645168 + 5.70721674454628 NA intron (NM_175149, intron 2 of 3) intron (NM_175149, intron 2 of 3) 19379 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding unique_peak1_44_6_2.40401322536898_4.00936153474209_5.69854751207363 chr3 88057985 88058502 + 5.69854751207363 NA intron (NM_144897, intron 1 of 5) intron (NM_144897, intron 1 of 5) 252 NM_144897 246703 Mm.205996 NM_144897 ENSMUSG00000028070 Naxe AA087124|AI-BP|AIBP|Apoa1bp|Apoa1ip|ESTM37 NAD(P)HX epimerase protein-coding common_peak1_97_29_1.41941256818429_5.61659687970066_5.69055214593517 chr14 48120937 48122083 + 5.69055214593517 NA intron (NM_033602, intron 1 of 5) CpG 641 NM_033602 93834 Mm.296457 NM_033602 ENSMUSG00000021846 Peli2 AW047589|BB129927 pellino 2 protein-coding common_peak2_56_108_-1.21818526800432_6.15909169077476_5.65763102275514 chr5 143638252 143639924 + 5.65763102275514 NA intron (NM_011182, intron 1 of 12) intron (NM_011182, intron 1 of 12) -12153 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak1_274_131_0.759985121599875_7.42438668015839_5.65370895957648 chr3 51223920 51226083 + 5.65370895957648 NA 5' UTR (NM_009834, exon 1 of 3) 5' UTR (NM_009834, exon 1 of 3) 554 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_110_36_1.2952879980827_5.8570973646703_5.64842361242494 chr10 67185753 67186957 + 5.64842361242494 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 605 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_100_31_1.36949789925741_5.68474894962871_5.64699062507658 chr14 45387849 45388806 + 5.64699062507658 NA intron (NM_019425, intron 1 of 5) intron (NM_019425, intron 1 of 5) 469 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding common_peak2_102_161_-0.942262637826397_6.86871868397143_5.64611433435473 chr1 39367258 39369224 + 5.64611433435473 NA exon (NM_001252218, exon 1 of 4) exon (NM_001252218, exon 1 of 4) 390 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_269_128_0.766866535084297_7.3946605229654_5.64575748913177 chr3 122207671 122210353 + 5.64575748913177 NA Intergenic Intergenic -36545 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak1_260_122_0.787014740919693_7.33602187579909_5.63283049158564 chr3 51415440 51417078 + 5.63283049158564 NA 5' UTR (NM_053089, exon 1 of 20) 5' UTR (NM_053089, exon 1 of 20) 243 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding common_peak1_94_28_1.42378437859821_5.56987318442668_5.63159170541997 chr14 66297095 66298122 + 5.63159170541997 NA promoter-TSS (NR_038077) promoter-TSS (NR_038077) -479 NR_038077 69303 Mm.352258 NR_038077 ENSMUSG00000085984 1700001G11Rik - RIKEN cDNA 1700001G11 gene ncRNA unique_peak1_34_3_2.8513559925458_3.4256779962729_5.6100962539031-2 chr6 41547779 41548222 + 5.6100962539031 NA Intergenic Intergenic 26224 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding unique_peak1_34_3_2.8513559925458_3.4256779962729_5.6100962539031 chr10 17792367 17793012 + 5.6100962539031 NA Intergenic Intergenic -3530 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak1_69_16_1.75683817172222_4.96588192711145_5.60443738616815 chr7 84028221 84029106 + 5.60443738616815 NA intron (NM_030728, intron 1 of 28) intron (NM_030728, intron 1 of 28) 57842 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding unique_peak1_30_2_3.09254201840487_3.13123350992359_5.60081203524255 chr4 64085555 64085904 + 5.60081203524255 NA Intergenic Intergenic -38714 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_31_2_3.1380225639234_3.15397378268285_5.60081203524255 chr11 69413290 69413689 + 5.60081203524255 NA intron (NM_001017426, intron 1 of 22) intron (NM_001017426, intron 1 of 22) 186 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak1_31_2_3.1380225639234_3.15397378268285_5.60081203524255-3 chr14 122903598 122903946 + 5.60081203524255 NA intron (NM_145466, intron 1 of 2) intron (NM_145466, intron 1 of 2) -9258 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA unique_peak1_31_2_3.1380225639234_3.15397378268285_5.60081203524255-2 chr14 120127952 120128526 + 5.60081203524255 NA Intergenic Intergenic -85804 NM_001001490 239283 Mm.138520 NM_001001490 ENSMUSG00000044819 Oxgr1 Cysltr3|Gm299|Gpr80|Gpr99|P2Y15 oxoglutarate (alpha-ketoglutarate) receptor 1 protein-coding common_peak1_133_48_1.15978819395194_6.19460394109118_5.5855615562155 chr14 76722697 76723894 + 5.5855615562155 NA Intergenic Intergenic -36836 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_32_76_-1.49972055629714_5.51692626254633_5.57354005005408 chr4 141287335 141288002 + 5.57354005005408 NA Intergenic Intergenic 9229 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak1_273_131_0.754766475184083_7.42177735695049_5.55301789422931 chr3 157946591 157948303 + 5.55301789422931 NA 5' UTR (NM_001359909, exon 1 of 12) 5' UTR (NM_001359909, exon 1 of 12) 447 NM_001013806 433667 Mm.265806 NM_001013806 ENSMUSG00000039988 Ankrd13c AI505652|AU022220 ankyrin repeat domain 13c protein-coding common_peak2_38_84_-1.40301715945513_5.70788235641013_5.5476420777983 chr1 155056135 155057085 + 5.5476420777983 NA Intergenic Intergenic 26654 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_59_12_1.92303784748479_4.66195864188349_5.52852266947871 chr19 53040668 53041090 + 5.52852266947871 NA Intergenic Intergenic -2225 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding unique_peak2_12_47_-2.1523693466928_4.50877782737476_5.52586497724372 chr10 40246437 40247106 + 5.52586497724372 NA TTS (NM_026113) TTS (NM_026113) 208 NM_001042556 67239 Mm.11480 NM_023323 ENSMUSG00000038510 Rpf2 2810470K21Rik|AU040229|AU043242|Bxdc1 ribosome production factor 2 homolog protein-coding unique_peak1_56_11_1.96503655605145_4.56748077874688_5.52586497724372 chr16 4645972 4647154 + 5.52586497724372 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 6618 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding unique_peak1_95_29_1.38987509169024_5.60182814145364_5.52458608579797 chr19 3323481 3324512 + 5.52458608579797 NA intron (NM_013495, intron 1 of 18) CpG 695 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_75_19_1.64018038008454_5.14201828492963_5.5217762822713 chr1 179043238 179044105 + 5.5217762822713 NA intron (NM_027188, intron 10 of 11) intron (NM_027188, intron 10 of 11) 474370 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak1_83_139_-1.02380330049883_6.61738136669555_5.51773991770753 chr9 40799929 40800729 + 5.51773991770753 NA promoter-TSS (NM_031165) promoter-TSS (NM_031165) -944 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_123_183_-0.860167396077475_7.09347825801828_5.51614836359135 chr2 60703648 60705764 + 5.51614836359135 NA intron (NM_001159564, intron 1 of 17) B1_Mur1|SINE|Alu 17897 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_43_6_2.37182048053946_3.99326516232733_5.46361714676356 chr13 75790533 75790956 + 5.46361714676356 NA Intergenic Intergenic -49141 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_138_52_1.09905659681989_6.27744875297314_5.4533935826031 chr10 52381465 52383098 + 5.4533935826031 NA promoter-TSS (NM_001199272) promoter-TSS (NM_001199272) -157 NM_001199272 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding common_peak2_39_85_-1.38362279130367_5.73445335905026_5.45206132357611 chr5 151368697 151369448 + 5.45206132357611 NA intron (NR_045700, intron 1 of 3) intron (NR_045700, intron 1 of 3) 397 NR_045699 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA unique_peak2_4_31_-2.93619309788184_3.53190345105908_5.43515076581798-2 chr8 122574938 122575304 + 5.43515076581798 NA intron (NM_009698, intron 4 of 4) intron (NM_009698, intron 4 of 4) 1786 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding unique_peak2_4_31_-2.93619309788184_3.53190345105908_5.43515076581798 chr2 52938022 52938479 + 5.43515076581798 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 80382 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak1_107_35_1.2955668698846_5.81770843638461_5.42624745676224 chr19 41997180 41998398 + 5.42624745676224 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 16026 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-3 chr14 63410054 63410314 + 5.41853992195166 NA intron (NM_007549, intron 1 of 12) intron (NM_007549, intron 1 of 12) 7003 NM_007549 12143 Mm.3962 NM_007549 ENSMUSG00000014453 Blk - B lymphoid kinase protein-coding unique_peak1_20_0_4.11958967559262_2.05979483779631_5.41853992195166-3 chr4 65205005 65205388 + 5.41853992195166 NA intron (NM_021362, intron 7 of 21) intron (NM_021362, intron 7 of 21) 81022 NM_021362 18491 Mm.317854 NM_021362 ENSMUSG00000028370 Pappa 8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A pregnancy-associated plasma protein A protein-coding unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166 chr1 183942585 183942916 + 5.41853992195166 NA Intergenic Intergenic 91248 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_20_0_4.11958967559262_2.05979483779631_5.41853992195166-4 chr8 105614430 105614740 + 5.41853992195166 NA promoter-TSS (NR_035492) promoter-TSS (NR_035492) -881 NR_035492 100316712 NR_035492 ENSMUSG00000089432 Mir1966 mir-1966|mmu-mir-1966 microRNA 1966 ncRNA unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-4 chr15 80764266 80764530 + 5.41853992195166 NA intron (NM_144812, intron 3 of 24) intron (NM_144812, intron 3 of 24) -34212 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-8 chr6 17939455 17939726 + 5.41853992195166 NA intron (NM_022332, intron 15 of 15) intron (NM_022332, intron 15 of 15) 90855 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-7 chr5 91278299 91278604 + 5.41853992195166 NA intron (NR_040428, intron 3 of 5) intron (NR_040428, intron 3 of 5) 4625 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-2 chr10 60212004 60212311 + 5.41853992195166 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 7103 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-5 chr3 27475509 27475820 + 5.41853992195166 NA intron (NM_001356953, intron 12 of 26) intron (NM_001356953, intron 12 of 26) 104313 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|GHRP|GHS-R|Ghsr1a growth hormone secretagogue receptor protein-coding unique_peak1_20_0_4.11958967559262_2.05979483779631_5.41853992195166 chr15 11532883 11533111 + 5.41853992195166 NA Intergenic Intergenic -133339 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_19_0_4.04969694297167_2.02484847148584_5.41853992195166-6 chr4 8510967 8511204 + 5.41853992195166 NA Intergenic Intergenic -24559 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding unique_peak1_20_0_4.11958967559262_2.05979483779631_5.41853992195166-2 chr16 76863777 76864242 + 5.41853992195166 NA Intergenic Intergenic -84917 NR_155453 102632814 NR_155453 ENSMUSG00000109333 Gm30790 Gm45028 predicted gene, 30790 ncRNA unique_peak1_84_24_1.47857658674236_5.38314448314591_5.40576395178307 chr5 92820853 92821695 + 5.40576395178307 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 11892 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_90_27_1.41278732239839_5.5137485832568_5.40528842034465 chr19 16326196 16326927 + 5.40528842034465 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -11557 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_144_55_1.0801600185003_6.34743493130775_5.39926818855737-2 chr15 76460650 76462033 + 5.39926818855737 NA intron (NM_013481, intron 3 of 15) intron (NM_013481, intron 3 of 15) 3903 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak1_144_55_1.0801600185003_6.34743493130775_5.39926818855737 chr10 75059700 75061817 + 5.39926818855737 NA promoter-TSS (NM_001081412) promoter-TSS (NM_001081412) -138 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding common_peak1_375_197_0.623139744502713_7.94092649233097_5.38611936678651 chr3 57293091 57296085 + 5.38611936678651 NA intron (NM_001355130, intron 2 of 5) intron (NM_001355130, intron 2 of 5) 7400 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding unique_peak1_65_15_1.76001100482451_4.88000550241226_5.38214435188357 chr7 16044930 16045899 + 5.38214435188357 NA Intergenic Intergenic -26431 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding unique_peak1_48_8_2.16343314192374_4.25164157240418_5.35800994256093-2 chr9 56217846 56218278 + 5.35800994256093 NA intron (NM_172924, intron 6 of 6) intron (NM_172924, intron 6 of 6) -56992 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak1_48_8_2.16343314192374_4.25164157240418_5.35800994256093 chr15 103376339 103377113 + 5.35800994256093 NA Intergenic Intergenic -9935 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding unique_peak1_62_14_1.78647970263832_4.80013044692768_5.35707633222831 chr14 79066674 79067571 + 5.35707633222831 NA intron (NM_027906, intron 26 of 44) intron (NM_027906, intron 26 of 44) 132068 NR_152203 100043765 Mm.435553 NR_152203 ENSMUSG00000115111 Gm4632 - predicted gene 4632 ncRNA unique_peak2_16_52_-1.9110346176535_4.77240314573645_5.3570763322283 chr11 11808675 11809634 + 5.3570763322283 NA promoter-TSS (NM_001163359) promoter-TSS (NM_001163359) -192 NM_001163360 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding unique_peak2_3_28_-3.11383099176329_3.30106549924593_5.35253599412608 chr19 41676215 41676621 + 5.35253599412608 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 67438 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding unique_peak1_33_3_2.80983085733645_3.40491542866823_5.35253599412607 chr14 34526942 34527587 + 5.35253599412607 NA 3' UTR (NM_011918, exon 14 of 14) 3' UTR (NM_011918, exon 14 of 14) -4463 NM_030062 78243 Mm.117483 NM_030062 ENSMUSG00000021797 9230112D13Rik - RIKEN cDNA 9230112D13 gene protein-coding unique_peak1_33_3_2.80983085733645_3.40491542866823_5.35253599412607-2 chr19 6236497 6236892 + 5.35253599412607 NA promoter-TSS (NM_198168) promoter-TSS (NM_198168) -854 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak1_802_486_0.411662872716361_9.13360939844052_5.34367187672687 chr3 87148711 87153924 + 5.34367187672687 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 23430 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak2_22_61_-1.70428802901738_5.10205229587819_5.33766904318756 chr3 37918857 37919508 + 5.33766904318756 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 20369 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_73_19_1.60197766659684_5.12291692818578_5.33766904318754 chr3 19162354 19163056 + 5.33766904318754 NA intron (NM_001357689, intron 1 of 6) CpG 390 NM_028840 74252 Mm.200383 NM_028840 ENSMUSG00000027599 Armc1 2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik armadillo repeat containing 1 protein-coding unique_peak1_29_2_3.04557004447797_3.10774752296014_5.33257845442771-2 chr7 52595766 52596072 + 5.33257845442771 NA Intergenic Intergenic -580203 NM_001195601 100503036 Mm.279725 NM_001195601 ENSMUSG00000094445 1700015G11Rik Ccdc179 RIKEN cDNA 1700015G11 gene protein-coding unique_peak1_29_2_3.04557004447797_3.10774752296014_5.33257845442771 chr18 46484794 46485204 + 5.33257845442771 NA Intergenic Intergenic -19183 NR_045438 72076 Mm.82766 NM_028086 Mospd4 2010013H21Rik motile sperm domain containing 4 pseudo common_peak1_58_12_1.89896136718159_4.64992040173189_5.32350905908393 chr3 59138422 59139213 + 5.32350905908393 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) -6355 NM_001287120 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding unique_peak1_57_12_1.87447330323617_4.63767636975918_5.32350905908393 chr14 99548895 99549804 + 5.32350905908393 NA Intergenic Intergenic 250658 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak2_14_48_-1.97712231934283_4.62614868444379_5.32350905908392 chr5 53543084 53543476 + 5.32350905908392 NA Intergenic Intergenic -12499 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_45_92_-1.29630550931178_5.89100605645214_5.32255041932264 chr15 11829936 11831344 + 5.32255041932264 NA Intergenic Intergenic 75034 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_52_10_1.98633843663256_4.45260083695358_5.31930449647091 chr8 64019256 64020016 + 5.31930449647091 NA intron (NM_009390, intron 19 of 20) intron (NM_009390, intron 19 of 20) -67466 NM_001195687 244495 Mm.485331 NM_001195687 ENSMUSG00000094443 Sgo2b EG244495|Gm4975|Sgol2b shugoshin 2B protein-coding unique_peak1_55_11_1.93968161349752_4.55480330746992_5.31705276927178 chr14 77036347 77037028 + 5.31705276927178 NA promoter-TSS (NM_001310648) promoter-TSS (NM_001310648) -70 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_39_5_2.45767946267727_3.81380223205979_5.31420319710686 chr12 104894361 104894863 + 5.31420319710686 NA Intergenic Intergenic -29536 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak1_440_240_0.568030052444514_8.19690436245222_5.31251288566575 chr18 32396563 32399505 + 5.31251288566575 NA intron (NM_001360876, intron 1 of 17) (TC)n|Simple_repeat|Simple_repeat -19750 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak2_150_210_-0.775501284450146_7.33334854648211_5.29446939533413 chr13 32517730 32519961 + 5.29446939533413 NA Intergenic Intergenic -180301 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_146_57_1.04915777089269_6.38255988057392_5.27868738119585 chr14 121239792 121240560 + 5.27868738119585 NA intron (NM_134082, intron 11 of 26) intron (NM_134082, intron 11 of 26) -8530 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_69_17_1.67437601153025_5.00711300720744_5.256600851469 chr17 27556788 27557663 + 5.256600851469 NA intron (NM_001039356, intron 2 of 5) CpG-6152 572 NM_001166477 111241 Mm.426212 NM_001166476 ENSMUSG00000078249 Hmga1b Hmga1-rs1|Hmgi-rs1 high mobility group AT-hook 1B protein-coding common_peak1_239_112_0.789188644064208_7.21477328444729_5.23492514776138 chr14 65096836 65098085 + 5.23492514776138 NA intron (NM_018788, intron 1 of 6) intron (NM_018788, intron 1 of 6) 646 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak1_41_6_2.30517977396178_3.95994480903849_5.23041074693956 chr14 63426988 63427634 + 5.23041074693956 NA Intergenic Intergenic -9083 NM_177628 219148 Mm.37882 NM_177628 ENSMUSG00000035095 Fam167a A030013D21 family with sequence similarity 167, member A protein-coding unique_peak1_41_6_2.30517977396178_3.95994480903849_5.23041074693956-2 chr6 86668274 86668725 + 5.23041074693956 NA intron (NM_010751, intron 2 of 5) intron (NM_010751, intron 2 of 5) 660 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding unique_peak1_42_6_2.33888760815183_3.97679872613352_5.23041074693956 chr9 46013462 46014029 + 5.23041074693956 NA intron (NM_027498, intron 1 of 24) intron (NM_027498, intron 1 of 24) 925 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding unique_peak1_66_16_1.69409017639005_4.93450792944536_5.22068457343052 chr10 128743053 128744091 + 5.22068457343052 NA intron (NM_001358745, intron 3 of 25) intron (NM_001358745, intron 3 of 25) 504 NM_016811 13139 Mm.291235 NM_016811 ENSMUSG00000025357 Dgka 80kDa|AW146112|Dagk1 diacylglycerol kinase, alpha protein-coding common_peak1_66_16_1.69409017639005_4.93450792944536_5.22068457343052 chr11 60707564 60708589 + 5.22068457343052 NA intron (NM_008502, intron 11 of 20) intron (NM_008502, intron 11 of 20) 8386 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 LLGL1 scribble cell polarity complex component protein-coding common_peak2_34_77_-1.43404622631645_5.56837910570403_5.1971155953312 chr3 142438173 142439570 + 5.1971155953312 NA Intergenic B2_Mm1a|SINE|B2 -43175 NM_019808 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_164_68_0.964088467226981_6.59056869039166_5.19408822991985 chr14 46882358 46883806 + 5.19408822991985 NA 5' UTR (NM_028966, exon 1 of 12) 5' UTR (NM_028966, exon 1 of 12) 117 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak1_63_15_1.71593008507131_4.85796504253565_5.18845361146766 chr8 25465849 25466299 + 5.18845361146766 NA Intergenic Intergenic -52685 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_246_117_0.767908576274135_7.26659733749891_5.17689782757952 chr3 87172368 87174546 + 5.17689782757952 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 1290 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_183_79_0.906815247762403_6.77533571876856_5.16080261717836 chr11 74558543 74560173 + 5.16080261717836 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 30800 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_121_44_1.14824799339996_6.06597709302965_5.15706827495355 chr11 73176148 73176981 + 5.15706827495355 NA promoter-TSS (NM_029564) promoter-TSS (NM_029564) 444 NM_001168470 66048 Mm.73608 NM_025318 ENSMUSG00000047260 Emc6 0610009E20Rik|0610025L18Rik|Tmem93 ER membrane protein complex subunit 6 protein-coding unique_peak1_24_1_3.36935384172555_2.68467692086278_5.15699611159533-3 chr2 106002891 106003167 + 5.15699611159533 NA intron (NM_026992, intron 1 of 4) intron (NM_026992, intron 1 of 4) 520 NM_026992 99349 Mm.25661 NM_026992 ENSMUSG00000027166 Dnajc24 1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding unique_peak1_25_1_3.42553817445511_2.71276908722756_5.15699611159533 chr1 133961343 133961554 + 5.15699611159533 NA Intergenic Intergenic -40047 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding unique_peak1_24_1_3.36935384172555_2.68467692086278_5.15699611159533-2 chr15 25589900 25590211 + 5.15699611159533 NA Intergenic Intergenic -32495 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak1_24_1_3.36935384172555_2.68467692086278_5.15699611159533 chr1 170478003 170478223 + 5.15699611159533 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 78997 NM_027528 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak1_25_1_3.42553817445511_2.71276908722756_5.15699611159533-3 chr2 84623659 84624115 + 5.15699611159533 NA intron (NM_001355067, intron 1 of 15) intron (NM_001355067, intron 1 of 15) 25593 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding unique_peak1_25_1_3.42553817445511_2.71276908722756_5.15699611159533-2 chr1 162235291 162235676 + 5.15699611159533 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 12115 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA unique_peak1_24_1_3.36935384172555_2.68467692086278_5.15699611159533-4 chr5 43234815 43235109 + 5.15699611159533 NA exon (NM_175937, exon 1 of 11) exon (NM_175937, exon 1 of 11) 392 NR_028417 665934 Mm.381491 NR_028417 ENSMUSG00000085720 Gm7854 EG665934 predicted gene 7854 ncRNA unique_peak1_24_1_3.36935384172555_2.68467692086278_5.15699611159533-5 chr7 88473858 88474175 + 5.15699611159533 NA intron (NM_028238, intron 2 of 2) intron (NM_028238, intron 2 of 2) 43743 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding common_peak1_226_105_0.801671855531646_7.12875638232902_5.15595550442233 chr18 61045104 61046630 + 5.15595550442233 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 717 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak2_22_60_-1.68082905619339_5.09032280946619_5.15525288229597 chr11 43528790 43529501 + 5.15525288229597 NA intron (NM_001045530, intron 1 of 5) CpG 396 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding common_peak1_145_57_1.03937946086511_6.37767072556013_5.14703487627751 chr14 70518571 70520725 + 5.14703487627751 NA intron (NR_033241, intron 1 of 19) intron (NR_033241, intron 1 of 19) 612 NM_009755 12153 Mm.27757 NM_009755 ENSMUSG00000022098 Bmp1 Pcp|Tld bone morphogenetic protein 1 protein-coding common_peak2_103_158_-0.901454739975732_6.86215558529649_5.13742288213515 chr15 79741580 79742952 + 5.13742288213515 NA promoter-TSS (NR_045069) promoter-TSS (NR_045069) 270 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding unique_peak1_46_8_2.10373630185974_4.22179315237218_5.13708003886138-2 chr4 34777720 34778276 + 5.13708003886138 NA intron (NM_001330755, intron 1 of 3) intron (NM_001330755, intron 1 of 3) 368 NR_138487 66291 Mm.28071 NM_025471 ENSMUSG00000028295 Smim8 1810030N24Rik|2810406B13Rik small integral membrane protein 8 protein-coding unique_peak1_46_8_2.10373630185974_4.22179315237218_5.13708003886138 chr11 88619744 88620431 + 5.13708003886138 NA intron (NR_131025, intron 1 of 2) intron (NR_131025, intron 1 of 2) 836 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_33_75_-1.43809665610713_5.52887918539002_5.13490503638094 chr8 64583242 64584161 + 5.13490503638094 NA Intergenic B4|SINE|B4 -69260 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak1_90_28_1.36216124932843_5.53906161979179_5.13490503638093 chr5 21737079 21737647 + 5.13490503638093 NA intron (NM_028431, intron 1 of 12) CpG 203 NM_028431 73078 Mm.301655 NM_028431 ENSMUSG00000029017 Pmpcb 3110004O18Rik|MPP11|MPPB|MPPP52 peptidase (mitochondrial processing) beta protein-coding unique_peak2_26_65_-1.56479228888505_5.26199797491593_5.12513180048471 chr19 24731550 24732290 + 5.12513180048471 NA intron (NM_175013, intron 8 of 10) intron (NM_175013, intron 8 of 10) 57912 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_84_25_1.42199305837599_5.41143624732909_5.12050009910058 chr6 7692341 7693171 + 5.12050009910058 NA intron (NM_012055, intron 1 of 11) intron (NM_012055, intron 1 of 11) 426 NM_012055 27053 Mm.2942 NM_012055 ENSMUSG00000029752 Asns - asparagine synthetase protein-coding common_peak1_85_25_1.4387478324951_5.41981363438864_5.12050009910058 chr12 80644340 80645013 + 5.12050009910058 NA promoter-TSS (NM_001347409) promoter-TSS (NM_001347409) 461 NM_026244 328133 Mm.238279 NM_026244 ENSMUSG00000048833 Slc39a9 2010002A02Rik|2610511I23Rik|4833420E20Rik|AW209151 solute carrier family 39 (zinc transporter), member 9 protein-coding unique_peak1_56_12_1.84955933863151_4.62521938745685_5.12030532850258 chr10 12788257 12789153 + 5.12030532850258 NA intron (NM_011682, intron 1 of 73) ID_B1|SINE|B4 73030 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-10 chr3 122323944 122324222 + 5.11750992628768 NA Intergenic Intergenic -30380 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-7 chr2 8276841 8277083 + 5.11750992628768 NA Intergenic Intergenic -880764 NM_001110231 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-4 chr14 120637338 120637774 + 5.11750992628768 NA Intergenic Intergenic 159095 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-11 chr3 146723246 146723539 + 5.11750992628768 NA Intergenic Intergenic 46846 NM_001164198 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-8 chr2 20581605 20581883 + 5.11750992628768 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 62231 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-12 chr7 143052383 143052601 + 5.11750992628768 NA promoter-TSS (NM_133655) promoter-TSS (NM_133655) -258 NM_133655 12520 Mm.806 NM_133655 ENSMUSG00000037706 Cd81 Tapa-1|Tapa1|Tspan28 CD81 antigen protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-3 chr14 76927585 76928071 + 5.11750992628768 NA Intergenic Intergenic 108789 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768 chr10 70643490 70643695 + 5.11750992628768 NA intron (NR_045291, intron 1 of 5) intron (NR_045291, intron 1 of 5) 8333 NR_045291 319646 Mm.483039 NR_045291 ENSMUSG00000037747 D630013N20Rik - RIKEN cDNA D630013N20 gene ncRNA unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-6 chr16 30390069 30390292 + 5.11750992628768 NA Intergenic Intergenic -1650 NM_001128096 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-2 chr10 93939873 93940154 + 5.11750992628768 NA Intergenic Intergenic 23850 NR_029764 723908 NR_029764 ENSMUSG00000065607 Mir331 Mirn331|mmu-mir-331 microRNA 331 ncRNA unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-5 chr15 31092188 31092382 + 5.11750992628768 NA Intergenic Intergenic 53159 NR_045186 73784 Mm.66947 NR_045186 ENSMUSG00000115474 4930430F21Rik - RIKEN cDNA 4930430F21 gene ncRNA unique_peak1_18_0_3.97621843411839_1.9881092170592_5.11750992628768-9 chr2 165906914 165907183 + 5.11750992628768 NA Intergenic B1_Mur3|SINE|Alu -22210 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_244_116_0.768540363390041_7.25463490127843_5.10654314194802 chr3 84581447 84583721 + 5.10654314194802 NA promoter-TSS (NM_001081093) promoter-TSS (NM_001081093) 41 NM_001293801 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding common_peak2_100_155_-0.915904319604835_6.82745005905983_5.10574806785094 chr1 156221388 156222498 + 5.10574806785094 NA Intergenic Intergenic -16917 NM_177838 329274 Mm.150857 NM_177838 ENSMUSG00000015484 Fam163a A230106N23Rik family with sequence similarity 163, member A protein-coding unique_peak2_35_78_-1.4120694995044_5.5977459984249_5.0995205862307 chr5 113872448 113873075 + 5.0995205862307 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 35945 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak1_32_3_2.76706598439776_3.38353299219888_5.09647762044519-2 chr3 98385856 98386179 + 5.09647762044519 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 3536 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding unique_peak1_32_3_2.76706598439776_3.38353299219888_5.09647762044519 chr2 166445670 166446121 + 5.09647762044519 NA Intergenic Intergenic -1556 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_112_39_1.20839460677289_5.92612539827381_5.09341948656499 chr2 93906576 93907544 + 5.09341948656499 NA Intergenic Intergenic -37903 NM_001033452 381411 Mm.9889 NM_001033452 ENSMUSG00000075023 Accsl Gm1967 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like protein-coding unique_peak1_38_5_2.42141127596141_3.79566813870186_5.07532537266956 chr16 37802103 37802711 + 5.07532537266956 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 25352 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding unique_peak1_38_5_2.42141127596141_3.79566813870186_5.07532537266956-2 chr2 60652846 60653273 + 5.07532537266956 NA intron (NM_021359, intron 6 of 14) intron (NM_021359, intron 6 of 14) 20634 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_28_2_2.99700550022935_3.08346525083583_5.06563262809273-2 chr19 60949990 60950346 + 5.06563262809273 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 60419 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak1_28_2_2.99700550022935_3.08346525083583_5.06563262809273 chr12 93928983 93929283 + 5.06563262809273 NA Intergenic Intergenic 1795 NR_106175 102465890 NR_106175 ENSMUSG00000098498 Mir8099-1 Gm27917|mmu-mir-8099-1 microRNA 8099-1 ncRNA unique_peak1_28_2_2.99700550022935_3.08346525083583_5.06563262809273-4 chr6 97306254 97306538 + 5.06563262809273 NA intron (NM_145148, intron 17 of 23) intron (NM_145148, intron 17 of 23) -53616 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_28_2_2.99700550022935_3.08346525083583_5.06563262809273-3 chr3 93554001 93554274 + 5.06563262809273 NA promoter-TSS (NM_009112) promoter-TSS (NM_009112) -980 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak1_82_24_1.44446743111619_5.36608990533282_5.06298534606179 chr14 48446136 48446716 + 5.06298534606179 NA promoter-TSS (NM_172600) promoter-TSS (NM_172600) 74 NR_132324 218989 Mm.85211 NM_172600 ENSMUSG00000036339 Tmem260 5930435P15|6720456H20Rik transmembrane protein 260 protein-coding common_peak1_82_24_1.44446743111619_5.36608990533282_5.06298534606179 chr4 40279028 40279849 + 5.06298534606179 NA promoter-TSS (NM_001033305) promoter-TSS (NM_001033305) -17 NM_001033305 230075 Mm.1103 NM_001033305 ENSMUSG00000071014 Ndufb6 CI-B17|Gm137 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 protein-coding common_peak2_79_131_-1.00880713553327_6.53999055159182_5.04653206430285 chr1 132310975 132312325 + 5.04653206430285 NA Intergenic Intergenic -4475 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_462_514_-0.457771191867238_8.77954302613696_5.03979919988938 chr1 43166994 43172050 + 5.03979919988938 NA intron (NM_001289533, intron 1 of 5) (A)n|Simple_repeat|Simple_repeat -5561 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_252_122_0.742419175263035_7.31372409297076_5.02479457438395 chr3 51415404 51417013 + 5.02479457438395 NA 5' UTR (NM_053089, exon 1 of 20) 5' UTR (NM_053089, exon 1 of 20) 192 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding common_peak1_124_46_1.12031192965531_6.11474481650529_5.01881325254751 chr9 44726667 44727568 + 5.01881325254751 NA exon (NM_153537, exon 3 of 22) exon (NM_153537, exon 3 of 22) 8081 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_129_185_-0.808073697045527_7.13512196258527_5.01709041160657 chr6 91684116 91685995 + 5.01709041160657 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 988 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_217_100_0.813428422803407_7.0649256941535_5.01071090977429 chr14 66263117 66266121 + 5.01071090977429 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 16433 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_80_23_1.46841995240646_5.31917247692438_5.00662899252903 chr14 20159027 20160094 + 5.00662899252903 NA intron (NM_021542, intron 1 of 4) L3b|LINE|CR1 22222 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_40_6_2.27065962511608_3.94268473461564_4.99902085084327 chr11 86953016 86953487 + 4.99902085084327 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 40511 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak2_198_89_0.849155256018277_6.91643072433881_4.97859776288609 chr19 42021783 42023003 + 4.97859776288609 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -13645 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding common_peak1_133_51_1.07405831992605_6.23746887810412_4.97219933347577 chr2 33216071 33217477 + 4.97219933347577 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 813 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_132_51_1.06332780640494_6.23210362134356_4.97219933347577 chr4 155694478 155696916 + 4.97219933347577 NA 3' UTR (NM_178699, exon 1 of 1) 3' UTR (NM_178699, exon 1 of 1) 1355 NM_178699 230991 Mm.29083 NM_178699 ENSMUSG00000074738 Fndc10 B930041F14Rik|MNCb-3966 fibronectin type III domain containing 10 protein-coding unique_peak1_60_14_1.74026547369436_4.7770233324557_4.96572409948628 chr15 51802676 51803493 + 4.96572409948628 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 62377 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_679_713_-0.378512426231746_9.29052405091323_4.94203051704709 chr15 64380604 64384860 + 4.94203051704709 NA 5' UTR (NM_001276467, exon 1 of 30) 5' UTR (NM_001276467, exon 1 of 30) 187 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_34_4_2.52942789765844_3.58664204371658_4.94184174098665 chr11 68872750 68873248 + 4.94184174098665 NA Intergenic Intergenic -15554 NM_177060 320040 Mm.305696 NM_177060 ENSMUSG00000046490 Rnf222 9930039A11Rik ring finger protein 222 protein-coding unique_peak1_34_4_2.52942789765844_3.58664204371658_4.94184174098665-2 chr14 54481179 54481742 + 4.94184174098665 NA Intergenic Intergenic 5360 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak2_208_266_-0.649452098336387_7.73596988251936_4.92883076222663 chr19 10781137 10783680 + 4.92883076222663 NA non-coding (NR_027805, exon 2 of 4) non-coding (NR_027805, exon 2 of 4) 41461 NR_027805 403202 Mm.34482 NM_207529 ENSMUSG00000067577 A430093F15Rik Gm674 RIKEN cDNA A430093F15 gene ncRNA common_peak2_132_188_-0.79847489967504_7.16300497438355_4.91943719775405 chr8 72145957 72148307 + 4.91943719775405 NA intron (NM_001001491, intron 6 of 7) intron (NM_001001491, intron 6 of 7) 11840 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding unique_peak1_45_8_2.07292830035394_4.20638915161928_4.91804610622904 chr15 95828856 95829221 + 4.91804610622904 NA intron (NR_155276, intron 1 of 1) intron (NR_155276, intron 1 of 1) 1034 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA unique_peak1_48_9_2.01143004847869_4.32764311912671_4.90247409987431 chr1 34439887 34440340 + 4.90247409987431 NA promoter-TSS (NM_027159) promoter-TSS (NM_027159) 284 NM_178601 27993 Mm.289667 NM_178601 ENSMUSG00000026127 Imp4 AA409888|AV031295|D1Wsu40e IMP4, U3 small nucleolar ribonucleoprotein protein-coding common_peak2_10_40_-2.16426664287453_4.27541868318082_4.9024740998743 chr13 32964335 32964814 + 4.9024740998743 NA promoter-TSS (NM_011454) promoter-TSS (NM_011454) -939 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_101_34_1.2543284630457_5.75644724846781_4.89755851069969 chr14 73384526 73385226 + 4.89755851069969 NA intron (NM_008410, intron 1 of 5) CpG 413 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak1_575_336_0.466886549197868_8.63004805578079_4.89707753480519 chr3 95658156 95662519 + 4.89707753480519 NA intron (NM_008562, intron 2 of 2) intron (NM_008562, intron 2 of 2) 1616 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_28_67_-1.50549484029983_5.33471542110042_4.89407448190068 chr6 112696111 112696939 + 4.89407448190068 NA intron (NM_001167730, intron 1 of 13) CpG 145 NM_021385 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak2_20_55_-1.68776524646498_4.96347229882511_4.88482952603337 chrX 73786227 73786887 + 4.88482952603337 NA promoter-TSS (NM_001166480) promoter-TSS (NM_001166480) 340 NM_008323 15929 Mm.14825 NM_008323 ENSMUSG00000002010 Idh3g - isocitrate dehydrogenase 3 (NAD+), gamma protein-coding unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749-5 chr4 139200212 139200526 + 4.8766546284749 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 6258 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749-2 chr14 70135047 70135560 + 4.8766546284749 NA intron (NM_021328, intron 8 of 8) intron (NM_021328, intron 8 of 8) 18488 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749-7 chr8 94295744 94296079 + 4.8766546284749 NA intron (NM_001357268, intron 5 of 20) intron (NM_001357268, intron 5 of 20) 27305 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749-4 chr3 102465945 102466277 + 4.8766546284749 NA Intergenic Intergenic -3808 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749-6 chr7 140058017 140058300 + 4.8766546284749 NA Intergenic CpG -9070 NM_001347609 17703 Mm.4816 NM_010836 ENSMUSG00000025469 Msx3 AI323377 msh homeobox 3 protein-coding unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749-3 chr15 102979954 102980214 + 4.8766546284749 NA TTS (NR_155438) TTS (NR_155438) 979 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA unique_peak1_23_1_3.31087564644525_2.65543782322262_4.8766546284749 chr12 73448450 73448726 + 4.8766546284749 NA Intergenic Intergenic -39025 NR_046013 380765 Mm.490476 NR_046013 ENSMUSG00000056359 D830013O20Rik Gm891 RIKEN cDNA D830013O20 gene ncRNA common_peak1_90_29_1.31325164884748_5.56351642003226_4.87581895109211 chr13 12812890 12813754 + 4.87581895109211 NA Intergenic Intergenic -13243 NM_011118 18812 Mm.457984 NM_011118 ENSMUSG00000056457 Prl2c3 Ghd1|MRP-2|MRP-3|Mrpplf3|PLF-2|PLF-3|Plf2|Prl2c4|mrp/plf3 prolactin family 2, subfamily c, member 3 protein-coding common_peak1_206_95_0.812507025956763_6.99121601369954_4.866107739471 chr3 38936693 38938412 + 4.866107739471 NA intron (NM_183221, intron 1 of 16) intron (NM_183221, intron 1 of 16) 50612 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_94_31_1.28176537372578_5.64088268686289_4.84940276622989-2 chr3 31495658 31496519 + 4.84940276622989 NA Intergenic Intergenic -185769 NM_172861 241919 Mm.285366 NM_172861 ENSMUSG00000069072 Slc7a14 A930013N06|BC061928 solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 protein-coding common_peak1_94_31_1.28176537372578_5.64088268686289_4.84940276622989 chr11 117255749 117257080 + 4.84940276622989 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -9832 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_364_195_0.595252531058109_7.91233610964426_4.84484092343806 chr19 10041590 10043876 + 4.84484092343806 NA intron (NM_021890, intron 1 of 11) intron (NM_021890, intron 1 of 11) 1185 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding unique_peak1_30_3_2.67750451912603_3.33875225956301_4.84202874224997 chr11 113063457 113063790 + 4.84202874224997 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 138215 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak1_30_3_2.67750451912603_3.33875225956301_4.84202874224997-3 chr2 166447597 166448222 + 4.84202874224997 NA non-coding (NR_015558, exon 1 of 3) non-coding (NR_015558, exon 1 of 3) 458 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA unique_peak1_31_3_2.72298506464455_3.36149253232228_4.84202874224997 chr14 47303100 47303727 + 4.84202874224997 NA intron (NM_178684, intron 1 of 3) intron (NM_178684, intron 1 of 3) 5139 NM_001360542 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding unique_peak1_30_3_2.67750451912603_3.33875225956301_4.84202874224997-4 chr9 35175585 35175986 + 4.84202874224997 NA exon (NM_027030, exon 1 of 6) exon (NM_027030, exon 1 of 6) 202 NM_027030 69305 Mm.229110 NM_027030 ENSMUSG00000032040 Dcps 1700001E16Rik|AA408441 decapping enzyme, scavenger protein-coding unique_peak1_30_3_2.67750451912603_3.33875225956301_4.84202874224997-2 chr16 14482390 14482658 + 4.84202874224997 NA Intergenic Intergenic -79793 NR_033556 545280 Mm.123679 NR_033556 A630010A05Rik - RIKEN cDNA A630010A05 gene ncRNA unique_peak1_30_3_2.67750451912603_3.33875225956301_4.84202874224997-5 chrX 145504408 145504757 + 4.84202874224997 NA Intergenic Intergenic -16943 NM_153319 27494 Mm.100068 NM_153319 ENSMUSG00000041688 Amot CAG-2|D0Kist1|Sii6 angiomotin protein-coding unique_peak1_36_5_2.34599824033629_3.7579616208893_4.83828234248751 chr15 25494434 25494713 + 4.83828234248751 NA Intergenic Intergenic 80381 NR_027376 432939 Mm.146555 NM_001013791 Gm5468 100040583|EG432939 predicted gene 5468 ncRNA unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-3 chr15 54241157 54241453 + 4.8164799306237 NA Intergenic Intergenic 37179 NM_008764 18383 Mm.15383 NM_008764 ENSMUSG00000063727 Tnfrsf11b OCIF|Opg|TR1 tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-10 chr8 24415576 24415768 + 4.8164799306237 NA Intergenic Intergenic 23274 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-12 chr9 43753822 43754107 + 4.8164799306237 NA intron (NM_021424, intron 1 of 5) intron (NM_021424, intron 1 of 5) 9388 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-11 chr8 85538373 85538575 + 4.8164799306237 NA 3' UTR (NM_019794, exon 9 of 9) 3' UTR (NM_019794, exon 9 of 9) 16797 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-2 chr14 62384005 62384281 + 4.8164799306237 NA Intergenic Intergenic 52075 NM_026001 67153 Mm.26040 NM_026001 ENSMUSG00000021932 Rnaseh2b 1110019N06Rik|2610207P08Rik|Dleu8 ribonuclease H2, subunit B protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-4 chr16 26627404 26627652 + 4.8164799306237 NA intron (NR_152416, intron 2 of 12) intron (NR_152416, intron 2 of 12) 45823 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237 chr14 48226735 48227047 + 4.8164799306237 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 28175 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-9 chr6 146942056 146942378 + 4.8164799306237 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) 12204 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-5 chr18 13250210 13250653 + 4.8164799306237 NA Intergenic Intergenic 243441 NM_153087 225192 Mm.207073 NM_153087 ENSMUSG00000037346 Hrh4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-6 chr3 103914107 103914329 + 4.8164799306237 NA promoter-TSS (NM_001356556) promoter-TSS (NM_001356556) 98 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|KDM9|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-7 chr5 139799199 139799415 + 4.8164799306237 NA intron (NM_010757, intron 2 of 2) intron (NM_010757, intron 2 of 2) 7771 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding unique_peak1_17_0_3.89876622824595_1.94938311412297_4.8164799306237-8 chr6 97354480 97354802 + 4.8164799306237 NA intron (NM_145148, intron 6 of 23) intron (NM_145148, intron 6 of 23) -101861 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak2_56_102_-1.13650147041062_6.11824979197791_4.81556219886268 chr1 186703537 186704815 + 4.81556219886268 NA intron (NM_001329107, intron 1 of 7) intron (NM_001329107, intron 1 of 7) 1813 NM_009367 21808 Mm.18213 NM_009367 ENSMUSG00000039239 Tgfb2 BB105277|Tgf-beta2|Tgfb-2 transforming growth factor, beta 2 protein-coding common_peak1_157_66_0.94442349624426_6.5383009385799_4.80110230881571 chr3 107763792 107764869 + 4.80110230881571 NA Intergenic Intergenic -3861 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_27_2_2.94673659307077_3.05833079725654_4.80007989019517 chr15 61441507 61442056 + 4.80007989019517 NA Intergenic Intergenic 332670 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_27_2_2.94673659307077_3.05833079725654_4.80007989019517-2 chr5 33334945 33335146 + 4.80007989019517 NA promoter-TSS (NM_021500) promoter-TSS (NM_021500) -527 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak1_199_91_0.824626946948807_6.93587542953142_4.79423109191558 chr4 139247489 139250436 + 4.79423109191558 NA intron (NM_001037761, intron 2 of 9) intron (NM_001037761, intron 2 of 9) 54851 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_29_68_-1.47799191157904_5.36952850098865_4.78701165772328 chr2 13553770 13555088 + 4.78701165772328 NA Intergenic Intergenic -9765 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding unique_peak1_39_6_2.23528704134083_3.92499844272802_4.76954767079794 chr6 71926588 71927384 + 4.76954767079794 NA intron (NM_009088, intron 9 of 33) intron (NM_009088, intron 9 of 33) 17933 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak1_95_32_1.25237156794031_5.67057990332861_4.76184838722877 chr3 96268652 96269502 + 4.76184838722877 NA promoter-TSS (NM_175666) promoter-TSS (NM_175666) 423 NM_178215 319154 Mm.383293 NM_178215 ENSMUSG00000074403 Hist2h3b H3-615|H3-616 histone cluster 2, H3b protein-coding common_peak2_356_191_0.593253049270391_7.88158902535635_4.75746870923898 chr3 57293136 57295836 + 4.75746870923898 NA intron (NM_001355130, intron 2 of 5) intron (NM_001355130, intron 2 of 5) 7502 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_318_166_0.633289107709235_7.70034884632867_4.75606439316689 chr19 4231017 4233119 + 4.75606439316689 NA promoter-TSS (NR_132280) promoter-TSS (NR_132280) 175 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak1_125_48_1.07160547455838_6.1505125813944_4.75285383831749 chr15 101940726 101941924 + 4.75285383831749 NA Intergenic Intergenic -1001 NM_146063 223917 Mm.162744 NM_146063 ENSMUSG00000061397 Krt79 BC031593 keratin 79 protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268-7 chr8 36187802 36188203 + 4.7418463123268 NA Intergenic Intergenic 31992 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak2_0_18_-4.48966755093281_2.00309373797718_4.7418463123268 chr10 17732885 17733157 + 4.7418463123268 NA Intergenic Intergenic 9793 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268-4 chr17 29092857 29093070 + 4.7418463123268 NA promoter-TSS (NM_007669) promoter-TSS (NM_007669) -806 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding unique_peak2_0_18_-4.48966755093281_2.00309373797718_4.7418463123268-2 chr15 79460047 79460489 + 4.7418463123268 NA Intergenic Intergenic -18125 NM_001359863 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268-5 chr17 83313138 83313413 + 4.7418463123268 NA Intergenic Intergenic -37656 NM_001114361 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268-2 chr11 118372844 118373159 + 4.7418463123268 NA Intergenic Intergenic -17590 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268-3 chr13 70784219 70784535 + 4.7418463123268 NA intron (NM_172053, intron 9 of 22) intron (NM_172053, intron 9 of 22) 57434 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268 chr1 54888117 54888395 + 4.7418463123268 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 38131 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak1_21_1_3.1862303821703_2.59311519108515_4.7418463123268-6 chr8 34588872 34589262 + 4.7418463123268 NA TTS (NR_040706) TTS (NR_040706) 51249 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_103_36_1.20197484967967_5.81044079046879_4.73612837605245 chr6 146961668 146963018 + 4.73612837605245 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -7922 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_435_243_0.533847588419071_8.19766113177242_4.73493209250704 chr18 32396445 32399396 + 4.73493209250704 NA intron (NM_001360876, intron 1 of 17) intron (NM_001360876, intron 1 of 17) -19636 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak2_45_88_-1.23288012917014_5.85929336638133_4.73037258516631 chr1 132127918 132129006 + 4.73037258516631 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 11223 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak2_8_35_-2.26410379362312_4.03787310463075_4.72588744919881 chr1 194940600 194941367 + 4.72588744919881 NA intron (NM_001111059, intron 1 of 7) intron (NM_001111059, intron 1 of 7) 2162 NM_133654 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding unique_peak1_73_21_1.4644741428469_5.19166869006075_4.72447886971477 chr14 66816795 66817801 + 4.72447886971477 NA intron (NM_009955, intron 8 of 13) intron (NM_009955, intron 8 of 13) 51302 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_54_12_1.79839258320985_4.59963600974602_4.71961104764085-2 chr8 26812898 26813189 + 4.71961104764085 NA Intergenic Intergenic 11380 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak1_54_12_1.79839258320985_4.59963600974602_4.71961104764085 chr3 19957133 19957799 + 4.71961104764085 NA intron (NM_001276248, intron 1 of 19) intron (NM_001276248, intron 1 of 19) 412 NM_001276248 12870 Mm.13787 NM_007752 ENSMUSG00000003617 Cp D3Ertd555e ceruloplasmin protein-coding unique_peak2_14_45_-1.88597443128464_4.58057474041469_4.71961104764084 chr12 9175545 9176306 + 4.71961104764084 NA Intergenic Intergenic 145928 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding common_peak1_89_29_1.29742257224482_5.55560188173093_4.71757460358329 chr6 31317234 31318136 + 4.71757460358329 NA intron (NR_040261, intron 3 of 4) intron (NR_040261, intron 3 of 4) 81088 NR_040300 100503869 Mm.370532 NR_040300 ENSMUSG00000086212 Mkln1os Gm13845 muskelin 1, intracellular mediator containing kelch motifs, opposite strand ncRNA unique_peak2_34_74_-1.37746269795008_5.54008734152084_4.71757460358329 chr8 36692100 36692750 + 4.71757460358329 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 40629 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_159_68_0.920007547473773_6.56852823051506_4.70738272219382 chr3 37359571 37360774 + 4.70738272219382 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 11519 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak1_65_17_1.5900860033822_4.96496800313341_4.70171162262326 chr8 92356773 92357402 + 4.70171162262326 NA promoter-TSS (NM_018826) promoter-TSS (NM_018826) -709 NM_018826 54352 Mm.101153 NM_018826 ENSMUSG00000031737 Irx5 - Iroquois homeobox 5 protein-coding unique_peak2_19_54_-1.73166277055299_4.91552832824817_4.70171162262325 chr12 95695190 95696008 + 4.70171162262325 NA intron (NM_201518, intron 1 of 1) CpG 3373 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak1_33_4_2.48790276244909_3.56587947611191_4.69785539356838-4 chr5 125044371 125044733 + 4.69785539356838 NA intron (NM_011424, intron 21 of 46) intron (NM_011424, intron 21 of 46) 41077 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_33_4_2.48790276244909_3.56587947611191_4.69785539356838-5 chr7 68180746 68181124 + 4.69785539356838 NA intron (NM_010513, intron 5 of 20) intron (NM_010513, intron 5 of 20) 83298 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak1_33_4_2.48790276244909_3.56587947611191_4.69785539356838-3 chr4 47149749 47150481 + 4.69785539356838 NA Intergenic Intergenic -57897 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak1_33_4_2.48790276244909_3.56587947611191_4.69785539356838-2 chr14 62992219 62992691 + 4.69785539356838 NA Intergenic Intergenic -5622 NM_001039125 654465 Mm.424929 NM_001039125 ENSMUSG00000075573 Defb47 Defb41|EG654465 defensin beta 47 protein-coding unique_peak1_33_4_2.48790276244909_3.56587947611191_4.69785539356838 chr1 155086571 155087138 + 4.69785539356838 NA Intergenic Intergenic -3590 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_49_10_1.90286724351501_4.4108652403948_4.69161891904143 chr8 83740849 83741603 + 4.69161891904143 NA promoter-TSS (NM_001163031) promoter-TSS (NM_001163031) 85 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_170_74_0.894960988930933_6.67629918496135_4.67776803505234 chr8 92849780 92850685 + 4.67776803505234 NA exon (NM_008610, exon 12 of 13) exon (NM_008610, exon 12 of 13) -5101 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak1_97_33_1.23884032254247_5.70688300252158_4.67771436739319 chr14 63859754 63860918 + 4.67771436739319 NA promoter-TSS (NM_028228) promoter-TSS (NM_028228) 24 NM_028228 72400 Mm.379214 NM_028228 ENSMUSG00000021958 Pinx1 2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1 PIN2/TERF1 interacting, telomerase inhibitor 1 protein-coding common_peak2_39_80_-1.29720803948619_5.69124598314153_4.67771436739319 chr13 23761427 23762242 + 4.67771436739319 NA promoter-TSS (NM_178192) promoter-TSS (NM_178192) 552 NM_013550 360198 Mm.221301 NM_013550 ENSMUSG00000069265 Hist1h3a - histone cluster 1, H3a protein-coding unique_peak1_62_16_1.6059074569965_4.89041656974859_4.65855722829497 chr16 13356727 13357762 + 4.65855722829497 NA intron (NM_001122667, intron 3 of 16) intron (NM_001122667, intron 3 of 16) -1177 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_152_64_0.942079269189663_6.49340744762329_4.65368814838911 chr19 29805563 29807119 + 4.65368814838911 NA promoter-TSS (NM_172836) promoter-TSS (NM_172836) -332 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding unique_peak2_33_72_-1.37999370154357_5.49982770810823_4.65239418269557 chr2 37796475 37797559 + 4.65239418269557 NA 3' UTR (NM_001163566, exon 13 of 13) 3' UTR (NM_001163566, exon 13 of 13) 20768 NM_001163566 241324 Mm.392369 NM_001163566 ENSMUSG00000035403 Crb2 5930402A21|BC043114 crumbs family member 2 protein-coding common_peak2_108_159_-0.843233209758917_6.9003114900079_4.65030543377865 chr8 94011785 94012550 + 4.65030543377865 NA intron (NM_011787, intron 1 of 13) CpG 473 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak1_131_52_1.02503557068807_6.24043823990723_4.6485715385532 chr2 128686599 128687999 + 4.6485715385532 NA promoter-TSS (NM_008569) promoter-TSS (NM_008569) 96 NM_008569 17222 Mm.277408 NM_008569 ENSMUSG00000014355 Anapc1 2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24 anaphase promoting complex subunit 1 protein-coding common_peak1_68_19_1.50176080913635_5.07280849945554_4.61866184422219 chr13 91370591 91371346 + 4.61866184422219 NA non-coding (NR_045161, exon 3 of 3) non-coding (NR_045161, exon 3 of 3) 17117 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA unique_peak1_60_15_1.64715606930288_4.82357803465144_4.61848063467331 chr16 4077542 4078186 + 4.61848063467331 NA promoter-TSS (NM_026508) promoter-TSS (NM_026508) -54 NM_026508 68015 Mm.123366 NM_026508 ENSMUSG00000005981 Trap1 2410002K23Rik|HSP75 TNF receptor-associated protein 1 protein-coding common_peak1_60_15_1.64715606930288_4.82357803465144_4.61848063467331 chr10 79960215 79960697 + 4.61848063467331 NA intron (NM_175450, intron 1 of 9) CpG 304 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding unique_peak1_60_15_1.64715606930288_4.82357803465144_4.61848063467331-2 chr18 75649986 75651039 + 4.61848063467331 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 47184 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak1_136_55_0.998860652058176_6.30678524808669_4.61175505114613 chr3 21986172 21987587 + 4.61175505114613 NA Intergenic Intergenic -89773 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_75_22_1.43854651891489_5.24283521551446_4.60967332922064 chr11 103686255 103687049 + 4.60967332922064 NA exon (NM_019650, exon 4 of 6) exon (NM_019650, exon 4 of 6) 11058 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak2_167_73_0.888971371243942_6.65393905125092_4.60456368019803 chr15 102966754 102967918 + 4.60456368019803 NA exon (NM_010462, exon 1 of 2) exon (NM_010462, exon 1 of 2) 540 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding unique_peak1_35_5_2.30674874795155_3.73833687469693_4.60318595491365-2 chr3 122888220 122888567 + 4.60318595491365 NA intron (NR_046036, intron 5 of 5) intron (NR_046036, intron 5 of 5) -6679 NM_007980 14079 Mm.28398 NM_007980 ENSMUSG00000023057 Fabp2 Fabpi|I-FABP fatty acid binding protein 2, intestinal protein-coding unique_peak1_35_5_2.30674874795155_3.73833687469693_4.60318595491365 chr16 45111424 45111918 + 4.60318595491365 NA intron (NM_026439, intron 3 of 7) intron (NM_026439, intron 3 of 7) 17660 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-5 chr2 168414864 168415265 + 4.59734841376773 NA Intergenic RSINE1|SINE|B4 -145733 NM_001081134 241794 Mm.425102 NM_001081134 ENSMUSG00000074575 Kcng1 AW536275 potassium voltage-gated channel, subfamily G, member 1 protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-4 chr2 150841624 150841956 + 4.59734841376773 NA intron (NR_151505, intron 6 of 12) intron (NR_151505, intron 6 of 12) 780 NM_001356550 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-3 chr19 16970494 16970788 + 4.59734841376773 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 14523 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-9 chr8 109147954 109148157 + 4.59734841376773 NA non-coding (NR_151498, exon 4 of 5) non-coding (NR_151498, exon 4 of 5) 72833 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-7 chr5 4246452 4246700 + 4.59734841376773 NA Intergenic Intergenic 54209 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b Gm9897 mitochondrial transcription termination factor 1b protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-6 chr4 137117214 137117649 + 4.59734841376773 NA Intergenic Intergenic 47635 NR_040443 100503595 Mm.421314 NR_040443 ENSMUSG00000085833 Gm13003 - predicted gene 13003 ncRNA unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-2 chr13 33823877 33824385 + 4.59734841376773 NA Intergenic Intergenic 19277 NM_001045535 435350 Mm.263418 NM_001045535 ENSMUSG00000069248 Serpinb6e Gm11396|SPI3B|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6e protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773 chr1 90233726 90234114 + 4.59734841376773 NA Intergenic Intergenic 29940 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak1_22_1_3.2499082813695_2.62495414068475_4.59734841376773-8 chr6 146981647 146981884 + 4.59734841376773 NA intron (NM_001355729, intron 5 of 27) intron (NM_001355729, intron 5 of 27) -27344 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak1_98_34_1.211563590107_5.73506481199847_4.59679756496379 chr8 119429401 119430649 + 4.59679756496379 NA Intergenic Intergenic -7137 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_155_208_-0.715095314544802_7.34981147480848_4.59631441941536 chr15 11903659 11905918 + 4.59631441941536 NA intron (NM_001286395, intron 2 of 8) CpG 886 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_3_25_-2.95628971477681_3.22229486075269_4.58930897763325 chr17 25536642 25537068 + 4.58930897763325 NA Intergenic Intergenic 18266 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA unique_peak1_29_3_2.63053254519913_3.31526627259956_4.58930897763324-4 chr4 47014591 47014962 + 4.58930897763324 NA TTS (NM_001356426) TTS (NM_001356426) -23062 NM_001081141 242425 Mm.101909 NM_001081141 ENSMUSG00000039809 Gabbr2 GABABR2|Gb2|Gm425|Gpr51 gamma-aminobutyric acid (GABA) B receptor, 2 protein-coding unique_peak1_29_3_2.63053254519913_3.31526627259956_4.58930897763324 chr13 102673193 102673671 + 4.58930897763324 NA Intergenic Intergenic -20115 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding unique_peak1_29_3_2.63053254519913_3.31526627259956_4.58930897763324-3 chr2 24434262 24434577 + 4.58930897763324 NA intron (NM_011040, intron 9 of 11) intron (NM_011040, intron 9 of 11) 41180 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_29_3_2.63053254519913_3.31526627259956_4.58930897763324-2 chr17 27050946 27051515 + 4.58930897763324 NA Intergenic Intergenic -6074 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding unique_peak2_16_48_-1.79782400720551_4.71579784051245_4.58197687146261 chr8 104623863 104624370 + 4.58197687146261 NA intron (NM_007663, intron 1 of 17) intron (NM_007663, intron 1 of 17) 280 NM_007663 12556 Mm.19423 NM_007663 ENSMUSG00000031881 Cdh16 - cadherin 16 protein-coding common_peak1_58_14_1.69251048971416_4.7531458404656_4.5819768714626 chr16 44557658 44558125 + 4.5819768714626 NA TTS (NR_037242) TTS (NR_037242) 238 NR_037242 100526478 NR_037242 ENSMUSG00000093046 Mir3081 mir-3081|mmu-mir-3081 microRNA 3081 ncRNA unique_peak1_141_58_0.974922712771646_6.37010440574766_4.58063041699724 chr2 65237612 65239724 + 4.58063041699724 NA promoter-TSS (NM_027225) promoter-TSS (NM_027225) -42 NM_027225 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak1_163_71_0.893979586584882_6.61691479473475_4.57402333028901 chr15 103002522 103003787 + 4.57402333028901 NA Intergenic Intergenic -6408 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding unique_peak1_66_18_1.5336255041968_5.01474026554199_4.56850390438427 chr14 66261538 66262028 + 4.56850390438427 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 19269 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_437_483_-0.447722158627702_8.69500215796074_4.56320823744725 chr15 80255214 80257762 + 4.56320823744725 NA exon (NM_001287180, exon 3 of 4) exon (NM_001287180, exon 3 of 4) 1304 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding unique_peak1_78_24_1.37371147650055_5.330711928025_4.56142700122523 chr8 3426017 3427497 + 4.56142700122523 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 33749 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_152_205_-0.722053444965101_7.32547380470067_4.55462154751172 chr15 60822566 60824734 + 4.55462154751172 NA exon (NM_001162926, exon 2 of 2) exon (NM_001162926, exon 2 of 2) 685 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA common_peak1_93_142_-0.893265013049579_6.7132388302536_4.55406863676503 chr13 32517879 32518964 + 4.55406863676503 NA Intergenic Intergenic -179877 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak2_15_46_-1.82454880745984_4.64231444794772_4.54965489029366 chr1 176818601 176818956 + 4.54965489029366 NA intron (NM_001357390, intron 1 of 18) intron (NM_001357390, intron 1 of 18) 4118 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding unique_peak1_55_13_1.71728919216108_4.66599951813814_4.54965489029365 chr1 135669361 135669998 + 4.54965489029365 NA Intergenic Intergenic -50384 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_97_146_-0.873369181043554_6.76298775431459_4.54801767229434 chr7 74553733 74555510 + 4.54801767229434 NA 5' UTR (NM_023908, exon 1 of 10) 5' UTR (NM_023908, exon 1 of 10) 159 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_159_69_0.899248987306976_6.57890751059845_4.54415698743972 chr3 83840629 83841961 + 4.54415698743972 NA intron (NM_011905, intron 1 of 2) intron (NM_011905, intron 1 of 2) 313 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak1_38_6_2.19901885462496_3.90686434937009_4.54209996799533-2 chr7 144029869 144030390 + 4.54209996799533 NA Intergenic Intergenic 20875 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_38_6_2.19901885462496_3.90686434937009_4.54209996799533 chr4 47279420 47280032 + 4.54209996799533 NA intron (NM_009928, intron 15 of 39) intron (NM_009928, intron 15 of 39) 71714 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding common_peak1_38_6_2.19901885462496_3.90686434937009_4.54209996799533 chr8 88138403 88138612 + 4.54209996799533 NA TTS (NR_106039) TTS (NR_106039) 301 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA common_peak1_92_31_1.25128514178024_5.62564257089012_4.54122084159515 chr7 30194342 30194996 + 4.54122084159515 NA intron (NM_009795, intron 1 of 10) intron (NM_009795, intron 1 of 10) 484 NM_009795 12336 Mm.439782 NM_009795 ENSMUSG00000001794 Capns1 Capa-4|Capa4|Capn4|Cdps|Css1|D7Ertd146e calpain, small subunit 1 protein-coding common_peak1_235_115_0.727310131048619_7.22163606065188_4.5398449447569 chr3 122245754 122247588 + 4.5398449447569 NA intron (NM_008129, intron 1 of 6) intron (NM_008129, intron 1 of 6) 1114 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak1_26_2_2.89463932975225_3.03228216559728_4.53603905993749 chr15 55556964 55557158 + 4.53603905993749 NA promoter-TSS (NM_134092) promoter-TSS (NM_134092) 251 NM_026759 68537 Mm.236795 NM_026759 ENSMUSG00000022370 Mrpl13 1110002D09Rik mitochondrial ribosomal protein L13 protein-coding unique_peak1_26_2_2.89463932975225_3.03228216559728_4.53603905993749-2 chr17 87844082 87844364 + 4.53603905993749 NA Intergenic Intergenic -46229 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_26_2_2.89463932975225_3.03228216559728_4.53603905993749-3 chr2 85065447 85065903 + 4.53603905993749 NA intron (NM_001081260, intron 6 of 11) intron (NM_001081260, intron 6 of 11) 15215 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak1_53_12_1.77210713275907_4.58649328452063_4.52227295846344 chr14 49172721 49173199 + 4.52227295846344 NA exon (NM_027492, exon 2 of 5) exon (NM_027492, exon 2 of 5) 714 NM_027492 70646 Mm.275688 NM_027492 ENSMUSG00000036282 Naa30 4930487N19Rik|5730533P17Rik|AI447922|AW322455|Nat12 N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding unique_peak2_13_44_-1.95309902296451_4.51530358484742_4.52227295846344 chr1 151091097 151091728 + 4.52227295846344 NA Intergenic Intergenic -46622 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-2 chr10 80963937 80964176 + 4.51544993495972 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 33965 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-7 chr16 92606698 92606977 + 4.51544993495972 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 90492 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-6 chr16 31500466 31500727 + 4.51544993495972 NA Intergenic Intergenic -70820 NR_152205 100047123 Mm.466711 NR_152205 Gm15743 - predicted gene 15743 ncRNA unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-10 chr2 35706947 35707297 + 4.51544993495972 NA intron (NM_001290639, intron 1 of 13) intron (NM_001290639, intron 1 of 13) 10390 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-14 chr6 52953278 52953602 + 4.51544993495972 NA intron (NM_173406, intron 1 of 4) intron (NM_173406, intron 1 of 4) -43820 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972 chr1 135237495 135237730 + 4.51544993495972 NA Intergenic Intergenic 20860 NM_001163131 13710 Mm.441439 NM_007921 ENSMUSG00000003051 Elf3 ESE-1|ESX|jen E74-like factor 3 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-11 chr3 22700343 22700659 + 4.51544993495972 NA Intergenic Intergenic 449131 NR_004439 19784 NR_004439 Rprl2 RPRH3|Rmrp3 ribonuclease P RNA-like 2 ncRNA unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-12 chr4 31939254 31939573 + 4.51544993495972 NA Intergenic Intergenic -24694 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-8 chr17 35874590 35874823 + 4.51544993495972 NA intron (NM_001146710, intron 3 of 3) intron (NM_001146710, intron 3 of 3) -5072 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-15 chr7 135566524 135566821 + 4.51544993495972 NA TTS (NR_035488) TTS (NR_035488) 510 NR_035488 100316818 NR_035488 ENSMUSG00000088141 Mir1962 mir-1962|mmu-mir-1962 microRNA 1962 ncRNA unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-3 chr11 102883751 102883994 + 4.51544993495972 NA exon (NM_028492, exon 5 of 5) exon (NM_028492, exon 5 of 5) -1297 NM_025766 66784 Mm.483216 NM_025766 ENSMUSG00000075510 Fam187a 4933439F11Rik family with sequence similarity 187, member A protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-9 chr18 60712854 60713148 + 4.51544993495972 NA exon (NM_001348101, exon 2 of 15) exon (NM_001348101, exon 2 of 15) 14565 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-4 chr14 8259041 8259272 + 4.51544993495972 NA promoter-TSS (NM_001161667) promoter-TSS (NM_001161667) -137 NM_053115 93732 Mm.28700 NM_053115 ENSMUSG00000021751 Acox2 THCCox acyl-Coenzyme A oxidase 2, branched chain protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-13 chr5 4756648 4756953 + 4.51544993495972 NA exon (NM_021457, exon 1 of 1) exon (NM_021457, exon 1 of 1) 1416 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding unique_peak1_16_0_3.8168858369097_1.90844291845485_4.51544993495972-5 chr15 13425525 13425735 + 4.51544993495972 NA Intergenic Intergenic -251955 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_204_96_0.783648644593945_6.9917371644841_4.51524605592964 chr3 102469970 102472321 + 4.51524605592964 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 1226 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_103_37_1.16350070186504_5.82967786437611_4.51486260054411 chr14 55094712 55095640 + 4.51486260054411 NA 5' UTR (NM_153083, exon 1 of 2) 5' UTR (NM_153083, exon 1 of 2) 392 NM_153083 105663 Mm.319204 NM_153083 ENSMUSG00000045691 Thtpa AW122966 thiamine triphosphatase protein-coding common_peak1_107_39_1.14356377643955_5.89370998310714_4.51476170683141 chr11 32266875 32267683 + 4.51476170683141 NA intron (NR_104306, intron 1 of 13) PB1D7|SINE|Alu 428 NM_181569 17168 Mm.263161 NM_181569 ENSMUSG00000020289 Nprl3 Aag|CGTHBA|HS-26|HS-40|Mare|Phg|Prox1|m(alpha)RE nitrogen permease regulator-like 3 protein-coding common_peak2_68_114_-1.02180114692067_6.33458947748404_4.50684420283634 chr10 19046456 19047912 + 4.50684420283634 NA Intergenic Intergenic -31774 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak2_8_34_-2.22346180912577_4.01755211238208_4.50509115191453 chr5 110339173 110339694 + 4.50509115191453 NA TTS (NM_153400) TTS (NM_153400) 3602 NM_153400 231602 Mm.55948 NM_153400 ENSMUSG00000029503 P2rx2 P2X2a|P2x2 purinergic receptor P2X, ligand-gated ion channel, 2 protein-coding unique_peak1_40_7_2.07801454717368_4.03900727358684_4.50509115191452-2 chr3 106685014 106685355 + 4.50509115191452 NA intron (NM_001039478, intron 1 of 2) intron (NM_001039478, intron 1 of 2) 197 NM_001039478 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding unique_peak1_40_7_2.07801454717368_4.03900727358684_4.50509115191452-3 chr4 86685220 86685920 + 4.50509115191452 NA Intergenic Intergenic -15511 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding unique_peak1_40_7_2.07801454717368_4.03900727358684_4.50509115191452 chr17 24736666 24737031 + 4.50509115191452 NA TTS (NM_001163945) TTS (NM_001163945) 255 NM_001346668 27361 Mm.28212 NM_013759 ENSMUSG00000075705 Msrb1 D17Wsu82e|SELX|SelR|Sepr|Sepx1 methionine sulfoxide reductase B1 protein-coding unique_peak1_76_23_1.39587195145003_5.28289847644617_4.50093765979984 chr17 30191381 30192025 + 4.50093765979984 NA intron (NM_001356265, intron 4 of 5) intron (NM_001356265, intron 4 of 5) 186664 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_12_42_-1.99367160067374_4.42942895436523_4.50078841046546 chr5 53543190 53543423 + 4.50078841046546 NA Intergenic Intergenic -12473 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak1_50_11_1.80570395884275_4.48781448014253_4.50078841046546 chr6 37399714 37400648 + 4.50078841046546 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 41967 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak2_23_58_-1.57176740291659_5.09675934790355_4.49741418752704 chr10 7390815 7391833 + 4.49741418752704 NA Intergenic CpG 82153 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak1_260_131_0.685135126900479_7.38696168280869_4.49417758153964 chr3 38482760 38484851 + 4.49417758153964 NA 5' UTR (NM_001167883, exon 2 of 4) 5' UTR (NM_001167883, exon 2 of 4) 1011 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding unique_peak1_47_10_1.84438904823471_4.38162614275465_4.48642921518059 chr3 96099048 96099743 + 4.48642921518059 NA Intergenic Intergenic -5132 NM_001025613 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak1_48_10_1.87392652472876_4.39639488100168_4.48642921518059 chr18 52636845 52637394 + 4.48642921518059 NA intron (NM_001360984, intron 3 of 3) intron (NM_001360984, intron 3 of 3) -9101 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding unique_peak1_43_8_2.00925040115475_4.17455020201969_4.4860419630448 chr3 88510208 88510683 + 4.4860419630448 NA Intergenic MER81|DNA|hAT-Blackjack -7093 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_72_118_-0.990402327742017_6.39961659943694_4.48076069801096 chr13 23749071 23750662 + 4.48076069801096 NA Intergenic Intergenic -1222 NM_175660 319172 Mm.423402 NM_175660 ENSMUSG00000061615 Hist1h2ab H2A.1|H2a-53 histone cluster 1, H2ab protein-coding common_peak2_18_51_-1.7242212840227_4.83832907612974_4.47502662768491 chr16 92696938 92697334 + 4.47502662768491 NA 5' UTR (NM_009821, exon 1 of 5) 5' UTR (NM_009821, exon 1 of 5) 193 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_61_16_1.58298669830244_4.87895619040156_4.47502662768491-3 chr19 3353783 3354239 + 4.47502662768491 NA intron (NM_013495, intron 3 of 18) intron (NM_013495, intron 3 of 18) 30710 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_61_16_1.58298669830244_4.87895619040156_4.47502662768491 chr11 88420461 88421098 + 4.47502662768491 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 68006 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_61_16_1.58298669830244_4.87895619040156_4.47502662768491 chr10 71061594 71062738 + 4.47502662768491 NA intron (NM_031397, intron 2 of 20) intron (NM_031397, intron 2 of 20) 97524 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_61_16_1.58298669830244_4.87895619040156_4.47502662768491-2 chr11 40755573 40756256 + 4.47502662768491 NA promoter-TSS (NM_009831) promoter-TSS (NM_009831) -628 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-8 chr17 16339482 16339814 + 4.46429741251234 NA Intergenic Intergenic -513062 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-6 chr2 158221168 158221508 + 4.46429741251234 NA intron (NM_001131021, intron 1 of 15) intron (NM_001131021, intron 1 of 15) 7886 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-4 chr11 70218420 70218743 + 4.46429741251234 NA intron (NM_172371, intron 3 of 3) intron (NM_172371, intron 3 of 3) 2413 NM_172371 69309 Mm.93266 NM_172371 ENSMUSG00000044367 Slc16a13 1700007D07Rik solute carrier family 16 (monocarboxylic acid transporters), member 13 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-2 chr10 8769025 8769345 + 4.46429741251234 NA intron (NM_175155, intron 8 of 19) intron (NM_175155, intron 8 of 19) 116885 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-9 chr7 130936207 130936507 + 4.46429741251234 NA exon (NM_019564, exon 1 of 9) exon (NM_019564, exon 1 of 9) 154 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-8 chr4 127023469 127023794 + 4.46429741251234 NA intron (NM_023603, intron 3 of 9) intron (NM_023603, intron 3 of 9) 2330 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-9 chr2 155807957 155808244 + 4.46429741251234 NA intron (NM_010808, intron 5 of 8) intron (NM_010808, intron 5 of 8) 11103 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-7 chr14 54553435 54553773 + 4.46429741251234 NA intron (NM_145462, intron 1 of 9) intron (NM_145462, intron 1 of 9) 757 NM_145462 219072 Mm.202152 NM_145462 ENSMUSG00000022177 Haus4 9430093H08Rik|AU016300|D14Ertd500e HAUS augmin-like complex, subunit 4 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-5 chr19 28048091 28048507 + 4.46429741251234 NA Intergenic Intergenic -37133 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-3 chr15 41846224 41846412 + 4.46429741251234 NA intron (NR_152565, intron 12 of 17) intron (NR_152565, intron 12 of 17) 15360 NM_001130164 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-2 chr12 85361732 85362073 + 4.46429741251234 NA intron (NM_026775, intron 1 of 4) intron (NM_026775, intron 1 of 4) 12815 NM_026775 68581 Mm.379159 NM_026775 ENSMUSG00000021248 Tmed10 1110014C03Rik|Tmp21|p23|p24delta1 transmembrane p24 trafficking protein 10 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234 chr1 126973117 126973476 + 4.46429741251234 NA Intergenic Intergenic -142664 NM_001081756 210356 Mm.377234 NM_172484 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5 NCK-associated protein 5 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234 chr1 192859474 192859731 + 4.46429741251234 NA Intergenic Intergenic -3850 NM_198247 214791 Mm.22806 NM_198247 ENSMUSG00000016262 Sertad4 4833404A09|C130018M11Rik SERTA domain containing 4 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-4 chr18 63456438 63456729 + 4.46429741251234 NA Intergenic Intergenic -69400 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-5 chr12 84849825 84850076 + 4.46429741251234 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -25852 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-3 chr10 68446597 68446813 + 4.46429741251234 NA intron (NM_028491, intron 5 of 7) intron (NM_028491, intron 5 of 7) 95170 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 Cabcoco1 1700040L02Rik ciliary associated calcium binding coiled-coil 1 protein-coding unique_peak1_20_1_3.11958967559262_2.55979483779631_4.46429741251234-7 chr3 102174322 102174562 + 4.46429741251234 NA intron (NM_177545, intron 4 of 7) intron (NM_177545, intron 4 of 7) 30251 NM_177545 229658 Mm.118004 NM_177545 ENSMUSG00000027860 Vangl1 Kitenin|Lpp2|Stb2|Stbm VANGL planar cell polarity 1 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-6 chr13 113843779 113843972 + 4.46429741251234 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 49367 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-11 chr6 86396857 86397078 + 4.46429741251234 NA intron (NM_025823, intron 1 of 5) CpG 183 NM_001355687 66881 Mm.30849 NM_025823 ENSMUSG00000029998 Pcyox1 1200015P13Rik|AI115532|AI448340|PCL1|Pcly prenylcysteine oxidase 1 protein-coding unique_peak2_0_17_-4.41166503893154_1.96409248197654_4.46429741251234 chr11 60940042 60940381 + 4.46429741251234 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 8154 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding unique_peak1_19_1_3.04969694297167_2.52484847148584_4.46429741251234-10 chr6 17070304 17070684 + 4.46429741251234 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 5345 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding unique_peak1_79_25_1.33514726568409_5.36801335098314_4.46039286243102 chr15 102801466 102802307 + 4.46039286243102 NA Intergenic MER5A1|DNA|hAT-Charlie -54977 NR_104334 102216269 NR_104334 Gm38436 Cistr|Cistr-act predicted gene, 38436 ncRNA unique_peak1_93_32_1.22221220437036_5.65550022154363_4.45839639202807 chr3 88177597 88178522 + 4.45839639202807 NA promoter-TSS (NR_045997) promoter-TSS (NR_045997) -274 NR_045997 76642 Mm.424420 NR_045997 ENSMUSG00000096935 1700113A16Rik 2210408E11Rik|AA408983 RIKEN cDNA 1700113A16 gene ncRNA unique_peak1_32_4_2.4451378895104_3.54449703964256_4.45580894998946-3 chr7 89840687 89841022 + 4.45580894998946 NA intron (NM_181407, intron 7 of 13) intron (NM_181407, intron 7 of 13) 62775 NM_001162979 70884 Mm.252823 NM_001162979 ENSMUSG00000039391 Ccdc81 4921513D09Rik coiled-coil domain containing 81 protein-coding unique_peak2_4_27_-2.74354801993944_3.43558091208788_4.45580894998946 chr17 31747745 31748377 + 4.45580894998946 NA Intergenic Intergenic 70130 NM_001278570 12954 Mm.1228 NM_013501 ENSMUSG00000024041 Cryaa Acry-1|Crya-1|Crya1|DAcry-1|lop18 crystallin, alpha A protein-coding unique_peak1_32_4_2.4451378895104_3.54449703964256_4.45580894998946 chr11 70919633 70920059 + 4.45580894998946 NA intron (NM_019400, intron 10 of 17) intron (NM_019400, intron 10 of 17) 50127 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding unique_peak1_32_4_2.4451378895104_3.54449703964256_4.45580894998946-2 chr11 82846052 82846394 + 4.45580894998946 NA intron (NM_001164569, intron 1 of 7) intron (NM_001164569, intron 1 of 7) -17180 NM_026097 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak2_50_92_-1.14849235154412_5.96491263533597_4.45195674625618 chr1 43164039 43164709 + 4.45195674625618 NA promoter-TSS (NM_010212) promoter-TSS (NM_010212) -413 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_48_89_-1.15849495296362_5.91260561984786_4.44593705223015 chr5 99978216 99978924 + 4.44593705223015 NA exon (NM_001077267, exon 1 of 7) exon (NM_001077267, exon 1 of 7) 368 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak1_128_51_1.01958343472255_6.21023143550237_4.44522735928725 chr8 70466384 70467728 + 4.44522735928725 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 9887 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_100_36_1.16004453362846_5.78947563244318_4.44388276880307 chr14 60250881 60251400 + 4.44388276880307 NA intron (NM_001362440, intron 1 of 14) CpG 339 NM_001362440 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding unique_peak1_67_19_1.48084778287584_5.06235198632529_4.44353284653605 chr10 128210994 128211740 + 4.44353284653605 NA exon (NM_025716, exon 2 of 2) exon (NM_025716, exon 2 of 2) 427 NM_025716 66701 Mm.29694 NM_025716 ENSMUSG00000051346 Spryd4 4633402N23Rik|AA114801 SPRY domain containing 4 protein-coding common_peak1_79_126_-0.953097702946979_6.51213583529868_4.44154168264308 chr1 156221743 156222446 + 4.44154168264308 NA Intergenic Intergenic -17068 NM_177838 329274 Mm.150857 NM_177838 ENSMUSG00000015484 Fam163a A230106N23Rik family with sequence similarity 163, member A protein-coding unique_peak1_83_27_1.29812479438853_5.45641731925187_4.42928010077091 chr17 87173964 87175420 + 4.42928010077091 NA Intergenic Intergenic 20250 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak1_83_27_1.29812479438853_5.45641731925187_4.42928010077091-2 chr19 42074805 42075948 + 4.42928010077091 NA 3' UTR (NM_198108, exon 5 of 5) 3' UTR (NM_198108, exon 5 of 5) 10994 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding common_peak1_208_99_0.767387643576443_7.02755001156295_4.41893640809126 chr14 51984313 51985863 + 4.41893640809126 NA intron (NM_001145921, intron 1 of 23) CpG 255 NM_198249 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding unique_peak1_77_24_1.3554626073346_5.32158749344202_4.39778260092679 chr15 79400941 79401716 + 4.39778260092679 NA intron (NM_172608, intron 1 of 8) intron (NM_172608, intron 1 of 8) 1591 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding unique_peak1_56_14_1.64310846116408_4.72844482619056_4.39313161798409-2 chr7 89657075 89658043 + 4.39313161798409 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 24741 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_56_14_1.64310846116408_4.72844482619056_4.39313161798409 chr3 84438572 84439386 + 4.39313161798409 NA Intergenic Intergenic 40512 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak2_21_54_-1.59512933135436_4.98379504784748_4.39141806271911 chr8 27058425 27058947 + 4.39141806271911 NA Intergenic Intergenic 16131 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak2_62_106_-1.04809668815431_6.21741864232399_4.39054515884945 chr11 87748578 87749475 + 4.39054515884945 NA Intergenic Intergenic -7838 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA unique_peak1_71_21_1.42522465046216_5.17204394386838_4.38310456572582 chr19 56588652 56589136 + 4.38310456572582 NA intron (NM_025811, intron 6 of 10) intron (NM_025811, intron 6 of 10) 40633 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak1_68_113_-1.00920111014103_6.32828945909423_4.38254351119263 chr1 39367958 39368863 + 4.38254351119263 NA intron (NM_001252219, intron 2 of 4) CpG 559 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak2_105_39_1.11678698080925_5.88032158529199_4.37381541636593 chr3 37359787 37360411 + 4.37381541636593 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 11446 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak1_105_39_1.11678698080925_5.88032158529199_4.37381541636593 chr14 47649246 47650137 + 4.37381541636593 NA intron (NM_001347528, intron 1 of 37) CpG 380 NM_001347524 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding common_peak1_102_37_1.14965985161464_5.82275743925091_4.37155348239208 chr2 4445921 4446832 + 4.37155348239208 NA intron (NM_001177843, intron 2 of 23) intron (NM_001177843, intron 2 of 23) 45400 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_34_5_2.26639349182465_3.71815924663348_4.37015862955249 chr2 180947981 180948249 + 4.37015862955249 NA intron (NM_001141933, intron 1 of 5) intron (NM_001141933, intron 1 of 5) 6584 NM_001141933 58237 Mm.40361 NM_021426 ENSMUSG00000027574 Nkain4 AB030182|C030019F02Rik Na+/K+ transporting ATPase interacting 4 protein-coding unique_peak2_5_29_-2.58190499001678_3.61593810060013_4.37015862955249 chr7 89514146 89514381 + 4.37015862955249 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 3323 NM_029614 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak2_30_67_-1.40995832212431_5.38248368018818_4.36422420509488 chr19 46529627 46530125 + 4.36422420509488 NA Intergenic Intergenic 28228 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_144_194_-0.719815373191708_7.24742262715376_4.36176777765869 chr7 89979574 89981503 + 4.36176777765869 NA 5' UTR (NM_021876, exon 1 of 12) 5' UTR (NM_021876, exon 1 of 12) 438 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding common_peak1_54_13_1.69147737929333_4.65309361170427_4.35777281740387 chr15 76268965 76269532 + 4.35777281740387 NA intron (NR_045747, intron 1 of 2) intron (NR_045747, intron 1 of 2) 591 NR_045747 100038659 Mm.448549 NR_045747 ENSMUSG00000115946 Mirt2 Gm10872|Gm24562 myocardial infraction associated transcript 2 ncRNA common_peak2_62_17_1.52344529680452_4.93164764984457_4.34131796804826 chr16 44557666 44558327 + 4.34131796804826 NA TTS (NR_037242) TTS (NR_037242) 133 NR_037242 100526478 NR_037242 ENSMUSG00000093046 Mir3081 mir-3081|mmu-mir-3081 microRNA 3081 ncRNA unique_peak1_28_3_2.58196800095051_3.29098400047526_4.33845181153635-5 chr7 143063910 143064378 + 4.33845181153635 NA intron (NM_133655, intron 2 of 7) intron (NM_133655, intron 2 of 7) -5224 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding unique_peak1_28_3_2.58196800095051_3.29098400047526_4.33845181153635-2 chr14 69810757 69811139 + 4.33845181153635 NA Intergenic Intergenic -5403 NM_153514 246710 Mm.102367 NM_153514 ENSMUSG00000022075 Rhobtb2 Dbc2|E130206H14Rik|mKIAA0717 Rho-related BTB domain containing 2 protein-coding unique_peak1_28_3_2.58196800095051_3.29098400047526_4.33845181153635 chr1 158212114 158212685 + 4.33845181153635 NA Intergenic Intergenic 143861 NM_207583 240843 Mm.329579 NM_207583 ENSMUSG00000004031 Brinp2 6430517E21Rik|BB361039|Fam5b|mKIAA1747 bone morphogenic protein/retinoic acid inducible neural-specific 2 protein-coding unique_peak1_28_3_2.58196800095051_3.29098400047526_4.33845181153635-6 chr8 36605280 36605693 + 4.33845181153635 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 8457 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_28_3_2.58196800095051_3.29098400047526_4.33845181153635-3 chr17 78319847 78320287 + 4.33845181153635 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 98085 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_28_3_2.58196800095051_3.29098400047526_4.33845181153635-4 chr7 141363678 141364048 + 4.33845181153635 NA TTS (NM_133191) TTS (NM_133191) 1247 NR_033532 320871 Mm.475463 NM_177280 ENSMUSG00000086844 B230206H07Rik - RIKEN cDNA B230206H07 gene ncRNA unique_peak2_2_24_-3.31181560460974_2.98794838746985_4.33845181153634-2 chr2 117048012 117048385 + 4.33845181153634 NA Intergenic Intergenic -72873 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak2_2_24_-3.31181560460974_2.98794838746985_4.33845181153634 chr13 31467605 31468189 + 4.33845181153634 NA Intergenic Intergenic -90273 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding unique_peak2_3_24_-2.89970618641044_3.1940030965695_4.33845181153634 chr4 106827629 106827959 + 4.33845181153634 NA Intergenic Intergenic -22787 NM_001347159 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_27_62_-1.44558082970799_5.25448950864592_4.33599591868387 chr10 80826710 80827046 + 4.33599591868387 NA non-coding (NR_027656, exon 1 of 5) non-coding (NR_027656, exon 1 of 5) 182 NR_027656 100041965 Mm.328806 NR_027656 Oaz1-ps Gm1823|Gm9786|Oaz-ps ornithine decarboxylase antizyme 1, pseudogene pseudo common_peak2_70_114_-0.980869309237644_6.35505539632555_4.3332730607786 chr7 130264806 130266071 + 4.3332730607786 NA intron (NM_201601, intron 1 of 15) CpG 1370 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak1_51_12_1.71804347674078_4.55946145651148_4.32705037749324 chr2 38514053 38514767 + 4.32705037749324 NA intron (NM_001159631, intron 1 of 9) B1F1|SINE|Alu 2534 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_51_12_1.71804347674078_4.55946145651148_4.32705037749324-2 chr3 101136028 101136487 + 4.32705037749324 NA Intergenic Intergenic -26091 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak2_13_43_-1.92067754527213_4.49909284600123_4.32705037749324 chr10 124249250 124250105 + 4.32705037749324 NA Intergenic Intergenic -219397 NR_028310 75030 Mm.159403 NR_028310 ENSMUSG00000112364 4930503E24Rik - eukaryotic translation initiation factor 3, subunit I pseudogene pseudo unique_peak2_13_43_-1.92067754527213_4.49909284600123_4.32705037749324-2 chr15 11773493 11774137 + 4.32705037749324 NA Intergenic Intergenic 131859 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_100_148_-0.849670621204748_6.79433320985979_4.32680718462615 chr11 69900361 69901770 + 4.32680718462615 NA promoter-TSS (NM_001316696) promoter-TSS (NM_001316696) -79 NM_027419 70419 Mm.272859 NM_027419 ENSMUSG00000018570 2810408A11Rik 1700019L01Rik|4930470J18Rik RIKEN cDNA 2810408A11 gene protein-coding unique_peak1_69_20_1.4519835901938_5.11830921787566_4.32602051012106 chr11 83855318 83856276 + 4.32602051012106 NA intron (NM_001291269, intron 1 of 8) intron (NM_001291269, intron 1 of 8) 2837 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_69_20_1.4519835901938_5.11830921787566_4.32602051012106 chr11 117270158 117271231 + 4.32602051012106 NA intron (NM_001113487, intron 1 of 10) intron (NM_001113487, intron 1 of 10) 4448 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_68_20_1.43137148124495_5.10800316340123_4.32602051012106 chr7 75787599 75788523 + 4.32602051012106 NA Intergenic Intergenic -60277 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_53_94_-1.09730875743079_6.02120122961555_4.32579147768669 chr3 79978856 79979851 + 4.32579147768669 NA Intergenic Intergenic 93423 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_222_109_0.722764959459557_7.14274219325444_4.32037982779495 chr15 102972332 102973934 + 4.32037982779495 NA promoter-TSS (NR_029722) promoter-TSS (NR_029722) -217 NR_029722 723958 NR_029722 ENSMUSG00000065488 Mir196a-2 Mirn196a-2|mir-196a-2 microRNA 196a-2 ncRNA unique_peak1_36_6_2.12360581899984_3.86915783155752_4.31679605591679 chr12 110084752 110085578 + 4.31679605591679 NA Intergenic Intergenic 72908 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA unique_peak1_36_6_2.12360581899984_3.86915783155752_4.31679605591679-2 chr9 54707861 54708505 + 4.31679605591679 NA promoter-TSS (NR_049206) promoter-TSS (NR_049206) -130 NR_049206 100885845 NR_049206 ENSMUSG00000093441 Mir5710 Gm22872|mir-5710|mmu-mir-5710 microRNA 5710 ncRNA unique_peak1_37_6_2.16180853248754_3.88825918830138_4.31679605591679 chr3 151446404 151446798 + 4.31679605591679 NA intron (NM_133222, intron 2 of 15) B4|SINE|B4 8719 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak1_36_6_2.12360581899984_3.86915783155752_4.31679605591679 chr4 57846693 57847248 + 4.31679605591679 NA intron (NM_001035532, intron 1 of 3) intron (NM_001035532, intron 1 of 3) 1722 NM_001035532 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak2_83_129_-0.916888096582318_6.56392376473729_4.31192135482289 chr19 24732523 24733808 + 4.31192135482289 NA intron (NM_175013, intron 8 of 10) intron (NM_175013, intron 8 of 10) 59157 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak2_40_79_-1.24391354771368_5.69997132103052_4.30237878344897 chr18 38601501 38602198 + 4.30237878344897 NA promoter-TSS (NM_011898) promoter-TSS (NM_011898) -581 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak1_96_34_1.18232753746611_5.72044678567802_4.30237878344897 chr13 15802976 15803984 + 4.30237878344897 NA promoter-TSS (NR_045507) promoter-TSS (NR_045507) -850 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_49_11_1.77733636143115_4.47363068143673_4.30187356343108-3 chr14 52015007 52015726 + 4.30187356343108 NA promoter-TSS (NM_001253695) promoter-TSS (NM_001253695) -808 NM_001253695 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding unique_peak1_49_11_1.77733636143115_4.47363068143673_4.30187356343108-2 chr11 69415566 69415991 + 4.30187356343108 NA Intergenic Intergenic -2103 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak1_49_11_1.77733636143115_4.47363068143673_4.30187356343108 chr11 16799981 16800680 + 4.30187356343108 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 48127 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak2_8_33_-2.18164163343115_3.99664202453477_4.28647646517483 chr13 56600711 56601143 + 4.28647646517483 NA Intergenic Intergenic -8659 NM_009369 21810 Mm.14455 NM_009369 ENSMUSG00000035493 Tgfbi 68kDa|AI181842|AI747162|Beta-ig|big-h3 transforming growth factor, beta induced protein-coding unique_peak1_39_7_2.04264196339843_4.02132098169922_4.28647646517482 chr2 152316625 152316999 + 4.28647646517482 NA 3' UTR (NM_001083921, exon 12 of 12) 3' UTR (NM_001083921, exon 12 of 12) 15613 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding unique_peak1_39_7_2.04264196339843_4.02132098169922_4.28647646517482-2 chr8 94012771 94013032 + 4.28647646517482 NA promoter-TSS (NM_011787) promoter-TSS (NM_011787) -261 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak2_65_108_-1.00817331995241_6.26409766480072_4.28548556035367 chr15 75269501 75270303 + 4.28548556035367 NA intron (NM_008530, intron 3 of 3) intron (NM_008530, intron 3 of 3) 1481 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak1_46_10_1.81422968466476_4.36654646096968_4.28341153583535-2 chr6 52224036 52224559 + 4.28341153583535 NA exon (NM_010456, exon 2 of 2) exon (NM_010456, exon 2 of 2) 3073 NM_010456 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding unique_peak1_46_10_1.81422968466476_4.36654646096968_4.28341153583535 chr11 88472894 88473703 + 4.28341153583535 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 120525 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-3 chr16 92542886 92543371 + 4.27364484827118 NA Intergenic Intergenic 44981 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-6 chr7 99319106 99319628 + 4.27364484827118 NA 3' UTR (NM_001048167, exon 3 of 3) 3' UTR (NM_001048167, exon 3 of 3) 33872 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding unique_peak1_25_2_2.84057567373396_3.00525033758813_4.27364484827118-2 chr19 4926153 4926450 + 4.27364484827118 NA intron (NM_001360711, intron 2 of 17) intron (NM_001360711, intron 2 of 17) 1669 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding unique_peak1_25_2_2.84057567373396_3.00525033758813_4.27364484827118 chr11 95507657 95508336 + 4.27364484827118 NA Intergenic Intergenic 6569 NM_130858 104079 Mm.22970 NM_130858 ENSMUSG00000046719 Nxph3 - neurexophilin 3 protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118 chr1 180022001 180022237 + 4.27364484827118 NA intron (NR_153194, intron 2 of 35) intron (NR_153194, intron 2 of 35) 61030 NM_001033285 226751 Mm.259655 NM_001033285 ENSMUSG00000026490 Cdc42bpa A930014J19Rik|DMPK-like CDC42 binding protein kinase alpha protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-8 chr9 61664296 61664780 + 4.27364484827118 NA Intergenic Intergenic 249972 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-4 chr3 21906080 21906305 + 4.27364484827118 NA Intergenic Intergenic -170460 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-7 chr7 102686842 102687134 + 4.27364484827118 NA intron (NM_198012, intron 1 of 6) intron (NM_198012, intron 1 of 6) 339 NM_198012 101700 Mm.39043 NM_198012 ENSMUSG00000073968 Trim68 AI894158|F730114J12Rik|Rnf137|SS-56 tripartite motif-containing 68 protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-5 chr6 114887445 114887721 + 4.27364484827118 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 34238 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_25_2_2.84057567373396_3.00525033758813_4.27364484827118-3 chr8 121575662 121576038 + 4.27364484827118 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 2956 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak1_24_2_2.7843913410044_2.97715817122335_4.27364484827118-2 chr11 31637689 31638024 + 4.27364484827118 NA Intergenic Intergenic 34006 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_42_8_1.97631752876712_4.15808376582587_4.27327766748815-2 chr5 139013466 139013992 + 4.27327766748815 NA Intergenic Intergenic -18776 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding unique_peak1_42_8_1.97631752876712_4.15808376582587_4.27327766748815 chr14 48131058 48131676 + 4.27327766748815 NA intron (NM_033602, intron 1 of 5) intron (NM_033602, intron 1 of 5) 10498 NM_033602 93834 Mm.296457 NM_033602 ENSMUSG00000021846 Peli2 AW047589|BB129927 pellino 2 protein-coding unique_peak2_9_35_-2.11317307889739_4.11333846199362_4.27327766748814 chr19 53461071 53461424 + 4.27327766748814 NA intron (NR_028427, intron 2 of 9) intron (NR_028427, intron 2 of 9) 3549 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA unique_peak1_44_9_1.88944005253922_4.26664812115697_4.27319591428744-2 chr15 86083474 86084320 + 4.27319591428744 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 25170 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak1_44_9_1.88944005253922_4.26664812115697_4.27319591428744 chr1 89471096 89471729 + 4.27319591428744 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 16601 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_44_9_1.88944005253922_4.26664812115697_4.27319591428744-3 chr4 139235831 139236435 + 4.27319591428744 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 42022 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_82_27_1.28096869883331_5.44783927147426_4.27256477761841 chr7 116307282 116308246 + 4.27256477761841 NA intron (NM_001305185, intron 3 of 26) CpG 612 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_66_19_1.45962492275302_5.05174055626387_4.27036875499349 chr3 142559462 142560336 + 4.27036875499349 NA promoter-TSS (NM_018734) promoter-TSS (NM_018734) -145 NM_001289492 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding unique_peak1_66_19_1.45962492275302_5.05174055626387_4.27036875499349-2 chr6 91726774 91727690 + 4.27036875499349 NA intron (NM_009320, intron 5 of 14) intron (NM_009320, intron 5 of 14) 43165 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_22_55_-1.5574466406881_5.02863160171355_4.27036875499348 chr15 32920743 32921377 + 4.27036875499348 NA 5' UTR (NM_008304, exon 1 of 5) 5' UTR (NM_008304, exon 1 of 5) 337 NM_008304 15529 Mm.234266 NM_008304 ENSMUSG00000022261 Sdc2 4833414L08Rik|AA960457|Hspg1|Synd2|syndecan-2 syndecan 2 protein-coding common_peak2_122_171_-0.774469584874205_7.039029962265_4.25724054806999 chr5 100620259 100622151 + 4.25724054806999 NA Intergenic Intergenic -49000 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak2_51_92_-1.12067561622616_5.97882100299495_4.25264436918894 chr2 117598004 117599428 + 4.25264436918894 NA Intergenic Intergenic 214086 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_448_258_0.489864906653661_8.26174074101339_4.24285580774084 chr19 44746510 44751363 + 4.24285580774084 NA Intergenic Intergenic -8458 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_127_176_-0.758730444584934_7.08824032779053_4.23908882154911 chr8 27085301 27087185 + 4.23908882154911 NA intron (NM_054044, intron 1 of 18) intron (NM_054044, intron 1 of 18) 402 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak2_93_33_1.17914348247847_5.67703458248957_4.23188000554854 chr15 11064850 11065428 + 4.23188000554854 NA exon (NM_175501, exon 1 of 24) exon (NM_175501, exon 1 of 24) 366 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding common_peak2_76_120_-0.938028785103405_6.44984884472289_4.22117392279451 chr2 30707047 30708038 + 4.22117392279451 NA Intergenic MIR|SINE|MIR -13668 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak2_21_53_-1.56865711999316_4.97055894216689_4.21634310945364-2 chr9 108952076 108952824 + 4.21634310945364 NA Intergenic Intergenic -1295 NM_007738 12836 Mm.6200 NM_007738 ENSMUSG00000025650 Col7a1 AW209154 collagen, type VII, alpha 1 protein-coding unique_peak2_21_53_-1.56865711999316_4.97055894216689_4.21634310945364 chr1 14309027 14310011 + 4.21634310945364 NA intron (NM_010164, intron 1 of 17) intron (NM_010164, intron 1 of 17) 680 NM_001310459 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding common_peak2_146_195_-0.707571078094944_7.26092430506774_4.21615292749988 chr17 69416656 69418131 + 4.21615292749988 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 946 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA unique_peak1_30_4_2.35557642423866_3.49971630700669_4.21583923654667-3 chr6 29416302 29416617 + 4.21583923654667 NA intron (NM_145574, intron 12 of 15) intron (NM_145574, intron 12 of 15) -16694 NM_001081185 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding unique_peak1_30_4_2.35557642423866_3.49971630700669_4.21583923654667-5 chr8 60643966 60644334 + 4.21583923654667 NA intron (NM_001293769, intron 1 of 1) intron (NM_001293769, intron 1 of 1) -10954 NM_001177881 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak1_30_4_2.35557642423866_3.49971630700669_4.21583923654667 chr1 58744936 58745305 + 4.21583923654667 NA intron (NM_001355056, intron 7 of 8) intron (NM_001355056, intron 7 of 8) 14568 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak1_30_4_2.35557642423866_3.49971630700669_4.21583923654667-4 chr7 49763801 49764437 + 4.21583923654667 NA intron (NM_001146053, intron 3 of 5) intron (NM_001146053, intron 3 of 5) 4607 NM_001146052 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding unique_peak1_30_4_2.35557642423866_3.49971630700669_4.21583923654667-2 chr13 36727450 36727865 + 4.21583923654667 NA intron (NM_153529, intron 2 of 2) intron (NM_153529, intron 2 of 2) 6820 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak1_30_4_2.35557642423866_3.49971630700669_4.21583923654667-6 chr9 51059346 51059560 + 4.21583923654667 NA intron (NM_001033534, intron 7 of 7) intron (NM_001033534, intron 7 of 7) 17641 NM_001033534 244864 Mm.335152 NM_001033534 ENSMUSG00000060594 Layn E030012M19Rik|Gm511 layilin protein-coding unique_peak2_4_26_-2.69108060004531_3.40934720214082_4.21583923654667 chr15 71829673 71829970 + 4.21583923654667 NA intron (NM_027174, intron 51 of 63) intron (NM_027174, intron 51 of 63) -101983 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak1_70_21_1.40518912306943_5.16202618017201_4.21528825723629 chr16 52031758 52032401 + 4.21528825723629 NA intron (NM_001033238, intron 1 of 17) CpG 530 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-15 chr3 126277904 126278127 + 4.21441993929574 NA Intergenic Intergenic -85837 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-16 chr4 83376223 83376492 + 4.21441993929574 NA Intergenic Intergenic 14311 NR_045450 790913 Mm.406752 NR_045450 ENSMUSG00000086321 Gm11413 - predicted gene 11413 ncRNA unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-12 chr19 44642082 44642276 + 4.21441993929574 NA Intergenic Intergenic 79325 NM_176958 319594 Mm.145278 NM_176958 ENSMUSG00000036450 Hif1an 2310046M24Rik|A830014H24Rik|FIH|FIH1 hypoxia-inducible factor 1, alpha subunit inhibitor protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-21 chr8 3433124 3433335 + 4.21441993929574 NA intron (NM_133962, intron 5 of 19) intron (NM_133962, intron 5 of 19) 34419 NM_026951 69129 Mm.45279 NM_026951 ENSMUSG00000069633 Pex11g 1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma peroxisomal biogenesis factor 11 gamma protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-3 chr10 67531178 67531379 + 4.21441993929574 NA Intergenic Intergenic -6591 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-7 chr14 54430748 54431020 + 4.21441993929574 NA promoter-TSS (NM_008608) promoter-TSS (NM_008608) -714 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-14 chr3 57301473 57301705 + 4.21441993929574 NA 5' UTR (NM_008536, exon 2 of 7) 5' UTR (NM_008536, exon 2 of 7) 399 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-5 chr12 3816999 3817575 + 4.21441993929574 NA intron (NM_001271753, intron 1 of 22) intron (NM_001271753, intron 1 of 22) 10127 NM_001271753 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-10 chr17 12768502 12768804 + 4.21441993929574 NA intron (NM_010515, intron 1 of 47) intron (NM_010515, intron 1 of 47) 1053 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-6 chr12 100324708 100324982 + 4.21441993929574 NA intron (NM_001033213, intron 19 of 19) intron (NM_001033213, intron 19 of 19) 48236 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-2 chr1 181014725 181014920 + 4.21441993929574 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 2747 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-20 chr7 25902317 25902582 + 4.21441993929574 NA intron (NM_009999, intron 1 of 8) intron (NM_009999, intron 1 of 8) 4791 NM_009999 13088 Mm.218749 NM_009999 ENSMUSG00000030483 Cyp2b10 Cyp2b|Cyp2b20|p16 cytochrome P450, family 2, subfamily b, polypeptide 10 protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-9 chr16 33832208 33832429 + 4.21441993929574 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 2653 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-17 chr4 103314296 103314542 + 4.21441993929574 NA intron (NM_025909, intron 1 of 8) intron (NM_025909, intron 1 of 8) 573 NM_025909 67013 Mm.30021 NM_025909 ENSMUSG00000035069 Oma1 2010001O09Rik|MPRP-1|ZMPOMA1 OMA1 zinc metallopeptidase protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-11 chr19 36132262 36132475 + 4.21441993929574 NA Intergenic Intergenic -12524 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-4 chr11 99986453 99986659 + 4.21441993929574 NA promoter-TSS (NM_001256057) promoter-TSS (NM_001256057) 37 NM_001256057 100504183 Mm.426560 NM_001256057 ENSMUSG00000078253 Krtap16-1 Gm11570 keratin associated protein 16-1 protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-13 chr19 53480587 53480777 + 4.21441993929574 NA Intergenic Intergenic -15886 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-18 chr4 137227447 137227810 + 4.21441993929574 NA Intergenic Intergenic -50007 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574 chr1 51849949 51850154 + 4.21441993929574 NA intron (NM_010863, intron 3 of 29) intron (NM_010863, intron 3 of 29) 65927 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-8 chr15 62046946 62047183 + 4.21441993929574 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 7807 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_15_0_3.7300400442178_1.8650200221089_4.21441993929574-19 chr6 66859945 66860260 + 4.21441993929574 NA Intergenic Intergenic -36295 NM_001177559 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak2_117_164_-0.773976108496381_6.97933415999763_4.20818784750746 chr2 168205672 168207408 + 4.20818784750746 NA intron (NM_001310086, intron 1 of 4) CpG 572 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding unique_peak2_30_66_-1.38858467133175_5.3717968547919_4.20651627396375 chr8 35494992 35495725 + 4.20651627396375 NA exon (NM_026067, exon 1 of 7) exon (NM_026067, exon 1 of 7) 175 NM_026067 67276 Mm.207534 NM_026067 ENSMUSG00000031527 Eri1 3'hexo|3110010F15Rik|Thex1|eri-1 exoribonuclease 1 protein-coding unique_peak2_31_66_-1.34310412581322_5.39453712755116_4.20651627396375 chr5 3893226 3893975 + 4.20651627396375 NA intron (NM_172135, intron 1 of 1) intron (NM_172135, intron 1 of 1) 333 NM_001013023 545725 Mm.99593 NM_172135 ENSMUSG00000040429 Mterf1a 4931431L11Rik|9230106K09Rik|Mterf|Mterf1|mTERF1b mitochondrial transcription termination factor 1a protein-coding common_peak1_321_173_0.587458896375169_7.73667294403631_4.20265376197518 chr6 52231442 52234384 + 4.20265376197518 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 2026 NM_008263 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-19 chr7 130980551 130980812 + 4.18809100057339 NA intron (NM_019564, intron 5 of 8) intron (NM_019564, intron 5 of 8) 44478 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-18 chr5 101858427 101858710 + 4.18809100057339 NA exon (NM_172882, exon 55 of 67) exon (NM_172882, exon 55 of 67) 93438 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-9 chr18 5404210 5404456 + 4.18809100057339 NA Intergenic Intergenic -69526 NM_001360447 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-3 chr10 75119130 75119456 + 4.18809100057339 NA intron (NM_001081412, intron 1 of 22) intron (NM_001081412, intron 1 of 22) 58397 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding unique_peak2_0_16_-4.32920287873957_1.92286140188056_4.18809100057339-2 chr4 108579509 108579749 + 4.18809100057339 NA promoter-TSS (NM_172697) promoter-TSS (NM_172697) 175 NM_011015 18392 Mm.294154 NM_011015 ENSMUSG00000028587 Orc1 AA545195|MmORC1|Orc1l origin recognition complex, subunit 1 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-22 chr9 64207252 64207541 + 4.18809100057339 NA intron (NM_008927, intron 3 of 10) intron (NM_008927, intron 3 of 10) -27805 NM_033607 93841 Mm.390180 NM_033607 ENSMUSG00000035337 Uchl4 - ubiquitin carboxyl-terminal esterase L4 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-5 chr13 60736104 60736345 + 4.18809100057339 NA intron (NM_134062, intron 17 of 26) intron (NM_134062, intron 17 of 26) 50140 NM_199148 218275 Mm.222427 NM_199148 ENSMUSG00000042243 BC051665 - cDNA sequence BC051665 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-11 chr2 144368578 144368772 + 4.18809100057339 NA promoter-TSS (NM_001164813) promoter-TSS (NM_001164813) -308 NM_001164813 100048644 Mm.227925 NM_001164813 ENSMUSG00000098387 Pet117 Gm20571 PET117 homolog protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339 chr1 90589076 90589375 + 4.18809100057339 NA Intergenic Intergenic -14200 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-4 chr10 81426855 81427058 + 4.18809100057339 NA intron (NM_026756, intron 1 of 8) intron (NM_026756, intron 1 of 8) 217 NM_008688 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-10 chr2 93777199 93777479 + 4.18809100057339 NA intron (NM_001355076, intron 7 of 10) intron (NM_001355076, intron 7 of 10) 45229 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-15 chr5 23843505 23843815 + 4.18809100057339 NA intron (NM_025394, intron 1 of 2) intron (NM_025394, intron 1 of 2) 485 NM_025394 66169 Mm.291868 NM_025394 ENSMUSG00000028998 Tomm7 1110020J08Rik|AW047273|Tom7 translocase of outer mitochondrial membrane 7 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-20 chr8 25325348 25325613 + 4.18809100057339 NA Intergenic Intergenic -19210 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA unique_peak2_0_16_-4.32920287873957_1.92286140188056_4.18809100057339-3 chr6 149409273 149409573 + 4.18809100057339 NA 5' UTR (NM_009753, exon 1 of 9) 5' UTR (NM_009753, exon 1 of 9) 439 NM_009753 12121 Mm.177181 NM_009753 ENSMUSG00000003452 Bicd1 B830009D06Rik|bic-D 1 BICD cargo adaptor 1 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-7 chr15 27328271 27328613 + 4.18809100057339 NA Intergenic Intergenic -138235 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-13 chr3 27595869 27596200 + 4.18809100057339 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -11039 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-21 chr9 27299844 27300149 + 4.18809100057339 NA intron (NM_001129787, intron 1 of 17) CpG 768 NM_001129787 235086 Mm.48719 NM_001033323 ENSMUSG00000034275 Igsf9b AI414108|AI854107|Gm508|mKIAA1030 immunoglobulin superfamily, member 9B protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-2 chr1 189782840 189783102 + 4.18809100057339 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 54703 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-17 chr5 64241091 64241387 + 4.18809100057339 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 10882 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-12 chr2 158220568 158220835 + 4.18809100057339 NA intron (NM_001131021, intron 1 of 15) intron (NM_001131021, intron 1 of 15) 8523 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-6 chr14 121852097 121852484 + 4.18809100057339 NA Intergenic Intergenic 25980 NR_131002 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA unique_peak2_0_16_-4.32920287873957_1.92286140188056_4.18809100057339 chr17 63676681 63676928 + 4.18809100057339 NA Intergenic Intergenic -176224 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-16 chr5 36574432 36574638 + 4.18809100057339 NA intron (NM_001113362, intron 2 of 14) intron (NM_001113362, intron 2 of 14) 7862 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-8 chr15 54363185 54363471 + 4.18809100057339 NA Intergenic Intergenic -47446 NM_173422 239447 Mm.82400 NM_173422 ENSMUSG00000038591 Colec10 CL-L1 collectin sub-family member 10 protein-coding unique_peak1_18_1_2.97621843411839_2.4881092170592_4.18809100057339-14 chr3 144541569 144542012 + 4.18809100057339 NA intron (NM_001355234, intron 1 of 6) intron (NM_001355234, intron 1 of 6) 28426 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak2_196_246_-0.621828869510002_7.63745279682968_4.18431606479898 chr10 95414260 95417471 + 4.18431606479898 NA promoter-TSS (NM_001168657) promoter-TSS (NM_001168657) 347 NM_001168655 216233 Mm.474283 NM_007706 ENSMUSG00000020027 Socs2 8030460M17|AI527257|AW108012|CIS2|Cish2|D130043N08Rik|JAB|SOCS-2|SSI-2|hg suppressor of cytokine signaling 2 protein-coding common_peak2_138_187_-0.727611800294551_7.19078295153036_4.18407699145869 chr7 141327175 141329087 + 4.18407699145869 NA promoter-TSS (NM_001282076) promoter-TSS (NM_001282076) 1 NM_027797 71448 Mm.248960 NM_027797 ENSMUSG00000025505 Tmem80 5530601I19Rik transmembrane protein 80 protein-coding unique_peak2_27_61_-1.42249721659495_5.2429477020894_4.17294976630178 chr10 30617802 30618370 + 4.17294976630178 NA intron (NM_025798, intron 1 of 4) intron (NM_025798, intron 1 of 4) 280 NM_025798 66847 Mm.46218 NM_025798 ENSMUSG00000019791 Hint3 0610010I17Rik|AV009015|HINT-3|HINT-4|HINT4 histidine triad nucleotide binding protein 3 protein-coding common_peak2_177_226_-0.645296240464232_7.5039003670588_4.17230549120305 chr7 130644846 130646757 + 4.17230549120305 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -46755 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding unique_peak1_52_13_1.63841513321226_4.62656248866373_4.16805432056001-2 chr3 37369914 37370294 + 4.16805432056001 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 21451 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak1_52_13_1.63841513321226_4.62656248866373_4.16805432056001 chr7 139208228 139208564 + 4.16805432056001 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) -4592 NM_027164 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding unique_peak1_52_13_1.63841513321226_4.62656248866373_4.16805432056001 chr2 135524933 135525810 + 4.16805432056001 NA Intergenic Intergenic 57849 NR_015544 320684 Mm.421433 NR_015544 ENSMUSG00000085631 9630028H03Rik - RIKEN cDNA 9630028H03 gene ncRNA unique_peak1_53_13_1.66519192884256_4.63995088647888_4.16805432056001 chr8 54551379 54552119 + 4.16805432056001 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 1418 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_102_38_1.11218514619598_5.84149479196024_4.16202682498725 chr3 79286533 79287212 + 4.16202682498725 NA Intergenic CpG -58504 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding common_peak1_98_36_1.13139324142302_5.77514998634046_4.15797022084184 chr19 5346182 5347079 + 4.15797022084184 NA 3' UTR (NM_028623, exon 3 of 3) 3' UTR (NM_028623, exon 3 of 3) 2944 NM_028623 73720 Mm.36816 NM_028623 ENSMUSG00000024846 Cst6 1110017E11Rik|N28197|ichq cystatin E/M protein-coding common_peak1_40_78_-1.22576620100342_5.69089764767539_4.15763316026371 chr4 15957926 15958482 + 4.15763316026371 NA intron (NM_013752, intron 1 of 15) CpG 237 NM_013752 27354 Mm.20866 NM_013752 ENSMUSG00000028224 Nbn Nbs1 nibrin protein-coding unique_peak2_23_56_-1.52201436771949_5.07188283030499_4.15660607841328 chr10 108535559 108536486 + 4.15660607841328 NA intron (NM_001358501, intron 9 of 10) intron (NM_001358501, intron 9 of 10) 164138 NM_203660 368203 Mm.452758 NM_203660 ENSMUSG00000112039 Gm5136 C6.1AL|EG368203 predicted gene 5136 protein-coding common_peak1_172_79_0.818508944979492_6.73118256737711_4.14707435720791 chr9 106368836 106370936 + 4.14707435720791 NA intron (NM_153459, intron 1 of 2) intron (NM_153459, intron 1 of 2) 1254 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673-6 chr5 35583204 35583603 + 4.1393347358673 NA non-coding (NR_045807, exon 4 of 4) non-coding (NR_045807, exon 4 of 4) 369 NM_030721 80911 Mm.291503 NM_030721 ENSMUSG00000029098 Acox3 BI685180|EST-s59|PCOX acyl-Coenzyme A oxidase 3, pristanoyl protein-coding unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673-7 chr8 4239921 4240380 + 4.1393347358673 NA promoter-TSS (NM_001291778) promoter-TSS (NM_001291778) 45 NM_001291778 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673 chr1 33725507 33725992 + 4.1393347358673 NA intron (NM_001159729, intron 4 of 7) intron (NM_001159729, intron 4 of 7) 5330 NM_001159729 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673-3 chr11 23074077 23074716 + 4.1393347358673 NA Intergenic Intergenic 61009 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673-4 chr11 119862898 119863300 + 4.1393347358673 NA intron (NM_028898, intron 20 of 33) intron (NM_028898, intron 20 of 33) -19190 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673-2 chr1 90229063 90229643 + 4.1393347358673 NA Intergenic Intergenic 25373 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak1_33_5_2.2248683566153_3.6973966790288_4.1393347358673-5 chr2 165665736 165666447 + 4.1393347358673 NA intron (NM_001271962, intron 2 of 15) intron (NM_001271962, intron 2 of 15) 10793 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak2_69_111_-0.963053909085045_6.32582796751508_4.13782735591887 chr6 146959068 146960169 + 4.13782735591887 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -5197 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_14_42_-1.78867722992972_4.53192613973724_4.134031880362 chr2 180440482 180441437 + 4.134031880362 NA Intergenic Intergenic -15286 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak2_13_42_-1.88751068133693_4.48250941403363_4.134031880362 chr5 123137101 123137819 + 4.134031880362 NA Intergenic Intergenic -4733 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding unique_peak1_50_12_1.69022674142281_4.5455530888525_4.13403188036199 chr11 80523058 80523693 + 4.13403188036199 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -14269 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak1_698_714_-0.341054374457215_9.31127224443714_4.13287112402201 chr15 64380387 64384634 + 4.13287112402201 NA intron (NM_001276461, intron 1 of 28) CpG 409 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_179_228_-0.641945599816848_7.51823098818852_4.13034629584778 chr15 99818083 99819971 + 4.13034629584778 NA intron (NM_001113545, intron 4 of 10) intron (NM_001113545, intron 4 of 10) 1122 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_146_194_-0.700191547729346_7.25723453988494_4.12382427134343 chr17 69416731 69418170 + 4.12382427134343 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 1003 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA common_peak2_302_348_-0.503804704298028_8.19518087406064_4.12331234208104 chr8 102782849 102785684 + 4.12331234208104 NA intron (NM_009866, intron 1 of 12) intron (NM_009866, intron 1 of 12) 845 NM_009866 12552 Mm.1571 NM_009866 ENSMUSG00000031673 Cdh11 Cad11|OSF-4 cadherin 11 protein-coding common_peak1_299_160_0.598107627118659_7.62997069167395_4.12139159082579 chr3 101602823 101604680 + 4.12139159082579 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 956 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_81_27_1.26360464554283_5.43915724482902_4.11766476295455 chr14 63543401 63544407 + 4.11766476295455 NA promoter-TSS (NM_177594) promoter-TSS (NM_177594) 49 NM_177594 210376 Mm.441613 NM_177594 ENSMUSG00000035078 Mtmr9 9430075G12Rik|AA516943|AF073881|LIP-STYX|MTMR8|mMTMH3 myotubularin related protein 9 protein-coding unique_peak1_59_16_1.53601472437555_4.85547020343811_4.11413917592912-2 chr13 96388336 96389019 + 4.11413917592912 NA intron (NM_026173, intron 1 of 12) intron (NM_026173, intron 1 of 12) 383 NM_026173 67463 Mm.86472 NM_026173 ENSMUSG00000021671 Poc5 1200014M14Rik|AV144706 POC5 centriolar protein protein-coding unique_peak1_59_16_1.53601472437555_4.85547020343811_4.11413917592912 chr1 155741289 155741980 + 4.11413917592912 NA intron (NM_010712, intron 1 of 5) CpG 393 NM_010712 16872 Mm.103624 NM_010712 ENSMUSG00000026468 Lhx4 A330062J17Rik|Gsh-4|Gsh4 LIM homeobox protein 4 protein-coding common_peak2_66_108_-0.986631307136538_6.27486867120866_4.1120532858218 chr13 24373971 24375249 + 4.1120532858218 NA intron (NM_001284519, intron 2 of 17) intron (NM_001284519, intron 2 of 17) -40512 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding unique_peak1_48_11_1.7483956426449_4.4591603220436_4.10519998339124 chr14 70323867 70324393 + 4.10519998339124 NA intron (NM_144808, intron 2 of 9) intron (NM_144808, intron 2 of 9) 24303 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_47_11_1.71885816615085_4.44439158379658_4.10519998339124 chr14 120476730 120477371 + 4.10519998339124 NA Intergenic Intergenic -1411 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding unique_peak1_47_11_1.71885816615085_4.44439158379658_4.10519998339124 chr15 88957977 88958457 + 4.10519998339124 NA exon (NM_133241, exon 11 of 12) exon (NM_133241, exon 11 of 12) -3799 NM_172818 239591 Mm.86807 NM_172818 ENSMUSG00000022388 Ttll8 1700019P01Rik|4933401B17 tubulin tyrosine ligase-like family, member 8 protein-coding common_peak2_22_54_-1.53145143215516_5.01563399744708_4.09923233888538 chr13 59874953 59875462 + 4.09923233888538 NA Intergenic Intergenic -52060 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding unique_peak2_22_54_-1.53145143215516_5.01563399744708_4.09923233888538 chr4 48279066 48279525 + 4.09923233888538 NA promoter-TSS (NM_010569) promoter-TSS (NM_010569) 294 NM_029572 76299 Mm.317701 NM_029572 ENSMUSG00000028343 Erp44 1110001E24Rik|AI849526|AL033348|Txndc4 endoplasmic reticulum protein 44 protein-coding common_peak1_447_259_0.481111362470493_8.2629234942637_4.09481180612411 chr15 76193102 76196209 + 4.09481180612411 NA intron (NM_001163540, intron 2 of 32) intron (NM_001163540, intron 2 of 32) 1055 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak2_6_30_-2.40838725744846_3.75000268166264_4.0937649558367 chr17 73668107 73668622 + 4.0937649558367 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 42087 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding unique_peak1_35_6_2.0843563266151_3.84953308536515_4.0937649558367 chr16 92554564 92555112 + 4.0937649558367 NA Intergenic Intergenic 56691 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding unique_peak1_35_6_2.0843563266151_3.84953308536515_4.0937649558367-2 chr18 35847594 35848120 + 4.0937649558367 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) -6830 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_88_31_1.18830722639993_5.59415361319996_4.0914635553006 chr7 30194364 30195001 + 4.0914635553006 NA intron (NM_009795, intron 1 of 10) intron (NM_009795, intron 1 of 10) 471 NM_009795 12336 Mm.439782 NM_009795 ENSMUSG00000001794 Capns1 Capa-4|Capa4|Capn4|Cdps|Css1|D7Ertd146e calpain, small subunit 1 protein-coding unique_peak2_3_23_-2.84081249735687_3.16455625204272_4.08960682824985 chr5 111059395 111059598 + 4.08960682824985 NA intron (NM_001267622, intron 2 of 22) intron (NM_001267622, intron 2 of 22) 55352 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-3 chr15 11697704 11698056 + 4.08960682824984 NA Intergenic Intergenic 207794 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-4 chr15 31236888 31237218 + 4.08960682824984 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 12668 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-11 chr8 105185987 105186338 + 4.08960682824984 NA intron (NM_001161458, intron 3 of 5) (TTGG)n|Simple_repeat|Simple_repeat 15488 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-2 chr11 4311259 4311553 + 4.08960682824984 NA Intergenic Intergenic 44610 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-6 chr15 50889524 50889822 + 4.08960682824984 NA promoter-TSS (NR_035444) promoter-TSS (NR_035444) 368 NM_032000 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e transcriptional repressor GATA binding 1 protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-7 chr17 73707943 73708164 + 4.08960682824984 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 2398 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984 chr10 86612696 86613164 + 4.08960682824984 NA Intergenic Intergenic -72597 NR_015572 66263 Mm.392261 NR_015572 ENSMUSG00000097412 1810014B01Rik - RIKEN cDNA 1810014B01 gene pseudo unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-9 chr5 35688604 35688915 + 4.08960682824984 NA Intergenic Intergenic -8979 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-10 chr5 36072310 36072776 + 4.08960682824984 NA intron (NM_030889, intron 4 of 26) intron (NM_030889, intron 4 of 26) -131478 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-8 chr19 16926858 16927273 + 4.08960682824984 NA Intergenic Intergenic -29053 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_27_3_2.53169909379193_3.26584954689596_4.08960682824984-5 chr15 36865667 36865941 + 4.08960682824984 NA Intergenic Intergenic -68875 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_41_79_-1.20939339886798_5.71723139545337_4.0862182132045 chr6 91370031 91371186 + 4.0862182132045 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 40761 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding unique_peak1_96_35_1.14168555296877_5.7407677779267_4.08621821320449 chr5 65456287 65458117 + 4.08621821320449 NA intron (NM_133697, intron 3 of 4) intron (NM_133697, intron 3 of 4) -21360 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding unique_peak1_45_10_1.78342168315896_4.35114246021678_4.08266706494567 chr1 91819967 91820747 + 4.08266706494567 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 18896 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding unique_peak1_45_10_1.78342168315896_4.35114246021678_4.08266706494567-2 chr5 35661654 35662226 + 4.08266706494567 NA 3' UTR (NM_001042615, exon 7 of 7) 3' UTR (NM_001042615, exon 7 of 7) 17840 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding unique_peak1_74_24_1.29927827460504_5.29349532707724_4.07609736578984 chr8 108748131 108748603 + 4.07609736578984 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 33723 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_75_24_1.31825228519718_5.30298233237331_4.07609736578984 chr19 36554811 36555323 + 4.07609736578984 NA intron (NM_001163471, intron 1 of 20) intron (NM_001163471, intron 1 of 20) 428 NM_172637 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain E3 ubiquitin protein ligase 2 protein-coding common_peak1_141_61_0.903369451746613_6.40588103626018_4.07431776812821 chr6 34862446 34863744 + 4.07431776812821 NA promoter-TSS (NM_197986) promoter-TSS (NM_197986) -51 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_289_154_0.60433555571042_7.57829218312945_4.07295527404247 chr15 75940564 75942688 + 4.07295527404247 NA intron (NM_030199, intron 1 of 1) intron (NM_030199, intron 1 of 1) 674 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding unique_peak1_38_7_2.00637377668257_4.00318688834128_4.07016573886257 chr19 47884477 47884925 + 4.07016573886257 NA exon (NM_026619, exon 8 of 9) exon (NM_026619, exon 8 of 9) 18907 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding unique_peak1_43_9_1.8572473077097_4.25055174874221_4.06788929322894-2 chr15 62133963 62134375 + 4.06788929322894 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 85282 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_43_9_1.8572473077097_4.25055174874221_4.06788929322894 chr10 67503567 67504233 + 4.06788929322894 NA Intergenic Intergenic -33969 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_56_15_1.5499990567726_4.7749995283863_4.06657318675301-2 chr8 47917105 47917685 + 4.06657318675301 NA intron (NM_133791, intron 2 of 22) intron (NM_133791, intron 2 of 22) 73156 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_56_15_1.5499990567726_4.7749995283863_4.06657318675301 chr5 110879423 110880010 + 4.06657318675301 NA promoter-TSS (NM_001267622) promoter-TSS (NM_001267622) -87 NM_001267622 209683 Mm.295660 NM_024477 ENSMUSG00000033209 Ttc28 2310015L07Rik|6030435N04|AI428795|AI851761|BC002262|TPRBK tetratricopeptide repeat domain 28 protein-coding unique_peak1_56_15_1.5499990567726_4.7749995283863_4.06657318675301 chr15 85684892 85685553 + 4.06657318675301 NA Intergenic Intergenic -18551 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak1_40_8_1.90808954573137_4.123969774308_4.06282269221159 chr4 128805143 128805812 + 4.06282269221159 NA intron (NM_001081098, intron 1 of 8) intron (NM_001081098, intron 1 of 8) 635 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding unique_peak2_9_34_-2.07253109440005_4.09301746974494_4.06282269221158 chr12 101798815 101799156 + 4.06282269221158 NA intron (NM_001361987, intron 4 of 10) intron (NM_001361987, intron 4 of 10) 19499 NM_001361987 23876 Mm.288381 NM_011812 ENSMUSG00000021186 Fbln5 A55|DANCE|EVEC fibulin 5 protein-coding unique_peak2_9_34_-2.07253109440005_4.09301746974494_4.06282269221158-2 chr18 61096210 61096590 + 4.06282269221158 NA Intergenic Intergenic -9172 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_52_92_-1.09338875583817_5.99246443318895_4.06021574879918 chr4 155891910 155892764 + 4.06021574879918 NA promoter-TSS (NM_001033490) promoter-TSS (NM_001033490) 462 NM_207223 140500 Mm.219591 NM_207223 ENSMUSG00000029033 Acap3 Centb5|Kiaa1716-hp|mKIAA1716 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding unique_peak1_78_26_1.26268016411181_5.38622758421937_4.05066812889365 chr15 102802664 102803502 + 4.05066812889365 NA Intergenic Intergenic -56174 NR_104334 102216269 NR_104334 Gm38436 Cistr|Cistr-act predicted gene, 38436 ncRNA unique_peak2_21_52_-1.54169007239289_4.95707541836675_4.04334585201375 chr17 42577274 42578356 + 4.04334585201375 NA intron (NM_181753, intron 5 of 6) intron (NM_181753, intron 5 of 6) 33498 NM_181753 353344 Mm.184937 NM_181753 ENSMUSG00000043972 Opn5 Gpr136|Neuropsin|PGR12|TMEM13 opsin 5 protein-coding common_peak1_62_18_1.44544278480325_4.97064890584521_4.04334585201374 chr15 73060661 73061001 + 4.04334585201374 NA intron (NM_001164641, intron 1 of 17) intron (NM_001164641, intron 1 of 17) 373 NM_001164641 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak2_116_47_0.995191898615622_6.08255845002897_4.02190371288676 chr2 27886532 27887146 + 4.02190371288676 NA exon (NM_015734, exon 1 of 66) exon (NM_015734, exon 1 of 66) 414 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak2_16_45_-1.70667611914732_4.67022389648335_4.02188667233815 chr15 87566649 87567237 + 4.02188667233815 NA intron (NM_001252310, intron 1 of 3) intron (NM_001252310, intron 1 of 3) 22644 NM_001252310 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding common_peak1_187_89_0.767698247825892_6.87570222024262_4.02046988557291 chr3 95282277 95283572 + 4.02046988557291 NA promoter-TSS (NM_199475) promoter-TSS (NM_199475) -11 NM_133858 75007 Mm.279287 NM_133858 ENSMUSG00000038712 Mindy1 1810005H09Rik|4930504E06Rik|AA562754|AA960384|AW561904|Fam63a|cI-40|mKIAA1390|ni MINDY lysine 48 deubiquitinase 1 protein-coding common_peak1_125_52_0.958394864110392_6.20711788661839_4.01367412082816 chr19 56934581 56935834 + 4.01367412082816 NA intron (NM_001177796, intron 6 of 19) intron (NM_001177796, intron 6 of 19) 60791 NM_172840 240675 Mm.129534 NM_172840 ENSMUSG00000025082 Vwa2 Amaco von Willebrand factor A domain containing 2 protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-3 chr13 96982039 96982572 + 4.01305082679061 NA Intergenic Intergenic 52057 NM_025585 66479 Mm.390629 NM_025585 ENSMUSG00000052075 1700029F12Rik - RIKEN cDNA 1700029F12 gene protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-6 chr3 131366791 131367402 + 4.01305082679061 NA Intergenic L2b|LINE|L2 -22173 NM_028943 74442 Mm.273360 NM_028943 ENSMUSG00000050931 Sgms2 4933405A16Rik|5133401H06Rik|AI854299 sphingomyelin synthase 2 protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-5 chr15 86186632 86186840 + 4.01305082679061 NA promoter-TSS (NM_145475) promoter-TSS (NM_145475) -595 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061 chr10 14332271 14332539 + 4.01305082679061 NA Intergenic Intergenic 212631 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-4 chr14 67906680 67907003 + 4.01305082679061 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) 26731 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-9 chr8 18620864 18621180 + 4.01305082679061 NA intron (NM_173189, intron 3 of 13) intron (NM_173189, intron 3 of 13) 25891 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-8 chr7 43483137 43483468 + 4.01305082679061 NA intron (NM_001164518, intron 1 of 7) intron (NM_001164518, intron 1 of 7) 6721 NM_001164518 210094 Mm.228087 NM_001164518 ENSMUSG00000013367 Iglon5 A230106M20Rik|Gm1431 IgLON family member 5 protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-2 chr10 69778957 69779334 + 4.01305082679061 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) -146387 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_23_2_2.72591314572409_2.9479190735832_4.01305082679061-7 chr4 126047009 126047222 + 4.01305082679061 NA exon (NM_025544, exon 1 of 8) exon (NM_025544, exon 1 of 8) 187 NM_025544 66407 Mm.195628 NM_025544 ENSMUSG00000028861 Mrps15 1500003E24Rik|2410002B11Rik|Mprs15 mitochondrial ribosomal protein S15 protein-coding common_peak2_400_439_-0.436648967118085_8.56303522996562_4.00863743554403 chr2 173261909 173264974 + 4.00863743554403 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 13092 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_100_145_-0.820326659622604_6.77966122906872_4.00856588223364 chr10 17005803 17008903 + 4.00856588223364 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 88429 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_231_278_-0.563318249598408_7.84246218702998_4.00678900033704 chr12 76368894 76371354 + 4.00678900033704 NA promoter-TSS (NM_001172104) promoter-TSS (NM_001172104) -142 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding common_peak2_89_133_-0.861776022604433_6.63520117915556_4.00379309724083 chr1 97659473 97661798 + 4.00379309724083 NA intron (NM_133825, intron 1 of 2) intron (NM_133825, intron 1 of 2) 1041 NM_001355074 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_244_125_0.661625159473529_7.30809250323668_4.00367911539024 chr19 53531112 53533072 + 4.00367911539024 NA intron (NM_001085390, intron 1 of 3) intron (NM_001085390, intron 1 of 3) 2774 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_138_60_0.8962397138202_6.37885719447299_4.00090811540082 chr14 121238126 121239236 + 4.00090811540082 NA exon (NM_134082, exon 10 of 27) exon (NM_134082, exon 10 of 27) -10025 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak1_139_185_-0.701912777708715_7.18820242225367_3.99723619710516 chr9 71321824 71323056 + 3.99723619710516 NA Intergenic Intergenic 106651 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak1_66_20_1.38923559486163_5.08693522020957_3.98923275154812 chr8 84065784 84066354 + 3.98923275154812 NA promoter-TSS (NM_009055) promoter-TSS (NM_009055) -767 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding unique_peak1_66_20_1.38923559486163_5.08693522020957_3.98923275154812 chr1 53838484 53839171 + 3.98923275154812 NA intron (NM_001001883, intron 23 of 28) intron (NM_001001883, intron 23 of 28) -10597 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_60_17_1.47723106786056_4.90854053537259_3.98915980442696 chr7 125707002 125707604 + 3.98915980442696 NA promoter-TSS (NM_001081022) promoter-TSS (NM_001081022) 385 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding unique_peak1_51_13_1.61112827282426_4.61291905846974_3.98058741041079 chr9 57588311 57589137 + 3.98058741041079 NA promoter-TSS (NM_027895) promoter-TSS (NM_027895) -728 NM_027895 71742 Mm.155877 NM_027895 ENSMUSG00000032308 Ulk3 1200015E14Rik unc-51-like kinase 3 protein-coding unique_peak2_15_43_-1.7293915744195_4.59473583142755_3.98058741041078 chr9 50528386 50528711 + 3.98058741041078 NA promoter-TSS (NM_011220) promoter-TSS (NM_011220) 93 NM_011220 19286 Mm.35856 NM_011220 ENSMUSG00000032067 Pts PTPS 6-pyruvoyl-tetrahydropterin synthase protein-coding common_peak2_435_252_0.481591351287648_8.22378925033813_3.97958298647936 chr8 117257099 117260136 + 3.97958298647936 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 1598 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_118_163_-0.753117077280746_6.98099346597771_3.97919613755731 chr1 43168906 43169816 + 3.97919613755731 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) -5400 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_4_25_-2.63663281602293_3.38212331012963_3.9780981129625 chr11 88215192 88215776 + 3.9780981129625 NA Intergenic Intergenic 11096 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding unique_peak1_29_4_2.30860445031177_3.47623032004325_3.9780981129625 chr1 89818358 89818791 + 3.9780981129625 NA intron (NM_001037136, intron 12 of 16) intron (NM_001037136, intron 12 of 16) 112602 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding unique_peak1_29_4_2.30860445031177_3.47623032004325_3.9780981129625-3 chr3 21762095 21762583 + 3.9780981129625 NA Intergenic Intergenic -314313 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_29_4_2.30860445031177_3.47623032004325_3.9780981129625-5 chr5 35968545 35969113 + 3.9780981129625 NA intron (NM_027373, intron 9 of 16) intron (NM_027373, intron 9 of 16) 75510 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak1_29_4_2.30860445031177_3.47623032004325_3.9780981129625-2 chr2 118902138 118902510 + 3.9780981129625 NA intron (NM_001045523, intron 1 of 6) CpG 709 NM_001045523 228536 Mm.330487 NM_001045523 ENSMUSG00000040007 Bahd1 AL022997|AW541238|Gm117|mKIAA0945 bromo adjacent homology domain containing 1 protein-coding unique_peak1_29_4_2.30860445031177_3.47623032004325_3.9780981129625-4 chr3 27638681 27639053 + 3.9780981129625 NA intron (NM_001356953, intron 3 of 26) intron (NM_001356953, intron 3 of 26) -53872 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak1_158_72_0.829726119044054_6.60468761840204_3.96868803451023 chr6 72438317 72439513 + 3.96868803451023 NA non-coding (NR_046011, exon 1 of 1) non-coding (NR_046011, exon 1 of 1) 232 NR_046011 78108 Mm.440743 NR_046011 ENSMUSG00000108591 Particl 4930414L22Rik|AI449819 promoter of Mat2a antisense radiation induced circulating long non-coding RNA ncRNA common_peak1_118_48_0.98972508322213_6.10957238572627_3.96845666072387 chr10 97062340 97063811 + 3.96845666072387 NA Intergenic Intergenic 27307 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA unique_peak1_80_27_1.24602753107001_5.43036868759261_3.96462675495423 chr10 24396417 24397222 + 3.96462675495423 NA Intergenic Intergenic 173302 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_126_53_0.942752119410447_6.22626356186869_3.96458226257432 chr11 77215659 77217221 + 3.96458226257432 NA promoter-TSS (NM_177710) promoter-TSS (NM_177710) 15 NM_177710 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot protein phosphatase 2 protein-coding common_peak1_106_151_-0.795761476414427_6.85004677523637_3.95009482323396 chr15 64363052 64363923 + 3.95009482323396 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 19432 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_26_58_-1.40304121888844_5.18112243991762_3.94835329416592 chr18 66330895 66331427 + 3.94835329416592 NA Intergenic Intergenic -39323 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_42_78_-1.15753821796767_5.72501163919327_3.94531595418454 chr13 41705118 41705630 + 3.94531595418454 NA Intergenic Intergenic 99158 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_94_35_1.11184037228347_5.72584518758405_3.94531595418454 chr18 70643497 70644472 + 3.94531595418454 NA Intergenic Intergenic 75692 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_87_31_1.17212042302382_5.58606021151191_3.94503765633508 chr4 116463617 116464100 + 3.94503765633508 NA exon (NM_008641, exon 1 of 29) exon (NM_008641, exon 1 of 29) 323 NM_001042743 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding unique_peak1_87_31_1.17212042302382_5.58606021151191_3.94503765633508 chr16 58702274 58703756 + 3.94503765633508 NA Intergenic LTR48|LTR|ERV1 15709 NM_001162955 71223 Mm.359970 NM_001162955 ENSMUSG00000047293 Gpr15 4933439K08Rik G protein-coupled receptor 15 protein-coding common_peak1_131_56_0.920066011086528_6.29292301970801_3.94385330967223 chr8 70469133 70470608 + 3.94385330967223 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 7073 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding unique_peak2_14_41_-1.75472989800639_4.51495247377557_3.94331175509382 chr19 45056435 45057140 + 3.94331175509382 NA TTS (NM_001178013) TTS (NM_001178013) 9211 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_14_41_-1.75472989800639_4.51495247377557_3.94331175509382 chr2 104815467 104816224 + 3.94331175509382 NA intron (NM_001123327, intron 1 of 11) intron (NM_001123327, intron 1 of 11) 851 NM_001123327 99003 Mm.274314 NM_001123327 ENSMUSG00000074994 Qser1 4732486I23Rik|AI502974 glutamine and serine rich 1 protein-coding unique_peak2_14_41_-1.75472989800639_4.51495247377557_3.94331175509382-2 chr2 50448755 50449392 + 3.94331175509382 NA Intergenic Intergenic 94048 NR_154590 102634280 NR_154590 Gm48908 - predicted gene 48908 ncRNA common_peak2_180_227_-0.627695424106615_7.51904230211143_3.94215643305494 chr10 68247139 68249974 + 3.94215643305494 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 30170 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_58_16_1.51193824407234_4.84343196328651_3.936930499713 chr16 85152044 85152406 + 3.936930499713 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 21482 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_63_19_1.39400199018394_5.01892908997934_3.93018944736487 chr8 31907171 31907692 + 3.93018944736487 NA intron (NM_178591, intron 1 of 8) intron (NM_178591, intron 1 of 8) 10772 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_186_89_0.760058139812798_6.87188216623607_3.91908764914281 chr3 130729167 130730371 + 3.91908764914281 NA intron (NM_001005859, intron 1 of 4) intron (NM_001005859, intron 1 of 4) 560 NM_001199350 619547 Mm.391636 NM_001199350 Rpl34-ps1 EG619547|Gm10239 ribosomal protein L34, pseudogene 1 protein-coding common_peak1_128_54_0.938663439338983_6.25069143319415_3.91679597206899 chr1 135768465 135769747 + 3.91679597206899 NA TTS (NM_013750) TTS (NM_013750) 3021 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak2_65_105_-0.967909449738684_6.24396572969386_3.91679597206896-2 chr5 112276717 112277436 + 3.91679597206896 NA intron (NM_001326590, intron 1 of 5) CpG 385 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_65_105_-0.967909449738684_6.24396572969386_3.91679597206896 chr17 80784794 80786254 + 3.91679597206896 NA Intergenic MIR|SINE|MIR -57499 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_59_98_-1.00587905445372_6.12641709285275_3.91655448954905 chr19 28247732 28248438 + 3.91655448954905 NA Intergenic Intergenic -236919 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_74_116_-0.927230255203642_6.40674959198158_3.91502031208382 chr19 53404629 53405697 + 3.91502031208382 NA Intergenic Intergenic -14529 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-31 chr9 110100218 110100469 + 3.91338994363176 NA intron (NM_001252682, intron 5 of 22) intron (NM_001252682, intron 5 of 22) 744 NM_001252683 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-12 chr14 75900881 75901077 + 3.91338994363176 NA intron (NM_026816, intron 7 of 7) intron (NM_026816, intron 7 of 7) 53056 NR_028481 100303751 Mm.484707 NR_028481 ENSMUSG00000065147 Snora31 MBI-161 small nucleolar RNA, H/ACA box 31 snoRNA unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-22 chr3 146675854 146676050 + 3.91338994363176 NA Intergenic Intergenic -24635 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-20 chr3 22089343 22089604 + 3.91338994363176 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 12821 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-10 chr15 53071705 53072009 + 3.91338994363176 NA intron (NM_010162, intron 10 of 10) intron (NM_010162, intron 10 of 10) 274326 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-7 chr14 28813590 28813778 + 3.91338994363176 NA Intergenic Intergenic -204524 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176 chr1 11096109 11096345 + 3.91338994363176 NA intron (NM_029525, intron 6 of 39) intron (NM_029525, intron 6 of 39) 102762 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-17 chr19 7193030 7193302 + 3.91338994363176 NA intron (NM_134147, intron 4 of 10) intron (NM_134147, intron 4 of 10) 13118 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-13 chr3 143646940 143647193 + 3.91338994363176 NA Intergenic Intergenic 65077 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-4 chr11 59902667 59902856 + 3.91338994363176 NA Intergenic Intergenic -18738 NR_130986 69854 Mm.57859 NR_130986 ENSMUSG00000085551 1810063I02Rik - RIKEN cDNA 1810063I02 gene ncRNA unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-23 chr4 95736097 95736410 + 3.91338994363176 NA intron (NM_029347, intron 6 of 10) intron (NM_029347, intron 6 of 10) 156832 NM_029347 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-2 chr1 133841988 133842212 + 3.91338994363176 NA Intergenic Intergenic 65073 NM_054076 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-26 chr9 6536455 6536716 + 3.91338994363176 NA Intergenic Intergenic -270038 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-4 chr13 21401422 21401754 + 3.91338994363176 NA intron (NM_001145778, intron 1 of 5) intron (NM_001145778, intron 1 of 5) 1167 NM_001145778 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-5 chr11 88520264 88520485 + 3.91338994363176 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -98877 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_0_15_-4.24174003748923_1.87912998125539_3.91338994363176-2 chr5 115514995 115515258 + 3.91338994363176 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 8450 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-5 chr15 62628507 62628734 + 3.91338994363176 NA Intergenic Intergenic -409169 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-30 chr9 118801501 118801740 + 3.91338994363176 NA intron (NM_001113514, intron 3 of 13) intron (NM_001113514, intron 3 of 13) 89928 NM_001113514 104099 Mm.335520 NM_133721 ENSMUSG00000039115 Itga9 (alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e integrin alpha 9 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-11 chr16 38012927 38013159 + 3.91338994363176 NA Intergenic Intergenic -4280 NR_040565 75175 Mm.399335 NR_040565 4930542C21Rik - RIKEN cDNA 4930542C21 gene ncRNA unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-4 chr11 97455857 97456199 + 3.91338994363176 NA intron (NM_021493, intron 5 of 18) intron (NM_021493, intron 5 of 18) 5868 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-18 chr19 38002862 38003088 + 3.91338994363176 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 40602 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176 chr1 21000897 21001093 + 3.91338994363176 NA TTS (NM_177409) TTS (NM_177409) 49369 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-8 chr14 32051945 32052148 + 3.91338994363176 NA intron (NM_030166, intron 6 of 9) intron (NM_030166, intron 6 of 9) 22943 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-29 chr7 144670788 144671050 + 3.91338994363176 NA intron (NM_001242349, intron 2 of 24) intron (NM_001242349, intron 2 of 24) 67673 NM_178642 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-2 chr10 8772170 8772371 + 3.91338994363176 NA intron (NM_175155, intron 8 of 19) intron (NM_175155, intron 8 of 19) 113800 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-14 chr15 84639480 84639669 + 3.91338994363176 NA Intergenic Intergenic -23632 NM_001346662 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-2 chr1 82588205 82588525 + 3.91338994363176 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 1444 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176 chr1 7397631 7397836 + 3.91338994363176 NA Intergenic Intergenic 308813 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-19 chr2 125014033 125014237 + 3.91338994363176 NA Intergenic Intergenic -53992 NM_175034 317750 Mm.330538 NM_175034 ENSMUSG00000035183 Slc24a5 F630045L20Rik|JSX|NCKX5|NCX5|Oca6 solute carrier family 24, member 5 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-27 chr9 88241885 88242104 + 3.91338994363176 NA Intergenic Intergenic -85615 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-25 chr6 12259580 12259845 + 3.91338994363176 NA Intergenic Intergenic -150132 NR_003631 625347 Mm.389084 NM_001039041 ENSMUSG00000057223 Gm6578 EG625347 mitochondrial ribosomal protein L32 pseudogene pseudo unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-9 chr14 76911487 76911694 + 3.91338994363176 NA Intergenic Intergenic 125027 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-5 chr12 113154160 113154436 + 3.91338994363176 NA TTS (NM_007763) TTS (NM_007763) -2123 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 Tedc1 4930427A07Rik|AA536649|mFLJ00116 tubulin epsilon and delta complex 1 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-19 chr9 66974492 66974795 + 3.91338994363176 NA intron (NM_030717, intron 2 of 5) intron (NM_030717, intron 2 of 5) 841 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-17 chr7 116247067 116247267 + 3.91338994363176 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -9391 NM_001305186 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-6 chr14 7943078 7943344 + 3.91338994363176 NA intron (NM_001081427, intron 43 of 45) intron (NM_001081427, intron 43 of 45) 50971 NM_007870 13421 Mm.272258 NM_007870 ENSMUSG00000025279 Dnase1l3 DNasegamma|Dhp2|Lsd deoxyribonuclease 1-like 3 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-19 chr3 41602822 41603012 + 3.91338994363176 NA intron (NM_001130184, intron 8 of 10) intron (NM_001130184, intron 8 of 10) 38037 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-30 chr9 66784322 66784612 + 3.91338994363176 NA intron (NM_177583, intron 5 of 5) intron (NM_177583, intron 5 of 5) 10956 NM_177583 208117 Mm.41291 NM_177583 ENSMUSG00000032375 Aph1b 2310057K14Rik|Aph1c aph1 homolog B, gamma secretase subunit protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-11 chr14 70574496 70574724 + 3.91338994363176 NA Intergenic Intergenic -3214 NM_153136 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-23 chr6 17942251 17942562 + 3.91338994363176 NA intron (NM_022332, intron 15 of 15) intron (NM_022332, intron 15 of 15) 88039 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding unique_peak2_0_15_-4.24174003748923_1.87912998125539_3.91338994363176-3 chrX 99602477 99602680 + 3.91338994363176 NA Intergenic Intergenic -131843 NM_008853 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-22 chr4 144972279 144972478 + 3.91338994363176 NA TTS (NM_001276502) TTS (NM_001276502) 79241 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-20 chrX 95164871 95165159 + 3.91338994363176 NA intron (NM_001290384, intron 1 of 9) intron (NM_001290384, intron 1 of 9) 1524 NM_001290385 236915 Mm.44841 NM_001033329 ENSMUSG00000025656 Arhgef9 9630036L12Rik CDC42 guanine nucleotide exchange factor (GEF) 9 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-31 chrX 56721518 56721785 + 3.91338994363176 NA Intergenic Intergenic -10110 NM_010211 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-27 chr6 85342870 85343116 + 3.91338994363176 NA intron (NM_001003955, intron 3 of 5) intron (NM_001003955, intron 3 of 5) -6620 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-6 chr11 105467435 105467632 + 3.91338994363176 NA Intergenic Intergenic -10798 NM_001039242 632687 Mm.121570 NM_172568 ENSMUSG00000078627 March10 4933417C16Rik|AV039223|Rnf190 membrane-associated ring finger (C3HC4) 10 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-8 chr14 36961214 36961413 + 3.91338994363176 NA intron (NM_027045, intron 1 of 10) intron (NM_027045, intron 1 of 10) 7451 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-17 chr2 52979108 52979364 + 3.91338994363176 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 121368 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-21 chr3 37303461 37303669 + 3.91338994363176 NA Intergenic Intergenic 8881 NM_145825 207175 Mm.344708 NM_145825 ENSMUSG00000045031 Cetn4 - centrin 4 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-9 chr3 60530707 60530912 + 3.91338994363176 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 29630 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-9 chr14 34357541 34357861 + 3.91338994363176 NA Intergenic Intergenic -2308 NM_183278 69134 Mm.27156 NM_183278 ENSMUSG00000043681 Fam25c 2200001I15Rik|Fam25 family with sequence similarity 25, member C protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-12 chr3 96674923 96675234 + 3.91338994363176 NA intron (NM_001356540, intron 1 of 13) intron (NM_001356540, intron 1 of 13) 4947 NM_001356540 213121 Mm.39732 NM_001081139 ENSMUSG00000038354 Ankrd35 4732436F15Rik ankyrin repeat domain 35 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-14 chr18 32647955 32648155 + 3.91338994363176 NA Intergenic Intergenic -88021 NM_001347610 71683 Mm.292145 NM_027863 ENSMUSG00000090523 Gypc 0610037F22Rik|Cd236r glycophorin C protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-28 chr9 105016538 105016777 + 3.91338994363176 NA intron (NM_028719, intron 11 of 15) intron (NM_028719, intron 11 of 15) -36611 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-10 chr3 84451502 84451711 + 3.91338994363176 NA intron (NM_001033301, intron 9 of 11) intron (NM_001033301, intron 9 of 11) 27885 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-13 chr15 51256255 51256502 + 3.91338994363176 NA intron (NR_045092, intron 4 of 5) intron (NR_045092, intron 4 of 5) 139232 NR_045092 100502643 Mm.131987 NR_045092 ENSMUSG00000115654 Gm19303 - predicted gene, 19303 ncRNA unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-28 chr6 88909626 88909983 + 3.91338994363176 NA intron (NM_011906, intron 7 of 11) intron (NM_011906, intron 7 of 11) 7553 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-14 chr4 145221886 145222165 + 3.91338994363176 NA intron (NM_011610, intron 8 of 9) intron (NM_011610, intron 8 of 9) 24845 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-18 chr2 135680759 135681035 + 3.91338994363176 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) 21350 NM_001355156 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-29 chr9 110751525 110751765 + 3.91338994363176 NA Intergenic Intergenic -4500 NM_011199 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-3 chr10 56539122 56539592 + 3.91338994363176 NA Intergenic Intergenic 107376 NR_152768 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-25 chr8 123142172 123142481 + 3.91338994363176 NA TTS (NM_020564) TTS (NM_020564) 12220 NR_106048 102465655 NR_106048 ENSMUSG00000098582 Mir7080 Gm27911|mmu-mir-7080 microRNA 7080 ncRNA unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-3 chr10 71149525 71149755 + 3.91338994363176 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 10050 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-24 chr4 148604662 148604889 + 3.91338994363176 NA TTS (NM_010767) TTS (NM_010767) 2231 NM_001003893 17175 Mm.378962 NM_010767 ENSMUSG00000028979 Masp2 MASP-2|MAp19 mannan-binding lectin serine peptidase 2 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-18 chr9 23464912 23465123 + 3.91338994363176 NA intron (NM_028472, intron 13 of 14) intron (NM_028472, intron 13 of 14) 241941 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-3 chr10 122889787 122890050 + 3.91338994363176 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 95806 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-15 chr5 136476943 136477166 + 3.91338994363176 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 88927 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-20 chr3 55118482 55118702 + 3.91338994363176 NA intron (NM_001144987, intron 2 of 8) intron (NM_001144987, intron 2 of 8) 6426 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-15 chr18 64820893 64821158 + 3.91338994363176 NA Intergenic Intergenic -66731 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-10 chr14 61789582 61789803 + 3.91338994363176 NA Intergenic Intergenic -107319 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-24 chr7 5077188 5077375 + 3.91338994363176 NA intron (NM_001205231, intron 11 of 11) intron (NM_001205231, intron 11 of 11) -2954 NM_010147 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-6 chr16 34643542 34643776 + 3.91338994363176 NA Intergenic Intergenic -7552 NM_030744 76378 Mm.23515 NM_030744 ENSMUSG00000022832 Ropn1 1700008N21Rik|ODF6|RHPNAP1|Rppn|ropporin ropporin, rhophilin associated protein 1 protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-15 chr17 56031454 56031766 + 3.91338994363176 NA intron (NM_013664, intron 1 of 9) B4|SINE|B4 5027 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-7 chr2 28533553 28533858 + 3.91338994363176 NA exon (NM_001145835, exon 1 of 18) exon (NM_001145835, exon 1 of 18) 241 NM_001145836 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-16 chr17 88537752 88538020 + 3.91338994363176 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 7762 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-21 chr3 144975010 144975197 + 3.91338994363176 NA promoter-TSS (NM_207208) promoter-TSS (NM_207208) -58 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding unique_peak1_14_0_3.63758752477237_1.81879376238619_3.91338994363176-7 chr13 51331215 51331410 + 3.91338994363176 NA Intergenic Intergenic -77306 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-16 chr5 138137283 138137507 + 3.91338994363176 NA Intergenic Intergenic 18349 NM_019747 56314 Mm.19274 NM_019747 ENSMUSG00000037007 Zfp113 4732456B05Rik|mKIAA4229 zinc finger protein 113 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-12 chr16 93000043 93000337 + 3.91338994363176 NA Intergenic Intergenic -174116 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_0_15_-4.24174003748923_1.87912998125539_3.91338994363176 chr3 145503564 145503768 + 3.91338994363176 NA intron (NM_027770, intron 47 of 59) intron (NM_027770, intron 47 of 59) -72542 NM_001081094 229937 Mm.24586 NM_001081094 ENSMUSG00000074182 Znhit6 2410019A14Rik zinc finger, HIT type 6 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-13 chr17 12216645 12216865 + 3.91338994363176 NA exon (NM_026644, exon 8 of 9) exon (NM_026644, exon 8 of 9) 97471 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-8 chr2 152682225 152682434 + 3.91338994363176 NA 3' UTR (NM_001159553, exon 3 of 3) 3' UTR (NM_001159553, exon 3 of 3) -4819 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-26 chr6 13676225 13676589 + 3.91338994363176 NA intron (NM_175312, intron 1 of 4) intron (NM_175312, intron 1 of 4) 1559 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding unique_peak1_13_0_3.53875407336517_1.76937703668258_3.91338994363176-16 chr18 65024212 65024491 + 3.91338994363176 NA intron (NM_031881, intron 1 of 29) intron (NM_031881, intron 1 of 29) 824 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_17_1_2.89876622824595_2.44938311412297_3.91338994363176-11 chr3 88145890 88146081 + 3.91338994363176 NA intron (NM_001310593, intron 1 of 10) intron (NM_001310593, intron 1 of 10) 3613 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding unique_peak2_12_39_-1.889334940859_4.37726062445786_3.91086877283603 chr2 60368800 60369435 + 3.91086877283603 NA intron (NM_013825, intron 2 of 34) intron (NM_013825, intron 2 of 34) 14114 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding unique_peak1_46_11_1.6886988025809_4.42931190201161_3.91086877283603 chr5 35033800 35034458 + 3.91086877283603 NA TTS (NM_001163512) TTS (NM_001163512) -7380 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding unique_peak1_32_5_2.1821034836766_3.67601424255946_3.91086220464714-4 chr2 27096153 27096674 + 3.91086220464714 NA intron (NM_029981, intron 11 of 18) intron (NM_029981, intron 11 of 18) 17032 NM_029981 77794 Mm.330088 NM_029981 ENSMUSG00000036040 Adamtsl2 A930008K15Rik|tcp-1 ADAMTS-like 2 protein-coding unique_peak2_5_27_-2.48236931646586_3.56617026382467_3.91086220464714 chr12 40108228 40108559 + 3.91086220464714 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 25835 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding unique_peak1_32_5_2.1821034836766_3.67601424255946_3.91086220464714-3 chr14 105254936 105255400 + 3.91086220464714 NA Intergenic Intergenic -3505 NM_029561 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding unique_peak1_32_5_2.1821034836766_3.67601424255946_3.91086220464714-5 chr8 77610920 77611222 + 3.91086220464714 NA promoter-TSS (NM_145599) promoter-TSS (NM_145599) -418 NM_145599 234463 Mm.273578 NM_145599 ENSMUSG00000031617 Tmem184c 8430433H16Rik|AI645453|AL033298|BC004056|Tmem34 transmembrane protein 184C protein-coding unique_peak1_32_5_2.1821034836766_3.67601424255946_3.91086220464714-2 chr10 7590068 7590551 + 3.91086220464714 NA exon (NM_001359742, exon 1 of 6) exon (NM_001359742, exon 1 of 6) 509 NM_001359743 237253 Mm.206759 NM_172784 ENSMUSG00000019796 Lrp11 1700034J19Rik|6330533B21|9830160H19Rik low density lipoprotein receptor-related protein 11 protein-coding unique_peak1_32_5_2.1821034836766_3.67601424255946_3.91086220464714 chr1 155138476 155138841 + 3.91086220464714 NA intron (NM_008209, intron 1 of 5) intron (NM_008209, intron 1 of 5) 8156 NM_001355063 15064 Mm.7580 NM_008209 ENSMUSG00000026471 Mr1 H2ls major histocompatibility complex, class I-related protein-coding common_peak2_117_161_-0.747503897135189_6.96609805431703_3.90993059809082 chr7 28371114 28372540 + 3.90993059809082 NA 5' UTR (NM_001290542, exon 1 of 19) 5' UTR (NM_001290542, exon 1 of 19) 835 NM_138752 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak2_290_333_-0.498313115408765_8.13454773476967_3.90938040822349 chr10 71156830 71159673 + 3.90938040822349 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 1439 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_55_15_1.52464411421868_4.76232205710934_3.88696893869767 chr3 94988013 94988432 + 3.88696893869767 NA intron (NM_175356, intron 2 of 10) intron (NM_175356, intron 2 of 10) 13491 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding unique_peak1_44_10_1.75193652878929_4.33539988303194_3.88430425937119-2 chr15 76200746 76201257 + 3.88430425937119 NA promoter-TSS (NM_201390) promoter-TSS (NM_201390) -394 NM_201390 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak1_44_10_1.75193652878929_4.33539988303194_3.88430425937119 chr14 115041470 115042165 + 3.88430425937119 NA Intergenic CpG -1854 NR_029785 723905 NR_029785 ENSMUSG00000065508 Mir17 Mirn17|mir-17|mmu-mir-17 microRNA 17 ncRNA common_peak1_92_34_1.12200212483527_5.6902840793626_3.87325034407395 chr11 94473013 94474347 + 3.87325034407395 NA 5' UTR (NM_001112813, exon 1 of 35) 5' UTR (NM_001112813, exon 1 of 35) 518 NM_001177888 12291 Mm.29585 NM_009783 ENSMUSG00000020866 Cacna1g Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123 calcium channel, voltage-dependent, T type, alpha 1G subunit protein-coding unique_peak1_34_6_2.0440010704882_3.8293554573017_3.87314773301527-2 chr19 10049592 10049944 + 3.87314773301527 NA intron (NM_021890, intron 1 of 11) intron (NM_021890, intron 1 of 11) 8220 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding common_peak1_34_6_2.0440010704882_3.8293554573017_3.87314773301527 chr13 60659604 60659979 + 3.87314773301527 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 57580 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak1_34_6_2.0440010704882_3.8293554573017_3.87314773301527 chr18 38170442 38171078 + 3.87314773301527 NA Intergenic Intergenic 39002 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak2_102_145_-0.792237193821791_6.79370596196912_3.87239390015072 chr17 84086095 84087356 + 3.87239390015072 NA non-coding (NR_045458, exon 4 of 6) non-coding (NR_045458, exon 4 of 6) 8065 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_88_32_1.14391310704147_5.61635067287919_3.87167123306877 chr14 76722748 76723356 + 3.87167123306877 NA Intergenic Intergenic -37079 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_41_9_1.79060660113202_4.21723139545337_3.86499617670048 chr17 87172021 87172583 + 3.86499617670048 NA Intergenic Intergenic 22640 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak1_42_9_1.82431443532207_4.2340853125484_3.86499617670048-2 chr2 131858537 131858905 + 3.86499617670048 NA intron (NM_001166206, intron 1 of 1) intron (NM_001166206, intron 1 of 1) 1026 NM_001166206 71995 Mm.22 NM_028045 ENSMUSG00000037482 Erv3 1600014E20Rik|AA389086|AI426069|AI448024|D19349 endogenous retroviral sequence 3 protein-coding unique_peak1_41_9_1.79060660113202_4.21723139545337_3.86499617670048 chr11 102217995 102218746 + 3.86499617670048 NA intron (NM_001361596, intron 3 of 27) intron (NM_001361596, intron 3 of 27) 11780 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA unique_peak2_10_35_-1.97663963969876_4.18160518159293_3.86499617670048 chr1 12286105 12286589 + 3.86499617670048 NA Intergenic Intergenic -139639 NR_105759 102465961 NR_105759 ENSMUSG00000098555 Mir6341 Gm27262|mmu-mir-6341 microRNA 6341 ncRNA unique_peak1_42_9_1.82431443532207_4.2340853125484_3.86499617670048 chr19 8998268 8998567 + 3.86499617670048 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 9133 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding unique_peak1_41_9_1.79060660113202_4.21723139545337_3.86499617670048-2 chr12 83792251 83792792 + 3.86499617670048 NA TTS (NM_130887) TTS (NM_130887) 28887 NM_130887 170721 Mm.133443 NM_130887 ENSMUSG00000021223 Papln E030033C16Rik papilin, proteoglycan-like sulfated glycoprotein protein-coding unique_peak1_41_9_1.79060660113202_4.21723139545337_3.86499617670048-3 chr3 144089481 144089866 + 3.86499617670048 NA Intergenic Intergenic 112659 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak1_36_7_1.93096074105744_3.96548037052872_3.85629194841873-4 chr3 87073934 87074409 + 3.85629194841873 NA Intergenic Intergenic -74831 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding unique_peak2_7_31_-2.26290497620896_3.86854751189552_3.85629194841873-3 chr5 151650153 151650630 + 3.85629194841873 NA intron (NM_027009, intron 1 of 8) intron (NM_027009, intron 1 of 8) 817 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding unique_peak2_8_31_-2.09417879218081_3.9529106039096_3.85629194841873 chr10 17356281 17356677 + 3.85629194841873 NA Intergenic Intergenic -260697 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_37_7_1.96916345454515_3.98458172727257_3.85629194841873 chr15 53063406 53063971 + 3.85629194841873 NA Intergenic Intergenic 282495 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_37_7_1.96916345454515_3.98458172727257_3.85629194841873-3 chr3 129314078 129314436 + 3.85629194841873 NA intron (NM_007934, intron 3 of 19) intron (NM_007934, intron 3 of 19) 18492 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding unique_peak2_7_31_-2.26290497620896_3.86854751189552_3.85629194841873-2 chr4 139213320 139213791 + 3.85629194841873 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 19444 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_37_7_1.96916345454515_3.98458172727257_3.85629194841873-4 chr5 136475735 136476517 + 3.85629194841873 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 89855 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_7_31_-2.26290497620896_3.86854751189552_3.85629194841873 chr10 79101031 79101521 + 3.85629194841873 NA Intergenic Intergenic -3676 NM_001004362 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding unique_peak1_36_7_1.93096074105744_3.96548037052872_3.85629194841873-3 chr3 65870215 65870700 + 3.85629194841873 NA Intergenic Intergenic 87792 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak2_8_31_-2.09417879218081_3.9529106039096_3.85629194841873-2 chr4 144893886 144894513 + 3.85629194841873 NA intron (NM_001357274, intron 2 of 6) intron (NM_001357274, intron 2 of 6) 1062 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak1_36_7_1.93096074105744_3.96548037052872_3.85629194841873 chr11 118429860 118430373 + 3.85629194841873 NA intron (NM_001204129, intron 1 of 3) intron (NM_001204129, intron 1 of 3) 1659 NM_001204129 56745 Mm.23845 NM_019959 ENSMUSG00000017446 C1qtnf1 1600017K21Rik|CTRP1|Zsig37 C1q and tumor necrosis factor related protein 1 protein-coding unique_peak1_37_7_1.96916345454515_3.98458172727257_3.85629194841873-2 chr2 70061169 70061655 + 3.85629194841873 NA intron (NM_177376, intron 2 of 34) intron (NM_177376, intron 2 of 34) 22286 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak1_36_7_1.93096074105744_3.96548037052872_3.85629194841873-2 chr14 70095356 70096015 + 3.85629194841873 NA Intergenic Intergenic -4408 NM_021328 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak1_39_8_1.87271696195612_4.10628348242037_3.85480160428389 chr7 82502870 82503531 + 3.85480160428389 NA intron (NM_001190374, intron 9 of 29) intron (NM_001190374, intron 9 of 29) 145328 NM_177894 330577 Mm.222812 NM_177894 ENSMUSG00000038570 Saxo2 1700129I04Rik|D030069K18|Fam154b stabilizer of axonemal microtubules 2 protein-coding unique_peak1_71_23_1.2996937683783_5.23480938491031_3.85276265993682 chr9 64462090 64462816 + 3.85276265993682 NA intron (NM_001134399, intron 1 of 24) intron (NM_001134399, intron 1 of 24) 76827 NM_001134399 214058 Mm.127721 NM_172522 ENSMUSG00000036466 Megf11 2410080H04Rik|D130061K05 multiple EGF-like-domains 11 protein-coding common_peak2_133_177_-0.701235392899254_7.12511573451677_3.84567970222405 chr9 71321847 71322957 + 3.84567970222405 NA Intergenic Intergenic 106613 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak1_125_53_0.931427816510123_6.22060141041853_3.84312720942358 chr7 139271467 139273159 + 3.84312720942358 NA Intergenic Intergenic 23831 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_26_3_2.4796018304734_3.2398009152367_3.8429424127101-5 chr6 40595523 40596090 + 3.8429424127101 NA Intergenic Intergenic -10001 NM_001038604 23845 Mm.103765 NM_021364 ENSMUSG00000029915 Clec5a Clecsf5|Ly100|MDL-1|Mdl1 C-type lectin domain family 5, member a protein-coding unique_peak1_26_3_2.4796018304734_3.2398009152367_3.8429424127101 chr1 131688868 131689305 + 3.8429424127101 NA intron (NM_145509, intron 1 of 5) intron (NM_145509, intron 1 of 5) 391 NM_145509 226421 Mm.44508 NM_145509 ENSMUSG00000052688 Rab7b 5430435G22Rik RAB7B, member RAS oncogene family protein-coding unique_peak1_26_3_2.4796018304734_3.2398009152367_3.8429424127101-2 chr13 67332172 67332479 + 3.8429424127101 NA intron (NM_177622, intron 1 of 4) intron (NM_177622, intron 1 of 4) 235 NM_177622 218314 Mm.289695 NM_177622 ENSMUSG00000057842 Zfp595 A230042K10Rik|Rslcan23 zinc finger protein 595 protein-coding unique_peak1_26_3_2.4796018304734_3.2398009152367_3.8429424127101-6 chr9 123473491 123474003 + 3.8429424127101 NA Intergenic Intergenic -4954 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding unique_peak1_26_3_2.4796018304734_3.2398009152367_3.8429424127101-3 chr14 69471690 69472217 + 3.8429424127101 NA Intergenic Intergenic 40596 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak1_26_3_2.4796018304734_3.2398009152367_3.8429424127101-4 chr3 98025969 98026304 + 3.8429424127101 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 12598 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak2_3_22_-2.77941195269273_3.13385597971065_3.8429424127101 chr9 18637393 18637812 + 3.8429424127101 NA Intergenic Intergenic 118031 NM_146606 18322 Mm.246530 NM_146606 ENSMUSG00000054141 Olfr24 MOR132-1|MTPCR51 olfactory receptor 24 protein-coding unique_peak1_53_14_1.56565625529164_4.68971872325434_3.8396563824121 chr14 121709975 121710765 + 3.8396563824121 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -11953 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak1_53_14_1.56565625529164_4.68971872325434_3.8396563824121-2 chr16 34861649 34862240 + 3.8396563824121 NA intron (NM_139300, intron 3 of 31) intron (NM_139300, intron 3 of 31) 76994 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak1_305_167_0.565074679866112_7.67485476271182_3.83397075963999 chrUn_JH584304 58784 59272 + 3.83397075963999 NA intron (NR_003518, intron 1 of 6) intron (NR_003518, intron 1 of 6) 661 NR_003518 66776 Mm.247625 NR_003518 Pisd-ps3 4933439C20Rik phosphatidylserine decarboxylase, pseudogene 3 pseudo common_peak1_144_64_0.865147127529448_6.45494137679318_3.83309179031657 chr3 57505127 57506925 + 3.83309179031657 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 69850 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_96_138_-0.80733051831243_6.71527581356729_3.82863094493248 chr15 98984840 98986472 + 3.82863094493248 NA promoter-TSS (NR_045991) promoter-TSS (NR_045991) -309 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak1_81_122_-0.871554937738802_6.50673703646984_3.8273293106879 chr7 89980682 89981212 + 3.8273293106879 NA promoter-TSS (NM_021876) promoter-TSS (NM_021876) 29 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding common_peak1_254_133_0.630124208713524_7.38115129481453_3.82652648525514 chr11 59662476 59664321 + 3.82652648525514 NA intron (NM_201245, intron 1 of 22) intron (NM_201245, intron 1 of 22) 903 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak1_163_76_0.797118047332293_6.66534556436105_3.82515318520136 chr14 105176235 105177723 + 3.82515318520136 NA 5' UTR (NM_134077, exon 1 of 21) 5' UTR (NM_134077, exon 1 of 21) 348 NM_134077 74213 Mm.474531 NM_134077 ENSMUSG00000022119 Rbm26 1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2 RNA binding motif protein 26 protein-coding unique_peak1_65_20_1.36769358204575_5.07616421380164_3.82396535842625 chr14 66833663 66834497 + 3.82396535842625 NA intron (NM_009955, intron 4 of 13) intron (NM_009955, intron 4 of 13) 34520 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_78_27_1.21021274421767_5.41246129416644_3.81349929503742 chr2 24464923 24465947 + 3.81349929503742 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 10164 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_93_35_1.0966813222865_5.71826566258556_3.80613836151032 chr19 44554588 44555350 + 3.80613836151032 NA exon (NM_001347447, exon 2 of 5) exon (NM_001347447, exon 2 of 5) 473 NM_001347447 67264 Mm.2060 NM_026061 ENSMUSG00000025204 Ndufb8 2900010I05Rik|AI987932|CI-ASHI NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein-coding common_peak1_213_107_0.690223555292447_7.09999927980969_3.80361629740503 chr3 159839533 159841237 + 3.80361629740503 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 735 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak2_52_90_-1.06202458492884_5.97678234773428_3.80075004868472 chr16 35422785 35424126 + 3.80075004868472 NA intron (NM_028295, intron 10 of 16) intron (NM_028295, intron 10 of 16) -59537 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak2_37_71_-1.20076154689716_5.56954422799373_3.8004273015913 chr7 67617179 67618271 + 3.8004273015913 NA intron (NM_027413, intron 5 of 5) intron (NM_027413, intron 5 of 5) 27511 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_86_31_1.15574862360472_5.57787431180236_3.80042730159129 chr17 86166634 86167398 + 3.80042730159129 NA promoter-TSS (NM_011104) promoter-TSS (NM_011104) -769 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding common_peak1_86_31_1.15574862360472_5.57787431180236_3.80042730159129-2 chr3 21961377 21962429 + 3.80042730159129 NA Intergenic Intergenic -114749 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_405_234_0.48594516523991_8.11948952918495_3.79865231269246 chr3 96160523 96163346 + 3.79865231269246 NA promoter-TSS (NM_181409) promoter-TSS (NM_181409) -36 NM_181409 194126 Mm.268536 NM_181409 ENSMUSG00000045934 Mtmr11 AI035306|BC051083|Cra myotubularin related protein 11 protein-coding common_peak2_219_111_0.677367420146847_7.14603863213103_3.79585253824117 chr3 159839415 159841242 + 3.79585253824117 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 678 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak1_50_13_1.5833115375063_4.59901069081076_3.79546561170023 chr19 32197736 32198326 + 3.79546561170023 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 12982 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak2_15_42_-1.6962247104843_4.57815239945995_3.79546561170022 chr18 44473493 44474018 + 3.79546561170022 NA exon (NM_001085374, exon 9 of 17) exon (NM_001085374, exon 9 of 17) 93255 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding unique_peak2_15_42_-1.6962247104843_4.57815239945995_3.79546561170022-2 chr9 44135193 44135804 + 3.79546561170022 NA intron (NM_001359530, intron 1 of 14) intron (NM_001359530, intron 1 of 14) 840 NM_001359530 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding unique_peak2_15_42_-1.6962247104843_4.57815239945995_3.79546561170022-3 chr9 73113484 73113813 + 3.79546561170022 NA intron (NM_198609, intron 1 of 5) CpG 179 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding unique_peak1_118_49_0.960578737562614_6.12414555855603_3.79235856330035 chr17 4908140 4909131 + 3.79235856330035 NA Intergenic CpG -86439 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_174_219_-0.624456781371466_7.46913132283893_3.79170040050895 chr17 79712468 79715078 + 3.79170040050895 NA exon (NM_009994, exon 2 of 3) exon (NM_009994, exon 2 of 3) 1268 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak1_69_22_1.32073905691555_5.18393148451479_3.78802519259418 chr11 57801696 57802516 + 3.78802519259418 NA promoter-TSS (NR_131042) promoter-TSS (NR_131042) 469 NM_001081168 50724 Mm.340083 NM_001081168 ENSMUSG00000020519 Sap30l 2310079P12Rik|AF006998|L55 SAP30-like protein-coding unique_peak1_69_22_1.32073905691555_5.18393148451479_3.78802519259418 chr10 16636950 16638491 + 3.78802519259418 NA Intergenic Intergenic 458062 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_68_22_1.3001269479667_5.17362543004036_3.78802519259418 chr19 36554778 36555217 + 3.78802519259418 NA intron (NM_001163471, intron 1 of 20) CpG 358 NM_172637 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain E3 ubiquitin protein ligase 2 protein-coding common_peak2_169_214_-0.632815052645618_7.43178532326665_3.78775219519395 chr8 83165197 83166978 + 3.78775219519395 NA exon (NM_027758, exon 1 of 18) exon (NM_027758, exon 1 of 18) 735 NM_027758 71310 Mm.24031 NM_027758 ENSMUSG00000031709 Tbc1d9 4933431N12Rik|AI847101|AW490653|C76116 TBC1 domain family, member 9 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-5 chr12 51953537 51953827 + 3.78760380288747 NA intron (NM_177171, intron 6 of 35) intron (NM_177171, intron 6 of 35) 17639 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-8 chr18 84879959 84880227 + 3.78760380288747 NA TTS (NM_025797) TTS (NM_025797) 28755 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-21 chr9 59189003 59189269 + 3.78760380288747 NA Intergenic Intergenic -102436 NM_001359282 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-14 chr3 94988679 94988936 + 3.78760380288747 NA intron (NM_175356, intron 2 of 10) intron (NM_175356, intron 2 of 10) 14076 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747 chr1 181016883 181017085 + 3.78760380288747 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 585 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-19 chr6 50413536 50413842 + 3.78760380288747 NA intron (NM_001163645, intron 2 of 21) (A)n|Simple_repeat|Simple_repeat -30852 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-7 chr17 87610168 87610726 + 3.78760380288747 NA Intergenic B3|SINE|B2 -25532 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-17 chr6 55435399 55435807 + 3.78760380288747 NA Intergenic Intergenic -16375 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-23 chr9 23391153 23391370 + 3.78760380288747 NA intron (NM_028472, intron 11 of 14) intron (NM_028472, intron 11 of 14) 168185 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-16 chr5 64241919 64242287 + 3.78760380288747 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 11746 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-26 chrX 96113066 96113490 + 3.78760380288747 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 17233 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-22 chr8 121637070 121637317 + 3.78760380288747 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 14740 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-16 chr4 125117544 125117772 + 3.78760380288747 NA TTS (NM_153159) TTS (NM_153159) 10223 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak2_1_17_-3.41872001850478_2.46056499218992_3.78760380288747 chr1 151171766 151172151 + 3.78760380288747 NA Intergenic Intergenic 33924 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-7 chr18 65794530 65794737 + 3.78760380288747 NA Intergenic Intergenic -5945 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-12 chr3 21960108 21960356 + 3.78760380288747 NA Intergenic Intergenic -116420 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-21 chr8 104390224 104390601 + 3.78760380288747 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 5395 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-6 chr17 14383733 14384041 + 3.78760380288747 NA intron (NM_022315, intron 9 of 12) intron (NM_022315, intron 9 of 12) 15055 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-4 chr11 51831650 51831923 + 3.78760380288747 NA intron (NM_001357588, intron 5 of 12) intron (NM_001357588, intron 5 of 12) 25695 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-15 chr4 46648894 46649253 + 3.78760380288747 NA intron (NM_198664, intron 1 of 12) intron (NM_198664, intron 1 of 12) 1126 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-20 chr8 70554281 70554548 + 3.78760380288747 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 14739 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-14 chr4 126120639 126120897 + 3.78760380288747 NA intron (NM_001145827, intron 3 of 12) intron (NM_001145827, intron 3 of 12) 16811 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-18 chr6 35385552 35385813 + 3.78760380288747 NA Intergenic Intergenic 54836 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-24 chr9 49827325 49827563 + 3.78760380288747 NA Intergenic Intergenic -28051 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-20 chr6 136957425 136957619 + 3.78760380288747 NA intron (NM_023898, intron 1 of 3) intron (NM_023898, intron 1 of 3) 2999 NM_023898 78600 Mm.290622 NM_023898 ENSMUSG00000064330 Pde6h A930033D18Rik|PDEgamma phosphodiesterase 6H, cGMP-specific, cone, gamma protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-3 chr12 102302273 102302585 + 3.78760380288747 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 18788 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_1_17_-3.41872001850478_2.46056499218992_3.78760380288747-2 chr16 48992562 48992772 + 3.78760380288747 NA intron (NM_027341, intron 1 of 30) intron (NM_027341, intron 1 of 30) 1445 NM_027341 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-15 chr4 133616571 133616941 + 3.78760380288747 NA intron (NM_001017968, intron 2 of 7) intron (NM_001017968, intron 2 of 7) -14588 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-22 chr9 120027609 120027943 + 3.78760380288747 NA Intergenic Intergenic -4178 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-12 chr2 152814531 152814742 + 3.78760380288747 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 13853 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-3 chr11 3369645 3370036 + 3.78760380288747 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) 1564 NM_001361623 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-18 chr7 55794803 55795143 + 3.78760380288747 NA intron (NM_001360873, intron 1 of 21) intron (NM_001360873, intron 1 of 21) 848 NM_001360873 233276 Mm.284306 NM_146190 ENSMUSG00000033790 Tubgcp5 B130010C12Rik|GCP5|mKIAA1899 tubulin, gamma complex associated protein 5 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-4 chr14 22967130 22967464 + 3.78760380288747 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 127274 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-10 chr2 148379037 148379236 + 3.78760380288747 NA Intergenic Intergenic -16241 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-2 chr10 96821486 96821695 + 3.78760380288747 NA Intergenic Intergenic 204589 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-8 chr2 117886632 117886914 + 3.78760380288747 NA intron (NR_040631, intron 3 of 5) intron (NR_040631, intron 3 of 5) 64845 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-9 chr2 33847027 33847241 + 3.78760380288747 NA intron (NM_175184, intron 2 of 9) intron (NM_175184, intron 2 of 9) 40812 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-2 chr10 21466014 21466266 + 3.78760380288747 NA Intergenic Intergenic 88840 NM_178713 237320 Mm.90181 NM_178713 ENSMUSG00000037542 Aldh8a1 Raldh4 aldehyde dehydrogenase 8 family, member A1 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-13 chr3 101805516 101805714 + 3.78760380288747 NA Intergenic Intergenic 30608 NM_172295 242125 Mm.32900 NM_172295 ENSMUSG00000044313 Mab21l3 - mab-21-like 3 (C. elegans) protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-23 chrX 73544762 73545054 + 3.78760380288747 NA intron (NM_177236, intron 12 of 20) intron (NM_177236, intron 12 of 20) 41822 NM_177236 320707 Mm.210095 NM_177236 ENSMUSG00000031376 Atp2b3 6430519O13Rik|Pmca3 ATPase, Ca++ transporting, plasma membrane 3 protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-5 chr14 66834749 66834954 + 3.78760380288747 NA intron (NM_009955, intron 3 of 13) intron (NM_009955, intron 3 of 13) 33749 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747 chr1 55049101 55049350 + 3.78760380288747 NA Intergenic Intergenic -3545 NM_026424 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-11 chr2 120732048 120732269 + 3.78760380288747 NA promoter-TSS (NM_026891) promoter-TSS (NM_026891) -641 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-17 chr5 137035898 137036153 + 3.78760380288747 NA intron (NM_007457, intron 4 of 4) intron (NM_007457, intron 4 of 4) 5730 NM_001039385 381677 Mm.389697 NM_001039385 ENSMUSG00000037428 Vgf Gm1052 VGF nerve growth factor inducible protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-25 chr9 103071172 103071409 + 3.78760380288747 NA intron (NM_033314, intron 6 of 13) intron (NM_033314, intron 6 of 13) -40784 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-6 chr14 73877693 73877964 + 3.78760380288747 NA Intergenic Intergenic 325042 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-10 chr2 75660997 75661220 + 3.78760380288747 NA intron (NM_146130, intron 1 of 10) intron (NM_146130, intron 1 of 10) 1818 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-9 chr2 129633779 129634219 + 3.78760380288747 NA Intergenic LTR37B|LTR|ERV1 38537 NM_001355160 19261 Mm.1682 NM_007547 ENSMUSG00000037902 Sirpa AI835480|Bit|CD172a|P84|Ptpns1|SHP-1|SHPS-1|SIRP signal-regulatory protein alpha protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-13 chr3 53204324 53204567 + 3.78760380288747 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 162898 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_20_2_2.53462717487147_2.85227608815689_3.78760380288747-19 chr7 63914087 63914344 + 3.78760380288747 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) -2642 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_19_2_2.46473444225052_2.81732972184642_3.78760380288747-11 chr2 164747362 164747721 + 3.78760380288747 NA exon (NM_133763, exon 3 of 13) exon (NM_133763, exon 3 of 13) 1526 NM_133763 76233 Mm.440009 NM_133763 ENSMUSG00000017299 Dnttip1 6430706C13Rik deoxynucleotidyltransferase, terminal, interacting protein 1 protein-coding unique_peak1_105_42_1.01245032099452_5.93248991519936_3.78247198224606 chr3 21964941 21966448 + 3.78247198224606 NA Intergenic Intergenic -110958 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_69_108_-0.923883311804367_6.30624266887474_3.78076085084899 chr2 84715415 84716739 + 3.78076085084899 NA promoter-TSS (NM_144887) promoter-TSS (NM_144887) -913 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak1_131_175_-0.706475593386028_7.10619382194428_3.7783816278887 chr11 78369113 78370427 + 3.7783816278887 NA intron (NM_008238, intron 3 of 8) intron (NM_008238, intron 3 of 8) 16838 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak1_48_84_-1.07603279277165_5.87137453975188_3.76632018019701 chr18 38601602 38602467 + 3.76632018019701 NA promoter-TSS (NM_011898) promoter-TSS (NM_011898) -766 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak1_102_40_1.04003536044014_5.87756968483816_3.76632018019701 chr1 156616943 156618151 + 3.76632018019701 NA intron (NM_001136104, intron 1 of 12) intron (NM_001136104, intron 1 of 12) 56792 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding unique_peak2_22_52_-1.4780121731937_4.98891436796635_3.7633092158656 chr2 70436418 70437056 + 3.7633092158656 NA Intergenic Intergenic -38186 NM_022435 64406 Mm.423397 NM_022435 ENSMUSG00000075304 Sp5 - trans-acting transcription factor 5 protein-coding common_peak1_62_19_1.37144220335947_5.0076491965671_3.7633092158656 chr3 137150643 137151063 + 3.7633092158656 NA Intergenic Intergenic -190225 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_56_16_1.46253621552226_4.81873094901147_3.76198415239266 chr4 19708255 19708989 + 3.76198415239266 NA intron (NR_074090, intron 1 of 24) CpG 382 NM_177327 107568 Mm.78312 NM_177327 ENSMUSG00000041058 Wwp1 8030445B08Rik|AIP5|SDRP1|Tiul1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding unique_peak1_48_12_1.63291842522496_4.51689893075357_3.75499050687144 chr1 71922402 71922902 + 3.75499050687144 NA Intergenic Intergenic 34540 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_47_12_1.60338094873091_4.50213019250655_3.75499050687144 chr3 84404935 84405957 + 3.75499050687144 NA Intergenic Intergenic -25525 NR_040752 75309 Mm.159497 NR_040752 ENSMUSG00000104004 4930565D16Rik - RIKEN cDNA 4930565D16 gene ncRNA unique_peak2_13_40_-1.81879793125291_4.44815303899163_3.75499050687143 chr7 45127529 45127842 + 3.75499050687143 NA promoter-TSS (NR_001277) promoter-TSS (NR_001277) -222 NR_000002 27209 NR_000002 ENSMUSG00000065219 Snord32a Rnu32|Rnu32a|U32|U32A small nucleolar RNA, C/D box 32A snoRNA unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-12 chr6 32963911 32964209 + 3.75443312462699 NA intron (NM_001355667, intron 4 of 8) intron (NM_001355667, intron 4 of 8) 96200 NM_001355667 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-6 chr15 78857063 78857332 + 3.75443312462699 NA Intergenic Intergenic -1668 NM_025622 107753 Mm.390793 NM_025622 ENSMUSG00000043501 Lgals2 2200008F12Rik|AI324147 lectin, galactose-binding, soluble 2 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-7 chr19 10496165 10496491 + 3.75443312462699 NA Intergenic Intergenic -13431 NM_133689 67752 Mm.25939 NM_133689 ENSMUSG00000035179 Ppp1r32 4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S protein phosphatase 1, regulatory subunit 32 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-2 chr11 76121534 76121724 + 3.75443312462699 NA intron (NM_026664, intron 7 of 21) intron (NM_026664, intron 7 of 21) 58001 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-14 chr6 92615049 92615401 + 3.75443312462699 NA intron (NM_001081146, intron 2 of 8) intron (NM_001081146, intron 2 of 8) -47859 NM_001134461 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-4 chr13 38423826 38424259 + 3.75443312462699 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 37751 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-11 chr5 136108609 136108871 + 3.75443312462699 NA intron (NM_001039103, intron 18 of 19) intron (NM_001039103, intron 18 of 19) 3218 NR_106002 102465626 NR_106002 ENSMUSG00000099003 Mir7035 Gm27661|mmu-mir-7035 microRNA 7035 ncRNA unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-9 chr3 63562189 63562402 + 3.75443312462699 NA Intergenic Intergenic 123044 NR_153189 102637430 Mm.209619 NR_153189 ENSMUSG00000104336 Gm34240 - predicted gene, 34240 ncRNA unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-5 chr14 63148993 63149313 + 3.75443312462699 NA intron (NM_001360211, intron 7 of 7) intron (NM_001360211, intron 7 of 7) 26691 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699 chr11 5861475 5861814 + 3.75443312462699 NA promoter-TSS (NM_001291857) promoter-TSS (NM_001291857) -222 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-13 chr6 90380524 90380759 + 3.75443312462699 NA intron (NM_173002, intron 5 of 9) intron (NM_173002, intron 5 of 9) 11147 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-3 chr12 80214087 80214386 + 3.75443312462699 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 46135 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-10 chr5 5682610 5683027 + 3.75443312462699 NA exon (NM_001103156, exon 3 of 6) exon (NM_001103156, exon 3 of 6) 11271 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-8 chr2 31900391 31900646 + 3.75443312462699 NA exon (NM_011836, exon 3 of 28) exon (NM_011836, exon 3 of 28) 13237 NM_011836 23928 Mm.69566 NM_011836 ENSMUSG00000026840 Lamc3 1110064A23Rik|AI562206|AW240805 laminin gamma 3 protein-coding unique_peak1_22_2_2.66494578064834_2.91743539104533_3.75443312462699-15 chr8 34760317 34760576 + 3.75443312462699 NA Intergenic Intergenic -47164 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_246_289_-0.529357464378958_7.91523035782546_3.75153275520379 chr19 10688270 10690366 + 3.75153275520379 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) 583 NM_001361959 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_127_55_0.90152018344046_6.25811501377783_3.75145640147997 chr15 31343579 31344846 + 3.75145640147997 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 23547 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak2_66_105_-0.946367436922811_6.25473673610179_3.75145640147994 chr15 99846263 99847301 + 3.75145640147994 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) -26633 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_193_95_0.719593074116678_6.94475903777949_3.74368928240858 chr19 4208133 4209673 + 3.74368928240858 NA Intergenic Intergenic -5335 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak2_228_117_0.659515278650352_7.21240068868702_3.74315569448527 chr18 61045229 61046989 + 3.74315569448527 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 959 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_28_4_2.26003990606315_3.45194804791894_3.74275476306371-3 chr3 52766880 52767284 + 3.74275476306371 NA intron (NR_038079, intron 1 of 3) intron (NR_038079, intron 1 of 3) 27358 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak1_28_4_2.26003990606315_3.45194804791894_3.74275476306371-6 chr9 75750304 75750701 + 3.74275476306371 NA Intergenic Intergenic -24863 NM_007555 12160 Mm.428950 NM_007555 ENSMUSG00000032179 Bmp5 AU023399|se bone morphogenetic protein 5 protein-coding unique_peak1_28_4_2.26003990606315_3.45194804791894_3.74275476306371-4 chr6 65854672 65855206 + 3.74275476306371 NA intron (NM_029549, intron 3 of 10) intron (NM_029549, intron 3 of 10) 75977 NM_029549 70779 Mm.263355 NM_027547 ENSMUSG00000029913 Prdm5 4432417F03Rik|6530401I24Rik|AI197291|E130112L17Rik|PFM2 PR domain containing 5 protein-coding unique_peak2_4_24_-2.58004928765656_3.35383154594644_3.74275476306371 chr8 36824939 36825377 + 3.74275476306371 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -92104 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_28_4_2.26003990606315_3.45194804791894_3.74275476306371-2 chr2 122327507 122328080 + 3.74275476306371 NA intron (NM_001099297, intron 14 of 32) intron (NM_001099297, intron 14 of 32) 12121 NM_001099297 99439 Mm.108582 NM_001099297 ENSMUSG00000033268 Duox1 9930101G15Rik|AW987690|Duox2|LNOX1|LNOX2|NOXEF1|NOXEF2|P138-TOX|THOX1|THOX2 dual oxidase 1 protein-coding unique_peak1_28_4_2.26003990606315_3.45194804791894_3.74275476306371-5 chr7 68023628 68024008 + 3.74275476306371 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 71561 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_28_4_2.26003990606315_3.45194804791894_3.74275476306371 chr14 20388437 20388761 + 3.74275476306371 NA intron (NM_134081, intron 1 of 4) CpG 311 NM_134081 108671 Mm.2871 NM_134081 ENSMUSG00000021811 Dnajc9 5330419I01Rik|AU020082 DnaJ heat shock protein family (Hsp40) member C9 protein-coding common_peak1_94_36_1.07231200809683_5.74560936967737_3.74156548647979 chr5 76304423 76305395 + 3.74156548647979 NA promoter-TSS (NM_001289826) promoter-TSS (NM_001289826) 33 NR_152171 665055 Mm.425276 NR_152171 ENSMUSG00000098449 Gm7467 EG665055 predicted gene 7467 ncRNA common_peak1_157_201_-0.647698796049762_7.33436208472691_3.73980857519636 chr2 117665980 117667649 + 3.73980857519636 NA Intergenic Intergenic 145988 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_177_85_0.754987492124585_6.80375850076439_3.73949572411947 chr14 105895582 105897114 + 3.73949572411947 NA intron (NM_011897, intron 1 of 1) CpG 471 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding common_peak2_133_58_0.891854988705302_6.32857054371449_3.73770049208073 chr13 28531814 28532736 + 3.73770049208073 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 178598 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak2_314_354_-0.472757976537819_8.23529622612314_3.73471387108684 chr15 80023827 80025711 + 3.73471387108684 NA Intergenic Intergenic -9961 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_79_28_1.17760598869761_5.44678398947638_3.73415597305199 chr4 124700760 124701790 + 3.73415597305199 NA intron (NM_010213, intron 1 of 5) Arthur1B|DNA|hAT-Tip100 576 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding unique_peak1_90_34_1.09085922751103_5.67471263070048_3.73368918132414 chr19 59469022 59469993 + 3.73368918132414 NA Intergenic Intergenic 10817 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak2_172_82_0.765397608519931_6.75773823560689_3.73136534886529 chr3 38936744 38937984 + 3.73136534886529 NA intron (NM_183221, intron 1 of 16) intron (NM_183221, intron 1 of 16) 50424 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_87_32_1.12772630366536_5.60825727119113_3.7294213069332 chr4 100776652 100778073 + 3.7294213069332 NA exon (NM_198037, exon 1 of 27) exon (NM_198037, exon 1 of 27) 683 NM_198037 320508 Mm.151962 NM_198037 ENSMUSG00000028532 Cachd1 1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573 cache domain containing 1 protein-coding common_peak2_83_30_1.15128340605926_5.52983801341651_3.72934020370118 chr14 60250982 60251323 + 3.72934020370118 NA intron (NM_001362440, intron 1 of 14) CpG 327 NM_001362440 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak2_35_69_-1.23757176827226_5.51049713280884_3.72934020370117 chr5 109556148 109557336 + 3.72934020370117 NA intron (NM_001310694, intron 3 of 7) CpG-11313 2251 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding unique_peak1_66_21_1.32212139900309_5.12049231813884_3.72402976438215 chr3 89288904 89289575 + 3.72402976438215 NA Intergenic Intergenic -8288 NM_001162425 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak2_24_55_-1.43800108033205_5.08835438189158_3.72402976438215 chr9 119339673 119340354 + 3.72402976438215 NA promoter-TSS (NM_010851) promoter-TSS (NM_010851) 27 NM_010851 17874 Mm.213003 NM_010851 ENSMUSG00000032508 Myd88 - myeloid differentiation primary response gene 88 protein-coding common_peak1_64_102_-0.948360433547471_6.21232031040948_3.72310471574323 chr10 19046309 19047485 + 3.72310471574323 NA Intergenic Intergenic -31487 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_144_187_-0.667073911119735_7.22105189611777_3.72018495685668 chr1 6358035 6360591 + 3.72018495685668 NA promoter-TSS (NM_001195732) promoter-TSS (NM_001195732) -18 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak1_162_76_0.788356449029523_6.66096476520966_3.71982655418832 chr11 72488134 72489868 + 3.71982655418832 NA intron (NM_153060, intron 1 of 12) CpG 919 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak2_12_38_-1.85280906483389_4.3589976864453_3.71898806998115 chr13 119708974 119709739 + 3.71898806998115 NA TTS (NM_175538) TTS (NM_175538) 19005 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding common_peak2_147_67_0.829387940660615_6.50215681158065_3.71703510816645 chr11 98937670 98938775 + 3.71703510816645 NA intron (NM_009024, intron 1 of 8) intron (NM_009024, intron 1 of 8) 504 NM_001177302 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_54_15_1.49883230135094_4.74941615067547_3.70968671820992 chr3 9002550 9003134 + 3.70968671820992 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 1362 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_54_15_1.49883230135094_4.74941615067547_3.70968671820992-3 chr7 31042305 31042879 + 3.70968671820992 NA promoter-TSS (NM_001111073) promoter-TSS (NM_001111073) -261 NM_001287217 18301 Mm.1870 NM_008761 ENSMUSG00000009687 Fxyd5 EF-8|Oit2|RIC FXYD domain-containing ion transport regulator 5 protein-coding common_peak1_54_15_1.49883230135094_4.74941615067547_3.70968671820992-2 chr7 3694851 3695369 + 3.70968671820992 NA exon (NM_001164205, exon 3 of 5) exon (NM_001164205, exon 3 of 5) 602 NM_024168 66078 Mm.379100 NM_024168 ENSMUSG00000035585 Tsen34 0610027F08Rik|Leng5 tRNA splicing endonuclease subunit 34 protein-coding unique_peak2_17_45_-1.62479572781106_4.71116409215148_3.70968671820991 chr4 89295437 89295963 + 3.70968671820991 NA intron (NR_132431, intron 1 of 9) intron (NR_132431, intron 1 of 9) 520 NR_132431 102633081 Mm.409388 NR_132431 Gm12610 ANRIL|Gm12609 predicted gene 12610 ncRNA common_peak1_103_41_1.01911079252986_5.90187281904369_3.70886757573671 chr14 45478599 45479493 + 3.70886757573671 NA intron (NM_001360525, intron 4 of 15) intron (NM_001360525, intron 4 of 15) 51019 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_67_106_-0.938691108637939_6.27212143208218_3.70740816773561 chr15 88854794 88855301 + 3.70740816773561 NA Intergenic Intergenic -7147 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak1_60_18_1.39922855585929_4.94754179137323_3.70386894545106 chr10 21796910 21797530 + 3.70386894545106 NA Intergenic Intergenic -84964 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_60_18_1.39922855585929_4.94754179137323_3.70386894545106 chr14 76479268 76479629 + 3.70386894545106 NA intron (NM_207652, intron 1 of 2) intron (NM_207652, intron 1 of 2) -8988 NM_001177751 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_113_155_-0.742458141662892_6.9141731480308_3.70277950734084 chr7 28371156 28372474 + 3.70277950734084 NA 5' UTR (NM_001290542, exon 1 of 19) 5' UTR (NM_001290542, exon 1 of 19) 847 NM_138752 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak2_460_489_-0.392181890158529_8.74054699392331_3.7010494932043 chr13 55509674 55513438 + 3.7010494932043 NA intron (NM_001114088, intron 2 of 12) intron (NM_001114088, intron 2 of 12) 1890 NM_026131 67399 Mm.275648 NM_026131 ENSMUSG00000021493 Pdlim7 LMP PDZ and LIM domain 7 protein-coding common_peak2_224_115_0.658934091906402_7.18744804108077_3.70032307014021 chr3 157946894 157948167 + 3.70032307014021 NA exon (NM_001013806, exon 1 of 13) exon (NM_001013806, exon 1 of 13) 530 NM_001013806 433667 Mm.265806 NM_001013806 ENSMUSG00000039988 Ankrd13c AI505652|AU022220 ankyrin repeat domain 13c protein-coding unique_peak1_111_46_0.963000282967799_6.03608899316154_3.69519584706626 chr5 114372937 114374621 + 3.69519584706626 NA intron (NM_001159941, intron 2 of 6) intron (NM_001159941, intron 2 of 6) 6726 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak2_46_82_-1.10137812804487_5.82435036732449_3.69288523221345 chr9 63706696 63707361 + 3.69288523221345 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 50966 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_109_151_-0.756150191665891_6.86985241761064_3.69049658094796 chr16 23519163 23521226 + 3.69049658094796 NA intron (NM_001359083, intron 1 of 10) intron (NM_001359083, intron 1 of 10) 621 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding unique_peak2_11_36_-1.89152273961046_4.26369199582372_3.68843956647705 chr11 72041784 72042248 + 3.68843956647705 NA promoter-TSS (NM_144526) promoter-TSS (NM_144526) -486 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding unique_peak1_43_10_1.71974378395976_4.31930351061718_3.68843956647704 chr10 120638675 120639010 + 3.68843956647704 NA Intergenic Intergenic -126890 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_43_10_1.71974378395976_4.31930351061718_3.68843956647704-2 chr8 85068208 85068771 + 3.68843956647704 NA promoter-TSS (NM_001195531) promoter-TSS (NM_001195531) -507 NM_001195531 100503710 Mm.440240 NM_001195531 ENSMUSG00000095845 Gm5741 EG436049 predicted gene 5741 protein-coding unique_peak2_5_26_-2.42990189657173_3.5399365538776_3.68490442130631 chr1 89109860 89110210 + 3.68490442130631 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 39620 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631-3 chr11 4104952 4105305 + 3.68490442130631 NA intron (NM_144520, intron 8 of 11) intron (NM_144520, intron 8 of 11) -9697 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding unique_peak1_30_5_2.09254201840487_3.63123350992359_3.68490442130631 chr19 55544879 55545340 + 3.68490442130631 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 157095 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631-2 chr10 80226706 80226985 + 3.68490442130631 NA intron (NM_023431, intron 1 of 13) CpG 247 NM_023431 68114 Mm.273418 NM_023431 ENSMUSG00000020156 Mum1 2610019J09|9430059D04Rik|UBE-1C2 melanoma associated antigen (mutated) 1 protein-coding unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631-6 chr15 76270023 76270354 + 3.68490442130631 NA promoter-TSS (NR_045747) promoter-TSS (NR_045747) -349 NR_045747 100038659 Mm.448549 NR_045747 ENSMUSG00000115946 Mirt2 Gm10872|Gm24562 myocardial infraction associated transcript 2 ncRNA unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631-5 chr14 67933809 67934107 + 3.68490442130631 NA promoter-TSS (NM_177780) promoter-TSS (NM_177780) -386 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding unique_peak1_30_5_2.09254201840487_3.63123350992359_3.68490442130631-3 chr9 32749329 32749726 + 3.68490442130631 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 53485 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631 chr1 73962537 73962954 + 3.68490442130631 NA intron (NM_001289895, intron 18 of 32) intron (NM_001289895, intron 18 of 32) -98279 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak1_30_5_2.09254201840487_3.63123350992359_3.68490442130631-2 chr2 32621746 32622049 + 3.68490442130631 NA intron (NM_001198790, intron 1 of 6) intron (NM_001198790, intron 1 of 6) 139 NM_001198790 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631-4 chr11 68854404 68854867 + 3.68490442130631 NA Intergenic Intergenic -1504 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding unique_peak1_31_5_2.1380225639234_3.65397378268285_3.68490442130631-7 chr16 93186368 93186569 + 3.68490442130631 NA Intergenic Intergenic 166721 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_144_65_0.843120821199449_6.46595452995818_3.68241482541237 chr2 112454604 112455963 + 3.68241482541237 NA exon (NM_133749, exon 1 of 5) exon (NM_133749, exon 1 of 5) 258 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding common_peak1_158_74_0.790731987428191_6.62418468420998_3.68237801621386 chr11 96296488 96298601 + 3.68237801621386 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -1530 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_179_87_0.737826569642798_6.8283449034587_3.67936153286375 chr16 23320420 23321710 + 3.67936153286375 NA 5' UTR (NM_001252506, exon 3 of 7) 5' UTR (NM_001252506, exon 3 of 7) 30595 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_65_103_-0.940428713316577_6.2302253614828_3.67799106173242 chr4 156193345 156194884 + 3.67799106173242 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 3374 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_117_49_0.948489915974711_6.11810114776208_3.66966533606565 chr14 34088333 34089697 + 3.66966533606565 NA intron (NM_013473, intron 1 of 11) intron (NM_013473, intron 1 of 11) 3036 NM_013473 11752 Mm.3267 NM_013473 ENSMUSG00000021950 Anxa8 AI466995|Anx8 annexin A8 protein-coding common_peak1_208_105_0.683323378787969_7.06958214395718_3.66898103658661 chr3 32363490 32366116 + 3.66898103658661 NA promoter-TSS (NR_027966) promoter-TSS (NR_027966) -686 NR_027966 67576 Mm.435324 NR_027966 4930429B21Rik - RIKEN cDNA 4930429B21 gene ncRNA unique_peak1_40_9_1.75608645228632_4.19997132103052_3.66464198368356-2 chr18 75491802 75492121 + 3.66464198368356 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -22684 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_40_9_1.75608645228632_4.19997132103052_3.66464198368356 chr13 97250486 97251133 + 3.66464198368356 NA 3' UTR (NM_007930, exon 3 of 3) 3' UTR (NM_007930, exon 3 of 3) 9704 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak1_40_9_1.75608645228632_4.19997132103052_3.66464198368356-4 chr3 81918000 81918396 + 3.66464198368356 NA Intergenic Intergenic -14403 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding unique_peak1_40_9_1.75608645228632_4.19997132103052_3.66464198368356-3 chr19 44266826 44267272 + 3.66464198368356 NA Intergenic CpG -26627 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_32_64_-1.2553018286307_5.39471689871311_3.66433286712819 chr4 138463035 138463953 + 3.66433286712819 NA Intergenic (CAGA)n|Simple_repeat|Simple_repeat 8346 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_88_33_1.10084438514959_5.63788503382513_3.66131662274392 chr14 51986230 51987231 + 3.66131662274392 NA non-coding (NR_045728, exon 3 of 3) non-coding (NR_045728, exon 3 of 3) 1897 NM_198249 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding common_peak1_169_81_0.757825792325758_6.73646490078096_3.66098302534433 chr3 90537314 90538451 + 3.66098302534433 NA intron (NM_001356605, intron 1 of 2) intron (NM_001356605, intron 1 of 2) 628 NM_001356605 67860 Mm.331185 NM_026416 ENSMUSG00000074457 S100a16 2300002L21Rik|AI325039|AI663996|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding unique_peak1_63_20_1.32361266229255_5.05412375392503_3.66087189246279-3 chr3 27655168 27656054 + 3.66087189246279 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 54841 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_63_20_1.32361266229255_5.05412375392503_3.66087189246279-2 chr15 99341851 99342955 + 3.66087189246279 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 28079 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding unique_peak1_63_20_1.32361266229255_5.05412375392503_3.66087189246279 chr1 155212552 155213515 + 3.66087189246279 NA Intergenic Intergenic 54330 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_51_14_1.51159259927335_4.66268689524519_3.65980906459644 chr11 96302027 96302808 + 3.65980906459644 NA TTS (NM_008269) TTS (NM_008269) -1095 NM_008268 15413 Mm.207 NM_008268 ENSMUSG00000038700 Hoxb5 AI385717|Hox-2.1 homeobox B5 protein-coding common_peak2_16_43_-1.6425457817276_4.6381587277735_3.65980906459644 chr12 25094538 25094963 + 3.65980906459644 NA intron (NM_010496, intron 2 of 2) intron (NM_010496, intron 2 of 2) 1342 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding unique_peak1_81_29_1.16406897199192_5.48892508160448_3.6584249276327 chr11 97025378 97026230 + 3.6584249276327 NA non-coding (NR_133649, exon 1 of 2) non-coding (NR_133649, exon 1 of 2) 614 NR_133649 100127433 Mm.156282 NR_133649 ENSMUSG00000087067 Gm11532 Sp6os predicted gene 11532 ncRNA common_peak2_81_29_1.16406897199192_5.48892508160448_3.6584249276327 chr3 31495633 31496204 + 3.6584249276327 NA Intergenic Intergenic -185599 NM_172861 241919 Mm.285366 NM_172861 ENSMUSG00000069072 Slc7a14 A930013N06|BC061928 solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 protein-coding unique_peak1_84_31_1.12243277651709_5.56121638825854_3.65767611553962 chr14 70288957 70290108 + 3.65767611553962 NA promoter-TSS (NM_008915) promoter-TSS (NM_008915) -35 NM_001304992 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding unique_peak1_33_6_2.00247593527885_3.80859288969703_3.65509904868667-3 chr5 64229588 64230223 + 3.65509904868667 NA promoter-TSS (NM_001289514) promoter-TSS (NM_001289514) -452 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_33_6_2.00247593527885_3.80859288969703_3.65509904868667-2 chr5 16632505 16632856 + 3.65509904868667 NA Intergenic Intergenic 78779 NM_001289461 15234 Mm.267078 NM_010427 ENSMUSG00000028864 Hgf C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF hepatocyte growth factor protein-coding unique_peak1_33_6_2.00247593527885_3.80859288969703_3.65509904868667-4 chr9 51104085 51104523 + 3.65509904868667 NA promoter-TSS (NR_029655) promoter-TSS (NR_029655) -659 NR_029655 723849 NR_029655 ENSMUSG00000065492 Mir34b Mirn34b|mir-34b|mmu-mir-34b microRNA 34b ncRNA unique_peak1_33_6_2.00247593527885_3.80859288969703_3.65509904868667 chr15 38938243 38938568 + 3.65509904868667 NA intron (NM_080640, intron 1 of 1) B3|SINE|B2 4496 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_526_319_0.414202298637589_8.52902924420616_3.64967068085098 chr11 96252402 96256982 + 3.64967068085098 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) 3032 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA unique_peak1_38_8_1.83644877524026_4.08814938906244_3.64934937127727-3 chr6 91713680 91714218 + 3.64934937127727 NA intron (NM_009320, intron 2 of 14) intron (NM_009320, intron 2 of 14) 29882 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_38_8_1.83644877524026_4.08814938906244_3.64934937127727 chr11 75652115 75652601 + 3.64934937127727 NA intron (NM_001080774, intron 1 of 31) L2c|LINE|L2 208 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding unique_peak1_38_8_1.83644877524026_4.08814938906244_3.64934937127727-2 chr5 124165388 124166080 + 3.64934937127727 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) 21448 NM_001289472 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding common_peak2_396_230_0.478600513465914_8.09104929814901_3.64620966576794 chr3 96160583 96163240 + 3.64620966576794 NA promoter-TSS (NM_181409) promoter-TSS (NM_181409) -59 NM_181409 194126 Mm.268536 NM_181409 ENSMUSG00000045934 Mtmr11 AI035306|BC051083|Cra myotubularin related protein 11 protein-coding unique_peak1_57_17_1.40498801993495_4.87241901140979_3.645822589496-2 chr6 71934534 71935658 + 3.645822589496 NA intron (NM_009088, intron 12 of 33) RSINE1|SINE|B4 26043 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding unique_peak1_57_17_1.40498801993495_4.87241901140979_3.645822589496 chr17 44738368 44739020 + 3.645822589496 NA intron (NM_001271627, intron 1 of 7) intron (NM_001271627, intron 1 of 7) -2046 NM_001145920 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak1_58_17_1.42947608388037_4.8846630433825_3.645822589496 chr5 137629163 137629773 + 3.645822589496 NA intron (NR_033148, intron 1 of 21) CpG 345 NR_033148 100316903 Mm.200763 NR_033148 Gm20605 Lrch4-sap25 predicted gene 20605 ncRNA unique_peak2_8_30_-2.04837510256768_3.93000875910303_3.64499996644215 chr9 24503459 24503860 + 3.64499996644215 NA promoter-TSS (NM_172920) promoter-TSS (NM_172920) -519 NM_172920 244745 Mm.38526 NM_172920 ENSMUSG00000043067 Dpy19l1 1100001I19Rik|6030402K12|AI225861|AW558481 dpy-19-like 1 (C. elegans) protein-coding unique_peak2_7_30_-2.21710128659583_3.84564566708896_3.64499996644215-2 chr12 10518286 10518940 + 3.64499996644215 NA intron (NR_110487, intron 11 of 11) intron (NR_110487, intron 11 of 11) 72225 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak2_7_30_-2.21710128659583_3.84564566708896_3.64499996644215 chr1 43217765 43218006 + 3.64499996644215 NA Intergenic Intergenic -21124 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_35_7_1.8917112486727_3.94585562433635_3.64499996644214-4 chr9 32695206 32695636 + 3.64499996644214 NA promoter-TSS (NM_011808) promoter-TSS (NM_011808) -621 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_35_7_1.8917112486727_3.94585562433635_3.64499996644214-3 chr8 104375474 104375948 + 3.64499996644214 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 20096 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding unique_peak1_35_7_1.8917112486727_3.94585562433635_3.64499996644214 chr10 128917675 128918277 + 3.64499996644214 NA exon (NM_134006, exon 3 of 5) exon (NM_134006, exon 3 of 5) 1321 NM_001358527 19682 Mm.439856 NM_134006 ENSMUSG00000025350 Rdh5 9-cis|AI987873|RDH4|cRDH retinol dehydrogenase 5 protein-coding unique_peak1_35_7_1.8917112486727_3.94585562433635_3.64499996644214-2 chr8 22754871 22755385 + 3.64499996644214 NA Intergenic Intergenic -2594 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-12 chr11 61929140 61929455 + 3.64038867156802 NA intron (NM_019921, intron 1 of 14) intron (NM_019921, intron 1 of 14) 960 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-6 chr10 9638712 9638948 + 3.64038867156802 NA intron (NM_177271, intron 1 of 1) intron (NM_177271, intron 1 of 1) 36378 NM_177271 320825 Mm.101115 NM_177271 ENSMUSG00000060487 Samd5 E130306M17Rik sterile alpha motif domain containing 5 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-17 chr14 57755252 57755517 + 3.64038867156802 NA Intergenic Intergenic -9261 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-37 chr9 108679978 108680255 + 3.64038867156802 NA exon (NM_020520, exon 5 of 9) exon (NM_020520, exon 5 of 9) -12027 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-23 chr3 40006704 40006982 + 3.64038867156802 NA Intergenic Intergenic 516069 NR_040445 100040882 Mm.272869 NR_040445 ENSMUSG00000037884 1700017G19Rik - RIKEN cDNA 1700017G19 gene ncRNA unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802 chr1 69285450 69285878 + 3.64038867156802 NA Intergenic L2a|LINE|L2 -177605 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-5 chr1 177703033 177703220 + 3.64038867156802 NA Intergenic Intergenic -26688 NM_027077 69428 Mm.84467 NM_027077 ENSMUSG00000015962 1700016C15Rik - RIKEN cDNA 1700016C15 gene protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-26 chr3 90525823 90526118 + 3.64038867156802 NA promoter-TSS (NM_001163526) promoter-TSS (NM_001163526) -879 NM_025393 66166 Mm.24006 NM_025393 ENSMUSG00000042306 S100a14 1110013O05Rik|S100a15|S114 S100 calcium binding protein A14 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-2 chr1 106684906 106685155 + 3.64038867156802 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 29260 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-14 chr11 120631600 120631912 + 3.64038867156802 NA intron (NM_010756, intron 1 of 2) intron (NM_010756, intron 1 of 2) 1791 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding unique_peak2_0_14_-4.14863063309775_1.83257527905965_3.64038867156802 chr18 25071484 25071781 + 3.64038867156802 NA intron (NM_001289654, intron 14 of 24) intron (NM_001289654, intron 14 of 24) 94333 NM_001142697 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-4 chr1 164450055 164450263 + 3.64038867156802 NA intron (NM_009721, intron 2 of 5) intron (NM_009721, intron 2 of 5) 8196 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-20 chr15 11037432 11037674 + 3.64038867156802 NA 5' UTR (NM_178717, exon 1 of 1) 5' UTR (NM_178717, exon 1 of 1) 415 NM_178717 239336 Mm.209312 NM_178717 ENSMUSG00000060735 Rxfp3 BC053073|GPCR135|Rln3r1|Salpr relaxin family peptide receptor 3 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-22 chr2 30724403 30724698 + 3.64038867156802 NA Intergenic Intergenic 3340 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-19 chr15 5237453 5237651 + 3.64038867156802 NA intron (NM_001136079, intron 2 of 2) intron (NM_001136079, intron 2 of 2) 6635 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-34 chr9 75206815 75207166 + 3.64038867156802 NA intron (NM_010864, intron 35 of 40) intron (NM_010864, intron 35 of 40) -25024 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-25 chr3 87146613 87146802 + 3.64038867156802 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 28040 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-13 chr11 74526827 74527028 + 3.64038867156802 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 63231 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-28 chr5 113164743 113164959 + 3.64038867156802 NA Intergenic Intergenic -1538 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-7 chr10 24379667 24379964 + 3.64038867156802 NA Intergenic Intergenic 156298 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-16 chr13 41823580 41823818 + 3.64038867156802 NA intron (NM_001145875, intron 2 of 6) intron (NM_001145875, intron 2 of 6) 23789 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-35 chr9 97956231 97956439 + 3.64038867156802 NA intron (NM_022319, intron 1 of 17) intron (NM_022319, intron 1 of 17) -47085 NR_110443 66737 Mm.445908 NR_110443 ENSMUSG00000090255 4921534H16Rik - RIKEN cDNA 4921534H16 gene ncRNA unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-24 chr3 65867092 65867481 + 3.64038867156802 NA Intergenic Intergenic 90963 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-32 chr7 112025405 112025672 + 3.64038867156802 NA intron (NM_133758, intron 1 of 27) intron (NM_133758, intron 1 of 27) 2032 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-29 chr6 61180517 61180862 + 3.64038867156802 NA intron (NM_183310, intron 1 of 10) CpG 121 NR_040287 100504262 Mm.438066 NR_040287 A730020E08Rik - RIKEN cDNA A730020E08 gene ncRNA unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-27 chr5 66849485 66849858 + 3.64038867156802 NA intron (NM_001001980, intron 1 of 25) GA-rich|Low_complexity|Low_complexity 103831 NM_001001980 77569 Mm.374778 NM_001001980 ENSMUSG00000037736 Limch1 3732412D22Rik|mKIAA1102 LIM and calponin homology domains 1 protein-coding unique_peak2_0_14_-4.14863063309775_1.83257527905965_3.64038867156802-2 chr5 38543880 38544158 + 3.64038867156802 NA intron (NM_011715, intron 5 of 14) intron (NM_011715, intron 5 of 14) 17576 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-15 chr13 36283046 36283253 + 3.64038867156802 NA intron (NM_001039189, intron 3 of 5) intron (NM_001039189, intron 3 of 5) 165506 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-11 chr11 59411806 59411997 + 3.64038867156802 NA intron (NM_001356454, intron 3 of 3) intron (NM_001356454, intron 3 of 3) -36248 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-30 chr6 108327594 108327809 + 3.64038867156802 NA intron (NM_010585, intron 4 of 61) intron (NM_010585, intron 4 of 61) 114605 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-33 chr9 43801595 43801830 + 3.64038867156802 NA intron (NM_021424, intron 5 of 5) intron (NM_021424, intron 5 of 5) 57136 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-9 chr10 127295526 127296002 + 3.64038867156802 NA TTS (NM_001171582) TTS (NM_001171582) 4971 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-10 chr11 43896472 43896756 + 3.64038867156802 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) 4623 NM_001284380 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-31 chr6 118367997 118368320 + 3.64038867156802 NA Intergenic Intergenic 51259 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-8 chr10 95919016 95919238 + 3.64038867156802 NA Intergenic Intergenic -21536 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-3 chr1 131086016 131086215 + 3.64038867156802 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 11728 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-21 chr15 38707201 38707436 + 3.64038867156802 NA Intergenic Intergenic 21198 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-18 chr14 74733658 74733853 + 3.64038867156802 NA intron (NM_001285423, intron 1 of 8) intron (NM_001285423, intron 1 of 8) 1458 NM_016903 13885 Mm.38055 NM_016903 ENSMUSG00000021996 Esd Es-10|Es10|FGH|sid478 esterase D/formylglutathione hydrolase protein-coding unique_peak1_16_1_2.8168858369097_2.40844291845485_3.64038867156802-36 chr9 107737061 107737310 + 3.64038867156802 NA Intergenic Intergenic -26710 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak2_47_83_-1.08849675590676_5.84806904482538_3.63527207562039 chr1 43218395 43219259 + 3.63527207562039 NA Intergenic Intergenic -22066 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_67_22_1.27921392170619_5.16316891691011_3.62981913803282 chr8 86857104 86858045 + 3.62981913803282 NA intron (NM_030563, intron 2 of 6) B1_Mur1|SINE|Alu 27684 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_214_256_-0.553835079377056_7.72870700950535_3.62634432749974 chr15 103213114 103215969 + 3.62634432749974 NA intron (NM_001358950, intron 1 of 4) intron (NM_001358950, intron 1 of 4) 811 NM_007626 12419 Mm.262059 NM_007626 ENSMUSG00000009575 Cbx5 2610029O15Rik|C75991|HP1|Hp1a|Hp1alpha chromobox 5 protein-coding common_peak2_97_38_1.04090094493056_5.80585269132753_3.61946825268519 chr15 76460928 76461647 + 3.61946825268519 NA intron (NM_013481, intron 3 of 15) intron (NM_013481, intron 3 of 15) 3849 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak1_45_80_-1.09699670108837_5.79135165234044_3.61946825268519 chr5 99978317 99978904 + 3.61946825268519 NA exon (NM_001077267, exon 1 of 7) exon (NM_001077267, exon 1 of 7) 328 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-31 chr2 31251510 31251744 + 3.61235994796777 NA intron (NM_019681, intron 1 of 7) intron (NM_019681, intron 1 of 7) 5704 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-41 chr5 115125734 115126004 + 3.61235994796777 NA intron (NM_175352, intron 4 of 4) PB1D9|SINE|Alu -6523 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-38 chr4 55100670 55100935 + 3.61235994796777 NA Intergenic Intergenic 152857 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-7 chr1 185112144 185112349 + 3.61235994796777 NA Intergenic Intergenic -91922 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-28 chr19 17289434 17289651 + 3.61235994796777 NA Intergenic Intergenic 49963 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-44 chr7 122015392 122015621 + 3.61235994796777 NA intron (NM_028758, intron 1 of 16) intron (NM_028758, intron 1 of 16) 5692 NM_028758 74105 Mm.29619 NM_028758 ENSMUSG00000030872 Gga2 1200007E24Rik|mKIAA1080 golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-10 chr11 18260878 18261156 + 3.61235994796777 NA Intergenic Intergenic 165031 NR_131129 327872 NR_131129 ENSMUSG00000085453 Gm12018 - predicted gene 12018 ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-39 chr4 125135343 125135533 + 3.61235994796777 NA Intergenic Intergenic -7557 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777 chr1 10990414 10990904 + 3.61235994796777 NA Intergenic Intergenic -2806 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-9 chr10 24312223 24312451 + 3.61235994796777 NA Intergenic Intergenic 88820 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-23 chr16 22076069 22076357 + 3.61235994796777 NA intron (NM_183029, intron 9 of 15) intron (NM_183029, intron 9 of 15) 66729 NM_001357424 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-13 chr13 31849782 31849972 + 3.61235994796777 NA intron (NM_146041, intron 9 of 10) intron (NM_146041, intron 9 of 10) 43231 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-45 chr8 26440988 26441259 + 3.61235994796777 NA Intergenic Intergenic 282954 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-2 chr1 132202075 132202347 + 3.61235994796777 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) 4123 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-6 chr1 180343164 180343358 + 3.61235994796777 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -12712 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-26 chr17 44770593 44770814 + 3.61235994796777 NA intron (NM_001271627, intron 1 of 7) intron (NM_001271627, intron 1 of 7) -6463 NM_001357320 109115 Mm.431327 NM_178652 ENSMUSG00000038954 Supt3 2310066G22Rik|AI315192|SPT3|SPT3L|Supt3h suppressor of Ty 3 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-21 chr15 64449122 64449419 + 3.61235994796777 NA Intergenic Intergenic -66351 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-5 chr1 180310030 180310252 + 3.61235994796777 NA Intergenic PB1D10|SINE|Alu -20335 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-36 chr3 158090419 158090618 + 3.61235994796777 NA intron (NM_001081358, intron 27 of 27) intron (NM_001081358, intron 27 of 27) 53836 NM_001289524 67144 Mm.358704 NM_024194 ENSMUSG00000063052 Lrrc40 2610040E16Rik|AI837674 leucine rich repeat containing 40 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-40 chr4 138276843 138277153 + 3.61235994796777 NA intron (NM_010623, intron 4 of 14) intron (NM_010623, intron 4 of 14) 14747 NM_010623 16559 Mm.271936 NM_010623 ENSMUSG00000028758 Kif17 5930435E01Rik|AW492270|Kif17b|mKIAA1405 kinesin family member 17 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-37 chr4 5698670 5698859 + 3.61235994796777 NA intron (NM_173426, intron 1 of 2) intron (NM_173426, intron 1 of 2) -25548 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-29 chr19 40232874 40233078 + 3.61235994796777 NA intron (NM_016861, intron 4 of 6) intron (NM_016861, intron 4 of 6) 38640 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-43 chr7 80868928 80869237 + 3.61235994796777 NA intron (NM_009553, intron 2 of 2) intron (NM_009553, intron 2 of 2) 6974 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-11 chr11 43933011 43933212 + 3.61235994796777 NA Intergenic Intergenic -31874 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-4 chr1 166045017 166045278 + 3.61235994796777 NA Intergenic Intergenic -42513 NM_198932 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-16 chr14 48204580 48204822 + 3.61235994796777 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 5985 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-24 chr16 34372127 34372378 + 3.61235994796777 NA intron (NM_177357, intron 3 of 59) intron (NM_177357, intron 3 of 59) 141775 NM_001164268 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-14 chr13 53031414 53031645 + 3.61235994796777 NA Intergenic Intergenic -50490 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-22 chr15 83495150 83495464 + 3.61235994796777 NA intron (NM_001357953, intron 9 of 11) intron (NM_001357953, intron 9 of 11) 15600 NM_178869 319953 Mm.235007 NM_178869 ENSMUSG00000022442 Ttll1 6330444E16Rik|AV014541 tubulin tyrosine ligase-like 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-3 chr1 151753649 151753874 + 3.61235994796777 NA intron (NR_151473, intron 1 of 1) intron (NR_151473, intron 1 of 1) 966 NR_151474 102640772 NR_151473 ENSMUSG00000100594 2810414N06Rik - RIKEN cDNA 2810414N06 gene ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-34 chr3 107703484 107703671 + 3.61235994796777 NA Intergenic Intergenic -7017 NM_145542 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-47 chr8 31725105 31725299 + 3.61235994796777 NA Intergenic Intergenic 193001 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-32 chr3 27646902 27647101 + 3.61235994796777 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) -62006 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-42 chr6 17497611 17497799 + 3.61235994796777 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 33748 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-35 chr3 145338986 145339257 + 3.61235994796777 NA intron (NM_027770, intron 8 of 59) B4|SINE|B4 46649 NM_001317733 71355 Mm.235570 NM_027770 ENSMUSG00000028197 Col24a1 5430404K19Rik collagen, type XXIV, alpha 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-27 chr17 74780338 74780548 + 3.61235994796777 NA intron (NM_152817, intron 11 of 19) intron (NM_152817, intron 11 of 19) 62693 NM_152817 74196 Mm.209503 NM_152817 ENSMUSG00000024078 Ttc27 2610511O17Rik tetratricopeptide repeat domain 27 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-46 chr8 31303656 31303925 + 3.61235994796777 NA Intergenic (TTTTA)n|Simple_repeat|Simple_repeat -63959 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-48 chr8 92967322 92967578 + 3.61235994796777 NA intron (NM_009209, intron 1 of 13) intron (NM_009209, intron 1 of 13) 6403 NM_009209 20538 Mm.57040 NM_009209 ENSMUSG00000055368 Slc6a2 NE-T|NET|Slc6a5 solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-50 chr9 108240843 108241216 + 3.61235994796777 NA intron (NM_001276485, intron 1 of 2) intron (NM_001276485, intron 1 of 2) 22786 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-12 chr11 54439155 54439478 + 3.61235994796777 NA intron (NM_173753, intron 1 of 17) intron (NM_173753, intron 1 of 17) 1137 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-19 chr14 66041260 66041471 + 3.61235994796777 NA intron (NM_009618, intron 14 of 20) intron (NM_009618, intron 14 of 20) -32155 NM_178747 268756 Mm.26207 NM_178747 ENSMUSG00000034450 Gulo 5730581M22|AU018375|BC028822|GLO|LGO|sfx|unh|unhip gulonolactone (L-) oxidase protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-17 chr14 63308670 63308862 + 3.61235994796777 NA Intergenic Intergenic -63495 NM_001310610 14463 Mm.247669 NM_008092 ENSMUSG00000021944 Gata4 Gata-4 GATA binding protein 4 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-25 chr17 26954066 26954272 + 3.61235994796777 NA intron (NM_001281491, intron 5 of 18) intron (NM_001281491, intron 5 of 18) -6050 NR_037244 100526534 NR_037244 ENSMUSG00000093118 Mir3083 mir-3083|mmu-mir-3083 microRNA 3083 ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-49 chr8 124000268 124000459 + 3.61235994796777 NA intron (NM_001357315, intron 4 of 4) intron (NM_001357315, intron 4 of 4) -17241 NM_019552 56199 Mm.274243 NM_019552 ENSMUSG00000031974 Abcb10 Abc-me|Abcb12 ATP-binding cassette, sub-family B (MDR/TAP), member 10 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-15 chr13 63305591 63305887 + 3.61235994796777 NA 3' UTR (NM_001042673, exon 16 of 16) 3' UTR (NM_001042673, exon 16 of 16) -4456 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-30 chr2 24963359 24963621 + 3.61235994796777 NA exon (NM_026044, exon 3 of 9) exon (NM_026044, exon 3 of 9) 1068 NM_026044 67228 Mm.389248 NM_026044 ENSMUSG00000026975 Dph7 2810443J12Rik|AW060693|Wdr85 diphthamine biosynethesis 7 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-18 chr14 65969132 65969389 + 3.61235994796777 NA intron (NM_013492, intron 1 of 8) MIR3|SINE|MIR 777 NM_013492 12759 Mm.200608 NM_013492 ENSMUSG00000022037 Clu AI893575|ApoJ|Cli|D14Ucla3|SP-40|Sgp-2|Sgp2|Sugp-2 clusterin protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-20 chr14 121371483 121371793 + 3.61235994796777 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 7592 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-8 chr1 190834896 190835102 + 3.61235994796777 NA intron (NM_178775, intron 7 of 14) intron (NM_178775, intron 7 of 14) 76771 NM_178775 320119 Mm.220912 NM_178775 ENSMUSG00000089872 Rps6kc1 AA682037|B130003F20Rik|C80612|Rpk118 ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak1_12_0_3.43259315402836_1.71629657701418_3.61235994796777-33 chr3 75954822 75955050 + 3.61235994796777 NA intron (NM_001291069, intron 1 of 15) intron (NM_001291069, intron 1 of 15) 2013 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak1_141_64_0.835197949105034_6.43996678758097_3.61002338187679 chr9 106371409 106373320 + 3.61002338187679 NA intron (NM_153459, intron 2 of 2) intron (NM_153459, intron 2 of 2) 3732 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_235_123_0.631094815789316_7.26974371828153_3.60981880422134 chr5 104458554 104460486 + 3.60981880422134 NA promoter-TSS (NM_008861) promoter-TSS (NM_008861) 63 NM_008861 18764 Mm.6442 NM_008861 ENSMUSG00000034462 Pkd2 C030034P18Rik|PC2|TRPP2 polycystic kidney disease 2 protein-coding common_peak1_64_101_-0.934285248335748_6.20528271780362_3.60453815999044 chr5 112276768 112277434 + 3.60453815999044 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 410 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_105_43_0.979283457059319_5.94907334716696_3.59961219983477 chr14 46821425 46822162 + 3.59961219983477 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 449 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding unique_peak1_61_19_1.34852144466542_4.99618881722007_3.59866429024318-2 chr3 152144284 152145097 + 3.59866429024318 NA intron (NM_016867, intron 1 of 5) intron (NM_016867, intron 1 of 5) 21210 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding unique_peak1_61_19_1.34852144466542_4.99618881722007_3.59866429024318 chr15 9071548 9072210 + 3.59866429024318 NA intron (NM_001040395, intron 1 of 12) CpG 619 NM_001040395 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak2_22_51_-1.45053143677159_4.9751739997553_3.59866429024318 chr8 86874654 86875262 + 3.59866429024318 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 10300 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_61_19_1.34852144466542_4.99618881722007_3.59866429024318 chr16 87440429 87440848 + 3.59866429024318 NA promoter-TSS (NM_016924) promoter-TSS (NM_016924) -46 NM_016924 53858 Mm.162406 NM_016924 ENSMUSG00000041079 Rwdd2b ORF5 RWD domain containing 2B protein-coding unique_peak2_2_21_-3.12739103347231_2.89573610190114_3.59864904409228 chr15 98155430 98155754 + 3.59864904409228 NA intron (NM_001170711, intron 1 of 3) intron (NM_001170711, intron 1 of 3) -9890 NM_001170710 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding unique_peak2_3_21_-2.71528161527301_3.10179081100079_3.59864904409228 chr14 31207148 31207665 + 3.59864904409228 NA promoter-TSS (NM_022656) promoter-TSS (NM_022656) -580 NM_001347583 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding unique_peak2_2_21_-3.12739103347231_2.89573610190114_3.59864904409228-2 chr4 127373012 127373296 + 3.59864904409228 NA Intergenic Intergenic -14990 NM_010291 14622 Mm.26859 NM_010291 ENSMUSG00000042357 Gjb5 Cnx31.1|Cx31.1|Gjb-5 gap junction protein, beta 5 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-2 chr10 7014475 7014905 + 3.59864904409227 NA intron (NM_001039652, intron 5 of 5) intron (NM_001039652, intron 5 of 5) 8495 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-9 chr7 116290798 116291220 + 3.59864904409227 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 17367 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-6 chr18 6033611 6034049 + 3.59864904409227 NA intron (NM_001039692, intron 13 of 18) intron (NM_001039692, intron 13 of 18) 102268 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-7 chr8 80868364 80868658 + 3.59864904409227 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 11968 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227 chr1 181015134 181015357 + 3.59864904409227 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 2324 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-3 chr11 59837154 59837485 + 3.59864904409227 NA intron (NM_011991, intron 1 of 11) intron (NM_011991, intron 1 of 11) 2448 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-7 chr5 21247606 21247966 + 3.59864904409227 NA intron (NM_001359876, intron 14 of 29) intron (NM_001359876, intron 14 of 29) 61519 NM_001359877 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-4 chr16 57750127 57750612 + 3.59864904409227 NA intron (NM_007739, intron 1 of 3) MIR3|SINE|MIR 4368 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-5 chr13 109243662 109243913 + 3.59864904409227 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -80957 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-3 chr14 66255884 66256208 + 3.59864904409227 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 25006 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-8 chr8 122011992 122012289 + 3.59864904409227 NA intron (NM_016812, intron 11 of 13) intron (NM_016812, intron 11 of 13) 34116 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-6 chr7 114066455 114066702 + 3.59864904409227 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 51203 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-5 chr17 87861509 87861981 + 3.59864904409227 NA Intergenic Intergenic -63751 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227-2 chr14 12070295 12070504 + 3.59864904409227 NA intron (NM_008981, intron 5 of 29) intron (NM_008981, intron 5 of 29) -119544 NM_001347593 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding unique_peak1_24_3_2.36935384172555_3.18467692086278_3.59864904409227 chr11 117994737 117995119 + 3.59864904409227 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) -7342 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-4 chr12 51882662 51882875 + 3.59864904409227 NA intron (NM_177171, intron 33 of 35) intron (NM_177171, intron 33 of 35) -53232 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak1_25_3_2.42553817445511_3.21276908722756_3.59864904409227-8 chr7 70354451 70354888 + 3.59864904409227 NA exon (NM_009697, exon 3 of 3) exon (NM_009697, exon 3 of 3) 5924 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak2_183_90_0.72094870245107_6.86826899142423_3.59304565212536 chr3 21962707 21964280 + 3.59304565212536 NA Intergenic Intergenic -113159 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_55_16_1.43718127296834_4.80605347773451_3.58938495778628 chr6 17493570 17493938 + 3.58938495778628 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 29797 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_86_32_1.11135450424627_5.60007137148159_3.58902746971263 chr2 30265817 30266996 + 3.58902746971263 NA promoter-TSS (NM_001281829) promoter-TSS (NM_001281829) 203 NM_172267 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_188_230_-0.584598120515012_7.55944998115855_3.58895146636272 chr8 106510680 106512552 + 3.58895146636272 NA intron (NM_007665, intron 2 of 15) CpG 764 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak2_146_188_-0.655103658200808_7.23469059512067_3.5880731653202 chr13 60175434 60177435 + 3.5880731653202 NA exon (NM_008086, exon 1 of 1) exon (NM_008086, exon 1 of 1) 1101 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding common_peak2_33_65_-1.234563262022_5.42711248834745_3.587698436266 chr5 140065062 140066333 + 3.587698436266 NA intron (NR_152617, intron 16 of 16) intron (NR_152617, intron 16 of 16) 109221 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak1_78_28_1.1595866711477_5.43777433070142_3.587698436266 chr2 92375346 92376215 + 3.587698436266 NA intron (NM_145122, intron 1 of 10) intron (NM_145122, intron 1 of 10) 541 NM_145122 18633 Mm.202782 NM_145122 ENSMUSG00000027222 Pex16 - peroxisomal biogenesis factor 16 protein-coding unique_peak1_82_30_1.13412731050404_5.5212599656389_3.58605785848359 chr2 16357029 16358365 + 3.58605785848359 NA intron (NM_026162, intron 1 of 13) intron (NM_026162, intron 1 of 13) 1393 NM_026162 67448 Mm.313938 NM_026162 ENSMUSG00000026748 Plxdc2 1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r plexin domain containing 2 protein-coding common_peak1_35_68_-1.21681320810546_5.50011785272544_3.58605785848359 chr5 151369056 151369484 + 3.58605785848359 NA intron (NR_045700, intron 1 of 3) intron (NR_045700, intron 1 of 3) 595 NR_045699 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak2_49_84_-1.04709207398539_5.88584489914501_3.57962598236174 chr14 21051576 21052426 + 3.57962598236174 NA promoter-TSS (NM_134079) promoter-TSS (NM_134079) 441 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding common_peak2_89_129_-0.818054645175115_6.6133404904409_3.57764330776532 chr16 11175566 11177084 + 3.57764330776532 NA promoter-TSS (NM_145931) promoter-TSS (NM_145931) 68 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak1_152_71_0.794522080775805_6.56718604183022_3.57381354499645 chr19 9954344 9955968 + 3.57381354499645 NA Intergenic Intergenic -25444 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_82_121_-0.842413716671969_6.5095304792269_3.5720540597278 chr8 94806292 94808282 + 3.5720540597278 NA Intergenic Intergenic -3166 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding common_peak1_110_46_0.950152512034015_6.02966510769465_3.57104865977359 chr14 70350349 70351383 + 3.57104865977359 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 558 NM_144808 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_304_169_0.543312072772564_7.68104697252398_3.57067318809975 chr3 101602500 101604616 + 3.57067318809975 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 1149 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_157_199_-0.633343503072692_7.32718443823838_3.57008267015371 chr18 66290941 66293177 + 3.57008267015371 NA promoter-TSS (NM_178793) promoter-TSS (NM_178793) -221 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_46_12_1.57322158516096_4.48705051072157_3.56917542013723 chr7 121707073 121707393 + 3.56917542013723 NA promoter-TSS (NM_001033173) promoter-TSS (NM_001033173) 20 NM_001033173 76179 Mm.122538 NM_001033173 ENSMUSG00000063317 Usp31 6330567E21Rik|mKIAA1203 ubiquitin specific peptidase 31 protein-coding unique_peak1_46_12_1.57322158516096_4.48705051072157_3.56917542013723-2 chr19 56929467 56930170 + 3.56917542013723 NA intron (NM_001177796, intron 7 of 19) intron (NM_001177796, intron 7 of 19) 55402 NM_172840 240675 Mm.129534 NM_172840 ENSMUSG00000025082 Vwa2 Amaco von Willebrand factor A domain containing 2 protein-coding unique_peak1_46_12_1.57322158516096_4.48705051072157_3.56917542013723 chr1 58725452 58725825 + 3.56917542013723 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) -4914 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak1_46_12_1.57322158516096_4.48705051072157_3.56917542013723-3 chr2 29623927 29624807 + 3.56917542013723 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 4647 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_14_39_-1.68434057011499_4.47975780982987_3.56917542013722 chr8 64582308 64582508 + 3.56917542013722 NA Intergenic Intergenic -67967 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_14_39_-1.68434057011499_4.47975780982987_3.56917542013722 chrX 48453293 48453754 + 3.56917542013722 NA intron (NM_019680, intron 1 of 8) CpG 9609 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_142_184_-0.663762907255179_7.19950000688872_3.5667687748311 chr1 134092469 134094173 + 3.5667687748311 NA Intergenic Intergenic -14166 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_65_21_1.30057938618722_5.10972131173091_3.56455313593768-2 chr2 118760128 118760709 + 3.56455313593768 NA exon (NM_001001982, exon 5 of 11) exon (NM_001001982, exon 5 of 11) 2243 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding unique_peak1_65_21_1.30057938618722_5.10972131173091_3.56455313593768 chr15 84413802 84414591 + 3.56455313593768 NA intron (NM_001163145, intron 3 of 4) intron (NM_001163145, intron 3 of 4) 32414 NM_001347543 72301 Mm.275387 NM_001163145 ENSMUSG00000062760 1810041L15Rik Kiaa1644|Shisal1 RIKEN cDNA 1810041L15 gene protein-coding common_peak2_24_54_-1.41200587179911_5.07535677762511_3.56455313593768 chr16 18628535 18629252 + 3.56455313593768 NA intron (NM_213614, intron 2 of 11) intron (NM_213614, intron 2 of 11) 1045 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak1_98_39_1.01891851216461_5.83138735096967_3.56168615283088 chr5 65455136 65456076 + 3.56168615283088 NA intron (NM_133697, intron 3 of 4) intron (NM_133697, intron 3 of 4) -19764 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak2_208_249_-0.55454045131092_7.68851405900663_3.55487661713928 chr6 108660714 108662877 + 3.55487661713928 NA promoter-TSS (NR_104577) promoter-TSS (NR_104577) -861 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_208_106_0.669776846950021_7.07635540987616_3.55314050129501 chr2 35256483 35257982 + 3.55314050129501 NA intron (NM_001206368, intron 1 of 16) intron (NM_001206368, intron 1 of 16) 873 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_190_95_0.697267684225861_6.93359634283409_3.55263466131926 chr7 109544396 109546087 + 3.55263466131926 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 25109 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_44_78_-1.09241260075052_5.75757444780184_3.54607065669274 chr6 112870328 112871432 + 3.54607065669274 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 76386 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_134_60_0.854411432517908_6.35794305382184_3.54208301465755 chr11 31555424 31556714 + 3.54208301465755 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 115793 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_68_23_1.23872640330255_5.20432570237243_3.54083769116365 chr14 99623543 99624685 + 3.54083769116365 NA Intergenic Intergenic 325423 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_69_23_1.2593385122514_5.21463175684686_3.54083769116365 chr6 6203762 6204876 + 3.54083769116365 NA intron (NM_001177572, intron 1 of 17) intron (NM_001177572, intron 1 of 17) 12854 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak2_504_527_-0.369349280493649_8.85971947911163_3.53993871029907 chr15 80254560 80257372 + 3.53993871029907 NA intron (NM_009716, intron 1 of 2) CpG 782 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak2_76_114_-0.864655598773186_6.41316225155778_3.53767875008242 chr8 27061098 27062871 + 3.53767875008242 NA Intergenic Intergenic 19429 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak1_138_63_0.826977051383087_6.41348852569154_3.5376787500824 chr2 71543548 71544661 + 3.5376787500824 NA 3' UTR (NM_010054, exon 3 of 3) 3' UTR (NM_010054, exon 3 of 3) 2650 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding unique_peak2_21_49_-1.45762580760442_4.91504328597251_3.53754093745205 chr6 47659459 47659791 + 3.53754093745205 NA promoter-TSS (NR_002841).2 promoter-TSS (NR_002841).2 -210 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_59_18_1.3755500521823_4.93570253953474_3.53754093745204 chr2 27475056 27475549 + 3.53754093745204 NA promoter-TSS (NM_023336) promoter-TSS (NM_023336) 96 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak2_149_69_0.806796467861552_6.53268125087574_3.53687262635831 chr8 92849925 92850666 + 3.53687262635831 NA intron (NM_008610, intron 12 of 12) intron (NM_008610, intron 12 of 12) -5038 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-6 chr10 79765794 79766173 + 3.53487848679804 NA intron (NR_027505, intron 1 of 7) intron (NR_027505, intron 1 of 7) 969 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-29 chr8 94331351 94331631 + 3.53487848679804 NA intron (NM_019415, intron 2 of 24) intron (NM_019415, intron 2 of 24) 2283 NM_001205311 20497 Mm.25804 NM_019415 ENSMUSG00000031766 Slc12a3 AI035291|NCC|NCCT|TSC solute carrier family 12, member 3 protein-coding unique_peak2_1_16_-3.33625785831281_2.41933391209393_3.53487848679804 chr1 87622229 87622462 + 3.53487848679804 NA intron (NM_001110192, intron 1 of 26) intron (NM_001110192, intron 1 of 26) 2033 NM_010566 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-3 chr1 189078255 189078465 + 3.53487848679804 NA Intergenic Intergenic -70520 NR_153196 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-24 chr4 11819489 11819779 + 3.53487848679804 NA Intergenic Intergenic 61477 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-11 chr14 36868122 36868309 + 3.53487848679804 NA Intergenic Intergenic 51320 NM_001347503 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-30 chr9 49981212 49981418 + 3.53487848679804 NA Intergenic Intergenic -181922 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-28 chr8 61804238 61804491 + 3.53487848679804 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) -44266 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-10 chr11 79102430 79102661 + 3.53487848679804 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) -42709 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-19 chr3 55096368 55096608 + 3.53487848679804 NA Intergenic Intergenic -15620 NM_001144988 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-23 chr3 137866165 137866462 + 3.53487848679804 NA intron (NM_016750, intron 4 of 4) intron (NM_016750, intron 4 of 4) -1362 NM_001033155 70604 Mm.256488 NM_001033155 ENSMUSG00000074212 Dnajb14 5730496F10Rik DnaJ heat shock protein family (Hsp40) member B14 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-4 chr1 193542523 193542877 + 3.53487848679804 NA Intergenic Intergenic -35170 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-16 chr18 37923579 37923863 + 3.53487848679804 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 11755 NM_001305981 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804 chr1 130214983 130215575 + 3.53487848679804 NA intron (NM_172485, intron 27 of 27) intron (NM_172485, intron 27 of 27) -207545 NR_151525 102640368 NR_151525 ENSMUSG00000087691 Gm15674 - predicted gene 15674 ncRNA unique_peak2_1_16_-3.33625785831281_2.41933391209393_3.53487848679804-2 chr1 182481809 182482075 + 3.53487848679804 NA intron (NM_009794, intron 11 of 20) intron (NM_009794, intron 11 of 20) 35668 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-9 chr11 59455393 59455632 + 3.53487848679804 NA non-coding (NR_037992, exon 6 of 6) non-coding (NR_037992, exon 6 of 6) 5467 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding unique_peak2_1_16_-3.33625785831281_2.41933391209393_3.53487848679804-3 chr19 28550774 28551106 + 3.53487848679804 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -127284 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-20 chr3 57494157 57494364 + 3.53487848679804 NA intron (NM_133784, intron 3 of 6) intron (NM_133784, intron 3 of 6) 68850 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-18 chr3 4286849 4287089 + 3.53487848679804 NA Intergenic Intergenic -511739 NR_045272 100503859 Mm.75172 NR_045272 ENSMUSG00000098659 1110015O18Rik - RIKEN cDNA 1110015O18 gene ncRNA unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-7 chr10 96765410 96765720 + 3.53487848679804 NA Intergenic Intergenic 148564 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-17 chr2 153144065 153144372 + 3.53487848679804 NA intron (NM_001172117, intron 10 of 12) intron (NM_001172117, intron 10 of 12) -17083 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-31 chr9 69713513 69713821 + 3.53487848679804 NA Intergenic Intergenic 47273 NM_022378 64290 Mm.440890 NM_022378 ENSMUSG00000059246 Foxb1 C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|Mf3|Twh forkhead box B1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-22 chr3 137330698 137330909 + 3.53487848679804 NA Intergenic Intergenic -10275 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-14 chr16 92788977 92789203 + 3.53487848679804 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 36984 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-12 chr14 48206678 48206923 + 3.53487848679804 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 8084 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-27 chr8 47920235 47920491 + 3.53487848679804 NA intron (NM_133791, intron 2 of 22) intron (NM_133791, intron 2 of 22) 70188 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-13 chr14 54105283 54105543 + 3.53487848679804 NA Intergenic Intergenic 148516 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-8 chr10 127603449 127603822 + 3.53487848679804 NA intron (NM_008512, intron 6 of 88) intron (NM_008512, intron 6 of 88) 17513 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-26 chr6 72272510 72272899 + 3.53487848679804 NA Intergenic Intergenic -31906 NM_001282071 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-21 chr3 87765028 87765260 + 3.53487848679804 NA intron (NM_152799, intron 1 of 24) intron (NM_152799, intron 1 of 24) 3809 NM_001289600 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-5 chr10 39730646 39731014 + 3.53487848679804 NA intron (NR_038037, intron 1 of 2) MIRc|SINE|MIR 1177 NR_038037 327744 Mm.295265 NM_183198 ENSMUSG00000087177 E130307A14Rik - RIKEN cDNA E130307A14 gene ncRNA unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-15 chr17 75202808 75203070 + 3.53487848679804 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 24158 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-25 chr4 56863583 56863866 + 3.53487848679804 NA intron (NM_018761, intron 1 of 18) intron (NM_018761, intron 1 of 18) 1487 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding unique_peak1_18_2_2.39125593339724_2.78059046741977_3.53487848679804-2 chr1 168428584 168428870 + 3.53487848679804 NA intron (NM_183355, intron 1 of 8) intron (NM_183355, intron 1 of 8) 3442 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_53_15_1.47254685090016_4.73627342545008_3.53481770417982 chr7 39449569 39450132 + 3.53481770417982 NA intron (NM_001243021, intron 1 of 5) intron (NM_001243021, intron 1 of 5) 332 NM_001243021 233147 Mm.148946 NM_001243021 ENSMUSG00000030424 Zfp939 9430025M13Rik zinc finger protein 939 protein-coding common_peak1_52_15_1.44577005526986_4.72288502763493_3.53481770417982 chr6 91580027 91580694 + 3.53481770417982 NA Intergenic Intergenic 64325 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_99_139_-0.774039134365903_6.74226344976202_3.52975968377832 chr8 36608158 36609577 + 3.52975968377832 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 5076 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_44_11_1.62640564670543_4.39816532407387_3.52967372072617 chr4 136600596 136601117 + 3.52967372072617 NA intron (NM_001356567, intron 1 of 19) PB1D10|SINE|Alu 1867 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_44_11_1.62640564670543_4.39816532407387_3.52967372072617-3 chr4 139201414 139202015 + 3.52967372072617 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 7603 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_44_11_1.62640564670543_4.39816532407387_3.52967372072617 chr12 79028636 79029071 + 3.52967372072617 NA promoter-TSS (NM_181073) promoter-TSS (NM_181073) -310 NM_181073 211945 Mm.478321 NM_181073 ENSMUSG00000060716 Plekhh1 AV308913|C77772|D630024D12Rik|mKIAA1200 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 protein-coding unique_peak2_12_37_-1.81533435941523_4.34026033373597_3.52967372072617 chr9 63657559 63658089 + 3.52967372072617 NA intron (NM_016769, intron 5 of 8) intron (NM_016769, intron 5 of 8) 55178 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_44_11_1.62640564670543_4.39816532407387_3.52967372072617-2 chr19 18712620 18713019 + 3.52967372072617 NA promoter-TSS (NM_177640) promoter-TSS (NM_177640) -417 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak2_50_85_-1.03559829513819_5.908465607133_3.52584576600981 chr11 101008665 101009689 + 3.52584576600981 NA promoter-TSS (NM_001243051) promoter-TSS (NM_001243051) -275 NM_016920 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding common_peak1_72_25_1.20397571742483_5.30242757685351_3.52554618120705 chr14 76760729 76761623 + 3.52554618120705 NA intron (NR_153763, intron 1 of 1) intron (NR_153763, intron 1 of 1) 1045 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_181_89_0.72123416855308_6.85247018060621_3.52422543348376 chr3 21962725 21964241 + 3.52422543348376 NA Intergenic Intergenic -113169 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_80_29_1.14649185751909_5.48013652436807_3.5145787661347 chr11 69883509 69884589 + 3.5145787661347 NA intron (NM_153788, intron 17 of 21) intron (NM_153788, intron 17 of 21) -1955 NR_105889 102466208 NR_105889 ENSMUSG00000104996 Mir6924 mmu-mir-6924 microRNA 6924 ncRNA common_peak1_79_29_1.12869638821667_5.47123878971685_3.5145787661347 chr11 103688461 103689095 + 3.5145787661347 NA intron (NM_019650, intron 2 of 5) intron (NM_019650, intron 2 of 5) 8932 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak1_79_29_1.12869638821667_5.47123878971685_3.5145787661347-2 chr8 123442938 123443712 + 3.5145787661347 NA promoter-TSS (NM_001281803) promoter-TSS (NM_001281803) 66 NM_001281803 23854 Mm.275127 NM_054046 ENSMUSG00000001482 Def8 AI449518|D8Ertd713e|DEF-8 differentially expressed in FDCP 8 protein-coding unique_peak1_80_29_1.14649185751909_5.48013652436807_3.5145787661347 chr12 26365214 26366497 + 3.5145787661347 NA intron (NR_130981, intron 3 of 4) intron (NR_130981, intron 3 of 4) 19145 NR_130981 75243 Mm.444753 NR_130981 ENSMUSG00000114048 4930549C15Rik - RIKEN cDNA 4930549C15 gene ncRNA unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-16 chr6 146927508 146927967 + 3.50999844001529 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 26684 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_4_23_-2.52115559860299_3.32438470141966_3.50999844001529-5 chr8 44998285 44998522 + 3.50999844001529 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 48195 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-7 chr19 38608868 38609207 + 3.50999844001529 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 84840 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding unique_peak2_4_23_-2.52115559860299_3.32438470141966_3.50999844001529-4 chr7 110701546 110701754 + 3.50999844001529 NA Intergenic Intergenic -66556 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-8 chr2 30876023 30876555 + 3.50999844001529 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 27008 NM_022415 64292 Mm.28768 NM_022415 ENSMUSG00000050737 Ptges 2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1 prostaglandin E synthase protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-17 chr8 25495918 25496168 + 3.50999844001529 NA Intergenic Intergenic -22716 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-9 chr2 125282774 125283236 + 3.50999844001529 NA Intergenic Intergenic 35490 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-5 chr14 116926648 116926941 + 3.50999844001529 NA intron (NM_011821, intron 1 of 8) CpG 1497 NM_011821 23888 Mm.440025 NM_011821 ENSMUSG00000058571 Gpc6 - glypican 6 protein-coding unique_peak2_4_23_-2.52115559860299_3.32438470141966_3.50999844001529-6 chr8 82453338 82453603 + 3.50999844001529 NA Intergenic Intergenic -50884 NM_008357 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_4_23_-2.52115559860299_3.32438470141966_3.50999844001529-2 chr2 70261984 70262216 + 3.50999844001529 NA intron (NM_177376, intron 23 of 34) intron (NM_177376, intron 23 of 34) -212823 NM_022435 64406 Mm.423397 NM_022435 ENSMUSG00000075304 Sp5 - trans-acting transcription factor 5 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-12 chr3 96601807 96602286 + 3.50999844001529 NA intron (NM_001163170, intron 1 of 5) intron (NM_001163170, intron 1 of 5) 913 NM_001163170 280411 Mm.482147 NM_001163170 ENSMUSG00000049288 Lix1l D130027M04Rik Lix1-like protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-6 chr15 36631647 36631903 + 3.50999844001529 NA Intergenic Intergenic -22802 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-15 chr3 144637756 144638129 + 3.50999844001529 NA Intergenic Intergenic 67515 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-10 chr2 156864103 156864440 + 3.50999844001529 NA intron (NM_026124, intron 1 of 3) intron (NM_026124, intron 1 of 3) 1149 NM_026124 67388 Mm.29264 NM_026124 ENSMUSG00000027637 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-14 chr3 116205166 116205807 + 3.50999844001529 NA Intergenic Intergenic 47998 NM_022427 64378 Mm.40025 NM_022427 ENSMUSG00000068696 Gpr88 AW061286|Strg G-protein coupled receptor 88 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-3 chr11 19969823 19970307 + 3.50999844001529 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 45623 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-11 chr2 164748191 164748493 + 3.50999844001529 NA intron (NM_133763, intron 3 of 12) intron (NM_133763, intron 3 of 12) 2327 NM_133763 76233 Mm.440009 NM_133763 ENSMUSG00000017299 Dnttip1 6430706C13Rik deoxynucleotidyltransferase, terminal, interacting protein 1 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529 chr1 36073563 36073842 + 3.50999844001529 NA intron (NM_015818, intron 1 of 1) intron (NM_015818, intron 1 of 1) 5302 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-4 chr12 85498070 85498374 + 3.50999844001529 NA Intergenic Intergenic 24332 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-2 chr10 76307191 76307465 + 3.50999844001529 NA intron (NM_001081419, intron 6 of 37) intron (NM_001081419, intron 6 of 37) 37963 NM_001081419 64451 Mm.33183 NM_001081419 ENSMUSG00000020231 Dip2a 4931420H10Rik|AI426328|Dip2|Kiaa0184-hp|mKIAA0184 disco interacting protein 2 homolog A protein-coding unique_peak1_27_4_2.20977099890456_3.42681359433964_3.50999844001529-13 chr3 102371183 102371588 + 3.50999844001529 NA Intergenic C-rich|Low_complexity|Low_complexity -98534 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak2_4_23_-2.52115559860299_3.32438470141966_3.50999844001529 chr13 70713702 70714012 + 3.50999844001529 NA Intergenic Intergenic -76223 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak2_4_23_-2.52115559860299_3.32438470141966_3.50999844001529-3 chr7 43433439 43433819 + 3.50999844001529 NA exon (NM_177693, exon 3 of 5) exon (NM_177693, exon 3 of 5) -3509 NM_024253 72310 Mm.34613 NM_024253 ENSMUSG00000004612 Nkg7 2500004F03Rik natural killer cell group 7 sequence protein-coding common_peak2_48_82_-1.04168128798087_5.85419878735649_3.50592567293368 chr12 10491880 10492686 + 3.50592567293368 NA intron (NR_110487, intron 9 of 11) intron (NR_110487, intron 9 of 11) 45895 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA common_peak2_48_82_-1.04168128798087_5.85419878735649_3.50592567293368-2 chr18 36454005 36454783 + 3.50592567293368 NA intron (NM_026027, intron 1 of 3) intron (NM_026027, intron 1 of 3) 101 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_135_61_0.841524587803089_6.37495860428842_3.50326696274615 chr2 174076028 174077509 + 3.50326696274615 NA promoter-TSS (NM_172675) promoter-TSS (NM_172675) -283 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding common_peak2_60_96_-0.952756772884252_6.123534455745_3.50243100667692 chr11 100938760 100939464 + 3.50243100667692 NA intron (NM_213660, intron 1 of 23) intron (NM_213660, intron 1 of 23) 428 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_141_182_-0.658134076150555_7.18663280020877_3.50164137241237 chr1 55052838 55054084 + 3.50164137241237 NA intron (NM_026424, intron 1 of 3) intron (NM_026424, intron 1 of 3) 691 NM_001039710 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding common_peak2_77_115_-0.858662198018248_6.42864989611845_3.50047664974984 chr10 81105361 81106330 + 3.50047664974984 NA promoter-TSS (NM_001347144) promoter-TSS (NM_001347144) -70 NM_023138 26396 Mm.275436 NM_023138 ENSMUSG00000035027 Map2k2 AA589381|MEK2|MK2|Prkmk2 mitogen-activated protein kinase kinase 2 protein-coding common_peak2_23_52_-1.41704480811795_5.01939805050422_3.50002372270847 chr15 55043766 55044553 + 3.50002372270847 NA intron (NM_001081288, intron 16 of 25) intron (NM_001081288, intron 16 of 25) 27993 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-7 chr15 102985707 102985975 + 3.49799507885145 NA Intergenic Intergenic -4698 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-3 chr11 88451010 88451326 + 3.49799507885145 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 98395 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-8 chr4 123916488 123916706 + 3.49799507885145 NA promoter-TSS (NM_017475) promoter-TSS (NM_017475) -836 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-4 chr13 34075551 34075840 + 3.49799507885145 NA intron (NM_009450, intron 3 of 3) intron (NM_009450, intron 3 of 3) 2313 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-11 chr6 31103545 31103784 + 3.49799507885145 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -40571 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145 chr1 139263367 139263904 + 3.49799507885145 NA intron (NM_133239, intron 5 of 11) intron (NM_133239, intron 5 of 11) 113441 NM_133239 170788 Mm.95700 NM_133239 ENSMUSG00000063681 Crb1 7530426H14Rik|A930008G09Rik crumbs family member 1, photoreceptor morphogenesis associated protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-12 chr9 61963575 61963895 + 3.49799507885145 NA exon (NM_028748, exon 6 of 8) exon (NM_028748, exon 6 of 8) -16936 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-5 chr13 37910395 37910751 + 3.49799507885145 NA intron (NM_001039188, intron 6 of 9) intron (NM_001039188, intron 6 of 9) 21702 NM_001177869 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-6 chr14 45429586 45429992 + 3.49799507885145 NA Intergenic Intergenic -40993 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-2 chr11 83903870 83904186 + 3.49799507885145 NA intron (NM_009330, intron 8 of 8) intron (NM_009330, intron 8 of 8) -38062 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-10 chr5 36620857 36621138 + 3.49799507885145 NA intron (NM_001081232, intron 3 of 8) intron (NM_001081232, intron 3 of 8) -34771 NM_001113362 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding unique_peak1_21_2_2.60126788144915_2.88559644144573_3.49799507885145-9 chr4 152354634 152354858 + 3.49799507885145 NA intron (NM_001081376, intron 3 of 41) intron (NM_001081376, intron 3 of 41) 16095 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding unique_peak2_1_18_-3.49672253050606_2.49956624819056_3.49799507885145 chr10 17260129 17260517 + 3.49799507885145 NA Intergenic MIRb|SINE|MIR -164541 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_41_10_1.65310307738208_4.28598315732834_3.49519823291232 chr11 102895254 102895826 + 3.49519823291232 NA exon (NM_010277, exon 3 of 9) exon (NM_010277, exon 3 of 9) 1660 NM_001131020 14580 Mm.1239 NM_010277 ENSMUSG00000020932 Gfap AI836096 glial fibrillary acidic protein protein-coding unique_peak1_41_10_1.65310307738208_4.28598315732834_3.49519823291232-3 chr14 120377651 120378323 + 3.49519823291232 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 71535 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak1_42_10_1.68681091157213_4.30283707442336_3.49519823291232 chr13 37896442 37897001 + 3.49519823291232 NA intron (NR_033218, intron 4 of 11) intron (NR_033218, intron 4 of 11) 7850 NM_001177869 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak1_42_10_1.68681091157213_4.30283707442336_3.49519823291232-2 chr2 120133422 120134068 + 3.49519823291232 NA intron (NM_133838, intron 2 of 5) MIR3|SINE|MIR 20830 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_41_10_1.65310307738208_4.28598315732834_3.49519823291232-4 chr14 121920747 121921634 + 3.49519823291232 NA intron (NM_026861, intron 4 of 8) intron (NM_026861, intron 4 of 8) -5416 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding unique_peak1_41_10_1.65310307738208_4.28598315732834_3.49519823291232-2 chr13 96541762 96542461 + 3.49519823291232 NA promoter-TSS (NM_001164222) promoter-TSS (NM_001164222) 468 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding common_peak2_305_342_-0.46467266352794_8.18972843440884_3.49212193029147 chr7 112202418 112205345 + 3.49212193029147 NA Intergenic MTEa|LTR|ERVL-MaLR -21955 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_450_476_-0.384805509599053_8.70544270120599_3.49162890459594 chr13 55509951 55513379 + 3.49162890459594 NA intron (NM_001114088, intron 2 of 12) intron (NM_001114088, intron 2 of 12) 1781 NM_026131 67399 Mm.275648 NM_026131 ENSMUSG00000021493 Pdlim7 LMP PDZ and LIM domain 7 protein-coding common_peak2_97_136_-0.771728919167716_6.71216762337667_3.48998930818782 chr6 125482423 125483634 + 3.48998930818782 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 11732 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_96_38_1.02620833554883_5.79850638663666_3.48811054743252 chr6 29609077 29609844 + 3.48811054743252 NA exon (NM_001347079, exon 1 of 23) exon (NM_001347079, exon 1 of 23) 389 NM_177296 320938 Mm.276381 NM_177296 ENSMUSG00000012535 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|Trn-SR|mKIAA4133 transportin 3 protein-coding common_peak1_121_53_0.885213587566164_6.19749429594655_3.48745150600233 chr16 96361469 96362967 + 3.48745150600233 NA intron (NM_028078, intron 1 of 7) intron (NM_028078, intron 1 of 7) 454 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak2_184_225_-0.583671281750356_7.52834332154001_3.48426428884553 chr2 117651051 117653636 + 3.48426428884553 NA Intergenic Intergenic 160459 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_16_42_-1.6093789177924_4.6215752958059_3.48244293670685 chr13 60173863 60174437 + 3.48244293670685 NA TTS (NM_008086) TTS (NM_008086) 3385 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding unique_peak1_50_14_1.48377586395539_4.64877852758621_3.48244293670685-2 chr7 29815742 29816376 + 3.48244293670685 NA promoter-TSS (NM_001145880) promoter-TSS (NM_001145880) -13 NM_146185 233056 Mm.224766 NM_146185 ENSMUSG00000011427 Zfp790 6330581L23Rik zinc finger protein 790 protein-coding unique_peak1_50_14_1.48377586395539_4.64877852758621_3.48244293670685 chr3 21935133 21935918 + 3.48244293670685 NA Intergenic Intergenic -141127 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_161_77_0.760925254692121_6.66586484620831_3.48127004967904 chr13 28531278 28532709 + 3.48127004967904 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 178880 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_218_113_0.645306044055395_7.15554303619244_3.48052346359294 chr3 126595949 126597668 + 3.48052346359294 NA promoter-TSS (NM_001293665) promoter-TSS (NM_001293665) -143 NM_001346636 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_56_17_1.38007405533029_4.85996202910746_3.47766236959939 chr3 27654125 27654694 + 3.47766236959939 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 56043 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak2_20_47_-1.46537282512853_4.85227608815689_3.47766236959938 chr15 75216524 75217309 + 3.47766236959938 NA Intergenic Intergenic -51505 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding common_peak1_126_56_0.864749607409174_6.26526481786933_3.47662887637343 chr15 50887731 50889102 + 3.47662887637343 NA TTS (NR_035444) TTS (NR_035444) 633 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e transcriptional repressor GATA binding 1 protein-coding common_peak1_66_22_1.25799106158337_5.1525574868487_3.47380072378139 chr11 94328031 94328562 + 3.47380072378139 NA exon (NM_146024, exon 1 of 5) exon (NM_146024, exon 1 of 5) 295 NM_146024 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak2_26_55_-1.3277530915842_5.1434783762655_3.47380072378137 chr7 139283675 139284064 + 3.47380072378137 NA Intergenic Intergenic 35387 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_92_36_1.04183177615129_5.73036925370459_3.47269401193204 chr4 41568251 41569416 + 3.47269401193204 NA promoter-TSS (NM_175138) promoter-TSS (NM_175138) 694 NM_001159583 71901 Mm.39215 NM_027993 ENSMUSG00000028439 Fam219a 2310028H24Rik family with sequence similarity 219, member A protein-coding common_peak2_316_351_-0.451447788132336_8.23370772457113_3.46950173718855 chr8 111725546 111728565 + 3.46950173718855 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 5081 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_71_108_-0.883528055677465_6.32642029693819_3.46942286937952 chr13 42052062 42053199 + 3.46942286937952 NA intron (NM_007772, intron 1 of 8) CpG 609 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_86_124_-0.810035661057366_6.5607664541334_3.46876165362081 chr17 15009451 15010815 + 3.46876165362081 NA promoter-TSS (NM_001123367).2 promoter-TSS (NM_001123367).2 51 NM_001123367 100041639 Mm.440445 NM_001123367 ENSMUSG00000079710 Gm3448 - predicted gene 3448 protein-coding common_peak2_124_164_-0.691421432912873_7.02061149778938_3.46810209795719 chr17 23997847 24000153 + 3.46810209795719 NA promoter-TSS (NM_133731) promoter-TSS (NM_133731) -900 NM_133731 70835 Mm.157351 NM_133731 ENSMUSG00000045027 Prss22 4733401N09Rik|BSSP-4|SP001LA protease, serine 22 protein-coding common_peak2_124_164_-0.691421432912873_7.02061149778938_3.46810209795719-2 chr8 120907903 120909816 + 3.46810209795719 NA Intergenic Intergenic 170220 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_174_215_-0.597984570010274_7.45589521715833_3.46696714422108 chr8 110792848 110795064 + 3.46696714422108 NA intron (NM_029646, intron 1 of 7) ID_B1|SINE|B4 11968 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak2_10_33_-1.89417747950679_4.14037410149694_3.46696221776358 chr10 43605131 43605588 + 3.46696221776358 NA intron (NR_033558, intron 2 of 2) intron (NR_033558, intron 2 of 2) 11932 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA unique_peak1_39_9_1.72071386851107_4.1822850291429_3.46696221776358 chr4 155849430 155849847 + 3.46696221776358 NA intron (NM_001356381, intron 1 of 15) intron (NM_001356381, intron 1 of 15) 2236 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak1_39_9_1.72071386851107_4.1822850291429_3.46696221776358 chr4 141239564 141239858 + 3.46696221776358 NA Intergenic Intergenic -3173 NM_172520 213649 Mm.134460 NM_172520 ENSMUSG00000028919 Arhgef19 6030432F23|6430573B13Rik|WGEF Rho guanine nucleotide exchange factor (GEF) 19 protein-coding unique_peak1_29_5_2.04557004447797_3.60774752296014_3.46164246247458-5 chr7 139781917 139782233 + 3.46164246247458 NA Intergenic Intergenic 3057 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_29_5_2.04557004447797_3.60774752296014_3.46164246247458 chr13 40718771 40719051 + 3.46164246247458 NA intron (NM_001122948, intron 6 of 6) intron (NM_001122948, intron 6 of 6) -8897 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA unique_peak1_29_5_2.04557004447797_3.60774752296014_3.46164246247458-2 chr14 55716308 55716743 + 3.46164246247458 NA exon (NM_019519, exon 16 of 16) exon (NM_019519, exon 16 of 16) -3033 NM_001161715 21816 Mm.41964 NM_019984 ENSMUSG00000022218 Tgm1 2310004J08Rik|Tgase1 transglutaminase 1, K polypeptide protein-coding unique_peak1_29_5_2.04557004447797_3.60774752296014_3.46164246247458-3 chr3 38459984 38460350 + 3.46164246247458 NA intron (NM_001167883, intron 3 of 3) intron (NM_001167883, intron 3 of 3) 24649 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding unique_peak1_29_5_2.04557004447797_3.60774752296014_3.46164246247458-4 chr6 113061741 113062045 + 3.46164246247458 NA intron (NM_008188, intron 5 of 9) B1_Mur2|SINE|Alu 15351 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak2_40_73_-1.13143881845527_5.64373395640132_3.4600272876225 chr2 51278088 51279385 + 3.4600272876225 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 36905 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA unique_peak1_70_24_1.22076455193201_5.25423846574073_3.45664717237458 chr14 76534274 76535255 + 3.45664717237458 NA intron (NM_001360048, intron 2 of 2) intron (NM_001360048, intron 2 of 2) -13909 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_178_88_0.71354414137011_6.83250550165145_3.45553044080475 chr12 112595800 112598296 + 3.45553044080475 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 8264 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_100_41_0.977180476478653_5.88090766101809_3.45208029060379 chr14 46821473 46822148 + 3.45208029060379 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 432 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak1_84_32_1.07803865715863_5.58341344793777_3.45053414090947 chr3 95226741 95227755 + 3.45053414090947 NA TTS (NR_108026) TTS (NR_108026) -1176 NM_172395 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding unique_peak1_85_32_1.09479343127774_5.59179083499732_3.45053414090947 chr11 76477515 76478599 + 3.45053414090947 NA intron (NM_001346670, intron 3 of 21) intron (NM_001346670, intron 3 of 21) -9592 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak2_31_61_-1.23121124574232_5.33859068751571_3.44689162350862 chr1 131733272 131734421 + 3.44689162350862 NA Intergenic Intergenic -10176 NM_177243 320718 Mm.482704 NM_177243 ENSMUSG00000042268 Slc26a9 E030002L01Rik solute carrier family 26, member 9 protein-coding unique_peak2_30_61_-1.27669179126085_5.31585041475645_3.44689162350862 chr15 73164037 73165122 + 3.44689162350862 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 20368 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding unique_peak1_73_26_1.16901825932073_5.33939663182383_3.44689162350861-2 chr6 116107041 116107867 + 3.44689162350861 NA intron (NM_177412, intron 3 of 5) intron (NM_177412, intron 3 of 5) 85920 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak1_73_26_1.16901825932073_5.33939663182383_3.44689162350861 chr14 70075289 70076039 + 3.44689162350861 NA Intergenic CpG -1781 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_73_26_1.16901825932073_5.33939663182383_3.44689162350861 chr14 62761516 62762343 + 3.44689162350861 NA promoter-TSS (NM_008715) promoter-TSS (NM_008715) -817 NM_008715 18130 Mm.319684 NM_008715 ENSMUSG00000035161 Ints6 2900075H24Rik|AI480962|DICE1|Ddx26|HDB|Notch2l integrator complex subunit 6 protein-coding unique_peak1_37_8_1.79923845310284_4.06954422799373_3.44661255732379-4 chr5 122166523 122166922 + 3.44661255732379 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 8443 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding unique_peak1_37_8_1.79923845310284_4.06954422799373_3.44661255732379 chr1 133834100 133834413 + 3.44661255732379 NA Intergenic Intergenic 72917 NM_054076 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding unique_peak1_37_8_1.79923845310284_4.06954422799373_3.44661255732379-5 chr7 99974030 99974629 + 3.44661255732379 NA intron (NM_175388, intron 1 of 5) intron (NM_175388, intron 1 of 5) 6129 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding unique_peak1_36_8_1.76103573961513_4.05044287124988_3.44661255732379-2 chr8 114674189 114674616 + 3.44661255732379 NA intron (NM_019573, intron 5 of 8) intron (NM_019573, intron 5 of 8) 234750 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding unique_peak1_36_8_1.76103573961513_4.05044287124988_3.44661255732379-3 chr9 71316444 71316971 + 3.44661255732379 NA Intergenic Intergenic 100918 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding unique_peak1_37_8_1.79923845310284_4.06954422799373_3.44661255732379-2 chr4 57735836 57736289 + 3.44661255732379 NA intron (NM_001304544, intron 5 of 8) intron (NM_001304544, intron 5 of 8) -109186 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_37_8_1.79923845310284_4.06954422799373_3.44661255732379-3 chr4 145200234 145200593 + 3.44661255732379 NA Intergenic Intergenic -5408 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding unique_peak1_36_8_1.76103573961513_4.05044287124988_3.44661255732379 chr6 28862069 28862369 + 3.44661255732379 NA intron (NM_019776, intron 16 of 23) intron (NM_019776, intron 16 of 23) -30472 NM_138682 192198 Mm.443660 NM_138682 ENSMUSG00000049939 Lrrc4 MBAG1|NGL-2|NGL2|NLG-2|Nag14 leucine rich repeat containing 4 protein-coding common_peak1_36_8_1.76103573961513_4.05044287124988_3.44661255732379 chr15 13369958 13370289 + 3.44661255732379 NA Intergenic Intergenic -196448 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_35_67_-1.19575159257763_5.48958704496152_3.44473077378963 chr1 191574366 191575469 + 3.44473077378963 NA promoter-TSS (NM_001306203) promoter-TSS (NM_001306203) 627 NM_029766 76843 Mm.189102 NM_029766 ENSMUSG00000037474 Dtl 2810047L02Rik|5730564G15Rik|L2dtl|Ramp denticleless E3 ubiquitin protein ligase protein-coding common_peak1_81_30_1.11676325721356_5.51257793899366_3.44473077378963 chr9 32713715 32714624 + 3.44473077378963 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 18127 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_35_67_-1.19575159257763_5.48958704496152_3.44473077378963 chr19 53404627 53405074 + 3.44473077378963 NA Intergenic Intergenic -14216 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_77_28_1.14133780198175_5.42864989611845_3.44325269351006 chr3 116113654 116114631 + 3.44325269351006 NA intron (NM_011693, intron 8 of 8) intron (NM_011693, intron 8 of 8) 15546 NM_011693 22329 Mm.76649 NM_011693 ENSMUSG00000027962 Vcam1 CD106|Vcam-1 vascular cell adhesion molecule 1 protein-coding common_peak2_77_28_1.14133780198175_5.42864989611845_3.44325269351006 chr14 73384736 73385206 + 3.44325269351006 NA intron (NM_008410, intron 1 of 5) CpG 318 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak1_111_151_-0.730338378798149_6.88275832404451_3.44299361468124 chr2 168205848 168207364 + 3.44299361468124 NA 5' UTR (NM_009628, exon 1 of 4) 5' UTR (NM_009628, exon 1 of 4) 506 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding common_peak1_173_85_0.72242888932938_6.78747919936679_3.44252301665772 chr11 98937591 98939153 + 3.44252301665772 NA intron (NM_009024, intron 1 of 8) intron (NM_009024, intron 1 of 8) 654 NM_001177302 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_32_6_1.95971106234015_3.78721045322768_3.43978897119959-3 chr6 4086552 4086923 + 3.43978897119959 NA intron (NM_009748, intron 1 of 3) intron (NM_009748, intron 1 of 3) 193 NM_009748 12068 Mm.286457 NM_009748 ENSMUSG00000032757 Bet1 AW555236|Bet-1 Bet1 golgi vesicular membrane trafficking protein protein-coding unique_peak1_32_6_1.95971106234015_3.78721045322768_3.43978897119959 chr12 113097870 113098226 + 3.43978897119959 NA promoter-TSS (NM_054081) promoter-TSS (NM_054081) -230 NM_001346696 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding unique_peak2_6_27_-2.26154586911919_3.67658198749801_3.43978897119959-2 chr13 117025604 117026169 + 3.43978897119959 NA promoter-TSS (NM_001081009) promoter-TSS (NM_001081009) -370 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding unique_peak2_6_27_-2.26154586911919_3.67658198749801_3.43978897119959-3 chr15 38692109 38692549 + 3.43978897119959 NA 3' UTR (NM_025494, exon 13 of 13) 3' UTR (NM_025494, exon 13 of 13) 30425 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding unique_peak2_6_27_-2.26154586911919_3.67658198749801_3.43978897119959 chr12 79545377 79545850 + 3.43978897119959 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 248262 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_32_6_1.95971106234015_3.78721045322768_3.43978897119959-2 chr2 172347965 172348599 + 3.43978897119959 NA intron (NM_025912, intron 1 of 2) intron (NM_025912, intron 1 of 2) 2705 NM_025912 67017 Mm.30013 NM_025912 ENSMUSG00000027495 Fam210b 2010011I20Rik|AI430961|AV108736 family with sequence similarity 210, member B protein-coding unique_peak1_34_7_1.8513559925458_3.9256779962729_3.43644803111449-2 chr8 14351317 14351918 + 3.43644803111449 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 255742 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak2_7_29_-2.16979557181748_3.82199280969978_3.43644803111449-2 chr8 79995714 79996201 + 3.43644803111449 NA intron (NM_020259, intron 7 of 12) intron (NM_020259, intron 7 of 12) 62051 NM_020259 15245 Mm.254493 NM_020259 ENSMUSG00000064325 Hhip Hhip1 Hedgehog-interacting protein protein-coding unique_peak2_8_29_-2.00106938778933_3.90635590171386_3.43644803111449-3 chr7 49316449 49317043 + 3.43644803111449 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 70557 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak2_7_29_-2.16979557181748_3.82199280969978_3.43644803111449 chr4 45497916 45498381 + 3.43644803111449 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 32680 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak2_8_29_-2.00106938778933_3.90635590171386_3.43644803111449 chr12 77079496 77080226 + 3.43644803111449 NA Intergenic Intergenic -117613 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak1_34_7_1.8513559925458_3.9256779962729_3.43644803111449 chr17 87762746 87763163 + 3.43644803111449 NA intron (NM_199251, intron 1 of 1) intron (NM_199251, intron 1 of 1) 35040 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak2_8_29_-2.00106938778933_3.90635590171386_3.43644803111449-2 chr13 24620420 24621303 + 3.43644803111449 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) 6255 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak2_60_19_1.32522797441551_4.98454208209512_3.43633107051274 chr13 12813290 12813641 + 3.43633107051274 NA Intergenic Intergenic -13386 NM_011118 18812 Mm.457984 NM_011118 ENSMUSG00000056457 Prl2c3 Ghd1|MRP-2|MRP-3|Mrpplf3|PLF-2|PLF-3|Plf2|Prl2c4|mrp/plf3 prolactin family 2, subfamily c, member 3 protein-coding unique_peak1_60_19_1.32522797441551_4.98454208209512_3.43633107051274 chr11 121651240 121651905 + 3.43633107051274 NA intron (NM_178664, intron 4 of 12) intron (NM_178664, intron 4 of 12) 21579 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding unique_peak2_22_50_-1.422517060602_4.9611668116705_3.43633107051274 chr1 43149657 43150537 + 3.43633107051274 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 13864 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_60_19_1.32522797441551_4.98454208209512_3.43633107051274-2 chr19 4793061 4793848 + 3.43633107051274 NA intron (NM_001290127, intron 1 of 3) intron (NM_001290127, intron 1 of 3) 447 NM_009032 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding unique_peak1_60_19_1.32522797441551_4.98454208209512_3.43633107051274-3 chr9 9240582 9241284 + 3.43633107051274 NA intron (NR_045754, intron 2 of 3) intron (NR_045754, intron 2 of 3) -1920 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding common_peak2_69_105_-0.88361944159064_6.28611073376788_3.43620011299828 chr4 41349011 41349962 + 3.43620011299828 NA intron (NM_001355509, intron 1 of 5) CpG 490 NM_023305 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding common_peak1_128_57_0.862042157736071_6.28900207399561_3.43620011299826 chr3 109164160 109165299 + 3.43620011299826 NA intron (NM_172685, intron 9 of 9) intron (NM_172685, intron 9 of 9) 41580 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_377_220_0.472193381936368_8.02399925035962_3.43411454595145 chr8 117257151 117259612 + 3.43411454595145 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 1362 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_47_13_1.4964657448144_4.55558779446481_3.43266191012053-2 chr16 32660149 32660560 + 3.43266191012053 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 7843 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak1_47_13_1.4964657448144_4.55558779446481_3.43266191012053 chr8 122987332 122988351 + 3.43266191012053 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 54443 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_48_13_1.52600322130845_4.57035653271183_3.43266191012053 chr14 48224456 48225108 + 3.43266191012053 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 26066 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_48_13_1.52600322130845_4.57035653271183_3.43266191012053 chr10 79960222 79960568 + 3.43266191012053 NA intron (NM_175450, intron 1 of 9) CpG 243 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding unique_peak1_48_13_1.52600322130845_4.57035653271183_3.43266191012053 chr6 72277335 72277728 + 3.43266191012053 NA Intergenic Intergenic -27079 NM_001282071 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak1_47_13_1.4964657448144_4.55558779446481_3.43266191012053 chr1 180365114 180365925 + 3.43266191012053 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -34970 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_168_82_0.731886914199018_6.74098288844643_3.43068907968987 chr3 41563055 41564587 + 3.43068907968987 NA promoter-TSS (NM_001130185) promoter-TSS (NM_001130185) 70 NM_001130185 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak2_59_94_-0.946378042705063_6.09666658697842_3.42889217787834 chr5 34335500 34336143 + 3.42889217787834 NA promoter-TSS (NM_011278) promoter-TSS (NM_011278) -429 NM_011278 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak1_163_79_0.741976493139831_6.69291634145728_3.42014673246994 chr19 16956023 16957323 + 3.42014673246994 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 555 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_96_134_-0.765205042639753_6.69421307573095_3.42014673246994 chr15 79741537 79742539 + 3.42014673246994 NA promoter-TSS (NR_045069) promoter-TSS (NR_045069) 498 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding unique_peak1_54_16_1.4113694601006_4.79314757130064_3.4192226378953 chr14 45350965 45351722 + 3.4192226378953 NA 5' UTR (NM_019637, exon 1 of 11) 5' UTR (NM_019637, exon 1 of 11) 157 NM_019637 56291 Mm.202561 NM_019637 ENSMUSG00000053205 Styx 0610039A20Rik|hStyxb serine/threonine/tyrosine interaction protein protein-coding common_peak1_387_227_0.464610581099848_8.06519530471467_3.4173683682991 chr11 75402465 75406039 + 3.4173683682991 NA intron (NM_001102611, intron 10 of 10) intron (NM_001102611, intron 10 of 10) 18371 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_186_93_0.697322384464835_6.90325004391006_3.41682784715027 chr16 23320293 23321682 + 3.41682784715027 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 30517 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_63_21_1.25649846643401_5.0876808518543_3.40732869296046 chr14 75829278 75829987 + 3.40732869296046 NA Intergenic Intergenic 15332 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak2_63_21_1.25649846643401_5.0876808518543_3.40732869296046 chr3 88496660 88497049 + 3.40732869296046 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) -3542 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_64_21_1.27870847499845_5.09878585613652_3.40732869296046 chr15 73434150 73434859 + 3.40732869296046 NA Intergenic Intergenic -11313 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_42_74_-1.08257616028645_5.68753061035266_3.39934005986188 chr8 126833618 126834390 + 3.39934005986188 NA Intergenic Intergenic -15016 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_42_74_-1.08257616028645_5.68753061035266_3.39934005986188 chr15 80069785 80071017 + 3.39934005986188 NA Intergenic Intergenic 8178 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_268_147_0.5633249573444_7.49111584430115_3.39684051229474 chr14 54573187 54575623 + 3.39684051229474 NA intron (NM_010590, intron 1 of 7) intron (NM_010590, intron 1 of 7) 3256 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_186_225_-0.568267726272715_7.53604509927883_3.38994127606291 chr15 103214061 103215954 + 3.38994127606291 NA intron (NM_001358950, intron 1 of 4) intron (NM_001358950, intron 1 of 4) 345 NM_007626 12419 Mm.262059 NM_007626 ENSMUSG00000009575 Cbx5 2610029O15Rik|C75991|HP1|Hp1a|Hp1alpha chromobox 5 protein-coding unique_peak1_45_12_1.54241358365516_4.47164650996867_3.38598118607238 chr4 101356178 101356623 + 3.38598118607238 NA promoter-TSS (NR_040708) promoter-TSS (NR_040708) -152 NR_040708 77866 Mm.137053 NR_040708 ENSMUSG00000086782 E130102H24Rik - RIKEN cDNA E130102H24 gene ncRNA unique_peak2_13_38_-1.74664814549708_4.41207814611371_3.38598118607238 chr11 86807249 86807597 + 3.38598118607238 NA intron (NM_026191, intron 1 of 17) CpG 237 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding unique_peak2_14_38_-1.64781469408988_4.46149487181731_3.38598118607238 chr6 112946592 112947215 + 3.38598118607238 NA 5' UTR (NM_080448, exon 1 of 22) 5' UTR (NM_080448, exon 1 of 22) 363 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak2_13_38_-1.74664814549708_4.41207814611371_3.38598118607238-2 chr2 121457051 121457721 + 3.38598118607238 NA promoter-TSS (NM_001025371) promoter-TSS (NM_001025371) 298 NM_026318 67693 Mm.330525 NM_026318 ENSMUSG00000027245 Hypk 2310003F16Rik|HSPC136 huntingtin interacting protein K protein-coding common_peak1_115_50_0.895432699832527_6.12014169188776_3.3842617621114-2 chr3 52762848 52764286 + 3.3842617621114 NA intron (NR_038079, intron 1 of 3) intron (NR_038079, intron 1 of 3) 23843 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_115_50_0.895432699832527_6.12014169188776_3.3842617621114 chr16 33829221 33830518 + 3.3842617621114 NA 5' UTR (NM_010580, exon 1 of 15) 5' UTR (NM_010580, exon 1 of 15) 204 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_48_81_-1.02419386125203_5.84545507399207_3.37831584500436 chr8 27107114 27107780 + 3.37831584500436 NA intron (NM_054044, intron 2 of 18) intron (NM_054044, intron 2 of 18) 21185 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak1_47_81_-1.05373133774608_5.83068633574504_3.37831584500436 chr8 27107122 27107770 + 3.37831584500436 NA intron (NM_054044, intron 2 of 18) intron (NM_054044, intron 2 of 18) 21186 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak2_36_68_-1.17756371572073_5.51974259891781_3.37793387412722 chr13 100103622 100104117 + 3.37793387412722 NA 5' UTR (NM_001081061, exon 1 of 39) 5' UTR (NM_001081061, exon 1 of 39) 201 NM_001081061 544971 Mm.288546 NM_001081061 ENSMUSG00000049658 Bdp1 AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB protein-coding unique_peak1_71_25_1.18421655095837_5.29254799362028_3.37685850592781 chr8 13695657 13696415 + 3.37685850592781 NA Intergenic Intergenic -9853 NM_001101519 403185 Mm.252143 NM_001101519 ENSMUSG00000090336 4932443I19Rik A230061C02Rik|Gm1106 RIKEN cDNA 4932443I19 gene protein-coding common_peak1_107_45_0.941929915269902_5.99452691369196_3.37478943945637 chr11 96299100 96300653 + 3.37478943945637 NA intron (NM_008269, intron 1 of 1) intron (NM_008269, intron 1 of 1) 802 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_57_18_1.32698550793368_4.91142026741043_3.37359444961112 chr5 151233422 151233932 + 3.37359444961112 NA Intergenic CpG -43484 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_57_18_1.32698550793368_4.91142026741043_3.37359444961112 chr14 46634965 46635434 + 3.37359444961112 NA intron (NR_046460, intron 1 of 4) intron (NR_046460, intron 1 of 4) 2224 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA unique_peak1_78_29_1.11067707066676_5.4622291309419_3.37274147056187 chr7 139833072 139834097 + 3.37274147056187 NA promoter-TSS (NM_177469) promoter-TSS (NM_177469) -590 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding common_peak1_78_29_1.11067707066676_5.4622291309419_3.37274147056187 chr5 92750680 92751640 + 3.37274147056187 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 37402 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak2_134_173_-0.657794725767934_7.11404613296476_3.37212872388289 chr7 121033981 121035721 + 3.37212872388289 NA exon (NM_021554, exon 1 of 5) exon (NM_021554, exon 1 of 5) 406 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding unique_peak1_75_27_1.1547535529143_5.38473169851475_3.37209539954548 chr1 64035859 64036670 + 3.37209539954548 NA intron (NM_033563, intron 3 of 3) intron (NM_033563, intron 3 of 3) 6237 NR_105864 102466760 NR_105864 ENSMUSG00000098487 Mir6899 Gm27384|mmu-mir-6899 microRNA 6899 ncRNA common_peak1_74_27_1.13577954232216_5.37524469321868_3.37209539954548 chr4 97778183 97778911 + 3.37209539954548 NA intron (NM_010905, intron 1 of 10) CpG 921 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak2_63_99_-0.927926104703417_6.17989313742302_3.37186932298294 chr11 3291536 3292911 + 3.37186932298294 NA intron (NM_019574, intron 1 of 3) intron (NM_019574, intron 1 of 3) 1766 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-4 chr10 62649984 62650191 + 3.36932189928148 NA promoter-TSS (NM_001358820) promoter-TSS (NM_001358820) -334 NM_001358820 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-34 chr7 28162926 28163195 + 3.36932189928148 NA intron (NM_001164655, intron 18 of 19) intron (NM_001164655, intron 18 of 19) -6688 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-17 chr15 98144428 98144680 + 3.36932189928148 NA intron (NM_001170711, intron 1 of 3) intron (NM_001170711, intron 1 of 3) 1148 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-27 chr4 151863096 151863344 + 3.36932189928148 NA Intergenic Intergenic -1452 NM_001195565 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-15 chr14 70077230 70077581 + 3.36932189928148 NA promoter-TSS (NM_001289925) promoter-TSS (NM_001289925) -40 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-36 chr8 120019601 120019909 + 3.36932189928148 NA intron (NM_030209, intron 6 of 14) intron (NM_030209, intron 6 of 14) 27317 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-32 chr6 114864264 114864528 + 3.36932189928148 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 57425 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-39 chr9 123225338 123225532 + 3.36932189928148 NA Intergenic Intergenic -9397 NM_133974 109332 Mm.27519 NM_133974 ENSMUSG00000035498 Cdcp1 9030022E12Rik|AA409659|E030027H19Rik CUB domain containing protein 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-28 chr5 35939888 35940156 + 3.36932189928148 NA intron (NM_027373, intron 3 of 16) intron (NM_027373, intron 3 of 16) 46703 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-7 chr11 95095858 95096141 + 3.36932189928148 NA Intergenic Intergenic -19188 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-35 chr7 143011609 143011841 + 3.36932189928148 NA intron (NM_001128082, intron 3 of 5) intron (NM_001128082, intron 3 of 5) 6066 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-21 chr2 125894202 125894747 + 3.36932189928148 NA intron (NM_175154, intron 4 of 9) intron (NM_175154, intron 4 of 9) 28251 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-25 chr3 38992937 38993153 + 3.36932189928148 NA intron (NM_183221, intron 10 of 16) intron (NM_183221, intron 10 of 16) 106105 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-33 chr6 116670042 116670258 + 3.36932189928148 NA intron (NM_178045, intron 1 of 10) intron (NM_178045, intron 1 of 10) 3686 NM_178045 213391 Mm.257931 NM_178045 ENSMUSG00000042129 Rassf4 3830411C14Rik|AD037|AI586137 Ras association (RalGDS/AF-6) domain family member 4 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-3 chr1 180355933 180356220 + 3.36932189928148 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -25527 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_0_13_-4.04909495954683_1.78280744228419_3.36932189928148-3 chr15 32016459 32016662 + 3.36932189928148 NA Intergenic Intergenic -160729 NM_020503 57254 Mm.377133 NM_020503 ENSMUSG00000045267 Tas2r119 T2r19|Tas2r19|mGR19|mt2r19 taste receptor, type 2, member 119 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-6 chr10 81269270 81269548 + 3.36932189928148 NA exon (NM_018758, exon 2 of 11) exon (NM_018758, exon 2 of 11) 1237 NM_018758 57267 Mm.293931 NM_018758 ENSMUSG00000004931 Apba3 AW208791|Mint-3|X11gamma|lin-10|mint3 amyloid beta (A4) precursor protein-binding, family A, member 3 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-13 chr13 107962839 107963181 + 3.36932189928148 NA Intergenic ID_B1|SINE|B4 -72946 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-30 chr6 91367515 91367857 + 3.36932189928148 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 43683 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-5 chr10 67486676 67486937 + 3.36932189928148 NA Intergenic Intergenic -51063 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-12 chr13 91915638 91915895 + 3.36932189928148 NA intron (NM_009027, intron 6 of 14) intron (NM_009027, intron 6 of 14) -38881 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-9 chr12 99360312 99360503 + 3.36932189928148 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 89667 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak2_0_13_-4.04909495954683_1.78280744228419_3.36932189928148 chr1 134770759 134770968 + 3.36932189928148 NA intron (NM_001081307, intron 23 of 23) intron (NM_001081307, intron 23 of 23) 32858 NR_015606 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-26 chr4 100216355 100216667 + 3.36932189928148 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 120720 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-31 chr6 108119976 108120203 + 3.36932189928148 NA intron (NM_145937, intron 7 of 8) intron (NM_145937, intron 7 of 8) 55044 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-18 chr17 75359395 75359610 + 3.36932189928148 NA intron (NM_019919, intron 27 of 33) intron (NM_019919, intron 27 of 33) -76403 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-38 chr9 78281184 78281494 + 3.36932189928148 NA Intergenic Intergenic -8589 NM_001122660 100042314 Mm.482247 NM_001122660 ENSMUSG00000074179 Gm10639 - predicted gene 10639 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-23 chr2 178077448 178077676 + 3.36932189928148 NA intron (NM_001162922, intron 1 of 3) intron (NM_001162922, intron 1 of 3) 863 NM_001162922 353208 Mm.381194 NM_001162922 ENSMUSG00000078861 Zfp931 2810021G02Rik zinc finger protein 931 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-11 chr13 42836544 42836861 + 3.36932189928148 NA intron (NM_001005740, intron 1 of 12) intron (NM_001005740, intron 1 of 12) -29545 NM_001302636 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_0_13_-4.04909495954683_1.78280744228419_3.36932189928148-5 chr6 104135973 104136175 + 3.36932189928148 NA Intergenic Intergenic -171390 NR_144494 100846987 NR_144494 Pou5f1-rs5 Gm21054|Oct4P5|Otf3-rs5|Otf3e POU domain, class 5, transcription factor 1, related sequence 5 pseudo unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-20 chr2 84607422 84607681 + 3.36932189928148 NA intron (NM_001355064, intron 16 of 18) intron (NM_001355064, intron 16 of 18) 41929 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-24 chr3 30601629 30601943 + 3.36932189928148 NA promoter-TSS (NM_030557) promoter-TSS (NM_030557) -301 NM_001289623 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-10 chr13 31577230 31577484 + 3.36932189928148 NA intron (NR_029439, intron 3 of 5) intron (NR_029439, intron 3 of 5) 5156 NR_029439 71307 Mm.376184 NR_029439 ENSMUSG00000038408 1700018A04Rik 4930551G20Rik|4933439J11Rik RIKEN cDNA 1700018A04 gene ncRNA unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-8 chr12 33369259 33369470 + 3.36932189928148 NA intron (NR_131031, intron 2 of 3) intron (NR_131031, intron 2 of 3) 25396 NR_131031 75836 Mm.410807 NR_131031 ENSMUSG00000085664 Atxn7l1os2 4930556N08Rik ataxin 7-like 1, opposite strand 2 ncRNA unique_peak2_0_13_-4.04909495954683_1.78280744228419_3.36932189928148-2 chr11 52656513 52656733 + 3.36932189928148 NA Intergenic Intergenic -108083 NM_177059 320027 Mm.44518 NM_177059 ENSMUSG00000036264 Fstl4 B230374F23Rik|SPIG1|mKIAA1061 follistatin-like 4 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-14 chr14 19745178 19745408 + 3.36932189928148 NA Intergenic Intergenic -5964 NM_008695 18074 Mm.20348 NM_008695 ENSMUSG00000021806 Nid2 AW547149|Ly111|NID-2|entactin-2|nidogen-2 nidogen 2 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148 chr1 89467495 89467745 + 3.36932189928148 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 12809 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-29 chr6 54602636 54602953 + 3.36932189928148 NA promoter-TSS (NM_001001335) promoter-TSS (NM_001001335) -353 NM_001001335 231999 Mm.35416 NM_001001335 ENSMUSG00000005225 Plekha8 6330400G01|AA517676|BC052360|Fapp-2|Fapp2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-22 chr2 151985559 151985789 + 3.36932189928148 NA Intergenic Intergenic -5455 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-2 chr1 173914182 173914411 + 3.36932189928148 NA Intergenic Intergenic -1250 NM_001033450 381308 Mm.490248 NM_001033450 ENSMUSG00000026536 Ifi211 A730048F03|Ifi205b|Mnda|ifi-205-B interferon activated gene 211 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-19 chr18 39390158 39390467 + 3.36932189928148 NA Intergenic Intergenic 96933 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_0_13_-4.04909495954683_1.78280744228419_3.36932189928148-4 chr19 44765173 44765383 + 3.36932189928148 NA intron (NM_011037, intron 3 of 9) intron (NM_011037, intron 3 of 9) 7884 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-16 chr14 73386064 73386303 + 3.36932189928148 NA promoter-TSS (NM_008410) promoter-TSS (NM_008410) -894 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding unique_peak1_15_1_2.7300400442178_2.3650200221089_3.36932189928148-37 chr9 69084400 69084769 + 3.36932189928148 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -205257 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak1_299_168_0.528145068951091_7.66495197075773_3.36281216016768 chr18 75454510 75456841 + 3.36281216016768 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -58970 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak2_17_43_-1.56066539039135_4.67909892344162_3.36245859328196 chr1 16215987 16216638 + 3.36245859328196 NA Intergenic Intergenic 110430 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_17_43_-1.56066539039135_4.67909892344162_3.36245859328196 chr4 141287429 141287701 + 3.36245859328196 NA Intergenic Intergenic 9126 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA unique_peak1_51_15_1.41848319488187_4.70924159744093_3.36245859328196 chr15 78805392 78805863 + 3.36245859328196 NA Intergenic Intergenic -2585 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak1_51_15_1.41848319488187_4.70924159744093_3.36245859328196 chr3 122078539 122078945 + 3.36245859328196 NA intron (NM_007378, intron 6 of 49) intron (NM_007378, intron 6 of 49) 34282 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_145_68_0.788835999214514_6.50294245638543_3.35995323223838 chr3 145891293 145892584 + 3.35995323223838 NA 3' UTR (NM_026993, exon 6 of 6) 3' UTR (NM_026993, exon 6 of 6) -32324 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_45_78_-1.06092744638085_5.77331702498668_3.35853842365952 chr11 88536048 88537351 + 3.35853842365952 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -82552 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_2_20_-3.06027683761378_2.86217900397187_3.35694334496952 chr15 77837857 77838108 + 3.35694334496952 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 4193 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_2_20_-3.06027683761378_2.86217900397187_3.35694334496952-2 chr9 109907268 109907531 + 3.35694334496952 NA Intergenic Intergenic 17756 NR_106057 102465660 NR_106057 ENSMUSG00000098490 Mir7089 Gm27418|mmu-mir-7089 microRNA 7089 ncRNA unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952 chr1 135366814 135367030 + 3.35694334496952 NA 3' UTR (NM_053106, exon 3 of 3) 3' UTR (NM_053106, exon 3 of 3) 8141 NM_175259 77552 Mm.41407 NM_175259 ENSMUSG00000041889 Shisa4 9330132O05Rik|Tmem58|mShisa4 shisa family member 4 protein-coding unique_peak2_3_20_-2.64816741941448_3.06823371307152_3.35694334496952-4 chr2 18994386 18994973 + 3.35694334496952 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 3442 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-6 chr15 41733536 41734004 + 3.35694334496952 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -55225 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-5 chr15 25915449 25915730 + 3.35694334496952 NA intron (NM_001034851, intron 3 of 8) intron (NM_001034851, intron 3 of 8) -17963 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak2_3_20_-2.64816741941448_3.06823371307152_3.35694334496952-5 chr5 96623070 96623348 + 3.35694334496952 NA intron (NM_175473, intron 20 of 73) intron (NM_175473, intron 20 of 73) -170176 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding unique_peak2_3_20_-2.64816741941448_3.06823371307152_3.35694334496952-3 chr17 15230947 15231262 + 3.35694334496952 NA TTS (NR_046164) TTS (NR_046164) 9679 NR_046164 328747 Mm.256835 NR_046164 ENSMUSG00000097624 Gm5091 C330048F19 predicted gene 5091 ncRNA unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-2 chr11 32532823 32533084 + 3.35694334496952 NA promoter-TSS (NM_001359177) promoter-TSS (NM_001359177) -313 NM_001359178 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-8 chr2 132606980 132607468 + 3.35694334496952 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 9028 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-7 chr15 66800390 66800648 + 3.35694334496952 NA intron (NM_001029841, intron 2 of 7) intron (NM_001029841, intron 2 of 7) 31310 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_3_20_-2.64816741941448_3.06823371307152_3.35694334496952 chr12 105597471 105597746 + 3.35694334496952 NA Intergenic Intergenic -6483 NM_007539 12061 Mm.377078 NM_007539 ENSMUSG00000041347 Bdkrb1 B1BKR|B1R|BKR1|BRADYB1|Bdkrb bradykinin receptor, beta 1 protein-coding unique_peak2_3_20_-2.64816741941448_3.06823371307152_3.35694334496952-2 chr15 53331100 53331376 + 3.35694334496952 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 14945 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-3 chr11 116435286 116435527 + 3.35694334496952 NA intron (NM_176902, intron 2 of 2) intron (NM_176902, intron 2 of 2) 1193 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-4 chr14 67071004 67071374 + 3.35694334496952 NA intron (NM_001360034, intron 1 of 8) intron (NM_001360034, intron 1 of 8) 1282 NM_001360034 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-10 chr6 91488027 91488346 + 3.35694334496952 NA 3' UTR (NM_028766, exon 12 of 12) 3' UTR (NM_028766, exon 12 of 12) 14435 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding unique_peak1_23_3_2.31087564644525_3.15543782322262_3.35694334496952-9 chr4 137231840 137232091 + 3.35694334496952 NA Intergenic Intergenic -45670 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding common_peak1_135_62_0.818440974690047_6.38650041084494_3.35637879846184 chr7 92636418 92637906 + 3.35637879846184 NA promoter-TSS (NM_028665) promoter-TSS (NM_028665) -20 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding unique_peak2_12_36_-1.77686021160059_4.32102325982865_3.34305003325519 chr2 32437779 32438201 + 3.34305003325519 NA intron (NM_146118, intron 1 of 10) intron (NM_146118, intron 1 of 10) -6839 NM_001164358 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding unique_peak1_43_11_1.5942129018759_4.38206895165911_3.34305003325519-2 chr15 5194050 5194485 + 3.34305003325519 NA intron (NM_001355621, intron 3 of 5) intron (NM_001355621, intron 3 of 5) 8707 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_43_11_1.5942129018759_4.38206895165911_3.34305003325519 chr15 102991049 102991343 + 3.34305003325519 NA exon (NM_010466, exon 1 of 2) exon (NM_010466, exon 1 of 2) 657 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding unique_peak2_12_36_-1.77686021160059_4.32102325982865_3.34305003325519-3 chr7 3061948 3062399 + 3.34305003325519 NA Intergenic Intergenic -65973 NR_001583 73949 Mm.55687 NR_001583 ENSMUSG00000107956 Speer9-ps1 4930415A14Rik|SPEER-9|Speer9-ps spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1 pseudo unique_peak1_43_11_1.5942129018759_4.38206895165911_3.34305003325519 chr1 131125573 131125928 + 3.34305003325519 NA Intergenic Intergenic 12484 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding unique_peak2_12_36_-1.77686021160059_4.32102325982865_3.34305003325519-2 chr4 147809345 147809785 + 3.34305003325519 NA intron (NM_001127189, intron 1 of 5) intron (NM_001127189, intron 1 of 5) 223 NM_001127189 100041677 Mm.327194 NM_001127189 ENSMUSG00000078495 Zfp984 Gm13157 zinc finger protein 984 protein-coding unique_peak1_61_20_1.27813211677402_5.03138348116577_3.34149582302667-2 chr3 95663508 95664435 + 3.34149582302667 NA TTS (NM_008562) TTS (NM_008562) 5250 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak1_61_20_1.27813211677402_5.03138348116577_3.34149582302667 chr17 78364079 78364903 + 3.34149582302667 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 53661 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_61_20_1.27813211677402_5.03138348116577_3.34149582302667 chr10 121375710 121376615 + 3.34149582302667 NA intron (NM_029364, intron 3 of 13) intron (NM_029364, intron 3 of 13) 11072 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding unique_peak1_61_20_1.27813211677402_5.03138348116577_3.34149582302667-3 chr9 102992849 102993435 + 3.34149582302667 NA Intergenic Intergenic -15347 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak1_90_36_1.01068887882705_5.71479780504247_3.34099365104675 chr15 82147282 82148079 + 3.34099365104675 NA intron (NM_033218, intron 1 of 18) CpG 411 NM_033218 20788 Mm.38016 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak1_279_155_0.544788834963823_7.55779663634416_3.34094623748495 chr5 115506726 115508777 + 3.34094623748495 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 1075 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_116_51_0.879714681195686_6.14029705873893_3.34090850308067 chr2 34871115 34872184 + 3.34090850308067 NA promoter-TSS (NM_080554) promoter-TSS (NM_080554) -687 NM_080554 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_195_234_-0.557268762345434_7.59788256539228_3.3370447469178 chr2 117120403 117122749 + 3.3370447469178 NA 5' UTR (NM_033524, exon 1 of 7) 5' UTR (NM_033524, exon 1 of 7) 505 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak1_121_54_0.858741376204972_6.21073040162715_3.33072134954204-2 chr5 150664854 150665634 + 3.33072134954204 NA intron (NM_001362416, intron 1 of 7) CpG 368 NM_001362416 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|Gm38758|zag1 NEDD4 binding protein 2-like 2 protein-coding common_peak1_121_54_0.858741376204972_6.21073040162715_3.33072134954204 chr19 56994029 56994762 + 3.33072134954204 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 14180 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_357_387_-0.417690249423863_8.3910677174752_3.32937121335237 chr19 5802760 5805118 + 3.32937121335237 NA Intergenic CpG -1267 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_136_175_-0.653216044521518_7.13282359637654_3.32861144773267 chr11 88527031 88528531 + 3.32861144773267 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -91470 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_55_89_-0.967208982110995_6.00824860527418_3.32759151222525 chr9 65549267 65550283 + 3.32759151222525 NA Intergenic L2b|LINE|L2 30312 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_108_46_0.924106033450808_6.01664186840304_3.32759151222525 chr1 21008067 21008920 + 3.32759151222525 NA intron (NM_177409, intron 4 of 10) intron (NM_177409, intron 4 of 10) 56867 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_108_46_0.924106033450808_6.01664186840304_3.32759151222525-2 chr11 94957331 94958119 + 3.32759151222525 NA Intergenic Intergenic -9868 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding common_peak1_260_142_0.569657909480544_7.44470029151866_3.32664112287372 chr12 112588767 112591131 + 3.32664112287372 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 1165 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_49_82_-1.01274056919462_5.86866914674962_3.32626477626167 chr1 66837784 66838887 + 3.32626477626167 NA exon (NM_007381, exon 9 of 11) exon (NM_007381, exon 9 of 11) -20740 NM_001122738 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak2_515_317_0.3930302384328_8.50939807450075_3.32435448679895 chr3 87149165 87151870 + 3.32435448679895 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 24230 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_96_133_-0.754478636046694_6.68884987243442_3.32099502010001 chr12 25099712 25101236 + 3.32099502010001 NA Intergenic Intergenic -4382 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak1_65_22_1.2364490487675_5.14178648044076_3.32003866131526 chr15 34238143 34238565 + 3.32003866131526 NA exon (NM_033521, exon 1 of 7) exon (NM_033521, exon 1 of 7) 328 NM_033521 114128 Mm.197518 NM_033521 ENSMUSG00000022257 Laptm4b C330023P13Rik|LAPTM4beta lysosomal-associated protein transmembrane 4B protein-coding common_peak1_173_86_0.70575014818275_6.7958185699401_3.31853560028902 chr6 35538268 35539739 + 3.31853560028902 NA intron (NM_008098, intron 1 of 3) intron (NM_008098, intron 1 of 3) 885 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak1_38_69_-1.1229092402624_5.56782839681377_3.31398737278681 chr7 49602121 49602719 + 3.31398737278681 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 34415 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_38_69_-1.1229092402624_5.56782839681377_3.31398737278681 chr18 38631112 38631958 + 3.31398737278681 NA Intergenic Intergenic -30267 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak1_83_32_1.06108559708768_5.57493691790229_3.3139873727868 chr7 35555487 35556080 + 3.3139873727868 NA exon (NM_033080, exon 1 of 3) exon (NM_033080, exon 1 of 3) 145 NM_033080 110959 Mm.410206 NM_033080 ENSMUSG00000034875 Nudt19 D7Rp2|D7Rp2-r|D7Rp2-s|D7Rp2e|RP2-r|RP2-s nudix (nucleoside diphosphate linked moiety X)-type motif 19 protein-coding unique_peak2_19_46_-1.50489190870596_4.80214289732466_3.31195702770221 chr12 102439004 102439599 + 3.31195702770221 NA intron (NM_011175, intron 1 of 13) intron (NM_011175, intron 1 of 13) 512 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak2_55_17_1.35471911277637_4.8472845578305_3.31195702770221 chr3 137150722 137151047 + 3.31195702770221 NA Intergenic Intergenic -190194 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_55_17_1.35471911277637_4.8472845578305_3.31195702770221 chr14 36893364 36894158 + 3.31195702770221 NA intron (NM_027045, intron 9 of 10) intron (NM_027045, intron 9 of 10) 25774 NM_001347503 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-25 chr3 123011282 123011588 + 3.31132995230379 NA intron (NM_021503, intron 5 of 5) intron (NM_021503, intron 5 of 5) 23552 NM_021503 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-6 chr14 66249516 66249815 + 3.31132995230379 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 31387 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-14 chr18 14987888 14988121 + 3.31132995230379 NA promoter-TSS (NR_045372) promoter-TSS (NR_045372) -991 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-11 chr14 121400033 121400248 + 3.31132995230379 NA Intergenic Intergenic -20910 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-27 chr7 127018489 127018748 + 3.31132995230379 NA 3' UTR (NM_001102563, exon 4 of 4) 3' UTR (NM_001102563, exon 4 of 4) -1266 NM_030240 67278 Mm.345385 NM_030240 ENSMUSG00000107068 Pagr1a 2900092E17Rik|C77040|PA1|PAGR1 PAXIP1 associated glutamate rich protein 1A protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-22 chr2 180568964 180569159 + 3.31132995230379 NA Intergenic Intergenic -12161 NM_028479 73247 Mm.426558 NM_028479 ENSMUSG00000027569 Mrgbp 1600027N09Rik|AW060503|C80444 MRG/MORF4L binding protein protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-3 chr11 104704091 104704295 + 3.31132995230379 NA Intergenic Intergenic 96193 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-19 chr2 72370475 72370688 + 3.31132995230379 NA intron (NM_023057, intron 5 of 19) intron (NM_023057, intron 5 of 19) 84880 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-2 chr1 86113843 86114122 + 3.31132995230379 NA intron (NM_027357, intron 16 of 24) intron (NM_027357, intron 16 of 24) -2012 NM_008311 15559 Mm.439747 NM_008311 ENSMUSG00000026228 Htr2b 5-HT2B|AJ012488|AV377389 5-hydroxytryptamine (serotonin) receptor 2B protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-4 chr13 24051199 24051391 + 3.31132995230379 NA intron (NM_026825, intron 30 of 37) intron (NM_026825, intron 30 of 37) -60081 NM_145399 214189 Mm.255667 NM_145399 ENSMUSG00000021337 Scgn - secretagogin, EF-hand calcium binding protein protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-29 chr8 94870043 94870255 + 3.31132995230379 NA intron (NM_053246, intron 2 of 8) intron (NM_053246, intron 2 of 8) 6163 NM_053246 114255 Mm.203949 NM_053246 ENSMUSG00000040631 Dok4 - docking protein 4 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-16 chr19 32767573 32767780 + 3.31132995230379 NA intron (NM_008960, intron 1 of 8) intron (NM_008960, intron 1 of 8) 10099 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-9 chr14 70473835 70474158 + 3.31132995230379 NA TTS (NM_001360021) TTS (NM_001360021) 16479 NM_145981 105653 Mm.192598 NM_145981 ENSMUSG00000003469 Phyhip AW049870|C630010D02Rik|Lnap1ip|PAHX-AP#1|PAHX-AP1 phytanoyl-CoA hydroxylase interacting protein protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-24 chr3 116155491 116155711 + 3.31132995230379 NA Intergenic Intergenic -25913 NM_011693 22329 Mm.76649 NM_011693 ENSMUSG00000027962 Vcam1 CD106|Vcam-1 vascular cell adhesion molecule 1 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-31 chrX 162302397 162302591 + 3.31132995230379 NA Intergenic Intergenic -143053 NM_001290526 195727 Mm.336313 NM_001081052 ENSMUSG00000059493 Nhs Gm389|Gm48|Nhs1|Xcat NHS actin remodeling regulator protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-21 chr2 116922184 116922388 + 3.31132995230379 NA Intergenic Intergenic 22134 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-7 chr14 66829021 66829220 + 3.31132995230379 NA intron (NM_009955, intron 6 of 13) intron (NM_009955, intron 6 of 13) 39480 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-15 chr19 28630492 28630702 + 3.31132995230379 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -47627 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-10 chr14 99053935 99054123 + 3.31132995230379 NA intron (NR_153765, intron 4 of 12) intron (NR_153765, intron 4 of 12) 7652 NM_175265 77744 Mm.23503 NM_175265 ENSMUSG00000022070 Bora 6720463M24Rik|AI317232 bora, aurora kinase A activator protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-26 chr5 38026913 38027102 + 3.31132995230379 NA Intergenic Intergenic -12223 NM_001289536 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379 chr1 62732926 62733173 + 3.31132995230379 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 29732 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-13 chr16 95259035 95259260 + 3.31132995230379 NA intron (NM_001271687, intron 3 of 4) intron (NM_001271687, intron 3 of 4) 555 NR_153766 102633941 Mm.384086 NR_153766 Gm31641 - predicted gene, 31641 ncRNA unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-18 chr2 20969732 20969923 + 3.31132995230379 NA non-coding (NR_033225, exon 2 of 2) non-coding (NR_033225, exon 2 of 2) 953 NR_033225 433408 Mm.386941 NR_033225 Gm13375 - predicted gene 13375 ncRNA unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-12 chr16 23518054 23518244 + 3.31132995230379 NA intron (NM_001359083, intron 1 of 10) intron (NM_001359083, intron 1 of 10) 2666 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-28 chr8 54114305 54114541 + 3.31132995230379 NA intron (NM_009506, intron 1 of 6) intron (NM_009506, intron 1 of 6) 36891 NM_009506 22341 Mm.1402 NM_009506 ENSMUSG00000031520 Vegfc AW228853|VEGF-C vascular endothelial growth factor C protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-17 chr2 13727446 13727730 + 3.31132995230379 NA intron (NM_145838, intron 2 of 7) intron (NM_145838, intron 2 of 7) 65932 NM_145838 241230 Mm.330004 NM_145838 ENSMUSG00000003418 St8sia6 1700007J08Rik|AI314453|AI875066|ST8SiaVI|Siat8f ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-30 chr9 56541961 56542193 + 3.31132995230379 NA Intergenic Intergenic 93571 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-23 chr3 8960884 8961123 + 3.31132995230379 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 3143 NM_001025262 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-8 chr14 69459703 69459908 + 3.31132995230379 NA Intergenic Intergenic 52744 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-5 chr13 28717773 28717999 + 3.31132995230379 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -7013 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_11_0_3.31793062601849_1.65896531300925_3.31132995230379-20 chr2 113620213 113620461 + 3.31132995230379 NA intron (NM_001285459, intron 12 of 16) intron (NM_001285459, intron 12 of 16) -64753 NM_001287818 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_113_49_0.899087887424632_6.09340013348704_3.31086661446843 chr13 55362022 55362875 + 3.31086661446843 NA exon (NM_025828, exon 1 of 8) exon (NM_025828, exon 1 of 8) 335 NM_025828 66890 Mm.38868 NM_025828 ENSMUSG00000021484 Lman2 1110003H06Rik|1300009F09Rik|AA408240|AL023023|AU040819|GP36B|VIP36 lectin, mannose-binding 2 protein-coding common_peak2_221_117_0.615043334776566_7.19016471675013_3.3090898844296 chr3 51224017 51225662 + 3.3090898844296 NA 5' UTR (NM_009834, exon 1 of 3) 5' UTR (NM_009834, exon 1 of 3) 392 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_109_147_-0.717676043851256_6.85061534370332_3.30725502115395 chr12 51690804 51691914 + 3.30725502115395 NA intron (NM_001329698, intron 1 of 5) CpG 393 NM_001329698 11782 Mm.386749 NM_021710 ENSMUSG00000020955 Ap4s1 AI314282 adaptor-related protein complex AP-4, sigma 1 protein-coding common_peak1_179_90_0.689463548081399_6.8525264142394_3.30725502115395 chr11 86356658 86358351 + 3.30725502115395 NA promoter-TSS (NM_001080931) promoter-TSS (NM_001080931) 21 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding common_peak1_69_24_1.20044482319783_5.24407860137364_3.30710968968638 chr14 45530324 45530930 + 3.30710968968638 NA promoter-TSS (NM_001360525) promoter-TSS (NM_001360525) -562 NM_001360525 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_79_30_1.08139067343831_5.49489164710603_3.3054085949608 chr3 21988024 21988920 + 3.3054085949608 NA Intergenic Intergenic -88180 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_79_30_1.08139067343831_5.49489164710603_3.3054085949608-2 chr3 102204042 102204713 + 3.3054085949608 NA intron (NM_177545, intron 1 of 7) CpG 316 NM_177545 229658 Mm.118004 NM_177545 ENSMUSG00000027860 Vangl1 Kitenin|Lpp2|Stb2|Stbm VANGL planar cell polarity 1 protein-coding unique_peak2_11_34_-1.81135239092647_4.22360682148173_3.30471521892359 chr1 89104012 89104567 + 3.30471521892359 NA intron (NM_133816, intron 1 of 5) intron (NM_133816, intron 1 of 5) 33874 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_11_34_-1.81135239092647_4.22360682148173_3.30471521892359-2 chr16 97962365 97962610 + 3.30471521892359 NA 5' UTR (NM_001081684, exon 1 of 2) 5' UTR (NM_001081684, exon 1 of 2) 135 NM_001081685 114565 Mm.474489 NM_175428 ENSMUSG00000046962 Zbtb21 5430437K12Rik|B430213I24Rik|Zfp295|Znf295|mKIAA1227 zinc finger and BTB domain containing 21 protein-coding common_peak2_30_60_-1.25323281843686_5.30412092834446_3.30112488607945 chr7 28377249 28378021 + 3.30112488607945 NA exon (NM_011756, exon 2 of 2) exon (NM_011756, exon 2 of 2) 1593 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding unique_peak1_72_26_1.14952793340246_5.3296514688647_3.30112488607944 chr4 105361654 105362873 + 3.30112488607944 NA Intergenic Intergenic 204916 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak2_33_63_-1.19016914266355_5.40491542866823_3.30087239302457 chr15 82146399 82146972 + 3.30087239302457 NA promoter-TSS (NM_033218) promoter-TSS (NM_033218) -584 NM_033218 20788 Mm.38016 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak1_174_87_0.697471313515897_6.80816727539525_3.29175504965686 chr19 5040826 5041967 + 3.29175504965686 NA promoter-TSS (NM_134155) promoter-TSS (NM_134155) 42 NM_134155 107392 Mm.29628 NM_134155 ENSMUSG00000080268 Brms1 AV003220|AW554636 breast cancer metastasis-suppressor 1 protein-coding common_peak2_66_101_-0.890872324331108_6.22698917980594_3.29067865017931 chr16 31274378 31275152 + 3.29067865017931 NA intron (NM_025800, intron 1 of 5) CpG 512 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-13 chr14 46060090 46060307 + 3.28500101358144 NA Intergenic Intergenic -23829 NR_002875 218963 Mm.282093 NR_002875 Gm1821 - ubiquitin pseudogene pseudo unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144 chr1 89478686 89479093 + 3.28500101358144 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 24078 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-20 chr19 17285028 17285253 + 3.28500101358144 NA Intergenic Intergenic 54365 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-29 chr3 59279267 59279606 + 3.28500101358144 NA intron (NM_177855, intron 38 of 43) intron (NM_177855, intron 38 of 43) -16451 NM_001357010 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-18 chr17 81581525 81581998 + 3.28500101358144 NA intron (NR_104580, intron 2 of 8) intron (NR_104580, intron 2 of 8) 156626 NM_001286684 20541 Mm.265834 NM_011406 ENSMUSG00000054640 Slc8a1 AI852629|AV344025|D930008O12Rik|Ncx1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-31 chr4 57554716 57555180 + 3.28500101358144 NA Intergenic Intergenic -13300 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-7 chr12 52377179 52377468 + 3.28500101358144 NA Intergenic Intergenic 103286 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-15 chr15 89107408 89107662 + 3.28500101358144 NA exon (NM_001163319, exon 10 of 25) exon (NM_001163319, exon 10 of 25) 15615 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-5 chr10 117746108 117746353 + 3.28500101358144 NA 5' UTR (NM_029875, exon 1 of 5) 5' UTR (NM_029875, exon 1 of 5) 128 NM_029875 215436 Mm.256753 NM_029875 ENSMUSG00000060181 Slc35e3 9330166G04Rik|AI481200 solute carrier family 35, member E3 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-9 chr13 74096793 74097193 + 3.28500101358144 NA Intergenic Intergenic -24522 NM_001081060 105243 Mm.261564 NM_001081060 ENSMUSG00000036123 Slc9a3 9030624O13Rik|AI930210|NHE-3|NHE3 solute carrier family 9 (sodium/hydrogen exchanger), member 3 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-39 chr9 21790257 21790528 + 3.28500101358144 NA intron (NM_145611, intron 3 of 11) intron (NM_145611, intron 3 of 11) 8154 NM_145611 235041 Mm.257371 NM_145611 ENSMUSG00000032194 Kank2 AI504612|Ankrd25|BC010245 KN motif and ankyrin repeat domains 2 protein-coding unique_peak2_1_15_-3.24879501706247_2.37560249146876_3.28500101358144-4 chr16 23232896 23233138 + 3.28500101358144 NA intron (NM_001252505, intron 1 of 7) intron (NM_001252505, intron 1 of 7) 6996 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak2_1_15_-3.24879501706247_2.37560249146876_3.28500101358144-5 chr9 41105673 41105916 + 3.28500101358144 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -26288 NM_001357412 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|STS-1|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-4 chr1 191622342 191622675 + 3.28500101358144 NA 3' UTR (NM_001306203, exon 19 of 19) 3' UTR (NM_001306203, exon 19 of 19) 46872 NM_001306204 77065 Mm.338175 NM_178632 ENSMUSG00000037461 Ints7 5930412E23Rik|int7 integrator complex subunit 7 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-12 chr14 34297727 34298018 + 3.28500101358144 NA intron (NR_153399, intron 2 of 11) intron (NR_153399, intron 2 of 11) 12645 NR_153399 75698 Mm.45406 NM_029389 ENSMUSG00000041471 Fam35a 3110001K24Rik family with sequence similarity 35, member A protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-17 chr17 30847273 30847495 + 3.28500101358144 NA intron (NM_013811, intron 88 of 92) intron (NM_013811, intron 88 of 92) -54483 NM_021332 14652 Mm.390969 NM_021332 ENSMUSG00000024027 Glp1r GLP-1R|GLP1Rc glucagon-like peptide 1 receptor protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-37 chr8 106888610 106888874 + 3.28500101358144 NA intron (NM_145412, intron 1 of 3) intron (NM_145412, intron 1 of 3) 4851 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-22 chr19 53310756 53311007 + 3.28500101358144 NA promoter-TSS (NM_001360348) promoter-TSS (NM_001360348) 375 NM_001008542 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding unique_peak2_1_15_-3.24879501706247_2.37560249146876_3.28500101358144 chr10 70599370 70599764 + 3.28500101358144 NA promoter-TSS (NM_178621) promoter-TSS (NM_178621) -276 NM_178621 70911 Mm.19825 NM_178621 ENSMUSG00000037747 Phyhipl 4921522K17Rik|AI267048 phytanoyl-CoA hydroxylase interacting protein-like protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-21 chr19 46979485 46979699 + 3.28500101358144 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) -10025 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-36 chr8 94872541 94872807 + 3.28500101358144 NA intron (NM_053246, intron 1 of 8) intron (NM_053246, intron 1 of 8) 3638 NM_053246 114255 Mm.203949 NM_053246 ENSMUSG00000040631 Dok4 - docking protein 4 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-24 chr2 27916738 27916964 + 3.28500101358144 NA intron (NM_015734, intron 1 of 65) intron (NM_015734, intron 1 of 65) 30426 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak2_1_15_-3.24879501706247_2.37560249146876_3.28500101358144-2 chr13 112416022 112416262 + 3.28500101358144 NA Intergenic Intergenic -47928 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-14 chr15 57693240 57693525 + 3.28500101358144 NA Intergenic Intergenic -1285 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-6 chr11 78044681 78044948 + 3.28500101358144 NA intron (NM_001284228, intron 1 of 11) intron (NM_001284228, intron 1 of 11) 4507 NM_001284228 14252 Mm.130227 NM_008028 ENSMUSG00000061981 Flot2 AI573412|Esa|reggie-2 flotillin 2 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-35 chr8 41016261 41016453 + 3.28500101358144 NA intron (NM_001005863, intron 6 of 13) intron (NM_001005863, intron 6 of 13) -1111 NR_015457 78849 Mm.440930 NR_015457 ENSMUSG00000084960 B430010I23Rik - RIKEN cDNA B430010I23 gene ncRNA unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-23 chr2 4566890 4567205 + 3.28500101358144 NA intron (NM_001177844, intron 2 of 11) intron (NM_001177844, intron 2 of 11) 7293 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-27 chr2 143905044 143905244 + 3.28500101358144 NA Intergenic Intergenic -10187 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-10 chr13 103980620 103980821 + 3.28500101358144 NA Intergenic Intergenic -60134 NM_001005868 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-19 chr19 16899080 16899335 + 3.28500101358144 NA Intergenic B1F1|SINE|Alu -25377 NM_008023 14240 Mm.7971 NM_008023 ENSMUSG00000056829 Foxb2 Fkh4 forkhead box B2 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-2 chr1 105357018 105357398 + 3.28500101358144 NA promoter-TSS (NM_178779) promoter-TSS (NM_178779) -498 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-16 chr16 34562860 34563228 + 3.28500101358144 NA Intergenic Intergenic -49017 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-30 chr3 93536770 93537086 + 3.28500101358144 NA Intergenic Intergenic 16432 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-34 chr8 25277649 25277944 + 3.28500101358144 NA Intergenic Intergenic 28474 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-11 chr14 25540484 25540893 + 3.28500101358144 NA intron (NM_183208, intron 3 of 23) intron (NM_183208, intron 3 of 23) 6249 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-33 chr8 12795928 12796149 + 3.28500101358144 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 35881 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-26 chr2 132592271 132592548 + 3.28500101358144 NA Intergenic Intergenic -5787 NR_033468 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-38 chr8 111035250 111035551 + 3.28500101358144 NA intron (NM_146217, intron 1 of 20) intron (NM_146217, intron 1 of 20) 1558 NM_146217 234734 Mm.24174 NM_146217 ENSMUSG00000031960 Aars AI316495|C76919|sti alanyl-tRNA synthetase protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-8 chr13 49013199 49013407 + 3.28500101358144 NA Intergenic Intergenic 45191 NR_015601 68128 Mm.426304 NR_015601 Fam120aos C030044B11Rik family with sequence similarity 120A, opposite strand ncRNA unique_peak2_1_15_-3.24879501706247_2.37560249146876_3.28500101358144-3 chr15 100600406 100600624 + 3.28500101358144 NA promoter-TSS (NM_001304965) promoter-TSS (NM_001304965) -531 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-25 chr2 113450880 113451247 + 3.28500101358144 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 9999 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-28 chr2 167264323 167264613 + 3.28500101358144 NA Intergenic Intergenic -23931 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-3 chr1 159844185 159844485 + 3.28500101358144 NA intron (NM_022312, intron 2 of 22) intron (NM_022312, intron 2 of 22) -200045 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_17_2_2.31380372752479_2.74186436448355_3.28500101358144-32 chr6 13872395 13872609 + 3.28500101358144 NA promoter-TSS (NM_001352887) promoter-TSS (NM_001352887) 933 NR_045995 76311 Mm.367129 NR_045995 ENSMUSG00000097616 1110019D14Rik - RIKEN cDNA 1110019D14 gene ncRNA common_peak1_181_91_0.689525308825742_6.86832461046988_3.28160121242369 chr15 38918993 38920955 + 3.28160121242369 NA Intergenic Intergenic -13935 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-7 chr15 78836285 78836668 + 3.28004177908661 NA Intergenic Intergenic -6171 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding unique_peak2_4_22_-2.45975505393885_3.29368442908759_3.28004177908661-5 chr9 107706497 107707013 + 3.28004177908661 NA intron (NM_011349, intron 1 of 17) intron (NM_011349, intron 1 of 17) -1164 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-3 chr13 12704214 12704666 + 3.28004177908661 NA Intergenic PB1D7|SINE|Alu -54045 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik G protein-coupled receptor 137B, pseudogene pseudo unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-5 chr14 27114175 27114591 + 3.28004177908661 NA Intergenic Intergenic -29610 NM_001289686 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_4_22_-2.45975505393885_3.29368442908759_3.28004177908661 chr1 90440482 90440702 + 3.28004177908661 NA Intergenic Intergenic -162833 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661 chr11 20542219 20542506 + 3.28004177908661 NA promoter-TSS (NM_021372) promoter-TSS (NM_021372) -891 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-8 chr17 25753031 25753452 + 3.28004177908661 NA intron (NM_018857, intron 3 of 15) intron (NM_018857, intron 3 of 15) 1137 NM_018857 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-9 chr18 64815468 64815908 + 3.28004177908661 NA Intergenic Intergenic -72068 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-10 chr2 70062525 70063107 + 3.28004177908661 NA intron (NM_177376, intron 2 of 34) intron (NM_177376, intron 2 of 34) 23690 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-6 chr14 121097900 121098457 + 3.28004177908661 NA intron (NM_134082, intron 1 of 26) intron (NM_134082, intron 1 of 26) 62604 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-11 chr4 114359098 114359367 + 3.28004177908661 NA Intergenic Intergenic -47492 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak2_4_22_-2.45975505393885_3.29368442908759_3.28004177908661-4 chr7 112252445 112252737 + 3.28004177908661 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 26755 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_4_22_-2.45975505393885_3.29368442908759_3.28004177908661-3 chr7 112251359 112251567 + 3.28004177908661 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 25627 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_4_22_-2.45975505393885_3.29368442908759_3.28004177908661-2 chr1 192786514 192786753 + 3.28004177908661 NA Intergenic Intergenic -15414 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-2 chr11 74570003 74570444 + 3.28004177908661 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 19935 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-4 chr13 60661962 60662307 + 3.28004177908661 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 59923 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak1_26_4_2.15767373558604_3.40076496268038_3.28004177908661-12 chr7 66603354 66603739 + 3.28004177908661 NA Intergenic Intergenic 86015 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak2_10_32_-1.8511087576149_4.118839740551_3.27210358356897-2 chr8 37061322 37061967 + 3.27210358356897 NA Intergenic Intergenic -37406 NR_126063 414128 Mm.450976 NR_126063 ENSMUSG00000110242 G630064G18Rik - RIKEN cDNA G630064G18 gene ncRNA unique_peak1_38_9_1.68444568179521_4.16415093578497_3.27210358356897 chr12 73907236 73907746 + 3.27210358356897 NA promoter-TSS (NM_010431) promoter-TSS (NM_010431) -376 NM_010431 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding unique_peak1_38_9_1.68444568179521_4.16415093578497_3.27210358356897-3 chr9 14522284 14522693 + 3.27210358356897 NA Intergenic Intergenic 21869 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding unique_peak2_10_32_-1.8511087576149_4.118839740551_3.27210358356897 chr17 27081716 27082120 + 3.27210358356897 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) -9327 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA unique_peak1_38_9_1.68444568179521_4.16415093578497_3.27210358356897-2 chr12 111705402 111706018 + 3.27210358356897 NA Intergenic Intergenic 7243 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak1_145_183_-0.62620150006433_7.21046120602485_3.26862973950663 chr8 94011298 94012544 + 3.26862973950663 NA intron (NM_011787, intron 1 of 13) CpG 719 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak1_60_94_-0.922699539028072_6.10850583881691_3.26766896473391 chr15 74623292 74623713 + 3.26766896473391 NA intron (NM_001177437, intron 11 of 26) intron (NM_001177437, intron 11 of 26) 12816 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak2_60_94_-0.922699539028072_6.10850583881691_3.26766896473391 chr6 42489233 42490267 + 3.26766896473391 NA Intergenic Intergenic -2536 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak1_88_35_1.01838222495762_5.67911611392112_3.26745427583628 chr5 139010160 139010845 + 3.26745427583628 NA Intergenic Intergenic -15549 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_88_35_1.01838222495762_5.67911611392112_3.26745427583628 chr7 92637272 92638000 + 3.26745427583628 NA promoter-TSS (NM_028665) promoter-TSS (NM_028665) -494 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding common_peak1_243_132_0.577763674655198_7.34416427282879_3.26641374538266 chr3 69125630 69127689 + 3.26641374538266 NA intron (NM_008467, intron 1 of 16) CpG 433 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding common_peak1_189_227_-0.558179620012203_7.55380020415864_3.26556650626621 chr2 117120432 117122598 + 3.26556650626621 NA 5' UTR (NM_033524, exon 1 of 7) 5' UTR (NM_033524, exon 1 of 7) 444 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak1_143_68_0.769076832748048_6.49306287315219_3.25588449077893 chr15 79061898 79062836 + 3.25588449077893 NA intron (NM_144849, intron 1 of 7) intron (NM_144849, intron 1 of 7) 492 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding common_peak1_46_13_1.46630638124445_4.54050811267983_3.25519915520379 chr15 85705404 85705788 + 3.25519915520379 NA intron (NR_110483, intron 1 of 1) intron (NR_110483, intron 1 of 1) -1007 NR_029729 723966 NR_029729 ENSMUSG00000065608 Mirlet7c-2 Mirnlet7c-2|let-7c-2 microRNA let7c-2 ncRNA unique_peak1_46_13_1.46630638124445_4.54050811267983_3.25519915520379 chr1 133959563 133960046 + 3.25519915520379 NA Intergenic Intergenic -38403 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak1_54_87_-0.960599317286358_5.97913195999412_3.25396860184761 chr5 34335664 34336154 + 3.25396860184761 NA promoter-TSS (NM_011278) promoter-TSS (NM_011278) -341 NM_011278 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak1_84_33_1.03496993526675_5.60494780888371_3.25270822138957 chr19 21274097 21275141 + 3.25270822138957 NA intron (NM_009551, intron 1 of 5) intron (NM_009551, intron 1 of 5) 2341 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak2_47_80_-1.03602933601262_5.82183533487832_3.25247856210074 chr2 60382547 60383366 + 3.25247856210074 NA intron (NM_013825, intron 1 of 34) intron (NM_013825, intron 1 of 34) 275 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding common_peak1_62_21_1.23393867960954_5.07640095844207_3.2524299487632-2 chr8 68734826 68735540 + 3.2524299487632 NA promoter-TSS (NM_001252623) promoter-TSS (NM_001252623) -37 NM_172753 234356 Mm.334569 NM_172753 ENSMUSG00000036356 Csgalnact1 4732435N03Rik|CSGalNAcT-1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding unique_peak1_62_21_1.23393867960954_5.07640095844207_3.2524299487632-2 chr11 61761576 61762115 + 3.2524299487632 NA intron (NM_144806, intron 1 of 11) CpG 243 NM_144806 212627 Mm.27703 NM_144806 ENSMUSG00000020528 Prpsap2 A230054F23Rik phosphoribosyl pyrophosphate synthetase-associated protein 2 protein-coding unique_peak1_62_21_1.23393867960954_5.07640095844207_3.2524299487632 chr1 74298018 74298899 + 3.2524299487632 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 5878 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_62_21_1.23393867960954_5.07640095844207_3.2524299487632 chr4 118620876 118621274 + 3.2524299487632 NA promoter-TSS (NM_026789) promoter-TSS (NM_026789) 276 NM_026932 69072 Mm.29906 NM_026932 ENSMUSG00000028729 Ebna1bp2 1810014B19Rik|AA537058|B830003A16Rik|C81321|Ebp2|Nobp|p40 EBNA1 binding protein 2 protein-coding unique_peak2_25_52_-1.30238228010809_5.07672931450916_3.2524299487632 chr8 25012102 25012658 + 3.2524299487632 NA intron (NM_001270996, intron 1 of 21) intron (NM_001270996, intron 1 of 21) 4542 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak1_124_56_0.842010767168202_6.25389539774884_3.25169660383705 chr5 123140871 123143209 + 3.25169660383705 NA promoter-TSS (NM_001040398) promoter-TSS (NM_001040398) -153 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak2_18_44_-1.51563466221128_4.73403576522403_3.25159220037128 chr15 5244844 5245092 + 3.25159220037128 NA promoter-TSS (NM_008965) promoter-TSS (NM_008965) -781 NM_008965 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak1_53_16_1.38508400964982_4.78000484607525_3.25159220037128 chr11 70018694 70019439 + 3.25159220037128 NA intron (NM_007864, intron 1 of 19) intron (NM_007864, intron 1 of 19) 461 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding common_peak1_138_65_0.782582932024633_6.43568558537077_3.25122790825921 chr7 66384403 66385595 + 3.25122790825921 NA intron (NM_146191, intron 1 of 33) intron (NM_146191, intron 1 of 33) -3275 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_129_59_0.824194518453985_6.31898785483551_3.24881888987852 chr14 65112129 65113910 + 3.24881888987852 NA Intergenic ID_B1|SINE|B4 -14913 NM_001360385 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak2_75_110_-0.832307391378204_6.378262170661_3.24877649806689 chr9 63703050 63704732 + 3.24877649806689 NA intron (NM_016769, intron 1 of 8) AT_rich|Low_complexity|Low_complexity 54103 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_196_234_-0.549978584490324_7.60152765431984_3.24750218558612 chr10 95414172 95417192 + 3.24750218558612 NA promoter-TSS (NM_001168657) promoter-TSS (NM_001168657) -198 NM_001168656 216233 Mm.474283 NM_007706 ENSMUSG00000020027 Socs2 8030460M17|AI527257|AW108012|CIS2|Cish2|D130043N08Rik|JAB|SOCS-2|SSI-2|hg suppressor of cytokine signaling 2 protein-coding unique_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819-2 chr13 34399629 34399966 + 3.2467506969819 NA Intergenic Intergenic -54615 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak2_9_30_-1.89744438784196_4.0054741164659_3.2467506969819 chr5 142544941 142545446 + 3.2467506969819 NA promoter-TSS (NM_001310752) promoter-TSS (NM_001310752) -166 NM_001310752 231858 Mm.33766 NM_178702 ENSMUSG00000029576 Radil AI536456|D930005D10Rik Ras association and DIL domains protein-coding unique_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819-5 chr2 158028984 158029390 + 3.2467506969819 NA promoter-TSS (NM_029282) promoter-TSS (NM_029282) 690 NM_001291135 70470 Mm.290810 NM_027434 ENSMUSG00000027651 Rprd1b 2610304G08Rik|2810446G03Rik|Crept regulation of nuclear pre-mRNA domain containing 1B protein-coding unique_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819-4 chr19 12491016 12491453 + 3.2467506969819 NA intron (NM_172442, intron 2 of 8) intron (NM_172442, intron 2 of 8) 10762 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding common_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819 chr2 90502031 90502479 + 3.2467506969819 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -23081 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_9_30_-1.89744438784196_4.0054741164659_3.2467506969819-2 chr7 4780478 4780843 + 3.2467506969819 NA intron (NM_001290423, intron 1 of 4) intron (NM_001290423, intron 1 of 4) 2197 NM_001290423 16156 Mm.35814 NM_008350 ENSMUSG00000004371 Il11 IL-11 interleukin 11 protein-coding common_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819-2 chr8 46499136 46499445 + 3.2467506969819 NA intron (NM_001302163, intron 2 of 20) intron (NM_001302163, intron 2 of 20) 8324 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding unique_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819 chr13 34073554 34074047 + 3.2467506969819 NA TTS (NM_009450) TTS (NM_009450) 4208 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak1_35_8_1.72178624723039_4.03081812505751_3.2467506969819-3 chr13 93996386 93996915 + 3.2467506969819 NA Intergenic Intergenic -61146 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_200_104_0.641088122628476_7.03478957898036_3.24280240079117 chr2 158215478 158217565 + 3.24280240079117 NA exon (NM_177657, exon 3 of 14) exon (NM_177657, exon 3 of 14) 12703 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_28_5_1.99700550022935_3.58346525083583_3.24127775360835-6 chr8 12759102 12759475 + 3.24127775360835 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 2272 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_28_5_1.99700550022935_3.58346525083583_3.24127775360835-5 chr7 116458336 116458808 + 3.24127775360835 NA Intergenic Intergenic -15114 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding unique_peak2_5_24_-2.31887058418299_3.48442089768323_3.24127775360835 chr10 16874225 16874650 + 3.24127775360835 NA Intergenic Intergenic 221345 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_28_5_1.99700550022935_3.58346525083583_3.24127775360835 chr15 100687546 100687940 + 3.24127775360835 NA intron (NM_033612, intron 1 of 7) intron (NM_033612, intron 1 of 7) 177 NM_033612 109901 Mm.2131 NM_033612 ENSMUSG00000023031 Cela1 1810009A17Rik|1810062B19Rik|Ela-1|Ela1|PC-TsF chymotrypsin-like elastase family, member 1 protein-coding unique_peak1_28_5_1.99700550022935_3.58346525083583_3.24127775360835-2 chr2 32883897 32884293 + 3.24127775360835 NA intron (NM_146119, intron 1 of 13) MIR|SINE|MIR 7961 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_28_5_1.99700550022935_3.58346525083583_3.24127775360835-3 chr2 121415093 121415523 + 3.24127775360835 NA intron (NM_007952, intron 1 of 12) intron (NM_007952, intron 1 of 12) 1406 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding unique_peak2_5_24_-2.31887058418299_3.48442089768323_3.24127775360835-2 chr6 95718355 95718708 + 3.24127775360835 NA intron (NM_011507, intron 1 of 10) CpG 315 NM_011507 20917 Mm.371585 NM_011507 ENSMUSG00000061838 Suclg2 AF171077|AW556404|D6Wsu120e|G-SCS|GTPSCS|SCS-betaG succinate-Coenzyme A ligase, GDP-forming, beta subunit protein-coding unique_peak1_28_5_1.99700550022935_3.58346525083583_3.24127775360835-4 chr2 157069554 157069907 + 3.24127775360835 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 9535 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak2_37_67_-1.11829938670519_5.52831314789774_3.24103844268745 chr1 43221449 43222529 + 3.24103844268745 NA Intergenic Intergenic -25228 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_81_31_1.07095956760044_5.53547978380022_3.24103844268744 chr17 26621473 26622025 + 3.24103844268744 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) -54647 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_66_23_1.19659051691923_5.18325775918077_3.2376787981851 chr16 87440392 87440893 + 3.2376787981851 NA promoter-TSS (NM_016924) promoter-TSS (NM_016924) -50 NM_016924 53858 Mm.162406 NM_016924 ENSMUSG00000041079 Rwdd2b ORF5 RWD domain containing 2B protein-coding common_peak1_110_48_0.890031519596445_6.05972560391343_3.23748825288584-2 chr7 144646711 144648160 + 3.23748825288584 NA intron (NM_001242349, intron 8 of 24) intron (NM_001242349, intron 8 of 24) -64999 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_110_48_0.890031519596445_6.05972560391343_3.23748825288584 chr6 145746893 145747815 + 3.23748825288584 NA Intergenic CpG -61029 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_77_29_1.09242820150081_5.45310469635892_3.23296565093675 chr6 120463149 120464092 + 3.23296565093675 NA intron (NM_008359, intron 1 of 12) CpG 423 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562 chr1 163381648 163382301 + 3.23080944932562 NA Intergenic Intergenic 21695 NR_132627 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562-2 chr14 54433882 54434414 + 3.23080944932562 NA intron (NM_008608, intron 1 of 9) intron (NM_008608, intron 1 of 9) 2550 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562-5 chr18 31789178 31789454 + 3.23080944932562 NA intron (NM_027002, intron 1 of 3) intron (NM_027002, intron 1 of 3) 191 NM_027002 69241 Mm.279898 NM_027002 ENSMUSG00000024258 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D protein-coding common_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562 chr17 34587843 34588241 + 3.23080944932562 NA 3' UTR (NM_010929, exon 30 of 30) 3' UTR (NM_010929, exon 30 of 30) -1764 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562-3 chr15 83567676 83568023 + 3.23080944932562 NA intron (NM_009775, intron 1 of 3) intron (NM_009775, intron 1 of 3) 4276 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562-6 chr2 153139664 153139900 + 3.23080944932562 NA intron (NM_001172117, intron 10 of 12) intron (NM_001172117, intron 10 of 12) -21519 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562-4 chr16 8861366 8861983 + 3.23080944932562 NA Intergenic Intergenic 31574 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak1_33_7_1.80983085733645_3.90491542866823_3.23080944932562-7 chr4 107604685 107605023 + 3.23080944932562 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 78735 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding unique_peak2_7_28_-2.12088597133653_3.79753800945931_3.23080944932561 chr16 43303605 43304084 + 3.23080944932561 NA intron (NM_181058, intron 2 of 6) intron (NM_181058, intron 2 of 6) 56560 NM_019778 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288 zinc finger and BTB domain containing 20 protein-coding common_peak2_8_28_-1.95215978730838_3.88190110147338_3.23080944932561 chr11 97699852 97700118 + 3.23080944932561 NA promoter-TSS (NM_001163307) promoter-TSS (NM_001163307) -337 NM_001163308 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding unique_peak2_7_28_-2.12088597133653_3.79753800945931_3.23080944932561-2 chr2 104449457 104450075 + 3.23080944932561 NA intron (NM_010434, intron 2 of 15) intron (NM_010434, intron 2 of 15) -20826 NR_035432 100316678 NR_035432 ENSMUSG00000084516 Mir1902 Mirn1902|mmu-mir-1902 microRNA 1902 ncRNA unique_peak2_7_28_-2.12088597133653_3.79753800945931_3.23080944932561-3 chr7 98572366 98572957 + 3.23080944932561 NA Intergenic Intergenic 78439 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_8_28_-1.95215978730838_3.88190110147338_3.23080944932561 chr14 26442414 26442887 + 3.23080944932561 NA intron (NM_001347494, intron 10 of 19) intron (NM_001347494, intron 10 of 19) 85103 NR_038005 71106 Mm.158564 NR_038005 ENSMUSG00000021874 4933413J09Rik GCSE RIKEN cDNA 4933413J09 gene ncRNA common_peak1_70_25_1.16418102356564_5.28253022992391_3.23036181201156 chr3 137918589 137919261 + 3.23036181201156 NA intron (NM_019920, intron 2 of 6) intron (NM_019920, intron 2 of 6) 370 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding unique_peak1_73_27_1.11655083942659_5.3656303417709_3.22913603282893 chr12 27999843 28000721 + 3.22913603282893 NA Intergenic Intergenic 548055 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding common_peak2_32_61_-1.18713032598912_5.36063114739232_3.22913603282891 chr12 80329377 80330387 + 3.22913603282891 NA Intergenic Intergenic 61795 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_31_6_1.91563014258695_3.76516999335108_3.22740510021752 chr14 70170928 70171388 + 3.22740510021752 NA intron (NM_145978, intron 6 of 9) intron (NM_145978, intron 6 of 9) 5657 NM_001253736 213019 Mm.283968 NM_145978 ENSMUSG00000022090 Pdlim2 4732462F18Rik|Slim PDZ and LIM domain 2 protein-coding unique_peak1_30_6_1.87014959706842_3.74242972059182_3.22740510021752-4 chr9 22388196 22388760 + 3.22740510021752 NA intron (NM_028390, intron 1 of 23) intron (NM_028390, intron 1 of 23) 728 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding unique_peak2_6_26_-2.20907844922505_3.65034827755094_3.22740510021752 chr9 35031820 35032237 + 3.22740510021752 NA intron (NM_001190912, intron 14 of 15) intron (NM_001190912, intron 14 of 15) -84700 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_31_6_1.91563014258695_3.76516999335108_3.22740510021752-2 chr3 93538737 93539107 + 3.22740510021752 NA Intergenic Intergenic -16195 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak1_31_6_1.91563014258695_3.76516999335108_3.22740510021752-3 chr4 147993622 147994105 + 3.22740510021752 NA Intergenic Intergenic -6859 NM_008725 230899 Mm.482123 NM_008725 ENSMUSG00000041616 Nppa ANP|Anf|Pnd natriuretic peptide type A protein-coding unique_peak1_30_6_1.87014959706842_3.74242972059182_3.22740510021752-3 chr6 87869271 87869686 + 3.22740510021752 NA Intergenic ID4_|SINE|ID -18372 NM_001355195 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding unique_peak1_30_6_1.87014959706842_3.74242972059182_3.22740510021752 chr14 122534497 122534899 + 3.22740510021752 NA intron (NM_144844, intron 1 of 23) intron (NM_144844, intron 1 of 23) 370 NM_144844 110821 Mm.23876 NM_144844 ENSMUSG00000041650 Pcca C79630 propionyl-Coenzyme A carboxylase, alpha polypeptide protein-coding common_peak2_6_26_-2.20907844922505_3.65034827755094_3.22740510021752 chr9 9237377 9237820 + 3.22740510021752 NA intron (NR_045754, intron 2 of 3) intron (NR_045754, intron 2 of 3) 1310 NR_045754 100579151 Mm.412450 NR_045754 ENSMUSG00000085253 Gm16833 - predicted gene, 16833 ncRNA common_peak1_30_6_1.87014959706842_3.74242972059182_3.22740510021752 chr2 122765360 122765792 + 3.22740510021752 NA intron (NM_001162503, intron 1 of 9) intron (NM_001162503, intron 1 of 9) 217 NM_001162503 59010 Mm.28986 NM_021507 ENSMUSG00000005803 Sqor 0610039J17Rik|4930557M22Rik|Sqrdl sulfide quinone oxidoreductase protein-coding unique_peak1_31_6_1.91563014258695_3.76516999335108_3.22740510021752-4 chr6 70791620 70792075 + 3.22740510021752 NA intron (NM_009075, intron 1 of 8) CpG 328 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding unique_peak1_30_6_1.87014959706842_3.74242972059182_3.22740510021752-2 chr4 149995060 149995268 + 3.22740510021752 NA intron (NM_001291004, intron 2 of 4) intron (NM_001291004, intron 2 of 4) 8072 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_30_6_1.87014959706842_3.74242972059182_3.22740510021752-5 chr9 43012123 43012568 + 3.22740510021752 NA intron (NM_001359232, intron 11 of 40) AT_rich|Low_complexity|Low_complexity -67974 NM_175481 110637 Mm.370291 NM_175481 ENSMUSG00000032017 Grik4 6330551K01Rik|GluK4|GluRgamma1|KA-1|KA1 glutamate receptor, ionotropic, kainate 4 protein-coding common_peak2_96_132_-0.743671881090112_6.68344649495613_3.22306014406787 chr1 193413149 193415187 + 3.22306014406787 NA Intergenic Intergenic -43886 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_456_277_0.413031090082244_8.32545661776463_3.21390153325089 chr19 41981687 41984075 + 3.21390153325089 NA intron (NM_145500, intron 1 of 2) MIR3|SINE|MIR 1118 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak1_56_18_1.30207154332902_4.89896328510809_3.21211594687538 chr8 104384360 104384926 + 3.21211594687538 NA intron (NM_153582, intron 1 of 3) B1_Mur4|SINE|Alu 11164 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak2_21_47_-1.39873211855085_4.88559644144573_3.21211594687538 chr19 11964838 11965235 + 3.21211594687538 NA promoter-TSS (NM_001033174) promoter-TSS (NM_001033174) -808 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_107_46_0.910903019649277_6.01004036150228_3.20834184032052 chr5 24586733 24587999 + 3.20834184032052 NA 5' UTR (NM_133913, exon 1 of 4) 5' UTR (NM_133913, exon 1 of 4) 616 NM_133913 100910 Mm.140672 NM_133913 ENSMUSG00000038181 Chpf2 2010209O12Rik|AW060945|Gm42230|mKIAA1402|mir-671 chondroitin polymerizing factor 2 protein-coding common_peak1_106_46_0.897577185351521_6.0033774443534_3.20834184032052 chr15 74954168 74954934 + 3.20834184032052 NA promoter-TSS (NM_001164036) promoter-TSS (NM_001164036) -500 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_44_12_1.51092842928549_4.45590393278384_3.2055306048522-2 chr2 31770979 31771359 + 3.2055306048522 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 10996 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak1_44_12_1.51092842928549_4.45590393278384_3.2055306048522 chr14 48225363 48225887 + 3.2055306048522 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 26909 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_13_37_-1.70917344007842_4.39334079340438_3.20553060485219-3 chr19 24699269 24699675 + 3.20553060485219 NA intron (NM_175013, intron 10 of 10) intron (NM_175013, intron 10 of 10) 25464 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak2_13_37_-1.70917344007842_4.39334079340438_3.20553060485219 chr13 113842912 113843464 + 3.20553060485219 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 48680 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding unique_peak2_13_37_-1.70917344007842_4.39334079340438_3.20553060485219-2 chr17 79169915 79170769 + 3.20553060485219 NA Intergenic Intergenic 118436 NM_001316729 70536 Mm.293870 NM_027455 ENSMUSG00000024084 Qpct 5730422A13Rik glutaminyl-peptide cyclotransferase (glutaminyl cyclase) protein-coding unique_peak2_14_37_-1.61033998867121_4.44275751910798_3.20553060485219 chr10 108444324 108444774 + 3.20553060485219 NA Intergenic Intergenic 112360 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak2_49_81_-0.995253142465775_5.8599254333852_3.20221477903022 chr5 143328647 143329601 + 3.20221477903022 NA promoter-TSS (NR_027874) promoter-TSS (NR_027874) 114 NM_001359445 72881 Mm.261606 NM_028379 ENSMUSG00000001844 Zdhhc4 1810021D01Rik|2900029I10Rik|DHHC-4 zinc finger, DHHC domain containing 4 protein-coding common_peak1_112_49_0.886466511885527_6.08708944571749_3.19445253706502 chr15 74620590 74621397 + 3.19445253706502 NA intron (NM_001177437, intron 12 of 26) intron (NM_001177437, intron 12 of 26) 15325 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak2_111_49_0.873732944870712_6.08072266221008_3.19445253706502 chr13 55361988 55362821 + 3.19445253706502 NA exon (NM_025828, exon 1 of 8) exon (NM_025828, exon 1 of 8) 379 NM_025828 66890 Mm.38868 NM_025828 ENSMUSG00000021484 Lman2 1110003H06Rik|1300009F09Rik|AA408240|AL023023|AU040819|GP36B|VIP36 lectin, mannose-binding 2 protein-coding unique_peak1_50_15_1.39066645956391_4.69533322978195_3.19271205772594 chr5 137671425 137671893 + 3.19271205772594 NA intron (NM_001303271, intron 1 of 12) intron (NM_001303271, intron 1 of 12) 13094 NM_001303271 231801 Mm.260869 NM_145566 ENSMUSG00000029722 Agfg2 A630095P14Rik|Hrbl|RAB-R|RABR ArfGAP with FG repeats 2 protein-coding common_peak1_50_15_1.39066645956391_4.69533322978195_3.19271205772594 chr5 117363701 117363987 + 3.19271205772594 NA intron (NM_021539, intron 2 of 8) intron (NM_021539, intron 2 of 8) 6539 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding unique_peak1_60_20_1.25483864652412_5.01973674604082_3.18536702122524 chr19 44314431 44315390 + 3.18536702122524 NA Intergenic Intergenic 11739 NR_039574 100628619 NR_039574 ENSMUSG00000093315 Mir5114 mmu-mir-5114|mu-mir-5114 microRNA 5114 ncRNA common_peak2_102_138_-0.721353707665281_6.75826421889087_3.18210265759476 chr5 120612337 120614028 + 3.18210265759476 NA promoter-TSS (NM_028041) promoter-TSS (NM_028041) 52 NM_028041 71990 Mm.24495 NM_028041 ENSMUSG00000029599 Ddx54 2410015A15Rik|AI414901|DP97 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 protein-coding common_peak1_103_44_0.919575118978949_5.95164065581915_3.18035325882156 chr17 12317978 12319384 + 3.18035325882156 NA promoter-TSS (NR_045290) promoter-TSS (NR_045290) -21 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding common_peak2_52_85_-0.980494699432238_5.93601740498598_3.18035325882156 chr14 32084856 32085595 + 3.18035325882156 NA promoter-TSS (NR_104305) promoter-TSS (NR_104305) 61 NR_104305 105638 Mm.2519 NM_172254 ENSMUSG00000021905 Dph3 DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2 diphthamine biosynthesis 3 protein-coding common_peak2_46_78_-1.03011944487505_5.78872102573958_3.17869234793979-2 chr9 65549472 65550348 + 3.17869234793979 NA Intergenic Intergenic 30177 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_46_78_-1.03011944487505_5.78872102573958_3.17869234793979 chr17 33999004 34000302 + 3.17869234793979 NA intron (NM_001001892, intron 2 of 7) CpG-6270 680 NM_001001892 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding common_peak1_126_58_0.814996572212074_6.29014133546788_3.17674785104626 chr19 41994723 41996534 + 3.17674785104626 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 13865 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak2_444_269_0.417038568956485_8.28533488152907_3.16990488010496 chr14 76504763 76507720 + 3.16990488010496 NA intron (NM_001310647, intron 2 of 2) intron (NM_001310647, intron 2 of 2) 1731 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak2_63_22_1.19236812901429_5.11974602056416_3.16860498301544 chr11 72506040 72506694 + 3.16860498301544 NA intron (NM_029932, intron 8 of 11) intron (NM_029932, intron 8 of 11) -16447 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_64_22_1.21457813757873_5.13085102484638_3.16860498301544 chr3 102204249 102204639 + 3.16860498301544 NA intron (NM_177545, intron 1 of 7) CpG 249 NM_177545 229658 Mm.118004 NM_177545 ENSMUSG00000027860 Vangl1 Kitenin|Lpp2|Stb2|Stbm VANGL planar cell polarity 1 protein-coding unique_peak1_63_22_1.19236812901429_5.11974602056416_3.16860498301544 chr9 108796098 108796725 + 3.16860498301544 NA intron (NM_029634, intron 1 of 5) intron (NM_029634, intron 1 of 5) 417 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak1_63_22_1.19236812901429_5.11974602056416_3.16860498301544 chr8 64613834 64614552 + 3.16860498301544 NA intron (NM_013494, intron 3 of 8) intron (NM_013494, intron 3 of 8) 78916 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_35_65_-1.15268287068575_5.46805268401558_3.16814290467713 chr4 141147524 141148379 + 3.16814290467713 NA promoter-TSS (NM_172518) promoter-TSS (NM_172518) 29 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding common_peak1_237_129_0.575012134735639_7.30987388039627_3.16091211725065 chr19 46506406 46509979 + 3.16091211725065 NA intron (NM_053100, intron 1 of 5) intron (NM_053100, intron 1 of 5) 6544 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_33_62_-1.16744906616347_5.39355539041818_3.16061338235695 chr12 54696023 54696789 + 3.16061338235695 NA promoter-TSS (NM_001331162) promoter-TSS (NM_001331162) -512 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_287_162_0.521818155721895_7.60963723209202_3.15955764197734 chr6 52231925 52234318 + 3.15955764197734 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 1818 NM_008263 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding unique_peak1_42_11_1.56128002948828_4.36560251546529_3.15925062785482 chr11 95080567 95081277 + 3.15925062785482 NA Intergenic Intergenic -4111 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding unique_peak1_41_11_1.52757219529822_4.34874859837027_3.15925062785482-3 chr17 35865413 35865955 + 3.15925062785482 NA promoter-TSS (NM_175242) promoter-TSS (NM_175242) 89 NM_001146711 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding unique_peak1_41_11_1.52757219529822_4.34874859837027_3.15925062785482 chr14 63982452 63983069 + 3.15925062785482 NA intron (NM_026359, intron 2 of 3) intron (NM_026359, intron 2 of 3) 5020 NM_026359 67750 Mm.33864 NM_026359 ENSMUSG00000021961 4930578I06Rik AI429111 RIKEN cDNA 4930578I06 gene protein-coding unique_peak1_42_11_1.56128002948828_4.36560251546529_3.15925062785482-2 chr11 117312350 117312988 + 3.15925062785482 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -19046 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_41_11_1.52757219529822_4.34874859837027_3.15925062785482-2 chr16 13402752 13403547 + 3.15925062785482 NA intron (NM_153588, intron 10 of 14) intron (NM_153588, intron 10 of 14) 44728 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_41_11_1.52757219529822_4.34874859837027_3.15925062785482 chr3 131302665 131303130 + 3.15925062785482 NA exon (NM_027816, exon 1 of 5) exon (NM_027816, exon 1 of 5) 330 NM_027816 71519 Mm.473179 NM_027816 ENSMUSG00000027983 Cyp2u1 8430436A10Rik cytochrome P450, family 2, subfamily u, polypeptide 1 protein-coding common_peak1_90_37_0.972214731012413_5.73403487894979_3.15702951582588-2 chr8 92355542 92356532 + 3.15702951582588 NA promoter-TSS (NR_033641) promoter-TSS (NR_033641) 83 NR_110452 71296 Mm.86664 NR_033641 ENSMUSG00000031736 Crnde 4933436C20Rik colorectal neoplasia differentially expressed (non-protein coding) ncRNA common_peak1_90_37_0.972214731012413_5.73403487894979_3.15702951582588 chr2 165868417 165869627 + 3.15702951582588 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 9415 NM_001291158 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_90_37_0.972214731012413_5.73403487894979_3.15702951582588 chr12 76563021 76563808 + 3.15702951582588 NA intron (NM_153804, intron 3 of 18) intron (NM_153804, intron 3 of 18) -15489 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_44_75_-1.036559366017_5.72964783043508_3.15702951582587 chr11 95098120 95098659 + 3.15702951582587 NA Intergenic Intergenic -21578 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_170_85_0.697514924724715_6.77502221706446_3.1558588385774 chr3 90508669 90509841 + 3.1558588385774 NA 5' UTR (NM_001293781, exon 1 of 4) 5' UTR (NM_001293781, exon 1 of 4) 243 NM_001293776 66511 Mm.154136 NM_023215 ENSMUSG00000001017 Chtop 2500003M10Rik|Fop|Srag chromatin target of PRMT1 protein-coding common_peak2_20_45_-1.40397228046439_4.82157581582482_3.1487997612602 chr8 25009905 25010621 + 3.1487997612602 NA intron (NM_001270996, intron 1 of 21) B1_Mur2|SINE|Alu 6659 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding unique_peak2_20_45_-1.40397228046439_4.82157581582482_3.1487997612602 chr16 11017875 11018335 + 3.1487997612602 NA Intergenic Intergenic 9207 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak1_54_17_1.32890729990863_4.83437865139663_3.14879976126019 chr4 146270395 146270755 + 3.14879976126019 NA intron (NM_001083918, intron 1 of 6).2 intron (NM_001083918, intron 1 of 6).2 190 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding common_peak1_54_17_1.32890729990863_4.83437865139663_3.14879976126019-2 chr7 145221818 145222788 + 3.14879976126019 NA intron (NR_132644, intron 24 of 24) intron (NR_132644, intron 24 of 24) -14184 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_54_17_1.32890729990863_4.83437865139663_3.14879976126019 chr5 4222575 4223442 + 3.14879976126019 NA Intergenic Intergenic 30641 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b Gm9897 mitochondrial transcription termination factor 1b protein-coding common_peak2_153_75_0.72585195915436_6.61085349302077_3.14193502179643 chr19 5041035 5041946 + 3.14193502179643 NA TTS (NM_175383) TTS (NM_175383) 136 NM_134155 107392 Mm.29628 NM_134155 ENSMUSG00000080268 Brms1 AV003220|AW554636 breast cancer metastasis-suppressor 1 protein-coding common_peak1_153_75_0.72585195915436_6.61085349302077_3.14193502179643 chr16 85150503 85152488 + 3.14193502179643 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 22212 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_122_56_0.818905155663152_6.24234259199632_3.14148215105348 chr3 89714763 89715721 + 3.14148215105348 NA promoter-TSS (NM_001357958) promoter-TSS (NM_001357958) 4 NM_001357958 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding common_peak2_99_135_-0.732218958671275_6.7213533619147_3.14057145190753 chr4 56801787 56803268 + 3.14057145190753 NA promoter-TSS (NM_026079) promoter-TSS (NM_026079) -196 NM_026079 230233 Mm.282743 NM_026079 ENSMUSG00000028431 Ikbkap 3110040G09Rik|6030413P05|C78473|Elp1|IKAP inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein protein-coding unique_peak1_47_14_1.39693007126349_4.60535563124026_3.13557888369249-2 chr18 39699388 39700063 + 3.13557888369249 NA Intergenic Intergenic -73772 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_48_14_1.42646754775754_4.62012436948729_3.13557888369249 chr13 119690437 119690789 + 3.13557888369249 NA intron (NM_001291439, intron 1 of 9) CpG 262 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding unique_peak1_47_14_1.39693007126349_4.60535563124026_3.13557888369249 chr13 38349299 38349667 + 3.13557888369249 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 3767 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding unique_peak1_47_14_1.39693007126349_4.60535563124026_3.13557888369249-3 chr3 15205767 15206136 + 3.13557888369249 NA Intergenic Intergenic 126351 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_48_14_1.42646754775754_4.62012436948729_3.13557888369249 chr14 54259313 54259725 + 3.13557888369249 NA intron (NM_134076, intron 1 of 6) intron (NM_134076, intron 1 of 6) 287 NM_134076 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding unique_peak1_48_14_1.42646754775754_4.62012436948729_3.13557888369249-2 chr6 55434288 55435153 + 3.13557888369249 NA Intergenic Intergenic -17258 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding common_peak2_54_86_-0.944111194497789_5.97088789859983_3.13484962357771 chr18 33461643 33462534 + 3.13484962357771 NA intron (NM_001109988, intron 2 of 4) intron (NM_001109988, intron 2 of 4) 1546 NM_001267717 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding common_peak1_194_101_0.639495374318463_6.99217302913073_3.13435991488511 chr11 32221193 32222710 + 3.13435991488511 NA intron (NM_010117, intron 1 of 17) CpG 342 NM_010117 13650 Mm.11545 NM_010117 ENSMUSG00000020282 Rhbdf1 C16ORF8|Dist|Dist1|Egfr-rs|mKIAA4242 rhomboid 5 homolog 1 protein-coding common_peak1_160_79_0.715529276909777_6.67969273334225_3.12635713382698 chr12 108392683 108393761 + 3.12635713382698 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -17411 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_143_180_-0.622244597556989_7.18872358830471_3.12264978952424 chr19 46056326 46057860 + 3.12264978952424 NA intron (NM_001346801, intron 1 of 13) CpG 554 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding common_peak2_109_145_-0.698047237102323_6.84080094032886_3.12231751645212 chr8 124642802 124643918 + 3.12231751645212 NA intron (NM_175149, intron 2 of 3) intron (NM_175149, intron 2 of 3) 20009 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak1_109_48_0.877067477662486_6.05324358294645_3.12126071749017 chr14 56811990 56812936 + 3.12126071749017 NA promoter-TSS (NM_001253753) promoter-TSS (NM_001253753) 474 NR_152252 100503842 Mm.297636 NR_152252 ENSMUSG00000100017 2410022M11Rik - RIKEN cDNA 2410022M11 gene ncRNA common_peak1_58_19_1.27747299043532_4.96066459010502_3.1189257363273 chr14 72709313 72709963 + 3.1189257363273 NA intron (NM_207636, intron 1 of 25) CpG 365 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding unique_peak1_58_19_1.27747299043532_4.96066459010502_3.1189257363273 chr13 111686832 111687648 + 3.1189257363273 NA intron (NM_172593, intron 1 of 12) CpG 1062 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding common_peak1_57_19_1.2529849264899_4.94842055813231_3.1189257363273 chr1 171287499 171287900 + 3.1189257363273 NA TTS (NM_001360931) TTS (NM_001360931) 262 NM_013919 30941 Mm.27510 NM_013919 ENSMUSG00000053483 Usp21 ESTM28|Usp16|Usp23|W53272 ubiquitin specific peptidase 21 protein-coding unique_peak1_57_19_1.2529849264899_4.94842055813231_3.1189257363273 chr13 13637888 13638503 + 3.1189257363273 NA exon (NM_010748, exon 6 of 53) exon (NM_010748, exon 6 of 53) 47786 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-8 chr2 166482917 166483180 + 3.11807310444576 NA Intergenic Intergenic 35597 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576 chr11 83890963 83891241 + 3.11807310444576 NA intron (NM_009330, intron 6 of 8) intron (NM_009330, intron 6 of 8) 38142 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-7 chr2 75772449 75772833 + 3.11807310444576 NA Intergenic MER115|DNA|hAT-Tip100 -59536 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-13 chr8 108796477 108796779 + 3.11807310444576 NA intron (NM_007496, intron 2 of 9) intron (NM_007496, intron 2 of 9) 81984 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-2 chr12 99391717 99391991 + 3.11807310444576 NA intron (NM_183186, intron 1 of 5) intron (NM_183186, intron 1 of 5) 58220 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak2_2_19_-2.98988750972238_2.82698434002617_3.11807310444576 chr1 82604401 82604657 + 3.11807310444576 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 17608 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-11 chr6 31318737 31319006 + 3.11807310444576 NA intron (NR_040261, intron 3 of 4) intron (NR_040261, intron 3 of 4) 79902 NR_040300 100503869 Mm.370532 NR_040300 ENSMUSG00000086212 Mkln1os Gm13845 muskelin 1, intracellular mediator containing kelch motifs, opposite strand ncRNA unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-5 chr14 121242147 121242611 + 3.11807310444576 NA intron (NM_134082, intron 11 of 26) intron (NM_134082, intron 11 of 26) -6327 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-4 chr14 70159062 70159494 + 3.11807310444576 NA intron (NM_001112735, intron 1 of 6) intron (NM_001112735, intron 1 of 6) 224 NM_001112735 268759 Mm.12148 NM_001004155 ENSMUSG00000044551 9930012K11Rik - RIKEN cDNA 9930012K11 gene protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-12 chr8 108742907 108743269 + 3.11807310444576 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 28444 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak2_2_19_-2.98988750972238_2.82698434002617_3.11807310444576-3 chr8 61831397 61831811 + 3.11807310444576 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 71086 NM_001081390 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-3 chr13 3892480 3892829 + 3.11807310444576 NA intron (NM_019671, intron 3 of 11) intron (NM_019671, intron 3 of 11) 927 NM_001047159 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding unique_peak2_2_19_-2.98988750972238_2.82698434002617_3.11807310444576-2 chr10 66353596 66353883 + 3.11807310444576 NA Intergenic Intergenic 208443 NR_131070 77198 Mm.107617 NR_131070 ENSMUSG00000112210 4930407I19Rik - RIKEN cDNA 4930407I19 gene ncRNA unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-10 chr4 133278000 133278233 + 3.11807310444576 NA promoter-TSS (NR_110978) promoter-TSS (NR_110978) -326 NR_110978 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-9 chr2 173335259 173335589 + 3.11807310444576 NA Intergenic Intergenic -58891 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_22_3_2.2499082813695_3.12495414068475_3.11807310444576-6 chr17 25641679 25642121 + 3.11807310444576 NA intron (NR_045520, intron 3 of 8) intron (NR_045520, intron 3 of 8) 62726 NR_045520 76483 Mm.12787 NM_029624 ENSMUSG00000002279 Lmf1 2400010G15Rik|AW822050|Tmem112|cld lipase maturation factor 1 protein-coding unique_peak1_39_10_1.58321034476113_4.25103679101786_3.11713623526325-3 chr7 101330474 101331012 + 3.11713623526325 NA intron (NM_019990, intron 2 of 6) intron (NM_019990, intron 2 of 6) 9630 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding unique_peak1_39_10_1.58321034476113_4.25103679101786_3.11713623526325 chr10 42678953 42679335 + 3.11713623526325 NA exon (NM_172416, exon 1 of 6) exon (NM_172416, exon 1 of 6) 228 NM_172416 14628 Mm.46636 NM_172416 ENSMUSG00000038280 Ostm1 1200002H13Rik|HSPC019|gl osteopetrosis associated transmembrane protein 1 protein-coding unique_peak1_39_10_1.58321034476113_4.25103679101786_3.11713623526325-2 chr3 52401501 52401836 + 3.11713623526325 NA Intergenic Intergenic -115296 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA unique_peak2_11_33_-1.76953221523184_4.20269673363442_3.11713623526324 chr10 4132240 4132752 + 3.11713623526324 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 80624 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA unique_peak2_11_33_-1.76953221523184_4.20269673363442_3.11713623526324-2 chr10 128256598 128256979 + 3.11713623526324 NA TTS (NM_133996) TTS (NM_133996) 2657 NM_133996 28194 Mm.439846 NM_133996 ENSMUSG00000051716 Apon AI195275|D10Ucla2 apolipoprotein N protein-coding common_peak2_79_114_-0.809903067119189_6.44053851738478_3.11443109470669 chr8 35592637 35593688 + 3.11443109470669 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -4142 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_166_83_0.697554949247784_6.74109489740265_3.11411110165362 chr3 65528473 65529566 + 3.11411110165362 NA non-coding (NR_027955, exon 2 of 2) non-coding (NR_027955, exon 2 of 2) 395 NR_027955 71004 Mm.475465 NM_001033527 ENSMUSG00000074580 4931440P22Rik - RIKEN cDNA 4931440P22 gene ncRNA common_peak2_65_98_-0.869345615255095_6.19468381245206_3.10678241728852 chr8 120015436 120016866 + 3.10678241728852 NA intron (NM_001310635, intron 5 of 14) intron (NM_001310635, intron 5 of 14) 23713 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak1_119_54_0.835062872527981_6.19889114978865_3.1067824172885 chr18 33794886 33796002 + 3.1067824172885 NA TTS (NM_013512) TTS (NM_013512) 552 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA common_peak2_51_83_-0.973834227896892_5.90540030883031_3.10674602164905 chr11 79703575 79704466 + 3.10674602164905 NA Intergenic ID_B1|SINE|B4 -7949 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA common_peak2_100_43_0.910066280620116_5.91446475894736_3.10674602164904 chr14 45478541 45479416 + 3.10674602164904 NA intron (NM_001360525, intron 4 of 15) intron (NM_001360525, intron 4 of 15) 51087 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_101_43_0.924179861353364_5.92152154931398_3.10674602164904-2 chr19 5423955 5424781 + 3.10674602164904 NA promoter-TSS (NM_001256515) promoter-TSS (NM_001256515) 611 NM_024176 66556 Mm.275446 NM_024176 ENSMUSG00000024914 Drap1 2310074H19Rik|NC2-alpha Dr1 associated protein 1 (negative cofactor 2 alpha) protein-coding common_peak1_101_43_0.924179861353364_5.92152154931398_3.10674602164904 chr14 45329839 45330581 + 3.10674602164904 NA intron (NM_025959, intron 1 of 13) intron (NM_025959, intron 1 of 13) 386 NM_025959 67089 Mm.18472 NM_025959 ENSMUSG00000021832 Psmc6 2300001E01Rik|AI451058 proteasome (prosome, macropain) 26S subunit, ATPase, 6 protein-coding common_peak2_37_66_-1.09692573591262_5.51762632250146_3.10619360587018 chr11 101645894 101646388 + 3.10619360587018 NA Intergenic CpG 18192 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_79_31_1.03558698382519_5.51779349191259_3.10619360587017 chr14 121248779 121249712 + 3.10619360587017 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 539 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_79_31_1.03558698382519_5.51779349191259_3.10619360587017 chr10 8810535 8811264 + 3.10619360587017 NA intron (NM_175155, intron 4 of 19) intron (NM_175155, intron 4 of 19) 75171 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding common_peak1_79_31_1.03558698382519_5.51779349191259_3.10619360587017-2 chr3 107776702 107777463 + 3.10619360587017 NA Intergenic Intergenic -16613 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_45_76_-1.02393323889865_5.75481992124558_3.1049061337789 chr1 106400215 106400826 + 3.1049061337789 NA Intergenic Intergenic 146111 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_92_38_0.965882922917988_5.76834368032124_3.1049061337789 chr2 30416172 30416950 + 3.1049061337789 NA promoter-TSS (NM_007760) promoter-TSS (NM_007760) 511 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak2_69_102_-0.84219951421066_6.26540077007789_3.10474083233279 chr15 74675978 74677328 + 3.10474083233279 NA Intergenic Intergenic -4083 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak1_150_73_0.736144538628089_6.57752563494299_3.1016166557742-2 chr3 89962749 89963967 + 3.1016166557742 NA promoter-TSS (NM_001081182) promoter-TSS (NM_001081182) -26 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak1_150_73_0.736144538628089_6.57752563494299_3.1016166557742 chr10 70094869 70095929 + 3.1016166557742 NA Intergenic Intergenic -1722 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-13 chr14 67717323 67717561 + 3.1004765869889 NA intron (NM_001111028, intron 1 of 11) intron (NM_001111028, intron 1 of 11) 1344 NM_001285933 105440 Mm.6720 NM_134073 ENSMUSG00000034327 Kctd9 - potassium channel tetramerisation domain containing 9 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-63 chr8 128447280 128447467 + 3.1004765869889 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 88132 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889 chr1 20458566 20458812 + 3.1004765869889 NA intron (NM_153179, intron 35 of 66) intron (NM_153179, intron 35 of 66) 102235 NR_045734 75028 Mm.417820 NR_045734 ENSMUSG00000089914 4930486I03Rik - RIKEN cDNA 4930486I03 gene ncRNA unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-8 chr2 31460171 31460496 + 3.1004765869889 NA Intergenic CpG -9937 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-11 chr4 140617440 140617751 + 3.1004765869889 NA intron (NM_001290803, intron 1 of 28) intron (NM_001290803, intron 1 of 28) 31161 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-36 chr3 89964752 89964944 + 3.1004765869889 NA Intergenic Intergenic -1516 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-16 chr15 13219061 13219263 + 3.1004765869889 NA Intergenic Intergenic -45487 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-14 chr13 5712971 5713187 + 3.1004765869889 NA Intergenic (CCAA)n|Simple_repeat|Simple_repeat 145013 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-56 chr8 26816626 26816846 + 3.1004765869889 NA intron (NR_045904, intron 1 of 2) intron (NR_045904, intron 1 of 2) 7687 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-7 chr11 80483901 80484130 + 3.1004765869889 NA 3' UTR (NM_177390, exon 22 of 22) 3' UTR (NM_177390, exon 22 of 22) 6992 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-39 chr8 10023427 10023733 + 3.1004765869889 NA intron (NM_033622, intron 4 of 6) intron (NM_033622, intron 4 of 6) 16947 NM_033622 24099 Mm.28835 NM_033622 ENSMUSG00000031497 Tnfsf13b BAFF|BLyS|D8Ertd387e|TALL-1|TALL1|THANK|TNFSF20|Tnlg7a|zTNF4 tumor necrosis factor (ligand) superfamily, member 13b protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-15 chr8 110797144 110797381 + 3.1004765869889 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 8662 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-15 chr14 51885371 51885558 + 3.1004765869889 NA exon (NM_001029990, exon 3 of 14) exon (NM_001029990, exon 3 of 14) 622 NM_001029990 52535 Mm.5750 NM_001029990 ENSMUSG00000004561 Mettl17 2310032K15Rik|D14Ertd209e|Mett11d1 methyltransferase like 17 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-9 chr11 57157506 57157708 + 3.1004765869889 NA intron (NM_008165, intron 2 of 15) intron (NM_008165, intron 2 of 15) 144561 NM_001252403 14799 Mm.4920 NM_008165 ENSMUSG00000020524 Gria1 2900051M01Rik|Glr-1|Glr1|GluA1|GluR-A|GluRA|Glur-1|Glur1|HIPA1|gluR-K1 glutamate receptor, ionotropic, AMPA1 (alpha 1) protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-28 chr18 74921296 74921609 + 3.1004765869889 NA Intergenic Intergenic 39811 NM_010720 16891 Mm.299647 NM_010720 ENSMUSG00000053846 Lipg 3110013K01Rik|EL|lipase|mEDL lipase, endothelial protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-41 chr9 21452767 21452976 + 3.1004765869889 NA intron (NM_001357721, intron 1 of 19) intron (NM_001357721, intron 1 of 19) 27963 NM_001357719 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-35 chr6 100715585 100715826 + 3.1004765869889 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 10971 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-2 chr11 33866721 33867009 + 3.1004765869889 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -23280 NM_001290690 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-3 chr1 93184966 93185280 + 3.1004765869889 NA intron (NM_001310428, intron 5 of 31) intron (NM_001310428, intron 5 of 31) 16700 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-24 chr2 6546952 6547351 + 3.1004765869889 NA exon (NM_001110230, exon 14 of 15) exon (NM_001110230, exon 14 of 15) 174511 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-8 chr12 80360935 80361190 + 3.1004765869889 NA intron (NM_177267, intron 7 of 8) intron (NM_177267, intron 7 of 8) 30615 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-32 chr2 70068699 70068898 + 3.1004765869889 NA intron (NM_177376, intron 2 of 34) intron (NM_177376, intron 2 of 34) 29672 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-24 chr18 13249549 13249929 + 3.1004765869889 NA Intergenic Intergenic 242749 NM_153087 225192 Mm.207073 NM_153087 ENSMUSG00000037346 Hrh4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-21 chr15 62264279 62264521 + 3.1004765869889 NA Intergenic (T)n|Simple_repeat|Simple_repeat -44949 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-66 chr9 119339206 119339495 + 3.1004765869889 NA intron (NM_010851, intron 1 of 5) intron (NM_010851, intron 1 of 5) 690 NM_010851 17874 Mm.213003 NM_010851 ENSMUSG00000032508 Myd88 - myeloid differentiation primary response gene 88 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-7 chr17 62691424 62691781 + 3.1004765869889 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 189715 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-39 chr3 152789996 152790216 + 3.1004765869889 NA Intergenic Intergenic 76006 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-42 chr4 95049275 95049492 + 3.1004765869889 NA 3' UTR (NM_010591, exon 1 of 1) 3' UTR (NM_010591, exon 1 of 1) 2839 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-6 chr16 98082197 98082419 + 3.1004765869889 NA intron (NR_015491, intron 1 of 4) intron (NR_015491, intron 1 of 4) 131 NR_015491 320586 Mm.442230 NR_015491 A630089N07Rik - RIKEN cDNA A630089N07 gene ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-22 chr17 34268029 34268321 + 3.1004765869889 NA intron (NM_207105, intron 4 of 5) intron (NM_207105, intron 4 of 5) 4948 NM_207105 14961 Mm.254067 NM_207105 ENSMUSG00000073421 H2-Ab1 AI845868|Abeta|H-2Ab|H2-Ab|I-Abeta|IAb|Ia-2|Ia2|Rmcs1 histocompatibility 2, class II antigen A, beta 1 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-16 chr9 70322007 70322303 + 3.1004765869889 NA intron (NM_181072, intron 6 of 27) intron (NM_181072, intron 6 of 27) 83598 NR_049200 100885839 NR_049200 ENSMUSG00000093763 Mir5626 Gm25590|mir-5626|mmu-mir-5626 microRNA 5626 ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-38 chr7 100972321 100972568 + 3.1004765869889 NA Intergenic Intergenic -8078 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-3 chr1 186609527 186609721 + 3.1004765869889 NA Intergenic Intergenic -50943 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-15 chr15 3727261 3727601 + 3.1004765869889 NA Intergenic Intergenic -144079 NM_010284 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-12 chr11 115962864 115963121 + 3.1004765869889 NA intron (NM_020483, intron 9 of 10) intron (NM_020483, intron 9 of 10) -11733 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-27 chr2 136920745 136920958 + 3.1004765869889 NA intron (NM_001355671, intron 2 of 6) intron (NM_001355671, intron 2 of 6) 21500 NM_001038641 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-31 chr2 35334373 35334660 + 3.1004765869889 NA intron (NM_013515, intron 1 of 6) intron (NM_013515, intron 1 of 6) 2493 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-9 chr13 58126630 58126869 + 3.1004765869889 NA 3' UTR (NM_029872, exon 1 of 1) 3' UTR (NM_029872, exon 1 of 1) 1807 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-54 chr7 118852419 118852703 + 3.1004765869889 NA exon (NM_023197, exon 2 of 5) exon (NM_023197, exon 2 of 5) 3052 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-46 chr5 35023629 35023868 + 3.1004765869889 NA intron (NM_173402, intron 9 of 16) intron (NM_173402, intron 9 of 16) 2699 NR_037280 100526557 NR_037280 ENSMUSG00000093097 Mir3097 mir-3097|mmu-mir-3097 microRNA 3097 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-4 chr10 12816893 12817080 + 3.1004765869889 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 44749 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-64 chr9 41187150 41187383 + 3.1004765869889 NA Intergenic Intergenic -18889 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-22 chr16 93963434 93963667 + 3.1004765869889 NA intron (NM_019500, intron 1 of 2) intron (NM_019500, intron 1 of 2) -33733 NM_001165926 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-26 chr2 128904158 128904381 + 3.1004765869889 NA Intergenic Intergenic 39751 NM_020594 57432 Mm.11675 NM_020594 ENSMUSG00000027387 Zc3h8 AU020882|E130108N08Rik|Fliz1|Zc3hdc8 zinc finger CCCH type containing 8 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-9 chr2 165844292 165844510 + 3.1004765869889 NA intron (NM_001252587, intron 5 of 11) intron (NM_001252587, intron 5 of 11) 13772 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-5 chr15 74782411 74782616 + 3.1004765869889 NA Intergenic Intergenic -2939 NR_155280 102635975 Mm.420550 NR_155280 Gm33174 - predicted gene, 33174 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-53 chr7 114070340 114070557 + 3.1004765869889 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 47333 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-45 chr5 3324612 3324913 + 3.1004765869889 NA Intergenic B1_Mur3|SINE|Alu -19131 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889 chr1 87896408 87896634 + 3.1004765869889 NA intron (NM_177646, intron 3 of 29) intron (NM_177646, intron 3 of 29) -42222 NR_136921 100503175 Mm.426422 NR_136921 ENSMUSG00000101942 Gm19582 - predicted gene, 19582 ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-2 chr1 88432148 88432370 + 3.1004765869889 NA Intergenic Intergenic 25249 NM_029269 75396 Mm.173058 NM_029269 ENSMUSG00000026295 Spp2 0610038O04Rik|pp-24|spp24 secreted phosphoprotein 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-41 chr4 93552477 93552800 + 3.1004765869889 NA Intergenic Intergenic -217127 NM_026954 69136 Mm.171558 NM_026954 ENSMUSG00000054000 Tusc1 2200001D17Rik|TSG-9 tumor suppressor candidate 1 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-44 chr9 83969255 83969516 + 3.1004765869889 NA intron (NM_199195, intron 3 of 10) intron (NM_199195, intron 3 of 10) 20604 NM_199195 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-34 chr3 9496910 9497103 + 3.1004765869889 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 93928 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-33 chr5 76929360 76929563 + 3.1004765869889 NA intron (NM_172146, intron 1 of 10) intron (NM_172146, intron 1 of 10) -21841 NM_001356974 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-12 chr14 66254820 66255051 + 3.1004765869889 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 26117 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-36 chr7 25709670 25709934 + 3.1004765869889 NA Intergenic Intergenic 9251 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-40 chr8 108723763 108724082 + 3.1004765869889 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 9278 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-52 chr7 111974990 111975266 + 3.1004765869889 NA Intergenic Intergenic -48378 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-5 chr10 58812610 58812801 + 3.1004765869889 NA promoter-TSS (NM_172788) promoter-TSS (NM_172788) -654 NM_172788 237353 Mm.333078 NM_172788 ENSMUSG00000037990 Sh3rf3 4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31 SH3 domain containing ring finger 3 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-14 chr8 108767452 108767695 + 3.1004765869889 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 52929 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-4 chr1 193312102 193312314 + 3.1004765869889 NA intron (NM_008484, intron 3 of 22) C-rich|Low_complexity|Low_complexity 9965 NM_001277928 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-44 chr4 141421295 141421484 + 3.1004765869889 NA 5' UTR (NM_013868, exon 1 of 3) 5' UTR (NM_013868, exon 1 of 3) 610 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-18 chr14 121708304 121708570 + 3.1004765869889 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -10020 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-25 chr2 68934734 68934994 + 3.1004765869889 NA intron (NM_001347161, intron 2 of 10) intron (NM_001347161, intron 2 of 10) 73423 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-3 chr13 41826877 41827116 + 3.1004765869889 NA intron (NM_001145875, intron 2 of 6) intron (NM_001145875, intron 2 of 6) 20492 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-57 chr8 47969478 47969674 + 3.1004765869889 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 20975 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-40 chr4 80925109 80925353 + 3.1004765869889 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 14545 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-6 chr10 59885378 59885618 + 3.1004765869889 NA intron (NM_019965, intron 1 of 8) intron (NM_019965, intron 1 of 8) 5907 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-20 chr16 45042056 45042302 + 3.1004765869889 NA Intergenic Intergenic -51832 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-25 chr18 37879087 37879329 + 3.1004765869889 NA intron (NM_007858, intron 16 of 26) intron (NM_007858, intron 16 of 26) -24548 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-47 chr5 53997768 53998007 + 3.1004765869889 NA promoter-TSS (NM_001081103) promoter-TSS (NM_001081103) -636 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-2 chr1 92905869 92906081 + 3.1004765869889 NA Intergenic Intergenic -1014 NM_175118 67446 Mm.46179 NM_175118 ENSMUSG00000047067 Dusp28 0710001B24Rik|AV005521 dual specificity phosphatase 28 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-37 chr3 109027844 109028122 + 3.1004765869889 NA promoter-TSS (NM_001163567) promoter-TSS (NM_001163567) -376 NM_001163567 329739 Mm.69013 NM_001163567 ENSMUSG00000040339 Fam102b 1600010D10Rik|B430201A12Rik family with sequence similarity 102, member B protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-33 chr2 147006772 147007012 + 3.1004765869889 NA Intergenic MLT1B|LTR|ERVL-MaLR -6107 NM_001356403 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-21 chr16 57692692 57692903 + 3.1004765869889 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 61940 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-32 chr4 53227373 53227679 + 3.1004765869889 NA Intergenic Intergenic -18670 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-4 chr15 11787031 11787231 + 3.1004765869889 NA Intergenic Intergenic 118543 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-14 chr14 69544349 69544578 + 3.1004765869889 NA Intergenic Intergenic 10924 NR_045091 100504477 Mm.396396 NR_045091 ENSMUSG00000097511 Gm16677 - predicted gene, 16677 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-35 chr3 41178620 41178827 + 3.1004765869889 NA Intergenic Intergenic -95677 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-11 chr11 79288170 79288500 + 3.1004765869889 NA Intergenic Intergenic -33640 NM_019653 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-10 chr13 107494394 107494582 + 3.1004765869889 NA Intergenic Intergenic 24666 NR_045084 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-17 chr15 59449518 59449727 + 3.1004765869889 NA intron (NM_001164604, intron 3 of 4) ID4|SINE|ID 75424 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-31 chr3 159848479 159848669 + 3.1004765869889 NA 5' UTR (NM_001356349, exon 2 of 13) 5' UTR (NM_001356349, exon 2 of 13) 8924 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-50 chr7 63496647 63496953 + 3.1004765869889 NA intron (NM_130880, intron 1 of 13) intron (NM_130880, intron 1 of 13) 52028 NM_130880 170711 Mm.156872 NM_130880 ENSMUSG00000033510 Otud7a AJ430384|Otud7 OTU domain containing 7A protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-55 chr7 139785154 139785468 + 3.1004765869889 NA Intergenic Intergenic 6293 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-6 chr10 71138172 71138390 + 3.1004765869889 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 21409 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-43 chr4 114510176 114510402 + 3.1004765869889 NA intron (NM_001085549, intron 2 of 6) intron (NM_001085549, intron 2 of 6) 103565 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-51 chr7 90396013 90396208 + 3.1004765869889 NA intron (NM_001040087, intron 3 of 9) intron (NM_001040087, intron 3 of 9) 9129 NM_001040088 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-28 chr3 36464609 36464900 + 3.1004765869889 NA intron (NM_009673, intron 3 of 12) intron (NM_009673, intron 3 of 12) 10770 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-29 chr19 5017456 5017747 + 3.1004765869889 NA Intergenic B3A|SINE|B2 -6405 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-42 chr9 57072158 57072394 + 3.1004765869889 NA promoter-TSS (NR_045886) promoter-TSS (NR_045886) 236 NM_001110351 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-23 chr17 14383095 14383345 + 3.1004765869889 NA intron (NM_022315, intron 9 of 12) intron (NM_022315, intron 9 of 12) 15722 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-20 chr15 59638115 59638392 + 3.1004765869889 NA Intergenic Intergenic -10401 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-27 chr18 66177482 66177674 + 3.1004765869889 NA intron (NM_178793, intron 2 of 10) intron (NM_178793, intron 2 of 10) 41755 NR_030467 751558 NR_030467 ENSMUSG00000076147 Mir694 Mirn694|mir-694|mmu-mir-694 microRNA 694 ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-8 chr11 12416818 12417092 + 3.1004765869889 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) -4815 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889 chr10 111233697 111233897 + 3.1004765869889 NA intron (NM_001003717, intron 3 of 22) intron (NM_001003717, intron 3 of 22) -64882 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-38 chr3 142434715 142434911 + 3.1004765869889 NA Intergenic Intergenic -39117 NM_019808 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-62 chr8 128427530 128427736 + 3.1004765869889 NA intron (NM_001358959, intron 4 of 16) intron (NM_001358959, intron 4 of 16) 68392 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-19 chr15 37611504 37611731 + 3.1004765869889 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 68957 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-18 chr15 98530428 98530697 + 3.1004765869889 NA intron (NM_001289440, intron 3 of 8) RMER17A|LTR|ERVK 3707 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-34 chr6 18272238 18272605 + 3.1004765869889 NA intron (NM_021050, intron 15 of 26) intron (NM_021050, intron 15 of 26) 101734 NM_021050 12638 Mm.15621 NM_021050 ENSMUSG00000041301 Cftr AW495489|Abcc7 cystic fibrosis transmembrane conductance regulator protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-12 chr5 115331016 115331295 + 3.1004765869889 NA intron (NM_025573, intron 2 of 3) intron (NM_025573, intron 2 of 3) 3978 NR_036616 108014 Mm.287826 NM_025573 ENSMUSG00000029538 Srsf9 25kDa|2610029M16Rik|SRp30c|Sfrs9 serine/arginine-rich splicing factor 9 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-11 chr14 48223364 48223617 + 3.1004765869889 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 24774 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-23 chr17 80729550 80729894 + 3.1004765869889 NA Intergenic Intergenic -1697 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-65 chr9 67021358 67021607 + 3.1004765869889 NA Intergenic Intergenic 22389 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-59 chr8 110937175 110937371 + 3.1004765869889 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 17408 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-30 chr3 152123826 152124095 + 3.1004765869889 NA intron (NM_016867, intron 3 of 5) intron (NM_016867, intron 3 of 5) 41940 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-61 chr8 125285559 125285768 + 3.1004765869889 NA Intergenic Intergenic 207170 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-43 chr9 64208264 64208494 + 3.1004765869889 NA intron (NM_008927, intron 3 of 10) intron (NM_008927, intron 3 of 10) -26822 NM_033607 93841 Mm.390180 NM_033607 ENSMUSG00000035337 Uchl4 - ubiquitin carboxyl-terminal esterase L4 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-10 chr11 72757420 72757682 + 3.1004765869889 NA intron (NM_009671, intron 19 of 24) intron (NM_009671, intron 19 of 24) 38288 NM_001024926 192986 Mm.194755 NM_001024926 ENSMUSG00000057778 Cyb5d2 9330151E16Rik|Gm2 cytochrome b5 domain containing 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-49 chr7 15961191 15961442 + 3.1004765869889 NA intron (NM_153068, intron 3 of 5) B1F|SINE|Alu 6219 NM_153068 259300 Mm.138215 NM_153068 ENSMUSG00000074364 Ehd2 BC027084|C130052H20Rik EH-domain containing 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-5 chr10 4389773 4390035 + 3.1004765869889 NA Intergenic Intergenic -1796 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-29 chr3 92719742 92720091 + 3.1004765869889 NA intron (NM_026394, intron 1 of 1) intron (NM_026394, intron 1 of 1) 434 NM_026394 67828 Mm.158176 NM_026394 ENSMUSG00000042124 Lce1f 1110055J05Rik late cornified envelope 1F protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-17 chr14 120138341 120138603 + 3.1004765869889 NA Intergenic Intergenic -96037 NM_001001490 239283 Mm.138520 NM_001001490 ENSMUSG00000044819 Oxgr1 Cysltr3|Gm299|Gpr80|Gpr99|P2Y15 oxoglutarate (alpha-ketoglutarate) receptor 1 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-58 chr8 95360962 95361431 + 3.1004765869889 NA intron (NM_008609, intron 1 of 9) intron (NM_008609, intron 1 of 9) 8900 NM_008609 17388 Mm.217116 NM_008609 ENSMUSG00000031790 Mmp15 AI503551|MT-MMP 2|MT2-MMP matrix metallopeptidase 15 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-7 chr10 96824653 96824964 + 3.1004765869889 NA Intergenic Intergenic 207807 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-10 chr4 102159194 102159443 + 3.1004765869889 NA Intergenic Intergenic -95424 NM_001177983 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-30 chr2 30850170 30850461 + 3.1004765869889 NA intron (NM_009116, intron 1 of 3) MIRb|SINE|MIR 4948 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-37 chr7 43479117 43479421 + 3.1004765869889 NA intron (NM_001164518, intron 2 of 7) intron (NM_001164518, intron 2 of 7) 10754 NM_001164518 210094 Mm.228087 NM_001164518 ENSMUSG00000013367 Iglon5 A230106M20Rik|Gm1431 IgLON family member 5 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-26 chr18 43509654 43509889 + 3.1004765869889 NA Intergenic Intergenic -71485 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-48 chr6 100798430 100798685 + 3.1004765869889 NA intron (NM_198612, intron 6 of 6) T-rich|Low_complexity|Low_complexity -35081 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-60 chr8 111723859 111724055 + 3.1004765869889 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 8179 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-13 chr12 112621211 112621555 + 3.1004765869889 NA intron (NM_007421, intron 1 of 12) intron (NM_007421, intron 1 of 12) 1336 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding unique_peak2_0_12_-3.94217975563032_1.72934984032593_3.1004765869889-13 chr8 31160399 31160640 + 3.1004765869889 NA TTS (NM_144927) TTS (NM_144927) 8205 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding unique_peak1_14_1_2.63758752477237_2.31879376238619_3.1004765869889-16 chr14 64948239 64948616 + 3.1004765869889 NA intron (NM_177338, intron 1 of 9) intron (NM_177338, intron 1 of 9) 1430 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding unique_peak1_13_1_2.53875407336517_2.26937703668258_3.1004765869889-19 chr16 15708723 15708917 + 3.1004765869889 NA exon (NM_011159, exon 32 of 86) exon (NM_011159, exon 32 of 86) 70954 NM_011159 19090 Mm.71 NM_011159 ENSMUSG00000022672 Prkdc AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip protein kinase, DNA activated, catalytic polypeptide protein-coding common_peak2_61_21_1.21101792091548_5.06494057909504_3.09993411082635 chr15 34238161 34238515 + 3.09993411082635 NA exon (NM_033521, exon 1 of 7) exon (NM_033521, exon 1 of 7) 312 NM_033521 114128 Mm.197518 NM_033521 ENSMUSG00000022257 Laptm4b C330023P13Rik|LAPTM4beta lysosomal-associated protein transmembrane 4B protein-coding common_peak2_25_51_-1.27490154368598_5.0629889462981_3.09993411082635 chr16 94453200 94453951 + 3.09993411082635 NA intron (NM_009441, intron 37 of 45) intron (NM_009441, intron 37 of 45) 73054 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding common_peak1_178_91_0.665715616279495_6.85641976419676_3.09806460938018 chr3 96104515 96105923 + 3.09806460938018 NA intron (NM_001025614, intron 1 of 11) intron (NM_001025614, intron 1 of 11) 692 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak2_286_317_-0.447319317683032_8.08922329644284_3.09776411110918 chr16 55819432 55821880 + 3.09776411110918 NA intron (NM_001159395, intron 2 of 12) intron (NM_001159395, intron 2 of 12) 1482 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_76_29_1.07394385656267_5.44386252388985_3.09530603560454 chr3 143597433 143598669 + 3.09530603560454 NA Intergenic Intergenic 114092 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak2_85_119_-0.76770304497233_6.52303907312235_3.0913693941224 chr11 60726706 60728182 + 3.0913693941224 NA promoter-TSS (NM_001302207) promoter-TSS (NM_001302207) -181 NM_001302207 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding common_peak2_84_119_-0.784457819091433_6.5146616860628_3.0913693941224 chr7 99139459 99141135 + 3.0913693941224 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 847 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_105_46_0.884126224018979_5.99665196368713_3.09078640552327 chr11 32455473 32456302 + 3.09078640552327 NA intron (NM_001361561, intron 1 of 1) CpG 517 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding unique_peak2_27_54_-1.24966061973273_5.15652940365829_3.08955708235436 chr6 48395500 48396355 + 3.08955708235436 NA promoter-TSS (NR_152251) promoter-TSS (NR_152251) 341 NM_001362144 77827 Mm.107646 NM_133922 ENSMUSG00000042810 Krba1 A930040G15Rik|AI448780 KRAB-A domain containing 1 protein-coding unique_peak1_51_16_1.33102035363153_4.7529730180661_3.08659436536937-2 chr8 49387318 49388352 + 3.08659436536937 NA Intergenic Intergenic -713145 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding unique_peak1_51_16_1.33102035363153_4.7529730180661_3.08659436536937 chr7 142378463 142379344 + 3.08659436536937 NA intron (NM_009983, intron 5 of 8) intron (NM_009983, intron 5 of 8) -5157 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_29_57_-1.22744844992844_5.24425677016335_3.08612073477863 chr1 6360828 6361893 + 3.08612073477863 NA intron (NM_001195732, intron 1 of 4) ID4_|SINE|ID 2029 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding unique_peak1_69_25_1.14386129483147_5.27237036555683_3.08612073477863 chr11 20331727 20332596 + 3.08612073477863 NA exon (NM_018861, exon 1 of 8) exon (NM_018861, exon 1 of 8) 552 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding unique_peak1_68_25_1.12324918588262_5.2620643110824_3.08612073477863 chr15 89077274 89078049 + 3.08612073477863 NA intron (NM_026485, intron 1 of 9) intron (NM_026485, intron 1 of 9) 1597 NM_001355617 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak1_68_25_1.12324918588262_5.2620643110824_3.08612073477863 chr19 9059858 9060457 + 3.08612073477863 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 27799 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_43_73_-1.03027796303189_5.694314384113_3.08327006392556 chr11 86570739 86571426 + 3.08327006392556 NA Intergenic Intergenic 13076 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_157_193_-0.589400155485095_7.30521276444458_3.08173118051183 chr15 36373934 36375463 + 3.08173118051183 NA Intergenic Intergenic -91551 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak2_45_13_1.43549837973865_4.52510411192693_3.08052104495994 chr7 121707088 121707435 + 3.08052104495994 NA promoter-TSS (NM_001033173) promoter-TSS (NM_001033173) -8 NM_001033173 76179 Mm.122538 NM_001033173 ENSMUSG00000063317 Usp31 6330567E21Rik|mKIAA1203 ubiquitin specific peptidase 31 protein-coding unique_peak1_45_13_1.43549837973865_4.52510411192693_3.08052104495994-3 chr14 46885496 46886018 + 3.08052104495994 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) 2792 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak1_45_13_1.43549837973865_4.52510411192693_3.08052104495994-2 chr13 108602017 108602559 + 3.08052104495994 NA Intergenic Intergenic -51889 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding unique_peak1_45_13_1.43549837973865_4.52510411192693_3.08052104495994-4 chr2 18047764 18048376 + 3.08052104495994 NA exon (NM_028317, exon 1 of 1) exon (NM_028317, exon 1 of 1) 379 NM_028317 72668 Mm.102183 NM_028317 ENSMUSG00000054074 Skida1 2810030E01Rik|5730507N06Rik|BB088113|DLN-1 SKI/DACH domain containing 1 protein-coding unique_peak1_45_13_1.43549837973865_4.52510411192693_3.08052104495994 chr12 100354782 100355147 + 3.08052104495994 NA intron (NM_001033213, intron 16 of 19) intron (NM_001033213, intron 16 of 19) 78355 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak1_36_9_1.60903264617008_4.1264444179724_3.08022526292111-4 chr8 71464980 71465480 + 3.08022526292111 NA intron (NM_053162, intron 1 of 1) intron (NM_053162, intron 1 of 1) 304 NM_053162 94065 Mm.29489 NM_053162 ENSMUSG00000034880 Mrpl34 0610007O17Rik|D8Bwg1484e mitochondrial ribosomal protein L34 protein-coding unique_peak1_36_9_1.60903264617008_4.1264444179724_3.08022526292111 chr11 44731099 44731714 + 3.08022526292111 NA intron (NM_001290709, intron 6 of 15) intron (NM_001290709, intron 6 of 15) 113306 NM_001290710 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding unique_peak2_10_31_-1.80671463825645_4.09664268087177_3.08022526292111 chr8 82454178 82454731 + 3.08022526292111 NA Intergenic LTR81A|LTR|Gypsy -51868 NM_008357 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak1_37_9_1.64723535965779_4.14554577471625_3.08022526292111 chr3 102362255 102362688 + 3.08022526292111 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 100066 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA unique_peak1_37_9_1.64723535965779_4.14554577471625_3.08022526292111-2 chr6 55436044 55436653 + 3.08022526292111 NA Intergenic Intergenic -15630 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding common_peak1_36_9_1.60903264617008_4.1264444179724_3.08022526292111 chr13 70835961 70836388 + 3.08022526292111 NA non-coding (NR_137640, exon 3 of 23) non-coding (NR_137640, exon 3 of 23) 5637 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_36_9_1.60903264617008_4.1264444179724_3.08022526292111-3 chr16 32677047 32677576 + 3.08022526292111 NA intron (NM_001289443, intron 2 of 5) intron (NM_001289443, intron 2 of 5) 4157 NM_001289443 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding unique_peak1_36_9_1.60903264617008_4.1264444179724_3.08022526292111-2 chr13 33950859 33951304 + 3.08022526292111 NA intron (NR_040707, intron 1 of 4) intron (NR_040707, intron 1 of 4) -13578 NM_001163239 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 N-ribosyldihydronicotinamide quinone reductase 2 protein-coding unique_peak1_110_49_0.860885173936929_6.07429877674319_3.07967901628471 chr8 69749625 69750355 + 3.07967901628471 NA promoter-TSS (NM_001200023) promoter-TSS (NM_001200023) -28 NM_001200023 620419 Mm.460423 NM_001200023 ENSMUSG00000092260 Zfp963 - zinc finger protein 963 protein-coding common_peak2_288_319_-0.446416383578743_8.09871990309799_3.07741346305815 chr11 48870112 48872910 + 3.07741346305815 NA promoter-TSS (NM_008326) promoter-TSS (NM_008326) -91 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak2_193_228_-0.53464821325911_7.57187968146739_3.07287357356548 chr17 65612487 65614450 + 3.07287357356548 NA promoter-TSS (NM_013933) promoter-TSS (NM_013933) 87 NM_001355402 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak1_115_52_0.839937587240823_6.14788924818361_3.07270752173745 chr14 54894123 54894969 + 3.07270752173745 NA intron (NM_019402, intron 1 of 6) CpG 403 NM_019402 54196 Mm.7723 NM_019402 ENSMUSG00000022194 Pabpn1 PAB2|Pabp3|mPABII poly(A) binding protein, nuclear 1 protein-coding common_peak1_130_61_0.787865998055516_6.34812930941463_3.07129408524206-2 chr9 56160097 56161006 + 3.07129408524206 NA intron (NM_019793, intron 1 of 6) CpG 519 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_130_61_0.787865998055516_6.34812930941463_3.07129408524206 chr11 61564293 61566026 + 3.07129408524206 NA intron (NM_001252189, intron 1 of 8) intron (NM_001252189, intron 1 of 8) 14528 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding common_peak2_73_107_-0.83098174067927_6.33939663182383_3.07129408524205 chr6 38353763 38354948 + 3.07129408524205 NA 5' UTR (NM_001347122, exon 1 of 13) 5' UTR (NM_001347122, exon 1 of 13) 248 NM_001347122 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_186_96_0.651998393955345_6.9259120391648_3.07071581483362 chr1 171437583 171439891 + 3.07071581483362 NA intron (NM_172647, intron 1 of 9) intron (NM_172647, intron 1 of 9) 1176 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding common_peak2_169_205_-0.571122730239376_7.40093916206353_3.06784301121604 chr1 39900021 39901851 + 3.06784301121604 NA promoter-TSS (NM_001252201) promoter-TSS (NM_001252201) 23 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak1_170_205_-0.562720847756405_7.40514010330502_3.06784301121604 chr19 47889608 47891281 + 3.06784301121604 NA Intergenic Intergenic 24650 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak2_40_70_-1.071732572331_5.61388083333918_3.06382823807954 chr1 182282250 182283088 + 3.06382823807954 NA promoter-TSS (NM_001360783) promoter-TSS (NM_001360783) 132 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak2_40_70_-1.071732572331_5.61388083333918_3.06382823807954-2 chr5 4192107 4192890 + 3.06382823807954 NA intron (NM_001042670, intron 1 of 1) CpG 131 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b Gm9897 mitochondrial transcription termination factor 1b protein-coding common_peak1_84_34_0.99314975957212_5.62585789673103_3.06382823807954 chr6 146903523 146904540 + 3.06382823807954 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 15537 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_175_211_-0.562855011112626_7.44649294900689_3.06341005134802 chr15 74622468 74624052 + 3.06341005134802 NA intron (NM_001177437, intron 11 of 26) intron (NM_001177437, intron 11 of 26) 13058 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak2_188_223_-0.540204001156559_7.53725292147932_3.05882480195613 chr19 47889260 47891405 + 3.05882480195613 NA Intergenic Intergenic 24538 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_245_135_0.557277349004309_7.36610151575249_3.05712606537657 chr9 64019567 64021960 + 3.05712606537657 NA exon (NM_008542, exon 1 of 4) exon (NM_008542, exon 1 of 4) 1296 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak2_21_46_-1.36835846950733_4.87040961692397_3.05319673240193 chr3 138061986 138063023 + 3.05319673240193 NA intron (NR_037975, intron 1 of 3) MT2B|LTR|ERVL 4884 NR_037975 329763 Mm.169710 NM_177860 ENSMUSG00000049349 Gm5105 D830013H12|EG329763 predicted gene 5105 ncRNA unique_peak1_55_18_1.27671660077509_4.88628581383113_3.05319673240193 chr15 58260216 58260799 + 3.05319673240193 NA Intergenic Intergenic -45615 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak1_55_18_1.27671660077509_4.88628581383113_3.05319673240193 chr5 151233416 151233908 + 3.05319673240193 NA Intergenic CpG -43469 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_55_18_1.27671660077509_4.88628581383113_3.05319673240193-2 chr3 88500157 88501191 + 3.05319673240193 NA intron (NM_001002011, intron 1 of 11) C-rich|Low_complexity|Low_complexity 2678 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-8 chr19 16780066 16780410 + 3.05312482518673 NA intron (NM_173028, intron 1 of 71) intron (NM_173028, intron 1 of 71) 695 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-5 chr13 3669875 3670256 + 3.05312482518673 NA Intergenic Intergenic 36033 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-11 chr5 17302486 17302715 + 3.05312482518673 NA Intergenic Intergenic -173522 NM_027609 70935 Mm.332225 NM_027609 ENSMUSG00000058643 Speer4f1 4922502J04Rik|SPEER-4F|Speer4f spermatogenesis associated glutamate (E)-rich protein 4F1 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673 chr19 4490997 4491428 + 3.05312482518673 NA Intergenic Intergenic 7371 NM_027237 69861 Mm.282978 NM_027237 ENSMUSG00000042041 2010003K11Rik - RIKEN cDNA 2010003K11 gene protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-15 chr9 67629506 67629812 + 3.05312482518673 NA Intergenic Intergenic -69956 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-3 chr2 104491975 104492585 + 3.05312482518673 NA intron (NM_010434, intron 1 of 15) intron (NM_010434, intron 1 of 15) 2209 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-6 chr6 67104203 67104586 + 3.05312482518673 NA Intergenic Intergenic -66987 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-6 chr14 57850658 57851075 + 3.05312482518673 NA intron (NM_001360097, intron 7 of 13) B1_Mus1|SINE|Alu 24627 NM_026401 67840 Mm.319530 NM_026401 ENSMUSG00000021967 Mrpl57 2610025P17Rik|AV005697|Mrp63 mitochondrial ribosomal protein L57 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-7 chr7 66335075 66335362 + 3.05312482518673 NA intron (NM_146191, intron 3 of 33) intron (NM_146191, intron 3 of 33) 46506 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-7 chr17 27561910 27562163 + 3.05312482518673 NA intron (NM_001166543, intron 4 of 4) intron (NM_001166543, intron 4 of 4) 3691 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251|Smim29 expressed sequence AI413582 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-13 chr5 93124436 93124939 + 3.05312482518673 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 31271 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673 chr4 107368487 107368816 + 3.05312482518673 NA intron (NM_028355, intron 1 of 17) intron (NM_028355, intron 1 of 17) 867 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-5 chr5 24476322 24476740 + 3.05312482518673 NA intron (NM_001359881, intron 2 of 15) intron (NM_001359881, intron 2 of 15) 24354 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-14 chr8 71274136 71274340 + 3.05312482518673 NA intron (NM_001142322, intron 1 of 39) intron (NM_001142322, intron 1 of 39) 1524 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-9 chr7 116212241 116212721 + 3.05312482518673 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -13920 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-2 chr2 31453382 31453600 + 3.05312482518673 NA Intergenic Intergenic -16779 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673 chr10 10554774 10555162 + 3.05312482518673 NA intron (NM_026405, intron 1 of 2) intron (NM_026405, intron 1 of 2) 3239 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-2 chr10 24392374 24392689 + 3.05312482518673 NA Intergenic Intergenic 169014 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-10 chr4 155651282 155651536 + 3.05312482518673 NA intron (NM_011985, intron 5 of 7) intron (NM_011985, intron 5 of 7) 1881 NM_001320235 26561 Mm.29373 NM_011985 ENSMUSG00000029061 Mmp23 CA-MMP matrix metallopeptidase 23 protein-coding unique_peak2_4_21_-2.39562471651913_3.26161926037773_3.05312482518673 chr4 58167344 58167762 + 3.05312482518673 NA intron (NM_022814, intron 3 of 47) intron (NM_022814, intron 3 of 47) 39043 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-10 chr7 139787092 139787427 + 3.05312482518673 NA Intergenic Intergenic 8241 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-3 chr10 86304446 86304853 + 3.05312482518673 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 4237 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-4 chr3 60633189 60633438 + 3.05312482518673 NA Intergenic Intergenic 132134 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-9 chr3 102473296 102473593 + 3.05312482518673 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 3525 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_25_4_2.10361007956775_3.37373313467124_3.05312482518673-8 chr7 101329477 101329779 + 3.05312482518673 NA intron (NM_019990, intron 2 of 6) intron (NM_019990, intron 2 of 6) 8515 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-4 chr10 111368827 111369014 + 3.05312482518673 NA Intergenic Intergenic 70241 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding unique_peak1_24_4_2.04742574683819_3.34564096830646_3.05312482518673-12 chr5 90595076 90595483 + 3.05312482518673 NA intron (NM_001252661, intron 13 of 13) intron (NM_001252661, intron 13 of 13) 34070 NM_001252661 622307 Mm.389654 NM_001252661 ENSMUSG00000070690 5830473C10Rik Arg|Gm17754 RIKEN cDNA 5830473C10 gene protein-coding unique_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775-5 chr3 143192630 143193132 + 3.04993787975775 NA Intergenic Intergenic -50174 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA common_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775-2 chr7 34930466 34930720 + 3.04993787975775 NA intron (NM_008820, intron 3 of 14) intron (NM_008820, intron 3 of 14) 18186 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding unique_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775-3 chr17 27154150 27154822 + 3.04993787975775 NA intron (NM_173027, intron 2 of 5) intron (NM_173027, intron 2 of 5) 13278 NM_173027 271424 Mm.209679 NM_173027 ENSMUSG00000024210 Ip6k3 D830007E07Rik|Ihpk3 inositol hexaphosphate kinase 3 protein-coding common_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775 chr15 59081393 59081923 + 3.04993787975775 NA 5' UTR (NM_001146180, exon 1 of 14) 5' UTR (NM_001146180, exon 1 of 14) 368 NM_001146180 211401 Mm.215481 NM_144800 ENSMUSG00000022353 Mtss1 2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429 metastasis suppressor 1 protein-coding unique_peak2_9_29_-1.8501386730636_3.98182125907672_3.04993787975775 chr17 5847154 5847531 + 3.04993787975775 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 5962 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding unique_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775-6 chr9 13315359 13316024 + 3.04993787975775 NA Intergenic Intergenic 68735 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775 chr10 60353087 60353436 + 3.04993787975775 NA intron (NM_028732, intron 1 of 6) intron (NM_028732, intron 1 of 6) 6410 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding unique_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775-4 chr3 84324443 84324803 + 3.04993787975775 NA Intergenic Intergenic -19848 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak1_34_8_1.68143099110349_4.01064049699406_3.04993787975775-2 chr14 69767446 69767888 + 3.04993787975775 NA TTS (NR_130157) TTS (NR_130157) 195 NM_020275 21933 Mm.193430 NM_020275 ENSMUSG00000022074 Tnfrsf10b DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB tumor necrosis factor receptor superfamily, member 10b protein-coding common_peak1_193_101_0.632130232866339_6.98849045840466_3.04743846643663 chr17 87796872 87798586 + 3.04743846643663 NA 5' UTR (NM_199251, exon 1 of 2) 5' UTR (NM_199251, exon 1 of 2) 265 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_38_67_-1.08108906456777_5.54691830896645_3.04692638843303 chr2 132577410 132578016 + 3.04692638843303 NA intron (NM_001355651, intron 1 of 19) CpG 535 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding common_peak1_81_32_1.02656544824198_5.55767684347945_3.04692638843302 chr10 93661786 93662944 + 3.04692638843302 NA intron (NM_021320, intron 2 of 9) intron (NM_021320, intron 2 of 9) 3489 NR_027478 667338 Mm.454582 NR_027478 Gm8580 EG667338 ribosomal protein L29 pseudogene pseudo common_peak1_345_203_0.460956718322116_7.90290370113255_3.04256445084483 chr2 32879632 32882565 + 3.04256445084483 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 4964 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_166_201_-0.56833911072525_7.37404192738917_3.04056102065235 chr2 152924770 152927562 + 3.04056102065235 NA Intergenic Intergenic 7042 NM_010226 14239 Mm.205798 NM_010226 ENSMUSG00000074676 Foxs1 FREAC10|Fkh3|Fkhl18 forkhead box S1 protein-coding unique_peak2_1_14_-3.15568561267099_2.32904778927302_3.03832868024006-3 chr4 145125187 145125491 + 3.03832868024006 NA intron (NM_001276465, intron 30 of 69) intron (NM_001276465, intron 30 of 69) 65327 NM_001276502 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-3 chr1 62772275 62772577 + 3.03832868024006 NA intron (NM_001077404, intron 12 of 16) intron (NM_001077404, intron 12 of 16) 22306 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-55 chr8 92996070 92996293 + 3.03832868024006 NA intron (NM_009209, intron 12 of 13) intron (NM_009209, intron 12 of 13) 35134 NM_009209 20538 Mm.57040 NM_009209 ENSMUSG00000055368 Slc6a2 NE-T|NET|Slc6a5 solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-6 chr10 120201626 120201827 + 3.03832868024006 NA promoter-TSS (NM_028679) promoter-TSS (NM_028679) -129 NR_152856 73914 Mm.146194 NM_028679 ENSMUSG00000020227 Irak3 4833428C18Rik|AI563835|IRAK-M interleukin-1 receptor-associated kinase 3 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-59 chr9 58542671 58543069 + 3.03832868024006 NA Intergenic Intergenic -1930 NM_133983 102657 Mm.5356 NM_133983 ENSMUSG00000035914 Cd276 6030411F23Rik|AU016588|B7RP-2|B7h3 CD276 antigen protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-28 chr2 180214392 180214580 + 3.03832868024006 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 11373 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-8 chr11 82036708 82037016 + 3.03832868024006 NA intron (NM_011333, intron 2 of 2) intron (NM_011333, intron 2 of 2) 1285 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-23 chr19 56204097 56204305 + 3.03832868024006 NA Intergenic Intergenic -83711 NM_001329936 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-4 chr10 7290090 7290500 + 3.03832868024006 NA Intergenic Intergenic -78058 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-27 chr2 102896886 102897252 + 3.03832868024006 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 4596 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-32 chr3 121710042 121710230 + 3.03832868024006 NA Intergenic Intergenic -13401 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-57 chr9 35156751 35157006 + 3.03832868024006 NA intron (NM_027030, intron 2 of 5) intron (NM_027030, intron 2 of 5) 19109 NM_027030 69305 Mm.229110 NM_027030 ENSMUSG00000032040 Dcps 1700001E16Rik|AA408441 decapping enzyme, scavenger protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-16 chr16 24509939 24510147 + 3.03832868024006 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -19271 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-48 chr7 126621872 126622127 + 3.03832868024006 NA Intergenic RLTR9E|LTR|ERVK 3471 NM_019738 56312 Mm.18742 NM_019738 ENSMUSG00000030717 Nupr1 2310032H04Rik|Com1|p8 nuclear protein transcription regulator 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-35 chr4 55000741 55000930 + 3.03832868024006 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 52890 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-43 chr6 39543416 39543607 + 3.03832868024006 NA intron (NM_172477, intron 1 of 18) intron (NM_172477, intron 1 of 18) 14323 NM_172477 209773 Mm.440021 NM_172477 ENSMUSG00000038456 Dennd2a B930096L08Rik|C130031G22|mKIAA1277 DENN/MADD domain containing 2A protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-47 chr7 109705924 109706269 + 3.03832868024006 NA intron (NM_020616, intron 3 of 5) intron (NM_020616, intron 3 of 5) 2359 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-5 chr10 96215301 96215569 + 3.03832868024006 NA Intergenic Intergenic -10772 NR_110448 74881 Mm.410819 NR_110448 ENSMUSG00000112762 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-60 chr9 99128190 99128381 + 3.03832868024006 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 11926 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_1_14_-3.15568561267099_2.32904778927302_3.03832868024006-2 chr3 89913889 89914127 + 3.03832868024006 NA promoter-TSS (NM_001310676) promoter-TSS (NM_001310676) -812 NM_010559 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-11 chr12 75670644 75671004 + 3.03832868024006 NA Intergenic Intergenic -1287 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-12 chr13 98651415 98651679 + 3.03832868024006 NA Intergenic Intergenic -14137 NM_026685 68344 Mm.28766 NM_026685 ENSMUSG00000046082 Tmem174 0610009B10Rik|AA986094 transmembrane protein 174 protein-coding unique_peak2_1_14_-3.15568561267099_2.32904778927302_3.03832868024006-6 chr7 129760934 129761167 + 3.03832868024006 NA Intergenic Intergenic 169187 NM_172255 207425 Mm.229323 NM_172255 ENSMUSG00000042055 Wdr11 2900055P10Rik|AW489876|Brwd2|mKIAA1351 WD repeat domain 11 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-30 chr3 51563707 51563940 + 3.03832868024006 NA non-coding (NR_033624, exon 3 of 5) non-coding (NR_033624, exon 3 of 5) -3000 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding unique_peak2_1_14_-3.15568561267099_2.32904778927302_3.03832868024006 chr1 16660806 16661108 + 3.03832868024006 NA intron (NR_037998, intron 3 of 3) intron (NR_037998, intron 3 of 3) 3405 NR_037998 329101 Mm.406049 NR_037998 ENSMUSG00000097744 D030040B21Rik D030040B21 RIKEN cDNA D030040B21 gene ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-18 chr18 36759969 36760157 + 3.03832868024006 NA promoter-TSS (NM_026464) promoter-TSS (NM_026464) -159 NM_026464 67936 Mm.271719 NM_026464 ENSMUSG00000042660 Wdr55 2410080P20Rik|C80692 WD repeat domain 55 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-7 chr11 67520513 67520794 + 3.03832868024006 NA Intergenic Intergenic -12345 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-2 chr1 44102023 44102327 + 3.03832868024006 NA intron (NM_001356296, intron 1 of 6) CpG 266 NM_029368 75623 Mm.348017 NM_029368 ENSMUSG00000026049 Tex30 1700029F09Rik|3110030D08Rik testis expressed 30 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-29 chr3 50443766 50443960 + 3.03832868024006 NA promoter-TSS (NM_011990) promoter-TSS (NM_011990) -250 NM_011990 26570 Mm.260988 NM_011990 ENSMUSG00000027737 Slc7a11 9930009M05Rik|AI451155|sut|xCT solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-56 chr8 125243344 125243572 + 3.03832868024006 NA intron (NM_174854, intron 11 of 12) intron (NM_174854, intron 11 of 12) 189263 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-33 chr3 122317815 122318069 + 3.03832868024006 NA Intergenic ID_B1|SINE|B4 -24239 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-20 chr19 5879902 5880182 + 3.03832868024006 NA intron (NM_134154, intron 2 of 5) intron (NM_134154, intron 2 of 5) 2220 NM_001361974 107375 Mm.5323 NM_134154 ENSMUSG00000024818 Slc25a45 AW491445 solute carrier family 25, member 45 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-41 chr6 17316230 17316437 + 3.03832868024006 NA intron (NM_001243064, intron 1 of 1) intron (NM_001243064, intron 1 of 1) 8693 NM_001243064 12389 Mm.28278 NM_007616 ENSMUSG00000007655 Cav1 Cav|Cav-1 caveolin 1, caveolae protein protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-62 chr9 107723736 107724044 + 3.03832868024006 NA Intergenic Intergenic -13415 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-24 chr2 5852948 5853321 + 3.03832868024006 NA intron (NM_016918, intron 1 of 9) intron (NM_016918, intron 1 of 9) -7957 NM_001356501 98828 Mm.181490 NM_133837 ENSMUSG00000039128 Cdc123 AA959893|G431001I09Rik cell division cycle 123 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-17 chr18 5396932 5397232 + 3.03832868024006 NA Intergenic Intergenic -62275 NM_001360447 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-50 chr8 3353049 3353362 + 3.03832868024006 NA promoter-TSS (NM_001033378) promoter-TSS (NM_001033378) -210 NM_001033378 319493 Mm.234565 NM_001033378 ENSMUSG00000074497 A430078G23Rik - RIKEN cDNA A430078G23 gene protein-coding unique_peak2_1_14_-3.15568561267099_2.32904778927302_3.03832868024006-4 chr7 16434794 16435103 + 3.03832868024006 NA exon (NM_198631, exon 14 of 14) exon (NM_198631, exon 14 of 14) -17831 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-14 chr15 6572480 6572798 + 3.03832868024006 NA Intergenic Intergenic -7208 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Fyb1|Slap130|p120/130|p120/p130 FYN binding protein protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-45 chr7 100046147 100046390 + 3.03832868024006 NA Intergenic Intergenic 36350 NM_001291320 69121 Mm.285295 NM_133709 ENSMUSG00000030732 Chrdl2 1810022C01Rik|Chl2 chordin-like 2 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-38 chr5 125043625 125043863 + 3.03832868024006 NA intron (NM_011424, intron 21 of 46) intron (NM_011424, intron 21 of 46) 40269 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-10 chr12 71883521 71883719 + 3.03832868024006 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) -5923 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-42 chr6 34878420 34878726 + 3.03832868024006 NA promoter-TSS (NM_001347101) promoter-TSS (NM_001347101) -508 NM_001135611 78412 Mm.248440 NM_199145 ENSMUSG00000046806 3110062M04Rik AL023049|Cyren|Mri RIKEN cDNA 3110062M04 gene protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-52 chr8 35927239 35927454 + 3.03832868024006 NA Intergenic Intergenic -44389 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-37 chr5 113269164 113269548 + 3.03832868024006 NA intron (NM_001309526, intron 6 of 12) (GA)n|Simple_repeat|Simple_repeat 11245 NM_001309528 52850 Mm.200203 NM_172718 ENSMUSG00000042216 Sgsm1 2410098H20Rik|AA408781|D5Bwg1524e|E130107M15|NuIP|Rutbc2 small G protein signaling modulator 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-46 chr7 101667166 101667357 + 3.03832868024006 NA exon (NM_009191, exon 2 of 16) exon (NM_009191, exon 2 of 16) 3493 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-61 chr9 99163576 99163869 + 3.03832868024006 NA Intergenic Intergenic -23511 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-51 chr8 25045057 25045379 + 3.03832868024006 NA intron (NM_031257, intron 10 of 11) intron (NM_031257, intron 10 of 11) -6256 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding unique_peak2_1_14_-3.15568561267099_2.32904778927302_3.03832868024006-5 chr7 84489035 84489325 + 3.03832868024006 NA Intergenic Intergenic -39774 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-22 chr19 19110348 19110566 + 3.03832868024006 NA intron (NM_001043354, intron 1 of 9) CpG 739 NM_001043354 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-53 chr8 64460759 64461077 + 3.03832868024006 NA Intergenic Intergenic 53523 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-36 chr5 25030050 25030387 + 3.03832868024006 NA intron (NM_145401, intron 1 of 15) intron (NM_145401, intron 1 of 15) -34465 NM_001310480 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-26 chr2 60831673 60831973 + 3.03832868024006 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) 49615 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-13 chr13 99063725 99063999 + 3.03832868024006 NA Intergenic Intergenic 24059 NR_045495 69603 Mm.390632 NR_045495 ENSMUSG00000100410 2310020H05Rik - RIKEN cDNA 2310020H05 gene ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-9 chr11 98747165 98747472 + 3.03832868024006 NA intron (NM_178060, intron 1 of 8) intron (NM_178060, intron 1 of 8) 5533 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-31 chr3 95727373 95727776 + 3.03832868024006 NA Intergenic ID_B1|SINE|B4 7399 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-19 chr18 61061107 61061305 + 3.03832868024006 NA exon (NM_001146268, exon 3 of 23) exon (NM_001146268, exon 3 of 23) 16056 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-49 chr7 130940930 130941278 + 3.03832868024006 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 4901 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-34 chr3 151294249 151294555 + 3.03832868024006 NA Intergenic Intergenic -143480 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-54 chr8 76955691 76955883 + 3.03832868024006 NA intron (NM_001083906, intron 2 of 8) intron (NM_001083906, intron 2 of 8) 53279 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006 chr1 40178486 40178741 + 3.03832868024006 NA Intergenic Intergenic -46467 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-40 chr5 149624144 149624388 + 3.03832868024006 NA intron (NM_013559, intron 11 of 17) intron (NM_013559, intron 11 of 17) 12049 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-21 chr19 10104130 10104323 + 3.03832868024006 NA Intergenic Intergenic -2723 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-44 chr7 98970218 98970448 + 3.03832868024006 NA intron (NM_178635, intron 12 of 14) intron (NM_178635, intron 12 of 14) 131488 NM_001285795 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-58 chr9 49961670 49961862 + 3.03832868024006 NA Intergenic Intergenic -162373 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-15 chr15 80099395 80099702 + 3.03832868024006 NA intron (NM_207708, intron 1 of 3) intron (NM_207708, intron 1 of 3) 8214 NM_207708 20972 Mm.230301 NM_009303 ENSMUSG00000022415 Syngr1 R75468|Syngr1b|p29 synaptogyrin 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-39 chr5 139425049 139425239 + 3.03832868024006 NA intron (NM_029771, intron 2 of 2) intron (NM_029771, intron 2 of 2) 1965 NM_029771 76854 Mm.389706 NM_029771 ENSMUSG00000053647 Gper1 6330420K13Rik|CMKRL2|Ceprl|FEG-1|GPCR-Br|Gper|Gpr30 G protein-coupled estrogen receptor 1 protein-coding unique_peak1_16_2_2.23192333618854_2.70092416881543_3.03832868024006-25 chr2 58545921 58546232 + 3.03832868024006 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 15334 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak2_392_415_-0.384596787044492_8.50814132461885_3.03532686538978 chr19 5802773 5805623 + 3.03532686538978 NA Intergenic Intergenic -1526 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-31 chr4 47328243 47328485 + 3.03427613622886 NA Intergenic Intergenic -24858 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-5 chr13 41801264 41801513 + 3.03427613622886 NA intron (NM_001145875, intron 4 of 6) intron (NM_001145875, intron 4 of 6) 46100 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-4 chr10 93648277 93648512 + 3.03427613622886 NA intron (NM_021320, intron 2 of 9) intron (NM_021320, intron 2 of 9) 7345 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-16 chr16 32865229 32865547 + 3.03427613622886 NA intron (NM_172615, intron 1 of 18) intron (NM_172615, intron 1 of 18) 2978 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-46 chr8 126612369 126612578 + 3.03427613622886 NA Intergenic Intergenic -19037 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-38 chr5 52865602 52865957 + 3.03427613622886 NA intron (NM_024213, intron 26 of 27) intron (NM_024213, intron 26 of 27) 31644 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-47 chr9 35467956 35468206 + 3.03427613622886 NA intron (NM_021339, intron 7 of 18) intron (NM_021339, intron 7 of 18) 16005 NM_021339 57810 Mm.80509 NM_021339 ENSMUSG00000038119 Cdon CDO|Cd0|Orcam cell adhesion molecule-related/down-regulated by oncogenes protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-17 chr9 82965873 82966386 + 3.03427613622886 NA intron (NM_001081216, intron 4 of 39) intron (NM_001081216, intron 4 of 39) 9360 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-32 chr4 82410797 82411033 + 3.03427613622886 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 94864 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-23 chr2 25266980 25267245 + 3.03427613622886 NA intron (NM_175286, intron 1 of 3) intron (NM_175286, intron 1 of 3) 4514 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-6 chr15 65889598 65889976 + 3.03427613622886 NA intron (NM_001347038, intron 6 of 12) intron (NM_001347038, intron 6 of 12) 22467 NM_001347038 18256 Mm.41776 NM_010953 ENSMUSG00000015001 Oc90 Ocn-95|PLA2L|Pla2ll|oc95 otoconin 90 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-12 chr3 116006608 116006823 + 3.03427613622886 NA promoter-TSS (NM_001163515) promoter-TSS (NM_001163515) 691 NM_023214 66500 Mm.34550 NM_023214 ENSMUSG00000054414 Slc30a7 1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-36 chr5 31571529 31571963 + 3.03427613622886 NA promoter-TSS (NR_102275) promoter-TSS (NR_102275) -349 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-40 chr5 139970512 139970744 + 3.03427613622886 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 62685 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-10 chr13 54780629 54780982 + 3.03427613622886 NA Intergenic Intergenic -3193 NM_001286179 218268 Mm.425821 NM_001033269 ENSMUSG00000074895 Eif4e1b Eif4eloo|Gm273 eukaryotic translation initiation factor 4E family member 1B protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-22 chr18 75513419 75513704 + 3.03427613622886 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -1084 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-17 chr16 38399409 38399781 + 3.03427613622886 NA intron (NM_134102, intron 9 of 10) intron (NM_134102, intron 9 of 10) 33550 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-3 chr11 32398354 32398612 + 3.03427613622886 NA intron (NM_177364, intron 6 of 12) intron (NM_177364, intron 6 of 12) 50672 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-16 chr9 6331543 6331922 + 3.03427613622886 NA intron (NM_001357397, intron 3 of 6) intron (NM_001357397, intron 3 of 6) -65185 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak2_2_16_-2.75542225608536_2.70975171320766_3.03427613622886-2 chr7 112847419 112847658 + 3.03427613622886 NA intron (NM_001166585, intron 3 of 10) intron (NM_001166585, intron 3 of 10) 88154 NM_001166585 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-6 chr11 65460601 65461029 + 3.03427613622886 NA Intergenic Intergenic -172982 NR_040280 327946 Mm.383301 NR_040280 ENSMUSG00000085162 Gm12295 A730013G04 predicted gene 12295 ncRNA unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-44 chr7 133856691 133856931 + 3.03427613622886 NA intron (NM_025850, intron 2 of 10) intron (NM_025850, intron 2 of 10) -74026 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-48 chr9 56915672 56915881 + 3.03427613622886 NA Intergenic Intergenic 12595 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-15 chr6 127973796 127974059 + 3.03427613622886 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 86305 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886 chr1 16225290 16225576 + 3.03427613622886 NA Intergenic Intergenic 119551 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-15 chr15 76379757 76380007 + 3.03427613622886 NA promoter-TSS (NM_175457) promoter-TSS (NM_175457) -631 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-45 chr8 78797327 78797618 + 3.03427613622886 NA Intergenic Intergenic 23680 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-10 chr2 113442967 113443311 + 3.03427613622886 NA intron (NM_001285459, intron 1 of 16) intron (NM_001285459, intron 1 of 16) 2075 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-11 chr13 99308325 99308634 + 3.03427613622886 NA Intergenic Intergenic 36199 NM_026873 68927 Mm.276502 NM_026873 ENSMUSG00000021650 Ptcd2 1190005P08Rik pentatricopeptide repeat domain 2 protein-coding unique_peak2_2_16_-2.75542225608536_2.70975171320766_3.03427613622886 chr17 31854008 31854307 + 3.03427613622886 NA intron (NM_010831, intron 3 of 13) intron (NM_010831, intron 3 of 13) 1647 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-8 chr15 92654174 92654504 + 3.03427613622886 NA intron (NM_001164594, intron 1 of 7) intron (NM_001164594, intron 1 of 7) 57230 NM_001164594 239618 Mm.309826 NM_001164593 ENSMUSG00000036218 Pdzrn4 1110017D07Rik|LNX4|SAMCAP3L|mKIAA3027 PDZ domain containing RING finger 4 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-29 chr3 98015479 98015685 + 3.03427613622886 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 2044 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-26 chr2 72365245 72365489 + 3.03427613622886 NA intron (NM_023057, intron 4 of 19) intron (NM_023057, intron 4 of 19) 79666 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-9 chr13 15602917 15603107 + 3.03427613622886 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 139289 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-28 chr3 94622911 94623287 + 3.03427613622886 NA intron (NM_001293728, intron 6 of 11) intron (NM_001293728, intron 6 of 11) 35773 NM_001293728 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-49 chrX 101850009 101850239 + 3.03427613622886 NA intron (NM_001163610, intron 1 of 7) CpG 739 NM_001163610 100042480 Mm.232 NM_001163610 ENSMUSG00000079481 Nhsl2 1110062M06Rik|6430511F03|AI225852|AW488865|EG621083|Gm10456 NHS-like 2 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-24 chr2 30390805 30391007 + 3.03427613622886 NA Intergenic Intergenic -1348 NM_020329 57170 Mm.285167 NM_020329 ENSMUSG00000026856 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-25 chr2 38543598 38543886 + 3.03427613622886 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 31866 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-13 chr3 121714202 121714469 + 3.03427613622886 NA Intergenic Intergenic -9202 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-35 chr5 31494867 31495132 + 3.03427613622886 NA intron (NM_133756, intron 1 of 13) intron (NM_133756, intron 1 of 13) 258 NM_133756 74254 Mm.348649 NM_133756 ENSMUSG00000064037 Gpn1 2410004J02Rik|AI449615|MBDIN|NTPBP|Xab1 GPN-loop GTPase 1 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-9 chr18 60822954 60823185 + 3.03427613622886 NA intron (NM_011552, intron 16 of 24) intron (NM_011552, intron 16 of 24) 10993 NR_039567 100628611 NR_039567 ENSMUSG00000093327 Mir5107 mir-5107|mmu-mir-5107|mu-mir-5107 microRNA 5107 ncRNA unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-19 chr17 75206055 75206394 + 3.03427613622886 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 27443 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-8 chr12 14151857 14152085 + 3.03427613622886 NA promoter-TSS (NM_029007) promoter-TSS (NM_029007) 67 NM_029007 105005 Mm.227253 NM_029007 ENSMUSG00000020607 Fam84a 2310003N02Rik|4731402F03Rik|AW125753|Nse1 family with sequence similarity 84, member A protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-12 chr14 20163058 20163343 + 3.03427613622886 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 18582 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-42 chr7 80343135 80343388 + 3.03427613622886 NA intron (NM_026812, intron 1 of 3) CpG 124 NM_026812 68695 Mm.21171 NM_026812 ENSMUSG00000030532 Hddc3 1110033O09Rik|C86475|MESH1 HD domain containing 3 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-20 chr17 79349298 79349552 + 3.03427613622886 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 5666 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-3 chr1 151943386 151943650 + 3.03427613622886 NA intron (NM_197990, intron 3 of 5) intron (NM_197990, intron 3 of 5) 146802 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik RIKEN cDNA 1700025G04 gene protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-33 chr4 151619090 151619355 + 3.03427613622886 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 242546 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-7 chr11 109817780 109818044 + 3.03427613622886 NA intron (NM_027038, intron 1 of 4) intron (NM_027038, intron 1 of 4) 10134 NM_027038 69324 Mm.31700 NM_027038 ENSMUSG00000020617 1700012B07Rik 1700069D21Rik RIKEN cDNA 1700012B07 gene protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-13 chr14 63899563 63899916 + 3.03427613622886 NA intron (NM_028228, intron 6 of 6) intron (NM_028228, intron 6 of 6) 39427 NM_028228 72400 Mm.379214 NM_028228 ENSMUSG00000021958 Pinx1 2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1 PIN2/TERF1 interacting, telomerase inhibitor 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-43 chr7 127386261 127386554 + 3.03427613622886 NA intron (NM_030226, intron 2 of 2) intron (NM_030226, intron 2 of 2) 759 NM_030226 78921 Mm.200950 NM_030226 ENSMUSG00000030823 9130019O22Rik - RIKEN cDNA 9130019O22 gene protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886 chr1 87852090 87852481 + 3.03427613622886 NA Intergenic Intergenic -1002 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-50 chrX 103165289 103165501 + 3.03427613622886 NA Intergenic CpG 21269 NM_008671 17954 Mm.388694 NM_008671 ENSMUSG00000082229 Nap1l2 Bpx nucleosome assembly protein 1-like 2 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-2 chr1 186570115 186570409 + 3.03427613622886 NA Intergenic Intergenic -11581 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-39 chr5 117181505 117181811 + 3.03427613622886 NA intron (NM_001081308, intron 1 of 19) GA-rich|Low_complexity|Low_complexity 48070 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-2 chr1 136135704 136136007 + 3.03427613622886 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 4465 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-11 chr2 142901124 142901411 + 3.03427613622886 NA intron (NM_001355123, intron 1 of 26) CpG 197 NM_001081133 16558 Mm.251934 NM_001081133 ENSMUSG00000038844 Kif16b 8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590 kinesin family member 16B protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-34 chr5 5509751 5510091 + 3.03427613622886 NA intron (NM_001193661, intron 3 of 3) intron (NM_001193661, intron 3 of 3) 4868 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-7 chr15 78936043 78936272 + 3.03427613622886 NA intron (NM_133800, intron 1 of 5) intron (NM_133800, intron 1 of 5) 1224 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-27 chr3 65295997 65296185 + 3.03427613622886 NA intron (NM_001357358, intron 3 of 13) intron (NM_001357358, intron 3 of 13) 6594 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-18 chr9 95510405 95510678 + 3.03427613622886 NA intron (NM_001357977, intron 1 of 25) intron (NM_001357977, intron 1 of 25) 1455 NM_001357975 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-30 chr3 145337792 145338085 + 3.03427613622886 NA intron (NM_027770, intron 8 of 59) intron (NM_027770, intron 8 of 59) 45466 NM_001317733 71355 Mm.235570 NM_027770 ENSMUSG00000028197 Col24a1 5430404K19Rik collagen, type XXIV, alpha 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-18 chr17 37069859 37070082 + 3.03427613622886 NA intron (NM_019439, intron 18 of 22) intron (NM_019439, intron 18 of 22) 16266 NM_146477 258469 Mm.271392 NM_146477 ENSMUSG00000056600 Olfr90 MOR256-21|bM573K1.2 olfactory receptor 90 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-4 chr11 33843468 33843708 + 3.03427613622886 NA promoter-TSS (NM_001190885) promoter-TSS (NM_001190885) -3 NM_001290690 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-21 chr18 64895844 64896104 + 3.03427613622886 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) 8218 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-5 chr11 32534277 32534529 + 3.03427613622886 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 1137 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-14 chr15 38049402 38049651 + 3.03427613622886 NA intron (NM_001112721, intron 1 of 58) intron (NM_001112721, intron 1 of 58) 29328 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-41 chr6 99275216 99275521 + 3.03427613622886 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) -8853 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_18_3_1.97621843411839_2.9881092170592_3.03427613622886-37 chr5 35921257 35921506 + 3.03427613622886 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 28062 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak2_3_16_-2.34331283788605_2.91580642230731_3.03427613622886-14 chr4 11767478 11767720 + 3.03427613622886 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 9442 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak1_98_42_0.914581852349871_5.88355568087703_3.03314748117021 chr10 72654138 72654579 + 3.03314748117021 NA promoter-TSS (NM_001293684) promoter-TSS (NM_001293684) -488 NM_025635 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak2_35_64_-1.13065656435575_5.45703953085058_3.03298732626517 chr4 34882442 34883264 + 3.03298732626517 NA promoter-TSS (NM_013889) promoter-TSS (NM_013889) 95 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding common_peak2_67_100_-0.855435604988587_6.2304936802575_3.03280148829625 chr2 158028102 158028955 + 3.03280148829625 NA promoter-TSS (NM_001291136) promoter-TSS (NM_001291136) 31 NM_001291135 70470 Mm.290810 NM_027434 ENSMUSG00000027651 Rprd1b 2610304G08Rik|2810446G03Rik|Crept regulation of nuclear pre-mRNA domain containing 1B protein-coding unique_peak1_59_20_1.23116014284712_5.00789749420232_3.03172027028484 chr10 28076991 28077877 + 3.03172027028484 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 2614 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak1_59_20_1.23116014284712_5.00789749420232_3.03172027028484 chr8 7731830 7732733 + 3.03172027028484 NA Intergenic Intergenic 928492 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_59_20_1.23116014284712_5.00789749420232_3.03172027028484 chr19 6137451 6137800 + 3.03172027028484 NA exon (NM_019722, exon 3 of 5) exon (NM_019722, exon 3 of 5) 3512 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding unique_peak1_32_7_1.76706598439776_3.88353299219888_3.02827458119513-2 chr10 125968305 125968596 + 3.02827458119513 NA intron (NM_177152, intron 1 of 18) intron (NM_177152, intron 1 of 18) 2231 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding unique_peak1_32_7_1.76706598439776_3.88353299219888_3.02827458119513-3 chr2 152808275 152808702 + 3.02827458119513 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 20001 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak1_32_7_1.76706598439776_3.88353299219888_3.02827458119513 chr1 73964087 73964645 + 3.02827458119513 NA intron (NM_001289895, intron 18 of 32) intron (NM_001289895, intron 18 of 32) -99900 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak2_8_27_-1.90153371423841_3.8565880649384_3.02827458119512-2 chr17 35635614 35636079 + 3.02827458119512 NA TTS (NM_001033366) TTS (NM_001033366) 7849 NM_001033366 268949 Mm.296301 NM_001033366 ENSMUSG00000073408 Dpcr1 Gm630 diffuse panbronchiolitis critical region 1 (human) protein-coding unique_peak2_8_27_-1.90153371423841_3.8565880649384_3.02827458119512 chr17 31570756 31571090 + 3.02827458119512 NA intron (NM_016670, intron 1 of 10) intron (NM_016670, intron 1 of 10) 6150 NM_016670 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding unique_peak2_7_27_-2.07025989826656_3.77222497292432_3.02827458119512 chr5 105636782 105637082 + 3.02827458119512 NA Intergenic Intergenic -63037 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_14_36_-1.57186584085658_4.42352044520066_3.02795537370073-3 chr9 105131314 105132003 + 3.02795537370073 NA exon (NM_029385, exon 1 of 3) exon (NM_029385, exon 1 of 3) 147 NM_029385 75686 Mm.305810 NM_029385 ENSMUSG00000032565 Nudt16 2310041H06Rik|2810047L04Rik|2900006H04Rik|AI851783 nudix (nucleoside diphosphate linked moiety X)-type motif 16 protein-coding unique_peak2_14_36_-1.57186584085658_4.42352044520066_3.02795537370073 chr5 100623157 100623842 + 3.02795537370073 NA Intergenic Intergenic 50757 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding unique_peak2_13_36_-1.67069929226378_4.37410371949706_3.02795537370073 chr12 17389516 17390207 + 3.02795537370073 NA intron (NM_001008421, intron 13 of 20) intron (NM_001008421, intron 13 of 20) 34469 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA unique_peak2_14_36_-1.57186584085658_4.42352044520066_3.02795537370073-2 chr7 28809775 28810292 + 3.02795537370073 NA promoter-TSS (NM_177301) promoter-TSS (NM_177301) -857 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_43_12_1.47873568445597_4.43980756036908_3.02795537370072 chr4 105937995 105938544 + 3.02795537370072 NA Intergenic Intergenic -302944 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA unique_peak1_43_12_1.47873568445597_4.43980756036908_3.02795537370072-4 chr3 138212986 138213439 + 3.02795537370072 NA intron (NR_045760, intron 2 of 2) intron (NR_045760, intron 2 of 2) -4561 NM_009626 11529 Mm.8473 NM_009626 ENSMUSG00000055301 Adh7 AI325182|Adh-3|Adh-3e|Adh-3t|Adh3|Adh3-e|Adh3-t|Adh4|Adt-1 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding unique_peak1_43_12_1.47873568445597_4.43980756036908_3.02795537370072-2 chr2 92023235 92023968 + 3.02795537370072 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 569 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding unique_peak1_43_12_1.47873568445597_4.43980756036908_3.02795537370072 chr2 13451345 13451693 + 3.02795537370072 NA intron (NM_001081084, intron 17 of 66) intron (NM_001081084, intron 17 of 66) 40357 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_43_12_1.47873568445597_4.43980756036908_3.02795537370072-3 chr3 68252713 68252993 + 3.02795537370072 NA intron (NM_001113420, intron 1 of 6) intron (NM_001113420, intron 1 of 6) 188051 NM_001113421 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_194_102_0.62542018910674_6.99921062173659_3.02604673533906 chr14 51985071 51986483 + 3.02604673533906 NA TTS (NR_045728) TTS (NR_045728) 944 NM_198249 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding unique_peak1_49_15_1.36229886215231_4.68114943107615_3.02568725184407 chr5 136554818 136555388 + 3.02568725184407 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 10878 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_49_15_1.36229886215231_4.68114943107615_3.02568725184407-2 chr7 84088462 84089288 + 3.02568725184407 NA Intergenic Intergenic -2370 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-8 chr19 12793394 12793692 + 3.02403524675804 NA intron (NM_053009, intron 1 of 10) intron (NM_053009, intron 1 of 10) 2580 NR_024093 664779 Mm.290924 NM_001039718 ENSMUSG00000024695 Gm44505 Zfp91-Cntf|Zfp91Cntf predicted readthrough transcript (NMD candidate), 44505 ncRNA unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-3 chr11 31636298 31636997 + 3.02403524675804 NA Intergenic Intergenic 35215 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-5 chr14 46256974 46257371 + 3.02403524675804 NA Intergenic Intergenic -122352 NR_037981 100041724 Mm.383311 NM_001099324 ENSMUSG00000079261 Gm15217 - predicted gene 15217 ncRNA unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-11 chr4 53826228 53826446 + 3.02403524675804 NA intron (NM_028053, intron 1 of 5) intron (NM_028053, intron 1 of 5) 292 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding unique_peak2_5_23_-2.25997689512942_3.45497405315645_3.02403524675804 chr2 148514727 148515256 + 3.02403524675804 NA Intergenic Intergenic -71456 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804 chr1 5015839 5016410 + 3.02403524675804 NA intron (NM_001177795, intron 2 of 5) intron (NM_001177795, intron 2 of 5) 2610 NM_001290372 58175 Mm.103771 NM_021374 ENSMUSG00000002459 Rgs20 2900073E09Rik|Rgsz1 regulator of G-protein signaling 20 protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-6 chr15 62483944 62484304 + 3.02403524675804 NA Intergenic Intergenic -264673 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-13 chr8 45004325 45004769 + 3.02403524675804 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 54339 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-7 chr18 65704066 65704794 + 3.02403524675804 NA intron (NM_177028, intron 1 of 14) intron (NM_177028, intron 1 of 14) 6162 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-12 chr5 35042352 35042954 + 3.02403524675804 NA exon (NM_019447, exon 3 of 14) exon (NM_019447, exon 3 of 14) 1144 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-10 chr2 91064625 91065087 + 3.02403524675804 NA intron (NR_110981, intron 3 of 7) intron (NR_110981, intron 3 of 7) 5459 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-4 chr12 104811551 104812046 + 3.02403524675804 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 53278 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-9 chr2 70064126 70064623 + 3.02403524675804 NA intron (NM_177376, intron 2 of 34) intron (NM_177376, intron 2 of 34) 25248 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak1_27_5_1.94673659307077_3.55833079725654_3.02403524675804-2 chr1 71877900 71878404 + 3.02403524675804 NA Intergenic Intergenic -9960 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_142_69_0.738335536316167_6.49845078510305_3.02153464980357 chr6 58841550 58843351 + 3.02153464980357 NA intron (NM_028705, intron 1 of 24) intron (NM_028705, intron 1 of 24) 8750 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak2_165_83_0.688951218538914_6.73679303204822_3.02059385864801 chr4 137468899 137469932 + 3.02059385864801 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 612 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak2_26_52_-1.2483186240898_5.1037611425183_3.01957526180442 chr11 32553014 32553645 + 3.01957526180442 NA intron (NM_009288, intron 1 of 18) B1_Mus1|SINE|Alu 20063 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_26_52_-1.2483186240898_5.1037611425183_3.01957526180442 chr17 13759689 13760229 + 3.01957526180442 NA promoter-TSS (NM_010806) promoter-TSS (NM_010806) -582 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak1_62_22_1.16980834218982_5.10846612715192_3.01957526180442 chr4 130049567 130050471 + 3.01957526180442 NA intron (NM_028266, intron 2 of 69) intron (NM_028266, intron 2 of 69) 2179 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak1_62_22_1.16980834218982_5.10846612715192_3.01957526180442 chr12 102593807 102594715 + 3.01957526180442 NA intron (NM_172584, intron 4 of 9) intron (NM_172584, intron 4 of 9) 39320 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-5 chr13 75793715 75794122 + 3.01815507148775 NA Intergenic Intergenic -45967 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-6 chr14 21788009 21788434 + 3.01815507148775 NA intron (NM_001359953, intron 4 of 5) intron (NM_001359953, intron 4 of 5) 36669 NM_001359953 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-4 chr12 108893819 108894052 + 3.01815507148775 NA promoter-TSS (NM_177602) promoter-TSS (NM_177602) 239 NM_001164314 22375 Mm.38433 NM_011710 ENSMUSG00000021266 Wars TrpRS|WRS tryptophanyl-tRNA synthetase protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775 chr1 74240436 74240650 + 3.01815507148775 NA intron (NM_001357387, intron 2 of 10) intron (NM_001357387, intron 2 of 10) 4026 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-3 chr11 8567195 8567639 + 3.01815507148775 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 97118 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-11 chr7 141393655 141394340 + 3.01815507148775 NA intron (NM_011528, intron 1 of 7) intron (NM_011528, intron 1 of 7) 1837 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-2 chr10 12741759 12742358 + 3.01815507148775 NA intron (NM_011682, intron 8 of 73) intron (NM_011682, intron 8 of 73) 119677 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-10 chr3 142560577 142560805 + 3.01815507148775 NA intron (NM_001355403, intron 2 of 11) intron (NM_001355403, intron 2 of 11) 335 NM_001289493 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-12 chr8 60758246 60758545 + 3.01815507148775 NA Intergenic Intergenic 102838 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-9 chr2 168492200 168492598 + 3.01815507148775 NA intron (NM_001291174, intron 9 of 10) intron (NM_001291174, intron 9 of 10) 97966 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-8 chr2 165643800 165644105 + 3.01815507148775 NA intron (NM_001271962, intron 1 of 15) intron (NM_001271962, intron 1 of 15) -11346 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding unique_peak1_29_6_1.82317762314152_3.71894373362837_3.01815507148775-7 chr19 12006226 12006718 + 3.01815507148775 NA Intergenic Intergenic 30268 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_54_85_-0.927432453351159_5.96254852802652_3.01746543769812 chr4 8646658 8647529 + 3.01746543769812 NA Intergenic CpG -43313 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_70_26_1.10973323954326_5.3097541219351_3.01622027613199 chr9 56509431 56510228 + 3.01622027613199 NA Intergenic Intergenic 91210 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_214_115_0.593808474689251_7.1548852324722_3.01621950828825 chr7 25781015 25783340 + 3.01621950828825 NA intron (NM_009465, intron 4 of 19) intron (NM_009465, intron 4 of 19) 6556 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak2_28_55_-1.22538692110709_5.19466146150406_3.0148771644356 chr2 102944443 102944949 + 3.0148771644356 NA Intergenic Intergenic -43031 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_66_24_1.13769682786566_5.21270460370756_3.01487716443559 chr2 72995351 72996257 + 3.01487716443559 NA Intergenic LTR88c|LTR|Gypsy? -15358 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak1_66_24_1.13769682786566_5.21270460370756_3.01487716443559 chr1 86586795 86587572 + 3.01487716443559 NA 5' UTR (NM_172974, exon 2 of 8) 5' UTR (NM_172974, exon 2 of 8) 4262 NM_001360887 26895 Mm.12973 NM_172974 ENSMUSG00000026240 Cops7b D1Wsu66e|E130114M23 COP9 signalosome subunit 7B protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-30 chr3 105204201 105204390 + 3.01029995663981 NA Intergenic Intergenic 137451 NM_029228 75269 Mm.307994 NM_029228 ENSMUSG00000051788 4930564D02Rik - RIKEN cDNA 4930564D02 gene protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-16 chr12 17757536 17757771 + 3.01029995663981 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 66844 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-41 chr7 139737607 139737833 + 3.01029995663981 NA Intergenic Intergenic -41298 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-23 chr16 24752173 24752413 + 3.01029995663981 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 30438 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-10 chr11 49035324 49035555 + 3.01029995663981 NA Intergenic Intergenic 15803 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-38 chr7 66443398 66443597 + 3.01029995663981 NA Intergenic Intergenic -16020 NM_053080 56847 Mm.140988 NM_053080 ENSMUSG00000015134 Aldh1a3 ALDH6|RALDH3|V1 aldehyde dehydrogenase family 1, subfamily A3 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-26 chr17 81542812 81543013 + 3.01029995663981 NA intron (NR_104580, intron 2 of 8) MER5A1|DNA|hAT-Charlie 195475 NM_001286684 20541 Mm.265834 NM_011406 ENSMUSG00000054640 Slc8a1 AI852629|AV344025|D930008O12Rik|Ncx1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-8 chr10 9676939 9677138 + 3.01029995663981 NA Intergenic Intergenic -1830 NM_177271 320825 Mm.101115 NM_177271 ENSMUSG00000060487 Samd5 E130306M17Rik sterile alpha motif domain containing 5 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-35 chr6 38828213 38828405 + 3.01029995663981 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 9002 NM_001136065 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-27 chr18 16669975 16670193 + 3.01029995663981 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 139162 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-19 chr14 66865472 66865680 + 3.01029995663981 NA intron (NM_009955, intron 1 of 13) intron (NM_009955, intron 1 of 13) 3024 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-39 chr7 67997677 67997928 + 3.01029995663981 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 45545 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-3 chr1 43864161 43864355 + 3.01029995663981 NA Intergenic Intergenic -36550 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-14 chr11 88117965 88118233 + 3.01029995663981 NA intron (NM_198013, intron 1 of 10) G-rich|Low_complexity|Low_complexity 18953 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-11 chr11 70671046 70671273 + 3.01029995663981 NA intron (NM_001190379, intron 17 of 20) intron (NM_001190379, intron 17 of 20) -1743 NM_001167669 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-6 chr1 90833498 90833800 + 3.01029995663981 NA intron (NM_001243009, intron 1 of 40) intron (NM_001243009, intron 1 of 40) 10322 NM_001243008 12835 Mm.7562 NM_009935 ENSMUSG00000048126 Col6a3 AI507288|Col6a-3 collagen, type VI, alpha 3 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-25 chr17 47249275 47249551 + 3.01029995663981 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 19183 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-9 chr10 79745449 79745716 + 3.01029995663981 NA intron (NM_172551, intron 2 of 20) intron (NM_172551, intron 2 of 20) 999 NM_172551 216151 Mm.39001 NM_172551 ENSMUSG00000020329 Polrmt 1110018N15Rik|4932416K13 polymerase (RNA) mitochondrial (DNA directed) protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-36 chr6 39514751 39514957 + 3.01029995663981 NA intron (NM_172477, intron 2 of 18) intron (NM_172477, intron 2 of 18) 42980 NM_172477 209773 Mm.440021 NM_172477 ENSMUSG00000038456 Dennd2a B930096L08Rik|C130031G22|mKIAA1277 DENN/MADD domain containing 2A protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-44 chrX 95950466 95950750 + 3.01029995663981 NA intron (NM_152822, intron 6 of 12) intron (NM_152822, intron 6 of 12) 6366 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-20 chr15 36853802 36854106 + 3.01029995663981 NA Intergenic CT-rich|Low_complexity|Low_complexity -57025 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-24 chr17 12209982 12210207 + 3.01029995663981 NA intron (NM_026644, intron 3 of 8) intron (NM_026644, intron 3 of 8) 90810 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-33 chr5 108463248 108463501 + 3.01029995663981 NA intron (NM_172716, intron 1 of 10) intron (NM_172716, intron 1 of 10) 2042 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-5 chr1 75503643 75503858 + 3.01029995663981 NA exon (NM_178884, exon 2 of 20) exon (NM_178884, exon 2 of 20) 2702 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-29 chr3 88520319 88520506 + 3.01029995663981 NA Intergenic Intergenic -11983 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-34 chr6 30340105 30340356 + 3.01029995663981 NA Intergenic Intergenic -35691 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-4 chr1 73959603 73959889 + 3.01029995663981 NA intron (NM_001289895, intron 18 of 32) intron (NM_001289895, intron 18 of 32) -95280 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-15 chr11 118426042 118426229 + 3.01029995663981 NA Intergenic Intergenic -2322 NM_001204129 56745 Mm.23845 NM_019959 ENSMUSG00000017446 C1qtnf1 1600017K21Rik|CTRP1|Zsig37 C1q and tumor necrosis factor related protein 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-31 chr4 43037735 43037943 + 3.01029995663981 NA intron (NR_045567, intron 1 of 7) B1_Mus1|SINE|Alu 2462 NM_001253353 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-42 chr8 95431866 95432117 + 3.01029995663981 NA intron (NM_008187, intron 1 of 5) intron (NM_008187, intron 1 of 5) 2878 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-22 chr16 20679701 20679967 + 3.01029995663981 NA exon (NM_001304432, exon 9 of 32) exon (NM_001304432, exon 9 of 32) -4422 NR_028530 100217430 NR_028530 Snord66 MBII-142|snoRNA142 small nucleolar RNA, C/D box 66 snoRNA unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-12 chr11 76056625 76056813 + 3.01029995663981 NA intron (NM_026664, intron 19 of 21) intron (NM_026664, intron 19 of 21) -28937 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-7 chr1 177444725 177444919 + 3.01029995663981 NA promoter-TSS (NM_013915) promoter-TSS (NM_013915) -116 NM_001355102 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238.|zfp-238 zinc finger and BTB domain containing 18 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-43 chr9 54555208 54555402 + 3.01029995663981 NA intron (NM_019686, intron 1 of 5) intron (NM_019686, intron 1 of 5) 4774 NM_019686 56506 Mm.42192 NM_019686 ENSMUSG00000037493 Cib2 2810434I23Rik|AI449053 calcium and integrin binding family member 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-21 chr15 39051671 39051890 + 3.01029995663981 NA Intergenic Intergenic -25152 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-32 chr5 5675727 5675924 + 3.01029995663981 NA intron (NM_028734, intron 5 of 5) intron (NM_028734, intron 5 of 5) -11593 NM_172447 207686 Mm.319007 NM_172447 ENSMUSG00000040473 Cfap69 4921525K03|A330021E22Rik|AI427898 cilia and flagella associated protein 69 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-28 chr18 38388224 38388414 + 3.01029995663981 NA Intergenic Intergenic -30588 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-2 chr1 21059148 21059411 + 3.01029995663981 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 19946 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-18 chr13 63944546 63944762 + 3.01029995663981 NA Intergenic Intergenic 129414 NM_023507 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-17 chr12 69417518 69417734 + 3.01029995663981 NA Intergenic Intergenic 45476 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-13 chr11 83562505 83562725 + 3.01029995663981 NA Intergenic Intergenic 16021 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-40 chr7 112152390 112152596 + 3.01029995663981 NA intron (NM_001360257, intron 2 of 7) intron (NM_001360257, intron 2 of 7) 6203 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981 chr1 11092263 11092473 + 3.01029995663981 NA intron (NM_029525, intron 6 of 39) intron (NM_029525, intron 6 of 39) 98903 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak1_10_0_3.19328536174355_1.59664268087177_3.01029995663981-37 chr7 19577742 19577961 + 3.01029995663981 NA exon (NM_022409, exon 2 of 3) exon (NM_022409, exon 2 of 3) 564 NM_022409 63872 Mm.23310 NM_022409 ENSMUSG00000011267 Zfp296 2210018A16Rik|Znf296 zinc finger protein 296 protein-coding common_peak2_42_71_-1.02368247123288_5.65808376582587_3.00951212929436 chr1 182090555 182091308 + 3.00951212929436 NA Intergenic Intergenic -33806 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_42_71_-1.02368247123288_5.65808376582587_3.00951212929436-2 chr15 96770658 96771574 + 3.00951212929436 NA Intergenic Intergenic -71388 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak2_41_71_-1.05739030542293_5.64122984873085_3.00951212929436 chr4 62737187 62737995 + 3.00951212929436 NA Intergenic Intergenic 63617 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_86_35_0.985823622162409_5.66283681252352_3.00951212929435 chr3 81027808 81028566 + 3.00951212929435 NA Intergenic Intergenic -8229 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_48_78_-0.970422604811048_5.81856944577158_3.0062712848669 chr17 33629042 33629560 + 3.0062712848669 NA intron (NM_026712, intron 1 of 5) CpG 209 NM_026712 328801 Mm.181488 NM_026712 ENSMUSG00000073423 Zfp414 0610030H11Rik|Znf414 zinc finger protein 414 protein-coding common_peak1_133_63_0.774498038067144_6.38724901903357_3.00523927287399 chr7 24530656 24531779 + 3.00523927287399 NA intron (NM_153134, intron 1 of 2) B1_Mur1|SINE|Alu 569 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding common_peak1_76_109_-0.800525261353471_6.38109708284792_3.00523927287396 chr10 81105483 81106306 + 3.00523927287396 NA promoter-TSS (NM_001347144) promoter-TSS (NM_001347144) -21 NM_023138 26396 Mm.275436 NM_023138 ENSMUSG00000035027 Map2k2 AA589381|MEK2|MK2|Prkmk2 mitogen-activated protein kinase kinase 2 protein-coding unique_peak1_149_73_0.726626119177569_6.57276642521773_3.0035980655618 chr15 36854771 36856471 + 3.0035980655618 NA Intergenic Intergenic -58692 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_157_192_-0.581944350566048_7.30148486198506_3.00345174152258 chr19 45057783 45059045 + 3.00345174152258 NA Intergenic Intergenic 10838 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak1_128_60_0.789285815300756_6.32538024521326_3.00007991028849 chr4 139574716 139576153 + 3.00007991028849 NA exon (NM_001205173, exon 1 of 9) exon (NM_001205173, exon 1 of 9) 714 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding unique_peak1_82_33_1.00086077964058_5.58789323107063_2.99016688567355 chr2 173253069 173254136 + 2.99016688567355 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 22931 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_39_68_-1.06588249337974_5.5755832100883_2.99016688567355 chr13 23750029 23750376 + 2.99016688567355 NA promoter-TSS (NM_175660) promoter-TSS (NM_175660) -886 NM_175660 319172 Mm.423402 NM_175660 ENSMUSG00000061615 Hist1h2ab H2A.1|H2a-53 histone cluster 1, H2ab protein-coding common_peak1_155_77_0.706861598673831_6.63883301819916_2.98945335592042 chr7 116287018 116288359 + 2.98945335592042 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 20688 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_20_44_-1.37226342073705_4.80572138596115_2.98828922433295 chr12 29957220 29957830 + 2.98828922433295 NA intron (NM_181395, intron 1 of 22) intron (NM_181395, intron 1 of 22) 19489 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding unique_peak2_20_44_-1.37226342073705_4.80572138596115_2.98828922433295-2 chr6 72962043 72962351 + 2.98828922433295 NA Intergenic Intergenic -3449 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak2_19_44_-1.442156153358_4.77077501965067_2.98828922433295 chr8 121229114 121229660 + 2.98828922433295 NA Intergenic Intergenic 101702 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak1_52_17_1.27584505382755_4.80784752835609_2.98828922433294-2 chr14 54571348 54571942 + 2.98828922433294 NA exon (NM_010590, exon 4 of 8) exon (NM_010590, exon 4 of 8) 6016 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_52_17_1.27584505382755_4.80784752835609_2.98828922433294 chr5 105499846 105500374 + 2.98828922433294 NA Intergenic Intergenic -19361 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_52_17_1.27584505382755_4.80784752835609_2.98828922433294 chr15 73434340 73434838 + 2.98828922433294 NA Intergenic (TCC)n|Simple_repeat|Simple_repeat -11398 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding unique_peak1_52_17_1.27584505382755_4.80784752835609_2.98828922433294 chr11 118212241 118213248 + 2.98828922433294 NA promoter-TSS (NM_001112700) promoter-TSS (NM_001112700) -2 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_53_17_1.30262184945785_4.82123592617124_2.98828922433294 chr14 70136385 70136848 + 2.98828922433294 NA intron (NM_021328, intron 8 of 8) intron (NM_021328, intron 8 of 8) 17175 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding common_peak2_99_43_0.895812263941766_5.90733775060818_2.98790731304152 chr10 72654126 72654598 + 2.98790731304152 NA promoter-TSS (NM_001293684) promoter-TSS (NM_001293684) -484 NM_025635 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak1_158_193_-0.580362164263057_7.3097317600556_2.98650032057278 chr8 106511199 106512433 + 2.98650032057278 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 964 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_139_67_0.749783192148977_6.46235443732483_2.98180199283537 chr11 17159368 17160296 + 2.98180199283537 NA intron (NM_024459, intron 1 of 5) CpG 534 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak1_139_67_0.749783192148977_6.46235443732483_2.98180199283537-2 chr19 5460273 5461398 + 2.98180199283537 NA intron (NM_021438, intron 1 of 9) intron (NM_021438, intron 1 of 9) 228 NM_021438 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding common_peak1_91_38_0.950396103360762_5.76060027054263_2.98092681788371 chr1 75142193 75143138 + 2.98092681788371 NA promoter-TSS (NM_001305232) promoter-TSS (NM_001305232) 46 NM_026977 69171 Mm.28193 NM_026977 ENSMUSG00000033159 Cnppd1 1810031K17Rik|AU043960 cyclin Pas1/PHO80 domain containing 1 protein-coding common_peak1_91_38_0.950396103360762_5.76060027054263_2.98092681788371-3 chr9 45845038 45845665 + 2.98092681788371 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 6806 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak2_90_38_0.93474002559375_5.75277223165912_2.98092681788371 chr10 4266395 4267099 + 2.98092681788371 NA intron (NM_031185, intron 1 of 3) CpG 418 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak1_91_38_0.950396103360762_5.76060027054263_2.98092681788371 chr8 64643032 64644227 + 2.98092681788371 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 49480 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_91_38_0.950396103360762_5.76060027054263_2.98092681788371-2 chr3 90213175 90213646 + 2.98092681788371 NA promoter-TSS (NM_001293741) promoter-TSS (NM_001293741) 237 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding unique_peak1_40_11_1.49305204645253_4.33148852394742_2.97841939682983 chr14 52016301 52016844 + 2.97841939682983 NA promoter-TSS (NM_001033805) promoter-TSS (NM_001033805) -293 NM_001033805 619301 Mm.475177 NM_001033805 ENSMUSG00000072571 Tmem253 G630016D24Rik transmembrane protein 253 protein-coding unique_peak1_40_11_1.49305204645253_4.33148852394742_2.97841939682983-2 chr19 17262058 17262500 + 2.97841939682983 NA Intergenic Intergenic 77226 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_396_239_0.423458959273453_8.11862007524524_2.97738141111346 chr3 95658257 95660359 + 2.97738141111346 NA exon (NM_008562, exon 1 of 3) exon (NM_008562, exon 1 of 3) 587 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_167_85_0.672159982170794_6.76234474578749_2.9706550911687 chr11 80428655 80430408 + 2.9706550911687 NA intron (NM_178616, intron 1 of 13) intron (NM_178616, intron 1 of 13) 916 NM_178616 69077 Mm.260539 NM_178616 ENSMUSG00000017428 Psmd11 1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding unique_peak1_46_14_1.36677070769354_4.59027594945529_2.96631085054195 chr5 5558929 5559450 + 2.96631085054195 NA intron (NM_153116, intron 1 of 9) intron (NM_153116, intron 1 of 9) 352 NM_153116 207704 Mm.323984 NM_153116 ENSMUSG00000040464 Gtpbp10 4930545J22Rik|BC034507 GTP-binding protein 10 (putative) protein-coding unique_peak2_16_39_-1.50504225797767_4.56940696589853_2.96631085054194 chr19 6876467 6876951 + 2.96631085054194 NA Intergenic PB1D9|SINE|Alu -18498 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding unique_peak1_56_19_1.22807096188524_4.93596357582998_2.96402770480589 chr12 73964577 73965247 + 2.96402770480589 NA intron (NM_178392, intron 1 of 9) CpG 382 NM_178392 75627 Mm.25937 NM_178392 ENSMUSG00000021113 Snapc1 2700033G17Rik|AU015787 small nuclear RNA activating complex, polypeptide 1 protein-coding common_peak1_145_71_0.727435454550371_6.5336427287175_2.96297615554841 chr8 95141746 95142539 + 2.96297615554841 NA intron (NM_010631, intron 1 of 19) intron (NM_010631, intron 1 of 19) 398 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_145_71_0.727435454550371_6.5336427287175_2.96297615554841 chr2 71543384 71544636 + 2.96297615554841 NA 3' UTR (NM_010054, exon 3 of 3) 3' UTR (NM_010054, exon 3 of 3) 2744 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak1_192_101_0.624727028498697_6.98478885622084_2.96158891875435 chr4 57782263 57783881 + 2.96158891875435 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -62176 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak2_34_62_-1.12592393095411_5.41431795802286_2.95981958782823 chr8 22806855 22808073 + 2.95981958782823 NA Intergenic Intergenic -1810 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak1_49_79_-0.959629232735054_5.84211347851984_2.95955828708081 chr7 112202445 112202972 + 2.95955828708081 NA Intergenic Intergenic -23128 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_43_72_-1.01064915628296_5.68449998073854_2.95733370545705-2 chr12 81781400 81782507 + 2.95733370545705 NA promoter-TSS (NM_177395) promoter-TSS (NM_177395) -783 NM_001174107 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_43_72_-1.01064915628296_5.68449998073854_2.95733370545705 chr1 72755415 72756405 + 2.95733370545705 NA Intergenic Intergenic 44650 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak2_24_50_-1.30307150024594_5.02088959184852_2.94992233496554 chr10 19150065 19150856 + 2.94992233496554 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) 8711 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_60_21_1.18772445066558_5.05329384397009_2.94992233496554 chr1 125677273 125677847 + 2.94992233496554 NA exon (NM_027677, exon 1 of 2) exon (NM_027677, exon 1 of 2) 564 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding unique_peak2_24_50_-1.30307150024594_5.02088959184852_2.94992233496554 chrX 170675098 170675786 + 2.94992233496554 NA intron (NM_001308488, intron 4 of 7) intron (NM_001308488, intron 4 of 7) 2798 NM_001199212 107626 Mm.486144 NM_001199212 ENSMUSG00000093806 Asmt Hiomt acetylserotonin O-methyltransferase protein-coding unique_peak2_25_50_-1.24688716751638_5.0489817582133_2.94992233496554 chr2 4543057 4543647 + 2.94992233496554 NA intron (NM_001177843, intron 11 of 23) intron (NM_001177843, intron 11 of 23) -16402 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_24_50_-1.30307150024594_5.02088959184852_2.94992233496554-2 chr12 99260774 99261245 + 2.94992233496554 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -98201 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA common_peak2_24_50_-1.30307150024594_5.02088959184852_2.94992233496554-3 chr2 5316444 5317346 + 2.94992233496554 NA intron (NM_001290374, intron 5 of 9) intron (NM_001290374, intron 5 of 9) -62495 NR_030601 100124465 NR_030601 ENSMUSG00000078031 Mir466d Mirn466d microRNA 466d ncRNA common_peak2_24_50_-1.30307150024594_5.02088959184852_2.94992233496554-4 chrX 102188187 102189087 + 2.94992233496554 NA intron (NM_009094, intron 1 of 6) intron (NM_009094, intron 1 of 6) 754 NM_009094 20102 Mm.66 NM_009094 ENSMUSG00000031320 Rps4x Rps4|Rps4-1 ribosomal protein S4, X-linked protein-coding unique_peak1_71_27_1.07730134704186_5.34600559557853_2.94983313499873-2 chr9 21797600 21798506 + 2.94983313499873 NA intron (NM_145611, intron 1 of 11) intron (NM_145611, intron 1 of 11) 493 NM_145611 235041 Mm.257371 NM_145611 ENSMUSG00000032194 Kank2 AI504612|Ankrd25|BC010245 KN motif and ankyrin repeat domains 2 protein-coding unique_peak1_71_27_1.07730134704186_5.34600559557853_2.94983313499873 chr11 87590966 87591706 + 2.94983313499873 NA promoter-TSS (NM_001357901) promoter-TSS (NM_001357901) -830 NM_001357901 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_151_75_0.707125981955073_6.60149050442112_2.94812064175932 chr15 85534657 85535848 + 2.94812064175932 NA TTS (NM_001163634) TTS (NM_001163634) -32025 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak2_151_75_0.707125981955073_6.60149050442112_2.94812064175932 chr3 122245752 122246803 + 2.94812064175932 NA intron (NM_008129, intron 1 of 6) intron (NM_008129, intron 1 of 6) 720 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak1_67_25_1.10233615962212_5.25160779795215_2.94420284442398-2 chr9 64696915 64697974 + 2.94420284442398 NA intron (NM_001134399, intron 21 of 24) intron (NM_001134399, intron 21 of 24) 40312 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_67_25_1.10233615962212_5.25160779795215_2.94420284442398 chr14 65112212 65112732 + 2.94420284442398 NA Intergenic Intergenic -14366 NM_001360385 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_67_25_1.10233615962212_5.25160779795215_2.94420284442398-2 chr4 129189901 129190496 + 2.94420284442398 NA promoter-TSS (NM_029036) promoter-TSS (NM_029036) 403 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding unique_peak1_67_25_1.10233615962212_5.25160779795215_2.94420284442398 chr4 11321348 11322081 + 2.94420284442398 NA intron (NM_001081201, intron 1 of 18) intron (NM_001081201, intron 1 of 18) 417 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak1_67_25_1.10233615962212_5.25160779795215_2.94420284442398 chr19 5088627 5089153 + 2.94420284442398 NA intron (NM_026553, intron 1 of 7) intron (NM_026553, intron 1 of 7) 352 NM_026553 68090 Mm.44202 NM_026553 ENSMUSG00000024875 Yif1a 5330422J23Rik|54TM|Yif1|Yif1p Yip1 interacting factor homolog A (S. cerevisiae) protein-coding common_peak1_101_44_0.891758383660987_5.93773228816017_2.9441663161895 chr14 67932354 67933554 + 2.9441663161895 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) 618 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_53_83_-0.919770571878601_5.93243213683946_2.9441663161895 chr2 180442970 180444247 + 2.9441663161895 NA Intergenic Intergenic -12637 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak2_52_83_-0.9465473675089_5.91904373902431_2.9441663161895 chr11 60699691 60700487 + 2.9441663161895 NA intron (NM_008502, intron 1 of 20) intron (NM_008502, intron 1 of 20) 399 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 LLGL1 scribble cell polarity complex component protein-coding unique_peak1_63_23_1.13096758435015_5.15044629289623_2.94383797003288 chr19 55700318 55700971 + 2.94383797003288 NA intron (NR_045318, intron 1 of 3) intron (NR_045318, intron 1 of 3) 1560 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_231_263_-0.483591057127676_7.80259859079462_2.94365834258817 chr13 58401534 58403420 + 2.94365834258817 NA promoter-TSS (NM_001301343) promoter-TSS (NM_001301343) 35 NR_153504 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding common_peak2_114_148_-0.663713299485273_6.88731187071953_2.93972249590839 chr4 135312285 135313994 + 2.93972249590839 NA Intergenic Intergenic 40075 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_83_34_0.97619669950117_5.61738136669555_2.93575584472861 chr7 139780697 139781719 + 2.93575584472861 NA Intergenic Intergenic 2190 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA common_peak1_56_87_-0.909432561864696_6.00471533770495_2.93378073455177 chr13 42052124 42052883 + 2.93378073455177 NA intron (NM_007772, intron 1 of 8) CpG 482 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_105_47_0.85375257497546_6.01183878820889_2.93378073455177 chr1 21007730 21008673 + 2.93378073455177 NA intron (NM_177409, intron 4 of 10) intron (NM_177409, intron 4 of 10) 56575 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding unique_peak1_38_10_1.54694215804527_4.23290269765993_2.93261892307636-2 chr18 24765405 24765835 + 2.93261892307636 NA intron (NM_001289654, intron 2 of 24) intron (NM_001289654, intron 2 of 24) 56997 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak2_11_32_-1.72646349333996_4.18116237268847_2.93261892307636-2 chr9 69467896 69468342 + 2.93261892307636 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 11175 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA unique_peak1_38_10_1.54694215804527_4.23290269765993_2.93261892307636-4 chr4 45516724 45517441 + 2.93261892307636 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 13746 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_38_10_1.54694215804527_4.23290269765993_2.93261892307636 chr1 162241893 162242403 + 2.93261892307636 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 18780 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA unique_peak2_11_32_-1.72646349333996_4.18116237268847_2.93261892307636 chr8 36669824 36670308 + 2.93261892307636 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -56123 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_38_10_1.54694215804527_4.23290269765993_2.93261892307636 chr16 91538332 91538591 + 2.93261892307636 NA Intergenic Intergenic -8633 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding unique_peak1_38_10_1.54694215804527_4.23290269765993_2.93261892307636-3 chr2 58484695 58485524 + 2.93261892307636 NA intron (NM_001355048, intron 3 of 10) intron (NM_001355048, intron 3 of 10) 76301 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak1_38_10_1.54694215804527_4.23290269765993_2.93261892307636-2 chr2 35714022 35714577 + 2.93261892307636 NA intron (NM_001001602, intron 6 of 13) intron (NM_001001602, intron 6 of 13) 17567 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_125_59_0.779424723065072_6.29660295714105_2.92895976884201 chr16 33833107 33834534 + 2.92895976884201 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 4155 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_101_134_-0.693204117060169_6.73021353852075_2.9283014577153 chr8 124020628 124021855 + 2.9283014577153 NA promoter-TSS (NM_001357315) promoter-TSS (NM_001357315) 156 NM_133966 102162 Mm.291777 NM_133966 ENSMUSG00000038697 Taf5l 1110005N04Rik|AI849020 TATA-box binding protein associated factor 5 like protein-coding common_peak1_110_50_0.832316021740158_6.08858335284157_2.9276314178972 chr2 166154362 166155579 + 2.9276314178972 NA 5' UTR (NM_001252578, exon 1 of 21) 5' UTR (NM_001252578, exon 1 of 21) 315 NM_001355619 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_60_91_-0.876405886754137_6.08535901267994_2.92763141789719 chr8 25015904 25016834 + 2.92763141789719 NA promoter-TSS (NM_027194) promoter-TSS (NM_027194) 553 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak2_67_99_-0.841080312011517_6.22331603376897_2.92567988469054 chr2 29964834 29966168 + 2.92567988469054 NA promoter-TSS (NM_001309460) promoter-TSS (NM_001309460) -59 NM_001177668 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding common_peak1_115_53_0.812970539640554_6.16137277198374_2.92509906676189 chr15 77152757 77153858 + 2.92509906676189 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 505 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak1_50_16_1.30320361831357_4.73906465040712_2.92433603673115 chr10 83146318 83147073 + 2.92433603673115 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 161198 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_50_16_1.30320361831357_4.73906465040712_2.92433603673115-2 chr4 134127968 134128639 + 2.92433603673115 NA intron (NM_080559, intron 1 of 2) intron (NM_080559, intron 1 of 2) 450 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding common_peak1_50_16_1.30320361831357_4.73906465040712_2.92433603673115 chr17 35919295 35919869 + 2.92433603673115 NA 5' UTR (NM_001357740, exon 1 of 19) 5' UTR (NM_001357740, exon 1 of 19) 310 NM_001357740 52040 Mm.29385 NM_175934 ENSMUSG00000039220 Ppp1r10 2610025H06Rik|Cat53|D17Ertd808e|Fb19|Pnuts protein phosphatase 1, regulatory subunit 10 protein-coding common_peak1_141_69_0.728282745188522_6.49342438953923_2.92252345013616 chr15 85522913 85524339 + 2.92252345013616 NA Intergenic Intergenic -20399 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak1_80_32_1.00898833376916_5.54888828624303_2.91651320486994 chr19 16251261 16252404 + 2.91651320486994 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 63172 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak1_80_32_1.00898833376916_5.54888828624303_2.91651320486994-2 chr2 93902882 93903635 + 2.91651320486994 NA Intergenic Intergenic -34101 NM_001033452 381411 Mm.9889 NM_001033452 ENSMUSG00000075023 Accsl Gm1967 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like protein-coding common_peak1_79_32_0.991192864466733_5.53999055159182_2.91651320486994-2 chr4 148039108 148039915 + 2.91651320486994 NA promoter-TSS (NM_011929) promoter-TSS (NM_011929) 434 NM_010840 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 methylenetetrahydrofolate reductase protein-coding common_peak1_79_32_0.991192864466733_5.53999055159182_2.91651320486994 chr12 112794973 112795819 + 2.91651320486994 NA Intergenic Intergenic -13579 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak1_44_13_1.40401322536898_4.50936153474209_2.90875693252979-3 chr8 105553276 105553752 + 2.90875693252979 NA intron (NM_013477, intron 1 of 7) B1_Mus2|SINE|Alu 12550 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_15_37_-1.51788746922579_4.48898377883069_2.90875693252979 chr17 81064685 81065052 + 2.90875693252979 NA intron (NM_028138, intron 1 of 9) intron (NM_028138, intron 1 of 9) 217 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding common_peak1_44_13_1.40401322536898_4.50936153474209_2.90875693252979-2 chr5 115560741 115561434 + 2.90875693252979 NA intron (NM_007475, intron 3 of 6) intron (NM_007475, intron 3 of 6) 1620 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding unique_peak2_15_37_-1.51788746922579_4.48898377883069_2.90875693252979 chr4 137201002 137201660 + 2.90875693252979 NA Intergenic Intergenic -36265 NR_040443 100503595 Mm.421314 NR_040443 ENSMUSG00000085833 Gm13003 - predicted gene 13003 ncRNA unique_peak1_44_13_1.40401322536898_4.50936153474209_2.90875693252979 chr4 105213889 105214766 + 2.90875693252979 NA intron (NM_080555, intron 4 of 5) intron (NM_080555, intron 4 of 5) 56980 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_44_13_1.40401322536898_4.50936153474209_2.90875693252979 chr2 109735095 109735574 + 2.90875693252979 NA Intergenic Intergenic 12413 NM_001285422 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak1_88_37_0.940379712956342_5.71811736992176_2.90716673056922 chr1 21051875 21052594 + 2.90716673056922 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 26991 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak2_54_84_-0.910558634786763_5.95411161874432_2.90184995680294 chr6 142274417 142275120 + 2.90184995680294 NA intron (NM_001267707, intron 2 of 14) intron (NM_001267707, intron 2 of 14) 4106 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak1_54_84_-0.910558634786763_5.95411161874432_2.90184995680294 chr6 142274427 142275042 + 2.90184995680294 NA intron (NM_001267707, intron 2 of 14) intron (NM_001267707, intron 2 of 14) 4140 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak1_215_247_-0.495759418633204_7.70631660107027_2.90111975231288 chr19 10688802 10690402 + 2.90111975231288 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) 867 NM_001361959 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_171_88_0.656399140096546_6.80393300101467_2.89912403511633 chr19 7294074 7295906 + 2.89912403511633 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) 457 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_54_18_1.25090478790735_4.87337990739726_2.89693331866911 chr18 60722673 60723275 + 2.89693331866911 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 4592 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_54_18_1.25090478790735_4.87337990739726_2.89693331866911 chr18 84084593 84085528 + 2.89693331866911 NA intron (NM_001081300, intron 1 of 1) intron (NM_001081300, intron 1 of 1) 1502 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak2_72_104_-0.809830082100196_6.30933047661602_2.89610051482616 chr18 38249701 38250511 + 2.89610051482616 NA promoter-TSS (NM_024179) promoter-TSS (NM_024179) 92 NR_015475 73516 Mm.48776 NR_015475 ENSMUSG00000097080 1700086O06Rik - RIKEN cDNA 1700086O06 gene ncRNA common_peak2_116_150_-0.6582503399883_6.90927956933093_2.89609981172289 chr2 174329903 174331920 + 2.89609981172289 NA intron (NM_201616, intron 1 of 11) CpG-8943 822 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak2_58_88_-0.876332345643718_6.03756725814454_2.89387241085889 chr5 5748425 5749793 + 2.89387241085889 NA intron (NM_027399, intron 1 of 4) CpG 208 NM_027399 70358 Mm.85429 NM_027399 ENSMUSG00000015652 Steap1 2410007B19Rik|Prss24|Steap six transmembrane epithelial antigen of the prostate 1 protein-coding common_peak2_142_70_0.717871433756451_6.50868283638291_2.89386738780203 chr8 95141816 95142457 + 2.89386738780203 NA intron (NM_010631, intron 1 of 19) intron (NM_010631, intron 1 of 19) 404 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_159_193_-0.571380837935186_7.31422242321953_2.89326565325699 chr19 45057715 45059073 + 2.89326565325699 NA Intergenic Intergenic 10818 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding unique_peak2_10_30_-1.76091094864333_4.07374083606521_2.89150037906958-2 chr9 88548219 88548484 + 2.89150037906958 NA 5' UTR (NM_001142943, exon 1 of 6) 5' UTR (NM_001142943, exon 1 of 6) 331 NM_001142943 71640 Mm.259988 NM_001142943 ENSMUSG00000032425 Zfp949 4930422I07Rik|Nczf zinc finger protein 949 protein-coding unique_peak2_10_30_-1.76091094864333_4.07374083606521_2.89150037906958 chr10 76121925 76122460 + 2.89150037906958 NA Intergenic Intergenic -11174 NM_023219 64454 Mm.155678 NM_023219 ENSMUSG00000020226 Slc5a4b 2010104G07Rik|SAAT1|SGLT3-b|SGLT3b|pSGLT2 solute carrier family 5 (neutral amino acid transporters, system A), member 4b protein-coding common_peak2_10_30_-1.76091094864333_4.07374083606521_2.89150037906958 chr5 31561918 31562467 + 2.89150037906958 NA Intergenic Intergenic 9205 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_35_9_1.56978315378534_4.10681967178003_2.89150037906958 chr7 89523380 89523611 + 2.89150037906958 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 3692 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak1_35_9_1.56978315378534_4.10681967178003_2.89150037906958-3 chr14 66262340 66262790 + 2.89150037906958 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 18487 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_35_9_1.56978315378534_4.10681967178003_2.89150037906958 chr10 112613869 112614169 + 2.89150037906958 NA Intergenic Intergenic -112907 NR_040579 69355 Mm.84337 NR_040579 ENSMUSG00000100314 1700010J16Rik - RIKEN cDNA 1700010J16 gene ncRNA unique_peak1_35_9_1.56978315378534_4.10681967178003_2.89150037906958-2 chr13 21506383 21506844 + 2.89150037906958 NA promoter-TSS (NR_026798) promoter-TSS (NR_026798) -89 NR_026798 100038371 Mm.133328 NR_026798 Zfp389 - zinc finger protein 389 pseudo unique_peak1_35_9_1.56978315378534_4.10681967178003_2.89150037906958-4 chr17 78349492 78349929 + 2.89150037906958 NA intron (NM_015800, intron 11 of 16) intron (NM_015800, intron 11 of 16) 68442 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_111_51_0.817149416504344_6.10901442639326_2.88982511489533 chr5 75043935 75044480 + 2.88982511489533 NA exon (NM_028850, exon 1 of 6) exon (NM_028850, exon 1 of 6) 434 NM_028850 74277 Mm.239814 NM_028850 ENSMUSG00000029229 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 protein-coding common_peak1_111_51_0.817149416504344_6.10901442639326_2.88982511489533 chr5 75043935 75044508 + 2.88982511489533 NA exon (NM_028850, exon 1 of 6) exon (NM_028850, exon 1 of 6) 420 NM_028850 74277 Mm.239814 NM_028850 ENSMUSG00000029229 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 protein-coding unique_peak2_33_60_-1.12090648022644_5.37028409744967_2.88669436548023 chr11 115832865 115833840 + 2.88669436548023 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 9294 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak2_93_40_0.909054319110727_5.81207916417345_2.88597915544846 chr6 29609403 29610177 + 2.88597915544846 NA promoter-TSS (NM_001347079) promoter-TSS (NM_001347079) 59 NM_177296 320938 Mm.276381 NM_177296 ENSMUSG00000012535 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|Trn-SR|mKIAA4133 transportin 3 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-22 chr6 17489018 17489329 + 2.88232357121378 NA intron (NM_008591, intron 2 of 21) intron (NM_008591, intron 2 of 21) 25216 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-29 chr9 43230068 43230516 + 2.88232357121378 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 9524 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-13 chr17 28486470 28486778 + 2.88232357121378 NA promoter-TSS (NM_010220) promoter-TSS (NM_010220) -475 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378-7 chr8 90878000 90878227 + 2.88232357121378 NA intron (NM_177224, intron 2 of 39) PB1D10|SINE|Alu 49278 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-8 chr13 70837909 70838174 + 2.88232357121378 NA intron (NM_172053, intron 2 of 22) intron (NM_172053, intron 2 of 22) 3770 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-11 chr16 14112667 14112987 + 2.88232357121378 NA intron (NM_001081154, intron 26 of 26) intron (NM_001081154, intron 26 of 26) 46447 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis regulator and mRNA stability 1 protein-coding unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378-4 chr17 67731463 67731828 + 2.88232357121378 NA intron (NM_008480, intron 3 of 62) intron (NM_008480, intron 3 of 62) 34380 NM_008480 16772 Mm.303386 NM_008480 ENSMUSG00000032796 Lama1 AA408497|Lama laminin, alpha 1 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-18 chr4 47330404 47330684 + 2.88232357121378 NA Intergenic Intergenic -22678 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-15 chr19 5056257 5056517 + 2.88232357121378 NA 3' UTR (NM_145495, exon 10 of 10) 3' UTR (NM_145495, exon 10 of 10) 5579 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378-6 chr6 38809115 38809423 + 2.88232357121378 NA intron (NM_010433, intron 2 of 14) intron (NM_010433, intron 2 of 14) 28042 NM_001136065 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-12 chr16 18425496 18425755 + 2.88232357121378 NA promoter-TSS (NM_013711) promoter-TSS (NM_013711) -792 NM_001353143 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-19 chr4 57602290 57602499 + 2.88232357121378 NA intron (NM_001304544, intron 1 of 8) intron (NM_001304544, intron 1 of 8) 34146 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378-3 chr13 29627772 29627995 + 2.88232357121378 NA intron (NR_131896, intron 8 of 16) intron (NR_131896, intron 8 of 16) 227790 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding unique_peak2_3_18_-2.5037775100793_2.99603875840393_2.88232357121378-5 chr8 86843214 86843491 + 2.88232357121378 NA 3' UTR (NM_030563, exon 7 of 7) 3' UTR (NM_030563, exon 7 of 7) 41906 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-24 chr7 133089747 133090187 + 2.88232357121378 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -8107 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak2_3_18_-2.5037775100793_2.99603875840393_2.88232357121378-4 chr4 150544712 150545005 + 2.88232357121378 NA intron (NM_001085492, intron 11 of 22) intron (NM_001085492, intron 11 of 22) 107316 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-9 chr15 90567676 90568003 + 2.88232357121378 NA intron (NM_001357979, intron 9 of 18) intron (NM_001357979, intron 9 of 18) 111549 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-2 chr1 58462434 58462721 + 2.88232357121378 NA TTS (NM_001271526) TTS (NM_001271526) -17091 NM_027351 70225 Mm.340195 NM_027351 ENSMUSG00000026035 Ppil3 2310076N22Rik|2510026K04Rik|Cyp10l peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-10 chr16 13409395 13409818 + 2.88232357121378 NA intron (NM_153588, intron 13 of 14) intron (NM_153588, intron 13 of 14) -39917 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-25 chr7 145114148 145114523 + 2.88232357121378 NA Intergenic Intergenic 93784 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378 chr1 55051612 55051850 + 2.88232357121378 NA Intergenic Intergenic -1039 NM_026424 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-30 chr9 61403871 61404160 + 2.88232357121378 NA intron (NM_001083928, intron 8 of 19) intron (NM_001083928, intron 8 of 19) 31649 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-17 chr2 145783307 145783578 + 2.88232357121378 NA Intergenic Intergenic -2674 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-5 chr11 88178506 88178725 + 2.88232357121378 NA intron (NM_001172099, intron 2 of 9) MIR3|SINE|MIR 9050 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-14 chr18 52560805 52561183 + 2.88232357121378 NA Intergenic Intergenic -31127 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-26 chr8 34595884 34596144 + 2.88232357121378 NA non-coding (NR_040706, exon 3 of 5) non-coding (NR_040706, exon 3 of 5) 44302 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-4 chr1 166137938 166138162 + 2.88232357121378 NA intron (NM_001360925, intron 1 of 5) intron (NM_001360925, intron 1 of 5) 7829 NM_001360925 59290 Mm.46357 NM_021610 ENSMUSG00000000544 Gpa33 2010310L10Rik|2210401D16Rik|BB116197|mA33 glycoprotein A33 (transmembrane) protein-coding unique_peak2_3_18_-2.5037775100793_2.99603875840393_2.88232357121378-3 chr3 10012595 10012974 + 2.88232357121378 NA intron (NM_001272098, intron 1 of 2) intron (NM_001272098, intron 1 of 2) 199 NM_001272098 16592 Mm.741 NM_010634 ENSMUSG00000027533 Fabp5 E-FABP|Fabpe|Klbp|PA-FABP|mal1 fatty acid binding protein 5, epidermal protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-7 chr12 111666827 111667111 + 2.88232357121378 NA Intergenic Intergenic 5369 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-20 chr4 123815093 123815334 + 2.88232357121378 NA intron (NM_001356445, intron 2 of 6) intron (NM_001356445, intron 2 of 6) 1582 NM_001356445 230726 Mm.37334 NM_183163 ENSMUSG00000043333 Rhbdl2 9130416B15|RRP2 rhomboid like 2 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-27 chr8 126924173 126924429 + 2.88232357121378 NA Intergenic Intergenic 21620 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak2_3_18_-2.5037775100793_2.99603875840393_2.88232357121378-2 chr13 37290499 37290993 + 2.88232357121378 NA Intergenic Intergenic -54599 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding unique_peak2_3_18_-2.5037775100793_2.99603875840393_2.88232357121378 chr10 111365951 111366307 + 2.88232357121378 NA Intergenic Intergenic 67450 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-23 chr6 99327459 99327713 + 2.88232357121378 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) -61071 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-16 chr2 30065979 30066225 + 2.88232357121378 NA promoter-TSS (NM_001204875) promoter-TSS (NM_001204875) -372 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378 chr1 77748490 77748695 + 2.88232357121378 NA Intergenic Intergenic -233504 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-21 chr4 139189019 139189294 + 2.88232357121378 NA Intergenic Intergenic -3743 NM_009798 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378-5 chr19 22656764 22657064 + 2.88232357121378 NA intron (NM_177341, intron 1 of 26) intron (NM_177341, intron 1 of 26) -35705 NM_001035245 226025 Mm.131943 NM_177341 ENSMUSG00000052387 Trpm3 6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2 transient receptor potential cation channel, subfamily M, member 3 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-3 chr1 81748584 81749080 + 2.88232357121378 NA Intergenic Intergenic -383084 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-28 chr9 21647189 21647447 + 2.88232357121378 NA intron (NM_001357764, intron 11 of 34) intron (NM_001357764, intron 11 of 34) 31149 NM_001174078 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 BAF190A|Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding unique_peak1_21_3_2.1862303821703_3.09311519108515_2.88232357121378-6 chr11 96308798 96309272 + 2.88232357121378 NA Intergenic Intergenic -2125 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA unique_peak2_2_18_-2.9158869282786_2.78998404930428_2.88232357121378-2 chr11 79112192 79112425 + 2.88232357121378 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 34165 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding unique_peak2_3_18_-2.5037775100793_2.99603875840393_2.88232357121378-6 chr9 64174799 64175031 + 2.88232357121378 NA promoter-TSS (NR_028548) promoter-TSS (NR_028548) -517 NR_028548 100217453 NR_028548 ENSMUSG00000094411 Snord16a MBII-98 small nucleolar RNA, C/D box 16A snoRNA unique_peak1_57_20_1.18259559859851_4.98361522207801_2.88064294409843-2 chr4 132074477 132075212 + 2.88064294409843 NA intron (NM_001128607, intron 1 of 17) CpG 469 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak1_57_20_1.18259559859851_4.98361522207801_2.88064294409843-4 chr8 110755132 110755786 + 2.88064294409843 NA 5' UTR (NM_001135100, exon 2 of 7) 5' UTR (NM_001135100, exon 2 of 7) 29733 NM_001310591 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding common_peak1_58_20_1.20708366254392_4.99585925405072_2.88064294409843 chr11 96765815 96766511 + 2.88064294409843 NA Intergenic Intergenic 11392 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_57_20_1.18259559859851_4.98361522207801_2.88064294409843-3 chr4 148041396 148042322 + 2.88064294409843 NA intron (NR_027809, intron 2 of 12) intron (NR_027809, intron 2 of 12) 670 NM_001161798 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 methylenetetrahydrofolate reductase protein-coding unique_peak1_57_20_1.18259559859851_4.98361522207801_2.88064294409843 chr15 66870202 66871155 + 2.88064294409843 NA Intergenic Intergenic -20715 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_23_48_-1.30383419766996_4.96279274528023_2.88064294409843 chr13 33027524 33028382 + 2.88064294409843 NA intron (NM_011452, intron 1 of 6) intron (NM_011452, intron 1 of 6) 539 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding unique_peak1_58_20_1.20708366254392_4.99585925405072_2.88064294409843 chr2 156739561 156740627 + 2.88064294409843 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 18815 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak2_128_161_-0.619826850020981_7.02993657787413_2.88033594189051 chr9 72110620 72112297 + 2.88033594189051 NA promoter-TSS (NM_001253862) promoter-TSS (NM_001253862) -257 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak2_89_122_-0.738201337485901_6.57341383659629_2.87976576234654 chr2 117666786 117667705 + 2.87976576234654 NA Intergenic Intergenic 145557 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_68_26_1.06880140186024_5.28928820309359_2.87721178913355 chr15 64314877 64315846 + 2.87721178913355 NA intron (NM_001276461, intron 2 of 28) intron (NM_001276461, intron 2 of 28) -2688 NM_001276463 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_68_26_1.06880140186024_5.28928820309359_2.87721178913355-2 chrX 151047276 151048068 + 2.87721178913355 NA 5' UTR (NM_008001, exon 1 of 18) 5' UTR (NM_008001, exon 1 of 18) 502 NM_008001 14163 Mm.8142 NM_008001 ENSMUSG00000025265 Fgd1 ZFYVE3 FYVE, RhoGEF and PH domain containing 1 protein-coding common_peak1_69_26_1.08941351080909_5.29959425756801_2.87721178913355 chr1 164450570 164451302 + 2.87721178913355 NA intron (NM_009721, intron 2 of 5) intron (NM_009721, intron 2 of 5) 7419 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding unique_peak1_69_26_1.08941351080909_5.29959425756801_2.87721178913355 chr10 43540241 43540878 + 2.87721178913355 NA intron (NM_026411, intron 1 of 3) CpG 459 NM_026411 67851 Mm.209953 NM_026411 ENSMUSG00000019797 1700021F05Rik - RIKEN cDNA 1700021F05 gene protein-coding unique_peak1_69_26_1.08941351080909_5.29959425756801_2.87721178913355-2 chr15 25653197 25653995 + 2.87721178913355 NA intron (NM_019472, intron 1 of 40) intron (NM_019472, intron 1 of 40) 31046 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_68_26_1.06880140186024_5.28928820309359_2.87721178913355 chr19 57272539 57273325 + 2.87721178913355 NA Intergenic Intergenic -1028 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA common_peak1_238_132_0.548103881049104_7.32933437602574_2.87716548560971 chr17 44735778 44738006 + 2.87716548560971 NA promoter-TSS (NM_001271630) promoter-TSS (NM_001271630) -244 NM_001145920 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak1_61_22_1.14688758349577_5.0970057478049_2.87302884942463 chr12 100352959 100353941 + 2.87302884942463 NA intron (NM_001033213, intron 16 of 19) intron (NM_001033213, intron 16 of 19) 76841 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA common_peak1_61_22_1.14688758349577_5.0970057478049_2.87302884942463 chr3 95733048 95733520 + 2.87302884942463 NA TTS (NM_001252653) TTS (NM_001252653) 1689 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA common_peak2_61_22_1.14688758349577_5.0970057478049_2.87302884942463 chr15 73060598 73060989 + 2.87302884942463 NA intron (NM_001164641, intron 1 of 17) intron (NM_001164641, intron 1 of 17) 411 NM_001164641 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding unique_peak2_26_51_-1.22083788766769_5.09002077430725_2.87302884942463 chr11 67966474 67967227 + 2.87302884942463 NA intron (NM_001356314, intron 1 of 4) intron (NM_001356314, intron 1 of 4) 392 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding unique_peak1_65_24_1.11615481504979_5.20193359729962_2.87232347911589-3 chr3 88983423 88984187 + 2.87232347911589 NA exon (NM_138679, exon 2 of 27) exon (NM_138679, exon 2 of 27) 17993 NM_138679 192195 Mm.130752 NM_138679 ENSMUSG00000028053 Ash1l 8030453L17Rik|Ash1|E430018P19Rik|Kmt2h ASH1 like histone lysine methyltransferase protein-coding unique_peak1_65_24_1.11615481504979_5.20193359729962_2.87232347911589 chr19 12595753 12596463 + 2.87232347911589 NA non-coding (NR_015503, exon 1 of 2) non-coding (NR_015503, exon 1 of 2) 458 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA unique_peak1_65_24_1.11615481504979_5.20193359729962_2.87232347911589-2 chr2 155979657 155980391 + 2.87232347911589 NA intron (NM_001130000, intron 20 of 32) intron (NM_001130000, intron 20 of 32) 23466 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak2_132_64_0.741399711517579_6.39306766878724_2.87225001474784 chr3 89714701 89715851 + 2.87225001474784 NA promoter-TSS (NM_001357958) promoter-TSS (NM_001357958) 38 NM_001357958 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding common_peak1_51_81_-0.939068809736215_5.88801759974998_2.87089061697334 chr18 36454042 36454842 + 2.87089061697334 NA promoter-TSS (NM_026027) promoter-TSS (NM_026027) 53 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_154_78_0.679270710556313_6.64341610345526_2.86908916161442 chr3 87525089 87526741 + 2.86908916161442 NA 5' UTR (NM_001286844, exon 1 of 5) 5' UTR (NM_001286844, exon 1 of 5) 337 NM_001359750 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak1_73_105_-0.804014693079001_6.3259131080237_2.86406299923596 chr6 125482543 125483274 + 2.86406299923596 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 11852 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_39_67_-1.04482087785191_5.56505240232439_2.86200135898774 chr14 21051849 21052391 + 2.86200135898774 NA promoter-TSS (NM_134079) promoter-TSS (NM_134079) 322 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding unique_peak2_39_67_-1.04482087785191_5.56505240232439_2.86200135898774 chr15 11541145 11542173 + 2.86200135898774 NA Intergenic Intergenic -142001 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_81_33_0.983496726350099_5.57921120442539_2.86200135898774 chr14 76721313 76722371 + 2.86200135898774 NA Intergenic Intergenic -38289 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_47_15_1.30382066687201_4.651910333436_2.86150037395324-2 chr4 155129564 155130023 + 2.86150037395324 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 43189 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding common_peak1_47_15_1.30382066687201_4.651910333436_2.86150037395324 chr18 75861529 75861951 + 2.86150037395324 NA intron (NM_145356, intron 1 of 4) intron (NM_145356, intron 1 of 4) 41562 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding unique_peak1_48_15_1.33335814336605_4.66667907168303_2.86150037395324 chr4 129067272 129068133 + 2.86150037395324 NA intron (NM_029219, intron 1 of 8) intron (NM_029219, intron 1 of 8) 9431 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding unique_peak2_17_40_-1.45878577637213_4.62815911643202_2.86150037395323 chr9 63667498 63667899 + 2.86150037395323 NA intron (NM_016769, intron 2 of 8) intron (NM_016769, intron 2 of 8) 65052 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak2_161_82_0.671288042207445_6.71068345245065_2.86139638566607 chr14 105176351 105177899 + 2.86139638566607 NA 5' UTR (NM_134077, exon 1 of 21) 5' UTR (NM_134077, exon 1 of 21) 202 NM_134077 74213 Mm.474531 NM_134077 ENSMUSG00000022119 Rbm26 1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2 RNA binding motif protein 26 protein-coding common_peak2_55_85_-0.901620640483418_5.97545443446039_2.86088863980773 chr5 105519462 105520251 + 2.86088863980773 NA intron (NM_133897, intron 1 of 3) CpG 385 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_103_46_0.856839363630987_5.98300853349313_2.86088863980773 chr7 100607781 100608267 + 2.86088863980773 NA promoter-TSS (NR_153424) promoter-TSS (NR_153424) 277 NR_003559 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak1_89_38_0.91891094899109_5.74485769335779_2.85889490250062 chr3 88144373 88145445 + 2.85889490250062 NA intron (NM_001310593, intron 1 of 10) intron (NM_001310593, intron 1 of 10) 2537 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak2_45_74_-0.985965388699626_5.73583599614607_2.85889490250062 chr8 120216056 120216926 + 2.85889490250062 NA intron (NR_110496, intron 2 of 2) intron (NR_110496, intron 2 of 2) 11739 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_45_74_-0.985965388699626_5.73583599614607_2.85889490250062-2 chrX 77794980 77795902 + 2.85889490250062 NA intron (NM_016979, intron 1 of 8) CpG 519 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak2_70_101_-0.807804600264764_6.26852304183911_2.85793891798246 chr4 62741830 62742859 + 2.85793891798246 NA Intergenic Intergenic 68370 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_174_207_-0.543536785987897_7.42867132514714_2.85662782254665 chr10 111542786 111544774 + 2.85662782254665 NA Intergenic Intergenic 37494 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-7 chr8 61697145 61697675 + 2.85636458546265 NA intron (NM_001293772, intron 8 of 21) intron (NM_001293772, intron 8 of 21) 62688 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak2_9_28_-1.80122907258265_3.95736645883624_2.85636458546265-3 chr8 125568432 125568882 + 2.85636458546265 NA intron (NM_001357372, intron 1 of 21) intron (NM_001357372, intron 1 of 21) 1206 NM_001357372 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265 chr10 34508118 34508988 + 2.85636458546265 NA intron (NM_001358769, intron 2 of 8) intron (NM_001358769, intron 2 of 8) 25153 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding common_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-2 chr15 102202984 102203204 + 2.85636458546265 NA promoter-TSS (NM_001289694) promoter-TSS (NM_001289694) -551 NM_001289694 68744 Mm.352945 NM_153194 ENSMUSG00000046897 Zfp740 1110034O07Rik|AW548228|Znf740 zinc finger protein 740 protein-coding unique_peak2_9_28_-1.80122907258265_3.95736645883624_2.85636458546265 chr2 102898845 102899189 + 2.85636458546265 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 2648 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-4 chr2 164880054 164880429 + 2.85636458546265 NA intron (NM_146129, intron 1 of 16) intron (NM_146129, intron 1 of 16) 873 NM_146129 228866 Mm.241134 NM_146129 ENSMUSG00000039849 Pcif1 2310022K11Rik|C20orf67|F730014I05Rik PDX1 C-terminal inhibiting factor 1 protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-9 chr9 56120228 56120764 + 2.85636458546265 NA intron (NM_011193, intron 4 of 14) intron (NM_011193, intron 4 of 14) 30520 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265 chr15 13236195 13236592 + 2.85636458546265 NA Intergenic Intergenic -62718 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_9_28_-1.80122907258265_3.95736645883624_2.85636458546265-2 chr5 66602629 66603124 + 2.85636458546265 NA intron (NM_001310626, intron 1 of 15) L1MB3|LINE|L1 15941 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-6 chr7 119974772 119975142 + 2.85636458546265 NA Intergenic Intergenic 74846 NR_126475 73919 Mm.46381 NM_029610 ENSMUSG00000030922 Lyrm1 1110065L10Rik|2310004B22Rik|4930404J24Rik LYR motif containing 1 protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-3 chr18 61105036 61105399 + 2.85636458546265 NA promoter-TSS (NM_001037859) promoter-TSS (NM_001037859) -355 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-8 chr8 64688021 64688543 + 2.85636458546265 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 4827 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-2 chr16 4599832 4600315 + 2.85636458546265 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 5360 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_33_8_1.63990585589414_3.98987792938938_2.85636458546265-5 chr3 86999261 86999562 + 2.85636458546265 NA promoter-TSS (NM_007639) promoter-TSS (NM_007639) -71 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding common_peak1_167_86_0.655481241024164_6.77068411636081_2.85631907636649 chr4 41135563 41136745 + 2.85631907636649 NA exon (NM_026275, exon 1 of 5) exon (NM_026275, exon 1 of 5) 133 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding common_peak1_108_49_0.834838695353722_6.06127553745159_2.85517398671715 chr10 60277705 60278447 + 2.85517398671715 NA intron (NM_011179, intron 1 of 14) intron (NM_011179, intron 1 of 14) 448 NM_001146121 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding unique_peak1_42_12_1.44580281206834_4.42334112417526_2.85339697372352 chr14 50930427 50930913 + 2.85339697372352 NA exon (NM_001310505, exon 1 of 7) exon (NM_001310505, exon 1 of 7) 179 NM_001310506 219024 Mm.239117 NM_001033271 ENSMUSG00000035953 Tmem55b BC039161|Pip4p1 transmembrane protein 55b protein-coding unique_peak1_41_12_1.41209497787829_4.40648720708024_2.85339697372352-3 chr11 101059910 101060256 + 2.85339697372352 NA intron (NM_001243049, intron 20 of 20) intron (NM_001243049, intron 20 of 20) -10011 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding unique_peak1_42_12_1.44580281206834_4.42334112417526_2.85339697372352-2 chr15 27850385 27850873 + 2.85339697372352 NA intron (NM_001081302, intron 15 of 56) intron (NM_001081302, intron 15 of 56) -169087 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_41_12_1.41209497787829_4.40648720708024_2.85339697372352 chr10 14188581 14189031 + 2.85339697372352 NA Intergenic Intergenic 222427 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_41_12_1.41209497787829_4.40648720708024_2.85339697372352 chr14 67888231 67888954 + 2.85339697372352 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) -28847 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA unique_peak2_13_35_-1.63117092807714_4.35433953740374_2.85339697372352 chr12 10535652 10536381 + 2.85339697372352 NA Intergenic Intergenic 89628 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak1_42_12_1.44580281206834_4.42334112417526_2.85339697372352-4 chr7 125707935 125708327 + 2.85339697372352 NA promoter-TSS (NM_207239) promoter-TSS (NM_207239) 261 NM_001358287 233865 Mm.274389 NM_001081022 ENSMUSG00000032743 D430042O09Rik Kiaa0556 RIKEN cDNA D430042O09 gene protein-coding unique_peak1_41_12_1.41209497787829_4.40648720708024_2.85339697372352-2 chr11 97456474 97457178 + 2.85339697372352 NA intron (NM_021493, intron 6 of 18) intron (NM_021493, intron 6 of 18) 6666 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_42_12_1.44580281206834_4.42334112417526_2.85339697372352-3 chr19 32345784 32346122 + 2.85339697372352 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 3363 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak2_14_35_-1.53233747666994_4.40375626310734_2.85339697372352 chr5 30286344 30286836 + 2.85339697372352 NA Intergenic Intergenic 54009 NR_137634 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak1_41_12_1.41209497787829_4.40648720708024_2.85339697372352-2 chr14 121243927 121244757 + 2.85339697372352 NA intron (NM_134082, intron 13 of 26) intron (NM_134082, intron 13 of 26) -4364 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_41_12_1.41209497787829_4.40648720708024_2.85339697372352-4 chr18 31635160 31635573 + 2.85339697372352 NA 5' UTR (NM_001357555, exon 1 of 21) 5' UTR (NM_001357555, exon 1 of 21) 238 NM_001357555 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding unique_peak2_14_35_-1.53233747666994_4.40375626310734_2.85339697372352-2 chr6 54277940 54278458 + 2.85339697372352 NA intron (NM_001163640, intron 7 of 12) intron (NM_001163640, intron 7 of 12) 5377 NM_023543 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_138_68_0.718452594604917_6.46775075408063_2.85325570960693 chr5 31240365 31241947 + 2.85325570960693 NA intron (NM_147201, intron 1 of 17) CpG 238 NM_147201 192292 Mm.292040 NM_147201 ENSMUSG00000029148 Nrbp1 B230344L17Rik|Nrbp nuclear receptor binding protein 1 protein-coding common_peak1_91_123_-0.718397988163864_6.59499731630494_2.85318492677255 chr15 75269720 75271324 + 2.85318492677255 NA intron (NM_008530, intron 3 of 3) (TG)n|Simple_repeat|Simple_repeat 2101 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding common_peak2_91_123_-0.718397988163864_6.59499731630494_2.85318492677255 chr9 44406623 44408176 + 2.85318492677255 NA promoter-TSS (NM_024266) promoter-TSS (NM_024266) 149 NM_021789 60409 Mm.29814 NM_021789 ENSMUSG00000032112 Trappc4 1500017G03Rik|AI303617|HSPC172|PTD009|Sbd|Sbdn|Sdcbp2|TRS23 trafficking protein particle complex 4 protein-coding common_peak1_240_134_0.538508429057459_7.34606981157956_2.84556137182845 chr8 36094431 36096117 + 2.84556137182845 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 446 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_36_64_-1.09140707197101_5.47666427704295_2.84286792513288 chr15 99847554 99848026 + 2.84286792513288 NA intron (NM_001113545, intron 1 of 10) PB1D10|SINE|Alu -27641 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_49_78_-0.941481886024794_5.83303980516471_2.84102820933321 chr6 124712474 124713137 + 2.84102820933321 NA promoter-TSS (NM_013536) promoter-TSS (NM_013536) 516 NM_007531 12034 Mm.36241 NM_007531 ENSMUSG00000004264 Phb2 AU044498|BAP|Bap37|Bcap37|REA prohibitin 2 protein-coding common_peak2_49_78_-0.941481886024794_5.83303980516471_2.84102820933321 chr8 81015177 81015655 + 2.84102820933321 NA promoter-TSS (NM_027554) promoter-TSS (NM_027554) -510 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak2_250_279_-0.455718577423772_7.90142372823308_2.84018061660357 chr8 126592369 126593541 + 2.84018061660357 NA exon (NM_001164598, exon 1 of 2) exon (NM_001164598, exon 1 of 2) 481 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_145_72_0.707535897112665_6.54359250743635_2.8384141719309 chr3 108443621 108445039 + 2.8384141719309 NA intron (NM_011319, intron 1 of 11) intron (NM_011319, intron 1 of 11) 929 NM_011319 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding common_peak1_145_72_0.707535897112665_6.54359250743635_2.8384141719309-2 chr7 100607718 100608846 + 2.8384141719309 NA promoter-TSS (NR_153424) promoter-TSS (NR_153424) 19 NR_003559 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak2_201_233_-0.507921799899236_7.61640381963379_2.8362859789577 chr15 73422257 73424080 + 2.8362859789577 NA promoter-TSS (NM_001358045) promoter-TSS (NM_001358045) 23 NM_007982 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_202_233_-0.500847628205253_7.61994090548078_2.8362859789577 chr15 61532297 61534265 + 2.8362859789577 NA Intergenic Intergenic 241170 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-42 chr3 137157036 137157283 + 2.83420869758413 NA Intergenic Intergenic -183919 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-7 chr13 25363600 25363844 + 2.83420869758413 NA Intergenic Intergenic -93726 NM_009513 22360 Mm.4766 NM_009513 ENSMUSG00000048978 Nrsn1 Neurensin-1|Neuro-p24|Vmp neurensin 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-22 chr14 24143066 24143275 + 2.83420869758413 NA intron (NM_001163513, intron 27 of 31) intron (NM_001163513, intron 27 of 31) 54293 NR_106069 102465697 NR_106069 ENSMUSG00000105723 Mir7210 mir-7210|mmu-mir-7210 microRNA 7210 ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-47 chr4 155779003 155779193 + 2.83420869758413 NA Intergenic Intergenic -4537 NM_147776 246228 Mm.26515 NM_147776 ENSMUSG00000042116 Vwa1 4932416A11Rik|WARP von Willebrand factor A domain containing 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413 chr1 33883059 33883254 + 2.83420869758413 NA intron (NM_001310484, intron 1 of 5) intron (NM_001310484, intron 1 of 5) 24465 NM_177235 320705 Mm.336619 NM_177235 ENSMUSG00000042182 Bend6 B230209C24Rik BEN domain containing 6 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-9 chr10 28083194 28083382 + 2.83420869758413 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 8468 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-40 chr3 121370366 121370674 + 2.83420869758413 NA Intergenic Intergenic -56021 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-19 chr12 85203164 85203429 + 2.83420869758413 NA Intergenic Intergenic -16185 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-12 chr10 94525489 94525763 + 2.83420869758413 NA intron (NM_172051, intron 1 of 3) intron (NM_172051, intron 1 of 3) 10769 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-4 chr1 92175838 92176047 + 2.83420869758413 NA intron (NM_207225, intron 1 of 26) intron (NM_207225, intron 1 of 26) 4399 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-46 chr4 115368349 115368569 + 2.83420869758413 NA Intergenic Intergenic -43165 NM_172306 13118 Mm.448292 NM_172306 ENSMUSG00000078597 Cyp4a12b BC060945|Cyp4a12 cytochrome P450, family 4, subfamily a, polypeptide 12B protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-29 chr15 39169618 39169812 + 2.83420869758413 NA Intergenic Intergenic -28571 NM_001256382 116838 Mm.309296 NM_053271 ENSMUSG00000037386 Rims2 2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751 regulating synaptic membrane exocytosis 2 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-8 chr13 41664193 41664401 + 2.83420869758413 NA Intergenic Intergenic 58081 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-15 chr11 73022633 73022889 + 2.83420869758413 NA intron (NM_018883, intron 1 of 15) intron (NM_018883, intron 1 of 15) 3753 NM_018883 55984 Mm.9998 NM_018883 ENSMUSG00000020785 Camkk1 AI846603|CaMKKalpha|Camkk calcium/calmodulin-dependent protein kinase kinase 1, alpha protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-24 chr14 45320933 45321183 + 2.83420869758413 NA Intergenic Intergenic -2486 NM_015774 50527 Mm.387108 NM_015774 ENSMUSG00000021831 Ero1l ERO1-L|Ero1a ERO1-like (S. cerevisiae) protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-32 chr17 74568276 74568600 + 2.83420869758413 NA intron (NM_007566, intron 7 of 72) intron (NM_007566, intron 7 of 72) 40143 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-2 chr1 81953868 81954156 + 2.83420869758413 NA Intergenic Intergenic -177904 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-11 chr15 57229976 57230206 + 2.83420869758413 NA Intergenic Intergenic 35070 NM_001357930 210463 Mm.26555 NM_172378 ENSMUSG00000022366 Slc22a22 oat-pg solute carrier family 22 (organic cation transporter), member 22 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-16 chr7 74354997 74355244 + 2.83420869758413 NA intron (NM_001038643, intron 3 of 10) intron (NM_001038643, intron 3 of 10) 199660 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-59 chr8 126909227 126909421 + 2.83420869758413 NA Intergenic Intergenic 36597 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-9 chr13 41676429 41676677 + 2.83420869758413 NA Intergenic Intergenic 70337 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-7 chr1 193535877 193536106 + 2.83420869758413 NA Intergenic Intergenic -28461 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-10 chr10 86194661 86194876 + 2.83420869758413 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 98914 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-17 chr11 113681364 113681618 + 2.83420869758413 NA intron (NM_138598, intron 1 of 2) intron (NM_138598, intron 1 of 2) 2660 NM_138598 28081 Mm.351688 NM_138598 ENSMUSG00000041629 Fam104a D11Wsu99e family with sequence similarity 104, member A protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-39 chr3 96198001 96198191 + 2.83420869758413 NA promoter-TSS (NM_026975) promoter-TSS (NM_026975) -510 NM_026975 69168 Mm.104531 NM_026975 ENSMUSG00000015943 Bola1 1810037G04Rik bolA-like 1 (E. coli) protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-57 chr7 127842783 127843009 + 2.83420869758413 NA intron (NM_009294, intron 4 of 10) intron (NM_009294, intron 4 of 10) 1088 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-23 chr14 30551283 30551502 + 2.83420869758413 NA intron (NM_009388, intron 1 of 13) intron (NM_009388, intron 1 of 13) 2261 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-13 chr10 108381950 108382154 + 2.83420869758413 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 49863 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-2 chr1 40443183 40443440 + 2.83420869758413 NA intron (NM_001025602, intron 5 of 10) intron (NM_001025602, intron 5 of 10) 3682 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-15 chr7 6776072 6776297 + 2.83420869758413 NA intron (NM_001360502, intron 2 of 7) intron (NM_001360502, intron 2 of 7) -27403 NR_037213 100499513 NR_037213 ENSMUSG00000092815 Mir3099 mir-3099|mmu-mir-3099 microRNA 3099 ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-52 chr6 55335749 55335956 + 2.83420869758413 NA promoter-TSS (NM_007472) promoter-TSS (NM_007472) -447 NM_007472 11826 Mm.18625 NM_007472 ENSMUSG00000004655 Aqp1 CHIP28 aquaporin 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-34 chr19 37030417 37030644 + 2.83420869758413 NA intron (NM_198300, intron 10 of 10) intron (NM_198300, intron 10 of 10) 104451 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-60 chr8 128413851 128414109 + 2.83420869758413 NA intron (NM_001358959, intron 2 of 16) intron (NM_001358959, intron 2 of 16) 54739 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-11 chr10 93207486 93207721 + 2.83420869758413 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 44818 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-4 chr10 120678541 120678811 + 2.83420869758413 NA Intergenic Intergenic -87056 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-5 chr1 149858358 149858622 + 2.83420869758413 NA intron (NM_008869, intron 13 of 17) intron (NM_008869, intron 13 of 17) 63949 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-58 chr8 61619484 61619705 + 2.83420869758413 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -28425 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-38 chr3 89914233 89914459 + 2.83420869758413 NA Intergenic Intergenic -1150 NM_010559 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-14 chr4 141541783 141542064 + 2.83420869758413 NA Intergenic Intergenic -3326 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-31 chr17 6763557 6763826 + 2.83420869758413 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 19089 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-14 chr10 120623243 120623435 + 2.83420869758413 NA Intergenic Intergenic -142393 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-33 chr18 44454025 44454222 + 2.83420869758413 NA intron (NM_001085373, intron 14 of 18) intron (NM_001085373, intron 14 of 18) 73623 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-53 chr6 55471282 55471497 + 2.83420869758413 NA intron (NM_001025372, intron 3 of 15) intron (NM_001025372, intron 3 of 15) 19411 NM_007407 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-61 chr9 47250626 47250892 + 2.83420869758413 NA Intergenic Intergenic 252018 NM_001243258 215467 Mm.246572 NM_001243258 ENSMUSG00000094893 Gm4791 D930036J05 predicted gene 4791 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-26 chr14 69441722 69441951 + 2.83420869758413 NA Intergenic Intergenic 70713 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-25 chr14 65100965 65101282 + 2.83420869758413 NA Intergenic Intergenic -3017 NM_001360385 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-30 chr16 45356228 45356494 + 2.83420869758413 NA Intergenic Intergenic 52692 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-13 chr2 168872431 168872630 + 2.83420869758413 NA Intergenic Intergenic 83057 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-54 chr6 58839312 58839555 + 2.83420869758413 NA intron (NM_028705, intron 1 of 24) intron (NM_028705, intron 1 of 24) 5733 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-5 chr11 88996760 88996994 + 2.83420869758413 NA Intergenic Intergenic -2526 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-45 chr4 114359694 114359912 + 2.83420869758413 NA Intergenic Intergenic -46921 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-8 chr1 194955859 194956085 + 2.83420869758413 NA non-coding (NR_033564, exon 5 of 5) non-coding (NR_033564, exon 5 of 5) 17151 NM_133654 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-37 chr3 40550279 40550530 + 2.83420869758413 NA intron (NM_175515, intron 1 of 15) intron (NM_175515, intron 1 of 15) 9637 NM_175515 380614 Mm.105309 NM_175515 ENSMUSG00000060798 Intu 9230116I04Rik|9430087H23Rik|Pdzd6|Pdzk6|mKIAA1284 inturned planar cell polarity protein protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-56 chr7 101088631 101088838 + 2.83420869758413 NA Intergenic Intergenic -20041 NM_001146010 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-12 chr2 130888388 130888604 + 2.83420869758413 NA intron (NR_015523, intron 1 of 2) intron (NR_015523, intron 1 of 2) 17900 NR_015523 613258 Mm.271990 NR_015523 A730017L22Rik - RIKEN cDNA A730017L22 gene ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-44 chr4 107108251 107108452 + 2.83420869758413 NA TTS (NM_172873) TTS (NM_172873) 11460 NM_172873 242603 Mm.257231 NM_172873 ENSMUSG00000047636 Cdcp2 D030010E02Rik CUB domain containing protein 2 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-21 chr13 43041257 43041523 + 2.83420869758413 NA intron (NM_001005740, intron 3 of 12) intron (NM_001005740, intron 3 of 12) -81449 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-55 chr7 65420662 65420851 + 2.83420869758413 NA Intergenic Intergenic -49512 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-3 chr1 59579346 59579557 + 2.83420869758413 NA intron (NM_001013771, intron 11 of 19) intron (NM_001013771, intron 11 of 19) 55157 NM_001357842 381260 Mm.486706 NM_001013771 ENSMUSG00000047361 Gm973 AW554518 predicted gene 973 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413 chr1 14762821 14763039 + 2.83420869758413 NA Intergenic Intergenic -6964 NM_010827 17681 Mm.5820 NM_010827 ENSMUSG00000025930 Msc MyoR|bHLHa22 musculin protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-35 chr2 26533486 26533757 + 2.83420869758413 NA Intergenic Intergenic 29694 NR_132655 102639736 NR_132655 Gm35978 - predicted gene, 35978 ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-50 chr5 100048133 100048407 + 2.83420869758413 NA intron (NM_001163035, intron 1 of 6) intron (NM_001163035, intron 1 of 6) 8276 NR_027990 67870 Mm.11311 NM_026421 ENSMUSG00000029326 Enoph1 2310057D15Rik|BB183658|C81437 enolase-phosphatase 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-28 chr15 25354018 25354215 + 2.83420869758413 NA Intergenic Intergenic 59648 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-49 chr5 35907876 35908153 + 2.83420869758413 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 14695 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-36 chr2 68223591 68223937 + 2.83420869758413 NA intron (NM_016866, intron 16 of 17) intron (NM_016866, intron 16 of 17) 119092 NM_020283 26877 Mm.226435 NM_020283 ENSMUSG00000034780 B3galt1 beta3Gal-T1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-16 chr11 88483363 88483616 + 2.83420869758413 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) 130716 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-43 chr4 83318180 83318418 + 2.83420869758413 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 5890 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-10 chr13 97237849 97238082 + 2.83420869758413 NA Intergenic Intergenic -3140 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-51 chr5 148546833 148547115 + 2.83420869758413 NA intron (NM_001359199, intron 3 of 6) intron (NM_001359199, intron 3 of 6) 4699 NM_001359201 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-3 chr10 16580081 16580341 + 2.83420869758413 NA Intergenic Intergenic 515571 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-20 chr13 24453156 24453359 + 2.83420869758413 NA intron (NM_001111110, intron 11 of 16) intron (NM_001111110, intron 11 of 16) 38135 NM_001284520 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-48 chr5 5513383 5513601 + 2.83420869758413 NA intron (NM_022890, intron 1 of 3) ID4_|SINE|ID 1297 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-6 chr1 155740617 155740846 + 2.83420869758413 NA intron (NM_010712, intron 1 of 5) intron (NM_010712, intron 1 of 5) 1296 NM_010712 16872 Mm.103624 NM_010712 ENSMUSG00000026468 Lhx4 A330062J17Rik|Gsh-4|Gsh4 LIM homeobox protein 4 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-62 chr9 58132389 58132590 + 2.83420869758413 NA intron (NM_009291, intron 1 of 18) intron (NM_009291, intron 1 of 18) -1586 NM_001162476 20897 Mm.10801 NM_009291 ENSMUSG00000032327 Stra6 AI891933 stimulated by retinoic acid gene 6 protein-coding unique_peak2_0_11_-3.82670253821038_1.67161123161596_2.83420869758413-6 chr12 113157087 113157291 + 2.83420869758413 NA exon (NM_134041, exon 3 of 8) exon (NM_134041, exon 3 of 8) 768 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 Tedc1 4930427A07Rik|AA536649|mFLJ00116 tubulin epsilon and delta complex 1 protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-27 chr15 7493876 7494066 + 2.83420869758413 NA Intergenic Intergenic -95576 NM_001289498 268780 Mm.203208 NM_178748 ENSMUSG00000042961 Egflam 5930412K08|AU040377 EGF-like, fibronectin type III and laminin G domains protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-18 chr12 30020723 30020998 + 2.83420869758413 NA Intergenic Intergenic 82824 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding unique_peak1_12_1_2.43259315402836_2.21629657701418_2.83420869758413-41 chr3 123065092 123065291 + 2.83420869758413 NA Intergenic Intergenic -30204 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak2_110_143_-0.665183637730659_6.83733318257698_2.83135840578541 chr9 102768043 102770199 + 2.83135840578541 NA Intergenic Intergenic 29473 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak2_19_43_-1.40973467566562_4.75456428080449_2.83052996583712-2 chr9 63967500 63968146 + 2.83052996583712 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 54236 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak2_19_43_-1.40973467566562_4.75456428080449_2.83052996583712 chr2 167576339 167576685 + 2.83052996583712 NA Intergenic Intergenic 38317 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_20_43_-1.33984194304467_4.78951064711496_2.83052996583712-2 chrX 105928933 105929382 + 2.83052996583712 NA 5' UTR (NM_009530, exon 1 of 35) 5' UTR (NM_009530, exon 1 of 35) 215 NM_009530 22589 Mm.10141 NM_009530 ENSMUSG00000031229 Atrx 4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX ATRX, chromatin remodeler protein-coding common_peak2_20_43_-1.33984194304467_4.78951064711496_2.83052996583712 chr4 141545377 141545857 + 2.83052996583712 NA promoter-TSS (NR_030695) promoter-TSS (NR_030695) -545 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA unique_peak1_51_17_1.24855819343956_4.79420409816209_2.83052996583711 chr3 146852139 146852908 + 2.83052996583711 NA 5' UTR (NM_001357217, exon 1 of 21) 5' UTR (NM_001357217, exon 1 of 21) 156 NM_001302957 70892 Mm.187793 NM_027594 ENSMUSG00000036745 Ttll7 1110049N09Rik|4921517B04Rik|C630030B20|mTTLL7 tubulin tyrosine ligase-like family, member 7 protein-coding common_peak1_51_17_1.24855819343956_4.79420409816209_2.83052996583711 chr10 84622703 84623159 + 2.83052996583711 NA intron (NM_027423, intron 1 of 27) intron (NM_027423, intron 1 of 27) 494 NM_027423 70428 Mm.335007 NM_027423 ENSMUSG00000034453 Polr3b 2700078H01Rik|A330032P03Rik|C85372|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-12 chr16 33832643 33832839 + 2.82951996911245 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 3076 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-6 chr11 97417600 97418029 + 2.82951996911245 NA Intergenic Intergenic -32346 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-9 chr13 34235233 34235489 + 2.82951996911245 NA intron (NM_001033167, intron 3 of 10) intron (NM_001033167, intron 3 of 10) 72397 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-4 chr10 8747419 8747732 + 2.82951996911245 NA intron (NM_175155, intron 10 of 19) intron (NM_175155, intron 10 of 19) 138495 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding common_peak2_4_20_-2.3285105206606_3.22806216244846_2.82951996911245 chr8 126548121 126548417 + 2.82951996911245 NA Intergenic Intergenic 45167 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-2 chr14 32073024 32073217 + 2.82951996911245 NA Intergenic Intergenic 12166 NR_104305 105638 Mm.2519 NM_172254 ENSMUSG00000021905 Dph3 DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2 diphthamine biosynthesis 3 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-7 chr12 70496000 70496381 + 2.82951996911245 NA intron (NR_037248, intron 2 of 4) intron (NR_037248, intron 2 of 4) 43036 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-14 chr2 152330883 152331240 + 2.82951996911245 NA exon (NM_001083921, exon 2 of 12) exon (NM_001083921, exon 2 of 12) 1364 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding unique_peak2_4_20_-2.3285105206606_3.22806216244846_2.82951996911245 chr12 16847516 16847900 + 2.82951996911245 NA Intergenic Intergenic 36743 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-2 chr1 184853717 184854271 + 2.82951996911245 NA Intergenic Intergenic -8147 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-19 chr6 49638099 49638558 + 2.82951996911245 NA Intergenic Intergenic -184382 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-15 chr2 168606728 168607046 + 2.82951996911245 NA Intergenic Intergenic -5230 NM_001291173 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245 chr1 155095363 155095588 + 2.82951996911245 NA TTS (NM_010500) TTS (NM_010500) 4161 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-5 chr11 69415057 69415332 + 2.82951996911245 NA Intergenic Intergenic -1519 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak2_4_20_-2.3285105206606_3.22806216244846_2.82951996911245-2 chr9 49990316 49990574 + 2.82951996911245 NA Intergenic Intergenic -191052 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-16 chr3 143651862 143652246 + 2.82951996911245 NA Intergenic Intergenic 60089 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-13 chr19 53437706 53437969 + 2.82951996911245 NA Intergenic Intergenic 26959 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-8 chr12 95598215 95598645 + 2.82951996911245 NA Intergenic Intergenic -93796 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-20 chr7 84358654 84358880 + 2.82951996911245 NA intron (NM_007488, intron 2 of 18) intron (NM_007488, intron 2 of 18) 51271 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-17 chr5 114773781 114774084 + 2.82951996911245 NA promoter-TSS (NM_019834) promoter-TSS (NM_019834) -440 NM_001347400 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-18 chr5 145233418 145233880 + 2.82951996911245 NA intron (NM_028298, intron 2 of 3) intron (NM_028298, intron 2 of 3) 1890 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-3 chr1 192661242 192661497 + 2.82951996911245 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 109850 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-10 chr13 97239722 97240075 + 2.82951996911245 NA Intergenic Intergenic -1207 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245 chr1 183920309 183920691 + 2.82951996911245 NA Intergenic Intergenic 113498 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-21 chr8 46497771 46498209 + 2.82951996911245 NA intron (NM_001302163, intron 2 of 20) intron (NM_001302163, intron 2 of 20) 7024 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding unique_peak1_23_4_1.98894755155789_3.31640187066631_2.82951996911245-11 chr15 80065023 80065354 + 2.82951996911245 NA Intergenic Intergenic 13391 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614 chr13 49396273 49396764 + 2.82905316394614 NA Intergenic ORR1F|LTR|ERVL-MaLR -24705 NR_075085 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak2_8_26_-1.84906629434427_3.83035435499133_2.82905316394614 chr18 62477515 62477778 + 2.82905316394614 NA Intergenic Intergenic 66206 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-11 chr7 30322524 30322755 + 2.82905316394614 NA promoter-TSS (NM_001033140) promoter-TSS (NM_001033140) -264 NM_001033140 68332 Mm.6844 NM_001033140 ENSMUSG00000074211 Sdhaf1 0610010E21Rik|AI430885|AW490662|Lyrm8 succinate dehydrogenase complex assembly factor 1 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614 chr1 131126996 131127259 + 2.82905316394614 NA Intergenic Intergenic 11107 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-7 chr2 28130491 28131136 + 2.82905316394614 NA Intergenic Intergenic -45935 NM_010190 14134 Mm.182935 NM_010190 ENSMUSG00000026835 Fcnb Fcn2 ficolin B protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-4 chr18 68244736 68245048 + 2.82905316394614 NA intron (NM_001357444, intron 2 of 3) intron (NM_001357444, intron 2 of 3) 16081 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-6 chr7 144031032 144031509 + 2.82905316394614 NA Intergenic Intergenic 22016 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-2 chr15 13241022 13241493 + 2.82905316394614 NA Intergenic Intergenic -67582 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-5 chr19 16373352 16373763 + 2.82905316394614 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -58553 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-2 chr2 32527977 32528280 + 2.82905316394614 NA Intergenic Intergenic -7231 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-3 chr17 33908421 33909033 + 2.82905316394614 NA promoter-TSS (NM_007829) promoter-TSS (NM_007829) 451 NR_045146 407803 Mm.250393 NR_045146 ENSMUSG00000092564 BC051226 - cDNA sequence BC051226 ncRNA unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-8 chr2 48481178 48481690 + 2.82905316394614 NA Intergenic Intergenic -332675 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-8 chr8 124283987 124284381 + 2.82905316394614 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 52790 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614 chr10 77084017 77084288 + 2.82905316394614 NA intron (NM_001109991, intron 5 of 40) intron (NM_001109991, intron 5 of 40) 29553 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_7_26_-2.01779247837243_3.74599126297725_2.82905316394614 chr1 14462843 14463220 + 2.82905316394614 NA Intergenic Intergenic -152832 NM_010164 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-2 chr10 84394724 84395237 + 2.82905316394614 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 45491 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_30_7_1.67750451912603_3.83875225956301_2.82905316394614 chr19 58454803 58455005 + 2.82905316394614 NA intron (NM_001285457, intron 1 of 9) CpG 494 NM_001285457 14585 Mm.88367 NM_010279 ENSMUSG00000025089 Gfra1 AU042498 glial cell line derived neurotrophic factor family receptor alpha 1 protein-coding common_peak2_7_26_-2.01779247837243_3.74599126297725_2.82905316394614 chr12 81780781 81781058 + 2.82905316394614 NA 5' UTR (NM_177395, exon 1 of 8) 5' UTR (NM_177395, exon 1 of 8) 251 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-5 chr4 119115875 119116602 + 2.82905316394614 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 7493 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-3 chr17 87763617 87764022 + 2.82905316394614 NA intron (NM_199251, intron 1 of 1) intron (NM_199251, intron 1 of 1) 34175 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-9 chrX 145490060 145490328 + 2.82905316394614 NA Intergenic Intergenic -2555 NM_153319 27494 Mm.100068 NM_153319 ENSMUSG00000041688 Amot CAG-2|D0Kist1|Sii6 angiomotin protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-13 chr9 92549085 92549690 + 2.82905316394614 NA intron (NM_011961, intron 1 of 18) intron (NM_011961, intron 1 of 18) -6518 NR_029474 78575 Mm.407669 NR_029474 ENSMUSG00000103622 B430319G15Rik D530025C14Rik RIKEN cDNA B430319G15 gene ncRNA unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-7 chr8 79084054 79084477 + 2.82905316394614 NA intron (NM_001294279, intron 4 of 14) intron (NM_001294279, intron 4 of 14) 55828 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-12 chr8 28148567 28149123 + 2.82905316394614 NA Intergenic Intergenic -63992 NR_033590 666422 Mm.484413 NR_033590 ENSMUSG00000110372 Gm8096 EG666422 3-phosphoglycerate dehydrogenase pseudogene pseudo unique_peak1_30_7_1.67750451912603_3.83875225956301_2.82905316394614-4 chr4 82412283 82412792 + 2.82905316394614 NA intron (NM_001286131, intron 2 of 9) MER5A|DNA|hAT-Charlie 93242 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-9 chr3 81026927 81027520 + 2.82905316394614 NA Intergenic Intergenic -9193 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614 chr15 95838349 95838536 + 2.82905316394614 NA intron (NM_001253813, intron 2 of 20) intron (NM_001253813, intron 2 of 20) -8370 NR_155276 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-10 chr3 122243829 122244316 + 2.82905316394614 NA Intergenic Intergenic -1485 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak1_31_7_1.72298506464455_3.86149253232228_2.82905316394614-6 chr2 27715582 27716225 + 2.82905316394614 NA intron (NM_001290482, intron 1 of 9) intron (NM_001290482, intron 1 of 9) 5320 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_99_44_0.863390786249389_5.92354848945437_2.82877442536968 chr3 40745388 40746392 + 2.82877442536968 NA intron (NM_011020, intron 1 of 18) intron (NM_011020, intron 1 of 18) 277 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak1_73_29_1.01701516587568_5.41539817854636_2.82656563060959 chr14 54572291 54572843 + 2.82656563060959 NA intron (NM_010590, intron 2 of 7) intron (NM_010590, intron 2 of 7) 5094 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_104_47_0.840174114478859_6.00504955796059_2.82121730027659 chr17 86961535 86962277 + 2.82121730027659 NA Intergenic Intergenic -1205 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_67_98_-0.826580742316402_6.21606624892141_2.82014324931347 chr19 8920069 8920958 + 2.82014324931347 NA 5' UTR (NM_024256, exon 1 of 5) 5' UTR (NM_024256, exon 1 of 5) 120 NM_024256 72727 Mm.259 NM_024256 ENSMUSG00000071649 B3gat3 2810405M13Rik beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein-coding common_peak1_67_98_-0.826580742316402_6.21606624892141_2.82014324931347 chr19 8920054 8920860 + 2.82014324931347 NA promoter-TSS (NM_024256) promoter-TSS (NM_024256) 64 NM_024256 72727 Mm.259 NM_024256 ENSMUSG00000071649 B3gat3 2810405M13Rik beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein-coding common_peak2_97_129_-0.696064649235644_6.67433548841063_2.81899688018434 chr10 59896402 59897575 + 2.81899688018434 NA intron (NM_019965, intron 8 of 8) intron (NM_019965, intron 8 of 8) 17397 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_63_94_-0.85392552325964_6.14289284670113_2.81743047750084 chr16 24448107 24449108 + 2.81743047750084 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 516 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_32_58_-1.11557706496408_5.3248545168798_2.81361620033053 chr10 83360325 83360728 + 2.81361620033053 NA intron (NM_026579, intron 1 of 3) CpG 305 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding common_peak2_70_27_1.05726581964913_5.33598783188217_2.81361620033052 chr14 46883259 46883712 + 2.81361620033052 NA intron (NM_001037221, intron 1 of 12) CpG 520 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding common_peak1_70_27_1.05726581964913_5.33598783188217_2.81361620033052 chr2 129186173 129187117 + 2.81361620033052 NA Intergenic Intergenic -5972 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 - expressed sequence AI847159 ncRNA common_peak2_102_134_-0.679228231992604_6.73720148105453_2.81355645469028 chr13 111488589 111489845 + 2.81355645469028 NA intron (NM_028487, intron 1 of 12) CpG 910 NM_028487 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_1017_688_0.25093165335249_9.55382599938054_2.81324488472368 chr18 75367439 75374602 + 2.81324488472368 NA intron (NM_001042660, intron 2 of 3) intron (NM_001042660, intron 2 of 3) 3655 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_250_141_0.523817320016513_7.41165577951294_2.81323973874972 chr19 5447595 5449602 + 2.81323973874972 NA intron (NM_010235, intron 1 of 3) CpG 900 NM_010235 14283 Mm.6215 NM_010235 ENSMUSG00000024912 Fosl1 AW538199|Fra1|fra-1 fos-like antigen 1 protein-coding common_peak1_135_66_0.729631707732191_6.43090504432387_2.81282147323118-2 chr3 131110782 131112388 + 2.81282147323118 NA exon (NM_010703, exon 1 of 12) exon (NM_010703, exon 1 of 12) -1206 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_135_66_0.729631707732191_6.43090504432387_2.81282147323118 chr15 91672646 91674044 + 2.81282147323118 NA exon (NM_025730, exon 1 of 51) exon (NM_025730, exon 1 of 51) 121 NM_025730 66725 Mm.37558 NM_025730 ENSMUSG00000036273 Lrrk2 4921513O20Rik|9330188B09Rik|AW561911|D630001M17Rik|Gm927|cI-46 leucine-rich repeat kinase 2 protein-coding common_peak1_429_264_0.394885940793015_8.24729151984707_2.8125305759826 chr19 5740357 5743469 + 2.8125305759826 NA 5' UTR (NM_008520, exon 2 of 28) 5' UTR (NM_008520, exon 2 of 28) 1009 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak1_90_39_0.898214149568636_5.77103516967168_2.81241087741094 chr4 88412705 88413499 + 2.81241087741094 NA 3' UTR (NM_025760, exon 7 of 7) 3' UTR (NM_025760, exon 7 of 7) 25824 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding common_peak1_91_39_0.913870227335648_5.77886320855519_2.81241087741094-2 chr8 94385646 94386324 + 2.81241087741094 NA promoter-TSS (NM_022331) promoter-TSS (NM_022331) -444 NM_001357205 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_91_39_0.913870227335648_5.77886320855519_2.81241087741094 chr5 24601611 24603015 + 2.81241087741094 NA promoter-TSS (NM_025891) promoter-TSS (NM_025891) -311 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-14 chr19 28673343 28673687 + 2.81226952737395 NA intron (NM_175459, intron 1 of 10) intron (NM_175459, intron 1 of 10) -4709 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-3 chr11 106666082 106666420 + 2.81226952737395 NA intron (NM_001305158, intron 13 of 14) intron (NM_001305158, intron 13 of 14) 49030 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak2_6_24_-2.09804713683631_3.59483262135657_2.81226952737395 chr17 24036493 24036971 + 2.81226952737395 NA Intergenic Intergenic -1511 NM_175440 213171 Mm.133083 NM_175440 ENSMUSG00000050762 Prss27 CAPH2|Mpn|marapsin protease, serine 27 protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-7 chr14 118132285 118132541 + 2.81226952737395 NA intron (NM_029578, intron 1 of 11) intron (NM_029578, intron 1 of 11) 352 NM_029578 76355 Mm.251537 NM_029578 ENSMUSG00000022130 Tgds 2610017J16Rik|2610025M23Rik|AI648925 TDP-glucose 4,6-dehydratase protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-5 chr12 85184173 85184618 + 2.81226952737395 NA Intergenic Intergenic -7082 NM_008827 18654 Mm.4809 NM_008827 ENSMUSG00000004791 Pgf AI854365|PIGF|Plgf placental growth factor protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-2 chr10 64835980 64836362 + 2.81226952737395 NA intron (NM_001164376, intron 14 of 17) intron (NM_001164376, intron 14 of 17) 284196 NR_152621 102632700 NR_152621 ENSMUSG00000100528 Gm28881 - predicted gene 28881 ncRNA common_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395 chr2 27803612 27803873 + 2.81226952737395 NA Intergenic Intergenic -82683 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-13 chr17 93525662 93526144 + 2.81226952737395 NA Intergenic Intergenic 326735 NM_009625 11516 Mm.3407 NM_009625 ENSMUSG00000024256 Adcyap1 PACAP adenylate cyclase activating polypeptide 1 protein-coding unique_peak2_6_24_-2.09804713683631_3.59483262135657_2.81226952737395-5 chrX 13207713 13208092 + 2.81226952737395 NA Intergenic Intergenic 28381 NR_045430 72122 Mm.75434 NR_045429 ENSMUSG00000100714 2010308F09Rik - RIKEN cDNA 2010308F09 gene ncRNA unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-9 chr15 62484912 62485301 + 2.81226952737395 NA Intergenic Intergenic -265655 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-4 chr11 119979892 119980307 + 2.81226952737395 NA intron (NM_001037754, intron 3 of 13) intron (NM_001037754, intron 3 of 13) -34668 NR_037225 100526518 NR_037225 ENSMUSG00000105524 Mir3065 mir-3065|mmu-mir-3065 microRNA 3065 ncRNA unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-8 chr15 35021204 35021606 + 2.81226952737395 NA intron (NM_001357821, intron 7 of 11) intron (NM_001357821, intron 7 of 11) 134401 NM_001357821 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-12 chr16 16911800 16912234 + 2.81226952737395 NA intron (NM_176833, intron 3 of 7) intron (NM_176833, intron 3 of 7) 15548 NM_176833 68606 Mm.230296 NM_176833 ENSMUSG00000026181 Ppm1f 1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015 protein phosphatase 1F (PP2C domain containing) protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-15 chr4 115087624 115088049 + 2.81226952737395 NA promoter-TSS (NM_001164558) promoter-TSS (NM_001164558) -872 NM_001164558 67182 Mm.30181 NM_026018 ENSMUSG00000028716 Pdzk1ip1 0610007F13Rik|2700030M23Rik|AU046042|Map17 PDZK1 interacting protein 1 protein-coding unique_peak2_6_24_-2.09804713683631_3.59483262135657_2.81226952737395-4 chr7 4781666 4781949 + 2.81226952737395 NA intron (NM_001290423, intron 1 of 4) intron (NM_001290423, intron 1 of 4) 1050 NM_001290423 16156 Mm.35814 NM_008350 ENSMUSG00000004371 Il11 IL-11 interleukin 11 protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-10 chr15 74950466 74950690 + 2.81226952737395 NA Intergenic Intergenic -4473 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-17 chr8 12806426 12806752 + 2.81226952737395 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 25330 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA unique_peak2_6_24_-2.09804713683631_3.59483262135657_2.81226952737395-2 chr2 85099308 85099515 + 2.81226952737395 NA Intergenic Intergenic -12950 NR_040504 74687 Mm.66996 NR_040504 ENSMUSG00000086969 4930443O20Rik - RIKEN cDNA 4930443O20 gene ncRNA unique_peak2_6_24_-2.09804713683631_3.59483262135657_2.81226952737395-3 chr4 81060092 81060420 + 2.81226952737395 NA Intergenic Intergenic 149570 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-6 chr14 33328261 33328925 + 2.81226952737395 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 82431 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-16 chr5 76905781 76906094 + 2.81226952737395 NA promoter-TSS (NM_173765) promoter-TSS (NM_173765) -423 NM_173765 231326 Mm.39271 NM_173765 ENSMUSG00000055923 Aasdh A230062G08Rik|A830035E16|Acsf4|U26 aminoadipate-semialdehyde dehydrogenase protein-coding unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395 chr1 10899172 10899563 + 2.81226952737395 NA Intergenic Intergenic -33493 NR_030645 100124448 NR_030645 ENSMUSG00000076948 Mir467e Mirn467e microRNA 467e ncRNA unique_peak1_28_6_1.77461307889291_3.69466146150406_2.81226952737395-11 chr15 102244837 102245315 + 2.81226952737395 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 1424 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding unique_peak1_55_19_1.20271601933132_4.92328610455302_2.81179020749331-2 chr4 150871919 150872751 + 2.81179020749331 NA Intergenic Intergenic 17265 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_55_19_1.20271601933132_4.92328610455302_2.81179020749331 chr17 75204800 75205682 + 2.81179020749331 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 26460 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_88_120_-0.730556010874667_6.55358523183726_2.81157683482021 chr2 181580745 181582012 + 2.81157683482021 NA TTS (NM_001164597) TTS (NM_001164597) 595 NM_026765 68556 Mm.232400 NM_026765 ENSMUSG00000089917 Uckl1 1110007H10Rik|Urkl1 uridine-cytidine kinase 1-like 1 protein-coding common_peak2_116_149_-0.648664291159102_6.90448654491633_2.81048062925623 chr19 57610277 57611492 + 2.81048062925623 NA promoter-TSS (NM_181415) promoter-TSS (NM_181415) -150 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-2 chr1 69242120 69242384 + 2.81016724606745 NA Intergenic Intergenic -134193 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-10 chr8 126971258 126971566 + 2.81016724606745 NA promoter-TSS (NM_172762) promoter-TSS (NM_172762) -333 NM_172762 52202 Mm.28199 NM_172762 ENSMUSG00000033931 Rbm34 4930547K05Rik|6330444B11|D8Ertd233e RNA binding motif protein 34 protein-coding unique_peak2_5_22_-2.19857635046527_3.42427378082438_2.81016724606745 chr12 13091909 13092317 + 2.81016724606745 NA Intergenic Intergenic -150277 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-5 chr15 84883720 84883922 + 2.81016724606745 NA Intergenic Intergenic -27692 NR_030731 271305 Mm.101022 NM_001081166 ENSMUSG00000016624 Phf21b A730032D07Rik PHD finger protein 21B protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-11 chr9 78634338 78634577 + 2.81016724606745 NA intron (NM_153098, intron 2 of 32) intron (NM_153098, intron 2 of 32) 18911 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-8 chr6 97295303 97295763 + 2.81016724606745 NA intron (NM_145148, intron 22 of 23) intron (NM_145148, intron 22 of 23) -42753 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-6 chr17 26716680 26717194 + 2.81016724606745 NA intron (NM_029870, intron 1 of 8) intron (NM_029870, intron 1 of 8) 1287 NM_029870 77128 Mm.275414 NM_029870 ENSMUSG00000048249 Crebrf A930001N09Rik|LRF CREB3 regulatory factor protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-7 chr6 16958426 16958886 + 2.81016724606745 NA Intergenic Intergenic -60215 NM_031198 21426 Mm.36217 NM_031198 ENSMUSG00000029553 Tfec BB107417|Tcfec|bHLHe34 transcription factor EC protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745 chr1 59162451 59162869 + 2.81016724606745 NA TTS (NM_028717) TTS (NM_028717) 729 NM_001164682 227157 Mm.474049 NM_145143 ENSMUSG00000079550 Mpp4 Dlg6 membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-9 chr8 44034006 44034591 + 2.81016724606745 NA Intergenic Intergenic -334807 NM_001079931 384814 Mm.491652 NM_001079931 Gm5347 EG384814 predicted gene 5347 protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-4 chr15 79106599 79106928 + 2.81016724606745 NA Intergenic Intergenic -2220 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding unique_peak1_26_5_1.89463932975225_3.53228216559728_2.81016724606745-3 chr14 79515762 79516134 + 2.81016724606745 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 274 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak2_40_68_-1.03050990960449_5.59326950197593_2.80976127713525 chr15 74678296 74679014 + 2.80976127713525 NA Intergenic Intergenic -6085 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak2_82_34_0.959040603945952_5.60880331891794_2.80976127713525 chr14 45329877 45330377 + 2.80976127713525 NA intron (NM_025959, intron 1 of 13) intron (NM_025959, intron 1 of 13) 303 NM_025959 67089 Mm.18472 NM_025959 ENSMUSG00000021832 Psmc6 2300001E01Rik|AI451058 proteasome (prosome, macropain) 26S subunit, ATPase, 6 protein-coding common_peak2_112_144_-0.649586388354683_6.85511589583759_2.80955524892542 chr9 115309051 115310915 + 2.80955524892542 NA exon (NM_024222, exon 1 of 16) exon (NM_024222, exon 1 of 16) 438 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-4 chr1 161735976 161736270 + 2.80787975886178 NA Intergenic Intergenic 52372 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-46 chr8 88699619 88699873 + 2.80787975886178 NA intron (NM_001128170, intron 1 of 17) intron (NM_001128170, intron 1 of 17) 2718 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-3 chr1 167393417 167393645 + 2.80787975886178 NA intron (NM_025569, intron 1 of 5) intron (NM_025569, intron 1 of 5) 266 NM_025569 66447 Mm.218286 NM_025569 ENSMUSG00000026688 Mgst3 2010012L10Rik|2010306B17Rik|2700004G04Rik|AA516734|GST-III microsomal glutathione S-transferase 3 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-50 chr9 88277986 88278281 + 2.80787975886178 NA Intergenic Intergenic -49476 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-7 chr11 103029079 103029391 + 2.80787975886178 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 692 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-43 chr7 99270815 99271060 + 2.80787975886178 NA intron (NM_001048167, intron 1 of 2) intron (NM_001048167, intron 1 of 2) 2591 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-21 chr15 88863165 88863400 + 2.80787975886178 NA exon (NM_145478, exon 4 of 6) exon (NM_145478, exon 4 of 6) 1088 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-2 chr1 77842847 77843126 + 2.80787975886178 NA Intergenic Intergenic -327898 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-49 chr9 77745423 77745652 + 2.80787975886178 NA Intergenic Intergenic -8998 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-51 chrX 162510052 162510425 + 2.80787975886178 NA intron (NM_178256, intron 11 of 17) intron (NM_178256, intron 11 of 17) 55278 NM_001359104 194590 Mm.442441 NM_178256 ENSMUSG00000040855 Reps2 POB1 RALBP1 associated Eps domain containing protein 2 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-36 chr4 114373323 114373615 + 2.80787975886178 NA Intergenic Intergenic -33255 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-10 chr12 70889999 70890206 + 2.80787975886178 NA exon (NM_028127, exon 10 of 14) exon (NM_028127, exon 10 of 14) -47755 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-17 chr14 103469741 103469954 + 2.80787975886178 NA Intergenic Intergenic -43494 NM_022886 64929 Mm.244003 NM_022886 ENSMUSG00000022123 Scel 9230114I02Rik sciellin protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-10 chr6 119526112 119526500 + 2.80787975886178 NA intron (NM_009525, intron 1 of 4) intron (NM_009525, intron 1 of 4) 18041 NM_009525 22419 Mm.321818 NM_009525 ENSMUSG00000030170 Wnt5b AW545702|Wnt-5b wingless-type MMTV integration site family, member 5B protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-8 chr2 117548461 117548741 + 2.80787975886178 NA Intergenic Intergenic -205724 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-11 chrX 153724688 153724934 + 2.80787975886178 NA intron (NM_027327, intron 1 of 3) intron (NM_027327, intron 1 of 3) 1257 NM_027327 70123 Mm.146408 NM_027327 ENSMUSG00000086316 Nbdy 2210013O21Rik|AI181827|Thp5 negative regulator of P-body association protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-30 chr3 81163304 81163510 + 2.80787975886178 NA intron (NM_001357746, intron 3 of 6) intron (NM_001357746, intron 3 of 6) 126991 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-44 chr8 18700826 18701038 + 2.80787975886178 NA intron (NM_007426, intron 5 of 8) intron (NM_007426, intron 5 of 8) 40630 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-48 chr8 108744167 108744517 + 2.80787975886178 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 29698 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-6 chr11 54923307 54923521 + 2.80787975886178 NA intron (NM_001271456, intron 12 of 18) intron (NM_001271456, intron 12 of 18) 20560 NM_008161 14778 Mm.200916 NM_008161 ENSMUSG00000018339 Gpx3 AA960521|EGPx|GPx|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-19 chr15 58518114 58518305 + 2.80787975886178 NA Intergenic Intergenic 102741 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-9 chr12 70834217 70834441 + 2.80787975886178 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 8815 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-11 chr7 98700455 98700667 + 2.80787975886178 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 2367 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-27 chr2 6594214 6594450 + 2.80787975886178 NA intron (NM_001110232, intron 10 of 15) intron (NM_001110232, intron 10 of 15) 127330 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-20 chr15 69161434 69161646 + 2.80787975886178 NA Intergenic Intergenic -108993 NR_130983 75076 NR_130983 ENSMUSG00000116167 4930504C09Rik - RIKEN cDNA 4930504C09 gene ncRNA unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-2 chr12 10493517 10493747 + 2.80787975886178 NA intron (NR_110487, intron 9 of 11) intron (NR_110487, intron 9 of 11) 47244 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-6 chr16 97889281 97889510 + 2.80787975886178 NA intron (NM_174847, intron 4 of 13) intron (NM_174847, intron 4 of 13) -12104 NR_105929 102465581 NR_105929 ENSMUSG00000105138 Mir6964 mmu-mir-6964 microRNA 6964 ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-23 chr17 73062155 73062570 + 2.80787975886178 NA Intergenic Intergenic -45623 NM_001177968 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-8 chr12 35217241 35217531 + 2.80787975886178 NA Intergenic Intergenic -22489 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-15 chr13 111808549 111808791 + 2.80787975886178 NA exon (NM_011945, exon 1 of 20) exon (NM_011945, exon 1 of 20) 323 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-34 chr4 31975234 31975622 + 2.80787975886178 NA intron (NM_009316, intron 2 of 16) intron (NM_009316, intron 2 of 16) 11321 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-3 chr12 105596839 105597101 + 2.80787975886178 NA Intergenic Intergenic -7121 NM_007539 12061 Mm.377078 NM_007539 ENSMUSG00000041347 Bdkrb1 B1BKR|B1R|BKR1|BRADYB1|Bdkrb bradykinin receptor, beta 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-45 chr8 80827198 80827406 + 2.80787975886178 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 53177 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-12 chr8 45584842 45585201 + 2.80787975886178 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -42730 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-8 chr4 114958400 114958617 + 2.80787975886178 NA Intergenic Intergenic 28720 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-18 chr14 120291235 120291677 + 2.80787975886178 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) -14996 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178 chr1 69685147 69685417 + 2.80787975886178 NA intron (NM_011770, intron 1 of 7) intron (NM_011770, intron 1 of 7) 678 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-4 chr15 63483868 63484075 + 2.80787975886178 NA Intergenic Intergenic -4363 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-14 chr12 112820502 112820808 + 2.80787975886178 NA 3' UTR (NM_001359292, exon 3 of 3) 3' UTR (NM_001359292, exon 3 of 3) 8734 NM_001359292 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-31 chr3 95068030 95068351 + 2.80787975886178 NA exon (NM_008847, exon 8 of 15) exon (NM_008847, exon 8 of 15) -25576 NM_008951 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-7 chr2 15049013 15049359 + 2.80787975886178 NA 5' UTR (NM_001165942, exon 1 of 4) 5' UTR (NM_001165942, exon 1 of 4) 126 NM_001165942 74455 Mm.478923 NM_028950 ENSMUSG00000026707 Nsun6 4933403D21Rik|4933414E04Rik|NOPD1 NOL1/NOP2/Sun domain family member 6 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-13 chr9 97591496 97591730 + 2.80787975886178 NA intron (NM_022319, intron 2 of 17) intron (NM_022319, intron 2 of 17) -221655 NM_030219 78911 Mm.108347 NM_030219 ENSMUSG00000032451 Trim42 4930486B16Rik tripartite motif-containing 42 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-39 chr5 140082938 140083192 + 2.80787975886178 NA intron (NR_152617, intron 15 of 16) intron (NR_152617, intron 15 of 16) 91853 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-47 chr8 105538317 105538517 + 2.80787975886178 NA intron (NM_013477, intron 2 of 7) intron (NM_013477, intron 2 of 7) 19671 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-5 chr12 77853110 77853394 + 2.80787975886178 NA Intergenic Intergenic -373403 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-22 chr16 31589451 31589656 + 2.80787975886178 NA Intergenic Intergenic -28580 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-29 chr3 18127498 18127722 + 2.80787975886178 NA intron (NM_007825, intron 1 of 5) intron (NM_007825, intron 1 of 5) 73285 NM_021560 59058 Mm.149938 NM_021560 ENSMUSG00000025128 Bhlhe22 Beta3|Beta3a|Bhlhb5 basic helix-loop-helix family, member e22 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-13 chr12 100325621 100325939 + 2.80787975886178 NA intron (NM_001033213, intron 18 of 19) intron (NM_001033213, intron 18 of 19) 49171 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-32 chr3 95108498 95108845 + 2.80787975886178 NA Intergenic Intergenic -1741 NM_001293707 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178 chr1 54827427 54827631 + 2.80787975886178 NA intron (NM_001081433, intron 2 of 27) intron (NM_001081433, intron 2 of 27) 98858 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-9 chr5 111200321 111200693 + 2.80787975886178 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -130190 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-3 chr1 89580708 89581011 + 2.80787975886178 NA intron (NM_001037136, intron 1 of 16) CpG 103033 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-37 chr4 118123012 118123438 + 2.80787975886178 NA intron (NM_001285521, intron 1 of 10) intron (NM_001285521, intron 1 of 10) 11721 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-16 chr14 79452114 79452317 + 2.80787975886178 NA exon (NM_001034882, exon 1 of 1) exon (NM_001034882, exon 1 of 1) 380 NM_001034882 432879 Mm.308666 NM_001034882 ENSMUSG00000075502 Kbtbd6 EG432879|Gm5465|Zbtbd6 kelch repeat and BTB (POZ) domain containing 6 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-25 chr19 21651808 21652004 + 2.80787975886178 NA intron (NM_025423, intron 1 of 3) intron (NM_025423, intron 1 of 3) 885 NM_025423 66206 Mm.272430 NM_025423 ENSMUSG00000035171 1110059E24Rik - RIKEN cDNA 1110059E24 gene protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-12 chr12 98258489 98258722 + 2.80787975886178 NA intron (NM_008079, intron 1 of 16) intron (NM_008079, intron 1 of 16) 854 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-5 chr16 34783890 34784131 + 2.80787975886178 NA promoter-TSS (NM_139300) promoter-TSS (NM_139300) -940 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-33 chr3 145691927 145692414 + 2.80787975886178 NA Intergenic Intergenic -42185 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-2 chr1 61750761 61751014 + 2.80787975886178 NA intron (NM_001081050, intron 1 of 22) intron (NM_001081050, intron 1 of 22) 112063 NM_001081050 72823 Mm.35153 NM_001081050 ENSMUSG00000052062 Pard3b 1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-9 chr8 70683982 70684183 + 2.80787975886178 NA Intergenic Intergenic 10851 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-10 chr9 56273308 56273535 + 2.80787975886178 NA intron (NM_172924, intron 3 of 6) intron (NM_172924, intron 3 of 6) -112351 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-5 chr10 17793384 17793774 + 2.80787975886178 NA Intergenic Intergenic -2640 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178-6 chr19 7080142 7080360 + 2.80787975886178 NA intron (NM_134147, intron 3 of 10) intron (NM_134147, intron 3 of 10) 23483 NM_134147 107227 Mm.439977 NM_134147 ENSMUSG00000036278 Macrod1 AI604841|AW743046|D930010J01Rik|Lrp16 MACRO domain containing 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-38 chr4 136468875 136469197 + 2.80787975886178 NA promoter-TSS (NM_024452) promoter-TSS (NM_024452) -725 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-41 chr6 91146639 91147095 + 2.80787975886178 NA Intergenic MIR|SINE|MIR -9948 NM_144919 232232 Mm.206218 NM_144919 ENSMUSG00000034245 Hdac11 - histone deacetylase 11 protein-coding unique_peak2_3_15_-2.25584999663572_2.87207500168214_2.80787975886178 chr1 158712449 158712896 + 2.80787975886178 NA 3' UTR (NM_001085376, exon 22 of 22) 3' UTR (NM_001085376, exon 22 of 22) 207047 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-26 chr19 55748835 55749144 + 2.80787975886178 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 7179 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-28 chr2 91063217 91063473 + 2.80787975886178 NA exon (NM_026721, exon 8 of 10) exon (NM_026721, exon 8 of 10) 6970 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-11 chr12 75852325 75852583 + 2.80787975886178 NA intron (NM_001005510, intron 1 of 115) intron (NM_001005510, intron 1 of 115) 34136 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-4 chr1 183905085 183905342 + 2.80787975886178 NA Intergenic Intergenic 128785 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-40 chr6 50997647 50998043 + 2.80787975886178 NA Intergenic Intergenic 221730 NR_045984 319981 Mm.131454 NR_045984 ENSMUSG00000107667 C530044C16Rik - RIKEN cDNA C530044C16 gene ncRNA unique_peak2_2_15_-2.66795941483502_2.66602029258249_2.80787975886178-7 chr17 35766182 35766466 + 2.80787975886178 NA Intergenic Intergenic -6126 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-24 chr18 65795127 65795371 + 2.80787975886178 NA Intergenic Intergenic -5329 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-35 chr4 41774387 41774605 + 2.80787975886178 NA promoter-TSS (NM_001347065) promoter-TSS (NM_001347065) -320 NM_001048179 20301 Mm.335946 NM_011336 ENSMUSG00000073888 Ccl27a ALP|AW558992|CTACK|CTAK|Ccl27|ESkine|ILC|PESKY|Scya27|Scya27a chemokine (C-C motif) ligand 27A protein-coding unique_peak1_17_3_1.89876622824595_2.94938311412297_2.80787975886178-42 chr6 97829793 97830196 + 2.80787975886178 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) 22936 NM_001113198 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding common_peak1_66_25_1.0811132994993_5.24099636789074_2.80467882841136 chr5 149392078 149392570 + 2.80467882841136 NA Intergenic Intergenic -19425 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_29_55_-1.17682237685847_5.21894373362837_2.80467882841136-3 chr6 4600718 4601305 + 2.80467882841136 NA promoter-TSS (NM_145398) promoter-TSS (NM_145398) -55 NM_145398 213819 Mm.270703 NM_145398 ENSMUSG00000015189 Casd1 Cas1|Cast1|SOAT CAS1 domain containing 1 protein-coding common_peak2_29_55_-1.17682237685847_5.21894373362837_2.80467882841136-2 chr16 86304189 86304876 + 2.80467882841136 NA Intergenic B1_Mus2|SINE|Alu -403407 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak1_66_25_1.0811132994993_5.24099636789074_2.80467882841136 chr15 101367545 101368402 + 2.80467882841136 NA intron (NM_028770, intron 1 of 8) intron (NM_028770, intron 1 of 8) -1379 NR_035462 100316694 NR_035462 ENSMUSG00000088459 Mir1941 mmu-mir-1941 microRNA 1941 ncRNA common_peak2_29_55_-1.17682237685847_5.21894373362837_2.80467882841136 chr10 108432673 108433471 + 2.80467882841136 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 100883 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_59_21_1.16404594698859_5.04145459213159_2.80248000195415-2 chr8 68143702 68144535 + 2.80248000195415 NA Intergenic Intergenic -132410 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding unique_peak1_59_21_1.16404594698859_5.04145459213159_2.80248000195415 chr1 71888150 71888840 + 2.80248000195415 NA non-coding (NR_027658, exon 1 of 3) non-coding (NR_027658, exon 1 of 3) 383 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_59_21_1.16404594698859_5.04145459213159_2.80248000195415 chr2 26021012 26021672 + 2.80248000195415 NA intron (NM_133835, intron 1 of 9) intron (NM_133835, intron 1 of 9) 418 NM_133835 98766 Mm.247824 NM_133835 ENSMUSG00000036352 Ubac1 1110033G07Rik|AA407978|GBDR1|Gdbr1|Kpc2|Ubadc1 ubiquitin associated domain containing 1 protein-coding common_peak1_215_118_0.563619128445727_7.17662732753081_2.80203997711335 chr3 95228393 95229864 + 2.80203997711335 NA promoter-TSS (NM_019914) promoter-TSS (NM_019914) 185 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak2_161_193_-0.553585368632758_7.32312015787075_2.8020058259963 chr15 77848859 77850156 + 2.8020058259963 NA Intergenic RSINE1|SINE|B4 -7332 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_39_11_1.45767946267727_4.31380223205979_2.80071159219767-4 chr8 105604687 105605085 + 2.80071159219767 NA promoter-TSS (NM_001081241) promoter-TSS (NM_001081241) -343 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding unique_peak2_12_33_-1.65486968722198_4.26002799763935_2.80071159219767-3 chr9 87728449 87729114 + 2.80071159219767 NA intron (NM_023814, intron 2 of 7) intron (NM_023814, intron 2 of 7) 2479 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding unique_peak1_39_11_1.45767946267727_4.31380223205979_2.80071159219767-2 chr14 55900372 55900735 + 2.80071159219767 NA promoter-TSS (NM_001082975) promoter-TSS (NM_001082975) -321 NM_001082975 654795 Mm.486218 NM_001082975 ENSMUSG00000022223 Sdr39u1 2310014G06Rik short chain dehydrogenase/reductase family 39U, member 1 protein-coding unique_peak1_39_11_1.45767946267727_4.31380223205979_2.80071159219767-3 chr8 82401599 82401891 + 2.80071159219767 NA intron (NM_001254747, intron 1 of 7) intron (NM_001254747, intron 1 of 7) 841 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_12_33_-1.65486968722198_4.26002799763935_2.80071159219767-2 chr8 128387048 128387536 + 2.80071159219767 NA intron (NM_001358959, intron 2 of 16) intron (NM_001358959, intron 2 of 16) 28051 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_39_11_1.45767946267727_4.31380223205979_2.80071159219767 chr1 73947110 73947533 + 2.80071159219767 NA intron (NM_001289895, intron 19 of 32) intron (NM_001289895, intron 19 of 32) -82855 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA common_peak2_12_33_-1.65486968722198_4.26002799763935_2.80071159219767 chr7 25376835 25377111 + 2.80071159219767 NA intron (NR_073027, intron 1 of 5) intron (NR_073027, intron 1 of 5) 154 NR_073027 654804 Mm.389841 NM_001039540 ENSMUSG00000053714 4732471J01Rik - RIKEN cDNA 4732471J01 gene ncRNA unique_peak2_12_33_-1.65486968722198_4.26002799763935_2.80071159219767 chr10 12821049 12821413 + 2.80071159219767 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 40504 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_39_11_1.45767946267727_4.31380223205979_2.80071159219767-2 chr5 151185653 151185993 + 2.80071159219767 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 4370 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_39_11_1.45767946267727_4.31380223205979_2.80071159219767 chr2 73386888 73387160 + 2.80071159219767 NA promoter-TSS (NM_001190297) promoter-TSS (NM_001190297) -544 NM_001276444 68526 Mm.451014 NM_001080707 ENSMUSG00000041762 Gpr155 1110017O10Rik|DEPDC3|F730029F15Rik|PGR22 G protein-coupled receptor 155 protein-coding common_peak2_27_52_-1.19622136077127_5.12980977417756_2.80059901349926 chr11 5834756 5835132 + 2.80059901349926 NA intron (NM_017401, intron 4 of 10) intron (NM_017401, intron 4 of 10) 3072 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak2_27_52_-1.19622136077127_5.12980977417756_2.80059901349926-2 chr16 4624542 4625020 + 2.80059901349926 NA intron (NM_025571, intron 1 of 4) CpG 165 NM_025571 66449 Mm.354760 NM_025571 ENSMUSG00000014301 Pam16 2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein-coding common_peak1_62_23_1.10840779752568_5.139166399484_2.80059901349926 chr9 111387019 111388212 + 2.80059901349926 NA intron (NM_001164659, intron 18 of 21) intron (NM_001164659, intron 18 of 21) -51466 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak2_16_38_-1.46851638195255_4.55114402788597_2.79998507211557 chr15 85811186 85811671 + 2.79998507211557 NA intron (NM_197998, intron 1 of 4) CpG 269 NM_001164626 72355 Mm.33706 NM_197998 ENSMUSG00000064284 Cdpf1 2210021J22Rik cysteine rich, DPF motif domain containing 1 protein-coding unique_peak1_45_14_1.33596270618774_4.57487194870239_2.79998507211556-2 chr12 81631530 81632196 + 2.79998507211556 NA intron (NM_001033149, intron 1 of 2) CpG 614 NM_001033149 69480 Mm.130002 NM_001033149 ENSMUSG00000042734 Ttc9 - tetratricopeptide repeat domain 9 protein-coding common_peak1_45_14_1.33596270618774_4.57487194870239_2.79998507211556 chr4 137698918 137699569 + 2.79998507211556 NA intron (NR_138594, intron 1 of 1) intron (NR_138594, intron 1 of 1) 7363 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA unique_peak1_45_14_1.33596270618774_4.57487194870239_2.79998507211556-3 chr4 34886455 34887240 + 2.79998507211556 NA Intergenic CpG -3899 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding unique_peak1_45_14_1.33596270618774_4.57487194870239_2.79998507211556 chr1 74033071 74033636 + 2.79998507211556 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 91094 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_45_14_1.33596270618774_4.57487194870239_2.79998507211556 chr14 45388442 45388659 + 2.79998507211556 NA intron (NM_019425, intron 1 of 5) CpG 246 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding unique_peak1_45_14_1.33596270618774_4.57487194870239_2.79998507211556-4 chr7 30321849 30322295 + 2.79998507211556 NA exon (NM_001033140, exon 1 of 1) exon (NM_001033140, exon 1 of 1) 303 NM_001033140 68332 Mm.6844 NM_001033140 ENSMUSG00000074211 Sdhaf1 0610010E21Rik|AI430885|AW490662|Lyrm8 succinate dehydrogenase complex assembly factor 1 protein-coding unique_peak1_45_14_1.33596270618774_4.57487194870239_2.79998507211556-5 chr7 139258722 139259376 + 2.79998507211556 NA intron (NM_001098636, intron 2 of 2) intron (NM_001098636, intron 2 of 2) 10567 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_290_168_0.484511740783103_7.64313530667374_2.79826877011799 chr4 137468821 137471369 + 2.79826877011799 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 1292 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_50_79_-0.931261635323456_5.85629727722563_2.79764007137193 chr15 62334647 62335344 + 2.79764007137193 NA Intergenic Intergenic -115544 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_286_312_-0.424455209331295_8.07779124226697_2.79644682458019 chr19 5799552 5802332 + 2.79644682458019 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 1730 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-14 chr13 15757408 15757796 + 2.79529063155376 NA Intergenic Intergenic 45028 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-48 chr3 144581691 144582048 + 2.79529063155376 NA intron (NM_053102, intron 2 of 4) intron (NM_053102, intron 2 of 4) 11442 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-53 chr4 150241253 150241442 + 2.79529063155376 NA intron (NM_023119, intron 3 of 11) intron (NM_023119, intron 3 of 11) 4023 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-65 chr9 32118372 32118659 + 2.79529063155376 NA intron (NM_001195632, intron 1 of 21) intron (NM_001195632, intron 1 of 21) 2379 NM_001195632 330914 Mm.46683 NM_177379 ENSMUSG00000041444 Arhgap32 3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap Rho GTPase activating protein 32 protein-coding unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-2 chr15 3436694 3436898 + 2.79529063155376 NA intron (NM_001048178, intron 2 of 8) intron (NM_001048178, intron 2 of 8) -133270 NM_001357801 100039139 Mm.455610 NM_001166063 ENSMUSG00000091119 Ccdc152 - coiled-coil domain containing 152 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-33 chr18 60293005 60293340 + 2.79529063155376 NA promoter-TSS (NM_001101475) promoter-TSS (NM_001101475) -208 NM_001101475 240328 Mm.329461 NM_001101475 ENSMUSG00000090942 F830016B08Rik Ifgga4 RIKEN cDNA F830016B08 gene protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-69 chrX 162046459 162046764 + 2.79529063155376 NA intron (NM_001290526, intron 1 of 8) intron (NM_001290526, intron 1 of 8) 112830 NM_001081052 195727 Mm.336313 NM_001081052 ENSMUSG00000059493 Nhs Gm389|Gm48|Nhs1|Xcat NHS actin remodeling regulator protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-20 chr14 123532317 123532571 + 2.79529063155376 NA intron (NM_177393, intron 7 of 43) intron (NM_177393, intron 7 of 43) 94700 NM_177393 338370 Mm.255348 NM_177393 ENSMUSG00000000197 Nalcn A530023G15Rik|AI849508|Vgcnl1 sodium leak channel, non-selective protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-36 chr2 131821821 131822131 + 2.79529063155376 NA non-coding (NR_029381, exon 3 of 3) non-coding (NR_029381, exon 3 of 3) 25680 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-42 chr3 60560780 60561014 + 2.79529063155376 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 59718 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-44 chr3 84729901 84730088 + 2.79529063155376 NA Intergenic Intergenic 63802 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-28 chr17 24645072 24645305 + 2.79529063155376 NA promoter-TSS (NM_023449) promoter-TSS (NM_023449) -231 NM_023449 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-3 chr1 62764227 62764450 + 2.79529063155376 NA intron (NM_001077404, intron 9 of 16) intron (NM_001077404, intron 9 of 16) 30394 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-5 chr7 141614149 141614351 + 2.79529063155376 NA promoter-TSS (NR_040337) promoter-TSS (NR_040337) -503 NR_040337 100036523 Mm.398994 NR_040337 ENSMUSG00000097170 Gm16982 - predicted gene, 16982 ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-15 chr13 34117824 34118097 + 2.79529063155376 NA Intergenic ID4_|SINE|ID -4688 NR_046184 432745 Mm.159104 NR_046184 ENSMUSG00000113591 4930447K03Rik - RIKEN cDNA 4930447K03 gene ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-39 chr2 152349270 152349599 + 2.79529063155376 NA intron (NR_033505, intron 1 of 4) intron (NR_033505, intron 1 of 4) 3765 NR_033505 791417 Mm.451219 NR_033505 ENSMUSG00000068062 Gm14164 - predicted gene 14164 ncRNA unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376 chr13 6255751 6255990 + 2.79529063155376 NA Intergenic Intergenic -292287 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-8 chr10 87884047 87884334 + 2.79529063155376 NA intron (NM_001111274, intron 2 of 4) intron (NM_001111274, intron 2 of 4) 23079 NM_001111276 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-32 chr18 44032242 44032461 + 2.79529063155376 NA TTS (NM_001039218) TTS (NM_001039218) 4482 NM_001039218 433178 Mm.120009 NM_001039218 ENSMUSG00000051050 Spink14 EG433178|Gm5505 serine peptidase inhibitor, Kazal type 14 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-21 chr15 38663729 38663989 + 2.79529063155376 NA intron (NM_025494, intron 1 of 12) intron (NM_025494, intron 1 of 12) 1955 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-63 chr8 88695676 88695866 + 2.79529063155376 NA Intergenic Intergenic -1257 NM_001128170 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-54 chr5 77428414 77428831 + 2.79529063155376 NA Intergenic Intergenic -20577 NM_008048 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-29 chr17 27144423 27144800 + 2.79529063155376 NA 3' UTR (NM_173027, exon 6 of 6) 3' UTR (NM_173027, exon 6 of 6) -10720 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-41 chr3 37779627 37780094 + 2.79529063155376 NA Intergenic Intergenic -55500 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-55 chr5 113155661 113155878 + 2.79529063155376 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 7544 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-58 chr7 89567637 89567872 + 2.79529063155376 NA Intergenic Intergenic -40567 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-38 chr2 142696095 142696347 + 2.79529063155376 NA intron (NM_001355123, intron 23 of 26) intron (NM_001355123, intron 23 of 26) 205243 NM_001081133 16558 Mm.251934 NM_001081133 ENSMUSG00000038844 Kif16b 8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590 kinesin family member 16B protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-50 chr4 63508950 63509157 + 2.79529063155376 NA Intergenic Intergenic -13062 NM_001008791 73750 Mm.300397 NM_028640 ENSMUSG00000039137 Whrn 1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|Ush2d|wi whirlin protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-31 chr17 49796600 49796823 + 2.79529063155376 NA intron (NM_177052, intron 13 of 22) intron (NM_177052, intron 13 of 22) 181539 NM_177052 319991 Mm.441340 NM_177052 ENSMUSG00000023999 Kif6 D130004B10Rik|D130084M03Rik kinesin family member 6 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-19 chr14 76763954 76764247 + 2.79529063155376 NA Intergenic Intergenic 3969 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-40 chr2 155872927 155873298 + 2.79529063155376 NA intron (NM_001355443, intron 7 of 9) intron (NM_001355443, intron 7 of 9) -38258 NM_027788 71405 Mm.260918 NM_027788 ENSMUSG00000074647 Fam83c 5530400B04Rik family with sequence similarity 83, member C protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-9 chr11 33216721 33217036 + 2.79529063155376 NA intron (NR_110973, intron 28 of 28) intron (NR_110973, intron 28 of 28) -13290 NM_019916 27140 Mm.25362 NM_019916 ENSMUSG00000040610 Tlx3 Hox11l2|Rnx|Tlx1l2 T cell leukemia, homeobox 3 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-51 chr4 83317418 83317617 + 2.79529063155376 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 6672 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-66 chr9 45930402 45930645 + 2.79529063155376 NA TTS (NM_001281934) TTS (NM_001281934) 5535 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-5 chr1 151059939 151060134 + 2.79529063155376 NA Intergenic Intergenic -66601 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-22 chr15 61155695 61155894 + 2.79529063155376 NA Intergenic Intergenic -234524 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-12 chr11 120574606 120575051 + 2.79529063155376 NA Intergenic B1_Mur3|SINE|Alu -1575 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-23 chr15 76208422 76208643 + 2.79529063155376 NA promoter-TSS (NM_001164203) promoter-TSS (NM_001164203) 121 NM_201387 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-13 chr12 51952985 51953183 + 2.79529063155376 NA intron (NM_177171, intron 6 of 35) intron (NM_177171, intron 6 of 35) 18237 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-17 chr14 34764662 34764859 + 2.79529063155376 NA Intergenic Intergenic -55376 NM_008166 14803 Mm.121569 NM_008166 ENSMUSG00000041078 Grid1 GluD1|GluRdelta1 glutamate receptor, ionotropic, delta 1 protein-coding unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-7 chr8 23166251 23166546 + 2.79529063155376 NA Intergenic ORR1G|LTR|ERVL-MaLR 13127 NM_029002 74561 Mm.290028 NM_029002 ENSMUSG00000063672 Nkx6-3 9130417I07Rik|Nkx6.3 NK6 homeobox 3 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-37 chr2 132085706 132086019 + 2.79529063155376 NA intron (NM_018824, intron 5 of 15) intron (NM_018824, intron 5 of 15) -55874 NM_175445 215653 Mm.204737 NM_175445 ENSMUSG00000027339 Rassf2 3830431H01Rik|9030412M04Rik|AI852669|AW495050 Ras association (RalGDS/AF-6) domain family member 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-52 chr4 139220605 139220808 + 2.79529063155376 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 26595 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-30 chr17 44262445 44262778 + 2.79529063155376 NA intron (NM_172621, intron 4 of 5) intron (NM_172621, intron 4 of 5) 74039 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg|nmf318 chloride intracellular channel 5 protein-coding unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-8 chr9 67103750 67104047 + 2.79529063155376 NA intron (NR_153957, intron 1 of 2) intron (NR_153957, intron 1 of 2) 1598 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-60 chr8 35421650 35421995 + 2.79529063155376 NA Intergenic Intergenic 46081 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-2 chr1 14774925 14775208 + 2.79529063155376 NA Intergenic Intergenic -19100 NM_010827 17681 Mm.5820 NM_010827 ENSMUSG00000025930 Msc MyoR|bHLHa22 musculin protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-24 chr16 26041178 26041398 + 2.79529063155376 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 64496 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-43 chr3 69169572 69169764 + 2.79529063155376 NA Intergenic Intergenic 38435 NR_126533 381452 Mm.331067 NM_001243000 ENSMUSG00000094763 Gm1647 - predicted gene 1647 ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376 chr1 11088027 11088319 + 2.79529063155376 NA intron (NM_029525, intron 5 of 39) intron (NM_029525, intron 5 of 39) 94708 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-4 chr1 73236193 73236473 + 2.79529063155376 NA Intergenic Intergenic -162635 NR_040605 78718 Mm.244075 NR_040605 ENSMUSG00000101812 D530049I02Rik - RIKEN cDNA D530049I02 gene ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-27 chr16 92997521 92997719 + 2.79529063155376 NA Intergenic Intergenic -171546 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-7 chr10 75674989 75675352 + 2.79529063155376 NA intron (NM_172549, intron 29 of 36) intron (NM_172549, intron 29 of 36) -31162 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-10 chr11 60124055 60124265 + 2.79529063155376 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) -15922 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-64 chr8 120068410 120068615 + 2.79529063155376 NA Intergenic Intergenic 32960 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-3 chr2 33322870 33323080 + 2.79529063155376 NA intron (NM_001290570, intron 3 of 16) intron (NM_001290570, intron 3 of 16) 48519 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-68 chr9 53967351 53967599 + 2.79529063155376 NA intron (NM_177769, intron 1 of 10) intron (NM_177769, intron 1 of 10) 7826 NM_177769 270162 Mm.259791 NM_177769 ENSMUSG00000041986 Elmod1 4831417L10|AI428506|AI834991 ELMO/CED-12 domain containing 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-25 chr16 38091980 38092232 + 2.79529063155376 NA intron (NM_001347232, intron 1 of 11) intron (NM_001347232, intron 1 of 11) -2846 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-49 chr4 56483504 56483736 + 2.79529063155376 NA Intergenic Intergenic 257805 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-59 chr8 31967678 31967990 + 2.79529063155376 NA Intergenic Intergenic -49631 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-18 chr14 69498762 69498969 + 2.79529063155376 NA Intergenic Intergenic 13684 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-11 chr11 116679867 116680065 + 2.79529063155376 NA exon (NM_009180, exon 7 of 9) exon (NM_009180, exon 7 of 9) 5369 NR_028570 100216538 NR_028570 ENSMUSG00000065094 Snord1a snR38 small nucleolar RNA, C/D box 1A snoRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-35 chr2 59440050 59440275 + 2.79529063155376 NA Intergenic Intergenic -44491 NM_029723 76747 Mm.275769 NM_029723 ENSMUSG00000026989 Dapl1 2310032F03Rik|EEDA death associated protein-like 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-67 chr9 47700494 47700825 + 2.79529063155376 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 117549 NR_046048 100038460 Mm.447649 NR_046048 Gm10677 - predicted gene 10677 ncRNA unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-6 chr7 145222994 145223217 + 2.79529063155376 NA intron (NR_132644, intron 24 of 24) intron (NR_132644, intron 24 of 24) -14986 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-62 chr8 72138317 72138646 + 2.79529063155376 NA intron (NM_001001491, intron 1 of 7) intron (NM_001001491, intron 1 of 7) 3189 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-16 chr13 107332898 107333145 + 2.79529063155376 NA Intergenic Intergenic -136801 NR_045083 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-26 chr16 77494746 77495110 + 2.79529063155376 NA intron (NR_015543, intron 3 of 4) intron (NR_015543, intron 3 of 4) -104008 NR_029535 387229 NR_029535 ENSMUSG00000065530 Mir99a Mirn99a|mir-99a|mmu-mir-99a microRNA 99a ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-45 chr3 88629811 88630065 + 2.79529063155376 NA intron (NM_001198913, intron 2 of 21) intron (NM_001198913, intron 2 of 21) 8544 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-56 chr6 148213109 148213324 + 2.79529063155376 NA promoter-TSS (NM_001286560) promoter-TSS (NM_001286560) -842 NM_001286560 67456 Mm.59812 NM_026168 ENSMUSG00000030304 Ergic2 1200009B18Rik|4930572C01Rik|AA408438|Ptx1 ERGIC and golgi 2 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-57 chr7 66381993 66382201 + 2.79529063155376 NA promoter-TSS (NR_106024) promoter-TSS (NR_106024) -373 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-47 chr3 107826653 107826865 + 2.79529063155376 NA Intergenic Intergenic -50471 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-46 chr3 97765838 97766044 + 2.79529063155376 NA intron (NM_001039376, intron 8 of 46) intron (NM_001039376, intron 8 of 46) 2073 NM_178080 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-34 chr19 8975364 8975580 + 2.79529063155376 NA intron (NM_026007, intron 7 of 9) intron (NM_026007, intron 7 of 9) 8431 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-61 chr8 69715498 69715775 + 2.79529063155376 NA intron (NM_001039967, intron 1 of 5) intron (NM_001039967, intron 1 of 5) 1266 NM_001039967 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding unique_peak2_1_13_-3.05614993912008_2.27927995249757_2.79529063155376-4 chr5 4834835 4835053 + 2.79529063155376 NA intron (NM_011074, intron 14 of 14) intron (NM_011074, intron 14 of 14) -76728 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding unique_peak1_15_2_2.14507754349664_2.65750127246948_2.79529063155376-6 chr1 164480442 164480819 + 2.79529063155376 NA Intergenic Intergenic -22275 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_125_60_0.755577981110704_6.30852632811824_2.79364893869913 chr7 81453981 81455416 + 2.79364893869913 NA promoter-TSS (NM_007755) promoter-TSS (NM_007755) 60 NM_001252525 12877 Mm.273122 NM_007755 ENSMUSG00000025586 Cpeb1 AU024112|Cpe-bp1|Cpeb|mCPEB|mCpeb-1 cytoplasmic polyadenylation element binding protein 1 protein-coding common_peak1_209_114_0.572591584682395_7.13178584328557_2.79328158688934 chr4 141301222 141303097 + 2.79328158688934 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 938 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak2_122_155_-0.633607049034356_6.96859869434507_2.79314973425178 chr1 89070447 89072580 + 2.79314973425178 NA intron (NM_133816, intron 1 of 5) intron (NM_133816, intron 1 of 5) 1098 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_78_32_0.973173546916823_5.53098089281687_2.788248839267 chr11 61266546 61267440 + 2.788248839267 NA exon (NM_007437, exon 1 of 10) exon (NM_007437, exon 1 of 10) 193 NM_001331114 11671 Mm.398221 NM_007437 ENSMUSG00000010025 Aldh3a2 AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH aldehyde dehydrogenase family 3, subfamily A2 protein-coding unique_peak1_78_32_0.973173546916823_5.53098089281687_2.788248839267 chr3 126384453 126384985 + 2.788248839267 NA intron (NM_173451, intron 1 of 1) intron (NM_173451, intron 1 of 1) 20867 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding common_peak1_78_32_0.973173546916823_5.53098089281687_2.788248839267-2 chr2 167656278 167657404 + 2.788248839267 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 4703 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak1_101_45_0.860049523933649_5.95358671802384_2.78803811283105 chr11 61562822 61564084 + 2.78803811283105 NA intron (NM_001252189, intron 1 of 8) intron (NM_001252189, intron 1 of 8) 16234 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding common_peak1_120_57_0.770329765848753_6.24314587805195_2.78702301443848 chr13 74208204 74209281 + 2.78702301443848 NA promoter-TSS (NM_177333) promoter-TSS (NM_177333) -42 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding common_peak1_87_37_0.92419290958023_5.7100239682337_2.78521478104011 chr14 121379417 121380156 + 2.78521478104011 NA promoter-TSS (NM_145465) promoter-TSS (NM_145465) -556 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_136_67_0.718752732865441_6.44683920768306_2.78413699413141 chr19 6136901 6137999 + 2.78413699413141 NA intron (NM_019722, intron 3 of 4) intron (NM_019722, intron 3 of 4) 3687 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak2_57_87_-0.884518597260031_6.01717232000728_2.78277503532361 chr12 75979294 75980247 + 2.78277503532361 NA intron (NM_001005510, intron 51 of 115) intron (NM_001005510, intron 51 of 115) 70667 NR_039560 100628610 NR_039560 ENSMUSG00000092922 Mir5101 mmu-mir-5101|mu-mir-5101 microRNA 5101 ncRNA common_peak1_115_54_0.786498328279362_6.17460887766434_2.7827508890492 chr8 22764815 22766028 + 2.7827508890492 NA intron (NM_008872, intron 1 of 13) intron (NM_008872, intron 1 of 13) 7699 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding common_peak1_210_115_0.566905959031065_7.1414339746431_2.77567889733446 chr2 14073669 14075551 + 2.77567889733446 NA promoter-TSS (NR_038162) promoter-TSS (NR_038162) 510 NM_011484 20844 Mm.273174 NM_011484 ENSMUSG00000026718 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein-coding common_peak1_75_30_1.00791216458503_5.45815239267939_2.76923187144077 chr11 78535537 78536207 + 2.76923187144077 NA promoter-TSS (NM_018854) promoter-TSS (NM_018854) 388 NM_001159392 21927 Mm.386774 NM_009395 ENSMUSG00000017615 Tnfaip1 Bacurd2|Edp-1|Edp1|Tnfip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding common_peak1_75_30_1.00791216458503_5.45815239267939_2.76923187144077-2 chrX 73478206 73479573 + 2.76923187144077 NA Intergenic Intergenic -4712 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak1_74_30_0.988938153992888_5.44866538738332_2.76923187144077-2 chr16 4594759 4595497 + 2.76923187144077 NA intron (NM_031184, intron 1 of 6) CpG 415 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_74_30_0.988938153992888_5.44866538738332_2.76923187144077 chr13 27732244 27733560 + 2.76923187144077 NA Intergenic Intergenic -16165 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding common_peak2_48_76_-0.933428397328846_5.80007234203048_2.76761540882188 chr17 75470660 75472374 + 2.76761540882188 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 5979 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_49_16_1.27483602090197_4.72488085170132_2.76493082318285 chr1 36471768 36472313 + 2.76493082318285 NA exon (NM_033570, exon 1 of 7) exon (NM_033570, exon 1 of 7) 443 NM_033570 94220 Mm.422638 NM_033570 ENSMUSG00000037408 Cnnm4 5430430O18Rik|Acdp4 cyclin M4 protein-coding unique_peak1_49_16_1.27483602090197_4.72488085170132_2.76493082318285-3 chr19 42035444 42036354 + 2.76493082318285 NA promoter-TSS (NM_020033) promoter-TSS (NM_020033) -139 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding unique_peak2_18_41_-1.41609898866037_4.68426792844858_2.76493082318285-2 chr18 75660282 75660828 + 2.76493082318285 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 37141 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak2_18_41_-1.41609898866037_4.68426792844858_2.76493082318285-3 chr5 65335050 65335573 + 2.76493082318285 NA intron (NM_011258, intron 1 of 24) intron (NM_011258, intron 1 of 24) 328 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding common_peak2_49_16_1.27483602090197_4.72488085170132_2.76493082318285 chr10 97062354 97062682 + 2.76493082318285 NA Intergenic Intergenic 26750 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA unique_peak1_49_16_1.27483602090197_4.72488085170132_2.76493082318285-2 chr13 34037305 34037935 + 2.76493082318285 NA promoter-TSS (NM_026512) promoter-TSS (NM_026512) -21 NM_026512 68021 Mm.140243 NM_026512 ENSMUSG00000038286 Bphl 2010012D11Rik|5730533B08Rik|AI115341 biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) protein-coding unique_peak2_18_41_-1.41609898866037_4.68426792844858_2.76493082318285 chr16 43654369 43655133 + 2.76493082318285 NA intron (NM_001146325, intron 3 of 3) intron (NM_001146325, intron 3 of 3) 9433 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak2_18_41_-1.41609898866037_4.68426792844858_2.76493082318285-4 chr8 94954797 94955161 + 2.76493082318285 NA Intergenic Intergenic -22130 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_49_16_1.27483602090197_4.72488085170132_2.76493082318285 chr8 35864576 35865229 + 2.76493082318285 NA non-coding (NR_046181, exon 3 of 3) non-coding (NR_046181, exon 3 of 3) 18055 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak1_126_61_0.743443311187041_6.32591796598039_2.76271570765632 chr17 28691361 28692585 + 2.76271570765632 NA promoter-TSS (NM_001357724) promoter-TSS (NM_001357724) -595 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak2_73_104_-0.790339756181925_6.31907563957516_2.7627157076563 chr6 145933932 145935126 + 2.7627157076563 NA intron (NM_010656, intron 1 of 2) intron (NM_010656, intron 1 of 2) 407 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_83_35_0.935554715003824_5.63770235894422_2.75965107077516-2 chr2 157451910 157452601 + 2.75965107077516 NA intron (NM_001025395, intron 2 of 13) MIR|SINE|MIR 27962 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak1_83_35_0.935554715003824_5.63770235894422_2.75965107077516 chr11 73047900 73048820 + 2.75965107077516 NA intron (NM_025818, intron 1 of 12) CpG 493 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding common_peak2_41_69_-1.01674832092559_5.62090885648217_2.75965107077516 chr2 50295962 50296770 + 2.75965107077516 NA promoter-TSS (NR_040361) promoter-TSS (NR_040361) 435 NM_001348200 109129 Mm.29214 NM_133839 ENSMUSG00000026766 Mmadhc 2010311D03Rik|AI314967|CblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding unique_peak2_33_59_-1.09705973827207_5.35836072647249_2.7531582050792 chr2 137721218 137722114 + 2.7531582050792 NA Intergenic Intergenic -534918 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_33_59_-1.09705973827207_5.35836072647249_2.7531582050792 chr15 88818775 88819378 + 2.7531582050792 NA promoter-TSS (NM_029720) promoter-TSS (NM_029720) 242 NM_001142357 223774 Mm.41512 NM_145477 ENSMUSG00000035845 Alg12 ECM39 asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase) protein-coding common_peak1_71_28_1.02667527397189_5.37131863211352_2.7531582050792 chr7 116285884 116286701 + 2.7531582050792 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 22084 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_71_28_1.02667527397189_5.37131863211352_2.7531582050792 chr9 80215925 80216778 + 2.7531582050792 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 51317 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak2_33_59_-1.09705973827207_5.35836072647249_2.7531582050792-2 chr6 125483926 125484509 + 2.7531582050792 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 10543 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051-3 chr19 21784700 21785108 + 2.75133420124051 NA intron (NM_031997, intron 2 of 24) intron (NM_031997, intron 2 of 24) 6564 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051-2 chr17 56033735 56034131 + 2.75133420124051 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 2704 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051-5 chr5 151165964 151166413 + 2.75133420124051 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 24005 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051 chr18 65670407 65670836 + 2.75133420124051 NA intron (NM_001361052, intron 6 of 8) intron (NM_001361052, intron 6 of 8) -27647 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_37_10_1.50973183590785_4.21429753659122_2.75133420124051 chr11 62220590 62221181 + 2.75133420124051 NA 3' UTR (NM_001281818, exon 15 of 15) 3' UTR (NM_001281818, exon 15 of 15) -28099 NM_007413 11541 Mm.40740 NM_007413 ENSMUSG00000018500 Adora2b A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384 adenosine A2b receptor protein-coding unique_peak1_37_10_1.50973183590785_4.21429753659122_2.75133420124051-2 chr17 32965667 32966305 + 2.75133420124051 NA promoter-TSS (NR_033585) promoter-TSS (NR_033585) 155 NM_153063 224691 Mm.328953 NM_153063 ENSMUSG00000053600 Zfp472 KRIM-1|Krim-1A|Krim-1B|Krim1 zinc finger protein 472 protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051-4 chr19 57195164 57195661 + 2.75133420124051 NA intron (NM_178688, intron 1 of 24) MIRc|SINE|MIR 2219 NM_001103177 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_37_10_1.50973183590785_4.21429753659122_2.75133420124051 chr6 50391653 50392206 + 2.75133420124051 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -9092 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051 chr14 70116903 70117494 + 2.75133420124051 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 17105 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051-6 chr6 97299596 97300177 + 2.75133420124051 NA intron (NM_145148, intron 20 of 23) B1_Mus1|SINE|Alu -47106 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_37_10_1.50973183590785_4.21429753659122_2.75133420124051-4 chr6 85366229 85366700 + 2.75133420124051 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) 8170 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding unique_peak1_36_10_1.47152912242014_4.19519617984737_2.75133420124051-7 chr8 25329752 25330099 + 2.75133420124051 NA Intergenic Intergenic -23655 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA unique_peak1_37_10_1.50973183590785_4.21429753659122_2.75133420124051-3 chr17 46553102 46553608 + 2.75133420124051 NA TTS (NR_105942) TTS (NR_105942) 534 NR_105942 102466778 NR_105942 ENSMUSG00000106514 Mir6976 mmu-mir-6976 microRNA 6976 ncRNA common_peak2_197_227_-0.499098386686016_7.58334082082173_2.75079440670302 chr8 119812192 119813404 + 2.75079440670302 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 27781 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_55_84_-0.884746821919022_5.96701752517819_2.74861391864322 chr7 144021274 144022777 + 2.74861391864322 NA Intergenic Intergenic 12771 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_102_46_0.842998513380589_5.97608810836793_2.74861391864322 chr15 31343988 31344748 + 2.74861391864322 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 23391 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak2_62_92_-0.845788512861197_6.11626455467743_2.74580449436197-2 chr5 135778665 135779210 + 2.74580449436197 NA promoter-TSS (NM_001289554) promoter-TSS (NM_001289554) 288 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak2_62_92_-0.845788512861197_6.11626455467743_2.74580449436197 chr15 39047854 39048643 + 2.74580449436197 NA Intergenic Intergenic -28684 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak1_112_52_0.802402247097053_6.12912157811173_2.74580449436195 chr11 51967109 51968683 + 2.74580449436195 NA exon (NM_029976, exon 1 of 3) exon (NM_029976, exon 1 of 3) 265 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_107_49_0.82163568155219_6.05467403055082_2.7455047718137 chr19 7568560 7569681 + 2.7455047718137 NA intron (NM_001362425, intron 2 of 4) intron (NM_001362425, intron 2 of 4) 11635 NM_001362425 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 AdPLA|C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak1_110_142_-0.655129973066736_6.83230635024502_2.7448009899228 chr7 74553349 74555179 + 2.7448009899228 NA intron (NM_001038643, intron 1 of 10) CpG 516 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_143_72_0.687776730646199_6.53371292420312_2.74356159595706 chr8 69394999 69396014 + 2.74356159595706 NA promoter-TSS (NR_038043) promoter-TSS (NR_038043) 38 NR_038044 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|Gm10311 predicted gene 10033 ncRNA common_peak2_87_118_-0.722697340284128_6.53346909316588_2.74356159595703 chr3 103790205 103791111 + 2.74356159595703 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 617 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding unique_peak1_53_18_1.22461933745657_4.86023718217187_2.74342783519083 chr10 21996045 21996846 + 2.74342783519083 NA intron (NM_011361, intron 6 of 11) intron (NM_011361, intron 6 of 11) 1779 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak2_31_56_-1.10990494952019_5.27793753940465_2.74059030423418 chr11 69095476 69096265 + 2.74059030423418 NA Intergenic Intergenic -3079 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak2_67_26_1.04788837559974_5.27883168996334_2.74059030423418 chr3 145684327 145684595 + 2.74059030423418 NA Intergenic Intergenic -34476 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_15_36_-1.47941332141115_4.46974670492337_2.74004546941311 chr3 37846476 37846929 + 2.74004546941311 NA Intergenic Intergenic -52111 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_43_13_1.37182048053946_4.49326516232733_2.74004546941311 chr6 115890570 115891317 + 2.74004546941311 NA intron (NM_001167763, intron 12 of 28) intron (NM_001167763, intron 12 of 28) 37415 NM_031177 81896 Mm.333335 NM_031177 ENSMUSG00000030323 Ift122 C86139|Wdr10|sopb intraflagellar transport 122 protein-coding common_peak2_88_38_0.902905007537679_5.73685472263109_2.73885432927896 chr3 79286351 79287011 + 2.73885432927896 NA Intergenic CpG -58695 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding common_peak1_88_38_0.902905007537679_5.73685472263109_2.73885432927896 chr1 56973234 56974160 + 2.73885432927896 NA non-coding (NR_024325, exon 1 of 1) non-coding (NR_024325, exon 1 of 1) 2228 NR_024326 329160 Mm.419039 NR_024325 ENSMUSG00000087022 9130024F11Rik B530002L08|EG329160 RIKEN cDNA 9130024F11 gene ncRNA common_peak1_212_241_-0.480461872913652_7.67863230081777_2.737390078325 chr9 102777840 102779507 + 2.737390078325 NA Intergenic Intergenic 39025 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_39_66_-1.02344722705934_5.5543655769281_2.73597506297428 chr8 25016369 25016766 + 2.73597506297428 NA promoter-TSS (NM_027194) promoter-TSS (NM_027194) 355 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak2_79_33_0.948124142574847_5.56152491253776_2.73597506297428 chr17 26621400 26621948 + 2.73597506297428 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) -54722 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_79_33_0.948124142574847_5.56152491253776_2.73597506297428 chr11 75398199 75399333 + 2.73597506297428 NA intron (NM_001102611, intron 5 of 10) intron (NM_001102611, intron 5 of 10) 23857 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_150_76_0.678811363562138_6.60619222247597_2.73439864765071 chr8 119427368 119428457 + 2.73439864765071 NA Intergenic Intergenic -9250 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_92_123_-0.702911168606638_6.60274072608356_2.73439864765068 chr16 24494435 24495820 + 2.73439864765068 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -34187 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_127_62_0.731595181998147_6.34307751449899_2.73254974113764 chr6 37429514 37431154 + 2.73254974113764 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 11814 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_63_24_1.07207389529658_5.17989313742302_2.7322447134298 chr11 69413981 69414723 + 2.7322447134298 NA promoter-TSS (NM_001017426) promoter-TSS (NM_001017426) -677 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_64_24_1.09428390386102_5.19099814170524_2.7322447134298 chr12 76509180 76509800 + 2.7322447134298 NA Intergenic Intergenic 23722 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak1_63_24_1.07207389529658_5.17989313742302_2.7322447134298-2 chr15 102105737 102106490 + 2.7322447134298 NA intron (NM_001355636, intron 3 of 28) intron (NM_001355636, intron 3 of 28) 3179 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_28_53_-1.17291950121296_5.16842775155699_2.7322447134298 chr13 23761732 23762096 + 2.7322447134298 NA promoter-TSS (NM_178192) promoter-TSS (NM_178192) 472 NM_013550 360198 Mm.221301 NM_013550 ENSMUSG00000069265 Hist1h3a - histone cluster 1, H3a protein-coding unique_peak1_64_24_1.09428390386102_5.19099814170524_2.7322447134298 chr8 36155620 36156080 + 2.7322447134298 NA promoter-TSS (NR_151736) promoter-TSS (NR_151736) -160 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak1_63_24_1.07207389529658_5.17989313742302_2.7322447134298 chr14 61681548 61682313 + 2.7322447134298 NA intron (NR_028264, intron 1 of 6) CpG 443 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA common_peak1_56_20_1.15768163399384_4.97115823977568_2.73222716045371 chr11 69260509 69261164 + 2.73222716045371 NA Intergenic Intergenic -23814 NM_008192 14919 Mm.291816 NM_008192 ENSMUSG00000020890 Gucy2e GC-E|GC1|ROS-GC1 guanylate cyclase 2e protein-coding unique_peak1_56_20_1.15768163399384_4.97115823977568_2.73222716045371 chr9 71437421 71438267 + 2.73222716045371 NA Intergenic Intergenic 47114 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak2_23_47_-1.27408685427591_4.9479190735832_2.7322271604537 chr14 43531008 43531854 + 2.7322271604537 NA Intergenic Intergenic 76582 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding unique_peak2_23_47_-1.27408685427591_4.9479190735832_2.7322271604537-2 chr4 11737744 11738374 + 2.7322271604537 NA Intergenic Intergenic -20098 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_185_216_-0.517321070237488_7.50289069732574_2.73030674436121 chr8 8659130 8661125 + 2.73030674436121 NA intron (NM_010111, intron 1 of 4) CpG 646 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_60_22_1.12359411324586_5.08535901267994_2.72904913530878-2 chr9 32720927 32721947 + 2.72904913530878 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 25395 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_60_22_1.12359411324586_5.08535901267994_2.72904913530878 chr14 46965512 46966378 + 2.72904913530878 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -11017 NR_105813 102465206 NR_105813 ENSMUSG00000099036 Mir378c Gm27930|mmu-mir-378c microRNA 378c ncRNA common_peak1_139_69_0.707963016454349_6.48326452517214_2.72871009473243 chr3 36151152 36151959 + 2.72871009473243 NA intron (NM_001101478, intron 1 of 3) intron (NM_001101478, intron 1 of 3) 475 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding common_peak1_138_69_0.69769403443812_6.47813003416403_2.72871009473243 chr11 96341437 96343059 + 2.72871009473243 NA TTS (NR_155303) TTS (NR_155303) -1521 NM_010458 15410 Mm.342481 NM_010458 ENSMUSG00000048763 Hoxb3 Hox-2.7 homeobox B3 protein-coding common_peak1_250_142_0.513693102742806_7.41671788814979_2.72657737037808 chr6 29431790 29434571 + 2.72657737037808 NA promoter-TSS (NM_001311074) promoter-TSS (NM_001311074) 27 NM_001081185 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding common_peak2_102_133_-0.668501825399545_6.731838277758_2.72450508743743-2 chr17 10317546 10318949 + 2.72450508743743 NA intron (NM_021881, intron 1 of 6) CpG 1114 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak2_102_133_-0.668501825399545_6.731838277758_2.72450508743743 chr11 85234289 85235061 + 2.72450508743743 NA promoter-TSS (NR_028329) promoter-TSS (NR_028329) 445 NM_025825 66884 Mm.271997 NM_025825 ENSMUSG00000018481 Appbp2 1300003O07Rik|AI465480|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding common_peak1_49_77_-0.92310335670994_5.82385054050728_2.7244165856812 chr1 97660751 97661631 + 2.7244165856812 NA 5' UTR (NM_001355072, exon 1 of 3) 5' UTR (NM_001355072, exon 1 of 3) 485 NM_001355074 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak2_132_164_-0.602554689699783_7.06504486939592_2.72369552515485 chr19 16132791 16133848 + 2.72369552515485 NA 5' UTR (NM_008139, exon 1 of 7) 5' UTR (NM_008139, exon 1 of 7) 488 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak1_174_92_0.617744121045163_6.84803087163061_2.72366481613647 chr12 31271743 31273703 + 2.72366481613647 NA intron (NM_008482, intron 4 of 32) intron (NM_008482, intron 4 of 32) 7429 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak2_106_138_-0.666775035694349_6.78555355487633_2.72309084099658 chr11 79253363 79254622 + 2.72309084099658 NA intron (NM_019653, intron 1 of 8) intron (NM_019653, intron 1 of 8) 703 NM_019653 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_289_169_0.471069024846956_7.64492544856118_2.71897961829168 chr3 89277188 89280061 + 2.71897961829168 NA intron (NM_001162425, intron 1 of 4) intron (NM_001162425, intron 1 of 4) 1021 NM_010107 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak1_118_56_0.771544913172597_6.21866247075104_2.71621815333348 chr19 8757150 8758053 + 2.71621815333348 NA promoter-TSS (NR_132423) promoter-TSS (NR_132423) 484 NM_001276704 53319 Mm.7271 NM_016813 ENSMUSG00000010097 Nxf1 Mex67|Mvb1|Tap nuclear RNA export factor 1 protein-coding common_peak1_52_81_-0.911781949348224_5.90166102994397_2.71523212221742 chr11 87748912 87749556 + 2.71523212221742 NA Intergenic Intergenic -7630 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA common_peak1_52_81_-0.911781949348224_5.90166102994397_2.71523212221742-2 chr3 79978841 79979688 + 2.71523212221742 NA Intergenic Intergenic 93334 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_139_170_-0.580606481486583_7.12754927414261_2.71460987754034 chr8 36727900 36729788 + 2.71460987754034 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 4210 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_36_63_-1.06903925894256_5.46548037052872_2.71449847414465 chr9 99645176 99646084 + 2.71449847414465 NA intron (NM_001311142, intron 5 of 15) intron (NM_001311142, intron 5 of 15) 16052 NM_001311142 72507 Mm.221455 NM_028258 ENSMUSG00000037784 Dzip1l 2610524A10Rik|AI663976 DAZ interacting protein 1-like protein-coding common_peak1_76_31_0.980834452171189_5.49041722608559_2.71449847414464 chr12 99393144 99393816 + 2.71449847414464 NA intron (NM_183186, intron 1 of 5) intron (NM_183186, intron 1 of 5) 56594 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak1_76_31_0.980834452171189_5.49041722608559_2.71449847414464 chr3 152121459 152122501 + 2.71449847414464 NA intron (NM_016867, intron 3 of 5) intron (NM_016867, intron 3 of 5) 43920 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak1_258_148_0.499341311022923_7.46883917597362_2.71422334568357 chr6 91207904 91209808 + 2.71422334568357 NA Intergenic Intergenic -3908 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_84_36_0.912979410888136_5.66594307107302_2.71154064660069 chr14 45476763 45477765 + 2.71154064660069 NA intron (NM_001360525, intron 4 of 15) intron (NM_001360525, intron 4 of 15) 52801 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_113_53_0.788056575035888_6.14891578968141_2.71142772243524 chr10 72632900 72634648 + 2.71142772243524 NA Intergenic Intergenic -21072 NM_025635 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak2_64_93_-0.81644875804189_6.14636447265669_2.71142772243521 chr1 186581353 186582579 + 2.71142772243521 NA Intergenic Intergenic -23285 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_103_47_0.826465714587468_5.99819535801489_2.71043851283094 chr15 74954215 74954957 + 2.71043851283094 NA promoter-TSS (NM_001164036) promoter-TSS (NM_001164036) -465 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_108_50_0.806269543156951_6.07556011354997_2.70935296583631-2 chr2 164745248 164746304 + 2.70935296583631 NA promoter-TSS (NM_133763) promoter-TSS (NM_133763) -239 NM_133763 76233 Mm.440009 NM_133763 ENSMUSG00000017299 Dnttip1 6430706C13Rik deoxynucleotidyltransferase, terminal, interacting protein 1 protein-coding common_peak1_108_50_0.806269543156951_6.07556011354997_2.70935296583631 chr2 120129006 120130035 + 2.70935296583631 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 25055 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_108_50_0.806269543156951_6.07556011354997_2.70935296583631-3 chr3 98043529 98044244 + 2.70935296583631 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 30348 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-11 chr14 23046281 23046469 + 2.70926996097583 NA intron (NR_033550, intron 2 of 3) intron (NR_033550, intron 2 of 3) 48196 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-9 chr11 118369261 118369485 + 2.70926996097583 NA Intergenic G-rich|Low_complexity|Low_complexity -13962 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-28 chr2 145780678 145780903 + 2.70926996097583 NA Intergenic Intergenic -5326 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-3 chr10 18989863 18990060 + 2.70926996097583 NA Intergenic Intergenic 22002 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-38 chr5 115856894 115857117 + 2.70926996097583 NA intron (NM_007708, intron 2 of 46) intron (NM_007708, intron 2 of 46) 11349 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-4 chr10 37483138 37483327 + 2.70926996097583 NA Intergenic Intergenic -344306 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-30 chr3 104092982 104093206 + 2.70926996097583 NA intron (NM_133853, intron 3 of 21) intron (NM_133853, intron 3 of 21) -124778 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-19 chr18 60912213 60912435 + 2.70926996097583 NA promoter-TSS (NM_001038499) promoter-TSS (NM_001038499) 84 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-40 chr7 145311959 145312170 + 2.70926996097583 NA Intergenic RSINE1|SINE|B4 -2771 NM_203490 211578 Mm.370299 NM_203490 ENSMUSG00000051207 Mrgprd Gm499|Mgrd|MrgD|TGR7 MAS-related GPR, member D protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-35 chr5 36985786 36986007 + 2.70926996097583 NA intron (NM_011716, intron 1 of 7) intron (NM_011716, intron 1 of 7) 3086 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-16 chr17 83866876 83867082 + 2.70926996097583 NA Intergenic Intergenic -12561 NR_155491 320021 Mm.379475 NR_155490 C430042M11Rik - RIKEN cDNA C430042M11 gene ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-20 chr2 8741536 8741836 + 2.70926996097583 NA Intergenic Intergenic -447829 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-13 chr15 94732739 94732939 + 2.70926996097583 NA intron (NM_178789, intron 3 of 7) intron (NM_178789, intron 3 of 7) 103654 NM_178789 320709 Mm.74873 NM_178789 ENSMUSG00000063296 Tmem117 B930062P21Rik transmembrane protein 117 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-7 chr11 54979474 54979705 + 2.70926996097583 NA intron (NR_138556, intron 24 of 24) intron (NR_138556, intron 24 of 24) -16649 NM_001271455 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-22 chr2 74573970 74574189 + 2.70926996097583 NA intron (NM_001110209, intron 1 of 13) intron (NM_001110209, intron 1 of 13) 4869 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-2 chr1 87434094 87434313 + 2.70926996097583 NA intron (NM_146112, intron 22 of 28) intron (NM_146112, intron 22 of 28) -35998 NM_028473 73234 Mm.7310 NM_028473 ENSMUSG00000026258 3110079O15Rik Snorc RIKEN cDNA 3110079O15 gene protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-10 chr12 24897141 24897352 + 2.70926996097583 NA intron (NM_001083341, intron 3 of 11) intron (NM_001083341, intron 3 of 11) 65647 NM_001083341 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-26 chr2 137101699 137101886 + 2.70926996097583 NA exon (NM_013822, exon 4 of 26) exon (NM_013822, exon 4 of 26) 14728 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-31 chr3 122347477 122347672 + 2.70926996097583 NA Intergenic Intergenic -53871 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-43 chrX 160136646 160136893 + 2.70926996097583 NA intron (NM_008810, intron 1 of 10) intron (NM_008810, intron 1 of 10) 1661 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-32 chr4 32483303 32483519 + 2.70926996097583 NA intron (NM_001109661, intron 1 of 4) intron (NM_001109661, intron 1 of 4) 65976 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-37 chr5 113090169 113090394 + 2.70926996097583 NA 3' UTR (NM_001347397, exon 8 of 8) 3' UTR (NM_001347397, exon 8 of 8) -8697 NM_001359009 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-33 chr4 55025176 55025421 + 2.70926996097583 NA intron (NM_172867, intron 7 of 12) intron (NM_172867, intron 7 of 12) 77353 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-18 chr18 42055026 42055275 + 2.70926996097583 NA intron (NM_172966, intron 1 of 7) intron (NM_172966, intron 1 of 7) 1440 NM_001146299 269016 Mm.45472 NM_172966 ENSMUSG00000057719 Sh3rf2 2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158 SH3 domain containing ring finger 2 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-24 chr2 125216493 125216700 + 2.70926996097583 NA intron (NM_001079690, intron 22 of 27) intron (NM_001079690, intron 22 of 27) -30652 NM_001159646 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-34 chr4 56923149 56923415 + 2.70926996097583 NA intron (NM_175518, intron 6 of 17) intron (NM_175518, intron 6 of 17) 24147 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-41 chr9 66999813 67000040 + 2.70926996097583 NA Intergenic Intergenic -24442 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-15 chr17 54166151 54166346 + 2.70926996097583 NA Intergenic Intergenic 132786 NM_022025 63993 Mm.155241 NM_022025 ENSMUSG00000023945 Slc5a7 CHT1 solute carrier family 5 (choline transporter), member 7 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-25 chr2 131931864 131932086 + 2.70926996097583 NA intron (NM_001278256, intron 3 of 3) intron (NM_001278256, intron 3 of 3) -18886 NM_001278257 26434 Mm.180750 NM_023043 ENSMUSG00000027338 Prnd AI450264|Dpl|PrPLP|doppel prion like protein doppel protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-29 chr3 65541605 65541862 + 2.70926996097583 NA intron (NM_178892, intron 2 of 5) intron (NM_178892, intron 2 of 5) -12319 NR_027955 71004 Mm.475465 NM_001033527 ENSMUSG00000074580 4931440P22Rik - RIKEN cDNA 4931440P22 gene ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-12 chr14 70059113 70059317 + 2.70926996097583 NA intron (NM_028560, intron 6 of 6) intron (NM_028560, intron 6 of 6) -18230 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-8 chr11 94448244 94448452 + 2.70926996097583 NA intron (NM_009783, intron 9 of 35) intron (NM_009783, intron 9 of 35) 25850 NM_001177888 12291 Mm.29585 NM_009783 ENSMUSG00000020866 Cacna1g Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123 calcium channel, voltage-dependent, T type, alpha 1G subunit protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-39 chr6 86704329 86704551 + 2.70926996097583 NA intron (NM_011818, intron 11 of 13) intron (NM_011818, intron 11 of 13) -19949 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583 chr1 36077480 36077687 + 2.70926996097583 NA intron (NM_015818, intron 1 of 1) intron (NM_015818, intron 1 of 1) 9183 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-17 chr18 36426378 36426667 + 2.70926996097583 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 27973 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-36 chr5 50028428 50028659 + 2.70926996097583 NA intron (NM_133911, intron 1 of 18) intron (NM_133911, intron 1 of 18) 30453 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-21 chr2 35715695 35715921 + 2.70926996097583 NA intron (NM_001001602, intron 7 of 13) intron (NM_001001602, intron 7 of 13) 19076 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-23 chr2 118062362 118062574 + 2.70926996097583 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 48734 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-6 chr11 50214619 50214814 + 2.70926996097583 NA Intergenic Intergenic -3896 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-14 chr16 76454790 76455009 + 2.70926996097583 NA Intergenic Intergenic -81072 NM_001358238 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-27 chr2 137722313 137722521 + 2.70926996097583 NA Intergenic (TTC)n|Simple_repeat|Simple_repeat -534167 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-5 chr11 35929618 35929857 + 2.70926996097583 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 50352 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_9_0_3.05675192254492_1.52837596127246_2.70926996097583-42 chr9 108338548 108338754 + 2.70926996097583 NA promoter-TSS (NM_001329528) promoter-TSS (NM_001329528) -429 NM_001329528 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding unique_peak1_34_9_1.52942789765844_4.08664204371658_2.70611768348013-4 chr9 62122957 62123458 + 2.70611768348013 NA promoter-TSS (NR_039595) promoter-TSS (NR_039595) -613 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak1_34_9_1.52942789765844_4.08664204371658_2.70611768348013-2 chr18 61106399 61106765 + 2.70611768348013 NA intron (NM_001037859, intron 2 of 21) intron (NM_001037859, intron 2 of 21) 1010 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding unique_peak1_34_9_1.52942789765844_4.08664204371658_2.70611768348013-3 chr6 148830965 148831320 + 2.70611768348013 NA intron (NM_001081113, intron 1 of 24) GA-rich|Low_complexity|Low_complexity 325 NM_001081113 320727 Mm.260105 NM_001081113 ENSMUSG00000040029 Ipo8 6230418K12Rik|Abcc10|C130009K11Rik|MRP7|OM-1|Om1|Ranbp8 importin 8 protein-coding common_peak1_34_9_1.52942789765844_4.08664204371658_2.70611768348013 chr10 17037629 17037960 + 2.70611768348013 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 57988 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_10_29_-1.71360523386497_4.05008797867603_2.70611768348013 chr5 100664199 100664713 + 2.70611768348013 NA intron (NM_027978, intron 2 of 6) intron (NM_027978, intron 2 of 6) 9800 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding unique_peak1_34_9_1.52942789765844_4.08664204371658_2.70611768348013 chr1 44118338 44118703 + 2.70611768348013 NA promoter-TSS (NM_001357046) promoter-TSS (NM_001357046) 253 NM_023645 72050 Mm.281714 NM_023645 ENSMUSG00000026047 Kdelc1 1810049A15Rik|5730416C13Rik|EP58|Kdel1 KDEL (Lys-Asp-Glu-Leu) containing 1 protein-coding common_peak2_175_93_0.610476591772935_6.85982714756411_2.70289404086483 chr3 107763863 107765424 + 2.70289404086483 NA Intergenic Intergenic -4174 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_17_39_-1.42316186664141_4.61034716156666_2.70027529094734 chr7 141562328 141562577 + 2.70027529094734 NA intron (NM_001357068, intron 1 of 21) CpG 272 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_17_39_-1.42316186664141_4.61034716156666_2.70027529094734 chr19 53395400 53395784 + 2.70027529094734 NA Intergenic Intergenic -4958 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak1_46_15_1.27366130330205_4.63683065165103_2.70027529094734 chr14 74947102 74947738 + 2.70027529094734 NA exon (NM_001252132, exon 1 of 19) exon (NM_001252132, exon 1 of 19) 457 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak2_46_15_1.27366130330205_4.63683065165103_2.70027529094734 chr19 9059929 9060221 + 2.70027529094734 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 27881 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_308_182_0.455668149428394_7.74353391299824_2.69885570218488 chr18 75454164 75456681 + 2.69885570218488 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -59223 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_72_29_0.997524839957408_5.40565301558722_2.69560598044942 chr3 129724766 129725409 + 2.69560598044942 NA promoter-TSS (NM_001310737) promoter-TSS (NM_001310737) -1 NM_001329594 13645 Mm.252481 NM_010113 ENSMUSG00000028017 Egf AI790464 epidermal growth factor protein-coding common_peak1_89_39_0.882385072965977_5.76312063137035_2.69422232619315 chr3 105055261 105055755 + 2.69422232619315 NA Intergenic Intergenic -2362 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_468_294_0.364530963818824_8.38683662615862_2.69035866394414 chr5 136564914 136568780 + 2.69035866394414 NA promoter-TSS (NM_001291233) promoter-TSS (NM_001291233) 643 NM_001291234 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_81_111_-0.736395354457166_6.43915724482902_2.68747123914389 chr9 41586324 41588294 + 2.68747123914389 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 5383 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_254_145_0.506388840291279_7.44301897902566_2.68479275873649 chr6 91207986 91209849 + 2.68479275873649 NA Intergenic Intergenic -3847 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_177_207_-0.519187471314408_7.44084598248389_2.68479275873649 chr17 79712338 79714889 + 2.68479275873649 NA exon (NM_009994, exon 2 of 3) exon (NM_009994, exon 2 of 3) 1428 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak1_69_98_-0.785055607107051_6.23682881652608_2.68428829838239 chr1 132311091 132312057 + 2.68428829838239 NA Intergenic Intergenic -4551 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_94_42_0.855500619023683_5.85401506421394_2.68272915619607 chr7 25711111 25711822 + 2.68272915619607 NA 3' UTR (NM_028771, exon 5 of 5) 3' UTR (NM_028771, exon 5 of 5) 7587 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding unique_peak2_13_34_-1.5905289435798_4.33401854515507_2.68200767086288 chr13 91359402 91359711 + 2.68200767086288 NA Intergenic Intergenic 28529 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA unique_peak2_13_34_-1.5905289435798_4.33401854515507_2.68200767086288-4 chr6 34583684 34584146 + 2.68200767086288 NA Intergenic Intergenic -14589 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_40_12_1.37757482903259_4.38922713265739_2.68200767086288 chr14 76880116 76880746 + 2.68200767086288 NA Intergenic Intergenic 120300 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_40_12_1.37757482903259_4.38922713265739_2.68200767086288-2 chr15 98108523 98108871 + 2.68200767086288 NA intron (NM_001357688, intron 1 of 22) intron (NM_001357688, intron 1 of 22) 141 NM_001357688 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding unique_peak1_40_12_1.37757482903259_4.38922713265739_2.68200767086288-5 chr6 17142292 17142715 + 2.68200767086288 NA intron (NR_153844, intron 1 of 2) intron (NR_153844, intron 1 of 2) 29330 NR_153844 232599 Mm.430719 NM_177689 Gm4876 B930018B01|EG232599 predicted gene 4876 ncRNA unique_peak1_40_12_1.37757482903259_4.38922713265739_2.68200767086288-4 chr2 103270804 103271617 + 2.68200767086288 NA intron (NM_007914, intron 6 of 8) intron (NM_007914, intron 6 of 8) 31986 NM_007914 13661 Mm.10724 NM_007914 ENSMUSG00000012350 Ehf 9030625L19Rik|AU019492 ets homologous factor protein-coding unique_peak1_40_12_1.37757482903259_4.38922713265739_2.68200767086288-3 chr18 16744386 16744782 + 2.68200767086288 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 64662 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak2_40_12_1.37757482903259_4.38922713265739_2.68200767086288 chr3 96269067 96269299 + 2.68200767086288 NA promoter-TSS (NM_175666) promoter-TSS (NM_175666) -517 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding unique_peak2_13_34_-1.5905289435798_4.33401854515507_2.68200767086288-2 chr17 84510015 84510321 + 2.68200767086288 NA Intergenic Intergenic -1727 NM_001357986 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding unique_peak2_13_34_-1.5905289435798_4.33401854515507_2.68200767086288-3 chr18 70568794 70569246 + 2.68200767086288 NA intron (NM_010773, intron 1 of 6) intron (NM_010773, intron 1 of 6) 728 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak2_171_90_0.624337930864248_6.81996360563082_2.68027755882578 chr3 38483830 38484694 + 2.68027755882578 NA intron (NM_001167883, intron 1 of 3) intron (NM_001167883, intron 1 of 3) 554 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak1_164_86_0.629669428156422_6.75777820992694_2.679892106767 chr19 16366768 16367974 + 2.679892106767 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -52367 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_269_156_0.483473041615924_7.53635726969959_2.67810579670182 chr3 107758422 107760899 + 2.67810579670182 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 809 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_114_54_0.774095507452229_6.16840746725077_2.67801674429151 chr14 54894209 54895022 + 2.67801674429151 NA intron (NM_019402, intron 1 of 6) CpG 472 NM_019402 54196 Mm.7723 NM_019402 ENSMUSG00000022194 Pabpn1 PAB2|Pabp3|mPABII poly(A) binding protein, nuclear 1 protein-coding common_peak1_65_94_-0.809844603506433_6.16493330657773_2.67801674429148 chr18 39491032 39492016 + 2.67801674429148 NA Intergenic CpG -4279 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_54_82_-0.876207129995985_5.93693586634893_2.67606589893834 chr1 167307903 167308543 + 2.67606589893834 NA promoter-TSS (NM_001039483) promoter-TSS (NM_001039483) -447 NM_001039483 68944 Mm.330045 NM_026881 ENSMUSG00000052428 Tmco1 1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39 transmembrane and coiled-coil domains 1 protein-coding common_peak1_54_82_-0.876207129995985_5.93693586634893_2.67606589893834 chr4 133813517 133814105 + 2.67606589893834 NA Intergenic CpG -60200 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding unique_peak2_19_42_-1.37656781173042_4.73798084883689_2.67563291309485-2 chr9 108953401 108954195 + 2.67563291309485 NA promoter-TSS (NM_007738) promoter-TSS (NM_007738) 53 NM_007738 12836 Mm.6200 NM_007738 ENSMUSG00000025650 Col7a1 AW209154 collagen, type VII, alpha 1 protein-coding common_peak2_20_42_-1.30667507910947_4.77292721514736_2.67563291309485 chr8 11265190 11265859 + 2.67563291309485 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -47281 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_19_42_-1.37656781173042_4.73798084883689_2.67563291309485 chr4 150746407 150746774 + 2.67563291309485 NA Intergenic Intergenic -94416 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak2_20_42_-1.30667507910947_4.77292721514736_2.67563291309485 chr19 9898610 9899379 + 2.67563291309485 NA intron (NM_016692, intron 1 of 17) intron (NM_016692, intron 1 of 17) 539 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding unique_peak1_50_17_1.22074145812159_4.78029573050311_2.67563291309484-3 chr19 44905675 44906312 + 2.67563291309484 NA Intergenic Intergenic -25126 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding unique_peak1_50_17_1.22074145812159_4.78029573050311_2.67563291309484-4 chr3 55113606 55114232 + 2.67563291309484 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 1753 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding unique_peak1_50_17_1.22074145812159_4.78029573050311_2.67563291309484-2 chr15 95848287 95848870 + 2.67563291309484 NA intron (NM_001253813, intron 2 of 20) intron (NM_001253813, intron 2 of 20) -18506 NR_155276 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA unique_peak1_50_17_1.22074145812159_4.78029573050311_2.67563291309484 chr13 29505032 29505526 + 2.67563291309484 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 350394 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_61_90_-0.837345100645915_6.08912208987574_2.67426933041074 chr15 75272244 75273171 + 2.67426933041074 NA TTS (NM_008530) TTS (NM_008530) 4286 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding common_peak1_109_51_0.791337603636602_6.09610851995939_2.67426933041073 chr19 17255231 17256197 + 2.67426933041073 NA Intergenic Intergenic 83791 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_329_350_-0.389769275872656_8.26044258236823_2.67063003342804 chr16 55819009 55822023 + 2.67063003342804 NA intron (NM_001159395, intron 2 of 12) intron (NM_001159395, intron 2 of 12) 1622 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_233_131_0.528705300405082_7.30874676956099_2.66926711378057 chr7 144038477 144040554 + 2.66926711378057 NA Intergenic Intergenic 30261 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak2_9_27_-1.75060299951269_3.93205342230126_2.66623981987189 chr7 65790240 65790577 + 2.66623981987189 NA Intergenic Intergenic -13644 NR_045301 100503969 Mm.383527 NR_045301 1810008I18Rik - RIKEN cDNA 1810008I18 gene ncRNA unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-6 chr2 27888587 27888968 + 2.66623981987189 NA intron (NM_015734, intron 1 of 65) intron (NM_015734, intron 1 of 65) 2352 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-2 chr15 66852038 66852498 + 2.66623981987189 NA Intergenic Intergenic -20439 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189 chr5 92043243 92043706 + 2.66623981987189 NA promoter-TSS (NM_016912) promoter-TSS (NM_016912) -432 NM_016912 53886 Mm.44963 NM_016912 ENSMUSG00000029403 Cdkl2 5330436L21Rik|AI505225|KKIAMRE|Kkm cyclin-dependent kinase-like 2 (CDC2-related kinase) protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-8 chr7 130341186 130341648 + 2.66623981987189 NA Intergenic Intergenic -74609 NM_201601 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-4 chr19 27369285 27369634 + 2.66623981987189 NA Intergenic Intergenic 46840 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-3 chr15 98916631 98917008 + 2.66623981987189 NA intron (NM_029098, intron 1 of 16) intron (NM_029098, intron 1 of 16) 1279 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189 chr11 101690768 101691181 + 2.66623981987189 NA Intergenic Intergenic 25433 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-7 chr6 28215254 28215858 + 2.66623981987189 NA Intergenic CpG 46045 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding unique_peak1_32_8_1.59714098295545_3.96849549292004_2.66623981987189-5 chr2 24407535 24407828 + 2.66623981987189 NA 3' UTR (NM_177611, exon 17 of 17) 3' UTR (NM_177611, exon 17 of 17) 21065 NM_001355232 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding common_peak1_125_61_0.732119008286716_6.32025581453023_2.66291228502395 chr14 26533953 26535016 + 2.66291228502395 NA 5' UTR (NM_001347494, exon 1 of 20) 5' UTR (NM_001347494, exon 1 of 20) 140 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak2_73_103_-0.776533956656894_6.31217273981265_2.66291228502394 chr5 104398151 104399159 + 2.66291228502394 NA Intergenic Intergenic -36456 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_178_95_0.604315071615352_6.88712003652883_2.6624111371085 chr1 125560064 125561769 + 2.6624111371085 NA promoter-TSS (NM_028787) promoter-TSS (NM_028787) -86 NM_028787 74150 Mm.28654 NM_028787 ENSMUSG00000026342 Slc35f5 1300003P13Rik|AI646727 solute carrier family 35, member F5 protein-coding common_peak2_178_95_0.604315071615352_6.88712003652883_2.6624111371085 chr1 125560057 125561751 + 2.6624111371085 NA promoter-TSS (NM_028787) promoter-TSS (NM_028787) -98 NM_028787 74150 Mm.28654 NM_028787 ENSMUSG00000026342 Slc35f5 1300003P13Rik|AI646727 solute carrier family 35, member F5 protein-coding common_peak2_38_64_-1.01599403634589_5.51437079485551_2.66218884881338 chr17 78524025 78524798 + 2.66218884881338 NA intron (NM_001197028, intron 1 of 12) intron (NM_001197028, intron 1 of 12) 16348 NM_028813 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding common_peak1_77_32_0.954924677750871_5.52185645823389_2.66218884881337 chr12 8812401 8813282 + 2.66218884881337 NA Intergenic Intergenic 41445 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak2_27_51_-1.16874062434917_5.11606940596651_2.65992162410571 chr2 117655638 117656782 + 2.65992162410571 NA Intergenic Intergenic 156592 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_58_21_1.13996946668538_5.02941635197999_2.65769701904854-2 chr15 80707229 80708016 + 2.65769701904854 NA Intergenic Intergenic -3691 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak1_58_21_1.13996946668538_5.02941635197999_2.65769701904854-3 chr7 123370343 123370900 + 2.65769701904854 NA promoter-TSS (NM_001122643) promoter-TSS (NM_001122643) -706 NM_001316713 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak1_58_21_1.13996946668538_5.02941635197999_2.65769701904854 chr19 57314113 57314859 + 2.65769701904854 NA Intergenic CpG 40526 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA unique_peak1_58_21_1.13996946668538_5.02941635197999_2.65769701904854 chr13 32883913 32884880 + 2.65769701904854 NA intron (NM_173051, intron 4 of 6) intron (NM_173051, intron 4 of 6) 13744 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak1_57_21_1.11548140273997_5.01717232000728_2.65769701904854 chr17 25184692 25185245 + 2.65769701904854 NA exon (NM_183150, exon 2 of 2) exon (NM_183150, exon 2 of 2) 407 NM_183150 214489 Mm.274433 NM_183150 ENSMUSG00000067722 BC003965 Ccsmst1 cDNA sequence BC003965 protein-coding common_peak1_205_113_0.557642371320242_7.11171119982486_2.65380632748665 chr8 119838737 119841138 + 2.65380632748665 NA intron (NM_028071, intron 2 of 3) B1F1|SINE|Alu 642 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_120_58_0.745667711614483_6.25547690516908_2.65320177846716 chr10 78217086 78218730 + 2.65320177846716 NA intron (NM_001081055, intron 5 of 22) intron (NM_001081055, intron 5 of 22) 26734 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1|b2b2416Clo|b2b2613Clo trafficking protein particle complex 10 protein-coding unique_peak1_120_58_0.745667711614483_6.25547690516908_2.65320177846716 chr19 41991835 41993436 + 2.65320177846716 NA intron (NM_145500, intron 1 of 2) B3|SINE|B2 10872 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak2_70_99_-0.779235448067993_6.25423846574073_2.65320177846716 chr12 105685287 105686190 + 2.65320177846716 NA promoter-TSS (NM_029654) promoter-TSS (NM_029654) 386 NM_178613 66787 Mm.248019 NM_178613 ENSMUSG00000044715 Gskip 4933433P14Rik GSK3B interacting protein protein-coding common_peak1_91_40_0.878246317604927_5.79667516342055_2.65122226385246-2 chr9 51056906 51057827 + 2.65122226385246 NA exon (NM_001033534, exon 8 of 8) exon (NM_001033534, exon 8 of 8) 19728 NM_001033534 244864 Mm.335152 NM_001033534 ENSMUSG00000060594 Layn E030012M19Rik|Gm511 layilin protein-coding common_peak1_91_40_0.878246317604927_5.79667516342055_2.65122226385246 chr19 5430159 5430989 + 2.65122226385246 NA Intergenic Intergenic 5430 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak2_87_117_-0.710522626338026_6.52738173619283_2.65010375476553 chr16 18288013 18289279 + 2.65010375476553 NA intron (NM_033324, intron 1 of 13) intron (NM_033324, intron 1 of 13) 522 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DGCR8, microprocessor complex subunit protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-22 chr6 86903836 86904167 + 2.65002542325363 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 54484 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-6 chr15 58212300 58212635 + 2.65002542325363 NA intron (NM_026346, intron 1 of 8) intron (NM_026346, intron 1 of 8) 2425 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding unique_peak2_2_17_-2.83788441627733_2.75098279330365_2.65002542325363-3 chr13 104155335 104155641 + 2.65002542325363 NA intron (NM_001360778, intron 5 of 11) PB1D9|SINE|Alu 22978 NM_025879 66975 Mm.272541 NM_025879 ENSMUSG00000021711 Trappc13 2410002O22Rik|2610524F24Rik|AI451892|AU017229 trafficking protein particle complex 13 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-11 chr15 61162037 61162460 + 2.65002542325363 NA Intergenic Intergenic -240978 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-3 chr10 24489799 24490150 + 2.65002542325363 NA Intergenic Intergenic -105468 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-3 chr12 84835664 84835948 + 2.65002542325363 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -39996 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363 chr10 24570811 24571044 + 2.65002542325363 NA Intergenic Intergenic -24515 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-6 chr6 99438152 99438408 + 2.65002542325363 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -2935 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-5 chr11 74862702 74862891 + 2.65002542325363 NA intron (NM_197943, intron 11 of 22) intron (NM_197943, intron 11 of 22) 5398 NR_105891 102465558 NR_105891 ENSMUSG00000098317 Mir6926 Gm27949|mmu-mir-6926 microRNA 6926 ncRNA unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-2 chr10 17361813 17362068 + 2.65002542325363 NA Intergenic Intergenic -266158 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-16 chr3 84449286 84449512 + 2.65002542325363 NA intron (NM_001033301, intron 10 of 11) intron (NM_001033301, intron 10 of 11) 30092 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363 chr1 194926074 194926408 + 2.65002542325363 NA Intergenic Intergenic -12580 NM_001111059 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-27 chr8 80833778 80834059 + 2.65002542325363 NA intron (NM_021356, intron 1 of 9) B3A|SINE|B2 46561 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak2_2_17_-2.83788441627733_2.75098279330365_2.65002542325363-4 chr17 35797286 35797541 + 2.65002542325363 NA Intergenic Intergenic -24300 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-19 chr3 145675662 145676029 + 2.65002542325363 NA Intergenic Intergenic -25860 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-5 chr14 70067551 70067827 + 2.65002542325363 NA Intergenic Intergenic -9756 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-17 chr4 42950464 42950741 + 2.65002542325363 NA 5' UTR (NM_001355440, exon 1 of 4) 5' UTR (NM_001355440, exon 1 of 4) 206 NM_001355440 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-8 chr13 91939215 91939442 + 2.65002542325363 NA intron (NM_009027, intron 5 of 14) intron (NM_009027, intron 5 of 14) 48714 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-17 chr3 89590907 89591255 + 2.65002542325363 NA intron (NM_080466, intron 2 of 7) intron (NM_080466, intron 2 of 7) 70917 NM_080466 140493 Mm.120250 NM_080466 ENSMUSG00000000794 Kcnn3 KCa2.3|SK3|SKCA3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-28 chr8 14252317 14252697 + 2.65002542325363 NA intron (NM_172910, intron 2 of 15) intron (NM_172910, intron 2 of 15) 156632 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-13 chr19 5068072 5068443 + 2.65002542325363 NA exon (NM_054042, exon 1 of 1) exon (NM_054042, exon 1 of 1) 179 NM_054042 70445 Mm.29597 NM_054042 ENSMUSG00000056481 Cd248 2610111G01Rik|AI842296|Cd164l1|Tem1 CD248 antigen, endosialin protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-21 chr6 17465533 17465753 + 2.65002542325363 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 1686 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-23 chr6 72383199 72383420 + 2.65002542325363 NA Intergenic Intergenic -2841 NM_016872 53620 Mm.440321 NM_016872 ENSMUSG00000073002 Vamp5 AF119384|Camp vesicle-associated membrane protein 5 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-14 chr2 166045476 166045739 + 2.65002542325363 NA intron (NM_008679, intron 2 of 22) intron (NM_008679, intron 2 of 22) 52970 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-28 chr8 108906234 108906597 + 2.65002542325363 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -30445 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-14 chr19 44761936 44762199 + 2.65002542325363 NA intron (NM_011037, intron 3 of 9) intron (NM_011037, intron 3 of 9) 4673 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-11 chr19 30942456 30942671 + 2.65002542325363 NA intron (NM_001013833, intron 4 of 17) intron (NM_001013833, intron 4 of 17) -11601 NR_033643 625995 Mm.454508 NR_033643 Gm6642 EG625995 ubiquitin-like 5 pseudogene pseudo unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-7 chr7 130250679 130250993 + 2.65002542325363 NA intron (NM_010207, intron 2 of 17) intron (NM_010207, intron 2 of 17) 15972 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-7 chr12 17724807 17725132 + 2.65002542325363 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 34160 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-24 chr7 139525405 139525929 + 2.65002542325363 NA exon (NM_001127363, exon 8 of 16) exon (NM_001127363, exon 8 of 16) 57130 NM_183248 14912 Mm.28308 NM_183248 ENSMUSG00000041309 Nkx6-2 Gtx|Nkx6.2 NK6 homeobox 2 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-18 chr4 97818273 97818667 + 2.65002542325363 NA intron (NM_010905, intron 2 of 10) intron (NM_010905, intron 2 of 10) 40844 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-23 chr6 108418345 108418686 + 2.65002542325363 NA intron (NM_010585, intron 39 of 61) intron (NM_010585, intron 39 of 61) -71228 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-4 chr18 65520708 65520952 + 2.65002542325363 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -59400 NM_207255 328977 Mm.286232 NM_207255 ENSMUSG00000042439 Zfp532 C530030I18Rik|Znf532|mKIAA1629 zinc finger protein 532 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-29 chr8 122531516 122531706 + 2.65002542325363 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 19718 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-20 chr5 36191047 36191419 + 2.65002542325363 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -12788 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-15 chr2 141289796 141290112 + 2.65002542325363 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -618478 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-9 chr17 14620521 14620966 + 2.65002542325363 NA Intergenic Intergenic 73519 NM_011581 21826 Mm.26688 NM_011581 ENSMUSG00000023885 Thbs2 TSP2|Thbs-2 thrombospondin 2 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-31 chrX 152337049 152337315 + 2.65002542325363 NA 3' UTR (NM_001358369, exon 7 of 7) 3' UTR (NM_001358369, exon 7 of 7) 5302 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-6 chr11 76157856 76158311 + 2.65002542325363 NA intron (NM_026664, intron 4 of 21) intron (NM_026664, intron 4 of 21) 21547 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-25 chr7 142384584 142384999 + 2.65002542325363 NA intron (NM_009983, intron 2 of 8) intron (NM_009983, intron 2 of 8) 3079 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-12 chr19 55641974 55642244 + 2.65002542325363 NA non-coding (NR_045318, exon 4 of 4) non-coding (NR_045318, exon 4 of 4) 60095 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-19 chr4 123563851 123564156 + 2.65002542325363 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -52417 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-8 chr16 66627183 66627432 + 2.65002542325363 NA Intergenic Intergenic -29811 NR_040512 75501 Mm.394300 NR_040512 ENSMUSG00000092599 1700010K23Rik - RIKEN cDNA 1700010K23 gene ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-29 chr8 70172440 70172696 + 2.65002542325363 NA intron (NM_001293797, intron 1 of 10) intron (NM_001293797, intron 1 of 10) 160 NR_122028 234371 Mm.23488 NM_145597 ENSMUSG00000002342 Tmem161a AI428876|BB161850|BC021367 transmembrane protein 161A protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-21 chr5 136085681 136086045 + 2.65002542325363 NA intron (NM_001039103, intron 1 of 19) intron (NM_001039103, intron 1 of 19) 1947 NM_001039103 54153 Mm.290655 NM_133914 ENSMUSG00000004952 Rasa4 AA793972|AW112107|BB079060|CAPRI|GAPL RAS p21 protein activator 4 protein-coding unique_peak2_2_17_-2.83788441627733_2.75098279330365_2.65002542325363 chr10 120597618 120597840 + 2.65002542325363 NA Intergenic Intergenic -121260 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-26 chr7 78922470 78922769 + 2.65002542325363 NA Intergenic Intergenic 8384 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-13 chr2 32891567 32891831 + 2.65002542325363 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 15565 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-9 chr14 8332101 8332290 + 2.65002542325363 NA Intergenic Intergenic -14588 NM_001360339 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-25 chr7 49885521 49885739 + 2.65002542325363 NA Intergenic Intergenic -24669 NM_001146013 104245 Mm.207053 NM_148931 ENSMUSG00000039728 Slc6a5 Glyt2|prestin solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-26 chr8 71570846 71571043 + 2.65002542325363 NA intron (NM_001357180, intron 2 of 12) intron (NM_001357180, intron 2 of 12) 350 NM_001357182 26457 Mm.38165 NM_011977 ENSMUSG00000031808 Slc27a1 FATP1|Fatp solute carrier family 27 (fatty acid transporter), member 1 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-2 chr10 60350068 60350415 + 2.65002542325363 NA intron (NM_028732, intron 1 of 6) intron (NM_028732, intron 1 of 6) 3390 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-16 chr3 96127326 96127865 + 2.65002542325363 NA intron (NM_001025613, intron 2 of 12) intron (NM_001025613, intron 2 of 12) 23068 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak2_2_17_-2.83788441627733_2.75098279330365_2.65002542325363-2 chr12 105554618 105555095 + 2.65002542325363 NA Intergenic ID_B1|SINE|B4 -8316 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 protein-coding unique_peak2_2_17_-2.83788441627733_2.75098279330365_2.65002542325363-5 chr5 3367904 3368106 + 2.65002542325363 NA intron (NM_009873, intron 2 of 7) intron (NM_009873, intron 2 of 7) 24112 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-5 chr2 117009988 117010191 + 2.65002542325363 NA Intergenic Intergenic 109937 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-10 chr19 6243135 6243464 + 2.65002542325363 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 1631 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-22 chr6 5256054 5256351 + 2.65002542325363 NA promoter-TSS (NM_173006) promoter-TSS (NM_173006) 31 NM_173006 269823 Mm.9122 NM_173006 ENSMUSG00000029759 Pon3 2810004E20|AI786302 paraoxonase 3 protein-coding unique_peak2_3_17_-2.42577499807803_2.9570375024033_2.65002542325363-8 chr8 47673152 47673402 + 2.65002542325363 NA intron (NM_023503, intron 1 of 1) intron (NM_023503, intron 1 of 1) 1882 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-4 chr12 85603379 85603734 + 2.65002542325363 NA intron (NM_001205053, intron 1 of 3) intron (NM_001205053, intron 1 of 3) 3538 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-12 chr17 75212595 75212874 + 2.65002542325363 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 33953 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-24 chr6 131382691 131382888 + 2.65002542325363 NA intron (NM_011733, intron 3 of 8) intron (NM_011733, intron 3 of 8) 5661 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-30 chr9 71647066 71647394 + 2.65002542325363 NA intron (NM_001304362, intron 12 of 18) B3|SINE|B2 -54870 NM_001033208 102371 Mm.27585 NM_001033208 ENSMUSG00000041361 Myzap AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap myocardial zonula adherens protein protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-3 chr11 68864989 68865235 + 2.65002542325363 NA Intergenic Intergenic -11981 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-18 chr3 122342132 122342497 + 2.65002542325363 NA Intergenic Intergenic -48611 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-7 chr15 73435744 73436087 + 2.65002542325363 NA Intergenic Intergenic -12724 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-10 chr14 103347051 103347255 + 2.65002542325363 NA promoter-TSS (NM_207215) promoter-TSS (NM_207215) -353 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-27 chr8 9021587 9021876 + 2.65002542325363 NA Intergenic Intergenic 110557 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-20 chr4 115768261 115768495 + 2.65002542325363 NA intron (NM_172698, intron 10 of 11) intron (NM_172698, intron 10 of 11) 12656 NM_029196 75173 Mm.331798 NM_029196 ENSMUSG00000044556 Tex38 4930544O15Rik|Theg4 testis expressed 38 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-2 chr1 154085976 154086394 + 2.65002542325363 NA Intergenic Intergenic -115002 NM_001204908 100503355 Mm.484410 NM_001204908 ENSMUSG00000066797 Zfp648 Gm10178|Gm203 zinc finger protein 648 protein-coding unique_peak1_19_3_2.04969694297167_3.02484847148584_2.65002542325363-15 chr3 65926197 65926409 + 2.65002542325363 NA Intergenic Intergenic 31946 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363-4 chr11 29647705 29647963 + 2.65002542325363 NA Intergenic Intergenic -45064 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_20_3_2.11958967559262_3.05979483779631_2.65002542325363 chr1 91943080 91943292 + 2.65002542325363 NA intron (NM_207225, intron 24 of 26) intron (NM_207225, intron 24 of 26) 141725 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_78_108_-0.75061665850165_6.3928759955261_2.64637717862733 chr13 107676021 107677828 + 2.64637717862733 NA Intergenic Intergenic -10473 NR_045900 72257 Mm.234155 NR_045900 ENSMUSG00000102000 1700006H21Rik - RIKEN cDNA 1700006H21 gene ncRNA common_peak2_66_95_-0.803409483080769_6.18325775918077_2.64553091153294 chr11 51856706 51857598 + 2.64553091153294 NA intron (NM_001357588, intron 1 of 12) CpG 329 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_51_79_-0.903444900005494_5.87020564488462_2.64247392621752 chr13 5713915 5715298 + 2.64247392621752 NA Intergenic Intergenic 143486 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_73_30_0.969709451097323_5.43905103593554_2.64075047711344 chr14 54431698 54432723 + 2.64075047711344 NA intron (NM_008608, intron 1 of 9) CpG 612 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding common_peak1_82_35_0.918398619448606_5.62912431116662_2.63787302070503 chr12 86871564 86872316 + 2.63787302070503 NA Intergenic Intergenic 12874 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_42_68_-0.962281926568737_5.6273834934938_2.63787302070503 chr1 106400325 106400733 + 2.63787302070503 NA Intergenic Intergenic 146102 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_82_35_0.918398619448606_5.62912431116662_2.63787302070503-2 chr16 13819326 13820443 + 2.63787302070503 NA intron (NM_001346109, intron 1 of 7) intron (NM_001346109, intron 1 of 7) 633 NM_001346111 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding common_peak2_42_68_-0.962281926568737_5.6273834934938_2.63787302070503 chr12 79608806 79610390 + 2.63787302070503 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 312247 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_42_68_-0.962281926568737_5.6273834934938_2.63787302070503-2 chr2 117882508 117883690 + 2.63787302070503 NA intron (NR_040631, intron 3 of 5) intron (NR_040631, intron 3 of 5) 61171 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_42_68_-0.962281926568737_5.6273834934938_2.63787302070503-2 chr2 50295880 50296672 + 2.63787302070503 NA promoter-TSS (NR_040361) promoter-TSS (NR_040361) 525 NM_001348200 109129 Mm.29214 NM_133839 ENSMUSG00000026766 Mmadhc 2010311D03Rik|AI314967|CblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding unique_peak2_16_37_-1.43104167653389_4.53240667517664_2.63673708350642 chr2 83699927 83700574 + 2.63673708350642 NA Intergenic Intergenic -24147 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641 chr15 66677382 66678247 + 2.63673708350641 NA intron (NM_009375, intron 5 of 47) intron (NM_009375, intron 5 of 47) 7044 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641-6 chr6 88927295 88927717 + 2.63673708350641 NA Intergenic Intergenic 25255 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641-5 chr5 5689679 5690026 + 2.63673708350641 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 4237 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641-3 chr17 35667726 35668115 + 2.63673708350641 NA promoter-TSS (NM_175137) promoter-TSS (NM_175137) -328 NM_175137 68915 Mm.32002 NM_175137 ENSMUSG00000038838 Vars2 1190004I24Rik|Vars2l|mKIAA1885 valyl-tRNA synthetase 2, mitochondrial protein-coding common_peak2_44_14_1.30447755181807_4.55912937151755_2.63673708350641 chr16 4595900 4596144 + 2.63673708350641 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 1309 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641-7 chr9 113706958 113707528 + 2.63673708350641 NA intron (NM_001164678, intron 1 of 17) intron (NM_001164678, intron 1 of 17) 1016 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding common_peak2_44_14_1.30447755181807_4.55912937151755_2.63673708350641-2 chr2 72995897 72996248 + 2.63673708350641 NA Intergenic Intergenic -15626 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641-4 chr18 34859159 34859700 + 2.63673708350641 NA Intergenic Intergenic -1778 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641 chr15 53170847 53171271 + 2.63673708350641 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 175124 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_44_14_1.30447755181807_4.55912937151755_2.63673708350641-2 chr16 4605771 4606432 + 2.63673708350641 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 11388 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_161_84_0.636936537416668_6.72785920484604_2.63671775885299 chr3 21936825 21938728 + 2.63671775885299 NA Intergenic Intergenic -138876 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-3 chr11 16842619 16842923 + 2.63337704757512 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 90568 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak2_8_25_-1.7946185103219_3.80313046298014_2.63337704757512-3 chr6 134043138 134043526 + 2.63337704757512 NA intron (NM_007961, intron 1 of 7) intron (NM_007961, intron 1 of 7) 7632 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-8 chr3 31025054 31025356 + 2.63337704757512 NA exon (NM_008857, exon 3 of 18) exon (NM_008857, exon 3 of 18) -13761 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-12 chr6 90561100 90561430 + 2.63337704757512 NA intron (NM_001356412, intron 4 of 22) intron (NM_001356412, intron 4 of 22) 10472 NM_027406 107747 Mm.30035 NM_027406 ENSMUSG00000030088 Aldh1l1 1810048F20Rik|FDH|Fthfd|Neut2 aldehyde dehydrogenase 1 family, member L1 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-9 chr3 37888765 37889239 + 2.63337704757512 NA Intergenic Intergenic -9811 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_8_25_-1.7946185103219_3.80313046298014_2.63337704757512 chr14 20608083 20608338 + 2.63337704757512 NA intron (NM_030180, intron 1 of 20) intron (NM_030180, intron 1 of 20) 10144 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding unique_peak2_8_25_-1.7946185103219_3.80313046298014_2.63337704757512-2 chr12 84879790 84880213 + 2.63337704757512 NA TTS (NR_028577) TTS (NR_028577) -3506 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-10 chr5 103910717 103911105 + 2.63337704757512 NA intron (NM_001359986, intron 1 of 10) CpG 348 NM_001359987 246293 Mm.179871 NM_178741 ENSMUSG00000029312 Klhl8 2310001P09Rik|D5Ertd431e kelch-like 8 protein-coding unique_peak2_7_25_-1.96334469435005_3.71876737096607_2.63337704757512 chr7 16453042 16453560 + 2.63337704757512 NA intron (NM_026938, intron 1 of 2) intron (NM_026938, intron 1 of 2) 522 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-13 chr7 100926198 100926630 + 2.63337704757512 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 5747 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-5 chr13 109903248 109903621 + 2.63337704757512 NA promoter-TSS (NR_035442) promoter-TSS (NR_035442) -375 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-4 chr13 63141403 63141848 + 2.63337704757512 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) -98404 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_8_25_-1.7946185103219_3.80313046298014_2.63337704757512 chr1 53297277 53297582 + 2.63337704757512 NA promoter-TSS (NM_153556) promoter-TSS (NM_153556) 334 NM_145517 227102 Mm.212846 NM_145517 ENSMUSG00000026097 Ormdl1 C730042F17Rik ORM1-like 1 (S. cerevisiae) protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-7 chr16 89960371 89960642 + 2.63337704757512 NA intron (NM_001145886, intron 1 of 27) intron (NM_001145886, intron 1 of 27) 321 NM_009384 21844 Mm.310902 NM_009384 ENSMUSG00000002489 Tiam1 AI847750|D16Ium10|D16Ium10e T cell lymphoma invasion and metastasis 1 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-11 chr6 34237191 34237676 + 2.63337704757512 NA Intergenic Intergenic -60379 NM_021435 58246 Mm.245527 NM_021435 ENSMUSG00000018999 Slc35b4 4930474D06Rik|AB041549|AW494345 solute carrier family 35, member B4 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512 chr1 193521182 193521436 + 2.63337704757512 NA Intergenic Intergenic -13779 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512 chr8 105340177 105340570 + 2.63337704757512 NA intron (NM_177699, intron 1 of 21) (CACCC)n|Simple_repeat|Simple_repeat 7597 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-6 chr14 69468300 69468965 + 2.63337704757512 NA Intergenic ID_B1|SINE|B4 43917 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-2 chr10 108362073 108362388 + 2.63337704757512 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 30041 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_29_7_1.63053254519913_3.81526627259956_2.63337704757512-14 chrX 142026264 142026555 + 2.63337704757512 NA Intergenic Intergenic 170527 NM_001007576 245650 Mm.208511 NM_001007576 ENSMUSG00000042282 Gucy2f A930002I06|GC-F|GC2 guanylate cyclase 2f protein-coding common_peak2_145_175_-0.562071162644615_7.17839603731499_2.63148050551297 chr8 128661580 128663298 + 2.63148050551297 NA Intergenic Intergenic -23215 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_209_237_-0.476736127681174_7.65644969946736_2.62961456735041 chr9 102777950 102779533 + 2.62961456735041 NA Intergenic Intergenic 39093 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_221_124_0.531902099476321_7.23173533440025_2.62783868384816 chr3 87154259 87156119 + 2.62783868384816 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 19558 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042-2 chr16 7447237 7447759 + 2.62629506227042 NA Intergenic Intergenic 377663 NM_183188 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding unique_peak2_12_32_-1.6118009653301_4.23849363669341_2.62629506227042 chr13 5843026 5843561 + 2.62629506227042 NA Intergenic Intergenic 14799 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_12_32_-1.6118009653301_4.23849363669341_2.62629506227042-3 chr9 13247020 13247542 + 2.62629506227042 NA intron (NM_025534, intron 1 of 8) intron (NM_025534, intron 1 of 8) 325 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak2_12_32_-1.6118009653301_4.23849363669341_2.62629506227042 chr10 80167001 80167287 + 2.62629506227042 NA promoter-TSS (NM_007705) promoter-TSS (NM_007705) -695 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak2_12_32_-1.6118009653301_4.23849363669341_2.62629506227042-2 chr2 152553732 152554359 + 2.62629506227042 NA Intergenic Intergenic -14004 NM_001001444 75400 Mm.45560 NM_001001444 ENSMUSG00000044249 Defb29 0610030I09Rik|BD-29|mBD-29 defensin beta 29 protein-coding common_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042-2 chr5 148995432 148995789 + 2.62629506227042 NA promoter-TSS (NR_102383) promoter-TSS (NR_102383) -395 NR_102384 319982 Mm.33303 NR_102383 ENSMUSG00000106951 5930430L01Rik - RIKEN cDNA 5930430L01 gene ncRNA common_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042 chr13 70803132 70803516 + 2.62629506227042 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 38487 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042-5 chr9 65403984 65404446 + 2.62629506227042 NA intron (NM_001162923, intron 2 of 4) intron (NM_001162923, intron 2 of 4) 5727 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding unique_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042-4 chr7 113139889 113140397 + 2.62629506227042 NA intron (NR_045978, intron 2 of 5) intron (NR_045978, intron 2 of 5) 1872 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042-3 chr17 70739838 70740403 + 2.62629506227042 NA intron (NM_001347411, intron 9 of 14) (A)n|Simple_repeat|Simple_repeat 106657 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_38_11_1.42141127596141_4.29566813870186_2.62629506227042 chr13 93940662 93941141 + 2.62629506227042 NA 3' UTR (NM_009712, exon 8 of 8) 3' UTR (NM_009712, exon 8 of 8) -116895 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_163_193_-0.536008254159934_7.33190871510716_2.6253270772568 chr9 58306825 58310101 + 2.6253270772568 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 4749 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_144_73_0.678061574928952_6.54848415309343_2.6250316740845 chr7 68022163 68023347 + 2.6250316740845 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 70498 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_71_100_-0.773555213652334_6.27143387592563_2.62292522617173 chr10 68248715 68249890 + 2.62292522617173 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 29424 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_33_58_-1.07281219202539_5.34623695334915_2.62199132005206 chr10 122848368 122849465 + 2.62199132005206 NA intron (NM_001110218, intron 4 of 9) intron (NM_001110218, intron 4 of 9) 136808 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak1_87_38_0.886718204161567_5.72876132094303_2.62085056578726 chr15 102399319 102400224 + 2.62085056578726 NA Intergenic Intergenic -6545 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak2_80_109_-0.727977260397046_6.41737108332614_2.61900873805042 chr7 49602000 49603602 + 2.61900873805042 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 34034 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_168_89_0.615073249216268_6.79938972093781_2.61599394331666 chr5 20701667 20703189 + 2.61599394331666 NA 3' UTR (NM_001170745, exon 21 of 21) 3' UTR (NM_001170745, exon 21 of 21) 179696 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak1_156_81_0.643865306406322_6.67948465782125_2.61588793632355 chr1 159231597 159232972 + 2.61588793632355 NA promoter-TSS (NM_001360878) promoter-TSS (NM_001360878) 84 NM_011931 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Cop1 AI316802|C80879|Rfwd2 COP1, E3 ubiquitin ligase protein-coding common_peak1_252_145_0.495109121722257_7.43737911974115_2.61476831433412 chr4 139192961 139194648 + 2.61476831433412 NA promoter-TSS (NM_001271405) promoter-TSS (NM_001271405) -307 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_67_96_-0.79713696442392_6.20134435997517_2.61393185312949 chr16 23127080 23128369 + 2.61393185312949 NA promoter-TSS (NM_145480) promoter-TSS (NM_145480) 6 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding common_peak2_171_200_-0.518919120115984_7.39159213112094_2.61232085480036 chr8 115704487 115707777 + 2.61232085480036 NA exon (NM_001025577, exon 1 of 1) exon (NM_001025577, exon 1 of 1) 762 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_78_33_0.930104825024937_5.55251525376281_2.61214235062553-3 chr7 128591725 128592799 + 2.61214235062553 NA Intergenic B1_Mur1|SINE|Alu -19103 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding common_peak1_78_33_0.930104825024937_5.55251525376281_2.61214235062553-2 chr11 94159265 94160347 + 2.61214235062553 NA Intergenic Intergenic -51648 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak1_78_33_0.930104825024937_5.55251525376281_2.61214235062553 chr11 5740741 5741417 + 2.61214235062553 NA promoter-TSS (NM_001361590) promoter-TSS (NM_001361590) 97 NM_001361590 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak2_39_65_-1.00175215596002_5.54351804137844_2.61214235062553 chr10 83360283 83360818 + 2.61214235062553 NA intron (NM_026579, intron 1 of 3) CpG 329 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding common_peak2_39_65_-1.00175215596002_5.54351804137844_2.61214235062553-2 chr7 19457678 19458715 + 2.61214235062553 NA intron (NM_172279, intron 1 of 16) CpG 298 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding common_peak1_78_33_0.930104825024937_5.55251525376281_2.61214235062553-4 chr9 44478814 44479742 + 2.61214235062553 NA Intergenic Intergenic -3547 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-4 chr11 70020405 70020732 + 2.6100056615562 NA intron (NM_007864, intron 1 of 19) intron (NM_007864, intron 1 of 19) 1963 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562 chr1 135800428 135800689 + 2.6100056615562 NA intron (NM_021467, intron 2 of 8) intron (NM_021467, intron 2 of 8) 1047 NM_001112702 21952 Mm.44379 NM_021467 ENSMUSG00000026418 Tnni1 2700018B22Rik|AI747285|ssTnI troponin I, skeletal, slow 1 protein-coding unique_peak2_6_23_-2.03915344778274_3.56538577682978_2.6100056615562-2 chr12 24706910 24707272 + 2.6100056615562 NA Intergenic Intergenic -1163 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-5 chr11 78366326 78366707 + 2.6100056615562 NA intron (NM_008238, intron 5 of 8) intron (NM_008238, intron 5 of 8) 19806 NM_001313987 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-6 chr19 5053030 5053470 + 2.6100056615562 NA exon (NM_145495, exon 7 of 10) exon (NM_145495, exon 7 of 10) 2442 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-9 chr5 104404185 104404519 + 2.6100056615562 NA Intergenic Intergenic -30759 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-15 chr7 139777345 139777767 + 2.6100056615562 NA Intergenic Intergenic -1462 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-2 chr1 186455085 186455370 + 2.6100056615562 NA Intergenic Intergenic 103454 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-12 chr7 44984116 44984500 + 2.6100056615562 NA intron (NR_045521, intron 1 of 11) intron (NR_045521, intron 1 of 11) 2112 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-3 chr10 82851516 82851754 + 2.6100056615562 NA intron (NM_001042523, intron 1 of 14) intron (NM_001042523, intron 1 of 14) -7571 NM_001042513 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-16 chr9 42461120 42461440 + 2.6100056615562 NA exon (NM_001357656, exon 1 of 8) exon (NM_001357656, exon 1 of 8) 181 NM_001357656 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-13 chr7 100928687 100929036 + 2.6100056615562 NA exon (NM_001081116, exon 1 of 21) exon (NM_001081116, exon 1 of 21) 3300 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-10 chr6 48595321 48595596 + 2.6100056615562 NA intron (NM_001079902, intron 2 of 2) intron (NM_001079902, intron 2 of 2) 1575 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-8 chr4 145229074 145229320 + 2.6100056615562 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 17673 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-14 chr7 139770024 139770270 + 2.6100056615562 NA Intergenic Intergenic -8871 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-11 chr6 135364885 135365431 + 2.6100056615562 NA intron (NM_001288628, intron 1 of 5) intron (NM_001288628, intron 1 of 5) 2227 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding unique_peak1_27_6_1.72434417173432_3.66952700792476_2.6100056615562-7 chr4 57784631 57784955 + 2.6100056615562 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -60455 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak2_6_23_-2.03915344778274_3.56538577682978_2.6100056615562 chr1 59431182 59431513 + 2.6100056615562 NA Intergenic Intergenic -50800 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding common_peak2_49_76_-0.904487678542592_5.8145427014236_2.60976480289815 chr1 186587499 186588471 + 2.60976480289815 NA Intergenic Intergenic -29304 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-9 chr15 97914655 97914856 + 2.60953805094651 NA Intergenic Intergenic -6459 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-27 chr9 14056365 14056873 + 2.60953805094651 NA Intergenic Intergenic -219682 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-4 chr11 89579555 89579830 + 2.60953805094651 NA intron (NM_001327810, intron 2 of 19) intron (NM_001327810, intron 2 of 19) 117244 NM_001327810 382543 Mm.60997 NM_172534 ENSMUSG00000047773 Ankfn1 4932411E22Rik|Gm1175|nmf9 ankyrin-repeat and fibronectin type III domain containing 1 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-8 chr15 76458419 76458686 + 2.60953805094651 NA intron (NM_198885, intron 1 of 1) intron (NM_198885, intron 1 of 1) 1114 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-14 chr3 85881130 85881393 + 2.60953805094651 NA intron (NM_177130, intron 1 of 1) B1F|SINE|Alu 6257 NM_177130 320302 Mm.482978 NM_177130 ENSMUSG00000031286 Glt28d2 4732486J07Rik|Glt28d1l glycosyltransferase 28 domain containing 2 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-5 chr12 85623533 85623838 + 2.60953805094651 NA intron (NM_001205053, intron 2 of 3) intron (NM_001205053, intron 2 of 3) 23667 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-20 chr7 27196510 27196948 + 2.60953805094651 NA promoter-TSS (NM_015782) promoter-TSS (NM_015782) -458 NM_001285825 53607 Mm.386890 NM_015782 ENSMUSG00000061479 Snrpa C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-2 chr1 193412683 193412917 + 2.60953805094651 NA Intergenic Intergenic -42518 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-18 chr6 125477302 125477556 + 2.60953805094651 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 17331 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-13 chr19 28627998 28628330 + 2.60953805094651 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -50060 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-9 chr9 72829033 72829427 + 2.60953805094651 NA intron (NM_175485, intron 2 of 19) intron (NM_175485, intron 2 of 19) 21956 NM_175485 235472 Mm.31696 NM_175485 ENSMUSG00000036030 Prtg A230098A12Rik|Igdcc5 protogenin protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-2 chr1 169699993 169700203 + 2.60953805094651 NA Intergenic (CAGA)n|Simple_repeat|Simple_repeat 44597 NM_009063 19737 Mm.20954 NM_009063 ENSMUSG00000026678 Rgs5 1110070A02Rik regulator of G-protein signaling 5 protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-10 chrX 56731992 56732292 + 2.60953805094651 NA 5' UTR (NM_001077361, exon 1 of 8) 5' UTR (NM_001077361, exon 1 of 8) 185 NM_001077361 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-6 chr12 99940539 99940848 + 2.60953805094651 NA intron (NM_028354, intron 14 of 15) intron (NM_028354, intron 14 of 15) -23806 NM_001164426 217826 Mm.312335 NM_146037 ENSMUSG00000045404 Kcnk13 BB085247|F730021E22Rik|Gm1570|Gm1685 potassium channel, subfamily K, member 13 protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-8 chr9 57420861 57421126 + 2.60953805094651 NA intron (NR_152146, intron 3 of 5) intron (NR_152146, intron 3 of 5) 18743 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-19 chr6 143640423 143640622 + 2.60953805094651 NA intron (NR_045732, intron 1 of 4) intron (NR_045732, intron 1 of 4) 10766 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-25 chr8 104441166 104441396 + 2.60953805094651 NA intron (NM_001013380, intron 2 of 12) intron (NM_001013380, intron 2 of 12) 1766 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-10 chr17 26599659 26600059 + 2.60953805094651 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 38347 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-12 chr18 58659565 58659816 + 2.60953805094651 NA exon (NM_025478, exon 1 of 5) exon (NM_025478, exon 1 of 5) 208 NM_025478 66307 Mm.182574 NM_025478 ENSMUSG00000024601 Isoc1 2610034N03Rik isochorismatase domain containing 1 protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651 chr1 75179678 75179982 + 2.60953805094651 NA exon (NM_023732, exon 1 of 19) exon (NM_023732, exon 1 of 19) 562 NM_023732 74104 Mm.28663 NM_023732 ENSMUSG00000026198 Abcb6 1200005B17Rik ATP-binding cassette, sub-family B (MDR/TAP), member 6 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-22 chr7 96707293 96707742 + 2.60953805094651 NA intron (NM_011858, intron 8 of 32) intron (NM_011858, intron 8 of 32) 94032 NR_045874 791381 Mm.402112 NR_045874 ENSMUSG00000053049 Gm15413 - predicted gene 15413 ncRNA unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-7 chr7 125681698 125682015 + 2.60953805094651 NA intron (NM_207239, intron 6 of 36) intron (NM_207239, intron 6 of 36) 25832 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-6 chr18 8868930 8869305 + 2.60953805094651 NA Intergenic Intergenic -343739 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-17 chr4 151632341 151632699 + 2.60953805094651 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 229248 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-23 chr8 64626893 64627182 + 2.60953805094651 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 66072 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-3 chr12 10328153 10328583 + 2.60953805094651 NA Intergenic B4|SINE|B4 -41603 NM_027588 70881 Mm.272843 NM_027588 ENSMUSG00000020622 Nt5c1b 4921514H13Rik|AIRP|CN-IB|cN1B 5'-nucleotidase, cytosolic IB protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-30 chrX 133897955 133898252 + 2.60953805094651 NA intron (NM_019656, intron 1 of 7) intron (NM_019656, intron 1 of 7) 326 NM_019656 56496 Mm.46701 NM_019656 ENSMUSG00000067377 Tspan6 6720473L21Rik|AI316786|T245|TSPAN-6|Tm4sf|Tm4sf6 tetraspanin 6 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-24 chr8 75082439 75082893 + 2.60953805094651 NA Intergenic Intergenic -10952 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-5 chr16 19946248 19946505 + 2.60953805094651 NA TTS (NM_183390) TTS (NM_183390) 36673 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-28 chr9 23064492 23064857 + 2.60953805094651 NA Intergenic Intergenic -158402 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651 chr1 73956571 73956857 + 2.60953805094651 NA intron (NM_001289895, intron 18 of 32) intron (NM_001289895, intron 18 of 32) -92248 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-15 chr4 44233095 44233429 + 2.60953805094651 NA Intergenic MIR3|SINE|MIR -11995 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-29 chr9 102842459 102842778 + 2.60953805094651 NA intron (NM_001284258, intron 1 of 13) intron (NM_001284258, intron 1 of 13) 7698 NM_001284258 20187 Mm.335391 NM_013649 ENSMUSG00000032547 Ryk AW536699|ERK-3|Vik receptor-like tyrosine kinase protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-26 chr8 126532127 126532491 + 2.60953805094651 NA Intergenic B4|SINE|B4 -57244 NM_001159907 212728 Mm.482479 NM_001159907 ENSMUSG00000090290 Tarbp1 Gm17296|Gm179 TAR RNA binding protein 1 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-3 chr11 5015965 5016164 + 2.60953805094651 NA intron (NM_001243043, intron 4 of 22) intron (NM_001243043, intron 4 of 22) 29240 NM_001355660 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-21 chr7 88430503 88430837 + 2.60953805094651 NA intron (NM_028238, intron 1 of 2) intron (NM_028238, intron 1 of 2) 397 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-16 chr4 150703590 150704014 + 2.60953805094651 NA Intergenic Intergenic -51628 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-7 chr14 70096363 70096763 + 2.60953805094651 NA Intergenic Intergenic -3530 NM_021328 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak2_4_19_-2.2581211927692_3.19286749850276_2.60953805094651-4 chr12 79612957 79613251 + 2.60953805094651 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 311629 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak1_22_4_1.92798018648214_3.28591818812843_2.60953805094651-11 chr17 84150325 84150656 + 2.60953805094651 NA Intergenic Intergenic 37457 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_47_16_1.21635782562167_4.69564175406117_2.60849961611298 chr14 105894605 105895157 + 2.60849961611298 NA intron (NM_011897, intron 1 of 1) intron (NM_011897, intron 1 of 1) 1938 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding unique_peak1_47_16_1.21635782562167_4.69564175406117_2.60849961611298-2 chr16 10963900 10964733 + 2.60849961611298 NA intron (NM_019980, intron 2 of 3) intron (NM_019980, intron 2 of 3) 28805 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak1_47_16_1.21635782562167_4.69564175406117_2.60849961611298-3 chr9 33853004 33853843 + 2.60849961611298 NA Intergenic Intergenic -188948 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik TH-cre|Tg(Th-cre)1Tmd RIKEN cDNA 7630403G23 gene ncRNA unique_peak1_48_16_1.24589530211572_4.7104104923082_2.60849961611298-2 chr12 80232512 80233170 + 2.60849961611298 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 27530 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_48_16_1.24589530211572_4.7104104923082_2.60849961611298 chr1 36064434 36065000 + 2.60849961611298 NA Intergenic Intergenic -3683 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_47_16_1.21635782562167_4.69564175406117_2.60849961611298 chr11 59458415 59458960 + 2.60849961611298 NA TTS (NR_037992) TTS (NR_037992) 8642 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak1_48_16_1.24589530211572_4.7104104923082_2.60849961611298 chr15 99343251 99343602 + 2.60849961611298 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 27056 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding unique_peak1_47_16_1.21635782562167_4.69564175406117_2.60849961611298-4 chr9 108991178 108991625 + 2.60849961611298 NA promoter-TSS (NM_173019) promoter-TSS (NM_173019) -501 NM_173019 270198 Mm.132391 NM_173019 ENSMUSG00000025648 Pfkfb4 C230090D14 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 protein-coding common_peak2_85_114_-0.706302500308186_6.49233880079028_2.60808561743764 chr11 95088213 95089404 + 2.60808561743764 NA Intergenic Intergenic -11997 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_112_53_0.775435199496783_6.14260510191186_2.60712024750284 chr5 150664910 150665561 + 2.60712024750284 NA intron (NM_001362416, intron 1 of 7) CpG 377 NM_001362416 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|Gm38758|zag1 NEDD4 binding protein 2-like 2 protein-coding common_peak1_112_53_0.775435199496783_6.14260510191186_2.60712024750284 chr6 37431639 37432674 + 2.60712024750284 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 9992 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_63_92_-0.823228726036723_6.12754444808967_2.60712024750284 chr6 6577945 6578587 + 2.60712024750284 NA intron (NM_009169, intron 1 of 2) intron (NM_009169, intron 1 of 2) 392 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Sem1 DSS1|Shfdg1|Shfg|Shfm1 SEM1, 26S proteasome complex subunit protein-coding common_peak1_31_55_-1.08436985741305_5.26516999335108_2.60642808470051 chr1 132127996 132128502 + 2.60642808470051 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 11436 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak1_66_26_1.02666551547692_5.26822025990193_2.6064280847005 chr7 74280743 74281418 + 2.6064280847005 NA TTS (NM_023908) TTS (NM_023908) -267398 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak1_66_26_1.02666551547692_5.26822025990193_2.6064280847005-2 chr8 124278022 124278575 + 2.6064280847005 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 46904 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_127_63_0.708875105498064_6.35443755274903_2.605440955187 chr8 117259802 117261097 + 2.605440955187 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 3430 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_184_213_-0.504959305736315_7.48898733353299_2.60541934281653 chr1 91053467 91055991 + 2.60541934281653 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 1285 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_141_171_-0.56869899256861_7.14191525841779_2.60399601595159 chr7 145107917 145110360 + 2.60399601595159 NA Intergenic Intergenic 98981 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak1_97_44_0.834450067463136_5.90907813006124_2.60357722262819 chr18 9212300 9213513 + 2.60357722262819 NA promoter-TSS (NM_008058) promoter-TSS (NM_008058) 50 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak1_97_44_0.834450067463136_5.90907813006124_2.60357722262819-2 chr3 8923159 8924329 + 2.60357722262819 NA exon (NM_025434, exon 1 of 3) exon (NM_025434, exon 1 of 3) 113 NM_025434 66230 Mm.38460 NM_025434 ENSMUSG00000040269 Mrps28 1500012D08Rik|AW061224 mitochondrial ribosomal protein S28 protein-coding common_peak1_106_50_0.779740695057663_6.06229568950033_2.60283083993854 chr3 88913450 88914589 + 2.60283083993854 NA promoter-TSS (NM_144898) promoter-TSS (NM_144898) -69 NM_144898 229524 Mm.440405 NM_144898 ENSMUSG00000068922 Msto1 BC008103|mst misato 1, mitochondrial distribution and morphology regulator protein-coding common_peak1_106_50_0.779740695057663_6.06229568950033_2.60283083993854-2 chr3 109026094 109027527 + 2.60283083993854 NA intron (NM_001163567, intron 1 of 10) intron (NM_001163567, intron 1 of 10) 797 NM_001163567 329739 Mm.69013 NM_001163567 ENSMUSG00000040339 Fam102b 1600010D10Rik|B430201A12Rik family with sequence similarity 102, member B protein-coding common_peak2_56_84_-0.8593918793651_5.97969499645515_2.6014790489172 chr11 70192860 70193505 + 2.6014790489172 NA Intergenic Intergenic -20728 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_145_74_0.668541765496802_6.56308957324428_2.60049418611543 chr11 8450734 8451628 + 2.60049418611543 NA exon (NM_001083587, exon 22 of 31) exon (NM_001083587, exon 22 of 31) 213354 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_89_119_-0.70257742775518_6.55560188173093_2.60049418611543 chr10 62650551 62651249 + 2.60049418611543 NA intron (NM_001358819, intron 1 of 15) CpG 318 NM_001358819 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak1_145_74_0.668541765496802_6.56308957324428_2.60049418611543-2 chr8 61755576 61756981 + 2.60049418611543 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 3820 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-3 chr12 16869402 16869636 + 2.59995804677862 NA Intergenic Intergenic -25459 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-5 chr15 78806957 78807158 + 2.59995804677862 NA Intergenic Intergenic -4015 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-17 chr3 108909306 108909710 + 2.59995804677862 NA intron (NM_025845, intron 1 of 5) intron (NM_025845, intron 1 of 5) 2221 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-20 chr4 47258605 47259004 + 2.59995804677862 NA exon (NM_009928, exon 8 of 40) exon (NM_009928, exon 8 of 40) 50792 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding common_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862 chr5 125252396 125252605 + 2.59995804677862 NA Intergenic Intergenic -73286 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-6 chr16 13366724 13367064 + 2.59995804677862 NA intron (NM_153588, intron 1 of 14) intron (NM_153588, intron 1 of 14) 8473 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-19 chr3 144576689 144577160 + 2.59995804677862 NA intron (NM_053102, intron 1 of 4) MER58B|DNA|hAT-Charlie 6497 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-12 chr19 55746798 55747324 + 2.59995804677862 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 5251 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-6 chr4 155215285 155215635 + 2.59995804677862 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 7075 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-3 chr14 73253679 73254188 + 2.59995804677862 NA intron (NM_009029, intron 17 of 26) intron (NM_009029, intron 17 of 26) 16042 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-12 chr7 108942078 108942409 + 2.59995804677862 NA TTS (NM_025344) TTS (NM_025344) 7828 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862 chr3 81060397 81061011 + 2.59995804677862 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 24288 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-7 chr2 101966519 101966936 + 2.59995804677862 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 80465 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-5 chr2 50356323 50356664 + 2.59995804677862 NA intron (NR_154590, intron 1 of 6) intron (NR_154590, intron 1 of 6) 1468 NR_154590 102634280 NR_154590 Gm48908 - predicted gene 48908 ncRNA unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-22 chr6 34606844 34607061 + 2.59995804677862 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 8448 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-7 chr5 31627529 31627805 + 2.59995804677862 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 13716 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-5 chr15 73617145 73617360 + 2.59995804677862 NA promoter-TSS (NM_001357747) promoter-TSS (NM_001357747) 72 NM_001357747 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-8 chr16 92654315 92654781 + 2.59995804677862 NA intron (NM_001111023, intron 3 of 5) intron (NM_001111023, intron 3 of 5) 42781 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-14 chr3 7513698 7514171 + 2.59995804677862 NA intron (NM_173181, intron 1 of 8) intron (NM_173181, intron 1 of 8) 10508 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-16 chr3 95356677 95356864 + 2.59995804677862 NA intron (NM_001163642, intron 1 of 21) intron (NM_001163642, intron 1 of 21) 432 NM_001163641 84505 Mm.490259 NM_018877 ENSMUSG00000015697 Setdb1 AU022152|ESET|KMT1E|mKIAA0067 SET domain, bifurcated 1 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-9 chr4 59358271 59358924 + 2.59995804677862 NA intron (NM_001163288, intron 10 of 16) intron (NM_001163288, intron 10 of 16) 80036 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-2 chr14 21592487 21592832 + 2.59995804677862 NA intron (NM_017479, intron 2 of 16) ID_B1|SINE|B4 92874 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-8 chr3 27637184 27637531 + 2.59995804677862 NA intron (NM_001356953, intron 3 of 26) intron (NM_001356953, intron 3 of 26) -52362 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-11 chr17 87203486 87203968 + 2.59995804677862 NA Intergenic Intergenic -8785 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-4 chr10 99308630 99308872 + 2.59995804677862 NA Intergenic Intergenic 45520 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-4 chr15 62253336 62253574 + 2.59995804677862 NA intron (NR_132747, intron 4 of 4) intron (NR_132747, intron 4 of 4) -34004 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-10 chr17 80710939 80711371 + 2.59995804677862 NA intron (NM_001360278, intron 1 of 33) intron (NM_001360278, intron 1 of 33) 16870 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-2 chr1 82793565 82793965 + 2.59995804677862 NA Intergenic Intergenic -25309 NM_025453 66261 Mm.46325 NM_025453 ENSMUSG00000026149 Tm4sf20 1810018L02Rik transmembrane 4 L six family member 20 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-9 chr16 93192978 93193283 + 2.59995804677862 NA Intergenic Intergenic 160059 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862 chr1 36308440 36308736 + 2.59995804677862 NA intron (NM_001290727, intron 1 of 5) intron (NM_001290727, intron 1 of 5) 855 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-24 chr8 75095474 75095882 + 2.59995804677862 NA intron (NM_010442, intron 1 of 4) intron (NM_010442, intron 1 of 4) 2060 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862 chr1 89603569 89603946 + 2.59995804677862 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 80135 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-2 chr7 141339003 141339218 + 2.59995804677862 NA promoter-TSS (NM_001282073) promoter-TSS (NM_001282073) 108 NM_133191 98845 Mm.27451 NM_133191 ENSMUSG00000025504 Eps8l2 AI042819|AW545405|Eps8r2 EPS8-like 2 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862 chr1 34041308 34041728 + 2.59995804677862 NA intron (NM_134448, intron 1 of 97) intron (NM_134448, intron 1 of 97) 29693 NM_134448 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-3 chr1 135022957 135023154 + 2.59995804677862 NA intron (NM_001033409, intron 5 of 17) intron (NM_001033409, intron 5 of 17) 60490 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-10 chr4 59892205 59892637 + 2.59995804677862 NA intron (NM_172468, intron 6 of 8) intron (NM_172468, intron 6 of 8) 22635 NM_021053 30936 Mm.284433 NM_021053 ENSMUSG00000028386 Slc46a2 5430429N04Rik|Ly110|TSO-1C12|Tscot solute carrier family 46, member 2 protein-coding unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-2 chr1 182058298 182058588 + 2.59995804677862 NA Intergenic Intergenic -38463 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-7 chr16 92057725 92058154 + 2.59995804677862 NA promoter-TSS (NM_017391) promoter-TSS (NM_017391) -383 NM_017391 53881 Mm.217354 NM_017391 ENSMUSG00000089774 Slc5a3 AA623876|BF642829|Smit1 solute carrier family 5 (inositol transporters), member 3 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-18 chr3 135522486 135522697 + 2.59995804677862 NA intron (NM_027288, intron 5 of 16) intron (NM_027288, intron 5 of 16) 36980 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-6 chr19 18715485 18715745 + 2.59995804677862 NA intron (NM_177640, intron 1 of 1) intron (NM_177640, intron 1 of 1) 2379 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-8 chr8 121949742 121949980 + 2.59995804677862 NA promoter-TSS (NM_001110100) promoter-TSS (NM_001110100) -631 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-13 chr8 14602017 14602401 + 2.59995804677862 NA intron (NM_172910, intron 4 of 15) intron (NM_172910, intron 4 of 15) -286327 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-23 chr7 45570515 45570774 + 2.59995804677862 NA promoter-TSS (NM_001243052) promoter-TSS (NM_001243052) 491 NM_009737 12036 Mm.24210 NM_009737 ENSMUSG00000030826 Bcat2 Bcat(m)|Bcat-2|Eca40 branched chain aminotransferase 2, mitochondrial protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-13 chr2 156735224 156735466 + 2.59995804677862 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 14066 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding unique_peak1_25_5_1.84057567373396_3.50525033758813_2.59995804677862-11 chr5 63953825 63954130 + 2.59995804677862 NA intron (NM_145923, intron 1 of 6) intron (NM_145923, intron 1 of 6) 14920 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-15 chr3 30757946 30758405 + 2.59995804677862 NA intron (NM_029489, intron 5 of 7) intron (NM_029489, intron 5 of 7) 11882 NM_029489 75953 Mm.308084 NM_029489 ENSMUSG00000051860 Samd7 4930597A01Rik sterile alpha motif domain containing 7 protein-coding unique_peak1_24_5_1.7843913410044_3.47715817122335_2.59995804677862-21 chr5 91279264 91279541 + 2.59995804677862 NA intron (NR_040428, intron 3 of 5) intron (NR_040428, intron 3 of 5) 3674 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA unique_peak2_5_21_-2.13444601304556_3.39220861211452_2.59995804677862-4 chr19 6057320 6057611 + 2.59995804677862 NA promoter-TSS (NM_001160239) promoter-TSS (NM_001160239) 286 NM_026246 18120 Mm.181290 NM_026246 ENSMUSG00000007338 Mrpl49 4833419D18Rik|Nof1 mitochondrial ribosomal protein L49 protein-coding common_peak1_286_168_0.464684201319138_7.63322153694175_2.59905376523455 chr19 10947269 10949202 + 2.59905376523455 NA intron (NM_023731, intron 1 of 3) intron (NM_023731, intron 1 of 3) 1031 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak2_109_139_-0.637505695167272_6.81053016936133_2.59545663173978 chr12 86103822 86105561 + 2.59545663173978 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 22130 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_170_90_0.615985039228117_6.81578715981276_2.59545663173978 chr4 41135620 41136885 + 2.59545663173978 NA intron (NM_026275, intron 1 of 4) CpG 231 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding common_peak1_28_52_-1.14595245361269_5.15494422775685_2.59472032287453 chr6 38353920 38354233 + 2.59472032287453 NA exon (NM_001347122, exon 1 of 13) exon (NM_001347122, exon 1 of 13) 527 NM_001347122 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding unique_peak1_62_24_1.04951410847211_5.16861324401078_2.59472032287452 chr2 117471216 117472019 + 2.59472032287452 NA Intergenic Intergenic -128740 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_123_60_0.732657222416651_6.29706594877121_2.59342703150263 chr5 29842683 29844175 + 2.59342703150263 NA Intergenic L2a|LINE|L2 -107493 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak1_122_60_0.721057832265006_6.29126625369539_2.59342703150263 chr8 111716995 111718435 + 2.59342703150263 NA intron (NM_001198839, intron 2 of 6) (CAGA)n|Simple_repeat|Simple_repeat 14421 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_123_60_0.732657222416651_6.29706594877121_2.59342703150263 chr11 59663477 59664471 + 2.59342703150263 NA intron (NM_201245, intron 1 of 22) intron (NM_201245, intron 1 of 22) 1479 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_21_43_-1.27320123646699_4.8228310004038_2.59278847729177-3 chr3 32615890 32616642 + 2.59278847729177 NA promoter-TSS (NM_001348062) promoter-TSS (NM_001348062) -99 NM_001348062 14696 Mm.139192 NM_013531 ENSMUSG00000027669 Gnb4 6720453A21Rik|G(beta)4 guanine nucleotide binding protein (G protein), beta 4 protein-coding unique_peak2_21_43_-1.27320123646699_4.8228310004038_2.59278847729177-3 chr13 52083346 52083853 + 2.59278847729177 NA Intergenic Intergenic -13142 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_21_43_-1.27320123646699_4.8228310004038_2.59278847729177 chr11 74840701 74841599 + 2.59278847729177 NA intron (NM_010813, intron 4 of 5) intron (NM_010813, intron 4 of 5) 10226 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_21_43_-1.27320123646699_4.8228310004038_2.59278847729177-2 chr11 70646465 70646980 + 2.59278847729177 NA promoter-TSS (NM_027445) promoter-TSS (NM_027445) 317 NM_024211 67863 Mm.296082 NM_024211 ENSMUSG00000014606 Slc25a11 2310022P18Rik|2oxoc solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 protein-coding common_peak2_21_43_-1.27320123646699_4.8228310004038_2.59278847729177 chr11 18589913 18590385 + 2.59278847729177 NA Intergenic Intergenic 428820 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak2_21_43_-1.27320123646699_4.8228310004038_2.59278847729177-2 chr12 110207940 110208519 + 2.59278847729177 NA Intergenic Intergenic -50156 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak2_51_18_1.17055568143828_4.83320535416273_2.59278847729176 chr8 68734986 68735534 + 2.59278847729176 NA promoter-TSS (NM_001252623) promoter-TSS (NM_001252623) -114 NM_172753 234356 Mm.334569 NM_172753 ENSMUSG00000036356 Csgalnact1 4732435N03Rik|CSGalNAcT-1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding common_peak1_51_18_1.17055568143828_4.83320535416273_2.59278847729176 chr4 89508423 89509029 + 2.59278847729176 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -179472 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak1_51_18_1.17055568143828_4.83320535416273_2.59278847729176 chr11 75551341 75552041 + 2.59278847729176 NA TTS (NR_039553) TTS (NR_039553) 262 NR_039553 100628624 NR_039553 ENSMUSG00000093100 Mir3971 mmu-mir-3971|mu-mir-3971 microRNA 3971 ncRNA common_peak1_134_67_0.697685928830455_6.43630580566557_2.592278230509 chr5 140610494 140611632 + 2.592278230509 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 3722 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_83_36_0.896026350817186_5.65746654103754_2.59178042653149 chr9 58440708 58441614 + 2.59178042653149 NA Intergenic Intergenic -14012 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak2_74_31_0.943134464379763_5.47156723218988_2.58840263465244 chr9 58440734 58441467 + 2.58840263465244 NA Intergenic Intergenic -14073 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak1_75_31_0.962108474971902_5.48105423748595_2.58840263465244-2 chr17 24849455 24850265 + 2.58840263465244 NA promoter-TSS (NM_024284) promoter-TSS (NM_024284) 442 NM_023480 68636 Mm.347964 NM_023480 ENSMUSG00000045316 Fahd1 1110025H10Rik|AV002085 fumarylacetoacetate hydrolase domain containing 1 protein-coding common_peak1_75_31_0.962108474971902_5.48105423748595_2.58840263465244 chr12 105032840 105033744 + 2.58840263465244 NA intron (NM_028419, intron 1 of 1) intron (NM_028419, intron 1 of 1) 674 NM_028419 73046 Mm.29128 NM_028419 ENSMUSG00000021102 Glrx5 - glutaredoxin 5 protein-coding common_peak2_26_49_-1.16425435930132_5.06172901012406_2.58772382823801 chr11 121228963 121229681 + 2.58772382823801 NA promoter-TSS (NM_144832) promoter-TSS (NM_144832) -13 NM_001252548 217370 Mm.27182 NM_144832 ENSMUSG00000039294 BC017643 - cDNA sequence BC017643 protein-coding common_peak1_59_22_1.09991560956887_5.07351976084145_2.58772382823801 chr19 25406894 25407493 + 2.58772382823801 NA intron (NM_181404, intron 4 of 13) intron (NM_181404, intron 4 of 13) -98513 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding unique_peak1_55_20_1.13232669143992_4.95848076849872_2.58657013435546 chr11 87442968 87443242 + 2.58657013435546 NA intron (NM_001199293, intron 2 of 30) CpG 15514 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_55_20_1.13232669143992_4.95848076849872_2.58657013435546 chr11 108268480 108269027 + 2.58657013435546 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 75135 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_55_20_1.13232669143992_4.95848076849872_2.58657013435546-2 chr14 56777647 56778144 + 2.58657013435546 NA exon (NM_025682, exon 1 of 9) exon (NM_025682, exon 1 of 9) 423 NM_001360420 66645 Mm.20129 NM_025682 ENSMUSG00000021938 Pspc1 5730470C09Rik|AI327109|AI449052|PSP1 paraspeckle protein 1 protein-coding unique_peak1_55_20_1.13232669143992_4.95848076849872_2.58657013435546-2 chr8 122991902 122992596 + 2.58657013435546 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 50035 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_23_46_-1.24371320523239_4.93273224906144_2.58657013435545 chr11 16590820 16591508 + 2.58657013435545 NA Intergenic Intergenic -82680 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-20 chr15 41832393 41832590 + 2.58603100924543 NA intron (NM_001130164, intron 1 of 5) intron (NM_001130164, intron 1 of 5) 1533 NM_001130164 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-16 chr3 119510967 119511380 + 2.58603100924543 NA Intergenic Intergenic 272215 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-19 chr9 49873705 49873959 + 2.58603100924543 NA Intergenic Intergenic -74439 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-4 chr11 57945747 57945946 + 2.58603100924543 NA Intergenic Intergenic -63218 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-15 chr5 138171595 138171801 + 2.58603100924543 NA promoter-TSS (NM_021392) promoter-TSS (NM_021392) 185 NM_008568 17220 Mm.378965 NM_008568 ENSMUSG00000029730 Mcm7 AI747533|Mcmd7|mCDC47 minichromosome maintenance complex component 7 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-69 chr9 80188616 80188900 + 2.58603100924543 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 23724 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-11 chr15 100206864 100207147 + 2.58603100924543 NA intron (NM_172819, intron 29 of 32) intron (NM_172819, intron 29 of 32) -18969 NR_037311 100499528 NR_037311 ENSMUSG00000092752 Mir3473a Mir3473|mir-3473a|mmu-mir-3473|mmu-mir-3473a microRNA 3473a ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-21 chr15 51977299 51977535 + 2.58603100924543 NA intron (NM_009009, intron 3 of 13) intron (NM_009009, intron 3 of 13) 14343 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543 chr1 91819030 91819280 + 2.58603100924543 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 17694 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-18 chr6 134932831 134933089 + 2.58603100924543 NA intron (NR_037956, intron 1 of 1) intron (NR_037956, intron 1 of 1) 3868 NR_037955 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-3 chr11 52168256 52168509 + 2.58603100924543 NA Intergenic Intergenic -10475 NR_034155 257871 Mm.253576 NR_034155 Olfr1372-ps1 GA_x5J8B7TR6JS-3-632|MOR256-54P|NP_TR6JSE50FPA olfactory receptor 1372, pseudogene 1 pseudo unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-57 chr7 49336402 49336705 + 2.58603100924543 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 90364 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-54 chr6 5142570 5142837 + 2.58603100924543 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 51243 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543 chr1 4745301 4745601 + 2.58603100924543 NA Intergenic Intergenic 40275 NM_001177658 27395 Mm.182927 NM_025300 ENSMUSG00000033845 Mrpl15 HSPC145|MRP-L7|Rpml7 mitochondrial ribosomal protein L15 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-28 chr17 14287058 14287342 + 2.58603100924543 NA intron (NM_022315, intron 1 of 12) intron (NM_022315, intron 1 of 12) 7694 NM_022315 64074 Mm.30162 NM_022315 ENSMUSG00000023886 Smoc2 1700056C05Rik|5430426J21Rik|Smoc2l SPARC related modular calcium binding 2 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-8 chr15 97102693 97102904 + 2.58603100924543 NA Intergenic Intergenic -46842 NM_027052 69354 Mm.250980 NM_027052 ENSMUSG00000022464 Slc38a4 1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3 solute carrier family 38, member 4 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-4 chr14 25616895 25617230 + 2.58603100924543 NA intron (NM_183208, intron 6 of 23) intron (NM_183208, intron 6 of 23) 13549 NM_001309430 100188919 Mm.473810 NM_001309430 Gm45915 Israa predicted gene, 45915 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-47 chr4 141280230 141280470 + 2.58603100924543 NA TTS (NR_151527) TTS (NR_151527) 1911 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-12 chr2 49770697 49770958 + 2.58603100924543 NA intron (NM_008449, intron 25 of 25) intron (NM_008449, intron 25 of 25) -16859 NM_027990 71897 Mm.41381 NM_027990 ENSMUSG00000026765 Lypd6b 2310010M24Rik|AW049525 LY6/PLAUR domain containing 6B protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-34 chr19 24676407 24676704 + 2.58603100924543 NA intron (NM_183160, intron 1 of 1) intron (NM_183160, intron 1 of 1) 2547 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-23 chr15 68164999 68165212 + 2.58603100924543 NA intron (NM_198644, intron 10 of 15) intron (NM_198644, intron 10 of 15) 93751 NR_152182 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-61 chr8 26689883 26690116 + 2.58603100924543 NA Intergenic Intergenic 134424 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-2 chr11 18724062 18724353 + 2.58603100924543 NA Intergenic Intergenic 294762 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-44 chr3 38106055 38106367 + 2.58603100924543 NA Intergenic Intergenic 101908 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-71 chrX 136306714 136306970 + 2.58603100924543 NA Intergenic Intergenic 36589 NM_001110234 12070 Mm.90787 NM_009750 ENSMUSG00000046432 Bex3 AL033356|DXWsu67e|Gcap27|Nade|Ngfrap1 brain expressed X-linked 3 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-2 chr10 23458656 23459021 + 2.58603100924543 NA Intergenic Intergenic -108895 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-16 chr5 146700891 146701194 + 2.58603100924543 NA Intergenic Intergenic 93914 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-37 chr19 53038799 53039038 + 2.58603100924543 NA promoter-TSS (NM_133216) promoter-TSS (NM_133216) -264 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-68 chr9 70544028 70544276 + 2.58603100924543 NA intron (NR_152142, intron 2 of 19) intron (NR_152142, intron 2 of 19) 1437 NM_025690 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-36 chr19 44754294 44754568 + 2.58603100924543 NA Intergenic Intergenic -2963 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-7 chr13 41673513 41673739 + 2.58603100924543 NA Intergenic Intergenic 67410 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-12 chr3 97964879 97965135 + 2.58603100924543 NA intron (NM_001033779, intron 1 of 1) AmnSINE1|SINE|Deu 34834 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-7 chr11 72450049 72450421 + 2.58603100924543 NA intron (NM_016776, intron 24 of 25) intron (NM_016776, intron 24 of 25) 8908 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-33 chr18 82520829 82521153 + 2.58603100924543 NA intron (NM_001025245, intron 2 of 3) AT_rich|Low_complexity|Low_complexity -33472 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-29 chr17 56030857 56031059 + 2.58603100924543 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 5679 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-60 chr7 142428842 142429071 + 2.58603100924543 NA Intergenic Intergenic -5894 NR_153437 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-3 chr11 50155108 50155349 + 2.58603100924543 NA intron (NM_029745, intron 11 of 20) intron (NM_029745, intron 11 of 20) -19623 NM_026543 68067 Mm.40828 NM_026543 ENSMUSG00000020381 Mrnip 2900016G09Rik|3010026O09Rik|AI851514|AW475975 MRN complex interacting protein protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-45 chr3 66295871 66296107 + 2.58603100924543 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 848 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-11 chr13 34191148 34191445 + 2.58603100924543 NA intron (NM_001033167, intron 10 of 10) intron (NM_001033167, intron 10 of 10) 28332 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-26 chr16 45045190 45045386 + 2.58603100924543 NA Intergenic Intergenic -48723 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-18 chr14 54234566 54234895 + 2.58603100924543 NA TTS (NM_001113358) TTS (NM_001113358) 19199 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-17 chr9 21288111 21288488 + 2.58603100924543 NA promoter-TSS (NM_145416) promoter-TSS (NM_145416) -330 NM_145416 215194 Mm.290690 NM_145416 ENSMUSG00000035047 Kri1 - KRI1 homolog protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-16 chr13 113202675 113202883 + 2.58603100924543 NA Intergenic Intergenic -6880 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-42 chr2 152600957 152601150 + 2.58603100924543 NA Intergenic Intergenic -3274 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-56 chr7 45677105 45677433 + 2.58603100924543 NA TTS (NM_001271578) TTS (NM_001271578) -6753 NM_001358870 243967 Mm.291240 NM_001033356 ENSMUSG00000070564 Ntn5 Gm484 netrin 5 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-8 chr11 79752419 79752665 + 2.58603100924543 NA Intergenic Intergenic 26142 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-10 chr15 84222479 84222711 + 2.58603100924543 NA Intergenic Intergenic -9448 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-50 chr5 37365799 37366053 + 2.58603100924543 NA intron (NM_145920, intron 7 of 19) intron (NM_145920, intron 7 of 19) 27448 NM_145920 68525 Mm.25506 NM_145920 ENSMUSG00000050248 Evc2 1110017L09Rik|Lbn|limbin EvC ciliary complex subunit 2 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-59 chr7 133317998 133318399 + 2.58603100924543 NA Intergenic Intergenic 189947 NR_046279 74970 Mm.491044 NR_046279 ENSMUSG00000109816 4930483O08Rik - RIKEN cDNA 4930483O08 gene ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-19 chr15 41606462 41606760 + 2.58603100924543 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 157508 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-14 chr5 93179272 93179575 + 2.58603100924543 NA 3' UTR (NM_001347377, exon 11 of 11) 3' UTR (NM_001347377, exon 11 of 11) 27072 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-6 chr15 9139525 9139741 + 2.58603100924543 NA promoter-TSS (NM_177178) promoter-TSS (NM_177178) 821 NM_013787 27401 Mm.35584 NM_013787 ENSMUSG00000054115 Skp2 4930500A04Rik|FBXL1|FWD1|p45 S-phase kinase-associated protein 2 (p45) protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-10 chr19 28170698 28171076 + 2.58603100924543 NA Intergenic Intergenic -159721 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-63 chr8 107291739 107291936 + 2.58603100924543 NA intron (NR_039557, intron 2 of 3).3 intron (NR_039557, intron 2 of 3).3 -1633 NM_018823 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-8 chr13 63192772 63192978 + 2.58603100924543 NA intron (NM_001289926, intron 9 of 15) PB1D10|SINE|Alu -47154 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-7 chr15 38472487 38472756 + 2.58603100924543 NA Intergenic Intergenic 17926 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-27 chr16 92443905 92444223 + 2.58603100924543 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) 22105 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-31 chr18 38098621 38098841 + 2.58603100924543 NA Intergenic L2a|LINE|L2 -99762 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-14 chr13 58481946 58482142 + 2.58603100924543 NA Intergenic Intergenic -78701 NM_001301341 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-5 chr11 36000575 36000928 + 2.58603100924543 NA Intergenic Intergenic -20662 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-24 chr15 101220605 101220841 + 2.58603100924543 NA promoter-TSS (NR_045996) promoter-TSS (NR_045996) -524 NR_045996 105968 Mm.120798 NR_045996 ENSMUSG00000115944 AU021063 - expressed sequence AU021063 ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-66 chr9 63668748 63669091 + 2.58603100924543 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 66273 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-70 chr9 123000879 123001073 + 2.58603100924543 NA intron (NM_010620, intron 22 of 34) intron (NM_010620, intron 22 of 34) -20350 NM_025339 66079 Mm.482265 NM_025339 ENSMUSG00000066233 Tmem42 0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e transmembrane protein 42 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-62 chr8 46396896 46397205 + 2.58603100924543 NA Intergenic Intergenic -73987 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-9 chr13 104562693 104563020 + 2.58603100924543 NA Intergenic Intergenic 254097 NM_026072 67285 Mm.235398 NM_026072 ENSMUSG00000021715 Cwc27 3110009E13Rik|NY-CO-10|Sdccag10 CWC27 spliceosome-associated protein protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-38 chr2 13408265 13408562 + 2.58603100924543 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 83463 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-43 chr2 156725484 156725759 + 2.58603100924543 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 4342 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-9 chr11 121725645 121725979 + 2.58603100924543 NA Intergenic Intergenic 23385 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-6 chr12 104414572 104414841 + 2.58603100924543 NA TTS (NM_009252) TTS (NM_009252) 7998 NM_009252 20716 Mm.482074 NM_009252 ENSMUSG00000021091 Serpina3n Spi2-2|Spi2.2|Spi2/eb.4 serine (or cysteine) peptidase inhibitor, clade A, member 3N protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-15 chr13 104470317 104470541 + 2.58603100924543 NA exon (NM_001081020, exon 22 of 25) exon (NM_001081020, exon 22 of 25) 182594 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-65 chr9 57639234 57639474 + 2.58603100924543 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 6299 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-11 chr2 32929091 32929337 + 2.58603100924543 NA intron (NM_199302, intron 22 of 24) MIR|SINE|MIR 32041 NM_199302 227738 Mm.248037 NM_199302 ENSMUSG00000026792 Lrsam1 - leucine rich repeat and sterile alpha motif containing 1 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-5 chr12 18514802 18515046 + 2.58603100924543 NA exon (NM_001201330, exon 1 of 4) exon (NM_001201330, exon 1 of 4) 414 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-40 chr2 32867192 32867413 + 2.58603100924543 NA Intergenic Intergenic -8832 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-6 chr11 54754583 54754949 + 2.58603100924543 NA intron (NM_178626, intron 2 of 5) intron (NM_178626, intron 2 of 5) 32937 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-51 chr5 101891675 101891941 + 2.58603100924543 NA intron (NM_172882, intron 36 of 66) intron (NM_172882, intron 36 of 66) 126678 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-10 chr12 104802039 104802329 + 2.58603100924543 NA intron (NM_001040682, intron 2 of 12) intron (NM_001040682, intron 2 of 12) -50232 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-17 chr14 31667841 31668056 + 2.58603100924543 NA 3' UTR (NM_025295, exon 4 of 4) 3' UTR (NM_025295, exon 4 of 4) 26891 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-30 chr18 33661120 33661528 + 2.58603100924543 NA Intergenic Intergenic -133568 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-58 chr7 84367203 84367457 + 2.58603100924543 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 42708 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-55 chr7 27281621 27281898 + 2.58603100924543 NA 3' UTR (NM_010950, exon 10 of 10) 3' UTR (NM_010950, exon 10 of 10) 22998 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-64 chr8 126904510 126904876 + 2.58603100924543 NA Intergenic Intergenic 41228 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-52 chr5 136642013 136642326 + 2.58603100924543 NA Intergenic Intergenic -50977 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-41 chr2 113622869 113623078 + 2.58603100924543 NA intron (NM_001285459, intron 12 of 16) intron (NM_001285459, intron 12 of 16) -62117 NM_001287818 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-22 chr15 56764882 56765093 + 2.58603100924543 NA Intergenic Intergenic -70441 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543 chr1 83084525 83084834 + 2.58603100924543 NA Intergenic Intergenic 23749 NM_027778 71386 Mm.389133 NM_027778 ENSMUSG00000101315 Krtap28-13 5530401N06Rik keratin associated protein 28-13 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-39 chr2 32342894 32343144 + 2.58603100924543 NA intron (NM_010065, intron 1 of 20) intron (NM_010065, intron 1 of 20) 10310 NM_001301737 13429 Mm.44736 NM_010065 ENSMUSG00000026825 Dnm1 AI838169|Dnm|Ftfl|mKIAA4093 dynamin 1 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-12 chr13 41359272 41359561 + 2.58603100924543 NA promoter-TSS (NM_017464) promoter-TSS (NM_017464) -415 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-48 chr5 30654852 30655220 + 2.58603100924543 NA intron (NM_175675, intron 2 of 5) intron (NM_175675, intron 2 of 5) 7097 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-32 chr18 69345267 69345598 + 2.58603100924543 NA promoter-TSS (NM_001083967) promoter-TSS (NM_001083967) -289 NM_001083967 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-9 chr16 23611032 23611282 + 2.58603100924543 NA intron (NM_023386, intron 1 of 1) intron (NM_023386, intron 1 of 1) 1238 NM_023386 67775 Mm.475107 NM_023386 ENSMUSG00000033355 Rtp4 5830458K16Rik|Ifrg28 receptor transporter protein 4 protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-13 chr2 118048641 118049002 + 2.58603100924543 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 62381 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-3 chr10 125975716 125975954 + 2.58603100924543 NA intron (NM_177152, intron 3 of 18) intron (NM_177152, intron 3 of 18) 9616 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-5 chr14 68051340 68051602 + 2.58603100924543 NA Intergenic Intergenic -32392 NM_010910 18039 Mm.1956 NM_010910 ENSMUSG00000022055 Nefl AI847934|CMT2E|NF-L|NF68|Nfl neurofilament, light polypeptide protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-49 chr5 34986732 34986929 + 2.58603100924543 NA intron (NM_173402, intron 3 of 16) intron (NM_173402, intron 3 of 16) -12248 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-13 chr5 92204294 92204717 + 2.58603100924543 NA Intergenic Intergenic 10903 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-35 chr19 32760316 32760527 + 2.58603100924543 NA intron (NM_008960, intron 1 of 8) intron (NM_008960, intron 1 of 8) 2844 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-15 chr3 98054549 98054891 + 2.58603100924543 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 41182 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-53 chr5 146913678 146913933 + 2.58603100924543 NA Intergenic Intergenic -34852 NM_025652 66596 Mm.196528 NM_025652 ENSMUSG00000016503 Gtf3a 2010015D03Rik|2610111I01Rik|5330403M05Rik general transcription factor III A protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-13 chr13 52712364 52712681 + 2.58603100924543 NA Intergenic Intergenic 44683 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-67 chr9 64066791 64067066 + 2.58603100924543 NA Intergenic Intergenic -13833 NR_040743 76814 Mm.243771 NR_040743 Scarletltr 2600006L11Rik Scarletltr, erythroid developmental long intergenic non-protein coding transcript ncRNA unique_peak2_2_14_-2.57485001044354_2.61946559038675_2.58603100924543-2 chr11 49080851 49081108 + 2.58603100924543 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) 4392 NM_001271677 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-46 chr3 109159252 109159526 + 2.58603100924543 NA exon (NM_172685, exon 7 of 10) exon (NM_172685, exon 7 of 10) 36240 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-4 chr10 126987438 126987674 + 2.58603100924543 NA intron (NM_001113470, intron 1 of 7) MIR|SINE|MIR -7974 NR_029803 723962 NR_029803 ENSMUSG00000065430 Mir26a-2 Mirn26a-2|mir-26a-2 microRNA 26a-2 ncRNA unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-14 chr3 41363922 41364191 + 2.58603100924543 NA Intergenic Intergenic 129143 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak2_3_14_-2.16274059224423_2.8255202994864_2.58603100924543-17 chr3 126672258 126672594 + 2.58603100924543 NA intron (NM_001025438, intron 2 of 18) intron (NM_001025438, intron 2 of 18) 75475 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding unique_peak1_16_3_1.8168858369097_2.90844291845485_2.58603100924543-25 chr16 6897507 6897698 + 2.58603100924543 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -141768 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak2_251_276_-0.434481826948843_7.89650125257477_2.58512434065547 chr11 114850696 114853357 + 2.58512434065547 NA promoter-TSS (NM_147217) promoter-TSS (NM_147217) -4 NM_147217 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding common_peak1_371_387_-0.362737659553378_8.41854401241044_2.58389334917086 chr8 126847153 126849501 + 2.58389334917086 NA promoter-TSS (NR_151740) promoter-TSS (NR_151740) -693 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_69_97_-0.77040883114265_6.22950542854388_2.58318331625952 chr4 135352315 135353155 + 2.58318331625952 NA intron (NM_016799, intron 1 of 17) CpG 479 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak2_68_97_-0.791020940091499_6.21919937406946_2.58318331625952 chr17 28142289 28143455 + 2.58318331625952 NA intron (NM_001004366, intron 1 of 21) intron (NM_001004366, intron 1 of 21) 346 NM_001004366 268935 Mm.258491 NM_001004366 ENSMUSG00000038677 Scube3 CEGF3|D030038I21Rik signal peptide, CUB domain, EGF-like 3 protein-coding common_peak2_68_97_-0.791020940091499_6.21919937406946_2.58318331625952-2 chr8 36660953 36661933 + 2.58318331625952 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -47500 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_118_57_0.746453932209766_6.23120796123245_2.58318331625951 chr14 45464182 45465809 + 2.58318331625951 NA intron (NM_146054, intron 11 of 14) intron (NM_146054, intron 11 of 14) 65070 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak2_140_71_0.677516924513953_6.50868346369929_2.58279596435171 chr10 70094853 70095805 + 2.58279596435171 NA Intergenic Intergenic -1792 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak1_322_193_0.434931466330187_7.81737857535222_2.58199150806292 chr2 13573800 13576786 + 2.58199150806292 NA intron (NM_011701, intron 1 of 8) intron (NM_011701, intron 1 of 8) 982 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak1_46_73_-0.935792062326896_5.7415573344655_2.5780594337963 chr10 80826616 80827288 + 2.5780594337963 NA intron (NM_001301034, intron 1 of 4) CpG 256 NR_027656 100041965 Mm.328806 NR_027656 Oaz1-ps Gm1823|Gm9786|Oaz-ps ornithine decarboxylase antizyme 1, pseudogene pseudo common_peak2_110_140_-0.634809988687141_6.82214635805522_2.57528333513116 chr2 23155788 23157096 + 2.57528333513116 NA promoter-TSS (NM_025979) promoter-TSS (NM_025979) -63 NM_013771 27377 Mm.23335 NM_013771 ENSMUSG00000026775 Yme1l1 FtsH1|Ftsh YME1-like 1 (S. cerevisiae) protein-coding common_peak1_489_311_0.346447884537953_8.45862616113122_2.57503265370928 chr3 88620599 88625122 + 2.57503265370928 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 1466 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_113_54_0.761584363674697_6.16215189536201_2.57496839624365 chr3 93555219 93556078 + 2.57496839624365 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 531 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554-4 chr10 115251039 115251437 + 2.5745355257554 NA intron (NM_025706, intron 1 of 16) CpG 255 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding unique_peak1_41_13_1.30517977396178_4.45994480903849_2.5745355257554-2 chr19 60939648 60940067 + 2.5745355257554 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 50108 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554-2 chr14 120277513 120278064 + 2.5745355257554 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) 2119 NM_001360380 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak2_15_35_-1.43988495722452_4.44998252283005_2.5745355257554 chr13 54468360 54468780 + 2.5745355257554 NA exon (NM_028597, exon 1 of 6) exon (NM_028597, exon 1 of 6) 270 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 protein-coding unique_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554-6 chr17 87218975 87219624 + 2.5745355257554 NA Intergenic Intergenic -24357 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak2_15_35_-1.43988495722452_4.44998252283005_2.5745355257554-2 chr19 28377138 28377747 + 2.5745355257554 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -300782 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_15_35_-1.43988495722452_4.44998252283005_2.5745355257554 chr11 96915896 96916409 + 2.5745355257554 NA exon (NM_030248, exon 2 of 14) exon (NM_030248, exon 2 of 14) 362 NM_001308183 80280 Mm.28297 NM_030248 ENSMUSG00000018669 Cdk5rap3 1810007E24Rik|BC002318|C53|C81486|HSF-27|IC53|LZAP|MST016 CDK5 regulatory subunit associated protein 3 protein-coding unique_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554-3 chr10 99106912 99107420 + 2.5745355257554 NA promoter-TSS (NM_015737) promoter-TSS (NM_015737) 84 NR_153333 382406 Mm.440656 NM_027740 ENSMUSG00000019952 Poc1b 4933430F16Rik|Wdr51b POC1 centriolar protein B protein-coding unique_peak1_41_13_1.30517977396178_4.45994480903849_2.5745355257554-3 chr2 30875192 30875726 + 2.5745355257554 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 27838 NM_022415 64292 Mm.28768 NM_022415 ENSMUSG00000050737 Ptges 2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1 prostaglandin E synthase protein-coding common_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554 chr14 99542181 99542643 + 2.5745355257554 NA Intergenic Intergenic 243721 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak1_41_13_1.30517977396178_4.45994480903849_2.5745355257554-5 chr9 120962656 120963498 + 2.5745355257554 NA Intergenic Intergenic 7991 NR_106058 102465661 NR_106058 ENSMUSG00000106193 Mir7090 mmu-mir-7090 microRNA 7090 ncRNA unique_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554 chr10 12919720 12920002 + 2.5745355257554 NA intron (NR_038028, intron 2 of 2) intron (NR_038028, intron 2 of 2) 3266 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA unique_peak1_41_13_1.30517977396178_4.45994480903849_2.5745355257554-4 chr6 83034401 83034958 + 2.5745355257554 NA intron (NM_013586, intron 1 of 13) intron (NM_013586, intron 1 of 13) 455 NM_013586 16950 Mm.380433 NM_013586 ENSMUSG00000000693 Loxl3 Lor2|Loxl2 lysyl oxidase-like 3 protein-coding unique_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554-5 chr11 103027863 103028281 + 2.5745355257554 NA promoter-TSS (NM_008707) promoter-TSS (NM_008707) -471 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak1_41_13_1.30517977396178_4.45994480903849_2.5745355257554 chr10 93306377 93306681 + 2.5745355257554 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 4630 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_42_13_1.33888760815183_4.47679872613352_2.5745355257554-2 chr10 41449730 41450176 + 2.5745355257554 NA promoter-TSS (NM_153398) promoter-TSS (NM_153398) -405 NM_001277229 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461 chr11 50292640 50293102 + 2.57346781069461 NA promoter-TSS (NM_175334) promoter-TSS (NM_175334) -535 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding unique_peak2_11_30_-1.63626568436838_4.13606346820268_2.57346781069461-2 chr5 3301000 3301204 + 2.57346781069461 NA Intergenic Intergenic -42791 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-3 chr13 30664683 30665287 + 2.57346781069461 NA intron (NM_134068, intron 1 of 7) intron (NM_134068, intron 1 of 7) 4926 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-6 chr17 31323231 31323760 + 2.57346781069461 NA intron (NM_001242427, intron 8 of 19) intron (NM_001242427, intron 8 of 19) 27271 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-12 chr2 137703976 137704393 + 2.57346781069461 NA Intergenic Intergenic -552400 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-5 chr17 6429346 6429883 + 2.57346781069461 NA promoter-TSS (NM_009342) promoter-TSS (NM_009342) -498 NM_009342 21648 Mm.1948 NM_009342 ENSMUSG00000096255 Dynlt1b AGS2|Dynlt1|Tctex-1|Tctex1 dynein light chain Tctex-type 1B protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-15 chr9 23693952 23694366 + 2.57346781069461 NA Intergenic Intergenic -403859 NM_175678 319239 Mm.130824 NM_175678 ENSMUSG00000043659 Npsr1 9330128H10Rik|GPRA|Gpr154|MVTR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-4 chr15 25913665 25914186 + 2.57346781069461 NA intron (NM_001034851, intron 3 of 8) intron (NM_001034851, intron 3 of 8) -19627 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-8 chr17 75179442 75179938 + 2.57346781069461 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 909 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-14 chr8 60809238 60809871 + 2.57346781069461 NA Intergenic Intergenic -80839 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-7 chr17 44105288 44105756 + 2.57346781069461 NA intron (NM_001357996, intron 1 of 3) CpG 286 NM_199016 224794 Mm.255971 NM_199016 ENSMUSG00000023961 Enpp4 4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90 ectonucleotide pyrophosphatase/phosphodiesterase 4 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-10 chr19 47903175 47903494 + 2.57346781069461 NA intron (NM_001001738, intron 1 of 1) intron (NM_001001738, intron 1 of 1) 15965 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding unique_peak2_11_30_-1.63626568436838_4.13606346820268_2.57346781069461 chr1 164446120 164446561 + 2.57346781069461 NA intron (NM_009721, intron 2 of 5) intron (NM_009721, intron 2 of 5) 12015 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-13 chr4 89058364 89058858 + 2.57346781069461 NA intron (NR_033533, intron 2 of 2) intron (NR_033533, intron 2 of 2) 8304 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-2 chr11 58168118 58168547 + 2.57346781069461 NA exon (NM_172558, exon 1 of 28) exon (NM_172558, exon 1 of 28) 207 NM_172558 216766 Mm.275349 NM_172558 ENSMUSG00000037275 Gemin5 AA407055|AA407208|AI451603|BB194447|C330013N08 gem nuclear organelle associated protein 5 protein-coding unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-9 chr19 44792300 44792813 + 2.57346781069461 NA intron (NM_011037, intron 5 of 9) intron (NM_011037, intron 5 of 9) -15850 NR_105831 102466645 NR_105831 ENSMUSG00000098952 Mir6405 Gm27349|mmu-mir-6405 microRNA 6405 ncRNA unique_peak1_35_10_1.43227963003541_4.175571433655_2.57346781069461-11 chr2 24441515 24442090 + 2.57346781069461 NA intron (NM_011040, intron 4 of 11) intron (NM_011040, intron 4 of 11) 33797 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_165_87_0.621837022680377_6.77035012997749_2.57256242967171 chr8 3428091 3429839 + 2.57256242967171 NA intron (NM_133962, intron 2 of 19) intron (NM_133962, intron 2 of 19) 35957 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_211_118_0.536842332815428_7.16323892971566_2.57195164238785 chr14 65097324 65098533 + 2.57195164238785 NA intron (NM_018788, intron 1 of 6) CpG 178 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak2_101_130_-0.649811521546789_6.70851724076406_2.57168100674377-2 chr8 109868569 109869466 + 2.57168100674377 NA intron (NM_001122594, intron 1 of 18) CpG 414 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding common_peak2_101_130_-0.649811521546789_6.70851724076406_2.57168100674377 chr10 117717078 117718660 + 2.57168100674377 NA Intergenic Intergenic -7111 NM_001288586 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-28 chr13 67450891 67451084 + 2.57096726280955 NA intron (NM_177712, intron 1 of 3) B1_Mus1|SINE|Alu 637 NM_177712 238692 Mm.486478 NM_177712 ENSMUSG00000069206 Zfp874a C330011K17Rik|Rslcan15|Zfp874 zinc finger protein 874a protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-80 chr9 56555809 56556000 + 2.57096726280955 NA Intergenic Intergenic 79744 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-68 chr5 97014035 97014305 + 2.57096726280955 NA intron (NM_080708, intron 1 of 15) L1MB3|LINE|L1 16481 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-40 chr16 4469605 4469819 + 2.57096726280955 NA Intergenic Intergenic -49214 NM_009624 11515 Mm.439750 NM_009624 ENSMUSG00000005580 Adcy9 AC9|ACtp10|AW125421|D16Wsu65e|mKIAA0520 adenylate cyclase 9 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-62 chr4 57866384 57866593 + 2.57096726280955 NA intron (NM_009649, intron 2 of 2) intron (NM_009649, intron 2 of 2) 11926 NM_001035533 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-74 chr6 120180980 120181215 + 2.57096726280955 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -12726 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-22 chr11 120555373 120555612 + 2.57096726280955 NA Intergenic Intergenic -4360 NM_026814 68701 Mm.46477 NM_026814 ENSMUSG00000025129 Ppp1r27 1110033I14Rik|Dysfip1|toonin protein phosphatase 1, regulatory subunit 27 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-71 chr5 146698030 146698257 + 2.57096726280955 NA Intergenic Intergenic 96813 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-37 chr15 66728427 66728622 + 2.57096726280955 NA intron (NM_009375, intron 26 of 47) intron (NM_009375, intron 26 of 47) 57754 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-79 chr7 114738220 114738483 + 2.57096726280955 NA Intergenic Intergenic -7415 NM_173767 233752 Mm.83037 NM_173767 ENSMUSG00000048782 Insc 3830422K02Rik|C730020D23 INSC spindle orientation adaptor protein protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-25 chr13 24637721 24637930 + 2.57096726280955 NA promoter-TSS (NM_029679) promoter-TSS (NM_029679) -823 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-51 chr2 119261342 119261573 + 2.57096726280955 NA Intergenic Intergenic 9769 NM_145530 228543 Mm.120274 NM_145530 ENSMUSG00000034226 Rhov A030005A06Rik|Arhv ras homolog family member V protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-9 chr1 183147742 183147961 + 2.57096726280955 NA promoter-TSS (NM_001278220) promoter-TSS (NM_001278220) -294 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-50 chr2 92371230 92371419 + 2.57096726280955 NA promoter-TSS (NM_001290775) promoter-TSS (NM_001290775) -267 NM_001290775 228366 Mm.31158 NM_172670 ENSMUSG00000040434 Large2 5730485C17Rik|AI891893|Gyltl1b|Largel|mKIAA4105 LARGE xylosyl- and glucuronyltransferase 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-27 chr13 35761717 35761924 + 2.57096726280955 NA intron (NM_001123386, intron 1 of 6) intron (NM_001123386, intron 1 of 6) 20418 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-42 chr16 59508693 59509004 + 2.57096726280955 NA intron (NM_174848, intron 14 of 18) intron (NM_174848, intron 14 of 18) 37073 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Riox2 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204|Mina ribosomal oxygenase 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-16 chr10 108388122 108388340 + 2.57096726280955 NA intron (NM_054056, intron 3 of 6) intron (NM_054056, intron 3 of 6) 56042 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-35 chr15 8190245 8190480 + 2.57096726280955 NA intron (NM_001162906, intron 15 of 52) RSINE1|SINE|B4 21256 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-52 chr2 160738379 160738600 + 2.57096726280955 NA intron (NM_021280, intron 2 of 33) intron (NM_021280, intron 2 of 33) 7179 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-4 chr2 118122750 118122987 + 2.57096726280955 NA intron (NM_001313914, intron 17 of 21) intron (NM_001313914, intron 17 of 21) 10992 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-20 chr11 108336841 108337067 + 2.57096726280955 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 6934 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-15 chr10 93359391 93359645 + 2.57096726280955 NA Intergenic Intergenic 23307 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-64 chr4 132044573 132044766 + 2.57096726280955 NA intron (NM_183428, intron 1 of 20) intron (NM_183428, intron 1 of 20) 4409 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-11 chr10 67487802 67488023 + 2.57096726280955 NA Intergenic Intergenic -49957 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-77 chr7 44999545 44999783 + 2.57096726280955 NA intron (NR_045611, intron 2 of 7) intron (NR_045611, intron 2 of 7) 2016 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-2 chr1 72108646 72108860 + 2.57096726280955 NA Intergenic Intergenic 103554 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-45 chr17 81011259 81011496 + 2.57096726280955 NA Intergenic Intergenic 53708 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-61 chr4 56702271 56702470 + 2.57096726280955 NA Intergenic Intergenic 39055 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-44 chr16 93712562 93712750 + 2.57096726280955 NA intron (NM_027293, intron 1 of 36) intron (NM_027293, intron 1 of 36) 749 NM_027293 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-73 chr6 91715046 91715316 + 2.57096726280955 NA intron (NM_009320, intron 2 of 14) intron (NM_009320, intron 2 of 14) 31114 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-7 chr1 138350221 138350493 + 2.57096726280955 NA Intergenic Intergenic 76619 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-3 chr1 74007517 74007757 + 2.57096726280955 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 116810 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-10 chr1 193541567 193541755 + 2.57096726280955 NA Intergenic Intergenic -34131 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-6 chr4 110175271 110175471 + 2.57096726280955 NA Intergenic Intergenic 111463 NM_001357190 15572 Mm.3970 NM_010488 ENSMUSG00000028546 Elavl4 Elav|Hud|PNEM ELAV like RNA binding protein 4 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-13 chr10 69915619 69915809 + 2.57096726280955 NA intron (NM_170689, intron 23 of 41) intron (NM_170689, intron 23 of 41) -9818 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-55 chr3 65303345 65303572 + 2.57096726280955 NA promoter-TSS (NR_126080) promoter-TSS (NR_126080) -773 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-53 chr3 39937627 39937880 + 2.57096726280955 NA Intergenic Intergenic 585159 NR_040445 100040882 Mm.272869 NR_040445 ENSMUSG00000037884 1700017G19Rik - RIKEN cDNA 1700017G19 gene ncRNA unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-8 chr9 9265709 9265956 + 2.57096726280955 NA Intergenic Intergenic -26819 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955 chr1 23681576 23681792 + 2.57096726280955 NA Intergenic Intergenic -80242 NM_172124 280645 Mm.471661 NM_172124 ENSMUSG00000026156 B3gat2 GlcAT-S|Glcats beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-36 chr15 11878753 11878942 + 2.57096726280955 NA intron (NM_001039181, intron 3 of 7) intron (NM_001039181, intron 3 of 7) 26827 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-31 chr13 109170873 109171077 + 2.57096726280955 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -153769 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-47 chr19 5750871 5751091 + 2.57096726280955 NA exon (NM_008520, exon 13 of 28) exon (NM_008520, exon 13 of 28) 10077 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-8 chr1 156620946 156621200 + 2.57096726280955 NA intron (NM_001136104, intron 2 of 12) intron (NM_001136104, intron 2 of 12) 53266 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-12 chr10 69532992 69533237 + 2.57096726280955 NA promoter-TSS (NM_146005) promoter-TSS (NM_146005) -594 NM_170729 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-75 chr6 145883994 145884188 + 2.57096726280955 NA Intergenic Intergenic -18671 NM_001271768 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-63 chr4 128792633 128792845 + 2.57096726280955 NA intron (NM_001081098, intron 2 of 8) intron (NM_001081098, intron 2 of 8) 13373 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-4 chr1 86823148 86823351 + 2.57096726280955 NA intron (NM_001172157, intron 7 of 21) intron (NM_001172157, intron 7 of 21) 119445 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-18 chr11 29514098 29514330 + 2.57096726280955 NA intron (NM_026465, intron 1 of 1) intron (NM_026465, intron 1 of 1) 819 NM_026465 67939 Mm.251087 NM_026465 ENSMUSG00000032673 Prorsd1 2010316F05Rik|Ncrna00117|Prdxdd1 prolyl-tRNA synthetase domain containing 1 protein-coding unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-5 chr3 36446696 36446931 + 2.57096726280955 NA Intergenic Intergenic 28711 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-56 chr3 95630239 95630448 + 2.57096726280955 NA 3' UTR (NM_001026212, exon 3 of 3) 3' UTR (NM_001026212, exon 3 of 3) 5363 NM_001026212 56205 Mm.241365 NM_019561 ENSMUSG00000038619 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-54 chr3 52308249 52308461 + 2.57096726280955 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 40018 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-33 chr14 76688934 76689122 + 2.57096726280955 NA Intergenic Intergenic 11460 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-48 chr19 16347587 16347868 + 2.57096726280955 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -32723 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-7 chr5 51157051 51157264 + 2.57096726280955 NA Intergenic Intergenic 396764 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-43 chr16 91539743 91540012 + 2.57096726280955 NA Intergenic Intergenic -7217 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-70 chr5 136533770 136534060 + 2.57096726280955 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 32066 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-34 chr14 120292411 120292618 + 2.57096726280955 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) -13938 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-46 chr17 87832016 87832279 + 2.57096726280955 NA Intergenic B1F|SINE|Alu -34153 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-5 chr1 89676968 89677185 + 2.57096726280955 NA non-coding (NR_015540, exon 4 of 4) non-coding (NR_015540, exon 4 of 4) 6816 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-21 chr11 118158237 118158454 + 2.57096726280955 NA Intergenic Intergenic -29126 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-76 chr7 16326617 16326823 + 2.57096726280955 NA TTS (NM_019748) TTS (NM_019748) 17137 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-17 chr10 120704653 120704880 + 2.57096726280955 NA Intergenic Intergenic -60966 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-57 chr3 96602558 96602799 + 2.57096726280955 NA intron (NM_001163170, intron 1 of 5) MIRb|SINE|MIR 1545 NM_001163170 280411 Mm.482147 NM_001163170 ENSMUSG00000049288 Lix1l D130027M04Rik Lix1-like protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-38 chr15 91701005 91701236 + 2.57096726280955 NA intron (NM_025730, intron 10 of 50) intron (NM_025730, intron 10 of 50) 27896 NM_025730 66725 Mm.37558 NM_025730 ENSMUSG00000036273 Lrrk2 4921513O20Rik|9330188B09Rik|AW561911|D630001M17Rik|Gm927|cI-46 leucine-rich repeat kinase 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-6 chr1 138323118 138323358 + 2.57096726280955 NA Intergenic Intergenic 49500 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-60 chr4 53228271 53228476 + 2.57096726280955 NA Intergenic Intergenic -17823 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-24 chr13 5801368 5801583 + 2.57096726280955 NA Intergenic Intergenic 56617 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-59 chr3 126383266 126383475 + 2.57096726280955 NA intron (NM_173451, intron 1 of 1) intron (NM_173451, intron 1 of 1) 19518 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-72 chr6 17877022 17877289 + 2.57096726280955 NA intron (NM_022332, intron 9 of 15) intron (NM_022332, intron 9 of 15) 127985 NM_001083315 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955 chr1 51509337 51509630 + 2.57096726280955 NA TTS (NR_151621) TTS (NR_151621) -31084 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-49 chr2 60601394 60601647 + 2.57096726280955 NA intron (NM_021359, intron 14 of 14) intron (NM_021359, intron 14 of 14) -48212 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-39 chr15 99705235 99705586 + 2.57096726280955 NA intron (NM_031842, intron 5 of 12) B2_Mm1a|SINE|B2 3123 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-58 chr3 123206749 123207035 + 2.57096726280955 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) 29257 NM_080451 118449 Mm.34359 NM_080451 ENSMUSG00000050315 Synpo2 1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo synaptopodin 2 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-69 chr5 124052687 124052884 + 2.57096726280955 NA Intergenic B1_Mm|SINE|Alu -20525 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-30 chr13 102885878 102886114 + 2.57096726280955 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 125741 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-26 chr13 32133783 32133988 + 2.57096726280955 NA intron (NM_146041, intron 4 of 10) intron (NM_146041, intron 4 of 10) 204659 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-66 chr4 133025581 133025798 + 2.57096726280955 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 14183 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-19 chr11 43612519 43612844 + 2.57096726280955 NA Intergenic Intergenic -11119 NM_008375 16204 Mm.142716 NM_008375 ENSMUSG00000020405 Fabp6 GT|I-15P|I-BABP|ILBP|ILBP3|Illbp fatty acid binding protein 6, ileal (gastrotropin) protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-41 chr16 43550109 43550297 + 2.57096726280955 NA intron (NM_181058, intron 3 of 6) intron (NM_181058, intron 3 of 6) -90452 NR_030576 100124467 NR_030576 ENSMUSG00000076372 Mir568 Mirn568|mmu-mir-568 microRNA 568 ncRNA unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-32 chr14 60657365 60657618 + 2.57096726280955 NA intron (NM_001033272, intron 1 of 12) intron (NM_001033272, intron 1 of 12) 22786 NM_001033272 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-67 chr4 139088563 139088848 + 2.57096726280955 NA intron (NM_008675, intron 1 of 3) intron (NM_008675, intron 1 of 3) 4265 NM_008675 17965 Mm.9404 NM_008675 ENSMUSG00000041120 Nbl1 D4H1S1733E|DAN|Dana|NO3 neuroblastoma, suppression of tumorigenicity 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-29 chr13 70670115 70670406 + 2.57096726280955 NA Intergenic Intergenic -32626 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-14 chr10 71136544 71136807 + 2.57096726280955 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 23015 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-65 chr4 132062860 132063079 + 2.57096726280955 NA intron (NM_183428, intron 1 of 20) B1_Mur2|SINE|Alu 9128 NM_183428 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-3 chr18 69925292 69925505 + 2.57096726280955 NA promoter-TSS (NM_201362) promoter-TSS (NM_201362) -161 NM_201362 381175 Mm.266831 NM_201362 ENSMUSG00000038903 Ccdc68 BC046343 coiled-coil domain containing 68 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-78 chr7 100227477 100227712 + 2.57096726280955 NA promoter-TSS (NM_027629) promoter-TSS (NM_027629) -13 NM_027629 70974 Mm.440524 NM_027629 ENSMUSG00000030729 Pgm2l1 4931406N15Rik|AI553438|BM32A phosphoglucomutase 2-like 1 protein-coding unique_peak1_11_1_2.31793062601849_2.15896531300925_2.57096726280955-23 chr12 76863447 76863643 + 2.57096726280955 NA intron (NM_145927, intron 2 of 11) intron (NM_145927, intron 2 of 11) 26078 NM_145927 110606 Mm.151174 NM_145927 ENSMUSG00000033373 Fntb 2010013E13Rik|AA409500 farnesyltransferase, CAAX box, beta protein-coding unique_peak2_0_10_-3.70117165612652_1.60884579057403_2.57096726280955-2 chr11 99078333 99078562 + 2.57096726280955 NA exon (NM_172564, exon 4 of 13) exon (NM_172564, exon 4 of 13) 10859 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding common_peak2_50_77_-0.894735759298342_5.83803433921308_2.56976710895951 chr10 17106388 17107449 + 2.56976710895951 NA Intergenic Intergenic -11136 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_71_29_0.977765673490942_5.39577343235399_2.56700509083571 chr9 56912684 56913852 + 2.56700509083571 NA Intergenic PB1D7|SINE|Alu 15103 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding common_peak1_71_29_0.977765673490942_5.39577343235399_2.56700509083571-2 chr15 38452990 38453382 + 2.56700509083571 NA Intergenic Intergenic 37361 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_71_29_0.977765673490942_5.39577343235399_2.56700509083571 chr12 108423204 108423745 + 2.56700509083571 NA intron (NM_001043335, intron 1 of 21) CpG 658 NM_001043335 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak1_98_45_0.817284650994956_5.93220428155449_2.56597041357377 chr10 96767139 96768659 + 2.56597041357377 NA Intergenic Intergenic 150898 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_57_85_-0.851351733324831_6.00058888803968_2.56593925009413 chr12 85201058 85202404 + 2.56593925009413 NA Intergenic Intergenic -17750 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding common_peak1_124_61_0.720704470946068_6.31454854585991_2.56467722642014 chr3 79590893 79592001 + 2.56467722642014 NA 5' UTR (NM_026352, exon 1 of 10) 5' UTR (NM_026352, exon 1 of 10) 110 NM_026352 67738 Mm.295252 NM_026352 ENSMUSG00000027804 Ppid 4930564J03Rik|CYP-40|Ppidl|Ppif peptidylprolyl isomerase D (cyclophilin D) protein-coding common_peak1_80_34_0.924099436182647_5.59133273503629_2.56421248726208 chr11 4703737 4704573 + 2.56421248726208 NA promoter-TSS (NM_001356391) promoter-TSS (NM_001356391) 189 NM_197979 66152 Mm.269736 NM_197979 ENSMUSG00000059534 Uqcr10 1110020P15Rik|AA960494|Ucrc ubiquinol-cytochrome c reductase, complex III subunit X protein-coding common_peak1_79_34_0.90630396688022_5.58243500038508_2.56421248726208 chr2 129128933 129129530 + 2.56421248726208 NA promoter-TSS (NM_025395) promoter-TSS (NM_025395) -469 NM_025395 66170 Mm.40621 NM_025395 ENSMUSG00000037938 Chchd5 1110027L01Rik|AW045710 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding common_peak1_352_214_0.413881494621411_7.95513359690017_2.56025863127823 chr14 25459262 25461433 + 2.56025863127823 NA intron (NM_183208, intron 1 of 23) CpG 1162 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-44 chr2 93350914 93351187 + 2.55640854263862 NA Intergenic Intergenic -16563 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-17 chr11 121719394 121719626 + 2.55640854263862 NA Intergenic Intergenic 17083 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-20 chr12 105003016 105003217 + 2.55640854263862 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -4439 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-40 chr2 29771788 29772001 + 2.55640854263862 NA Intergenic Intergenic 10366 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-50 chr4 81061072 81061279 + 2.55640854263862 NA Intergenic Intergenic 150489 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-35 chr17 73386165 73386527 + 2.55640854263862 NA intron (NM_001033444, intron 1 of 22) intron (NM_001033444, intron 1 of 22) 12950 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-73 chr9 123166128 123166500 + 2.55640854263862 NA Intergenic Intergenic 15368 NM_011606 21922 Mm.34588 NM_011606 ENSMUSG00000025784 Clec3b Tna C-type lectin domain family 3, member b protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-22 chr13 42559672 42559909 + 2.55640854263862 NA Intergenic Intergenic -121009 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-7 chr10 40511641 40511830 + 2.55640854263862 NA Intergenic Intergenic -58627 NM_027572 70840 Mm.332570 NM_027572 ENSMUSG00000019834 Slc22a16 4921504E14Rik|CT2|FLIPT2|OCT6|OKB1 solute carrier family 22 (organic cation transporter), member 16 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-40 chr18 36518923 36519128 + 2.55640854263862 NA Intergenic Intergenic -3220 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862 chr1 89692623 89692978 + 2.55640854263862 NA intron (NM_001037136, intron 9 of 16) intron (NM_001037136, intron 9 of 16) -8908 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-24 chr14 56874924 56875317 + 2.55640854263862 NA Intergenic Intergenic -11483 NM_177627 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-4 chr10 78398995 78399224 + 2.55640854263862 NA Intergenic Intergenic 9436 NR_105872 102465547 NR_105872 ENSMUSG00000098376 Mir6907 Gm27351|mmu-mir-6907 microRNA 6907 ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-69 chr9 43071417 43071624 + 2.55640854263862 NA intron (NM_001359232, intron 1 of 40) intron (NM_001359232, intron 1 of 40) 34198 NM_001359232 69632 Mm.275266 NM_027144 ENSMUSG00000059495 Arhgef12 2310014B11Rik|AU019857|Larg|mKIAA0382 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-27 chr15 11091583 11091819 + 2.55640854263862 NA intron (NM_175501, intron 2 of 23) intron (NM_175501, intron 2 of 23) 26928 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-52 chr3 32336234 32336431 + 2.55640854263862 NA 3' UTR (NM_009517, exon 6 of 6) 3' UTR (NM_009517, exon 6 of 6) -29157 NR_027966 67576 Mm.435324 NR_027966 4930429B21Rik - RIKEN cDNA 4930429B21 gene ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-16 chr11 99459335 99459568 + 2.55640854263862 NA Intergenic Intergenic -21298 NM_023256 66809 Mm.28042 NM_023256 ENSMUSG00000035775 Krt20 9030623C06Rik|Ck-20|Ck20|K20|Krt21 keratin 20 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-13 chr7 109642220 109642461 + 2.55640854263862 NA Intergenic L1M5|LINE|L1 -25193 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-6 chr1 171241035 171241325 + 2.55640854263862 NA intron (NM_153064, intron 2 of 12) intron (NM_153064, intron 2 of 12) 5942 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-25 chr14 67097953 67098214 + 2.55640854263862 NA Intergenic Intergenic -25612 NM_001205188 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-57 chr5 32314289 32314492 + 2.55640854263862 NA intron (NM_001081407, intron 26 of 58) intron (NM_001081407, intron 26 of 58) -39190 NM_172147 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-47 chr2 170126978 170127259 + 2.55640854263862 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 4102 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-9 chr4 130127480 130127753 + 2.55640854263862 NA 3' UTR (NM_026441, exon 5 of 5) 3' UTR (NM_026441, exon 5 of 5) 9674 NM_001357258 230777 Mm.246595 NM_198959 ENSMUSG00000028778 Hcrtr1 Ox1r|ox-1-R|ox1-R hypocretin (orexin) receptor 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-68 chr9 33222126 33222354 + 2.55640854263862 NA Intergenic Intergenic -293274 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-5 chr11 51633038 51633381 + 2.55640854263862 NA intron (NM_025346, intron 1 of 9) intron (NM_025346, intron 1 of 9) 2687 NM_025346 66089 Mm.288183 NM_025346 ENSMUSG00000001054 Rmnd5b 0610039K22Rik|Gid2 required for meiotic nuclear division 5 homolog B protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-35 chr17 72961075 72961298 + 2.55640854263862 NA Intergenic Intergenic 42881 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-63 chr7 134237886 134238161 + 2.55640854263862 NA Intergenic Intergenic -12926 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-55 chr4 138276182 138276376 + 2.55640854263862 NA intron (NM_010623, intron 4 of 14) intron (NM_010623, intron 4 of 14) 14028 NM_010623 16559 Mm.271936 NM_010623 ENSMUSG00000028758 Kif17 5930435E01Rik|AW492270|Kif17b|mKIAA1405 kinesin family member 17 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-11 chr11 29645903 29646200 + 2.55640854263862 NA Intergenic Intergenic -46847 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-12 chr6 99135839 99136100 + 2.55640854263862 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -107671 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-42 chr18 75451793 75452027 + 2.55640854263862 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -62735 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-68 chr8 126535586 126535834 + 2.55640854263862 NA Intergenic Intergenic 57726 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-53 chr3 41577177 41577377 + 2.55640854263862 NA intron (NM_001130186, intron 1 of 10) intron (NM_001130186, intron 1 of 10) 12397 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862 chr1 90503303 90503699 + 2.55640854263862 NA Intergenic Intergenic -99924 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-38 chr18 5510672 5510975 + 2.55640854263862 NA intron (NR_033552, intron 6 of 6) intron (NR_033552, intron 6 of 6) -81037 NM_011546 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-21 chr13 38787237 38787475 + 2.55640854263862 NA Intergenic Intergenic -128328 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-56 chr6 93802430 93802637 + 2.55640854263862 NA intron (NM_001029850, intron 3 of 23) intron (NM_001029850, intron 3 of 23) 110430 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-16 chr11 103696146 103696543 + 2.55640854263862 NA intron (NM_019650, intron 1 of 5) intron (NM_019650, intron 1 of 5) 1366 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-25 chr14 26531583 26531905 + 2.55640854263862 NA intron (NM_001310445, intron 1 of 22) intron (NM_001310445, intron 1 of 22) 2880 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-63 chr7 134647283 134647537 + 2.55640854263862 NA Intergenic Intergenic -23277 NM_001033420 330662 Mm.436572 NM_001033420 ENSMUSG00000058325 Dock1 9130006G06Rik|AI854900|D630004B07Rik|b2b3190Clo dedicator of cytokinesis 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-62 chr7 119894382 119894677 + 2.55640854263862 NA intron (NM_001163703, intron 1 of 2) intron (NM_001163703, intron 1 of 2) 929 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-43 chr2 60650050 60650369 + 2.55640854263862 NA intron (NM_021359, intron 6 of 14) intron (NM_021359, intron 6 of 14) 23484 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-69 chr9 56923327 56923518 + 2.55640854263862 NA intron (NM_175483, intron 1 of 1) intron (NM_175483, intron 1 of 1) 4949 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-45 chr2 90554435 90554747 + 2.55640854263862 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 26056 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-7 chr18 33297046 33297247 + 2.55640854263862 NA Intergenic Intergenic -83284 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-4 chr1 157231754 157231956 + 2.55640854263862 NA intron (NM_177644, intron 3 of 17) intron (NM_177644, intron 3 of 17) -123175 NM_001305063 73435 Mm.116705 NM_028540 ENSMUSG00000026592 Tex35 1700057K13Rik testis expressed 35 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-12 chr10 86102873 86103149 + 2.55640854263862 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 7157 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-28 chr15 61121579 61121831 + 2.55640854263862 NA Intergenic Intergenic -200435 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-54 chr3 98062676 98062892 + 2.55640854263862 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 49246 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-13 chr11 86970552 86970788 + 2.55640854263862 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 23092 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-46 chr2 145749469 145749664 + 2.55640854263862 NA intron (NR_033220, intron 3 of 3) intron (NR_033220, intron 3 of 3) -36550 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-33 chr16 85049236 85049558 + 2.55640854263862 NA intron (NM_001198825, intron 6 of 15) intron (NM_001198825, intron 6 of 15) 77186 NR_045889 100038614 Mm.441351 NR_045889 ENSMUSG00000115518 Gm10791 - predicted gene 10791 ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-64 chr8 9090608 9090882 + 2.55640854263862 NA Intergenic Intergenic 41543 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-48 chr2 154389149 154389356 + 2.55640854263862 NA intron (NM_009228, intron 2 of 7) intron (NM_009228, intron 2 of 7) -16533 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-60 chr7 78925685 78925884 + 2.55640854263862 NA Intergenic Intergenic 11549 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-61 chr7 34931694 34932020 + 2.55640854263862 NA intron (NM_008820, intron 3 of 14) intron (NM_008820, intron 3 of 14) 19450 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-15 chr11 88283356 88283598 + 2.55640854263862 NA Intergenic Intergenic -10566 NM_028859 74297 Mm.207320 NM_028859 ENSMUSG00000034031 Ccdc182 1700106J16Rik coiled-coil domain containing 182 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-2 chr1 131235633 131235836 + 2.55640854263862 NA intron (NM_018750, intron 1 of 5) intron (NM_018750, intron 1 of 5) 9444 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-23 chr13 95622755 95623003 + 2.55640854263862 NA Intergenic Intergenic -4413 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-18 chr12 76556546 76556740 + 2.55640854263862 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -8718 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-16 chr9 44688366 44688600 + 2.55640854263862 NA intron (NM_153537, intron 21 of 21) intron (NM_153537, intron 21 of 21) 15250 NM_001277847 58866 Mm.45380 NM_021481 ENSMUSG00000032098 Treh 2210412M19Rik trehalase (brush-border membrane glycoprotein) protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-5 chr1 181741327 181741556 + 2.55640854263862 NA Intergenic Intergenic 100960 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-54 chr6 3594082 3594342 + 2.55640854263862 NA intron (NM_001167751, intron 24 of 26) intron (NM_001167751, intron 24 of 26) 95819 NM_001167750 73288 Mm.45539 NM_024260 ENSMUSG00000001376 Vps50 1700034M03Rik|8430415E05Rik|BLM|C87205|Ccdc132|mKIAA1861 VPS50 EARP/GARPII complex subunit protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-71 chr9 60310008 60310240 + 2.55640854263862 NA intron (NM_001040426, intron 6 of 17) intron (NM_001040426, intron 6 of 17) -168904 NM_172444 207596 Mm.28791 NM_172444 ENSMUSG00000032289 Thsd4 ADAMTSL-6|ADAMTSL6|AI585901|Adamtsl4|B230114P05Rik thrombospondin, type I, domain containing 4 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-13 chr10 96766728 96766928 + 2.55640854263862 NA Intergenic Intergenic 149827 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-30 chr15 84716157 84716581 + 2.55640854263862 NA intron (NR_040347, intron 2 of 2) MT2B1|LTR|ERVL -3683 NM_001164628 73167 Mm.128411 NM_028455 ENSMUSG00000078954 Arhgap8 3110043J09Rik Rho GTPase activating protein 8 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-6 chr10 8787656 8787883 + 2.55640854263862 NA intron (NM_175155, intron 5 of 19) intron (NM_175155, intron 5 of 19) 98301 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-11 chr10 82984574 82984841 + 2.55640854263862 NA promoter-TSS (NM_021439) promoter-TSS (NM_021439) -790 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-32 chr16 58163247 58163566 + 2.55640854263862 NA Intergenic Intergenic -245129 NM_001356484 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-41 chr18 62915299 62915641 + 2.55640854263862 NA Intergenic Intergenic -6857 NM_133237 494504 Mm.391102 NM_133237 ENSMUSG00000071847 Apcdd1 AB023957|AU041258|Drapc1|EIG180 adenomatosis polyposis coli down-regulated 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-45 chr2 145227141 145227530 + 2.55640854263862 NA intron (NM_001356497, intron 1 of 16) intron (NM_001356497, intron 1 of 16) -15276 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-57 chr7 5075118 5075330 + 2.55640854263862 NA exon (NM_133671, exon 10 of 12) exon (NM_133671, exon 10 of 12) -5011 NM_010147 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-21 chr13 38736062 38736366 + 2.55640854263862 NA Intergenic Intergenic -77186 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-3 chr10 40639083 40639293 + 2.55640854263862 NA intron (NR_133568, intron 3 of 4) intron (NR_133568, intron 3 of 4) 9177 NR_133568 70503 Mm.252862 NM_027442 ENSMUSG00000063428 Ddo 5330420D20Rik|5730402C02Rik|AI467244 D-aspartate oxidase protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-18 chr12 65498547 65498783 + 2.55640854263862 NA Intergenic Intergenic 273148 NM_027614 70948 Mm.219475 NM_027614 ENSMUSG00000035560 Wdr20rt 4921538B03Rik|4930427E19Rik|Wdr20|Wdr20b WD repeat domain 20, retrogene protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-72 chr9 99242889 99243095 + 2.55640854263862 NA promoter-TSS (NM_023873) promoter-TSS (NM_023873) -349 NM_023873 68121 Mm.288739 NM_023873 ENSMUSG00000056267 Cep70 6720484E09Rik|Bite|C030018L16Rik centrosomal protein 70 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-11 chr6 15543876 15544170 + 2.55640854263862 NA Intergenic Intergenic -176638 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-34 chr16 57560830 57561040 + 2.55640854263862 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 11693 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-20 chr13 5805710 5806007 + 2.55640854263862 NA Intergenic Intergenic 52234 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-65 chr8 122028557 122028862 + 2.55640854263862 NA 3' UTR (NM_001110100, exon 14 of 14) 3' UTR (NM_001110100, exon 14 of 14) 50685 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-26 chr14 54435438 54435708 + 2.55640854263862 NA intron (NM_008608, intron 1 of 9) intron (NM_008608, intron 1 of 9) 3975 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-48 chr2 181579742 181580042 + 2.55640854263862 NA intron (NR_027290, intron 1 of 1) intron (NR_027290, intron 1 of 1) 360 NR_027290 100271841 Mm.438007 NR_027289 ENSMUSG00000010492 Uckl1os Gm16119 uridine-cytidine kinase 1-like 1, opposite strand ncRNA unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-2 chr1 156037716 156037994 + 2.55640854263862 NA intron (NM_172843, intron 1 of 6) intron (NM_172843, intron 1 of 6) -1375 NM_001160018 208263 Mm.211654 NM_144791 ENSMUSG00000026466 Tor1aip1 LAP1|Lap1B torsin A interacting protein 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-66 chr8 24863745 24863972 + 2.55640854263862 NA intron (NM_153397, intron 18 of 21) intron (NM_153397, intron 18 of 21) -39489 NM_001272059 11499 Mm.143889 NM_007401 ENSMUSG00000031554 Adam5 tMDC II|tMDCII a disintegrin and metallopeptidase domain 5 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-36 chr17 75215215 75215491 + 2.55640854263862 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 36572 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-3 chr1 131243602 131243873 + 2.55640854263862 NA intron (NM_018750, intron 1 of 5) intron (NM_018750, intron 1 of 5) 1441 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-51 chr4 84638405 84638797 + 2.55640854263862 NA intron (NM_172870, intron 1 of 5) intron (NM_172870, intron 1 of 5) 36485 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-8 chr2 30767832 30768110 + 2.55640854263862 NA Intergenic Intergenic 33766 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-5 chr1 170136684 170136946 + 2.55640854263862 NA Intergenic PB1D7|SINE|Alu 38149 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-14 chr11 31366474 31366661 + 2.55640854263862 NA intron (NM_011491, intron 2 of 3) intron (NM_011491, intron 2 of 3) 3494 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-64 chr8 94707812 94708051 + 2.55640854263862 NA Intergenic Intergenic -11689 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-10 chr10 97453692 97453908 + 2.55640854263862 NA Intergenic Intergenic -25700 NM_001190451 13179 Mm.56769 NM_007833 ENSMUSG00000019929 Dcn DC|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-8 chr10 93342885 93343093 + 2.55640854263862 NA intron (NR_038014, intron 1 of 2) intron (NR_038014, intron 1 of 2) 6778 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-3 chr1 93164814 93165052 + 2.55640854263862 NA Intergenic Intergenic -3490 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-17 chr9 70502649 70502867 + 2.55640854263862 NA intron (NM_001357494, intron 2 of 14) intron (NM_001357494, intron 2 of 14) 620 NM_001357494 93836 Mm.29783 NM_033604 ENSMUSG00000032217 Rnf111 ARK|Arkadia ring finger 111 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-52 chr5 120517484 120517679 + 2.55640854263862 NA intron (NM_001177595, intron 2 of 13) intron (NM_001177595, intron 2 of 13) 6389 NM_001177594 170756 Mm.291070 NM_133221 ENSMUSG00000032754 Slc8b1 AF261233|NCKX6|NCLX|Slc24a6 solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-67 chr8 68705802 68706058 + 2.55640854263862 NA intron (NM_172753, intron 1 of 9) intron (NM_172753, intron 1 of 9) 29216 NM_001252623 234356 Mm.334569 NM_172753 ENSMUSG00000036356 Csgalnact1 4732435N03Rik|CSGalNAcT-1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-47 chr2 148206506 148206845 + 2.55640854263862 NA Intergenic Intergenic -159706 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-10 chr10 80679358 80679672 + 2.55640854263862 NA Intergenic Intergenic -3222 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-43 chr19 4169108 4169332 + 2.55640854263862 NA intron (NM_134148, intron 9 of 9) B1_Mus1|SINE|Alu -5837 NR_153659 58988 Mm.271937 NM_021485 ENSMUSG00000024830 Rps6kb2 S6K-beta-2|S6K2 ribosomal protein S6 kinase, polypeptide 2 protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-10 chr5 147431298 147431539 + 2.55640854263862 NA intron (NM_028291, intron 1 of 18) intron (NM_028291, intron 1 of 18) 1262 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-33 chr16 55842914 55843122 + 2.55640854263862 NA 3' UTR (NM_001134457, exon 6 of 6) 3' UTR (NM_001134457, exon 6 of 6) -4377 NM_001159395 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-15 chr11 97315335 97315523 + 2.55640854263862 NA promoter-TSS (NM_025927) promoter-TSS (NM_025927) -287 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-39 chr18 24877629 24877898 + 2.55640854263862 NA intron (NM_001289654, intron 3 of 24) intron (NM_001289654, intron 3 of 24) 169140 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-62 chr7 126482161 126482435 + 2.55640854263862 NA Intergenic Intergenic -5057 NM_172745 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-34 chr17 14395513 14395764 + 2.55640854263862 NA intron (NR_027986, intron 1 of 2) intron (NR_027986, intron 1 of 2) 3304 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-32 chr16 25048803 25049002 + 2.55640854263862 NA Intergenic Intergenic -10737 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-12 chr11 80484871 80485114 + 2.55640854263862 NA intron (NM_177390, intron 21 of 21) B1F|SINE|Alu 7969 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-9 chr10 94378893 94379211 + 2.55640854263862 NA intron (NM_001359762, intron 1 of 4) MER94|DNA|hAT-Blackjack 67103 NM_001359762 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-29 chr15 63730775 63731019 + 2.55640854263862 NA Intergenic Intergenic 77842 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-59 chr7 49274002 49274195 + 2.55640854263862 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 27909 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-59 chr6 84124159 84124417 + 2.55640854263862 NA intron (NM_001077694, intron 30 of 54) intron (NM_001077694, intron 30 of 54) 104902 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-31 chr16 37440526 37440734 + 2.55640854263862 NA Intergenic Intergenic -55672 NM_172440 207227 Mm.80170 NM_172440 ENSMUSG00000022829 Stxbp5l 9430094L02|A830015P08Rik|LLGL4|T2dm1|t2md1|tomosyn-2 syntaxin binding protein 5-like protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-55 chr6 55338043 55338329 + 2.55640854263862 NA intron (NM_007472, intron 1 of 3) intron (NM_007472, intron 1 of 3) 1887 NM_007472 11826 Mm.18625 NM_007472 ENSMUSG00000004655 Aqp1 CHIP28 aquaporin 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-39 chr19 56043501 56043692 + 2.55640854263862 NA Intergenic Intergenic 148275 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-8 chr10 21997063 21997289 + 2.55640854263862 NA intron (NM_011361, intron 8 of 11) intron (NM_011361, intron 8 of 11) 2510 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-17 chr11 108276238 108276472 + 2.55640854263862 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 67533 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-49 chr2 167059543 167059754 + 2.55640854263862 NA intron (NM_001033196, intron 2 of 13) intron (NM_001033196, intron 2 of 13) -3286 NR_138563 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-4 chr1 180329089 180329276 + 2.55640854263862 NA non-coding (NR_003623, exon 1 of 1) non-coding (NR_003623, exon 1 of 1) -1294 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-58 chr5 113178594 113178791 + 2.55640854263862 NA Intergenic Intergenic -15379 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-46 chr2 102849650 102849852 + 2.55640854263862 NA intron (NM_009851, intron 5 of 18) intron (NM_009851, intron 5 of 18) 51914 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-7 chr1 177015462 177015713 + 2.55640854263862 NA intron (NM_001357390, intron 18 of 18) intron (NM_001357390, intron 18 of 18) -179454 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-42 chr2 52622372 52622781 + 2.55640854263862 NA intron (NM_001037099, intron 2 of 13) intron (NM_001037099, intron 2 of 13) 53283 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-19 chr12 104913150 104913402 + 2.55640854263862 NA Intergenic Intergenic -48200 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-56 chr5 21645062 21645296 + 2.55640854263862 NA promoter-TSS (NM_026034) promoter-TSS (NM_026034) 426 NM_001199632 320118 Mm.442295 NM_177076 ENSMUSG00000048520 Fbxl13 4921539K22Rik F-box and leucine-rich repeat protein 13 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862 chr1 10285392 10285589 + 2.55640854263862 NA Intergenic Intergenic -52820 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-6 chr13 36295217 36295511 + 2.55640854263862 NA intron (NM_001039189, intron 3 of 5) intron (NM_001039189, intron 3 of 5) 177721 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-67 chr9 21462927 21463203 + 2.55640854263862 NA intron (NM_001357721, intron 2 of 19) intron (NM_001357721, intron 2 of 19) 33499 NR_029585 387194 NR_029585 ENSMUSG00000065547 Mir199a-1 Mirn199|Mirn199a-1|mir-199a-1 microRNA 199a-1 ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-38 chr19 21814954 21815157 + 2.55640854263862 NA intron (NM_001033759, intron 10 of 23) intron (NM_001033759, intron 10 of 23) 36715 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-70 chr9 67003524 67003754 + 2.55640854263862 NA Intergenic Intergenic -28155 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-58 chr7 25789188 25789383 + 2.55640854263862 NA promoter-TSS (NM_001190974) promoter-TSS (NM_001190974) -552 NM_001190975 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-66 chr8 123883043 123883273 + 2.55640854263862 NA Intergenic Intergenic 11617 NM_001272041 11459 Mm.214950 NM_009606 ENSMUSG00000031972 Acta1 AA959943|Acta-2|Acts|Actsk-1 actin, alpha 1, skeletal muscle protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-30 chr15 102841209 102841399 + 2.55640854263862 NA Intergenic Intergenic -79827 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-22 chr13 41329064 41329369 + 2.55640854263862 NA intron (NM_001111324, intron 3 of 7) intron (NM_001111324, intron 3 of 7) 29785 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-31 chr16 24499130 24499351 + 2.55640854263862 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -30074 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-71 chr9 96771151 96771408 + 2.55640854263862 NA intron (NR_102295, intron 2 of 2) intron (NR_102295, intron 2 of 2) 5717 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-27 chr15 10702344 10702558 + 2.55640854263862 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 11089 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-49 chr4 3760736 3761052 + 2.55640854263862 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 45930 NR_028126 70720 Mm.445696 NR_028126 6330407A03Rik - RIKEN cDNA 6330407A03 gene ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-37 chr17 85162530 85162786 + 2.55640854263862 NA intron (NM_028576, intron 3 of 10) PB1|SINE|Alu 71958 NM_028576 73582 Mm.260753 NM_028576 ENSMUSG00000071037 Camkmt 1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT calmodulin-lysine N-methyltransferase protein-coding unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-15 chr7 144024745 144025013 + 2.55640854263862 NA Intergenic Intergenic 15625 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-24 chr14 25607745 25607939 + 2.55640854263862 NA intron (NM_183208, intron 6 of 23) CpG 4329 NM_001309430 100188919 Mm.473810 NM_001309430 Gm45915 Israa predicted gene, 45915 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-2 chr1 11087069 11087351 + 2.55640854263862 NA intron (NM_029525, intron 5 of 39) intron (NM_029525, intron 5 of 39) 93745 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-28 chr15 53902186 53902477 + 2.55640854263862 NA intron (NM_177225, intron 1 of 4) intron (NM_177225, intron 1 of 4) 105 NM_177225 320679 Mm.442455 NM_177225 ENSMUSG00000058656 Samd12 A830094I09Rik sterile alpha motif domain containing 12 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-44 chr2 51288259 51288478 + 2.55640854263862 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 46537 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-37 chr19 12473491 12473747 + 2.55640854263862 NA intron (NM_172442, intron 7 of 8) intron (NM_172442, intron 7 of 8) 12840 NM_010821 17476 Mm.3999 NM_010821 ENSMUSG00000046805 Mpeg1 MPS1|Mpg-1 macrophage expressed gene 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-41 chr2 34552711 34553063 + 2.55640854263862 NA intron (NM_001290625, intron 7 of 11) intron (NM_001290625, intron 7 of 11) 146036 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-9 chr10 78756524 78756753 + 2.55640854263862 NA Intergenic Intergenic -3571 NM_027630 70976 Mm.188505 NM_027630 ENSMUSG00000078442 Ccdc105 4931413A09Rik coiled-coil domain containing 105 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-23 chr13 63725026 63725237 + 2.55640854263862 NA intron (NR_126476, intron 3 of 4) intron (NR_126476, intron 3 of 4) 9167 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-14 chr11 88605007 88605202 + 2.55640854263862 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -14147 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_1_12_-2.94923473520356_2.22582235053931_2.55640854263862-14 chr7 139387872 139388100 + 2.55640854263862 NA Intergenic Intergenic -1123 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-26 chr14 120845876 120846069 + 2.55640854263862 NA Intergenic Intergenic -65222 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-29 chr15 73460569 73460811 + 2.55640854263862 NA Intergenic Intergenic -37499 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-65 chr8 22254546 22254856 + 2.55640854263862 NA intron (NM_001205253, intron 3 of 3) intron (NM_001205253, intron 3 of 3) 27398 NM_001293688 56229 Mm.32067 NM_019576 ENSMUSG00000031480 Thsd1 4833423O18Rik|Tmtsp thrombospondin, type I, domain 1 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-51 chr3 27861901 27862185 + 2.55640854263862 NA Intergenic Intergenic 34325 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-61 chr7 80172319 80172545 + 2.55640854263862 NA Intergenic Intergenic -14409 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-60 chr7 34268671 34268876 + 2.55640854263862 NA intron (NM_172741, intron 1 of 12) intron (NM_172741, intron 1 of 12) 16836 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-50 chr2 174022407 174022653 + 2.55640854263862 NA Intergenic Intergenic -54521 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-53 chr5 134990052 134990243 + 2.55640854263862 NA intron (NR_026907, intron 3 of 4) intron (NR_026907, intron 3 of 4) 3933 NM_009902 12739 Mm.158662 NM_009902 ENSMUSG00000070473 Cldn3 AI182374|Cpetr2|mRVP1 claudin 3 protein-coding unique_peak1_14_2_2.05262502405122_2.61127501274676_2.55640854263862-36 chr18 60889655 60889900 + 2.55640854263862 NA Intergenic Intergenic -22463 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-19 chr12 84880995 84881219 + 2.55640854263862 NA Intergenic MIRb|SINE|MIR -4612 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak1_13_2_1.95379157264401_2.56185828704316_2.55640854263862-70 chr9 57238579 57238827 + 2.55640854263862 NA intron (NM_001014398, intron 1 of 12) intron (NM_001014398, intron 1 of 12) 2147 NM_001014398 541610 Mm.378036 NM_001014398 ENSMUSG00000070298 Trcg1 - taste receptor cell gene 1 protein-coding common_peak2_70_98_-0.764735878372878_6.24698868089317_2.55325102046388 chr3 137332207 137333186 + 2.55325102046388 NA Intergenic Intergenic -8382 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak1_119_58_0.7337795366908_6.24953281770724_2.55325102046388 chr12 86789705 86790891 + 2.55325102046388 NA Intergenic Intergenic 55929 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak2_106_136_-0.645866045931368_6.77509905999484_2.55195960510772 chr11 106255200 106256712 + 2.55195960510772 NA promoter-TSS (NM_008950) promoter-TSS (NM_008950) 128 NM_025310 56095 Mm.29795 NM_025310 ENSMUSG00000020706 Ftsj3 AA537063|AU045295|C79843|D11Ertd400e|Epcs3 FtsJ RNA methyltransferase homolog 3 (E. coli) protein-coding common_peak1_166_88_0.614138941060147_6.78280290149647_2.55195960510772 chr11 55418558 55419776 + 2.55195960510772 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 913 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak1_130_65_0.697668189083937_6.39322821390042_2.55072877587339 chr10 128322284 128323481 + 2.55072877587339 NA intron (NM_019953, intron 1 of 5) intron (NM_019953, intron 1 of 5) 423 NM_019953 56530 Mm.44220 NM_019953 ENSMUSG00000025381 Cnpy2 5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9 canopy FGF signaling regulator 2 protein-coding common_peak2_78_107_-0.737319835888192_6.38622758421937_2.55072877587337 chr9 102716667 102717557 + 2.55072877587337 NA promoter-TSS (NM_019764) promoter-TSS (NM_019764) -692 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_153_80_0.633929469713321_6.65681473774128_2.55044935056688 chr5 115542101 115543821 + 2.55044935056688 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -16506 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_159_84_0.61914106811424_6.71896147019482_2.55020994166799 chr3 130729487 130730307 + 2.55020994166799 NA intron (NM_001005859, intron 1 of 4) CpG 432 NM_001199350 619547 Mm.391636 NM_001199350 Rpl34-ps1 EG619547|Gm10239 ribosomal protein L34, pseudogene 1 protein-coding common_peak2_134_163_-0.57240323453729_7.07135038734944_2.54959105505431 chr10 78590302 78591871 + 2.54959105505431 NA intron (NM_027875, intron 1 of 7) intron (NM_027875, intron 1 of 7) 878 NM_027875 71709 Mm.86439 NM_027875 ENSMUSG00000032714 Syde1 1200008N06Rik|BB043000|mSYD1A synapse defective 1, Rho GTPase, homolog 1 (C. elegans) protein-coding common_peak2_32_56_-1.06582402976698_5.29997799928125_2.54838911320017 chr15 11518740 11519671 + 2.54838911320017 NA Intergenic Intergenic -119547 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_67_27_0.995420955705604_5.30506539991041_2.54838911320016 chr2 102872513 102873183 + 2.54838911320016 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 28817 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_67_27_0.995420955705604_5.30506539991041_2.54838911320016 chr14 76778491 76779062 + 2.54838911320016 NA Intergenic Intergenic 18645 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_67_27_0.995420955705604_5.30506539991041_2.54838911320016 chr4 139227658 139228349 + 2.54838911320016 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 33892 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_84_37_0.874505263073501_5.68518014498034_2.54750191086936 chr13 60936794 60937519 + 2.54750191086936 NA promoter-TSS (NM_007796) promoter-TSS (NM_007796) -531 NM_007796 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak1_84_37_0.874505263073501_5.68518014498034_2.54750191086936-2 chr14 118750336 118751416 + 2.54750191086936 NA Intergenic Intergenic -36995 NM_001160098 58187 Mm.390755 NM_021386 ENSMUSG00000022132 Cldn10 6720456I16Rik|Cldn10a|Cldn10b|D14Ertd728e claudin 10 protein-coding common_peak1_84_37_0.874505263073501_5.68518014498034_2.54750191086936 chr13 60936801 60937523 + 2.54750191086936 NA promoter-TSS (NM_007796) promoter-TSS (NM_007796) -537 NM_007796 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak2_775_745_-0.252586204563892_9.41673871797329_2.54675932176713 chr15 77885080 77891740 + 2.54675932176713 NA Intergenic Intergenic 40584 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak2_17_38_-1.3866359906163_4.5920842235541_2.54214423428716 chr1 161365483 161365914 + 2.54214423428716 NA Intergenic Intergenic -29740 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding common_peak2_17_38_-1.3866359906163_4.5920842235541_2.54214423428716 chr11 76243766 76244135 + 2.54214423428716 NA promoter-TSS (NM_026029) promoter-TSS (NM_026029) 214 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding unique_peak2_17_38_-1.3866359906163_4.5920842235541_2.54214423428716-3 chr9 57974431 57974935 + 2.54214423428716 NA Intergenic Intergenic -23341 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716 chr1 58908738 58909585 + 2.54214423428716 NA intron (NM_172406, intron 13 of 15) intron (NM_172406, intron 13 of 15) 64321 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding unique_peak2_17_38_-1.3866359906163_4.5920842235541_2.54214423428716-2 chr15 27422405 27423109 + 2.54214423428716 NA Intergenic ID_B1|SINE|B4 -43920 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716-6 chr9 77743270 77744195 + 2.54214423428716 NA Intergenic Intergenic -10803 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716-2 chr11 100288218 100288978 + 2.54214423428716 NA Intergenic Intergenic -18727 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding common_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716 chr2 168548396 168548781 + 2.54214423428716 NA intron (NM_001037177, intron 3 of 6) intron (NM_001037177, intron 3 of 6) 41777 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716-3 chr16 8857628 8858213 + 2.54214423428716 NA 3' UTR (NM_001081400, exon 4 of 4) 3' UTR (NM_001081400, exon 4 of 4) 27820 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716-4 chr2 45455356 45456145 + 2.54214423428716 NA Intergenic Intergenic -240855 NR_040497 69405 Mm.396184 NR_040497 ENSMUSG00000086202 1700019E08Rik - RIKEN cDNA 1700019E08 gene ncRNA unique_peak1_45_15_1.24285330179625_4.62142665089813_2.54214423428716-5 chr2 70262400 70263100 + 2.54214423428716 NA intron (NM_177376, intron 23 of 34) intron (NM_177376, intron 23 of 34) -212173 NM_022435 64406 Mm.423397 NM_022435 ENSMUSG00000075304 Sp5 - trans-acting transcription factor 5 protein-coding common_peak2_45_15_1.24285330179625_4.62142665089813_2.54214423428716 chr8 17556226 17556681 + 2.54214423428716 NA Intergenic B1F1|SINE|Alu -21068 NM_053171 94109 Mm.436988 NM_053171 ENSMUSG00000060924 Csmd1 B930082H09|mKIAA1890 CUB and Sushi multiple domains 1 protein-coding common_peak2_118_147_-0.605018438291612_6.90694414648314_2.54173774283295 chr11 78187933 78189393 + 2.54173774283295 NA promoter-TSS (NM_033475) promoter-TSS (NM_033475) -85 NM_033475 19376 Mm.275864 NM_033475 ENSMUSG00000002059 Rab34 AI326479|Narr|Rah|Rah1 RAB34, member RAS oncogene family protein-coding common_peak1_214_120_0.532926232542228_7.18532635354571_2.54079204879683 chr15 76198975 76200515 + 2.54079204879683 NA promoter-TSS (NM_201391) promoter-TSS (NM_201391) 90 NM_201391 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_402_250_0.380294156692839_8.16169063229719_2.53901059084688 chr3 87156582 87159618 + 2.53901059084688 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 16647 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_76_32_0.936440332812736_5.51261428576482_2.5383910031143 chr14 54572175 54572703 + 2.5383910031143 NA intron (NM_010590, intron 2 of 7) intron (NM_010590, intron 2 of 7) 5222 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_89_40_0.846761163235255_5.78093258623571_2.53684336221073 chr3 61340008 61341148 + 2.53684336221073 NA Intergenic Intergenic -23929 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_48_74_-0.895460547129826_5.78108841693097_2.53684336221073 chr16 78375856 78376681 + 2.53684336221073 NA intron (NM_001297747, intron 1 of 4) CpG 489 NR_002700 654432 Mm.458574 NR_002700 ENSMUSG00000044645 Gm7334 EG654432 B-cell translocation gene 3 pseudogene pseudo common_peak1_48_74_-0.895460547129826_5.78108841693097_2.53684336221073 chr12 75979357 75979973 + 2.53684336221073 NA intron (NM_001005510, intron 51 of 115) intron (NM_001005510, intron 51 of 115) 70562 NR_039560 100628610 NR_039560 ENSMUSG00000092922 Mir5101 mmu-mir-5101|mu-mir-5101 microRNA 5101 ncRNA common_peak1_109_52_0.763856867214495_6.10984888817045_2.53634419610405 chr2 152825257 152826930 + 2.53634419610405 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 2396 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_173_93_0.59410479235384_6.85164124785456_2.53599046075158 chr8 85060133 85061696 + 2.53599046075158 NA promoter-TSS (NR_110581) promoter-TSS (NR_110581) -454 NR_110581 320466 Mm.401371 NR_110581 ENSMUSG00000087026 A230103J11Rik - RIKEN cDNA A230103J11 gene ncRNA common_peak2_88_117_-0.694335822961914_6.53547513788088_2.53385960387708 chr4 126752924 126754187 + 2.53385960387708 NA promoter-TSS (NM_001355413) promoter-TSS (NM_001355413) 0 NM_001035525 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding common_peak2_29_53_-1.12435495696434_5.1927100236813_2.53311195323981-2 chr9 108977378 108977921 + 2.53311195323981 NA exon (NM_007738, exon 95 of 118) exon (NM_007738, exon 95 of 118) 7727 NR_030492 751536 NR_030492 ENSMUSG00000076142 Mir711 Mirn711|mir-711|mmu-mir-711 microRNA 711 ncRNA common_peak1_63_25_1.01549036693022_5.2081849016062_2.53311195323981 chr18 5989545 5989948 + 2.53311195323981 NA Intergenic Intergenic 146352 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding unique_peak1_64_25_1.03770037549466_5.21928990588842_2.53311195323981 chr15 80850669 80851499 + 2.53311195323981 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 52474 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_29_53_-1.12435495696434_5.1927100236813_2.53311195323981 chr11 116198857 116199822 + 2.53311195323981 NA promoter-TSS (NM_015729) promoter-TSS (NM_015729) -294 NM_015729 11430 Mm.356689 NM_015729 ENSMUSG00000020777 Acox1 AOX|Acox|D130055E20Rik|Paox acyl-Coenzyme A oxidase 1, palmitoyl protein-coding common_peak1_64_25_1.03770037549466_5.21928990588842_2.53311195323981 chr7 28919288 28919791 + 2.53311195323981 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 37883 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding common_peak1_94_43_0.822333755088484_5.87059849618154_2.53115226249491 chr16 4595796 4596740 + 2.53115226249491 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 1555 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_94_43_0.822333755088484_5.87059849618154_2.53115226249491-2 chr5 107996765 107998461 + 2.53115226249491 NA Intergenic (TTTC)n|Simple_repeat|Simple_repeat -10536 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_99_46_0.800655030901426_5.95491636712835_2.52958947854362 chr2 164436397 164437556 + 2.52958947854362 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 6212 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_103_132_-0.643854220192566_6.73335532540491_2.52914441450398 chr12 86103944 86105554 + 2.52914441450398 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 22188 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak1_155_81_0.634711812917996_6.67490791107708_2.52845451209481 chr10 97060186 97061987 + 2.52845451209481 NA TTS (NR_045358) TTS (NR_045358) 25318 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak1_199_226_-0.478359584285095_7.58736869514837_2.5263901584103 chr6 108660710 108662596 + 2.5263901584103 NA promoter-TSS (NR_104577) promoter-TSS (NR_104577) -719 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_223_126_0.521849468300027_7.24960942092218_2.52432927612995 chr15 99032015 99033955 + 2.52432927612995 NA intron (NM_009448, intron 1 of 3) intron (NM_009448, intron 1 of 3) 3094 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-10 chr7 19082064 19082497 + 2.52428350728854 NA exon (NM_010058, exon 5 of 5) exon (NM_010058, exon 5 of 5) -1569 NR_126095 13400 Mm.6529 NM_032418 ENSMUSG00000030409 Dmpk DM|DMK|Dm15|MDPK|MT-PK dystrophia myotonica-protein kinase protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-2 chr10 21609879 21610246 + 2.52428350728854 NA intron (NR_027968, intron 2 of 2) intron (NR_027968, intron 2 of 2) 16917 NR_027968 67692 Mm.54306 NM_183266 ENSMUSG00000050844 1700020N01Rik - RIKEN cDNA 1700020N01 gene ncRNA unique_peak2_10_28_-1.66469563338402_4.02563317843556_2.52428350728854 chr7 94819203 94819835 + 2.52428350728854 NA Intergenic Intergenic -1351725 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-3 chr10 80759114 80759710 + 2.52428350728854 NA intron (NM_199322, intron 1 of 27) intron (NM_199322, intron 1 of 27) 4209 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854 chr10 12801523 12802155 + 2.52428350728854 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 59896 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-5 chr11 117231877 117232265 + 2.52428350728854 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) 32410 NM_001113486 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_10_28_-1.66469563338402_4.02563317843556_2.52428350728854-2 chr8 35641752 35642250 + 2.52428350728854 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -52981 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-4 chr11 49095782 49096190 + 2.52428350728854 NA exon (NM_001271677, exon 3 of 3) exon (NM_001271677, exon 3 of 3) 8969 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_10_28_-1.66469563338402_4.02563317843556_2.52428350728854 chr15 55121072 55121417 + 2.52428350728854 NA intron (NM_145470, intron 1 of 8) intron (NM_145470, intron 1 of 8) -7662 NR_045093 100503794 Mm.360519 NR_045093 ENSMUSG00000053749 Gm9920 - predicted gene 9920 ncRNA unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-7 chr14 66802569 66803143 + 2.52428350728854 NA TTS (NM_009955) TTS (NM_009955) 65744 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-13 chr9 107316056 107316683 + 2.52428350728854 NA Intergenic Intergenic 19710 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-11 chr8 18784695 18785052 + 2.52428350728854 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -43311 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-12 chr8 92009885 92010186 + 2.52428350728854 NA Intergenic Intergenic -208381 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-6 chr13 51313964 51314405 + 2.52428350728854 NA Intergenic Intergenic -94434 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-9 chr4 40819329 40820031 + 2.52428350728854 NA intron (NM_022305, intron 2 of 5) intron (NM_022305, intron 2 of 5) 30458 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA unique_peak1_33_9_1.48790276244909_4.06587947611191_2.52428350728854-8 chr19 53010514 53011143 + 2.52428350728854 NA promoter-TSS (NR_105834) promoter-TSS (NR_105834) -72 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA unique_peak1_49_17_1.19237386071_4.76611193179731_2.52371590646434-2 chr5 93135603 93136233 + 2.52371590646434 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 42502 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_20_41_-1.27272774718614_4.75595354918569_2.52371590646434 chr17 78389465 78390136 + 2.52371590646434 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 28352 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_20_41_-1.27272774718614_4.75595354918569_2.52371590646434-2 chr2 115581299 115581691 + 2.52371590646434 NA promoter-TSS (NM_001145898) promoter-TSS (NM_001145898) -221 NM_207264 399568 Mm.134929 NM_207264 ENSMUSG00000040282 BC052040 - cDNA sequence BC052040 protein-coding unique_peak2_19_41_-1.34262047980709_4.72100718287522_2.52371590646434-2 chr5 3504676 3505526 + 2.52371590646434 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -38732 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding unique_peak1_49_17_1.19237386071_4.76611193179731_2.52371590646434 chr12 86896628 86897368 + 2.52371590646434 NA Intergenic Intergenic -12184 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_49_17_1.19237386071_4.76611193179731_2.52371590646434 chr2 151914446 151914806 + 2.52371590646434 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 3419 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding unique_peak1_49_17_1.19237386071_4.76611193179731_2.52371590646434-3 chrX 74423692 74424312 + 2.52371590646434 NA promoter-TSS (NM_001136067) promoter-TSS (NM_001136067) -610 NM_001161421 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding unique_peak2_19_41_-1.34262047980709_4.72100718287522_2.52371590646434 chr11 115412298 115412939 + 2.52371590646434 NA TTS (NM_001347645) TTS (NM_001347645) 7301 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding common_peak1_60_23_1.06219356858172_5.11605928501202_2.52189133554691 chr15 13246293 13246901 + 2.52189133554691 NA Intergenic Intergenic -72922 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_42_67_-0.941220311040907_5.61685268572989_2.5182653668895 chr17 36000728 36001312 + 2.5182653668895 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 6516 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA unique_peak2_42_67_-0.941220311040907_5.61685268572989_2.5182653668895 chr2 6141201 6142260 + 2.5182653668895 NA Intergenic Intergenic 8847 NR_033471 100038358 Mm.353975 NR_033470 ENSMUSG00000102887 Gm10857 AU015850 predicted gene 10857 ncRNA common_peak1_81_35_0.901034566158126_5.62044228452138_2.51826536688949 chr4 123617445 123618518 + 2.51826536688949 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) 1561 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak1_53_19_1.1506187560128_4.89723747289376_2.51570129041513-2 chr6 120798596 120799115 + 2.51570129041513 NA intron (NM_007510, intron 7 of 8) PB1|SINE|Alu 23843 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|Vma4|p31 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding unique_peak1_52_19_1.1238419603825_4.88384907507861_2.51570129041513 chr12 27998472 27999159 + 2.51570129041513 NA Intergenic Intergenic 549522 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding common_peak1_52_19_1.1238419603825_4.88384907507861_2.51570129041513-2 chr17 93380254 93380879 + 2.51570129041513 NA Intergenic Intergenic 181398 NM_009625 11516 Mm.3407 NM_009625 ENSMUSG00000024256 Adcyap1 PACAP adenylate cyclase activating polypeptide 1 protein-coding unique_peak1_53_19_1.1506187560128_4.89723747289376_2.51570129041513 chr19 57237666 57238412 + 2.51570129041513 NA Intergenic Intergenic -22007 NM_178688 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding unique_peak1_52_19_1.1238419603825_4.88384907507861_2.51570129041513-2 chr7 98414023 98414666 + 2.51570129041513 NA Intergenic Intergenic -26072 NM_001130693 14918 Mm.389928 NM_001034890 ENSMUSG00000074003 Gucy2d - guanylate cyclase 2d protein-coding common_peak1_52_19_1.1238419603825_4.88384907507861_2.51570129041513-3 chr18 34651214 34651702 + 2.51570129041513 NA exon (NM_178347, exon 2 of 16) exon (NM_178347, exon 2 of 16) 278 NM_178347 52563 Mm.196638 NM_178347 ENSMUSG00000024370 Cdc23 6030435O18|D18Ertd243e CDC23 cell division cycle 23 protein-coding common_peak1_52_19_1.1238419603825_4.88384907507861_2.51570129041513 chr14 16364404 16364978 + 2.51570129041513 NA promoter-TSS (NM_009409) promoter-TSS (NM_009409) -515 NM_009409 21974 Mm.130362 NM_009409 ENSMUSG00000017485 Top2b D230016L12Rik|Top-2 topoisomerase (DNA) II beta protein-coding common_peak1_137_70_0.666886804945783_6.48319052197757_2.51569669612835 chr14 20674436 20675263 + 2.51569669612835 NA intron (NM_172596, intron 1 of 22) intron (NM_172596, intron 1 of 22) 528 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak2_85_113_-0.693702463528552_6.48603878240047_2.51569669612835 chr6 51470217 51471433 + 2.51569669612835 NA promoter-TSS (NM_182650) promoter-TSS (NM_182650) 209 NM_007624 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding common_peak1_56_21_1.0905674381353_5.00471533770495_2.51566814918164 chr8 78716067 78716545 + 2.51566814918164 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 104846 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_56_21_1.0905674381353_5.00471533770495_2.51566814918164 chr7 111984957 111985680 + 2.51566814918164 NA Intergenic Intergenic -38188 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak2_25_47_-1.15942432626604_5.00525033758813_2.51566814918164 chr1 36456692 36457402 + 2.51566814918164 NA Intergenic ORR1E|LTR|ERVL-MaLR -11776 NM_001310517 214895 Mm.287854 NM_001013374 ENSMUSG00000001143 Lman2l A630028F14Rik|VIP36-like|VIPL lectin, mannose-binding 2-like protein-coding common_peak2_25_47_-1.15942432626604_5.00525033758813_2.51566814918164 chr10 108385162 108386081 + 2.51566814918164 NA intron (NM_054056, intron 3 of 6) intron (NM_054056, intron 3 of 6) 53432 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_25_47_-1.15942432626604_5.00525033758813_2.51566814918164-3 chr8 45529214 45529989 + 2.51566814918164 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) 21813 NM_001205219 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_25_47_-1.15942432626604_5.00525033758813_2.51566814918164-2 chr2 148184328 148184733 + 2.51566814918164 NA Intergenic Intergenic -137561 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak1_72_30_0.950219125179052_5.4293058729764_2.51461642049155-2 chr3 144682515 144683486 + 2.51461642049155 NA TTS (NM_001282042) TTS (NM_001282042) 37335 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_72_30_0.950219125179052_5.4293058729764_2.51461642049155 chr2 155133534 155134124 + 2.51461642049155 NA intron (NM_001243712, intron 1 of 25) CpG 348 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak2_35_60_-1.03902608889018_5.4112242931178_2.51461642049155 chr11 35838097 35838874 + 2.51461642049155 NA TTS (NM_170779) TTS (NM_170779) -3957 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak2_14_33_-1.44987531647797_4.36252518301136_2.51395164919446 chr10 27651837 27652475 + 2.51395164919446 NA Intergenic RLTR18|LTR|ERVK -35214 NM_008481 16773 Mm.256087 NM_008481 ENSMUSG00000019899 Lama2 5830440B04|dy|mKIAA4087|mer|merosin laminin, alpha 2 protein-coding unique_peak1_39_12_1.34220224525734_4.37154084076976_2.51395164919446-5 chrX 38564485 38564950 + 2.51395164919446 NA intron (NM_028288, intron 3 of 22) CpG 11479 NM_028288 72584 Mm.327675 NM_028288 ENSMUSG00000031095 Cul4b 2700050M05Rik|AA409770|CUL-4B|mKIAA0695 cullin 4B protein-coding unique_peak2_13_33_-1.54870876788517_4.31310845730775_2.51395164919446 chr8 113975004 113975667 + 2.51395164919446 NA Intergenic Intergenic -126496 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding common_peak2_14_33_-1.44987531647797_4.36252518301136_2.51395164919446-2 chr9 87464365 87464870 + 2.51395164919446 NA Intergenic Intergenic -209085 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding common_peak1_39_12_1.34220224525734_4.37154084076976_2.51395164919446 chr8 83652702 83652939 + 2.51395164919446 NA intron (NM_018771, intron 1 of 6) CpG 142 NM_018771 67903 Mm.20945 NM_018771 ENSMUSG00000019433 Gipc1 GIPC|Glut1CIP|Rgs19ip1|Semcap1|TIP-2|TaxIP2 GIPC PDZ domain containing family, member 1 protein-coding unique_peak2_14_33_-1.44987531647797_4.36252518301136_2.51395164919446-3 chr7 68266407 68266871 + 2.51395164919446 NA non-coding (NR_040341, exon 3 of 3) non-coding (NR_040341, exon 3 of 3) -2406 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak2_14_33_-1.44987531647797_4.36252518301136_2.51395164919446-2 chr7 4779641 4780136 + 2.51395164919446 NA intron (NM_001290423, intron 1 of 4) intron (NM_001290423, intron 1 of 4) -1747 NM_008350 16156 Mm.35814 NM_008350 ENSMUSG00000004371 Il11 IL-11 interleukin 11 protein-coding unique_peak2_14_33_-1.44987531647797_4.36252518301136_2.51395164919446 chr4 43656035 43656470 + 2.51395164919446 NA intron (NM_026871, intron 1 of 4) CpG 193 NM_026871 68917 Mm.25285 NM_026871 ENSMUSG00000028470 Hint2 1190005L05Rik histidine triad nucleotide binding protein 2 protein-coding unique_peak1_39_12_1.34220224525734_4.37154084076976_2.51395164919446-4 chr4 123624541 123624884 + 2.51395164919446 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) 8292 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak1_39_12_1.34220224525734_4.37154084076976_2.51395164919446-3 chr3 37362420 37363134 + 2.51395164919446 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 14124 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak1_39_12_1.34220224525734_4.37154084076976_2.51395164919446 chr18 52640476 52640994 + 2.51395164919446 NA TTS (NM_025749) TTS (NM_025749) -5485 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding unique_peak1_39_12_1.34220224525734_4.37154084076976_2.51395164919446-2 chr19 37966605 37967011 + 2.51395164919446 NA intron (NM_001302140, intron 19 of 53) intron (NM_001302140, intron 19 of 53) 76769 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_109_138_-0.627163750945813_6.8053591972506_2.51186366385804 chr6 148943470 148945770 + 2.51186366385804 NA promoter-TSS (NR_144294) promoter-TSS (NR_144294) 206 NM_001355645 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding common_peak1_89_118_-0.690504595454605_6.54956546558064_2.51017737428194 chr19 28246676 28247541 + 2.51017737428194 NA Intergenic Intergenic -235942 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_144_74_0.658696250062022_6.55816681552689_2.51017737428194 chr15 103005176 103006149 + 2.51017737428194 NA Intergenic Intergenic -3900 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding common_peak1_143_74_0.648782599030336_6.55320999001105_2.51017737428194 chr9 44482403 44484256 + 2.51017737428194 NA 5' UTR (NM_001357490, exon 1 of 8) 5' UTR (NM_001357490, exon 1 of 8) 504 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_126_63_0.697639621573916_6.34881981078696_2.5093104925512 chr9 57644927 57645692 + 2.5093104925512 NA 5' UTR (NM_007783, exon 1 of 13) 5' UTR (NM_007783, exon 1 of 13) 344 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_94_123_-0.672430936661094_6.61798084205633_2.50735929950938 chr9 101074046 101075322 + 2.50735929950938 NA promoter-TSS (NM_001100451) promoter-TSS (NM_001100451) -78 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 MSL complex subunit 2 protein-coding common_peak1_99_128_-0.65598337284419_6.68323556900116_2.5068892013689 chr8 109868614 109869466 + 2.5068892013689 NA intron (NM_001122594, intron 1 of 18) CpG 437 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding common_peak1_86_38_0.870346404742472_5.72057542123348_2.5049306780031 chr2 19684581 19685676 + 2.5049306780031 NA Intergenic Intergenic 27066 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding unique_peak1_86_38_0.870346404742472_5.72057542123348_2.5049306780031 chr16 33837107 33837906 + 2.5049306780031 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 7841 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_86_38_0.870346404742472_5.72057542123348_2.5049306780031-2 chr2 158213955 158215183 + 2.5049306780031 NA intron (NM_001131021, intron 4 of 15) intron (NM_001131021, intron 4 of 15) 14655 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak1_110_53_0.749853861548185_6.12981443293756_2.50453829962263 chr14 73142791 73143929 + 2.50453829962263 NA intron (NR_033185, intron 1 of 15) CpG 575 NR_033185 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_110_53_0.749853861548185_6.12981443293756_2.50453829962263-2 chr7 55842287 55843207 + 2.50453829962263 NA intron (NM_011370, intron 1 of 30) intron (NM_011370, intron 1 of 30) 676 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_64_91_-0.785421862421265_6.13085102484638_2.50453829962263 chr5 135778685 135779260 + 2.50453829962263 NA promoter-TSS (NM_001289554) promoter-TSS (NM_001289554) 323 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak2_659_642_-0.270171962469286_9.1935889460933_2.49987206809607 chr3 88138128 88144309 + 2.49987206809607 NA Intergenic Intergenic -1154 NM_001310593 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak2_105_50_0.766289733725121_6.05557020883406_2.49809689582241 chr19 5423826 5424766 + 2.49809689582241 NA promoter-TSS (NM_001256515) promoter-TSS (NM_001256515) 683 NM_024176 66556 Mm.275446 NM_024176 ENSMUSG00000024914 Drap1 2310074H19Rik|NC2-alpha Dr1 associated protein 1 (negative cofactor 2 alpha) protein-coding common_peak1_105_50_0.766289733725121_6.05557020883406_2.49809689582241 chr4 133910075 133911074 + 2.49809689582241 NA Intergenic CpG -22777 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_176_95_0.588219207255733_6.87907210434902_2.49804199690703 chr19 36207229 36208709 + 2.49804199690703 NA Intergenic Intergenic -88125 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_90_41_0.827824821677238_5.80622983361738_2.49711562224991 chr11 58104141 58105025 + 2.49711562224991 NA intron (NM_001356477, intron 1 of 6) CpG 354 NM_001356477 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak2_91_41_0.84348089944425_5.81405787250089_2.49711562224991 chr14 74732367 74733367 + 2.49711562224991 NA intron (NM_001285423, intron 1 of 8) intron (NM_001285423, intron 1 of 8) 570 NM_016903 13885 Mm.38055 NM_016903 ENSMUSG00000021996 Esd Es-10|Es10|FGH|sid478 esterase D/formylglutathione hydrolase protein-coding common_peak1_49_75_-0.885628651291277_5.80511318779795_2.49711562224991 chr6 42489315 42489968 + 2.49711562224991 NA Intergenic Intergenic -2427 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak1_91_41_0.84348089944425_5.81405787250089_2.49711562224991-2 chr14 74732365 74733385 + 2.49711562224991 NA intron (NM_001285423, intron 1 of 8) intron (NM_001285423, intron 1 of 8) 578 NM_016903 13885 Mm.38055 NM_016903 ENSMUSG00000021996 Esd Es-10|Es10|FGH|sid478 esterase D/formylglutathione hydrolase protein-coding common_peak1_91_41_0.84348089944425_5.81405787250089_2.49711562224991-3 chr15 84234999 84235541 + 2.49711562224991 NA intron (NM_133167, intron 1 of 12) intron (NM_133167, intron 1 of 12) 3227 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak1_91_41_0.84348089944425_5.81405787250089_2.49711562224991 chr13 55623051 55623725 + 2.49711562224991 NA intron (NM_007596, intron 1 of 3) intron (NM_007596, intron 1 of 3) 383 NM_007596 12328 Mm.2313 NM_007596 ENSMUSG00000021501 Caml AI385748|Camlg calcium modulating ligand protein-coding unique_peak1_91_41_0.84348089944425_5.81405787250089_2.49711562224991 chr16 49948012 49949962 + 2.49711562224991 NA Intergenic Intergenic -6843 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA common_peak2_72_100_-0.753796047185868_6.28131345915886_2.49570709997167 chr5 103376616 103377783 + 2.49570709997167 NA Intergenic Intergenic 30601 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak1_225_128_0.512040466663753_7.26724748875513_2.49551085775382 chr6 43265076 43267082 + 2.49551085775382 NA intron (NM_133674, intron 1 of 14) intron (NM_133674, intron 1 of 14) 435 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak2_100_47_0.784535398536257_5.97723019998928_2.49437462228564 chr8 121084628 121085195 + 2.49437462228564 NA exon (NM_010426, exon 1 of 2) exon (NM_010426, exon 1 of 2) 525 NM_010426 15227 Mm.33897 NM_010426 ENSMUSG00000042812 Foxf1 AI450827|FREAC1|Foxf1a|Freac-1|HFH-8|Hfh8 forkhead box F1 protein-coding common_peak1_96_44_0.819757458081403_5.90173182537038_2.49384873262486 chr2 32451629 32452649 + 2.49384873262486 NA promoter-TSS (NM_001164357) promoter-TSS (NM_001164357) -669 NM_146118 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_69_28_0.986320017844987_5.35114100405007_2.49326259230166-2 chr4 33246685 33247543 + 2.49326259230166 NA intron (NM_001033225, intron 1 of 1) intron (NM_001033225, intron 1 of 1) 1673 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak1_69_28_0.986320017844987_5.35114100405007_2.49326259230166 chr14 76778510 76779157 + 2.49326259230166 NA Intergenic Intergenic 18702 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_33_57_-1.04815013779112_5.33390592623201_2.49326259230166-2 chr17 30576086 30576732 + 2.49326259230166 NA promoter-TSS (NM_027060) promoter-TSS (NM_027060) -122 NM_027060 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak2_33_57_-1.04815013779112_5.33390592623201_2.49326259230166 chr10 19082454 19082962 + 2.49326259230166 NA Intergenic Intergenic -59041 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_68_28_0.965707908896137_5.34083494957564_2.49326259230166 chr2 155133586 155134107 + 2.49326259230166 NA intron (NM_001243712, intron 1 of 25) CpG 365 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak1_68_28_0.965707908896137_5.34083494957564_2.49326259230166 chr8 25804258 25805357 + 2.49326259230166 NA TTS (NM_026032) TTS (NM_026032) -3667 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding common_peak2_86_114_-0.689741427339654_6.50061933727455_2.49130525035523 chr2 113847952 113849449 + 2.49130525035523 NA promoter-TSS (NM_181416) promoter-TSS (NM_181416) -39 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding unique_peak1_77_33_0.911855955858985_5.54339081917983_2.49055970218346 chr17 79342074 79343325 + 2.49055970218346 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 12392 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_77_33_0.911855955858985_5.54339081917983_2.49055970218346 chr14 24490734 24491352 + 2.49055970218346 NA intron (NM_001360586, intron 1 of 5) CpG 290 NM_001360586 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding common_peak1_77_33_0.911855955858985_5.54339081917983_2.49055970218346-2 chr7 128528929 128529925 + 2.49055970218346 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 5844 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_121_150_-0.598303649595446_6.93925291452735_2.48721560200209 chr17 46554948 46556112 + 2.48721560200209 NA exon (NM_020493, exon 1 of 7) exon (NM_020493, exon 1 of 7) 632 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding common_peak2_91_119_-0.671092273385508_6.57134445891576_2.48699670810112 chr12 25131572 25133262 + 2.48699670810112 NA TTS (NR_045844) TTS (NR_045844) 3243 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_145_75_0.649432942549097_6.57264398471813_2.48699670810112 chr17 46281400 46282961 + 2.48699670810112 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 846 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak2_151_79_0.633125400511296_6.63849079514301_2.48525259113198 chr9 45845010 45846328 + 2.48525259113198 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 7124 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak1_151_79_0.633125400511296_6.63849079514301_2.48525259113198 chr4 72199288 72200851 + 2.48525259113198 NA 5' UTR (NM_001285529, exon 1 of 20) 5' UTR (NM_001285529, exon 1 of 20) 824 NM_011599 21885 Mm.278444 NM_011599 ENSMUSG00000008305 Tle1 C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l transducin-like enhancer of split 1 protein-coding common_peak2_69_96_-0.755611829214569_6.22210692757984_2.48373556229109 chr17 34586508 34587887 + 2.48373556229109 NA exon (NM_010929, exon 29 of 30) exon (NM_010929, exon 29 of 30) -2609 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak1_69_96_-0.755611829214569_6.22210692757984_2.48373556229109 chr11 100320078 100320911 + 2.48373556229109 NA intron (NM_011508, intron 1 of 3) CpG 545 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding common_peak1_116_57_0.722173404209206_6.21906769723218_2.48373556229108 chr13 15659328 15660557 + 2.48373556229108 NA intron (NM_008130, intron 7 of 14) intron (NM_008130, intron 7 of 14) 142688 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak2_116_57_0.722173404209206_6.21906769723218_2.48373556229108 chr9 56160273 56161024 + 2.48373556229108 NA intron (NM_019793, intron 1 of 6) CpG 422 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_127_64_0.686507292469609_6.36562145926326_2.48264092047823 chr11 98148880 98150357 + 2.48264092047823 NA promoter-TSS (NM_028149) promoter-TSS (NM_028149) -2 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-2 chr11 96726601 96726881 + 2.47979361197949 NA intron (NM_001033186, intron 10 of 12) intron (NM_001033186, intron 10 of 12) 50814 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak2_9_26_-1.69813557961855_3.90581971235419_2.47979361197949-2 chr8 3416480 3416852 + 2.47979361197949 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 23658 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-8 chr3 145675044 145675451 + 2.47979361197949 NA Intergenic Intergenic -25262 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949 chr2 13385616 13385844 + 2.47979361197949 NA intron (NM_001081084, intron 29 of 66) intron (NM_001081084, intron 29 of 66) 106146 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-9 chr5 124923462 124923979 + 2.47979361197949 NA Intergenic B1_Mm|SINE|Alu 61015 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-4 chr19 30289286 30289754 + 2.47979361197949 NA Intergenic Intergenic 56563 NM_010776 17195 Mm.30045 NM_010776 ENSMUSG00000024863 Mbl2 L-MBP|MBL|MBL-C|MBP-C mannose-binding lectin (protein C) 2 protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-7 chr3 121597119 121597622 + 2.47979361197949 NA Intergenic Intergenic 46115 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949 chr9 80165730 80166180 + 2.47979361197949 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 921 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-8 chr9 50888162 50888657 + 2.47979361197949 NA intron (NM_001286553, intron 15 of 16) intron (NM_001286553, intron 15 of 16) 31485 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949 chr1 73995812 73996236 + 2.47979361197949 NA intron (NM_001289895, intron 7 of 32) intron (NM_001289895, intron 7 of 32) 128423 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-11 chr9 44494783 44495116 + 2.47979361197949 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) -4187 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_9_26_-1.69813557961855_3.90581971235419_2.47979361197949 chr15 10747380 10747705 + 2.47979361197949 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 32642 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-6 chr3 116115019 116115395 + 2.47979361197949 NA intron (NM_011693, intron 7 of 8) intron (NM_011693, intron 7 of 8) 14481 NM_011693 22329 Mm.76649 NM_011693 ENSMUSG00000027962 Vcam1 CD106|Vcam-1 vascular cell adhesion molecule 1 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-2 chr14 54882905 54883237 + 2.47979361197949 NA promoter-TSS (NM_007537) promoter-TSS (NM_007537) -354 NM_007537 12050 Mm.6967 NM_007537 ENSMUSG00000089682 Bcl2l2 AW048834|Bcl-w|Gtrgal2|Gtrosa41|bclw|c98 BCL2-like 2 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-4 chr17 5139286 5139696 + 2.47979361197949 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 144417 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-3 chr15 62293278 62293915 + 2.47979361197949 NA Intergenic Intergenic -74145 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_9_26_-1.69813557961855_3.90581971235419_2.47979361197949-3 chrX 8096635 8096859 + 2.47979361197949 NA promoter-TSS (NR_003632) promoter-TSS (NR_003632) -340 NR_003632 627782 Mm.305432 NM_001037930 ENSMUSG00000086404 Gm6787 EG627782 proteasome (prosome, macropain) subunit, beta type 7 pseudogene pseudo unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-3 chr16 55529213 55529753 + 2.47979361197949 NA Intergenic Intergenic 34752 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-6 chr17 75113350 75113635 + 2.47979361197949 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -65289 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_30_8_1.50757951768371_3.92371476028417_2.47979361197949-5 chr2 141271881 141272393 + 2.47979361197949 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -600661 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-7 chr2 145338919 145339261 + 2.47979361197949 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 96479 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949 chr10 120723838 120724264 + 2.47979361197949 NA Intergenic Intergenic -41681 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-10 chr8 18632517 18632983 + 2.47979361197949 NA intron (NM_173189, intron 8 of 13) intron (NM_173189, intron 8 of 13) 37619 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak1_31_8_1.55306006320224_3.94645503304343_2.47979361197949-5 chr17 26956848 26957468 + 2.47979361197949 NA exon (NM_001281491, exon 8 of 19) exon (NM_001281491, exon 8 of 19) -9039 NR_037244 100526534 NR_037244 ENSMUSG00000093118 Mir3083 mir-3083|mmu-mir-3083 microRNA 3083 ncRNA unique_peak1_43_14_1.27228480698854_4.54303299910279_2.47671208917977 chr2 168414159 168414642 + 2.47671208917977 NA Intergenic Intergenic -145069 NM_001081134 241794 Mm.425102 NM_001081134 ENSMUSG00000074575 Kcng1 AW536275 potassium voltage-gated channel, subfamily G, member 1 protein-coding unique_peak1_43_14_1.27228480698854_4.54303299910279_2.47671208917977-2 chr8 94904529 94904865 + 2.47671208917977 NA intron (NM_001033533, intron 8 of 8) intron (NM_001033533, intron 8 of 8) 13401 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding common_peak2_16_36_-1.39256752871925_4.51316960126932_2.47671208917977 chr3 121671981 121672236 + 2.47671208917977 NA intron (NM_001033814, intron 2 of 5) intron (NM_001033814, intron 2 of 5) 1345 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_43_14_1.27228480698854_4.54303299910279_2.47671208917977 chr19 7569229 7569561 + 2.47671208917977 NA intron (NM_001362425, intron 2 of 4) B2_Mm2|SINE|B2 11910 NM_001362425 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 AdPLA|C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak1_31_54_-1.05837464888011_5.25217238908461_2.47480076710858-2 chr17 34587079 34587496 + 2.47480076710858 NA intron (NM_010929, intron 29 of 29) CpG-6279 -2519 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak1_31_54_-1.05837464888011_5.25217238908461_2.47480076710858 chr17 27909349 27909755 + 2.47480076710858 NA promoter-TSS (NM_026836) promoter-TSS (NM_026836) 246 NM_181413 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding common_peak1_65_26_1.00512350266105_5.25744925349399_2.47480076710857-2 chr6 72788556 72789402 + 2.47480076710857 NA promoter-TSS (NM_009332) promoter-TSS (NM_009332) 66 NM_001079822 21415 Mm.440067 NM_009332 ENSMUSG00000055799 Tcf7l1 Tcf-3|Tcf3|bHLHb21 transcription factor 7 like 1 (T cell specific, HMG box) protein-coding common_peak1_65_26_1.00512350266105_5.25744925349399_2.47480076710857 chr10 62339503 62340197 + 2.47480076710857 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 571 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_43_68_-0.929349054181109_5.64384992968762_2.47417834929132-2 chr8 94706661 94707653 + 2.47417834929132 NA Intergenic Intergenic -10915 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak2_43_68_-0.929349054181109_5.64384992968762_2.47417834929132 chr2 26902258 26902848 + 2.47417834929132 NA intron (NM_009298, intron 1 of 4) intron (NM_009298, intron 1 of 4) 334 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding common_peak1_82_36_0.878870255261968_5.64888849325993_2.47417834929131 chr14 105258581 105259332 + 2.47417834929131 NA exon (NM_001190989, exon 1 of 8) exon (NM_001190989, exon 1 of 8) 283 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak1_111_54_0.736229421120776_6.14947442408505_2.47363556430882 chr5 92220043 92221119 + 2.47363556430882 NA Intergenic Intergenic -5173 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak1_171_92_0.592973759954913_6.83564569108549_2.47318160576332 chr12 3776999 3779332 + 2.47318160576332 NA intron (NR_027870, intron 18 of 19) intron (NR_027870, intron 18 of 19) -28815 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak1_164_88_0.596879493038752_6.77417317748577_2.46826846503263 chr15 89168927 89170406 + 2.46826846503263 NA intron (NM_001159521, intron 3 of 37) intron (NM_001159521, intron 3 of 37) 4285 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak2_213_120_0.526247820181321_7.18198714736526_2.4670523065875 chr3 87154341 87156016 + 2.4670523065875 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 19569 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_152_180_-0.535398804865088_7.23214648465066_2.46653021701076 chr8 85071425 85072496 + 2.46653021701076 NA exon (NM_001039514, exon 1 of 9) exon (NM_001039514, exon 1 of 9) 203 NM_001039514 330817 Mm.193086 NM_201408 ENSMUSG00000060038 Dhps Dhs deoxyhypusine synthase protein-coding common_peak2_37_61_-0.985032855841728_5.46167988246601_2.46464192547841 chr13 23760581 23761178 + 2.46464192547841 NA TTS (NM_178192) TTS (NM_178192) 370 NM_178192 326619 Mm.228709 NM_178192 ENSMUSG00000060093 Hist1h4a - histone cluster 1, H4a protein-coding common_peak1_73_31_0.923905761484198_5.4619528807421_2.4646419254784 chr1 194977358 194978111 + 2.4646419254784 NA promoter-TSS (NR_033564) promoter-TSS (NR_033564) -775 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_92_120_-0.667578095494358_6.58507418952742_2.46430169899007 chr8 22536190 22537760 + 2.46430169899007 NA intron (NM_011394, intron 2 of 10) intron (NM_011394, intron 2 of 10) 56838 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_87_39_0.850192328136453_5.74702425895559_2.4639682861317 chr15 102990522 102991380 + 2.4639682861317 NA exon (NM_010466, exon 1 of 2) exon (NM_010466, exon 1 of 2) 412 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding common_peak2_46_72_-0.916163255577963_5.73174293109104_2.4639682861317 chr10 34282278 34282903 + 2.4639682861317 NA exon (NM_009433, exon 1 of 1) exon (NM_009433, exon 1 of 1) 400 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding common_peak1_129_157_-0.572695634114599_7.0174329311198_2.46222414879997 chr8 83165449 83166454 + 2.46222414879997 NA 5' UTR (NM_027758, exon 1 of 18) 5' UTR (NM_027758, exon 1 of 18) 599 NM_027758 71310 Mm.24031 NM_027758 ENSMUSG00000031709 Tbc1d9 4933431N12Rik|AI847101|AW490653|C76116 TBC1 domain family, member 9 protein-coding unique_peak1_61_24_1.02659334977806_5.15715286466375_2.45983369815837 chr7 114275470 114276017 + 2.45983369815837 NA intron (NM_011965, intron 1 of 9) intron (NM_011965, intron 1 of 9) 373 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_61_24_1.02659334977806_5.15715286466375_2.45983369815837-2 chr7 25269181 25269967 + 2.45983369815837 NA intron (NM_001302811, intron 1 of 20) intron (NM_001302811, intron 1 of 20) 1875 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_61_24_1.02659334977806_5.15715286466375_2.45983369815837 chr11 74522829 74523528 + 2.45983369815837 NA intron (NM_001015046, intron 2 of 24) CpG 66980 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_92_42_0.825020387078139_5.83877494824117_2.45879583194289 chr2 174076056 174076917 + 2.45879583194289 NA promoter-TSS (NM_172675) promoter-TSS (NM_172675) -565 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding common_peak1_92_42_0.825020387078139_5.83877494824117_2.45879583194289 chr2 103566237 103567657 + 2.45879583194289 NA exon (NM_178890, exon 1 of 17) exon (NM_178890, exon 1 of 17) 637 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_54_80_-0.841017701533685_5.91934115211778_2.45778990690048 chr6 71631976 71632837 + 2.45778990690048 NA intron (NM_001362200, intron 1 of 25) CpG 280 NM_173001 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak2_97_45_0.802741207735798_5.92493255992491_2.45778990690047 chr7 25711088 25711844 + 2.45778990690047 NA 3' UTR (NM_028771, exon 5 of 5) 3' UTR (NM_028771, exon 5 of 5) 7587 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_97_45_0.802741207735798_5.92493255992491_2.45778990690047 chr6 114892223 114893808 + 2.45778990690047 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 28806 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-4 chr13 45469399 45469615 + 2.45535166244229 NA Intergenic Intergenic -37937 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-2 chr6 134921851 134922185 + 2.45535166244229 NA exon (NM_009875, exon 2 of 3) exon (NM_009875, exon 2 of 3) 1617 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-4 chr14 8257699 8258363 + 2.45535166244229 NA intron (NM_053115, intron 1 of 14) intron (NM_053115, intron 1 of 14) 808 NM_001161667 93732 Mm.28700 NM_053115 ENSMUSG00000021751 Acox2 THCCox acyl-Coenzyme A oxidase 2, branched chain protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-10 chr5 146273513 146274102 + 2.45535166244229 NA intron (NM_153599, intron 4 of 12) intron (NM_153599, intron 4 of 12) 42557 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229 chr1 64787277 64787901 + 2.45535166244229 NA Intergenic Intergenic -49839 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak2_12_31_-1.56740684597164_4.21629657701418_2.45535166244229 chr11 62089052 62089482 + 2.45535166244229 NA intron (NM_001029936, intron 1 of 12) intron (NM_001029936, intron 1 of 12) 12243 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-11 chrX 10719622 10720378 + 2.45535166244229 NA TTS (NM_001166635) TTS (NM_001166635) 2635 NM_001166635 68041 Mm.29429 NM_026524 ENSMUSG00000008035 Mid1ip1 3110038L01Rik|Mig12|S14R Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-5 chr14 20190601 20191301 + 2.45535166244229 NA Intergenic Intergenic -9169 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-2 chr11 3911142 3911414 + 2.45535166244229 NA intron (NM_153142, intron 1 of 1) intron (NM_153142, intron 1 of 1) 3386 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-7 chr2 27676493 27676825 + 2.45535166244229 NA promoter-TSS (NM_011305) promoter-TSS (NM_011305) -542 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-6 chr19 3377493 3377885 + 2.45535166244229 NA intron (NM_013495, intron 14 of 18) intron (NM_013495, intron 14 of 18) -11168 NM_001039658 17771 Mm.209941 NM_010841 ENSMUSG00000024905 Tesmin Mtl5 testis expressed metallothionein like protein-coding unique_peak2_12_31_-1.56740684597164_4.21629657701418_2.45535166244229-2 chr13 15550159 15550796 + 2.45535166244229 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 86754 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-12 chrX 6417805 6418638 + 2.45535166244229 NA intron (NM_001313764, intron 1 of 8) L2|LINE|L2 2479 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-8 chr3 142497259 142497881 + 2.45535166244229 NA intron (NM_153564, intron 1 of 10) intron (NM_153564, intron 1 of 10) 636 NM_153564 229898 Mm.459245 NM_153564 ENSMUSG00000105504 Gbp5 5330409J06Rik|Gbp5a guanylate binding protein 5 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-7 chr3 53063668 53064069 + 2.45535166244229 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 22321 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-9 chr4 24898286 24898760 + 2.45535166244229 NA intron (NM_026742, intron 1 of 2) intron (NM_026742, intron 1 of 2) 440 NM_026742 68493 Mm.204831 NM_026742 ENSMUSG00000028261 Ndufaf4 1110007M04Rik|3000003G13Rik|AW214064 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-10 chr5 113099363 113099644 + 2.45535166244229 NA intron (NM_172884, intron 2 of 7) intron (NM_172884, intron 2 of 7) -17919 NM_001359009 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding common_peak2_12_31_-1.56740684597164_4.21629657701418_2.45535166244229 chr12 111433192 111433550 + 2.45535166244229 NA Intergenic Intergenic -9290 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-8 chr4 114585034 114585634 + 2.45535166244229 NA intron (NM_001085549, intron 3 of 6) intron (NM_001085549, intron 3 of 6) 178610 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-9 chr5 125046875 125047382 + 2.45535166244229 NA intron (NM_011424, intron 21 of 46) intron (NM_011424, intron 21 of 46) 43653 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_12_31_-1.56740684597164_4.21629657701418_2.45535166244229-2 chr15 77594988 77595488 + 2.45535166244229 NA intron (NM_177820, intron 1 of 3) intron (NM_177820, intron 1 of 3) 887 NM_177820 328561 Mm.379486 NM_177820 ENSMUSG00000050014 Apol10b 9130218O11Rik apolipoprotein L 10B protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229 chr1 97976755 97977068 + 2.45535166244229 NA exon (NM_013626, exon 2 of 26) exon (NM_013626, exon 2 of 26) 70882 NR_037993 78603 Mm.442597 NR_037993 ENSMUSG00000089706 B230216N24Rik - RIKEN cDNA B230216N24 gene ncRNA unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-5 chr16 95767621 95768114 + 2.45535166244229 NA Intergenic Intergenic 65460 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-2 chr10 78718102 78718716 + 2.45535166244229 NA promoter-TSS (NM_009809) promoter-TSS (NM_009809) -116 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-11 chr7 78915777 78916580 + 2.45535166244229 NA intron (NM_001113527, intron 1 of 2) intron (NM_001113527, intron 1 of 2) 1943 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding unique_peak2_12_31_-1.56740684597164_4.21629657701418_2.45535166244229-3 chr7 90304083 90304506 + 2.45535166244229 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 1939 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229 chr2 145862317 145862606 + 2.45535166244229 NA intron (NM_028724, intron 9 of 12) intron (NM_028724, intron 9 of 12) -40780 NM_026425 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-6 chr19 4334981 4335427 + 2.45535166244229 NA intron (NM_001001984, intron 12 of 20) RSINE1|SINE|B4 -28982 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding unique_peak1_36_11_1.34599824033629_4.2579616208893_2.45535166244229-3 chr11 51650433 51650776 + 2.45535166244229 NA promoter-TSS (NR_027958) promoter-TSS (NR_027958) -350 NR_027958 97775 Mm.220299 NM_175289 ENSMUSG00000052563 D930048N14Rik AI315703|R75254 RIKEN cDNA D930048N14 gene ncRNA common_peak2_12_31_-1.56740684597164_4.21629657701418_2.45535166244229-3 chr19 46458747 46459045 + 2.45535166244229 NA intron (NM_001025391, intron 8 of 11) intron (NM_001025391, intron 8 of 11) -42752 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_37_11_1.38420095382399_4.27706297763315_2.45535166244229-3 chr13 71961842 71962487 + 2.45535166244229 NA intron (NM_010573, intron 1 of 3) intron (NM_010573, intron 1 of 3) 1559 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778 chr11 75458125 75458747 + 2.45517123152778 NA Intergenic Intergenic -3103 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA unique_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778-4 chr6 52011751 52012477 + 2.45517123152778 NA intron (NM_018773, intron 1 of 12) intron (NM_018773, intron 1 of 12) 435 NM_018773 54353 Mm.221479 NM_018773 ENSMUSG00000059182 Skap2 2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R src family associated phosphoprotein 2 protein-coding common_peak2_18_39_-1.34570966076897_4.64907326450288_2.45517123152778 chr6 72486968 72487812 + 2.45517123152778 NA Intergenic Intergenic -47832 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding unique_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778 chr1 191575765 191576001 + 2.45517123152778 NA promoter-TSS (NM_029766) promoter-TSS (NM_029766) 247 NM_001306204 77065 Mm.338175 NM_178632 ENSMUSG00000037461 Ints7 5930412E23Rik|int7 integrator complex subunit 7 protein-coding common_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778-3 chr9 56927375 56927949 + 2.45517123152778 NA 5' UTR (NM_175483, exon 1 of 2) 5' UTR (NM_175483, exon 1 of 2) 709 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding unique_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778-2 chr11 4118016 4118927 + 2.45517123152778 NA intron (NM_144520, intron 1 of 11) CpG 258 NM_144520 67815 Mm.253922 NM_144520 ENSMUSG00000003585 Sec14l2 1300013M05Rik|Spf|TAP SEC14-like lipid binding 2 protein-coding common_peak1_18_39_-1.34570966076897_4.64907326450288_2.45517123152778 chr13 54468255 54468785 + 2.45517123152778 NA intron (NM_028597, intron 1 of 5) CpG 320 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 protein-coding unique_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778-5 chrX 97373584 97374507 + 2.45517123152778 NA intron (NM_001161432, intron 1 of 7) intron (NM_001161432, intron 1 of 7) 3164 NM_001161432 245527 Mm.189270 NM_175540 ENSMUSG00000034457 Eda2r 9430060M22Rik|TNFRSF27|Xedar ectodysplasin A2 receptor protein-coding common_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778-2 chr18 42061411 42061872 + 2.45517123152778 NA intron (NM_172966, intron 1 of 7) intron (NM_172966, intron 1 of 7) 7931 NM_001146299 269016 Mm.45472 NM_172966 ENSMUSG00000057719 Sh3rf2 2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158 SH3 domain containing ring finger 2 protein-coding unique_peak1_46_16_1.18619846205172_4.6805620722762_2.45517123152778-3 chr19 7301567 7302040 + 2.45517123152778 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -6356 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding unique_peak2_18_39_-1.34570966076897_4.64907326450288_2.45517123152778-2 chr18 32446435 32447250 + 2.45517123152778 NA Intergenic Intergenic -68558 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_18_39_-1.34570966076897_4.64907326450288_2.45517123152778-2 chr7 28810977 28811241 + 2.45517123152778 NA exon (NM_177301, exon 1 of 13) exon (NM_177301, exon 1 of 13) 219 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding unique_peak2_18_39_-1.34570966076897_4.64907326450288_2.45517123152778 chr15 74960410 74960935 + 2.45517123152778 NA TTS (NM_001164036) TTS (NM_001164036) 5566 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_141_169_-0.551825174004214_7.1334783491356_2.45377348750653 chr4 138972124 138973973 + 2.45377348750653 NA 5' UTR (NM_029857, exon 1 of 17) 5' UTR (NM_029857, exon 1 of 17) 143 NM_029857 77056 Mm.122336 NM_029857 ENSMUSG00000041143 Tmco4 4632413C14Rik|AI430825 transmembrane and coiled-coil domains 4 protein-coding common_peak1_57_22_1.05135106532025_5.04923748871714_2.44914526326141 chr3 58646524 58646968 + 2.44914526326141 NA Intergenic Intergenic -5296 NR_004433 666680 Mm.422212 NR_004433 Gm8234 AU022133 spermine synthase pseudogene pseudo common_peak2_57_22_1.05135106532025_5.04923748871714_2.44914526326141 chr8 78716044 78716397 + 2.44914526326141 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 104932 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_57_22_1.05135106532025_5.04923748871714_2.44914526326141-2 chr4 89057497 89057844 + 2.44914526326141 NA intron (NR_033533, intron 2 of 2) intron (NR_033533, intron 2 of 2) 7363 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak1_57_22_1.05135106532025_5.04923748871714_2.44914526326141-3 chr5 135994913 135995622 + 2.44914526326141 NA 5' UTR (NM_001256097, exon 2 of 11) 5' UTR (NM_001256097, exon 2 of 11) 467 NM_001256098 74198 Mm.275574 NM_023742 ENSMUSG00000004947 Dtx2 2610524D08Rik|AA408415|AU022494|Deltex2 deltex 2, E3 ubiquitin ligase protein-coding common_peak2_26_48_-1.13510801364181_5.04715583729431_2.44914526326141 chr3 119956402 119956866 + 2.44914526326141 NA Intergenic Intergenic -173246 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_58_22_1.07583912926567_5.06148152068985_2.44914526326141 chr10 52381623 52382015 + 2.44914526326141 NA exon (NM_001199272, exon 1 of 9) exon (NM_001199272, exon 1 of 9) 305 NM_053187 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding common_peak2_26_48_-1.13510801364181_5.04715583729431_2.44914526326141-2 chr5 100038529 100038914 + 2.44914526326141 NA exon (NM_016690, exon 1 of 8) exon (NM_016690, exon 1 of 8) 501 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding common_peak1_58_22_1.07583912926567_5.06148152068985_2.44914526326141 chr16 45870609 45871394 + 2.44914526326141 NA Intergenic Intergenic -26250 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_135_69_0.666437881244997_6.46250195756746_2.4488162027751 chr16 43247378 43248664 + 2.4488162027751 NA intron (NM_181058, intron 1 of 6) intron (NM_181058, intron 1 of 6) 737 NM_019778 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288 zinc finger and BTB domain containing 20 protein-coding common_peak1_295_176_0.442190252254711_7.68870067621035_2.44761019723106 chr3 51559805 51561739 + 2.44761019723106 NA promoter-TSS (NM_080793) promoter-TSS (NM_080793) 51 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding unique_peak2_21_42_-1.24003437253179_4.8062475684362_2.44513000105558-2 chr19 41829712 41830325 + 2.44513000105558 NA promoter-TSS (NM_008043) promoter-TSS (NM_008043) 48 NM_008043 14296 Mm.4573 NM_008043 ENSMUSG00000067199 Frat1 AW060382 frequently rearranged in advanced T cell lymphomas protein-coding common_peak1_21_42_-1.24003437253179_4.8062475684362_2.44513000105558 chr18 66330911 66331181 + 2.44513000105558 NA Intergenic Intergenic -39208 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak2_21_42_-1.24003437253179_4.8062475684362_2.44513000105558 chr14 54227561 54228273 + 2.44513000105558 NA Intergenic Intergenic 26012 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_50_18_1.14273894612032_4.81929698650375_2.44513000105557-3 chr13 33951698 33952185 + 2.44513000105557 NA intron (NR_040707, intron 1 of 4) intron (NR_040707, intron 1 of 4) -12718 NM_001163239 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 N-ribosyldihydronicotinamide quinone reductase 2 protein-coding common_peak2_50_18_1.14273894612032_4.81929698650375_2.44513000105557 chr11 78094776 78095203 + 2.44513000105557 NA intron (NM_145430, intron 1 of 2) intron (NM_145430, intron 1 of 2) 316 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding common_peak1_50_18_1.14273894612032_4.81929698650375_2.44513000105557 chr12 111663796 111664505 + 2.44513000105557 NA Intergenic Intergenic 8188 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding common_peak2_50_18_1.14273894612032_4.81929698650375_2.44513000105557-2 chr16 33830027 33830387 + 2.44513000105557 NA intron (NM_001145884, intron 1 of 14) CpG 542 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_50_18_1.14273894612032_4.81929698650375_2.44513000105557-2 chr12 104999866 105000583 + 2.44513000105557 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -1547 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak1_50_18_1.14273894612032_4.81929698650375_2.44513000105557 chr1 21001629 21002252 + 2.44513000105557 NA intron (NM_177409, intron 10 of 10) intron (NM_177409, intron 10 of 10) 50314 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding unique_peak1_50_18_1.14273894612032_4.81929698650375_2.44513000105557-4 chr17 46266468 46267374 + 2.44513000105557 NA intron (NM_001252475, intron 1 of 8) intron (NM_001252475, intron 1 of 8) 12756 NM_001111142 224813 Mm.70999 NM_001111142 ENSMUSG00000071073 Lrrc73 Gm88 leucine rich repeat containing 73 protein-coding common_peak1_78_34_0.88828464933031_5.57342534161012_2.44476666246295-3 chr19 60889234 60890176 + 2.44476666246295 NA promoter-TSS (NM_018869) promoter-TSS (NM_018869) -44 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_78_34_0.88828464933031_5.57342534161012_2.44476666246295-2 chr18 24204983 24205698 + 2.44476666246295 NA promoter-TSS (NM_013814) promoter-TSS (NM_013814) -4 NM_013814 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - polypeptide N-acetylgalactosaminyltransferase 1 protein-coding common_peak1_78_34_0.88828464933031_5.57342534161012_2.44476666246295-4 chrX 159650342 159651015 + 2.44476666246295 NA intron (NM_001135727, intron 1 of 17) intron (NM_001135727, intron 1 of 17) 23406 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_78_34_0.88828464933031_5.57342534161012_2.44476666246295 chr10 91157559 91158464 + 2.44476666246295 NA intron (NM_001080129, intron 4 of 8) B1F2|SINE|Alu 12539 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_160_85_0.611192617095042_6.73186106324962_2.44464722710275 chr9 114688331 114689724 + 2.44464722710275 NA exon (NM_146229, exon 1 of 13) exon (NM_146229, exon 1 of 13) 196 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding common_peak2_103_131_-0.632965904049829_6.72791116733354_2.44464722710273 chr4 116220710 116222203 + 2.44464722710273 NA promoter-TSS (NM_001355584) promoter-TSS (NM_001355584) 40 NM_001355585 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55|p55pik phosphoinositide-3-kinase regulatory subunit 3 protein-coding common_peak1_54_20_1.10651487857218_4.94557486206485_2.44377456520723-2 chr14 66257177 66257749 + 2.44377456520723 NA intron (NM_001162366, intron 1 of 30) B3|SINE|B2 23589 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_54_20_1.10651487857218_4.94557486206485_2.44377456520723-3 chr17 26497597 26498122 + 2.44377456520723 NA Intergenic Intergenic 10613 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_54_20_1.10651487857218_4.94557486206485_2.44377456520723 chr10 67785859 67786434 + 2.44377456520723 NA Intergenic Intergenic 126516 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak1_54_20_1.10651487857218_4.94557486206485_2.44377456520723 chr17 45796854 45798107 + 2.44377456520723 NA Intergenic Intergenic 62974 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_113_55_0.735589155141753_6.17514949962848_2.44359761317894 chr18 12643206 12644311 + 2.44359761317894 NA 5' UTR (NM_028341, exon 1 of 14) 5' UTR (NM_028341, exon 1 of 14) 225 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_113_55_0.735589155141753_6.17514949962848_2.44359761317894-2 chr8 105565291 105566039 + 2.44359761317894 NA intron (NM_013477, intron 1 of 7) CpG 399 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-8 chr2 155807295 155807484 + 2.44150343356329 NA intron (NM_010808, intron 4 of 8) intron (NM_010808, intron 4 of 8) 11814 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA unique_peak2_7_24_-1.90676116598368_3.69047560678288_2.44150343356329 chr8 70564432 70564859 + 2.44150343356329 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 24970 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-11 chr3 66981217 66981556 + 2.44150343356329 NA promoter-TSS (NM_001302359) promoter-TSS (NM_001302359) -245 NM_001302359 20429 Mm.39093 NM_013665 ENSMUSG00000027833 Shox2 6330543G17Rik|OG12|Og12x|Prx3|SHOT short stature homeobox 2 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-12 chr5 34663892 34664528 + 2.44150343356329 NA intron (NM_001080743, intron 1 of 5) MTC|LTR|ERVL-MaLR 3831 NM_019497 14772 Mm.117076 NM_019497 ENSMUSG00000052783 Grk4 A830025H08Rik|GRK|Gprk2l|Gprk4 G protein-coupled receptor kinase 4 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-4 chr15 61454136 61454458 + 2.44150343356329 NA Intergenic Intergenic 320154 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak2_8_24_-1.73803498195553_3.77483869879696_2.44150343356329-4 chr9 103040735 103041183 + 2.44150343356329 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 32470 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-13 chr6 48554335 48554703 + 2.44150343356329 NA promoter-TSS (NM_177736) promoter-TSS (NM_177736) -280 NM_001110160 243371 Mm.290764 NM_177736 ENSMUSG00000073096 Lrrc61 BC027309 leucine rich repeat containing 61 protein-coding unique_peak2_8_24_-1.73803498195553_3.77483869879696_2.44150343356329-3 chr7 130143203 130143519 + 2.44150343356329 NA Intergenic Intergenic 123447 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-14 chr8 70714918 70715271 + 2.44150343356329 NA Intergenic Intergenic -3449 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding unique_peak2_8_24_-1.73803498195553_3.77483869879696_2.44150343356329-2 chr6 134043948 134044358 + 2.44150343356329 NA intron (NM_007961, intron 1 of 7) intron (NM_007961, intron 1 of 7) 8453 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-2 chr1 93129173 93129654 + 2.44150343356329 NA Intergenic Intergenic -5827 NM_001276710 11611 Mm.7457 NM_016702 ENSMUSG00000026272 Agxt AGT|Agt1|Agxt1|SPT alanine-glyoxylate aminotransferase protein-coding unique_peak2_8_24_-1.73803498195553_3.77483869879696_2.44150343356329 chr12 52097759 52097991 + 2.44150343356329 NA exon (NM_029760, exon 1 of 11) exon (NM_029760, exon 1 of 11) 129 NM_029760 76826 Mm.244781 NM_029760 ENSMUSG00000035142 Nubpl 2410170E07Rik nucleotide binding protein-like protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-9 chr2 155820171 155820548 + 2.44150343356329 NA intron (NM_010579, intron 5 of 5) intron (NM_010579, intron 5 of 5) -1156 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_7_24_-1.90676116598368_3.69047560678288_2.44150343356329 chr4 107179622 107179883 + 2.44150343356329 NA intron (NM_029565, intron 1 of 7) intron (NM_029565, intron 1 of 7) 1122 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-5 chr15 80350718 80350979 + 2.44150343356329 NA intron (NM_001044308, intron 6 of 36) intron (NM_001044308, intron 6 of 36) 63610 NM_001044308 239556 Mm.291058 NM_001044308 ENSMUSG00000022416 Cacna1i Ca(V)3.3 calcium channel, voltage-dependent, alpha 1I subunit protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329 chr1 89116500 89116851 + 2.44150343356329 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 46260 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-6 chr19 3680715 3681200 + 2.44150343356329 NA intron (NM_008513, intron 1 of 22) intron (NM_008513, intron 1 of 22) 5607 NM_008513 16973 Mm.274581 NM_008513 ENSMUSG00000024913 Lrp5 BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142 low density lipoprotein receptor-related protein 5 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-7 chr19 43886684 43887012 + 2.44150343356329 NA intron (NM_028029, intron 4 of 15) intron (NM_028029, intron 4 of 15) -7080 NM_001306088 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding unique_peak2_7_24_-1.90676116598368_3.69047560678288_2.44150343356329-2 chr9 41599493 41599882 + 2.44150343356329 NA intron (NR_131930, intron 3 of 3) intron (NR_131930, intron 3 of 3) 17761 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-10 chr2 167551621 167551997 + 2.44150343356329 NA Intergenic Intergenic 13614 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_28_7_1.58196800095051_3.79098400047526_2.44150343356329-3 chr14 70107422 70107777 + 2.44150343356329 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 7506 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding common_peak1_74_102_-0.743366062803456_6.31481749578149_2.44106047334173 chr9 102716719 102717504 + 2.44106047334173 NA promoter-TSS (NM_019764) promoter-TSS (NM_019764) -693 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_75_102_-0.724392052211316_6.32430450107756_2.44106047334173 chr10 77259275 77259861 + 2.44106047334173 NA promoter-TSS (NR_026944) promoter-TSS (NR_026944) 268 NM_030262 80294 Mm.203556 NM_030262 ENSMUSG00000020260 Pofut2 2310011G23Rik|AI256847|BC003494|C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding common_peak1_124_62_0.697620857833027_6.32609035241643_2.44106047334172 chr3 121616410 121617401 + 2.44106047334172 NA Intergenic MLT2B4|LTR|ERVL 26580 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_34_58_-1.03128705681604_5.36699952095382_2.44083020633064 chr1 91815456 91816502 + 2.44083020633064 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 14518 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak1_70_29_0.957730146098212_5.38575566865762_2.44083020633064 chr11 78094613 78095418 + 2.44083020633064 NA intron (NM_145430, intron 1 of 2) intron (NM_145430, intron 1 of 2) 342 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-21 chr13 51526182 51526404 + 2.4322161449009 NA intron (NM_009167, intron 1 of 11) intron (NM_009167, intron 1 of 11) 40791 NM_009167 20418 Mm.131870 NM_009167 ENSMUSG00000021448 Shc3 N-Shc|Rai|ShcC src homology 2 domain-containing transforming protein C3 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-5 chr11 61954677 61954882 + 2.4322161449009 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -1984 NM_001281818 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-4 chr10 19525614 19525911 + 2.4322161449009 NA Intergenic Intergenic 31119 NR_152785 102635880 Mm.331974 NR_152784 ENSMUSG00000110902 Gm33104 - predicted gene, 33104 ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-12 chr10 120222344 120222699 + 2.4322161449009 NA intron (NM_026617, intron 5 of 6) intron (NM_026617, intron 5 of 6) -4539 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-63 chrX 56651982 56652324 + 2.4322161449009 NA intron (NM_172780, intron 13 of 15) intron (NM_172780, intron 13 of 15) 42318 NM_172780 236794 Mm.17815 NM_172780 ENSMUSG00000060681 Slc9a6 3732426M05|6430520C02Rik|NHE6|mKIAA0267 solute carrier family 9 (sodium/hydrogen exchanger), member 6 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-51 chr6 54956282 54956555 + 2.4322161449009 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 15243 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009 chr1 21054614 21054835 + 2.4322161449009 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 24501 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-29 chr17 73808316 73808570 + 2.4322161449009 NA intron (NM_020578, intron 1 of 5) intron (NM_020578, intron 1 of 5) 3602 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-18 chr6 89814279 89814509 + 2.4322161449009 NA Intergenic Intergenic 31221 NM_053221 113848 Mm.349358 NM_053221 ENSMUSG00000068232 Vmn1r42 V1ra1|V1ra3|V1ra6 vomeronasal 1 receptor 42 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-30 chr17 84108295 84108518 + 2.4322161449009 NA Intergenic Intergenic 29746 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-24 chr15 99403089 99403376 + 2.4322161449009 NA intron (NM_001171035, intron 3 of 9) intron (NM_001171035, intron 3 of 9) 10013 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-13 chr11 16811583 16811794 + 2.4322161449009 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 59485 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-11 chr16 11027750 11028044 + 2.4322161449009 NA Intergenic Intergenic 18999 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-25 chr9 75541030 75541231 + 2.4322161449009 NA intron (NM_001357828, intron 1 of 10) B1_Mur1|SINE|Alu 18527 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-26 chr17 30189898 30190275 + 2.4322161449009 NA intron (NM_001356265, intron 4 of 5) intron (NM_001356265, intron 4 of 5) 185047 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-47 chr4 154964640 154964827 + 2.4322161449009 NA intron (NM_172990, intron 1 of 18) CpG 610 NR_131230 269614 Mm.30042 NM_172990 ENSMUSG00000029056 Pank4 D030031I12Rik|R75150 pantothenate kinase 4 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-49 chr5 136635121 136635478 + 2.4322161449009 NA Intergenic B1F|SINE|Alu -57847 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-52 chr6 88985715 88986007 + 2.4322161449009 NA Intergenic Intergenic 83610 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009 chr11 72500002 72500294 + 2.4322161449009 NA intron (NM_029932, intron 9 of 11) MIR|SINE|MIR -10228 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-16 chr11 96280010 96280248 + 2.4322161449009 NA Intergenic Intergenic -1776 NM_010461 15416 Mm.4822 NM_010461 ENSMUSG00000056648 Hoxb8 Hox-2.4 homeobox B8 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-19 chr7 145251017 145251510 + 2.4322161449009 NA intron (NR_132644, intron 24 of 24) intron (NR_132644, intron 24 of 24) 32748 NR_132644 233979 Mm.102235 NM_146206 ENSMUSG00000048677 Tpcn2 D830047E22Rik|Gm35086 two pore segment channel 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-8 chr1 193405933 193406162 + 2.4322161449009 NA Intergenic Intergenic -35765 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-19 chr12 77137808 77138059 + 2.4322161449009 NA Intergenic Intergenic -100171 NM_001252614 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-31 chr19 43523014 43523305 + 2.4322161449009 NA intron (NM_010324, intron 1 of 8) RLTR31D_MM|LTR|ERVK 1446 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-22 chr8 108900583 108900868 + 2.4322161449009 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -36135 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-64 chrX 106188225 106188459 + 2.4322161449009 NA intron (NM_008828, intron 1 of 10) intron (NM_008828, intron 1 of 10) 1242 NM_008828 18655 Mm.316355 NM_008828 ENSMUSG00000062070 Pgk1 Pgk-1 phosphoglycerate kinase 1 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-7 chr12 98289253 98289524 + 2.4322161449009 NA Intergenic Intergenic 20753 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-4 chr1 164481138 164481367 + 2.4322161449009 NA Intergenic Intergenic -22055 NR_151593 102635083 Mm.98705 NR_151593 ENSMUSG00000097281 Gm26685 - predicted gene, 26685 ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-37 chr2 141434858 141435111 + 2.4322161449009 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -763508 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-16 chr5 64390816 64391219 + 2.4322161449009 NA Intergenic Intergenic 76925 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-3 chr1 155232936 155233298 + 2.4322161449009 NA Intergenic Intergenic 74414 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-15 chr11 77802412 77802691 + 2.4322161449009 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 1253 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-32 chr19 55569152 55569395 + 2.4322161449009 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 132931 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-18 chr12 73778535 73778776 + 2.4322161449009 NA TTS (NM_001313977) TTS (NM_001313977) -122669 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-8 chr13 46218120 46218396 + 2.4322161449009 NA Intergenic Intergenic -55463 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-54 chr6 146914480 146914688 + 2.4322161449009 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 26090 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-38 chr2 174026036 174026408 + 2.4322161449009 NA Intergenic Intergenic -50829 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-43 chr4 107496578 107496804 + 2.4322161449009 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 61972 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-61 chr9 47281644 47281974 + 2.4322161449009 NA Intergenic Intergenic -248361 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-20 chr12 100373194 100373432 + 2.4322161449009 NA intron (NM_001033213, intron 15 of 19) intron (NM_001033213, intron 15 of 19) 96704 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-17 chr6 33873513 33873828 + 2.4322161449009 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -155778 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-22 chr14 61172392 61172617 + 2.4322161449009 NA intron (NM_172809, intron 2 of 9) intron (NM_172809, intron 2 of 9) 34047 NM_015788 50720 Mm.440703 NM_015788 ENSMUSG00000048279 Sacs A230052M14|DNAJC29|E130115J16Rik sacsin protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-24 chr9 63712270 63712489 + 2.4322161449009 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 45615 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-33 chr2 29652478 29652780 + 2.4322161449009 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 32909 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-39 chr3 30261977 30262230 + 2.4322161449009 NA intron (NM_001361034, intron 1 of 16) intron (NM_001361034, intron 1 of 16) 247572 NM_001361034 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-53 chr6 135295215 135295508 + 2.4322161449009 NA Intergenic Intergenic 15023 NM_029595 76400 Mm.293018 NM_029595 ENSMUSG00000047104 Pbp2 1700023A18Rik|AI326308|Pebp-2|Pebp2 phosphatidylethanolamine binding protein 2 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-14 chr17 72976730 72976938 + 2.4322161449009 NA Intergenic Intergenic 58529 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-44 chr4 117883733 117884083 + 2.4322161449009 NA promoter-TSS (NM_001253381) promoter-TSS (NM_001253381) -432 NM_001253381 53418 Mm.123843 NM_017377 ENSMUSG00000028541 B4galt2 Ggtb2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009 chr1 72211892 72212111 + 2.4322161449009 NA intron (NM_001357488, intron 1 of 5) CpG 306 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-48 chr5 26822953 26823351 + 2.4322161449009 NA intron (NM_010075, intron 1 of 25) intron (NM_010075, intron 1 of 25) 5795 NM_010075 13483 Mm.42078 NM_010075 ENSMUSG00000061576 Dpp6 B930011P16Rik|D5Buc3|D5Buc4|D5Buc5|DPP VI|Dpp-6|Gm1377|In(5)6H-p|Peplb|Rw dipeptidylpeptidase 6 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-23 chr15 53064887 53065234 + 2.4322161449009 NA Intergenic Intergenic 281123 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-62 chr9 94455857 94456060 + 2.4322161449009 NA Intergenic Intergenic 82123 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-56 chr7 90332436 90332654 + 2.4322161449009 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 30190 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-25 chr15 100761914 100762203 + 2.4322161449009 NA intron (NM_021530, intron 1 of 24) CpG 311 NM_021530 59033 Mm.209856 NM_021530 ENSMUSG00000023032 Slc4a8 AW493845|C230026C11|NDCBE|kNBC-3 solute carrier family 4 (anion exchanger), member 8 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-57 chr7 90370205 90370427 + 2.4322161449009 NA intron (NM_001040085, intron 4 of 18) intron (NM_001040085, intron 4 of 18) -16665 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-34 chr2 45288283 45288620 + 2.4322161449009 NA Intergenic Intergenic -171009 NM_001355288 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-45 chr4 145236616 145236848 + 2.4322161449009 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 10138 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-9 chr15 77791891 77792214 + 2.4322161449009 NA intron (NM_022410, intron 6 of 40) intron (NM_022410, intron 6 of 40) -35042 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-21 chr8 13516599 13516834 + 2.4322161449009 NA Intergenic Intergenic -22181 NM_019521 14456 Mm.3982 NM_019521 ENSMUSG00000031451 Gas6 Gas-6 growth arrest specific 6 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-15 chr19 34252037 34252287 + 2.4322161449009 NA intron (NM_007392, intron 2 of 8) intron (NM_007392, intron 2 of 8) 3211 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-5 chr1 180350861 180351049 + 2.4322161449009 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -20406 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-6 chr12 29019942 29020312 + 2.4322161449009 NA intron (NR_154989, intron 1 of 2) intron (NR_154989, intron 1 of 2) 109898 NR_154989 102633758 Mm.110243 NR_154989 Gm31508 - predicted gene, 31508 ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-35 chr2 125299567 125299890 + 2.4322161449009 NA TTS (NM_007993) TTS (NM_007993) 52213 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-46 chr4 148521280 148521656 + 2.4322161449009 NA intron (NM_020009, intron 31 of 57) intron (NM_020009, intron 31 of 57) -21006 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-11 chr10 81294170 81294577 + 2.4322161449009 NA intron (NM_001293647, intron 1 of 17) intron (NM_001293647, intron 1 of 17) 1410 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-59 chr8 45720578 45720851 + 2.4322161449009 NA intron (NM_001310708, intron 1 of 19) L2b|LINE|L2 58721 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-55 chr7 67244681 67245072 + 2.4322161449009 NA intron (NM_001357324, intron 8 of 11) intron (NM_001357324, intron 8 of 11) 22260 NM_001191051 75099 Mm.121691 NM_175215 ENSMUSG00000043831 Lysmd4 4930506D23Rik LysM, putative peptidoglycan-binding, domain containing 4 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-2 chr1 128398840 128399065 + 2.4322161449009 NA intron (NM_177445, intron 4 of 15) intron (NM_177445, intron 4 of 15) 18464 NM_177445 226414 Mm.28693 NM_145507 ENSMUSG00000026356 Dars 5730439G15Rik aspartyl-tRNA synthetase protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-12 chr17 5846707 5846916 + 2.4322161449009 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 5431 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-41 chr4 31940917 31941197 + 2.4322161449009 NA Intergenic Intergenic -23050 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-60 chr9 21926436 21926660 + 2.4322161449009 NA promoter-TSS (NM_001164614) promoter-TSS (NM_001164614) 740 NM_001253869 235043 Mm.253329 NM_178577 ENSMUSG00000040883 Tmem205 - transmembrane protein 205 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-10 chr10 30803447 30803764 + 2.4322161449009 NA promoter-TSS (NM_001358841) promoter-TSS (NM_001358841) -279 NM_001358842 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-36 chr2 129175579 129175811 + 2.4322161449009 NA Intergenic Intergenic 4978 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 - expressed sequence AI847159 ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-27 chr17 56989918 56990174 + 2.4322161449009 NA promoter-TSS (NM_017393) promoter-TSS (NM_017393) -218 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-23 chr9 6305260 6305609 + 2.4322161449009 NA intron (NM_001357397, intron 3 of 6) intron (NM_001357397, intron 3 of 6) -38887 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-65 chrX 169359055 169359404 + 2.4322161449009 NA intron (NM_001361166, intron 4 of 5) intron (NM_001361166, intron 4 of 5) 38834 NM_001361166 101055907 NM_001361166 Gm15246 - predicted gene 15246 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-13 chr17 34589303 34589611 + 2.4322161449009 NA promoter-TSS (NM_134116) promoter-TSS (NM_134116) -349 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-7 chr1 193326619 193326861 + 2.4322161449009 NA intron (NM_008484, intron 8 of 22) intron (NM_008484, intron 8 of 22) 24497 NM_001277928 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-42 chr4 32518101 32518316 + 2.4322161449009 NA intron (NM_001109661, intron 2 of 4) PB1|SINE|Alu 53454 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-2 chr10 6849493 6849875 + 2.4322161449009 NA intron (NM_001302796, intron 3 of 4) intron (NM_001302796, intron 3 of 4) 61108 NM_001039652 18390 Mm.438000 NM_011013 ENSMUSG00000000766 Oprm1 M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR opioid receptor, mu 1 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-20 chr8 9000334 9000589 + 2.4322161449009 NA Intergenic Intergenic 131827 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-28 chr17 66376449 66376636 + 2.4322161449009 NA intron (NM_172963, intron 6 of 13) intron (NM_172963, intron 6 of 13) 73208 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-40 chr3 84694213 84694444 + 2.4322161449009 NA intron (NM_177260, intron 6 of 6) intron (NM_177260, intron 6 of 6) 28136 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-14 chr11 59333126 59333405 + 2.4322161449009 NA 3' UTR (NM_139298, exon 4 of 4) 3' UTR (NM_139298, exon 4 of 4) 26335 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-58 chr7 112716242 112716504 + 2.4322161449009 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 37053 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-3 chr10 12963111 12963319 + 2.4322161449009 NA intron (NM_029075, intron 1 of 2) intron (NM_029075, intron 1 of 2) 1044 NM_029075 74732 Mm.248648 NM_029075 ENSMUSG00000039232 Stx11 5830405C08Rik syntaxin 11 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-9 chr10 27117482 27117804 + 2.4322161449009 NA intron (NM_008481, intron 37 of 63) G-rich|Low_complexity|Low_complexity -272223 NR_131034 75855 Mm.402080 NR_131034 ENSMUSG00000101636 4930579H20Rik - RIKEN cDNA 4930579H20 gene ncRNA unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-17 chr12 16999543 16999739 + 2.4322161449009 NA intron (NM_172574, intron 1 of 6) intron (NM_172574, intron 1 of 6) 477 NM_172574 217430 Mm.379451 NM_172574 ENSMUSG00000045679 Pqlc3 C78076|E030024M05Rik PQ loop repeat containing protein-coding unique_peak2_4_15_-1.93619309788184_3.03190345105908_2.4322161449009-10 chr15 99031601 99031929 + 2.4322161449009 NA intron (NM_009448, intron 1 of 3) intron (NM_009448, intron 1 of 3) 1874 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-6 chr1 182521547 182521837 + 2.4322161449009 NA Intergenic Intergenic -4082 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak1_17_4_1.57683813335859_3.11034716156666_2.4322161449009-50 chr6 17109454 17109763 + 2.4322161449009 NA intron (NR_153844, intron 1 of 2) intron (NR_153844, intron 1 of 2) 44459 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_44_69_-0.917914869518382_5.67032558218578_2.43183886932982 chr13 52079011 52079627 + 2.43183886932982 NA Intergenic Intergenic -17422 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak1_83_37_0.857552203002551_5.67670361494486_2.43183886932981 chr8 124948115 124948981 + 2.43183886932981 NA exon (NM_053207, exon 1 of 5) exon (NM_053207, exon 1 of 5) 706 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak1_83_37_0.857552203002551_5.67670361494486_2.43183886932981 chr15 36496184 36496749 + 2.43183886932981 NA 5' UTR (NM_001358006, exon 1 of 5) 5' UTR (NM_001358006, exon 1 of 5) 268 NM_001358007 68839 Mm.396537 NM_175134 ENSMUSG00000048307 Ankrd46 1110054N06Rik|AI314978|AI987733 ankyrin repeat domain 46 protein-coding common_peak1_167_90_0.590630096674196_6.80310968853579_2.42951297851575 chr2 131491627 131493119 + 2.42951297851575 NA intron (NM_001177840, intron 1 of 3) CpG 511 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_109_137_-0.616747135000475_6.80015088927793_2.42951297851575 chr13 91807098 91807978 + 2.42951297851575 NA intron (NM_145453, intron 1 of 5) CpG 158 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak2_225_249_-0.44251656257508_7.74452600337455_2.42787585775377 chr8 128358243 128360848 + 2.42787585775377 NA TTS (NR_035436) TTS (NR_035436) 304 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_59_85_-0.802787189076213_6.02487116016399_2.42722304086532 chr17 79744559 79745386 + 2.42722304086532 NA Intergenic Intergenic -29931 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_210_235_-0.457756095203205_7.65376500176024_2.42715417819624 chr9 6666021 6669320 + 2.42715417819624 NA Intergenic Intergenic -401123 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_119_59_0.709531990444122_6.26165659083058_2.42691799141036 chr19 38590731 38592309 + 2.42691799141036 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 67323 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak2_85_112_-0.680991411778999_6.47968325652569_2.42477793328327 chr16 45093020 45095177 + 2.42477793328327 NA promoter-TSS (NM_026439) promoter-TSS (NM_026439) 87 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_88_40_0.830755221781843_5.77292961550901_2.42452383397919 chr15 25621415 25622184 + 2.42452383397919 NA promoter-TSS (NM_019472) promoter-TSS (NM_019472) -751 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_51_77_-0.86691902398038_5.85194270687206_2.42180937783011 chr15 39047840 39048369 + 2.42180937783011 NA Intergenic Intergenic -28828 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak1_154_82_0.608012027386492_6.67904544504017_2.42153374909703 chr10 88731141 88732638 + 2.42153374909703 NA promoter-TSS (NM_001037166) promoter-TSS (NM_001037166) 475 NM_025859 104303 Mm.291247 NM_025859 ENSMUSG00000060904 Arl1 2310008D22Rik|AU019749 ADP-ribosylation factor-like 1 protein-coding common_peak1_148_78_0.622716648348163_6.61513907235118_2.42030834784074 chr8 109736809 109737689 + 2.42030834784074 NA intron (NM_001080930, intron 1 of 3) intron (NM_001080930, intron 1 of 3) 490 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding common_peak2_32_55_-1.04028893765985_5.28721045322768_2.41952329912177 chr8 33897298 33897955 + 2.41952329912177 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 32237 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_66_27_0.974198095582784_5.294453969849_2.41952329912175 chr4 138043269 138044388 + 2.41952329912175 NA intron (NM_001355699, intron 1 of 32) intron (NM_001355699, intron 1 of 32) 46003 NM_001355700 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding unique_peak1_66_27_0.974198095582784_5.294453969849_2.41952329912175 chr2 27442483 27443218 + 2.41952329912175 NA 5' UTR (NM_001360790, exon 1 of 1) 5' UTR (NM_001360790, exon 1 of 1) 414 NM_001360792 100504116 Mm.36529 NM_001360790 Brd3os A230069D13|D2Bwg1423e|Gm20071 bromodomain containing 3, opposite strand protein-coding common_peak1_75_32_0.917714355613449_5.50325129716518_2.41691540483526 chr1 156066424 156067458 + 2.41691540483526 NA 3' UTR (NM_001358627, exon 6 of 6) 3' UTR (NM_001358627, exon 6 of 6) 26080 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak1_74_32_0.898740345021309_5.49376429186911_2.41691540483526 chr19 41671481 41672838 + 2.41691540483526 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 71697 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak1_125_63_0.686315318673591_6.3431576593368_2.41475542144408 chr7 81933110 81934389 + 2.41475542144408 NA intron (NM_013886, intron 1 of 5) CpG 710 NM_013886 29877 Mm.392934 NM_013886 ENSMUSG00000025104 Hdgfl3 2700022B06Rik|HRP-3|Hdgfrp3 HDGF like 3 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-2 chr10 24443803 24444408 + 2.41238722831793 NA Intergenic Intergenic -151337 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793 chr15 83594795 83595082 + 2.41238722831793 NA intron (NM_183017, intron 1 of 13) CpG 219 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-4 chr3 88531601 88532086 + 2.41238722831793 NA promoter-TSS (NM_001029890) promoter-TSS (NM_001029890) -552 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793 chr1 125236734 125237102 + 2.41238722831793 NA Intergenic Intergenic 198809 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-6 chr8 86444943 86445441 + 2.41238722831793 NA Intergenic Intergenic 121398 NM_172912 244562 Mm.67485 NM_172912 ENSMUSG00000036872 Abcc12 4930467B22Rik|MRP9 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-7 chr9 20825357 20825765 + 2.41238722831793 NA exon (NM_001030290, exon 6 of 6) exon (NM_001030290, exon 6 of 6) 7057 NM_001030290 235033 Mm.297661 NM_001030290 ENSMUSG00000053773 Rdh8 Gm182|prRDH retinol dehydrogenase 8 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-3 chr3 33902473 33903346 + 2.41238722831793 NA Intergenic Intergenic -58599 NM_026222 51938 Mm.275710 NM_026222 ENSMUSG00000027676 Ccdc39 4921507O14Rik|AI447426|AI844750|D3Ertd789e|b2b1304Clo|b2b1735Clo|b2b2025.1Clo|prh coiled-coil domain containing 39 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-8 chr9 49919384 49920202 + 2.41238722831793 NA Intergenic Intergenic -120400 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_40_13_1.27065962511608_4.44268473461564_2.41238722831793-5 chr3 103760019 103760656 + 2.41238722831793 NA intron (NM_010432, intron 7 of 15) RSINE1|SINE|B4 -22336 NM_133859 99543 Mm.211535 NM_133859 ENSMUSG00000027848 Olfml3 2810002E22Rik|AI115209|AW550633|HNOEL-iso|ONT3|mONT3 olfactomedin-like 3 protein-coding unique_peak2_15_34_-1.39924297272717_4.42966153058138_2.41238722831792 chr1 59428612 59429159 + 2.41238722831792 NA Intergenic Intergenic -53262 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak2_15_34_-1.39924297272717_4.42966153058138_2.41238722831792-3 chr7 134114575 134114960 + 2.41238722831792 NA intron (NM_007400, intron 3 of 22) intron (NM_007400, intron 3 of 22) 110330 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak2_15_34_-1.39924297272717_4.42966153058138_2.41238722831792-2 chr16 23497231 23497712 + 2.41238722831792 NA intron (NM_001359083, intron 2 of 10) intron (NM_001359083, intron 2 of 10) 23344 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-9 chr15 103382524 103382877 + 2.41165147706372 NA Intergenic PB1D9|SINE|Alu -15909 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-16 chr9 118801985 118802321 + 2.41165147706372 NA intron (NM_001113514, intron 3 of 13) intron (NM_001113514, intron 3 of 13) 90461 NM_001113514 104099 Mm.335520 NM_133721 ENSMUSG00000039115 Itga9 (alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e integrin alpha 9 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-4 chr14 47354408 47354843 + 2.41165147706372 NA Intergenic Intergenic -19235 NM_010705 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-10 chr17 32090921 32091391 + 2.41165147706372 NA non-coding (NR_027316, exon 1 of 9) non-coding (NR_027316, exon 1 of 9) 267 NR_027316 435518 Mm.328944 NR_027316 ENSMUSG00000002791 Pdxk-ps Gm9743 pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene pseudo unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372 chr10 67732856 67733241 + 2.41165147706372 NA Intergenic Intergenic -161089 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak2_6_22_-1.9777529031186_3.53468550449771_2.41165147706372-2 chr4 89474795 89475041 + 2.41165147706372 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -163886 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-11 chr19 12476856 12477219 + 2.41165147706372 NA intron (NM_172442, intron 7 of 8) intron (NM_172442, intron 7 of 8) 16258 NM_010821 17476 Mm.3999 NM_010821 ENSMUSG00000046805 Mpeg1 MPS1|Mpg-1 macrophage expressed gene 1 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-2 chr11 96993261 96993685 + 2.41165147706372 NA Intergenic Intergenic -15785 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding unique_peak2_6_22_-1.9777529031186_3.53468550449771_2.41165147706372-3 chr9 54559733 54560108 + 2.41165147706372 NA intron (NM_019686, intron 1 of 5) intron (NM_019686, intron 1 of 5) 159 NM_019686 56506 Mm.42192 NM_019686 ENSMUSG00000037493 Cib2 2810434I23Rik|AI449053 calcium and integrin binding family member 2 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-8 chr15 100089428 100089644 + 2.41165147706372 NA intron (NR_037311, intron 2 of 3) intron (NR_037311, intron 2 of 3) 50872 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-3 chr12 34039941 34040503 + 2.41165147706372 NA Intergenic Intergenic 82551 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-14 chr4 139216300 139216643 + 2.41165147706372 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 22360 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-6 chr15 77782963 77783410 + 2.41165147706372 NA intron (NM_022410, intron 15 of 40) intron (NM_022410, intron 15 of 40) -26176 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-15 chr8 126383633 126384079 + 2.41165147706372 NA intron (NM_175434, intron 3 of 6) intron (NM_175434, intron 3 of 6) -38645 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-5 chr15 51801796 51802210 + 2.41165147706372 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 63458 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-7 chr15 95795140 95795482 + 2.41165147706372 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 4468 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372 chr10 79840592 79840860 + 2.41165147706372 NA intron (NR_038088, intron 3 of 4) intron (NR_038088, intron 3 of 4) -13706 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-12 chr2 157341839 157342383 + 2.41165147706372 NA intron (NM_010285, intron 1 of 4) intron (NM_010285, intron 1 of 4) 4544 NM_010285 14601 Mm.389327 NM_010285 ENSMUSG00000027643 Ghrh GRF|Ghrf growth hormone releasing hormone protein-coding unique_peak1_26_6_1.6722469084158_3.6434783762655_2.41165147706372-13 chr2 157378522 157379111 + 2.41165147706372 NA intron (NM_026968, intron 1 of 2) intron (NM_026968, intron 1 of 2) 11222 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding unique_peak2_6_22_-1.9777529031186_3.53468550449771_2.41165147706372 chr17 79821299 79821763 + 2.41165147706372 NA Intergenic Intergenic 74592 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak1_203_114_0.531066449473043_7.1110232756809_2.41027567276437 chr19 45005913 45007666 + 2.41027567276437 NA promoter-TSS (NM_053164) promoter-TSS (NM_053164) 231 NM_153796 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding common_peak1_151_178_-0.528762281865598_7.21943463633146_2.40904128422709 chr15 60823032 60824878 + 2.40904128422709 NA non-coding (NR_030696, exon 1 of 3) non-coding (NR_030696, exon 1 of 3) 990 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA common_peak2_121_149_-0.588717600766248_6.93445989011276_2.40861548258581 chr9 108648597 108649947 + 2.40861548258581 NA non-coding (NR_151664, exon 1 of 16) non-coding (NR_151664, exon 1 of 16) 136 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-13 chr13 52685208 52685417 + 2.40823996531185 NA Intergenic Intergenic 71893 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-22 chr2 95632542 95632749 + 2.40823996531185 NA Intergenic Intergenic -685524 NM_001289742 241568 Mm.241682 NM_178725 ENSMUSG00000050587 Lrrc4c 6430556C10Rik|NGL-1 leucine rich repeat containing 4C protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-8 chr11 61091954 61092145 + 2.40823996531185 NA Intergenic Intergenic 26245 NM_010603 16515 Mm.4970 NM_010603 ENSMUSG00000042529 Kcnj12 IRK-2|IRK2|Kir2.2|MB-IRK2 potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185 chr1 16582504 16582703 + 2.40823996531185 NA intron (NM_001271016, intron 4 of 6) intron (NM_001271016, intron 4 of 6) 36735 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-11 chr14 48133527 48133719 + 2.40823996531185 NA intron (NM_033602, intron 1 of 5) intron (NM_033602, intron 1 of 5) 12754 NM_033602 93834 Mm.296457 NM_033602 ENSMUSG00000021846 Peli2 AW047589|BB129927 pellino 2 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-4 chr1 157318698 157318890 + 2.40823996531185 NA intron (NM_177644, intron 1 of 17) intron (NM_177644, intron 1 of 17) -93558 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-3 chr10 34512476 34512694 + 2.40823996531185 NA intron (NM_001358769, intron 2 of 8) intron (NM_001358769, intron 2 of 8) 29185 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-39 chr9 44070745 44070939 + 2.40823996531185 NA intron (NM_016808, intron 1 of 12) intron (NM_016808, intron 1 of 12) 1413 NM_016808 53376 Mm.272770 NM_016808 ENSMUSG00000032010 Usp2 B930035K21Rik|Ubp41 ubiquitin specific peptidase 2 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-25 chr3 9147124 9147345 + 2.40823996531185 NA Intergenic Intergenic 85270 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-8 chr10 69953867 69954165 + 2.40823996531185 NA intron (NM_170729, intron 25 of 40) intron (NM_170729, intron 25 of 40) 28484 NM_009670 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-14 chr14 67061490 67061697 + 2.40823996531185 NA intron (NM_001360033, intron 2 of 10) intron (NM_001360033, intron 2 of 10) 10878 NM_001360034 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-7 chr11 44813334 44813534 + 2.40823996531185 NA intron (NM_001290709, intron 6 of 15) intron (NM_001290709, intron 6 of 15) 195334 NM_001290710 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-34 chr6 140549193 140549435 + 2.40823996531185 NA intron (NM_144920, intron 11 of 30) intron (NM_144920, intron 11 of 30) -73349 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-15 chr14 42134751 42134942 + 2.40823996531185 NA Intergenic Intergenic -39569 NR_073362 73553 Mm.243777 NM_028570 ENSMUSG00000090462 1700091H14Rik 100041930|Gm3578 RIKEN cDNA 1700091H14 gene ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-3 chr1 74388561 74388777 + 2.40823996531185 NA Intergenic Intergenic -2940 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-19 chr16 33863562 33863785 + 2.40823996531185 NA intron (NM_001145884, intron 2 of 14) intron (NM_001145884, intron 2 of 14) 34008 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-17 chr16 24473362 24473558 + 2.40823996531185 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) 25369 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-14 chr14 29087608 29087808 + 2.40823996531185 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 69500 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-44 chr9 119025403 119025641 + 2.40823996531185 NA intron (NM_133710, intron 3 of 7) ID_B1|SINE|B4 -6274 NR_029742 387218 NR_029742 ENSMUSG00000065513 Mir26a-1 Mirn26a|Mirn26a-1|miR-26a|mir-26a-1 microRNA 26a-1 ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-24 chr2 146533420 146533625 + 2.40823996531185 NA Intergenic Intergenic -9409 NR_040502 74065 Mm.399508 NR_040502 ENSMUSG00000085796 4933406D12Rik - RIKEN cDNA 4933406D12 gene ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-45 chr9 119207708 119207905 + 2.40823996531185 NA intron (NM_133980, intron 1 of 9) intron (NM_133980, intron 1 of 9) 1299 NM_133980 102570 Mm.38775 NM_133980 ENSMUSG00000074028 Slc22a13 AI648912|OCTL1|OCTL3|ORCTL3 solute carrier family 22 (organic cation transporter), member 13 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-26 chr4 47226801 47227007 + 2.40823996531185 NA intron (NM_009928, intron 2 of 39) intron (NM_009928, intron 2 of 39) 18892 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-6 chr10 115249555 115249760 + 2.40823996531185 NA intron (NM_025706, intron 1 of 16) intron (NM_025706, intron 1 of 16) 1836 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-13 chr14 63996397 63996628 + 2.40823996531185 NA intron (NM_146246, intron 1 of 3) intron (NM_146246, intron 1 of 3) 4081 NM_146246 271209 Mm.300655 NM_146246 ENSMUSG00000046049 Rp1l1 BC031365|BE983540|Dcdc4|Rp1hl1 retinitis pigmentosa 1 homolog like 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-33 chr5 101870668 101870900 + 2.40823996531185 NA intron (NM_172882, intron 46 of 66) intron (NM_172882, intron 46 of 66) 105654 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-40 chr9 58443711 58443908 + 2.40823996531185 NA Intergenic Intergenic -11364 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-16 chr15 30275813 30276017 + 2.40823996531185 NA intron (NM_001355502, intron 1 of 21) intron (NM_001355502, intron 1 of 21) 103322 NM_008729 18163 Mm.321648 NM_008729 ENSMUSG00000022240 Ctnnd2 Catnd2|Nprap|neurojugin catenin (cadherin associated protein), delta 2 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-18 chr17 14394425 14394648 + 2.40823996531185 NA intron (NR_027986, intron 1 of 2) intron (NR_027986, intron 1 of 2) 4406 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-29 chr3 149821575 149821871 + 2.40823996531185 NA Intergenic B3|SINE|B2 546986 NR_040591 381482 Mm.393866 NR_040591 Gm1653 - predicted gene 1653 ncRNA unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-11 chr13 9159405 9159651 + 2.40823996531185 NA intron (NM_172585, intron 13 of 17) intron (NM_172585, intron 13 of 17) 65647 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-24 chr3 87965876 87966095 + 2.40823996531185 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -5108 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-17 chr15 53239845 53240044 + 2.40823996531185 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 106239 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-5 chr10 86185270 86185549 + 2.40823996531185 NA intron (NM_013722, intron 6 of 13) B4|SINE|B4 89555 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-12 chr13 36518187 36518411 + 2.40823996531185 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 216178 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-29 chr8 43652380 43652600 + 2.40823996531185 NA exon (NM_145745, exon 2 of 2) exon (NM_145745, exon 2 of 2) 13070 NM_145745 252866 Mm.383288 NM_145745 ENSMUSG00000079058 Adam34 - a disintegrin and metallopeptidase domain 34 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-28 chr3 86922615 86922861 + 2.40823996531185 NA Intergenic Intergenic -1854 NM_001195498 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-5 chr1 194677830 194678017 + 2.40823996531185 NA intron (NM_008882, intron 3 of 31) intron (NM_008882, intron 3 of 31) 58094 NM_008882 18845 Mm.2251 NM_008882 ENSMUSG00000026640 Plxna2 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 plexin A2 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-21 chr2 70863391 70863586 + 2.40823996531185 NA Intergenic Intergenic -38008 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-36 chr7 81303013 81303203 + 2.40823996531185 NA intron (NM_008803, intron 8 of 21) intron (NM_008803, intron 8 of 21) 42126 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-9 chr11 99874054 99874248 + 2.40823996531185 NA TTS (NM_015741) TTS (NM_015741) 762 NM_015741 16705 Mm.422800 NM_015741 ENSMUSG00000070335 Krtap9-1 - keratin associated protein 9-1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-28 chr6 116773206 116773409 + 2.40823996531185 NA Intergenic Intergenic -56549 NM_178768 319776 Mm.133120 NM_178768 ENSMUSG00000048108 Tmem72 C230095G01Rik transmembrane protein 72 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-23 chr3 52415234 52415480 + 2.40823996531185 NA Intergenic MLT2B1|LTR|ERVL -101607 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185 chr1 82853086 82853297 + 2.40823996531185 NA intron (NM_001310713, intron 1 of 11) RSINE1|SINE|B4 13731 NM_001347077 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-35 chr7 80029330 80029526 + 2.40823996531185 NA intron (NM_175433, intron 1 of 4) intron (NM_175433, intron 1 of 4) 3200 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-42 chr9 77793588 77793777 + 2.40823996531185 NA non-coding (NR_151778, exon 17 of 17) non-coding (NR_151778, exon 17 of 17) 39147 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-31 chr5 3442740 3442934 + 2.40823996531185 NA intron (NM_009873, intron 4 of 7) intron (NM_009873, intron 4 of 7) 98944 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-18 chr16 11909669 11909872 + 2.40823996531185 NA promoter-TSS (NM_146067) promoter-TSS (NM_146067) -347 NM_146067 223978 Mm.86360 NM_146067 ENSMUSG00000065979 Cpped1 C530044N13Rik calcineurin-like phosphoesterase domain containing 1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-4 chr10 59938271 59938522 + 2.40823996531185 NA Intergenic Intergenic 13374 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-43 chr9 100444631 100444824 + 2.40823996531185 NA Intergenic Intergenic 41746 NM_001033543 213208 Mm.242896 NM_001033543 ENSMUSG00000044244 Il20rb AV228068|Fndc6|Gm186|Il20R2 interleukin 20 receptor beta protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-27 chr5 137614422 137614696 + 2.40823996531185 NA intron (NM_027708, intron 8 of 9) (CAAA)n|Simple_repeat|Simple_repeat -3155 NM_008788 18542 Mm.262345 NM_008788 ENSMUSG00000029718 Pcolce Astt-2|Astt2|P14|PCPE-1 procollagen C-endopeptidase enhancer protein protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-31 chrX 141364845 141365096 + 2.40823996531185 NA intron (NM_053185, intron 2 of 44) L1Md_T|LINE|L1 109106 NM_053185 94216 Mm.155586 NM_053185 ENSMUSG00000031273 Col4a6 BB116301 collagen, type IV, alpha 6 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-10 chr12 29182333 29182540 + 2.40823996531185 NA intron (NR_154987, intron 3 of 3) intron (NR_154987, intron 3 of 3) 40507 NR_154987 102633526 Mm.134217 NR_154987 Gm31333 - predicted gene, 31333 ncRNA unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-30 chr8 107251290 107251482 + 2.40823996531185 NA Intergenic Intergenic -4778 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-22 chr2 113537961 113538156 + 2.40823996531185 NA intron (NM_001285459, intron 5 of 16) intron (NM_001285459, intron 5 of 16) 96994 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-23 chr2 127230498 127230689 + 2.40823996531185 NA exon (NM_177214, exon 29 of 45) exon (NM_177214, exon 29 of 45) 17223 NM_025296 26371 Mm.45179 NM_025296 ENSMUSG00000003662 Ciao1 AW210570|Wdr39 cytosolic iron-sulfur protein assembly 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-38 chr9 43210458 43210692 + 2.40823996531185 NA Intergenic Intergenic -4820 NM_011139 18988 Mm.436650 NM_011139 ENSMUSG00000032015 Pou2f3 Epoc-1|Oct-11a|Oct11|Otf-11|Otf11|Skin|Skin-1a|Skn-1a|Skn-li POU domain, class 2, transcription factor 3 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-10 chr11 60201842 60202072 + 2.40823996531185 NA TTS (NR_105887) TTS (NR_105887) 370 NR_105887 102465556 NR_105887 ENSMUSG00000099259 Mir6922 Gm27269|mmu-mir-6922 microRNA 6922 ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-19 chr18 33572175 33572384 + 2.40823996531185 NA Intergenic Intergenic 108116 NR_045415 433171 Mm.353332 NR_045415 Gm10549 - predicted gene 10549 ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-26 chr3 31832337 31832546 + 2.40823996531185 NA Intergenic Intergenic -70262 NM_028231 72413 Mm.64790 NM_028231 ENSMUSG00000037610 Kcnmb2 2700049B16Rik|3110031N04Rik potassium large conductance calcium-activated channel, subfamily M, beta member 2 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-7 chr10 24228091 24228297 + 2.40823996531185 NA intron (NM_021509, intron 1 of 11) intron (NM_021509, intron 1 of 11) 4677 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-9 chr11 22517102 22517299 + 2.40823996531185 NA exon (NM_153596, exon 2 of 4) exon (NM_153596, exon 2 of 4) 4917 NM_153596 103765 Mm.221274 NM_153596 ENSMUSG00000049904 Tmem17 AI503894|AW049890 transmembrane protein 17 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-32 chrX 169884592 169884815 + 2.40823996531185 NA intron (NM_001290505, intron 1 of 9) intron (NM_001290505, intron 1 of 9) 5084 NM_001290505 17318 Mm.34441 NM_010797 ENSMUSG00000035299 Mid1 61B3-R|DXHXS1141|Fxy|Trim18 midline 1 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-16 chr14 45490568 45490758 + 2.40823996531185 NA intron (NM_146054, intron 3 of 14) B1_Mur1|SINE|Alu 39402 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-2 chr1 182417713 182417924 + 2.40823996531185 NA intron (NM_173378, intron 1 of 17) intron (NM_173378, intron 1 of 17) 8651 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-21 chr18 34579322 34579526 + 2.40823996531185 NA promoter-TSS (NM_080637) promoter-TSS (NM_080637) -309 NR_151690 75533 Mm.275430 NM_080637 ENSMUSG00000035984 Nme5 1700019D05Rik|Nm23-M5 NME/NM23 family member 5 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-2 chr1 17097784 17098036 + 2.40823996531185 NA promoter-TSS (NM_020604) promoter-TSS (NM_020604) -21 NM_020604 57339 Mm.143761 NM_020604 ENSMUSG00000042686 Jph1 JP-1|Jp1 junctophilin 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-30 chr4 44839742 44839945 + 2.40823996531185 NA intron (NM_138590, intron 2 of 8) intron (NM_138590, intron 2 of 8) 83284 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-27 chr3 52142760 52142953 + 2.40823996531185 NA Intergenic Intergenic -37850 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-20 chr17 75082665 75082854 + 2.40823996531185 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) 77230 NM_019919 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-20 chr19 57565450 57565638 + 2.40823996531185 NA Intergenic Intergenic -45490 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-41 chr9 63840761 63840948 + 2.40823996531185 NA Intergenic Intergenic -82860 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-6 chr10 16587245 16587441 + 2.40823996531185 NA Intergenic Intergenic 508439 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-37 chr7 139382544 139382798 + 2.40823996531185 NA Intergenic RMER15|LTR|ERVL -6438 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak1_7_0_2.73709502379104_1.36854751189552_2.40823996531185-25 chr3 135635291 135635480 + 2.40823996531185 NA intron (NM_008689, intron 6 of 24) intron (NM_008689, intron 6 of 24) 56162 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-12 chr14 55727229 55727480 + 2.40823996531185 NA Intergenic Intergenic -5091 NM_001360387 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-32 chr5 98578379 98578595 + 2.40823996531185 NA intron (NM_001024614, intron 3 of 5) intron (NM_001024614, intron 3 of 5) -102823 NR_030484 735265 NR_030484 ENSMUSG00000105814 Mir703 Mirn703|mir-703|mmu-mir-703 microRNA 703 ncRNA unique_peak1_8_0_2.90582120781919_1.4529106039096_2.40823996531185-15 chr14 73326972 73327195 + 2.40823996531185 NA Intergenic Intergenic -1261 NM_009029 19645 Mm.273862 NM_009029 ENSMUSG00000022105 Rb1 Rb|Rb-1|pRb|pp105 RB transcriptional corepressor 1 protein-coding common_peak1_241_140_0.481704429004287_7.38040356690094_2.40463348957171 chr1 20996986 20999555 + 2.40463348957171 NA Intergenic Intergenic 46644 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_62_25_0.992930580105742_5.19690500819396_2.40122790931992 chr7 27232783 27233682 + 2.40122790931992 NA intron (NM_133770, intron 1 of 14) intron (NM_133770, intron 1 of 14) 219 NM_133770 76889 Mm.124728 NM_133770 ENSMUSG00000003762 Coq8b 0610012P18Rik|Adck4 coenzyme Q8B protein-coding common_peak2_62_25_0.992930580105742_5.19690500819396_2.40122790931992 chr14 34089168 34089867 + 2.40122790931992 NA exon (NM_001281845, exon 2 of 12) exon (NM_001281845, exon 2 of 12) 3538 NM_013473 11752 Mm.3267 NM_013473 ENSMUSG00000021950 Anxa8 AI466995|Anx8 annexin A8 protein-coding unique_peak1_62_25_0.992930580105742_5.19690500819396_2.40122790931992-2 chr8 61496980 61497908 + 2.40122790931992 NA intron (NM_145595, intron 4 of 4) intron (NM_145595, intron 4 of 4) 9710 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak2_29_52_-1.09738790936407_5.17922649988116_2.40122790931992 chr3 142372538 142373524 + 2.40122790931992 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 18819 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak2_29_52_-1.09738790936407_5.17922649988116_2.40122790931992-2 chr8 79207876 79208322 + 2.40122790931992 NA Intergenic Intergenic 40484 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding common_peak1_62_25_0.992930580105742_5.19690500819396_2.40122790931992-2 chr8 126842358 126842982 + 2.40122790931992 NA Intergenic Intergenic -6350 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_62_25_0.992930580105742_5.19690500819396_2.40122790931992 chr7 98171005 98171899 + 2.40122790931992 NA intron (NM_007602, intron 1 of 12) intron (NM_007602, intron 1 of 12) -5742 NR_045972 330599 Mm.406608 NR_045969 Gm16938 - predicted gene, 16938 ncRNA common_peak2_41_66_-0.953554494438392_5.58931194323858_2.40088210370214 chr2 165866600 165867287 + 2.40088210370214 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) -8770 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_79_35_0.865661982382874_5.60275599263375_2.40088210370214 chr19 56997069 56998200 + 2.40088210370214 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 10941 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_175_96_0.565152601263445_6.88248914281885_2.39976817774852 chr11 76586190 76587377 + 2.39976817774852 NA Intergenic RSINE1|SINE|B4 -9044 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_117_144_-0.587562984265499_6.88612759788218_2.39976817774852 chr6 146577527 146578551 + 2.39976817774852 NA promoter-TSS (NM_138757) promoter-TSS (NM_138757) 128 NM_026218 67529 Mm.333499 NM_026218 ENSMUSG00000040242 Fgfr1op2 1500031J01Rik FGFR1 oncogene partner 2 protein-coding common_peak1_176_96_0.573268865789761_6.88654727508201_2.39976817774852 chr10 4387186 4388422 + 2.39976817774852 NA promoter-TSS (NM_001359811) promoter-TSS (NM_001359811) 304 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak2_116_144_-0.599754690678156_6.88003174467586_2.39976817774852 chr15 66868037 66869043 + 2.39976817774852 NA Intergenic Intergenic -22853 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-3 chr14 79519139 79519539 + 2.39922209159552 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 3665 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding unique_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552 chr10 80167796 80168183 + 2.39922209159552 NA intron (NR_152857, intron 1 of 7) CpG 150 NR_152857 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak2_11_29_-1.58895996959002_4.11241061081351_2.39922209159552 chr7 25378319 25378742 + 2.39922209159552 NA TTS (NM_010719) TTS (NM_010719) 1711 NR_073027 654804 Mm.389841 NM_001039540 ENSMUSG00000053714 4732471J01Rik - RIKEN cDNA 4732471J01 gene ncRNA common_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-4 chr3 152511872 152512488 + 2.39922209159552 NA intron (NM_001081277, intron 8 of 13) intron (NM_001081277, intron 8 of 13) 115496 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-3 chr2 15054753 15055028 + 2.39922209159552 NA promoter-TSS (NM_029466) promoter-TSS (NM_029466) -18 NM_001165943 74455 Mm.478923 NM_028950 ENSMUSG00000026707 Nsun6 4933403D21Rik|4933414E04Rik|NOPD1 NOL1/NOP2/Sun domain family member 6 protein-coding unique_peak2_11_29_-1.58895996959002_4.11241061081351_2.39922209159552-2 chr9 116384562 116385029 + 2.39922209159552 NA Intergenic Intergenic 195615 NR_152204 100043817 Mm.404276 NR_152204 Gm4668 - predicted gene 4668 ncRNA unique_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-5 chr3 95624968 95625250 + 2.39922209159552 NA 5' UTR (NM_019561, exon 1 of 4) 5' UTR (NM_019561, exon 1 of 4) 129 NM_001026212 56205 Mm.241365 NM_019561 ENSMUSG00000038619 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha protein-coding unique_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-4 chr17 86960881 86961225 + 2.39922209159552 NA Intergenic Intergenic -2058 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552 chr10 75899568 75900029 + 2.39922209159552 NA intron (NM_011418, intron 7 of 8) intron (NM_011418, intron 7 of 8) 6400 NM_001358985 70377 Mm.275878 NM_024440 ENSMUSG00000009092 Derl3 1810006I20Rik|1810063P04Rik|IZP6|derlin-3 Der1-like domain family, member 3 protein-coding unique_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-2 chr12 105031098 105031689 + 2.39922209159552 NA promoter-TSS (NR_028576) promoter-TSS (NR_028576) -44 NR_028576 100306943 NR_028576 ENSMUSG00000088789 Scarna13 U93 small Cajal body-specific RNA 1 ncRNA common_peak1_34_10_1.39192437390851_4.15539380559155_2.39922209159552-2 chr11 8465640 8465988 + 2.39922209159552 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 198721 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_90_118_-0.674675518851945_6.55748000388197_2.39893013681232 chr6 88960352 88961036 + 2.39893013681232 NA Intergenic Intergenic 58443 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_90_118_-0.674675518851945_6.55748000388197_2.39893013681232 chr16 24494234 24495555 + 2.39893013681232 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -34420 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_91_118_-0.659019441084933_6.56530804276548_2.39893013681232 chr8 126735640 126737026 + 2.39893013681232 NA Intergenic Intergenic -112687 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_143_75_0.629673776082631_6.5627644014849_2.39893013681232 chr2 151905749 151907209 + 2.39893013681232 NA Intergenic Intergenic -4728 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_134_161_-0.55470123280383_7.06249938648271_2.39764240217155 chr1 151344676 151346098 + 2.39764240217155 NA intron (NM_001039511, intron 1 of 7) CpG 889 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_207_231_-0.453607759392191_7.63117711543148_2.39625216486778 chr19 18814536 18817189 + 2.39625216486778 NA intron (NM_153417, intron 17 of 38) intron (NM_153417, intron 17 of 38) 65879 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_104_50_0.752711273228519_6.04878097858576_2.39518489136359 chr1 106758681 106759732 + 2.39518489136359 NA intron (NM_027534, intron 1 of 9) intron (NM_027534, intron 1 of 9) 536 NM_027534 70750 Mm.458911 NM_027534 ENSMUSG00000009905 Kdsr 6330410P18Rik|9430079B08Rik|Fvt1 3-ketodihydrosphingosine reductase protein-coding common_peak1_104_50_0.752711273228519_6.04878097858576_2.39518489136359-2 chr6 92214291 92214938 + 2.39518489136359 NA intron (NM_030081, intron 1 of 11) CpG 197 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding common_peak1_140_167_-0.544875496822495_7.11987967436751_2.39514254915863 chr11 86569661 86571873 + 2.39514254915863 NA Intergenic Intergenic 13391 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-10 chr4 28813649 28813913 + 2.39372960542229 NA intron (NM_010141, intron 1 of 16) CpG 636 NM_001122889 13841 Mm.257266 NM_010141 ENSMUSG00000028289 Epha7 Cek11|Ebk|Ehk3|Hek11|Mdk1 Eph receptor A7 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-21 chr5 125043007 125043352 + 2.39372960542229 NA intron (NM_011424, intron 21 of 46) intron (NM_011424, intron 21 of 46) 39704 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-15 chr3 102690820 102691095 + 2.39372960542229 NA Intergenic Intergenic -43813 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-10 chr15 53691159 53691481 + 2.39372960542229 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -77041 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-4 chr16 58407817 58408126 + 2.39372960542229 NA promoter-TSS (NM_028523) promoter-TSS (NM_028523) -564 NM_001356484 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229 chr11 20531606 20531847 + 2.39372960542229 NA Intergenic Intergenic -11527 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-2 chr1 127240396 127240781 + 2.39372960542229 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 35602 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-24 chr9 120868336 120868753 + 2.39372960542229 NA Intergenic Intergenic 46706 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-7 chr18 56900488 56900812 + 2.39372960542229 NA intron (NM_177115, intron 1 of 4) L2c|LINE|L2 24898 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-5 chr13 15984678 15985007 + 2.39372960542229 NA intron (NR_155430, intron 1 of 3) intron (NR_155430, intron 1 of 3) -27009 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-22 chr8 78655900 78656124 + 2.39372960542229 NA intron (NM_001009981, intron 5 of 10) intron (NM_001009981, intron 5 of 10) 146684 NM_001282108 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-4 chr11 67897814 67898375 + 2.39372960542229 NA intron (NM_173754, intron 4 of 14) intron (NM_173754, intron 4 of 14) 24059 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-6 chr17 26505248 26505542 + 2.39372960542229 NA TTS (NM_013642) TTS (NM_013642) 3077 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-2 chr11 98448739 98449188 + 2.39372960542229 NA intron (NM_010346, intron 1 of 14) intron (NM_010346, intron 1 of 14) 2129 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-7 chr13 107887200 107887452 + 2.39372960542229 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 2738 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-23 chr9 83556841 83557370 + 2.39372960542229 NA intron (NM_172507, intron 1 of 3) intron (NM_172507, intron 1 of 3) 8767 NM_172507 212531 Mm.491246 NM_172507 ENSMUSG00000032261 Sh3bgrl2 A930014C21Rik|AA408038|B930089I21 SH3 domain binding glutamic acid-rich protein like 2 protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-9 chr3 66041687 66042033 + 2.39372960542229 NA Intergenic Intergenic -83611 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-19 chr5 91989085 91989301 + 2.39372960542229 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 1720 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-8 chr2 26933717 26934175 + 2.39372960542229 NA promoter-TSS (NM_011512) promoter-TSS (NM_011512) -123 NM_198628 279029 Mm.330079 NM_198628 ENSMUSG00000049897 Stkld1 Gm711|Sgk071 serine/threonine kinase-like domain containing 1 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-14 chr2 26313936 26314357 + 2.39372960542229 NA promoter-TSS (NM_001355574) promoter-TSS (NM_001355574) -465 NM_001355576 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding common_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229 chr14 32517861 32518284 + 2.39372960542229 NA intron (NM_001081221, intron 2 of 20) intron (NM_001081221, intron 2 of 20) 4551 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-8 chr14 20143651 20143980 + 2.39372960542229 NA intron (NM_021542, intron 4 of 4) intron (NM_021542, intron 4 of 4) 37967 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-6 chr13 74768348 74768777 + 2.39372960542229 NA intron (NM_001301153, intron 3 of 31) intron (NM_001301153, intron 3 of 31) 2174 NM_001301156 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-9 chr14 21545848 21546327 + 2.39372960542229 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 46302 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-11 chr4 63237921 63238277 + 2.39372960542229 NA intron (NM_025685, intron 5 of 60) intron (NM_025685, intron 5 of 60) -18752 NR_030477 735262 NR_030477 ENSMUSG00000070102 Mir455 Mirn455|mir-455|mmu-mir-455 microRNA 455 ncRNA unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-13 chr19 55539726 55539951 + 2.39372960542229 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 162366 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-18 chr5 36716694 36717195 + 2.39372960542229 NA Intergenic Intergenic -20923 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-3 chr12 33178464 33178993 + 2.39372960542229 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 31042 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-12 chr18 64938653 64938888 + 2.39372960542229 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) 51014 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak2_5_20_-2.06733181718702_3.35865151418525_2.39372960542229-5 chr17 6118067 6118436 + 2.39372960542229 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 11421 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-17 chr5 31643416 31644175 + 2.39372960542229 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 23545 NR_105859 102466677 NR_105859 ENSMUSG00000099301 Mir3473e Gm27422|mmu-mir-3473e microRNA 3473e ncRNA common_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-2 chr9 123237302 123237650 + 2.39372960542229 NA Intergenic Intergenic -21438 NM_133974 109332 Mm.27519 NM_133974 ENSMUSG00000035498 Cdcp1 9030022E12Rik|AA409659|E030027H19Rik CUB domain containing protein 1 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-11 chr15 80814809 80815052 + 2.39372960542229 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 16320 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-3 chr1 155241666 155242178 + 2.39372960542229 NA Intergenic Intergenic 83219 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-16 chr3 121625899 121626179 + 2.39372960542229 NA Intergenic Intergenic 17446 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229-20 chr5 113101810 113102272 + 2.39372960542229 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) -20457 NM_001359009 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding unique_peak1_23_5_1.72591314572409_3.4479190735832_2.39372960542229 chr1 125238112 125238397 + 2.39372960542229 NA Intergenic Intergenic 197473 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-23 chr3 19663476 19663757 + 2.39353597935438 NA intron (NM_001081281, intron 4 of 9) intron (NM_001081281, intron 4 of 9) 19156 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-13 chr14 69609660 69610013 + 2.39353597935438 NA intron (NM_033325, intron 1 of 13) intron (NM_033325, intron 1 of 13) 360 NM_033325 94352 Mm.116714 NM_033325 ENSMUSG00000034205 Loxl2 1110004B06Rik|4930526G11Rik|9430067E15Rik lysyl oxidase-like 2 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-32 chr9 65827944 65828285 + 2.39353597935438 NA promoter-TSS (NM_172536) promoter-TSS (NM_172536) -550 NM_172536 214812 Mm.139231 NM_172536 ENSMUSG00000040524 Zfp609 9830165N24|BC016271|Znf609|mKIAA0295 zinc finger protein 609 protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-4 chr2 180173001 180173307 + 2.39353597935438 NA intron (NM_019822, intron 3 of 9) intron (NM_019822, intron 3 of 9) 1566 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438 chr1 58359917 58360119 + 2.39353597935438 NA intron (NM_001008419, intron 34 of 35) intron (NM_001008419, intron 34 of 35) -33118 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-16 chr17 4940654 4941004 + 2.39353597935438 NA Intergenic Intergenic -54245 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-3 chr13 48105347 48105673 + 2.39353597935438 NA intron (NR_102303, intron 1 of 2) intron (NR_102303, intron 1 of 2) -86902 NR_038004 70971 Mm.158514 NR_038004 ENSMUSG00000047324 4931429P17Rik - RIKEN cDNA 4931429P17 gene ncRNA unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-29 chr7 66311590 66311885 + 2.39353597935438 NA intron (NM_146191, intron 6 of 33) B4|SINE|B4 69987 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-19 chr17 43551394 43551669 + 2.39353597935438 NA Intergenic Intergenic -7892 NM_001254953 100043332 Mm.17626 NM_001254953 ENSMUSG00000096140 Ankrd66 AU041848|D730048J04Rik|Gm4368 ankyrin repeat domain 66 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-2 chr1 133133243 133133633 + 2.39353597935438 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 2272 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-31 chr8 33840128 33840373 + 2.39353597935438 NA intron (NM_001042675, intron 4 of 6) intron (NM_001042675, intron 4 of 6) 89613 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-28 chr7 4776578 4776921 + 2.39353597935438 NA intron (NM_001290423, intron 1 of 4) intron (NM_001290423, intron 1 of 4) 1392 NM_008350 16156 Mm.35814 NM_008350 ENSMUSG00000004371 Il11 IL-11 interleukin 11 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-18 chr17 34264646 34264840 + 2.39353597935438 NA intron (NM_207105, intron 1 of 5) CpG 1516 NM_207105 14961 Mm.254067 NM_207105 ENSMUSG00000073421 H2-Ab1 AI845868|Abeta|H-2Ab|H2-Ab|I-Abeta|IAb|Ia-2|Ia2|Rmcs1 histocompatibility 2, class II antigen A, beta 1 protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-6 chr3 80058425 80058845 + 2.39353597935438 NA Intergenic Intergenic 172705 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-25 chr5 124957727 124958030 + 2.39353597935438 NA Intergenic Intergenic -45597 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-14 chr15 11526954 11527302 + 2.39353597935438 NA Intergenic Intergenic -127470 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-5 chr3 51908293 51908594 + 2.39353597935438 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 196563 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-10 chr12 102394016 102394358 + 2.39353597935438 NA 3' UTR (NM_011175, exon 14 of 14) 3' UTR (NM_011175, exon 14 of 14) 45626 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-5 chr10 61568917 61569225 + 2.39353597935438 NA intron (NM_153542, intron 4 of 4) intron (NM_153542, intron 4 of 4) -26413 NM_001177511 237362 Mm.131297 NM_001177511 ENSMUSG00000020090 Npffr1 Gm236|Gpr147|NPFF1|NPFF1R|OT7T022 neuropeptide FF receptor 1 protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-8 chr9 105377093 105377353 + 2.39353597935438 NA intron (NM_172461, intron 2 of 15) intron (NM_172461, intron 2 of 15) 18064 NM_172461 208583 Mm.347509 NM_172461 ENSMUSG00000035032 Nek11 4932416N14Rik NIMA (never in mitosis gene a)-related expressed kinase 11 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-22 chr2 122718464 122718762 + 2.39353597935438 NA Intergenic Intergenic -15950 NM_001290993 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-6 chr10 67745405 67745817 + 2.39353597935438 NA Intergenic Intergenic 167051 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-12 chr14 31665757 31666038 + 2.39353597935438 NA exon (NM_025295, exon 3 of 4) exon (NM_025295, exon 3 of 4) 24840 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-7 chr10 111511410 111511658 + 2.39353597935438 NA Intergenic Intergenic 5248 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-7 chr7 27553013 27553377 + 2.39353597935438 NA promoter-TSS (NM_011116) promoter-TSS (NM_011116) 23 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438 chr11 83815236 83815752 + 2.39353597935438 NA Intergenic Intergenic -35375 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-30 chr8 25306709 25306989 + 2.39353597935438 NA promoter-TSS (NR_040352) promoter-TSS (NR_040352) -579 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-26 chr5 137601750 137602108 + 2.39353597935438 NA promoter-TSS (NM_030037) promoter-TSS (NM_030037) -870 NM_030037 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-15 chr15 84380049 84380300 + 2.39353597935438 NA 3' UTR (NM_001347543, exon 6 of 6) 3' UTR (NM_001347543, exon 6 of 6) 54055 NM_001162500 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-21 chr19 58396153 58396370 + 2.39353597935438 NA intron (NM_010279, intron 4 of 10) intron (NM_010279, intron 4 of 10) 59137 NM_001285457 14585 Mm.88367 NM_010279 ENSMUSG00000025089 Gfra1 AU042498 glial cell line derived neurotrophic factor family receptor alpha 1 protein-coding unique_peak2_4_18_-2.18412061132542_3.15586720778087_2.39353597935438-2 chr13 29834700 29835004 + 2.39353597935438 NA intron (NM_001308486, intron 4 of 5) intron (NM_001308486, intron 4 of 5) 20821 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-3 chr1 138623730 138624221 + 2.39353597935438 NA Intergenic Intergenic -4218 NM_001311148 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-11 chr14 31664447 31664769 + 2.39353597935438 NA intron (NM_025295, intron 2 of 3) PB1D7|SINE|Alu 23551 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-8 chr11 4215640 4216316 + 2.39353597935438 NA TTS (NM_134023) TTS (NM_134023) -2273 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik|Castor1 GATS protein-like 3 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-20 chr19 4429134 4429399 + 2.39353597935438 NA intron (NM_001329989, intron 3 of 4) intron (NM_001329989, intron 3 of 4) -10057 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-9 chr11 118211398 118211655 + 2.39353597935438 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 1216 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-27 chr6 114456851 114457131 + 2.39353597935438 NA intron (NM_001252643, intron 2 of 2) intron (NM_001252643, intron 2 of 2) -1531 NM_001317124 15465 Mm.333327 NM_008285 ENSMUSG00000053004 Hrh1 Bphs|H1R|HH1R|Hir histamine receptor H1 protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-17 chr17 26663243 26663703 + 2.39353597935438 NA Intergenic Intergenic -12923 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-4 chr10 28001276 28001693 + 2.39353597935438 NA Intergenic Intergenic -73336 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak1_21_4_1.86430228728294_3.25407923852883_2.39353597935438-24 chr5 104426606 104426919 + 2.39353597935438 NA Intergenic Intergenic -8349 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_170_92_0.584620868318782_6.83146924526742_2.39212899006867 chr2 34870091 34871575 + 2.39212899006867 NA exon (NM_080554, exon 1 of 10) exon (NM_080554, exon 1 of 10) 129 NM_001355544 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_123_150_-0.575010179345541_6.95089964965231_2.39160242598171 chr8 13784990 13786605 + 2.39160242598171 NA exon (NM_025924, exon 1 of 9) exon (NM_025924, exon 1 of 9) 182 NM_025924 67031 Mm.44858 NM_025924 ENSMUSG00000038398 Upf3a 2600001C03Rik|4930546M19Rik|RENT3A|UPF3 UPF3 regulator of nonsense transcripts homolog A (yeast) protein-coding unique_peak1_84_38_0.837030557654837_5.70391749768967_2.39114340722014 chr8 61341293 61342063 + 2.39114340722014 NA intron (NM_021506, intron 4 of 11) intron (NM_021506, intron 4 of 11) -52806 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_84_38_0.837030557654837_5.70391749768967_2.39114340722014 chr19 56992968 56993737 + 2.39114340722014 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 15223 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_71_30_0.930459958712586_5.41942628974317_2.39089534683746-2 chr4 132261651 132262316 + 2.39089534683746 NA promoter-TSS (NM_020273) promoter-TSS (NM_020273) -434 NM_001122992 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding unique_peak1_71_30_0.930459958712586_5.41942628974317_2.39089534683746 chr11 74925419 74926330 + 2.39089534683746 NA promoter-TSS (NM_013761) promoter-TSS (NM_013761) 2 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_56_82_-0.825040374574323_5.96251924405976_2.38916202615792 chr1 180851113 180851690 + 2.38916202615792 NA intron (NM_145943, intron 1 of 6) intron (NM_145943, intron 1 of 6) 250 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak1_99_47_0.770281381857908_5.97010319165011_2.38916202615792 chr4 150060445 150061556 + 2.38916202615792 NA Intergenic Intergenic -7454 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak1_99_47_0.770281381857908_5.97010319165011_2.38916202615792-2 chr7 109579382 109579942 + 2.38916202615792 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 36906 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_56_82_-0.825040374574323_5.96251924405976_2.38916202615792 chr2 84528736 84529817 + 2.38916202615792 NA Intergenic Intergenic -22403 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_56_82_-0.825040374574323_5.96251924405976_2.38916202615792-2 chr8 25274584 25274978 + 2.38916202615792 NA Intergenic Intergenic 31489 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_77_104_-0.714926720556798_6.35678215738772_2.38909555930979 chr7 141327020 141328061 + 2.38909555930979 NA promoter-TSS (NR_024509) promoter-TSS (NR_024509) 185 NM_016874 54006 Mm.28392 NM_016874 ENSMUSG00000058886 Deaf1 AU042387|C230009B13Rik|NUDR DEAF1, transcription factor protein-coding common_peak1_126_64_0.675271808545461_6.36000371730118_2.38909555930977 chr7 78782766 78783765 + 2.38909555930977 NA promoter-TSS (NM_023331) promoter-TSS (NM_023331) 134 NM_001360702 67994 Mm.297033 NM_026498 ENSMUSG00000030611 Mrps11 0710005I03Rik|C79873|MRP-S11|S11mt mitochondrial ribosomal protein S11 protein-coding unique_peak1_44_15_1.21136814742658_4.60568407371329_2.38724857749548-2 chr3 27639376 27639641 + 2.38724857749548 NA intron (NM_001356953, intron 3 of 26) intron (NM_001356953, intron 3 of 26) -54513 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak1_44_15_1.21136814742658_4.60568407371329_2.38724857749548 chr4 152362593 152363023 + 2.38724857749548 NA intron (NM_001081376, intron 9 of 41) intron (NM_001081376, intron 9 of 41) 24157 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding unique_peak1_44_15_1.21136814742658_4.60568407371329_2.38724857749548 chr15 79130809 79131560 + 2.38724857749548 NA intron (NM_177461, intron 13 of 15) B1_Mur4|SINE|Alu 10067 NM_001310581 27660 Mm.390827 NM_138581 ENSMUSG00000033029 1700088E04Rik ESTJ0827E04 RIKEN cDNA 1700088E04 gene protein-coding unique_peak1_44_15_1.21136814742658_4.60568407371329_2.38724857749548-3 chr9 69289805 69290551 + 2.38724857749548 NA intron (NM_001289916, intron 1 of 9) CpG 337 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak2_17_37_-1.34916128519764_4.57334687084477_2.38724857749547 chr11 113032790 113033279 + 2.38724857749547 NA Intergenic Intergenic 168804 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_59_23_1.03851506490473_5.10422003317352_2.3865980902211 chr14 70075178 70075810 + 2.3865980902211 NA Intergenic CpG -1951 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_59_23_1.03851506490473_5.10422003317352_2.3865980902211 chr14 64652605 64653584 + 2.3865980902211 NA intron (NM_001081177, intron 1 of 39) intron (NM_001081177, intron 1 of 39) 563 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_53_78_-0.831233897276944_5.88816379953863_2.38608689960013 chr10 80576078 80577255 + 2.38608689960013 NA intron (NM_078477, intron 1 of 1) intron (NM_078477, intron 1 of 1) 630 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak1_53_78_-0.831233897276944_5.88816379953863_2.38608689960013 chr8 124021165 124021780 + 2.38608689960013 NA promoter-TSS (NM_133966) promoter-TSS (NM_133966) -75 NM_133966 102162 Mm.291777 NM_133966 ENSMUSG00000038697 Taf5l 1110005N04Rik|AI849020 TATA-box binding protein associated factor 5 like protein-coding common_peak1_94_44_0.789912277396106_5.88680923502773_2.38608689960013 chr10 122886458 122887775 + 2.38608689960013 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 98608 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_115_57_0.70987704667645_6.2129195184658_2.38597324475625 chr17 28691509 28692534 + 2.38597324475625 NA promoter-TSS (NM_001357724) promoter-TSS (NM_001357724) -547 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak1_107_134_-0.611323725723916_6.77115373418887_2.38584683512514 chr15 73422224 73423156 + 2.38584683512514 NA intron (NM_001358046, intron 1 of 34) CpG 501 NM_007982 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_227_131_0.49149497826766_7.29014160849228_2.38369985355641 chr14 25459349 25460550 + 2.38369985355641 NA intron (NM_183208, intron 1 of 23) CpG 764 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_153_180_-0.52606641448526_7.23681267984058_2.38119176888682 chr12 51690347 51692260 + 2.38119176888682 NA 5' UTR (NM_021710, exon 1 of 6) 5' UTR (NM_021710, exon 1 of 6) 337 NM_001329698 11782 Mm.386749 NM_021710 ENSMUSG00000020955 Ap4s1 AI314282 adaptor-related protein complex AP-4, sigma 1 protein-coding common_peak2_141_168_-0.543313674148696_7.12922259920784_2.38022627114337 chr14 26668565 26670203 + 2.38022627114337 NA TTS (NR_106132) TTS (NR_106132) 224 NR_106132 102465773 NR_106132 ENSMUSG00000098751 Mir7672 Gm27314|mmu-mir-7672 microRNA 7672 ncRNA common_peak2_87_114_-0.673369627920559_6.5088052369841_2.37829436004118 chr11 69846609 69847754 + 2.37829436004118 NA intron (NM_001168497, intron 2 of 7) intron (NM_001168497, intron 2 of 7) 537 NR_033133 70310 Mm.28874 NM_023564 ENSMUSG00000019461 Plscr3 2210403O21Rik|2610037N06Rik|ESTM3|X83310 phospholipid scramblase 3 protein-coding common_peak1_247_269_-0.420476016644538_7.86657758872856_2.37765064455481 chr8 126592345 126593485 + 2.37765064455481 NA exon (NM_001164598, exon 1 of 2) exon (NM_001164598, exon 1 of 2) 521 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_145_76_0.630573915297782_6.58207349834379_2.37705135350056 chr8 31299345 31301193 + 2.37705135350056 NA Intergenic Intergenic -67480 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_24_46_-1.18523500995209_4.96197134670159_2.37649337096008 chr8 84846389 84846809 + 2.37649337096008 NA intron (NM_007591, intron 1 of 8) CpG 332 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding unique_peak1_55_21_1.06521249558138_4.99203786642799_2.37649337096008 chr3 89895635 89896687 + 2.37649337096008 NA intron (NM_010559, intron 1 of 9) intron (NM_010559, intron 1 of 9) 17035 NM_001310676 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding unique_peak2_20_40_-1.23796232902546_4.73857084010535_2.37490429172805-2 chr5 63968180 63968711 + 2.37490429172805 NA intron (NM_145923, intron 1 of 6) CpG 452 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding unique_peak2_20_40_-1.23796232902546_4.73857084010535_2.37490429172805 chr11 91072169 91073267 + 2.37490429172805 NA Intergenic Intergenic 268027 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA common_peak2_20_40_-1.23796232902546_4.73857084010535_2.37490429172805 chr9 107568871 107569173 + 2.37490429172805 NA promoter-TSS (NM_010489) promoter-TSS (NM_010489) -141 NM_010489 15587 Mm.4834 NM_010489 ENSMUSG00000010047 Hyal2 AI256841|AU020858|AW555733 hyaluronoglucosaminidase 2 protein-coding unique_peak2_20_40_-1.23796232902546_4.73857084010535_2.37490429172805-4 chr6 91533888 91534683 + 2.37490429172805 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 18250 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_20_40_-1.23796232902546_4.73857084010535_2.37490429172805-3 chr6 31097323 31098036 + 2.37490429172805 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -34586 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_19_40_-1.30785506164641_4.70362447379488_2.37490429172805 chr5 146884100 146884812 + 2.37490429172805 NA Intergenic Intergenic 39385 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding unique_peak1_48_17_1.16343314192374_4.75164157240418_2.37490429172804-3 chr8 87071566 87072338 + 2.37490429172804 NA Intergenic Intergenic 127898 NR_040697 100038706 Mm.334690 NR_040697 ENSMUSG00000099207 Gm10637 - predicted gene 10637 ncRNA unique_peak1_47_17_1.13389566542969_4.73687283415716_2.37490429172804-4 chr6 145744242 145745157 + 2.37490429172804 NA Intergenic Intergenic -63684 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_48_17_1.16343314192374_4.75164157240418_2.37490429172804-2 chr14 69690094 69690972 + 2.37490429172804 NA intron (NM_033325, intron 12 of 13) intron (NM_033325, intron 12 of 13) -1715 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA unique_peak1_48_17_1.16343314192374_4.75164157240418_2.37490429172804 chr1 73955434 73956248 + 2.37490429172804 NA intron (NM_001289895, intron 18 of 32) intron (NM_001289895, intron 18 of 32) -91375 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak1_48_17_1.16343314192374_4.75164157240418_2.37490429172804-2 chr5 5686722 5687112 + 2.37490429172804 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 7172 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak1_47_17_1.13389566542969_4.73687283415716_2.37490429172804-2 chr14 69688851 69689746 + 2.37490429172804 NA intron (NM_033325, intron 11 of 13) intron (NM_033325, intron 11 of 13) -2950 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA unique_peak1_47_17_1.13389566542969_4.73687283415716_2.37490429172804 chr11 77985073 77985898 + 2.37490429172804 NA intron (NM_174852, intron 2 of 14) intron (NM_174852, intron 2 of 14) 2669 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_48_17_1.16343314192374_4.75164157240418_2.37490429172804 chr11 4637722 4638063 + 2.37490429172804 NA promoter-TSS (NM_029291) promoter-TSS (NM_029291) 99 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding unique_peak1_47_17_1.13389566542969_4.73687283415716_2.37490429172804-3 chr19 3912280 3912666 + 2.37490429172804 NA 5' UTR (NM_144870, exon 1 of 7) 5' UTR (NM_144870, exon 1 of 7) 301 NM_144870 225887 Mm.44227 NM_144870 ENSMUSG00000059734 Ndufs8 BC021616|CI-23kD|TYKY NADH dehydrogenase (ubiquinone) Fe-S protein 8 protein-coding common_peak1_47_17_1.13389566542969_4.73687283415716_2.37490429172804 chr4 139579346 139579986 + 2.37490429172804 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 4946 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_48_17_1.16343314192374_4.75164157240418_2.37490429172804-3 chr6 85369655 85370468 + 2.37490429172804 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) 4573 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak1_51_19_1.09655509999451_4.87020564488462_2.37206698596504-3 chr2 27859005 27859538 + 2.37206698596504 NA Intergenic Intergenic -27154 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_51_19_1.09655509999451_4.87020564488462_2.37206698596504-4 chr6 30401909 30402432 + 2.37206698596504 NA intron (NM_001311087, intron 1 of 8) CpG 315 NM_001311087 76788 Mm.277308 NM_029742 ENSMUSG00000029775 Klhdc10 2410127E18Rik|AI593221|mKIAA0265 kelch domain containing 10 protein-coding common_peak1_51_19_1.09655509999451_4.87020564488462_2.37206698596504-2 chr14 67072075 67072461 + 2.37206698596504 NA 5' UTR (NM_001205188, exon 1 of 10) 5' UTR (NM_001205188, exon 1 of 10) 203 NM_001360034 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding common_peak1_51_19_1.09655509999451_4.87020564488462_2.37206698596504 chr11 3914477 3915015 + 2.37206698596504 NA promoter-TSS (NM_153142) promoter-TSS (NM_153142) -82 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak2_22_43_-1.2095233372678_4.8546699500034_2.37206698596504 chr16 91010449 91011018 + 2.37206698596504 NA promoter-TSS (NR_028368) promoter-TSS (NR_028368) 362 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak1_76_33_0.89337161092085_5.53414864671076_2.37128583915356 chr2 154436545 154437069 + 2.37128583915356 NA intron (NM_172860, intron 1 of 10) CpG 323 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding common_peak1_192_107_0.542264868306724_7.02601993631683_2.36982179788673 chr14 69691294 69693551 + 2.36982179788673 NA TTS (NR_105915) TTS (NR_105915) 174 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak1_188_213_-0.474316065500101_7.5043089536511_2.36963936509477 chr1 91053393 91055975 + 2.36963936509477 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 1240 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-3 chr10 111368474 111368786 + 2.36932189928148 NA Intergenic B1_Mur4|SINE|Alu 69951 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148 chr19 32179877 32180079 + 2.36932189928148 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 31035 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-41 chr2 129259038 129259267 + 2.36932189928148 NA Intergenic Intergenic 38060 NM_181589 70466 Mm.45785 NM_181589 ENSMUSG00000048327 Ckap2l 2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm cytoskeleton associated protein 2-like protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-44 chr2 152691853 152692131 + 2.36932189928148 NA intron (NM_010376, intron 8 of 11) intron (NM_010376, intron 8 of 11) 4844 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-56 chr5 147894442 147894675 + 2.36932189928148 NA 5' UTR (NM_027872, exon 1 of 6) 5' UTR (NM_027872, exon 1 of 6) 257 NM_001357002 71706 Mm.153218 NM_027872 ENSMUSG00000029650 Slc46a3 1200006F02Rik solute carrier family 46, member 3 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-15 chr13 34332540 34332733 + 2.36932189928148 NA intron (NM_001033167, intron 1 of 10) intron (NM_001033167, intron 1 of 10) 12546 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-71 chrX 159627040 159627318 + 2.36932189928148 NA promoter-TSS (NM_001135727) promoter-TSS (NM_001135727) -93 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-11 chr6 53725010 53725268 + 2.36932189928148 NA Intergenic Intergenic 95686 NM_025817 66873 Mm.422727 NM_025817 ENSMUSG00000043496 Tril 1200009O22Rik|AI316813|mKIAA0644 TLR4 interactor with leucine-rich repeats protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-25 chr16 85062220 85062539 + 2.36932189928148 NA intron (NM_001198825, intron 5 of 15) intron (NM_001198825, intron 5 of 15) 90168 NR_045889 100038614 Mm.441351 NR_045889 ENSMUSG00000115518 Gm10791 - predicted gene 10791 ncRNA unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-19 chr2 180036663 180036896 + 2.36932189928148 NA intron (NM_001289476, intron 6 of 6) intron (NM_001289476, intron 6 of 6) 5685 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-3 chr11 32765591 32765809 + 2.36932189928148 NA Intergenic Intergenic 58894 NM_027050 69351 Mm.65488 NM_027050 ENSMUSG00000020270 Smim23 1700008A04Rik small integral membrane protein 23 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-68 chr8 61628640 61628852 + 2.36932189928148 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -37577 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-12 chr18 7122109 7122312 + 2.36932189928148 NA intron (NM_001357492, intron 20 of 20) ID4|SINE|ID -117431 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-28 chr18 57857973 57858195 + 2.36932189928148 NA Intergenic Intergenic -20594 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-53 chr5 35892896 35893163 + 2.36932189928148 NA promoter-TSS (NM_027373) promoter-TSS (NM_027373) -290 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-14 chr2 24442633 24442855 + 2.36932189928148 NA intron (NM_011040, intron 4 of 11) intron (NM_011040, intron 4 of 11) 32855 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-30 chr18 75462649 75462897 + 2.36932189928148 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -51872 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-34 chr2 6118786 6118982 + 2.36932189928148 NA intron (NM_144883, intron 1 of 3) intron (NM_144883, intron 1 of 3) 11301 NM_144883 227545 Mm.133542 NM_144883 ENSMUSG00000045319 Proser2 5430407P10Rik|AU067770 proline and serine rich 2 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-8 chr13 38320098 38320346 + 2.36932189928148 NA Intergenic Intergenic -25494 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-60 chr6 91260261 91260667 + 2.36932189928148 NA intron (NM_007992, intron 9 of 17) intron (NM_007992, intron 9 of 17) 47700 NM_007992 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-7 chr10 58405623 58405846 + 2.36932189928148 NA intron (NM_001359116, intron 2 of 9) intron (NM_001359116, intron 2 of 9) 11361 NM_001346676 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-2 chr1 88556981 88557338 + 2.36932189928148 NA intron (NR_037971, intron 3 of 5) intron (NR_037971, intron 3 of 5) 5642 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-12 chr12 84430373 84430640 + 2.36932189928148 NA TTS (NM_001313967) TTS (NM_001313967) 13306 NM_025525 66381 Mm.24846 NM_025525 ENSMUSG00000098134 Rnf113a2 2310020H19Rik|AI426758|Rnf113a ring finger protein 113A2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-46 chr3 65868798 65869066 + 2.36932189928148 NA Intergenic Intergenic 89317 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-19 chr15 37790158 37790368 + 2.36932189928148 NA intron (NM_001359844, intron 1 of 7) intron (NM_001359844, intron 1 of 7) 1737 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-20 chr6 84002520 84002738 + 2.36932189928148 NA Intergenic Intergenic -5969 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148 chr1 69685466 69685736 + 2.36932189928148 NA intron (NM_011770, intron 1 of 7) intron (NM_011770, intron 1 of 7) 359 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-49 chr4 5678332 5678587 + 2.36932189928148 NA intron (NM_173426, intron 1 of 2) intron (NM_173426, intron 1 of 2) 34369 NM_173426 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-9 chr2 13725369 13725596 + 2.36932189928148 NA intron (NM_145838, intron 2 of 7) intron (NM_145838, intron 2 of 7) 68038 NM_145838 241230 Mm.330004 NM_145838 ENSMUSG00000003418 St8sia6 1700007J08Rik|AI314453|AI875066|ST8SiaVI|Siat8f ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-29 chr18 65312766 65313041 + 2.36932189928148 NA intron (NM_001037294, intron 4 of 12) LTR41B|LTR|ERVL 64042 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-13 chr19 23133844 23134240 + 2.36932189928148 NA Intergenic Intergenic -7184 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-9 chr12 27345765 27346036 + 2.36932189928148 NA Intergenic Intergenic -3182 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-33 chr19 29367851 29368274 + 2.36932189928148 NA intron (NM_021893, intron 1 of 6) intron (NM_021893, intron 1 of 6) 624 NM_021893 60533 Mm.245363 NM_021893 ENSMUSG00000016496 Cd274 A530045L16Rik|B7h1|Pdcd1l1|Pdcd1lg1|Pdl1 CD274 antigen protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-37 chr2 101722737 101722979 + 2.36932189928148 NA intron (NM_001355625, intron 8 of 8) intron (NM_001355625, intron 8 of 8) 44438 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-8 chr11 119684187 119684445 + 2.36932189928148 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 81411 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-13 chr13 5345529 5345820 + 2.36932189928148 NA Intergenic Intergenic 512418 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-66 chr7 100948014 100948330 + 2.36932189928148 NA intron (NM_183168, intron 1 of 2) intron (NM_183168, intron 1 of 2) -16011 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-10 chr5 90656497 90656722 + 2.36932189928148 NA Intergenic Intergenic -16082 NM_001310656 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-10 chr15 98675297 98675552 + 2.36932189928148 NA intron (NM_172612, intron 2 of 4) intron (NM_172612, intron 2 of 4) 2037 NM_172612 223881 Mm.274010 NM_172612 ENSMUSG00000054855 Rnd1 A830014L09Rik|Arhs Rho family GTPase 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-54 chr5 36136717 36137053 + 2.36932189928148 NA intron (NM_030889, intron 3 of 26) intron (NM_030889, intron 3 of 26) -67136 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-2 chr1 87620373 87620712 + 2.36932189928148 NA exon (NM_010566, exon 1 of 27) exon (NM_010566, exon 1 of 27) 230 NM_010566 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148 chr10 71115843 71116059 + 2.36932189928148 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 43739 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-39 chr2 125273050 125273351 + 2.36932189928148 NA Intergenic Intergenic 25685 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-20 chr15 64059323 64059622 + 2.36932189928148 NA intron (NM_001360037, intron 1 of 11) MIRb|SINE|MIR 292 NM_001360038 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-10 chr12 35265539 35265844 + 2.36932189928148 NA Intergenic Intergenic -70794 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-6 chr13 28527009 28527274 + 2.36932189928148 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 183732 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-51 chr4 48044740 48044952 + 2.36932189928148 NA promoter-TSS (NM_015743) promoter-TSS (NM_015743) -459 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-22 chr8 60769490 60769707 + 2.36932189928148 NA Intergenic Intergenic 114041 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-8 chr18 8845091 8845456 + 2.36932189928148 NA Intergenic Intergenic -367583 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-52 chr5 31861311 31861517 + 2.36932189928148 NA intron (NM_144541, intron 6 of 11) intron (NM_144541, intron 6 of 11) 163364 NM_144541 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Babam2 6030405P19Rik|AI429776|B830038C02Rik|Bre BRISC and BRCA1 A complex member 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-6 chr10 17804710 17804957 + 2.36932189928148 NA intron (NM_138628, intron 2 of 9) intron (NM_138628, intron 2 of 9) 8614 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-43 chr2 137411180 137411444 + 2.36932189928148 NA Intergenic Intergenic -294792 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-58 chr6 66942928 66943147 + 2.36932189928148 NA intron (NM_001177556, intron 2 of 3) intron (NM_001177556, intron 2 of 3) 46146 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148 chr1 17487908 17488302 + 2.36932189928148 NA Intergenic Intergenic -113796 NM_053191 94227 Mm.442452 NM_053191 ENSMUSG00000067780 Pi15 P24TI|P25TI|PI-15|SugarCrisp peptidase inhibitor 15 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-11 chr12 75532003 75532371 + 2.36932189928148 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 64013 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-27 chr17 73590232 73590523 + 2.36932189928148 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 120074 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-4 chr1 160596755 160596959 + 2.36932189928148 NA intron (NM_013862, intron 13 of 20) intron (NM_013862, intron 13 of 20) -19104 NM_001146330 620246 Mm.478780 NM_001146330 Gpr52 EG620246 G protein-coupled receptor 52 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-21 chr7 67704723 67704951 + 2.36932189928148 NA intron (NM_001360653, intron 8 of 11) intron (NM_001360653, intron 8 of 11) 54905 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-7 chr13 34368345 34368592 + 2.36932189928148 NA Intergenic Intergenic -23286 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-7 chr17 84272460 84272681 + 2.36932189928148 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -84623 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-15 chr2 60716759 60716997 + 2.36932189928148 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 5725 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-21 chr15 99356382 99356583 + 2.36932189928148 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 14000 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-35 chr2 27809728 27809974 + 2.36932189928148 NA Intergenic Intergenic -76574 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-31 chr19 8724920 8725214 + 2.36932189928148 NA promoter-TSS (NR_004445) promoter-TSS (NR_004445) -799 NR_004445 100127111 Mm.292489 NR_004445 ENSMUSG00000065087 Snord22 Rnu22|U22 small nucleolar RNA, C/D box 22 snoRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-18 chr13 97503843 97504077 + 2.36932189928148 NA Intergenic Intergenic 21259 NR_110431 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-48 chr3 105894813 105895032 + 2.36932189928148 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -9499 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-64 chr7 35141885 35142187 + 2.36932189928148 NA Intergenic Intergenic 22743 NM_007678 12606 Mm.349667 NM_007678 ENSMUSG00000034957 Cebpa C/ebpalpha|CBF-A|Cebp CCAAT/enhancer binding protein (C/EBP), alpha protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-38 chr2 105795181 105795435 + 2.36932189928148 NA intron (NM_023876, intron 7 of 9) intron (NM_023876, intron 7 of 9) 109256 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-40 chr2 127715039 127715240 + 2.36932189928148 NA intron (NM_145532, intron 1 of 3) intron (NM_145532, intron 1 of 3) 14758 NM_145532 228576 Mm.133036 NM_145532 ENSMUSG00000027377 Mall BC012256|BENE mal, T cell differentiation protein-like protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-57 chr6 49794272 49794560 + 2.36932189928148 NA Intergenic Intergenic -28294 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-45 chr2 152931279 152931523 + 2.36932189928148 NA TTS (NM_010226) TTS (NM_010226) 1807 NM_010226 14239 Mm.205798 NM_010226 ENSMUSG00000074676 Foxs1 FREAC10|Fkh3|Fkhl18 forkhead box S1 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-18 chr2 173742975 173743309 + 2.36932189928148 NA intron (NM_019806, intron 1 of 5) intron (NM_019806, intron 1 of 5) 5571 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-6 chr17 66369555 66369781 + 2.36932189928148 NA intron (NM_172963, intron 6 of 13) intron (NM_172963, intron 6 of 13) 80082 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-14 chr9 111460341 111460604 + 2.36932189928148 NA intron (NM_172928, intron 1 of 4) intron (NM_172928, intron 1 of 4) 21391 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-22 chr16 8854746 8855007 + 2.36932189928148 NA intron (NM_001081400, intron 3 of 3) intron (NM_001081400, intron 3 of 3) 24776 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-23 chr8 64059877 64060217 + 2.36932189928148 NA intron (NM_009390, intron 12 of 20) intron (NM_009390, intron 12 of 20) -107877 NM_001195687 244495 Mm.485331 NM_001195687 ENSMUSG00000094443 Sgo2b EG244495|Gm4975|Sgol2b shugoshin 2B protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-16 chr13 52084917 52085157 + 2.36932189928148 NA Intergenic Intergenic -11704 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-69 chr9 66713754 66714049 + 2.36932189928148 NA exon (NM_001306148, exon 1 of 10) exon (NM_001306148, exon 1 of 10) 215 NM_001306148 76459 Mm.277921 NM_178396 ENSMUSG00000032373 Car12 2310047E01Rik|AI314958|CA-XII|Ca12 carbonic anhydrase 12 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-4 chr11 99223191 99223398 + 2.36932189928148 NA intron (NM_020618, intron 4 of 10) intron (NM_020618, intron 4 of 10) 7723 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-5 chr12 99259444 99259786 + 2.36932189928148 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -96807 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-47 chr3 79532452 79532743 + 2.36932189928148 NA intron (NM_001162999, intron 1 of 16) intron (NM_001162999, intron 1 of 16) 35082 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-50 chr4 35068767 35069090 + 2.36932189928148 NA intron (NM_178061, intron 2 of 3) intron (NM_178061, intron 2 of 3) -83127 NM_199157 387510 Mm.386929 NM_199157 ENSMUSG00000042993 Ifnk - interferon kappa protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-65 chr7 66595601 66595827 + 2.36932189928148 NA Intergenic Intergenic 93847 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-61 chr6 133960162 133960384 + 2.36932189928148 NA Intergenic Intergenic -75427 NM_001303102 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-70 chrX 136691629 136691853 + 2.36932189928148 NA Intergenic Intergenic -16241 NM_001356367 237052 Mm.40713 NM_146236 ENSMUSG00000049536 Tceal1 0610011M09Rik|BC011290|P21|SIIR|pp21 transcription elongation factor A (SII)-like 1 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-17 chr2 156839574 156839823 + 2.36932189928148 NA promoter-TSS (NM_173396) promoter-TSS (NM_173396) -309 NM_001291124 228839 Mm.315625 NM_173396 ENSMUSG00000062175 Tgif2 4921501K24|5730599O09Rik|C80753|C81206 TGFB-induced factor homeobox 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-42 chr2 129817908 129818152 + 2.36932189928148 NA intron (NM_183262, intron 3 of 3) intron (NM_183262, intron 3 of 3) -16571 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-59 chr6 89461130 89461448 + 2.36932189928148 NA intron (NM_001167736, intron 4 of 6) intron (NM_001167736, intron 4 of 6) -98676 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-5 chr15 84512282 84512587 + 2.36932189928148 NA Intergenic Intergenic 45389 NM_177630 223732 Mm.6471 NM_177630 ENSMUSG00000055745 Rtl6 BC058638|Ldoc1l|Mar6|Mart6 retrotransposon Gag like 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-62 chr6 146726635 146726871 + 2.36932189928148 NA intron (NM_001346666, intron 1 of 11) intron (NM_001346666, intron 1 of 11) 1823 NM_172734 232533 Mm.322121 NM_172734 ENSMUSG00000001630 Stk38l 4930473A22Rik|Ndr2|Ndr54 serine/threonine kinase 38 like protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-9 chr15 30911752 30911978 + 2.36932189928148 NA intron (NM_001355502, intron 15 of 21) intron (NM_001355502, intron 15 of 21) -127261 NR_045186 73784 Mm.66947 NR_045186 ENSMUSG00000115474 4930430F21Rik - RIKEN cDNA 4930430F21 gene ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-5 chr10 8812010 8812222 + 2.36932189928148 NA intron (NM_175155, intron 4 of 19) AT_rich|Low_complexity|Low_complexity 73954 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-17 chr13 63080025 63080227 + 2.36932189928148 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) 115233 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-13 chr7 110370762 110370979 + 2.36932189928148 NA intron (NM_177324, intron 21 of 40) intron (NM_177324, intron 21 of 40) 149167 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-16 chr2 72157938 72158182 + 2.36932189928148 NA intron (NM_001355478, intron 3 of 26) intron (NM_001355478, intron 3 of 26) 103443 NM_001204166 56508 Mm.196153 NM_019688 ENSMUSG00000049044 Rapgef4 1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040 Rap guanine nucleotide exchange factor (GEF) 4 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-26 chr17 65725890 65726106 + 2.36932189928148 NA intron (NM_133685, intron 1 of 6) intron (NM_133685, intron 1 of 6) 46754 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-32 chr19 16289826 16290062 + 2.36932189928148 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 25060 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-24 chr9 116219506 116219720 + 2.36932189928148 NA Intergenic Intergenic 30433 NR_152204 100043817 Mm.404276 NR_152204 Gm4668 - predicted gene 4668 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-36 chr2 71787957 71788176 + 2.36932189928148 NA intron (NM_008397, intron 1 of 25) intron (NM_008397, intron 1 of 25) 1127 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-23 chr16 10287765 10288002 + 2.36932189928148 NA intron (NM_007929, intron 3 of 4) intron (NM_007929, intron 3 of 4) 26085 NM_007929 13731 Mm.246009 NM_007929 ENSMUSG00000022505 Emp2 XMP epithelial membrane protein 2 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-67 chr7 139208911 139209153 + 2.36932189928148 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) -3956 NM_027164 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-12 chr7 68074342 68074681 + 2.36932189928148 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 122254 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-55 chr5 138164768 138164971 + 2.36932189928148 NA TTS (NR_029749) TTS (NR_029749) 535 NR_029787 723926 NR_029787 ENSMUSG00000065394 Mir25 Mirn25|mir-25|mmu-mir-25 microRNA 25 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-24 chr16 45335493 45335695 + 2.36932189928148 NA Intergenic Intergenic 73459 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-2 chr10 93704598 93704903 + 2.36932189928148 NA intron (NM_021320, intron 3 of 9) intron (NM_021320, intron 3 of 9) -21428 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-14 chr13 6461680 6461950 + 2.36932189928148 NA Intergenic Intergenic -86342 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak2_3_13_-2.06320491869332_2.77575246271094_2.36932189928148-11 chr16 12742851 12743068 + 2.36932189928148 NA Intergenic Intergenic -68431 NR_040507 75493 Mm.396146 NR_040507 ENSMUSG00000101565 1700003L19Rik - RIKEN cDNA 1700003L19 gene ncRNA unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-63 chr7 19920016 19920305 + 2.36932189928148 NA intron (NM_027514, intron 1 of 7) B1_Mur1|SINE|Alu 983 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding unique_peak2_2_13_-2.47531433689262_2.56969775361129_2.36932189928148-4 chr11 54926833 54927102 + 2.36932189928148 NA intron (NM_001271456, intron 9 of 18) intron (NM_001271456, intron 9 of 18) 24113 NM_008161 14778 Mm.200916 NM_008161 ENSMUSG00000018339 Gpx3 AA960521|EGPx|GPx|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding unique_peak1_15_3_1.7300400442178_2.8650200221089_2.36932189928148-3 chr1 135018954 135019202 + 2.36932189928148 NA intron (NM_001033409, intron 6 of 17) intron (NM_001033409, intron 6 of 17) 56513 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding common_peak2_67_28_0.944794882635636_5.33037843644539_2.36704399216973 chr3 81030098 81030305 + 2.36704399216973 NA Intergenic Intergenic -6215 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_33_56_-1.02305915682829_5.3213604357506_2.36704399216973 chr4 129696215 129697125 + 2.36704399216973 NA intron (NM_001356378, intron 1 of 9) CpG 175 NM_199305 230770 Mm.257157 NM_199305 ENSMUSG00000053730 Tmem39b 6330509E05Rik|BC037095 transmembrane protein 39b protein-coding common_peak1_165_89_0.589415544987999_6.78656086882367_2.36696225576635 chr5 137785257 137786669 + 2.36696225576635 NA exon (NM_144913, exon 1 of 4) exon (NM_144913, exon 1 of 4) 738 NM_144913 231803 Mm.61193 NM_144913 ENSMUSG00000029726 Mepce Bcdin3|D5Wsu46e methylphosphate capping enzyme protein-coding common_peak2_108_135_-0.608767956121893_6.78307886318939_2.36696225576635 chr4 136141809 136143686 + 2.36696225576635 NA Intergenic Intergenic -1075 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak1_78_105_-0.710352788287922_6.37274406041924_2.3640572083633 chr11 98682636 98683467 + 2.3640572083633 NA intron (NM_009439, intron 1 of 11) intron (NM_009439, intron 1 of 11) 497 NM_009439 22123 Mm.12194 NM_009439 ENSMUSG00000017221 Psmd3 AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding common_peak2_103_130_-0.621994786228826_6.72242560842304_2.3614546671685 chr2 180227496 180229585 + 2.3614546671685 NA Intergenic Intergenic -2681 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak1_81_36_0.861506201971488_5.64020646661469_2.35878721299899 chr6 6216502 6217288 + 2.35878721299899 NA intron (NM_001177572, intron 1 of 17) CpG 278 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_81_36_0.861506201971488_5.64020646661469_2.35878721299899-2 chr6 117841224 117841654 + 2.35878721299899 NA intron (NM_001346650, intron 1 of 2) CpG 164 NM_001346652 232337 Mm.290847 NM_177684 ENSMUSG00000059689 Zfp637 AI646709|BC021601|Znf32 zinc finger protein 637 protein-coding common_peak1_117_58_0.709703056387593_6.23749457755564_2.35832031755066 chr5 31635014 31636943 + 2.35832031755066 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 22027 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_226_249_-0.436191974567242_7.74768829737847_2.35791268679802 chr8 54561295 54563241 + 2.35791268679802 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 11937 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak2_57_83_-0.817404401401494_5.98361522207801_2.35648075798278 chr10 80961373 80962565 + 2.35648075798278 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 31878 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_58_83_-0.792916337456081_5.99585925405072_2.35648075798278 chr13 42328906 42329661 + 2.35648075798278 NA Intergenic Intergenic 27807 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_101_48_0.768901635875453_5.99916066205293_2.35648075798278 chr2 90940455 90941311 + 2.35648075798278 NA intron (NM_198683, intron 1 of 13) CpG 486 NM_017368 13046 Mm.29495 NM_017368 ENSMUSG00000005506 Celf1 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50 CUGBP, Elav-like family member 1 protein-coding common_peak2_57_83_-0.817404401401494_5.98361522207801_2.35648075798278-2 chr7 144915114 144915961 + 2.35648075798278 NA intron (NM_001361263, intron 1 of 4) intron (NM_001361263, intron 1 of 4) 437 NM_001347537 72284 Mm.273049 NM_028184 ENSMUSG00000031072 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 protein-coding common_peak2_114_141_-0.594291898527794_6.85260117024078_2.35604446562178 chr9 96783544 96784896 + 2.35604446562178 NA Intergenic Intergenic 18658 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_219_242_-0.44009016140133_7.70476742290512_2.35590693604904 chr13 42301658 42305106 + 2.35590693604904 NA intron (NM_010104, intron 1 of 4) intron (NM_010104, intron 1 of 4) 1906 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_146_77_0.621736547158016_6.59627049244126_2.35562795163048 chr15 99584621 99585880 + 2.35562795163048 NA TTS (NM_009699) TTS (NM_009699) -5778 NM_009701 11830 Mm.45580 NM_009701 ENSMUSG00000044217 Aqp5 - aquaporin 5 protein-coding common_peak1_86_39_0.833820528717358_5.73883835924604_2.35199658438495 chr13 75839986 75840884 + 2.35199658438495 NA intron (NM_053108, intron 1 of 2) intron (NM_053108, intron 1 of 2) 549 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_46_71_-0.896263698140258_5.72179315237218_2.35199658438495 chr9 44379583 44380214 + 2.35199658438495 NA intron (NM_021395, intron 1 of 25) intron (NM_021395, intron 1 of 25) 408 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding common_peak2_137_164_-0.549688289795351_7.09147806934814_2.35169795718343 chr1 30872502 30874100 + 2.35169795718343 NA Intergenic CpG -10045 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak2_54_79_-0.823095793536424_5.91038019811915_2.35156382971582 chr16 30502018 30503226 + 2.35156382971582 NA Intergenic (CGAG)n|Simple_repeat|Simple_repeat 47956 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak1_96_45_0.788048598354065_5.91758625523405_2.35156382971581 chr9 52167590 52168892 + 2.35156382971581 NA promoter-TSS (NM_001162921) promoter-TSS (NM_001162921) -130 NM_001162921 244871 Mm.295686 NM_001162921 ENSMUSG00000035164 Zc3h12c A230108E06|C230027N18Rik|mKIAA1726 zinc finger CCCH type containing 12C protein-coding common_peak1_95_45_0.773203731241749_5.91016382167789_2.35156382971581 chr14 45657223 45658633 + 2.35156382971581 NA TTS (NR_039593) TTS (NR_039593) 125 NR_039593 100628600 NR_039593 ENSMUSG00000093167 Mir5131 mmu-mir-5131|mu-mir-5131 microRNA 5131 ncRNA common_peak1_183_208_-0.478615789431116_7.46805123736532_2.35050743546874 chr8 102783901 102785086 + 2.35050743546874 NA intron (NM_009866, intron 1 of 12) CpG 618 NM_009866 12552 Mm.1571 NM_009866 ENSMUSG00000031673 Cdh11 Cad11|OSF-4 cadherin 11 protein-coding common_peak1_90_42_0.793877489753901_5.82320349957905_2.34985861513818 chr15 89591150 89592197 + 2.34985861513818 NA intron (NM_026817, intron 1 of 8) CpG 250 NM_026817 68708 Mm.23258 NM_026817 ENSMUSG00000022621 Rabl2 1110031N17Rik|AW549303|Rabl2a RAB, member RAS oncogene family-like 2 protein-coding common_peak1_50_75_-0.857261053879679_5.81929698650375_2.34985861513818 chr9 44379623 44380404 + 2.34985861513818 NA intron (NM_021395, intron 1 of 25) intron (NM_021395, intron 1 of 25) 523 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding unique_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541-5 chr9 6169418 6169810 + 2.34940629829541 NA intron (NM_001357397, intron 1 of 6) intron (NM_001357397, intron 1 of 6) 1128 NM_001357397 71785 Mm.390122 NM_027924 ENSMUSG00000032006 Pdgfd 1110003I09Rik platelet-derived growth factor, D polypeptide protein-coding unique_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541-3 chr16 93906109 93906796 + 2.34940629829541 NA TTS (NM_028083) TTS (NM_028083) 22551 NM_028083 110749 Mm.274222 NM_028083 ENSMUSG00000022945 Chaf1b 2600017H24Rik|C76145|CAF-I p60|CAF-Ip60|CAF1|CAF1A|CAF1P60|MPHOSPH7 chromatin assembly factor 1, subunit B (p60) protein-coding unique_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541-4 chr4 86713318 86713861 + 2.34940629829541 NA Intergenic PB1D7|SINE|Alu -34966 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541-2 chr18 60632109 60632749 + 2.34940629829541 NA Intergenic Intergenic -8124 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak2_13_32_-1.50564004599328_4.29157409636181_2.34940629829541 chrX 7318558 7319063 + 2.34940629829541 NA intron (NM_001243762, intron 1 of 13) CpG 548 NM_001243762 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding unique_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541-2 chr12 86836444 86836776 + 2.34940629829541 NA Intergenic Intergenic 48204 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541 chr13 110399050 110399694 + 2.34940629829541 NA intron (NM_152804, intron 11 of 13) intron (NM_152804, intron 11 of 13) 4328 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding unique_peak2_14_32_-1.40680659458608_4.34099082206541_2.34940629829541 chr11 88447686 88448109 + 2.34940629829541 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 95124 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954-3 chr17 37061811 37062268 + 2.3494062982954 NA intron (NM_019439, intron 11 of 22) intron (NM_019439, intron 11 of 22) 16073 NM_019439 54393 Mm.32191 NM_019439 ENSMUSG00000024462 Gabbr1 GABAB1|GABAbR1|bM573K1.1 gamma-aminobutyric acid (GABA) B receptor, 1 protein-coding unique_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954 chr1 39571214 39571716 + 2.3494062982954 NA intron (NM_001033135, intron 1 of 6) PB1D11|SINE|Alu 5882 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4 ring finger protein 149 protein-coding unique_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954-6 chr7 64373876 64374374 + 2.3494062982954 NA promoter-TSS (NM_177893) promoter-TSS (NM_177893) -30 NM_177893 330554 Mm.236510 NM_177893 ENSMUSG00000033458 Fan1 6030441H18Rik|Mtmr15|mFAN1 FANCD2/FANCI-associated nuclease 1 protein-coding unique_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954-2 chr1 155028260 155028544 + 2.3494062982954 NA Intergenic Intergenic 54862 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954-5 chr3 101544414 101544928 + 2.3494062982954 NA Intergenic Intergenic 60036 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_38_12_1.30593405854148_4.35340674741183_2.3494062982954 chr4 130176428 130176714 + 2.3494062982954 NA Intergenic Intergenic -1449 NM_023476 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954-2 chr3 126335859 126336427 + 2.3494062982954 NA Intergenic Intergenic -27709 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding common_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954 chr16 45365447 45365985 + 2.3494062982954 NA Intergenic Intergenic 43337 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak1_38_12_1.30593405854148_4.35340674741183_2.3494062982954-4 chr19 56202156 56202492 + 2.3494062982954 NA Intergenic Intergenic -85588 NM_001329936 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding common_peak1_74_101_-0.729290877591732_6.30777990317563_2.34708327198643 chr3 103790515 103791109 + 2.34708327198643 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 463 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_123_62_0.686114636479621_6.32033724173973_2.34708327198641 chr3 121616450 121617439 + 2.34708327198641 NA Intergenic MLT2B4|LTR|ERVL 26541 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_122_62_0.674515246327976_6.3145375466639_2.34708327198641 chr3 38885068 38886837 + 2.34708327198641 NA promoter-TSS (NM_183221) promoter-TSS (NM_183221) -988 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-14 chr8 34474121 34474698 + 2.34622402919155 NA Intergenic Intergenic 165907 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155-5 chr2 91256813 91257265 + 2.34622402919155 NA promoter-TSS (NM_028733) promoter-TSS (NM_028733) 226 NM_001289678 80708 Mm.236650 NM_028733 ENSMUSG00000027257 Pacsin3 4921507A02Rik|6330413E15Rik|AW413130 protein kinase C and casein kinase substrate in neurons 3 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-7 chr19 17269753 17270351 + 2.34622402919155 NA Intergenic Intergenic 69453 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-4 chr14 62837798 62838086 + 2.34622402919155 NA TTS (NR_106174) TTS (NR_106174) 221 NR_106174 102465889 NR_106174 ENSMUSG00000099245 Mir8098 Gm27462|mmu-mir-8098 microRNA 8098 ncRNA unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-9 chr4 40851623 40852040 + 2.34622402919155 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) -1693 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-3 chr14 54399147 54399707 + 2.34622402919155 NA intron (NM_011405, intron 4 of 11) intron (NM_011405, intron 4 of 11) 10045 NM_001253680 20540 Mm.142455 NM_011405 ENSMUSG00000000958 Slc7a7 AI790233|my+lat1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-13 chr6 145745765 145746265 + 2.34622402919155 NA Intergenic Intergenic -62368 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155 chr10 81268290 81268536 + 2.34622402919155 NA intron (NM_018758, intron 1 of 10) intron (NM_018758, intron 1 of 10) 241 NM_018758 57267 Mm.293931 NM_018758 ENSMUSG00000004931 Apba3 AW208791|Mint-3|X11gamma|lin-10|mint3 amyloid beta (A4) precursor protein-binding, family A, member 3 protein-coding unique_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155-2 chr13 73803089 73803649 + 2.34622402919155 NA intron (NM_001360694, intron 17 of 24) intron (NM_001360694, intron 17 of 24) 39672 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-5 chr17 72917669 72918062 + 2.34622402919155 NA promoter-TSS (NM_029999) promoter-TSS (NM_029999) -440 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-11 chr6 17503927 17504568 + 2.34622402919155 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 40290 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-10 chr4 45010743 45011224 + 2.34622402919155 NA 5' UTR (NM_001163284, exon 1 of 2) 5' UTR (NM_001163284, exon 1 of 2) 1429 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding unique_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155-4 chr18 69416441 69416994 + 2.34622402919155 NA intron (NM_001361128, intron 3 of 19) intron (NM_001361128, intron 3 of 19) 70557 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155-3 chr13 104514394 104514824 + 2.34622402919155 NA Intergenic Intergenic 226774 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-6 chr18 57204761 57205180 + 2.34622402919155 NA intron (NM_001001979, intron 4 of 24) intron (NM_001001979, intron 4 of 24) 71880 NM_001001979 70417 Mm.297863 NM_001001979 ENSMUSG00000024593 Megf10 3000002B06Rik|Gm331 multiple EGF-like-domains 10 protein-coding unique_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155 chr12 10439129 10439783 + 2.34622402919155 NA Intergenic Intergenic -6932 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-15 chr9 59540378 59540758 + 2.34622402919155 NA intron (NM_010421, intron 1 of 13) intron (NM_010421, intron 1 of 13) 1028 NM_010421 15211 Mm.2284 NM_010421 ENSMUSG00000025232 Hexa Hex-1 hexosaminidase A protein-coding common_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155 chr18 53245454 53245679 + 2.34622402919155 NA promoter-TSS (NM_029394) promoter-TSS (NM_029394) -96 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-8 chr2 85047238 85047695 + 2.34622402919155 NA TTS (NM_001136081) TTS (NM_001136081) -2994 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak2_10_27_-1.61406956031405_4.00032014190058_2.34622402919155-6 chr9 24975685 24976062 + 2.34622402919155 NA intron (NR_153861, intron 2 of 4) intron (NR_153861, intron 2 of 4) 1665 NR_153861 102631612 Mm.410759 NR_153861 E130101E03Rik - RIKEN cDNA E130101E03 gene ncRNA unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155 chr1 87327909 87328411 + 2.34622402919155 NA intron (NM_146112, intron 1 of 28) intron (NM_146112, intron 1 of 28) 1162 NM_001110212 227331 Mm.23065 NM_146112 ENSMUSG00000048000 Gigyf2 2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642 GRB10 interacting GYF protein 2 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-2 chr13 98816572 98816863 + 2.34622402919155 NA Intergenic Intergenic -1268 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding unique_peak1_32_9_1.4451378895104_4.04449703964256_2.34622402919155-12 chr6 34750374 34750831 + 2.34622402919155 NA intron (NM_145575, intron 3 of 11) (GA)n|Simple_repeat|Simple_repeat -29830 NM_001289658 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak2_30_53_-1.07738298303744_5.21619601064475_2.34578757725673 chr8 91394822 91395506 + 2.34578757725673 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 81639 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_63_26_0.961042582907839_5.23540879361739_2.34578757725672-2 chr3 107797105 107797728 + 2.34578757725672 NA Intergenic Intergenic -36947 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_64_26_0.983252591472279_5.24651379789961_2.34578757725672 chr3 145988064 145988441 + 2.34578757725672 NA exon (NM_001166064, exon 1 of 7) exon (NM_001166064, exon 1 of 7) 382 NM_001166064 214804 Mm.268854 NM_001166064 ENSMUSG00000036863 Syde2 C430017H16Rik synapse defective 1, Rho GTPase, homolog 2 (C. elegans) protein-coding common_peak1_63_26_0.961042582907839_5.23540879361739_2.34578757725672 chr14 57998754 57999262 + 2.34578757725672 NA intron (NM_028643, intron 1 of 11) CpG 254 NM_028643 68514 Mm.26834 NM_028643 ENSMUSG00000021973 Micu2 1110008L20Rik|4833427E09Rik|AU041871|Efha1|Smhs2 mitochondrial calcium uptake 2 protein-coding unique_peak1_63_26_0.961042582907839_5.23540879361739_2.34578757725672 chr9 102731442 102732274 + 2.34578757725672 NA 3' UTR (NM_019764, exon 10 of 10) 3' UTR (NM_019764, exon 10 of 10) -7790 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_66_92_-0.757605793467643_6.16035591437421_2.3452191882619 chr10 99241452 99242083 + 2.3452191882619 NA Intergenic Intergenic -21464 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_112_55_0.722967779602648_6.16883881185893_2.34521918826188 chr15 74620866 74621905 + 2.34521918826188 NA intron (NM_001177437, intron 11 of 26) intron (NM_001177437, intron 11 of 26) 14933 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak1_111_55_0.710234212587832_6.16247202835152_2.34521918826188 chr11 49250206 49251176 + 2.34521918826188 NA intron (NM_001110150, intron 1 of 2) CpG 139 NM_001110150 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak1_72_31_0.904415435565927_5.45220771778296_2.34328043174784-2 chr13 102880797 102881835 + 2.34328043174784 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 121061 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak2_36_60_-0.999776596505445_5.43084903931016_2.34328043174784 chr17 72971249 72972335 + 2.34328043174784 NA Intergenic MER5A|DNA|hAT-Charlie 53487 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_72_31_0.904415435565927_5.45220771778296_2.34328043174784 chr10 96618583 96619456 + 2.34328043174784 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 2018 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_37_60_-0.961573883017739_5.44995039605402_2.34328043174784 chr5 32132706 32133703 + 2.34328043174784 NA Intergenic CpG -3268 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_129_66_0.664995923604732_6.39858715226014_2.33961784559931 chr4 139092032 139092989 + 2.33961784559931 NA intron (NM_008675, intron 1 of 3) CpG 460 NM_008675 17965 Mm.9404 NM_008675 ENSMUSG00000041120 Nbl1 D4H1S1733E|DAN|Dana|NO3 neuroblastoma, suppression of tumorigenicity 1 protein-coding common_peak2_151_177_-0.520679935567739_7.21539346318253_2.33810062293243 chr19 11911675 11913323 + 2.33810062293243 NA promoter-TSS (NM_172635) promoter-TSS (NM_172635) 100 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding common_peak2_153_82_0.598740041251021_6.67440945197244_2.33752000179538 chr14 105895419 105896819 + 2.33752000179538 NA intron (NM_011897, intron 1 of 1) CpG 700 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding common_peak1_94_121_-0.648971963837106_6.60625135564433_2.3346457454126 chr8 120908133 120909283 + 2.3346457454126 NA Intergenic C-rich|Low_complexity|Low_complexity 170069 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_107_52_0.737571416763716_6.09670616294506_2.33395341189245 chr7 19361446 19361984 + 2.33395341189245 NA intron (NM_001010836, intron 1 of 12) intron (NM_001010836, intron 1 of 12) 499 NM_001010836 333654 Mm.333640 NM_001010836 ENSMUSG00000040734 Ppp1r13l AV260376|IASPP|Nkip1|wa3 protein phosphatase 1, regulatory (inhibitor) subunit 13 like protein-coding common_peak1_107_52_0.737571416763716_6.09670616294506_2.33395341189245 chr15 57891794 57892427 + 2.33395341189245 NA intron (NM_024207, intron 1 of 7) CpG 308 NM_024207 67819 Mm.289387 NM_024207 ENSMUSG00000022365 Derl1 1110021N07Rik|AI195141|AW551338|Derlin-1 Der1-like domain family, member 1 protein-coding common_peak1_164_190_-0.504815904030599_7.32502087602045_2.33192919618713 chr15 77849012 77850333 + 2.33192919618713 NA Intergenic Intergenic -7497 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_71_97_-0.730053575015748_6.24968305660733_2.33139888666129 chr10 80602577 80603848 + 2.33139888666129 NA intron (NM_019575, intron 1 of 6) intron (NM_019575, intron 1 of 6) 330 NM_019575 56214 Mm.273170 NM_019575 ENSMUSG00000113949 Scamp4 2410022D05Rik|AI448940|AU022392|AW742369|Sc4 secretory carrier membrane protein 4 protein-coding common_peak2_60_24_1.00329987952815_5.1455061295388_2.32767243258581 chr14 76760742 76761436 + 2.32767243258581 NA intron (NR_153763, intron 1 of 1) intron (NR_153763, intron 1 of 1) 958 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_60_24_1.00329987952815_5.1455061295388_2.32767243258581 chr17 42875193 42875916 + 2.32767243258581 NA intron (NM_009847, intron 1 of 17) intron (NM_009847, intron 1 of 17) 870 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak1_60_24_1.00329987952815_5.1455061295388_2.32767243258581-2 chr2 125782086 125782682 + 2.32767243258581 NA intron (NM_177608, intron 1 of 17) intron (NM_177608, intron 1 of 17) 486 NM_177608 70354 Mm.138091 NM_133725 ENSMUSG00000035093 Secisbp2l 3110001I20Rik|AI504340|C630011I23 SECIS binding protein 2-like protein-coding unique_peak1_60_24_1.00329987952815_5.1455061295388_2.32767243258581 chr8 41126656 41127333 + 2.32767243258581 NA intron (NM_001005863, intron 1 of 13) intron (NM_001005863, intron 1 of 13) 6732 NM_001005863 102103 Mm.149438 NM_001005863 ENSMUSG00000045636 Mtus1 AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288 mitochondrial tumor suppressor 1 protein-coding common_peak2_225_130_0.489844720549557_7.27834536181223_2.32765437280812 chr3 126596391 126598284 + 2.32765437280812 NA 5' UTR (NM_001293665, exon 1 of 20) 5' UTR (NM_001293665, exon 1 of 20) 386 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_77_34_0.870035780164358_5.56430090702715_2.32761566727508 chr10 116270716 116271402 + 2.32761566727508 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -30315 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_77_34_0.870035780164358_5.56430090702715_2.32761566727508-2 chr6 89342648 89343711 + 2.32761566727508 NA intron (NM_008881, intron 4 of 31) intron (NM_008881, intron 4 of 31) 19434 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak2_77_34_0.870035780164358_5.56430090702715_2.32761566727508 chr15 99585242 99585734 + 2.32761566727508 NA TTS (NM_009699) TTS (NM_009699) -5540 NM_009701 11830 Mm.45580 NM_009701 ENSMUSG00000044217 Aqp5 - aquaporin 5 protein-coding common_peak2_40_64_-0.944353265854772_5.55019118010107_2.32761566727507 chr4 3574680 3575357 + 2.32761566727507 NA promoter-TSS (NR_149728) promoter-TSS (NR_149728) 139 NM_054089 116940 Mm.171323 NM_054089 ENSMUSG00000028233 Tgs1 D4Ertd800e|Ncoa6ip|Pimt trimethylguanosine synthase 1 protein-coding common_peak1_59_84_-0.785913370511817_6.01643425088179_2.32481912094628 chr6 35177355 35178080 + 2.32481912094628 NA intron (NM_027513, intron 1 of 42) CpG 101 NM_027513 70699 Mm.261208 NM_027513 ENSMUSG00000038759 Nup205 3830404O05Rik|AV248391|mKIAA0225 nucleoporin 205 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-16 chr11 109366489 109366700 + 2.32232533660526 NA intron (NM_010303, intron 2 of 3) intron (NM_010303, intron 2 of 3) -2940 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 - predicted gene 11696 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-76 chr9 110789849 110790098 + 2.32232533660526 NA Intergenic Intergenic -8212 NM_153099 235628 Mm.292285 NM_153099 ENSMUSG00000044664 Prss42 Tessp2 protease, serine 42 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-24 chr14 76009752 76010052 + 2.32232533660526 NA intron (NM_026816, intron 1 of 7) intron (NM_026816, intron 1 of 7) 963 NM_026816 68705 Mm.20415 NM_026816 ENSMUSG00000067995 Gtf2f2 1110031C13Rik|AI326315 general transcription factor IIF, polypeptide 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-52 chr4 58557802 58557995 + 2.32232533660526 NA Intergenic Intergenic -4407 NM_010336 14745 Mm.4772 NM_010336 ENSMUSG00000038668 Lpar1 AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1 lysophosphatidic acid receptor 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-70 chr8 84553641 84553853 + 2.32232533660526 NA intron (NM_001252060, intron 17 of 47) intron (NM_001252060, intron 17 of 47) 109105 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-56 chr5 39511494 39511752 + 2.32232533660526 NA intron (NR_045416, intron 2 of 5) intron (NR_045416, intron 2 of 5) 91951 NR_045416 75095 Mm.332354 NR_045416 ENSMUSG00000106741 4930513D17Rik - RIKEN cDNA 4930513D17 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-12 chr11 32605607 32605794 + 2.32232533660526 NA intron (NM_009288, intron 12 of 18) intron (NM_009288, intron 12 of 18) -36855 NM_001271348 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-13 chr5 64287025 64287379 + 2.32232533660526 NA intron (NM_001289514, intron 11 of 18) intron (NM_001289514, intron 11 of 18) 56845 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-34 chr17 30045133 30045376 + 2.32232533660526 NA intron (NR_151443, intron 1 of 4) intron (NR_151443, intron 1 of 4) 40215 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-69 chr8 40974004 40974198 + 2.32232533660526 NA intron (NM_026840, intron 2 of 5) intron (NM_026840, intron 2 of 5) -43367 NR_015457 78849 Mm.440930 NR_015457 ENSMUSG00000084960 B430010I23Rik - RIKEN cDNA B430010I23 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-27 chr15 12331011 12331253 + 2.32232533660526 NA intron (NM_025673, intron 1 of 3) intron (NM_025673, intron 1 of 3) 9636 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-10 chr2 52941107 52941400 + 2.32232533660526 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 83385 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-39 chr18 31937719 31938016 + 2.32232533660526 NA intron (NM_144862, intron 1 of 9) intron (NM_144862, intron 1 of 9) 6360 NM_144862 225341 Mm.24551 NM_144862 ENSMUSG00000024395 Lims2 PINCH2 LIM and senescent cell antigen like domains 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-25 chr14 104521597 104521807 + 2.32232533660526 NA intron (NM_026047, intron 1 of 5) intron (NM_026047, intron 1 of 5) 964 NM_026047 72486 Mm.291811 NM_026047 ENSMUSG00000022120 Rnf219 2610206B13Rik|2810449K13Rik|AI451544 ring finger protein 219 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-51 chr3 145897943 145898166 + 2.32232533660526 NA Intergenic Intergenic -26208 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-62 chr5 113931102 113931343 + 2.32232533660526 NA Intergenic Intergenic -22516 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-74 chr9 65363860 65364065 + 2.32232533660526 NA intron (NM_001111145, intron 1 of 6) intron (NM_001111145, intron 1 of 6) 2902 NM_001111145 208080 Mm.291862 NM_001111145 ENSMUSG00000086228 Ubap1l Gm514 ubiquitin-associated protein 1-like protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-43 chr2 131912137 131912324 + 2.32232533660526 NA 5' UTR (NM_011170, exon 2 of 3) 5' UTR (NM_011170, exon 2 of 3) 2302 NM_001278256 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-17 chr9 41542599 41542844 + 2.32232533660526 NA intron (NR_131930, intron 3 of 3) intron (NR_131930, intron 3 of 3) 6005 NR_029726 723965 NR_029726 ENSMUSG00000092770 Mirlet7a-2 Mirnlet7a-2|let-7a-2 microRNA let7a-2 ncRNA unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526 chr1 157364340 157364554 + 2.32232533660526 NA intron (NM_177644, intron 1 of 17) intron (NM_177644, intron 1 of 17) -47905 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-9 chr10 68267484 68267767 + 2.32232533660526 NA intron (NM_023598, intron 2 of 9) (TA)n|Simple_repeat|Simple_repeat 11101 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-30 chr15 81165617 81165960 + 2.32232533660526 NA intron (NM_001082536, intron 1 of 13) intron (NM_001082536, intron 1 of 13) 24969 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-4 chr1 170479837 170480097 + 2.32232533660526 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 77143 NM_027528 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-11 chr11 19834440 19834657 + 2.32232533660526 NA Intergenic Intergenic -89894 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-18 chr12 73462102 73462437 + 2.32232533660526 NA Intergenic Intergenic -52706 NR_046013 380765 Mm.490476 NR_046013 ENSMUSG00000056359 D830013O20Rik Gm891 RIKEN cDNA D830013O20 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-68 chr8 35851407 35851624 + 2.32232533660526 NA Intergenic Intergenic -24956 NM_027998 71908 Mm.37817 NM_027998 ENSMUSG00000055976 Cldn23 2310014B08Rik claudin 23 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-6 chr13 13574281 13574516 + 2.32232533660526 NA Intergenic Intergenic -16011 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-14 chr11 99509331 99509558 + 2.32232533660526 NA Intergenic Intergenic 11814 NM_213730 237934 Mm.484091 NM_213730 ENSMUSG00000064165 Krt39 4732494G06Rik|Ka35 keratin 39 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-42 chr2 27389976 27390173 + 2.32232533660526 NA intron (NM_009500, intron 1 of 27) intron (NM_009500, intron 1 of 27) 37534 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-8 chr17 34261253 34261469 + 2.32232533660526 NA Intergenic Intergenic -1866 NM_207105 14961 Mm.254067 NM_207105 ENSMUSG00000073421 H2-Ab1 AI845868|Abeta|H-2Ab|H2-Ab|I-Abeta|IAb|Ia-2|Ia2|Rmcs1 histocompatibility 2, class II antigen A, beta 1 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-15 chr7 49175845 49176044 + 2.32232533660526 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -13786 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-31 chr16 11021458 11021709 + 2.32232533660526 NA Intergenic Intergenic 12685 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-32 chr16 87567626 87567880 + 2.32232533660526 NA intron (NM_144854, intron 2 of 4) intron (NM_144854, intron 2 of 4) 14423 NM_144854 224419 Mm.194466 NM_144854 ENSMUSG00000025610 Map3k7cl C21orf7|ORF63|Tak1l Map3k7 C-terminal like protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-60 chr5 74948530 74948756 + 2.32232533660526 NA promoter-TSS (NR_045866) promoter-TSS (NR_045866) -551 NR_045866 619945 Mm.359372 NM_001037908 ENSMUSG00000072874 Gm6116 EG619945 predicted gene 6116 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-41 chr18 77987921 77988170 + 2.32232533660526 NA intron (NM_001195633, intron 23 of 43) intron (NM_001195633, intron 23 of 43) 49578 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-37 chr18 16759770 16759959 + 2.32232533660526 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 49382 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-2 chr10 75675645 75675855 + 2.32232533660526 NA intron (NM_172549, intron 29 of 36) intron (NM_172549, intron 29 of 36) -31742 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-17 chr12 40341846 40342109 + 2.32232533660526 NA intron (NM_178845, intron 4 of 11) intron (NM_178845, intron 4 of 11) 103813 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-8 chr10 39471252 39471487 + 2.32232533660526 NA intron (NM_001122893, intron 3 of 13) intron (NM_001122893, intron 3 of 13) 101570 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-72 chr9 13312981 13313194 + 2.32232533660526 NA Intergenic Intergenic 66131 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-2 chr1 54741490 54741837 + 2.32232533660526 NA intron (NM_001081433, intron 10 of 27) intron (NM_001081433, intron 10 of 27) -183979 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-67 chr7 144645295 144645560 + 2.32232533660526 NA intron (NM_001242349, intron 8 of 24) intron (NM_001242349, intron 8 of 24) -62991 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-13 chr11 96065991 96066185 + 2.32232533660526 NA promoter-TSS (NM_172300) promoter-TSS (NM_172300) -724 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-48 chr3 96849098 96849290 + 2.32232533660526 NA intron (NM_001146001, intron 1 of 8) intron (NM_001146001, intron 1 of 8) 16520 NM_001146001 59020 Mm.489677 NM_021517 ENSMUSG00000038298 Pdzk1 1700023D20Rik|2610507N21Rik|4921513F16Rik|AI267131|AI314638|AL022680|D3Ertd537e|NHERF-3|Pdzd1|mPDZK1|naPi-Cap1 PDZ domain containing 1 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-9 chr19 4800281 4800525 + 2.32232533660526 NA TTS (NM_019869) TTS (NM_019869) -6394 NM_001290123 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-38 chr18 30273255 30273497 + 2.32232533660526 NA intron (NR_151699, intron 1 of 24) intron (NR_151699, intron 1 of 24) 511 NR_151699 225326 Mm.194127 NM_181414 ENSMUSG00000033628 Pik3c3 5330434F23Rik|Vps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-40 chr18 64956545 64956733 + 2.32232533660526 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) -66888 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-16 chr8 26156627 26156865 + 2.32232533660526 NA Intergenic Intergenic -1423 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-44 chr3 52766425 52766671 + 2.32232533660526 NA intron (NR_038079, intron 1 of 3) intron (NR_038079, intron 1 of 3) 26824 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-6 chr10 17759935 17760144 + 2.32232533660526 NA Intergenic Intergenic -36180 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-63 chr6 4003928 4004118 + 2.32232533660526 NA promoter-TSS (NM_025331) promoter-TSS (NM_025331) 36 NM_025331 66066 Mm.25547 NM_025331 ENSMUSG00000032766 Gng11 0610037B21Rik guanine nucleotide binding protein (G protein), gamma 11 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-75 chr9 78367479 78367682 + 2.32232533660526 NA intron (NM_025274, intron 2 of 2) intron (NM_025274, intron 2 of 2) 619 NM_025274 434423 Mm.139314 NM_025274 ENSMUSG00000060461 Dppa5a AA536857|Dppa5|Esg1|ecat2 developmental pluripotency associated 5A protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-4 chr10 111714956 111715162 + 2.32232533660526 NA Intergenic Intergenic -120786 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-5 chr1 186251104 186251297 + 2.32232533660526 NA Intergenic Intergenic -133890 NM_146106 226791 Mm.257116 NM_146106 ENSMUSG00000039246 Lyplal1 BC027340|Q96AVO lysophospholipase-like 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-47 chr3 95684161 95684377 + 2.32232533660526 NA intron (NM_001301705, intron 4 of 17) intron (NM_001301705, intron 4 of 17) 3648 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-66 chr6 117054836 117055072 + 2.32232533660526 NA Intergenic Intergenic -113581 NM_001012477 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-20 chr13 17031099 17031308 + 2.32232533660526 NA intron (NM_138654, intron 12 of 13) intron (NM_138654, intron 12 of 13) 663562 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-5 chr12 10440081 10440308 + 2.32232533660526 NA Intergenic Intergenic -6194 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-19 chr12 108236656 108236846 + 2.32232533660526 NA intron (NM_001159910, intron 1 of 5) intron (NM_001159910, intron 1 of 5) 38666 NM_001159910 668158 Mm.482792 NM_001159910 ENSMUSG00000084883 Ccdc85c EG668158|Gm265|Gm9010|hhy coiled-coil domain containing 85C protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-71 chr8 109154312 109154519 + 2.32232533660526 NA intron (NR_151498, intron 1 of 4) intron (NR_151498, intron 1 of 4) 79193 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-65 chr6 54090609 54090856 + 2.32232533660526 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) 50800 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-15 chr11 101064405 101064610 + 2.32232533660526 NA TTS (NM_001243051) TTS (NM_001243051) -5587 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-46 chr3 90079058 90079334 + 2.32232533660526 NA promoter-TSS (NM_001293749) promoter-TSS (NM_001293749) -325 NM_001253738 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-55 chr4 133707646 133707878 + 2.32232533660526 NA intron (NM_001080819, intron 4 of 19) intron (NM_001080819, intron 4 of 19) 9346 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-35 chr17 73580095 73580310 + 2.32232533660526 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 130249 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-21 chr13 37453459 37453649 + 2.32232533660526 NA Intergenic Intergenic 108209 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-14 chr7 16444484 16444731 + 2.32232533660526 NA Intergenic B1_Mur4|SINE|Alu -8172 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-7 chr16 23269704 23269938 + 2.32232533660526 NA intron (NM_001252505, intron 2 of 7) intron (NM_001252505, intron 2 of 7) -20649 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-28 chr15 57885456 57885758 + 2.32232533660526 NA intron (NM_024207, intron 1 of 7) intron (NM_024207, intron 1 of 7) 6811 NM_024207 67819 Mm.289387 NM_024207 ENSMUSG00000022365 Derl1 1110021N07Rik|AI195141|AW551338|Derlin-1 Der1-like domain family, member 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-59 chr5 74171816 74172101 + 2.32232533660526 NA Intergenic LTR33A_|LTR|ERVL -23368 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-61 chr5 102046261 102046454 + 2.32232533660526 NA intron (NM_172882, intron 1 of 66) intron (NM_172882, intron 1 of 66) 23564 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-11 chr4 20147240 20147466 + 2.32232533660526 NA intron (NM_001290410, intron 5 of 5) ID_B1|SINE|B4 105301 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-36 chr17 80766792 80767058 + 2.32232533660526 NA Intergenic Intergenic -38900 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-64 chr6 49743771 49744070 + 2.32232533660526 NA Intergenic Intergenic -78790 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-3 chr1 74057293 74057535 + 2.32232533660526 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 67033 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-22 chr14 24104883 24105138 + 2.32232533660526 NA Intergenic Intergenic 16133 NR_106069 102465697 NR_106069 ENSMUSG00000105723 Mir7210 mir-7210|mmu-mir-7210 microRNA 7210 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-45 chr3 89091167 89091418 + 2.32232533660526 NA exon (NM_001083807, exon 2 of 10) exon (NM_001083807, exon 2 of 10) -1261 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-54 chr4 99930059 99930273 + 2.32232533660526 NA intron (NM_028132, intron 1 of 10) intron (NM_028132, intron 1 of 10) 715 NM_028132 72157 Mm.217764 NM_028132 ENSMUSG00000025791 Pgm2 2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1 phosphoglucomutase 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-73 chr9 62620954 62621180 + 2.32232533660526 NA Intergenic Intergenic -56788 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-49 chr3 144088276 144088500 + 2.32232533660526 NA Intergenic Intergenic 113944 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-10 chr10 122910966 122911297 + 2.32232533660526 NA intron (NM_001110218, intron 8 of 9) intron (NM_001110218, intron 8 of 9) 74593 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-58 chr5 72811398 72811588 + 2.32232533660526 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) 56955 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-29 chr15 78479825 78480018 + 2.32232533660526 NA TTS (NM_008368) TTS (NM_008368) -11287 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526 chr1 16129104 16129301 + 2.32232533660526 NA exon (NM_133832, exon 4 of 6) exon (NM_133832, exon 4 of 6) 23320 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-7 chr10 21800391 21800579 + 2.32232533660526 NA Intergenic Intergenic -81699 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-23 chr14 69731215 69731422 + 2.32232533660526 NA intron (NM_134078, intron 1 of 9) intron (NM_134078, intron 1 of 9) 1252 NM_134078 105513 Mm.159637 NM_134078 ENSMUSG00000034190 Chmp7 4930596K11Rik|6330407G04Rik|AI450338|AW550775 charged multivesicular body protein 7 protein-coding unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-3 chr10 95545508 95545746 + 2.32232533660526 NA TTS (NM_080560) TTS (NM_080560) 13694 NR_037212 100526463 NR_037212 ENSMUSG00000092867 Mir3058 mir-3058|mmu-mir-3058 microRNA 3058 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-53 chr4 63248232 63248426 + 2.32232533660526 NA intron (NM_025685, intron 7 of 60) L2b|LINE|L2 -8522 NR_030477 735262 NR_030477 ENSMUSG00000070102 Mir455 Mirn455|mir-455|mmu-mir-455 microRNA 455 ncRNA unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-57 chr5 43232048 43232298 + 2.32232533660526 NA intron (NR_028417, intron 1 of 7) intron (NR_028417, intron 1 of 7) -1290 NM_175937 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-26 chr14 121241697 121241888 + 2.32232533660526 NA intron (NM_134082, intron 11 of 26) intron (NM_134082, intron 11 of 26) -6914 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak2_1_11_-2.83375751778363_2.16808374182934_2.32232533660526-12 chr4 82502360 82502664 + 2.32232533660526 NA intron (NM_001286131, intron 1 of 9) intron (NM_001286131, intron 1 of 9) 3267 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-50 chr3 144681700 144681890 + 2.32232533660526 NA Intergenic Intergenic 38540 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak1_12_2_1.8476306533072_2.50877782737476_2.32232533660526-33 chr17 27156889 27157112 + 2.32232533660526 NA intron (NM_173027, intron 2 of 5) intron (NM_173027, intron 2 of 5) 10764 NM_173027 271424 Mm.209679 NM_173027 ENSMUSG00000024210 Ip6k3 D830007E07Rik|Ihpk3 inositol hexaphosphate kinase 3 protein-coding common_peak2_76_102_-0.705666075012029_6.3336674896772_2.32180062021758 chr4 102570069 102571340 + 2.32180062021758 NA exon (NM_001177980, exon 1 of 10) exon (NM_001177980, exon 1 of 10) 644 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak2_16_35_-1.35303916453262_4.493405419176_2.32006591355687 chr9 59723575 59724252 + 2.32006591355687 NA Intergenic Intergenic 16149 NM_001033498 546134 Mm.297580 NM_001033498 ENSMUSG00000074259 Gramd2 BC064463|Gramd2a GRAM domain containing 2 protein-coding unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-2 chr11 77793455 77793843 + 2.32006591355686 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) -7649 NM_001291214 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-2 chr13 5302502 5303150 + 2.32006591355686 NA Intergenic Intergenic 555266 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-4 chr18 36783297 36784034 + 2.32006591355686 NA promoter-TSS (NM_008214) promoter-TSS (NM_008214) 456 NM_080636 70791 Mm.282700 NM_080636 ENSMUSG00000019143 Hars2 4631412B19Rik|HARSR|HO3|Harsl histidyl-tRNA synthetase 2 protein-coding unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-5 chr3 122062338 122062972 + 2.32006591355686 NA exon (NM_007378, exon 5 of 50) exon (NM_007378, exon 5 of 50) 18195 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686 chr11 21370323 21370773 + 2.32006591355686 NA promoter-TSS (NM_139297) promoter-TSS (NM_139297) 81 NM_139297 216558 Mm.28877 NM_139297 ENSMUSG00000001891 Ugp2 UDPGP|UGPase UDP-glucose pyrophosphorylase 2 protein-coding unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-7 chr9 49980293 49980971 + 2.32006591355686 NA Intergenic Intergenic -181239 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-2 chr3 22091083 22091539 + 2.32006591355686 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 14659 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-7 chr5 149079210 149079625 + 2.32006591355686 NA Intergenic Intergenic -26360 NM_010439 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-4 chr2 131711779 131712756 + 2.32006591355686 NA Intergenic Intergenic 135389 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-3 chr15 85702813 85703397 + 2.32006591355686 NA promoter-TSS (NR_110483) promoter-TSS (NR_110483) -668 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-8 chr7 28921954 28922383 + 2.32006591355686 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 40164 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-6 chr5 115574192 115574553 + 2.32006591355686 NA intron (NM_172719, intron 2 of 57) intron (NM_172719, intron 2 of 57) -6577 NR_105996 102466790 NR_105996 ENSMUSG00000099047 Mir7029 Gm27293|mmu-mir-7029 microRNA 7029 ncRNA common_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686 chr10 96801146 96801738 + 2.32006591355686 NA Intergenic Intergenic 184441 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-6 chr5 103518659 103519432 + 2.32006591355686 NA intron (NM_011204, intron 9 of 47) intron (NM_011204, intron 9 of 47) 93853 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding common_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-3 chr8 94269713 94270009 + 2.32006591355686 NA intron (NM_001357268, intron 1 of 20) intron (NM_001357268, intron 1 of 20) 1255 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686-5 chr4 3770860 3771580 + 2.32006591355686 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 56256 NR_028126 70720 Mm.445696 NR_028126 6330407A03Rik - RIKEN cDNA 6330407A03 gene ncRNA common_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686 chr11 86919681 86920179 + 2.32006591355686 NA Intergenic Intergenic 73832 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak1_41_14_1.20564410041086_4.50971264581395_2.32006591355686 chr1 74027310 74027768 + 2.32006591355686 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 96908 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_42_14_1.23935193460091_4.52656656290898_2.32006591355686-3 chr17 26933173 26933761 + 2.32006591355686 NA TTS (NM_053173) TTS (NM_053173) 340 NR_126158 21652 Mm.258953 NM_009343 ENSMUSG00000024193 Phf1 AW557215|D17Ertd455e|Pcl1|Phf2|Tctex3 PHD finger protein 1 protein-coding common_peak2_234_136_0.481176159948918_7.33862016293499_2.31938814053781 chr6 146888585 146890147 + 2.31938814053781 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 872 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_82_37_0.840396107447333_5.66812556716725_2.31837299254141 chr5 108131847 108132574 + 2.31837299254141 NA promoter-TSS (NM_028481) promoter-TSS (NM_028481) 410 NM_001347383 73130 Mm.363960 NM_028876 ENSMUSG00000063406 Tmed5 3110020O18Rik|4432412D15Rik|p24gamma2 transmembrane p24 trafficking protein 5 protein-coding common_peak1_154_83_0.590734035954656_6.68768444075609_2.31783141959767 chr19 4229643 4230517 + 2.31783141959767 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) -1813 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak2_34_57_-1.00662500258177_5.35466849383669_2.3171515282213 chr1 118660497 118661161 + 2.3171515282213 NA intron (NM_023755, intron 7 of 14) intron (NM_023755, intron 7 of 14) 32884 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak1_68_29_0.91679830841519_5.36528974981611_2.3171515282213 chr4 32569564 32570015 + 2.3171515282213 NA intron (NR_026843, intron 1 of 4) intron (NR_026843, intron 1 of 4) 1873 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak2_299_316_-0.379314524906132_8.11868176768634_2.31676817808713 chr3 135438462 135440982 + 2.31676817808713 NA 5' UTR (NM_025356, exon 2 of 8) 5' UTR (NM_025356, exon 2 of 8) 596 NM_001356597 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak2_81_107_-0.68392793456303_6.41292353488195_2.31575603329713 chr10 111599380 111600993 + 2.31575603329713 NA Intergenic Intergenic -5913 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_130_67_0.654599467192051_6.41476257484636_2.31575603329711 chr5 35673413 35674701 + 2.31575603329711 NA intron (NM_001042615, intron 1 of 6) intron (NM_001042615, intron 1 of 6) 5723 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_51_76_-0.848303345813032_5.84263486778839_2.31448767722894-2 chr9 67234454 67235490 + 2.31448767722894 NA intron (NM_001081242, intron 53 of 57) intron (NM_001081242, intron 53 of 57) 1754 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak1_51_76_-0.848303345813032_5.84263486778839_2.31448767722894 chr10 24479850 24480658 + 2.31448767722894 NA Intergenic Intergenic -115188 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_51_76_-0.848303345813032_5.84263486778839_2.31448767722894 chr10 24479793 24480771 + 2.31448767722894 NA Intergenic Intergenic -115160 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_92_43_0.791853523142939_5.85535838020877_2.31448767722893 chr9 54950863 54951509 + 2.31448767722893 NA promoter-TSS (NM_145229) promoter-TSS (NM_145229) -232 NM_145229 246735 Mm.473773 NM_145229 ENSMUSG00000044820 AY074887 Mcpr1 cDNA sequence AY074887 protein-coding common_peak2_47_72_-0.886003892008012_5.74682261287601_2.3143103671394 chr8 71469120 71469987 + 2.3143103671394 NA intron (NM_001294259, intron 1 of 3) CpG 359 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak1_87_40_0.814568418405732_5.76483621382095_2.3143103671394 chr4 45107450 45108120 + 2.3143103671394 NA intron (NM_001134646, intron 1 of 2) CpG 328 NM_001134646 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 protein-coding common_peak1_95_122_-0.645748818040477_6.619640096319_2.31409113687013 chr7 130646212 130646804 + 2.31409113687013 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -46048 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_56_22_1.02643710071559_5.03678050641481_2.31341073667531-2 chr3 89411023 89411679 + 2.31341073667531 NA non-coding (NR_155545, exon 2 of 8) non-coding (NR_155545, exon 2 of 8) 530 NM_001362375 319945 Mm.258142 NM_177041 ENSMUSG00000042642 Flad1 A930017E24Rik|Pp591 flavin adenine dinucleotide synthetase 1 protein-coding unique_peak1_56_22_1.02643710071559_5.03678050641481_2.31341073667531 chr11 62006183 62006949 + 2.31341073667531 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 49803 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_56_22_1.02643710071559_5.03678050641481_2.31341073667531 chr1 75398485 75399075 + 2.31341073667531 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) -1305 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding unique_peak2_26_47_-1.10536067024775_5.03228216559728_2.31341073667531 chr5 77364347 77365171 + 2.31341073667531 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 43286 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_242_142_0.467291739003436_7.39351720628011_2.31304930122795 chr3 88620946 88622681 + 2.31304930122795 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 419 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_86_112_-0.664430338810467_6.48796379300995_2.31273107961856 chr19 6061290 6062147 + 2.31273107961856 NA exon (NM_013859, exon 1 of 1) exon (NM_013859, exon 1 of 1) 511 NM_013859 29805 Mm.2310 NM_013859 ENSMUSG00000075227 Znhit2 C11orf5|Fon|ORF6|Znhit2-ps zinc finger, HIT domain containing 2 protein-coding common_peak2_112_138_-0.588618371063256_6.82463188719188_2.31232075349501 chr1 93685698 93687341 + 2.31232075349501 NA exon (NM_016778, exon 2 of 5) exon (NM_016778, exon 2 of 5) 944 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak2_90_117_-0.662500804905843_6.55139264690892_2.31229383074526 chr8 36726399 36727376 + 2.31229383074526 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 6167 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_90_117_-0.662500804905843_6.55139264690892_2.31229383074526 chr8 36726467 36727319 + 2.31229383074526 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 6161 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-13 chr5 37960042 37960270 + 2.31132995230379 NA Intergenic B3|SINE|B2 66384 NR_153822 102637176 Mm.332343 NR_153822 Gm20052 Gm34055 predicted gene, 20052 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-15 chr12 86084876 86085071 + 2.31132995230379 NA intron (NM_029601, intron 1 of 7) intron (NM_029601, intron 1 of 7) 2412 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-66 chr8 95211660 95211872 + 2.31132995230379 NA Intergenic Intergenic -69226 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-12 chr4 135436552 135436757 + 2.31132995230379 NA Intergenic Intergenic -2849 NM_022980 53902 Mm.331970 NM_022980 ENSMUSG00000059713 Rcan3 AU041093|Csp3|Dscr1l2 regulator of calcineurin 3 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-27 chr17 84120036 84120268 + 2.31132995230379 NA Intergenic Intergenic 41492 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-7 chr2 71231584 71231834 + 2.31132995230379 NA intron (NM_010064, intron 4 of 15) intron (NM_010064, intron 4 of 15) 19763 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-46 chr4 43974393 43974610 + 2.31132995230379 NA intron (NM_027450, intron 4 of 4) B1_Mus2|SINE|Alu -9003 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-21 chr15 58508895 58509165 + 2.31132995230379 NA Intergenic Intergenic 93562 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-4 chr17 49691538 49691738 + 2.31132995230379 NA intron (NM_177052, intron 6 of 22) intron (NM_177052, intron 6 of 22) 76466 NM_177052 319991 Mm.441340 NM_177052 ENSMUSG00000023999 Kif6 D130004B10Rik|D130084M03Rik kinesin family member 6 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-33 chr2 90488971 90489283 + 2.31132995230379 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -9953 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-57 chr5 146734193 146734405 + 2.31132995230379 NA TTS (NM_011669) TTS (NM_011669) 60657 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-25 chr17 35997282 35997519 + 2.31132995230379 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 2896 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-16 chr13 28919078 28919272 + 2.31132995230379 NA Intergenic ID_B1|SINE|B4 -33753 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-40 chr3 69120685 69121052 + 2.31132995230379 NA intron (NM_008467, intron 1 of 16) B3|SINE|B2 6224 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-65 chr8 39766896 39767098 + 2.31132995230379 NA Intergenic Intergenic -124319 NM_001113326 20288 Mm.239291 NM_031195 ENSMUSG00000025044 Msr1 MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr macrophage scavenger receptor 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-36 chr2 170154623 170154845 + 2.31132995230379 NA Intergenic ID_B1|SINE|B4 -12059 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-47 chr4 48563917 48564174 + 2.31132995230379 NA Intergenic Intergenic -21129 NM_001356272 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-54 chr5 93024861 93025112 + 2.31132995230379 NA Intergenic Intergenic 20036 NM_175270 78088 Mm.245085 NM_175270 ENSMUSG00000045314 Sowahb 5730467H21Rik|Ankrd56 sosondowah ankyrin repeat domain family member B protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-43 chr3 108857031 108857283 + 2.31132995230379 NA intron (NM_001165965, intron 10 of 11) B1_Mur3|SINE|Alu -16655 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-5 chr1 192648536 192648727 + 2.31132995230379 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 122588 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-34 chr2 164131698 164131908 + 2.31132995230379 NA intron (NM_021420, intron 10 of 10) intron (NM_021420, intron 10 of 10) 39310 NM_008435 16538 Mm.6217 NM_008435 ENSMUSG00000040164 Kcns1 Kv9.1 K+ voltage-gated channel, subfamily S, 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-68 chr8 109733624 109733815 + 2.31132995230379 NA 5' UTR (NM_001080930, exon 4 of 4) 5' UTR (NM_001080930, exon 4 of 4) 4020 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-2 chr14 19751215 19751428 + 2.31132995230379 NA promoter-TSS (NM_008695) promoter-TSS (NM_008695) 64 NM_008695 18074 Mm.20348 NM_008695 ENSMUSG00000021806 Nid2 AW547149|Ly111|NID-2|entactin-2|nidogen-2 nidogen 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-29 chr19 31613700 31613915 + 2.31132995230379 NA intron (NM_001013833, intron 1 of 17) intron (NM_001013833, intron 1 of 17) 50563 NM_011160 19091 Mm.381170 NM_011160 ENSMUSG00000052920 Prkg1 AW125416|CGKI|Gm19690|Prkg1b|Prkgr1b protein kinase, cGMP-dependent, type I protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-3 chr1 150460422 150460714 + 2.31132995230379 NA intron (NM_021400, intron 4 of 12) intron (NM_021400, intron 4 of 12) 5597 NM_001110146 96875 Mm.174256 NM_021400 ENSMUSG00000006014 Prg4 CACP|DOL54|JCAP|MSF|SZP|lubricin proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-48 chr4 49232455 49232660 + 2.31132995230379 NA intron (NM_178756, intron 2 of 7) intron (NM_178756, intron 2 of 7) 173095 NM_178756 272031 Mm.299460 NM_178756 ENSMUSG00000063446 Plppr1 E130309F12Rik|Lppr1|PRG-3|mKIAA4247 phospholipid phosphatase related 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-24 chr17 14384390 14384651 + 2.31132995230379 NA intron (NM_022315, intron 9 of 12) intron (NM_022315, intron 9 of 12) 14422 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-64 chr7 114074204 114074401 + 2.31132995230379 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 43479 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-58 chr6 51567303 51567553 + 2.31132995230379 NA intron (NM_001361577, intron 2 of 6) intron (NM_001361577, intron 2 of 6) 22135 NM_001361577 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-30 chr2 26904771 26904983 + 2.31132995230379 NA TTS (NM_011513) TTS (NM_011513) -1990 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-8 chr11 3431546 3431780 + 2.31132995230379 NA intron (NR_110959, intron 1 of 5) intron (NR_110959, intron 1 of 5) -20774 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-44 chr3 152305927 152306122 + 2.31132995230379 NA intron (NM_001162375, intron 7 of 13) intron (NM_001162375, intron 7 of 13) 34383 NM_174868 215708 Mm.135018 NM_174868 ENSMUSG00000054942 Miga1 A930038D06|AI852168|C030011O14Rik|Fam73a|Mita1 mitoguardin 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-55 chr5 125084472 125084668 + 2.31132995230379 NA intron (NM_011424, intron 12 of 46) intron (NM_011424, intron 12 of 46) 81095 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-8 chr2 93331407 93331702 + 2.31132995230379 NA intron (NM_183180, intron 1 of 9) intron (NM_183180, intron 1 of 9) 2933 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-63 chr7 84562407 84562627 + 2.31132995230379 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 33563 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-71 chr9 77174650 77174846 + 2.31132995230379 NA intron (NM_027150, intron 5 of 7) intron (NM_027150, intron 5 of 7) -128967 NR_136923 26944 Mm.23199 NM_012033 ENSMUSG00000032357 Tinag AI452335|TIN-ag tubulointerstitial nephritis antigen protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-6 chr2 68976945 68977163 + 2.31132995230379 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 115613 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-52 chr4 150007684 150007909 + 2.31132995230379 NA intron (NM_173371, intron 1 of 4) PB1D10|SINE|Alu 1227 NM_173371 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-28 chr19 28616466 28616669 + 2.31132995230379 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -61657 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-38 chr3 41239936 41240138 + 2.31132995230379 NA Intergenic Intergenic -156991 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-3 chr16 24442569 24442779 + 2.31132995230379 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -5417 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-31 chr2 36243746 36244026 + 2.31132995230379 NA intron (NM_008969, intron 8 of 10) MIRc|SINE|MIR 13460 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-15 chr7 16009896 16010119 + 2.31132995230379 NA Intergenic Intergenic -10512 NM_001081418 243842 Mm.440249 NM_001081418 ENSMUSG00000070808 Bicra Gltscr1 BRD4 interacting chromatin remodeling complex associated protein protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-70 chr9 66631256 66631459 + 2.31132995230379 NA Intergenic Intergenic -38242 NM_001302116 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-10 chr11 103379203 103379412 + 2.31132995230379 NA intron (NM_183034, intron 6 of 11) intron (NM_183034, intron 6 of 11) -15615 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-62 chr7 65925752 65925981 + 2.31132995230379 NA intron (NM_011048, intron 2 of 21) intron (NM_011048, intron 2 of 21) 63730 NM_011048 18553 Mm.294007 NM_011048 ENSMUSG00000030513 Pcsk6 C86343|Pace4|SPC4|b2b2830Clo proprotein convertase subtilisin/kexin type 6 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-56 chr5 144903668 144903895 + 2.31132995230379 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) -6965 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-26 chr17 75795707 75795924 + 2.31132995230379 NA Intergenic Intergenic -65208 NR_033456 100043885 Mm.127562 NR_033456 Gm4710 - predicted gene 4710 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-14 chr12 73324832 73325036 + 2.31132995230379 NA intron (NM_001037717, intron 5 of 15) intron (NM_001037717, intron 5 of 15) 38086 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-35 chr2 168468129 168468348 + 2.31132995230379 NA Intergenic Intergenic 122127 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-53 chr5 36529509 36529736 + 2.31132995230379 NA intron (NM_133910, intron 3 of 13) intron (NM_133910, intron 3 of 13) 1001 NM_001113364 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-39 chr3 51333246 51333444 + 2.31132995230379 NA intron (NM_023502, intron 1 of 9) intron (NM_023502, intron 1 of 9) 7299 NM_001356358 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-11 chr12 24497635 24497966 + 2.31132995230379 NA promoter-TSS (NR_028341) promoter-TSS (NR_028341) -781 NM_020614 21340 Mm.39082 NM_020614 ENSMUSG00000059669 Taf1b 4930408G01Rik|A230108M10Rik|TAFI68|Tafi86|p63 TATA-box binding protein associated factor, RNA polymerase I, B protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-16 chr7 145252063 145252340 + 2.31132995230379 NA intron (NR_132644, intron 24 of 24) intron (NR_132644, intron 24 of 24) 31810 NR_132644 233979 Mm.102235 NM_146206 ENSMUSG00000048677 Tpcn2 D830047E22Rik|Gm35086 two pore segment channel 2 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379 chr12 82819276 82819554 + 2.31132995230379 NA intron (NM_001310478, intron 2 of 17) intron (NM_001310478, intron 2 of 17) 119740 NR_046045 74283 Mm.398247 NR_046045 ENSMUSG00000100890 1700085C21Rik - RIKEN cDNA 1700085C21 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-6 chr1 193565788 193566006 + 2.31132995230379 NA Intergenic Intergenic -58367 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-32 chr2 51268624 51268830 + 2.31132995230379 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 26896 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-19 chr14 21591473 21591800 + 2.31132995230379 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 91851 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-50 chr4 84621776 84622001 + 2.31132995230379 NA intron (NM_172870, intron 1 of 5) intron (NM_172870, intron 1 of 5) 53198 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-14 chr6 121010828 121011064 + 2.31132995230379 NA intron (NR_138097, intron 17 of 18) intron (NR_138097, intron 17 of 18) 52102 NR_138099 215458 Mm.122399 NR_138099 LOC215458 - uncharacterized LOC215458 ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-9 chr11 94915024 94915220 + 2.31132995230379 NA Intergenic Intergenic -21102 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-67 chr8 95360280 95360557 + 2.31132995230379 NA intron (NM_008609, intron 1 of 9) intron (NM_008609, intron 1 of 9) 8122 NM_008609 17388 Mm.217116 NM_008609 ENSMUSG00000031790 Mmp15 AI503551|MT-MMP 2|MT2-MMP matrix metallopeptidase 15 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-12 chr12 27304029 27304257 + 2.31132995230379 NA Intergenic Intergenic 38575 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-37 chr2 180043897 180044091 + 2.31132995230379 NA intron (NM_178750, intron 1 of 10) intron (NM_178750, intron 1 of 10) 1511 NM_178750 269397 Mm.63068 NM_178750 ENSMUSG00000039086 Ss18l1 A230053O16Rik|CREST SS18, nBAF chromatin remodeling complex subunit like 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-61 chr7 58744148 58744343 + 2.31132995230379 NA intron (NM_009728, intron 2 of 20) intron (NM_009728, intron 2 of 20) 86043 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-9 chr2 131993495 131993719 + 2.31132995230379 NA 3' UTR (NM_175445, exon 11 of 11) 3' UTR (NM_175445, exon 11 of 11) 36381 NM_175445 215653 Mm.204737 NM_175445 ENSMUSG00000027339 Rassf2 3830431H01Rik|9030412M04Rik|AI852669|AW495050 Ras association (RalGDS/AF-6) domain family member 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-4 chr1 158916312 158916552 + 2.31132995230379 NA intron (NM_001085376, intron 2 of 21) ID_B1|SINE|B4 41006 NM_001085376 23850 Mm.458621 NM_001085376 ENSMUSG00000073530 Pappa2 PAPP-A2|PLAC3|Pappe pappalysin 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-20 chr14 75849013 75849213 + 2.31132995230379 NA TTS (NM_009429) TTS (NM_009429) 1190 NR_028481 100303751 Mm.484707 NR_028481 ENSMUSG00000065147 Snora31 MBI-161 small nucleolar RNA, H/ACA box 31 snoRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-17 chr13 46227776 46228020 + 2.31132995230379 NA Intergenic Intergenic -45823 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-5 chr17 56302844 56303060 + 2.31132995230379 NA promoter-TSS (NM_010931) promoter-TSS (NM_010931) -385 NM_010931 18140 Mm.42196 NM_010931 ENSMUSG00000001228 Uhrf1 AL022808|ICBP90|Np95|RNF106 ubiquitin-like, containing PHD and RING finger domains, 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-72 chrX 112312204 112312425 + 2.31132995230379 NA intron (NM_001313734, intron 1 of 6) intron (NM_001313734, intron 1 of 6) 962 NM_026565 68117 Mm.161014 NM_026565 ENSMUSG00000025525 Apool 6720473G16Rik|9430083G14Rik|E130106L15Rik apolipoprotein O-like protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-51 chr4 139704988 139705195 + 2.31132995230379 NA Intergenic Intergenic 51553 NM_031873 83770 Mm.190612 NM_031873 ENSMUSG00000028738 Tas1r2 Gpr71|T1r2|TR2 taste receptor, type 1, member 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-41 chr3 96089333 96089600 + 2.31132995230379 NA Intergenic Intergenic -15061 NM_001025613 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-60 chr6 93784476 93784743 + 2.31132995230379 NA intron (NM_001029850, intron 5 of 23) intron (NM_001029850, intron 5 of 23) 128354 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-10 chr3 107832903 107833105 + 2.31132995230379 NA Intergenic Intergenic -44226 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-69 chr9 23697267 23697476 + 2.31132995230379 NA Intergenic Intergenic -400647 NM_175678 319239 Mm.130824 NM_175678 ENSMUSG00000043659 Npsr1 9330128H10Rik|GPRA|Gpr154|MVTR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-2 chr1 130657101 130657293 + 2.31132995230379 NA exon (NM_007576, exon 2 of 10) exon (NM_007576, exon 2 of 10) 4421 NM_007576 12269 Mm.306720 NM_007576 ENSMUSG00000026405 C4bp AI195242|C4bpa complement component 4 binding protein protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379 chr1 86914330 86914549 + 2.31132995230379 NA intron (NM_001172157, intron 10 of 21) intron (NM_001172157, intron 10 of 21) 175489 NM_007433 11650 Mm.195224 NM_007433 ENSMUSG00000026246 Alppl2 Akp5|C77216|D1Ertd816e|EAP alkaline phosphatase, placental-like 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-59 chr6 55336206 55336508 + 2.31132995230379 NA promoter-TSS (NM_007472) promoter-TSS (NM_007472) 58 NM_007472 11826 Mm.18625 NM_007472 ENSMUSG00000004655 Aqp1 CHIP28 aquaporin 1 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-23 chr16 4634375 4634589 + 2.31132995230379 NA intron (NM_030205, intron 13 of 27) intron (NM_030205, intron 13 of 27) -5463 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-42 chr3 108654752 108654969 + 2.31132995230379 NA intron (NM_001177771, intron 2 of 12) intron (NM_001177771, intron 2 of 12) 920 NM_001177770 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding unique_peak2_0_9_-3.56366813237659_1.54009402869907_2.31132995230379-11 chr4 107961740 107961984 + 2.31132995230379 NA Intergenic Intergenic -6472 NM_146255 242607 Mm.192040 NM_146255 ENSMUSG00000008932 Slc1a7 A930031E15Rik|Eaat5 solute carrier family 1 (glutamate transporter), member 7 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-13 chr12 35068019 35068208 + 2.31132995230379 NA intron (NM_001014973, intron 1 of 25) intron (NM_001014973, intron 1 of 25) 20924 NM_001014973 217463 Mm.213991 NM_001014973 ENSMUSG00000020590 Snx13 Rgs-px1|mKIAA0713 sorting nexin 13 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-7 chr10 80385015 80385226 + 2.31132995230379 NA intron (NM_198615, intron 1 of 1) intron (NM_198615, intron 1 of 1) 2531 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-22 chr15 69253552 69253799 + 2.31132995230379 NA Intergenic Intergenic -16858 NR_130983 75076 NR_130983 ENSMUSG00000116167 4930504C09Rik - RIKEN cDNA 4930504C09 gene ncRNA unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-49 chr4 62698589 62698837 + 2.31132995230379 NA intron (NM_134257, intron 12 of 15) intron (NM_134257, intron 12 of 15) 24739 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-45 chr4 33189131 33189358 + 2.31132995230379 NA exon (NM_001034867, exon 1 of 7) exon (NM_001034867, exon 1 of 7) 493 NM_001034867 242377 Mm.372465 NM_001034867 ENSMUSG00000054659 Pm20d2 Acy1l2|Gm424 peptidase M20 domain containing 2 protein-coding unique_peak1_10_1_2.19328536174355_2.09664268087177_2.31132995230379-18 chr13 63323847 63324041 + 2.31132995230379 NA non-coding (NR_110521, exon 6 of 6) non-coding (NR_110521, exon 6 of 6) -22661 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA common_peak1_189_106_0.533243407751391_7.00808869027684_2.31052138313253 chr11 97438061 97440568 + 2.31052138313253 NA Intergenic Intergenic -10846 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_212_121_0.507664026798055_7.18456935096191_2.30873922927227 chr5 115507416 115508964 + 2.30873922927227 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 1514 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak1_119_60_0.685685248489754_6.27357996180776_2.30518001265737 chr4 129820258 129821602 + 2.30518001265737 NA intron (NM_001164745, intron 1 of 5) intron (NM_001164745, intron 1 of 5) 222 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_72_98_-0.724941184513683_6.26688602782277_2.30518001265736 chr1 133694647 133695718 + 2.30518001265736 NA Intergenic Intergenic -5074 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding unique_peak1_45_16_1.15539046054592_4.6651580715233_2.30508312501225 chr5 3966631 3967665 + 2.30508312501225 NA intron (NM_194462, intron 7 of 47) intron (NM_194462, intron 7 of 47) 38962 NM_194462 100986 Mm.46044 NM_194462 ENSMUSG00000040407 Akap9 5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12 A kinase (PRKA) anchor protein (yotiao) 9 protein-coding unique_peak1_45_16_1.15539046054592_4.6651580715233_2.30508312501225-3 chr8 64727320 64727858 + 2.30508312501225 NA intron (NM_025436, intron 2 of 5) intron (NM_025436, intron 2 of 5) 5989 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding common_peak1_45_16_1.15539046054592_4.6651580715233_2.30508312501225 chr11 86347433 86348040 + 2.30508312501225 NA intron (NM_001080931, intron 2 of 29) intron (NM_001080931, intron 2 of 29) 9789 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding unique_peak2_18_38_-1.30918378474386_4.63081032649032_2.30508312501225 chr4 81618345 81618799 + 2.30508312501225 NA Intergenic Intergenic -131559 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA unique_peak1_45_16_1.15539046054592_4.6651580715233_2.30508312501225-2 chr5 21501512 21502210 + 2.30508312501225 NA intron (NM_001199632, intron 17 of 20) intron (NM_001199632, intron 17 of 20) -41666 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak2_106_133_-0.613923153428614_6.75912761374347_2.30470995083163 chr13 91807171 91807966 + 2.30470995083163 NA intron (NM_145453, intron 1 of 5) CpG 128 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak1_108_53_0.723807382964978_6.11679119364596_2.30467615779432 chr1 92799943 92800908 + 2.30467615779432 NA Intergenic Intergenic -31220 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_63_89_-0.775923011258367_6.10389159070049_2.30467615779432 chr15 58141002 58141907 + 2.30467615779432 NA promoter-TSS (NM_001326599) promoter-TSS (NM_001326599) 88 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_108_53_0.723807382964978_6.11679119364596_2.30467615779432-2 chr8 126805746 126806858 + 2.30467615779432 NA Intergenic Intergenic -42718 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_175_97_0.550355599335364_6.88988764378289_2.30420877568188 chr6 52228468 52230303 + 2.30420877568188 NA TTS (NR_029912) TTS (NR_029912) 780 NR_029912 723820 NR_029912 ENSMUSG00000065443 Mir196b Mirn196b|mir-196b microRNA 196b ncRNA unique_peak1_53_20_1.0802294281214_4.93243213683946_2.30394906186187 chr8 12803488 12804007 + 2.30394906186187 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 28172 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA common_peak1_23_44_-1.18097744988443_4.90136437138746_2.30394906186187 chr1 155056532 155056932 + 2.30394906186187 NA Intergenic B1_Mur1|SINE|Alu 26532 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_53_20_1.0802294281214_4.93243213683946_2.30394906186187-2 chr8 33798354 33798903 + 2.30394906186187 NA intron (NM_001286168, intron 5 of 7) intron (NM_001286168, intron 5 of 7) -50858 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding common_peak2_23_44_-1.18097744988443_4.90136437138746_2.30394906186187 chr1 136698899 136699212 + 2.30394906186187 NA intron (NR_037986, intron 1 of 4) intron (NR_037986, intron 1 of 4) 2844 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak1_52_20_1.0534526324911_4.91904373902431_2.30394906186187 chr9 65541891 65542244 + 2.30394906186187 NA Intergenic Intergenic 38020 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak2_23_44_-1.18097744988443_4.90136437138746_2.30394906186187 chr19 46478338 46478870 + 2.30394906186187 NA intron (NM_001025391, intron 10 of 11) intron (NM_001025391, intron 10 of 11) -23044 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_391_246_0.363825973061644_8.1302802181155_2.30239340602496 chr8 26977381 26979879 + 2.30239340602496 NA exon (NM_001101502, exon 2 of 2) exon (NM_001101502, exon 2 of 2) 1294 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak2_21_41_-1.20608704060846_4.78927390247453_2.30057427032103-2 chr8 106136419 106137172 + 2.30057427032103 NA 5' UTR (NM_176838, exon 1 of 15) 5' UTR (NM_176838, exon 1 of 15) 179 NM_176838 77411 Mm.183003 NM_176838 ENSMUSG00000084128 Esrp2 9530027K23Rik|Rbm35b epithelial splicing regulatory protein 2 protein-coding common_peak1_49_18_1.11437134870872_4.80511318779795_2.30057427032103 chr19 5568456 5568877 + 2.30057427032103 NA intron (NM_001362046, intron 2 of 2) intron (NM_001362046, intron 2 of 2) 642 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962|beta-5 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_21_41_-1.20608704060846_4.78927390247453_2.30057427032103 chr4 48042791 48043227 + 2.30057427032103 NA Intergenic CpG -2296 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_49_18_1.11437134870872_4.80511318779795_2.30057427032103-3 chr8 82631785 82632469 + 2.30057427032103 NA Intergenic Intergenic 141999 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding unique_peak1_49_18_1.11437134870872_4.80511318779795_2.30057427032103 chr1 89557149 89558203 + 2.30057427032103 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 102865 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_21_41_-1.20608704060846_4.78927390247453_2.30057427032103 chr15 57912189 57912800 + 2.30057427032103 NA intron (NM_001356310, intron 1 of 19) CpG 295 NM_001356310 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak1_49_18_1.11437134870872_4.80511318779795_2.30057427032103-2 chr6 120483030 120483530 + 2.30057427032103 NA 3' UTR (NM_008359, exon 13 of 13) 3' UTR (NM_008359, exon 13 of 13) 10527 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Tmem121b AW048664|Cecr6 transmembrane protein 121B protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-10 chr16 92962076 92962513 + 2.29727994934156 NA Intergenic Intergenic -136220 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-8 chr15 6707443 6707703 + 2.29727994934156 NA promoter-TSS (NM_030168) promoter-TSS (NM_030168) -808 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-16 chr3 52685453 52685814 + 2.29727994934156 NA Intergenic Intergenic -54091 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-5 chr11 54216389 54217022 + 2.29727994934156 NA Intergenic Intergenic -3417 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-13 chr2 30953361 30953836 + 2.29727994934156 NA intron (NM_133673, intron 1 of 4) intron (NM_133673, intron 1 of 4) 597 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-18 chr5 24475625 24476114 + 2.29727994934156 NA intron (NM_001359881, intron 1 of 15) intron (NM_001359881, intron 1 of 15) 23692 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-6 chr13 28680107 28680723 + 2.29727994934156 NA intron (NR_045054, intron 3 of 7) intron (NR_045054, intron 3 of 7) 30458 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-12 chr2 30392442 30392973 + 2.29727994934156 NA intron (NM_020329, intron 1 of 7) CpG 453 NM_001290508 57170 Mm.285167 NM_020329 ENSMUSG00000026856 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 protein-coding unique_peak2_9_25_-1.64368779559617_3.878595820343_2.29727994934156-2 chr11 86565762 86566404 + 2.29727994934156 NA intron (NM_001199046, intron 9 of 9) intron (NM_001199046, intron 9 of 9) 18075 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-20 chr7 28958693 28959014 + 2.29727994934156 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 3479 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-17 chr4 64132654 64133177 + 2.29727994934156 NA Intergenic Intergenic -85900 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-3 chr10 18507035 18507516 + 2.29727994934156 NA intron (NM_001163592, intron 3 of 7) intron (NM_001163592, intron 3 of 7) 37294 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding unique_peak2_9_25_-1.64368779559617_3.878595820343_2.29727994934156-3 chr3 31039376 31039683 + 2.29727994934156 NA TTS (NR_105975) TTS (NR_105975) 563 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-4 chr11 4102983 4103713 + 2.29727994934156 NA intron (NM_144520, intron 11 of 11) intron (NM_144520, intron 11 of 11) -7917 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-15 chr2 118520962 118521440 + 2.29727994934156 NA Intergenic Intergenic 23386 NR_138603 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156 chr1 36324377 36325001 + 2.29727994934156 NA TTS (NR_033310) TTS (NR_033310) 16956 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-14 chr2 60172990 60173600 + 2.29727994934156 NA Intergenic Intergenic -36641 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding unique_peak2_9_25_-1.64368779559617_3.878595820343_2.29727994934156 chr1 179668015 179668568 + 2.29727994934156 NA promoter-TSS (NM_178653) promoter-TSS (NM_178653) 60 NM_178653 109232 Mm.136458 NM_178653 ENSMUSG00000038936 Sccpdh AW214504|C330023F11Rik saccharopine dehydrogenase (putative) protein-coding unique_peak2_9_25_-1.64368779559617_3.878595820343_2.29727994934156-4 chr9 35016412 35016762 + 2.29727994934156 NA intron (NM_001190912, intron 9 of 15) intron (NM_001190912, intron 9 of 15) -100141 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-19 chr6 29430459 29430755 + 2.29727994934156 NA Intergenic Intergenic -2546 NM_001081185 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-9 chr16 92778861 92779262 + 2.29727994934156 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 47013 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156 chr12 102291111 102291392 + 2.29727994934156 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 7610 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-2 chr1 40175257 40175591 + 2.29727994934156 NA Intergenic Intergenic -49656 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-11 chr18 65671322 65671666 + 2.29727994934156 NA intron (NM_001361052, intron 6 of 8) intron (NM_001361052, intron 6 of 8) -26774 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_29_8_1.46060754375682_3.90022877332072_2.29727994934156-7 chr14 103345523 103345997 + 2.29727994934156 NA intron (NM_207215, intron 1 of 84) intron (NM_207215, intron 1 of 84) 1040 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak1_125_64_0.663947505645137_6.35434156585102_2.29714106950392 chr2 36135845 36136931 + 2.29714106950392 NA promoter-TSS (NM_026422) promoter-TSS (NM_026422) -10 NM_026422 67871 Mm.378232 NM_026422 ENSMUSG00000026887 Mrrf 2400002D02Rik|MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding common_peak1_130_156_-0.552558440449237_7.01834152866701_2.29505855809809 chr8 126614461 126615051 + 2.29505855809809 NA Intergenic Intergenic -21320 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_65_27_0.952656082766911_5.28368296344106_2.29325777800877 chr15 27326749 27327655 + 2.29325777800877 NA Intergenic Intergenic -139475 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_65_27_0.952656082766911_5.28368296344106_2.29325777800877-4 chr3 9003879 9004457 + 2.29325777800877 NA promoter-TSS (NM_001357072) promoter-TSS (NM_001357072) 36 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_65_27_0.952656082766911_5.28368296344106_2.29325777800877-3 chr2 30453003 30453650 + 2.29325777800877 NA Intergenic Intergenic 20873 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding unique_peak1_65_27_0.952656082766911_5.28368296344106_2.29325777800877 chr5 91726110 91726797 + 2.29325777800877 NA Intergenic Intergenic 40847 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA common_peak1_65_27_0.952656082766911_5.28368296344106_2.29325777800877-2 chr15 80761963 80763475 + 2.29325777800877 NA intron (NM_144812, intron 3 of 24) intron (NM_144812, intron 3 of 24) -35891 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_143_76_0.610814748831316_6.57219391511056_2.29122342347542 chr14 121246494 121247441 + 2.29122342347542 NA intron (NM_134082, intron 13 of 26) intron (NM_134082, intron 13 of 26) -1739 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_92_118_-0.643532621527707_6.57305145254409_2.2912234234754 chr10 105841062 105842062 + 2.2912234234754 NA promoter-TSS (NM_207522) promoter-TSS (NM_207522) 83 NM_025602 52713 Mm.339224 NM_025602 ENSMUSG00000019897 Ccdc59 2300004H16Rik|D10Ertd718e coiled-coil domain containing 59 protein-coding common_peak1_137_72_0.626809365570447_6.50322924166524_2.29061329562075 chr7 143691089 143692297 + 2.29061329562075 NA intron (NM_001199227, intron 21 of 21) intron (NM_001199227, intron 21 of 21) -5818 NR_131763 79201 Mm.290780 NM_024290 ENSMUSG00000037613 Tnfrsf23 SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB tumor necrosis factor receptor superfamily, member 23 protein-coding common_peak2_68_94_-0.746166704307239_6.19677225617733_2.28992531136026 chr8 36720577 36722003 + 2.28992531136026 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 11764 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_68_94_-0.746166704307239_6.19677225617733_2.28992531136026-2 chr9 79214623 79215816 + 2.28992531136026 NA Intergenic Intergenic 304083 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA common_peak1_114_57_0.697474225849317_6.20671810805223_2.28992531136025 chr8 95143099 95144830 + 2.28992531136025 NA Intergenic Intergenic -1424 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084 chr12 33302852 33303324 + 2.2880788707084 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 573 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084-2 chr13 23530637 23530907 + 2.2880788707084 NA promoter-TSS (NM_153173) promoter-TSS (NM_153173) -272 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding unique_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084-5 chr4 81927282 81927886 + 2.2880788707084 NA Intergenic Intergenic -137796 NR_040659 545641 Mm.216028 NR_040659 ENSMUSG00000085022 Gm5860 EG545641 predicted gene 5860 ncRNA unique_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084 chr1 89473746 89474526 + 2.2880788707084 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 19325 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084-6 chr17 46271837 46272409 + 2.2880788707084 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 10903 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding unique_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084-4 chr13 97138213 97138449 + 2.2880788707084 NA promoter-TSS (NM_021552) promoter-TSS (NM_021552) 394 NM_001271464 320806 Mm.219675 NM_177266 ENSMUSG00000021666 Gfm2 6530419G12Rik|A930009M04Rik|EF-G2mt|EFG2|MST027|RRF2mt G elongation factor, mitochondrial 2 protein-coding unique_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084-4 chr3 107807545 107808188 + 2.2880788707084 NA Intergenic Intergenic -47397 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084-2 chr6 108664765 108665259 + 2.2880788707084 NA exon (NM_011498, exon 5 of 5) exon (NM_011498, exon 5 of 5) -4078 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084-5 chr14 55015556 55015852 + 2.2880788707084 NA intron (NM_026890, intron 1 of 10) intron (NM_026890, intron 1 of 10) 250 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding common_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084 chr12 79514105 79514596 + 2.2880788707084 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 216999 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084-6 chr7 4684616 4685024 + 2.2880788707084 NA intron (NM_024172, intron 1 of 7) intron (NM_024172, intron 1 of 7) 161 NM_001360629 66245 Mm.6803 NM_024172 ENSMUSG00000063802 Hspbp1 1500019G21Rik HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 protein-coding unique_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084-2 chr10 78353255 78353689 + 2.2880788707084 NA Intergenic Intergenic -1772 NM_053014 28169 Mm.141230 NM_053014 ENSMUSG00000001211 Agpat3 AW061257|AW493985|D10Jhu12e|lpaat3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding unique_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084-3 chr13 37291091 37291785 + 2.2880788707084 NA Intergenic Intergenic -53907 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084-2 chr3 28735113 28735563 + 2.2880788707084 NA Intergenic Intergenic 37435 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding common_peak1_35_11_1.30674874795155_4.23833687469693_2.2880788707084 chr15 103370091 103370483 + 2.2880788707084 NA Intergenic Intergenic -3496 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding unique_peak2_12_30_-1.52160315635852_4.19339473220762_2.2880788707084-3 chr19 7303402 7303886 + 2.2880788707084 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -8197 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_108_134_-0.598120711922385_6.77775524108964_2.28648814127338 chr9 108648574 108649602 + 2.28648814127338 NA intron (NM_001357285, intron 1 of 15) CpG 320 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding common_peak2_42_65_-0.898151589149021_5.59531832478394_2.28577929610735 chr12 108836092 108836702 + 2.28577929610735 NA promoter-TSS (NM_181328) promoter-TSS (NM_181328) -521 NM_181328 214663 Mm.266264 NM_181328 ENSMUSG00000021265 Slc25a29 C030003J19Rik|CACL|mCACL solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 protein-coding common_peak2_42_65_-0.898151589149021_5.59531832478394_2.28577929610735-2 chr15 80022190 80022905 + 2.28577929610735 NA Intergenic Intergenic -7739 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding unique_peak1_78_35_0.847642664832964_5.59374633385879_2.28577929610734 chr3 138211595 138212792 + 2.28577929610734 NA intron (NR_045760, intron 2 of 2) intron (NR_045760, intron 2 of 2) -5580 NM_009626 11529 Mm.8473 NM_009626 ENSMUSG00000055301 Adh7 AI325182|Adh-3|Adh-3e|Adh-3t|Adh3|Adh3-e|Adh3-t|Adh4|Adt-1 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding common_peak1_221_128_0.486459128715154_7.25445681978083_2.28482667980979 chr10 127164564 127166723 + 2.28482667980979 NA promoter-TSS (NM_001244618) promoter-TSS (NM_001244618) -188 NM_027739 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak1_344_213_0.387768857229954_7.93535141501612_2.28439096260495 chr19 46500222 46502675 + 2.28439096260495 NA promoter-TSS (NM_053100) promoter-TSS (NM_053100) -200 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_190_214_-0.465962664642444_7.51521151726824_2.28347532657176 chr18 60499998 60502264 + 2.28347532657176 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 852 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak1_184_103_0.53606796252374_6.96847369940296_2.28263805875227 chr17 84115107 84117038 + 2.28263805875227 NA Intergenic Intergenic 37412 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_125_151_-0.561612194769994_6.96712141605859_2.28263805875227 chr1 167268471 167270062 + 2.28263805875227 NA intron (NM_030724, intron 1 of 6) B1_Mur1|SINE|Alu 15861 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_53_77_-0.812855367962089_5.8789745348812_2.28033326638858 chr4 156196429 156197458 + 2.28033326638858 NA intron (NM_021604, intron 1 of 35) CpG 545 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_52_77_-0.839632163592388_5.86558613706605_2.28033326638858 chr9 57428742 57429205 + 2.28033326638858 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 10763 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_73_99_-0.719950428290526_6.28388097562946_2.27963627776729 chr17 34951958 34952885 + 2.27963627776729 NA promoter-TSS (NR_027943) promoter-TSS (NR_027943) 47 NR_027943 68763 Mm.28895 NR_015536 ENSMUSG00000092203 1110038B12Rik 0610009C20Rik|0910001G04Rik RIKEN cDNA 1110038B12 gene ncRNA common_peak1_45_69_-0.886429715148711_5.68606815937061_2.27953925170198 chr13 100832963 100833404 + 2.27953925170198 NA 5' UTR (NM_022885, exon 1 of 16) 5' UTR (NM_022885, exon 1 of 16) 244 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 protein-coding common_peak1_171_94_0.562276962731996_6.85099408969695_2.27748158038708 chr8 47939023 47941364 + 2.27748158038708 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 50358 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_65_90_-0.747783635374182_6.13390282251161_2.27623938954082 chr4 32239535 32240350 + 2.27623938954082 NA Intergenic CpG -177493 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_109_54_0.710417608253034_6.13656851765118_2.27623938954082 chr13 45871319 45872158 + 2.27623938954082 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 93253 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_61_25_0.97000982141169_5.18544462884694_2.27205585058211 chr2 26297055 26297468 + 2.27205585058211 NA Intergenic Intergenic -2704 NM_177841 329366 Mm.77712 NM_177841 ENSMUSG00000048038 Ccdc187 4932418E24Rik coiled-coil domain containing 187 protein-coding unique_peak1_61_25_0.97000982141169_5.18544462884694_2.27205585058211 chr7 79920066 79921137 + 2.27205585058211 NA promoter-TSS (NM_009682) promoter-TSS (NM_009682) 39 NM_009682 11778 Mm.220173 NM_009682 ENSMUSG00000063801 Ap3s2 [s]3B adaptor-related protein complex 3, sigma 2 subunit protein-coding common_peak2_29_51_-1.06990717294196_5.16548613167011_2.27205585058211 chr2 5894511 5895387 + 2.27205585058211 NA intron (NM_021305, intron 1 of 11) intron (NM_021305, intron 1 of 11) 483 NM_021305 57743 Mm.21435 NM_021305 ENSMUSG00000025816 Sec61a2 - Sec61, alpha subunit 2 (S. cerevisiae) protein-coding common_peak1_157_182_-0.50518715158201_7.26310626249304_2.27194290170246 chr8 128661526 128663476 + 2.27194290170246 NA Intergenic ID_B1|SINE|B4 -23153 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_120_146_-0.57136158386004_6.91399155290634_2.27108947371414 chr6 127148655 127150058 + 2.27108947371414 NA promoter-TSS (NR_040274) promoter-TSS (NR_040274) -33 NR_040274 77558 Mm.358918 NR_040273 ENSMUSG00000097166 9330179D12Rik - RIKEN cDNA 9330179D12 gene ncRNA common_peak2_178_99_0.545421382561783_6.91656688105562_2.27108947371411 chr19 46501709 46502641 + 2.27108947371411 NA 5' UTR (NM_053100, exon 1 of 6) 5' UTR (NM_053100, exon 1 of 6) 527 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_93_119_-0.640284271879708_6.58674845966866_2.27059340392728 chr10 105841106 105842124 + 2.27059340392728 NA promoter-TSS (NM_207522) promoter-TSS (NM_207522) 136 NM_025602 52713 Mm.339224 NM_025602 ENSMUSG00000019897 Ccdc59 2300004H16Rik|D10Ertd718e coiled-coil domain containing 59 protein-coding common_peak2_70_30_0.910424431319856_5.4094085260468_2.2696557331197 chr1 156617372 156618026 + 2.2696557331197 NA intron (NM_001136104, intron 1 of 12) intron (NM_001136104, intron 1 of 12) 56640 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak1_70_30_0.910424431319856_5.4094085260468_2.2696557331197-2 chr6 147091505 147092175 + 2.2696557331197 NA exon (NM_001081237, exon 1 of 3) exon (NM_001081237, exon 1 of 3) 765 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding common_peak1_70_30_0.910424431319856_5.4094085260468_2.2696557331197 chr13 15660868 15661532 + 2.2696557331197 NA intron (NM_008130, intron 9 of 14) intron (NM_008130, intron 9 of 14) 141430 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak2_133_158_-0.538384917217212_7.04369049667575_2.26484006793207 chr16 24433730 24435210 + 2.26484006793207 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -13621 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_104_51_0.724696897058923_6.06278816667055_2.26436748914323 chr15 76246792 76247667 + 2.26436748914323 NA promoter-TSS (NR_105918) promoter-TSS (NR_105918) 422 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding common_peak1_158_86_0.576607182075343_6.7312470868864_2.26100141731837 chr4 150002241 150003959 + 2.26100141731837 NA 5' UTR (NM_001291004, exon 1 of 5) 5' UTR (NM_001291004, exon 1 of 5) 136 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_158_183_-0.504011278132942_7.27155631699054_2.25922620700916-2 chr2 84714411 84716781 + 2.25922620700916 NA promoter-TSS (NM_144887) promoter-TSS (NM_144887) -432 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak2_158_183_-0.504011278132942_7.27155631699054_2.25922620700916 chr12 80110249 80112834 + 2.25922620700916 NA intron (NM_007564, intron 1 of 1) intron (NM_007564, intron 1 of 1) 1472 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak2_75_100_-0.696103007779892_6.31015997886185_2.25474168621452 chr18 66327185 66328049 + 2.25474168621452 NA Intergenic Intergenic -35779 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_75_100_-0.696103007779892_6.31015997886185_2.25474168621452 chr18 66327181 66328076 + 2.25474168621452 NA Intergenic Intergenic -35790 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak2_74_100_-0.715077018372032_6.30067297356578_2.25474168621452 chr5 31613836 31614943 + 2.25474168621452 NA intron (NM_025796, intron 1 of 3) intron (NM_025796, intron 1 of 3) 438 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_75_100_-0.696103007779892_6.31015997886185_2.25474168621452-2 chr6 54201962 54203332 + 2.25474168621452 NA intron (NM_001163640, intron 3 of 12) intron (NM_001163640, intron 3 of 12) -62211 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_57_82_-0.800126409969658_5.9749762263621_2.25460892158572 chr18 61107643 61108951 + 2.25460892158572 NA intron (NM_001037859, intron 2 of 21) intron (NM_001037859, intron 2 of 21) 2725 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_39_62_-0.934637960101487_5.50996094344917_2.25438184616369 chr16 26400202 26401120 + 2.25438184616369 NA Intergenic Intergenic -28822 NM_016674 12737 Mm.289441 NM_016674 ENSMUSG00000022512 Cldn1 AI596271 claudin 1 protein-coding common_peak1_75_33_0.874645633721563_5.52478565811112_2.25438184616369 chr1 90603505 90604110 + 2.25438184616369 NA intron (NM_133805, intron 1 of 7) B1F1|SINE|Alu 382 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak2_57_23_0.989950520656111_5.07993776104921_2.25413655118513 chr3 38284226 38284736 + 2.25413655118513 NA Intergenic Intergenic -76362 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_27_48_-1.08301075032328_5.07320446895357_2.25413655118513 chr17 62879452 62880205 + 2.25413655118513 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 1489 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak1_57_23_0.989950520656111_5.07993776104921_2.25413655118513 chr3 159030522 159031185 + 2.25413655118513 NA Intergenic Intergenic -45511 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA unique_peak2_27_48_-1.08301075032328_5.07320446895357_2.25413655118513-2 chr18 4921575 4922317 + 2.25413655118513 NA Intergenic CpG 109460 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA common_peak1_58_23_1.01443858460152_5.09218179302192_2.25413655118513-4 chr7 34918034 34918865 + 2.25413655118513 NA intron (NM_008820, intron 1 of 14) intron (NM_008820, intron 1 of 14) 6042 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding unique_peak1_58_23_1.01443858460152_5.09218179302192_2.25413655118513 chr15 95183667 95184285 + 2.25413655118513 NA Intergenic Intergenic -34658 NR_015482 100043315 Mm.159041 NR_015482 ENSMUSG00000100603 LOC100043315 - uncharacterized LOC100043315 ncRNA common_peak1_58_23_1.01443858460152_5.09218179302192_2.25413655118513-2 chr5 64280529 64281421 + 2.25413655118513 NA intron (NM_001289514, intron 9 of 18) PB1D10|SINE|Alu 50618 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak2_27_48_-1.08301075032328_5.07320446895357_2.25413655118513 chr17 35813559 35814223 + 2.25413655118513 NA Intergenic Intergenic -7822 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak1_58_23_1.01443858460152_5.09218179302192_2.25413655118513 chr17 56256101 56256531 + 2.25413655118513 NA promoter-TSS (NM_010192) promoter-TSS (NM_010192) -477 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding common_peak1_57_23_0.989950520656111_5.07993776104921_2.25413655118513-2 chr6 91076500 91077372 + 2.25413655118513 NA intron (NM_018815, intron 6 of 39) intron (NM_018815, intron 6 of 39) 39890 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_58_23_1.01443858460152_5.09218179302192_2.25413655118513-3 chr5 129942254 129942805 + 2.25413655118513 NA intron (NM_001001327, intron 1 of 1) CpG 420 NM_027121 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding unique_peak2_15_33_-1.35742279703254_4.40875144273407_2.25377313481387 chr1 16106988 16107771 + 2.25377313481387 NA intron (NM_133832, intron 1 of 5) intron (NM_133832, intron 1 of 5) 1497 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_39_13_1.23528704134083_4.42499844272802_2.25377313481387-2 chr3 101075555 101076045 + 2.25377313481387 NA intron (NM_011197, intron 3 of 8) intron (NM_011197, intron 3 of 8) 34366 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak1_39_13_1.23528704134083_4.42499844272802_2.25377313481387-2 chr5 113219081 113219584 + 2.25377313481387 NA Intergenic Intergenic -7577 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak2_15_33_-1.35742279703254_4.40875144273407_2.25377313481387-2 chr13 28948372 28948909 + 2.25377313481387 NA TTS (NM_009238) TTS (NM_009238) 5059 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding unique_peak1_39_13_1.23528704134083_4.42499844272802_2.25377313481387 chr15 31332167 31332525 + 2.25377313481387 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 35413 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding unique_peak2_15_33_-1.35742279703254_4.40875144273407_2.25377313481387-4 chr9 61321766 61322528 + 2.25377313481387 NA Intergenic Intergenic -28338 NR_045334 622037 Mm.126243 NR_045334 ENSMUSG00000111658 B930092H01Rik - RIKEN cDNA B930092H01 gene ncRNA common_peak1_39_13_1.23528704134083_4.42499844272802_2.25377313481387 chr3 83845601 83846073 + 2.25377313481387 NA Intergenic Intergenic -4229 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak2_15_33_-1.35742279703254_4.40875144273407_2.25377313481387-3 chr4 47050408 47050781 + 2.25377313481387 NA intron (NM_001024136, intron 1 of 14) intron (NM_001024136, intron 1 of 14) 6712 NR_151464 75691 Mm.86866 NM_001024136 ENSMUSG00000066191 Anks6 2210417J20Rik|Ankrd14|Gm635|SamCystin|Samd6|b2b1801.1Clo ankyrin repeat and sterile alpha motif domain containing 6 protein-coding unique_peak1_39_13_1.23528704134083_4.42499844272802_2.25377313481387-3 chr6 88929590 88930002 + 2.25377313481387 NA Intergenic Intergenic 27545 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-17 chr9 22665649 22666218 + 2.25371873249798 NA intron (NM_001360259, intron 17 of 22) intron (NM_001360259, intron 17 of 22) 190218 NM_181316 319845 Mm.176725 NM_178415 ENSMUSG00000035919 Bbs9 E130103I17Rik Bardet-Biedl syndrome 9 (human) protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-7 chr13 33821937 33822319 + 2.25371873249798 NA Intergenic Intergenic 21280 NM_001045535 435350 Mm.263418 NM_001045535 ENSMUSG00000069248 Serpinb6e Gm11396|SPI3B|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6e protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-11 chr2 155821179 155821434 + 2.25371873249798 NA intron (NM_010579, intron 5 of 5) intron (NM_010579, intron 5 of 5) -2103 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-16 chr8 128466768 128467123 + 2.25371873249798 NA intron (NM_001358959, intron 8 of 16) intron (NM_001358959, intron 8 of 16) 107704 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-10 chr18 80646652 80646896 + 2.25371873249798 NA TTS (NM_016791) TTS (NM_016791) 61399 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-6 chr12 33186819 33187110 + 2.25371873249798 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 39278 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-2 chr10 7183446 7183836 + 2.25371873249798 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 28596 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-13 chr4 114589985 114590482 + 2.25371873249798 NA intron (NM_001085549, intron 4 of 6) intron (NM_001085549, intron 4 of 6) 183509 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-18 chr9 41229122 41229433 + 2.25371873249798 NA Intergenic Intergenic 23122 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-9 chr14 69812393 69812761 + 2.25371873249798 NA Intergenic Intergenic -7032 NM_153514 246710 Mm.102367 NM_153514 ENSMUSG00000022075 Rhobtb2 Dbc2|E130206H14Rik|mKIAA0717 Rho-related BTB domain containing 2 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-12 chr3 98335268 98335506 + 2.25371873249798 NA intron (NM_016966, intron 1 of 11) intron (NM_016966, intron 1 of 11) 4582 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-4 chr11 54109554 54110062 + 2.25371873249798 NA intron (NM_001136076, intron 2 of 15) PB1D10|SINE|Alu 8884 NM_011031 18452 Mm.3705 NM_011031 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798 chr1 134075077 134075462 + 2.25371873249798 NA 3' UTR (NM_007570, exon 2 of 2) 3' UTR (NM_007570, exon 2 of 2) 3886 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-3 chr10 78701883 78702412 + 2.25371873249798 NA Intergenic RSINE1|SINE|B4 16146 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-14 chr6 34869226 34869675 + 2.25371873249798 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 6304 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-15 chr6 98950298 98950579 + 2.25371873249798 NA intron (NM_001197321, intron 11 of 17) intron (NM_001197321, intron 11 of 17) 77860 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-5 chr11 68601050 68601473 + 2.25371873249798 NA Intergenic Intergenic 14224 NM_177779 276920 Mm.123046 NM_177779 ENSMUSG00000045915 Ccdc42 A530001H01Rik coiled-coil domain containing 42 protein-coding unique_peak1_27_7_1.53169909379193_3.76584954689596_2.25371873249798-8 chr14 45480321 45480594 + 2.25371873249798 NA intron (NM_001360525, intron 4 of 15) intron (NM_001360525, intron 4 of 15) 49608 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-5 chr12 72536451 72536722 + 2.25371873249797 NA intron (NM_026327, intron 1 of 10) intron (NM_026327, intron 1 of 10) 229 NM_026327 67708 Mm.11233 NM_026327 ENSMUSG00000034501 Pcnx4 1810048J11Rik|4932413O10|AU017192|Pcnxl4 pecanex homolog 4 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-10 chr17 12118904 12119197 + 2.25371873249797 NA promoter-TSS (NM_026644) promoter-TSS (NM_026644) -234 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-7 chr14 11610690 11611153 + 2.25371873249797 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 57368 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding unique_peak2_7_23_-1.84786747693012_3.6610287622561_2.25371873249797-2 chr2 157071925 157072328 + 2.25371873249797 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 7139 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-14 chr8 115334641 115334950 + 2.25371873249797 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 372099 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-4 chr12 34223966 34224399 + 2.25371873249797 NA intron (NM_001271386, intron 19 of 27) intron (NM_001271386, intron 19 of 27) 266511 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-13 chr7 99859132 99859482 + 2.25371873249797 NA promoter-TSS (NM_025668) promoter-TSS (NM_025668) 89 NM_001164258 446101 Mm.440757 NM_001164258 ENSMUSG00000035211 Xrra1 AI449753 X-ray radiation resistance associated 1 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-9 chr16 92235286 92235617 + 2.25371873249797 NA Intergenic Intergenic -56938 NM_134110 246133 Mm.156736 NM_134110 ENSMUSG00000039672 Kcne2 2200002I16Rik|AW048273|MiRP1 potassium voltage-gated channel, Isk-related subfamily, gene 2 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-3 chr11 96319773 96320130 + 2.25371873249797 NA intron (NM_010459, intron 1 of 1) intron (NM_010459, intron 1 of 1) 1684 NM_010459 15412 Mm.3546 NM_010459 ENSMUSG00000038692 Hoxb4 Hox-2.6 homeobox B4 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-12 chr6 108688797 108689210 + 2.25371873249797 NA Intergenic Intergenic -28069 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-6 chr12 85825285 85825676 + 2.25371873249797 NA promoter-TSS (NM_001360451) promoter-TSS (NM_001360451) 530 NM_001081423 320244 Mm.132172 NM_177114 ENSMUSG00000012609 Ttll5 1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998 tubulin tyrosine ligase-like family, member 5 protein-coding unique_peak2_7_23_-1.84786747693012_3.6610287622561_2.25371873249797-3 chr3 86020817 86021178 + 2.25371873249797 NA Intergenic Intergenic -18506 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-2 chr11 31478333 31478693 + 2.25371873249797 NA Intergenic Intergenic -108452 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-11 chr19 59888534 59888881 + 2.25371873249797 NA Intergenic Intergenic 54657 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797 chr1 45599513 45599944 + 2.25371873249797 NA Intergenic Intergenic -96446 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding unique_peak2_7_23_-1.84786747693012_3.6610287622561_2.25371873249797 chr12 31837513 31838072 + 2.25371873249797 NA intron (NM_001163126, intron 13 of 22) intron (NM_001163126, intron 13 of 22) 112453 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak2_8_23_-1.67914129290196_3.74539185427017_2.25371873249797-8 chr16 34860291 34860855 + 2.25371873249797 NA exon (NM_139300, exon 3 of 32) exon (NM_139300, exon 3 of 32) 75623 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak2_127_66_0.642785915040291_6.38748214797792_2.24960052525325 chr3 81030652 81031532 + 2.24960052525325 NA Intergenic Intergenic -5324 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_79_105_-0.692333470738013_6.38175371919419_2.24960052525323 chr11 98682607 98683470 + 2.24960052525323 NA intron (NM_009439, intron 1 of 11) intron (NM_009439, intron 1 of 11) 484 NM_009439 22123 Mm.12194 NM_009439 ENSMUSG00000017221 Psmd3 AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding common_peak1_79_105_-0.692333470738013_6.38175371919419_2.24960052525323 chr9 6668357 6669379 + 2.24960052525323 NA Intergenic Intergenic -402321 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_110_55_0.697386441654049_6.15604814288463_2.24860704148035 chr17 56035464 56036567 + 2.24860704148035 NA intron (NM_001357649, intron 1 of 10) intron (NM_001357649, intron 1 of 10) 622 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak1_89_115_-0.653667827274233_6.53114708149046_2.24781708817086 chr9 101074111 101075247 + 2.24781708817086 NA promoter-TSS (NM_001100451) promoter-TSS (NM_001100451) -83 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 MSL complex subunit 2 protein-coding common_peak1_134_70_0.635401650576112_6.46744794479274_2.24743646498824 chr18 52528660 52529705 + 2.24743646498824 NA exon (NM_010728, exon 1 of 7) exon (NM_010728, exon 1 of 7) 539 NM_001286181 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak1_54_78_-0.804948446826164_5.90130652476402_2.24733288503568 chr15 11904981 11905608 + 2.24733288503568 NA exon (NM_008728, exon 1 of 8) exon (NM_008728, exon 1 of 8) 380 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_54_78_-0.804948446826164_5.90130652476402_2.24733288503568 chr11 57518227 57519073 + 2.24733288503568 NA promoter-TSS (NM_001168668) promoter-TSS (NM_001168668) -6 NM_026342 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak1_94_45_0.758203417668768_5.9026636648914_2.24733288503567 chr15 66889046 66889842 + 2.24733288503567 NA Intergenic Intergenic -1949 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_94_45_0.758203417668768_5.9026636648914_2.24733288503567-2 chr3 137623587 137624531 + 2.24733288503567 NA intron (NM_030143, intron 1 of 2) intron (NM_030143, intron 1 of 2) 387 NM_030143 73284 Mm.250841 NM_030143 ENSMUSG00000046818 Ddit4l 1700037B15Rik|1700108M02Rik|REDD2|RTP801L|Smhs1 DNA-damage-inducible transcript 4-like protein-coding common_peak1_80_36_0.843929087498664_5.63141790937828_2.24566180706015 chr15 62323670 62324682 + 2.24566180706015 NA Intergenic B4A|SINE|B4 -104725 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_80_36_0.843929087498664_5.63141790937828_2.24566180706015-2 chr3 51408478 51408965 + 2.24566180706015 NA intron (NM_025523, intron 1 of 3) intron (NM_025523, intron 1 of 3) 234 NM_025523 66377 Mm.331007 NM_025523 ENSMUSG00000037152 Ndufc1 2310016K22Rik|KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein-coding unique_peak1_66_28_0.923572022512816_5.31976700638398_2.24341076832583 chr3 19188266 19188855 + 2.24341076832583 NA 5' UTR (NM_001356295, exon 1 of 8) 5' UTR (NM_001356295, exon 1 of 8) 265 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding common_peak2_33_55_-0.997524064721152_5.30859288969703_2.24341076832583 chr15 77835043 77835988 + 2.24341076832583 NA intron (NM_022410, intron 1 of 40) PB1D9|SINE|Alu 6660 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_84_39_0.800504681629723_5.72218043570222_2.24219372254142 chr1 132322465 132323283 + 2.24219372254142 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 6749 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_46_70_-0.876085816202628_5.71170421140337_2.24219372254142 chr2 117666034 117666531 + 2.24219372254142 NA Intergenic Intergenic 146520 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_84_39_0.800504681629723_5.72218043570222_2.24219372254142-2 chr2 119208070 119208860 + 2.24219372254142 NA promoter-TSS (NM_001164827) promoter-TSS (NM_001164827) -255 NM_001164827 72008 Mm.386807 NM_028054 ENSMUSG00000068580 Zfyve19 1500041L05Rik|ANCHR zinc finger, FYVE domain containing 19 protein-coding common_peak2_84_39_0.800504681629723_5.72218043570222_2.24219372254142 chr3 122078531 122079450 + 2.24219372254142 NA intron (NM_007378, intron 6 of 49) intron (NM_007378, intron 6 of 49) 34530 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_85_39_0.817259455748826_5.73055782276178_2.24219372254142 chr1 162206568 162207720 + 2.24219372254142 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -10479 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_85_39_0.817259455748826_5.73055782276178_2.24219372254142-2 chr11 60107597 60108618 + 2.24219372254142 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 3094 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_54_21_1.03940068271364_4.97913195999412_2.24027827302618 chr11 117255676 117256216 + 2.24027827302618 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -10300 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_54_21_1.03940068271364_4.97913195999412_2.24027827302618-4 chr8 61607102 61607531 + 2.24027827302618 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -16147 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_54_21_1.03940068271364_4.97913195999412_2.24027827302618-2 chr15 85705453 85706085 + 2.24027827302618 NA promoter-TSS (NR_029729) promoter-TSS (NR_029729) -834 NR_029729 723966 NR_029729 ENSMUSG00000065608 Mirlet7c-2 Mirnlet7c-2|let-7c-2 microRNA let7c-2 ncRNA common_peak1_54_21_1.03940068271364_4.97913195999412_2.24027827302618-3 chr6 88964807 88965388 + 2.24027827302618 NA Intergenic Intergenic 62846 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_54_21_1.03940068271364_4.97913195999412_2.24027827302618-2 chr11 74521518 74522218 + 2.24027827302618 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 68290 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_54_21_1.03940068271364_4.97913195999412_2.24027827302618 chr11 88286456 88287348 + 2.24027827302618 NA Intergenic Intergenic -7141 NM_028859 74297 Mm.207320 NM_028859 ENSMUSG00000034031 Ccdc182 1700106J16Rik coiled-coil domain containing 182 protein-coding common_peak2_25_45_-1.0980237816019_4.97455006525606_2.24027827302618 chr1 91443792 91444578 + 2.24027827302618 NA intron (NM_011066, intron 6 of 22) intron (NM_011066, intron 6 of 22) 15143 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak2_54_21_1.03940068271364_4.97913195999412_2.24027827302618-3 chr4 117835698 117836242 + 2.24027827302618 NA intron (NM_008135, intron 1 of 13) CpG 712 NM_008135 14664 Mm.244549 NM_008135 ENSMUSG00000028542 Slc6a9 Glyt-1|Glyt1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding common_peak1_54_21_1.03940068271364_4.97913195999412_2.24027827302618 chr10 80987730 80988077 + 2.24027827302618 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 13462 NM_001038655 14708 Mm.222496 NM_010319 ENSMUSG00000048240 Gng7 AI840417 guanine nucleotide binding protein (G protein), gamma 7 protein-coding common_peak2_123_148_-0.555773960482624_6.94128154022085_2.23905411965753 chr8 70632950 70634020 + 2.23905411965753 NA Intergenic Intergenic -1029 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_260_278_-0.394592065570254_7.92682527904406_2.23730443916367 chr13 58401143 58403336 + 2.23730443916367 NA promoter-TSS (NM_001301343) promoter-TSS (NM_001301343) -9 NR_031761 74386 Mm.85289 NM_028904 ENSMUSG00000035367 Rmi1 4932432N11Rik|C79893 RecQ mediated genome instability 1 protein-coding common_peak2_100_126_-0.619186787514752_6.67909129301479_2.23589564425284 chr4 125124362 125125900 + 2.23589564425284 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 2750 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_101_126_-0.605073206781504_6.68614808338141_2.23589564425284 chr6 124711743 124713345 + 2.23589564425284 NA promoter-TSS (NM_013536) promoter-TSS (NM_013536) 255 NM_007531 12034 Mm.36241 NM_007531 ENSMUSG00000004264 Phb2 AU044498|BAP|Bap37|Bcap37|REA prohibitin 2 protein-coding common_peak1_43_15_1.17917540259706_4.58958770129853_2.23573970698983 chr5 38445837 38446371 + 2.23573970698983 NA intron (NM_145559, intron 4 of 10) intron (NM_145559, intron 4 of 10) 34202 NM_001102414 117591 Mm.260137 NM_145559 ENSMUSG00000005107 Slc2a9 Glut9|SLC2A9B|SLC2a9A solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding common_peak1_43_15_1.17917540259706_4.58958770129853_2.23573970698983-2 chr5 100518488 100519004 + 2.23573970698983 NA intron (NM_001359203, intron 1 of 8) CpG 437 NM_001359204 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e|SGN4 COP9 signalosome subunit 4 protein-coding common_peak2_43_15_1.17917540259706_4.58958770129853_2.23573970698983 chr14 67072096 67072340 + 2.23573970698983 NA 5' UTR (NM_001205188, exon 1 of 10) 5' UTR (NM_001205188, exon 1 of 10) 253 NM_001360034 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding unique_peak1_43_15_1.17917540259706_4.58958770129853_2.23573970698983-2 chr6 72510322 72511023 + 2.23573970698983 NA Intergenic Intergenic -33719 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak1_43_15_1.17917540259706_4.58958770129853_2.23573970698983 chr5 30072960 30073481 + 2.23573970698983 NA intron (NM_021288, intron 1 of 6) intron (NM_021288, intron 1 of 6) 405 NR_033402 22171 Mm.268395 NM_021288 ENSMUSG00000025747 Tyms Ts thymidylate synthase protein-coding common_peak2_43_15_1.17917540259706_4.58958770129853_2.23573970698983-2 chr14 70576691 70577054 + 2.23573970698983 NA promoter-TSS (NM_001360475) promoter-TSS (NM_001360475) -952 NM_153136 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding common_peak2_17_36_-1.310687137383_4.55410979693745_2.23573970698982 chr5 31577002 31577399 + 2.23573970698982 NA Intergenic Intergenic -5803 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak2_17_36_-1.310687137383_4.55410979693745_2.23573970698982-2 chr7 134001067 134001479 + 2.23573970698982 NA intron (NM_007400, intron 4 of 22) intron (NM_007400, intron 4 of 22) -218488 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_62_87_-0.766061320390463_6.07640095844207_2.23549100446751 chr10 99241462 99241964 + 2.23549100446751 NA Intergenic Intergenic -21518 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_105_52_0.710794621133418_6.08331776512991_2.2354910044675 chr2 85048370 85049373 + 2.2354910044675 NA Intergenic Intergenic -1589 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-28 chr18 36409615 36409915 + 2.23384849113406 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 44730 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406 chr1 132416956 132417257 + 2.23384849113406 NA promoter-TSS (NM_172516) promoter-TSS (NM_172516) -347 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-19 chr3 84155373 84155626 + 2.23384849113406 NA intron (NM_029797, intron 1 of 7) CpG 287 NM_029797 76915 Mm.274829 NM_029797 ENSMUSG00000033752 Mnd1 2610034E18Rik|AI591601|Gaj meiotic nuclear divisions 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-54 chr5 30287263 30287529 + 2.23384849113406 NA Intergenic Intergenic -54267 NM_001033460 381738 Mm.389604 NM_001033460 ENSMUSG00000073102 Drc1 Ccdc164|Gm1060|b2b1654Clo dynein regulatory complex subunit 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-20 chr3 138488338 138488597 + 2.23384849113406 NA intron (NM_175224, intron 1 of 10) intron (NM_175224, intron 1 of 10) 915 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-4 chr13 99056001 99056240 + 2.23384849113406 NA Intergenic Intergenic 31801 NR_045495 69603 Mm.390632 NR_045495 ENSMUSG00000100410 2310020H05Rik - RIKEN cDNA 2310020H05 gene ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-30 chr18 42621925 42622310 + 2.23384849113406 NA Intergenic Intergenic -42465 NM_181543 240239 Mm.186779 NM_181543 ENSMUSG00000042816 Gpr151 C130082O03Rik|GalRL|PGR7|nGPCR-2037 G protein-coupled receptor 151 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-18 chr3 57428946 57429162 + 2.23384849113406 NA intron (NM_145539, intron 2 of 4) intron (NM_145539, intron 2 of 4) 3644 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-43 chr3 96555291 96555617 + 2.23384849113406 NA TTS (NR_040409) TTS (NR_040409) -2503 NM_023719 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-24 chr15 73240780 73241042 + 2.23384849113406 NA intron (NM_001358046, intron 25 of 34) intron (NM_001358046, intron 25 of 34) 13971 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-8 chr11 72454857 72455105 + 2.23384849113406 NA intron (NM_153060, intron 9 of 12) intron (NM_153060, intron 9 of 12) 13654 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-30 chr9 56415290 56415609 + 2.23384849113406 NA intron (NM_172924, intron 1 of 6) intron (NM_172924, intron 1 of 6) 2601 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-35 chr2 32925986 32926295 + 2.23384849113406 NA TTS (NM_146119) TTS (NM_146119) 35115 NM_199302 227738 Mm.248037 NM_199302 ENSMUSG00000026792 Lrsam1 - leucine rich repeat and sterile alpha motif containing 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-7 chr16 10541433 10541747 + 2.23384849113406 NA intron (NM_021428, intron 1 of 1) intron (NM_021428, intron 1 of 1) 1464 NM_021428 58239 Mm.353006 NM_021428 ENSMUSG00000038055 Dexi 1810029J14Rik|AI836170|AW413143|D16Bwg0586e|Myle dexamethasone-induced transcript protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-31 chrX 164979816 164980078 + 2.23384849113406 NA promoter-TSS (NM_175027) promoter-TSS (NM_175027) 428 NM_001290523 76763 Mm.291758 NM_029730 ENSMUSG00000061778 Mospd2 2410013I23Rik motile sperm domain containing 2 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-25 chr16 24436420 24436613 + 2.23384849113406 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -11575 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-62 chr7 114115124 114115345 + 2.23384849113406 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 2547 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-24 chr7 66652504 66652744 + 2.23384849113406 NA intron (NM_080443, intron 5 of 5) intron (NM_080443, intron 5 of 5) 36937 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-70 chrX 19164349 19164585 + 2.23384849113406 NA Intergenic Intergenic -17496 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-60 chr6 93622449 93622684 + 2.23384849113406 NA Intergenic Intergenic 290397 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-11 chr12 8519041 8519271 + 2.23384849113406 NA Intergenic Intergenic -19147 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-4 chr11 4181945 4182155 + 2.23384849113406 NA 3' UTR (NM_026175, exon 16 of 16) 3' UTR (NM_026175, exon 16 of 16) -4783 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-38 chr3 27446862 27447099 + 2.23384849113406 NA intron (NM_001356953, intron 23 of 26) intron (NM_001356953, intron 23 of 26) 75629 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|GHRP|GHS-R|Ghsr1a growth hormone secretagogue receptor protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-61 chr7 101473123 101473319 + 2.23384849113406 NA intron (NR_152192, intron 3 of 31) intron (NR_152192, intron 3 of 31) -2155 NR_029791 387157 NR_029791 ENSMUSG00000065446 Mir139 Mirn139|mir-139|mmu-mir-139 microRNA 139 ncRNA unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-17 chr3 27575177 27575660 + 2.23384849113406 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) 9577 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-58 chr6 70840106 70840490 + 2.23384849113406 NA Intergenic Intergenic -4217 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-16 chr13 3745126 3745314 + 2.23384849113406 NA Intergenic Intergenic 59098 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-33 chr18 82967271 82967672 + 2.23384849113406 NA intron (NM_183033, intron 2 of 5) intron (NM_183033, intron 2 of 5) -46911 NR_033307 75853 Mm.420737 NR_033307 4930592I03Rik - RIKEN cDNA 4930592I03 gene ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-37 chr3 21822940 21823330 + 2.23384849113406 NA Intergenic Intergenic -253517 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-68 chr9 66669133 66669414 + 2.23384849113406 NA Intergenic Intergenic -44413 NM_178396 76459 Mm.277921 NM_178396 ENSMUSG00000032373 Car12 2310047E01Rik|AI314958|CA-XII|Ca12 carbonic anhydrase 12 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-14 chr12 73146942 73147196 + 2.23384849113406 NA intron (NM_008612, intron 1 of 7) intron (NM_008612, intron 1 of 7) 23352 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-10 chr11 98750648 98750951 + 2.23384849113406 NA intron (NM_178060, intron 1 of 8) intron (NM_178060, intron 1 of 8) 9014 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-65 chr8 105482071 105482290 + 2.23384849113406 NA intron (NM_175160, intron 5 of 13) intron (NM_175160, intron 5 of 13) 2247 NM_001357252 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-5 chr11 54065786 54066067 + 2.23384849113406 NA intron (NM_019417, intron 1 of 6) intron (NM_019417, intron 1 of 6) 3091 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-32 chr18 66290306 66290551 + 2.23384849113406 NA intron (NM_178793, intron 2 of 10) intron (NM_178793, intron 2 of 10) 1410 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-16 chr2 117956033 117956263 + 2.23384849113406 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 134220 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-55 chr5 123914170 123914592 + 2.23384849113406 NA intron (NM_026603, intron 2 of 7) B3A|SINE|B2 7106 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-2 chr11 117247398 117247779 + 2.23384849113406 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -18658 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-6 chr11 59421403 59421774 + 2.23384849113406 NA exon (NM_001356452, exon 4 of 5) exon (NM_001356452, exon 4 of 5) 28446 NM_001356454 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding unique_peak2_16_4_1.49495774202233_3.06940696589853_2.23384849113406 chr3 52678417 52678626 + 2.23384849113406 NA Intergenic Intergenic -61203 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-5 chr15 38391359 38391564 + 2.23384849113406 NA Intergenic Intergenic -90750 NM_001289471 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-11 chr18 42978856 42979185 + 2.23384849113406 NA intron (NM_028392, intron 1 of 8) intron (NM_028392, intron 1 of 8) -79514 NR_073583 72930 Mm.26134 NM_027531 ENSMUSG00000024500 Ppp2r2b 2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-56 chr5 134620531 134620849 + 2.23384849113406 NA 3' UTR (NM_001312867, exon 6 of 6) 3' UTR (NM_001312867, exon 6 of 6) -5665 NM_020044 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-29 chr8 126583640 126583911 + 2.23384849113406 NA Intergenic Intergenic 9661 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-19 chr14 25768026 25768229 + 2.23384849113406 NA intron (NM_001101433, intron 1 of 3) intron (NM_001101433, intron 1 of 3) 729 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-59 chr6 86904806 86905119 + 2.23384849113406 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 55445 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-8 chr16 14362499 14362783 + 2.23384849113406 NA intron (NM_008576, intron 1 of 30) intron (NM_008576, intron 1 of 30) 1083 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-49 chr3 143509541 143509739 + 2.23384849113406 NA Intergenic Intergenic 202503 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-26 chr17 6601785 6602008 + 2.23384849113406 NA intron (NM_001166630, intron 1 of 4) CpG 117 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-15 chr2 93333038 93333245 + 2.23384849113406 NA intron (NM_183180, intron 1 of 9) intron (NM_183180, intron 1 of 9) 1346 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-42 chr3 89269914 89270155 + 2.23384849113406 NA intron (NM_009057, intron 2 of 5) intron (NM_009057, intron 2 of 5) 536 NM_009057 19729 Mm.17958 NM_009057 ENSMUSG00000027953 Slc50a1 MmSWEET1|Rag1ap1|Rga solute carrier family 50 (sugar transporter), member 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-21 chr14 121038277 121038481 + 2.23384849113406 NA intron (NM_134082, intron 1 of 26) intron (NM_134082, intron 1 of 26) 2805 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-12 chr12 10136171 10136591 + 2.23384849113406 NA Intergenic Intergenic -233590 NM_027588 70881 Mm.272843 NM_027588 ENSMUSG00000020622 Nt5c1b 4921514H13Rik|AIRP|CN-IB|cN1B 5'-nucleotidase, cytosolic IB protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-63 chr8 22481819 22482106 + 2.23384849113406 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -5083 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-50 chr4 6366763 6366976 + 2.23384849113406 NA intron (NM_001098227, intron 1 of 8) intron (NM_001098227, intron 1 of 8) 1189 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-72 chrX 169356355 169356661 + 2.23384849113406 NA intron (NM_001361166, intron 4 of 5) intron (NM_001361166, intron 4 of 5) 36113 NM_001361166 101055907 NM_001361166 Gm15246 - predicted gene 15246 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-57 chr6 4732730 4733075 + 2.23384849113406 NA intron (NM_001130188, intron 1 of 11) intron (NM_001130188, intron 1 of 11) 14302 NM_001130188 20392 Mm.8739 NM_011360 ENSMUSG00000004631 Sgce e-SG sarcoglycan, epsilon protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-34 chr19 8743034 8743226 + 2.23384849113406 NA TTS (NR_105958) TTS (NR_105958) 159 NR_105958 102465599 NR_105958 ENSMUSG00000098844 Mir6992 Gm27906|mmu-mir-6992 microRNA 6992 ncRNA unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-25 chr7 130492676 130493040 + 2.23384849113406 NA intron (NM_013799, intron 7 of 11) intron (NM_013799, intron 7 of 11) 26722 NM_001136054 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-17 chr13 38410319 38410547 + 2.23384849113406 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 51360 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-51 chr4 89059327 89059633 + 2.23384849113406 NA intron (NR_033533, intron 2 of 2) intron (NR_033533, intron 2 of 2) 9173 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-13 chr19 37739890 37740237 + 2.23384849113406 NA Intergenic Intergenic 42255 NM_007811 13082 Mm.42230 NM_007811 ENSMUSG00000024987 Cyp26a1 Cyp26|P450RA|P450RAI|RAH cytochrome P450, family 26, subfamily a, polypeptide 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-40 chr3 88481473 88481824 + 2.23384849113406 NA 3' UTR (NM_001002011, exon 12 of 12) 3' UTR (NM_001002011, exon 12 of 12) 11664 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-26 chr7 135621614 135621906 + 2.23384849113406 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 15932 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-27 chr17 71617235 71617548 + 2.23384849113406 NA intron (NM_175639, intron 1 of 17) intron (NM_175639, intron 1 of 17) 1176 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-66 chr9 49818114 49818466 + 2.23384849113406 NA Intergenic Intergenic -18897 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-39 chr3 84703137 84703326 + 2.23384849113406 NA 3' UTR (NM_177260, exon 7 of 7) 3' UTR (NM_177260, exon 7 of 7) 37039 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-3 chr12 33278816 33279114 + 2.23384849113406 NA Intergenic Intergenic -23550 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-21 chr4 82305255 82305581 + 2.23384849113406 NA intron (NM_008687, intron 8 of 8) intron (NM_008687, intron 8 of 8) 200361 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-9 chr11 96005120 96005351 + 2.23384849113406 NA intron (NM_009951, intron 1 of 14) CpG 709 NM_009951 140486 Mm.294769 NM_009951 ENSMUSG00000013415 Igf2bp1 AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|IMP1|Neilsen|ZBP-1|Zbp1|mir-3063 insulin-like growth factor 2 mRNA binding protein 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-3 chr10 111636486 111636695 + 2.23384849113406 NA Intergenic Intergenic -42317 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-47 chr3 116848872 116849223 + 2.23384849113406 NA Intergenic RSINE1|SINE|B4 -10520 NM_001113478 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-20 chr14 57398197 57398410 + 2.23384849113406 NA intron (NM_030004, intron 1 of 7) CpG 180 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak1_4_14_-1.84308369349036_2.98534874886334_2.23384849113406 chr2 29124533 29124720 + 2.23384849113406 NA promoter-TSS (NM_198033) promoter-TSS (NM_198033) -366 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-6 chr15 58162929 58163140 + 2.23384849113406 NA Intergenic Intergenic 21668 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-12 chr18 61060361 61060582 + 2.23384849113406 NA intron (NM_008809, intron 2 of 22) intron (NM_008809, intron 2 of 22) 15321 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-45 chr3 105010489 105010811 + 2.23384849113406 NA intron (NM_030249, intron 4 of 5) intron (NM_030249, intron 4 of 5) 42303 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-15 chr12 77080285 77080533 + 2.23384849113406 NA Intergenic Intergenic -118161 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-27 chr8 33880824 33881243 + 2.23384849113406 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 48830 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406 chr10 4333755 4334042 + 2.23384849113406 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 53577 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-23 chr15 25759450 25759926 + 2.23384849113406 NA intron (NM_001353142, intron 1 of 20) intron (NM_001353142, intron 1 of 20) 6482 NM_001353142 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-44 chr3 98016500 98016691 + 2.23384849113406 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 3057 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-22 chr6 24527247 24527490 + 2.23384849113406 NA promoter-TSS (NM_080847) promoter-TSS (NM_080847) 158 NR_154219 68202 Mm.275780 NM_026614 ENSMUSG00000023089 Ndufa5 2900002J19Rik|CI-13kD-B NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-9 chr17 82939018 82939262 + 2.23384849113406 NA Intergenic Intergenic 139085 NR_045094 100503434 Mm.187281 NR_045094 Gm19689 - predicted gene, 19689 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-41 chr3 88632873 88633071 + 2.23384849113406 NA exon (NM_001198911, exon 6 of 23) exon (NM_001198911, exon 6 of 23) 11578 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-69 chr9 70240663 70240880 + 2.23384849113406 NA intron (NM_181072, intron 1 of 27) PB1D11|SINE|Alu 33421 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-48 chr3 138210344 138210553 + 2.23384849113406 NA TTS (NR_045760) TTS (NR_045760) -7325 NM_009626 11529 Mm.8473 NM_009626 ENSMUSG00000055301 Adh7 AI325182|Adh-3|Adh-3e|Adh-3t|Adh3|Adh3-e|Adh3-t|Adh4|Adt-1 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-13 chr12 16846709 16846992 + 2.23384849113406 NA Intergenic Intergenic 35885 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-36 chr2 130628959 130629283 + 2.23384849113406 NA intron (NM_080562, intron 1 of 5) (CAAA)n|Simple_repeat|Simple_repeat 906 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-22 chr15 5512739 5512986 + 2.23384849113406 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 16544 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-67 chr9 60324175 60324466 + 2.23384849113406 NA intron (NM_001040426, intron 6 of 17) intron (NM_001040426, intron 6 of 17) -183100 NM_172444 207596 Mm.28791 NM_172444 ENSMUSG00000032289 Thsd4 ADAMTSL-6|ADAMTSL6|AI585901|Adamtsl4|B230114P05Rik thrombospondin, type I, domain containing 4 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-53 chr5 21490175 21490456 + 2.23384849113406 NA intron (NM_001199632, intron 19 of 20) intron (NM_001199632, intron 19 of 20) -53212 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-46 chr3 109163589 109163802 + 2.23384849113406 NA intron (NM_172685, intron 9 of 9) intron (NM_172685, intron 9 of 9) 40546 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-28 chr8 39008934 39009295 + 2.23384849113406 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 3269 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-2 chr10 86339205 86339496 + 2.23384849113406 NA intron (NM_011595, intron 2 of 4) intron (NM_011595, intron 2 of 4) 38938 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-29 chr18 36446143 36446402 + 2.23384849113406 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 8223 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-64 chr8 41124887 41125103 + 2.23384849113406 NA intron (NM_001005863, intron 1 of 13) intron (NM_001005863, intron 1 of 13) 8731 NM_001005863 102103 Mm.149438 NM_001005863 ENSMUSG00000045636 Mtus1 AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288 mitochondrial tumor suppressor 1 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-10 chr18 25367833 25368067 + 2.23384849113406 NA intron (NM_001033532, intron 8 of 10) intron (NM_001033532, intron 8 of 10) 198930 NM_001033532 225289 Mm.391081 NM_001033532 ENSMUSG00000033632 AW554918 4921538P22|AI461742|Kiaa1328|mKIAA1328 expressed sequence AW554918 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-18 chr14 25509410 25509684 + 2.23384849113406 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -24892 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-31 chr18 63149886 63150148 + 2.23384849113406 NA intron (NM_001039485, intron 5 of 53) intron (NM_001039485, intron 5 of 53) 172101 NM_028017 108123 Mm.292687 NM_028017 ENSMUSG00000024581 Napg 2400003O04Rik|SNARE N-ethylmaleimide sensitive fusion protein attachment protein gamma protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-71 chrX 101932493 101932698 + 2.23384849113406 NA intron (NM_001163610, intron 1 of 7) intron (NM_001163610, intron 1 of 7) 83210 NM_001163610 100042480 Mm.232 NM_001163610 ENSMUSG00000079481 Nhsl2 1110062M06Rik|6430511F03|AI225852|AW488865|EG621083|Gm10456 NHS-like 2 protein-coding unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-23 chr6 39007586 39007924 + 2.23384849113406 NA intron (NM_011539, intron 5 of 12) intron (NM_011539, intron 5 of 12) 59831 NR_040523 69986 Mm.490941 NR_040523 ENSMUSG00000100121 1700025N23Rik - RIKEN cDNA 1700025N23 gene ncRNA unique_peak2_4_14_-1.84308369349036_2.98534874886334_2.23384849113406-14 chr19 47292052 47292436 + 2.23384849113406 NA intron (NM_008018, intron 8 of 14) intron (NM_008018, intron 8 of 14) -18655 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-52 chr4 155893845 155894154 + 2.23384849113406 NA intron (NM_207223, intron 1 of 24) intron (NM_207223, intron 1 of 24) 2124 NM_207223 140500 Mm.219591 NM_207223 ENSMUSG00000029033 Acap3 Centb5|Kiaa1716-hp|mKIAA1716 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding unique_peak1_16_4_1.49495774202233_3.06940696589853_2.23384849113406-7 chr11 67380622 67380825 + 2.23384849113406 NA Intergenic Intergenic 53620 NM_001081250 544791 Mm.461064 NM_001081250 ENSMUSG00000060180 Myh13 MyHC-eo myosin, heavy polypeptide 13, skeletal muscle protein-coding common_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562-3 chr19 3998965 3999470 + 2.23152841032562 NA exon (NM_011533, exon 8 of 8) exon (NM_011533, exon 8 of 8) -1363 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000110949 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak2_22_42_-1.1763564733326_4.8380865180358_2.23152841032562-2 chr9 15239223 15239722 + 2.23152841032562 NA intron (NM_026955, intron 1 of 3) intron (NM_026955, intron 1 of 3) 427 NM_026955 69137 Mm.41396 NM_026955 ENSMUSG00000031937 Vstm5 2200002K05Rik V-set and transmembrane domain containing 5 protein-coding common_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562 chr13 24537178 24537752 + 2.23152841032562 NA Intergenic Intergenic -44724 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding unique_peak2_22_42_-1.1763564733326_4.8380865180358_2.23152841032562 chr19 4097872 4098336 + 2.23152841032562 NA exon (NM_026373, exon 3 of 4) exon (NM_026373, exon 3 of 4) 753 NM_026373 52004 Mm.29609 NM_026373 ENSMUSG00000024856 Cdk2ap2 5830466O21Rik|D19Ertd144e|Doc-1r CDK2-associated protein 2 protein-coding unique_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562-2 chr15 10693521 10694084 + 2.23152841032562 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 19738 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_22_42_-1.1763564733326_4.8380865180358_2.23152841032562 chr19 11964760 11965117 + 2.23152841032562 NA promoter-TSS (NM_001033174) promoter-TSS (NM_001033174) -906 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562-2 chr15 83173829 83174244 + 2.23152841032562 NA Intergenic Intergenic -1828 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding unique_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562-4 chr2 68222674 68223138 + 2.23152841032562 NA intron (NM_016866, intron 16 of 17) intron (NM_016866, intron 16 of 17) 118234 NM_020283 26877 Mm.226435 NM_020283 ENSMUSG00000034780 B3galt1 beta3Gal-T1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein-coding unique_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562-3 chr15 64471183 64471614 + 2.23152841032562 NA Intergenic Intergenic -88479 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_22_42_-1.1763564733326_4.8380865180358_2.23152841032562 chr7 28810920 28811260 + 2.23152841032562 NA exon (NM_177301, exon 1 of 13) exon (NM_177301, exon 1 of 13) 200 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding unique_peak1_50_19_1.06873836467654_4.85629727722563_2.23152841032562 chr10 69212676 69213110 + 2.23152841032562 NA promoter-TSS (NM_001252637) promoter-TSS (NM_001252637) 205 NM_001331193 320700 Mm.396529 NM_001331193 ENSMUSG00000090622 A930033H14Rik - RIKEN cDNA A930033H14 gene protein-coding common_peak1_123_63_0.663394559979538_6.33169727998977_2.23047157235697 chr3 38274800 38276382 + 2.23047157235697 NA Intergenic Intergenic -67472 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak1_46_17_1.10373630185974_4.72179315237218_2.22933157796382 chr3 144989279 144989996 + 2.22933157796382 NA Intergenic Intergenic -14592 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding unique_peak1_46_17_1.10373630185974_4.72179315237218_2.22933157796382-2 chr8 88288877 88289370 + 2.22933157796382 NA promoter-TSS (NM_001037723) promoter-TSS (NM_001037723) 57 NM_001037723 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_46_17_1.10373630185974_4.72179315237218_2.22933157796382 chr8 17556212 17556709 + 2.22933157796382 NA Intergenic B1F1|SINE|Alu -21075 NM_053171 94109 Mm.436988 NM_053171 ENSMUSG00000060924 Csmd1 B930082H09|mKIAA1890 CUB and Sushi multiple domains 1 protein-coding common_peak2_20_39_-1.20233841929474_4.72075888523999_2.22933157796381 chr12 3371092 3371662 + 2.22933157796381 NA intron (NM_008445, intron 1 of 7) intron (NM_008445, intron 1 of 7) 6245 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak2_20_39_-1.20233841929474_4.72075888523999_2.22933157796381 chr13 21914004 21914575 + 2.22933157796381 NA Intergenic Intergenic -17240 NR_035500 100316716 NR_035500 ENSMUSG00000088148 Mir1983 mmu-mir-1983 microRNA 1983 ncRNA common_peak2_20_39_-1.20233841929474_4.72075888523999_2.22933157796381-2 chr3 101072954 101073410 + 2.22933157796381 NA exon (NM_011197, exon 4 of 9) exon (NM_011197, exon 4 of 9) 36984 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak2_19_39_-1.27223115191569_4.68581251892952_2.22933157796381 chr5 28071411 28071819 + 2.22933157796381 NA exon (NM_153526, exon 1 of 5) exon (NM_153526, exon 1 of 5) 203 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding unique_peak2_20_39_-1.20233841929474_4.72075888523999_2.22933157796381-2 chr7 36095946 36096659 + 2.22933157796381 NA Intergenic Intergenic -293313 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding unique_peak2_19_39_-1.27223115191569_4.68581251892952_2.22933157796381 chr16 57366732 57367243 + 2.22933157796381 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 13710 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_19_39_-1.27223115191569_4.68581251892952_2.22933157796381-2 chr8 33903591 33904211 + 2.22933157796381 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 25962 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak2_11_28_-1.54005036910908_4.08795581057303_2.22881803703862-2 chr12 108757579 108757990 + 2.22881803703862 NA Intergenic Intergenic -35527 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding unique_peak2_11_28_-1.54005036910908_4.08795581057303_2.22881803703862-4 chr6 91402462 91403046 + 2.22881803703862 NA intron (NM_009527, intron 2 of 3) intron (NM_009527, intron 2 of 3) 8615 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding unique_peak2_11_28_-1.54005036910908_4.08795581057303_2.22881803703862 chr10 23557435 23557679 + 2.22881803703862 NA Intergenic Intergenic -207614 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-4 chr18 12611553 12612224 + 2.22881803703862 NA Intergenic Intergenic -31645 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-8 chr9 66239880 66240435 + 2.22881803703862 NA intron (NM_010019, intron 4 of 11) intron (NM_010019, intron 4 of 11) 81931 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-5 chr3 122054118 122054723 + 2.22881803703862 NA intron (NM_007378, intron 3 of 49) intron (NM_007378, intron 3 of 49) 9960 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak2_11_28_-1.54005036910908_4.08795581057303_2.22881803703862-3 chr15 27783814 27784268 + 2.22881803703862 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -102499 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-3 chr18 9388338 9388768 + 2.22881803703862 NA intron (NM_026484, intron 1 of 9) intron (NM_026484, intron 1 of 9) 61601 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-7 chr8 46430766 46431232 + 2.22881803703862 NA Intergenic Intergenic -40038 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-2 chr13 63748730 63748983 + 2.22881803703862 NA Intergenic Intergenic -14558 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA common_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862 chr13 63658175 63658720 + 2.22881803703862 NA Intergenic Intergenic 75851 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862 chr10 120615027 120615841 + 2.22881803703862 NA Intergenic Intergenic -138965 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-9 chrX 74425573 74425953 + 2.22881803703862 NA intron (NM_001161421, intron 1 of 10) intron (NM_001161421, intron 1 of 10) 1151 NM_001136067 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-2 chr13 51754353 51754849 + 2.22881803703862 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 39146 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak1_33_10_1.35039923869915_4.13463123798687_2.22881803703862-6 chr5 36618686 36619397 + 2.22881803703862 NA intron (NM_001081232, intron 4 of 8) intron (NM_001081232, intron 4 of 8) -32815 NM_001113362 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak2_118_143_-0.565490074104974_6.88717996438982_2.22744252556355 chr8 41239732 41240494 + 2.22744252556355 NA intron (NM_023662, intron 1 of 37) CpG 354 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding common_peak2_81_106_-0.670507418800709_6.40621327700079_2.22667690327212 chr9 20520662 20522250 + 2.22667690327212 NA promoter-TSS (NM_001082485) promoter-TSS (NM_001082485) -37 NM_001082485 77519 Mm.431849 NM_001082485 ENSMUSG00000060510 Zfp266 5330440G10Rik|5730601F06Rik|AW552317 zinc finger protein 266 protein-coding common_peak2_107_132_-0.589790564174275_6.76038715341405_2.22487332924148 chr15 11573034 11574403 + 2.22487332924148 NA Intergenic Intergenic -174060 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_71_31_0.884656269099461_5.44232813454973_2.22438495163203-2 chr19 38818274 38819041 + 2.22438495163203 NA intron (NM_021315, intron 1 of 20) intron (NM_021315, intron 1 of 20) 580 NM_021315 57753 Mm.86482 NM_021315 ENSMUSG00000024999 Noc3l AF233884|Fad24 NOC3 like DNA replication regulator protein-coding common_peak2_36_59_-0.975929854551077_5.41892566833298_2.22438495163203-2 chr11 44518505 44519294 + 2.22438495163203 NA promoter-TSS (NM_028862) promoter-TSS (NM_028862) -65 NM_028862 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding unique_peak1_71_31_0.884656269099461_5.44232813454973_2.22438495163203 chr13 55471880 55473048 + 2.22438495163203 NA TTS (NM_019813) TTS (NM_019813) 5312 NR_105909 102465569 NR_105909 ENSMUSG00000098341 Mir6944 Gm27710|mmu-mir-6944 microRNA 6944 ncRNA common_peak2_36_59_-0.975929854551077_5.41892566833298_2.22438495163203 chr10 120810692 120811825 + 2.22438495163203 NA intron (NM_177092, intron 5 of 6) intron (NM_177092, intron 5 of 6) 45526 NR_038003 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_71_31_0.884656269099461_5.44232813454973_2.22438495163203 chr15 31345243 31345665 + 2.22438495163203 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 22305 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak1_100_49_0.725641709482689_6.00667704451607_2.22432009274866-2 chr18 34623947 34624802 + 2.22432009274866 NA promoter-TSS (NM_001166406) promoter-TSS (NM_001166406) -250 NM_001166407 19348 Mm.258846 NM_009004 ENSMUSG00000003779 Kif20a AA415432|Rab6kifl kinesin family member 20A protein-coding common_peak1_100_49_0.725641709482689_6.00667704451607_2.22432009274866 chr10 121625596 121626352 + 2.22432009274866 NA intron (NM_001359618, intron 1 of 24) CpG 358 NM_001081056 73192 Mm.25042 NM_001081056 ENSMUSG00000034667 Xpot 1110004L07Rik|3110065H13Rik|AI452076|C79645|EXPORTIN-T exportin, tRNA (nuclear export receptor for tRNAs) protein-coding common_peak1_124_149_-0.553917909162937_6.95185973591441_2.22342632872705 chr11 69900536 69902165 + 2.22342632872705 NA promoter-TSS (NM_001316696) promoter-TSS (NM_001316696) -364 NM_027419 70419 Mm.272859 NM_027419 ENSMUSG00000018570 2810408A11Rik 1700019L01Rik|4930470J18Rik RIKEN cDNA 2810408A11 gene protein-coding common_peak2_124_149_-0.553917909162937_6.95185973591441_2.22342632872705 chr18 75404437 75405792 + 2.22342632872705 NA Intergenic Intergenic 37749 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_112_56_0.69743268749551_6.1816063579125_2.22174510361786 chr14 26534052 26534925 + 2.22174510361786 NA 5' UTR (NM_001347494, exon 1 of 20) 5' UTR (NM_001347494, exon 1 of 20) 136 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak1_111_56_0.684699120480695_6.17523957440509_2.22174510361786 chr19 17354999 17356643 + 2.22174510361786 NA intron (NM_010265, intron 1 of 2) intron (NM_010265, intron 1 of 2) 846 NM_173442 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_112_56_0.69743268749551_6.1816063579125_2.22174510361786 chr6 125009202 125010293 + 2.22174510361786 NA promoter-TSS (NM_001347452) promoter-TSS (NM_001347452) 78 NM_175557 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding common_peak2_191_213_-0.451756278675629_7.51558884706333_2.22066215872703 chr7 101969848 101972056 + 2.22066215872703 NA intron (NM_133947, intron 1 of 24) intron (NM_133947, intron 1 of 24) 1109 NM_133947 101706 Mm.27259 NM_133947 ENSMUSG00000066306 Numa1 6720401E04Rik|AA764025|AL022610|AU014979|NuMA nuclear mitotic apparatus protein 1 protein-coding common_peak2_31_52_-1.00493538991865_5.22545275960388_2.21947156384788 chr8 33902440 33902954 + 2.21947156384788 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 27166 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_30_52_-1.05041593543717_5.20271248684461_2.21947156384788 chr1 31164836 31165252 + 2.21947156384788 NA intron (NR_033445, intron 2 of 2) intron (NR_033445, intron 2 of 2) -11391 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding unique_peak2_30_52_-1.05041593543717_5.20271248684461_2.21947156384788 chr9 59658359 59659316 + 2.21947156384788 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 2469 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding unique_peak2_31_52_-1.00493538991865_5.22545275960388_2.21947156384788-2 chr2 60687912 60688993 + 2.21947156384788 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -14759 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak2_31_52_-1.00493538991865_5.22545275960388_2.21947156384788 chr12 79531965 79532907 + 2.21947156384788 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 235085 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_62_26_0.938482796083366_5.22412890020515_2.21947156384787 chr7 25710140 25710856 + 2.21947156384787 NA TTS (NM_028771) TTS (NM_028771) 8555 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_62_26_0.938482796083366_5.22412890020515_2.21947156384787 chr6 121067095 121067685 + 2.21947156384787 NA intron (NR_138098, intron 1 of 1) intron (NR_138098, intron 1 of 1) 2926 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA unique_peak1_62_26_0.938482796083366_5.22412890020515_2.21947156384787-2 chr7 58677403 58677935 + 2.21947156384787 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 19467 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-11 chr4 54950217 54950590 + 2.21753093801298 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 2458 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-14 chr9 60687863 60688133 + 2.21753093801298 NA promoter-TSS (NM_001146047) promoter-TSS (NM_001146047) 136 NM_001146046 102747 Mm.269413 NM_145616 ENSMUSG00000047766 Lrrc49 AI430817|AW050057|D430025H09Rik|PGs4|p79 leucine rich repeat containing 49 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-18 chr2 71594085 71594548 + 2.21753093801298 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -47562 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-4 chr11 117257696 117258158 + 2.21753093801298 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -8319 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-3 chr10 17038391 17038759 + 2.21753093801298 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 57207 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-14 chr5 112283472 112283733 + 2.21753093801298 NA intron (NM_001326590, intron 1 of 5) C-rich|Low_complexity|Low_complexity 6911 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298 chr5 5181068 5181379 + 2.21753093801298 NA intron (NM_011074, intron 5 of 14) intron (NM_011074, intron 5 of 14) 84845 NM_001310448 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-3 chr12 51952017 51952333 + 2.21753093801298 NA intron (NM_177171, intron 7 of 35) intron (NM_177171, intron 7 of 35) 19146 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-7 chr11 102429556 102430000 + 2.21753093801298 NA promoter-TSS (NM_008175) promoter-TSS (NM_008175) -544 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-22 chr6 38950918 38951226 + 2.21753093801298 NA intron (NM_011539, intron 2 of 12) intron (NM_011539, intron 2 of 12) 32086 NM_011539 21391 Mm.4054 NM_011539 ENSMUSG00000029925 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-12 chr4 132511107 132511550 + 2.21753093801298 NA promoter-TSS (NM_144907) promoter-TSS (NM_144907) -872 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-2 chr11 105953283 105953523 + 2.21753093801298 NA Intergenic Intergenic -8916 NM_001356374 13056 Mm.149403 NM_007805 ENSMUSG00000019590 Cyb561 - cytochrome b-561 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-11 chr7 127007610 127007909 + 2.21753093801298 NA intron (NM_080638, intron 1 of 14) intron (NM_080638, intron 1 of 14) 6835 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-19 chr2 125277815 125278250 + 2.21753093801298 NA Intergenic Intergenic 30517 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-9 chr4 58187874 58188105 + 2.21753093801298 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 18607 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-13 chr5 72808173 72808558 + 2.21753093801298 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -55588 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-23 chr6 52211224 52211518 + 2.21753093801298 NA intron (NR_015611, intron 1 of 2) intron (NR_015611, intron 1 of 2) 1696 NM_010452 15400 Mm.71533 NM_010452 ENSMUSG00000079560 Hoxa3 Hox-1.5|Mo-10 homeobox A3 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-6 chr19 5344242 5344670 + 2.21753093801298 NA TTS (NM_139301) TTS (NM_139301) 5118 NM_028623 73720 Mm.36816 NM_028623 ENSMUSG00000024846 Cst6 1110017E11Rik|N28197|ichq cystatin E/M protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-2 chr11 83606508 83607067 + 2.21753093801298 NA intron (NR_036453, intron 2 of 8) intron (NR_036453, intron 2 of 8) -13700 NM_009139 20305 Mm.137 NM_009139 ENSMUSG00000018927 Ccl6 MRP-1|Scya6|c10 chemokine (C-C motif) ligand 6 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-16 chr17 75804682 75805111 + 2.21753093801298 NA Intergenic Intergenic -56127 NR_033456 100043885 Mm.127562 NR_033456 Gm4710 - predicted gene 4710 ncRNA unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298 chr1 106399154 106399428 + 2.21753093801298 NA Intergenic Intergenic 147340 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-8 chr4 13517473 13517742 + 2.21753093801298 NA Intergenic Intergenic -225695 NM_001111026 12395 Mm.4909 NM_009822 ENSMUSG00000006586 Runx1t1 Cbfa2t1h|ETO|MTG8 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-13 chr15 32263412 32263716 + 2.21753093801298 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 18751 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-24 chr7 28178872 28179175 + 2.21753093801298 NA promoter-TSS (NM_010092) promoter-TSS (NM_010092) -460 NM_001037957 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298 chr10 81319986 81320239 + 2.21753093801298 NA promoter-TSS (NM_027381) promoter-TSS (NM_027381) -991 NM_027381 70312 Mm.87628 NM_027381 ENSMUSG00000034889 Cactin 2510012J08Rik cactin, spliceosome C complex subunit protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-10 chr14 54616301 54616801 + 2.21753093801298 NA TTS (NR_030457) TTS (NR_030457) 234 NR_030457 751525 NR_030457 ENSMUSG00000076128 Mir686 Mirn686|mmu-mir-686 microRNA 686 ncRNA unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-21 chr4 117844767 117845144 + 2.21753093801298 NA intron (NM_008135, intron 2 of 13) intron (NM_008135, intron 2 of 13) -4324 NM_001355175 14664 Mm.244549 NM_008135 ENSMUSG00000028542 Slc6a9 Glyt-1|Glyt1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-4 chr11 5849792 5850066 + 2.21753093801298 NA Intergenic Intergenic -11913 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-15 chr7 89565742 89566242 + 2.21753093801298 NA Intergenic MER45A|DNA|hAT-Tip100 -38805 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-4 chr15 41738173 41738488 + 2.21753093801298 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -50665 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-25 chr8 78798973 78799376 + 2.21753093801298 NA Intergenic Intergenic 21978 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-9 chr13 59658208 59658414 + 2.21753093801298 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 17473 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-9 chr3 27183128 27183464 + 2.21753093801298 NA intron (NM_178772, intron 1 of 4) intron (NM_178772, intron 1 of 4) 292 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-8 chr11 106134544 106135004 + 2.21753093801298 NA intron (NM_011947, intron 6 of 15) intron (NM_011947, intron 6 of 15) 25153 NM_001356459 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-12 chr7 141265561 141265902 + 2.21753093801298 NA 5' UTR (NM_001252600, exon 2 of 9) 5' UTR (NM_001252600, exon 2 of 9) 693 NM_001252601 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-8 chr2 71453491 71453863 + 2.21753093801298 NA intron (NM_025633, intron 1 of 9) intron (NM_025633, intron 1 of 9) 339 NM_025633 66559 Mm.152796 NM_025633 ENSMUSG00000041921 Metap1d 2310066F24Rik|3110033D18Rik|AV117938|MAP 1D|Map1d|MetAP 1D|Metapl1 methionyl aminopeptidase type 1D (mitochondrial) protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-26 chr8 91944192 91944641 + 2.21753093801298 NA Intergenic Intergenic -142762 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-16 chr8 11364917 11365312 + 2.21753093801298 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -52288 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-13 chr9 54645187 54645580 + 2.21753093801298 NA intron (NM_053178, intron 1 of 13) intron (NM_053178, intron 1 of 13) 16502 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-17 chrX 95947509 95947855 + 2.21753093801298 NA intron (NM_152822, intron 8 of 12) intron (NM_152822, intron 8 of 12) 9292 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-7 chr2 126037160 126037555 + 2.21753093801298 NA intron (NM_008008, intron 2 of 3) intron (NM_008008, intron 2 of 3) 2699 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-11 chr14 56689322 56689670 + 2.21753093801298 NA intron (NR_153396, intron 9 of 12) intron (NR_153396, intron 9 of 12) 11504 NR_046209 100503823 Mm.474486 NR_046209 Gm16973 - predicted gene, 16973 ncRNA unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-15 chr16 57561252 57561663 + 2.21753093801298 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 12215 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-3 chr11 113751602 113751824 + 2.21753093801298 NA promoter-TSS (NM_020006) promoter-TSS (NM_020006) 102 NM_001163346 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-7 chr2 29622459 29623015 + 2.21753093801298 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 3017 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-2 chr10 4272113 4272351 + 2.21753093801298 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 5903 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298 chr10 88503362 88503609 + 2.21753093801298 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 485 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-12 chr15 32246601 32247028 + 2.21753093801298 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 2001 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-6 chr17 26917303 26917738 + 2.21753093801298 NA intron (NM_053173, intron 1 of 10) CpG 429 NM_053173 16580 Mm.491138 NM_016761 ENSMUSG00000024301 Kifc5b Hset|KNSL2|Kifc5a kinesin family member C5B protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-6 chr11 72119981 72120254 + 2.21753093801298 NA exon (NM_001081641, exon 2 of 19) exon (NM_001081641, exon 2 of 19) 15772 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-10 chr6 136518806 136519022 + 2.21753093801298 NA promoter-TSS (NM_019426) promoter-TSS (NM_019426) 63 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-10 chr4 32302877 32303239 + 2.21753093801298 NA Intergenic Intergenic -114377 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_6_21_-1.91362256569888_3.50262033578786_2.21753093801298-5 chr16 8636015 8636410 + 2.21753093801298 NA exon (NM_025708, exon 2 of 2) exon (NM_025708, exon 2 of 2) 1489 NM_025708 66690 Mm.10068 NM_025708 ENSMUSG00000043140 Tmem186 2810440M13Rik|4432406C05Rik|AI648175|AW210586 transmembrane protein 186 protein-coding unique_peak1_25_6_1.61818325239751_3.61644654825636_2.21753093801298-5 chr17 32891367 32891564 + 2.21753093801298 NA 5' UTR (NM_207245, exon 1 of 4) 5' UTR (NM_207245, exon 1 of 4) 138 NM_207245 240066 Mm.26636 NM_207245 ENSMUSG00000095325 Zfp870 AI173952 zinc finger protein 870 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-17 chr2 30758430 30758768 + 2.21753093801298 NA Intergenic Intergenic 37389 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-5 chr11 54412924 54413329 + 2.21753093801298 NA intron (NM_029105, intron 12 of 13) intron (NM_029105, intron 12 of 13) -25053 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-20 chr4 114500577 114500806 + 2.21753093801298 NA intron (NM_001085549, intron 2 of 6) intron (NM_001085549, intron 2 of 6) 93967 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_24_6_1.56199891966795_3.58835438189158_2.21753093801298-14 chr15 77075906 77076291 + 2.21753093801298 NA Intergenic Intergenic -8300 NR_108037 74303 Mm.444304 NR_108037 ENSMUSG00000097267 1700109K24Rik 4933425G21Rik RIKEN cDNA 1700109K24 gene ncRNA common_peak2_289_305_-0.376927881707994_8.06892390183866_2.21722092893865 chr1 136227949 136230710 + 2.21722092893865 NA intron (NM_028872, intron 1 of 9) intron (NM_028872, intron 1 of 9) 4951 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding common_peak2_113_138_-0.575996995524151_6.83094257496143_2.216819777845 chr7 102249266 102250943 + 2.216819777845 NA promoter-TSS (NM_019566) promoter-TSS (NM_019566) 14 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak1_95_46_0.742176835621125_5.9256772694882_2.21542829695182 chr7 88467614 88468598 + 2.21542829695182 NA intron (NM_028238, intron 2 of 2) intron (NM_028238, intron 2 of 2) 37833 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding common_peak1_96_46_0.75702170273344_5.93309970304436_2.21542829695182-2 chr11 60933258 60934554 + 2.21542829695182 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 1849 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_96_46_0.75702170273344_5.93309970304436_2.21542829695182-3 chr5 139011036 139011936 + 2.21542829695182 NA Intergenic Intergenic -16533 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_96_46_0.75702170273344_5.93309970304436_2.21542829695182 chr1 39554622 39556124 + 2.21542829695182 NA intron (NM_001033135, intron 6 of 6) intron (NM_001033135, intron 6 of 6) -6533 NR_028555 100217461 NR_028555 ENSMUSG00000077704 Snord89 MBII-289 small nucleolar RNA, C/D box 89 snoRNA common_peak1_76_34_0.851551435226223_5.55505873455808_2.21281914625673 chr14 57798313 57799251 + 2.21281914625673 NA TTS (NR_037238) TTS (NR_037238) 358 NR_037238 100526476 NR_037238 ENSMUSG00000092784 Mir3077 mir-3077|mmu-mir-3077 microRNA 3077 ncRNA common_peak2_40_63_-0.921985452826318_5.53900727358684_2.21281914625673-2 chr8 35596542 35597540 + 2.21281914625673 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -8021 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_76_34_0.851551435226223_5.55505873455808_2.21281914625673 chr19 5049525 5050092 + 2.21281914625673 NA promoter-TSS (NM_145495) promoter-TSS (NM_145495) -1000 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak2_40_63_-0.921985452826318_5.53900727358684_2.21281914625673 chr8 32285890 32286629 + 2.21281914625673 NA Intergenic Intergenic 134364 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA common_peak1_149_80_0.596229481921895_6.63796474384557_2.21121079324486 chr4 119421615 119423256 + 2.21121079324486 NA promoter-TSS (NM_001355214) promoter-TSS (NM_001355214) -15 NM_026494 106564 Mm.27245 NM_026494 ENSMUSG00000028636 Ppcs 6330579B17Rik|AI413471|AI790434 phosphopantothenoylcysteine synthetase protein-coding common_peak1_192_214_-0.451040479119269_7.52267261002983_2.21023084479552 chr8 119812209 119813225 + 2.21023084479552 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 27862 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_163_187_-0.490684263650444_7.30924671985242_2.20996660504753 chr7 141475190 141476585 + 2.20996660504753 NA promoter-TSS (NM_001252588) promoter-TSS (NM_001252588) -493 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak1_51_75_-0.829444318561716_5.83320535416273_2.20923096619066 chr10 34282223 34282977 + 2.20923096619066 NA exon (NM_009433, exon 1 of 1) exon (NM_009433, exon 1 of 1) 410 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding common_peak2_51_75_-0.829444318561716_5.83320535416273_2.20923096619066 chr10 128747939 128748767 + 2.20923096619066 NA promoter-TSS (NM_001253704) promoter-TSS (NM_001253704) -102 NM_001170869 78428 Mm.27358 NM_030100 ENSMUSG00000064030 Pym1 A030010B05Rik|Pym|Wibg PYM homolog 1, exon junction complex associated factor protein-coding common_peak1_91_43_0.776366703585714_5.84761497043015_2.20923096619064-2 chr17 56026849 56028107 + 2.20923096619064 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 9159 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak1_90_43_0.760710625818701_5.83978693154665_2.20923096619064 chr17 83514026 83514637 + 2.20923096619064 NA promoter-TSS (NM_001159529) promoter-TSS (NM_001159529) 2 NM_009187 20463 Mm.30072 NM_009187 ENSMUSG00000024248 Cox7a2l COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like protein-coding common_peak1_91_43_0.776366703585714_5.84761497043015_2.20923096619064 chr11 76058988 76059878 + 2.20923096619064 NA intron (NM_026664, intron 19 of 21) intron (NM_026664, intron 19 of 21) -31651 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding common_peak1_205_118_0.495714622177039_7.14267507439646_2.20895947272416 chr1 34120350 34123009 + 2.20895947272416 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 4320 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak1_64_88_-0.73759333733065_6.10693676230107_2.20746073793344 chr5 64197233 64198189 + 2.20746073793344 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -32646 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_44_67_-0.876094693823755_5.64941549433846_2.20715782907906 chr17 26138750 26139314 + 2.20715782907906 NA 5' UTR (NM_009733, exon 1 of 11) 5' UTR (NM_009733, exon 1 of 11) 346 NM_001159598 12005 Mm.23684 NM_009733 ENSMUSG00000024182 Axin1 AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly axin 1 protein-coding common_peak2_81_37_0.823032054156853_5.65944354052201_2.20715782907905 chr15 101941450 101941955 + 2.20715782907905 NA Intergenic Intergenic -1378 NM_146063 223917 Mm.162744 NM_146063 ENSMUSG00000061397 Krt79 BC031593 keratin 79 protein-coding common_peak1_81_37_0.823032054156853_5.65944354052201_2.20715782907905 chr1 131137000 131138042 + 2.20715782907905 NA intron (NM_145508, intron 1 of 2) intron (NM_145508, intron 1 of 2) 713 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak2_92_117_-0.631357907581605_6.56696409557104_2.20683735795302 chr4 141537232 141538527 + 2.20683735795302 NA intron (NM_001347235, intron 1 of 14) CpG 718 NM_001347235 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak1_86_40_0.798196618986637_5.7566503141114_2.20625128121975-2 chr15 98525470 98526767 + 2.20625128121975 NA TTS (NR_034052) TTS (NR_034052) 341 NR_034052 100217416 Mm.296240 NR_034052 ENSMUSG00000065939 Snora2b MBI-137 small nucleolar RNA, H/ACA box 2B snoRNA unique_peak1_86_40_0.798196618986637_5.7566503141114_2.20625128121975 chr2 151918350 151919640 + 2.20625128121975 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 7788 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_47_71_-0.866104334570307_5.73687283415716_2.20625128121975 chr8 81015162 81015433 + 2.20625128121975 NA promoter-TSS (NM_027554) promoter-TSS (NM_027554) -391 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak2_47_71_-0.866104334570307_5.73687283415716_2.20625128121975 chr4 81442360 81443229 + 2.20625128121975 NA promoter-TSS (NM_010820) promoter-TSS (NM_010820) 21 NM_010820 17475 Mm.153039 NM_010820 ENSMUSG00000028402 Mpdz AI225843|B930003D11Rik|MUPP1 multiple PDZ domain protein protein-coding common_peak1_86_40_0.798196618986637_5.7566503141114_2.20625128121975 chr12 111704443 111705178 + 2.20625128121975 NA Intergenic Intergenic 8143 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak2_28_49_-1.06188818882421_5.11291209536262_2.19832861281706 chr12 86108642 86109610 + 2.19832861281706 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 26565 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_28_49_-1.06188818882421_5.11291209536262_2.19832861281706-3 chr13 55464195 55464998 + 2.19832861281706 NA intron (NM_001030296, intron 1 of 2) CpG 329 NM_001030296 432763 Mm.315457 NM_001030296 ENSMUSG00000034686 Prr7 XM_484263 proline rich 7 (synaptic) protein-coding common_peak2_28_49_-1.06188818882421_5.11291209536262_2.19832861281706-2 chr12 111453297 111454134 + 2.19832861281706 NA 3' UTR (NM_009396, exon 12 of 12) 3' UTR (NM_009396, exon 12 of 12) 11054 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_59_24_0.979621375851161_5.13366687770031_2.19832861281706 chr14 56668324 56668859 + 2.19832861281706 NA intron (NM_001360072, intron 1 of 13) CpG 343 NM_023773 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding unique_peak1_59_24_0.979621375851161_5.13366687770031_2.19832861281706 chr3 151296746 151298079 + 2.19832861281706 NA Intergenic Intergenic -140470 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_69_93_-0.710287838705079_6.1994449323251_2.19562147575703-2 chr13 94358593 94359463 + 2.19562147575703 NA promoter-TSS (NM_009680) promoter-TSS (NM_009680) 68 NM_009680 11774 Mm.21185 NM_009680 ENSMUSG00000021686 Ap3b1 AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2 adaptor-related protein complex 3, beta 1 subunit protein-coding common_peak2_69_93_-0.710287838705079_6.1994449323251_2.19562147575703-3 chr8 110794336 110795006 + 2.19562147575703 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 11253 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_69_93_-0.710287838705079_6.1994449323251_2.19562147575703 chr13 70723695 70724824 + 2.19562147575703 NA Intergenic Intergenic -86625 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_68_93_-0.730899947653929_6.18913887785067_2.19562147575703 chr1 89107623 89109210 + 2.19562147575703 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 38001 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_113_57_0.684963082071785_6.20046253616346_2.19562147575702-2 chr3 107822031 107823388 + 2.19562147575702 NA Intergenic ORR1F|LTR|ERVL-MaLR -54521 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak1_113_57_0.684963082071785_6.20046253616346_2.19562147575702 chr3 57304775 57306198 + 2.19562147575702 NA Intergenic Intergenic -3498 NM_001355130 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak1_207_119_0.497482640126862_7.15563191567195_2.19557375765409 chr11 20740731 20742488 + 2.19557375765409 NA promoter-TSS (NM_001290545) promoter-TSS (NM_001290545) -53 NM_181411 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding common_peak2_177_99_0.537396057051959_6.9125542183007_2.19547590025413 chr15 99032213 99033448 + 2.19547590025413 NA intron (NM_009448, intron 1 of 3) intron (NM_009448, intron 1 of 3) 2939 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_102_50_0.725162023086732_6.03500635351486_2.19496667975224 chr3 151298573 151299718 + 2.19496667975224 NA Intergenic Intergenic -138737 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_60_84_-0.762234866834826_6.02827350272029_2.19496667975223 chr1 162570091 162571448 + 2.19496667975223 NA promoter-TSS (NM_001347125) promoter-TSS (NM_001347125) -59 NM_001347125 53330 Mm.10699 NM_016796 ENSMUSG00000026696 Vamp4 D1Ertd147e|Vamp-4 vesicle-associated membrane protein 4 protein-coding common_peak2_98_123_-0.613349703334906_6.64752145871942_2.19221019244939 chr5 135168146 135169489 + 2.19221019244939 NA intron (NM_009745, intron 1 of 5) CpG 445 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-11 chr2 103271834 103272281 + 2.19184853030482 NA intron (NM_007914, intron 6 of 8) intron (NM_007914, intron 6 of 8) 31139 NM_007914 13661 Mm.10724 NM_007914 ENSMUSG00000012350 Ehf 9030625L19Rik|AU019492 ets homologous factor protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-4 chr16 73481390 73481793 + 2.19184853030482 NA Intergenic Intergenic 818442 NM_019413 19876 Mm.310772 NM_019413 ENSMUSG00000022883 Robo1 AW494633|AW742721|DUTT1|Gm310 roundabout guidance receptor 1 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-8 chr3 89647125 89647484 + 2.19184853030482 NA intron (NM_080466, intron 4 of 7) intron (NM_080466, intron 4 of 7) -67718 NM_001038587 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-20 chr8 61308901 61309108 + 2.19184853030482 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -20132 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-17 chr5 110801702 110802017 + 2.19184853030482 NA intron (NM_001347394, intron 3 of 27) intron (NM_001347394, intron 3 of 27) 8222 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-9 chr4 156234759 156235096 + 2.19184853030482 NA promoter-TSS (NM_198305) promoter-TSS (NM_198305) -70 NM_198305 231003 Mm.423038 NM_198305 ENSMUSG00000078485 Klhl17 AL022703|BC058738 kelch-like 17 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-6 chr19 56452424 56452689 + 2.19184853030482 NA Intergenic Intergenic -9081 NM_001164263 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-21 chr8 71463832 71464027 + 2.19184853030482 NA promoter-TSS (NM_022419) promoter-TSS (NM_022419) -272 NM_022419 64296 Mm.276383 NM_022419 ENSMUSG00000007950 Abhd8 0910001L24Rik|AB030191 abhydrolase domain containing 8 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-5 chr18 13970084 13970460 + 2.19184853030482 NA intron (NM_001360804, intron 2 of 7) CpG 2461 NM_001360804 225207 Mm.40325 NM_145492 ENSMUSG00000024420 Zfp521 B930086A16Rik|Evi3|Znf521 zinc finger protein 521 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-6 chr14 76516309 76516681 + 2.19184853030482 NA intron (NR_045660, intron 2 of 3) intron (NR_045660, intron 2 of 3) 4360 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-14 chr3 108084737 108085090 + 2.19184853030482 NA intron (NM_001289719, intron 2 of 18) intron (NM_001289719, intron 2 of 18) 489 NM_001346665 109674 Mm.274335 NM_028779 ENSMUSG00000027889 Ampd2 1200014F01Rik|AI552571|Ampd-2|m4521Dajl adenosine monophosphate deaminase 2 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482 chr12 5181462 5181828 + 2.19184853030482 NA intron (NM_001164493, intron 3 of 13) intron (NM_001164493, intron 3 of 13) 194037 NM_001164493 208439 Mm.388281 NM_001164493 ENSMUSG00000020627 Klhl29 A230106N14Rik|Gm68|Kbtbd9|mKIAA1921 kelch-like 29 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-3 chr13 104515068 104515638 + 2.19184853030482 NA Intergenic Intergenic 227518 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-8 chr15 97941094 97941350 + 2.19184853030482 NA Intergenic Intergenic -23007 NM_001356508 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-4 chr13 99157844 99158432 + 2.19184853030482 NA Intergenic Intergenic -26685 NM_001004149 238803 Mm.343207 NM_001004149 ENSMUSG00000050919 Zfp366 DC-SCRIPT|Znf366 zinc finger protein 366 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-12 chr3 58203688 58203887 + 2.19184853030482 NA Intergenic Intergenic -39980 NR_040538 67850 Mm.416968 NR_040538 ENSMUSG00000100666 1700007F19Rik - RIKEN cDNA 1700007F19 gene ncRNA unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-18 chr5 110838885 110839379 + 2.19184853030482 NA promoter-TSS (NM_016681) promoter-TSS (NM_016681) 645 NM_001359835 100900 Mm.200231 NM_153571 ENSMUSG00000043510 Hscb AI325508|AW049829|Hsc20 HscB iron-sulfur cluster co-chaperone protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482 chr11 18989481 18989765 + 2.19184853030482 NA intron (NM_010789, intron 6 of 11) intron (NM_010789, intron 6 of 11) 29346 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-22 chr8 86903356 86903722 + 2.19184853030482 NA Intergenic B3A|SINE|B2 -18281 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-15 chr3 126695671 126696027 + 2.19184853030482 NA intron (NM_001025438, intron 3 of 18) intron (NM_001025438, intron 3 of 18) 98898 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-9 chr19 5852281 5852632 + 2.19184853030482 NA 3' UTR (NM_026169, exon 11 of 11) 3' UTR (NM_026169, exon 11 of 11) -6976 NR_003513 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-5 chr14 69555465 69555929 + 2.19184853030482 NA promoter-TSS (NR_045091).2 promoter-TSS (NR_045091).2 296 NM_026174 67464 Mm.489765 NM_026174 ENSMUSG00000095463 Entpd4 1200014F22Rik|4930513O14Rik|A430102M06Rik|AI414893|Lysal1|mKIAA0392 ectonucleoside triphosphate diphosphohydrolase 4 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-11 chr9 14090306 14090630 + 2.19184853030482 NA Intergenic Intergenic -185833 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-10 chr19 40999117 40999696 + 2.19184853030482 NA Intergenic Intergenic -4871 NM_008528 17060 Mm.9749 NM_008528 ENSMUSG00000061132 Blnk BASH|Bca|Ly-57|Ly57|Lyw-57|SLP-65 B cell linker protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-10 chr7 98559117 98559389 + 2.19184853030482 NA Intergenic Intergenic 65031 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-2 chr12 35564468 35565064 + 2.19184853030482 NA Intergenic Intergenic -29777 NM_001314027 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-2 chr13 63089687 63089972 + 2.19184853030482 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) 124936 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-3 chr13 93978546 93978808 + 2.19184853030482 NA Intergenic Intergenic -79119 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-7 chr15 81421376 81421768 + 2.19184853030482 NA intron (NM_177310, intron 2 of 8) intron (NM_177310, intron 2 of 8) -13299 NM_021317 57755 Mm.440590 NM_021317 ENSMUSG00000047108 Dnajb7 4933424H20Rik|Dj5|mDj5 DnaJ heat shock protein family (Hsp40) member B7 protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-7 chr2 168103852 168104075 + 2.19184853030482 NA Intergenic Intergenic 22959 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-19 chr5 140521562 140521916 + 2.19184853030482 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 16130 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-13 chr3 101577196 101577591 + 2.19184853030482 NA intron (NM_144900, intron 21 of 22) intron (NM_144900, intron 21 of 22) 27314 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-23 chr8 91545995 91546282 + 2.19184853030482 NA intron (NM_011936, intron 8 of 8) intron (NM_011936, intron 8 of 8) 232613 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak1_22_5_1.66494578064834_3.41743539104533_2.19184853030482-16 chr5 12575945 12576455 + 2.19184853030482 NA intron (NM_028882, intron 16 of 17) intron (NM_028882, intron 16 of 17) 193034 NM_028882 108151 Mm.89313 NM_028882 ENSMUSG00000040254 Sema3d 4631426B19Rik sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D protein-coding unique_peak2_5_19_-1.99694248929562_3.32345685023955_2.19184853030482-12 chr9 122085107 122085336 + 2.19184853030482 NA Intergenic Intergenic -32045 NM_001164572 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_201_223_-0.444912002373435_7.58489892087089_2.1907940377706 chr11 78367793 78370451 + 2.1907940377706 NA intron (NM_008238, intron 3 of 8) intron (NM_008238, intron 3 of 8) 17486 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-2 chr11 96827344 96828016 + 2.18856368072691 NA exon (NM_001130450, exon 2 of 5) exon (NM_001130450, exon 2 of 5) 1822 NM_001130450 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-2 chr6 86850572 86851090 + 2.18856368072691 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 1314 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-2 chr10 127644159 127644511 + 2.18856368072691 NA intron (NM_009284, intron 1 of 21) intron (NM_009284, intron 1 of 21) 1349 NM_009284 20852 Mm.121721 NM_009284 ENSMUSG00000002147 Stat6 - signal transducer and activator of transcription 6 protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-3 chr15 66818346 66818647 + 2.18856368072691 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 13333 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691 chr1 183154264 183154973 + 2.18856368072691 NA intron (NM_001278219, intron 2 of 8) PB1|SINE|Alu -7061 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-6 chr19 36117658 36118145 + 2.18856368072691 NA exon (NM_013468, exon 4 of 9) exon (NM_013468, exon 4 of 9) 1943 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691 chr12 112952656 112953014 + 2.18856368072691 NA Intergenic Intergenic -10693 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691 chr11 96414037 96414526 + 2.18856368072691 NA Intergenic Intergenic 48523 NM_008266 15407 Mm.890 NM_008266 ENSMUSG00000018973 Hoxb1 Hox-2.9 homeobox B1 protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-7 chr6 140625898 140626458 + 2.18856368072691 NA promoter-TSS (NM_001309436) promoter-TSS (NM_001309436) -707 NM_001309436 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-8 chr6 135024431 135025141 + 2.18856368072691 NA Intergenic Intergenic 13174 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-5 chr3 135672892 135673221 + 2.18856368072691 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 18491 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-6 chr4 88763226 88763477 + 2.18856368072691 NA Intergenic Intergenic 2577 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645 predicted gene 13283 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-7 chr5 102063097 102063849 + 2.18856368072691 NA intron (NM_172882, intron 1 of 66) intron (NM_172882, intron 1 of 66) 6448 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-3 chr15 84856304 84856662 + 2.18856368072691 NA promoter-TSS (NM_001081166) promoter-TSS (NM_001081166) -354 NR_030731 271305 Mm.101022 NM_001081166 ENSMUSG00000016624 Phf21b A730032D07Rik PHD finger protein 21B protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-4 chr15 73617900 73618597 + 2.18856368072691 NA promoter-TSS (NM_001357747) promoter-TSS (NM_001357747) -924 NM_001357747 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding unique_peak1_37_12_1.26872373640406_4.33480158634312_2.18856368072691-4 chr18 15063215 15063672 + 2.18856368072691 NA exon (NM_001142731, exon 1 of 5) exon (NM_001142731, exon 1 of 5) 139 NM_001142731 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-5 chr18 61071322 61071713 + 2.18856368072691 NA intron (NM_008809, intron 10 of 22) intron (NM_008809, intron 10 of 22) 26367 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_36_12_1.23052102291635_4.31570022959927_2.18856368072691-8 chr7 100929248 100929863 + 2.18856368072691 NA exon (NM_001081116, exon 1 of 21) exon (NM_001081116, exon 1 of 21) 2606 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak2_13_31_-1.46124592663483_4.26937703668258_2.1885636807269 chr10 88345978 88346570 + 2.1885636807269 NA intron (NM_027878, intron 1 of 6) intron (NM_027878, intron 1 of 6) 10801 NM_027878 71712 Mm.35450 NM_027878 ENSMUSG00000020057 Dram1 1200002N14Rik|Dram DNA-damage regulated autophagy modulator 1 protein-coding unique_peak2_13_31_-1.46124592663483_4.26937703668258_2.1885636807269-2 chr15 3444979 3445435 + 2.1885636807269 NA intron (NM_001048178, intron 2 of 8) intron (NM_001048178, intron 2 of 8) 136635 NM_001286370 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding common_peak1_14_31_-1.36241247522763_4.31879376238619_2.1885636807269 chr1 72755588 72755795 + 2.1885636807269 NA Intergenic Intergenic 44431 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding unique_peak2_13_31_-1.46124592663483_4.26937703668258_2.1885636807269-3 chrX 12088486 12089157 + 2.1885636807269 NA intron (NM_001168321, intron 1 of 13) CpG -8268 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak2_14_31_-1.36241247522763_4.31879376238619_2.1885636807269-2 chr16 32058597 32059250 + 2.1885636807269 NA intron (NM_177326, intron 1 of 14) intron (NM_177326, intron 1 of 14) 20419 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding unique_peak2_14_31_-1.36241247522763_4.31879376238619_2.1885636807269 chr13 108715041 108715438 + 2.1885636807269 NA intron (NM_011056, intron 1 of 16) intron (NM_011056, intron 1 of 16) 61062 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding common_peak1_143_77_0.592199070663968_6.58150175419423_2.1869926348532 chr3 41564875 41565966 + 2.1869926348532 NA intron (NM_001130186, intron 1 of 10) CpG 540 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak2_143_77_0.592199070663968_6.58150175419423_2.1869926348532 chr4 139231594 139232549 + 2.1869926348532 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 37960 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_435_279_0.335301909036991_8.29693397146346_2.18683749606766 chr14 28504266 28508344 + 2.18683749606766 NA intron (NM_009524, intron 1 of 4) CpG 832 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_215_125_0.481156968253754_7.21785840762679_2.18652467807293 chr4 155234139 155236360 + 2.18652467807293 NA Intergenic Intergenic -12714 NM_001357191 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_370_233_0.362954426114097_8.05184193264045_2.18646119978984 chr4 155217650 155221609 + 2.18646119978984 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 2906 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_391_248_0.352191272578241_8.1360975683572_2.18574848886688 chr3 98381812 98384766 + 2.18574848886688 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 808 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_56_80_-0.789850946112023_5.94492452982861_2.18456516591729 chr11 101082650 101083433 + 2.18456516591729 NA exon (NM_001305982, exon 2 of 10) exon (NM_001305982, exon 2 of 10) 476 NR_155015 71743 Mm.182271 NM_027896 ENSMUSG00000001755 Coasy 1300003G02Rik|Dpck|Ppat|Ukr1 Coenzyme A synthase protein-coding common_peak1_171_95_0.547170070341788_6.85854753589205_2.1837988402354 chr11 60141101 60143105 + 2.1837988402354 NA intron (NM_001037764, intron 1 of 4) intron (NM_001037764, intron 1 of 4) 2021 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_78_103_-0.682872051865815_6.35900369220818_2.18371226368624 chr11 75588073 75588809 + 2.18371226368624 NA intron (NM_008850, intron 1 of 11) CpG 362 NM_008850 18738 Mm.3128 NM_008850 ENSMUSG00000017781 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-46 chr9 41518342 41518618 + 2.18192634393779 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) -12945 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-20 chr17 56028940 56029399 + 2.18192634393779 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 7468 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-34 chr6 31076678 31076866 + 2.18192634393779 NA Intergenic Intergenic -13679 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-29 chr3 8252760 8253181 + 2.18192634393779 NA Intergenic Intergenic 210128 NR_033512 620966 Mm.301719 NR_033512 Gm6194 1700003N22Rik|EG620966 transmembrane protein 189 pseudogene pseudo unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-32 chr3 145633973 145634201 + 2.18192634393779 NA Intergenic Intergenic 15898 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-31 chr5 144935475 144935881 + 2.18192634393779 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 30152 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-2 chr1 135742490 135742954 + 2.18192634393779 NA intron (NR_153810, intron 2 of 3) intron (NR_153810, intron 2 of 3) 13555 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-23 chr3 116551758 116551989 + 2.18192634393779 NA Intergenic Intergenic -11100 NM_027321 109245 Mm.216027 NM_027321 ENSMUSG00000027961 Lrrc39 2010005E21Rik|9430028I06Rik|Myomasp leucine rich repeat containing 39 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-14 chr13 12648989 12649336 + 2.18192634393779 NA intron (NR_003568, intron 1 of 6) intron (NR_003568, intron 1 of 6) 1233 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik G protein-coupled receptor 137B, pseudogene pseudo unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-17 chr17 56021079 56021323 + 2.18192634393779 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 12000 NM_026530 68047 Mm.358710 NM_026530 ENSMUSG00000003199 Mpnd E130307M08Rik MPN domain containing protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-7 chr10 122920792 122921007 + 2.18192634393779 NA 3' UTR (NM_176919, exon 9 of 9) 3' UTR (NM_176919, exon 9 of 9) 64825 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-44 chr8 4165597 4165913 + 2.18192634393779 NA promoter-TSS (NM_001039578) promoter-TSS (NM_001039578) -812 NM_001039578 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-25 chr3 132964862 132965189 + 2.18192634393779 NA Intergenic Intergenic -14734 NM_033525 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-21 chr17 83277245 83277575 + 2.18192634393779 NA Intergenic Intergenic 62127 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-17 chr15 36924773 36924972 + 2.18192634393779 NA Intergenic Intergenic 82530 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-38 chr6 17225171 17225495 + 2.18192634393779 NA Intergenic Intergenic 27226 NR_102304 319682 Mm.136046 NR_102304 ENSMUSG00000085171 D830026I12Rik - RIKEN cDNA D830026I12 gene ncRNA unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-2 chr13 70735455 70735776 + 2.18192634393779 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -97981 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-37 chr6 87334365 87334898 + 2.18192634393779 NA intron (NM_054041, intron 1 of 17) intron (NM_054041, intron 1 of 17) 1144 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-3 chr1 136226498 136226878 + 2.18192634393779 NA intron (NM_028872, intron 3 of 9) intron (NM_028872, intron 3 of 9) 7592 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-33 chr6 29031251 29031569 + 2.18192634393779 NA Intergenic Intergenic 8791 NR_029567 387237 NR_029567 ENSMUSG00000065469 Mir129-1 Mirn129-1|Mirn129b|miR-129b|mir-129-1 microRNA 129-1 ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-37 chr5 65434259 65434576 + 2.18192634393779 NA intron (NM_009466, intron 1 of 11) intron (NM_009466, intron 1 of 11) 1425 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-16 chr14 75787182 75787392 + 2.18192634393779 NA promoter-TSS (NM_026232) promoter-TSS (NM_026232) -250 NM_026232 67554 Mm.46067 NM_026232 ENSMUSG00000022003 Slc25a30 4933433D23Rik|AV025504|AV221431|AW319655|KMCP1 solute carrier family 25, member 30 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-16 chr17 5813730 5813952 + 2.18192634393779 NA Intergenic Intergenic 14351 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-26 chr2 132611608 132611927 + 2.18192634393779 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 13571 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-22 chr19 17024978 17025444 + 2.18192634393779 NA intron (NM_181348, intron 6 of 19) intron (NM_181348, intron 6 of 19) 69093 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-8 chr11 16880889 16881295 + 2.18192634393779 NA intron (NM_207655, intron 13 of 27) intron (NM_207655, intron 13 of 27) 70190 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779 chr1 155222048 155222356 + 2.18192634393779 NA Intergenic Intergenic 63499 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-11 chr11 83892494 83892836 + 2.18192634393779 NA intron (NM_009330, intron 6 of 8) intron (NM_009330, intron 6 of 8) 39705 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-30 chr3 90250673 90250884 + 2.18192634393779 NA intron (NM_013901, intron 3 of 3) intron (NM_013901, intron 3 of 3) 2586 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-43 chr7 126376933 126377155 + 2.18192634393779 NA exon (NM_023712, exon 1 of 12) exon (NM_023712, exon 1 of 12) 890 NM_023712 73658 Mm.11112 NM_023712 ENSMUSG00000030741 Spns1 2210013K02Rik|Spin1|Spinl spinster homolog 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-12 chr11 96824837 96825095 + 2.18192634393779 NA promoter-TSS (NM_001130454) promoter-TSS (NM_001130454) -839 NM_001130451 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-47 chr9 63660358 63660639 + 2.18192634393779 NA intron (NM_016769, intron 5 of 8) intron (NM_016769, intron 5 of 8) 57852 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-4 chr4 105575474 105575986 + 2.18192634393779 NA Intergenic Intergenic 418383 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-35 chr4 59626429 59626635 + 2.18192634393779 NA intron (NM_001015681, intron 1 of 3) CpG 321 NM_153158 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-5 chr10 82961747 82962065 + 2.18192634393779 NA Intergenic Intergenic -23591 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-35 chr6 49931438 49931809 + 2.18192634393779 NA Intergenic Intergenic 108913 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-41 chr7 44854700 44855053 + 2.18192634393779 NA 3' UTR (NM_001290695, exon 4 of 4) 3' UTR (NM_001290695, exon 4 of 4) -2270 NM_021549 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-7 chr7 133042318 133042729 + 2.18192634393779 NA intron (NM_009980, intron 2 of 10) intron (NM_009980, intron 2 of 10) -27276 NM_001170744 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-15 chr13 102958024 102958367 + 2.18192634393779 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 197940 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-19 chr15 99409649 99409970 + 2.18192634393779 NA 3' UTR (NM_026669, exon 10 of 10) 3' UTR (NM_026669, exon 10 of 10) 16590 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-23 chr19 55535399 55535782 + 2.18192634393779 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 166614 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-2 chr1 162218803 162219062 + 2.18192634393779 NA non-coding (NR_002870, exon 1 of 1) non-coding (NR_002870, exon 1 of 1) 1118 NR_029810 723821 NR_029810 ENSMUSG00000070126 Mir199a-2 Mirn199a-2|mir-199a-2 microRNA 199a-2 ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-32 chr6 24526956 24527219 + 2.18192634393779 NA intron (NM_026614, intron 2 of 4) CpG 439 NR_154219 68202 Mm.275780 NM_026614 ENSMUSG00000023089 Ndufa5 2900002J19Rik|CI-13kD-B NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-27 chr4 134675841 134676133 + 2.18192634393779 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 28303 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-6 chr10 80068586 80068900 + 2.18192634393779 NA exon (NM_183426, exon 10 of 32) exon (NM_183426, exon 10 of 32) 6696 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-18 chr18 53598737 53599166 + 2.18192634393779 NA Intergenic Intergenic -49200 NR_040349 100502945 Mm.376937 NR_040349 Gm19466 - predicted gene, 19466 ncRNA unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-3 chr2 25533772 25534065 + 2.18192634393779 NA intron (NM_009422, intron 4 of 10) B1_Mur1|SINE|Alu 13022 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-18 chr15 73405873 73406161 + 2.18192634393779 NA intron (NM_001358046, intron 1 of 34) intron (NM_001358046, intron 1 of 34) 17174 NM_007982 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-39 chr6 52824810 52825005 + 2.18192634393779 NA intron (NM_173406, intron 2 of 4) intron (NM_173406, intron 2 of 4) 84713 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-26 chr4 57556811 57557016 + 2.18192634393779 NA Intergenic Intergenic -11335 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-4 chr10 52380679 52381191 + 2.18192634393779 NA intron (NM_053187, intron 1 of 7) intron (NM_053187, intron 1 of 7) 1189 NM_053187 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-45 chr8 18690042 18690343 + 2.18192634393779 NA TTS (NM_007426) TTS (NM_007426) 51370 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-24 chr2 20559249 20559715 + 2.18192634393779 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 39969 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-38 chr7 19571770 19571972 + 2.18192634393779 NA intron (NM_027189, intron 1 of 1) intron (NM_027189, intron 1 of 1) 1472 NM_027189 69731 Mm.24540 NM_027189 ENSMUSG00000044709 Gemin7 2400008I04Rik|AI120175|AI461688 gem nuclear organelle associated protein 7 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-41 chr8 85026372 85026668 + 2.18192634393779 NA promoter-TSS (NM_026760) promoter-TSS (NM_026760) -313 NM_026760 68544 Mm.196005 NM_026760 ENSMUSG00000041203 Trir 1110002H14Rik|2310036O22Rik|AI854688 telomerase RNA component interacting RNase protein-coding common_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779 chr2 158071098 158071357 + 2.18192634393779 NA intron (NM_001291135, intron 7 of 7) intron (NM_001291135, intron 7 of 7) 20570 NR_040609 72340 Mm.443395 NR_040609 ENSMUSG00000100860 2010009K17Rik - RIKEN cDNA 2010009K17 gene ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-20 chr3 8990674 8990936 + 2.18192634393779 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 13399 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-6 chr7 101464867 101465201 + 2.18192634393779 NA intron (NR_152192, intron 3 of 31) intron (NR_152192, intron 3 of 31) 8972 NR_152194 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-14 chr13 96984061 96984342 + 2.18192634393779 NA Intergenic Intergenic 50161 NM_025585 66479 Mm.390629 NM_025585 ENSMUSG00000052075 1700029F12Rik - RIKEN cDNA 1700029F12 gene protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-40 chr7 28595027 28595296 + 2.18192634393779 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 3023 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-9 chr12 17738951 17739158 + 2.18192634393779 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 48245 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779 chr1 34129439 34129642 + 2.18192634393779 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 12181 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-3 chr1 168426438 168426812 + 2.18192634393779 NA intron (NM_183355, intron 2 of 8) intron (NM_183355, intron 2 of 8) 5544 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-44 chr8 126552874 126553253 + 2.18192634393779 NA Intergenic Intergenic 40373 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-13 chr13 37909821 37910082 + 2.18192634393779 NA intron (NM_001039188, intron 6 of 9) intron (NM_001039188, intron 6 of 9) 21080 NM_001177869 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-33 chr4 21879339 21879586 + 2.18192634393779 NA promoter-TSS (NM_172687) promoter-TSS (NM_172687) -184 NM_172687 230027 Mm.5662 NM_172687 ENSMUSG00000028247 Coq3 4732433J24|C77934 coenzyme Q3 methyltransferase protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-8 chr11 70874632 70874959 + 2.18192634393779 NA exon (NM_001291142, exon 2 of 17) exon (NM_001291142, exon 2 of 17) 30034 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-30 chr5 66606338 66606547 + 2.18192634393779 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 12375 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-13 chr11 115960622 115960866 + 2.18192634393779 NA intron (NM_020483, intron 6 of 10) intron (NM_020483, intron 6 of 10) -13981 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-11 chr12 82258621 82258943 + 2.18192634393779 NA intron (NM_001167983, intron 2 of 23) intron (NM_001167983, intron 2 of 23) -52567 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-25 chr2 104448761 104449253 + 2.18192634393779 NA intron (NM_010434, intron 2 of 15) intron (NM_010434, intron 2 of 15) -20067 NR_035432 100316678 NR_035432 ENSMUSG00000084516 Mir1902 Mirn1902|mmu-mir-1902 microRNA 1902 ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-42 chr8 92854765 92855037 + 2.18192634393779 NA promoter-TSS (NM_173014) promoter-TSS (NM_173014) -432 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-27 chr2 155850469 155850849 + 2.18192634393779 NA intron (NM_001355443, intron 9 of 9) intron (NM_001355443, intron 9 of 9) -15805 NM_027788 71405 Mm.260918 NM_027788 ENSMUSG00000074647 Fam83c 5530400B04Rik family with sequence similarity 83, member C protein-coding unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-5 chr5 13988700 13988938 + 2.18192634393779 NA Intergenic Intergenic -36457 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-34 chr4 45456385 45456673 + 2.18192634393779 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -47763 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-45 chr9 106682028 106682248 + 2.18192634393779 NA 5' UTR (NM_001286498, exon 3 of 6) 5' UTR (NM_001286498, exon 3 of 6) 3678 NM_011573 21767 Mm.22266 NM_011573 ENSMUSG00000040813 Tex264 TEG-264 testis expressed gene 264 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-15 chr14 46386892 46387144 + 2.18192634393779 NA intron (NM_001316360, intron 1 of 2) intron (NM_001316360, intron 1 of 2) 3651 NM_001316360 12159 Mm.6813 NM_007554 ENSMUSG00000021835 Bmp4 Bmp-4|Bmp2b|Bmp2b-1|Bmp2b1 bone morphogenetic protein 4 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-36 chr6 49978952 49979312 + 2.18192634393779 NA Intergenic Intergenic -131109 NM_019939 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-24 chr3 122243262 122243505 + 2.18192634393779 NA Intergenic Intergenic -2174 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779 chr1 87037459 87037799 + 2.18192634393779 NA intron (NM_001172157, intron 15 of 21) intron (NM_001172157, intron 15 of 21) 52299 NM_007433 11650 Mm.195224 NM_007433 ENSMUSG00000026246 Alppl2 Akp5|C77216|D1Ertd816e|EAP alkaline phosphatase, placental-like 2 protein-coding unique_peak2_4_17_-2.10611809932415_3.11686595178024_2.18192634393779-8 chr8 64669706 64669957 + 2.18192634393779 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 23278 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-12 chr12 110840648 110840844 + 2.18192634393779 NA promoter-TSS (NR_152102) promoter-TSS (NR_152102) 193 NM_011973 26448 Mm.140948 NM_011973 ENSMUSG00000056458 Mok RAGE1|Rage|Stk30 MOK protein kinase protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-22 chr3 95735172 95735498 + 2.18192634393779 NA promoter-TSS (NR_105981) promoter-TSS (NR_105981) -362 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-7 chr11 44067011 44067480 + 2.18192634393779 NA Intergenic Intergenic -166008 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-29 chr4 149869659 149869931 + 2.18192634393779 NA Intergenic Intergenic 85211 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-4 chr1 184057866 184058211 + 2.18192634393779 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 23657 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-19 chr19 44818448 44818711 + 2.18192634393779 NA intron (NM_011037, intron 7 of 9) intron (NM_011037, intron 7 of 9) 10173 NR_105831 102466645 NR_105831 ENSMUSG00000098952 Mir6405 Gm27349|mmu-mir-6405 microRNA 6405 ncRNA unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-10 chr12 45047504 45047833 + 2.18192634393779 NA intron (NM_144552, intron 1 of 5) intron (NM_144552, intron 1 of 5) 26815 NM_144552 217517 Mm.285400 NM_144552 ENSMUSG00000046314 Stxbp6 BC024598|C85317 syntaxin binding protein 6 (amisyn) protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-5 chr10 23797029 23797276 + 2.18192634393779 NA exon (NM_183116, exon 1 of 14) exon (NM_183116, exon 1 of 14) 166 NM_001358812 76306 Mm.294271 NM_183116 ENSMUSG00000037455 Slc18b1 1110021L09Rik solute carrier family 18, subfamily B, member 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-28 chr4 134765913 134766116 + 2.18192634393779 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 1990 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-36 chr4 130115354 130115662 + 2.18192634393779 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 7952 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-6 chr10 89526593 89526930 + 2.18192634393779 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 6861 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-40 chr8 18778231 18778503 + 2.18192634393779 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -36805 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-46 chrX 102115409 102115800 + 2.18192634393779 NA Intergenic Intergenic -3861 NM_027181 69713 Mm.371635 NM_027181 ENSMUSG00000079480 Pin4 2410002I22Rik|EPVH|Par14 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-28 chr2 166085746 166086114 + 2.18192634393779 NA intron (NM_001252579, intron 7 of 20) intron (NM_001252579, intron 7 of 20) 69355 NM_001355619 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-9 chr11 69412646 69412930 + 2.18192634393779 NA intron (NM_001017426, intron 1 of 22) intron (NM_001017426, intron 1 of 22) 887 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-42 chr7 79254054 79254315 + 2.18192634393779 NA Intergenic Intergenic -19082 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-31 chr3 145615808 145616073 + 2.18192634393779 NA Intergenic Intergenic 34045 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_19_4_1.72776884808431_3.18581251892952_2.18192634393779-10 chr11 76080805 76081056 + 2.18192634393779 NA intron (NM_026664, intron 15 of 21) intron (NM_026664, intron 15 of 21) -53148 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-43 chr8 125910883 125911194 + 2.18192634393779 NA exon (NM_145608, exon 1 of 10) exon (NM_145608, exon 1 of 10) 588 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-21 chr3 87115736 87115938 + 2.18192634393779 NA intron (NM_001170985, intron 2 of 15) intron (NM_001170985, intron 2 of 15) 58910 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak1_20_4_1.79766158070526_3.22075888523999_2.18192634393779-39 chr7 43410956 43411204 + 2.18192634393779 NA exon (NM_172900, exon 6 of 12) exon (NM_172900, exon 6 of 12) 2800 NM_172900 243958 Mm.24444 NM_172900 ENSMUSG00000030468 Siglecg 9830164H23|A630096C01Rik|Siglec-G|Siglec10|mSiglec-G sialic acid binding Ig-like lectin G protein-coding common_peak2_38_60_-0.924363560880318_5.46855555712273_2.18118381021477 chr15 102242992 102243611 + 2.18118381021477 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 3199 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_72_32_0.860021316207473_5.47440477746219_2.18118381021476 chr12 76837492 76838517 + 2.18118381021476 NA intron (NM_145927, intron 1 of 11) intron (NM_145927, intron 1 of 11) 537 NM_145927 110606 Mm.151174 NM_145927 ENSMUSG00000033373 Fntb 2010013E13Rik|AA409500 farnesyltransferase, CAAX box, beta protein-coding unique_peak1_55_22_1.00108215816167_5.02410303513785_2.18062287223157 chr1 150043441 150044333 + 2.18062287223157 NA Intergenic Intergenic 55987 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA common_peak1_55_22_1.00108215816167_5.02410303513785_2.18062287223157 chr1 40179257 40180136 + 2.18062287223157 NA Intergenic Intergenic -45384 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_55_22_1.00108215816167_5.02410303513785_2.18062287223157-2 chr18 50055391 50056213 + 2.18062287223157 NA intron (NM_134131, intron 1 of 1) intron (NM_134131, intron 1 of 1) -2140 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak1_55_22_1.00108215816167_5.02410303513785_2.18062287223157-2 chr15 83411496 83412002 + 2.18062287223157 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 21101 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_55_22_1.00108215816167_5.02410303513785_2.18062287223157 chr3 145988059 145988371 + 2.18062287223157 NA exon (NM_001166064, exon 1 of 7) exon (NM_001166064, exon 1 of 7) 345 NM_001166064 214804 Mm.268854 NM_001166064 ENSMUSG00000036863 Syde2 C430017H16Rik synapse defective 1, Rho GTPase, homolog 2 (C. elegans) protein-coding common_peak2_26_46_-1.07498702120423_5.01709534107552_2.18062287223157 chr9 41517197 41518055 + 2.18062287223157 NA intron (NR_131930, intron 2 of 3) (TC)n|Simple_repeat|Simple_repeat -13799 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA common_peak1_108_54_0.697335171603786_6.13002729932655_2.18023963994701 chr6 90736306 90737516 + 2.18023963994701 NA intron (NM_001356440, intron 1 of 13) CpG -20382 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_65_89_-0.73184209150516_6.1259320505771_2.18023963994701 chr7 122067386 122068147 + 2.18023963994701 NA promoter-TSS (NM_026140) promoter-TSS (NM_026140) 568 NM_138589 28018 Mm.282122 NM_138589 ENSMUSG00000030870 Ubfd1 AI467302|D7Wsu105e|D7Wsu128e|Ubph ubiquitin family domain containing 1 protein-coding common_peak2_249_148_0.448677281297537_7.44350716111093_2.18019016905303 chr19 5447318 5449271 + 2.18019016905303 NA intron (NM_010235, intron 1 of 3) CpG 596 NM_010235 14283 Mm.6215 NM_010235 ENSMUSG00000024912 Fosl1 AW538199|Fra1|fra-1 fos-like antigen 1 protein-coding common_peak2_140_164_-0.518880288289551_7.10688207010104_2.17946879306892 chr15 98092707 98093880 + 2.17946879306892 NA 5' UTR (NM_144851, exon 1 of 18) 5' UTR (NM_144851, exon 1 of 18) 276 NM_144851 223870 Mm.384023 NM_144851 ENSMUSG00000033075 Senp1 2310046A20Rik|D15Ertd528e|E330036L07Rik|suPr-2 SUMO1/sentrin specific peptidase 1 protein-coding common_peak2_128_152_-0.537364689829009_6.98870549777815_2.17802795511337 chr8 126614486 126615006 + 2.17802795511337 NA Intergenic Intergenic -21310 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_167_190_-0.479004091162857_7.33792678245432_2.17462533933749 chr19 5636901 5638503 + 2.17462533933749 NA 5' UTR (NM_009045, exon 1 of 11) 5' UTR (NM_009045, exon 1 of 11) 212 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak1_217_126_0.482955218783036_7.23016229616368_2.17395907650458 chr8 105297123 105298849 + 2.17395907650458 NA intron (NM_148952, intron 1 of 9) intron (NM_148952, intron 1 of 9) 323 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding common_peak2_42_64_-0.876125282819022_5.58430517161894_2.17301518846909-2 chr6 66910583 66911375 + 2.17301518846909 NA intron (NM_001177558, intron 1 of 4) intron (NM_001177558, intron 1 of 4) 14088 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding unique_peak2_42_64_-0.876125282819022_5.58430517161894_2.17301518846909 chr7 99429025 99430196 + 2.17301518846909 NA intron (NM_001362168, intron 4 of 17) intron (NM_001362168, intron 4 of 17) -36394 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak2_42_64_-0.876125282819022_5.58430517161894_2.17301518846909-3 chrX 103481830 103482642 + 2.17301518846909 NA non-coding (NR_001570, exon 1 of 8) non-coding (NR_001570, exon 1 of 8) 997 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA common_peak2_42_64_-0.876125282819022_5.58430517161894_2.17301518846909 chr5 92309236 92310017 + 2.17301518846909 NA intron (NM_172713, intron 1 of 21) CpG 398 NM_172713 231452 Mm.86564 NM_172713 ENSMUSG00000029415 Sdad1 4931421J16|AA591032|AW538460 SDA1 domain containing 1 protein-coding common_peak2_77_35_0.829393795667012_5.58462189927582_2.17301518846908 chr12 86789767 86790409 + 2.17301518846908 NA Intergenic Intergenic 55719 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-13 chr7 126630703 126631235 + 2.17218792383888 NA Intergenic Intergenic -5499 NM_019738 56312 Mm.18742 NM_019738 ENSMUSG00000030717 Nupr1 2310032H04Rik|Com1|p8 nuclear protein transcription regulator 1 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-6 chr15 80650788 80651288 + 2.17218792383888 NA 3' UTR (NM_001289442, exon 8 of 8) 3' UTR (NM_001289442, exon 8 of 8) 4965 NR_105922 102466773 NR_105922 ENSMUSG00000098631 Mir6957 Gm27895|mmu-mir-6957 microRNA 6957 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-15 chr8 13647690 13648027 + 2.17218792383888 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 29729 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-2 chr10 12875147 12875415 + 2.17218792383888 NA Intergenic Intergenic -13546 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-2 chr6 87672576 87673040 + 2.17218792383888 NA promoter-TSS (NM_001170489) promoter-TSS (NM_001170489) -640 NM_001170489 72103 Mm.31770 NM_024251 ENSMUSG00000030051 Aplf 2010301N04Rik|AI452191 aprataxin and PNKP like factor protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-3 chr12 27940725 27941100 + 2.17218792383888 NA Intergenic Intergenic -598194 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-12 chr3 30999364 30999756 + 2.17218792383888 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 3789 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-8 chr18 60909733 60910454 + 2.17218792383888 NA Intergenic Intergenic -2147 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-16 chr8 71281228 71281713 + 2.17218792383888 NA intron (NM_001142322, intron 1 of 39) intron (NM_001142322, intron 1 of 39) 8756 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-15 chrX 151096196 151096599 + 2.17218792383888 NA intron (NM_175146, intron 1 of 4) CpG 146 NM_001164578 69499 Mm.8142 NM_175146 ENSMUSG00000025264 Tsr2 2310007F12Rik TSR2 20S rRNA accumulation protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-3 chr17 13478575 13478780 + 2.17218792383888 NA Intergenic Intergenic -42779 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888 chr1 75248616 75248890 + 2.17218792383888 NA exon (NM_008985, exon 20 of 23) exon (NM_008985, exon 20 of 23) 12051 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-4 chr15 11794293 11794765 + 2.17218792383888 NA Intergenic Intergenic 111145 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-13 chr3 52673878 52674441 + 2.17218792383888 NA Intergenic Intergenic -65565 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888 chr12 20920475 20921071 + 2.17218792383888 NA Intergenic CpG -104994 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888 chr12 112798256 112798649 + 2.17218792383888 NA Intergenic Intergenic -10523 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-17 chr8 104110432 104110863 + 2.17218792383888 NA intron (NM_009868, intron 1 of 11) intron (NM_009868, intron 1 of 11) -4774 NR_131138 546096 Mm.252264 NR_131138 ENSMUSG00000110053 Gm29682 Gm45664 predicted gene, 29682 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-10 chr2 173252465 173252738 + 2.17218792383888 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 23932 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-12 chr6 99436309 99436875 + 2.17218792383888 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -1247 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-5 chr15 76068844 76069278 + 2.17218792383888 NA intron (NM_001310542, intron 1 of 36) intron (NM_001310542, intron 1 of 36) 723 NM_134089 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-18 chr8 124277473 124277726 + 2.17218792383888 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 46205 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-11 chr3 19163548 19164011 + 2.17218792383888 NA promoter-TSS (NM_028840) promoter-TSS (NM_028840) -684 NM_001357689 74252 Mm.200383 NM_028840 ENSMUSG00000027599 Armc1 2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik armadillo repeat containing 1 protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-8 chr2 20898885 20899473 + 2.17218792383888 NA intron (NM_001128084, intron 3 of 24) intron (NM_001128084, intron 3 of 24) 68542 NM_001081364 71435 Mm.28507 NM_001081364 ENSMUSG00000036591 Arhgap21 5530401C11Rik|AA416458|ARHGAP10 Rho GTPase activating protein 21 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-11 chr5 136458867 136459171 + 2.17218792383888 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -83216 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-5 chr18 57433745 57434118 + 2.17218792383888 NA Intergenic Intergenic 28516 NR_152223 100503007 Mm.238087 NR_152223 Gm19500 - predicted gene, 19500 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-9 chr2 71055164 71055556 + 2.17218792383888 NA promoter-TSS (NM_001165982) promoter-TSS (NM_001165982) 246 NM_145524 228019 Mm.490343 NM_145524 ENSMUSG00000041975 Mettl8 BC004636|Tip methyltransferase like 8 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-14 chr9 62550891 62551311 + 2.17218792383888 NA Intergenic Intergenic -14057 NM_175484 235431 Mm.335229 NM_175484 ENSMUSG00000041729 Coro2b CLIPINC|E130012P22Rik coronin, actin binding protein, 2B protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-2 chr15 63412489 63413023 + 2.17218792383888 NA Intergenic Intergenic 66852 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-6 chr18 68242211 68243027 + 2.17218792383888 NA intron (NM_001357444, intron 2 of 3) intron (NM_001357444, intron 2 of 3) 14673 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-7 chr17 57274999 57275503 + 2.17218792383888 NA Intergenic CpG -3849 NM_001163816 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak2_10_26_-1.56160214041992_3.97408643195351_2.17218792383888 chr1 160057434 160057758 + 2.17218792383888 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 13216 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-9 chr3 86113086 86113370 + 2.17218792383888 NA intron (NM_001082414, intron 8 of 14) intron (NM_001082414, intron 8 of 14) 25630 NR_004417 19870 NR_004417 ENSMUSG00000064984 Snord73a Rnu73a|U73a small nucleolar RNA, C/D box U73A snoRNA common_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888 chr15 55120791 55121107 + 2.17218792383888 NA intron (NM_145470, intron 1 of 8) intron (NM_145470, intron 1 of 8) -7367 NR_045093 100503794 Mm.360519 NR_045093 ENSMUSG00000053749 Gm9920 - predicted gene 9920 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-7 chr19 10112224 10112689 + 2.17218792383888 NA Intergenic RSINE1|SINE|B4 -10953 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak1_30_9_1.35557642423866_3.99971630700669_2.17218792383888-10 chr4 154022208 154022478 + 2.17218792383888 NA TTS (NM_201226) TTS (NM_201226) 3701 NM_001163722 68859 Mm.477488 NM_001033144 ENSMUSG00000078350 Smim1 0610011H04Rik|1190007F08Rik|2700009I11Rik small integral membrane protein 1 protein-coding unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-14 chr5 136466304 136466664 + 2.17218792383888 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -90681 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA unique_peak1_31_9_1.40105696975719_4.02245657976596_2.17218792383888-4 chr17 87226695 87227213 + 2.17218792383888 NA Intergenic Intergenic -32012 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak1_87_41_0.779803000245055_5.78221892290129_2.17163326062792 chr11 74570665 74572148 + 2.17163326062792 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 18752 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_82_38_0.802921402028669_5.68686291987658_2.17017055344324 chr15 83157859 83158809 + 2.17017055344324 NA intron (NM_029787, intron 8 of 8) intron (NM_029787, intron 8 of 8) 8689 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA unique_peak2_45_68_-0.865671154981914_5.67568887928721_2.17017055344324 chr19 45015764 45016605 + 2.17017055344324 NA intron (NM_145503, intron 1 of 4) intron (NM_145503, intron 1 of 4) 974 NM_001130525 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak2_63_27_0.908575163013704_5.26164250356446_2.16967341056149 chr17 86166524 86167069 + 2.16967341056149 NA promoter-TSS (NM_011104) promoter-TSS (NM_011104) -989 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding common_peak1_64_27_0.930785171578144_5.27274750784668_2.16967341056149-3 chr19 40467881 40468882 + 2.16967341056149 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -16983 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_63_27_0.908575163013704_5.26164250356446_2.16967341056149 chr1 74031631 74032358 + 2.16967341056149 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 92453 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_64_27_0.930785171578144_5.27274750784668_2.16967341056149-2 chr18 35837393 35838106 + 2.16967341056149 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 7435 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_63_27_0.908575163013704_5.26164250356446_2.16967341056149 chr18 5333801 5334312 + 2.16967341056149 NA intron (NM_001360447, intron 1 of 4) intron (NM_001360447, intron 1 of 4) 383 NM_178722 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding common_peak1_64_27_0.930785171578144_5.27274750784668_2.16967341056149 chr14 28510240 28511288 + 2.16967341056149 NA promoter-TSS (NM_001256224) promoter-TSS (NM_001256224) -641 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak2_182_204_-0.45854340754836_7.45020839573127_2.16945561146004 chr1 151344597 151346719 + 2.16945561146004 NA intron (NM_001039511, intron 1 of 7) intron (NM_001039511, intron 1 of 7) 1160 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_51_20_1.02616577210311_4.90540030883031_2.16720861012098 chr13 51792765 51793499 + 2.16720861012098 NA intron (NM_013660, intron 1 of 15) CpG 615 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_51_20_1.02616577210311_4.90540030883031_2.16720861012098-2 chr8 49282850 49283171 + 2.16720861012098 NA Intergenic Intergenic -608320 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak2_23_43_-1.14855597219205_4.88515363254127_2.16720861012097 chr17 78200890 78201415 + 2.16720861012097 NA intron (NM_015800, intron 1 of 16) CpG 904 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889-2 chr3 53016787 53017154 + 2.16696607243889 NA intron (NM_026225, intron 1 of 18) CpG 253 NM_026225 67542 Mm.249548 NM_026225 ENSMUSG00000027742 Cog6 4933405E16Rik|AU018618|mKIAA1134 component of oligomeric golgi complex 6 protein-coding unique_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889-3 chr8 61193953 61194469 + 2.16696607243889 NA Intergenic Intergenic -29960 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak2_40_14_1.17112395156516_4.4924525713911_2.16696607243889-2 chr6 120463350 120463662 + 2.16696607243889 NA intron (NM_008359, intron 1 of 12) CpG 309 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding unique_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889-4 chr9 74954087 74954925 + 2.16696607243889 NA intron (NR_153342, intron 2 of 12) intron (NR_153342, intron 2 of 12) 1453 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_40_14_1.17112395156516_4.4924525713911_2.16696607243889 chr14 46635094 46635409 + 2.16696607243889 NA intron (NR_046460, intron 1 of 4) intron (NR_046460, intron 1 of 4) 2172 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA unique_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889-5 chrX 133601495 133601858 + 2.16696607243889 NA intron (NM_001105245, intron 5 of 5) intron (NM_001105245, intron 5 of 5) -86104 NR_153117 102632590 Mm.403836 NR_153117 ENSMUSG00000096978 Gm26851 - predicted gene, 26851 ncRNA common_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889 chr11 118160202 118160675 + 2.16696607243889 NA Intergenic Intergenic -31219 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding unique_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889-2 chr7 141524693 141525400 + 2.16696607243889 NA intron (NM_026522, intron 7 of 10) intron (NM_026522, intron 7 of 10) 14811 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding unique_peak1_40_14_1.17112395156516_4.4924525713911_2.16696607243889 chr11 54223522 54224191 + 2.16696607243889 NA Intergenic Intergenic -10568 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA unique_peak2_16_34_-1.31239718003527_4.47308442692733_2.16696607243888 chr14 19584542 19585141 + 2.16696607243888 NA Intergenic CpG 17746 NM_001024706 432825 Mm.327147 NM_001024706 ENSMUSG00000095024 Gm5458 EG432825 predicted gene 5458 protein-coding unique_peak2_16_34_-1.31239718003527_4.47308442692733_2.16696607243888-2 chr2 92182863 92183353 + 2.16696607243888 NA Intergenic Intergenic -1074 NM_138755 192285 Mm.330408 NM_138755 ENSMUSG00000058318 Phf21a 80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1 PHD finger protein 21A protein-coding unique_peak2_16_34_-1.31239718003527_4.47308442692733_2.16696607243888-3 chr9 21509955 21510433 + 2.16696607243888 NA promoter-TSS (NM_001324510) promoter-TSS (NM_001324510) 40 NM_010744 17083 Mm.196618 NM_010744 ENSMUSG00000032180 Tmed1 Il1rl1l|Ly84l|St2l transmembrane p24 trafficking protein 1 protein-coding common_peak2_16_34_-1.31239718003527_4.47308442692733_2.16696607243888-3 chr4 19575242 19575573 + 2.16696607243888 NA intron (NM_025476, intron 1 of 9) CpG 341 NM_025476 66302 Mm.440686 NM_025476 ENSMUSG00000028229 Rmdn1 Fam82b|RMD-1 regulator of microtubule dynamics 1 protein-coding common_peak1_16_34_-1.31239718003527_4.47308442692733_2.16696607243888 chrX 105928943 105929212 + 2.16696607243888 NA intron (NM_009530, intron 1 of 34) CpG 295 NM_009530 22589 Mm.10141 NM_009530 ENSMUSG00000031229 Atrx 4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX ATRX, chromatin remodeler protein-coding common_peak2_16_34_-1.31239718003527_4.47308442692733_2.16696607243888-2 chr17 22739485 22739824 + 2.16696607243888 NA Intergenic Intergenic 65256 NM_001362121 100534296 Mm.390939 NM_001362121 Gm9805 - predicted gene 9805 protein-coding common_peak2_16_34_-1.31239718003527_4.47308442692733_2.16696607243888 chr11 120250110 120250564 + 2.16696607243888 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 17390 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_202_116_0.499152371794747_7.11994090548078_2.16596042953229 chr6 29432847 29434836 + 2.16596042953229 NA intron (NM_001081185, intron 1 of 47) intron (NM_001081185, intron 1 of 47) 585 NM_001311074 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding common_peak1_138_74_0.598158360887206_6.52789787093948_2.16329383137074 chr1 162215151 162216904 + 2.16329383137074 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -1596 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak2_89_114_-0.641176883091036_6.52490160939886_2.16329383137074 chr6 50378338 50379316 + 2.16329383137074 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 4010 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_133_70_0.624750918562461_6.46212257878591_2.16105775064169 chr8 61755604 61756805 + 2.16105775064169 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 3894 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_369_376_-0.328968012177075_8.39393670718013_2.16034671666856 chr16 24392366 24395672 + 2.16034671666856 NA promoter-TSS (NR_037954) promoter-TSS (NR_037954) -364 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA unique_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253-5 chr9 107707569 107708381 + 2.15925086250253 NA intron (NM_011349, intron 1 of 17) (TG)n|Simple_repeat|Simple_repeat -2384 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253-4 chr5 31154254 31154941 + 2.15925086250253 NA promoter-TSS (NM_008622) promoter-TSS (NM_008622) -346 NM_008622 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding common_peak1_48_18_1.08543062992247_4.79064282840482_2.15925086250253 chr10 96687522 96688358 + 2.15925086250253 NA Intergenic Intergenic 70939 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_21_40_-1.17132162244778_4.77189119339419_2.15925086250253 chr10 40302405 40302936 + 2.15925086250253 NA promoter-TSS (NM_007444) promoter-TSS (NM_007444) -482 NM_009665 11702 Mm.253533 NM_009665 ENSMUSG00000075232 Amd1 AdoMetDC|Amd-1|SAMDC|SAMDC 1|adoMetDC1 S-adenosylmethionine decarboxylase 1 protein-coding unique_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253-2 chr16 10837798 10838438 + 2.15925086250253 NA intron (NM_001162932, intron 1 of 1) intron (NM_001162932, intron 1 of 1) 3059 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding unique_peak2_21_40_-1.17132162244778_4.77189119339419_2.15925086250253-2 chr9 59640854 59641869 + 2.15925086250253 NA intron (NR_038074, intron 19 of 22) intron (NR_038074, intron 19 of 22) -15007 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak2_21_40_-1.17132162244778_4.77189119339419_2.15925086250253 chr3 132869478 132870008 + 2.15925086250253 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 8853 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253-2 chr14 44183324 44183844 + 2.15925086250253 NA Intergenic Intergenic -12213 NM_029131 74954 Mm.425904 NM_029131 ENSMUSG00000072595 4930503E14Rik - RIKEN cDNA 4930503E14 gene protein-coding common_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253 chr11 117830289 117830666 + 2.15925086250253 NA intron (NM_027827, intron 2 of 10) intron (NM_027827, intron 2 of 10) -4463 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding unique_peak1_48_18_1.08543062992247_4.79064282840482_2.15925086250253 chr11 51876717 51877308 + 2.15925086250253 NA Intergenic Intergenic -19382 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253 chr14 31194943 31195718 + 2.15925086250253 NA intron (NM_001347583, intron 3 of 13) intron (NM_001347583, intron 3 of 13) 11496 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding unique_peak1_47_18_1.05589315342842_4.7758740901578_2.15925086250253-3 chr2 129174627 129175358 + 2.15925086250253 NA Intergenic Intergenic 5681 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 - expressed sequence AI847159 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-71 chr4 139218240 139218445 + 2.15846853396659 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 24231 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-23 chr14 48212430 48212719 + 2.15846853396659 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 13858 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-28 chr9 72711628 72711949 + 2.15846853396659 NA intron (NM_010890, intron 8 of 28) intron (NM_010890, intron 8 of 28) 18490 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-35 chr18 56973873 56974139 + 2.15846853396659 NA intron (NM_029909, intron 1 of 4) intron (NM_029909, intron 1 of 4) 1373 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-12 chr14 27174833 27175069 + 2.15846853396659 NA intron (NM_001289686, intron 2 of 12) intron (NM_001289686, intron 2 of 12) 30958 NM_001289686 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-28 chr13 93772839 93773056 + 2.15846853396659 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) 1268 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-85 chr6 71907794 71908056 + 2.15846853396659 NA intron (NR_155285, intron 1 of 24) intron (NR_155285, intron 1 of 24) 837 NR_155285 69956 Mm.30256 NM_027275 ENSMUSG00000063884 Ptcd3 2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39 pentatricopeptide repeat domain 3 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-10 chr10 80557970 80558198 + 2.15846853396659 NA intron (NM_025852, intron 1 of 14) intron (NM_025852, intron 1 of 14) 3476 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-21 chr4 144983313 144983513 + 2.15846853396659 NA exon (NM_001276502, exon 67 of 69) exon (NM_001276502, exon 67 of 69) 90276 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-102 chr9 55125213 55125420 + 2.15846853396659 NA Intergenic Intergenic -24053 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-33 chr17 25241409 25241597 + 2.15846853396659 NA intron (NM_026676, intron 3 of 5) intron (NM_026676, intron 3 of 5) 1333 NM_026676 68327 Mm.180687 NM_026676 ENSMUSG00000015126 Tsr3 0610007P22Rik|1110014B11Rik|AL022759 TSR3 20S rRNA accumulation protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-46 chr19 4494584 4494943 + 2.15846853396659 NA Intergenic Intergenic 3820 NM_027237 69861 Mm.282978 NM_027237 ENSMUSG00000042041 2010003K11Rik - RIKEN cDNA 2010003K11 gene protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-78 chr9 44736505 44736703 + 2.15846853396659 NA Intergenic Intergenic -1406 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-54 chr2 115775837 115776128 + 2.15846853396659 NA intron (NM_207264, intron 10 of 10) intron (NM_207264, intron 10 of 10) 137257 NR_035476 100316703 NR_035476 ENSMUSG00000088606 Mir1951 mir-1951|mmu-mir-1951 microRNA 1951 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-95 chr8 44864937 44865162 + 2.15846853396659 NA Intergenic Intergenic -85159 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-15 chr4 82264120 82264417 + 2.15846853396659 NA Intergenic Intergenic -198378 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-2 chr12 28378474 28378718 + 2.15846853396659 NA Intergenic Intergenic 169741 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-6 chr1 184086319 184086563 + 2.15846853396659 NA Intergenic Intergenic 52060 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-59 chr6 51471929 51472186 + 2.15846853396659 NA intron (NM_001355002, intron 2 of 5) intron (NM_001355002, intron 2 of 5) 805 NM_001355002 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-27 chr9 55205619 55206015 + 2.15846853396659 NA intron (NM_001346658, intron 12 of 12) intron (NM_001346658, intron 12 of 12) -3118 NM_028049 71999 Mm.276429 NM_028049 ENSMUSG00000032309 Fbxo22 0610033L19Rik|1600016C16Rik F-box protein 22 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-6 chr1 135425275 135425529 + 2.15846853396659 NA intron (NR_151727, intron 1 of 24) intron (NR_151727, intron 1 of 24) 5089 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-31 chr14 28512380 28512733 + 2.15846853396659 NA intron (NM_001256224, intron 2 of 4) intron (NM_001256224, intron 2 of 4) 1151 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-42 chr2 57353453 57353711 + 2.15846853396659 NA intron (NM_010274, intron 9 of 16) intron (NM_010274, intron 9 of 16) 115200 NM_010274 14571 Mm.3711 NM_010274 ENSMUSG00000026827 Gpd2 AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38 glycerol phosphate dehydrogenase 2, mitochondrial protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-64 chr3 95650376 95650586 + 2.15846853396659 NA Intergenic ID_B1|SINE|B4 -8240 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-86 chr6 99478402 99478714 + 2.15846853396659 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 42435 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-61 chr6 115544227 115544508 + 2.15846853396659 NA promoter-TSS (NM_199033) promoter-TSS (NM_199033) -337 NM_199033 381802 Mm.291208 NM_199033 ENSMUSG00000042389 Tsen2 AU067695 tRNA splicing endonuclease subunit 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-42 chr18 55001661 55001934 + 2.15846853396659 NA Intergenic Intergenic -9206 NM_001360787 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-8 chr12 79352979 79353184 + 2.15846853396659 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 55730 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-19 chr17 80126046 80126344 + 2.15846853396659 NA Intergenic Intergenic -1276 NM_176963 319625 Mm.29098 NM_176963 ENSMUSG00000035473 Galm A530057M15Rik|AU015645|AU020959 galactose mutarotase protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-56 chr5 34188648 34188860 + 2.15846853396659 NA Intergenic Intergenic -1044 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-43 chr2 136918696 136918896 + 2.15846853396659 NA intron (NM_001355671, intron 2 of 6) intron (NM_001355671, intron 2 of 6) 19445 NM_001038641 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-22 chr12 105562372 105562625 + 2.15846853396659 NA promoter-TSS (NM_009747) promoter-TSS (NM_009747) -674 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-78 chr5 92859888 92860075 + 2.15846853396659 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -38012 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-69 chr4 101244046 101244259 + 2.15846853396659 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 21130 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-11 chr17 75464302 75464603 + 2.15846853396659 NA intron (NM_001166493, intron 1 of 16) intron (NM_001166493, intron 1 of 16) -1086 NM_001360103 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-13 chr11 6546194 6546397 + 2.15846853396659 NA promoter-TSS (NM_001190343) promoter-TSS (NM_001190343) -592 NM_146014 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-5 chr1 184036194 184036411 + 2.15846853396659 NA intron (NM_022019, intron 1 of 3) intron (NM_022019, intron 1 of 3) 1921 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-66 chr7 113038913 113039181 + 2.15846853396659 NA Intergenic Intergenic 85085 NM_175279 78748 Mm.349943 NM_175279 ENSMUSG00000098132 Rassf10 4632411J06Rik Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-10 chr1 189805913 189806160 + 2.15846853396659 NA intron (NM_008976, intron 3 of 18) intron (NM_008976, intron 3 of 18) 77768 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-20 chr11 114854975 114855195 + 2.15846853396659 NA intron (NM_147217, intron 1 of 3) intron (NM_147217, intron 1 of 3) 3055 NM_147217 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-24 chr13 40722187 40722405 + 2.15846853396659 NA intron (NM_001122948, intron 4 of 6) intron (NM_001122948, intron 4 of 6) -5512 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-65 chr4 40845426 40845662 + 2.15846853396659 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 4594 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-27 chr9 67574164 67574448 + 2.15846853396659 NA Intergenic Intergenic -14603 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-107 chrX 12080145 12080369 + 2.15846853396659 NA 5' UTR (NM_175046, exon 1 of 14) 5' UTR (NM_175046, exon 1 of 14) 296 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-23 chr13 4247419 4247784 + 2.15846853396659 NA intron (NM_001013785, intron 8 of 8) intron (NM_001013785, intron 8 of 8) -1134 NR_028405 111002 Mm.482672 NR_028405 Marcksl1-ps4 Gm16264|Mlp-rs4|Mrp-rs4 MARCKS-like 1, pseudogene 4 pseudo unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-13 chr2 180433779 180434015 + 2.15846853396659 NA Intergenic Intergenic -22348 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-7 chr1 135467326 135467527 + 2.15846853396659 NA intron (NM_173437, intron 9 of 28) intron (NM_173437, intron 9 of 28) -12743 NR_049188 100885827 NR_049188 ENSMUSG00000093515 Mir1231 Gm23720|mir-1231|mmu-mir-1231 microRNA 1231 ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-15 chr11 97783021 97783360 + 2.15846853396659 NA promoter-TSS (NM_022891) promoter-TSS (NM_022891) -751 NM_022891 65019 Mm.140380 NM_022891 ENSMUSG00000071415 Rpl23 2810009A01Rik ribosomal protein L23 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-13 chr11 29694959 29695276 + 2.15846853396659 NA intron (NM_194051, intron 1 of 8) intron (NM_194051, intron 1 of 8) 1343 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-88 chr7 4097793 4098164 + 2.15846853396659 NA intron (NR_033568, intron 5 of 8) intron (NR_033568, intron 5 of 8) -21552 NM_001109765 57776 Mm.29729 NM_021324 ENSMUSG00000030428 Ttyh1 4930459B04Rik|6330408P11Rik|TTY1|mTTY1|tty tweety family member 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-57 chr2 151978927 151979241 + 2.15846853396659 NA intron (NM_146127, intron 1 of 1) ID_B1|SINE|B4 1135 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-80 chrX 11748740 11749042 + 2.15846853396659 NA Intergenic Intergenic 331662 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-28 chr9 109969251 109969524 + 2.15846853396659 NA intron (NM_001205332, intron 1 of 17) intron (NM_001205332, intron 1 of 17) 37613 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-36 chr16 57748424 57748759 + 2.15846853396659 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 6146 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-9 chr10 77509389 77509680 + 2.15846853396659 NA intron (NM_133998, intron 2 of 5) intron (NM_133998, intron 2 of 5) 6279 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-47 chr19 6139467 6139709 + 2.15846853396659 NA intron (NM_019722, intron 1 of 4) B3|SINE|B2 1549 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-4 chr13 34600028 34600300 + 2.15846853396659 NA Intergenic Intergenic 52517 NM_025831 66895 Mm.28943 NM_025831 ENSMUSG00000021411 Pxdc1 1300014I06Rik PX domain containing 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-24 chr14 69252155 69252402 + 2.15846853396659 NA intron (NM_026331, intron 1 of 3) intron (NM_026331, intron 1 of 3) 32825 NM_026331 67712 Mm.293635 NM_026331 ENSMUSG00000034248 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mfrn|Mfrn1|Mscp|frascati|mitoferrin solute carrier family 25, member 37 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-51 chr4 96553155 96553357 + 2.15846853396659 NA exon (NM_010008, exon 1 of 9) exon (NM_010008, exon 1 of 9) 395 NM_010008 13110 Mm.98200 NM_010008 ENSMUSG00000052914 Cyp2j6 - cytochrome P450, family 2, subfamily j, polypeptide 6 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-96 chr8 80832423 80832652 + 2.15846853396659 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 47942 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-50 chr4 57639355 57639630 + 2.15846853396659 NA intron (NM_001304544, intron 2 of 8) intron (NM_001304544, intron 2 of 8) 71244 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-52 chr2 18055277 18055650 + 2.15846853396659 NA promoter-TSS (NR_149308) promoter-TSS (NR_149308) 226 NM_010804 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-45 chr3 79243546 79243785 + 2.15846853396659 NA intron (NR_045502, intron 1 of 2) intron (NR_045502, intron 1 of 2) 30746 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-17 chr4 129024547 129024851 + 2.15846853396659 NA Intergenic Intergenic 31475 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-24 chr8 34759108 34759341 + 2.15846853396659 NA Intergenic Intergenic -48386 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-25 chr14 75797570 75797822 + 2.15846853396659 NA Intergenic Intergenic -10659 NM_026232 67554 Mm.46067 NM_026232 ENSMUSG00000022003 Slc25a30 4933433D23Rik|AV025504|AV221431|AW319655|KMCP1 solute carrier family 25, member 30 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-47 chr4 14102058 14102324 + 2.15846853396659 NA Intergenic Intergenic 189118 NR_131155 100040030 Mm.366499 NR_131155 Gm2560 - predicted gene 2560 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-87 chr6 146673606 146673846 + 2.15846853396659 NA Intergenic Intergenic 16508 NR_046277 74925 Mm.386304 NR_046277 ENSMUSG00000085238 4930479D17Rik - RIKEN cDNA 4930479D17 gene ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-12 chr10 86107568 86107780 + 2.15846853396659 NA intron (NR_038024, intron 2 of 2) intron (NR_038024, intron 2 of 2) 11820 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-9 chr16 50062718 50062923 + 2.15846853396659 NA intron (NR_045935, intron 1 of 3) intron (NR_045935, intron 1 of 3) 10032 NR_045935 224180 Mm.146439 NM_175010 Gm4827 B130050K08|EG224180 predicted gene 4827 ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-10 chr16 78282997 78283251 + 2.15846853396659 NA Intergenic Intergenic -18547 NM_009988 13052 Mm.66222 NM_009988 ENSMUSG00000022865 Cxadr 2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR coxsackie virus and adenovirus receptor protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-37 chr19 18796390 18796679 + 2.15846853396659 NA exon (NM_153417, exon 11 of 39) exon (NM_153417, exon 11 of 39) 46551 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-104 chr9 61361199 61361393 + 2.15846853396659 NA Intergenic Intergenic -11070 NM_001083928 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-25 chr13 41653717 41653919 + 2.15846853396659 NA Intergenic G-rich|Low_complexity|Low_complexity 47602 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-48 chr19 36792172 36792440 + 2.15846853396659 NA Intergenic Intergenic -41926 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-106 chr9 96583268 96583525 + 2.15846853396659 NA intron (NM_053268, intron 5 of 23) intron (NM_053268, intron 5 of 23) 48107 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-20 chr13 97926413 97926643 + 2.15846853396659 NA intron (NM_012026, intron 35 of 35) MIR|SINE|MIR 175416 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-93 chr8 6806357 6806682 + 2.15846853396659 NA Intergenic Intergenic -1701232 NM_011388 20494 Mm.3500 NM_011388 ENSMUSG00000023073 Slc10a2 9130221J18Rik|AI605518|ASBT|IBAT|ISBT solute carrier family 10, member 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-4 chr1 113289564 113289752 + 2.15846853396659 NA Intergenic Intergenic -1424740 NM_001081316 319901 Mm.103468 NM_001081316 ENSMUSG00000038702 Dsel 9330132E09Rik|DS-epi2 dermatan sulfate epimerase-like protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-25 chr8 45332707 45332936 + 2.15846853396659 NA exon (NM_133969, exon 1 of 11) exon (NM_133969, exon 1 of 11) 375 NM_133969 102294 Mm.245297 NM_133969 ENSMUSG00000079057 Cyp4v3 AU043077|AW111961|Cyp4v2 cytochrome P450, family 4, subfamily v, polypeptide 3 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-8 chr10 13688210 13688433 + 2.15846853396659 NA intron (NM_025446, intron 4 of 5) intron (NM_025446, intron 4 of 5) -135179 NM_001347361 56535 Mm.282711 NM_019961 ENSMUSG00000019809 Pex3 1700014F15Rik|2810027F19Rik|2900010N04Rik peroxisomal biogenesis factor 3 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-58 chr6 34672127 34672363 + 2.15846853396659 NA intron (NM_001347100, intron 2 of 13) intron (NM_001347100, intron 2 of 13) -37199 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-30 chr14 25381994 25382195 + 2.15846853396659 NA Intergenic Intergenic -77091 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-16 chr11 51657536 51657747 + 2.15846853396659 NA TTS (NR_027958) TTS (NR_027958) -6568 NM_145974 212706 Mm.41760 NM_145974 ENSMUSG00000001053 N4bp3 C330016O10Rik NEDD4 binding protein 3 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-2 chr1 191183682 191183947 + 2.15846853396659 NA promoter-TSS (NM_007498) promoter-TSS (NM_007498) -481 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-3 chr12 71747694 71747947 + 2.15846853396659 NA Intergenic Intergenic -83248 NM_026102 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-34 chr17 66511190 66511517 + 2.15846853396659 NA intron (NM_024448, intron 1 of 5) intron (NM_024448, intron 1 of 5) 8317 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-80 chr5 93133533 93133749 + 2.15846853396659 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 40225 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-15 chr11 43547970 43548170 + 2.15846853396659 NA intron (NM_001045530, intron 2 of 5) intron (NM_001045530, intron 2 of 5) 19321 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-83 chrX 98890227 98890493 + 2.15846853396659 NA intron (NM_001313755, intron 1 of 23) intron (NM_001313755, intron 1 of 23) 665 NM_052976 94190 Mm.33536 NM_052976 ENSMUSG00000031214 Ophn1 C130037N19Rik|Wtgr oligophrenin 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-34 chr16 37791815 37792067 + 2.15846853396659 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 14886 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-50 chr19 59418485 59418694 + 2.15846853396659 NA Intergenic Intergenic 40046 NR_002863 329078 Mm.80382 NR_002863 ENSMUSG00000087095 Emx2os - Emx2 opposite strand/antisense transcript (non-protein coding) ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-21 chr13 104817994 104818224 + 2.15846853396659 NA intron (NM_026075, intron 1 of 4) intron (NM_026075, intron 1 of 4) 939 NR_135272 67288 Mm.125465 NM_026075 ENSMUSG00000021716 Srek1ip1 3110031B13Rik|AI462702|AV348305|AW121048|Sfrs12ip1|Srsf12ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-24 chr8 91381290 91381588 + 2.15846853396659 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 67914 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-62 chr3 85636511 85636716 + 2.15846853396659 NA intron (NM_144896, intron 9 of 12) intron (NM_144896, intron 9 of 12) 62484 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-14 chr14 76531593 76531792 + 2.15846853396659 NA Intergenic Intergenic -10837 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-70 chr4 138213133 138213475 + 2.15846853396659 NA Intergenic ID4|SINE|ID -3308 NM_001122896 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-26 chr13 60895199 60895427 + 2.15846853396659 NA TTS (NM_001145801) TTS (NM_001145801) 2134 NM_007797 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-72 chr4 152572707 152572916 + 2.15846853396659 NA Intergenic Intergenic 94669 NM_153424 260305 Mm.302496 NM_153424 ENSMUSG00000039577 Nphp4 4930564O18Rik|nmf192 nephronophthisis 4 (juvenile) homolog (human) protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-33 chr14 63020360 63020633 + 2.15846853396659 NA Intergenic Intergenic 8725 NM_001039121 654458 Mm.390737 NM_001039121 ENSMUSG00000075572 Defb43 BD-43|EG654458|mBD-43 defensin beta 43 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-49 chr19 41987394 41987653 + 2.15846853396659 NA intron (NM_145500, intron 1 of 2) L2b|LINE|L2 5760 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-60 chr2 180949645 180949870 + 2.15846853396659 NA intron (NM_001141933, intron 1 of 5) intron (NM_001141933, intron 1 of 5) 4942 NM_001141933 58237 Mm.40361 NM_021426 ENSMUSG00000027574 Nkain4 AB030182|C030019F02Rik Na+/K+ transporting ATPase interacting 4 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-22 chr6 34752385 34752693 + 2.15846853396659 NA intron (NM_145575, intron 3 of 11) intron (NM_145575, intron 3 of 11) -27893 NM_001289658 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-94 chr8 31987787 31988056 + 2.15846853396659 NA Intergenic Intergenic -69718 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-75 chr9 13500860 13501114 + 2.15846853396659 NA Intergenic Intergenic 69626 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-22 chr6 83013376 83013604 + 2.15846853396659 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 19981 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-11 chr13 32270381 32270645 + 2.15846853396659 NA intron (NM_146041, intron 1 of 10) intron (NM_146041, intron 1 of 10) 68031 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659 chr1 9699991 9700185 + 2.15846853396659 NA 5' UTR (NM_001290397, exon 1 of 15) 5' UTR (NM_001290397, exon 1 of 15) 121 NM_001290397 17864 Mm.479 NM_008651 ENSMUSG00000025912 Mybl1 A-myb|G1-419-6|repro9 myeloblastosis oncogene-like 1 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-4 chr10 96631887 96632117 + 2.15846853396659 NA Intergenic RSINE1|SINE|B4 15001 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-8 chr1 155045205 155045430 + 2.15846853396659 NA Intergenic Intergenic 37947 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-7 chr10 4265700 4265925 + 2.15846853396659 NA promoter-TSS (NM_031185) promoter-TSS (NM_031185) -517 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-55 chr2 127895970 127896259 + 2.15846853396659 NA intron (NM_028765, intron 8 of 17) intron (NM_028765, intron 8 of 17) 41486 NM_028765 74121 Mm.244835 NM_028765 ENSMUSG00000027380 Acoxl 1200014P05Rik|AV025673 acyl-Coenzyme A oxidase-like protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-38 chr16 85873693 85874032 + 2.15846853396659 NA intron (NM_011782, intron 3 of 7) intron (NM_011782, intron 3 of 7) 27263 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-23 chr8 11395978 11396177 + 2.15846853396659 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -81852 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-44 chr3 49910048 49910335 + 2.15846853396659 NA Intergenic Intergenic -152875 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-59 chr2 168491306 168491497 + 2.15846853396659 NA intron (NM_001291174, intron 9 of 10) intron (NM_001291174, intron 9 of 10) 98964 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-2 chr1 40402209 40402419 + 2.15846853396659 NA Intergenic Intergenic -27256 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-22 chr14 46144488 46144745 + 2.15846853396659 NA Intergenic Intergenic 60589 NR_002875 218963 Mm.282093 NR_002875 Gm1821 - ubiquitin pseudogene pseudo unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-53 chr5 20950133 20950533 + 2.15846853396659 NA promoter-TSS (NR_030699) promoter-TSS (NR_030699) -656 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-6 chr13 112506708 112506943 + 2.15846853396659 NA TTS (NM_010560) TTS (NM_010560) 42755 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-91 chr7 84129077 84129335 + 2.15846853396659 NA intron (NM_133722, intron 1 of 2) intron (NM_133722, intron 1 of 2) 22687 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-70 chr8 105301029 105301216 + 2.15846853396659 NA intron (NM_148952, intron 6 of 9) intron (NM_148952, intron 6 of 9) 3459 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-17 chr12 69456534 69456795 + 2.15846853396659 NA Intergenic Intergenic 18886 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-5 chr1 133941923 133942193 + 2.15846853396659 NA Intergenic Intergenic -20657 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-68 chr8 23041386 23041603 + 2.15846853396659 NA intron (NM_001277284, intron 1 of 42) intron (NM_001277284, intron 1 of 42) 6395 NM_001277284 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-26 chr8 68965376 68965598 + 2.15846853396659 NA Intergenic Intergenic 84932 NM_008509 16956 Mm.1514 NM_008509 ENSMUSG00000015568 Lpl - lipoprotein lipase protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-64 chr7 67460394 67460678 + 2.15846853396659 NA Intergenic Intergenic -87678 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-29 chr15 88819750 88820000 + 2.15846853396659 NA promoter-TSS (NM_145477) promoter-TSS (NM_145477) 229 NM_029720 76737 Mm.292567 NM_029720 ENSMUSG00000023272 Creld2 5730592L21Rik|C85758 cysteine-rich with EGF-like domains 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-65 chr7 89769145 89769337 + 2.15846853396659 NA intron (NM_181407, intron 3 of 13) intron (NM_181407, intron 3 of 13) 134388 NM_001162979 70884 Mm.252823 NM_001162979 ENSMUSG00000039391 Ccdc81 4921513D09Rik coiled-coil domain containing 81 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-69 chr8 71396319 71396557 + 2.15846853396659 NA promoter-TSS (NM_181418) promoter-TSS (NM_181418) -417 NM_026636 68251 Mm.21749 NM_026636 ENSMUSG00000031820 Babam1 5430437P03Rik|Merit40 BRISC and BRCA1 A complex member 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-11 chr10 26501251 26501535 + 2.15846853396659 NA Intergenic Intergenic -126174 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 L3MBTL3 histone methyl-lysine binding protein protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659 chr10 95112133 95112441 + 2.15846853396659 NA Intergenic Intergenic 33538 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-82 chr5 136588614 136588857 + 2.15846853396659 NA Intergenic Intergenic -21245 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-12 chr19 5739366 5739631 + 2.15846853396659 NA Intergenic Intergenic -1406 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-27 chr13 64380672 64381054 + 2.15846853396659 NA Intergenic B4|SINE|B4 -10343 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-68 chr4 94615040 94615236 + 2.15846853396659 NA intron (NM_026319, intron 1 of 19) intron (NM_026319, intron 1 of 19) 647 NM_026319 67694 Mm.240619 NM_026319 ENSMUSG00000028576 Ift74 1700029H06Rik|Ccdc2|Cmg1|b2b796Clo intraflagellar transport 74 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-74 chr8 125286424 125286641 + 2.15846853396659 NA Intergenic Intergenic 206301 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-9 chr1 162128148 162128429 + 2.15846853396659 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -89335 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-18 chr11 79412941 79413214 + 2.15846853396659 NA intron (NM_010897, intron 11 of 57) intron (NM_010897, intron 11 of 57) 70954 NR_045305 104522 Mm.436987 NR_045305 ENSMUSG00000091523 AU040972 AU040954 expressed sequence AU040972 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-32 chr14 33353017 33353257 + 2.15846853396659 NA intron (NM_153800, intron 5 of 10) intron (NM_153800, intron 5 of 10) 57887 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-41 chr17 83378703 83379020 + 2.15846853396659 NA intron (NM_001357886, intron 1 of 21) intron (NM_001357886, intron 1 of 21) 27930 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-49 chr4 47177695 47177916 + 2.15846853396659 NA Intergenic Intergenic -30207 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-39 chr19 55754618 55754808 + 2.15846853396659 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 12903 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-14 chr11 43683136 43683430 + 2.15846853396659 NA intron (NM_027557, intron 1 of 1) intron (NM_027557, intron 1 of 1) 1285 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-16 chr15 37435245 37435486 + 2.15846853396659 NA intron (NM_029113, intron 2 of 3) intron (NM_029113, intron 2 of 3) -2701 NR_045283 100503538 Mm.445166 NR_045283 ENSMUSG00000086992 Gm15941 - predicted gene 15941 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-89 chr7 16912485 16912860 + 2.15846853396659 NA Intergenic Intergenic 6182 NM_008967 19222 Mm.287572 NM_008967 ENSMUSG00000043017 Ptgir IP|PGI2 prostaglandin I receptor (IP) protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-3 chr1 69286083 69286275 + 2.15846853396659 NA Intergenic Intergenic -178120 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-16 chr11 116274597 116274815 + 2.15846853396659 NA promoter-TSS (NM_146032) promoter-TSS (NM_146032) -489 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-75 chr5 21527690 21527902 + 2.15846853396659 NA intron (NM_001199632, intron 12 of 20) intron (NM_001199632, intron 12 of 20) -15731 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-2 chr1 86447760 86447949 + 2.15846853396659 NA Intergenic Intergenic 21525 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-81 chrX 74282100 74282341 + 2.15846853396659 NA promoter-TSS (NM_001173547) promoter-TSS (NM_001173547) 113 NM_001172154 69537 Mm.20169 NM_027109 ENSMUSG00000019088 Dnase1l1 2310005K03Rik|AI324885|Dnase1ll|Dnasex|Dnl1ll|G4.8 deoxyribonuclease 1-like 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-108 chrX 136256065 136256419 + 2.15846853396659 NA Intergenic Intergenic 11162 NM_011712 22381 Mm.512 NM_011712 ENSMUSG00000042712 Tceal9 AL024233|Wbp5 transcription elongation factor A like 9 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-14 chr3 81164417 81164636 + 2.15846853396659 NA intron (NM_001357746, intron 3 of 6) intron (NM_001357746, intron 3 of 6) 128110 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-23 chr7 144032619 144032840 + 2.15846853396659 NA Intergenic Intergenic 23475 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-19 chr5 35020050 35020352 + 2.15846853396659 NA promoter-TSS (NR_037280) promoter-TSS (NR_037280) -848 NR_037280 100526557 NR_037280 ENSMUSG00000093097 Mir3097 mir-3097|mmu-mir-3097 microRNA 3097 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-99 chr8 123027935 123028217 + 2.15846853396659 NA intron (NM_001081379, intron 1 of 12) RSINE1|SINE|B4 14208 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-58 chr2 152104799 152105016 + 2.15846853396659 NA promoter-TSS (NM_029688) promoter-TSS (NM_029688) -617 NM_029688 76650 Mm.218639 NM_029688 ENSMUSG00000032802 Srxn1 1700127B04Rik|AI854065|AW488194|Npn3|Srx|Srx1|TX01 sulfiredoxin 1 homolog (S. cerevisiae) protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-52 chr4 154245178 154245393 + 2.15846853396659 NA intron (NM_001162977, intron 5 of 36) intron (NM_001162977, intron 5 of 36) 54610 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-7 chr14 16200891 16201182 + 2.15846853396659 NA Intergenic Intergenic 42295 NM_001359883 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-37 chr16 57753945 57754166 + 2.15846853396659 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 682 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-32 chr16 37687259 37687540 + 2.15846853396659 NA Intergenic Intergenic -33031 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-101 chr9 13544649 13544900 + 2.15846853396659 NA Intergenic Intergenic -75215 NM_001013813 270118 Mm.116898 NM_173776 ENSMUSG00000031925 Maml2 5930431H10|BC032967 mastermind like transcriptional coactivator 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-53 chr2 31099076 31099366 + 2.15846853396659 NA intron (NM_001355105, intron 2 of 15) intron (NM_001355105, intron 2 of 15) -2721 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-84 chr6 67108369 67108653 + 2.15846853396659 NA Intergenic Intergenic -71104 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-36 chr18 65698303 65698516 + 2.15846853396659 NA exon (NM_177028, exon 1 of 15) exon (NM_177028, exon 1 of 15) 141 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-29 chr13 97914137 97914324 + 2.15846853396659 NA intron (NM_012026, intron 35 of 35) intron (NM_012026, intron 35 of 35) 163118 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-18 chr4 137482525 137482858 + 2.15846853396659 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 13888 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659 chr16 30519083 30519275 + 2.15846853396659 NA intron (NM_001357415, intron 10 of 11) ID_B1|SINE|B4 31399 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-74 chr4 155488102 155488374 + 2.15846853396659 NA Intergenic Intergenic -3123 NM_001160017 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-41 chr2 31444998 31445235 + 2.15846853396659 NA Intergenic Intergenic -25154 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-73 chr8 124284758 124284957 + 2.15846853396659 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 53463 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-20 chr19 28794695 28794899 + 2.15846853396659 NA Intergenic Intergenic -40369 NM_009199 20510 Mm.246670 NM_009199 ENSMUSG00000024935 Slc1a1 D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-77 chr9 29410916 29411285 + 2.15846853396659 NA intron (NM_001357601, intron 1 of 7) intron (NM_001357601, intron 1 of 7) 1585 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-92 chr7 96705680 96705965 + 2.15846853396659 NA intron (NM_011858, intron 8 of 32) intron (NM_011858, intron 8 of 32) 95727 NR_045874 791381 Mm.402112 NR_045874 ENSMUSG00000053049 Gm15413 - predicted gene 15413 ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-8 chr15 10720865 10721186 + 2.15846853396659 NA non-coding (NR_045065, exon 4 of 4) non-coding (NR_045065, exon 4 of 4) 6125 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-20 chr5 90611146 90611518 + 2.15846853396659 NA intron (NM_001310656, intron 4 of 10) intron (NM_001310656, intron 4 of 10) 29195 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-62 chr7 29271891 29272164 + 2.15846853396659 NA intron (NM_011464, intron 1 of 6) intron (NM_011464, intron 1 of 6) 9950 NM_001082548 20733 Mm.295230 NM_011464 ENSMUSG00000074227 Spint2 AL024025|C76321|HAI-2 serine protease inhibitor, Kunitz type 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-17 chr11 69122890 69123110 + 2.15846853396659 NA 3' UTR (NM_033041, exon 4 of 4) 3' UTR (NM_033041, exon 4 of 4) 2547 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hes family bHLH transcription factor 7 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-100 chr8 124953251 124953494 + 2.15846853396659 NA Intergenic Intergenic -4118 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-3 chr10 23785567 23785793 + 2.15846853396659 NA promoter-TSS (NR_037680) promoter-TSS (NR_037680) 141 NR_037681 100529075 NR_037681 ENSMUSG00000080486 Snord100 MBII-429|Z51 small nucleolar RNA, C/D box 100 snoRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659 chr1 33673488 33673693 + 2.15846853396659 NA Intergenic Intergenic 3766 NR_033199 67503 Mm.87069 NM_026204 ENSMUSG00000103746 1700001G17Rik - RIKEN cDNA 1700001G17 gene ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-43 chr18 60520984 60521222 + 2.15846853396659 NA Intergenic Intergenic -5051 NM_026302 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-27 chr15 74952554 74952749 + 2.15846853396659 NA Intergenic Intergenic -2400 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-81 chr5 110802714 110802913 + 2.15846853396659 NA intron (NM_001347394, intron 3 of 27) intron (NM_001347394, intron 3 of 27) 7268 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-46 chr3 93496502 93496711 + 2.15846853396659 NA Intergenic Intergenic -23890 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-48 chr4 41197929 41198214 + 2.15846853396659 NA intron (NM_026872, intron 22 of 28) intron (NM_026872, intron 22 of 28) 62050 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659 chr1 153330656 153330913 + 2.15846853396659 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 2002 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-21 chr5 139075434 139075709 + 2.15846853396659 NA intron (NM_001359099, intron 4 of 10) intron (NM_001359099, intron 4 of 10) 54181 NM_008923 19085 Mm.306163 NM_008923 ENSMUSG00000025855 Prkar1b AI385716|RIbeta protein kinase, cAMP dependent regulatory, type I beta protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-79 chr5 93103033 93103256 + 2.15846853396659 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 9728 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-7 chr11 97477878 97478172 + 2.15846853396659 NA intron (NM_021493, intron 15 of 18) intron (NM_021493, intron 15 of 18) 22315 NM_001289118 100141474 Mm.482426 NM_001289118 ENSMUSG00000047988 4933428G20Rik - RIKEN cDNA 4933428G20 gene protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-13 chr14 30541678 30542032 + 2.15846853396659 NA Intergenic Intergenic -7276 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-35 chr16 57693856 57694084 + 2.15846853396659 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 60767 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-72 chr8 122037844 122038156 + 2.15846853396659 NA Intergenic Intergenic 59976 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-61 chr3 27984348 27984554 + 2.15846853396659 NA intron (NM_008875, intron 1 of 25) intron (NM_008875, intron 1 of 25) 280 NM_008875 18805 Mm.212039 NM_008875 ENSMUSG00000027695 Pld1 AA536939|C85393|Pld1a|Pld1b|mPLD1 phospholipase D1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-55 chr5 33346277 33346503 + 2.15846853396659 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 10818 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-51 chr2 5733623 5733826 + 2.15846853396659 NA Intergenic Intergenic -18962 NM_177343 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-17 chr15 102296527 102296755 + 2.15846853396659 NA intron (NM_001014976, intron 1 of 30) intron (NM_001014976, intron 1 of 30) 348 NM_001356312 105988 Mm.288324 NM_001014976 ENSMUSG00000058290 Espl1 AL024103|AU045071|Cerp|ESP1|PRCE|SSE extra spindle pole bodies 1, separase protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-6 chr10 98745659 98745925 + 2.15846853396659 NA Intergenic Intergenic -168850 NM_001359506 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-76 chr9 23485653 23485898 + 2.15846853396659 NA TTS (NM_028472) TTS (NM_028472) 262699 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-29 chrX 56651337 56651550 + 2.15846853396659 NA intron (NM_172780, intron 12 of 15) intron (NM_172780, intron 12 of 15) 41608 NM_172780 236794 Mm.17815 NM_172780 ENSMUSG00000060681 Slc9a6 3732426M05|6430520C02Rik|NHE6|mKIAA0267 solute carrier family 9 (sodium/hydrogen exchanger), member 6 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-73 chr4 155283599 155283899 + 2.15846853396659 NA intron (NM_001355178, intron 7 of 14) intron (NM_001355178, intron 7 of 14) 33783 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-12 chr10 120579218 120579444 + 2.15846853396659 NA Intergenic Intergenic -102862 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-40 chr2 20350804 20351087 + 2.15846853396659 NA intron (NM_001081006, intron 2 of 21) intron (NM_001081006, intron 2 of 21) 61032 NM_001081006 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-66 chr4 46702553 46702741 + 2.15846853396659 NA intron (NM_001081141, intron 13 of 18) intron (NM_001081141, intron 13 of 18) -52448 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-60 chr6 71995671 71995877 + 2.15846853396659 NA Intergenic B1_Mm|SINE|Alu 46754 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-19 chr13 45512357 45512582 + 2.15846853396659 NA intron (NM_025508, intron 1 of 8) intron (NM_025508, intron 1 of 8) 5025 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-30 chr15 93636086 93636319 + 2.15846853396659 NA Intergenic Intergenic -40311 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-10 chr12 80290995 80291198 + 2.15846853396659 NA Intergenic Intergenic -30715 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-90 chr7 49211114 49211302 + 2.15846853396659 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -34981 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-54 chr5 24452817 24453025 + 2.15846853396659 NA intron (NM_001359881, intron 1 of 15) intron (NM_001359881, intron 1 of 15) 744 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-56 chr2 145781415 145781728 + 2.15846853396659 NA Intergenic Intergenic -4545 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-28 chr15 81329714 81329950 + 2.15846853396659 NA intron (NM_011399, intron 4 of 8) intron (NM_011399, intron 4 of 8) 30933 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-76 chr5 35718059 35718298 + 2.15846853396659 NA intron (NM_001359895, intron 5 of 17) intron (NM_001359895, intron 5 of 17) 11098 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-39 chr16 86649201 86649439 + 2.15846853396659 NA Intergenic Intergenic 157193 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-4 chr1 182283092 182283344 + 2.15846853396659 NA promoter-TSS (NM_007853) promoter-TSS (NM_007853) -417 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-18 chr13 15539330 15539620 + 2.15846853396659 NA intron (NM_008130, intron 2 of 14) intron (NM_008130, intron 2 of 14) 75752 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-26 chr8 108751702 108751925 + 2.15846853396659 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 37169 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-5 chr13 93839842 93840073 + 2.15846853396659 NA intron (NM_009712, intron 4 of 7) intron (NM_009712, intron 4 of 7) 49180 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-63 chr7 66294551 66294812 + 2.15846853396659 NA intron (NM_146191, intron 15 of 33) intron (NM_146191, intron 15 of 33) 87043 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-67 chr7 144686687 144686879 + 2.15846853396659 NA intron (NM_178642, intron 1 of 25) intron (NM_178642, intron 1 of 25) 51809 NM_178642 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-44 chr18 60848712 60848934 + 2.15846853396659 NA exon (NM_001198984, exon 1 of 26) exon (NM_001198984, exon 1 of 26) 141 NM_011552 21453 Mm.486251 NM_011552 ENSMUSG00000024613 Tcof1 AA408847|AW209012|treacle treacle ribosome biogenesis factor 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-71 chr8 105327207 105327414 + 2.15846853396659 NA intron (NM_025486, intron 2 of 5) PB1D7|SINE|Alu 946 NM_025486 66320 Mm.29990 NM_025486 ENSMUSG00000014856 Tmem208 1700006C06Rik|2610030K20Rik|Hspc171 transmembrane protein 208 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-26 chr15 27356363 27356577 + 2.15846853396659 NA Intergenic Intergenic -110207 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-25 chr8 106890270 106890482 + 2.15846853396659 NA intron (NM_145412, intron 1 of 3) intron (NM_145412, intron 1 of 3) 3217 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-97 chr8 91377860 91378053 + 2.15846853396659 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 64431 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-19 chr11 101277144 101277365 + 2.15846853396659 NA TTS (NM_026618) TTS (NM_026618) 1694 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-9 chr12 80240050 80240368 + 2.15846853396659 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 20162 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-67 chr4 57728470 57728772 + 2.15846853396659 NA intron (NM_001304544, intron 5 of 8) intron (NM_001304544, intron 5 of 8) -116627 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-103 chr9 57246088 57246292 + 2.15846853396659 NA intron (NM_001014398, intron 6 of 12) intron (NM_001014398, intron 6 of 12) 9634 NM_001014398 541610 Mm.378036 NM_001014398 ENSMUSG00000070298 Trcg1 - taste receptor cell gene 1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-40 chr17 62783693 62783882 + 2.15846853396659 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 97530 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-105 chr9 70262565 70262787 + 2.15846853396659 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 55326 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-5 chr10 96800434 96800675 + 2.15846853396659 NA Intergenic Intergenic 183553 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_2_12_-2.36839913297611_2.51624015165304_2.15846853396659-16 chr4 126218549 126218798 + 2.15846853396659 NA Intergenic Intergenic -15963 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-77 chr5 91669307 91669526 + 2.15846853396659 NA Intergenic Intergenic 97884 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-11 chr10 81265898 81266118 + 2.15846853396659 NA intron (NM_025317, intron 1 of 2) intron (NM_025317, intron 1 of 2) 918 NM_025317 66047 Mm.43397 NM_025317 ENSMUSG00000034932 Mrpl54 0610008M19Rik|D10Sut1e mitochondrial ribosomal protein L54 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-18 chr16 30064515 30064720 + 2.15846853396659 NA promoter-TSS (NM_008235) promoter-TSS (NM_008235) -740 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-38 chr19 30943364 30943611 + 2.15846853396659 NA intron (NM_001013833, intron 4 of 17) intron (NM_001013833, intron 4 of 17) -12525 NR_033643 625995 Mm.454508 NR_033643 Gm6642 EG625995 ubiquitin-like 5 pseudogene pseudo unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-57 chr5 35002644 35002899 + 2.15846853396659 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 3693 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-45 chr18 69547221 69547410 + 2.15846853396659 NA intron (NM_001361128, intron 6 of 19) intron (NM_001361128, intron 6 of 19) 201155 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak2_3_12_-1.95628971477681_2.72229486075269_2.15846853396659-15 chr15 10864293 10864531 + 2.15846853396659 NA Intergenic Intergenic 35361 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-3 chr1 135412514 135412735 + 2.15846853396659 NA intron (NM_001357578, intron 5 of 24) intron (NM_001357578, intron 5 of 24) 17867 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-98 chr8 117181886 117182121 + 2.15846853396659 NA intron (NM_001081151, intron 1 of 10) intron (NM_001081151, intron 1 of 10) 23868 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-79 chr9 110696898 110697128 + 2.15846853396659 NA intron (NM_028312, intron 2 of 6) intron (NM_028312, intron 2 of 6) 40510 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-63 chr3 85814622 85814878 + 2.15846853396659 NA Intergenic Intergenic -68541 NM_172682 229488 Mm.119926 NM_172682 ENSMUSG00000051000 Fam160a1 9930021J17Rik family with sequence similarity 160, member A1 protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-21 chr12 33222591 33222828 + 2.15846853396659 NA intron (NM_028139, intron 3 of 3) intron (NM_028139, intron 3 of 3) 75023 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-31 chr16 21319854 21320101 + 2.15846853396659 NA Intergenic Intergenic 13379 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-83 chr6 17498049 17498270 + 2.15846853396659 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 34202 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_13_3_1.53875407336517_2.76937703668258_2.15846853396659-14 chr11 20897769 20898037 + 2.15846853396659 NA Intergenic Intergenic -66795 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding unique_peak1_14_3_1.63758752477237_2.81879376238619_2.15846853396659-82 chrX 94636164 94636553 + 2.15846853396659 NA exon (NM_008179, exon 1 of 1) exon (NM_008179, exon 1 of 1) 289 NM_008179 14853 Mm.20826 NM_008179 ENSMUSG00000071723 Gspt2 - G1 to S phase transition 2 protein-coding common_peak2_18_37_-1.27170907932519_4.61207297378099_2.15838218998677-2 chr4 129954159 129954809 + 2.15838218998677 NA Intergenic Intergenic -5890 NR_040647 72225 Mm.102193 NR_040647 1700003M07Rik - RIKEN cDNA 1700003M07 gene ncRNA common_peak2_18_37_-1.27170907932519_4.61207297378099_2.15838218998677 chr16 31608463 31608959 + 2.15838218998677 NA Intergenic Intergenic -9422 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak1_18_37_-1.27170907932519_4.61207297378099_2.15838218998677 chr10 76032673 76032957 + 2.15838218998677 NA intron (NM_177475, intron 1 of 1) CpG 203 NM_177475 64453 Mm.80609 NM_177475 ENSMUSG00000049764 Zfp280b D10Jhu82e|Suhw2 zinc finger protein 280B protein-coding common_peak1_44_16_1.12390530617624_4.64941549433846_2.15838218998676-4 chr9 44498181 44498740 + 2.15838218998676 NA promoter-TSS (NM_030256) promoter-TSS (NM_030256) -676 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak1_44_16_1.12390530617624_4.64941549433846_2.15838218998676 chr12 111677367 111677961 + 2.15838218998676 NA promoter-TSS (NM_001099792) promoter-TSS (NM_001099792) -441 NM_001099792 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding unique_peak1_44_16_1.12390530617624_4.64941549433846_2.15838218998676-2 chr13 114682066 114682729 + 2.15838218998676 NA intron (NR_045976, intron 3 of 6) intron (NR_045976, intron 3 of 6) 75169 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA common_peak1_44_16_1.12390530617624_4.64941549433846_2.15838218998676 chr13 13025055 13025723 + 2.15838218998676 NA Intergenic Intergenic -20059 NM_031191 18811 Mm.88796 NM_031191 ENSMUSG00000079092 Prl2c2 Ghd2|MRP-1|PLF-1|Plf|Plf1 prolactin family 2, subfamily c, member 2 protein-coding common_peak1_44_16_1.12390530617624_4.64941549433846_2.15838218998676-3 chr19 53793383 53793871 + 2.15838218998676 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) -98604 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_44_16_1.12390530617624_4.64941549433846_2.15838218998676-2 chr18 36516087 36516435 + 2.15838218998676 NA promoter-TSS (NM_010415) promoter-TSS (NM_010415) -456 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak2_152_83_0.572129659439357_6.67838225249844_2.15532871473892 chr4 150002279 150003746 + 2.15532871473892 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 224 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_101_125_-0.593668443509255_6.68044570174529_2.1553287147389 chr10 60826908 60828215 + 2.1553287147389 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 4020 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_100_125_-0.607782024242503_6.67338891137867_2.1553287147389 chr15 5514406 5515849 + 2.1553287147389 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 18809 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_98_48_0.72613676293676_5.97777822558359_2.15469273091327 chr19 46328102 46328776 + 2.15469273091327 NA 5' UTR (NM_133694, exon 1 of 4) 5' UTR (NM_133694, exon 1 of 4) 255 NM_133694 68431 Mm.19973 NM_133694 ENSMUSG00000025226 Fbxl15 0710008C12Rik|Fbxo37 F-box and leucine-rich repeat protein 15 protein-coding common_peak2_98_48_0.72613676293676_5.97777822558359_2.15469273091327 chr15 77152841 77153649 + 2.15469273091327 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 567 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_57_81_-0.782638983240817_5.96623251299768_2.15469273091327 chr5 112324881 112326107 + 2.15469273091327 NA promoter-TSS (NM_018783) promoter-TSS (NM_018783) -875 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_68_30_0.869492593636834_5.38894260720529_2.15096905553244-2 chr14 65837462 65838383 + 2.15096905553244 NA intron (NM_145944, intron 1 of 8) intron (NM_145944, intron 1 of 8) 620 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding common_peak1_68_30_0.869492593636834_5.38894260720529_2.15096905553244 chr1 137899433 137900140 + 2.15096905553244 NA Intergenic Intergenic -66669 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak1_69_30_0.890104702585684_5.39924866167972_2.15096905553244-2 chr19 38592724 38593285 + 2.15096905553244 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 68807 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak1_69_30_0.890104702585684_5.39924866167972_2.15096905553244 chr13 17992660 17993401 + 2.15096905553244 NA intron (NM_025904, intron 1 of 2) intron (NM_025904, intron 1 of 2) 321 NM_025904 67008 Mm.252918 NM_025904 ENSMUSG00000075054 Yae1d1 1600012F09Rik Yae1 domain containing 1 protein-coding common_peak2_35_57_-0.966269746454867_5.37484612190014_2.15096905553243 chr1 135862673 135863126 + 2.15096905553243 NA Intergenic Intergenic 22038 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak2_130_154_-0.534062096831847_7.00909335685831_2.14894166980446 chr8 122225817 122227415 + 2.14894166980446 NA Intergenic Intergenic -55525 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_60_25_0.946716351161784_5.17379789372198_2.14568534968695 chr3 109122367 109122969 + 2.14568534968695 NA promoter-TSS (NM_172685) promoter-TSS (NM_172685) -481 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_29_50_-1.04189279677237_5.15147894358531_2.14568534968695 chr4 138454807 138455291 + 2.14568534968695 NA promoter-TSS (NM_025451) promoter-TSS (NM_025451) -99 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_60_25_0.946716351161784_5.17379789372198_2.14568534968695-2 chr4 133369792 133370550 + 2.14568534968695 NA TTS (NR_039582) TTS (NR_039582) 395 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak2_71_95_-0.700306231621695_6.23480938491031_2.14546950842879 chr9 110131370 110132503 + 2.14546950842879 NA promoter-TSS (NM_009211) promoter-TSS (NM_009211) -88 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak2_115_59_0.660967446195503_6.23737431870627_2.14546950842878 chr8 3428838 3429855 + 2.14546950842878 NA intron (NM_133962, intron 3 of 19) intron (NM_133962, intron 3 of 19) 36338 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_115_59_0.660967446195503_6.23737431870627_2.14546950842878 chr15 13210651 13211564 + 2.14546950842878 NA Intergenic Intergenic -37432 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_93_45_0.743044367671797_5.89508413989291_2.14513908252199-3 chr2 27677410 27678457 + 2.14513908252199 NA intron (NM_011305, intron 1 of 9) intron (NM_011305, intron 1 of 9) 732 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_93_45_0.743044367671797_5.89508413989291_2.14513908252199 chr12 76547612 76549075 + 2.14513908252199 NA promoter-TSS (NR_046044) promoter-TSS (NR_046044) -418 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_93_45_0.743044367671797_5.89508413989291_2.14513908252199-2 chr17 46933430 46934482 + 2.14513908252199 NA intron (NM_146078, intron 45 of 46) intron (NM_146078, intron 45 of 46) 23471 NM_008938 19133 Mm.291370 NM_008938 ENSMUSG00000023978 Prph2 AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds peripherin 2 protein-coding common_peak1_90_115_-0.637838750671573_6.53906161979179_2.14339138582574 chr19 6061296 6062186 + 2.14339138582574 NA exon (NM_013859, exon 1 of 1) exon (NM_013859, exon 1 of 1) 534 NM_013859 29805 Mm.2310 NM_013859 ENSMUSG00000075227 Znhit2 C11orf5|Fon|ORF6|Znhit2-ps zinc finger, HIT domain containing 2 protein-coding common_peak2_90_115_-0.637838750671573_6.53906161979179_2.14339138582574 chr10 67284336 67285223 + 2.14339138582574 NA intron (NM_001036293, intron 1 of 3) CpG 502 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding common_peak1_368_232_0.361389647827824_8.04488096856819_2.14166480267126 chr8 89039686 89043345 + 2.14166480267126 NA intron (NM_021390, intron 2 of 3) CpG 2647 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding common_peak2_121_63_0.640101089729632_6.32005054486482_2.14079438662344 chr3 121687056 121688227 + 2.14079438662344 NA Intergenic Intergenic 16878 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_121_63_0.640101089729632_6.32005054486482_2.14079438662344 chr14 50924043 50925689 + 2.14079438662344 NA promoter-TSS (NM_133676) promoter-TSS (NM_133676) 27 NM_133676 66246 Mm.274791 NM_133676 ENSMUSG00000006289 Osgep 1500019L24Rik|GCPL-1|PRSMG1 O-sialoglycoprotein endopeptidase protein-coding common_peak1_113_137_-0.565580379578813_6.82573426698876_2.14015863027699 chr15 99725650 99726608 + 2.14015863027699 NA intron (NM_183256, intron 1 of 1) intron (NM_183256, intron 1 of 1) 511 NM_183256 66379 Mm.5265 NM_183256 ENSMUSG00000023020 Cox14 2310016M24Rik|AA959804 cytochrome c oxidase assembly protein 14 protein-coding common_peak2_39_61_-0.911554346988445_5.49841913689265_2.13991130133362 chr16 86347468 86348583 + 2.13991130133362 NA Intergenic Intergenic -446900 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_73_33_0.836442920233859_5.50568430136727_2.13991130133362 chr14 16249286 16249722 + 2.13991130133362 NA promoter-TSS (NM_001359882) promoter-TSS (NM_001359882) 190 NM_001362432 59007 Mm.258381 NM_021504 ENSMUSG00000021785 Ngly1 1110002C09Rik|PNGase|Png1 N-glycanase 1 protein-coding common_peak1_128_67_0.632560311613304_6.40374299705699_2.13918456506922 chr10 93422355 93423648 + 2.13918456506922 NA Intergenic Intergenic -10106 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA common_peak1_104_52_0.697216160636816_6.07652853488161_2.13889614987911-3 chr2 125211226 125212907 + 2.13889614987911 NA intron (NM_001079690, intron 21 of 27) intron (NM_001079690, intron 21 of 27) -35182 NM_001159646 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_104_52_0.697216160636816_6.07652853488161_2.13889614987911-2 chr19 16868869 16869675 + 2.13889614987911 NA Intergenic Intergenic 4558 NM_008023 14240 Mm.7971 NM_008023 ENSMUSG00000056829 Foxb2 Fkh4 forkhead box B2 protein-coding common_peak1_104_52_0.697216160636816_6.07652853488161_2.13889614987911 chr14 120477891 120479162 + 2.13889614987911 NA promoter-TSS (NM_029519) promoter-TSS (NM_029519) 65 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak2_50_73_-0.818786906065044_5.80005991259643_2.13826684186156 chr9 120127740 120128317 + 2.13826684186156 NA intron (NM_011029, intron 1 of 6) CpG 262 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding common_peak1_157_180_-0.489333200381173_7.25517928689262_2.13725206075851 chr9 63705206 63707284 + 2.13725206075851 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 51749 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_174_98_0.527546312073585_6.8931297761164_2.13636046550847 chr6 108305143 108307181 + 2.13636046550847 NA intron (NM_010585, intron 4 of 61) intron (NM_010585, intron 4 of 61) 93066 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_78_36_0.808114300646326_5.61351051595211_2.13485901508712 chr19 5049541 5050150 + 2.13485901508712 NA promoter-TSS (NM_145495) promoter-TSS (NM_145495) -963 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak1_78_36_0.808114300646326_5.61351051595211_2.13485901508712-2 chr3 54479583 54480279 + 2.13485901508712 NA Intergenic Intergenic 118824 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_125_149_-0.542503371822289_6.95756700458474_2.13464076409964 chr10 71156979 71158032 + 2.13464076409964 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 2185 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_125_149_-0.542503371822289_6.95756700458474_2.13464076409964 chr10 68239577 68241709 + 2.13464076409964 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 38083 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_46_69_-0.855621713642912_5.70147216012351_2.13461086968746 chr12 30911204 30912151 + 2.13461086968746 NA promoter-TSS (NM_013709) promoter-TSS (NM_013709) 8 NM_013709 24057 Mm.218624 NM_013709 ENSMUSG00000020669 Sh3yl1 AI314953|Ray|YSC84 Sh3 domain YSC-like 1 protein-coding common_peak1_83_39_0.783551621558773_5.71370390566675_2.13461086968746 chr8 108886883 108887619 + 2.13461086968746 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -49609 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak2_165_187_-0.473320210359963_7.31792874649766_2.13253708255943 chr7 127966717 127967959 + 2.13253708255943 NA promoter-TSS (NM_001347649) promoter-TSS (NM_001347649) -141 NM_001347649 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding common_peak1_108_132_-0.576587550372744_6.76698866031482_2.12943606356375 chr11 106255256 106256756 + 2.12943606356375 NA promoter-TSS (NM_008950) promoter-TSS (NM_008950) 78 NM_025310 56095 Mm.29795 NM_025310 ENSMUSG00000020706 Ftsj3 AA537063|AU045295|C79843|D11Ertd400e|Epcs3 FtsJ RNA methyltransferase homolog 3 (E. coli) protein-coding common_peak1_110_56_0.671851349546912_6.1688156889382_2.1280873638541 chr15 76192234 76192809 + 2.1280873638541 NA intron (NM_201394, intron 5 of 31) intron (NM_201394, intron 5 of 31) 3189 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_59_82_-0.751561865721039_5.99925849848641_2.12576351360238 chr13 42328876 42329572 + 2.12576351360238 NA Intergenic Intergenic 27748 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_99_49_0.711387692804339_5.99955003617689_2.12576351360237 chr1 192137824 192139106 + 2.12576351360237 NA promoter-TSS (NM_144814) promoter-TSS (NM_144814) -425 NM_001290282 214742 Mm.207457 NM_144814 ENSMUSG00000037395 Rcor3 4921514E24Rik|C730034D20Rik|E130101E15Rik REST corepressor 3 protein-coding common_peak1_99_49_0.711387692804339_5.99955003617689_2.12576351360237-2 chr9 58314748 58316192 + 2.12576351360237 NA Intergenic Intergenic -2258 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494-6 chr5 30963459 30963780 + 2.12469164491494 NA Intergenic Intergenic -3292 NM_016703 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding common_peak2_34_11_1.26639349182465_4.21815924663348_2.12469164491494 chr13 63748744 63749017 + 2.12469164491494 NA Intergenic Intergenic -14582 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494-3 chr14 76733353 76734000 + 2.12469164491494 NA Intergenic Intergenic -26455 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_12_29_-1.47429744158016_4.16974187481844_2.12469164491494-3 chr8 54577074 54577607 + 2.12469164491494 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) -23441 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak2_34_11_1.26639349182465_4.21815924663348_2.12469164491494-2 chr7 139208323 139208542 + 2.12469164491494 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) -4556 NM_027164 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding unique_peak2_12_29_-1.47429744158016_4.16974187481844_2.12469164491494-2 chr2 140105196 140105548 + 2.12469164491494 NA Intergenic Intergenic -38567 NR_110351 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494-5 chr19 6242564 6242922 + 2.12469164491494 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 1075 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding unique_peak2_12_29_-1.47429744158016_4.16974187481844_2.12469164491494 chr11 35950293 35950732 + 2.12469164491494 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 29577 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494 chr13 69588733 69588978 + 2.12469164491494 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 22608 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494-2 chr11 117990260 117990771 + 2.12469164491494 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 3658 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494-7 chr8 110942513 110943071 + 2.12469164491494 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 22927 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494 chr10 84726529 84727008 + 2.12469164491494 NA 3' UTR (NM_027423, exon 28 of 28) 3' UTR (NM_027423, exon 28 of 28) -29280 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding unique_peak1_34_11_1.26639349182465_4.21815924663348_2.12469164491494-4 chr15 74721183 74721520 + 2.12469164491494 NA exon (NM_198607, exon 1 of 2) exon (NM_198607, exon 1 of 2) 117 NM_198607 223626 Mm.268603 NM_198607 ENSMUSG00000056665 Them6 4930572J05Rik thioesterase superfamily member 6 protein-coding unique_peak1_56_23_0.965036556051445_5.06748077874688_2.12460644252803 chr11 120457510 120458013 + 2.12460644252803 NA promoter-TSS (NM_152807) promoter-TSS (NM_152807) 309 NM_001356385 66431 Mm.45063 NM_025560 ENSMUSG00000039670 Oxld1 1810049H13Rik oxidoreductase like domain containing 1 protein-coding unique_peak1_56_23_0.965036556051445_5.06748077874688_2.12460644252803-2 chr3 121901480 121902351 + 2.12460644252803 NA Intergenic Intergenic -51314 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak2_27_47_-1.05326340692923_5.05833079725654_2.12460644252803 chr8 35589142 35589705 + 2.12460644252803 NA promoter-TSS (NR_040376) promoter-TSS (NR_040376) -403 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_56_23_0.965036556051445_5.06748077874688_2.12460644252803 chr4 89057537 89057905 + 2.12460644252803 NA intron (NR_033533, intron 2 of 2) intron (NR_033533, intron 2 of 2) 7414 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak1_56_23_0.965036556051445_5.06748077874688_2.12460644252803 chr11 35919791 35920656 + 2.12460644252803 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 59866 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_141_76_0.590779221438587_6.56217615141419_2.12391301572952 chr18 60610036 60611573 + 2.12391301572952 NA promoter-TSS (NM_001109975) promoter-TSS (NM_001109975) -700 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_141_76_0.590779221438587_6.56217615141419_2.12391301572952-2 chr7 113207474 113208727 + 2.12391301572952 NA intron (NM_001357070, intron 1 of 19) CpG 635 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_138_162_-0.521751102847991_7.08785260280708_2.12298755718682 chr4 83301370 83303444 + 2.12298755718682 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 21782 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_139_162_-0.511482120831761_7.0929870938152_2.12298755718682 chr5 64196064 64197743 + 2.12298755718682 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -33454 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_33_54_-0.971528856188209_5.29559528543056_2.12244165266812 chr12 24707749 24708630 + 2.12244165266812 NA promoter-TSS (NM_009104) promoter-TSS (NM_009104) -65 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding common_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811-5 chr5 103780262 103781115 + 2.12244165266811 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 26115 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811-3 chr3 56183464 56184114 + 2.12244165266811 NA promoter-TSS (NM_030595) promoter-TSS (NM_030595) -88 NM_030595 26422 Mm.384353 NM_030595 ENSMUSG00000027799 Nbea Lyst2|mKIAA1544 neurobeachin protein-coding common_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811 chr12 111377865 111378412 + 2.12244165266811 NA promoter-TSS (NM_183016) promoter-TSS (NM_183016) -420 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding common_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811-4 chr3 88830885 88831545 + 2.12244165266811 NA intron (NR_015498, intron 1 of 1) intron (NR_015498, intron 1 of 1) 1272 NR_015498 319830 Mm.400394 NR_015498 1500004A13Rik 5430404N14Rik|BB132176 RIKEN cDNA 1500004A13 gene ncRNA common_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811-6 chr5 143731435 143732250 + 2.12244165266811 NA intron (NM_029749, intron 1 of 17) CpG 438 NM_029749 76800 Mm.259620 NM_029749 ENSMUSG00000051306 Usp42 2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e ubiquitin specific peptidase 42 protein-coding common_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811-2 chr3 27585421 27586227 + 2.12244165266811 NA promoter-TSS (NR_037275) promoter-TSS (NR_037275) -829 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_65_28_0.902030009696943_5.30899599997604_2.12244165266811 chr19 58522293 58523145 + 2.12244165266811 NA intron (NM_029372, intron 3 of 8) intron (NM_029372, intron 3 of 8) 10717 NM_029372 75645 Mm.159542 NM_029372 ENSMUSG00000025090 Ccdc172 1700011F14Rik coiled-coil domain containing 172 protein-coding common_peak2_261_277_-0.383933743854361_7.92697420079633_2.12140022034657 chr15 38922656 38924248 + 2.12140022034657 NA Intergenic Intergenic -10457 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_116_60_0.649417061773891_6.25544586844983_2.12138537076619 chr2 23571216 23572112 + 2.12138537076619 NA intron (NM_029773, intron 1 of 10) CpG 440 NM_029773 76857 Mm.276415 NM_029773 ENSMUSG00000026771 Spopl 4921517N04Rik|AU014935|BB233739|E430033K04Rik speckle-type POZ protein-like protein-coding common_peak2_117_60_0.661608768186548_6.26154172165616_2.12138537076619 chr2 23571197 23572117 + 2.12138537076619 NA intron (NM_029773, intron 1 of 10) intron (NM_029773, intron 1 of 10) 447 NM_029773 76857 Mm.276415 NM_029773 ENSMUSG00000026771 Spopl 4921517N04Rik|AU014935|BB233739|E430033K04Rik speckle-type POZ protein-like protein-coding common_peak1_116_60_0.649417061773891_6.25544586844983_2.12138537076619-2 chr7 28947947 28949776 + 2.12138537076619 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 13471 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_72_96_-0.695497406621201_6.25216413887653_2.12138537076617 chr10 59896897 59897669 + 2.12138537076617 NA intron (NM_019965, intron 8 of 8) intron (NM_019965, intron 8 of 8) 17692 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_132_156_-0.530853224345594_7.02919413671883_2.1207478721889 chr9 72110707 72112378 + 2.1207478721889 NA promoter-TSS (NM_001253862) promoter-TSS (NM_001253862) 277 NM_001253865 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_191_109_0.508350994200858_7.03553521062509_2.1207478721889 chr11 98794496 98796637 + 2.1207478721889 NA promoter-TSS (NM_001361932) promoter-TSS (NM_001361932) 50 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male specific lethal 1 protein-coding common_peak1_154_85_0.556786704031318_6.70465810671776_2.11986780665409 chr19 55541585 55542568 + 2.11986780665409 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 160128 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_292_179_0.403349878387695_7.69352803552352_2.119811588338 chr15 76194430 76196163 + 2.119811588338 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 414 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_135_72_0.605896339309946_6.49277272853499_2.11976016987425 chr11 97278682 97280510 + 2.11976016987425 NA intron (NM_008942, intron 1 of 22) intron (NM_008942, intron 1 of 22) 980 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-5 chr1 181009266 181009690 + 2.11898024768848 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 8091 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak2_9_24_-1.58710426722981_3.85030405615982_2.11898024768848-2 chr1 75381694 75382017 + 2.11898024768848 NA promoter-TSS (NM_001085371) promoter-TSS (NM_001085371) -259 NM_001085371 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding unique_peak2_9_24_-1.58710426722981_3.85030405615982_2.11898024768848 chr1 72283866 72284157 + 2.11898024768848 NA promoter-TSS (NM_175564) promoter-TSS (NM_175564) 310 NM_023523 111175 Mm.281738 NM_023523 ENSMUSG00000026189 Pecr 2400003B18Rik|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-14 chr16 6890621 6890984 + 2.11898024768848 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -148568 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-6 chr10 60799101 60799541 + 2.11898024768848 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 32260 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-18 chr3 60423870 60424189 + 2.11898024768848 NA Intergenic Intergenic -48801 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_28_8_1.4120429995082_3.87594650119641_2.11898024768848 chr13 91931034 91931277 + 2.11898024768848 NA intron (NM_009027, intron 5 of 14) intron (NM_009027, intron 5 of 14) -54270 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-20 chr3 121736113 121736469 + 2.11898024768848 NA Intergenic Intergenic 12754 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-10 chr12 110991865 110992154 + 2.11898024768848 NA Intergenic Intergenic -2389 NR_036598 77878 Mm.293198 NR_036598 ENSMUSG00000113056 6030440G07Rik - RIKEN cDNA 6030440G07 gene ncRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-4 chr1 92128572 92128929 + 2.11898024768848 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 51591 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding unique_peak2_9_24_-1.58710426722981_3.85030405615982_2.11898024768848-3 chr1 185229563 185229942 + 2.11898024768848 NA intron (NM_001163754, intron 2 of 34) intron (NM_001163754, intron 2 of 34) -13174 NR_034044 100217449 Mm.429560 NR_034044 ENSMUSG00000077571 Snora36b MBI-87 small nucleolar RNA, H/ACA box 36B snoRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-15 chr16 45059896 45060261 + 2.11898024768848 NA Intergenic Intergenic -33933 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-22 chr5 125076294 125076764 + 2.11898024768848 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 73054 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848 chr12 113012428 113012654 + 2.11898024768848 NA Intergenic Intergenic -1967 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-2 chr4 129335591 129335814 + 2.11898024768848 NA promoter-TSS (NM_025970) promoter-TSS (NM_025970) -324 NM_025970 67106 Mm.36575 NM_025970 ENSMUSG00000057572 Zbtb8os 2010001H09Rik|2310028N13Rik|AI851226|Arch|Archm zinc finger and BTB domain containing 8 opposite strand protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-3 chr1 87174332 87174899 + 2.11898024768848 NA Intergenic Intergenic -8699 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding unique_peak2_9_24_-1.58710426722981_3.85030405615982_2.11898024768848-4 chr17 82939572 82940001 + 2.11898024768848 NA Intergenic Intergenic 138439 NR_045094 100503434 Mm.187281 NR_045094 Gm19689 - predicted gene, 19689 ncRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-12 chr13 52651503 52651831 + 2.11898024768848 NA Intergenic Intergenic 54785 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak2_9_24_-1.58710426722981_3.85030405615982_2.11898024768848-5 chr5 103730981 103731345 + 2.11898024768848 NA Intergenic Intergenic -22999 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-11 chr12 111353867 111354205 + 2.11898024768848 NA intron (NM_183016, intron 1 of 36) intron (NM_183016, intron 1 of 36) 23682 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-23 chr6 17170561 17170995 + 2.11898024768848 NA intron (NR_153844, intron 1 of 2) intron (NR_153844, intron 1 of 2) 1055 NR_153844 232599 Mm.430719 NM_177689 Gm4876 B930018B01|EG232599 predicted gene 4876 ncRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-2 chr1 81740481 81740834 + 2.11898024768848 NA Intergenic Intergenic -391259 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-24 chr6 113482705 113483231 + 2.11898024768848 NA promoter-TSS (NM_133930) promoter-TSS (NM_133930) -388 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-17 chr2 131839626 131840157 + 2.11898024768848 NA intron (NR_029381, intron 1 of 2) intron (NR_029381, intron 1 of 2) 7765 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-9 chr11 97801443 97801777 + 2.11898024768848 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 2045 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding unique_peak2_9_24_-1.58710426722981_3.85030405615982_2.11898024768848-6 chr7 79860081 79860625 + 2.11898024768848 NA Intergenic Intergenic -12143 NM_008486 16790 Mm.4487 NM_008486 ENSMUSG00000039062 Anpep AP-M|AP-N|Apn|Cd13|P150 alanyl (membrane) aminopeptidase protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-8 chr10 80146712 80147121 + 2.11898024768848 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1356 NM_001305798 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-16 chr2 76370074 76370296 + 2.11898024768848 NA exon (NM_153405, exon 1 of 10) exon (NM_153405, exon 1 of 10) 201 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848 chr1 64003317 64003856 + 2.11898024768848 NA Intergenic Intergenic 38859 NR_027824 433315 Mm.342696 NM_001013800 ENSMUSG00000044689 Gm13749 - predicted gene 13749 ncRNA unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-25 chr8 122342936 122343525 + 2.11898024768848 NA Intergenic Intergenic 19598 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-21 chr4 107602493 107602721 + 2.11898024768848 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 80982 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-13 chr15 78470222 78470751 + 2.11898024768848 NA Intergenic Intergenic -1852 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-19 chr3 94649701 94650104 + 2.11898024768848 NA intron (NM_011656, intron 1 of 12) intron (NM_011656, intron 1 of 12) 8970 NM_001293728 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding unique_peak1_28_8_1.4120429995082_3.87594650119641_2.11898024768848-7 chr10 71122372 71122722 + 2.11898024768848 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 37143 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_123_64_0.641026746951083_6.342881186504_2.11810557194205 chr3 121687003 121688208 + 2.11810557194205 NA Intergenic Intergenic 16842 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_122_64_0.629427356799439_6.33708149142817_2.11810557194205 chr2 163644276 163645085 + 2.11810557194205 NA promoter-TSS (NR_028113) promoter-TSS (NR_028113) -170 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA common_peak2_77_101_-0.673106544862171_6.33587206954041_2.11810557194203 chr2 128457115 128458718 + 2.11810557194203 NA Intergenic Intergenic -28565 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak1_129_68_0.622560657284335_6.41980478542034_2.11770782211405 chr10 80163775 80165089 + 2.11770782211405 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -3407 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_228_246_-0.406208903572484_7.74526277979844_2.11645347042537 chr1 88474852 88477189 + 2.11645347042537 NA Intergenic Intergenic 34046 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding common_peak2_94_46_0.727176522048143_5.91817711270171_2.11469976509036 chr9 54950828 54951552 + 2.11469976509036 NA promoter-TSS (NM_145229) promoter-TSS (NM_145229) -236 NM_145229 246735 Mm.473773 NM_145229 ENSMUSG00000044820 AY074887 Mcpr1 cDNA sequence AY074887 protein-coding common_peak2_55_78_-0.779136633958423_5.91421243119789_2.11469976509036 chr11 6267074 6268103 + 2.11469976509036 NA intron (NM_026538, intron 1 of 13) CpG-1708 141 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding unique_peak2_55_78_-0.779136633958423_5.91421243119789_2.11469976509036 chr15 58380044 58380981 + 2.11469976509036 NA intron (NM_027211, intron 1 of 8) intron (NM_027211, intron 1 of 8) 8762 NM_027211 69787 Mm.237985 NM_027211 Anxa13 1810034H17Rik|AV055219 annexin A13 protein-coding common_peak2_55_78_-0.779136633958423_5.91421243119789_2.11469976509036-2 chr8 119813698 119814832 + 2.11469976509036 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 26314 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_236_254_-0.403005147929371_7.79285086289417_2.11429987745252 chr11 98026119 98027769 + 2.11429987745252 NA promoter-TSS (NM_009078) promoter-TSS (NM_009078) 20 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding common_peak2_63_87_-0.74350153356599_6.0876808518543_2.11210046032967 chr6 35177326 35178137 + 2.11210046032967 NA intron (NM_027513, intron 1 of 42) CpG 115 NM_027513 70699 Mm.261208 NM_027513 ENSMUSG00000038759 Nup205 3830404O05Rik|AV248391|mKIAA0225 nucleoporin 205 protein-coding common_peak1_275_167_0.417261522098459_7.60094818382799_2.11185294699555 chr15 76008597 76009875 + 2.11185294699555 NA intron (NM_134087, intron 1 of 4) CpG 262 NM_001168253 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding common_peak2_98_122_-0.601667898287271_6.6416805561956_2.11160929055985 chr9 35116506 35118524 + 2.11160929055985 NA promoter-TSS (NM_009178) promoter-TSS (NM_009178) -651 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 SIAT4-C|ST3Gal IV|ST3GalIV|Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding common_peak1_231_137_0.45227860545261_7.33466375950447_2.10986964914458-2 chr19 6278467 6280009 + 2.10986964914458 NA intron (NM_010119, intron 1 of 4) intron (NM_010119, intron 1 of 4) 2342 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak1_231_137_0.45227860545261_7.33466375950447_2.10986964914458 chr15 85653534 85655605 + 2.10986964914458 NA Intergenic Intergenic -49204 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_319_330_-0.34921038212852_8.19608221574296_2.10871120066358 chr10 120473627 120477336 + 2.10871120066358 NA intron (NM_001347170, intron 1 of 5) CpG 988 NM_001347170 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_37_58_-0.913479594816694_5.42590325195349_2.1080251538739 chr2 126309405 126310070 + 2.1080251538739 NA Intergenic Intergenic 157596 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_37_58_-0.913479594816694_5.42590325195349_2.1080251538739 chr7 139283570 139284006 + 2.1080251538739 NA Intergenic Intergenic 35306 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_37_58_-0.913479594816694_5.42590325195349_2.1080251538739-2 chr5 143622407 143623093 + 2.1080251538739 NA intron (NM_011182, intron 1 of 12) CpG 303 NM_011182 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak2_37_58_-0.913479594816694_5.42590325195349_2.1080251538739-3 chr7 126474633 126475384 + 2.1080251538739 NA 5' UTR (NM_001289541, exon 1 of 9) 5' UTR (NM_001289541, exon 1 of 9) 122 NM_001289538 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding common_peak2_70_31_0.864620741706731_5.43231037085337_2.10802515387389 chr4 155221081 155221780 + 2.10802515387389 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 1105 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_70_31_0.864620741706731_5.43231037085337_2.10802515387389 chr10 26373520 26374737 + 2.10802515387389 NA promoter-TSS (NM_001347467) promoter-TSS (NM_001347467) -56 NM_001359254 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 L3MBTL3 histone methyl-lysine binding protein protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-9 chr14 14071925 14072115 + 2.10720996964787 NA intron (NM_139227, intron 4 of 11) intron (NM_139227, intron 4 of 11) 48884 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-20 chr6 79387521 79387746 + 2.10720996964787 NA Intergenic Intergenic 355591 NR_040301 100504701 Mm.400420 NR_040301 ENSMUSG00000108072 Gm20362 - predicted gene, 20362 ncRNA unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-14 chr17 73972559 73972746 + 2.10720996964787 NA Intergenic Intergenic -22456 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-19 chr6 52828710 52828962 + 2.10720996964787 NA intron (NM_173406, intron 2 of 4) MER135|DNA|DNA 80784 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-8 chr13 72027663 72027853 + 2.10720996964787 NA Intergenic Intergenic -64035 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-23 chrX 94171525 94171715 + 2.10720996964787 NA Intergenic B2_Mm1t|SINE|B2 41031 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-4 chr10 69576706 69576895 + 2.10720996964787 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 43092 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-18 chr5 105774655 105774863 + 2.10720996964787 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 73949 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-22 chr9 50850515 50850728 + 2.10720996964787 NA Intergenic Intergenic -6303 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-17 chr4 139143971 139144250 + 2.10720996964787 NA Intergenic ID_B1|SINE|B4 -12997 NM_001163006 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-7 chr13 47042912 47043105 + 2.10720996964787 NA promoter-TSS (NM_172262) promoter-TSS (NM_172262) 209 NM_016785 22017 Mm.10169 NM_016785 ENSMUSG00000021376 Tpmt AW106912 thiopurine methyltransferase protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-16 chr2 29776169 29776440 + 2.10720996964787 NA non-coding (NR_110962, exon 6 of 6) non-coding (NR_110962, exon 6 of 6) -11189 NR_145504 227683 Mm.245948 NM_178693 ENSMUSG00000026798 Coq4 D2Ertd97e coenzyme Q4 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-21 chr6 108303497 108303690 + 2.10720996964787 NA intron (NM_010585, intron 4 of 61) intron (NM_010585, intron 4 of 61) 90497 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-6 chr11 96626377 96626604 + 2.10720996964787 NA intron (NM_001033186, intron 4 of 12) intron (NM_001033186, intron 4 of 12) 151065 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-24 chrX 99132850 99133080 + 2.10720996964787 NA Intergenic Intergenic -3096 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-12 chr16 23431422 23431645 + 2.10720996964787 NA exon (NM_001004151, exon 2 of 2) exon (NM_001004151, exon 2 of 2) 2400 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-15 chr18 39446226 39446424 + 2.10720996964787 NA intron (NM_008173, intron 1 of 7) intron (NM_008173, intron 1 of 7) 40920 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-2 chr10 18473361 18473556 + 2.10720996964787 NA intron (NM_001163592, intron 2 of 7) intron (NM_001163592, intron 2 of 7) 3477 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-5 chr11 54074986 54075215 + 2.10720996964787 NA Intergenic Intergenic -6083 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-11 chr15 31193361 31193551 + 2.10720996964787 NA Intergenic Intergenic -30929 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-10 chr14 67940431 67940652 + 2.10720996964787 NA Intergenic Intergenic -6969 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787 chr1 65389338 65389534 + 2.10720996964787 NA TTS (NM_139270) TTS (NM_139270) 78179 NM_139270 213527 Mm.294225 NM_139270 ENSMUSG00000025946 Pth2r Pthr2 parathyroid hormone 2 receptor protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-13 chr16 75752557 75752744 + 2.10720996964787 NA Intergenic ORR1C2-int|LTR|ERVL-MaLR 14168 NR_027492 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding unique_peak1_6_0_2.54580905293841_1.27290452646921_2.10720996964787-3 chr10 21786484 21786677 + 2.10720996964787 NA Intergenic B3A|SINE|B2 -95604 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_53_21_1.01311523226286_4.96598923476873_2.1071344868417 chr3 20154597 20155179 + 2.1071344868417 NA intron (NM_001355261, intron 1 of 7) CpG 228 NM_001355261 27357 Mm.6375 NM_013755 ENSMUSG00000019528 Gyg AU017667|GN1|Gyg1 glycogenin protein-coding unique_peak1_53_21_1.01311523226286_4.96598923476873_2.1071344868417 chr15 32323214 32324029 + 2.1071344868417 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 78808 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_53_21_1.01311523226286_4.96598923476873_2.1071344868417-2 chr8 126424492 126425156 + 2.1071344868417 NA intron (NM_174987, intron 1 of 1) intron (NM_174987, intron 1 of 1) 2323 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak2_25_44_-1.06631492187456_4.95869563539239_2.1071344868417 chr2 29421988 29422392 + 2.1071344868417 NA intron (NM_001290489, intron 2 of 6) intron (NM_001290489, intron 2 of 6) 43676 NM_001290490 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak1_53_21_1.01311523226286_4.96598923476873_2.1071344868417-2 chr3 102669995 102670933 + 2.1071344868417 NA Intergenic Intergenic -64306 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak2_25_44_-1.06631492187456_4.95869563539239_2.1071344868417 chr9 123020836 123021481 + 2.1071344868417 NA promoter-TSS (NM_025339) promoter-TSS (NM_025339) -168 NM_025339 66079 Mm.482265 NM_025339 ENSMUSG00000066233 Tmem42 0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e transmembrane protein 42 protein-coding unique_peak2_24_44_-1.12249925460412_4.93060346902761_2.1071344868417 chr8 11333931 11334612 + 2.1071344868417 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -21445 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_89_43_0.744881549216042_5.83187239324532_2.10608451406334 chr10 80900018 80900764 + 2.10608451406334 NA TTS (NM_010722) TTS (NM_010722) 578 NM_013895 30055 Mm.142132 NM_013895 ENSMUSG00000020219 Timm13 D10Ertd378e|Tim9|Timm9 translocase of inner mitochondrial membrane 13 protein-coding common_peak1_89_43_0.744881549216042_5.83187239324532_2.10608451406334 chr7 70358423 70359306 + 2.10608451406334 NA intron (NM_183261, intron 1 of 2) G-rich|Low_complexity|Low_complexity 1729 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak1_127_151_-0.539052407945522_6.97840130947082_2.1056732094218 chr16 56028905 56030282 + 2.1056732094218 NA intron (NM_001356449, intron 1 of 5) CpG 124 NM_001356449 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak1_128_151_-0.527904360579942_6.98397533315361_2.1056732094218 chrX 152233039 152234005 + 2.1056732094218 NA 5' UTR (NM_013668, exon 1 of 26) 5' UTR (NM_013668, exon 1 of 26) 295 NM_013668 20591 Mm.142655 NM_013668 ENSMUSG00000025332 Kdm5c D930009K15Rik|Jarid1c|Smcx|mKIAA0234 lysine (K)-specific demethylase 5C protein-coding common_peak2_112_57_0.67234170653268_6.19415184839391_2.10309224529148 chr15 91672690 91673651 + 2.10309224529148 NA promoter-TSS (NM_025730) promoter-TSS (NM_025730) -54 NM_025730 66725 Mm.37558 NM_025730 ENSMUSG00000036273 Lrrk2 4921513O20Rik|9330188B09Rik|AW561911|D630001M17Rik|Gm927|cI-46 leucine-rich repeat kinase 2 protein-coding common_peak1_104_128_-0.586090640223239_6.71818193531163_2.10264449290308 chr2 23156087 23157079 + 2.10264449290308 NA promoter-TSS (NM_025979) promoter-TSS (NM_025979) 78 NM_013771 27377 Mm.23335 NM_013771 ENSMUSG00000026775 Yme1l1 FtsH1|Ftsh YME1-like 1 (S. cerevisiae) protein-coding common_peak1_75_34_0.832825458026936_5.54569574595843_2.10043913593603 chr1 73997697 73998921 + 2.10043913593603 NA intron (NM_001289895, intron 6 of 32) intron (NM_001289895, intron 6 of 32) 126138 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_75_34_0.832825458026936_5.54569574595843_2.10043913593603 chr3 51408514 51408938 + 2.10043913593603 NA intron (NM_025523, intron 1 of 3) intron (NM_025523, intron 1 of 3) 229 NM_025523 66377 Mm.331007 NM_025523 ENSMUSG00000037152 Ndufc1 2310016K22Rik|KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein-coding unique_peak1_74_34_0.813851447434796_5.53620874066236_2.10043913593603 chr4 43039451 43040081 + 2.10043913593603 NA intron (NR_045567, intron 1 of 7) intron (NR_045567, intron 1 of 7) 535 NM_001253353 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding unique_peak2_47_70_-0.845926452632677_5.72678389318834_2.10039660541362 chr3 122487819 122488729 + 2.10039660541362 NA intron (NM_001355264, intron 1 of 9) intron (NM_001355264, intron 1 of 9) 4705 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak1_84_40_0.764880771899002_5.73999239056758_2.10039660541362 chr11 94991009 94991766 + 2.10039660541362 NA 5' UTR (NM_172261, exon 1 of 10) 5' UTR (NM_172261, exon 1 of 10) 175 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_85_40_0.781635546018105_5.74836977762714_2.10039660541362 chr14 55560048 55560660 + 2.10039660541362 NA promoter-TSS (NM_001199009) promoter-TSS (NM_001199009) 325 NM_133734 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding common_peak2_136_73_0.59676220848683_6.50783446987236_2.09979676679656 chr1 162215204 162216930 + 2.09979676679656 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -1556 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak2_15_32_-1.31435407514066_4.38721708178812_2.09887956687855-3 chr9 6639688 6640198 + 2.09887956687855 NA Intergenic Intergenic -373396 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-3 chr8 105595814 105596071 + 2.09887956687855 NA Intergenic Intergenic -9287 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding unique_peak2_15_32_-1.31435407514066_4.38721708178812_2.09887956687855 chr15 7013496 7013979 + 2.09887956687855 NA Intergenic Intergenic -115835 NM_001113386 16880 Mm.149720 NM_013584 ENSMUSG00000054263 Lifr A230075M04Rik|AW061234|LIF leukemia inhibitory factor receptor protein-coding common_peak2_15_32_-1.31435407514066_4.38721708178812_2.09887956687855-2 chr7 79348375 79348798 + 2.09887956687855 NA intron (NM_018811, intron 6 of 10) intron (NM_018811, intron 6 of 10) 38441 NM_020599 19771 Mm.41653 NM_020599 ENSMUSG00000039194 Rlbp1 3110056M11Rik|CRALBP retinaldehyde binding protein 1 protein-coding unique_peak2_15_32_-1.31435407514066_4.38721708178812_2.09887956687855-2 chr5 92813202 92813755 + 2.09887956687855 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 4096 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_15_32_-1.31435407514066_4.38721708178812_2.09887956687855 chr13 108039769 108040019 + 2.09887956687855 NA Intergenic Intergenic -4580 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding unique_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-3 chr3 96170715 96171307 + 2.09887956687855 NA intron (NM_181409, intron 16 of 16) intron (NM_181409, intron 16 of 16) -1495 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding unique_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-4 chr3 145576786 145577112 + 2.09887956687855 NA exon (NM_001346521, exon 2 of 11) exon (NM_001346521, exon 2 of 11) 733 NM_001346521 229937 Mm.24586 NM_001081094 ENSMUSG00000074182 Znhit6 2410019A14Rik zinc finger, HIT type 6 protein-coding common_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-2 chr6 108659046 108659438 + 2.09887956687855 NA intron (NR_104577, intron 1 of 6) intron (NR_104577, intron 1 of 6) -1387 NM_011498 20893 Mm.2436 NM_011498 ENSMUSG00000030103 Bhlhe40 Bhlhb2|C130042M06Rik|CR8|Clast5|Dec1|Sharp2|Stra13|Stra14 basic helix-loop-helix family, member e40 protein-coding unique_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855 chr13 65278935 65279463 + 2.09887956687855 NA intron (NM_178364, intron 1 of 7) intron (NM_178364, intron 1 of 7) 345 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding unique_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-5 chr4 137705124 137705598 + 2.09887956687855 NA intron (NM_001081155, intron 3 of 24) intron (NM_001081155, intron 3 of 24) 1245 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA unique_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-2 chr14 66094509 66095037 + 2.09887956687855 NA exon (NM_001271403, exon 10 of 18) exon (NM_001271403, exon 10 of 18) 15887 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855-4 chr9 96196337 96196649 + 2.09887956687855 NA 5' UTR (NM_001184708, exon 1 of 10) 5' UTR (NM_001184708, exon 1 of 10) 218 NM_001184708 211586 Mm.17977 NM_178667 ENSMUSG00000032411 Tfdp2 1110029I05Rik|A330080J22Rik|DP-3|DP3 transcription factor Dp 2 protein-coding common_peak1_38_13_1.19901885462496_4.40686434937009_2.09887956687855 chr3 65300352 65300766 + 2.09887956687855 NA intron (NM_001357358, intron 5 of 13) intron (NM_001357358, intron 5 of 13) 2126 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak2_79_37_0.787659470381601_5.64175724863439_2.09824894066342 chr5 138263342 138263998 + 2.09824894066342 NA promoter-TSS (NR_045821) promoter-TSS (NR_045821) -375 NR_045821 69004 Mm.439868 NR_045821 ENSMUSG00000085227 6330418K02Rik - RIKEN cDNA 6330418K02 gene ncRNA common_peak1_80_37_0.805454939684028_5.6506549832856_2.09824894066342 chr9 35569591 35570044 + 2.09824894066342 NA intron (NM_029762, intron 1 of 3) CpG 252 NM_029762 76832 Mm.482285 NM_029762 ENSMUSG00000050555 Hyls1 3010015K02Rik HYLS1, centriolar and ciliogenesis associated protein-coding common_peak2_44_66_-0.854721043031188_5.63872866894218_2.09824894066341 chr18 47330654 47331455 + 2.09824894066341 NA intron (NM_001311097, intron 1 of 17) intron (NM_001311097, intron 1 of 17) 37814 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak1_239_256_-0.396256942714483_7.80749607783664_2.09811798868377 chr10 24589609 24592482 + 2.09811798868377 NA Intergenic Intergenic -4397 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_73_97_-0.69080408263101_6.2693078027997_2.09792773125679 chr5 96996638 96997598 + 2.09792773125679 NA promoter-TSS (NM_080708) promoter-TSS (NM_080708) -571 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak2_60_83_-0.745161353475885_6.01973674604082_2.09773305436614-2 chr7 141562309 141563072 + 2.09773305436614 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 510 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_60_83_-0.745161353475885_6.01973674604082_2.09773305436614 chr10 24589586 24590230 + 2.09773305436614 NA Intergenic Intergenic -5534 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_258_156_0.423889082593457_7.50656529018836_2.09762823493747 chr15 83408652 83411136 + 2.09762823493747 NA intron (NM_001358643, intron 1 of 9) B3A|SINE|B2 22956 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_130_69_0.612779291497424_6.43567266269368_2.09673117042237 chr11 8450851 8451660 + 2.09673117042237 NA exon (NM_001083587, exon 22 of 31) exon (NM_001083587, exon 22 of 31) 213280 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_30_51_-1.02293519901507_5.18897211863356_2.09593985174545 chr19 24730242 24730612 + 2.09593985174545 NA intron (NM_175013, intron 8 of 10) intron (NM_175013, intron 8 of 10) 56419 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak2_31_51_-0.97745465349654_5.21171239139282_2.09593985174545 chr9 75541905 75542829 + 2.09593985174545 NA intron (NM_001357828, intron 1 of 10) intron (NM_001357828, intron 1 of 10) 17290 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_30_51_-1.02293519901507_5.18897211863356_2.09593985174545 chr13 31625731 31626646 + 2.09593985174545 NA exon (NM_010225, exon 1 of 2) exon (NM_010225, exon 1 of 2) 372 NM_010225 14238 Mm.125548 NM_010225 ENSMUSG00000038402 Foxf2 FREAC2|Fkh20|LUN forkhead box F2 protein-coding common_peak2_30_51_-1.02293519901507_5.18897211863356_2.09593985174545-2 chr13 104515921 104516538 + 2.09593985174545 NA Intergenic Intergenic 228394 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_30_51_-1.02293519901507_5.18897211863356_2.09593985174545-3 chr15 63484522 63485094 + 2.09593985174545 NA Intergenic Intergenic -5200 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak1_61_26_0.915562037389313_5.21266852085813_2.09593985174544 chr14 33250569 33251436 + 2.09593985174544 NA intron (NM_153800, intron 2 of 10) intron (NM_153800, intron 2 of 10) 34179 NM_153800 239027 Mm.318350 NM_153800 ENSMUSG00000063506 Arhgap22 B230341L19Rik|RHOGAP2|p68RacGAP Rho GTPase activating protein 22 protein-coding common_peak1_61_26_0.915562037389313_5.21266852085813_2.09593985174544-2 chr19 45054637 45055395 + 2.09593985174544 NA non-coding (NR_155547, exon 11 of 11) non-coding (NR_155547, exon 11 of 11) 7440 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak1_61_26_0.915562037389313_5.21266852085813_2.09593985174544 chr11 70014790 70015325 + 2.09593985174544 NA intron (NM_017366, intron 2 of 19) intron (NM_017366, intron 2 of 19) 371 NM_017366 11370 Mm.18630 NM_017366 ENSMUSG00000018574 Acadvl vlcad acyl-Coenzyme A dehydrogenase, very long chain protein-coding common_peak2_154_177_-0.492681972232981_7.22939244484991_2.09491996789938 chr10 108445051 108446719 + 2.09491996789938 NA Intergenic Intergenic 113696 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_49_19_1.04037076726495_4.84211347851984_2.09421125609714-3 chr3 144993552 144994285 + 2.09421125609714 NA Intergenic Intergenic -18873 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak1_49_19_1.04037076726495_4.84211347851984_2.09421125609714 chr12 17347694 17348297 + 2.09421125609714 NA promoter-TSS (NM_001008421) promoter-TSS (NM_001008421) -498 NM_001008421 217431 Mm.27536 NM_001008421 ENSMUSG00000061458 Nol10 Gm67 nucleolar protein 10 protein-coding common_peak2_49_19_1.04037076726495_4.84211347851984_2.09421125609714 chr4 116463630 116463885 + 2.09421125609714 NA exon (NM_008641, exon 1 of 29) exon (NM_008641, exon 1 of 29) 424 NM_001042743 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding common_peak1_22_41_-1.14240914140926_4.82111285207413_2.09421125609714 chr14 33336314 33336582 + 2.09421125609714 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 74576 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_22_41_-1.14240914140926_4.82111285207413_2.09421125609714-2 chr15 8109356 8109684 + 2.09421125609714 NA exon (NM_133227, exon 1 of 35) exon (NM_133227, exon 1 of 35) 207 NM_133227 170762 Mm.295168 NM_133227 ENSMUSG00000022142 Nup155 D930027M19Rik|mKIAA0791 nucleoporin 155 protein-coding common_peak1_49_19_1.04037076726495_4.84211347851984_2.09421125609714-4 chr4 147936421 147937053 + 2.09421125609714 NA promoter-TSS (NM_011122) promoter-TSS (NM_011122) 39 NM_011122 18822 Mm.23951 NM_011122 ENSMUSG00000019055 Plod1 2410042F05Rik|AI854890|AV007929|Lh1|Plod procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 protein-coding unique_peak1_49_19_1.04037076726495_4.84211347851984_2.09421125609714 chr6 42545130 42545831 + 2.09421125609714 NA Intergenic Intergenic -6460 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding common_peak2_22_41_-1.14240914140926_4.82111285207413_2.09421125609714 chr14 33336221 33336620 + 2.09421125609714 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 74604 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak1_49_19_1.04037076726495_4.84211347851984_2.09421125609714-2 chr3 52577142 52577565 + 2.09421125609714 NA Intergenic Intergenic 60389 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA unique_peak1_49_19_1.04037076726495_4.84211347851984_2.09421125609714-2 chr6 54830184 54831288 + 2.09421125609714 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 13820 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-30 chr17 73250929 73251226 + 2.09384600808989 NA Intergenic Intergenic 143092 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-62 chr5 72862044 72862312 + 2.09384600808989 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 6270 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-12 chr3 132814873 132815093 + 2.09384600808989 NA intron (NM_001163455, intron 24 of 25) intron (NM_001163455, intron 24 of 25) 63613 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-5 chr12 100298305 100298614 + 2.09384600808989 NA non-coding (NR_045741, exon 4 of 4) non-coding (NR_045741, exon 4 of 4) 21850 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-91 chrX 56346501 56346704 + 2.09384600808989 NA intron (NM_001359276, intron 1 of 3) intron (NM_001359276, intron 1 of 3) 205 NM_030139 78619 Mm.207345 NM_030139 ENSMUSG00000073176 Zfp449 9530049C15Rik zinc finger protein 449 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-10 chr11 72493279 72493488 + 2.09384600808989 NA Intergenic Intergenic -3463 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-46 chr3 96499949 96500188 + 2.09384600808989 NA Intergenic Intergenic -25117 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-9 chr16 43664004 43664230 + 2.09384600808989 NA promoter-TSS (NM_001146325) promoter-TSS (NM_001146325) 67 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-53 chr3 155056408 155056632 + 2.09384600808989 NA Intergenic Intergenic -1113 NM_177066 435766 Mm.210428 NM_177066 ENSMUSG00000040086 Tnni3k Cark|D830019J24Rik TNNI3 interacting kinase protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-90 chrX 12938856 12939055 + 2.09384600808989 NA TTS (NM_001272033) TTS (NM_001272033) 2082 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-14 chr7 120722067 120722290 + 2.09384600808989 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) -17379 NM_177697 233813 Mm.389939 NM_177697 ENSMUSG00000030889 Vwa3a E030013G06Rik von Willebrand factor A domain containing 3A protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-14 chr13 36298246 36298540 + 2.09384600808989 NA intron (NM_001039189, intron 3 of 5) intron (NM_001039189, intron 3 of 5) 180750 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989 chr1 39954173 39954404 + 2.09384600808989 NA intron (NM_001252202, intron 2 of 29) intron (NM_001252202, intron 2 of 29) 53375 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-4 chr12 8342106 8342332 + 2.09384600808989 NA 3' UTR (NM_021429, exon 7 of 7) 3' UTR (NM_021429, exon 7 of 7) 28786 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-64 chr5 89052088 89052309 + 2.09384600808989 NA intron (NM_001359212, intron 3 of 22) intron (NM_001359212, intron 3 of 22) 24232 NM_001359213 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-76 chr6 119446290 119446513 + 2.09384600808989 NA exon (NM_001271758, exon 3 of 5) exon (NM_001271758, exon 3 of 5) 2985 NM_001271757 22419 Mm.321818 NM_009525 ENSMUSG00000030170 Wnt5b AW545702|Wnt-5b wingless-type MMTV integration site family, member 5B protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-48 chr3 104791664 104791884 + 2.09384600808989 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 2740 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-26 chr16 57397558 57397791 + 2.09384600808989 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 44397 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-15 chr8 84909430 84909636 + 2.09384600808989 NA exon (NM_010062, exon 4 of 6) exon (NM_010062, exon 4 of 6) 909 NM_010062 13423 Mm.350831 NM_010062 ENSMUSG00000003812 Dnase2a Dnase2 deoxyribonuclease II alpha protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-87 chr9 63740626 63740964 + 2.09384600808989 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 17199 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-19 chr14 99327887 99328094 + 2.09384600808989 NA Intergenic B1_Mur3|SINE|Alu 29299 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-9 chr11 54100507 54100701 + 2.09384600808989 NA promoter-TSS (NM_011031) promoter-TSS (NM_011031) -320 NM_001136076 18452 Mm.3705 NM_011031 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-82 chr8 110844448 110844650 + 2.09384600808989 NA 5' UTR (NM_133953, exon 2 of 26) 5' UTR (NM_133953, exon 2 of 26) -2051 NM_001310607 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-73 chr6 86686596 86686870 + 2.09384600808989 NA Intergenic B1_Mur1|SINE|Alu -2242 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-79 chr7 80139209 80139435 + 2.09384600808989 NA Intergenic Intergenic -23972 NM_173011 269951 Mm.246432 NM_173011 ENSMUSG00000030541 Idh2 E430004F23|IDPm|Idh-2 isocitrate dehydrogenase 2 (NADP+), mitochondrial protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-31 chr18 69770121 69770346 + 2.09384600808989 NA Intergenic Intergenic -155326 NM_201362 381175 Mm.266831 NM_201362 ENSMUSG00000038903 Ccdc68 BC046343 coiled-coil domain containing 68 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-28 chr17 27318386 27318690 + 2.09384600808989 NA Intergenic Intergenic -1443 NR_106073 102465700 NR_106073 ENSMUSG00000105142 Mir7214 mmu-mir-7214 microRNA 7214 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-45 chr3 90599889 90600077 + 2.09384600808989 NA promoter-TSS (NM_011310) promoter-TSS (NM_011310) -231 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-4 chr10 60269599 60269842 + 2.09384600808989 NA Intergenic Intergenic -7908 NM_001146123 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-86 chr9 63031355 63031598 + 2.09384600808989 NA Intergenic Intergenic -50597 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-40 chr2 155883341 155883615 + 2.09384600808989 NA intron (NM_001355443, intron 7 of 9) intron (NM_001355443, intron 7 of 9) 46832 NM_001355443 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-34 chr2 27183453 27183737 + 2.09384600808989 NA TTS (NM_138942) TTS (NM_138942) 18088 NM_138942 13166 Mm.167781 NM_138942 ENSMUSG00000000889 Dbh - dopamine beta hydroxylase protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-57 chr4 84509342 84509570 + 2.09384600808989 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 165630 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-3 chr10 24692621 24692858 + 2.09384600808989 NA intron (NM_001308329, intron 1 of 24) intron (NM_001308329, intron 1 of 24) 19420 NM_001308327 18605 Mm.27254 NM_008813 ENSMUSG00000037370 Enpp1 4833416E15Rik|AI428932|C76301|CD203c|E-NPP 1|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-8 chr15 85606396 85606656 + 2.09384600808989 NA Intergenic Intergenic -24705 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-8 chr11 28912027 28912316 + 2.09384600808989 NA intron (NM_146015, intron 5 of 10) intron (NM_146015, intron 5 of 10) 58966 NM_146015 216616 Mm.44176 NM_146015 ENSMUSG00000020467 Efemp1 - epidermal growth factor-containing fibulin-like extracellular matrix protein 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-50 chr3 121313645 121313853 + 2.09384600808989 NA intron (NM_024178, intron 2 of 3) intron (NM_024178, intron 2 of 3) 22009 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-44 chr3 90597108 90597311 + 2.09384600808989 NA intron (NM_001355602, intron 1 of 2) intron (NM_001355602, intron 1 of 2) -3005 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-23 chr16 5135652 5135883 + 2.09384600808989 NA Intergenic Intergenic -3286 NM_008909 19041 Mm.266875 NM_008909 ENSMUSG00000039457 Ppl AW553870 periplakin protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-88 chr9 88268078 88268339 + 2.09384600808989 NA Intergenic Intergenic -59401 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-75 chr6 100258060 100258489 + 2.09384600808989 NA intron (NM_019743, intron 2 of 4) MLT1A1|LTR|ERVL-MaLR 29084 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-67 chr5 124202049 124202265 + 2.09384600808989 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -14975 NM_001289472 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-55 chr4 55089445 55089792 + 2.09384600808989 NA Intergenic Intergenic 141673 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-16 chr13 74316111 74316344 + 2.09384600808989 NA intron (NM_001359996, intron 2 of 5) intron (NM_001359996, intron 2 of 5) 1099 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-16 chr9 96958160 96958406 + 2.09384600808989 NA intron (NM_145134, intron 2 of 2) intron (NM_145134, intron 2 of 2) 60072 NM_145134 211949 Mm.491271 NM_145134 ENSMUSG00000046997 Spsb4 D030068E18Rik|SSB-4|Ssb4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-78 chr6 145679291 145679585 + 2.09384600808989 NA Intergenic Intergenic 63475 NM_009449 22147 Mm.270295 NM_009449 ENSMUSG00000067338 Tuba3b M[a]7|Tuba7 tubulin, alpha 3B protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-51 chr3 122359865 122360054 + 2.09384600808989 NA Intergenic Intergenic -59798 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-92 chrX 142832918 142833166 + 2.09384600808989 NA intron (NR_152447, intron 6 of 8) intron (NR_152447, intron 6 of 8) 94042 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-38 chr2 132145018 132145300 + 2.09384600808989 NA promoter-TSS (NM_018824) promoter-TSS (NM_018824) -51 NM_018824 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-80 chr8 14917227 14917420 + 2.09384600808989 NA intron (NM_001037736, intron 1 of 27) intron (NM_001037736, intron 1 of 27) 5660 NM_001037736 234094 Mm.240298 NM_172751 ENSMUSG00000071176 Arhgef10 6430549H08Rik|mKIAA0294 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-13 chr13 32885375 32885585 + 2.09384600808989 NA intron (NM_173051, intron 4 of 6) intron (NM_173051, intron 4 of 6) 12660 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-6 chr14 31418706 31418920 + 2.09384600808989 NA intron (NM_011894, intron 2 of 8) intron (NM_011894, intron 2 of 8) -1136 NM_001347585 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-66 chr5 96979641 96979858 + 2.09384600808989 NA Intergenic Intergenic -17940 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-12 chr12 102599240 102599461 + 2.09384600808989 NA intron (NM_172584, intron 4 of 9) intron (NM_172584, intron 4 of 9) 44409 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-81 chr8 104345667 104345879 + 2.09384600808989 NA intron (NM_024217, intron 4 of 4) B1F|SINE|Alu 5179 NM_024217 68119 Mm.390108 NM_024217 ENSMUSG00000031875 Cmtm3 9430096L06Rik|AI413895|BNAS2|Cklfsf3 CKLF-like MARVEL transmembrane domain containing 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-70 chr6 31115068 31115292 + 2.09384600808989 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -52087 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-59 chr4 130750115 130750341 + 2.09384600808989 NA TTS (NR_028565) TTS (NR_028565) 590 NR_028565 100217460 NR_028565 ENSMUSG00000065196 Snord85 MBII-251|Z50 small nucleolar RNA, C/D box 85 snoRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-61 chr5 64199275 64199495 + 2.09384600808989 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -30972 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-52 chr3 126284693 126284977 + 2.09384600808989 NA Intergenic Intergenic -79017 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-25 chr16 34372799 34373002 + 2.09384600808989 NA intron (NM_177357, intron 3 of 59) intron (NM_177357, intron 3 of 59) 141127 NM_001164268 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-63 chr5 76418471 76418668 + 2.09384600808989 NA Intergenic Intergenic -54792 NM_019515 56183 Mm.154879 NM_019515 ENSMUSG00000029236 Nmu - neuromedin U protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-42 chr3 63822363 63822702 + 2.09384600808989 NA intron (NM_183191, intron 1 of 22) (TC)n|Simple_repeat|Simple_repeat 28459 NM_001177733 269437 Mm.316391 NM_183191 ENSMUSG00000036834 Plch1 BC042549|PLC-eta-1|PLCeta1|Plcl3 phospholipase C, eta 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-85 chr9 25258382 25258720 + 2.09384600808989 NA intron (NM_001359738, intron 1 of 12) intron (NM_001359738, intron 1 of 12) 5659 NM_001359738 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-39 chr2 151986477 151986673 + 2.09384600808989 NA Intergenic Intergenic -6356 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-69 chr5 137010526 137010722 + 2.09384600808989 NA Intergenic Intergenic 19191 NR_030483 735283 NR_030483 ENSMUSG00000076240 Mir702 Mirn702|mir-702|mmu-mir-702 microRNA 702 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-21 chr15 13360750 13360943 + 2.09384600808989 NA Intergenic Intergenic -187171 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-18 chr14 54463257 54463521 + 2.09384600808989 NA promoter-TSS (NM_022993) promoter-TSS (NM_022993) -758 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-49 chr3 109169321 109169691 + 2.09384600808989 NA Intergenic Intergenic 46357 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-6 chr10 82127444 82127702 + 2.09384600808989 NA promoter-TSS (NM_001163064) promoter-TSS (NM_001163064) -440 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-27 chr16 92558324 92558522 + 2.09384600808989 NA Intergenic MTD|LTR|ERVL-MaLR 60276 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989 chr1 59433015 59433254 + 2.09384600808989 NA Intergenic Intergenic -49013 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-74 chr6 91177809 91178036 + 2.09384600808989 NA Intergenic Intergenic 21107 NM_144919 232232 Mm.206218 NM_144919 ENSMUSG00000034245 Hdac11 - histone deacetylase 11 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-20 chr14 105678635 105678850 + 2.09384600808989 NA Intergenic Intergenic -54972 NR_105814 102465207 NR_105814 ENSMUSG00000098780 Mir6390 Gm27562|mmu-mir-6390 microRNA 6390 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-33 chr18 80527232 80527438 + 2.09384600808989 NA Intergenic Intergenic 17211 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-5 chr10 67528427 67528649 + 2.09384600808989 NA Intergenic Intergenic -9331 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-35 chr2 36236474 36236673 + 2.09384600808989 NA intron (NM_008969, intron 2 of 10) intron (NM_008969, intron 2 of 10) 6147 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-41 chr3 61467222 61467478 + 2.09384600808989 NA Intergenic Intergenic 102843 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-29 chr17 34967571 34967794 + 2.09384600808989 NA Intergenic Intergenic 4474 NM_010479 193740 Mm.6388 NM_010479 ENSMUSG00000091971 Hspa1a Hsp70-3|Hsp70.3|Hsp72|hsp68|hsp70A1 heat shock protein 1A protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-72 chr6 50407832 50408101 + 2.09384600808989 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -25129 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-15 chr13 72209636 72209847 + 2.09384600808989 NA Intergenic Intergenic -246018 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-54 chr4 45466433 45466652 + 2.09384600808989 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -57776 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-37 chr2 117899320 117899524 + 2.09384600808989 NA intron (NR_040631, intron 3 of 5) intron (NR_040631, intron 3 of 5) 77494 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-47 chr3 104234624 104234825 + 2.09384600808989 NA Intergenic Intergenic -14318 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-36 chr2 71625406 71625672 + 2.09384600808989 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -78785 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-3 chr10 19459701 19459927 + 2.09384600808989 NA Intergenic Intergenic -26901 NR_152784 102635880 Mm.331974 NR_152784 ENSMUSG00000110902 Gm33104 - predicted gene, 33104 ncRNA unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-32 chr18 70834597 70834854 + 2.09384600808989 NA Intergenic Intergenic 266433 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-65 chr5 92850197 92850462 + 2.09384600808989 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 40947 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-11 chr11 88186925 88187135 + 2.09384600808989 NA intron (NM_001172099, intron 5 of 9) intron (NM_001172099, intron 5 of 9) -7076 NM_001291270 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-17 chr13 94142911 94143121 + 2.09384600808989 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 85220 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-22 chr15 77194021 77194237 + 2.09384600808989 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) -40284 NM_001358771 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-7 chr10 116264684 116264886 + 2.09384600808989 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -36589 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-10 chr18 54901258 54901523 + 2.09384600808989 NA intron (NM_001360787, intron 2 of 8) intron (NM_001360787, intron 2 of 8) 88790 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-89 chr9 108951429 108951648 + 2.09384600808989 NA Intergenic Intergenic -2207 NM_007738 12836 Mm.6200 NM_007738 ENSMUSG00000025650 Col7a1 AW209154 collagen, type VII, alpha 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-83 chr8 127182354 127182620 + 2.09384600808989 NA intron (NM_001122850, intron 2 of 15) intron (NM_001122850, intron 2 of 15) -117125 NM_001013581 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-71 chr6 37735459 37735656 + 2.09384600808989 NA Intergenic Intergenic -135254 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-60 chr4 152327560 152327750 + 2.09384600808989 NA intron (NM_001277113, intron 2 of 3) intron (NM_001277113, intron 2 of 3) 1929 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-2 chr1 129461790 129462083 + 2.09384600808989 NA intron (NM_172485, intron 2 of 27) intron (NM_172485, intron 2 of 27) 188632 NM_172485 210417 Mm.380518 NM_172485 ENSMUSG00000042581 Thsd7b 1700074E13Rik|B930082A18|D130067I03Rik thrombospondin, type I, domain containing 7B protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-11 chr3 129214496 129214779 + 2.09384600808989 NA exon (NM_001042502, exon 1 of 3) exon (NM_001042502, exon 1 of 3) 705 NM_001042502 18741 Mm.246804 NM_011098 ENSMUSG00000028023 Pitx2 9430085M16Rik|Brx1|Brx1b|Munc30|Otlx2|Ptx2|Rieg paired-like homeodomain transcription factor 2 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-2 chr1 132234823 132235027 + 2.09384600808989 NA intron (NM_001311104, intron 4 of 4) intron (NM_001311104, intron 4 of 4) 8611 NR_132336 213409 Mm.426321 NM_001033250 ENSMUSG00000079330 Lemd1 4930540I23Rik|6430514M23Rik|AI428128|LEMP-1 LEM domain containing 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-58 chr4 105218497 105218744 + 2.09384600808989 NA intron (NM_080555, intron 4 of 5) intron (NM_080555, intron 4 of 5) 61273 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-24 chr16 14380338 14380546 + 2.09384600808989 NA intron (NM_008576, intron 1 of 30) intron (NM_008576, intron 1 of 30) 18884 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-43 chr3 68823711 68823908 + 2.09384600808989 NA Intergenic Intergenic -45777 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-7 chr15 58547941 58548149 + 2.09384600808989 NA Intergenic Intergenic 132577 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding unique_peak2_1_10_-2.70822663569977_2.10531830078741_2.09384600808989-13 chr6 21823678 21823886 + 2.09384600808989 NA intron (NM_173007, intron 5 of 8) intron (NM_173007, intron 5 of 8) 28733 NM_173007 269831 Mm.21950 NM_173007 ENSMUSG00000029669 Tspan12 9030619E17|AI426782|AI663988|AW111457|Tm4sf12 tetraspanin 12 protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-84 chr9 20898828 20899055 + 2.09384600808989 NA promoter-TSS (NM_016876) promoter-TSS (NM_016876) -351 NM_016876 53356 Mm.427309 NM_016876 ENSMUSG00000070319 Eif3g 44kDa|D0Jmb4|Eif3s4|TU-189B2|eIF3-p44|p44 eukaryotic translation initiation factor 3, subunit G protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-56 chr4 56504692 56504904 + 2.09384600808989 NA Intergenic Intergenic 236627 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-68 chr5 135171042 135171274 + 2.09384600808989 NA exon (NM_009745, exon 2 of 6) exon (NM_009745, exon 2 of 6) 2786 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding unique_peak1_11_2_1.73296812529734_2.45144656336983_2.09384600808989-77 chr6 134520657 134520900 + 2.09384600808989 NA intron (NM_008514, intron 2 of 22) intron (NM_008514, intron 2 of 22) 46135 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-6 chr8 109142868 109143440 + 2.08778000015696 NA intron (NR_126329, intron 2 of 9) intron (NR_126329, intron 2 of 9) 67932 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA unique_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696-3 chr12 99361032 99361748 + 2.08778000015696 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 88684 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-3 chr11 88235515 88235844 + 2.08778000015696 NA Intergenic Intergenic 31291 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding unique_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696-5 chr5 111207122 111208151 + 2.08778000015696 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -123061 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-2 chr1 134419144 134420016 + 2.08778000015696 NA intron (NM_001306069, intron 1 of 7) intron (NM_001306069, intron 1 of 7) 3916 NM_001306069 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-7 chr9 88268828 88269431 + 2.08778000015696 NA Intergenic Intergenic -58480 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-4 chr3 21407461 21407835 + 2.08778000015696 NA Intergenic Intergenic -669004 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696-6 chr6 47685959 47686226 + 2.08778000015696 NA promoter-TSS (NR_002841).8 promoter-TSS (NR_002841).8 -716 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_41_15_1.11253469601938_4.55626734800969_2.08778000015696 chr2 151914521 151914774 + 2.08778000015696 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 3440 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding unique_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696-2 chr12 35832647 35833185 + 2.08778000015696 NA Intergenic Intergenic -92705 NM_207531 403205 Mm.190508 NM_207531 ENSMUSG00000036231 Agr3 BCMP11|E030025L21Rik|Gm888 anterior gradient 3 protein-coding common_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696 chr2 118043609 118044345 + 2.08778000015696 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 67225 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696 chr1 71893124 71893581 + 2.08778000015696 NA Intergenic Intergenic 5240 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696 chr11 95009450 95010184 + 2.08778000015696 NA promoter-TSS (NM_146025) promoter-TSS (NM_146025) -62 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding unique_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696-4 chr19 5057127 5057545 + 2.08778000015696 NA TTS (NM_145495) TTS (NM_145495) 6528 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-2 chr9 107618940 107619579 + 2.08778000015696 NA intron (NM_008138, intron 4 of 8) intron (NM_008138, intron 4 of 8) -10018 NM_001291539 20347 Mm.4083 NM_009153 ENSMUSG00000057969 Sema3b SemA|Semaa|sema5|semaV sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B protein-coding unique_peak1_41_15_1.11253469601938_4.55626734800969_2.08778000015696-5 chr7 143822197 143822818 + 2.08778000015696 NA promoter-TSS (NM_007856) promoter-TSS (NM_007856) 345 NM_001308095 78914 Mm.35104 NM_030221 ENSMUSG00000031090 Nadsyn1 9130012B15Rik NAD synthetase 1 protein-coding common_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696-2 chr13 49213008 49213474 + 2.08778000015696 NA intron (NM_026738, intron 1 of 5) intron (NM_026738, intron 1 of 5) 2785 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak1_42_15_1.14624253020943_4.57312126510472_2.08778000015696 chr11 96944248 96944738 + 2.08778000015696 NA promoter-TSS (NM_134021) promoter-TSS (NM_134021) 347 NR_003293 319371 Mm.436865 NR_003293 ENSMUSG00000078700 D030028A08Rik - RIKEN cDNA D030028A08 gene ncRNA unique_peak2_17_35_-1.27115877319636_4.53434561484413_2.08778000015695 chr15 77833130 77833733 + 2.08778000015695 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 8744 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_17_35_-1.27115877319636_4.53434561484413_2.08778000015695-2 chr19 10094363 10095039 + 2.08778000015695 NA intron (NM_019699, intron 1 of 11) intron (NM_019699, intron 1 of 11) 6802 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak2_17_35_-1.27115877319636_4.53434561484413_2.08778000015695-3 chr7 4995528 4996012 + 2.08778000015695 NA intron (NM_026741, intron 1 of 1) intron (NM_026741, intron 1 of 1) 331 NM_026741 68490 Mm.76400 NM_026741 ENSMUSG00000051550 Zfp579 1110003A17Rik|Znf579 zinc finger protein 579 protein-coding unique_peak1_45_17_1.07292830035394_4.70638915161928_2.08714016986897 chr11 76135967 76136423 + 2.08714016986897 NA intron (NM_026664, intron 6 of 21) intron (NM_026664, intron 6 of 21) 43435 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_45_17_1.07292830035394_4.70638915161928_2.08714016986897 chr1 176831576 176832031 + 2.08714016986897 NA intron (NM_001357390, intron 5 of 18) intron (NM_001357390, intron 5 of 18) 4330 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak1_45_17_1.07292830035394_4.70638915161928_2.08714016986897-3 chr6 118455416 118455807 + 2.08714016986897 NA promoter-TSS (NM_028335) promoter-TSS (NM_028335) -105 NM_001361899 72720 Mm.212572 NM_028335 ENSMUSG00000030145 Zfp248 2810037F07Rik|E130106N01Rik zinc finger protein 248 protein-coding common_peak1_45_17_1.07292830035394_4.70638915161928_2.08714016986897-2 chr14 78848753 78849533 + 2.08714016986897 NA promoter-TSS (NM_173758) promoter-TSS (NM_173758) -35 NM_027906 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding unique_peak1_45_17_1.07292830035394_4.70638915161928_2.08714016986897-2 chr9 64702143 64702734 + 2.08714016986897 NA intron (NM_001134399, intron 23 of 24) intron (NM_001134399, intron 23 of 24) 35318 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896-3 chr12 104864407 104864906 + 2.08714016986896 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 420 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896-4 chr6 117438095 117438634 + 2.08714016986896 NA Intergenic Intergenic -56871 NR_152214 100126203 Mm.217172 NR_152214 6820426E19Rik Gm43983 RIKEN cDNA 6820426E19 gene ncRNA unique_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896-3 chr18 54990406 54991164 + 2.08714016986896 NA promoter-TSS (NM_175751) promoter-TSS (NM_175751) -605 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896 chr11 118401239 118401847 + 2.08714016986896 NA intron (NM_011150, intron 1 of 5) intron (NM_011150, intron 1 of 5) 416 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding unique_peak2_19_38_-1.23570527589057_4.66754958091696_2.08714016986896 chr9 122805611 122806024 + 2.08714016986896 NA intron (NM_001013405, intron 1 of 10) CpG 270 NM_001013405 382117 Mm.215892 NM_001013405 ENSMUSG00000046603 Tcaim D9Ertd402e|Gm1129|TOAG-1 T cell activation inhibitor, mitochondrial protein-coding common_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896 chr11 62086417 62087111 + 2.08714016986896 NA intron (NM_001029936, intron 1 of 12) intron (NM_001029936, intron 1 of 12) 9740 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896-2 chr11 88525696 88526044 + 2.08714016986896 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -93381 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_20_38_-1.16581254326962_4.70249594722744_2.08714016986896-2 chr15 81663967 81664597 + 2.08714016986896 NA intron (NM_001289711, intron 1 of 17) intron (NM_001289711, intron 1 of 17) 393 NR_110362 214669 Mm.280768 NM_145993 ENSMUSG00000022394 L3mbtl2 4732493N06Rik|M4mbt L3MBTL2 polycomb repressive complex 1 subunit protein-coding common_peak2_19_38_-1.23570527589057_4.66754958091696_2.08714016986896 chr12 79472222 79472635 + 2.08714016986896 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 175077 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_94_118_-0.613052389582163_6.58829156851686_2.08617503191531 chr1 132288475 132290288 + 2.08617503191531 NA Intergenic Intergenic -9245 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_107_54_0.684132157802255_6.12342579242579_2.08608265721042-2 chr3 102363474 102364328 + 2.08608265721042 NA Intergenic Intergenic 101496 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA common_peak2_106_54_0.670806323504499_6.11676287527691_2.08608265721042 chr7 24530743 24531646 + 2.08608265721042 NA intron (NM_153134, intron 1 of 2) B1_Mur1|SINE|Alu 546 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding common_peak1_107_54_0.684132157802255_6.12342579242579_2.08608265721042 chr11 96290714 96292253 + 2.08608265721042 NA intron (NR_131758, intron 2 of 2) intron (NR_131758, intron 2 of 2) 4837 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak2_105_129_-0.583652737331838_6.73054144436253_2.08574641690569-2 chr5 32194678 32196817 + 2.08574641690569 NA Intergenic Intergenic -36961 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak2_105_129_-0.583652737331838_6.73054144436253_2.08574641690569 chr17 35134822 35136290 + 2.08574641690569 NA promoter-TSS (NM_001252469) promoter-TSS (NM_001252469) -158 NM_001252469 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding common_peak1_95_47_0.711803186577606_5.94086409400996_2.08526029943626 chr10 80899853 80900740 + 2.08526029943626 NA TTS (NM_001081688) TTS (NM_001081688) 673 NM_013895 30055 Mm.142132 NM_013895 ENSMUSG00000020219 Timm13 D10Ertd378e|Tim9|Timm9 translocase of inner mitochondrial membrane 13 protein-coding common_peak1_95_47_0.711803186577606_5.94086409400996_2.08526029943626-2 chr2 119897247 119898208 + 2.08526029943626 NA intron (NM_013720, intron 1 of 23) intron (NM_013720, intron 1 of 23) 499 NM_013720 29808 Mm.87532 NM_013720 ENSMUSG00000033943 Mga AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5 MAX gene associated protein-coding common_peak1_156_178_-0.48239846623985_7.24261654414433_2.08308869138905 chr15 38923381 38924256 + 2.08308869138905 NA Intergenic Intergenic -10091 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_156_178_-0.48239846623985_7.24261654414433_2.08308869138905 chr11 53796082 53797559 + 2.08308869138905 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 26347 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_112_135_-0.557140139590087_6.8088927714553_2.08050829116574 chr12 80220114 80221572 + 2.08050829116574 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 39528 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_137_74_0.587815233954585_6.52272630747317_2.08027013622182-2 chr11 102406809 102408480 + 2.08027013622182 NA promoter-TSS (NM_026542) promoter-TSS (NM_026542) -127 NM_026542 68066 Mm.44226 NM_026542 ENSMUSG00000018677 Slc25a39 3010027G13Rik|D11Ertd333e solute carrier family 25, member 39 protein-coding common_peak1_137_74_0.587815233954585_6.52272630747317_2.08027013622182 chr1 138618217 138620051 + 2.08027013622182 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 623 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_288_177_0.399778280342221_7.67562257113751_2.07995098347043 chr8 121897052 121899882 + 2.07995098347043 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 9219 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_113_58_0.660301027837515_6.2127935632806_2.0787781418229 chr11 105180217 105181313 + 2.0787781418229 NA promoter-TSS (NM_001294334) promoter-TSS (NM_001294334) 668 NR_027956 73431 Mm.351426 NM_028539 1700052K11Rik AI840954 RIKEN cDNA 1700052K11 gene ncRNA common_peak2_34_55_-0.9559989295118_5.3293554573017_2.0775794634935 chr12 69884400 69885174 + 2.0775794634935 NA intron (NM_201519, intron 1 of 30) B1_Mus1|SINE|Alu -8318 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding common_peak2_85_108_-0.628996774140737_6.45368593770656_2.0762372064581 chr13 112771683 112773230 + 2.0762372064581 NA Intergenic Intergenic -28321 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak1_151_83_0.562736072619898_6.67368545908871_2.07614821585747 chr5 23434482 23435524 + 2.07614821585747 NA promoter-TSS (NR_040469) promoter-TSS (NR_040469) 574 NM_026984 69188 Mm.205190 NM_026984 ENSMUSG00000029004 Kmt2e 1810033J14Rik|9530077A04Rik|D230038D11Rik|Mll5|NKp44L lysine (K)-specific methyltransferase 2E protein-coding common_peak2_74_98_-0.686222155699847_6.28624554222969_2.07507224370931 chr4 139351604 139352659 + 2.07507224370931 NA promoter-TSS (NM_001039200) promoter-TSS (NM_001039200) 445 NM_001290810 69902 Mm.27871 NM_023536 ENSMUSG00000028741 Mrto4 2610012O22Rik|Mg684|Mrt4 mRNA turnover 4, ribosome maturation factor protein-coding common_peak2_75_98_-0.667248145107707_6.29573254752576_2.07507224370931 chr9 110681145 110682159 + 2.07507224370931 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 25149 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_52_75_-0.802157458173725_5.84684878435672_2.07502359373632 chr13 100832847 100833409 + 2.07502359373632 NA exon (NM_022885, exon 1 of 16) exon (NM_022885, exon 1 of 16) 299 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 protein-coding common_peak1_91_44_0.743945225893336_5.86382570927634_2.07502359373632 chr6 48593963 48594949 + 2.07502359373632 NA intron (NM_001079905, intron 1 of 1) intron (NM_001079905, intron 1 of 1) 573 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak2_90_44_0.728289148126324_5.85599767039284_2.07502359373632 chr7 78782969 78783549 + 2.07502359373632 NA promoter-TSS (NM_023331) promoter-TSS (NM_023331) 128 NM_001360702 67994 Mm.297033 NM_026498 ENSMUSG00000030611 Mrps11 0710005I03Rik|C79873|MRP-S11|S11mt mitochondrial ribosomal protein S11 protein-coding unique_peak1_91_44_0.743945225893336_5.86382570927634_2.07502359373632 chr8 124290115 124290840 + 2.07502359373632 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 59083 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_80_103_-0.647057265013478_6.37691108563435_2.07438007356201 chr8 94874728 94876156 + 2.07438007356201 NA intron (NM_053246, intron 1 of 8) intron (NM_053246, intron 1 of 8) 870 NM_053246 114255 Mm.203949 NM_053246 ENSMUSG00000040631 Dok4 - docking protein 4 protein-coding common_peak2_57_24_0.931056831602542_5.109384605576_2.07189913552604 chr8 49282828 49283216 + 2.07189913552604 NA Intergenic Intergenic -608332 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak1_28_48_-1.0327418431647_5.09833892253286_2.07189913552604 chr1 167270394 167270757 + 2.07189913552604 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 14552 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_58_24_0.955544895547956_5.1216286375487_2.07189913552604 chr19 9954447 9954850 + 2.07189913552604 NA Intergenic Intergenic -25952 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding unique_peak1_58_24_0.955544895547956_5.1216286375487_2.07189913552604 chr1 135760642 135761300 + 2.07189913552604 NA Intergenic PB1D10|SINE|Alu -5114 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding unique_peak1_58_24_0.955544895547956_5.1216286375487_2.07189913552604-2 chr10 6841425 6842340 + 2.07189913552604 NA TTS (NM_001304948) TTS (NM_001304948) 53306 NM_001039652 18390 Mm.438000 NM_011013 ENSMUSG00000000766 Oprm1 M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR opioid receptor, mu 1 protein-coding common_peak1_58_24_0.955544895547956_5.1216286375487_2.07189913552604 chr3 38284256 38284752 + 2.07189913552604 NA Intergenic Intergenic -76385 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_143_166_-0.506103002947835_7.13065279100013_2.07115966764792 chr15 77842562 77843910 + 2.07115966764792 NA Intergenic Intergenic -1061 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_61_84_-0.73894139658492_6.03992023784524_2.07055967366842 chr6 99095284 99096280 + 2.07055967366842 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -67484 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_102_51_0.697147646917135_6.04901354159966_2.07055967366841 chr2 70090065 70091048 + 2.07055967366841 NA intron (NM_177376, intron 2 of 34) intron (NM_177376, intron 2 of 34) 51430 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak2_270_284_-0.371428501582127_7.96910385826104_2.07055579600979 chr15 102013403 102016090 + 2.07055579600979 NA Intergenic C-rich|Low_complexity|Low_complexity -10404 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-18 chr5 136584439 136584714 + 2.07034318903805 NA Intergenic Intergenic -17086 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-8 chr5 151142977 151143461 + 2.07034318903805 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 46974 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805 chr1 156036912 156037301 + 2.07034318903805 NA promoter-TSS (NM_001160018) promoter-TSS (NM_001160018) -626 NM_001160018 208263 Mm.211654 NM_144791 ENSMUSG00000026466 Tor1aip1 LAP1|Lap1B torsin A interacting protein 1 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805 chr11 63115535 63115945 + 2.07034318903805 NA Intergenic Intergenic -13242 NM_001302258 18858 Mm.1237 NM_008885 ENSMUSG00000018217 Pmp22 22kDa|Gas-3|HNPP|TRE002|Tr|trembler peripheral myelin protein 22 protein-coding unique_peak2_8_22_-1.61774074823782_3.7146915819381_2.07034318903805-3 chr17 80891142 80891697 + 2.07034318903805 NA Intergenic ID_B1|SINE|B4 -5374 NR_131128 320784 Mm.474182 NR_131127 ENSMUSG00000112121 C230072F16Rik - RIKEN cDNA C230072F16 gene ncRNA unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-10 chr16 85146754 85146963 + 2.07034318903805 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 26849 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-6 chr11 80532302 80532742 + 2.07034318903805 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -23416 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-7 chr15 99651190 99651516 + 2.07034318903805 NA intron (NM_012025, intron 1 of 17) CpG 303 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding unique_peak2_8_22_-1.61774074823782_3.7146915819381_2.07034318903805 chr13 62835124 62835502 + 2.07034318903805 NA Intergenic Intergenic 23057 NM_007994 14120 Mm.391871 NM_007994 ENSMUSG00000021456 Fbp2 Fbp-1|Fbp1|Rae-30 fructose bisphosphatase 2 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-15 chr2 158219785 158220077 + 2.07034318903805 NA intron (NM_001131021, intron 2 of 15) intron (NM_001131021, intron 2 of 15) 9293 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-17 chr5 65538746 65539326 + 2.07034318903805 NA intron (NM_001310618, intron 1 of 4) intron (NM_001310618, intron 1 of 4) 1791 NM_001310619 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-3 chr1 138603496 138603913 + 2.07034318903805 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 16053 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-21 chr7 68748203 68748524 + 2.07034318903805 NA intron (NM_001042592, intron 1 of 7) intron (NM_001042592, intron 1 of 7) 875 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-4 chr10 95122277 95122692 + 2.07034318903805 NA intron (NR_131146, intron 3 of 3) intron (NR_131146, intron 3 of 3) 23341 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA unique_peak2_8_22_-1.61774074823782_3.7146915819381_2.07034318903805-2 chr17 21534045 21534393 + 2.07034318903805 NA intron (NR_131123, intron 2 of 2) intron (NR_131123, intron 2 of 2) -1320 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-12 chr17 35424987 35425183 + 2.07034318903805 NA intron (NM_207648, intron 1 of 4) CpG 208 NM_207648 110557 Mm.439827 NM_207648 ENSMUSG00000073409 H2-Q6 0610037M15Rik|H-2Q6|Qa-6|Qa6 histocompatibility 2, Q region locus 6 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-6 chr13 52673173 52673434 + 2.07034318903805 NA Intergenic Intergenic 76421 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-9 chr16 8671853 8672167 + 2.07034318903805 NA intron (NM_025821, intron 1 of 3) CpG 143 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805 chr1 36128899 36129261 + 2.07034318903805 NA Intergenic Intergenic 15233 NR_105862 102465540 NR_105862 ENSMUSG00000098752 Mir6897 Gm27652|mmu-mir-6897 microRNA 6897 ncRNA unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-5 chr10 127267481 127267728 + 2.07034318903805 NA intron (NM_001190453, intron 2 of 14) intron (NM_001190453, intron 2 of 14) 1342 NM_001190453 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-20 chr6 100706421 100706708 + 2.07034318903805 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 1830 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-10 chr9 42264161 42264572 + 2.07034318903805 NA promoter-TSS (NM_172769) promoter-TSS (NM_172769) -66 NM_172769 235293 Mm.32700 NM_172769 ENSMUSG00000032018 Sc5d A830037K02|A830073K23Rik|Sc5dl sterol-C5-desaturase protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-13 chr17 79598985 79599234 + 2.07034318903805 NA Intergenic Intergenic -15791 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-5 chr13 17603095 17603516 + 2.07034318903805 NA intron (NM_138654, intron 6 of 13) MIR|SINE|MIR 91460 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805 chr1 136131561 136131923 + 2.07034318903805 NA promoter-TSS (NR_046167) promoter-TSS (NR_046167) 352 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-19 chr6 72475431 72475773 + 2.07034318903805 NA Intergenic Intergenic -36044 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-14 chr19 5727522 5727837 + 2.07034318903805 NA TTS (NM_181452) TTS (NM_181452) -1362 NM_053252 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-4 chr13 16741593 16741943 + 2.07034318903805 NA Intergenic Intergenic -718345 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-2 chr1 43127689 43128059 + 2.07034318903805 NA intron (NM_010212, intron 5 of 5) intron (NM_010212, intron 5 of 5) 29164 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding unique_peak2_8_22_-1.61774074823782_3.7146915819381_2.07034318903805-4 chr2 130871751 130871978 + 2.07034318903805 NA TTS (NR_015523) TTS (NR_015523) -31719 NM_029432 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-11 chr16 98081744 98082000 + 2.07034318903805 NA intron (NR_015491, intron 1 of 4) intron (NR_015491, intron 1 of 4) 567 NR_015491 320586 Mm.442230 NR_015491 A630089N07Rik - RIKEN cDNA A630089N07 gene ncRNA unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-7 chr13 43032155 43032385 + 2.07034318903805 NA intron (NM_001005740, intron 2 of 12) intron (NM_001005740, intron 2 of 12) -90569 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_8_22_-1.61774074823782_3.7146915819381_2.07034318903805-5 chr4 104987782 104988016 + 2.07034318903805 NA intron (NR_104376, intron 6 of 20) intron (NR_104376, intron 6 of 20) 74443 NM_001285952 242594 Mm.65181 NM_001162980 ENSMUSG00000078612 Fyb2 1700024P16Rik|ARAP|C1orf168|Gm620 FYN binding protein 2 protein-coding common_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-2 chr2 35258353 35258665 + 2.07034318903805 NA intron (NM_001206368, intron 1 of 16) intron (NM_001206368, intron 1 of 16) 2150 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-8 chr13 70839564 70840039 + 2.07034318903805 NA intron (NM_172053, intron 2 of 22) intron (NM_172053, intron 2 of 22) 2010 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-3 chr11 110815410 110815725 + 2.07034318903805 NA Intergenic Intergenic -152466 NM_010604 16517 Mm.30176 NM_010604 ENSMUSG00000051497 Kcnj16 6430410F18Rik|AI132396|Kir5.1 potassium inwardly-rectifying channel, subfamily J, member 16 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-2 chr11 68457926 68458235 + 2.07034318903805 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 25955 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik|Foap2|p101 phosphoinositide-3-kinase regulatory subunit 5 protein-coding unique_peak2_7_22_-1.78646693226597_3.63032848992403_2.07034318903805-9 chr7 27256403 27256650 + 2.07034318903805 NA intron (NM_133770, intron 13 of 14) intron (NM_133770, intron 13 of 14) -2235 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding unique_peak1_26_7_1.4796018304734_3.7398009152367_2.07034318903805-16 chr3 57547101 57547411 + 2.07034318903805 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 28620 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding unique_peak2_8_22_-1.61774074823782_3.7146915819381_2.07034318903805-6 chr5 100637590 100638073 + 2.07034318903805 NA Intergenic Intergenic 36425 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak2_106_130_-0.581256964508292_6.7427945192833_2.06916439371166 chr9 98274104 98275096 + 2.06916439371166 NA Intergenic MIR3|SINE|MIR -21970 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_158_88_0.543817246957674_6.74764205444523_2.06916439371166 chr3 95105967 95106813 + 2.06916439371166 NA exon (NM_008847, exon 1 of 15) exon (NM_008847, exon 1 of 15) 540 NM_008847 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak1_165_186_-0.465625818569962_7.31408155060265_2.06800957319634 chr12 76369963 76371719 + 2.06800957319634 NA intron (NM_178744, intron 1 of 1) CpG-3289 575 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding common_peak2_86_41_0.76343120082596_5.77403302319174_2.06745185553308 chr19 5430237 5431060 + 2.06745185553308 NA Intergenic Intergenic 5504 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_86_41_0.76343120082596_5.77403302319174_2.06745185553308 chr11 102555323 102556058 + 2.06745185553308 NA intron (NM_001159492, intron 1 of 7) intron (NM_001159492, intron 1 of 7) 468 NM_001159492 237943 Mm.260282 NM_001159492 ENSMUSG00000034621 Gpatch8 5430405G24Rik|AU018890|Fbm1|Gpatc8|mKIAA0553 G patch domain containing 8 protein-coding common_peak2_38_59_-0.90051681892595_5.45663218614554_2.06706089299028 chr13 110925129 110926018 + 2.06706089299028 NA Intergenic Intergenic -21727 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_38_59_-0.90051681892595_5.45663218614554_2.06706089299028-2 chr6 87225779 87226596 + 2.06706089299028 NA intron (NM_054041, intron 12 of 17) intron (NM_054041, intron 12 of 17) 109588 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding common_peak1_71_32_0.840262149741007_5.46452519422896_2.06706089299027-3 chr6 17487497 17488621 + 2.06706089299027 NA intron (NM_008591, intron 2 of 21) intron (NM_008591, intron 2 of 21) 24102 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_71_32_0.840262149741007_5.46452519422896_2.06706089299027 chr1 71879814 71880617 + 2.06706089299027 NA Intergenic Intergenic -7897 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_71_32_0.840262149741007_5.46452519422896_2.06706089299027-2 chr13 54564823 54565348 + 2.06706089299027 NA intron (NM_133797, intron 1 of 8) CpG 297 NM_001252647 97820 Mm.24593 NM_133797 ENSMUSG00000025871 4833439L19Rik 4930558H15Rik|C81457|Kiaa1191|P33monox RIKEN cDNA 4833439L19 gene protein-coding unique_peak1_71_32_0.840262149741007_5.46452519422896_2.06706089299027 chr3 86223667 86224617 + 2.06706089299027 NA promoter-TSS (NM_030695) promoter-TSS (NM_030695) -548 NM_030695 80877 Mm.439825 NM_030695 ENSMUSG00000028080 Lrba C80285|D3Ertd775e|Lab300|Lba LPS-responsive beige-like anchor protein-coding common_peak2_151_173_-0.487890000450069_7.19899849562369_2.06453806205309 chr8 24568913 24571367 + 2.06453806205309 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 6193 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_188_108_0.498966596124119_7.01766762283899_2.06390713525969 chr9 58554065 58555809 + 2.06390713525969 NA Intergenic CpG -13997 NM_133983 102657 Mm.5356 NM_133983 ENSMUSG00000035914 Cd276 6030411F23Rik|AU016588|B7RP-2|B7h3 CD276 antigen protein-coding common_peak1_81_38_0.785557348738189_5.67818089323134_2.06309159043266-2 chr5 110269255 110269857 + 2.06309159043266 NA intron (NM_028273, intron 1 of 5) CpG 343 NM_028273 72542 Mm.61682 NM_028273 ENSMUSG00000029500 Pgam5 2610528A17Rik phosphoglycerate mutase family member 5 protein-coding common_peak2_81_38_0.785557348738189_5.67818089323134_2.06309159043266 chr3 87158275 87158636 + 2.06309159043266 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 16292 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_81_38_0.785557348738189_5.67818089323134_2.06309159043266 chr11 113264216 113265191 + 2.06309159043266 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -55034 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA common_peak1_41_63_-0.88746530398062_5.55626734800969_2.06265032070494 chr2 26902296 26902766 + 2.06265032070494 NA intron (NM_009298, intron 1 of 4) intron (NM_009298, intron 1 of 4) 356 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding common_peak1_42_63_-0.853757469790568_5.57312126510472_2.06265032070494 chr11 70192989 70193356 + 2.06265032070494 NA Intergenic Intergenic -20738 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_42_63_-0.853757469790568_5.57312126510472_2.06265032070494 chr4 106839153 106839844 + 2.06265032070494 NA Intergenic CpG -34491 NM_001347159 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_41_63_-0.88746530398062_5.55626734800969_2.06265032070494 chr8 25017317 25017826 + 2.06265032070494 NA promoter-TSS (NM_007404) promoter-TSS (NM_007404) 360 NM_027194 69742 Mm.28626 NM_027194 ENSMUSG00000031556 Tm2d2 2410018G23Rik|Blp1 TM2 domain containing 2 protein-coding unique_peak1_76_35_0.810909450728877_5.57537972680675_2.06265032070493-2 chr13 99446397 99447591 + 2.06265032070493 NA intron (NM_008634, intron 2 of 6) intron (NM_008634, intron 2 of 6) -34168 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA common_peak2_76_35_0.810909450728877_5.57537972680675_2.06265032070493 chr2 157451957 157452560 + 2.06265032070493 NA intron (NM_001025395, intron 2 of 13) MIR|SINE|MIR 27965 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak1_76_35_0.810909450728877_5.57537972680675_2.06265032070493 chr5 111228645 111229739 + 2.06265032070493 NA intron (NM_001267622, intron 8 of 22) intron (NM_001267622, intron 8 of 22) -101505 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak1_76_35_0.810909450728877_5.57537972680675_2.06265032070493 chr11 100393182 100394177 + 2.06265032070493 NA intron (NM_010593, intron 1 of 13) intron (NM_010593, intron 1 of 13) 4111 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak2_119_142_-0.543448750725748_6.88814696141552_2.06263126449253 chr16 11008243 11009472 + 2.06263126449253 NA promoter-TSS (NR_040518) promoter-TSS (NR_040518) -41 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-15 chr9 103366183 103366491 + 2.06249767704514 NA promoter-TSS (NM_001134426) promoter-TSS (NM_001134426) -557 NM_175565 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514 chr17 26534209 26534587 + 2.06249767704514 NA Intergenic Intergenic -25926 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514-4 chr17 31789487 31789808 + 2.06249767704514 NA Intergenic Intergenic 66157 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-16 chrX 7789276 7789939 + 2.06249767704514 NA promoter-TSS (NM_001290455) promoter-TSS (NM_001290455) -386 NM_001290455 54645 Mm.194811 NM_207670 ENSMUSG00000031153 Gripap1 AI854681|DXImx47e|GRASP-1|Sfc10|mKIAA1167 GRIP1 associated protein 1 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-5 chr17 35902926 35903227 + 2.06249767704514 NA intron (NM_001347378, intron 7 of 11) intron (NM_001347378, intron 7 of 11) -5698 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding unique_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514-3 chr16 14705928 14706199 + 2.06249767704514 NA intron (NM_011415, intron 1 of 2) CpG 204 NM_011415 20583 Mm.4272 NM_011415 ENSMUSG00000022676 Snai2 Slug|Slugh|Snail2 snail family zinc finger 2 protein-coding unique_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514-2 chr13 34234853 34235175 + 2.06249767704514 NA intron (NM_001033167, intron 3 of 10) intron (NM_001033167, intron 3 of 10) 72050 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-2 chr11 79641706 79642075 + 2.06249767704514 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -18727 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-3 chr12 104803216 104803833 + 2.06249767704514 NA intron (NM_001040682, intron 2 of 12) intron (NM_001040682, intron 2 of 12) -51572 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-10 chr3 151431857 151432196 + 2.06249767704514 NA Intergenic Intergenic -5856 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-13 chr8 95221075 95221481 + 2.06249767704514 NA Intergenic Lx5|LINE|L1 -78738 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514 chr1 40175805 40176271 + 2.06249767704514 NA Intergenic Intergenic -49042 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-6 chr17 43568805 43569145 + 2.06249767704514 NA intron (NM_013737, intron 1 of 11) intron (NM_013737, intron 1 of 11) 524 NM_013737 27226 Mm.9277 NM_013737 ENSMUSG00000023913 Pla2g7 PAF-AH|R75400 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-12 chr6 89469540 89470062 + 2.06249767704514 NA intron (NM_025351, intron 4 of 7) intron (NM_025351, intron 4 of 7) -107188 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-9 chr3 137865082 137865450 + 2.06249767704514 NA intron (NM_016750, intron 2 of 4) CpG-9623 779 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding unique_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514 chr10 17566758 17567195 + 2.06249767704514 NA Intergenic Intergenic -156252 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-8 chr3 57554001 57554446 + 2.06249767704514 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 21653 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514 chr11 99582036 99582384 + 2.06249767704514 NA TTS (NM_001039502) TTS (NM_001039502) -1194 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-14 chr9 18291636 18291974 + 2.06249767704514 NA promoter-TSS (NM_025844) promoter-TSS (NM_025844) -462 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding common_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514-2 chr3 67463045 67463290 + 2.06249767704514 NA intron (NM_016753, intron 1 of 5) intron (NM_016753, intron 1 of 5) 740 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-4 chr14 50895673 50896140 + 2.06249767704514 NA Intergenic Intergenic -2651 NM_001166651 546611 Mm.390692 NM_001166651 ENSMUSG00000090799 Klhl33 EG546611 kelch-like 33 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-11 chr5 38554384 38554817 + 2.06249767704514 NA intron (NM_011715, intron 2 of 14) intron (NM_011715, intron 2 of 14) 6995 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding unique_peak1_32_10_1.30763436576046_4.11324880151753_2.06249767704514-7 chr19 7457312 7457555 + 2.06249767704514 NA exon (NM_001271486, exon 3 of 9) exon (NM_001271486, exon 3 of 9) 25858 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding unique_peak2_11_27_-1.48942429603911_4.06264277403805_2.06249767704514-5 chr5 31699301 31699881 + 2.06249767704514 NA intron (NM_181280, intron 1 of 12) intron (NM_181280, intron 1 of 12) 1541 NM_144541 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Babam2 6030405P19Rik|AI429776|B830038C02Rik|Bre BRISC and BRCA1 A complex member 2 protein-coding common_peak1_90_114_-0.625347806488376_6.53281614770019_2.06116599414861 chr1 82839458 82840536 + 2.06116599414861 NA intron (NM_001310713, intron 1 of 11) CpG 537 NM_001347077 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_102_125_-0.57969255844169_6.68743364427907_2.0589369474309 chr9 98274160 98274992 + 2.0589369474309 NA Intergenic MIR3|SINE|MIR -21994 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak1_97_48_0.711593319677602_5.97050650395401_2.0567716791101-2 chr9 110624568 110625378 + 2.0567716791101 NA promoter-TSS (NM_026012) promoter-TSS (NM_026012) -580 NM_026012 67169 Mm.46680 NM_026012 ENSMUSG00000032491 Nradd 2610311B09Rik|BB104149|NRDD|NRH2|PLAIDD neurotrophin receptor associated death domain protein-coding common_peak1_97_48_0.711593319677602_5.97050650395401_2.0567716791101 chr11 109610194 109611343 + 2.0567716791101 NA intron (NM_145940, intron 1 of 12) intron (NM_145940, intron 1 of 12) 621 NM_145940 52639 Mm.35817 NM_145940 ENSMUSG00000041895 Wipi1 4930533H01Rik|AW411817|D11Ertd498e WD repeat domain, phosphoinositide interacting 1 protein-coding common_peak2_97_48_0.711593319677602_5.97050650395401_2.0567716791101 chr6 92214281 92214872 + 2.0567716791101 NA intron (NM_030081, intron 1 of 11) CpG 235 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding common_peak1_133_71_0.604573036624831_6.47221151975473_2.05620933116779 chr12 31270308 31271508 + 2.05620933116779 NA intron (NM_008482, intron 3 of 32) intron (NM_008482, intron 3 of 32) 5614 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_132_71_0.593842523103721_6.46684626299417_2.05620933116779 chr19 4232408 4233532 + 2.05620933116779 NA intron (NR_132280, intron 2 of 2) intron (NR_132280, intron 2 of 2) 555 NR_132280 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-18 chr8 106742146 106742418 + 2.05605744720049 NA exon (NM_173037, exon 13 of 18) exon (NM_173037, exon 13 of 18) 59214 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-48 chr6 112249317 112249519 + 2.05605744720049 NA Intergenic Intergenic -24340 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-61 chr9 103084626 103084839 + 2.05605744720049 NA intron (NM_033314, intron 12 of 13) intron (NM_033314, intron 12 of 13) -27342 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-2 chr1 81633054 81633266 + 2.05605744720049 NA Intergenic Intergenic -498756 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-37 chr4 42953985 42954197 + 2.05605744720049 NA intron (NM_001355439, intron 3 of 4) intron (NM_001355439, intron 3 of 4) 3695 NM_001355440 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-43 chr4 106600552 106600773 + 2.05605744720049 NA intron (NR_149753, intron 9 of 10) intron (NR_149753, intron 9 of 10) 16576 NR_149753 242602 Mm.235591 NM_183182 ENSMUSG00000054362 Lexm - lymphocyte expansion molecule protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-60 chr9 57417131 57417340 + 2.05605744720049 NA intron (NR_152146, intron 4 of 5) intron (NR_152146, intron 4 of 5) 22501 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-40 chr4 84037356 84037550 + 2.05605744720049 NA Intergenic Intergenic 7426 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-5 chr10 45077697 45077920 + 2.05605744720049 NA intron (NM_011156, intron 2 of 14) intron (NM_011156, intron 2 of 14) 10594 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-34 chr3 146044314 146044560 + 2.05605744720049 NA intron (NM_172864, intron 21 of 22) B1_Mus2|SINE|Alu 56567 NM_001166064 214804 Mm.268854 NM_001166064 ENSMUSG00000036863 Syde2 C430017H16Rik synapse defective 1, Rho GTPase, homolog 2 (C. elegans) protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-50 chr7 100262984 100263186 + 2.05605744720049 NA exon (NM_027629, exon 9 of 14) exon (NM_027629, exon 9 of 14) -1459 NR_033563 14777 Mm.57225 NR_033563 Gpx2-ps1 AU041318 glutathione peroxidase 2, pseudogene 1 pseudo unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-57 chr9 43778311 43778551 + 2.05605744720049 NA intron (NM_021424, intron 1 of 5) intron (NM_021424, intron 1 of 5) 33855 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-10 chr19 59866860 59867155 + 2.05605744720049 NA Intergenic Intergenic 76357 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-49 chr7 81762550 81762778 + 2.05605744720049 NA promoter-TSS (NM_025997) promoter-TSS (NM_025997) -289 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-21 chr16 65850474 65850673 + 2.05605744720049 NA intron (NM_028572, intron 3 of 3) intron (NM_028572, intron 3 of 3) 34940 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-6 chr13 9325480 9325699 + 2.05605744720049 NA intron (NM_001081426, intron 1 of 36) intron (NM_001081426, intron 1 of 36) 49064 NM_001081426 208440 Mm.217326 NM_172459 ENSMUSG00000048264 Dip2c 2900024P20Rik|9630044M06|mKIAA0934 disco interacting protein 2 homolog C protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-15 chr14 54378115 54378378 + 2.05605744720049 NA intron (NM_011405, intron 5 of 11) intron (NM_011405, intron 5 of 11) 17405 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049 chr1 119636640 119636867 + 2.05605744720049 NA intron (NM_145506, intron 2 of 24) intron (NM_145506, intron 2 of 24) 12247 NM_001113416 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-29 chr3 27155242 27155471 + 2.05605744720049 NA intron (NR_040548, intron 2 of 2) intron (NR_040548, intron 2 of 2) 1330 NR_040548 76657 Mm.417839 NR_040548 ENSMUSG00000097584 1700125G22Rik - RIKEN cDNA 1700125G22 gene ncRNA unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-2 chr1 165370774 165370976 + 2.05605744720049 NA intron (NM_028759, intron 10 of 18) intron (NM_028759, intron 10 of 18) 68252 NM_001310430 240888 Mm.329929 NM_001081126 ENSMUSG00000040836 Gpr161 Gm208|Gm208Gpr|vl G protein-coupled receptor 161 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-17 chr8 45680619 45680842 + 2.05605744720049 NA intron (NM_001310708, intron 1 of 19) intron (NM_001310708, intron 1 of 19) 18737 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-19 chrX 141478471 141478676 + 2.05605744720049 NA intron (NM_007736, intron 2 of 51) MIRb|SINE|MIR 3154 NM_001163155 12830 Mm.286892 NM_007736 ENSMUSG00000031274 Col4a5 - collagen, type IV, alpha 5 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-13 chr14 48227601 48227805 + 2.05605744720049 NA non-coding (NR_003630, exon 3 of 3) non-coding (NR_003630, exon 3 of 3) 28987 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-7 chr15 60091176 60091410 + 2.05605744720049 NA Intergenic Intergenic -74675 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-41 chr4 88956489 88956693 + 2.05605744720049 NA Intergenic Intergenic -14549 NR_132735 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-12 chr4 30659968 30660203 + 2.05605744720049 NA Intergenic PB1D7|SINE|Alu -4511 NR_040655 75332 Mm.108636 NR_040655 4930556G01Rik - RIKEN cDNA 4930556G01 gene ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-35 chr3 151438225 151438433 + 2.05605744720049 NA intron (NM_133222, intron 1 of 15) intron (NM_133222, intron 1 of 15) 447 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-56 chr9 32750959 32751148 + 2.05605744720049 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 55011 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-39 chr4 62675628 62675830 + 2.05605744720049 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 1755 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-44 chr4 136115492 136115793 + 2.05605744720049 NA Intergenic B1_Mus2|SINE|Alu -28180 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-14 chr14 54149147 54149343 + 2.05605744720049 NA Intergenic Intergenic 104684 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-4 chr10 7145623 7145816 + 2.05605744720049 NA intron (NM_172546, intron 4 of 12) intron (NM_172546, intron 4 of 12) 66518 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-59 chr9 51278703 51278899 + 2.05605744720049 NA promoter-TSS (NM_001195681) promoter-TSS (NM_001195681) -247 NM_001195681 100502940 Mm.235705 NM_001195681 ENSMUSG00000079559 Colca2 Gm684 COLCA2 homolog protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-11 chr2 130489927 130490168 + 2.05605744720049 NA intron (NM_001355161, intron 1 of 21) intron (NM_001355161, intron 1 of 21) 39769 NM_001355161 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-8 chr16 55498171 55498429 + 2.05605744720049 NA Intergenic Intergenic 3569 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-46 chr5 122162973 122163181 + 2.05605744720049 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 4798 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-7 chr10 87971917 87972153 + 2.05605744720049 NA Intergenic Intergenic 5364 NR_000040 22172 Mm.391420 NR_000040 Tyms-ps - thymidylate synthase, pseudogene pseudo unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-12 chr13 67728300 67728580 + 2.05605744720049 NA promoter-TSS (NR_027969) promoter-TSS (NR_027969) 733 NM_145622 235907 Mm.440123 NM_145622 ENSMUSG00000071281 Zfp65 KRAB5|Zfp71-rs1|pz114 zinc finger protein 65 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-55 chr8 120287661 120287860 + 2.05605744720049 NA Intergenic Intergenic -59530 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-3 chr1 184714995 184715198 + 2.05605744720049 NA intron (NR_040627, intron 2 of 2) Lx7|LINE|L1 2599 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-14 chr4 152577735 152577948 + 2.05605744720049 NA Intergenic Intergenic 99699 NM_153424 260305 Mm.302496 NM_153424 ENSMUSG00000039577 Nphp4 4930564O18Rik|nmf192 nephronophthisis 4 (juvenile) homolog (human) protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-45 chr4 139976906 139977163 + 2.05605744720049 NA Intergenic Intergenic -9008 NM_173427 242721 Mm.60400 NM_173427 ENSMUSG00000078234 Klhdc7a B230308G19Rik kelch domain containing 7A protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-24 chr18 35861952 35862144 + 2.05605744720049 NA TTS (NM_133687) TTS (NM_133687) 7361 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-36 chr4 41048645 41048881 + 2.05605744720049 NA promoter-TSS (NM_007473) promoter-TSS (NM_007473) -627 NM_007473 11832 Mm.8728 NM_007473 ENSMUSG00000028427 Aqp7 AQP7L|AQPap aquaporin 7 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-9 chr17 5646677 5646884 + 2.05605744720049 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) -151877 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-6 chr10 69712504 69712696 + 2.05605744720049 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 178892 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-22 chr17 80652887 80653149 + 2.05605744720049 NA intron (NM_001360278, intron 6 of 33) intron (NM_001360278, intron 6 of 33) 75007 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-5 chr12 80240997 80241207 + 2.05605744720049 NA intron (NM_134156, intron 1 of 20) RSINE1|SINE|B4 19269 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-33 chr3 126044657 126044850 + 2.05605744720049 NA Intergenic Intergenic -106101 NR_149311 22239 Mm.306021 NM_011674 ENSMUSG00000032854 Ugt8a AI850488|AW455908|Cgt|Ugt8|mCerGT UDP galactosyltransferase 8A protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-58 chr9 47603989 47604268 + 2.05605744720049 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 73776 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-47 chr6 100801764 100802013 + 2.05605744720049 NA intron (NM_198612, intron 6 of 6) intron (NM_198612, intron 6 of 6) -31750 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-17 chr15 101163666 101163880 + 2.05605744720049 NA Intergenic Intergenic -10299 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ALK-4|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-30 chr3 60713225 60713426 + 2.05605744720049 NA Intergenic Intergenic 212146 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-27 chr2 167817549 167817747 + 2.05605744720049 NA Intergenic Intergenic -114679 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-9 chr11 85312625 85312821 + 2.05605744720049 NA intron (NM_016910, intron 1 of 5) intron (NM_016910, intron 1 of 5) 1469 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-11 chr12 73725729 73725928 + 2.05605744720049 NA intron (NM_008856, intron 10 of 13) intron (NM_008856, intron 10 of 13) 141032 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-13 chr4 80950828 80951063 + 2.05605744720049 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 40259 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-38 chr4 43548983 43549188 + 2.05605744720049 NA intron (NM_011602, intron 17 of 56) intron (NM_011602, intron 17 of 56) 13498 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-26 chr19 58107528 58107732 + 2.05605744720049 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 56463 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-16 chr15 85633321 85633512 + 2.05605744720049 NA Intergenic B1_Mm|SINE|Alu -51595 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-51 chr7 144928153 144928344 + 2.05605744720049 NA intron (NM_001357868, intron 4 of 4) intron (NM_001357868, intron 4 of 4) 11677 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-25 chr19 41480672 41480979 + 2.05605744720049 NA Intergenic URR1B|DNA|hAT-Charlie -44427 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-10 chr11 98204859 98205058 + 2.05605744720049 NA intron (NM_026952, intron 1 of 12) intron (NM_026952, intron 1 of 12) 1653 NM_001109626 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-8 chr11 44950941 44951148 + 2.05605744720049 NA intron (NM_001290709, intron 10 of 15) B1_Mur2|SINE|Alu 165884 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-20 chr16 31517842 31518089 + 2.05605744720049 NA Intergenic Intergenic -88189 NR_152205 100047123 Mm.466711 NR_152205 Gm15743 - predicted gene 15743 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-28 chr3 9768548 9768740 + 2.05605744720049 NA intron (NM_053182, intron 1 of 7) intron (NM_053182, intron 1 of 7) 65035 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-3 chr10 16951321 16951533 + 2.05605744720049 NA non-coding (NR_038020, exon 9 of 9) non-coding (NR_038020, exon 9 of 9) 144355 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-19 chr16 20676914 20677143 + 2.05605744720049 NA intron (NM_145941, intron 6 of 32) (TATATG)n|Simple_repeat|Simple_repeat 4301 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-54 chr8 57402057 57402271 + 2.05605744720049 NA Intergenic Intergenic -53759 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-16 chr6 119300503 119300715 + 2.05605744720049 NA intron (NM_001033382, intron 22 of 37) intron (NM_001033382, intron 22 of 37) 28595 NM_001172207 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-52 chr8 35942261 35942448 + 2.05605744720049 NA Intergenic Intergenic -59397 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-23 chr17 84046191 84046424 + 2.05605744720049 NA Intergenic Intergenic -32353 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-18 chr16 18113029 18113224 + 2.05605744720049 NA Intergenic Intergenic -14580 NM_022982 65079 Mm.40149 NM_022982 ENSMUSG00000043811 Rtn4r NOGOR|NgR|NgR1 reticulon 4 receptor protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-32 chr3 105221091 105221283 + 2.05605744720049 NA Intergenic Intergenic 154343 NM_029228 75269 Mm.307994 NM_029228 ENSMUSG00000051788 4930564D02Rik - RIKEN cDNA 4930564D02 gene protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-31 chr3 89795460 89795648 + 2.05605744720049 NA Intergenic PB1D10|SINE|Alu 21945 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-53 chr8 36893544 36893754 + 2.05605744720049 NA intron (NM_001194940, intron 2 of 17) intron (NM_001194940, intron 2 of 17) 58793 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-15 chr5 29388284 29388513 + 2.05605744720049 NA Intergenic Intergenic -10008 NM_020295 56873 Mm.41572 NM_020295 ENSMUSG00000010721 Lmbr1 1110048D14Rik|AU017641 limb region 1 protein-coding unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049-42 chr4 95848079 95848302 + 2.05605744720049 NA intron (NM_001113412, intron 13 of 15) intron (NM_001113412, intron 13 of 15) 118845 NR_045777 319247 Mm.473527 NM_175680 ENSMUSG00000044125 9530080O11Rik - RIKEN cDNA 9530080O11 gene ncRNA unique_peak2_0_8_-3.41166503893154_1.46409248197654_2.05605744720049-4 chr10 39646999 39647213 + 2.05605744720049 NA intron (NM_134000, intron 7 of 8) intron (NM_134000, intron 7 of 8) -33424 NR_152260 100504626 Mm.440236 NR_152259 Gm16364 Gm16365 predicted gene 16364 ncRNA unique_peak1_9_1_2.05675192254492_2.02837596127246_2.05605744720049 chr1 70144091 70144336 + 2.05605744720049 NA intron (NM_025728, intron 2 of 7) intron (NM_025728, intron 2 of 7) 192598 NM_025728 66722 Mm.440554 NM_025728 ENSMUSG00000053153 Spag16 4921511D23Rik|4930524F24Rik|4930585K05Rik|AV261009|Pf20|Wdr29 sperm associated antigen 16 protein-coding common_peak2_71_94_-0.685199339231487_6.2272559387152_2.0551173424187 chr6 91192031 91192967 + 2.0551173424187 NA Intergenic Intergenic -20265 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_114_59_0.64856462536837_6.2311729082927_2.05511734241869 chr6 47877317 47878655 + 2.05511734241869 NA intron (NM_146175, intron 1 of 7) CpG 431 NM_146175 101095 Mm.440186 NM_146175 ENSMUSG00000025821 Zfp282 AI449432|C81429|E430019K09Rik|HUB1 zinc finger protein 282 protein-coding common_peak1_292_180_0.395357087634164_7.69752443090029_2.05424909928833 chr12 112720518 112723832 + 2.05424909928833 NA promoter-TSS (NM_001024602) promoter-TSS (NM_001024602) 1 NM_001024602 217882 Mm.23689 NM_001024602 ENSMUSG00000072825 Cep170b AI466840|AW555464|Kiaa0284|mKIAA0284 centrosomal protein 170B protein-coding common_peak1_81_104_-0.643285950065684_6.39260254263328_2.05330344517492 chr4 139580186 139581173 + 2.05330344517492 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 5959 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_159_89_0.536678907922267_6.76019255029081_2.05288958315677 chr14 34085674 34087942 + 2.05288958315677 NA intron (NM_013473, intron 1 of 11) intron (NM_013473, intron 1 of 11) 829 NM_013473 11752 Mm.3267 NM_013473 ENSMUSG00000021950 Anxa8 AI466995|Anx8 annexin A8 protein-coding common_peak1_160_89_0.545604275467465_6.76465523406341_2.05288958315677 chr19 5456173 5458063 + 2.05288958315677 NA exon (NM_001243307, exon 2 of 2) exon (NM_001243307, exon 2 of 2) 445 NM_198616 240514 Mm.329657 NM_198616 ENSMUSG00000095098 Ccdc85b AI842788|BB115872 coiled-coil domain containing 85B protein-coding common_peak2_26_45_-1.04396012558361_5.00158189326521_2.05089002217436 chr7 110933698 110934403 + 2.05089002217436 NA intron (NM_194464, intron 2 of 20) intron (NM_194464, intron 2 of 20) 12137 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding common_peak1_54_22_0.975270345293926_5.01119712870398_2.05089002217436 chr1 182503979 182504449 + 2.05089002217436 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 13396 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_54_22_0.975270345293926_5.01119712870398_2.05089002217436-3 chr2 163658093 163658790 + 2.05089002217436 NA promoter-TSS (NM_001164055) promoter-TSS (NM_001164055) -17 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_26_45_-1.04396012558361_5.00158189326521_2.05089002217436 chr11 70646273 70646933 + 2.05089002217436 NA promoter-TSS (NM_027445) promoter-TSS (NM_027445) 436 NM_024211 67863 Mm.296082 NM_024211 ENSMUSG00000014606 Slc25a11 2310022P18Rik|2oxoc solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 protein-coding unique_peak1_54_22_0.975270345293926_5.01119712870398_2.05089002217436 chr6 99447289 99448205 + 2.05089002217436 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -12402 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_54_22_0.975270345293926_5.01119712870398_2.05089002217436-4 chr2 167774188 167774758 + 2.05089002217436 NA Intergenic Intergenic 83296 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_54_22_0.975270345293926_5.01119712870398_2.05089002217436-2 chr11 75495558 75496189 + 2.05089002217436 NA intron (NM_138659, intron 20 of 41) intron (NM_138659, intron 20 of 41) 9096 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding unique_peak2_26_45_-1.04396012558361_5.00158189326521_2.05089002217436 chr11 76159953 76160592 + 2.05089002217436 NA intron (NM_026664, intron 4 of 21) intron (NM_026664, intron 4 of 21) 19358 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak2_26_45_-1.04396012558361_5.00158189326521_2.05089002217436-2 chrX 134601321 134601921 + 2.05089002217436 NA promoter-TSS (NM_013463) promoter-TSS (NM_013463) 442 NM_001313717 56258 Mm.315909 NM_019868 ENSMUSG00000045427 Hnrnph2 DXHXS1271E|Ftp-3|Ftp3|H'|HNRNP|Hnrph2 heterogeneous nuclear ribonucleoprotein H2 protein-coding common_peak2_54_22_0.975270345293926_5.01119712870398_2.05089002217436 chr7 80827819 80828109 + 2.05089002217436 NA Intergenic Intergenic -24633 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_292_304_-0.357462457732879_8.07393420358381_2.05055953824721 chr17 5840583 5843279 + 2.05055953824721 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 551 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak1_167_94_0.528569128541944_6.83414017260192_2.04932757775777 chr15 82353643 82354714 + 2.04932757775777 NA exon (NM_025987, exon 1 of 3) exon (NM_025987, exon 1 of 3) 113 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding unique_peak2_32_52_-0.96085447016544_5.24749321948048_2.04885494247583 chr2 130667434 130668311 + 2.04885494247583 NA promoter-TSS (NM_025922) promoter-TSS (NM_025922) 31 NM_025922 16434 Mm.21399 NM_025922 ENSMUSG00000074797 Itpa 2010016I08Rik|AU020102|ITPase|Itp|NTPase inosine triphosphatase (nucleoside triphosphate pyrophosphatase) protein-coding common_peak2_54_76_-0.767954239343962_5.88280942102292_2.04502579594583 chr12 79599019 79599871 + 2.04502579594583 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 302094 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_62_85_-0.732894456455264_6.05981752647447_2.04420425592612 chr2 129207201 129208007 + 2.04420425592612 NA intron (NM_001355252, intron 1 of 5) intron (NM_001355252, intron 1 of 5) 508 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_103_52_0.683507760745425_6.06967433493591_2.04420425592611 chr3 121725575 121726417 + 2.04420425592611 NA intron (NM_010171, intron 2 of 5) intron (NM_010171, intron 2 of 5) 2459 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_140_76_0.580655385261364_6.55711423332558_2.04247067717388 chr8 117284273 117285114 + 2.04247067717388 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 27674 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-69 chr8 84211306 84211509 + 2.04196296489515 NA 3' UTR (NM_172503, exon 14 of 14) 3' UTR (NM_172503, exon 14 of 14) -2500 NR_037294 100526528 NR_037294 ENSMUSG00000105458 Mir3074-2 mir-3074-2|mmu-mir-3074-2 microRNA 3074-2 ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515 chr10 71363802 71364065 + 2.04196296489515 NA intron (NM_027184, intron 2 of 5) PB1|SINE|Alu 16170 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-27 chr15 86199899 86200187 + 2.04196296489515 NA Intergenic Intergenic -13902 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-3 chr11 32946557 32946815 + 2.04196296489515 NA Intergenic Intergenic -122092 NM_027050 69351 Mm.65488 NM_027050 ENSMUSG00000020270 Smim23 1700008A04Rik small integral membrane protein 23 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-30 chr17 6997678 6997876 + 2.04196296489515 NA intron (NM_026611, intron 8 of 8).2 intron (NM_026611, intron 8 of 8).2 18917 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-48 chr3 137298211 137298561 + 2.04196296489515 NA Intergenic Intergenic -42692 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-76 chrX 8223355 8223688 + 2.04196296489515 NA Intergenic Intergenic -16996 NM_145908 53627 Mm.443425 NM_016913 ENSMUSG00000031169 Porcn 2410004O13Rik|AW045557|DXHXS7465e|Mg61|Mporc|Ppn|mMg61|porc porcupine O-acyltransferase protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-7 chr16 23109567 23109773 + 2.04196296489515 NA TTS (NR_030705) TTS (NR_030705) 717 NR_030705 100216532 NR_030705 ENSMUSG00000088524 Snord2 - small nucleolar RNA, C/D box 2 snoRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515 chr1 118438130 118438342 + 2.04196296489515 NA intron (NM_001359330, intron 2 of 39) intron (NM_001359330, intron 2 of 39) 21029 NR_027901 68204 Mm.443536 NR_027901 ENSMUSG00000107722 2900060B14Rik - RIKEN cDNA 2900060B14 gene ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-9 chr10 127501307 127501536 + 2.04196296489515 NA promoter-TSS (NM_177707) promoter-TSS (NM_177707) -265 NM_001359751 237611 Mm.32087 NM_177707 ENSMUSG00000040287 Stac3 9830125E18 SH3 and cysteine rich domain 3 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-26 chr8 103220545 103220778 + 2.04196296489515 NA Intergenic B1_Mus1|SINE|Alu 126873 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515 chr15 62118796 62119061 + 2.04196296489515 NA intron (NR_132746, intron 2 of 6) ID_B1|SINE|B4 79671 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-2 chr16 33892919 33893145 + 2.04196296489515 NA intron (NM_001145884, intron 5 of 14) PB1D7|SINE|Alu 63367 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-55 chr5 103517429 103517675 + 2.04196296489515 NA exon (NM_011204, exon 9 of 48) exon (NM_011204, exon 9 of 48) 92360 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-35 chr18 56362261 56362521 + 2.04196296489515 NA Intergenic Intergenic -37949 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-13 chr11 88593121 88593332 + 2.04196296489515 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -26025 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-17 chr6 127325516 127325763 + 2.04196296489515 NA Intergenic Intergenic -17672 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-6 chr10 80624504 80624722 + 2.04196296489515 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 1833 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-38 chr19 28793683 28793926 + 2.04196296489515 NA Intergenic Intergenic -41362 NM_009199 20510 Mm.246670 NM_009199 ENSMUSG00000024935 Slc1a1 D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-59 chr7 66372577 66372775 + 2.04196296489515 NA intron (NM_146191, intron 2 of 33) B1F|SINE|Alu 9048 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-18 chr6 146185915 146186138 + 2.04196296489515 NA intron (NM_019923, intron 48 of 56) intron (NM_019923, intron 48 of 56) 251904 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-34 chr9 106822684 106822886 + 2.04196296489515 NA intron (NM_001015507, intron 1 of 22) intron (NM_001015507, intron 1 of 22) 809 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Dcaf1 AI447437|B930007L02Rik|Vprbp|mKIAA0800 DDB1 and CUL4 associated factor 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-45 chr2 152604678 152604933 + 2.04196296489515 NA intron (NM_001037247, intron 1 of 1) intron (NM_001037247, intron 1 of 1) 478 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-39 chr19 42263326 42263551 + 2.04196296489515 NA exon (NM_001141983, exon 4 of 7) exon (NM_001141983, exon 4 of 7) 7699 NM_027694 71146 Mm.329851 NM_027694 ENSMUSG00000042532 Golga7b 4933417O08Rik|AI839934 golgi autoantigen, golgin subfamily a, 7B protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-2 chr1 149846409 149846625 + 2.04196296489515 NA intron (NM_008869, intron 15 of 17) intron (NM_008869, intron 15 of 17) 75922 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-40 chr2 4481092 4481448 + 2.04196296489515 NA intron (NM_001177843, intron 3 of 23) intron (NM_001177843, intron 3 of 23) -78484 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-31 chr17 26533058 26533338 + 2.04196296489515 NA Intergenic Intergenic -24726 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-11 chr2 6162626 6162916 + 2.04196296489515 NA Intergenic Intergenic 29888 NR_033471 100038358 Mm.353975 NR_033470 ENSMUSG00000102887 Gm10857 AU015850 predicted gene 10857 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-73 chr9 50756197 50756396 + 2.04196296489515 NA exon (NM_001289784, exon 4 of 4) exon (NM_001289784, exon 4 of 4) 3325 NM_009964 12955 Mm.178 NM_009964 ENSMUSG00000032060 Cryab Crya-2|Crya2|HspB5|P23 crystallin, alpha B protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-16 chr12 8343172 8343376 + 2.04196296489515 NA 3' UTR (NM_021429, exon 7 of 7) 3' UTR (NM_021429, exon 7 of 7) 29841 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-20 chr7 101854247 101854549 + 2.04196296489515 NA intron (NM_001303239, intron 2 of 5) intron (NM_001303239, intron 2 of 5) 2792 NM_001303239 14276 Mm.439666 NM_008035 ENSMUSG00000032725 Folr2 FBP2|FR-P3|FR-beta|Folbp-2|Folbp2 folate receptor 2 (fetal) protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-17 chr12 15764723 15765092 + 2.04196296489515 NA Intergenic B1_Mus1|SINE|Alu 36194 NR_105809 102465204 NR_105809 ENSMUSG00000098480 Mir6387 Gm27281|mmu-mir-6387 microRNA 6387 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-46 chr3 14916865 14917197 + 2.04196296489515 NA Intergenic Intergenic 30743 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-60 chr7 101474063 101474267 + 2.04196296489515 NA intron (NR_152192, intron 3 of 31) intron (NR_152192, intron 3 of 31) -1211 NR_029791 387157 NR_029791 ENSMUSG00000065446 Mir139 Mirn139|mir-139|mmu-mir-139 microRNA 139 ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-25 chr8 61288153 61288374 + 2.04196296489515 NA intron (NR_045475, intron 1 of 4) intron (NR_045475, intron 1 of 4) 609 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-9 chr17 78366763 78367062 + 2.04196296489515 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 51240 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-13 chr3 137216921 137217152 + 2.04196296489515 NA Intergenic Intergenic -124042 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-50 chr4 141641759 141642065 + 2.04196296489515 NA intron (NM_001347237, intron 4 of 18) intron (NM_001347237, intron 4 of 18) -18078 NM_001013780 384071 Mm.295682 NM_001013780 ENSMUSG00000040740 Slc25a34 Gm1369 solute carrier family 25, member 34 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-24 chr14 69442575 69442789 + 2.04196296489515 NA Intergenic Intergenic 69867 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-11 chr11 59325677 59325917 + 2.04196296489515 NA intron (NM_139298, intron 1 of 3) intron (NM_139298, intron 1 of 3) 18867 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-65 chr7 144340887 144341111 + 2.04196296489515 NA intron (NM_001081370, intron 2 of 10) intron (NM_001081370, intron 2 of 10) 56614 NM_001081370 210274 Mm.483624 NM_001081370 ENSMUSG00000037541 Shank2 ProSAP1|mKIAA1022 SH3 and multiple ankyrin repeat domains 2 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-4 chr13 108776352 108776714 + 2.04196296489515 NA intron (NM_011056, intron 1 of 16) intron (NM_011056, intron 1 of 16) 122356 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-67 chr8 26982133 26982326 + 2.04196296489515 NA TTS (NM_001101502) TTS (NM_001101502) 4893 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-7 chr10 96756382 96756680 + 2.04196296489515 NA Intergenic Intergenic 139530 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-28 chr8 121192414 121192702 + 2.04196296489515 NA Intergenic Intergenic 64873 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-2 chr10 86167893 86168112 + 2.04196296489515 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 72148 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-30 chr9 55114981 55115304 + 2.04196296489515 NA Intergenic Intergenic -34227 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-28 chr15 93266708 93266967 + 2.04196296489515 NA intron (NM_001346785, intron 1 of 7) intron (NM_001346785, intron 1 of 7) 8342 NM_001357006 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-68 chr8 45650905 45651216 + 2.04196296489515 NA intron (NM_001310707, intron 1 of 23) intron (NM_001310707, intron 1 of 23) -10933 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-27 chr8 113896073 113896385 + 2.04196296489515 NA Intergenic Intergenic -47390 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-8 chr10 99249448 99249705 + 2.04196296489515 NA Intergenic Intergenic -13655 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-36 chr18 68084172 68084454 + 2.04196296489515 NA intron (NM_172631, intron 2 of 5) intron (NM_172631, intron 2 of 5) -143633 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-43 chr2 132212874 132213066 + 2.04196296489515 NA Intergenic Intergenic 34818 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-5 chr10 68179889 68180138 + 2.04196296489515 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 98713 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-19 chr13 41368236 41368471 + 2.04196296489515 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -9352 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-15 chr4 20042173 20042380 + 2.04196296489515 NA exon (NM_010281, exon 1 of 9) exon (NM_010281, exon 1 of 9) 224 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding common_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515 chr9 110879602 110879834 + 2.04196296489515 NA promoter-TSS (NM_146228) promoter-TSS (NM_146228) 365 NM_146260 20776 Mm.390229 NM_146260 ENSMUSG00000049555 Tmie 5131400L21Rik|Mm.87012|sr transmembrane inner ear protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-22 chr8 9135266 9135510 + 2.04196296489515 NA Intergenic Intergenic -3100 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-49 chr4 114603316 114603640 + 2.04196296489515 NA intron (NM_001085549, intron 6 of 6) intron (NM_001085549, intron 6 of 6) 196754 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-14 chr3 144579556 144579786 + 2.04196296489515 NA intron (NM_053102, intron 2 of 4) intron (NM_053102, intron 2 of 4) 9244 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-63 chr7 130642342 130642607 + 2.04196296489515 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -50082 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-72 chr8 128453521 128453714 + 2.04196296489515 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 94376 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-44 chr2 145757455 145757664 + 2.04196296489515 NA Intergenic Intergenic -28557 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-22 chr13 112810908 112811171 + 2.04196296489515 NA intron (NM_008903, intron 1 of 5) intron (NM_008903, intron 1 of 5) 10262 NM_008247 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-70 chr8 120910221 120910473 + 2.04196296489515 NA Intergenic Intergenic 171708 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-10 chr18 64478572 64478828 + 2.04196296489515 NA exon (NM_001348055, exon 2 of 10) exon (NM_001348055, exon 2 of 10) 10398 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-58 chr6 147115773 147115991 + 2.04196296489515 NA Intergenic Intergenic 24807 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-21 chr7 144030546 144030799 + 2.04196296489515 NA Intergenic Intergenic 21418 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-66 chr8 12791654 12791901 + 2.04196296489515 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 34761 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-64 chr7 134227069 134227297 + 2.04196296489515 NA Intergenic Intergenic -2086 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-32 chr9 59724843 59725068 + 2.04196296489515 NA Intergenic Intergenic 17191 NM_001033498 546134 Mm.297580 NM_001033498 ENSMUSG00000074259 Gramd2 BC064463|Gramd2a GRAM domain containing 2 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-8 chr16 55520833 55521035 + 2.04196296489515 NA Intergenic Intergenic 26203 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-16 chr4 133607987 133608342 + 2.04196296489515 NA 3' UTR (NM_001017968, exon 8 of 8) 3' UTR (NM_001017968, exon 8 of 8) -5996 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-52 chr5 66547517 66547704 + 2.04196296489515 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 71207 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-77 chrX 37127463 37127665 + 2.04196296489515 NA intron (NM_025937, intron 1 of 8) intron (NM_025937, intron 1 of 8) 801 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-26 chr15 79370641 79370832 + 2.04196296489515 NA intron (NM_001253820, intron 1 of 6) intron (NM_001253820, intron 1 of 6) 4564 NR_035464 100316695 NR_035464 ENSMUSG00000088901 Mir1943 mir-1943|mmu-mir-1943 microRNA 1943 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-71 chr8 126556599 126556795 + 2.04196296489515 NA Intergenic Intergenic 36739 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-10 chr11 4190069 4190269 + 2.04196296489515 NA intron (NM_134023, intron 1 of 8) intron (NM_134023, intron 1 of 8) 3336 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-41 chr2 113379689 113379881 + 2.04196296489515 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 52049 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-24 chr8 34275483 34275765 + 2.04196296489515 NA Intergenic Intergenic -108912 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-25 chr14 120841638 120841898 + 2.04196296489515 NA Intergenic Intergenic -69426 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-29 chr8 121315781 121316045 + 2.04196296489515 NA Intergenic Intergenic 188228 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-29 chr16 85808071 85808318 + 2.04196296489515 NA Intergenic Intergenic -5081 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-14 chr11 96790782 96790977 + 2.04196296489515 NA intron (NM_007622, intron 1 of 5) PB1D11|SINE|Alu 1743 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-15 chr11 100713476 100713823 + 2.04196296489515 NA promoter-TSS (NM_029307) promoter-TSS (NM_029307) -201 NM_029307 75482 Mm.46175 NM_029307 ENSMUSG00000017832 Hspb9 1700007H20Rik heat shock protein, alpha-crystallin-related, B9 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-33 chr9 92315362 92315596 + 2.04196296489515 NA intron (NM_001033184, intron 1 of 6) intron (NM_001033184, intron 1 of 6) 6102 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-37 chr19 16283766 16283976 + 2.04196296489515 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 31133 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-31 chr9 58452409 58452628 + 2.04196296489515 NA Intergenic Intergenic -2655 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-57 chr6 31319399 31319704 + 2.04196296489515 NA intron (NR_040261, intron 3 of 4) intron (NR_040261, intron 3 of 4) 79222 NR_040300 100503869 Mm.370532 NR_040300 ENSMUSG00000086212 Mkln1os Gm13845 muskelin 1, intracellular mediator containing kelch motifs, opposite strand ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-21 chr13 85429920 85430115 + 2.04196296489515 NA Intergenic Intergenic -140531 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-3 chr1 153308242 153308568 + 2.04196296489515 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 24381 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-51 chr5 32922457 32922695 + 2.04196296489515 NA intron (NM_001025426, intron 22 of 42) L1MD2|LINE|L1 58855 NM_001170567 277854 Mm.101524 NM_177786 ENSMUSG00000037426 Depdc5 AV016528 DEP domain containing 5 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-74 chr9 65569267 65569541 + 2.04196296489515 NA intron (NM_153119, intron 2 of 5) intron (NM_153119, intron 2 of 5) 10683 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-34 chr18 43433136 43433391 + 2.04196296489515 NA intron (NM_001291455, intron 1 of 13) intron (NM_001291455, intron 1 of 13) 5023 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-42 chr2 125248607 125248889 + 2.04196296489515 NA intron (NM_023595, intron 1 of 5) intron (NM_023595, intron 1 of 5) 1233 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-12 chr2 157069926 157070129 + 2.04196296489515 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 9238 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-19 chr7 100915148 100915355 + 2.04196296489515 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 16910 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-54 chr5 100663068 100663281 + 2.04196296489515 NA intron (NM_027978, intron 3 of 6) intron (NM_027978, intron 3 of 6) 11082 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-75 chr9 69435131 69435451 + 2.04196296489515 NA Intergenic Intergenic -18392 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-20 chr13 70601725 70602064 + 2.04196296489515 NA intron (NM_144837, intron 13 of 18) intron (NM_144837, intron 13 of 18) 28653 NR_045934 73584 Mm.442491 NR_045934 ENSMUSG00000101051 1700100L14Rik - RIKEN cDNA 1700100L14 gene ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-4 chr10 25449716 25450098 + 2.04196296489515 NA intron (NM_001358754, intron 3 of 16) intron (NM_001358754, intron 3 of 16) 41539 NM_013511 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-18 chr12 69448653 69448913 + 2.04196296489515 NA Intergenic Intergenic 26767 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-23 chr8 11453899 11454104 + 2.04196296489515 NA TTS (NM_011227) TTS (NM_011227) -23928 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-61 chr7 109573623 109573936 + 2.04196296489515 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 42789 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-32 chr17 78507075 78507289 + 2.04196296489515 NA promoter-TSS (NM_028813) promoter-TSS (NM_028813) -881 NM_001197028 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-47 chr3 79883910 79884174 + 2.04196296489515 NA Intergenic Intergenic -1888 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-53 chr5 72863005 72863240 + 2.04196296489515 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 5326 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-12 chr11 85792675 85792891 + 2.04196296489515 NA non-coding (NR_077059, exon 5 of 5) non-coding (NR_077059, exon 5 of 5) -17103 NR_046194 78420 Mm.488197 NR_046194 ENSMUSG00000085514 Bcas3os2 9530048J24Rik breast carcinoma amplified sequence 3 opposite strand 2 ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-6 chr15 51853942 51854171 + 2.04196296489515 NA intron (NM_080635, intron 1 of 7) B3A|SINE|B2 11405 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-33 chr17 87458357 87458545 + 2.04196296489515 NA Intergenic Intergenic -11516 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-56 chr6 17407917 17408132 + 2.04196296489515 NA Intergenic Intergenic -55933 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-62 chr7 122955296 122955495 + 2.04196296489515 NA Intergenic Intergenic 15064 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA unique_peak2_4_13_-1.74354801993944_2.93558091208788_2.04196296489515-5 chr13 119619491 119619727 + 2.04196296489515 NA Intergenic Intergenic -4210 NM_020279 56838 Mm.143745 NM_020279 ENSMUSG00000074715 Ccl28 CCK1|MEC|Scya28 chemokine (C-C motif) ligand 28 protein-coding unique_peak1_15_4_1.40811194933043_3.02598406955258_2.04196296489515-23 chr14 65343489 65343683 + 2.04196296489515 NA Intergenic CpG -15090 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak1_67_90_-0.705018762435489_6.15528525898095_2.03624777996388 chr7 145109188 145110370 + 2.03624777996388 NA Intergenic Intergenic 98340 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_67_90_-0.705018762435489_6.15528525898095_2.03624777996388 chr15 58140964 58141874 + 2.03624777996388 NA promoter-TSS (NM_001326599) promoter-TSS (NM_001326599) 53 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak2_50_72_-0.799158099316111_5.79024550922196_2.03570638876314 chr9 21090928 21091970 + 2.03570638876314 NA intron (NR_038081, intron 1 of 16) intron (NR_038081, intron 1 of 16) 539 NM_027911 71766 Mm.196137 NM_027911 ENSMUSG00000010205 Raver1 1300006N24Rik|AA050359|mKIAA1978 ribonucleoprotein, PTB-binding 1 protein-coding common_peak1_87_42_0.745855668321718_5.79919258886296_2.03570638876314 chr3 41285215 41285699 + 2.03570638876314 NA Intergenic Intergenic -202411 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_50_72_-0.799158099316111_5.79024550922196_2.03570638876314 chr8 44995761 44996419 + 2.03570638876314 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 45882 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_35_56_-0.941178765492037_5.36230063141872_2.03490996975666 chr2 140100115 140100687 + 2.03490996975666 NA Intergenic Intergenic -33596 NR_110351 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak1_67_30_0.848579567376333_5.37848609407504_2.03490996975666 chr15 85666558 85666998 + 2.03490996975666 NA Intergenic Intergenic -36995 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_206_121_0.466732189115032_7.1641034321204_2.03419223552263 chr3 157533816 157534999 + 2.03419223552263 NA promoter-TSS (NR_152231) promoter-TSS (NR_152231) 242 NM_001355386 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding common_peak2_115_138_-0.551083030919486_6.84339955726376_2.03414581212041 chr6 30047612 30048716 + 2.03414581212041 NA intron (NM_001164226, intron 1 of 11) CpG 176 NM_001164227 18181 Mm.259258 NM_010938 ENSMUSG00000058440 Nrf1 C87038|D6Ertd415e nuclear respiratory factor 1 protein-coding common_peak1_23_42_-1.11538910825685_4.86857020057367_2.03367508793052 chr2 148184381 148184725 + 2.03367508793052 NA Intergenic Intergenic -137584 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak2_23_42_-1.11538910825685_4.86857020057367_2.03367508793052 chr11 88557118 88557862 + 2.03367508793052 NA intron (NM_054043, intron 6 of 13) RSINE1|SINE|B4 -61761 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_23_42_-1.11538910825685_4.86857020057367_2.03367508793052 chr4 65605087 65605593 + 2.03367508793052 NA intron (NM_001161782, intron 1 of 1) intron (NM_001161782, intron 1 of 1) 354 NM_001161782 69807 Mm.22786 NM_053084 ENSMUSG00000051675 Trim32 1810045E12Rik|3f3|BBS11|Zfp117 tripartite motif-containing 32 protein-coding unique_peak1_50_20_0.998349036785146_4.89149194117133_2.03367508793052 chr10 80854577 80855203 + 2.03367508793052 NA promoter-TSS (NM_001358803) promoter-TSS (NM_001358803) 266 NM_001359150 66094 Mm.379101 NM_025349 ENSMUSG00000035215 Lsm7 0910001B06Rik|1110033F18Rik LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_50_20_0.998349036785146_4.89149194117133_2.03367508793052-2 chr12 102288709 102289413 + 2.03367508793052 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 5420 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_72_95_-0.680547065155229_6.24468896814354_2.032083632645 chr7 64063876 64064874 + 2.032083632645 NA Intergenic Intergenic -89460 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_14_30_-1.3166087856145_4.29589191757962_2.03163221100073 chr17 26637743 26638312 + 2.03163221100073 NA intron (NM_026170, intron 7 of 9) intron (NM_026170, intron 7 of 9) -38369 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073 chr11 53773213 53773709 + 2.03163221100073 NA intron (NM_001159393, intron 3 of 9) intron (NM_001159393, intron 3 of 9) 2988 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-6 chr8 122989545 122989885 + 2.03163221100073 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 52569 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_14_30_-1.3166087856145_4.29589191757962_2.03163221100073 chr11 16851994 16852447 + 2.03163221100073 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 99062 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA common_peak2_13_30_-1.41544223702171_4.24647519187602_2.03163221100073 chr6 37617558 37617805 + 2.03163221100073 NA Intergenic Intergenic 87508 NM_145364 208665 Mm.262635 NM_145364 ENSMUSG00000038641 Akr1d1 - aldo-keto reductase family 1, member D1 protein-coding unique_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073 chr10 69537918 69538178 + 2.03163221100073 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 4340 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding common_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-5 chr5 101216990 101217437 + 2.03163221100073 NA Intergenic Intergenic 370984 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding common_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-3 chr18 12610501 12611093 + 2.03163221100073 NA Intergenic Intergenic -32736 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding unique_peak2_14_30_-1.3166087856145_4.29589191757962_2.03163221100073-5 chr7 116441770 116442406 + 2.03163221100073 NA intron (NM_011083, intron 1 of 32) intron (NM_011083, intron 1 of 32) 1370 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding unique_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-3 chrX 95948521 95949104 + 2.03163221100073 NA intron (NM_152822, intron 7 of 12) intron (NM_152822, intron 7 of 12) 8162 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak2_14_30_-1.3166087856145_4.29589191757962_2.03163221100073-4 chr15 11538591 11538958 + 2.03163221100073 NA Intergenic Intergenic -139116 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-2 chr19 10139638 10140237 + 2.03163221100073 NA Intergenic Intergenic -38434 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak2_14_30_-1.3166087856145_4.29589191757962_2.03163221100073-3 chr14 6756548 6756890 + 2.03163221100073 NA intron (NM_001309401, intron 1 of 4) intron (NM_001309401, intron 1 of 4) 338 NM_001309401 100041151 Mm.396155 NM_001309401 ENSMUSG00000091754 Gm3636 100042043 predicted gene 3636 protein-coding common_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-4 chr2 25181234 25181748 + 2.03163221100073 NA 3' UTR (NM_025980, exon 1 of 1) 3' UTR (NM_025980, exon 1 of 1) 733 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_35_12_1.19127153053161_4.2960754834069_2.03163221100073 chr3 19430074 19430317 + 2.03163221100073 NA Intergenic Intergenic -78400 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak2_13_30_-1.41544223702171_4.24647519187602_2.03163221100073-2 chr8 78717209 78717619 + 2.03163221100073 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 103738 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_13_30_-1.41544223702171_4.24647519187602_2.03163221100073-3 chr8 124721571 124721926 + 2.03163221100073 NA promoter-TSS (NM_026855) promoter-TSS (NM_026855) 246 NM_001357357 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak1_35_12_1.19127153053161_4.2960754834069_2.03163221100073-2 chr11 116827467 116827804 + 2.03163221100073 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 411 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding unique_peak2_14_30_-1.3166087856145_4.29589191757962_2.03163221100073-2 chr13 45883611 45884141 + 2.03163221100073 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 81115 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_77_100_-0.658892685642471_6.32876513993056_2.03107653970316 chr2 152736450 152737342 + 2.03107653970316 NA intron (NM_001355113, intron 1 of 1) CpG 645 NM_001355113 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak1_46_68_-0.834863153476115_5.69109288004011_2.02930105745011 chr12 108836100 108836775 + 2.02930105745011 NA promoter-TSS (NM_181328) promoter-TSS (NM_181328) -536 NR_029773 723946 NR_029773 ENSMUSG00000065429 Mir345 Mirn345|mir-345|mmu-mir-345 microRNA 345 ncRNA common_peak1_82_39_0.766395526003556_5.70512585788914_2.02930105745011 chr15 81272330 81273080 + 2.02930105745011 NA Intergenic Intergenic -20843 NR_077230 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak1_82_39_0.766395526003556_5.70512585788914_2.02930105745011-2 chr19 21652416 21653022 + 2.02930105745011 NA promoter-TSS (NM_025423) promoter-TSS (NM_025423) 72 NM_025423 66206 Mm.272430 NM_025423 ENSMUSG00000035171 1110059E24Rik - RIKEN cDNA 1110059E24 gene protein-coding common_peak2_46_68_-0.834863153476115_5.69109288004011_2.02930105745011 chr18 68058820 68059610 + 2.02930105745011 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 126042 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_82_39_0.766395526003556_5.70512585788914_2.02930105745011-3 chr7 16842710 16843895 + 2.02930105745011 NA 5' UTR (NM_178900, exon 1 of 18) 5' UTR (NM_178900, exon 1 of 18) 237 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding common_peak2_59_81_-0.734074438992199_5.99051478512198_2.02918808266059 chr17 70748148 70748969 + 2.02918808266059 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 98219 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_98_49_0.696990417277244_5.99235139841335_2.02918808266058 chr19 10041702 10042194 + 2.02918808266058 NA exon (NM_021890, exon 1 of 12) exon (NM_021890, exon 1 of 12) 400 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-8 chr11 29626895 29627276 + 2.02801025126771 NA Intergenic Intergenic -65813 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-19 chr5 113226194 113226567 + 2.02801025126771 NA promoter-TSS (NM_001033428) promoter-TSS (NM_001033428) -529 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-4 chr10 17550930 17551309 + 2.02801025126771 NA Intergenic Intergenic -172109 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-6 chr10 80933746 80934110 + 2.02801025126771 NA Intergenic Intergenic 3837 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-12 chr13 70835493 70835734 + 2.02801025126771 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 6198 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-23 chr7 63924821 63925049 + 2.02801025126771 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 8078 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-2 chr1 91412871 91413198 + 2.02801025126771 NA intron (NM_001360900, intron 1 of 3) CpG-403 188 NM_019479 55927 Mm.280029 NM_019479 ENSMUSG00000067071 Hes6 AI326893|bHLHb41 hairy and enhancer of split 6 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-15 chr17 87220161 87220576 + 2.02801025126771 NA Intergenic Intergenic -25426 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771 chr1 182460816 182461221 + 2.02801025126771 NA intron (NM_173378, intron 17 of 17) intron (NM_173378, intron 17 of 17) 51851 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-22 chr6 145767853 145768144 + 2.02801025126771 NA Intergenic Intergenic -40385 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-24 chr8 94785631 94785920 + 2.02801025126771 NA Intergenic Intergenic 13595 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-11 chr12 111437532 111437985 + 2.02801025126771 NA Intergenic Intergenic -4903 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-14 chr15 53109653 53110006 + 2.02801025126771 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 236354 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-7 chr10 88503063 88503289 + 2.02801025126771 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 794 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-17 chr2 35262709 35263152 + 2.02801025126771 NA intron (NM_001206368, intron 1 of 16) intron (NM_001206368, intron 1 of 16) -3814 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-3 chr1 105865584 105865848 + 2.02801025126771 NA Intergenic Intergenic 84993 NM_009399 21934 Mm.6251 NM_009399 ENSMUSG00000026321 Tnfrsf11a Ly109|ODFR|OFE|Rank|TRANCE-R|mRANK tumor necrosis factor receptor superfamily, member 11a, NFKB activator protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-20 chr5 124552961 124553368 + 2.02801025126771 NA intron (NM_001190795, intron 1 of 13) CpG 300 NM_026409 67848 Mm.281601 NM_026409 ENSMUSG00000029389 Ddx55 2810021H22Rik|mKIAA1595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-5 chr10 75930666 75931068 + 2.02801025126771 NA intron (NM_008606, intron 1 of 7) intron (NM_008606, intron 1 of 7) 1635 NM_001306184 17385 Mm.4561 NM_008606 ENSMUSG00000000901 Mmp11 MMP-11|SL-3|ST3|Stmy3 matrix metallopeptidase 11 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-13 chr14 105897503 105897915 + 2.02801025126771 NA promoter-TSS (NM_011897) promoter-TSS (NM_011897) -890 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding common_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-2 chr15 37617805 37618098 + 2.02801025126771 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 62623 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-16 chr19 57013637 57013850 + 2.02801025126771 NA Intergenic Intergenic -5168 NM_001177797 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-25 chr8 125619894 125620180 + 2.02801025126771 NA Intergenic Intergenic 35399 NR_015535 75930 Mm.195663 NR_015535 ENSMUSG00000110629 4930567H12Rik 4930579P07Rik RIKEN cDNA 4930567H12 gene ncRNA unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-9 chr11 83868150 83868556 + 2.02801025126771 NA intron (NM_009330, intron 4 of 8) intron (NM_009330, intron 4 of 8) 15393 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771 chr1 12621680 12622110 + 2.02801025126771 NA Intergenic Intergenic -45668 NR_045297 329096 Mm.417782 NR_045297 ENSMUSG00000097171 Gm17644 4932411L15 predicted gene, 17644 ncRNA common_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-4 chr5 43692400 43692602 + 2.02801025126771 NA intron (NM_001359906, intron 12 of 37) intron (NM_001359906, intron 12 of 37) 30122 NM_001359903 231214 Mm.44434 NM_172274 ENSMUSG00000039765 Cc2d2a 5730509K17Rik|b2b1035Clo coiled-coil and C2 domain containing 2A protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-21 chr6 89413234 89413741 + 2.02801025126771 NA intron (NM_001167736, intron 5 of 6) intron (NM_001167736, intron 5 of 6) -50874 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-18 chr4 119056826 119057178 + 2.02801025126771 NA intron (NR_131914, intron 1 of 1) intron (NR_131914, intron 1 of 1) 12109 NR_131914 433751 Mm.224312 NR_131914 ENSMUSG00000066060 Gm12866 - predicted gene 12866 ncRNA unique_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-10 chr11 97813266 97813566 + 2.02801025126771 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 13851 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_23_6_1.50352072438765_3.55911528425143_2.02801025126771-3 chr2 152793149 152793512 + 2.02801025126771 NA intron (NM_009743, intron 2 of 2) B1F|SINE|Alu 35159 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_6_20_-1.84650836984035_3.46906323785859_2.0280102512677-4 chr8 74557921 74558321 + 2.0280102512677 NA Intergenic Intergenic -315053 NM_027837 71597 Mm.158735 NM_027837 ENSMUSG00000031621 Isx 9130012O13Rik|Pix-1 intestine specific homeobox protein-coding common_peak2_6_20_-1.84650836984035_3.46906323785859_2.0280102512677 chr17 66960289 66960522 + 2.0280102512677 NA intron (NM_001357625, intron 7 of 32) intron (NM_001357625, intron 7 of 32) 65830 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA unique_peak2_6_20_-1.84650836984035_3.46906323785859_2.0280102512677-3 chr5 13402874 13403243 + 2.0280102512677 NA intron (NM_001243073, intron 2 of 17) intron (NM_001243073, intron 2 of 17) 3749 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding unique_peak2_6_20_-1.84650836984035_3.46906323785859_2.0280102512677 chr10 81407996 81408392 + 2.0280102512677 NA exon (NM_008688, exon 5 of 10) exon (NM_008688, exon 5 of 10) -1381 NR_152732 102634174 Mm.392213 NR_152732 ENSMUSG00000085327 Gm16104 - predicted gene 16104 ncRNA unique_peak2_6_20_-1.84650836984035_3.46906323785859_2.0280102512677-2 chr12 33589021 33589370 + 2.0280102512677 NA Intergenic PB1D10|SINE|Alu 159571 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding unique_peak1_72_33_0.816952594315588_5.49593913840813_2.02794041588715 chr1 71762139 71763384 + 2.02794041588715 NA Intergenic Intergenic 109426 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak1_72_33_0.816952594315588_5.49593913840813_2.02794041588715 chr15 59596376 59597324 + 2.02794041588715 NA intron (NM_026746, intron 6 of 6) intron (NM_026746, intron 6 of 6) -51804 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_39_60_-0.888095374164457_5.48668965048066_2.02794041588715 chr2 160366482 160367615 + 2.02794041588715 NA promoter-TSS (NM_010658) promoter-TSS (NM_010658) 17 NM_010658 16658 Mm.330745 NM_010658 ENSMUSG00000074622 Mafb Kreisler|Krml|Krml1|kr v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) protein-coding common_peak2_39_60_-0.888095374164457_5.48668965048066_2.02794041588715-3 chr4 82505975 82506457 + 2.02794041588715 NA promoter-TSS (NM_001113210) promoter-TSS (NM_001113210) -437 NM_008687 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_39_60_-0.888095374164457_5.48668965048066_2.02794041588715-2 chr3 121706393 121707090 + 2.02794041588715 NA Intergenic Intergenic -16796 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_77_36_0.789865431480374_5.60438608136914_2.0264379246532 chr17 87170537 87171692 + 2.0264379246532 NA Intergenic Intergenic 23828 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak2_77_36_0.789865431480374_5.60438608136914_2.0264379246532 chr11 94957567 94957956 + 2.0264379246532 NA Intergenic Intergenic -9832 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding common_peak2_43_64_-0.843192410431394_5.60077160781276_2.02643792465319 chr16 24496090 24496697 + 2.02643792465319 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -32921 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_154_86_0.540107962884688_6.71299747729107_2.02550290799416 chr1 159231750 159233058 + 2.02550290799416 NA 5' UTR (NM_001360878, exon 1 of 20) 5' UTR (NM_001360878, exon 1 of 20) 204 NM_011931 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Cop1 AI316802|C80879|Rfwd2 COP1, E3 ubiquitin ligase protein-coding common_peak2_307_317_-0.346158462259652_8.13980372415453_2.02423143589992 chr15 78876384 78878428 + 2.02423143589992 NA 5' UTR (NM_145929, exon 1 of 17) 5' UTR (NM_145929, exon 1 of 17) 216 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding common_peak2_93_116_-0.603758395854594_6.56848552165611_2.02417110891564 chr5 149376106 149377895 + 2.02417110891564 NA Intergenic Intergenic -34749 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_135_157_-0.50805984998714_7.04975082318353_2.02404010746421 chr17 46554700 46556116 + 2.02404010746421 NA exon (NM_020493, exon 1 of 7) exon (NM_020493, exon 1 of 7) 754 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding common_peak1_59_25_0.923037847484793_5.16195864188349_2.02221055290443 chr12 25110642 25111144 + 2.02221055290443 NA Intergenic Intergenic -14801 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_59_25_0.923037847484793_5.16195864188349_2.02221055290443 chr17 56256138 56256606 + 2.02221055290443 NA promoter-TSS (NM_010192) promoter-TSS (NM_010192) -421 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding unique_peak2_29_49_-1.0133236445756_5.13719436748693_2.02221055290443 chr4 126227213 126227938 + 2.02221055290443 NA Intergenic Intergenic -24865 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_29_49_-1.0133236445756_5.13719436748693_2.02221055290443 chr17 28143822 28144792 + 2.02221055290443 NA intron (NM_001004366, intron 1 of 21) intron (NM_001004366, intron 1 of 21) 1781 NM_001004366 268935 Mm.258491 NM_001004366 ENSMUSG00000038677 Scube3 CEGF3|D030038I21Rik signal peptide, CUB domain, EGF-like 3 protein-coding common_peak2_29_49_-1.0133236445756_5.13719436748693_2.02221055290443-2 chr6 127971133 127971839 + 2.02221055290443 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 83864 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_200_219_-0.426026073230061_7.56834667690963_2.02204013479463 chr5 31697148 31699063 + 2.02204013479463 NA promoter-TSS (NM_181282) promoter-TSS (NM_181282) 55 NM_144541 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Babam2 6030405P19Rik|AI429776|B830038C02Rik|Bre BRISC and BRCA1 A complex member 2 protein-coding unique_peak2_21_39_-1.13569771271706_4.75407923852883_2.02129774107187-3 chr2 91202884 91203600 + 2.02129774107187 NA intron (NM_001357067, intron 1 of 10) intron (NM_001357067, intron 1 of 10) 330 NM_007387 11432 Mm.45570 NM_007387 ENSMUSG00000002103 Acp2 Acp-2|LAP acid phosphatase 2, lysosomal protein-coding unique_peak2_21_39_-1.13569771271706_4.75407923852883_2.02129774107187 chr13 69583565 69584350 + 2.02129774107187 NA intron (NM_175283, intron 4 of 4) intron (NM_175283, intron 4 of 4) 27506 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding unique_peak2_21_39_-1.13569771271706_4.75407923852883_2.02129774107187-5 chr9 20951841 20952559 + 2.02129774107187 NA 5' UTR (NM_001199433, exon 1 of 39) 5' UTR (NM_001199433, exon 1 of 39) 423 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding unique_peak2_21_39_-1.13569771271706_4.75407923852883_2.02129774107187-2 chr15 11636862 11637357 + 2.02129774107187 NA Intergenic Intergenic -237451 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_21_39_-1.13569771271706_4.75407923852883_2.02129774107187-4 chr8 60810875 60811484 + 2.02129774107187 NA Intergenic Intergenic -79214 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_46_18_1.02573378985847_4.76079440837282_2.02129774107186-4 chr19 59591657 59592000 + 2.02129774107186 NA Intergenic Intergenic 98692 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak1_46_18_1.02573378985847_4.76079440837282_2.02129774107186-2 chr7 75795916 75796396 + 2.02129774107186 NA Intergenic Intergenic -52182 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_46_18_1.02573378985847_4.76079440837282_2.02129774107186 chr16 11065443 11066029 + 2.02129774107186 NA promoter-TSS (NM_009223) promoter-TSS (NM_009223) -562 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding unique_peak1_46_18_1.02573378985847_4.76079440837282_2.02129774107186-2 chr11 67919090 67919692 + 2.02129774107186 NA intron (NM_173754, intron 1 of 14) intron (NM_173754, intron 1 of 14) 2762 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding unique_peak1_46_18_1.02573378985847_4.76079440837282_2.02129774107186 chr1 189778729 189779443 + 2.02129774107186 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 50818 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak1_46_18_1.02573378985847_4.76079440837282_2.02129774107186-3 chr17 56218023 56218482 + 2.02129774107186 NA 5' UTR (NM_001360284, exon 1 of 21) 5' UTR (NM_001360284, exon 1 of 21) 233 NM_001360284 224897 Mm.205535 NM_172624 ENSMUSG00000001229 Dpp9 6430584G11Rik|A330078I11|DPP IX|DPRP2 dipeptidylpeptidase 9 protein-coding common_peak1_169_96_0.515464954756714_6.85764531956548_2.01922694995934 chr10 4266355 4268228 + 2.01922694995934 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 962 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak2_63_86_-0.72701341077742_6.07943679046002_2.01863005342678 chr13 16760187 16761465 + 2.01863005342678 NA Intergenic Intergenic -737403 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak2_64_86_-0.70480340221298_6.09054179474224_2.01863005342678 chr1 74391621 74392400 + 2.01863005342678 NA intron (NM_153088, intron 1 of 6) CpG 401 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-8 chr7 144031777 144032399 + 2.01759298435799 NA Intergenic Intergenic 22834 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-3 chr9 18473518 18474034 + 2.01759298435799 NA promoter-TSS (NM_028935) promoter-TSS (NM_028935) -131 NM_028160 72230 Mm.289689 NM_028160 ENSMUSG00000074500 Zfp558 1700007A21Rik|4932704I17Rik|Zfp558-ps zinc finger protein 558 protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-4 chr2 91264408 91265012 + 2.01759298435799 NA promoter-TSS (NM_001166024) promoter-TSS (NM_001166024) -405 NM_001166024 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799-3 chr6 29317780 29318268 + 2.01759298435799 NA Intergenic Intergenic -1116 NM_001289663 330277 Mm.87624 NM_207258 ENSMUSG00000039742 Fam71f1 GARI-L1|Gm764|NYD-SP18 family with sequence similarity 71, member F1 protein-coding common_peak1_16_33_-1.27057700434064_4.45217433908002_2.01759298435799 chr5 31577075 31577325 + 2.01759298435799 NA Intergenic Intergenic -5803 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-2 chr11 120185390 120185956 + 2.01759298435799 NA TTS (NR_030682) TTS (NR_030682) 4183 NR_030682 100042332 Mm.269766 NR_030682 2810410L24Rik - RIKEN cDNA 2810410L24 gene ncRNA unique_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799-4 chr8 11558623 11559040 + 2.01759298435799 NA intron (NM_001302459, intron 1 of 1) intron (NM_001302459, intron 1 of 1) 421 NM_001302459 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-7 chr5 135369992 135370452 + 2.01759298435799 NA exon (NM_145414, exon 2 of 10) exon (NM_145414, exon 2 of 10) 269 NM_145414 100609 Mm.281189 NM_145414 ENSMUSG00000000916 Nsun5 9830109N13Rik|AI326939|Nol1r|Wbscr20|Wbscr20a NOL1/NOP2/Sun domain family, member 5 protein-coding common_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799 chr17 34591794 34592127 + 2.01759298435799 NA promoter-TSS (NM_017463) promoter-TSS (NM_017463) -511 NM_017463 18515 Mm.390957 NM_017463 ENSMUSG00000034673 Pbx2 AU043397|G17 pre B cell leukemia homeobox 2 protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799 chr10 127615576 127616207 + 2.01759298435799 NA intron (NM_008512, intron 1 of 88) intron (NM_008512, intron 1 of 88) 5257 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-2 chr6 87811450 87811806 + 2.01759298435799 NA 5' UTR (NM_001039394, exon 1 of 3) 5' UTR (NM_001039394, exon 1 of 3) 151 NM_001039394 69834 Mm.37380 NM_133717 ENSMUSG00000030055 Rab43 1810048P08Rik|2500004H21Rik|AW490415 RAB43, member RAS oncogene family protein-coding common_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799-3 chr4 155869679 155869965 + 2.01759298435799 NA promoter-TSS (NM_024472) promoter-TSS (NM_024472) 255 NM_028020 71957 Mm.475640 NM_028020 ENSMUSG00000029034 Ints11 2410006F12Rik|AU044035|Cpsf3l integrator complex subunit 11 protein-coding unique_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799-2 chr3 116805132 116805601 + 2.01759298435799 NA intron (NM_001362367, intron 2 of 27) intron (NM_001362367, intron 2 of 27) 2800 NM_001362367 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-5 chr2 151875411 151876081 + 2.01759298435799 NA Intergenic Intergenic 32819 NM_001040689 228770 Mm.159868 NM_001040689 ENSMUSG00000032852 Rspo4 A730099F22|A930029K19Rik R-spondin 4 protein-coding common_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799 chr17 27799684 27800107 + 2.01759298435799 NA intron (NM_001033279, intron 1 of 4) intron (NM_001033279, intron 1 of 4) 20647 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding unique_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799 chr2 180456391 180457016 + 2.01759298435799 NA intron (NR_149314, intron 1 of 11) CpG 458 NR_149314 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-6 chr3 101691838 101692655 + 2.01759298435799 NA Intergenic MIR|SINE|MIR -87539 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_16_33_-1.27057700434064_4.45217433908002_2.01759298435799-2 chr2 163347841 163348243 + 2.01759298435799 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 49931 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding unique_peak1_39_14_1.13575136778991_4.47476627950347_2.01759298435799-3 chr15 81915137 81915643 + 2.01759298435799 NA TTS (NM_080633) TTS (NM_080633) 10823 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak2_88_111_-0.619047695657676_6.49783107422877_2.01748919819404-2 chr19 61226427 61227931 + 2.01748919819404 NA exon (NM_009970, exon 3 of 12) exon (NM_009970, exon 3 of 12) 1239 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_88_111_-0.619047695657676_6.49783107422877_2.01748919819404 chr13 54621850 54622493 + 2.01748919819404 NA intron (NM_178397, intron 1 of 10) CpG 387 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding common_peak2_186_205_-0.434589291040746_7.46920588166285_2.01595217968752 chr12 101975364 101977135 + 2.01595217968752 NA intron (NM_016856, intron 1 of 14) CpG 275 NM_016856 51786 Mm.716 NM_016856 ENSMUSG00000041781 Cpsf2 100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367 cleavage and polyadenylation specific factor 2 protein-coding common_peak1_43_16_1.09171256134672_4.6333191219237_2.01522565129858-2 chr12 111665435 111665960 + 2.01522565129858 NA Intergenic Intergenic 6641 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding unique_peak2_18_36_-1.23323493151056_4.59283589987367_2.01522565129858 chr2 145681035 145681757 + 2.01522565129858 NA Intergenic Intergenic -19799 NR_033220 408057 Mm.486711 NR_033220 ENSMUSG00000087594 BC039771 - cDNA sequence BC039771 ncRNA unique_peak1_43_16_1.09171256134672_4.6333191219237_2.01522565129858-2 chr3 138210956 138211401 + 2.01522565129858 NA non-coding (NR_045760, exon 3 of 3) non-coding (NR_045760, exon 3 of 3) -6595 NM_009626 11529 Mm.8473 NM_009626 ENSMUSG00000055301 Adh7 AI325182|Adh-3|Adh-3e|Adh-3t|Adh3|Adh3-e|Adh3-t|Adh4|Adt-1 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding unique_peak1_43_16_1.09171256134672_4.6333191219237_2.01522565129858 chr13 12817794 12818323 + 2.01522565129858 NA Intergenic Intergenic -17979 NM_011118 18812 Mm.457984 NM_011118 ENSMUSG00000056457 Prl2c3 Ghd1|MRP-2|MRP-3|Mrpplf3|PLF-2|PLF-3|Plf2|Prl2c4|mrp/plf3 prolactin family 2, subfamily c, member 3 protein-coding common_peak1_43_16_1.09171256134672_4.6333191219237_2.01522565129858 chr11 3290776 3291300 + 2.01522565129858 NA exon (NM_001253691, exon 1 of 5) exon (NM_001253691, exon 1 of 5) 581 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding common_peak2_43_16_1.09171256134672_4.6333191219237_2.01522565129858 chr3 116113851 116114352 + 2.01522565129858 NA intron (NM_011693, intron 8 of 8) intron (NM_011693, intron 8 of 8) 15587 NM_011693 22329 Mm.76649 NM_011693 ENSMUSG00000027962 Vcam1 CD106|Vcam-1 vascular cell adhesion molecule 1 protein-coding common_peak1_43_16_1.09171256134672_4.6333191219237_2.01522565129858-3 chr17 75112640 75112985 + 2.01522565129858 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -65969 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak2_18_36_-1.23323493151056_4.59283589987367_2.01522565129858-3 chr9 60794584 60795428 + 2.01522565129858 NA intron (NM_001357408, intron 1 of 19) intron (NM_001357408, intron 1 of 19) 564 NM_001357407 72565 Mm.68819 NM_028283 ENSMUSG00000034485 Uaca 2700059D02Rik|nucling uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding common_peak2_18_36_-1.23323493151056_4.59283589987367_2.01522565129858 chr5 122850194 122850517 + 2.01522565129858 NA intron (NM_030564, intron 1 of 5) CpG 167 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding unique_peak2_18_36_-1.23323493151056_4.59283589987367_2.01522565129858-2 chr7 27928986 27929508 + 2.01522565129858 NA intron (NM_028538, intron 1 of 3) CpG 183 NM_028538 73430 Mm.379224 NM_028538 ENSMUSG00000070709 Zfp974 1700049G17Rik|AV321011|BB026409 zinc finger protein 974 protein-coding common_peak1_83_106_-0.63598726995501_6.42347335142364_2.01262969569537 chr17 10317546 10318528 + 2.01262969569537 NA intron (NM_021881, intron 1 of 6) intron (NM_021881, intron 1 of 6) 1324 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak2_129_69_0.601802097117537_6.43018406550373_2.01262969569537 chr18 52528647 52529651 + 2.01262969569537 NA exon (NM_010728, exon 1 of 7) exon (NM_010728, exon 1 of 7) 572 NM_001286181 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak2_69_91_-0.679260943084454_6.18393148451479_2.01236895003106 chr15 10818541 10819428 + 2.01236895003106 NA Intergenic Intergenic -10067 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak1_69_91_-0.679260943084454_6.18393148451479_2.01236895003106 chr2 60703630 60704307 + 2.01236895003106 NA intron (NM_001159564, intron 1 of 17) MIRc|SINE|MIR 18635 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_193_112_0.484376612422646_7.06236726862651_2.01115077987131 chr11 50291227 50292345 + 2.01115077987131 NA exon (NM_175334, exon 1 of 5) exon (NM_175334, exon 1 of 5) 550 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding common_peak2_73_96_-0.67600708070293_6.26190930183566_2.00965219411469 chr18 23954312 23955305 + 2.00965219411469 NA 5' UTR (NM_027007, exon 1 of 4) 5' UTR (NM_027007, exon 1 of 4) 120 NM_027007 69256 Mm.218343 NM_027007 ENSMUSG00000024276 Zfp397 2810411K16Rik|6720480F11Rik|AI461664 zinc finger protein 397 protein-coding common_peak1_156_87_0.541985692387109_6.73042446483085_2.0092612743118 chr8 110919853 110921426 + 2.0092612743118 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 774 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak2_156_87_0.541985692387109_6.73042446483085_2.0092612743118 chr8 85060277 85061654 + 2.0092612743118 NA promoter-TSS (NR_110581) promoter-TSS (NR_110581) -505 NR_110581 320466 Mm.401371 NR_110581 ENSMUSG00000087026 A230103J11Rik - RIKEN cDNA A230103J11 gene ncRNA common_peak1_142_78_0.56383780508403_6.58569965071912_2.00625476860766 chr4 32404483 32406322 + 2.00625476860766 NA Intergenic Intergenic -12033 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_350_222_0.353035122070684_7.97741746095565_2.00534784576827 chr19 6233085 6235749 + 2.00534784576827 NA intron (NM_198168, intron 2 of 13) intron (NM_198168, intron 2 of 13) 1423 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak2_124_146_-0.524771563503421_6.93728656308465_2.00518653967297 chr19 53553900 53555202 + 2.00518653967297 NA Intergenic Intergenic 25233 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_51_73_-0.790970170747081_5.81396828025541_2.00509512107875 chr4 21931078 21931822 + 2.00509512107875 NA 5' UTR (NM_175234, exon 1 of 6) 5' UTR (NM_175234, exon 1 of 6) 124 NM_175234 76132 Mm.159689 NM_175234 ENSMUSG00000028246 Faxc 6230409E13Rik|AW742931 failed axon connections homolog protein-coding common_peak1_88_43_0.72887560776263_5.82386942251861_2.00509512107874 chr14 70099845 70100640 + 2.00509512107874 NA intron (NM_021328, intron 1 of 8) CpG 149 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding common_peak1_244_147_0.429451717344496_7.4241792243012_2.00448872661417 chr4 43560849 43563816 + 2.00448872661417 NA promoter-TSS (NM_013497) promoter-TSS (NM_013497) 251 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_64_28_0.880159098508176_5.29806054438166_2.00421908169978 chr10 84400409 84401193 + 2.00421908169978 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 39670 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak1_63_28_0.857949089943736_5.28695554009944_2.00421908169978-2 chr4 135972101 135972957 + 2.00421908169978 NA promoter-TSS (NM_011942) promoter-TSS (NM_011942) 65 NM_011942 26394 Mm.34302 NM_011942 ENSMUSG00000028670 Lypla2 LysoII lysophospholipase 2 protein-coding unique_peak2_33_53_-0.945056644827017_5.28235917974996_2.00421908169978 chr11 68090134 68090994 + 2.00421908169978 NA intron (NM_018768, intron 6 of 7) intron (NM_018768, intron 6 of 7) 124106 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding unique_peak1_63_28_0.857949089943736_5.28695554009944_2.00421908169978 chr11 49247874 49248627 + 2.00421908169978 NA intron (NM_001110149, intron 1 of 1) intron (NM_001110149, intron 1 of 1) 773 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_33_53_-0.945056644827017_5.28235917974996_2.00421908169978 chr19 4099992 4100512 + 2.00421908169978 NA promoter-TSS (NM_008851) promoter-TSS (NM_008851) 254 NR_075078 18739 Mm.1860 NM_008851 ENSMUSG00000024851 Pitpnm1 DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1 phosphatidylinositol transfer protein, membrane-associated 1 protein-coding common_peak1_202_118_0.474699328070209_7.13216742734305_2.00388517261384 chr8 105344368 105346571 + 2.00388517261384 NA intron (NM_177699, intron 1 of 21) intron (NM_177699, intron 1 of 21) 2501 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak2_144_165_-0.487524490789022_7.13127718595241_2.00388517261379 chr9 92249689 92251769 + 2.00388517261379 NA intron (NM_011636, intron 1 of 8) intron (NM_011636, intron 1 of 8) 535 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding common_peak1_99_50_0.682818540607569_6.01383461227528_2.00246661640304 chr3 108554078 108554722 + 2.00246661640304 NA promoter-TSS (NR_028538) promoter-TSS (NR_028538) 2 NR_028538 100217438 NR_028538 Scarna2 MBII-382 small Cajal body-specific RNA 2 ncRNA common_peak2_99_50_0.682818540607569_6.01383461227528_2.00246661640304 chr5 23431717 23432799 + 2.00246661640304 NA non-coding (NR_040469, exon 1 of 1) non-coding (NR_040469, exon 1 of 1) 2095 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_60_82_-0.727883362044048_6.0110977503249_2.00246661640303 chr5 88554471 88555246 + 2.00246661640303 NA exon (NM_023054, exon 1 of 1) exon (NM_023054, exon 1 of 1) 396 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding unique_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753 chr10 19127538 19127815 + 2.00244947055753 NA Intergenic Intergenic -14073 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753 chr1 135944152 135944699 + 2.00244947055753 NA Intergenic Intergenic -25218 NM_019645 18772 Mm.4494 NM_019645 ENSMUSG00000026413 Pkp1 - plakophilin 1 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-18 chrX 77796336 77796799 + 2.00244947055753 NA promoter-TSS (NM_016979) promoter-TSS (NM_016979) -607 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding unique_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753-6 chr8 11395389 11395741 + 2.00244947055753 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -82364 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753-2 chr12 16865044 16865443 + 2.00244947055753 NA Intergenic Intergenic -29735 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-2 chr11 99465279 99465934 + 2.00244947055753 NA Intergenic (TATG)n|Simple_repeat|Simple_repeat -27453 NM_023256 66809 Mm.28042 NM_023256 ENSMUSG00000035775 Krt20 9030623C06Rik|Ck-20|Ck20|K20|Krt21 keratin 20 protein-coding unique_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753-5 chr7 112258651 112259172 + 2.00244947055753 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 33075 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753 chr1 89474912 89475234 + 2.00244947055753 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 20262 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-3 chr3 88984506 88984789 + 2.00244947055753 NA exon (NM_138679, exon 2 of 27) exon (NM_138679, exon 2 of 27) 18835 NM_138679 192195 Mm.130752 NM_138679 ENSMUSG00000028053 Ash1l 8030453L17Rik|Ash1|E430018P19Rik|Kmt2h ASH1 like histone lysine methyltransferase protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-16 chr8 117385697 117385982 + 2.00244947055753 NA intron (NM_028941, intron 3 of 20) intron (NM_028941, intron 3 of 20) 36669 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-3 chr15 7876778 7877250 + 2.00244947055753 NA intron (NM_001081402, intron 17 of 17) intron (NM_001081402, intron 17 of 17) 61464 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-5 chr17 67033008 67033477 + 2.00244947055753 NA intron (NM_001357625, intron 7 of 32) intron (NM_001357625, intron 7 of 32) -7007 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA unique_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753-4 chr4 154927656 154928045 + 2.00244947055753 NA intron (NM_178931, intron 1 of 7) intron (NM_178931, intron 1 of 7) 227 NM_178931 230979 Mm.215147 NM_178931 ENSMUSG00000042333 Tnfrsf14 Atar|HveA|Hvem|Tnfrs14 tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-10 chr3 89897340 89897790 + 2.00244947055753 NA intron (NM_010559, intron 1 of 9) intron (NM_010559, intron 1 of 9) 15631 NM_001310676 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-6 chr18 5603798 5604166 + 2.00244947055753 NA intron (NM_001360981, intron 2 of 8) intron (NM_001360981, intron 2 of 8) 11335 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-8 chr2 29788303 29788711 + 2.00244947055753 NA promoter-TSS (NM_001290496) promoter-TSS (NM_001290496) -836 NM_001290495 227682 Mm.245739 NM_145520 ENSMUSG00000039826 Trub2 G430055L02Rik TruB pseudouridine (psi) synthase family member 2 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-14 chr5 149134089 149134582 + 2.00244947055753 NA intron (NR_015478, intron 1 of 2) intron (NR_015478, intron 1 of 2) -9928 NR_137278 105242579 Mm.445929 NR_137278 ENSMUSG00000107388 Gm42788 - predicted gene 42788 ncRNA unique_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753-3 chr17 75470028 75470385 + 2.00244947055753 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 4668 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-11 chr3 143777535 143777969 + 2.00244947055753 NA Intergenic Intergenic -65609 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-9 chr3 27648340 27648801 + 2.00244947055753 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 61882 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-15 chr6 108304218 108304897 + 2.00244947055753 NA intron (NM_010585, intron 4 of 61) intron (NM_010585, intron 4 of 61) 91461 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-12 chr4 46371468 46371720 + 2.00244947055753 NA Intergenic Intergenic 17829 NM_029086 74753 Mm.45973 NM_029086 ENSMUSG00000028331 Trmo 5830415F09Rik|AV014846|Nap1 tRNA methyltransferase O protein-coding common_peak2_10_25_-1.50715435639754_3.94686253994232_2.00244947055753 chr10 17355544 17355775 + 2.00244947055753 NA Intergenic Intergenic -259877 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-7 chr18 36285964 36286284 + 2.00244947055753 NA intron (NM_008989, intron 1 of 1) intron (NM_008989, intron 1 of 1) 4962 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-2 chr16 4601700 4602301 + 2.00244947055753 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 7287 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-13 chr5 23675551 23675964 + 2.00244947055753 NA exon (NM_001359172, exon 2 of 17) exon (NM_001359172, exon 2 of 17) 210 NM_001359174 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-4 chr15 57617511 57617920 + 2.00244947055753 NA Intergenic B3|SINE|B2 -76952 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding unique_peak1_29_9_1.30860445031177_3.97623032004325_2.00244947055753-17 chr9 106280627 106280996 + 2.00244947055753 NA promoter-TSS (NM_027354) promoter-TSS (NM_027354) -250 NM_027354 70235 Mm.23054 NM_027354 ENSMUSG00000023345 Poc1a 2510040D07Rik|Wdr51a|cha POC1 centriolar protein A protein-coding common_peak1_136_74_0.577396883619899_6.51751713230583_1.99876736378458 chr14 76110009 76111480 + 1.99876736378458 NA promoter-TSS (NM_013745) promoter-TSS (NM_013745) 71 NM_026177 67467 Mm.260767 NM_026177 ENSMUSG00000022008 Gpalpp1 1200011I18Rik|Kiaa1704 GPALPP motifs containing 1 protein-coding common_peak2_101_123_-0.570584830396213_6.66890389518877_1.99837208065853 chr4 133812934 133814180 + 1.99837208065853 NA Intergenic CpG -59946 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding unique_peak1_55_23_0.939681613497524_5.05480330746992_1.99811292136509-2 chr16 33836136 33836650 + 1.99811292136509 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 6728 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_55_23_0.939681613497524_5.05480330746992_1.99811292136509 chr13 63325234 63326389 + 1.99811292136509 NA non-coding (NR_110521, exon 6 of 6) non-coding (NR_110521, exon 6 of 6) -24528 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak1_55_23_0.939681613497524_5.05480330746992_1.99811292136509-3 chr6 91489872 91490734 + 1.99811292136509 NA intron (NM_009531, intron 15 of 15) intron (NM_009531, intron 15 of 15) 16552 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak2_47_69_-0.825462350072961_5.71655184190849_1.9967981614991-2 chr11 86569499 86570266 + 1.9967981614991 NA Intergenic Intergenic 14276 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_47_69_-0.825462350072961_5.71655184190849_1.9967981614991-3 chr4 88782070 88782666 + 1.9967981614991 NA 5' UTR (NM_197889, exon 1 of 1) 5' UTR (NM_197889, exon 1 of 1) 237 NM_197889 319146 Mm.368232 NM_197889 ENSMUSG00000096854 Ifnz 6030405N23Rik|BGIF|Lmtn interferon zeta protein-coding common_peak2_48_69_-0.795924873578912_5.73132058015551_1.9967981614991-2 chr9 67234448 67235381 + 1.9967981614991 NA intron (NM_001081242, intron 53 of 57) intron (NM_001081242, intron 53 of 57) 1812 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak1_83_40_0.747927711828052_5.73151586053211_1.9967981614991 chr12 59095450 59096112 + 1.9967981614991 NA promoter-TSS (NM_177321) promoter-TSS (NM_177321) -19 NM_001329047 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak2_83_40_0.747927711828052_5.73151586053211_1.9967981614991 chr1 21052032 21052743 + 1.9967981614991 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 26838 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding unique_peak1_83_40_0.747927711828052_5.73151586053211_1.9967981614991 chr15 101942648 101943697 + 1.9967981614991 NA Intergenic Intergenic -2848 NM_146063 223917 Mm.162744 NM_146063 ENSMUSG00000061397 Krt79 BC031593 keratin 79 protein-coding common_peak2_48_69_-0.795924873578912_5.73132058015551_1.9967981614991 chr12 80113589 80114383 + 1.9967981614991 NA promoter-TSS (NM_007564) promoter-TSS (NM_007564) -973 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak2_47_69_-0.825462350072961_5.71655184190849_1.9967981614991 chr10 99203710 99204971 + 1.9967981614991 NA Intergenic Intergenic -58891 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-15 chr14 67887067 67887337 + 1.99473478107052 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) -27457 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-23 chr18 24714729 24714988 + 1.99473478107052 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 6235 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-14 chr14 20913283 20913564 + 1.99473478107052 NA Intergenic Intergenic -15975 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-10 chr6 55173579 55173823 + 1.99473478107052 NA intron (NM_009349, intron 1 of 2) intron (NM_009349, intron 1 of 2) 1289 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-34 chr5 115341385 115341750 + 1.99473478107052 NA promoter-TSS (NM_029645) promoter-TSS (NM_029645) 320 NM_026933 69076 Mm.27951 NM_026933 ENSMUSG00000029535 Triap1 1810015M01Rik|AU020874|AU043831|P53csv|Wf-1 TP53 regulated inhibitor of apoptosis 1 protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-6 chr3 145759915 145760145 + 1.99473478107052 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 1338 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-8 chr11 45175179 45175452 + 1.99473478107052 NA Intergenic Intergenic -58387 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052 chr11 97429317 97429627 + 1.99473478107052 NA Intergenic B1_Mus2|SINE|Alu -20688 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-41 chr9 99632859 99633316 + 1.99473478107052 NA intron (NM_001311142, intron 1 of 15) intron (NM_001311142, intron 1 of 15) 3509 NM_001311142 72507 Mm.221455 NM_028258 ENSMUSG00000037784 Dzip1l 2610524A10Rik|AI663976 DAZ interacting protein 1-like protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-17 chr15 13237371 13237607 + 1.99473478107052 NA Intergenic Intergenic -63814 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-12 chr13 104025652 104025926 + 1.99473478107052 NA intron (NM_029447, intron 12 of 12) intron (NM_029447, intron 12 of 12) 83825 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-32 chr3 122333962 122334266 + 1.99473478107052 NA Intergenic Intergenic -40411 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-29 chr2 163994638 163994901 + 1.99473478107052 NA promoter-TSS (NM_018753) promoter-TSS (NM_018753) -428 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-42 chrX 72917642 72918120 + 1.99473478107052 NA promoter-TSS (NM_010941) promoter-TSS (NM_010941) 463 NM_019405 26370 Mm.24643 NM_019405 ENSMUSG00000031347 Cetn2 1110034A02Rik|AI326150|Calt|caltractin centrin 2 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-25 chr19 23329712 23329980 + 1.99473478107052 NA intron (NM_174857, intron 11 of 13) intron (NM_174857, intron 11 of 13) -55949 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052 chr1 23264366 23264738 + 1.99473478107052 NA Intergenic Intergenic -7717 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-37 chr7 119720922 119721194 + 1.99473478107052 NA intron (NM_145585, intron 1 of 4) intron (NM_145585, intron 1 of 4) 2561 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-5 chr17 24038474 24038794 + 1.99473478107052 NA intron (NM_175440, intron 1 of 5) intron (NM_175440, intron 1 of 5) 391 NM_175440 213171 Mm.133083 NM_175440 ENSMUSG00000050762 Prss27 CAPH2|Mpn|marapsin protease, serine 27 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-6 chr10 117708975 117709230 + 1.99473478107052 NA intron (NM_001288586, intron 2 of 10) intron (NM_001288586, intron 2 of 10) 1656 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-27 chr2 14072904 14073228 + 1.99473478107052 NA intron (NR_038162, intron 1 of 1) intron (NR_038162, intron 1 of 1) 868 NR_038162 70957 Mm.399049 NR_038162 ENSMUSG00000086657 Stamos 4921530L18Rik signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand ncRNA unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-8 chr5 142463467 142463780 + 1.99473478107052 NA promoter-TSS (NM_172725) promoter-TSS (NM_172725) -308 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-39 chr9 56371018 56371477 + 1.99473478107052 NA intron (NM_172924, intron 2 of 6) B1_Mur4|SINE|Alu 46803 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-5 chr10 95322446 95322801 + 1.99473478107052 NA exon (NM_001330175, exon 2 of 3) exon (NM_001330175, exon 2 of 3) 1086 NM_001330138 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-11 chr8 91373877 91374162 + 1.99473478107052 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 60494 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-3 chr12 52475134 52475517 + 1.99473478107052 NA TTS (NR_136881) TTS (NR_136881) 5284 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-9 chr11 95309261 95309526 + 1.99473478107052 NA intron (NM_177619, intron 1 of 12) intron (NM_177619, intron 1 of 12) 853 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-21 chr16 57427992 57428230 + 1.99473478107052 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 74834 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-28 chr2 128543823 128544126 + 1.99473478107052 NA Intergenic Intergenic -48367 NM_001310641 241634 Mm.297682 NM_001310641 ENSMUSG00000074812 Spdye4c Gm355|SpeedyB3|SpyB3 speedy/RINGO cell cycle regulator family, member E4C protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-7 chr4 144988520 144988737 + 1.99473478107052 NA intron (NM_001276465, intron 67 of 69) intron (NM_001276465, intron 67 of 69) 95491 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-4 chr10 86293707 86294196 + 1.99473478107052 NA 3' UTR (NM_001164495, exon 7 of 7) 3' UTR (NM_001164495, exon 7 of 7) -6461 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-30 chr3 27617575 27618022 + 1.99473478107052 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -32803 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-40 chr9 64699538 64699842 + 1.99473478107052 NA intron (NM_001134399, intron 22 of 24) intron (NM_001134399, intron 22 of 24) 38066 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-19 chr15 89315522 89315745 + 1.99473478107052 NA promoter-TSS (NM_001170561) promoter-TSS (NM_001170561) -322 NM_001170561 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-2 chr10 75078286 75078647 + 1.99473478107052 NA intron (NM_001081412, intron 1 of 22) intron (NM_001081412, intron 1 of 22) 17570 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-35 chr5 140514711 140514939 + 1.99473478107052 NA intron (NM_021528, intron 1 of 1) PB1D10|SINE|Alu 9216 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-22 chr17 13744399 13744842 + 1.99473478107052 NA intron (NM_022311, intron 1 of 2) intron (NM_022311, intron 1 of 2) -15921 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-18 chr15 62048395 62048691 + 1.99473478107052 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 9286 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-24 chr19 18889309 18889582 + 1.99473478107052 NA intron (NM_153417, intron 38 of 38) intron (NM_153417, intron 38 of 38) 111672 NM_146095 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052 chr1 37890636 37890857 + 1.99473478107052 NA promoter-TSS (NM_026913) promoter-TSS (NM_026913) 269 NM_027098 107734 Mm.26614 NM_027098 ENSMUSG00000026087 Mrpl30 2310001L22Rik|L30mt|MRP-L28|MRP-L30|Rpml28 mitochondrial ribosomal protein L30 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-20 chr16 21210656 21210898 + 1.99473478107052 NA intron (NM_010143, intron 1 of 15) intron (NM_010143, intron 1 of 15) 5982 NM_010143 13845 Mm.6972 NM_010143 ENSMUSG00000005958 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-13 chr13 110916512 110916809 + 1.99473478107052 NA Intergenic Intergenic -12814 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-3 chr1 149903524 149903933 + 1.99473478107052 NA intron (NM_008869, intron 3 of 17) intron (NM_008869, intron 3 of 17) 18711 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-38 chr8 36167980 36168215 + 1.99473478107052 NA Intergenic Intergenic 12087 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-33 chr5 34526389 34526689 + 1.99473478107052 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 755 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-7 chr11 31355584 31355921 + 1.99473478107052 NA Intergenic Intergenic 14309 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-2 chr1 132295519 132295861 + 1.99473478107052 NA Intergenic Intergenic -2936 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-4 chr13 45953055 45953327 + 1.99473478107052 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 11800 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-12 chr9 31210418 31210830 + 1.99473478107052 NA intron (NM_001357698, intron 1 of 17) intron (NM_001357698, intron 1 of 17) 1224 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-16 chr14 101852337 101852590 + 1.99473478107052 NA intron (NM_001347628, intron 1 of 26) intron (NM_001347628, intron 1 of 26) 11840 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-11 chr13 43044005 43044371 + 1.99473478107052 NA intron (NM_001005740, intron 3 of 12) intron (NM_001005740, intron 3 of 12) -78651 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_5_18_-1.92294190785185_3.28645655951766_1.99473478107052-9 chr6 50456559 50456762 + 1.99473478107052 NA promoter-TSS (NM_001347213) promoter-TSS (NM_001347213) -306 NM_001347213 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-36 chr7 65011688 65011968 + 1.99473478107052 NA intron (NM_183087, intron 1 of 9) intron (NM_183087, intron 1 of 9) -138788 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-31 chr3 122103653 122103950 + 1.99473478107052 NA intron (NM_007378, intron 13 of 49) intron (NM_007378, intron 13 of 49) 59341 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-26 chr19 42056739 42057049 + 1.99473478107052 NA intron (NM_026152, intron 1 of 6) intron (NM_026152, intron 1 of 6) 4666 NM_025752 66765 Mm.440412 NM_025752 ENSMUSG00000090369 4933411K16Rik - RIKEN cDNA 4933411K16 gene protein-coding unique_peak1_21_5_1.60126788144915_3.38559644144573_1.99473478107052-10 chr11 97698479 97698692 + 1.99473478107052 NA intron (NM_001163307, intron 1 of 10) intron (NM_001163307, intron 1 of 10) 799 NM_001163307 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding common_peak2_36_57_-0.92702025407013_5.39447086809251_1.99427374707395 chr17 27909340 27909860 + 1.99427374707395 NA promoter-TSS (NM_026836) promoter-TSS (NM_026836) 294 NM_181413 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding unique_peak2_36_57_-0.92702025407013_5.39447086809251_1.99427374707395 chr1 120073149 120073941 + 1.99427374707395 NA intron (NM_019432, intron 1 of 1) intron (NM_019432, intron 1 of 1) 235 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding unique_peak2_36_57_-0.92702025407013_5.39447086809251_1.99427374707395-2 chr8 84742590 84743764 + 1.99427374707395 NA intron (NM_001081982, intron 2 of 9) (TG)n|Simple_repeat|Simple_repeat 31192 NM_001081981 18032 Mm.9394 NM_010906 ENSMUSG00000001911 Nfix CTF|NF-I/X|NF1-X|NFI-X nuclear factor I/X protein-coding common_peak1_68_31_0.823688904023709_5.41184445201185_1.99427374707394-3 chr9 72196405 72197197 + 1.99427374707394 NA Intergenic Intergenic -78087 NM_146224 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_68_31_0.823688904023709_5.41184445201185_1.99427374707394 chr10 13983084 13983502 + 1.99427374707394 NA intron (NM_001358782, intron 1 of 9) intron (NM_001358782, intron 1 of 9) 16914 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak1_69_31_0.844301012972559_5.42215050648628_1.99427374707394 chr4 108300260 108301057 + 1.99427374707394 NA intron (NM_001033634, intron 1 of 13) intron (NM_001033634, intron 1 of 13) 432 NM_001033634 414872 Mm.426241 NM_001033634 ENSMUSG00000034636 Zyg11b 1110046I03Rik|2810482G21Rik|D4Mgi23|Gm431|mKIAA1730 zyg-ll family member B, cell cycle regulator protein-coding common_peak1_68_31_0.823688904023709_5.41184445201185_1.99427374707394-2 chr2 29251719 29252892 + 1.99427374707394 NA intron (NR_029460, intron 1 of 1) CpG 688 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak1_65_87_-0.699420613812783_6.10972131173091_1.99380250813685 chr1 39900135 39900849 + 1.99380250813685 NA promoter-TSS (NM_001252201) promoter-TSS (NM_001252201) -421 NM_001252202 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak2_106_129_-0.570201775999296_6.73726692502881_1.99332458743494 chr6 133105245 133106389 + 1.99332458743494 NA 3' UTR (NM_001163445, exon 1 of 1) 3' UTR (NM_001163445, exon 1 of 1) 578 NR_073368 381820 Mm.291762 NM_001163445 ENSMUSG00000072704 Smim10l1 2700089E24Rik|AI662692 small integral membrane protein 10 like 1 protein-coding common_peak1_157_88_0.534779255735635_6.74312305883421_1.99332458743494 chr4 130176397 130177972 + 1.99332458743494 NA Intergenic Intergenic -2062 NM_023476 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak2_85_107_-0.615699951527279_6.44703752639983_1.99299809546428 chr4 63052600 63054491 + 1.99299809546428 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 87971 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak1_130_70_0.592315188937708_6.44590471397354_1.99299809546428 chr4 145245685 145246891 + 1.99299809546428 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 582 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_78_37_0.769640152831691_5.63274758985943_1.99170400593891 chr11 8578879 8579882 + 1.99170400593891 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 85155 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_78_37_0.769640152831691_5.63274758985943_1.99170400593891-3 chr9 45850312 45851263 + 1.99170400593891 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 12242 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak1_78_37_0.769640152831691_5.63274758985943_1.99170400593891-2 chr3 95231883 95232608 + 1.99170400593891 NA intron (NM_001038708, intron 2 of 4) intron (NM_001038708, intron 2 of 4) 3302 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak2_125_147_-0.523138046955359_6.94788434215127_1.99140909626453 chr8 124897563 124898789 + 1.99140909626453 NA promoter-TSS (NM_198103) promoter-TSS (NM_198103) 290 NM_001111141 244666 Mm.482915 NM_001111141 ENSMUSG00000031986 Sprtn Gm505 SprT-like N-terminal domain protein-coding common_peak1_113_135_-0.544518764050983_6.81520345922485_1.99069685329001 chr6 127148808 127150049 + 1.99069685329001 NA promoter-TSS (NR_040274) promoter-TSS (NR_040274) 39 NR_040274 77558 Mm.358918 NR_040273 ENSMUSG00000097166 9330179D12Rik - RIKEN cDNA 9330179D12 gene ncRNA common_peak2_164_93_0.518024072327512_6.81360088784139_1.99069685328999 chr3 90537047 90538283 + 1.99069685328999 NA intron (NM_001356605, intron 1 of 2) intron (NM_001356605, intron 1 of 2) 411 NM_001356605 67860 Mm.331185 NM_026416 ENSMUSG00000074457 S100a16 2300002L21Rik|AI325039|AI663996|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding common_peak1_73_34_0.794622744539232_5.52659438921458_1.99054019639513 chr11 117962383 117963350 + 1.99054019639513 NA Intergenic Intergenic 6500 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_73_34_0.794622744539232_5.52659438921458_1.99054019639513 chr18 5989406 5989999 + 1.99054019639513 NA Intergenic Intergenic 146396 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak1_73_34_0.794622744539232_5.52659438921458_1.99054019639513-2 chr6 34797257 34798240 + 1.99054019639513 NA intron (NM_001289656, intron 6 of 19) intron (NM_001289656, intron 6 of 19) 17316 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak2_322_202_0.369508391332138_7.85009011285125_1.99051996027798 chr2 13573528 13576664 + 1.99051996027798 NA intron (NM_011701, intron 1 of 8) intron (NM_011701, intron 1 of 8) 785 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak2_284_296_-0.358773124420773_8.03493255859038_1.9897155765277 chr19 47917879 47920468 + 1.9897155765277 NA 5' UTR (NM_001001738, exon 1 of 2) 5' UTR (NM_001001738, exon 1 of 2) 126 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding common_peak2_79_102_-0.650913543358032_6.3610437555042_1.98922720274677 chr6 124965029 124966117 + 1.98922720274677 NA promoter-TSS (NM_001164089) promoter-TSS (NM_001164089) -35 NM_001164089 26894 Mm.244536 NM_012003 ENSMUSG00000030127 Cops7a D6Ertd35e|SGN7a COP9 signalosome subunit 7A protein-coding common_peak1_96_118_-0.583207208896866_6.60321415885951_1.98870966170213 chr11 72794996 72796037 + 1.98870966170213 NA promoter-TSS (NM_001045536) promoter-TSS (NM_001045536) 323 NM_001024926 192986 Mm.194755 NM_001024926 ENSMUSG00000057778 Cyb5d2 9330151E16Rik|Gm2 cytochrome b5 domain containing 2 protein-coding common_peak2_96_118_-0.583207208896866_6.60321415885951_1.98870966170213 chr19 43673461 43674797 + 1.98870966170213 NA intron (NM_145156, intron 1 of 3) intron (NM_145156, intron 1 of 3) 752 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_94_47_0.696802873004625_5.93336393722347_1.98800616049073 chr15 84234976 84235625 + 1.98800616049073 NA intron (NM_133167, intron 1 of 12) intron (NM_133167, intron 1 of 12) 3257 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak1_94_47_0.696802873004625_5.93336393722347_1.98800616049073 chr15 76671677 76672511 + 1.98800616049073 NA intron (NR_152559, intron 1 of 8) intron (NR_152559, intron 1 of 8) 451 NM_033371 73062 Mm.322901 NM_033371 ENSMUSG00000033819 Ppp1r16a 2900084E10Rik|Mypt3|R75527 protein phosphatase 1, regulatory (inhibitor) subunit 16A protein-coding common_peak1_304_314_-0.346505009477013_8.12595551364877_1.98800454890023 chr15 78876431 78878403 + 1.98800454890023 NA 5' UTR (NM_145929, exon 1 of 17) 5' UTR (NM_145929, exon 1 of 17) 227 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding common_peak2_74_97_-0.671575379735446_6.27892215424749_1.9877995120027 chr12 98574030 98575470 + 1.9877995120027 NA promoter-TSS (NM_001316666) promoter-TSS (NM_001316666) -38 NM_001316665 72258 Mm.196158 NM_029911 ENSMUSG00000033854 Kcnk10 1700024D23Rik|3010005K24Rik|Trek2 potassium channel, subfamily K, member 10 protein-coding common_peak1_212_125_0.461121440861025_7.20784064393043_1.98724947609495 chr3 57574025 57575860 + 1.98724947609495 NA exon (NM_001168281, exon 2 of 7) exon (NM_001168281, exon 2 of 7) 934 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_195_114_0.473758133275191_7.08236911758197_1.98594487211432 chr5 104458841 104460293 + 1.98594487211432 NA 5' UTR (NM_008861, exon 1 of 15) 5' UTR (NM_008861, exon 1 of 15) 110 NM_008861 18764 Mm.6442 NM_008861 ENSMUSG00000034462 Pkd2 C030034P18Rik|PC2|TRPP2 polycystic kidney disease 2 protein-coding common_peak2_347_352_-0.321885708812946_8.30258151886471_1.98272383997146 chr1 64614536 64617817 + 1.98272383997146 NA intron (NM_025964, intron 1 of 2) L1MB8|LINE|L1 992 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding common_peak1_259_272_-0.368727006430593_7.90839363770456_1.97839371350186 chr19 5800046 5802207 + 1.97839371350186 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 1546 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_25_43_-1.03389344418218_4.9424848965462_1.97718016252453 chr12 111678175 111678771 + 1.97718016252453 NA 5' UTR (NM_177374, exon 1 of 3) 5' UTR (NM_177374, exon 1 of 3) 368 NM_177374 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding common_peak2_24_43_-1.09007777691175_4.91439273018142_1.97718016252453-2 chr7 68131166 68131771 + 1.97718016252453 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 132765 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak2_51_21_0.959051576244572_4.93895740675958_1.97718016252453 chr11 31555456 31555794 + 1.97718016252453 NA Intergenic Intergenic 116237 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_51_21_0.959051576244572_4.93895740675958_1.97718016252453-2 chr17 93380342 93381041 + 1.97718016252453 NA Intergenic Intergenic 181523 NM_009625 11516 Mm.3407 NM_009625 ENSMUSG00000024256 Adcyap1 PACAP adenylate cyclase activating polypeptide 1 protein-coding unique_peak1_51_21_0.959051576244572_4.93895740675958_1.97718016252453 chr10 97312483 97312952 + 1.97718016252453 NA Intergenic Intergenic -110761 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA common_peak1_51_21_0.959051576244572_4.93895740675958_1.97718016252453 chr12 24572341 24573025 + 1.97718016252453 NA intron (NM_001161406, intron 1 of 15) CpG 396 NM_001161406 195733 Mm.263068 NM_145890 ENSMUSG00000020656 Grhl1 LBP-32|MGR|Tcfcp2l2 grainyhead like transcription factor 1 protein-coding common_peak2_24_43_-1.09007777691175_4.91439273018142_1.97718016252453 chr12 79610671 79611388 + 1.97718016252453 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 313678 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_51_21_0.959051576244572_4.93895740675958_1.97718016252453-2 chr16 25262547 25262950 + 1.97718016252453 NA Intergenic Intergenic -24069 NM_175165 71338 Mm.126851 NM_175165 ENSMUSG00000048399 Tprg 5430420C16Rik|Tprg1 transformation related protein 63 regulated protein-coding common_peak1_51_21_0.959051576244572_4.93895740675958_1.97718016252453-2 chr4 150856455 150857184 + 1.97718016252453 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 1749 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_51_21_0.959051576244572_4.93895740675958_1.97718016252453 chr8 93040804 93041226 + 1.97718016252453 NA intron (NM_001013764, intron 3 of 13) intron (NM_001013764, intron 3 of 13) 7177 NM_001013764 244595 Mm.390089 NM_001013764 ENSMUSG00000071047 Ces1a Ces1l|EG244595|Gm4976 carboxylesterase 1A protein-coding common_peak1_24_43_-1.09007777691175_4.91439273018142_1.97718016252453 chr10 122848481 122849131 + 1.97718016252453 NA intron (NM_001110218, intron 4 of 9) intron (NM_001110218, intron 4 of 9) 136918 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak1_51_21_0.959051576244572_4.93895740675958_1.97718016252453-3 chr8 126698695 126699227 + 1.97718016252453 NA Intergenic Intergenic -105525 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_100_51_0.669058181116322_6.03496880869925_1.97656708196216-2 chr4 155839882 155841037 + 1.97656708196216 NA intron (NM_024263, intron 1 of 9) intron (NM_024263, intron 1 of 9) 779 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding common_peak2_100_51_0.669058181116322_6.03496880869925_1.97656708196216 chr6 117841286 117842041 + 1.97656708196216 NA intron (NM_001346650, intron 1 of 2) intron (NM_001346650, intron 1 of 2) 388 NM_001346652 232337 Mm.290847 NM_177684 ENSMUSG00000059689 Zfp637 AI646709|BC021601|Znf32 zinc finger protein 637 protein-coding common_peak1_100_51_0.669058181116322_6.03496880869925_1.97656708196216 chr3 81017565 81018931 + 1.97656708196216 NA Intergenic GA-rich|Low_complexity|Low_complexity -18168 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_101_51_0.68317176184957_6.04202559906588_1.97656708196216 chr4 62286733 62287935 + 1.97656708196216 NA intron (NM_025286, intron 1 of 3) intron (NM_025286, intron 1 of 3) 905 NM_025286 20530 Mm.292539 NM_025286 ENSMUSG00000066152 Slc31a2 AI604396|CTR2 solute carrier family 31, member 2 protein-coding common_peak2_53_74_-0.756271839595721_5.85068277069802_1.97555764737544 chr10 86779084 86780070 + 1.97555764737544 NA intron (NM_175331, intron 1 of 13) intron (NM_175331, intron 1 of 13) 572 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding common_peak1_52_74_-0.78304863522602_5.83729437288287_1.97555764737544 chr5 135168065 135168693 + 1.97555764737544 NA promoter-TSS (NM_009745) promoter-TSS (NM_009745) 7 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding common_peak1_89_44_0.712460071523664_5.84808313209151_1.97555764737544 chr5 149184763 149185652 + 1.97555764737544 NA intron (NM_001115151, intron 1 of 8) intron (NM_001115151, intron 1 of 8) 647 NM_001359957 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak2_53_74_-0.756271839595721_5.85068277069802_1.97555764737544-2 chr2 72979956 72980392 + 1.97555764737544 NA promoter-TSS (NM_001098425) promoter-TSS (NM_001098425) 272 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak1_60_26_0.892268567139408_5.20102178573317_1.97528391682863 chr1 177794703 177795327 + 1.97528391682863 NA intron (NM_007422, intron 1 of 12) intron (NM_007422, intron 1 of 12) 1494 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding unique_peak1_60_26_0.892268567139408_5.20102178573317_1.97528391682863 chr3 79287429 79288103 + 1.97528391682863 NA Intergenic Intergenic -57610 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding unique_peak1_60_26_0.892268567139408_5.20102178573317_1.97528391682863-2 chr3 108591331 108592517 + 1.97528391682863 NA 5' UTR (NM_001358055, exon 1 of 15) 5' UTR (NM_001358055, exon 1 of 15) 191 NM_001358055 99512 Mm.285968 NM_181400 ENSMUSG00000040389 Wdr47 1810073M12Rik|AA552998|mKIAA0893 WD repeat domain 47 protein-coding common_peak1_60_26_0.892268567139408_5.20102178573317_1.97528391682863-2 chr7 145044508 145045227 + 1.97528391682863 NA Intergenic Intergenic -104942 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak2_60_26_0.892268567139408_5.20102178573317_1.97528391682863 chr5 36722075 36722600 + 1.97528391682863 NA Intergenic Intergenic -26316 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-46 chr5 136199158 136199364 + 1.97518968347063 NA promoter-TSS (NM_025774) promoter-TSS (NM_025774) -307 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-10 chr13 45938176 45938555 + 1.97518968347063 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 26626 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-19 chr9 6617749 6618047 + 1.97518968347063 NA Intergenic Intergenic -351351 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-16 chr13 36519614 36519857 + 1.97518968347063 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 214742 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-43 chr4 133016858 133017196 + 1.97518968347063 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 5521 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-55 chr9 83806034 83806402 + 1.97518968347063 NA promoter-TSS (NM_148941) promoter-TSS (NM_148941) 87 NM_148941 83603 Mm.83949 NM_148941 ENSMUSG00000032262 Elovl4 - elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 protein-coding common_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063 chr7 128364655 128365022 + 1.97518968347063 NA Intergenic Intergenic 53334 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-21 chr15 11088008 11088343 + 1.97518968347063 NA intron (NM_175501, intron 2 of 23) intron (NM_175501, intron 2 of 23) 23402 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-16 chr6 37732603 37732809 + 1.97518968347063 NA Intergenic Intergenic -138105 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-34 chr2 51142750 51142950 + 1.97518968347063 NA intron (NM_028810, intron 2 of 4) intron (NM_028810, intron 2 of 4) 6261 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-2 chr1 195014960 195015186 + 1.97518968347063 NA Intergenic Intergenic -2326 NR_015566 320977 Mm.99905 NR_015566 ENSMUSG00000096929 A330023F24Rik C030002C11Rik RIKEN cDNA A330023F24 gene ncRNA unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-18 chr8 12777587 12777798 + 1.97518968347063 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 20676 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-15 chr12 116294816 116295009 + 1.97518968347063 NA intron (NM_028731, intron 1 of 21) intron (NM_028731, intron 1 of 21) 13690 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-25 chr17 4628186 4628383 + 1.97518968347063 NA Intergenic Intergenic -6696 NR_130984 75117 Mm.429393 NR_130984 4930517M08Rik - RIKEN cDNA 4930517M08 gene ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-31 chr19 55747655 55747956 + 1.97518968347063 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 5995 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-3 chr1 191438913 191439153 + 1.97518968347063 NA intron (NR_151615, intron 5 of 5) intron (NR_151615, intron 5 of 5) 26015 NR_151615 102634668 NR_151615 Gm32200 - predicted gene, 32200 ncRNA unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-5 chr11 92310389 92310693 + 1.97518968347063 NA Intergenic Intergenic -732986 NM_028547 73470 Mm.67677 NM_028547 ENSMUSG00000046755 Kif2b 1700063D03Rik kinesin family member 2B protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-15 chr5 105797456 105797686 + 1.97518968347063 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -78997 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-53 chr8 125918614 125918909 + 1.97518968347063 NA intron (NM_145608, intron 1 of 9) intron (NM_145608, intron 1 of 9) 8311 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-22 chr15 63340545 63340760 + 1.97518968347063 NA Intergenic Intergenic 138956 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-57 chrX 96025721 96025955 + 1.97518968347063 NA Intergenic Intergenic -68864 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-9 chr11 86894806 86895103 + 1.97518968347063 NA Intergenic Intergenic -87294 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063 chr1 92911680 92911902 + 1.97518968347063 NA intron (NM_181405, intron 1 of 10) intron (NM_181405, intron 1 of 10) 966 NM_181405 108657 Mm.200971 NM_181405 ENSMUSG00000026269 Rnpepl1 1110014H17Rik|AI894167 arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-48 chr7 101109543 101109806 + 1.97518968347063 NA intron (NM_199012, intron 1 of 20) intron (NM_199012, intron 1 of 20) 899 NM_199012 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-26 chr17 32336281 32336564 + 1.97518968347063 NA exon (NM_017476, exon 5 of 14) exon (NM_017476, exon 5 of 14) 14155 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-39 chr3 94986277 94986518 + 1.97518968347063 NA intron (NM_175356, intron 2 of 10) intron (NM_175356, intron 2 of 10) 11666 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-18 chr13 98007164 98007402 + 1.97518968347063 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 198882 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-11 chr11 116609670 116610047 + 1.97518968347063 NA intron (NM_001167680, intron 2 of 18) intron (NM_001167680, intron 2 of 18) 14394 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-38 chr3 89592497 89592728 + 1.97518968347063 NA intron (NM_080466, intron 2 of 7) intron (NM_080466, intron 2 of 7) 72448 NM_080466 140493 Mm.120250 NM_080466 ENSMUSG00000000794 Kcnn3 KCa2.3|SK3|SKCA3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-14 chr12 108942140 108942397 + 1.97518968347063 NA intron (NM_177602, intron 2 of 6) intron (NM_177602, intron 2 of 6) 47996 NM_177602 212198 Mm.342082 NM_177602 ENSMUSG00000040877 Wdr25 B930090D16Rik WD repeat domain 25 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-5 chr10 67696722 67697223 + 1.97518968347063 NA Intergenic Intergenic -125013 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-4 chr10 95544668 95544995 + 1.97518968347063 NA 3' UTR (NM_080560, exon 4 of 4) 3' UTR (NM_080560, exon 4 of 4) 14490 NR_037212 100526463 NR_037212 ENSMUSG00000092867 Mir3058 mir-3058|mmu-mir-3058 microRNA 3058 ncRNA unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-8 chr12 28377477 28377738 + 1.97518968347063 NA Intergenic Intergenic 170730 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-11 chr13 98632647 98632925 + 1.97518968347063 NA Intergenic Intergenic 4624 NM_026685 68344 Mm.28766 NM_026685 ENSMUSG00000046082 Tmem174 0610009B10Rik|AA986094 transmembrane protein 174 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-8 chr11 35922890 35923185 + 1.97518968347063 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 57052 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-37 chr3 52634391 52634781 + 1.97518968347063 NA Intergenic Intergenic -105138 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-10 chr11 94709353 94709686 + 1.97518968347063 NA Intergenic Intergenic -5020 NM_001007584 432589 Mm.342314 NM_001007584 ENSMUSG00000056008 Gm11541 - predicted gene 11541 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-51 chr8 34483277 34483673 + 1.97518968347063 NA Intergenic Intergenic 156841 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-36 chr3 27692956 27693463 + 1.97518968347063 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 17243 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-40 chr3 127063930 127064137 + 1.97518968347063 NA intron (NM_001327938, intron 4 of 47) intron (NM_001327938, intron 4 of 47) -65581 NM_178655 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-29 chr19 34879737 34879975 + 1.97518968347063 NA promoter-TSS (NM_001114339) promoter-TSS (NM_001114339) -401 NM_001114339 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-28 chr19 28516265 28516623 + 1.97518968347063 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -161780 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-7 chr12 8773714 8773979 + 1.97518968347063 NA intron (NM_011519, intron 1 of 4) intron (NM_011519, intron 1 of 4) 2450 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-17 chr13 41330670 41331016 + 1.97518968347063 NA intron (NM_001111324, intron 3 of 7) intron (NM_001111324, intron 3 of 7) 28158 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-32 chr2 13577039 13577301 + 1.97518968347063 NA intron (NM_011701, intron 2 of 8) intron (NM_011701, intron 2 of 8) 2859 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063 chr1 88133766 88133990 + 1.97518968347063 NA promoter-TSS (NM_145079) promoter-TSS (NM_145079) -931 NM_145079 94284 Mm.300095 NM_145079 ENSMUSG00000054545 Ugt1a6a UDPGT|UDPGT 1-6|UGT1-06|UGT1.6|Ugt1a6|Ugt1a7 UDP glucuronosyltransferase 1 family, polypeptide A6A protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-52 chr8 70474077 70474349 + 1.97518968347063 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 2730 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-54 chr9 75626290 75626608 + 1.97518968347063 NA intron (NM_027309, intron 1 of 2) intron (NM_027309, intron 1 of 2) 717 NM_027309 70082 Mm.19119 NM_027309 ENSMUSG00000032184 Lysmd2 2210402C18Rik|AV033872|AW538442 LysM, putative peptidoglycan-binding, domain containing 2 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-35 chr2 167273584 167273847 + 1.97518968347063 NA Intergenic Intergenic -33178 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-7 chr10 86315566 86315785 + 1.97518968347063 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 15263 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-49 chr7 143007823 143008063 + 1.97518968347063 NA intron (NM_020286, intron 2 of 7) intron (NM_020286, intron 2 of 7) 2284 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-20 chr14 67876747 67876979 + 1.97518968347063 NA intron (NM_177780, intron 2 of 51) intron (NM_177780, intron 2 of 51) -17118 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-42 chr3 159913517 159913740 + 1.97518968347063 NA intron (NM_001356350, intron 8 of 12) intron (NM_001356350, intron 8 of 12) 73978 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-45 chr5 66013821 66014078 + 1.97518968347063 NA Intergenic L1_Mus3|LINE|L1 -9664 NR_027961 231253 Mm.436542 NM_177679 ENSMUSG00000054598 9130230L23Rik - RIKEN cDNA 9130230L23 gene ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-6 chr10 83147264 83147574 + 1.97518968347063 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 161922 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-30 chr19 47248726 47249073 + 1.97518968347063 NA intron (NM_001163480, intron 3 of 5) intron (NM_001163480, intron 3 of 5) 20056 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-19 chr14 65070814 65071147 + 1.97518968347063 NA intron (NM_001360385, intron 2 of 5) intron (NM_001360385, intron 2 of 5) 27126 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-6 chr11 97050956 97051181 + 1.97518968347063 NA intron (NM_001310509, intron 1 of 22) intron (NM_001310509, intron 1 of 22) 248 NM_001081434 71240 Mm.190450 NM_001081434 ENSMUSG00000038534 Osbpl7 4933437E18Rik oxysterol binding protein-like 7 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-12 chr11 120261750 120261992 + 1.97518968347063 NA intron (NM_198423, intron 3 of 27) intron (NM_198423, intron 3 of 27) 28924 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-17 chr7 130800585 130800855 + 1.97518968347063 NA intron (NM_001081038, intron 9 of 15) intron (NM_001081038, intron 9 of 15) 26651 NM_001081038 330660 Mm.271550 NM_001081038 ENSMUSG00000040298 Btbd16 E330040A16Rik BTB (POZ) domain containing 16 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-41 chr3 144153782 144153976 + 1.97518968347063 NA Intergenic Intergenic 48453 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-12 chr15 66545486 66545706 + 1.97518968347063 NA intron (NM_172514, intron 5 of 9) intron (NM_172514, intron 5 of 9) 15450 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-9 chr13 5847804 5848054 + 1.97518968347063 NA Intergenic Intergenic 10163 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-2 chr1 149847045 149847359 + 1.97518968347063 NA intron (NM_008869, intron 15 of 17) intron (NM_008869, intron 15 of 17) 75237 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-23 chr15 99418225 99418501 + 1.97518968347063 NA Intergenic Intergenic 25144 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-14 chr4 142224311 142224678 + 1.97518968347063 NA intron (NM_001109685, intron 1 of 7) intron (NM_001109685, intron 1 of 7) -14286 NM_001109684 71529 Mm.255986 NM_144531 ENSMUSG00000040606 Kazn 2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin kazrin, periplakin interacting protein protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-33 chr2 38541916 38542223 + 1.97518968347063 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 30193 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-27 chr19 5108374 5108632 + 1.97518968347063 NA non-coding (NR_045528, exon 16 of 16) non-coding (NR_045528, exon 16 of 16) -1507 NM_029576 76308 Mm.182563 NM_029576 ENSMUSG00000024870 Rab1b 1110011F09Rik RAB1B, member RAS oncogene family protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-56 chr9 107618271 107618536 + 1.97518968347063 NA intron (NM_008138, intron 4 of 8) intron (NM_008138, intron 4 of 8) -9162 NM_001291539 20347 Mm.4083 NM_009153 ENSMUSG00000057969 Sema3b SemA|Semaa|sema5|semaV sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-44 chr4 137082157 137082373 + 1.97518968347063 NA Intergenic Intergenic -33570 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-50 chr8 31917760 31918051 + 1.97518968347063 NA exon (NM_178591, exon 1 of 9) exon (NM_178591, exon 1 of 9) 298 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-13 chr17 56462112 56462403 + 1.97518968347063 NA promoter-TSS (NM_001252456) promoter-TSS (NM_001252456) -36 NM_001252456 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-47 chr6 144270084 144270442 + 1.97518968347063 NA Intergenic Intergenic -60695 NM_001243163 20678 Mm.1752 NM_011444 ENSMUSG00000041540 Sox5 A730017D01Rik|AI528773 SRY (sex determining region Y)-box 5 protein-coding unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-24 chr16 45924052 45924421 + 1.97518968347063 NA Intergenic Intergenic -21370 NR_152226 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-13 chr12 69833356 69833691 + 1.97518968347063 NA intron (NM_201519, intron 13 of 30) intron (NM_201519, intron 13 of 30) -10163 NR_038173 70934 Mm.440427 NR_038172 4931403G20Rik - RIKEN cDNA 4931403G20 gene ncRNA unique_peak2_4_16_-2.02365593913218_3.07563487168425_1.97518968347063-3 chr10 16507319 16507607 + 1.97518968347063 NA Intergenic Intergenic 588319 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_18_4_1.65429033923103_3.14907326450288_1.97518968347063-4 chr10 5969597 5969992 + 1.97518968347063 NA Intergenic Intergenic -47394 NM_019958 56533 Mm.44606 NM_019958 ENSMUSG00000019775 Rgs17 6430507P11Rik|Rgsz2 regulator of G-protein signaling 17 protein-coding common_peak1_294_183_0.381386068873057_7.71425499049354_1.97399019333919 chr10 67536239 67539249 + 1.97399019333919 NA promoter-TSS (NM_010118) promoter-TSS (NM_010118) -125 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding common_peak1_315_198_0.36683308658514_7.82004116383622_1.96701291171512 chr15 98870690 98872258 + 1.96701291171512 NA promoter-TSS (NM_001033276) promoter-TSS (NM_001033276) -269 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak2_71_93_-0.669932582578177_6.21962256038855_1.9665468713862 chr4 126132118 126133087 + 1.9665468713862 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -15401 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_113_59_0.636053481590838_6.22491733640394_1.96654687138619 chr15 13210655 13211505 + 1.96654687138619 NA Intergenic Intergenic -37405 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_119_63_0.616422586052641_6.30821129302632_1.96650328987728 chr3 101600602 101601574 + 1.96650328987728 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 3619 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_103_125_-0.565851708191293_6.69435406940427_1.96563750269898 chr13 51974750 51975804 + 1.96563750269898 NA Intergenic Intergenic -121464 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_84_41_0.730115353738325_5.75737509964792_1.96550979555405 chr12 3310215 3310864 + 1.96550979555405 NA promoter-TSS (NM_016676) promoter-TSS (NM_016676) -570 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_84_41_0.730115353738325_5.75737509964792_1.96550979555405 chr8 105348654 105349501 + 1.96550979555405 NA 5' UTR (NM_001081332, exon 1 of 16) 5' UTR (NM_001081332, exon 1 of 16) 819 NM_001081332 277973 Mm.334766 NM_001081332 ENSMUSG00000014786 Slc9a5 Gm696 solute carrier family 9 (sodium/hydrogen exchanger), member 5 protein-coding common_peak1_85_41_0.746870127857428_5.76575248670748_1.96550979555405-2 chr6 145794022 145795621 + 1.96550979555405 NA Intergenic Intergenic -13562 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_85_41_0.746870127857428_5.76575248670748_1.96550979555405 chr3 84479236 84479807 + 1.96550979555405 NA promoter-TSS (NM_001205355) promoter-TSS (NM_001205355) -30 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-9 chr19 12501233 12501562 + 1.9654245668484 NA 5' UTR (NM_172442, exon 1 of 9) 5' UTR (NM_172442, exon 1 of 9) 599 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding unique_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484-4 chr9 13298241 13298752 + 1.9654245668484 NA Intergenic Intergenic 51540 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-11 chr4 149104073 149104614 + 1.9654245668484 NA exon (NM_010044, exon 1 of 5) exon (NM_010044, exon 1 of 5) 201 NM_001025296 13347 Mm.41433 NM_010044 ENSMUSG00000028974 Dffa A330085O09Rik|DFF35|Dff45|ICAD|ICAD-L|ICAD-S DNA fragmentation factor, alpha subunit protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-4 chr11 88488436 88488818 + 1.9654245668484 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -130624 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484 chr1 89601749 89602204 + 1.9654245668484 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 81916 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-12 chr6 85332981 85333421 + 1.9654245668484 NA intron (NM_178639, intron 1 of 13) CpG 221 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding common_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484 chr11 115419511 115419921 + 1.9654245668484 NA promoter-TSS (NM_183285) promoter-TSS (NM_183285) 203 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-2 chr10 24386890 24387562 + 1.9654245668484 NA Intergenic Intergenic 163709 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484-2 chr2 71389413 71389971 + 1.9654245668484 NA intron (NM_026115, intron 1 of 10) intron (NM_026115, intron 1 of 10) 432 NM_026115 107435 Mm.272472 NM_026115 ENSMUSG00000027018 Hat1 2410071B14Rik|AA536933|Hat-1|KAT1 histone aminotransferase 1 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-13 chr9 54699105 54699479 + 1.9654245668484 NA promoter-TSS (NM_001357875) promoter-TSS (NM_001357875) 9 NM_001357875 58233 Mm.489676 NM_021422 ENSMUSG00000032285 Dnaja4 1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4 DnaJ heat shock protein family (Hsp40) member A4 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-10 chr19 57275554 57276022 + 1.9654245668484 NA intron (NR_045319, intron 1 of 2) intron (NR_045319, intron 1 of 2) 1828 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-7 chr14 120322535 120323104 + 1.9654245668484 NA intron (NM_001360376, intron 1 of 8) intron (NM_001360376, intron 1 of 8) 16367 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-3 chr11 74575048 74575481 + 1.9654245668484 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 14894 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-8 chr15 85686436 85686783 + 1.9654245668484 NA Intergenic Intergenic -17164 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-2 chr14 102982142 102982560 + 1.9654245668484 NA TTS (NR_039592) TTS (NR_039592) 281 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484-3 chr7 63816319 63816839 + 1.9654245668484 NA Intergenic Intergenic -100278 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-5 chr12 33185193 33185627 + 1.9654245668484 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 37724 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484-3 chr5 64880126 64880605 + 1.9654245668484 NA Intergenic Intergenic 52334 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding unique_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484 chr12 83982055 83982437 + 1.9654245668484 NA Intergenic Intergenic -5615 NM_134188 171210 Mm.371675 NM_134188 ENSMUSG00000021226 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 protein-coding unique_peak1_33_11_1.2248683566153_4.1973966790288_1.9654245668484-6 chr14 76762610 76763042 + 1.9654245668484 NA TTS (NR_153763) TTS (NR_153763) 2695 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484-4 chrX 37126903 37127264 + 1.9654245668484 NA exon (NM_025937, exon 1 of 9) exon (NM_025937, exon 1 of 9) 320 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding common_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484 chr17 24528308 24528601 + 1.9654245668484 NA promoter-TSS (NM_001172114) promoter-TSS (NM_001172114) 203 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA common_peak2_12_28_-1.42538784109921_4.14528707457796_1.9654245668484-2 chr6 91573724 91573984 + 1.9654245668484 NA Intergenic Intergenic 57819 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_127_149_-0.519943584997817_6.96884689799697_1.96451526862327 chr16 56028904 56030212 + 1.96451526862327 NA intron (NM_001356449, intron 1 of 5) CpG 159 NM_001356449 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak2_128_149_-0.508795537632238_6.97442092167976_1.96451526862327 chr7 110018312 110019214 + 1.96451526862327 NA intron (NM_181517, intron 1 of 24) CpG 512 NM_001362172 233726 Mm.222328 NM_181517 ENSMUSG00000066232 Ipo7 A330055O14Rik|C330016G14|Imp7|Ranbp7 importin 7 protein-coding common_peak1_139_76_0.570459492704415_6.55201628704711_1.96253105648089 chr19 60226098 60226678 + 1.96253105648089 NA non-coding (NR_152390, exon 1 of 4) non-coding (NR_152390, exon 1 of 4) 313 NR_152391 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak1_65_29_0.853120409215996_5.33345080021652_1.96184293807029 chr3 40846019 40846621 + 1.96184293807029 NA promoter-TSS (NR_038067) promoter-TSS (NR_038067) 534 NM_028140 72175 Mm.130610 NM_028140 ENSMUSG00000025759 Mfsd8 2810423E13Rik|AI836898|AV142426|Cln7 major facilitator superfamily domain containing 8 protein-coding common_peak1_167_95_0.513462236151736_6.84169361879702_1.96123669788719 chr8 45018061 45019118 + 1.96123669788719 NA intron (NM_001081286, intron 8 of 25) intron (NM_001081286, intron 8 of 25) 46829 NR_033588 434310 Mm.334512 NR_033588 ENSMUSG00000066158 AY512931 - cDNA sequence AY512931 ncRNA common_peak1_115_137_-0.540666414974147_6.8381912492911_1.96123669788717 chr13 60175982 60177546 + 1.96123669788717 NA exon (NM_008086, exon 1 of 1) exon (NM_008086, exon 1 of 1) 771 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding common_peak2_57_79_-0.747015073510096_5.94842055813231_1.96088648955617 chr11 35769578 35770822 + 1.96088648955617 NA intron (NM_145962, intron 1 of 6) intron (NM_145962, intron 1 of 6) 705 NM_145962 211347 Mm.255044 NM_145962 ENSMUSG00000018846 Pank3 - pantothenate kinase 3 protein-coding common_peak1_95_48_0.682055843183554_5.95573776570698_1.96088648955617 chr15 51799127 51800056 + 1.96088648955617 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 65870 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_57_79_-0.747015073510096_5.94842055813231_1.96088648955617-2 chr13 60049436 60050705 + 1.96088648955617 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 20359 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746-2 chr17 25222582 25223162 + 1.9602491241746 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 290 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding unique_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746-3 chr8 36592455 36593125 + 1.9602491241746 NA intron (NM_001194940, intron 7 of 17) intron (NM_001194940, intron 7 of 17) 21153 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_47_19_0.981892571984643_4.81287438087968_1.9602491241746-2 chr3 129969614 129970085 + 1.9602491241746 NA intron (NM_025779, intron 1 of 7) CpG 357 NM_025779 66815 Mm.31056 NM_025779 ENSMUSG00000027994 Mcub 9030408N13Rik|Ccdc109b mitochondrial calcium uniporter dominant negative beta subunit protein-coding unique_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746 chr1 88876271 88876946 + 1.9602491241746 NA Intergenic Intergenic 121718 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA unique_peak1_47_19_0.981892571984643_4.81287438087968_1.9602491241746-2 chr17 27133351 27133868 + 1.9602491241746 NA intron (NM_026063, intron 1 of 3) CpG 282 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak1_22_40_-1.10764372324858_4.80373014299379_1.9602491241746 chr18 38249807 38250087 + 1.9602491241746 NA promoter-TSS (NM_024179) promoter-TSS (NM_024179) 251 NR_015475 73516 Mm.48776 NR_015475 ENSMUSG00000097080 1700086O06Rik - RIKEN cDNA 1700086O06 gene ncRNA unique_peak1_47_19_0.981892571984643_4.81287438087968_1.9602491241746 chr11 8569913 8570391 + 1.9602491241746 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 94383 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_47_19_0.981892571984643_4.81287438087968_1.9602491241746 chr19 3769075 3769491 + 1.9602491241746 NA intron (NM_001167889, intron 2 of 10) intron (NM_001167889, intron 2 of 10) 1862 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding unique_peak1_48_19_1.01143004847869_4.82764311912671_1.9602491241746 chr15 66885980 66886622 + 1.9602491241746 NA Intergenic Intergenic -5092 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak1_48_19_1.01143004847869_4.82764311912671_1.9602491241746-2 chr6 116405980 116406666 + 1.9602491241746 NA exon (NM_001302383, exon 8 of 8) exon (NM_001302383, exon 8 of 8) 54855 NM_009662 11689 Mm.41072 NM_009662 ENSMUSG00000025701 Alox5 5-LO|5-LOX|5LO|5LX|AI850497|F730011J02 arachidonate 5-lipoxygenase protein-coding unique_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746-2 chr17 84071066 84071419 + 1.9602491241746 NA Intergenic Intergenic -7418 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746-4 chr9 34985760 34986248 + 1.9602491241746 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -130724 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746 chr12 8313449 8314021 + 1.9602491241746 NA intron (NM_021429, intron 1 of 6) intron (NM_021429, intron 1 of 6) 302 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_22_40_-1.10764372324858_4.80373014299379_1.9602491241746-3 chr7 126861333 126861850 + 1.9602491241746 NA promoter-TSS (NM_172746) promoter-TSS (NM_172746) -128 NM_153580 233875 Mm.486253 NM_153580 ENSMUSG00000030689 Ino80e AI225782|AI854876|Ccdc85|Ccdc95 INO80 complex subunit E protein-coding common_peak2_311_319_-0.336719256924525_8.1535684664251_1.95837879857417 chr6 34598522 34601362 + 1.95837879857417 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 1438 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_79_38_0.750184764962937_5.66049460134372_1.95835867484699 chr5 72863679 72864715 + 1.95835867484699 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 4251 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_80_38_0.767980234265365_5.66939233599493_1.95835867484699 chr11 70239544 70240508 + 1.95835867484699 NA promoter-TSS (NM_173742) promoter-TSS (NM_173742) -174 NM_173742 52898 Mm.29852 NM_173742 ENSMUSG00000093989 Rnasek 2310033H11Rik|AA571397|D11Bwg0434e ribonuclease, RNase K protein-coding common_peak2_191_111_0.482355785667914_7.04853281489156_1.95582004222037 chr19 4229054 4230554 + 1.95582004222037 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) -2089 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak1_135_156_-0.498899850701664_7.0451708235408_1.95582004222037 chr8 85071724 85072478 + 1.95582004222037 NA intron (NM_001039514, intron 1 of 8) CpG 344 NM_001039514 330817 Mm.193086 NM_201408 ENSMUSG00000060038 Dhps Dhs deoxyhypusine synthase protein-coding common_peak1_70_32_0.820226622348278_5.45450743053259_1.95552668877042 chr3 94838097 94838705 + 1.95552668877042 NA intron (NM_001165948, intron 1 of 18) intron (NM_001165948, intron 1 of 18) 834 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak1_70_32_0.820226622348278_5.45450743053259_1.95552668877042-2 chr9 121297654 121298803 + 1.95552668877042 NA intron (NR_152160, intron 1 of 17) intron (NR_152160, intron 1 of 17) 726 NR_152160 67095 Mm.491112 NM_175114 ENSMUSG00000032536 Trak1 2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042 trafficking protein, kinesin binding 1 protein-coding common_peak1_70_32_0.820226622348278_5.45450743053259_1.95552668877042-3 chrX 142896995 142897789 + 1.95552668877042 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 69336 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_38_58_-0.876269272679273_5.44450841302221_1.95552668877042 chr1 64933341 64934212 + 1.95552668877042 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 23048 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_38_58_-0.876269272679273_5.44450841302221_1.95552668877042 chr15 36373976 36374390 + 1.95552668877042 NA Intergenic Intergenic -91036 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_268_165_0.397738891626426_7.57390887716014_1.95547011878138 chr15 77148996 77151696 + 1.95547011878138 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 3466 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-8 chr12 3782216 3782429 + 1.95509489018123 NA non-coding (NR_149729, exon 19 of 19) non-coding (NR_149729, exon 19 of 19) -24658 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-12 chr15 74669568 74669925 + 1.95509489018123 NA 3' UTR (NM_001276684, exon 3 of 3) 3' UTR (NM_001276684, exon 3 of 3) 2824 NM_001276684 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-11 chr10 79802800 79803043 + 1.95509489018123 NA intron (NM_023128, intron 1 of 8) intron (NM_023128, intron 1 of 8) 9349 NM_001161747 18483 Mm.34650 NM_023128 ENSMUSG00000035863 Palm - paralemmin protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-82 chr9 60837001 60837243 + 1.95509489018123 NA intron (NM_001357408, intron 1 of 19) intron (NM_001357408, intron 1 of 19) 42680 NM_001357407 72565 Mm.68819 NM_028283 ENSMUSG00000034485 Uaca 2700059D02Rik|nucling uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-44 chr19 38001106 38001407 + 1.95509489018123 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 42321 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-3 chr19 28328231 28328435 + 1.95509489018123 NA intron (NM_175459, intron 6 of 10) intron (NM_175459, intron 6 of 10) -317167 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-6 chr1 93634246 93634439 + 1.95509489018123 NA intron (NM_021537, intron 2 of 11) intron (NM_021537, intron 2 of 11) 1385 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-22 chr4 84066044 84066342 + 1.95509489018123 NA Intergenic Intergenic -21314 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-59 chr4 150556597 150556915 + 1.95509489018123 NA intron (NM_001085492, intron 11 of 22) intron (NM_001085492, intron 11 of 22) 95418 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-7 chr11 102997038 102997280 + 1.95509489018123 NA intron (NM_026551, intron 4 of 4) intron (NM_026551, intron 4 of 4) 2762 NR_105896 102466988 NR_105896 ENSMUSG00000098613 Mir6931 Gm27303|mmu-mir-6931 microRNA 6931 ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-51 chr2 160264263 160264463 + 1.95509489018123 NA Intergenic Intergenic 63131 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-35 chr17 71947829 71948199 + 1.95509489018123 NA intron (NM_007439, intron 11 of 28) intron (NM_007439, intron 11 of 28) 166067 NM_030179 78785 Mm.196382 NM_030179 ENSMUSG00000024059 Clip4 1700024K14Rik|1700074B05Rik|4833417L20Rik|5830409B12Rik|Rsnl2 CAP-GLY domain containing linker protein family, member 4 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-61 chr5 34574566 34574833 + 1.95509489018123 NA TTS (NR_106111) TTS (NR_106111) 548 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-29 chr16 10781690 10781990 + 1.95509489018123 NA Intergenic B1_Mur4|SINE|Alu 3696 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-72 chr7 130937511 130937869 + 1.95509489018123 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 1487 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-2 chr1 77846792 77847111 + 1.95509489018123 NA Intergenic Intergenic -331863 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-15 chr11 44726302 44726520 + 1.95509489018123 NA intron (NM_001290709, intron 6 of 15) intron (NM_001290709, intron 6 of 15) 108311 NM_001290710 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-71 chr7 112456006 112456227 + 1.95509489018123 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 28410 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-4 chr3 21954357 21954592 + 1.95509489018123 NA Intergenic RSINE1|SINE|B4 -122178 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-16 chr17 26535998 26536440 + 1.95509489018123 NA Intergenic Intergenic -25293 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-53 chr3 107863007 107863202 + 1.95509489018123 NA Intergenic Intergenic -14126 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-12 chr10 83177887 83178155 + 1.95509489018123 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 159796 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-27 chr5 143525041 143525272 + 1.95509489018123 NA intron (NM_001347530, intron 1 of 6) intron (NM_001347530, intron 1 of 6) 2837 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-36 chr17 84068196 84068437 + 1.95509489018123 NA Intergenic Intergenic -10344 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-17 chr17 45064965 45065268 + 1.95509489018123 NA intron (NM_178652, intron 11 of 11) intron (NM_178652, intron 11 of 11) -184231 NM_029257 75341 Mm.386821 NM_029257 4930564C03Rik - RIKEN cDNA 4930564C03 gene protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-30 chr16 18836689 18836910 + 1.95509489018123 NA exon (NM_001033164, exon 2 of 3) exon (NM_001033164, exon 2 of 3) 219 NM_001033164 72307 Mm.36907 NM_001033164 ENSMUSG00000071632 2510002D24Rik 2410043I01Rik|AA163535|AA409624|DXMgi27 RIKEN cDNA 2510002D24 gene protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-63 chr5 91723080 91723329 + 1.95509489018123 NA Intergenic Intergenic 44096 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-64 chr5 96795909 96796119 + 1.95509489018123 NA intron (NM_013470, intron 1 of 12) intron (NM_013470, intron 1 of 12) 2629 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-25 chr13 72639495 72639860 + 1.95509489018123 NA Intergenic Intergenic 10880 NM_010574 16372 Mm.28888 NM_010574 ENSMUSG00000001504 Irx2 - Iroquois homeobox 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-50 chr2 131511869 131512241 + 1.95509489018123 NA exon (NM_001177836, exon 2 of 8) exon (NM_001177836, exon 2 of 8) 20193 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-75 chr8 34803878 34804133 + 1.95509489018123 NA Intergenic Intergenic -3605 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-42 chr19 25406331 25406538 + 1.95509489018123 NA intron (NM_181404, intron 4 of 13) intron (NM_181404, intron 4 of 13) -99272 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-80 chr9 44606871 44607220 + 1.95509489018123 NA intron (NM_001357703, intron 1 of 13) intron (NM_001357703, intron 1 of 13) 2153 NM_181324 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-24 chr4 134761215 134761448 + 1.95509489018123 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 6673 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-52 chr3 21934700 21934890 + 1.95509489018123 NA Intergenic Intergenic -141857 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-77 chr8 126878408 126878638 + 1.95509489018123 NA Intergenic Intergenic 29503 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-19 chr19 40479651 40480046 + 1.95509489018123 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -28450 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-84 chr9 108522096 108522445 + 1.95509489018123 NA intron (NM_001114119, intron 2 of 10) intron (NM_001114119, intron 2 of 10) 5183 NM_175143 69232 Mm.335449 NM_175143 ENSMUSG00000006673 Qrich1 2610028H07Rik|b2b2404Clo glutamine-rich 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-78 chr9 32791869 32792074 + 1.95509489018123 NA Intergenic Intergenic 95929 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-74 chr8 11278063 11278337 + 1.95509489018123 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -34605 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-14 chr17 12294117 12294341 + 1.95509489018123 NA intron (NM_001357722, intron 1 of 25) intron (NM_001357722, intron 1 of 25) 24431 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-33 chr16 86817024 86817218 + 1.95509489018123 NA Intergenic Intergenic -10608 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-47 chr2 33356245 33356604 + 1.95509489018123 NA intron (NM_001290570, intron 1 of 16) intron (NM_001290570, intron 1 of 16) 15070 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-9 chr13 31473680 31474020 + 1.95509489018123 NA Intergenic Intergenic -84320 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-56 chr3 144667931 144668222 + 1.95509489018123 NA Intergenic Intergenic 52259 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-17 chr11 103220373 103220638 + 1.95509489018123 NA 3' UTR (NM_016896, exon 16 of 16) 3' UTR (NM_016896, exon 16 of 16) -2073 NM_177801 328019 Mm.189646 NM_177801 ENSMUSG00000044787 Spata32 4933400C05Rik|VAD1.2 spermatogenesis associated 32 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-83 chr9 75436250 75436529 + 1.95509489018123 NA Intergenic Intergenic -5135 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-29 chr7 127194148 127194458 + 1.95509489018123 NA exon (NM_027353, exon 5 of 7) exon (NM_027353, exon 5 of 7) 1774 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-2 chr1 79469223 79469442 + 1.95509489018123 NA Intergenic Intergenic -29242 NM_001310680 20254 Mm.5038 NM_009129 ENSMUSG00000050711 Scg2 Chgc|SgII secretogranin II protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-76 chr8 119778723 119778935 + 1.95509489018123 NA promoter-TSS (NM_028883) promoter-TSS (NM_028883) -413 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-55 chr3 122375398 122375614 + 1.95509489018123 NA Intergenic Intergenic -44251 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-4 chr1 181228554 181228806 + 1.95509489018123 NA Intergenic Intergenic -16702 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-11 chr13 91461174 91461417 + 1.95509489018123 NA intron (NM_001360776, intron 1 of 15) CpG 198 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-34 chr17 25112161 25112370 + 1.95509489018123 NA intron (NM_027880, intron 3 of 20) intron (NM_027880, intron 3 of 20) 3640 NM_027880 71718 Mm.288702 NM_027880 ENSMUSG00000024170 Telo2 1200003M09Rik|AI415602|Tel2|mKIAA0683 telomere maintenance 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-23 chr12 108222949 108223229 + 1.95509489018123 NA intron (NM_001159910, intron 1 of 5) intron (NM_001159910, intron 1 of 5) 43351 NM_009832 12454 Mm.474441 NM_009832 ENSMUSG00000021258 Ccnk AW123198|AW413594|CPR4|CycK cyclin K protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123 chr1 64939974 64940225 + 1.95509489018123 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 16725 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-69 chr7 100537235 100537423 + 1.95509489018123 NA intron (NM_183270, intron 1 of 1) intron (NM_183270, intron 1 of 1) 229 NM_183270 68185 Mm.228995 NM_183270 ENSMUSG00000044881 Coa4 5330414O08Rik|AI115477|AW047259|Chchd8|E2ig2 cytochrome c oxidase assembly factor 4 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-32 chrX 51514523 51514797 + 1.95509489018123 NA intron (NM_001077202, intron 2 of 4) intron (NM_001077202, intron 2 of 4) 165817 NM_001290468 50786 Mm.252561 NM_015819 ENSMUSG00000062184 Hs6st2 6OST2 heparan sulfate 6-O-sulfotransferase 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-46 chr19 56038556 56038754 + 1.95509489018123 NA Intergenic Intergenic 143334 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-67 chr6 112887586 112887967 + 1.95509489018123 NA intron (NM_080448, intron 1 of 21) B1_Mur3|SINE|Alu 59490 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-18 chr11 121701918 121702111 + 1.95509489018123 NA promoter-TSS (NM_144797) promoter-TSS (NM_144797) -413 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-39 chr18 61212919 61213167 + 1.95509489018123 NA Intergenic Intergenic -1447 NM_007885 13521 Mm.24803 NM_007885 ENSMUSG00000034320 Slc26a2 Dtd|ST-OB solute carrier family 26 (sulfate transporter), member 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-9 chr1 161033954 161034169 + 1.95509489018123 NA promoter-TSS (NR_153814) promoter-TSS (NR_153814) 788 NM_001356489 240869 Mm.296127 NM_173424 ENSMUSG00000043467 Zbtb37 D430004I08Rik zinc finger and BTB domain containing 37 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-31 chr7 142430777 142431072 + 1.95509489018123 NA Intergenic Intergenic -3926 NR_153437 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-26 chr5 105685530 105685754 + 1.95509489018123 NA Intergenic Intergenic -14327 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-79 chr9 44517076 44517297 + 1.95509489018123 NA intron (NM_007551, intron 1 of 1) intron (NM_007551, intron 1 of 1) 9235 NM_007551 12145 Mm.6246 NM_007551 ENSMUSG00000047880 Cxcr5 Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15 chemokine (C-X-C motif) receptor 5 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-21 chr3 122340961 122341192 + 1.95509489018123 NA Intergenic Intergenic -47373 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-54 chr3 116953443 116953657 + 1.95509489018123 NA intron (NM_023245, intron 1 of 7) intron (NM_023245, intron 1 of 7) -14717 NR_040596 74654 Mm.410820 NR_040596 ENSMUSG00000080907 4930455H04Rik - RIKEN cDNA 4930455H04 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-22 chr12 102705183 102705393 + 1.95509489018123 NA promoter-TSS (NM_172584) promoter-TSS (NM_172584) -419 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-40 chr18 62530142 62530397 + 1.95509489018123 NA intron (NM_134136, intron 6 of 21) intron (NM_134136, intron 6 of 21) 13583 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-68 chr7 16420670 16420914 + 1.95509489018123 NA intron (NM_198631, intron 4 of 13) intron (NM_198631, intron 4 of 13) 19596 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-26 chr13 110910967 110911317 + 1.95509489018123 NA Intergenic Intergenic -7296 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-49 chr2 109732843 109733182 + 1.95509489018123 NA Intergenic Intergenic 10091 NM_001285422 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-3 chr1 87173709 87173925 + 1.95509489018123 NA Intergenic G-rich|Low_complexity|Low_complexity -9497 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-28 chr15 79098150 79098489 + 1.95509489018123 NA Intergenic Intergenic -10664 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-45 chr19 53423922 53424234 + 1.95509489018123 NA Intergenic Charlie4z|DNA|hAT-Charlie -33444 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-13 chr16 24814795 24815133 + 1.95509489018123 NA intron (NM_178665, intron 8 of 12) intron (NM_178665, intron 8 of 12) 93109 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123 chr15 64478182 64478577 + 1.95509489018123 NA Intergenic B4A|SINE|B4 -95460 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-58 chr4 81670596 81670902 + 1.95509489018123 NA Intergenic Intergenic -183736 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-30 chr7 130494417 130494645 + 1.95509489018123 NA intron (NM_013799, intron 7 of 11) intron (NM_013799, intron 7 of 11) 25049 NM_001136054 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-21 chr12 79561308 79561560 + 1.95509489018123 NA intron (NM_009014, intron 7 of 10) (TTTC)n|Simple_repeat|Simple_repeat 264083 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-19 chr12 33166985 33167349 + 1.95509489018123 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 19481 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-81 chr9 53264079 53264292 + 1.95509489018123 NA Intergenic Intergenic -16073 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-23 chr4 95482477 95482735 + 1.95509489018123 NA Intergenic Intergenic -74901 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-7 chr1 150146927 150147186 + 1.95509489018123 NA Intergenic Intergenic 17892 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-6 chr11 70573014 70573247 + 1.95509489018123 NA intron (NM_016713, intron 1 of 30) intron (NM_016713, intron 1 of 30) 10249 NM_016713 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-3 chr1 170741129 170741347 + 1.95509489018123 NA intron (NM_001081304, intron 15 of 15) intron (NM_001081304, intron 15 of 15) 96706 NM_177068 320078 Mm.287131 NM_177068 ENSMUSG00000038463 Olfml2b 1110018N05Rik|4832415H08Rik|AI467542 olfactomedin-like 2B protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-70 chr7 110794129 110794423 + 1.95509489018123 NA intron (NM_009667, intron 5 of 14) intron (NM_009667, intron 5 of 14) 21672 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-18 chr17 88528124 88528383 + 1.95509489018123 NA Intergenic Intergenic -1871 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-41 chr18 82509730 82510006 + 1.95509489018123 NA intron (NM_001025245, intron 2 of 3) intron (NM_001025245, intron 2 of 3) 34745 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-32 chr16 57687044 57687289 + 1.95509489018123 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 67571 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-5 chrX 7722604 7722816 + 1.95509489018123 NA promoter-TSS (NM_001290794) promoter-TSS (NM_001290794) -217 NM_001290794 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-85 chrX 52912997 52913287 + 1.95509489018123 NA intron (NM_001290546, intron 1 of 8) intron (NM_001290546, intron 1 of 8) 928 NM_001290546 70998 Mm.26870 NM_027642 ENSMUSG00000025626 Phf6 2700007B13Rik|4931428F02Rik|mKIAA1823 PHD finger protein 6 protein-coding common_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123 chr13 6647431 6647694 + 1.95509489018123 NA intron (NM_019703, intron 1 of 21) intron (NM_019703, intron 1 of 21) 1209 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-28 chr6 91195615 91195843 + 1.95509489018123 NA Intergenic Intergenic -17035 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-20 chr12 52493912 52494147 + 1.95509489018123 NA Intergenic Intergenic -13420 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-48 chr2 38538351 38538694 + 1.95509489018123 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 26646 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-27 chr15 73730212 73730411 + 1.95509489018123 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) 5381 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-57 chr4 56828941 56829165 + 1.95509489018123 NA intron (NM_018761, intron 9 of 18) intron (NM_018761, intron 9 of 18) -26722 NM_026079 230233 Mm.282743 NM_026079 ENSMUSG00000028431 Ikbkap 3110040G09Rik|6030413P05|C78473|Elp1|IKAP inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-16 chr11 51061367 51061618 + 1.95509489018123 NA exon (NM_001347495, exon 4 of 5) exon (NM_001347495, exon 4 of 5) 2235 NM_001347495 21408 Mm.4792 NM_009329 ENSMUSG00000020364 Zfp354a AW488485|Tcf17|Znf354a|kid1 zinc finger protein 354A protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-10 chr13 37879379 37879657 + 1.95509489018123 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) -8916 NR_033218 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-37 chr18 5162178 5162455 + 1.95509489018123 NA TTS (NR_153824) TTS (NR_153824) 3415 NR_153824 102637682 Mm.451914 NR_153824 Gm26682 Gm38715 predicted gene, 26682 ncRNA unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-5 chr10 17004198 17004482 + 1.95509489018123 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 91442 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-31 chr16 29735695 29736018 + 1.95509489018123 NA Intergenic Intergenic 156522 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-62 chr5 66045852 66046054 + 1.95509489018123 NA intron (NM_139065, intron 3 of 6) intron (NM_139065, intron 3 of 6) -41668 NR_027961 231253 Mm.436542 NM_177679 ENSMUSG00000054598 9130230L23Rik - RIKEN cDNA 9130230L23 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-13 chr10 96630214 96630441 + 1.95509489018123 NA Intergenic Intergenic 13326 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-4 chr1 88959269 88959601 + 1.95509489018123 NA Intergenic Intergenic -56678 NR_040471 73475 Mm.491040 NR_040471 ENSMUSG00000099378 1700067G17Rik - RIKEN cDNA 1700067G17 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123 chr1 36020490 36020934 + 1.95509489018123 NA Intergenic B1_Mm|SINE|Alu -47688 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-24 chr13 52892849 52893085 + 1.95509489018123 NA intron (NM_016709, intron 4 of 9) intron (NM_016709, intron 4 of 9) 36710 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-66 chr6 99449988 99450509 + 1.95509489018123 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -14903 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_16_5_1.23192333618854_3.20092416881543_1.95509489018123 chr3 98420936 98421175 + 1.95509489018123 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 35976 NM_001111336 15495 Mm.14309 NM_008294 ENSMUSG00000095143 Hsd3b4 - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-8 chr1 155234576 155234822 + 1.95509489018123 NA Intergenic Intergenic 75996 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-43 chr19 28991605 28991804 + 1.95509489018123 NA intron (NM_001302380, intron 1 of 6) intron (NM_001302380, intron 1 of 6) 1352 NM_025950 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-25 chr5 92373003 92373355 + 1.95509489018123 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -9883 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-10 chr1 168134650 168134919 + 1.95509489018123 NA intron (NM_008783, intron 7 of 7) intron (NM_008783, intron 7 of 7) 297385 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-38 chr18 60977417 60977609 + 1.95509489018123 NA intron (NM_177407, intron 14 of 17) intron (NM_177407, intron 14 of 17) 13959 NM_001286809 12322 Mm.131530 NM_009792 ENSMUSG00000024617 Camk2a CaMKII|R74975|mKIAA0968 calcium/calmodulin-dependent protein kinase II alpha protein-coding common_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-2 chr15 76010210 76010529 + 1.95509489018123 NA promoter-TSS (NM_001168253) promoter-TSS (NM_001168253) -871 NM_001168253 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-65 chr6 17503369 17503635 + 1.95509489018123 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 39545 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-73 chr7 139704145 139704459 + 1.95509489018123 NA Intergenic Intergenic -20487 NM_001302546 212124 Mm.425507 NM_177212 ENSMUSG00000049571 Cfap46 9330101J02Rik|E030019B06Rik|Gm170|Ttc40 cilia and flagella associated protein 46 protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-60 chr5 21496829 21497117 + 1.95509489018123 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -46554 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-20 chr2 27313045 27313306 + 1.95509489018123 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -65872 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-5 chr1 89730585 89730821 + 1.95509489018123 NA intron (NM_001037136, intron 10 of 16) intron (NM_001037136, intron 10 of 16) -46811 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_16_5_1.23192333618854_3.20092416881543_1.95509489018123-14 chr10 125971015 125971266 + 1.95509489018123 NA intron (NM_177152, intron 1 of 18) intron (NM_177152, intron 1 of 18) 4921 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding unique_peak2_5_14_-1.58190499001678_3.11593810060013_1.95509489018123-15 chr17 12959786 12960107 + 1.95509489018123 NA intron (NM_009338, intron 2 of 8) intron (NM_009338, intron 2 of 8) 779 NM_009338 110460 Mm.439711 NM_009338 ENSMUSG00000023832 Acat2 AW742799|Tcp-1x|Tcp1-rs1 acetyl-Coenzyme A acetyltransferase 2 protein-coding common_peak2_133_72_0.584673479187126_6.48216129847358_1.95506517810144 chr7 68022151 68022997 + 1.95506517810144 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 70317 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_87_109_-0.609239290500844_6.47674006827424_1.95506517810141 chr4 45342146 45343247 + 1.95506517810141 NA exon (NM_153167, exon 1 of 7) exon (NM_153167, exon 1 of 7) 595 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding common_peak1_87_109_-0.609239290500844_6.47674006827424_1.95506517810141 chr9 44406940 44408258 + 1.95506517810141 NA promoter-TSS (NM_024266) promoter-TSS (NM_024266) -51 NM_021789 60409 Mm.29814 NM_021789 ENSMUSG00000032112 Trappc4 1500017G03Rik|AI303617|HSPC172|PTD009|Sbd|Sbdn|Sdcbp2|TRS23 trafficking protein particle complex 4 protein-coding common_peak1_42_62_-0.831037393290485_5.56176122685467_1.95474765239579 chr1 182090487 182091126 + 1.95474765239579 NA Intergenic Intergenic -33931 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak1_41_62_-0.864745227480537_5.54490730975965_1.95474765239579 chr14 8098356 8099191 + 1.95474765239579 NA intron (NM_001360314, intron 1 of 19) intron (NM_001360314, intron 1 of 19) 562 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding common_peak2_75_35_0.79218347352959_5.56601673820711_1.95474765239578 chr3 105055337 105055666 + 1.95474765239578 NA Intergenic Intergenic -2355 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_75_35_0.79218347352959_5.56601673820711_1.95474765239578-2 chr14 57317556 57318251 + 1.95474765239578 NA intron (NM_030004, intron 3 of 7) intron (NM_030004, intron 3 of 7) 80580 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak1_74_35_0.773209462937451_5.55652973291104_1.95474765239578 chr10 80938049 80939041 + 1.95474765239578 NA Intergenic Intergenic 8454 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak1_75_35_0.79218347352959_5.56601673820711_1.95474765239578 chr10 34018628 34019429 + 1.95474765239578 NA intron (NM_025614, intron 1 of 6) intron (NM_025614, intron 1 of 6) 588 NM_025614 66521 Mm.28528 NM_025614 ENSMUSG00000019782 Rwdd1 0710001K08Rik|2610002D06Rik|2700069A07Rik|IH1 RWD domain containing 1 protein-coding common_peak1_75_35_0.79218347352959_5.56601673820711_1.95474765239578-3 chr8 78677644 78678486 + 1.95474765239578 NA intron (NM_001009981, intron 6 of 10) intron (NM_001009981, intron 6 of 10) 143087 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_74_35_0.773209462937451_5.55652973291104_1.95474765239578-2 chr14 57752876 57753732 + 1.95474765239578 NA Intergenic Intergenic -7181 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_98_120_-0.578016630222626_6.62985492216328_1.95468763749158 chr1 82839368 82840651 + 1.95468763749158 NA intron (NM_001310713, intron 1 of 11) CpG 549 NM_001347077 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_98_120_-0.578016630222626_6.62985492216328_1.95468763749158 chr15 102013875 102014681 + 1.95468763749158 NA Intergenic Intergenic -9936 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak2_98_120_-0.578016630222626_6.62985492216328_1.95468763749158-2 chr10 77200722 77202585 + 1.95468763749158 NA Intergenic Intergenic -35123 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-18 chr11 80495308 80495535 + 1.95434855131066 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 13685 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-75 chr6 91745804 91746071 + 1.95434855131066 NA intron (NM_009320, intron 10 of 14) intron (NM_009320, intron 10 of 14) 61456 NM_001159507 243547 Mm.333264 NM_001033353 ENSMUSG00000030098 Grip2 - glutamate receptor interacting protein 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-70 chr5 125116494 125116728 + 1.95434855131066 NA intron (NM_011424, intron 4 of 46) intron (NM_011424, intron 4 of 46) 62603 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-96 chrX 106187190 106187378 + 1.95434855131066 NA exon (NM_008828, exon 1 of 11) exon (NM_008828, exon 1 of 11) 184 NM_008828 18655 Mm.316355 NM_008828 ENSMUSG00000062070 Pgk1 Pgk-1 phosphoglycerate kinase 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-8 chr17 26466148 26466351 + 1.95434855131066 NA Intergenic Intergenic 42223 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-23 chr8 65067910 65068138 + 1.95434855131066 NA Intergenic Intergenic -30688 NM_001297554 100038489 Mm.58847 NM_001297554 ENSMUSG00000079042 Apela Ela|Elabela|Ende|Gm10664 apelin receptor early endogenous ligand protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-16 chr4 84634480 84634747 + 1.95434855131066 NA intron (NM_172870, intron 1 of 5) intron (NM_172870, intron 1 of 5) 40473 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-17 chr4 103422260 103422478 + 1.95434855131066 NA intron (NR_040673, intron 3 of 3) intron (NR_040673, intron 3 of 3) 39869 NR_040673 622167 Mm.244115 NR_040673 ENSMUSG00000086136 Gm12718 - predicted gene 12718 ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-13 chr10 78339589 78339884 + 1.95434855131066 NA TTS (NR_106119) TTS (NR_106119) 471 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-3 chr10 83158839 83159120 + 1.95434855131066 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 173482 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-93 chr9 44772461 44772731 + 1.95434855131066 NA promoter-TSS (NM_023831) promoter-TSS (NM_023831) -413 NM_023831 76568 Mm.278597 NM_023831 ENSMUSG00000002031 Ift46 1500035H01Rik|AA408110|AI663846|R75047|c11orf2 intraflagellar transport 46 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-14 chr2 155405613 155405887 + 1.95434855131066 NA exon (NM_019825, exon 10 of 14) exon (NM_019825, exon 10 of 14) 23894 NM_178111 68728 Mm.293605 NM_178111 ENSMUSG00000038375 Trp53inp2 1110029F20Rik|Tp53inp2 transformation related protein 53 inducible nuclear protein 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-88 chr8 27071694 27072019 + 1.95434855131066 NA Intergenic ID4_|SINE|ID -13985 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-44 chr17 70709830 70710057 + 1.95434855131066 NA intron (NM_001360665, intron 9 of 14) L2a|LINE|L2 136834 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-24 chr8 11273037 11273262 + 1.95434855131066 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -39656 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-40 chr16 50303041 50303328 + 1.95434855131066 NA intron (NM_027444, intron 3 of 16) intron (NM_027444, intron 3 of 16) 129205 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-29 chr13 45455342 45455545 + 1.95434855131066 NA Intergenic Intergenic -52001 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-20 chr11 96936873 96937090 + 1.95434855131066 NA TTS (NM_134021) TTS (NM_134021) 7038 NM_134021 103711 Mm.254704 NM_134021 ENSMUSG00000018659 Pnpo AI415282 pyridoxine 5'-phosphate oxidase protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-62 chr3 116424692 116424964 + 1.95434855131066 NA promoter-TSS (NM_001080818) promoter-TSS (NM_001080818) -796 NM_001173553 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-42 chr17 35705706 35705912 + 1.95434855131066 NA Intergenic Intergenic -1210 NM_007584 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-5 chr1 92909993 92910233 + 1.95434855131066 NA promoter-TSS (NM_181405) promoter-TSS (NM_181405) 576 NR_138577 75995 Mm.46179 NR_138577 ENSMUSG00000097251 5033417F24Rik 6330419D11Rik RIKEN cDNA 5033417F24 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-84 chr7 112136950 112137163 + 1.95434855131066 NA intron (NM_001360261, intron 3 of 6) intron (NM_001360261, intron 3 of 6) 21640 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-45 chr18 12305292 12305554 + 1.95434855131066 NA intron (NM_001190371, intron 1 of 9) intron (NM_001190371, intron 1 of 9) 297 NM_001190371 225187 Mm.53865 NM_001190371 ENSMUSG00000057766 Ankrd29 G630054C21|G630054C21Rik|Gm95 ankyrin repeat domain 29 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-4 chr13 47272713 47272960 + 1.95434855131066 NA Intergenic Intergenic 78833 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-14 chr10 85739982 85740240 + 1.95434855131066 NA Intergenic RMER15|LTR|ERVL -131720 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-33 chr14 34363689 34363884 + 1.95434855131066 NA Intergenic Intergenic -8393 NM_183278 69134 Mm.27156 NM_183278 ENSMUSG00000043681 Fam25c 2200001I15Rik|Fam25 family with sequence similarity 25, member C protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-65 chr4 128733869 128734072 + 1.95434855131066 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 6399 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic 2 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-12 chr2 31445571 31445810 + 1.95434855131066 NA Intergenic Intergenic -24580 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-73 chr6 31096382 31096594 + 1.95434855131066 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -33395 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-24 chr8 91901551 91901864 + 1.95434855131066 NA Intergenic Intergenic -100053 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-23 chr12 8876744 8876932 + 1.95434855131066 NA Intergenic Intergenic -44469 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-50 chr2 20654465 20654655 + 1.95434855131066 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 135047 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-27 chr9 121749090 121749303 + 1.95434855131066 NA exon (NM_010918, exon 13 of 17) exon (NM_010918, exon 13 of 17) 10747 NR_033503 320301 Mm.373883 NR_033503 E530011L22Rik - RIKEN cDNA E530011L22 gene ncRNA unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-7 chr16 26085165 26085404 + 1.95434855131066 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 20500 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-36 chr15 36901972 36902173 + 1.95434855131066 NA Intergenic Intergenic -105143 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-28 chr9 70261931 70262138 + 1.95434855131066 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 54684 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-4 chr1 77410651 77410838 + 1.95434855131066 NA intron (NM_007936, intron 5 of 17) intron (NM_007936, intron 5 of 17) 86024 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066 chr1 77845925 77846195 + 1.95434855131066 NA Intergenic Intergenic -330972 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-28 chr13 29572402 29572635 + 1.95434855131066 NA intron (NR_131896, intron 9 of 16) intron (NR_131896, intron 9 of 16) 283155 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-16 chr11 65365553 65365759 + 1.95434855131066 NA Intergenic Intergenic -77823 NR_040280 327946 Mm.383301 NR_040280 ENSMUSG00000085162 Gm12295 A730013G04 predicted gene 12295 ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-43 chr17 54168567 54168839 + 1.95434855131066 NA Intergenic Intergenic 130331 NM_022025 63993 Mm.155241 NM_022025 ENSMUSG00000023945 Slc5a7 CHT1 solute carrier family 5 (choline transporter), member 7 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-59 chr3 41603705 41603956 + 1.95434855131066 NA intron (NM_001130184, intron 8 of 10) intron (NM_001130184, intron 8 of 10) 38950 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-77 chr6 112283487 112283722 + 1.95434855131066 NA intron (NM_144799, intron 1 of 5) L2c|LINE|L2 6715 NR_045987 100503613 Mm.136719 NM_177012 5031434C07Rik - RIKEN cDNA 5031434C07 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-15 chr11 61104057 61104250 + 1.95434855131066 NA Intergenic Intergenic -36682 NM_021349 57916 Mm.265915 NM_021349 ENSMUSG00000010142 Tnfrsf13b 1200009E08Rik|Taci tumor necrosis factor receptor superfamily, member 13b protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-27 chr13 28882616 28882855 + 1.95434855131066 NA intron (NR_045054, intron 2 of 7) intron (NR_045054, intron 2 of 7) 2687 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-9 chr17 28311749 28311954 + 1.95434855131066 NA Intergenic Intergenic -1679 NR_028297 72775 Mm.201859 NM_028348 ENSMUSG00000007570 Fance 2810451D06Rik|AI415634|AW209126 Fanconi anemia, complementation group E protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-20 chr7 66341738 66342017 + 1.95434855131066 NA intron (NM_146191, intron 3 of 33) intron (NM_146191, intron 3 of 33) 39847 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-18 chr4 150055079 150055308 + 1.95434855131066 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -13261 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-61 chr3 102663102 102663296 + 1.95434855131066 NA Intergenic Intergenic -71571 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-15 chr2 180451602 180451824 + 1.95434855131066 NA Intergenic Intergenic -4532 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-46 chr18 70600695 70600890 + 1.95434855131066 NA intron (NM_010773, intron 3 of 6) intron (NM_010773, intron 3 of 6) 32500 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-25 chr8 115783063 115783285 + 1.95434855131066 NA Intergenic Intergenic -76280 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-49 chr2 6257874 6258244 + 1.95434855131066 NA intron (NR_040333, intron 3 of 6) intron (NR_040333, intron 3 of 6) -45065 NM_024208 67856 Mm.38342 NM_024208 ENSMUSG00000039063 Echdc3 2310005D12Rik|AI662097 enoyl Coenzyme A hydratase domain containing 3 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-39 chr16 33061987 33062208 + 1.95434855131066 NA promoter-TSS (NM_172823) promoter-TSS (NM_172823) -424 NM_172823 239833 Mm.131951 NM_172823 ENSMUSG00000022802 Lmln 5330415H22Rik|AI465495 leishmanolysin-like (metallopeptidase M8 family) protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-12 chr2 94053223 94053522 + 1.95434855131066 NA intron (NM_019657, intron 6 of 10) intron (NM_019657, intron 6 of 10) -42642 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066 chr10 31462033 31462268 + 1.95434855131066 NA Intergenic Intergenic -16192 NM_001359366 21987 Mm.439966 NM_009413 ENSMUSG00000000296 Tpd52l1 D53 tumor protein D52-like 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-22 chr7 79391569 79391802 + 1.95434855131066 NA promoter-TSS (NM_145946) promoter-TSS (NM_145946) -653 NM_145946 208836 Mm.349493 NM_145946 ENSMUSG00000039187 Fanci - Fanconi anemia, complementation group I protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-6 chr15 11576766 11577034 + 1.95434855131066 NA Intergenic Intergenic -177242 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-13 chr3 53068718 53069016 + 1.95434855131066 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 27320 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-60 chr3 81041231 81041493 + 1.95434855131066 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 4946 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-81 chr7 24299407 24299604 + 1.95434855131066 NA promoter-TSS (NM_009561) promoter-TSS (NM_009561) 44 NM_009561 22719 Mm.12832 NM_009561 ENSMUSG00000050605 Zfp61 - zinc finger protein 61 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-9 chr17 43406730 43406963 + 1.95434855131066 NA intron (NM_001357332, intron 2 of 20) intron (NM_001357332, intron 2 of 20) 17380 NM_001081178 224792 Mm.23478 NM_001081178 ENSMUSG00000056492 Adgrf5 8430401C09Rik|9330185D23|AI528491|Gpr116|mKIAA0758 adhesion G protein-coupled receptor F5 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-18 chr5 29852184 29852438 + 1.95434855131066 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -116375 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-21 chr8 7706121 7706388 + 1.95434855131066 NA Intergenic Intergenic 954519 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-95 chrX 73546397 73546677 + 1.95434855131066 NA exon (NM_001310537, exon 15 of 21) exon (NM_001310537, exon 15 of 21) 43451 NM_177236 320707 Mm.210095 NM_177236 ENSMUSG00000031376 Atp2b3 6430519O13Rik|Pmca3 ATPase, Ca++ transporting, plasma membrane 3 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-86 chr7 142388141 142388391 + 1.95434855131066 NA promoter-TSS (NM_009983) promoter-TSS (NM_009983) -396 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-22 chr8 11461878 11462146 + 1.95434855131066 NA intron (NM_011227, intron 1 of 1) intron (NM_011227, intron 1 of 1) -15917 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-63 chr4 105276108 105276423 + 1.95434855131066 NA Intergenic Intergenic 118918 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-10 chr19 22657722 22657954 + 1.95434855131066 NA intron (NM_177341, intron 1 of 26) intron (NM_177341, intron 1 of 26) -34781 NM_001035245 226025 Mm.131943 NM_177341 ENSMUSG00000052387 Trpm3 6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2 transient receptor potential cation channel, subfamily M, member 3 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-3 chr1 74243775 74243978 + 1.95434855131066 NA intron (NM_001357387, intron 2 of 10) intron (NM_001357387, intron 2 of 10) 7359 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-8 chr1 194672309 194672615 + 1.95434855131066 NA intron (NM_008882, intron 3 of 31) intron (NM_008882, intron 3 of 31) 52633 NM_008882 18845 Mm.2251 NM_008882 ENSMUSG00000026640 Plxna2 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 plexin A2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-31 chr13 73604838 73605032 + 1.95434855131066 NA exon (NM_146047, exon 2 of 17) exon (NM_146047, exon 2 of 17) 933 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-21 chr6 47593731 47593932 + 1.95434855131066 NA intron (NM_007971, intron 1 of 19) intron (NM_007971, intron 1 of 19) 1199 NM_001146689 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-55 chr2 148195329 148195684 + 1.95434855131066 NA Intergenic Intergenic -148537 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-71 chr5 134436288 134436486 + 1.95434855131066 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 19875 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-11 chr10 67728229 67728484 + 1.95434855131066 NA Intergenic Intergenic -156397 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-19 chr5 34932026 34932318 + 1.95434855131066 NA Intergenic Intergenic 16257 NM_001310550 403174 Mm.291225 NM_207277 ENSMUSG00000051246 Msantd1 A930005I04Rik|Gm144 Myb/SANT-like DNA-binding domain containing 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-21 chr11 117309087 117309323 + 1.95434855131066 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -22510 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-4 chr13 104452949 104453280 + 1.95434855131066 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 165279 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-7 chr15 66500511 66500730 + 1.95434855131066 NA intron (NM_019457, intron 1 of 11) intron (NM_019457, intron 1 of 11) 290 NM_019457 54562 Mm.244890 NM_019457 ENSMUSG00000022375 Lrrc6 LRTP leucine rich repeat containing 6 (testis) protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-10 chr18 82501136 82501430 + 1.95434855131066 NA intron (NM_001025245, intron 2 of 3) intron (NM_001025245, intron 2 of 3) 26160 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-57 chr2 167819598 167819811 + 1.95434855131066 NA Intergenic Intergenic -112623 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-20 chr5 64048028 64048269 + 1.95434855131066 NA non-coding (NR_045384, exon 3 of 3) non-coding (NR_045384, exon 3 of 3) 3175 NR_045384 74757 Mm.159329 NR_045384 ENSMUSG00000106219 5830416I19Rik - RIKEN cDNA 5830416I19 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-54 chr2 92055710 92055899 + 1.95434855131066 NA Intergenic Intergenic -31634 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-83 chr7 89565105 89565304 + 1.95434855131066 NA Intergenic Intergenic -38017 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-25 chr8 86889711 86889920 + 1.95434855131066 NA Intergenic ID4_|SINE|ID -4557 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-2 chr1 64804523 64804781 + 1.95434855131066 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -66902 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-32 chr13 104445586 104445802 + 1.95434855131066 NA non-coding (NR_136938, exon 22 of 27) non-coding (NR_136938, exon 22 of 27) 157859 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-79 chr6 118366351 118366547 + 1.95434855131066 NA Intergenic Intergenic 52968 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-51 chr2 28939516 28939758 + 1.95434855131066 NA Intergenic Intergenic -22969 NM_001355434 54422 Mm.21390 NM_019446 ENSMUSG00000026805 Barhl1 Dres115|MBH2 BarH like homeobox 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-11 chr2 9468238 9468466 + 1.95434855131066 NA Intergenic Intergenic 278837 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-29 chr9 103059339 103059541 + 1.95434855131066 NA intron (NM_033314, intron 3 of 13) intron (NM_033314, intron 3 of 13) 50951 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-58 chr3 19218062 19218476 + 1.95434855131066 NA exon (NM_001253390, exon 7 of 8) exon (NM_001253390, exon 7 of 8) 29974 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-25 chr12 79531755 79531946 + 1.95434855131066 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 234499 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-92 chr9 32654689 32654895 + 1.95434855131066 NA Intergenic Intergenic -41250 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-66 chr4 149821686 149821895 + 1.95434855131066 NA Intergenic Intergenic -47523 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-74 chr6 89327971 89328166 + 1.95434855131066 NA intron (NM_008881, intron 23 of 31) intron (NM_008881, intron 23 of 31) 34545 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-37 chr15 37752693 37752898 + 1.95434855131066 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) -18164 NM_001359843 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-26 chr9 49913880 49914094 + 1.95434855131066 NA Intergenic Intergenic -114594 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-2 chr11 55360974 55361188 + 1.95434855131066 NA Intergenic B2_Mm2|SINE|B2 -48824 NM_001029988 245827 Mm.339363 NM_001029988 ENSMUSG00000055333 Fat2 EMI2|Fath2|Gm523|mKIAA0811 FAT atypical cadherin 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-69 chr5 52866450 52866738 + 1.95434855131066 NA exon (NM_024213, exon 28 of 28) exon (NM_024213, exon 28 of 28) 32459 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-76 chr6 112212222 112212452 + 1.95434855131066 NA non-coding (NR_027865, exon 3 of 3) non-coding (NR_027865, exon 3 of 3) 1629 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-16 chr4 63094044 63094293 + 1.95434855131066 NA intron (NM_028326, intron 5 of 14) intron (NM_028326, intron 5 of 14) 60004 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-56 chr2 152608591 152608782 + 1.95434855131066 NA intron (NM_001037247, intron 1 of 1) intron (NM_001037247, intron 1 of 1) 4359 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-87 chr8 25278644 25278899 + 1.95434855131066 NA Intergenic Intergenic 27499 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-53 chr2 30770442 30770763 + 1.95434855131066 NA Intergenic Intergenic 31135 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-68 chr5 35717123 35717399 + 1.95434855131066 NA intron (NM_001359895, intron 5 of 17) intron (NM_001359895, intron 5 of 17) 12015 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-23 chr7 139383402 139383607 + 1.95434855131066 NA Intergenic Intergenic -5605 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-80 chr7 18779250 18779519 + 1.95434855131066 NA Intergenic Intergenic -6918 NR_024208 20958 Mm.423480 NR_024208 ENSMUSG00000109116 Sycp1-ps1 Sycp1-rs synaptonemal complex protein 1, pseudogene 1 pseudo unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-17 chr4 129013611 129013829 + 1.95434855131066 NA Intergenic Intergenic 20496 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-2 chr10 41594901 41595178 + 1.95434855131066 NA intron (NM_001358562, intron 30 of 47) intron (NM_001358562, intron 30 of 47) 27023 NR_045341 70538 Mm.399807 NR_045341 ENSMUSG00000091370 5730435O14Rik - RIKEN cDNA 5730435O14 gene ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-13 chr2 125244336 125244608 + 1.95434855131066 NA Intergenic Intergenic -2776 NM_001159646 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-24 chr12 70555371 70555622 + 1.95434855131066 NA intron (NR_037248, intron 2 of 4) intron (NR_037248, intron 2 of 4) 102342 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-41 chr17 7832213 7832410 + 1.95434855131066 NA Intergenic Intergenic -27337 NM_001081416 68655 Mm.379161 NM_001081416 ENSMUSG00000071984 Fndc1 1110027O12Rik|1110051A18Rik|mKIAA1866 fibronectin type III domain containing 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-48 chr2 4552028 4552275 + 1.95434855131066 NA intron (NM_001177843, intron 11 of 23) intron (NM_001177843, intron 11 of 23) -7603 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-7 chr1 183931892 183932141 + 1.95434855131066 NA Intergenic Intergenic 101982 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066 chr1 58861190 58861385 + 1.95434855131066 NA Intergenic Intergenic 58785 NM_001277926 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-90 chr8 88161299 88161528 + 1.95434855131066 NA intron (NM_172757, intron 11 of 14) intron (NM_172757, intron 11 of 14) 23207 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-19 chr5 102772908 102773132 + 1.95434855131066 NA intron (NM_001286468, intron 1 of 7) intron (NM_001286468, intron 1 of 7) 4210 NM_001286468 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-3 chr12 17724327 17724650 + 1.95434855131066 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 33679 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-85 chr7 130939827 130940071 + 1.95434855131066 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 3746 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-64 chr4 107461362 107461616 + 1.95434855131066 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 26770 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-94 chr9 49912302 49912492 + 1.95434855131066 NA Intergenic Intergenic -113004 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-30 chr13 45750169 45750427 + 1.95434855131066 NA intron (NM_001199304, intron 4 of 6) B1F|SINE|Alu 214693 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-9 chr10 4028184 4028374 + 1.95434855131066 NA intron (NM_001170785, intron 11 of 27) intron (NM_001170785, intron 11 of 27) 55204 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-6 chr1 178790255 178790452 + 1.95434855131066 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 261228 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-34 chr14 76730649 76730898 + 1.95434855131066 NA Intergenic Intergenic -29358 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-5 chr14 66009344 66009556 + 1.95434855131066 NA promoter-TSS (NM_178747) promoter-TSS (NM_178747) -240 NM_178747 268756 Mm.26207 NM_178747 ENSMUSG00000034450 Gulo 5730581M22|AU018375|BC028822|GLO|LGO|sfx|unh|unhip gulonolactone (L-) oxidase protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-27 chr9 65557153 65557378 + 1.95434855131066 NA intron (NM_153119, intron 5 of 5) intron (NM_153119, intron 5 of 5) 22822 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-22 chr11 119969366 119969569 + 1.95434855131066 NA intron (NM_001037754, intron 3 of 13) intron (NM_001037754, intron 3 of 13) 26375 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-6 chr15 102722878 102723088 + 1.95434855131066 NA promoter-TSS (NM_026192) promoter-TSS (NM_026192) -805 NM_026192 67488 Mm.71682 NM_026192 ENSMUSG00000023055 Calcoco1 1810009B06Rik|Cocoa|Gcap11|mKIAA1536 calcium binding and coiled coil domain 1 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-52 chr2 30093333 30093553 + 1.95434855131066 NA intron (NM_001037762, intron 1 of 4) CpG 192 NM_025428 66220 Mm.22538 NM_025428 ENSMUSG00000015335 Zdhhc12 1190004A01Rik zinc finger, DHHC domain containing 12 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-67 chr4 150010015 150010280 + 1.95434855131066 NA Intergenic Intergenic -1124 NM_173371 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-10 chr10 4332945 4333216 + 1.95434855131066 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 54395 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-72 chr6 28848178 28848407 + 1.95434855131066 NA intron (NM_019776, intron 16 of 23) intron (NM_019776, intron 16 of 23) -16545 NM_138682 192198 Mm.443660 NM_138682 ENSMUSG00000049939 Lrrc4 MBAG1|NGL-2|NGL2|NLG-2|Nag14 leucine rich repeat containing 4 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-19 chr11 96725575 96725818 + 1.95434855131066 NA intron (NM_001033186, intron 10 of 12) intron (NM_001033186, intron 10 of 12) 51859 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-35 chr15 36744068 36744320 + 1.95434855131066 NA Intergenic Intergenic 46738 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-17 chr11 75493871 75494071 + 1.95434855131066 NA exon (NM_138659, exon 15 of 42) exon (NM_138659, exon 15 of 42) 7194 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-26 chr8 121578248 121578496 + 1.95434855131066 NA intron (NM_133765, intron 1 of 8) B1F1|SINE|Alu 434 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-15 chr4 52607387 52607598 + 1.95434855131066 NA intron (NM_001356293, intron 1 of 1) intron (NM_001356293, intron 1 of 1) 286 NM_001356293 68274 Mm.85045 NM_026652 ENSMUSG00000028314 Toporsl 4930547C10Rik topoisomerase I binding, arginine/serine-rich like protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-26 chr12 87407620 87407828 + 1.95434855131066 NA Intergenic Intergenic -19369 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-8 chr16 25426996 25427266 + 1.95434855131066 NA Intergenic Intergenic 140314 NM_175165 71338 Mm.126851 NM_175165 ENSMUSG00000048399 Tprg 5430420C16Rik|Tprg1 transformation related protein 63 regulated protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-78 chr6 114929870 114930077 + 1.95434855131066 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -8152 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-5 chr14 25589100 25589305 + 1.95434855131066 NA non-coding (NR_033492, exon 1 of 1) non-coding (NR_033492, exon 1 of 1) 2398 NR_033492 77592 Mm.444871 NM_175264 4931406H21Rik - RIKEN cDNA 4931406H21 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-38 chr15 85422975 85423198 + 1.95434855131066 NA intron (NM_016843, intron 9 of 11) B4A|SINE|B4 80141 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-47 chr19 55540501 55540699 + 1.95434855131066 NA intron (NM_001360431, intron 8 of 8) L2a|LINE|L2 161604 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-12 chr10 69253740 69253932 + 1.95434855131066 NA intron (NM_001252637, intron 4 of 10) intron (NM_001252637, intron 4 of 10) 40642 NM_001252638 69288 Mm.26659 NM_001081347 ENSMUSG00000019944 Rhobtb1 1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930 Rho-related BTB domain containing 1 protein-coding unique_peak2_3_11_-1.84081249735687_2.66455625204272_1.95434855131066-14 chr3 75944714 75944977 + 1.95434855131066 NA intron (NM_001291069, intron 1 of 15) intron (NM_001291069, intron 1 of 15) 12104 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-89 chr8 84639848 84640043 + 1.95434855131066 NA 3' UTR (NM_007578, exon 47 of 47) 3' UTR (NM_007578, exon 47 of 47) 22907 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-91 chr8 124336990 124337219 + 1.95434855131066 NA intron (NM_139272, intron 12 of 15) intron (NM_139272, intron 12 of 15) 96832 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding unique_peak1_12_3_1.43259315402836_2.71629657701418_1.95434855131066-82 chr7 63914906 63915102 + 1.95434855131066 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) -1853 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak2_2_11_-2.25292191555617_2.45850154294307_1.95434855131066-11 chr2 5318969 5319213 + 1.95434855131066 NA intron (NM_001290374, intron 5 of 9) intron (NM_001290374, intron 5 of 9) -60299 NR_030601 100124465 NR_030601 ENSMUSG00000078031 Mir466d Mirn466d microRNA 466d ncRNA common_peak1_62_84_-0.716020637890868_6.05138061719227_1.95145176582346 chr15 62334644 62335568 + 1.95145176582346 NA Intergenic Intergenic -115655 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_129_150_-0.507319625262575_6.98474492669379_1.95138834222749 chr8 106168215 106169197 + 1.95138834222749 NA promoter-TSS (NM_001357382) promoter-TSS (NM_001357382) -148 NR_151676 330836 Mm.46749 NM_178798 ENSMUSG00000031904 Slc7a6 AI643885|LAT-2|LAT3|y+LAT-2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 protein-coding common_peak1_264_276_-0.362425171171937_7.93252958046322_1.9509207661563 chr1 155051451 155053906 + 1.9509207661563 NA Intergenic Intergenic 30586 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_82_104_-0.625921896775204_6.40128456927852_1.94936973286763 chr6 124414514 124415905 + 1.94936973286763 NA promoter-TSS (NM_001277330) promoter-TSS (NM_001277330) -142 NM_175933 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1-BP|PTS1R|PXR1P|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding common_peak1_126_68_0.589115164795746_6.40308203917604_1.9493697328676 chr19 8818106 8819284 + 1.9493697328676 NA promoter-TSS (NM_001081196) promoter-TSS (NM_001081196) 599 NM_027412 70387 Mm.261082 NM_027412 ENSMUSG00000071660 Ttc9c 2210019E14Rik|6330408J23Rik tetratricopeptide repeat domain 9C protein-coding common_peak1_126_68_0.589115164795746_6.40308203917604_1.9493697328676-2 chr6 124931441 124932636 + 1.9493697328676 NA intron (NM_145385, intron 1 of 8) intron (NM_145385, intron 1 of 8) 650 NM_001170341 30853 Mm.29737 NM_145385 ENSMUSG00000030120 Mlf2 AI256856|AU018944|C77284 myeloid leukemia factor 2 protein-coding common_peak2_28_47_-1.00299449977065_5.08346525083583_1.94848605280957-2 chr4 11756945 11757699 + 1.94848605280957 NA promoter-TSS (NM_019753) promoter-TSS (NM_019753) -835 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak1_56_24_0.906142866997877_5.09692762327366_1.94848605280957-2 chr5 113180504 113181199 + 1.94848605280957 NA Intergenic Intergenic -17538 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_56_24_0.906142866997877_5.09692762327366_1.94848605280957 chr8 122584579 122585300 + 1.94848605280957 NA exon (NM_016722, exon 12 of 14) exon (NM_016722, exon 12 of 14) -8032 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding unique_peak1_56_24_0.906142866997877_5.09692762327366_1.94848605280957 chr1 89121748 89122607 + 1.94848605280957 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 51762 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_28_47_-1.00299449977065_5.08346525083583_1.94848605280957 chr2 34753951 34754530 + 1.94848605280957 NA intron (NR_151469, intron 2 of 26) CpG 992 NM_001356441 66691 Mm.156452 NM_025709 ENSMUSG00000026867 Gapvd1 2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521 GTPase activating protein and VPS9 domains 1 protein-coding unique_peak2_28_47_-1.00299449977065_5.08346525083583_1.94848605280957 chr7 28956124 28956877 + 1.94848605280957 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 5832 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-3 chr4 64078497 64079236 + 1.94848218498813 NA Intergenic Intergenic -31851 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813 chr15 38420300 38420803 + 1.94848218498813 NA Intergenic Intergenic 69996 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-2 chr16 8670315 8670977 + 1.94848218498813 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 1507 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_44_17_1.04144314598427_4.69064657443445_1.94848218498813 chr5 117363692 117363897 + 1.94848218498813 NA intron (NM_021539, intron 2 of 8) intron (NM_021539, intron 2 of 8) 6489 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-2 chr5 92934702 92935119 + 1.94848218498813 NA intron (NM_001077596, intron 3 of 9) intron (NM_001077596, intron 3 of 9) 36917 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_19_37_-1.19823057047191_4.64881222820763_1.94848218498813 chr16 8847649 8848414 + 1.94848218498813 NA intron (NM_001081400, intron 3 of 3) intron (NM_001081400, intron 3 of 3) 17931 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_19_37_-1.19823057047191_4.64881222820763_1.94848218498813 chr2 180231024 180231603 + 1.94848218498813 NA Intergenic Intergenic -5454 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak2_20_37_-1.12833783785096_4.68375859451811_1.94848218498813 chr1 106630536 106630823 + 1.94848218498813 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 83611 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_20_37_-1.12833783785096_4.68375859451811_1.94848218498813-3 chr7 106214601 106215144 + 1.94848218498813 NA intron (NM_001243039, intron 1 of 3).2 intron (NM_001243039, intron 1 of 3).2 465 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813 chr4 134660851 134661480 + 1.94848218498813 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 43125 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_44_17_1.04144314598427_4.69064657443445_1.94848218498813-2 chr8 123983176 123983441 + 1.94848218498813 NA promoter-TSS (NM_019552) promoter-TSS (NM_019552) -186 NM_019552 56199 Mm.274243 NM_019552 ENSMUSG00000031974 Abcb10 Abc-me|Abcb12 ATP-binding cassette, sub-family B (MDR/TAP), member 10 protein-coding unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-7 chrX 152764794 152765657 + 1.94848218498813 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 4261 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-6 chr8 11556114 11556379 + 1.94848218498813 NA promoter-TSS (NM_011919) promoter-TSS (NM_011919) 181 NM_001302460 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-5 chr7 139797183 139797630 + 1.94848218498813 NA Intergenic Intergenic 18388 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA common_peak2_20_37_-1.12833783785096_4.68375859451811_1.94848218498813 chr4 107889613 107890018 + 1.94848218498813 NA promoter-TSS (NM_001347160) promoter-TSS (NM_001347160) -11 NM_001347160 74098 Mm.274853 NM_028754 ENSMUSG00000028608 0610037L13Rik 1110008H16Rik RIKEN cDNA 0610037L13 gene protein-coding common_peak2_20_37_-1.12833783785096_4.68375859451811_1.94848218498813-2 chr6 43292868 43293283 + 1.94848218498813 NA Intergenic Intergenic 16479 NM_130869 18291 Mm.17715 NM_130869 ENSMUSG00000029736 Nobox OG2|Og2x NOBOX oogenesis homeobox protein-coding common_peak1_20_37_-1.12833783785096_4.68375859451811_1.94848218498813 chr13 108045008 108045377 + 1.94848218498813 NA intron (NM_001048250, intron 1 of 2) intron (NM_001048250, intron 1 of 2) 718 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_19_37_-1.19823057047191_4.64881222820763_1.94848218498813 chr5 100038612 100038838 + 1.94848218498813 NA exon (NM_016690, exon 1 of 8) exon (NM_016690, exon 1 of 8) 497 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding unique_peak1_44_17_1.04144314598427_4.69064657443445_1.94848218498813-4 chr5 34573168 34573625 + 1.94848218498813 NA promoter-TSS (NM_001331081) promoter-TSS (NM_001331081) -268 NM_001024458 11518 Mm.289106 NM_013457 ENSMUSG00000029106 Add1 AI256389 adducin 1 (alpha) protein-coding common_peak1_122_144_-0.528113920187042_6.91585212992141_1.94834587779171 chr11 54060648 54062104 + 1.94834587779171 NA intron (NM_019417, intron 2 of 6) intron (NM_019417, intron 2 of 6) 7641 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding common_peak2_37_13_1.16180853248754_4.38825918830138_1.94790812833824-2 chr4 148039078 148039375 + 1.94790812833824 NA promoter-TSS (NM_011929) promoter-TSS (NM_011929) 149 NM_010840 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 methylenetetrahydrofolate reductase protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824 chr10 72619975 72620554 + 1.94790812833824 NA Intergenic Intergenic -34582 NM_025635 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-2 chr11 3443483 3443967 + 1.94790812833824 NA intron (NM_145355, intron 1 of 7) intron (NM_145355, intron 1 of 7) -8712 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-8 chr3 105056071 105056593 + 1.94790812833824 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -3186 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-7 chr18 80551757 80552395 + 1.94790812833824 NA Intergenic B1_Mur4|SINE|Alu -7530 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-6 chr5 140604671 140605243 + 1.94790812833824 NA Intergenic Intergenic -2384 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-4 chr15 53115836 53116528 + 1.94790812833824 NA intron (NM_010162, intron 1 of 10) PB1D9|SINE|Alu 230001 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-3 chr15 81069439 81070096 + 1.94790812833824 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 35280 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-4 chr14 30594080 30594418 + 1.94790812833824 NA Intergenic Intergenic 16061 NM_001310682 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824 chr1 165459986 165460389 + 1.94790812833824 NA exon (NM_028759, exon 1 of 19) exon (NM_028759, exon 1 of 19) 276 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-9 chr7 19085165 19085801 + 1.94790812833824 NA intron (NM_032418, intron 1 of 14) intron (NM_032418, intron 1 of 14) -1345 NR_037282 100526504 NR_037282 ENSMUSG00000092659 Mir3100 mir-3100|mmu-mir-3100 microRNA 3100 ncRNA unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-7 chr7 29453207 29453825 + 1.94790812833824 NA intron (NM_001081028, intron 2 of 22) intron (NM_001081028, intron 2 of 22) 51944 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-3 chr13 52236043 52236644 + 1.94790812833824 NA Intergenic Intergenic 139602 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-6 chr16 26645345 26645901 + 1.94790812833824 NA intron (NR_152416, intron 2 of 12) intron (NR_152416, intron 2 of 12) 63918 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding common_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824 chr13 70804235 70804816 + 1.94790812833824 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 37286 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-4 chr17 5668730 5669306 + 1.94790812833824 NA intron (NM_146073, intron 2 of 8) intron (NM_146073, intron 2 of 8) -129639 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak2_37_13_1.16180853248754_4.38825918830138_1.94790812833824 chr11 3914531 3914876 + 1.94790812833824 NA promoter-TSS (NM_153142) promoter-TSS (NM_153142) -39 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-6 chr8 71276074 71276320 + 1.94790812833824 NA intron (NM_001142322, intron 1 of 39) intron (NM_001142322, intron 1 of 39) 3483 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824 chr1 128359319 128359651 + 1.94790812833824 NA exon (NM_001313695, exon 1 of 16) exon (NM_001313695, exon 1 of 16) 220 NM_001313695 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-5 chr15 88956801 88957497 + 1.94790812833824 NA intron (NM_133241, intron 11 of 11) intron (NM_133241, intron 11 of 11) -2731 NM_172818 239591 Mm.86807 NM_172818 ENSMUSG00000022388 Ttll8 1700019P01Rik|4933401B17 tubulin tyrosine ligase-like family, member 8 protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-10 chr8 18723971 18724620 + 1.94790812833824 NA intron (NM_007426, intron 1 of 8) RLTR20A4|LTR|ERVK 17267 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-5 chr4 131843601 131843960 + 1.94790812833824 NA intron (NM_025297, intron 1 of 9) CpG 309 NM_025297 26922 Mm.192706 NM_025297 ENSMUSG00000028910 Mecr AI195831|NRBF-1|Nrbf1 mitochondrial trans-2-enoyl-CoA reductase protein-coding common_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-5 chr18 84675746 84676162 + 1.94790812833824 NA intron (NM_023149, intron 5 of 11) intron (NM_023149, intron 5 of 11) 6105 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-2 chr13 34498386 34498858 + 1.94790812833824 NA Intergenic Intergenic -153440 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-2 chr13 43019298 43019655 + 1.94790812833824 NA intron (NM_001005740, intron 2 of 12) intron (NM_001005740, intron 2 of 12) -103363 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_37_13_1.16180853248754_4.38825918830138_1.94790812833824-2 chr4 109432752 109433237 + 1.94790812833824 NA exon (NM_153392, exon 12 of 18) exon (NM_153392, exon 12 of 18) 17347 NM_001145948 230603 Mm.33091 NM_153392 ENSMUSG00000028555 Ttc39a 4922503N01Rik tetratricopeptide repeat domain 39A protein-coding unique_peak1_36_13_1.12360581899984_4.36915783155752_1.94790812833824-3 chr14 66223928 66224346 + 1.94790812833824 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) -10313 NM_001360233 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_15_31_-1.2699599557822_4.3650200221089_1.94790812833823 chr4 19575305 19575669 + 1.94790812833823 NA intron (NM_025476, intron 1 of 9) intron (NM_025476, intron 1 of 9) 421 NM_025476 66302 Mm.440686 NM_025476 ENSMUSG00000028229 Rmdn1 Fam82b|RMD-1 regulator of microtubule dynamics 1 protein-coding common_peak2_15_31_-1.2699599557822_4.3650200221089_1.94790812833823 chr13 112778388 112779105 + 1.94790812833823 NA Intergenic Intergenic -22031 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding unique_peak2_15_31_-1.2699599557822_4.3650200221089_1.94790812833823-2 chr8 8657564 8658042 + 1.94790812833823 NA intron (NM_010111, intron 1 of 4) intron (NM_010111, intron 1 of 4) 2970 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak2_15_31_-1.2699599557822_4.3650200221089_1.94790812833823 chr12 75669125 75669414 + 1.94790812833823 NA intron (NM_028203, intron 1 of 1) intron (NM_028203, intron 1 of 1) 268 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak2_15_31_-1.2699599557822_4.3650200221089_1.94790812833823-2 chr19 10144862 10145425 + 1.94790812833823 NA Intergenic Intergenic -37745 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding common_peak1_90_45_0.696580288398986_5.87185210025651_1.94703782389473 chr2 76674890 76675922 + 1.94703782389473 NA promoter-TSS (NM_031256) promoter-TSS (NM_031256) 91 NM_031256 83435 Mm.41636 NM_031256 ENSMUSG00000002733 Plekha3 FAPP1 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 protein-coding common_peak1_91_45_0.712236366165998_5.87968013914001_1.94703782389473 chr18 84680704 84681824 + 1.94703782389473 NA intron (NM_023149, intron 2 of 11) intron (NM_023149, intron 2 of 11) 795 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_120_64_0.60594294794787_6.32533928700239_1.94574237117399 chr5 121583826 121584884 + 1.94574237117399 NA intron (NM_009656, intron 1 of 12) intron (NM_009656, intron 1 of 12) 9469 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513 chr13 23531703 23532163 + 1.94520747672513 NA TTS (NM_153173) TTS (NM_153173) 889 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-24 chr8 10994336 10994660 + 1.94520747672513 NA intron (NM_001081212, intron 1 of 1) intron (NM_001081212, intron 1 of 1) -13352 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-11 chr8 45583669 45583969 + 1.94520747672513 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -43932 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-5 chr11 70562664 70562887 + 1.94520747672513 NA promoter-TSS (NM_001045959) promoter-TSS (NM_001045959) -106 NM_001045964 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-13 chr17 46771960 46772387 + 1.94520747672513 NA promoter-TSS (NM_025966) promoter-TSS (NM_025966) -462 NM_025966 67101 Mm.358702 NM_025966 ENSMUSG00000062619 2310039H08Rik - RIKEN cDNA 2310039H08 gene protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-6 chr18 77879373 77879639 + 1.94520747672513 NA intron (NM_013831, intron 14 of 14) intron (NM_013831, intron 14 of 14) -58961 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-18 chr3 101077566 101078128 + 1.94520747672513 NA intron (NM_011197, intron 2 of 8) intron (NM_011197, intron 2 of 8) 32319 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-20 chr4 150050654 150050896 + 1.94520747672513 NA Intergenic Intergenic -17679 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-2 chr10 75120098 75120578 + 1.94520747672513 NA intron (NM_001081412, intron 1 of 22) ORR1D1|LTR|ERVL-MaLR 59442 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-17 chr3 90004655 90005058 + 1.94520747672513 NA intron (NM_001357307, intron 24 of 26) intron (NM_001357307, intron 24 of 26) 6096 NR_045749 100503469 Mm.440636 NR_045749 ENSMUSG00000105552 Gm19710 - predicted gene, 19710 ncRNA unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-7 chr2 50456603 50457094 + 1.94520747672513 NA Intergenic Intergenic 101823 NR_154590 102634280 NR_154590 Gm48908 - predicted gene 48908 ncRNA unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-26 chr9 78503482 78503758 + 1.94520747672513 NA Intergenic Intergenic -21896 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-2 chr11 88955060 88955369 + 1.94520747672513 NA intron (NM_029023, intron 1 of 12) intron (NM_029023, intron 1 of 12) 228 NM_029023 74617 Mm.34126 NM_029023 ENSMUSG00000000278 Scpep1 2410018F01Rik|4833411K15Rik|AI957256|Risc serine carboxypeptidase 1 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-3 chr11 16763877 16764363 + 1.94520747672513 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 11917 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513 chr1 64087928 64088314 + 1.94520747672513 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 33268 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-8 chr4 137757869 137758167 + 1.94520747672513 NA intron (NM_001287172, intron 2 of 11) intron (NM_001287172, intron 2 of 11) 8457 NM_001287172 11647 Mm.288186 NM_007431 ENSMUSG00000028766 Alpl ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-19 chr3 107830276 107830705 + 1.94520747672513 NA Intergenic Intergenic -46740 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-21 chr6 72276656 72277113 + 1.94520747672513 NA Intergenic Intergenic -27726 NM_001282071 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-10 chr6 145906646 145906878 + 1.94520747672513 NA Intergenic Intergenic -25111 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-4 chr15 27801352 27801688 + 1.94520747672513 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -119978 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-10 chr15 53112159 53112526 + 1.94520747672513 NA intron (NM_010162, intron 1 of 10) L1MD3|LINE|L1 233841 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-8 chr14 55539741 55540092 + 1.94520747672513 NA promoter-TSS (NM_028994) promoter-TSS (NM_028994) -350 NM_028994 74551 Mm.29856 NM_028994 ENSMUSG00000040618 Pck2 1810010O14Rik|9130022B02Rik|PEPCK-M phosphoenolpyruvate carboxykinase 2 (mitochondrial) protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-14 chr18 14027614 14028172 + 1.94520747672513 NA Intergenic Intergenic -55160 NM_145492 225207 Mm.40325 NM_145492 ENSMUSG00000024420 Zfp521 B930086A16Rik|Evi3|Znf521 zinc finger protein 521 protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513 chr1 43143582 43143977 + 1.94520747672513 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 20182 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-5 chr15 93682670 93683042 + 1.94520747672513 NA Intergenic Intergenic -86965 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-9 chr15 13182040 13182417 + 1.94520747672513 NA Intergenic Intergenic -8553 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-23 chr8 8658225 8658488 + 1.94520747672513 NA intron (NM_010111, intron 1 of 4) intron (NM_010111, intron 1 of 4) 2417 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-12 chr17 30190597 30191060 + 1.94520747672513 NA intron (NM_001356265, intron 4 of 5) B3|SINE|B2 185789 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-6 chr12 70116806 70117231 + 1.94520747672513 NA Intergenic Intergenic -4983 NR_104397 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-16 chr2 38534871 38535278 + 1.94520747672513 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 23198 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-15 chr18 46484094 46484403 + 1.94520747672513 NA Intergenic Intergenic -18432 NR_045438 72076 Mm.82766 NM_028086 Mospd4 2010013H21Rik motile sperm domain containing 4 pseudo unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-22 chr6 72293372 72293906 + 1.94520747672513 NA Intergenic Intergenic -10971 NM_001282071 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-11 chr15 73247324 73247694 + 1.94520747672513 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 7373 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-7 chr12 113099899 113100451 + 1.94520747672513 NA intron (NM_001346696, intron 1 of 19) intron (NM_001346696, intron 1 of 19) 1897 NM_054081 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-25 chr8 121903975 121904298 + 1.94520747672513 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 3550 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513 chr5 112293055 112293346 + 1.94520747672513 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 16509 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-3 chr13 42050267 42050851 + 1.94520747672513 NA Intergenic Intergenic -1462 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding unique_peak1_27_8_1.36177409234961_3.85081204761712_1.94520747672513-4 chr11 51949860 51950140 + 1.94520747672513 NA Intergenic Intergenic -17631 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak2_9_23_-1.52821057817624_3.82085721163304_1.94520747672513-9 chr5 110135358 110135623 + 1.94520747672513 NA promoter-TSS (NM_001289580) promoter-TSS (NM_001289580) -340 NM_172717 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding common_peak1_114_60_0.624717883414002_6.24309627926989_1.94455158049203 chr3 75556280 75556811 + 1.94455158049203 NA promoter-TSS (NM_001357514) promoter-TSS (NM_001357514) 307 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding common_peak2_789_739_-0.21532183420689_9.42372054341287_1.94439735499443 chr15 77797129 77801332 + 1.94439735499443 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) -42220 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak2_279_173_0.387247557977344_7.6365672748374_1.94428579361238 chr8 26975963 26977092 + 1.94428579361238 NA promoter-TSS (NM_001101502) promoter-TSS (NM_001101502) -809 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378-4 chr2 32895972 32896428 + 1.94354392707378 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 20066 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378-5 chr2 75613548 75613954 + 1.94354392707378 NA Intergenic Intergenic -45508 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak2_17_34_-1.23051678869902_4.51402462259546_1.94354392707378-2 chr3 41184103 41184455 + 1.94354392707378 NA Intergenic Intergenic -101233 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak2_17_34_-1.23051678869902_4.51402462259546_1.94354392707378-3 chr9 94537733 94538303 + 1.94354392707378 NA promoter-TSS (NM_001033145) promoter-TSS (NM_001033145) 63 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding unique_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378-2 chr15 62209931 62210583 + 1.94354392707378 NA intron (NR_132746, intron 3 of 6) intron (NR_132746, intron 3 of 6) 9194 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_17_34_-1.23051678869902_4.51402462259546_1.94354392707378-2 chr8 119604912 119605159 + 1.94354392707378 NA intron (NM_021441, intron 1 of 14) CpG 205 NM_021441 21341 Mm.41977 NM_021441 ENSMUSG00000031832 Taf1c Tafi95|mTAFI95 TATA-box binding protein associated factor, RNA polymerase I, C protein-coding common_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378 chr2 180218243 180218867 + 1.94354392707378 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 7304 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak2_17_34_-1.23051678869902_4.51402462259546_1.94354392707378 chr17 56040424 56040941 + 1.94354392707378 NA intron (NM_013733, intron 1 of 13) intron (NM_013733, intron 1 of 13) 266 NM_013733 27221 Mm.391010 NM_013733 ENSMUSG00000002835 Chaf1a AL023013|AL024058|CAF-1|Cac1p chromatin assembly factor 1, subunit A (p150) protein-coding unique_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378 chr13 34697100 34697399 + 1.94354392707378 NA Intergenic Intergenic -42393 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_17_34_-1.23051678869902_4.51402462259546_1.94354392707378 chr17 36951233 36951618 + 1.94354392707378 NA exon (NM_029632, exon 1 of 3) exon (NM_029632, exon 1 of 3) 367 NM_029632 76497 Mm.46176 NM_029632 ENSMUSG00000036398 Ppp1r11 1500041B02Rik|AV117883|Hcgv|Tcte5|Tctex-5|Tctex5 protein phosphatase 1, regulatory (inhibitor) subunit 11 protein-coding unique_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378-6 chr2 166237780 166238166 + 1.94354392707378 NA Intergenic Intergenic -35935 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 - predicted gene 11468 ncRNA unique_peak1_40_15_1.07801454717368_4.53900727358684_1.94354392707378-3 chr17 78834938 78835272 + 1.94354392707378 NA promoter-TSS (NM_181649) promoter-TSS (NM_181649) 276 NM_001081179 320473 Mm.46309 NM_028084 ENSMUSG00000039414 Heatr5b 2010013B10Rik|A230048G03Rik|AV071430|D330050P16Rik|mKIAA1414 HEAT repeat containing 5B protein-coding common_peak2_225_135_0.435804880836668_7.30536528166867_1.94190889781375 chr4 139192943 139194177 + 1.94190889781375 NA promoter-TSS (NM_001271405) promoter-TSS (NM_001271405) -551 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_147_82_0.541811350564029_6.64594510662894_1.93818912282518 chr3 153911495 153912971 + 1.93818912282518 NA promoter-TSS (NR_028095) promoter-TSS (NR_028095) -30 NR_028095 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding common_peak1_88_110_-0.606108639950179_6.49136154637502_1.93673393770197-2 chr13 111489032 111489892 + 1.93673393770197 NA intron (NM_028487, intron 1 of 12) CpG 665 NM_028487 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_134_73_0.575695404451844_6.49730106785487_1.93673393770197 chr4 84202834 84204353 + 1.93673393770197 NA Intergenic Intergenic -158714 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak1_88_110_-0.606108639950179_6.49136154637502_1.93673393770197 chr1 133694494 133695811 + 1.93673393770197 NA Intergenic Intergenic -5044 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_86_42_0.729483868902623_5.79100668915341_1.9353683478336 chr7 25786628 25787811 + 1.9353683478336 NA intron (NM_009465, intron 2 of 19) intron (NM_009465, intron 2 of 19) 1514 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak1_97_49_0.682446974018086_5.98507967678377_1.93463368846707 chr5 103757786 103758522 + 1.93463368846707 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 3581 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_155_87_0.532832198898783_6.72584771808669_1.93414911025543 chr19 55541523 55542556 + 1.93414911025543 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 160165 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_105_127_-0.561284924303384_6.71935753784831_1.93414911025541 chr1 74236620 74237660 + 1.93414911025541 NA intron (NM_001357387, intron 2 of 10) CpG 623 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_170_97_0.509069835311605_6.86924476177101_1.9327917305633 chr3 158035668 158037192 + 1.9327917305633 NA promoter-TSS (NM_001289524) promoter-TSS (NM_001289524) 209 NM_001093752 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak1_166_185_-0.449286439081487_7.31451559156729_1.93160449474508 chr10 111542897 111544615 + 1.93160449474508 NA Intergenic Intergenic 37470 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding unique_peak1_61_27_0.863094617495178_5.23890223080519_1.93089126088446 chr10 111298682 111299687 + 1.93089126088446 NA intron (NM_027914, intron 1 of 1) intron (NM_027914, intron 1 of 1) 505 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak2_32_51_-0.933373733743333_5.23375285126943_1.93089126088446 chr1 136414865 136415508 + 1.93089126088446 NA promoter-TSS (NM_026500) promoter-TSS (NM_026500) -85 NM_026500 67997 Mm.385462 NM_026500 ENSMUSG00000026404 Ddx59 1210002B07Rik|4833411G06Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 protein-coding common_peak2_61_27_0.863094617495178_5.23890223080519_1.93089126088446 chr14 57998717 57999222 + 1.93089126088446 NA intron (NM_028643, intron 1 of 11) CpG 293 NM_028643 68514 Mm.26834 NM_028643 ENSMUSG00000021973 Micu2 1110008L20Rik|4833427E09Rik|AU041871|Efha1|Smhs2 mitochondrial calcium uptake 2 protein-coding common_peak2_32_51_-0.933373733743333_5.23375285126943_1.93089126088446-2 chr2 112492581 112493118 + 1.93089126088446 NA promoter-TSS (NM_028844) promoter-TSS (NM_028844) -115 NM_028844 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak1_61_27_0.863094617495178_5.23890223080519_1.93089126088446 chr2 90544248 90545315 + 1.93089126088446 NA intron (NM_008982, intron 1 of 23) B4|SINE|B4 35866 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_128_69_0.590740135918677_6.42465308490431_1.93014370323847 chr15 53341633 53342601 + 1.93014370323847 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 4066 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_128_69_0.590740135918677_6.42465308490431_1.93014370323847-3 chr9 106376953 106378006 + 1.93014370323847 NA Intergenic Intergenic 8847 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_127_69_0.579592088553097_6.41907906122151_1.93014370323847 chr19 55542817 55543491 + 1.93014370323847 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 159050 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_128_69_0.590740135918677_6.42465308490431_1.93014370323847-2 chr3 88562241 88563362 + 1.93014370323847 NA intron (NM_033526, intron 5 of 10) intron (NM_033526, intron 5 of 10) 9085 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak2_223_238_-0.390332652908556_7.70570048152647_1.9272346001514 chr8 84984892 84986614 + 1.9272346001514 NA Intergenic Intergenic -4842 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_103_53_0.656540713145156_6.08315785873605_1.92708524847946 chr1 74386638 74387798 + 1.92708524847946 NA Intergenic Intergenic -4391 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak1_103_53_0.656540713145156_6.08315785873605_1.92708524847946-2 chr14 55559737 55560699 + 1.92708524847946 NA promoter-TSS (NM_001199009) promoter-TSS (NM_001199009) 189 NM_133734 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding unique_peak2_46_67_-0.813801537948285_5.6805620722762_1.92631927296918 chr3 57289193 57289978 + 1.92631927296918 NA intron (NM_001355130, intron 5 of 5) intron (NM_001355130, intron 5 of 5) 12403 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_46_67_-0.813801537948285_5.6805620722762_1.92631927296918 chr15 59480159 59480791 + 1.92631927296918 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) 106277 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak1_81_39_0.749031472713075_5.6964438312439_1.92631927296918 chr4 155177354 155178333 + 1.92631927296918 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 44692 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_202_119_0.462626495769634_7.13820384349334_1.92607939188153 chr3 95817772 95819234 + 1.92607939188153 NA intron (NM_001081293, intron 1 of 10) intron (NM_001081293, intron 1 of 10) 450 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak2_202_119_0.462626495769634_7.13820384349334_1.92607939188153 chr3 95282025 95283899 + 1.92607939188153 NA promoter-TSS (NM_199475) promoter-TSS (NM_199475) 27 NM_199475 75007 Mm.279287 NM_133858 ENSMUSG00000038712 Mindy1 1810005H09Rik|4930504E06Rik|AA562754|AA960384|AW561904|Fam63a|cI-40|mKIAA1390|ni MINDY lysine 48 deubiquitinase 1 protein-coding common_peak2_78_100_-0.640643816476518_6.33788957451354_1.92549666671197 chr1 31155886 31157015 + 1.92549666671197 NA intron (NR_033445, intron 2 of 2) intron (NR_033445, intron 2 of 2) -19985 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding common_peak2_53_22_0.948984894843147_4.99805440347859_1.92432670720421 chr2 33216076 33216538 + 1.92432670720421 NA 5' UTR (NM_011923, exon 1 of 5) 5' UTR (NM_011923, exon 1 of 5) 346 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_53_22_0.948984894843147_4.99805440347859_1.92432670720421 chr11 72491640 72492518 + 1.92432670720421 NA Intergenic Intergenic -2159 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_52_22_0.922208099212847_4.98466600566344_1.92432670720421 chr15 102968560 102969351 + 1.92432670720421 NA intron (NM_010462, intron 1 of 1) intron (NM_010462, intron 1 of 1) 2159 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding unique_peak1_52_22_0.922208099212847_4.98466600566344_1.92432670720421-2 chr2 26145036 26145704 + 1.92432670720421 NA Intergenic Intergenic -4864 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak1_52_22_0.922208099212847_4.98466600566344_1.92432670720421 chr9 119341554 119342310 + 1.92432670720421 NA intron (NM_001357516, intron 2 of 10) CpG-15485 638 NM_001357516 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding unique_peak2_26_44_-1.01225126585627_4.98572746340154_1.92432670720421 chr9 44720547 44721295 + 1.92432670720421 NA intron (NM_153537, intron 4 of 21) intron (NM_153537, intron 4 of 21) 14277 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_53_22_0.948984894843147_4.99805440347859_1.92432670720421-2 chr3 142882234 142882800 + 1.92432670720421 NA promoter-TSS (NM_178654) promoter-TSS (NM_178654) 22 NR_152127 320229 Mm.187582 NR_152127 9530052C20Rik - RIKEN cDNA 9530052C20 gene ncRNA common_peak1_53_22_0.948984894843147_4.99805440347859_1.92432670720421 chr3 113953464 113954043 + 1.92432670720421 NA Intergenic Intergenic -76787 NM_007729 12814 Mm.209715 NM_007729 ENSMUSG00000027966 Col11a1 C530001D20Rik|cho collagen, type XI, alpha 1 protein-coding common_peak2_68_90_-0.684105736174987_6.1657417721112_1.92348377315862 chr18 24529125 24530205 + 1.92348377315862 NA intron (NM_001360807, intron 1 of 7) CpG 539 NM_144861 225283 Mm.28427 NM_144861 ENSMUSG00000040446 Rprd1a C77387|mKIAA4077 regulation of nuclear pre-mRNA domain containing 1A protein-coding common_peak2_68_90_-0.684105736174987_6.1657417721112_1.92348377315862-2 chr6 134927201 134928475 + 1.92348377315862 NA Intergenic Intergenic -1254 NR_037956 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak1_109_57_0.633796326650122_6.17487915845263_1.9234837731586 chr6 85346547 85348137 + 1.9234837731586 NA intron (NM_001003955, intron 3 of 5) intron (NM_001003955, intron 3 of 5) -10969 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA common_peak1_115_61_0.613661731417147_6.26102717609545_1.92313441404634 chr1 58726729 58728300 + 1.92313441404634 NA intron (NM_001355056, intron 2 of 8) intron (NM_001355056, intron 2 of 8) -3038 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_101_122_-0.558903025348578_6.66306299266495_1.92201859988386 chr10 60826869 60828154 + 1.92201859988386 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 4070 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_101_122_-0.558903025348578_6.66306299266495_1.92201859988386 chr11 100320002 100321428 + 1.92201859988386 NA exon (NM_011508, exon 2 of 4) exon (NM_011508, exon 2 of 4) 766 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding common_peak2_100_122_-0.573016606081826_6.65600620229833_1.92201859988386 chr6 13607417 13608299 + 1.92201859988386 NA non-coding (NR_155435, exon 1 of 4) non-coding (NR_155435, exon 1 of 4) 240 NR_155435 101118 Mm.254845 NM_028990 ENSMUSG00000029569 Tmem168 5730526F17Rik|8430437G11Rik|AI462344|AI504145 transmembrane protein 168 protein-coding common_peak1_66_30_0.827356707253513_5.36787466401363_1.92155650516079-3 chr7 74172846 74173718 + 1.92155650516079 NA Intergenic Intergenic -159600 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak1_66_30_0.827356707253513_5.36787466401363_1.92155650516079-2 chr7 16209091 16209784 + 1.92155650516079 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 12556 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_66_30_0.827356707253513_5.36787466401363_1.92155650516079-2 chr4 45107729 45108053 + 1.92155650516079 NA intron (NM_001134646, intron 1 of 2) CpG 222 NM_001134646 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 protein-coding common_peak1_66_30_0.827356707253513_5.36787466401363_1.92155650516079 chr5 88553713 88554087 + 1.92155650516079 NA promoter-TSS (NM_023054) promoter-TSS (NM_023054) -562 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak2_66_30_0.827356707253513_5.36787466401363_1.92155650516079 chr14 121238669 121238974 + 1.92155650516079 NA intron (NM_134082, intron 10 of 26) intron (NM_134082, intron 10 of 26) -9885 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak2_35_55_-0.915643673384899_5.34953308536515_1.92155650516079 chr11 69016092 69016841 + 1.92155650516079 NA intron (NM_001281465, intron 1 of 22) intron (NM_001281465, intron 1 of 22) 555 NM_001013256 68964 Mm.285785 NM_001013256 ENSMUSG00000020898 Ctc1 1500010J02Rik|AAF-132|AAF132 CTS telomere maintenance complex component 1 protein-coding unique_peak1_66_30_0.827356707253513_5.36787466401363_1.92155650516079 chr3 52267508 52268224 + 1.92155650516079 NA promoter-TSS (NM_019739) promoter-TSS (NM_019739) -471 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding unique_peak2_43_63_-0.82082459740294_5.58958770129853_1.92045994443868 chr5 149462359 149463306 + 1.92045994443868 NA intron (NM_029464, intron 5 of 6) intron (NM_029464, intron 5 of 6) 23172 NM_001310765 75860 Mm.159605 NM_029464 ENSMUSG00000029660 Tex26 4930588N13Rik testis expressed 26 protein-coding common_peak2_43_63_-0.82082459740294_5.58958770129853_1.92045994443868 chr10 71118366 71119269 + 1.92045994443868 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 40873 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_76_36_0.771381086542239_5.59514390890007_1.92045994443867 chr11 96829276 96829928 + 1.92045994443867 NA promoter-TSS (NM_001130450) promoter-TSS (NM_001130450) -100 NM_001130450 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_76_36_0.771381086542239_5.59514390890007_1.92045994443867-2 chr14 25527567 25528354 + 1.92045994443867 NA intron (NM_183208, intron 2 of 23) MIRb|SINE|MIR -6479 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_215_231_-0.399544103373901_7.65820894344062_1.91991056661554 chr6 88961269 88963799 + 1.91991056661554 NA Intergenic Intergenic 60283 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_92_46_0.696696290102599_5.90293699672894_1.91948339504296 chr12 55199317 55200323 + 1.91948339504296 NA intron (NM_028527, intron 1 of 4).2 CpG 228 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak1_156_88_0.525683880058009_6.7385753709954_1.91885007462478 chr3 113629548 113630726 + 1.91885007462478 NA promoter-TSS (NM_026043) promoter-TSS (NM_026043) 12 NM_001287015 67225 Mm.316928 NM_026043 ENSMUSG00000027981 Rnpc3 2810441O16Rik|AI447568|C030014B17Rik RNA-binding region (RNP1, RRM) containing 3 protein-coding common_peak1_135_74_0.566902207694083_6.51226979434292_1.91880734435424-2 chr7 142059941 142061908 + 1.91880734435424 NA promoter-TSS (NM_001347560) promoter-TSS (NM_001347560) -71 NM_001347560 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding common_peak1_135_74_0.566902207694083_6.51226979434292_1.91880734435424 chr4 120517528 120518909 + 1.91880734435424 NA intron (NM_001355424, intron 11 of 14) intron (NM_001355424, intron 11 of 14) -14013 NM_177570 194219 Mm.29788 NM_177570 ENSMUSG00000047518 Slfnl1 4933406A14Rik schlafen like 1 protein-coding common_peak1_246_150_0.412146886310898_7.44447818248053_1.91585699408751 chr4 59805856 59807744 + 1.91585699408751 NA intron (NM_172468, intron 1 of 8) intron (NM_172468, intron 1 of 8) 1150 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak1_203_120_0.457693263142823_7.14770986884601_1.9146154210205 chr4 42999029 43000451 + 1.9146154210205 NA intron (NM_009503, intron 1 of 16) CpG 767 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak1_203_120_0.457693263142823_7.14770986884601_1.9146154210205-2 chr7 128523707 128524883 + 1.9146154210205 NA intron (NM_013863, intron 1 of 3) CpG 712 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_84_106_-0.61903420988406_6.43194988145912_1.91136421629793 chr2 90485726 90486993 + 1.91136421629793 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -7185 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_98_50_0.668421265080474_6.00663597451173_1.90920644271202-4 chr8 83698306 83699610 + 1.90920644271202 NA intron (NM_177262, intron 1 of 21) CpG 221 NM_177262 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding common_peak1_98_50_0.668421265080474_6.00663597451173_1.90920644271202-3 chr16 91485312 91486150 + 1.90920644271202 NA intron (NM_010508, intron 1 of 10) intron (NM_010508, intron 1 of 10) 516 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak1_98_50_0.668421265080474_6.00663597451173_1.90920644271202 chr14 119098936 119099835 + 1.90920644271202 NA promoter-TSS (NM_001081252) promoter-TSS (NM_001081252) 49 NM_001081252 66435 Mm.213406 NM_025561 ENSMUSG00000042104 Uggt2 1810064L21Rik|3110001A05Rik|3110027P15Rik|A230065J02Rik|AW047562|Ugcgl2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding common_peak1_98_50_0.668421265080474_6.00663597451173_1.90920644271202-2 chr16 33878462 33879255 + 1.90920644271202 NA intron (NM_001145884, intron 4 of 14) intron (NM_001145884, intron 4 of 14) 49193 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_60_81_-0.710395935315208_6.00235403696048_1.909206442712 chr4 41349051 41349630 + 1.909206442712 NA intron (NM_001355509, intron 1 of 5) CpG 344 NM_023305 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding common_peak2_60_81_-0.710395935315208_6.00235403696048_1.909206442712 chr10 108446966 108448308 + 1.909206442712 NA Intergenic Intergenic 115448 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_266_164_0.395765634808324_7.56420503164998_1.90719593618328 chr19 7381967 7383724 + 1.90719593618328 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -158 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA common_peak1_87_43_0.712688804386518_5.81577602083056_1.90631118933002 chr11 99572425 99573267 + 1.90631118933002 NA Intergenic Intergenic -6216 NM_023511 69473 Mm.158281 NM_023511 ENSMUSG00000047564 Krtap3-1 2310003K17Rik|KAP3.1|KRTAP3.1 keratin associated protein 3-1 protein-coding common_peak1_80_101_-0.619042888843881_6.36290389754955_1.90574708771265 chr11 51856545 51857639 + 1.90574708771265 NA intron (NM_001357588, intron 1 of 12) CpG 389 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak2_23_41_-1.08144177633351_4.85159653461201_1.90347783429882-2 chr8 110699024 110699623 + 1.90347783429882 NA intron (NR_151675, intron 13 of 17) intron (NR_151675, intron 13 of 17) -22153 NM_198625 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding unique_peak2_23_41_-1.08144177633351_4.85159653461201_1.90347783429882 chr18 67815551 67816058 + 1.90347783429882 NA intron (NM_027556, intron 8 of 45) intron (NM_027556, intron 8 of 45) 15697 NM_027556 70799 Mm.30857 NM_027556 ENSMUSG00000024542 Cep192 4631422C13Rik|D430014P18Rik centrosomal protein 192 protein-coding common_peak1_49_20_0.969981439373548_4.87730814246553_1.90347783429882 chr17 45433883 45434387 + 1.90347783429882 NA promoter-TSS (NM_152810) promoter-TSS (NM_152810) 304 NR_130961 105246278 Mm.206588 NR_130960 ENSMUSG00000097119 B230354K17Rik - RIKEN cDNA B230354K17 gene ncRNA common_peak1_49_20_0.969981439373548_4.87730814246553_1.90347783429882-2 chr9 45849406 45850060 + 1.90347783429882 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 11188 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak1_49_20_0.969981439373548_4.87730814246553_1.90347783429882 chr19 55795758 55796132 + 1.90347783429882 NA intron (NM_001331146, intron 4 of 14) intron (NM_001331146, intron 4 of 14) 54135 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_49_20_0.969981439373548_4.87730814246553_1.90347783429882-2 chr3 98419982 98420653 + 1.90347783429882 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 36714 NM_001111336 15495 Mm.14309 NM_008294 ENSMUSG00000095143 Hsd3b4 - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4 protein-coding common_peak1_104_54_0.643776901675355_6.10324816436234_1.90343423105515 chr4 107452222 107453043 + 1.90343423105515 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 17913 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak1_147_167_-0.475466640867807_7.15458410234486_1.90331276216901 chr5 30154610 30156311 + 1.90331276216901 NA promoter-TSS (NM_178878) promoter-TSS (NM_178878) 207 NM_001289798 231086 Mm.291463 NM_145558 ENSMUSG00000059447 Hadhb 4930479F15Rik|Mtpb|TP-beta hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein-coding common_peak2_75_96_-0.637804367215225_6.28101065857951_1.90227269246457 chr5 31575936 31576582 + 1.90227269246457 NA Intergenic Intergenic -4862 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak2_74_96_-0.656778377807365_6.27152365328345_1.90227269246457 chr4 82166538 82167456 + 1.90227269246457 NA Intergenic Intergenic -101107 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA common_peak1_57_25_0.874473303236175_5.13767636975918_1.90173050117047-2 chr1 131134445 131135165 + 1.90173050117047 NA intron (NM_145508, intron 2 of 2) intron (NM_145508, intron 2 of 2) 3429 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak2_29_48_-0.984177298916079_5.12262119465717_1.90173050117047 chr12 109417031 109417812 + 1.90173050117047 NA Intergenic Intergenic -35402 NR_033813 13386 Mm.157069 NM_010052 ENSMUSG00000040856 Dlk1 AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1 delta like non-canonical Notch ligand 1 protein-coding common_peak1_57_25_0.874473303236175_5.13767636975918_1.90173050117047-3 chr10 84439524 84440440 + 1.90173050117047 NA intron (NM_001004363, intron 1 of 6) intron (NM_001004363, intron 1 of 6) 489 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_58_25_0.898961367181588_5.14992040173189_1.90173050117047 chr11 59350649 59350975 + 1.90173050117047 NA Intergenic Intergenic 24841 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_57_25_0.874473303236175_5.13767636975918_1.90173050117047 chr1 40443832 40444671 + 1.90173050117047 NA intron (NM_001025602, intron 5 of 10) intron (NM_001025602, intron 5 of 10) 4622 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_57_25_0.874473303236175_5.13767636975918_1.90173050117047-2 chr9 13297179 13297837 + 1.90173050117047 NA Intergenic Intergenic 50552 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_57_25_0.874473303236175_5.13767636975918_1.90173050117047 chr7 143685167 143685771 + 1.90173050117047 NA intron (NR_131763, intron 1 of 5) intron (NR_131763, intron 1 of 5) 406 NM_001308111 79201 Mm.290780 NM_024290 ENSMUSG00000037613 Tnfrsf23 SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB tumor necrosis factor receptor superfamily, member 23 protein-coding common_peak1_57_25_0.874473303236175_5.13767636975918_1.90173050117047-4 chr3 59140163 59140981 + 1.90173050117047 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) -8110 NM_001287120 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak2_136_75_0.558288060672194_6.52707154377968_1.90127205594093 chr3 41564983 41565940 + 1.90127205594093 NA intron (NM_001130186, intron 1 of 10) CpG 581 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak1_136_75_0.558288060672194_6.52707154377968_1.90127205594093 chr17 34626914 34628551 + 1.90127205594093 NA promoter-TSS (NM_019441) promoter-TSS (NM_019441) 284 NM_001302394 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-5 chr18 80556702 80557124 + 1.90052685918624 NA Intergenic Intergenic -12367 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_31_10_1.26355344600725_4.09120834164092_1.90052685918624 chr4 155129711 155129956 + 1.90052685918624 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 43229 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-2 chr15 79063327 79063850 + 1.90052685918624 NA promoter-TSS (NM_144849) promoter-TSS (NM_144849) -729 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding common_peak2_30_10_1.21807290048873_4.06846806888166_1.90052685918624 chr19 21274050 21274306 + 1.90052685918624 NA intron (NM_009551, intron 1 of 5) intron (NM_009551, intron 1 of 5) 1900 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-10 chr6 83015073 83015350 + 1.90052685918624 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 18260 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding unique_peak2_11_26_-1.43695687614497_4.03640906409098_1.90052685918624-3 chr2 21299459 21299809 + 1.90052685918624 NA Intergenic CT-rich|Low_complexity|Low_complexity -67933 NM_001004761 241263 Mm.166647 NM_175706 ENSMUSG00000045967 Gpr158 5330427M13Rik|mKIAA1136 G protein-coupled receptor 158 protein-coding common_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624 chr11 22858183 22858648 + 1.90052685918624 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 1320 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-7 chr2 26295743 26296162 + 1.90052685918624 NA Intergenic Intergenic -1395 NM_177841 329366 Mm.77712 NM_177841 ENSMUSG00000048038 Ccdc187 4932418E24Rik coiled-coil domain containing 187 protein-coding common_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-3 chr2 52423422 52423922 + 1.90052685918624 NA intron (NM_182994, intron 1 of 5) intron (NM_182994, intron 1 of 5) 1202 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding common_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-2 chr17 75344853 75345133 + 1.90052685918624 NA intron (NM_001331234, intron 20 of 28) intron (NM_001331234, intron 20 of 28) -90912 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak2_30_10_1.21807290048873_4.06846806888166_1.90052685918624 chr8 14322718 14322920 + 1.90052685918624 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 226944 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak2_11_26_-1.43695687614497_4.03640906409098_1.90052685918624 chr1 151157787 151158272 + 1.90052685918624 NA Intergenic Intergenic 19995 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak2_11_26_-1.43695687614497_4.03640906409098_1.90052685918624-2 chr10 71960059 71960473 + 1.90052685918624 NA Intergenic Intergenic 20424 NR_003644 108950 Mm.212793 NM_175390 1700049L16Rik - hematological and neurological expressed 1-like pseudogene pseudo unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-11 chr7 130948853 130949611 + 1.90052685918624 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 13029 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak2_11_26_-1.43695687614497_4.03640906409098_1.90052685918624-4 chr7 42642214 42642608 + 1.90052685918624 NA intron (NM_001242388, intron 1 of 3) intron (NM_001242388, intron 1 of 3) 193 NM_001242388 208111 Mm.387841 NM_001034857 ENSMUSG00000074158 Zfp976 9830147E19Rik|C330019L16Rik zinc finger protein 976 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-9 chr2 33356948 33357312 + 1.90052685918624 NA intron (NM_001290570, intron 1 of 16) intron (NM_001290570, intron 1 of 16) 14364 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-4 chr16 30884070 30884736 + 1.90052685918624 NA Intergenic Intergenic 197029 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-12 chr8 128415161 128415666 + 1.90052685918624 NA intron (NM_001358959, intron 2 of 16) intron (NM_001358959, intron 2 of 16) 56172 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-8 chr2 29715199 29715553 + 1.90052685918624 NA intron (NM_001039086, intron 11 of 25) intron (NM_001039086, intron 11 of 25) -46152 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding common_peak2_11_26_-1.43695687614497_4.03640906409098_1.90052685918624 chr5 108269350 108269724 + 1.90052685918624 NA 5' UTR (NM_026106, exon 1 of 3) 5' UTR (NM_026106, exon 1 of 3) 640 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding unique_peak1_31_10_1.26355344600725_4.09120834164092_1.90052685918624-5 chr2 155357152 155357443 + 1.90052685918624 NA TTS (NR_030475) TTS (NR_030475) 127 NM_001004721 228812 Mm.5434 NM_001004721 ENSMUSG00000038383 Pigu 5430426F17Rik|BC028278|Cdc91l1 phosphatidylinositol glycan anchor biosynthesis, class U protein-coding unique_peak1_31_10_1.26355344600725_4.09120834164092_1.90052685918624-2 chr16 26646350 26646634 + 1.90052685918624 NA intron (NR_152416, intron 2 of 12) intron (NR_152416, intron 2 of 12) 64787 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-3 chr16 24295598 24296174 + 1.90052685918624 NA Intergenic Intergenic -97464 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_31_10_1.26355344600725_4.09120834164092_1.90052685918624-6 chr9 64734209 64734695 + 1.90052685918624 NA intron (NM_017382, intron 1 of 4) intron (NM_017382, intron 1 of 4) 3304 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding unique_peak1_31_10_1.26355344600725_4.09120834164092_1.90052685918624-3 chr18 75382105 75382441 + 1.90052685918624 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 14908 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624 chr14 24243707 24244285 + 1.90052685918624 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 1924 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding unique_peak1_30_10_1.21807290048873_4.06846806888166_1.90052685918624-6 chr19 56959452 56959783 + 1.90052685918624 NA intron (NM_001177797, intron 1 of 18) intron (NM_001177797, intron 1 of 18) 48958 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_31_10_1.26355344600725_4.09120834164092_1.90052685918624 chr10 6842685 6843189 + 1.90052685918624 NA intron (NM_001302796, intron 3 of 4) intron (NM_001302796, intron 3 of 4) 54361 NM_001039652 18390 Mm.438000 NM_011013 ENSMUSG00000000766 Oprm1 M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR opioid receptor, mu 1 protein-coding unique_peak1_31_10_1.26355344600725_4.09120834164092_1.90052685918624-4 chr19 15925235 15925434 + 1.90052685918624 NA promoter-TSS (NM_001205339) promoter-TSS (NM_001205339) -275 NM_177420 107272 Mm.289936 NM_177420 ENSMUSG00000024640 Psat1 D8Ertd814e|EPIP|PSA|Psat phosphoserine aminotransferase 1 protein-coding common_peak2_245_258_-0.372068097431907_7.8307742389706_1.90026235530477 chr8 126848332 126849567 + 1.90026235530477 NA promoter-TSS (NR_151740) promoter-TSS (NR_151740) -71 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_82_40_0.730771616272834_5.7229378127545_1.89550965192595 chr19 4923455 4924176 + 1.89550965192595 NA intron (NM_001360711, intron 2 of 17) intron (NM_001360711, intron 2 of 17) 4155 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak2_48_68_-0.775166313412115_5.72094130007211_1.89550965192595-2 chr9 107708828 107709903 + 1.89550965192595 NA intron (NM_011349, intron 1 of 17) CpG 1110 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak2_48_68_-0.775166313412115_5.72094130007211_1.89550965192595 chr13 43481019 43481872 + 1.89550965192595 NA promoter-TSS (NM_019930) promoter-TSS (NM_019930) -472 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_97_118_-0.568514599515133_6.61056046355038_1.8945372868274 chr4 135855552 135857218 + 1.8945372868274 NA intron (NM_001080387, intron 1 of 5) CpG 314 NM_010178 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding common_peak2_86_107_-0.599138878558747_6.45531806288409_1.89301578424131 chr19 24671837 24673150 + 1.89301578424131 NA Intergenic Intergenic -1515 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak2_56_77_-0.735403162089647_5.91770063781743_1.8928456591403 chr11 60219803 60220616 + 1.8928456591403 NA intron (NM_001358315, intron 1 of 18) intron (NM_001358315, intron 1 of 18) 418 NM_011480 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding common_peak1_93_47_0.681643823007654_5.92578441222498_1.8928456591403 chr13 48869628 48870771 + 1.8928456591403 NA intron (NM_011078, intron 1 of 21) CpG 686 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_294_303_-0.342979488513516_8.07643776918683_1.89182462144589 chr3 135438349 135440648 + 1.89182462144589 NA promoter-TSS (NR_030689) promoter-TSS (NR_030689) 372 NM_001356597 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-18 chr3 40540843 40541131 + 1.89173646618542 NA exon (NM_175515, exon 1 of 16) exon (NM_175515, exon 1 of 16) 220 NM_175515 380614 Mm.105309 NM_175515 ENSMUSG00000060798 Intu 9230116I04Rik|9430087H23Rik|Pdzd6|Pdzk6|mKIAA1284 inturned planar cell polarity protein protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-11 chr19 37908234 37908438 + 1.89173646618542 NA intron (NM_001302140, intron 48 of 53) intron (NM_001302140, intron 48 of 53) 135241 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-21 chr5 149203500 149203844 + 1.89173646618542 NA intron (NM_001359957, intron 7 of 10) intron (NM_001359957, intron 7 of 10) 19112 NM_001359957 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542 chr14 76787929 76788143 + 1.89173646618542 NA Intergenic B3A|SINE|B2 27905 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-14 chr2 168191108 168191725 + 1.89173646618542 NA intron (NR_132310, intron 9 of 11) intron (NR_132310, intron 9 of 11) 15696 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-26 chrX 100624711 100625141 + 1.89173646618542 NA intron (NM_001356384, intron 2 of 6) intron (NM_001356384, intron 2 of 6) 1015 NM_028303 72621 Mm.291607 NM_028303 ENSMUSG00000015668 Pdzd11 1810012H22Rik|2310079D11Rik|2700099C19Rik|AI854765|Pdzk11 PDZ domain containing 11 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-8 chr13 51836606 51837013 + 1.89173646618542 NA Intergenic Intergenic -9866 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-24 chr8 126610804 126611042 + 1.89173646618542 NA Intergenic Intergenic -17487 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-10 chr19 32904338 32904568 + 1.89173646618542 NA Intergenic Intergenic 146876 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-22 chr9 67831241 67831596 + 1.89173646618542 NA exon (NM_001163143, exon 2 of 2) exon (NM_001163143, exon 2 of 2) 912 NM_001163143 244911 Mm.325849 NM_001163143 ENSMUSG00000047990 C2cd4a EG244911|Fam148a C2 calcium-dependent domain containing 4A protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-3 chr1 131511928 131512310 + 1.89173646618542 NA intron (NM_001081011, intron 2 of 22) intron (NM_001081011, intron 2 of 22) 15242 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-14 chr19 41912832 41913050 + 1.89173646618542 NA intron (NM_023418, intron 1 of 3) intron (NM_023418, intron 1 of 3) 1070 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-6 chr11 116412544 116412972 + 1.89173646618542 NA exon (NM_027258, exon 1 of 19) exon (NM_027258, exon 1 of 19) 274 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-13 chr2 19037976 19038344 + 1.89173646618542 NA Intergenic Intergenic 39841 NR_024323 74629 Mm.117687 NR_024323 ENSMUSG00000026736 4930426L09Rik - RIKEN cDNA 4930426L09 gene ncRNA common_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-3 chr9 13300469 13300773 + 1.89173646618542 NA Intergenic Intergenic 53665 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-21 chr9 6554776 6555152 + 1.89173646618542 NA Intergenic Intergenic -288417 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-16 chr2 105795828 105796109 + 1.89173646618542 NA intron (NM_023876, intron 7 of 9) intron (NM_023876, intron 7 of 9) 108596 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-19 chr3 63543357 63543601 + 1.89173646618542 NA Intergenic Intergenic 104228 NR_153189 102637430 Mm.209619 NR_153189 ENSMUSG00000104336 Gm34240 - predicted gene, 34240 ncRNA common_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-2 chr5 140064860 140065136 + 1.89173646618542 NA intron (NR_152617, intron 16 of 16) intron (NR_152617, intron 16 of 16) 109920 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-22 chr8 104405854 104406130 + 1.89173646618542 NA Intergenic Intergenic -10185 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-19 chr5 109923261 109923835 + 1.89173646618542 NA Intergenic Intergenic -10015 NR_040366 100642166 NR_040366 ENSMUSG00000090015 Gm15446 - predicted gene 15446 ncRNA unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-6 chr11 35949872 35950113 + 1.89173646618542 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 30097 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-7 chr13 100107719 100107946 + 1.89173646618542 NA promoter-TSS (NM_011353) promoter-TSS (NM_011353) -187 NM_011353 20365 Mm.286177 NM_011353 ENSMUSG00000021643 Serf1 4F5|Msmac1|m4F5 small EDRK-rich factor 1 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-5 chr10 59801065 59801510 + 1.89173646618542 NA intron (NM_001359267, intron 8 of 11) intron (NM_001359267, intron 8 of 11) -78304 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-15 chr3 59121726 59122064 + 1.89173646618542 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) 8867 NM_001287124 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542 chr1 52254606 52254916 + 1.89173646618542 NA Intergenic Intergenic -21529 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-9 chr14 41423839 41424143 + 1.89173646618542 NA Intergenic Intergenic -149220 NM_001358037 100041722 Mm.425891 NM_001358037 ENSMUSG00000090440 1700049E17Rik2 - tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-25 chr9 87575399 87575763 + 1.89173646618542 NA Intergenic Intergenic 155679 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-11 chr15 62132759 62133014 + 1.89173646618542 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 86565 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-18 chr4 108327605 108327881 + 1.89173646618542 NA promoter-TSS (NM_027250) promoter-TSS (NM_027250) -409 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-8 chr14 24222254 24222661 + 1.89173646618542 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 23463 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-23 chrX 151522425 151522693 + 1.89173646618542 NA exon (NM_177201, exon 2 of 19) exon (NM_177201, exon 2 of 19) 1887 NM_001113354 320595 Mm.17156 NM_177201 ENSMUSG00000041229 Phf8 9830141C09Rik|mKIAA1111 PHD finger protein 8 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-12 chr15 81027211 81027638 + 1.89173646618542 NA intron (NM_001082536, intron 3 of 13) intron (NM_001082536, intron 3 of 13) 49659 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-4 chr1 132325383 132325826 + 1.89173646618542 NA intron (NM_028778, intron 2 of 6) intron (NM_028778, intron 2 of 6) 9479 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-15 chr2 26482505 26482805 + 1.89173646618542 NA intron (NM_008714, intron 4 of 33) intron (NM_008714, intron 4 of 33) -12536 NR_105962 102465602 NR_105962 ENSMUSG00000098548 Mir6996 Gm27531|mmu-mir-6996 microRNA 6996 ncRNA unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-3 chr1 58721847 58722080 + 1.89173646618542 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) -8589 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-17 chr3 29904264 29904485 + 1.89173646618542 NA intron (NR_110437, intron 1 of 1) intron (NR_110437, intron 1 of 1) 13357 NR_110437 102636083 NR_110437 ENSMUSG00000102590 Mannr Manr Mecom adjacent non-protein coding RNA ncRNA unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-17 chr3 152842164 152842546 + 1.89173646618542 NA intron (NM_012028, intron 3 of 4) intron (NM_012028, intron 3 of 4) 128255 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-20 chr3 103859388 103859884 + 1.89173646618542 NA promoter-TSS (NM_008979) promoter-TSS (NM_008979) -159 NR_104070 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-9 chr14 32514405 32514818 + 1.89173646618542 NA intron (NM_001081221, intron 1 of 20) intron (NM_001081221, intron 1 of 20) 1090 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-23 chr8 121237374 121237883 + 1.89173646618542 NA Intergenic Intergenic 109943 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-4 chr10 96214248 96214527 + 1.89173646618542 NA Intergenic Intergenic -11820 NR_110448 74881 Mm.410819 NR_110448 ENSMUSG00000112762 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542 chr1 38260603 38260993 + 1.89173646618542 NA intron (NM_001290814, intron 9 of 21) intron (NM_001290814, intron 9 of 21) 128715 NR_151587 329123 Mm.207123 NR_151587 ENSMUSG00000102716 Gm5099 EG329123 predicted gene 5099 ncRNA unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-10 chr15 59484654 59485006 + 1.89173646618542 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) 110632 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-7 chr11 102577143 102577520 + 1.89173646618542 NA intron (NR_040286, intron 2 of 2) intron (NR_040286, intron 2 of 2) 1788 NR_040286 100040792 Mm.277966 NR_040286 ENSMUSG00000078640 Gm11627 - predicted gene 11627 ncRNA unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-16 chr3 79899583 79900082 + 1.89173646618542 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 13902 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-2 chr1 69686311 69686840 + 1.89173646618542 NA promoter-TSS (NM_011770) promoter-TSS (NM_011770) -615 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-5 chr11 72521364 72521682 + 1.89173646618542 NA intron (NM_029932, intron 8 of 11) intron (NM_029932, intron 8 of 11) 28723 NM_029932 77577 Mm.46185 NM_029932 ENSMUSG00000020798 Spns3 9830002I17Rik spinster homolog 3 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-12 chr19 40268525 40268887 + 1.89173646618542 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 2910 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-20 chr8 47936724 47937235 + 1.89173646618542 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 53572 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542-2 chr1 40446637 40446994 + 1.89173646618542 NA 3' UTR (NM_010743, exon 8 of 8) 3' UTR (NM_010743, exon 8 of 8) 7186 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_24_7_1.36935384172555_3.68467692086278_1.89173646618542-13 chr16 91764729 91765101 + 1.89173646618542 NA intron (NM_001110276, intron 1 of 15) intron (NM_001110276, intron 1 of 15) 35544 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_25_7_1.42553817445511_3.71276908722756_1.89173646618542 chr14 20158183 20158722 + 1.89173646618542 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 23330 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-7 chr5 50059180 50059430 + 1.89173646618541 NA promoter-TSS (NM_133911) promoter-TSS (NM_133911) -309 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding common_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-2 chr3 145876722 145877110 + 1.89173646618541 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -47346 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-7 chr4 107253959 107254174 + 1.89173646618541 NA promoter-TSS (NM_029985) promoter-TSS (NM_029985) 163 NM_028394 72938 Mm.21787 NM_028394 ENSMUSG00000063172 Hspb11 2900042B11Rik|IFT25|PP25 heat shock protein family B (small), member 11 protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-11 chr9 21988834 21989351 + 1.89173646618541 NA TTS (NM_029939) TTS (NM_029939) 361 NM_023622 71746 Mm.110594 NM_023622 ENSMUSG00000040146 Rgl3 1300003D20Rik|mFLJ00153 ral guanine nucleotide dissociation stimulator-like 3 protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541 chr13 102880216 102880516 + 1.89173646618541 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 120111 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-3 chr13 23518301 23518663 + 1.89173646618541 NA Intergenic Intergenic -12562 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-8 chr6 145905055 145905369 + 1.89173646618541 NA Intergenic Intergenic -26661 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-2 chr10 19185668 19185996 + 1.89173646618541 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 18594 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-9 chr7 112269721 112270353 + 1.89173646618541 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 44201 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-8 chr7 116308402 116308788 + 1.89173646618541 NA promoter-TSS (NM_001305185) promoter-TSS (NM_001305185) -219 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-3 chr15 33590270 33590579 + 1.89173646618541 NA intron (NM_176073, intron 7 of 7) intron (NM_176073, intron 7 of 7) 63012 NR_045070 75880 Mm.396109 NR_045070 ENSMUSG00000115779 4930592A05Rik - RIKEN cDNA 4930592A05 gene ncRNA unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-5 chr2 167505555 167505775 + 1.89173646618541 NA intron (NR_153838, intron 1 of 4) intron (NR_153838, intron 1 of 4) 2222 NM_001360930 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-4 chr15 38542529 38543089 + 1.89173646618541 NA Intergenic Intergenic -23543 NM_018745 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541 chr1 90975299 90975664 + 1.89173646618541 NA Intergenic Intergenic -5861 NM_008998 19329 Mm.279780 NM_008998 ENSMUSG00000026304 Rab17 AW413472 RAB17, member RAS oncogene family protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-5 chr18 44536035 44536491 + 1.89173646618541 NA intron (NM_001085373, intron 3 of 18) intron (NM_001085373, intron 3 of 18) -125402 NR_026853 626275 Mm.427116 NR_026853 ENSMUSG00000097610 A930012L18Rik - RIKEN cDNA A930012L18 gene ncRNA unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-6 chr3 86225097 86225446 + 1.89173646618541 NA 5' UTR (NM_030695, exon 2 of 57) 5' UTR (NM_030695, exon 2 of 57) 581 NM_001077688 80877 Mm.439825 NM_030695 ENSMUSG00000028080 Lrba C80285|D3Ertd775e|Lab300|Lba LPS-responsive beige-like anchor protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-10 chr8 119810369 119810623 + 1.89173646618541 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 30083 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-4 chr17 84026469 84026942 + 1.89173646618541 NA Intergenic Intergenic 28153 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-12 chr9 110710003 110710333 + 1.89173646618541 NA intron (NM_028312, intron 5 of 6) intron (NM_028312, intron 5 of 6) 32442 NM_001083936 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-2 chr14 7872300 7872542 + 1.89173646618541 NA intron (NM_001081427, intron 3 of 45) intron (NM_001081427, intron 3 of 45) 54464 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541 chr17 80762317 80762587 + 1.89173646618541 NA Intergenic ID_B1|SINE|B4 -34427 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-6 chr19 10790071 10790347 + 1.89173646618541 NA exon (NM_001037801, exon 12 of 12) exon (NM_001037801, exon 12 of 12) 39849 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding unique_peak2_8_21_-1.5536104108181_3.68262641322825_1.89173646618541-10 chr8 27265926 27266255 + 1.89173646618541 NA intron (NM_007918, intron 1 of 2) intron (NM_007918, intron 1 of 2) 5763 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding unique_peak2_7_21_-1.72233659484626_3.59826332121417_1.89173646618541-9 chr8 4242392 4242678 + 1.89173646618541 NA intron (NM_001042557, intron 2 of 12) intron (NM_001042557, intron 2 of 12) 2430 NM_001291778 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak2_231_140_0.421251709831985_7.35017720731479_1.8916541272687 chr3 89278093 89280096 + 1.8916541272687 NA intron (NM_001162425, intron 1 of 4) intron (NM_001162425, intron 1 of 4) 551 NM_010107 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak1_530_513_-0.25866221856278_8.87629343991249_1.88943385708113 chr8 111732237 111736444 + 1.88943385708113 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) -2204 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak2_33_52_-0.918089597226747_5.26887565594983_1.8888294360187 chr3 38044706 38045462 + 1.8888294360187 NA Intergenic Intergenic 146271 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_62_28_0.835389303119262_5.2756756466872_1.8888294360187 chr15 77785213 77785780 + 1.8888294360187 NA intron (NM_022410, intron 13 of 40) intron (NM_022410, intron 13 of 40) -28486 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak1_62_28_0.835389303119262_5.2756756466872_1.8888294360187-2 chr2 178413997 178414856 + 1.8888294360187 NA promoter-TSS (NM_001085501) promoter-TSS (NM_001085501) 37 NM_001085501 228966 Mm.472736 NM_001085501 ENSMUSG00000049999 Ppp1r3d 2610024M03Rik|Gm359 protein phosphatase 1, regulatory subunit 3D protein-coding common_peak2_33_52_-0.918089597226747_5.26887565594983_1.8888294360187-2 chr8 18699610 18700113 + 1.8888294360187 NA intron (NM_007426, intron 5 of 8) intron (NM_007426, intron 5 of 8) 41701 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_62_28_0.835389303119262_5.2756756466872_1.8888294360187-3 chr3 122244568 122245221 + 1.8888294360187 NA promoter-TSS (NM_008129) promoter-TSS (NM_008129) -663 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak2_33_52_-0.918089597226747_5.26887565594983_1.8888294360187 chr15 75271336 75271944 + 1.8888294360187 NA exon (NM_008530, exon 4 of 4) exon (NM_008530, exon 4 of 4) 3219 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak1_62_28_0.835389303119262_5.2756756466872_1.8888294360187 chr14 59201137 59201828 + 1.8888294360187 NA 5' UTR (NM_001360611, exon 1 of 5) 5' UTR (NM_001360611, exon 1 of 5) 254 NM_001360610 71330 Mm.234195 NM_027764 ENSMUSG00000035469 Rcbtb1 5430409I18Rik|AW111883|CLLD7|CLLL7 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein-coding common_peak1_44_64_-0.81099966560187_5.61686798022752_1.88758293112677 chr11 62879581 62880063 + 1.88758293112677 NA intron (NM_001356521, intron 1 of 6) intron (NM_001356521, intron 1 of 6) 367 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak1_44_64_-0.81099966560187_5.61686798022752_1.88758293112677-2 chr6 134089611 134090124 + 1.88758293112677 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 54167 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_77_37_0.751391283665739_5.62362315527646_1.88758293112676 chr13 80940294 80940943 + 1.88758293112676 NA non-coding (NR_103550, exon 1 of 5) non-coding (NR_103550, exon 1 of 5) 215 NR_103550 71416 Mm.415500 NR_103550 5430425K12Rik - RIKEN cDNA 5430425K12 gene ncRNA common_peak1_77_37_0.751391283665739_5.62362315527646_1.88758293112676-2 chr14 70332780 70333635 + 1.88758293112676 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 15226 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_77_37_0.751391283665739_5.62362315527646_1.88758293112676-4 chrX 142835609 142836480 + 1.88758293112676 NA 3' UTR (NM_001199360, exon 7 of 7) 3' UTR (NM_001199360, exon 7 of 7) 97044 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA unique_peak1_77_37_0.751391283665739_5.62362315527646_1.88758293112676 chr2 158409788 158410547 + 1.88758293112676 NA intron (NM_001291137, intron 1 of 30) CpG 314 NM_001291138 228850 Mm.398185 NM_177227 ENSMUSG00000027652 Ralgapb AI507211|B230339M05Rik|p170 Ral GTPase activating protein, beta subunit (non-catalytic) protein-coding common_peak1_77_37_0.751391283665739_5.62362315527646_1.88758293112676-3 chr17 17829057 17830013 + 1.88758293112676 NA promoter-TSS (NR_029730) promoter-TSS (NR_029730) -653 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA unique_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799 chr14 120910218 120910897 + 1.88686200379799 NA promoter-TSS (NM_023579) promoter-TSS (NM_023579) -637 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding common_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799 chr4 149874246 149874956 + 1.88686200379799 NA Intergenic Intergenic 80405 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-5 chr8 24579282 24579585 + 1.88686200379799 NA Intergenic Intergenic -3100 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-4 chr7 130977353 130977845 + 1.88686200379799 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 41396 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-3 chr6 42692641 42693110 + 1.88686200379799 NA intron (NM_001355769, intron 1 of 8) intron (NM_001355769, intron 1 of 8) 225 NM_029930 77574 Mm.24652 NM_029930 ENSMUSG00000036667 Tcaf1 2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a TRPM8 channel-associated factor 1 protein-coding common_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-2 chr5 65436716 65437420 + 1.88686200379799 NA Intergenic Intergenic -1226 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak2_21_38_-1.09917183669194_4.73581630051628_1.88686200379799 chr17 75465088 75465535 + 1.88686200379799 NA promoter-TSS (NM_207246) promoter-TSS (NM_207246) -227 NM_001360103 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-5 chr9 108078927 108079313 + 1.88686200379799 NA 5' UTR (NM_001311152, exon 1 of 39) 5' UTR (NM_001311152, exon 1 of 39) 181 NM_001311152 84585 Mm.379272 NM_032543 ENSMUSG00000041528 Rnf123 BC003945|Kpc1 ring finger protein 123 protein-coding unique_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-2 chr17 72955416 72956104 + 1.88686200379799 NA Intergenic Intergenic 37455 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-3 chr3 51194001 51194500 + 1.88686200379799 NA Intergenic Intergenic -30197 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding unique_peak1_45_18_0.99492578835267_4.74539040761992_1.88686200379799-4 chr8 26888642 26888945 + 1.88686200379799 NA Intergenic Intergenic -64370 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_81_102_-0.615540959582781_6.37873004739183_1.88647548383687 chr4 151057222 151058007 + 1.88647548383687 NA intron (NM_009498, intron 1 of 4) CpG 339 NM_009498 22319 Mm.273930 NM_009498 ENSMUSG00000028955 Vamp3 D130027G05Rik|VAMP-3|ceb vesicle-associated membrane protein 3 protein-coding common_peak1_92_113_-0.581604872384505_6.54208757797249_1.88411531437979 chr1 134093282 134094141 + 1.88411531437979 NA Intergenic Intergenic -14556 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_37_56_-0.863726559619594_5.40102673435494_1.88320666182024 chr11 101008854 101009275 + 1.88320666182024 NA promoter-TSS (NM_001243051) promoter-TSS (NM_001243051) -388 NM_016920 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding common_peak2_36_56_-0.901929273107299_5.38192537761109_1.88320666182024 chr11 33839428 33840196 + 1.88320666182024 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) 3773 NM_027398 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding common_peak2_36_56_-0.901929273107299_5.38192537761109_1.88320666182024-2 chr6 145864484 145865342 + 1.88320666182024 NA intron (NM_001271768, intron 2 of 4) intron (NM_001271768, intron 2 of 4) 507 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_67_31_0.802775877763207_5.4013879388816_1.88320666182023-3 chr9 118506220 118507310 + 1.88320666182023 NA intron (NM_018748, intron 1 of 23) CpG 447 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_67_31_0.802775877763207_5.4013879388816_1.88320666182023 chr11 96973196 96973725 + 1.88320666182023 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 4228 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_67_31_0.802775877763207_5.4013879388816_1.88320666182023-2 chr19 5467372 5468446 + 1.88320666182023 NA exon (NM_009985, exon 2 of 10) exon (NM_009985, exon 2 of 10) 598 NM_009985 13041 Mm.113590 NM_009985 ENSMUSG00000024910 Ctsw lymphopain cathepsin W protein-coding unique_peak1_72_34_0.77513241862096_5.51684922625545_1.88318955216182 chr7 100907553 100908597 + 1.88318955216182 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 24086 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_72_34_0.77513241862096_5.51684922625545_1.88318955216182 chr6 30302676 30303606 + 1.88318955216182 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 1398 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak2_40_60_-0.852722790389205_5.50437594236828_1.88318955216182 chr9 111439740 111440770 + 1.88318955216182 NA intron (NM_172928, intron 1 of 4) intron (NM_172928, intron 1 of 4) 1174 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak1_118_63_0.604434927337338_6.30221746366867_1.88194491635446 chr11 65787003 65788272 + 1.88194491635446 NA intron (NM_001316368, intron 1 of 10) CpG 722 NM_009157 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding common_peak2_105_55_0.631360153639013_6.12303499887711_1.88046737755849 chr7 109579372 109580054 + 1.88046737755849 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 36855 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_66_87_-0.67787860099691_6.12049231813884_1.88046737755849 chr15 99033663 99034922 + 1.88046737755849 NA exon (NM_009448, exon 2 of 4) exon (NM_009448, exon 2 of 4) 4401 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_66_87_-0.67787860099691_6.12049231813884_1.88046737755849 chr2 181581359 181582008 + 1.88046737755849 NA TTS (NM_001164597) TTS (NM_001164597) 290 NM_026765 68556 Mm.232400 NM_026765 ENSMUSG00000089917 Uckl1 1110007H10Rik|Urkl1 uridine-cytidine kinase 1-like 1 protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-5 chr3 135485701 135486260 + 1.87883858401928 NA intron (NM_027288, intron 1 of 16) intron (NM_027288, intron 1 of 16) 369 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak1_14_29_-1.26930307083615_4.27223906019045_1.87883858401928-2 chrX 48453277 48453602 + 1.87883858401928 NA intron (NM_019680, intron 1 of 8) CpG 9693 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928 chr11 16832695 16833333 + 1.87883858401928 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 80811 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-4 chr6 128032917 128033399 + 1.87883858401928 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 110420 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak2_34_12_1.15091627440471_4.27589785534345_1.87883858401928 chr14 66279813 66280110 + 1.87883858401928 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 1091 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-7 chr4 141866894 141867678 + 1.87883858401928 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 7634 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding unique_peak2_13_29_-1.36813652224335_4.22282233448684_1.87883858401928 chr12 76306967 76307441 + 1.87883858401928 NA intron (NM_138745, intron 21 of 27) intron (NM_138745, intron 21 of 27) -17687 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding common_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-2 chr16 17405434 17405773 + 1.87883858401928 NA promoter-TSS (NM_023348) promoter-TSS (NM_023348) -397 NM_023348 67474 Mm.271992 NM_023348 ENSMUSG00000022765 Snap29 1300018G05Rik|AI891940|AU020222|BB131856|Gs32 synaptosomal-associated protein 29 protein-coding unique_peak2_14_29_-1.26930307083615_4.27223906019045_1.87883858401928 chr10 60811767 60812104 + 1.87883858401928 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 19646 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-3 chr19 58524440 58524921 + 1.87883858401928 NA intron (NM_029372, intron 3 of 8) intron (NM_029372, intron 3 of 8) 12678 NM_029372 75645 Mm.159542 NM_029372 ENSMUSG00000025090 Ccdc172 1700011F14Rik coiled-coil domain containing 172 protein-coding common_peak1_14_29_-1.26930307083615_4.27223906019045_1.87883858401928 chr4 129954153 129954585 + 1.87883858401928 NA Intergenic Intergenic -6005 NR_040647 72225 Mm.102193 NR_040647 1700003M07Rik - RIKEN cDNA 1700003M07 gene ncRNA unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-6 chr4 137507966 137508715 + 1.87883858401928 NA exon (NM_008305, exon 6 of 97) exon (NM_008305, exon 6 of 97) -29946 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-2 chr14 25491228 25491701 + 1.87883858401928 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 32279 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-4 chr2 27321411 27322022 + 1.87883858401928 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -74413 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak2_13_29_-1.36813652224335_4.22282233448684_1.87883858401928-3 chr2 156991690 156992022 + 1.87883858401928 NA promoter-TSS (NM_001355391) promoter-TSS (NM_001355391) 143 NM_001355392 29812 Mm.279256 NM_013865 ENSMUSG00000027634 Ndrg3 4833415O14Rik|AI747193|Ndr3 N-myc downstream regulated gene 3 protein-coding common_peak2_14_29_-1.26930307083615_4.27223906019045_1.87883858401928 chr5 143637472 143637939 + 1.87883858401928 NA intron (NM_011182, intron 1 of 12) intron (NM_011182, intron 1 of 12) -13536 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-10 chr9 75236524 75236854 + 1.87883858401928 NA intron (NM_001081322, intron 1 of 40) intron (NM_001081322, intron 1 of 40) 4675 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding unique_peak2_14_29_-1.26930307083615_4.27223906019045_1.87883858401928-2 chr11 88548984 88549440 + 1.87883858401928 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -70039 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928 chr14 66266499 66267009 + 1.87883858401928 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 14298 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-3 chr5 148361572 148361922 + 1.87883858401928 NA intron (NM_007513, intron 2 of 12) intron (NM_007513, intron 2 of 12) 31068 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding unique_peak2_13_29_-1.36813652224335_4.22282233448684_1.87883858401928-2 chr12 110704850 110705271 + 1.87883858401928 NA Intergenic Intergenic -8665 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-9 chr8 91133378 91133642 + 1.87883858401928 NA intron (NM_001302267, intron 1 of 10) CpG 229 NM_001358938 14339 Mm.324588 NM_010241 ENSMUSG00000031667 Aktip AL023020|Fif|Ft|Ft1|Fts thymoma viral proto-oncogene 1 interacting protein protein-coding unique_peak1_34_12_1.15091627440471_4.27589785534345_1.87883858401928-8 chr8 64670332 64670860 + 1.87883858401928 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 22513 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_472_312_0.291249082509589_8.43564338818741_1.8788015557385 chr8 70462048 70465693 + 1.8788015557385 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 13073 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_123_143_-0.506530441462774_6.91665978071092_1.87874342057603 chr1 74236589 74238035 + 1.87874342057603 NA intron (NM_001357387, intron 2 of 10) intron (NM_001357387, intron 2 of 10) 795 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_52_73_-0.76368331035909_5.82761171044941_1.87828021823437 chr12 84881636 84882864 + 1.87828021823437 NA Intergenic Intergenic -5755 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak2_53_73_-0.736906514728791_5.84100010826455_1.87828021823437 chr18 38296650 38297333 + 1.87828021823437 NA 5' UTR (NM_001164621, exon 1 of 10) 5' UTR (NM_001164621, exon 1 of 10) 186 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding common_peak1_190_112_0.462051222531829_7.0512045736811_1.87679991625188 chr12 86826106 86827826 + 1.87679991625188 NA Intergenic Intergenic 57848 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_191_112_0.46953174531033_7.05494483507035_1.87679991625188 chr16 76370953 76372958 + 1.87679991625188 NA intron (NM_173440, intron 1 of 3) intron (NM_173440, intron 1 of 3) 1094 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak2_116_137_-0.528370057441391_6.84433942805747_1.87584545853555 chr16 32002395 32003755 + 1.87584545853555 NA 5' UTR (NM_177103, exon 1 of 10) 5' UTR (NM_177103, exon 1 of 10) 212 NM_001357087 320213 Mm.152890 NM_023801 ENSMUSG00000022772 Senp5 6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3 SUMO/sentrin specific peptidase 5 protein-coding common_peak2_167_96_0.498511894685764_6.84916878953001_1.87584545853555 chr7 45018021 45019269 + 1.87584545853555 NA promoter-TSS (NM_001360132) promoter-TSS (NM_001360132) 703 NM_009101 20130 Mm.389894 NM_009101 ENSMUSG00000038387 Rras AI573426 related RAS viral (r-ras) oncogene protein-coding unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671 chr13 55570452 55570955 + 1.87578206828671 NA 5' UTR (NM_145382, exon 1 of 11) 5' UTR (NM_145382, exon 1 of 11) 417 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding common_peak1_18_35_-1.19370656732392_4.57307171778035_1.87578206828671 chr5 28071408 28071763 + 1.87578206828671 NA exon (NM_153526, exon 1 of 5) exon (NM_153526, exon 1 of 5) 173 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-4 chr6 128143045 128143458 + 1.87578206828671 NA intron (NM_175414, intron 1 of 8) intron (NM_175414, intron 1 of 8) 327 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-5 chr7 48762366 48763056 + 1.87578206828671 NA Intergenic Intergenic -26292 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak1_42_16_1.05877968895909_4.61685268572989_1.87578206828671-3 chr15 101939565 101940352 + 1.87578206828671 NA exon (NM_146063, exon 1 of 9) exon (NM_146063, exon 1 of 9) 366 NM_146063 223917 Mm.162744 NM_146063 ENSMUSG00000061397 Krt79 BC031593 keratin 79 protein-coding unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-6 chr7 112303427 112303973 + 1.87578206828671 NA exon (NM_177282, exon 4 of 20) exon (NM_177282, exon 4 of 20) -64608 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding unique_peak1_42_16_1.05877968895909_4.61685268572989_1.87578206828671-2 chr11 103311659 103312081 + 1.87578206828671 NA Intergenic PB1D10|SINE|Alu 32832 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-7 chr9 62786092 62786646 + 1.87578206828671 NA Intergenic Intergenic 25279 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding common_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-2 chr7 98544771 98545362 + 1.87578206828671 NA Intergenic Intergenic 50844 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_41_16_1.02507185476904_4.59999876863486_1.87578206828671 chr11 4637766 4638032 + 1.87578206828671 NA intron (NM_029291, intron 1 of 19) CpG 106 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding common_peak2_18_35_-1.19370656732392_4.57307171778035_1.87578206828671 chr2 25539835 25540387 + 1.87578206828671 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 6829 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding unique_peak1_42_16_1.05877968895909_4.61685268572989_1.87578206828671-4 chr16 45742404 45742904 + 1.87578206828671 NA intron (NM_172511, intron 1 of 4) intron (NM_172511, intron 1 of 4) 301 NM_001272070 213012 Mm.247453 NM_172511 ENSMUSG00000033157 Abhd10 - abhydrolase domain containing 10 protein-coding unique_peak1_42_16_1.05877968895909_4.61685268572989_1.87578206828671 chr1 87176373 87176878 + 1.87578206828671 NA Intergenic Intergenic -6689 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-2 chr14 76010396 76010844 + 1.87578206828671 NA intron (NM_026816, intron 1 of 7) CpG 245 NM_026816 68705 Mm.20415 NM_026816 ENSMUSG00000067995 Gtf2f2 1110031C13Rik|AI326315 general transcription factor IIF, polypeptide 2 protein-coding unique_peak1_42_16_1.05877968895909_4.61685268572989_1.87578206828671-5 chr4 152345029 152345795 + 1.87578206828671 NA intron (NM_001081376, intron 1 of 41) intron (NM_001081376, intron 1 of 41) 6761 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding common_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671 chr10 95337004 95337387 + 1.87578206828671 NA intron (NR_045337, intron 1 of 2) intron (NR_045337, intron 1 of 2) 919 NR_045337 69629 Mm.250542 NR_045337 ENSMUSG00000100550 2310039L15Rik A53T-syn|G2-3|PrPsynA53T|Tg(Prnp-SNCA*A53T)23Mkle RIKEN cDNA 2310039L15 gene ncRNA unique_peak1_41_16_1.02507185476904_4.59999876863486_1.87578206828671-3 chr17 35909459 35909887 + 1.87578206828671 NA TTS (NM_025878) TTS (NM_025878) 395 NM_001142745 73242 Mm.273155 NM_028476 ENSMUSG00000024426 Atat1 0610011P08Rik|2610008K08Rik|2610110G12Rik|3110080J08Rik|Mec17|TAT alpha tubulin acetyltransferase 1 protein-coding unique_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571-2 chr19 7040568 7041069 + 1.87476698508571 NA promoter-TSS (NM_016737) promoter-TSS (NM_016737) -792 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding unique_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571 chr13 28696987 28697849 + 1.87476698508571 NA intron (NR_045054, intron 3 of 7) intron (NR_045054, intron 3 of 7) 13455 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571-3 chr19 6334997 6335548 + 1.87476698508571 NA 5' UTR (NM_001168490, exon 1 of 8) 5' UTR (NM_001168490, exon 1 of 8) 233 NM_008583 17283 Mm.12917 NM_008583 ENSMUSG00000024947 Men1 AW045611 multiple endocrine neoplasia 1 protein-coding unique_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571-3 chr5 36674048 36674995 + 1.87476698508571 NA intron (NM_001081232, intron 1 of 8) intron (NM_001081232, intron 1 of 8) 21500 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571-2 chr14 57760723 57761542 + 1.87476698508571 NA Intergenic Intergenic -15009 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571-4 chr3 107895888 107896203 + 1.87476698508571 NA non-coding (NR_015459, exon 1 of 3) non-coding (NR_015459, exon 1 of 3) 168 NR_015459 329735 Mm.270500 NM_177858 ENSMUSG00000086968 4933431E20Rik - RIKEN cDNA 4933431E20 gene ncRNA common_peak2_54_23_0.913869800629783_5.04189740103605_1.87476698508571 chr2 125355065 125355653 + 1.87476698508571 NA intron (NM_007993, intron 32 of 65) intron (NM_007993, intron 32 of 65) 107844 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571-5 chr5 107088135 107088694 + 1.87476698508571 NA Intergenic Intergenic 123853 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak1_54_23_0.913869800629783_5.04189740103605_1.87476698508571 chr1 40268738 40269755 + 1.87476698508571 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 2660 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_110_131_-0.5396527556468_6.77456774153505_1.87463513715066 chr9 37656293 37657645 + 1.87463513715066 NA intron (NM_025289, intron 1 of 8) intron (NM_025289, intron 1 of 8) 343 NM_025289 21376 Mm.28689 NM_025289 ENSMUSG00000011114 Tbrg1 AA408552|AA409675|Niam|Tb-5|mFLJ00213 transforming growth factor beta regulated gene 1 protein-coding common_peak2_143_163_-0.479950715091867_7.11757664707215_1.87263926388322 chr8 94996983 94999220 + 1.87263926388322 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 13702 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_234_142_0.419336906131055_7.36953978984392_1.87240684087522 chr6 142344701 142347100 + 1.87240684087522 NA intron (NM_183165, intron 1 of 11) CpG 203 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703-6 chr6 89359470 89360162 + 1.87214134458703 NA intron (NM_008881, intron 1 of 31) intron (NM_008881, intron 1 of 31) 2797 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703-2 chr12 69374314 69374878 + 1.87214134458703 NA 3' UTR (NM_007481, exon 2 of 2) 3' UTR (NM_007481, exon 2 of 2) 2446 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703 chr9 57147526 57147943 + 1.87214134458703 NA intron (NR_151685, intron 1 of 8) intron (NR_151685, intron 1 of 8) 571 NM_028347 72774 Mm.35749 NM_028347 ENSMUSG00000032298 Neil1 2810450N13Rik|NEH1|Nei1 nei endonuclease VIII-like 1 (E. coli) protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703-4 chr15 83169138 83169578 + 1.87214134458703 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 2850 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703 chr1 164629495 164630244 + 1.87214134458703 NA Intergenic Intergenic 126562 NR_151593 102635083 Mm.98705 NR_151593 ENSMUSG00000097281 Gm26685 - predicted gene, 26685 ncRNA common_peak2_38_14_1.09948318107405_4.45663218614554_1.87214134458703-2 chr4 89508580 89508994 + 1.87214134458703 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -179411 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703-3 chr15 51709843 51710159 + 1.87214134458703 NA Intergenic Intergenic 155460 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703-5 chr6 34453805 34454381 + 1.87214134458703 NA Intergenic Intergenic -22263 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak2_38_14_1.09948318107405_4.45663218614554_1.87214134458703 chr18 34651284 34651595 + 1.87214134458703 NA exon (NM_178347, exon 2 of 16) exon (NM_178347, exon 2 of 16) 297 NM_178347 52563 Mm.196638 NM_178347 ENSMUSG00000024370 Cdc23 6030435O18|D18Ertd243e CDC23 cell division cycle 23 protein-coding unique_peak1_38_14_1.09948318107405_4.45663218614554_1.87214134458703-7 chr7 101663938 101664576 + 1.87214134458703 NA intron (NM_009191, intron 1 of 15) intron (NM_009191, intron 1 of 15) 489 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding unique_peak2_16_32_-1.22750828244876_4.43063997813407_1.87214134458702 chr13 60430849 60431616 + 1.87214134458702 NA Intergenic Intergenic -170715 NM_001285917 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak2_16_32_-1.22750828244876_4.43063997813407_1.87214134458702-2 chr7 29518809 29519207 + 1.87214134458702 NA Intergenic CpG -13548 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-83 chr6 134535580 134535854 + 1.87199725847353 NA intron (NM_008514, intron 2 of 22) intron (NM_008514, intron 2 of 22) 31196 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-10 chr1 181005324 181005603 + 1.87199725847353 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 12106 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-18 chr6 116940615 116940830 + 1.87199725847353 NA Intergenic Intergenic -223964 NM_178768 319776 Mm.133120 NM_178768 ENSMUSG00000048108 Tmem72 C230095G01Rik transmembrane protein 72 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-63 chr3 104787996 104788192 + 1.87199725847353 NA promoter-TSS (NM_001291859) promoter-TSS (NM_001291859) -940 NM_007484 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-97 chr9 52493266 52493464 + 1.87199725847353 NA Intergenic Intergenic 186072 NM_178906 330941 Mm.335160 NM_177907 ENSMUSG00000078307 AI593442 E130102D23 expressed sequence AI593442 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-8 chr13 53088764 53089020 + 1.87199725847353 NA Intergenic Intergenic -107853 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-23 chrX 75817804 75818014 + 1.87199725847353 NA intron (NM_001346519, intron 2 of 16) intron (NM_001346519, intron 2 of 16) 25112 NM_001166454 102866 Mm.28777 NM_145629 ENSMUSG00000016382 Pls3 AI115446|AL024105 plastin 3 (T-isoform) protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353 chr1 34829790 34830029 + 1.87199725847353 NA intron (NM_001160236, intron 2 of 6) RSINE1|SINE|B4 13141 NM_174997 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b Mani|mKIAA4042 family with sequence similarity 168, member B protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-68 chr4 114440219 114440419 + 1.87199725847353 NA intron (NM_001085549, intron 2 of 6) intron (NM_001085549, intron 2 of 6) 33595 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-54 chr19 20512828 20513027 + 1.87199725847353 NA intron (NM_001361506, intron 2 of 15) intron (NM_001361506, intron 2 of 15) 20212 NR_015502 320092 Mm.482524 NR_015502 ENSMUSG00000053279 E030003E18Rik 1700127G21Rik RIKEN cDNA E030003E18 gene ncRNA unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-20 chr7 81219338 81219581 + 1.87199725847353 NA intron (NM_008803, intron 1 of 21) intron (NM_008803, intron 1 of 21) 5655 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-90 chr8 46897083 46897307 + 1.87199725847353 NA Intergenic Intergenic -89692 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-94 chr8 110917741 110918045 + 1.87199725847353 NA Intergenic B2_Mm2|SINE|B2 -1972 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-6 chr1 129541121 129541324 + 1.87199725847353 NA intron (NM_172485, intron 2 of 27) intron (NM_172485, intron 2 of 27) 267918 NM_172485 210417 Mm.380518 NM_172485 ENSMUSG00000042581 Thsd7b 1700074E13Rik|B930082A18|D130067I03Rik thrombospondin, type I, domain containing 7B protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-27 chr13 15666399 15666612 + 1.87199725847353 NA intron (NM_008130, intron 10 of 14) intron (NM_008130, intron 10 of 14) 136125 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-57 chr2 168040739 168040958 + 1.87199725847353 NA Intergenic Intergenic -30255 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Ripor3 2310033K02Rik|Fam65c|Gm124 RIPOR family member 3 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-10 chr16 24729392 24729644 + 1.87199725847353 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 7663 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-5 chr10 111598567 111598769 + 1.87199725847353 NA Intergenic Intergenic -4395 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-31 chr13 42369887 42370106 + 1.87199725847353 NA Intergenic Intergenic 68520 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-41 chr16 23324339 23324579 + 1.87199725847353 NA intron (NM_001252505, intron 4 of 7) intron (NM_001252505, intron 4 of 7) 33989 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-84 chr6 146642140 146642337 + 1.87199725847353 NA promoter-TSS (NM_025315) promoter-TSS (NM_025315) -341 NM_025315 108098 Mm.26212 NM_025315 ENSMUSG00000030291 Med21 0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7 mediator complex subunit 21 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-71 chr4 139422936 139423147 + 1.87199725847353 NA intron (NM_001160319, intron 39 of 105) intron (NM_001160319, intron 39 of 105) 42382 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-20 chr11 58929616 58929914 + 1.87199725847353 NA Intergenic Intergenic 9141 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-12 chr10 27133492 27133733 + 1.87199725847353 NA intron (NM_008481, intron 34 of 63) intron (NM_008481, intron 34 of 63) -256254 NR_131034 75855 Mm.402080 NR_131034 ENSMUSG00000101636 4930579H20Rik - RIKEN cDNA 4930579H20 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-89 chr7 142477058 142477302 + 1.87199725847353 NA 5' UTR (NM_001271523, exon 1 of 11) 5' UTR (NM_001271523, exon 1 of 11) 167 NM_001271523 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-17 chr5 90860288 90860550 + 1.87199725847353 NA Intergenic Intergenic -30826 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-45 chr16 75753583 75753802 + 1.87199725847353 NA Intergenic Intergenic 13126 NR_027492 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-3 chr1 82617201 82617404 + 1.87199725847353 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 30381 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-85 chr7 34938721 34938924 + 1.87199725847353 NA intron (NM_008820, intron 4 of 14) intron (NM_008820, intron 4 of 14) 26415 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-36 chr14 79494255 79494502 + 1.87199725847353 NA intron (NM_007920, intron 1 of 8) intron (NM_007920, intron 1 of 8) -13110 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-96 chr9 50172697 50172940 + 1.87199725847353 NA Intergenic Intergenic 60364 NR_131161 71873 NR_131161 ENSMUSG00000110916 2310003N18Rik - RIKEN cDNA 2310003N18 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-70 chr4 119660511 119660814 + 1.87199725847353 NA Intergenic Intergenic -1717 NM_008191 14916 Mm.278 NM_008191 ENSMUSG00000032978 Guca2b AV066530|Gcap2|Ugn guanylate cyclase activator 2b (retina) protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-61 chr3 93000932 93001161 + 1.87199725847353 NA Intergenic Intergenic 8820 NM_001018079 69520 Mm.439968 NM_001018079 ENSMUSG00000068885 Lce3f 2310002A05Rik late cornified envelope 3F protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-4 chr1 84142450 84142683 + 1.87199725847353 NA intron (NM_001003948, intron 2 of 2) intron (NM_001003948, intron 2 of 2) 76395 NR_105771 102465181 NR_105771 ENSMUSG00000098851 Mir6353 Gm27391|mmu-mir-6353 microRNA 6353 ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-81 chr6 113625863 113626124 + 1.87199725847353 NA intron (NM_009507, intron 1 of 2) intron (NM_009507, intron 1 of 2) 1972 NM_009507 22346 Mm.29407 NM_009507 ENSMUSG00000033933 Vhl Vhlh von Hippel-Lindau tumor suppressor protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-22 chr11 74725760 74725954 + 1.87199725847353 NA Intergenic PB1D10|SINE|Alu -1473 NM_013625 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-28 chr13 27904265 27904506 + 1.87199725847353 NA Intergenic Intergenic 55043 NM_001045532 666317 NM_001045532 ENSMUSG00000062551 Prl2c1 Ghd22 Prolactin family 2, subfamily c, member 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-13 chr10 39369313 39369520 + 1.87199725847353 NA promoter-TSS (NM_001122892) promoter-TSS (NM_001122892) -383 NM_001122892 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-99 chr9 121706405 121706594 + 1.87199725847353 NA Intergenic MLT1F|LTR|ERVL-MaLR -1470 NM_001164562 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-32 chr14 31023018 31023250 + 1.87199725847353 NA exon (NM_001359856, exon 3 of 31) exon (NM_001359856, exon 3 of 31) 3429 NM_001359856 66923 Mm.27913 NM_025847 ENSMUSG00000042323 Pbrm1 2610016F04Rik|AI507524|BAF180|Pb1 polybromo 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-66 chr4 57378108 57378309 + 1.87199725847353 NA Intergenic Intergenic -13916 NR_038178 73349 Mm.393774 NR_038178 1700042G15Rik - RIKEN cDNA 1700042G15 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-79 chr6 91754096 91754363 + 1.87199725847353 NA intron (NM_009320, intron 14 of 14) intron (NM_009320, intron 14 of 14) 53164 NM_001159507 243547 Mm.333264 NM_001033353 ENSMUSG00000030098 Grip2 - glutamate receptor interacting protein 2 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-9 chr13 113591641 113591923 + 1.87199725847353 NA TTS (NM_130796) TTS (NM_130796) 26782 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-74 chr5 39599857 39600045 + 1.87199725847353 NA intron (NR_045416, intron 1 of 5) intron (NR_045416, intron 1 of 5) 3623 NR_045416 75095 Mm.332354 NR_045416 ENSMUSG00000106741 4930513D17Rik - RIKEN cDNA 4930513D17 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-52 chr18 74132841 74133090 + 1.87199725847353 NA Intergenic Intergenic -68016 NM_172632 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-18 chr10 126983289 126983537 + 1.87199725847353 NA intron (NM_001113470, intron 1 of 7) intron (NM_001113470, intron 1 of 7) 4696 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-30 chr13 38352044 38352245 + 1.87199725847353 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 6428 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-33 chr14 65071848 65072079 + 1.87199725847353 NA intron (NM_001360385, intron 2 of 5) intron (NM_001360385, intron 2 of 5) 26143 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-9 chr1 168139491 168139692 + 1.87199725847353 NA intron (NM_008783, intron 7 of 7) intron (NM_008783, intron 7 of 7) 292578 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-78 chr6 86439626 86439843 + 1.87199725847353 NA intron (NM_001243741, intron 1 of 9) intron (NM_001243741, intron 1 of 9) 1088 NM_001243741 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-43 chr16 32857140 32857377 + 1.87199725847353 NA intron (NM_172615, intron 1 of 18) intron (NM_172615, intron 1 of 18) 11108 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-98 chr9 75407088 75407303 + 1.87199725847353 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 2164 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-102 chrX 169805868 169806073 + 1.87199725847353 NA intron (NM_001290512, intron 2 of 9) intron (NM_001290512, intron 2 of 9) -22189 NM_001290504 17318 Mm.34441 NM_010797 ENSMUSG00000035299 Mid1 61B3-R|DXHXS1141|Fxy|Trim18 midline 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-11 chr10 26375652 26375923 + 1.87199725847353 NA promoter-TSS (NM_172787) promoter-TSS (NM_172787) -568 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 L3MBTL3 histone methyl-lysine binding protein protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-55 chr2 29649176 29649406 + 1.87199725847353 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 29571 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-7 chr12 13076795 13077014 + 1.87199725847353 NA Intergenic Intergenic -135068 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-19 chr7 30422955 30423184 + 1.87199725847353 NA promoter-TSS (NM_172142) promoter-TSS (NM_172142) -206 NM_172142 243910 Mm.386878 NM_172142 ENSMUSG00000036931 Nfkbid I-kappa-B-delta|IkappaBNS|ikB-delta nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-64 chr3 142317505 142317726 + 1.87199725847353 NA intron (NM_001190857, intron 2 of 7) intron (NM_001190857, intron 2 of 7) 74235 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-38 chr15 37460796 37460994 + 1.87199725847353 NA intron (NM_001359841, intron 3 of 7) intron (NM_001359841, intron 3 of 7) -1513 NM_001170868 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-42 chr16 24736052 24736288 + 1.87199725847353 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 14315 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-82 chr6 114883154 114883367 + 1.87199725847353 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 38561 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-91 chr8 67871341 67871564 + 1.87199725847353 NA intron (NM_177698, intron 8 of 14) intron (NM_177698, intron 8 of 14) 39494 NM_030263 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-29 chr13 34215089 34215289 + 1.87199725847353 NA intron (NM_001033167, intron 4 of 10) intron (NM_001033167, intron 4 of 10) 52225 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-23 chr11 88621751 88622049 + 1.87199725847353 NA intron (NR_131025, intron 2 of 2) intron (NR_131025, intron 2 of 2) 2649 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-14 chr10 75222118 75222319 + 1.87199725847353 NA intron (NM_001145826, intron 2 of 18) intron (NM_001145826, intron 2 of 18) 9828 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-11 chr16 45334985 45335254 + 1.87199725847353 NA Intergenic Intergenic 73934 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-101 chrX 163953069 163953323 + 1.87199725847353 NA 3' UTR (NM_178794, exon 5 of 5) 3' UTR (NM_178794, exon 5 of 5) 5470 NM_009453 22184 Mm.426178 NM_009453 ENSMUSG00000031370 Zrsr2 35kDa|5031411E02Rik|A230052C13Rik|C77286|U2af1-rs2|URP zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-58 chr3 5577148 5577337 + 1.87199725847353 NA promoter-TSS (NM_001163301) promoter-TSS (NM_001163301) -994 NM_008994 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-24 chr11 118318905 118319113 + 1.87199725847353 NA intron (NM_011594, intron 2 of 4) intron (NM_011594, intron 2 of 4) 23525 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-34 chr14 69695725 69695919 + 1.87199725847353 NA TTS (NM_033325) TTS (NM_033325) 3574 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-77 chr5 138162207 138162396 + 1.87199725847353 NA intron (NM_012002, intron 4 of 9) intron (NM_012002, intron 4 of 9) 1199 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-69 chr4 117130581 117130799 + 1.87199725847353 NA intron (NM_001313916, intron 10 of 14) intron (NM_001313916, intron 10 of 14) 3273 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo like kinase 3 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-14 chr2 25978900 25979134 + 1.87199725847353 NA intron (NM_001276360, intron 1 of 17) intron (NM_001276360, intron 1 of 17) 4265 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-72 chr5 8423368 8423689 + 1.87199725847353 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 690 NM_178766 319653 Mm.146262 NM_178766 ENSMUSG00000054099 Slc25a40 B230315F11Rik solute carrier family 25, member 40 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-88 chr7 89426557 89426752 + 1.87199725847353 NA intron (NR_102276, intron 1 of 1) intron (NR_102276, intron 1 of 1) 348 NR_102276 101521 Mm.26902 NR_102276 ENSMUSG00000109311 AI314278 - expressed sequence AI314278 ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-100 chrX 73494967 73495167 + 1.87199725847353 NA 3' UTR (NM_007542, exon 8 of 8) 3' UTR (NM_007542, exon 8 of 8) -8019 NM_001310537 320707 Mm.210095 NM_177236 ENSMUSG00000031376 Atp2b3 6430519O13Rik|Pmca3 ATPase, Ca++ transporting, plasma membrane 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-76 chr5 99973512 99973784 + 1.87199725847353 NA intron (NM_001077266, intron 1 of 7) intron (NM_001077266, intron 1 of 7) 5290 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-4 chr10 60206515 60206764 + 1.87199725847353 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 12621 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-15 chr10 78669095 78669313 + 1.87199725847353 NA Intergenic Intergenic 49089 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-46 chr17 37070565 37070783 + 1.87199725847353 NA exon (NM_019439, exon 20 of 23) exon (NM_019439, exon 20 of 23) 15562 NM_146477 258469 Mm.271392 NM_146477 ENSMUSG00000056600 Olfr90 MOR256-21|bM573K1.2 olfactory receptor 90 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-2 chr1 62778631 62778899 + 1.87199725847353 NA intron (NM_001077404, intron 12 of 16) intron (NM_001077404, intron 12 of 16) 15967 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-35 chr14 76630715 76630911 + 1.87199725847353 NA Intergenic Intergenic -46755 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-48 chr17 69220642 69220855 + 1.87199725847353 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 56458 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-62 chr3 97938595 97938825 + 1.87199725847353 NA intron (NM_001033779, intron 1 of 1) B1_Mus1|SINE|Alu 8537 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-16 chr10 80109244 80109456 + 1.87199725847353 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -6453 NM_001301853 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-67 chr4 62635975 62636191 + 1.87199725847353 NA intron (NM_019492, intron 16 of 19) intron (NM_019492, intron 16 of 19) 16411 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-21 chr11 68863524 68863760 + 1.87199725847353 NA Intergenic Intergenic -10511 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-25 chr12 50544150 50544339 + 1.87199725847353 NA intron (NM_008858, intron 1 of 18) intron (NM_008858, intron 1 of 18) 104979 NM_008858 18760 Mm.133719 NM_008858 ENSMUSG00000002688 Prkd1 PKD|PKD1|Pkcm|Prkcm protein kinase D1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-50 chr17 84620278 84620477 + 1.87199725847353 NA 3' UTR (NM_177606, exon 30 of 30) 3' UTR (NM_177606, exon 30 of 30) -6122 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-40 chr16 15194228 15194472 + 1.87199725847353 NA Intergenic Intergenic 287704 NM_025769 66793 Mm.100270 NM_025769 ENSMUSG00000068617 Efcab1 4930449A16Rik|5430404L10Rik EF-hand calcium binding domain 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-47 chr17 42933988 42934202 + 1.87199725847353 NA Intergenic Intergenic -57671 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-53 chr19 8646295 8646505 + 1.87199725847353 NA Intergenic Intergenic 16935 NR_045314 402757 Mm.150255 NR_045314 9830166K06Rik - RIKEN cDNA 9830166K06 gene ncRNA unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353 chr1 62551261 62551491 + 1.87199725847353 NA intron (NM_001081050, intron 21 of 22) intron (NM_001081050, intron 21 of 22) -151941 NM_001077406 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-7 chr1 153868391 153868683 + 1.87199725847353 NA Intergenic LTR33|LTR|ERVL -5808 NM_001008426 433365 Mm.229362 NM_001008426 ENSMUSG00000043282 Teddm1b EG433365|Gm5531 transmembrane epididymal protein 1B protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-80 chr6 99130583 99130792 + 1.87199725847353 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -102389 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-13 chr19 27443154 27443379 + 1.87199725847353 NA Intergenic Intergenic 13229 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-93 chr8 95650997 95651252 + 1.87199725847353 NA Intergenic Intergenic 17565 NM_030198 78833 Mm.35546 NM_030198 ENSMUSG00000031669 Gins3 2700085M18Rik|AI616142 GINS complex subunit 3 (Psf3 homolog) protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-21 chr8 113978478 113978686 + 1.87199725847353 NA Intergenic Intergenic -129743 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-6 chr11 102960977 102961208 + 1.87199725847353 NA intron (NR_037963, intron 2 of 2) intron (NR_037963, intron 2 of 2) 3062 NR_037963 69739 Mm.276539 NR_037963 ENSMUSG00000085338 2410004I01Rik - RIKEN cDNA 2410004I01 gene ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-95 chr9 32712565 32712758 + 1.87199725847353 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 16619 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-17 chr10 121521818 121522028 + 1.87199725847353 NA Intergenic Intergenic -45673 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-75 chr5 57769114 57769301 + 1.87199725847353 NA intron (NM_001310608, intron 1 of 3) intron (NM_001310608, intron 1 of 3) 51126 NM_018764 54216 Mm.332387 NM_018764 ENSMUSG00000029108 Pcdh7 - protocadherin 7 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-44 chr16 37011483 37011725 + 1.87199725847353 NA promoter-TSS (NM_001159369) promoter-TSS (NM_001159369) -182 NM_029977 77782 Mm.259114 NM_029977 ENSMUSG00000034206 Polq A430110D14Rik polymerase (DNA directed), theta protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-8 chr1 158607736 158607953 + 1.87199725847353 NA intron (NM_007495, intron 14 of 22) intron (NM_007495, intron 14 of 22) 102219 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-16 chr3 127783359 127783562 + 1.87199725847353 NA Intergenic Intergenic -2933 NM_027808 71481 Mm.158704 NM_027808 ENSMUSG00000028028 Alpk1 8430410J10Rik|LAK alpha-kinase 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-56 chr2 59757064 59757283 + 1.87199725847353 NA intron (NM_001290659, intron 3 of 25) intron (NM_001290659, intron 3 of 25) 110404 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-92 chr8 84204537 84204908 + 1.87199725847353 NA Intergenic B2_Mm1a|SINE|B2 -3796 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-2 chr10 18964542 18964786 + 1.87199725847353 NA Intergenic Intergenic 47299 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-37 chr15 10559508 10559710 + 1.87199725847353 NA promoter-TSS (NM_029430) promoter-TSS (NM_029430) -941 NM_029430 75777 Mm.48812 NM_029430 ENSMUSG00000022249 Ttc23l 4930401A09Rik tetratricopeptide repeat domain 23-like protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-39 chr15 53310093 53310399 + 1.87199725847353 NA intron (NM_010162, intron 1 of 10) B4A|SINE|B4 35937 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-26 chr12 77138467 77138672 + 1.87199725847353 NA Intergenic Intergenic -99535 NM_001252614 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-59 chr3 87915762 87915976 + 1.87199725847353 NA 3' UTR (NM_001331052, exon 6 of 6) 3' UTR (NM_001331052, exon 6 of 6) -3675 NM_026591 67707 Mm.393802 NM_026591 ENSMUSG00000019710 Mrpl24 2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670 mitochondrial ribosomal protein L24 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-5 chr1 91492646 91492879 + 1.87199725847353 NA Intergenic Intergenic -1906 NM_028718 74019 Mm.318430 NM_028718 ENSMUSG00000034292 Traf3ip1 3930402D05Rik|AU041749|MIP-T3 TRAF3 interacting protein 1 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-12 chr16 55841815 55842041 + 1.87199725847353 NA 3' UTR (NM_001134457, exon 6 of 6) 3' UTR (NM_001134457, exon 6 of 6) -3287 NM_001159395 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-86 chr7 64247975 64248167 + 1.87199725847353 NA intron (NM_001039104, intron 25 of 26) intron (NM_001039104, intron 25 of 26) 2028 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-22 chrX 18873717 18873971 + 1.87199725847353 NA Intergenic Intergenic 272544 NR_029806 723827 NR_029806 ENSMUSG00000065422 Mir221 Mirn221|mir-221|mmu-mir-221 microRNA 221 ncRNA unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-65 chr4 19574595 19574831 + 1.87199725847353 NA promoter-TSS (NM_025476) promoter-TSS (NM_025476) -353 NM_025476 66302 Mm.440686 NM_025476 ENSMUSG00000028229 Rmdn1 Fam82b|RMD-1 regulator of microtubule dynamics 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-87 chr7 84404083 84404275 + 1.87199725847353 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 5859 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-49 chr17 75235986 75236272 + 1.87199725847353 NA intron (NM_019919, intron 7 of 33) intron (NM_019919, intron 7 of 33) 57348 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-19 chr11 8691880 8692116 + 1.87199725847353 NA Intergenic Intergenic -27463 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-15 chr2 113495543 113495797 + 1.87199725847353 NA intron (NM_001285459, intron 3 of 16) intron (NM_001285459, intron 3 of 16) 54606 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-60 chr3 92249333 92249573 + 1.87199725847353 NA Intergenic Intergenic -1194 NM_001164787 100303744 Mm.429851 NM_001164787 ENSMUSG00000068893 Sprr2a2 - small proline-rich protein 2A2 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-51 chr18 65748889 65749192 + 1.87199725847353 NA intron (NM_177028, intron 13 of 14) intron (NM_177028, intron 13 of 14) 50772 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak2_1_9_-2.57072311194983_2.03656653891244_1.87199725847353-3 chr10 52275409 52275608 + 1.87199725847353 NA intron (NM_025705, intron 2 of 10) intron (NM_025705, intron 2 of 10) 41889 NM_025705 66686 Mm.62982 NM_025705 ENSMUSG00000019891 Dcbld1 4631413K11Rik discoidin, CUB and LCCL domain containing 1 protein-coding unique_peak1_10_2_1.60832286102239_2.38912393123235_1.87199725847353-73 chr5 35967105 35967348 + 1.87199725847353 NA intron (NM_027373, intron 8 of 16) intron (NM_027373, intron 8 of 16) 73907 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding common_peak1_125_68_0.577790861895422_6.39741988772588_1.86766458580328 chr11 5837121 5838085 + 1.86766458580328 NA exon (NM_017401, exon 1 of 11) exon (NM_017401, exon 1 of 11) 413 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak2_138_77_0.541574832520838_6.55618963512267_1.86732491380737-2 chr7 144038550 144039252 + 1.86732491380737 NA Intergenic Intergenic 29647 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_138_77_0.541574832520838_6.55618963512267_1.86732491380737 chr4 32404488 32406217 + 1.86732491380737 NA Intergenic Intergenic -12083 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_401_261_0.314855659183904_8.1908508311294_1.86718205551064 chr6 146887884 146891542 + 1.86718205551064 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 1219 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_94_48_0.667055529610573_5.9482376089205_1.86707916839833 chr17 35700702 35701337 + 1.86707916839833 NA promoter-TSS (NM_001198833) promoter-TSS (NM_001198833) -429 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_94_48_0.667055529610573_5.9482376089205_1.86707916839833-3 chr19 60954494 60955755 + 1.86707916839833 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 65375 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_94_48_0.667055529610573_5.9482376089205_1.86707916839833 chr14 54464193 54465068 + 1.86707916839833 NA intron (NM_022993, intron 1 of 6) CpG 483 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding common_peak1_57_78_-0.728867726799836_5.93934688477719_1.86707916839833 chr1 74391839 74392388 + 1.86707916839833 NA intron (NM_153088, intron 1 of 6) CpG 504 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak1_94_48_0.667055529610573_5.9482376089205_1.86707916839833-4 chr8 61310954 61311806 + 1.86707916839833 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -22508 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_94_48_0.667055529610573_5.9482376089205_1.86707916839833-2 chr16 4641943 4643151 + 1.86707916839833 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 2602 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding common_peak2_243_149_0.404227419660508_7.43093240032613_1.86640779227967 chr4 59805863 59807571 + 1.86640779227967 NA intron (NM_172468, intron 1 of 8) intron (NM_172468, intron 1 of 8) 1067 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak2_49_69_-0.766984154792658_5.74579093954864_1.86585953767694 chr15 81925616 81926115 + 1.86585953767694 NA exon (NM_030229, exon 1 of 6) exon (NM_030229, exon 1 of 6) 348 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_83_41_0.713162293667375_5.74889856961245_1.86585953767694 chr2 31470173 31471361 + 1.86585953767694 NA intron (NR_002687, intron 1 of 15) intron (NR_002687, intron 1 of 15) 459 NR_002687 432466 Mm.333323 NR_002687 ENSMUSG00000046687 Gm5424 EG432466 argininosuccinate synthase pseudogene pseudo common_peak2_137_157_-0.487146823726638_7.06020733631378_1.86502204388836 chr7 84528500 84530087 + 1.86502204388836 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 339 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak1_118_138_-0.51450614538617_6.86168800003042_1.86230349003795 chr5 103692522 103693514 + 1.86230349003795 NA Intergenic Intergenic -37286 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding common_peak1_100_52_0.641577444694215_6.04870917691031_1.86067619969933 chr13 95374903 95375843 + 1.86067619969933 NA promoter-TSS (NM_025630) promoter-TSS (NM_025630) -16 NM_025630 66549 Mm.36785 NM_025630 ENSMUSG00000021681 Aggf1 2010009L17Rik|2310029P06Rik|AW112072|Peg3|VG5Q angiogenic factor with G patch and FHA domains 1 protein-coding common_peak1_101_52_0.655691025427463_6.05576596727693_1.86067619969933 chr6 67101645 67102995 + 1.86067619969933 NA Intergenic Intergenic -64913 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding common_peak2_112_132_-0.524959733840938_6.79280256858072_1.86043195250657 chr16 18811734 18812882 + 1.86043195250657 NA promoter-TSS (NM_009862) promoter-TSS (NM_009862) 14 NM_011672 22230 Mm.237594 NM_011672 ENSMUSG00000005262 Ufd1 Ufd1l ubiquitin recognition factor in ER-associated degradation 1 protein-coding common_peak2_159_178_-0.455283773012314_7.2561738907581_1.85942865544841 chr9 63725520 63727083 + 1.85942865544841 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 31693 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_72_93_-0.650173416111711_6.22950214362178_1.85881965569508 chr18 64887430 64888745 + 1.85881965569508 NA exon (NM_001114386, exon 1 of 31) exon (NM_001114386, exon 1 of 31) 331 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_106_56_0.619276022864417_6.14252802559695_1.85815517112339 chr1 132417531 132418742 + 1.85815517112339 NA intron (NM_172516, intron 1 of 12) intron (NM_172516, intron 1 of 12) 683 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding common_peak1_107_56_0.632601857162173_6.14919094274583_1.85815517112339 chr9 99139140 99140149 + 1.85815517112339 NA intron (NM_029094, intron 1 of 23) CpG 567 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak1_106_56_0.619276022864417_6.14252802559695_1.85815517112339-2 chr11 59847652 59848734 + 1.85815517112339 NA exon (NM_134029, exon 1 of 5) exon (NM_134029, exon 1 of 5) 120 NM_134029 103850 Mm.41761 NM_134029 ENSMUSG00000032615 Nt5m 2010013E09Rik|AI846937|dNT-2 5',3'-nucleotidase, mitochondrial protein-coding common_peak2_31_49_-0.920871125130173_5.18342062720964_1.85759988472352 chr1 40225227 40225842 + 1.85759988472352 NA intron (NM_008362, intron 1 of 10) intron (NM_008362, intron 1 of 10) 454 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_30_49_-0.966351670648698_5.16068035445038_1.85759988472352-2 chr3 121662813 121663438 + 1.85759988472352 NA Intergenic Intergenic -7638 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_30_49_-0.966351670648698_5.16068035445038_1.85759988472352 chr1 134091510 134092207 + 1.85759988472352 NA Intergenic Intergenic -12703 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_31_49_-0.920871125130173_5.18342062720964_1.85759988472352-3 chr2 75612722 75613490 + 1.85759988472352 NA Intergenic Intergenic -46153 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak1_30_49_-0.966351670648698_5.16068035445038_1.85759988472352 chr1 31164910 31165319 + 1.85759988472352 NA intron (NR_033445, intron 2 of 2) intron (NR_033445, intron 2 of 2) -11321 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding common_peak2_31_49_-0.920871125130173_5.18342062720964_1.85759988472352-4 chr2 118540424 118541270 + 1.85759988472352 NA intron (NM_001331221, intron 3 of 3) intron (NM_001331221, intron 3 of 3) 3740 NR_138603 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak2_31_49_-0.920871125130173_5.18342062720964_1.85759988472352-2 chr10 17110585 17110995 + 1.85759988472352 NA Intergenic Intergenic -15008 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_59_26_0.868590063462417_5.18918253389468_1.85759988472351-2 chr9 61913908 61914426 + 1.85759988472351 NA intron (NM_018853, intron 1 of 2) intron (NM_018853, intron 1 of 2) 343 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_59_26_0.868590063462417_5.18918253389468_1.85759988472351 chr15 98609457 98609892 + 1.85759988472351 NA Intergenic CpG -2041 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding unique_peak1_59_26_0.868590063462417_5.18918253389468_1.85759988472351 chr14 121713522 121714451 + 1.85759988472351 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -15569 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_59_26_0.868590063462417_5.18918253389468_1.85759988472351-2 chr17 30611892 30612545 + 1.85759988472351 NA intron (NM_001113560, intron 1 of 6) intron (NM_001113560, intron 1 of 6) 441 NM_025374 109801 Mm.261984 NM_025374 ENSMUSG00000024026 Glo1 0610009E22Rik|1110008E19Rik|2510049H23Rik|AW550643|GLY1|Glo-1|Glo-1r|Glo-1s|Glo1-r|Glo1-s|Qglo glyoxalase 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-18 chr12 9230107 9230474 + 1.85743853830261 NA Intergenic Intergenic 200293 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-72 chr8 110812327 110812652 + 1.85743853830261 NA intron (NM_133953, intron 23 of 25) intron (NM_133953, intron 23 of 25) -6565 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-56 chr2 131933465 131933661 + 1.85743853830261 NA intron (NM_001278256, intron 3 of 3) intron (NM_001278256, intron 3 of 3) -17298 NM_001278257 26434 Mm.180750 NM_023043 ENSMUSG00000027338 Prnd AI450264|Dpl|PrPLP|doppel prion like protein doppel protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-6 chr10 76262218 76262427 + 1.85743853830261 NA TTS (NM_001081419) TTS (NM_001081419) 8486 NM_009115 20203 Mm.235998 NM_009115 ENSMUSG00000033208 S100b AI850290|Bpb S100 protein, beta polypeptide, neural protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-6 chr10 34185563 34185831 + 1.85743853830261 NA intron (NM_172508, intron 1 of 5) intron (NM_172508, intron 1 of 5) 21854 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-64 chr5 100625019 100625222 + 1.85743853830261 NA Intergenic Intergenic 49136 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-49 chr2 31473260 31473552 + 1.85743853830261 NA intron (NR_002687, intron 1 of 15) intron (NR_002687, intron 1 of 15) 3098 NR_002687 432466 Mm.333323 NR_002687 ENSMUSG00000046687 Gm5424 EG432466 argininosuccinate synthase pseudogene pseudo unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-81 chr6 86886412 86886723 + 1.85743853830261 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 37050 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-11 chr11 58017798 58017997 + 1.85743853830261 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 8833 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-27 chr14 65969586 65969773 + 1.85743853830261 NA intron (NM_013492, intron 1 of 8) intron (NM_013492, intron 1 of 8) 1196 NM_013492 12759 Mm.200608 NM_013492 ENSMUSG00000022037 Clu AI893575|ApoJ|Cli|D14Ucla3|SP-40|Sgp-2|Sgp2|Sugp-2 clusterin protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-97 chr9 57425613 57425805 + 1.85743853830261 NA intron (NR_152145, intron 3 of 6) B1_Mur1|SINE|Alu 14027 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-50 chr2 141263771 141264099 + 1.85743853830261 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -592459 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-28 chr5 113630845 113631088 + 1.85743853830261 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 12637 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-16 chr13 110738194 110738547 + 1.85743853830261 NA Intergenic MTD|LTR|ERVL-MaLR -165129 NR_131193 75139 Mm.490931 NR_131193 ENSMUSG00000114472 Gm38397 - predicted gene, 38397 ncRNA unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-42 chr9 53736095 53736314 + 1.85743853830261 NA Intergenic Intergenic -29972 NM_175562 270160 Mm.290285 NM_175562 ENSMUSG00000055069 Rab39 C230094F14Rik|Rab39a RAB39, member RAS oncogene family protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-61 chr3 27193213 27193424 + 1.85743853830261 NA intron (NM_178772, intron 1 of 4) intron (NM_178772, intron 1 of 4) 10314 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-85 chr7 110525041 110525233 + 1.85743853830261 NA intron (NM_177324, intron 2 of 40) intron (NM_177324, intron 2 of 40) 89783 NM_177324 319934 Mm.102970 NM_177324 ENSMUSG00000038371 Sbf2 4833411B01Rik|AA414977|AI317167|B430219L04Rik|Mtmr13|mMTMH1 SET binding factor 2 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-2 chr1 157079903 157080121 + 1.85743853830261 NA Intergenic Intergenic 28638 NM_001305059 73435 Mm.116705 NM_028540 ENSMUSG00000026592 Tex35 1700057K13Rik testis expressed 35 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-54 chr3 120176698 120176971 + 1.85743853830261 NA Intergenic Intergenic -393446 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-20 chr12 86128189 86128422 + 1.85743853830261 NA intron (NM_029601, intron 3 of 7) intron (NM_029601, intron 3 of 7) -41036 NR_046081 328136 Mm.312050 NR_046081 ENSMUSG00000097543 Gm805 - predicted gene 805 ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-41 chr18 56978046 56978267 + 1.85743853830261 NA Intergenic Intergenic -2777 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-93 chr8 110841513 110841720 + 1.85743853830261 NA intron (NM_133953, intron 4 of 25) intron (NM_133953, intron 4 of 25) -3018 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-35 chr16 18411355 18411607 + 1.85743853830261 NA intron (NM_001111062, intron 3 of 5) intron (NM_001111062, intron 3 of 5) 2013 NM_001111063 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-25 chr13 64381891 64382177 + 1.85743853830261 NA Intergenic Intergenic -11514 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-36 chr6 146792951 146793165 + 1.85743853830261 NA Intergenic Intergenic -12472 NM_001289680 272322 Mm.333500 NM_172309 ENSMUSG00000040187 Arntl2 4632430A05Rik|BMAL2|CLIF|MOP9|bHLHe6 aryl hydrocarbon receptor nuclear translocator-like 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-48 chr2 136914573 136914850 + 1.85743853830261 NA intron (NM_001355671, intron 2 of 6) intron (NM_001355671, intron 2 of 6) 15360 NM_001038641 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-17 chr12 105546046 105546384 + 1.85743853830261 NA Intergenic Intergenic -16957 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-59 chr2 163659141 163659359 + 1.85743853830261 NA intron (NM_001039390, intron 2 of 4) intron (NM_001039390, intron 2 of 4) 792 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-2 chr3 122409633 122409838 + 1.85743853830261 NA Intergenic Intergenic -10022 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-89 chr8 84710851 84711159 + 1.85743853830261 NA intron (NM_001081982, intron 9 of 9) RSINE1|SINE|B4 9548 NM_008535 17095 Mm.4925 NM_008535 ENSMUSG00000034041 Lyl1 Lyl-1|bHLHa18 lymphoblastomic leukemia 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-99 chr9 108684147 108684342 + 1.85743853830261 NA 3' UTR (NM_020520, exon 9 of 9) 3' UTR (NM_020520, exon 9 of 9) -7899 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-38 chr8 13340211 13340418 + 1.85743853830261 NA intron (NM_001291768, intron 2 of 10) intron (NM_001291768, intron 2 of 10) 1510 NM_009361 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-87 chr8 68105276 68105519 + 1.85743853830261 NA Intergenic Intergenic -130823 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-21 chr12 111666151 111666454 + 1.85743853830261 NA Intergenic ID_B1|SINE|B4 6036 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-27 chr5 24426260 24426509 + 1.85743853830261 NA intron (NM_009207, intron 1 of 22) intron (NM_009207, intron 1 of 22) -1137 NM_001253892 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-36 chr15 97797974 97798196 + 1.85743853830261 NA intron (NM_001204280, intron 16 of 21) intron (NM_001204280, intron 16 of 21) 13720 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-34 chr16 17643233 17643501 + 1.85743853830261 NA 3' UTR (NM_029945, exon 20 of 20) 3' UTR (NM_029945, exon 20 of 20) -3103 NM_001166164 72315 Mm.297777 NM_001166164 ENSMUSG00000041617 Ccdc74a 2310015A05Rik coiled-coil domain containing 74A protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-3 chr1 127219996 127220297 + 1.85743853830261 NA intron (NM_145128, intron 1 of 17) AT_rich|Low_complexity|Low_complexity 15160 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-14 chr11 119991038 119991355 + 1.85743853830261 NA intron (NM_001037754, intron 6 of 13) intron (NM_001037754, intron 6 of 13) -23571 NR_037225 100526518 NR_037225 ENSMUSG00000105524 Mir3065 mir-3065|mmu-mir-3065 microRNA 3065 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-86 chr8 34371206 34371492 + 1.85743853830261 NA Intergenic Intergenic -204637 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-8 chr11 116807732 116807979 + 1.85743853830261 NA 3' UTR (NM_001347633, exon 5 of 5) 3' UTR (NM_001347633, exon 5 of 5) 20191 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-30 chr15 39553479 39553847 + 1.85743853830261 NA intron (NM_053271, intron 19 of 26) intron (NM_053271, intron 19 of 26) -105848 NM_001256384 116838 Mm.309296 NM_053271 ENSMUSG00000037386 Rims2 2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751 regulating synaptic membrane exocytosis 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-94 chr8 123330929 123331261 + 1.85743853830261 NA Intergenic MTB|LTR|ERVL-MaLR -1618 NM_172287 234857 Mm.150200 NM_172287 ENSMUSG00000010154 Spire2 BC026502|Spir-2|Spir2 spire type actin nucleation factor 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-53 chr2 119028939 119029139 + 1.85743853830261 NA intron (NM_199310, intron 1 of 3) intron (NM_199310, intron 1 of 3) 354 NM_199310 269336 Mm.292465 NM_199310 ENSMUSG00000039983 Ccdc32 Gm631 coiled-coil domain containing 32 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-79 chrX 159254823 159255081 + 1.85743853830261 NA promoter-TSS (NM_148945) promoter-TSS (NM_148945) -830 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-10 chr12 17377042 17377283 + 1.85743853830261 NA intron (NM_001008421, intron 12 of 20) intron (NM_001008421, intron 12 of 20) 21770 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-14 chr11 78175385 78175655 + 1.85743853830261 NA intron (NM_080849, intron 1 of 14) ID4_|SINE|ID 1146 NM_080849 140859 Mm.23788 NM_080849 ENSMUSG00000017405 Nek8 4632401F23Rik|b2b1449Clo|jck NIMA (never in mitosis gene a)-related expressed kinase 8 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-41 chr9 50729377 50729576 + 1.85743853830261 NA intron (NM_001311069, intron 1 of 19) MIRc|SINE|MIR -1492 NM_178118 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-73 chr5 21478372 21478630 + 1.85743853830261 NA intron (NM_177869, intron 7 of 7) intron (NM_177869, intron 7 of 7) 53598 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-47 chr19 5060356 5060574 + 1.85743853830261 NA Intergenic Intergenic -7613 NM_054042 70445 Mm.29597 NM_054042 ENSMUSG00000056481 Cd248 2610111G01Rik|AI842296|Cd164l1|Tem1 CD248 antigen, endosialin protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-34 chr6 121081358 121081567 + 1.85743853830261 NA non-coding (NR_138097, exon 1 of 19) non-coding (NR_138097, exon 1 of 19) 165 NM_153396 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-9 chr12 17223732 17223958 + 1.85743853830261 NA Intergenic Intergenic -42750 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-40 chr9 6554403 6554694 + 1.85743853830261 NA Intergenic Intergenic -288001 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-11 chr11 35950807 35950997 + 1.85743853830261 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 29187 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-39 chr8 128217582 128217866 + 1.85743853830261 NA Intergenic ID_B1|SINE|B4 60501 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-21 chr13 38515883 38516213 + 1.85743853830261 NA intron (NM_001289599, intron 3 of 9) intron (NM_001289599, intron 3 of 9) 11866 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-20 chr15 101189342 101189644 + 1.85743853830261 NA intron (NM_007395, intron 1 of 8) intron (NM_007395, intron 1 of 8) -4376 NR_105927 102466774 NR_105927 ENSMUSG00000106563 Mir6962 mmu-mir-6962 microRNA 6962 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-54 chr2 119315732 119316066 + 1.85743853830261 NA Intergenic Intergenic -9885 NM_019454 54485 Mm.143719 NM_019454 ENSMUSG00000027314 Dll4 Delta4 delta like canonical Notch ligand 4 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-43 chr2 13437638 13437825 + 1.85743853830261 NA intron (NM_001081084, intron 22 of 66) intron (NM_001081084, intron 22 of 66) 54145 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-69 chr4 86675954 86676271 + 1.85743853830261 NA Intergenic Intergenic -6053 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-66 chr6 131298829 131299068 + 1.85743853830261 NA TTS (NM_172891) TTS (NM_172891) -5704 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-95 chr8 124283462 124283669 + 1.85743853830261 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 52171 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-43 chr18 4738163 4738369 + 1.85743853830261 NA Intergenic Intergenic -74220 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261 chr1 38438476 38438698 + 1.85743853830261 NA intron (NM_001290814, intron 4 of 21) intron (NM_001290814, intron 4 of 21) 188657 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-13 chr11 77685387 77685604 + 1.85743853830261 NA promoter-TSS (NM_001024205) promoter-TSS (NM_001024205) -644 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-22 chr18 68053518 68053774 + 1.85743853830261 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 120473 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-32 chr15 32446406 32446636 + 1.85743853830261 NA intron (NM_009154, intron 3 of 22) intron (NM_009154, intron 3 of 22) 201708 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-37 chr16 96407674 96407898 + 1.85743853830261 NA intron (NM_001177886, intron 8 of 8) intron (NM_001177886, intron 8 of 8) 35828 NM_008405 16415 Mm.12872 NM_008405 ENSMUSG00000000157 Itgb2l 5033406G21Rik|pactolus integrin beta 2-like protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-33 chr6 112695670 112695889 + 1.85743853830261 NA intron (NM_001167730, intron 1 of 13) B1_Mur4|SINE|Alu 891 NM_021385 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-46 chr18 67368948 67369140 + 1.85743853830261 NA Intergenic Intergenic -21687 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-50 chr2 49571577 49571841 + 1.85743853830261 NA Intergenic MER5A|DNA|hAT-Charlie -47605 NM_008449 16574 Mm.256342 NM_008449 ENSMUSG00000026764 Kif5c KINN|Khc|NKHC|NKHC2 kinesin family member 5C protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-72 chr4 156127729 156127924 + 1.85743853830261 NA TTS (NM_145557) TTS (NM_145557) 338 NM_001220499 100045778 NM_001220499 ENSMUSG00000110404 Rnf223 9930005F22Rik ring finger 223 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-78 chrX 6402788 6403245 + 1.85743853830261 NA intron (NM_001040459, intron 1 of 8) intron (NM_001040459, intron 1 of 8) 2984 NM_001040459 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-4 chr10 17860746 17861032 + 1.85743853830261 NA Intergenic Intergenic 64670 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-91 chr8 108369444 108369642 + 1.85743853830261 NA Intergenic Intergenic 215134 NR_077224 109215 Mm.65282 NR_077224 ENSMUSG00000110613 Lncbate1 3010033K07Rik|Lnc-BATE1 brown adipose tissue enriched long non-coding RNA 1 ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-46 chr2 125696234 125696426 + 1.85743853830261 NA intron (NM_199022, intron 1 of 11) intron (NM_199022, intron 1 of 11) 23230 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-11 chr12 79575011 79575293 + 1.85743853830261 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 277801 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-24 chr13 112495681 112496013 + 1.85743853830261 NA intron (NM_010560, intron 11 of 16) intron (NM_010560, intron 11 of 16) 31777 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-69 chr7 116269226 116269425 + 1.85743853830261 NA intron (NM_001305185, intron 3 of 26) GA-rich|Low_complexity|Low_complexity -31549 NM_001305186 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-26 chr3 87936523 87936726 + 1.85743853830261 NA intron (NM_177663, intron 2 of 3) intron (NM_177663, intron 2 of 3) 6310 NM_177663 229504 Mm.45744 NM_177663 ENSMUSG00000048039 Isg20l2 4930429N24|C80587 interferon stimulated exonuclease gene 20-like 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-64 chr3 126438849 126439050 + 1.85743853830261 NA exon (NM_173451, exon 2 of 2) exon (NM_173451, exon 2 of 2) 75097 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-74 chr5 24447624 24447819 + 1.85743853830261 NA intron (NM_022418, intron 1 of 2) CpG 125 NM_022418 64295 Mm.150098 NM_022418 ENSMUSG00000028958 Tmub1 2010004O20Rik|AB030183|Hops transmembrane and ubiquitin-like domain containing 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-19 chr13 32043076 32043340 + 1.85743853830261 NA intron (NM_146041, intron 7 of 10) intron (NM_146041, intron 7 of 10) 236562 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-15 chr13 42350334 42350615 + 1.85743853830261 NA Intergenic Intergenic 48998 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-23 chr13 41822746 41823017 + 1.85743853830261 NA intron (NM_001145875, intron 2 of 6) MIRb|SINE|MIR 24607 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-39 chr17 78109076 78109381 + 1.85743853830261 NA Intergenic Intergenic -91020 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-56 chr4 26260246 26260473 + 1.85743853830261 NA Intergenic Intergenic 86293 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-82 chr6 115991407 115991691 + 1.85743853830261 NA intron (NM_026376, intron 1 of 35) intron (NM_026376, intron 1 of 35) 3456 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-9 chr11 32553668 32553879 + 1.85743853830261 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 20507 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-60 chr4 89296162 89296366 + 1.85743853830261 NA intron (NR_132431, intron 1 of 9) intron (NR_132431, intron 1 of 9) 1084 NR_132431 102633081 Mm.409388 NR_132431 Gm12610 ANRIL|Gm12609 predicted gene 12610 ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-12 chr11 96305097 96305287 + 1.85743853830261 NA 3' UTR (NM_008268, exon 2 of 2) 3' UTR (NM_008268, exon 2 of 2) 1680 NM_008268 15413 Mm.207 NM_008268 ENSMUSG00000038700 Hoxb5 AI385717|Hox-2.1 homeobox B5 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-34 chr15 76227116 76227349 + 1.85743853830261 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 2265 NM_201385 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-70 chr4 116707945 116708204 + 1.85743853830261 NA promoter-TSS (NM_001356315) promoter-TSS (NM_001356315) 311 NM_025962 67096 Mm.252785 NM_025962 ENSMUSG00000028690 Mmachc 1810037K07Rik|CblC methylmalonic aciduria cblC type, with homocystinuria protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-29 chr5 140150073 140150376 + 1.85743853830261 NA intron (NR_152617, intron 11 of 16) intron (NR_152617, intron 11 of 16) 24694 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-19 chr15 97889458 97889707 + 1.85743853830261 NA intron (NM_009504, intron 1 of 9) intron (NM_009504, intron 1 of 9) 18714 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-16 chr12 69457009 69457205 + 1.85743853830261 NA Intergenic Intergenic 18443 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-44 chr18 40219620 40219815 + 1.85743853830261 NA promoter-TSS (NM_023311) promoter-TSS (NM_023311) -318 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-9 chr10 117035502 117035715 + 1.85743853830261 NA Intergenic Intergenic -9733 NM_146242 237560 Mm.37320 NM_146242 ENSMUSG00000060187 Lrrc10 D330003I11Rik|Hrlrrp|Serdin1 leucine rich repeat containing 10 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-42 chr18 75901248 75901470 + 1.85743853830261 NA intron (NM_145356, intron 2 of 4) intron (NM_145356, intron 2 of 4) 81181 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-84 chr7 87218016 87218217 + 1.85743853830261 NA Intergenic Intergenic -28533 NM_001285835 50490 Mm.31748 NM_015760 ENSMUSG00000030562 Nox4 AI648021 NADPH oxidase 4 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-71 chr4 150903398 150903729 + 1.85743853830261 NA intron (NM_020569, intron 5 of 6) intron (NM_020569, intron 5 of 6) 6358 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-77 chr9 114690155 114690366 + 1.85743853830261 NA intron (NM_146229, intron 2 of 12) intron (NM_146229, intron 2 of 12) 1429 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-63 chr5 32084112 32084377 + 1.85743853830261 NA intron (NM_144541, intron 11 of 11) intron (NM_144541, intron 11 of 11) -52228 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-16 chr11 99772750 99773029 + 1.85743853830261 NA promoter-TSS (NM_001126322) promoter-TSS (NM_001126322) 24 NM_001126322 100040276 Mm.475095 NM_001126322 ENSMUSG00000078668 Gm11595 - predicted gene 11595 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-26 chr14 20181510 20181736 + 1.85743853830261 NA 5' UTR (NM_021542, exon 1 of 5) 5' UTR (NM_021542, exon 1 of 5) 159 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-2 chr14 47516609 47516804 + 1.85743853830261 NA intron (NR_027414, intron 4 of 5) intron (NR_027414, intron 4 of 5) 44145 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-5 chr10 19062517 19062794 + 1.85743853830261 NA Intergenic Intergenic -47245 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-36 chr16 85073518 85073731 + 1.85743853830261 NA intron (NM_001198825, intron 5 of 15) intron (NM_001198825, intron 5 of 15) 100083 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-38 chr16 55547733 55547971 + 1.85743853830261 NA Intergenic Intergenic 53121 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-51 chr2 60548964 60549195 + 1.85743853830261 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 4229 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-70 chr8 12758603 12758855 + 1.85743853830261 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 1713 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-40 chr17 24848599 24848833 + 1.85743853830261 NA TTS (NM_023480) TTS (NM_023480) 1586 NM_023480 68636 Mm.347964 NM_023480 ENSMUSG00000045316 Fahd1 1110025H10Rik|AV002085 fumarylacetoacetate hydrolase domain containing 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-45 chr2 117676602 117676811 + 1.85743853830261 NA Intergenic Intergenic 136096 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-57 chr4 32537920 32538242 + 1.85743853830261 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 33581 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-35 chr15 77919541 77919740 + 1.85743853830261 NA intron (NM_019913, intron 3 of 3) B4|SINE|B4 9354 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-90 chr8 94771312 94771537 + 1.85743853830261 NA promoter-TSS (NM_009142) promoter-TSS (NM_009142) -756 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-24 chr13 51768769 51768974 + 1.85743853830261 NA intron (NM_013660, intron 1 of 15) intron (NM_013660, intron 1 of 15) 24876 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-67 chr4 57557588 57557876 + 1.85743853830261 NA Intergenic (CATA)n|Simple_repeat|Simple_repeat -10516 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-31 chr6 82037365 82037573 + 1.85743853830261 NA Intergenic Intergenic -4159 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-5 chr10 88357331 88357542 + 1.85743853830261 NA promoter-TSS (NM_027878) promoter-TSS (NM_027878) -361 NM_027878 71712 Mm.35450 NM_027878 ENSMUSG00000020057 Dram1 1200002N14Rik|Dram DNA-damage regulated autophagy modulator 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-66 chr4 11324382 11324617 + 1.85743853830261 NA Intergenic Intergenic -2368 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-31 chr15 81331427 81331659 + 1.85743853830261 NA intron (NM_011399, intron 4 of 8) intron (NM_011399, intron 4 of 8) 29222 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-78 chr6 71909421 71909608 + 1.85743853830261 NA promoter-TSS (NM_027275) promoter-TSS (NM_027275) 461 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-29 chr14 7865265 7865496 + 1.85743853830261 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 47423 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-31 chr14 70618432 70618749 + 1.85743853830261 NA promoter-TSS (NM_001252666) promoter-TSS (NM_001252666) -21 NM_001252666 13829 Mm.210863 NM_013514 ENSMUSG00000022099 Dmtn AI325486|Epb4.9|Epb49|dematin dematin actin binding protein protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-13 chr11 104639712 104639930 + 1.85743853830261 NA intron (NM_016780, intron 6 of 14) intron (NM_016780, intron 6 of 14) 31821 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-76 chr9 78626790 78627183 + 1.85743853830261 NA intron (NM_153098, intron 2 of 32) (TAA)n|Simple_repeat|Simple_repeat 11440 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-52 chr2 118066471 118066670 + 1.85743853830261 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 44632 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-79 chr6 72320843 72321135 + 1.85743853830261 NA intron (NM_138592, intron 11 of 12) intron (NM_138592, intron 11 of 12) 16379 NM_147779 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-15 chr11 88954839 88955033 + 1.85743853830261 NA intron (NM_029023, intron 1 of 12) intron (NM_029023, intron 1 of 12) 506 NM_029023 74617 Mm.34126 NM_029023 ENSMUSG00000000278 Scpep1 2410018F01Rik|4833411K15Rik|AI957256|Risc serine carboxypeptidase 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-41 chr17 34656295 34656542 + 1.85743853830261 NA Intergenic Intergenic 9272 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-39 chr17 17835958 17836178 + 1.85743853830261 NA intron (NM_001162909, intron 2 of 8) intron (NM_001162909, intron 2 of 8) 5093 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261 chr13 64152578 64152802 + 1.85743853830261 NA promoter-TSS (NM_001361047) promoter-TSS (NM_001361047) -317 NM_001361047 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-24 chr2 21298980 21299200 + 1.85743853830261 NA Intergenic Intergenic -68477 NM_001004761 241263 Mm.166647 NM_175706 ENSMUSG00000045967 Gpr158 5330427M13Rik|mKIAA1136 G protein-coupled receptor 158 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-48 chr19 5825208 5825431 + 1.85743853830261 NA non-coding (NR_131212, exon 1 of 1) non-coding (NR_131212, exon 1 of 1) 20159 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-13 chr12 112682968 112683301 + 1.85743853830261 NA TTS (NM_001100460) TTS (NM_001100460) 4294 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-30 chr14 46956854 46957071 + 1.85743853830261 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -2034 NR_105813 102465206 NR_105813 ENSMUSG00000099036 Mir378c Gm27930|mmu-mir-378c microRNA 378c ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-75 chr5 24995673 24995917 + 1.85743853830261 NA promoter-TSS (NM_001310480) promoter-TSS (NM_001310480) -42 NM_001310480 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-4 chr10 14045825 14046051 + 1.85743853830261 NA intron (NM_001358783, intron 2 of 12) intron (NM_001358783, intron 2 of 12) 79559 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-65 chr5 146949692 146949983 + 1.85743853830261 NA intron (NM_025652, intron 1 of 8) intron (NM_025652, intron 1 of 8) 1180 NM_025652 66596 Mm.196528 NM_025652 ENSMUSG00000016503 Gtf3a 2010015D03Rik|2610111I01Rik|5330403M05Rik general transcription factor III A protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-10 chr11 54413982 54414202 + 1.85743853830261 NA intron (NM_029105, intron 12 of 13) intron (NM_029105, intron 12 of 13) -24087 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-28 chr14 121038846 121039107 + 1.85743853830261 NA intron (NM_134082, intron 1 of 26) intron (NM_134082, intron 1 of 26) 3402 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-80 chr6 72562800 72563028 + 1.85743853830261 NA TTS (NM_001271415) TTS (NM_001271415) 13267 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-7 chr10 94020005 94020226 + 1.85743853830261 NA intron (NM_001304720, intron 1 of 11) intron (NM_001304720, intron 1 of 11) 15627 NM_001304720 215008 Mm.124177 NM_172538 ENSMUSG00000036099 Vezt A630071D13Rik|AI848282 vezatin, adherens junctions transmembrane protein protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-98 chr9 72074984 72075244 + 1.85743853830261 NA intron (NM_011544, intron 3 of 20) intron (NM_011544, intron 3 of 20) 36087 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-29 chr15 32259802 32259990 + 1.85743853830261 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 15083 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-19 chr12 32953172 32953403 + 1.85743853830261 NA promoter-TSS (NM_013635) promoter-TSS (NM_013635) 502 NR_044986 74076 Mm.50114 NR_044986 ENSMUSG00000097494 4933406C10Rik - RIKEN cDNA 4933406C10 gene ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-65 chr3 145665802 145666014 + 1.85743853830261 NA Intergenic Intergenic -15923 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-57 chr2 145723987 145724240 + 1.85743853830261 NA intron (NR_033220, intron 2 of 3) intron (NR_033220, intron 2 of 3) 22918 NR_033220 408057 Mm.486711 NR_033220 ENSMUSG00000087594 BC039771 - cDNA sequence BC039771 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-77 chr6 42546159 42546350 + 1.85743853830261 NA Intergenic Intergenic -7234 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261 chr1 43474208 43474408 + 1.85743853830261 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 28557 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-17 chr14 49171806 49172015 + 1.85743853830261 NA promoter-TSS (NM_027492) promoter-TSS (NM_027492) -336 NM_027492 70646 Mm.275688 NM_027492 ENSMUSG00000036282 Naa30 4930487N19Rik|5730533P17Rik|AI447922|AW322455|Nat12 N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-44 chr2 108045349 108045550 + 1.85743853830261 NA Intergenic Intergenic 754860 NM_021275 16492 Mm.142718 NM_021275 ENSMUSG00000042604 Kcna4 Kv1.4 potassium voltage-gated channel, shaker-related subfamily, member 4 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-51 chr3 41453054 41453288 + 1.85743853830261 NA Intergenic Intergenic 40028 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-21 chr17 71552110 71552368 + 1.85743853830261 NA intron (NM_029254, intron 1 of 6) CpG 178 NM_029254 70891 Mm.477599 NM_029254 ENSMUSG00000052525 Spdya 4921517J08Rik|4930548B21Rik|GS4|MLZ-465|Spdy1 speedy/RINGO cell cycle regulator family, member A protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-75 chr9 61946994 61947260 + 1.85743853830261 NA promoter-TSS (NM_024245) promoter-TSS (NM_024245) -328 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-58 chr4 57602826 57603028 + 1.85743853830261 NA intron (NM_001304544, intron 1 of 8) intron (NM_001304544, intron 1 of 8) 34679 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-40 chr18 33788584 33788964 + 1.85743853830261 NA Intergenic Intergenic -6118 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-58 chr2 156722988 156723229 + 1.85743853830261 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 1829 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-23 chr13 97842410 97842644 + 1.85743853830261 NA Intergenic Intergenic 91415 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-3 chr1 152788090 152788282 + 1.85743853830261 NA Intergenic Intergenic -11967 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-38 chr17 31827430 31827618 + 1.85743853830261 NA Intergenic Intergenic 28280 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-23 chr19 28200926 28201181 + 1.85743853830261 NA Intergenic Intergenic -189887 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-68 chr7 66476216 66476406 + 1.85743853830261 NA Intergenic Intergenic -48834 NM_053080 56847 Mm.140988 NM_053080 ENSMUSG00000015134 Aldh1a3 ALDH6|RALDH3|V1 aldehyde dehydrogenase family 1, subfamily A3 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-18 chr13 23729782 23730004 + 1.85743853830261 NA Intergenic Intergenic -8914 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-55 chr4 15266386 15266631 + 1.85743853830261 NA exon (NM_181401, exon 1 of 3) exon (NM_181401, exon 1 of 3) 688 NM_181401 100201 Mm.394111 NM_181401 ENSMUSG00000043252 Tmem64 9630015D15Rik|AI790744|AV300874 transmembrane protein 64 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-42 chr17 35090313 35090579 + 1.85743853830261 NA intron (NM_178592, intron 2 of 19) intron (NM_178592, intron 2 of 19) 1155 NM_178592 193742 Mm.43745 NM_178592 ENSMUSG00000007036 Abhd16a AI326074|Bat-5|Bat5|D17H6S82E|NG26 abhydrolase domain containing 16A protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-7 chr10 93051225 93051526 + 1.85743853830261 NA intron (NM_001347060, intron 5 of 67) intron (NM_001347060, intron 5 of 67) 30221 NM_001347060 380654 Mm.34980 NM_001347060 ENSMUSG00000020014 Cfap54 4930485B16Rik|Gm872 cilia and flagella associated protein 54 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-37 chr7 139782433 139782700 + 1.85743853830261 NA Intergenic RMER15|LTR|ERVL 3548 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-26 chr13 70901991 70902304 + 1.85743853830261 NA Intergenic Intergenic 19199 NM_029873 77166 Mm.159859 NM_029873 ENSMUSG00000021600 8030423J24Rik - RIKEN cDNA 8030423J24 gene protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-32 chr6 94231442 94231727 + 1.85743853830261 NA intron (NR_130996, intron 1 of 1) intron (NR_130996, intron 1 of 1) 5858 NR_130996 78178 Mm.452749 NR_130996 ENSMUSG00000045095 4930511A08Rik - RIKEN cDNA 4930511A08 gene ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-47 chr2 126360513 126360746 + 1.85743853830261 NA intron (NM_001359975, intron 21 of 27) intron (NM_001359975, intron 21 of 27) 130924 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-61 chr4 127333974 127334212 + 1.85743853830261 NA Intergenic Intergenic -3257 NM_001160012 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-33 chr16 11506312 11506645 + 1.85743853830261 NA intron (NM_028964, intron 13 of 20) intron (NM_028964, intron 13 of 20) 100830 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-88 chr8 71316812 71317074 + 1.85743853830261 NA intron (NM_001142322, intron 3 of 39) intron (NM_001142322, intron 3 of 39) 44229 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-59 chr4 84499904 84500109 + 1.85743853830261 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 175080 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-76 chr5 135914970 135915330 + 1.85743853830261 NA intron (NM_018871, intron 1 of 1) B3|SINE|B2 19491 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-3 chr2 152806414 152806627 + 1.85743853830261 NA intron (NM_009743, intron 2 of 2) PB1D10|SINE|Alu 21969 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-14 chr12 113154898 113155155 + 1.85743853830261 NA Intergenic Intergenic -1395 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 Tedc1 4930427A07Rik|AA536649|mFLJ00116 tubulin epsilon and delta complex 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-10 chr11 29656464 29656670 + 1.85743853830261 NA Intergenic Intergenic -36331 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-52 chr3 61290304 61290505 + 1.85743853830261 NA Intergenic Intergenic -74103 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-74 chr9 40448448 40448653 + 1.85743853830261 NA intron (NM_001357617, intron 1 of 20) intron (NM_001357617, intron 1 of 20) 7214 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-33 chr15 33014933 33015144 + 1.85743853830261 NA intron (NM_008304, intron 1 of 4) intron (NM_008304, intron 1 of 4) -68091 NM_018755 54381 Mm.158251 NM_018755 ENSMUSG00000039007 Cpq 1190003P12Rik|2610034C17Rik|Hls2|Lal-1|Pgcp carboxypeptidase Q protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-22 chr13 38419376 38419587 + 1.85743853830261 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 42312 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-20 chr13 32631364 32631555 + 1.85743853830261 NA Intergenic Intergenic 150320 NM_001166030 238564 Mm.60041 NM_001166030 ENSMUSG00000044951 Mylk4 EG238564 myosin light chain kinase family, member 4 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-8 chr10 94462382 94462654 + 1.85743853830261 NA intron (NM_001359762, intron 2 of 4) intron (NM_001359762, intron 2 of 4) -52339 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-60 chr3 19955237 19955448 + 1.85743853830261 NA Intergenic Intergenic -1712 NM_001276250 12870 Mm.13787 NM_007752 ENSMUSG00000003617 Cp D3Ertd555e ceruloplasmin protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-27 chr13 74616955 74617229 + 1.85743853830261 NA Intergenic Intergenic -22761 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-18 chr15 25652042 25652355 + 1.85743853830261 NA intron (NM_019472, intron 1 of 40) intron (NM_019472, intron 1 of 40) 29648 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-15 chr12 9733324 9733575 + 1.85743853830261 NA Intergenic Intergenic 159007 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-2 chr1 91067564 91067836 + 1.85743853830261 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 14256 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-2 chr1 135830570 135830779 + 1.85743853830261 NA intron (NM_133664, intron 5 of 9) intron (NM_133664, intron 5 of 9) -5660 NM_011619 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-83 chr7 70332278 70332630 + 1.85743853830261 NA intron (NR_131144, intron 1 of 3) intron (NR_131144, intron 1 of 3) 5368 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-37 chr16 10704215 10704471 + 1.85743853830261 NA intron (NM_177562, intron 21 of 22) intron (NM_177562, intron 21 of 22) 81193 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-62 chr4 150858741 150859108 + 1.85743853830261 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 3854 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-8 chr10 110919062 110919410 + 1.85743853830261 NA promoter-TSS (NM_007792) promoter-TSS (NM_007792) -940 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-25 chr13 115120155 115120476 + 1.85743853830261 NA Intergenic Intergenic -18351 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-17 chr11 116087393 116087646 + 1.85743853830261 NA promoter-TSS (NM_001347642) promoter-TSS (NM_001347642) -524 NM_001347642 22378 Mm.284792 NM_016852 ENSMUSG00000034341 Wbp2 - WW domain binding protein 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-71 chr8 46944998 46945202 + 1.85743853830261 NA Intergenic Intergenic -41787 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-43 chr9 57951715 57951987 + 1.85743853830261 NA intron (NM_011352, intron 1 of 13) intron (NM_011352, intron 1 of 13) 11716 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-5 chr10 4154186 4154439 + 1.85743853830261 NA intron (NM_001170785, intron 27 of 27) intron (NM_001170785, intron 27 of 27) 58808 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-49 chr2 137050203 137050429 + 1.85743853830261 NA intron (NM_001355671, intron 5 of 6) intron (NM_001355671, intron 5 of 6) 66204 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-6 chr11 22842288 22842536 + 1.85743853830261 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 17323 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-73 chr8 121628882 121629094 + 1.85743853830261 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 22945 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-35 chr6 134082652 134082851 + 1.85743853830261 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 47051 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-96 chr9 6270616 6270839 + 1.85743853830261 NA intron (NM_001357397, intron 1 of 6) intron (NM_001357397, intron 1 of 6) -4180 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-67 chr7 3452323 3452672 + 1.85743853830261 NA Intergenic Intergenic 27835 NM_133183 54378 Mm.424047 NM_133183 ENSMUSG00000078815 Cacng6 2310033H20Rik calcium channel, voltage-dependent, gamma subunit 6 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-22 chr13 90104126 90104558 + 1.85743853830261 NA intron (NM_025335, intron 3 of 3) intron (NM_025335, intron 3 of 3) 14675 NM_025335 66074 Mm.241387 NM_025335 ENSMUSG00000012422 Tmem167 0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a transmembrane protein 167 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-12 chr11 60780306 60780546 + 1.85743853830261 NA 3' UTR (NM_175491, exon 1 of 1) 3' UTR (NM_175491, exon 1 of 1) 2901 NM_175491 237782 Mm.57726 NM_175491 ENSMUSG00000049323 Smcr8 2310076G09Rik|AI642055|D030073L15Rik Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-68 chr4 64075095 64075440 + 1.85743853830261 NA Intergenic Intergenic -28252 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261 chr1 135733150 135733374 + 1.85743853830261 NA intron (NM_007791, intron 1 of 5) intron (NM_007791, intron 1 of 5) 4095 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-32 chr15 84754406 84754691 + 1.85743853830261 NA intron (NM_001205334, intron 6 of 12) intron (NM_001205334, intron 6 of 12) -34282 NR_040347 328576 Mm.400211 NR_040347 ENSMUSG00000116396 Gm20556 A430075N02 predicted gene, 20556 ncRNA common_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261 chr12 80212954 80213196 + 1.85743853830261 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 47296 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-55 chr2 129258385 129258609 + 1.85743853830261 NA Intergenic Intergenic 38715 NM_181589 70466 Mm.45785 NM_181589 ENSMUSG00000048327 Ckap2l 2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm cytoskeleton associated protein 2-like protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-7 chr11 51946502 51946740 + 1.85743853830261 NA Intergenic Intergenic -21010 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-4 chr1 162213353 162213650 + 1.85743853830261 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -4122 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-62 chr3 86110350 86110554 + 1.85743853830261 NA intron (NM_001082414, intron 7 of 14) intron (NM_001082414, intron 7 of 14) 26018 NM_001082414 27059 Mm.2454 NM_012059 ENSMUSG00000028082 Sh3d19 AW011754|Kryn SH3 domain protein D19 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-30 chr6 43244385 43244723 + 1.85743853830261 NA Intergenic Intergenic 8944 NM_146370 18346 Mm.222840 NM_146370 ENSMUSG00000061210 Olfr47 IB12|MOR261-9|Olfr13 olfactory receptor 47 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-45 chr18 60720023 60720256 + 1.85743853830261 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 7427 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_14_4_1.31565942988501_2.97975780982987_1.85743853830261-53 chr3 93027037 93027298 + 1.85743853830261 NA Intergenic Intergenic -8106 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-63 chr3 108012318 108012578 + 1.85743853830261 NA 3' UTR (NM_010358, exon 8 of 8) 3' UTR (NM_010358, exon 8 of 8) 5525 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-28 chr13 114734887 114735086 + 1.85743853830261 NA Intergenic Intergenic -83251 NM_013826 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding unique_peak1_13_4_1.21682597847781_2.93034108412627_1.85743853830261-92 chr8 108718668 108718934 + 1.85743853830261 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 4157 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-25 chr3 55589381 55589620 + 1.85743853830261 NA Intergenic Intergenic 127772 NM_001357476 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-12 chr12 80350612 80350822 + 1.85743853830261 NA intron (NM_177267, intron 7 of 8) intron (NM_177267, intron 7 of 8) 40960 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak2_4_12_-1.63663281602293_2.88212331012963_1.85743853830261-3 chr1 164419535 164419812 + 1.85743853830261 NA intron (NM_138314, intron 13 of 13) intron (NM_138314, intron 13 of 13) 38682 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_45_65_-0.801540817562199_5.64362371057735_1.85603025764569-2 chr13 24374363 24374883 + 1.85603025764569 NA intron (NM_001284519, intron 2 of 17) intron (NM_001284519, intron 2 of 17) -40499 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_45_65_-0.801540817562199_5.64362371057735_1.85603025764569 chr10 86779055 86779748 + 1.85603025764569 NA intron (NM_175331, intron 1 of 13) CpG 396 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding common_peak1_193_114_0.459065523893459_7.0750228128911_1.85341971012141 chr3 81037330 81038660 + 1.85341971012141 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 1579 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_138_158_-0.485905903901269_7.06993000333372_1.85341971012141 chr2 38824445 38825804 + 1.85341971012141 NA intron (NM_010264, intron 3 of 10) intron (NM_010264, intron 3 of 10) -27611 NR_029568 387176 NR_029568 ENSMUSG00000065423 Mir181a-2 Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a|mir-181a-2 microRNA 181a-2 ncRNA common_peak1_89_45_0.680751211796326_5.86393756195518_1.8512214539493 chr10 78351025 78352092 + 1.8512214539493 NA intron (NM_053014, intron 1 of 9) intron (NM_053014, intron 1 of 9) 142 NM_053014 28169 Mm.141230 NM_053014 ENSMUSG00000001211 Agpat3 AW061257|AW493985|D10Jhu12e|lpaat3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding common_peak1_89_45_0.680751211796326_5.86393756195518_1.8512214539493-2 chr17 32349635 32350567 + 1.8512214539493 NA intron (NM_017476, intron 1 of 13) intron (NM_017476, intron 1 of 13) 476 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak1_140_78_0.543661177779162_6.57561133706668_1.85088917083482 chr9 58442058 58443470 + 1.85088917083482 NA Intergenic Intergenic -12409 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak2_24_42_-1.05691091297655_4.89780929821382_1.85054049304327-2 chr5 72478573 72479159 + 1.85054049304327 NA intron (NM_001122756, intron 1 of 21) intron (NM_001122756, intron 1 of 21) 25342 NM_016869 53419 Mm.332425 NM_016869 ENSMUSG00000005220 Corin AV273130|Lrp4 corin protein-coding common_peak2_24_42_-1.05691091297655_4.89780929821382_1.85054049304327 chr17 78882188 78882554 + 1.85054049304327 NA intron (NM_011163, intron 1 of 15) intron (NM_011163, intron 1 of 15) 201 NM_011163 19106 Mm.378990 NM_011163 ENSMUSG00000024079 Eif2ak2 2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding common_peak2_25_42_-1.00072658024698_4.92590146457861_1.85054049304327 chr13 32509699 32510448 + 1.85054049304327 NA Intergenic Intergenic -171529 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_41_61_-0.841661614367495_5.53336550320313_1.84937269552405-2 chr13 100124346 100125265 + 1.84937269552405 NA promoter-TSS (NM_011420) promoter-TSS (NM_011420) -50 NM_011420 20595 Mm.2025 NM_011420 ENSMUSG00000021645 Smn1 AI849087|Gemin1|Smn survival motor neuron 1 protein-coding common_peak2_41_61_-0.841661614367495_5.53336550320313_1.84937269552405 chr12 24708923 24710001 + 1.84937269552405 NA intron (NM_009104, intron 4 of 9) intron (NM_009104, intron 4 of 9) 1208 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding common_peak2_41_61_-0.841661614367495_5.53336550320313_1.84937269552405-3 chr6 30693056 30693762 + 1.84937269552405 NA intron (NR_130775, intron 1 of 2) CpG 340 NM_031998 83922 Mm.65389 NM_031998 ENSMUSG00000029790 Cep41 1700017E11Rik|2810431D15Rik|Tsga14 centrosomal protein 41 protein-coding common_peak2_42_61_-0.807953780177443_5.55021942029815_1.84937269552405 chr1 91095691 91096485 + 1.84937269552405 NA intron (NM_008515, intron 10 of 22) intron (NM_008515, intron 10 of 22) 42644 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_41_61_-0.841661614367495_5.53336550320313_1.84937269552405 chr17 26138772 26139258 + 1.84937269552405 NA 5' UTR (NM_009733, exon 1 of 11) 5' UTR (NM_009733, exon 1 of 11) 329 NM_001159598 12005 Mm.23684 NM_009733 ENSMUSG00000024182 Axin1 AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly axin 1 protein-coding unique_peak2_42_61_-0.807953780177443_5.55021942029815_1.84937269552405 chr5 36074586 36075511 + 1.84937269552405 NA intron (NM_030889, intron 4 of 26) intron (NM_030889, intron 4 of 26) -128973 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_73_35_0.753980760041886_5.54691538146326_1.84937269552405 chr8 70611133 70611731 + 1.84937269552405 NA Intergenic CpG -3118 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak2_42_61_-0.807953780177443_5.55021942029815_1.84937269552405-2 chr8 11366705 11367511 + 1.84937269552405 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -54282 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_41_61_-0.841661614367495_5.53336550320313_1.84937269552405-4 chr6 55178395 55178874 + 1.84937269552405 NA Intergenic Intergenic -3644 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak2_153_172_-0.460848755038779_7.20420385011733_1.84910356171757 chr5 30154528 30156335 + 1.84910356171757 NA promoter-TSS (NM_178878) promoter-TSS (NM_178878) 178 NM_001289798 231086 Mm.291463 NM_145558 ENSMUSG00000059447 Hadhb 4930479F15Rik|Mtpb|TP-beta hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein-coding unique_peak1_64_29_0.831249498027229_5.32251534462213_1.84891677255723 chr15 10710977 10711915 + 1.84891677255723 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 2094 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_63_29_0.809039489462789_5.31141034033991_1.84891677255723-2 chr3 95929401 95930222 + 1.84891677255723 NA intron (NM_001253758, intron 1 of 4) CpG 554 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding unique_peak1_64_29_0.831249498027229_5.32251534462213_1.84891677255723-2 chr18 78097857 78098504 + 1.84891677255723 NA Intergenic Intergenic 25246 NM_001171010 108052 Mm.33832 NM_028122 ENSMUSG00000059336 Slc14a1 2610507K20Rik|3021401A05Rik|UT-B|Utb1 solute carrier family 14 (urea transporter), member 1 protein-coding common_peak1_63_29_0.809039489462789_5.31141034033991_1.84891677255723-3 chr4 99194135 99194684 + 1.84891677255723 NA 5' UTR (NM_175029, exon 1 of 11) 5' UTR (NM_175029, exon 1 of 11) 262 NM_001145967 242557 Mm.241663 NM_175029 ENSMUSG00000028550 Atg4c Apg4-C|Apg4c|Atg4cl|Autl1 autophagy related 4C, cysteine peptidase protein-coding common_peak2_63_29_0.809039489462789_5.31141034033991_1.84891677255723 chr7 139272550 139273219 + 1.84891677255723 NA Intergenic Intergenic 24402 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_64_29_0.831249498027229_5.32251534462213_1.84891677255723 chr1 171345770 171346242 + 1.84891677255723 NA promoter-TSS (NM_012049) promoter-TSS (NM_012049) 331 NM_011070 18637 Mm.10756 NM_011070 ENSMUSG00000006412 Pfdn2 ESTM27|W48336 prefoldin 2 protein-coding common_peak1_63_29_0.809039489462789_5.31141034033991_1.84891677255723 chr16 57690015 57690658 + 1.84891677255723 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 64401 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_64_29_0.831249498027229_5.32251534462213_1.84891677255723 chr5 88553727 88554062 + 1.84891677255723 NA promoter-TSS (NM_023054) promoter-TSS (NM_023054) -568 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak1_63_29_0.809039489462789_5.31141034033991_1.84891677255723-4 chr7 66600815 66601504 + 1.84891677255723 NA Intergenic Intergenic 88402 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_316_200_0.356932139326032_7.82951776084194_1.84884641112069 chr8 122549347 122551610 + 1.84884641112069 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 851 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak1_147_83_0.524533359132193_6.65458410234486_1.84710643173746 chr19 17394117 17394998 + 1.84710643173746 NA intron (NM_019437, intron 1 of 3) intron (NM_019437, intron 1 of 3) 514 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak1_101_121_-0.547125857572225_6.65717440877677_1.84710643173743 chr5 100620923 100621838 + 1.84710643173743 NA Intergenic Intergenic -49175 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_69_32_0.799906893614105_5.44434756616551_1.84665509793009 chr18 60624763 60625423 + 1.84665509793009 NA promoter-TSS (NM_177340) promoter-TSS (NM_177340) -788 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_38_57_-0.851607218445003_5.43217738590507_1.84665509793009 chr1 191317537 191318162 + 1.84665509793009 NA intron (NM_025424, intron 1 of 3) CpG 269 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak2_68_32_0.779294784665256_5.43404151169108_1.84665509793009 chr11 58104098 58104590 + 1.84665509793009 NA 5' UTR (NM_001356477, exon 1 of 7) 5' UTR (NM_001356477, exon 1 of 7) 115 NM_001356477 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding unique_peak1_69_32_0.799906893614105_5.44434756616551_1.84665509793009 chr18 75390622 75391851 + 1.84665509793009 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 23871 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_68_32_0.779294784665256_5.43404151169108_1.84665509793009-2 chr4 150060511 150061174 + 1.84665509793009 NA Intergenic Intergenic -7612 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak1_68_32_0.779294784665256_5.43404151169108_1.84665509793009 chr18 44661760 44662414 + 1.84665509793009 NA non-coding (NR_026853, exon 1 of 5) non-coding (NR_026853, exon 1 of 5) 179 NM_001085374 328949 Mm.312511 NM_001033406 ENSMUSG00000071856 Mcc D18Ertd451e|E330037C19 mutated in colorectal cancers protein-coding common_peak1_68_32_0.779294784665256_5.43404151169108_1.84665509793009-2 chr5 142629650 142630206 + 1.84665509793009 NA intron (NM_178398, intron 1 of 11) CpG 344 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak2_113_133_-0.523145113258416_6.80451663382856_1.84648423254952 chr15 11995058 11995995 + 1.84648423254952 NA intron (NM_011294, intron 1 of 4) CpG 481 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak1_162_93_0.500554138046787_6.80486592070103_1.84648423254949 chr14 75834206 75835514 + 1.84648423254949 NA Intergenic Intergenic 10104 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak2_133_152_-0.482889804625509_7.0159429403799_1.84640009180509 chrX 152232957 152233978 + 1.84640009180509 NA 5' UTR (NM_013668, exon 1 of 26) 5' UTR (NM_013668, exon 1 of 26) 240 NM_013668 20591 Mm.142655 NM_013668 ENSMUSG00000025332 Kdm5c D930009K15Rik|Jarid1c|Smcx|mKIAA0234 lysine (K)-specific demethylase 5C protein-coding common_peak1_256_158_0.394522038754671_7.51014397466169_1.8449863598373 chr2 125303013 125304999 + 1.8449863598373 NA intron (NM_007993, intron 64 of 65) intron (NM_007993, intron 64 of 65) 56491 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-5 chr17 82946277 82946546 + 1.84350559086818 NA Intergenic MER5A|DNA|hAT-Charlie 131814 NR_045094 100503434 Mm.187281 NR_045094 Gm19689 - predicted gene, 19689 ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-2 chr1 63776771 63776984 + 1.84350559086818 NA Intergenic Intergenic -7610 NM_001256158 74426 Mm.159197 NM_001256158 ENSMUSG00000025961 4933402D24Rik - RIKEN cDNA 4933402D24 gene protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-18 chr8 73123502 73123892 + 1.84350559086818 NA intron (NM_001317391, intron 4 of 15) intron (NM_001317391, intron 4 of 15) 107185 NR_039551 100628574 NR_039551 ENSMUSG00000093140 Mir28b mmu-mir-28b microRNA 28b ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-23 chr9 98272546 98273195 + 1.84350559086818 NA Intergenic Intergenic -23700 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-4 chr17 25785253 25785506 + 1.84350559086818 NA promoter-TSS (NM_026897) promoter-TSS (NM_026897) -41 NM_026897 68977 Mm.29230 NM_026897 ENSMUSG00000061046 Haghl 1500017E18Rik|2810014I23Rik|C330022E15Rik hydroxyacylglutathione hydrolase-like protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-7 chr11 121739318 121739560 + 1.84350559086818 NA Intergenic Intergenic 37012 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818 chr7 84548655 84548942 + 1.84350559086818 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 19844 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-10 chr16 66971252 66971560 + 1.84350559086818 NA intron (NM_178721, intron 1 of 9) intron (NM_178721, intron 1 of 9) 314288 NR_040512 75501 Mm.394300 NR_040512 ENSMUSG00000092599 1700010K23Rik - RIKEN cDNA 1700010K23 gene ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-16 chr3 69252638 69253005 + 1.84350559086818 NA Intergenic Intergenic 30402 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-21 chr8 123762966 123763204 + 1.84350559086818 NA Intergenic Intergenic 29127 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-8 chr3 37733560 37733771 + 1.84350559086818 NA Intergenic Intergenic -9305 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-3 chr17 23598604 23598982 + 1.84350559086818 NA intron (NM_011747, intron 1 of 5) intron (NM_011747, intron 1 of 5) 694 NM_011747 22654 Mm.40326 NM_011747 ENSMUSG00000062012 Zfp13 AI835008|Krox-8|Zfp-13 zinc finger protein 13 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-9 chr16 30882770 30883125 + 1.84350559086818 NA Intergenic Intergenic 198485 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-13 chr2 31141168 31141566 + 1.84350559086818 NA intron (NM_001355105, intron 1 of 15) CpG 641 NM_001355106 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-11 chr16 92930400 92930704 + 1.84350559086818 NA Intergenic Intergenic -104478 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818 chr11 19979056 19979399 + 1.84350559086818 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 54785 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-2 chr10 116296161 116296433 + 1.84350559086818 NA Intergenic Intergenic -5077 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-11 chr9 34985135 34985484 + 1.84350559086818 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -131419 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-20 chr8 105341186 105341527 + 1.84350559086818 NA intron (NM_177699, intron 1 of 21) intron (NM_177699, intron 1 of 21) 6614 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818 chr1 23270945 23271315 + 1.84350559086818 NA Intergenic Intergenic -1139 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA common_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-3 chr15 101975939 101976170 + 1.84350559086818 NA Intergenic Intergenic -21767 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-12 chr19 56940382 56940641 + 1.84350559086818 NA intron (NM_001177796, intron 5 of 19) intron (NM_001177796, intron 5 of 19) 66095 NM_172840 240675 Mm.129534 NM_172840 ENSMUSG00000025082 Vwa2 Amaco von Willebrand factor A domain containing 2 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-14 chr2 35215099 35215480 + 1.84350559086818 NA Intergenic Intergenic -14169 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-6 chr11 43844216 43844547 + 1.84350559086818 NA 5' UTR (NM_001284381, exon 2 of 5) 5' UTR (NM_001284381, exon 2 of 5) -7892 NM_007416 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-19 chr8 83740050 83740406 + 1.84350559086818 NA intron (NM_011925, intron 1 of 19) intron (NM_011925, intron 1 of 19) 1083 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-3 chr1 90435213 90435719 + 1.84350559086818 NA Intergenic Intergenic -167959 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-15 chr2 101863111 101863477 + 1.84350559086818 NA intron (NM_001355625, intron 1 of 8) intron (NM_001355625, intron 1 of 8) 19733 NM_001355625 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-22 chr9 77806572 77806847 + 1.84350559086818 NA Intergenic Intergenic 52174 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-9 chr8 10662942 10663149 + 1.84350559086818 NA Intergenic Intergenic 219409 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-8 chr14 45475504 45475776 + 1.84350559086818 NA exon (NM_001360525, exon 7 of 16) exon (NM_001360525, exon 7 of 16) 54425 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-4 chr1 189730377 189730710 + 1.84350559086818 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 2275 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-7 chr2 119174693 119174994 + 1.84350559086818 NA 5' UTR (NM_001039223, exon 1 of 1) 5' UTR (NM_001039223, exon 1 of 1) 334 NM_001039223 623781 Mm.389344 NM_001039223 ENSMUSG00000055926 Gm14137 - predicted gene 14137 protein-coding common_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-2 chr11 102948352 102948616 + 1.84350559086818 NA Intergenic Intergenic -2023 NM_011795 23829 Mm.57154 NM_011795 ENSMUSG00000045532 C1ql1 C1qrf|CRF|CTRP14|gliacolin complement component 1, q subcomponent-like 1 protein-coding common_peak2_22_6_1.44255335931189_3.52863160171355_1.84350559086818 chr2 152350072 152350283 + 1.84350559086818 NA intron (NR_033505, intron 1 of 4) intron (NR_033505, intron 1 of 4) 4508 NR_033505 791417 Mm.451219 NR_033505 ENSMUSG00000068062 Gm14164 - predicted gene 14164 ncRNA unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818 chr10 111558805 111559045 + 1.84350559086818 NA Intergenic Intergenic 35348 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-10 chr8 10909206 10909418 + 1.84350559086818 NA Intergenic Intergenic 9390 NR_102285 71624 Mm.139075 NR_102285 ENSMUSG00000109089 4833411C07Rik - RIKEN cDNA 4833411C07 gene ncRNA unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-17 chr5 113157302 113157567 + 1.84350559086818 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 5879 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak2_6_19_-1.77611904194895_3.43386857391289_1.84350559086818-6 chr17 87351828 87352182 + 1.84350559086818 NA intron (NM_028639, intron 15 of 19) intron (NM_028639, intron 15 of 19) 69119 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-5 chr1 192736148 192736530 + 1.84350559086818 NA intron (NM_144881, intron 4 of 11) intron (NM_144881, intron 4 of 11) 34880 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_22_6_1.44255335931189_3.52863160171355_1.84350559086818-24 chr9 114858045 114858492 + 1.84350559086818 NA Intergenic Intergenic -14116 NM_027294 70031 Mm.150064 NM_027294 ENSMUSG00000041012 Cmtm8 2700018N07Rik|AA408515|Cklfsf8 CKLF-like MARVEL transmembrane domain containing 8 protein-coding common_peak2_315_321_-0.327459170985829_8.1671872926217_1.84300498048579 chr8 72135268 72136727 + 1.84300498048579 NA intron (NM_001001491, intron 1 of 7) intron (NM_001001491, intron 1 of 7) 705 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_266_165_0.387048417707216_7.56856364020053_1.84289674745748 chr19 5877167 5879055 + 1.84289674745748 NA 5' UTR (NM_134154, exon 1 of 6) 5' UTR (NM_134154, exon 1 of 6) 289 NM_001361974 107375 Mm.5323 NM_134154 ENSMUSG00000024818 Slc25a45 AW491445 solute carrier family 25, member 45 protein-coding common_peak2_59_79_-0.698450529261478_5.97270283025662_1.8421414590685 chr13 69809884 69810885 + 1.8421414590685 NA intron (NM_138596, intron 1 of 3) intron (NM_138596, intron 1 of 3) 502 NM_138596 28077 Mm.52583 NM_138596 ENSMUSG00000021598 Med10 AA959813|AI385605|C78613|D13Wsu50e mediator complex subunit 10 protein-coding common_peak1_95_49_0.652909497524038_5.97031093853674_1.84214145906848 chr11 89059408 89060531 + 1.84214145906848 NA promoter-TSS (NR_110336) promoter-TSS (NR_110336) 779 NM_019505 56077 Mm.153695 NM_019505 ENSMUSG00000000276 Dgke C87606|DAGK6|DGK diacylglycerol kinase, epsilon protein-coding common_peak1_126_146_-0.502032723262449_6.94865598320514_1.84051097525091 chr8 122225857 122227314 + 1.84051097525091 NA Intergenic Intergenic -55556 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_134_74_0.556330079584914_6.50698373028834_1.84041239157882-2 chr4 155172447 155173505 + 1.84041239157882 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 49559 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_134_74_0.556330079584914_6.50698373028834_1.84041239157882 chr1 74296118 74297177 + 1.84041239157882 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 7689 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_203_121_0.445819162854531_7.15364691899015_1.8395068115104 chr19 6295951 6297679 + 1.8395068115104 NA intron (NM_010119, intron 3 of 4) intron (NM_010119, intron 3 of 4) -9642 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak2_237_250_-0.374163606186679_7.78446175085743_1.83884711405367 chr13 108042861 108045454 + 1.83884711405367 NA promoter-TSS (NM_001048250) promoter-TSS (NM_001048250) -317 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_114_61_0.601258910590014_6.25482576568188_1.83840428121433 chr19 7482456 7483210 + 1.83840428121433 NA intron (NM_001003934, intron 1 of 8) intron (NM_001003934, intron 1 of 8) 458 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak2_64_84_-0.671250842501954_6.07376551488673_1.83750281924154 chr7 28981237 28981858 + 1.83750281924154 NA promoter-TSS (NM_001355054) promoter-TSS (NM_001355054) 341 NM_001285943 73830 Mm.29714 NM_028659 ENSMUSG00000053565 Eif3k 1200009C21Rik|Eif3s12 eukaryotic translation initiation factor 3, subunit K protein-coding common_peak2_63_84_-0.693460851066394_6.0626605106045_1.83750281924154 chr7 143739802 143740309 + 1.83750281924154 NA intron (NM_024289, intron 1 of 21) intron (NM_024289, intron 1 of 21) 305 NM_001199227 79196 Mm.21199 NM_024289 ENSMUSG00000037606 Osbpl5 1110006M06Rik|AI462538|ORP5|Obph1|Osbp2 oxysterol binding protein-like 5 protein-coding common_peak1_64_84_-0.671250842501954_6.07376551488673_1.83750281924154 chr5 96996747 96997414 + 1.83750281924154 NA promoter-TSS (NM_080708) promoter-TSS (NM_080708) -609 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak2_64_84_-0.671250842501954_6.07376551488673_1.83750281924154-2 chr8 121107841 121108374 + 1.83750281924154 NA intron (NM_001166482, intron 1 of 8) CpG 272 NM_172761 234814 Mm.31690 NM_172761 ENSMUSG00000031816 Mthfsd AW049977|BC052066|C920004D05 methenyltetrahydrofolate synthetase domain containing protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-9 chr18 12109577 12110175 + 1.83731222263754 NA intron (NM_178801, intron 3 of 14) intron (NM_178801, intron 3 of 14) 11661 NR_110356 338363 Mm.271567 NM_178801 ENSMUSG00000049411 Tmem241 6030446N20Rik transmembrane protein 241 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-21 chr9 64463275 64463655 + 1.83731222263754 NA intron (NM_001134399, intron 1 of 24) (AGGGGG)n|Simple_repeat|Simple_repeat 77839 NM_001134399 214058 Mm.127721 NM_172522 ENSMUSG00000036466 Megf11 2410080H04Rik|D130061K05 multiple EGF-like-domains 11 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-12 chr2 93320181 93320668 + 1.83731222263754 NA intron (NM_183180, intron 1 of 9) intron (NM_183180, intron 1 of 9) 14063 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding unique_peak2_10_24_-1.45057082803118_3.91857077575914_1.83731222263754-5 chr9 57251273 57251694 + 1.83731222263754 NA TTS (NM_028820) TTS (NM_028820) 11116 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-16 chr4 126313579 126313978 + 1.83731222263754 NA 3' UTR (NM_199473, exon 4 of 4) 3' UTR (NM_199473, exon 4 of 4) 7925 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-8 chr15 28181853 28182222 + 1.83731222263754 NA Intergenic Intergenic -21729 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-17 chr4 139256738 139257214 + 1.83731222263754 NA intron (NM_001037761, intron 2 of 9) intron (NM_001037761, intron 2 of 9) 53732 NR_151463 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-7 chr15 11123546 11123862 + 1.83731222263754 NA intron (NM_175501, intron 2 of 23) (TTTTG)n|Simple_repeat|Simple_repeat 58931 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-10 chr2 29856851 29857312 + 1.83731222263754 NA Intergenic Intergenic -11354 NR_029838 723904 NR_029838 ENSMUSG00000065485 Mir219a-2 Mir219-2|Mirn219-2|mir-219a-2|mmu-mir-219a-2 microRNA 219a-2 ncRNA unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-20 chr8 46811134 46811394 + 1.83731222263754 NA intron (NR_152560, intron 5 of 7) intron (NR_152560, intron 5 of 7) 71519 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-18 chr7 80442963 80443337 + 1.83731222263754 NA Intergenic Intergenic -37714 NM_001081454 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak2_28_9_1.26003990606315_3.95194804791894_1.83731222263754-2 chr14 67888634 67888961 + 1.83731222263754 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) -29052 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-6 chr13 96976213 96976697 + 1.83731222263754 NA Intergenic Intergenic 51766 NM_001166065 218476 Mm.483490 NM_001166065 ENSMUSG00000091387 Gcnt4 C2gnt3|Gm279|Gm73 glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase) protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-11 chr2 73911497 73912006 + 1.83731222263754 NA promoter-TSS (NM_175015) promoter-TSS (NM_175015) -425 NM_001301722 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding unique_peak2_10_24_-1.45057082803118_3.91857077575914_1.83731222263754-4 chr8 105305335 105305726 + 1.83731222263754 NA promoter-TSS (NM_172760) promoter-TSS (NM_172760) -71 NM_172760 234683 Mm.237966 NM_172760 ENSMUSG00000014791 Elmo3 9930107J06|BC058752|CED-12|Ced12 engulfment and cell motility 3 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-4 chr11 8452990 8453254 + 1.83731222263754 NA exon (NM_001083587, exon 21 of 31) exon (NM_001083587, exon 21 of 31) 211413 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_28_9_1.26003990606315_3.95194804791894_1.83731222263754 chr11 99582124 99582352 + 1.83731222263754 NA TTS (NM_001039502) TTS (NM_001039502) -1222 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-15 chr3 27698006 27698608 + 1.83731222263754 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 12145 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-3 chr10 77581328 77581609 + 1.83731222263754 NA promoter-TSS (NM_145925) promoter-TSS (NM_145925) -187 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-19 chr7 142436282 142436615 + 1.83731222263754 NA promoter-TSS (NM_001285861) promoter-TSS (NM_001285861) -386 NM_001285861 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-22 chr9 71694464 71695047 + 1.83731222263754 NA intron (NM_001304362, intron 8 of 18) C-rich|Low_complexity|Low_complexity 76847 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754 chr1 74029964 74030340 + 1.83731222263754 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 94295 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-2 chr1 126817357 126817792 + 1.83731222263754 NA intron (NM_176957, intron 1 of 12) intron (NM_176957, intron 1 of 12) 13058 NM_176957 210356 Mm.377234 NM_172484 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5 NCK-associated protein 5 protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-13 chr2 102701918 102702220 + 1.83731222263754 NA intron (NM_001077514, intron 1 of 10) intron (NM_001077514, intron 1 of 10) -4369 NM_011393 20511 Mm.267547 NM_011393 ENSMUSG00000005089 Slc1a2 1700091C19Rik|2900019G14Rik|AI159670|Eaat2|GLT-1|GLT1|MGLT1 solute carrier family 1 (glial high affinity glutamate transporter), member 2 protein-coding unique_peak2_10_24_-1.45057082803118_3.91857077575914_1.83731222263754-2 chr15 61770615 61771064 + 1.83731222263754 NA intron (NR_040350, intron 2 of 4) intron (NR_040350, intron 2 of 4) 3612 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-23 chrX 96103262 96103684 + 1.83731222263754 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 7428 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-14 chr3 27588968 27589470 + 1.83731222263754 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -4224 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak2_10_24_-1.45057082803118_3.91857077575914_1.83731222263754-3 chr6 97305572 97306103 + 1.83731222263754 NA intron (NM_145148, intron 17 of 23) intron (NM_145148, intron 17 of 23) -53057 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_28_9_1.26003990606315_3.95194804791894_1.83731222263754-5 chr11 67904299 67904604 + 1.83731222263754 NA intron (NM_173754, intron 2 of 14) intron (NM_173754, intron 2 of 14) 17702 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding unique_peak2_10_24_-1.45057082803118_3.91857077575914_1.83731222263754 chr12 40108763 40109178 + 1.83731222263754 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 25258 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding common_peak1_85_42_0.712922795934091_5.78272615266914_1.83730396867939-3 chr9 108691767 108692939 + 1.83730396867939 NA 5' UTR (NM_008924, exon 1 of 11) 5' UTR (NM_008924, exon 1 of 11) 210 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding common_peak2_84_42_0.696168021814988_5.77434876560959_1.83730396867939 chr13 48869634 48870650 + 1.83730396867939 NA intron (NM_011078, intron 1 of 21) CpG 743 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_84_42_0.696168021814988_5.77434876560959_1.83730396867939 chr12 28749765 28750404 + 1.83730396867939 NA intron (NM_001161410, intron 1 of 11) intron (NM_001161410, intron 1 of 11) 310 NM_001161410 217449 Mm.132006 NM_178811 ENSMUSG00000020628 Trappc12 CGI-87|D930014A20Rik|Ttc15 trafficking protein particle complex 12 protein-coding common_peak1_85_42_0.712922795934091_5.78272615266914_1.83730396867939-2 chr9 50005968 50006643 + 1.83730396867939 NA Intergenic Intergenic -206912 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_85_42_0.712922795934091_5.78272615266914_1.83730396867939 chr14 70598983 70599798 + 1.83730396867939 NA intron (NM_194345, intron 1 of 16) CpG 445 NM_194345 239170 Mm.247582 NM_194345 ENSMUSG00000022095 Fam160b2 G430067P06Rik|Rai16 family with sequence similarity 160, member B2 protein-coding unique_peak1_84_42_0.696168021814988_5.77434876560959_1.83730396867939 chr19 5851031 5851945 + 1.83730396867939 NA 3' UTR (NM_026169, exon 11 of 11) 3' UTR (NM_026169, exon 11 of 11) -6008 NR_003513 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_84_42_0.696168021814988_5.77434876560959_1.83730396867939-2 chr4 95557196 95558731 + 1.83730396867939 NA intron (NM_001113412, intron 1 of 15) intron (NM_001113412, intron 1 of 15) 456 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak2_69_89_-0.647552083357116_6.16807705465112_1.83646978280668 chr2 117539458 117541104 + 1.83646978280668 NA Intergenic Intergenic -197404 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak2_68_89_-0.668164192305966_6.15777100017669_1.83646978280668 chr2 60694945 60695776 + 1.83646978280668 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -21667 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_108_57_0.620713890000874_6.16833794012801_1.83646978280667-2 chr9 21424997 21425970 + 1.83646978280667 NA intron (NM_001357721, intron 1 of 19) intron (NM_001357721, intron 1 of 19) 575 NM_001357719 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak1_108_57_0.620713890000874_6.16833794012801_1.83646978280667 chr5 129724301 129725668 + 1.83646978280667 NA promoter-TSS (NM_008095) promoter-TSS (NM_008095) -91 NM_008095 14467 Mm.12468 NM_008095 ENSMUSG00000029432 Nipsnap2 AV006093|Gbas nipsnap homolog 2 protein-coding common_peak1_141_79_0.535637667246125_6.58974692851043_1.83479689671668-2 chr3 53862728 53864030 + 1.83479689671668 NA intron (NM_026435, intron 2 of 5) intron (NM_026435, intron 2 of 5) 428 NM_026435 67890 Mm.23067 NM_026435 ENSMUSG00000027746 Ufm1 1810045K17Rik|AI132708|AI463323|Gm10726 ubiquitin-fold modifier 1 protein-coding common_peak1_141_79_0.535637667246125_6.58974692851043_1.83479689671668 chr3 52102350 52104425 + 1.83479689671668 NA intron (NM_001004176, intron 1 of 4) CpG 1619 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_187_110_0.46513547780546_7.02698360525284_1.83454128498202 chr8 105297123 105298548 + 1.83454128498202 NA exon (NM_148952, exon 1 of 10) exon (NM_148952, exon 1 of 10) 172 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding common_peak2_211_226_-0.394888391167544_7.62910429170714_1.8342959751742 chr1 43237658 43241142 + 1.8342959751742 NA Intergenic AT_rich|Low_complexity|Low_complexity -42639 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_156_89_0.509564214694731_6.74663520367704_1.83136351594133 chr11 97440890 97442713 + 1.83136351594133 NA Intergenic Intergenic -8359 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_128_70_0.570276033358961_6.43488513618416_1.83135992010059 chr15 85677345 85678680 + 1.83135992010059 NA Intergenic Intergenic -25761 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_127_70_0.559127985993381_6.42931111250137_1.83135992010059 chr8 86800925 86802166 + 1.83135992010059 NA Intergenic MER21B|LTR|ERVL -55539 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak2_128_70_0.570276033358961_6.43488513618416_1.83135992010059 chr16 43247475 43248788 + 1.83135992010059 NA intron (NM_181058, intron 1 of 6) intron (NM_181058, intron 1 of 6) 847 NM_019778 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288 zinc finger and BTB domain containing 20 protein-coding common_peak1_84_105_-0.605487678046113_6.42517661554014_1.83135992010059 chr7 121034724 121035438 + 1.83135992010059 NA intron (NM_021554, intron 1 of 4) CpG 636 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding unique_peak1_46_19_0.951733208414692_4.79779469909471_1.82978420966174 chr19 26607141 26608006 + 1.82978420966174 NA intron (NM_011416, intron 1 of 32) CpG 2413 NM_011416 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak1_46_19_0.951733208414692_4.79779469909471_1.82978420966174 chr8 69114890 69115621 + 1.82978420966174 NA Intergenic Intergenic 25698 NM_199364 211134 Mm.409446 NM_199364 ENSMUSG00000036306 Lzts1 F37|FEZ1|PSD-Zip70 leucine zipper, putative tumor suppressor 1 protein-coding common_peak2_22_39_-1.07201981351786_4.78591818812843_1.82978420966174 chr10 122890565 122891316 + 1.82978420966174 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 94784 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_22_39_-1.07201981351786_4.78591818812843_1.82978420966174-2 chr4 99491577 99492009 + 1.82978420966174 NA Intergenic Intergenic -164506 NM_010425 15221 Mm.4758 NM_010425 ENSMUSG00000067261 Foxd3 CWH3|Genesis|Hfh2 forkhead box D3 protein-coding common_peak2_46_19_0.951733208414692_4.79779469909471_1.82978420966174 chr14 57316948 57317261 + 1.82978420966174 NA intron (NM_030004, intron 3 of 7) intron (NM_030004, intron 3 of 7) 81379 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_221_134_0.420870787087577_7.28725099059462_1.82951921830053 chr6 146909146 146911078 + 1.82951921830053 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 21618 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_55_24_0.880787924443956_5.0842501519967_1.82819694957564-3 chr5 92843761 92844734 + 1.82819694957564 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 34865 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_28_46_-0.972620850727127_5.06827842631407_1.82819694957564-2 chr18 84867432 84867854 + 1.82819694957564 NA intron (NM_001348159, intron 1 of 5) intron (NM_001348159, intron 1 of 5) 16305 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding common_peak2_55_24_0.880787924443956_5.0842501519967_1.82819694957564-2 chr4 118620947 118621346 + 1.82819694957564 NA promoter-TSS (NM_026789) promoter-TSS (NM_026789) 347 NM_026932 69072 Mm.29906 NM_026932 ENSMUSG00000028729 Ebna1bp2 1810014B19Rik|AA537058|B830003A16Rik|C81321|Ebp2|Nobp|p40 EBNA1 binding protein 2 protein-coding common_peak2_55_24_0.880787924443956_5.0842501519967_1.82819694957564 chr3 40846185 40846645 + 1.82819694957564 NA promoter-TSS (NR_038067) promoter-TSS (NR_038067) 439 NM_028140 72175 Mm.130610 NM_028140 ENSMUSG00000025759 Mfsd8 2810423E13Rik|AI836898|AV142426|Cln7 major facilitator superfamily domain containing 8 protein-coding common_peak1_55_24_0.880787924443956_5.0842501519967_1.82819694957564-4 chr7 110773985 110774572 + 1.82819694957564 NA intron (NM_009667, intron 1 of 14) intron (NM_009667, intron 1 of 14) 1674 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_55_24_0.880787924443956_5.0842501519967_1.82819694957564 chr2 125355001 125355597 + 1.82819694957564 NA intron (NM_007993, intron 32 of 65) intron (NM_007993, intron 32 of 65) 107784 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_55_24_0.880787924443956_5.0842501519967_1.82819694957564-2 chr3 89177547 89178252 + 1.82819694957564 NA TTS (NM_007712) TTS (NM_007712) 508 NM_011886 24045 Mm.257052 NM_011886 ENSMUSG00000028049 Scamp3 Sc3 secretory carrier membrane protein 3 protein-coding common_peak2_28_46_-0.972620850727127_5.06827842631407_1.82819694957564 chr1 51915197 51915836 + 1.82819694957564 NA intron (NM_010863, intron 1 of 29) CpG 462 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding common_peak2_127_147_-0.500578260130887_6.95916423556351_1.82817723636345 chr13 5802863 5804770 + 1.82817723636345 NA Intergenic Intergenic 54276 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_80_39_0.731454358240251_5.68765527400749_1.82572255783529-4 chr7 38183268 38184186 + 1.82572255783529 NA promoter-TSS (NM_028166) promoter-TSS (NM_028166) -60 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak1_80_39_0.731454358240251_5.68765527400749_1.82572255783529-5 chr8 23038772 23039405 + 1.82572255783529 NA intron (NM_001277284, intron 1 of 42) intron (NM_001277284, intron 1 of 42) 3989 NM_001277284 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding common_peak1_80_39_0.731454358240251_5.68765527400749_1.82572255783529-3 chr4 141274768 141275570 + 1.82572255783529 NA Intergenic Intergenic -3270 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak2_46_66_-0.792427887155718_5.66987524687991_1.82572255783529-2 chr5 33820769 33821588 + 1.82572255783529 NA Intergenic CpG -21934 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding common_peak1_79_39_0.713658888937823_5.67875753935627_1.82572255783529 chr14 69731788 69732603 + 1.82572255783529 NA promoter-TSS (NR_130166) promoter-TSS (NR_130166) 375 NM_134078 105513 Mm.159637 NM_134078 ENSMUSG00000034190 Chmp7 4930596K11Rik|6330407G04Rik|AI450338|AW550775 charged multivesicular body protein 7 protein-coding common_peak1_79_39_0.713658888937823_5.67875753935627_1.82572255783529-2 chr4 105365278 105366014 + 1.82572255783529 NA Intergenic Intergenic 208299 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_80_39_0.731454358240251_5.68765527400749_1.82572255783529 chr4 63215404 63216379 + 1.82572255783529 NA intron (NM_025685, intron 1 of 60) CpG-9975 479 NM_025685 373864 Mm.194116 NM_025685 ENSMUSG00000045672 Col27a1 5730512J02Rik|AI449266 collagen, type XXVII, alpha 1 protein-coding common_peak1_80_39_0.731454358240251_5.68765527400749_1.82572255783529-2 chr4 130172445 130173385 + 1.82572255783529 NA intron (NM_001168333, intron 3 of 11) intron (NM_001168333, intron 3 of 11) 1887 NM_001168333 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak1_79_39_0.713658888937823_5.67875753935627_1.82572255783529-3 chr8 122170250 122171158 + 1.82572255783529 NA Intergenic Intergenic -111437 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_46_66_-0.792427887155718_5.66987524687991_1.82572255783529 chr11 62879543 62880103 + 1.82572255783529 NA intron (NM_001356521, intron 1 of 6) intron (NM_001356521, intron 1 of 6) 368 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak1_55_75_-0.723283399224905_5.88628581383113_1.82508467444514 chr4 135352685 135353088 + 1.82508467444514 NA intron (NM_016799, intron 1 of 17) CpG 328 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding unique_peak1_90_46_0.665553392778361_5.88736554806682_1.82508467444514-2 chr4 139250839 139252004 + 1.82508467444514 NA intron (NM_001037761, intron 2 of 9) intron (NM_001037761, intron 2 of 9) 57310 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_55_75_-0.723283399224905_5.88628581383113_1.82508467444514 chr12 54862316 54862831 + 1.82508467444514 NA intron (NM_007688, intron 1 of 3) CpG 304 NM_007688 12632 Mm.276826 NM_007688 ENSMUSG00000062929 Cfl2 - cofilin 2, muscle protein-coding common_peak1_91_46_0.681209470545373_5.89519358695032_1.82508467444514 chr2 52857842 52859062 + 1.82508467444514 NA intron (NM_172409, intron 1 of 26) CpG 584 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak1_90_46_0.665553392778361_5.88736554806682_1.82508467444514 chr2 145787955 145789091 + 1.82508467444514 NA intron (NM_028724, intron 2 of 12) intron (NM_028724, intron 2 of 12) 2407 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding common_peak2_135_75_0.547793384746378_6.52182420581677_1.82364696432849 chr4 155172392 155173480 + 1.82364696432849 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 49599 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_320_204_0.346466560177922_7.85271337959441_1.82208145576149 chr2 32628563 32631828 + 1.82208145576149 NA intron (NM_001198791, intron 3 of 6) intron (NM_001198791, intron 3 of 6) 695 NM_021515 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding common_peak2_164_182_-0.443086914278893_7.2941563811446_1.81980385822831 chr4 32238084 32240385 + 1.81980385822831 NA Intergenic CpG -178201 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_197_117_0.451148578116884_7.10821733842028_1.8196273904543 chr19 53530870 53532249 + 1.8196273904543 NA intron (NM_001085390, intron 1 of 3) intron (NM_001085390, intron 1 of 3) 2241 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_97_117_-0.556339885569031_6.60447310657733_1.81903737129079 chr15 62327329 62328471 + 1.81903737129079 NA Intergenic Intergenic -108449 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_115_62_0.590578118304105_6.27256898265197_1.81852113799162 chr7 19361318 19361980 + 1.81852113799162 NA intron (NM_001010836, intron 1 of 12) intron (NM_001010836, intron 1 of 12) 433 NM_001010836 333654 Mm.333640 NM_001010836 ENSMUSG00000040734 Ppp1r13l AV260376|IASPP|Nkip1|wa3 protein phosphatase 1, regulatory (inhibitor) subunit 13 like protein-coding common_peak1_97_50_0.653877821821315_5.99936425288215_1.81799280824917 chr17 24454261 24455288 + 1.81799280824917 NA intron (NR_125990, intron 1 of 13) CpG 618 NM_001301784 13560 Mm.163132 NM_007893 ENSMUSG00000024137 E4f1 p120E4F|phi-AP3 E4F transcription factor 1 protein-coding common_peak2_60_80_-0.692693933581748_5.99350303609375_1.81799280824916-3 chr4 45506429 45507986 + 1.81799280824916 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 23621 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_60_80_-0.692693933581748_5.99350303609375_1.81799280824916 chr18 61951459 61952144 + 1.81799280824916 NA Intergenic Intergenic -1274 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak2_60_80_-0.692693933581748_5.99350303609375_1.81799280824916-2 chr2 155381878 155382520 + 1.81799280824916 NA intron (NM_178111, intron 1 of 3) CpG 343 NM_178111 68728 Mm.293605 NM_178111 ENSMUSG00000038375 Trp53inp2 1110029F20Rik|Tp53inp2 transformation related protein 53 inducible nuclear protein 2 protein-coding common_peak2_103_123_-0.542768095078251_6.68281226284775_1.81703281427846 chr10 80053694 80054855 + 1.81703281427846 NA exon (NM_001037741, exon 1 of 7) exon (NM_001037741, exon 1 of 7) 255 NM_001037741 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding common_peak1_75_36_0.752655109342952_5.58578092030043_1.81698892938371 chr1 153332119 153332900 + 1.81698892938371 NA exon (NM_010683, exon 1 of 28) exon (NM_010683, exon 1 of 28) 277 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak2_32_50_-0.905359357573737_5.21974566318463_1.81587567260303-2 chr19 16957258 16957821 + 1.81587567260303 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 1421 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_60_27_0.839801147245272_5.22725549568024_1.81587567260303 chr1 169969463 169970255 + 1.81587567260303 NA promoter-TSS (NM_010476) promoter-TSS (NM_010476) 450 NR_040438 67303 Mm.396611 NR_040438 ENSMUSG00000097503 3110045C21Rik AI838577 RIKEN cDNA 3110045C21 gene ncRNA common_peak2_32_50_-0.905359357573737_5.21974566318463_1.81587567260303 chr12 105001269 105001699 + 1.81587567260303 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -2807 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_60_27_0.839801147245272_5.22725549568024_1.81587567260303 chr6 5442118 5442884 + 1.81587567260303 NA Intergenic Intergenic 52091 NM_001355662 65255 Mm.51340 NM_023048 ENSMUSG00000042607 Asb4 8430401O13Rik|AV117194|AW060255 ankyrin repeat and SOCS box-containing 4 protein-coding common_peak2_60_27_0.839801147245272_5.22725549568024_1.81587567260303 chr18 38081149 38081580 + 1.81587567260303 NA Intergenic Intergenic -82395 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_70_90_-0.643173898491965_6.18620769095271_1.81538495166911 chr12 25099693 25100520 + 1.81538495166911 NA Intergenic Intergenic -4014 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_70_90_-0.643173898491965_6.18620769095271_1.81538495166911 chr9 75558700 75559473 + 1.81538495166911 NA intron (NM_001357828, intron 1 of 10) intron (NM_001357828, intron 1 of 10) 571 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak1_109_58_0.609134272415853_6.18721018556977_1.81538495166911 chr3 116711728 116712858 + 1.81538495166911 NA promoter-TSS (NM_001362374) promoter-TSS (NM_001362374) -13 NM_001362374 229782 Mm.190758 NM_144902 ENSMUSG00000027957 Slc35a3 2310050P13Rik solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 protein-coding common_peak1_232_245_-0.375550070784913_7.75473946994678_1.81512618457649 chr13 95546090 95548631 + 1.81512618457649 NA Intergenic Intergenic -22120 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_438_289_0.294498847189963_8.32715851360992_1.81503709416989 chr2 157564613 157567937 + 1.81503709416989 NA promoter-TSS (NM_016916) promoter-TSS (NM_016916) 86 NM_001355426 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak1_355_356_-0.305582996775659_8.32698876564127_1.81503709416979 chr11 48869215 48872858 + 1.81503709416979 NA intron (NM_008326, intron 1 of 2) intron (NM_008326, intron 1 of 2) 384 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak2_65_85_-0.666253749877583_6.09313787976331_1.81501387379333-2 chr7 143069369 143070303 + 1.81501387379333 NA 5' UTR (NM_020285, exon 2 of 3) 5' UTR (NM_020285, exon 2 of 3) 468 NM_001115085 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding common_peak2_65_85_-0.666253749877583_6.09313787976331_1.81501387379333 chr1 132309207 132310246 + 1.81501387379333 NA Intergenic Intergenic -6399 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_333_213_0.341350406052154_7.91214218942722_1.81392622055022 chr5 139908053 139911020 + 1.81392622055022 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 1593 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_251_155_0.393858120238098_7.4823312789813_1.81388289129873 chr12 85958824 85960950 + 1.81388289129873 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 119154 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616-4 chr5 90634199 90635086 + 1.81352036806616 NA intron (NM_001310656, intron 1 of 10) intron (NM_001310656, intron 1 of 10) 5885 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding common_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616 chr15 77916276 77916588 + 1.81352036806616 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 12562 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616-3 chr7 109708561 109709167 + 1.81352036806616 NA intron (NM_020616, intron 4 of 5) intron (NM_020616, intron 4 of 5) 5127 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding unique_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616 chr19 23142066 23142473 + 1.81352036806616 NA intron (NM_010638, intron 1 of 1) CpG 1043 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_43_17_1.00925040115475_4.67455020201969_1.81352036806616 chr14 11612825 11613128 + 1.81352036806616 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 59423 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616-3 chr2 145656258 145656690 + 1.81352036806616 NA Intergenic Intergenic -44721 NR_033220 408057 Mm.486711 NR_033220 ENSMUSG00000087594 BC039771 - cDNA sequence BC039771 ncRNA unique_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616-2 chr5 21486688 21487317 + 1.81352036806616 NA intron (NM_001199632, intron 19 of 20) intron (NM_001199632, intron 19 of 20) -56525 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_43_17_1.00925040115475_4.67455020201969_1.81352036806616-2 chr2 120404298 120404715 + 1.81352036806616 NA promoter-TSS (NM_001110496) promoter-TSS (NM_001110496) -390 NM_001110496 211499 Mm.260712 NM_173734 ENSMUSG00000033808 Tmem87a A930025J12Rik transmembrane protein 87A protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615-5 chr2 152677570 152678230 + 1.81352036806615 NA intron (NM_010376, intron 2 of 11) intron (NM_010376, intron 2 of 11) 8439 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615 chr1 40528565 40529217 + 1.81352036806615 NA intron (NM_010553, intron 6 of 12) intron (NM_010553, intron 6 of 12) 13529 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615-3 chr11 18590885 18591422 + 1.81352036806615 NA Intergenic Intergenic 427816 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615-6 chr5 142959449 142959922 + 1.81352036806615 NA promoter-TSS (NM_007984) promoter-TSS (NM_007984) -670 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615-7 chr8 70684756 70685444 + 1.81352036806615 NA Intergenic Intergenic 11869 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_20_36_-1.08986369003633_4.66452152061079_1.81352036806615 chr17 46751728 46752168 + 1.81352036806615 NA intron (NM_028065, intron 1 of 5) CpG 266 NM_001305989 72029 Mm.240325 NM_028065 ENSMUSG00000023973 Cnpy3 1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5 canopy FGF signaling regulator 3 protein-coding common_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615 chr5 115017329 115017742 + 1.81352036806615 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 6011 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615-4 chr15 102042087 102042719 + 1.81352036806615 NA Intergenic Intergenic 14187 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding unique_peak2_20_36_-1.08986369003633_4.66452152061079_1.81352036806615 chr5 105805603 105806034 + 1.81352036806615 NA intron (NM_001122768, intron 2 of 2) PB1D9|SINE|Alu -70750 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding unique_peak2_19_36_-1.15975642265728_4.62957515430031_1.81352036806615-2 chr10 17004794 17005466 + 1.81352036806615 NA intron (NR_038020, intron 1 of 8) AT_rich|Low_complexity|Low_complexity 90652 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_39_58_-0.840001085963411_5.46264250638014_1.81177654248742 chr6 47752940 47753227 + 1.81177654248742 NA promoter-TSS (NR_002841).10 promoter-TSS (NR_002841).10 -158 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_70_33_0.777157900456392_5.47604179147853_1.81177654248742 chr12 85486209 85487051 + 1.81177654248742 NA Intergenic Intergenic 12740 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_70_33_0.777157900456392_5.47604179147853_1.81177654248742-2 chr19 9082784 9083816 + 1.81177654248742 NA TTS (NM_011681) TTS (NM_011681) 4656 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_39_58_-0.840001085963411_5.46264250638014_1.81177654248742 chr1 88532178 88533252 + 1.81177654248742 NA Intergenic Intergenic -18802 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak2_65_30_0.80581469443764_5.35710365760569_1.81099027427053-2 chr19 32346618 32347127 + 1.81099027427053 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 2444 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_65_30_0.80581469443764_5.35710365760569_1.81099027427053-3 chr4 123016608 123017359 + 1.81099027427053 NA intron (NR_151450, intron 1 of 9) intron (NR_151450, intron 1 of 9) 390 NR_151450 66966 Mm.235030 NM_025873 ENSMUSG00000028653 Trit1 2310075G14Rik|AI314189|AI314635|AV099619|IPPT|IPT|MOD5 tRNA isopentenyltransferase 1 protein-coding common_peak1_65_30_0.80581469443764_5.35710365760569_1.81099027427053-2 chr3 27862418 27863305 + 1.81099027427053 NA Intergenic Intergenic 33507 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding common_peak1_65_30_0.80581469443764_5.35710365760569_1.81099027427053 chr18 84674429 84675268 + 1.81099027427053 NA intron (NM_023149, intron 6 of 11) intron (NM_023149, intron 6 of 11) 7211 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak2_65_30_0.80581469443764_5.35710365760569_1.81099027427053 chr12 59095688 59096017 + 1.81099027427053 NA promoter-TSS (NM_177321) promoter-TSS (NM_177321) 52 NM_177321 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak1_35_54_-0.889648464851955_5.33653548109868_1.81099027427052 chrX 77795068 77795714 + 1.81099027427052 NA intron (NM_016979, intron 1 of 8) CpG 569 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding unique_peak2_35_54_-0.889648464851955_5.33653548109868_1.81099027427052 chr19 46530558 46531395 + 1.81099027427052 NA TTS (NM_019718) TTS (NM_019718) 29328 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_35_54_-0.889648464851955_5.33653548109868_1.81099027427052 chr1 79580734 79581457 + 1.81099027427052 NA Intergenic Intergenic 90877 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-10 chr9 56266027 56266467 + 1.81053432848961 NA intron (NM_172924, intron 3 of 6) intron (NM_172924, intron 3 of 6) -105177 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961 chr13 92041900 92042335 + 1.81053432848961 NA Intergenic Intergenic -54075 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-8 chr5 76303785 76304206 + 1.81053432848961 NA promoter-TSS (NM_001305222) promoter-TSS (NM_001305222) -493 NM_001305222 12753 Mm.3552 NM_007715 ENSMUSG00000029238 Clock 5330400M04Rik|KAT13D circadian locomotor output cycles kaput protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-6 chr19 53017944 53018308 + 1.81053432848961 NA intron (NM_133216, intron 3 of 20) intron (NM_133216, intron 3 of 20) -7370 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961 chr11 32225390 32225714 + 1.81053432848961 NA promoter-TSS (NM_010822) promoter-TSS (NM_010822) -953 NM_010822 268395 Mm.263161 NM_010822 ENSMUSG00000020287 Mpg 9830006D05|AI326268|APNG|Aag|Mid1 N-methylpurine-DNA glycosylase protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-2 chr11 72467295 72467545 + 1.81053432848961 NA intron (NM_153060, intron 2 of 12) intron (NM_153060, intron 2 of 12) 7607 NM_001276383 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961-6 chr8 36742504 36742791 + 1.81053432848961 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -9593 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-9 chr6 142287479 142287927 + 1.81053432848961 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) -8829 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961 chr11 83810333 83810851 + 1.81053432848961 NA Intergenic Intergenic -40277 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-4 chr13 60737798 60738602 + 1.81053432848961 NA intron (NM_134062, intron 18 of 26) intron (NM_134062, intron 18 of 26) 48164 NM_199148 218275 Mm.222427 NM_199148 ENSMUSG00000042243 BC051665 - cDNA sequence BC051665 protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961-4 chr4 55349421 55349692 + 1.81053432848961 NA promoter-TSS (NM_009011) promoter-TSS (NM_009011) -486 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961 chr14 76739043 76739405 + 1.81053432848961 NA Intergenic Intergenic -20907 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_32_11_1.1821034836766_4.17601424255946_1.81053432848961 chr3 9002576 9002897 + 1.81053432848961 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 1468 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-7 chr2 173320804 173321206 + 1.81053432848961 NA Intergenic Intergenic -44472 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-5 chr15 96773325 96773711 + 1.81053432848961 NA Intergenic Intergenic -73790 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961-7 chr9 122351170 122351616 + 1.81053432848961 NA promoter-TSS (NM_026179) promoter-TSS (NM_026179) -223 NR_152865 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961-2 chr18 35553412 35553883 + 1.81053432848961 NA promoter-TSS (NR_035472) promoter-TSS (NR_035472) 237 NR_038073 100503380 Mm.482118 NR_038073 ENSMUSG00000097769 Snhg4 Gm17457 small nucleolar RNA host gene 4 ncRNA unique_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-3 chr11 96313827 96314313 + 1.81053432848961 NA Intergenic Intergenic -3095 NR_029784 723893 NR_029784 ENSMUSG00000065519 Mir10a Mirn10a|miR-10a|mmu-mir-10a microRNA 10a ncRNA common_peak1_32_11_1.1821034836766_4.17601424255946_1.81053432848961-2 chr2 157377146 157377477 + 1.81053432848961 NA intron (NM_026968, intron 1 of 2) intron (NM_026968, intron 1 of 2) 9717 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961-5 chr5 57869065 57869507 + 1.81053432848961 NA intron (NM_001310608, intron 1 of 3) intron (NM_001310608, intron 1 of 3) 151205 NM_018764 54216 Mm.332387 NM_018764 ENSMUSG00000029108 Pcdh7 - protocadherin 7 protein-coding unique_peak2_12_27_-1.37476176802925_4.11997403804298_1.81053432848961-3 chr2 30952924 30953226 + 1.81053432848961 NA promoter-TSS (NM_133673) promoter-TSS (NM_133673) 74 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding common_peak1_51_71_-0.751441806560443_5.79420409816209_1.80978279797655 chr5 88554550 88555196 + 1.80978279797655 NA exon (NM_023054, exon 1 of 1) exon (NM_023054, exon 1 of 1) 411 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak2_51_71_-0.751441806560443_5.79420409816209_1.80978279797655 chr5 118154900 118155363 + 1.80978279797655 NA exon (NM_172721, exon 1 of 11) exon (NM_172721, exon 1 of 11) 327 NM_172721 231672 Mm.221769 NM_172721 ENSMUSG00000032867 Fbxw8 4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29 F-box and WD-40 domain protein 8 protein-coding common_peak2_86_43_0.696317004967423_5.80759012112101_1.80978279797654-2 chr3 90611416 90612113 + 1.80978279797654 NA TTS (NM_011312) TTS (NM_011312) -1130 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_86_43_0.696317004967423_5.80759012112101_1.80978279797654 chr5 92840558 92841568 + 1.80978279797654 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 31681 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_86_43_0.696317004967423_5.80759012112101_1.80978279797654 chr15 66890365 66890896 + 1.80978279797654 NA promoter-TSS (NM_018865) promoter-TSS (NM_018865) -763 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_136_76_0.539429033420879_6.53650105740534_1.80724507132105 chr18 46280037 46281319 + 1.80724507132105 NA intron (NM_172627, intron 1 of 8) CpG 172 NM_172627 225467 Mm.262096 NM_172627 ENSMUSG00000024477 Pggt1b 2010207C17Rik|2610100E13|AI451237|AI551093|BGG1|GGT1 protein geranylgeranyltransferase type I, beta subunit protein-coding common_peak1_92_112_-0.568893820634951_6.53573205209771_1.80724507132102 chr4 151056885 151057961 + 1.80724507132102 NA intron (NM_009498, intron 1 of 4) intron (NM_009498, intron 1 of 4) 530 NM_009498 22319 Mm.273930 NM_009498 ENSMUSG00000028955 Vamp3 D130027G05Rik|VAMP-3|ceb vesicle-associated membrane protein 3 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-50 chr7 145141621 145141833 + 1.80617997398389 NA Intergenic Intergenic 66392 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-24 chr15 80673346 80673595 + 1.80617997398389 NA intron (NM_145986, intron 1 of 4) RSINE1|SINE|B4 1623 NM_145986 213956 Mm.132439 NM_145986 ENSMUSG00000022408 Fam83f AW544981 family with sequence similarity 83, member F protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-38 chr3 136454469 136454672 + 1.80617997398389 NA Intergenic Intergenic -5221 NR_040592 70055 Mm.261063 NR_040592 ENSMUSG00000099508 1700030L20Rik - RIKEN cDNA 1700030L20 gene ncRNA unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-18 chr9 102353564 102353803 + 1.80617997398389 NA intron (NM_173447, intron 1 of 15) CpG 1010 NM_173447 270190 Mm.22897 NM_173447 ENSMUSG00000032537 Ephb1 9330129L11|AW488255|C130099E04Rik|Cek6|Elk|Elkh|Hek6|Net Eph receptor B1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-41 chr5 3539354 3539555 + 1.80617997398389 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -4379 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-5 chr18 62547055 62547280 + 1.80617997398389 NA intron (NM_001361089, intron 1 of 22) intron (NM_001361089, intron 1 of 22) 1696 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-17 chr2 180704775 180704966 + 1.80617997398389 NA intron (NM_001291432, intron 1 of 5) intron (NM_001291432, intron 1 of 5) -2768 NM_175551 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-20 chr5 92827803 92828000 + 1.80617997398389 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 18519 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-4 chr11 60304451 60304640 + 1.80617997398389 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 48360 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-55 chr8 94308855 94309043 + 1.80617997398389 NA exon (NM_001357266, exon 18 of 22) exon (NM_001357266, exon 18 of 22) -15362 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-48 chr7 84270778 84270965 + 1.80617997398389 NA intron (NM_007488, intron 12 of 18) MIRb|SINE|MIR -118978 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-26 chr7 118721614 118721820 + 1.80617997398389 NA exon (NM_001360794, exon 5 of 15) exon (NM_001360794, exon 5 of 15) 9174 NM_182995 101565 Mm.23279 NM_182995 ENSMUSG00000033904 Ccp110 6330503K22Rik|AA415922|AI427129|AW557948|CP110|cep110 centriolar coiled coil protein 110 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-7 chr1 167279110 167279300 + 1.80617997398389 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 5922 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389 chr13 17290143 17290363 + 1.80617997398389 NA intron (NM_138654, intron 11 of 13) GA-rich|Low_complexity|Low_complexity 404512 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-16 chr12 72763075 72763318 + 1.80617997398389 NA intron (NM_008910, intron 1 of 5) intron (NM_008910, intron 1 of 5) 1985 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-9 chr19 59753622 59753830 + 1.80617997398389 NA Intergenic Intergenic 189638 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-6 chr18 63856279 63856513 + 1.80617997398389 NA intron (NM_001014981, intron 20 of 27) intron (NM_001014981, intron 20 of 27) 147701 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389 chr1 33732436 33732625 + 1.80617997398389 NA intron (NM_001159729, intron 4 of 7) intron (NM_001159729, intron 4 of 7) 12111 NM_001159729 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-42 chr5 64869957 64870200 + 1.80617997398389 NA Intergenic Intergenic 62621 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-49 chr7 84419519 84419711 + 1.80617997398389 NA Intergenic Intergenic -9577 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-2 chr15 10660788 10661004 + 1.80617997398389 NA intron (NM_001356534, intron 2 of 16) MLT1G3|LTR|ERVL-MaLR 52644 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-7 chr13 80964851 80965046 + 1.80617997398389 NA intron (NR_015587, intron 1 of 1) intron (NR_015587, intron 1 of 1) 874 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-14 chr6 108670522 108670728 + 1.80617997398389 NA Intergenic Intergenic -9691 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-28 chr18 39711240 39711485 + 1.80617997398389 NA Intergenic Intergenic -62135 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-12 chr17 6154619 6154830 + 1.80617997398389 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 16576 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-2 chr15 7843566 7843790 + 1.80617997398389 NA Intergenic Intergenic 28128 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-36 chr3 92608616 92608826 + 1.80617997398389 NA Intergenic Intergenic 12939 NM_001166172 78382 Mm.235474 NM_001166172 ENSMUSG00000086848 Lce6a 2210420J11Rik late cornified envelope 6A protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-43 chr5 113249744 113249977 + 1.80617997398389 NA intron (NM_172718, intron 24 of 24) intron (NM_172718, intron 24 of 24) 22951 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-15 chr12 8336463 8336703 + 1.80617997398389 NA intron (NM_021429, intron 5 of 6) intron (NM_021429, intron 5 of 6) 23150 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-22 chr6 32964794 32964990 + 1.80617997398389 NA intron (NM_001355667, intron 4 of 8) intron (NM_001355667, intron 4 of 8) 95368 NM_001355667 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-19 chr13 63307302 63307506 + 1.80617997398389 NA intron (NM_001042673, intron 15 of 15) ID_B1|SINE|B4 -6121 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-3 chr16 26012810 26013015 + 1.80617997398389 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 92872 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-15 chr2 29720428 29720674 + 1.80617997398389 NA intron (NM_001039087, intron 13 of 25) intron (NM_001039087, intron 13 of 25) -40977 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-2 chr10 28429515 28429799 + 1.80617997398389 NA intron (NM_001359356, intron 7 of 30) intron (NM_001359356, intron 7 of 30) -238703 NM_001305663 210757 Mm.123021 NM_178666 ENSMUSG00000049109 Themis E430004N04Rik|Gasp|Spot|Tsepa|thylex thymocyte selection associated protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-8 chr10 7726964 7727171 + 1.80617997398389 NA intron (NM_011835, intron 1 of 10) (TC)n|Simple_repeat|Simple_repeat 1067 NM_011835 23924 Mm.28127 NM_011835 ENSMUSG00000019794 Katna1 - katanin p60 (ATPase-containing) subunit A1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-20 chr14 20177029 20177269 + 1.80617997398389 NA intron (NM_021542, intron 1 of 4) B2_Mm2|SINE|B2 4633 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-7 chr7 28569535 28569731 + 1.80617997398389 NA intron (NM_027470, intron 2 of 9) intron (NM_027470, intron 2 of 9) -8649 NR_106016 102466795 NR_106016 ENSMUSG00000098558 Mir7049 Gm27277|mmu-mir-7049 microRNA 7049 ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-29 chr18 68017138 68017368 + 1.80617997398389 NA intron (NM_172631, intron 1 of 5) B1F|SINE|Alu 84080 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-18 chr3 101320879 101321092 + 1.80617997398389 NA Intergenic Intergenic -33046 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-58 chr9 71768558 71768772 + 1.80617997398389 NA intron (NM_026599, intron 1 of 18) RSINE1|SINE|B4 2937 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-12 chr4 137759187 137759394 + 1.80617997398389 NA intron (NM_007431, intron 1 of 11) PB1D10|SINE|Alu 7185 NM_001287172 11647 Mm.288186 NM_007431 ENSMUSG00000028766 Alpl ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-10 chr2 158271574 158271832 + 1.80617997398389 NA intron (NM_001356542, intron 7 of 14) intron (NM_001356542, intron 7 of 14) 13462 NM_001356542 329547 Mm.260883 NM_177850 ENSMUSG00000052922 Bpi 9230105K17Rik|Bpifd1 bactericidal permeablility increasing protein protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-23 chr15 63728574 63728782 + 1.80617997398389 NA Intergenic Intergenic 80061 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-28 chr8 104434834 104435055 + 1.80617997398389 NA intron (NM_001013380, intron 4 of 12) intron (NM_001013380, intron 4 of 12) 8103 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-4 chr17 17847209 17847422 + 1.80617997398389 NA intron (NM_008215, intron 4 of 4) intron (NM_008215, intron 4 of 4) 7873 NM_008215 15116 Mm.255701 NM_008215 ENSMUSG00000003665 Has1 HAS hyaluronan synthase 1 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-8 chr7 134234036 134234264 + 1.80617997398389 NA Intergenic PB1D7|SINE|Alu -9053 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-16 chr8 53628638 53628879 + 1.80617997398389 NA intron (NM_146208, intron 1 of 9) RLTR17B_Mm|LTR|ERVK 10307 NM_146208 234258 Mm.281749 NM_146208 ENSMUSG00000039396 Neil3 AI449477|BC034753|C85903 nei like 3 (E. coli) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-30 chr18 69675926 69676122 + 1.80617997398389 NA intron (NM_001361128, intron 16 of 19) intron (NM_001361128, intron 16 of 19) -249535 NM_201362 381175 Mm.266831 NM_201362 ENSMUSG00000038903 Ccdc68 BC046343 coiled-coil domain containing 68 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-39 chr4 152006865 152007115 + 1.80617997398389 NA Intergenic B1_Mur1|SINE|Alu -1901 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-5 chr11 117203917 117204114 + 1.80617997398389 NA intron (NM_001113486, intron 1 of 11) intron (NM_001113486, intron 1 of 11) 4354 NM_001113486 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-18 chr13 55484974 55485189 + 1.80617997398389 NA intron (NM_001177371, intron 1 of 14) intron (NM_001177371, intron 1 of 14) 2995 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-11 chr10 93295638 93295937 + 1.80617997398389 NA intron (NM_001322265, intron 1 of 4) B3|SINE|B2 15372 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-26 chr17 45431396 45431622 + 1.80617997398389 NA intron (NM_152810, intron 1 of 15) intron (NM_152810, intron 1 of 15) 2198 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-17 chr13 34075138 34075341 + 1.80617997398389 NA exon (NM_009450, exon 4 of 4) exon (NM_009450, exon 4 of 4) 2769 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-4 chr1 153104062 153104281 + 1.80617997398389 NA intron (NM_175460, intron 8 of 10) intron (NM_175460, intron 8 of 10) 82276 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-44 chr6 86547740 86547950 + 1.80617997398389 NA intron (NR_037961, intron 3 of 4) intron (NR_037961, intron 3 of 4) 20444 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-25 chr7 49764985 49765181 + 1.80617997398389 NA intron (NM_001146053, intron 3 of 5) intron (NM_001146053, intron 3 of 5) 5571 NM_001146052 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-8 chr14 52164504 52164700 + 1.80617997398389 NA intron (NM_033618, intron 22 of 25) intron (NM_033618, intron 22 of 25) 32637 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-59 chr9 108222332 108222565 + 1.80617997398389 NA intron (NM_001276485, intron 1 of 2) intron (NM_001276485, intron 1 of 2) -32065 NM_007567 12217 Mm.20425 NM_007567 ENSMUSG00000032589 Bsn - bassoon protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-3 chr1 150461031 150461223 + 1.80617997398389 NA intron (NM_001110146, intron 3 of 11) intron (NM_001110146, intron 3 of 11) 5038 NM_001110146 96875 Mm.174256 NM_021400 ENSMUSG00000006014 Prg4 CACP|DOL54|JCAP|MSF|SZP|lubricin proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-27 chr18 7705180 7705408 + 1.80617997398389 NA Intergenic PB1D10|SINE|Alu -78431 NM_001161620 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-8 chr19 29254650 29254882 + 1.80617997398389 NA intron (NM_008413, intron 2 of 24) intron (NM_008413, intron 2 of 24) 2963 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-5 chr3 96838861 96839100 + 1.80617997398389 NA intron (NM_001146001, intron 1 of 8) B2_Mm1a|SINE|B2 6306 NM_001146001 59020 Mm.489677 NM_021517 ENSMUSG00000038298 Pdzk1 1700023D20Rik|2610507N21Rik|4921513F16Rik|AI267131|AI314638|AL022680|D3Ertd537e|NHERF-3|Pdzd1|mPDZK1|naPi-Cap1 PDZ domain containing 1 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-10 chr16 24948201 24948413 + 1.80617997398389 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -111332 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-40 chr4 154249911 154250103 + 1.80617997398389 NA intron (NM_001162977, intron 6 of 36) intron (NM_001162977, intron 6 of 36) 49888 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-15 chr8 24496506 24496707 + 1.80617997398389 NA Intergenic Intergenic -11620 NR_035483 unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-29 chr9 50774100 50774294 + 1.80617997398389 NA Intergenic Intergenic -1028 NM_133981 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-33 chr3 58581188 58581384 + 1.80617997398389 NA intron (NM_001040396, intron 1 of 5) intron (NM_001040396, intron 1 of 5) 4650 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-37 chr3 122042060 122042254 + 1.80617997398389 NA Intergenic B1_Mus1|SINE|Alu -2303 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-10 chr10 10628974 10629169 + 1.80617997398389 NA Intergenic Intergenic 23126 NR_033630 382450 Mm.422788 NR_033630 ENSMUSG00000098065 Gm5177 EG382450 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-13 chr17 82890339 82890531 + 1.80617997398389 NA Intergenic Intergenic 187790 NR_045094 100503434 Mm.187281 NR_045094 Gm19689 - predicted gene, 19689 ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-35 chr3 92492707 92492934 + 1.80617997398389 NA Intergenic Intergenic -6939 NM_009264 20753 Mm.331191 NM_009264 ENSMUSG00000050359 Sprr1a AI528815|SPR1a|mSPRR1A small proline-rich protein 1A protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-25 chr16 30487038 30487230 + 1.80617997398389 NA Intergenic Intergenic 63444 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-51 chr7 145311478 145311667 + 1.80617997398389 NA Intergenic Intergenic -3263 NM_203490 211578 Mm.370299 NM_203490 ENSMUSG00000051207 Mrgprd Gm499|Mgrd|MrgD|TGR7 MAS-related GPR, member D protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-13 chr11 95005138 95005389 + 1.80617997398389 NA intron (NM_172261, intron 9 of 9) intron (NM_172261, intron 9 of 9) -4616 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-16 chr2 38540622 38540895 + 1.80617997398389 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 28882 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389 chr12 109439780 109439985 + 1.80617997398389 NA Intergenic Intergenic -12941 NR_033813 13386 Mm.157069 NM_010052 ENSMUSG00000040856 Dlk1 AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1 delta like non-canonical Notch ligand 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-32 chr2 173223217 173223534 + 1.80617997398389 NA Intergenic Intergenic -4453 NM_001139519 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-17 chr8 123868389 123868646 + 1.80617997398389 NA Intergenic ID_B1|SINE|B4 -8308 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-2 chr1 138587808 138588029 + 1.80617997398389 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 31839 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-6 chr1 161964145 161964339 + 1.80617997398389 NA intron (NM_001204904, intron 3 of 6) intron (NM_001204904, intron 3 of 6) 4906 NM_001204905 75368 Mm.108728 NM_001204904 ENSMUSG00000086277 4930558K02Rik - RIKEN cDNA 4930558K02 gene protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-21 chr5 114708450 114708672 + 1.80617997398389 NA intron (NM_029992, intron 1 of 12) intron (NM_029992, intron 1 of 12) 782 NM_029992 77832 Mm.239698 NM_029992 ENSMUSG00000002486 Tchp A930031F18Rik|AV279199 trichoplein, keratin filament binding protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-27 chr8 70138223 70138431 + 1.80617997398389 NA intron (NM_001025589, intron 1 of 8) RSINE1|SINE|B4 870 NM_011266 19727 Mm.161167 NM_011266 ENSMUSG00000036120 Rfxank Tvl1 regulatory factor X-associated ankyrin-containing protein protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-6 chr6 134462793 134463144 + 1.80617997398389 NA intron (NM_008514, intron 16 of 22) B1_Mus2|SINE|Alu 48540 NM_001355686 66813 Mm.474472 NM_025778 ENSMUSG00000030200 Bcl2l14 4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg BCL2-like 14 (apoptosis facilitator) protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-3 chr10 95644469 95644679 + 1.80617997398389 NA Intergenic B1_Mus1|SINE|Alu -80428 NM_001358996 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-45 chr6 144583867 144584076 + 1.80617997398389 NA Intergenic Intergenic -88897 NR_040519 66760 Mm.233631 NR_040519 ENSMUSG00000085785 Sox5os3 4933425H06Rik SRY (sex determining region Y)-box 5, opposite strand 3 ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-9 chr10 8798021 8798219 + 1.80617997398389 NA intron (NM_175155, intron 4 of 19) intron (NM_175155, intron 4 of 19) 87950 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-11 chr4 20041551 20041765 + 1.80617997398389 NA promoter-TSS (NM_010281) promoter-TSS (NM_010281) -394 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-7 chr18 80653760 80654029 + 1.80617997398389 NA intron (NM_198429, intron 6 of 9) intron (NM_198429, intron 6 of 9) 54279 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding unique_peak2_0_7_-3.24174003748923_1.37912998125539_1.80617997398389-13 chr6 21960312 21960519 + 1.80617997398389 NA intron (NM_001311061, intron 4 of 11) intron (NM_001311061, intron 4 of 11) 10800 NM_023626 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-52 chr8 34906252 34906471 + 1.80617997398389 NA intron (NM_175091, intron 3 of 26) intron (NM_175091, intron 3 of 26) 59329 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-57 chr9 70244385 70244706 + 1.80617997398389 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 37195 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-19 chr4 9028425 9028632 + 1.80617997398389 NA Intergenic Intergenic -240765 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-34 chr3 64013794 64014017 + 1.80617997398389 NA intron (NM_001033300, intron 13 of 15) intron (NM_001033300, intron 13 of 15) 37762 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-6 chr12 72731496 72731684 + 1.80617997398389 NA Intergenic Intergenic -29621 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-56 chr9 62776574 62776851 + 1.80617997398389 NA exon (NM_176922, exon 27 of 30) exon (NM_176922, exon 27 of 30) 34936 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-10 chr9 76539929 76540121 + 1.80617997398389 NA intron (NM_001045518, intron 2 of 4) intron (NM_001045518, intron 2 of 4) 27090 NM_001045518 208994 Mm.256929 NM_001045518 ENSMUSG00000032358 Fam83b C530008M07Rik|Gm516 family with sequence similarity 83, member B protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-3 chr15 28081806 28082051 + 1.80617997398389 NA Intergenic B3A|SINE|B2 -56080 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-22 chr14 118751628 118751831 + 1.80617997398389 NA Intergenic B3A|SINE|B2 -36142 NM_001160098 58187 Mm.390755 NM_021386 ENSMUSG00000022132 Cldn10 6720456I16Rik|Cldn10a|Cldn10b|D14Ertd728e claudin 10 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-31 chr2 91324930 91325128 + 1.80617997398389 NA intron (NM_175123, intron 3 of 8) intron (NM_175123, intron 3 of 8) 59914 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-12 chr10 97389577 97389825 + 1.80617997398389 NA Intergenic Intergenic -33777 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-53 chr8 60775836 60776029 + 1.80617997398389 NA Intergenic Intergenic -114461 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-46 chr7 19310575 19310783 + 1.80617997398389 NA promoter-TSS (NM_008036) promoter-TSS (NM_008036) -634 NM_001347586 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-24 chr7 30560020 30560236 + 1.80617997398389 NA promoter-TSS (NM_001290569) promoter-TSS (NM_001290569) -482 NM_001290569 75660 Mm.379242 NM_029377 ENSMUSG00000036845 Lin37 1810054G18Rik lin-37 homolog (C. elegans) protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-5 chr1 153265529 153265746 + 1.80617997398389 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 67149 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-11 chr16 45797083 45797273 + 1.80617997398389 NA intron (NM_153412, intron 5 of 17) intron (NM_153412, intron 5 of 17) 47200 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-11 chr9 96737942 96738133 + 1.80617997398389 NA intron (NR_015511, intron 2 of 3) intron (NR_015511, intron 2 of 3) -6362 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-4 chr2 151897805 151898057 + 1.80617997398389 NA Intergenic ID_B1|SINE|B4 -13276 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-14 chr11 118187429 118187656 + 1.80617997398389 NA intron (NM_001112700, intron 3 of 12) intron (NM_001112700, intron 3 of 12) 25200 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-9 chr16 11049998 11050232 + 1.80617997398389 NA Intergenic L1MC5|LINE|L1 -16183 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding unique_peak1_5_0_2.32498560559174_1.16249280279587_1.80617997398389-9 chr8 40964647 40964858 + 1.80617997398389 NA intron (NM_026840, intron 2 of 5) intron (NM_026840, intron 2 of 5) 38519 NM_026840 68797 Mm.284246 NM_026840 ENSMUSG00000031595 Pdgfrl 1110039P19Rik|AV013190 platelet-derived growth factor receptor-like protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389 chr1 189780167 189780354 + 1.80617997398389 NA intron (NM_008976, intron 1 of 18) PB1D10|SINE|Alu 51992 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-23 chr6 124760880 124761068 + 1.80617997398389 NA 3' UTR (NM_001302642, exon 10 of 10) 3' UTR (NM_001302642, exon 10 of 10) -4487 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-47 chr7 49075645 49075861 + 1.80617997398389 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 86405 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA unique_peak1_7_1_1.73709502379104_1.86854751189552_1.80617997398389-14 chr18 38134773 38134995 + 1.80617997398389 NA Intergenic Intergenic 74878 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-54 chr8 70470941 70471198 + 1.80617997398389 NA intron (NM_178771, intron 1 of 2) B1_Mur4|SINE|Alu 5874 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-21 chr14 99450686 99450903 + 1.80617997398389 NA Intergenic Intergenic 152103 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak1_8_1_1.90582120781919_1.9529106039096_1.80617997398389-60 chr9 123506627 123506923 + 1.80617997398389 NA intron (NM_013860, intron 2 of 7) intron (NM_013860, intron 2 of 7) -22978 NM_001357485 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_122_67_0.564332328577554_6.36962900553912_1.80558047027012 chr2 31245438 31247019 + 1.80558047027012 NA exon (NM_019681, exon 1 of 8) exon (NM_019681, exon 1 of 8) 305 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak1_174_191_-0.428059568567962_7.37093271643718_1.80415513419088 chr10 108445048 108447064 + 1.80415513419088 NA Intergenic Intergenic 113867 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_369_239_0.32256210548307_8.06817164835005_1.80332796540126 chr19 44741012 44742968 + 1.80332796540126 NA Intergenic Intergenic -15404 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239-3 chr13 70799704 70800168 + 1.80321929531239 NA intron (NM_172053, intron 4 of 22) intron (NM_172053, intron 4 of 22) 41875 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak2_17_33_-1.18869661300439_4.49311453474814_1.80321929531239 chr11 5863776 5864370 + 1.80321929531239 NA exon (NM_001291857, exon 2 of 21) exon (NM_001291857, exon 2 of 21) 2207 NM_001291857 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239 chr1 182511401 182511735 + 1.80321929531239 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 6042 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_39_15_1.04264196339843_4.52132098169922_1.80321929531239 chr3 88914108 88914476 + 1.80321929531239 NA promoter-TSS (NM_144898) promoter-TSS (NM_144898) -342 NM_144898 229524 Mm.440405 NM_144898 ENSMUSG00000068922 Msto1 BC008103|mst misato 1, mitochondrial distribution and morphology regulator protein-coding unique_peak2_17_33_-1.18869661300439_4.49311453474814_1.80321929531239 chr10 12808493 12809108 + 1.80321929531239 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 52935 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_17_33_-1.18869661300439_4.49311453474814_1.80321929531239-4 chr9 65016216 65016561 + 1.80321929531239 NA intron (NM_021345, intron 1 of 10) B1_Mus1|SINE|Alu 5329 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding unique_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239-6 chr4 129055439 129055984 + 1.80321929531239 NA Intergenic PB1D10|SINE|Alu -2560 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_39_15_1.04264196339843_4.52132098169922_1.80321929531239-2 chr6 120483118 120483476 + 1.80321929531239 NA 3' UTR (NM_008359, exon 13 of 13) 3' UTR (NM_008359, exon 13 of 13) 10510 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Tmem121b AW048664|Cecr6 transmembrane protein 121B protein-coding common_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239 chr3 122482106 122482527 + 1.80321929531239 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -1253 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_17_33_-1.18869661300439_4.49311453474814_1.80321929531239-2 chr7 6363128 6363580 + 1.80321929531239 NA promoter-TSS (NM_001025163) promoter-TSS (NM_001025163) 46 NM_001112805 330463 Mm.136456 NM_177888 ENSMUSG00000055150 Zfp78 A330079D15|KRAB12|Zfp77 zinc finger protein 78 protein-coding unique_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239-4 chr2 163820979 163821493 + 1.80321929531239 NA intron (NM_016873, intron 1 of 4) intron (NM_016873, intron 1 of 4) 402 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak2_17_33_-1.18869661300439_4.49311453474814_1.80321929531239-3 chr18 75462153 75462519 + 1.80321929531239 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -52309 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239-5 chr3 89898874 89899563 + 1.80321929531239 NA intron (NM_010559, intron 1 of 9) intron (NM_010559, intron 1 of 9) 13978 NM_001310676 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding unique_peak2_17_33_-1.18869661300439_4.49311453474814_1.80321929531239-2 chr16 85152867 85153580 + 1.80321929531239 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 20484 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239-2 chr7 99827646 99828227 + 1.80321929531239 NA intron (NM_016720, intron 1 of 2) intron (NM_016720, intron 1 of 2) 481 NM_016720 50877 Mm.103703 NM_016720 ENSMUSG00000035239 Neu3 - neuraminidase 3 protein-coding unique_peak1_39_15_1.04264196339843_4.52132098169922_1.80321929531239-2 chr11 83462416 83462948 + 1.80321929531239 NA intron (NM_080453, intron 1 of 7) intron (NM_080453, intron 1 of 7) 358 NM_172797 118453 Mm.264648 NM_080453 ENSMUSG00000020682 Mmp28 D130023P12 matrix metallopeptidase 28 (epilysin) protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-36 chr4 45508455 45508811 + 1.80287260729378 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 22195 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-44 chr8 4251281 4251486 + 1.80287260729378 NA TTS (NM_001195258) TTS (NM_001195258) -1719 NM_133968 102209 Mm.28452 NM_133968 ENSMUSG00000011837 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-3 chr1 71765178 71765517 + 1.80287260729378 NA Intergenic Intergenic 112012 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-7 chr12 79715421 79715656 + 1.80287260729378 NA intron (NM_009014, intron 8 of 10) intron (NM_009014, intron 8 of 10) 209195 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-2 chr15 58133970 58134271 + 1.80287260729378 NA intron (NM_027435, intron 1 of 27) intron (NM_027435, intron 1 of 27) 962 NM_027435 70472 Mm.221758 NM_027435 ENSMUSG00000022360 Atad2 2610509G12Rik ATPase family, AAA domain containing 2 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-6 chr10 41810684 41811113 + 1.80287260729378 NA 5' UTR (NM_001162908, exon 1 of 10) 5' UTR (NM_001162908, exon 1 of 10) 324 NM_001162908 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-39 chr8 78798265 78798569 + 1.80287260729378 NA Intergenic B1_Mur1|SINE|Alu 22735 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-15 chr6 94606085 94606417 + 1.80287260729378 NA TTS (NR_106008) TTS (NR_106008) 164 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA common_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-4 chr2 120134417 120134678 + 1.80287260729378 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 20028 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-14 chr15 25915969 25916233 + 1.80287260729378 NA intron (NM_001034851, intron 3 of 8) intron (NM_001034851, intron 3 of 8) -17451 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-6 chr12 4593955 4594271 + 1.80287260729378 NA intron (NM_001198969, intron 1 of 16) intron (NM_001198969, intron 1 of 16) 1105 NM_001198968 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-21 chr19 34717120 34717490 + 1.80287260729378 NA intron (NM_172838, intron 1 of 6) intron (NM_172838, intron 1 of 6) 29806 NM_172838 240638 Mm.74636 NM_172838 ENSMUSG00000009378 Slc16a12 3230401A21|AW210596 solute carrier family 16 (monocarboxylic acid transporters), member 12 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-19 chr18 66333597 66333997 + 1.80287260729378 NA Intergenic Intergenic -41959 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-4 chr1 75478364 75478632 + 1.80287260729378 NA intron (NM_001001565, intron 1 of 4) intron (NM_001001565, intron 1 of 4) 973 NM_001001566 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-18 chr18 56491107 56491407 + 1.80287260729378 NA intron (NM_001360917, intron 11 of 13) intron (NM_001360917, intron 11 of 13) -46882 NR_106160 102465790 NR_106160 ENSMUSG00000099196 Mir1258 Gm27371|mmu-mir-1258 microRNA 1258 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-34 chr7 5018189 5018534 + 1.80287260729378 NA exon (NM_025324, exon 2 of 2) exon (NM_025324, exon 2 of 2) -2015 NM_001290426 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-27 chr5 30907937 30908188 + 1.80287260729378 NA promoter-TSS (NM_024460) promoter-TSS (NM_024460) -274 NM_024460 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-28 chr2 85097065 85097375 + 1.80287260729378 NA Intergenic Intergenic -10759 NR_040504 74687 Mm.66996 NR_040504 ENSMUSG00000086969 4930443O20Rik - RIKEN cDNA 4930443O20 gene ncRNA unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-17 chr16 44685061 44685415 + 1.80287260729378 NA Intergenic Intergenic -39063 NM_145972 212547 Mm.310573 NM_145972 ENSMUSG00000036208 Nepro - nucleolus and neural progenitor protein protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-33 chr3 96420335 96420580 + 1.80287260729378 NA Intergenic Intergenic -5624 NR_001579 21748 NR_001579 ENSMUSG00000064796 Terc mTER|mTR telomerase RNA component ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-5 chr11 116139322 116139698 + 1.80287260729378 NA promoter-TSS (NM_024177) promoter-TSS (NM_024177) -642 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-12 chr15 13141679 13142014 + 1.80287260729378 NA intron (NM_007666, intron 1 of 11) intron (NM_007666, intron 1 of 11) 31829 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-14 chr6 29659350 29659667 + 1.80287260729378 NA Intergenic Intergenic -34706 NM_001301407 232670 Mm.225289 NM_146173 ENSMUSG00000001763 Tspan33 1300010A20Rik|Pen tetraspanin 33 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-25 chr18 64750372 64750890 + 1.80287260729378 NA Intergenic Intergenic -89631 NM_001001488 54670 Mm.270043 NM_001001488 ENSMUSG00000039529 Atp8b1 AI451886|FIC1|Ic ATPase, class I, type 8B, member 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-43 chr7 139819711 139820015 + 1.80287260729378 NA Intergenic Intergenic -14311 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-21 chr17 87248743 87249072 + 1.80287260729378 NA Intergenic Intergenic 17040 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-23 chr18 60604698 60605007 + 1.80287260729378 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 5252 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-48 chrX 159256748 159257165 + 1.80287260729378 NA intron (NM_148945, intron 1 of 21) intron (NM_148945, intron 1 of 21) 1174 NM_001346675 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-5 chr19 4860051 4860350 + 1.80287260729378 NA intron (NM_019861, intron 12 of 13) intron (NM_019861, intron 12 of 13) 5071 NM_019861 56464 Mm.29561 NM_019861 ENSMUSG00000083282 Ctsf AI481912 cathepsin F protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-30 chr2 167572045 167572316 + 1.80287260729378 NA Intergenic Intergenic 33985 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-36 chr7 98817292 98817613 + 1.80287260729378 NA Intergenic Intergenic -17660 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-15 chr17 24632743 24632988 + 1.80287260729378 NA promoter-TSS (NM_001286720) promoter-TSS (NM_001286720) 183 NM_008743 18207 Mm.148315 NM_008743 ENSMUSG00000041429 Nthl1 Nth1|Octs3 nth (endonuclease III)-like 1 (E.coli) protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-34 chr3 102657182 102657636 + 1.80287260729378 NA Intergenic Intergenic -77361 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-33 chr6 142365045 142365355 + 1.80287260729378 NA intron (NM_001355511, intron 12 of 14) intron (NM_001355511, intron 12 of 14) 19503 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-8 chr13 23431718 23431940 + 1.80287260729378 NA promoter-TSS (NR_015492) promoter-TSS (NR_015492) -812 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-13 chr15 36189280 36189610 + 1.80287260729378 NA intron (NM_012031, intron 4 of 18) intron (NM_012031, intron 4 of 18) 9915 NM_012031 26942 Mm.295539 NM_012031 ENSMUSG00000037617 Spag1 tpis sperm associated antigen 1 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378 chr11 115173606 115173978 + 1.80287260729378 NA intron (NM_012030, intron 1 of 5) intron (NM_012030, intron 1 of 5) 10451 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-24 chr3 98336256 98336567 + 1.80287260729378 NA intron (NM_016966, intron 1 of 11) intron (NM_016966, intron 1 of 11) 3558 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-8 chr12 84922355 84922596 + 1.80287260729378 NA intron (NM_178065, intron 17 of 19) intron (NM_178065, intron 17 of 19) -45980 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-13 chr5 134989188 134989496 + 1.80287260729378 NA intron (NR_026907, intron 4 of 4) intron (NR_026907, intron 4 of 4) 3128 NM_009902 12739 Mm.158662 NM_009902 ENSMUSG00000070473 Cldn3 AI182374|Cpetr2|mRVP1 claudin 3 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-45 chr8 89020462 89020736 + 1.80287260729378 NA Intergenic Intergenic -4136 NR_106190 102465899 NR_106190 ENSMUSG00000099078 Mir8110 Gm27571|mmu-mir-8110 microRNA 8110 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-32 chr6 89034800 89035051 + 1.80287260729378 NA Intergenic Intergenic -61185 NR_134978 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-12 chr5 111121092 111121354 + 1.80287260729378 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) 117079 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-17 chr6 134277301 134277731 + 1.80287260729378 NA Intergenic Intergenic -118813 NM_025778 66813 Mm.474472 NM_025778 ENSMUSG00000030200 Bcl2l14 4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg BCL2-like 14 (apoptosis facilitator) protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-4 chr17 70988915 70989292 + 1.80287260729378 NA intron (NM_023402, intron 1 of 3) intron (NM_023402, intron 1 of 3) 1413 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-3 chr15 62116670 62116947 + 1.80287260729378 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 77551 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-40 chr6 88592081 88592482 + 1.80287260729378 NA intron (NM_001278671, intron 4 of 5) intron (NM_001278671, intron 4 of 5) 35167 NM_001278671 74589 Mm.196226 NM_029013 ENSMUSG00000033182 Kbtbd12 4833415F11Rik|4933428M03Rik|Klhdc6 kelch repeat and BTB (POZ) domain containing 12 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-5 chr1 162455276 162455532 + 1.80287260729378 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 22630 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-3 chr10 80948170 80948593 + 1.80287260729378 NA TTS (NM_010319) TTS (NM_010319) 18290 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-8 chr2 167660707 167660958 + 1.80287260729378 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 712 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-47 chrX 20704014 20704292 + 1.80287260729378 NA intron (NM_145628, intron 1 of 20) CpG 244 NM_145628 236733 Mm.34489 NM_145628 ENSMUSG00000031066 Usp11 6230415D12Rik|mKIAA4085 ubiquitin specific peptidase 11 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-15 chr15 59553260 59553570 + 1.80287260729378 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -95239 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-31 chr2 173414299 173414524 + 1.80287260729378 NA Intergenic Intergenic -108181 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-7 chr2 164522381 164522641 + 1.80287260729378 NA Intergenic Intergenic 24986 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-10 chr13 102903992 102904540 + 1.80287260729378 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 144011 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-11 chr4 63496149 63496367 + 1.80287260729378 NA promoter-TSS (NM_028640) promoter-TSS (NM_028640) -267 NM_001008791 73750 Mm.300397 NM_028640 ENSMUSG00000039137 Whrn 1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|Ush2d|wi whirlin protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-31 chr6 29848368 29848668 + 1.80287260729378 NA intron (NM_001171000, intron 1 of 16) intron (NM_001171000, intron 1 of 16) -5223 NM_001347084 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-17 chr17 75349157 75349448 + 1.80287260729378 NA intron (NM_019919, intron 25 of 33) intron (NM_019919, intron 25 of 33) -86603 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-29 chr2 148171131 148171490 + 1.80287260729378 NA Intergenic Intergenic -124341 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-39 chr5 114717956 114718326 + 1.80287260729378 NA intron (NM_029992, intron 9 of 12) intron (NM_029992, intron 9 of 12) -1374 NR_105995 102465622 NR_105995 ENSMUSG00000098656 Mir7028 Gm27674|mmu-mir-7028 microRNA 7028 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-38 chr8 68740615 68740816 + 1.80287260729378 NA Intergenic Intergenic -5569 NM_172753 234356 Mm.334569 NM_172753 ENSMUSG00000036356 Csgalnact1 4732435N03Rik|CSGalNAcT-1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-32 chr2 180700868 180701124 + 1.80287260729378 NA intron (NM_001291432, intron 1 of 5) intron (NM_001291432, intron 1 of 5) 1106 NM_011805 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-26 chr4 126118918 126119330 + 1.80287260729378 NA intron (NM_001145827, intron 3 of 12) intron (NM_001145827, intron 3 of 12) 15167 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-16 chr15 83534863 83535148 + 1.80287260729378 NA intron (NM_007546, intron 1 of 4) intron (NM_007546, intron 1 of 4) 8143 NM_007546 12124 Mm.267006 NM_007546 ENSMUSG00000016758 Bik Biklk|Blk|Nbk BCL2-interacting killer protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-11 chr14 57744034 57744248 + 1.80287260729378 NA intron (NM_015771, intron 1 of 7) intron (NM_015771, intron 1 of 7) 1982 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-20 chr17 73195076 73195371 + 1.80287260729378 NA intron (NM_001081071, intron 4 of 5) intron (NM_001081071, intron 4 of 5) 87238 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-46 chr8 104111142 104111371 + 1.80287260729378 NA intron (NM_009868, intron 1 of 11) intron (NM_009868, intron 1 of 11) -5383 NR_131138 546096 Mm.252264 NR_131138 ENSMUSG00000110053 Gm29682 Gm45664 predicted gene, 29682 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-2 chr10 78714334 78714567 + 1.80287260729378 NA intron (NM_009809, intron 4 of 6) intron (NM_009809, intron 4 of 6) 3843 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-6 chr19 40480340 40480773 + 1.80287260729378 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -29158 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-37 chr4 149877837 149878368 + 1.80287260729378 NA Intergenic Intergenic 76904 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-10 chr3 132866784 132867001 + 1.80287260729378 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 11704 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378 chr1 178218188 178218419 + 1.80287260729378 NA intron (NM_024282, intron 1 of 4) intron (NM_024282, intron 1 of 4) 30886 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-30 chr5 138757527 138757783 + 1.80287260729378 NA intron (NM_001359593, intron 2 of 10) intron (NM_001359593, intron 2 of 10) 2574 NM_001359593 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-7 chr11 44323220 44323454 + 1.80287260729378 NA Intergenic Intergenic -76726 NM_001303244 16160 Mm.239707 NM_008352 ENSMUSG00000004296 Il12b Il-12b|Il-12p40|Il12p40|p40 interleukin 12b protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-22 chr2 21234715 21234943 + 1.80287260729378 NA Intergenic Intergenic 29105 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-37 chr7 99390866 99391191 + 1.80287260729378 NA intron (NM_201352, intron 2 of 17) intron (NM_201352, intron 2 of 17) 9510 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-23 chr2 167792629 167792905 + 1.80287260729378 NA Intergenic Intergenic 101590 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-11 chr13 110921160 110921638 + 1.80287260729378 NA Intergenic Intergenic -17553 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-18 chr16 92825059 92825563 + 1.80287260729378 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 763 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-40 chr9 57250322 57250591 + 1.80287260729378 NA TTS (NM_001014398) TTS (NM_001014398) 12143 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-28 chr5 36483080 36483423 + 1.80287260729378 NA intron (NM_001170454, intron 1 of 1) intron (NM_001170454, intron 1 of 1) 1034 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-9 chr13 104518026 104518243 + 1.80287260729378 NA Intergenic Intergenic 230299 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-2 chr1 92907712 92907956 + 1.80287260729378 NA TTS (NR_138577) TTS (NR_138577) 845 NM_175118 67446 Mm.46179 NM_175118 ENSMUSG00000047067 Dusp28 0710001B24Rik|AV005521 dual specificity phosphatase 28 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-41 chr6 146756471 146756814 + 1.80287260729378 NA intron (NM_001346666, intron 1 of 11) intron (NM_001346666, intron 1 of 11) 31712 NM_172734 232533 Mm.322121 NM_172734 ENSMUSG00000001630 Stk38l 4930473A22Rik|Ndr2|Ndr54 serine/threonine kinase 38 like protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-9 chr3 14890811 14891145 + 1.80287260729378 NA intron (NM_001357334, intron 3 of 7) intron (NM_001357334, intron 3 of 7) 4690 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378 chr1 64797697 64797980 + 1.80287260729378 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -60088 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-27 chr2 60684461 60684968 + 1.80287260729378 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -11021 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-10 chr13 109818638 109818883 + 1.80287260729378 NA intron (NM_011056, intron 7 of 16) intron (NM_011056, intron 7 of 16) -85049 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-4 chr11 94968709 94969191 + 1.80287260729378 NA TTS (NM_018792) TTS (NM_018792) 1357 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-14 chr15 56695683 56695879 + 1.80287260729378 NA Intergenic Intergenic -1235 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-24 chr18 60724412 60724737 + 1.80287260729378 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 2992 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-42 chr7 109590783 109591261 + 1.80287260729378 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 25546 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-12 chr13 119708599 119708828 + 1.80287260729378 NA TTS (NM_145942) TTS (NM_145942) 18362 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378 chr1 40116361 40116587 + 1.80287260729378 NA intron (NM_010555, intron 5 of 8) intron (NM_010555, intron 5 of 8) 30381 NM_001360800 16178 Mm.1349 NM_010555 ENSMUSG00000026073 Il1r2 CD121b|Il1r-2 interleukin 1 receptor, type II protein-coding common_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-3 chr12 8876011 8876217 + 1.80287260729378 NA Intergenic Intergenic -45193 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-35 chr7 97581201 97581427 + 1.80287260729378 NA intron (NM_001081267, intron 1 of 15) intron (NM_001081267, intron 1 of 15) 1418 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-22 chr18 35854162 35854460 + 1.80287260729378 NA promoter-TSS (NM_001357459) promoter-TSS (NM_001357459) -376 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-9 chr13 45949212 45949651 + 1.80287260729378 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 15560 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-19 chr17 47295413 47295716 + 1.80287260729378 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 65334 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-26 chr19 45783863 45784119 + 1.80287260729378 NA promoter-TSS (NR_151594) promoter-TSS (NR_151594) -438 NM_023799 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 Hy5|Ncoat|OGA meningioma expressed antigen 5 (hyaluronidase) protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-38 chr5 109996543 109996882 + 1.80287260729378 NA intron (NM_145563, intron 1 of 3) intron (NM_145563, intron 1 of 3) 185 NM_145563 69504 Mm.441438 NM_145563 ENSMUSG00000066613 Zfp932 2310001H12Rik|Znf431 zinc finger protein 932 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-16 chr17 67141813 67142149 + 1.80287260729378 NA intron (NM_001357625, intron 2 of 32) intron (NM_001357625, intron 2 of 32) -115746 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-20 chr19 34570267 34570530 + 1.80287260729378 NA intron (NM_008332, intron 2 of 2) intron (NM_008332, intron 2 of 2) -13131 NM_010501 15959 Mm.426079 NM_010501 ENSMUSG00000074896 Ifit3 Ifi49|P49 interferon-induced protein with tetratricopeptide repeats 3 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-35 chr3 151442245 151442618 + 1.80287260729378 NA intron (NM_133222, intron 2 of 15) intron (NM_133222, intron 2 of 15) 4549 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak2_5_17_-1.84493939585057_3.24745530351703_1.80287260729378-16 chr6 114962006 114962295 + 1.80287260729378 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 7053 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-13 chr14 22886498 22886794 + 1.80287260729378 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 207925 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-25 chr3 145728649 145728909 + 1.80287260729378 NA Intergenic Intergenic -29913 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak1_19_5_1.46473444225052_3.31732972184642_1.80287260729378-29 chr5 134446049 134446458 + 1.80287260729378 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 10009 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak1_20_5_1.53462717487147_3.35227608815689_1.80287260729378-2 chr1 58718564 58718948 + 1.80287260729378 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) 5470 NM_001355056 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_15_30_-1.22415626616908_4.34211817730234_1.80107744087172 chr11 60913394 60913692 + 1.80107744087172 NA intron (NM_025294, intron 1 of 2) CpG 249 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding unique_peak2_15_30_-1.22415626616908_4.34211817730234_1.80107744087172-4 chr7 127041740 127042190 + 1.80107744087172 NA intron (NM_145588, intron 1 of 13) intron (NM_145588, intron 1 of 13) 455 NM_145588 110033 Mm.286488 NM_145588 ENSMUSG00000030677 Kif22 AU021460|C81217|Kid|Kif22a kinesin family member 22 protein-coding unique_peak2_15_30_-1.22415626616908_4.34211817730234_1.80107744087172-2 chr10 68282850 68283154 + 1.80107744087172 NA Intergenic Intergenic -4276 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_15_30_-1.22415626616908_4.34211817730234_1.80107744087172 chr10 19193291 19193963 + 1.80107744087172 NA intron (NR_038021, intron 3 of 3) MLT1L|LTR|ERVL-MaLR 26389 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_15_30_-1.22415626616908_4.34211817730234_1.80107744087172-3 chr17 78404630 78405185 + 1.80107744087172 NA intron (NM_001360407, intron 2 of 9) intron (NM_001360407, intron 2 of 9) 13245 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_15_30_-1.22415626616908_4.34211817730234_1.80107744087172 chr15 102243266 102243467 + 1.80107744087172 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 3134 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak2_15_30_-1.22415626616908_4.34211817730234_1.80107744087172-2 chr4 138464156 138464505 + 1.80107744087172 NA Intergenic Intergenic 9182 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-8 chr7 118447890 118448396 + 1.80107744087171 NA promoter-TSS (NM_001362179) promoter-TSS (NM_001362179) 79 NM_001362179 110058 Mm.156558 NM_138649 ENSMUSG00000058420 Syt17 Bk|sytXVII synaptotagmin XVII protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-3 chr14 20927262 20927734 + 1.80107744087171 NA Intergenic Intergenic -1900 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171 chr17 42912018 42912255 + 1.80107744087171 NA Intergenic Intergenic -35712 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-5 chr3 121672700 121673079 + 1.80107744087171 NA intron (NM_001033814, intron 2 of 5) intron (NM_001033814, intron 2 of 5) 2126 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171 chr1 105434751 105435014 + 1.80107744087171 NA Intergenic Intergenic -78172 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-4 chr8 11399914 11400141 + 1.80107744087171 NA intron (NM_009932, intron 6 of 47) intron (NM_009932, intron 6 of 47) -77902 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-2 chr2 76672691 76673314 + 1.80107744087171 NA promoter-TSS (NM_010222) promoter-TSS (NM_010222) 96 NM_001355079 14231 Mm.24720 NM_010222 ENSMUSG00000002732 Fkbp7 23kDa|FKBP-7|FKBP23 FK506 binding protein 7 protein-coding common_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-5 chr8 123691625 123692006 + 1.80107744087171 NA Intergenic Intergenic 37886 NM_133955 69581 Mm.168257 NM_133955 ENSMUSG00000039960 Rhou 2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K ras homolog family member U protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-7 chr5 102054454 102054930 + 1.80107744087171 NA intron (NM_172882, intron 1 of 66) intron (NM_172882, intron 1 of 66) 15229 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-6 chr4 57799233 57799569 + 1.80107744087171 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -45847 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-2 chr10 4432711 4433110 + 1.80107744087171 NA promoter-TSS (NM_025343) promoter-TSS (NM_025343) 305 NM_024261 73419 Mm.346733 NM_024261 ENSMUSG00000061759 Armt1 1700052N19Rik|AW320013|AW536799 acidic residue methyltransferase 1 protein-coding common_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-3 chr3 122342707 122343337 + 1.80107744087171 NA Intergenic Intergenic -49319 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-4 chr3 34220838 34221596 + 1.80107744087171 NA Intergenic Intergenic -139863 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak1_35_13_1.0843563266151_4.34953308536515_1.80107744087171-9 chrX 20869510 20870002 + 1.80107744087171 NA promoter-TSS (NM_011593) promoter-TSS (NM_011593) -410 NM_001044384 21857 Mm.8245 NM_011593 ENSMUSG00000001131 Timp1 Clgi|EPA|TIMP-1|TPA-S1|Timp tissue inhibitor of metalloproteinase 1 protein-coding unique_peak1_51_22_0.894921238824856_4.97102257546944_1.80105410004791-2 chr15 100614378 100615056 + 1.80105410004791 NA promoter-TSS (NM_011873) promoter-TSS (NM_011873) 393 NR_045701 78445 Mm.44383 NR_045701 ENSMUSG00000097093 C330013E15Rik - RIKEN cDNA C330013E15 gene ncRNA common_peak1_51_22_0.894921238824856_4.97102257546944_1.80105410004791-2 chr12 85279795 85280355 + 1.80105410004791 NA 5' UTR (NM_025421, exon 2 of 3) 5' UTR (NM_025421, exon 2 of 3) 360 NM_025421 66204 Mm.311985 NM_025421 ENSMUSG00000008822 Acyp1 1110039O14Rik|AI325944 acylphosphatase 1, erythrocyte (common) type protein-coding unique_peak1_51_22_0.894921238824856_4.97102257546944_1.80105410004791-3 chr3 108415297 108415955 + 1.80105410004791 NA promoter-TSS (NM_017392) promoter-TSS (NM_017392) -132 NM_001004177 53883 Mm.39728 NM_017392 ENSMUSG00000068740 Celsr2 Adgrc2|EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1 cadherin, EGF LAG seven-pass G-type receptor 2 protein-coding common_peak2_51_22_0.894921238824856_4.97102257546944_1.80105410004791 chr2 125782216 125782708 + 1.80105410004791 NA intron (NM_177608, intron 1 of 17) intron (NM_177608, intron 1 of 17) 408 NM_177608 70354 Mm.138091 NM_133725 ENSMUSG00000035093 Secisbp2l 3110001I20Rik|AI504340|C630011I23 SECIS binding protein 2-like protein-coding common_peak2_26_43_-0.979829788163895_4.96951672455535_1.80105410004791 chr1 183369016 183369538 + 1.80105410004791 NA intron (NM_177389, intron 1 of 26) CpG 288 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_51_22_0.894921238824856_4.97102257546944_1.80105410004791-3 chr8 123983092 123983536 + 1.80105410004791 NA promoter-TSS (NM_019552) promoter-TSS (NM_019552) -192 NM_019552 56199 Mm.274243 NM_019552 ENSMUSG00000031974 Abcb10 Abc-me|Abcb12 ATP-binding cassette, sub-family B (MDR/TAP), member 10 protein-coding unique_peak1_51_22_0.894921238824856_4.97102257546944_1.80105410004791 chr10 76873244 76874132 + 1.80105410004791 NA intron (NM_001347216, intron 2 of 15) intron (NM_001347216, intron 2 of 15) -50876 NR_152849 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding common_peak1_51_22_0.894921238824856_4.97102257546944_1.80105410004791 chr10 79097047 79097682 + 1.80105410004791 NA intron (NM_001004362, intron 1 of 5) intron (NM_001004362, intron 1 of 5) 236 NM_001359715 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak2_26_43_-0.979829788163895_4.96951672455535_1.80105410004791-2 chr4 80911821 80912664 + 1.80105410004791 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 1556 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding common_peak1_56_76_-0.7167874839223_5.90839279873375_1.7998230916066 chr13 98678954 98679532 + 1.7998230916066 NA Intergenic Intergenic 15588 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_92_47_0.666322641059081_5.9181238212507_1.7998230916066 chr2 156736217 156736868 + 1.7998230916066 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 15263 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak2_116_63_0.580154399336778_6.29007719966839_1.79914952665941 chr15 79062141 79062760 + 1.79914952665941 NA intron (NM_144849, intron 1 of 7) CpG 409 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding common_peak2_124_143_-0.495024220109369_6.92241289138763_1.79795914124821 chr11 116329768 116331786 + 1.79795914124821 NA TTS (NM_008240) TTS (NM_008240) 4577 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding unique_peak2_48_67_-0.754104697884284_5.7104104923082_1.79658675346641 chr1 132476804 132477640 + 1.79658675346641 NA promoter-TSS (NM_172517) promoter-TSS (NM_172517) -145 NM_001357486 213464 Mm.132868 NM_172517 ENSMUSG00000026439 Rbbp5 4933411J24Rik|C330016J05 retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit protein-coding common_peak1_81_40_0.713407562982354_5.71425578610926_1.79658675346641 chr3 14578688 14579529 + 1.79658675346641 NA intron (NM_007892, intron 1 of 7) CpG 437 NM_007892 13559 Mm.153415 NM_007892 ENSMUSG00000027552 E2f5 AU024671|E2F-5 E2F transcription factor 5 protein-coding common_peak2_48_67_-0.754104697884284_5.7104104923082_1.79658675346641 chr5 137115373 137116198 + 1.79658675346641 NA intron (NM_201373, intron 1 of 2) intron (NM_201373, intron 1 of 2) 422 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_264_164_0.384994780631436_7.55881960456153_1.79579773609102 chr3 95227677 95229787 + 1.79579773609102 NA promoter-TSS (NM_019914) promoter-TSS (NM_019914) -55 NM_019914 56772 Mm.331208 NM_019914 ENSMUSG00000053192 Mllt11 AI839562|Af1q|Zfp692 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 protein-coding common_peak2_71_91_-0.638905686957552_6.20410911257824_1.79487587501504 chr7 29179625 29180517 + 1.79487587501504 NA intron (NM_026545, intron 1 of 6) intron (NM_026545, intron 1 of 6) 602 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding common_peak1_71_91_-0.638905686957552_6.20410911257824_1.79487587501504 chr4 156196020 156197403 + 1.79487587501504 NA intron (NM_021604, intron 1 of 35) CpG 777 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_98_51_0.640406888910877_6.02064316259653_1.79459601430273 chr15 102103892 102104854 + 1.79459601430273 NA intron (NM_001355636, intron 1 of 28) intron (NM_001355636, intron 1 of 28) 1439 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_98_51_0.640406888910877_6.02064316259653_1.79459601430273-2 chr5 138263185 138264509 + 1.79459601430273 NA promoter-TSS (NR_045821) promoter-TSS (NR_045821) -198 NR_045821 69004 Mm.439868 NR_045821 ENSMUSG00000085227 6330418K02Rik - RIKEN cDNA 6330418K02 gene ncRNA common_peak2_104_55_0.617781693142411_6.11624576862881_1.79317922900698 chr2 156736099 156736947 + 1.79317922900698 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 15244 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak1_104_55_0.617781693142411_6.11624576862881_1.79317922900698 chr6 146501179 146502208 + 1.79317922900698 NA intron (NM_019923, intron 1 of 56) CpG 530 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_66_86_-0.66139047820834_6.11224825674456_1.79317922900698 chr4 82166568 82167304 + 1.79317922900698 NA Intergenic Intergenic -101046 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA common_peak2_407_267_0.303412330386402_8.21779535565097_1.79123210175955 chr11 96252883 96256118 + 1.79123210175955 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) 2840 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA common_peak2_93_113_-0.566283690435931_6.54974816894678_1.79119494269044-2 chr9 58488210 58489024 + 1.79119494269044 NA promoter-TSS (NM_176921) promoter-TSS (NM_176921) 14 NM_176921 319477 Mm.153674 NM_176921 ENSMUSG00000066607 6030419C18Rik - RIKEN cDNA 6030419C18 gene protein-coding common_peak2_93_113_-0.566283690435931_6.54974816894678_1.79119494269044 chr1 58423186 58424014 + 1.79119494269044 NA intron (NM_001042634, intron 1 of 12) CpG 488 NR_027854 12747 Mm.1761 NM_009905 ENSMUSG00000026034 Clk1 STY CDC-like kinase 1 protein-coding common_peak2_99_119_-0.551646713029455_6.63106723909379_1.78847588378189 chr11 86683124 86684417 + 1.78847588378189 NA promoter-TSS (NM_175004) promoter-TSS (NM_175004) -213 NM_175004 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding common_peak2_152_87_0.50501546358082_6.71193935042771_1.7881131633596 chr11 17159351 17160755 + 1.7881131633596 NA intron (NM_024459, intron 1 of 5) intron (NM_024459, intron 1 of 5) 755 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak1_152_87_0.50501546358082_6.71193935042771_1.7881131633596 chr7 99268419 99269937 + 1.7881131633596 NA exon (NM_001043355, exon 1 of 3) exon (NM_001043355, exon 1 of 3) 832 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-39 chr7 126428918 126429171 + 1.78669045979184 NA 5' UTR (NM_030566, exon 1 of 13) 5' UTR (NM_030566, exon 1 of 13) 277 NM_030566 70314 Mm.35467 NM_030566 ENSMUSG00000030727 Rabep2 2610011A08Rik|AI462746|Fra rabaptin, RAB GTPase binding effector protein 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-52 chr6 35423107 35423321 + 1.78669045979184 NA Intergenic Intergenic 92368 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-62 chr7 139297668 139297921 + 1.78669045979184 NA Intergenic Intergenic 49312 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-20 chr2 24478504 24478715 + 1.78669045979184 NA Intergenic Intergenic -3010 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-43 chr8 61639109 61639370 + 1.78669045979184 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -48070 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-10 chr13 42579399 42579626 + 1.78669045979184 NA Intergenic Intergenic -101287 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-23 chr14 122057031 122057421 + 1.78669045979184 NA Intergenic Intergenic 22552 NM_001037744 223262 Mm.297637 NM_001037744 ENSMUSG00000071229 Timm8a2 - translocase of inner mitochondrial membrane 8A2 protein-coding common_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184 chrX 164419921 164420141 + 1.78669045979184 NA intron (NR_152315, intron 1 of 5) intron (NR_152315, intron 1 of 5) 251 NM_011081 18700 Mm.3781 NM_011081 ENSMUSG00000031381 Piga AI194334|Pig-a phosphatidylinositol glycan anchor biosynthesis, class A protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-33 chr2 115781592 115781835 + 1.78669045979184 NA Intergenic Intergenic 142988 NR_035476 100316703 NR_035476 ENSMUSG00000088606 Mir1951 mir-1951|mmu-mir-1951 microRNA 1951 ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-71 chr9 65575648 65575984 + 1.78669045979184 NA intron (NM_153119, intron 1 of 5) intron (NM_153119, intron 1 of 5) 4271 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-55 chr6 97827051 97827304 + 1.78669045979184 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) 20119 NM_001113198 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-19 chr13 80936669 80936915 + 1.78669045979184 NA Intergenic Intergenic -3611 NR_103550 71416 Mm.415500 NR_103550 5430425K12Rik - RIKEN cDNA 5430425K12 gene ncRNA unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-27 chr3 97762381 97762705 + 1.78669045979184 NA intron (NM_001039376, intron 8 of 46) ID4_|SINE|ID 5471 NM_178080 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-26 chr17 45866468 45866826 + 1.78669045979184 NA Intergenic Intergenic 14805 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-22 chr2 103761399 103761650 + 1.78669045979184 NA promoter-TSS (NM_153126) promoter-TSS (NM_153126) -254 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-13 chr17 36959344 36959577 + 1.78669045979184 NA promoter-TSS (NM_001355422) promoter-TSS (NM_001355422) 868 NM_029602 76416 Mm.26684 NM_029602 ENSMUSG00000036214 Znrd1as 1700022C21Rik|AI746295|Znrd1-as zinc ribbon domain containing 1, antisense protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-16 chr12 26341179 26341374 + 1.78669045979184 NA intron (NM_080563, intron 2 of 8) intron (NM_080563, intron 2 of 8) -5434 NR_130981 75243 Mm.444753 NR_130981 ENSMUSG00000114048 4930549C15Rik - RIKEN cDNA 4930549C15 gene ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-24 chr16 13159221 13159463 + 1.78669045979184 NA Intergenic Intergenic 49606 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-31 chr4 152264206 152264415 + 1.78669045979184 NA intron (NM_133348, intron 8 of 8) intron (NM_133348, intron 8 of 8) -10052 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-2 chr1 58678096 58678323 + 1.78669045979184 NA intron (NM_001347056, intron 5 of 13) intron (NM_001347056, intron 5 of 13) 14236 NM_001347056 108812 Mm.442063 NM_175370 ENSMUSG00000047528 Als2cr12 4933405P16Rik|4933425F06Rik amyotrophic lateral sclerosis 2 chromosome region 12 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-15 chr18 35895367 35895594 + 1.78669045979184 NA Intergenic B1F1|SINE|Alu 40793 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-49 chr5 115538067 115538345 + 1.78669045979184 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -21261 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-61 chr7 132658139 132658555 + 1.78669045979184 NA intron (NM_029609, intron 6 of 6) intron (NM_029609, intron 6 of 6) 47704 NM_029609 76429 Mm.276721 NM_029609 ENSMUSG00000030946 Lhpp 2310007H09Rik phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-36 chr2 151971112 151971299 + 1.78669045979184 NA intron (NM_146127, intron 1 of 1) MIRc|SINE|MIR 2189 NM_001289151 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-42 chr3 89196313 89196525 + 1.78669045979184 NA Intergenic Intergenic -6506 NM_001077411 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-63 chr8 10589871 10590084 + 1.78669045979184 NA intron (NM_001319151, intron 32 of 34) intron (NM_001319151, intron 32 of 34) 292477 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-30 chr19 55430869 55431125 + 1.78669045979184 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 114940 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-32 chr5 38555656 38555937 + 1.78669045979184 NA intron (NM_011715, intron 2 of 14) MIRc|SINE|MIR 5799 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-46 chr4 47153483 47153727 + 1.78669045979184 NA Intergenic Intergenic -54407 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-46 chrX 7258328 7258675 + 1.78669045979184 NA intron (NM_001243762, intron 2 of 13) intron (NM_001243762, intron 2 of 13) -10004 NR_030242 751544 NR_030242 ENSMUSG00000070139 Mir532 Mirn532|mir-532|mmu-mir-532 microRNA 532 ncRNA common_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-2 chr8 25077045 25077238 + 1.78669045979184 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 24670 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-12 chr16 24418133 24418370 + 1.78669045979184 NA intron (NM_178665, intron 1 of 12) L3|LINE|CR1 -24596 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-7 chr11 72080578 72080859 + 1.78669045979184 NA intron (NM_001081641, intron 3 of 18) intron (NM_001081641, intron 3 of 18) 38216 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-21 chr14 32003229 32003498 + 1.78669045979184 NA Intergenic Intergenic -25740 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-14 chr17 84366665 84366905 + 1.78669045979184 NA intron (NM_183021, intron 26 of 37) intron (NM_183021, intron 26 of 37) 99423 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-5 chr1 134106287 134106509 + 1.78669045979184 NA Intergenic Intergenic -4844 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-25 chr3 37732879 37733237 + 1.78669045979184 NA Intergenic Intergenic -8698 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-17 chr12 77225121 77225497 + 1.78669045979184 NA Intergenic Intergenic -12795 NM_001252614 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-29 chr18 67937462 67937748 + 1.78669045979184 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 4432 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-66 chr8 117279789 117279998 + 1.78669045979184 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 22874 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-57 chr7 4100167 4100396 + 1.78669045979184 NA intron (NR_033568, intron 5 of 8) B3|SINE|B2 -19249 NM_001109765 57776 Mm.29729 NM_021324 ENSMUSG00000030428 Ttyh1 4930459B04Rik|6330408P11Rik|TTY1|mTTY1|tty tweety family member 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-8 chr12 40109634 40109870 + 1.78669045979184 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 24476 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-31 chr2 31451019 31451211 + 1.78669045979184 NA Intergenic Intergenic -19155 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-20 chr14 8126038 8126288 + 1.78669045979184 NA intron (NM_001360314, intron 3 of 19) intron (NM_001360314, intron 3 of 19) 27952 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-45 chr3 151567782 151568047 + 1.78669045979184 NA Intergenic Intergenic 130032 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-40 chr7 137001027 137001250 + 1.78669045979184 NA intron (NM_008598, intron 2 of 4) intron (NM_008598, intron 2 of 4) 106527 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-22 chr14 118667373 118667634 + 1.78669045979184 NA intron (NM_001033336, intron 3 of 30) intron (NM_001033336, intron 3 of 30) 9428 NM_001163675 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-17 chr18 75503788 75504075 + 1.78669045979184 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -10714 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-4 chr1 132379540 132379870 + 1.78669045979184 NA intron (NM_178874, intron 2 of 4) intron (NM_178874, intron 2 of 4) 10613 NM_001311107 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-44 chr8 113957796 113958064 + 1.78669045979184 NA Intergenic Intergenic -109091 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-68 chr8 124257284 124257559 + 1.78669045979184 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 26027 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-47 chr4 109421083 109421295 + 1.78669045979184 NA intron (NM_001145948, intron 2 of 17) intron (NM_001145948, intron 2 of 17) 5542 NM_001145948 230603 Mm.33091 NM_153392 ENSMUSG00000028555 Ttc39a 4922503N01Rik tetratricopeptide repeat domain 39A protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-6 chr10 127380433 127380661 + 1.78669045979184 NA promoter-TSS (NM_001359244) promoter-TSS (NM_001359244) -121 NM_001359244 71750 Mm.29342 NM_027900 ENSMUSG00000025404 R3hdm2 1300003K24Rik|AU041262|mKIAA1002 R3H domain containing 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-64 chr8 24429921 24430185 + 1.78669045979184 NA Intergenic Intergenic 8893 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-33 chr5 113589853 113590075 + 1.78669045979184 NA TTS (NM_177292) TTS (NM_177292) 39544 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184 chr4 135309472 135309684 + 1.78669045979184 NA Intergenic Intergenic -36818 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184 chr1 154148250 154148599 + 1.78669045979184 NA Intergenic Intergenic -52763 NM_001204908 100503355 Mm.484410 NM_001204908 ENSMUSG00000066797 Zfp648 Gm10178|Gm203 zinc finger protein 648 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-53 chr6 37398751 37398940 + 1.78669045979184 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 43303 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-13 chr11 54907732 54908062 + 1.78669045979184 NA intron (NM_001329860, intron 3 of 5) intron (NM_001329860, intron 3 of 5) 5043 NM_008161 14778 Mm.200916 NM_008161 ENSMUSG00000018339 Gpx3 AA960521|EGPx|GPx|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-34 chr2 127143066 127143278 + 1.78669045979184 NA promoter-TSS (NM_001163528) promoter-TSS (NM_001163528) 285 NM_001163527 73338 Mm.57559 NM_001163527 ENSMUSG00000074825 Itpripl1 1700041B20Rik inositol 1,4,5-triphosphate receptor interacting protein-like 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-44 chr3 132950540 132950824 + 1.78669045979184 NA promoter-TSS (NM_001287103) promoter-TSS (NM_001287103) -391 NM_033525 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-28 chr3 101516007 101516222 + 1.78669045979184 NA Intergenic Intergenic 88593 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-39 chr2 172257581 172257838 + 1.78669045979184 NA Intergenic Intergenic 9217 NM_008561 17201 Mm.57183 NM_008561 ENSMUSG00000038537 Mc3r MC3-R melanocortin 3 receptor protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-65 chr8 91998158 91998411 + 1.78669045979184 NA Intergenic Intergenic -196630 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-3 chr10 89775707 89776005 + 1.78669045979184 NA intron (NM_029166, intron 3 of 20) intron (NM_029166, intron 3 of 20) 30865 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-25 chr16 23135761 23136122 + 1.78669045979184 NA Intergenic Intergenic -8211 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-34 chr6 6114729 6115000 + 1.78669045979184 NA intron (NM_001177572, intron 7 of 17) intron (NM_001177572, intron 7 of 17) 102309 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-30 chr4 94095353 94095651 + 1.78669045979184 NA Intergenic Intergenic 461294 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-7 chr10 24491669 24491952 + 1.78669045979184 NA Intergenic Intergenic -103632 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-16 chr18 38800175 38800424 + 1.78669045979184 NA Intergenic Intergenic -92157 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-67 chr8 119807740 119807960 + 1.78669045979184 NA Intergenic Intergenic -29434 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-37 chr2 157452915 157453268 + 1.78669045979184 NA intron (NM_001025395, intron 2 of 13) intron (NM_001025395, intron 2 of 13) 28798 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-23 chr2 157553383 157553617 + 1.78669045979184 NA Intergenic Intergenic -6578 NM_001291129 18111 Mm.34330 NM_010923 ENSMUSG00000067786 Nnat 5730414I02Rik|AW107673|Peg5 neuronatin protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-15 chr11 87579792 87580007 + 1.78669045979184 NA intron (NM_001284398, intron 1 of 10) intron (NM_001284398, intron 1 of 10) -1162 NM_001284394 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|Pnutl2 septin 4 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-9 chr13 32268236 32268521 + 1.78669045979184 NA intron (NM_146041, intron 1 of 10) intron (NM_146041, intron 1 of 10) 70166 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-14 chr11 55412388 55412677 + 1.78669045979184 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 7548 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-3 chr1 73948529 73948823 + 1.78669045979184 NA intron (NM_001289895, intron 19 of 32) intron (NM_001289895, intron 19 of 32) -84210 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-8 chr10 96237052 96237473 + 1.78669045979184 NA intron (NR_110448, intron 1 of 2) intron (NR_110448, intron 1 of 2) 11055 NR_110448 74881 Mm.410819 NR_110448 ENSMUSG00000112762 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-35 chr6 112544779 112545002 + 1.78669045979184 NA Intergenic Intergenic -55065 NM_001081147 18430 Mm.333310 NM_001081147 ENSMUSG00000049112 Oxtr OTR oxytocin receptor protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-24 chr3 36465471 36465673 + 1.78669045979184 NA intron (NM_009673, intron 2 of 12) intron (NM_009673, intron 2 of 12) 9952 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-2 chr10 24554771 24555063 + 1.78669045979184 NA Intergenic B3|SINE|B2 -40525 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-47 chrX 75873850 75874140 + 1.78669045979184 NA intron (NM_001346519, intron 1 of 16) intron (NM_001346519, intron 1 of 16) 579 NM_145629 102866 Mm.28777 NM_145629 ENSMUSG00000016382 Pls3 AI115446|AL024105 plastin 3 (T-isoform) protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-43 chr3 132118522 132118817 + 1.78669045979184 NA intron (NM_020265, intron 1 of 3) intron (NM_020265, intron 1 of 3) 33377 NM_020265 56811 Mm.103593 NM_020265 ENSMUSG00000028031 Dkk2 - dickkopf WNT signaling pathway inhibitor 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-27 chr18 38095195 38095497 + 1.78669045979184 NA Intergenic PB1D10|SINE|Alu -96377 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-59 chr7 79271205 79271563 + 1.78669045979184 NA Intergenic Intergenic -1882 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-11 chr11 19829674 19829985 + 1.78669045979184 NA Intergenic Intergenic -94613 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-51 chr5 145223558 145223868 + 1.78669045979184 NA Intergenic Intergenic -8002 NM_001083958 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-5 chr10 111519735 111519984 + 1.78669045979184 NA Intergenic Intergenic 13573 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-36 chr6 128031045 128031296 + 1.78669045979184 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 112408 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-42 chr8 36586235 36586485 + 1.78669045979184 NA intron (NM_001194940, intron 8 of 17) intron (NM_001194940, intron 8 of 17) 27583 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-58 chr7 24449614 24450128 + 1.78669045979184 NA Intergenic PB1|SINE|Alu -4189 NM_199013 210145 Mm.33811 NM_199013 ENSMUSG00000062028 Irgc1 F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc immunity-related GTPase family, cinema 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-26 chr3 37925146 37925408 + 1.78669045979184 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 26464 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-72 chr9 113706275 113706601 + 1.78669045979184 NA intron (NM_001164678, intron 1 of 17) intron (NM_001164678, intron 1 of 17) 1821 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-28 chr18 57440703 57440953 + 1.78669045979184 NA Intergenic Intergenic -27658 NM_001134697 629147 Mm.57415 NM_001134697 ENSMUSG00000069372 Ctxn3 - cortexin 3 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-6 chr1 193519130 193519467 + 1.78669045979184 NA Intergenic Intergenic -11768 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-32 chr2 36216181 36216473 + 1.78669045979184 NA Intergenic Intergenic -14099 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-19 chr2 13455257 13455529 + 1.78669045979184 NA exon (NM_001081084, exon 17 of 67) exon (NM_001081084, exon 17 of 67) 36483 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-41 chr8 8622450 8622728 + 1.78669045979184 NA intron (NM_010111, intron 3 of 4) intron (NM_010111, intron 3 of 4) 38184 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-45 chr9 103054942 103055292 + 1.78669045979184 NA intron (NM_033314, intron 3 of 13) intron (NM_033314, intron 3 of 13) 46628 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-4 chr10 93271188 93271468 + 1.78669045979184 NA intron (NM_001322265, intron 2 of 4) intron (NM_001322265, intron 2 of 4) 39831 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-48 chr4 140657849 140658098 + 1.78669045979184 NA intron (NM_001290803, intron 1 of 28) intron (NM_001290803, intron 1 of 28) 7914 NM_001290803 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-12 chr11 35917374 35917811 + 1.78669045979184 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 62497 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-70 chr9 57990251 57990460 + 1.78669045979184 NA Intergenic Intergenic -7669 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-54 chr6 51544095 51544367 + 1.78669045979184 NA promoter-TSS (NM_001127348) promoter-TSS (NM_001127348) -292 NM_028035 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-35 chr2 130837764 130838015 + 1.78669045979184 NA intron (NM_029432, intron 1 of 36) intron (NM_029432, intron 1 of 36) 1798 NM_001311147 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-69 chr8 128457792 128458049 + 1.78669045979184 NA exon (NM_008737, exon 7 of 17) exon (NM_008737, exon 7 of 17) 98679 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-56 chr6 128091210 128091429 + 1.78669045979184 NA intron (NM_175414, intron 1 of 8) intron (NM_175414, intron 1 of 8) 52259 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-9 chr11 8487139 8487407 + 1.78669045979184 NA intron (NM_001083587, intron 17 of 30) intron (NM_001083587, intron 17 of 30) 177262 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-50 chr5 140607598 140607801 + 1.78669045979184 NA exon (NM_008494, exon 1 of 8) exon (NM_008494, exon 1 of 8) 358 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-41 chr3 84108931 84109121 + 1.78669045979184 NA intron (NM_029797, intron 5 of 7) intron (NM_029797, intron 5 of 7) 46760 NM_029797 76915 Mm.274829 NM_029797 ENSMUSG00000033752 Mnd1 2610034E18Rik|AI591601|Gaj meiotic nuclear divisions 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-37 chr7 63912214 63912507 + 1.78669045979184 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) -4497 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-18 chr19 28758895 28759121 + 1.78669045979184 NA Intergenic Intergenic -76158 NM_009199 20510 Mm.246670 NM_009199 ENSMUSG00000024935 Slc1a1 D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-60 chr7 126272922 126273169 + 1.78669045979184 NA 5' UTR (NM_145587, exon 1 of 4) 5' UTR (NM_145587, exon 1 of 4) 549 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-29 chr4 89383808 89384139 + 1.78669045979184 NA intron (NR_132431, intron 3 of 9) intron (NR_132431, intron 3 of 9) -72941 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-40 chr2 181694118 181694353 + 1.78669045979184 NA promoter-TSS (NM_001291210) promoter-TSS (NM_001291210) -258 NM_001291209 56470 Mm.274366 NM_026446 ENSMUSG00000002458 Rgs19 2610042F04Rik|AI324841|AW547781|GAIP regulator of G-protein signaling 19 protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-38 chr2 165493535 165493846 + 1.78669045979184 NA promoter-TSS (NM_001007581) promoter-TSS (NM_001007581) -376 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-18 chr12 82197074 82197343 + 1.78669045979184 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 27192 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-11 chr16 11251897 11252160 + 1.78669045979184 NA intron (NM_146066, intron 1 of 14) intron (NM_146066, intron 1 of 14) 2297 NM_001130008 14852 Mm.325827 NM_146066 ENSMUSG00000062203 Gspt1 AI314175|AI326449|AV307676|C79774|G1st|Gst-1 G1 to S phase transition 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-38 chr7 90444467 90444677 + 1.78669045979184 NA 3' UTR (NM_145151, exon 1 of 1) 3' UTR (NM_145151, exon 1 of 1) 1791 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184 chr1 12230957 12231218 + 1.78669045979184 NA Intergenic Intergenic -194899 NR_105759 102465961 NR_105759 ENSMUSG00000098555 Mir6341 Gm27262|mmu-mir-6341 microRNA 6341 ncRNA unique_peak1_15_5_1.14507754349664_3.15750127246948_1.78669045979184-10 chr11 18816165 18816418 + 1.78669045979184 NA Intergenic Intergenic 202678 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak2_5_13_-1.48236931646587_3.06617026382467_1.78669045979184-21 chr2 30695169 30695433 + 1.78669045979184 NA Intergenic Intergenic -17290 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak1_76_37_0.732906938727604_5.61438098280739_1.78594796811656-2 chr1 195131003 195131559 + 1.78594796811656 NA exon (NM_001355060, exon 1 of 10) exon (NM_001355060, exon 1 of 10) 289 NM_001355060 12946 Mm.301652 NM_013499 ENSMUSG00000016481 Cr1l Crry|Mcp|mCRY complement component (3b/4b) receptor 1-like protein-coding common_peak1_76_37_0.732906938727604_5.61438098280739_1.78594796811656-3 chr17 5439663 5440503 + 1.78594796811656 NA intron (NM_027457, intron 1 of 3) intron (NM_027457, intron 1 of 3) 177 NM_027457 70544 Mm.46654 NM_027457 ENSMUSG00000004945 Tmem242 1110008A10Rik|2310046K16Rik|5730437N04Rik transmembrane protein 242 protein-coding common_peak1_76_37_0.732906938727604_5.61438098280739_1.78594796811656 chr1 7089044 7090382 + 1.78594796811656 NA intron (NM_183028, intron 1 of 5) intron (NM_183028, intron 1 of 5) 793 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_76_37_0.732906938727604_5.61438098280739_1.78594796811656-4 chr2 38546638 38547451 + 1.78594796811656 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 35168 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896-2 chr19 4794240 4794993 + 1.78434948019896 NA promoter-TSS (NM_001290122) promoter-TSS (NM_001290122) -607 NM_001290123 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding unique_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896 chr1 55237311 55238055 + 1.78434948019896 NA exon (NM_175439, exon 1 of 1) exon (NM_175439, exon 1 of 1) 506 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896 chr11 96992142 96992931 + 1.78434948019896 NA Intergenic Intergenic -14848 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_29_47_-0.954429955522027_5.10774752296014_1.78434948019896 chr18 39378798 39379553 + 1.78434948019896 NA Intergenic Intergenic 108070 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896-6 chr3 101923978 101924724 + 1.78434948019896 NA 5' UTR (NM_001039371, exon 1 of 12) 5' UTR (NM_001039371, exon 1 of 12) 102 NM_001039371 242126 Mm.90204 NM_001039371 ENSMUSG00000033147 Slc22a15 2610034P21Rik|4930477M19|A530052I06Rik|BB219042 solute carrier family 22 (organic anion/cation transporter), member 15 protein-coding common_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896-2 chr11 101119238 101119805 + 1.78434948019896 NA promoter-TSS (NM_134024) promoter-TSS (NM_134024) 320 NM_026501 67998 Mm.33881 NM_026501 ENSMUSG00000017802 Retreg3 1300010M03Rik|4933404C01Rik|AI551748|Fam134c reticulophagy regulator family member 3 protein-coding common_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896-4 chr15 31236118 31236665 + 1.78434948019896 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 12006 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896-5 chr19 24698346 24698984 + 1.78434948019896 NA intron (NM_175013, intron 10 of 10) intron (NM_175013, intron 10 of 10) 24657 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak1_56_25_0.84955933863151_5.12521938745685_1.78434948019896-3 chr14 122105301 122105956 + 1.78434948019896 NA intron (NR_015586, intron 1 of 3) intron (NR_015586, intron 1 of 3) 1346 NR_015586 319727 Mm.215552 NR_015586 A330035P11Rik - RIKEN cDNA A330035P11 gene ncRNA common_peak2_52_72_-0.744054503610157_5.81779730707494_1.78324025080683-2 chr7 80839987 80840923 + 1.78324025080683 NA Intergenic Intergenic -21653 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_52_72_-0.744054503610157_5.81779730707494_1.78324025080683 chr2 153632163 153632773 + 1.78324025080683 NA intron (NM_001195390, intron 1 of 9) intron (NM_001195390, intron 1 of 9) 313 NM_001195390 99311 Mm.294478 NM_133850 ENSMUSG00000056941 Commd7 2310010I22Rik|AW060956|mU3 COMM domain containing 7 protein-coding common_peak2_53_72_-0.717277707979858_5.83118570489009_1.78324025080683 chr11 70763866 70764857 + 1.78324025080683 NA promoter-TSS (NM_177565) promoter-TSS (NM_177565) -86 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak2_53_72_-0.717277707979858_5.83118570489009_1.78324025080683-2 chr7 127195373 127195993 + 1.78324025080683 NA intron (NM_001285905, intron 1 of 6) CpG 394 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak2_77_97_-0.615391047005884_6.30701432061227_1.78026981523161 chr9 119983150 119984248 + 1.78026981523161 NA promoter-TSS (NM_001357560) promoter-TSS (NM_001357560) 80 NM_001357562 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak1_266_166_0.378383556580088_7.5728960707641_1.78009276476634 chr11 83852394 83855099 + 1.78009276476634 NA intron (NM_001291269, intron 1 of 8) intron (NM_001291269, intron 1 of 8) 786 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_88_108_-0.579877098376999_6.47824577558843_1.779971540906 chr1 75505141 75506692 + 1.779971540906 NA exon (NM_178884, exon 1 of 20) exon (NM_178884, exon 1 of 20) 536 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding common_peak1_88_108_-0.579877098376999_6.47824577558843_1.779971540906 chr2 90485675 90486963 + 1.779971540906 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -7145 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_131_73_0.54350265962232_6.48120469544011_1.779971540906 chr19 21778360 21779345 + 1.779971540906 NA intron (NM_001033759, intron 1 of 23) CpG 512 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_71_34_0.755373252154494_5.50696964302221_1.77845724322144-2 chr8 77494621 77495641 + 1.77845724322144 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -21925 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_71_34_0.755373252154494_5.50696964302221_1.77845724322144 chr4 59336847 59337617 + 1.77845724322144 NA intron (NM_001163288, intron 12 of 16) intron (NM_001163288, intron 12 of 16) 77181 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_40_59_-0.828876048434837_5.4924525713911_1.77845724322143 chr10 24573478 24574351 + 1.77845724322143 NA Intergenic Intergenic -21528 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_40_59_-0.828876048434837_5.4924525713911_1.77845724322143-2 chr8 47932665 47933154 + 1.77845724322143 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 57642 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235-2 chr1 180312261 180312799 + 1.77675427888235 NA Intergenic Intergenic -17946 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding unique_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235 chr11 85235230 85235864 + 1.77675427888235 NA promoter-TSS (NM_025825) promoter-TSS (NM_025825) 381 NR_028329 654810 Mm.209580 NR_028329 ENSMUSG00000085628 Appbp2os D630032N06Rik amyloid beta precursor protein (cytoplasmic tail) binding protein 2, opposite strand ncRNA common_peak2_47_20_0.911503244093245_4.84806904482538_1.77675427888235-2 chr1 182503987 182504340 + 1.77675427888235 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 13447 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_48_20_0.941040720587294_4.86283778307241_1.77675427888235 chr3 108911945 108912146 + 1.77675427888235 NA promoter-TSS (NM_001356292) promoter-TSS (NM_001356292) -316 NM_001356292 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding unique_peak1_48_20_0.941040720587294_4.86283778307241_1.77675427888235 chr1 170478505 170479168 + 1.77675427888235 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 78274 NM_027528 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak2_23_40_-1.04667635817283_4.83421382553167_1.77675427888235 chr8 41125816 41126306 + 1.77675427888235 NA intron (NM_001005863, intron 1 of 13) intron (NM_001005863, intron 1 of 13) 7665 NM_001005863 102103 Mm.149438 NM_001005863 ENSMUSG00000045636 Mtus1 AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288 mitochondrial tumor suppressor 1 protein-coding common_peak2_47_20_0.911503244093245_4.84806904482538_1.77675427888235-3 chr10 80987794 80988107 + 1.77675427888235 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 13415 NM_001038655 14708 Mm.222496 NM_010319 ENSMUSG00000048240 Gng7 AI840417 guanine nucleotide binding protein (G protein), gamma 7 protein-coding common_peak2_47_20_0.911503244093245_4.84806904482538_1.77675427888235 chr1 171287644 171287982 + 1.77675427888235 NA TTS (NM_001360931) TTS (NM_001360931) 148 NM_013919 30941 Mm.27510 NM_013919 ENSMUSG00000053483 Usp21 ESTM28|Usp16|Usp23|W53272 ubiquitin specific peptidase 21 protein-coding common_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235-3 chr18 12941238 12941810 + 1.77675427888235 NA intron (NM_207530, intron 1 of 27) CpG 317 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_23_40_-1.04667635817283_4.83421382553167_1.77675427888235 chr13 77134803 77135371 + 1.77675427888235 NA promoter-TSS (NM_001145676) promoter-TSS (NM_001145676) 381 NM_134071 105377 Mm.209730 NM_134071 ENSMUSG00000021597 Slf1 2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik SMC5-SMC6 complex localization factor 1 protein-coding unique_peak2_23_40_-1.04667635817283_4.83421382553167_1.77675427888235-3 chr9 103031801 103032202 + 1.77675427888235 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 23512 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_47_20_0.911503244093245_4.84806904482538_1.77675427888235-4 chr2 27885924 27886259 + 1.77675427888235 NA promoter-TSS (NM_015734) promoter-TSS (NM_015734) -334 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak2_23_40_-1.04667635817283_4.83421382553167_1.77675427888235-2 chr8 103347876 103348545 + 1.77675427888235 NA promoter-TSS (NR_036588) promoter-TSS (NR_036588) -676 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA unique_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235-2 chr5 146270779 146271474 + 1.77675427888235 NA intron (NM_153599, intron 3 of 12) intron (NM_153599, intron 3 of 12) 39876 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding common_peak2_23_40_-1.04667635817283_4.83421382553167_1.77675427888235-2 chr9 21333351 21333698 + 1.77675427888235 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) -4304 NM_152808 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding unique_peak1_48_20_0.941040720587294_4.86283778307241_1.77675427888235-2 chr3 27473675 27474240 + 1.77675427888235 NA intron (NM_001356953, intron 12 of 26) intron (NM_001356953, intron 12 of 26) 102606 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|GHRP|GHS-R|Ghsr1a growth hormone secretagogue receptor protein-coding unique_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235-3 chr5 151110591 151111213 + 1.77675427888235 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 79291 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235 chr1 158606832 158607456 + 1.77675427888235 NA intron (NM_007495, intron 14 of 22) intron (NM_007495, intron 14 of 22) 101519 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA unique_peak1_47_20_0.911503244093245_4.84806904482538_1.77675427888235-4 chr8 31828582 31829025 + 1.77675427888235 NA intron (NM_178591, intron 4 of 8) intron (NM_178591, intron 4 of 8) 89400 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_113_132_-0.512338358301833_6.79911325635027_1.77638557969138 chr12 105784697 105786441 + 1.77638557969138 NA intron (NM_011112, intron 1 of 21) intron (NM_011112, intron 1 of 21) 872 NM_001347440 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding common_peak2_33_51_-0.89060886080464_5.25513528773877_1.77636329975052 chr19 40478518 40479054 + 1.77636329975052 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -27388 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_61_28_0.81246854442521_5.26421526734018_1.77636329975051 chr13 60602034 60602661 + 1.77636329975051 NA intron (NM_134062, intron 1 of 26) CpG 136 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding common_peak2_61_28_0.81246854442521_5.26421526734018_1.77636329975051-3 chr8 126842520 126843122 + 1.77636329975051 NA Intergenic Intergenic -6199 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_61_28_0.81246854442521_5.26421526734018_1.77636329975051 chr11 103688644 103689148 + 1.77636329975051 NA intron (NM_019650, intron 2 of 5) intron (NM_019650, intron 2 of 5) 8814 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak2_61_28_0.81246854442521_5.26421526734018_1.77636329975051-2 chr14 76721723 76722384 + 1.77636329975051 NA Intergenic MER45A|DNA|hAT-Tip100 -38078 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_61_28_0.81246854442521_5.26421526734018_1.77636329975051-2 chr13 73683579 73684311 + 1.77636329975051 NA exon (NM_028878, exon 10 of 12) exon (NM_028878, exon 10 of 12) -5922 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-31 chr8 41416211 41416466 + 1.77631109801764 NA intron (NM_013522, intron 1 of 8) intron (NM_013522, intron 1 of 8) 780 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-4 chr11 3418365 3418822 + 1.77631109801764 NA intron (NM_001290473, intron 5 of 5) intron (NM_001290473, intron 5 of 5) -9355 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-16 chr18 11348771 11349179 + 1.77631109801764 NA Intergenic Intergenic -284301 NM_001252495 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding common_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764 chr12 111536529 111536922 + 1.77631109801764 NA Intergenic Intergenic -1376 NM_178041 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-20 chr2 117742580 117742839 + 1.77631109801764 NA Intergenic Intergenic 70093 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764 chr1 156065419 156065882 + 1.77631109801764 NA 3' UTR (NM_001358627, exon 6 of 6) 3' UTR (NM_001358627, exon 6 of 6) 24789 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-32 chr9 120830962 120831295 + 1.77631109801764 NA Intergenic Intergenic 84122 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-27 chr6 88446070 88446391 + 1.77631109801764 NA exon (NM_023060, exon 1 of 7) exon (NM_023060, exon 1 of 7) 309 NM_023060 65967 Mm.333237 NM_023060 ENSMUSG00000033216 Eefsec Selb|mSelB|sec eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding common_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-2 chr18 38338602 38338840 + 1.77631109801764 NA intron (NM_011937, intron 1 of 6) intron (NM_011937, intron 1 of 6) 272 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-8 chr12 73779745 73779971 + 1.77631109801764 NA Intergenic Intergenic -121466 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_26_8_1.30967682903109_3.82476341595786_1.77631109801764-2 chr9 35360607 35360904 + 1.77631109801764 NA Intergenic Intergenic 79650 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA common_peak2_26_8_1.30967682903109_3.82476341595786_1.77631109801764 chr19 43663178 43663395 + 1.77631109801764 NA TTS (NM_145156) TTS (NM_145156) 11595 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-7 chr11 67536113 67536636 + 1.77631109801764 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) 3376 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-9 chr8 25543490 25543877 + 1.77631109801764 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 12400 NR_110510 102633315 Mm.437828 NR_110510 ENSMUSG00000086134 Gm16159 - predicted gene 16159 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-19 chr2 73593131 73593550 + 1.77631109801764 NA Intergenic Intergenic -3186 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-2 chr1 158711941 158712136 + 1.77631109801764 NA 3' UTR (NM_001085376, exon 22 of 22) 3' UTR (NM_001085376, exon 22 of 22) 206413 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-29 chr7 78897778 78898339 + 1.77631109801764 NA intron (NM_001360709, intron 1 of 3) intron (NM_001360709, intron 1 of 3) 2000 NM_001360709 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-12 chr15 83407900 83408153 + 1.77631109801764 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 24824 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-3 chr15 75215764 75216153 + 1.77631109801764 NA Intergenic Intergenic -52463 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-8 chr4 88868089 88868307 + 1.77631109801764 NA Intergenic CpG 12003 NM_177348 230405 Mm.246593 NM_177348 ENSMUSG00000045364 Ifne Ifn-tau-1|Ifne1|Ifnt1|Infe1 interferon epsilon protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-11 chr14 25380113 25380476 + 1.77631109801764 NA Intergenic Intergenic -78891 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-7 chr4 40851135 40851555 + 1.77631109801764 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) -1207 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-30 chr8 26830055 26830438 + 1.77631109801764 NA Intergenic Intergenic -5823 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-11 chr8 103222167 103222715 + 1.77631109801764 NA Intergenic Intergenic 125093 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-14 chr16 37944271 37944792 + 1.77631109801764 NA intron (NM_153394, intron 1 of 9) intron (NM_153394, intron 1 of 9) 28035 NM_153394 239845 Mm.228018 NM_153394 ENSMUSG00000046961 Gpr156 Gababl G protein-coupled receptor 156 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-22 chr2 180960085 180960387 + 1.77631109801764 NA Intergenic Intergenic -5537 NM_021426 58237 Mm.40361 NM_021426 ENSMUSG00000027574 Nkain4 AB030182|C030019F02Rik Na+/K+ transporting ATPase interacting 4 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-10 chr8 77513287 77513608 + 1.77631109801764 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -3609 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-9 chr12 76556969 76557403 + 1.77631109801764 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -9261 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-13 chr16 20517827 20518096 + 1.77631109801764 NA intron (NM_007889, intron 1 of 14) intron (NM_007889, intron 1 of 14) 975 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 b2b2866Clo dishevelled segment polarity protein 3 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-23 chr3 65296677 65296991 + 1.77631109801764 NA intron (NM_001357358, intron 3 of 13) intron (NM_001357358, intron 3 of 13) 5851 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-5 chr19 16022532 16022857 + 1.77631109801764 NA Intergenic Intergenic 37619 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-24 chr3 107755411 107755835 + 1.77631109801764 NA intron (NM_007778, intron 2 of 8) intron (NM_007778, intron 2 of 8) 4846 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-15 chr16 45097306 45097777 + 1.77631109801764 NA intron (NM_026439, intron 2 of 7) intron (NM_026439, intron 2 of 7) 3530 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-21 chr2 158225217 158225508 + 1.77631109801764 NA intron (NM_001131021, intron 1 of 15) intron (NM_001131021, intron 1 of 15) 3862 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-4 chr16 55553351 55553580 + 1.77631109801764 NA Intergenic Intergenic 58734 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-28 chr6 143915810 143916215 + 1.77631109801764 NA intron (NM_011444, intron 8 of 14) intron (NM_011444, intron 8 of 14) 31094 NM_001347506 20678 Mm.1752 NM_011444 ENSMUSG00000041540 Sox5 A730017D01Rik|AI528773 SRY (sex determining region Y)-box 5 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-6 chr11 59383086 59383439 + 1.77631109801764 NA Intergenic Intergenic -7609 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-25 chr3 130949820 130950130 + 1.77631109801764 NA Intergenic Intergenic -160322 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-3 chr10 66920988 66921304 + 1.77631109801764 NA promoter-TSS (NR_138560) promoter-TSS (NR_138560) -762 NR_138561 68488 Mm.338835 NR_138560 1110002J07Rik - RIKEN cDNA 1110002J07 gene ncRNA unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-18 chr19 43499440 43499695 + 1.77631109801764 NA TTS (NM_010324) TTS (NM_010324) 25038 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-4 chr8 67724948 67725226 + 1.77631109801764 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 93208 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-2 chr10 31463735 31464135 + 1.77631109801764 NA Intergenic Intergenic -17977 NM_001359366 21987 Mm.439966 NM_009413 ENSMUSG00000000296 Tpd52l1 D53 tumor protein D52-like 1 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-5 chr11 48834025 48834336 + 1.77631109801764 NA intron (NM_053166, intron 1 of 6) intron (NM_053166, intron 1 of 6) -3291 NM_001347446 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764-6 chr2 10301617 10301936 + 1.77631109801764 NA Intergenic Intergenic -68675 NM_001198808 353282 Mm.329991 NM_177386 ENSMUSG00000061186 Sfmbt2 D2Wsu23e|D330030P06Rik Scm-like with four mbt domains 2 protein-coding unique_peak2_9_22_-1.46681003351209_3.79015693930097_1.77631109801764 chr1 138289838 138290205 + 1.77631109801764 NA TTS (NM_177397) TTS (NM_177397) 16283 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-17 chr19 24996178 24996728 + 1.77631109801764 NA Intergenic Intergenic -3076 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-10 chr13 94141310 94141613 + 1.77631109801764 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 83665 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-26 chr5 34369150 34369550 + 1.77631109801764 NA promoter-TSS (NM_001243123) promoter-TSS (NM_001243123) -583 NM_001243123 231128 Mm.286885 NM_001030306 ENSMUSG00000037210 Fam193a - family with sequence similarity 193, member A protein-coding common_peak1_26_8_1.30967682903109_3.82476341595786_1.77631109801764-3 chr2 75702843 75703118 + 1.77631109801764 NA intron (NR_132727, intron 1 of 1) intron (NR_132727, intron 1 of 1) 1683 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak2_94_114_-0.563724677218594_6.56362771233508_1.77548531428218 chr8 110792804 110793905 + 1.77548531428218 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 12570 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_93_48_0.651896479613602_5.94065808392201_1.77539305996384 chr11 115829276 115830484 + 1.77539305996384 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 5822 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak2_57_77_-0.710489197484982_5.93015762011976_1.77539305996384 chr9 82829557 82830492 + 1.77539305996384 NA 5' UTR (NM_022986, exon 1 of 4) 5' UTR (NM_022986, exon 1 of 4) 218 NM_001168240 65099 Mm.41415 NM_022986 ENSMUSG00000032251 Irak1bp1 4921528N06Rik|AI851240|Aabp3|Aip70|Simpl interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding common_peak1_111_60_0.58685179708255_6.22416323610416_1.7749191077934 chr7 123082697 123084338 + 1.7749191077934 NA Intergenic Intergenic -40368 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak2_72_92_-0.634743375542104_6.22178712333698_1.77491910779339 chr2 181591730 181593206 + 1.77491910779339 NA promoter-TSS (NM_001164597) promoter-TSS (NM_001164597) -7 NM_001164597 269401 Mm.386888 NM_001164597 ENSMUSG00000000823 Zfp512b Gm632|Znf512b zinc finger protein 512B protein-coding common_peak1_72_92_-0.634743375542104_6.22178712333698_1.77491910779339 chr6 6577917 6578636 + 1.77491910779339 NA intron (NM_009169, intron 1 of 2) intron (NM_009169, intron 1 of 2) 382 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Sem1 DSS1|Shfdg1|Shfg|Shfm1 SEM1, 26S proteasome complex subunit protein-coding unique_peak2_37_55_-0.838191467512456_5.38825918830138_1.77490324686544 chr17 70996429 70997677 + 1.77490324686544 NA intron (NM_026064, intron 1 of 3) intron (NM_026064, intron 1 of 3) 959 NM_001357820 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_37_55_-0.838191467512456_5.38825918830138_1.77490324686544 chr4 106839198 106839787 + 1.77490324686544 NA Intergenic CpG -34485 NM_001347159 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak1_66_31_0.781553017640388_5.39077650882019_1.77490324686543 chr19 57273710 57274598 + 1.77490324686543 NA intron (NR_045319, intron 1 of 2) intron (NR_045319, intron 1 of 2) 194 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA common_peak2_66_31_0.781553017640388_5.39077650882019_1.77490324686543 chr13 54564940 54565349 + 1.77490324686543 NA intron (NM_133797, intron 1 of 8) CpG 238 NM_001252647 97820 Mm.24593 NM_133797 ENSMUSG00000025871 4833439L19Rik 4930558H15Rik|C81457|Kiaa1191|P33monox RIKEN cDNA 4833439L19 gene protein-coding common_peak2_107_126_-0.523192815445251_6.72708827904954_1.77406540505694 chr16 23450381 23451909 + 1.77406540505694 NA TTS (NM_008555) TTS (NM_008555) 22012 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_146_83_0.514821343241504_6.64972809439951_1.77365461199904 chr6 89361128 89362335 + 1.77365461199904 NA intron (NM_008881, intron 1 of 31) CpG 882 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak2_101_120_-0.535251757283933_6.65123735863263_1.77365461199901 chr10 7157427 7159076 + 1.77365461199901 NA intron (NM_172546, intron 2 of 12) intron (NM_172546, intron 2 of 12) 53986 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_101_120_-0.535251757283933_6.65123735863263_1.77365461199901 chr11 95088378 95089695 + 1.77365461199901 NA Intergenic Intergenic -12225 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_67_87_-0.65665574087409_6.13110374820025_1.77197050827651 chr1 31156215 31156996 + 1.77197050827651 NA intron (NR_033445, intron 2 of 2) intron (NR_033445, intron 2 of 2) -19830 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding common_peak2_105_56_0.605825061531875_6.13580254493068_1.77197050827651 chr4 139092270 139092963 + 1.77197050827651 NA intron (NM_008675, intron 1 of 3) CpG 354 NM_008675 17965 Mm.9404 NM_008675 ENSMUSG00000041120 Nbl1 D4H1S1733E|DAN|Dana|NO3 neuroblastoma, suppression of tumorigenicity 1 protein-coding common_peak1_99_52_0.627323428015865_6.04158216857113_1.77191619822758 chr8 122184131 122185264 + 1.77191619822758 NA Intergenic Intergenic -97444 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_83_103_-0.594960001694956_6.40295971729361_1.77011778727375 chr8 36663196 36664363 + 1.77011778727375 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -49836 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_186_110_0.457495369792366_7.02316355124629_1.76937126886395 chr15 76198937 76200233 + 1.76937126886395 NA promoter-TSS (NM_201392) promoter-TSS (NM_201392) -179 NM_201392 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_49_68_-0.74622559462586_5.73541165946524_1.76855543704322 chr11 101082693 101083225 + 1.76855543704322 NA intron (NR_155015, intron 1 of 8) intron (NR_155015, intron 1 of 8) 394 NR_155015 71743 Mm.182271 NM_027896 ENSMUSG00000001755 Coasy 1300003G02Rik|Dpck|Ppat|Ukr1 Coenzyme A synthase protein-coding common_peak2_49_68_-0.74622559462586_5.73541165946524_1.76855543704322 chr5 111330788 111331264 + 1.76855543704322 NA intron (NM_001359216, intron 1 of 9) CpG 329 NM_001359216 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_120_139_-0.500972255968642_6.87879688896065_1.7677946847183 chr8 84020955 84022389 + 1.7677946847183 NA intron (NM_028877, intron 1 of 6) intron (NM_028877, intron 1 of 6) 198 NM_028877 74337 Mm.250943 NM_028877 ENSMUSG00000047986 Palm3 4432412L15Rik|AL024300 paralemmin 3 protein-coding common_peak2_141_159_-0.464362332753875_7.08974692851043_1.76705751721084 chr19 6951113 6952588 + 1.76705751721084 NA TTS (NM_007522) TTS (NM_007522) 9288 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak2_188_203_-0.40527442107045_7.46978813143627_1.76607200084999 chr11 69919391 69921317 + 1.76607200084999 NA 5' UTR (NM_001166596, exon 2 of 7) 5' UTR (NM_001166596, exon 2 of 7) 276 NM_001166590 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak2_132_74_0.534948834050152_6.49629310752096_1.76360531712416 chr4 152411422 152412892 + 1.76360531712416 NA intron (NM_010598, intron 4 of 15) intron (NM_010598, intron 4 of 15) 36698 NM_001252655 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_119_65_0.572028466694188_6.33040835270555_1.76186337069789 chr3 81057817 81058580 + 1.76186337069789 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 21782 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_178_105_0.461357117773309_6.95859901344985_1.76184816245398 chr3 98373271 98375120 + 1.76184816245398 NA Intergenic Intergenic -8286 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_155_89_0.500410721206405_6.74205845693288_1.76028196328651 chr15 85675112 85676619 + 1.76028196328651 NA Intergenic Intergenic -27908 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_164_181_-0.435181716193546_7.29020378210192_1.76027131621462 chr5 103692473 103694079 + 1.76027131621462 NA Intergenic Intergenic -37544 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding common_peak1_140_79_0.525513831068903_6.58468501042181_1.76010540062269 chr14 27428684 27429902 + 1.76010540062269 NA exon (NM_001114879, exon 1 of 24) exon (NM_001114879, exon 1 of 24) 459 NM_001114879 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak2_140_79_0.525513831068903_6.58468501042181_1.76010540062269 chr19 60225993 60226657 + 1.76010540062269 NA non-coding (NR_152390, exon 1 of 4) non-coding (NR_152390, exon 1 of 4) 376 NR_152391 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak2_1210_863_0.173098628131028_9.84143681622898_1.75835259862562 chr18 75367407 75376391 + 1.75835259862562 NA intron (NM_001042660, intron 2 of 3) intron (NM_001042660, intron 2 of 3) 4534 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-22 chr14 8095597 8095815 + 1.75805390616669 NA Intergenic Intergenic -2505 NM_145458 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-53 chr5 134944314 134944524 + 1.75805390616669 NA TTS (NM_009903) TTS (NM_009903) 2515 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-31 chr9 67212965 67213181 + 1.75805390616669 NA Intergenic Intergenic 23653 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-69 chr8 71573292 71573585 + 1.75805390616669 NA intron (NM_001357180, intron 2 of 12) intron (NM_001357180, intron 2 of 12) 2844 NM_001357182 26457 Mm.38165 NM_011977 ENSMUSG00000031808 Slc27a1 FATP1|Fatp solute carrier family 27 (fatty acid transporter), member 1 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-11 chr14 29977875 29978083 + 1.75805390616669 NA promoter-TSS (NM_027493) promoter-TSS (NM_027493) -358 NM_027493 56249 Mm.215110 NM_027493 ENSMUSG00000015971 Actr8 5730542K05Rik|ARP8 ARP8 actin-related protein 8 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-6 chr1 183788492 183788687 + 1.75805390616669 NA intron (NR_151520, intron 2 of 2) intron (NR_151520, intron 2 of 2) 39612 NR_151520 102637191 Mm.417076 NR_151520 ENSMUSG00000103305 Gm34068 - predicted gene, 34068 ncRNA unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-21 chr4 151639465 151639706 + 1.75805390616669 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 222183 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-17 chr12 51376960 51377184 + 1.75805390616669 NA promoter-TSS (NM_029825) promoter-TSS (NM_029825) -441 NM_001306178 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-65 chr7 127024566 127024797 + 1.75805390616669 NA intron (NM_010772, intron 3 of 4) intron (NM_010772, intron 3 of 4) 1798 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-4 chr1 170868307 170868511 + 1.75805390616669 NA promoter-TSS (NM_001081304) promoter-TSS (NM_001081304) -638 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-34 chr2 70151271 70151477 + 1.75805390616669 NA intron (NM_177376, intron 8 of 34) intron (NM_177376, intron 8 of 34) 112248 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-4 chr11 86992024 86992243 + 1.75805390616669 NA intron (NM_001005341, intron 1 of 4) intron (NM_001005341, intron 1 of 4) 1629 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-16 chr17 87314634 87314849 + 1.75805390616669 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 31855 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-42 chr3 159731459 159731686 + 1.75805390616669 NA Intergenic Intergenic -108078 NM_026582 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-11 chr11 67531487 67531677 + 1.75805390616669 NA Intergenic ID4_|SINE|ID -1416 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-76 chr8 128462654 128462852 + 1.75805390616669 NA intron (NM_001358959, intron 8 of 16) intron (NM_001358959, intron 8 of 16) 103512 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-10 chr13 28651589 28651799 + 1.75805390616669 NA intron (NR_045054, intron 5 of 7) intron (NR_045054, intron 5 of 7) 59179 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-14 chr11 88521810 88522022 + 1.75805390616669 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -97335 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-52 chr5 130254242 130254433 + 1.75805390616669 NA intron (NM_023248, intron 1 of 4) intron (NM_023248, intron 1 of 4) 1193 NM_023248 66711 Mm.280484 NM_023248 ENSMUSG00000025337 Sbds 4733401P19Rik|AI836084|CGI-97|SDS SBDS ribosome maturation factor protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-28 chr7 112251904 112252105 + 1.75805390616669 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 26168 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-30 chr18 62662613 62662857 + 1.75805390616669 NA intron (NM_001168423, intron 1 of 4) intron (NM_001168423, intron 1 of 4) -66471 NM_001001803 408198 Mm.478742 NM_001001803 ENSMUSG00000060201 Spink7 EG408198|Ecg2 serine peptidase inhibitor, Kazal type 7 (putative) protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-27 chr17 84320840 84321035 + 1.75805390616669 NA intron (NM_183021, intron 28 of 37) intron (NM_183021, intron 28 of 37) -132990 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-15 chr11 104613955 104614194 + 1.75805390616669 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 6074 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-43 chr4 16159886 16160073 + 1.75805390616669 NA intron (NR_138102, intron 1 of 11) intron (NR_138102, intron 1 of 11) 3664 NM_138952 192656 Mm.112765 NM_138952 ENSMUSG00000041135 Ripk2 2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2 receptor (TNFRSF)-interacting serine-threonine kinase 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-71 chr8 81869213 81869429 + 1.75805390616669 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 526759 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-51 chr5 34084020 34084211 + 1.75805390616669 NA intron (NM_001289803, intron 14 of 23) intron (NM_001289803, intron 14 of 23) -34625 NR_040703 75357 Mm.410806 NR_040703 ENSMUSG00000106902 4930557J02Rik - RIKEN cDNA 4930557J02 gene ncRNA unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-17 chr19 3818853 3819086 + 1.75805390616669 NA TTS (NM_001167886) TTS (NM_001167886) -32804 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-25 chr5 149319897 149320152 + 1.75805390616669 NA Intergenic Intergenic 55020 NM_009663 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-66 chr7 142381672 142381867 + 1.75805390616669 NA intron (NM_009983, intron 4 of 8) intron (NM_009983, intron 4 of 8) 6101 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-24 chr15 11171705 11172015 + 1.75805390616669 NA intron (NM_175501, intron 3 of 23) intron (NM_175501, intron 3 of 23) 107087 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-19 chr2 113640818 113641126 + 1.75805390616669 NA intron (NM_001285459, intron 13 of 16) intron (NM_001285459, intron 13 of 16) -44118 NM_001287818 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-5 chr11 101777349 101777609 + 1.75805390616669 NA intron (NM_008815, intron 4 of 12) intron (NM_008815, intron 4 of 12) 7831 NM_008815 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-13 chr16 4891523 4891747 + 1.75805390616669 NA intron (NM_001357062, intron 1 of 17) intron (NM_001357062, intron 1 of 17) 5535 NM_001357061 17237 Mm.291326 NM_029657 ENSMUSG00000022517 Mgrn1 2610042J20Rik|mKIAA0544|md|nc mahogunin, ring finger 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-8 chr10 21659270 21659556 + 1.75805390616669 NA Intergenic Intergenic -31432 NR_045843 432436 Mm.244553 NM_001004162 ENSMUSG00000056716 Gm5420 EG432436 predicted gene 5420 ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-13 chr11 77688189 77688429 + 1.75805390616669 NA intron (NM_001024205, intron 1 of 3) intron (NM_001024205, intron 1 of 3) 2170 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-28 chr18 38078396 38078583 + 1.75805390616669 NA Intergenic Intergenic -79520 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-79 chr9 58112238 58112491 + 1.75805390616669 NA intron (NM_001166282, intron 3 of 19) intron (NM_001166282, intron 3 of 19) 6459 NM_001166282 382077 Mm.335193 NM_029212 ENSMUSG00000037716 Ccdc33 4930535E21Rik|Gm1117|Tzip1 coiled-coil domain containing 33 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-9 chr12 104863961 104864160 + 1.75805390616669 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 1016 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669 chr1 43825640 43825934 + 1.75805390616669 NA intron (NM_026430, intron 1 of 14) intron (NM_026430, intron 1 of 14) 1921 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-10 chr14 31090658 31090899 + 1.75805390616669 NA intron (NM_001359857, intron 25 of 30) intron (NM_001359857, intron 25 of 30) 38152 NM_001308466 66487 Mm.379116 NM_001308091 ENSMUSG00000058351 Smim4 2010107H07Rik|Gm41122 small integral membrane protein 4 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-2 chr1 91083517 91083738 + 1.75805390616669 NA intron (NM_001310732, intron 7 of 24) intron (NM_001310732, intron 7 of 24) 30183 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-31 chr18 77941961 77942185 + 1.75805390616669 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 3606 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-60 chr7 19362534 19362783 + 1.75805390616669 NA intron (NM_001010836, intron 1 of 12) intron (NM_001010836, intron 1 of 12) 1442 NM_001010836 333654 Mm.333640 NM_001010836 ENSMUSG00000040734 Ppp1r13l AV260376|IASPP|Nkip1|wa3 protein phosphatase 1, regulatory (inhibitor) subunit 13 like protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-10 chr11 8591926 8592133 + 1.75805390616669 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 72506 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-44 chr4 33289736 33290026 + 1.75805390616669 NA Intergenic Intergenic -20430 NM_011884 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-23 chr6 94642872 94643092 + 1.75805390616669 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -36567 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-11 chr15 55187982 55188239 + 1.75805390616669 NA intron (NM_001037937, intron 4 of 8) intron (NM_001037937, intron 4 of 8) 54674 NM_001037937 97998 Mm.295397 NM_145470 ENSMUSG00000022419 Deptor Depdc6 DEP domain containing MTOR-interacting protein protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-30 chr8 84761278 84761497 + 1.75805390616669 NA intron (NM_001081982, intron 2 of 9) intron (NM_001081982, intron 2 of 9) 12982 NM_001081981 18032 Mm.9394 NM_010906 ENSMUSG00000001911 Nfix CTF|NF-I/X|NF1-X|NFI-X nuclear factor I/X protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-74 chr8 122997039 122997248 + 1.75805390616669 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 45141 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-6 chr11 60701882 60702095 + 1.75805390616669 NA intron (NM_008502, intron 1 of 20) intron (NM_008502, intron 1 of 20) 2298 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 LLGL1 scribble cell polarity complex component protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-8 chr12 77079004 77079206 + 1.75805390616669 NA Intergenic Intergenic -116857 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-37 chr2 167737647 167737841 + 1.75805390616669 NA Intergenic Intergenic 46567 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-13 chr15 82244189 82244418 + 1.75805390616669 NA promoter-TSS (NM_001080158) promoter-TSS (NM_001080158) 33 NM_001080158 66570 Mm.23596 NM_025639 ENSMUSG00000068101 Cenpm 2610019I03Rik|AI853711|Pane1 centromere protein M protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-61 chr7 44996881 44997076 + 1.75805390616669 NA promoter-TSS (NM_016849) promoter-TSS (NM_016849) 601 NM_029410 75736 Mm.261006 NM_029410 ENSMUSG00000003190 Bcl2l12 2810475P17Rik|5430429M05Rik|Bcl-L12|Bcl2-L12 BCL2-like 12 (proline rich) protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-8 chr13 45751443 45751692 + 1.75805390616669 NA intron (NM_001199304, intron 4 of 6) intron (NM_001199304, intron 4 of 6) 213424 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-49 chr4 149876761 149876964 + 1.75805390616669 NA Intergenic Intergenic 78144 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-32 chr2 27316316 27316657 + 1.75805390616669 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -69183 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-20 chr13 71980190 71980440 + 1.75805390616669 NA Intergenic Intergenic -16592 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-68 chr8 31727287 31727583 + 1.75805390616669 NA Intergenic Intergenic 190768 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-5 chr10 19200078 19200313 + 1.75805390616669 NA intron (NR_038021, intron 3 of 3) intron (NR_038021, intron 3 of 3) 32957 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-3 chr11 60540276 60540592 + 1.75805390616669 NA intron (NM_172943, intron 1 of 3) intron (NM_172943, intron 1 of 3) 2751 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-73 chr8 94226923 94227127 + 1.75805390616669 NA intron (NM_172410, intron 2 of 22) intron (NM_172410, intron 2 of 22) 12461 NM_172410 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-22 chr5 43982788 43983067 + 1.75805390616669 NA Intergenic Intergenic -1128 NM_001271616 14181 Mm.46053 NM_008009 ENSMUSG00000048373 Fgfbp1 FGF-BP|FGF-BP1|FGFBP-1 fibroblast growth factor binding protein 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-28 chr8 91398459 91398661 + 1.75805390616669 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 85035 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-19 chr2 68884553 68884841 + 1.75805390616669 NA intron (NM_001347161, intron 1 of 10) intron (NM_001347161, intron 1 of 10) 23256 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-84 chrX 152716497 152716701 + 1.75805390616669 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 52887 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-77 chr9 35364615 35364808 + 1.75805390616669 NA Intergenic Intergenic 83606 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-38 chr3 37355842 37356029 + 1.75805390616669 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 7282 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-29 chr7 130050799 130051078 + 1.75805390616669 NA Intergenic Intergenic 88773 NR_046077 100043150 Mm.334264 NR_046077 ENSMUSG00000108504 Gm4265 - predicted gene 4265 ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-81 chr9 97511864 97512064 + 1.75805390616669 NA intron (NM_022319, intron 8 of 17) intron (NM_022319, intron 8 of 17) -142006 NM_030219 78911 Mm.108347 NM_030219 ENSMUSG00000032451 Trim42 4930486B16Rik tripartite motif-containing 42 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-9 chr13 45944186 45944395 + 1.75805390616669 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 20701 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-20 chr2 125624636 125624892 + 1.75805390616669 NA intron (NM_001081091, intron 1 of 27) intron (NM_001081091, intron 1 of 27) 349 NM_001081091 99100 Mm.330545 NM_001081091 ENSMUSG00000068394 Cep152 AI851464|mKIAA0912 centrosomal protein 152 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-62 chr7 110098664 110098907 + 1.75805390616669 NA Intergenic Intergenic -23274 NM_001355058 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-4 chr1 134408693 134408919 + 1.75805390616669 NA intron (NR_149307, intron 6 of 8) ID_B1|SINE|B4 3025 NR_149307 72017 Mm.280230 NM_028057 ENSMUSG00000026456 Cyb5r1 1500005G05Rik|B5R.1|C80155|Nqo3a2 cytochrome b5 reductase 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-29 chr8 94172890 94173156 + 1.75805390616669 NA intron (NM_008630, intron 1 of 2) intron (NM_008630, intron 1 of 2) 405 NM_008630 17750 Mm.147226 NM_008630 ENSMUSG00000031762 Mt2 AA409533|MT-II|Mt-2 metallothionein 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-45 chr4 64088435 64088650 + 1.75805390616669 NA Intergenic Intergenic -41527 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-26 chr7 37768311 37768555 + 1.75805390616669 NA intron (NM_172385, intron 1 of 5) intron (NM_172385, intron 1 of 5) 1319 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-18 chr19 25243995 25244218 + 1.75805390616669 NA intron (NM_181404, intron 1 of 13) intron (NM_181404, intron 1 of 13) 7131 NM_001348180 107351 Mm.260722 NM_181404 ENSMUSG00000032702 Kank1 A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172 KN motif and ankyrin repeat domains 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-72 chr8 90811165 90811361 + 1.75805390616669 NA Intergenic Intergenic -17572 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-26 chr17 36123903 36124133 + 1.75805390616669 NA Intergenic Intergenic -2574 NR_046286 15024 Mm.426031 NM_010395 ENSMUSG00000079491 H2-T10 H-2T10 histocompatibility 2, T region locus 10 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-63 chr7 121048478 121048762 + 1.75805390616669 NA intron (NM_021554, intron 2 of 4) PB1D9|SINE|Alu 14175 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-12 chr11 69837758 69837968 + 1.75805390616669 NA promoter-TSS (NM_026982) promoter-TSS (NM_026982) -662 NM_026982 69186 Mm.248772 NM_026982 ENSMUSG00000070394 Tmem256 1810027O10Rik|3110009M16Rik transmembrane protein 256 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-23 chr14 105662621 105662848 + 1.75805390616669 NA Intergenic Intergenic -38964 NR_105814 102465207 NR_105814 ENSMUSG00000098780 Mir6390 Gm27562|mmu-mir-6390 microRNA 6390 ncRNA unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-18 chr2 104479410 104479652 + 1.75805390616669 NA intron (NM_010434, intron 1 of 15) intron (NM_010434, intron 1 of 15) 14958 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-58 chr6 114929276 114929509 + 1.75805390616669 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -7571 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-25 chr7 143061738 143061968 + 1.75805390616669 NA intron (NM_133655, intron 1 of 7) intron (NM_133655, intron 1 of 7) -7515 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-82 chr9 111938599 111938796 + 1.75805390616669 NA Intergenic Intergenic 180014 NR_029823 723815 NR_029823 ENSMUSG00000065441 Mir128-2 Mirn128-2|Mirn128b|mir-128-2|mir-128b microRNA 128-2 ncRNA unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-16 chr17 25565501 25565706 + 1.75805390616669 NA TTS (NM_011447) TTS (NM_011447) 5083 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-9 chr10 111577874 111578129 + 1.75805390616669 NA Intergenic Intergenic 16272 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-46 chr4 129821841 129822109 + 1.75805390616669 NA intron (NM_001164745, intron 1 of 5) PB1D11|SINE|Alu 1267 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-5 chr1 180994427 180994712 + 1.75805390616669 NA intron (NM_010145, intron 5 of 8) intron (NM_010145, intron 5 of 8) 23000 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-12 chr15 66907349 66907603 + 1.75805390616669 NA intron (NM_018865, intron 2 of 4) intron (NM_018865, intron 2 of 4) 16083 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-30 chr8 123887795 123888051 + 1.75805390616669 NA Intergenic B1_Mm|SINE|Alu 6852 NM_001272041 11459 Mm.214950 NM_009606 ENSMUSG00000031972 Acta1 AA959943|Acta-2|Acts|Actsk-1 actin, alpha 1, skeletal muscle protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-3 chr1 170025364 170025618 + 1.75805390616669 NA intron (NM_022563, intron 2 of 16) intron (NM_022563, intron 2 of 16) 56082 NR_040438 67303 Mm.396611 NR_040438 ENSMUSG00000097503 3110045C21Rik AI838577 RIKEN cDNA 3110045C21 gene ncRNA unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-24 chr6 124804986 124805198 + 1.75805390616669 NA Intergenic B1_Mm|SINE|Alu -3569 NM_001306051 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-57 chr6 83316055 83316243 + 1.75805390616669 NA intron (NM_008638, intron 1 of 7) intron (NM_008638, intron 1 of 7) 1455 NM_008638 17768 Mm.443 NM_008638 ENSMUSG00000005667 Mthfd2 AW558851|NMDMC methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-39 chr3 79537363 79537763 + 1.75805390616669 NA intron (NM_001162999, intron 1 of 16) intron (NM_001162999, intron 1 of 16) 30116 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-20 chr2 137288080 137288414 + 1.75805390616669 NA Intergenic Intergenic -171727 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-15 chr17 13667700 13668054 + 1.75805390616669 NA Intergenic Intergenic -92664 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-35 chr2 118510824 118511027 + 1.75805390616669 NA Intergenic Intergenic -31229 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-15 chr17 79721021 79721258 + 1.75805390616669 NA Intergenic Intergenic -6098 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-7 chr11 74865304 74865546 + 1.75805390616669 NA exon (NM_197943, exon 10 of 23) exon (NM_197943, exon 10 of 23) 2769 NR_105891 102465558 NR_105891 ENSMUSG00000098317 Mir6926 Gm27949|mmu-mir-6926 microRNA 6926 ncRNA common_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669 chr3 157535670 157535871 + 1.75805390616669 NA intron (NM_001355381, intron 1 of 8) intron (NM_001355381, intron 1 of 8) 1605 NM_001355386 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-6 chr11 113027935 113028239 + 1.75805390616669 NA Intergenic Intergenic 173751 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-29 chr18 60618999 60619199 + 1.75805390616669 NA intron (NM_177340, intron 1 of 2) L2b|LINE|L2 5206 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-56 chr6 71927765 71927986 + 1.75805390616669 NA intron (NM_009088, intron 9 of 33) intron (NM_009088, intron 9 of 33) 18822 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-17 chr2 92372081 92372286 + 1.75805390616669 NA Intergenic Intergenic -1126 NM_001290775 228366 Mm.31158 NM_172670 ENSMUSG00000040434 Large2 5730485C17Rik|AI891893|Gyltl1b|Largel|mKIAA4105 LARGE xylosyl- and glucuronyltransferase 2 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-7 chr13 41002183 41002475 + 1.75805390616669 NA intron (NM_026550, intron 1 of 9) B3|SINE|B2 -1183 NR_155347 102633880 Mm.314757 NR_155347 A730081D07Rik - RIKEN cDNA A730081D07 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-55 chr5 144957454 144957681 + 1.75805390616669 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 8263 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-14 chr17 25731659 25731897 + 1.75805390616669 NA TTS (NM_001357176) TTS (NM_001357176) 4061 NM_001357176 106707 Mm.24603 NM_028009 ENSMUSG00000041199 Rpusd1 2310051D06Rik|AU019540|Rlucl RNA pseudouridylate synthase domain containing 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-2 chr1 89558415 89558633 + 1.75805390616669 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 103713 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-64 chr7 127015828 127016022 + 1.75805390616669 NA intron (NM_030240, intron 2 of 2) intron (NM_030240, intron 2 of 2) -1331 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-40 chr3 102682393 102682614 + 1.75805390616669 NA Intergenic Intergenic -52267 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-24 chr5 149182740 149183036 + 1.75805390616669 NA promoter-TSS (NR_015478) promoter-TSS (NR_015478) -852 NR_015478 433966 Mm.207047 NR_015478 ENSMUSG00000097191 5730422E09Rik - RIKEN cDNA 5730422E09 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-18 chr13 51116281 51116477 + 1.75805390616669 NA intron (NM_001283029, intron 1 of 5) intron (NM_001283029, intron 1 of 5) 14832 NM_001283029 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-70 chr8 73303879 73304076 + 1.75805390616669 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 49563 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-47 chr4 134992791 134992984 + 1.75805390616669 NA Intergenic MIRb|SINE|MIR 61907 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-2 chr10 12807291 12807548 + 1.75805390616669 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 54316 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-50 chr4 155731082 155731278 + 1.75805390616669 NA intron (NM_026899, intron 2 of 4) intron (NM_026899, intron 2 of 4) -3624 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-32 chr9 104260540 104260779 + 1.75805390616669 NA intron (NM_001359740, intron 1 of 56) intron (NM_001359740, intron 1 of 56) 2271 NM_001359740 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-67 chr8 9959724 9959953 + 1.75805390616669 NA Intergenic Intergenic 16485 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-22 chr6 50460031 50460275 + 1.75805390616669 NA Intergenic Intergenic -3799 NM_001347213 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669 chr1 58960108 58960332 + 1.75805390616669 NA intron (NM_172406, intron 1 of 15) intron (NM_172406, intron 1 of 15) 13262 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-23 chr5 134454630 134454883 + 1.75805390616669 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 1506 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-19 chr13 64312876 64313089 + 1.75805390616669 NA promoter-TSS (NM_025370) promoter-TSS (NM_025370) -272 NM_025370 66129 Mm.491110 NM_025370 ENSMUSG00000021482 Aaed1 1110018J18Rik|AI849003 AhpC/TSA antioxidant enzyme domain containing 1 protein-coding unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-14 chr16 86399413 86399846 + 1.75805390616669 NA Intergenic Intergenic 406884 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-27 chr8 33891381 33891616 + 1.75805390616669 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 38365 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-83 chr9 115294124 115294371 + 1.75805390616669 NA intron (NM_024222, intron 1 of 15) intron (NM_024222, intron 1 of 15) -12177 NR_029430 111186 Mm.484753 NR_029430 Stmn1-rs1 Lag-rs1|Lap18-rs1 stathmin 1, related sequence 1 pseudo unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-36 chr2 129204212 129204419 + 1.75805390616669 NA 3' UTR (NM_001159593, exon 6 of 6) 3' UTR (NM_001159593, exon 6 of 6) -2781 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-48 chr4 139229770 139229974 + 1.75805390616669 NA intron (NM_001271405, intron 1 of 8) ID4_|SINE|ID 35761 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-7 chr1 185230521 185230731 + 1.75805390616669 NA intron (NM_001163754, intron 2 of 34) intron (NM_001163754, intron 2 of 34) -12300 NR_034044 100217449 Mm.429560 NR_034044 ENSMUSG00000077571 Snora36b MBI-87 small nucleolar RNA, H/ACA box 36B snoRNA unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-12 chr14 45849376 45849579 + 1.75805390616669 NA Intergenic Intergenic -191334 NM_001042719 114874 Mm.121918 NM_176845 ENSMUSG00000037697 Ddhd1 Mir5131|PA-PLA1 DDHD domain containing 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-21 chr13 98891710 98891928 + 1.75805390616669 NA promoter-TSS (NM_001048267) promoter-TSS (NM_001048267) -777 NM_001048267 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-21 chr2 137594692 137594962 + 1.75805390616669 NA Intergenic Intergenic -478307 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-25 chr16 31067306 31067514 + 1.75805390616669 NA intron (NM_198626, intron 1 of 3) intron (NM_198626, intron 1 of 3) 14022 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-3 chr1 90425406 90425732 + 1.75805390616669 NA Intergenic B3A|SINE|B2 -177856 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-80 chr9 70264842 70265085 + 1.75805390616669 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 57613 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-78 chr9 56547259 56547458 + 1.75805390616669 NA Intergenic Intergenic 88290 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-16 chr12 40346731 40346950 + 1.75805390616669 NA intron (NM_178845, intron 4 of 11) intron (NM_178845, intron 4 of 11) 98950 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669 chr1 133685508 133685793 + 1.75805390616669 NA intron (NM_001159649, intron 2 of 5) MIR|SINE|MIR 4366 NM_172842 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-59 chr6 136499489 136499684 + 1.75805390616669 NA Intergenic Intergenic -19265 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-33 chr2 33224640 33224841 + 1.75805390616669 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 8779 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-41 chr3 147803323 147803553 + 1.75805390616669 NA Intergenic Intergenic 951071 NM_001302957 70892 Mm.187793 NM_027594 ENSMUSG00000036745 Ttll7 1110049N09Rik|4921517B04Rik|C630030B20|mTTLL7 tubulin tyrosine ligase-like family, member 7 protein-coding unique_peak2_3_10_-1.71528161527301_2.60179081100079_1.75805390616669-26 chr7 144448359 144448610 + 1.75805390616669 NA intron (NM_001357116, intron 10 of 15) intron (NM_001357116, intron 10 of 15) 22451 NM_007803 13043 Mm.205601 NM_007803 ENSMUSG00000031078 Cttn 1110020L01Rik|Ems1 cortactin protein-coding unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-54 chr5 144358667 144358859 + 1.75805390616669 NA promoter-TSS (NM_025833) promoter-TSS (NM_025833) 238 NR_102373 100579137 NR_102372 ENSMUSG00000104600 Dmrt1i Dmr Dmrt1 interacting ncRNA ncRNA unique_peak2_2_10_-2.12739103347231_2.39573610190114_1.75805390616669-27 chr7 49129395 49129611 + 1.75805390616669 NA intron (NR_154465, intron 3 of 3) intron (NR_154465, intron 3 of 3) 32655 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA unique_peak1_11_3_1.31793062601849_2.65896531300925_1.75805390616669-75 chr8 124652514 124652729 + 1.75805390616669 NA intron (NM_175149, intron 1 of 3) intron (NM_175149, intron 1 of 3) 10748 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak2_54_73_-0.710621064278011_5.85414283348995_1.75762453057467 chr18 60607462 60608670 + 1.75762453057467 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 2038 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_142_160_-0.463298324853484_7.09926771568787_1.75638581298335 chr13 55692828 55693820 + 1.75638581298335 NA 5' UTR (NM_181278, exon 1 of 2) 5' UTR (NM_181278, exon 1 of 2) 200 NM_181278 78521 Mm.28449 NM_181278 ENSMUSG00000045767 B230219D22Rik AA119856|D530037I19Rik RIKEN cDNA B230219D22 gene protein-coding common_peak2_204_123_0.429365176394198_7.16887889858397_1.75628873621368 chr7 66383532 66385671 + 1.75628873621368 NA intron (NM_146191, intron 1 of 33) intron (NM_146191, intron 1 of 33) -2877 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_77_38_0.713916578247075_5.64236050798579_1.75616704008205 chr5 113873447 113874050 + 1.75616704008205 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 34958 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_45_64_-0.7795145112322_5.63261055741235_1.75616704008205-2 chr17 79835336 79836006 + 1.75616704008205 NA Intergenic Intergenic 60452 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak2_45_64_-0.7795145112322_5.63261055741235_1.75616704008205 chr15 60837612 60838363 + 1.75616704008205 NA Intergenic Intergenic -12907 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak2_21_37_-1.06169713127328_4.71707894780694_1.75610071733785 chr17 80290332 80290650 + 1.75610071733785 NA promoter-TSS (NM_001163759) promoter-TSS (NM_001163759) -15 NM_001163759 106794 Mm.12412 NM_198942 ENSMUSG00000035051 Dhx57 AW494914 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 protein-coding common_peak1_21_37_-1.06169713127328_4.71707894780694_1.75610071733785 chr8 22685765 22685981 + 1.75610071733785 NA intron (NM_001159774, intron 5 of 21) intron (NM_001159774, intron 5 of 21) 20710 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding unique_peak2_21_37_-1.06169713127328_4.71707894780694_1.75610071733785 chr4 107553222 107553796 + 1.75610071733785 NA intron (NM_147221, intron 2 of 10) ID4_|SINE|ID 118790 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_21_37_-1.06169713127328_4.71707894780694_1.75610071733785-2 chr5 24871534 24872091 + 1.75610071733785 NA intron (NM_145401, intron 11 of 15) intron (NM_145401, intron 11 of 15) -29451 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_21_37_-1.06169713127328_4.71707894780694_1.75610071733785-2 chr9 108978273 108978711 + 1.75610071733785 NA intron (NM_007738, intron 99 of 117) intron (NM_007738, intron 99 of 117) -7671 NM_145077 171530 Mm.388865 NM_145077 ENSMUSG00000049699 Ucn2 Ucn II|Ucn-2|ucn-II urocortin 2 protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784 chr10 7120402 7120965 + 1.75610071733784 NA intron (NM_172546, intron 12 of 12) intron (NM_172546, intron 12 of 12) 91554 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-5 chr5 146883467 146884237 + 1.75610071733784 NA Intergenic Intergenic 38781 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-6 chr6 89350660 89351489 + 1.75610071733784 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 11539 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784 chr1 34851125 34851456 + 1.75610071733784 NA intron (NM_145516, intron 1 of 7) intron (NM_145516, intron 1 of 7) 1301 NM_001357425 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-3 chr14 70106223 70106615 + 1.75610071733784 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 6326 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-8 chr9 105076336 105077046 + 1.75610071733784 NA intron (NM_053159, intron 9 of 9) intron (NM_053159, intron 9 of 9) 23423 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-4 chr2 158140979 158141586 + 1.75610071733784 NA intron (NM_009373, intron 2 of 12) intron (NM_009373, intron 2 of 12) 5110 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-4 chr19 16998175 16998672 + 1.75610071733784 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 42305 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-7 chr7 79272186 79272945 + 1.75610071733784 NA promoter-TSS (NM_018811) promoter-TSS (NM_018811) -701 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-2 chr1 133952217 133952850 + 1.75610071733784 NA Intergenic Intergenic -31132 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-2 chr14 51932799 51933277 + 1.75610071733784 NA Intergenic Intergenic -10265 NM_001011687 497071 Mm.378602 NM_001011687 ENSMUSG00000068392 Rnase13 - ribonuclease, RNase A family, 13 (non-active) protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-6 chr6 94141868 94142554 + 1.75610071733784 NA intron (NR_130996, intron 1 of 1) intron (NR_130996, intron 1 of 1) 95231 NR_130996 78178 Mm.452749 NR_130996 ENSMUSG00000045095 4930511A08Rik - RIKEN cDNA 4930511A08 gene ncRNA unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-5 chr4 56374972 56375869 + 1.75610071733784 NA Intergenic Intergenic 366005 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-7 chr9 47283405 47283703 + 1.75610071733784 NA Intergenic Intergenic -246616 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_44_18_0.963440633982999_4.72964783043508_1.75610071733784-3 chr1 168427078 168427720 + 1.75610071733784 NA intron (NM_183355, intron 2 of 8) intron (NM_183355, intron 2 of 8) 4770 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak1_113_61_0.588747766812482_6.24857019379312_1.75549247027451 chr11 117114489 117115853 + 1.75549247027451 NA promoter-TSS (NR_029459) promoter-TSS (NR_029459) -1 NR_029459 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak1_113_61_0.588747766812482_6.24857019379312_1.75549247027451-2 chr6 29435169 29436290 + 1.75549247027451 NA intron (NM_001081185, intron 1 of 47) intron (NM_001081185, intron 1 of 47) 2473 NM_001311074 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding common_peak2_73_93_-0.63068309019344_6.23924730658092_1.7554924702745 chr11 116671654 116672540 + 1.7554924702745 NA promoter-TSS (NR_028569) promoter-TSS (NR_028569) -408 NR_028569 100216536 NR_028569 ENSMUSG00000065640 Snord1c - small nucleolar RNA, C/D box 1C snoRNA common_peak2_171_100_0.473921088311149_6.89517202690737_1.7554559391873 chr3 89962432 89964253 + 1.7554559391873 NA promoter-TSS (NM_001081182) promoter-TSS (NM_001081182) -10 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak2_52_23_0.860807554548704_5.01536627799551_1.75468591799224 chr11 51635518 51636086 + 1.75468591799224 NA promoter-TSS (NM_025346) promoter-TSS (NM_025346) 94 NM_025346 66089 Mm.288183 NM_025346 ENSMUSG00000001054 Rmnd5b 0610039K22Rik|Gid2 required for meiotic nuclear division 5 homolog B protein-coding common_peak2_27_44_-0.96015400253775_5.0117760950608_1.75468591799224-2 chr11 116335560 116336230 + 1.75468591799224 NA promoter-TSS (NM_008240) promoter-TSS (NM_008240) -541 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak1_52_23_0.860807554548704_5.01536627799551_1.75468591799224-5 chr5 139798133 139798501 + 1.75468591799224 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 6781 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_27_44_-0.96015400253775_5.0117760950608_1.75468591799224-4 chr17 84072377 84072924 + 1.75468591799224 NA Intergenic Intergenic -6010 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_53_23_0.887584350179004_5.02875467581066_1.75468591799224-2 chr9 98277339 98278107 + 1.75468591799224 NA Intergenic Intergenic -18847 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak1_52_23_0.860807554548704_5.01536627799551_1.75468591799224-2 chr10 77394862 77395277 + 1.75468591799224 NA intron (NM_001024838, intron 1 of 11) intron (NM_001024838, intron 1 of 11) 23204 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding unique_peak2_27_44_-0.96015400253775_5.0117760950608_1.75468591799224 chr15 79463963 79464571 + 1.75468591799224 NA Intergenic Intergenic -22124 NM_001359863 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding unique_peak1_53_23_0.887584350179004_5.02875467581066_1.75468591799224 chr4 134671432 134672458 + 1.75468591799224 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 32345 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_52_23_0.860807554548704_5.01536627799551_1.75468591799224-4 chr14 69396079 69396976 + 1.75468591799224 NA Intergenic Intergenic 59376 NM_001359160 100862375 Mm.489765 NM_001359159 ENSMUSG00000022066 Entpd4b Gm21685 ectonucleoside triphosphate diphosphohydrolase 4B protein-coding common_peak1_52_23_0.860807554548704_5.01536627799551_1.75468591799224 chr10 68234812 68235457 + 1.75468591799224 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 43592 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_27_44_-0.96015400253775_5.0117760950608_1.75468591799224-3 chr13 34077398 34077975 + 1.75468591799224 NA intron (NM_009450, intron 1 of 3) intron (NM_009450, intron 1 of 3) 322 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding common_peak1_52_23_0.860807554548704_5.01536627799551_1.75468591799224-3 chr11 8533751 8534278 + 1.75468591799224 NA intron (NM_001083587, intron 10 of 30) intron (NM_001083587, intron 10 of 30) 130521 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_53_23_0.887584350179004_5.02875467581066_1.75468591799224 chr19 3998977 3999597 + 1.75468591799224 NA 3' UTR (NM_011533, exon 8 of 8) 3' UTR (NM_011533, exon 8 of 8) -1293 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000110949 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak1_53_23_0.887584350179004_5.02875467581066_1.75468591799224 chr4 151635175 151636208 + 1.75468591799224 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 226077 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_27_44_-0.96015400253775_5.0117760950608_1.75468591799224-5 chr8 86888908 86889297 + 1.75468591799224 NA Intergenic Intergenic -3844 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_53_23_0.887584350179004_5.02875467581066_1.75468591799224-2 chr6 50419233 50419795 + 1.75468591799224 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 36656 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_27_44_-0.96015400253775_5.0117760950608_1.75468591799224 chr1 40542865 40543310 + 1.75468591799224 NA exon (NM_010553, exon 11 of 13) exon (NM_010553, exon 11 of 13) 27725 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_126_70_0.547892502069233_6.4236933705393_1.75301012809547 chr2 125122981 125123899 + 1.75301012809547 NA exon (NM_001162417, exon 1 of 19) exon (NM_001162417, exon 1 of 19) 220 NM_001162417 17876 Mm.18535 NM_010852 ENSMUSG00000027201 Myef2 9430071B01|mKIAA1341 myelin basic protein expression factor 2, repressor protein-coding common_peak2_59_78_-0.680303182551218_5.96362915690149_1.75175381483775 chr7 142094608 142095697 + 1.75175381483775 NA 5' UTR (NM_008748, exon 1 of 7) 5' UTR (NM_008748, exon 1 of 7) 132 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak1_94_49_0.637909183951057_5.96281078175025_1.75175381483774 chr3 122293035 122293804 + 1.75175381483774 NA TTS (NR_030439) TTS (NR_030439) 284 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak1_107_57_0.607510876199343_6.16173643322724_1.75136096541679 chr19 55569702 55570417 + 1.75136096541679 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 132145 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_129_147_-0.478368251566446_6.97026923984573_1.75019696721679 chr16 24433717 24435063 + 1.75019696721679 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -13701 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_199_213_-0.393278083395327_7.54482794470348_1.74911372281672 chr11 114850776 114852590 + 1.74911372281672 NA promoter-TSS (NM_147217) promoter-TSS (NM_147217) 143 NM_001110338 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding common_peak1_91_110_-0.558617544127095_6.51510709428656_1.74759956072526 chr1 71936120 71937428 + 1.74759956072526 NA Intergenic Intergenic 48662 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_188_112_0.446971958485857_7.04366494165812_1.74710304629481 chr4 139230879 139232552 + 1.74710304629481 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 37604 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_109_128_-0.51944993364556_6.75150228860047_1.74675540907439 chr5 30958897 30960761 + 1.74675540907439 NA intron (NM_001294302, intron 1 of 7) intron (NM_001294302, intron 1 of 7) 498 NM_001294302 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding common_peak1_156_90_0.49362267082571_6.75460597561155_1.74675540907439 chr3 95893969 95895135 + 1.74675540907439 NA intron (NM_146104, intron 1 of 5) intron (NM_146104, intron 1 of 5) 631 NM_146134 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding unique_peak2_41_60_-0.818202641543507_5.52163601679113_1.74659365657992 chr8 128025187 128025737 + 1.74659365657992 NA Intergenic Intergenic 252763 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_42_60_-0.784494807353455_5.53848993388616_1.74659365657992-2 chr2 151977644 151978189 + 1.74659365657992 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 2303 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak2_41_60_-0.818202641543507_5.52163601679113_1.74659365657992 chr7 97510543 97511374 + 1.74659365657992 NA intron (NM_001358012, intron 11 of 22) intron (NM_001358012, intron 11 of 22) 30002 NM_001358012 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding common_peak2_42_60_-0.784494807353455_5.53848993388616_1.74659365657992 chr10 120636549 120637340 + 1.74659365657992 NA Intergenic MIR3|SINE|MIR -128788 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_42_60_-0.784494807353455_5.53848993388616_1.74659365657992-3 chr5 129007654 129008529 + 1.74659365657992 NA intron (NR_152615, intron 1 of 11) intron (NR_152615, intron 1 of 11) 481 NR_152615 13852 Mm.260716 NM_007941 ENSMUSG00000029428 Stx2 AW538950|Epim|G1-536-1|Syn-2|repro34 syntaxin 2 protein-coding common_peak1_42_60_-0.784494807353455_5.53848993388616_1.74659365657992 chr11 79704121 79704458 + 1.74659365657992 NA Intergenic CpG -7680 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA unique_peak1_72_35_0.734490434123614_5.53717021850412_1.74659365657991 chr1 97770113 97771067 + 1.74659365657991 NA promoter-TSS (NM_173760) promoter-TSS (NM_173760) 418 NM_001310773 252876 Mm.86090 NM_026250 ENSMUSG00000026333 Gin1 4930429M06Rik|8430411H10Rik|Gin-1|Zh2c2 gypsy retrotransposon integrase 1 protein-coding common_peak2_144_161_-0.452335062326722_7.11368247172126_1.74586897583175 chr14 7873001 7875166 + 1.74586897583175 NA intron (NM_001081427, intron 4 of 45) intron (NM_001081427, intron 4 of 45) 56126 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_143_161_-0.462248713358408_7.10872564620542_1.74586897583175 chr11 50210354 50212022 + 1.74586897583175 NA promoter-TSS (NM_011018) promoter-TSS (NM_011018) -368 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak1_149_85_0.509814730104421_6.68117211975431_1.7448856165603 chr11 99556385 99558096 + 1.7448856165603 NA promoter-TSS (NM_025720) promoter-TSS (NM_025720) -387 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding common_peak1_120_66_0.562221570518552_6.34719997571705_1.74391249584714-2 chr3 96263537 96264492 + 1.74391249584714 NA promoter-TSS (NM_033596) promoter-TSS (NM_033596) -697 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak1_120_66_0.562221570518552_6.34719997571705_1.74391249584714 chr15 89076136 89076964 + 1.74391249584714 NA promoter-TSS (NR_040417) promoter-TSS (NR_040417) 486 NM_001355617 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak2_79_99_-0.608269205949538_6.33972158679996_1.74391249584712 chr1 134099466 134099994 + 1.74391249584712 NA Intergenic Intergenic -11512 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_80_99_-0.590473736647111_6.34861932145117_1.74391249584712 chr7 64063682 64064847 + 1.74391249584712 NA Intergenic Intergenic -89571 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_123_141_-0.486352559525145_6.90657083974211_1.74332401553852 chr8 79639394 79640613 + 1.74332401553852 NA exon (NM_001256033, exon 1 of 21) exon (NM_001256033, exon 1 of 21) 327 NM_001081164 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-16 chr7 88544994 88545603 + 1.74319850844462 NA Intergenic Intergenic 115025 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding common_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-2 chr8 70880852 70881188 + 1.74319850844462 NA Intergenic RSINE1|SINE|B4 -7530 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-6 chr13 119142844 119143266 + 1.74319850844462 NA Intergenic Intergenic 265956 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-2 chr4 3938966 3939270 + 1.74319850844462 NA promoter-TSS (NM_019969) promoter-TSS (NM_019969) 230 NM_001285804 66433 Mm.27406 NM_181391 ENSMUSG00000042198 Chchd7 1810049H20Rik coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding common_peak2_29_10_1.17110092656183_4.04498208191821_1.74319850844462 chr8 122989556 122989766 + 1.74319850844462 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 52623 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462 chr1 155038987 155039414 + 1.74319850844462 NA Intergenic Intergenic 44064 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-11 chr3 88595095 88595391 + 1.74319850844462 NA Intergenic Intergenic 15635 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-8 chr17 24669047 24669502 + 1.74319850844462 NA promoter-TSS (NM_183149) promoter-TSS (NM_183149) -413 NM_001348231 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462 chr1 40437404 40437859 + 1.74319850844462 NA intron (NM_001294171, intron 1 of 7) intron (NM_001294171, intron 1 of 7) -1998 NM_001025602 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-2 chr1 164456211 164456555 + 1.74319850844462 NA intron (NM_009721, intron 1 of 5) intron (NM_009721, intron 1 of 5) 1972 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-6 chr6 92183704 92183945 + 1.74319850844462 NA intron (NM_025578, intron 1 of 3) CpG 199 NM_025578 64658 Mm.87062 NM_025578 ENSMUSG00000014551 Mrps25 2810429N01Rik|Rpms25 mitochondrial ribosomal protein S25 protein-coding common_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462 chr1 9629874 9630216 + 1.74319850844462 NA intron (NR_015470, intron 1 of 4) intron (NR_015470, intron 1 of 4) 1047 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-17 chr8 111875693 111876137 + 1.74319850844462 NA intron (NM_025781, intron 1 of 2) intron (NM_025781, intron 1 of 2) 760 NM_025781 66817 Mm.345350 NM_025781 ENSMUSG00000031953 Tmem170 9030409E16Rik|AA403674|D8Bwg1414e|Tmem170a transmembrane protein 170 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-5 chr11 116073068 116073478 + 1.74319850844462 NA intron (NM_001009573, intron 13 of 32) intron (NM_001009573, intron 13 of 32) 4688 NM_001009573 70450 Mm.259460 NM_001009573 ENSMUSG00000057948 Unc13d 2610108D09Rik|Jinx|Munc13-4|mFLJ00067 unc-13 homolog D (C. elegans) protein-coding unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-7 chr9 34997833 34998165 + 1.74319850844462 NA intron (NM_001190912, intron 4 of 15) intron (NM_001190912, intron 4 of 15) -118729 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-13 chr4 64123876 64124410 + 1.74319850844462 NA Intergenic Intergenic -77128 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-3 chr16 57750905 57751232 + 1.74319850844462 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 3669 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-7 chr16 45158307 45158594 + 1.74319850844462 NA promoter-TSS (NM_026402) promoter-TSS (NM_026402) 223 NM_001356453 74102 Mm.264984 NM_028756 ENSMUSG00000022664 Slc35a5 1010001J06Rik|AU021179|BB097433|D16Ertd450e|D730043G07Rik solute carrier family 35, member A5 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-3 chr11 48983673 48984100 + 1.74319850844462 NA Intergenic Intergenic -4488 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-12 chr4 12087326 12087679 + 1.74319850844462 NA intron (NR_110955, intron 1 of 28) intron (NR_110955, intron 1 of 28) 455 NM_177861 329795 Mm.475125 NM_177861 ENSMUSG00000049488 Tmem67 5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo transmembrane protein 67 protein-coding unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-4 chr2 61138456 61138891 + 1.74319850844462 NA Intergenic Intergenic -163522 NR_045335 100038493 Mm.388076 NR_045335 ENSMUSG00000075325 Gm13582 - predicted gene 13582 ncRNA unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-5 chr3 70804968 70805401 + 1.74319850844462 NA intron (NR_040556, intron 1 of 3) intron (NR_040556, intron 1 of 3) 2107 NR_040556 625901 Mm.366028 NR_040556 ENSMUSG00000097252 Gm6634 EG625901 predicted gene 6634 ncRNA unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-15 chr5 13417099 13417591 + 1.74319850844462 NA intron (NM_001243073, intron 2 of 17) intron (NM_001243073, intron 2 of 17) 18036 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462 chr2 125673625 125673966 + 1.74319850844462 NA 3' UTR (NM_025613, exon 1 of 1) 3' UTR (NM_025613, exon 1 of 1) 695 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-4 chr11 62648071 62648484 + 1.74319850844462 NA promoter-TSS (NM_175002) promoter-TSS (NM_175002) -228 NM_001357955 192976 Mm.339972 NM_198861 ENSMUSG00000046417 Lrrc75a Fam211a leucine rich repeat containing 75A protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-10 chr3 81106362 81106824 + 1.74319850844462 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 70177 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-9 chr18 61211108 61211438 + 1.74319850844462 NA intron (NM_007885, intron 1 of 3) CpG 323 NM_007885 13521 Mm.24803 NM_007885 ENSMUSG00000034320 Slc26a2 Dtd|ST-OB solute carrier family 26 (sulfate transporter), member 2 protein-coding unique_peak2_11_25_-1.3825090921226_4.00918517207979_1.74319850844462-2 chr15 57753448 57753801 + 1.74319850844462 NA intron (NM_199449, intron 1 of 3) intron (NM_199449, intron 1 of 3) 58957 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding unique_peak1_29_10_1.17110092656183_4.04498208191821_1.74319850844462-14 chr4 114360234 114360842 + 1.74319850844462 NA Intergenic Intergenic -46186 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak1_30_48_-0.937205324989182_5.14610718162062_1.7429888559758 chr13 107677204 107678024 + 1.7429888559758 NA Intergenic Intergenic -9783 NR_045900 72257 Mm.234155 NR_045900 ENSMUSG00000102000 1700006H21Rik - RIKEN cDNA 1700006H21 gene ncRNA common_peak2_31_48_-0.891724779470657_5.16884745437988_1.7429888559758 chr1 45501903 45502344 + 1.7429888559758 NA intron (NM_007737, intron 1 of 53) intron (NM_007737, intron 1 of 53) 1159 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding unique_peak2_31_48_-0.891724779470657_5.16884745437988_1.7429888559758-2 chr8 45598350 45599335 + 1.7429888559758 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -28909 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_30_48_-0.937205324989182_5.14610718162062_1.7429888559758-2 chr17 28344716 28345230 + 1.7429888559758 NA intron (NM_011566, intron 1 of 12) intron (NM_011566, intron 1 of 12) 5373 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak1_31_48_-0.891724779470657_5.16884745437988_1.7429888559758 chr11 60699676 60700039 + 1.7429888559758 NA 5' UTR (NM_001159405, exon 1 of 22) 5' UTR (NM_001159405, exon 1 of 22) 167 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 LLGL1 scribble cell polarity complex component protein-coding common_peak2_30_48_-0.937205324989182_5.14610718162062_1.7429888559758 chr12 103425490 103425900 + 1.7429888559758 NA promoter-TSS (NM_001159502) promoter-TSS (NM_001159502) 85 NM_001159502 27225 Mm.3935 NM_020494 ENSMUSG00000041645 Ddx24 1700055J08Rik|2510027P10Rik|AI649272 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 protein-coding unique_peak2_31_48_-0.891724779470657_5.16884745437988_1.7429888559758 chr4 25281267 25281698 + 1.7429888559758 NA intron (NM_026194, intron 1 of 18) intron (NM_026194, intron 1 of 18) 339 NM_026194 67490 Mm.226295 NM_026194 ENSMUSG00000040359 Ufl1 1810074P20Rik|AI429228|Kiaa0776|Maxer|Rcad|mKIAA0776 UFM1 specific ligase 1 protein-coding common_peak2_30_48_-0.937205324989182_5.14610718162062_1.7429888559758-3 chr18 37883805 37884227 + 1.7429888559758 NA intron (NM_007858, intron 16 of 26) intron (NM_007858, intron 16 of 26) -29356 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA common_peak1_57_26_0.820025519213798_5.16490026177037_1.74298885597579 chr4 129231223 129232117 + 1.74298885597579 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) -3759 NM_001285866 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak1_58_26_0.844513583159212_5.17714429374307_1.74298885597579-2 chr5 121837295 121837733 + 1.74298885597579 NA promoter-TSS (NM_008507) promoter-TSS (NM_008507) -655 NM_008507 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding unique_peak1_57_26_0.820025519213798_5.16490026177037_1.74298885597579 chr14 30693494 30694339 + 1.74298885597579 NA Intergenic Intergenic -20933 NM_019460 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak1_58_26_0.844513583159212_5.17714429374307_1.74298885597579 chr11 76589476 76589904 + 1.74298885597579 NA Intergenic Intergenic -11951 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_58_26_0.844513583159212_5.17714429374307_1.74298885597579-3 chr5 137610452 137611274 + 1.74298885597579 NA intron (NM_008788, intron 1 of 8) intron (NM_008788, intron 1 of 8) 541 NM_008788 18542 Mm.262345 NM_008788 ENSMUSG00000029718 Pcolce Astt-2|Astt2|P14|PCPE-1 procollagen C-endopeptidase enhancer protein protein-coding common_peak2_58_26_0.844513583159212_5.17714429374307_1.74298885597579-2 chr3 58646636 58647220 + 1.74298885597579 NA Intergenic Intergenic -5114 NR_004433 666680 Mm.422212 NR_004433 Gm8234 AU022133 spermine synthase pseudogene pseudo common_peak2_58_26_0.844513583159212_5.17714429374307_1.74298885597579 chr15 89591270 89591744 + 1.74298885597579 NA intron (NM_026817, intron 1 of 8) CpG 416 NM_026817 68708 Mm.23258 NM_026817 ENSMUSG00000022621 Rabl2 1110031N17Rik|AW549303|Rabl2a RAB, member RAS oncogene family-like 2 protein-coding common_peak2_83_42_0.679214961744038_5.76587223557412_1.74156632662937-2 chr6 142289728 142290464 + 1.74156632662937 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) -8329 NM_010491 15874 Mm.415 NM_010491 ENSMUSG00000041681 Iapp DAP islet amyloid polypeptide protein-coding common_peak2_50_69_-0.73861655738106_5.75997473825444_1.74156632662937-2 chr2 131351877 131352707 + 1.74156632662937 NA intron (NM_178607, intron 1 of 5) intron (NM_178607, intron 1 of 5) 600 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak2_50_69_-0.73861655738106_5.75997473825444_1.74156632662937 chr1 191182458 191183178 + 1.74156632662937 NA intron (NM_007498, intron 1 of 3) CpG 515 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak2_83_42_0.679214961744038_5.76587223557412_1.74156632662937 chr3 21986752 21987586 + 1.74156632662937 NA Intergenic Intergenic -89483 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_83_42_0.679214961744038_5.76587223557412_1.74156632662937 chr14 20607248 20607876 + 1.74156632662937 NA 5' UTR (NM_030180, exon 2 of 21) 5' UTR (NM_030180, exon 2 of 21) 10792 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding common_peak2_38_56_-0.826516237482172_5.41963189542366_1.7405232834637-2 chr18 39490998 39491536 + 1.7405232834637 NA Intergenic CpG -4022 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_38_56_-0.826516237482172_5.41963189542366_1.7405232834637 chr17 80798692 80799510 + 1.7405232834637 NA Intergenic Intergenic -71076 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_67_32_0.758381758404754_5.42358499856083_1.74052328346369 chr2 141266903 141267788 + 1.74052328346369 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -595869 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_67_32_0.758381758404754_5.42358499856083_1.74052328346369 chr4 149955389 149956049 + 1.74052328346369 NA promoter-TSS (NM_029035) promoter-TSS (NM_029035) -713 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak1_67_32_0.758381758404754_5.42358499856083_1.74052328346369-2 chr7 127840954 127841555 + 1.74052328346369 NA promoter-TSS (NM_009294) promoter-TSS (NM_009294) -554 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding unique_peak2_18_34_-1.15306458282657_4.55275072553168_1.74023246399357-3 chr8 124138396 124138931 + 1.74023246399357 NA Intergenic Intergenic -92731 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-5 chr8 107492741 107493464 + 1.74023246399357 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) 56704 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357 chr10 23787916 23788506 + 1.74023246399357 NA Intergenic Intergenic -1002 NM_011295 20042 Mm.371846 NM_011295 ENSMUSG00000061983 Rps12 - ribosomal protein S12 protein-coding unique_peak2_18_34_-1.15306458282657_4.55275072553168_1.74023246399357-2 chr11 121739891 121740356 + 1.74023246399357 NA Intergenic Intergenic 37696 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_40_16_0.990551705923343_4.58273869421201_1.74023246399357 chr11 87462024 87462265 + 1.74023246399357 NA intron (NM_001199293, intron 2 of 30) CpG 34553 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_40_16_0.990551705923343_4.58273869421201_1.74023246399357-2 chr3 95673670 95674176 + 1.74023246399357 NA Intergenic Intergenic 13994 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-3 chr5 149439859 149440487 + 1.74023246399357 NA intron (NM_001310765, intron 1 of 5) intron (NM_001310765, intron 1 of 5) 513 NM_001310765 75860 Mm.159605 NM_029464 ENSMUSG00000029660 Tex26 4930588N13Rik testis expressed 26 protein-coding common_peak2_18_34_-1.15306458282657_4.55275072553168_1.74023246399357-3 chr4 136122807 136123162 + 1.74023246399357 NA Intergenic Intergenic -20838 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-4 chr8 84555149 84555729 + 1.74023246399357 NA intron (NM_001252060, intron 17 of 47) MIRb|SINE|MIR 107413 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-6 chr8 110826659 110827416 + 1.74023246399357 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 11561 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357 chr17 70751304 70751695 + 1.74023246399357 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 95278 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_18_34_-1.15306458282657_4.55275072553168_1.74023246399357-2 chr2 102762714 102763174 + 1.74023246399357 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -16184 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA unique_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-2 chr10 121475486 121476041 + 1.74023246399357 NA intron (NM_138956, intron 1 of 4) CpG 487 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-2 chr2 11777075 11777386 + 1.74023246399357 NA promoter-TSS (NM_177268) promoter-TSS (NM_177268) 355 NM_001348234 50755 Mm.24088 NM_015792 ENSMUSG00000058594 Fbxo18 AU015756|Fbh1|Fbx18 F-box protein 18 protein-coding unique_peak1_40_16_0.990551705923343_4.58273869421201_1.74023246399357-3 chr14 50896475 50896932 + 1.74023246399357 NA Intergenic Intergenic -3448 NM_001166651 546611 Mm.390692 NM_001166651 ENSMUSG00000090799 Klhl33 EG546611 kelch-like 33 protein-coding unique_peak2_18_34_-1.15306458282657_4.55275072553168_1.74023246399357 chr11 3906284 3906924 + 1.74023246399357 NA TTS (NM_153142) TTS (NM_153142) 8060 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak2_18_34_-1.15306458282657_4.55275072553168_1.74023246399357 chr11 55469739 55470229 + 1.74023246399357 NA intron (NM_013716, intron 1 of 11) CpG 232 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_62_29_0.786479702638315_5.30013044692768_1.7388889233551 chr7 16419011 16419675 + 1.7388889233551 NA intron (NM_198631, intron 3 of 13) B4A|SINE|B4 18147 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_34_52_-0.876564462017395_5.2896382235545_1.7388889233551-2 chr11 86572660 86573986 + 1.7388889233551 NA Intergenic B1_Mus1|SINE|Alu 10835 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_62_29_0.786479702638315_5.30013044692768_1.7388889233551 chr8 127227884 127228637 + 1.7388889233551 NA intron (NM_001122850, intron 2 of 15) ID_B1|SINE|B4 -71352 NM_001013581 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak2_34_52_-0.876564462017395_5.2896382235545_1.7388889233551 chr1 128102387 128103056 + 1.7388889233551 NA promoter-TSS (NM_027678) promoter-TSS (NM_027678) -250 NM_027678 226409 Mm.425048 NM_027678 ENSMUSG00000036086 Zranb3 4933425L19Rik|AH2|AI316834|C730006D09 zinc finger, RAN-binding domain containing 3 protein-coding common_peak2_34_52_-0.876564462017395_5.2896382235545_1.7388889233551-3 chr16 45849418 45850104 + 1.7388889233551 NA Intergenic PB1D11|SINE|Alu -5010 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_180_107_0.450307087894658_6.9800410461108_1.73873097009175 chr13 51969166 51969923 + 1.73873097009175 NA Intergenic Intergenic 122869 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_116_135_-0.507308441913561_6.83380862029356_1.73768875758275 chr10 68277804 68280209 + 1.73768875758275 NA promoter-TSS (NM_023598) promoter-TSS (NM_023598) -280 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_164_96_0.472700081818022_6.83626288309614_1.73768875758275 chrX 96096185 96097680 + 1.73768875758275 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 887 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_75_94_-0.607747133359045_6.26598204165142_1.73657496321244-2 chr6 82892097 82893451 + 1.73657496321244 NA Intergenic B3A|SINE|B2 -10921 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak2_75_94_-0.607747133359045_6.26598204165142_1.73657496321244 chr11 86592159 86592963 + 1.73657496321244 NA intron (NM_001356531, intron 10 of 11) PB1D10|SINE|Alu -8403 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_152_169_-0.444943853919584_7.18691900917791_1.7363382854181 chr9 25252633 25253864 + 1.7363382854181 NA intron (NM_001359738, intron 1 of 12) CpG 356 NM_001359738 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak2_86_105_-0.572171830958478_6.44183453908396_1.73629885863219 chr12 80643094 80644397 + 1.73629885863219 NA promoter-TSS (NM_026244) promoter-TSS (NM_026244) 366 NM_007951 13877 Mm.246551 NM_007951 ENSMUSG00000021131 Erh Mer|Prei1 ERH mRNA splicing and mitosis factor protein-coding common_peak1_128_71_0.550098151421331_6.44497407715298_1.73629885863216 chr15 80910708 80912209 + 1.73629885863216 NA intron (NM_177124, intron 14 of 21) intron (NM_177124, intron 14 of 21) -28581 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_189_113_0.441820379987797_7.05380020415864_1.73622136391718 chr18 84684203 84685556 + 1.73622136391718 NA intron (NM_023149, intron 1 of 11) intron (NM_023149, intron 1 of 11) 823 NM_023149 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_110_129_-0.517626449316801_6.76355458837005_1.73347859067709 chr16 32002455 32003624 + 1.73347859067709 NA 5' UTR (NM_177103, exon 1 of 10) 5' UTR (NM_177103, exon 1 of 10) 248 NM_001357087 320213 Mm.152890 NM_023801 ENSMUSG00000022772 Senp5 6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3 SUMO/sentrin specific peptidase 5 protein-coding common_peak2_89_46_0.649724316175702_5.87945100976549_1.73288746707145 chr19 4208847 4209544 + 1.73288746707145 NA Intergenic Intergenic -5043 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak1_89_46_0.649724316175702_5.87945100976549_1.73288746707145 chr14 45462980 45463977 + 1.73288746707145 NA intron (NM_001360526, intron 12 of 15) intron (NM_001360526, intron 12 of 15) 66587 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak2_55_74_-0.7041745762772_5.87673140235728_1.73288746707145-2 chr6 70844536 70845266 + 1.73288746707145 NA exon (NM_010121, exon 1 of 17) exon (NM_010121, exon 1 of 17) 386 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak2_55_74_-0.7041745762772_5.87673140235728_1.73288746707145 chr13 21180292 21181587 + 1.73288746707145 NA intron (NM_009054, intron 1 of 7) CpG 1008 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding unique_peak1_89_46_0.649724316175702_5.87945100976549_1.73288746707145 chr6 85915308 85916525 + 1.73288746707145 NA promoter-TSS (NM_023160) promoter-TSS (NM_023160) -55 NM_001362065 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding common_peak2_92_111_-0.556069780277367_6.52932003191892_1.73194242116227 chr5 31201090 31202313 + 1.73194242116227 NA TTS (NM_008014) TTS (NM_008014) 341 NM_001177901 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding common_peak1_173_102_0.462193116848259_6.91759708560735_1.73139373313495 chr8 79293551 79294849 + 1.73139373313495 NA promoter-TSS (NR_045822) promoter-TSS (NR_045822) 756 NM_133823 109136 Mm.26510 NM_133823 ENSMUSG00000037022 Mmaa 2810018E08Rik|AI840684 methylmalonic aciduria (cobalamin deficiency) type A protein-coding common_peak2_124_142_-0.484970555445446_6.91738605905567_1.73139373313493 chr15 53346387 53347368 + 1.73139373313493 NA promoter-TSS (NM_010162) promoter-TSS (NM_010162) -694 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_108_58_0.596051835766604_6.18066896724514_1.73132536833495 chr3 145631380 145632929 + 1.73132536833495 NA Intergenic ID_B1|SINE|B4 17831 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-8 chr7 141041445 141042015 + 1.73082168901047 NA Intergenic Intergenic -19544 NM_177897 330671 Mm.133741 NM_177897 ENSMUSG00000055629 B4galnt4 BC038881|Gm1095|beta4GalNAcT4 beta-1,4-N-acetyl-galactosaminyl transferase 4 protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-2 chr16 34926843 34927178 + 1.73082168901047 NA intron (NM_139300, intron 16 of 31) intron (NM_139300, intron 16 of 31) 12319 NR_040536 76649 Mm.420532 NR_040536 ENSMUSG00000100593 1700119H24Rik - RIKEN cDNA 1700119H24 gene ncRNA unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-9 chr8 120562464 120562830 + 1.73082168901047 NA exon (NM_198671, exon 3 of 16) exon (NM_198671, exon 3 of 16) 23951 NR_106159 102466849 NR_106159 ENSMUSG00000098280 Mir7687 Gm27573|mmu-mir-7687 microRNA 7687 ncRNA unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-3 chr2 60876631 60877317 + 1.73082168901047 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 4464 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-4 chr2 85051625 85052159 + 1.73082168901047 NA intron (NM_001081260, intron 2 of 11) intron (NM_001081260, intron 2 of 11) 1432 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047 chr1 135938811 135939247 + 1.73082168901047 NA Intergenic Intergenic -19822 NM_019645 18772 Mm.4494 NM_019645 ENSMUSG00000026413 Pkp1 - plakophilin 1 protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-5 chr2 148290322 148290788 + 1.73082168901047 NA Intergenic Intergenic -104822 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-6 chr5 99979254 99979659 + 1.73082168901047 NA promoter-TSS (NM_001077267) promoter-TSS (NM_001077267) -518 NM_001077267 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding unique_peak2_16_31_-1.1831141630903_4.40844291845485_1.73082168901047-7 chr6 100800127 100800619 + 1.73082168901047 NA intron (NM_198612, intron 6 of 6) B4|SINE|B4 -33265 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-2 chr11 31402611 31403049 + 1.73082168901046 NA Intergenic Intergenic -32769 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046 chr15 55265316 55265746 + 1.73082168901046 NA Intergenic Intergenic -42219 NM_181277 12818 Mm.297859 NM_181277 ENSMUSG00000022371 Col14a1 5730412L22Rik|AW108078 collagen, type XIV, alpha 1 protein-coding common_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-4 chr9 14054130 14054506 + 1.73082168901046 NA Intergenic Intergenic -221983 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-2 chr5 117120541 117121002 + 1.73082168901046 NA intron (NM_001199685, intron 1 of 20) CpG 642 NM_001199685 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding unique_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-4 chr7 118128999 118129436 + 1.73082168901046 NA intron (NM_019419, intron 1 of 5) intron (NM_019419, intron 1 of 5) 408 NM_019419 54208 Mm.29924 NM_019419 ENSMUSG00000030654 Arl6ip1 AIP-6|AL022945|ARMER|AU042858|Aip-1|Arl6ip|C85138|mKIAA0069 ADP-ribosylation factor-like 6 interacting protein 1 protein-coding common_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046 chr10 67187350 67187944 + 1.73082168901046 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 1897 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-5 chr3 126830068 126830425 + 1.73082168901046 NA intron (NM_001025438, intron 14 of 18) intron (NM_001025438, intron 14 of 18) 113140 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-6 chr5 134539742 134540450 + 1.73082168901046 NA intron (NM_001039162, intron 1 of 15) G-rich|Low_complexity|Low_complexity 12338 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-7 chr6 34384287 34384915 + 1.73082168901046 NA intron (NR_149754, intron 1 of 9) intron (NR_149754, intron 1 of 9) 354 NR_149754 67861 Mm.70371 NM_172398 ENSMUSG00000061758 Akr1b10 2310005E10Rik|Akr1b16 aldo-keto reductase family 1, member B10 (aldose reductase) protein-coding unique_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-6 chrX 142839766 142840450 + 1.73082168901046 NA intron (NM_001199357, intron 6 of 6) intron (NM_001199357, intron 6 of 6) 101108 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-3 chr11 114669807 114670263 + 1.73082168901046 NA intron (NM_001048058, intron 2 of 3) intron (NM_001048058, intron 2 of 3) 1254 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding common_peak2_37_14_1.06227285893663_4.43802702507683_1.73082168901046-2 chr6 90360130 90360372 + 1.73082168901046 NA intron (NM_144940, intron 18 of 19) intron (NM_144940, intron 18 of 19) -9243 NM_173002 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-2 chr17 75169043 75169632 + 1.73082168901046 NA intron (NM_019919, intron 4 of 33) intron (NM_019919, intron 4 of 33) -9444 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-6 chr7 89664784 89665047 + 1.73082168901046 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 32097 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-4 chr14 66104736 66105036 + 1.73082168901046 NA intron (NM_007940, intron 5 of 18) intron (NM_007940, intron 5 of 18) 5774 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-3 chr16 24475580 24476069 + 1.73082168901046 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) 27733 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046 chr13 94140510 94141010 + 1.73082168901046 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 82964 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046 chr1 135763706 135764218 + 1.73082168901046 NA Intergenic Intergenic -2123 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding unique_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-5 chr7 143015847 143016603 + 1.73082168901046 NA intron (NM_001128081, intron 5 of 6) intron (NM_001128081, intron 5 of 6) 10566 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-3 chr19 45009808 45010317 + 1.73082168901046 NA intron (NM_001348254, intron 2 of 4) intron (NM_001348254, intron 2 of 4) 945 NM_001348259 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding common_peak2_37_14_1.06227285893663_4.43802702507683_1.73082168901046 chr10 96618995 96619307 + 1.73082168901046 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 2150 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-5 chr3 144505614 144506026 + 1.73082168901046 NA intron (NM_001355234, intron 1 of 6) intron (NM_001355234, intron 1 of 6) 64396 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak1_36_14_1.02407014544892_4.41892566833298_1.73082168901046-4 chr3 107794172 107794715 + 1.73082168901046 NA Intergenic Intergenic -33974 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-3 chr6 100286993 100287357 + 1.73082168901046 NA intron (NM_019743, intron 1 of 4) CpG 183 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak1_37_14_1.06227285893663_4.43802702507683_1.73082168901046-2 chr11 100321222 100321776 + 1.73082168901046 NA 3' UTR (NM_011508, exon 4 of 4) 3' UTR (NM_011508, exon 4 of 4) 1550 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-11 chr9 84295873 84296461 + 1.73042999925837 NA Intergenic Intergenic 347386 NM_199195 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding common_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-3 chr2 32775865 32776237 + 1.73042999925837 NA promoter-TSS (NM_001290567) promoter-TSS (NM_001290567) 230 NM_178595 329384 Mm.268037 NM_178595 ENSMUSG00000053746 Ptrh1 2210013M04Rik|AW046744 peptidyl-tRNA hydrolase 1 homolog protein-coding common_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837 chr10 108307465 108307755 + 1.73042999925837 NA Intergenic Intergenic -24579 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837-6 chr7 98542446 98542904 + 1.73042999925837 NA Intergenic Intergenic 48453 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-8 chr4 126104820 126105200 + 1.73042999925837 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 1053 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-10 chr7 101011552 101011896 + 1.73042999925837 NA 5' UTR (NM_008773, exon 1 of 3) 5' UTR (NM_008773, exon 1 of 3) 274 NM_001302347 18442 Mm.3000 NM_008773 ENSMUSG00000032860 P2ry2 P2U1|P2Y2 purinergic receptor P2Y, G-protein coupled 2 protein-coding common_peak2_33_12_1.10939113919536_4.25513528773877_1.73042999925837 chr14 99542197 99542414 + 1.73042999925837 NA Intergenic Intergenic 243614 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837-2 chr19 59337881 59338316 + 1.73042999925837 NA intron (NM_001033222, intron 1 of 4) intron (NM_001033222, intron 1 of 4) 7682 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-5 chr16 29729811 29730240 + 1.73042999925837 NA Intergenic Intergenic 150691 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-6 chr6 134088596 134089081 + 1.73042999925837 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 53138 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837-4 chr5 122770438 122770778 + 1.73042999925837 NA intron (NM_001199676, intron 1 of 16) intron (NM_001199676, intron 1 of 16) 8802 NM_001199676 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-2 chr12 85824611 85824986 + 1.73042999925837 NA promoter-TSS (NM_001081423) promoter-TSS (NM_001081423) 95 NM_001360451 58520 Mm.143795 NM_021446 ENSMUSG00000021252 Erg28 0610007P14Rik|1190004E09Rik|AU019315|C77855|ORF11 ergosterol biosynthesis 28 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-2 chr11 5260951 5261483 + 1.73042999925837 NA intron (NM_032396, intron 1 of 8) CpG 393 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837 chr11 62024759 62025332 + 1.73042999925837 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) -51979 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837 chr11 59694018 59694598 + 1.73042999925837 NA intron (NM_201245, intron 1 of 22) intron (NM_201245, intron 1 of 22) 31813 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_33_12_1.10939113919536_4.25513528773877_1.73042999925837-2 chr17 34591876 34592131 + 1.73042999925837 NA promoter-TSS (NM_017463) promoter-TSS (NM_017463) -468 NM_017463 18515 Mm.390957 NM_017463 ENSMUSG00000034673 Pbx2 AU043397|G17 pre B cell leukemia homeobox 2 protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-3 chr13 99344826 99345208 + 1.73042999925837 NA promoter-TSS (NM_026873) promoter-TSS (NM_026873) 231 NM_173757 218506 Mm.30208 NM_173757 ENSMUSG00000041632 Mrps27 2610028H14Rik mitochondrial ribosomal protein S27 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-7 chr3 95109514 95110158 + 1.73042999925837 NA Intergenic ID4_|SINE|ID -1206 NM_009336 21427 Mm.133919 NM_009336 ENSMUSG00000008958 Vps72 Tcfl1|YL-1 vacuolar protein sorting 72 protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-4 chr15 86189612 86189867 + 1.73042999925837 NA Intergenic Intergenic -3598 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-4 chr12 104065975 104066261 + 1.73042999925837 NA Intergenic Intergenic -11841 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837-3 chr4 134821204 134821865 + 1.73042999925837 NA intron (NM_001355499, intron 7 of 11) intron (NM_001355499, intron 7 of 11) 31811 NM_001355501 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-7 chr9 66989834 66990128 + 1.73042999925837 NA Intergenic Intergenic -14497 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-3 chr6 81965443 81965742 + 1.73042999925837 NA intron (NM_026490, intron 1 of 4) intron (NM_026490, intron 1 of 4) 357 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-5 chr5 31570324 31571024 + 1.73042999925837 NA intron (NR_102275, intron 2 of 2) intron (NR_102275, intron 2 of 2) 723 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-4 chr3 89436850 89437262 + 1.73042999925837 NA intron (NM_146131, intron 1 of 10) intron (NM_146131, intron 1 of 10) 352 NM_146131 229534 Mm.65906 NM_146131 ENSMUSG00000042613 Pbxip1 4732463H20Rik pre B cell leukemia transcription factor interacting protein 1 protein-coding unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837-7 chr9 41735566 41735972 + 1.73042999925837 NA Intergenic Intergenic 153843 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-5 chr6 88084576 88084941 + 1.73042999925837 NA exon (NM_133933, exon 1 of 10) exon (NM_133933, exon 1 of 10) 285 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-2 chr5 77370186 77370533 + 1.73042999925837 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 37686 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837-6 chr5 103776930 103777522 + 1.73042999925837 NA intron (NM_001080798, intron 1 of 19) (GA)n|Simple_repeat|Simple_repeat 22653 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-9 chr6 124930208 124930593 + 1.73042999925837 NA promoter-TSS (NM_001170341) promoter-TSS (NM_001170341) -988 NM_145385 30853 Mm.29737 NM_145385 ENSMUSG00000030120 Mlf2 AI256856|AU018944|C77284 myeloid leukemia factor 2 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-6 chr19 10046616 10046983 + 1.73042999925837 NA intron (NM_021890, intron 1 of 11) intron (NM_021890, intron 1 of 11) 5251 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837 chr1 143776626 143777025 + 1.73042999925837 NA promoter-TSS (NM_001159866) promoter-TSS (NM_001159866) 226 NM_013835 20822 Mm.40370 NM_013835 ENSMUSG00000018199 Trove2 1810007I17Rik|A530054J02Rik|AI646302|SS-A/Ro|Ssa|Ssa2 TROVE domain family, member 2 protein-coding common_peak2_14_28_-1.2203934703552_4.24778425994997_1.73042999925837 chr3 108257143 108257463 + 1.73042999925837 NA exon (NM_011967, exon 1 of 9) exon (NM_011967, exon 1 of 9) 377 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding common_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-2 chr12 31950938 31951346 + 1.73042999925837 NA promoter-TSS (NM_001361928) promoter-TSS (NM_001361928) -897 NM_001361928 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak2_13_28_-1.3192269217624_4.19836753424637_1.73042999925837-5 chr6 125193182 125193871 + 1.73042999925837 NA 3' UTR (NM_025595, exon 3 of 3) 3' UTR (NM_025595, exon 3 of 3) 1326 NM_025595 66493 Mm.138749 NM_025595 ENSMUSG00000030335 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 protein-coding common_peak1_14_28_-1.2203934703552_4.24778425994997_1.73042999925837 chr11 113032925 113033249 + 1.73042999925837 NA Intergenic Intergenic 168751 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak1_33_12_1.10939113919536_4.25513528773877_1.73042999925837-3 chr11 100962761 100963308 + 1.73042999925837 NA 3' UTR (NM_001359105, exon 2 of 2) 3' UTR (NM_001359105, exon 2 of 2) 7581 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding common_peak1_142_81_0.510066548643049_6.61258527893961_1.73029381882069 chr2 102900203 102901480 + 1.73029381882069 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 824 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_216_132_0.409771174052478_7.26016802252743_1.72915557877216 chr19 10182984 10184275 + 1.72915557877216 NA intron (NM_146094, intron 1 of 11) intron (NM_146094, intron 1 of 11) 741 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding common_peak2_96_50_0.639185212439583_5.99201794819129_1.72886723646024 chr3 93555236 93555883 + 1.72886723646024 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 442 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_60_79_-0.674772025584486_5.98454208209512_1.72886723646023 chr16 31599189 31599800 + 1.72886723646023 NA Intergenic Intergenic -18639 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_46_65_-0.770732816056399_5.65902771133025_1.72757011346395 chr13 51961193 51961676 + 1.72757011346395 NA Intergenic Intergenic 114759 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_78_39_0.695639571387914_5.66974788058132_1.72757011346395 chr9 50753395 50754407 + 1.72757011346395 NA intron (NM_009964, intron 1 of 2) intron (NM_009964, intron 1 of 2) 930 NM_009964 12955 Mm.178 NM_009964 ENSMUSG00000032060 Cryab Crya-2|Crya2|HspB5|P23 crystallin, alpha B protein-coding common_peak2_131_149_-0.475862665244611_6.99088735787358_1.72744577118385 chr2 30257875 30259797 + 1.72744577118385 NA intron (NM_177725, intron 3 of 3) intron (NM_177725, intron 3 of 3) -7367 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak1_49_21_0.902867243515011_4.9108652403948_1.72734829286054-3 chr3 37356762 37357377 + 1.72734829286054 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 8416 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak1_25_41_-0.966779248323648_4.90892779861694_1.72734829286054 chr8 126601446 126601846 + 1.72734829286054 NA Intergenic Intergenic -8210 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_49_21_0.902867243515011_4.9108652403948_1.72734829286054-2 chr18 35295615 35296398 + 1.72734829286054 NA intron (NM_001360814, intron 7 of 9) RLTR14|LTR|ERV1 -80982 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak2_25_41_-0.966779248323648_4.90892779861694_1.72734829286054 chr11 16789700 16790429 + 1.72734829286054 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 37861 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_49_21_0.902867243515011_4.9108652403948_1.72734829286054 chr14 52304918 52305476 + 1.72734829286054 NA promoter-TSS (NM_019721) promoter-TSS (NM_019721) -73 NM_019721 56335 Mm.271759 NM_019721 ENSMUSG00000022160 Mettl3 2310024F18Rik|M6A|Spo8 methyltransferase like 3 protein-coding common_peak2_25_41_-0.966779248323648_4.90892779861694_1.72734829286054-2 chr14 21500810 21501199 + 1.72734829286054 NA intron (NM_017479, intron 1 of 16) CpG 1219 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak2_24_41_-1.02296358105321_4.88083563225216_1.72734829286054 chr9 105077588 105078204 + 1.72734829286054 NA TTS (NM_053159) TTS (NM_053159) 24628 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_49_21_0.902867243515011_4.9108652403948_1.72734829286054-3 chr17 87848473 87848971 + 1.72734829286054 NA Intergenic Intergenic -50728 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak1_49_21_0.902867243515011_4.9108652403948_1.72734829286054-2 chr2 90904360 90904648 + 1.72734829286054 NA promoter-TSS (NM_001311116) promoter-TSS (NM_001311116) 217 NM_026688 68349 Mm.30113 NM_026688 ENSMUSG00000005510 Ndufs3 0610010M09Rik|CI-30kD NADH dehydrogenase (ubiquinone) Fe-S protein 3 protein-coding common_peak2_49_21_0.902867243515011_4.9108652403948_1.72734829286054-2 chr17 45433937 45434429 + 1.72734829286054 NA promoter-TSS (NM_152810) promoter-TSS (NM_152810) 352 NR_130961 105246278 Mm.206588 NR_130960 ENSMUSG00000097119 B230354K17Rik - RIKEN cDNA B230354K17 gene ncRNA common_peak2_49_21_0.902867243515011_4.9108652403948_1.72734829286054 chr12 85486183 85486614 + 1.72734829286054 NA Intergenic Intergenic 12508 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_49_21_0.902867243515011_4.9108652403948_1.72734829286054 chr1 131690902 131691474 + 1.72734829286054 NA intron (NM_145509, intron 1 of 5) intron (NM_145509, intron 1 of 5) 2493 NM_145509 226421 Mm.44508 NM_145509 ENSMUSG00000052688 Rab7b 5430435G22Rik RAB7B, member RAS oncogene family protein-coding common_peak2_25_41_-0.966779248323648_4.90892779861694_1.72734829286054-3 chr4 124714882 124715285 + 1.72734829286054 NA intron (NM_029157, intron 1 of 16) CpG 222 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding common_peak1_208_126_0.422559146579002_7.19996426006167_1.72656755787615 chr3 16183232 16184122 + 1.72656755787615 NA intron (NM_001358043, intron 1 of 4) CpG 512 NM_172677 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding common_peak2_121_67_0.552638248479293_6.36378196548999_1.72640037085777 chr2 163644297 163645133 + 1.72640037085777 NA promoter-TSS (NR_028113) promoter-TSS (NR_028113) -135 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA common_peak1_121_67_0.552638248479293_6.36378196548999_1.72640037085777 chr10 24594276 24595230 + 1.72640037085777 NA promoter-TSS (NM_010217) promoter-TSS (NM_010217) -689 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_203_216_-0.384994732027062_7.56905386643095_1.7262365702823 chr5 140418354 140420091 + 1.7262365702823 NA promoter-TSS (NM_133916) promoter-TSS (NM_133916) -83 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak1_139_156_-0.457374715492311_7.06593339114547_1.72550289766615 chr18 60500781 60502097 + 1.72550289766615 NA 5' UTR (NM_134133, exon 1 of 2) 5' UTR (NM_134133, exon 1 of 2) 544 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak2_191_114_0.444220656781143_7.06760037933495_1.72550289766615 chr7 128523718 128524763 + 1.72550289766615 NA intron (NM_013863, intron 1 of 3) CpG 657 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak1_166_97_0.475162527911336_6.85229110807088_1.72523914848459 chr1 74035320 74037289 + 1.72523914848459 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 88143 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_291_296_-0.324013644381328_8.0523122986101_1.7221197512435 chr11 54059566 54063752 + 1.7221197512435 NA intron (NM_019417, intron 2 of 6) intron (NM_019417, intron 2 of 6) 7358 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding common_peak1_276_174_0.363548731483586_7.63298547757412_1.72044866280884 chr19 28622069 28624361 + 1.72044866280884 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -55009 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_218_133_0.412106867762365_7.27214262433895_1.71990631942123 chr4 105363349 105365796 + 1.71990631942123 NA Intergenic Intergenic 207225 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-17 chr4 137755030 137755419 + 1.71830443967823 NA intron (NM_001287172, intron 3 of 11) intron (NM_001287172, intron 3 of 11) 11251 NM_001287172 11647 Mm.288186 NM_007431 ENSMUSG00000028766 Alpl ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-25 chr7 143063182 143063476 + 1.71830443967823 NA intron (NM_133655, intron 2 of 7) intron (NM_133655, intron 2 of 7) -6039 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-12 chr5 100603867 100604196 + 1.71830443967823 NA Intergenic RLTR20C1_MM|LTR|ERVK -31826 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-9 chr18 60739727 60740075 + 1.71830443967823 NA intron (NM_001348146, intron 1 of 6) B1_Mur2|SINE|Alu -6760 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-24 chr7 143042653 143043074 + 1.71830443967823 NA intron (NR_110355, intron 2 of 4) intron (NR_110355, intron 2 of 4) -9887 NM_133655 12520 Mm.806 NM_133655 ENSMUSG00000037706 Cd81 Tapa-1|Tapa1|Tspan28 CD81 antigen protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-8 chr2 60634092 60634410 + 1.71830443967823 NA intron (NM_021359, intron 8 of 14) intron (NM_021359, intron 8 of 14) 39442 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-4 chr11 4704768 4705050 + 1.71830443967823 NA promoter-TSS (NM_197979) promoter-TSS (NM_197979) 253 NM_001356390 67178 Mm.271056 NM_026015 ENSMUSG00000009076 Zmat5 2610510L01Rik|D11Bwg0572e|D11Bwg1548e zinc finger, matrin type 5 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-11 chr2 113455342 113455807 + 1.71830443967823 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 14510 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-5 chr13 70773408 70773912 + 1.71830443967823 NA intron (NM_172053, intron 11 of 22) intron (NM_172053, intron 11 of 22) 68151 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-9 chr7 96136732 96137049 + 1.71830443967823 NA Intergenic Intergenic -34354 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-10 chr3 16178552 16178890 + 1.71830443967823 NA Intergenic Intergenic -4444 NM_001358043 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-6 chr17 7344060 7344720 + 1.71830443967823 NA intron (NR_046291, intron 11 of 11) intron (NR_046291, intron 11 of 11) 8306 NM_001098267 100216474 Mm.477432 NM_001098267 ENSMUSG00000079722 Ttll2 EG625850 tubulin tyrosine ligase-like family, member 2 protein-coding common_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-2 chr7 74525154 74525392 + 1.71830443967823 NA intron (NM_001038643, intron 1 of 10) intron (NM_001038643, intron 1 of 10) 29507 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-19 chr5 137063431 137063771 + 1.71830443967823 NA intron (NM_008871, intron 7 of 8) intron (NM_008871, intron 7 of 8) 8671 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-14 chr8 69850494 69851030 + 1.71830443967823 NA intron (NR_151670, intron 1 of 3) MER74B|LTR|ERVL 18138 NR_151669 80720 Mm.210823 NM_001024954 ENSMUSG00000031860 Pbx4 2410015M21Rik|AI429113|AW045266 pre B cell leukemia homeobox 4 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-15 chr4 33261141 33261439 + 1.71830443967823 NA Intergenic Intergenic -12503 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-6 chr14 34310069 34310339 + 1.71830443967823 NA promoter-TSS (NM_008133) promoter-TSS (NM_008133) 313 NR_153399 75698 Mm.45406 NM_029389 ENSMUSG00000041471 Fam35a 3110001K24Rik family with sequence similarity 35, member A protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-6 chr14 118712939 118713421 + 1.71830443967823 NA Intergenic Intergenic -6961 NM_001033336 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-15 chr8 105700643 105700901 + 1.71830443967823 NA promoter-TSS (NM_001286345) promoter-TSS (NM_001286345) -376 NM_001047436 56513 Mm.472753 NM_019695 ENSMUSG00000005699 Pard6a 0710008C04Rik|2610010A15Rik|PAR-6A|PAR6alpha|Par-6|Par6|Par6c|TAX40|Tip-40 par-6 family cell polarity regulator alpha protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-3 chr11 80152664 80153104 + 1.71830443967823 NA Intergenic Intergenic -1278 NM_172133 216991 Mm.341520 NM_172133 ENSMUSG00000020709 Adap2 Centa2 ArfGAP with dual PH domains 2 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-18 chr5 90612073 90612453 + 1.71830443967823 NA intron (NM_001310656, intron 4 of 10) intron (NM_001310656, intron 4 of 10) 28264 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-22 chr7 27197469 27197835 + 1.71830443967823 NA intron (NM_001290513, intron 2 of 7) intron (NM_001290513, intron 2 of 7) -1381 NM_001285825 53607 Mm.386890 NM_015782 ENSMUSG00000061479 Snrpa C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-28 chr9 63973015 63973458 + 1.71830443967823 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 48823 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_8_20_-1.48649621495957_3.64906931529898_1.71830443967823 chr5 32134610 32134835 + 1.71830443967823 NA Intergenic (TTTA)n|Simple_repeat|Simple_repeat -1750 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-10 chr7 98815050 98815309 + 1.71830443967823 NA Intergenic CpG -19933 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-23 chr7 126272012 126272312 + 1.71830443967823 NA promoter-TSS (NM_145587) promoter-TSS (NM_145587) -334 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-7 chr17 86145398 86145666 + 1.71830443967823 NA promoter-TSS (NM_030133) promoter-TSS (NM_030133) -357 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-16 chr9 6549244 6549583 + 1.71830443967823 NA Intergenic Intergenic -282866 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-5 chr13 34061542 34062039 + 1.71830443967823 NA intron (NM_026512, intron 5 of 6) intron (NM_026512, intron 5 of 6) 16218 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-4 chr11 113730298 113730585 + 1.71830443967823 NA intron (NM_001163346, intron 1 of 1) intron (NM_001163346, intron 1 of 1) -20424 NM_029794 52670 Mm.229207 NM_026682 ENSMUSG00000018727 Cpsf4l 0610010C04Rik|1500000C01Rik|D11Ertd636e cleavage and polyadenylation specific factor 4-like protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-8 chr2 117458774 117459005 + 1.71830443967823 NA Intergenic Intergenic -116012 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-20 chr6 5441256 5441830 + 1.71830443967823 NA Intergenic Intergenic 51133 NM_001355662 65255 Mm.51340 NM_023048 ENSMUSG00000042607 Asb4 8430401O13Rik|AV117194|AW060255 ankyrin repeat and SOCS box-containing 4 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-13 chr3 89328202 89328651 + 1.71830443967823 NA Intergenic PB1D9|SINE|Alu -5547 NM_010108 13638 Mm.331159 NM_010108 ENSMUSG00000028039 Efna3 AW494418|EFL-2|Ehk1-L|Epl3|LERK-3 ephrin A3 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-4 chr13 32515363 32515774 + 1.71830443967823 NA Intergenic Intergenic -177024 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-12 chr3 84428588 84428961 + 1.71830443967823 NA Intergenic Intergenic -48853 NR_040752 75309 Mm.159497 NR_040752 ENSMUSG00000104004 4930565D16Rik - RIKEN cDNA 4930565D16 gene ncRNA unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-5 chr12 52950296 52950588 + 1.71830443967823 NA intron (NM_198111, intron 7 of 13) intron (NM_198111, intron 7 of 13) 251059 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-12 chr8 64636631 64636961 + 1.71830443967823 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 56313 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-26 chr8 23236872 23237226 + 1.71830443967823 NA exon (NM_024240, exon 2 of 8) exon (NM_024240, exon 2 of 8) 619 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-8 chr16 84680572 84680871 + 1.71830443967823 NA intron (NR_040537, intron 1 of 2) intron (NR_040537, intron 1 of 2) 932 NR_040537 78023 Mm.243853 NR_040537 4930529L06Rik - RIKEN cDNA 4930529L06 gene ncRNA unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-13 chr7 16365192 16365457 + 1.71830443967823 NA intron (NM_019748, intron 5 of 8) intron (NM_019748, intron 5 of 8) 22572 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823 chr1 12835291 12835814 + 1.71830443967823 NA intron (NM_172294, intron 12 of 21) intron (NM_172294, intron 12 of 21) 117007 NM_172294 240725 Mm.45563 NM_172294 ENSMUSG00000016918 Sulf1 AI467640|AW121680|mKIAA1077 sulfatase 1 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-2 chr10 12705484 12705930 + 1.71830443967823 NA intron (NM_011682, intron 22 of 73) intron (NM_011682, intron 22 of 73) 156028 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-11 chr8 10905184 10905459 + 1.71830443967823 NA Intergenic Intergenic 5399 NR_102285 71624 Mm.139075 NR_102285 ENSMUSG00000109089 4833411C07Rik - RIKEN cDNA 4833411C07 gene ncRNA unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-2 chr10 128526322 128526573 + 1.71830443967823 NA promoter-TSS (NM_011843) promoter-TSS (NM_011843) -588 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-7 chr15 85982016 85982238 + 1.71830443967823 NA intron (NM_009886, intron 1 of 34) intron (NM_009886, intron 1 of 34) 51650 NM_009886 12614 Mm.22680 NM_009886 ENSMUSG00000016028 Celsr1 Adgrc1|Crsh|Scy|crash cadherin, EGF LAG seven-pass G-type receptor 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-16 chr4 100287176 100287610 + 1.71830443967823 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) -191474 NM_001033773 381534 Mm.318133 NM_001033773 ENSMUSG00000069733 Ube2u - ubiquitin-conjugating enzyme E2U (putative) protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-3 chr10 60284817 60285267 + 1.71830443967823 NA intron (NM_001146124, intron 1 of 13) intron (NM_001146124, intron 1 of 13) 581 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-9 chr2 125702571 125702947 + 1.71830443967823 NA intron (NM_199022, intron 1 of 11) intron (NM_199022, intron 1 of 11) 21389 NM_199022 271849 Mm.425101 NM_199022 ENSMUSG00000035109 Shc4 6230417E10Rik|9930029B02Rik|Gm685|RaLP SHC (Src homology 2 domain containing) family, member 4 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-21 chr6 91674872 91675301 + 1.71830443967823 NA Intergenic Intergenic -8981 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-27 chr9 32592251 32592610 + 1.71830443967823 NA Intergenic Intergenic -50978 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823 chr1 186447842 186448090 + 1.71830443967823 NA Intergenic Intergenic 110715 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-10 chr2 6333842 6334165 + 1.71830443967823 NA intron (NM_001080548, intron 1 of 14) intron (NM_001080548, intron 1 of 14) 11246 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823 chr1 194837358 194837634 + 1.71830443967823 NA Intergenic Intergenic 15495 NR_039539 100628615 NR_039539 ENSMUSG00000092633 Mir3962 mmu-mir-3962|mu-mir-3962 microRNA 3962 ncRNA unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-2 chr10 14195423 14195928 + 1.71830443967823 NA Intergenic Intergenic 229296 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823 chr5 151333038 151333323 + 1.71830443967823 NA Intergenic Intergenic -35495 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-11 chr3 96839270 96839477 + 1.71830443967823 NA intron (NM_001146001, intron 1 of 8) intron (NM_001146001, intron 1 of 8) 6699 NM_001146001 59020 Mm.489677 NM_021517 ENSMUSG00000038298 Pdzk1 1700023D20Rik|2610507N21Rik|4921513F16Rik|AI267131|AI314638|AL022680|D3Ertd537e|NHERF-3|Pdzd1|mPDZK1|naPi-Cap1 PDZ domain containing 1 protein-coding unique_peak2_7_20_-1.65522239898772_3.5647062232849_1.71830443967823-7 chr17 78400327 78400706 + 1.71830443967823 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 17636 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_8_20_-1.48649621495957_3.64906931529898_1.71830443967823-3 chr11 33840592 33841021 + 1.71830443967823 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) 2779 NM_027398 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_23_7_1.31087564644525_3.65543782322262_1.71830443967823-14 chr3 123386165 123386435 + 1.71830443967823 NA promoter-TSS (NM_201638) promoter-TSS (NM_201638) -310 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak2_76_95_-0.604128048549967_6.28289847644617_1.71814668979047 chr13 86046095 86046818 + 1.71814668979047 NA intron (NM_007749, intron 1 of 2) CpG 339 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak1_105_124_-0.527069208965471_6.70224968017935_1.71722495088778 chr11 78188185 78189301 + 1.71722495088778 NA promoter-TSS (NM_033475) promoter-TSS (NM_033475) -5 NM_033475 19376 Mm.275864 NM_033475 ENSMUSG00000002059 Rab34 AI326479|Narr|Rah|Rah1 RAB34, member RAS oncogene family protein-coding common_peak1_73_36_0.714452395855248_5.56667956355657_1.71609131452354-2 chr19 4231909 4232211 + 1.71609131452354 NA promoter-TSS (NR_132280) promoter-TSS (NR_132280) 167 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak1_73_36_0.714452395855248_5.56667956355657_1.71609131452354-4 chr6 125160118 125161224 + 1.71609131452354 NA non-coding (NR_126495, exon 9 of 9) non-coding (NR_126495, exon 9 of 9) 5102 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak1_73_36_0.714452395855248_5.56667956355657_1.71609131452354-3 chr6 54817258 54817929 + 1.71609131452354 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 677 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_73_36_0.714452395855248_5.56667956355657_1.71609131452354 chr16 10982135 10982603 + 1.71609131452354 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 10752 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_43_61_-0.775020907789814_5.56668585649197_1.71609131452352-2 chr4 126967809 126968261 + 1.71609131452352 NA promoter-TSS (NM_001357201) promoter-TSS (NM_001357201) -112 NM_001114399 67785 Mm.165401 NM_001114399 ENSMUSG00000042446 Zmym4 6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425 zinc finger, MYM-type 4 protein-coding unique_peak2_43_61_-0.775020907789814_5.56668585649197_1.71609131452352 chr11 43998014 43999363 + 1.71609131452352 NA Intergenic Intergenic -97451 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_43_61_-0.775020907789814_5.56668585649197_1.71609131452352-3 chr9 23134544 23135478 + 1.71609131452352 NA Intergenic Intergenic -88065 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak2_43_61_-0.775020907789814_5.56668585649197_1.71609131452352 chr11 101552911 101553610 + 1.71609131452352 NA intron (NM_008676, intron 1 of 23) intron (NM_008676, intron 1 of 23) 606 NM_001252223 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak1_43_61_-0.775020907789814_5.56668585649197_1.71609131452352 chr9 88481765 88482174 + 1.71609131452352 NA intron (NM_001284328, intron 1 of 11) CpG 428 NM_001311113 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak2_99_118_-0.53957388072888_6.6250308229435_1.71584275325157 chr9 6643319 6644696 + 1.71584275325157 NA Intergenic Intergenic -377460 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_51_70_-0.731263924622813_5.78411515719328_1.71556178298764-2 chr2 73891755 73892537 + 1.71556178298764 NA intron (NM_001025093, intron 1 of 14) CpG 493 NM_001284371 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak2_51_70_-0.731263924622813_5.78411515719328_1.71556178298764-3 chr8 120226551 120227442 + 1.71556178298764 NA intron (NR_110496, intron 1 of 2) intron (NR_110496, intron 1 of 2) 1234 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_51_70_-0.731263924622813_5.78411515719328_1.71556178298764 chr5 118154926 118155380 + 1.71556178298764 NA exon (NM_172721, exon 1 of 11) exon (NM_172721, exon 1 of 11) 305 NM_172721 231672 Mm.221769 NM_172721 ENSMUSG00000032867 Fbxw8 4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29 F-box and WD-40 domain protein 8 protein-coding common_peak2_51_70_-0.731263924622813_5.78411515719328_1.71556178298764 chr18 24121368 24122191 + 1.71556178298764 NA promoter-TSS (NM_172625) promoter-TSS (NM_172625) 40 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding common_peak2_84_43_0.663001157879789_5.79093219757719_1.71556178298763 chr3 95231890 95232748 + 1.71556178298763 NA intron (NM_001038708, intron 2 of 4) intron (NM_001038708, intron 2 of 4) 3376 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak1_85_43_0.679755931998892_5.79930958463674_1.71556178298763 chr11 70191195 70192627 + 1.71556178298763 NA Intergenic L1MEd|LINE|L1 -21999 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_85_43_0.679755931998892_5.79930958463674_1.71556178298763-2 chr4 132308715 132309496 + 1.71556178298763 NA promoter-TSS (NR_029412) promoter-TSS (NR_029412) -360 NR_029412 100310813 Mm.482271 NR_029412 ENSMUSG00000065097 Snora16a - small nucleolar RNA, H/ACA box 16A snoRNA common_peak1_354_230_0.318418639898066_8.01095836136509_1.7141909602805 chr11 100394607 100397747 + 1.7141909602805 NA intron (NM_010593, intron 1 of 13) intron (NM_010593, intron 1 of 13) 1613 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak1_214_226_-0.374759017474092_7.63916897855387_1.71333060364147 chr5 31696820 31699030 + 1.71333060364147 NA promoter-TSS (NM_181282) promoter-TSS (NM_181282) -125 NM_181281 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Babam2 6030405P19Rik|AI429776|B830038C02Rik|Bre BRISC and BRCA1 A complex member 2 protein-coding common_peak2_232_243_-0.363772903008559_7.74885088605861_1.71326766258806 chr19 9075284 9078989 + 1.71326766258806 NA TTS (NM_001286518) TTS (NM_001286518) 10820 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_71_90_-0.623138371099236_6.19622545464908_1.71183989259411 chr2 60879015 60880529 + 1.71183989259411 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 1666 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_435_424_-0.266734105043106_8.59795197850351_1.71179921548716 chr2 151910453 151914271 + 1.71179921548716 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 1155 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_28_45_-0.941593955106502_5.05276497850376_1.71114535657706-3 chr6 83456450 83457217 + 1.71114535657706 NA promoter-TSS (NM_001347313) promoter-TSS (NM_001347313) -441 NM_001347313 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding common_peak2_28_45_-0.941593955106502_5.05276497850376_1.71114535657706-2 chr6 72956675 72957220 + 1.71114535657706 NA TTS (NM_001039392) TTS (NM_001039392) 1285 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak2_28_45_-0.941593955106502_5.05276497850376_1.71114535657706 chr5 91987495 91988027 + 1.71114535657706 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 288 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding unique_peak1_54_24_0.854976111576215_5.07134424556283_1.71114535657705 chr15 95810328 95810893 + 1.71114535657705 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 19462 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak1_54_24_0.854976111576215_5.07134424556283_1.71114535657705 chr3 21955167 21955976 + 1.71114535657705 NA Intergenic Intergenic -121081 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_54_24_0.854976111576215_5.07134424556283_1.71114535657705-2 chr8 61270957 61271917 + 1.71114535657705 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) 17435 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak2_54_24_0.854976111576215_5.07134424556283_1.71114535657705 chr8 105544003 105544364 + 1.71114535657705 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 21881 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak1_54_24_0.854976111576215_5.07134424556283_1.71114535657705-3 chr8 71579548 71580183 + 1.71114535657705 NA intron (NM_001357180, intron 3 of 12) intron (NM_001357180, intron 3 of 12) 9271 NM_001357182 26457 Mm.38165 NM_011977 ENSMUSG00000031808 Slc27a1 FATP1|Fatp solute carrier family 27 (fatty acid transporter), member 1 protein-coding common_peak2_56_75_-0.697928456670984_5.89896328510809_1.70898420170664 chr12 99335730 99336703 + 1.70898420170664 NA intron (NM_183186, intron 3 of 5) RSINE1|SINE|B4 113858 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_90_47_0.635179743734843_5.90255237258858_1.70898420170664 chr11 51688852 51689902 + 1.70898420170664 NA promoter-TSS (NM_025319) promoter-TSS (NM_025319) -743 NM_025319 66050 Mm.35693 NM_025319 ENSMUSG00000007777 0610009B22Rik - RIKEN cDNA 0610009B22 gene protein-coding common_peak2_66_85_-0.64471173706171_6.10390888617124_1.70786100156634-2 chr6 135000038 135001343 + 1.70786100156634 NA Intergenic Intergenic -10922 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak2_66_85_-0.64471173706171_6.10390888617124_1.70786100156634 chr6 40470890 40472039 + 1.70786100156634 NA promoter-TSS (NM_001286664) promoter-TSS (NM_001286664) -4 NM_001286664 381760 Mm.276356 NM_028358 ENSMUSG00000029911 Ssbp1 2810480P10Rik|G630031O20Rik|MtSSB|mtDBP single-stranded DNA binding protein 1 protein-coding unique_peak1_69_33_0.75683817172222_5.46588192711145_1.70773054518537 chr11 113101057 113101768 + 1.70773054518537 NA intron (NR_015556, intron 1 of 2) intron (NR_015556, intron 1 of 2) 100426 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_68_33_0.73622606277337_5.45557587263702_1.70773054518537 chr11 121652225 121652875 + 1.70773054518537 NA intron (NM_178664, intron 3 of 12) intron (NM_178664, intron 3 of 12) 20601 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak1_69_33_0.75683817172222_5.46588192711145_1.70773054518537 chr11 98809843 98810497 + 1.70773054518537 NA promoter-TSS (NR_033551) promoter-TSS (NR_033551) -81 NR_033551 100037262 Mm.442062 NR_033551 ENSMUSG00000075576 Gm12359 - predicted gene 12359 ncRNA common_peak1_39_57_-0.815339031729142_5.450311479263_1.70773054518537 chr17 65613704 65614021 + 1.70773054518537 NA promoter-TSS (NM_013933) promoter-TSS (NM_013933) -307 NM_013933 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak1_68_33_0.73622606277337_5.45557587263702_1.70773054518537-3 chr7 141339563 141340563 + 1.70773054518537 NA intron (NM_133191, intron 1 of 20) intron (NM_133191, intron 1 of 20) 1061 NM_133191 98845 Mm.27451 NM_133191 ENSMUSG00000025504 Eps8l2 AI042819|AW545405|Eps8r2 EPS8-like 2 protein-coding common_peak1_69_33_0.75683817172222_5.46588192711145_1.70773054518537-2 chr3 15214416 15215373 + 1.70773054518537 NA Intergenic Intergenic 117408 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_68_33_0.73622606277337_5.45557587263702_1.70773054518537-2 chr2 117999238 118000506 + 1.70773054518537 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 111330 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak1_69_33_0.75683817172222_5.46588192711145_1.70773054518537-3 chr7 98543435 98544058 + 1.70773054518537 NA Intergenic Intergenic 49524 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_113_131_-0.501450042159097_6.7936690982789_1.70764686396438 chr11 104549651 104550536 + 1.70764686396438 NA promoter-TSS (NM_010858) promoter-TSS (NM_010858) 527 NM_001285990 217232 Mm.89845 NM_145436 ENSMUSG00000020687 Cdc27 AI452358|APC3|BC023187 cell division cycle 27 protein-coding common_peak2_113_131_-0.501450042159097_6.7936690982789_1.70764686396438 chr6 84009395 84010646 + 1.70764686396438 NA intron (NM_001077694, intron 1 of 54) intron (NM_001077694, intron 1 of 54) 1422 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak1_159_93_0.473943152574305_6.79156042796479_1.70764686396436 chr15 99771144 99772785 + 1.70764686396436 NA intron (NM_028015, intron 1 of 9) CpG 551 NM_028015 71949 Mm.390821 NM_028015 ENSMUSG00000023021 Cers5 2310081H14Rik|AU045339|AW544927|Lass5|Trh4 ceramide synthase 5 protein-coding common_peak1_61_80_-0.669400463331843_6.0051497712187_1.70669763709067 chr16 31274584 31275149 + 1.70669763709067 NA exon (NM_025800, exon 1 of 6) exon (NM_025800, exon 1 of 6) 411 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding common_peak1_97_51_0.625863445651719_6.01337144096695_1.70669763709065-2 chr4 139191608 139192516 + 1.70669763709065 NA promoter-TSS (NM_009798) promoter-TSS (NM_009798) -837 NM_009798 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_97_51_0.625863445651719_6.01337144096695_1.70669763709065 chr17 5492625 5493514 + 1.70669763709065 NA 5' UTR (NM_146073, exon 1 of 9) 5' UTR (NM_146073, exon 1 of 9) 469 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak1_254_262_-0.342705590121006_7.8675661942318_1.7048345640524 chr8 54560978 54563382 + 1.7048345640524 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 11849 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_88_107_-0.566580275763541_6.4715973642817_1.70401129769616 chr18 75405131 75405766 + 1.70401129769616 NA Intergenic Intergenic 38083 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_59_27_0.816122643568281_5.21541624384174_1.70390620647625 chr5 108132036 108132392 + 1.70390620647625 NA promoter-TSS (NM_028481) promoter-TSS (NM_028481) 406 NM_001347383 73130 Mm.363960 NM_028876 ENSMUSG00000063406 Tmed5 3110020O18Rik|4432412D15Rik|p24gamma2 transmembrane p24 trafficking protein 5 protein-coding unique_peak1_59_27_0.816122643568281_5.21541624384174_1.70390620647625 chr12 80291305 80292067 + 1.70390620647625 NA Intergenic Intergenic -31305 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_32_49_-0.876790205376966_5.20546108708624_1.70390620647625 chr17 35969352 35969716 + 1.70390620647625 NA intron (NM_013854, intron 1 of 22) CpG 216 NM_013854 224742 Mm.329022 NM_013854 ENSMUSG00000038762 Abcf1 AU041969|Abc50|D17Wsu166e|GCN20 ATP-binding cassette, sub-family F (GCN20), member 1 protein-coding common_peak1_59_27_0.816122643568281_5.21541624384174_1.70390620647625 chr11 59348941 59349632 + 1.70390620647625 NA Intergenic Intergenic 26367 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak1_59_27_0.816122643568281_5.21541624384174_1.70390620647625-2 chr19 45363889 45364574 + 1.70390620647625 NA intron (NM_009771, intron 1 of 13) intron (NM_009771, intron 1 of 13) 497 NM_001360126 12234 Mm.119717 NM_009771 ENSMUSG00000025217 Btrc Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|SCF b-TRCP|Slimb|b-TrCP|beta-TrCP beta-transducin repeat containing protein protein-coding common_peak1_59_27_0.816122643568281_5.21541624384174_1.70390620647625-4 chr7 110780877 110781575 + 1.70390620647625 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 8622 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_59_27_0.816122643568281_5.21541624384174_1.70390620647625-2 chr15 102983313 102984072 + 1.70390620647625 NA intron (NM_008272, intron 2 of 2) intron (NM_008272, intron 2 of 2) -2629 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA common_peak1_59_27_0.816122643568281_5.21541624384174_1.70390620647625-3 chr16 57230728 57231368 + 1.70390620647625 NA intron (NM_026254, intron 1 of 17) intron (NM_026254, intron 1 of 17) 418 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak2_107_125_-0.511788052173002_6.72138589741342_1.7037903148628 chr18 37643458 37644745 + 1.7037903148628 NA 5' UTR (NM_175770, exon 1 of 2) 5' UTR (NM_175770, exon 1 of 2) 103 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak2_63_30_0.761733774684433_5.33506319772909_1.70329669899196 chr11 5740690 5741122 + 1.70329669899196 NA intron (NM_001361588, intron 1 of 6) CpG 270 NM_001361590 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak1_64_30_0.783943783248873_5.34616820201131_1.70329669899196 chr3 151117687 151118565 + 1.70329669899196 NA Intergenic Intergenic -94264 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA common_peak2_35_53_-0.863176253490764_5.32329937541809_1.70329669899196 chr16 55634964 55635726 + 1.70329669899196 NA Intergenic Intergenic 140614 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196-3 chr16 17721534 17722273 + 1.70329669899196 NA intron (NM_001285886, intron 1 of 16) intron (NM_001285886, intron 1 of 16) 997 NM_001285886 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak2_35_53_-0.863176253490764_5.32329937541809_1.70329669899196-3 chr3 89227656 89228532 + 1.70329669899196 NA promoter-TSS (NM_013605) promoter-TSS (NM_013605) -896 NR_030579 100124470 NR_030579 ENSMUSG00000076255 Mir92b Mirn92b|mir-92b|mmu-mir-92b microRNA 92b ncRNA common_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196-2 chr11 48825994 48826618 + 1.70329669899196 NA intron (NM_053166, intron 1 of 6) intron (NM_053166, intron 1 of 6) 168 NM_053166 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding unique_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196 chr16 18342988 18343856 + 1.70329669899196 NA intron (NM_001359110, intron 1 of 9) intron (NM_001359110, intron 1 of 9) 488 NM_001359109 27883 Mm.265990 NM_138583 ENSMUSG00000013539 Tango2 D16H22S680E|T10 transport and golgi organization 2 protein-coding common_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196-5 chr3 117867346 117868289 + 1.70329669899196 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 1119 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding common_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196-4 chr2 24467018 24468388 + 1.70329669899196 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 7896 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196 chr10 94381392 94381887 + 1.70329669899196 NA intron (NM_001359762, intron 1 of 4) intron (NM_001359762, intron 1 of 4) 69690 NM_001359762 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_35_53_-0.863176253490764_5.32329937541809_1.70329669899196-2 chr18 60526196 60526761 + 1.70329669899196 NA intron (NM_026302, intron 1 of 12) intron (NM_026302, intron 1 of 12) 324 NM_001357462 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding common_peak1_63_30_0.761733774684433_5.33506319772909_1.70329669899196-6 chr4 48540704 48541158 + 1.70329669899196 NA intron (NM_028137, intron 1 of 2) intron (NM_028137, intron 1 of 2) 432 NM_028137 66665 Mm.140749 NM_028137 ENSMUSG00000039693 Msantd3 2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3 Myb/SANT-like DNA-binding domain containing 3 protein-coding unique_peak2_22_38_-1.03549393749275_4.76765525011587_1.70296806472143 chr4 63233870 63234657 + 1.70296806472143 NA intron (NM_025685, intron 4 of 60) intron (NM_025685, intron 4 of 60) 18851 NM_025685 373864 Mm.194116 NM_025685 ENSMUSG00000045672 Col27a1 5730512J02Rik|AI449266 collagen, type XXVII, alpha 1 protein-coding common_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-3 chr14 47472679 47473192 + 1.70296806472143 NA intron (NM_030236, intron 1 of 1) CpG 374 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding unique_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-4 chr6 17977875 17978418 + 1.70296806472143 NA Intergenic Intergenic 52299 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding common_peak2_45_19_0.920925206908892_4.78239069834181_1.70296806472143 chr17 87225641 87226223 + 1.70296806472143 NA Intergenic Intergenic -30990 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak2_22_38_-1.03549393749275_4.76765525011587_1.70296806472143-2 chrX 169319806 169320412 + 1.70296806472143 NA promoter-TSS (NM_001361166) promoter-TSS (NM_001361166) 263 NM_001331050 15159 Mm.284033 NM_008222 ENSMUSG00000031352 Hccs - holocytochrome c synthetase protein-coding unique_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-3 chr5 23410065 23410595 + 1.70296806472143 NA Intergenic Intergenic 24023 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143 chr11 55428474 55428876 + 1.70296806472143 NA Intergenic Intergenic -8595 NM_001290817 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding unique_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-6 chrX 134585759 134586189 + 1.70296806472143 NA intron (NM_019865, intron 1 of 4) CpG 320 NM_019865 19982 Mm.286408 NM_019865 ENSMUSG00000079435 Rpl36a L44L|Rpl44 ribosomal protein L36A protein-coding common_peak1_22_38_-1.03549393749275_4.76765525011587_1.70296806472143 chr12 104864345 104864885 + 1.70296806472143 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 461 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-2 chr17 24671534 24672251 + 1.70296806472143 NA intron (NM_001348231, intron 1 of 11) B1_Mur4|SINE|Alu 2205 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding common_peak1_22_38_-1.03549393749275_4.76765525011587_1.70296806472143-2 chr2 25546416 25546663 + 1.70296806472143 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 401 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-2 chr11 114829940 114830486 + 1.70296806472143 NA Intergenic Intergenic -21319 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143-5 chr7 142375877 142376493 + 1.70296806472143 NA 3' UTR (NM_009983, exon 9 of 9) 3' UTR (NM_009983, exon 9 of 9) -2439 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak1_45_19_0.920925206908892_4.78239069834181_1.70296806472143 chr11 86621939 86622677 + 1.70296806472143 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -38150 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_189_203_-0.397714947818957_7.47356786806202_1.70275381763967 chr11 69394607 69396753 + 1.70275381763967 NA promoter-TSS (NM_030083) promoter-TSS (NM_030083) -111 NM_030083 78304 Mm.45683 NM_030083 ENSMUSG00000059278 Naa38 1500034E06Rik|Lsmd1 N(alpha)-acetyltransferase 38, NatC auxiliary subunit protein-coding common_peak2_100_119_-0.537392696351105_6.63819424743297_1.70168256449541 chr11 72794965 72796060 + 1.70168256449541 NA promoter-TSS (NM_001045536) promoter-TSS (NM_001045536) 327 NM_001024926 192986 Mm.194755 NM_001024926 ENSMUSG00000057778 Cyb5d2 9330151E16Rik|Gm2 cytochrome b5 domain containing 2 protein-coding common_peak2_120_138_-0.490630311747183_6.87362591684992_1.70097915216098 chr8 44995449 44997088 + 1.70097915216098 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 46060 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_116_64_0.557786586308324_6.30126110618262_1.70018878372039 chr11 60935600 60936350 + 1.70018878372039 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 3918 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_79_40_0.678034979207102_5.69656949422163_1.70008721686218 chr4 55732416 55734022 + 1.70008721686218 NA Intergenic Intergenic -200744 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak1_80_40_0.69583044850953_5.70546722887285_1.70008721686218-2 chr19 3810083 3810884 + 1.70008721686218 NA intron (NM_001167885, intron 12 of 12) intron (NM_001167885, intron 12 of 12) -41290 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_80_40_0.69583044850953_5.70546722887285_1.70008721686218 chr15 62079640 62080739 + 1.70008721686218 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 40932 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_80_40_0.69583044850953_5.70546722887285_1.70008721686218 chr2 57237638 57238385 + 1.70008721686218 NA promoter-TSS (NM_010274) promoter-TSS (NM_010274) 333 NM_001145820 14571 Mm.3711 NM_010274 ENSMUSG00000026827 Gpd2 AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38 glycerol phosphate dehydrogenase 2, mitochondrial protein-coding common_peak1_110_60_0.574004026148766_6.21773935063727_1.69288202389467 chr4 155216478 155217423 + 1.69288202389467 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 5585 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_72_91_-0.619146520491086_6.21398869581147_1.69288202389466-2 chr18 24838258 24839266 + 1.69288202389466 NA intron (NM_001289654, intron 3 of 24) intron (NM_001289654, intron 3 of 24) 130139 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_72_91_-0.619146520491086_6.21398869581147_1.69288202389466 chr17 35812368 35813342 + 1.69288202389466 NA Intergenic Intergenic -8858 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak1_72_91_-0.619146520491086_6.21398869581147_1.69288202389466 chr5 5341691 5343031 + 1.69288202389466 NA intron (NM_011074, intron 2 of 14) intron (NM_011074, intron 2 of 14) 37890 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak1_166_181_-0.417922268172152_7.29883350611262_1.69286608779087 chr7 141475285 141476640 + 1.69286608779087 NA promoter-TSS (NM_001252588) promoter-TSS (NM_001252588) -418 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak2_83_102_-0.581020810737082_6.39599012181468_1.69262915773265 chr8 56550413 56551480 + 1.69262915773265 NA promoter-TSS (NM_015791) promoter-TSS (NM_015791) -188 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak1_421_279_0.288548957640424_8.27355749576518_1.69127457787168 chr15 102998828 103002136 + 1.69127457787168 NA Intergenic Intergenic -9080 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding common_peak2_53_71_-0.697378150542153_5.82123592617124_1.69048838080306 chr13 38960109 38960924 + 1.69048838080306 NA promoter-TSS (NM_134060) promoter-TSS (NM_134060) 21 NM_001170430 108652 Mm.255506 NM_134060 ENSMUSG00000021432 Slc35b3 4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2 solute carrier family 35, member B3 protein-coding common_peak1_86_44_0.663895527275046_5.8238008599672_1.69048838080306 chr2 152815860 152816980 + 1.69048838080306 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 12069 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_86_44_0.663895527275046_5.8238008599672_1.69048838080306 chr9 107296749 107297543 + 1.69048838080306 NA intron (NM_001317354, intron 1 of 1) intron (NM_001317354, intron 1 of 1) 487 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_89_108_-0.563871156923587_6.48624874631513_1.68840944590783 chr2 122028619 122029427 + 1.68840944590783 NA intron (NM_001256055, intron 2 of 7) CpG-8471 440 NM_001256055 100042807 Mm.329403 NM_001256055 ENSMUSG00000043424 Eif3j2 Eif3j-2|Gm9781|eIF3 p35|eIF3j-B eukaryotic translation initiation factor 3, subunit J2 protein-coding common_peak2_67_86_-0.64016761808552_6.12285968680597_1.68774079684931 chr15 51991022 51991764 + 1.68774079684931 NA intron (NM_009009, intron 1 of 13) CpG 367 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak1_104_56_0.592246601035273_6.12901331468238_1.68774079684931 chr5 137306744 137307557 + 1.68774079684931 NA exon (NM_031405, exon 2 of 20) exon (NM_031405, exon 2 of 20) 524 NM_031405 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak2_44_62_-0.765911776073333_5.59432403546325_1.68686384061123 chr2 143903414 143904382 + 1.68686384061123 NA Intergenic Intergenic -11433 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak1_74_37_0.695206950936178_5.59553098891167_1.68686384061122-2 chr14 69284050 69284917 + 1.68686384061122 NA intron (NM_026331, intron 1 of 3) CpG 620 NM_026331 67712 Mm.293635 NM_026331 ENSMUSG00000034248 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mfrn|Mfrn1|Mscp|frascati|mitoferrin solute carrier family 25, member 37 protein-coding common_peak1_74_37_0.695206950936178_5.59553098891167_1.68686384061122 chr10 99244039 99245071 + 1.68686384061122 NA Intergenic Intergenic -18676 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_74_37_0.695206950936178_5.59553098891167_1.68686384061122-3 chr2 25176101 25177211 + 1.68686384061122 NA Intergenic Intergenic -4102 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding unique_peak1_75_37_0.714180961528317_5.60501799420774_1.68686384061122 chr1 177983401 177984070 + 1.68686384061122 NA Intergenic CpG -7663 NR_155538 545391 Mm.442974 NM_001034899 ENSMUSG00000091476 Gm16432 EG545391|EG666250 predicted gene 16432 protein-coding common_peak1_74_37_0.695206950936178_5.59553098891167_1.68686384061122-4 chr8 22763333 22764020 + 1.68686384061122 NA intron (NM_008872, intron 1 of 13) intron (NM_008872, intron 1 of 13) 5954 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding unique_peak1_74_37_0.695206950936178_5.59553098891167_1.68686384061122 chr11 118353449 118354678 + 1.68686384061122 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) 1348 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak1_74_37_0.695206950936178_5.59553098891167_1.68686384061122-2 chr15 5243466 5244158 + 1.68686384061122 NA 5' UTR (NM_008965, exon 1 of 3) 5' UTR (NM_008965, exon 1 of 3) 375 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_58_76_-0.667385455372221_5.93309381300879_1.6858729052488-2 chr17 55878587 55879341 + 1.6858729052488 NA promoter-TSS (NM_144546) promoter-TSS (NM_144546) -11 NM_144546 104349 Mm.460659 NM_144546 ENSMUSG00000057835 Zfp119a AL024077|Mzf13|Zfp119 zinc finger protein 119a protein-coding common_peak2_57_76_-0.691873519317634_5.92084978103608_1.6858729052488 chr4 150913926 150915138 + 1.6858729052488 NA Intergenic CpG -4611 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_58_76_-0.667385455372221_5.93309381300879_1.6858729052488 chr11 100938908 100939397 + 1.6858729052488 NA intron (NM_213660, intron 1 of 23) intron (NM_213660, intron 1 of 23) 388 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_58_76_-0.667385455372221_5.93309381300879_1.6858729052488 chr1 71936091 71936722 + 1.6858729052488 NA Intergenic Intergenic 48294 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_58_76_-0.667385455372221_5.93309381300879_1.6858729052488-2 chr8 70635493 70636027 + 1.6858729052488 NA Intergenic Intergenic -3304 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak2_58_76_-0.667385455372221_5.93309381300879_1.6858729052488-3 chr5 3501909 3502621 + 1.6858729052488 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -41568 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_92_48_0.636575297665028_5.93299749294772_1.6858729052488 chr2 34870111 34870868 + 1.6858729052488 NA intron (NM_080554, intron 1 of 9) intron (NM_080554, intron 1 of 9) 473 NM_001355544 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_98_52_0.61292615248877_6.03438353080758_1.68521156853126 chr4 107452177 107452949 + 1.68521156853126 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 17844 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak1_195_118_0.424430420911622_7.10703297376375_1.68418961209629 chr13 40728022 40730273 + 1.68418961209629 NA intron (NM_001301674, intron 2 of 7) intron (NM_001301674, intron 2 of 7) 1310 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak2_187_112_0.439372381740379_7.03986515328538_1.68402970751782 chr15 75940531 75941969 + 1.68402970751782 NA intron (NM_030199, intron 1 of 1) CpG 298 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding common_peak1_293_187_0.345494934769382_7.72733631906233_1.68279767969195 chr3 135689960 135691926 + 1.68279767969195 NA intron (NM_008689, intron 1 of 24) CpG 604 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_78_97_-0.597142177839932_6.31613875519524_1.68268334293409 chr12 87387141 87388221 + 1.68268334293409 NA intron (NM_011479, intron 1 of 11) intron (NM_011479, intron 1 of 11) 674 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding common_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-6 chr14 75284405 75284694 + 1.68242911687175 NA TTS (NM_019775) TTS (NM_019775) 176 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding unique_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-5 chr9 105010529 105011218 + 1.68242911687175 NA intron (NM_028719, intron 11 of 15) intron (NM_028719, intron 11 of 15) -42395 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_20_35_-1.05033532584969_4.64475733851747_1.68242911687175-2 chr18 32448100 32448579 + 1.68242911687175 NA Intergenic Intergenic -70055 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-5 chr13 98534769 98535300 + 1.68242911687175 NA Intergenic Intergenic -99969 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA unique_peak2_19_35_-1.12022805847064_4.60981097220699_1.68242911687175-2 chr6 47672472 47672760 + 1.68242911687175 NA promoter-TSS (NR_002841).5 promoter-TSS (NR_002841).5 -217 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA unique_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175 chr17 64439257 64439696 + 1.68242911687175 NA Intergenic Intergenic -1330 NR_105848 102465228 NR_105848 ENSMUSG00000098984 Mir6420 Gm28007|mmu-mir-6420 microRNA 6420 ncRNA unique_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-3 chr6 43257131 43257623 + 1.68242911687175 NA Intergenic Intergenic -8267 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175 chr1 9798184 9798687 + 1.68242911687175 NA intron (NM_177547, intron 1 of 16) CpG 305 NM_177547 170755 Mm.336410 NM_133220 ENSMUSG00000025915 Sgk3 2510015P22Rik|A330005P07Rik|Cisk|fy|fz serum/glucocorticoid regulated kinase 3 protein-coding common_peak1_19_35_-1.12022805847064_4.60981097220699_1.68242911687175 chr10 19150369 19150781 + 1.68242911687175 NA intron (NR_038021, intron 1 of 3) (TCTA)n|Simple_repeat|Simple_repeat 8826 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_19_35_-1.12022805847064_4.60981097220699_1.68242911687175 chr6 3398747 3399487 + 1.68242911687175 NA intron (NM_010156, intron 1 of 1) intron (NM_010156, intron 1 of 1) 454 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-2 chr11 49247125 49247548 + 1.68242911687175 NA promoter-TSS (NM_001110149) promoter-TSS (NM_001110149) -141 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_20_35_-1.05033532584969_4.64475733851747_1.68242911687175 chr13 55635022 55635350 + 1.68242911687175 NA exon (NM_001282055, exon 1 of 23) exon (NM_001282055, exon 1 of 23) 187 NM_001282055 212880 Mm.202725 NM_145975 ENSMUSG00000021500 Ddx46 2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding common_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-4 chr6 92092417 92093056 + 1.68242911687175 NA 5' UTR (NM_001347342, exon 1 of 15) 5' UTR (NM_001347342, exon 1 of 15) 303 NM_001347342 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding unique_peak2_19_35_-1.12022805847064_4.60981097220699_1.68242911687175-3 chr7 82192288 82193058 + 1.68242911687175 NA intron (NM_001277954, intron 1 of 8) intron (NM_001277954, intron 1 of 8) 17877 NM_001277954 20408 Mm.736 NM_017400 ENSMUSG00000030638 Sh3gl3 EEN-B2|SH3P13|Sh3d2c|Sh3d2c2 SH3-domain GRB2-like 3 protein-coding unique_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175 chr19 34704493 34705040 + 1.68242911687175 NA intron (NM_172838, intron 1 of 6) intron (NM_172838, intron 1 of 6) 42345 NM_172838 240638 Mm.74636 NM_172838 ENSMUSG00000009378 Slc16a12 3230401A21|AW210596 solute carrier family 16 (monocarboxylic acid transporters), member 12 protein-coding common_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-5 chr7 28419015 28419249 + 1.68242911687175 NA intron (NM_175021, intron 2 of 12) intron (NM_175021, intron 2 of 12) 17059 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-4 chr12 8327114 8327740 + 1.68242911687175 NA intron (NM_021429, intron 4 of 6) intron (NM_021429, intron 4 of 6) 13994 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-2 chr5 92854510 92855065 + 1.68242911687175 NA intron (NM_001077595, intron 1 of 9) ID_B1|SINE|B4 -43206 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_41_17_0.942609694577068_4.64122984873085_1.68242911687175 chr3 107822858 107823093 + 1.68242911687175 NA Intergenic Intergenic -54255 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-2 chr2 33215209 33215768 + 1.68242911687175 NA promoter-TSS (NM_011923) promoter-TSS (NM_011923) -473 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-2 chr4 106678347 106678836 + 1.68242911687175 NA promoter-TSS (NM_001172073) promoter-TSS (NM_001172073) 95 NM_001172073 72354 Mm.25806 NM_028209 ENSMUSG00000025413 Ttc4 2810002P21Rik|AF007005|L62 tetratricopeptide repeat domain 4 protein-coding common_peak2_19_35_-1.12022805847064_4.60981097220699_1.68242911687175 chr5 96802577 96802860 + 1.68242911687175 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 9333 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-6 chr7 66178456 66179035 + 1.68242911687175 NA Intergenic B1_Mur3|SINE|Alu 69230 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-3 chr11 74565965 74566406 + 1.68242911687175 NA intron (NM_001015046, intron 2 of 24) ID4|SINE|ID 23973 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_41_17_0.942609694577068_4.64122984873085_1.68242911687175-3 chr5 115118947 115119434 + 1.68242911687175 NA intron (NM_007383, intron 1 of 9) CpG 156 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding common_peak2_20_35_-1.05033532584969_4.64475733851747_1.68242911687175-3 chr8 31115160 31115819 + 1.68242911687175 NA intron (NM_175136, intron 1 of 5) intron (NM_175136, intron 1 of 5) 3643 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding unique_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-4 chr9 74975417 74976263 + 1.68242911687175 NA promoter-TSS (NM_153584) promoter-TSS (NM_153584) -271 NM_153584 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175 chr19 38015932 38016203 + 1.68242911687175 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 27510 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_42_17_0.97631752876712_4.65808376582587_1.68242911687175-3 chr2 145167381 145167965 + 1.68242911687175 NA promoter-TSS (NM_001356497) promoter-TSS (NM_001356497) -102 NM_001356497 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-14 chr11 31149285 31149483 + 1.68134727924692 NA Intergenic Intergenic -163019 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-21 chr3 34220314 34220585 + 1.68134727924692 NA Intergenic Intergenic -139095 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-67 chr7 25719369 25719637 + 1.68134727924692 NA promoter-TSS (NM_028771) promoter-TSS (NM_028771) -450 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-62 chr4 132344559 132344797 + 1.68134727924692 NA intron (NM_133878, intron 1 of 9) intron (NM_133878, intron 1 of 9) 1072 NM_001197082 100088 Mm.255045 NM_133878 ENSMUSG00000028896 Rcc1 4931417M11Rik|AI326872|Chc1 regulator of chromosome condensation 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-77 chr8 79992415 79992646 + 1.68134727924692 NA exon (NM_020259, exon 8 of 13) exon (NM_020259, exon 8 of 13) 65478 NM_020259 15245 Mm.254493 NM_020259 ENSMUSG00000064325 Hhip Hhip1 Hedgehog-interacting protein protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-52 chr3 89245549 89245736 + 1.68134727924692 NA promoter-TSS (NM_025327) promoter-TSS (NM_025327) 255 NM_183037 360213 Mm.331156 NM_183037 ENSMUSG00000042766 Trim46 TRIFIC tripartite motif-containing 46 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-11 chr10 89747356 89747613 + 1.68134727924692 NA intron (NM_029166, intron 1 of 20) intron (NM_029166, intron 1 of 20) 2493 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-30 chr13 112327912 112328136 + 1.68134727924692 NA intron (NM_001168403, intron 5 of 11) intron (NM_001168403, intron 5 of 11) 39506 NM_001168404 77318 Mm.159895 NM_029898 ENSMUSG00000049985 Ankrd55 C030011J08Rik ankyrin repeat domain 55 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-6 chr1 193416244 193416493 + 1.68134727924692 NA Intergenic Intergenic -46086 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-17 chr11 50237287 50237489 + 1.68134727924692 NA exon (NM_008521, exon 2 of 5) exon (NM_008521, exon 2 of 5) 1144 NM_001313968 17001 Mm.245151 NM_008521 ENSMUSG00000020377 Ltc4s - leukotriene C4 synthase protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-53 chr3 97933147 97933404 + 1.68134727924692 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 3102 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-2 chr1 162205853 162206064 + 1.68134727924692 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -11665 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-10 chr13 97743686 97743900 + 1.68134727924692 NA TTS (NR_152141) TTS (NR_152141) 3618 NR_152140 403201 Mm.110162 NR_152140 5330416C01Rik Gm532 RIKEN cDNA 5330416C01 gene ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-21 chr11 75621300 75621515 + 1.68134727924692 NA intron (NM_008850, intron 10 of 11) intron (NM_008850, intron 10 of 11) -9613 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-29 chr6 86885930 86886156 + 1.68134727924692 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 36526 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-3 chr4 125115723 125115913 + 1.68134727924692 NA Intergenic Intergenic 12063 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-3 chr1 133294793 133295010 + 1.68134727924692 NA intron (NM_182930, intron 25 of 26) intron (NM_182930, intron 25 of 26) -14922 NM_026680 68338 Mm.247935 NM_026680 ENSMUSG00000103421 Golt1a 0610012C01Rik|Kiss1|metastatin golgi transport 1A protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-45 chr2 6396982 6397337 + 1.68134727924692 NA intron (NM_181399, intron 3 of 13) intron (NM_181399, intron 3 of 13) 44423 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-84 chrX 19171121 19171386 + 1.68134727924692 NA Intergenic Intergenic -24282 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-58 chr4 56850659 56850894 + 1.68134727924692 NA intron (NM_018761, intron 1 of 18) intron (NM_018761, intron 1 of 18) 14435 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-85 chrX 96077982 96078262 + 1.68134727924692 NA Intergenic Intergenic -17923 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-13 chr15 25378344 25378573 + 1.68134727924692 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 35306 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-38 chr17 29093328 29093520 + 1.68134727924692 NA promoter-TSS (NM_007669) promoter-TSS (NM_007669) -345 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-15 chr16 43575369 43575583 + 1.68134727924692 NA intron (NM_001285805, intron 7 of 10) intron (NM_001285805, intron 7 of 10) -65179 NR_030576 100124467 NR_030576 ENSMUSG00000076372 Mir568 Mirn568|mmu-mir-568 microRNA 568 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-74 chr8 31823016 31823210 + 1.68134727924692 NA intron (NM_178591, intron 6 of 8) intron (NM_178591, intron 6 of 8) 95090 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-24 chr11 113064703 113064929 + 1.68134727924692 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 137022 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-24 chr3 121727995 121728322 + 1.68134727924692 NA intron (NM_010171, intron 2 of 5) intron (NM_010171, intron 2 of 5) 4621 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-81 chr9 35119204 35119409 + 1.68134727924692 NA intron (NR_029475, intron 2 of 5) intron (NR_029475, intron 2 of 5) -2442 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 SIAT4-C|ST3Gal IV|ST3GalIV|Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-39 chr17 30178176 30178397 + 1.68134727924692 NA intron (NM_001356265, intron 4 of 5) intron (NM_001356265, intron 4 of 5) 173247 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-7 chr10 18078411 18078674 + 1.68134727924692 NA intron (NM_009048, intron 1 of 19) intron (NM_009048, intron 1 of 19) 22602 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-18 chr18 82974245 82974500 + 1.68134727924692 NA intron (NM_183033, intron 2 of 5) intron (NM_183033, intron 2 of 5) -53812 NR_033307 75853 Mm.420737 NR_033307 4930592I03Rik - RIKEN cDNA 4930592I03 gene ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-55 chr3 101163486 101163715 + 1.68134727924692 NA Intergenic Intergenic -53434 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-37 chr16 86766394 86766644 + 1.68134727924692 NA Intergenic Intergenic 39994 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-4 chr1 158714579 158714931 + 1.68134727924692 NA 3' UTR (NM_001085376, exon 22 of 22) 3' UTR (NM_001085376, exon 22 of 22) 209130 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-48 chr2 129817384 129817584 + 1.68134727924692 NA intron (NM_183262, intron 3 of 3) intron (NM_183262, intron 3 of 3) -16025 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-60 chr4 107801782 107801993 + 1.68134727924692 NA promoter-TSS (NR_033496) promoter-TSS (NR_033496) -372 NR_033496 16975 Mm.442134 NM_053073 ENSMUSG00000028613 Lrp8 4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding common_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-2 chr3 83863399 83863593 + 1.68134727924692 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -21888 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-65 chr6 146913930 146914147 + 1.68134727924692 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 25544 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-79 chr8 86848883 86849081 + 1.68134727924692 NA intron (NM_030563, intron 4 of 6) intron (NM_030563, intron 4 of 6) 36276 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-5 chr12 52829925 52830199 + 1.68134727924692 NA intron (NM_198111, intron 2 of 13) intron (NM_198111, intron 2 of 13) 130679 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-16 chr11 43997533 43997841 + 1.68134727924692 NA Intergenic MER5A1|DNA|hAT-Charlie -96450 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-82 chr9 41512187 41512435 + 1.68134727924692 NA intron (NR_131930, intron 2 of 3) MIRc|SINE|MIR -19114 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-8 chr10 39371244 39371446 + 1.68134727924692 NA intron (NM_001122893, intron 1 of 13) intron (NM_001122893, intron 1 of 13) 1546 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-49 chr3 8964080 8964368 + 1.68134727924692 NA promoter-TSS (NM_001025261) promoter-TSS (NM_001025261) -78 NM_001025261 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-64 chr6 113053163 113053388 + 1.68134727924692 NA intron (NM_008188, intron 3 of 9) intron (NM_008188, intron 3 of 9) 6973 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-8 chr13 21809952 21810216 + 1.68134727924692 NA promoter-TSS (NM_001177544) promoter-TSS (NM_001177544) 115 NM_001313878 665622 Mm.471247 NM_001110555 ENSMUSG00000069303 Hist1h2br Gm11277 histone cluster 1 H2br protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-31 chr14 21032499 21032704 + 1.68134727924692 NA 3' UTR (NM_009502, exon 21 of 21) 3' UTR (NM_009502, exon 21 of 21) 19841 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-71 chr7 131361563 131361844 + 1.68134727924692 NA intron (NR_152380, intron 2 of 5) intron (NR_152380, intron 2 of 5) 1023 NM_026655 68277 Mm.121122 NM_026655 ENSMUSG00000040177 2310057M21Rik 3110040E10Rik|AI429544 RIKEN cDNA 2310057M21 gene protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-47 chr2 126352357 126352574 + 1.68134727924692 NA intron (NM_001359975, intron 23 of 27) intron (NM_001359975, intron 23 of 27) 139088 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-25 chr4 139215719 139215933 + 1.68134727924692 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 21715 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-19 chr11 59311825 59312039 + 1.68134727924692 NA intron (NM_139298, intron 1 of 3) intron (NM_139298, intron 1 of 3) 5002 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-42 chr19 11616701 11616957 + 1.68134727924692 NA 3' UTR (NM_001276330, exon 7 of 7) 3' UTR (NM_001276330, exon 7 of 7) 6890 NM_001276330 14126 Mm.329735 NM_013516 ENSMUSG00000024680 Ms4a2 FcRB|Fce1b|Fcer1b|Fcrbeta|Ms4a1|fcERI membrane-spanning 4-domains, subfamily A, member 2 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-29 chr13 40640032 40640305 + 1.68134727924692 NA Intergenic Intergenic -87640 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-11 chr14 32089821 32090068 + 1.68134727924692 NA intron (NM_145460, intron 1 of 7) intron (NM_145460, intron 1 of 7) 4216 NM_145460 218885 Mm.202257 NM_145460 ENSMUSG00000021906 Oxnad1 2410002F01Rik|AW492292|BC019806 oxidoreductase NAD-binding domain containing 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-15 chr11 31850315 31850524 + 1.68134727924692 NA Intergenic Intergenic -20521 NM_001290676 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-22 chr3 38255523 38255730 + 1.68134727924692 NA Intergenic Intergenic -47507 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-61 chr4 126058990 126059265 + 1.68134727924692 NA intron (NM_172701, intron 1 of 9) intron (NM_172701, intron 1 of 9) 562 NM_172701 230751 Mm.38907 NM_172701 ENSMUSG00000042616 Oscp1 1810007P19Rik|5730415O04|6030436A01Rik organic solute carrier partner 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-18 chr11 51059196 51059399 + 1.68134727924692 NA promoter-TSS (NM_001347495) promoter-TSS (NM_001347495) 40 NM_001347495 21408 Mm.4792 NM_009329 ENSMUSG00000020364 Zfp354a AW488485|Tcf17|Znf354a|kid1 zinc finger protein 354A protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-22 chr11 88485249 88485440 + 1.68134727924692 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) 132571 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692 chr1 23382886 23383130 + 1.68134727924692 NA exon (NM_001081079, exon 1 of 7) exon (NM_001081079, exon 1 of 7) 167 NM_001081079 70155 Mm.28013 NM_001081079 ENSMUSG00000026158 Ogfrl1 2210417C17Rik opioid growth factor receptor-like 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-70 chr7 96136380 96136580 + 1.68134727924692 NA Intergenic Intergenic -34764 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-46 chr2 71626644 71626880 + 1.68134727924692 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -80008 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692 chr2 72235405 72235603 + 1.68134727924692 NA intron (NM_001355478, intron 21 of 26) intron (NM_001355478, intron 21 of 26) -50133 NM_023057 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-28 chr12 102251638 102251866 + 1.68134727924692 NA intron (NM_172152, intron 12 of 16) intron (NM_172152, intron 12 of 16) -31322 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-72 chr8 14651190 14651412 + 1.68134727924692 NA intron (NM_172910, intron 4 of 15) intron (NM_172910, intron 4 of 15) -237235 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-28 chr5 125105281 125105520 + 1.68134727924692 NA intron (NM_011424, intron 6 of 46) intron (NM_011424, intron 6 of 46) 73814 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-14 chr15 75049513 75049775 + 1.68134727924692 NA promoter-TSS (NM_001252057) promoter-TSS (NM_001252057) -807 NM_001252056 17067 Mm.1583 NM_010741 ENSMUSG00000079018 Ly6c1 AA682074|AA959465|Ly-6C|Ly-6C1|Ly6c lymphocyte antigen 6 complex, locus C1 protein-coding common_peak1_4_11_-1.52115559860299_2.82438470141966_1.68134727924692 chr3 9500100 9500374 + 1.68134727924692 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 97159 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-16 chr16 73484453 73484654 + 1.68134727924692 NA Intergenic Intergenic 821404 NM_019413 19876 Mm.310772 NM_019413 ENSMUSG00000022883 Robo1 AW494633|AW742721|DUTT1|Gm310 roundabout guidance receptor 1 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-34 chr9 65019613 65019861 + 1.68134727924692 NA intron (NM_021345, intron 1 of 10) intron (NM_021345, intron 1 of 10) 1980 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-35 chr15 85540076 85540285 + 1.68134727924692 NA intron (NM_009528, intron 3 of 3) intron (NM_009528, intron 3 of 3) -36953 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-73 chr8 25612339 25612651 + 1.68134727924692 NA intron (NM_001001735, intron 1 of 9) intron (NM_001001735, intron 1 of 9) 10211 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-20 chr2 145299839 145300085 + 1.68134727924692 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 57351 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-41 chr18 80538289 80538478 + 1.68134727924692 NA Intergenic Intergenic 6163 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-10 chr10 88380100 88380330 + 1.68134727924692 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 803 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-19 chr19 36347788 36348008 + 1.68134727924692 NA Intergenic Intergenic -31169 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-20 chr11 60300520 60300781 + 1.68134727924692 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 52255 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-68 chr7 74342607 74342850 + 1.68134727924692 NA intron (NM_001038643, intron 4 of 10) intron (NM_001038643, intron 4 of 10) 212052 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-13 chr11 8458891 8459105 + 1.68134727924692 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 205537 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-40 chr18 46523507 46523698 + 1.68134727924692 NA intron (NM_173423, intron 2 of 2) intron (NM_173423, intron 2 of 2) 2369 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-78 chr8 82262539 82262756 + 1.68134727924692 NA Intergenic Intergenic 139939 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-27 chr5 114653670 114653890 + 1.68134727924692 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 4641 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-7 chr12 99260079 99260331 + 1.68134727924692 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -97397 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-30 chr7 19309374 19309632 + 1.68134727924692 NA 5' UTR (NM_008036, exon 1 of 4) 5' UTR (NM_008036, exon 1 of 4) 542 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-59 chr4 58464803 58465016 + 1.68134727924692 NA intron (NM_172989, intron 3 of 3) intron (NM_172989, intron 3 of 3) -23811 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-63 chr6 91075504 91075704 + 1.68134727924692 NA intron (NM_018815, intron 8 of 39) intron (NM_018815, intron 8 of 39) 41222 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-44 chr19 41939941 41940183 + 1.68134727924692 NA intron (NM_001360676, intron 8 of 11) intron (NM_001360676, intron 8 of 11) 6617 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-2 chr1 81756379 81756632 + 1.68134727924692 NA Intergenic Intergenic -375411 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-54 chr3 100225236 100225591 + 1.68134727924692 NA Intergenic Intergenic 62950 NR_104341 14547 Mm.279228 NM_010269 ENSMUSG00000027865 Gdap2 C77050|D3Ertd801e ganglioside-induced differentiation-associated-protein 2 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-34 chr15 62291120 62291314 + 1.68134727924692 NA Intergenic Intergenic -71766 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-31 chr7 80535524 80535743 + 1.68134727924692 NA promoter-TSS (NM_007550) promoter-TSS (NM_007550) -514 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ like helicase protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-9 chr10 78321051 78321312 + 1.68134727924692 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 19026 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-50 chr3 65636432 65636639 + 1.68134727924692 NA Intergenic Intergenic -22753 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-9 chr13 47215359 47215642 + 1.68134727924692 NA intron (NM_146042, intron 2 of 7) intron (NM_146042, intron 2 of 7) 21497 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-32 chr14 76536265 76536459 + 1.68134727924692 NA intron (NM_001360048, intron 2 of 2) intron (NM_001360048, intron 2 of 2) -15507 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-6 chr12 53316892 53317098 + 1.68134727924692 NA intron (NM_013780, intron 1 of 11) intron (NM_013780, intron 1 of 11) 68318 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-86 chrX 150440674 150440989 + 1.68134727924692 NA promoter-TSS (NM_001164686) promoter-TSS (NM_001164686) -42 NR_152727 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-26 chr11 119855734 119856054 + 1.68134727924692 NA intron (NM_028898, intron 17 of 33) intron (NM_028898, intron 17 of 33) -21529 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-26 chr4 148559433 148559637 + 1.68134727924692 NA intron (NM_001355489, intron 1 of 24) intron (NM_001355489, intron 1 of 24) 822 NM_001355489 50912 Mm.266635 NM_016699 ENSMUSG00000017264 Exosc10 PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4 exosome component 10 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-33 chr15 25560900 25561114 + 1.68134727924692 NA Intergenic Intergenic -61543 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-32 chr8 105300292 105300542 + 1.68134727924692 NA exon (NM_148952, exon 6 of 10) exon (NM_148952, exon 6 of 10) 2754 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-12 chr14 43520118 43520383 + 1.68134727924692 NA Intergenic Intergenic 87763 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-51 chr3 85972102 85972300 + 1.68134727924692 NA Intergenic Intergenic 30290 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-23 chr11 88541471 88541674 + 1.68134727924692 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -77679 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-27 chr12 53588807 53589123 + 1.68134727924692 NA intron (NM_013780, intron 3 of 11) intron (NM_013780, intron 3 of 11) 340288 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-75 chr8 60992506 60992697 + 1.68134727924692 NA promoter-TSS (NM_001293637) promoter-TSS (NM_001293637) -592 NM_001293637 18004 Mm.486881 NM_175089 ENSMUSG00000031644 Nek1 D8Ertd790e|kat NIMA (never in mitosis gene a)-related expressed kinase 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-43 chr19 17346680 17346979 + 1.68134727924692 NA intron (NM_010265, intron 1 of 2) B1_Mur1|SINE|Alu -7324 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-23 chr3 81052776 81053045 + 1.68134727924692 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 16494 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-69 chr7 82069770 82070057 + 1.68134727924692 NA promoter-TSS (NR_045744) promoter-TSS (NR_045744) -474 NR_045744 434205 Mm.333986 NR_045744 ENSMUSG00000109145 Gm20744 - predicted gene, 20744 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692 chr1 11085147 11085378 + 1.68134727924692 NA intron (NM_029525, intron 5 of 39) intron (NM_029525, intron 5 of 39) 91797 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-17 chr17 56586139 56586391 + 1.68134727924692 NA intron (NM_001163300, intron 1 of 20) intron (NM_001163300, intron 1 of 20) 1283 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-56 chr3 107488198 107488419 + 1.68134727924692 NA intron (NM_172271, intron 6 of 11) intron (NM_172271, intron 6 of 11) 12432 NR_121629 229706 Mm.212867 NM_172271 ENSMUSG00000027894 Slc6a17 D130012J15Rik|Ntt4 solute carrier family 6 (neurotransmitter transporter), member 17 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-25 chr11 118010849 118011147 + 1.68134727924692 NA intron (NR_151726, intron 7 of 9) intron (NR_151726, intron 7 of 9) 8728 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-66 chr6 147117502 147117690 + 1.68134727924692 NA Intergenic Intergenic 26521 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-33 chr8 120037701 120037920 + 1.68134727924692 NA intron (NM_001310635, intron 13 of 14) intron (NM_001310635, intron 13 of 14) 45372 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-36 chr16 35769544 35769764 + 1.68134727924692 NA promoter-TSS (NM_175111) promoter-TSS (NM_175111) -298 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-80 chr8 127317540 127317832 + 1.68134727924692 NA intron (NM_001013580, intron 2 of 13) intron (NM_001013580, intron 2 of 13) 18034 NM_001013580 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-5 chr1 193344026 193344343 + 1.68134727924692 NA TTS (NM_001277928) TTS (NM_001277928) 26098 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-12 chr10 120577141 120577364 + 1.68134727924692 NA Intergenic Intergenic -100783 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-4 chr12 40334861 40335084 + 1.68134727924692 NA intron (NM_178845, intron 5 of 11) intron (NM_178845, intron 5 of 11) 110818 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-57 chr3 146473865 146474082 + 1.68134727924692 NA intron (NM_001316756, intron 10 of 14) intron (NM_001316756, intron 10 of 14) 23506 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-76 chr8 61195066 61195278 + 1.68134727924692 NA Intergenic Intergenic -28999 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding unique_peak1_12_4_1.110665059141_2.87726062445786_1.68134727924692-83 chr9 107576004 107576194 + 1.68134727924692 NA promoter-TSS (NM_001331161) promoter-TSS (NM_001331161) -828 NM_008317 15586 Mm.475658 NM_008317 ENSMUSG00000010051 Hyal1 Hya1|Hyal-1 hyaluronoglucosaminidase 1 protein-coding unique_peak2_4_11_-1.52115559860299_2.82438470141966_1.68134727924692-3 chr10 5288617 5288882 + 1.68134727924692 NA intron (NM_001347711, intron 55 of 145) intron (NM_001347711, intron 55 of 145) -94042 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|KASH1|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding unique_peak1_50_22_0.867104503506893_4.95711420781046_1.68120055799038 chr11 101225742 101226289 + 1.68120055799038 NA intron (NM_007970, intron 1 of 20) CpG 448 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding unique_peak1_50_22_0.867104503506893_4.95711420781046_1.68120055799038-2 chr17 21008973 21009541 + 1.68120055799038 NA intron (NM_145483, intron 1 of 4) CpG 316 NM_145483 224585 Mm.296036 NM_145483 ENSMUSG00000067942 Zfp160 6720480D16Rik|F11|HKr18|HZF5|KR18|mKIAA1611|mszf47 zinc finger protein 160 protein-coding common_peak1_50_22_0.867104503506893_4.95711420781046_1.68120055799038-2 chr14 57316928 57317308 + 1.68120055799038 NA intron (NM_030004, intron 3 of 7) intron (NM_030004, intron 3 of 7) 81365 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak2_26_42_-0.946662924228695_4.95293329258775_1.68120055799038-2 chr6 71439656 71440324 + 1.68120055799038 NA intron (NM_001355745, intron 1 of 9) CpG 647 NM_001355745 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding common_peak1_50_22_0.867104503506893_4.95711420781046_1.68120055799038 chr11 67527072 67527846 + 1.68120055799038 NA Intergenic Intergenic -5539 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_50_22_0.867104503506893_4.95711420781046_1.68120055799038-4 chr5 96998592 96999442 + 1.68120055799038 NA intron (NM_080708, intron 1 of 15) intron (NM_080708, intron 1 of 15) 1328 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak2_26_42_-0.946662924228695_4.95293329258775_1.68120055799038-2 chr2 154390568 154391037 + 1.68120055799038 NA intron (NM_009228, intron 2 of 7) intron (NM_009228, intron 2 of 7) 17282 NM_009228 20648 Mm.1541 NM_009228 ENSMUSG00000027488 Snta1 AW228934|Snt1 syntrophin, acidic 1 protein-coding common_peak1_26_42_-0.946662924228695_4.95293329258775_1.68120055799038 chr17 84072445 84072865 + 1.68120055799038 NA Intergenic Intergenic -6005 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak2_26_42_-0.946662924228695_4.95293329258775_1.68120055799038 chr4 95426670 95427252 + 1.68120055799038 NA Intergenic Intergenic -130546 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak2_26_42_-0.946662924228695_4.95293329258775_1.68120055799038-3 chr6 108663129 108663791 + 1.68120055799038 NA intron (NM_011498, intron 4 of 4) intron (NM_011498, intron 4 of 4) -2526 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_26_42_-0.946662924228695_4.95293329258775_1.68120055799038 chr10 17568472 17568898 + 1.68120055799038 NA Intergenic Intergenic -154543 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_50_22_0.867104503506893_4.95711420781046_1.68120055799038-3 chr17 13007937 13008595 + 1.68120055799038 NA exon (NM_013671, exon 2 of 5) exon (NM_013671, exon 2 of 5) 427 NM_013671 20656 Mm.290876 NM_013671 ENSMUSG00000006818 Sod2 MnSOD|Sod-2 superoxide dismutase 2, mitochondrial protein-coding common_peak1_171_101_0.459707229091449_6.90227895651722_1.67753543714036 chr18 39488367 39490522 + 1.67753543714036 NA Intergenic CpG -2199 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-17 chr8 33809781 33810149 + 1.67711336403294 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -62195 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294-3 chr2 69379406 69379786 + 1.67711336403294 NA promoter-TSS (NM_175512) promoter-TSS (NM_175512) -866 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294-2 chr12 35292408 35292679 + 1.67711336403294 NA Intergenic Intergenic -97646 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-5 chr14 20150511 20151041 + 1.67711336403294 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 31006 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-13 chr2 144441074 144441321 + 1.67711336403294 NA Intergenic Intergenic -18083 NR_033459 668917 Mm.152805 NR_033459 ENSMUSG00000083674 Zfp133-ps Zfp133 zinc finger protein 133, pseudogene pseudo unique_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294-2 chr13 59991473 59991869 + 1.67711336403294 NA Intergenic Intergenic -38040 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-8 chr15 53341138 53341336 + 1.67711336403294 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 4946 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-19 chr8 94678371 94678631 + 1.67711336403294 NA intron (NM_026385, intron 2 of 3) intron (NM_026385, intron 2 of 3) 11410 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-3 chr7 109637782 109638046 + 1.67711336403294 NA Intergenic Intergenic -20767 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-7 chr14 101833742 101834189 + 1.67711336403294 NA intron (NM_201529, intron 3 of 30) intron (NM_201529, intron 3 of 30) -6658 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-15 chr3 87163299 87163700 + 1.67711336403294 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 11248 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-11 chr2 28224713 28225173 + 1.67711336403294 NA intron (NM_001038613, intron 5 of 5) intron (NM_001038613, intron 5 of 5) 19254 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294 chr10 99240794 99241129 + 1.67711336403294 NA Intergenic Intergenic -22270 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-18 chr8 33816654 33817143 + 1.67711336403294 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -69128 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding common_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294 chr11 31561268 31561689 + 1.67711336403294 NA Intergenic Intergenic 110384 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-20 chr9 48407935 48408382 + 1.67711336403294 NA Intergenic Intergenic 46117 NM_172921 244853 Mm.325522 NM_172921 ENSMUSG00000044229 Nxpe4 C130036J11|D930028F11Rik|Fam55d neurexophilin and PC-esterase domain family, member 4 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-10 chr18 80552621 80552950 + 1.67711336403294 NA Intergenic Intergenic -8239 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-14 chr3 81038944 81039271 + 1.67711336403294 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 2691 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-9 chr17 46272773 46273238 + 1.67711336403294 NA intron (NM_028751, intron 2 of 10) PB1D11|SINE|Alu 10021 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-16 chr7 25788334 25788622 + 1.67711336403294 NA exon (NM_001190974, exon 1 of 19) exon (NM_001190974, exon 1 of 19) 255 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-12 chr2 127722149 127722407 + 1.67711336403294 NA intron (NM_145532, intron 1 of 3) intron (NM_145532, intron 1 of 3) 7619 NM_145532 228576 Mm.133036 NM_145532 ENSMUSG00000027377 Mall BC012256|BENE mal, T cell differentiation protein-like protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-4 chr12 72741074 72741651 + 1.67711336403294 NA Intergenic Intergenic -19849 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding unique_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294-6 chrX 14092105 14092572 + 1.67711336403294 NA Intergenic Intergenic -118810 NM_001034100 385328 Mm.275681 NM_001034100 ENSMUSG00000078346 H2al1n EG385328|Gm5382 H2A histone family member L1N protein-coding unique_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294 chr10 16553720 16554194 + 1.67711336403294 NA Intergenic Intergenic 541825 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294 chr10 81559652 81559938 + 1.67711336403294 NA intron (NM_001276288, intron 1 of 6) intron (NM_001276288, intron 1 of 6) 351 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-2 chr19 4222862 4223138 + 1.67711336403294 NA 3' UTR (NM_001310038, exon 4 of 4) 3' UTR (NM_001310038, exon 4 of 4) 8611 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-3 chr12 28675678 28676326 + 1.67711336403294 NA intron (NM_134052, intron 1 of 3) intron (NM_134052, intron 1 of 3) 795 NM_134052 104923 Mm.291504 NM_134052 ENSMUSG00000020629 Adi1 AL024210|Fe-ARD|MTCBP-1|Ni-ARD acireductone dioxygenase 1 protein-coding unique_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294-5 chr8 77133707 77134278 + 1.67711336403294 NA intron (NM_001083906, intron 3 of 8) intron (NM_001083906, intron 3 of 8) 231484 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-6 chr14 40947968 40948557 + 1.67711336403294 NA promoter-TSS (NM_001316748) promoter-TSS (NM_001316748) -53 NM_001316748 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding unique_peak1_27_9_1.20977099890456_3.92681359433964_1.67711336403294-2 chr11 5846654 5847109 + 1.67711336403294 NA Intergenic Intergenic -8865 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding unique_peak2_10_23_-1.39167713897761_3.88912393123235_1.67711336403294-4 chr3 87104193 87104730 + 1.67711336403294 NA intron (NM_001170985, intron 2 of 15) intron (NM_001170985, intron 2 of 15) 70286 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_70_34_0.735337724761765_5.49695187932585_1.67641628704619 chr15 74922812 74923730 + 1.67641628704619 NA Intergenic Intergenic -31780 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_70_34_0.735337724761765_5.49695187932585_1.67641628704619 chr14 59597186 59598318 + 1.67641628704619 NA intron (NR_153387, intron 1 of 10) CpG 207 NM_001168537 71891 Mm.439850 NM_027986 ENSMUSG00000021982 Cdadc1 2310010M10Rik|AI449174|AI463398|BB130816|NYD-SP15 cytidine and dCMP deaminase domain containing 1 protein-coding common_peak2_85_103_-0.561252167504903_6.41981363438864_1.67634034988185 chr13 28544839 28545505 + 1.67634034988185 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 165701 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_85_103_-0.561252167504903_6.41981363438864_1.67634034988185 chr2 174330161 174331263 + 1.67634034988185 NA intron (NM_201616, intron 1 of 11) CpG-8943 623 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak2_112_61_0.576126391273377_6.24225950602356_1.67443046860839 chr19 16325381 16326404 + 1.67443046860839 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -10888 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_73_92_-0.615253049623833_6.23153228629611_1.67443046860837 chr18 24838212 24839275 + 1.67443046860837 NA intron (NM_001289654, intron 3 of 24) intron (NM_001289654, intron 3 of 24) 130120 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_197_119_0.426901031870207_7.12034111154362_1.67423445259633 chr3 157533885 157534968 + 1.67423445259633 NA promoter-TSS (NR_152231) promoter-TSS (NR_152231) 261 NM_001355386 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding common_peak1_103_121_-0.519309122254263_6.67108277643575_1.67420020040381 chr10 80053675 80054831 + 1.67420020040381 NA exon (NM_001037741, exon 1 of 7) exon (NM_001037741, exon 1 of 7) 234 NM_001037741 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding common_peak1_188_113_0.434260906736304_7.05002046753289_1.67358717604713 chr11 5520670 5522099 + 1.67358717604713 NA intron (NM_013842, intron 1 of 4) CpG 743 NM_001271730 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak2_91_109_-0.545561391301649_6.50857901787383_1.67315279398724 chr7 79147723 79149071 + 1.67315279398724 NA intron (NM_001045489, intron 1 of 8) intron (NM_001045489, intron 1 of 8) 663 NM_001045489 17304 Mm.1451 NM_008594 ENSMUSG00000030605 Mfge8 AA408458|AI325141|MFG-E8|MP47|Mfgm|P47|SED1|lactadherin milk fat globule-EGF factor 8 protein protein-coding common_peak1_140_80_0.507591923071641_6.59364596442044_1.67258053447009 chr5 43232894 43234487 + 1.67258053447009 NA exon (NM_175937, exon 1 of 11) exon (NM_175937, exon 1 of 11) 227 NM_001177379 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding common_peak1_243_152_0.375658267463736_7.44521697642452_1.67174816735417 chr4 149997948 150000620 + 1.67174816735417 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 3952 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_55_25_0.824204396077588_5.11254191617989_1.67017740290565 chr5 24604439 24605477 + 1.67017740290565 NA Intergenic CpG -2956 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding unique_peak1_55_25_0.824204396077588_5.11254191617989_1.67017740290565-2 chr8 126536901 126537729 + 1.67017740290565 NA Intergenic Intergenic 56121 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_29_46_-0.924056306478509_5.09256069843838_1.67017740290565 chr3 95015043 95015550 + 1.67017740290565 NA promoter-TSS (NM_030074) promoter-TSS (NM_030074) -58 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak2_55_25_0.824204396077588_5.11254191617989_1.67017740290565 chr10 84700460 84701125 + 1.67017740290565 NA intron (NM_027423, intron 23 of 27) intron (NM_027423, intron 23 of 27) -55256 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding common_peak1_55_25_0.824204396077588_5.11254191617989_1.67017740290565 chr9 35025953 35026794 + 1.67017740290565 NA intron (NM_001190912, intron 12 of 15) intron (NM_001190912, intron 12 of 15) -90355 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_36_54_-0.850398972467218_5.35616022729105_1.66944648069026 chr1 182282133 182282622 + 1.66944648069026 NA promoter-TSS (NM_001360783) promoter-TSS (NM_001360783) -182 NM_001360783 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak2_36_54_-0.850398972467218_5.35616022729105_1.66944648069026 chr13 63232265 63233410 + 1.66944648069026 NA intron (NM_001289926, intron 11 of 15) intron (NM_001289926, intron 11 of 15) -7192 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_36_54_-0.850398972467218_5.35616022729105_1.66944648069026-2 chr2 148680702 148681536 + 1.66944648069026 NA promoter-TSS (NM_028986) promoter-TSS (NM_028986) -1 NM_001355689 74533 Mm.136913 NM_028986 ENSMUSG00000027439 Gzf1 8430437G08Rik|Zfp336|mGZF1 GDNF-inducible zinc finger protein 1 protein-coding common_peak2_37_54_-0.812196258979513_5.3752615840349_1.66944648069026 chr18 76241277 76241990 + 1.66944648069026 NA promoter-TSS (NM_010754) promoter-TSS (NM_010754) -68 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding unique_peak2_36_54_-0.850398972467218_5.35616022729105_1.66944648069026 chr7 45730344 45731805 + 1.66944648069026 NA intron (NM_001360784, intron 5 of 5) intron (NM_001360784, intron 5 of 5) -5258 NM_027055 69363 Mm.45607 NM_027055 ENSMUSG00000070563 Spaca4 1700008E09Rik|AV043694|Samp14 sperm acrosome associated 4 protein-coding common_peak1_65_31_0.760011004824515_5.38000550241226_1.66944648069025-4 chr9 108566393 108567249 + 1.66944648069025 NA intron (NM_023247, intron 1 of 4) CpG 521 NM_023247 66706 Mm.29471 NM_023247 ENSMUSG00000070283 Ndufaf3 4733401H18Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 protein-coding common_peak1_65_31_0.760011004824515_5.38000550241226_1.66944648069025 chr16 25058930 25059270 + 1.66944648069025 NA promoter-TSS (NR_040374) promoter-TSS (NR_040374) -539 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_65_31_0.760011004824515_5.38000550241226_1.66944648069025 chr2 38549091 38549943 + 1.66944648069025 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 37641 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_65_31_0.760011004824515_5.38000550241226_1.66944648069025 chr11 31556014 31556660 + 1.66944648069025 NA Intergenic Intergenic 115525 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_65_31_0.760011004824515_5.38000550241226_1.66944648069025-3 chr9 102784693 102785479 + 1.66944648069025 NA Intergenic Intergenic 45438 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_65_31_0.760011004824515_5.38000550241226_1.66944648069025-2 chr2 102945106 102945847 + 1.66944648069025 NA Intergenic Intergenic -43811 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_69_87_-0.615130605664739_6.15186631580493_1.66819226071313 chr2 117651825 117652568 + 1.66819226071313 NA Intergenic Intergenic 160606 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_68_87_-0.635742714613588_6.1415602613305_1.66819226071313 chr13 52977098 52978822 + 1.66819226071313 NA intron (NM_017373, intron 1 of 1) intron (NM_017373, intron 1 of 1) 3079 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_68_87_-0.635742714613588_6.1415602613305_1.66819226071313-2 chr13 95547831 95548657 + 1.66819226071313 NA Intergenic Intergenic -23004 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak2_69_87_-0.615130605664739_6.15186631580493_1.66819226071313 chr4 134767132 134767950 + 1.66819226071313 NA intron (NM_145554, intron 1 of 8) CpG 463 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_69_87_-0.615130605664739_6.15186631580493_1.66819226071313-2 chr9 70012067 70013224 + 1.66819226071313 NA promoter-TSS (NM_001039519) promoter-TSS (NM_001039519) 97 NR_104093 235459 Mm.293117 NM_199151 ENSMUSG00000033543 Gtf2a2 TFIIA-gamma|TfIIg|Tfiia2 general transcription factor II A, 2 protein-coding common_peak1_105_57_0.580734080569044_6.14834803541209_1.66819226071312 chr11 16801184 16802655 + 1.66819226071312 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 49716 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458 chr10 43634146 43634452 + 1.66700866096458 NA Intergenic Intergenic 40872 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA common_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458-3 chr4 11676415 11676942 + 1.66700866096458 NA Intergenic RLTR31D_MM|LTR|ERVK -27769 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458-6 chr9 77744480 77744827 + 1.66700866096458 NA Intergenic Intergenic -9882 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458-2 chr5 124248984 124249474 + 1.66700866096458 NA intron (NM_011256, intron 1 of 24) CpG 531 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding unique_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458 chr11 29173741 29174116 + 1.66700866096458 NA intron (NM_134034, intron 1 of 15) intron (NM_134034, intron 1 of 15) 1021 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding unique_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458-3 chr6 92199908 92200395 + 1.66700866096458 NA intron (NM_030081, intron 6 of 11) intron (NM_030081, intron 6 of 11) 14660 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding unique_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458-2 chr17 79340366 79340999 + 1.66700866096458 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 14409 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_38_15_1.00637377668257_4.50318688834128_1.66700866096458 chr2 181497315 181497525 + 1.66700866096458 NA intron (NR_111899, intron 1 of 5) CpG 278 NM_001291204 66314 Mm.136648 NM_025482 ENSMUSG00000000827 Tpd52l2 2810411G23Rik|AU016537|C86069|D54 tumor protein D52-like 2 protein-coding common_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458-5 chr8 94992515 94992930 + 1.66700866096458 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 8323 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458 chr14 55672478 55672867 + 1.66700866096458 NA promoter-TSS (NM_008683) promoter-TSS (NM_008683) 437 NM_177992 105446 Mm.390685 NM_177992 ENSMUSG00000002326 Gmpr2 1810008P16Rik|5730544D12Rik|AA959850|GMPR 2 guanosine monophosphate reductase 2 protein-coding common_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458-4 chr6 42354957 42355385 + 1.66700866096458 NA intron (NM_001289618, intron 4 of 9) intron (NM_001289618, intron 4 of 9) 5343 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458-3 chr5 137069163 137069600 + 1.66700866096458 NA exon (NM_008871, exon 3 of 9) exon (NM_008871, exon 3 of 9) 2891 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding unique_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458-4 chr8 11324563 11324897 + 1.66700866096458 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -11904 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_38_15_1.00637377668257_4.50318688834128_1.66700866096458-2 chr3 95673685 95674149 + 1.66700866096458 NA Intergenic Intergenic 14000 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458 chr11 72214792 72215466 + 1.66700866096458 NA promoter-TSS (NM_001163728) promoter-TSS (NM_001163728) -9 NM_001163728 75304 Mm.340776 NM_001163728 4930563E22Rik - RIKEN cDNA 4930563E22 gene protein-coding unique_peak2_17_32_-1.1456278911125_4.4715801738022_1.66700866096458-2 chr11 75348553 75348850 + 1.66700866096458 NA promoter-TSS (NM_001164223) promoter-TSS (NM_001164223) 268 NM_001102611 319822 Mm.340377 NM_177009 ENSMUSG00000018809 Smyd4 G430029E23Rik SET and MYND domain containing 4 protein-coding common_peak2_33_50_-0.862594484635044_5.24112809965397_1.66691574198013-2 chr4 117289018 117289486 + 1.66691574198013 NA exon (NM_001310730, exon 1 of 11) exon (NM_001310730, exon 1 of 11) 203 NM_001310730 66743 Mm.318331 NM_025739 ENSMUSG00000028677 Rnf220 4732477A13|4931406I20Rik|5730503K05Rik|AV302541 ring finger protein 220 protein-coding common_peak2_33_50_-0.862594484635044_5.24112809965397_1.66691574198013-3 chr4 150799108 150799634 + 1.66691574198013 NA Intergenic Intergenic -54425 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak2_33_50_-0.862594484635044_5.24112809965397_1.66691574198013 chr17 34961712 34962425 + 1.66691574198013 NA Intergenic Intergenic -2830 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding unique_peak1_60_28_0.789175074175304_5.25256853221522_1.66691574198012 chr10 19015533 19016282 + 1.66691574198012 NA promoter-TSS (NM_009397) promoter-TSS (NM_009397) -497 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_60_28_0.789175074175304_5.25256853221522_1.66691574198012-2 chr2 137731118 137732147 + 1.66691574198012 NA Intergenic Intergenic -524952 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_60_28_0.789175074175304_5.25256853221522_1.66691574198012-2 chr7 4659213 4659825 + 1.66691574198012 NA promoter-TSS (NM_172894) promoter-TSS (NM_172894) -569 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak1_60_28_0.789175074175304_5.25256853221522_1.66691574198012 chr18 60620757 60621430 + 1.66691574198012 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 3212 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_293_297_-0.319084734015142_8.05962615345459_1.66654417005019 chr15 80024615 80025843 + 1.66654417005019 NA Intergenic Intergenic -10421 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_54_72_-0.690992257529079_5.84432843011548_1.66629652699066 chr8 84501435 84502062 + 1.66629652699066 NA intron (NM_001252060, intron 3 of 47) intron (NM_001252060, intron 3 of 47) 86384 NM_001252061 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding common_peak1_87_45_0.648558466966803_5.84784118954041_1.66629652699065 chr11 59456731 59457662 + 1.66629652699065 NA non-coding (NR_037992, exon 6 of 6) non-coding (NR_037992, exon 6 of 6) 7151 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak2_119_66_0.550333395594869_6.34125588825521_1.66561336836223 chr9 21425008 21426322 + 1.66561336836223 NA intron (NM_001357721, intron 1 of 19) intron (NM_001357721, intron 1 of 19) 757 NM_001357719 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak2_80_98_-0.575974166951996_6.34136953660361_1.66561336836221 chr9 57428706 57429631 + 1.66561336836221 NA intron (NR_152145, intron 3 of 6) ORR1D2|LTR|ERVL-MaLR 10568 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_79_98_-0.593769636254423_6.3324718019524_1.66561336836221 chr18 33293353 33294567 + 1.66561336836221 NA Intergenic Intergenic -80098 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak2_222_233_-0.366240046599188_7.68724469628381_1.66544027304378 chr19 5050485 5051977 + 1.66544027304378 NA exon (NM_145495, exon 2 of 10) exon (NM_145495, exon 2 of 10) 423 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak2_156_91_0.477855354967393_6.76248963354071_1.66498071223652 chr15 82353655 82354632 + 1.66498071223652 NA exon (NM_025987, exon 1 of 3) exon (NM_025987, exon 1 of 3) 148 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-9 chr13 70657528 70657797 + 1.66449268468235 NA Intergenic Intergenic -20028 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-37 chr5 106996435 106996706 + 1.66449268468235 NA Intergenic Intergenic 32009 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-30 chr3 132865839 132866140 + 1.66449268468235 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 12607 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-20 chr18 75910569 75910920 + 1.66449268468235 NA intron (NM_145356, intron 2 of 4) intron (NM_145356, intron 2 of 4) 90566 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-6 chr12 3855451 3855917 + 1.66449268468235 NA intron (NM_007872, intron 3 of 22) intron (NM_007872, intron 3 of 22) 6560 NR_045884 100038522 Mm.417270 NR_045884 ENSMUSG00000073242 Dnmt3aos Gm10485 DNA methyltransferase 3A, opposite strand ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-45 chr8 119688994 119689201 + 1.66449268468235 NA Intergenic Intergenic -10912 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-8 chr4 128804463 128804752 + 1.66449268468235 NA intron (NM_001081098, intron 1 of 8) intron (NM_001081098, intron 1 of 8) 1505 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-6 chr19 30030057 30030309 + 1.66449268468235 NA promoter-TSS (NM_144873) promoter-TSS (NM_144873) -330 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-8 chr13 23683341 23683741 + 1.66449268468235 NA promoter-TSS (NM_001290380) promoter-TSS (NM_001290380) 418 NM_178189 319164 Mm.261973 NM_178189 ENSMUSG00000069270 Hist1h2ac - histone cluster 1, H2ac protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-12 chr8 36636859 36637127 + 1.66449268468235 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -23050 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-43 chr7 84533519 84533858 + 1.66449268468235 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 4734 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-3 chr10 93291326 93291765 + 1.66449268468235 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 19614 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-48 chr9 97956795 97957061 + 1.66449268468235 NA intron (NM_022319, intron 1 of 17) intron (NM_022319, intron 1 of 17) -46492 NR_110443 66737 Mm.445908 NR_110443 ENSMUSG00000090255 4921534H16Rik - RIKEN cDNA 4921534H16 gene ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-15 chr16 45031107 45031368 + 1.66449268468235 NA Intergenic Intergenic -62774 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-35 chr4 150863449 150864060 + 1.66449268468235 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 8684 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-2 chr11 48855845 48856145 + 1.66449268468235 NA Intergenic Intergenic 15425 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-44 chr7 98416727 98417048 + 1.66449268468235 NA Intergenic Intergenic -23529 NM_001130693 14918 Mm.389928 NM_001034890 ENSMUSG00000074003 Gucy2d - guanylate cyclase 2d protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-11 chr7 119794235 119794491 + 1.66449268468235 NA promoter-TSS (NM_027698) promoter-TSS (NM_027698) 176 NM_001004187 434234 Mm.38237 NM_028129 ENSMUSG00000030924 Rexo5 2610020H08Rik RNA exonuclease 5 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-9 chr6 146926614 146926855 + 1.66449268468235 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 27687 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-28 chr3 89286211 89286533 + 1.66449268468235 NA Intergenic Intergenic -5421 NM_001162425 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-16 chr16 92782355 92782653 + 1.66449268468235 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 43570 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-7 chr4 116144230 116144577 + 1.66449268468235 NA exon (NM_026547, exon 1 of 2) exon (NM_026547, exon 1 of 2) 213 NM_026547 68075 Mm.132803 NM_026547 ENSMUSG00000028701 Lurap1 1520402A15Rik|Lrp35a leucine rich adaptor protein 1 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-3 chr13 4772257 4772599 + 1.66449268468235 NA Intergenic Intergenic -163264 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-40 chr6 86905486 86905702 + 1.66449268468235 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 56077 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-14 chr16 18395764 18396167 + 1.66449268468235 NA intron (NM_001272031, intron 1 of 16) MIR3|SINE|MIR 3402 NM_001272032 11877 Mm.293599 NM_033474 ENSMUSG00000000325 Arvcf - armadillo repeat gene deleted in velocardiofacial syndrome protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-31 chr4 43370401 43370652 + 1.66449268468235 NA intron (NM_177195, intron 25 of 28) intron (NM_177195, intron 25 of 28) -11456 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-14 chr9 69878135 69878517 + 1.66449268468235 NA Intergenic Intergenic -111140 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-10 chr13 70726418 70726843 + 1.66449268468235 NA Intergenic Intergenic -88996 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-47 chr9 65578468 65578675 + 1.66449268468235 NA intron (NM_153119, intron 1 of 5) intron (NM_153119, intron 1 of 5) 1516 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-25 chr2 137112917 137113161 + 1.66449268468235 NA intron (NM_013822, intron 2 of 25) ID4|SINE|ID 3481 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-33 chr4 120815901 120816150 + 1.66449268468235 NA promoter-TSS (NM_001357192) promoter-TSS (NM_001357192) -312 NM_001357192 18046 Mm.318389 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-4 chr15 101164011 101164294 + 1.66449268468235 NA Intergenic Intergenic -9920 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ALK-4|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-46 chr9 63707568 63707876 + 1.66449268468235 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 50272 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-26 chr2 166072649 166073020 + 1.66449268468235 NA 3' UTR (NM_008679, exon 23 of 23) 3' UTR (NM_008679, exon 23 of 23) 80197 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-34 chr4 150050048 150050304 + 1.66449268468235 NA Intergenic Intergenic -18278 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-18 chr18 31633779 31634055 + 1.66449268468235 NA promoter-TSS (NM_001357554) promoter-TSS (NM_001357554) -451 NM_001357554 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-5 chr11 69325481 69325682 + 1.66449268468235 NA promoter-TSS (NM_010599) promoter-TSS (NM_010599) -677 NM_010599 16499 Mm.232472 NM_010599 ENSMUSG00000018470 Kcnab3 C330022D06Rik|Kcnab4|mKv(beta)4 potassium voltage-gated channel, shaker-related subfamily, beta member 3 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-13 chr9 25241618 25242015 + 1.66449268468235 NA Intergenic Intergenic -10175 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-38 chr5 135149752 135150018 + 1.66449268468235 NA intron (NM_013763, intron 1 of 6) CpG 174 NM_013763 27368 Mm.36746 NM_013763 ENSMUSG00000005374 Tbl2 C76179|WS-bTRP transducin (beta)-like 2 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-5 chr17 25555698 25556207 + 1.66449268468235 NA Intergenic Intergenic 14734 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-32 chr4 84206192 84206568 + 1.66449268468235 NA Intergenic Intergenic -161501 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-29 chr3 96248521 96248831 + 1.66449268468235 NA Intergenic Intergenic 1976 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-49 chr9 110748975 110749358 + 1.66449268468235 NA Intergenic Intergenic -2021 NM_011199 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-4 chr11 16803790 16803983 + 1.66449268468235 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 51683 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-12 chr14 54184596 54184913 + 1.66449268468235 NA Intergenic Intergenic 69175 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-23 chr2 32586254 32586733 + 1.66449268468235 NA promoter-TSS (NM_001276425) promoter-TSS (NM_001276425) -585 NM_001276425 20448 Mm.27446 NM_011373 ENSMUSG00000079442 St6galnac4 SIAT7-D|ST6GalNAcIV|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-17 chr17 28258698 28259101 + 1.66449268468235 NA intron (NM_011145, intron 2 of 7) intron (NM_011145, intron 2 of 7) -12809 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak1_6_18_-1.70211846050517_3.396868283191_1.66449268468235 chr18 60632548 60632784 + 1.66449268468235 NA Intergenic Intergenic -8361 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-36 chr5 38364961 38365329 + 1.66449268468235 NA intron (NM_145559, intron 9 of 10) intron (NM_145559, intron 9 of 10) 20756 NR_046191 78172 Mm.243835 NR_046191 ENSMUSG00000106932 4930487D11Rik - RIKEN cDNA 4930487D11 gene ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-41 chr7 4082611 4083170 + 1.66449268468235 NA intron (NR_033568, intron 6 of 8) B1_Mur4|SINE|Alu -19686 NM_001302676 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235 chr1 44567166 44567449 + 1.66449268468235 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 15636 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-22 chr2 27818561 27818863 + 1.66449268468235 NA Intergenic Intergenic -67713 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-11 chr13 99527964 99528401 + 1.66449268468235 NA Intergenic Intergenic -11580 NM_008634 17755 Mm.4173 NM_008634 ENSMUSG00000052727 Map1b A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5 microtubule-associated protein 1B protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-7 chr12 52475899 52476160 + 1.66449268468235 NA non-coding (NR_136881, exon 3 of 3) non-coding (NR_136881, exon 3 of 3) 4580 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-27 chr3 54755813 54756092 + 1.66449268468235 NA intron (NM_019483, intron 1 of 5) intron (NM_019483, intron 1 of 5) 370 NM_019483 55994 Mm.244353 NM_019483 ENSMUSG00000027796 Smad9 MADH6|Madh8|Madh9|Smad8 SMAD family member 9 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-2 chr10 12850736 12851066 + 1.66449268468235 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 10834 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-19 chr18 61526426 61526613 + 1.66449268468235 NA intron (NM_177828, intron 1 of 12) intron (NM_177828, intron 1 of 12) 10017 NM_177828 328967 Mm.488098 NM_177828 ENSMUSG00000045094 Arhgef37 4933429F08Rik Rho guanine nucleotide exchange factor (GEF) 37 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235 chr1 69462063 69462454 + 1.66449268468235 NA Intergenic Intergenic 223702 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-13 chr15 79360490 79360834 + 1.66449268468235 NA TTS (NM_001253817) TTS (NM_001253817) 12260 NM_001304832 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-39 chr6 31597097 31597373 + 1.66449268468235 NA Intergenic Intergenic 22268 NR_153845 105242621 Mm.389732 NR_153845 Gm6117 EG619959 predicted gene 6117 ncRNA unique_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235-10 chr7 19310031 19310276 + 1.66449268468235 NA promoter-TSS (NM_008036) promoter-TSS (NM_008036) -108 NM_001347586 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-50 chrX 93763247 93763631 + 1.66449268468235 NA Intergenic Intergenic 68656 NM_145630 236900 Mm.12775 NM_145630 ENSMUSG00000035232 Pdk3 2610001M10Rik|AI035637 pyruvate dehydrogenase kinase, isoenzyme 3 protein-coding common_peak2_6_18_-1.70211846050517_3.396868283191_1.66449268468235 chr15 81587593 81587877 + 1.66449268468235 NA intron (NM_177821, intron 1 of 30) intron (NM_177821, intron 1 of 30) 1521 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-21 chr19 42147081 42147476 + 1.66449268468235 NA promoter-TSS (NM_183195) promoter-TSS (NM_183195) -111 NM_183195 277010 Mm.206250 NM_183195 ENSMUSG00000044345 Marveld1 AI504298|Mrvldc1 MARVEL (membrane-associating) domain containing 1 protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-42 chr7 80166279 80166490 + 1.66449268468235 NA Intergenic Intergenic -20457 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding unique_peak1_21_6_1.3788754601127_3.49679265211395_1.66449268468235-24 chr2 38998079 38998438 + 1.66449268468235 NA promoter-TSS (NM_029687) promoter-TSS (NM_029687) -51 NM_029687 76646 Mm.358777 NM_029687 ENSMUSG00000035295 Wdr38 1700123D08Rik WD repeat domain 38 protein-coding common_peak1_93_49_0.622750133954086_5.95523125675177_1.66351452419095 chr8 104247949 104248674 + 1.66351452419095 NA intron (NR_045642, intron 1 of 8) intron (NR_045642, intron 1 of 8) 247 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak2_104_122_-0.517377890139225_6.68382556026963_1.66086157078375 chr19 43698707 43700046 + 1.66086157078375 NA intron (NM_053103, intron 3 of 12) intron (NM_053103, intron 3 of 12) 9687 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak1_148_86_0.483553900676538_6.684720446187_1.66086157078375 chr7 4149098 4150287 + 1.66086157078375 NA 5' UTR (NM_175529, exon 1 of 1) 5' UTR (NM_175529, exon 1 of 1) 180 NM_175529 243813 Mm.347643 NM_175529 ENSMUSG00000043432 Leng9 9530024C23Rik|F630035L11Rik leukocyte receptor cluster (LRC) member 9 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422 chr10 12963919 12964322 + 1.66030262873422 NA 5' UTR (NM_029075, exon 1 of 3) 5' UTR (NM_029075, exon 1 of 3) 139 NM_029075 74732 Mm.248648 NM_029075 ENSMUSG00000039232 Stx11 5830405C08Rik syntaxin 11 protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-3 chr1 91801461 91801801 + 1.66030262873422 NA exon (NM_007855, exon 1 of 2) exon (NM_007855, exon 1 of 2) 170 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-5 chr7 24388679 24389083 + 1.66030262873422 NA Intergenic Intergenic -10747 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-7 chr6 76708377 76708925 + 1.66030262873422 NA Intergenic Intergenic -533826 NR_155299 74342 Mm.292568 NM_028880 ENSMUSG00000060780 Lrrtm1 4632401D06Rik|AW125451 leucine rich repeat transmembrane neuronal 1 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-11 chr3 37354287 37354656 + 1.66030262873422 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 5818 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-7 chr17 24855541 24855864 + 1.66030262873422 NA intron (NM_001159626, intron 3 of 8) intron (NM_001159626, intron 3 of 8) 5035 NM_001159626 14651 Mm.43784 NM_024284 ENSMUSG00000024158 Hagh BC019817|Glo-2|Glo2|Rsp29 hydroxyacyl glutathione hydrolase protein-coding common_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422 chr12 31291403 31291779 + 1.66030262873422 NA intron (NM_008482, intron 12 of 32) intron (NM_008482, intron 12 of 32) 26297 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-7 chr3 106722609 106723028 + 1.66030262873422 NA intron (NM_028081, intron 1 of 2) intron (NM_028081, intron 1 of 2) 1136 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding common_peak2_31_11_1.1380225639234_4.15397378268285_1.66030262873422 chr10 79840494 79840776 + 1.66030262873422 NA intron (NR_038088, intron 3 of 4) intron (NR_038088, intron 3 of 4) -13797 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-17 chr9 77716039 77716509 + 1.66030262873422 NA Intergenic Intergenic -38261 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-3 chr10 86339990 86340606 + 1.66030262873422 NA intron (NM_011595, intron 2 of 4) intron (NM_011595, intron 2 of 4) 39886 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-8 chr8 84125369 84125780 + 1.66030262873422 NA promoter-TSS (NM_001013384) promoter-TSS (NM_001013384) -415 NM_001013384 244550 Mm.334654 NM_001013384 ENSMUSG00000012889 Podnl1 5832418A03Rik|Gm506 podocan-like 1 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-16 chr8 105601570 105601927 + 1.66030262873422 NA Intergenic Intergenic -3481 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-8 chr6 124809846 124810377 + 1.66030262873422 NA TTS (NM_009415) TTS (NM_009415) 1193 NM_001306053 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-9 chr2 32437376 32437759 + 1.66030262873422 NA intron (NM_146118, intron 1 of 10) intron (NM_146118, intron 1 of 10) -6416 NM_001164358 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-2 chr7 82479818 82480163 + 1.66030262873422 NA intron (NM_001190374, intron 7 of 29) intron (NM_001190374, intron 7 of 29) 144296 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-5 chr16 10784071 10784568 + 1.66030262873422 NA exon (NM_001271603, exon 2 of 2) exon (NM_001271603, exon 2 of 2) 1217 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-2 chr10 76442426 76442764 + 1.66030262873422 NA exon (NM_001282992, exon 1 of 42) exon (NM_001282992, exon 1 of 42) 317 NM_008787 18541 Mm.251794 NM_008787 ENSMUSG00000001151 Pcnt AW476095|C86676|KEN|Pcnt2|kendrin|m239Asp|m275Asp pericentrin (kendrin) protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-4 chr14 18500764 18501402 + 1.66030262873422 NA Intergenic Intergenic -169239 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-2 chr1 75292746 75293003 + 1.66030262873422 NA Intergenic Intergenic -14459 NM_009049 19711 Mm.4032 NM_009049 ENSMUSG00000033061 Resp18 AI851012 regulated endocrine-specific protein 18 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-14 chr7 99407954 99408319 + 1.66030262873422 NA intron (NM_001362166, intron 3 of 18) intron (NM_001362166, intron 3 of 18) 26618 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-8 chr2 26643645 26643922 + 1.66030262873422 NA Intergenic Intergenic -3539 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-6 chr3 40744780 40745090 + 1.66030262873422 NA promoter-TSS (NM_011020) promoter-TSS (NM_011020) -678 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak1_12_26_-1.32229434813511_4.09374032809591_1.66030262873422 chr9 119339808 119340047 + 1.66030262873422 NA exon (NM_010851, exon 1 of 6) exon (NM_010851, exon 1 of 6) 113 NM_010851 17874 Mm.213003 NM_010851 ENSMUSG00000032508 Myd88 - myeloid differentiation primary response gene 88 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422 chr1 58029253 58029647 + 1.66030262873422 NA promoter-TSS (NM_009676) promoter-TSS (NM_009676) -519 NM_009676 11761 Mm.26787 NM_009676 ENSMUSG00000063558 Aox1 AI196512|AI255253|Ao|Aox-1|Aox-2|Aox2|Moro|Ro aldehyde oxidase 1 protein-coding common_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-4 chr5 21053953 21054469 + 1.66030262873422 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 1700 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422 chr1 43968623 43969148 + 1.66030262873422 NA exon (NM_001310540, exon 11 of 29) exon (NM_001310540, exon 11 of 29) 34891 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-4 chr13 18791345 18791827 + 1.66030262873422 NA intron (NM_172120, intron 5 of 28) intron (NM_172120, intron 5 of 28) 74294 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-15 chr7 128348211 128348688 + 1.66030262873422 NA Intergenic MER5B|DNA|hAT-Charlie -50318 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-12 chr5 114412016 114412322 + 1.66030262873422 NA exon (NM_054093, exon 22 of 28) exon (NM_054093, exon 22 of 28) 7701 NR_105994 102465621 NR_105994 ENSMUSG00000098731 Mir7027 Gm27831|mmu-mir-7027 microRNA 7027 ncRNA common_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422 chr10 75070853 75071182 + 1.66030262873422 NA intron (NM_001081412, intron 1 of 22) intron (NM_001081412, intron 1 of 22) 10121 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-6 chr17 23992254 23992749 + 1.66030262873422 NA Intergenic Intergenic 5599 NM_133731 70835 Mm.157351 NM_133731 ENSMUSG00000045027 Prss22 4733401N09Rik|BSSP-4|SP001LA protease, serine 22 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-4 chr15 53165828 53166139 + 1.66030262873422 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 180200 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-2 chr1 74288634 74289407 + 1.66030262873422 NA 3' UTR (NM_027154, exon 12 of 12) 3' UTR (NM_027154, exon 12 of 12) 3986 NM_001039509 56695 Mm.384726 NM_019999 ENSMUSG00000026179 Pnkd 2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2 paroxysmal nonkinesiogenic dyskinesia protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-13 chr5 118465417 118465764 + 1.66030262873422 NA Intergenic Intergenic -95129 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-10 chr3 9521146 9521533 + 1.66030262873422 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 88746 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-9 chr9 65196708 65196972 + 1.66030262873422 NA Intergenic Intergenic -17850 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-6 chr5 89123699 89124366 + 1.66030262873422 NA intron (NM_001359211, intron 9 of 26) intron (NM_001359211, intron 9 of 26) 96066 NM_001359213 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding common_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-3 chr15 102460173 102460579 + 1.66030262873422 NA exon (NM_001170911, exon 3 of 4) exon (NM_001170911, exon 3 of 4) 1206 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding common_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-2 chr13 13954892 13955322 + 1.66030262873422 NA intron (NM_001362405, intron 1 of 12) CpG 433 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding unique_peak1_31_11_1.1380225639234_4.15397378268285_1.66030262873422-5 chr14 99099424 99099713 + 1.66030262873422 NA exon (NM_028315, exon 1 of 21) exon (NM_028315, exon 1 of 21) 144 NM_029320 52023 Mm.22835 NM_029320 ENSMUSG00000022064 Pibf1 - progesterone immunomodulatory binding factor 1 protein-coding unique_peak1_30_11_1.09254201840487_4.13123350992359_1.66030262873422-5 chr14 121107993 121108544 + 1.66030262873422 NA intron (NM_134082, intron 2 of 26) (TC)n|Simple_repeat|Simple_repeat 72694 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak2_12_26_-1.32229434813511_4.09374032809591_1.66030262873422-3 chr11 35954405 35954623 + 1.66030262873422 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 25575 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_76_38_0.69543223330894_5.63311833551672_1.65883209269362 chr4 152297302 152297984 + 1.65883209269362 NA intron (NM_133788, intron 1 of 4) (CCGGA)n|Simple_repeat|Simple_repeat 429 NM_133788 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak1_76_38_0.69543223330894_5.63311833551672_1.65883209269362-2 chrX 139997571 139998611 + 1.65883209269362 NA intron (NM_001172147, intron 1 of 7) intron (NM_001172147, intron 1 of 7) 504 NM_153586 237073 Mm.256670 NM_153586 ENSMUSG00000031433 Rbm41 BB131279|D330023I21Rik RNA binding motif protein 41 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-2 chr1 127219142 127219727 + 1.65862513589797 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 14448 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-5 chr4 11190204 11190719 + 1.65862513589797 NA promoter-TSS (NM_001037134) promoter-TSS (NM_001037134) -890 NM_001037134 12448 Mm.35867 NM_009830 ENSMUSG00000028212 Ccne2 - cyclin E2 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797 chr1 79857975 79858579 + 1.65862513589797 NA intron (NM_009255, intron 1 of 8) CpG 388 NM_009255 20720 Mm.3093 NM_009255 ENSMUSG00000026249 Serpine2 B230326M24Rik|PAI-1|PI-7|PI7|PN-1|Spi4 serine (or cysteine) peptidase inhibitor, clade E, member 2 protein-coding common_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-3 chr12 113015074 113015415 + 1.65862513589797 NA intron (NM_001081170, intron 1 of 23) intron (NM_001081170, intron 1 of 23) 736 NM_001291444 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak1_15_29_-1.17685055139072_4.31846531991316_1.65862513589797 chr12 69884913 69885192 + 1.65862513589797 NA intron (NM_201519, intron 1 of 30) intron (NM_201519, intron 1 of 30) -8053 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-3 chr11 5859721 5860261 + 1.65862513589797 NA Intergenic Intergenic -1875 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-8 chrX 159372342 159372840 + 1.65862513589797 NA intron (NM_025437, intron 1 of 6) CpG 413 NM_025437 66235 Mm.294623 NM_025437 ENSMUSG00000067194 Eif1ax 1500010B24Rik|AI426898|Eif1ay|eIF-4C eukaryotic translation initiation factor 1A, X-linked protein-coding unique_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-6 chr7 106215383 106215857 + 1.65862513589797 NA promoter-TSS (NM_029000).2 promoter-TSS (NM_029000).2 -280 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-2 chr12 24830851 24831315 + 1.65862513589797 NA promoter-TSS (NM_001083341) promoter-TSS (NM_001083341) -516 NM_026037 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-6 chr6 146885737 146886494 + 1.65862513589797 NA Intergenic MIRb|SINE|MIR -2379 NM_001355728 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-5 chr6 89348296 89348808 + 1.65862513589797 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 14061 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-4 chr2 84678417 84678773 + 1.65862513589797 NA promoter-TSS (NM_001290751) promoter-TSS (NM_001290751) 193 NM_025885 381379 Mm.219643 NM_025885 ENSMUSG00000027080 Med19 2410018M14Rik|3110040A13Rik|LCMR1 mediator complex subunit 19 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-7 chr7 49158818 49159082 + 1.65862513589797 NA intron (NR_154465, intron 3 of 3) intron (NR_154465, intron 3 of 3) 3208 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797 chr18 68191038 68191675 + 1.65862513589797 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -36590 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-3 chr19 44280301 44280826 + 1.65862513589797 NA Intergenic Intergenic -13113 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-2 chr7 90095872 90096402 + 1.65862513589797 NA Intergenic Intergenic 33337 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-4 chr5 31402932 31403367 + 1.65862513589797 NA Intergenic Intergenic -49287 NM_172993 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding common_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797 chr1 135258990 135259286 + 1.65862513589797 NA promoter-TSS (NM_001163131) promoter-TSS (NM_001163131) -666 NM_007921 13710 Mm.441439 NM_007921 ENSMUSG00000003051 Elf3 ESE-1|ESX|jen E74-like factor 3 protein-coding unique_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797-2 chr13 23745098 23745476 + 1.65862513589797 NA exon (NM_175653, exon 1 of 1) exon (NM_175653, exon 1 of 1) 234 NM_175653 319148 Mm.262517 NM_175653 ENSMUSG00000069310 Hist1h3c H3-143 histone cluster 1, H3c protein-coding unique_peak2_15_29_-1.17685055139072_4.31846531991316_1.65862513589797 chr1 162471587 162472073 + 1.65862513589797 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 6204 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak1_34_13_1.0440010704882_4.3293554573017_1.65862513589797-4 chr16 24513858 24514546 + 1.65862513589797 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -15112 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-39 chr3 63542425 63542658 + 1.65811743852845 NA Intergenic Intergenic 103290 NR_153189 102637430 Mm.209619 NR_153189 ENSMUSG00000104336 Gm34240 - predicted gene, 34240 ncRNA unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-5 chr13 100246977 100247204 + 1.65811743852845 NA intron (NM_010870, intron 1 of 14) intron (NM_010870, intron 1 of 14) 246 NM_010870 17951 Mm.290476 NM_010870 ENSMUSG00000071203 Naip5 Birc1e|Lgn1|Naip-rs3 NLR family, apoptosis inhibitory protein 5 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-22 chr15 103519504 103519708 + 1.65811743852845 NA intron (NM_001285890, intron 1 of 14) intron (NM_001285890, intron 1 of 14) 4629 NM_001285890 18574 Mm.390792 NM_008800 ENSMUSG00000022489 Pde1b Pde1b1 phosphodiesterase 1B, Ca2+-calmodulin dependent protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-13 chr2 30363853 30364053 + 1.65811743852845 NA promoter-TSS (NM_175392) promoter-TSS (NM_175392) -280 NM_001242407 108958 Mm.254974 NM_175392 ENSMUSG00000026858 Miga2 5730472N09Rik|AA408683|AI790341|C9orf54|Fam73b|R74766 mitoguardin 2 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-62 chrX 51680128 51680315 + 1.65811743852845 NA exon (NM_001290467, exon 2 of 3) exon (NM_001290467, exon 2 of 3) 256 NM_001290468 50786 Mm.252561 NM_015819 ENSMUSG00000062184 Hs6st2 6OST2 heparan sulfate 6-O-sulfotransferase 2 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-12 chr12 71881258 71881533 + 1.65811743852845 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) -8148 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-12 chr19 10189746 10189952 + 1.65811743852845 NA intron (NM_146094, intron 5 of 11) intron (NM_146094, intron 5 of 11) -1526 NR_105959 102465600 NR_105959 ENSMUSG00000098363 Mir6993 Gm27642|mmu-mir-6993 microRNA 6993 ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-45 chr4 145227862 145228101 + 1.65811743852845 NA intron (NM_011610, intron 2 of 9) intron (NM_011610, intron 2 of 9) 18889 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-56 chr8 81882956 81883149 + 1.65811743852845 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 519534 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-7 chr14 44257062 44257265 + 1.65811743852845 NA Intergenic Intergenic -43926 NR_073363 74328 Mm.439150 NR_073363 ENSMUSG00000115294 1700047E10Rik - RIKEN cDNA 1700047E10 gene ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-61 chrX 12940284 12940526 + 1.65811743852845 NA Intergenic Intergenic 3532 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-42 chr4 35004100 35004299 + 1.65811743852845 NA intron (NM_178061, intron 2 of 3) intron (NM_178061, intron 2 of 3) -92718 NR_040652 73696 Mm.1361 NR_040652 ENSMUSG00000085824 Platr9 2410114N07Rik pluripotency associated transcript 9 ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-13 chr12 102264991 102265187 + 1.65811743852845 NA intron (NM_172152, intron 16 of 16) intron (NM_172152, intron 16 of 16) -17985 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-23 chr16 92573951 92574182 + 1.65811743852845 NA Intergenic Intergenic 75919 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-5 chr10 93655718 93655931 + 1.65811743852845 NA intron (NM_021320, intron 2 of 9) PB1|SINE|Alu 10030 NR_027478 667338 Mm.454582 NR_027478 Gm8580 EG667338 ribosomal protein L29 pseudogene pseudo unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-59 chr9 23156163 23156379 + 1.65811743852845 NA Intergenic Intergenic -66805 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-32 chr19 55739998 55740192 + 1.65811743852845 NA Intergenic Intergenic -1715 NM_001331147 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-24 chr17 80752749 80752937 + 1.65811743852845 NA Intergenic Intergenic -24818 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-8 chr11 86597545 86597788 + 1.65811743852845 NA intron (NM_001356531, intron 10 of 11) B1_Mur3|SINE|Alu -13508 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-28 chr18 36473191 36473450 + 1.65811743852845 NA Intergenic B1_Mur4|SINE|Alu -18825 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-20 chr14 46977355 46977567 + 1.65811743852845 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -22533 NR_105813 102465206 NR_105813 ENSMUSG00000099036 Mir378c Gm27930|mmu-mir-378c microRNA 378c ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-43 chr4 133841103 133841327 + 1.65811743852845 NA Intergenic Intergenic 33516 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-7 chr11 53774344 53774599 + 1.65811743852845 NA intron (NM_001159393, intron 7 of 9) intron (NM_001159393, intron 7 of 9) 3998 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-30 chr19 16165722 16165917 + 1.65811743852845 NA non-coding (NR_033228, exon 1 of 1) non-coding (NR_033228, exon 1 of 1) 1721 NR_033228 595139 Mm.405662 NR_033228 E030024N20Rik 9030417F11Rik|Ppia-ps8 peptidylprolyl isomerase A pseudogene 8 pseudo unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-10 chr12 8864011 8864289 + 1.65811743852845 NA Intergenic Intergenic -57157 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-60 chr9 43072057 43072259 + 1.65811743852845 NA intron (NM_001359232, intron 1 of 40) intron (NM_001359232, intron 1 of 40) 33560 NM_001359232 69632 Mm.275266 NM_027144 ENSMUSG00000059495 Arhgef12 2310014B11Rik|AU019857|Larg|mKIAA0382 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-33 chr19 55838426 55838672 + 1.65811743852845 NA intron (NR_138565, intron 4 of 15) intron (NR_138565, intron 4 of 15) -56772 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-25 chr17 84120468 84120674 + 1.65811743852845 NA Intergenic Intergenic 41911 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-14 chr13 13953761 13954018 + 1.65811743852845 NA promoter-TSS (NM_001362404) promoter-TSS (NM_001362404) -785 NM_001362404 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-20 chr5 91102958 91103164 + 1.65811743852845 NA Intergenic Intergenic 28444 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-10 chr16 13944202 13944439 + 1.65811743852845 NA intron (NM_001289567, intron 2 of 4) (CAAT)n|Simple_repeat|Simple_repeat 3655 NM_033564 93734 Mm.76554 NM_033564 ENSMUSG00000022679 Mpv17l M-LP Mpv17 transgene, kidney disease mutant-like protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-58 chr8 122192403 122192629 + 1.65811743852845 NA Intergenic Intergenic -89625 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-29 chr18 61397159 61397405 + 1.65811743852845 NA TTS (NR_029879) TTS (NR_029879) 618 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-51 chr7 98362377 98362582 + 1.65811743852845 NA Intergenic Intergenic -1151 NM_001168539 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-40 chr3 95701154 95701457 + 1.65811743852845 NA Intergenic Intergenic -13388 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-50 chr7 43453907 43454102 + 1.65811743852845 NA intron (NR_075104, intron 3 of 5) MLT1K|LTR|ERVL-MaLR -3493 NR_106018 102465636 NR_106018 ENSMUSG00000099210 Mir7051 Gm27685|mmu-mir-7051 microRNA 7051 ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-63 chrX 142426223 142426529 + 1.65811743852845 NA Intergenic Intergenic -35841 NM_019477 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-34 chr2 5613772 5613971 + 1.65811743852845 NA intron (NM_001290374, intron 1 of 9) intron (NM_001290374, intron 1 of 9) 62175 NM_001290376 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-4 chr11 57650905 57651157 + 1.65811743852845 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) -1537 NR_153850 78762 Mm.362149 NR_153850 4933424L21Rik - RIKEN cDNA 4933424L21 gene ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-21 chr15 85544801 85544989 + 1.65811743852845 NA intron (NM_009528, intron 2 of 3) intron (NM_009528, intron 2 of 3) 33175 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-15 chr13 40983468 40983724 + 1.65811743852845 NA intron (NR_155347, intron 1 of 4) intron (NR_155347, intron 1 of 4) -17414 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-48 chr5 43869327 43869522 + 1.65811743852845 NA intron (NM_007646, intron 1 of 7) intron (NM_007646, intron 1 of 7) 615 NM_007646 12494 Mm.249873 NM_007646 ENSMUSG00000029084 Cd38 ADPRC 1|Cd38-rs1|I-19 CD38 antigen protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-16 chr13 45002361 45002594 + 1.65811743852845 NA promoter-TSS (NM_025772) promoter-TSS (NM_025772) -381 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-41 chr3 96237779 96238001 + 1.65811743852845 NA TTS (NM_178216) TTS (NM_178216) 1237 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-18 chr3 135212707 135212913 + 1.65811743852845 NA intron (NM_173762, intron 1 of 45) CpG 247 NM_173762 229841 Mm.161470 NM_173762 ENSMUSG00000045328 Cenpe 312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10 centromere protein E protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-2 chr10 27171433 27171656 + 1.65811743852845 NA intron (NM_008481, intron 29 of 63) intron (NM_008481, intron 29 of 63) -218322 NR_131034 75855 Mm.402080 NR_131034 ENSMUSG00000101636 4930579H20Rik - RIKEN cDNA 4930579H20 gene ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-35 chr2 16455938 16456144 + 1.65811743852845 NA intron (NM_026162, intron 1 of 13) intron (NM_026162, intron 1 of 13) 99737 NM_026162 67448 Mm.313938 NM_026162 ENSMUSG00000026748 Plxdc2 1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r plexin domain containing 2 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-27 chr18 35383953 35384140 + 1.65811743852845 NA intron (NM_001360814, intron 3 of 9) intron (NM_001360814, intron 3 of 9) 85906 NM_001360814 81500 Mm.291482 NM_030749 ENSMUSG00000024357 Sil1 1810057E01Rik|AI042831|wz endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-22 chr9 49893253 49893509 + 1.65811743852845 NA Intergenic Intergenic -93988 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-9 chr15 79996836 79997041 + 1.65811743852845 NA 3' UTR (NM_011057, exon 7 of 7) 3' UTR (NM_011057, exon 7 of 7) 2088 NR_106072 102465699 NR_106072 ENSMUSG00000099222 Mir7213 Gm27377|mmu-mir-7213 microRNA 7213 ncRNA unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-17 chr2 117799897 117800097 + 1.65811743852845 NA Intergenic Intergenic 12805 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-9 chr11 104401162 104401357 + 1.65811743852845 NA intron (NM_001359634, intron 3 of 14) intron (NM_001359634, intron 3 of 14) 41032 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-6 chr13 107385585 107385836 + 1.65811743852845 NA Intergenic Intergenic -84112 NR_045083 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-36 chr2 125255569 125255901 + 1.65811743852845 NA intron (NM_023595, intron 3 of 5) intron (NM_023595, intron 3 of 5) 8220 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845 chr1 58695938 58696138 + 1.65811743852845 NA promoter-TSS (NM_175370) promoter-TSS (NM_175370) -49 NM_175370 108812 Mm.442063 NM_175370 ENSMUSG00000047528 Als2cr12 4933405P16Rik|4933425F06Rik amyotrophic lateral sclerosis 2 chromosome region 12 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-23 chrX 49099863 49100086 + 1.65811743852845 NA intron (NM_001271448, intron 2 of 14) intron (NM_001271448, intron 2 of 14) 188268 NM_001271449 209224 Mm.327730 NM_145951 ENSMUSG00000031109 Enox2 APK1|Cova1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-16 chr2 71816585 71816852 + 1.65811743852845 NA exon (NM_001277970, exon 2 of 25) exon (NM_001277970, exon 2 of 25) 29779 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-52 chr7 111939220 111939519 + 1.65811743852845 NA Intergenic U2|snRNA|snRNA -84137 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-17 chr13 104490475 104490707 + 1.65811743852845 NA intron (NR_136938, intron 26 of 26) intron (NR_136938, intron 26 of 26) 202756 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-49 chr6 13605587 13605805 + 1.65811743852845 NA intron (NM_028990, intron 1 of 4) intron (NM_028990, intron 1 of 4) 2402 NR_155435 101118 Mm.254845 NM_028990 ENSMUSG00000029569 Tmem168 5730526F17Rik|8430437G11Rik|AI462344|AI504145 transmembrane protein 168 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-46 chr4 152097404 152097629 + 1.65811743852845 NA intron (NM_001285999, intron 1 of 20) intron (NM_001285999, intron 1 of 20) 797 NM_001285999 269608 Mm.332102 NM_001004156 ENSMUSG00000039713 Plekhg5 BC023181|Syx pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-11 chr17 46948809 46949037 + 1.65811743852845 NA intron (NM_146078, intron 33 of 46) intron (NM_146078, intron 33 of 46) 38438 NM_008938 19133 Mm.291370 NM_008938 ENSMUSG00000023978 Prph2 AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds peripherin 2 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-4 chr10 88031935 88032175 + 1.65811743852845 NA Intergenic Intergenic -59017 NM_029971 110312 Mm.391436 NM_029971 ENSMUSG00000035383 Pmch A230109K23Rik pro-melanin-concentrating hormone protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-8 chr15 51761645 51761861 + 1.65811743852845 NA Intergenic Intergenic 103708 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-55 chr8 69789927 69790162 + 1.65811743852845 NA Intergenic Intergenic -1119 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-3 chr10 82952701 82952975 + 1.65811743852845 NA Intergenic Intergenic -32659 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-47 chr5 30650834 30651041 + 1.65811743852845 NA intron (NM_175675, intron 1 of 5) intron (NM_175675, intron 1 of 5) 2998 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-15 chr2 31978052 31978256 + 1.65811743852845 NA intron (NM_172268, intron 3 of 35) intron (NM_172268, intron 3 of 35) 3704 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-18 chr13 110911527 110911904 + 1.65811743852845 NA Intergenic HAL1|LINE|L1 -7869 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-3 chr10 93298638 93298854 + 1.65811743852845 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 12413 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-54 chr8 36916389 36916577 + 1.65811743852845 NA intron (NM_001194940, intron 2 of 17) intron (NM_001194940, intron 2 of 17) 35959 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-6 chr11 53294687 53294878 + 1.65811743852845 NA intron (NM_008300, intron 1 of 18) intron (NM_008300, intron 1 of 18) 5697 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-14 chr2 31957357 31957575 + 1.65811743852845 NA intron (NM_145144, intron 2 of 5) intron (NM_145144, intron 2 of 5) 7163 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-31 chr19 43670641 43670847 + 1.65811743852845 NA intron (NM_145156, intron 1 of 3) MIRb|SINE|MIR 4137 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-19 chr14 30916191 30916410 + 1.65811743852845 NA intron (NM_008407, intron 11 of 20) B1_Mur4|SINE|Alu 7287 NM_008407 16426 Mm.4517 NM_008407 ENSMUSG00000006522 Itih3 AW108094|ITI-HC3|Intin3|Itih-3 inter-alpha trypsin inhibitor, heavy chain 3 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-21 chr8 21665524 21665812 + 1.65811743852845 NA promoter-TSS (NM_001177528) promoter-TSS (NM_001177528) -129 NM_001177528 100041952 Mm.465152 NM_001177528 ENSMUSG00000063206 Defa34 Gm15315 defensin, alpha, 34 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-38 chr3 57428025 57428227 + 1.65811743852845 NA intron (NM_145539, intron 2 of 4) intron (NM_145539, intron 2 of 4) 2716 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-11 chr12 52505921 52506182 + 1.65811743852845 NA Intergenic Intergenic -10026 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-2 chr1 151071949 151072148 + 1.65811743852845 NA Intergenic Intergenic -65986 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak2_1_8_-2.41872001850478_1.96056499218992_1.65811743852845-19 chr4 130079658 130079967 + 1.65811743852845 NA intron (NM_028266, intron 47 of 69) intron (NM_028266, intron 47 of 69) -27744 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-53 chr7 112709678 112709872 + 1.65811743852845 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 30455 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845 chr1 82625020 82625236 + 1.65811743852845 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 38207 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-57 chr8 95220245 95220435 + 1.65811743852845 NA Intergenic B1F1|SINE|Alu -77800 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-37 chr3 21761606 21761845 + 1.65811743852845 NA Intergenic Intergenic -314927 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-44 chr4 137492648 137492835 + 1.65811743852845 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 23938 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_9_2_1.47178942182376_2.32085721163304_1.65811743852845-26 chr18 35193380 35193596 + 1.65811743852845 NA intron (NM_009818, intron 7 of 17) intron (NM_009818, intron 7 of 17) 21536 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak2_253_261_-0.342838359536778_7.86200382176906_1.65704265259044 chr7 80400331 80402610 + 1.65704265259044 NA intron (NM_001081454, intron 1 of 15) intron (NM_001081454, intron 1 of 15) 1342 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak2_75_93_-0.592480376705735_6.25834866332477_1.6564650715936 chr5 74535565 74536265 + 1.6564650715936 NA intron (NM_024183, intron 1 of 16) CpG 433 NM_001159574 66899 Mm.272468 NM_024183 ENSMUSG00000029227 Fip1l1 1300019H17Rik|Rje FIP1 like 1 (S. cerevisiae) protein-coding common_peak1_199_121_0.417451565442933_7.13946312028435_1.65474951701149 chr6 17307058 17309448 + 1.65474951701149 NA intron (NM_001243064, intron 1 of 1) intron (NM_001243064, intron 1 of 1) 613 NM_001243064 12389 Mm.28278 NM_007616 ENSMUSG00000007655 Cav1 Cav|Cav-1 caveolin 1, caveolae protein protein-coding common_peak1_46_20_0.881343880523294_4.83298936304041_1.65365064026544-2 chr13 64003597 64004164 + 1.65365064026544 NA Intergenic Intergenic 85321 NM_008291 15487 Mm.5109 NM_008291 ENSMUSG00000033122 Hsd17b3 - hydroxysteroid (17-beta) dehydrogenase 3 protein-coding unique_peak1_46_20_0.881343880523294_4.83298936304041_1.65365064026544 chr12 29945448 29946211 + 1.65365064026544 NA intron (NM_181395, intron 1 of 22) intron (NM_181395, intron 1 of 22) 7793 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak2_23_39_-1.01105244844211_4.81640187066631_1.65365064026544 chr10 37138486 37138904 + 1.65365064026544 NA 5' UTR (NM_008538, exon 1 of 2) 5' UTR (NM_008538, exon 1 of 2) 231 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_23_39_-1.01105244844211_4.81640187066631_1.65365064026544 chr3 119956437 119956796 + 1.65365064026544 NA Intergenic Intergenic -173228 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak1_46_20_0.881343880523294_4.83298936304041_1.65365064026544-3 chr18 73753882 73754382 + 1.65365064026544 NA intron (NM_053255, intron 1 of 3) intron (NM_053255, intron 1 of 3) 347 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak1_46_20_0.881343880523294_4.83298936304041_1.65365064026544 chr1 75397472 75398240 + 1.65365064026544 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) -2229 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_190_115_0.424249189819445_7.07010559003729_1.65316997760033 chr3 19310187 19312193 + 1.65316997760033 NA 5' UTR (NM_001122759, exon 1 of 13) 5' UTR (NM_001122759, exon 1 of 13) 132 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_140_156_-0.447178822935362_7.07103133742395_1.65316997760033 chr11 104549036 104550514 + 1.65316997760033 NA promoter-TSS (NM_010858) promoter-TSS (NM_010858) 845 NM_001285990 217232 Mm.89845 NM_145436 ENSMUSG00000020687 Cdc27 AI452358|APC3|BC023187 cell division cycle 27 protein-coding common_peak2_133_149_-0.454320652428737_7.00165836428151_1.65312700741454 chr17 84073380 84074459 + 1.65312700741454 NA Intergenic Intergenic -4741 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_111_129_-0.504778678383018_6.76997847383694_1.65251929738861 chr8 70633172 70633990 + 1.65251929738861 NA Intergenic Intergenic -1125 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak2_111_129_-0.504778678383018_6.76997847383694_1.65251929738861 chr19 56821139 56822173 + 1.65251929738861 NA Intergenic Intergenic -4553 NM_001002238 83561 Mm.247541 NM_031387 ENSMUSG00000025081 Tdrd1 MTR-1 tudor domain containing 1 protein-coding common_peak2_225_235_-0.359375327274835_7.70295538572442_1.6523496236071 chr13 58127764 58129890 + 1.6523496236071 NA promoter-TSS (NM_029872) promoter-TSS (NM_029872) -271 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak2_227_141_0.386141978121431_7.3428181085654_1.6500259668133 chr19 10948072 10949240 + 1.6500259668133 NA exon (NM_023731, exon 1 of 4) exon (NM_023731, exon 1 of 4) 610 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak1_107_58_0.582848821965073_6.17406746034438_1.64919119394264-2 chr2 167760691 167762226 + 1.64919119394264 NA Intergenic Intergenic 70281 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_107_58_0.582848821965073_6.17406746034438_1.64919119394264 chr4 64076757 64077876 + 1.64919119394264 NA Intergenic Intergenic -30301 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_107_58_0.582848821965073_6.17406746034438_1.64919119394264 chr2 155235888 155237258 + 1.64919119394264 NA promoter-TSS (NM_001291108) promoter-TSS (NM_001291108) -35 NR_111890 67068 Mm.23693 NM_025947 ENSMUSG00000047459 Dynlrb1 2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1 dynein light chain roadblock-type 1 protein-coding common_peak2_120_67_0.540847919725985_6.35788680111333_1.64896270734849 chr9 58442040 58442943 + 1.64896270734849 NA Intergenic Intergenic -12682 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak2_156_171_-0.424847443677692_7.21384103286325_1.64852438217529 chr4 136143903 136145200 + 1.64852438217529 NA intron (NM_008321, intron 2 of 2) CpG-10505 729 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_209_128_0.406854380203516_7.21465444552501_1.64852438217524 chr18 75376668 75378269 + 1.64852438217524 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 10103 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak1_82_42_0.66205886618882_5.75729418779651_1.64821041203306 chr10 24468632 24470150 + 1.64821041203306 NA Intergenic Intergenic -126051 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_50_68_-0.717857997214263_5.74959545817104_1.64821041203306 chr13 93191225 93192254 + 1.64821041203306 NA intron (NR_154997, intron 1 of 15) intron (NR_154997, intron 1 of 15) 678 NM_001361536 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding common_peak1_41_59_-0.794355899589139_5.50971264581395_1.64648158885269 chr5 92309293 92309945 + 1.64648158885269 NA intron (NM_172713, intron 1 of 21) CpG 405 NM_172713 231452 Mm.86564 NM_172713 ENSMUSG00000029415 Sdad1 4931421J16|AA591032|AW538460 SDA1 domain containing 1 protein-coding common_peak2_41_59_-0.794355899589139_5.50971264581395_1.64648158885269 chr13 51100893 51101380 + 1.64648158885269 NA promoter-TSS (NR_029463) promoter-TSS (NR_029463) 256 NM_146043 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding common_peak1_41_59_-0.794355899589139_5.50971264581395_1.64648158885269-2 chr7 97510605 97511361 + 1.64648158885269 NA intron (NM_001358012, intron 11 of 22) intron (NM_001358012, intron 11 of 22) 30027 NM_001358012 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding common_peak2_42_59_-0.760648065399087_5.52656656290898_1.64648158885269-3 chr15 80485491 80485870 + 1.64648158885269 NA intron (NM_001163189, intron 4 of 5) intron (NM_001163189, intron 4 of 5) -47077 NR_155274 102633578 Mm.397484 NR_155274 ENSMUSG00000115888 Gm31369 - predicted gene, 31369 ncRNA common_peak2_41_59_-0.794355899589139_5.50971264581395_1.64648158885269-2 chr14 8098284 8099159 + 1.64648158885269 NA intron (NM_001360314, intron 1 of 19) intron (NM_001360314, intron 1 of 19) 510 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding common_peak2_71_35_0.714731267657148_5.52729063527089_1.64648158885269 chr3 40893577 40894031 + 1.64648158885269 NA promoter-TSS (NM_026622) promoter-TSS (NM_026622) -473 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding common_peak2_42_59_-0.760648065399087_5.52656656290898_1.64648158885269 chr10 76032657 76033314 + 1.64648158885269 NA intron (NM_177475, intron 1 of 1) intron (NM_177475, intron 1 of 1) 373 NM_177475 64453 Mm.80609 NM_177475 ENSMUSG00000049764 Zfp280b D10Jhu82e|Suhw2 zinc finger protein 280B protein-coding common_peak2_71_35_0.714731267657148_5.52729063527089_1.64648158885269-2 chr8 124330577 124331191 + 1.64648158885269 NA intron (NM_139272, intron 8 of 15) intron (NM_139272, intron 8 of 15) 99490 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_42_59_-0.760648065399087_5.52656656290898_1.64648158885269-2 chr11 70647204 70647756 + 1.64648158885269 NA promoter-TSS (NM_024211) promoter-TSS (NM_024211) 193 NM_027445 70510 Mm.261818 NM_027445 ENSMUSG00000040746 Rnf167 0610010G05Rik|5730408C10Rik|AU019305|AV328608 ring finger protein 167 protein-coding common_peak1_42_59_-0.760648065399087_5.52656656290898_1.64648158885269 chr15 61984807 61985219 + 1.64648158885269 NA promoter-TSS (NM_010849) promoter-TSS (NM_010849) -328 NM_001177354 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_87_105_-0.555800031539383_6.45002043879351_1.64488722754373 chr1 151227040 151227837 + 1.64488722754373 NA Intergenic Intergenic 89404 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak2_128_72_0.530198593983625_6.45492385587183_1.6448872275437 chr19 55542818 55543559 + 1.6448872275437 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 159016 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_127_72_0.519050546618046_6.44934983218904_1.6448872275437 chr4 125122920 125124239 + 1.6448872275437 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 4302 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_101_54_0.602251766466002_6.08248559675766_1.64416639885613-2 chr19 4438982 4439617 + 1.64416639885613 NA promoter-TSS (NR_045990) promoter-TSS (NR_045990) -24 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak2_65_83_-0.632306417954246_6.07616421380164_1.64416639885613 chr12 84970387 84971677 + 1.64416639885613 NA promoter-TSS (NM_178065) promoter-TSS (NM_178065) 102 NM_028632 73736 Mm.341848 NM_028632 ENSMUSG00000021243 Fcf1 1110008B24Rik FCF1 rRNA processing protein protein-coding common_peak1_65_83_-0.632306417954246_6.07616421380164_1.64416639885613 chr12 79598759 79599874 + 1.64416639885613 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 301965 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_101_54_0.602251766466002_6.08248559675766_1.64416639885613-3 chr3 37313761 37314570 + 1.64416639885613 NA intron (NM_001255992, intron 1 of 1) intron (NM_001255992, intron 1 of 1) 1611 NM_001008502 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding common_peak1_101_54_0.602251766466002_6.08248559675766_1.64416639885613 chr15 81359613 81360756 + 1.64416639885613 NA intron (NM_011399, intron 1 of 8) intron (NM_011399, intron 1 of 8) 581 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding common_peak1_174_104_0.442657414487072_6.93557422490966_1.64381211410686 chr5 144962741 144964009 + 1.64381211410686 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 2455 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_432_420_-0.262982331706709_8.58618525721304_1.64373102192808 chr2 151910496 151914202 + 1.64373102192808 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 1142 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_55_73_-0.68480925141027_5.86704873992382_1.64294012011226 chr2 158168181 158169334 + 1.64294012011226 NA Intergenic Intergenic -22365 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_55_73_-0.68480925141027_5.86704873992382_1.64294012011226-2 chr3 68468637 68469946 + 1.64294012011226 NA intron (NM_001282045, intron 1 of 7) intron (NM_001282045, intron 1 of 7) 1108 NM_001282045 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_88_46_0.63371837472229_5.87144803903878_1.64294012011226 chr14 122107135 122107575 + 1.64294012011226 NA promoter-TSS (NR_015586) promoter-TSS (NR_015586) 273 NM_080556 68059 Mm.275191 NM_080556 ENSMUSG00000025544 Tm9sf2 1500001N15Rik|AA536814|D14Ertd64e|P76 transmembrane 9 superfamily member 2 protein-coding common_peak1_94_50_0.609340031754286_5.97709535784864_1.64187255238485 chr6 120145781 120146868 + 1.64187255238485 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -47499 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_60_78_-0.656624678874227_5.97546840873999_1.64187255238484 chr7 122067459 122068114 + 1.64187255238484 NA promoter-TSS (NM_026140) promoter-TSS (NM_026140) 588 NM_138589 28018 Mm.282122 NM_138589 ENSMUSG00000030870 Ubfd1 AI467302|D7Wsu105e|D7Wsu128e|Ubph ubiquitin family domain containing 1 protein-coding common_peak2_60_78_-0.656624678874227_5.97546840873999_1.64187255238484 chr18 31910835 31911531 + 1.64187255238484 NA exon (NM_026006, exon 1 of 1) exon (NM_026006, exon 1 of 1) 720 NM_026006 67158 Mm.31537 NM_026006 ENSMUSG00000044982 Sft2d3 2610206C24Rik|AI847965|AW046173 SFT2 domain containing 3 protein-coding common_peak2_114_63_0.555455220976889_6.27772761048844_1.63896674060668 chr11 94327408 94328649 + 1.63896674060668 NA promoter-TSS (NM_146024) promoter-TSS (NM_146024) 27 NM_146024 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak2_114_63_0.555455220976889_6.27772761048844_1.63896674060668-3 chr5 101816802 101817903 + 1.63896674060668 NA intron (NM_173370, intron 11 of 12) intron (NM_173370, intron 11 of 12) 52222 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak2_114_63_0.555455220976889_6.27772761048844_1.63896674060668-2 chr19 38037624 38038227 + 1.63896674060668 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 5652 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_51_23_0.833520694160713_5.00172284780151_1.63799378205027-2 chr12 111704796 111705097 + 1.63799378205027 NA Intergenic Intergenic 8007 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak1_27_43_-0.927732524845372_4.99556535621461_1.63799378205027 chr12 111946439 111946812 + 1.63799378205027 NA Intergenic Intergenic -2143 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA unique_peak1_51_23_0.833520694160713_5.00172284780151_1.63799378205027 chr1 131135425 131136309 + 1.63799378205027 NA intron (NM_145508, intron 2 of 2) intron (NM_145508, intron 2 of 2) 2367 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak2_27_43_-0.927732524845372_4.99556535621461_1.63799378205027 chr10 7119712 7120197 + 1.63799378205027 NA 3' UTR (NM_172546, exon 13 of 13) 3' UTR (NM_172546, exon 13 of 13) 92283 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-4 chr15 62392729 62393563 + 1.63799378205027 NA Intergenic Intergenic -173695 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-3 chr11 117941540 117942051 + 1.63799378205027 NA Intergenic Intergenic 27571 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_51_23_0.833520694160713_5.00172284780151_1.63799378205027 chr8 121977717 121978420 + 1.63799378205027 NA promoter-TSS (NR_106096) promoter-TSS (NR_106096) 44 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak2_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-2 chr11 48992416 48992898 + 1.63799378205027 NA promoter-TSS (NM_011579) promoter-TSS (NM_011579) -411 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak2_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-6 chr8 103372978 103373500 + 1.63799378205027 NA Intergenic Intergenic -25705 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_51_23_0.833520694160713_5.00172284780151_1.63799378205027 chr11 70014947 70015333 + 1.63799378205027 NA exon (NM_017366, exon 2 of 20) exon (NM_017366, exon 2 of 20) 288 NM_017366 11370 Mm.18630 NM_017366 ENSMUSG00000018574 Acadvl vlcad acyl-Coenzyme A dehydrogenase, very long chain protein-coding common_peak2_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-5 chr5 122707033 122707501 + 1.63799378205027 NA promoter-TSS (NM_011026) promoter-TSS (NM_011026) -277 NM_001310720 18438 Mm.290884 NM_011026 ENSMUSG00000029470 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 protein-coding common_peak1_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-2 chr4 56802224 56802486 + 1.63799378205027 NA promoter-TSS (NM_026079) promoter-TSS (NM_026079) -24 NM_026079 230233 Mm.282743 NM_026079 ENSMUSG00000028431 Ikbkap 3110040G09Rik|6030413P05|C78473|Elp1|IKAP inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein protein-coding unique_peak1_51_23_0.833520694160713_5.00172284780151_1.63799378205027-2 chr3 104674105 104674732 + 1.63799378205027 NA Intergenic Intergenic 35754 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak1_27_43_-0.927732524845372_4.99556535621461_1.63799378205027-3 chr9 67024491 67025051 + 1.63799378205027 NA intron (NM_001164256, intron 7 of 7) intron (NM_001164256, intron 7 of 7) 19100 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_51_23_0.833520694160713_5.00172284780151_1.63799378205027-3 chr19 56995321 56995880 + 1.63799378205027 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 12975 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_38_55_-0.800981145375035_5.40686434937009_1.63721186903097 chr2 125705952 125706847 + 1.63721186903097 NA intron (NM_199022, intron 1 of 11) intron (NM_199022, intron 1 of 11) 17749 NM_199022 271849 Mm.425101 NM_199022 ENSMUSG00000035109 Shc4 6230417E10Rik|9930029B02Rik|Gm685|RaLP SHC (Src homology 2 domain containing) family, member 4 protein-coding unique_peak2_38_55_-0.800981145375035_5.40686434937009_1.63721186903097 chr7 12818074 12818830 + 1.63721186903097 NA intron (NM_026046, intron 1 of 1) intron (NM_026046, intron 1 of 1) 408 NM_026046 67230 Mm.333574 NM_026046 ENSMUSG00000057894 Zfp329 2810439M05Rik|4632409L22Rik|ZNF329 zinc finger protein 329 protein-coding common_peak1_38_55_-0.800981145375035_5.40686434937009_1.63721186903097 chr6 127453694 127454068 + 1.63721186903097 NA intron (NM_001346512, intron 1 of 5) CpG 254 NM_001346512 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding common_peak2_38_55_-0.800981145375035_5.40686434937009_1.63721186903097-2 chr9 56226794 56227688 + 1.63721186903097 NA exon (NM_172924, exon 6 of 7) exon (NM_172924, exon 6 of 7) -66171 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_66_32_0.737158898281934_5.41297356849942_1.63721186903096-4 chr3 90265792 90266415 + 1.63721186903096 NA promoter-TSS (NM_201407) promoter-TSS (NM_201407) -411 NM_201407 229541 Mm.30571 NM_201407 ENSMUSG00000042404 Dennd4b - DENN/MADD domain containing 4B protein-coding common_peak1_66_32_0.737158898281934_5.41297356849942_1.63721186903096 chr10 61089447 61090279 + 1.63721186903096 NA intron (NM_025273, intron 1 of 3) intron (NM_025273, intron 1 of 3) 532 NM_025273 13180 Mm.39473 NM_025273 ENSMUSG00000020098 Pcbd1 Dcoh|Pcbd|Pcd|Phs pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 protein-coding common_peak1_66_32_0.737158898281934_5.41297356849942_1.63721186903096-3 chr2 150903769 150904582 + 1.63721186903096 NA intron (NM_001356549, intron 1 of 13) intron (NM_001356549, intron 1 of 13) 556 NM_024465 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding common_peak1_66_32_0.737158898281934_5.41297356849942_1.63721186903096-2 chr2 91257271 91258400 + 1.63721186903096 NA intron (NM_028733, intron 1 of 10) intron (NM_028733, intron 1 of 10) 506 NM_028733 80708 Mm.236650 NM_028733 ENSMUSG00000027257 Pacsin3 4921507A02Rik|6330413E15Rik|AW413130 protein kinase C and casein kinase substrate in neurons 3 protein-coding common_peak1_66_32_0.737158898281934_5.41297356849942_1.63721186903096-5 chr4 151988110 151989050 + 1.63721186903096 NA intron (NM_175152, intron 1 of 3) intron (NM_175152, intron 1 of 3) 406 NM_175152 69876 Mm.226820 NM_175152 ENSMUSG00000039759 Thap3 2010013E08Rik|2210418H06Rik THAP domain containing, apoptosis associated protein 3 protein-coding common_peak1_66_32_0.737158898281934_5.41297356849942_1.63721186903096-6 chr5 29569273 29570088 + 1.63721186903096 NA intron (NM_133907, intron 1 of 22) CpG 438 NM_133907 100763 Mm.137746 NM_133907 ENSMUSG00000039000 Ube3c AI853514|mKIAA0010 ubiquitin protein ligase E3C protein-coding common_peak2_66_32_0.737158898281934_5.41297356849942_1.63721186903096 chr10 97060037 97060755 + 1.63721186903096 NA intron (NR_045358, intron 4 of 4) intron (NR_045358, intron 4 of 4) 24628 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_385_254_0.29574395403809_8.1422254138779_1.6365848183659 chr19 42017133 42019418 + 1.6365848183659 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -17763 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding common_peak2_166_180_-0.409973515056661_7.29485912955488_1.6357329750111 chr11 99229974 99231346 + 1.6357329750111 NA 5' UTR (NM_020618, exon 1 of 11) 5' UTR (NM_020618, exon 1 of 11) 357 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding common_peak1_167_99_0.454568547098168_6.87114046332381_1.63547823700351 chr2 21235239 21236882 + 1.63547823700351 NA Intergenic (CAGA)n|Simple_repeat|Simple_repeat 30336 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak2_151_88_0.479320064432261_6.71539346318253_1.63495066886474 chr19 17394050 17395000 + 1.63495066886474 NA intron (NM_019437, intron 1 of 3) intron (NM_019437, intron 1 of 3) 482 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak2_281_179_0.348533850053346_7.66612002135635_1.6349396871326 chr10 67536290 67539171 + 1.6349396871326 NA promoter-TSS (NM_010118) promoter-TSS (NM_010118) -139 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding common_peak1_279_284_-0.324627055226033_7.99250458143909_1.63372144545932 chr2 173261956 173263722 + 1.63372144545932 NA intron (NM_022995, intron 1 of 3) ID_B1|SINE|B4 13694 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_82_100_-0.569887861860876_6.37326755182136_1.63271600129193 chr15 75271711 75272526 + 1.63271600129193 NA 3' UTR (NM_008530, exon 4 of 4) 3' UTR (NM_008530, exon 4 of 4) 3697 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak2_46_64_-0.7487065097264_5.64801455816525_1.63192341342353 chr8 61275554 61276701 + 1.63192341342353 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) 12745 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak2_46_64_-0.7487065097264_5.64801455816525_1.63192341342353 chr18 36678516 36679420 + 1.63192341342353 NA promoter-TSS (NM_001083317) promoter-TSS (NM_001083317) -247 NM_001360989 67843 Mm.273350 NM_026404 ENSMUSG00000033272 Slc35a4 2610030J16Rik solute carrier family 35, member A4 protein-coding common_peak1_77_39_0.677390702221961_5.66062344599834_1.63192341342353 chr6 17211822 17212585 + 1.63192341342353 NA Intergenic Intergenic 14096 NR_102304 319682 Mm.136046 NR_102304 ENSMUSG00000085171 D830026I12Rik - RIKEN cDNA D830026I12 gene ncRNA common_peak2_77_39_0.677390702221961_5.66062344599834_1.63192341342353 chr6 140622074 140622456 + 1.63192341342353 NA promoter-TSS (NM_178803) promoter-TSS (NM_178803) -398 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_77_39_0.677390702221961_5.66062344599834_1.63192341342353-3 chr9 88270221 88271271 + 1.63192341342353 NA Intergenic Intergenic -56863 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_46_64_-0.7487065097264_5.64801455816525_1.63192341342353-2 chr6 142276282 142276876 + 1.63192341342353 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) 2295 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak1_77_39_0.677390702221961_5.66062344599834_1.63192341342353-2 chr9 72275286 72276109 + 1.63192341342353 NA intron (NM_146224, intron 1 of 21) intron (NM_146224, intron 1 of 21) 809 NM_001311105 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148-6 chr3 87161231 87161965 + 1.63185160949148 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 13149 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148 chr1 20618732 20619402 + 1.63185160949148 NA Intergenic Intergenic -1010 NM_153179 241035 Mm.249253 NM_153179 ENSMUSG00000043760 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148-3 chr14 45318035 45318799 + 1.63185160949148 NA exon (NM_015774, exon 1 of 16) exon (NM_015774, exon 1 of 16) 155 NM_015774 50527 Mm.387108 NM_015774 ENSMUSG00000021831 Ero1l ERO1-L|Ero1a ERO1-like (S. cerevisiae) protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148-2 chr13 63186504 63187286 + 1.63185160949148 NA intron (NM_001289926, intron 7 of 15) intron (NM_001289926, intron 7 of 15) -53134 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148-4 chr14 57296480 57297224 + 1.63185160949148 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 101631 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148-5 chr19 32346608 32347073 + 1.63185160949148 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 2476 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_61_29_0.763558943944263_5.28867006758065_1.63185160949148-7 chr7 45705825 45706751 + 1.63185160949148 NA intron (NM_016974, intron 1 of 3) intron (NM_016974, intron 1 of 3) 1041 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak1_31_47_-0.861977436076605_5.15397378268285_1.63155726056134 chr10 17110596 17111035 + 1.63155726056134 NA Intergenic Intergenic -15033 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_30_47_-0.90745798159513_5.13123350992359_1.63155726056134 chr6 18848692 18849139 + 1.63155726056134 NA intron (NM_133939, intron 1 of 3) intron (NM_133939, intron 1 of 3) 280 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding common_peak2_30_47_-0.90745798159513_5.13123350992359_1.63155726056134 chr8 120488916 120489560 + 1.63155726056134 NA intron (NM_198671, intron 1 of 15) CpG-14576 372 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_31_47_-0.861977436076605_5.15397378268285_1.63155726056134 chr1 36326486 36327185 + 1.63155726056134 NA Intergenic Intergenic 19102 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak2_30_47_-0.90745798159513_5.13123350992359_1.63155726056134-2 chr8 85700251 85701251 + 1.63155726056134 NA promoter-TSS (NR_106189) promoter-TSS (NR_106189) -154 NR_106189 102465898 NR_106189 ENSMUSG00000098388 Mir8109 Gm27495|mmu-mir-8109 microRNA 8109 ncRNA common_peak2_31_47_-0.861977436076605_5.15397378268285_1.63155726056134-2 chr1 59430171 59430835 + 1.63155726056134 NA Intergenic Intergenic -51644 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak2_31_47_-0.861977436076605_5.15397378268285_1.63155726056134 chr17 35834761 35835967 + 1.63155726056134 NA exon (NM_011655, exon 4 of 4) exon (NM_011655, exon 4 of 4) 2937 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding unique_peak1_56_26_0.795111554609133_5.15244327946803_1.63155726056133 chr11 74573294 74574308 + 1.63155726056133 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 16357 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_56_26_0.795111554609133_5.15244327946803_1.63155726056133-2 chr17 15500029 15500402 + 1.63155726056133 NA intron (NM_013684, intron 1 of 7) CpG 327 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding common_peak1_56_26_0.795111554609133_5.15244327946803_1.63155726056133 chr11 113031427 113032608 + 1.63155726056133 NA Intergenic Intergenic 169821 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_56_26_0.795111554609133_5.15244327946803_1.63155726056133-4 chr3 101571077 101571607 + 1.63155726056133 NA Intergenic Intergenic 33365 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_56_26_0.795111554609133_5.15244327946803_1.63155726056133-3 chr2 24440479 24441244 + 1.63155726056133 NA intron (NM_011040, intron 6 of 11) intron (NM_011040, intron 6 of 11) 34738 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_56_26_0.795111554609133_5.15244327946803_1.63155726056133 chr10 61089446 61090039 + 1.63155726056133 NA intron (NM_025273, intron 1 of 3) intron (NM_025273, intron 1 of 3) 411 NM_025273 13180 Mm.39473 NM_025273 ENSMUSG00000020098 Pcbd1 Dcoh|Pcbd|Pcd|Phs pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 protein-coding common_peak1_143_83_0.485283866747456_6.63495935615249_1.63121011194297 chr19 3574703 3576083 + 1.63121011194297 NA intron (NM_001360430, intron 1 of 22) CpG 356 NM_001360430 52036 Mm.284686 NM_028999 ENSMUSG00000024908 Ppp6r3 4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558 protein phosphatase 6, regulatory subunit 3 protein-coding common_peak1_143_83_0.485283866747456_6.63495935615249_1.63121011194297-2 chr5 134455076 134456800 + 1.63121011194297 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 324 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_100_118_-0.52531986405053_6.63215783128268_1.63121011194295 chr8 47931920 47933094 + 1.63121011194295 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 58044 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_71_89_-0.607196827230214_6.18825468271457_1.63071475376328-2 chr15 53616100 53617000 + 1.63071475376328 NA intron (NM_177225, intron 4 of 4) intron (NM_177225, intron 4 of 4) -2271 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_71_89_-0.607196827230214_6.18825468271457_1.63071475376328-3 chr5 138995456 138996433 + 1.63071475376328 NA promoter-TSS (NM_008808) promoter-TSS (NM_008808) -991 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_71_89_-0.607196827230214_6.18825468271457_1.63071475376328 chr10 39612818 39614075 + 1.63071475376328 NA intron (NM_134000, intron 1 of 8) intron (NM_134000, intron 1 of 8) 236 NR_152259 100504626 Mm.440236 NR_152259 Gm16364 Gm16365 predicted gene 16364 ncRNA common_peak1_71_89_-0.607196827230214_6.18825468271457_1.63071475376328 chr9 20520782 20521804 + 1.63071475376328 NA intron (NM_001135019, intron 1 of 8) CpG 126 NM_001135019 77519 Mm.431849 NM_001082485 ENSMUSG00000060510 Zfp266 5330440G10Rik|5730601F06Rik|AW552317 zinc finger protein 266 protein-coding common_peak1_108_59_0.571804289519927_6.19279274036848_1.63071475376327 chr19 53008650 53009912 + 1.63071475376327 NA intron (NM_133216, intron 8 of 20) intron (NM_133216, intron 8 of 20) 1475 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA common_peak2_129_73_0.521631748433554_6.47026923984573_1.62969718097463 chr12 108392767 108393638 + 1.62969718097463 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -17431 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_94_112_-0.538413588689407_6.55097216807048_1.62934253970067 chr1 161034656 161036115 + 1.62934253970067 NA promoter-TSS (NR_151478) promoter-TSS (NR_151478) 469 NR_153812 14455 Mm.270065 NR_002840 ENSMUSG00000053332 Gas5 Gas-5|Mir5117|Snhg2 growth arrest specific 5 ncRNA unique_peak1_43_18_0.931247889153475_4.71355145802032_1.62918185056051-3 chr8 61225983 61226475 + 1.62918185056051 NA exon (NM_021506, exon 2 of 12) exon (NM_021506, exon 2 of 12) 2058 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding unique_peak2_21_36_-1.02322298345865_4.69784187389963_1.62918185056051 chr19 3851177 3851589 + 1.62918185056051 NA promoter-TSS (NM_013490) promoter-TSS (NM_013490) -390 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_43_18_0.931247889153475_4.71355145802032_1.62918185056051 chr11 120549903 120550292 + 1.62918185056051 NA promoter-TSS (NM_001033231) promoter-TSS (NM_001033231) -370 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Mcrip1 Fam195b MAPK regulated corepressor interacting protein 1 protein-coding common_peak2_21_36_-1.02322298345865_4.69784187389963_1.62918185056051 chr13 104468543 104468843 + 1.62918185056051 NA intron (NR_136938, intron 23 of 26) intron (NR_136938, intron 23 of 26) 180858 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_21_36_-1.02322298345865_4.69784187389963_1.62918185056051-2 chr7 101343873 101344522 + 1.62918185056051 NA intron (NM_019990, intron 5 of 6) intron (NM_019990, intron 5 of 6) -3872 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_43_18_0.931247889153475_4.71355145802032_1.62918185056051-2 chr9 15044904 15045420 + 1.62918185056051 NA 5' UTR (NM_019482, exon 1 of 5) 5' UTR (NM_019482, exon 1 of 5) 316 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak1_43_18_0.931247889153475_4.71355145802032_1.62918185056051 chr1 182527795 182528003 + 1.62918185056051 NA Intergenic Intergenic -10289 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_21_36_-1.02322298345865_4.69784187389963_1.62918185056051 chr9 56106772 56106985 + 1.62918185056051 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 16902 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding unique_peak1_43_18_0.931247889153475_4.71355145802032_1.62918185056051-2 chr3 63295234 63296115 + 1.62918185056051 NA promoter-TSS (NM_008604) promoter-TSS (NM_008604) -198 NM_008604 17380 Mm.296022 NM_008604 ENSMUSG00000027820 Mme 6030454K05Rik|C85356|CALLA|CD10|NEP|SFE membrane metallo endopeptidase protein-coding unique_peak1_43_18_0.931247889153475_4.71355145802032_1.62918185056051 chr1 143739436 143739955 + 1.62918185056051 NA promoter-TSS (NM_023505) promoter-TSS (NM_023505) 80 NM_023505 69367 Mm.272727 NM_023505 ENSMUSG00000018196 Glrx2 1700010P22Rik|AI645710|Grx2 glutaredoxin 2 (thioltransferase) protein-coding common_peak1_679_634_-0.209344943862176_9.20594030972844_1.62836857143083 chr8 126849766 126853249 + 1.62836857143083 NA non-coding (NR_151740, exon 2 of 2) non-coding (NR_151740, exon 2 of 2) 2487 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_160_94_0.467601763466192_6.80365649006404_1.62827041427997 chr12 33180448 33181902 + 1.62827041427997 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 33489 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-78 chr4 152267482 152267729 + 1.62698961692433 NA intron (NM_133348, intron 8 of 8) intron (NM_133348, intron 8 of 8) -6757 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-33 chr14 25528690 25528881 + 1.62698961692433 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -5654 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-12 chr12 79945634 79945854 + 1.62698961692433 NA Intergenic Intergenic -9480 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-17 chr10 78780618 78781009 + 1.62698961692433 NA intron (NM_009200, intron 1 of 9) intron (NM_009200, intron 1 of 9) 317 NM_009200 20513 Mm.6257 NM_009200 ENSMUSG00000005357 Slc1a6 EAAT4 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-35 chr14 73254441 73254642 + 1.62698961692433 NA intron (NM_009029, intron 17 of 26) intron (NM_009029, intron 17 of 26) 16650 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-9 chr11 17000581 17000840 + 1.62698961692433 NA intron (NM_019549, intron 1 of 9) intron (NM_019549, intron 1 of 9) 8008 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-27 chr13 24832632 24832830 + 1.62698961692433 NA intron (NM_019551, intron 2 of 6) intron (NM_019551, intron 2 of 6) 1072 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-68 chr5 64393323 64393547 + 1.62698961692433 NA Intergenic Intergenic 74507 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-73 chr3 122203833 122204069 + 1.62698961692433 NA Intergenic Intergenic -41606 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-32 chr13 73431988 73432272 + 1.62698961692433 NA Intergenic Intergenic -35253 NM_145376 210992 Mm.284649 NM_145376 ENSMUSG00000021608 Lpcat1 2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11 lysophosphatidylcholine acyltransferase 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-48 chr9 113019783 113020069 + 1.62698961692433 NA Intergenic Intergenic 567226 NR_040760 102688 Mm.394901 NR_040760 ENSMUSG00000109890 AU023762 - expressed sequence AU023762 ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-9 chr1 181013788 181014069 + 1.62698961692433 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 3641 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-74 chr4 32509090 32509295 + 1.62698961692433 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 62470 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-86 chr8 47988096 47988450 + 1.62698961692433 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 2278 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-19 chr12 80364012 80364283 + 1.62698961692433 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 27530 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-43 chr15 77804497 77804742 + 1.62698961692433 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 37556 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-92 chr7 97247416 97247670 + 1.62698961692433 NA intron (NM_001162477, intron 2 of 9) intron (NM_001162477, intron 2 of 9) 78421 NM_001177412 244144 Mm.297541 NM_001177412 ENSMUSG00000035713 Usp35 Gm1088|Gm493 ubiquitin specific peptidase 35 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-38 chr15 11166967 11167175 + 1.62698961692433 NA intron (NM_175501, intron 3 of 23) intron (NM_175501, intron 3 of 23) 102298 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-71 chr5 124202465 124202677 + 1.62698961692433 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -15389 NM_001289472 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-59 chr19 42238280 42238503 + 1.62698961692433 NA Intergenic Intergenic -9187 NM_001141983 71146 Mm.329851 NM_027694 ENSMUSG00000042532 Golga7b 4933417O08Rik|AI839934 golgi autoantigen, golgin subfamily a, 7B protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-54 chr2 141279699 141279948 + 1.62698961692433 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -608347 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-38 chr15 25559401 25559599 + 1.62698961692433 NA Intergenic Intergenic -63050 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-22 chr11 72473086 72473330 + 1.62698961692433 NA intron (NM_153060, intron 2 of 12) intron (NM_153060, intron 2 of 12) 1819 NM_001276383 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-35 chr6 34602986 34603280 + 1.62698961692433 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 4629 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-47 chr9 42123781 42124007 + 1.62698961692433 NA exon (NM_011436, exon 1 of 48) exon (NM_011436, exon 1 of 48) 403 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-29 chr4 121024302 121024603 + 1.62698961692433 NA Intergenic Intergenic -7205 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-83 chr5 100845805 100845998 + 1.62698961692433 NA promoter-TSS (NM_172715) promoter-TSS (NM_172715) -328 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-63 chr2 91298996 91299224 + 1.62698961692433 NA intron (NM_175123, intron 4 of 8) intron (NM_175123, intron 4 of 8) 33995 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-42 chr15 101139617 101139866 + 1.62698961692433 NA intron (NM_001277255, intron 10 of 11) intron (NM_001277255, intron 10 of 11) 11219 NM_001277257 11482 Mm.279542 NM_009612 ENSMUSG00000000530 Acvrl1 AI115505|AI427544|Acvrlk1|Alk1 activin A receptor, type II-like 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-31 chr13 60177930 60178147 + 1.62698961692433 NA promoter-TSS (NM_008086) promoter-TSS (NM_008086) -503 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-56 chr18 67946727 67947015 + 1.62698961692433 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 13698 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-46 chr18 70606369 70606599 + 1.62698961692433 NA intron (NM_010773, intron 3 of 6) intron (NM_010773, intron 3 of 6) 38192 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-75 chr6 112242157 112242455 + 1.62698961692433 NA Intergenic Intergenic -31452 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-88 chr6 91160087 91160288 + 1.62698961692433 NA intron (NM_144919, intron 3 of 9) intron (NM_144919, intron 3 of 9) 3372 NM_144919 232232 Mm.206218 NM_144919 ENSMUSG00000034245 Hdac11 - histone deacetylase 11 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-77 chr7 25248484 25248673 + 1.62698961692433 NA intron (NM_010155, intron 1 of 3) intron (NM_010155, intron 1 of 3) 2180 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-3 chr1 71647899 71648111 + 1.62698961692433 NA intron (NM_001276412, intron 5 of 44) intron (NM_001276412, intron 5 of 44) 5229 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-18 chr12 26009013 26009210 + 1.62698961692433 NA Intergenic Intergenic 201394 NR_131149 629481 Mm.390460 NR_131149 ENSMUSG00000113550 Gm29687 - predicted gene, 29687 ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-52 chr17 32388561 32388808 + 1.62698961692433 NA promoter-TSS (NM_212438) promoter-TSS (NM_212438) 266 NM_011717 22404 Mm.274948 NM_011717 ENSMUSG00000024050 Wiz - widely-interspaced zinc finger motifs protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-42 chr15 62093027 62093216 + 1.62698961692433 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 53864 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-5 chr1 131154574 131154949 + 1.62698961692433 NA intron (NM_010709, intron 2 of 14) intron (NM_010709, intron 2 of 14) 1554 NM_010709 16865 Mm.276294 NM_010709 ENSMUSG00000026427 Eif2d D1Ertd5e|Lgtn eukaryotic translation initiation factor 2D protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-87 chr5 151167817 151168106 + 1.62698961692433 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 22232 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-61 chr2 24928423 24928658 + 1.62698961692433 NA intron (NM_178408, intron 1 of 7) intron (NM_178408, intron 1 of 7) 6741 NR_027876 215705 Mm.45275 NM_178408 ENSMUSG00000026972 Arrdc1 AI957342|BC004091 arrestin domain containing 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-87 chr8 68116446 68116698 + 1.62698961692433 NA Intergenic Intergenic -141998 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-51 chr2 71873355 71873563 + 1.62698961692433 NA exon (NM_172665, exon 1 of 11) exon (NM_172665, exon 1 of 11) 235 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-95 chr7 144244536 144244743 + 1.62698961692433 NA intron (NM_001113373, intron 4 of 15) intron (NM_001113373, intron 4 of 15) -39746 NM_001081370 210274 Mm.483624 NM_001081370 ENSMUSG00000037541 Shank2 ProSAP1|mKIAA1022 SH3 and multiple ankyrin repeat domains 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-59 chr4 107606713 107606929 + 1.62698961692433 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 76768 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding common_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-2 chr7 112868838 112869039 + 1.62698961692433 NA intron (NM_001166584, intron 10 of 13) intron (NM_001166584, intron 10 of 13) -85024 NM_175279 78748 Mm.349943 NM_175279 ENSMUSG00000098132 Rassf10 4632411J06Rik Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-11 chr11 54880566 54880791 + 1.62698961692433 NA Intergenic Intergenic 14295 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-45 chr18 32145642 32145836 + 1.62698961692433 NA Intergenic Intergenic -6169 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-6 chr10 68204634 68204967 + 1.62698961692433 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 73926 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-88 chr8 109916976 109917197 + 1.62698961692433 NA intron (NM_001122594, intron 9 of 18) PB1D10|SINE|Alu 45119 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-61 chr4 141420611 141420829 + 1.62698961692433 NA promoter-TSS (NM_013868) promoter-TSS (NM_013868) -59 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-12 chr1 193300431 193300718 + 1.62698961692433 NA Intergenic Intergenic -1420 NM_008484 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-17 chr13 28673889 28674130 + 1.62698961692433 NA intron (NR_045054, intron 3 of 7) intron (NR_045054, intron 3 of 7) 36864 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-39 chr7 70356960 70357188 + 1.62698961692433 NA intron (NM_183261, intron 2 of 2) intron (NM_183261, intron 2 of 2) 3519 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-2 chr1 66861772 66862102 + 1.62698961692433 NA intron (NM_007381, intron 1 of 10) intron (NM_007381, intron 1 of 10) 1372 NM_007381 11363 Mm.2445 NM_007381 ENSMUSG00000026003 Acadl AA960361|AU018452|C79855|LCAD acyl-Coenzyme A dehydrogenase, long-chain protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-103 chr9 58265743 58265993 + 1.62698961692433 NA Intergenic Intergenic 12704 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-56 chr3 65353572 65353767 + 1.62698961692433 NA intron (NM_001357358, intron 8 of 13) intron (NM_001357358, intron 8 of 13) -4240 NR_040390 319798 Mm.445698 NR_040390 A730090N16Rik - RIKEN cDNA A730090N16 gene ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-36 chr6 114726073 114726282 + 1.62698961692433 NA intron (NM_001253718, intron 18 of 19) intron (NM_001253718, intron 18 of 19) 83080 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-20 chr12 80813715 80813916 + 1.62698961692433 NA intron (NM_001242419, intron 1 of 6) intron (NM_001242419, intron 1 of 6) 23283 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-3 chr7 30955625 30955873 + 1.62698961692433 NA intron (NM_011680, intron 4 of 9) intron (NM_011680, intron 4 of 9) 1054 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-45 chr8 106190909 106191186 + 1.62698961692433 NA intron (NM_001357381, intron 3 of 9) intron (NM_001357381, intron 3 of 9) 19886 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-3 chr7 97069978 97070194 + 1.62698961692433 NA Intergenic Intergenic -11665 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-62 chr4 142084006 142084235 + 1.62698961692433 NA promoter-TSS (NR_027137) promoter-TSS (NR_027137) -178 NR_027137 100038693 Mm.402714 NR_027137 ENSMUSG00000073728 Tmem51os1 Gm10565|Tmem51as1 Tmem51 opposite strand 1 ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-74 chr6 100711786 100712180 + 1.62698961692433 NA intron (NM_198612, intron 1 of 6) B1_Mur1|SINE|Alu 7249 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-71 chr3 104358953 104359205 + 1.62698961692433 NA Intergenic Intergenic -138673 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-65 chr5 24825376 24825578 + 1.62698961692433 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 16884 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-25 chr12 112607410 112607640 + 1.62698961692433 NA exon (NM_198411, exon 13 of 23) exon (NM_198411, exon 13 of 23) -12522 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-42 chr8 31827962 31828184 + 1.62698961692433 NA intron (NM_178591, intron 4 of 8) intron (NM_178591, intron 4 of 8) 90130 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433 chr1 40381621 40381857 + 1.62698961692433 NA Intergenic Intergenic -47831 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-20 chr17 74338274 74338508 + 1.62698961692433 NA promoter-TSS (NM_001162870) promoter-TSS (NM_001162870) -596 NM_001357738 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-32 chr5 13377746 13378010 + 1.62698961692433 NA Intergenic Intergenic -18906 NM_001243072 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-6 chr1 135635233 135635637 + 1.62698961692433 NA Intergenic Intergenic 37659 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-84 chr5 125106587 125106831 + 1.62698961692433 NA intron (NM_011424, intron 5 of 46) (CACCAT)n|Simple_repeat|Simple_repeat 72505 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-19 chr11 7423352 7423541 + 1.62698961692433 NA Intergenic Intergenic -209523 NM_008343 16009 Mm.29254 NM_008343 ENSMUSG00000020427 Igfbp3 AI649005|IGFBP-3|IGgfbp3 insulin-like growth factor binding protein 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-36 chr14 122902677 122902904 + 1.62698961692433 NA intron (NM_145466, intron 1 of 2) intron (NM_145466, intron 1 of 2) -10240 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-2 chr1 62724237 62724516 + 1.62698961692433 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 21059 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-44 chr17 47452709 47452965 + 1.62698961692433 NA intron (NM_145489, intron 2 of 4) intron (NM_145489, intron 2 of 4) -15462 NM_029296 75462 Mm.46129 NM_029296 ENSMUSG00000047150 1700001C19Rik - RIKEN cDNA 1700001C19 gene protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-78 chr7 28941609 28941833 + 1.62698961692433 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 20611 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-84 chr7 128555966 128556178 + 1.62698961692433 NA Intergenic Intergenic 32489 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-20 chr11 52341460 52341724 + 1.62698961692433 NA Intergenic Intergenic -19270 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-10 chr11 50206986 50207267 + 1.62698961692433 NA intron (NM_001290769, intron 4 of 7) intron (NM_001290769, intron 4 of 7) 3694 NM_001290769 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-4 chr10 8870940 8871133 + 1.62698961692433 NA intron (NM_175155, intron 1 of 19) intron (NM_175155, intron 1 of 19) 15034 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-33 chr13 91910585 91910800 + 1.62698961692433 NA intron (NM_009027, intron 6 of 14) intron (NM_009027, intron 6 of 14) -33807 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-77 chr4 126109012 126109231 + 1.62698961692433 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 5164 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-68 chr2 167578615 167578968 + 1.62698961692433 NA Intergenic Intergenic 40596 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-23 chr19 8725327 8725609 + 1.62698961692433 NA promoter-TSS (NR_004445) promoter-TSS (NR_004445) -398 NR_004445 100127111 Mm.292489 NR_004445 ENSMUSG00000065087 Snord22 Rnu22|U22 small nucleolar RNA, C/D box 22 snoRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-7 chr1 153048352 153048650 + 1.62698961692433 NA intron (NM_175460, intron 1 of 10) intron (NM_175460, intron 1 of 10) 93400 NM_175460 226518 Mm.40548 NM_175460 ENSMUSG00000042751 Nmnat2 AI843915|D030041I09Rik|PNAT1|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-80 chr7 78915152 78915388 + 1.62698961692433 NA intron (NM_001113527, intron 1 of 2) intron (NM_001113527, intron 1 of 2) 1035 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-69 chr5 72820476 72820691 + 1.62698961692433 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) 47865 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-73 chr6 91579110 91579346 + 1.62698961692433 NA Intergenic Intergenic 63193 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-90 chrX 101369353 101369628 + 1.62698961692433 NA Intergenic Intergenic -6886 NM_001302496 14618 Mm.21198 NM_008124 ENSMUSG00000047797 Gjb1 Cnx32|Cx32|connexin-32 gap junction protein, beta 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-60 chr4 122955702 122956044 + 1.62698961692433 NA intron (NM_029662, intron 3 of 13) intron (NM_029662, intron 3 of 13) 5315 NM_029662 76574 Mm.331842 NM_029662 ENSMUSG00000028655 Mfsd2a 1700018O18Rik|Mfsd2|NLS1 major facilitator superfamily domain containing 2A protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-14 chr12 84869929 84870221 + 1.62698961692433 NA intron (NM_013589, intron 1 of 34) intron (NM_013589, intron 1 of 34) -5727 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-21 chr12 99052991 99053388 + 1.62698961692433 NA Intergenic Intergenic 109619 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-54 chr17 65698336 65698557 + 1.62698961692433 NA intron (NM_133685, intron 3 of 6) intron (NM_133685, intron 3 of 6) -56242 NM_001146002 213272 Mm.255732 NM_153519 ENSMUSG00000050612 Txndc2 AU021712|Sptrx-1|Sptrx1|Trx4 thioredoxin domain containing 2 (spermatozoa) protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-7 chr10 71217964 71218261 + 1.62698961692433 NA Intergenic Intergenic 16367 NR_131003 78638 Mm.71171 NR_131003 ENSMUSG00000112028 1700113B09Rik - RIKEN cDNA 1700113B09 gene ncRNA common_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-2 chr3 9500219 9500451 + 1.62698961692433 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 97257 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-55 chr18 54913387 54913649 + 1.62698961692433 NA intron (NM_001360787, intron 2 of 8) intron (NM_001360787, intron 2 of 8) 76662 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-34 chr14 24492063 24492380 + 1.62698961692433 NA intron (NM_207634, intron 3 of 4) intron (NM_207634, intron 3 of 4) 1468 NM_001360586 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-85 chr8 31721089 31721301 + 1.62698961692433 NA Intergenic MIRc|SINE|MIR 197008 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-13 chr11 83882744 83883034 + 1.62698961692433 NA intron (NM_009330, intron 5 of 8) intron (NM_009330, intron 5 of 8) 29929 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433 chr1 34043499 34043749 + 1.62698961692433 NA intron (NM_134448, intron 1 of 97) intron (NM_134448, intron 1 of 97) 31799 NM_134448 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-28 chr2 153442893 153443149 + 1.62698961692433 NA intron (NM_001134300, intron 4 of 10) intron (NM_001134300, intron 4 of 10) 1458 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-11 chr12 69758366 69758602 + 1.62698961692433 NA intron (NM_183294, intron 4 of 9) intron (NM_183294, intron 4 of 9) 5460 NR_030450 751538 NR_030450 ENSMUSG00000076065 Mir681 Mirn681|mmu-mir-681 microRNA 681 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-33 chr5 64198752 64198981 + 1.62698961692433 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -31491 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-75 chr4 84068501 84068725 + 1.62698961692433 NA Intergenic Intergenic -23734 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-3 chr1 72400990 72401219 + 1.62698961692433 NA Intergenic Intergenic 93683 NM_001357519 22596 Mm.246952 NM_009533 ENSMUSG00000026187 Xrcc5 AI314015|CTC85|CTCBF|Ku80|Ku86 X-ray repair complementing defective repair in Chinese hamster cells 5 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-34 chr14 54231864 54232134 + 1.62698961692433 NA Intergenic Intergenic 21930 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-28 chr12 91748635 91748829 + 1.62698961692433 NA intron (NM_175367, intron 1 of 6) intron (NM_175367, intron 1 of 6) 37704 NM_175367 108800 Mm.23125 NM_175367 ENSMUSG00000020961 Ston2 4933401N24Rik|AI425999|AW544599 stonin 2 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-34 chr5 93106984 93107200 + 1.62698961692433 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 13676 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-40 chr15 78482271 78482499 + 1.62698961692433 NA intron (NM_008368, intron 9 of 9) intron (NM_008368, intron 9 of 9) 12681 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-98 chr8 25085014 25085265 + 1.62698961692433 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 16672 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-40 chr15 38451178 38451378 + 1.62698961692433 NA Intergenic MIRb|SINE|MIR 39269 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-41 chr7 126377218 126377451 + 1.62698961692433 NA non-coding (NR_045537, exon 1 of 13) non-coding (NR_045537, exon 1 of 13) 600 NM_023712 73658 Mm.11112 NM_023712 ENSMUSG00000030741 Spns1 2210013K02Rik|Spin1|Spinl spinster homolog 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-26 chr13 5375575 5375771 + 1.62698961692433 NA Intergenic Intergenic 482419 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-43 chr17 6748183 6748688 + 1.62698961692433 NA intron (NM_009510, intron 6 of 12) intron (NM_009510, intron 6 of 12) 34345 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-60 chr2 24469859 24470061 + 1.62698961692433 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 5639 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-18 chr13 42305431 42305632 + 1.62698961692433 NA intron (NM_010104, intron 4 of 4) intron (NM_010104, intron 4 of 4) 4055 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-44 chr15 90343559 90343889 + 1.62698961692433 NA Intergenic Intergenic -9986 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-9 chr11 120985031 120985248 + 1.62698961692433 NA intron (NM_027874, intron 1 of 9) intron (NM_027874, intron 1 of 9) 6194 NM_139059 104318 Mm.216227 NM_027874 ENSMUSG00000025162 Csnk1d 1200006A05Rik|AA409348|D930010H05Rik casein kinase 1, delta protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-14 chr10 68089138 68089389 + 1.62698961692433 NA Intergenic Intergenic 109693 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-8 chr1 170472749 170472986 + 1.62698961692433 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 84243 NM_027528 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-53 chr2 125217044 125217233 + 1.62698961692433 NA intron (NM_001079690, intron 22 of 27) intron (NM_001079690, intron 22 of 27) -30110 NM_001159646 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-97 chr8 24566464 24566667 + 1.62698961692433 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 9768 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-39 chr15 77919962 77920150 + 1.62698961692433 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 8938 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-25 chr11 113028629 113029034 + 1.62698961692433 NA Intergenic Intergenic 173007 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-31 chr13 63185099 63185308 + 1.62698961692433 NA intron (NM_001289926, intron 7 of 15) intron (NM_001289926, intron 7 of 15) -54826 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-30 chr4 139576497 139576811 + 1.62698961692433 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 1934 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-58 chr3 101076408 101076608 + 1.62698961692433 NA intron (NM_011197, intron 3 of 8) intron (NM_011197, intron 3 of 8) 33658 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-86 chr5 142812494 142812689 + 1.62698961692433 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 4796 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-50 chrX 95712156 95712367 + 1.62698961692433 NA intron (NM_001034907, intron 1 of 8) intron (NM_001034907, intron 1 of 8) 583 NM_001034907 547176 Mm.302708 NM_001034907 ENSMUSG00000035045 Zc3h12b A130028J20Rik|CXorf32|Gm373 zinc finger CCCH-type containing 12B protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-94 chr7 139818415 139818623 + 1.62698961692433 NA Intergenic Intergenic -15655 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-10 chr1 183787939 183788263 + 1.62698961692433 NA intron (NR_151520, intron 2 of 2) intron (NR_151520, intron 2 of 2) 39124 NR_151520 102637191 Mm.417076 NR_151520 ENSMUSG00000103305 Gm34068 - predicted gene, 34068 ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-50 chr2 69898106 69898340 + 1.62698961692433 NA intron (NM_177783, intron 1 of 38) intron (NM_177783, intron 1 of 38) 977 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding common_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-3 chr8 45410857 45411052 + 1.62698961692433 NA promoter-TSS (NM_126166) promoter-TSS (NM_126166) -335 NM_126166 142980 Mm.33874 NM_126166 ENSMUSG00000031639 Tlr3 AI957183 toll-like receptor 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-76 chr6 121089078 121089364 + 1.62698961692433 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -7594 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-105 chr9 107713337 107713800 + 1.62698961692433 NA Intergenic Intergenic -3093 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-12 chr11 78525130 78525430 + 1.62698961692433 NA 3' UTR (NM_001159392, exon 7 of 7) 3' UTR (NM_001159392, exon 7 of 7) 10980 NM_001159392 21927 Mm.386774 NM_009395 ENSMUSG00000017615 Tnfaip1 Bacurd2|Edp-1|Edp1|Tnfip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-2 chr1 78907747 78907937 + 1.62698961692433 NA intron (NR_151519, intron 3 of 3) intron (NR_151519, intron 3 of 3) 90931 NM_021342 57814 Mm.24386 NM_021342 ENSMUSG00000047330 Kcne4 AW487937|MiRP3 potassium voltage-gated channel, Isk-related subfamily, gene 4 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-82 chr7 100942938 100943150 + 1.62698961692433 NA intron (NM_183168, intron 1 of 2) intron (NM_183168, intron 1 of 2) -10883 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433 chr12 27494517 27494827 + 1.62698961692433 NA Intergenic Intergenic -151954 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-16 chr11 101301356 101301624 + 1.62698961692433 NA intron (NM_001359821, intron 2 of 3) PB1D7|SINE|Alu 796 NM_019584 56208 Mm.178947 NM_019584 ENSMUSG00000035086 Becn1 Atg6 beclin 1, autophagy related protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-67 chr2 167549040 167549292 + 1.62698961692433 NA Intergenic Intergenic 10971 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-4 chr1 72582811 72583033 + 1.62698961692433 NA promoter-TSS (NM_018817) promoter-TSS (NM_018817) -329 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-51 chr17 25405480 25405809 + 1.62698961692433 NA intron (NM_001163691, intron 2 of 34) intron (NM_001163691, intron 2 of 34) 28139 NM_021415 58226 Mm.268378 NM_021415 ENSMUSG00000024112 Cacna1h Cav3.2|MNCb-1209|alpha13.2 calcium channel, voltage-dependent, T type, alpha 1H subunit protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-16 chr12 111558867 111559172 + 1.62698961692433 NA Intergenic Intergenic 15383 NR_045295 100504687 Mm.26072 NR_045295 ENSMUSG00000096995 2810029C07Rik AU017849 RIKEN cDNA 2810029C07 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-29 chr12 100109726 100109954 + 1.62698961692433 NA Intergenic Intergenic -2491 NM_008947 19179 Mm.157105 NM_008947 ENSMUSG00000021178 Psmc1 AI325227|P26s4|Rpt2/S4|S4|rpt2 protease (prosome, macropain) 26S subunit, ATPase 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-38 chr7 49550305 49550568 + 1.62698961692433 NA intron (NM_175272, intron 14 of 37) intron (NM_175272, intron 14 of 37) 86399 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-100 chr8 54615151 54615410 + 1.62698961692433 NA Intergenic Intergenic 14499 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-7 chr11 94993303 94993537 + 1.62698961692433 NA intron (NM_172261, intron 1 of 9) intron (NM_172261, intron 1 of 9) 2208 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-5 chr10 61146385 61146641 + 1.62698961692433 NA intron (NM_001316674, intron 1 of 14) CpG 1171 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-3 chr1 89114957 89115180 + 1.62698961692433 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 44653 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-13 chr10 8771472 8771787 + 1.62698961692433 NA intron (NM_175155, intron 8 of 19) intron (NM_175155, intron 8 of 19) 114441 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-99 chr8 36741265 36741487 + 1.62698961692433 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -8322 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-44 chr8 89037033 89037344 + 1.62698961692433 NA intron (NM_021390, intron 2 of 3) intron (NM_021390, intron 2 of 3) 6974 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-63 chr4 150717568 150717930 + 1.62698961692433 NA Intergenic Intergenic -65575 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-23 chr12 100778430 100778655 + 1.62698961692433 NA promoter-TSS (NM_001361020) promoter-TSS (NM_001361020) -515 NM_001361023 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-15 chr11 88472061 88472325 + 1.62698961692433 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 119420 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-47 chr16 11015700 11015894 + 1.62698961692433 NA TTS (NR_040518) TTS (NR_040518) 6899 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-19 chr13 110920817 110921019 + 1.62698961692433 NA Intergenic Intergenic -17072 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-16 chr10 77128919 77129121 + 1.62698961692433 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -15315 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-26 chr2 117877793 117878034 + 1.62698961692433 NA non-coding (NR_040631, exon 3 of 6) non-coding (NR_040631, exon 3 of 6) 55985 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-66 chr2 167060444 167060724 + 1.62698961692433 NA intron (NM_001033196, intron 1 of 13) intron (NM_001033196, intron 1 of 13) -2350 NR_138563 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-31 chr4 148066628 148066827 + 1.62698961692433 NA Intergenic Intergenic 21337 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-26 chr11 117258770 117258984 + 1.62698961692433 NA intron (NM_001113486, intron 2 of 11) PB1D11|SINE|Alu -7369 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-32 chr14 25513586 25513881 + 1.62698961692433 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -20706 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-45 chr15 99350239 99350511 + 1.62698961692433 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 20107 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-13 chr12 84783986 84784280 + 1.62698961692433 NA 3' UTR (NM_013589, exon 35 of 35) 3' UTR (NM_013589, exon 35 of 35) 10863 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-25 chr2 84727502 84727701 + 1.62698961692433 NA promoter-TSS (NM_133840) promoter-TSS (NM_133840) -333 NM_133840 98985 Mm.21583 NM_133840 ENSMUSG00000027079 Clp1 AI462438|Heab CLP1, cleavage and polyadenylation factor I subunit protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-67 chr5 36085178 36085460 + 1.62698961692433 NA intron (NM_030889, intron 3 of 26) intron (NM_030889, intron 3 of 26) -118702 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-49 chr16 13407389 13407626 + 1.62698961692433 NA intron (NM_153588, intron 13 of 14) intron (NM_153588, intron 13 of 14) -42016 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-72 chr3 122011154 122011487 + 1.62698961692433 NA exon (NM_172525, exon 21 of 23) exon (NM_172525, exon 21 of 23) -33140 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-24 chr12 102597736 102597956 + 1.62698961692433 NA intron (NM_172584, intron 4 of 9) intron (NM_172584, intron 4 of 9) 42905 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-49 chrX 8252057 8252318 + 1.62698961692433 NA 5' UTR (NM_001290430, exon 1 of 13) 5' UTR (NM_001290430, exon 1 of 13) 219 NM_133991 54632 Mm.327529 NM_133991 ENSMUSG00000031171 Ftsj1 AI931847|Ftsj|Ftsjl|Sfc12 FtsJ RNA methyltransferase homolog 1 (E. coli) protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-8 chr11 96989841 96990067 + 1.62698961692433 NA Intergenic Intergenic -12266 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-14 chr11 88366121 88366451 + 1.62698961692433 NA intron (NM_054043, intron 11 of 13) intron (NM_054043, intron 11 of 13) 13513 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-46 chr16 6841555 6841818 + 1.62698961692433 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -197684 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-93 chr7 132572434 132572631 + 1.62698961692433 NA intron (NM_016978, intron 1 of 9) intron (NM_016978, intron 1 of 9) 3866 NM_016978 18242 Mm.13694 NM_016978 ENSMUSG00000030934 Oat AI194874|rhg ornithine aminotransferase protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-37 chr15 6568434 6568683 + 1.62698961692433 NA Intergenic Intergenic -11289 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Fyb1|Slap130|p120/130|p120/p130 FYN binding protein protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-23 chr11 101713488 101713772 + 1.62698961692433 NA Intergenic Intergenic -19326 NM_144831 217207 Mm.28186 NM_144831 ENSMUSG00000034931 Dhx8 Ddx8|mDEAH6|mKIAA4096 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-69 chr3 65949430 65949687 + 1.62698961692433 NA intron (NM_019937, intron 5 of 10) intron (NM_019937, intron 5 of 10) 8691 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-39 chr15 32257933 32258130 + 1.62698961692433 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 13218 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-55 chr3 60438216 60438501 + 1.62698961692433 NA Intergenic Intergenic -34472 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-49 chr2 60644746 60645041 + 1.62698961692433 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 28800 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-104 chr9 59653028 59653236 + 1.62698961692433 NA Intergenic Intergenic -3236 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-72 chr6 50359263 50359502 + 1.62698961692433 NA intron (NM_027881, intron 2 of 21) intron (NM_027881, intron 2 of 21) 23455 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-83 chr7 109610006 109610210 + 1.62698961692433 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 6460 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-36 chr14 79486500 79486703 + 1.62698961692433 NA intron (NM_007920, intron 1 of 8) intron (NM_007920, intron 1 of 8) -5333 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-57 chr18 75694992 75695265 + 1.62698961692433 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 2568 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-62 chr2 51143287 51143507 + 1.62698961692433 NA intron (NM_028810, intron 2 of 4) intron (NM_028810, intron 2 of 4) 5714 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-22 chr18 32395414 32395639 + 1.62698961692433 NA intron (NM_001360876, intron 1 of 17) intron (NM_001360876, intron 1 of 17) -17242 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-80 chr5 31611401 31611691 + 1.62698961692433 NA Intergenic Intergenic -2405 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433 chr10 14528262 14528479 + 1.62698961692433 NA intron (NM_001002268, intron 2 of 24) intron (NM_001002268, intron 2 of 24) 16666 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-37 chr15 11890496 11890738 + 1.62698961692433 NA intron (NM_001039181, intron 2 of 7) intron (NM_001039181, intron 2 of 7) 15057 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-89 chr6 93654155 93654365 + 1.62698961692433 NA Intergenic Intergenic 258703 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-48 chr2 24457540 24457767 + 1.62698961692433 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 17946 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-27 chr2 153347424 153347677 + 1.62698961692433 NA intron (NM_001039939, intron 1 of 11) intron (NM_001039939, intron 1 of 11) 1411 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-2 chr13 41709871 41710066 + 1.62698961692433 NA Intergenic Intergenic 103752 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-53 chr17 34894733 34894991 + 1.62698961692433 NA intron (NM_198886, intron 1 of 1) CpG 303 NM_198886 193736 Mm.161119 NM_198886 ENSMUSG00000049823 Zbtb12 BC020447|Bat-9|Bat9|G10|NG35 zinc finger and BTB domain containing 12 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-22 chr12 100336356 100336637 + 1.62698961692433 NA intron (NM_001033213, intron 17 of 19) intron (NM_001033213, intron 17 of 19) 59887 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-5 chr1 183142041 183142247 + 1.62698961692433 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 5413 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-35 chr14 75283925 75284120 + 1.62698961692433 NA promoter-TSS (NM_026083) promoter-TSS (NM_026083) -344 NM_001359875 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-10 chr12 8816068 8816377 + 1.62698961692433 NA Intergenic Intergenic 44826 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433 chr1 30871926 30872155 + 1.62698961692433 NA Intergenic Intergenic -8784 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-66 chr5 33628330 33628549 + 1.62698961692433 NA promoter-TSS (NM_001359461) promoter-TSS (NM_001359461) -928 NM_001359461 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-48 chr16 11826053 11826397 + 1.62698961692433 NA intron (NM_146067, intron 3 of 3) intron (NM_146067, intron 3 of 3) 46523 NR_126430 73761 Mm.39183 NR_126430 4833415N18Rik - RIKEN cDNA 4833415N18 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-58 chr19 7161734 7161983 + 1.62698961692433 NA intron (NM_134147, intron 3 of 10) intron (NM_134147, intron 3 of 10) 44426 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-27 chr12 8813868 8814118 + 1.62698961692433 NA Intergenic Intergenic 42597 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-41 chr15 59412006 59412207 + 1.62698961692433 NA intron (NM_001164604, intron 2 of 4) intron (NM_001164604, intron 2 of 4) 37908 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-89 chr8 120113532 120113757 + 1.62698961692433 NA promoter-TSS (NM_001163762) promoter-TSS (NM_001163762) -508 NM_001163762 234797 Mm.101958 NM_172286 ENSMUSG00000031824 6430548M08Rik AW049007|Kiaa0513|mKIAA0513 RIKEN cDNA 6430548M08 gene protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-40 chr7 112831764 112831978 + 1.62698961692433 NA intron (NM_001166584, intron 2 of 13) intron (NM_001166584, intron 2 of 13) 72487 NM_001166585 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-65 chr2 132270610 132270864 + 1.62698961692433 NA intron (NM_001291040, intron 1 of 3) intron (NM_001291040, intron 1 of 3) 7589 NM_138651 110911 Mm.284503 NM_138651 ENSMUSG00000058793 Cds2 5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-41 chr15 79049334 79049655 + 1.62698961692433 NA Intergenic Intergenic 7609 NM_015738 14429 Mm.390805 NM_015738 ENSMUSG00000114755 Galr3 Galnr3 galanin receptor 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-17 chr11 103035560 103035761 + 1.62698961692433 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 7117 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-90 chr7 88463414 88463788 + 1.62698961692433 NA intron (NM_028238, intron 2 of 2) intron (NM_028238, intron 2 of 2) 33328 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-96 chr8 11457827 11458019 + 1.62698961692433 NA intron (NM_011227, intron 1 of 1) intron (NM_011227, intron 1 of 1) -20006 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-52 chr2 91361437 91361629 + 1.62698961692433 NA intron (NM_175123, intron 3 of 8) intron (NM_175123, intron 3 of 8) 83181 NM_001311144 228356 Mm.386861 NM_175123 ENSMUSG00000040591 1110051M20Rik AI586322 RIKEN cDNA 1110051M20 gene protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-30 chr13 53583980 53584209 + 1.62698961692433 NA Intergenic Intergenic 55107 NR_131079 77398 Mm.174307 NR_131079 ENSMUSG00000113599 9530014B07Rik - RIKEN cDNA 9530014B07 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-24 chr11 107027611 107027831 + 1.62698961692433 NA promoter-TSS (NM_001163473) promoter-TSS (NM_001163473) -502 NM_001163473 69066 Mm.40679 NM_001163473 ENSMUSG00000078607 1810010H24Rik - RIKEN cDNA 1810010H24 gene protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-28 chr13 31567545 31567752 + 1.62698961692433 NA intron (NR_029439, intron 3 of 5) intron (NR_029439, intron 3 of 5) 9478 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-15 chr10 77082945 77083170 + 1.62698961692433 NA intron (NM_001109991, intron 5 of 40) intron (NM_001109991, intron 5 of 40) 30648 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-37 chr7 28811958 28812178 + 1.62698961692433 NA intron (NM_177301, intron 1 of 12) intron (NM_177301, intron 1 of 12) 1178 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-81 chr5 64580331 64580524 + 1.62698961692433 NA Intergenic Intergenic 30272 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-70 chr3 88172205 88172485 + 1.62698961692433 NA TTS (NM_133665) TTS (NM_133665) 5440 NR_045997 76642 Mm.424420 NR_045997 ENSMUSG00000096935 1700113A16Rik 2210408E11Rik|AA408983 RIKEN cDNA 1700113A16 gene ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-11 chr1 192739785 192740015 + 1.62698961692433 NA intron (NM_144881, intron 4 of 11) intron (NM_144881, intron 4 of 11) 31319 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-21 chr17 75203562 75203805 + 1.62698961692433 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 24902 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-64 chr5 24453310 24453508 + 1.62698961692433 NA intron (NM_001359881, intron 1 of 15) intron (NM_001359881, intron 1 of 15) 1232 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-6 chr11 4269254 4269490 + 1.62698961692433 NA 3' UTR (NM_008501, exon 4 of 4) 3' UTR (NM_008501, exon 4 of 4) 2576 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-43 chr8 36705597 36705878 + 1.62698961692433 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 27317 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-102 chr8 128418279 128418524 + 1.62698961692433 NA intron (NM_001358959, intron 2 of 16) intron (NM_001358959, intron 2 of 16) 59160 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-18 chr10 107912187 107912415 + 1.62698961692433 NA promoter-TSS (NM_001177567) promoter-TSS (NM_001177567) -167 NM_001177567 628870 Mm.336090 NM_001177567 ENSMUSG00000091455 Otogl EG628870|Gm6924 otogelin-like protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-64 chr2 128433257 128433480 + 1.62698961692433 NA Intergenic Intergenic -4017 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-50 chr16 52094419 52094636 + 1.62698961692433 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 62978 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-57 chr3 85992121 85992446 + 1.62698961692433 NA Intergenic Intergenic 10208 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-21 chr11 59393512 59393713 + 1.62698961692433 NA Intergenic Intergenic -17959 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-85 chr5 142809283 142809591 + 1.62698961692433 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 7950 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-79 chr7 66479751 66480004 + 1.62698961692433 NA Intergenic Intergenic -52400 NM_053080 56847 Mm.140988 NM_053080 ENSMUSG00000015134 Aldh1a3 ALDH6|RALDH3|V1 aldehyde dehydrogenase family 1, subfamily A3 protein-coding common_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433 chr1 135714196 135714447 + 1.62698961692433 NA Intergenic L2a|LINE|L2 -5742 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-81 chr7 87248258 87248652 + 1.62698961692433 NA intron (NM_001285833, intron 2 of 19) intron (NM_001285833, intron 2 of 19) 1806 NM_001285833 50490 Mm.31748 NM_015760 ENSMUSG00000030562 Nox4 AI648021 NADPH oxidase 4 protein-coding common_peak2_13_5_0.953791572644013_3.06185828704316_1.62698961692433 chr17 15499471 15499698 + 1.62698961692433 NA promoter-TSS (NM_013684) promoter-TSS (NM_013684) -304 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-106 chr9 123504194 123504416 + 1.62698961692433 NA intron (NM_013860, intron 2 of 7) intron (NM_013860, intron 2 of 7) -25448 NM_001357485 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-47 chr19 10497131 10497342 + 1.62698961692433 NA Intergenic Intergenic -14339 NM_133689 67752 Mm.25939 NM_133689 ENSMUSG00000035179 Ppp1r32 4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S protein phosphatase 1, regulatory subunit 32 protein-coding unique_peak1_14_5_1.05262502405122_3.11127501274676_1.62698961692433-70 chr5 102056313 102056565 + 1.62698961692433 NA intron (NM_172882, intron 1 of 66) intron (NM_172882, intron 1 of 66) 13482 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-91 chr7 90059358 90059599 + 1.62698961692433 NA Intergenic Intergenic 30319 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15|Gm26529|Gm32094 RIKEN cDNA E230029C05 gene ncRNA unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-30 chr13 36241528 36241772 + 1.62698961692433 NA intron (NM_001039189, intron 2 of 5) intron (NM_001039189, intron 2 of 5) 124007 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-24 chr19 11615115 11615337 + 1.62698961692433 NA TTS (NM_001276330) TTS (NM_001276330) 8493 NM_001276330 14126 Mm.329735 NM_013516 ENSMUSG00000024680 Ms4a2 FcRB|Fce1b|Fcer1b|Fcrbeta|Ms4a1|fcERI membrane-spanning 4-domains, subfamily A, member 2 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-46 chr8 122190658 122190887 + 1.62698961692433 NA Intergenic Intergenic -91369 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-82 chr5 92886179 92886368 + 1.62698961692433 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -11720 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-76 chr4 106957327 106957537 + 1.62698961692433 NA intron (NM_001355532, intron 1 of 14) intron (NM_001355532, intron 1 of 14) 34247 NM_001355532 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-29 chr13 32369608 32369828 + 1.62698961692433 NA Intergenic Intergenic -31174 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-8 chr11 5444649 5444877 + 1.62698961692433 NA promoter-TSS (NM_001080924) promoter-TSS (NM_001080924) 84 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-79 chr4 152368071 152368306 + 1.62698961692433 NA intron (NM_001081376, intron 15 of 41) intron (NM_001081376, intron 15 of 41) 29537 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding unique_peak1_13_5_0.953791572644013_3.06185828704316_1.62698961692433-101 chr8 71309575 71309769 + 1.62698961692433 NA intron (NM_001142322, intron 2 of 39) intron (NM_001142322, intron 2 of 39) 36958 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-4 chr1 170418406 170418658 + 1.62698961692433 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 109671 NM_001039593 76925 Mm.33631 NM_001039593 ENSMUSG00000042800 Spata46 1700015E13Rik spermatogenesis associated 46 protein-coding unique_peak2_5_12_-1.37545411254935_3.01271266186642_1.62698961692433-15 chr12 100692247 100692464 + 1.62698961692433 NA intron (NM_153587, intron 1 of 17) intron (NM_153587, intron 1 of 17) 32765 NM_001330702 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak2_680_635_-0.2095100225353_9.20812794401671_1.62612447956457 chr8 126849787 126853266 + 1.62612447956457 NA non-coding (NR_151740, exon 2 of 2) non-coding (NR_151740, exon 2 of 2) 2506 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_338_336_-0.292501456867397_8.25035405274816_1.62566589446548 chr15 79950930 79953696 + 1.62566589446548 NA Intergenic Intergenic -19667 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_102_55_0.590232443000623_6.10247114355792_1.62455010901961 chr8 61590655 61591199 + 1.62455010901961 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 242 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_102_55_0.590232443000623_6.10247114355792_1.62455010901961 chr1 91799890 91801173 + 1.62455010901961 NA promoter-TSS (NM_007855) promoter-TSS (NM_007855) -930 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_51_69_-0.710799822063097_5.77388310591342_1.62370182176243 chr2 172643090 172643990 + 1.62370182176243 NA Intergenic Intergenic 92549 NM_001159696 21420 Mm.3629 NM_009335 ENSMUSG00000028640 Tfap2c AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c transcription factor AP-2, gamma protein-coding unique_peak2_51_69_-0.710799822063097_5.77388310591342_1.62370182176243 chr16 91969957 91971031 + 1.62370182176243 NA Intergenic Intergenic -38864 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak2_51_69_-0.710799822063097_5.77388310591342_1.62370182176243-2 chr5 136051031 136051626 + 1.62370182176243 NA Intergenic Intergenic -5939 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak1_51_69_-0.710799822063097_5.77388310591342_1.62370182176243 chr4 3574681 3575632 + 1.62370182176243 NA promoter-TSS (NR_149728) promoter-TSS (NR_149728) 277 NM_054089 116940 Mm.171323 NM_054089 ENSMUSG00000028233 Tgs1 D4Ertd800e|Ncoa6ip|Pimt trimethylguanosine synthase 1 protein-coding common_peak1_83_43_0.646048097808839_5.78245566754172_1.62370182176242 chr3 108384041 108384948 + 1.62370182176242 NA promoter-TSS (NR_040560) promoter-TSS (NR_040560) 656 NM_019976 56742 Mm.389499 NM_019976 ENSMUSG00000068744 Psrc1 5430413I02Rik|AL033312|Dda3 proline/serine-rich coiled-coil 1 protein-coding common_peak2_77_95_-0.585643703611832_6.29214064891524_1.62191737669453 chr6 124740525 124741538 + 1.62191737669453 NA promoter-TSS (NM_013535) promoter-TSS (NM_013535) 48 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak2_115_64_0.545490228775567_6.29511292741624_1.6219173766945 chr2 130423851 130424866 + 1.6219173766945 NA promoter-TSS (NM_030559) promoter-TSS (NM_030559) 38 NM_030559 80743 Mm.276092 NM_030559 ENSMUSG00000027411 Vps16 1810074M16Rik|mVPS16 VSP16 CORVET/HOPS core subunit protein-coding common_peak1_96_51_0.611170836269986_6.00602513627608_1.62091282503239 chr3 145886852 145888081 + 1.62091282503239 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -36796 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_95_51_0.596325969157671_5.99860270271993_1.62091282503239-2 chr19 5566992 5567893 + 1.62091282503239 NA promoter-TSS (NM_001033448) promoter-TSS (NM_001033448) -582 NM_001362046 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962|beta-5 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_95_51_0.596325969157671_5.99860270271993_1.62091282503239 chr14 46787359 46788326 + 1.62091282503239 NA intron (NM_001355011, intron 1 of 5) CpG 515 NM_001355011 12793 Mm.3261 NM_009919 ENSMUSG00000015759 Cnih1 0610007J15|CNIH-1|Cnih cornichon family AMPA receptor auxiliary protein 1 protein-coding common_peak1_95_51_0.596325969157671_5.99860270271993_1.62091282503239 chr14 46787403 46788322 + 1.62091282503239 NA intron (NM_001355011, intron 1 of 5) CpG 495 NM_001355011 12793 Mm.3261 NM_009919 ENSMUSG00000015759 Cnih1 0610007J15|CNIH-1|Cnih cornichon family AMPA receptor auxiliary protein 1 protein-coding common_peak2_56_74_-0.678819633723279_5.88940887363424_1.62037624578621 chr8 33599643 33600325 + 1.62037624578621 NA exon (NM_017374, exon 1 of 7) exon (NM_017374, exon 1 of 7) 363 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak1_72_36_0.694962069936977_5.55693440059744_1.61783625824857-2 chr4 155991991 155992666 + 1.61783625824857 NA promoter-TSS (NM_011341) promoter-TSS (NM_011341) 350 NM_080445 117592 Mm.440185 NM_080445 ENSMUSG00000050796 B3galt6 BB129894|GalTII UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 protein-coding common_peak1_72_36_0.694962069936977_5.55693440059744_1.61783625824857 chr15 80912490 80913337 + 1.61783625824857 NA intron (NM_177124, intron 14 of 21) intron (NM_177124, intron 14 of 21) -27126 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_43_60_-0.751561934965826_5.55495637007997_1.61783625824855 chr1 186704079 186704871 + 1.61783625824855 NA exon (NM_001329107, exon 1 of 8) exon (NM_001329107, exon 1 of 8) 1514 NM_009367 21808 Mm.18213 NM_009367 ENSMUSG00000039239 Tgfb2 BB105277|Tgf-beta2|Tgfb-2 transforming growth factor, beta 2 protein-coding common_peak2_43_60_-0.751561934965826_5.55495637007997_1.61783625824855 chr13 98027285 98028257 + 1.61783625824855 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 178394 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak1_43_60_-0.751561934965826_5.55495637007997_1.61783625824855-2 chr7 80840223 80840903 + 1.61783625824855 NA Intergenic Intergenic -21545 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_273_174_0.347949482710208_7.62518585318743_1.61766075021991 chr6 31124904 31127360 + 1.61766075021991 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -63039 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_122_69_0.522512152882927_6.39053909338643_1.61685863715171 chr11 60935475 60936381 + 1.61685863715171 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 3871 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_122_69_0.522512152882927_6.39053909338643_1.61685863715171 chr7 141469252 141470474 + 1.61685863715171 NA intron (NM_001111049, intron 4 of 7) intron (NM_001111049, intron 4 of 7) 1074 NM_001111050 12476 Mm.30246 NM_009842 ENSMUSG00000025510 Cd151 PETA-3|SFA-1|Tspan24 CD151 antigen protein-coding common_peak1_123_69_0.534111543034571_6.39633878846225_1.61685863715171 chr7 123108633 123110228 + 1.61685863715171 NA Intergenic B1_Mur4|SINE|Alu -14455 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-4 chr1 135594640 135594971 + 1.61682445937017 NA Intergenic Intergenic -2971 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-14 chr17 72925521 72925779 + 1.61682445937017 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 7345 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-47 chr7 65439662 65440068 + 1.61682445937017 NA Intergenic Intergenic -68621 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-39 chr5 23626903 23627152 + 1.61682445937017 NA intron (NM_001359174, intron 2 of 16) intron (NM_001359174, intron 2 of 16) -10456 NM_009274 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-41 chr5 110230091 110230362 + 1.61682445937017 NA promoter-TSS (NM_001253814) promoter-TSS (NM_001253814) -778 NM_001253814 71782 Mm.288442 NM_027922 ENSMUSG00000029501 Ankle2 1110001J12Rik|AI661024|D5Ertd585e ankyrin repeat and LEM domain containing 2 protein-coding common_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-3 chr5 91114446 91114801 + 1.61682445937017 NA Intergenic Intergenic -24976 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-10 chr12 28532169 28532505 + 1.61682445937017 NA intron (NM_001177964, intron 3 of 8) intron (NM_001177964, intron 3 of 8) 16000 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-9 chr11 96862590 96862823 + 1.61682445937017 NA Intergenic Intergenic 12313 NR_029562 387170 NR_029562 ENSMUSG00000065515 Mir152 Mirn152|mir-152|mmu-mir-152 microRNA 152 ncRNA unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-14 chr14 57284095 57284719 + 1.61682445937017 NA intron (NM_030004, intron 6 of 7) intron (NM_030004, intron 6 of 7) 114076 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017 chr1 152817024 152817316 + 1.61682445937017 NA intron (NM_010877, intron 4 of 15) intron (NM_010877, intron 4 of 15) 17017 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-19 chr5 102698510 102698709 + 1.61682445937017 NA intron (NM_146161, intron 2 of 8) intron (NM_146161, intron 2 of 8) -70201 NM_001286468 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-8 chr11 84063141 84063547 + 1.61682445937017 NA intron (NM_019819, intron 1 of 2) B3|SINE|B2 5013 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-21 chr6 86851118 86851333 + 1.61682445937017 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 1708 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-25 chr17 56462866 56463204 + 1.61682445937017 NA promoter-TSS (NM_001252456) promoter-TSS (NM_001252456) -814 NM_001252456 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-16 chr14 69325915 69326391 + 1.61682445937017 NA Intergenic Intergenic 10984 NR_045091 100504477 Mm.396396 NR_045091 ENSMUSG00000097511 Gm16677 - predicted gene, 16677 ncRNA unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-18 chr15 25393884 25394162 + 1.61682445937017 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 19741 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-6 chr11 62026217 62026495 + 1.61682445937017 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) -50668 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-35 chr3 93446789 93447088 + 1.61682445937017 NA exon (NM_001163098, exon 2 of 2) exon (NM_001163098, exon 2 of 2) 4608 NM_001163098 99681 Mm.316671 NM_001163098 ENSMUSG00000052415 Tchh AHF|AI597080|Thh trichohyalin protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-25 chrX 98868026 98868250 + 1.61682445937017 NA intron (NM_001313755, intron 2 of 23) intron (NM_001313755, intron 2 of 23) 22887 NM_052976 94190 Mm.33536 NM_052976 ENSMUSG00000031214 Ophn1 C130037N19Rik|Wtgr oligophrenin 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-27 chr18 61040925 61041304 + 1.61682445937017 NA Intergenic Intergenic -4036 NM_001146268 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-11 chr12 31296403 31296659 + 1.61682445937017 NA intron (NM_008482, intron 12 of 32) intron (NM_008482, intron 12 of 32) 31237 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-22 chr17 44376056 44376392 + 1.61682445937017 NA Intergenic Intergenic 187652 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg|nmf318 chloride intracellular channel 5 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-49 chr8 126922062 126922273 + 1.61682445937017 NA Intergenic Intergenic 23754 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-11 chr16 24450862 24451068 + 1.61682445937017 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 2874 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-19 chr15 37608638 37608865 + 1.61682445937017 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 71823 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-3 chr11 5859406 5859720 + 1.61682445937017 NA Intergenic Intergenic -2303 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-12 chr17 8092714 8092930 + 1.61682445937017 NA intron (NM_001033442, intron 2 of 3).2 intron (NM_001033442, intron 2 of 3).2 8406 NM_001033442 381059 Mm.490353 NM_001033442 ENSMUSG00000095720 Gm1604b Gm1604 predicted gene 1604b protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-34 chr3 83843402 83843681 + 1.61682445937017 NA Intergenic Intergenic -1933 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-24 chr8 70628171 70628412 + 1.61682445937017 NA Intergenic Intergenic 3804 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-17 chr15 8445641 8445830 + 1.61682445937017 NA Intergenic (TTTG)n|Simple_repeat|Simple_repeat -1272 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-2 chr1 64927694 64927987 + 1.61682445937017 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 28984 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-50 chrX 145490826 145491059 + 1.61682445937017 NA Intergenic Intergenic -3303 NM_153319 27494 Mm.100068 NM_153319 ENSMUSG00000041688 Amot CAG-2|D0Kist1|Sii6 angiomotin protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-26 chr17 66510736 66510968 + 1.61682445937017 NA intron (NM_024448, intron 1 of 5) intron (NM_024448, intron 1 of 5) 8818 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-17 chr4 119306296 119306561 + 1.61682445937017 NA 3' UTR (NM_001110129, exon 10 of 10) 3' UTR (NM_001110129, exon 10 of 10) -11915 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-23 chr17 47373944 47374160 + 1.61682445937017 NA intron (NM_183086, intron 3 of 6) intron (NM_183086, intron 3 of 6) 4855 NM_183086 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-23 chr7 112283074 112283468 + 1.61682445937017 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 57435 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-3 chr1 134083934 134084369 + 1.61682445937017 NA Intergenic Intergenic -4996 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-29 chr19 41937190 41937439 + 1.61682445937017 NA intron (NM_001360676, intron 2 of 11) intron (NM_001360676, intron 2 of 11) 3869 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-18 chr4 137897057 137897302 + 1.61682445937017 NA intron (NM_199307, intron 1 of 19) intron (NM_199307, intron 1 of 19) 34942 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-38 chr5 23256444 23256674 + 1.61682445937017 NA intron (NM_001081231, intron 3 of 3) intron (NM_001081231, intron 3 of 3) 177794 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-37 chr3 121893804 121894010 + 1.61682445937017 NA Intergenic Intergenic -59322 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-22 chr7 110774878 110775227 + 1.61682445937017 NA intron (NM_009667, intron 1 of 14) intron (NM_009667, intron 1 of 14) 2448 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-7 chr11 78365806 78366054 + 1.61682445937017 NA intron (NM_008238, intron 6 of 8) intron (NM_008238, intron 6 of 8) 19220 NM_001313987 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-7 chr13 90171744 90172047 + 1.61682445937017 NA Intergenic Intergenic 82228 NM_025335 66074 Mm.241387 NM_025335 ENSMUSG00000012422 Tmem167 0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a transmembrane protein 167 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-40 chr5 39619839 39620068 + 1.61682445937017 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) -16379 NR_045416 75095 Mm.332354 NR_045416 ENSMUSG00000106741 4930513D17Rik - RIKEN cDNA 4930513D17 gene ncRNA unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-45 chr6 108326352 108326705 + 1.61682445937017 NA intron (NM_010585, intron 4 of 61) intron (NM_010585, intron 4 of 61) 113432 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-5 chr10 122847644 122847832 + 1.61682445937017 NA intron (NM_001110218, intron 4 of 9) intron (NM_001110218, intron 4 of 9) 137986 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-32 chr2 35233650 35233927 + 1.61682445937017 NA Intergenic Intergenic -22571 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-5 chr11 21549812 21550221 + 1.61682445937017 NA Intergenic Intergenic 21918 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-28 chr18 69435888 69436158 + 1.61682445937017 NA intron (NM_001361128, intron 3 of 19) intron (NM_001361128, intron 3 of 19) 89863 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-36 chr3 102464932 102465173 + 1.61682445937017 NA Intergenic Intergenic -4867 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-31 chr2 27505441 27505824 + 1.61682445937017 NA Intergenic Intergenic -9515 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-6 chr11 69094453 69094769 + 1.61682445937017 NA Intergenic Intergenic -4338 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-48 chr8 78741099 78741296 + 1.61682445937017 NA Intergenic Intergenic 79955 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-10 chr16 20020606 20020811 + 1.61682445937017 NA Intergenic Intergenic -37659 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-8 chr14 7863428 7863736 + 1.61682445937017 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 45625 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-15 chr19 37435039 37435307 + 1.61682445937017 NA exon (NM_008245, exon 1 of 4) exon (NM_008245, exon 1 of 4) 332 NM_008245 15242 Mm.33896 NM_008245 ENSMUSG00000024986 Hhex Hex|Hex1|Hhex-rs2|Prh|Prhx hematopoietically expressed homeobox protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-20 chr5 115003248 115003479 + 1.61682445937017 NA Intergenic Intergenic -8161 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-2 chr17 75277464 75277725 + 1.61682445937017 NA intron (NM_019919, intron 12 of 33) intron (NM_019919, intron 12 of 33) 98813 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-42 chr5 125096572 125096785 + 1.61682445937017 NA intron (NM_011424, intron 8 of 46) intron (NM_011424, intron 8 of 46) 82536 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-30 chr19 59400050 59400329 + 1.61682445937017 NA Intergenic Intergenic -54409 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-16 chr19 46040490 46040846 + 1.61682445937017 NA intron (NM_001113408, intron 1 of 10) intron (NM_001113408, intron 1 of 10) -1047 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-15 chr14 66027544 66027833 + 1.61682445937017 NA intron (NM_009618, intron 20 of 20) intron (NM_009618, intron 20 of 20) -18478 NM_178747 268756 Mm.26207 NM_178747 ENSMUSG00000034450 Gulo 5730581M22|AU018375|BC028822|GLO|LGO|sfx|unh|unhip gulonolactone (L-) oxidase protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-20 chr16 92117718 92117966 + 1.61682445937017 NA Intergenic Intergenic 59506 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-4 chr11 6587085 6587297 + 1.61682445937017 NA intron (NM_146014, intron 4 of 9) intron (NM_146014, intron 4 of 9) 18863 NM_001081652 192950 Mm.337771 NM_001081652 ENSMUSG00000041073 Nacad D230024G13Rik|mKIAA0363 NAC alpha domain containing protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-33 chr3 52444206 52444530 + 1.61682445937017 NA Intergenic B1F1|SINE|Alu -72596 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-43 chr6 53652484 53652762 + 1.61682445937017 NA intron (NM_001327821, intron 7 of 10) intron (NM_001327821, intron 7 of 10) 79249 NM_172728 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-12 chr14 20193086 20193451 + 1.61682445937017 NA Intergenic Intergenic -11486 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-13 chr17 70844648 70844977 + 1.61682445937017 NA exon (NM_009372, exon 3 of 3) exon (NM_009372, exon 3 of 3) 1965 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017 chr13 93771620 93771891 + 1.61682445937017 NA promoter-TSS (NM_009712) promoter-TSS (NM_009712) 76 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017 chr1 64810002 64810278 + 1.61682445937017 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -72390 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-2 chr10 23456814 23457070 + 1.61682445937017 NA Intergenic Intergenic -106999 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-21 chr17 31966918 31967376 + 1.61682445937017 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 67361 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-44 chr6 99094192 99094457 + 1.61682445937017 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -66026 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-46 chr6 146875358 146875633 + 1.61682445937017 NA Intergenic Intergenic -12999 NM_001355728 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-13 chr14 50944143 50944374 + 1.61682445937017 NA promoter-TSS (NM_013632) promoter-TSS (NM_013632) -45 NM_013632 18950 Mm.17932 NM_013632 ENSMUSG00000115338 Pnp AL024301|AU015798|Np|Np-1|Np-2|Pnp1 purine-nucleoside phosphorylase protein-coding unique_peak1_18_5_1.39125593339724_3.28059046741977_1.61682445937017-24 chr17 48437530 48437876 + 1.61682445937017 NA Intergenic Intergenic -4975 NM_009694 11811 Mm.281793 NM_009694 ENSMUSG00000040694 Apobec2 Arp1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 protein-coding unique_peak2_5_16_-1.7624772356586_3.20622422342104_1.61682445937017-9 chr14 31890836 31891085 + 1.61682445937017 NA Intergenic Intergenic -60545 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak1_161_95_0.461364972833214_6.81564498713776_1.61647085016149 chr16 90283385 90284437 + 1.61647085016149 NA intron (NM_001346799, intron 1 of 19) CpG 575 NM_001346799 224432 Mm.439811 NM_178923 ENSMUSG00000022983 Scaf4 AA517739|Sfrs15|Sra4|Srsf15 SR-related CTD-associated factor 4 protein-coding common_peak2_137_79_0.494705829563102_6.56928100966891_1.61535757763815 chr2 131492029 131492999 + 1.61535757763815 NA intron (NM_001177840, intron 1 of 3) CpG 652 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_137_79_0.494705829563102_6.56928100966891_1.61535757763815 chr6 39556872 39558378 + 1.61535757763815 NA 5' UTR (NM_172477, exon 1 of 19) 5' UTR (NM_172477, exon 1 of 19) 209 NM_172477 209773 Mm.440021 NM_172477 ENSMUSG00000038456 Dennd2a B930096L08Rik|C130031G22|mKIAA1277 DENN/MADD domain containing 2A protein-coding common_peak2_89_107_-0.550574334310129_6.4796003350084_1.61484863193182 chr6 34780061 34781276 + 1.61484863193182 NA 5' UTR (NM_001289657, exon 1 of 19) 5' UTR (NM_001289657, exon 1 of 19) 236 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak1_457_307_0.268316807744048_8.40094494456693_1.61483635265261 chr8 26974395 26977069 + 1.61483635265261 NA Intergenic Intergenic -1604 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak1_195_119_0.412357588611047_7.11306938991404_1.61411170324017 chr11 35978757 35980729 + 1.61411170324017 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 346 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_169_101_0.442952454972347_6.89390156945767_1.61304693160011 chr5 144962870 144963980 + 1.61304693160011 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 2405 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_109_60_0.561039984214807_6.21125732967029_1.61274135946685 chr1 93634782 93635683 + 1.61274135946685 NA intron (NM_021537, intron 2 of 11) CpG 495 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding common_peak1_109_60_0.561039984214807_6.21125732967029_1.61274135946685-2 chr9 113741057 113742071 + 1.61274135946685 NA promoter-TSS (NM_001286599) promoter-TSS (NM_001286599) 91 NM_001114347 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak2_72_90_-0.60337920463277_6.20610503788231_1.61274135946684 chr11 76845861 76846931 + 1.61274135946684 NA exon (NM_007754, exon 1 of 21) exon (NM_007754, exon 1 of 21) 612 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-4 chr12 82085884 82086170 + 1.61268301619756 NA Intergenic Intergenic -83989 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-25 chr7 137085722 137086048 + 1.61268301619756 NA intron (NM_008598, intron 2 of 4) intron (NM_008598, intron 2 of 4) -148798 NR_045885 100038555 Mm.444788 NR_045885 ENSMUSG00000109722 Gm10578 - predicted gene 10578 ncRNA unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-6 chr14 34280624 34281031 + 1.61268301619756 NA intron (NR_153399, intron 2 of 11) intron (NR_153399, intron 2 of 11) 29690 NR_153399 75698 Mm.45406 NM_029389 ENSMUSG00000041471 Fam35a 3110001K24Rik family with sequence similarity 35, member A protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-21 chr3 51222825 51223061 + 1.61268301619756 NA Intergenic Intergenic -1504 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-4 chr11 59413728 59414091 + 1.61268301619756 NA intron (NM_001356454, intron 3 of 3) intron (NM_001356454, intron 3 of 3) 36125 NM_001356454 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-11 chr18 46863461 46863793 + 1.61268301619756 NA intron (NM_029008, intron 1 of 19) intron (NM_029008, intron 1 of 19) 13588 NM_029008 74574 Mm.26379 NM_029008 ENSMUSG00000024481 Lvrn 4833403I15Rik|APQ|Aqpep laeverin protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-15 chr3 96269724 96270033 + 1.61268301619756 NA TTS (NM_178215) TTS (NM_178215) 178 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-22 chr7 58822000 58822279 + 1.61268301619756 NA intron (NM_009728, intron 16 of 20) intron (NM_009728, intron 16 of 20) 163937 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-9 chr16 85142761 85143028 + 1.61268301619756 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 30813 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-19 chr6 37357009 37357353 + 1.61268301619756 NA intron (NM_178661, intron 5 of 11) intron (NM_178661, intron 5 of 11) -57205 NM_001347104 320127 Mm.119469 NM_001081206 ENSMUSG00000038665 Dgki 6430604M11Rik|C130010K08Rik diacylglycerol kinase, iota protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-2 chr1 191216278 191216546 + 1.61268301619756 NA Intergenic Intergenic -8042 NR_151547 100504360 Mm.16927 NM_001033188 D730003I15Rik AU020850 RIKEN cDNA D730003I15 gene ncRNA unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-23 chr8 14889098 14889350 + 1.61268301619756 NA intron (NM_012000, intron 1 of 2) intron (NM_012000, intron 1 of 2) 688 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-23 chr5 35019219 35019669 + 1.61268301619756 NA exon (NM_001163512, exon 2 of 14) exon (NM_001163512, exon 2 of 14) -1605 NR_037280 100526557 NR_037280 ENSMUSG00000093097 Mir3097 mir-3097|mmu-mir-3097 microRNA 3097 ncRNA unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-6 chr12 70967705 70968092 + 1.61268301619756 NA Intergenic Intergenic -6725 NM_001310595 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-6 chr15 56723506 56724089 + 1.61268301619756 NA Intergenic Intergenic -29251 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756 chr1 138596019 138596519 + 1.61268301619756 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 23488 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-8 chr14 99625687 99626212 + 1.61268301619756 NA Intergenic Intergenic 327258 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-24 chrX 94169853 94170245 + 1.61268301619756 NA Intergenic PB1D10|SINE|Alu 42602 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-8 chr15 32262628 32262877 + 1.61268301619756 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 17939 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-27 chr9 43237092 43237525 + 1.61268301619756 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 2508 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756 chr13 113337565 113337985 + 1.61268301619756 NA Intergenic Intergenic 128116 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-13 chr18 68128728 68129200 + 1.61268301619756 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -98982 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_24_8_1.19942884028324_3.76963942158393_1.61268301619756 chr10 75899654 75899945 + 1.61268301619756 NA intron (NM_011418, intron 7 of 8) intron (NM_011418, intron 7 of 8) 6401 NM_001358985 70377 Mm.275878 NM_024440 ENSMUSG00000009092 Derl3 1810006I20Rik|1810063P04Rik|IZP6|derlin-3 Der1-like domain family, member 3 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-13 chr18 80644739 80645192 + 1.61268301619756 NA intron (NM_198429, intron 8 of 9) intron (NM_198429, intron 8 of 9) 63208 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-24 chr7 72589440 72589790 + 1.61268301619756 NA Intergenic Intergenic -283020 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-9 chr15 80019800 80020307 + 1.61268301619756 NA Intergenic Intergenic -5245 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-10 chr15 85420847 85421266 + 1.61268301619756 NA intron (NM_016843, intron 9 of 11) intron (NM_016843, intron 9 of 11) 82171 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-2 chr5 64865754 64865959 + 1.61268301619756 NA Intergenic Intergenic 62333 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-20 chr3 41375675 41376018 + 1.61268301619756 NA Intergenic Intergenic 117353 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-17 chr4 132515005 132515299 + 1.61268301619756 NA Intergenic Intergenic -4696 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-17 chr3 27650377 27650615 + 1.61268301619756 NA intron (NM_173182, intron 1 of 25) B1_Mur4|SINE|Alu 59956 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-14 chr3 88504268 88504468 + 1.61268301619756 NA Intergenic Intergenic -1016 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756 chr1 64601816 64602191 + 1.61268301619756 NA 3' UTR (NM_009952, exon 9 of 9) 3' UTR (NM_009952, exon 9 of 9) 15165 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-18 chr4 142047897 142048304 + 1.61268301619756 NA intron (NM_145402, intron 1 of 2) intron (NM_145402, intron 1 of 2) 30202 NR_131014 78917 Mm.139995 NR_131014 ENSMUSG00000085761 4930455G09Rik - RIKEN cDNA 4930455G09 gene ncRNA unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-11 chr18 24116403 24116916 + 1.61268301619756 NA intron (NM_172625, intron 1 of 4) intron (NM_172625, intron 1 of 4) 5160 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-22 chr3 121689096 121689486 + 1.61268301619756 NA Intergenic Intergenic 18528 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-16 chr2 125391805 125392362 + 1.61268301619756 NA intron (NM_007993, intron 10 of 65) intron (NM_007993, intron 10 of 65) 114355 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-8 chr4 132397078 132397530 + 1.61268301619756 NA intron (NM_001161797, intron 2 of 12) intron (NM_001161797, intron 2 of 12) 25142 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-7 chr16 24912098 24912567 + 1.61268301619756 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -147307 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-5 chr12 53758843 53759231 + 1.61268301619756 NA intron (NM_013780, intron 4 of 11) intron (NM_013780, intron 4 of 11) 444837 NM_028133 112407 Mm.133037 NM_028133 ENSMUSG00000035105 Egln3 2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20 egl-9 family hypoxia-inducible factor 3 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-15 chr2 117941438 117941914 + 1.61268301619756 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 119748 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-26 chr8 106738197 106738612 + 1.61268301619756 NA intron (NM_173037, intron 12 of 17) B3|SINE|B2 55336 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-7 chr14 45526986 45527338 + 1.61268301619756 NA intron (NM_146054, intron 2 of 14) intron (NM_146054, intron 2 of 14) 2903 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-20 chr6 49657098 49657513 + 1.61268301619756 NA Intergenic Intergenic -165405 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756 chr10 7179801 7180155 + 1.61268301619756 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 32259 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-10 chr17 66358884 66359415 + 1.61268301619756 NA intron (NM_172963, intron 8 of 13) intron (NM_172963, intron 8 of 13) 90601 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756 chr15 62283781 62284037 + 1.61268301619756 NA Intergenic Intergenic -64458 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756 chr2 151917876 151918079 + 1.61268301619756 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 6770 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-19 chr3 37882159 37882384 + 1.61268301619756 NA Intergenic Intergenic -16542 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-3 chr11 22632165 22632414 + 1.61268301619756 NA Intergenic Intergenic 120006 NM_153596 103765 Mm.221274 NM_153596 ENSMUSG00000049904 Tmem17 AI503894|AW049890 transmembrane protein 17 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-12 chr18 75489879 75490333 + 1.61268301619756 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -24539 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-3 chr1 193517329 193517604 + 1.61268301619756 NA Intergenic Intergenic -9936 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-3 chr12 59013518 59013824 + 1.61268301619756 NA intron (NM_025656, intron 1 of 9) CpG 280 NM_025656 66603 Mm.35353 NM_025656 ENSMUSG00000060121 Gemin2 Sip1|gemin-2 gem nuclear organelle associated protein 2 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-14 chr2 32170382 32170751 + 1.61268301619756 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 19418 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_9_21_-1.40267969609238_3.75809177059111_1.61268301619756 chr5 33274772 33274968 + 1.61268301619756 NA 5' UTR (NM_001310535, exon 1 of 8) 5' UTR (NM_001310535, exon 1 of 8) 134 NM_001310535 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-16 chr4 55004605 55004953 + 1.61268301619756 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 56834 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_25_8_1.2556131730128_3.79773158794871_1.61268301619756 chr1 160058425 160058668 + 1.61268301619756 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 14166 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-2 chr10 111365414 111365634 + 1.61268301619756 NA Intergenic Intergenic 66845 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-18 chr3 30696644 30696964 + 1.61268301619756 NA intron (NM_001309233, intron 1 of 8) intron (NM_001309233, intron 1 of 8) 3039 NM_001309233 320352 Mm.229153 NM_001309233 ENSMUSG00000074653 Lrrc31 E230002P03Rik leucine rich repeat containing 31 protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-5 chr12 100199060 100199338 + 1.61268301619756 NA promoter-TSS (NM_009790) promoter-TSS (NM_009790) -236 NM_009790 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1 calmodulin 1 protein-coding common_peak2_25_8_1.2556131730128_3.79773158794871_1.61268301619756-2 chr18 38338579 38338791 + 1.61268301619756 NA intron (NM_011937, intron 1 of 6) intron (NM_011937, intron 1 of 6) 308 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-2 chr10 56377389 56377781 + 1.61268301619756 NA intron (NM_010288, intron 1 of 1) intron (NM_010288, intron 1 of 1) 285 NM_010288 14609 Mm.378921 NM_010288 ENSMUSG00000050953 Gja1 AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43 gap junction protein, alpha 1 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-7 chr14 64950169 64950572 + 1.61268301619756 NA promoter-TSS (NM_001347627) promoter-TSS (NM_001347627) 325 NM_001253731 210925 Mm.71332 NM_153414 ENSMUSG00000021975 Ints9 BC028953|D14Ertd231e integrator complex subunit 9 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-21 chr6 120159251 120159608 + 1.61268301619756 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -34394 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding unique_peak2_9_21_-1.40267969609238_3.75809177059111_1.61268301619756-9 chr4 134768417 134768759 + 1.61268301619756 NA promoter-TSS (NM_145554) promoter-TSS (NM_145554) -584 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-28 chr9 71439205 71439612 + 1.61268301619756 NA Intergenic Intergenic 45550 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-5 chr11 119085815 119086096 + 1.61268301619756 NA exon (NM_007625, exon 1 of 5) exon (NM_007625, exon 1 of 5) 282 NM_007625 12418 Mm.268070 NM_007625 ENSMUSG00000039989 Cbx4 MPc2|PC2 chromobox 4 protein-coding unique_peak1_25_8_1.2556131730128_3.79773158794871_1.61268301619756-4 chr11 107416933 107417134 + 1.61268301619756 NA intron (NR_153311, intron 1 of 9) intron (NR_153311, intron 1 of 9) 53687 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak1_24_8_1.19942884028324_3.76963942158393_1.61268301619756-12 chr18 60614731 60615216 + 1.61268301619756 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) -4869 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_187_113_0.426661329990825_7.04622067916015_1.6121465271382 chr8 122172178 122173973 + 1.6121465271382 NA Intergenic Intergenic -109066 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_137_153_-0.450152616244436_7.04171023257268_1.6121465271382 chr11 86958214 86959811 + 1.6121465271382 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 34750 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_130_146_-0.457610036393974_6.97086732663938_1.61170819801451 chr11 79253516 79255083 + 1.61170819801451 NA intron (NM_019653, intron 1 of 8) CpG 396 NM_019653 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_391_383_-0.272769296074834_8.44857785268374_1.61168094651928 chr16 24392247 24395875 + 1.61168094651928 NA promoter-TSS (NR_037954) promoter-TSS (NR_037954) -406 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA common_peak1_18_33_-1.11124440713195_4.53184063768437_1.60877160026698 chr12 8313564 8313940 + 1.60877160026698 NA intron (NM_021429, intron 1 of 6) intron (NM_021429, intron 1 of 6) 319 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_18_33_-1.11124440713195_4.53184063768437_1.60877160026698 chr10 96822247 96822646 + 1.60877160026698 NA Intergenic Intergenic 205445 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_18_33_-1.11124440713195_4.53184063768437_1.60877160026698 chr11 82020291 82020757 + 1.60877160026698 NA Intergenic Intergenic -15053 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_18_33_-1.11124440713195_4.53184063768437_1.60877160026698-2 chr15 55043783 55044086 + 1.60877160026698 NA intron (NM_001081288, intron 16 of 25) intron (NM_001081288, intron 16 of 25) 28218 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding common_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-3 chr19 18715939 18716437 + 1.60877160026697 NA intron (NM_177640, intron 1 of 1) intron (NM_177640, intron 1 of 1) 2952 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding unique_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-3 chr14 50944632 50945425 + 1.60877160026697 NA intron (NM_013632, intron 1 of 5) intron (NM_013632, intron 1 of 5) 725 NM_013632 18950 Mm.17932 NM_013632 ENSMUSG00000115338 Pnp AL024301|AU015798|Np|Np-1|Np-2|Pnp1 purine-nucleoside phosphorylase protein-coding unique_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697 chr1 37871852 37872718 + 1.60877160026697 NA promoter-TSS (NM_001037918) promoter-TSS (NM_001037918) 79 NM_001037918 623661 Mm.138000 NM_001037918 ENSMUSG00000037216 Lipt1 EG623661 lipoyltransferase 1 protein-coding unique_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-5 chr19 46349160 46349417 + 1.60877160026697 NA promoter-TSS (NR_040418) promoter-TSS (NR_040418) -300 NR_040418 75579 Mm.436708 NR_040418 2310034G01Rik - RIKEN cDNA 2310034G01 gene ncRNA common_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-4 chr9 35199604 35199944 + 1.60877160026697 NA intron (NM_001177845, intron 1 of 6) CpG 131 NM_001177847 117149 Mm.23987 NM_054096 ENSMUSG00000032041 Tirap AA407980|C130027E04Rik|Mal|Tlr4ap|Wyatt toll-interleukin 1 receptor (TIR) domain-containing adaptor protein protein-coding unique_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-2 chr12 85619908 85620503 + 1.60877160026697 NA intron (NM_001205053, intron 2 of 3) intron (NM_001205053, intron 2 of 3) 20187 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-4 chr14 62991488 62991877 + 1.60877160026697 NA Intergenic Intergenic -6395 NM_001039125 654465 Mm.424929 NM_001039125 ENSMUSG00000075573 Defb47 Defb41|EG654465 defensin beta 47 protein-coding common_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697-2 chr17 78351332 78351875 + 1.60877160026697 NA intron (NM_015800, intron 12 of 16) intron (NM_015800, intron 12 of 16) 66549 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_39_16_0.955179122148091_4.56505240232439_1.60877160026697 chr17 7170280 7170653 + 1.60877160026697 NA intron (NM_011299, intron 1 of 20) CpG 351 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_39_16_0.955179122148091_4.56505240232439_1.60877160026697 chr10 127621355 127621649 + 1.60877160026697 NA promoter-TSS (NM_008512) promoter-TSS (NM_008512) -354 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_308_199_0.327511797937713_7.80761208874358_1.60876314282296 chr11 69878703 69880998 + 1.60876314282296 NA exon (NM_153143, exon 1 of 1) exon (NM_153143, exon 1 of 1) 1135 NM_153143 216858 Mm.239498 NM_153143 ENSMUSG00000046731 Kctd11 AF465352|Ren potassium channel tetramerisation domain containing 11 protein-coding unique_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084-3 chr6 52639501 52640234 + 1.60774463804084 NA intron (NM_145567, intron 1 of 7) intron (NM_145567, intron 1 of 7) 433 NM_145567 58875 Mm.286458 NM_145567 ENSMUSG00000029776 Hibadh 6430402H10Rik|AI265272 3-hydroxyisobutyrate dehydrogenase protein-coding unique_peak1_48_21_0.873926524728757_4.89639488100168_1.60774463804084-2 chr9 21149579 21149935 + 1.60774463804084 NA exon (NM_016742, exon 1 of 8) exon (NM_016742, exon 1 of 8) 149 NM_016742 12539 Mm.32331 NM_016742 ENSMUSG00000019471 Cdc37 p50|p50Cdc37 cell division cycle 37 protein-coding common_peak1_48_21_0.873926524728757_4.89639488100168_1.60774463804084-2 chr13 91930899 91931643 + 1.60774463804084 NA intron (NM_009027, intron 5 of 14) intron (NM_009027, intron 5 of 14) -54386 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding common_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084 chr18 36408471 36409276 + 1.60774463804084 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 45622 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084-4 chr5 142894884 142895505 + 1.60774463804084 NA promoter-TSS (NM_001033312) promoter-TSS (NM_001033312) 44 NM_001033312 231863 Mm.89753 NM_001033312 ENSMUSG00000066640 Fbxl18 AI427077|B130019G13Rik|C330021B20Rik F-box and leucine-rich repeat protein 18 protein-coding common_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084-2 chr13 36534573 36535232 + 1.60774463804084 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 199575 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak2_47_21_0.844389048234708_4.88162614275465_1.60774463804084 chr11 75398863 75399293 + 1.60774463804084 NA intron (NM_001102611, intron 5 of 10) intron (NM_001102611, intron 5 of 10) 23545 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak2_48_21_0.873926524728757_4.89639488100168_1.60774463804084-2 chr7 128592003 128592472 + 1.60774463804084 NA Intergenic AT_rich|Low_complexity|Low_complexity -19128 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding common_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084-5 chr8 45974712 45975354 + 1.60774463804084 NA promoter-TSS (NM_138668) promoter-TSS (NM_138668) 219 NM_001359113 69479 Mm.158282 NM_001033148 ENSMUSG00000071103 1700029J07Rik - RIKEN cDNA 1700029J07 gene protein-coding common_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084-2 chr19 5039015 5039468 + 1.60774463804084 NA exon (NM_175383, exon 1 of 2) exon (NM_175383, exon 1 of 2) 415 NM_175383 108902 Mm.29628 NM_175383 ENSMUSG00000047379 B4gat1 1500032M01Rik|B3gnt1|B3gnt6|BETA3GNT1|iGAT|iGNT beta-1,4-glucuronyltransferase 1 protein-coding unique_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084 chr1 93160442 93161135 + 1.60774463804084 NA promoter-TSS (NM_001159940) promoter-TSS (NM_001159940) 82 NM_001159940 71874 Mm.158766 NM_172411 ENSMUSG00000034159 2310007B03Rik - RIKEN cDNA 2310007B03 gene protein-coding common_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084-5 chr2 172440594 172440996 + 1.60774463804084 NA intron (NM_025542, intron 1 of 8) intron (NM_025542, intron 1 of 8) 217 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtf2 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417|Rtfdc1 replication termination factor 2 protein-coding common_peak1_48_21_0.873926524728757_4.89639488100168_1.60774463804084 chr11 59964798 59965349 + 1.60774463804084 NA promoter-TSS (NM_009026) promoter-TSS (NM_009026) -129 NM_009026 19416 Mm.3903 NM_009026 ENSMUSG00000049892 Rasd1 Dexras1 RAS, dexamethasone-induced 1 protein-coding common_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084-3 chr3 142359273 142359959 + 1.60774463804084 NA intron (NM_001190857, intron 1 of 7) AT_rich|Low_complexity|Low_complexity 32234 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_48_21_0.873926524728757_4.89639488100168_1.60774463804084 chr19 42147722 42148159 + 1.60774463804084 NA exon (NM_183195, exon 1 of 2) exon (NM_183195, exon 1 of 2) 551 NM_183195 277010 Mm.206250 NM_183195 ENSMUSG00000044345 Marveld1 AI504298|Mrvldc1 MARVEL (membrane-associating) domain containing 1 protein-coding unique_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084-2 chr17 27565188 27565659 + 1.60774463804084 NA intron (NM_001002895, intron 1 of 4) CpG 304 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251|Smim29 expressed sequence AI413582 protein-coding unique_peak1_47_21_0.844389048234708_4.88162614275465_1.60774463804084 chr10 81402206 81402579 + 1.60774463804084 NA intron (NM_026756, intron 8 of 8) intron (NM_026756, intron 8 of 8) -7183 NR_152732 102634174 Mm.392213 NR_152732 ENSMUSG00000085327 Gm16104 - predicted gene 16104 ncRNA common_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084-4 chr2 37358956 37359267 + 1.60774463804084 NA intron (NM_026176, intron 1 of 3) CpG 221 NM_026176 67466 Mm.30709 NM_026176 ENSMUSG00000009030 Pdcl 1200011E13Rik|AW108059|PhLP1 phosducin-like protein-coding common_peak2_48_21_0.873926524728757_4.89639488100168_1.60774463804084 chr1 192659376 192659810 + 1.60774463804084 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 111626 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak1_48_21_0.873926524728757_4.89639488100168_1.60774463804084-3 chr2 24975403 24975823 + 1.60774463804084 NA promoter-TSS (NM_146251) promoter-TSS (NM_146251) -420 NM_146251 241274 Mm.389243 NM_146251 ENSMUSG00000036833 Pnpla7 BC027342|E430013P11Rik|Nre patatin-like phospholipase domain containing 7 protein-coding common_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084-3 chr15 102063455 102063899 + 1.60774463804084 NA Intergenic Intergenic -10096 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding unique_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084-2 chr18 3280808 3281493 + 1.60774463804084 NA promoter-TSS (NM_001311067) promoter-TSS (NM_001311067) -18 NM_001311067 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak2_25_40_-0.932013830162971_4.8915450895366_1.60774463804084 chr10 80138507 80139423 + 1.60774463804084 NA intron (NR_036582, intron 1 of 10) CpG 402 NR_036582 100503659 Mm.485395 NM_015761 ENSMUSG00000035640 Cbarp 9630008F14|Dos|R29144/1 calcium channel, voltage-dependent, beta subunit associated regulatory protein protein-coding common_peak2_24_40_-0.988198162892532_4.86345292317182_1.60774463804084 chr11 43747657 43747946 + 1.60774463804084 NA intron (NM_133795, intron 1 of 7) CpG 172 NM_133795 66827 Mm.271974 NM_133795 ENSMUSG00000041278 Ttc1 4833412C19Rik|C79328|TPR1 tetratricopeptide repeat domain 1 protein-coding common_peak2_39_56_-0.790248050766311_5.43776598878159_1.6064785466786 chr16 78575952 78576807 + 1.6064785466786 NA 5' UTR (NM_001252438, exon 1 of 5) 5' UTR (NM_001252438, exon 1 of 5) 309 NM_001252438 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak2_39_56_-0.790248050766311_5.43776598878159_1.6064785466786-2 chr8 79711872 79712372 + 1.6064785466786 NA promoter-TSS (NM_015751) promoter-TSS (NM_015751) 273 NM_001357236 68999 Mm.257445 NM_026904 ENSMUSG00000036977 Anapc10 1500026N15Rik|A830003M23Rik|APC10 anaphase promoting complex subunit 10 protein-coding common_peak1_67_33_0.715313036512868_5.44511935950677_1.6064785466786-2 chr3 142358289 142358916 + 1.6064785466786 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 33248 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_67_33_0.715313036512868_5.44511935950677_1.6064785466786 chr18 52559130 52560043 + 1.6064785466786 NA Intergenic Intergenic -29719 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak2_67_33_0.715313036512868_5.44511935950677_1.6064785466786 chr3 142358283 142358916 + 1.6064785466786 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 33251 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_78_40_0.660015661657193_5.68755983544668_1.60607097294262-3 chr4 62408031 62408576 + 1.60607097294262 NA promoter-TSS (NM_027297) promoter-TSS (NM_027297) 320 NM_139291 66440 Mm.109930 NM_139291 ENSMUSG00000066149 Cdc26 2010012C09Rik cell division cycle 26 protein-coding common_peak2_78_40_0.660015661657193_5.68755983544668_1.60607097294262 chr13 15659977 15660561 + 1.60607097294262 NA intron (NM_008130, intron 8 of 14) intron (NM_008130, intron 8 of 14) 142361 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak1_78_40_0.660015661657193_5.68755983544668_1.60607097294262-2 chr18 12955242 12956278 + 1.60607097294262 NA Intergenic Intergenic -13919 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_47_65_-0.740573452486448_5.67410739311523_1.60607097294262-3 chr7 127841844 127842449 + 1.60607097294262 NA intron (NM_009294, intron 1 of 10) CpG 338 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding common_peak2_47_65_-0.740573452486448_5.67410739311523_1.60607097294262-2 chr7 98486960 98487639 + 1.60607097294262 NA Intergenic Intergenic -6923 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_47_65_-0.740573452486448_5.67410739311523_1.60607097294262 chr2 101796629 101797501 + 1.60607097294262 NA intron (NM_001355625, intron 1 of 8) CpG 642 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_78_40_0.660015661657193_5.68755983544668_1.60607097294262-4 chr4 105363368 105364112 + 1.60607097294262 NA Intergenic Intergenic 206393 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_78_40_0.660015661657193_5.68755983544668_1.60607097294262 chr10 94514333 94515505 + 1.60607097294262 NA promoter-TSS (NM_172051) promoter-TSS (NM_172051) 62 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_103_56_0.578538201143883_6.12215911473668_1.60550269793887-2 chr8 111708735 111710364 + 1.60550269793887 NA TTS (NM_009954) TTS (NM_009954) -18539 NM_025583 66473 Mm.34374 NM_025583 ENSMUSG00000031957 Ctrb1 2200008D09Rik|AI504462|Ctrb|Prt-2 chymotrypsinogen B1 protein-coding common_peak2_67_85_-0.62348887693889_6.11452031623265_1.60550269793887 chr6 90357797 90359264 + 1.60550269793887 NA intron (NM_144940, intron 17 of 19) intron (NM_144940, intron 17 of 19) -10964 NM_173002 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_103_56_0.578538201143883_6.12215911473668_1.60550269793887 chr3 36480904 36482256 + 1.60550269793887 NA intron (NM_028183, intron 2 of 2) intron (NM_028183, intron 2 of 2) 5643 NM_028183 72282 Mm.55317 NM_028183 ENSMUSG00000027713 1810062G17Rik - RIKEN cDNA 1810062G17 gene protein-coding common_peak1_116_65_0.535760279978325_6.31227425934762_1.60529981002129 chr8 84988943 84990294 + 1.60529981002129 NA promoter-TSS (NM_001167991) promoter-TSS (NM_001167991) -977 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_117_65_0.547951986390982_6.31837011255394_1.60529981002129 chr3 103279733 103281145 + 1.60529981002129 NA exon (NM_053170, exon 1 of 20) exon (NM_053170, exon 1 of 20) 1146 NM_053170 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak2_117_133_-0.473743084708337_6.8292176481036_1.60488016730232 chr15 77305813 77307020 + 1.60488016730232 NA exon (NM_001110827, exon 1 of 14) exon (NM_001110827, exon 1 of 14) 637 NM_001110827 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak1_309_200_0.324944787981245_7.81352408516955_1.60295091078399 chr3 104788742 104791261 + 1.60295091078399 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 967 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak1_369_363_-0.278341939107108_8.36862367064514_1.60292909252645 chr3 88138151 88141530 + 1.60292909252645 NA Intergenic RSINE1|SINE|B4 -2532 NM_001310593 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak1_138_154_-0.449147353891151_7.05155072832866_1.60228809506875 chr17 26613077 26614881 + 1.60228809506875 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 52467 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_138_154_-0.449147353891151_7.05155072832866_1.60228809506875-2 chr18 75385371 75387342 + 1.60228809506875 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 18991 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_138_80_0.487127048498462_6.58341352713385_1.6016655597258 chr11 88047768 88049069 + 1.6016655597258 NA intron (NM_001078167, intron 1 of 2) CpG 1045 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding common_peak1_138_80_0.487127048498462_6.58341352713385_1.6016655597258-2 chr9 62559448 62560017 + 1.6016655597258 NA Intergenic Intergenic -22688 NM_175484 235431 Mm.335229 NM_175484 ENSMUSG00000041729 Coro2b CLIPINC|E130012P22Rik coronin, actin binding protein, 2B protein-coding common_peak1_97_114_-0.519186887151564_6.58589660736859_1.60166555972577 chr9 6643469 6644663 + 1.60166555972577 NA Intergenic Intergenic -377519 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_131_75_0.505028511807684_6.50044176934743_1.60033012847202 chr15 100550858 100552033 + 1.60033012847202 NA exon (NM_033476, exon 2 of 16) exon (NM_033476, exon 2 of 16) 563 NM_033476 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding common_peak2_91_108_-0.532386002553915_6.50199132349997_1.60033012847202 chr19 47579242 47580856 + 1.60033012847202 NA promoter-TSS (NM_009289) promoter-TSS (NM_009289) 30 NM_001164639 20874 Mm.281011 NM_009289 ENSMUSG00000025060 Slk 9A2|AV021402|AW411554|Etk4|SMAK|Stk2|mKIAA0204|mSLK STE20-like kinase protein-coding common_peak2_53_70_-0.677200268604523_5.81114698520242_1.60007701539021-2 chr9 56106766 56107491 + 1.60007701539021 NA intron (NM_011193, intron 1 of 14) B2_Mm2|SINE|B2 17152 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_85_44_0.647334454306514_5.81552032348293_1.60007701539021 chr15 89168939 89169523 + 1.60007701539021 NA intron (NM_001159521, intron 3 of 37) intron (NM_001159521, intron 3 of 37) 4720 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_84_44_0.630579680187411_5.80714293642338_1.60007701539021 chr6 142289697 142290464 + 1.60007701539021 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) -8345 NM_010491 15874 Mm.415 NM_010491 ENSMUSG00000041681 Iapp DAP islet amyloid polypeptide protein-coding common_peak1_85_44_0.647334454306514_5.81552032348293_1.60007701539021 chr2 31255637 31256629 + 1.60007701539021 NA intron (NM_019681, intron 1 of 7) intron (NM_019681, intron 1 of 7) 10210 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak2_52_70_-0.703977064234822_5.79775858738727_1.60007701539021 chr16 24914200 24915383 + 1.60007701539021 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -144848 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_53_70_-0.677200268604523_5.81114698520242_1.60007701539021 chr2 91730213 91730802 + 1.60007701539021 NA intron (NM_001080754, intron 1 of 18) GC_rich|Low_complexity|Low_complexity 369 NM_001080754 228361 Mm.436667 NM_172669 ENSMUSG00000040506 Ambra1 2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736 autophagy/beclin 1 regulator 1 protein-coding common_peak1_62_30_0.739173987859959_5.32378330431685_1.5985652552451 chr11 32454516 32455207 + 1.5985652552451 NA promoter-TSS (NM_001361561) promoter-TSS (NM_001361561) -509 NM_001361561 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_62_30_0.739173987859959_5.32378330431685_1.5985652552451-2 chr11 53308429 53308983 + 1.5985652552451 NA Intergenic Intergenic -8227 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak1_62_30_0.739173987859959_5.32378330431685_1.5985652552451-3 chr9 58306026 58307090 + 1.5985652552451 NA intron (NM_010729, intron 1 of 6) MIRc|SINE|MIR 6654 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding unique_peak1_62_30_0.739173987859959_5.32378330431685_1.5985652552451 chr9 44517682 44518381 + 1.5985652552451 NA intron (NM_007551, intron 1 of 1) intron (NM_007551, intron 1 of 1) 8390 NM_007551 12145 Mm.6246 NM_007551 ENSMUSG00000047880 Cxcr5 Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15 chemokine (C-X-C motif) receptor 5 protein-coding common_peak1_62_30_0.739173987859959_5.32378330431685_1.5985652552451-4 chr9 63377371 63377916 + 1.5985652552451 NA 5' UTR (NM_011840, exon 1 of 22) 5' UTR (NM_011840, exon 1 of 22) 209 NM_011840 23938 Mm.325746 NM_011840 ENSMUSG00000058444 Map2k5 AI324775|AI428457|MEK5|Mapkk5|Prkmk5 mitogen-activated protein kinase kinase 5 protein-coding common_peak1_90_48_0.60543240034079_5.9174260442856_1.59856490369343-6 chr7 142371298 142372192 + 1.59856490369343 NA intron (NM_001347541, intron 1 of 2) intron (NM_001347541, intron 1 of 2) 514 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_90_48_0.60543240034079_5.9174260442856_1.59856490369343-2 chr14 28035393 28036591 + 1.59856490369343 NA intron (NM_001347497, intron 12 of 19) intron (NM_001347497, intron 12 of 19) 413585 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding common_peak2_58_75_-0.648526428120905_5.92366429938313_1.59856490369343 chr12 111946042 111946864 + 1.59856490369343 NA Intergenic Intergenic -1971 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA unique_peak1_91_48_0.621088478107803_5.92525408316911_1.59856490369343 chr8 124301941 124302733 + 1.59856490369343 NA intron (NM_139272, intron 2 of 15) intron (NM_139272, intron 2 of 15) 70943 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_91_48_0.621088478107803_5.92525408316911_1.59856490369343 chr7 109577242 109578240 + 1.59856490369343 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 38827 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_90_48_0.60543240034079_5.9174260442856_1.59856490369343 chr12 3310179 3310925 + 1.59856490369343 NA promoter-TSS (NM_016676) promoter-TSS (NM_016676) -583 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_90_48_0.60543240034079_5.9174260442856_1.59856490369343-5 chr2 26146502 26147663 + 1.59856490369343 NA Intergenic GA-rich|Low_complexity|Low_complexity -6576 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak1_90_48_0.60543240034079_5.9174260442856_1.59856490369343-4 chr18 20895620 20896381 + 1.59856490369343 NA promoter-TSS (NM_029491) promoter-TSS (NM_029491) 78 NM_029491 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak1_57_75_-0.673014492066319_5.91142026741043_1.59856490369343 chr12 80643143 80643758 + 1.59856490369343 NA promoter-TSS (NM_026244) promoter-TSS (NM_026244) 661 NM_007951 13877 Mm.246551 NM_007951 ENSMUSG00000021131 Erh Mer|Prei1 ERH mRNA splicing and mitosis factor protein-coding common_peak1_90_48_0.60543240034079_5.9174260442856_1.59856490369343-3 chr15 13365650 13366504 + 1.59856490369343 NA Intergenic Intergenic -192402 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_155_91_0.468701861479067_6.75791288679655_1.59789270723402 chr3 90508369 90509511 + 1.59789270723402 NA intron (NM_001293777, intron 1 of 5) intron (NM_001293777, intron 1 of 5) 558 NM_001293776 66511 Mm.154136 NM_023215 ENSMUSG00000001017 Chtop 2500003M10Rik|Fop|Srag chromatin target of PRMT1 protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-3 chr16 45375304 45376254 + 1.59745120326141 NA Intergenic Intergenic 33274 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_53_24_0.828690661125435_5.05820152033744_1.59745120326141 chr11 93940263 93940967 + 1.59745120326141 NA intron (NM_134012, intron 15 of 15) intron (NM_134012, intron 15 of 15) 15168 NM_001077529 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-6 chr4 133378668 133379346 + 1.59745120326141 NA intron (NM_016981, intron 1 of 11) intron (NM_016981, intron 1 of 11) 9231 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak1_53_24_0.828690661125435_5.05820152033744_1.59745120326141-3 chr7 110245310 110246134 + 1.59745120326141 NA intron (NM_009302, intron 2 of 11) RSINE1|SINE|B4 24019 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_53_24_0.828690661125435_5.05820152033744_1.59745120326141-2 chr2 37430161 37430708 + 1.59745120326141 NA intron (NM_146253, intron 1 of 1) intron (NM_146253, intron 1 of 1) 485 NM_146253 241322 Mm.330182 NM_146253 ENSMUSG00000066798 Zbtb6 A830092L04Rik|ZID|Zfp482 zinc finger and BTB domain containing 6 protein-coding unique_peak1_53_24_0.828690661125435_5.05820152033744_1.59745120326141 chr14 55634889 55635608 + 1.59745120326141 NA TTS (NM_028780) TTS (NM_028780) 436 NR_153401 75751 Mm.27546 NM_024267 ENSMUSG00000002319 Ipo4 8430408O15Rik|AA409693|Imp4a|RanBP4 importin 4 protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-8 chr9 51962757 51963375 + 1.59745120326141 NA intron (NM_007996, intron 1 of 3) intron (NM_007996, intron 1 of 3) 536 NM_001301728 14148 Mm.1061 NM_007996 ENSMUSG00000032051 Fdx1 - ferredoxin 1 protein-coding common_peak1_28_44_-0.909885095379164_5.03691054864009_1.59745120326141 chr10 45067344 45067618 + 1.59745120326141 NA intron (NM_011156, intron 1 of 14) CpG 267 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-4 chr2 122738663 122739255 + 1.59745120326141 NA intron (NM_019788, intron 1 of 4) intron (NM_019788, intron 1 of 4) 454 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding common_peak2_53_24_0.828690661125435_5.05820152033744_1.59745120326141-2 chr12 108423286 108423655 + 1.59745120326141 NA intron (NM_001043335, intron 1 of 21) CpG 654 NM_001043335 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_53_24_0.828690661125435_5.05820152033744_1.59745120326141 chr11 32267375 32267613 + 1.59745120326141 NA exon (NM_181569, exon 1 of 13) exon (NM_181569, exon 1 of 13) 213 NM_181569 17168 Mm.263161 NM_181569 ENSMUSG00000020289 Nprl3 Aag|CGTHBA|HS-26|HS-40|Mare|Phg|Prox1|m(alpha)RE nitrogen permease regulator-like 3 protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141 chr13 45402707 45403292 + 1.59745120326141 NA intron (NM_153789, intron 2 of 6) intron (NM_153789, intron 2 of 6) 13257 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-2 chr15 41728477 41729177 + 1.59745120326141 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -60168 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_28_44_-0.909885095379164_5.03691054864009_1.59745120326141 chr5 77405387 77406041 + 1.59745120326141 NA intron (NM_001159518, intron 1 of 5) intron (NM_001159518, intron 1 of 5) 2331 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_52_24_0.801913865495136_5.04481312252229_1.59745120326141 chr19 10881911 10882332 + 1.59745120326141 NA promoter-TSS (NM_134142) promoter-TSS (NM_134142) -378 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-5 chr3 87617642 87617969 + 1.59745120326141 NA 5' UTR (NM_001003912, exon 1 of 40) 5' UTR (NM_001003912, exon 1 of 40) 246 NM_001360195 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding unique_peak2_28_44_-0.909885095379164_5.03691054864009_1.59745120326141-2 chr7 34196316 34196812 + 1.59745120326141 NA exon (NM_001360710, exon 1 of 6) exon (NM_001360710, exon 1 of 6) 106 NM_026549 68079 Mm.38173 NM_026549 ENSMUSG00000002635 Pdcd2l 6030457N17Rik programmed cell death 2-like protein-coding common_peak1_52_24_0.801913865495136_5.04481312252229_1.59745120326141-7 chr8 75090118 75090595 + 1.59745120326141 NA Intergenic Intergenic -3262 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak1_53_24_0.828690661125435_5.05820152033744_1.59745120326141-4 chrX 7573482 7574276 + 1.59745120326141 NA exon (NM_001290574, exon 1 of 4) exon (NM_001290574, exon 1 of 4) 279 NR_029473 78185 Mm.160055 NR_029473 ENSMUSG00000039545 Flicr 4930524L23Rik|Ppp1r3fos Foxp3 regulating long intergenic noncoding RNA ncRNA common_peak1_216_134_0.388238012502837_7.27093460330225_1.59618878673968 chr12 70825519 70827234 + 1.59618878673968 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 862 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_57_27_0.767558099319663_5.19113397171744_1.59508594240593-4 chr8 70505279 70506162 + 1.59508594240593 NA intron (NR_151646, intron 2 of 3) intron (NR_151646, intron 2 of 3) 706 NR_151646 66462 Mm.28242 NM_025577 ENSMUSG00000058833 Rex1bd 2810428I15Rik required for excision 1-B domain containing protein-coding common_peak1_58_27_0.792046163265076_5.20337800369014_1.59508594240593 chr11 5856138 5856837 + 1.59508594240593 NA Intergenic Intergenic -5379 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak1_57_27_0.767558099319663_5.19113397171744_1.59508594240593-2 chr9 15279160 15279852 + 1.59508594240593 NA intron (NM_144933, intron 1 of 11) intron (NM_144933, intron 1 of 11) 361 NM_144933 234959 Mm.44151 NM_144933 ENSMUSG00000031935 Med17 77kDa|C330002H14Rik|Crsp6|Trap80 mediator complex subunit 17 protein-coding common_peak2_57_27_0.767558099319663_5.19113397171744_1.59508594240593 chr3 54479879 54480288 + 1.59508594240593 NA Intergenic Intergenic 118976 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_57_27_0.767558099319663_5.19113397171744_1.59508594240593-3 chr3 145888486 145889065 + 1.59508594240593 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -35487 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_32_48_-0.84764385971745_5.19088791425648_1.59508594240593 chr1 59119870 59120477 + 1.59508594240593 NA promoter-TSS (NM_001037812) promoter-TSS (NM_001037812) -77 NM_001033449 381259 Mm.261275 NM_001033449 ENSMUSG00000038079 Tmem237 AI853305|Als2cr4|Gm972 transmembrane protein 237 protein-coding common_peak1_58_27_0.792046163265076_5.20337800369014_1.59508594240593-2 chr6 52230607 52231175 + 1.59508594240593 NA promoter-TSS (NR_029912) promoter-TSS (NR_029912) -726 NR_029912 723820 NR_029912 ENSMUSG00000065443 Mir196b Mirn196b|mir-196b microRNA 196b ncRNA unique_peak1_57_27_0.767558099319663_5.19113397171744_1.59508594240593 chr8 107402774 107404268 + 1.59508594240593 NA promoter-TSS (NM_008706) promoter-TSS (NM_008706) -316 NM_008706 18104 Mm.252 NM_008706 ENSMUSG00000003849 Nqo1 AV001255|Dia4|Dtd|Nmo-1|Nmo1|Nmor1|Ox-1|Ox1|Qr1 NAD(P)H dehydrogenase, quinone 1 protein-coding common_peak1_57_27_0.767558099319663_5.19113397171744_1.59508594240593-2 chr19 5749837 5750370 + 1.59508594240593 NA intron (NM_008520, intron 12 of 27) intron (NM_008520, intron 12 of 27) 9199 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak2_32_48_-0.84764385971745_5.19088791425648_1.59508594240593 chr11 3123724 3124126 + 1.59508594240593 NA promoter-TSS (NR_003517) promoter-TSS (NR_003517) -96 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak1_57_27_0.767558099319663_5.19113397171744_1.59508594240593 chr14 11612817 11613310 + 1.59508594240593 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 59510 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak2_58_27_0.792046163265076_5.20337800369014_1.59508594240593 chr14 47649596 47649931 + 1.59508594240593 NA intron (NM_001347528, intron 1 of 37) CpG 452 NM_001347524 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding common_peak2_181_193_-0.386825577304373_7.40650005353494_1.59430979759379 chr5 77366470 77368809 + 1.59430979759379 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 40406 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-9 chr8 110818946 110819384 + 1.59386218057211 NA intron (NM_133953, intron 17 of 25) intron (NM_133953, intron 17 of 25) -13241 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211 chr15 97811928 97812228 + 1.59386218057211 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 2785 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-5 chr5 86245414 86246111 + 1.59386218057211 NA intron (NM_001030297, intron 5 of 9) B1_Mur1|SINE|Alu 43546 NM_001030297 435845 Mm.359654 NM_001030297 ENSMUSG00000061184 Tmprss11c Tmprss13 transmembrane protease, serine 11c protein-coding unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211 chr1 151167437 151167882 + 1.59386218057211 NA Intergenic Intergenic 29625 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-4 chr18 4735439 4736004 + 1.59386218057211 NA Intergenic Intergenic -76765 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA common_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-2 chr7 49500094 49500673 + 1.59386218057211 NA intron (NM_175272, intron 11 of 37) intron (NM_175272, intron 11 of 37) 136452 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-7 chr8 123805385 123805789 + 1.59386218057211 NA promoter-TSS (NM_009003) promoter-TSS (NM_009003) -409 NM_009003 19341 Mm.9221 NM_009003 ENSMUSG00000019478 Rab4a AI848268|Rab4 RAB4A, member RAS oncogene family protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-4 chr19 42073838 42074455 + 1.59386218057211 NA TTS (NM_198108) TTS (NM_198108) 12224 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-2 chr15 71852963 71853354 + 1.59386218057211 NA intron (NM_027174, intron 46 of 63) intron (NM_027174, intron 46 of 63) -125320 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211 chr11 55460379 55460957 + 1.59386218057211 NA intron (NM_009720, intron 1 of 3) intron (NM_009720, intron 1 of 3) 540 NM_009720 11927 Mm.217759 NM_009720 ENSMUSG00000018585 Atox1 AI256639|Atx1 antioxidant 1 copper chaperone protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-5 chr2 52967841 52968439 + 1.59386218057211 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 110272 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-8 chr6 115901379 115901831 + 1.59386218057211 NA intron (NM_001167763, intron 15 of 28) intron (NM_001167763, intron 15 of 28) -30322 NM_145383 212541 Mm.2965 NM_145383 ENSMUSG00000030324 Rho Noerg1|Opn2|Ops|RP4 rhodopsin protein-coding common_peak1_16_30_-1.13731047347718_4.38554107364829_1.59386218057211 chr4 138463537 138463766 + 1.59386218057211 NA Intergenic Intergenic 8503 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-3 chr7 84503572 84504062 + 1.59386218057211 NA Intergenic Intergenic -25137 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-6 chr2 125217747 125218198 + 1.59386218057211 NA intron (NM_001079690, intron 23 of 27) intron (NM_001079690, intron 23 of 27) -29276 NM_001159646 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-3 chr19 15984502 15984874 + 1.59386218057211 NA promoter-TSS (NR_045355) promoter-TSS (NR_045355) 301 NM_198019 208518 Mm.105652 NM_198019 ENSMUSG00000041491 Cep78 5730599I05Rik|D030027P05 centrosomal protein 78 protein-coding common_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-2 chr16 23272383 23272682 + 1.59386218057211 NA intron (NM_001252505, intron 2 of 7) intron (NM_001252505, intron 2 of 7) -17938 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-3 chr16 85135130 85135968 + 1.59386218057211 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 38158 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-7 chr4 156032324 156032964 + 1.59386218057211 NA Intergenic Intergenic 6322 NM_021985 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding common_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211 chr18 75683186 75683696 + 1.59386218057211 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 14255 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak2_16_30_-1.13731047347718_4.38554107364829_1.59386218057211-6 chr6 29467932 29468360 + 1.59386218057211 NA intron (NM_025381, intron 1 of 1) intron (NM_025381, intron 1 of 1) 363 NM_025381 66144 Mm.371614 NM_025381 ENSMUSG00000004285 Atp6v1f 1110004G16Rik ATPase, H+ transporting, lysosomal V1 subunit F protein-coding unique_peak1_35_14_0.984820653064186_4.39930092214061_1.59386218057211-2 chr17 53577088 53577507 + 1.59386218057211 NA intron (NR_151733, intron 1 of 16) intron (NR_151733, intron 1 of 16) -6829 NM_001190846 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_104_121_-0.505600722362872_6.67793697638145_1.59227420376343 chr11 102295541 102296839 + 1.59227420376343 NA intron (NM_001098836, intron 1 of 12) CpG 439 NM_001098836 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding common_peak1_180_109_0.423834876533467_6.99327715179139_1.59114833914605 chr17 35866170 35867522 + 1.59114833914605 NA 5' UTR (NM_175242, exon 1 of 3) 5' UTR (NM_175242, exon 1 of 3) 231 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-16 chr4 149445050 149445364 + 1.59083646988122 NA Intergenic Intergenic 9761 NM_022020 63954 Mm.46023 NM_022020 ENSMUSG00000028996 Rbp7 1110002J23Rik|CRBP-III retinol binding protein 7, cellular protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122 chr1 171375794 171376426 + 1.59083646988122 NA intron (NM_001122680, intron 1 of 7) (GGA)n|Simple_repeat|Simple_repeat 5937 NM_001122680 71740 Mm.263414 NM_027893 ENSMUSG00000006411 Nectin4 1200017F15Rik|Prr4|Pvrl4 nectin cell adhesion molecule 4 protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-7 chr2 93443120 93443668 + 1.59083646988122 NA 5' UTR (NM_001136055, exon 2 of 10) 5' UTR (NM_001136055, exon 2 of 10) 9278 NM_001271462 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-5 chr17 79343608 79344086 + 1.59083646988122 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 11244 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-15 chr4 136407712 136408215 + 1.59083646988122 NA Intergenic Intergenic -15561 NM_001285482 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-8 chr17 35777382 35777623 + 1.59083646988122 NA intron (NR_045459, intron 2 of 2) intron (NR_045459, intron 2 of 2) 5052 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-19 chr9 32705763 32706262 + 1.59083646988122 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 9970 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-9 chr8 31376745 31377215 + 1.59083646988122 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 9231 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-11 chr3 84952289 84952610 + 1.59083646988122 NA exon (NM_080428, exon 1 of 11) exon (NM_080428, exon 1 of 11) 238 NM_080428 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-6 chr19 25462369 25462823 + 1.59083646988122 NA Intergenic Intergenic -43110 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-5 chr14 25480771 25481233 + 1.59083646988122 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 21817 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-4 chr15 11828500 11828875 + 1.59083646988122 NA Intergenic Intergenic 76987 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-2 chr12 5213294 5213804 + 1.59083646988122 NA intron (NM_001164493, intron 2 of 13) intron (NM_001164493, intron 2 of 13) 162133 NM_001164493 208439 Mm.388281 NM_001164493 ENSMUSG00000020627 Klhl29 A230106N14Rik|Gm68|Kbtbd9|mKIAA1921 kelch-like 29 protein-coding common_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-2 chr5 138755949 138756405 + 1.59083646988122 NA exon (NM_030565, exon 1 of 10) exon (NM_030565, exon 1 of 10) 1096 NM_001359593 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-3 chr12 86895155 86895603 + 1.59083646988122 NA Intergenic Intergenic -10565 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122 chr12 85474543 85474949 + 1.59083646988122 NA intron (NM_010234, intron 1 of 3) CpG 856 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-7 chr17 29033509 29034046 + 1.59083646988122 NA intron (NR_036613, intron 1 of 6) intron (NR_036613, intron 1 of 6) 1117 NR_036613 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-2 chr11 100289062 100289510 + 1.59083646988122 NA Intergenic Intergenic -19415 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-4 chr13 62964899 62965296 + 1.59083646988122 NA intron (NM_001289926, intron 1 of 15) CpG 204 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-21 chr9 67632283 67632853 + 1.59083646988122 NA Intergenic Intergenic -72865 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-12 chr3 90080963 90081416 + 1.59083646988122 NA intron (NM_001357581, intron 1 of 8) intron (NM_001357581, intron 1 of 8) 1668 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122 chr11 117843352 117843908 + 1.59083646988122 NA Intergenic Intergenic -5607 NM_001012273 11799 Mm.8552 NM_009689 ENSMUSG00000017716 Birc5 AAC-11|Api4|TIAP|survivin40 baculoviral IAP repeat-containing 5 protein-coding common_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122 chr9 58436611 58436949 + 1.59083646988122 NA Intergenic Intergenic -18393 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-10 chr19 28180022 28180300 + 1.59083646988122 NA Intergenic Intergenic -168995 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-10 chr9 29341491 29341947 + 1.59083646988122 NA intron (NM_001357601, intron 1 of 7) intron (NM_001357601, intron 1 of 7) 70966 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-20 chr9 57949235 57949800 + 1.59083646988122 NA intron (NM_011352, intron 1 of 13) intron (NM_011352, intron 1 of 13) 9382 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-14 chr4 107493612 107493899 + 1.59083646988122 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 59036 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-9 chr18 33658766 33659116 + 1.59083646988122 NA Intergenic Intergenic -135951 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-18 chr7 126428513 126428895 + 1.59083646988122 NA promoter-TSS (NM_030566) promoter-TSS (NM_030566) -63 NM_030566 70314 Mm.35467 NM_030566 ENSMUSG00000030727 Rabep2 2610011A08Rik|AI462746|Fra rabaptin, RAB GTPase binding effector protein 2 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-6 chr15 83431924 83432179 + 1.59083646988122 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 799 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-13 chr4 55532135 55532489 + 1.59083646988122 NA 5' UTR (NM_010637, exon 1 of 5) 5' UTR (NM_010637, exon 1 of 5) 163 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak2_11_24_-1.32592556375623_3.98089340789661_1.59083646988122-8 chr8 22681356 22681615 + 1.59083646988122 NA intron (NM_001159774, intron 7 of 21) intron (NM_001159774, intron 7 of 21) 25098 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-3 chr7 118508178 118508535 + 1.59083646988122 NA Intergenic PB1D10|SINE|Alu -16381 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-17 chr6 142349070 142349500 + 1.59083646988122 NA intron (NM_183165, intron 3 of 11) intron (NM_183165, intron 3 of 11) 3588 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak1_28_10_1.12253638231321_4.0206998097939_1.59083646988122-3 chr12 111454522 111454792 + 1.59083646988122 NA 3' UTR (NM_009396, exon 12 of 12) 3' UTR (NM_009396, exon 12 of 12) 11996 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_289_186_0.333565501097021_7.71367721043615_1.59047418551531 chr8 19784751 19785439 + 1.59047418551531 NA intron (NM_001270553, intron 6 of 9) CpG 55519 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak1_73_37_0.675978248040613_5.58591663746389_1.59039787900524 chr11 104631657 104632825 + 1.59039787900524 NA exon (NM_016780, exon 3 of 15) exon (NM_016780, exon 3 of 15) 24241 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_73_37_0.675978248040613_5.58591663746389_1.59039787900524-2 chr4 148527326 148527890 + 1.59039787900524 NA intron (NM_020009, intron 34 of 57) intron (NM_020009, intron 34 of 57) -27146 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak2_79_97_-0.579122860290022_6.3251484139702_1.58909774063682 chr2 148856156 148857414 + 1.58909774063682 NA Intergenic Intergenic -5851 NM_029960 77705 Mm.159975 NM_029960 ENSMUSG00000027446 9230104L09Rik mCST E2 RIKEN cDNA 9230104L09 gene protein-coding common_peak1_79_97_-0.579122860290022_6.3251484139702_1.58909774063682 chr9 75558668 75559583 + 1.58909774063682 NA intron (NM_001357828, intron 1 of 10) intron (NM_001357828, intron 1 of 10) 532 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak1_98_115_-0.517134388075603_6.59941380108977_1.588257329771 chr15 5514585 5515901 + 1.588257329771 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 18925 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_98_115_-0.517134388075603_6.59941380108977_1.588257329771 chr17 13682922 13683712 + 1.588257329771 NA Intergenic Intergenic -77224 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak1_191_202_-0.375625209459659_7.47752331245535_1.5880588763763 chr12 101975187 101977000 + 1.5880588763763 NA 5' UTR (NM_016856, exon 1 of 15) 5' UTR (NM_016856, exon 1 of 15) 119 NM_016856 51786 Mm.716 NM_016856 ENSMUSG00000041781 Cpsf2 100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367 cleavage and polyadenylation specific factor 2 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-20 chr18 15000584 15000783 + 1.58711810488664 NA intron (NR_045372, intron 3 of 4) intron (NR_045372, intron 3 of 4) 11688 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-87 chrX 95964203 95964405 + 1.58711810488664 NA Intergenic Intergenic -7330 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-11 chr12 29021687 29021936 + 1.58711810488664 NA intron (NR_154989, intron 1 of 2) intron (NR_154989, intron 1 of 2) 111582 NR_154989 102633758 Mm.110243 NR_154989 Gm31508 - predicted gene, 31508 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-21 chr12 40116215 40116418 + 1.58711810488664 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 17912 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-25 chr19 34251428 34251648 + 1.58711810488664 NA intron (NM_007392, intron 3 of 8) intron (NM_007392, intron 3 of 8) 3835 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-37 chr9 43235559 43235823 + 1.58711810488664 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 4125 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-81 chr9 57836504 57836719 + 1.58711810488664 NA Intergenic CpG -2377 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-51 chr2 167872577 167872842 + 1.58711810488664 NA Intergenic MIR|SINE|MIR -59618 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-7 chr11 100321811 100322063 + 1.58711810488664 NA 3' UTR (NM_011508, exon 4 of 4) 3' UTR (NM_011508, exon 4 of 4) 1988 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-72 chr7 101044160 101044392 + 1.58711810488664 NA Intergenic Intergenic -32223 NM_001302346 18442 Mm.3000 NM_008773 ENSMUSG00000032860 P2ry2 P2U1|P2Y2 purinergic receptor P2Y, G-protein coupled 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-39 chr16 43655643 43655869 + 1.58711810488664 NA intron (NM_001146325, intron 3 of 3) intron (NM_001146325, intron 3 of 3) 8428 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-3 chr1 82637001 82637244 + 1.58711810488664 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 50201 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-67 chr5 144125861 144126186 + 1.58711810488664 NA intron (NM_001081109, intron 1 of 13) intron (NM_001081109, intron 1 of 13) 25587 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding common_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-2 chr4 88003567 88003818 + 1.58711810488664 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 29715 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-33 chr6 142301364 142301586 + 1.58711810488664 NA intron (NM_010491, intron 2 of 2) intron (NM_010491, intron 2 of 2) 3050 NM_010491 15874 Mm.415 NM_010491 ENSMUSG00000041681 Iapp DAP islet amyloid polypeptide protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-22 chr12 75549033 75549275 + 1.58711810488664 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 47046 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-65 chr5 124253181 124253501 + 1.58711810488664 NA non-coding (NR_102690, exon 23 of 23) non-coding (NR_102690, exon 23 of 23) -3581 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-42 chr17 14202904 14203182 + 1.58711810488664 NA intron (NM_172826, intron 1 of 3) CpG 788 NM_172826 240025 Mm.79993 NM_172826 ENSMUSG00000048826 Dact2 2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2 dishevelled-binding antagonist of beta-catenin 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-8 chr1 171379554 171379807 + 1.58711810488664 NA intron (NM_001122680, intron 1 of 7) intron (NM_001122680, intron 1 of 7) -9280 NM_001005508 226652 Mm.251048 NM_001005508 ENSMUSG00000048865 Arhgap30 6030405P05Rik|Gm102|mFLJ00267 Rho GTPase activating protein 30 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-52 chr2 173992419 173992617 + 1.58711810488664 NA Intergenic Intergenic -84533 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-48 chr2 104849637 104849870 + 1.58711810488664 NA promoter-TSS (NM_178695) promoter-TSS (NM_178695) 97 NM_178695 228413 Mm.259609 NM_178695 ENSMUSG00000027171 Prrg4 9930111I18Rik|TMG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-30 chr14 44832720 44833005 + 1.58711810488664 NA Intergenic Intergenic 26513 NM_008962 19214 Mm.5105 NM_008962 ENSMUSG00000071489 Ptgdr DP|PGD prostaglandin D receptor protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-36 chr8 121283452 121283710 + 1.58711810488664 NA Intergenic Intergenic 155896 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-13 chr10 86176313 86176672 + 1.58711810488664 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 80638 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-5 chr7 67619684 67619924 + 1.58711810488664 NA intron (NR_028144, intron 2 of 8) B3|SINE|B2 25432 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-73 chr8 4320435 4320695 + 1.58711810488664 NA intron (NM_010485, intron 1 of 5) intron (NM_010485, intron 1 of 5) 4535 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-86 chr9 107888678 107888957 + 1.58711810488664 NA intron (NM_028369, intron 1 of 5) intron (NM_028369, intron 1 of 5) 688 NM_028369 72825 Mm.38037 NM_028369 ENSMUSG00000032583 Mon1a 2810468K17Rik MON1 homolog A, secretory traffciking associated protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-28 chr13 109237434 109237672 + 1.58711810488664 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -87191 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-62 chr5 50033512 50033763 + 1.58711810488664 NA intron (NM_133911, intron 1 of 18) intron (NM_133911, intron 1 of 18) 25359 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-14 chr12 104983835 104984054 + 1.58711810488664 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 14733 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-43 chr18 24787465 24787719 + 1.58711810488664 NA intron (NM_001289654, intron 3 of 24) intron (NM_001289654, intron 3 of 24) 78969 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-75 chr8 31314990 31315268 + 1.58711810488664 NA Intergenic Intergenic -52620 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-3 chr5 77308997 77309216 + 1.58711810488664 NA exon (NM_019836, exon 1 of 7) exon (NM_019836, exon 1 of 7) 980 NM_019836 56412 Mm.129136 NM_019836 ENSMUSG00000036285 Noa1 2610024G14Rik|AU022345|AtNOS1|mAtNOS1 nitric oxide associated 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-68 chr6 17549416 17549612 + 1.58711810488664 NA intron (NM_008591, intron 15 of 21) intron (NM_008591, intron 15 of 21) 85557 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-13 chr12 53889065 53889271 + 1.58711810488664 NA intron (NM_013780, intron 5 of 11) intron (NM_013780, intron 5 of 11) 314706 NM_028133 112407 Mm.133037 NM_028133 ENSMUSG00000035105 Egln3 2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20 egl-9 family hypoxia-inducible factor 3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-55 chr3 137552173 137552471 + 1.58711810488664 NA intron (NM_177665, intron 1 of 2) intron (NM_177665, intron 1 of 2) 300 NM_177665 229862 Mm.246591 NM_177665 ENSMUSG00000055138 Gm4861 9230109N16|EG229862 predicted gene 4861 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-32 chr5 140175258 140175512 + 1.58711810488664 NA promoter-TSS (NM_001359027) promoter-TSS (NM_001359027) -467 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-45 chr19 11915151 11915405 + 1.58711810488664 NA intron (NM_172635, intron 2 of 18) B1_Mus1|SINE|Alu 2879 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-38 chr16 34758172 34758470 + 1.58711810488664 NA Intergenic Intergenic -26629 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-85 chr9 98155685 98155959 + 1.58711810488664 NA Intergenic Intergenic -122655 NM_022319 64085 Mm.440903 NM_022319 ENSMUSG00000032452 Clstn2 2900042C18Rik|AI448973|CSTN2|Cs2|Cst-2|mKIAA4134 calsyntenin 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-23 chr12 108333465 108333659 + 1.58711810488664 NA promoter-TSS (NM_010010) promoter-TSS (NM_010010) -754 NM_010010 13116 Mm.41911 NM_010010 ENSMUSG00000021259 Cyp46a1 CH24H|Cyp46 cytochrome P450, family 46, subfamily a, polypeptide 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-74 chr8 24395277 24395501 + 1.58711810488664 NA Intergenic Intergenic 43557 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-44 chr18 50097694 50098058 + 1.58711810488664 NA Intergenic Intergenic -30325 NM_008292 15488 Mm.277857 NM_008292 ENSMUSG00000024507 Hsd17b4 17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2 hydroxysteroid (17-beta) dehydrogenase 4 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-17 chr11 51920792 51921048 + 1.58711810488664 NA Intergenic B3|SINE|B2 -46711 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-9 chr10 7027194 7027384 + 1.58711810488664 NA intron (NM_001039652, intron 5 of 5) intron (NM_001039652, intron 5 of 5) -4104 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-35 chr7 92668321 92668607 + 1.58711810488664 NA intron (NM_029078, intron 1 of 15) intron (NM_029078, intron 1 of 15) 1448 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-53 chr3 89285354 89285590 + 1.58711810488664 NA Intergenic Intergenic -4521 NM_001162425 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-76 chr8 70211999 70212202 + 1.58711810488664 NA intron (NM_001007570, intron 1 of 7) CpG 181 NM_001007570 73095 Mm.185413 NM_001007570 ENSMUSG00000002346 Slc25a42 2900084M01Rik solute carrier family 25, member 42 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-4 chr1 153201533 153201746 + 1.58711810488664 NA Intergenic Intergenic -15192 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-28 chr3 65635392 65635614 + 1.58711810488664 NA Intergenic Intergenic -23785 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-63 chr5 88564595 88564820 + 1.58711810488664 NA promoter-TSS (NM_001289775) promoter-TSS (NM_001289775) -333 NM_001289774 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-61 chr4 155852205 155852440 + 1.58711810488664 NA intron (NM_001356381, intron 1 of 15) intron (NM_001356381, intron 1 of 15) 4920 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-6 chr1 133744609 133744934 + 1.58711810488664 NA intron (NM_213616, intron 1 of 19) intron (NM_213616, intron 1 of 19) 8976 NM_001167949 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-29 chr3 137296901 137297100 + 1.58711810488664 NA Intergenic Intergenic -44078 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-6 chr7 122020651 122020878 + 1.58711810488664 NA intron (NM_028758, intron 1 of 16) CpG 434 NM_028758 74105 Mm.29619 NM_028758 ENSMUSG00000030872 Gga2 1200007E24Rik|mKIAA1080 golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664 chr11 97428729 97428949 + 1.58711810488664 NA Intergenic Intergenic -21321 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-20 chr11 88169637 88169974 + 1.58711810488664 NA 5' UTR (NM_198013, exon 2 of 11) 5' UTR (NM_198013, exon 2 of 11) 240 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-21 chr18 39800521 39800762 + 1.58711810488664 NA Intergenic Intergenic 27144 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-24 chr13 32369144 32369401 + 1.58711810488664 NA Intergenic Intergenic -30728 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-31 chr5 140083212 140083419 + 1.58711810488664 NA intron (NR_152617, intron 15 of 16) intron (NR_152617, intron 15 of 16) 91603 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-59 chr4 114410193 114410401 + 1.58711810488664 NA intron (NM_001085549, intron 2 of 6) intron (NM_001085549, intron 2 of 6) 3573 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664 chr1 82291829 82292050 + 1.58711810488664 NA promoter-TSS (NM_010570) promoter-TSS (NM_010570) -500 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-37 chr16 32668038 32668319 + 1.58711810488664 NA promoter-TSS (NR_033493) promoter-TSS (NR_033493) 19 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-16 chr14 61353974 61354310 + 1.58711810488664 NA intron (NM_026598, intron 1 of 3) intron (NM_026598, intron 1 of 3) 6303 NM_026598 68177 Mm.22758 NM_026598 ENSMUSG00000021928 Ebpl 5730442K12Rik|EBRP emopamil binding protein-like protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-54 chr3 121599433 121599646 + 1.58711810488664 NA Intergenic Intergenic 43946 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-77 chr8 79498402 79498608 + 1.58711810488664 NA Intergenic Intergenic -99037 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-34 chr7 66592082 66592385 + 1.58711810488664 NA Intergenic Intergenic 97328 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-70 chr7 5019117 5019516 + 1.58711810488664 NA TTS (NM_025324) TTS (NM_025324) -1060 NM_001290426 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-2 chr1 77471631 77471841 + 1.58711810488664 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 25032 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-36 chr16 30956044 30956268 + 1.58711810488664 NA 3' UTR (NM_198626, exon 4 of 4) 3' UTR (NM_198626, exon 4 of 4) 125276 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-66 chr5 138255289 138255495 + 1.58711810488664 NA promoter-TSS (NM_001081108) promoter-TSS (NM_001081108) -90 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-47 chr2 25223194 25223420 + 1.58711810488664 NA exon (NM_146116, exon 4 of 4) exon (NM_146116, exon 4 of 4) 1395 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-57 chr4 48226379 48226589 + 1.58711810488664 NA intron (NM_001355184, intron 3 of 10) intron (NM_001355184, intron 3 of 10) -13269 NR_035484 100316708 NR_035484 ENSMUSG00000087844 Mir1958 mmu-mir-1958 microRNA 1958 ncRNA unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-30 chr4 132398497 132398726 + 1.58711810488664 NA intron (NM_001161797, intron 2 of 12) (TG)n|Simple_repeat|Simple_repeat 23835 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-7 chr1 167243415 167243831 + 1.58711810488664 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 41504 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-18 chr11 56375174 56375375 + 1.58711810488664 NA Intergenic Intergenic -334287 NM_153079 216749 Mm.213205 NM_153079 ENSMUSG00000037393 Nmur2 Nmu2r neuromedin U receptor 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-80 chr8 124688300 124688507 + 1.58711810488664 NA intron (NM_001357357, intron 8 of 19) intron (NM_001357357, intron 8 of 19) -25034 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-14 chr10 88379442 88379696 + 1.58711810488664 NA intron (NM_001004164, intron 1 of 20) CpG 157 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-2 chr2 11706028 11706427 + 1.58711810488664 NA intron (NM_001271499, intron 1 of 6) intron (NM_001271499, intron 1 of 6) 515 NM_001271500 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-78 chr8 90812502 90812781 + 1.58711810488664 NA Intergenic Intergenic -16194 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-2 chr1 89110681 89110940 + 1.58711810488664 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 40395 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-15 chr14 45528243 45528505 + 1.58711810488664 NA intron (NM_146054, intron 2 of 14) intron (NM_146054, intron 2 of 14) 1691 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-18 chr17 3314256 3314564 + 1.58711810488664 NA Intergenic CpG -12163 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-34 chr15 76458905 76459163 + 1.58711810488664 NA intron (NM_198885, intron 1 of 1) intron (NM_198885, intron 1 of 1) 1596 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-19 chr11 74569211 74569406 + 1.58711810488664 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 20850 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-56 chr3 144693596 144693788 + 1.58711810488664 NA intron (NM_001282037, intron 9 of 10) intron (NM_001282037, intron 9 of 10) 26643 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-10 chr10 12825879 12826166 + 1.58711810488664 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 35713 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-22 chr18 60502685 60502978 + 1.58711810488664 NA promoter-TSS (NM_134133) promoter-TSS (NM_134133) -848 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-58 chr4 106320395 106320622 + 1.58711810488664 NA intron (NM_183225, intron 1 of 67) intron (NM_183225, intron 1 of 67) 4295 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-29 chr14 27809038 27809284 + 1.58711810488664 NA intron (NM_001347497, intron 4 of 19) intron (NM_001347497, intron 4 of 19) 186754 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-38 chr9 120830167 120830442 + 1.58711810488664 NA Intergenic Intergenic 84946 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-12 chr10 80284982 80285230 + 1.58711810488664 NA intron (NM_133188, intron 10 of 11) intron (NM_133188, intron 10 of 11) 6942 NR_105876 102466207 NR_105876 ENSMUSG00000098672 Mir6911 Gm27822|mmu-mir-6911 microRNA 6911 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-79 chr8 121954632 121954883 + 1.58711810488664 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 4265 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-15 chr11 12395638 12395977 + 1.58711810488664 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 16333 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-35 chr15 79361905 79362174 + 1.58711810488664 NA 3' UTR (NM_001253817, exon 9 of 9) 3' UTR (NM_001253817, exon 9 of 9) 13261 NR_035464 100316695 NR_035464 ENSMUSG00000088901 Mir1943 mir-1943|mmu-mir-1943 microRNA 1943 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-84 chr9 96779481 96779828 + 1.58711810488664 NA Intergenic Intergenic 14092 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-10 chr12 10327449 10327711 + 1.58711810488664 NA Intergenic Intergenic -42391 NM_027588 70881 Mm.272843 NM_027588 ENSMUSG00000020622 Nt5c1b 4921514H13Rik|AIRP|CN-IB|cN1B 5'-nucleotidase, cytosolic IB protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-69 chr6 99442375 99442608 + 1.58711810488664 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -7146 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-5 chr1 191277580 191277812 + 1.58711810488664 NA Intergenic Intergenic 40422 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-4 chr1 89109331 89109593 + 1.58711810488664 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 39047 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-6 chr11 6037209 6037583 + 1.58711810488664 NA intron (NM_001174054, intron 1 of 20) intron (NM_001174054, intron 1 of 20) 28352 NM_001174054 12323 Mm.439733 NM_007595 ENSMUSG00000057897 Camk2b CaMKII calcium/calmodulin-dependent protein kinase II, beta protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664 chr1 75236093 75236304 + 1.58711810488664 NA promoter-TSS (NM_001159885) promoter-TSS (NM_001159885) -225 NM_001159884 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-40 chr16 58701673 58701874 + 1.58711810488664 NA Intergenic Intergenic 16951 NM_001162955 71223 Mm.359970 NM_001162955 ENSMUSG00000047293 Gpr15 4933439K08Rik G protein-coupled receptor 15 protein-coding common_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664 chr17 62675509 62675804 + 1.58711810488664 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 205661 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-7 chr8 128163419 128163691 + 1.58711810488664 NA Intergenic Intergenic 114670 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-23 chr18 84155370 84155642 + 1.58711810488664 NA Intergenic Intergenic 67348 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-33 chr15 66796540 66796756 + 1.58711810488664 NA intron (NM_001029841, intron 2 of 7) intron (NM_001029841, intron 2 of 7) 35181 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-50 chr2 167851626 167851848 + 1.58711810488664 NA Intergenic Intergenic -80590 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-9 chr11 104289150 104289402 + 1.58711810488664 NA intron (NM_001038609, intron 3 of 11) intron (NM_001038609, intron 3 of 11) 57840 NM_001285454 17762 Mm.1287 NM_010838 ENSMUSG00000018411 Mapt AI413597|AW045860|Mtapt|Tau microtubule-associated protein tau protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-16 chr11 45853225 45853448 + 1.58711810488664 NA intron (NM_001045520, intron 1 of 11) intron (NM_001045520, intron 1 of 11) 1372 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-83 chr9 94409361 94409705 + 1.58711810488664 NA Intergenic Intergenic 128548 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-4 chr4 99493439 99493713 + 1.58711810488664 NA Intergenic Intergenic -162723 NM_010425 15221 Mm.4758 NM_010425 ENSMUSG00000067261 Foxd3 CWH3|Genesis|Hfh2 forkhead box D3 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-11 chr10 43581836 43582276 + 1.58711810488664 NA intron (NM_009846, intron 1 of 1) intron (NM_009846, intron 1 of 1) 2887 NM_009846 12484 Mm.29742 NM_009846 ENSMUSG00000047139 Cd24a Cd24|HSA|Ly-52|nectadrin CD24a antigen protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-32 chr15 41603120 41603388 + 1.58711810488664 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 154151 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-49 chr2 118408052 118408330 + 1.58711810488664 NA intron (NM_013719, intron 3 of 38) intron (NM_013719, intron 3 of 38) 19079 NM_001177806 27103 Mm.217616 NM_013719 ENSMUSG00000005102 Eif2ak4 2610011M03|GCN2|MGCN2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-26 chr2 25371918 25372132 + 1.58711810488664 NA promoter-TSS (NM_001290407) promoter-TSS (NM_001290407) -10 NM_001290407 72080 Mm.250293 NM_001081085 ENSMUSG00000026955 Sapcd2 2010317E24Rik|6030458L21Rik|AL033337|ang suppressor APC domain containing 2 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-17 chr14 76773567 76773873 + 1.58711810488664 NA Intergenic Intergenic 13589 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-25 chr13 34333489 34333792 + 1.58711810488664 NA intron (NM_001033167, intron 1 of 10) intron (NM_001033167, intron 1 of 10) 11542 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-46 chr19 47328252 47328509 + 1.58711810488664 NA intron (NM_008018, intron 6 of 14) intron (NM_008018, intron 6 of 14) -54791 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-60 chr4 139386903 139387110 + 1.58711810488664 NA intron (NM_001160319, intron 1 of 105) intron (NM_001160319, intron 1 of 105) 6347 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-27 chr13 108235249 108235476 + 1.58711810488664 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 20958 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-5 chr1 89779952 89780219 + 1.58711810488664 NA intron (NM_178119, intron 12 of 17) intron (NM_178119, intron 12 of 17) -96193 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-19 chr17 45584368 45584602 + 1.58711810488664 NA TTS (NM_001199116) TTS (NM_001199116) 7908 NM_022880 63959 Mm.29744 NM_022880 ENSMUSG00000023942 Slc29a1 1200014D21Rik|AA407560|ENT1 solute carrier family 29 (nucleoside transporters), member 1 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-12 chr12 35565310 35565588 + 1.58711810488664 NA Intergenic Intergenic -30460 NM_001314027 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-24 chr19 28237870 28238178 + 1.58711810488664 NA Intergenic Intergenic -226858 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-8 chr11 101806260 101806637 + 1.58711810488664 NA Intergenic B2_Mm2|SINE|B2 -21138 NM_001316365 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-3 chr1 135714649 135714981 + 1.58711810488664 NA Intergenic MLT1A|LTR|ERVL-MaLR -5248 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-26 chr13 104450704 104450984 + 1.58711810488664 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 163009 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-82 chr9 62371958 62372184 + 1.58711810488664 NA exon (NM_009672, exon 3 of 7) exon (NM_009672, exon 3 of 7) 30728 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-41 chr16 93910759 93911130 + 1.58711810488664 NA Intergenic Intergenic 18623 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-64 chr5 117977038 117977239 + 1.58711810488664 NA intron (NM_001346588, intron 1 of 11) CpG 368 NM_001346588 231670 Mm.21912 NM_145564 ENSMUSG00000032898 Fbxo21 2810425J22Rik|AU016673 F-box protein 21 protein-coding unique_peak2_6_13_-1.26154586911919_3.17658198749801_1.58711810488664-27 chr2 84670277 84670574 + 1.58711810488664 NA TTS (NM_025868) TTS (NM_025868) 283 NM_001033166 72657 Mm.259293 NM_001033166 ENSMUSG00000076437 Selenoh 2700094K13Rik|Selh selenoprotein H protein-coding common_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-3 chr3 27664798 27665015 + 1.58711810488664 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 45546 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-31 chr14 99100065 99100259 + 1.58711810488664 NA promoter-TSS (NM_028315) promoter-TSS (NM_028315) -392 NR_153390 72662 Mm.163339 NM_028315 ENSMUSG00000033166 Dis3 2810028N01Rik DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease protein-coding unique_peak1_15_6_0.922685122160192_3.2686974831377_1.58711810488664-71 chr7 49702014 49702358 + 1.58711810488664 NA Intergenic RSINE1|SINE|B4 -56920 NM_001146053 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-5 chr19 28282777 28283127 + 1.58667673738995 NA intron (NM_175459, intron 9 of 10) intron (NM_175459, intron 9 of 10) -271786 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995-2 chr15 6259831 6260136 + 1.58667673738995 NA Intergenic Intergenic -39806 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-8 chr8 120227652 120228008 + 1.58667673738995 NA intron (NR_110496, intron 1 of 2) intron (NR_110496, intron 1 of 2) 400 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995 chr11 119976180 119976517 + 1.58667673738995 NA intron (NM_001037754, intron 3 of 13) intron (NM_001037754, intron 3 of 13) 33256 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-6 chr4 117681765 117682190 + 1.58667673738995 NA 5' UTR (NM_023178, exon 2 of 11) 5' UTR (NM_023178, exon 2 of 11) 248 NM_023178 66233 Mm.29142 NM_023178 ENSMUSG00000009640 Dmap1 1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425 DNA methyltransferase 1-associated protein 1 protein-coding common_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995 chr10 53379220 53379610 + 1.58667673738995 NA intron (NM_001204983, intron 1 of 12) CpG 436 NM_001204983 100038725 Mm.441403 NM_001204983 ENSMUSG00000038594 Cep85l Gm9766 centrosomal protein 85-like protein-coding unique_peak2_13_27_-1.26860084869243_4.17305449771139_1.58667673738995-4 chr2 72882003 72882335 + 1.58667673738995 NA Intergenic Intergenic -68452 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA common_peak2_32_12_1.06662626625667_4.23375285126943_1.58667673738995-2 chr6 43256517 43256804 + 1.58667673738995 NA Intergenic Intergenic -8984 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak2_32_12_1.06662626625667_4.23375285126943_1.58667673738995 chr2 21234188 21234548 + 1.58667673738995 NA Intergenic Intergenic 28644 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak2_13_27_-1.26860084869243_4.17305449771139_1.58667673738995 chr7 90343063 90343369 + 1.58667673738995 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 40861 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-7 chr5 92851368 92851846 + 1.58667673738995 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 42225 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995-3 chr8 94711156 94711373 + 1.58667673738995 NA Intergenic Intergenic -15022 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding unique_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995-3 chr17 26619685 26620011 + 1.58667673738995 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) -56548 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995-2 chr12 8661421 8661706 + 1.58667673738995 NA Intergenic Intergenic -12571 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995 chr1 54798534 54799352 + 1.58667673738995 NA intron (NM_001081433, intron 2 of 27) intron (NM_001081433, intron 2 of 27) 127444 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-9 chr9 44485881 44486294 + 1.58667673738995 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) 3262 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_14_27_-1.16976739728523_4.22247122341499_1.58667673738995 chr11 99077291 99077514 + 1.58667673738995 NA intron (NM_172564, intron 4 of 12) intron (NM_172564, intron 4 of 12) 11904 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-2 chr10 45066430 45066943 + 1.58667673738995 NA promoter-TSS (NM_011156) promoter-TSS (NM_011156) -528 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding unique_peak2_13_27_-1.26860084869243_4.17305449771139_1.58667673738995-2 chr18 61109177 61109571 + 1.58667673738995 NA intron (NM_001037859, intron 2 of 21) intron (NM_001037859, intron 2 of 21) 3802 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-3 chr11 51063668 51064053 + 1.58667673738995 NA intron (NM_009329, intron 4 of 4) intron (NM_009329, intron 4 of 4) 4603 NM_001347495 21408 Mm.4792 NM_009329 ENSMUSG00000020364 Zfp354a AW488485|Tcf17|Znf354a|kid1 zinc finger protein 354A protein-coding unique_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-4 chr17 47629240 47629483 + 1.58667673738995 NA Intergenic CpG -1329 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding unique_peak2_13_27_-1.26860084869243_4.17305449771139_1.58667673738995 chr13 63643003 63643452 + 1.58667673738995 NA Intergenic Intergenic -69767 NM_001328514 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995-4 chr8 125920592 125920976 + 1.58667673738995 NA intron (NM_145608, intron 1 of 9) intron (NM_145608, intron 1 of 9) 10334 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding unique_peak2_13_27_-1.26860084869243_4.17305449771139_1.58667673738995-3 chr19 40477205 40477447 + 1.58667673738995 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -25928 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995-4 chr2 157134463 157134863 + 1.58667673738995 NA intron (NM_001139520, intron 1 of 16) intron (NM_001139520, intron 1 of 16) 559 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding unique_peak2_14_27_-1.16976739728523_4.22247122341499_1.58667673738995 chr1 82599452 82599723 + 1.58667673738995 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 12666 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak1_32_12_1.06662626625667_4.23375285126943_1.58667673738995-2 chr2 58546802 58547090 + 1.58667673738995 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 14464 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak1_133_76_0.507711497372243_6.52064228938102_1.58613072781108 chr4 152411361 152412850 + 1.58613072781108 NA intron (NM_010598, intron 4 of 15) intron (NM_010598, intron 4 of 15) 36750 NM_001252655 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_132_76_0.496980983851132_6.51527703262047_1.58613072781108 chr1 5018201 5020103 + 1.58613072781108 NA promoter-TSS (NM_001290372) promoter-TSS (NM_001290372) 387 NM_021374 58175 Mm.103771 NM_021374 ENSMUSG00000002459 Rgs20 2900073E09Rik|Rgsz1 regulator of G-protein signaling 20 protein-coding common_peak2_92_109_-0.530074571744423_6.51632242765245_1.58613072781106 chr10 37136008 37137487 + 1.58613072781106 NA exon (NM_008538, exon 2 of 2) exon (NM_008538, exon 2 of 2) 2179 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak2_229_237_-0.3464175219043_7.72160900235579_1.5843633885935 chr10 111515123 111518192 + 1.5843633885935 NA Intergenic Intergenic 10371 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak2_119_135_-0.471040255197698_6.85194271365149_1.58230355099959 chr11 69757873 69759865 + 1.58230355099959 NA promoter-TSS (NM_001291068) promoter-TSS (NM_001291068) -236 NM_001291068 20020 Mm.16533 NM_009089 ENSMUSG00000005198 Polr2a 220kDa|Rpb1|Rpo2-1 polymerase (RNA) II (DNA directed) polypeptide A protein-coding common_peak1_165_98_0.451912021238065_6.85531263069864_1.58230355099959 chrX 96096225 96097803 + 1.58230355099959 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 969 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_164_98_0.443256303925541_6.85098477204238_1.58230355099959 chr1 135146099 135147629 + 1.58230355099959 NA promoter-TSS (NM_026823) promoter-TSS (NM_026823) 30 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding common_peak2_49_66_-0.703790328305463_5.71419402630504_1.58121319066504 chr14 16242905 16243972 + 1.58121319066504 NA promoter-TSS (NM_001359883) promoter-TSS (NM_001359883) -107 NM_001359883 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak1_80_41_0.661065030348853_5.72284993795319_1.58121319066504-2 chr8 124330579 124331365 + 1.58121319066504 NA intron (NM_139272, intron 8 of 15) intron (NM_139272, intron 8 of 15) 99578 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_80_41_0.661065030348853_5.72284993795319_1.58121319066504 chr8 120487297 120488246 + 1.58121319066504 NA Intergenic CpG -1095 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_64_81_-0.619411910982336_6.04784604912692_1.58091405176572 chr4 62501890 62502603 + 1.58091405176572 NA promoter-TSS (NM_024257) promoter-TSS (NM_024257) -46 NM_024257 72748 Mm.41506 NM_024257 ENSMUSG00000038422 Hdhd3 2810435D12Rik haloacid dehalogenase-like hydrolase domain containing 3 protein-coding common_peak1_98_53_0.5859591048885_6.04786705460772_1.58091405176572 chr5 91615996 91617307 + 1.58091405176572 NA intron (NM_145562, intron 3 of 3) intron (NM_145562, intron 3 of 3) 98951 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_248_157_0.358323495368025_7.48294249586112_1.58086928310576 chr7 59228014 59230142 + 1.58086928310576 NA 5' UTR (NM_173010, exon 1 of 9) 5' UTR (NM_173010, exon 1 of 9) 328 NM_173010 22215 Mm.9002 NM_011668 ENSMUSG00000025326 Ube3a 4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a ubiquitin protein ligase E3A protein-coding common_peak1_670_465_0.217995323881372_8.97318380659497_1.58079517943386 chr19 42015236 42019410 + 1.58079517943386 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -18715 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding common_peak1_173_104_0.434448126365355_6.9314695808488_1.58078477103936 chr12 35283049 35285631 + 1.58078477103936 NA Intergenic Intergenic -89443 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak2_22_37_-0.998019232074086_4.74891789740654_1.57996244908225-2 chr17 43407882 43408617 + 1.57996244908225 NA intron (NM_001357332, intron 2 of 20) intron (NM_001357332, intron 2 of 20) 18783 NM_001081178 224792 Mm.23478 NM_001081178 ENSMUSG00000056492 Adgrf5 8430401C09Rik|9330185D23|AI528491|Gpr116|mKIAA0758 adhesion G protein-coupled receptor F5 protein-coding common_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225-4 chr8 92852028 92852661 + 1.57996244908225 NA intron (NM_008610, intron 12 of 12) intron (NM_008610, intron 12 of 12) -2989 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak2_22_37_-0.998019232074086_4.74891789740654_1.57996244908225 chr11 94601575 94602295 + 1.57996244908225 NA promoter-TSS (NM_153807) promoter-TSS (NM_153807) -149 NM_153807 264895 Mm.386885 NM_153807 ENSMUSG00000076435 Acsf2 - acyl-CoA synthetase family member 2 protein-coding unique_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225 chr16 45077850 45078397 + 1.57996244908225 NA Intergenic Intergenic -15888 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225-2 chr2 118179704 118180174 + 1.57996244908225 NA Intergenic Intergenic 68063 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak2_22_37_-0.998019232074086_4.74891789740654_1.57996244908225 chr11 31224343 31225291 + 1.57996244908225 NA Intergenic MTB_Mm|LTR|ERVL-MaLR 145244 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225-3 chr6 72188902 72189738 + 1.57996244908225 NA Intergenic CpG 46257 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding common_peak2_22_37_-0.998019232074086_4.74891789740654_1.57996244908225-2 chr4 58185114 58185644 + 1.57996244908225 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 21217 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225 chr1 191397832 191398196 + 1.57996244908225 NA promoter-TSS (NM_144880) promoter-TSS (NM_144880) -973 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225-3 chr3 107279094 107279612 + 1.57996244908225 NA intron (NM_026774, intron 1 of 3) CpG 495 NM_026774 68576 Mm.290035 NM_026774 ENSMUSG00000087260 Lamtor5 1110003H18Rik|Hbxip|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding unique_peak1_44_19_0.889440052539221_4.76664812115697_1.57996244908225-2 chr17 8800830 8801382 + 1.57996244908225 NA promoter-TSS (NM_011866) promoter-TSS (NM_011866) -639 NM_011866 23984 Mm.87161 NM_011866 ENSMUSG00000023868 Pde10a - phosphodiesterase 10A protein-coding unique_peak2_22_37_-0.998019232074086_4.74891789740654_1.57996244908225-3 chr7 89624189 89624910 + 1.57996244908225 NA Intergenic Intergenic -8269 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_303_196_0.325946696369038_7.7850251676409_1.57880479899463 chr19 10099433 10101748 + 1.57880479899463 NA intron (NM_019699, intron 1 of 11) intron (NM_019699, intron 1 of 11) 913 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_75_92_-0.577050336136129_6.25063364303997_1.57822318378458 chr6 133105274 133105649 + 1.57822318378458 NA exon (NM_001163445, exon 1 of 1) exon (NM_001163445, exon 1 of 1) 222 NR_073368 381820 Mm.291762 NM_001163445 ENSMUSG00000072704 Smim10l1 2700089E24Rik|AI662692 small integral membrane protein 10 like 1 protein-coding common_peak2_75_92_-0.577050336136129_6.25063364303997_1.57822318378458 chr17 72969060 72970589 + 1.57822318378458 NA Intergenic B2_Mm2|SINE|B2 51519 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_111_62_0.540309211145519_6.24743452907268_1.57822318378457 chr1 55087012 55087792 + 1.57822318378457 NA promoter-TSS (NM_008303) promoter-TSS (NM_008303) 530 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak2_112_62_0.553042778160335_6.25380131258008_1.57822318378457 chr14 45529396 45530701 + 1.57822318378457 NA promoter-TSS (NM_001360525) promoter-TSS (NM_001360525) 17 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_111_62_0.540309211145519_6.24743452907268_1.57822318378457-2 chr2 25254866 25255942 + 1.57822318378457 NA promoter-TSS (NM_001252541) promoter-TSS (NM_001252541) 10 NM_001252541 78797 Mm.40020 NM_178239 ENSMUSG00000006471 Ndor1 4930447P04Rik|NR1|Ndor|Tg(UBC-cre/ERT2)1Ejb|Ubc-cre NADPH dependent diflavin oxidoreductase 1 protein-coding common_peak2_111_62_0.540309211145519_6.24743452907268_1.57822318378457 chr2 151906150 151907156 + 1.57822318378457 NA Intergenic MLT1K|LTR|ERVL-MaLR -4554 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_111_62_0.540309211145519_6.24743452907268_1.57822318378457-4 chr7 28952863 28954251 + 1.57822318378457 NA intron (NM_021895, intron 1 of 20) ID_B1|SINE|B4 8775 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_111_62_0.540309211145519_6.24743452907268_1.57822318378457-3 chr6 147199010 147200016 + 1.57822318378457 NA intron (NR_033640, intron 2 of 2) intron (NR_033640, intron 2 of 2) 19272 NR_033640 100039641 Mm.170402 NR_033640 ENSMUSG00000085600 E330012B07Rik Gm15768 RIKEN cDNA E330012B07 gene ncRNA common_peak2_59_76_-0.643308975069016_5.94513205316039_1.57746876239185 chr1 135429661 135430940 + 1.57746876239185 NA exon (NM_153774, exon 1 of 24) exon (NM_153774, exon 1 of 24) 191 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding common_peak1_92_49_0.607428952005512_5.94757066577748_1.57746876239184 chr1 162242596 162243328 + 1.57746876239184 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 19594 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA common_peak2_54_71_-0.671092700091373_5.83437865139663_1.57728862130808 chr5 65763047 65763763 + 1.57728862130808 NA promoter-TSS (NM_001024917) promoter-TSS (NM_001024917) -116 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding common_peak2_54_71_-0.671092700091373_5.83437865139663_1.57728862130808-2 chr5 104379808 104380741 + 1.57728862130808 NA Intergenic Intergenic -54837 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_86_45_0.632186667547708_5.83965528983087_1.57728862130806 chr19 43878812 43879738 + 1.57728862130806 NA intron (NM_028029, intron 4 of 15) intron (NM_028029, intron 4 of 15) 493 NM_001306088 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak1_200_123_0.401137329907724_7.15476497534074_1.57725417543915 chr15 5116667 5117935 + 1.57725417543915 NA exon (NM_026069, exon 2 of 4) exon (NM_026069, exon 2 of 4) 688 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding common_peak2_68_34_0.694405887078743_5.47648596048434_1.57714285263546 chr7 142060247 142060931 + 1.57714285263546 NA 5' UTR (NM_001347560, exon 1 of 5) 5' UTR (NM_001347560, exon 1 of 5) 264 NM_001347560 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding unique_peak1_69_34_0.715017996027592_5.48679201495876_1.57714285263546 chr8 60634154 60634897 + 1.57714285263546 NA intron (NM_001293769, intron 1 of 1) intron (NM_001293769, intron 1 of 1) 1700 NM_001293769 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_69_34_0.715017996027592_5.48679201495876_1.57714285263546-2 chr5 5688543 5689241 + 1.57714285263546 NA intron (NM_028734, intron 1 of 5) MER5B|DNA|hAT-Charlie 5197 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_68_34_0.694405887078743_5.47648596048434_1.57714285263546-4 chr2 102805118 102806158 + 1.57714285263546 NA Intergenic Intergenic -58878 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak1_69_34_0.715017996027592_5.48679201495876_1.57714285263546 chr17 74338839 74339671 + 1.57714285263546 NA exon (NM_001162870, exon 1 of 17) exon (NM_001162870, exon 1 of 17) 268 NM_016962 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding common_peak1_68_34_0.694405887078743_5.47648596048434_1.57714285263546-2 chr18 65737427 65738347 + 1.57714285263546 NA exon (NM_177028, exon 9 of 15) exon (NM_177028, exon 9 of 15) 39619 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak2_69_34_0.715017996027592_5.48679201495876_1.57714285263546-2 chr14 105258825 105259320 + 1.57714285263546 NA intron (NM_029561, intron 1 of 7) CpG 399 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak1_68_34_0.694405887078743_5.47648596048434_1.57714285263546 chr10 56228069 56228954 + 1.57714285263546 NA exon (NM_001033385, exon 1 of 33) exon (NM_001033385, exon 1 of 33) 178 NM_001033385 544696 Mm.411188 NM_001033385 ENSMUSG00000038122 Tbc1d32 Bromi|C6orf170|D630037F22Rik|b2b2284Clo TBC1 domain family, member 32 protein-coding common_peak1_68_34_0.694405887078743_5.47648596048434_1.57714285263546-3 chr19 42052518 42053481 + 1.57714285263546 NA exon (NM_025752, exon 1 of 1) exon (NM_025752, exon 1 of 1) 771 NM_025752 66765 Mm.440412 NM_025752 ENSMUSG00000090369 4933411K16Rik - RIKEN cDNA 4933411K16 gene protein-coding common_peak2_69_34_0.715017996027592_5.48679201495876_1.57714285263546 chr14 70332862 70333652 + 1.57714285263546 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 15176 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_40_57_-0.77996644795389_5.46799777115063_1.57714285263545 chr2 31950330 31951274 + 1.57714285263545 NA intron (NM_145144, intron 2 of 5) intron (NM_145144, intron 2 of 5) 499 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding common_peak2_40_57_-0.77996644795389_5.46799777115063_1.57714285263545-2 chr4 127348858 127349660 + 1.57714285263545 NA Intergenic Intergenic 4822 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak1_202_212_-0.365192528847686_7.552113355802_1.57670264559073 chr5 140418451 140420048 + 1.57670264559073 NA promoter-TSS (NM_133916) promoter-TSS (NM_133916) -56 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak1_157_93_0.455923835024395_6.78255076918984_1.57431554914519 chr4 83314712 83316838 + 1.57431554914519 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 8414 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_192_117_0.41450932110835_7.08989770991602_1.57358584735914 chr6 17478107 17480361 + 1.57358584735914 NA intron (NM_008591, intron 1 of 21) PB1D10|SINE|Alu 15277 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_119_67_0.528959744802302_6.35194271365149_1.57329568374624 chr12 33957874 33959367 + 1.57329568374624 NA 3' UTR (NM_011658, exon 1 of 2) 3' UTR (NM_011658, exon 1 of 2) 949 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding common_peak1_81_98_-0.558397052479171_6.35015809384002_1.57329568374622 chr8 36728499 36729804 + 1.57329568374622 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 3903 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_93_110_-0.527809542621296_6.53051109503946_1.572239968189 chr2 5950313 5951941 + 1.572239968189 NA promoter-TSS (NM_001081132) promoter-TSS (NM_001081132) -342 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak1_120_136_-0.469721321984202_6.86317142196843_1.57130714634861 chr19 46056589 46057434 + 1.57130714634861 NA intron (NM_001346801, intron 1 of 13) CpG 472 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding common_peak1_120_136_-0.469721321984202_6.86317142196843_1.57130714634861-2 chr8 72146903 72148490 + 1.57130714634861 NA intron (NM_001001491, intron 7 of 7) PB1D10|SINE|Alu 12404 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_230_144_0.374705984810465_7.36726208242017_1.57101928965355 chr9 61372487 61374977 + 1.57101928965355 NA intron (NM_001083928, intron 1 of 19) CpG 1366 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_175_188_-0.3971769807705_7.36365393383582_1.5710192896535 chr17 34030884 34033072 + 1.5710192896535 NA promoter-TSS (NM_001205216) promoter-TSS (NM_001205216) 166 NM_001205214 20182 Mm.1243 NM_011306 ENSMUSG00000039656 Rxrb AL023085|H-2RIIBP|Nr2b2|RCoR-1|Rub retinoid X receptor beta protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-36 chr8 36665761 36666074 + 1.57096726280955 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -51974 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-2 chr10 81070480 81070687 + 1.57096726280955 NA intron (NM_022653, intron 1 of 12) intron (NM_022653, intron 1 of 12) 500 NM_022653 50492 Mm.26995 NM_022653 ENSMUSG00000004929 Thop1 AI131655|AI327041|EP24.15 thimet oligopeptidase 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-57 chr6 17072160 17072391 + 1.57096726280955 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 7126 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-55 chr5 35719034 35719226 + 1.57096726280955 NA intron (NM_001359895, intron 3 of 17) intron (NM_001359895, intron 3 of 17) 10146 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-5 chr10 69954594 69954876 + 1.57096726280955 NA intron (NM_170729, intron 25 of 40) intron (NM_170729, intron 25 of 40) 29203 NM_009670 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-20 chr2 9148335 9148560 + 1.57096726280955 NA Intergenic Intergenic -41068 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-15 chr11 117932046 117932299 + 1.57096726280955 NA Intergenic L2a|LINE|L2 37194 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-11 chr3 93002812 93003019 + 1.57096726280955 NA Intergenic Intergenic 10689 NM_001018079 69520 Mm.439968 NM_001018079 ENSMUSG00000068885 Lce3f 2310002A05Rik late cornified envelope 3F protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-37 chr18 73979816 73980031 + 1.57096726280955 NA intron (NM_172632, intron 1 of 5) intron (NM_172632, intron 1 of 5) -37984 NR_045390 77855 Mm.410760 NR_045390 ENSMUSG00000090263 D730045A05Rik - RIKEN cDNA D730045A05 gene ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-29 chr5 118758599 118758857 + 1.57096726280955 NA intron (NM_001347445, intron 28 of 30) intron (NM_001347445, intron 28 of 30) -193611 NR_040694 74627 Mm.410828 NR_040694 ENSMUSG00000107144 4930413E15Rik - RIKEN cDNA 4930413E15 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-48 chr3 79161726 79161986 + 1.57096726280955 NA Intergenic Intergenic -15981 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-2 chr1 43714631 43714848 + 1.57096726280955 NA Intergenic Intergenic -15863 NM_024283 78896 Mm.50109 NM_024283 ENSMUSG00000026051 1500015O10Rik Ecrg4 RIKEN cDNA 1500015O10 gene protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-63 chr8 30128145 30128384 + 1.57096726280955 NA Intergenic Intergenic -440131 NR_045856 71314 Mm.158666 NR_045856 ENSMUSG00000097044 4933433F19Rik - RIKEN cDNA 4933433F19 gene ncRNA unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-12 chr4 43970463 43970670 + 1.57096726280955 NA exon (NM_027450, exon 4 of 5) exon (NM_027450, exon 4 of 5) 12864 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-60 chr7 4924742 4924951 + 1.57096726280955 NA promoter-TSS (NM_173008) promoter-TSS (NM_173008) -998 NM_173008 269855 Mm.44190 NM_173008 ENSMUSG00000035279 Ssc5d A430110N23Rik|S5D-SRCRB scavenger receptor cysteine rich family, 5 domains protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-40 chr19 57207531 57207815 + 1.57096726280955 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) 8359 NM_001290813 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-15 chr5 105698196 105698595 + 1.57096726280955 NA Intergenic ID_B1|SINE|B4 -1574 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-24 chr13 64370602 64370805 + 1.57096726280955 NA promoter-TSS (NM_009984) promoter-TSS (NM_009984) -183 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-49 chr3 107685997 107686274 + 1.57096726280955 NA intron (NM_145542, intron 1 of 16) intron (NM_145542, intron 1 of 16) 9921 NM_001357113 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-18 chr7 111996429 111996635 + 1.57096726280955 NA Intergenic Intergenic -26974 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-5 chr1 171250548 171250787 + 1.57096726280955 NA 5' UTR (NM_172845, exon 1 of 9) 5' UTR (NM_172845, exon 1 of 9) 538 NM_172845 240913 Mm.491147 NM_172845 ENSMUSG00000006403 Adamts4 ADAM-TS4|ADAMTS-2|ADMP-1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-70 chr9 47249495 47249751 + 1.57096726280955 NA Intergenic Intergenic 250882 NM_001243258 215467 Mm.246572 NM_001243258 ENSMUSG00000094893 Gm4791 D930036J05 predicted gene 4791 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-72 chr9 54585943 54586199 + 1.57096726280955 NA promoter-TSS (NM_029573) promoter-TSS (NM_029573) -440 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-21 chr13 59935974 59936187 + 1.57096726280955 NA Intergenic MIR3|SINE|MIR -93631 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-5 chr13 80891516 80891730 + 1.57096726280955 NA non-coding (NR_153410, exon 7 of 8) non-coding (NR_153410, exon 7 of 8) 5528 NR_153411 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-6 chr10 84301695 84301895 + 1.57096726280955 NA Intergenic Intergenic 138676 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-27 chr5 33722506 33722724 + 1.57096726280955 NA intron (NM_001359036, intron 2 of 17) CpG 309 NM_001163216 14184 Mm.6904 NM_008010 ENSMUSG00000054252 Fgfr3 CD333|FR3|Fgfr-3|Flg-2|HBGFR|Mfr3|sam3 fibroblast growth factor receptor 3 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-75 chr9 69291157 69291422 + 1.57096726280955 NA intron (NM_001289916, intron 1 of 9) CpG 1448 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-68 chr9 21335200 21335412 + 1.57096726280955 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) -2522 NM_152808 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-17 chr15 32328616 32328906 + 1.57096726280955 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 83948 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-4 chr1 168229328 168229646 + 1.57096726280955 NA intron (NM_183355, intron 2 of 8) intron (NM_183355, intron 2 of 8) 202682 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-34 chr17 78312369 78312560 + 1.57096726280955 NA intron (NM_015800, intron 5 of 16) intron (NM_015800, intron 5 of 16) 105688 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-35 chr8 3424371 3424578 + 1.57096726280955 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 31466 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-15 chr13 112063322 112063548 + 1.57096726280955 NA Intergenic Intergenic 195499 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 - predicted gene 15326 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-18 chr13 28680925 28681112 + 1.57096726280955 NA intron (NR_045054, intron 3 of 7) intron (NR_045054, intron 3 of 7) 29855 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-35 chr18 36017913 36018120 + 1.57096726280955 NA exon (NM_001167891, exon 10 of 10) exon (NM_001167891, exon 10 of 10) 53186 NR_110349 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-11 chr12 76562434 76562646 + 1.57096726280955 NA intron (NM_153804, intron 3 of 18) intron (NM_153804, intron 3 of 18) -14615 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-78 chrX 72274199 72274395 + 1.57096726280955 NA intron (NM_017369, intron 1 of 8) intron (NM_017369, intron 1 of 8) 424 NM_017369 14404 Mm.391288 NM_017369 ENSMUSG00000031340 Gabre - gamma-aminobutyric acid (GABA) A receptor, subunit epsilon protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-13 chr4 106959405 106959751 + 1.57096726280955 NA intron (NM_001355532, intron 1 of 14) intron (NM_001355532, intron 1 of 14) 36393 NM_001355532 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-59 chr6 117305479 117305681 + 1.57096726280955 NA Intergenic Intergenic 137045 NM_021704 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-46 chr2 165894913 165895140 + 1.57096726280955 NA Intergenic Intergenic -10188 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-27 chr14 66103230 66103458 + 1.57096726280955 NA intron (NM_007940, intron 6 of 18) B4|SINE|B4 7316 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-16 chr14 8367870 8368077 + 1.57096726280955 NA intron (NR_151471, intron 2 of 3) intron (NR_151471, intron 2 of 3) 533 NR_151471 102632156 NR_151471 2610318M16Rik - RIKEN cDNA 2610318M16 gene ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-7 chr11 31229916 31230156 + 1.57096726280955 NA Intergenic Intergenic 140025 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-21 chr9 102291729 102291955 + 1.57096726280955 NA intron (NM_173447, intron 1 of 15) intron (NM_173447, intron 1 of 15) 13133 NR_106163 102466241 NR_106163 ENSMUSG00000098521 Mir7243 Gm27363|mmu-mir-7243 microRNA 7243 ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-14 chr13 63188519 63188733 + 1.57096726280955 NA intron (NM_001289926, intron 7 of 15) intron (NM_001289926, intron 7 of 15) -51403 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-19 chr8 103317094 103317343 + 1.57096726280955 NA Intergenic MIRb|SINE|MIR 30316 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-34 chr7 99308606 99308866 + 1.57096726280955 NA intron (NM_001048167, intron 1 of 2) intron (NM_001048167, intron 1 of 2) 40390 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955 chr1 37919252 37919461 + 1.57096726280955 NA Intergenic Intergenic -2863 NM_001033427 332427 Mm.332981 NM_001033427 ENSMUSG00000061584 Lyg2 Gm776 lysozyme G-like 2 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-43 chr2 61062316 61062532 + 1.57096726280955 NA Intergenic Intergenic -87273 NR_045335 100038493 Mm.388076 NR_045335 ENSMUSG00000075325 Gm13582 - predicted gene 13582 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-31 chr16 96151512 96151739 + 1.57096726280955 NA intron (NM_207301, intron 1 of 4) intron (NM_207301, intron 1 of 4) 6206 NM_207301 71446 Mm.255063 NM_207301 ENSMUSG00000023147 Wrb 5530402J05Rik|C030018G21Rik|Chd5 tryptophan rich basic protein protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-22 chrX 96101733 96101942 + 1.57096726280955 NA intron (NM_010833, intron 1 of 12) ID_B1|SINE|B4 5792 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-14 chr11 103039420 103039668 + 1.57096726280955 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 11001 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-21 chr2 51912972 51913247 + 1.57096726280955 NA Intergenic Intergenic 20226 NM_001355607 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-8 chr11 102576800 102577005 + 1.57096726280955 NA intron (NR_040286, intron 2 of 2) intron (NR_040286, intron 2 of 2) 2217 NR_040286 100040792 Mm.277966 NR_040286 ENSMUSG00000078640 Gm11627 - predicted gene 11627 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-36 chr18 36501090 36501277 + 1.57096726280955 NA Intergenic Intergenic 14622 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-66 chr8 127147365 127147552 + 1.57096726280955 NA intron (NM_001122850, intron 1 of 15) intron (NM_001122850, intron 1 of 15) 83402 NM_001309391 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-26 chr5 29949557 29949769 + 1.57096726280955 NA Intergenic Intergenic -63451 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955 chr1 82574911 82575140 + 1.57096726280955 NA intron (NM_007735, intron 1 of 47) intron (NM_007735, intron 1 of 47) 11824 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-23 chr13 63749813 63750014 + 1.57096726280955 NA Intergenic B3A|SINE|B2 -15615 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-33 chr7 58730434 58730673 + 1.57096726280955 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 72351 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-10 chr12 9013760 9013967 + 1.57096726280955 NA intron (NM_172470, intron 18 of 27) intron (NM_172470, intron 18 of 27) -16134 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-10 chr11 59387689 59387998 + 1.57096726280955 NA Intergenic Intergenic -12190 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-3 chr10 99233646 99233896 + 1.57096726280955 NA Intergenic Intergenic -29460 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-52 chr4 134745798 134745985 + 1.57096726280955 NA 3' UTR (NM_145554, exon 9 of 9) 3' UTR (NM_145554, exon 9 of 9) 22113 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-17 chr12 112602936 112603169 + 1.57096726280955 NA intron (NM_198411, intron 5 of 22) intron (NM_198411, intron 5 of 22) 14268 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955 chr1 72076703 72076896 + 1.57096726280955 NA Intergenic Intergenic -71604 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-28 chr14 76659830 76660061 + 1.57096726280955 NA Intergenic Intergenic -17623 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-61 chr7 37561851 37562050 + 1.57096726280955 NA intron (NM_172385, intron 4 of 5) intron (NM_172385, intron 4 of 5) 207802 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-14 chr4 110177849 110178071 + 1.57096726280955 NA Intergenic Intergenic 108874 NM_001357190 15572 Mm.3970 NM_010488 ENSMUSG00000028546 Elavl4 Elav|Hud|PNEM ELAV like RNA binding protein 4 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-19 chr15 98530901 98531107 + 1.57096726280955 NA intron (NM_001289440, intron 3 of 8) intron (NM_001289440, intron 3 of 8) 3265 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-71 chr9 49945849 49946096 + 1.57096726280955 NA Intergenic Intergenic -146579 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-73 chr9 56216892 56217089 + 1.57096726280955 NA intron (NM_172924, intron 6 of 6) intron (NM_172924, intron 6 of 6) -55920 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-7 chr19 10785813 10786024 + 1.57096726280955 NA non-coding (NR_027805, exon 4 of 4) non-coding (NR_027805, exon 4 of 4) 44140 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-8 chr10 79681446 79681633 + 1.57096726280955 NA promoter-TSS (NM_177613) promoter-TSS (NM_177613) -656 NM_001359818 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-20 chr13 48314116 48314334 + 1.57096726280955 NA Intergenic Intergenic -40341 NR_045162 320315 Mm.185120 NR_045162 ENSMUSG00000097326 A330048O09Rik - RIKEN cDNA A330048O09 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-30 chr15 101354480 101354680 + 1.57096726280955 NA intron (NM_028770, intron 4 of 8) intron (NM_028770, intron 4 of 8) -14772 NR_035462 100316694 NR_035462 ENSMUSG00000088459 Mir1941 mmu-mir-1941 microRNA 1941 ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-32 chr7 44915485 44915717 + 1.57096726280955 NA intron (NM_001077264, intron 4 of 22) intron (NM_001077264, intron 4 of 22) 13889 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-51 chr4 100252001 100252266 + 1.57096726280955 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 156342 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-76 chr9 82972995 82973248 + 1.57096726280955 NA intron (NM_001081216, intron 4 of 39) intron (NM_001081216, intron 4 of 39) 2368 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-69 chr9 35018775 35018980 + 1.57096726280955 NA intron (NM_001190912, intron 9 of 15) intron (NM_001190912, intron 9 of 15) -97851 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-3 chr1 153690699 153690888 + 1.57096726280955 NA intron (NM_001357525, intron 5 of 6) intron (NM_001357525, intron 5 of 6) 25120 NM_001347115 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-16 chr12 21225562 21225841 + 1.57096726280955 NA intron (NM_001004364, intron 12 of 26) intron (NM_001004364, intron 12 of 26) 60583 NM_008403 16413 Mm.273333 NM_008403 ENSMUSG00000062352 Itgb1bp1 AI449260|AU019480|Icap1 integrin beta 1 binding protein 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-45 chr2 113655297 113655485 + 1.57096726280955 NA intron (NM_001285459, intron 13 of 16) intron (NM_001285459, intron 13 of 16) -29699 NM_001287818 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-11 chr11 70237256 70237511 + 1.57096726280955 NA TTS (NM_173742) TTS (NM_173742) 531 NM_001177601 104457 Mm.30016 NM_026757 ENSMUSG00000020831 0610010K14Rik 1110020A23Rik|AL033328|AU045833|Bap18 RIKEN cDNA 0610010K14 gene protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-29 chr14 77195984 77196189 + 1.57096726280955 NA intron (NM_001253759, intron 1 of 19) intron (NM_001253759, intron 1 of 19) 39323 NM_172813 239188 Mm.441158 NM_172813 ENSMUSG00000022012 Enox1 B230207J08|D230005D02Rik ecto-NOX disulfide-thiol exchanger 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-25 chr4 129304331 129304575 + 1.57096726280955 NA intron (NM_023485, intron 2 of 4) intron (NM_023485, intron 2 of 4) 16832 NM_023485 68828 Mm.132243 NM_023485 ENSMUSG00000001333 Sync 1110057H03Rik|SNIP4 syncoilin protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-18 chr15 82167673 82167905 + 1.57096726280955 NA intron (NM_033218, intron 1 of 18) RSINE1|SINE|B4 20520 NM_033218 20788 Mm.38016 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-33 chr17 63797839 63798035 + 1.57096726280955 NA Intergenic Intergenic -66044 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-12 chr12 86787136 86787345 + 1.57096726280955 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 52871 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-56 chr6 16957692 16957893 + 1.57096726280955 NA Intergenic Intergenic -59351 NM_031198 21426 Mm.36217 NM_031198 ENSMUSG00000029553 Tfec BB107417|Tcfec|bHLHe34 transcription factor EC protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-12 chr11 99076448 99076660 + 1.57096726280955 NA intron (NM_172564, intron 4 of 12) B1_Mus2|SINE|Alu 12752 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-54 chr4 139195205 139195446 + 1.57096726280955 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 1214 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-16 chr6 94636916 94637123 + 1.57096726280955 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -30604 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-42 chr2 30391376 30391594 + 1.57096726280955 NA promoter-TSS (NM_001290508) promoter-TSS (NM_001290508) -769 NM_020329 57170 Mm.285167 NM_020329 ENSMUSG00000026856 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-19 chr13 37941866 37942073 + 1.57096726280955 NA intron (NM_001177869, intron 10 of 11) intron (NM_001177869, intron 10 of 11) 52239 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-3 chr1 161465676 161465927 + 1.57096726280955 NA Intergenic Intergenic -28856 NM_183391 240873 Mm.276823 NM_183391 ENSMUSG00000066755 Tnfsf18 Gitrl|Tnlg2a tumor necrosis factor (ligand) superfamily, member 18 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-62 chr7 109581240 109581600 + 1.57096726280955 NA intron (NM_001001326, intron 1 of 19) B1_Mur4|SINE|Alu 35148 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-28 chr5 76893461 76893745 + 1.57096726280955 NA intron (NM_173765, intron 5 of 15) B3A|SINE|B2 11911 NM_173765 231326 Mm.39271 NM_173765 ENSMUSG00000055923 Aasdh A230062G08Rik|A830035E16|Acsf4|U26 aminoadipate-semialdehyde dehydrogenase protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-38 chr19 4309582 4309779 + 1.57096726280955 NA Intergenic Intergenic -3458 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-26 chr14 18939739 18940024 + 1.57096726280955 NA Intergenic Intergenic -45614 NM_001360327 218793 Mm.23551 NM_144839 ENSMUSG00000058317 Ube2e2 BC016265 ubiquitin-conjugating enzyme E2E 2 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-39 chr9 120000006 120000229 + 1.57096726280955 NA Intergenic Intergenic -15375 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-9 chr10 111472749 111473017 + 1.57096726280955 NA promoter-TSS (NM_015781) promoter-TSS (NM_015781) -344 NM_001358932 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-41 chr2 18063350 18063573 + 1.57096726280955 NA intron (NR_149308, intron 1 of 9) intron (NR_149308, intron 1 of 9) -1124 NM_001252560 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-9 chr11 115512484 115512705 + 1.57096726280955 NA intron (NM_008258, intron 1 of 4) intron (NM_008258, intron 1 of 4) 1799 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Jpt1 Hn1 Jupiter microtubule associated homolog 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-24 chr4 126840471 126840682 + 1.57096726280955 NA intron (NM_001035525, intron 13 of 23) intron (NM_001035525, intron 13 of 23) 86806 NM_001035526 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-25 chr13 71436089 71436332 + 1.57096726280955 NA Intergenic Intergenic 329121 NR_130325 100316804 NR_130325 ENSMUSG00000080580 Mir466f-4 Mirn466f-4|mmu-mir-466f-4 microRNA 466f-4 ncRNA unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-20 chr9 59661892 59662091 + 1.57096726280955 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 5623 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-23 chr2 148730419 148730636 + 1.57096726280955 NA intron (NM_019632, intron 1 of 10) intron (NM_019632, intron 1 of 10) 1893 NM_019632 17957 Mm.274308 NM_019632 ENSMUSG00000027438 Napb Brp14|E161|I47|SNARE|b-SNAP N-ethylmaleimide sensitive fusion protein attachment protein beta protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-65 chr8 111834373 111834592 + 1.57096726280955 NA intron (NM_011801, intron 4 of 6) intron (NM_011801, intron 4 of 6) 19828 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-38 chr9 58133005 58133214 + 1.57096726280955 NA promoter-TSS (NM_001162476) promoter-TSS (NM_001162476) -966 NM_001162476 20897 Mm.10801 NM_009291 ENSMUSG00000032327 Stra6 AI891933 stimulated by retinoic acid gene 6 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-67 chr8 128165772 128165984 + 1.57096726280955 NA Intergenic Intergenic 112347 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-50 chr4 45297271 45297469 + 1.57096726280955 NA intron (NM_027266, intron 1 of 8) intron (NM_027266, intron 1 of 8) 202 NM_027266 69934 Mm.46761 NM_027266 ENSMUSG00000035601 Trmt10b 2610042J10Rik|Rg9mtd3|Rnmtd3 tRNA methyltransferase 10B protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-6 chr10 16991118 16991320 + 1.57096726280955 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 104563 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-9 chr2 104995157 104995357 + 1.57096726280955 NA intron (NM_177600, intron 17 of 17) intron (NM_177600, intron 17 of 17) 21770 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-31 chr5 146834575 146834890 + 1.57096726280955 NA intron (NM_019647, intron 3 of 5) intron (NM_019647, intron 3 of 5) 1842 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-22 chr13 63261794 63262017 + 1.57096726280955 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 21876 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-74 chr9 65555150 65555395 + 1.57096726280955 NA 3' UTR (NM_153119, exon 6 of 6) 3' UTR (NM_153119, exon 6 of 6) 24815 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-6 chr14 44833972 44834201 + 1.57096726280955 NA Intergenic Intergenic 25289 NM_008962 19214 Mm.5105 NM_008962 ENSMUSG00000071489 Ptgdr DP|PGD prostaglandin D receptor protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-17 chr6 114928995 114929226 + 1.57096726280955 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -7289 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-13 chr11 102219246 102219476 + 1.57096726280955 NA intron (NM_001284248, intron 3 of 28) intron (NM_001284248, intron 3 of 28) 10789 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-4 chr13 16759734 16759972 + 1.57096726280955 NA Intergenic Intergenic -736430 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-53 chr4 136600122 136600338 + 1.57096726280955 NA intron (NM_001356567, intron 1 of 19) intron (NM_001356567, intron 1 of 19) 2493 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-8 chr2 4479658 4479865 + 1.57096726280955 NA intron (NM_001177843, intron 3 of 23) intron (NM_001177843, intron 3 of 23) 78785 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-37 chr9 6427239 6427479 + 1.57096726280955 NA Intergenic Intergenic -160812 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-58 chr6 99466121 99466332 + 1.57096726280955 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -30881 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-47 chr2 173742717 173742925 + 1.57096726280955 NA intron (NM_019806, intron 1 of 5) intron (NM_019806, intron 1 of 5) 5250 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding unique_peak2_2_9_-1.98988750972238_2.32698434002617_1.57096726280955-10 chr2 145752896 145753101 + 1.57096726280955 NA non-coding (NR_033220, exon 4 of 4) non-coding (NR_033220, exon 4 of 4) -33118 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-30 chr5 140507829 140508039 + 1.57096726280955 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 2325 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-77 chr9 110101551 110101757 + 1.57096726280955 NA promoter-TSS (NM_001252683) promoter-TSS (NM_001252683) -567 NM_001252683 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-64 chr8 71679626 71679829 + 1.57096726280955 NA exon (NM_010589, exon 6 of 25) exon (NM_010589, exon 6 of 25) 3344 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-32 chr17 12324942 12325142 + 1.57096726280955 NA non-coding (NR_045290, exon 2 of 2) non-coding (NR_045290, exon 2 of 2) 6189 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-39 chr19 29112540 29112855 + 1.57096726280955 NA intron (NM_021525, intron 1 of 8) intron (NM_021525, intron 1 of 8) 11322 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-13 chr12 99264282 99264564 + 1.57096726280955 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -101615 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-4 chr1 162471174 162471377 + 1.57096726280955 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 6759 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-44 chr2 85052364 85052584 + 1.57096726280955 NA exon (NM_001081260, exon 3 of 12) exon (NM_001081260, exon 3 of 12) 2014 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-2 chr1 88880750 88880954 + 1.57096726280955 NA Intergenic Intergenic 125962 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA unique_peak1_10_3_1.19328536174355_2.59664268087177_1.57096726280955-7 chr10 27971256 27971591 + 1.57096726280955 NA Intergenic Intergenic -103397 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak2_3_9_-1.57777809152308_2.53303904912582_1.57096726280955-22 chr2 79545184 79545412 + 1.57096726280955 NA Intergenic Intergenic -88662 NM_010894 18012 Mm.4636 NM_010894 ENSMUSG00000034701 Neurod1 BETA2|BHF-1|Nd1|Neurod|bHLHa3 neurogenic differentiation 1 protein-coding common_peak2_70_87_-0.594810876930566_6.16202618017201_1.56901764734008 chr3 37639809 37640701 + 1.56901764734008 NA intron (NM_001305441, intron 1 of 1) CpG 308 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak1_105_58_0.556072026334775_6.16067906252923_1.56901764734008 chr15 78802158 78803447 + 1.56901764734008 NA intron (NM_130859, intron 1 of 20) CpG-5060 240 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak1_105_58_0.556072026334775_6.16067906252923_1.56901764734008-2 chr15 102103091 102103654 + 1.56901764734008 NA intron (NM_001355636, intron 1 of 28) intron (NM_001355636, intron 1 of 28) 438 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_106_123_-0.502030273357716_6.70318117370802_1.56756486921162 chr17 29032062 29033365 + 1.56756486921162 NA promoter-TSS (NM_013663) promoter-TSS (NM_013663) 53 NR_036613 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding common_peak1_150_88_0.469864473290642_6.71066566761172_1.56756486921162 chr3 30793345 30793891 + 1.56756486921162 NA intron (NM_001357528, intron 1 of 8) CpG 742 NM_001357528 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak1_36_53_-0.823926761106026_5.34292412161046_1.56692319994464 chr10 17106408 17107092 + 1.56692319994464 NA Intergenic Intergenic -10968 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_37_53_-0.785724047618321_5.36202547835431_1.56692319994464-2 chr5 139929346 139930042 + 1.56692319994464 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 21751 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_36_53_-0.823926761106026_5.34292412161046_1.56692319994464 chr12 28649204 28649948 + 1.56692319994464 NA promoter-TSS (NR_104608) promoter-TSS (NR_104608) -26 NR_104608 19819 Mm.10152 NM_011275 ENSMUSG00000020630 Rnaseh1 - ribonuclease H1 protein-coding common_peak2_37_53_-0.785724047618321_5.36202547835431_1.56692319994464 chr18 24111594 24112857 + 1.56692319994464 NA intron (NM_172625, intron 3 of 4) intron (NM_172625, intron 3 of 4) 9594 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding common_peak1_37_53_-0.785724047618321_5.36202547835431_1.56692319994464 chr1 79580672 79581416 + 1.56692319994464 NA Intergenic Intergenic 90928 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463-5 chr3 121600945 121601483 + 1.56692319994463 NA Intergenic Intergenic 42271 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_64_31_0.738140093635748_5.36907004681787_1.56692319994463 chr14 30875348 30876268 + 1.56692319994463 NA 3' UTR (NM_028839, exon 8 of 8) 3' UTR (NM_028839, exon 8 of 8) -3449 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding unique_peak1_64_31_0.738140093635748_5.36907004681787_1.56692319994463 chr19 46505207 46506187 + 1.56692319994463 NA intron (NM_053100, intron 1 of 5) intron (NM_053100, intron 1 of 5) 4049 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463-6 chrX 7841886 7842597 + 1.56692319994463 NA exon (NM_138604, exon 1 of 9) exon (NM_138604, exon 1 of 9) 159 NM_001290537 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding common_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463-4 chr3 116189672 116190415 + 1.56692319994463 NA Intergenic Intergenic -60355 NM_011693 22329 Mm.76649 NM_011693 ENSMUSG00000027962 Vcam1 CD106|Vcam-1 vascular cell adhesion molecule 1 protein-coding common_peak2_63_31_0.715930085071308_5.35796504253565_1.56692319994463 chr13 80940410 80940828 + 1.56692319994463 NA non-coding (NR_103550, exon 1 of 5) non-coding (NR_103550, exon 1 of 5) 216 NR_103550 71416 Mm.415500 NR_103550 5430425K12Rik - RIKEN cDNA 5430425K12 gene ncRNA common_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463 chr14 54360850 54361547 + 1.56692319994463 NA intron (NM_026936, intron 1 of 9) CpG 357 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding common_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463-2 chr19 5724054 5724435 + 1.56692319994463 NA intron (NM_001114595, intron 1 of 17) intron (NM_001114595, intron 1 of 17) 2073 NM_001114595 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding unique_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463 chr17 5975191 5976162 + 1.56692319994463 NA promoter-TSS (NM_001113351) promoter-TSS (NM_001113351) 90 NM_011523 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak1_63_31_0.715930085071308_5.35796504253565_1.56692319994463-3 chr2 165189861 165190569 + 1.56692319994463 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 44522 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_26_41_-0.912715592305358_4.93595962662608_1.56490221051684-2 chr4 116685172 116685464 + 1.56490221051684 NA promoter-TSS (NM_011034) promoter-TSS (NM_011034) -281 NM_011034 18477 Mm.30929 NM_011034 ENSMUSG00000028691 Prdx1 MSP23|NkefA|OSF-3|OSF3|PAG|Paga|PrdxI|PrxI|TDX2|TPxA|Tdpx2|prx1 peroxiredoxin 1 protein-coding common_peak2_26_41_-0.912715592305358_4.93595962662608_1.56490221051684-3 chr5 100568237 100569098 + 1.56490221051684 NA intron (NM_139198, intron 1 of 4) intron (NM_139198, intron 1 of 4) 3538 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding unique_peak1_49_22_0.838736906095296_4.94293040910466_1.56490221051684 chr15 101366371 101367011 + 1.56490221051684 NA intron (NM_028770, intron 1 of 8) intron (NM_028770, intron 1 of 8) -2661 NR_035462 100316694 NR_035462 ENSMUSG00000088459 Mir1941 mmu-mir-1941 microRNA 1941 ncRNA common_peak2_26_41_-0.912715592305358_4.93595962662608_1.56490221051684-4 chr7 82866504 82867002 + 1.56490221051684 NA promoter-TSS (NM_175366) promoter-TSS (NM_175366) -580 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak2_26_41_-0.912715592305358_4.93595962662608_1.56490221051684-5 chr8 36725049 36725638 + 1.56490221051684 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 7711 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_26_41_-0.912715592305358_4.93595962662608_1.56490221051684 chr18 37644360 37644696 + 1.56490221051684 NA promoter-TSS (NM_175770) promoter-TSS (NM_175770) -324 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak2_49_22_0.838736906095296_4.94293040910466_1.56490221051684 chr13 17992809 17993204 + 1.56490221051684 NA intron (NM_025904, intron 1 of 2) intron (NM_025904, intron 1 of 2) 345 NM_025904 67008 Mm.252918 NM_025904 ENSMUSG00000075054 Yae1d1 1600012F09Rik Yae1 domain containing 1 protein-coding common_peak1_49_22_0.838736906095296_4.94293040910466_1.56490221051684 chr8 25090477 25091097 + 1.56490221051684 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 11024 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_26_41_-0.912715592305358_4.93595962662608_1.56490221051684 chr14 8304965 8305509 + 1.56490221051684 NA intron (NM_001360337, intron 1 of 4) intron (NM_001360337, intron 1 of 4) 4540 NM_183187 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding common_peak1_185_197_-0.385126457872618_7.4367933911433_1.56449639507898 chr9 58311456 58313143 + 1.56449639507898 NA exon (NM_010729, exon 1 of 7) exon (NM_010729, exon 1 of 7) 913 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_193_118_0.40973781152989_7.09968666907289_1.56429874984436 chr3 101108729 101110994 + 1.56429874984436 NA intron (NM_011197, intron 1 of 8) CpG 305 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak2_74_38_0.657732245517514_5.61426834162101_1.56409098239262 chr8 120487327 120488134 + 1.56409098239262 NA Intergenic CpG -1136 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_45_62_-0.734426621703662_5.61006661264809_1.56409098239262 chr1 135861566 135862285 + 1.56409098239262 NA Intergenic Intergenic 21064 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak1_74_38_0.657732245517514_5.61426834162101_1.56409098239262-2 chr18 38171520 38172818 + 1.56409098239262 NA Intergenic Intergenic 37593 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_75_38_0.676706256109654_5.62375534691708_1.56409098239262 chr15 61157898 61158592 + 1.56409098239262 NA Intergenic Intergenic -236975 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak1_75_38_0.676706256109654_5.62375534691708_1.56409098239262-3 chr9 108567603 108568583 + 1.56409098239262 NA promoter-TSS (NR_029947) promoter-TSS (NR_029947) -226 NR_029577 387186 NR_029577 ENSMUSG00000105497 Mir191 Mirn191|mir-191|mmu-mir-191 microRNA 191 ncRNA common_peak1_75_38_0.676706256109654_5.62375534691708_1.56409098239262-2 chr9 50775246 50775883 + 1.56409098239262 NA intron (NR_045601, intron 1 of 13) CpG 339 NR_045601 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding common_peak1_74_38_0.657732245517514_5.61426834162101_1.56409098239262 chr17 26605980 26606539 + 1.56409098239262 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 44747 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-19 chr7 73498448 73498665 + 1.56314192529759 NA intron (NM_001081345, intron 12 of 38) intron (NM_001081345, intron 12 of 38) 43190 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-10 chr14 48228435 48228638 + 1.56314192529759 NA TTS (NR_003630) TTS (NR_003630) 29820 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-21 chr8 34427664 34427857 + 1.56314192529759 NA Intergenic Intergenic 212556 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-15 chr3 144190832 144191025 + 1.56314192529759 NA intron (NM_001161769, intron 4 of 4) intron (NM_001161769, intron 4 of 4) 11404 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-3 chr11 96947631 96947868 + 1.56314192529759 NA intron (NR_003293, intron 2 of 5) intron (NR_003293, intron 2 of 5) 3603 NR_003293 319371 Mm.436865 NR_003293 ENSMUSG00000078700 D030028A08Rik - RIKEN cDNA D030028A08 gene ncRNA unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759 chr1 40376674 40376901 + 1.56314192529759 NA Intergenic Intergenic 52198 NM_133193 107527 Mm.155583 NM_133193 ENSMUSG00000070942 Il1rl2 AI481289|AW551444|IL-1Rrp2 interleukin 1 receptor-like 2 protein-coding unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-8 chr9 67115871 67116085 + 1.56314192529759 NA Intergenic B4|SINE|B4 13678 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-7 chr13 36694040 36694263 + 1.56314192529759 NA Intergenic Intergenic 40326 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-11 chr14 62813890 62814179 + 1.56314192529759 NA intron (NR_045503, intron 3 of 6) MTD|LTR|ERVL-MaLR -23656 NM_175546 268752 Mm.1960 NM_175546 ENSMUSG00000014547 Wdfy2 5830485M08|B130024L21Rik|ProF|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-20 chr7 112294020 112294244 + 1.56314192529759 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 68296 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-16 chr4 82054050 82054240 + 1.56314192529759 NA intron (NR_151604, intron 1 of 5) intron (NR_151604, intron 1 of 5) -11235 NR_040659 545641 Mm.216028 NR_040659 ENSMUSG00000085022 Gm5860 EG545641 predicted gene 5860 ncRNA unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-12 chr16 17559229 17559444 + 1.56314192529759 NA exon (NM_029053, exon 3 of 9) exon (NM_029053, exon 3 of 9) 1911 NM_029053 74685 Mm.38634 NM_029053 ENSMUSG00000022759 Lrrc74b 4930451C15Rik|mCG12354|mCP17390 leucine rich repeat containing 74B protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-8 chr13 91165607 91165833 + 1.56314192529759 NA intron (NM_025770, intron 2 of 7) intron (NM_025770, intron 2 of 7) 58267 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-4 chr14 7815217 7815431 + 1.56314192529759 NA Intergenic L1MD3|LINE|L1 -2633 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-17 chr4 129323344 129323563 + 1.56314192529759 NA intron (NM_009030, intron 3 of 11) B2_Mm2|SINE|B2 11917 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4, chromatin remodeling factor protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-23 chr9 123247867 123248103 + 1.56314192529759 NA Intergenic Intergenic 12804 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-2 chr1 135491241 135491455 + 1.56314192529759 NA intron (NM_173437, intron 3 of 28) (TC)n|Simple_repeat|Simple_repeat -36665 NR_049188 100885827 NR_049188 ENSMUSG00000093515 Mir1231 Gm23720|mir-1231|mmu-mir-1231 microRNA 1231 ncRNA unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-9 chr13 97779062 97779258 + 1.56314192529759 NA Intergenic Intergenic 28048 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-2 chr1 168136621 168136906 + 1.56314192529759 NA intron (NM_008783, intron 7 of 7) intron (NM_008783, intron 7 of 7) 295406 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-13 chr17 81497579 81497773 + 1.56314192529759 NA intron (NR_104580, intron 2 of 8) intron (NR_104580, intron 2 of 8) 240711 NM_001286684 20541 Mm.265834 NM_011406 ENSMUSG00000054640 Slc8a1 AI852629|AV344025|D930008O12Rik|Ncx1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-7 chr3 92283544 92283775 + 1.56314192529759 NA Intergenic Intergenic -1645 NM_001309382 100042514 Mm.6853 NM_001309382 ENSMUSG00000074445 Sprr2a3 - small proline-rich protein 2A3 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-5 chr11 51265228 51265436 + 1.56314192529759 NA intron (NM_001304744, intron 1 of 10) intron (NM_001304744, intron 1 of 10) -1670 NM_001358281 193286 Mm.80975 NM_177567 ENSMUSG00000045942 BC049762 4930503F14 cDNA sequence BC049762 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-6 chr12 109436687 109436883 + 1.56314192529759 NA Intergenic Intergenic -16038 NR_033813 13386 Mm.157069 NM_010052 ENSMUSG00000040856 Dlk1 AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1 delta like non-canonical Notch ligand 1 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-3 chr1 167275029 167275218 + 1.56314192529759 NA intron (NM_030724, intron 1 of 6) ID_B1|SINE|B4 10004 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-5 chr17 5414150 5414364 + 1.56314192529759 NA intron (NM_027457, intron 3 of 3) intron (NM_027457, intron 3 of 3) 4510 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-4 chr11 31614789 31614977 + 1.56314192529759 NA Intergenic Intergenic 56979 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak2_0_6_-3.04909495954683_1.28280744228419_1.56314192529759-6 chr19 59336595 59336799 + 1.56314192529759 NA intron (NM_001033222, intron 1 of 4) intron (NM_001033222, intron 1 of 4) 9083 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-18 chr6 112284920 112285145 + 1.56314192529759 NA intron (NM_144799, intron 1 of 5) (TTTG)n|Simple_repeat|Simple_repeat 5287 NR_045987 100503613 Mm.136719 NM_177012 5031434C07Rik - RIKEN cDNA 5031434C07 gene ncRNA unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759 chr1 63944956 63945148 + 1.56314192529759 NA Intergenic Intergenic -19675 NR_027824 433315 Mm.342696 NM_001013800 ENSMUSG00000044689 Gm13749 - predicted gene 13749 ncRNA unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-22 chr9 63260243 63260433 + 1.56314192529759 NA intron (NM_011840, intron 15 of 21) intron (NM_011840, intron 15 of 21) -111377 NM_001163758 207667 Mm.36349 NM_172446 ENSMUSG00000022245 Skor1 AV273001|C230094B15Rik|Corl1|Lbxcor1 SKI family transcriptional corepressor 1 protein-coding unique_peak1_6_1_1.54580905293841_1.77290452646921_1.56314192529759-14 chr2 71668058 71668270 + 1.56314192529759 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -51253 NR_037979 381371 Mm.330284 NM_201366 ENSMUSG00000064263 Platr26 Gm1631 pluripotency associated transcript 26 ncRNA common_peak2_100_117_-0.513145150104428_6.62607047430963_1.56225748717905 chr4 152185445 152186710 + 1.56225748717905 NA promoter-TSS (NM_001146057) promoter-TSS (NM_001146057) -57 NM_001146057 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_99_54_0.573884169054404_6.06830179805186_1.56181679352091 chr3 27695268 27696035 + 1.56181679352091 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 14801 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_65_82_-0.61502842652241_6.06752521808572_1.56181679352091 chr4 106847572 106848684 + 1.56181679352091 NA Intergenic Intergenic -43121 NM_001347159 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_76_93_-0.573754399506448_6.26771165192441_1.56164080704067-2 chr4 107879321 107880715 + 1.56164080704067 NA intron (NM_001282737, intron 1 of 4) CpG 263 NM_001282737 17149 Mm.808 NM_001282737 ENSMUSG00000028609 Magoh Mago-m|Mos2 mago homolog, exon junction complex core component protein-coding common_peak2_76_93_-0.573754399506448_6.26771165192441_1.56164080704067 chr13 47105624 47106725 + 1.56164080704067 NA promoter-TSS (NM_025900) promoter-TSS (NM_025900) 47 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding common_peak1_113_63_0.542944077199357_6.27147203859968_1.56164080704065 chr8 41373613 41375211 + 1.56164080704065 NA intron (NM_019734, intron 1 of 13) CpG 285 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak2_33_49_-0.834025332438273_5.22684352355559_1.56058662248874 chr12 75818354 75819028 + 1.56058662248874 NA intron (NM_001005510, intron 1 of 115) CpG 373 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak2_33_49_-0.834025332438273_5.22684352355559_1.56058662248874-2 chr9 56128868 56129307 + 1.56058662248874 NA TTS (NM_011193) TTS (NM_011193) 31983 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_59_28_0.765496570498313_5.24072928037673_1.56058662248873 chr10 52233701 52234531 + 1.56058662248873 NA intron (NM_001347444, intron 1 of 9) CpG 497 NM_025705 66686 Mm.62982 NM_025705 ENSMUSG00000019891 Dcbld1 4631413K11Rik discoidin, CUB and LCCL domain containing 1 protein-coding common_peak2_176_106_0.431714721575743_6.95732434718902_1.56014732343153 chr8 36094311 36095440 + 1.56014732343153 NA promoter-TSS (NM_172911) promoter-TSS (NM_172911) 47 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608-2 chr2 135526228 135527114 + 1.55933022783608 NA Intergenic Intergenic 56549 NR_015544 320684 Mm.421433 NR_015544 ENSMUSG00000085631 9630028H03Rik - RIKEN cDNA 9630028H03 gene ncRNA common_peak2_54_25_0.798392583209847_5.09963600974602_1.55933022783608 chr3 101571197 101571673 + 1.55933022783608 NA Intergenic Intergenic 33272 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608 chr14 76737367 76738496 + 1.55933022783608 NA Intergenic Intergenic -22200 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_54_25_0.798392583209847_5.09963600974602_1.55933022783608-2 chr9 44479164 44479696 + 1.55933022783608 NA Intergenic Intergenic -3395 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_29_45_-0.893029410857884_5.07704725062807_1.55933022783608-2 chr13 113404060 113404426 + 1.55933022783608 NA Intergenic Intergenic 98601 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608-4 chr4 153957375 153958127 + 1.55933022783608 NA intron (NM_001163019, intron 1 of 2) intron (NM_001163019, intron 1 of 2) 514 NM_001163019 97159 Mm.7066 NM_175287 ENSMUSG00000047613 A430005L14Rik C79672 RIKEN cDNA A430005L14 gene protein-coding common_peak2_29_45_-0.893029410857884_5.07704725062807_1.55933022783608 chr10 80161088 80161435 + 1.55933022783608 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -6578 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608-3 chr3 89270560 89271025 + 1.55933022783608 NA promoter-TSS (NM_009057) promoter-TSS (NM_009057) -222 NM_009057 19729 Mm.17958 NM_009057 ENSMUSG00000027953 Slc50a1 MmSWEET1|Rag1ap1|Rga solute carrier family 50 (sugar transporter), member 1 protein-coding unique_peak2_29_45_-0.893029410857884_5.07704725062807_1.55933022783608 chr1 34237819 34238376 + 1.55933022783608 NA intron (NM_001276764, intron 60 of 102) intron (NM_001276764, intron 60 of 102) 77767 NM_010081 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding unique_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608-3 chr9 99575873 99576447 + 1.55933022783608 NA intron (NM_031403, intron 1 of 7) CpG 361 NM_031403 83703 Mm.31324 NM_031403 ENSMUSG00000032469 Dbr1 AW018415 debranching RNA lariats 1 protein-coding unique_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608-2 chr7 64906121 64907035 + 1.55933022783608 NA intron (NM_183087, intron 2 of 9) intron (NM_183087, intron 2 of 9) -33538 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak1_54_25_0.798392583209847_5.09963600974602_1.55933022783608 chr10 67716674 67717392 + 1.55933022783608 NA Intergenic Intergenic -145074 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_94_111_-0.525589548331823_6.54456014789169_1.55864784258971 chr8 123373852 123374379 + 1.55864784258971 NA intron (NM_001359076, intron 1 of 16) CpG 404 NM_001286363 66855 Mm.178818 NM_025804 ENSMUSG00000001472 Tcf25 1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding common_peak1_135_78_0.49194015001286_6.54975082318353_1.55864784258971 chr11 59505243 59506658 + 1.55864784258971 NA non-coding (NR_135273, exon 1 of 4) non-coding (NR_135273, exon 1 of 4) 297 NR_015585 74476 Mm.440257 NR_015585 ENSMUSG00000072893 4933439C10Rik 2610028M21Rik RIKEN cDNA 4933439C10 gene ncRNA common_peak2_82_99_-0.555532568883806_6.36608990533282_1.55787891908392 chr16 94525952 94527315 + 1.55787891908392 NA promoter-TSS (NM_007834) promoter-TSS (NM_007834) -4 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding common_peak1_50_67_-0.696796381686433_5.73906465040712_1.55729322517715 chr17 79744613 79745273 + 1.55729322517715 NA Intergenic Intergenic -29902 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_50_67_-0.696796381686433_5.73906465040712_1.55729322517715-2 chr17 80808580 80809650 + 1.55729322517715 NA Intergenic Intergenic -81090 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_50_67_-0.696796381686433_5.73906465040712_1.55729322517715 chr1 179803189 179803712 + 1.55729322517715 NA 5' UTR (NM_026375, exon 1 of 36) 5' UTR (NM_026375, exon 1 of 36) 565 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak1_127_73_0.499421739869113_6.45916423556351_1.55705400400628 chr15 74701124 74702906 + 1.55705400400628 NA TTS (NM_008415) TTS (NM_008415) -7146 NR_033197 66769 Mm.482908 NM_025756 ENSMUSG00000044276 4933427E11Rik - RIKEN cDNA 4933427E11 gene ncRNA common_peak2_93_50_0.594180981757315_5.96951583285015_1.55705293866515 chr2 102872011 102873269 + 1.55705293866515 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 29025 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_60_77_-0.638246149559373_5.96627914408256_1.55705293866514 chr8 126665813 126666312 + 1.55705293866514 NA Intergenic Intergenic -72626 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_170_182_-0.391920158857229_7.31973975885543_1.55559305044079 chr8 106168261 106169644 + 1.55559305044079 NA promoter-TSS (NM_001357382) promoter-TSS (NM_001357382) 31 NM_001357381 330836 Mm.46749 NM_178798 ENSMUSG00000031904 Slc7a6 AI643885|LAT-2|LAT3|y+LAT-2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 protein-coding unique_peak2_20_34_-1.00969334135234_4.6244363462688_1.55539563639961 chr7 132373105 132373713 + 1.55539563639961 NA Intergenic Intergenic -56181 NM_029935 77590 Mm.213582 NM_029935 ENSMUSG00000030930 Chst15 4631426J05Rik|BRAG|GalNAc4S-6ST|GalNAcS-6ST|MAd5|mKIAA0598 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein-coding common_peak2_20_34_-1.00969334135234_4.6244363462688_1.55539563639961-3 chrX 166661306 166661806 + 1.55539563639961 NA promoter-TSS (NR_046015) promoter-TSS (NR_046015) -469 NR_046015 382255 Mm.336320 NR_046015 ENSMUSG00000086860 Gm1720 - predicted gene 1720 ncRNA unique_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961-2 chr8 36724234 36724632 + 1.55539563639961 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 8621 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961-4 chr9 58453595 58454031 + 1.55539563639961 NA Intergenic Intergenic -1360 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak2_20_34_-1.00969334135234_4.6244363462688_1.55539563639961 chr15 5244386 5244599 + 1.55539563639961 NA promoter-TSS (NM_008965) promoter-TSS (NM_008965) -305 NM_008965 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961-2 chr12 36381789 36382175 + 1.55539563639961 NA promoter-TSS (NM_001289503) promoter-TSS (NM_001289503) -165 NM_001289503 75847 Mm.261764 NM_178629 ENSMUSG00000043153 Ispd 4930579E17Rik|AV040780 isoprenoid synthase domain containing protein-coding unique_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961 chr1 189214553 189215144 + 1.55539563639961 NA intron (NM_001357119, intron 5 of 5) intron (NM_001357119, intron 5 of 5) 128505 NM_001159850 16526 Mm.33304 NM_010607 ENSMUSG00000037624 Kcnk2 A430027H14Rik|AI848635|TREK-1 potassium channel, subfamily K, member 2 protein-coding common_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961 chr10 56486037 56486455 + 1.55539563639961 NA Intergenic Intergenic 54265 NR_152768 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA common_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961-3 chr8 104385947 104386433 + 1.55539563639961 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 9617 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak2_20_34_-1.00969334135234_4.6244363462688_1.55539563639961-2 chr8 25088313 25088694 + 1.55539563639961 NA 5' UTR (NM_031257, exon 2 of 12) 5' UTR (NM_031257, exon 2 of 12) 13308 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak2_19_34_-1.07958607397329_4.58948997995832_1.55539563639961-3 chr9 63108790 63109139 + 1.55539563639961 NA Intergenic Intergenic 38016 NM_172446 207667 Mm.36349 NM_172446 ENSMUSG00000022245 Skor1 AV273001|C230094B15Rik|Corl1|Lbxcor1 SKI family transcriptional corepressor 1 protein-coding common_peak1_20_34_-1.00969334135234_4.6244363462688_1.55539563639961 chr6 4600936 4601280 + 1.55539563639961 NA promoter-TSS (NM_145398) promoter-TSS (NM_145398) 42 NM_145398 213819 Mm.270703 NM_145398 ENSMUSG00000015189 Casd1 Cas1|Cast1|SOAT CAS1 domain containing 1 protein-coding common_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-2 chr16 24734333 24734781 + 1.5553956363996 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 12702 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-2 chr15 97914076 97914448 + 1.5553956363996 NA Intergenic Intergenic -5966 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding unique_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996 chr15 73163212 73163743 + 1.5553956363996 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 21470 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding unique_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-4 chr3 68534978 68535556 + 1.5553956363996 NA intron (NM_001113421, intron 2 of 7) intron (NM_001113421, intron 2 of 7) -37101 NM_013928 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996 chr14 62332195 62332684 + 1.5553956363996 NA intron (NM_026001, intron 1 of 10) intron (NM_026001, intron 1 of 10) 371 NM_026001 67153 Mm.26040 NM_026001 ENSMUSG00000021932 Rnaseh2b 1110019N06Rik|2610207P08Rik|Dleu8 ribonuclease H2, subunit B protein-coding common_peak2_40_17_0.90808954573137_4.623969774308_1.5553956363996 chr8 84066089 84066330 + 1.5553956363996 NA promoter-TSS (NM_009055) promoter-TSS (NM_009055) -627 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding unique_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-6 chr5 65698136 65698709 + 1.5553956363996 NA promoter-TSS (NM_001081321) promoter-TSS (NM_001081321) -566 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding unique_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-5 chr5 45856892 45857433 + 1.5553956363996 NA promoter-TSS (NM_172153) promoter-TSS (NM_172153) 378 NM_001359871 209707 Mm.71498 NM_172153 ENSMUSG00000015882 Lcorl Mlr1 ligand dependent nuclear receptor corepressor-like protein-coding unique_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-3 chr17 27039998 27040382 + 1.5553956363996 NA Intergenic PB1|SINE|Alu 10931 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak1_40_17_0.90808954573137_4.623969774308_1.5553956363996-3 chr18 12130272 12130718 + 1.5553956363996 NA intron (NM_024182, intron 1 of 12) intron (NM_024182, intron 1 of 12) 1645 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding common_peak2_87_46_0.617531571346178_5.86335463735073_1.55529262229468 chr11 105180664 105181265 + 1.55529262229468 NA promoter-TSS (NM_001294334) promoter-TSS (NM_001294334) 469 NR_027956 73431 Mm.351426 NM_028539 1700052K11Rik AI840954 RIKEN cDNA 1700052K11 gene ncRNA common_peak1_87_46_0.617531571346178_5.86335463735073_1.55529262229468 chr7 66576697 66577330 + 1.55529262229468 NA Intergenic Intergenic 112548 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_55_72_-0.665180444661337_5.85723433654935_1.55529262229468 chr17 69229785 69230320 + 1.55529262229468 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 47154 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA common_peak2_225_233_-0.347096997496398_7.69681622083521_1.5542122963043 chr15 25622574 25624660 + 1.5542122963043 NA intron (NM_019472, intron 1 of 40) intron (NM_019472, intron 1 of 40) 1067 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_408_273_0.274976212846246_8.23552018938365_1.55242213949521 chr15 79050128 79053036 + 1.55242213949521 NA Intergenic Intergenic 9697 NM_015738 14429 Mm.390805 NM_015738 ENSMUSG00000114755 Galr3 Galnr3 galanin receptor 3 protein-coding common_peak1_159_95_0.443569503530786_6.80674725248655_1.5515840017567 chr18 35831871 35833119 + 1.5515840017567 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 2181 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_71_88_-0.591077161866937_6.18019485003293_1.55153498638874-2 chr8 27023789 27024769 + 1.55153498638874 NA intron (NM_153592, intron 1 of 11) intron (NM_153592, intron 1 of 11) 480 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding common_peak2_71_88_-0.591077161866937_6.18019485003293_1.55153498638874 chr11 30953619 30955059 + 1.55153498638874 NA promoter-TSS (NM_025745) promoter-TSS (NM_025745) -59 NM_023906 65257 Mm.440539 NM_023906 ENSMUSG00000020305 Asb3 2400011J03Rik|Asb-3 ankyrin repeat and SOCS box-containing 3 protein-coding common_peak1_106_59_0.54527544142064_6.17952831631884_1.55153498638873 chr4 89458959 89459908 + 1.55153498638873 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -148401 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_107_59_0.558601275718396_6.18619123346772_1.55153498638873 chr11 80489000 80490334 + 1.55153498638873 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 12644 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding common_peak1_153_167_-0.418537950180816_7.18304844768835_1.5509453279157 chr9 63725673 63727081 + 1.5509453279157 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 31617 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_204_126_0.394876800008907_7.18612308677662_1.5509453279157 chr1 30948569 30949743 + 1.5509453279157 NA intron (NM_011200, intron 1 of 5) CpG 554 NR_002688 433406 Mm.389003 NR_002688 Gm13363 - predicted gene 13363 pseudo unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-26 chr2 166290687 166291182 + 1.55050753388977 NA intron (NR_033467, intron 2 of 2) intron (NR_033467, intron 2 of 2) 17026 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 - predicted gene 11468 ncRNA unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-44 chr9 122352595 122352969 + 1.55050753388977 NA intron (NM_001359207, intron 1 of 4) intron (NM_001359207, intron 1 of 4) 1166 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-7 chr12 112867038 112867417 + 1.55050753388977 NA Intergenic Intergenic -6311 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-22 chr19 32211291 32211482 + 1.55050753388977 NA promoter-TSS (NM_001168526) promoter-TSS (NM_001168526) -373 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-35 chr7 67740265 67740453 + 1.55050753388977 NA intron (NM_207663, intron 2 of 4) intron (NM_207663, intron 2 of 4) 19383 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-8 chr6 17281457 17281644 + 1.55050753388977 NA intron (NM_016900, intron 1 of 2) intron (NM_016900, intron 1 of 2) 365 NM_016900 12390 Mm.396075 NM_016900 ENSMUSG00000000058 Cav2 AI447843 caveolin 2 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-41 chr9 56502393 56502611 + 1.55050753388977 NA Intergenic Intergenic 83883 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-45 chrX 104487771 104488062 + 1.55050753388977 NA intron (NM_001081189, intron 1 of 6) intron (NM_001081189, intron 1 of 6) 5134 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-3 chr10 77545319 77545586 + 1.55050753388977 NA intron (NM_008404, intron 3 of 15) intron (NM_008404, intron 3 of 15) 15104 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-9 chr7 68062974 68063163 + 1.55050753388977 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 110811 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-23 chr2 4444441 4444814 + 1.55050753388977 NA intron (NM_001177843, intron 2 of 23) intron (NM_001177843, intron 2 of 23) 43651 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-18 chr17 36192010 36192228 + 1.55050753388977 NA Intergenic Intergenic -1968 NM_008208 15043 Mm.426002 NM_008208 ENSMUSG00000054128 H2-T3 H-2T3|H2-Tw3|MumuTL|TL histocompatibility 2, T region locus 3 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-9 chr13 40565194 40565730 + 1.55050753388977 NA Intergenic Intergenic -162346 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-3 chr16 16225410 16225719 + 1.55050753388977 NA intron (NM_026163, intron 2 of 12) intron (NM_026163, intron 2 of 12) 12219 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-28 chr4 130110627 130110939 + 1.55050753388977 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 3227 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-17 chr17 6141433 6141747 + 1.55050753388977 NA intron (NM_054040, intron 1 of 13) ORR1B1|LTR|ERVL-MaLR 3442 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977 chr11 20332964 20333203 + 1.55050753388977 NA promoter-TSS (NM_018861) promoter-TSS (NM_018861) -370 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-33 chr7 16296341 16296711 + 1.55050753388977 NA Intergenic Intergenic -9731 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-12 chr14 70106953 70107172 + 1.55050753388977 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 6969 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-31 chr6 82864735 82865111 + 1.55050753388977 NA Intergenic Intergenic 16930 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-38 chr8 83574526 83574980 + 1.55050753388977 NA intron (NM_134118, intron 1 of 12) intron (NM_134118, intron 1 of 12) 7995 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-43 chr9 120002364 120002690 + 1.55050753388977 NA Intergenic Intergenic -17785 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-6 chr2 160262374 160262855 + 1.55050753388977 NA Intergenic (TCTG)n|Simple_repeat|Simple_repeat 64880 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-6 chr12 104808268 104808497 + 1.55050753388977 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) -56430 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-7 chr4 34226053 34226385 + 1.55050753388977 NA Intergenic Intergenic -176152 NM_026293 67652 Mm.55848 NM_026293 ENSMUSG00000028264 Spaca1 1700124L11Rik|4930540L03Rik sperm acrosome associated 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-16 chr16 92625803 92626068 + 1.55050753388977 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 71394 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-40 chr8 108751077 108751425 + 1.55050753388977 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 36607 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-39 chr8 94377879 94378121 + 1.55050753388977 NA Intergenic Intergenic -8429 NM_001357205 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-15 chr15 85645812 85646045 + 1.55050753388977 NA Intergenic Intergenic -57845 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-2 chr10 60212826 60213078 + 1.55050753388977 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 6308 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-10 chr13 46842479 46842931 + 1.55050753388977 NA intron (NM_010617, intron 4 of 37) intron (NM_010617, intron 4 of 37) 87013 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-19 chr18 3280437 3280796 + 1.55050753388977 NA intron (NM_001311067, intron 1 of 3) intron (NM_001311067, intron 1 of 3) 516 NM_001311066 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-4 chr18 60727004 60727337 + 1.55050753388977 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 396 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-25 chr2 156475955 156476277 + 1.55050753388977 NA intron (NM_001006664, intron 1 of 21) intron (NM_001006664, intron 1 of 21) 582 NM_001006664 13821 Mm.20852 NM_013510 ENSMUSG00000027624 Epb41l1 4.1N|Epb4.1l1|NBL1|mKIAA0338 erythrocyte membrane protein band 4.1 like 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-8 chr13 3636684 3637171 + 1.55050753388977 NA intron (NM_001267724, intron 1 of 3) intron (NM_001267724, intron 1 of 3) 2895 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-29 chr5 115853271 115853659 + 1.55050753388977 NA intron (NM_007708, intron 2 of 46) intron (NM_007708, intron 2 of 46) 7809 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-36 chr8 31826984 31827366 + 1.55050753388977 NA intron (NM_178591, intron 4 of 8) intron (NM_178591, intron 4 of 8) 91028 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-5 chr2 26067984 26068414 + 1.55050753388977 NA intron (NM_001037098, intron 2 of 5) intron (NM_001037098, intron 2 of 5) 24197 NM_001037098 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-14 chr15 64531035 64531451 + 1.55050753388977 NA Intergenic Intergenic -148324 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-32 chr6 117202187 117202650 + 1.55050753388977 NA Intergenic Intergenic 33883 NM_021704 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-13 chr15 41740278 41740630 + 1.55050753388977 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -48541 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-30 chr5 146790834 146791532 + 1.55050753388977 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 3773 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-42 chr9 57537147 57537417 + 1.55050753388977 NA promoter-TSS (NM_001166364) promoter-TSS (NM_001166364) -246 NM_175273 78323 Mm.25814 NM_175273 ENSMUSG00000032305 Fam219b 2310046O06Rik|AI594866 family with sequence similarity 219, member B protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-4 chr11 80477140 80477397 + 1.55050753388977 NA 5' UTR (NM_009871, exon 1 of 1) 5' UTR (NM_009871, exon 1 of 1) 245 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-20 chr19 6968644 6968965 + 1.55050753388977 NA intron (NM_001290349, intron 1 of 30) intron (NM_001290349, intron 1 of 30) 1010 NM_008874 18797 Mm.273204 NM_008874 ENSMUSG00000024960 Plcb3 mKIAA4098 phospholipase C, beta 3 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-37 chr8 73289679 73289946 + 1.55050753388977 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 63728 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977 chr10 40063183 40063387 + 1.55050753388977 NA intron (NM_001114332, intron 3 of 5) intron (NM_001114332, intron 3 of 5) -38017 NM_144821 215929 Mm.55513 NM_144821 ENSMUSG00000038522 Mfsd4b1 AI317395|AI482555|Naglt1a major facilitator superfamily domain containing 4B1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-27 chr4 47036722 47037159 + 1.55050753388977 NA intron (NR_151464, intron 8 of 16) intron (NR_151464, intron 8 of 16) 20366 NR_151464 75691 Mm.86866 NM_001024136 ENSMUSG00000066191 Anks6 2210417J20Rik|Ankrd14|Gm635|SamCystin|Samd6|b2b1801.1Clo ankyrin repeat and sterile alpha motif domain containing 6 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-5 chr11 103056109 103056627 + 1.55050753388977 NA intron (NM_008707, intron 5 of 11) intron (NM_008707, intron 5 of 11) 24580 NM_001361706 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-21 chr19 7302995 7303285 + 1.55050753388977 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -7693 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-34 chr7 27356802 27357172 + 1.55050753388977 NA promoter-TSS (NM_138676) promoter-TSS (NM_138676) -979 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-11 chr13 109776613 109777058 + 1.55050753388977 NA intron (NM_011056, intron 7 of 16) intron (NM_011056, intron 7 of 16) -126974 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA unique_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-24 chr2 113817903 113818220 + 1.55050753388977 NA intron (NM_009162, intron 2 of 5) intron (NM_009162, intron 2 of 5) 11030 NM_009162 20394 Mm.4836 NM_009162 ENSMUSG00000023236 Scg5 7B2|AI325031|Sgne-1|Sgne1 secretogranin V protein-coding common_peak1_22_7_1.2499082813695_3.62495414068475_1.55050753388977-2 chr14 36918296 36918638 + 1.55050753388977 NA exon (NM_001347503, exon 2 of 8) exon (NM_001347503, exon 2 of 8) 1068 NM_001347503 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-8 chr18 69705041 69705375 + 1.55050753388976 NA Intergenic Intergenic -220351 NM_201362 381175 Mm.266831 NM_201362 ENSMUSG00000038903 Ccdc68 BC046343 coiled-coil domain containing 68 protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-10 chr6 128029241 128029615 + 1.55050753388976 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 114150 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-12 chr4 105705208 105705514 + 1.55050753388976 NA Intergenic Intergenic -535852 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-4 chr10 71363249 71363483 + 1.55050753388976 NA intron (NM_027184, intron 1 of 5) intron (NM_027184, intron 1 of 5) 15603 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-8 chr5 108066417 108066674 + 1.55050753388976 NA intron (NM_001253880, intron 1 of 12) intron (NM_001253880, intron 1 of 12) 871 NR_152817 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding common_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976 chr12 9112816 9113103 + 1.55050753388976 NA Intergenic Intergenic 82962 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding common_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-2 chr4 58183418 58183751 + 1.55050753388976 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 23012 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-14 chr9 64457510 64457812 + 1.55050753388976 NA intron (NM_001134399, intron 1 of 24) intron (NM_001134399, intron 1 of 24) 72035 NM_001134399 214058 Mm.127721 NM_172522 ENSMUSG00000036466 Megf11 2410080H04Rik|D130061K05 multiple EGF-like-domains 11 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-7 chr17 63800718 63801195 + 1.55050753388976 NA Intergenic Intergenic -63025 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-6 chr16 24443896 24444109 + 1.55050753388976 NA intron (NM_178665, intron 2 of 12) intron (NM_178665, intron 2 of 12) -4089 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-6 chr17 49476573 49477111 + 1.55050753388976 NA intron (NM_001008231, intron 14 of 25) intron (NM_001008231, intron 14 of 25) 48478 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-3 chr7 74278787 74279030 + 1.55050753388976 NA intron (NM_001038643, intron 10 of 10) intron (NM_001038643, intron 10 of 10) -265226 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976 chr1 59913012 59913229 + 1.55050753388976 NA 5' UTR (NM_001037725, exon 1 of 8) 5' UTR (NM_001037725, exon 1 of 8) 114 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-12 chr8 25495376 25495621 + 1.55050753388976 NA Intergenic Intergenic -23261 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976 chr1 85896460 85896996 + 1.55050753388976 NA intron (NM_022417, intron 1 of 5) intron (NM_022417, intron 1 of 5) 2218 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-11 chr4 57300237 57300495 + 1.55050753388976 NA intron (NM_011207, intron 1 of 25) CpG 1471 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-11 chr7 127260274 127260490 + 1.55050753388976 NA intron (NM_023203, intron 1 of 2) intron (NM_023203, intron 1 of 2) 285 NM_023203 66422 Mm.29898 NM_023203 ENSMUSG00000042462 Dctpp1 2410015N17Rik|AI854235|RS21-C6 dCTP pyrophosphatase 1 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-15 chr7 112208579 112208918 + 1.55050753388976 NA Intergenic Intergenic -17088 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-4 chr16 49888722 49889181 + 1.55050753388976 NA intron (NM_010581, intron 4 of 9) intron (NM_010581, intron 4 of 9) 33297 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-10 chr3 119958751 119959001 + 1.55050753388976 NA Intergenic Intergenic -175488 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-3 chr10 19171486 19171719 + 1.55050753388976 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 4364 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-3 chr13 41804737 41805103 + 1.55050753388976 NA intron (NM_001145875, intron 4 of 6) intron (NM_001145875, intron 4 of 6) 42568 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-16 chr9 20975806 20976178 + 1.55050753388976 NA intron (NM_010333, intron 1 of 1) CpG 801 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976 chr1 71681956 71682419 + 1.55050753388976 NA Intergenic Intergenic 28852 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-5 chr17 25867980 25868368 + 1.55050753388976 NA intron (NM_026633, intron 2 of 4) intron (NM_026633, intron 2 of 4) 564 NM_026633 68241 Mm.328870 NM_026633 ENSMUSG00000025732 Mcrip2 9530058B02Rik|Fam195a MAPK regulated corepressor interacting protein 2 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-13 chr4 114338998 114339301 + 1.55050753388976 NA Intergenic Intergenic -67575 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-9 chr5 112275619 112275998 + 1.55050753388976 NA promoter-TSS (NM_001326590) promoter-TSS (NM_001326590) -883 NM_001326590 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-17 chr9 36726293 36726583 + 1.55050753388976 NA intron (NM_007691, intron 1 of 12) CpG 220 NM_007691 12649 Mm.16753 NM_007691 ENSMUSG00000032113 Chek1 C85740|Chk1|rad27 checkpoint kinase 1 protein-coding unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-13 chr9 55432578 55433063 + 1.55050753388976 NA intron (NM_172923, intron 9 of 10) intron (NM_172923, intron 9 of 10) 79423 NM_145615 110842 Mm.290853 NM_145615 ENSMUSG00000032314 Etfa 2010200I21Rik|D9Ertd394e electron transferring flavoprotein, alpha polypeptide protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-14 chr5 77389334 77389615 + 1.55050753388976 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 18571 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-9 chr19 21104871 21105180 + 1.55050753388976 NA non-coding (NR_126458, exon 2 of 2) non-coding (NR_126458, exon 2 of 2) 315 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-7 chr3 41228205 41228559 + 1.55050753388976 NA Intergenic Intergenic -145336 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-18 chr9 41188328 41188740 + 1.55050753388976 NA Intergenic Intergenic -17621 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-5 chr15 6081090 6081413 + 1.55050753388976 NA Intergenic Intergenic -36547 NR_155429 105245876 Mm.128197 NR_155428 Gm41259 - predicted gene, 41259 ncRNA unique_peak2_8_19_-1.41610688706817_3.61387465135328_1.55050753388976-2 chr11 113733706 113734005 + 1.55050753388976 NA intron (NM_001163346, intron 1 of 1) intron (NM_001163346, intron 1 of 1) 17305 NM_020006 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding unique_peak2_7_19_-1.58483307109632_3.5295115593392_1.55050753388976-2 chr1 150177020 150177415 + 1.55050753388976 NA Intergenic Intergenic -12269 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA common_peak2_177_107_0.426364744663215_6.96806987449508_1.55007716242683 chr10 4387270 4388638 + 1.55007716242683 NA promoter-TSS (NM_001359811) promoter-TSS (NM_001359811) 154 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak2_122_138_-0.467145902895615_6.8853681212757_1.54987330816803 chr15 59826522 59827788 + 1.54987330816803 NA Intergenic Intergenic -32196 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_41_58_-0.770108353342462_5.49758887269061_1.54911055580826-3 chr19 24999148 24999874 + 1.54911055580826 NA promoter-TSS (NM_028785) promoter-TSS (NM_028785) -18 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_41_58_-0.770108353342462_5.49758887269061_1.54911055580826-2 chr18 37879447 37880285 + 1.54911055580826 NA intron (NM_007858, intron 16 of 26) intron (NM_007858, intron 16 of 26) -25206 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA common_peak2_41_58_-0.770108353342462_5.49758887269061_1.54911055580826 chr15 27937800 27938496 + 1.54911055580826 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 87700 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_70_35_0.694695740264419_5.51727287157452_1.54911055580825 chr11 121652228 121652939 + 1.54911055580825 NA intron (NM_178664, intron 3 of 12) intron (NM_178664, intron 3 of 12) 20568 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak1_70_35_0.694695740264419_5.51727287157452_1.54911055580825-2 chr6 91193250 91193830 + 1.54911055580825 NA Intergenic Intergenic -19224 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_70_35_0.694695740264419_5.51727287157452_1.54911055580825-2 chr18 67391560 67392158 + 1.54911055580825 NA intron (NM_026473, intron 2 of 3) intron (NM_026473, intron 2 of 3) 1128 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding common_peak1_70_35_0.694695740264419_5.51727287157452_1.54911055580825-3 chr8 70522648 70523041 + 1.54911055580825 NA intron (NM_029366, intron 1 of 4) CpG 336 NM_029366 75620 Mm.482129 NM_029366 ENSMUSG00000055553 Kxd1 0610030B01Rik|2810422J05Rik|C78305 KxDL motif containing 1 protein-coding common_peak1_70_35_0.694695740264419_5.51727287157452_1.54911055580825 chr4 57955690 57956264 + 1.54911055580825 NA intron (NM_011660, intron 1 of 4) CpG 434 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak1_234_147_0.369754877280494_7.3943308042692_1.54834518854012 chr7 142372422 142374582 + 1.54834518854012 NA intron (NM_001347541, intron 1 of 2) intron (NM_001347541, intron 1 of 2) 244 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_146_160_-0.423778112094352_7.11902782206744_1.5461267564202 chr1 16618407 16619834 + 1.5461267564202 NA intron (NM_001271016, intron 1 of 6) CpG 218 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak2_195_120_0.400384946944971_7.11905571074708_1.5461267564202 chr11 50291136 50292386 + 1.5461267564202 NA exon (NM_175334, exon 1 of 5) exon (NM_175334, exon 1 of 5) 575 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding common_peak2_96_112_-0.50856840800411_6.56589475841313_1.54534477417358 chr19 45997889 45998783 + 1.54534477417358 NA non-coding (NR_152221, exon 1 of 2) non-coding (NR_152221, exon 1 of 2) 152 NM_198296 71617 Mm.210949 NM_198296 ENSMUSG00000039901 9130011E15Rik AI431055|AW050122 RIKEN cDNA 9130011E15 gene protein-coding common_peak2_152_90_0.456652442019421_6.73612086120841_1.54378765711118 chr17 87796780 87797983 + 1.54378765711118 NA exon (NM_199251, exon 1 of 2) exon (NM_199251, exon 1 of 2) 613 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak1_100_55_0.56214297719981_6.08842641065751_1.54328506332033 chr2 30827050 30828272 + 1.54328506332033 NA intron (NM_133346, intron 1 of 5) intron (NM_133346, intron 1 of 5) 639 NM_133346 72323 Mm.27656 NM_133346 ENSMUSG00000039483 Asb6 2510004M11Rik|AA409356 ankyrin repeat and SOCS box-containing 6 protein-coding common_peak2_101_55_0.576256557933058_6.09548320102413_1.54328506332033 chr3 87525358 87526116 + 1.54328506332033 NA 5' UTR (NM_001286844, exon 1 of 5) 5' UTR (NM_001286844, exon 1 of 5) 159 NM_001359750 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak1_89_106_-0.537153818547807_6.47289007712724_1.54294727474337 chr9 115309245 115310366 + 1.54294727474337 NA exon (NM_024222, exon 1 of 16) exon (NM_024222, exon 1 of 16) 616 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding common_peak1_121_69_0.510818072784666_6.3846920533373_1.54283344403661 chr2 153161321 153162315 + 1.54283344403661 NA intron (NM_133847, intron 1 of 17) intron (NM_133847, intron 1 of 17) 517 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak2_161_96_0.446414631367242_6.82312015787075_1.54052118191889 chr14 75834418 75835672 + 1.54052118191889 NA Intergenic Intergenic 9919 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak1_116_132_-0.475128036164412_6.81771841741898_1.54052118191889 chr2 173263946 173264787 + 1.54052118191889 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 12167 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_249_254_-0.326507635099159_7.83109961930928_1.53949430002823 chr7 112203186 112205298 + 1.53949430002823 NA Intergenic Intergenic -21594 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_169_102_0.428877269760624_6.90093916206353_1.53942644517494 chr19 38037696 38039075 + 1.53942644517494 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 5192 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_169_102_0.428877269760624_6.90093916206353_1.53942644517494 chr12 112588770 112589905 + 1.53942644517494 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 553 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_76_39_0.658906357283827_5.65138127352928_1.53884632328361-2 chr15 94543634 94544109 + 1.53884632328361 NA promoter-TSS (NM_172437) promoter-TSS (NM_172437) 211 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding common_peak1_76_39_0.658906357283827_5.65138127352928_1.53884632328361 chr11 104624987 104625862 + 1.53884632328361 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 17424 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak2_46_63_-0.726338696697946_5.63683065165103_1.53884632328361-2 chr2 108623244 108623878 + 1.53884632328361 NA Intergenic Intergenic 654729 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding common_peak2_46_63_-0.726338696697946_5.63683065165103_1.53884632328361 chr17 69227805 69228370 + 1.53884632328361 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 49119 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA common_peak1_46_63_-0.726338696697946_5.63683065165103_1.53884632328361 chr13 100103458 100104020 + 1.53884632328361 NA exon (NM_001081061, exon 1 of 39) exon (NM_001081061, exon 1 of 39) 331 NM_001081061 544971 Mm.288546 NM_001081061 ENSMUSG00000049658 Bdp1 AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB protein-coding common_peak1_145_85_0.471095701290585_6.66181260534739_1.53729204765887 chr19 6975308 6976735 + 1.53729204765887 NA intron (NM_008889, intron 1 of 3) intron (NM_008889, intron 1 of 3) 973 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak2_61_78_-0.633331208624321_5.98711514386494_1.53728479856666 chr7 44985856 44986420 + 1.53728479856666 NA promoter-TSS (NR_045266) promoter-TSS (NR_045266) 282 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding common_peak2_38_54_-0.774985936842091_5.39386674510361_1.53680515249685-5 chr7 27232143 27232857 + 1.53680515249685 NA promoter-TSS (NM_133770) promoter-TSS (NM_133770) -513 NM_133770 76889 Mm.124728 NM_133770 ENSMUSG00000003762 Coq8b 0610012P18Rik|Adck4 coenzyme Q8B protein-coding common_peak1_65_32_0.715616885466061_5.40220256209148_1.53680515249685-2 chr14 73552651 73553676 + 1.53680515249685 NA intron (NM_001361638, intron 1 of 9) CpG 377 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding common_peak1_65_32_0.715616885466061_5.40220256209148_1.53680515249685-3 chr19 12488165 12489116 + 1.53680515249685 NA intron (NM_172442, intron 2 of 8) intron (NM_172442, intron 2 of 8) 13356 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding common_peak2_38_54_-0.774985936842091_5.39386674510361_1.53680515249685-2 chr10 95940778 95941377 + 1.53680515249685 NA intron (NM_001001932, intron 1 of 28) CpG 414 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_38_54_-0.774985936842091_5.39386674510361_1.53680515249685-3 chr15 71849830 71850517 + 1.53680515249685 NA intron (NM_027174, intron 46 of 63) intron (NM_027174, intron 46 of 63) -122335 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak2_38_54_-0.774985936842091_5.39386674510361_1.53680515249685-4 chr6 84010853 84011508 + 1.53680515249685 NA intron (NM_001077694, intron 1 of 54) intron (NM_001077694, intron 1 of 54) 2582 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak1_65_32_0.715616885466061_5.40220256209148_1.53680515249685 chr11 97041541 97042106 + 1.53680515249685 NA promoter-TSS (NM_027026) promoter-TSS (NM_027026) 263 NM_001357808 107732 Mm.208946 NM_026154 ENSMUSG00000001445 Mrpl10 0610040E02Rik|C78440|MRP-L8|Rpml8 mitochondrial ribosomal protein L10 protein-coding common_peak2_38_54_-0.774985936842091_5.39386674510361_1.53680515249685 chr1 88533545 88534194 + 1.53680515249685 NA Intergenic Intergenic -17648 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak2_65_32_0.715616885466061_5.40220256209148_1.53680515249685 chr15 83408798 83409199 + 1.53680515249685 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 23852 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_414_277_0.274929487774802_8.25640581661091_1.53603969173593 chr15 99331919 99335011 + 1.53603969173593 NA intron (NM_001310622, intron 4 of 25) intron (NM_001310622, intron 4 of 25) 30181 NM_001348256 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak1_337_221_0.305455499622592_7.9471436161614_1.53565107441392 chr3 145702986 145705267 + 1.53565107441392 NA Intergenic Intergenic -54141 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_361_239_0.291249014876365_8.0525151030467_1.53562874118228 chr4 88948038 88952151 + 1.53562874118228 NA Intergenic Intergenic -8052 NR_132735 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak2_293_294_-0.304487357802184_8.05232746534811_1.53562874118228 chr11 86651101 86654545 + 1.53562874118228 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 18452 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-3 chr3 89861021 89861762 + 1.53513093355237 NA Intergenic Intergenic 30021 NM_172530 214547 Mm.225 NM_172530 ENSMUSG00000046280 She 9430022A14 src homology 2 domain-containing transforming protein E protein-coding common_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237 chr1 177558988 177559425 + 1.53513093355237 NA Intergenic Intergenic 83737 NR_037994 75589 Mm.86666 NR_037994 ENSMUSG00000101746 2310043L19Rik - RIKEN cDNA 2310043L19 gene ncRNA common_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-4 chr6 99520620 99521171 + 1.53513093355237 NA promoter-TSS (NM_001347345) promoter-TSS (NM_001347345) 98 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-2 chr12 81484773 81485183 + 1.53513093355237 NA promoter-TSS (NR_132134) promoter-TSS (NR_132134) -127 NR_132134 66272 Mm.439970 NM_025461 ENSMUSG00000091803 Cox16 1810020G14Rik|1810055I05Rik|BB388670 cytochrome c oxidase assembly protein 16 protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-10 chr9 13632907 13633696 + 1.53513093355237 NA intron (NM_001013813, intron 1 of 3) intron (NM_001013813, intron 1 of 3) 13312 NM_001013813 270118 Mm.116898 NM_173776 ENSMUSG00000031925 Maml2 5930431H10|BC032967 mastermind like transcriptional coactivator 2 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-7 chr18 75488660 75489221 + 1.53513093355237 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -25705 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237 chr1 162240284 162240997 + 1.53513093355237 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 17272 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-4 chr13 45940372 45940911 + 1.53513093355237 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 24350 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237-5 chr8 70754391 70755051 + 1.53513093355237 NA promoter-TSS (NM_009001) promoter-TSS (NM_009001) 42 NM_001166399 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237 chr12 108453810 108454355 + 1.53513093355237 NA intron (NM_001043335, intron 1 of 21) X3_LINE|LINE|RTE-BovB 31266 NM_001043335 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-3 chr11 117969487 117969963 + 1.53513093355237 NA promoter-TSS (NM_007707) promoter-TSS (NM_007707) -359 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-3 chr5 112321089 112321373 + 1.53513093355237 NA Intergenic Intergenic -5138 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding unique_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237-3 chr5 4496286 4496522 + 1.53513093355237 NA Intergenic Intergenic 261812 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding common_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-2 chr4 57558447 57558816 + 1.53513093355237 NA Intergenic Intergenic -9617 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-9 chr8 47985685 47986390 + 1.53513093355237 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 4514 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-6 chr2 92459469 92459715 + 1.53513093355237 NA 5' UTR (NM_211358, exon 1 of 2) 5' UTR (NM_211358, exon 1 of 2) 202 NM_211358 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-10 chr8 70140324 70140803 + 1.53513093355237 NA intron (NM_001309841, intron 1 of 5) intron (NM_001309841, intron 1 of 5) 286 NM_001309841 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-3 chr14 118937220 118937663 + 1.53513093355237 NA promoter-TSS (NM_008929) promoter-TSS (NM_008929) -491 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-2 chr11 113269334 113269914 + 1.53513093355237 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -59955 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-6 chr16 85138095 85138780 + 1.53513093355237 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 35270 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-8 chr4 119105240 119105794 + 1.53513093355237 NA Intergenic Intergenic -3228 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-5 chr16 36041290 36041863 + 1.53513093355237 NA exon (NM_027113, exon 1 of 1) exon (NM_027113, exon 1 of 1) 386 NM_027113 69544 Mm.37802 NM_027113 ENSMUSG00000034379 Wdr5b 2310009C03Rik|AI606931 WD repeat domain 5B protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-5 chr18 35190455 35191209 + 1.53513093355237 NA intron (NM_009818, intron 7 of 17) intron (NM_009818, intron 7 of 17) 24192 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-4 chr9 41480556 41480906 + 1.53513093355237 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 5838 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237 chr11 74572408 74572748 + 1.53513093355237 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 17580 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-2 chr11 76148598 76149237 + 1.53513093355237 NA intron (NM_026664, intron 4 of 21) intron (NM_026664, intron 4 of 21) 30713 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-5 chr7 83718076 83718306 + 1.53513093355237 NA intron (NM_001360088, intron 2 of 18) intron (NM_001360088, intron 2 of 18) 14207 NM_001360087 16170 Mm.10137 NM_010551 ENSMUSG00000001741 Il16 mKIAA4048 interleukin 16 protein-coding common_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237-2 chr7 109561257 109561931 + 1.53513093355237 NA intron (NM_001001326, intron 2 of 19) intron (NM_001001326, intron 2 of 19) 41462 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak1_17_31_-1.10123377175405_4.44938311412297_1.53513093355237-2 chr8 67279055 67279339 + 1.53513093355237 NA Intergenic Intergenic -211561 NM_008673 17960 Mm.14125 NM_008673 ENSMUSG00000025588 Nat1 Nat-1 N-acetyl transferase 1 protein-coding unique_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237-2 chr2 95838978 95839489 + 1.53513093355237 NA Intergenic Intergenic -478936 NM_001289742 241568 Mm.241682 NM_178725 ENSMUSG00000050587 Lrrc4c 6430556C10Rik|NGL-1 leucine rich repeat containing 4C protein-coding common_peak2_37_15_0.969163454545147_4.48458172727257_1.53513093355237 chr11 55428552 55428802 + 1.53513093355237 NA Intergenic Intergenic -8597 NM_001290817 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-8 chr6 34498549 34499024 + 1.53513093355237 NA intron (NM_007563, intron 2 of 2) intron (NM_007563, intron 2 of 2) 22430 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak2_36_15_0.930960741057442_4.46548037052872_1.53513093355237 chr7 130655163 130655452 + 1.53513093355237 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -37249 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237 chr1 134362159 134362768 + 1.53513093355237 NA promoter-TSS (NM_020588) promoter-TSS (NM_020588) -457 NR_151737 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding unique_peak1_36_15_0.930960741057442_4.46548037052872_1.53513093355237-7 chr3 122586696 122587248 + 1.53513093355237 NA intron (NM_001114665, intron 2 of 15) intron (NM_001114665, intron 2 of 15) 32742 NM_153118 214459 Mm.209491 NM_153118 ENSMUSG00000039735 Fnbp1l 2610318I01Rik|AW548221|TOCA1|toca-1 formin binding protein 1-like protein-coding common_peak1_17_31_-1.10123377175405_4.44938311412297_1.53513093355237 chr11 16559250 16559595 + 1.53513093355237 NA Intergenic Intergenic -50938 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-4 chr15 99344145 99344593 + 1.53513093355237 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 26113 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding unique_peak1_37_15_0.969163454545147_4.48458172727257_1.53513093355237-9 chr5 35690580 35691137 + 1.53513093355237 NA Intergenic Intergenic -11078 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding unique_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237-4 chr6 135069463 135069854 + 1.53513093355237 NA intron (NM_181444, intron 1 of 3) intron (NM_181444, intron 1 of 3) 3996 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding unique_peak2_17_31_-1.10123377175405_4.44938311412297_1.53513093355237 chr11 32561673 32562223 + 1.53513093355237 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 28682 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_108_60_0.547957547565559_6.20471611134567_1.5345309705842 chr4 134534278 134535326 + 1.5345309705842 NA intron (NM_001355188, intron 1 of 7) CpG-10472 294 NM_001355188 76824 Mm.30153 NM_029759 ENSMUSG00000046671 Mtfr1l 2410166I05Rik|AI480750|Fam54b mitochondrial fission regulator 1-like protein-coding common_peak2_45_20_0.850535879017494_4.81758536228751_1.53432270224294-2 chr5 76304447 76304730 + 1.53432270224294 NA promoter-TSS (NM_007715) promoter-TSS (NM_007715) -40 NM_007715 12753 Mm.3552 NM_007715 ENSMUSG00000029238 Clock 5330400M04Rik|KAT13D circadian locomotor output cycles kaput protein-coding common_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294-5 chr3 95133552 95133908 + 1.53432270224294 NA promoter-TSS (NM_153121) promoter-TSS (NM_153121) 282 NM_027013 69269 Mm.182944 NM_027013 ENSMUSG00000092607 Scnm1 3110001I17Rik|Scnm1-ps sodium channel modifier 1 protein-coding common_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294-4 chr3 57252974 57253527 + 1.53432270224294 NA Intergenic Intergenic 48738 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294-3 chr17 7946147 7946675 + 1.53432270224294 NA intron (NM_025789, intron 1 of 7) intron (NM_025789, intron 1 of 7) 797 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294-6 chr7 29238547 29238935 + 1.53432270224294 NA intron (NM_001357664, intron 1 of 7) intron (NM_001357664, intron 1 of 7) 284 NM_001357664 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding unique_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294 chr18 32315738 32316200 + 1.53432270224294 NA Intergenic Intergenic -61248 NM_001083334 30948 Mm.4383 NM_009668 ENSMUSG00000024381 Bin1 ALP-1|Amphl|BRAMP-2|SH3P9 bridging integrator 1 protein-coding common_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294-2 chr16 95769244 95769801 + 1.53432270224294 NA Intergenic Intergenic 67115 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_45_20_0.850535879017494_4.81758536228751_1.53432270224294 chr3 95133545 95133881 + 1.53432270224294 NA promoter-TSS (NM_153121) promoter-TSS (NM_153121) 299 NM_027013 69269 Mm.182944 NM_027013 ENSMUSG00000092607 Scnm1 3110001I17Rik|Scnm1-ps sodium channel modifier 1 protein-coding common_peak1_45_20_0.850535879017494_4.81758536228751_1.53432270224294 chr12 112577503 112577969 + 1.53432270224294 NA Intergenic Intergenic -11048 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak2_23_38_-0.974526572416999_4.79813893265375_1.53432270224293-2 chr8 82402024 82402431 + 1.53432270224293 NA intron (NM_001254747, intron 1 of 7) intron (NM_001254747, intron 1 of 7) 359 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding common_peak2_23_38_-0.974526572416999_4.79813893265375_1.53432270224293 chr18 77767256 77767727 + 1.53432270224293 NA intron (NM_001357531, intron 3 of 10) intron (NM_001357531, intron 3 of 10) 308 NM_146089 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak1_23_38_-0.974526572416999_4.79813893265375_1.53432270224293 chr9 21333327 21333618 + 1.53432270224293 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) -4356 NM_152808 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding unique_peak2_23_38_-0.974526572416999_4.79813893265375_1.53432270224293 chr4 89372422 89373055 + 1.53432270224293 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -61706 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_23_38_-0.974526572416999_4.79813893265375_1.53432270224293-3 chr9 24502462 24503147 + 1.53432270224293 NA intron (NM_001359948, intron 1 of 22) intron (NM_001359948, intron 1 of 22) 336 NM_001359948 244745 Mm.38526 NM_172920 ENSMUSG00000043067 Dpy19l1 1100001I19Rik|6030402K12|AI225861|AW558481 dpy-19-like 1 (C. elegans) protein-coding common_peak2_23_38_-0.974526572416999_4.79813893265375_1.53432270224293-2 chr5 115069867 115070284 + 1.53432270224293 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 37887 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding common_peak1_51_68_-0.6900412618963_5.76350382583002_1.53425852299322 chr16 24448112 24448772 + 1.53425852299322 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 351 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_82_43_0.628892002253621_5.77387761976411_1.53425852299321-2 chr9 70503068 70503813 + 1.53425852299321 NA promoter-TSS (NM_001357494) promoter-TSS (NM_001357494) -62 NM_001357494 93836 Mm.29783 NM_033604 ENSMUSG00000032217 Rnf111 ARK|Arkadia ring finger 111 protein-coding common_peak1_82_43_0.628892002253621_5.77387761976411_1.53425852299321 chr4 133598465 133599752 + 1.53425852299321 NA Intergenic Intergenic 3060 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_56_73_-0.659454308856349_5.87972621120078_1.53404806139876 chr13 21530412 21531064 + 1.53404806139876 NA intron (NM_001251834, intron 1 of 1) intron (NM_001251834, intron 1 of 1) 376 NM_139141 93681 Mm.290601 NM_139141 ENSMUSG00000063894 Zkscan8 2510038J07Rik|D430019P06Rik|LD5-1|Zfp192 zinc finger with KRAB and SCAN domains 8 protein-coding common_peak2_156_169_-0.407973625113295_7.20540412358105_1.53400245529233 chr19 32291642 32293326 + 1.53400245529233 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 56832 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_140_154_-0.428682479317972_7.06178316561525_1.5331781581079 chr17 26613064 26614907 + 1.5331781581079 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 52473 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_140_154_-0.428682479317972_7.06178316561525_1.5331781581079-2 chr19 5487766 5489047 + 1.5331781581079 NA promoter-TSS (NR_153768) promoter-TSS (NR_153768) -27 NR_153769 71711 Mm.27697 NM_027877 ENSMUSG00000024906 Mus81 1200008A18Rik|AI182501|AW045863 MUS81 structure-specific endonuclease subunit protein-coding common_peak2_165_177_-0.394464789648723_7.27850103614204_1.5324822019375 chr16 23317506 23318532 + 1.5324822019375 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 27549 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_97_113_-0.506586850371931_6.57959658897878_1.53232159329387 chr12 105784711 105785963 + 1.53232159329387 NA intron (NM_011112, intron 1 of 21) intron (NM_011112, intron 1 of 21) 640 NM_001347440 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding common_peak2_97_113_-0.506586850371931_6.57959658897878_1.53232159329387 chr11 69098972 69100297 + 1.53232159329387 NA promoter-TSS (NM_001159367) promoter-TSS (NM_001159367) -518 NM_001159367 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak2_97_113_-0.506586850371931_6.57959658897878_1.53232159329387-2 chr3 132870368 132871350 + 1.53232159329387 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 7737 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_132_147_-0.445685841082917_6.98661044508749_1.53041424931951 chr15 53346414 53347564 + 1.53041424931951 NA promoter-TSS (NM_010162) promoter-TSS (NM_010162) -806 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_78_95_-0.56739483444588_6.30126508349822_1.52974276117922 chr11 117780932 117781679 + 1.52974276117922 NA promoter-TSS (NM_001195089) promoter-TSS (NM_001195089) -613 NM_145439 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding common_peak1_115_65_0.523463922445568_6.30612608058124_1.5297427611792 chr3 53102186 53103138 + 1.5297427611792 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 61115 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_115_65_0.523463922445568_6.30612608058124_1.5297427611792 chr13 49317682 49318803 + 1.5297427611792 NA Intergenic Intergenic -9034 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_90_107_-0.53474525770747_6.48751487330973_1.52915555991989 chr11 120436714 120437871 + 1.52915555991989 NA intron (NM_199469, intron 1 of 15) CpG 408 NM_001195023 217365 Mm.309520 NM_199469 ENSMUSG00000039703 Nploc4 AK129375|Npl4|mKIAA1499 NPL4 homolog, ubiquitin recognition factor protein-coding common_peak1_198_122_0.398493847008712_7.1417614288436_1.52847188910131 chr3 151351992 151353983 + 1.52847188910131 NA Intergenic Intergenic -84895 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_84_101_-0.549992565454409_6.39742905924429_1.52814593019133 chr8 22685592 22686849 + 1.52814593019133 NA intron (NM_001159774, intron 5 of 21) intron (NM_001159774, intron 5 of 21) 20363 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding unique_peak1_60_29_0.740265473694357_5.2770233324557_1.52790159704429 chr10 77124603 77125432 + 1.52790159704429 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -11312 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_60_29_0.740265473694357_5.2770233324557_1.52790159704429-2 chr11 113074646 113075111 + 1.52790159704429 NA intron (NR_015556, intron 1 of 2) intron (NR_015556, intron 1 of 2) 126960 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_34_50_-0.821069349425692_5.26189066725865_1.52790159704429 chr16 57562998 57563645 + 1.52790159704429 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 14079 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak1_60_29_0.740265473694357_5.2770233324557_1.52790159704429-3 chr2 93333248 93334133 + 1.52790159704429 NA intron (NM_183180, intron 1 of 9) CpG 797 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding common_peak2_60_29_0.740265473694357_5.2770233324557_1.52790159704429 chr8 108886901 108887240 + 1.52790159704429 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -49790 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak1_208_129_0.388876020322713_7.21680582318981_1.52570265309952 chr15 102921241 102922943 + 1.52570265309952 NA intron (NM_010464, intron 1 of 1) CpG 961 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding common_peak2_67_84_-0.606615058374494_6.10608340695045_1.52529393521332 chr1 151227085 151227560 + 1.52529393521332 NA Intergenic Intergenic 89288 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak2_67_84_-0.606615058374494_6.10608340695045_1.52529393521332-2 chr15 62658999 62659890 + 1.52529393521332 NA Intergenic Intergenic -439993 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_102_56_0.564697350893486_6.11523868961148_1.52529393521332 chr3 102470162 102471228 + 1.52529393521332 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 776 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361-5 chr2 6256167 6256753 + 1.52482195715361 NA intron (NR_040333, intron 3 of 6) intron (NR_040333, intron 3 of 6) -43466 NM_024208 67856 Mm.38342 NM_024208 ENSMUSG00000039063 Echdc3 2310005D12Rik|AI662097 enoyl Coenzyme A hydratase domain containing 3 protein-coding common_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361-4 chr15 86067825 86068256 + 1.52482195715361 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 9313 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_27_42_-0.894565660910173_4.97898192424701_1.52482195715361 chr11 83472585 83472916 + 1.52482195715361 NA promoter-TSS (NM_027427) promoter-TSS (NM_027427) -358 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361 chr1 153092950 153093261 + 1.52482195715361 NA intron (NM_175460, intron 7 of 10) intron (NM_175460, intron 7 of 10) 93342 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_27_42_-0.894565660910173_4.97898192424701_1.52482195715361-2 chr2 84528610 84528985 + 1.52482195715361 NA Intergenic Intergenic -21924 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361-6 chr6 28480419 28480993 + 1.52482195715361 NA intron (NM_019776, intron 1 of 23) intron (NM_019776, intron 1 of 23) 358 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding unique_peak2_27_42_-0.894565660910173_4.97898192424701_1.52482195715361-2 chr13 62466595 62467107 + 1.52482195715361 NA promoter-TSS (NM_001136496) promoter-TSS (NM_001136496) -39 NM_001136496 71508 Mm.442497 NM_178875 ENSMUSG00000113450 Zfp935 8430426H19Rik|Es113 zinc finger protein 935 protein-coding common_peak2_50_23_0.80570395884275_4.98781448014253_1.52482195715361 chr6 122702840 122703185 + 1.52482195715361 NA Intergenic Intergenic -4477 NM_001289831 71950 Mm.6047 NM_028016 ENSMUSG00000012396 Nanog 2410002E02Rik|ENK|ecat4 Nanog homeobox protein-coding unique_peak2_27_42_-0.894565660910173_4.97898192424701_1.52482195715361 chr13 6548285 6548968 + 1.52482195715361 NA intron (NM_001360106, intron 1 of 26) intron (NM_001360106, intron 1 of 26) 469 NM_001360106 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361 chr1 74042079 74042770 + 1.52482195715361 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 82023 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361-3 chr12 86878726 86879347 + 1.52482195715361 NA Intergenic Intergenic 5778 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak2_27_42_-0.894565660910173_4.97898192424701_1.52482195715361-3 chr8 44987016 44987440 + 1.52482195715361 NA intron (NM_001081286, intron 1 of 25) intron (NM_001081286, intron 1 of 25) 37020 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_27_42_-0.894565660910173_4.97898192424701_1.52482195715361-3 chr2 131423001 131423555 + 1.52482195715361 NA Intergenic Intergenic -68584 NM_001177834 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_50_23_0.80570395884275_4.98781448014253_1.52482195715361-2 chr1 182528256 182528951 + 1.52482195715361 NA Intergenic Intergenic -10993 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_166_178_-0.393943405237712_7.2868440746454_1.5245910884973 chr11 69919911 69921272 + 1.5245910884973 NA promoter-TSS (NM_001166590) promoter-TSS (NM_001166590) 39 NM_001166590 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak2_30_46_-0.877084332551611_5.11604668540183_1.52341724501299-3 chr8 34287572 34287870 + 1.52341724501299 NA Intergenic Intergenic -121009 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak2_30_46_-0.877084332551611_5.11604668540183_1.52341724501299 chr10 86173713 86174371 + 1.52341724501299 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 78188 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_31_46_-0.831603787033086_5.13878695816109_1.52341724501299 chr2 60747989 60748538 + 1.52341724501299 NA Intergenic Intergenic -25660 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_30_46_-0.877084332551611_5.11604668540183_1.52341724501299-2 chr13 31558824 31559314 + 1.52341724501299 NA exon (NM_008239, exon 1 of 1) exon (NM_008239, exon 1 of 1) 899 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding unique_peak1_55_26_0.769756612055212_5.13976580819107_1.52341724501298 chr2 25144050 25144730 + 1.52341724501298 NA Intergenic Intergenic -36368 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_55_26_0.769756612055212_5.13976580819107_1.52341724501298 chr19 56995474 56996159 + 1.52341724501298 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 12759 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_55_26_0.769756612055212_5.13976580819107_1.52341724501298-2 chr6 113099878 113100631 + 1.52341724501298 NA intron (NM_028385, intron 1 of 21) intron (NM_028385, intron 1 of 21) -4681 NM_173005 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak2_55_26_0.769756612055212_5.13976580819107_1.52341724501298 chr15 98609433 98609848 + 1.52341724501298 NA Intergenic CpG -2007 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding common_peak2_43_59_-0.727715193011458_5.54303299910279_1.52229579581052-3 chr2 25546102 25546839 + 1.52229579581052 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 470 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding unique_peak2_43_59_-0.727715193011458_5.54303299910279_1.52229579581052 chr7 101347441 101348443 + 1.52229579581052 NA promoter-TSS (NM_001040111) promoter-TSS (NM_001040111) -127 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_43_59_-0.727715193011458_5.54303299910279_1.52229579581052 chr13 32498126 32498927 + 1.52229579581052 NA Intergenic Intergenic -159982 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_43_59_-0.727715193011458_5.54303299910279_1.52229579581052-2 chr13 98692860 98693637 + 1.52229579581052 NA intron (NM_001025606, intron 1 of 3) intron (NM_001025606, intron 1 of 3) 1583 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_43_59_-0.727715193011458_5.54303299910279_1.52229579581052-4 chr9 71803410 71804054 + 1.52229579581052 NA Intergenic Intergenic -32130 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak1_71_36_0.67520290347051_5.54705481736421_1.52229579581051-2 chr2 33886643 33887405 + 1.52229579581051 NA intron (NM_175184, intron 1 of 9) CpG 922 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding unique_peak1_71_36_0.67520290347051_5.54705481736421_1.52229579581051 chr18 80712438 80713654 + 1.52229579581051 NA promoter-TSS (NM_001164109) promoter-TSS (NM_001164109) 25 NM_001164109 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_71_36_0.67520290347051_5.54705481736421_1.52229579581051 chr10 75516751 75517198 + 1.52229579581051 NA intron (NM_001347201, intron 1 of 5) intron (NM_001347201, intron 1 of 5) 407 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak1_71_36_0.67520290347051_5.54705481736421_1.52229579581051-3 chr7 35646646 35647388 + 1.52229579581051 NA intron (NM_019746, intron 1 of 5) CpG 465 NM_019746 56330 Mm.371609 NM_019746 ENSMUSG00000030417 Pdcd5 2200003D22Rik|AA408513|Tfar19 programmed cell death 5 protein-coding common_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-4 chr2 71540559 71540878 + 1.52222891542741 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -2827 NR_002854 111970 Mm.4543 NR_002854 Dlx1as Dix1as|Dlx1os distal-less homeobox 1, antisense ncRNA unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-8 chr8 127963799 127964183 + 1.52222891542741 NA Intergenic Intergenic 314234 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-12 chr2 164834052 164834359 + 1.52222891542741 NA promoter-TSS (NM_001082974) promoter-TSS (NM_001082974) 432 NM_008906 19025 Mm.359633 NM_008906 ENSMUSG00000017760 Ctsa AU019505|PPCA|Ppgb cathepsin A protein-coding common_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741 chr15 11572582 11572797 + 1.52222891542741 NA Intergenic Intergenic -173031 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-5 chr4 64077473 64077670 + 1.52222891542741 NA Intergenic Intergenic -30556 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-6 chr13 34234197 34234495 + 1.52222891542741 NA intron (NM_001033167, intron 3 of 10) intron (NM_001033167, intron 3 of 10) 71382 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-9 chr2 13457545 13457988 + 1.52222891542741 NA intron (NM_001081084, intron 15 of 66) intron (NM_001081084, intron 15 of 66) 34110 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-23 chr9 101269799 101270070 + 1.52222891542741 NA Intergenic Intergenic -18102 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-14 chr3 150882365 150882698 + 1.52222891542741 NA Intergenic Intergenic 141331 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-3 chr11 69579813 69580183 + 1.52222891542741 NA promoter-TSS (NM_144824) promoter-TSS (NM_144824) -361 NM_011640 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-20 chr7 49159552 49159893 + 1.52222891542741 NA non-coding (NR_154465, exon 2 of 4) non-coding (NR_154465, exon 2 of 4) 2436 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741 chr15 100420607 100420848 + 1.52222891542741 NA intron (NM_008732, intron 1 of 16) intron (NM_008732, intron 1 of 16) 2328 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-5 chr17 62687846 62688313 + 1.52222891542741 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 193238 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-22 chr8 107187020 107187372 + 1.52222891542741 NA 3' UTR (NM_025558, exon 5 of 5) 3' UTR (NM_025558, exon 5 of 5) 36535 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-2 chr2 30067418 30067718 + 1.52222891542741 NA intron (NM_001204875, intron 1 of 7) intron (NM_001204875, intron 1 of 7) 1094 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-4 chr11 117354017 117354423 + 1.52222891542741 NA intron (NM_017380, intron 5 of 9) intron (NM_017380, intron 5 of 9) 21907 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-3 chr2 52624468 52624764 + 1.52222891542741 NA intron (NM_001037099, intron 2 of 13) intron (NM_001037099, intron 2 of 13) 51243 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-2 chr10 120112388 120112798 + 1.52222891542741 NA intron (NM_080446, intron 1 of 12) intron (NM_080446, intron 1 of 12) 372 NM_080446 117599 Mm.214703 NM_080446 ENSMUSG00000020228 Helb AI447783|D10Ertd664e helicase (DNA) B protein-coding unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-7 chr5 104383297 104383809 + 1.52222891542741 NA Intergenic Intergenic -51558 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-2 chr17 64330272 64330804 + 1.52222891542741 NA intron (NM_001025309, intron 1 of 9) intron (NM_001025309, intron 1 of 9) 1345 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-19 chr7 28957011 28957396 + 1.52222891542741 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 5129 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-13 chr3 144827591 144827962 + 1.52222891542741 NA intron (NM_139148, intron 10 of 13) intron (NM_139148, intron 10 of 13) -8282 NM_030601 80797 Mm.20897 NM_030601 ENSMUSG00000028262 Clca3a2 Clca2 chloride channel accessory 3A2 protein-coding unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-2 chr1 184053444 184053808 + 1.52222891542741 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 19245 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-16 chr4 109474967 109475274 + 1.52222891542741 NA intron (NM_013876, intron 1 of 2) L2b|LINE|L2 1385 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-7 chr15 31184897 31185153 + 1.52222891542741 NA Intergenic Intergenic -39360 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-24 chr9 122172743 122173228 + 1.52222891542741 NA Intergenic Intergenic 55526 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-15 chr4 81619491 81620051 + 1.52222891542741 NA Intergenic Intergenic -132758 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-4 chr15 78989594 78989934 + 1.52222891542741 NA intron (NM_001024716, intron 2 of 13) intron (NM_001024716, intron 2 of 13) 6708 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-11 chr2 128127639 128127907 + 1.52222891542741 NA exon (NM_001284410, exon 1 of 4) exon (NM_001284410, exon 1 of 4) 198 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-17 chr5 113268215 113268746 + 1.52222891542741 NA intron (NM_001309526, intron 7 of 12) intron (NM_001309526, intron 7 of 12) 12121 NM_001309528 52850 Mm.200203 NM_172718 ENSMUSG00000042216 Sgsm1 2410098H20Rik|AA408781|D5Bwg1524e|E130107M15|NuIP|Rutbc2 small G protein signaling modulator 1 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-5 chr12 104913696 104914006 + 1.52222891542741 NA Intergenic MIRb|SINE|MIR -48775 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-8 chr16 45888396 45888801 + 1.52222891542741 NA Intergenic ID4|SINE|ID -43847 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-10 chr2 127788421 127788930 + 1.52222891542741 NA intron (NM_001291012, intron 1 of 19) CpG 216 NM_016902 53885 Mm.210766 NM_016902 ENSMUSG00000027378 Nphp1 - nephronophthisis 1 (juvenile) homolog (human) protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-18 chr5 113591139 113591441 + 1.52222891542741 NA Intergenic Intergenic 40870 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-3 chr5 121835761 121836117 + 1.52222891542741 NA 5' UTR (NM_001306126, exon 1 of 9) 5' UTR (NM_001306126, exon 1 of 9) 165 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741 chr1 38129262 38129668 + 1.52222891542741 NA 5' UTR (NM_001359287, exon 1 of 24) 5' UTR (NM_001359287, exon 1 of 24) 201 NM_001359287 56210 Mm.389103 NM_019570 ENSMUSG00000026082 Rev1 1110027I23Rik|AU022044|Rev1l REV1, DNA directed polymerase protein-coding unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-6 chr5 33657506 33657800 + 1.52222891542741 NA promoter-TSS (NM_001310541) promoter-TSS (NM_001310541) 324 NM_001356983 68366 Mm.491151 NM_026698 ENSMUSG00000019295 Tmem129 0610039G24Rik|2410015J15Rik|AA409575 transmembrane protein 129 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-21 chr7 49886341 49886665 + 1.52222891542741 NA Intergenic Intergenic -23796 NM_001146013 104245 Mm.207053 NM_148931 ENSMUSG00000039728 Slc6a5 Glyt2|prestin solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741-25 chrX 96120644 96120839 + 1.52222891542741 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 24696 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak2_10_22_-1.33027659431346_3.85842365890028_1.52222891542741-3 chr10 81452168 81452628 + 1.52222891542741 NA Intergenic Intergenic 20733 NM_001311127 319586 Mm.152689 NM_176954 ENSMUSG00000034818 Celf5 4930565A21Rik|Brunol5 CUGBP, Elav-like family member 5 protein-coding unique_peak1_26_9_1.15767373558604_3.90076496268038_1.52222891542741 chr1 40385637 40386190 + 1.52222891542741 NA Intergenic Intergenic -43657 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_297_297_-0.299726103510139_8.06930546870709_1.52183723737403 chr8 120002213 120004281 + 1.52183723737403 NA intron (NM_001310635, intron 1 of 14) intron (NM_001310635, intron 1 of 14) 10809 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak1_112_127_-0.469677298339748_6.76516135083013_1.5208905732875 chr1 30872735 30873755 + 1.5208905732875 NA Intergenic CpG -9989 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak1_155_92_0.453105006428049_6.76571131432206_1.52089057328748 chr10 60819664 60821229 + 1.52089057328748 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 11135 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-6 chr7 113153236 113153676 + 1.52081014994907 NA Intergenic Intergenic -11441 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-2 chr18 24753966 24754573 + 1.52081014994907 NA exon (NM_175276, exon 2 of 27) exon (NM_175276, exon 2 of 27) 45646 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907 chr14 75863536 75863781 + 1.52081014994907 NA Intergenic PB1|SINE|Alu 15735 NR_028481 100303751 Mm.484707 NR_028481 ENSMUSG00000065147 Snora31 MBI-161 small nucleolar RNA, H/ACA box 31 snoRNA common_peak2_33_13_1.00247593527885_4.30859288969703_1.52081014994907-3 chr2 138256626 138256929 + 1.52081014994907 NA intron (NM_001025431, intron 1 of 4) CpG 193 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-5 chr6 94284214 94284657 + 1.52081014994907 NA promoter-TSS (NM_001286784) promoter-TSS (NM_001286784) -518 NM_001286785 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-7 chr9 72714493 72715069 + 1.52081014994907 NA intron (NM_010890, intron 9 of 28) intron (NM_010890, intron 9 of 28) 21483 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_33_13_1.00247593527885_4.30859288969703_1.52081014994907-4 chr7 89523431 89523760 + 1.52081014994907 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 3592 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-5 chr7 78913102 78913530 + 1.52081014994907 NA promoter-TSS (NM_001291220) promoter-TSS (NM_001291220) -108 NM_001291221 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding common_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-2 chr14 55478651 55479177 + 1.52081014994907 NA exon (NM_030686, exon 1 of 5) exon (NM_030686, exon 1 of 5) 156 NM_030686 28200 Mm.27427 NM_030686 ENSMUSG00000022210 Dhrs4 AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR dehydrogenase/reductase (SDR family) member 4 protein-coding common_peak1_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-2 chr18 61395185 61395548 + 1.52081014994907 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 2534 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA unique_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-6 chr8 73178808 73179176 + 1.52081014994907 NA intron (NM_001317391, intron 3 of 15) intron (NM_001317391, intron 3 of 15) 162480 NR_039551 100628574 NR_039551 ENSMUSG00000093140 Mir28b mmu-mir-28b microRNA 28b ncRNA unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-9 chr9 122180003 122180546 + 1.52081014994907 NA intron (NM_001271873, intron 12 of 12) intron (NM_001271873, intron 12 of 12) 62815 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_33_13_1.00247593527885_4.30859288969703_1.52081014994907 chr14 72709562 72709798 + 1.52081014994907 NA intron (NM_207636, intron 1 of 25) CpG 323 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-4 chr3 90081639 90082054 + 1.52081014994907 NA intron (NM_001357581, intron 1 of 8) intron (NM_001357581, intron 1 of 8) 2325 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-3 chr16 45377846 45378480 + 1.52081014994907 NA Intergenic Intergenic 30890 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-2 chr11 80183952 80184278 + 1.52081014994907 NA exon (NM_028019, exon 1 of 5) exon (NM_028019, exon 1 of 5) 243 NM_028019 71956 Mm.22985 NM_028019 ENSMUSG00000020707 Rnf135 0610037N03Rik|2410006N06Rik ring finger protein 135 protein-coding common_peak1_15_28_-1.12794095090978_4.29401051967268_1.52081014994907 chr15 6259845 6260191 + 1.52081014994907 NA Intergenic Intergenic -39771 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_33_13_1.00247593527885_4.30859288969703_1.52081014994907-2 chr18 75861745 75861973 + 1.52081014994907 NA intron (NM_145356, intron 1 of 4) intron (NM_145356, intron 1 of 4) 41681 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding unique_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907 chr13 24536224 24536762 + 1.52081014994907 NA Intergenic Intergenic -45696 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-6 chr6 70792407 70792892 + 1.52081014994907 NA promoter-TSS (NM_009075) promoter-TSS (NM_009075) -474 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-3 chr14 30716338 30716663 + 1.52081014994907 NA intron (NM_001166532, intron 1 of 20) CpG 885 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak1_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-4 chr7 99139539 99139839 + 1.52081014994907 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 1455 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-4 chr3 144643365 144643684 + 1.52081014994907 NA Intergenic Intergenic 73097 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-7 chr8 24518215 24518509 + 1.52081014994907 NA Intergenic Intergenic -33376 NR_035483 common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-4 chr16 15991218 15991618 + 1.52081014994907 NA intron (NM_001355731, intron 7 of 18) intron (NM_001355731, intron 7 of 18) 104132 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-2 chr15 11543087 11543564 + 1.52081014994907 NA Intergenic Intergenic -143667 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-8 chr8 72570825 72571062 + 1.52081014994907 NA promoter-TSS (NM_001357278) promoter-TSS (NM_001357278) 105 NM_172396 66818 Mm.22565 NM_172396 ENSMUSG00000044600 Smim7 9130011J15Rik small integral membrane protein 7 protein-coding unique_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-4 chr4 139967145 139967451 + 1.52081014994907 NA TTS (NR_035519) TTS (NR_035519) 322 NR_035519 100316727 NR_035519 ENSMUSG00000089294 Mir2139 mmu-mir-2139 microRNA 2139 ncRNA unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-3 chr2 135864156 135864579 + 1.52081014994907 NA intron (NM_001355156, intron 3 of 37) intron (NM_001355156, intron 3 of 37) 99529 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907-5 chr7 67960664 67961232 + 1.52081014994907 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 8691 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-5 chr18 61395200 61395552 + 1.52081014994907 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 2524 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak1_33_13_1.00247593527885_4.30859288969703_1.52081014994907 chr14 52279611 52279930 + 1.52081014994907 NA promoter-TSS (NM_172601) promoter-TSS (NM_172601) -375 NM_172601 76338 Mm.32870 NM_172601 ENSMUSG00000022159 Rab2b 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik RAB2B, member RAS oncogene family protein-coding common_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907 chr1 105990428 105990763 + 1.52081014994907 NA promoter-TSS (NR_151625) promoter-TSS (NR_151625) 189 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-3 chr6 91573742 91574033 + 1.52081014994907 NA Intergenic Intergenic 57852 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_15_28_-1.12794095090978_4.29401051967268_1.52081014994907-3 chr19 38035734 38036146 + 1.52081014994907 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 7637 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_150_163_-0.411954100361045_7.15157495443756_1.51983150554744 chr11 86651101 86652620 + 1.51983150554744 NA intron (NM_001356531, intron 5 of 11) B2_Mm2|SINE|B2 19415 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak2_98_114_-0.504643443892406_6.59316832899817_1.51956951597777 chr19 5841475 5842838 + 1.51956951597777 NA TTS (NR_003513) TTS (NR_003513) 3322 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_139_81_0.479694028781232_6.5973990190087_1.51956951597777 chr5 96804599 96805788 + 1.51956951597777 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 11808 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak2_98_114_-0.504643443892406_6.59316832899817_1.51956951597777-2 chr2 167491930 167493251 + 1.51956951597777 NA promoter-TSS (NM_030743) promoter-TSS (NM_030743) -55 NM_030743 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding common_peak1_139_81_0.479694028781232_6.5973990190087_1.51956951597777 chr5 96804625 96805896 + 1.51956951597777 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 11875 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak1_62_79_-0.628557796640528_6.0076491965671_1.51813377769487 chr13 16760302 16761409 + 1.51813377769487 NA Intergenic Intergenic -737432 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak1_96_52_0.583690099847879_6.01976550448714_1.51813377769486 chr12 112796415 112797605 + 1.51813377769486 NA Intergenic Intergenic -11965 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak1_96_52_0.583690099847879_6.01976550448714_1.51813377769486-2 chr2 153014445 153015356 + 1.51813377769486 NA intron (NM_178939, intron 1 of 4) intron (NM_178939, intron 1 of 4) 483 NM_178939 68559 Mm.12746 NM_178939 ENSMUSG00000027472 Pdrg1 1110004D19Rik|AU020945|AV006589|Pdrg p53 and DNA damage regulated 1 protein-coding common_peak1_95_52_0.568845232735564_6.01234307093098_1.51813377769486 chr1 118321852 118322512 + 1.51813377769486 NA intron (NM_026472, intron 1 of 6) intron (NM_026472, intron 1 of 6) 339 NM_026472 67949 Mm.280311 NM_026472 ENSMUSG00000026377 Nifk AI852665|C130020J04Rik|Mki67ip nucleolar protein interacting with the FHA domain of MKI67 protein-coding common_peak1_95_52_0.568845232735564_6.01234307093098_1.51813377769486-2 chr6 83032908 83033443 + 1.51813377769486 NA intron (NM_010070, intron 1 of 4) CpG-12178 296 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak1_223_230_-0.341214886343865_7.68114159824412_1.51813010090265 chr1 64616182 64617659 + 1.51813010090265 NA 5' UTR (NM_025964, exon 1 of 3) 5' UTR (NM_025964, exon 1 of 3) 248 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding common_peak2_73_90_-0.583888878714498_6.21585020084145_1.51798608485256 chr11 16507644 16508607 + 1.51798608485256 NA exon (NM_011343, exon 1 of 4) exon (NM_011343, exon 1 of 4) 359 NM_011343 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak1_73_90_-0.583888878714498_6.21585020084145_1.51798608485256 chr9 111404235 111404972 + 1.51798608485256 NA Intergenic Intergenic -34478 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak1_692_642_-0.200279229848336_9.22853531240378_1.51669779204667 chr15 77798143 77801374 + 1.51669779204667 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 42417 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_265_268_-0.314749817583835_7.91408745376471_1.51652790945169 chr8 111732304 111733900 + 1.51652790945169 NA promoter-TSS (NM_001198839) promoter-TSS (NM_001198839) -966 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_131_76_0.486169484556369_6.50987128297309_1.5156683700125 chr19 16367011 16367907 + 1.5156683700125 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -52455 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_92_108_-0.516899182996689_6.50973473327858_1.51566837001248 chr12 102284548 102285396 + 1.51566837001248 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 1331 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-13 chr5 124202925 124203559 + 1.51503956548638 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -16060 NM_001289472 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding common_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-5 chr6 70880486 70880958 + 1.51503956548638 NA intron (NM_010121, intron 4 of 16) intron (NM_010121, intron 4 of 16) 36207 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638 chr1 160060521 160060992 + 1.51503956548638 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 16376 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-9 chr2 8781392 8781701 + 1.51503956548638 NA Intergenic Intergenic -407969 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-3 chr2 102762250 102762738 + 1.51503956548638 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -15734 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-3 chr1 153502029 153502426 + 1.51503956548638 NA TTS (NM_028749) TTS (NM_028749) -14567 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-17 chr8 124316329 124316628 + 1.51503956548638 NA intron (NM_139272, intron 3 of 15) intron (NM_139272, intron 3 of 15) 85084 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_29_11_1.04557004447797_4.10774752296014_1.51503956548638 chr14 56777948 56778164 + 1.51503956548638 NA exon (NM_025682, exon 1 of 9) exon (NM_025682, exon 1 of 9) 262 NM_001360420 66645 Mm.20129 NM_025682 ENSMUSG00000021938 Pspc1 5730470C09Rik|AI327109|AI449052|PSP1 paraspeckle protein 1 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-14 chr6 31106338 31106665 + 1.51503956548638 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -43408 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638-7 chrX 141494305 141494851 + 1.51503956548638 NA intron (NM_007736, intron 2 of 51) intron (NM_007736, intron 2 of 51) 19159 NM_001163155 12830 Mm.286892 NM_007736 ENSMUSG00000031274 Col4a5 - collagen, type IV, alpha 5 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-2 chr1 135814523 135814759 + 1.51503956548638 NA Intergenic Intergenic -3957 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-11 chr4 108351140 108351406 + 1.51503956548638 NA Intergenic Intergenic 23121 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638-2 chr1 153709621 153710117 + 1.51503956548638 NA Intergenic Intergenic 27960 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-6 chr13 36695850 36696373 + 1.51503956548638 NA Intergenic Intergenic 38366 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638-3 chr10 69213204 69213759 + 1.51503956548638 NA promoter-TSS (NM_001331193) promoter-TSS (NM_001331193) 287 NM_001252638 69288 Mm.26659 NM_001081347 ENSMUSG00000019944 Rhobtb1 1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930 Rho-related BTB domain containing 1 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-12 chr5 24705038 24705387 + 1.51503956548638 NA intron (NM_001305264, intron 11 of 14) intron (NM_001305264, intron 11 of 14) 19397 NM_001305264 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-16 chr8 111538453 111538827 + 1.51503956548638 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 297 NM_001168623 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-2 chr11 103033951 103034375 + 1.51503956548638 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 5620 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638-6 chr19 57396622 57397172 + 1.51503956548638 NA Intergenic Intergenic 35888 NM_145505 226252 Mm.358870 NM_145505 ENSMUSG00000033478 Fam160b1 AI450540|mKIAA1600 family with sequence similarity 160, member B1 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-5 chr10 108334635 108335113 + 1.51503956548638 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 2685 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638 chr1 86529580 86530035 + 1.51503956548638 NA intron (NM_008972, intron 4 of 4) intron (NM_008972, intron 4 of 4) 3250 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-4 chr10 86220526 86220951 + 1.51503956548638 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -79674 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-8 chr15 95790462 95790669 + 1.51503956548638 NA promoter-TSS (NM_001253813) promoter-TSS (NM_001253813) -278 NM_175344 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638 chr1 135740961 135741305 + 1.51503956548638 NA intron (NR_153810, intron 2 of 3) intron (NR_153810, intron 2 of 3) 11966 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-4 chr3 117862221 117862622 + 1.51503956548638 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 6515 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-18 chr9 56867554 56868151 + 1.51503956548638 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 2748 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding common_peak2_29_11_1.04557004447797_4.10774752296014_1.51503956548638-2 chr4 129335616 129335915 + 1.51503956548638 NA promoter-TSS (NM_025970) promoter-TSS (NM_025970) -261 NM_025970 67106 Mm.36575 NM_025970 ENSMUSG00000057572 Zbtb8os 2010001H09Rik|2310028N13Rik|AI851226|Arch|Archm zinc finger and BTB domain containing 8 opposite strand protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-7 chr15 53310622 53310904 + 1.51503956548638 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 35420 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638-4 chr13 112344057 112344603 + 1.51503956548638 NA 3' UTR (NM_001168405, exon 6 of 6) 3' UTR (NM_001168405, exon 6 of 6) 55812 NM_001168404 77318 Mm.159895 NM_029898 ENSMUSG00000049985 Ankrd55 C030011J08Rik ankyrin repeat domain 55 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-10 chr2 180251104 180251667 + 1.51503956548638 NA Intergenic Intergenic -5994 NM_025587 66481 Mm.289669 NM_025587 ENSMUSG00000039001 Rps21 1810049N11Rik|2410030A14Rik ribosomal protein S21 protein-coding unique_peak1_29_11_1.04557004447797_4.10774752296014_1.51503956548638-15 chr8 47972674 47972919 + 1.51503956548638 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 17755 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak2_12_25_-1.26784656411273_4.06651643608472_1.51503956548638-5 chr17 67730694 67731086 + 1.51503956548638 NA intron (NM_008480, intron 3 of 62) intron (NM_008480, intron 3 of 62) 33625 NM_008480 16772 Mm.303386 NM_008480 ENSMUSG00000032796 Lama1 AA408497|Lama laminin, alpha 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-32 chr16 26092910 26093191 + 1.5150158574804 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 12734 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-25 chr14 49063775 49063989 + 1.5150158574804 NA intron (NM_207214, intron 1 of 17) intron (NM_207214, intron 1 of 17) -2667 NM_001360070 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-59 chr4 45343317 45343533 + 1.5150158574804 NA intron (NM_153167, intron 1 of 6) intron (NM_153167, intron 1 of 6) 1324 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-27 chr5 23430874 23431107 + 1.5150158574804 NA TTS (NR_040469) TTS (NR_040469) 3363 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-49 chr2 126429885 126430119 + 1.5150158574804 NA intron (NM_001359975, intron 7 of 27) intron (NM_001359975, intron 7 of 27) 61551 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-10 chr15 13228480 13228760 + 1.5150158574804 NA Intergenic Intergenic -54945 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-5 chr11 12286280 12286501 + 1.5150158574804 NA intron (NM_001282993, intron 8 of 13) intron (NM_001282993, intron 8 of 13) 125750 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-18 chr18 56688738 56688942 + 1.5150158574804 NA Intergenic Intergenic -18973 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-40 chr19 55255393 55255590 + 1.5150158574804 NA intron (NM_027976, intron 1 of 21) intron (NM_027976, intron 1 of 21) 2122 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-35 chr8 67744372 67744637 + 1.5150158574804 NA intron (NM_177698, intron 10 of 14) intron (NM_177698, intron 10 of 14) 73791 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-21 chr13 3700518 3700780 + 1.5150158574804 NA Intergenic Intergenic 66617 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-39 chr18 65303989 65304180 + 1.5150158574804 NA intron (NM_001037294, intron 5 of 12) intron (NM_001037294, intron 5 of 12) 55223 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-8 chr11 40401422 40401750 + 1.5150158574804 NA Intergenic MLT1J1|LTR|ERVL-MaLR 291096 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-60 chr4 87839178 87839404 + 1.5150158574804 NA intron (NM_027326, intron 5 of 10) intron (NM_027326, intron 5 of 10) -32968 NM_029931 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-69 chr5 113212291 113212512 + 1.5150158574804 NA Intergenic Intergenic -14508 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-55 chr3 51669893 51670100 + 1.5150158574804 NA intron (NM_174995, intron 2 of 4) intron (NM_174995, intron 2 of 4) 8817 NM_001310482 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-51 chr2 145759709 145759997 + 1.5150158574804 NA Intergenic Intergenic -26263 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-4 chr11 8624433 8624639 + 1.5150158574804 NA intron (NM_001083587, intron 1 of 30) CpG 39999 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-78 chr7 134258556 134258846 + 1.5150158574804 NA Intergenic Intergenic -33604 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-3 chr1 189866871 189867105 + 1.5150158574804 NA intron (NM_008976, intron 18 of 18) ID4|SINE|ID 55303 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-63 chr4 114339692 114339922 + 1.5150158574804 NA Intergenic Intergenic -66917 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-18 chr12 102326892 102327112 + 1.5150158574804 NA intron (NM_177620, intron 3 of 9) intron (NM_177620, intron 3 of 9) 43361 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-56 chr3 60712169 60712533 + 1.5150158574804 NA Intergenic Intergenic 211172 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-35 chr17 14393796 14394005 + 1.5150158574804 NA intron (NR_027986, intron 1 of 2) intron (NR_027986, intron 1 of 2) 5042 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-68 chr5 108903518 108903736 + 1.5150158574804 NA Intergenic CpG -51117 NM_001104621 435864 Mm.387745 NM_001104621 ENSMUSG00000091624 Vmn2r9 EG435864 vomeronasal 2, receptor 9 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-8 chr13 41677903 41678166 + 1.5150158574804 NA Intergenic Intergenic 71818 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-73 chr6 91655126 91655316 + 1.5150158574804 NA Intergenic Intergenic -28846 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-42 chr2 68219407 68219646 + 1.5150158574804 NA intron (NM_016866, intron 17 of 17) intron (NM_016866, intron 17 of 17) 114854 NM_020283 26877 Mm.226435 NM_020283 ENSMUSG00000034780 B3galt1 beta3Gal-T1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-12 chr16 28862601 28862843 + 1.5150158574804 NA intron (NM_177718, intron 1 of 1) intron (NM_177718, intron 1 of 1) 66976 NM_177718 239796 Mm.155887 NM_177718 ENSMUSG00000051065 Mb21d2 1600021P15Rik|A430031N04|C87006 Mab-21 domain containing 2 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-32 chr7 139467727 139467936 + 1.5150158574804 NA intron (NM_183144, intron 2 of 15) intron (NM_183144, intron 2 of 15) 67337 NM_001355162 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-38 chr17 32332705 32332907 + 1.5150158574804 NA intron (NM_017476, intron 11 of 13) intron (NM_017476, intron 11 of 13) -11568 NR_131218 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-84 chr9 56888494 56888743 + 1.5150158574804 NA exon (NM_139001, exon 3 of 10) exon (NM_139001, exon 3 of 10) 23514 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-46 chr2 90550433 90550761 + 1.5150158574804 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 30050 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-70 chr5 129583791 129584101 + 1.5150158574804 NA promoter-TSS (NM_011846) promoter-TSS (NM_011846) -223 NM_011846 23948 Mm.42047 NM_011846 ENSMUSG00000029436 Mmp17 MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-10 chr11 99474578 99474796 + 1.5150158574804 NA Intergenic Intergenic 18423 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-79 chr8 36703076 36703294 + 1.5150158574804 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 29869 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-34 chr17 12276310 12276539 + 1.5150158574804 NA intron (NM_001357722, intron 2 of 25) intron (NM_001357722, intron 2 of 25) 42236 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-25 chr4 81053348 81053650 + 1.5150158574804 NA Intergenic Intergenic 142813 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-62 chr4 107521328 107521648 + 1.5150158574804 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 86769 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-15 chr12 35538043 35538358 + 1.5150158574804 NA Intergenic Intergenic -3211 NM_001314027 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-15 chr17 52810357 52810590 + 1.5150158574804 NA intron (NM_001031811, intron 5 of 15) intron (NM_001031811, intron 5 of 15) 207764 NM_001031811 211468 Mm.399068 NM_001031811 ENSMUSG00000035580 Kcnh8 C130090D05Rik|ELK|ELK1|ELK3|Kv12.1 potassium voltage-gated channel, subfamily H (eag-related), member 8 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-11 chr15 51853185 51853426 + 1.5150158574804 NA intron (NM_080635, intron 1 of 7) B1_Mus2|SINE|Alu 12156 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-23 chr13 16739650 16739867 + 1.5150158574804 NA Intergenic Intergenic -716335 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-53 chr2 158123289 158123552 + 1.5150158574804 NA intron (NM_009373, intron 10 of 12) intron (NM_009373, intron 10 of 12) 22972 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-76 chr7 101354733 101354991 + 1.5150158574804 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 6793 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804 chr5 33218346 33218588 + 1.5150158574804 NA promoter-TSS (NM_133903) promoter-TSS (NM_133903) -229 NM_133903 100689 Mm.34694 NM_133903 ENSMUSG00000037379 Spon2 2310045I24Rik|AI504350|M-spondin|Mindin|Mspondin spondin 2, extracellular matrix protein protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-58 chr3 151354910 151355155 + 1.5150158574804 NA Intergenic Intergenic -82850 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-17 chr18 5619589 5619811 + 1.5150158574804 NA intron (NM_001360981, intron 2 of 8) MLT1H1|LTR|ERVL-MaLR 27053 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-12 chr12 9276560 9276827 + 1.5150158574804 NA Intergenic Intergenic 246696 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-34 chr8 60696269 60696579 + 1.5150158574804 NA Intergenic Intergenic 40867 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-2 chr1 182057269 182057508 + 1.5150158574804 NA Intergenic Intergenic -37408 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-22 chr13 6189351 6189541 + 1.5150158574804 NA Intergenic Intergenic 327957 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-6 chr11 77348101 77348359 + 1.5150158574804 NA promoter-TSS (NM_001291190) promoter-TSS (NM_001291190) -50 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot protein phosphatase 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-47 chr2 91955836 91956194 + 1.5150158574804 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) -5667 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-2 chr1 133423500 133423722 + 1.5150158574804 NA intron (NM_011439, intron 1 of 13) CpG 601 NM_011439 20668 Mm.8575 NM_011439 ENSMUSG00000070643 Sox13 AA407916|AW259412|AW540933|Sox-13 SRY (sex determining region Y)-box 13 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-28 chr5 115156010 115156211 + 1.5150158574804 NA intron (NM_175403, intron 1 of 4) intron (NM_175403, intron 1 of 4) 2066 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-4 chr10 68192781 68193042 + 1.5150158574804 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 85815 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-13 chr12 15765433 15765638 + 1.5150158574804 NA Intergenic Intergenic 35566 NR_105809 102465204 NR_105809 ENSMUSG00000098480 Mir6387 Gm27281|mmu-mir-6387 microRNA 6387 ncRNA unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-20 chr2 60922948 60923147 + 1.5150158574804 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 40157 NM_020296 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-28 chr15 53108602 53108871 + 1.5150158574804 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 237447 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-17 chr12 84865950 84866161 + 1.5150158574804 NA intron (NM_013589, intron 2 of 34) intron (NM_013589, intron 2 of 34) -9747 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-74 chr6 146967132 146967416 + 1.5150158574804 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -12853 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-5 chr10 120665295 120665623 + 1.5150158574804 NA Intergenic Intergenic -100273 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-9 chr15 5556824 5557028 + 1.5150158574804 NA intron (NR_045274, intron 2 of 4) intron (NR_045274, intron 2 of 4) 60608 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-31 chr6 146892127 146892342 + 1.5150158574804 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 3740 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-82 chr9 29411561 29411821 + 1.5150158574804 NA exon (NM_001357602, exon 1 of 7) exon (NM_001357602, exon 1 of 7) 994 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-13 chr16 57698099 57698328 + 1.5150158574804 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 56524 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-44 chr2 74578167 74578358 + 1.5150158574804 NA intron (NM_001110209, intron 1 of 13) intron (NM_001110209, intron 1 of 13) 686 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-81 chr8 128470362 128470569 + 1.5150158574804 NA intron (NM_001358959, intron 9 of 16) intron (NM_001358959, intron 9 of 16) 111224 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-26 chr4 147784526 147784796 + 1.5150158574804 NA intron (NM_001127189, intron 3 of 5) intron (NM_001127189, intron 3 of 5) 25127 NM_001127189 100041677 Mm.327194 NM_001127189 ENSMUSG00000078495 Zfp984 Gm13157 zinc finger protein 984 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-30 chr16 10968421 10968625 + 1.5150158574804 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 24598 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-20 chr12 103963501 103963694 + 1.5150158574804 NA Intergenic Intergenic -6700 NM_009247 20704 Mm.312593 NM_009247 ENSMUSG00000072849 Serpina1e Dom5|PI5|Spi1-5 serine (or cysteine) peptidase inhibitor, clade A, member 1E protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-19 chr2 33316294 33316535 + 1.5150158574804 NA intron (NM_001290570, intron 3 of 16) intron (NM_001290570, intron 3 of 16) 55080 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-41 chr2 67674631 67674860 + 1.5150158574804 NA promoter-TSS (NR_106083) promoter-TSS (NR_106083) -712 NR_106083 102465706 NR_106083 ENSMUSG00000098299 Mir7224 Gm27971|mmu-mir-7224 microRNA 7224 ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-85 chr9 71502711 71502926 + 1.5150158574804 NA Intergenic Intergenic -16835 NM_178602 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-23 chr3 34217107 34217381 + 1.5150158574804 NA Intergenic Intergenic -135890 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-45 chr2 84550790 84550979 + 1.5150158574804 NA Intergenic ID2|SINE|ID -44011 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-7 chr11 20204821 20205166 + 1.5150158574804 NA intron (NM_008996, intron 1 of 5) B1_Mm|SINE|Alu 3581 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-67 chr5 35922439 35922645 + 1.5150158574804 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 29223 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-14 chr12 27505411 27505663 + 1.5150158574804 NA Intergenic Intergenic -162819 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-52 chr2 155874559 155874795 + 1.5150158574804 NA intron (NM_001355443, intron 7 of 9) intron (NM_001355443, intron 7 of 9) -39823 NM_027788 71405 Mm.260918 NM_027788 ENSMUSG00000074647 Fam83c 5530400B04Rik family with sequence similarity 83, member C protein-coding common_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804 chr14 76731417 76731643 + 1.5150158574804 NA Intergenic Intergenic -28601 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-33 chr8 36673867 36674205 + 1.5150158574804 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 59018 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-77 chr7 109527242 109527441 + 1.5150158574804 NA intron (NM_001001326, intron 16 of 19) intron (NM_001001326, intron 16 of 19) 7209 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-16 chr17 63797357 63797604 + 1.5150158574804 NA Intergenic Intergenic -66501 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-19 chr12 102832961 102833181 + 1.5150158574804 NA intron (NM_172806, intron 4 of 11) intron (NM_172806, intron 4 of 11) 45335 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-50 chr2 132098542 132098801 + 1.5150158574804 NA intron (NM_001355431, intron 2 of 6) intron (NM_001355431, intron 2 of 6) 46437 NM_001355431 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-57 chr3 93523040 93523229 + 1.5150158574804 NA intron (NM_016740, intron 1 of 2) intron (NM_016740, intron 1 of 2) 2638 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-6 chr11 3572914 3573131 + 1.5150158574804 NA Intergenic Intergenic -33730 NM_001284428 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-37 chr17 26659325 26659554 + 1.5150158574804 NA Intergenic URR1B|DNA|hAT-Charlie -16957 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-27 chr15 13258067 13258276 + 1.5150158574804 NA Intergenic Intergenic -84496 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-72 chr6 88968883 88969088 + 1.5150158574804 NA Intergenic Intergenic 66734 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-3 chr1 193021145 193021407 + 1.5150158574804 NA intron (NM_001301370, intron 2 of 8) intron (NM_001301370, intron 2 of 8) 14499 NM_001301370 329324 Mm.76710 NM_181546 ENSMUSG00000016200 Syt14 B230320I09Rik|sytXIV synaptotagmin XIV protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-65 chr5 24427368 24427565 + 1.5150158574804 NA promoter-TSS (NM_001253892) promoter-TSS (NM_001253892) -55 NM_001253892 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-16 chr12 51688319 51688516 + 1.5150158574804 NA intron (NM_001172098, intron 1 of 15) intron (NM_001172098, intron 1 of 15) -2549 NM_001329699 11782 Mm.386749 NM_021710 ENSMUSG00000020955 Ap4s1 AI314282 adaptor-related protein complex AP-4, sigma 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-80 chr8 120947599 120947828 + 1.5150158574804 NA Intergenic Intergenic 135397 NR_045471 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804 chr1 89556093 89556293 + 1.5150158574804 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 101382 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-29 chr5 143052198 143052478 + 1.5150158574804 NA intron (NM_001359851, intron 12 of 15) GA-rich|Low_complexity|Low_complexity 60682 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-22 chr2 158306807 158307120 + 1.5150158574804 NA intron (NM_008489, intron 1 of 14) intron (NM_008489, intron 1 of 14) 470 NM_008489 16803 Mm.218846 NM_008489 ENSMUSG00000016024 Lbp Bpifd2|Ly88 lipopolysaccharide binding protein protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-66 chr5 26822399 26822641 + 1.5150158574804 NA intron (NM_010075, intron 1 of 25) intron (NM_010075, intron 1 of 25) 5163 NM_010075 13483 Mm.42078 NM_010075 ENSMUSG00000061576 Dpp6 B930011P16Rik|D5Buc3|D5Buc4|D5Buc5|DPP VI|Dpp-6|Gm1377|In(5)6H-p|Peplb|Rw dipeptidylpeptidase 6 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-7 chr12 81697895 81698104 + 1.5150158574804 NA Intergenic Intergenic 66750 NM_001033149 69480 Mm.130002 NM_001033149 ENSMUSG00000042734 Ttc9 - tetratricopeptide repeat domain 9 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-24 chr13 74381638 74381837 + 1.5150158574804 NA Intergenic Intergenic -5171 NM_001081680 238722 Mm.461254 NM_001081680 ENSMUSG00000069184 Zfp72 Zfp74 zinc finger protein 72 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804 chr1 157367314 157367562 + 1.5150158574804 NA intron (NM_177644, intron 1 of 17) B4A|SINE|B4 -44914 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-64 chr4 137757564 137757779 + 1.5150158574804 NA intron (NM_001287172, intron 2 of 11) intron (NM_001287172, intron 2 of 11) 8804 NM_001287172 11647 Mm.288186 NM_007431 ENSMUSG00000028766 Alpl ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-21 chr2 73721921 73722184 + 1.5150158574804 NA intron (NM_001113246, intron 1 of 12) intron (NM_001113246, intron 1 of 12) 53294 NM_001166603 108699 Mm.257073 NM_029716 ENSMUSG00000056486 Chn1 0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2 chimerin 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-11 chr12 8877942 8878185 + 1.5150158574804 NA Intergenic Intergenic -43244 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-48 chr2 126299449 126299636 + 1.5150158574804 NA Intergenic Intergenic 147401 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-26 chr14 118137716 118137949 + 1.5150158574804 NA intron (NM_021434, intron 1 of 8) intron (NM_021434, intron 1 of 8) 705 NM_021434 58245 Mm.275411 NM_021434 ENSMUSG00000022131 Gpr180 AB041545|E130016I23Rik|Itr G protein-coupled receptor 180 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-33 chr16 94498146 94498412 + 1.5150158574804 NA 3' UTR (NM_007834, exon 8 of 8) 3' UTR (NM_007834, exon 8 of 8) 28350 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-83 chr9 54552903 54553121 + 1.5150158574804 NA intron (NM_019686, intron 2 of 5) intron (NM_019686, intron 2 of 5) 7067 NM_019686 56506 Mm.42192 NM_019686 ENSMUSG00000037493 Cib2 2810434I23Rik|AI449053 calcium and integrin binding family member 2 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-43 chr2 72446463 72446674 + 1.5150158574804 NA Intergenic Intergenic -29651 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-29 chr16 8539794 8540076 + 1.5150158574804 NA intron (NM_001170978, intron 1 of 14) intron (NM_001170978, intron 1 of 14) 26506 NM_172961 268860 Mm.259315 NM_172961 ENSMUSG00000057880 Abat 9630038C02Rik|AI255750|Gabaat|Gabat|Gm9851|I54|Laibat|X61497 4-aminobutyrate aminotransferase protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-24 chr4 32101676 32101885 + 1.5150158574804 NA Intergenic Intergenic 137673 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-14 chr17 42603204 42603410 + 1.5150158574804 NA intron (NM_181753, intron 2 of 6) intron (NM_181753, intron 2 of 6) 8006 NM_181753 353344 Mm.184937 NM_181753 ENSMUSG00000043972 Opn5 Gpr136|Neuropsin|PGR12|TMEM13 opsin 5 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-61 chr4 103368376 103368571 + 1.5150158574804 NA Intergenic Intergenic -14027 NR_040673 622167 Mm.244115 NR_040673 ENSMUSG00000086136 Gm12718 - predicted gene 12718 ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-71 chr6 15758891 15759158 + 1.5150158574804 NA intron (NM_175088, intron 3 of 4) intron (NM_175088, intron 3 of 4) 38363 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding unique_peak2_4_10_-1.39562471651913_2.76161926037773_1.5150158574804-30 chr6 30167928 30168149 + 1.5150158574804 NA intron (NR_126540, intron 1 of 1) intron (NR_126540, intron 1 of 1) 1513 NR_029750 723886 NR_029750 ENSMUSG00000065586 Mir96 Mirn96|mir-96|mmu-mir-96 microRNA 96 ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-36 chr17 17824297 17824500 + 1.5150158574804 NA Intergenic Intergenic -5790 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-54 chr3 22010310 22010574 + 1.5150158574804 NA Intergenic Intergenic -66210 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-31 chr16 23991436 23991715 + 1.5150158574804 NA Intergenic Intergenic -2723 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-9 chr11 62219779 62220013 + 1.5150158574804 NA 3' UTR (NM_001281818, exon 15 of 15) 3' UTR (NM_001281818, exon 15 of 15) -29088 NM_007413 11541 Mm.40740 NM_007413 ENSMUSG00000018500 Adora2b A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384 adenosine A2b receptor protein-coding unique_peak1_11_4_0.996002531131133_2.81992936045293_1.5150158574804-75 chr7 16580356 16580631 + 1.5150158574804 NA intron (NM_172739, intron 1 of 6) intron (NM_172739, intron 1 of 6) -33331 NR_136928 102634559 Mm.421602 NR_136928 ENSMUSG00000100583 Gm29443 - predicted gene 29443 ncRNA common_peak2_77_40_0.64176679249124_5.6784354008637_1.51460024573214 chr14 69283965 69284903 + 1.51460024573214 NA intron (NM_026331, intron 1 of 3) CpG 669 NM_026331 67712 Mm.293635 NM_026331 ENSMUSG00000034248 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mfrn|Mfrn1|Mscp|frascati|mitoferrin solute carrier family 25, member 37 protein-coding common_peak1_77_40_0.64176679249124_5.6784354008637_1.51460024573214 chr6 51119232 51120008 + 1.51460024573214 NA Intergenic Intergenic 150290 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak2_77_40_0.64176679249124_5.6784354008637_1.51460024573214-4 chr8 119427888 119428343 + 1.51460024573214 NA Intergenic Intergenic -9047 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_77_40_0.64176679249124_5.6784354008637_1.51460024573214-3 chr7 66576736 66577161 + 1.51460024573214 NA Intergenic Intergenic 112613 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_77_40_0.64176679249124_5.6784354008637_1.51460024573214-2 chr7 99482978 99483615 + 1.51460024573214 NA promoter-TSS (NR_002172) promoter-TSS (NR_002172) -364 NR_002172 449630 Mm.454449 NR_002172 ENSMUSG00000065822 Snord15a EG449630|Gm5774|RNU15A|Rnu15-a|U15A small nucleolar RNA, C/D box 15A snoRNA common_peak2_48_64_-0.6890096696624_5.67786297819725_1.51460024573214 chr15 28133638 28134235 + 1.51460024573214 NA Intergenic Intergenic -69830 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak2_77_40_0.64176679249124_5.6784354008637_1.51460024573214-2 chr3 41285319 41285680 + 1.51460024573214 NA Intergenic Intergenic -202453 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_47_64_-0.718547146156449_5.66309423995023_1.51460024573214 chr4 132260389 132261074 + 1.51460024573214 NA intron (NM_001122992, intron 1 of 10) intron (NM_001122992, intron 1 of 10) 818 NM_020273 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding unique_peak1_77_40_0.64176679249124_5.6784354008637_1.51460024573214 chr5 125053097 125054191 + 1.51460024573214 NA intron (NM_011424, intron 18 of 46) PB1D10|SINE|Alu 50169 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_116_66_0.514065208879006_6.32312179489728_1.51439505488463 chr3 57511322 57512372 + 1.51439505488463 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 64029 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_79_96_-0.564325858361942_6.31774991300616_1.51439505488461 chr1 118388232 118389202 + 1.51439505488461 NA promoter-TSS (NM_001359346) promoter-TSS (NM_001359346) -341 NM_001359329 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak1_124_71_0.504975779890631_6.42241289138763_1.51380368302103 chr10 18470754 18471770 + 1.51380368302103 NA intron (NM_001163592, intron 1 of 7) intron (NM_001163592, intron 1 of 7) 1281 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding common_peak2_57_74_-0.653905669118614_5.90186585593657_1.51351677847088 chr7 139364618 139365499 + 1.51351677847088 NA Intergenic Intergenic -24051 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak2_105_121_-0.49202226186627_6.68472620662975_1.51330020762793 chr16 11456134 11457229 + 1.51330020762793 NA intron (NM_028964, intron 13 of 20) intron (NM_028964, intron 13 of 20) 51033 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_52_69_-0.683512961675106_5.78752653610741_1.5120604183303 chr7 139363334 139364103 + 1.5120604183303 NA Intergenic Intergenic -25391 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak1_83_44_0.613626620116461_5.79866640638791_1.5120604183303 chr3 95687406 95688177 + 1.5120604183303 NA intron (NM_001301705, intron 1 of 17) intron (NM_001301705, intron 1 of 17) 126 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_83_44_0.613626620116461_5.79866640638791_1.5120604183303 chr12 70891462 70892363 + 1.5120604183303 NA intron (NM_028127, intron 10 of 13) MLT1A1|LTR|ERVL-MaLR -45945 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak2_53_69_-0.656736166044807_5.80091493392256_1.5120604183303 chr19 10555413 10556144 + 1.5120604183303 NA promoter-TSS (NM_001277861) promoter-TSS (NM_001277861) -15 NM_001277860 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding common_peak2_53_69_-0.656736166044807_5.80091493392256_1.5120604183303-2 chr2 129206131 129206815 + 1.5120604183303 NA promoter-TSS (NM_001355252) promoter-TSS (NM_001355252) -623 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_200_124_0.389549355632512_7.16055896247834_1.51131231217175 chr4 45504144 45506973 + 1.51131231217175 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 25270 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_151_164_-0.411268718847158_7.16068785482224_1.51131231217175 chr1 43098013 43099374 + 1.51131231217175 NA promoter-TSS (NM_133818) promoter-TSS (NM_133818) -17 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding common_peak2_128_142_-0.439848183914746_6.93994724482102_1.50911277426746 chr15 63997064 63998124 + 1.50911277426746 NA intron (NM_144846, intron 1 of 11) CpG 472 NM_001360035 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_173_105_0.420773189468279_6.93830704929734_1.50911277426744 chr9 85748624 85750014 + 1.50911277426744 NA promoter-TSS (NM_001081282) promoter-TSS (NM_001081282) 15 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding common_peak1_66_33_0.694090176390048_5.43450792944536_1.50810240303318 chr15 62320032 62320975 + 1.50810240303318 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -101052 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_66_33_0.694090176390048_5.43450792944536_1.50810240303318-2 chr5 138132855 138133536 + 1.50810240303318 NA exon (NM_011757, exon 5 of 5) exon (NM_011757, exon 5 of 5) 16290 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak2_66_33_0.694090176390048_5.43450792944536_1.50810240303318 chr15 98917585 98918091 + 1.50810240303318 NA intron (NM_029098, intron 1 of 16) CpG 260 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding common_peak2_39_55_-0.764712958659174_5.42499844272802_1.50810240303318 chr18 32837063 32837935 + 1.50810240303318 NA promoter-TSS (NR_045381) promoter-TSS (NR_045381) -212 NR_045381 75795 Mm.382634 NR_045381 ENSMUSG00000097553 4930455D15Rik - RIKEN cDNA 4930455D15 gene ncRNA common_peak2_69_85_-0.581963741729539_6.13528288383733_1.50781993660218 chr11 35971012 35971703 + 1.50781993660218 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 8732 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_140_82_0.472402494609341_6.61124067865159_1.50708012376454 chr15 83555116 83556031 + 1.50708012376454 NA exon (NM_001030014, exon 1 of 4) exon (NM_001030014, exon 1 of 4) 138 NM_001030014 223722 Mm.37560 NM_001030014 ENSMUSG00000048755 Mcat AI225907|BC025519 malonyl CoA:ACP acyltransferase (mitochondrial) protein-coding common_peak2_99_115_-0.502737112548508_6.60661243885332_1.50708012376452 chr10 108332192 108333449 + 1.50708012376452 NA exon (NM_054056, exon 2 of 7) exon (NM_054056, exon 2 of 7) 631 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_99_115_-0.502737112548508_6.60661243885332_1.50708012376452-3 chr13 51885574 51886751 + 1.50708012376452 NA Intergenic Intergenic 39487 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_99_115_-0.502737112548508_6.60661243885332_1.50708012376452-2 chr13 29984415 29985999 + 1.50708012376452 NA promoter-TSS (NM_001289920) promoter-TSS (NM_001289920) -816 NM_001359994 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding unique_peak2_21_35_-0.983694619272008_4.67807769180631_1.50628532113231-2 chr16 14450386 14451038 + 1.50628532113231 NA intron (NM_008576, intron 19 of 30) B3A|SINE|B2 89154 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-5 chr9 47406711 47407124 + 1.50628532113231 NA Intergenic Intergenic -123253 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-4 chr7 130673418 130674091 + 1.50628532113231 NA intron (NM_206856, intron 3 of 20) intron (NM_206856, intron 3 of 20) -18802 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding unique_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-4 chrX 95962770 95963302 + 1.50628532113231 NA Intergenic MMERVK10D3_I-int|LTR|ERVK -6062 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding common_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231-2 chr15 3878641 3879130 + 1.50628532113231 NA Intergenic Intergenic 100688 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231-5 chr9 103072320 103072769 + 1.50628532113231 NA intron (NM_033314, intron 6 of 13) intron (NM_033314, intron 6 of 13) -39530 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231-3 chr2 32917065 32917548 + 1.50628532113231 NA intron (NM_146119, intron 5 of 13) intron (NM_146119, intron 5 of 13) 41172 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_21_35_-0.983694619272008_4.67807769180631_1.50628532113231 chr15 60837932 60838178 + 1.50628532113231 NA Intergenic Intergenic -12975 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-2 chr2 61401852 61402201 + 1.50628532113231 NA Intergenic Intergenic -176560 NM_011529 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding unique_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-2 chr14 96518307 96519102 + 1.50628532113231 NA 5' UTR (NM_053105, exon 1 of 11) 5' UTR (NM_053105, exon 1 of 11) 330 NM_053105 93688 Mm.308735 NM_053105 ENSMUSG00000022076 Klhl1 mKIAA1490 kelch-like 1 protein-coding unique_peak2_21_35_-0.983694619272008_4.67807769180631_1.50628532113231 chr13 23555102 23555661 + 1.50628532113231 NA exon (NM_145713, exon 1 of 1) exon (NM_145713, exon 1 of 1) 349 NM_145713 14957 Mm.247046 NM_145713 ENSMUSG00000052565 Hist1h1d H1.3|H1D|H1f3|H1s-4 histone cluster 1, H1d protein-coding common_peak2_41_18_0.864607182575795_4.68023110473148_1.50628532113231 chr11 118160075 118160531 + 1.50628532113231 NA Intergenic Intergenic -31084 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231-3 chr2 93901966 93902580 + 1.50628532113231 NA Intergenic Intergenic -33116 NM_001033452 381411 Mm.9889 NM_001033452 ENSMUSG00000075023 Accsl Gm1967 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like protein-coding common_peak2_21_35_-0.983694619272008_4.67807769180631_1.50628532113231 chr5 33018316 33018659 + 1.50628532113231 NA promoter-TSS (NM_011738) promoter-TSS (NM_011738) -329 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding common_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231 chr11 26593188 26593683 + 1.50628532113231 NA intron (NM_027260, intron 1 of 12) CpG 485 NM_027260 69922 Mm.285351 NM_027260 ENSMUSG00000064090 Vrk2 2810003O05Rik|AI447698 vaccinia related kinase 2 protein-coding unique_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231 chr1 171150799 171151558 + 1.50628532113231 NA promoter-TSS (NM_025321) promoter-TSS (NM_025321) 465 NM_008623 17528 Mm.9986 NM_008623 ENSMUSG00000056569 Mpz Mpp|P-zero|P0 myelin protein zero protein-coding unique_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-3 chr9 65460996 65461732 + 1.50628532113231 NA intron (NM_138584, intron 1 of 8) intron (NM_138584, intron 1 of 8) 427 NM_138584 27965 Mm.272475 NM_138584 ENSMUSG00000032388 Spg21 ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST SPG21, maspardin protein-coding common_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231-3 chr3 96221233 96222005 + 1.50628532113231 NA promoter-TSS (NM_175662) promoter-TSS (NM_175662) 547 NM_178214 319190 Mm.439791 NM_178214 ENSMUSG00000068854 Hist2h2be AV127319|H2b-613|T25626 histone cluster 2, H2be protein-coding unique_peak1_42_18_0.898315016765847_4.69708502182651_1.50628532113231 chr1 72068796 72069205 + 1.50628532113231 NA Intergenic Intergenic -63805 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA common_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231 chr10 95707736 95708245 + 1.50628532113231 NA Intergenic Intergenic -143844 NM_001358996 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231-4 chr6 43256372 43256931 + 1.50628532113231 NA Intergenic Intergenic -8993 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding unique_peak1_41_18_0.864607182575795_4.68023110473148_1.50628532113231-2 chr13 30681773 30682430 + 1.50628532113231 NA intron (NM_134068, intron 3 of 7) intron (NM_134068, intron 3 of 7) 22042 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding unique_peak2_21_35_-0.983694619272008_4.67807769180631_1.50628532113231-3 chr8 23198592 23199041 + 1.50628532113231 NA intron (NM_018743, intron 1 of 12) intron (NM_018743, intron 1 of 12) 9637 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding unique_peak1_4_0_2.06380690211816_1.03190345105908_1.50514997831991-2 chr18 77664218 77664456 + 1.50514997831991 NA intron (NM_178670, intron 2 of 4) Tigger7|DNA|TcMar-Tigger 49673 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding unique_peak1_4_0_2.06380690211816_1.03190345105908_1.50514997831991-3 chr5 118598534 118598725 + 1.50514997831991 NA intron (NM_001347445, intron 2 of 30) B3A|SINE|B2 37910 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding unique_peak1_4_0_2.06380690211816_1.03190345105908_1.50514997831991-4 chr7 97515850 97516080 + 1.50514997831991 NA intron (NM_001358012, intron 12 of 22) B2_Mm2|SINE|B2 35009 NM_001358012 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding unique_peak1_4_0_2.06380690211816_1.03190345105908_1.50514997831991 chr13 112319226 112319430 + 1.50514997831991 NA intron (NM_001168403, intron 3 of 11) L1MDa|LINE|L1 30810 NM_001168404 77318 Mm.159895 NM_029898 ENSMUSG00000049985 Ankrd55 C030011J08Rik ankyrin repeat domain 55 protein-coding unique_peak1_4_0_2.06380690211816_1.03190345105908_1.50514997831991-5 chr9 98319201 98319479 + 1.50514997831991 NA intron (NM_001357445, intron 1 of 3) L2c|LINE|L2 22770 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_93_109_-0.51475338979585_6.52398301862674_1.50247567844108 chr6 115675374 115676514 + 1.50247567844108 NA promoter-TSS (NR_152134) promoter-TSS (NR_152134) -24 NR_152134 352968 Mm.184163 NR_152134 D830050J10Rik - RIKEN cDNA D830050J10 gene ncRNA common_peak1_133_77_0.489095819204895_6.5299501284647_1.50247567844108 chr14 55643005 55644012 + 1.50247567844108 NA promoter-TSS (NM_001360063) promoter-TSS (NM_001360063) -137 NM_001360063 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding common_peak1_93_109_-0.51475338979585_6.52398301862674_1.50247567844108 chr10 67284481 67285299 + 1.50247567844108 NA intron (NM_001036293, intron 1 of 3) CpG 391 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding common_peak2_136_150_-0.432189165209299_7.02231015672043_1.50205793126621 chr8 22705899 22706942 + 1.50205793126621 NA intron (NM_001159774, intron 1 of 21) CpG 163 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak2_74_91_-0.58042749167725_6.23334821021839_1.50188186727175 chr4 44166951 44168017 + 1.50188186727175 NA promoter-TSS (NM_175201) promoter-TSS (NM_175201) 54 NM_175201 73469 Mm.262859 NM_175201 ENSMUSG00000035696 Rnf38 1700065B19Rik|2610202O07Rik|AA673263|Oip1 ring finger protein 38 protein-coding common_peak2_75_91_-0.561453481085111_6.24283521551446_1.50188186727175-2 chr5 77383134 77384222 + 1.50188186727175 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 24367 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_75_91_-0.561453481085111_6.24283521551446_1.50188186727175 chr4 117914699 117915437 + 1.50188186727175 NA promoter-TSS (NM_146152) promoter-TSS (NM_146152) -69 NM_146152 230673 Mm.287810 NM_146152 ENSMUSG00000033365 Ipo13 Imp13|Kap13|Ranbp13 importin 13 protein-coding common_peak1_110_62_0.527461440211736_6.24101064360578_1.50188186727174 chr17 70738686 70739606 + 1.50188186727174 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 107631 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_110_62_0.527461440211736_6.24101064360578_1.50188186727174 chr15 76192135 76192777 + 1.50188186727174 NA intron (NM_201394, intron 5 of 31) intron (NM_201394, intron 5 of 31) 3254 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_106_122_-0.490348468310081_6.6973402711842_1.50165168251115 chr16 18811859 18812869 + 1.50165168251115 NA promoter-TSS (NM_009862) promoter-TSS (NM_009862) 70 NM_011672 22230 Mm.237594 NM_011672 ENSMUSG00000005262 Ufd1 Ufd1l ubiquitin recognition factor in ER-associated degradation 1 protein-coding common_peak2_149_88_0.460346053840121_6.70590645788646_1.50165168251115 chr8 45018250 45019093 + 1.50165168251115 NA intron (NM_001081286, intron 8 of 25) intron (NM_001081286, intron 8 of 25) 46747 NR_033588 434310 Mm.334512 NR_033588 ENSMUSG00000066158 AY512931 - cDNA sequence AY512931 ncRNA common_peak1_149_88_0.460346053840121_6.70590645788646_1.50165168251115 chr2 32395146 32396812 + 1.50165168251115 NA promoter-TSS (NM_133783) promoter-TSS (NM_133783) 89 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding common_peak1_460_440_-0.240178796713479_8.66454544720078_1.50137482106628 chr15 79949390 79953202 + 1.50137482106628 NA Intergenic Intergenic -18650 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_263_169_0.336510109540326_7.57764599090786_1.50048013506682 chr3 108910373 108912263 + 1.50048013506682 NA exon (NM_025845, exon 1 of 6) exon (NM_025845, exon 1 of 6) 411 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding common_peak1_274_177_0.32864580999193_7.64005633596236_1.4999890891195 chr13 113615844 113618556 + 1.4999890891195 NA exon (NM_130796, exon 1 of 2) exon (NM_130796, exon 1 of 2) 1364 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_125_72_0.496490759793573_6.4380699387768_1.49979460444319 chr17 35701810 35703427 + 1.49979460444319 NA promoter-TSS (NM_001198831) promoter-TSS (NM_001198831) -574 NM_001198831 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak2_63_80_-0.623919917813317_6.02789004397797_1.49957121854836 chr11 79711434 79712284 + 1.49957121854836 NA promoter-TSS (NR_029579) promoter-TSS (NR_029579) -110 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA common_peak2_63_80_-0.623919917813317_6.02789004397797_1.49957121854836-2 chr15 99848293 99848892 + 1.49957121854836 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 26864 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_64_80_-0.601709909248877_6.03899504826019_1.49957121854836 chr9 6540708 6541551 + 1.49957121854836 NA Intergenic Intergenic -274582 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_97_53_0.571415661629342_6.04059533297814_1.49957121854836 chr8 49388698 49389589 + 1.49957121854836 NA Intergenic Intergenic -714453 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak1_129_143_-0.438839887379809_6.95050505775241_1.49933656472644 chr8 22706058 22706976 + 1.49933656472644 NA promoter-TSS (NM_010546) promoter-TSS (NM_010546) 66 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_188_198_-0.369473699642604_7.45188777072235_1.49846960568174 chr7 127966433 127968241 + 1.49846960568174 NA promoter-TSS (NM_001347649) promoter-TSS (NM_001347649) -142 NM_001347649 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding common_peak1_166_100_0.43166088927475_6.87404192738917_1.49816780976792 chr4 43381408 43382834 + 1.49816780976792 NA 5' UTR (NM_001037709, exon 1 of 12) 5' UTR (NM_001037709, exon 1 of 12) 139 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_145_158_-0.415522499291673_7.10512170563852_1.49735090824443 chr10 71158229 71159640 + 1.49735090824443 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 756 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_61_30_0.716253229165907_5.31232292496983_1.49688973786044 chr10 4158710 4159429 + 1.49688973786044 NA intron (NM_001170785, intron 27 of 27) intron (NM_001170785, intron 27 of 27) 54051 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_61_30_0.716253229165907_5.31232292496983_1.49688973786044-2 chr17 32036080 32037050 + 1.49688973786044 NA exon (NM_028244, exon 1 of 16) exon (NM_028244, exon 1 of 16) 403 NM_028244 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding common_peak1_61_30_0.716253229165907_5.31232292496983_1.49688973786044 chr1 160058308 160059114 + 1.49688973786044 NA intron (NM_001162896, intron 1 of 2) MIRc|SINE|MIR 14331 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak2_61_30_0.716253229165907_5.31232292496983_1.49688973786044 chr8 18781661 18782124 + 1.49688973786044 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -40330 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_61_30_0.716253229165907_5.31232292496983_1.49688973786044-3 chr3 139074531 139075167 + 1.49688973786044 NA intron (NM_001356388, intron 1 of 13) CpG 352 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak2_35_51_-0.808728469468387_5.2960754834069_1.49688973786043 chr17 75465925 75466655 + 1.49688973786043 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 752 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak1_72_37_0.656487922122341_5.57617147450476_1.49662016474183 chr14 105588120 105588699 + 1.49662016474183 NA Intergenic Intergenic -1140 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA common_peak1_72_37_0.656487922122341_5.57617147450476_1.49662016474183-2 chr8 120064721 120065535 + 1.49662016474183 NA Intergenic Intergenic 36344 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_44_60_-0.719369190136303_5.57105274249474_1.49662016474182-2 chr2 34371525 34372727 + 1.49662016474182 NA promoter-TSS (NM_016768) promoter-TSS (NM_016768) -81 NM_016768 18516 Mm.239941 NM_016768 ENSMUSG00000038718 Pbx3 - pre B cell leukemia homeobox 3 protein-coding common_peak2_44_60_-0.719369190136303_5.57105274249474_1.49662016474182 chr14 16509940 16511082 + 1.49662016474182 NA intron (NM_001289760, intron 4 of 9) intron (NM_001289760, intron 4 of 9) 64965 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding common_peak1_44_60_-0.719369190136303_5.57105274249474_1.49662016474182-2 chr1 182091851 182092579 + 1.49662016474182 NA Intergenic Intergenic -32522 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak1_44_60_-0.719369190136303_5.57105274249474_1.49662016474182 chr1 180851155 180851487 + 1.49662016474182 NA intron (NM_145943, intron 1 of 6) intron (NM_145943, intron 1 of 6) 170 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak2_298_194_0.316911159137472_7.76578589331835_1.49661023560313 chr15 76008242 76009886 + 1.49661023560313 NA intron (NM_134087, intron 1 of 4) CpG 434 NM_001168253 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding common_peak2_101_116_-0.486753239592743_6.62698809978703_1.49484534480131 chr9 65550608 65551827 + 1.49484534480131 NA Intergenic Intergenic 28870 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_227_234_-0.340627848938886_7.70620302209556_1.49484446592383 chr11 98026145 98027520 + 1.49484446592383 NA promoter-TSS (NM_009078) promoter-TSS (NM_009078) -92 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding common_peak1_222_140_0.364573320585423_7.32183801269151_1.49401552164519 chr19 37958934 37960677 + 1.49401552164519 NA exon (NM_001099634, exon 20 of 53) exon (NM_001099634, exon 20 of 53) 83772 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_310_203_0.308184722035891_7.82651770298944_1.49392731732112 chr1 132353733 132355186 + 1.49392731732112 NA Intergenic Intergenic 13489 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_59_75_-0.6244499478177_5.93570253953474_1.49366317365515-2 chr16 10979089 10979992 + 1.49366317365515 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 13581 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_59_75_-0.6244499478177_5.93570253953474_1.49366317365515 chr11 53430315 53430840 + 1.49366317365515 NA exon (NM_001326614, exon 2 of 3) exon (NM_001326614, exon 2 of 3) 254 NM_025352 22272 Mm.251621 NM_025352 ENSMUSG00000044894 Uqcrq 1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502 ubiquinol-cytochrome c reductase, complex III subunit VII protein-coding common_peak1_91_49_0.591942132448287_5.93982725599887_1.49366317365514 chr3 80056124 80057719 + 1.49366317365514 NA Intergenic Intergenic 170991 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_90_49_0.576286054681274_5.93199921711536_1.49366317365514 chr17 83275770 83276981 + 1.49366317365514 NA Intergenic CpG 61092 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding common_peak1_137_151_-0.43129358899312_7.03228071894702_1.49289531221465 chr15 74678430 74680359 + 1.49289531221465 NA Intergenic Intergenic -6824 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak1_46_21_0.814229684664757_4.86654646096968_1.49187957593-2 chr3 144091911 144092373 + 1.49187957593 NA Intergenic Intergenic 110190 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_46_21_0.814229684664757_4.86654646096968_1.49187957593-3 chr7 25221413 25221713 + 1.49187957593 NA intron (NM_175436, intron 1 of 2) intron (NM_175436, intron 1 of 2) 138 NM_175436 210172 Mm.129371 NM_175436 ENSMUSG00000046541 Zfp526 D030024H03Rik|Znf526 zinc finger protein 526 protein-coding common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-2 chr11 19018066 19018659 + 1.49187957593 NA 5' UTR (NM_001193271, exon 1 of 13) 5' UTR (NM_001193271, exon 1 of 13) 607 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak2_24_39_-0.952574253161811_4.84564096830646_1.49187957593 chr19 5798629 5799043 + 1.49187957593 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) -2855 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-5 chr2 117474076 117474531 + 1.49187957593 NA Intergenic Intergenic -131426 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_46_21_0.814229684664757_4.86654646096968_1.49187957593-6 chr9 94692154 94692602 + 1.49187957593 NA intron (NM_177909, intron 2 of 15) intron (NM_177909, intron 2 of 15) 22486 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_46_21_0.814229684664757_4.86654646096968_1.49187957593-5 chr9 41156938 41157582 + 1.49187957593 NA intron (NM_176860, intron 1 of 13) CpG 802 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|STS-1|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_46_21_0.814229684664757_4.86654646096968_1.49187957593 chr1 171344982 171345460 + 1.49187957593 NA promoter-TSS (NM_001360824) promoter-TSS (NM_001360824) 267 NM_001360825 18637 Mm.10756 NM_011070 ENSMUSG00000006412 Pfdn2 ESTM27|W48336 prefoldin 2 protein-coding common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-4 chr19 16285883 16286343 + 1.49187957593 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 28891 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_24_39_-0.952574253161811_4.84564096830646_1.49187957593 chr13 104516035 104516448 + 1.49187957593 NA Intergenic Intergenic 228406 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-7 chr6 52160429 52160870 + 1.49187957593 NA intron (NR_131181, intron 1 of 1) intron (NR_131181, intron 1 of 1) 2125 NR_131181 105242658 Mm.372521 NR_131181 ENSMUSG00000087658 Hotairm1 Gm15051|Hoxaas1 Hoxa transcript antisense RNA, myeloid-specific 1 ncRNA common_peak1_46_21_0.814229684664757_4.86654646096968_1.49187957593-4 chr9 32628735 32629262 + 1.49187957593 NA Intergenic Intergenic -67044 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-3 chr8 126539155 126539603 + 1.49187957593 NA Intergenic Intergenic 54057 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_46_21_0.814229684664757_4.86654646096968_1.49187957593 chr4 139574763 139575150 + 1.49187957593 NA exon (NM_001205173, exon 1 of 9) exon (NM_001205173, exon 1 of 9) 236 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-3 chr12 77950242 77950844 + 1.49187957593 NA Intergenic Intergenic -276112 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak1_24_39_-0.952574253161811_4.84564096830646_1.49187957593-2 chr17 35823429 35823943 + 1.49187957593 NA TTS (NM_133662) TTS (NM_133662) 329 NM_008027 14251 Mm.2931 NM_008027 ENSMUSG00000059714 Flot1 reggie-2 flotillin 1 protein-coding common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-6 chr5 5341683 5342221 + 1.49187957593 NA intron (NM_011074, intron 2 of 14) intron (NM_011074, intron 2 of 14) 38299 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding unique_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593-2 chr7 128417728 128418479 + 1.49187957593 NA promoter-TSS (NM_026418) promoter-TSS (NM_026418) 69 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding common_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593 chr10 45067400 45067635 + 1.49187957593 NA intron (NM_011156, intron 1 of 14) CpG 303 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding unique_peak2_25_39_-0.89638992043225_4.87373313467124_1.49187957593 chr5 21554192 21554761 + 1.49187957593 NA intron (NM_001199632, intron 10 of 20) intron (NM_001199632, intron 10 of 20) 10949 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-25 chr3 55610751 55611114 + 1.49151883326344 NA Intergenic ID4_|SINE|ID 149204 NM_001357476 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-18 chr14 8099971 8100189 + 1.49151883326344 NA intron (NM_001360314, intron 1 of 19) intron (NM_001360314, intron 1 of 19) 1869 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-6 chr10 67865234 67865471 + 1.49151883326344 NA Intergenic Intergenic 47310 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-47 chr9 83576084 83576468 + 1.49151883326344 NA intron (NM_172507, intron 1 of 3) intron (NM_172507, intron 1 of 3) 27938 NM_172507 212531 Mm.491246 NM_172507 ENSMUSG00000032261 Sh3bgrl2 A930014C21Rik|AA408038|B930089I21 SH3 domain binding glutamic acid-rich protein like 2 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-5 chr11 90814786 90815115 + 1.49151883326344 NA intron (NR_045956, intron 1 of 2) intron (NR_045956, intron 1 of 2) 10259 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-13 chr14 57295302 57295636 + 1.49151883326344 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 103014 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-3 chr9 43777629 43777878 + 1.49151883326344 NA intron (NM_021424, intron 1 of 5) intron (NM_021424, intron 1 of 5) 33177 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-51 chrX 108833537 108833955 + 1.49151883326344 NA promoter-TSS (NR_015493) promoter-TSS (NR_015493) 609 NM_001081477 382236 Mm.100112 NM_001081477 ENSMUSG00000063663 Brwd3 Brodl|D030064D06Rik|Gm596 bromodomain and WD repeat domain containing 3 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-43 chr8 115083026 115083285 + 1.49151883326344 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 623739 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-12 chr11 100286530 100286807 + 1.49151883326344 NA Intergenic Intergenic -16797 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-28 chr3 98198673 98198931 + 1.49151883326344 NA Intergenic Intergenic -23354 NM_026328 67709 Mm.46306 NM_026328 ENSMUSG00000027876 Reg4 2010002L15Rik|GISP|RELP regenerating islet-derived family, member 4 protein-coding common_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-2 chr16 8829499 8829695 + 1.49151883326344 NA promoter-TSS (NM_001081400) promoter-TSS (NM_001081400) -503 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-8 chr12 16532683 16532970 + 1.49151883326344 NA Intergenic Intergenic 56944 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 Lipin1|fld lipin 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-50 chrX 152342159 152342395 + 1.49151883326344 NA exon (NM_001358369, exon 1 of 7) exon (NM_001358369, exon 1 of 7) 207 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-47 chr8 91136223 91136471 + 1.49151883326344 NA promoter-TSS (NM_010241) promoter-TSS (NM_010241) -853 NM_010241 14339 Mm.324588 NM_010241 ENSMUSG00000031667 Aktip AL023020|Fif|Ft|Ft1|Fts thymoma viral proto-oncogene 1 interacting protein protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-40 chr6 140625333 140625608 + 1.49151883326344 NA intron (NM_001309437, intron 1 of 8) intron (NM_001309437, intron 1 of 8) 561 NM_001309437 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-48 chr9 111095018 111095241 + 1.49151883326344 NA Intergenic Intergenic -22982 NM_027742 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-21 chr15 79804544 79804822 + 1.49151883326344 NA promoter-TSS (NM_030689) promoter-TSS (NM_030689) 26 NM_030689 73340 Mm.38438 NM_030689 ENSMUSG00000022421 Nptxr 1200009K17Rik|1700036C17Rik|5730406O18Rik|AI452369|AI785356|D15Bwg0580e|NPR|Npcd neuronal pentraxin receptor protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-17 chr13 53230957 53231410 + 1.49151883326344 NA intron (NM_013846, intron 1 of 8) intron (NM_013846, intron 1 of 8) 54926 NM_013846 26564 Mm.342774 NM_013846 ENSMUSG00000021464 Ror2 Ntrkr2 receptor tyrosine kinase-like orphan receptor 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-33 chr3 19203266 19203635 + 1.49151883326344 NA intron (NM_001356295, intron 2 of 7) intron (NM_001356295, intron 2 of 7) 15155 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-14 chr14 57758237 57758517 + 1.49151883326344 NA Intergenic Intergenic -12254 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-24 chr17 84153802 84154187 + 1.49151883326344 NA Intergenic Intergenic 33953 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-36 chr5 144901120 144901400 + 1.49151883326344 NA exon (NM_029438, exon 3 of 18) exon (NM_029438, exon 3 of 18) -4444 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-30 chr4 62967438 62967726 + 1.49151883326344 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 2008 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-22 chr17 5050032 5050318 + 1.49151883326344 NA intron (NM_001085355, intron 2 of 19) intron (NM_001085355, intron 2 of 19) 55101 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-49 chr9 62118738 62119229 + 1.49151883326344 NA Intergenic Intergenic 3611 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-27 chr3 95856032 95856262 + 1.49151883326344 NA promoter-TSS (NM_027541) promoter-TSS (NM_027541) -262 NR_151629 70767 Mm.279872 NM_027541 ENSMUSG00000015748 Prpf3 3632413F13Rik pre-mRNA processing factor 3 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-45 chr8 44994708 44994910 + 1.49151883326344 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 44601 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-32 chr2 167713395 167713599 + 1.49151883326344 NA Intergenic Intergenic 22320 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-39 chr6 17501934 17502243 + 1.49151883326344 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 38131 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-16 chr13 43684954 43685212 + 1.49151883326344 NA Intergenic Intergenic -31708 NR_046022 622552 Mm.375036 NR_046022 ENSMUSG00000110016 Gm20751 - predicted gene, 20751 ncRNA common_peak2_19_6_1.24234202091407_3.42852593251464_1.49151883326344 chr15 76510780 76510990 + 1.49151883326344 NA intron (NM_010046, intron 1 of 16) intron (NM_010046, intron 1 of 16) 1109 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-41 chr7 25268416 25268673 + 1.49151883326344 NA intron (NM_001302811, intron 1 of 20) CpG 845 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-49 chr9 111473425 111473640 + 1.49151883326344 NA intron (NM_172928, intron 2 of 4) B4A|SINE|B4 34451 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-35 chr5 136918978 136919252 + 1.49151883326344 NA promoter-TSS (NR_015555) promoter-TSS (NR_015555) -31 NR_015555 66752 Mm.135764 NR_015555 ENSMUSG00000097908 4933404O12Rik AW494809 RIKEN cDNA 4933404O12 gene ncRNA unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-11 chr12 82408483 82408879 + 1.49151883326344 NA intron (NM_001167983, intron 13 of 23) intron (NM_001167983, intron 13 of 23) 97332 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-21 chr2 125297155 125297514 + 1.49151883326344 NA Intergenic Intergenic 49819 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-3 chr11 58867311 58867701 + 1.49151883326344 NA intron (NM_172403, intron 1 of 4) intron (NM_172403, intron 1 of 4) 266 NM_172403 69944 Mm.32118 NM_172403 ENSMUSG00000020491 2810021J22Rik AI449137 RIKEN cDNA 2810021J22 gene protein-coding common_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-4 chr5 36726386 36726611 + 1.49151883326344 NA Intergenic Intergenic 22181 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-3 chr17 26123758 26123951 + 1.49151883326344 NA TTS (NM_021793) TTS (NM_021793) 351 NM_024227 68611 Mm.273102 NM_024227 ENSMUSG00000024181 Mrpl28 1110015G04Rik|L28mt|MAAT1|MRP-L28|p15 mitochondrial ribosomal protein L28 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-38 chr6 134669315 134669614 + 1.49151883326344 NA intron (NM_001170479, intron 2 of 3) intron (NM_001170479, intron 2 of 3) 28524 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-6 chr11 117254416 117254672 + 1.49151883326344 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -11702 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-34 chr3 53104686 53104952 + 1.49151883326344 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 63272 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-10 chr12 40221681 40221924 + 1.49151883326344 NA TTS (NR_035459) TTS (NR_035459) 1009 NR_035459 100316693 NR_035459 ENSMUSG00000089371 Mir1938 mir-1938|mmu-mir-1938 microRNA 1938 ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-13 chr11 118215652 118215984 + 1.49151883326344 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -3076 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-9 chr12 24679247 24679609 + 1.49151883326344 NA intron (NM_001004455, intron 1 of 4) intron (NM_001004455, intron 1 of 4) 2367 NM_138686 12879 Mm.52265 NM_138686 ENSMUSG00000062563 Cys1 2900006B19Rik|AV218859|Ccap|ck|cpk cystin 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-29 chr4 57838417 57838730 + 1.49151883326344 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -6675 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-29 chr2 93775946 93776316 + 1.49151883326344 NA intron (NM_001355076, intron 7 of 10) intron (NM_001355076, intron 7 of 10) 46437 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-40 chr6 82119176 82119534 + 1.49151883326344 NA Intergenic Intergenic 77727 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-50 chr9 122140636 122140880 + 1.49151883326344 NA intron (NM_001357775, intron 4 of 7) intron (NM_001357775, intron 4 of 7) 23299 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-31 chr2 137662284 137662572 + 1.49151883326344 NA Intergenic Intergenic -545908 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-46 chr9 65676621 65676812 + 1.49151883326344 NA 5' UTR (NM_010952, exon 1 of 5) 5' UTR (NM_010952, exon 1 of 5) 168 NM_001301307 18247 Mm.116749 NM_010952 ENSMUSG00000040652 Oaz2 AZ-2|AZ2|Oaz2-ps|Sez15 ornithine decarboxylase antizyme 2 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-26 chr3 83898900 83899269 + 1.49151883326344 NA intron (NM_172681, intron 34 of 34) intron (NM_172681, intron 34 of 34) -57476 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-37 chr3 142345261 142345453 + 1.49151883326344 NA intron (NM_001190857, intron 2 of 7) intron (NM_001190857, intron 2 of 7) 46493 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-5 chr10 62487082 62487438 + 1.49151883326344 NA promoter-TSS (NM_133672) promoter-TSS (NM_133672) -455 NM_001358543 30930 Mm.260703 NM_133672 ENSMUSG00000020078 Vps26a AA407240|HB58|Vps26 VPS26 retromer complex component A protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-32 chr4 107491455 107491802 + 1.49151883326344 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 56909 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-20 chr15 78803705 78803973 + 1.49151883326344 NA promoter-TSS (NM_130859) promoter-TSS (NM_130859) -797 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-18 chr16 85061381 85061647 + 1.49151883326344 NA intron (NM_001198825, intron 5 of 15) intron (NM_001198825, intron 5 of 15) 89303 NR_045889 100038614 Mm.441351 NR_045889 ENSMUSG00000115518 Gm10791 - predicted gene 10791 ncRNA unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-23 chr2 153344430 153344830 + 1.49151883326344 NA intron (NR_040318, intron 1 of 1) intron (NR_040318, intron 1 of 1) 1180 NR_040318 72326 Mm.400102 NR_040318 ENSMUSG00000073236 2500004C02Rik - RIKEN cDNA 2500004C02 gene ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-14 chr12 27468639 27468930 + 1.49151883326344 NA Intergenic Intergenic -126066 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-30 chr2 122610829 122611101 + 1.49151883326344 NA intron (NM_025961, intron 1 of 8) intron (NM_025961, intron 1 of 8) 312 NM_025961 67092 Mm.29975 NM_025961 ENSMUSG00000027199 Gatm 1810003P21Rik|AI314789|AT glycine amidinotransferase (L-arginine:glycine amidinotransferase) protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-27 chr2 4476978 4477223 + 1.49151883326344 NA intron (NM_001177843, intron 3 of 23) intron (NM_001177843, intron 3 of 23) 76124 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-37 chr6 83120962 83121410 + 1.49151883326344 NA TTS (NM_023547) TTS (NM_023547) 275 NM_001083923 22377 Mm.1109 NM_016757 ENSMUSG00000030035 Wbp1 AI255152 WW domain binding protein 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-9 chr11 67861721 67861989 + 1.49151883326344 NA intron (NM_173754, intron 14 of 14) intron (NM_173754, intron 14 of 14) 60298 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-31 chr4 64098798 64099225 + 1.49151883326344 NA Intergenic Intergenic -51996 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-4 chr1 161913404 161913880 + 1.49151883326344 NA Intergenic Intergenic -36960 NM_001357402 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-24 chr3 41606343 41606556 + 1.49151883326344 NA intron (NM_001130184, intron 9 of 10) intron (NM_001130184, intron 9 of 10) 41569 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-43 chr6 146886697 146886924 + 1.49151883326344 NA Intergenic Intergenic -1684 NM_001355728 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-4 chr11 80089507 80089779 + 1.49151883326344 NA 5' UTR (NM_001029856, exon 1 of 23) 5' UTR (NM_001029856, exon 1 of 23) 243 NM_001029856 237877 Mm.89551 NM_001029856 ENSMUSG00000017550 Atad5 C130052G03Rik|FRAG1|Gm17 ATPase family, AAA domain containing 5 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344 chr1 72123090 72123355 + 1.49151883326344 NA Intergenic Intergenic 89085 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344 chr10 99267740 99267946 + 1.49151883326344 NA TTS (NM_026268) TTS (NM_026268) 4612 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-12 chr12 102307987 102308372 + 1.49151883326344 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 24538 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-28 chr2 28131721 28131964 + 1.49151883326344 NA Intergenic Intergenic -46964 NM_010190 14134 Mm.182935 NM_010190 ENSMUSG00000026835 Fcnb Fcn2 ficolin B protein-coding common_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-2 chr5 33218581 33218842 + 1.49151883326344 NA promoter-TSS (NM_133903) promoter-TSS (NM_133903) -473 NM_133903 100689 Mm.34694 NM_133903 ENSMUSG00000037379 Spon2 2310045I24Rik|AI504350|M-spondin|Mindin|Mspondin spondin 2, extracellular matrix protein protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-44 chr9 43264078 43264360 + 1.49151883326344 NA intron (NM_001243261, intron 1 of 2) intron (NM_001243261, intron 1 of 2) 4340 NM_001243261 235302 Mm.135745 NM_001243261 D630033O11Rik Gm588 RIKEN cDNA D630033O11 gene protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-8 chr10 108185861 108186060 + 1.49151883326344 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 23560 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-11 chr11 94940943 94941472 + 1.49151883326344 NA intron (NM_007742, intron 12 of 50) intron (NM_007742, intron 12 of 50) 4983 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-22 chr2 132686775 132687114 + 1.49151883326344 NA promoter-TSS (NM_001358260) promoter-TSS (NM_001358260) 13 NM_001358260 73747 Mm.284114 NM_028637 ENSMUSG00000044991 1110034G24Rik - RIKEN cDNA 1110034G24 gene protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-46 chr8 46500734 46501031 + 1.49151883326344 NA intron (NM_001302163, intron 2 of 20) intron (NM_001302163, intron 2 of 20) 9916 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-3 chr1 155240131 155240404 + 1.49151883326344 NA Intergenic Intergenic 81564 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-25 chr19 10565434 10565715 + 1.49151883326344 NA Intergenic Intergenic -9336 NM_026798 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-39 chr6 136809385 136809807 + 1.49151883326344 NA 3' UTR (NM_177688, exon 1 of 1) 3' UTR (NM_177688, exon 1 of 1) 1348 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-42 chr6 145713197 145713625 + 1.49151883326344 NA Intergenic Intergenic -94972 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-7 chr11 117350405 117350642 + 1.49151883326344 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 18210 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-35 chr3 123122082 123122330 + 1.49151883326344 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) -87219 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-7 chr10 80051576 80051801 + 1.49151883326344 NA intron (NR_110342, intron 2 of 6) intron (NR_110342, intron 2 of 6) -1800 NM_008162 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-41 chr6 112258707 112258953 + 1.49151883326344 NA Intergenic Intergenic -14928 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-10 chr11 83849882 83850141 + 1.49151883326344 NA promoter-TSS (NM_001291268) promoter-TSS (NM_001291268) -858 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344 chr15 4026069 4026314 + 1.49151883326344 NA promoter-TSS (NM_024188) promoter-TSS (NM_024188) -237 NM_024188 67041 Mm.13445 NM_024188 ENSMUSG00000022186 Oxct1 2610008O03Rik|Oxct|Oxct2a|Scot-s 3-oxoacid CoA transferase 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-17 chr16 33860186 33860469 + 1.49151883326344 NA intron (NM_001145884, intron 2 of 14) intron (NM_001145884, intron 2 of 14) 30662 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-45 chr9 65021927 65022130 + 1.49151883326344 NA promoter-TSS (NM_021345) promoter-TSS (NM_021345) -311 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-36 chr3 138741858 138742094 + 1.49151883326344 NA promoter-TSS (NM_019571) promoter-TSS (NM_019571) -232 NR_121195 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-48 chr8 121904967 121905302 + 1.49151883326344 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 2552 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-44 chr7 37851835 37852237 + 1.49151883326344 NA Intergenic Intergenic -82284 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-33 chr5 112319799 112320115 + 1.49151883326344 NA Intergenic Intergenic -6412 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-15 chr15 86172741 86173006 + 1.49151883326344 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) -12855 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-19 chr15 61538500 61538741 + 1.49151883326344 NA Intergenic Intergenic 235831 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-23 chr17 66990326 66990624 + 1.49151883326344 NA intron (NM_001357625, intron 7 of 32) intron (NM_001357625, intron 7 of 32) 35760 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-38 chr4 57735236 57735521 + 1.49151883326344 NA intron (NM_001304544, intron 5 of 8) intron (NM_001304544, intron 5 of 8) -109870 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-15 chr13 38449035 38449401 + 1.49151883326344 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 12575 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-42 chr8 33793232 33793442 + 1.49151883326344 NA intron (NM_019733, intron 7 of 8) intron (NM_019733, intron 7 of 8) -45567 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-19 chr2 5615445 5615914 + 1.49151883326344 NA intron (NM_001290374, intron 1 of 9) intron (NM_001290374, intron 1 of 9) 60367 NM_001290376 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-16 chr16 23322694 23323151 + 1.49151883326344 NA intron (NM_001252505, intron 4 of 7) A-rich|Low_complexity|Low_complexity 32452 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344 chr1 38286698 38287150 + 1.49151883326344 NA intron (NM_001290814, intron 8 of 21) intron (NM_001290814, intron 8 of 21) 154841 NR_151587 329123 Mm.207123 NR_151587 ENSMUSG00000102716 Gm5099 EG329123 predicted gene 5099 ncRNA unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-26 chr19 46457389 46457624 + 1.49151883326344 NA intron (NM_001025391, intron 8 of 11) intron (NM_001025391, intron 8 of 11) -44142 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-34 chr5 134441833 134442233 + 1.49151883326344 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 14229 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-2 chr10 111672671 111672903 + 1.49151883326344 NA Intergenic Intergenic -78514 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_19_6_1.24234202091407_3.42852593251464_1.49151883326344 chr2 34544717 34544931 + 1.49151883326344 NA intron (NM_001290625, intron 7 of 11) intron (NM_001290625, intron 7 of 11) 137973 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding unique_peak1_19_6_1.24234202091407_3.42852593251464_1.49151883326344-20 chr2 54084873 54085107 + 1.49151883326344 NA exon (NM_023396, exon 1 of 1) exon (NM_023396, exon 1 of 1) 562 NM_023396 67874 Mm.27086 NM_023396 ENSMUSG00000075334 Rprm 2410012A13Rik|Reprimo reprimo, TP53 dependent G2 arrest mediator candidate protein-coding unique_peak1_20_6_1.31223475353502_3.46347229882511_1.49151883326344-2 chr1 93326193 93326463 + 1.49151883326344 NA intron (NM_080850, intron 7 of 17) intron (NM_080850, intron 7 of 17) 16460 NM_080850 269224 Mm.379454 NM_080850 ENSMUSG00000026274 Pask mKIAA0135 PAS domain containing serine/threonine kinase protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-8 chr2 35673765 35673985 + 1.49151883326343 NA intron (NM_001290637, intron 3 of 16) intron (NM_001290637, intron 3 of 16) -18119 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-11 chr5 30945229 30945497 + 1.49151883326343 NA promoter-TSS (NM_001160149) promoter-TSS (NM_001160149) 64 NM_001160149 68567 Mm.45127 NM_026770 ENSMUSG00000029161 Cgref1 1110004G24Rik|AW045201|Cgr11 cell growth regulator with EF hand domain 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-9 chr3 37921381 37921681 + 1.49151883326343 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 22718 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-17 chr7 120852041 120852367 + 1.49151883326343 NA intron (NM_001267711, intron 1 of 17) intron (NM_001267711, intron 1 of 17) 1015 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-3 chr2 29124543 29124774 + 1.49151883326343 NA promoter-TSS (NM_198033) promoter-TSS (NM_198033) -334 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-5 chr11 96317958 96318227 + 1.49151883326343 NA promoter-TSS (NM_010459) promoter-TSS (NM_010459) -175 NM_010459 15412 Mm.3546 NM_010459 ENSMUSG00000038692 Hoxb4 Hox-2.6 homeobox B4 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-14 chr6 34621398 34621831 + 1.49151883326343 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 23110 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-6 chr12 106094156 106094381 + 1.49151883326343 NA Intergenic Intergenic 84005 NM_001029843 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-19 chr9 86451586 86451842 + 1.49151883326343 NA intron (NM_027394, intron 2 of 9) intron (NM_027394, intron 2 of 9) 13202 NM_027394 70348 Mm.53469 NM_027394 ENSMUSG00000032415 Ube2cbp 2610018I03Rik|Ube3d ubiquitin-conjugating enzyme E2C binding protein protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-13 chr5 117285873 117286189 + 1.49151883326343 NA intron (NM_018858, intron 2 of 3) ID4_|SINE|ID 1533 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-15 chr7 45052654 45052889 + 1.49151883326343 NA TTS (NM_022999) TTS (NM_022999) 110 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-4 chr11 5860936 5861391 + 1.49151883326343 NA promoter-TSS (NM_001291857) promoter-TSS (NM_001291857) -703 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-16 chr7 79392081 79392296 + 1.49151883326343 NA promoter-TSS (NM_145946) promoter-TSS (NM_145946) -150 NM_145946 208836 Mm.349493 NM_145946 ENSMUSG00000039187 Fanci - Fanconi anemia, complementation group I protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-7 chr2 10310054 10310344 + 1.49151883326343 NA Intergenic Intergenic -60252 NM_001198808 353282 Mm.329991 NM_177386 ENSMUSG00000061186 Sfmbt2 D2Wsu23e|D330030P06Rik Scm-like with four mbt domains 2 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-2 chr10 82083403 82083648 + 1.49151883326343 NA Intergenic CpG 35398 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-3 chr11 4423480 4423730 + 1.49151883326343 NA intron (NM_029458, intron 5 of 10) intron (NM_029458, intron 5 of 10) 17477 NM_029458 75828 Mm.159592 NM_029458 ENSMUSG00000020419 Hormad2 4930529M09Rik HORMA domain containing 2 protein-coding common_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343 chr10 60532981 60533341 + 1.49151883326343 NA intron (NM_001252635, intron 8 of 68) intron (NM_001252635, intron 8 of 68) 133435 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-12 chr5 43527549 43527867 + 1.49151883326343 NA intron (NM_001135172, intron 1 of 2) intron (NM_001135172, intron 1 of 2) 12139 NM_001135172 109323 Mm.275553 NM_175425 ENSMUSG00000061535 C1qtnf7 5530401N20Rik|8430425G24Rik|Ctrp7 C1q and tumor necrosis factor related protein 7 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-18 chr8 122165442 122165767 + 1.49151883326343 NA Intergenic B1_Mus1|SINE|Alu -116537 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343 chr10 41612699 41613148 + 1.49151883326343 NA exon (NM_001358562, exon 27 of 48) exon (NM_001358562, exon 27 of 48) 44907 NR_045341 70538 Mm.399807 NR_045341 ENSMUSG00000091370 5730435O14Rik - RIKEN cDNA 5730435O14 gene ncRNA common_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-2 chr17 79742689 79742906 + 1.49151883326343 NA Intergenic Intergenic -27756 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_6_17_-1.6241159485039_3.35786702719036_1.49151883326343-10 chr4 41267591 41267822 + 1.49151883326343 NA intron (NM_026872, intron 1 of 28) intron (NM_026872, intron 1 of 28) 7429 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak2_78_41_0.625250243496516_5.70494254452702_1.49129412527513 chr11 99572598 99573295 + 1.49129412527513 NA Intergenic Intergenic -6316 NM_023511 69473 Mm.158281 NM_023511 ENSMUSG00000047564 Krtap3-1 2310003K17Rik|KAP3.1|KRTAP3.1 keratin associated protein 3-1 protein-coding common_peak1_78_41_0.625250243496516_5.70494254452702_1.49129412527513 chr19 56991667 56992618 + 1.49129412527513 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 16433 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_78_41_0.625250243496516_5.70494254452702_1.49129412527513-2 chr7 35555242 35555905 + 1.49129412527513 NA exon (NM_033080, exon 1 of 3) exon (NM_033080, exon 1 of 3) 355 NM_033080 110959 Mm.410206 NM_033080 ENSMUSG00000034875 Nudt19 D7Rp2|D7Rp2-r|D7Rp2-s|D7Rp2e|RP2-r|RP2-s nudix (nucleoside diphosphate linked moiety X)-type motif 19 protein-coding unique_peak1_78_41_0.625250243496516_5.70494254452702_1.49129412527513 chr17 22360847 22361642 + 1.49129412527513 NA promoter-TSS (NM_001347330) promoter-TSS (NM_001347330) 156 NM_176962 319615 Mm.442162 NM_176962 ENSMUSG00000033972 Zfp944 6330416L07Rik zinc finger protein 944 protein-coding common_peak1_78_41_0.625250243496516_5.70494254452702_1.49129412527513-2 chr9 44880457 44881304 + 1.49129412527513 NA exon (NM_001357549, exon 1 of 36) exon (NM_001357549, exon 1 of 36) 394 NM_001357549 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_54_70_-0.650914818153743_5.82428971042781_1.49065377724493 chr11 68692551 68693464 + 1.49065377724493 NA intron (NM_175260, intron 1 of 40) intron (NM_175260, intron 1 of 40) 1092 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding common_peak2_54_70_-0.650914818153743_5.82428971042781_1.49065377724493-2 chr13 59940423 59941732 + 1.49065377724493 NA Intergenic Intergenic -88634 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_54_70_-0.650914818153743_5.82428971042781_1.49065377724493 chr1 75505732 75506439 + 1.49065377724493 NA promoter-TSS (NM_010564) promoter-TSS (NM_010564) 367 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding common_peak1_54_70_-0.650914818153743_5.82428971042781_1.49065377724493-2 chr11 60219956 60220577 + 1.49065377724493 NA intron (NM_001358315, intron 1 of 18) intron (NM_001358315, intron 1 of 18) 361 NM_011480 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding common_peak1_54_70_-0.650914818153743_5.82428971042781_1.49065377724493-3 chr7 99140285 99141024 + 1.49065377724493 NA intron (NM_178635, intron 1 of 14) CpG 490 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_84_45_0.598870820460073_5.82299736628705_1.49065377724492-3 chr5 124862755 124863605 + 1.49065377724492 NA promoter-TSS (NM_144819) promoter-TSS (NM_144819) 475 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_85_45_0.615625594579176_5.8313747533466_1.49065377724492 chr4 117835762 117836671 + 1.49065377724492 NA intron (NM_008135, intron 1 of 13) CpG 958 NM_008135 14664 Mm.244549 NM_008135 ENSMUSG00000028542 Slc6a9 Glyt-1|Glyt1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding common_peak1_84_45_0.598870820460073_5.82299736628705_1.49065377724492-4 chr9 102761576 102762302 + 1.49065377724492 NA Intergenic Intergenic 22291 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_84_45_0.598870820460073_5.82299736628705_1.49065377724492 chr13 54574763 54576058 + 1.49065377724492 NA intron (NM_019968, intron 1 of 3) CpG 397 NM_019968 56795 Mm.89484 NM_019968 ENSMUSG00000025870 Arl10 Arl10a|Arm1 ADP-ribosylation factor-like 10 protein-coding common_peak1_84_45_0.598870820460073_5.82299736628705_1.49065377724492-2 chr19 18811598 18812213 + 1.49065377724492 NA intron (NM_153417, intron 15 of 38) intron (NM_153417, intron 15 of 38) 61922 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_175_107_0.410177941287104_6.95997647280702_1.48971788961607 chr16 8830151 8831232 + 1.48971788961607 NA intron (NM_001081400, intron 1 of 3) CpG 591 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_176_107_0.418294205813421_6.96403460507018_1.48971788961607 chr13 24800871 24802458 + 1.48971788961607 NA promoter-TSS (NM_024473) promoter-TSS (NM_024473) 7 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding common_peak1_56_27_0.742644134714998_5.1786769894151_1.48952336997771-4 chr7 92561266 92562197 + 1.48952336997771 NA intron (NM_025515, intron 1 of 8) CpG 582 NM_001162918 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding common_peak2_32_47_-0.817896516323398_5.17601424255946_1.48952336997771 chr2 30692447 30693067 + 1.48952336997771 NA Intergenic Intergenic -14746 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak1_56_27_0.742644134714998_5.1786769894151_1.48952336997771-3 chr4 137643980 137644621 + 1.48952336997771 NA intron (NM_001355588, intron 22 of 26) intron (NM_001355588, intron 22 of 26) -20426 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding common_peak1_56_27_0.742644134714998_5.1786769894151_1.48952336997771 chr14 45492439 45492974 + 1.48952336997771 NA intron (NM_146054, intron 3 of 14) intron (NM_146054, intron 3 of 14) 37359 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_56_27_0.742644134714998_5.1786769894151_1.48952336997771-2 chr4 55532739 55533211 + 1.48952336997771 NA promoter-TSS (NM_010637) promoter-TSS (NM_010637) -500 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak2_56_27_0.742644134714998_5.1786769894151_1.48952336997771 chr7 127841015 127841422 + 1.48952336997771 NA promoter-TSS (NM_009294) promoter-TSS (NM_009294) -590 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding unique_peak1_56_27_0.742644134714998_5.1786769894151_1.48952336997771 chr1 105424233 105424980 + 1.48952336997771 NA Intergenic Intergenic -67896 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_32_47_-0.817896516323398_5.17601424255946_1.48952336997771 chr13 5802959 5803439 + 1.48952336997771 NA Intergenic Intergenic 54893 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_158_95_0.434588177202915_6.80225658932261_1.48809074733253 chr1 134560084 134561201 + 1.48809074733253 NA intron (NM_152895, intron 1 of 26) CpG 464 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak2_28_43_-0.877463617686787_5.0206998097939_1.48724131519613-2 chr17 57010968 57011262 + 1.48724131519613 NA exon (NM_133801, exon 1 of 13) exon (NM_133801, exon 1 of 13) 173 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak2_28_43_-0.877463617686787_5.0206998097939_1.48724131519613 chr15 80977803 80978140 + 1.48724131519613 NA intron (NM_001357669, intron 1 of 20) CpG 206 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding common_peak2_28_43_-0.877463617686787_5.0206998097939_1.48724131519613-3 chr4 83917426 83918215 + 1.48724131519613 NA Intergenic Intergenic 127059 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612-4 chr5 24444720 24445159 + 1.48724131519612 NA TTS (NM_022418) TTS (NM_022418) 296 NM_023229 66587 Mm.28123 NM_023229 ENSMUSG00000028959 Fastk 0610011K02Rik|610011K02Rik Fas-activated serine/threonine kinase protein-coding common_peak2_51_24_0.774627005107145_5.0311696923283_1.48724131519612 chr13 75840442 75840877 + 1.48724131519612 NA intron (NM_053108, intron 1 of 2) intron (NM_053108, intron 1 of 2) 773 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612-3 chr15 83592983 83593320 + 1.48724131519612 NA intron (NM_183017, intron 1 of 13) intron (NM_183017, intron 1 of 13) 2006 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding unique_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612 chr11 12234094 12234864 + 1.48724131519612 NA Intergenic Intergenic 177661 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612 chr11 60108869 60109568 + 1.48724131519612 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 4205 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding unique_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612-3 chr8 121636043 121636522 + 1.48724131519612 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 15651 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612-2 chr13 30973416 30974046 + 1.48724131519612 NA intron (NM_025588, intron 1 of 27) intron (NM_025588, intron 1 of 27) 316 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding unique_peak1_51_24_0.774627005107145_5.0311696923283_1.48724131519612-2 chr3 55599734 55600267 + 1.48724131519612 NA Intergenic Intergenic 138272 NM_001357476 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding common_peak2_155_167_-0.400053605242681_7.19229062015742_1.48645682275316 chr15 59679118 59680642 + 1.48645682275316 NA Intergenic Intergenic 31226 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_112_63_0.530322701660252_6.26516135083013_1.48620083855261 chr2 165881973 165883567 + 1.48620083855261 NA promoter-TSS (NM_001281926) promoter-TSS (NM_001281926) -492 NM_001281926 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_88_104_-0.525938291266195_6.45127637203302_1.48610715801529 chr19 7494120 7495312 + 1.48610715801529 NA intron (NM_146091, intron 1 of 12) CpG 278 NM_146091 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding common_peak1_126_73_0.488186255944965_6.45354649360143_1.48610715801529 chr2 113373957 113375747 + 1.48610715801529 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 47116 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_119_68_0.507898129274472_6.3624735214154_1.48482814312427 chr14 66258221 66259066 + 1.48482814312427 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 22409 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_119_68_0.507898129274472_6.3624735214154_1.48482814312427-3 chr3 58371576 58372490 + 1.48482814312427 NA Intergenic Intergenic -42687 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_119_68_0.507898129274472_6.3624735214154_1.48482814312427-2 chr2 130423708 130424859 + 1.48482814312427 NA promoter-TSS (NM_030559) promoter-TSS (NM_030559) 5 NM_178762 319513 Mm.482539 NM_178762 ENSMUSG00000037773 Pced1a A930025D01Rik|AI480484|Fam113a PC-esterase domain containing 1A protein-coding common_peak1_138_152_-0.430410791309566_7.04218244703787_1.48387191838246 chr15 53687585 53689207 + 1.48387191838246 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -74117 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_186_114_0.406421185198098_7.04870064354342_1.48387191838246 chr18 84684326 84685602 + 1.48387191838246 NA intron (NM_023149, intron 1 of 11) intron (NM_023149, intron 1 of 11) 738 NM_023149 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_142_84_0.458227617123431_6.63850474469942_1.48285743610495 chr1 59762189 59763300 + 1.48285743610495 NA Intergenic Intergenic -1535 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak2_38_16_0.91891093543223_4.54691830896645_1.48160942223867-2 chr7 109544456 109544751 + 1.48160942223867 NA intron (NM_001001326, intron 5 of 19) intron (NM_001001326, intron 5 of 19) 24471 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_38_16_0.91891093543223_4.54691830896645_1.48160942223867 chr17 87840798 87841211 + 1.48160942223867 NA Intergenic Intergenic -43010 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-3 chr4 58186207 58186781 + 1.48160942223867 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 20102 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-5 chr3 103987542 103988035 + 1.48160942223867 NA intron (NM_013629, intron 7 of 18) intron (NM_013629, intron 7 of 18) -19472 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak1_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-2 chr9 34985940 34986215 + 1.48160942223867 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -130651 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-4 chr8 67279072 67279382 + 1.48160942223867 NA Intergenic Intergenic -211531 NM_008673 17960 Mm.14125 NM_008673 ENSMUSG00000025588 Nat1 Nat-1 N-acetyl transferase 1 protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-2 chr12 111457793 111458451 + 1.48160942223867 NA Intergenic Intergenic 15461 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-2 chr12 13269185 13269530 + 1.48160942223867 NA intron (NM_027706, intron 1 of 51) intron (NM_027706, intron 1 of 51) 230 NM_027706 71169 Mm.177520 NM_027706 ENSMUSG00000020576 Nbas 4933425L03Rik|Nag neuroblastoma amplified sequence protein-coding common_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-3 chr17 87840809 87841216 + 1.48160942223867 NA Intergenic Intergenic -43018 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867 chr19 45559847 45560441 + 1.48160942223867 NA promoter-TSS (NM_001356947) promoter-TSS (NM_001356947) 420 NM_001330506 56626 Mm.46509 NM_020032 ENSMUSG00000025218 Poll 1110003P06Rik|AV007317 polymerase (DNA directed), lambda protein-coding common_peak1_18_32_-1.06817568524006_4.51030627673842_1.48160942223867 chr2 102944553 102944819 + 1.48160942223867 NA Intergenic Intergenic -43021 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-6 chrX 60404189 60404629 + 1.48160942223867 NA promoter-TSS (NM_001001798) promoter-TSS (NM_001001798) -404 NM_001037863 320940 Mm.490394 NM_001001798 ENSMUSG00000062949 Atp11c A330005H02Rik|AI315324|Ig ATPase, class VI, type 11C protein-coding common_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867 chr11 87462051 87462275 + 1.48160942223867 NA intron (NM_001199293, intron 2 of 30) CpG 34572 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-4 chr4 127327596 127328091 + 1.48160942223867 NA intron (NM_001160012, intron 1 of 1) ID_B1|SINE|B4 1282 NM_008126 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-5 chr9 109832568 109832935 + 1.48160942223867 NA promoter-TSS (NM_018757) promoter-TSS (NM_018757) -43 NM_018757 54369 Mm.12951 NM_018757 ENSMUSG00000032478 Nme6 nm23-M6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding common_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867 chr15 10791068 10791427 + 1.48160942223867 NA Intergenic Intergenic -37804 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-2 chr17 87459967 87460260 + 1.48160942223867 NA Intergenic Intergenic -13178 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-4 chr18 39380754 39381088 + 1.48160942223867 NA Intergenic Intergenic 106324 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-7 chr9 70290402 70290759 + 1.48160942223867 NA intron (NM_181072, intron 2 of 27) intron (NM_181072, intron 2 of 27) 83230 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-3 chr16 4647349 4647957 + 1.48160942223867 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 7708 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding unique_peak2_18_32_-1.06817568524006_4.51030627673842_1.48160942223867-2 chr4 114335652 114336258 + 1.48160942223867 NA Intergenic Intergenic -70769 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867-6 chr8 18698819 18699218 + 1.48160942223867 NA intron (NM_007426, intron 6 of 8) intron (NM_007426, intron 6 of 8) 42544 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_38_16_0.91891093543223_4.54691830896645_1.48160942223867 chr12 53146761 53147276 + 1.48160942223867 NA intron (NM_198111, intron 13 of 13) intron (NM_198111, intron 13 of 13) -101659 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak1_98_54_0.559486893527309_6.06110316028831_1.48157022308656-2 chr4 129247272 129248279 + 1.48157022308656 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) 668 NM_001033189 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak1_98_54_0.559486893527309_6.06110316028831_1.48157022308656-4 chr9 107296837 107297966 + 1.48157022308656 NA intron (NM_001317354, intron 1 of 1) intron (NM_001317354, intron 1 of 1) 742 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak1_98_54_0.559486893527309_6.06110316028831_1.48157022308656 chr11 61853888 61855023 + 1.48157022308656 NA intron (NM_013881, intron 1 of 26) CpG 637 NM_013881 29869 Mm.162025 NM_013881 ENSMUSG00000004798 Ulk2 A830085I22Rik|AU015340|Unc51.2|mKIAA0623 unc-51 like kinase 2 protein-coding common_peak1_65_81_-0.597540999793569_6.0587815047213_1.48157022308656 chr18 23954321 23955069 + 1.48157022308656 NA promoter-TSS (NM_027007) promoter-TSS (NM_027007) 7 NM_027007 69256 Mm.218343 NM_027007 ENSMUSG00000024276 Zfp397 2810411K16Rik|6720480F11Rik|AI461664 zinc finger protein 397 protein-coding common_peak1_98_54_0.559486893527309_6.06110316028831_1.48157022308656-3 chr8 126422487 126423502 + 1.48157022308656 NA intron (NM_174987, intron 1 of 1) intron (NM_174987, intron 1 of 1) 493 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak2_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-4 chr17 29458918 29459556 + 1.48071644766697 NA Intergenic B1_Mus2|SINE|Alu -31808 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_67_34_0.673492860818241_5.46602944735409_1.48071644766697 chr14 25527680 25528229 + 1.48071644766697 NA intron (NM_183208, intron 2 of 23) MIRb|SINE|MIR -6485 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-2 chr11 6547226 6547707 + 1.48071644766697 NA intron (NM_001190343, intron 1 of 8) intron (NM_001190343, intron 1 of 8) 579 NM_001190343 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding common_peak2_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-5 chr6 127330425 127331023 + 1.48071644766697 NA Intergenic Intergenic -22757 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_40_56_-0.754875466991059_5.45545228066921_1.48071644766697 chr15 5244567 5245009 + 1.48071644766697 NA promoter-TSS (NM_008965) promoter-TSS (NM_008965) -601 NM_008965 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-3 chr16 33966498 33967203 + 1.48071644766697 NA exon (NM_009471, exon 1 of 6) exon (NM_009471, exon 1 of 6) 188 NM_001348087 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding common_peak2_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-6 chr8 120906858 120907642 + 1.48071644766697 NA Intergenic Intergenic 168611 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_67_34_0.673492860818241_5.46602944735409_1.48071644766697 chr10 80676737 80677185 + 1.48071644766697 NA promoter-TSS (NM_021462) promoter-TSS (NM_021462) -668 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_40_56_-0.754875466991059_5.45545228066921_1.48071644766697 chr10 111583008 111583996 + 1.48071644766697 NA Intergenic Intergenic 10771 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-3 chrX 103481817 103482432 + 1.48071644766697 NA non-coding (NR_001570, exon 1 of 8) non-coding (NR_001570, exon 1 of 8) 1109 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA common_peak1_67_34_0.673492860818241_5.46602944735409_1.48071644766697-3 chr5 24576617 24577245 + 1.48071644766697 NA intron (NM_013853, intron 1 of 13) CpG 415 NM_001359205 27407 Mm.21629 NM_013853 ENSMUSG00000028953 Abcf2 0710005O05Rik|Drr3|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 protein-coding common_peak1_67_34_0.673492860818241_5.46602944735409_1.48071644766697-2 chr17 46772828 46773459 + 1.48071644766697 NA TTS (NM_025433) TTS (NM_025433) 508 NM_025966 67101 Mm.358702 NM_025966 ENSMUSG00000062619 2310039H08Rik - RIKEN cDNA 2310039H08 gene protein-coding common_peak1_40_56_-0.754875466991059_5.45545228066921_1.48071644766697-2 chr8 120906865 120907630 + 1.48071644766697 NA Intergenic Intergenic 168608 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_302_197_0.313921901832015_7.78631757099562_1.48035025925295 chr19 10099421 10101686 + 1.48035025925295 NA intron (NM_019699, intron 1 of 11) intron (NM_019699, intron 1 of 11) 950 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_156_168_-0.399462125257778_7.20114837365329_1.47839768362865 chr19 5637097 5638431 + 1.47839768362865 NA 5' UTR (NM_009045, exon 1 of 11) 5' UTR (NM_009045, exon 1 of 11) 274 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak1_168_102_0.420425818362724_6.89671343636458_1.47806238732019 chr14 99298783 99300451 + 1.47806238732019 NA intron (NM_009769, intron 1 of 3) intron (NM_009769, intron 1 of 3) 926 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-37 chr5 99202979 99203181 + 1.477227296591 NA Intergenic Intergenic 49847 NM_181318 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-53 chr4 130270605 130270835 + 1.477227296591 NA 5' UTR (NM_001356465, exon 1 of 10) 5' UTR (NM_001356465, exon 1 of 10) 714 NM_001356465 230779 Mm.45132 NM_172702 ENSMUSG00000023232 Serinc2 2310004K20Rik|AW121759|FKSG84|TDE2|Tde2l serine incorporator 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-27 chr14 11932030 11932354 + 1.477227296591 NA intron (NM_008981, intron 2 of 29) intron (NM_008981, intron 2 of 29) -257751 NM_001347593 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-12 chr10 108361381 108361582 + 1.477227296591 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 29292 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-47 chr2 72292446 72292754 + 1.477227296591 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 6899 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-37 chr17 65940895 65941083 + 1.477227296591 NA intron (NM_023053, intron 2 of 4) intron (NM_023053, intron 2 of 4) 10198 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-32 chr16 23500015 23500210 + 1.477227296591 NA intron (NM_001359083, intron 2 of 10) intron (NM_001359083, intron 2 of 10) 20703 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-49 chr8 121573716 121573965 + 1.477227296591 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 4966 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-17 chr11 59656760 59656960 + 1.477227296591 NA Intergenic Intergenic -5635 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-52 chrX 164015402 164015805 + 1.477227296591 NA intron (NM_181315, intron 1 of 7) B2_Mm2|SINE|B2 12407 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-28 chr2 38530299 38530601 + 1.477227296591 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 18574 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-13 chr13 99152010 99152247 + 1.477227296591 NA Intergenic Intergenic -32695 NM_001004149 238803 Mm.343207 NM_001004149 ENSMUSG00000050919 Zfp366 DC-SCRIPT|Znf366 zinc finger protein 366 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-2 chr1 64800189 64800522 + 1.477227296591 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -62605 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-64 chr7 101834145 101834444 + 1.477227296591 NA intron (NM_010567, intron 2 of 28) intron (NM_010567, intron 2 of 28) 3530 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-50 chrX 19168693 19168983 + 1.477227296591 NA Intergenic Intergenic -21867 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-44 chr7 110985586 110985838 + 1.477227296591 NA Intergenic Intergenic -3251 NM_194464 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-6 chr10 96631378 96631612 + 1.477227296591 NA Intergenic Intergenic 14494 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-31 chr2 163825270 163825538 + 1.477227296591 NA intron (NM_016873, intron 3 of 4) intron (NM_016873, intron 3 of 4) 4570 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-27 chr2 27317645 27317870 + 1.477227296591 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -70454 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-52 chr4 128962657 128962870 + 1.477227296591 NA promoter-TSS (NM_172875) promoter-TSS (NM_172875) -308 NM_001301841 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-61 chr6 113024029 113024276 + 1.477227296591 NA Intergenic Intergenic -22150 NM_001355266 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-48 chr8 111054131 111054359 + 1.477227296591 NA intron (NM_146217, intron 19 of 20) intron (NM_146217, intron 19 of 20) -2094 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-13 chr11 4637290 4637496 + 1.477227296591 NA promoter-TSS (NM_029291) promoter-TSS (NM_029291) -400 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-9 chr12 35266373 35266695 + 1.477227296591 NA Intergenic Intergenic -71637 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-14 chr14 8097789 8097998 + 1.477227296591 NA promoter-TSS (NM_178279) promoter-TSS (NM_178279) -318 NM_145458 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-31 chr16 23261833 23262116 + 1.477227296591 NA intron (NM_001252505, intron 2 of 7) intron (NM_001252505, intron 2 of 7) -28496 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-49 chr2 126036542 126036737 + 1.477227296591 NA intron (NM_008008, intron 2 of 3) intron (NM_008008, intron 2 of 3) 1981 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-20 chr12 25111777 25111989 + 1.477227296591 NA Intergenic ID4|SINE|ID -15791 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-24 chr13 23555815 23556049 + 1.477227296591 NA TTS (NM_145713) TTS (NM_145713) 900 NM_145713 14957 Mm.247046 NM_145713 ENSMUSG00000052565 Hist1h1d H1.3|H1D|H1f3|H1s-4 histone cluster 1, H1d protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-19 chr12 4232791 4233036 + 1.477227296591 NA intron (NM_134046, intron 2 of 6) intron (NM_134046, intron 2 of 6) 1052 NM_134046 52504 Mm.70546 NM_134046 ENSMUSG00000020652 Cenpo 2810429O05Rik|8430427C03Rik|D12Ertd482e centromere protein O protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-7 chr11 58959281 58959498 + 1.477227296591 NA Intergenic Intergenic -2322 NM_001318003 382523 NM_001318003 Gm12260 H3t predicted gene 12260 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-29 chr15 83387500 83387711 + 1.477227296591 NA intron (NM_001358643, intron 5 of 9) intron (NM_001358643, intron 5 of 9) -20308 NR_027980 69291 Mm.66794 NM_001033147 1700001L05Rik - RIKEN cDNA 1700001L05 gene ncRNA unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-40 chr6 17500461 17500692 + 1.477227296591 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 36619 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-33 chr3 93523481 93523713 + 1.477227296591 NA intron (NM_016740, intron 1 of 2) intron (NM_016740, intron 1 of 2) 3101 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-4 chr1 132151696 132151982 + 1.477227296591 NA Intergenic Intergenic -12154 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-21 chr17 6811534 6811754 + 1.477227296591 NA Intergenic Intergenic -28864 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_12_5_0.847630653307202_3.00877782737476_1.477227296591 chr4 45499367 45499603 + 1.477227296591 NA intron (NM_001033306, intron 1 of 5) B1_Mur4|SINE|Alu 31343 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-2 chr18 38630922 38631125 + 1.477227296591 NA Intergenic Intergenic -29755 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-2 chr5 136633064 136633363 + 1.477227296591 NA Intergenic Intergenic -59933 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-55 chr5 53589527 53589760 + 1.477227296591 NA promoter-TSS (NM_001277116) promoter-TSS (NM_001277116) -703 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-15 chr14 28317861 28318214 + 1.477227296591 NA intron (NM_001347497, intron 19 of 19) intron (NM_001347497, intron 19 of 19) -187436 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-54 chr5 34530945 34531143 + 1.477227296591 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 5260 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-26 chr13 104519001 104519193 + 1.477227296591 NA Intergenic Intergenic 231262 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-16 chr15 11845658 11845871 + 1.477227296591 NA intron (NM_001039181, intron 7 of 7) intron (NM_001039181, intron 7 of 7) 59910 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-33 chr16 94451626 94451818 + 1.477227296591 NA intron (NM_009441, intron 36 of 45) intron (NM_009441, intron 36 of 45) 74907 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-9 chr10 69537030 69537232 + 1.477227296591 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 3423 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-20 chr17 4945605 4945904 + 1.477227296591 NA Intergenic Intergenic -49320 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-50 chr2 165663967 165664190 + 1.477227296591 NA intron (NM_010165, intron 1 of 15) intron (NM_010165, intron 1 of 15) 8780 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-15 chr11 51062797 51063039 + 1.477227296591 NA intron (NM_009329, intron 4 of 4) intron (NM_009329, intron 4 of 4) 3661 NM_001347495 21408 Mm.4792 NM_009329 ENSMUSG00000020364 Zfp354a AW488485|Tcf17|Znf354a|kid1 zinc finger protein 354A protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-11 chr13 15625297 15625559 + 1.477227296591 NA intron (NM_008130, intron 4 of 14) intron (NM_008130, intron 4 of 14) 161705 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-34 chr17 25570478 25570731 + 1.477227296591 NA promoter-TSS (NR_045176) promoter-TSS (NR_045176) 82 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-41 chr18 82534736 82534975 + 1.477227296591 NA intron (NM_001025245, intron 3 of 3) intron (NM_001025245, intron 3 of 3) -19608 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-29 chr2 51274132 51274436 + 1.477227296591 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 32453 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-51 chrX 37190815 37191019 + 1.477227296591 NA promoter-TSS (NM_153503) promoter-TSS (NM_153503) -305 NM_153503 69942 Mm.307182 NM_153503 ENSMUSG00000036537 Rnf113a1 2810428C21Rik|Rnf113a ring finger protein 113A1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-39 chr18 10531245 10531552 + 1.477227296591 NA intron (NM_001083628, intron 18 of 32) intron (NM_001083628, intron 18 of 32) 78954 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591 chr17 46153272 46153474 + 1.477227296591 NA intron (NM_025649, intron 1 of 2) intron (NM_025649, intron 1 of 2) 178 NM_025649 66591 Mm.272024 NM_025649 ENSMUSG00000034509 Mad2l1bp 0610009D16Rik|2510031P20Rik|AU018945|AW550977|C76045|CMT2A|CMT2B|Mad2lbp|mKIAA0110 MAD2L1 binding protein protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-4 chr10 16995615 16995875 + 1.477227296591 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 100037 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-5 chr1 138347365 138347574 + 1.477227296591 NA Intergenic Intergenic 73731 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-5 chr10 19186241 19186458 + 1.477227296591 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 19111 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591 chr1 4785485 4785689 + 1.477227296591 NA non-coding (NR_033530, exon 1 of 4) non-coding (NR_033530, exon 1 of 4) 139 NM_001177658 27395 Mm.182927 NM_025300 ENSMUSG00000033845 Mrpl15 HSPC145|MRP-L7|Rpml7 mitochondrial ribosomal protein L15 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-17 chr15 53210809 53211011 + 1.477227296591 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 135273 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-10 chr12 72070631 72070937 + 1.477227296591 NA exon (NM_181752, exon 1 of 1) exon (NM_181752, exon 1 of 1) 207 NM_181752 238252 Mm.390508 NM_181752 ENSMUSG00000043398 Gpr135 PAFR G protein-coupled receptor 135 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-60 chr6 99469417 99469649 + 1.477227296591 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -34188 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-30 chr2 152569415 152569746 + 1.477227296591 NA Intergenic Intergenic -3164 NM_207276 403172 Mm.84518 NM_207276 ENSMUSG00000056544 Defb21 4930525K10Rik|Gm121 defensin beta 21 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-43 chr19 17876805 17877157 + 1.477227296591 NA Intergenic Intergenic -39349 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-22 chr12 78907529 78907755 + 1.477227296591 NA promoter-TSS (NM_013738) promoter-TSS (NM_013738) -704 NM_013738 27260 Mm.103380 NM_013738 ENSMUSG00000021118 Plek2 - pleckstrin 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-38 chr17 79703231 79703489 + 1.477227296591 NA Intergenic Intergenic 11681 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-35 chr4 11829892 11830188 + 1.477227296591 NA Intergenic Intergenic 71883 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-73 chr9 63656528 63656746 + 1.477227296591 NA intron (NM_016769, intron 5 of 8) intron (NM_016769, intron 5 of 8) 53991 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-21 chr12 27596134 27596364 + 1.477227296591 NA Intergenic Intergenic -253531 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-40 chr18 57780354 57780586 + 1.477227296591 NA promoter-TSS (NR_152224) promoter-TSS (NR_152224) -475 NR_152224 100503033 Mm.381112 NR_152224 Gm19519 - predicted gene, 19519 ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-6 chr1 160900190 160900385 + 1.477227296591 NA Intergenic Intergenic -6124 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-57 chr5 123326151 123326469 + 1.477227296591 NA Intergenic B3|SINE|B2 -18138 NM_029850 77045 Mm.151960 NM_029850 ENSMUSG00000029438 Bcl7a 4432415N06Rik|AI448316 B cell CLL/lymphoma 7A protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-23 chr17 79710139 79710338 + 1.477227296591 NA exon (NM_009994, exon 3 of 3) exon (NM_009994, exon 3 of 3) 4803 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-68 chr8 31597698 31597891 + 1.477227296591 NA Intergenic Intergenic 230045 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-7 chr1 193351869 193352103 + 1.477227296591 NA intron (NM_144817, intron 7 of 12) intron (NM_144817, intron 7 of 12) 18296 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-56 chr5 91274708 91274975 + 1.477227296591 NA intron (NR_040428, intron 3 of 5) intron (NR_040428, intron 3 of 5) 8235 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA common_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-3 chr3 137748589 137748796 + 1.477227296591 NA Intergenic Intergenic 34923 NR_105801 102466638 NR_105801 ENSMUSG00000099011 Mir6380 Gm27356|mmu-mir-6380 microRNA 6380 ncRNA unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-25 chr19 28723179 28723392 + 1.477227296591 NA Intergenic Intergenic -43208 NM_175459 226075 Mm.223508 NM_175459 ENSMUSG00000052942 Glis3 4833409N03Rik|E330013K21Rik GLIS family zinc finger 3 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-23 chr13 13528865 13529107 + 1.477227296591 NA Intergenic B1F1|SINE|Alu -61423 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-41 chr6 70877894 70878115 + 1.477227296591 NA intron (NM_010121, intron 3 of 16) intron (NM_010121, intron 3 of 16) 33489 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-46 chr2 6872863 6873085 + 1.477227296591 NA promoter-TSS (NM_001347094) promoter-TSS (NM_001347094) -939 NM_001347094 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-36 chr17 35796932 35797150 + 1.477227296591 NA Intergenic Intergenic 24591 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-72 chr9 57232102 57232369 + 1.477227296591 NA Intergenic Intergenic -4321 NM_001014398 541610 Mm.378036 NM_001014398 ENSMUSG00000070298 Trcg1 - taste receptor cell gene 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-28 chr15 82166904 82167095 + 1.477227296591 NA intron (NM_033218, intron 1 of 18) intron (NM_033218, intron 1 of 18) 19730 NM_033218 20788 Mm.38016 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-18 chr15 59526017 59526307 + 1.477227296591 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -122492 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-38 chr5 116009133 116009339 + 1.477227296591 NA Intergenic Intergenic 15192 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-43 chr7 25247640 25247976 + 1.477227296591 NA intron (NM_010155, intron 1 of 3) intron (NM_010155, intron 1 of 3) 2950 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-16 chr11 59426379 59426650 + 1.477227296591 NA intron (NM_144521, intron 3 of 4) intron (NM_144521, intron 3 of 4) 23520 NM_001356454 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-22 chr17 13350016 13350215 + 1.477227296591 NA Intergenic Intergenic -4457 NM_001167578 100041352 Mm.432087 NM_001167578 ENSMUSG00000052469 Tcp10c D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c t-complex protein 10c protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-32 chr2 180954877 180955076 + 1.477227296591 NA promoter-TSS (NM_021426) promoter-TSS (NM_021426) -277 NM_021426 58237 Mm.40361 NM_021426 ENSMUSG00000027574 Nkain4 AB030182|C030019F02Rik Na+/K+ transporting ATPase interacting 4 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-3 chr1 89073242 89073443 + 1.477227296591 NA intron (NM_133816, intron 1 of 5) intron (NM_133816, intron 1 of 5) 2927 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-2 chr1 183142866 183143090 + 1.477227296591 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 4579 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-65 chr7 118509328 118509600 + 1.477227296591 NA TTS (NM_001304758) TTS (NM_001304758) -17489 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-8 chr10 43660063 43660304 + 1.477227296591 NA Intergenic Intergenic 66756 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-69 chr8 61584969 61585218 + 1.477227296591 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 6076 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-45 chr19 31743506 31743752 + 1.477227296591 NA intron (NM_001013833, intron 1 of 17) intron (NM_001013833, intron 1 of 17) 21404 NM_001013833 19091 Mm.381170 NM_011160 ENSMUSG00000052920 Prkg1 AW125416|CGKI|Gm19690|Prkg1b|Prkgr1b protein kinase, cGMP-dependent, type I protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591 chr1 86150933 86151296 + 1.477227296591 NA Intergenic MLT1K|LTR|ERVL-MaLR -3666 NM_030184 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-30 chr15 88837988 88838244 + 1.477227296591 NA Intergenic Intergenic 18470 NM_029720 76737 Mm.292567 NM_029720 ENSMUSG00000023272 Creld2 5730592L21Rik|C85758 cysteine-rich with EGF-like domains 2 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-47 chr8 13660786 13661007 + 1.477227296591 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 16691 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-39 chr5 149525140 149525389 + 1.477227296591 NA intron (NR_045423, intron 1 of 4) intron (NR_045423, intron 1 of 4) -3415 NM_029440 381693 Mm.136919 NM_029440 ENSMUSG00000029658 Wdr95 4930434E21Rik WD40 repeat domain 95 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-51 chr3 40684598 40684858 + 1.477227296591 NA intron (NM_175515, intron 8 of 15) intron (NM_175515, intron 8 of 15) -24143 NM_178386 73333 Mm.78691 NM_178386 ENSMUSG00000069041 Slc25a31 1700034J06Rik|Ant4|Sfec solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-19 chr15 59553604 59553865 + 1.477227296591 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -94920 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-26 chr2 13386644 13386916 + 1.477227296591 NA intron (NM_001081084, intron 29 of 66) intron (NM_001081084, intron 29 of 66) 105096 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-71 chr9 47388862 47389055 + 1.477227296591 NA Intergenic Intergenic -141212 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-14 chr11 6274524 6274722 + 1.477227296591 NA intron (NM_134020, intron 1 of 4) intron (NM_134020, intron 1 of 4) 214 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-62 chr6 121039526 121039715 + 1.477227296591 NA intron (NR_138097, intron 3 of 18) intron (NR_138097, intron 3 of 18) -24844 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-10 chr10 95883341 95883600 + 1.477227296591 NA Intergenic Intergenic -57193 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-42 chr19 7498433 7498640 + 1.477227296591 NA intron (NM_146091, intron 1 of 12) intron (NM_146091, intron 1 of 12) 4098 NM_146091 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding unique_peak1_5_11_-1.25997689512942_2.95497405315645_1.477227296591 chr17 5049606 5049804 + 1.477227296591 NA intron (NM_001085355, intron 2 of 19) intron (NM_001085355, intron 2 of 19) 54631 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-66 chr8 12752647 12752837 + 1.477227296591 NA Intergenic B1_Mus1|SINE|Alu -4274 NM_015804 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-35 chr17 25875884 25876072 + 1.477227296591 NA exon (NM_026686, exon 2 of 6) exon (NM_026686, exon 2 of 6) 478 NM_026686 68347 Mm.35098 NM_026686 ENSMUSG00000025731 Mettl26 0610011F06Rik methyltransferase like 26 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-42 chr6 116193713 116193928 + 1.477227296591 NA promoter-TSS (NM_177412) promoter-TSS (NM_177412) -446 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-59 chr6 82882404 82882633 + 1.477227296591 NA promoter-TSS (NR_040520) promoter-TSS (NR_040520) -665 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-75 chr9 123504657 123504932 + 1.477227296591 NA intron (NM_013860, intron 2 of 7) intron (NM_013860, intron 2 of 7) -24959 NM_001357485 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-3 chr1 195130532 195130924 + 1.477227296591 NA intron (NM_013499, intron 1 of 9) intron (NM_013499, intron 1 of 9) 842 NM_001355060 12946 Mm.301652 NM_013499 ENSMUSG00000016481 Cr1l Crry|Mcp|mCRY complement component (3b/4b) receptor 1-like protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-70 chr8 123332924 123333122 + 1.477227296591 NA intron (NM_172287, intron 1 of 14) CpG 310 NM_172287 234857 Mm.150200 NM_172287 ENSMUSG00000010154 Spire2 BC026502|Spir-2|Spir2 spire type actin nucleation factor 2 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-48 chr2 125279903 125280202 + 1.477227296591 NA Intergenic Intergenic 32537 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-36 chr5 77380199 77380419 + 1.477227296591 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 27736 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-46 chr8 11949658 11949882 + 1.477227296591 NA Intergenic Intergenic 109249 NM_029326 75528 Mm.440342 NM_029326 ENSMUSG00000031512 Tex29 1700018L24Rik testis expressed 29 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-44 chr19 18750165 18750384 + 1.477227296591 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 291 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-18 chr11 63921870 63922189 + 1.477227296591 NA 5' UTR (NM_018805, exon 1 of 2) 5' UTR (NM_018805, exon 1 of 2) 255 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-25 chr13 100652495 100652691 + 1.477227296591 NA intron (NM_001015889, intron 1 of 2) intron (NM_001015889, intron 1 of 2) 986 NM_001015889 108143 Mm.301148 NM_027139 ENSMUSG00000052293 Taf9 2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g TATA-box binding protein associated factor 9 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-8 chr12 16849476 16849678 + 1.477227296591 NA Intergenic Intergenic 38612 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-74 chr9 106154841 106155031 + 1.477227296591 NA TTS (NR_029549) TTS (NR_029549) 812 NR_029549 387153 NR_029549 ENSMUSG00000065407 Mir135a-1 Mir135a01|Mirn135|Mirn135a-1|mir-135a-1 microRNA 135a-1 ncRNA common_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591 chr5 30900986 30901217 + 1.477227296591 NA intron (NM_001048192, intron 12 of 16) intron (NM_001048192, intron 12 of 16) 6687 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-12 chr13 59822002 59822286 + 1.477227296591 NA intron (NM_153538, intron 1 of 27) intron (NM_153538, intron 1 of 27) 1003 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-63 chr7 98330395 98330678 + 1.477227296591 NA Intergenic Intergenic -9328 NM_001360615 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca|aPHC alkaline ceramidase 3 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-45 chr7 144611054 144611411 + 1.477227296591 NA intron (NM_001242349, intron 17 of 24) intron (NM_001242349, intron 17 of 24) -28796 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-67 chr8 18595882 18596121 + 1.477227296591 NA intron (NM_173189, intron 1 of 13) intron (NM_173189, intron 1 of 13) 870 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-24 chr19 12518092 12518295 + 1.477227296591 NA Intergenic Intergenic -16197 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding unique_peak2_5_11_-1.25997689512942_2.95497405315645_1.477227296591-34 chr4 11758490 11758773 + 1.477227296591 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 474 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-58 chr5 145115254 145115528 + 1.477227296591 NA intron (NM_023142, intron 1 of 9) intron (NM_023142, intron 1 of 9) 1135 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding unique_peak1_12_5_0.847630653307202_3.00877782737476_1.477227296591-11 chr10 96947446 96947666 + 1.477227296591 NA Intergenic Intergenic -88212 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_96_111_-0.495744367646526_6.55948273823434_1.47693584804675 chr15 40654942 40656422 + 1.47693584804675 NA intron (NM_001356998, intron 1 of 6) CpG 640 NM_011766 22762 Mm.39496 NM_011766 ENSMUSG00000022306 Zfpm2 B330005D23Rik|FOG-2|FOG2 zinc finger protein, multitype 2 protein-coding common_peak1_96_111_-0.495744367646526_6.55948273823434_1.47693584804675 chr15 40654929 40656420 + 1.47693584804675 NA intron (NM_001356998, intron 1 of 6) CpG 632 NM_011766 22762 Mm.39496 NM_011766 ENSMUSG00000022306 Zfpm2 B330005D23Rik|FOG-2|FOG2 zinc finger protein, multitype 2 protein-coding common_peak1_280_181_0.327503431003786_7.67154635570059_1.47643241465544 chr1 132316198 132319275 + 1.47643241465544 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 1611 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_212_219_-0.342958349163718_7.6098805389428_1.47588701519307 chr6 34598539 34599869 + 1.47588701519307 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 700 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_92_50_0.578859799808741_5.96185524187587_1.47445399465374 chr11 62023387 62024673 + 1.47445399465374 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) -52994 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_60_76_-0.619630471392025_5.95697130499889_1.47445399465373-2 chr9 41586372 41587564 + 1.47445399465373 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 5042 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_60_76_-0.619630471392025_5.95697130499889_1.47445399465373-2 chr7 140035801 140036645 + 1.47445399465373 NA promoter-TSS (NM_027201) promoter-TSS (NM_027201) 127 NM_133755 74237 Mm.40888 NM_133755 ENSMUSG00000025474 Tubgcp2 1700022B05Rik tubulin, gamma complex associated protein 2 protein-coding common_peak1_60_76_-0.619630471392025_5.95697130499889_1.47445399465373 chr15 99848344 99848803 + 1.47445399465373 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 26883 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_60_76_-0.619630471392025_5.95697130499889_1.47445399465373 chr7 51340236 51341277 + 1.47445399465373 NA Intergenic Intergenic -170273 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak2_71_87_-0.574775349537837_6.17204394386838_1.47433608278375 chr10 19045039 19046131 + 1.47433608278375 NA Intergenic Intergenic -30175 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_71_87_-0.574775349537837_6.17204394386838_1.47433608278375 chr11 86592199 86592906 + 1.47433608278375 NA intron (NM_001356531, intron 10 of 11) PB1D10|SINE|Alu -8394 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_105_59_0.531824480088098_6.17280283565257_1.47433608278374 chr1 62766555 62767591 + 1.47433608278374 NA intron (NM_001077404, intron 10 of 16) intron (NM_001077404, intron 10 of 16) 27659 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak2_127_74_0.480056415002183_6.46884689799697_1.4727303365515 chr3 75555973 75556809 + 1.4727303365515 NA intron (NM_019745, intron 1 of 7) CpG 461 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding common_peak1_128_74_0.491204462367762_6.47442092167976_1.4727303365515-2 chr19 8997103 8997828 + 1.4727303365515 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 8181 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_128_74_0.491204462367762_6.47442092167976_1.4727303365515 chr11 59349976 59351088 + 1.4727303365515 NA Intergenic Intergenic 25121 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625-6 chr8 124278842 124279564 + 1.47201190833625 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 47809 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_45_61_-0.71134300859062_5.59852480609156_1.47201190833625 chr4 62207803 62208753 + 1.47201190833625 NA promoter-TSS (NM_001290353) promoter-TSS (NM_001290353) -76 NM_001348347 22696 Mm.5011 NM_009554 ENSMUSG00000028389 Zfp37 Tzn|Zfp-37 zinc finger protein 37 protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625-3 chr4 43419267 43420187 + 1.47201190833625 NA intron (NM_001037709, intron 2 of 11) intron (NM_001037709, intron 2 of 11) 9407 NM_177377 329831 Mm.454466 NM_177377 ENSMUSG00000042788 Fam166b 4833436C18Rik family with sequence similarity 166, member B protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625-4 chr5 92824502 92825242 + 1.47201190833625 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 15490 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625 chr1 21078244 21079150 + 1.47201190833625 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 528 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625-2 chr2 94157203 94157908 + 1.47201190833625 NA intron (NM_019657, intron 1 of 10) intron (NM_019657, intron 1 of 10) 354 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625-7 chr9 59750967 59751847 + 1.47201190833625 NA promoter-TSS (NM_001172071) promoter-TSS (NM_001172071) 233 NM_173018 270163 Mm.249545 NM_173018 ENSMUSG00000039585 Myo9a 4732465J09Rik|C130068I12Rik|C230003M11 myosin IXa protein-coding common_peak1_73_38_0.638503542621949_5.60465399017322_1.47201190833625-5 chr7 119861085 119862018 + 1.47201190833625 NA intron (NM_001163703, intron 1 of 2) intron (NM_001163703, intron 1 of 2) 33907 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding common_peak2_144_85_0.461250185855804_6.65688984763_1.47110896690764 chr12 86825768 86826853 + 1.47110896690764 NA Intergenic Intergenic 58504 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_143_85_0.451336534824119_6.65193302211416_1.47110896690764 chr6 89361233 89362392 + 1.47110896690764 NA intron (NM_008881, intron 1 of 31) CpG 801 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_144_85_0.461250185855804_6.65688984763_1.47110896690764 chr11 79338686 79340504 + 1.47110896690764 NA promoter-TSS (NM_010897) promoter-TSS (NM_010897) -297 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak2_103_118_-0.48338954799932_6.65312298930828_1.47110896690762 chr10 4111570 4113608 + 1.47110896690762 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 100531 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak2_223_229_-0.334955895872183_7.67801210300828_1.47068749161374 chr16 33575697 33577566 + 1.47068749161374 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 58036 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak1_55_71_-0.645280887223632_5.8472845578305_1.46999668045562 chr8 35592709 35593196 + 1.46999668045562 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -3932 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_86_46_0.601159771927083_5.85516873764118_1.46999668045562 chr11 79609935 79611087 + 1.46999668045562 NA intron (NR_003283, intron 2 of 2) intron (NR_003283, intron 2 of 2) 12652 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak2_86_46_0.601159771927083_5.85516873764118_1.46999668045562 chr8 22765081 22765774 + 1.46999668045562 NA intron (NM_008872, intron 1 of 13) intron (NM_008872, intron 1 of 13) 7705 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding common_peak1_86_46_0.601159771927083_5.85516873764118_1.46999668045562-3 chr3 90432897 90433535 + 1.46999668045562 NA 5' UTR (NM_145540, exon 1 of 30) 5' UTR (NM_145540, exon 1 of 30) 420 NM_145540 229543 Mm.268564 NM_145540 ENSMUSG00000027933 Ints3 C77668 integrator complex subunit 3 protein-coding common_peak2_55_71_-0.645280887223632_5.8472845578305_1.46999668045562-2 chr9 44733366 44734034 + 1.46999668045562 NA intron (NM_153537, intron 1 of 21) CpG 1498 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_86_46_0.601159771927083_5.85516873764118_1.46999668045562-2 chr3 56962955 56963799 + 1.46999668045562 NA Intergenic Intergenic 338611 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_55_71_-0.645280887223632_5.8472845578305_1.46999668045562 chr11 59163477 59163827 + 1.46999668045562 NA promoter-TSS (NM_001270791) promoter-TSS (NM_001270791) 93 NM_001270791 216792 Mm.266175 NM_173785 ENSMUSG00000049287 Iba57 4930543L23Rik|A230051G13Rik|C1orf69 IBA57 homolog, iron-sulfur cluster assembly protein-coding common_peak1_80_42_0.627117698425516_5.73982360391486_1.46887387725851 chr15 53101884 53103018 + 1.46887387725851 NA intron (NM_010162, intron 3 of 10) intron (NM_010162, intron 3 of 10) 243732 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_50_66_-0.675422730893866_5.72837782501084_1.46887387725851 chr9 106429551 106430268 + 1.46887387725851 NA 5' UTR (NM_001324534, exon 1 of 3) 5' UTR (NM_001324534, exon 1 of 3) 498 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding common_peak1_80_42_0.627117698425516_5.73982360391486_1.46887387725851-2 chr17 29491930 29492740 + 1.46887387725851 NA intron (NM_008842, intron 4 of 5) intron (NM_008842, intron 4 of 5) 1290 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_80_42_0.627117698425516_5.73982360391486_1.46887387725851-3 chr19 43524791 43525550 + 1.46887387725851 NA promoter-TSS (NM_010324) promoter-TSS (NM_010324) -565 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_152_91_0.440885126161104_6.74400451913757_1.46801713770938 chr3 96261836 96263293 + 1.46801713770938 NA TTS (NM_033596) TTS (NM_033596) 753 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak2_36_52_-0.796959713505757_5.32944059781032_1.46742434643228-2 chr7 74465052 74465752 + 1.46742434643228 NA intron (NM_001038643, intron 2 of 10) intron (NM_001038643, intron 2 of 10) 89378 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_36_52_-0.796959713505757_5.32944059781032_1.46742434643228 chr5 139929380 139929971 + 1.46742434643228 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 21732 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_36_52_-0.796959713505757_5.32944059781032_1.46742434643228 chr12 98258791 98259335 + 1.46742434643228 NA intron (NM_008079, intron 1 of 16) CpG 396 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak2_62_31_0.693370298246834_5.34668514912342_1.46742434643227-2 chr7 98543476 98543962 + 1.46742434643227 NA Intergenic Intergenic 49497 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_62_31_0.693370298246834_5.34668514912342_1.46742434643227 chr8 61605880 61606644 + 1.46742434643227 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -15093 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_62_31_0.693370298246834_5.34668514912342_1.46742434643227 chr16 92465497 92466225 + 1.46742434643227 NA exon (NM_001081549, exon 1 of 4) exon (NM_001081549, exon 1 of 4) 308 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding common_peak1_62_31_0.693370298246834_5.34668514912342_1.46742434643227-2 chr9 56871352 56872144 + 1.46742434643227 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 6644 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding common_peak2_62_31_0.693370298246834_5.34668514912342_1.46742434643227 chr14 121379442 121379826 + 1.46742434643227 NA promoter-TSS (NM_145465) promoter-TSS (NM_145465) -404 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_489_465_-0.232336041254078_8.74801812402724_1.46707739589869 chr2 152827207 152832075 + 1.46707739589869 NA exon (NM_001289717, exon 2 of 3) exon (NM_001289717, exon 2 of 3) 1076 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_188_116_0.39678620131764_7.06875782024222_1.46623026115013 chr3 102364729 102366783 + 1.46623026115013 NA Intergenic Intergenic 103351 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA common_peak1_194_203_-0.360504625681537_7.49217302913073_1.46522435635319 chr2 152736625 152738588 + 1.46522435635319 NA TTS (NM_010495) TTS (NM_010495) 1355 NM_001355113 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak2_227_144_0.355980007611179_7.35789909382052_1.46493489132341 chr3 87152167 87153788 + 1.46493489132341 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 21770 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_355_236_0.285454018355181_8.03147025807585_1.46485268871431 chr3 65956521 65959369 + 1.46485268871431 NA exon (NM_019937, exon 1 of 11) exon (NM_019937, exon 1 of 11) 304 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_66_82_-0.593486413706537_6.07829622449366_1.46410551884986 chr9 6540657 6541554 + 1.46410551884986 NA Intergenic Intergenic -274558 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_99_55_0.54788896052146_6.08129940231833_1.46410551884986 chr14 76110500 76111430 + 1.46410551884986 NA promoter-TSS (NM_013745) promoter-TSS (NM_013745) 74 NM_013745 27275 Mm.21138 NM_013745 ENSMUSG00000022009 Nufip1 Nufip nuclear fragile X mental retardation protein interacting protein 1 protein-coding common_peak2_66_82_-0.593486413706537_6.07829622449366_1.46410551884986 chr1 182094025 182095291 + 1.46410551884986 NA Intergenic Intergenic -30079 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak1_294_192_0.312490987661989_7.74870253109908_1.46154342032876 chr15 75908351 75910578 + 1.46154342032876 NA promoter-TSS (NM_001285430) promoter-TSS (NM_001285430) 92 NM_001285431 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802-3 chr6 114890619 114891105 + 1.46151065785802 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 30959 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_16_29_-1.09000475869882_4.36188821625911_1.46151065785802-5 chrX 71464390 71465001 + 1.46151065785802 NA intron (NM_001199349, intron 1 of 9) intron (NM_001199349, intron 1 of 9) 28154 NM_138309 171486 Mm.283879 NM_138309 ENSMUSG00000035776 Cd99l2 AW548191|Mic2l1|Xap89 CD99 antigen-like 2 protein-coding unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802-6 chr9 47703895 47704269 + 1.46151065785802 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 114126 NR_046048 100038460 Mm.447649 NR_046048 Gm10677 - predicted gene 10677 ncRNA unique_peak2_16_29_-1.09000475869882_4.36188821625911_1.46151065785802-4 chr7 116209279 116209498 + 1.46151065785802 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -10827 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802-2 chr3 150818442 150819075 + 1.46151065785802 NA Intergenic Intergenic 205104 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA unique_peak2_16_29_-1.09000475869882_4.36188821625911_1.46151065785802 chr1 7088348 7088755 + 1.46151065785802 NA promoter-TSS (NM_183028) promoter-TSS (NM_183028) -369 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak2_16_29_-1.09000475869882_4.36188821625911_1.46151065785802-3 chr13 37854192 37854739 + 1.46151065785802 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 27072 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802-7 chr9 107305561 107306107 + 1.46151065785802 NA Intergenic Intergenic 9175 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802 chr15 77922911 77923221 + 1.46151065785802 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 5928 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_34_14_0.944465396937285_4.37912329407716_1.46151065785802 chr9 41480531 41480758 + 1.46151065785802 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 5751 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA unique_peak2_16_29_-1.09000475869882_4.36188821625911_1.46151065785802-2 chr11 106160318 106160740 + 1.46151065785802 NA promoter-TSS (NM_001356459) promoter-TSS (NM_001356459) 200 NM_001356458 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802-4 chr6 146960849 146961141 + 1.46151065785802 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -6574 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802-5 chr8 24431015 24431511 + 1.46151065785802 NA Intergenic Intergenic 7683 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_16_29_-1.09000475869882_4.36188821625911_1.46151065785802 chr18 32448104 32448377 + 1.46151065785802 NA Intergenic Intergenic -69956 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA unique_peak1_34_14_0.944465396937285_4.37912329407716_1.46151065785802 chr15 53685987 53686434 + 1.46151065785802 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -71931 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_185_195_-0.370479681908217_7.4294700031611_1.46108532192875 chr1 16102861 16105220 + 1.46108532192875 NA intron (NM_011291, intron 1 of 6) intron (NM_011291, intron 1 of 6) 393 NM_011291 19989 Mm.319659 NM_011291 ENSMUSG00000043716 Rpl7 Rpl7a|Surf-3 ribosomal protein L7 protein-coding common_peak2_22_36_-0.959545084259451_4.72968082349922_1.46094028072561 chr6 82756736 82756953 + 1.46094028072561 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 17610 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding unique_peak2_22_36_-0.959545084259451_4.72968082349922_1.46094028072561-2 chr6 47663771 47663974 + 1.46094028072561 NA promoter-TSS (NR_002841).3 promoter-TSS (NR_002841).3 -117 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_22_36_-0.959545084259451_4.72968082349922_1.46094028072561-2 chr8 32285822 32286269 + 1.46094028072561 NA Intergenic Intergenic 134150 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA unique_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561 chr10 117792155 117792640 + 1.46094028072561 NA intron (NM_134010, intron 1 of 27) CpG 308 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_22_36_-0.959545084259451_4.72968082349922_1.46094028072561 chr5 34989929 34990217 + 1.46094028072561 NA intron (NM_173402, intron 3 of 16) intron (NM_173402, intron 3 of 16) -9005 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak2_22_36_-0.959545084259451_4.72968082349922_1.46094028072561 chr11 96259306 96259987 + 1.46094028072561 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) -5518 NR_029721 387191 NR_029721 ENSMUSG00000065546 Mir196a-1 Mirn196|Mirn196a-1|miR-196|mir-196a-1 microRNA 196a-1 ncRNA unique_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561-2 chr4 89486413 89486996 + 1.46094028072561 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -175672 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561 chr13 42565878 42566675 + 1.46094028072561 NA Intergenic Intergenic -114523 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561-2 chr2 166906626 166907242 + 1.46094028072561 NA intron (NM_023565, intron 1 of 24) intron (NM_023565, intron 1 of 24) 838 NM_023565 110750 Mm.22417 NM_023565 ENSMUSG00000002718 Cse1l 2610100P18Rik|AA407533|Capts|Cas|Xpo2 chromosome segregation 1-like (S. cerevisiae) protein-coding common_peak2_22_36_-0.959545084259451_4.72968082349922_1.46094028072561-2 chr8 36730076 36730486 + 1.46094028072561 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 2773 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561-4 chr4 59682832 59683424 + 1.46094028072561 NA intron (NM_001015681, intron 1 of 3) intron (NM_001015681, intron 1 of 3) 56917 NM_153158 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding common_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561-3 chr3 37204182 37204552 + 1.46094028072561 NA Intergenic Intergenic 21482 NR_153188 102639848 Mm.424479 NR_153188 Gm12532 - predicted gene 12532 ncRNA unique_peak1_43_19_0.857247307709698_4.75055174874221_1.46094028072561-3 chr9 19622148 19622668 + 1.46094028072561 NA non-coding (NR_153376, exon 1 of 11) non-coding (NR_153376, exon 1 of 11) 104 NR_153376 244713 Mm.67366 NM_172918 ENSMUSG00000057551 Zfp317 4932416G03|D230022C05Rik|KRAB9|Zfp67|Zfp75|mszf40 zinc finger protein 317 protein-coding common_peak1_107_60_0.534754533764028_6.1981146044449_1.458285647713 chr11 22990261 22991515 + 1.458285647713 NA intron (NM_009837, intron 1 of 13) CpG 295 NM_009837 12464 Mm.296985 NM_009837 ENSMUSG00000007739 Cct4 2610204B21Rik|A45|C78323|Cctd chaperonin containing Tcp1, subunit 4 (delta) protein-coding common_peak1_106_60_0.521428699466272_6.19145168729602_1.458285647713 chr3 84258762 84259656 + 1.458285647713 NA intron (NM_001271726, intron 1 of 11) intron (NM_001271726, intron 1 of 11) 570 NM_001271727 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_33_48_-0.804878986778757_5.21227035072583_1.45748092439676 chr1 186587513 186587881 + 1.45748092439676 NA Intergenic Intergenic -29016 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_57_28_0.716932026249695_5.21644700825242_1.45748092439675-2 chr13 54694372 54695057 + 1.45748092439675 NA promoter-TSS (NR_027395) promoter-TSS (NR_027395) -754 NR_027396 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_57_28_0.716932026249695_5.21644700825242_1.45748092439675 chr1 166811393 166812244 + 1.45748092439675 NA Intergenic Intergenic -129973 NM_001347135 240894 Mm.246610 NM_172844 ENSMUSG00000026560 Fmo9 4831428F09Rik flavin containing monooxygenase 9 protein-coding common_peak1_58_28_0.741420090195108_5.22869104022513_1.45748092439675-3 chr9 7836207 7836724 + 1.45748092439675 NA intron (NM_007465, intron 1 of 7) intron (NM_007465, intron 1 of 7) 341 NM_001291503 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak2_57_28_0.716932026249695_5.21644700825242_1.45748092439675-2 chr15 51799148 51799588 + 1.45748092439675 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 66093 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_58_28_0.741420090195108_5.22869104022513_1.45748092439675 chr1 192659418 192660058 + 1.45748092439675 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 111481 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak1_57_28_0.716932026249695_5.21644700825242_1.45748092439675-3 chr3 121712463 121713201 + 1.45748092439675 NA Intergenic Intergenic -10705 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_58_28_0.741420090195108_5.22869104022513_1.45748092439675-2 chr15 39112894 39113297 + 1.45748092439675 NA promoter-TSS (NM_172402) promoter-TSS (NM_172402) 221 NM_198606 223499 Mm.321937 NM_198606 ENSMUSG00000022300 Dcaf13 Gm83|Wdsof1 DDB1 and CUL4 associated factor 13 protein-coding unique_peak1_57_28_0.716932026249695_5.21644700825242_1.45748092439675 chr11 120257315 120258001 + 1.45748092439675 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 24711 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding unique_peak1_57_28_0.716932026249695_5.21644700825242_1.45748092439675-2 chrX 142898057 142898469 + 1.45748092439675 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 68465 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_57_28_0.716932026249695_5.21644700825242_1.45748092439675 chr14 56668380 56668972 + 1.45748092439675 NA intron (NM_001360072, intron 1 of 13) CpG 428 NM_023773 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding common_peak1_111_126_-0.471095552126729_6.7531369107088_1.45722224521209 chr2 72978535 72980373 + 1.45722224521209 NA promoter-TSS (NM_001098425) promoter-TSS (NM_001098425) 22 NR_045269 100503849 Mm.389285 NM_183265 Sp3os 1700011J10Rik trans-acting transcription factor 3, opposite strand ncRNA common_peak2_112_126_-0.458361985111914_6.75950369421621_1.45722224521209 chr2 152737620 152738792 + 1.45722224521209 NA TTS (NM_010495) TTS (NM_010495) 1955 NM_001355113 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak1_121_70_0.49035397022495_6.39492410461716_1.45667542523217 chr17 27819554 27820571 + 1.45667542523217 NA intron (NM_001033279, intron 1 of 4) intron (NM_001033279, intron 1 of 4) 480 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak1_121_70_0.49035397022495_6.39492410461716_1.45667542523217-2 chr8 72240112 72240716 + 1.45667542523217 NA intron (NM_007456, intron 1 of 11) CpG 396 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak1_121_70_0.49035397022495_6.39492410461716_1.45667542523217-3 chr8 119910795 119911499 + 1.45667542523217 NA intron (NM_009462, intron 1 of 13) CpG 787 NM_001310630 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding common_peak1_121_70_0.49035397022495_6.39492410461716_1.45667542523217-4 chr9 107580219 107581506 + 1.45667542523217 NA promoter-TSS (NM_178020) promoter-TSS (NM_178020) 193 NM_019750 56441 Mm.10305 NM_019750 ENSMUSG00000079334 Nat6 AI225910|Fus2 N-acetyltransferase 6 protein-coding common_peak2_84_100_-0.535778706234709_6.39032212963444_1.45667542523217 chr10 57531843 57532820 + 1.45667542523217 NA intron (NM_019760, intron 1 of 8) CpG 198 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding common_peak2_78_94_-0.552287942055671_6.29371163730311_1.45604295944251 chr11 82031613 82032903 + 1.45604295944251 NA Intergenic Intergenic -3319 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak2_78_94_-0.552287942055671_6.29371163730311_1.45604295944251-2 chr6 42511891 42513525 + 1.45604295944251 NA Intergenic Intergenic -25494 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak2_114_65_0.511061101618435_6.29992467016767_1.45604295944248 chr15 80910923 80912129 + 1.45604295944248 NA intron (NM_177124, intron 14 of 21) intron (NM_177124, intron 14 of 21) -28513 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_114_65_0.511061101618435_6.29992467016767_1.45604295944248 chr15 77037787 77038512 + 1.45604295944248 NA intron (NM_013593, intron 1 of 3) intron (NM_013593, intron 1 of 3) -6926 NM_001163621 71939 Mm.34173 NM_028010 ENSMUSG00000033576 Apol6 2310076O14Rik apolipoprotein L 6 protein-coding common_peak1_114_65_0.511061101618435_6.29992467016767_1.45604295944248-2 chr18 73571435 73572380 + 1.45604295944248 NA promoter-TSS (NM_001039214) promoter-TSS (NM_001039214) -798 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_61_77_-0.614952679309467_5.97792587920751_1.45585814500231 chr13 107021009 107022078 + 1.45585814500231 NA intron (NM_008442, intron 1 of 21) intron (NM_008442, intron 1 of 21) 571 NM_001145779 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding common_peak2_61_77_-0.614952679309467_5.97792587920751_1.45585814500231-2 chr2 121449439 121450281 + 1.45585814500231 NA intron (NM_001290837, intron 1 of 2) CpG 662 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak1_93_51_0.566166605587719_5.98352302093495_1.4558581450023 chr10 80930149 80931165 + 1.4558581450023 NA intron (NM_008655, intron 2 of 3) CpG-1325 566 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_160_171_-0.388807382904958_7.23186106324962_1.45486652109021 chr11 86603282 86605548 + 1.45486652109021 NA intron (NM_001356531, intron 9 of 11) (CAAA)n|Simple_repeat|Simple_repeat -20257 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_23_8_1.14095064500294_3.74040032394378_1.45476480588849 chr1 34124153 34124367 + 1.45476480588849 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 6901 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-15 chr8 121527182 121527460 + 1.45476480588849 NA Intergenic Intergenic 14633 NM_001357260 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-10 chr13 51970823 51971167 + 1.45476480588849 NA Intergenic Intergenic 124320 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-14 chr8 13649418 13649868 + 1.45476480588849 NA intron (NM_009025, intron 1 of 23) G-rich|Low_complexity|Low_complexity 27944 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849 chr1 37890054 37890349 + 1.45476480588849 NA promoter-TSS (NM_001356482) promoter-TSS (NM_001356482) 210 NM_026913 69028 Mm.63984 NM_026913 ENSMUSG00000026088 Mitd1 1500032H18Rik MIT, microtubule interacting and transport, domain containing 1 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-5 chr15 77866885 77867168 + 1.45476480588849 NA Intergenic Intergenic -24851 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-13 chr14 20246534 20246857 + 1.45476480588849 NA Intergenic ID_B1|SINE|B4 22467 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-35 chr7 28334819 28335145 + 1.45476480588849 NA intron (NM_013676, intron 2 of 29) intron (NM_013676, intron 2 of 29) 3737 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-2 chr14 28983322 28983706 + 1.45476480588849 NA intron (NM_009785, intron 27 of 37) intron (NM_009785, intron 27 of 37) -34694 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-33 chr6 91259234 91259740 + 1.45476480588849 NA intron (NM_001081437, intron 8 of 16) intron (NM_001081437, intron 8 of 16) 46723 NM_007992 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-18 chr16 85800106 85800453 + 1.45476480588849 NA exon (NM_009621, exon 2 of 9) exon (NM_009621, exon 2 of 9) 2834 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-8 chr11 119393223 119393545 + 1.45476480588849 NA Intergenic Intergenic 2912 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-5 chr10 91083021 91083285 + 1.45476480588849 NA promoter-TSS (NM_009684) promoter-TSS (NM_009684) 114 NM_026166 67454 Mm.252843 NM_026166 ENSMUSG00000019975 Ikbip 1200009F10Rik|1700023M03Rik|D18354|Ikip IKBKB interacting protein protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-27 chr2 32865806 32866165 + 1.45476480588849 NA Intergenic Intergenic -10149 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-3 chr11 119268141 119268347 + 1.45476480588849 NA intron (NM_008064, intron 1 of 19) CpG 281 NM_008064 14387 Mm.4793 NM_008064 ENSMUSG00000025579 Gaa E430018M07Rik glucosidase, alpha, acid protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-36 chr7 81183205 81183401 + 1.45476480588849 NA Intergenic Intergenic -30501 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-4 chr13 32541988 32542403 + 1.45476480588849 NA Intergenic Intergenic -203651 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-19 chr16 90143344 90143710 + 1.45476480588849 NA non-coding (NR_033476, exon 1 of 1) non-coding (NR_033476, exon 1 of 1) 1290 NR_033476 100038709 Mm.484070 NR_033476 Gm10789 - predicted gene 10789 ncRNA unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-7 chr11 98751141 98751532 + 1.45476480588849 NA intron (NM_178060, intron 1 of 8) intron (NM_178060, intron 1 of 8) 9551 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-41 chr9 112950560 112950916 + 1.45476480588849 NA Intergenic Intergenic 636414 NR_040760 102688 Mm.394901 NR_040760 ENSMUSG00000109890 AU023762 - expressed sequence AU023762 ncRNA unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849 chr1 43130941 43131293 + 1.45476480588849 NA intron (NM_010212, intron 4 of 5) intron (NM_010212, intron 4 of 5) 32407 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-26 chr19 41456959 41457330 + 1.45476480588849 NA Intergenic Intergenic -68108 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-12 chr13 119140775 119141206 + 1.45476480588849 NA Intergenic Intergenic 268021 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849 chr11 76476438 76476697 + 1.45476480588849 NA intron (NM_001346670, intron 3 of 21) intron (NM_001346670, intron 3 of 21) -8102 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-3 chr15 76205967 76206265 + 1.45476480588849 NA exon (NM_001163540, exon 1 of 33) exon (NM_001163540, exon 1 of 33) 205 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-37 chr7 116306501 116306823 + 1.45476480588849 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 1714 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-12 chr7 3150867 3151119 + 1.45476480588849 NA Intergenic Intergenic 18210 NM_001004153 245128 Mm.268551 NM_001004153 ENSMUSG00000054753 AU018091 - expressed sequence AU018091 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-21 chr17 43580497 43580992 + 1.45476480588849 NA intron (NM_013737, intron 1 of 11) intron (NM_013737, intron 1 of 11) 10765 NR_045445 73504 Mm.9277 NR_045444 ENSMUSG00000090307 1700071M16Rik - RIKEN cDNA 1700071M16 gene ncRNA unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-14 chr14 25481429 25481855 + 1.45476480588849 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 22457 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-22 chr17 84079531 84079870 + 1.45476480588849 NA intron (NR_045458, intron 1 of 5) intron (NR_045458, intron 1 of 5) 1040 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-31 chr5 134571840 134572202 + 1.45476480588849 NA promoter-TSS (NR_106087) promoter-TSS (NR_106087) -55 NR_106087 102465708 NR_106087 ENSMUSG00000106323 Mir7228 mmu-mir-7228 microRNA 7228 ncRNA unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-3 chr10 23348669 23348926 + 1.45476480588849 NA intron (NM_010167, intron 1 of 18) intron (NM_010167, intron 1 of 18) 1093 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-29 chr2 157371746 157372034 + 1.45476480588849 NA intron (NM_026968, intron 1 of 2) intron (NM_026968, intron 1 of 2) 4296 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-34 chr7 24389767 24389973 + 1.45476480588849 NA Intergenic Intergenic -9758 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-2 chr10 7780601 7780857 + 1.45476480588849 NA intron (NM_145418, intron 1 of 7) CpG 188 NM_145418 215751 Mm.471825 NM_145418 ENSMUSG00000040006 Ginm1 AA589616 glycoprotein integral membrane 1 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-20 chr17 6476864 6477107 + 1.45476480588849 NA Intergenic CpG -25991 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-15 chr14 30877093 30877588 + 1.45476480588849 NA TTS (NM_028839) TTS (NM_028839) -1917 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-9 chr12 8358657 8358973 + 1.45476480588849 NA Intergenic Intergenic 45382 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-25 chr18 61109604 61109933 + 1.45476480588849 NA exon (NM_001037859, exon 3 of 22) exon (NM_001037859, exon 3 of 22) 4196 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-6 chr11 85324327 85324744 + 1.45476480588849 NA intron (NM_016910, intron 1 of 5) intron (NM_016910, intron 1 of 5) 13281 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-39 chr9 32698666 32698972 + 1.45476480588849 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 2777 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-9 chr3 89421662 89421993 + 1.45476480588849 NA 5' UTR (NM_001113331, exon 1 of 12) 5' UTR (NM_001113331, exon 1 of 12) 206 NM_001113331 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding common_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849 chr18 46674708 46674981 + 1.45476480588849 NA Intergenic Intergenic 53658 NM_033037 12583 Mm.241056 NM_033037 ENSMUSG00000033022 Cdo1 1300002L19Rik|Cdo|D18Ucla3 cysteine dioxygenase 1, cytosolic protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-5 chr4 95026267 95026589 + 1.45476480588849 NA Intergenic Intergenic 25794 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-28 chr2 53030238 53030647 + 1.45476480588849 NA intron (NM_172409, intron 2 of 26) intron (NM_172409, intron 2 of 26) 160745 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-16 chr15 96289166 96289504 + 1.45476480588849 NA intron (NM_175251, intron 3 of 20) intron (NM_175251, intron 3 of 20) 1813 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-17 chr16 23980507 23981011 + 1.45476480588849 NA 5' UTR (NM_001348026, exon 1 of 10) 5' UTR (NM_001348026, exon 1 of 10) 524 NM_001348026 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-24 chr18 60620093 60620401 + 1.45476480588849 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 4058 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-13 chr7 113250173 113250559 + 1.45476480588849 NA intron (NM_001243048, intron 2 of 16) intron (NM_001243048, intron 2 of 16) 42901 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-11 chr13 115090806 115091211 + 1.45476480588849 NA promoter-TSS (NM_134058) promoter-TSS (NM_134058) -850 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota mRNA surveillance and ribosome rescue factor protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-6 chr6 37355429 37355765 + 1.45476480588849 NA intron (NM_178661, intron 6 of 11) intron (NM_178661, intron 6 of 11) -55621 NM_001347104 320127 Mm.119469 NM_001081206 ENSMUSG00000038665 Dgki 6430604M11Rik|C130010K08Rik diacylglycerol kinase, iota protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-23 chr18 6764532 6764831 + 1.45476480588849 NA promoter-TSS (NM_001278447) promoter-TSS (NM_001278447) -486 NM_181070 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-30 chr5 106574203 106574598 + 1.45476480588849 NA Intergenic CpG -116234 NM_001005477 104382 Mm.271593 NM_001005477 ENSMUSG00000034384 Barhl2 E130309B19Rik|MBH1 BarH like homeobox 2 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-10 chr4 5644313 5644648 + 1.45476480588849 NA intron (NM_173426, intron 1 of 2) CpG 390 NM_173426 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-7 chr17 44717694 44718001 + 1.45476480588849 NA intron (NR_073425, intron 2 of 5) intron (NR_073425, intron 2 of 5) 18329 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-4 chr10 80052071 80052434 + 1.45476480588849 NA intron (NR_110342, intron 2 of 6) intron (NR_110342, intron 2 of 6) -1236 NM_008162 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-2 chr11 115966168 115966519 + 1.45476480588849 NA TTS (NM_020483) TTS (NM_020483) -8382 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-8 chr18 34887642 34887878 + 1.45476480588849 NA Intergenic CpG 26553 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-7 chr9 22071351 22071820 + 1.45476480588849 NA promoter-TSS (NM_001310759) promoter-TSS (NM_001310759) -209 NM_001310759 319601 Mm.347707 NM_177318 ENSMUSG00000038895 Zfp653 E430039K05Rik|Znf653 zinc finger protein 653 protein-coding common_peak2_23_8_1.14095064500294_3.74040032394378_1.45476480588849-2 chr14 48224750 48224974 + 1.45476480588849 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 26146 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_9_20_-1.33556550023384_3.72453467266184_1.45476480588849 chr10 108433240 108433437 + 1.45476480588849 NA Intergenic Intergenic 101149 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-38 chr8 49349105 49349571 + 1.45476480588849 NA Intergenic Intergenic -674648 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-4 chr17 36025774 36026100 + 1.45476480588849 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -5377 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-6 chr15 88751042 88751338 + 1.45476480588849 NA promoter-TSS (NM_181412) promoter-TSS (NM_181412) -521 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-40 chr9 106380425 106380686 + 1.45476480588849 NA Intergenic Intergenic 11923 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding unique_peak2_9_20_-1.33556550023384_3.72453467266184_1.45476480588849-11 chr4 109147651 109148047 + 1.45476480588849 NA intron (NM_001346502, intron 3 of 23) intron (NM_001346502, intron 3 of 23) -9936 NM_001355190 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding unique_peak1_23_8_1.14095064500294_3.74040032394378_1.45476480588849-32 chr6 90795858 90796204 + 1.45476480588849 NA intron (NM_001356440, intron 1 of 13) intron (NM_001356440, intron 1 of 13) 14092 NM_001356440 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_69_35_0.674376011530247_5.50711300720744_1.45455780655082 chr10 81495693 81496380 + 1.45455780655082 NA intron (NM_134009, intron 1 of 13) intron (NM_134009, intron 1 of 13) 327 NM_134009 103425 Mm.302791 NM_134009 ENSMUSG00000020238 Ncln 3100002P13Rik|AW120537 nicalin protein-coding common_peak1_68_35_0.653763902581397_5.49680695273301_1.45455780655082 chr11 60934912 60935403 + 1.45455780655082 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 3100 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding unique_peak2_42_57_-0.71173846491814_5.5021117626685_1.45455780655082-2 chr9 124465352 124466202 + 1.45455780655082 NA Intergenic Intergenic 11085 NM_001163415 19054 Mm.271249 NM_011154 ENSMUSG00000093803 Ppp2r3d PP2A B''-PR59|PP2A PR59|PR59|Ppp2r3|Ppp2r3a protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta protein-coding common_peak2_42_57_-0.71173846491814_5.5021117626685_1.45455780655082 chr1 65186738 65187403 + 1.45455780655082 NA promoter-TSS (NM_001111320) promoter-TSS (NM_001111320) 385 NM_011086 18711 Mm.38370 NM_011086 ENSMUSG00000025949 Pikfyve 5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235 phosphoinositide kinase, FYVE type zinc finger containing protein-coding common_peak1_68_35_0.653763902581397_5.49680695273301_1.45455780655082-2 chr16 21332317 21333137 + 1.45455780655082 NA non-coding (NR_131983, exon 1 of 1) non-coding (NR_131983, exon 1 of 1) 629 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak1_68_35_0.653763902581397_5.49680695273301_1.45455780655082-3 chr5 107597766 107598504 + 1.45455780655082 NA promoter-TSS (NM_001161738) promoter-TSS (NM_001161738) 174 NM_001359916 231571 Mm.482420 NM_144911 ENSMUSG00000033773 Rpap2 AW060207 RNA polymerase II associated protein 2 protein-coding common_peak1_69_35_0.674376011530247_5.50711300720744_1.45455780655082 chr14 120307108 120308184 + 1.45455780655082 NA intron (NM_001360376, intron 1 of 8) intron (NM_001360376, intron 1 of 8) 1194 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak1_69_35_0.674376011530247_5.50711300720744_1.45455780655082 chr8 35865484 35866019 + 1.45455780655082 NA non-coding (NR_046181, exon 3 of 3) non-coding (NR_046181, exon 3 of 3) 17206 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak1_41_57_-0.745446299108192_5.48525784557348_1.45455780655082 chr10 111515919 111516377 + 1.45455780655082 NA Intergenic Intergenic 9862 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak2_41_57_-0.745446299108192_5.48525784557348_1.45455780655082 chr10 58322654 58323249 + 1.45455780655082 NA promoter-TSS (NM_001359115) promoter-TSS (NM_001359115) -596 NM_001359115 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding unique_peak1_68_35_0.653763902581397_5.49680695273301_1.45455780655082 chr18 34006227 34007087 + 1.45455780655082 NA intron (NM_013512, intron 1 of 23) CpG-6813 549 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding unique_peak2_42_57_-0.71173846491814_5.5021117626685_1.45455780655082 chr19 28244823 28245721 + 1.45455780655082 NA Intergenic Intergenic -234106 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252 chr1 74377121 74377341 + 1.45399745587252 NA exon (NM_013612, exon 4 of 15) exon (NM_013612, exon 4 of 15) 2028 NM_013612 18173 Mm.2913 NM_013612 ENSMUSG00000026177 Slc11a1 Bcg|Ity|Ity1|Lsh|Nramp|Nramp1|ity solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-56 chr8 11270661 11270875 + 1.45399745587252 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -42037 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-22 chr4 119114492 119114699 + 1.45399745587252 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 5850 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-41 chr3 37503132 37503371 + 1.45399745587252 NA intron (NM_021343, intron 14 of 15) intron (NM_021343, intron 14 of 15) 83301 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-9 chr13 58181324 58181523 + 1.45399745587252 NA intron (NM_026842, intron 7 of 10) intron (NM_026842, intron 7 of 10) 23774 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-30 chr6 54682163 54682396 + 1.45399745587252 NA intron (NM_001289741, intron 1 of 4) CpG 655 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-8 chr15 6428852 6429054 + 1.45399745587252 NA intron (NM_001008702, intron 9 of 13) intron (NM_001008702, intron 9 of 13) -16380 NM_013485 12279 Mm.29095 NM_013485 ENSMUSG00000022149 C9 - complement component 9 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-14 chr11 62222648 62222840 + 1.45399745587252 NA 3' UTR (NM_001281818, exon 15 of 15) 3' UTR (NM_001281818, exon 15 of 15) -26240 NM_007413 11541 Mm.40740 NM_007413 ENSMUSG00000018500 Adora2b A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384 adenosine A2b receptor protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-19 chr12 99262972 99263187 + 1.45399745587252 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -100271 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-15 chr18 67380283 67380521 + 1.45399745587252 NA Intergenic Intergenic -10329 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-50 chr6 143619067 143619287 + 1.45399745587252 NA intron (NR_045732, intron 2 of 4) intron (NR_045732, intron 2 of 4) 32111 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-39 chr2 165905156 165905367 + 1.45399745587252 NA Intergenic Intergenic -20423 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-9 chr10 71149974 71150173 + 1.45399745587252 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 9617 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-11 chr11 43991787 43992012 + 1.45399745587252 NA Intergenic Intergenic -90662 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-18 chr2 60828651 60828846 + 1.45399745587252 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) 52690 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-3 chr1 135864437 135864670 + 1.45399745587252 NA Intergenic Intergenic 23692 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-45 chr5 34635847 34636043 + 1.45399745587252 NA intron (NM_026660, intron 4 of 12) intron (NM_026660, intron 4 of 12) 1267 NM_001356978 68294 Mm.34564 NM_026660 ENSMUSG00000001082 Mfsd10 0610009O03Rik|Tetran major facilitator superfamily domain containing 10 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-20 chr3 67483343 67483534 + 1.45399745587252 NA intron (NM_001164763, intron 4 of 5) intron (NM_001164763, intron 4 of 5) -19531 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-7 chr10 56422365 56422558 + 1.45399745587252 NA Intergenic Intergenic -9520 NR_152769 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-32 chr17 66739500 66739722 + 1.45399745587252 NA intron (NM_001357625, intron 22 of 32) intron (NM_001357625, intron 22 of 32) 25155 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-10 chr18 56720079 56720313 + 1.45399745587252 NA intron (NM_010721, intron 1 of 10) intron (NM_010721, intron 1 of 10) 12383 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-27 chr5 31151296 31151544 + 1.45399745587252 NA intron (NM_001310527, intron 2 of 7) MIRc|SINE|MIR 2760 NM_001294324 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-8 chr13 54670058 54670270 + 1.45399745587252 NA Intergenic Intergenic 17644 NM_001146025 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-3 chr1 136119318 136119515 + 1.45399745587252 NA 3' UTR (NM_014193, exon 43 of 43) 3' UTR (NM_014193, exon 43 of 43) 11767 NR_046170 329253 Mm.487858 NR_046167 ENSMUSG00000086264 Gm15850 6530439I21 predicted gene 15850 ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-60 chr9 102866010 102866212 + 1.45399745587252 NA intron (NM_001042607, intron 2 of 14) intron (NM_001042607, intron 2 of 14) 31191 NM_001284258 20187 Mm.335391 NM_013649 ENSMUSG00000032547 Ryk AW536699|ERK-3|Vik receptor-like tyrosine kinase protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-27 chr16 31189745 31189964 + 1.45399745587252 NA intron (NM_030138, intron 1 of 22) PB1D11|SINE|Alu 11384 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-61 chr9 107563943 107564144 + 1.45399745587252 NA intron (NM_019742, intron 1 of 2) intron (NM_019742, intron 1 of 2) 788 NM_019742 80385 Mm.21739 NM_019742 ENSMUSG00000010054 Tusc2 1190001E22Rik|AA407686|Fus1|Lgcc|PAP|Pdap2 tumor suppressor candidate 2 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252 chr1 91321661 91321861 + 1.45399745587252 NA promoter-TSS (NM_001033292) promoter-TSS (NM_001033292) -314 NM_001033292 227357 Mm.318167 NM_001033292 ENSMUSG00000049515 Espnl Gm556 espin-like protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-43 chr4 54358079 54358272 + 1.45399745587252 NA Intergenic Intergenic 532130 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-24 chr4 134996394 134996581 + 1.45399745587252 NA Intergenic Intergenic 65507 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-17 chr6 71950829 71951081 + 1.45399745587252 NA intron (NM_009088, intron 18 of 33) intron (NM_009088, intron 18 of 33) 41902 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-20 chr12 110488592 110488789 + 1.45399745587252 NA intron (NM_001081457, intron 1 of 12) intron (NM_001081457, intron 1 of 12) 2951 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-7 chr12 112949560 112949815 + 1.45399745587252 NA Intergenic Intergenic -7545 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-46 chr5 114646461 114646658 + 1.45399745587252 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 11862 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-21 chr4 14103386 14103628 + 1.45399745587252 NA Intergenic Intergenic 187802 NR_131155 100040030 Mm.366499 NR_131155 Gm2560 - predicted gene 2560 ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-37 chr19 24983015 24983299 + 1.45399745587252 NA Intergenic Intergenic -16372 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-23 chr14 47087029 47087246 + 1.45399745587252 NA intron (NM_001037221, intron 9 of 12) intron (NM_001037221, intron 9 of 12) 18160 NM_001310544 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-2 chr1 105324863 105325089 + 1.45399745587252 NA intron (NM_001160368, intron 1 of 1) intron (NM_001160368, intron 1 of 1) -31031 NR_151539 100504568 Mm.321153 NR_151538 ENSMUSG00000097482 Gm17634 - predicted gene, 17634 ncRNA unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-17 chr19 35269077 35269284 + 1.45399745587252 NA Intergenic Intergenic 303784 NR_035473 100316775 NR_035473 ENSMUSG00000089151 Mir1950 mmu-mir-1950 microRNA 1950 ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-4 chr1 152843211 152843424 + 1.45399745587252 NA exon (NM_001359257, exon 19 of 24) exon (NM_001359257, exon 19 of 24) 43164 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-47 chr5 137012913 137013122 + 1.45399745587252 NA Intergenic B1_Mur4|SINE|Alu -17278 NM_001039385 381677 Mm.389697 NM_001039385 ENSMUSG00000037428 Vgf Gm1052 VGF nerve growth factor inducible protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-17 chr11 119127425 119127668 + 1.45399745587252 NA Intergenic Intergenic 26591 NR_105899 102465563 NR_105899 ENSMUSG00000098704 Mir6934 Gm27523|mmu-mir-6934 microRNA 6934 ncRNA unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-25 chr4 136355562 136355752 + 1.45399745587252 NA Intergenic Intergenic 44059 NM_001355182 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-33 chr9 32257264 32257456 + 1.45399745587252 NA exon (NM_177379, exon 12 of 13) exon (NM_177379, exon 12 of 13) 33111 NM_177379 330914 Mm.46683 NM_177379 ENSMUSG00000041444 Arhgap32 3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap Rho GTPase activating protein 32 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-10 chr13 109736960 109737190 + 1.45399745587252 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -166734 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-35 chr9 63612236 63612494 + 1.45399745587252 NA intron (NR_151671, intron 1 of 9) ID_B1|SINE|B4 9719 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-9 chr17 75483730 75483930 + 1.45399745587252 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 18292 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-62 chr9 122353708 122353946 + 1.45399745587252 NA intron (NM_001359207, intron 1 of 4) intron (NM_001359207, intron 1 of 4) 2211 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-5 chr1 162734510 162734715 + 1.45399745587252 NA intron (NM_001081290, intron 1 of 34) B1_Mur1|SINE|Alu 5944 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-15 chr5 23989758 23989972 + 1.45399745587252 NA intron (NM_001310471, intron 3 of 10) intron (NM_001310471, intron 3 of 10) 40447 NM_001310471 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-40 chr2 173049886 173050081 + 1.45399745587252 NA Intergenic Intergenic 28081 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-16 chr11 114846618 114846815 + 1.45399745587252 NA Intergenic Intergenic -4816 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252 chr1 72256064 72256281 + 1.45399745587252 NA intron (NR_155355, intron 1 of 3) B4A|SINE|B4 12179 NR_155355 320933 Mm.440953 NR_155355 D230017M19Rik B930094L07Rik RIKEN cDNA D230017M19 gene ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-53 chr7 95973273 95973465 + 1.45399745587252 NA Intergenic Intergenic -197875 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-32 chr8 44775037 44775225 + 1.45399745587252 NA Intergenic Intergenic -175077 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-2 chr1 131227905 131228118 + 1.45399745587252 NA intron (NM_018750, intron 1 of 5) B1F|SINE|Alu 17167 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-12 chr17 27807438 27807664 + 1.45399745587252 NA intron (NM_001033279, intron 1 of 4) intron (NM_001033279, intron 1 of 4) 12991 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-8 chr10 67727796 67727990 + 1.45399745587252 NA Intergenic ID4|SINE|ID -155934 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-48 chr5 140535597 140535888 + 1.45399745587252 NA Intergenic RLTR31D_MM|LTR|ERVK 29325 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-4 chr11 29629691 29629905 + 1.45399745587252 NA Intergenic Intergenic -63100 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-4 chr1 177708191 177708397 + 1.45399745587252 NA Intergenic Intergenic -21520 NM_027077 69428 Mm.84467 NM_027077 ENSMUSG00000015962 1700016C15Rik - RIKEN cDNA 1700016C15 gene protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-10 chr10 93771789 93771993 + 1.45399745587252 NA Intergenic Intergenic -59664 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-6 chr10 21608351 21608546 + 1.45399745587252 NA intron (NR_027968, intron 2 of 2) intron (NR_027968, intron 2 of 2) 15303 NR_027968 67692 Mm.54306 NM_183266 ENSMUSG00000050844 1700020N01Rik - RIKEN cDNA 1700020N01 gene ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-33 chr17 78350281 78350472 + 1.45399745587252 NA intron (NM_015800, intron 11 of 16) intron (NM_015800, intron 11 of 16) 67776 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-14 chr4 136138079 136138315 + 1.45399745587252 NA Intergenic Intergenic -5625 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-15 chr11 97303229 97303432 + 1.45399745587252 NA Intergenic Intergenic -12386 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-19 chr3 58306933 58307169 + 1.45399745587252 NA Intergenic Intergenic -107669 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-11 chr19 4920525 4920765 + 1.45399745587252 NA intron (NM_001360711, intron 6 of 17) intron (NM_001360711, intron 6 of 17) 7325 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-26 chr16 24512990 24513203 + 1.45399745587252 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -16218 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-54 chr7 110706541 110706729 + 1.45399745587252 NA Intergenic Intergenic -61571 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-49 chr6 92590100 92590336 + 1.45399745587252 NA intron (NM_001081146, intron 2 of 8) intron (NM_001081146, intron 2 of 8) -22852 NM_001134461 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-35 chr18 42883334 42883565 + 1.45399745587252 NA intron (NM_028392, intron 1 of 8) intron (NM_028392, intron 1 of 8) 16057 NR_073583 72930 Mm.26134 NM_027531 ENSMUSG00000024500 Ppp2r2b 2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-2 chr1 92079788 92079988 + 1.45399745587252 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 100453 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-21 chr14 43012236 43012438 + 1.45399745587252 NA intron (NM_001244671, intron 4 of 4).3 intron (NM_001244671, intron 4 of 4).3 3239 NM_001244671 100042055 Mm.429109 NM_001244671 ENSMUSG00000095226 Gm10377 - predicted gene 10377 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-26 chr4 155213471 155213675 + 1.45399745587252 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 8962 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-5 chr1 183914196 183914388 + 1.45399745587252 NA Intergenic Intergenic 119706 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-5 chr11 30178140 30178343 + 1.45399745587252 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 20016 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-30 chr17 12330324 12330519 + 1.45399745587252 NA Intergenic Intergenic 11568 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-29 chr17 6128746 6128953 + 1.45399745587252 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) -9299 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-18 chr7 141511466 141511675 + 1.45399745587252 NA intron (NM_026522, intron 8 of 10) intron (NM_026522, intron 8 of 10) 28287 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-38 chr19 43518399 43518606 + 1.45399745587252 NA intron (NM_010324, intron 1 of 8) intron (NM_010324, intron 1 of 8) 6103 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-42 chr3 143461913 143462166 + 1.45399745587252 NA Intergenic Intergenic 218984 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-23 chr4 129018373 129018571 + 1.45399745587252 NA Intergenic B2_Mm2|SINE|B2 25248 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-11 chr14 65090172 65090360 + 1.45399745587252 NA intron (NM_018788, intron 1 of 6) intron (NM_018788, intron 1 of 6) 7840 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-51 chr7 19317290 19317480 + 1.45399745587252 NA Intergenic B1_Mur3|SINE|Alu -7340 NM_001347586 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-3 chr10 67116481 67116705 + 1.45399745587252 NA Intergenic Intergenic -10665 NM_207221 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-24 chr15 90557627 90557831 + 1.45399745587252 NA intron (NM_001357979, intron 9 of 18) intron (NM_001357979, intron 9 of 18) 121659 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-13 chr4 35022145 35022346 + 1.45399745587252 NA intron (NM_178061, intron 2 of 3) intron (NM_178061, intron 2 of 3) -110764 NR_040652 73696 Mm.1361 NR_040652 ENSMUSG00000085824 Platr9 2410114N07Rik pluripotency associated transcript 9 ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-57 chr8 45531369 45531620 + 1.45399745587252 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) 23706 NM_001205219 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-14 chr17 35812030 35812251 + 1.45399745587252 NA Intergenic B3|SINE|B2 -9573 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-34 chr9 41469383 41469581 + 1.45399745587252 NA intron (NR_131928, intron 3 of 4) Tigger19a|DNA|TcMar-Tigger -5411 NR_131931 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-18 chr12 27996443 27996637 + 1.45399745587252 NA Intergenic Intergenic 551797 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-16 chr6 54131394 54131596 + 1.45399745587252 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) 91563 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-28 chr5 45473622 45473845 + 1.45399745587252 NA Intergenic Intergenic -19641 NM_024434 66988 Mm.286830 NM_024434 ENSMUSG00000039682 Lap3 2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps leucine aminopeptidase 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-52 chr7 63924323 63924540 + 1.45399745587252 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 7574 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-12 chr11 49609565 49609777 + 1.45399745587252 NA promoter-TSS (NM_008029) promoter-TSS (NM_008029) -8 NM_008029 14257 Mm.3291 NM_008029 ENSMUSG00000020357 Flt4 AI323512|Chy|Flt-4|VEGFR-3|VEGFR3 FMS-like tyrosine kinase 4 protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-6 chr11 119126013 119126212 + 1.45399745587252 NA Intergenic Intergenic 28025 NR_105899 102465563 NR_105899 ENSMUSG00000098704 Mir6934 Gm27523|mmu-mir-6934 microRNA 6934 ncRNA unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-58 chr8 94714428 94714628 + 1.45399745587252 NA Intergenic MIRb|SINE|MIR -18286 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-31 chr17 62468391 62468634 + 1.45399745587252 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 412805 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-7 chr10 95862278 95862564 + 1.45399745587252 NA Intergenic MIRb|SINE|MIR -78242 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-28 chr16 57573165 57573384 + 1.45399745587252 NA TTS (NM_001177871) TTS (NM_001177871) 24032 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-59 chr9 67630491 67630683 + 1.45399745587252 NA Intergenic Intergenic -70884 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-44 chr4 147868815 147869034 + 1.45399745587252 NA promoter-TSS (NM_010244) promoter-TSS (NM_010244) -55 NM_010244 14349 Mm.422607 NM_010244 ENSMUSG00000070583 Fv1 Fv-1|Rv-1|Rv1 Friend virus susceptibility 1 protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-20 chrX 152705078 152705285 + 1.45399745587252 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) -47287 NM_001359158 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-13 chr17 31898325 31898515 + 1.45399745587252 NA Intergenic Intergenic -42616 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-34 chr18 8129185 8129382 + 1.45399745587252 NA Intergenic Intergenic 259570 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252 chr15 34084229 34084567 + 1.45399745587252 NA intron (NM_001357925, intron 1 of 10) intron (NM_001357925, intron 1 of 10) 1679 NM_001357925 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-12 chr2 32095724 32095964 + 1.45399745587252 NA exon (NM_145521, exon 1 of 2) exon (NM_145521, exon 1 of 2) 316 NM_001355238 227721 Mm.257236 NM_145521 ENSMUSG00000051373 Plpp7 D830019K17Rik|NET39|Ppapdc3 phospholipid phosphatase 7 (inactive) protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-55 chr7 141522098 141522310 + 1.45399745587252 NA intron (NM_001142681, intron 8 of 12) intron (NM_001142681, intron 8 of 12) 17653 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-16 chr19 4052636 4052852 + 1.45399745587252 NA Intergenic Intergenic 6703 NM_144869 225884 Mm.440201 NM_144869 ENSMUSG00000058216 Gstp3 - glutathione S-transferase pi 3 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-36 chr18 46700033 46700231 + 1.45399745587252 NA Intergenic Intergenic 28370 NM_033037 12583 Mm.241056 NM_033037 ENSMUSG00000033022 Cdo1 1300002L19Rik|Cdo|D18Ucla3 cysteine dioxygenase 1, cytosolic protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-25 chr16 6891897 6892112 + 1.45399745587252 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -147366 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-36 chrX 74393420 74393611 + 1.45399745587252 NA promoter-TSS (NM_001313725) promoter-TSS (NM_001313725) 224 NM_001161423 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-29 chr5 77397285 77397515 + 1.45399745587252 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 10645 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-31 chr7 95854089 95854276 + 1.45399745587252 NA Intergenic Intergenic -317062 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-22 chr14 45834107 45834295 + 1.45399745587252 NA Intergenic Intergenic -176058 NM_001042719 114874 Mm.121918 NM_176845 ENSMUSG00000037697 Ddhd1 Mir5131|PA-PLA1 DDHD domain containing 1 protein-coding unique_peak2_1_7_-2.24879501706247_1.87560249146876_1.45399745587252-19 chr8 15056826 15057032 + 1.45399745587252 NA promoter-TSS (NM_008664) promoter-TSS (NM_008664) -724 NM_008664 17930 Mm.272115 NM_008664 ENSMUSG00000031461 Myom2 AW146149 myomesin 2 protein-coding unique_peak1_7_2_1.15213252306988_2.1610287622561_1.45399745587252-6 chr10 68142829 68143044 + 1.45399745587252 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 135790 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_8_2_1.32085870709804_2.24539185427017_1.45399745587252-13 chr11 54252387 54252580 + 1.45399745587252 NA Intergenic Intergenic -2584 NM_009969 12981 Mm.4922 NM_009969 ENSMUSG00000018916 Csf2 CSF|Csfgm|GMCSF|Gm-CSf|MGI-IGM colony stimulating factor 2 (granulocyte-macrophage) protein-coding common_peak1_181_111_0.405732342825151_7.01022109347018_1.45274449936362 chr15 41722576 41724766 + 1.45274449936362 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -65324 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_137_81_0.459081919832381_6.58709296453427_1.45246419080954 chr14 24244619 24246032 + 1.45246419080954 NA exon (NM_027726, exon 1 of 31) exon (NM_027726, exon 1 of 31) 595 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding common_peak1_197_205_-0.352708899704493_7.51014607733097_1.45243871188446 chr1 132291186 132292512 + 1.45243871188446 NA Intergenic Intergenic -6777 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_48_22_0.809796187309042_4.92846004971153_1.45230360914611 chr1 186444901 186445456 + 1.45230360914611 NA Intergenic Intergenic 113503 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611-7 chr5 107868286 107868931 + 1.45230360914611 NA intron (NM_007964, intron 1 of 17) CpG 6499 NM_007964 14020 Mm.35796 NM_007964 ENSMUSG00000011831 Evi5 NB4S ecotropic viral integration site 5 protein-coding common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611 chr1 93173976 93174503 + 1.45230360914611 NA intron (NM_001310428, intron 1 of 31) intron (NM_001310428, intron 1 of 31) 5816 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding common_peak2_47_22_0.780258710814993_4.91369131146451_1.45230360914611 chr16 45870789 45871537 + 1.45230360914611 NA Intergenic Intergenic -26412 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611 chr8 64520114 64520842 + 1.45230360914611 NA Intergenic Intergenic -6037 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611-4 chr2 73312871 73313441 + 1.45230360914611 NA promoter-TSS (NM_025854) promoter-TSS (NM_025854) 504 NM_001355711 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding unique_peak1_48_22_0.809796187309042_4.92846004971153_1.45230360914611 chr5 91720254 91720834 + 1.45230360914611 NA Intergenic Intergenic 46756 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA common_peak2_48_22_0.809796187309042_4.92846004971153_1.45230360914611-3 chr9 94692112 94692640 + 1.45230360914611 NA intron (NM_177909, intron 2 of 15) intron (NM_177909, intron 2 of 15) 22484 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak2_26_40_-0.877950174144681_4.91857691754574_1.45230360914611-3 chr7 130574716 130575265 + 1.45230360914611 NA Intergenic Intergenic -2494 NM_001004468 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611-2 chr11 57707635 57708360 + 1.45230360914611 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) -58503 NR_153850 78762 Mm.362149 NR_153850 4933424L21Rik - RIKEN cDNA 4933424L21 gene ncRNA common_peak2_26_40_-0.877950174144681_4.91857691754574_1.45230360914611-2 chr5 15934809 15935329 + 1.45230360914611 NA exon (NM_001110844, exon 1 of 39) exon (NM_001110844, exon 1 of 39) 378 NM_001110844 12293 Mm.159842 NM_009784 ENSMUSG00000040118 Cacna2d1 Ca(v)alpha2delta1|Cacna2|Cchl2a calcium channel, voltage-dependent, alpha2/delta subunit 1 protein-coding common_peak2_47_22_0.780258710814993_4.91369131146451_1.45230360914611-2 chr6 146903907 146904327 + 1.45230360914611 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 15623 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611-6 chr3 105800668 105801255 + 1.45230360914611 NA intron (NM_145541, intron 1 of 7) CpG 420 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein 1a protein-coding common_peak1_48_22_0.809796187309042_4.92846004971153_1.45230360914611-2 chr18 6135396 6135885 + 1.45230360914611 NA intron (NM_001039692, intron 1 of 18) CpG 458 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611-5 chr2 152683707 152684031 + 1.45230360914611 NA 3' UTR (NM_001159553, exon 3 of 3) 3' UTR (NM_001159553, exon 3 of 3) -3279 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding common_peak1_48_22_0.809796187309042_4.92846004971153_1.45230360914611-3 chr3 155093590 155093934 + 1.45230360914611 NA promoter-TSS (NM_029330) promoter-TSS (NM_029330) 328 NM_028938 74435 Mm.195711 NM_028938 ENSMUSG00000028182 Lrriq3 4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|Lrrc44 leucine-rich repeats and IQ motif containing 3 protein-coding common_peak2_48_22_0.809796187309042_4.92846004971153_1.45230360914611-2 chr5 134963277 134963612 + 1.45230360914611 NA Intergenic B1_Mus1|SINE|Alu -16510 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding common_peak2_26_40_-0.877950174144681_4.91857691754574_1.45230360914611 chr1 186604545 186605124 + 1.45230360914611 NA Intergenic Intergenic -46153 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_47_22_0.780258710814993_4.91369131146451_1.45230360914611-3 chr12 85956413 85957111 + 1.45230360914611 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 122279 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_48_22_0.809796187309042_4.92846004971153_1.45230360914611 chr14 75284440 75284812 + 1.45230360914611 NA 5' UTR (NM_026083, exon 1 of 19) 5' UTR (NM_026083, exon 1 of 19) 253 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding common_peak1_52_25_0.745330337128769_5.07310488670548_1.45193041780123-2 chr8 122179118 122179671 + 1.45193041780123 NA Intergenic Intergenic -102747 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123-3 chr17 45752714 45753391 + 1.45193041780123 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 18546 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak2_29_44_-0.861320551130546_5.0611928207644_1.45193041780123 chr1 16216909 16217648 + 1.45193041780123 NA Intergenic Intergenic 111396 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_52_25_0.745330337128769_5.07310488670548_1.45193041780123-2 chr8 125083528 125084159 + 1.45193041780123 NA intron (NM_174854, intron 1 of 12) intron (NM_174854, intron 1 of 12) 29648 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak2_52_25_0.745330337128769_5.07310488670548_1.45193041780123 chr3 87617628 87617974 + 1.45193041780123 NA 5' UTR (NM_001003912, exon 1 of 40) 5' UTR (NM_001003912, exon 1 of 40) 242 NM_001360195 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding common_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123-4 chr2 4401139 4401749 + 1.45193041780123 NA 5' UTR (NM_001177843, exon 1 of 24) 5' UTR (NM_001177843, exon 1 of 24) 468 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_52_25_0.745330337128769_5.07310488670548_1.45193041780123 chr4 155803478 155804079 + 1.45193041780123 NA intron (NM_025570, intron 2 of 4) CpG 900 NM_025570 66448 Mm.23825 NM_025570 ENSMUSG00000029066 Mrpl20 2610008D01Rik|4930425I20Rik mitochondrial ribosomal protein L20 protein-coding common_peak1_52_25_0.745330337128769_5.07310488670548_1.45193041780123-3 chrX 94121018 94121762 + 1.45193041780123 NA intron (NM_001358356, intron 1 of 8) intron (NM_001358356, intron 1 of 8) 2017 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak1_52_25_0.745330337128769_5.07310488670548_1.45193041780123 chr6 100721054 100721690 + 1.45193041780123 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 16638 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123-5 chr4 21879784 21880446 + 1.45193041780123 NA intron (NM_001356348, intron 1 of 6) CpG 262 NM_001356348 230027 Mm.5662 NM_172687 ENSMUSG00000028247 Coq3 4732433J24|C77934 coenzyme Q3 methyltransferase protein-coding unique_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123-2 chr18 77794426 77795280 + 1.45193041780123 NA non-coding (NR_152167, exon 3 of 3) non-coding (NR_152167, exon 3 of 3) 303 NM_013831 19201 Mm.57174 NM_013831 ENSMUSG00000025429 Pstpip2 MAYP|cmo proline-serine-threonine phosphatase-interacting protein 2 protein-coding common_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123 chr10 81643163 81643656 + 1.45193041780123 NA exon (NM_027480, exon 17 of 20) exon (NM_027480, exon 17 of 20) -5660 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 - predicted gene 10778 protein-coding common_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123-2 chr17 3596683 3597111 + 1.45193041780123 NA Intergenic Intergenic 39073 NR_045302 68230 Mm.431352 NR_045302 1700102H20Rik - RIKEN cDNA 1700102H20 gene ncRNA unique_peak1_53_25_0.772107132759068_5.08649328452063_1.45193041780123 chr10 60571669 60572333 + 1.45193041780123 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 124489 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-28 chr17 75094339 75094674 + 1.45089835786865 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -84275 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-6 chr1 132281288 132281492 + 1.45089835786865 NA Intergenic Intergenic -17236 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-51 chr3 37359087 37359297 + 1.45089835786865 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 10539 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-2 chr1 64117574 64117792 + 1.45089835786865 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 3706 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-15 chr11 104607622 104607915 + 1.45089835786865 NA promoter-TSS (NM_016780) promoter-TSS (NM_016780) -232 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-14 chr13 18789595 18789856 + 1.45089835786865 NA intron (NM_172120, intron 5 of 28) intron (NM_172120, intron 5 of 28) 72433 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-70 chr8 32183818 32184057 + 1.45089835786865 NA Intergenic Intergenic 32042 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-38 chr19 6341367 6341597 + 1.45089835786865 NA TTS (NM_001168488) TTS (NM_001168488) 322 NR_117093 26412 Mm.25860 NM_009006 ENSMUSG00000024948 Map4k2 AI385662|BL44|GCK|Rab8ip mitogen-activated protein kinase kinase kinase kinase 2 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865 chr1 134332665 134332905 + 1.45089835786865 NA 5' UTR (NM_001144855, exon 1 of 29) 5' UTR (NM_001144855, exon 1 of 29) 143 NM_001144855 68507 Mm.295105 NM_001144855 ENSMUSG00000026458 Ppfia4 100042382|1110008G13Rik|AI448359|AI852265|C81506|Gm3812 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-5 chr11 55406397 55406662 + 1.45089835786865 NA exon (NM_001290817, exon 4 of 10) exon (NM_001290817, exon 4 of 10) 13551 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-29 chr6 32796259 32796486 + 1.45089835786865 NA intron (NM_001355667, intron 8 of 8) intron (NM_001355667, intron 8 of 8) -208180 NM_175750 243743 Mm.444029 NM_175750 ENSMUSG00000029765 Plxna4 9330117B14|Plxa4|mKIAA1550 plexin A4 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-46 chr2 148274154 148274464 + 1.45089835786865 NA Intergenic Intergenic -121068 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-18 chr14 28968495 28968684 + 1.45089835786865 NA intron (NM_009785, intron 31 of 37) intron (NM_009785, intron 31 of 37) -49619 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-16 chr18 62476872 62477080 + 1.45089835786865 NA Intergenic Intergenic 66876 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-24 chr3 122033321 122033607 + 1.45089835786865 NA Intergenic Intergenic -10996 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-25 chr15 10683650 10684075 + 1.45089835786865 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 29678 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-36 chr8 25109073 25109311 + 1.45089835786865 NA intron (NR_155282, intron 1 of 1) intron (NR_155282, intron 1 of 1) 7013 NR_155282 74744 Mm.117802 NR_155282 5830408C22Rik 2700026D01Rik RIKEN cDNA 5830408C22 gene ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-64 chr4 117933947 117934264 + 1.45089835786865 NA intron (NM_001285520, intron 11 of 11) intron (NM_001285520, intron 11 of 11) -4342 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-33 chr18 8161025 8161314 + 1.45089835786865 NA Intergenic Intergenic 291456 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak2_13_6_0.731399151307565_3.17305449771139_1.45089835786865-2 chr3 121469820 121470077 + 1.45089835786865 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 43407 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-72 chr6 17549912 17550172 + 1.45089835786865 NA intron (NM_008591, intron 15 of 21) intron (NM_008591, intron 15 of 21) 86085 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-40 chr19 40366208 40366484 + 1.45089835786865 NA intron (NM_001034963, intron 6 of 22) intron (NM_001034963, intron 6 of 22) 35964 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-43 chr9 69332467 69332773 + 1.45089835786865 NA intron (NM_001289916, intron 1 of 9) intron (NM_001289916, intron 1 of 9) 31627 NR_136934 102642202 Mm.415363 NR_136934 ENSMUSG00000086648 Gm15511 - predicted gene 15511 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-55 chr3 96500715 96500939 + 1.45089835786865 NA Intergenic Intergenic -24358 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-26 chr15 12348564 12348768 + 1.45089835786865 NA intron (NM_025673, intron 3 of 3) B1_Mus1|SINE|Alu 27170 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-41 chr2 26638968 26639189 + 1.45089835786865 NA TTS (NR_028571) TTS (NR_028571) 243 NR_028571 100306954 Mm.491822 NR_028571 ENSMUSG00000077192 Snora17 ACA17 small nucleolar RNA, H/ACA box 17 snoRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-33 chr18 53417318 53417528 + 1.45089835786865 NA intron (NM_008908, intron 1 of 4) intron (NM_008908, intron 1 of 4) 584 NM_008908 19038 Mm.4587 NM_008908 ENSMUSG00000024538 Ppic CyP-20c peptidylprolyl isomerase C protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-15 chr13 37846645 37846889 + 1.45089835786865 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 19374 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-33 chr7 114205659 114205879 + 1.45089835786865 NA Intergenic Intergenic 48911 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-56 chr3 98111736 98111997 + 1.45089835786865 NA intron (NM_010928, intron 13 of 33) intron (NM_010928, intron 13 of 33) -48768 NM_027665 71078 Mm.50711 NM_027665 ENSMUSG00000043468 Adam30 4933424D07Rik|svph4 a disintegrin and metallopeptidase domain 30 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-68 chr8 11798696 11798887 + 1.45089835786865 NA intron (NM_017402, intron 5 of 19) intron (NM_017402, intron 5 of 19) 40461 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-39 chr2 130451038 130451273 + 1.45089835786865 NA intron (NM_001355161, intron 1 of 21) intron (NM_001355161, intron 1 of 21) 877 NM_001355161 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-52 chr3 63893521 63893757 + 1.45089835786865 NA Intergenic Intergenic 35159 NM_001357824 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-57 chr5 146272437 146272687 + 1.45089835786865 NA intron (NM_153599, intron 4 of 12) intron (NM_153599, intron 4 of 12) 41312 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-34 chr18 31608778 31608974 + 1.45089835786865 NA intron (NM_001357461, intron 1 of 7) intron (NM_001357461, intron 1 of 7) 1054 NM_026165 67453 Mm.23896 NM_026165 ENSMUSG00000024259 Slc25a46 1200007B05Rik|AI325987 solute carrier family 25, member 46 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-14 chr11 102996718 102996985 + 1.45089835786865 NA intron (NM_026551, intron 4 of 4) B1_Mus1|SINE|Alu 3070 NR_105896 102466988 NR_105896 ENSMUSG00000098613 Mir6931 Gm27303|mmu-mir-6931 microRNA 6931 ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-73 chr8 69919992 69920200 + 1.45089835786865 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -17538 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-2 chr12 111040224 111040493 + 1.45089835786865 NA intron (NM_198023, intron 2 of 11) intron (NM_198023, intron 2 of 11) 560 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-13 chr11 97188317 97188521 + 1.45089835786865 NA promoter-TSS (NM_008379) promoter-TSS (NM_008379) -527 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-48 chr2 181521735 181522019 + 1.45089835786865 NA intron (NM_001271584, intron 2 of 5) intron (NM_001271584, intron 2 of 5) 1392 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-27 chr15 98761380 98761575 + 1.45089835786865 NA intron (NM_007478, intron 1 of 4) intron (NM_007478, intron 1 of 4) 1515 NM_001355510 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-10 chr13 115088903 115089145 + 1.45089835786865 NA intron (NM_134058, intron 1 of 1) intron (NM_134058, intron 1 of 1) 1134 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota mRNA surveillance and ribosome rescue factor protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-20 chr2 116064667 116064950 + 1.45089835786865 NA promoter-TSS (NM_001346044) promoter-TSS (NM_001346044) -189 NM_001159570 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-16 chr13 52656399 52656626 + 1.45089835786865 NA Intergenic Intergenic 59630 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-4 chr11 54067220 54067427 + 1.45089835786865 NA intron (NM_019417, intron 1 of 6) intron (NM_019417, intron 1 of 6) 1694 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-18 chr13 51851640 51851847 + 1.45089835786865 NA Intergenic Intergenic 5068 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-65 chr7 113170066 113170302 + 1.45089835786865 NA Intergenic Intergenic -28169 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-63 chr4 89372139 89372377 + 1.45089835786865 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -61226 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-29 chr17 75275058 75275284 + 1.45089835786865 NA intron (NM_001331235, intron 7 of 29) intron (NM_001331235, intron 7 of 29) 96390 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-8 chr13 42368138 42368351 + 1.45089835786865 NA Intergenic Intergenic 66768 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-2 chr17 34437837 34438069 + 1.45089835786865 NA intron (NM_001001177, intron 6 of 19) intron (NM_001001177, intron 6 of 19) 37984 NM_030746 632126 Mm.484958 NM_030746 ENSMUSG00000058435 Btnl4 Btn3a3|EG632126|NG11 butyrophilin-like 4 protein-coding common_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-5 chr3 151118533 151118970 + 1.45089835786865 NA Intergenic Intergenic -94889 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-5 chr1 93511638 93511927 + 1.45089835786865 NA promoter-TSS (NM_145519) promoter-TSS (NM_145519) -322 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-17 chr12 102304019 102304257 + 1.45089835786865 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 20497 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-11 chr14 41980355 41980590 + 1.45089835786865 NA Intergenic Intergenic 55523 NM_001358038 666214 NM_001358038 1700049E17Rik1 1700049E17Rik RIKEN cDNA 1700049E17 gene, gene 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-18 chr2 27811332 27811559 + 1.45089835786865 NA Intergenic Intergenic -74980 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-3 chr11 16779725 16780021 + 1.45089835786865 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 27670 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-7 chr9 47608207 47608449 + 1.45089835786865 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 77976 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865 chr14 117931720 117931933 + 1.45089835786865 NA intron (NM_001079844, intron 7 of 9) intron (NM_001079844, intron 7 of 9) 22021 NR_105747 102465148 NR_105747 ENSMUSG00000098648 Mir6239 Gm28025|mmu-mir-6239 microRNA 6239 ncRNA common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-4 chr2 137431439 137431649 + 1.45089835786865 NA Intergenic Intergenic -315024 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-60 chr6 92942195 92942408 + 1.45089835786865 NA intron (NR_015530, intron 1 of 2) intron (NR_015530, intron 1 of 2) 1719 NR_015530 330385 Mm.483472 NR_015530 ENSMUSG00000097462 9530026P05Rik B430306B02 RIKEN cDNA 9530026P05 gene ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-26 chr5 66547096 66547349 + 1.45089835786865 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 71595 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-22 chr3 87987277 87987500 + 1.45089835786865 NA TTS (NM_007529) TTS (NM_007529) 12968 NM_007529 12032 Mm.4598 NM_007529 ENSMUSG00000004892 Bcan Cspg7 brevican protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-8 chr10 88390326 88390539 + 1.45089835786865 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 11020 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-54 chr5 134990710 134991011 + 1.45089835786865 NA intron (NR_026907, intron 3 of 4) intron (NR_026907, intron 3 of 4) 4646 NM_009902 12739 Mm.158662 NM_009902 ENSMUSG00000070473 Cldn3 AI182374|Cpetr2|mRVP1 claudin 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-42 chr2 167821222 167821412 + 1.45089835786865 NA Intergenic Intergenic -111010 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-12 chr11 117654191 117654518 + 1.45089835786865 NA promoter-TSS (NM_198022) promoter-TSS (NM_198022) 65 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-26 chr16 57754886 57755184 + 1.45089835786865 NA promoter-TSS (NM_007739) promoter-TSS (NM_007739) -298 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-73 chr6 54203914 54204284 + 1.45089835786865 NA intron (NM_001163640, intron 3 of 12) Plat_L3|LINE|CR1 -60759 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-36 chr18 75446133 75446464 + 1.45089835786865 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -68347 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-63 chr7 89581723 89581969 + 1.45089835786865 NA Intergenic Intergenic -50972 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-84 chr9 48985512 48985800 + 1.45089835786865 NA intron (NM_001359739, intron 1 of 24) CpG 271 NM_175482 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-28 chr5 140609077 140609285 + 1.45089835786865 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 1840 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-67 chr7 130947437 130947701 + 1.45089835786865 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 11366 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-28 chr16 26607787 26607993 + 1.45089835786865 NA intron (NR_152416, intron 1 of 12) intron (NR_152416, intron 1 of 12) 26185 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-65 chr4 120813953 120814200 + 1.45089835786865 NA intron (NM_001048168, intron 1 of 9) intron (NM_001048168, intron 1 of 9) 1637 NM_001357192 18046 Mm.318389 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-64 chr7 102065658 102065880 + 1.45089835786865 NA promoter-TSS (NM_001360748) promoter-TSS (NM_001360748) 278 NM_001286689 102443350 Mm.292904 NM_001286689 ENSMUSG00000099481 Xndc1 Xndr Xrcc1 N-terminal domain containing 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-31 chr17 88544663 88544908 + 1.45089835786865 NA intron (NM_028658, intron 2 of 21) intron (NM_028658, intron 2 of 21) 14661 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-9 chr11 99080809 99081007 + 1.45089835786865 NA intron (NM_172564, intron 2 of 12) intron (NM_172564, intron 2 of 12) 8398 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-78 chr6 147505997 147506205 + 1.45089835786865 NA intron (NM_001355715, intron 2 of 14) intron (NM_001355715, intron 2 of 14) 29736 NM_001355713 67015 Mm.209774 NM_025911 ENSMUSG00000030301 Ccdc91 1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56 coiled-coil domain containing 91 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-38 chr8 35661526 35661746 + 1.45089835786865 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -72616 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-20 chr13 100669763 100669986 + 1.45089835786865 NA intron (NM_001168386, intron 1 of 9) CpG 393 NM_001168386 76041 Mm.23977 NM_183115 ENSMUSG00000048924 Ccdc125 5830436D01Rik|AL023012 coiled-coil domain containing 125 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-13 chr12 111426442 111426653 + 1.45089835786865 NA intron (NM_001289487, intron 9 of 13) intron (NM_001289487, intron 9 of 13) 9102 NM_001289488 74190 Mm.248640 NM_028807 ENSMUSG00000021280 Exoc3l4 1200009I06Rik|1600013K19Rik exocyst complex component 3-like 4 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-71 chr8 34049126 34049458 + 1.45089835786865 NA Intergenic Intergenic 58522 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-74 chr6 91372801 91373020 + 1.45089835786865 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 38459 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-37 chr18 82534047 82534354 + 1.45089835786865 NA intron (NM_001025245, intron 3 of 3) intron (NM_001025245, intron 3 of 3) -20263 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-27 chr17 24708068 24708263 + 1.45089835786865 NA promoter-TSS (NM_145396) promoter-TSS (NM_145396) -512 NM_145396 213773 Mm.100353 NM_145396 ENSMUSG00000040688 Tbl3 9430070M15Rik transducin (beta)-like 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-16 chr12 17761910 17762186 + 1.45089835786865 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 71239 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-7 chr10 23338917 23339203 + 1.45089835786865 NA intron (NM_010167, intron 1 of 18) intron (NM_010167, intron 1 of 18) 10830 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-17 chr13 67107796 67108024 + 1.45089835786865 NA intron (NM_001256052, intron 3 of 6) intron (NM_001256052, intron 3 of 6) 6118 NM_001256052 432770 Mm.124021 NM_001256052 ENSMUSG00000074824 Rslcan18 mszf51 regulator of sex-limitation candidate 18 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-29 chr16 37939871 37940119 + 1.45089835786865 NA intron (NM_153394, intron 1 of 9) intron (NM_153394, intron 1 of 9) 23499 NM_153394 239845 Mm.228018 NM_153394 ENSMUSG00000046961 Gpr156 Gababl G protein-coupled receptor 156 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-35 chr8 11398919 11399143 + 1.45089835786865 NA intron (NM_009932, intron 5 of 47) intron (NM_009932, intron 5 of 47) -78898 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-40 chr2 137453733 137453949 + 1.45089835786865 NA Intergenic Intergenic -337321 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-70 chr5 125048287 125048516 + 1.45089835786865 NA exon (NM_001253904, exon 21 of 48) exon (NM_001253904, exon 21 of 48) 44926 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-39 chr19 23758460 23758676 + 1.45089835786865 NA promoter-TSS (NM_177034) promoter-TSS (NM_177034) -308 NM_177034 319924 Mm.22879 NM_177034 ENSMUSG00000024897 Apba1 6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha amyloid beta (A4) precursor protein binding, family A, member 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-49 chr3 30998681 30998975 + 1.45089835786865 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 3057 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-83 chr8 89015757 89015955 + 1.45089835786865 NA Intergenic Intergenic -8879 NR_106190 102465899 NR_106190 ENSMUSG00000099078 Mir8110 Gm27571|mmu-mir-8110 microRNA 8110 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-61 chr4 63529085 63529382 + 1.45089835786865 NA Intergenic Intergenic -15532 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak2_13_6_0.731399151307565_3.17305449771139_1.45089835786865 chr2 137726463 137726667 + 1.45089835786865 NA Intergenic Intergenic -530019 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-50 chr3 36448926 36449205 + 1.45089835786865 NA 3' UTR (NM_009673, exon 13 of 13) 3' UTR (NM_009673, exon 13 of 13) 26459 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-71 chr5 146792327 146792619 + 1.45089835786865 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 2483 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-32 chr18 7121895 7122103 + 1.45089835786865 NA intron (NM_001357492, intron 20 of 20) intron (NM_001357492, intron 20 of 20) -117220 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-80 chr7 133089229 133089464 + 1.45089835786865 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -7486 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-56 chr5 144360809 144361107 + 1.45089835786865 NA TTS (NR_102374) TTS (NR_102374) 2433 NR_102373 100579137 NR_102372 ENSMUSG00000104600 Dmrt1i Dmr Dmrt1 interacting ncRNA ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-13 chr15 64532598 64532883 + 1.45089835786865 NA Intergenic Intergenic -149821 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-11 chr11 49243583 49243955 + 1.45089835786865 NA promoter-TSS (NM_010794) promoter-TSS (NM_010794) -422 NM_010794 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-6 chr11 61561501 61561733 + 1.45089835786865 NA intron (NM_001252189, intron 1 of 8) intron (NM_001252189, intron 1 of 8) 18070 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-42 chr9 62624566 62624805 + 1.45089835786865 NA Intergenic Intergenic -53170 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-66 chr7 118488007 118488209 + 1.45089835786865 NA 3' UTR (NM_001033380, exon 1 of 1) 3' UTR (NM_001033380, exon 1 of 1) 3867 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-42 chr2 102935390 102935590 + 1.45089835786865 NA Intergenic Intergenic -33825 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-68 chr5 96806391 96806686 + 1.45089835786865 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 13153 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-30 chr6 102115123 102115392 + 1.45089835786865 NA Intergenic Intergenic -150843 NR_131018 75893 Mm.2968 NR_131017 ENSMUSG00000107563 4930587E11Rik 4930523E13Rik|Gm44188 RIKEN cDNA 4930587E11 gene ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-32 chr7 110772409 110772639 + 1.45089835786865 NA promoter-TSS (NM_009667) promoter-TSS (NM_009667) -80 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-44 chr3 79908580 79908920 + 1.45089835786865 NA exon (NM_133187, exon 2 of 4) exon (NM_133187, exon 2 of 4) 22820 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-52 chr5 113765447 113765679 + 1.45089835786865 NA intron (NR_151532, intron 1 of 16) intron (NR_151532, intron 1 of 16) 6837 NR_151532 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-38 chr2 119799890 119800118 + 1.45089835786865 NA intron (NM_019392, intron 1 of 18) CpG 490 NM_019392 22174 Mm.2901 NM_019392 ENSMUSG00000027298 Tyro3 AI323366|Brt|Dtk|Etk-2|Rse|Sky|TK19-2|Tif|etk2/tyro3|tk19-1 TYRO3 protein tyrosine kinase 3 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-3 chr1 75337135 75337372 + 1.45089835786865 NA Intergenic Intergenic -19616 NM_001110831 13437 Mm.24680 NM_016878 ENSMUSG00000026209 Dnpep AA407814 aspartyl aminopeptidase protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-69 chr8 12754649 12754855 + 1.45089835786865 NA Intergenic Intergenic -2264 NM_015804 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-21 chr14 45921029 45921319 + 1.45089835786865 NA Intergenic Intergenic -162853 NR_002875 218963 Mm.282093 NR_002875 Gm1821 - ubiquitin pseudogene pseudo unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-76 chr6 112946186 112946501 + 1.45089835786865 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 923 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-3 chr13 119144557 119144756 + 1.45089835786865 NA Intergenic PB1D10|SINE|Alu 264355 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-6 chr8 31803900 31804112 + 1.45089835786865 NA Intergenic Intergenic 114197 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-85 chr9 53609955 53610166 + 1.45089835786865 NA intron (NM_144784, intron 1 of 11) intron (NM_144784, intron 1 of 11) 290 NM_144784 110446 Mm.293233 NM_144784 ENSMUSG00000032047 Acat1 6330585C21Rik|Acat acetyl-Coenzyme A acetyltransferase 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-19 chr14 33318084 33318380 + 1.45089835786865 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 92792 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-48 chr4 141283276 141283467 + 1.45089835786865 NA Intergenic Intergenic 4932 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-37 chr2 75702364 75702652 + 1.45089835786865 NA intron (NR_132727, intron 1 of 1) intron (NR_132727, intron 1 of 1) 2155 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-41 chr2 163341224 163341411 + 1.45089835786865 NA intron (NM_021566, intron 3 of 5) intron (NM_021566, intron 3 of 5) 56656 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-8 chr11 76671745 76671976 + 1.45089835786865 NA promoter-TSS (NM_177182) promoter-TSS (NM_177182) -610 NM_177182 320522 Mm.131585 NM_177182 ENSMUSG00000044243 Bhlha9 A830053O21Rik|Fingerin basic helix-loop-helix family, member a9 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-59 chr3 121714659 121714922 + 1.45089835786865 NA Intergenic Intergenic -8747 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-2 chr1 64950144 64950372 + 1.45089835786865 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 6566 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-62 chr7 75861279 75861466 + 1.45089835786865 NA intron (NM_029652, intron 1 of 2) intron (NM_029652, intron 1 of 2) 13034 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-19 chr13 52711799 52711998 + 1.45089835786865 NA Intergenic Intergenic 45307 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-21 chr3 61345967 61346259 + 1.45089835786865 NA Intergenic Intergenic -18394 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865 chr1 40541671 40541973 + 1.45089835786865 NA intron (NM_010553, intron 9 of 12) intron (NM_010553, intron 9 of 12) 26460 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-10 chr11 100968909 100969114 + 1.45089835786865 NA intron (NM_001359105, intron 1 of 1) intron (NM_001359105, intron 1 of 1) 1604 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-12 chr14 87140612 87140887 + 1.45089835786865 NA intron (NM_019670, intron 1 of 27) intron (NM_019670, intron 1 of 27) 475 NM_019670 56419 Mm.440585 NM_019670 ENSMUSG00000022021 Diaph3 4930417P13Rik|Dia2|Diap3|Drf3|p134MDia2 diaphanous related formin 3 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-82 chr8 25442035 25442262 + 1.45089835786865 NA Intergenic Intergenic -76611 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-30 chr17 84575106 84575326 + 1.45089835786865 NA exon (NM_177606, exon 13 of 30) exon (NM_177606, exon 13 of 30) -51283 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-10 chr10 93354589 93354817 + 1.45089835786865 NA Intergenic Intergenic 18492 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-9 chr13 42558212 42558491 + 1.45089835786865 NA Intergenic Intergenic -122448 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-77 chr9 102836280 102836520 + 1.45089835786865 NA intron (NM_001284258, intron 1 of 13) intron (NM_001284258, intron 1 of 13) 1480 NM_001284258 20187 Mm.335391 NM_013649 ENSMUSG00000032547 Ryk AW536699|ERK-3|Vik receptor-like tyrosine kinase protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-23 chr15 31250342 31250606 + 1.45089835786865 NA intron (NM_146057, intron 2 of 3) B3|SINE|B2 26089 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-45 chr4 43391738 43392048 + 1.45089835786865 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) 9911 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-34 chr18 57029273 57029461 + 1.45089835786865 NA Intergenic Intergenic -53988 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-53 chr5 123979364 123979577 + 1.45089835786865 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 5842 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-30 chr16 43702531 43702734 + 1.45089835786865 NA Intergenic Intergenic -38448 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-7 chr11 50228711 50228971 + 1.45089835786865 NA intron (NM_145926, intron 1 of 14) intron (NM_145926, intron 1 of 14) -3404 NR_105884 102466765 NR_105884 ENSMUSG00000098474 Mir6919 Gm27889|mmu-mir-6919 microRNA 6919 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-67 chr5 92953973 92954270 + 1.45089835786865 NA intron (NM_001077596, intron 7 of 9) intron (NM_001077596, intron 7 of 9) 56128 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-61 chr6 112257278 112257570 + 1.45089835786865 NA Intergenic Intergenic -16334 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-60 chr3 126276200 126276449 + 1.45089835786865 NA Intergenic Intergenic -87528 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-49 chr5 21495335 21495552 + 1.45089835786865 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -48084 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-21 chr14 65358839 65359102 + 1.45089835786865 NA intron (NM_199029, intron 1 of 9) CpG 294 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-44 chr2 131909317 131909641 + 1.45089835786865 NA promoter-TSS (NM_011170) promoter-TSS (NM_011170) -449 NM_011170 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-40 chr8 119988600 119988809 + 1.45089835786865 NA Intergenic Intergenic -3734 NM_030209 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-11 chr11 109817181 109817443 + 1.45089835786865 NA intron (NM_027038, intron 1 of 4) intron (NM_027038, intron 1 of 4) 10734 NM_027038 69324 Mm.31700 NM_027038 ENSMUSG00000020617 1700012B07Rik 1700069D21Rik RIKEN cDNA 1700012B07 gene protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-25 chr15 78796191 78796381 + 1.45089835786865 NA intron (NM_130859, intron 4 of 20) intron (NM_130859, intron 4 of 20) 6756 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-20 chr14 55014872 55015093 + 1.45089835786865 NA promoter-TSS (NM_026890) promoter-TSS (NM_026890) -472 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-23 chr3 101591999 101592260 + 1.45089835786865 NA intron (NM_144900, intron 4 of 22) intron (NM_144900, intron 4 of 22) 12578 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-45 chr2 144594174 144594383 + 1.45089835786865 NA intron (NM_001033297, intron 1 of 1) intron (NM_001033297, intron 1 of 1) 213 NM_001033297 228715 Mm.27391 NM_001033297 ENSMUSG00000074754 Smim26 Gm561 small integral membrane protein 26 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-35 chr18 67386096 67386330 + 1.45089835786865 NA Intergenic Intergenic -4518 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-15 chr18 53249369 53249631 + 1.45089835786865 NA intron (NM_029394, intron 1 of 6) YREP_Mm|Unknown|Unknown 3838 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-9 chr10 91159690 91160055 + 1.45089835786865 NA TTS (NM_011605) TTS (NM_011605) 10678 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-50 chr5 35619258 35619521 + 1.45089835786865 NA Intergenic Intergenic -30626 NR_045807 74364 Mm.473123 NM_175208 ENSMUSG00000055061 4931431C16Rik - RIKEN cDNA 4931431C16 gene ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-24 chr15 53679356 53679589 + 1.45089835786865 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -65193 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-2 chr11 67532339 67532537 + 1.45089835786865 NA promoter-TSS (NM_008088) promoter-TSS (NM_008088) -560 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-37 chr8 34787875 34788087 + 1.45089835786865 NA Intergenic Intergenic -19629 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-39 chr8 103463403 103463716 + 1.45089835786865 NA Intergenic Intergenic -116025 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-35 chr18 77954808 77955165 + 1.45089835786865 NA intron (NM_001195633, intron 5 of 43) B3|SINE|B2 16519 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-81 chr7 144752231 144752477 + 1.45089835786865 NA Intergenic Intergenic -13762 NM_001242349 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-66 chr4 137704331 137704535 + 1.45089835786865 NA intron (NM_001081155, intron 3 of 24) intron (NM_001081155, intron 3 of 24) 2173 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-6 chr11 31479563 31479788 + 1.45089835786865 NA Intergenic Intergenic -109614 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-77 chr6 113102400 113102680 + 1.45089835786865 NA intron (NM_028385, intron 1 of 21) intron (NM_028385, intron 1 of 21) -2395 NM_173005 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865 chr10 60934798 60935095 + 1.45089835786865 NA intron (NR_033616, intron 1 of 2) Chap1_Mam|DNA|hAT-Charlie 3186 NR_033616 73616 Mm.159038 NR_033616 ENSMUSG00000037247 Pldi 1700125F08Rik|Poldi polymorphic derived intron containing ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-22 chr14 63606014 63606307 + 1.45089835786865 NA promoter-TSS (NM_173393) promoter-TSS (NM_173393) -370 NM_173393 219149 Mm.32071 NM_173393 ENSMUSG00000035067 Xkr6 2700008G24Rik|BC024502|Xrg6 X-linked Kx blood group related 6 protein-coding common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-6 chr5 114719469 114719660 + 1.45089835786865 NA promoter-TSS (NR_105995) promoter-TSS (NR_105995) 49 NR_105995 102465622 NR_105995 ENSMUSG00000098656 Mir7028 Gm27674|mmu-mir-7028 microRNA 7028 ncRNA common_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-4 chr2 32655611 32655815 + 1.45089835786865 NA intron (NM_001146348, intron 1 of 14) intron (NM_001146348, intron 1 of 14) 3384 NR_035479 100316776 NR_035479 ENSMUSG00000093336 Mir1954 mmu-mir-1954 microRNA 1954 ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-76 chr9 45847317 45847539 + 1.45089835786865 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 8883 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-31 chr17 30084411 30084642 + 1.45089835786865 NA intron (NM_001356265, intron 2 of 5) intron (NM_001356265, intron 2 of 5) 79487 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-69 chr5 98940796 98941172 + 1.45089835786865 NA intron (NM_008926, intron 17 of 18) intron (NM_008926, intron 17 of 18) 86569 NM_001310677 110075 Mm.136461 NM_173404 ENSMUSG00000029335 Bmp3 9530029I04Rik bone morphogenetic protein 3 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-46 chr4 64636167 64636367 + 1.45089835786865 NA Intergenic Intergenic -359664 NR_151546 102633436 Mm.411637 NR_151546 Gm11217 - predicted gene 11217 ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-34 chr7 132571969 132572233 + 1.45089835786865 NA intron (NM_016978, intron 1 of 9) intron (NM_016978, intron 1 of 9) 4297 NM_016978 18242 Mm.13694 NM_016978 ENSMUSG00000030934 Oat AI194874|rhg ornithine aminotransferase protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-62 chr4 83322142 83322409 + 1.45089835786865 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 1914 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-72 chr8 64517654 64517915 + 1.45089835786865 NA Intergenic Intergenic -3343 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-14 chr15 66854299 66854580 + 1.45089835786865 NA Intergenic Intergenic -22610 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-7 chr11 80499395 80499679 + 1.45089835786865 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 9569 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-75 chr8 120215422 120215645 + 1.45089835786865 NA intron (NR_110496, intron 2 of 2) intron (NR_110496, intron 2 of 2) 12697 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-47 chr2 163812669 163812930 + 1.45089835786865 NA Intergenic Intergenic -8035 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865 chr1 43967857 43968079 + 1.45089835786865 NA intron (NM_009418, intron 10 of 29) intron (NM_009418, intron 10 of 29) 33974 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-12 chr11 84043161 84043375 + 1.45089835786865 NA 3' UTR (NM_194341, exon 20 of 20) 3' UTR (NM_194341, exon 20 of 20) 25089 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-51 chr5 103828295 103828567 + 1.45089835786865 NA exon (NM_001080798, exon 10 of 20) exon (NM_001080798, exon 10 of 20) 73858 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-57 chr3 101595530 101595740 + 1.45089835786865 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 9072 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-36 chr2 24423053 24423434 + 1.45089835786865 NA intron (NM_011040, intron 10 of 11) MIRb|SINE|MIR 36627 NM_001355232 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-43 chr2 180116209 180116562 + 1.45089835786865 NA Intergenic Intergenic -2981 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-4 chr1 89785168 89785359 + 1.45089835786865 NA intron (NM_178119, intron 12 of 17) intron (NM_178119, intron 12 of 17) -101371 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-43 chr2 108661196 108661459 + 1.45089835786865 NA Intergenic Intergenic 616963 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding common_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-3 chr18 46198147 46198343 + 1.45089835786865 NA intron (NM_178872, intron 1 of 9) CpG 573 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-5 chr5 5748093 5748292 + 1.45089835786865 NA intron (NM_027399, intron 1 of 4) intron (NM_027399, intron 1 of 4) 1125 NM_027399 70358 Mm.85429 NM_027399 ENSMUSG00000015652 Steap1 2410007B19Rik|Prss24|Steap six transmembrane epithelial antigen of the prostate 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-4 chr1 160281038 160281276 + 1.45089835786865 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) 14815 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-41 chr9 35342287 35342492 + 1.45089835786865 NA Intergenic Intergenic 61284 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-23 chr14 69733057 69733244 + 1.45089835786865 NA promoter-TSS (NM_134078) promoter-TSS (NM_134078) 316 NR_130157 75016 Mm.394574 NR_130157 ENSMUSG00000097284 4930480K23Rik - RIKEN cDNA 4930480K23 gene ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-58 chr6 85351284 85351482 + 1.45089835786865 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) -15010 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-53 chr3 84228344 84228539 + 1.45089835786865 NA intron (NM_001271726, intron 1 of 11) intron (NM_001271726, intron 1 of 11) -7564 NM_030706 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-31 chr7 25712664 25712908 + 1.45089835786865 NA 3' UTR (NM_028771, exon 5 of 5) 3' UTR (NM_028771, exon 5 of 5) 6267 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-75 chr6 108688126 108688365 + 1.45089835786865 NA Intergenic Intergenic -27311 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-25 chr4 137702905 137703132 + 1.45089835786865 NA intron (NR_138594, intron 1 of 1) intron (NR_138594, intron 1 of 1) 3588 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA common_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-3 chr13 71149660 71149853 + 1.45089835786865 NA Intergenic Intergenic 42667 NR_130325 100316804 NR_130325 ENSMUSG00000080580 Mir466f-4 Mirn466f-4|mmu-mir-466f-4 microRNA 466f-4 ncRNA unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-54 chr3 89459390 89459649 + 1.45089835786865 NA promoter-TSS (NM_027348) promoter-TSS (NM_027348) -52 NM_027348 68603 Mm.34242 NM_026784 ENSMUSG00000027952 Pmvk 1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE phosphomevalonate kinase protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-19 chr2 49771768 49771992 + 1.45089835786865 NA 3' UTR (NM_008449, exon 26 of 26) 3' UTR (NM_008449, exon 26 of 26) -15806 NM_027990 71897 Mm.41381 NM_027990 ENSMUSG00000026765 Lypd6b 2310010M24Rik|AW049525 LY6/PLAUR domain containing 6B protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-17 chr19 55707131 55707333 + 1.45089835786865 NA Intergenic Intergenic -5028 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-2 chr1 135729805 135730015 + 1.45089835786865 NA intron (NM_007791, intron 1 of 5) intron (NM_007791, intron 1 of 5) 743 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-4 chr5 137083454 137083641 + 1.45089835786865 NA Intergenic RSINE1|SINE|B4 -11275 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-79 chr7 64292947 64293189 + 1.45089835786865 NA intron (NM_172742, intron 2 of 15) intron (NM_172742, intron 2 of 15) 5398 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-5 chr11 29691310 29691529 + 1.45089835786865 NA Intergenic Intergenic -1479 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865 chr10 116261582 116261807 + 1.45089835786865 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -39680 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-5 chr7 74629088 74629295 + 1.45089835786865 NA Intergenic Intergenic -74411 NM_001038643 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-55 chr5 136513669 136513966 + 1.45089835786865 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 52164 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-24 chr14 76762191 76762390 + 1.45089835786865 NA TTS (NR_153763) TTS (NR_153763) 2159 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-59 chr6 86669779 86670014 + 1.45089835786865 NA promoter-TSS (NM_010751) promoter-TSS (NM_010751) -737 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding unique_peak2_6_12_-1.15463066520268_3.12312438553975_1.45089835786865-27 chr5 103719932 103720166 + 1.45089835786865 NA Intergenic Intergenic -34113 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-3 chr1 66814608 66814795 + 1.45089835786865 NA intron (NM_001357156, intron 1 of 14) intron (NM_001357156, intron 1 of 14) 2894 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-47 chr4 134721466 134721690 + 1.45089835786865 NA Intergenic RSINE1|SINE|B4 -17288 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-74 chr8 94950727 94951058 + 1.45089835786865 NA Intergenic Intergenic -26217 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-22 chr14 120832754 120832963 + 1.45089835786865 NA Intergenic Intergenic -78336 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding unique_peak1_13_6_0.731399151307565_3.17305449771139_1.45089835786865-32 chr17 79710457 79710651 + 1.45089835786865 NA exon (NM_009994, exon 3 of 3) exon (NM_009994, exon 3 of 3) 4487 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_14_6_0.830232602714769_3.22247122341499_1.45089835786865-58 chr3 104945413 104945637 + 1.45089835786865 NA 3' UTR (NM_009520, exon 5 of 5) 3' UTR (NM_009520, exon 5 of 5) 16184 NM_009520 22414 Mm.10740 NM_009520 ENSMUSG00000027840 Wnt2b Wnt13 wingless-type MMTV integration site family, member 2B protein-coding common_peak2_14_6_0.830232602714769_3.22247122341499_1.45089835786865 chr6 87672531 87672735 + 1.45089835786865 NA promoter-TSS (NM_001170489) promoter-TSS (NM_001170489) -465 NM_001170489 72103 Mm.31770 NM_024251 ENSMUSG00000030051 Aplf 2010301N04Rik|AI452191 aprataxin and PNKP like factor protein-coding common_peak1_87_47_0.58715792230266_5.87854146187249_1.45005013999663-2 chr8 75088831 75089428 + 1.45005013999663 NA Intergenic Intergenic -4489 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak1_87_47_0.58715792230266_5.87854146187249_1.45005013999663 chr1 40270895 40271687 + 1.45005013999663 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 4705 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_56_72_-0.639825502107416_5.86991180782631_1.45005013999663 chr4 59189188 59190130 + 1.45005013999663 NA exon (NM_011673, exon 1 of 9) exon (NM_011673, exon 1 of 9) 109 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_191_118_0.394892944417574_7.09226423551673_1.4491088002274 chr2 60124058 60125969 + 1.4491088002274 NA intron (NM_001001182, intron 1 of 35) GC_rich|Low_complexity|Low_complexity 727 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak1_143_156_-0.41701945936541_7.08611101920892_1.4491088002274 chr19 57610202 57611747 + 1.4491088002274 NA promoter-TSS (NM_181415) promoter-TSS (NM_181415) -60 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding common_peak2_169_180_-0.384468090139364_7.30761184201352_1.44847887114752 chr7 45460046 45461873 + 1.44847887114752 NA TTS (NM_007527) TTS (NM_007527) -1073 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding common_peak1_75_39_0.64018038008454_5.64201828492963_1.44840522860438-2 chr4 63530777 63531378 + 1.44840522860438 NA Intergenic Intergenic -13688 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_75_39_0.64018038008454_5.64201828492963_1.44840522860438 chr2 60209911 60210563 + 1.44840522860438 NA intron (NM_020575, intron 1 of 9) CpG 301 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak2_46_62_-0.703618620197862_5.62547061340099_1.44840522860438-2 chr7 45434980 45435799 + 1.44840522860438 NA promoter-TSS (NM_011304) promoter-TSS (NM_011304) 550 NM_030678 14936 Mm.275654 NM_030678 ENSMUSG00000003865 Gys1 Gys3|MGS glycogen synthase 1, muscle protein-coding common_peak1_74_39_0.6212063694924_5.63253127963356_1.44840522860438-3 chr17 87848491 87849505 + 1.44840522860438 NA Intergenic Intergenic -51004 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_46_62_-0.703618620197862_5.62547061340099_1.44840522860438 chr1 186586290 186586962 + 1.44840522860438 NA Intergenic Intergenic -27945 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_74_39_0.6212063694924_5.63253127963356_1.44840522860438-2 chr15 103058734 103059857 + 1.44840522860438 NA Intergenic Intergenic 24900 NM_013553 15423 Mm.1351 NM_013553 ENSMUSG00000075394 Hoxc4 Hox-3.5 homeobox C4 protein-coding common_peak1_74_39_0.6212063694924_5.63253127963356_1.44840522860438 chr1 160211897 160212800 + 1.44840522860438 NA intron (NM_009786, intron 1 of 5) intron (NM_009786, intron 1 of 5) 544 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak1_74_39_0.6212063694924_5.63253127963356_1.44840522860438-4 chr3 89391267 89392070 + 1.44840522860438 NA promoter-TSS (NR_040403) promoter-TSS (NR_040403) -196 NR_040403 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 - predicted gene 15417 ncRNA common_peak2_146_87_0.447707147382967_6.68328519232878_1.44830209206089 chr11 32221505 32222268 + 1.44830209206089 NA intron (NM_010117, intron 1 of 17) CpG 407 NM_010117 13650 Mm.11545 NM_010117 ENSMUSG00000020282 Rhbdf1 C16ORF8|Dist|Dist1|Egfr-rs|mKIAA4242 rhomboid 5 homolog 1 protein-coding common_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-2 chr19 16925050 16925347 + 1.44787515926925 NA Intergenic Intergenic -30920 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-2 chr1 180569078 180569565 + 1.44787515926925 NA intron (NM_007415, intron 1 of 22) CpG 430 NM_007415 11545 Mm.277779 NM_007415 ENSMUSG00000026496 Parp1 5830444G22Rik|AI893648|ARTD1|Adprp|Adprt1|C80510|PARP|PPOL|msPARP|parp-1|sPARP-1 poly (ADP-ribose) polymerase family, member 1 protein-coding common_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-6 chr9 25152061 25152413 + 1.44787515926925 NA promoter-TSS (NM_020586) promoter-TSS (NM_020586) -456 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-7 chr6 82893902 82894365 + 1.44787515926925 NA Intergenic B1_Mur4|SINE|Alu -12280 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-15 chr7 116198371 116199139 + 1.44787515926925 NA promoter-TSS (NM_001305189) promoter-TSS (NM_001305189) -194 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-5 chr8 71476221 71476734 + 1.44787515926925 NA TTS (NM_001294259) TTS (NM_001294259) 7283 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak2_31_12_1.02254534650346_4.21171239139282_1.44787515926925 chr12 105684526 105684736 + 1.44787515926925 NA promoter-TSS (NM_178613) promoter-TSS (NM_178613) 610 NM_029654 76559 Mm.114362 NM_029654 ENSMUSG00000041341 Atg2b 2410024A21Rik|AI047755|AI503411|AW558123|C030004M05Rik|C630028L02Rik|mKIAA4067 autophagy related 2B protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-11 chr6 90763497 90764087 + 1.44787515926925 NA intron (NM_001356440, intron 1 of 13) intron (NM_001356440, intron 1 of 13) 46331 NM_001356440 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-7 chr15 77851306 77851793 + 1.44787515926925 NA Intergenic Intergenic -9374 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-5 chr2 21234179 21234474 + 1.44787515926925 NA Intergenic Intergenic 28602 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-16 chr8 108798363 108798843 + 1.44787515926925 NA intron (NM_007496, intron 2 of 9) intron (NM_007496, intron 2 of 9) 83959 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-8 chr16 45088546 45088924 + 1.44787515926925 NA Intergenic Intergenic -5276 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-10 chr5 124240790 124241190 + 1.44787515926925 NA intron (NM_011256, intron 1 of 24) intron (NM_011256, intron 1 of 24) 8770 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding common_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925 chr15 89123319 89123603 + 1.44787515926925 NA promoter-TSS (NM_001163319) promoter-TSS (NM_001163319) -311 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-6 chr6 34865201 34865484 + 1.44787515926925 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 2196 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-3 chr2 24471020 24471345 + 1.44787515926925 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 4417 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925 chr14 27622496 27623003 + 1.44787515926925 NA intron (NM_001347497, intron 1 of 19) CpG 342 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-11 chr2 180581271 180581672 + 1.44787515926925 NA non-coding (NR_151482, exon 1 of 5) non-coding (NR_151482, exon 1 of 5) 249 NR_151482 73247 Mm.426558 NM_028479 ENSMUSG00000027569 Mrgbp 1600027N09Rik|AW060503|C80444 MRG/MORF4L binding protein protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-4 chr15 101329120 101329466 + 1.44787515926925 NA Intergenic Intergenic 36081 NR_033803 77717 Mm.391998 NR_033803 ENSMUSG00000075408 6030408B16Rik AI225877 RIKEN cDNA 6030408B16 gene ncRNA common_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-4 chrX 71364803 71365165 + 1.44787515926925 NA exon (NM_016985, exon 1 of 15) exon (NM_016985, exon 1 of 15) 224 NM_001313706 53332 Mm.219672 NM_016985 ENSMUSG00000015214 Mtmr1 AW049210 myotubularin related protein 1 protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-14 chr7 82464821 82465073 + 1.44787515926925 NA intron (NM_001190374, intron 6 of 29) intron (NM_001190374, intron 6 of 29) 129253 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-2 chr11 61120484 61120796 + 1.44787515926925 NA Intergenic Intergenic -20195 NM_021349 57916 Mm.265915 NM_021349 ENSMUSG00000010142 Tnfrsf13b 1200009E08Rik|Taci tumor necrosis factor receptor superfamily, member 13b protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-5 chr11 96303860 96304387 + 1.44787515926925 NA exon (NM_008268, exon 1 of 2) exon (NM_008268, exon 1 of 2) 611 NM_008268 15413 Mm.207 NM_008268 ENSMUSG00000038700 Hoxb5 AI385717|Hox-2.1 homeobox B5 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-6 chr12 4588005 4588576 + 1.44787515926925 NA Intergenic Intergenic -4718 NM_001198969 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-5 chr13 63310812 63311231 + 1.44787515926925 NA TTS (NM_001347514) TTS (NM_001347514) -9738 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-10 chr19 5061139 5061652 + 1.44787515926925 NA Intergenic Intergenic -6683 NM_054042 70445 Mm.29597 NM_054042 ENSMUSG00000056481 Cd248 2610111G01Rik|AI842296|Cd164l1|Tem1 CD248 antigen, endosialin protein-coding common_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-3 chr6 124663071 124663483 + 1.44787515926925 NA exon (NM_145130, exon 1 of 13) exon (NM_145130, exon 1 of 13) 173 NM_145130 14792 Mm.273915 NM_145130 ENSMUSG00000004270 Lpcat3 C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG lysophosphatidylcholine acyltransferase 3 protein-coding unique_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925-6 chr8 24667336 24667766 + 1.44787515926925 NA intron (NR_136908, intron 5 of 19) intron (NR_136908, intron 5 of 19) 7204 NR_136908 13524 Mm.89943 NM_010084 ENSMUSG00000031552 Adam18 Adam27|Dtgn3|Tmdc3|tMDCIII a disintegrin and metallopeptidase domain 18 protein-coding common_peak1_14_26_-1.11729997739109_4.19623751346792_1.44787515926925 chr11 74770383 74770619 + 1.44787515926925 NA promoter-TSS (NM_026197) promoter-TSS (NM_026197) -362 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-8 chr8 11340088 11340421 + 1.44787515926925 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -27428 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-6 chr14 22964186 22964714 + 1.44787515926925 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 130121 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-2 chr1 132319566 132319958 + 1.44787515926925 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 3637 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-3 chr17 63798400 63798840 + 1.44787515926925 NA Intergenic Intergenic -65361 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding unique_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925-5 chr7 109635145 109635425 + 1.44787515926925 NA Intergenic Intergenic -18138 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925-2 chr6 114933565 114934038 + 1.44787515926925 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -11980 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-4 chr2 110192894 110193254 + 1.44787515926925 NA Intergenic Intergenic 112651 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-4 chr11 80500089 80500327 + 1.44787515926925 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 8898 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925 chr1 30904132 30904577 + 1.44787515926925 NA Intergenic Intergenic -41098 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-3 chr11 79534686 79535156 + 1.44787515926925 NA intron (NM_010897, intron 36 of 57) intron (NM_010897, intron 36 of 57) -4312 NM_010161 14017 Mm.439665 NM_010161 ENSMUSG00000078771 Evi2a AW491894|Evi-2|Evi2 ecotropic viral integration site 2a protein-coding common_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925 chr5 36830396 36830599 + 1.44787515926925 NA exon (NM_008550, exon 1 of 19) exon (NM_008550, exon 1 of 19) 152 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding common_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-2 chr18 36402897 36403294 + 1.44787515926925 NA TTS (NM_026027) TTS (NM_026027) 51400 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-12 chr7 25278983 25279292 + 1.44787515926925 NA intron (NM_001302811, intron 2 of 20) CpG -3042 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding unique_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925-4 chr6 97294113 97294468 + 1.44787515926925 NA intron (NM_145148, intron 22 of 23) intron (NM_145148, intron 22 of 23) -41510 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-3 chr11 98741917 98742300 + 1.44787515926925 NA intron (NM_178060, intron 1 of 8) CpG 323 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-7 chr16 21211388 21211774 + 1.44787515926925 NA intron (NM_010143, intron 1 of 15) intron (NM_010143, intron 1 of 15) 6786 NM_010143 13845 Mm.6972 NM_010143 ENSMUSG00000005958 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-12 chr5 105636316 105636714 + 1.44787515926925 NA Intergenic Intergenic -63454 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925-3 chr2 11402545 11403151 + 1.44787515926925 NA Intergenic Intergenic -4348 NR_040615 77543 Mm.490670 NR_040615 ENSMUSG00000102674 8030442B05Rik - RIKEN cDNA 8030442B05 gene ncRNA unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-9 chr19 44901599 44902206 + 1.44787515926925 NA Intergenic Intergenic -29217 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-5 chr3 53202954 53203412 + 1.44787515926925 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 161636 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-13 chr7 49699748 49700069 + 1.44787515926925 NA Intergenic Intergenic -59198 NM_001146053 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925 chr10 93287611 93287825 + 1.44787515926925 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 23441 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-4 chr11 82034175 82034555 + 1.44787515926925 NA Intergenic Intergenic -1212 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-6 chr6 52175440 52175861 + 1.44787515926925 NA intron (NM_010452, intron 3 of 4) CpG 2769 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-3 chr11 49268125 49268750 + 1.44787515926925 NA Intergenic Intergenic -11713 NM_146471 258463 Mm.377517 NM_146471 ENSMUSG00000059864 Olfr1393 MOR256-24 olfactory receptor 1393 protein-coding unique_peak1_31_12_1.02254534650346_4.21171239139282_1.44787515926925-9 chr18 65746017 65746405 + 1.44787515926925 NA intron (NM_177028, intron 12 of 14) intron (NM_177028, intron 12 of 14) 47943 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak2_13_26_-1.2161334287983_4.14682078776432_1.44787515926925-2 chr18 75503018 75503242 + 1.44787515926925 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -11515 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-4 chr2 164512386 164512788 + 1.44787515926925 NA Intergenic Intergenic 15062 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925 chr10 93307618 93308033 + 1.44787515926925 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 3334 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925 chr1 132350292 132350813 + 1.44787515926925 NA Intergenic Intergenic 17396 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925 chr15 10745935 10746533 + 1.44787515926925 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 31334 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak2_14_26_-1.11729997739109_4.19623751346792_1.44787515926925-2 chr12 20196973 20197247 + 1.44787515926925 NA Intergenic CpG 618669 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA unique_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-8 chr17 13475045 13475369 + 1.44787515926925 NA Intergenic Intergenic -46249 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo common_peak1_30_12_0.977064800984934_4.18897211863356_1.44787515926925-7 chr7 19319607 19319983 + 1.44787515926925 NA Intergenic Intergenic -9750 NM_001347586 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak2_81_43_0.611527948963141_5.76519559311887_1.44728952217472 chr4 141274644 141275471 + 1.44728952217472 NA Intergenic Intergenic -3382 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak1_67_83_-0.589541545015553_6.09754665027098_1.44715333719953 chr7 143069449 143070428 + 1.44715333719953 NA 5' UTR (NM_001115085, exon 3 of 3) 5' UTR (NM_001115085, exon 3 of 3) 570 NM_001115085 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding common_peak1_100_56_0.536607885092672_6.10119395671108_1.44715333719953 chr15 89075032 89075867 + 1.44715333719953 NA promoter-TSS (NM_001355617) promoter-TSS (NM_001355617) 405 NR_040417 69120 Mm.276391 NR_040417 ENSMUSG00000087331 1810021B22Rik - RIKEN cDNA 1810021B22 gene ncRNA common_peak1_101_56_0.55072146582592_6.1082507470777_1.44715333719953-2 chr8 61590626 61591194 + 1.44715333719953 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 259 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_67_83_-0.589541545015553_6.09754665027098_1.44715333719953 chr8 117156947 117157671 + 1.44715333719953 NA promoter-TSS (NM_001081151) promoter-TSS (NM_001081151) -826 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak1_101_56_0.55072146582592_6.1082507470777_1.44715333719953 chr19 55713573 55714669 + 1.44715333719953 NA Intergenic Intergenic -11917 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_92_107_-0.503602360383232_6.50308632197185_1.4468670071615 chr4 116220836 116221992 + 1.4468670071615 NA promoter-TSS (NM_001355584) promoter-TSS (NM_001355584) -2 NM_001355585 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55|p55pik phosphoinositide-3-kinase regulatory subunit 3 protein-coding common_peak2_92_107_-0.503602360383232_6.50308632197185_1.4468670071615 chr3 115887729 115889089 + 1.4468670071615 NA promoter-TSS (NR_027894) promoter-TSS (NR_027894) 226 NM_027193 69740 Mm.5915 NM_027193 ENSMUSG00000033554 Dph5 2410012M04Rik|AU045680|C80186 diphthamide biosynthesis 5 protein-coding common_peak2_92_107_-0.503602360383232_6.50308632197185_1.4468670071615-2 chr4 137697839 137699095 + 1.4468670071615 NA intron (NR_138594, intron 1 of 1) intron (NR_138594, intron 1 of 1) 8139 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA common_peak2_130_76_0.475275767747489_6.50442442456865_1.44686700716148 chr4 120517481 120518845 + 1.44686700716148 NA intron (NM_001355424, intron 11 of 14) intron (NM_001355424, intron 11 of 14) -14068 NM_177570 194219 Mm.29788 NM_177570 ENSMUSG00000047518 Slfnl1 4933406A14Rik schlafen like 1 protein-coding common_peak1_113_127_-0.457055922800643_6.77147203859968_1.44662603777697 chr11 103114871 103116009 + 1.44662603777697 NA promoter-TSS (NM_138753) promoter-TSS (NM_138753) -885 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-7 chr5 125059137 125059590 + 1.44380006500971 NA intron (NM_011424, intron 17 of 46) intron (NM_011424, intron 17 of 46) 55888 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-15 chr4 129263924 129264258 + 1.44380006500971 NA Intergenic Intergenic -2687 NM_001285867 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-9 chr15 6411647 6411865 + 1.44380006500971 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 25008 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-8 chr8 27068979 27069416 + 1.44380006500971 NA Intergenic Intergenic -16644 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-4 chr11 5848888 5849437 + 1.44380006500971 NA Intergenic Intergenic -11146 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-14 chr2 132252832 132253105 + 1.44380006500971 NA exon (NM_011045, exon 1 of 6) exon (NM_011045, exon 1 of 6) 212 NM_011045 18538 Mm.7141 NM_011045 ENSMUSG00000027342 Pcna - proliferating cell nuclear antigen protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-21 chr9 51175800 51176281 + 1.44380006500971 NA Intergenic Intergenic -37650 NM_011136 18985 Mm.897 NM_011136 ENSMUSG00000032053 Pou2af1 BOB.1|Bob-1|Bob1|OBF-1|OBF.1|OCA-B|OCAB POU domain, class 2, associating factor 1 protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-2 chr11 17169534 17169845 + 1.44380006500971 NA intron (NM_024459, intron 1 of 5) intron (NM_024459, intron 1 of 5) 10391 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-2 chr14 30951612 30951928 + 1.44380006500971 NA intron (NM_001308328, intron 1 of 13) intron (NM_001308328, intron 1 of 13) 393 NM_011849 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-5 chr4 155488449 155488860 + 1.44380006500971 NA Intergenic Intergenic -2707 NM_001160017 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-13 chr2 60722735 60723302 + 1.44380006500971 NA promoter-TSS (NM_001159564) promoter-TSS (NM_001159564) -415 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-7 chr14 18627905 18628237 + 1.44380006500971 NA intron (NM_001360327, intron 4 of 5) intron (NM_001360327, intron 4 of 5) 265342 NM_001360328 218793 Mm.23551 NM_144839 ENSMUSG00000058317 Ube2e2 BC016265 ubiquitin-conjugating enzyme E2E 2 protein-coding common_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-3 chr7 116207344 116207698 + 1.44380006500971 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -8960 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-6 chr5 114707757 114708048 + 1.44380006500971 NA 5' UTR (NM_029992, exon 1 of 13) 5' UTR (NM_029992, exon 1 of 13) 123 NM_029992 77832 Mm.239698 NM_029992 ENSMUSG00000002486 Tchp A930031F18Rik|AV279199 trichoplein, keratin filament binding protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-20 chr8 123021600 123022050 + 1.44380006500971 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 20459 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak1_11_23_-1.26703187470266_3.95144656336983_1.44380006500971 chr5 28070848 28071069 + 1.44380006500971 NA promoter-TSS (NM_153526) promoter-TSS (NM_153526) -454 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-2 chr10 93308263 93308530 + 1.44380006500971 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 2763 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-16 chr4 129619348 129619600 + 1.44380006500971 NA promoter-TSS (NM_198026) promoter-TSS (NM_198026) -381 NM_198026 230767 Mm.441132 NM_198026 ENSMUSG00000040795 Iqcc BC026978 IQ motif containing C protein-coding common_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-3 chr7 127801090 127801461 + 1.44380006500971 NA intron (NM_001040684, intron 2 of 6) intron (NM_001040684, intron 2 of 6) 666 NM_001040684 101502 Mm.157103 NM_133943 ENSMUSG00000042289 Hsd3b7 AI195443|BB098564 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-12 chr2 24421819 24422189 + 1.44380006500971 NA intron (NM_011040, intron 11 of 11) intron (NM_011040, intron 11 of 11) 35388 NM_001355232 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971 chr1 133214394 133214833 + 1.44380006500971 NA Intergenic Intergenic -31484 NM_001160268 240753 Mm.253559 NM_182930 ENSMUSG00000041757 Plekha6 9530028L01Rik|AU042621|Pepp3 pleckstrin homology domain containing, family A member 6 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-10 chr16 20718405 20718930 + 1.44380006500971 NA 5' UTR (NM_001356423, exon 1 of 5) 5' UTR (NM_001356423, exon 1 of 5) 490 NM_001356423 245841 Mm.288730 NM_145632 ENSMUSG00000021018 Polr2h - polymerase (RNA) II (DNA directed) polypeptide H protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-10 chr9 113976454 113977091 + 1.44380006500971 NA TTS (NM_178624) TTS (NM_178624) 45838 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-2 chr6 108443083 108443322 + 1.44380006500971 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -46541 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_27_10_1.07226747515463_3.99556535621461_1.44380006500971 chr2 157377251 157377474 + 1.44380006500971 NA intron (NM_026968, intron 1 of 2) intron (NM_026968, intron 1 of 2) 9768 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-3 chr11 79083640 79083981 + 1.44380006500971 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) -23974 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971 chr10 78399700 78399998 + 1.44380006500971 NA TTS (NM_010925) TTS (NM_010925) 8696 NR_105872 102465547 NR_105872 ENSMUSG00000098376 Mir6907 Gm27351|mmu-mir-6907 microRNA 6907 ncRNA unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-11 chr18 42052356 42052808 + 1.44380006500971 NA Intergenic Intergenic -1128 NM_172966 269016 Mm.45472 NM_172966 ENSMUSG00000057719 Sh3rf2 2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158 SH3 domain containing ring finger 2 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-18 chr6 41605136 41605456 + 1.44380006500971 NA promoter-TSS (NM_001146351) promoter-TSS (NM_001146351) -186 NM_001146351 13848 Mm.271976 NM_007680 ENSMUSG00000029869 Ephb6 Cekl|Mep Eph receptor B6 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-8 chr14 20141239 20141593 + 1.44380006500971 NA 3' UTR (NM_021542, exon 5 of 5) 3' UTR (NM_021542, exon 5 of 5) 40366 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-19 chr6 97295989 97296455 + 1.44380006500971 NA exon (NM_001346637, exon 21 of 23) exon (NM_001346637, exon 21 of 23) -43442 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_11_23_-1.26703187470266_3.95144656336983_1.44380006500971 chr8 119727833 119728099 + 1.44380006500971 NA intron (NM_026922, intron 6 of 26) intron (NM_026922, intron 6 of 26) 27957 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-3 chr10 93402814 93403184 + 1.44380006500971 NA Intergenic Intergenic -30108 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-23 chr9 71625055 71625363 + 1.44380006500971 NA Intergenic Intergenic -32849 NM_001033208 102371 Mm.27585 NM_001033208 ENSMUSG00000041361 Myzap AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap myocardial zonula adherens protein protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-22 chr9 63132560 63132885 + 1.44380006500971 NA Intergenic Intergenic 14258 NM_172446 207667 Mm.36349 NM_172446 ENSMUSG00000022245 Skor1 AV273001|C230094B15Rik|Corl1|Lbxcor1 SKI family transcriptional corepressor 1 protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-4 chr18 54907146 54907393 + 1.44380006500971 NA intron (NM_001360787, intron 2 of 8) intron (NM_001360787, intron 2 of 8) 82911 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971 chr10 77127393 77127868 + 1.44380006500971 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -13925 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-6 chr12 70881402 70881857 + 1.44380006500971 NA intron (NM_028127, intron 6 of 13) intron (NM_028127, intron 6 of 13) 56115 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-5 chr11 22830830 22831198 + 1.44380006500971 NA Intergenic Intergenic 28721 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971 chr1 105991171 105991511 + 1.44380006500971 NA exon (NM_001122676, exon 1 of 14) exon (NM_001122676, exon 1 of 14) 935 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding unique_peak1_27_10_1.07226747515463_3.99556535621461_1.44380006500971-17 chr5 107167289 107167747 + 1.44380006500971 NA intron (NM_011578, intron 4 of 16) intron (NM_011578, intron 4 of 16) 122111 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding unique_peak2_11_23_-1.26703187470266_3.95144656336983_1.44380006500971-9 chr8 91467155 91467710 + 1.44380006500971 NA intron (NM_011936, intron 4 of 8) intron (NM_011936, intron 4 of 8) 153907 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_123_71_0.493469558537226_6.41665978071092_1.44309789287162 chr5 101816775 101818133 + 1.44309789287162 NA intron (NM_173370, intron 11 of 12) intron (NM_173370, intron 11 of 12) 52324 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak2_73_89_-0.567947334845477_6.20787942890694_1.44267101396302-2 chr2 116976403 116977536 + 1.44267101396302 NA Intergenic Intergenic 76817 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_73_89_-0.567947334845477_6.20787942890694_1.44267101396302 chr19 6255125 6256391 + 1.44267101396302 NA exon (NM_194348, exon 28 of 40) exon (NM_194348, exon 28 of 40) -8885 NR_029830 723957 NR_029830 ENSMUSG00000065582 Mir194-2 Mirn194-2|mir-194-2 microRNA 194-2 ncRNA common_peak1_115_66_0.50176885134625_6.3169736161309_1.44153550464097 chr13 49317677 49318883 + 1.44153550464097 NA Intergenic Intergenic -9072 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_115_66_0.50176885134625_6.3169736161309_1.44153550464097-2 chr18 6765198 6765801 + 1.44153550464097 NA intron (NM_181070, intron 1 of 6) CpG 332 NM_001278447 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak1_79_95_-0.54937551689597_6.31027474227317_1.44153550464095 chr11 70669042 70669846 + 1.44153550464095 NA promoter-TSS (NM_172561) promoter-TSS (NM_172561) -28 NM_001167669 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding common_peak2_79_95_-0.54937551689597_6.31027474227317_1.44153550464095 chr13 51645371 51646372 + 1.44153550464095 NA intron (NM_025415, intron 1 of 2) intron (NM_025415, intron 1 of 2) 639 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding common_peak2_99_114_-0.490246168365311_6.60036696676172_1.44060810775761 chr2 168954768 168955630 + 1.44060810775761 NA 5' UTR (NM_009564, exon 1 of 6) 5' UTR (NM_009564, exon 1 of 6) 388 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding common_peak2_202_126_0.380832404605987_7.17910088907516_1.43943841909085 chr7 116286545 116289134 + 1.43943841909085 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 20537 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_38_53_-0.748513725480899_5.38063063942302_1.43939133646632 chr4 103215075 103215437 + 1.43939133646632 NA promoter-TSS (NM_001356276) promoter-TSS (NM_001356276) -80 NM_177732 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding common_peak2_63_32_0.671535965712854_5.38016210221488_1.43939133646632 chr3 14578891 14579580 + 1.43939133646632 NA intron (NM_007892, intron 1 of 7) intron (NM_007892, intron 1 of 7) 564 NM_007892 13559 Mm.153415 NM_007892 ENSMUSG00000027552 E2f5 AU024671|E2F-5 E2F transcription factor 5 protein-coding common_peak1_63_32_0.671535965712854_5.38016210221488_1.43939133646632-3 chr15 52922737 52923589 + 1.43939133646632 NA Intergenic Intergenic 210718 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_38_53_-0.748513725480899_5.38063063942302_1.43939133646632 chr4 103215082 103215435 + 1.43939133646632 NA promoter-TSS (NM_001356276) promoter-TSS (NM_001356276) -82 NM_177732 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding unique_peak2_38_53_-0.748513725480899_5.38063063942302_1.43939133646632 chr19 28283315 28283915 + 1.43939133646632 NA intron (NM_175459, intron 9 of 10) intron (NM_175459, intron 9 of 10) -272449 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_64_32_0.693745974277294_5.3912671064971_1.43939133646632 chr14 52019500 52020052 + 1.43939133646632 NA promoter-TSS (NM_001253694) promoter-TSS (NM_001253694) -63 NM_001253694 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding common_peak1_63_32_0.671535965712854_5.38016210221488_1.43939133646632 chr10 86065091 86065997 + 1.43939133646632 NA intron (NM_013722, intron 10 of 13) MIRc|SINE|MIR -30310 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak2_38_53_-0.748513725480899_5.38063063942302_1.43939133646632-2 chr7 80387577 80388425 + 1.43939133646632 NA promoter-TSS (NM_010194) promoter-TSS (NM_010194) -55 NM_010194 14159 Mm.48757 NM_010194 ENSMUSG00000053158 Fes AI586313|BB137047|FPS|c-fes feline sarcoma oncogene protein-coding common_peak1_64_32_0.693745974277294_5.3912671064971_1.43939133646632 chr11 84080038 84080443 + 1.43939133646632 NA intron (NM_172562, intron 15 of 15) intron (NM_172562, intron 15 of 15) -11883 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak1_63_32_0.671535965712854_5.38016210221488_1.43939133646632-2 chr14 57291834 57292823 + 1.43939133646632 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 106155 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_63_32_0.671535965712854_5.38016210221488_1.43939133646632-2 chrX 159650385 159650879 + 1.43939133646632 NA intron (NM_001135727, intron 1 of 17) intron (NM_001135727, intron 1 of 17) 23360 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_63_32_0.671535965712854_5.38016210221488_1.43939133646632-4 chr3 122121474 122122161 + 1.43939133646632 NA intron (NM_007378, intron 19 of 49) intron (NM_007378, intron 19 of 49) 77357 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_62_78_-0.610410449930269_5.99857552321197_1.4378465109598 chr15 62659048 62659864 + 1.4378465109598 NA Intergenic Intergenic -440005 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_62_78_-0.610410449930269_5.99857552321197_1.4378465109598-2 chr4 126753553 126754265 + 1.4378465109598 NA promoter-TSS (NM_011986) promoter-TSS (NM_011986) 139 NM_001035526 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding common_peak1_94_52_0.553844919162582_6.00484291414449_1.43784651095979 chr14 75753352 75754507 + 1.43784651095979 NA intron (NM_177381, intron 1 of 22) intron (NM_177381, intron 1 of 22) 564 NM_177381 338337 Mm.86507 NM_177381 ENSMUSG00000034893 Cog3 E430004N23 component of oligomeric golgi complex 3 protein-coding common_peak1_404_272_0.266172251815153_8.22584326682743_1.43763979859932 chr12 111429072 111433046 + 1.43763979859932 NA 3' UTR (NM_028807, exon 13 of 13) 3' UTR (NM_028807, exon 13 of 13) -11602 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-56 chr8 41336437 41336840 + 1.4372489031793 NA Intergenic RSINE1|SINE|B4 38059 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-14 chr12 70468050 70468256 + 1.4372489031793 NA TTS (NM_028339) TTS (NM_028339) 14999 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-30 chr9 57763815 57764041 + 1.4372489031793 NA intron (NM_007713, intron 1 of 12) intron (NM_007713, intron 1 of 12) 1932 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-7 chr13 21754499 21754740 + 1.4372489031793 NA promoter-TSS (NM_178183) promoter-TSS (NM_178183) 496 NM_178201 319187 NM_178201 ENSMUSG00000095217 Hist1h2bn - histone cluster 1, H2bn protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-33 chr18 65671877 65672083 + 1.4372489031793 NA intron (NM_001361052, intron 6 of 8) intron (NM_001361052, intron 6 of 8) -26288 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-55 chr8 26689177 26689403 + 1.4372489031793 NA Intergenic Intergenic 135133 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-13 chr16 16594768 16595053 + 1.4372489031793 NA intron (NM_001301817, intron 1 of 16) intron (NM_001301817, intron 1 of 16) 5068 NM_001301817 224014 Mm.256131 NM_139232 ENSMUSG00000022788 Fgd4 9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-26 chr7 128307896 128308122 + 1.4372489031793 NA Intergenic Intergenic -9878 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-44 chr4 11916695 11917108 + 1.4372489031793 NA Intergenic Intergenic 48812 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-37 chr19 58651994 58652225 + 1.4372489031793 NA Intergenic Intergenic -18256 NM_026925 69060 Mm.20407 NM_026925 ENSMUSG00000046008 Pnlip 1810007A24Rik|PL|PTL pancreatic lipase protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-25 chr15 38725536 38725768 + 1.4372489031793 NA intron (NR_131206, intron 1 of 2) intron (NR_131206, intron 1 of 2) 2864 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-10 chr11 102436289 102436520 + 1.4372489031793 NA TTS (NM_199200) TTS (NM_199200) 6082 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-8 chr11 61615984 61616226 + 1.4372489031793 NA Intergenic Intergenic -36418 NM_001252189 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-30 chr16 95765858 95766302 + 1.4372489031793 NA Intergenic Intergenic 63673 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-39 chr2 34770483 34770797 + 1.4372489031793 NA Intergenic ID_B1|SINE|B4 -1450 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-50 chr6 47812875 47813082 + 1.4372489031793 NA intron (NM_009787, intron 1 of 9) intron (NM_009787, intron 1 of 9) 534 NM_009787 12304 Mm.2442 NM_009787 ENSMUSG00000025823 Pdia4 AI987846|Cai|ERp-72|Erp72 protein disulfide isomerase associated 4 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-61 chr9 80158291 80158496 + 1.4372489031793 NA Intergenic Intergenic -6641 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-59 chr8 111555483 111555840 + 1.4372489031793 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 17318 NM_001168623 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-8 chr13 41332704 41332983 + 1.4372489031793 NA intron (NM_001111324, intron 3 of 7) intron (NM_001111324, intron 3 of 7) 26158 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-47 chr5 112275299 112275553 + 1.4372489031793 NA Intergenic Intergenic -1265 NM_001326590 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-54 chr8 13529103 13529303 + 1.4372489031793 NA Intergenic Intergenic 33258 NM_025601 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-36 chr19 5012883 5013145 + 1.4372489031793 NA Intergenic Intergenic -10992 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-16 chr12 85606832 85607155 + 1.4372489031793 NA intron (NM_001205053, intron 1 of 3) intron (NM_001205053, intron 1 of 3) 6975 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-62 chr9 86464711 86464911 + 1.4372489031793 NA exon (NM_027394, exon 1 of 10) exon (NM_027394, exon 1 of 10) 105 NM_027394 70348 Mm.53469 NM_027394 ENSMUSG00000032415 Ube2cbp 2610018I03Rik|Ube3d ubiquitin-conjugating enzyme E2C binding protein protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-17 chr2 170470192 170470421 + 1.4372489031793 NA Intergenic Intergenic -26122 NM_001013369 109054 Mm.28808 NM_001013369 ENSMUSG00000052033 Pfdn4 0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4 prefoldin 4 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-4 chr11 119916103 119916365 + 1.4372489031793 NA intron (NM_001085498, intron 4 of 7) intron (NM_001085498, intron 4 of 7) 2424 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-24 chr15 27995544 27995776 + 1.4372489031793 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 30188 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-14 chr16 26095859 26096166 + 1.4372489031793 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 9772 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-19 chr13 34709382 34709624 + 1.4372489031793 NA Intergenic Intergenic -30139 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793 chr1 87038576 87038894 + 1.4372489031793 NA intron (NM_001172157, intron 15 of 21) intron (NM_001172157, intron 15 of 21) 51193 NM_007433 11650 Mm.195224 NM_007433 ENSMUSG00000026246 Alppl2 Akp5|C77216|D1Ertd816e|EAP alkaline phosphatase, placental-like 2 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-5 chr12 69196735 69196957 + 1.4372489031793 NA promoter-TSS (NR_033222) promoter-TSS (NR_033222) -365 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-5 chr10 82872873 82873159 + 1.4372489031793 NA exon (NM_001042523, exon 2 of 15) exon (NM_001042523, exon 2 of 15) 6390 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-11 chr13 91039264 91039490 + 1.4372489031793 NA intron (NM_025770, intron 4 of 7) intron (NM_025770, intron 4 of 7) 116255 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-2 chr15 83169868 83170088 + 1.4372489031793 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 2230 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-20 chr13 70771044 70771398 + 1.4372489031793 NA intron (NM_172053, intron 13 of 22) intron (NM_172053, intron 13 of 22) 70590 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-46 chr4 129258718 129259115 + 1.4372489031793 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) 2488 NM_001285867 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-35 chr19 4438370 4438567 + 1.4372489031793 NA promoter-TSS (NR_045990) promoter-TSS (NR_045990) -855 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-27 chr15 79101507 79101790 + 1.4372489031793 NA Intergenic Intergenic -7335 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-41 chr2 167552346 167552592 + 1.4372489031793 NA Intergenic Intergenic 14274 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-34 chr18 75631945 75632311 + 1.4372489031793 NA intron (NM_201354, intron 2 of 11) intron (NM_201354, intron 2 of 11) 65568 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-20 chr3 144678909 144679165 + 1.4372489031793 NA Intergenic Intergenic 41298 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-31 chrX 12840185 12840418 + 1.4372489031793 NA Intergenic Intergenic 78023 NR_045852 552913 Mm.216846 NR_045852 ENSMUSG00000085891 Gm14634 - predicted gene 14634 ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-52 chr7 112207780 112207975 + 1.4372489031793 NA Intergenic Intergenic -17959 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-26 chr15 76091187 76091464 + 1.4372489031793 NA intron (NM_001358359, intron 1 of 17) intron (NM_001358359, intron 1 of 17) 365 NM_001358359 223649 Mm.101946 NM_144847 ENSMUSG00000075590 Nrbp2 BC011468 nuclear receptor binding protein 2 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-27 chr8 48109698 48109997 + 1.4372489031793 NA promoter-TSS (NM_001161515) promoter-TSS (NM_001161515) -111 NR_027759 320685 Mm.121549 NM_178788 ENSMUSG00000031562 Dctd 6030466N05Rik dCMP deaminase protein-coding common_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-3 chr3 66210079 66210315 + 1.4372489031793 NA intron (NM_145820, intron 5 of 13) intron (NM_145820, intron 5 of 13) -9690 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-12 chr15 5625866 5626147 + 1.4372489031793 NA Intergenic Intergenic 129688 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-18 chr13 34681957 34682226 + 1.4372489031793 NA Intergenic Intergenic 29168 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 - predicted gene 15908 ncRNA unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-6 chr12 99265980 99266183 + 1.4372489031793 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -103273 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-40 chr2 141265917 141266121 + 1.4372489031793 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -594543 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-3 chr10 59311251 59311541 + 1.4372489031793 NA Intergenic Intergenic -11900 NM_001316371 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-15 chr2 36216880 36217145 + 1.4372489031793 NA Intergenic Intergenic -13414 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-2 chr11 72842685 72842955 + 1.4372489031793 NA intron (NM_001045536, intron 9 of 54) intron (NM_001045536, intron 9 of 54) 46594 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-22 chr14 76569351 76569651 + 1.4372489031793 NA Intergenic Intergenic -12612 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-60 chr8 126739152 126739398 + 1.4372489031793 NA Intergenic Intergenic -109745 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-29 chr16 57552958 57553179 + 1.4372489031793 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 3826 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-23 chr6 30300706 30300985 + 1.4372489031793 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 3694 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-17 chr12 105686936 105687204 + 1.4372489031793 NA intron (NM_178613, intron 1 of 2) intron (NM_178613, intron 1 of 2) 1718 NM_178613 66787 Mm.248019 NM_178613 ENSMUSG00000044715 Gskip 4933433P14Rik GSK3B interacting protein protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-3 chr11 79306040 79306262 + 1.4372489031793 NA Intergenic Intergenic -33741 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-28 chr15 98953685 98953972 + 1.4372489031793 NA promoter-TSS (NM_011653) promoter-TSS (NM_011653) -327 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-21 chr14 25468625 25469027 + 1.4372489031793 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 9641 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-48 chr5 121838162 121838472 + 1.4372489031793 NA Intergenic Intergenic -1458 NM_008507 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793 chr1 131090020 131090266 + 1.4372489031793 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 7700 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-16 chr2 70907760 70908027 + 1.4372489031793 NA Intergenic Intergenic -82413 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-43 chr3 117863815 117864102 + 1.4372489031793 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 4978 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-29 chr9 35095997 35096308 + 1.4372489031793 NA intron (NM_009178, intron 1 of 10) intron (NM_009178, intron 1 of 10) -20576 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-4 chr10 80954635 80954954 + 1.4372489031793 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 24703 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-9 chr11 96729048 96729275 + 1.4372489031793 NA intron (NM_001033186, intron 10 of 12) intron (NM_001033186, intron 10 of 12) 48394 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-13 chr11 116825014 116825262 + 1.4372489031793 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 2908 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-10 chr13 46241868 46242144 + 1.4372489031793 NA Intergenic Intergenic -31715 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-18 chr3 88635043 88635307 + 1.4372489031793 NA intron (NM_001198913, intron 9 of 21) intron (NM_001198913, intron 9 of 21) 13781 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-9 chr13 41663043 41663457 + 1.4372489031793 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 57034 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-22 chr6 17172990 17173333 + 1.4372489031793 NA Intergenic Intergenic -1328 NR_153844 232599 Mm.430719 NM_177689 Gm4876 B930018B01|EG232599 predicted gene 4876 ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-58 chr8 111540858 111541162 + 1.4372489031793 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 2667 NM_001168623 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-42 chr3 37959775 37959991 + 1.4372489031793 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 61070 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-53 chr7 130650897 130651299 + 1.4372489031793 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -41458 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-21 chr4 134627748 134628047 + 1.4372489031793 NA intron (NM_207237, intron 2 of 11) intron (NM_207237, intron 2 of 11) -60046 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-25 chr7 89743470 89743839 + 1.4372489031793 NA intron (NM_181407, intron 3 of 13) intron (NM_181407, intron 3 of 13) 110836 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-28 chr9 23029378 23029706 + 1.4372489031793 NA Intergenic Intergenic -193534 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-12 chr11 115699154 115699442 + 1.4372489031793 NA 5' UTR (NM_008163, exon 2 of 6) 5' UTR (NM_008163, exon 2 of 6) 236 NM_001313937 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-32 chr18 38210139 38210435 + 1.4372489031793 NA promoter-TSS (NM_029357) promoter-TSS (NM_029357) -525 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-57 chr8 68276164 68276461 + 1.4372489031793 NA promoter-TSS (NM_028182) promoter-TSS (NM_028182) -216 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-15 chr12 85287432 85287749 + 1.4372489031793 NA Intergenic Intergenic -1001 NM_172414 72350 Mm.158810 NM_172414 ENSMUSG00000045064 Zc2hc1c 2810002I04Rik|AV046379|Fam164c zinc finger, C2HC-type containing 1C protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-23 chr14 121392431 121392677 + 1.4372489031793 NA Intergenic Intergenic -13324 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-2 chr10 28115383 28115641 + 1.4372489031793 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 40692 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-45 chr4 95934050 95934306 + 1.4372489031793 NA Intergenic Intergenic 32857 NR_045777 319247 Mm.473527 NM_175680 ENSMUSG00000044125 9530080O11Rik - RIKEN cDNA 9530080O11 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-38 chr2 20654889 20655231 + 1.4372489031793 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 135547 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793 chr1 189890142 189890373 + 1.4372489031793 NA intron (NM_026796, intron 6 of 11) intron (NM_026796, intron 6 of 11) 32034 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-51 chr6 108115866 108116145 + 1.4372489031793 NA intron (NM_145937, intron 8 of 8) B2_Mm2|SINE|B2 50960 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-11 chr11 103246857 103247164 + 1.4372489031793 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 20391 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-7 chr11 35936256 35936538 + 1.4372489031793 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 43692 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-31 chr17 78603664 78603978 + 1.4372489031793 NA intron (NM_001197028, intron 8 of 12) intron (NM_001197028, intron 8 of 12) 95758 NM_028813 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-49 chr6 39003341 39003615 + 1.4372489031793 NA intron (NM_011539, intron 5 of 12) intron (NM_011539, intron 5 of 12) 64108 NR_040523 69986 Mm.490941 NR_040523 ENSMUSG00000100121 1700025N23Rik - RIKEN cDNA 1700025N23 gene ncRNA unique_peak1_17_5_1.31380372752479_3.24186436448355_1.4372489031793-6 chr10 86307785 86308130 + 1.4372489031793 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 7545 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-24 chr7 16370154 16370414 + 1.4372489031793 NA intron (NM_019748, intron 3 of 8) intron (NM_019748, intron 3 of 8) 17612 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak2_5_15_-1.67501439440826_3.16249280279587_1.4372489031793-19 chr3 107715141 107715394 + 1.4372489031793 NA Intergenic Intergenic -18707 NM_145542 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak2_232_148_0.347795914092166_7.39306647750824_1.43724189573345 chr6 43264651 43266904 + 1.43724189573345 NA intron (NM_133674, intron 1 of 14) intron (NM_133674, intron 1 of 14) 133 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak1_147_88_0.441117350944556_6.69629210643868_1.4372302497311 chr8 71591743 71593029 + 1.4372302497311 NA exon (NM_025396, exon 1 of 5) exon (NM_025396, exon 1 of 5) 202 NM_001294269 66171 Mm.282284 NM_025396 ENSMUSG00000031807 Pgls 1110030K05Rik|AI447866|Plgs 6-phosphogluconolactonase protein-coding common_peak2_165_100_0.42305715856588_6.86974006203473_1.4371900896674 chr3 96104267 96105638 + 1.4371900896674 NA intron (NM_001025614, intron 1 of 11) intron (NM_001025614, intron 1 of 11) 425 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak1_156_94_0.431561702693458_6.78563645967768_1.43622305832489 chr11 102316404 102318085 + 1.43622305832489 NA promoter-TSS (NM_001044383) promoter-TSS (NM_001044383) 43 NM_001044383 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_114_128_-0.455772034446365_6.78334123820007_1.43622305832487 chr8 124897901 124898864 + 1.43622305832487 NA promoter-TSS (NM_198103) promoter-TSS (NM_198103) 496 NM_001111141 244666 Mm.482915 NM_001111141 ENSMUSG00000031986 Sprtn Gm505 SprT-like N-terminal domain protein-coding common_peak2_114_128_-0.455772034446365_6.78334123820007_1.43622305832487 chr13 15463057 15464703 + 1.43622305832487 NA 5' UTR (NM_008130, exon 1 of 15) 5' UTR (NM_008130, exon 1 of 15) 157 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_183_113_0.395853328485025_7.03081667840725_1.43510997446322 chr13 37825754 37827972 + 1.43510997446322 NA promoter-TSS (NR_033615) promoter-TSS (NR_033615) -49 NM_001177868 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_183_113_0.395853328485025_7.03081667840725_1.43510997446322-2 chr2 181364245 181366293 + 1.43510997446322 NA promoter-TSS (NM_001048148) promoter-TSS (NM_001048148) 135 NM_001165991 76688 Mm.87720 NM_029702 ENSMUSG00000038671 Arfrp1 1500006I01Rik|AI480700 ADP-ribosylation factor related protein 1 protein-coding common_peak2_93_108_-0.501578001048116_6.51739532425287_1.43436086981469 chr11 51262757 51263891 + 1.43436086981469 NA promoter-TSS (NM_001358279) promoter-TSS (NM_001358279) 210 NM_007714 12750 Mm.239354 NM_007714 ENSMUSG00000020385 Clk4 AI987988|C85119 CDC like kinase 4 protein-coding unique_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-5 chr3 57343634 57344316 + 1.43262124146305 NA Intergenic Intergenic -41987 NM_001355130 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-8 chr6 112888285 112888765 + 1.43262124146305 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 58741 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-10 chr7 112143343 112143620 + 1.43262124146305 NA intron (NM_001360261, intron 3 of 6) intron (NM_001360261, intron 3 of 6) 15215 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-4 chr2 135737058 135737555 + 1.43262124146305 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) -27532 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305 chr10 79554407 79555074 + 1.43262124146305 NA intron (NM_001316699, intron 1 of 13) CpG 388 NM_001316699 70427 Mm.334193 NM_027422 ENSMUSG00000042570 Mier2 2700087H15Rik|mKIAA1193 MIER family member 2 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-5 chr4 45451936 45452542 + 1.43262124146305 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -43473 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305-6 chr9 6608588 6609466 + 1.43262124146305 NA Intergenic Intergenic -342480 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-3 chr17 32946962 32947263 + 1.43262124146305 NA intron (NM_130882, intron 1 of 12) intron (NM_130882, intron 1 of 12) 249 NM_130882 170716 Mm.254838 NM_130882 ENSMUSG00000024055 Cyp4f13 0610030I10Rik|Cypf13 cytochrome P450, family 4, subfamily f, polypeptide 13 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-7 chr5 134963252 134963525 + 1.43262124146305 NA Intergenic B1_Mus1|SINE|Alu -16454 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding unique_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305 chr10 19151061 19151827 + 1.43262124146305 NA intron (NR_038021, intron 1 of 3) L1MA8|LINE|L1 9695 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-6 chr4 136185715 136186406 + 1.43262124146305 NA intron (NM_177733, intron 5 of 6) intron (NM_177733, intron 5 of 6) 5278 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding unique_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305-5 chr7 110296993 110297814 + 1.43262124146305 NA Intergenic Intergenic 75700 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_19_33_-1.03776589827867_4.56857989211101_1.43262124146305 chr12 79472125 79472480 + 1.43262124146305 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 174951 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_19_33_-1.03776589827867_4.56857989211101_1.43262124146305-3 chr19 8785886 8786287 + 1.43262124146305 NA intron (NM_001177798, intron 1 of 11) intron (NM_001177798, intron 1 of 11) 230 NM_146092 225895 Mm.220886 NM_146092 ENSMUSG00000003680 Taf6l 2810417N14Rik|BB223262|C530024J06Rik|Paf65a TATA-box binding protein associated factor 6 like protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-11 chr7 144581049 144581523 + 1.43262124146305 NA intron (NM_010175, intron 1 of 1) intron (NM_010175, intron 1 of 1) 1150 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-3 chr15 81300132 81300761 + 1.43262124146305 NA Intergenic Intergenic -48584 NR_077230 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak2_19_33_-1.03776589827867_4.56857989211101_1.43262124146305-2 chr12 79948697 79949096 + 1.43262124146305 NA Intergenic Intergenic -12632 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-4 chr18 62161334 62162065 + 1.43262124146305 NA Intergenic MIR|SINE|MIR 18282 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding unique_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305 chr11 88067503 88068151 + 1.43262124146305 NA promoter-TSS (NM_016686) promoter-TSS (NM_016686) -452 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding unique_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305-2 chr13 52025696 52026221 + 1.43262124146305 NA Intergenic Intergenic -70783 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305-4 chr4 62744442 62744987 + 1.43262124146305 NA Intergenic Intergenic 70740 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305-3 chr2 121354773 121355236 + 1.43262124146305 NA Intergenic Intergenic -2772 NM_001355069 12716 Mm.252145 NM_009897 ENSMUSG00000000308 Ckmt1 Mt-CK|ScCKmit|U-MtCK|UbCKmit|mi-CK|mia-CK creatine kinase, mitochondrial 1, ubiquitous protein-coding common_peak1_20_33_-0.967873165657715_4.60352625842148_1.43262124146305 chr17 80290320 80290537 + 1.43262124146305 NA promoter-TSS (NM_001163759) promoter-TSS (NM_001163759) 48 NM_198942 106794 Mm.12412 NM_198942 ENSMUSG00000035051 Dhx57 AW494914 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 protein-coding common_peak1_19_33_-1.03776589827867_4.56857989211101_1.43262124146305-2 chr7 67617549 67617981 + 1.43262124146305 NA intron (NM_027413, intron 5 of 5) intron (NM_027413, intron 5 of 5) 27471 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_20_33_-0.967873165657715_4.60352625842148_1.43262124146305 chrX 164011992 164012575 + 1.43262124146305 NA intron (NM_181315, intron 2 of 7) intron (NM_181315, intron 2 of 7) 15727 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding unique_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-2 chr15 61984142 61984503 + 1.43262124146305 NA Intergenic Intergenic -1019 NM_001177354 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-2 chr15 85699885 85700386 + 1.43262124146305 NA Intergenic Intergenic -3638 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak2_19_33_-1.03776589827867_4.56857989211101_1.43262124146305 chr1 164248423 164248824 + 1.43262124146305 NA promoter-TSS (NM_054087) promoter-TSS (NM_054087) -423 NM_001276455 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA|ThTr-1 solute carrier family 19 (thiamine transporter), member 2 protein-coding unique_peak2_19_33_-1.03776589827867_4.56857989211101_1.43262124146305-2 chr9 65671646 65672123 + 1.43262124146305 NA Intergenic Intergenic -4664 NM_010952 18247 Mm.116749 NM_010952 ENSMUSG00000040652 Oaz2 AZ-2|AZ2|Oaz2-ps|Sez15 ornithine decarboxylase antizyme 2 protein-coding common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-9 chr7 16580862 16581364 + 1.43262124146305 NA intron (NM_172739, intron 1 of 6) intron (NM_172739, intron 1 of 6) -32711 NR_136928 102634559 Mm.421602 NR_136928 ENSMUSG00000100583 Gm29443 - predicted gene 29443 ncRNA common_peak1_39_17_0.872716961956118_4.60628348242037_1.43262124146305-6 chr5 113214394 113215054 + 1.43262124146305 NA Intergenic Intergenic -12185 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak2_19_33_-1.03776589827867_4.56857989211101_1.43262124146305 chr1 193400738 193401199 + 1.43262124146305 NA Intergenic Intergenic -30686 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_231_236_-0.32794018666748_7.72477315556452_1.43199657116194 chr8 111725971 111727856 + 1.43199657116194 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 5223 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_57_73_-0.634540344251683_5.89218319350311_1.43077784553669-2 chr1 172376577 172377213 + 1.43077784553669 NA exon (NM_026234, exon 1 of 1) exon (NM_026234, exon 1 of 1) 364 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding common_peak2_58_73_-0.61005228030627_5.90442722547581_1.43077784553669 chr15 55557383 55558123 + 1.43077784553669 NA promoter-TSS (NM_026759) promoter-TSS (NM_026759) 345 NM_001168250 105837 Mm.390829 NM_134092 ENSMUSG00000022369 Mtbp AI429604|MDM2BP Mdm2, transformed 3T3 cell double minute p53 binding protein protein-coding common_peak2_57_73_-0.634540344251683_5.89218319350311_1.43077784553669 chr1 92906902 92907731 + 1.43077784553669 NA exon (NM_175118, exon 1 of 2) exon (NM_175118, exon 1 of 2) 327 NM_175118 67446 Mm.46179 NM_175118 ENSMUSG00000047067 Dusp28 0710001B24Rik|AV005521 dual specificity phosphatase 28 protein-coding common_peak2_57_73_-0.634540344251683_5.89218319350311_1.43077784553669-3 chr11 79071002 79071812 + 1.43077784553669 NA intron (NM_013571, intron 2 of 17) intron (NM_013571, intron 2 of 17) -11571 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak2_69_84_-0.565089923165143_6.12684597455513_1.43069130240683 chr6 128362212 128362988 + 1.43069130240683 NA promoter-TSS (NM_008021) promoter-TSS (NM_008021) 222 NM_001326586 72440 Mm.143908 NM_197981 ENSMUSG00000048668 Rhno1 2510047L19Rik|5930416I19Rik RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding common_peak1_102_57_0.539606369930655_6.1277841800929_1.43069130240682-2 chr15 97247425 97248274 + 1.43069130240682 NA promoter-TSS (NM_001164563) promoter-TSS (NM_001164563) -562 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_102_57_0.539606369930655_6.1277841800929_1.43069130240682 chr12 69296793 69297881 + 1.43069130240682 NA intron (NM_027117, intron 1 of 12) CpG 656 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding common_peak2_102_57_0.539606369930655_6.1277841800929_1.43069130240682 chr18 6765285 6765696 + 1.43069130240682 NA intron (NM_181070, intron 1 of 6) CpG 323 NM_001278447 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak1_43_58_-0.703467646764781_5.53090922597945_1.42954500397924 chr8 25017401 25017902 + 1.42954500397924 NA promoter-TSS (NM_007404) promoter-TSS (NM_007404) 440 NM_027194 69742 Mm.28626 NM_027194 ENSMUSG00000031556 Tm2d2 2410018G23Rik|Blp1 TM2 domain containing 2 protein-coding common_peak1_70_36_0.655167376077781_5.53703705366784_1.42954500397923 chr17 73709830 73710562 + 1.42954500397923 NA 5' UTR (NM_027864, exon 1 of 15) 5' UTR (NM_027864, exon 1 of 15) 255 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_140_83_0.455124503177505_6.61987967436751_1.42899477322863 chr1 172148116 172148761 + 1.42899477322863 NA intron (NM_001357204, intron 1 of 13) CpG 423 NM_001357204 98193 Mm.159915 NM_153555 ENSMUSG00000026554 Dcaf8 AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a DDB1 and CUL4 associated factor 8 protein-coding common_peak1_75_90_-0.545686165226794_6.2349515575853_1.42747456741467 chr2 60695000 60695903 + 1.42747456741467 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -21758 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_74_90_-0.564660175818934_6.22546455228923_1.42747456741467-2 chr4 88721692 88722521 + 1.42747456741467 NA 5' UTR (NM_172871, exon 1 of 1) 5' UTR (NM_172871, exon 1 of 1) 402 NM_172871 242521 Mm.260601 NM_172871 ENSMUSG00000070923 Klhl9 8030469P05|C530050O22Rik|mKIAA1354 kelch-like 9 protein-coding common_peak2_74_90_-0.564660175818934_6.22546455228923_1.42747456741467 chr3 79885689 79886734 + 1.42747456741467 NA 5' UTR (NM_133187, exon 1 of 4) 5' UTR (NM_133187, exon 1 of 4) 281 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_74_90_-0.564660175818934_6.22546455228923_1.42747456741467-3 chr9 111404206 111404913 + 1.42747456741467 NA Intergenic Intergenic -34522 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak2_109_62_0.514497398277777_6.23452862263881_1.42747456741466 chr3 158035714 158036545 + 1.42747456741466 NA promoter-TSS (NM_001289524) promoter-TSS (NM_001289524) 510 NM_001093752 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak1_117_67_0.504883264499096_6.33990447349989_1.42738992380169 chr7 19358870 19360246 + 1.42738992380169 NA promoter-TSS (NM_145822) promoter-TSS (NM_145822) -75 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding common_peak2_117_67_0.504883264499096_6.33990447349989_1.42738992380169 chr19 21778376 21779116 + 1.42738992380169 NA 5' UTR (NM_031997, exon 1 of 25) 5' UTR (NM_031997, exon 1 of 25) 406 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_81_96_-0.52895327458669_6.33543620489378_1.42738992380167 chr10 4109800 4111285 + 1.42738992380167 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 102578 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_59_29_0.716586970017366_5.2651840806172_1.42714050806394-3 chr15 102840116 102840650 + 1.42714050806394 NA Intergenic Intergenic -80748 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding common_peak2_59_29_0.716586970017366_5.2651840806172_1.42714050806394 chr11 73047835 73048414 + 1.42714050806394 NA intron (NM_025818, intron 1 of 12) CpG 257 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding common_peak1_59_29_0.716586970017366_5.2651840806172_1.42714050806394-2 chr14 120373444 120374223 + 1.42714050806394 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 67381 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak2_59_29_0.716586970017366_5.2651840806172_1.42714050806394-3 chr3 81027689 81028243 + 1.42714050806394 NA Intergenic B1_Mm|SINE|Alu -8450 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_59_29_0.716586970017366_5.2651840806172_1.42714050806394 chr5 151174138 151174869 + 1.42714050806394 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 15690 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_59_29_0.716586970017366_5.2651840806172_1.42714050806394-2 chr3 15214476 15215243 + 1.42714050806394 NA Intergenic Intergenic 117443 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_59_29_0.716586970017366_5.2651840806172_1.42714050806394-5 chr9 54733830 54734461 + 1.42714050806394 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 404 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding common_peak1_59_29_0.716586970017366_5.2651840806172_1.42714050806394 chr14 67716229 67716822 + 1.42714050806394 NA promoter-TSS (NM_001110162) promoter-TSS (NM_001110162) 427 NM_001285933 105440 Mm.6720 NM_134073 ENSMUSG00000034327 Kctd9 - potassium channel tetramerisation domain containing 9 protein-coding common_peak1_59_29_0.716586970017366_5.2651840806172_1.42714050806394-4 chr3 27863660 27864196 + 1.42714050806394 NA Intergenic Intergenic 32440 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding common_peak2_82_44_0.596470524561243_5.7900883586103_1.4264948003859 chr19 8818775 8819326 + 1.4264948003859 NA promoter-TSS (NM_001081196) promoter-TSS (NM_001081196) 244 NM_027412 70387 Mm.261082 NM_027412 ENSMUSG00000071660 Ttc9c 2210019E14Rik|6330408J23Rik tetratricopeptide repeat domain 9C protein-coding unique_peak1_82_44_0.596470524561243_5.7900883586103_1.4264948003859 chr1 74043023 74043816 + 1.4264948003859 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 81028 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_53_68_-0.63597760587801_5.79053565383916_1.4264948003859 chr9 109875798 109876680 + 1.4264948003859 NA intron (NM_007658, intron 1 of 14) CpG 660 NM_007658 12530 Mm.307103 NM_007658 ENSMUSG00000032477 Cdc25a D9Ertd393e cell division cycle 25A protein-coding common_peak2_82_44_0.596470524561243_5.7900883586103_1.4264948003859-2 chr5 140610707 140611224 + 1.4264948003859 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 3624 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_52_68_-0.662754401508309_5.77714725602401_1.4264948003859 chr1 135862619 135863408 + 1.4264948003859 NA Intergenic Intergenic 22152 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak2_52_68_-0.662754401508309_5.77714725602401_1.4264948003859-2 chr2 68861694 68862653 + 1.4264948003859 NA intron (NM_001347161, intron 1 of 10) CpG 732 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_52_68_-0.662754401508309_5.77714725602401_1.4264948003859 chr1 106401733 106402358 + 1.4264948003859 NA Intergenic Intergenic 144586 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_139_151_-0.41068148004427_7.04258677342145_1.42649434699135 chr8 110940385 110941727 + 1.42649434699135 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 21191 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak1_184_114_0.391017629720457_7.0409988658046_1.42649434699135 chr8 71680480 71682801 + 1.42649434699135 NA exon (NM_010589, exon 10 of 25) exon (NM_010589, exon 10 of 25) 5257 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding common_peak2_108_122_-0.463819620210794_6.71060469523384_1.42637094666733 chr19 53552136 53553474 + 1.42637094666733 NA Intergenic Intergenic 23487 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_148_89_0.434644300195592_6.70917524642747_1.42637094666733 chr15 75923940 75924957 + 1.42637094666733 NA TTS (NM_031201) TTS (NM_031201) -2888 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak2_47_63_-0.696179333127994_5.651910333436_1.42573967311544 chr9 102775644 102776584 + 1.42573967311544 NA Intergenic Intergenic 36466 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_76_40_0.623282447553105_5.66919322839464_1.42573967311544 chr3 27695423 27695867 + 1.42573967311544 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 14807 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_48_63_-0.666641856633945_5.66667907168303_1.42573967311544 chr17 24886697 24887384 + 1.42573967311544 NA promoter-TSS (NM_001355396) promoter-TSS (NM_001355396) 366 NM_001163751 79043 Mm.274794 NM_027141 ENSMUSG00000024160 Spsb3 2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204 splA/ryanodine receptor domain and SOCS box containing 3 protein-coding common_peak1_76_40_0.623282447553105_5.66919322839464_1.42573967311544-2 chr18 60608891 60609794 + 1.42573967311544 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 762 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_76_40_0.623282447553105_5.66919322839464_1.42573967311544 chr14 25520080 25520766 + 1.42573967311544 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -14016 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_94_109_-0.499594339798879_6.53156254362522_1.42212604788856 chr18 33461185 33462716 + 1.42212604788856 NA intron (NM_001109988, intron 3 of 4) intron (NM_001109988, intron 3 of 4) 1684 NM_001267717 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding common_peak2_395_266_0.266040716217926_8.19371628979652_1.42170276389887 chr5 136565066 136567961 + 1.42170276389887 NA promoter-TSS (NM_001291233) promoter-TSS (NM_001291233) -532 NM_001291233 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_341_227_0.283834685688825_7.97480735700915_1.42135470411447 chr3 145702961 145705416 + 1.42135470411447 NA Intergenic Intergenic -54203 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_63_79_-0.605998009816055_6.01892908997934_1.42039180492404 chr15 58378220 58379004 + 1.42039180492404 NA intron (NM_027211, intron 1 of 8) intron (NM_027211, intron 1 of 8) 10662 NM_027211 69787 Mm.237985 NM_027211 Anxa13 1810034H17Rik|AV055219 annexin A13 protein-coding common_peak1_96_53_0.55672305224761_6.03324902828727_1.42039180492404 chr14 63131385 63132846 + 1.42039180492404 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 9653 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_64_79_-0.583788001251615_6.03003409426156_1.42039180492404-2 chr3 53100373 53101701 + 1.42039180492404 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 59490 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_64_79_-0.583788001251615_6.03003409426156_1.42039180492404 chr17 72958674 72959620 + 1.42039180492404 NA Intergenic Intergenic 40842 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_64_79_-0.583788001251615_6.03003409426156_1.42039180492404 chr8 84968693 84969512 + 1.42039180492404 NA promoter-TSS (NM_011563) promoter-TSS (NM_011563) -520 NM_001317385 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding common_peak2_96_53_0.55672305224761_6.03324902828727_1.42039180492404 chr4 155216614 155217314 + 1.42039180492404 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 5571 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_64_79_-0.583788001251615_6.03003409426156_1.42039180492404-3 chr4 155992948 155993546 + 1.42039180492404 NA promoter-TSS (NM_001302469) promoter-TSS (NM_001302469) -90 NM_001302468 20318 Mm.293517 NM_011341 ENSMUSG00000029076 Sdf4 Cab45 stromal cell derived factor 4 protein-coding common_peak2_23_37_-0.937051866998336_4.77940157994442_1.41893667893732-3 chr8 121907055 121907399 + 1.41893667893732 NA promoter-TSS (NM_001033485) promoter-TSS (NM_001033485) 459 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak2_44_20_0.819050724647823_4.80184278510267_1.41893667893732-2 chr5 103780411 103780854 + 1.41893667893732 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 26059 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_44_20_0.819050724647823_4.80184278510267_1.41893667893732-4 chr16 33888187 33889047 + 1.41893667893732 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 58952 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_44_20_0.819050724647823_4.80184278510267_1.41893667893732 chr4 129189983 129190359 + 1.41893667893732 NA promoter-TSS (NM_029036) promoter-TSS (NM_029036) 376 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding unique_peak1_44_20_0.819050724647823_4.80184278510267_1.41893667893732-3 chr15 74604505 74605220 + 1.41893667893732 NA Intergenic Intergenic 31456 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak2_23_37_-0.937051866998336_4.77940157994442_1.41893667893732-2 chr15 78449031 78449560 + 1.41893667893732 NA intron (NM_001355601, intron 10 of 17) intron (NM_001355601, intron 10 of 17) 19339 NM_001355601 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_44_20_0.819050724647823_4.80184278510267_1.41893667893732 chr10 93756822 93757408 + 1.41893667893732 NA Intergenic Intergenic -73793 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA unique_peak1_44_20_0.819050724647823_4.80184278510267_1.41893667893732-2 chr14 70517340 70518236 + 1.41893667893732 NA intron (NR_033241, intron 1 of 19) intron (NR_033241, intron 1 of 19) 2472 NM_009755 12153 Mm.27757 NM_009755 ENSMUSG00000022098 Bmp1 Pcp|Tld bone morphogenetic protein 1 protein-coding common_peak2_44_20_0.819050724647823_4.80184278510267_1.41893667893732-3 chr8 94992515 94993038 + 1.41893667893732 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 8377 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak2_23_37_-0.937051866998336_4.77940157994442_1.41893667893732 chr1 127868860 127869354 + 1.41893667893732 NA intron (NM_178690, intron 2 of 23) intron (NM_178690, intron 2 of 23) 334 NM_178690 226407 Mm.489713 NM_178690 ENSMUSG00000036104 Rab3gap1 1700003B17Rik|4732493F09Rik|AL117896|Rab3gap|p130 RAB3 GTPase activating protein subunit 1 protein-coding unique_peak1_44_20_0.819050724647823_4.80184278510267_1.41893667893732 chr13 38345436 38346336 + 1.41893667893732 NA 5' UTR (NM_007556, exon 1 of 7) 5' UTR (NM_007556, exon 1 of 7) 170 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding common_peak1_44_20_0.819050724647823_4.80184278510267_1.41893667893732-2 chr12 102758136 102758515 + 1.41893667893732 NA promoter-TSS (NM_001142939) promoter-TSS (NM_001142939) 350 NM_025666 66622 Mm.34261 NM_025666 ENSMUSG00000041712 Ubr7 5730410I19Rik|AA589405|AW557761 ubiquitin protein ligase E3 component n-recognin 7 (putative) protein-coding common_peak1_54_26_0.743944799187471_5.1268599017572_1.41868709588403-3 chr15 59549479 59549933 + 1.41868709588403 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -98948 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_31_45_-0.800576891412462_5.12327351035078_1.41868709588403 chr7 142433575 142434014 + 1.41868709588403 NA Intergenic Intergenic -1056 NR_153437 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding common_peak1_54_26_0.743944799187471_5.1268599017572_1.41868709588403-2 chr15 53130072 53130554 + 1.41868709588403 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 215870 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_54_26_0.743944799187471_5.1268599017572_1.41868709588403 chr2 158214044 158214667 + 1.41868709588403 NA intron (NM_001131021, intron 4 of 15) intron (NM_001131021, intron 4 of 15) 14869 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_54_26_0.743944799187471_5.1268599017572_1.41868709588403 chr15 68165477 68166166 + 1.41868709588403 NA exon (NM_001145888, exon 10 of 16) exon (NM_001145888, exon 10 of 16) 93035 NR_152182 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding unique_peak2_30_45_-0.846057436930987_5.10053323759152_1.41868709588403 chr13 95260103 95260944 + 1.41868709588403 NA Intergenic Intergenic -10187 NM_001346782 218461 Mm.100167 NM_172263 ENSMUSG00000021684 Pde8b B230331L10Rik|C030047E14Rik phosphodiesterase 8B protein-coding common_peak1_31_45_-0.800576891412462_5.12327351035078_1.41868709588403 chr15 80022318 80022689 + 1.41868709588403 NA Intergenic Intergenic -7695 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_30_45_-0.846057436930987_5.10053323759152_1.41868709588403 chr16 13610670 13611397 + 1.41868709588403 NA intron (NM_001358453, intron 17 of 22) intron (NM_001358453, intron 17 of 22) 57137 NM_001358452 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding common_peak1_54_26_0.743944799187471_5.1268599017572_1.41868709588403 chr14 56885649 56886312 + 1.41868709588403 NA promoter-TSS (NM_029498) promoter-TSS (NM_029498) -623 NM_177627 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding unique_peak1_54_26_0.743944799187471_5.1268599017572_1.41868709588403-2 chr9 110623576 110624318 + 1.41868709588403 NA TTS (NM_183276) TTS (NM_183276) 446 NM_026012 67169 Mm.46680 NM_026012 ENSMUSG00000032491 Nradd 2610311B09Rik|BB104149|NRDD|NRH2|PLAIDD neurotrophin receptor associated death domain protein-coding common_peak2_54_26_0.743944799187471_5.1268599017572_1.41868709588403-2 chr3 129725039 129725444 + 1.41868709588403 NA promoter-TSS (NM_001310737) promoter-TSS (NM_001310737) -155 NM_001329594 13645 Mm.252481 NM_010113 ENSMUSG00000028017 Egf AI790464 epidermal growth factor protein-coding common_peak2_224_229_-0.328574963910401_7.68120256898917_1.41861008007556 chr19 28010975 28012448 + 1.41861008007556 NA promoter-TSS (NM_011265) promoter-TSS (NM_011265) -545 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_140_152_-0.409945916736387_7.05241488432446_1.41800906187613 chr14 31669353 31670601 + 1.41800906187613 NA Intergenic Intergenic 28920 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak2_140_152_-0.409945916736387_7.05241488432446_1.41800906187613-2 chr17 36271163 36271981 + 1.41800906187613 NA promoter-TSS (NM_178281) promoter-TSS (NM_178281) -139 NM_178281 79263 Mm.40624 NM_024468 ENSMUSG00000045409 Trim39 1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp tripartite motif-containing 39 protein-coding common_peak2_141_84_0.448174825995786_6.6334783491356_1.41761677518458 chr9 62559377 62560051 + 1.41761677518458 NA Intergenic Intergenic -22670 NM_175484 235431 Mm.335229 NM_175484 ENSMUSG00000041729 Coro2b CLIPINC|E130012P22Rik coronin, actin binding protein, 2B protein-coding common_peak2_354_345_-0.264460546322603_8.30239795447542_1.41709308491647 chr15 10712959 10715436 + 1.41709308491647 NA promoter-TSS (NM_030690) promoter-TSS (NM_030690) -99 NM_001356534 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_125_73_0.476861953044641_6.44788434215127_1.41688263066034 chr8 126613341 126614203 + 1.41688263066034 NA Intergenic Intergenic -20336 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_148_160_-0.40441948158935_7.12870713731994_1.41633679411404 chr13 55692846 55693889 + 1.41633679411404 NA intron (NM_181278, intron 1 of 1) CpG 243 NM_181278 78521 Mm.28449 NM_181278 ENSMUSG00000045767 B230219D22Rik AA119856|D530037I19Rik RIKEN cDNA B230219D22 gene protein-coding common_peak1_117_130_-0.441076895788015_6.81288455364344_1.41597594009842 chr15 103240033 103241091 + 1.41597594009842 NA promoter-TSS (NM_001076789) promoter-TSS (NM_001076789) 108 NR_002883 434858 Mm.391346 NR_002883 Gm5643 EG434858 heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo common_peak1_109_123_-0.462418988609181_6.72298681608228_1.41571809622601 chr14 32084791 32086335 + 1.41571809622601 NA promoter-TSS (NR_104305) promoter-TSS (NR_104305) 129 NR_104303 105638 Mm.2519 NM_172254 ENSMUSG00000021905 Dph3 DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2 diphthamine biosynthesis 3 protein-coding common_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038-2 chr11 84512969 84513479 + 1.4153097371038 NA intron (NM_019816, intron 1 of 12) intron (NM_019816, intron 1 of 12) 277 NM_019816 56321 Mm.257482 NM_019816 ENSMUSG00000018697 Aatf 4933415H02Rik|5830465M17Rik|Che-1|Trb apoptosis antagonizing transcription factor protein-coding common_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038-6 chr7 44986911 44987449 + 1.4153097371038 NA promoter-TSS (NM_019830) promoter-TSS (NM_019830) 280 NR_045266 100502630 Mm.490013 NR_045266 ENSMUSG00000087138 Gm15545 - predicted gene 15545 ncRNA unique_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038 chr10 77417394 77418154 + 1.4153097371038 NA promoter-TSS (NR_027377) promoter-TSS (NR_027377) 499 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding unique_peak2_27_41_-0.860618328986836_4.96200825828534_1.4153097371038 chr12 100279349 100279863 + 1.4153097371038 NA intron (NR_045741, intron 1 of 3) intron (NR_045741, intron 1 of 3) 2997 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038-2 chr4 55721362 55721937 + 1.4153097371038 NA Intergenic Intergenic -189174 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak2_27_41_-0.860618328986836_4.96200825828534_1.4153097371038-3 chr13 93998295 93998671 + 1.4153097371038 NA Intergenic Intergenic -59313 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038-4 chr17 88530342 88530818 + 1.4153097371038 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 456 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak1_27_41_-0.860618328986836_4.96200825828534_1.4153097371038 chr1 118660666 118660995 + 1.4153097371038 NA intron (NM_023755, intron 7 of 14) intron (NM_023755, intron 7 of 14) 32885 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak2_27_41_-0.860618328986836_4.96200825828534_1.4153097371038-2 chr13 6191502 6191930 + 1.4153097371038 NA Intergenic Intergenic 330227 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_27_41_-0.860618328986836_4.96200825828534_1.4153097371038 chr11 40692832 40693459 + 1.4153097371038 NA promoter-TSS (NM_134017) promoter-TSS (NM_134017) -463 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038 chr1 93173214 93173684 + 1.4153097371038 NA intron (NM_001310428, intron 1 of 31) intron (NM_001310428, intron 1 of 31) 5026 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding common_peak2_49_23_0.777336361431153_4.97363068143673_1.4153097371038 chr11 51937023 51937311 + 1.4153097371038 NA Intergenic Intergenic -30464 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038-5 chr5 145115996 145116375 + 1.4153097371038 NA intron (NM_023142, intron 1 of 9) intron (NM_023142, intron 1 of 9) 1929 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak2_27_41_-0.860618328986836_4.96200825828534_1.4153097371038-4 chr3 89391912 89392461 + 1.4153097371038 NA promoter-TSS (NM_001355211) promoter-TSS (NM_001355211) -117 NM_001355211 22724 Mm.262184 NM_009565 ENSMUSG00000028042 Zbtb7b Thpok|Zfp67|c-Krox zinc finger and BTB domain containing 7B protein-coding common_peak1_49_23_0.777336361431153_4.97363068143673_1.4153097371038-3 chr13 51202709 51203043 + 1.4153097371038 NA non-coding (NR_132443, exon 1 of 1) non-coding (NR_132443, exon 1 of 1) 190 NR_132443 667728 NR_132443 Hist1h2al EG667728 histone cluster 1, H2al pseudo common_peak1_103_58_0.528785165946783_6.14703563233523_1.41469833047472 chr14 57889427 57890205 + 1.41469833047472 NA intron (NM_029492, intron 1 of 12) CpG 520 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_82_97_-0.52638622322429_6.35151673250306_1.41359277277625 chr13 86045957 86046743 + 1.41359277277625 NA intron (NM_007749, intron 1 of 2) CpG 445 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak2_82_97_-0.52638622322429_6.35151673250306_1.41359277277625 chr5 105806418 105808293 + 1.41359277277625 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -69213 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_82_97_-0.52638622322429_6.35151673250306_1.41359277277625-2 chr17 34031764 34032542 + 1.41359277277625 NA promoter-TSS (NM_001205216) promoter-TSS (NM_001205216) -197 NM_001205216 20182 Mm.1243 NM_011306 ENSMUSG00000039656 Rxrb AL023085|H-2RIIBP|Nr2b2|RCoR-1|Rub retinoid X receptor beta protein-coding common_peak1_39_54_-0.73871775012623_5.41200083846154_1.41268768702114 chr16 30501876 30502756 + 1.41268768702114 NA Intergenic Intergenic 48262 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak2_39_54_-0.73871775012623_5.41200083846154_1.41268768702114-2 chr3 104359670 104360157 + 1.41268768702114 NA Intergenic Intergenic -139507 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak1_65_33_0.672548163574175_5.42373692303743_1.41268768702114 chr11 3370586 3371304 + 1.41268768702114 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) 459 NM_001361623 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding unique_peak1_65_33_0.672548163574175_5.42373692303743_1.41268768702114 chr7 101050930 101052154 + 1.41268768702114 NA Intergenic Intergenic -39489 NM_001302346 18442 Mm.3000 NM_008773 ENSMUSG00000032860 P2ry2 P2U1|P2Y2 purinergic receptor P2Y, G-protein coupled 2 protein-coding common_peak2_39_54_-0.73871775012623_5.41200083846154_1.41268768702114 chr18 56755803 56756589 + 1.41268768702114 NA Intergenic Intergenic 48383 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_65_33_0.672548163574175_5.42373692303743_1.41268768702114 chr5 105780798 105781299 + 1.41268768702114 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 80238 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_39_54_-0.73871775012623_5.41200083846154_1.41268768702114-3 chr4 62705378 62706465 + 1.41268768702114 NA Intergenic Intergenic 31947 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_110_63_0.504741363711653_6.25237068185583_1.41267963589689 chr7 18857641 18858619 + 1.41267963589689 NA intron (NM_153761, intron 4 of 5) intron (NM_153761, intron 4 of 5) 18164 NM_153760 243864 Mm.233503 NM_153760 ENSMUSG00000040987 Mill2 Micb MHC I like leukocyte 2 protein-coding common_peak2_110_63_0.504741363711653_6.25237068185583_1.41267963589689 chr3 27862756 27864087 + 1.41267963589689 NA Intergenic Intergenic 32947 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding common_peak2_89_49_0.560456978078615_5.92408467881403_1.41214593677718 chr8 49388719 49389497 + 1.41214593677718 NA Intergenic Intergenic -714418 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak2_167_177_-0.377308694093506_7.28707908391964_1.41052498563211 chr1 155051371 155052620 + 1.41052498563211 NA Intergenic Intergenic 31269 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak1_134_79_0.463220675193432_6.55353843248408_1.41015376676289 chr3 81031953 81033658 + 1.41015376676289 NA Intergenic Intergenic -3611 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_248_160_0.331187365430512_7.49651056082987_1.40970645491049 chr15 85656858 85658891 + 1.40970645491049 NA Intergenic Intergenic -45899 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_125_138_-0.432625754049917_6.90262819569855_1.40869975814354 chr8 79639361 79640568 + 1.40869975814354 NA exon (NM_001256033, exon 1 of 21) exon (NM_001256033, exon 1 of 21) 288 NM_001081164 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-8 chrX 13064999 13065640 + 1.40782320807777 NA Intergenic Intergenic -6179 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-3 chr15 3707978 3708398 + 1.40782320807777 NA Intergenic Intergenic -124836 NM_010284 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-7 chr6 134199967 134200382 + 1.40782320807777 NA intron (NM_001303102, intron 3 of 8) intron (NM_001303102, intron 3 of 8) 164474 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-2 chr16 21204975 21205333 + 1.40782320807777 NA 5' UTR (NM_010143, exon 1 of 16) 5' UTR (NM_010143, exon 1 of 16) 359 NM_010143 13845 Mm.6972 NM_010143 ENSMUSG00000005958 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777 chr1 71917387 71917856 + 1.40782320807777 NA Intergenic Intergenic 29509 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_35_15_0.891711248672705_4.44585562433635_1.40782320807777-2 chr4 146270361 146270600 + 1.40782320807777 NA promoter-TSS (NM_001083918).2 promoter-TSS (NM_001083918).2 95 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-5 chr18 11584387 11584986 + 1.40782320807777 NA Intergenic Intergenic -48590 NM_001252495 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding common_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-4 chr3 79906402 79906938 + 1.40782320807777 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 20740 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-4 chr17 35549912 35550189 + 1.40782320807777 NA intron (NM_001355275, intron 1 of 1) intron (NM_001355275, intron 1 of 1) -2078 NM_001008424 386463 Mm.426664 NM_001008424 ENSMUSG00000039518 Cdsn AI747712 corneodesmosin protein-coding common_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-3 chr19 3929343 3929632 + 1.40782320807777 NA intron (NM_026316, intron 1 of 9) intron (NM_026316, intron 1 of 9) 229 NM_026316 67689 Mm.109341 NM_026316 ENSMUSG00000024885 Aldh3b1 1700001N19Rik|ALDH4|ALDH7 aldehyde dehydrogenase 3 family, member B1 protein-coding common_peak2_35_15_0.891711248672705_4.44585562433635_1.40782320807777-3 chr8 123443022 123443254 + 1.40782320807777 NA promoter-TSS (NM_001281803) promoter-TSS (NM_001281803) -121 NM_001281803 23854 Mm.275127 NM_054046 ENSMUSG00000001482 Def8 AI449518|D8Ertd713e|DEF-8 differentially expressed in FDCP 8 protein-coding common_peak2_35_15_0.891711248672705_4.44585562433635_1.40782320807777 chr11 57801703 57802004 + 1.40782320807777 NA promoter-TSS (NR_131042) promoter-TSS (NR_131042) 216 NM_001081168 50724 Mm.340083 NM_001081168 ENSMUSG00000020519 Sap30l 2310079P12Rik|AF006998|L55 SAP30-like protein-coding unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-6 chr2 163419787 163420166 + 1.40782320807777 NA promoter-TSS (NM_025699) promoter-TSS (NM_025699) 205 NR_151490 108168734 Mm.440000 NR_151490 2900093K20Rik - RIKEN cDNA 2900093K20 gene ncRNA unique_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777-2 chr11 94929239 94929653 + 1.40782320807777 NA Intergenic Intergenic -6778 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak1_35_15_0.891711248672705_4.44585562433635_1.40782320807777 chr12 80211569 80212039 + 1.40782320807777 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 48567 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak2_17_30_-1.05543008214093_4.42648126931641_1.40782320807776-2 chr15 53171635 53171953 + 1.40782320807776 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 174389 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak2_17_30_-1.05543008214093_4.42648126931641_1.40782320807776 chr13 48552367 48552818 + 1.40782320807776 NA Intergenic Intergenic -14320 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak2_17_30_-1.05543008214093_4.42648126931641_1.40782320807776 chr1 155055030 155055323 + 1.40782320807776 NA Intergenic Intergenic 28088 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak1_17_30_-1.05543008214093_4.42648126931641_1.40782320807776 chr2 137663780 137664065 + 1.40782320807776 NA Intergenic Intergenic -547402 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_17_30_-1.05543008214093_4.42648126931641_1.40782320807776-2 chr11 61973912 61974179 + 1.40782320807776 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 17282 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak2_17_30_-1.05543008214093_4.42648126931641_1.40782320807776-3 chr6 115316700 115317349 + 1.40782320807776 NA Intergenic Intergenic -43927 NM_001127330 19016 Mm.3020 NM_011146 ENSMUSG00000000440 Pparg Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2 peroxisome proliferator activated receptor gamma protein-coding common_peak2_17_30_-1.05543008214093_4.42648126931641_1.40782320807776-3 chr9 49879299 49879915 + 1.40782320807776 NA Intergenic Intergenic -80214 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_54_69_-0.630450715594027_5.81405765914795_1.40644682976108-2 chr10 23177360 23178440 + 1.40644682976108 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 171990 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak2_54_69_-0.630450715594027_5.81405765914795_1.40644682976108 chr1 125434104 125434748 + 1.40644682976108 NA intron (NM_001205386, intron 2 of 12) intron (NM_001205386, intron 2 of 12) 1301 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_54_69_-0.630450715594027_5.81405765914795_1.40644682976108-3 chr13 106946741 106947897 + 1.40644682976108 NA intron (NM_025447, intron 1 of 11) CpG 190 NM_025447 66254 Mm.9563 NM_025447 ENSMUSG00000021692 Dimt1 1500031M22Rik|AV111347|Dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) protein-coding common_peak1_83_45_0.581917760389123_5.81452083625157_1.40644682976107-2 chr4 59580862 59581478 + 1.40644682976107 NA promoter-TSS (NM_024255) promoter-TSS (NM_024255) -393 NM_001301367 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding common_peak1_83_45_0.581917760389123_5.81452083625157_1.40644682976107-3 chr5 140515263 140516349 + 1.40644682976107 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 10197 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_83_45_0.581917760389123_5.81452083625157_1.40644682976107 chr11 102555459 102556124 + 1.40644682976107 NA intron (NM_001159492, intron 1 of 7) CpG 367 NM_001159492 237943 Mm.260282 NM_001159492 ENSMUSG00000034621 Gpatch8 5430405G24Rik|AU018890|Fbm1|Gpatc8|mKIAA0553 G patch domain containing 8 protein-coding common_peak1_83_45_0.581917760389123_5.81452083625157_1.40644682976107 chr10 77210633 77211312 + 1.40644682976107 NA Intergenic Intergenic -44442 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_71_37_0.636728755655875_5.56629189127152_1.40560368497293-2 chr3 122247029 122247555 + 1.40560368497293 NA intron (NM_008129, intron 1 of 6) intron (NM_008129, intron 1 of 6) 1735 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak1_71_37_0.636728755655875_5.56629189127152_1.40560368497293 chr3 108257279 108258284 + 1.40560368497293 NA intron (NM_011967, intron 1 of 8) intron (NM_011967, intron 1 of 8) 855 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding common_peak2_71_37_0.636728755655875_5.56629189127152_1.40560368497293 chr15 81272453 81273052 + 1.40560368497293 NA Intergenic Intergenic -20890 NR_077230 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak2_44_59_-0.695522448181935_5.55912937151755_1.40560368497292 chr18 60891759 60892268 + 1.40560368497292 NA Intergenic MIR3|SINE|MIR -20227 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_44_59_-0.695522448181935_5.55912937151755_1.40560368497292-2 chr2 32757232 32757724 + 1.40560368497292 NA exon (NM_001290563, exon 15 of 15) exon (NM_001290563, exon 15 of 15) 244 NM_152800 30933 Mm.200695 NM_152800 ENSMUSG00000009563 Tor2a Prosalusin torsin family 2, member A protein-coding common_peak2_308_203_0.298942645740942_7.82189666484197_1.40509061810891 chr8 109778033 109779842 + 1.40509061810891 NA 5' UTR (NM_009677, exon 1 of 24) 5' UTR (NM_009677, exon 1 of 24) 354 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak1_126_74_0.468820931078035_6.4632291560349_1.40422336003493 chr4 45453528 45454962 + 1.40422336003493 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -45479 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_77_41_0.607001374330563_5.69581810994404_1.40395959851644-2 chr3 101598889 101599836 + 1.40395959851644 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 5345 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_49_64_-0.660068950876146_5.69233333759038_1.40395959851644 chr11 116218125 116218804 + 1.40395959851644 NA intron (NR_004853, intron 6 of 6) intron (NR_004853, intron 6 of 6) 2462 NR_004853 69681 Mm.33677 NR_004853 ENSMUSG00000092300 Cdk3-ps 2310050O10Rik|Cdk3 cyclin-dependent kinase 3, pseudogene pseudo common_peak1_77_41_0.607001374330563_5.69581810994404_1.40395959851644 chr17 25015320 25015807 + 1.40395959851644 NA promoter-TSS (NM_020608) promoter-TSS (NM_020608) -333 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding common_peak2_49_64_-0.660068950876146_5.69233333759038_1.40395959851644-3 chr9 73039346 73040061 + 1.40395959851644 NA promoter-TSS (NM_018889) promoter-TSS (NM_018889) -4 NM_018889 55981 Mm.139905 NM_018889 ENSMUSG00000079469 Pigb Pig-b phosphatidylinositol glycan anchor biosynthesis, class B protein-coding common_peak2_77_41_0.607001374330563_5.69581810994404_1.40395959851644 chr11 8578693 8579763 + 1.40395959851644 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 85307 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_49_64_-0.660068950876146_5.69233333759038_1.40395959851644-2 chr16 49858336 49859678 + 1.40395959851644 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 3353 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_97_54_0.544943450268151_6.05383143865873_1.40346842354903-2 chr15 77893844 77895078 + 1.40346842354903 NA Intergenic Intergenic 34533 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_97_54_0.544943450268151_6.05383143865873_1.40346842354903-3 chr5 5685667 5686417 + 1.40346842354903 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 8047 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_97_54_0.544943450268151_6.05383143865873_1.40346842354903 chr15 41611312 41612179 + 1.40346842354903 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 162642 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_142_154_-0.408505852013104_7.07187147926768_1.40141782675522 chr11 53762435 53764576 + 1.40141782675522 NA TTS (NR_106131) TTS (NR_106131) 149 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak2_119_69_0.487139569107675_6.3728528014988_1.40013126863755-2 chr19 8981806 8983058 + 1.40013126863755 NA Intergenic Intergenic -6852 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_119_69_0.487139569107675_6.3728528014988_1.40013126863755 chr17 46281638 46282815 + 1.40013126863755 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 800 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak2_83_98_-0.523876903633473_6.36741816826287_1.40013126863755 chr17 42875619 42876890 + 1.40013126863755 NA intron (NM_009847, intron 1 of 17) CpG 170 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak1_119_69_0.487139569107675_6.3728528014988_1.40013126863755 chr4 151933779 151934811 + 1.40013126863755 NA intron (NM_172704, intron 1 of 15) CpG 575 NM_172704 230935 Mm.21353 NM_172704 ENSMUSG00000039768 Dnajc11 E030019A03Rik DnaJ heat shock protein family (Hsp40) member C11 protein-coding common_peak1_119_69_0.487139569107675_6.3728528014988_1.40013126863755-2 chr6 31219774 31221212 + 1.40013126863755 NA non-coding (NR_040257, exon 1 of 8) non-coding (NR_040257, exon 1 of 8) 142 NR_040259 73652 Mm.441297 NR_040257 ENSMUSG00000087380 2210408F21Rik - RIKEN cDNA 2210408F21 gene ncRNA common_peak2_170_104_0.409534161760691_6.91901259854647_1.3995189800139 chr9 85748623 85749963 + 1.3995189800139 NA promoter-TSS (NM_001081282) promoter-TSS (NM_001081282) 41 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding common_peak2_71_86_-0.558287226749267_6.16379988247409_1.39915453670325 chr3 51339534 51340704 + 1.39915453670325 NA intron (NM_023502, intron 1 of 9) CpG 525 NM_001356358 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak2_104_59_0.518246019591496_6.16601360540427_1.39915453670324 chr15 89076168 89076853 + 1.39915453670324 NA promoter-TSS (NR_040417) promoter-TSS (NR_040417) 446 NM_001355617 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak2_104_59_0.518246019591496_6.16601360540427_1.39915453670324-2 chr9 106377206 106377909 + 1.39915453670324 NA Intergenic Intergenic 8925 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak2_97_111_-0.481051758264793_6.56682904292521_1.39843562784283 chr1 46852365 46853375 + 1.39843562784283 NA intron (NM_001356416, intron 1 of 10) CpG 748 NM_001356416 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak1_60_30_0.692959758916001_5.30067618984488_1.39836854781782 chr17 44238222 44239172 + 1.39836854781782 NA intron (NM_172621, intron 2 of 5) intron (NM_172621, intron 2 of 5) 50125 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg|nmf318 chloride intracellular channel 5 protein-coding common_peak2_35_50_-0.780714093298791_5.2820682953221_1.39836854781781 chr1 92179399 92179955 + 1.39836854781781 NA intron (NM_207225, intron 1 of 26) CpG 664 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding unique_peak2_35_50_-0.780714093298791_5.2820682953221_1.39836854781781 chr19 4134893 4135452 + 1.39836854781781 NA TTS (NM_144532) TTS (NM_144532) 4437 NM_144532 73660 Mm.379226 NM_144532 ENSMUSG00000024842 Cabp4 2410038D05Rik calcium binding protein 4 protein-coding common_peak2_35_50_-0.780714093298791_5.2820682953221_1.39836854781781-2 chr5 138194031 138194669 + 1.39836854781781 NA promoter-TSS (NM_177878) promoter-TSS (NM_177878) 36 NM_177878 330216 Mm.19719 NM_177878 ENSMUSG00000049285 Mblac1 - metallo-beta-lactamase domain containing 1 protein-coding common_peak1_77_92_-0.539840013998707_6.26923880410868_1.3982704267089 chr15 10818365 10819363 + 1.3982704267089 NA Intergenic Intergenic -10187 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak1_112_64_0.507954888631797_6.27634525734435_1.39827042670888 chr7 141477001 141478117 + 1.39827042670888 NA intron (NM_001252588, intron 1 of 7) intron (NM_001252588, intron 1 of 7) 1179 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak1_375_252_0.269502789888012_8.11774496963832_1.39778114645336 chr14 25531126 25535413 + 1.39778114645336 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -1170 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_119_132_-0.438859849448549_6.83585251077692_1.39644105136991 chr1 86525139 86526492 + 1.39644105136991 NA promoter-TSS (NM_001360831) promoter-TSS (NM_001360831) -742 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_104_118_-0.469681148107929_6.65997718925398_1.39553862530246 chr11 59384728 59386209 + 1.39553862530246 NA Intergenic Intergenic -9815 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_144_86_0.444571444709174_6.66522921820332_1.39553862530246 chr5 142813066 142814314 + 1.39553862530246 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 3697 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_104_118_-0.469681148107929_6.65997718925398_1.39553862530246-2 chr8 31518246 31520638 + 1.39553862530246 NA Intergenic Intergenic 151693 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_111_125_-0.459690788854481_6.74743452907268_1.39500855141518 chr1 130734752 130736400 + 1.39500855141518 NA intron (NM_177604, intron 1 of 3) Lx8|LINE|L1 3600 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak2_112_125_-0.446957221839665_6.75380131258008_1.39500855141518-2 chr4 152258681 152260422 + 1.39500855141518 NA intron (NM_133348, intron 7 of 8) (TCCC)n|Simple_repeat|Simple_repeat -14811 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding common_peak2_111_125_-0.459690788854481_6.74743452907268_1.39500855141518-2 chr4 149995377 149996816 + 1.39500855141518 NA exon (NM_173371, exon 2 of 5) exon (NM_173371, exon 2 of 5) 7140 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_112_125_-0.446957221839665_6.75380131258008_1.39500855141518 chr3 129830390 129831803 + 1.39500855141518 NA intron (NM_026578, intron 1 of 6) CpG 300 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding common_peak2_152_92_0.425288271110086_6.75180294666307_1.39500855141515 chr3 69126128 69127024 + 1.39500855141515 NA intron (NM_008467, intron 1 of 16) CpG 516 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-23 chr5 5573736 5574019 + 1.39487600375387 NA promoter-TSS (NR_033499) promoter-TSS (NR_033499) 78 NR_033499 667705 Mm.376656 NR_033499 ENSMUSG00000073234 Gm8773 EG667705|Gm29287 predicted gene 8773 ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-64 chr8 94358482 94358672 + 1.39487600375387 NA intron (NM_019415, intron 24 of 24) intron (NM_019415, intron 24 of 24) -27852 NM_001357205 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-18 chr9 58593452 58593653 + 1.39487600375387 NA intron (NR_151824, intron 1 of 7) intron (NR_151824, intron 1 of 7) 11312 NM_001357751 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-28 chr17 23856046 23856233 + 1.39487600375387 NA exon (NM_027220, exon 3 of 5) exon (NM_027220, exon 3 of 5) 2367 NM_027220 69814 Mm.244143 NM_027220 ENSMUSG00000048992 Prss32 2010001P08Rik|mT5|tryptase-5 protease, serine 32 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-11 chr11 72158630 72158839 + 1.39487600375387 NA intron (NR_155065, intron 19 of 19) intron (NR_155065, intron 19 of 19) -22845 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-63 chr7 139840282 139840472 + 1.39487600375387 NA 5' UTR (NM_177469, exon 3 of 8) 5' UTR (NM_177469, exon 3 of 8) 6203 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-39 chr3 9445062 9445251 + 1.39487600375387 NA intron (NM_133218, intron 7 of 8) intron (NM_133218, intron 7 of 8) 42078 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-44 chr3 150789435 150789631 + 1.39487600375387 NA Intergenic Intergenic 234329 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-32 chr18 40140118 40140454 + 1.39487600375387 NA Intergenic B3A|SINE|B2 79113 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-14 chr3 98222628 98222858 + 1.39487600375387 NA intron (NM_026328, intron 1 of 5) intron (NM_026328, intron 1 of 5) 587 NM_026328 67709 Mm.46306 NM_026328 ENSMUSG00000027876 Reg4 2010002L15Rik|GISP|RELP regenerating islet-derived family, member 4 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-8 chr17 43052563 43052839 + 1.39487600375387 NA intron (NM_178589, intron 3 of 5) MIRb|SINE|MIR 36146 NM_178589 94185 Mm.200792 NM_178589 ENSMUSG00000023915 Tnfrsf21 AA959878|DR6|R74815|TR7 tumor necrosis factor receptor superfamily, member 21 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-24 chr5 14110473 14110681 + 1.39487600375387 NA intron (NM_011348, intron 1 of 16) intron (NM_011348, intron 1 of 16) 85301 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-35 chr2 29858628 29858892 + 1.39487600375387 NA Intergenic Intergenic -10734 NM_207298 99151 Mm.296336 NM_207298 ENSMUSG00000039787 Cercam 2600006K01Rik|AL024097|Ceecam1 cerebral endothelial cell adhesion molecule protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-17 chr12 27438120 27438328 + 1.39487600375387 NA Intergenic Intergenic -95506 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-50 chr4 155155158 155155419 + 1.39487600375387 NA 3' UTR (NM_011385, exon 7 of 7) 3' UTR (NM_011385, exon 7 of 7) 67247 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-43 chr3 102369967 102370184 + 1.39487600375387 NA Intergenic Intergenic -99844 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-29 chr17 79704782 79704972 + 1.39487600375387 NA Intergenic Intergenic 10164 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-15 chr5 136563785 136563990 + 1.39487600375387 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 2094 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-26 chr5 103755803 103756039 + 1.39487600375387 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 1348 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-10 chr15 80058446 80058678 + 1.39487600375387 NA Intergenic B1_Mus1|SINE|Alu 20017 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-25 chr15 81514429 81514623 + 1.39487600375387 NA Intergenic Intergenic 48210 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-31 chr8 108789168 108789397 + 1.39487600375387 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 74638 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-48 chr4 136443889 136444098 + 1.39487600375387 NA 3' UTR (NM_001285484, exon 2 of 2) 3' UTR (NM_001285484, exon 2 of 2) 19381 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-53 chr5 36679735 36679962 + 1.39487600375387 NA intron (NM_001081232, intron 1 of 8) intron (NM_001081232, intron 1 of 8) 16173 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak2_9_3_1.05675192254492_2.52837596127246_1.39487600375387 chr7 49317246 49317449 + 1.39487600375387 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 71158 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-16 chr6 37403515 37403727 + 1.39487600375387 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 38527 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-16 chr18 64992080 64992297 + 1.39487600375387 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) -31339 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-34 chr18 68474860 68475066 + 1.39487600375387 NA Intergenic Intergenic -45643 NM_001301372 17200 Mm.426053 NM_008560 ENSMUSG00000045569 Mc2r ACTH-R|ACTHR|MC2-R melanocortin 2 receptor protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-23 chr14 75866358 75866573 + 1.39487600375387 NA Intergenic Intergenic 18542 NR_028481 100303751 Mm.484707 NR_028481 ENSMUSG00000065147 Snora31 MBI-161 small nucleolar RNA, H/ACA box 31 snoRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-7 chr16 97061330 97061549 + 1.39487600375387 NA intron (NM_031174, intron 1 of 32) intron (NM_031174, intron 1 of 32) 109296 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-4 chr11 12087254 12087485 + 1.39487600375387 NA Intergenic Intergenic -49949 NM_010345 14783 Mm.273117 NM_010345 ENSMUSG00000020176 Grb10 5730571D09Rik|AI325020|Meg1|mKIAA0207 growth factor receptor bound protein 10 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-11 chr2 32234879 32235165 + 1.39487600375387 NA TTS (NM_001159634) TTS (NM_001159634) -1661 NM_145145 99011 Mm.31192 NM_145145 ENSMUSG00000039254 Pomt1 AI505244 protein-O-mannosyltransferase 1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-11 chr16 3723095 3723344 + 1.39487600375387 NA Intergenic MTD|LTR|ERVL-MaLR -5095 NM_001161791 54483 Mm.143718 NM_019453 ENSMUSG00000022534 Mefv FMF|TRIM20|pyrin Mediterranean fever protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-8 chr10 126986567 126986808 + 1.39487600375387 NA intron (NM_001113470, intron 1 of 7) intron (NM_001113470, intron 1 of 7) 7970 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-12 chr11 78181998 78182187 + 1.39487600375387 NA promoter-TSS (NR_037682) promoter-TSS (NR_037682) -336 NR_030702 100216539 NR_030702 ENSMUSG00000077625 Snord4a - small nucleolar RNA, C/D box 4A snoRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-61 chr7 37837505 37837696 + 1.39487600375387 NA Intergenic Intergenic -67848 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-46 chr4 95105413 95105643 + 1.39487600375387 NA Intergenic Intergenic -53306 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-9 chr15 55240887 55241178 + 1.39487600375387 NA intron (NM_001037937, intron 8 of 8) intron (NM_001037937, intron 8 of 8) -66718 NM_181277 12818 Mm.297859 NM_181277 ENSMUSG00000022371 Col14a1 5730412L22Rik|AW108078 collagen, type XIV, alpha 1 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-2 chr10 16978254 16978501 + 1.39487600375387 NA intron (NR_038020, intron 4 of 8) intron (NR_038020, intron 4 of 8) 117405 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387 chrX 13037974 13038206 + 1.39487600375387 NA Intergenic Intergenic -3925 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-21 chr2 118490917 118491187 + 1.39487600375387 NA Intergenic Intergenic -11356 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-22 chr4 139093209 139093413 + 1.39487600375387 NA promoter-TSS (NM_008675) promoter-TSS (NM_008675) -341 NM_008675 17965 Mm.9404 NM_008675 ENSMUSG00000041120 Nbl1 D4H1S1733E|DAN|Dana|NO3 neuroblastoma, suppression of tumorigenicity 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-3 chr10 19012173 19012418 + 1.39487600375387 NA promoter-TSS (NM_001166402) promoter-TSS (NM_001166402) -332 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-15 chr11 121720813 121721021 + 1.39487600375387 NA Intergenic Intergenic 18490 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-22 chrX 159817530 159817745 + 1.39487600375387 NA intron (NM_021389, intron 4 of 16) intron (NM_021389, intron 4 of 16) -22831 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-57 chr5 90593689 90593891 + 1.39487600375387 NA intron (NM_001252661, intron 13 of 13) intron (NM_001252661, intron 13 of 13) 32581 NM_001252661 622307 Mm.389654 NM_001252661 ENSMUSG00000070690 5830473C10Rik Arg|Gm17754 RIKEN cDNA 5830473C10 gene protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-2 chr10 98683912 98684120 + 1.39487600375387 NA Intergenic Intergenic -230626 NM_001359506 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-45 chr4 63113589 63113781 + 1.39487600375387 NA intron (NM_028326, intron 11 of 14) intron (NM_028326, intron 11 of 14) 40487 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-51 chr4 155623260 155623564 + 1.39487600375387 NA TTS (NM_177186) TTS (NM_177186) 1343 NR_040441 100502734 Mm.306018 NR_040441 ENSMUSG00000086682 Gm16023 - predicted gene 16023 ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-52 chr5 33955360 33955578 + 1.39487600375387 NA Intergenic B1_Mur3|SINE|Alu -19211 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-21 chr14 22936141 22936340 + 1.39487600375387 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 158331 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-9 chr18 57487311 57487552 + 1.39487600375387 NA Intergenic Intergenic 18945 NM_001134697 629147 Mm.57415 NM_001134697 ENSMUSG00000069372 Ctxn3 - cortexin 3 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-7 chr13 3695534 3695757 + 1.39487600375387 NA Intergenic Intergenic 61613 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-14 chr11 101010088 101010277 + 1.39487600375387 NA intron (NM_001243049, intron 1 of 20) intron (NM_001243049, intron 1 of 20) 730 NM_001243051 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-40 chr3 34080307 34080500 + 1.39487600375387 NA intron (NM_001026211, intron 1 of 5) intron (NM_001026211, intron 1 of 5) 951 NM_001026211 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387 chr1 75391875 75392074 + 1.39487600375387 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) 6364 NM_001085370 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-2 chr1 58858927 58859129 + 1.39487600375387 NA Intergenic Intergenic 56526 NM_001277926 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-56 chr5 73350057 73350269 + 1.39487600375387 NA Intergenic Intergenic -11216 NM_001310636 433904 Mm.274892 NM_026950 ENSMUSG00000029153 Ociad2 1810027I20Rik OCIA domain containing 2 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-36 chr2 125470075 125470281 + 1.39487600375387 NA intron (NM_007993, intron 4 of 65) intron (NM_007993, intron 4 of 65) 36260 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-18 chr13 32630181 32630393 + 1.39487600375387 NA Intergenic Intergenic 151492 NM_001166030 238564 Mm.60041 NM_001166030 ENSMUSG00000044951 Mylk4 EG238564 myosin light chain kinase family, member 4 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-20 chr9 108947207 108947408 + 1.39487600375387 NA intron (NM_025407, intron 7 of 12) intron (NM_025407, intron 7 of 12) -6438 NM_007738 12836 Mm.6200 NM_007738 ENSMUSG00000025650 Col7a1 AW209154 collagen, type VII, alpha 1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-30 chr8 106533295 106533591 + 1.39487600375387 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 22591 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-4 chr13 113840047 113840246 + 1.39487600375387 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 45638 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-6 chr10 79823452 79823645 + 1.39487600375387 NA intron (NM_030218, intron 1 of 4) intron (NM_030218, intron 1 of 4) 2527 NM_030218 78906 Mm.33087 NM_030218 ENSMUSG00000035852 Misp 9130017N09Rik mitotic spindle positioning protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-17 chr8 128101558 128101765 + 1.39487600375387 NA Intergenic Intergenic 176564 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-18 chr19 32186004 32186255 + 1.39487600375387 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 24884 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-55 chr5 72846002 72846227 + 1.39487600375387 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 22334 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-29 chr7 89681783 89682005 + 1.39487600375387 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 49076 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-49 chr4 137277024 137277227 + 1.39487600375387 NA promoter-TSS (NM_009523) promoter-TSS (NM_009523) -510 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-59 chr6 66999297 66999554 + 1.39487600375387 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -37174 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-3 chr13 52250361 52250563 + 1.39487600375387 NA Intergenic Intergenic 153721 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-19 chr9 75343755 75343968 + 1.39487600375387 NA intron (NM_010313, intron 11 of 12) intron (NM_010313, intron 11 of 12) -3897 NM_013479 12049 Mm.25988 NM_013479 ENSMUSG00000032191 Bcl2l10 AA420380|AU023065|Boo|C85687|Diva Bcl2-like 10 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-10 chr11 61915806 61916004 + 1.39487600375387 NA intron (NM_019921, intron 3 of 14) intron (NM_019921, intron 3 of 14) 14352 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-13 chr16 25746738 25746966 + 1.39487600375387 NA intron (NM_001127259, intron 1 of 13) intron (NM_001127259, intron 1 of 13) -55064 NM_001127263 22061 Mm.20894 NM_011641 ENSMUSG00000022510 Trp63 AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1 transformation related protein 63 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-22 chr14 47862561 47862807 + 1.39487600375387 NA Intergenic Intergenic -36180 NR_045959 73961 Mm.390702 NR_045959 ENSMUSG00000115609 4930447J18Rik 4930425M13Rik RIKEN cDNA 4930447J18 gene ncRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-10 chr19 9080737 9080964 + 1.39487600375387 NA Intergenic RMER17A|LTR|ERVK 7106 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-3 chr11 8662793 8663107 + 1.39487600375387 NA intron (NM_001083587, intron 1 of 30) MIR|SINE|MIR 1585 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387 chr1 46855661 46855876 + 1.39487600375387 NA intron (NM_001356417, intron 2 of 10) intron (NM_001356417, intron 2 of 10) -2150 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-19 chr2 27405467 27405708 + 1.39487600375387 NA intron (NM_009500, intron 1 of 27) intron (NM_009500, intron 1 of 27) 22021 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-38 chr2 167752806 167753036 + 1.39487600375387 NA Intergenic Intergenic 61744 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-54 chr5 66572077 66572336 + 1.39487600375387 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 46611 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-13 chr11 79082406 79082605 + 1.39487600375387 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) -22669 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-31 chr17 84180001 84180270 + 1.39487600375387 NA Intergenic Intergenic 7812 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-20 chr2 117715431 117715672 + 1.39487600375387 NA Intergenic Intergenic 97251 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-21 chr9 114854790 114854995 + 1.39487600375387 NA Intergenic Intergenic -10740 NM_027294 70031 Mm.150064 NM_027294 ENSMUSG00000041012 Cmtm8 2700018N07Rik|AA408515|Cklfsf8 CKLF-like MARVEL transmembrane domain containing 8 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-47 chr4 129206319 129206543 + 1.39487600375387 NA intron (NM_134151, intron 5 of 12) intron (NM_134151, intron 5 of 12) 16636 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-8 chr13 111789632 111789833 + 1.39487600375387 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 19261 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-5 chr10 77508960 77509177 + 1.39487600375387 NA intron (NM_133998, intron 2 of 5) intron (NM_133998, intron 2 of 5) 6745 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-4 chr10 67758248 67758444 + 1.39487600375387 NA Intergenic Intergenic 154316 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-9 chr11 49085893 49086108 + 1.39487600375387 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) -1017 NM_001271676 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-58 chr6 29319377 29319581 + 1.39487600375387 NA intron (NM_001289665, intron 1 of 6) intron (NM_001289665, intron 1 of 6) 339 NM_001289664 330277 Mm.87624 NM_207258 ENSMUSG00000039742 Fam71f1 GARI-L1|Gm764|NYD-SP18 family with sequence similarity 71, member F1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-16 chr12 11314822 11315122 + 1.39487600375387 NA intron (NM_001324476, intron 24 of 25) intron (NM_001324476, intron 24 of 25) 15085 NR_106136 102465775 NR_106136 ENSMUSG00000098879 Mir7675 Gm27965|mmu-mir-7675 microRNA 7675 ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-42 chr3 79551426 79551678 + 1.39487600375387 NA intron (NM_001162999, intron 1 of 16) B3|SINE|B2 16127 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387 chr1 194878853 194879063 + 1.39487600375387 NA Intergenic Intergenic 56957 NR_039539 100628615 NR_039539 ENSMUSG00000092633 Mir3962 mmu-mir-3962|mu-mir-3962 microRNA 3962 ncRNA unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-14 chr16 34963364 34963589 + 1.39487600375387 NA intron (NM_139300, intron 21 of 31) intron (NM_139300, intron 21 of 31) -4482 NR_045723 278725 Mm.436927 NR_045722 E130310I04Rik A930019C19Rik RIKEN cDNA E130310I04 gene ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-62 chr7 109568239 109568460 + 1.39487600375387 NA intron (NM_001001326, intron 2 of 19) intron (NM_001001326, intron 2 of 19) 48217 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-25 chr5 89459770 89460055 + 1.39487600375387 NA Intergenic Intergenic -2014 NM_008096 14473 Mm.196595 NM_008096 ENSMUSG00000035540 Gc DBP|VDB vitamin D binding protein protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-19 chr13 93983798 93983992 + 1.39487600375387 NA Intergenic Intergenic -73901 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-26 chr16 38742841 38743059 + 1.39487600375387 NA intron (NM_001285793, intron 1 of 6) intron (NM_001285793, intron 1 of 6) 691 NM_001285793 56375 Mm.182377 NM_019804 ENSMUSG00000022793 B4galt4 9130402O08Rik|B4galt-IV|b4Gal-T4|beta4Gal-T4|beta4GalT-IV UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-30 chr17 83377376 83377687 + 1.39487600375387 NA intron (NM_001357886, intron 1 of 21) ID_B1|SINE|B4 26600 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-27 chr6 147981504 147981707 + 1.39487600375387 NA Intergenic Intergenic -65811 NM_178797 330450 Mm.447274 NM_178797 ENSMUSG00000030303 Far2 A230046P18|AW048109|BC055759|Mlstd1 fatty acyl CoA reductase 2 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-12 chr3 32511394 32511627 + 1.39487600375387 NA intron (NM_001356625, intron 1 of 6) B1_Mus1|SINE|Alu 918 NM_144519 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-32 chr9 41546637 41546843 + 1.39487600375387 NA intron (NR_131930, intron 3 of 3) intron (NR_131930, intron 3 of 3) 10024 NR_029726 723965 NR_029726 ENSMUSG00000092770 Mirlet7a-2 Mirnlet7a-2|let-7a-2 microRNA let7a-2 ncRNA unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-17 chr19 9099223 9099441 + 1.39487600375387 NA Intergenic Intergenic -11376 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-33 chr18 57778659 57778898 + 1.39487600375387 NA non-coding (NR_152224, exon 3 of 4) non-coding (NR_152224, exon 3 of 4) 1217 NR_152224 100503033 Mm.381112 NR_152224 Gm19519 - predicted gene, 19519 ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-41 chr3 63814364 63814560 + 1.39487600375387 NA intron (NM_183191, intron 1 of 22) intron (NM_183191, intron 1 of 22) 36529 NM_001177733 269437 Mm.316391 NM_183191 ENSMUSG00000036834 Plch1 BC042549|PLC-eta-1|PLCeta1|Plcl3 phospholipase C, eta 1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-6 chr12 104411106 104411372 + 1.39487600375387 NA exon (NM_009252, exon 3 of 5) exon (NM_009252, exon 3 of 5) 4531 NM_009252 20716 Mm.482074 NM_009252 ENSMUSG00000021091 Serpina3n Spi2-2|Spi2.2|Spi2/eb.4 serine (or cysteine) peptidase inhibitor, clade A, member 3N protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-20 chr13 97008503 97008701 + 1.39487600375387 NA Intergenic Intergenic 25760 NM_025585 66479 Mm.390629 NM_025585 ENSMUSG00000052075 1700029F12Rik - RIKEN cDNA 1700029F12 gene protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-15 chr17 28835455 28835658 + 1.39487600375387 NA intron (NM_001081315, intron 11 of 12) intron (NM_001081315, intron 11 of 12) -22855 NM_001034885 433091 Mm.328925 NM_001034885 ENSMUSG00000043286 Pnpla1 - patatin-like phospholipase domain containing 1 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-65 chr9 96197086 96197315 + 1.39487600375387 NA intron (NM_178667, intron 1 of 13) intron (NM_178667, intron 1 of 13) 925 NM_001184708 211586 Mm.17977 NM_178667 ENSMUSG00000032411 Tfdp2 1110029I05Rik|A330080J22Rik|DP-3|DP3 transcription factor Dp 2 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-5 chr12 99363368 99363570 + 1.39487600375387 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 86605 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-37 chr2 152694856 152695047 + 1.39487600375387 NA intron (NM_010376, intron 9 of 11) intron (NM_010376, intron 9 of 11) 7803 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-24 chr14 118563904 118564144 + 1.39487600375387 NA intron (NM_001163676, intron 18 of 29) intron (NM_001163676, intron 18 of 29) 28448 NR_105815 102465208 NR_105815 ENSMUSG00000098433 Mir6391 Gm27914|mmu-mir-6391 microRNA 6391 ncRNA unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-13 chr3 37673107 37673349 + 1.39487600375387 NA Intergenic Intergenic 33281 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-6 chr16 38018704 38018924 + 1.39487600375387 NA intron (NR_040565, intron 1 of 3) intron (NR_040565, intron 1 of 3) 1491 NR_040565 75175 Mm.399335 NR_040565 4930542C21Rik - RIKEN cDNA 4930542C21 gene ncRNA unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-12 chr16 24731559 24731774 + 1.39487600375387 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 9811 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-60 chr6 72682711 72682904 + 1.39487600375387 NA intron (NM_001079822, intron 3 of 12) intron (NM_001079822, intron 3 of 12) 52976 NR_040421 100038714 Mm.321330 NR_040421 Gm15401 - predicted gene 15401 ncRNA unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-7 chr10 96689966 96690171 + 1.39487600375387 NA Intergenic Intergenic 73067 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-33 chr9 56148838 56149060 + 1.39487600375387 NA intron (NM_019793, intron 1 of 6) intron (NM_019793, intron 1 of 6) 12121 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak1_9_3_1.05675192254492_2.52837596127246_1.39487600375387-27 chr17 5207200 5207412 + 1.39487600375387 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 211461 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding unique_peak2_3_8_-1.42577499807803_2.4570375024033_1.39487600375387-5 chr15 64354816 64355082 + 1.39487600375387 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 27970 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak2_2_8_-1.83788441627733_2.25098279330365_1.39487600375387-28 chr7 74528490 74528706 + 1.39487600375387 NA intron (NM_001038643, intron 1 of 10) intron (NM_001038643, intron 1 of 10) 26182 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_91_50_0.563372980251516_5.95411183209725_1.39412279883297 chr3 108554190 108554710 + 1.39412279883297 NA promoter-TSS (NR_028538) promoter-TSS (NR_028538) -48 NR_028538 100217438 NR_028538 Scarna2 MBII-382 small Cajal body-specific RNA 2 ncRNA common_peak1_90_50_0.547716902484503_5.94628379321375_1.39412279883297 chr17 47293434 47294085 + 1.39412279883297 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 63529 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_90_50_0.547716902484503_5.94628379321375_1.39412279883297 chr5 3543912 3544441 + 1.39412279883297 NA intron (NM_001042501, intron 1 of 10) CpG 343 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_60_75_-0.600771444140709_5.94754179137323_1.39412279883296 chr12 16853511 16854273 + 1.39412279883296 NA Intergenic Intergenic -41086 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak2_60_75_-0.600771444140709_5.94754179137323_1.39412279883296-2 chr7 12922330 12923086 + 1.39412279883296 NA intron (NM_009095, intron 1 of 5) intron (NM_009095, intron 1 of 5) 397 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_189_118_0.379892630844594_7.08476407873024_1.39330624832244-2 chr2 145860155 145862096 + 1.39330624832244 NA exon (NM_028724, exon 9 of 13) exon (NM_028724, exon 9 of 13) -42116 NM_026425 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding common_peak1_189_118_0.379892630844594_7.08476407873024_1.39330624832244 chr13 107890662 107892427 + 1.39330624832244 NA Intergenic Intergenic -1480 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak2_91_105_-0.492122132340188_6.4818593883931_1.39184945330647 chr7 46845790 46846771 + 1.39184945330647 NA promoter-TSS (NM_001136069) promoter-TSS (NM_001136069) 476 NR_102727 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak2_128_75_0.472095639420058_6.48397533315361_1.39184945330647 chr5 137785676 137786651 + 1.39184945330647 NA 5' UTR (NM_144913, exon 1 of 4) 5' UTR (NM_144913, exon 1 of 4) 538 NM_144913 231803 Mm.61193 NM_144913 ENSMUSG00000029726 Mepce Bcdin3|D5Wsu46e methylphosphate capping enzyme protein-coding common_peak1_127_75_0.460947592054478_6.47840130947082_1.39184945330647 chr3 135629139 135630838 + 1.39184945330647 NA intron (NM_008689, intron 6 of 24) intron (NM_008689, intron 6 of 24) 61559 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-45 chr9 8104829 8105406 + 1.38887104242188 NA intron (NM_001045524, intron 4 of 10) intron (NM_001045524, intron 4 of 10) 29177 NM_001045524 234915 Mm.101341 NM_001045524 ENSMUSG00000040729 Cep126 mKIAA1377 centrosomal protein 126 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-2 chr1 169999192 169999495 + 1.38887104242188 NA intron (NM_022563, intron 7 of 16) intron (NM_022563, intron 7 of 16) 29934 NR_040438 67303 Mm.396611 NR_040438 ENSMUSG00000097503 3110045C21Rik AI838577 RIKEN cDNA 3110045C21 gene ncRNA common_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-2 chr2 13452030 13452389 + 1.38887104242188 NA intron (NM_001081084, intron 17 of 66) intron (NM_001081084, intron 17 of 66) 39667 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-10 chr15 34412943 34413217 + 1.38887104242188 NA intron (NM_001358780, intron 10 of 18) intron (NM_001358780, intron 10 of 18) 30145 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-29 chr4 63534526 63534817 + 1.38887104242188 NA Intergenic Intergenic -10094 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-31 chr5 74285220 74285469 + 1.38887104242188 NA intron (NM_001114660, intron 5 of 8) intron (NM_001114660, intron 5 of 8) 90018 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-17 chr5 33651144 33651430 + 1.38887104242188 NA intron (NM_001289724, intron 2 of 6) intron (NM_001289724, intron 2 of 6) 1287 NM_001289725 20492 Mm.4172 NM_009193 ENSMUSG00000004642 Slbp - stem-loop binding protein protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-21 chr7 90323031 90323398 + 1.38887104242188 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 20859 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-17 chr15 44618568 44618800 + 1.38887104242188 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) -543 NM_001357690 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-10 chr15 85420400 85420689 + 1.38887104242188 NA intron (NM_016843, intron 9 of 11) intron (NM_016843, intron 9 of 11) 82683 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-3 chr1 162103843 162104212 + 1.38887104242188 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 99058 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-14 chr14 76951821 76952115 + 1.38887104242188 NA Intergenic Intergenic 84649 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-13 chr16 58409114 58409424 + 1.38887104242188 NA intron (NM_001356484, intron 1 of 15) intron (NM_001356484, intron 1 of 15) 734 NM_028523 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-37 chr7 80773044 80773391 + 1.38887104242188 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 30114 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-23 chr9 59691980 59692258 + 1.38887104242188 NA Intergenic Intergenic -15518 NM_001357686 546134 Mm.297580 NM_001033498 ENSMUSG00000074259 Gramd2 BC064463|Gramd2a GRAM domain containing 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-28 chr4 9072893 9073175 + 1.38887104242188 NA Intergenic Intergenic -196259 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-8 chr14 76529071 76529385 + 1.38887104242188 NA Intergenic Intergenic -8373 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-34 chr6 72361400 72361637 + 1.38887104242188 NA exon (NM_001331167, exon 3 of 6) exon (NM_001331167, exon 3 of 6) 914 NM_001331171 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-21 chr7 37661470 37661846 + 1.38887104242188 NA intron (NM_172385, intron 2 of 5) intron (NM_172385, intron 2 of 5) 108094 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-5 chr13 37967540 37967801 + 1.38887104242188 NA Intergenic Intergenic 26538 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-2 chr1 150115218 150115439 + 1.38887104242188 NA Intergenic Intergenic 15297 NM_011198 19225 Mm.292547 NM_011198 ENSMUSG00000032487 Ptgs2 COX2|Cox-2|PES-2|PGHS-2|PHS II|PHS-2|Pghs2|TIS10|gripghs prostaglandin-endoperoxide synthase 2 protein-coding common_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-3 chr5 146974434 146974708 + 1.38887104242188 NA Intergenic Intergenic -10716 NM_001359467 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-22 chr2 166238855 166239280 + 1.38887104242188 NA Intergenic Intergenic -34841 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 - predicted gene 11468 ncRNA unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-18 chr5 110326721 110326991 + 1.38887104242188 NA intron (NM_011132, intron 39 of 48) intron (NM_011132, intron 39 of 48) 16179 NM_153400 231602 Mm.55948 NM_153400 ENSMUSG00000029503 P2rx2 P2X2a|P2x2 purinergic receptor P2X, ligand-gated ion channel, 2 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-20 chr7 48763325 48763637 + 1.38887104242188 NA Intergenic Intergenic -25522 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-46 chr9 57628016 57628430 + 1.38887104242188 NA exon (NM_007783, exon 10 of 13) exon (NM_007783, exon 10 of 13) -7449 NM_199222 235416 Mm.295630 NM_199222 ENSMUSG00000056271 Lman1l BC020188|slamp lectin, mannose-binding 1 like protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-12 chr16 8858599 8858887 + 1.38887104242188 NA 3' UTR (NM_001081400, exon 4 of 4) 3' UTR (NM_001081400, exon 4 of 4) 28643 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-5 chr12 40117630 40117910 + 1.38887104242188 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 16458 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-24 chr9 32713458 32713666 + 1.38887104242188 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 17520 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-2 chr5 35004315 35004532 + 1.38887104242188 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 5345 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-22 chr7 133114921 133115131 + 1.38887104242188 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 8457 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-11 chr14 70348884 70349387 + 1.38887104242188 NA promoter-TSS (NM_001135152) promoter-TSS (NM_001135152) -702 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-15 chr2 120629221 120629495 + 1.38887104242188 NA Intergenic Intergenic 19763 NM_001290807 66296 Mm.221900 NM_025475 ENSMUSG00000027285 Haus2 1700101G24Rik|2410007P03Rik|AU020217|Cep27 HAUS augmin-like complex, subunit 2 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-23 chr9 6665420 6665791 + 1.38887104242188 NA Intergenic RLTR51A_Mm|LTR|ERVK? -399058 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-4 chr8 22481226 22481589 + 1.38887104242188 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -4528 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188 chr1 36511966 36512171 + 1.38887104242188 NA exon (NM_053186, exon 1 of 8) exon (NM_053186, exon 1 of 8) 201 NM_053186 94218 Mm.256323 NM_053186 ENSMUSG00000001138 Cnnm3 Acdp3|Clp3|mACDP3 cyclin M3 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-19 chr6 30302004 30302238 + 1.38887104242188 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 2418 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-19 chr4 129226519 129227123 + 1.38887104242188 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) 1090 NM_001285866 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-3 chr11 8570486 8570759 + 1.38887104242188 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 93913 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-3 chr9 120577342 120577621 + 1.38887104242188 NA non-coding (NR_073359, exon 1 of 1) non-coding (NR_073359, exon 1 of 1) 150 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-26 chr3 128564851 128565284 + 1.38887104242188 NA Intergenic Intergenic -333462 NR_045704 402774 Mm.209170 NR_045704 ENSMUSG00000105816 D030025E07Rik - RIKEN cDNA D030025E07 gene ncRNA unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-4 chr11 58042590 58042973 + 1.38887104242188 NA exon (NM_028451, exon 7 of 19) exon (NM_028451, exon 7 of 19) 33717 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-32 chr5 113903500 113903743 + 1.38887104242188 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 5085 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188 chr12 105556496 105556823 + 1.38887104242188 NA Intergenic Intergenic -6513 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-16 chr3 122090256 122090555 + 1.38887104242188 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 45945 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-6 chr11 85384669 85385016 + 1.38887104242188 NA intron (NM_138681, intron 6 of 25) intron (NM_138681, intron 6 of 25) 31678 NM_001166643 192197 Mm.209989 NM_138681 ENSMUSG00000059439 Bcas3 1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira breast carcinoma amplified sequence 3 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188 chr1 59487848 59488083 + 1.38887104242188 NA Intergenic Intergenic 5818 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-22 chr8 123729254 123729585 + 1.38887104242188 NA Intergenic Intergenic -4539 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-15 chr17 71194219 71194535 + 1.38887104242188 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) -10277 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-24 chr3 38102798 38103081 + 1.38887104242188 NA Intergenic Intergenic 105180 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-25 chr3 55337321 55337652 + 1.38887104242188 NA intron (NM_001357475, intron 3 of 16) intron (NM_001357475, intron 3 of 16) 95122 NM_001357466 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-44 chr8 105517407 105517603 + 1.38887104242188 NA Intergenic Intergenic -1241 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-13 chr17 87530655 87530951 + 1.38887104242188 NA Intergenic Intergenic -83868 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-13 chr14 70766736 70767036 + 1.38887104242188 NA promoter-TSS (NM_023045) promoter-TSS (NM_023045) -258 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|exp7 exportin 7 protein-coding common_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188 chr17 29428044 29428232 + 1.38887104242188 NA Intergenic Intergenic -62907 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-3 chr10 127499668 127500149 + 1.38887104242188 NA TTS (NM_001168293) TTS (NM_001168293) -1778 NM_001359751 237611 Mm.32087 NM_177707 ENSMUSG00000040287 Stac3 9830125E18 SH3 and cysteine rich domain 3 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-8 chr11 95010432 95010654 + 1.38887104242188 NA 5' UTR (NM_146025, exon 1 of 10) 5' UTR (NM_146025, exon 1 of 10) 664 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-7 chr13 114446497 114446809 + 1.38887104242188 NA Intergenic Intergenic 12298 NM_001301373 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-30 chr4 150862603 150862873 + 1.38887104242188 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 7668 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-41 chr8 31375848 31376046 + 1.38887104242188 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 8198 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-14 chr17 6779214 6779473 + 1.38887104242188 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 3437 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-9 chr15 83570928 83571154 + 1.38887104242188 NA intron (NM_009775, intron 1 of 3) intron (NM_009775, intron 1 of 3) 7468 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-23 chr3 27472016 27472422 + 1.38887104242188 NA intron (NM_001356953, intron 12 of 26) intron (NM_001356953, intron 12 of 26) 100868 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|GHRP|GHS-R|Ghsr1a growth hormone secretagogue receptor protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-19 chr18 42274909 42275137 + 1.38887104242188 NA promoter-TSS (NM_172626) promoter-TSS (NM_172626) 174 NR_033452 100042757 Mm.100172 NR_033452 Gm4013 - predicted gene 4013 ncRNA unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-8 chr14 76817166 76817520 + 1.38887104242188 NA Intergenic Intergenic 57212 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-14 chr18 75599224 75599550 + 1.38887104242188 NA intron (NM_201354, intron 6 of 11) intron (NM_201354, intron 6 of 11) 84742 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188 chr1 74273825 74274139 + 1.38887104242188 NA Intergenic Intergenic -4618 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-18 chr17 30197704 30198004 + 1.38887104242188 NA intron (NM_001356265, intron 5 of 5) intron (NM_001356265, intron 5 of 5) 192815 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-17 chr19 7136092 7136414 + 1.38887104242188 NA intron (NM_134147, intron 3 of 10) intron (NM_134147, intron 3 of 10) -30524 NM_201411 396184 Mm.386930 NM_201411 ENSMUSG00000047787 Flrt1 AW742165|D630040I23Rik fibronectin leucine rich transmembrane protein 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-40 chr8 26972595 26972928 + 1.38887104242188 NA Intergenic Intergenic -4575 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-9 chr15 6410301 6410553 + 1.38887104242188 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 23679 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-49 chrX 169980656 169980965 + 1.38887104242188 NA intron (NM_010797, intron 4 of 9) intron (NM_010797, intron 4 of 9) -1893 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-4 chr10 25274964 25275231 + 1.38887104242188 NA intron (NM_018747, intron 3 of 7) intron (NM_018747, intron 3 of 7) 24066 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-11 chr15 98177101 98177318 + 1.38887104242188 NA Intergenic Intergenic 9403 NM_177716 239650 Mm.54140 NM_177716 ENSMUSG00000029875 Ccdc184 5630400A08|AI836003 coiled-coil domain containing 184 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-5 chr11 75680059 75680261 + 1.38887104242188 NA intron (NM_001277221, intron 1 of 1) intron (NM_001277221, intron 1 of 1) 901 NM_001277221 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-36 chr6 142341355 142341892 + 1.38887104242188 NA Intergenic Intergenic -4074 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-27 chr3 145618743 145618971 + 1.38887104242188 NA Intergenic Intergenic 31128 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-42 chr8 49348390 49348618 + 1.38887104242188 NA Intergenic Intergenic -673814 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-10 chr14 31659164 31659470 + 1.38887104242188 NA intron (NM_025295, intron 1 of 3) B4A|SINE|B4 18260 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-4 chr11 44616626 44617012 + 1.38887104242188 NA Intergenic Intergenic -1281 NM_001290711 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding common_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188 chr1 153331317 153331531 + 1.38887104242188 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 1362 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-33 chr6 34870090 34870323 + 1.38887104242188 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 7060 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-16 chr18 56707262 56707545 + 1.38887104242188 NA promoter-TSS (NM_010721) promoter-TSS (NM_010721) -410 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-21 chr2 165867413 165867653 + 1.38887104242188 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) -9360 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-7 chr11 91857516 91857998 + 1.38887104242188 NA Intergenic Intergenic -280202 NM_028547 73470 Mm.67677 NM_028547 ENSMUSG00000046755 Kif2b 1700063D03Rik kinesin family member 2B protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-7 chr14 70329598 70329851 + 1.38887104242188 NA intron (NM_144808, intron 2 of 9) intron (NM_144808, intron 2 of 9) 18709 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-20 chr5 136966321 136966740 + 1.38887104242188 NA TTS (NM_025562) TTS (NM_025562) -1339 NM_021719 60363 Mm.87202 NM_021719 ENSMUSG00000001739 Cldn15 2210009B08Rik|BB107105 claudin 15 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-47 chrX 7670701 7670998 + 1.38887104242188 NA intron (NM_019755, intron 1 of 4) intron (NM_019755, intron 1 of 4) 541 NM_019755 18824 Mm.18565 NM_019755 ENSMUSG00000031146 Plp2 mIMA4 proteolipid protein 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-15 chr14 101784203 101784584 + 1.38887104242188 NA intron (NM_201529, intron 1 of 30) intron (NM_201529, intron 1 of 30) 54465 NM_201529 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-12 chr17 79716139 79716725 + 1.38887104242188 NA Intergenic MIRc|SINE|MIR -1391 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-6 chr12 112976481 112976798 + 1.38887104242188 NA promoter-TSS (NM_201646) promoter-TSS (NM_201646) 76 NM_201646 399566 Mm.440140 NM_201646 ENSMUSG00000002803 Btbd6 - BTB (POZ) domain containing 6 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-43 chr8 69038728 69038947 + 1.38887104242188 NA exon (NM_153054, exon 17 of 17) exon (NM_153054, exon 17 of 17) -49899 NM_007509 11966 Mm.249096 NM_007509 ENSMUSG00000006273 Atp6v1b2 AI194269|AI790362|Atp6b2|HO57|R74844 ATPase, H+ transporting, lysosomal V1 subunit B2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-9 chr14 20245571 20245836 + 1.38887104242188 NA Intergenic Intergenic 23459 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-12 chr14 70545383 70545676 + 1.38887104242188 NA 5' UTR (NM_180588, exon 1 of 8) 5' UTR (NM_180588, exon 1 of 8) 278 NM_180588 72549 Mm.46742 NM_180588 ENSMUSG00000033589 Reep4 2700029E10Rik receptor accessory protein 4 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-35 chr6 91689764 91690015 + 1.38887104242188 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 5822 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-20 chr19 4155216 4155522 + 1.38887104242188 NA intron (NM_016933, intron 1 of 1) intron (NM_016933, intron 1 of 1) 723 NM_016933 19265 Mm.271937 NM_016933 ENSMUSG00000045826 Ptprcap AI605264|CD-45-AP|LPAP|LSM-1 protein tyrosine phosphatase, receptor type, C polypeptide-associated protein protein-coding unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-11 chr15 78483992 78484301 + 1.38887104242188 NA intron (NM_008368, intron 8 of 9) L2b|LINE|L2 10920 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-39 chr7 114178867 114179213 + 1.38887104242188 NA Intergenic Intergenic -61259 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-16 chr15 10634251 10634487 + 1.38887104242188 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 34076 NR_033541 100038608 Mm.450744 NR_033541 ENSMUSG00000115667 Gm10389 - predicted gene 10389 ncRNA unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-2 chr1 92904309 92904536 + 1.38887104242188 NA Intergenic Intergenic -1516 NM_001347091 241158 Mm.108280 NM_172850 ENSMUSG00000034212 Ankmy1 4930483I10Rik|ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-48 chrX 12959690 12959927 + 1.38887104242188 NA Intergenic Intergenic -18065 NR_153101 75037 Mm.387976 NR_153101 4930500G05Rik - RIKEN cDNA 4930500G05 gene ncRNA unique_peak2_8_18_-1.34210630562439_3.57687436063139_1.38887104242188-18 chr19 9026578 9026868 + 1.38887104242188 NA intron (NM_001039959, intron 4 of 5) intron (NM_001039959, intron 4 of 5) 37439 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding unique_peak1_21_7_1.1862303821703_3.59311519108515_1.38887104242188-38 chr7 98558795 98559105 + 1.38887104242188 NA Intergenic Intergenic 64728 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_7_18_-1.51083248965254_3.49251126861731_1.38887104242188-6 chr13 115090398 115090665 + 1.38887104242188 NA promoter-TSS (NM_134058) promoter-TSS (NM_134058) -373 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota mRNA surveillance and ribosome rescue factor protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-14 chr6 34639400 34640005 + 1.38791538138627 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 41198 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627 chr17 47628469 47629021 + 1.38791538138627 NA Intergenic Intergenic -1945 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-2 chr12 113144119 113144885 + 1.38791538138627 NA intron (NM_024223, intron 5 of 6) intron (NM_024223, intron 5 of 6) 3897 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-8 chr3 28804730 28805297 + 1.38791538138627 NA promoter-TSS (NM_026517) promoter-TSS (NM_026517) -495 NR_154889 68028 Mm.21724 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding common_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-5 chr9 66060252 66060496 + 1.38791538138627 NA exon (NM_011149, exon 1 of 5) exon (NM_011149, exon 1 of 5) 205 NM_011149 19035 Mm.335249 NM_011149 ENSMUSG00000032383 Ppib AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b peptidylprolyl isomerase B protein-coding common_peak1_15_27_-1.07731487783981_4.2686974831377_1.38791538138627 chr10 116996987 116997349 + 1.38791538138627 NA intron (NM_001007583, intron 4 of 9) intron (NM_001007583, intron 4 of 9) 10854 NM_001007583 382427 Mm.339322 NM_001007583 ENSMUSG00000020169 Best3 Vmd2l3|mBest4 bestrophin 3 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-12 chr5 66546641 66547079 + 1.38791538138627 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 71957 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-9 chr3 98045963 98046610 + 1.38791538138627 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 32748 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_32_13_0.959711062340154_4.28721045322768_1.38791538138627 chr12 112952760 112953034 + 1.38791538138627 NA Intergenic Intergenic -10755 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding unique_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-2 chr4 135828727 135828990 + 1.38791538138627 NA Intergenic Intergenic -27213 NM_001284196 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-5 chr15 74948883 74949411 + 1.38791538138627 NA Intergenic Intergenic -5904 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-15 chr8 119412928 119413324 + 1.38791538138627 NA Intergenic Intergenic 18234 NM_019966 56690 Mm.423037 NM_019966 ENSMUSG00000074064 Mlycd AI324784|Mcd malonyl-CoA decarboxylase protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-6 chr15 81158405 81158910 + 1.38791538138627 NA intron (NM_001082536, intron 1 of 13) intron (NM_001082536, intron 1 of 13) 32100 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-2 chr14 31781171 31781715 + 1.38791538138627 NA intron (NM_001024604, intron 1 of 27) intron (NM_001024604, intron 1 of 27) 48972 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-10 chr3 159883535 159884212 + 1.38791538138627 NA intron (NM_001356350, intron 2 of 12) intron (NM_001356350, intron 2 of 12) 44223 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-7 chr17 56031993 56032585 + 1.38791538138627 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 4348 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-4 chr8 72134850 72135058 + 1.38791538138627 NA promoter-TSS (NM_001001491) promoter-TSS (NM_001001491) -338 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627 chr1 153559990 153560472 + 1.38791538138627 NA Intergenic Intergenic -10517 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-13 chr5 137628287 137628560 + 1.38791538138627 NA promoter-TSS (NM_001168652) promoter-TSS (NM_001168652) -700 NM_001168652 231798 Mm.200763 NM_146164 ENSMUSG00000093445 Lrch4 2810008P14Rik|2900069C24Rik|AI558103|LRN|LRRN4|SAP25|mFLJ00248 leucine-rich repeats and calponin homology (CH) domain containing 4 protein-coding unique_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-4 chr8 128690689 128691073 + 1.38791538138627 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 5227 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-3 chr6 31079677 31079917 + 1.38791538138627 NA Intergenic Intergenic -16704 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-3 chr13 64154297 64154959 + 1.38791538138627 NA Intergenic Intergenic -1429 NM_175494 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding common_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-2 chrX 153434271 153434837 + 1.38791538138627 NA Intergenic B3A|SINE|B2 -63678 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-11 chr4 154160952 154161531 + 1.38791538138627 NA promoter-TSS (NM_026388) promoter-TSS (NM_026388) -557 NM_026388 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding common_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627 chr10 116996944 116997324 + 1.38791538138627 NA intron (NM_001007583, intron 4 of 9) intron (NM_001007583, intron 4 of 9) 10820 NM_001007583 382427 Mm.339322 NM_001007583 ENSMUSG00000020169 Best3 Vmd2l3|mBest4 bestrophin 3 protein-coding unique_peak2_15_27_-1.07731487783981_4.2686974831377_1.38791538138627-3 chr6 115891865 115892358 + 1.38791538138627 NA intron (NM_001167763, intron 13 of 28) intron (NM_001167763, intron 13 of 28) 38583 NM_031177 81896 Mm.333335 NM_031177 ENSMUSG00000030323 Ift122 C86139|Wdr10|sopb intraflagellar transport 122 protein-coding unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-4 chr14 55590562 55590832 + 1.38791538138627 NA intron (NM_001029855, intron 1 of 10) intron (NM_001029855, intron 1 of 10) 324 NM_011190 19188 Mm.371573 NM_011190 ENSMUSG00000079197 Psme2 AA589371|AI788882|PA28b proteasome (prosome, macropain) activator subunit 2 (PA28 beta) protein-coding common_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627 chr6 31149154 31149553 + 1.38791538138627 NA intron (NR_110471, intron 2 of 3) intron (NR_110471, intron 2 of 3) 69121 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA unique_peak1_32_13_0.959711062340154_4.28721045322768_1.38791538138627-16 chr9 69458662 69459171 + 1.38791538138627 NA intron (NM_007585, intron 1 of 12) ERVB4_1B-I_MM-int|LTR|ERVK 1972 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763-3 chr8 121239173 121239478 + 1.38760417247763 NA Intergenic Intergenic 111640 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-4 chr3 55651661 55652306 + 1.38760417247763 NA intron (NM_030595, intron 49 of 57) intron (NM_030595, intron 49 of 57) -130527 NM_010750 17116 Mm.440209 NM_010750 ENSMUSG00000056947 Mab21l1 AW047968 mab-21-like 1 (C. elegans) protein-coding unique_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763-3 chr12 69777245 69777928 + 1.38760417247763 NA intron (NM_183294, intron 2 of 9) intron (NM_183294, intron 2 of 9) -12758 NR_033573 74724 Mm.399254 NR_033573 4930512B01Rik 4930472D12Rik RIKEN cDNA 4930512B01 gene ncRNA unique_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-3 chr16 4878594 4879225 + 1.38760417247763 NA intron (NM_145359, intron 1 of 2) intron (NM_145359, intron 1 of 2) 942 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak2_40_18_0.830087033730097_4.66297103030863_1.38760417247763 chr2 24975373 24975701 + 1.38760417247763 NA promoter-TSS (NM_146251) promoter-TSS (NM_146251) -439 NM_001031808 107733 Mm.23010 NM_001031808 ENSMUSG00000036850 Mrpl41 MRP-L27|Rpml27 mitochondrial ribosomal protein L41 protein-coding common_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763-2 chr18 38419669 38420138 + 1.38760417247763 NA intron (NM_001355749, intron 1 of 7) intron (NM_001355749, intron 1 of 7) 996 NM_001355749 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding unique_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-5 chr8 71488789 71489221 + 1.38760417247763 NA intron (NM_032544, intron 1 of 8) CpG 902 NM_032544 70359 Mm.142112 NM_032544 ENSMUSG00000007610 Gtpbp3 2410009F13Rik|AI607903 GTP binding protein 3 protein-coding unique_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763-4 chr2 164833192 164833852 + 1.38760417247763 NA promoter-TSS (NM_008906) promoter-TSS (NM_008906) 74 NM_001082974 415115 Mm.474586 NM_001082974 ENSMUSG00000039873 Neurl2 Neur2|Ozz|Ozz-E3 neuralized E3 ubiquitin protein ligase 2 protein-coding unique_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763 chr11 77813553 77814188 + 1.38760417247763 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 12572 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-2 chr14 47370719 47371619 + 1.38760417247763 NA Intergenic Intergenic -2691 NM_010705 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding unique_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763-2 chr11 103339919 103340380 + 1.38760417247763 NA exon (NM_133715, exon 2 of 16) exon (NM_133715, exon 2 of 16) 4553 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-4 chrX 99530693 99531019 + 1.38760417247763 NA Intergenic Intergenic -60121 NM_008853 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding common_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-3 chrX 96020119 96020458 + 1.38760417247763 NA Intergenic Intergenic -63314 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding common_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763 chr10 17347187 17347819 + 1.38760417247763 NA Intergenic MIRc|SINE|MIR -251721 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-6 chr8 121851325 121851812 + 1.38760417247763 NA Intergenic Intergenic -21999 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763-2 chr5 125340276 125340942 + 1.38760417247763 NA intron (NM_001205083, intron 1 of 10) intron (NM_001205083, intron 1 of 10) 485 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak2_21_34_-0.943052634774662_4.65775669955764_1.38760417247763 chr11 86201449 86201862 + 1.38760417247763 NA promoter-TSS (NM_178309) promoter-TSS (NM_178309) 295 NR_130958 74038 Mm.171304 NR_130958 ENSMUSG00000085208 Brip1os 4632419I22Rik BRCA1 interacting protein C-terminal helicase 1, opposite strand ncRNA common_peak1_40_18_0.830087033730097_4.66297103030863_1.38760417247763 chr5 31179342 31179847 + 1.38760417247763 NA intron (NM_027901, intron 1 of 18) CpG 550 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000106864 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding common_peak2_32_46_-0.787522867279879_5.1608274180377_1.38733277998641-2 chr15 100403436 100404166 + 1.38733277998641 NA intron (NM_008732, intron 9 of 16) intron (NM_008732, intron 9 of 16) 19254 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak2_55_27_0.717289192161076_5.16599951813814_1.38733277998641 chr16 57230826 57231359 + 1.38733277998641 NA intron (NM_026254, intron 1 of 17) intron (NM_026254, intron 1 of 17) 374 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak2_32_46_-0.787522867279879_5.1608274180377_1.38733277998641 chr1 6279248 6279650 + 1.38733277998641 NA Intergenic Intergenic 64787 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak1_55_27_0.717289192161076_5.16599951813814_1.38733277998641-2 chr8 122460374 122461030 + 1.38733277998641 NA promoter-TSS (NM_013914) promoter-TSS (NM_013914) -10 NM_013914 30927 Mm.103673 NM_013914 ENSMUSG00000006587 Snai3 AI643946|Smuc|Zfp293 snail family zinc finger 3 protein-coding common_peak1_55_27_0.717289192161076_5.16599951813814_1.38733277998641 chr12 44269205 44269600 + 1.38733277998641 NA intron (NM_026164, intron 1 of 9) CpG 248 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding common_peak1_32_46_-0.787522867279879_5.1608274180377_1.38733277998641 chr9 56128921 56129361 + 1.38733277998641 NA TTS (NM_011193) TTS (NM_011193) 31929 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak1_55_27_0.717289192161076_5.16599951813814_1.38733277998641 chr2 152653151 152654099 + 1.38733277998641 NA Intergenic ID_B1|SINE|B4 -15836 NM_010376 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_55_27_0.717289192161076_5.16599951813814_1.38733277998641-2 chr3 21961797 21962301 + 1.38733277998641 NA Intergenic Intergenic -114603 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_32_46_-0.787522867279879_5.1608274180377_1.38733277998641-3 chr8 111720309 111720826 + 1.38733277998641 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 11569 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_32_46_-0.787522867279879_5.1608274180377_1.38733277998641-4 chr8 120004545 120005125 + 1.38733277998641 NA intron (NM_001310635, intron 1 of 14) intron (NM_001310635, intron 1 of 14) 12397 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak1_66_34_0.652270000695421_5.45541801729268_1.38722011998117-3 chr5 115531381 115532275 + 1.38722011998117 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 25152 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_40_55_-0.729340374883922_5.44268473461564_1.38722011998117 chr9 71803476 71804031 + 1.38722011998117 NA Intergenic Intergenic -32151 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_40_55_-0.729340374883922_5.44268473461564_1.38722011998117 chr16 45384344 45385225 + 1.38722011998117 NA intron (NM_001358443, intron 4 of 4) intron (NM_001358443, intron 4 of 4) 24269 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_66_34_0.652270000695421_5.45541801729268_1.38722011998117-2 chr5 91083445 91084715 + 1.38722011998117 NA intron (NM_007950, intron 1 of 4) intron (NM_007950, intron 1 of 4) 9463 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding common_peak2_40_55_-0.729340374883922_5.44268473461564_1.38722011998117-3 chr6 127453543 127453986 + 1.38722011998117 NA 5' UTR (NM_001346512, exon 1 of 6) 5' UTR (NM_001346512, exon 1 of 6) 137 NM_001346512 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding common_peak1_66_34_0.652270000695421_5.45541801729268_1.38722011998117-4 chr6 52225379 52226179 + 1.38722011998117 NA exon (NM_010456, exon 1 of 2) exon (NM_010456, exon 1 of 2) 1591 NM_010456 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding common_peak1_66_34_0.652270000695421_5.45541801729268_1.38722011998117 chr1 74029073 74029643 + 1.38722011998117 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 95089 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_40_55_-0.729340374883922_5.44268473461564_1.38722011998117-2 chr19 38931014 38931696 + 1.38722011998117 NA intron (NM_008234, intron 1 of 21) CpG 365 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak2_55_70_-0.625103005286002_5.83719561686168_1.38710580071366-2 chr7 126883752 126884583 + 1.38710580071366 NA 5' UTR (NM_001163775, exon 1 of 16) 5' UTR (NM_001163775, exon 1 of 16) 800 NM_001163775 381921 Mm.259634 NM_001163774 ENSMUSG00000059981 Taok2 1110033K02Rik|B230344N16|MAP3K17|PSK|PSK1|TAO1|TAO2|mKIAA0881 TAO kinase 2 protein-coding common_peak2_55_70_-0.625103005286002_5.83719561686168_1.38710580071366 chr4 135353530 135354136 + 1.38710580071366 NA promoter-TSS (NM_001130477) promoter-TSS (NM_001130477) -619 NM_001130477 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_85_46_0.584598698958551_5.84688820115691_1.38710580071366 chr8 77506106 77507169 + 1.38710580071366 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -10419 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_84_46_0.567843924839448_5.83851081409736_1.38710580071366-2 chr4 12170954 12171669 + 1.38710580071366 NA intron (NM_001310743, intron 1 of 7) intron (NM_001310743, intron 1 of 7) 704 NM_001310743 68099 Mm.25340 NM_026558 ENSMUSG00000028218 Fam92a 6720467C03Rik|Fam92a1 family with sequence similarity 92, member A protein-coding common_peak2_84_46_0.567843924839448_5.83851081409736_1.38710580071366 chr5 103757962 103758582 + 1.38710580071366 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 3699 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_84_46_0.567843924839448_5.83851081409736_1.38710580071366 chr3 97901283 97901678 + 1.38710580071366 NA intron (NM_011342, intron 1 of 4) CpG 253 NM_011342 20333 Mm.2551 NM_011342 ENSMUSG00000027879 Sec22b 4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1 SEC22 homolog B, vesicle trafficking protein protein-coding common_peak2_85_46_0.584598698958551_5.84688820115691_1.38710580071366-2 chr5 92220047 92220740 + 1.38710580071366 NA Intergenic Intergenic -4985 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak2_55_70_-0.625103005286002_5.83719561686168_1.38710580071366-3 chr9 88481772 88482473 + 1.38710580071366 NA 5' UTR (NM_019796, exon 1 of 12) 5' UTR (NM_019796, exon 1 of 12) 275 NM_001311113 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak1_85_46_0.584598698958551_5.84688820115691_1.38710580071366-2 chr9 44499004 44500222 + 1.38710580071366 NA intron (NM_030256, intron 2 of 8) intron (NM_030256, intron 2 of 8) 477 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_85_46_0.584598698958551_5.84688820115691_1.38710580071366 chr4 133910333 133910979 + 1.38710580071366 NA Intergenic CpG -22859 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_55_70_-0.625103005286002_5.83719561686168_1.38710580071366-4 chr9 102672716 102673419 + 1.38710580071366 NA Intergenic B1_Mur1|SINE|Alu -44737 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_98_55_0.533491684994365_6.07410076455479_1.38705231896991 chr7 19561670 19562274 + 1.38705231896991 NA exon (NM_199149, exon 1 of 13) exon (NM_199149, exon 1 of 13) 426 NM_199149 232947 Mm.219662 NM_199149 ENSMUSG00000051403 Ppp1r37 Gm158|Lrrc68 protein phosphatase 1, regulatory subunit 37 protein-coding common_peak1_66_81_-0.575998986977696_6.06955251112924_1.38705231896991 chr3 37640006 37640702 + 1.38705231896991 NA intron (NM_001305441, intron 1 of 1) CpG 407 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak2_85_99_-0.504668639138536_6.39152187020546_1.3869932493214 chr2 105016367 105017357 + 1.3869932493214 NA intron (NM_145380, intron 1 of 10) CpG 165 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding common_peak2_120_70_0.478563641471642_6.3890289402405_1.3869932493214 chr6 124931363 124932484 + 1.3869932493214 NA intron (NM_145385, intron 1 of 8) intron (NM_145385, intron 1 of 8) 535 NM_001170341 30853 Mm.29737 NM_145385 ENSMUSG00000030120 Mlf2 AI256856|AU018944|C77284 myeloid leukemia factor 2 protein-coding common_peak2_98_112_-0.479332355363219_6.58051278473358_1.38696358854294 chr3 122047630 122048841 + 1.38696358854294 NA intron (NM_007378, intron 1 of 49) intron (NM_007378, intron 1 of 49) 3775 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_120_133_-0.437778429481448_6.84719997571705_1.38692900879881 chr9 57427344 57428453 + 1.38692900879881 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 11838 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_325_216_0.2865367777067_7.90481962129783_1.38684301608101 chr19 38040976 38043803 + 1.38684301608101 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 1188 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_313_207_0.293922613310071_7.84740102479613_1.38590280573384 chr19 44741145 44742577 + 1.38590280573384 NA Intergenic Intergenic -15533 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_242_245_-0.315351429557415_7.78483879056053_1.38586569908157 chr9 58311402 58314028 + 1.38586569908157 NA exon (NM_010729, exon 1 of 7) exon (NM_010729, exon 1 of 7) 497 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_145_87_0.437928837355385_6.67839603731499_1.38482508992943 chr11 52332693 52333761 + 1.38482508992943 NA Intergenic Intergenic -27635 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_113_65_0.498549957840903_6.2936690982789_1.38423196907585 chr2 181496683 181498127 + 1.38423196907585 NA intron (NR_111899, intron 1 of 5) CpG 263 NM_001291204 66314 Mm.136648 NM_025482 ENSMUSG00000000827 Tpd52l2 2810411G23Rik|AU016537|C86069|D54 tumor protein D52-like 2 protein-coding common_peak2_105_60_0.50797773813373_6.18472620662975_1.38404115112578 chr19 7482565 7483194 + 1.38404115112578 NA intron (NM_001003934, intron 1 of 8) CpG 412 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak1_72_87_-0.555016183071371_6.18192352710161_1.38404115112576 chr6 128362077 128362956 + 1.38404115112576 NA promoter-TSS (NM_008021) promoter-TSS (NM_008021) 306 NM_001326586 72440 Mm.143908 NM_197981 ENSMUSG00000048668 Rhno1 2510047L19Rik|5930416I19Rik RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding common_peak2_78_42_0.591302911573178_5.72191621048869_1.38301369789 chr19 5567155 5567760 + 1.38301369789 NA promoter-TSS (NM_001033448) promoter-TSS (NM_001033448) -567 NM_001362046 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962|beta-5 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak1_78_42_0.591302911573178_5.72191621048869_1.38301369789 chr16 23448807 23449830 + 1.38301369789 NA Intergenic Intergenic 20185 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_78_42_0.591302911573178_5.72191621048869_1.38301369789-2 chr8 122904408 122905368 + 1.38301369789 NA intron (NR_037865, intron 4 of 13) intron (NR_037865, intron 4 of 13) 56514 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_72_38_0.619013216703678_5.59490882721409_1.38266584732704-4 chr3 40893525 40894007 + 1.38266584732704 NA promoter-TSS (NM_026622) promoter-TSS (NM_026622) -511 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding common_peak2_45_60_-0.687884035766632_5.58679531967957_1.38266584732704-3 chr3 32334537 32335674 + 1.38266584732704 NA 3' UTR (NM_009517, exon 6 of 6) 3' UTR (NM_009517, exon 6 of 6) -30384 NR_027966 67576 Mm.435324 NR_027966 4930429B21Rik - RIKEN cDNA 4930429B21 gene ncRNA common_peak2_45_60_-0.687884035766632_5.58679531967957_1.38266584732704-5 chr7 144026493 144027297 + 1.38266584732704 NA Intergenic Intergenic 17641 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_72_38_0.619013216703678_5.59490882721409_1.38266584732704 chr11 58016103 58017438 + 1.38266584732704 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 7706 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_45_60_-0.687884035766632_5.58679531967957_1.38266584732704-4 chr7 5038061 5038675 + 1.38266584732704 NA promoter-TSS (NM_001039532) promoter-TSS (NM_001039532) 78 NM_001039532 654801 Mm.333548 NM_001039532 ENSMUSG00000043290 Zfp784 C730049F21Rik|Znf784 zinc finger protein 784 protein-coding common_peak1_72_38_0.619013216703678_5.59490882721409_1.38266584732704-2 chr12 86891653 86892651 + 1.38266584732704 NA Intergenic CpG -7338 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_45_60_-0.687884035766632_5.58679531967957_1.38266584732704-2 chr2 180709400 180709954 + 1.38266584732704 NA promoter-TSS (NM_001289651) promoter-TSS (NM_001289651) 322 NM_177852 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak2_45_60_-0.687884035766632_5.58679531967957_1.38266584732704 chr12 112674366 112675256 + 1.38266584732704 NA promoter-TSS (NM_001165894) promoter-TSS (NM_001165894) 73 NM_001331107 11651 Mm.6645 NM_009652 ENSMUSG00000001729 Akt1 Akt|LTR-akt|PKB|PKB/Akt|PKBalpha|Rac thymoma viral proto-oncogene 1 protein-coding common_peak1_72_38_0.619013216703678_5.59490882721409_1.38266584732704-3 chr19 28963913 28964469 + 1.38266584732704 NA promoter-TSS (NM_198651) promoter-TSS (NM_198651) -37 NM_198651 381218 Mm.280653 NM_198651 ENSMUSG00000064202 4430402I18Rik AW122618|Spata6l RIKEN cDNA 4430402I18 gene protein-coding common_peak2_50_24_0.746810269789182_5.01726132466931_1.3806499615138 chr4 55532795 55533176 + 1.3806499615138 NA promoter-TSS (NM_010637) promoter-TSS (NM_010637) -510 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak2_28_42_-0.844296753751587_5.0041163778263_1.3806499615138-2 chr15 11770116 11770621 + 1.3806499615138 NA Intergenic Intergenic 135306 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_28_42_-0.844296753751587_5.0041163778263_1.3806499615138 chr12 103684227 103684969 + 1.3806499615138 NA Intergenic Intergenic -7836 NM_001310472 194604 NM_001310472 ENSMUSG00000071179 Serpina16 Gm46 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 protein-coding common_peak1_28_42_-0.844296753751587_5.0041163778263_1.3806499615138 chr12 79975416 79975946 + 1.3806499615138 NA Intergenic Intergenic -39417 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_50_24_0.746810269789182_5.01726132466931_1.3806499615138 chr19 37954966 37955538 + 1.3806499615138 NA intron (NM_001302140, intron 22 of 53) intron (NM_001302140, intron 22 of 53) 88325 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_182_190_-0.356492136078662_7.39918275999642_1.38043900937509 chr11 99229565 99231320 + 1.38043900937509 NA 5' UTR (NM_020618, exon 1 of 11) 5' UTR (NM_020618, exon 1 of 11) 575 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding unique_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-3 chr4 141664216 141664713 + 1.37991291380345 NA promoter-TSS (NM_001033150) promoter-TSS (NM_001033150) -349 NM_001033150 69582 Mm.33220 NM_001033150 ENSMUSG00000028917 Plekhm2 2310034J19Rik|AI854247|mKIAA0842 pleckstrin homology domain containing, family M (with RUN domain) member 2 protein-coding common_peak2_24_38_-0.916048377136697_4.8273780302939_1.37991291380345 chr12 35736753 35737290 + 1.37991291380345 NA Intergenic Intergenic -41903 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA common_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345-4 chr2 8734833 8735521 + 1.37991291380345 NA Intergenic Intergenic -454338 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345 chr1 36307775 36308111 + 1.37991291380345 NA intron (NM_001290727, intron 1 of 5) CpG 210 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak2_24_38_-0.916048377136697_4.8273780302939_1.37991291380345 chr13 15759413 15759940 + 1.37991291380345 NA Intergenic Intergenic 42954 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345 chr15 103359073 103359631 + 1.37991291380345 NA intron (NM_010577, intron 1 of 29) intron (NM_010577, intron 1 of 29) 7439 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-6 chr8 94270229 94270586 + 1.37991291380345 NA intron (NM_001357268, intron 1 of 20) intron (NM_001357268, intron 1 of 20) 1801 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-4 chr6 38873687 38874407 + 1.37991291380345 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 2143 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345-2 chr2 67565201 67565730 + 1.37991291380345 NA Intergenic Intergenic -109992 NR_106083 102465706 NR_106083 ENSMUSG00000098299 Mir7224 Gm27971|mmu-mir-7224 microRNA 7224 ncRNA common_peak2_45_21_0.783421683158958_4.85114246021678_1.37991291380345-2 chr3 155093623 155093890 + 1.37991291380345 NA promoter-TSS (NM_029330) promoter-TSS (NM_029330) 322 NM_028938 74435 Mm.195711 NM_028938 ENSMUSG00000028182 Lrriq3 4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|Lrrc44 leucine-rich repeats and IQ motif containing 3 protein-coding common_peak1_24_38_-0.916048377136697_4.8273780302939_1.37991291380345-2 chr4 156193666 156194040 + 1.37991291380345 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 3635 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345-3 chr12 41024300 41024960 + 1.37991291380345 NA 5' UTR (NM_053122, exon 2 of 7) 5' UTR (NM_053122, exon 2 of 7) 540 NM_053122 93757 Mm.363813 NM_053122 ENSMUSG00000056899 Immp2l AI853880|IMP2|Tg(HLA-A/H2-D)2Enge IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding common_peak1_24_38_-0.916048377136697_4.8273780302939_1.37991291380345 chr17 26618855 26619204 + 1.37991291380345 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) -57367 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_24_38_-0.916048377136697_4.8273780302939_1.37991291380345-3 chr8 27062361 27062728 + 1.37991291380345 NA Intergenic Intergenic 19989 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding unique_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345 chr15 77191986 77192532 + 1.37991291380345 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) -38414 NM_001358771 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345-5 chr3 159841459 159842133 + 1.37991291380345 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 2146 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak2_24_38_-0.916048377136697_4.8273780302939_1.37991291380345-4 chr6 113327037 113327588 + 1.37991291380345 NA non-coding (NR_149720, exon 1 of 7) non-coding (NR_149720, exon 1 of 7) 336 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-5 chr5 64160829 64161704 + 1.37991291380345 NA intron (NM_019636, intron 1 of 19) intron (NM_019636, intron 1 of 19) 1006 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-3 chr2 154743265 154743848 + 1.37991291380345 NA Intergenic Intergenic -47554 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding unique_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345-3 chr3 121660878 121661591 + 1.37991291380345 NA Intergenic Intergenic -9529 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-2 chr16 91556992 91557460 + 1.37991291380345 NA intron (NM_008338, intron 2 of 6) intron (NM_008338, intron 2 of 6) 10132 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345 chr15 85041577 85042271 + 1.37991291380345 NA promoter-TSS (NM_001356616) promoter-TSS (NM_001356616) -818 NM_001356616 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak2_24_38_-0.916048377136697_4.8273780302939_1.37991291380345-3 chr5 31192395 31192991 + 1.37991291380345 NA promoter-TSS (NM_153680) promoter-TSS (NM_153680) 446 NM_001127355 13667 Mm.29394 NM_010122 ENSMUSG00000029145 Eif2b4 Eif2b eukaryotic translation initiation factor 2B, subunit 4 delta protein-coding unique_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-2 chr19 28664223 28664742 + 1.37991291380345 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -13742 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_45_21_0.783421683158958_4.85114246021678_1.37991291380345-4 chr4 107802298 107802799 + 1.37991291380345 NA intron (NM_001080926, intron 1 of 18) CpG 289 NM_001080926 16975 Mm.442134 NM_053073 ENSMUSG00000028613 Lrp8 4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding common_peak2_24_38_-0.916048377136697_4.8273780302939_1.37991291380345-2 chr4 40143538 40143987 + 1.37991291380345 NA intron (NM_007386, intron 1 of 20) CpG 497 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding common_peak2_25_38_-0.859864044407136_4.85547019665868_1.37991291380345-2 chr1 162453153 162453629 + 1.37991291380345 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 24643 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak2_45_21_0.783421683158958_4.85114246021678_1.37991291380345-3 chr9 56509429 56509834 + 1.37991291380345 NA Intergenic L2|LINE|L2 91012 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_45_21_0.783421683158958_4.85114246021678_1.37991291380345 chr3 137918631 137919015 + 1.37991291380345 NA intron (NM_019920, intron 1 of 6) intron (NM_019920, intron 1 of 6) 268 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding common_peak2_92_106_-0.49018184462091_6.49637606409069_1.37975132463071 chrX 18162697 18164018 + 1.37975132463071 NA intron (NM_001310444, intron 1 of 28) CpG 782 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak1_202_127_0.369517091378152_7.18475854568908_1.37791946330932 chr15 79440843 79442576 + 1.37791946330932 NA 5' UTR (NM_001289899, exon 1 of 9) 5' UTR (NM_001289899, exon 1 of 9) 109 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_121_134_-0.436714507321199_6.85845834339023_1.37758132794631 chr15 103240013 103241151 + 1.37758132794631 NA promoter-TSS (NM_001076789) promoter-TSS (NM_001076789) 128 NR_002883 434858 Mm.391346 NR_002883 Gm5643 EG434858 heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo common_peak1_61_76_-0.596337001142119_5.96861804012384_1.37667887791799 chr16 18288406 18289147 + 1.37667887791799 NA intron (NM_033324, intron 1 of 13) CpG 392 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DGCR8, microprocessor complex subunit protein-coding common_peak2_92_51_0.550845423639145_5.97586242996066_1.37667887791798 chr19 55569874 55570416 + 1.37667887791798 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 132059 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_92_51_0.550845423639145_5.97586242996066_1.37667887791798 chr8 90795977 90797389 + 1.37667887791798 NA Intergenic Intergenic -32152 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_223_142_0.350662818293803_7.33520274592529_1.37610279952918 chr9 108490738 108492083 + 1.37610279952918 NA TTS (NM_008483) TTS (NM_008483) 734 NM_001168373 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627 chr11 88558808 88559212 + 1.3750876294627 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -60241 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-13 chr9 57973579 57973818 + 1.3750876294627 NA Intergenic Intergenic -24326 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding common_peak2_28_11_0.997005500229355_4.08346525083583_1.3750876294627 chr15 93596155 93596439 + 1.3750876294627 NA promoter-TSS (NM_001033217) promoter-TSS (NM_001033217) -406 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-12 chr19 58525183 58525625 + 1.3750876294627 NA intron (NM_029372, intron 3 of 8) intron (NM_029372, intron 3 of 8) 13402 NM_029372 75645 Mm.159542 NM_029372 ENSMUSG00000025090 Ccdc172 1700011F14Rik coiled-coil domain containing 172 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-3 chr13 94382100 94382598 + 1.3750876294627 NA intron (NM_009680, intron 1 of 26) intron (NM_009680, intron 1 of 26) 23389 NM_009680 11774 Mm.21185 NM_009680 ENSMUSG00000021686 Ap3b1 AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2 adaptor-related protein complex 3, beta 1 subunit protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-7 chr14 57299677 57300314 + 1.3750876294627 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 98488 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-15 chr3 93023137 93023560 + 1.3750876294627 NA Intergenic MLT1D|LTR|ERVL-MaLR -4287 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-11 chr18 68257365 68257624 + 1.3750876294627 NA Intergenic Intergenic 3479 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-9 chr18 24710380 24710744 + 1.3750876294627 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 1939 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-6 chr14 29403495 29404004 + 1.3750876294627 NA intron (NM_009785, intron 4 of 37) intron (NM_009785, intron 4 of 37) 318115 NM_009785 12294 Mm.386754 NM_009785 ENSMUSG00000021991 Cacna2d3 Cacnad3|alapha2delta3 calcium channel, voltage-dependent, alpha2/delta subunit 3 protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-5 chr14 33352246 33352787 + 1.3750876294627 NA intron (NM_153800, intron 5 of 10) intron (NM_153800, intron 5 of 10) 58508 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-2 chr11 117975267 117975866 + 1.3750876294627 NA Intergenic Intergenic -6200 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-14 chr2 173661768 173662523 + 1.3750876294627 NA intron (NM_024436, intron 2 of 6) B3A|SINE|B2 2300 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-10 chr18 36450246 36450649 + 1.3750876294627 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 4048 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627 chr1 64928505 64928786 + 1.3750876294627 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 28179 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-7 chr15 95837946 95838265 + 1.3750876294627 NA intron (NM_001253813, intron 2 of 20) intron (NM_001253813, intron 2 of 20) -8033 NR_155276 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627 chr11 78985045 78985462 + 1.3750876294627 NA promoter-TSS (NM_001159301) promoter-TSS (NM_001159301) -329 NM_010708 16859 Mm.341434 NM_010708 ENSMUSG00000001123 Lgals9 AA407335|AI194909|AI265545|LGALS35|Lgals5|gal-9|galectin-9 lectin, galactose binding, soluble 9 protein-coding common_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-2 chr19 40995706 40995911 + 1.3750876294627 NA Intergenic Intergenic -1273 NM_008528 17060 Mm.9749 NM_008528 ENSMUSG00000061132 Blnk BASH|Bca|Ly-57|Ly57|Lyw-57|SLP-65 B cell linker protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-25 chr8 94987136 94987436 + 1.3750876294627 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 2887 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-10 chr6 54992395 54992642 + 1.3750876294627 NA intron (NM_026637, intron 1 of 3) intron (NM_026637, intron 1 of 3) 349 NM_026637 110175 Mm.294708 NM_026637 ENSMUSG00000002797 Ggct A030007L17Rik|AA673177|Gctg|Ggc gamma-glutamyl cyclotransferase protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-17 chr4 127236207 127236581 + 1.3750876294627 NA 3' UTR (NM_001302081, exon 12 of 12) 3' UTR (NM_001302081, exon 12 of 12) -7390 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-8 chr15 77054853 77055466 + 1.3750876294627 NA intron (NM_028010, intron 4 of 4) MLT1A0|LTR|ERVL-MaLR -4491 NM_013593 17189 Mm.404074 NM_013593 ENSMUSG00000018893 Mb AI325109 myoglobin protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-21 chr6 42471152 42471770 + 1.3750876294627 NA exon (NM_146987, exon 1 of 1) exon (NM_146987, exon 1 of 1) 715 NM_146987 258989 Mm.377778 NM_146987 ENSMUSG00000091983 Olfr457 MOR257-1 olfactory receptor 457 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-2 chr10 99251117 99251455 + 1.3750876294627 NA Intergenic Intergenic -11945 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-8 chr7 133119852 133120516 + 1.3750876294627 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 3299 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-24 chr7 141341134 141341726 + 1.3750876294627 NA intron (NM_133191, intron 1 of 20) intron (NM_133191, intron 1 of 20) 2428 NM_133191 98845 Mm.27451 NM_133191 ENSMUSG00000025504 Eps8l2 AI042819|AW545405|Eps8r2 EPS8-like 2 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-16 chr4 89056932 89057154 + 1.3750876294627 NA intron (NR_033533, intron 1 of 2) intron (NR_033533, intron 1 of 2) 6736 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-4 chr13 114683711 114684166 + 1.3750876294627 NA intron (NR_045976, intron 4 of 6) intron (NR_045976, intron 4 of 6) 76710 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-20 chr5 134433869 134434420 + 1.3750876294627 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 22118 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-4 chr17 67354712 67355056 + 1.3750876294627 NA promoter-TSS (NM_008984) promoter-TSS (NM_008984) -393 NM_001357625 19274 Mm.311809 NM_008984 ENSMUSG00000033278 Ptprm RPTPmu|mKIAA4044 protein tyrosine phosphatase, receptor type, M protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-12 chr9 35340266 35340787 + 1.3750876294627 NA Intergenic Intergenic 59421 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-9 chr3 107792346 107792550 + 1.3750876294627 NA Intergenic Intergenic -31979 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-27 chr9 71802366 71802985 + 1.3750876294627 NA Intergenic Intergenic -31073 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-23 chr7 67467077 67467527 + 1.3750876294627 NA Intergenic Intergenic -94444 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-19 chr5 123975732 123976144 + 1.3750876294627 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 2310 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-6 chr15 87655044 87655443 + 1.3750876294627 NA intron (NM_134096, intron 1 of 3) intron (NM_134096, intron 1 of 3) 30013 NM_134096 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-5 chr18 32239495 32239874 + 1.3750876294627 NA promoter-TSS (NM_133658) promoter-TSS (NM_133658) -647 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-4 chr13 18744545 18744917 + 1.3750876294627 NA intron (NM_172120, intron 3 of 28) intron (NM_172120, intron 3 of 28) 27439 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-26 chr8 117261577 117261891 + 1.3750876294627 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 4715 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-22 chr7 66586957 66587356 + 1.3750876294627 NA Intergenic Intergenic 102405 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-5 chr13 117142966 117143278 + 1.3750876294627 NA Intergenic Intergenic 13097 NR_046023 623312 Mm.131279 NR_046023 ENSMUSG00000114792 Gm6416 - predicted gene 6416 ncRNA unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-18 chr5 23387489 23387908 + 1.3750876294627 NA Intergenic Intergenic 46655 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-6 chr6 92462956 92463304 + 1.3750876294627 NA intron (NM_001081146, intron 2 of 8) intron (NM_001081146, intron 2 of 8) 18262 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-11 chr8 128669170 128669720 + 1.3750876294627 NA Intergenic Intergenic -16209 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-3 chr11 115841566 115841993 + 1.3750876294627 NA intron (NM_001252532, intron 2 of 25) intron (NM_001252532, intron 2 of 25) 17721 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-3 chr13 99390777 99391198 + 1.3750876294627 NA intron (NM_173757, intron 4 of 10) AT_rich|Low_complexity|Low_complexity 21839 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-13 chr2 20347460 20348067 + 1.3750876294627 NA intron (NM_001081006, intron 2 of 21) intron (NM_001081006, intron 2 of 21) 57850 NM_001081006 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-2 chr12 16811457 16811972 + 1.3750876294627 NA intron (NM_033270, intron 1 of 6) intron (NM_033270, intron 1 of 6) 749 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-14 chr9 59659717 59659998 + 1.3750876294627 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 3489 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding unique_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-8 chr17 15375203 15375783 + 1.3750876294627 NA 5' UTR (NM_007865, exon 1 of 11) 5' UTR (NM_007865, exon 1 of 11) 330 NM_007865 13388 Mm.4875 NM_007865 ENSMUSG00000014773 Dll1 Delta1 delta like canonical Notch ligand 1 protein-coding common_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627-7 chr7 109547197 109547675 + 1.3750876294627 NA intron (NM_001001326, intron 4 of 19) MER20|DNA|hAT-Charlie 27304 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_12_24_-1.21126303574637_4.03822467190154_1.3750876294627-3 chr6 38381193 38381509 + 1.3750876294627 NA promoter-TSS (NM_153600) promoter-TSS (NM_153600) -173 NM_153600 264134 Mm.253446 NM_153600 ENSMUSG00000056832 Ttc26 9330141E21Rik|9430097H08Rik|Ift56|hop|hpy tetratricopeptide repeat domain 26 protein-coding unique_peak1_28_11_0.997005500229355_4.08346525083583_1.3750876294627 chr10 91240056 91240397 + 1.3750876294627 NA Intergenic Intergenic -19607 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_107_120_-0.45337136594768_6.69217755430075_1.37432009644747 chr11 103114937 103115977 + 1.37432009644747 NA promoter-TSS (NM_138753) promoter-TSS (NM_138753) -868 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding common_peak1_106_120_-0.466697200245436_6.68551463715188_1.37432009644747 chr11 86683172 86684556 + 1.37432009644747 NA promoter-TSS (NM_175004) promoter-TSS (NM_175004) -119 NM_175004 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding common_peak2_107_120_-0.45337136594768_6.69217755430075_1.37432009644747-4 chr7 35801864 35802971 + 1.37432009644747 NA promoter-TSS (NR_033567) promoter-TSS (NR_033567) -175 NR_033567 78547 Mm.406883 NR_033567 ENSMUSG00000044997 E130304I02Rik - RIKEN cDNA E130304I02 gene ncRNA common_peak2_107_120_-0.45337136594768_6.69217755430075_1.37432009644747-3 chr5 147860090 147861162 + 1.37432009644747 NA promoter-TSS (NM_025624) promoter-TSS (NM_025624) -2 NM_025624 66537 Mm.332855 NM_025624 ENSMUSG00000029649 Pomp 2510048O06Rik|Ump1 proteasome maturation protein protein-coding common_peak1_146_88_0.431405335053867_6.69143609849333_1.37432009644747 chr8 24573338 24574592 + 1.37432009644747 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 2368 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak2_107_120_-0.45337136594768_6.69217755430075_1.37432009644747-2 chr17 84111970 84113032 + 1.37432009644747 NA Intergenic Intergenic 33841 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_121_71_0.47017608828732_6.40501304558597_1.3741671362008-2 chr8 105344772 105345687 + 1.3741671362008 NA intron (NM_177699, intron 1 of 21) intron (NM_177699, intron 1 of 21) 2741 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak1_121_71_0.47017608828732_6.40501304558597_1.3741671362008 chr15 10484798 10485888 + 1.3741671362008 NA promoter-TSS (NM_011232) promoter-TSS (NM_011232) 594 NM_026396 67832 Mm.28057 NM_026396 ENSMUSG00000022247 Brix1 1110064N10Rik|Bxdc2|C76935 BRX1, biogenesis of ribosomes protein-coding common_peak1_121_71_0.47017608828732_6.40501304558597_1.3741671362008-2 chr9 9238404 9239467 + 1.3741671362008 NA promoter-TSS (NM_027823) promoter-TSS (NM_027823) 78 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding common_peak2_121_71_0.47017608828732_6.40501304558597_1.3741671362008 chr12 85960141 85960919 + 1.3741671362008 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 118511 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_86_100_-0.502462859147074_6.40698005317826_1.37416713620078 chr11 70669052 70669992 + 1.37416713620078 NA promoter-TSS (NM_172561) promoter-TSS (NM_172561) -106 NM_001167669 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-17 chr8 77502567 77503048 + 1.37307999835977 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -14249 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-3 chr9 29342840 29343082 + 1.37307999835977 NA intron (NM_001357601, intron 1 of 7) intron (NM_001357601, intron 1 of 7) 69724 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-6 chr2 33357599 33357920 + 1.37307999835977 NA intron (NM_001290570, intron 1 of 16) intron (NM_001290570, intron 1 of 16) 13735 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-11 chr4 46560173 46560559 + 1.37307999835977 NA intron (NM_001164804, intron 2 of 11) intron (NM_001164804, intron 2 of 11) 6074 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-4 chr16 37778752 37779084 + 1.37307999835977 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 1863 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-5 chr15 93596263 93596488 + 1.37307999835977 NA promoter-TSS (NM_001033217) promoter-TSS (NM_001033217) -484 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-24 chr6 142040946 142041407 + 1.37307999835977 NA Intergenic Intergenic -32431 NM_001081318 625716 Mm.295865 NM_001081318 ENSMUSG00000079263 Gm6614 EG625716 predicted gene 6614 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-17 chr18 75463151 75463513 + 1.37307999835977 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -51313 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-3 chr10 39981578 39981836 + 1.37307999835977 NA intron (NM_001113385, intron 1 of 3) intron (NM_001113385, intron 1 of 3) 4939 NM_001113385 215928 Mm.31744 NM_001001489 ENSMUSG00000038528 Mfsd4b5 Naglt1c major facilitator superfamily domain containing 4B5 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-4 chr14 7854088 7854421 + 1.37307999835977 NA intron (NM_001081427, intron 1 of 45) MIRb|SINE|MIR 36297 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977 chr1 43818204 43818566 + 1.37307999835977 NA intron (NM_026430, intron 1 of 14) intron (NM_026430, intron 1 of 14) 9323 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-6 chr2 118540210 118540480 + 1.37307999835977 NA intron (NM_001331221, intron 3 of 3) intron (NM_001331221, intron 3 of 3) 4242 NR_138603 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-2 chr11 100736131 100736557 + 1.37307999835977 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 1871 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-6 chr11 118221868 118222204 + 1.37307999835977 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -9294 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-23 chr5 36795169 36795686 + 1.37307999835977 NA 3' UTR (NM_026242, exon 2 of 2) 3' UTR (NM_026242, exon 2 of 2) 1327 NM_026242 67568 Mm.332336 NM_026242 ENSMUSG00000055302 Mrfap1 9130413I22Rik|AL022827|Pam14 Morf4 family associated protein 1 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-9 chr3 7501465 7501819 + 1.37307999835977 NA Intergenic Intergenic -1784 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding common_peak2_24_9_1.04742574683819_3.84564096830646_1.37307999835977-2 chr13 43019348 43019604 + 1.37307999835977 NA intron (NM_001005740, intron 2 of 12) intron (NM_001005740, intron 2 of 12) -103363 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-29 chr8 33796912 33797157 + 1.37307999835977 NA intron (NM_001286168, intron 5 of 7) intron (NM_001286168, intron 5 of 7) -49264 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-6 chr2 27470764 27471224 + 1.37307999835977 NA intron (NM_001113573, intron 1 of 11) intron (NM_001113573, intron 1 of 11) 4404 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-7 chr5 117284720 117285096 + 1.37307999835977 NA intron (NM_018858, intron 3 of 3) intron (NM_018858, intron 3 of 3) 2656 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-15 chr7 133085136 133085472 + 1.37307999835977 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -3444 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-3 chr16 32661960 32662363 + 1.37307999835977 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 6036 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977 chr10 96690744 96691086 + 1.37307999835977 NA Intergenic Intergenic 73914 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-12 chrX 10216353 10216645 + 1.37307999835977 NA promoter-TSS (NM_001177952) promoter-TSS (NM_001177952) -46 NM_001177952 19893 Mm.247556 NM_011285 ENSMUSG00000031174 Rpgr Rd9|Rp3h retinitis pigmentosa GTPase regulator protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-32 chr9 50006942 50007237 + 1.37307999835977 NA Intergenic Intergenic -207696 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-15 chr18 60752136 60752503 + 1.37307999835977 NA Intergenic Intergenic -3654 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-22 chr4 118246577 118246999 + 1.37307999835977 NA intron (NM_011213, intron 7 of 32) intron (NM_011213, intron 7 of 32) -36224 NR_106085 102466820 NR_106085 ENSMUSG00000098596 Mir7226 Gm27630|mmu-mir-7226 microRNA 7226 ncRNA unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-4 chr18 50054464 50054679 + 1.37307999835977 NA promoter-TSS (NR_155293) promoter-TSS (NR_155293) -909 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-13 chr18 8542226 8542719 + 1.37307999835977 NA Intergenic Intergenic -670384 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-8 chr8 124926992 124927377 + 1.37307999835977 NA intron (NM_053207, intron 1 of 4) intron (NM_053207, intron 1 of 4) 22070 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-9 chr5 29887152 29887482 + 1.37307999835977 NA Intergenic Intergenic -125797 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-18 chr8 80837496 80837876 + 1.37307999835977 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 42793 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-9 chr15 10872701 10873198 + 1.37307999835977 NA Intergenic Intergenic 43898 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-21 chr3 87164890 87165191 + 1.37307999835977 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 9707 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-2 chr17 79702024 79702468 + 1.37307999835977 NA Intergenic Intergenic 12795 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-28 chr7 139282029 139282320 + 1.37307999835977 NA Intergenic Intergenic 33692 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-4 chr3 153672358 153672630 + 1.37307999835977 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 52639 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-12 chr17 70836559 70836804 + 1.37307999835977 NA Intergenic Intergenic 10096 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977 chr15 77834384 77834756 + 1.37307999835977 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 7605 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977 chr14 57293712 57294042 + 1.37307999835977 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 104606 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-4 chr11 72499404 72499804 + 1.37307999835977 NA intron (NM_029932, intron 10 of 11) intron (NM_029932, intron 10 of 11) -9684 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-20 chr3 3760185 3760764 + 1.37307999835977 NA Intergenic Intergenic 252444 NM_013920 30942 Mm.330897 NM_013920 ENSMUSG00000017688 Hnf4g NR2A2 hepatocyte nuclear factor 4, gamma protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-11 chr6 115037444 115037820 + 1.37307999835977 NA intron (NM_026894, intron 1 of 7) CpG 242 NM_026894 68971 Mm.24937 NM_026894 ENSMUSG00000030316 Tamm41 1500001M20Rik|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-5 chr19 42613082 42613445 + 1.37307999835977 NA promoter-TSS (NM_053083) promoter-TSS (NM_053083) -457 NM_053083 67573 Mm.178767 NM_053083 ENSMUSG00000025185 Loxl4 4833426I20Rik|Loxc lysyl oxidase-like 4 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-27 chr7 121706521 121706837 + 1.37307999835977 NA exon (NM_001033173, exon 1 of 16) exon (NM_001033173, exon 1 of 16) 574 NM_001033173 76179 Mm.122538 NM_001033173 ENSMUSG00000063317 Usp31 6330567E21Rik|mKIAA1203 ubiquitin specific peptidase 31 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-30 chr8 36169591 36169817 + 1.37307999835977 NA Intergenic Intergenic 13694 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-8 chr14 67009216 67009654 + 1.37307999835977 NA promoter-TSS (NM_009761) promoter-TSS (NM_009761) -558 NM_009761 12177 Mm.29820 NM_009761 ENSMUSG00000022051 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-10 chr3 30508328 30508790 + 1.37307999835977 NA intron (NM_001361034, intron 1 of 16) CpG 1116 NM_001361034 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-8 chr2 156278040 156278457 + 1.37307999835977 NA intron (NM_172674, intron 9 of 17) intron (NM_172674, intron 9 of 17) -34225 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-10 chr15 36874051 36874308 + 1.37307999835977 NA Intergenic Intergenic -77250 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-5 chr8 123499178 123499431 + 1.37307999835977 NA intron (NR_028260, intron 13 of 15) intron (NR_028260, intron 13 of 15) 16151 NM_001170975 72185 Mm.27925 NM_028146 ENSMUSG00000031970 Dbndd1 2810427I04Rik|D8Ertd590e dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-2 chr1 159889814 159890393 + 1.37307999835977 NA intron (NM_022312, intron 14 of 22) intron (NM_022312, intron 14 of 22) -154277 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-7 chr2 117474548 117474864 + 1.37307999835977 NA Intergenic Intergenic -131829 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-11 chr15 103129146 103129576 + 1.37307999835977 NA intron (NR_045743, intron 3 of 6) intron (NR_045743, intron 3 of 6) 17467 NR_045743 432989 Mm.383979 NR_045743 ENSMUSG00000097003 D930007P13Rik - Riken cDNA D930007P13 gene ncRNA unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-3 chr14 60597140 60597453 + 1.37307999835977 NA Intergenic Intergenic -37409 NM_001033272 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-16 chr8 26157764 26157984 + 1.37307999835977 NA promoter-TSS (NM_199042) promoter-TSS (NM_199042) -295 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-7 chr14 52244027 52244466 + 1.37307999835977 NA Intergenic Intergenic -6674 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-7 chr2 137094223 137094563 + 1.37307999835977 NA intron (NM_013822, intron 8 of 25) intron (NM_013822, intron 8 of 25) 22127 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-14 chr7 67970851 67971112 + 1.37307999835977 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 18724 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-18 chr19 3375858 3376224 + 1.37307999835977 NA intron (NM_013495, intron 13 of 18) intron (NM_013495, intron 13 of 18) -12816 NM_001039658 17771 Mm.209941 NM_010841 ENSMUSG00000024905 Tesmin Mtl5 testis expressed metallothionein like protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-14 chr18 39700992 39701250 + 1.37307999835977 NA Intergenic Intergenic -72376 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-26 chr7 110786178 110786367 + 1.37307999835977 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 13668 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-31 chr8 118286870 118287095 + 1.37307999835977 NA intron (NM_019707, intron 1 of 13) intron (NM_019707, intron 1 of 13) 3371 NM_019707 12554 Mm.334841 NM_019707 ENSMUSG00000031841 Cdh13 4932416G01Rik|Cdht|Tcad cadherin 13 protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-8 chr5 17574720 17575088 + 1.37307999835977 NA promoter-TSS (NM_013657) promoter-TSS (NM_013657) 88 NM_013657 20348 Mm.5071 NM_013657 ENSMUSG00000028780 Sema3c 1110036B02Rik|SemE|Semae sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-13 chr7 65370309 65370668 + 1.37307999835977 NA intron (NM_009386, intron 1 of 27) CpG 756 NM_001163574 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-2 chr15 97706067 97706285 + 1.37307999835977 NA promoter-TSS (NM_028003) promoter-TSS (NM_028003) -354 NM_028003 71919 Mm.12255 NM_028003 ENSMUSG00000022466 Rpap3 2310042P20Rik|D15Ertd682e RNA polymerase II associated protein 3 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-3 chr11 115374477 115374774 + 1.37307999835977 NA Intergenic Intergenic -6869 NM_001346774 217310 Mm.205707 NM_175454 ENSMUSG00000034586 Hid1 C630004H02Rik HID1 domain containing protein-coding common_peak2_25_9_1.10361007956775_3.87373313467124_1.37307999835977 chr14 105894830 105895066 + 1.37307999835977 NA intron (NM_011897, intron 1 of 1) intron (NM_011897, intron 1 of 1) 1871 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty RTK signaling antagonist 2 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-19 chr2 25175474 25175880 + 1.37307999835977 NA Intergenic Intergenic -5081 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_24_9_1.04742574683819_3.84564096830646_1.37307999835977 chr11 20741912 20742132 + 1.37307999835977 NA promoter-TSS (NM_001290545) promoter-TSS (NM_001290545) -466 NM_181411 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-12 chr5 140829846 140830155 + 1.37307999835977 NA exon (NM_010302, exon 1 of 4) exon (NM_010302, exon 1 of 4) 431 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-5 chr11 113102566 113102923 + 1.37307999835977 NA intron (NR_015556, intron 1 of 2) intron (NR_015556, intron 1 of 2) 99094 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-3 chr2 137687117 137687500 + 1.37307999835977 NA Intergenic Intergenic -569276 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-2 chr11 35961350 35961788 + 1.37307999835977 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 18520 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977 chr1 134910145 134910423 + 1.37307999835977 NA intron (NM_001081307, intron 1 of 23) intron (NM_001081307, intron 1 of 23) 45656 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-5 chr18 57204175 57204445 + 1.37307999835977 NA intron (NM_001001979, intron 4 of 24) intron (NM_001001979, intron 4 of 24) 71220 NM_001001979 70417 Mm.297863 NM_001001979 ENSMUSG00000024593 Megf10 3000002B06Rik|Gm331 multiple EGF-like-domains 10 protein-coding common_peak2_24_9_1.04742574683819_3.84564096830646_1.37307999835977-3 chr14 120477177 120477397 + 1.37307999835977 NA Intergenic Intergenic -1174 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977 chr11 70459290 70459680 + 1.37307999835977 NA promoter-TSS (NM_001348337) promoter-TSS (NM_001348337) 52 NM_001029929 574428 Mm.425692 NM_001029929 ENSMUSG00000040829 Zmynd15 - zinc finger, MYND-type containing 15 protein-coding unique_peak2_10_21_-1.26614625689375_3.82635849019042_1.37307999835977-10 chr5 142425176 142425498 + 1.37307999835977 NA intron (NM_199068, intron 1 of 8) intron (NM_199068, intron 1 of 8) 23840 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding unique_peak1_25_9_1.10361007956775_3.87373313467124_1.37307999835977-2 chr11 117314848 117315143 + 1.37307999835977 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -16720 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-25 chr7 63886892 63887206 + 1.37307999835977 NA 3' UTR (NM_021366, exon 2 of 2) 3' UTR (NM_021366, exon 2 of 2) -29808 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_24_9_1.04742574683819_3.84564096830646_1.37307999835977-16 chr18 62018503 62018915 + 1.37307999835977 NA Intergenic Intergenic 65634 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak2_130_142_-0.417809028335999_6.95096682261039_1.37287060386843 chr6 51468739 51469814 + 1.37287060386843 NA intron (NM_016806, intron 1 of 10) CpG 618 NR_104468 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-7 chr8 69938030 69939058 + 1.37104523450288 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) 35839 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_37_51_-0.731276263595944_5.33480158634312_1.37104523450288 chr7 127421427 127422017 + 1.37104523450288 NA intron (NM_026999, intron 1 of 2) intron (NM_026999, intron 1 of 2) 312 NM_026999 69234 Mm.20301 NM_026999 ENSMUSG00000045251 Zfp688 2810407K09Rik|AI326029 zinc finger protein 688 protein-coding common_peak2_36_51_-0.76947897708365_5.31570022959927_1.37104523450288 chr10 71145673 71146679 + 1.37104523450288 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 13514 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288 chr1 43160191 43161082 + 1.37104523450288 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 3325 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-2 chr1 82586116 82586859 + 1.37104523450288 NA promoter-TSS (NM_007734) promoter-TSS (NM_007734) 362 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-8 chr9 96752912 96753251 + 1.37104523450288 NA promoter-TSS (NR_015511) promoter-TSS (NR_015511) -250 NR_015511 319859 Mm.259909 NM_177020 E030011O05Rik - RIKEN cDNA E030011O05 gene ncRNA common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-3 chr1 134080225 134080996 + 1.37104523450288 NA Intergenic Intergenic -1455 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-5 chr11 106998484 106999411 + 1.37104523450288 NA intron (NM_010655, intron 1 of 10) intron (NM_010655, intron 1 of 10) 578 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-4 chr10 30600255 30601125 + 1.37104523450288 NA promoter-TSS (NM_028604) promoter-TSS (NM_028604) 10 NM_028604 73681 Mm.294503 NM_028604 ENSMUSG00000019792 Trmt11 2410075D05Rik|3110045I18Rik|AW213713 tRNA methyltransferase 11 protein-coding common_peak2_37_51_-0.731276263595944_5.33480158634312_1.37104523450288-6 chr7 5014865 5015329 + 1.37104523450288 NA promoter-TSS (NM_025324) promoter-TSS (NM_025324) -369 NM_001110328 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding common_peak1_61_31_0.670449539552782_5.33522476977639_1.37104523450287 chr18 75598263 75598867 + 1.37104523450287 NA intron (NM_201354, intron 6 of 11) intron (NM_201354, intron 6 of 11) 83920 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_61_31_0.670449539552782_5.33522476977639_1.37104523450287-4 chr8 44800786 44801501 + 1.37104523450287 NA Intergenic Intergenic -149065 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_61_31_0.670449539552782_5.33522476977639_1.37104523450287 chr11 60107854 60108570 + 1.37104523450287 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 3199 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_61_31_0.670449539552782_5.33522476977639_1.37104523450287-5 chr8 119422122 119422689 + 1.37104523450287 NA Intergenic Intergenic -14757 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak1_61_31_0.670449539552782_5.33522476977639_1.37104523450287-2 chr4 107488765 107489688 + 1.37104523450287 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 54507 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_61_31_0.670449539552782_5.33522476977639_1.37104523450287 chr10 96751479 96752345 + 1.37104523450287 NA Intergenic Intergenic 134911 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_61_31_0.670449539552782_5.33522476977639_1.37104523450287-2 chr6 37429752 37430481 + 1.37104523450287 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 12032 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_61_31_0.670449539552782_5.33522476977639_1.37104523450287-3 chr7 45619982 45620779 + 1.37104523450287 NA 3' UTR (NM_008051, exon 2 of 2) 3' UTR (NM_008051, exon 2 of 2) -1431 NM_001018013 73456 Mm.380445 NM_001018013 ENSMUSG00000064158 Izumo1 1700058F15Rik|Izumo izumo sperm-egg fusion 1 protein-coding common_peak2_80_94_-0.516473155203334_6.31161903072928_1.37055006108808-2 chr8 117328603 117329819 + 1.37055006108808 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -19959 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_80_94_-0.516473155203334_6.31161903072928_1.37055006108808 chr8 70635436 70636566 + 1.37055006108808 NA Intergenic Intergenic -3545 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_114_66_0.489366030519117_6.31077220571733_1.37055006108805-3 chr3 98338559 98339548 + 1.37055006108805 NA intron (NM_016966, intron 1 of 11) intron (NM_016966, intron 1 of 11) 916 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak1_114_66_0.489366030519117_6.31077220571733_1.37055006108805-2 chr3 32397162 32398134 + 1.37055006108805 NA Intergenic CpG -31983 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_114_66_0.489366030519117_6.31077220571733_1.37055006108805 chr13 23684190 23685827 + 1.37055006108805 NA TTS (NM_001290380) TTS (NM_001290380) 809 NM_023422 68024 Mm.261676 NM_023422 ENSMUSG00000018102 Hist1h2bc 2610022J01Rik|H2bfs|R74621 histone cluster 1, H2bc protein-coding common_peak1_106_61_0.497969726642284_6.20318117370802_1.36934044104001 chr13 45907684 45908856 + 1.36934044104001 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 56721 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_107_61_0.51129556094004_6.20984409085689_1.36934044104001-4 chr9 63398364 63399896 + 1.36934044104001 NA exon (NM_027090, exon 1 of 2) exon (NM_027090, exon 1 of 2) 114 NM_027090 69478 Mm.113942 NM_027090 ENSMUSG00000032403 2300009A05Rik - RIKEN cDNA 2300009A05 gene protein-coding common_peak1_107_61_0.51129556094004_6.20984409085689_1.36934044104001-2 chr6 114920120 114921659 + 1.36934044104001 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 932 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_107_61_0.51129556094004_6.20984409085689_1.36934044104001 chr5 3543832 3544607 + 1.36934044104001 NA intron (NM_001042501, intron 1 of 10) intron (NM_001042501, intron 1 of 10) 386 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_107_61_0.51129556094004_6.20984409085689_1.36934044104001-3 chr9 14276437 14277726 + 1.36934044104001 NA intron (NM_030261, intron 1 of 9) intron (NM_030261, intron 1 of 9) 780 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_86_47_0.570786122883565_5.87035556216294_1.368434703924-2 chr19 3324978 3325528 + 1.368434703924 NA intron (NM_013495, intron 1 of 18) CpG 1952 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak2_56_71_-0.619925944669711_5.85996202910746_1.368434703924-3 chr3 37747233 37748085 + 1.368434703924 NA Intergenic Intergenic -23299 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_56_71_-0.619925944669711_5.85996202910746_1.368434703924 chr19 40894792 40895431 + 1.368434703924 NA TTS (NR_106167) TTS (NR_106167) 406 NM_028319 72672 Mm.313523 NM_028319 ENSMUSG00000049164 Zfp518a 2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335 zinc finger protein 518A protein-coding common_peak2_56_71_-0.619925944669711_5.85996202910746_1.368434703924 chr1 16228123 16228964 + 1.368434703924 NA TTS (NM_025303) TTS (NM_025303) 122661 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_56_71_-0.619925944669711_5.85996202910746_1.368434703924-2 chr12 30584208 30585038 + 1.368434703924 NA intron (NM_172049, intron 1 of 4) CpG 180 NM_172049 211986 Mm.34035 NM_172049 ENSMUSG00000043061 Tmem18 BC024093 transmembrane protein 18 protein-coding common_peak1_86_47_0.570786122883565_5.87035556216294_1.368434703924 chr11 70189614 70190674 + 1.368434703924 NA Intergenic Intergenic 23521 NM_010796 17312 Mm.252405 NM_010796 ENSMUSG00000000318 Clec10a CD301a|M-ASGP-BP-1|Mgl|Mgl1 C-type lectin domain family 10, member A protein-coding unique_peak1_86_47_0.570786122883565_5.87035556216294_1.368434703924 chr4 119108784 119110184 + 1.368434703924 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 739 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_86_47_0.570786122883565_5.87035556216294_1.368434703924 chr19 16868959 16869518 + 1.368434703924 NA Intergenic Intergenic 4592 NM_008023 14240 Mm.7971 NM_008023 ENSMUSG00000056829 Foxb2 Fkh4 forkhead box B2 protein-coding common_peak1_258_259_-0.30385798154337_7.87043882225677_1.36737169280526 chr8 126616008 126617854 + 1.36737169280526 NA Intergenic Intergenic -23495 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_156_95_0.41645481030325_6.79318990587278_1.36535318635962 chr15 102624175 102625487 + 1.36535318635962 NA intron (NM_001310067, intron 1 of 11) intron (NM_001310067, intron 1 of 11) 633 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000099083 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak1_204_129_0.361193673752618_7.20296464990476_1.36328554900616 chr12 8810195 8812029 + 1.36328554900616 NA Intergenic Intergenic 39716 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak2_157_167_-0.381804736076728_7.2014150547404_1.36328554900611 chr8 25274577 25275880 + 1.36328554900611 NA Intergenic Intergenic 31042 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak2_225_144_0.343358632072072_7.35158840605097_1.36292613148975 chr3 65527612 65529593 + 1.36292613148975 NA non-coding (NR_027955, exon 2 of 2) non-coding (NR_027955, exon 2 of 2) 155 NM_178892 99929 Mm.246398 NM_178892 ENSMUSG00000034640 Tiparp ARTD14|AW558171|PARP7 TCDD-inducible poly(ADP-ribose) polymerase protein-coding common_peak1_176_184_-0.358199752539423_7.3522815842466_1.3629261314897 chr6 34596265 34598195 + 1.3629261314897 NA Intergenic Intergenic -1274 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_42_56_-0.686647483955309_5.48956627218709_1.36290396447365-2 chr4 132921602 132922440 + 1.36290396447365 NA intron (NM_145553, intron 1 of 8) intron (NM_145553, intron 1 of 8) 530 NM_145553 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak2_42_56_-0.686647483955309_5.48956627218709_1.36290396447365 chr10 111576344 111577007 + 1.36290396447365 NA Intergenic Intergenic 17598 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_41_56_-0.720355318145361_5.47271235509206_1.36290396447365 chr5 32141064 32142014 + 1.36290396447365 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 5067 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_42_56_-0.686647483955309_5.48956627218709_1.36290396447365-3 chr7 80260987 80261682 + 1.36290396447365 NA TTS (NM_177765) TTS (NM_177765) 119 NM_031375 83485 Mm.21175 NM_031375 ENSMUSG00000047084 Ngrn AW552001 neugrin, neurite outgrowth associated protein-coding common_peak1_41_56_-0.720355318145361_5.47271235509206_1.36290396447365 chr19 16250435 16250987 + 1.36290396447365 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 64293 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_42_56_-0.686647483955309_5.48956627218709_1.36290396447365-4 chr8 95000984 95001705 + 1.36290396447365 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) -16348 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak1_67_35_0.632850876320895_5.48635043960276_1.36290396447364-2 chr17 14340408 14341060 + 1.36290396447364 NA intron (NM_022315, intron 4 of 12) intron (NM_022315, intron 4 of 12) 58208 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA common_peak2_67_35_0.632850876320895_5.48635043960276_1.36290396447364 chr3 56183111 56183718 + 1.36290396447364 NA 5' UTR (NM_030595, exon 1 of 58) 5' UTR (NM_030595, exon 1 of 58) 287 NM_030595 26422 Mm.384353 NM_030595 ENSMUSG00000027799 Nbea Lyst2|mKIAA1544 neurobeachin protein-coding common_peak1_67_35_0.632850876320895_5.48635043960276_1.36290396447364 chr1 120033014 120033881 + 1.36290396447364 NA intron (NM_001012322, intron 4 of 13) intron (NM_001012322, intron 4 of 13) 26467 NM_001012322 319229 Mm.189223 NM_001012322 ENSMUSG00000026387 Sctr 6530402O03Rik secretin receptor protein-coding common_peak1_67_35_0.632850876320895_5.48635043960276_1.36290396447364-3 chr7 110797886 110798522 + 1.36290396447364 NA intron (NM_009667, intron 6 of 14) intron (NM_009667, intron 6 of 14) 25600 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_51_66_-0.647605995575903_5.74228619266982_1.36285458319551-3 chr6 134089532 134090155 + 1.36285458319551 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 54143 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak2_51_66_-0.647605995575903_5.74228619266982_1.36285458319551-5 chr9 67049384 67050021 + 1.36285458319551 NA promoter-TSS (NM_001164249) promoter-TSS (NM_001164249) -489 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_51_66_-0.647605995575903_5.74228619266982_1.36285458319551-2 chr6 83506208 83506947 + 1.36285458319551 NA intron (NR_149734, intron 1 of 6) intron (NR_149734, intron 1 of 6) 392 NM_013764 27369 Mm.42234 NM_013764 ENSMUSG00000014554 Dguok dGK|dGK1|dGK2|dGK3 deoxyguanosine kinase protein-coding common_peak2_51_66_-0.647605995575903_5.74228619266982_1.36285458319551 chr17 14978172 14978768 + 1.36285458319551 NA promoter-TSS (NM_001123370) promoter-TSS (NM_001123370) 342 NM_001360662 100041639 Mm.440445 NM_001123367 ENSMUSG00000079710 Gm3448 - predicted gene 3448 protein-coding common_peak2_51_66_-0.647605995575903_5.74228619266982_1.36285458319551-4 chr7 30728816 30729828 + 1.36285458319551 NA TTS (NM_001290631) TTS (NM_001290631) 212 NM_027215 69804 Mm.27499 NM_027215 ENSMUSG00000006315 Tmem147 2010004E11Rik|5033425B17Rik|Nifie14 transmembrane protein 147 protein-coding common_peak1_79_43_0.576155365187889_5.74750930123124_1.3628545831955-2 chr8 26887416 26888097 + 1.3628545831955 NA Intergenic Intergenic -63333 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_79_43_0.576155365187889_5.74750930123124_1.3628545831955 chr7 63936825 63937638 + 1.3628545831955 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 1684 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_79_43_0.576155365187889_5.74750930123124_1.3628545831955-3 chr9 57130176 57131164 + 1.3628545831955 NA promoter-TSS (NM_028636) promoter-TSS (NM_028636) -107 NM_028636 73744 Mm.30110 NM_028636 ENSMUSG00000032295 Man2c1 1110025H24Rik mannosidase, alpha, class 2C, member 1 protein-coding common_peak2_79_43_0.576155365187889_5.74750930123124_1.3628545831955 chr17 83275614 83276645 + 1.3628545831955 NA Intergenic Intergenic 60846 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding common_peak1_87_101_-0.50030491894768_6.42227288249765_1.36164189934938 chr19 10782162 10782729 + 1.36164189934938 NA non-coding (NR_027805, exon 2 of 4) non-coding (NR_027805, exon 2 of 4) 41498 NR_027805 403202 Mm.34482 NM_207529 ENSMUSG00000067577 A430093F15Rik Gm674 RIKEN cDNA A430093F15 gene ncRNA common_peak1_122_72_0.461970610947875_6.42080986435396_1.36164189934935 chr3 87905863 87907520 + 1.36164189934935 NA promoter-TSS (NM_001331052) promoter-TSS (NM_001331052) -159 NM_001331051 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak1_122_72_0.461970610947875_6.42080986435396_1.36164189934935-2 chr8 86882744 86883523 + 1.36164189934935 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 2125 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_73_39_0.601977666596835_5.62291692818578_1.36066917175235-3 chr5 72913614 72914150 + 1.36066917175235 NA promoter-TSS (NM_001113423) promoter-TSS (NM_001113423) -480 NM_001113423 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak2_46_61_-0.680535007084821_5.61392880684446_1.36066917175235-3 chr4 89123166 89123876 + 1.36066917175235 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 4705 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA unique_peak1_73_39_0.601977666596835_5.62291692818578_1.36066917175235 chr9 102728834 102729997 + 1.36066917175235 NA exon (NM_019764, exon 7 of 10) exon (NM_019764, exon 7 of 10) -10233 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_73_39_0.601977666596835_5.62291692818578_1.36066917175235-2 chr3 84442330 84442985 + 1.36066917175235 NA 3' UTR (NM_001205355, exon 12 of 12) 3' UTR (NM_001205355, exon 12 of 12) 36834 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding common_peak2_46_61_-0.680535007084821_5.61392880684446_1.36066917175235-2 chr19 40517918 40518565 + 1.36066917175235 NA Intergenic Intergenic -4429 NM_009166 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_73_39_0.601977666596835_5.62291692818578_1.36066917175235-4 chrX 150478024 150478592 + 1.36066917175235 NA Intergenic Intergenic -19158 NR_152724 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak1_73_39_0.601977666596835_5.62291692818578_1.36066917175235 chr18 57354837 57355539 + 1.36066917175235 NA intron (NM_028447, intron 1 of 8) CpG 455 NM_028447 73137 Mm.29889 NM_028447 ENSMUSG00000024594 Prrc1 1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik proline-rich coiled-coil 1 protein-coding common_peak2_46_61_-0.680535007084821_5.61392880684446_1.36066917175235 chr13 51099936 51100691 + 1.36066917175235 NA promoter-TSS (NM_001283030) promoter-TSS (NM_001283030) 414 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-12 chr10 19436572 19436766 + 1.36011389749466 NA Intergenic Intergenic -50046 NR_152784 102635880 Mm.331974 NR_152784 ENSMUSG00000110902 Gm33104 - predicted gene, 33104 ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-29 chr13 112988077 112988310 + 1.36011389749466 NA exon (NM_001081062, exon 1 of 3) exon (NM_001081062, exon 1 of 3) 391 NM_001081062 218630 Mm.25457 NM_001081062 ENSMUSG00000042417 Ccno C86987|Ccnu|E130318K11|UDG2|Ung2 cyclin O protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-14 chr16 45950376 45950657 + 1.36011389749466 NA intron (NR_152227, intron 2 of 2) intron (NR_152227, intron 2 of 2) 4910 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-22 chr3 145002170 145002421 + 1.36011389749466 NA Intergenic Intergenic -27250 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-30 chr7 63662779 63663032 + 1.36011389749466 NA intron (NM_130880, intron 4 of 13) intron (NM_130880, intron 4 of 13) 218133 NM_130880 170711 Mm.156872 NM_130880 ENSMUSG00000033510 Otud7a AJ430384|Otud7 OTU domain containing 7A protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-50 chr4 119686064 119686278 + 1.36011389749466 NA Intergenic Intergenic -27226 NM_008191 14916 Mm.278 NM_008191 ENSMUSG00000032978 Guca2b AV066530|Gcap2|Ugn guanylate cyclase activator 2b (retina) protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-32 chr15 90279924 90280192 + 1.36011389749466 NA Intergenic Intergenic 55698 NR_106106 102466838 NR_106106 ENSMUSG00000099319 Mir7648 Gm27736|mmu-mir-7648 microRNA 7648 ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-3 chr10 77557483 77557712 + 1.36011389749466 NA intron (NM_008404, intron 10 of 15) intron (NM_008404, intron 10 of 15) -24058 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-69 chr9 32672307 32672567 + 1.36011389749466 NA Intergenic Intergenic -23605 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-7 chr1 136415906 136416115 + 1.36011389749466 NA promoter-TSS (NR_024328) promoter-TSS (NR_024328) -491 NR_024328 320054 Mm.208000 NR_024328 ENSMUSG00000097403 9230116N13Rik - RIKEN cDNA 9230116N13 gene ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-17 chr19 44145154 44145460 + 1.36011389749466 NA intron (NM_028607, intron 2 of 4) RSINE1|SINE|B4 1139 NM_028607 73689 Mm.124685 NM_028607 ENSMUSG00000057506 Bloc1s2 2410089B13Rik|BLOS2|Bloc1s2a biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-43 chr2 112443140 112443418 + 1.36011389749466 NA Intergenic B3|SINE|B2 -11746 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-41 chr18 80643524 80643802 + 1.36011389749466 NA intron (NM_198429, intron 8 of 9) intron (NM_198429, intron 8 of 9) 64510 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-34 chr9 35326666 35326879 + 1.36011389749466 NA Intergenic Intergenic 45667 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-16 chr17 64108213 64108414 + 1.36011389749466 NA intron (NM_001037997, intron 16 of 18) intron (NM_001037997, intron 16 of 18) -57641 NR_130982 68771 Mm.443351 NR_130982 1110058D11Rik - RIKEN cDNA 1110058D11 gene ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-2 chr1 39913616 39913851 + 1.36011389749466 NA intron (NM_001252202, intron 2 of 29) intron (NM_001252202, intron 2 of 29) 12820 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-21 chr12 12983971 12984163 + 1.36011389749466 NA Intergenic Intergenic -42231 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-72 chr9 63602158 63602368 + 1.36011389749466 NA promoter-TSS (NM_001357323) promoter-TSS (NM_001357323) 230 NM_030068 78250 Mm.444612 NM_030068 ENSMUSG00000037801 Iqch 4921504K03Rik IQ motif containing H protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466 chr1 19973769 19973968 + 1.36011389749466 NA Intergenic Intergenic -382586 NR_045734 75028 Mm.417820 NR_045734 ENSMUSG00000089914 4930486I03Rik - RIKEN cDNA 4930486I03 gene ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-3 chr1 64538676 64538877 + 1.36011389749466 NA intron (NM_001037726, intron 1 of 6) intron (NM_001037726, intron 1 of 6) 5972 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-4 chr11 28207787 28208049 + 1.36011389749466 NA Intergenic Intergenic 376406 NM_001166661 216613 Mm.93759 NM_181577 ENSMUSG00000032878 Ccdc85a - coiled-coil domain containing 85A protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-48 chr4 58417182 58417412 + 1.36011389749466 NA Intergenic Intergenic 23801 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-15 chr11 32356628 32356836 + 1.36011389749466 NA intron (NM_177364, intron 1 of 12) intron (NM_177364, intron 1 of 12) 8921 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-25 chr5 3516657 3516918 + 1.36011389749466 NA intron (NM_009873, intron 6 of 7) intron (NM_009873, intron 6 of 7) -27046 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-68 chr8 84259094 84259283 + 1.36011389749466 NA exon (NM_026350, exon 9 of 10) exon (NM_026350, exon 9 of 10) -1864 NM_026423 67873 Mm.278085 NM_026423 ENSMUSG00000004996 Mri1 2410018C20Rik methylthioribose-1-phosphate isomerase 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-22 chr12 71884168 71884364 + 1.36011389749466 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) -5277 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-49 chr4 100517300 100517503 + 1.36011389749466 NA intron (NM_001033773, intron 6 of 9) intron (NM_001033773, intron 6 of 9) 38534 NM_001033773 381534 Mm.318133 NM_001033773 ENSMUSG00000069733 Ube2u - ubiquitin-conjugating enzyme E2U (putative) protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-7 chr12 18610681 18610953 + 1.36011389749466 NA Intergenic Intergenic 96307 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-27 chr13 91935536 91935742 + 1.36011389749466 NA intron (NM_009027, intron 5 of 14) intron (NM_009027, intron 5 of 14) 52403 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-55 chr5 92848585 92848789 + 1.36011389749466 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 39305 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-23 chr4 32288575 32288822 + 1.36011389749466 NA Intergenic Intergenic -128737 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-38 chr18 14997038 14997377 + 1.36011389749466 NA intron (NR_045372, intron 3 of 4) intron (NR_045372, intron 3 of 4) 8212 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-32 chr7 134289260 134289461 + 1.36011389749466 NA intron (NM_001081331, intron 5 of 7) intron (NM_001081331, intron 5 of 7) -64263 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-37 chr17 84193214 84193436 + 1.36011389749466 NA exon (NM_183021, exon 37 of 38) exon (NM_183021, exon 37 of 38) -5378 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-46 chr3 151318686 151318879 + 1.36011389749466 NA Intergenic Intergenic -119100 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-6 chr1 135148086 135148341 + 1.36011389749466 NA intron (NM_026823, intron 1 of 6) intron (NM_026823, intron 1 of 6) 1379 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-30 chr14 64666458 64666760 + 1.36011389749466 NA intron (NM_001081177, intron 1 of 39) intron (NM_001081177, intron 1 of 39) 14078 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-15 chr17 6139911 6140155 + 1.36011389749466 NA intron (NM_054040, intron 1 of 13) B1_Mus1|SINE|Alu 1885 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-67 chr8 13974449 13974683 + 1.36011389749466 NA exon (NM_173744, exon 1 of 3) exon (NM_173744, exon 1 of 3) 211 NM_173744 72148 Mm.5727 NM_173744 ENSMUSG00000050052 Tdrp 2610019F03Rik testis development related protein protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-20 chr3 96980007 96980243 + 1.36011389749466 NA Intergenic Intergenic -52277 NM_001271628 14613 Mm.281816 NM_008121 ENSMUSG00000057123 Gja5 5730555N10Rik|Cnx40|Cx40|Gja-5 gap junction protein, alpha 5 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-45 chr3 66220980 66221175 + 1.36011389749466 NA intron (NM_008987, intron 2 of 2) intron (NM_008987, intron 2 of 2) 1190 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-61 chr6 146970907 146971170 + 1.36011389749466 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -16617 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-70 chr9 47432641 47432844 + 1.36011389749466 NA Intergenic Intergenic -97428 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-35 chr9 96862009 96862254 + 1.36011389749466 NA intron (NM_001289645, intron 1 of 6) intron (NM_001289645, intron 1 of 6) 27343 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-39 chr18 39828461 39828672 + 1.36011389749466 NA Intergenic Intergenic 55069 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-28 chr13 98689758 98690009 + 1.36011389749466 NA intron (NM_001025606, intron 2 of 3) intron (NM_001025606, intron 2 of 3) 4948 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-18 chr11 101001478 101001677 + 1.36011389749466 NA Intergenic Intergenic -7875 NM_016920 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-66 chr7 128314462 128314674 + 1.36011389749466 NA Intergenic Intergenic -16437 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-65 chr7 112316679 112316947 + 1.36011389749466 NA intron (NM_001193305, intron 8 of 25) intron (NM_001193305, intron 8 of 25) -51495 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-5 chr1 119494822 119495013 + 1.36011389749466 NA intron (NM_022327, intron 1 of 4) intron (NM_022327, intron 1 of 4) 9865 NM_022327 64143 Mm.27832 NM_022327 ENSMUSG00000004451 Ralb 5730472O18Rik v-ral simian leukemia viral oncogene B protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-17 chr11 99438345 99438551 + 1.36011389749466 NA promoter-TSS (NM_023256) promoter-TSS (NM_023256) -295 NM_023256 66809 Mm.28042 NM_023256 ENSMUSG00000035775 Krt20 9030623C06Rik|Ck-20|Ck20|K20|Krt21 keratin 20 protein-coding common_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466 chr1 184139271 184139521 + 1.36011389749466 NA Intergenic RSINE1|SINE|B4 105015 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-62 chr7 44815010 44815225 + 1.36011389749466 NA promoter-TSS (NM_053074) promoter-TSS (NM_053074) 541 NM_030693 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-2 chr1 180314147 180314400 + 1.36011389749466 NA Intergenic Intergenic -16203 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-40 chr18 61958338 61958604 + 1.36011389749466 NA intron (NM_172628, intron 1 of 16) intron (NM_172628, intron 1 of 16) 5396 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-3 chr3 31024414 31024616 + 1.36011389749466 NA intron (NM_008857, intron 2 of 17) B1F|SINE|Alu -14451 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-58 chr5 151067422 151067633 + 1.36011389749466 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 114920 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-57 chr5 113161685 113161929 + 1.36011389749466 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 1506 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466 chr1 16225870 16226189 + 1.36011389749466 NA Intergenic Intergenic 120147 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-29 chr7 3302468 3302714 + 1.36011389749466 NA promoter-TSS (NM_011102) promoter-TSS (NM_011102) -941 NM_001291434 18752 Mm.7980 NM_011102 ENSMUSG00000078816 Prkcg PKCgamma|Pkcc|Prkcc protein kinase C, gamma protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-5 chr11 106325465 106325673 + 1.36011389749466 NA intron (NM_133199, intron 18 of 23) intron (NM_133199, intron 18 of 23) -11007 NM_001313939 15985 Mm.2987 NM_008339 ENSMUSG00000040592 Cd79b B29|Ig-beta|Igb|Igbeta CD79B antigen protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-4 chr1 71867338 71867599 + 1.36011389749466 NA Intergenic Intergenic -20644 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-47 chr4 54966086 54966354 + 1.36011389749466 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 18275 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-20 chr11 115944951 115945172 + 1.36011389749466 NA intron (NM_020483, intron 3 of 10) intron (NM_020483, intron 3 of 10) 11402 NM_020483 57230 Mm.267810 NM_020483 ENSMUSG00000020755 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-16 chr11 76154516 76154753 + 1.36011389749466 NA intron (NM_026664, intron 4 of 21) B1F|SINE|Alu 24996 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-25 chr13 32907576 32907840 + 1.36011389749466 NA Intergenic Intergenic -9568 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-10 chr14 76615821 76616029 + 1.36011389749466 NA Intergenic Intergenic -59036 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-8 chr12 30003126 30003382 + 1.36011389749466 NA exon (NM_181395, exon 17 of 23) exon (NM_181395, exon 17 of 23) 65218 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-71 chr9 49999973 50000180 + 1.36011389749466 NA Intergenic Intergenic -200683 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-35 chr17 27047031 27047229 + 1.36011389749466 NA Intergenic Intergenic -10174 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-13 chr16 24728164 24728402 + 1.36011389749466 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 6428 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-53 chr4 145273725 145273933 + 1.36011389749466 NA intron (NM_009401, intron 12 of 12) intron (NM_009401, intron 12 of 12) -26959 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-21 chr3 121341222 121341492 + 1.36011389749466 NA intron (NR_155539, intron 2 of 2) intron (NR_155539, intron 2 of 2) 49617 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-6 chr11 116436751 116436991 + 1.36011389749466 NA intron (NM_176902, intron 2 of 2) intron (NM_176902, intron 2 of 2) 2658 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-11 chr10 4338829 4339119 + 1.36011389749466 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 48501 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-26 chr13 63303981 63304251 + 1.36011389749466 NA TTS (NM_001042673) TTS (NM_001042673) -2833 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-24 chr4 32305683 32305940 + 1.36011389749466 NA Intergenic ORR1D2|LTR|ERVL-MaLR -111624 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-36 chr17 66842813 66843046 + 1.36011389749466 NA intron (NM_001357625, intron 15 of 32) intron (NM_001357625, intron 15 of 32) 128473 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-64 chr7 112153124 112153410 + 1.36011389749466 NA intron (NM_001360257, intron 2 of 7) intron (NM_001360257, intron 2 of 7) 5429 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-12 chr16 24430795 24431039 + 1.36011389749466 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -17174 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-28 chr6 28682799 28683053 + 1.36011389749466 NA intron (NM_019776, intron 12 of 23) intron (NM_019776, intron 12 of 23) 148821 NM_138682 192198 Mm.443660 NM_138682 ENSMUSG00000049939 Lrrc4 MBAG1|NGL-2|NGL2|NLG-2|Nag14 leucine rich repeat containing 4 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-33 chr16 18339406 18339651 + 1.36011389749466 NA intron (NM_001359110, intron 1 of 9) intron (NM_001359110, intron 1 of 9) 4382 NM_001359109 27883 Mm.265990 NM_138583 ENSMUSG00000013539 Tango2 D16H22S680E|T10 transport and golgi organization 2 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-9 chr14 75842269 75842495 + 1.36011389749466 NA TTS (NR_045294) TTS (NR_045294) 2582 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-33 chr7 144060611 144060851 + 1.36011389749466 NA Intergenic B1_Mur3|SINE|Alu 51477 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-44 chr3 55116248 55116437 + 1.36011389749466 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 4176 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-2 chr6 128349193 128349444 + 1.36011389749466 NA intron (NM_011657, intron 1 of 10) RSINE1|SINE|B4 6533 NM_011657 22158 Mm.291783 NM_011657 ENSMUSG00000001521 Tulp3 2310022L06Rik|AI316887 tubby-like protein 3 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-19 chr11 108367289 108367491 + 1.36011389749466 NA Intergenic Intergenic -23502 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-73 chr9 67572890 67573133 + 1.36011389749466 NA Intergenic Intergenic -13308 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-60 chr6 143168561 143168784 + 1.36011389749466 NA intron (NM_029250, intron 1 of 7) intron (NM_029250, intron 1 of 7) 1442 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-52 chr4 140664111 140664366 + 1.36011389749466 NA intron (NM_001290803, intron 1 of 28) intron (NM_001290803, intron 1 of 28) 1649 NM_001290803 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-10 chr1 189875055 189875276 + 1.36011389749466 NA 3' UTR (NM_008976, exon 19 of 19) 3' UTR (NM_008976, exon 19 of 19) 47126 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-19 chr2 148180712 148180931 + 1.36011389749466 NA Intergenic Intergenic -133852 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-63 chr7 90042999 90043209 + 1.36011389749466 NA intron (NR_110364, intron 5 of 5) intron (NR_110364, intron 5 of 5) 13945 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15|Gm26529|Gm32094 RIKEN cDNA E230029C05 gene ncRNA unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-14 chr10 86181712 86182007 + 1.36011389749466 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 86005 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466 chr10 108386063 108386319 + 1.36011389749466 NA intron (NM_054056, intron 3 of 6) intron (NM_054056, intron 3 of 6) 54002 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-59 chr6 34642036 34642244 + 1.36011389749466 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 43636 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-56 chr5 106920232 106920429 + 1.36011389749466 NA intron (NM_177873, intron 3 of 39) intron (NM_177873, intron 3 of 39) 5560 NM_177873 330149 Mm.121664 NM_177873 ENSMUSG00000043410 Hfm1 A330009G12Rik|Gm1046|Mer3|Sec63d1 HFM1, ATP-dependent DNA helicase homolog protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-23 chr12 76397422 76397689 + 1.36011389749466 NA Intergenic Intergenic -6621 NM_001002012 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-9 chr1 187226673 187226977 + 1.36011389749466 NA intron (NM_001357646, intron 2 of 7) intron (NM_001357646, intron 2 of 7) 11082 NM_001357645 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-13 chr10 28003570 28003797 + 1.36011389749466 NA Intergenic Intergenic -71137 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-27 chr5 149212815 149213028 + 1.36011389749466 NA intron (NM_001359957, intron 9 of 10) intron (NM_001359957, intron 9 of 10) 28361 NM_001359957 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-2 chr13 13955319 13955527 + 1.36011389749466 NA intron (NM_001362405, intron 1 of 12) intron (NM_001362405, intron 1 of 12) 749 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-42 chr2 26917979 26918222 + 1.36011389749466 NA intron (NM_013678, intron 3 of 5) intron (NM_013678, intron 3 of 5) -1570 NM_013677 20930 Mm.347512 NM_013677 ENSMUSG00000015790 Surf1 0610010F23Rik|Surf-1 surfeit gene 1 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-26 chr5 118381233 118381440 + 1.36011389749466 NA Intergenic Intergenic 136109 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-11 chr15 11639882 11640084 + 1.36011389749466 NA Intergenic Intergenic -240325 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-51 chr4 128961285 128961488 + 1.36011389749466 NA exon (NM_172875, exon 3 of 11) exon (NM_172875, exon 3 of 11) 1069 NM_172875 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-54 chr5 3152488 3152707 + 1.36011389749466 NA Intergenic Intergenic -191296 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-8 chr1 161400847 161401037 + 1.36011389749466 NA intron (NM_009452, intron 1 of 2) intron (NM_009452, intron 1 of 2) 5504 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-31 chr7 130947730 130948004 + 1.36011389749466 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 11664 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-24 chr12 95734652 95734900 + 1.36011389749466 NA intron (NM_201518, intron 1 of 1) intron (NM_201518, intron 1 of 1) 42550 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-34 chr17 5571865 5572190 + 1.36011389749466 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 79427 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak2_4_9_-1.2581211927692_2.69286749850276_1.36011389749466-18 chr2 25267769 25268040 + 1.36011389749466 NA intron (NM_175286, intron 1 of 3) intron (NM_175286, intron 1 of 3) 4514 NM_023464 68475 Mm.21444 NM_023464 ENSMUSG00000026966 Ssna1 1110003H09Rik|1190004J23Rik|AA934184|N14|NA14 SS nuclear autoantigen 1 protein-coding unique_peak1_10_4_0.871357266856187_2.75760672831546_1.36011389749466-31 chr14 117122131 117122343 + 1.36011389749466 NA intron (NM_011821, intron 1 of 8) intron (NM_011821, intron 1 of 8) 196940 NM_011821 23888 Mm.440025 NM_011821 ENSMUSG00000058571 Gpc6 - glypican 6 protein-coding common_peak1_93_52_0.538685869165612_5.997263389146_1.35978651500509 chr11 98774247 98775206 + 1.35978651500509 NA exon (NM_145434, exon 1 of 8) exon (NM_145434, exon 1 of 8) 651 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak1_93_52_0.538685869165612_5.997263389146_1.35978651500509-2 chr19 9107150 9107940 + 1.35978651500509 NA Intergenic Intergenic -19589 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_93_52_0.538685869165612_5.997263389146_1.35978651500509-3 chr9 78175746 78176536 + 1.35978651500509 NA intron (NR_040401, intron 1 of 3) intron (NR_040401, intron 1 of 3) 227 NR_040401 320295 Mm.131285 NR_040401 ENSMUSG00000097574 C920006O11Rik - RIKEN cDNA C920006O11 gene ncRNA common_peak1_361_350_-0.257187609819677_8.32673341539472_1.35977928731959 chr8 72135326 72137453 + 1.35977928731959 NA intron (NM_001001491, intron 1 of 7) intron (NM_001001491, intron 1 of 7) 1097 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_167_176_-0.369180813210106_7.28301514347794_1.35898822216985 chr16 23317542 23318623 + 1.35898822216985 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 27612 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_167_176_-0.369180813210106_7.28301514347794_1.35898822216985 chr6 42348208 42349702 + 1.35898822216985 NA promoter-TSS (NM_011777) promoter-TSS (NM_011777) -873 NM_001289619 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-2 chr18 64477362 64477848 + 1.35897270024963 NA intron (NM_007998, intron 3 of 10) B4|SINE|B4 11493 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-4 chr4 133057249 133057682 + 1.35897270024963 NA intron (NM_146155, intron 3 of 6) intron (NM_146155, intron 3 of 6) 45959 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-3 chr3 103102733 103103063 + 1.35897270024963 NA Intergenic CpG -24658 NM_177857 329727 Mm.293641 NM_177857 ENSMUSG00000007379 Dennd2c A930010I20Rik DENN/MADD domain containing 2C protein-coding unique_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-2 chr10 67644523 67645132 + 1.35897270024963 NA Intergenic Intergenic -72868 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-4 chr9 110333376 110333772 + 1.35897270024963 NA intron (NM_001001144, intron 1 of 22) CpG 218 NM_001001144 235623 Mm.288741 NM_001001144 ENSMUSG00000032485 Scap 9530044G19|mKIAA0199 SREBF chaperone protein-coding unique_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963 chr1 36325572 36325989 + 1.35897270024963 NA Intergenic Intergenic 18047 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963 chr12 112938207 112938680 + 1.35897270024963 NA exon (NM_025399, exon 4 of 5) exon (NM_025399, exon 4 of 5) 3699 NM_025399 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding unique_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-5 chr7 28168480 28168987 + 1.35897270024963 NA Intergenic Intergenic -1015 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding unique_peak2_18_31_-1.02378156588161_4.4881092170592_1.35897270024963-3 chr2 164513906 164514295 + 1.35897270024963 NA Intergenic Intergenic 16575 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding unique_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-3 chr17 22817237 22817710 + 1.35897270024962 NA intron (NR_030709, intron 1 of 4) intron (NR_030709, intron 1 of 4) 274 NR_030709 100042679 Mm.484007 NR_030709 Gm16386 EG545191|Gm21017 zinc finger protein 946 pseudogene pseudo unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-7 chr8 4314216 4314583 + 1.35897270024962 NA intron (NM_010485, intron 1 of 5) intron (NM_010485, intron 1 of 5) 10701 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-2 chr13 27733978 27734380 + 1.35897270024962 NA Intergenic Intergenic -17442 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-2 chr13 15665026 15665628 + 1.35897270024962 NA intron (NM_008130, intron 10 of 14) intron (NM_008130, intron 10 of 14) 137303 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-3 chr15 83571183 83571515 + 1.35897270024962 NA intron (NM_009775, intron 1 of 3) intron (NM_009775, intron 1 of 3) 7776 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-5 chr2 91202228 91202614 + 1.35897270024962 NA promoter-TSS (NM_007387) promoter-TSS (NM_007387) -491 NM_001357067 11432 Mm.45570 NM_007387 ENSMUSG00000002103 Acp2 Acp-2|LAP acid phosphatase 2, lysosomal protein-coding common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-7 chr8 67729423 67729743 + 1.35897270024962 NA intron (NM_177698, intron 11 of 14) (CAAAA)n|Simple_repeat|Simple_repeat 88712 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-5 chr19 40243830 40244268 + 1.35897270024962 NA intron (NM_016861, intron 3 of 6) intron (NM_016861, intron 3 of 6) 27567 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding unique_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-2 chr13 13169198 13169774 + 1.35897270024962 NA Intergenic Intergenic -13230 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding unique_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-6 chr8 61313032 61313488 + 1.35897270024962 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -24388 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak2_36_16_0.843497899807103_4.50921179115389_1.35897270024962-5 chr7 45524919 45525352 + 1.35897270024962 NA exon (NM_008654, exon 2 of 3) exon (NM_008654, exon 2 of 3) 1133 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding unique_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-4 chr19 10057932 10058601 + 1.35897270024962 NA 3' UTR (NM_021890, exon 12 of 12) 3' UTR (NM_021890, exon 12 of 12) 16718 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding common_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-2 chr7 137438390 137439062 + 1.35897270024962 NA intron (NR_033611, intron 1 of 10) intron (NR_033611, intron 1 of 10) 1052 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 - glutaredoxin 3 pseudogene pseudo unique_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962 chr11 53307552 53308107 + 1.35897270024962 NA Intergenic PB1D10|SINE|Alu -7350 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak2_36_16_0.843497899807103_4.50921179115389_1.35897270024962 chr14 57753309 57753601 + 1.35897270024962 NA Intergenic Intergenic -7332 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_37_16_0.881700613294808_4.52831314789774_1.35897270024962-2 chr16 17405338 17405737 + 1.35897270024962 NA promoter-TSS (NM_023348) promoter-TSS (NM_023348) -463 NM_023348 67474 Mm.271992 NM_023348 ENSMUSG00000022765 Snap29 1300018G05Rik|AI891940|AU020222|BB131856|Gs32 synaptosomal-associated protein 29 protein-coding common_peak2_36_16_0.843497899807103_4.50921179115389_1.35897270024962-2 chr17 7170218 7170574 + 1.35897270024962 NA exon (NM_011299, exon 1 of 21) exon (NM_011299, exon 1 of 21) 281 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-6 chr5 91273877 91274491 + 1.35897270024962 NA intron (NR_040428, intron 3 of 5) intron (NR_040428, intron 3 of 5) 8892 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-6 chr5 137307870 137308271 + 1.35897270024962 NA promoter-TSS (NM_031405) promoter-TSS (NM_031405) -396 NM_001109909 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962 chr11 118365731 118366199 + 1.35897270024962 NA Intergenic Intergenic -10554 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962 chr10 120637228 120637625 + 1.35897270024962 NA Intergenic Intergenic -128306 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_36_16_0.843497899807103_4.50921179115389_1.35897270024962-4 chr19 5346526 5346841 + 1.35897270024962 NA 3' UTR (NM_028623, exon 3 of 3) 3' UTR (NM_028623, exon 3 of 3) 2891 NM_028623 73720 Mm.36816 NM_028623 ENSMUSG00000024846 Cst6 1110017E11Rik|N28197|ichq cystatin E/M protein-coding common_peak2_37_16_0.881700613294808_4.52831314789774_1.35897270024962-4 chr4 141302721 141303105 + 1.35897270024962 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 1692 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-3 chr17 6270665 6271143 + 1.35897270024962 NA intron (NM_001033178, intron 1 of 16) CpG 434 NM_001033178 77106 Mm.381893 NM_001033178 ENSMUSG00000038141 Tmem181a 5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423 transmembrane protein 181A protein-coding common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-4 chr2 59823799 59824160 + 1.35897270024962 NA intron (NM_001290659, intron 18 of 25) intron (NM_001290659, intron 18 of 25) 58627 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak2_37_16_0.881700613294808_4.52831314789774_1.35897270024962-3 chr19 17874047 17874281 + 1.35897270024962 NA Intergenic Intergenic -36532 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962 chr12 79949352 79949922 + 1.35897270024962 NA Intergenic Intergenic -13373 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak2_37_16_0.881700613294808_4.52831314789774_1.35897270024962 chr11 70018600 70019126 + 1.35897270024962 NA 5' UTR (NM_001109752, exon 1 of 20) 5' UTR (NM_001109752, exon 1 of 20) 258 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding common_peak2_36_16_0.843497899807103_4.50921179115389_1.35897270024962-3 chr17 44737690 44737909 + 1.35897270024962 NA intron (NM_001271627, intron 1 of 7) intron (NM_001271627, intron 1 of 7) -1151 NM_001145920 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_36_16_0.843497899807103_4.50921179115389_1.35897270024962-5 chr5 122284511 122285015 + 1.35897270024962 NA exon (NM_177242, exon 1 of 6) exon (NM_177242, exon 1 of 6) 365 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding unique_peak1_37_16_0.881700613294808_4.52831314789774_1.35897270024962-4 chr17 45943513 45943936 + 1.35897270024962 NA Intergenic Intergenic -62272 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA common_peak2_448_426_-0.231419065280274_8.62238272698035_1.35871731677512 chr15 99723199 99726471 + 1.35871731677512 NA promoter-TSS (NM_183256) promoter-TSS (NM_183256) -361 NR_155353 102638434 Mm.364438 NR_155353 Gm16537 - predicted gene 16537 ncRNA common_peak2_33_47_-0.775131643384705_5.1973966790288_1.35770911664594-3 chr9 122351828 122352360 + 1.35770911664594 NA intron (NM_001359207, intron 1 of 4) CpG 478 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding common_peak2_33_47_-0.775131643384705_5.1973966790288_1.35770911664594-2 chr6 135363041 135363673 + 1.35770911664594 NA intron (NM_001288628, intron 1 of 5) intron (NM_001288628, intron 1 of 5) 426 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak1_33_47_-0.775131643384705_5.1973966790288_1.35770911664594-2 chr9 122351841 122352332 + 1.35770911664594 NA intron (NM_001359207, intron 1 of 4) CpG 470 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding common_peak1_33_47_-0.775131643384705_5.1973966790288_1.35770911664594 chr2 31572191 31572597 + 1.35770911664594 NA promoter-TSS (NM_001033389) promoter-TSS (NM_001033389) -257 NM_001033389 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding common_peak2_33_47_-0.775131643384705_5.1973966790288_1.35770911664594 chr17 56475713 56476742 + 1.35770911664594 NA intron (NM_001252455, intron 1 of 27) CpG 253 NM_001252455 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding common_peak1_56_28_0.69201806164503_5.20399002595009_1.35770911664593-2 chr13 41662069 41662385 + 1.35770911664593 NA Intergenic Intergenic 56011 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_56_28_0.69201806164503_5.20399002595009_1.35770911664593 chr2 152904536 152905305 + 1.35770911664593 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -6432 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak1_56_28_0.69201806164503_5.20399002595009_1.35770911664593 chr11 20830501 20831016 + 1.35770911664593 NA intron (NM_173752, intron 1 of 4) CpG 350 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak1_56_28_0.69201806164503_5.20399002595009_1.35770911664593-3 chr19 59590542 59591213 + 1.35770911664593 NA Intergenic Intergenic 97741 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak2_56_28_0.69201806164503_5.20399002595009_1.35770911664593 chr5 107597812 107598285 + 1.35770911664593 NA promoter-TSS (NM_001161738) promoter-TSS (NM_001161738) 87 NM_001359916 231571 Mm.482420 NM_144911 ENSMUSG00000033773 Rpap2 AW060207 RNA polymerase II associated protein 2 protein-coding common_peak1_115_67_0.480395200553683_6.32766044152718_1.35721122071865-2 chr19 4227812 4229345 + 1.35721122071865 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) -3315 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak1_115_67_0.480395200553683_6.32766044152718_1.35721122071865-3 chr19 6117618 6118802 + 1.35721122071865 NA exon (NM_133678, exon 1 of 2) exon (NM_133678, exon 1 of 2) 376 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding common_peak1_115_67_0.480395200553683_6.32766044152718_1.35721122071865 chr10 128091859 128093487 + 1.35721122071865 NA promoter-TSS (NM_054078) promoter-TSS (NM_054078) -110 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_260_169_0.320138310121231_7.56946009119832_1.35709820783597 chr3 144204078 144206636 + 1.35709820783597 NA promoter-TSS (NM_010723) promoter-TSS (NM_010723) -102 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_205_130_0.357109383947533_7.21197769351122_1.35611713863999 chr7 45017455 45019290 + 1.35611713863999 NA intron (NM_009101, intron 1 of 5) intron (NM_009101, intron 1 of 5) 430 NM_009101 20130 Mm.389894 NM_009101 ENSMUSG00000038387 Rras AI573426 related RAS viral (r-ras) oncogene protein-coding common_peak1_157_96_0.410599844514905_6.80521276444458_1.3558234454049 chr1 191717646 191719226 + 1.3558234454049 NA promoter-TSS (NM_001134829) promoter-TSS (NM_001134829) 41 NM_001134829 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak2_69_83_-0.548016409806202_6.11830921787566_1.35565283421423 chr17 80786513 80787864 + 1.35565283421423 NA Intergenic Intergenic -59163 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_101_57_0.52563048486309_6.12079623755912_1.35565283421421 chr15 28132509 28133291 + 1.35565283421421 NA Intergenic Intergenic -70866 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak1_101_57_0.52563048486309_6.12079623755912_1.35565283421421 chr15 11084317 11085129 + 1.35565283421421 NA intron (NM_175501, intron 2 of 23) intron (NM_175501, intron 2 of 23) 19950 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding unique_peak1_101_57_0.52563048486309_6.12079623755912_1.35565283421421 chr13 70792594 70794197 + 1.35565283421421 NA intron (NM_172053, intron 6 of 22) intron (NM_172053, intron 6 of 22) 48416 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak1_100_57_0.511516904129842_6.11373944719249_1.35565283421421 chr5 35672080 35673099 + 1.35565283421421 NA intron (NM_001042615, intron 1 of 6) intron (NM_001042615, intron 1 of 6) 7191 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_75_89_-0.529744621357772_6.22698078565079_1.35503563994553 chr8 27085032 27085955 + 1.35503563994553 NA promoter-TSS (NM_054044) promoter-TSS (NM_054044) -348 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak2_74_89_-0.548718631949912_6.21749378035472_1.35503563994553 chr7 130519603 130520313 + 1.35503563994553 NA promoter-TSS (NM_001136054) promoter-TSS (NM_001136054) -378 NM_013799 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding common_peak1_108_62_0.501414961628529_6.22798740431418_1.35503563994552 chr4 126109545 126110937 + 1.35503563994552 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 6284 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_186_116_0.381546516559068_7.06113797786294_1.35429615182351 chr13 28756760 28758881 + 1.35429615182351 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -46947 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_185_116_0.373865442623587_7.0572974408952_1.35429615182351 chr3 88501488 88503242 + 1.35429615182351 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 987 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_140_84_0.438050989818564_6.62841643104698_1.35394859712804-2 chr8 13158705 13160031 + 1.35394859712804 NA 5' UTR (NM_001317353, exon 1 of 9) 5' UTR (NM_001317353, exon 1 of 9) 207 NM_010684 16783 Mm.16716 NM_010684 ENSMUSG00000031447 Lamp1 CD107a|LGP-120|LGP-A|Lamp-1|P2B|Perk lysosomal-associated membrane protein 1 protein-coding common_peak1_140_84_0.438050989818564_6.62841643104698_1.35394859712804 chr2 131910054 131910981 + 1.35394859712804 NA intron (NM_001278256, intron 1 of 3) intron (NM_001278256, intron 1 of 3) 589 NM_001278256 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding common_peak1_149_90_0.428284844607822_6.72193706250261_1.3539117513912 chr1 180726030 180727142 + 1.3539117513912 NA intron (NM_133225, intron 1 of 7) CpG 543 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak2_148_90_0.41870275632657_6.71714601836198_1.3539117513912 chr19 56993351 56994512 + 1.3539117513912 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 14644 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_229_232_-0.315785903250636_7.70629319302896_1.35251547300846 chr4 125125003 125127908 + 1.35251547300846 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 1426 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_125_137_-0.422209138104578_6.89741988772588_1.35048278929447 chr1 155049256 155051135 + 1.35048278929447 NA Intergenic Intergenic 33069 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_57_72_-0.614911537502751_5.88236879012864_1.3503990867063 chr10 68276598 68277530 + 1.3503990867063 NA intron (NM_023598, intron 2 of 9) CpG 1662 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_57_72_-0.614911537502751_5.88236879012864_1.3503990867063 chr18 82691925 82692666 + 1.3503990867063 NA intron (NM_177832, intron 1 of 29) CpG 439 NM_177832 329002 Mm.34438 NM_177832 ENSMUSG00000041258 Zfp236 AI447957|Gm335 zinc finger protein 236 protein-coding common_peak2_58_72_-0.590423473557338_5.89461282210135_1.3503990867063 chr1 151499781 151500719 + 1.3503990867063 NA intron (NM_001360844, intron 1 of 8) CpG 741 NM_001360845 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding common_peak1_160_169_-0.371933564340562_7.22342415396742_1.34904508957555 chr8 122566789 122568407 + 1.34904508957555 NA promoter-TSS (NM_026014) promoter-TSS (NM_026014) -417 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding unique_peak2_29_43_-0.828899073438168_5.04498208191821_1.34810744351377 chr11 97809190 97810135 + 1.34810744351377 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 10097 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_51_25_0.718043476740777_5.05946145651148_1.34810744351377-3 chr4 40820398 40820788 + 1.34810744351377 NA intron (NM_022305, intron 2 of 5) intron (NM_022305, intron 2 of 5) 29545 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_29_43_-0.828899073438168_5.04498208191821_1.34810744351377 chr17 26510129 26510838 + 1.34810744351377 NA Intergenic Intergenic -2011 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_51_25_0.718043476740777_5.05946145651148_1.34810744351377-4 chr7 144027489 144028484 + 1.34810744351377 NA Intergenic Intergenic 18732 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_51_25_0.718043476740777_5.05946145651148_1.34810744351377 chr11 75406351 75407154 + 1.34810744351377 NA Intergenic Intergenic 15871 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak2_51_25_0.718043476740777_5.05946145651148_1.34810744351377 chr12 33181552 33181845 + 1.34810744351377 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 34012 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_29_43_-0.828899073438168_5.04498208191821_1.34810744351377-2 chr4 32520094 32520706 + 1.34810744351377 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 51262 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak1_51_25_0.718043476740777_5.05946145651148_1.34810744351377-2 chr12 70937882 70938340 + 1.34810744351377 NA intron (NM_019785, intron 1 of 12) CpG 254 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-2 chr19 41481923 41482420 + 1.34608670144205 NA Intergenic Intergenic -43081 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205-2 chr3 116380041 116380310 + 1.34608670144205 NA intron (NM_001080818, intron 4 of 15) intron (NM_001080818, intron 4 of 15) -25931 NM_001355646 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-4 chr18 68120387 68120842 + 1.34608670144205 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -107332 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205-4 chr8 22808370 22808877 + 1.34608670144205 NA Intergenic Intergenic -2969 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak2_22_35_-0.920016720072813_4.70991664140591_1.34608670144205-2 chr17 23802410 23802849 + 1.34608670144205 NA promoter-TSS (NM_175229) promoter-TSS (NM_175229) -558 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205-3 chr4 139234495 139235035 + 1.34608670144205 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 40654 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_41_19_0.790606601132017_4.71723139545337_1.34608670144205 chr10 67185927 67186287 + 1.34608670144205 NA 5' UTR (NM_001242396, exon 1 of 25) 5' UTR (NM_001242396, exon 1 of 25) 357 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-4 chr2 29964403 29965011 + 1.34608670144205 NA promoter-TSS (NM_001309460) promoter-TSS (NM_001309460) -853 NM_001177668 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding common_peak2_42_19_0.824314435322069_4.7340853125484_1.34608670144205-2 chr7 112143328 112143664 + 1.34608670144205 NA intron (NM_001360261, intron 3 of 6) intron (NM_001360261, intron 3 of 6) 15200 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205-3 chr5 140505879 140506516 + 1.34608670144205 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 588 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205 chr12 73790246 73790800 + 1.34608670144205 NA Intergenic Intergenic -110801 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_41_19_0.790606601132017_4.71723139545337_1.34608670144205-2 chr10 80955890 80956156 + 1.34608670144205 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 25932 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-8 chr9 106475404 106476031 + 1.34608670144205 NA intron (NM_145619, intron 2 of 10) B1_Mus1|SINE|Alu 1232 NM_001311150 235587 Mm.273659 NM_145619 ENSMUSG00000023249 Parp3 A930002C11Rik|AW990611|Adprt3|Adprtl3|PARP-3|pADPRT-3 poly (ADP-ribose) polymerase family, member 3 protein-coding common_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-3 chr2 28225417 28225997 + 1.34608670144205 NA intron (NM_001038613, intron 5 of 5) intron (NM_001038613, intron 5 of 5) 20018 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-5 chr3 129316607 129317137 + 1.34608670144205 NA intron (NM_007934, intron 3 of 19) intron (NM_007934, intron 3 of 19) 15877 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-7 chr7 28741348 28741721 + 1.34608670144205 NA promoter-TSS (NM_023637) promoter-TSS (NM_023637) 287 NM_001360252 24030 Mm.358650 NM_011885 ENSMUSG00000045948 Mrps12 AI327385|Rpms12|rps12 mitochondrial ribosomal protein S12 protein-coding common_peak2_22_35_-0.920016720072813_4.70991664140591_1.34608670144205-3 chr9 55937781 55938007 + 1.34608670144205 NA intron (NM_001357652, intron 1 of 32) CpG 225 NM_001357652 244891 Mm.86588 NM_175536 ENSMUSG00000034007 Scaper C430017I08|D530014O03Rik|Zfp291 S phase cyclin A-associated protein in the ER protein-coding common_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205 chr18 35828885 35829514 + 1.34608670144205 NA promoter-TSS (NM_133687) promoter-TSS (NM_133687) -589 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-3 chr14 67008173 67008876 + 1.34608670144205 NA intron (NM_009761, intron 1 of 5) CpG 353 NM_009761 12177 Mm.29820 NM_009761 ENSMUSG00000022051 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205 chr1 77496772 77497471 + 1.34608670144205 NA promoter-TSS (NR_105770) promoter-TSS (NR_105770) -353 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205 chr15 81911821 81912233 + 1.34608670144205 NA intron (NM_080633, intron 13 of 17) intron (NM_080633, intron 13 of 17) 14186 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-2 chr10 120208748 120209452 + 1.34608670144205 NA intron (NM_026617, intron 1 of 6) URR1B|DNA|hAT-Charlie 274 NM_026617 68212 Mm.157426 NM_026617 ENSMUSG00000020225 Tmbim4 0610007H07Rik|AU022431 transmembrane BAX inhibitor motif containing 4 protein-coding common_peak2_22_35_-0.920016720072813_4.70991664140591_1.34608670144205 chr13 55444550 55444904 + 1.34608670144205 NA promoter-TSS (NM_001286063) promoter-TSS (NM_001286063) -345 NM_001286063 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding unique_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205-2 chr4 105159173 105159817 + 1.34608670144205 NA intron (NM_080555, intron 1 of 5) intron (NM_080555, intron 1 of 5) 2148 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak2_22_35_-0.920016720072813_4.70991664140591_1.34608670144205-3 chr9 29331622 29332255 + 1.34608670144205 NA intron (NM_001357601, intron 1 of 7) intron (NM_001357601, intron 1 of 7) 80747 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak1_41_19_0.790606601132017_4.71723139545337_1.34608670144205-6 chr4 15944721 15945630 + 1.34608670144205 NA intron (NM_026172, intron 1 of 9) CpG 332 NM_026172 67460 Mm.393293 NM_026172 ENSMUSG00000028223 Decr1 1200012F07Rik|Decr|Nadph 2,4-dienoyl CoA reductase 1, mitochondrial protein-coding common_peak2_41_19_0.790606601132017_4.71723139545337_1.34608670144205-3 chr8 25090537 25090946 + 1.34608670144205 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 11070 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak2_22_35_-0.920016720072813_4.70991664140591_1.34608670144205-2 chr5 135714324 135714951 + 1.34608670144205 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 21252 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA common_peak2_42_19_0.824314435322069_4.7340853125484_1.34608670144205 chr14 21499930 21500356 + 1.34608670144205 NA intron (NM_017479, intron 1 of 16) CpG 358 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak2_22_35_-0.920016720072813_4.70991664140591_1.34608670144205 chr10 31445280 31445787 + 1.34608670144205 NA intron (NM_001359365, intron 1 of 6) intron (NM_001359365, intron 1 of 6) 425 NM_001359365 21987 Mm.439966 NM_009413 ENSMUSG00000000296 Tpd52l1 D53 tumor protein D52-like 1 protein-coding common_peak1_42_19_0.824314435322069_4.7340853125484_1.34608670144205-4 chr7 80629210 80629894 + 1.34608670144205 NA intron (NM_173863, intron 3 of 14) intron (NM_173863, intron 3 of 14) -6465 NR_040343 100504375 Mm.322881 NR_040343 ENSMUSG00000084821 Gm15880 - predicted gene 15880 ncRNA common_peak2_169_178_-0.368437980320414_7.29959678710405_1.34557014442118 chr13 48966418 48968787 + 1.34557014442118 NA promoter-TSS (NR_015601) promoter-TSS (NR_015601) 226 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding common_peak2_38_52_-0.72154667788063_5.36714711562288_1.34506277748691-2 chr11 113070540 113071718 + 1.34506277748691 NA intron (NR_015556, intron 1 of 2) intron (NR_015556, intron 1 of 2) 130709 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak2_38_52_-0.72154667788063_5.36714711562288_1.34506277748691 chr11 8673887 8674819 + 1.34506277748691 NA Intergenic B1_Mur1|SINE|Alu -9818 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_38_52_-0.72154667788063_5.36714711562288_1.34506277748691 chr1 38439186 38440122 + 1.34506277748691 NA intron (NM_001290814, intron 4 of 21) intron (NM_001290814, intron 4 of 21) 187590 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding common_peak1_62_32_0.648976178888381_5.36888220880264_1.3450627774869 chr6 31077723 31078484 + 1.3450627774869 NA Intergenic Intergenic -15010 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_132_79_0.44183942965867_6.5428478097167_1.34502200639345 chr15 89176609 89177710 + 1.34502200639345 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) -3208 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak2_82_96_-0.51158922129621_6.34411823153902_1.34420264055709 chr13 113793985 113795617 + 1.34420264055709 NA intron (NM_172595, intron 1 of 4) CpG 293 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak1_117_68_0.483821648971266_6.3504352812638_1.34420264055706 chr7 142083516 142084885 + 1.34420264055706 NA intron (NM_008748, intron 4 of 6) intron (NM_008748, intron 4 of 6) 11084 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak1_110_123_-0.449454946675222_6.72946883704926_1.34399697929457 chr11 102295550 102297024 + 1.34399697929457 NA intron (NM_001098836, intron 1 of 12) CpG 342 NM_001098836 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding common_peak2_110_123_-0.449454946675222_6.72946883704926_1.34399697929457 chr17 28349239 28351169 + 1.34399697929457 NA 5' UTR (NM_001204156, exon 1 of 13) 5' UTR (NM_001204156, exon 1 of 13) 142 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak1_150_91_0.422035948200026_6.73457993015703_1.34399697929457 chr8 31521292 31522356 + 1.34399697929457 NA Intergenic Intergenic 154075 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-2 chr7 7121067 7121461 + 1.34355844763204 NA exon (NM_172738, exon 1 of 5) exon (NM_172738, exon 1 of 5) 212 NM_172738 232853 Mm.23838 NM_172738 ENSMUSG00000062116 Zfp954 5730403M16Rik|8030437F07|AA123315 zinc finger protein 954 protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-4 chr12 4817737 4818134 + 1.34355844763204 NA intron (NM_025323, intron 1 of 3) intron (NM_025323, intron 1 of 3) 327 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak1_26_39_-0.84232626441396_4.90076496268038_1.34355844763204 chr10 86173793 86174306 + 1.34355844763204 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 78195 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_26_39_-0.84232626441396_4.90076496268038_1.34355844763204-2 chr16 10979667 10980098 + 1.34355844763204 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 13239 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204 chr1 183145807 183146416 + 1.34355844763204 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 1446 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak2_26_39_-0.84232626441396_4.90076496268038_1.34355844763204-3 chrX 164076267 164076753 + 1.34355844763204 NA promoter-TSS (NM_001308385) promoter-TSS (NM_001308385) -17 NM_001308385 20438 Mm.37215 NM_009173 ENSMUSG00000040749 Siah1b AA960570|Sinh1b|siah-1b siah E3 ubiquitin protein ligase 1B protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-6 chr2 151974556 151974997 + 1.34355844763204 NA promoter-TSS (NM_001289150) promoter-TSS (NM_001289150) -795 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak2_26_39_-0.84232626441396_4.90076496268038_1.34355844763204-2 chr5 35616525 35617248 + 1.34355844763204 NA Intergenic Intergenic -28123 NR_045807 74364 Mm.473123 NM_175208 ENSMUSG00000055061 4931431C16Rik - RIKEN cDNA 4931431C16 gene ncRNA common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-2 chr10 127069589 127070203 + 1.34355844763204 NA promoter-TSS (NR_040660) promoter-TSS (NR_040660) 365 NM_025982 67125 Mm.35650 NM_025982 ENSMUSG00000006736 Tspan31 2700085A14Rik|AW742554|Sas tetraspanin 31 protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-8 chr9 122373777 122374348 + 1.34355844763204 NA intron (NR_152865, intron 2 of 5) intron (NR_152865, intron 2 of 5) 22446 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding unique_peak2_26_39_-0.84232626441396_4.90076496268038_1.34355844763204 chr19 9059014 9059553 + 1.34355844763204 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 28673 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-7 chr6 86900872 86901314 + 1.34355844763204 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 51576 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-3 chr11 68871292 68871792 + 1.34355844763204 NA Intergenic Intergenic -17011 NM_177060 320040 Mm.305696 NM_177060 ENSMUSG00000046490 Rnf222 9930039A11Rik ring finger protein 222 protein-coding common_peak2_26_39_-0.84232626441396_4.90076496268038_1.34355844763204 chr12 25098474 25098725 + 1.34355844763204 NA Intergenic CpG -2507 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204-5 chr2 60870791 60871076 + 1.34355844763204 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 10505 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_26_39_-0.84232626441396_4.90076496268038_1.34355844763204-2 chr4 89055533 89056147 + 1.34355844763204 NA intron (NR_033533, intron 1 of 2) intron (NR_033533, intron 1 of 2) 5533 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak1_46_22_0.750099347245041_4.89861162967953_1.34355844763204 chr3 85812289 85813264 + 1.34355844763204 NA Intergenic Intergenic -66567 NM_172682 229488 Mm.119926 NM_172682 ENSMUSG00000051000 Fam160a1 9930021J17Rik family with sequence similarity 160, member A1 protein-coding common_peak2_53_67_-0.61491599035018_5.78000484607525_1.34343841539451 chr1 43259700 43260566 + 1.34343841539451 NA Intergenic Intergenic -63372 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_53_67_-0.61491599035018_5.78000484607525_1.34343841539451-2 chr6 98956070 98956753 + 1.34343841539451 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 71887 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_81_44_0.579106471270763_5.78140633196506_1.34343841539451 chr11 75509877 75510693 + 1.34343841539451 NA TTS (NM_138659) TTS (NM_138659) 191 NM_001029938 280408 Mm.41416 NM_001029938 ENSMUSG00000038195 Rilp AI835553|Gm857 Rab interacting lysosomal protein protein-coding common_peak1_52_67_-0.641692785980479_5.7666164482601_1.34343841539451 chr4 62741644 62742328 + 1.34343841539451 NA Intergenic Intergenic 68012 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_81_44_0.579106471270763_5.78140633196506_1.34343841539451-2 chr13 54590265 54591348 + 1.34343841539451 NA promoter-TSS (NM_178605) promoter-TSS (NM_178605) 575 NM_025933 67044 Mm.29353 NM_025933 ENSMUSG00000025868 Higd2a 2010110M21Rik|AA690237 HIG1 domain family, member 2A protein-coding common_peak1_81_44_0.579106471270763_5.78140633196506_1.34343841539451-4 chr5 105876629 105877358 + 1.34343841539451 NA intron (NR_030777, intron 1 of 9) CpG 425 NM_018759 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_81_44_0.579106471270763_5.78140633196506_1.34343841539451-3 chr4 155733614 155734681 + 1.34343841539451 NA promoter-TSS (NM_001101506) promoter-TSS (NM_001101506) -657 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding common_peak2_64_78_-0.565640654541355_6.02096042090642_1.34341979543973 chr13 5860514 5861093 + 1.34341979543973 NA promoter-TSS (NM_011803) promoter-TSS (NM_011803) -686 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_94_53_0.526877871562313_6.01832643794462_1.34341979543973 chr4 83309215 83309863 + 1.34341979543973 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 14650 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_141_85_0.43130100743139_6.64191525841779_1.34338701864341 chr1 43934060 43934976 + 1.34338701864341 NA intron (NM_009418, intron 1 of 29) CpG 524 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak2_141_85_0.43130100743139_6.64191525841779_1.34338701864341 chr3 113629871 113630794 + 1.34338701864341 NA promoter-TSS (NM_026043) promoter-TSS (NM_026043) -183 NM_001038696 67225 Mm.316928 NM_026043 ENSMUSG00000027981 Rnpc3 2810441O16Rik|AI447568|C030014B17Rik RNA-binding region (RNP1, RRM) containing 3 protein-coding common_peak1_141_85_0.43130100743139_6.64191525841779_1.34338701864341-2 chr6 38433383 38434797 + 1.34338701864341 NA 5' UTR (NM_177185, exon 1 of 17) 5' UTR (NM_177185, exon 1 of 17) 165 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding common_peak1_103_116_-0.458936504274781_6.64089646744601_1.34338701864338 chr11 116329965 116331366 + 1.34338701864338 NA TTS (NM_008240) TTS (NM_008240) 4689 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak2_161_170_-0.371525041331529_7.23208999422013_1.34206746660553 chr8 128449794 128451661 + 1.34206746660553 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 91486 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_168_104_0.39268082787982_6.91058593160603_1.34175158952685 chr8 70905514 70906664 + 1.34175158952685 NA exon (NM_173013, exon 1 of 7) exon (NM_173013, exon 1 of 7) 115 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding common_peak1_168_104_0.39268082787982_6.91058593160603_1.34175158952685 chr8 70905513 70906666 + 1.34175158952685 NA exon (NM_173013, exon 1 of 7) exon (NM_173013, exon 1 of 7) 115 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding common_peak1_109_63_0.491777321777694_6.24588866088885_1.34111088227537 chr2 90745508 90746410 + 1.34111088227537 NA intron (NM_018828, intron 1 of 16) CpG 589 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak1_102_58_0.514944315696385_6.14011520721003_1.34062813340368 chr2 164439429 164440799 + 1.34062813340368 NA intron (NM_011521, intron 1 of 4) B3|SINE|B2 3074 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak2_43_57_-0.678805592530511_5.51857819886232_1.33966217785262 chr18 64488171 64488937 + 1.33966217785262 NA intron (NM_007998, intron 1 of 10) (CAAA)n|Simple_repeat|Simple_repeat 544 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding common_peak2_43_57_-0.678805592530511_5.51857819886232_1.33966217785262-2 chr7 126199922 126200399 + 1.33966217785262 NA 5' UTR (NM_001311143, exon 1 of 24) 5' UTR (NM_001311143, exon 1 of 24) 341 NM_001311143 74204 Mm.235663 NM_028816 ENSMUSG00000000131 Xpo6 2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|exp6|mKIAA0370 exportin 6 protein-coding common_peak1_43_57_-0.678805592530511_5.51857819886232_1.33966217785262 chr7 126199915 126200395 + 1.33966217785262 NA 5' UTR (NM_001311143, exon 1 of 24) 5' UTR (NM_001311143, exon 1 of 24) 346 NM_001311143 74204 Mm.235663 NM_028816 ENSMUSG00000000131 Xpo6 2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|exp6|mKIAA0370 exportin 6 protein-coding common_peak2_43_57_-0.678805592530511_5.51857819886232_1.33966217785262-3 chr8 126601218 126601955 + 1.33966217785262 NA Intergenic Intergenic -8150 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_68_36_0.614235538394759_5.51657113482633_1.33966217785261-2 chr5 33273900 33274544 + 1.33966217785261 NA intron (NM_001198860, intron 1 of 9) CpG 782 NM_001310535 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding unique_peak1_69_36_0.634847647343609_5.52687718930075_1.33966217785261 chr2 33466636 33467672 + 1.33966217785261 NA intron (NM_001355611, intron 1 of 2) intron (NM_001355611, intron 1 of 2) 1378 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak2_68_36_0.614235538394759_5.51657113482633_1.33966217785261-2 chr8 95331183 95331677 + 1.33966217785261 NA promoter-TSS (NM_133954) promoter-TSS (NM_133954) 520 NM_024467 79233 Mm.350514 NM_024467 ENSMUSG00000046556 Zfp319 AI225750|AI413472|Znf319|mKIAA1388 zinc finger protein 319 protein-coding common_peak1_69_36_0.634847647343609_5.52687718930075_1.33966217785261-2 chr14 45529220 45529958 + 1.33966217785261 NA 5' UTR (NM_001360525, exon 2 of 16) 5' UTR (NM_001360525, exon 2 of 16) 476 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_69_36_0.634847647343609_5.52687718930075_1.33966217785261 chr12 84918691 84919715 + 1.33966217785261 NA 3' UTR (NM_178065, exon 20 of 20) 3' UTR (NM_178065, exon 20 of 20) -42708 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak2_68_36_0.614235538394759_5.51657113482633_1.33966217785261 chr3 121291846 121292737 + 1.33966217785261 NA intron (NR_155539, intron 1 of 2) intron (NR_155539, intron 1 of 2) 551 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_68_36_0.614235538394759_5.51657113482633_1.33966217785261-3 chr6 47920677 47921429 + 1.33966217785261 NA intron (NM_145576, intron 1 of 4) intron (NM_145576, intron 1 of 4) 485 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak1_69_36_0.634847647343609_5.52687718930075_1.33966217785261-3 chr7 141474091 141474974 + 1.33966217785261 NA promoter-TSS (NM_053082) promoter-TSS (NM_053082) 621 NM_025593 66491 Mm.380115 NM_025593 ENSMUSG00000038489 Polr2l 2510029B14Rik polymerase (RNA) II (DNA directed) polypeptide L protein-coding common_peak1_68_36_0.614235538394759_5.51657113482633_1.33966217785261 chr12 72084545 72085392 + 1.33966217785261 NA promoter-TSS (NM_001205067) promoter-TSS (NM_001205067) 345 NM_026038 67217 Mm.286120 NM_026038 ENSMUSG00000019718 L3hypdh 2810055F11Rik L-3-hydroxyproline dehydratase (trans-) protein-coding common_peak2_48_62_-0.643921780133862_5.65531903343299_1.33955643568472-3 chr11 115413393 115413764 + 1.33955643568472 NA TTS (NM_001347645) TTS (NM_001347645) 6341 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding common_peak2_47_62_-0.673459256627911_5.64055029518596_1.33955643568472 chr1 40173629 40174254 + 1.33955643568472 NA Intergenic Intergenic -51139 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_48_62_-0.643921780133862_5.65531903343299_1.33955643568472-2 chr1 54829475 54830182 + 1.33955643568472 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 96559 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_48_62_-0.643921780133862_5.65531903343299_1.33955643568472-4 chr17 70720370 70720922 + 1.33955643568472 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 126131 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_48_62_-0.643921780133862_5.65531903343299_1.33955643568472 chr11 115413397 115413760 + 1.33955643568472 NA TTS (NM_001347645) TTS (NM_001347645) 6341 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding common_peak2_48_62_-0.643921780133862_5.65531903343299_1.33955643568472 chr1 9636070 9637038 + 1.33955643568472 NA Intergenic Intergenic -5462 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA common_peak2_47_62_-0.673459256627911_5.64055029518596_1.33955643568472-2 chr15 61984778 61985240 + 1.33955643568472 NA promoter-TSS (NM_010849) promoter-TSS (NM_010849) -332 NM_001177354 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak2_48_62_-0.643921780133862_5.65531903343299_1.33955643568472-5 chr3 41377188 41378085 + 1.33955643568472 NA Intergenic Intergenic 115563 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_47_62_-0.673459256627911_5.64055029518596_1.33955643568472-3 chr19 44135225 44135853 + 1.33955643568472 NA promoter-TSS (NM_001356578) promoter-TSS (NM_001356578) -83 NM_001356578 72502 Mm.276109 NM_001081077 ENSMUSG00000025200 Cwf19l1 - CWF19-like 1, cell cycle control (S. pombe) protein-coding unique_peak1_75_40_0.604556470353819_5.65983023979499_1.33955643568472 chr2 153592169 153593159 + 1.33955643568472 NA Intergenic Intergenic 40117 NM_001195390 99311 Mm.294478 NM_133850 ENSMUSG00000056941 Commd7 2310010I22Rik|AW060956|mU3 COMM domain containing 7 protein-coding common_peak1_47_62_-0.673459256627911_5.64055029518596_1.33955643568472 chr11 60726480 60727183 + 1.33955643568472 NA intron (NM_022009, intron 1 of 29) intron (NM_022009, intron 1 of 29) 432 NM_022009 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding common_peak1_74_40_0.585582459761679_5.65034323449892_1.33955643568472 chr13 54693365 54693840 + 1.33955643568472 NA intron (NR_027396, intron 1 of 10) CpG 358 NR_027395 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_74_40_0.585582459761679_5.65034323449892_1.33955643568472-2 chr19 4210392 4211156 + 1.33955643568472 NA Intergenic Intergenic -3464 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-31 chr17 35127104 35127302 + 1.33892459842472 NA exon (NM_033477, exon 3 of 3) exon (NM_033477, exon 3 of 3) 801 NM_033477 114585 Mm.42070 NM_033477 ENSMUSG00000043311 D17H6S53E G4|NG34 DNA segment, Chr 17, human D6S53E protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-36 chr2 91948676 91948880 + 1.33892459842472 NA intron (NM_001166597, intron 1 of 31) intron (NM_001166597, intron 1 of 31) 1570 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-57 chr4 45585210 45585448 + 1.33892459842472 NA Intergenic Intergenic -54501 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-42 chr4 58153911 58154121 + 1.33892459842472 NA intron (NM_022814, intron 3 of 47) intron (NM_022814, intron 3 of 47) 52580 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-44 chr2 145759077 145759304 + 1.33892459842472 NA Intergenic Intergenic -26926 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-51 chr3 83846433 83846721 + 1.33892459842472 NA Intergenic Intergenic -4969 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-12 chr11 48983191 48983400 + 1.33892459842472 NA Intergenic Intergenic -3897 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-9 chr10 78473339 78473578 + 1.33892459842472 NA Intergenic Intergenic -8510 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-83 chr8 128023867 128024105 + 1.33892459842472 NA Intergenic Intergenic 254239 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-17 chr13 29638208 29638409 + 1.33892459842472 NA intron (NR_131896, intron 8 of 16) intron (NR_131896, intron 8 of 16) 217365 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-5 chr10 57514776 57515010 + 1.33892459842472 NA TTS (NM_019760) TTS (NM_019760) 17636 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-21 chr15 43438376 43438634 + 1.33892459842472 NA intron (NR_046064, intron 2 of 2) intron (NR_046064, intron 2 of 2) 38531 NR_046064 100038728 Mm.244168 NR_046064 ENSMUSG00000072592 Gm10373 - predicted gene 10373 ncRNA unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-28 chr18 38798568 38798792 + 1.33892459842472 NA Intergenic Intergenic -93776 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-37 chr2 117958720 117958942 + 1.33892459842472 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 136903 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-22 chr15 10750557 10750797 + 1.33892459842472 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 35777 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-27 chr16 84720228 84720455 + 1.33892459842472 NA intron (NM_017404, intron 8 of 9) intron (NM_017404, intron 8 of 9) 6201 NR_029565 387173 NR_029565 ENSMUSG00000065397 Mir155 Mirn155|mir-155|mmu-mir-155 microRNA 155 ncRNA unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-56 chr9 72715755 72715967 + 1.33892459842472 NA intron (NM_010890, intron 9 of 28) B3|SINE|B2 22563 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-41 chr19 46474794 46475105 + 1.33892459842472 NA intron (NM_001025391, intron 9 of 11) intron (NM_001025391, intron 9 of 11) -26699 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-18 chr14 20873570 20873806 + 1.33892459842472 NA Intergenic Intergenic 37026 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-82 chr8 126790837 126791062 + 1.33892459842472 NA Intergenic Intergenic -58071 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-73 chr7 80803627 80803822 + 1.33892459842472 NA promoter-TSS (NM_016721) promoter-TSS (NM_016721) -393 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-20 chr15 36279497 36279785 + 1.33892459842472 NA intron (NM_001357631, intron 1 of 7) intron (NM_001357631, intron 1 of 7) 3506 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-23 chr16 13258428 13258637 + 1.33892459842472 NA intron (NM_001122667, intron 1 of 16) intron (NM_001122667, intron 1 of 16) 2051 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-43 chr2 36048261 36048465 + 1.33892459842472 NA intron (NM_026703, intron 1 of 3) intron (NM_026703, intron 1 of 3) 929 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-5 chr4 59389114 59389313 + 1.33892459842472 NA intron (NM_001163288, intron 6 of 16) intron (NM_001163288, intron 6 of 16) 49420 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-3 chr1 184072108 184072349 + 1.33892459842472 NA intron (NM_022019, intron 3 of 3) intron (NM_022019, intron 3 of 3) 37847 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-6 chr10 77534436 77534632 + 1.33892459842472 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 4186 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-30 chr19 32907962 32908341 + 1.33892459842472 NA Intergenic Intergenic 150574 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-56 chr3 138848197 138848435 + 1.33892459842472 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 106108 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-18 chr13 35760222 35760478 + 1.33892459842472 NA intron (NM_001123386, intron 1 of 6) RSINE1|SINE|B4 18948 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-52 chr7 68054858 68055149 + 1.33892459842472 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 102746 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-50 chr3 81372918 81373108 + 1.33892459842472 NA Intergenic Intergenic 336597 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-3 chr3 122319915 122320206 + 1.33892459842472 NA Intergenic Intergenic -26357 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-57 chr9 104306097 104306347 + 1.33892459842472 NA intron (NM_207668, intron 9 of 10) intron (NM_207668, intron 9 of 10) 31500 NM_019807 56318 Mm.19941 NM_019807 ENSMUSG00000032561 Acpp 5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal acid phosphatase, prostate protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472 chr1 20620723 20620988 + 1.33892459842472 NA Intergenic Intergenic -2798 NM_153179 241035 Mm.249253 NM_153179 ENSMUSG00000043760 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-28 chr17 23599437 23599763 + 1.33892459842472 NA promoter-TSS (NM_011747) promoter-TSS (NM_011747) -113 NM_011747 22654 Mm.40326 NM_011747 ENSMUSG00000062012 Zfp13 AI835008|Krox-8|Zfp-13 zinc finger protein 13 protein-coding common_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472 chr13 56704196 56704408 + 1.33892459842472 NA intron (NM_001164042, intron 1 of 6) PB1D7|SINE|Alu 634 NM_001164042 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-59 chr4 63055812 63056076 + 1.33892459842472 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 90370 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-13 chr11 70185811 70186037 + 1.33892459842472 NA Intergenic Intergenic 19301 NM_010796 17312 Mm.252405 NM_010796 ENSMUSG00000000318 Clec10a CD301a|M-ASGP-BP-1|Mgl|Mgl1 C-type lectin domain family 10, member A protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-76 chr7 142377690 142377877 + 1.33892459842472 NA intron (NM_009983, intron 5 of 8) intron (NM_009983, intron 5 of 8) -4037 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-14 chr12 88467206 88467403 + 1.33892459842472 NA Intergenic Intergenic -89981 NR_045888 71818 Mm.490789 NR_045888 ENSMUSG00000113434 3200001D21Rik - RIKEN cDNA 3200001D21 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-25 chr15 90609817 90610042 + 1.33892459842472 NA intron (NM_025815, intron 5 of 19) intron (NM_025815, intron 5 of 19) 69459 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-40 chr4 32302511 32302748 + 1.33892459842472 NA Intergenic Intergenic -114806 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-53 chr3 98227407 98227609 + 1.33892459842472 NA intron (NM_026328, intron 2 of 5) intron (NM_026328, intron 2 of 5) 5352 NM_026328 67709 Mm.46306 NM_026328 ENSMUSG00000027876 Reg4 2010002L15Rik|GISP|RELP regenerating islet-derived family, member 4 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-33 chr18 33849590 33849780 + 1.33892459842472 NA intron (NM_013512, intron 13 of 23) intron (NM_013512, intron 13 of 23) 54793 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-8 chr10 77273882 77274087 + 1.33892459842472 NA Intergenic Intergenic 14684 NM_030262 80294 Mm.203556 NM_030262 ENSMUSG00000020260 Pofut2 2310011G23Rik|AI256847|BC003494|C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-53 chr7 110951468 110951729 + 1.33892459842472 NA intron (NM_194464, intron 1 of 20) intron (NM_194464, intron 1 of 20) -5411 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-47 chr6 39593198 39593435 + 1.33892459842472 NA intron (NR_152451, intron 1 of 3) intron (NR_152451, intron 1 of 3) 751 NR_152450 68198 Mm.29415 NM_026612 ENSMUSG00000002416 Ndufb2 1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-17 chr13 32554944 32555183 + 1.33892459842472 NA Intergenic MIR|SINE|MIR -216519 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-14 chr11 82000829 82001073 + 1.33892459842472 NA Intergenic Intergenic -32555 NM_001034013 11418 Mm.234998 NM_007384 ENSMUSG00000020704 Asic2 ACIC2|Accn1|BNC1|BNaC1|BNaC1a|Mdeg acid-sensing (proton-gated) ion channel 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-6 chr10 71150460 71150726 + 1.33892459842472 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 9097 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-46 chr3 8084532 8084756 + 1.33892459842472 NA Intergenic Intergenic -129757 NR_040587 75476 Mm.491752 NR_040587 ENSMUSG00000100010 1700010I02Rik - RIKEN cDNA 1700010I02 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-77 chr7 143649309 143649534 + 1.33892459842472 NA intron (NM_001311145, intron 1 of 5) intron (NM_001311145, intron 1 of 5) 243 NM_001311145 79202 Mm.261384 NM_023680 ENSMUSG00000010751 Tnfrsf22 2810028K06Rik|C130035G06Rik|SOBa|Tnfrh2|Tnfrsf1al2|mDcTrailr2 tumor necrosis factor receptor superfamily, member 22 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-85 chr9 13564839 13565099 + 1.33892459842472 NA Intergenic Intergenic -55020 NM_001013813 270118 Mm.116898 NM_173776 ENSMUSG00000031925 Maml2 5930431H10|BC032967 mastermind like transcriptional coactivator 2 protein-coding common_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-2 chr18 33463898 33464106 + 1.33892459842472 NA promoter-TSS (NR_045415) promoter-TSS (NR_045415) 27 NM_001109988 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-36 chr18 56614737 56614926 + 1.33892459842472 NA Intergenic Intergenic 26483 NM_026099 67343 Mm.87057 NM_026099 ENSMUSG00000032900 Tex43 1700065I17Rik|Tseg7 testis expressed 43 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-15 chr12 100445969 100446213 + 1.33892459842472 NA intron (NM_001033213, intron 5 of 19) intron (NM_001033213, intron 5 of 19) 74731 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-2 chr1 62710562 62710779 + 1.33892459842472 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 7353 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472 chr13 21717578 21717805 + 1.33892459842472 NA promoter-TSS (NM_178206) promoter-TSS (NM_178206) 63 NM_178206 319152 Mm.377874 NM_178206 ENSMUSG00000101355 Hist1h3h H3-291 histone cluster 1, H3h protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-20 chr13 91742282 91742570 + 1.33892459842472 NA promoter-TSS (NR_015501) promoter-TSS (NR_015501) -554 NR_028313 373852 Mm.466817 NR_015501 ENSMUSG00000074782 4833422C13Rik - RIKEN cDNA 4833422C13 gene ncRNA common_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-3 chr18 36521050 36521327 + 1.33892459842472 NA Intergenic Intergenic -5383 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-48 chr6 72542601 72542804 + 1.33892459842472 NA Intergenic Intergenic -1689 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-4 chr10 40018148 40018355 + 1.33892459842472 NA intron (NM_144821, intron 1 of 3) intron (NM_144821, intron 1 of 3) 7017 NM_144821 215929 Mm.55513 NM_144821 ENSMUSG00000038522 Mfsd4b1 AI317395|AI482555|Naglt1a major facilitator superfamily domain containing 4B1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-54 chr8 78717842 78718042 + 1.33892459842472 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 103210 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-58 chr4 55592559 55592797 + 1.33892459842472 NA Intergenic Intergenic -60203 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-19 chr14 69815133 69815415 + 1.33892459842472 NA Intergenic Intergenic -9729 NM_153514 246710 Mm.102367 NM_153514 ENSMUSG00000022075 Rhobtb2 Dbc2|E130206H14Rik|mKIAA0717 Rho-related BTB domain containing 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-32 chr19 53424970 53425210 + 1.33892459842472 NA Intergenic Intergenic -34456 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-25 chr17 13737397 13737705 + 1.33892459842472 NA intron (NM_022311, intron 1 of 2) intron (NM_022311, intron 1 of 2) -22990 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-22 chr15 53311149 53311396 + 1.33892459842472 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 34911 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-75 chr7 132732571 132732865 + 1.33892459842472 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 44198 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-30 chr17 31889490 31889681 + 1.33892459842472 NA Intergenic Intergenic -33781 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-84 chr9 5298563 5298782 + 1.33892459842472 NA 5' UTR (NM_009807, exon 1 of 10) 5' UTR (NM_009807, exon 1 of 10) 155 NM_009807 12362 Mm.1051 NM_009807 ENSMUSG00000025888 Casp1 ICE|Il1bc caspase 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-52 chr3 87979688 87979885 + 1.33892459842472 NA exon (NM_016701, exon 4 of 4) exon (NM_016701, exon 4 of 4) 8693 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-35 chr2 60540200 60540484 + 1.33892459842472 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 12966 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-45 chr2 152794439 152794707 + 1.33892459842472 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 33916 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-49 chr6 146529102 146529307 + 1.33892459842472 NA Intergenic Intergenic -26981 NM_019923 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-35 chr18 46742701 46742943 + 1.33892459842472 NA intron (NM_009681, intron 1 of 5) intron (NM_009681, intron 1 of 5) 946 NM_009681 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-16 chr12 116181739 116181939 + 1.33892459842472 NA Intergenic Intergenic 81186 NM_146039 217935 Mm.31382 NM_146039 ENSMUSG00000042050 Wdr60 D430033N04Rik WD repeat domain 60 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-24 chr16 93094300 93094509 + 1.33892459842472 NA Intergenic Intergenic 258785 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-16 chr13 28874380 28874674 + 1.33892459842472 NA intron (NR_045054, intron 2 of 7) intron (NR_045054, intron 2 of 7) 10895 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-26 chr15 97791989 97792206 + 1.33892459842472 NA TTS (NM_001204279) TTS (NM_001204279) 7732 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-42 chr19 47218115 47218304 + 1.33892459842472 NA intron (NM_021360, intron 1 of 5) intron (NM_021360, intron 1 of 5) -10634 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-55 chr9 15301677 15301916 + 1.33892459842472 NA promoter-TSS (NM_133732) promoter-TSS (NM_133732) -189 NM_133732 70984 Mm.261842 NM_133732 ENSMUSG00000031938 4931406C07Rik - RIKEN cDNA 4931406C07 gene protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-49 chr3 69200518 69200762 + 1.33892459842472 NA Intergenic RSINE1|SINE|B4 -21779 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-45 chr5 107902509 107902799 + 1.33892459842472 NA intron (NM_016980, intron 3 of 7) intron (NM_016980, intron 3 of 7) 2126 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-38 chr18 75381566 75381833 + 1.33892459842472 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 14334 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-15 chr12 34990811 34991039 + 1.33892459842472 NA Intergenic Intergenic 6164 NM_029294 75456 Mm.79179 NM_029294 ENSMUSG00000092305 Prps1l1 1700011K15Rik phosphoribosyl pyrophosphate synthetase 1-like 1 protein-coding common_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-4 chr2 90549577 90549816 + 1.33892459842472 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 30951 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-74 chr7 118365124 118365328 + 1.33892459842472 NA Intergenic Intergenic 78334 NM_001362180 110058 Mm.156558 NM_138649 ENSMUSG00000058420 Syt17 Bk|sytXVII synaptotagmin XVII protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-12 chr12 80345842 80346091 + 1.33892459842472 NA intron (NM_177267, intron 8 of 8) B2_Mm1a|SINE|B2 45711 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-78 chr8 22474260 22474464 + 1.33892459842472 NA intron (NM_001146117, intron 1 of 3) intron (NM_001146117, intron 1 of 3) -2338 NM_011394 20516 Mm.323901 NM_011394 ENSMUSG00000037656 Slc20a2 MolPit2|Pit-2|Pit2|Ram-1|Ram1 solute carrier family 20, member 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-67 chr6 145988998 145989205 + 1.33892459842472 NA Intergenic RLTR17B_Mm|LTR|ERVK 54979 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-34 chr2 59752659 59752869 + 1.33892459842472 NA intron (NM_001290659, intron 3 of 25) intron (NM_001290659, intron 3 of 25) 105995 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-51 chr7 67759448 67759757 + 1.33892459842472 NA exon (NM_201639, exon 1 of 4) exon (NM_201639, exon 1 of 4) 140 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-64 chr5 121384313 121384521 + 1.33892459842472 NA intron (NM_172275, intron 1 of 11) intron (NM_172275, intron 1 of 11) 992 NM_001359947 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-89 chr9 110869212 110869424 + 1.33892459842472 NA intron (NM_146260, intron 4 of 5) intron (NM_146260, intron 4 of 5) 10765 NM_146260 20776 Mm.390229 NM_146260 ENSMUSG00000049555 Tmie 5131400L21Rik|Mm.87012|sr transmembrane inner ear protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-4 chr1 193516980 193517222 + 1.33892459842472 NA Intergenic PB1D10|SINE|Alu -9571 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-60 chr4 64098177 64098398 + 1.33892459842472 NA Intergenic Intergenic -51272 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-48 chr3 27672879 27673117 + 1.33892459842472 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 37454 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-87 chr9 57987464 57987671 + 1.33892459842472 NA Intergenic Intergenic -10457 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-13 chr12 86000257 86000543 + 1.33892459842472 NA intron (NM_001347395, intron 30 of 32) intron (NM_001347395, intron 30 of 32) 78641 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-9 chr12 13212770 13213039 + 1.33892459842472 NA Intergenic URR1A|DNA|hAT-Charlie 36270 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-54 chr3 121718596 121718859 + 1.33892459842472 NA Intergenic Intergenic -4810 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-79 chr8 34049948 34050177 + 1.33892459842472 NA Intergenic Intergenic 57752 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-39 chr18 82970611 82970807 + 1.33892459842472 NA intron (NM_183033, intron 2 of 5) intron (NM_183033, intron 2 of 5) -50149 NR_033307 75853 Mm.420737 NR_033307 4930592I03Rik - RIKEN cDNA 4930592I03 gene ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-68 chr7 24316261 24316466 + 1.33892459842472 NA intron (NM_009568, intron 1 of 4) PB1D7|SINE|Alu 303 NM_009568 22756 Mm.295762 NM_009568 ENSMUSG00000074282 Zfp94 - zinc finger protein 94 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-34 chr18 38885402 38885680 + 1.33892459842472 NA intron (NM_010197, intron 1 of 3) intron (NM_010197, intron 1 of 3) -6915 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-70 chr7 45052322 45052558 + 1.33892459842472 NA intron (NM_175022, intron 1 of 13) intron (NM_175022, intron 1 of 13) 441 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-27 chr18 33889616 33889879 + 1.33892459842472 NA intron (NM_013512, intron 4 of 23) B1_Mur1|SINE|Alu 94855 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-23 chr15 39552666 39552916 + 1.33892459842472 NA intron (NM_053271, intron 19 of 26) intron (NM_053271, intron 19 of 26) -106720 NM_001256384 116838 Mm.309296 NM_053271 ENSMUSG00000037386 Rims2 2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751 regulating synaptic membrane exocytosis 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-86 chr9 52454429 52454673 + 1.33892459842472 NA Intergenic Intergenic 224886 NM_178906 330941 Mm.335160 NM_177907 ENSMUSG00000078307 AI593442 E130102D23 expressed sequence AI593442 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-7 chr10 77144468 77144788 + 1.33892459842472 NA intron (NM_009929, intron 2 of 41) MLT1E1|LTR|ERVL-MaLR 21902 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-47 chr3 19308870 19309060 + 1.33892459842472 NA intron (NM_001122759, intron 1 of 12) intron (NM_001122759, intron 1 of 12) 2357 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-38 chr3 63296660 63296872 + 1.33892459842472 NA intron (NM_001289463, intron 1 of 22) intron (NM_001289463, intron 1 of 22) 671 NM_001289463 17380 Mm.296022 NM_008604 ENSMUSG00000027820 Mme 6030454K05Rik|C85356|CALLA|CD10|NEP|SFE membrane metallo endopeptidase protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-65 chr5 149077779 149077978 + 1.33892459842472 NA Intergenic Intergenic -24821 NM_010439 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-31 chr19 34425058 34425277 + 1.33892459842472 NA Intergenic Intergenic 49968 NM_009890 12642 Mm.30824 NM_009890 ENSMUSG00000050370 Ch25h AI462618|m25OH cholesterol 25-hydroxylase protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-37 chr18 68238644 68238910 + 1.33892459842472 NA intron (NM_001357444, intron 2 of 3) intron (NM_001357444, intron 2 of 3) 10831 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-46 chr5 144909323 144909565 + 1.33892459842472 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) -12628 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-3 chr1 79469773 79469996 + 1.33892459842472 NA Intergenic L2|LINE|L2 -29794 NM_001310680 20254 Mm.5038 NM_009129 ENSMUSG00000050711 Scg2 Chgc|SgII secretogranin II protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-10 chr10 86788749 86789010 + 1.33892459842472 NA intron (NM_175331, intron 1 of 13) intron (NM_175331, intron 1 of 13) 9874 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-2 chr1 162211569 162211941 + 1.33892459842472 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -5868 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-81 chr8 60901090 60901323 + 1.33892459842472 NA intron (NM_028299, intron 5 of 7) intron (NM_028299, intron 5 of 7) 10813 NM_001357270 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-69 chr7 27542922 27543185 + 1.33892459842472 NA intron (NM_001317355, intron 2 of 13) intron (NM_001317355, intron 2 of 13) 10165 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding common_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-6 chr8 4612766 4612979 + 1.33892459842472 NA promoter-TSS (NM_145591) promoter-TSS (NM_145591) -298 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-19 chr13 45748318 45748565 + 1.33892459842472 NA intron (NM_001199304, intron 4 of 6) intron (NM_001199304, intron 4 of 6) 216550 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-55 chr3 122926573 122926841 + 1.33892459842472 NA TTS (NM_024461) TTS (NM_024461) 2310 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik|Aln RIKEN cDNA 1810037I17 gene protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-63 chr5 3301947 3302154 + 1.33892459842472 NA Intergenic Intergenic -41843 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-26 chr17 33930383 33930615 + 1.33892459842472 NA intron (NM_009059, intron 2 of 17) CpG 605 NM_009059 19732 Mm.43777 NM_009059 ENSMUSG00000041354 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 protein-coding common_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-2 chr2 12418227 12418642 + 1.33892459842472 NA intron (NM_001355537, intron 1 of 13) URR1A|DNA|hAT-Charlie 1026 NM_001355537 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Mindy3 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958|Fam188a MINDY lysine 48 deubiquitinase 3 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-10 chr12 31293204 31293427 + 1.33892459842472 NA intron (NM_008482, intron 12 of 32) intron (NM_008482, intron 12 of 32) 28021 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-72 chr7 79269245 79269497 + 1.33892459842472 NA Intergenic Intergenic -3895 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-29 chr17 29438313 29438530 + 1.33892459842472 NA Intergenic Intergenic -52624 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-58 chr9 113729394 113729687 + 1.33892459842472 NA Intergenic ID_B1|SINE|B4 -11933 NM_001286599 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-39 chr3 104356951 104357212 + 1.33892459842472 NA Intergenic Intergenic -136675 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472 chr1 58797768 58798008 + 1.33892459842472 NA intron (NM_009812, intron 1 of 8) intron (NM_009812, intron 1 of 8) 2514 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-7 chr10 91165184 91165539 + 1.33892459842472 NA intron (NM_001080129, intron 2 of 8) intron (NM_001080129, intron 2 of 8) 5189 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-43 chr4 102907589 102907802 + 1.33892459842472 NA intron (NM_144906, intron 9 of 23) intron (NM_144906, intron 9 of 23) -78684 NM_001163767 67344 Mm.111346 NM_026100 ENSMUSG00000028523 Tctex1d1 1700055O19Rik Tctex1 domain containing 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-62 chr4 135403594 135403891 + 1.33892459842472 NA Intergenic Intergenic -5515 NM_145555 230822 Mm.35548 NM_145555 ENSMUSG00000043924 Ncmap A330049M08Rik|AA545175|Mp11 noncompact myelin associated protein protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-80 chr8 54661534 54661752 + 1.33892459842472 NA intron (NM_001172152, intron 13 of 29) intron (NM_001172152, intron 13 of 29) 57035 NM_028220 244484 Mm.95281 NM_028220 ENSMUSG00000039375 Wdr17 3010002I12Rik|B230207L18Rik WD repeat domain 17 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-24 chr15 58161940 58162216 + 1.33892459842472 NA Intergenic Intergenic 20712 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-40 chr19 16272234 16272455 + 1.33892459842472 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 42660 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-66 chr6 31051667 31051904 + 1.33892459842472 NA Intergenic Intergenic 10962 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-32 chr17 62685939 62686174 + 1.33892459842472 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 195261 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-11 chr12 79527511 79527735 + 1.33892459842472 NA intron (NM_009014, intron 7 of 10) B1F|SINE|Alu 230272 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-59 chr9 119097437 119097754 + 1.33892459842472 NA Intergenic Intergenic -4093 NM_019676 18799 Mm.23963 NM_019676 ENSMUSG00000010660 Plcd1 AW212592|C79986 phospholipase C, delta 1 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-41 chr4 57640103 57640302 + 1.33892459842472 NA intron (NM_001304544, intron 2 of 8) intron (NM_001304544, intron 2 of 8) 71954 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-8 chr11 97470256 97470481 + 1.33892459842472 NA exon (NM_021493, exon 12 of 19) exon (NM_021493, exon 12 of 19) 20208 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-61 chr4 130018495 130018696 + 1.33892459842472 NA intron (NM_001199696, intron 25 of 28) intron (NM_001199696, intron 25 of 28) 26541 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-44 chr4 106633331 106633613 + 1.33892459842472 NA intron (NM_177667, intron 1 of 6) intron (NM_177667, intron 1 of 6) 11023 NM_177667 230576 Mm.41945 NM_177667 ENSMUSG00000034919 Ttc22 4732467L16Rik tetratricopeptide repeat domain 22 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-50 chr7 36094778 36095009 + 1.33892459842472 NA Intergenic Intergenic -291904 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-11 chr10 108374791 108375015 + 1.33892459842472 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 42714 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-90 chrX 95993086 95993277 + 1.33892459842472 NA Intergenic Intergenic -36207 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-29 chr18 42898760 42899019 + 1.33892459842472 NA non-coding (NR_073583, exon 1 of 9) non-coding (NR_073583, exon 1 of 9) 617 NR_073583 72930 Mm.26134 NM_027531 ENSMUSG00000024500 Ppp2r2b 2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-88 chr9 59749101 59749340 + 1.33892459842472 NA intron (NM_001172069, intron 1 of 2) intron (NM_001172069, intron 1 of 2) 1429 NM_001172069 71599 Mm.279070 NM_027838 ENSMUSG00000051705 Senp8 9130010J17Rik|AU020827|Den1|Nedp1|Prsc2 SUMO/sentrin specific peptidase 8 protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-21 chr14 47352124 47352426 + 1.33892459842472 NA Intergenic Intergenic -21585 NM_010705 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-33 chr2 30454625 30454854 + 1.33892459842472 NA Intergenic Intergenic 19460 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding unique_peak2_5_10_-1.13444601304556_2.89220861211452_1.33892459842472-5 chr10 60806119 60806353 + 1.33892459842472 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 25345 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_11_5_0.732968125297339_2.95144656336983_1.33892459842472-71 chr7 49133074 49133272 + 1.33892459842472 NA intron (NR_154465, intron 3 of 3) intron (NR_154465, intron 3 of 3) 28985 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak2_144_154_-0.388609464716335_7.08181967291607_1.33871478990297 chr18 34506383 34507605 + 1.33871478990297 NA promoter-TSS (NM_146084) promoter-TSS (NM_146084) -171 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak1_489_461_-0.219898938015856_8.74179957240813_1.33863109075503 chr2 152827166 152831973 + 1.33863109075503 NA exon (NM_001289717, exon 2 of 3) exon (NM_001289717, exon 2 of 3) -1080 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_276_181_0.306965203117219_7.66127724175731_1.3385272292785 chr15 96284553 96285782 + 1.3385272292785 NA Intergenic CpG -2355 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak2_181_188_-0.349155159338318_7.38766484455191_1.33752087579957 chr8 111536188 111538077 + 1.33752087579957 NA 5' UTR (NM_001168621, exon 1 of 5) 5' UTR (NM_001168621, exon 1 of 5) 492 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak2_781_711_-0.174254254771219_9.38860630358079_1.33721973078948 chr8 84978886 84983354 + 1.33721973078948 NA Intergenic Intergenic -2372 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-9 chr5 139200828 139201179 + 1.33403699391683 NA intron (NM_001359496, intron 1 of 20) CpG 366 NM_001359494 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-3 chr11 59202552 59202865 + 1.33403699391683 NA promoter-TSS (NR_037964) promoter-TSS (NR_037964) 222 NM_001302336 67212 Mm.282694 NM_026035 ENSMUSG00000036860 Mrpl55 2810038N09Rik|L55mt|MRP-L55 mitochondrial ribosomal protein L55 protein-coding unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-5 chr7 112135173 112135993 + 1.33403699391683 NA intron (NM_001360261, intron 3 of 6) intron (NM_001360261, intron 3 of 6) 23113 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-6 chr2 29632570 29633045 + 1.33403699391683 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 13087 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-5 chr3 106547951 106548274 + 1.33403699391683 NA promoter-TSS (NM_133869) promoter-TSS (NM_133869) -310 NM_133869 99712 Mm.429443 NM_133869 ENSMUSG00000040774 Cept1 9930118K05Rik|mCEPT1 choline/ethanolaminephosphotransferase 1 protein-coding common_peak1_16_28_-1.04109515821788_4.33743341601863_1.33403699391683 chr17 84086709 84086911 + 1.33403699391683 NA non-coding (NR_045458, exon 4 of 6) non-coding (NR_045458, exon 4 of 6) 8150 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683 chr15 53125354 53125725 + 1.33403699391683 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 220644 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-2 chr16 23285020 23285463 + 1.33403699391683 NA intron (NM_001252505, intron 2 of 7) intron (NM_001252505, intron 2 of 7) -5229 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-6 chr8 122227653 122228097 + 1.33403699391683 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -54266 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-7 chr9 98361447 98361965 + 1.33403699391683 NA intron (NM_001357446, intron 2 of 3) intron (NM_001357446, intron 2 of 3) -61255 NM_011254 19659 Mm.279741 NM_011254 ENSMUSG00000046402 Rbp1 CRBPI|Crbp|Rbp-1 retinol binding protein 1, cellular protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-4 chr2 30929319 30929816 + 1.33403699391683 NA Intergenic Intergenic -23434 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding common_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-3 chr16 23314683 23315232 + 1.33403699391683 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 24487 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-10 chr8 34612756 34613056 + 1.33403699391683 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 27410 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-10 chr7 34629945 34630587 + 1.33403699391683 NA Intergenic Intergenic 22666 NM_146188 233107 Mm.76761 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-5 chrX 159810274 159810680 + 1.33403699391683 NA intron (NM_021389, intron 3 of 16) intron (NM_021389, intron 3 of 16) -29991 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-3 chr18 60728176 60728448 + 1.33403699391683 NA promoter-TSS (NM_001348103) promoter-TSS (NM_001348103) -746 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-2 chr15 83417777 83418076 + 1.33403699391683 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 14924 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-4 chr8 61621263 61621621 + 1.33403699391683 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -30273 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-8 chr5 64235612 64235902 + 1.33403699391683 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 5400 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-5 chr18 60619438 60619880 + 1.33403699391683 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 4646 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-6 chr3 142395853 142396258 + 1.33403699391683 NA promoter-TSS (NM_001190855) promoter-TSS (NM_001190855) -359 NM_019808 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak2_33_14_0.902940261727933_4.35836072647249_1.33403699391683 chr11 75495673 75496009 + 1.33403699391683 NA intron (NM_138659, intron 20 of 41) intron (NM_138659, intron 20 of 41) 9064 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding common_peak2_33_14_0.902940261727933_4.35836072647249_1.33403699391683-5 chr9 119341582 119341837 + 1.33403699391683 NA intron (NM_001357516, intron 1 of 10) CpG 415 NM_001357516 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-2 chr11 50025439 50025950 + 1.33403699391683 NA intron (NM_001290750, intron 1 of 7) CpG 363 NM_001290750 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683 chr18 62549076 62549714 + 1.33403699391683 NA promoter-TSS (NM_001361088) promoter-TSS (NM_001361088) 484 NM_177829 328971 Mm.312675 NM_177829 ENSMUSG00000044176 Spink10 A230091H23Rik serine peptidase inhibitor, Kazal type 10 protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683 chr10 121173563 121173966 + 1.33403699391683 NA Intergenic Intergenic 28885 NR_152796 74647 Mm.370609 NR_152796 ENSMUSG00000112846 4930432O09Rik - RIKEN cDNA 4930432O09 gene ncRNA common_peak2_33_14_0.902940261727933_4.35836072647249_1.33403699391683-3 chr18 42061330 42061719 + 1.33403699391683 NA intron (NM_172966, intron 1 of 7) intron (NM_172966, intron 1 of 7) 7814 NM_001146299 269016 Mm.45472 NM_172966 ENSMUSG00000057719 Sh3rf2 2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158 SH3 domain containing ring finger 2 protein-coding unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-2 chr2 13555394 13555826 + 1.33403699391683 NA Intergenic Intergenic -10946 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-7 chr2 138256617 138256913 + 1.33403699391683 NA intron (NM_001025431, intron 1 of 4) CpG 181 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-8 chr7 109588101 109588414 + 1.33403699391683 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 28311 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-3 chr2 137080281 137080930 + 1.33403699391683 NA TTS (NM_013822) TTS (NM_013822) 35915 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-4 chr15 27771903 27772244 + 1.33403699391683 NA intron (NM_001081302, intron 36 of 56) intron (NM_001081302, intron 36 of 56) -90531 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-7 chr4 43405269 43405906 + 1.33403699391683 NA promoter-TSS (NM_199057) promoter-TSS (NM_199057) -915 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-9 chr7 111978481 111978940 + 1.33403699391683 NA Intergenic Intergenic -44796 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_33_14_0.902940261727933_4.35836072647249_1.33403699391683-11 chr9 121718530 121718934 + 1.33403699391683 NA promoter-TSS (NM_010918) promoter-TSS (NM_010918) -449 NM_010918 18087 Mm.32842 NM_010918 ENSMUSG00000032525 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence protein-coding common_peak2_33_14_0.902940261727933_4.35836072647249_1.33403699391683-4 chr3 113953646 113953908 + 1.33403699391683 NA Intergenic Intergenic -76763 NM_007729 12814 Mm.209715 NM_007729 ENSMUSG00000027966 Col11a1 C530001D20Rik|cho collagen, type XI, alpha 1 protein-coding common_peak2_33_14_0.902940261727933_4.35836072647249_1.33403699391683-2 chr14 45657123 45657443 + 1.33403699391683 NA TTS (NR_039593) TTS (NR_039593) 770 NR_039593 100628600 NR_039593 ENSMUSG00000093167 Mir5131 mmu-mir-5131|mu-mir-5131 microRNA 5131 ncRNA unique_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683-4 chr5 32198243 32198700 + 1.33403699391683 NA Intergenic Intergenic -34237 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak2_16_28_-1.04109515821788_4.33743341601863_1.33403699391683 chr1 40233028 40233414 + 1.33403699391683 NA intron (NM_008362, intron 1 of 10) intron (NM_008362, intron 1 of 10) 8141 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_97_110_-0.468112702557296_6.56035951507146_1.33393931754316 chr16 38087282 38088768 + 1.33393931754316 NA promoter-TSS (NM_019827) promoter-TSS (NM_019827) -976 NM_001347232 56637 Mm.394930 NM_019827 ENSMUSG00000022812 Gsk3b 7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3 glycogen synthase kinase 3 beta protein-coding common_peak2_127_139_-0.420407911446903_6.91907906122151_1.33316494868808 chr11 103131976 103132909 + 1.33316494868808 NA promoter-TSS (NM_027658) promoter-TSS (NM_027658) -897 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak2_128_139_-0.409259864081323_6.92465308490431_1.33316494868808 chr7 110061715 110062671 + 1.33316494868808 NA intron (NM_009281, intron 1 of 15) CpG 491 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak2_142_86_0.424675057412405_6.65528102455493_1.33303605031766 chr19 4171060 4171797 + 1.33303605031766 NA exon (NM_134148, exon 5 of 10) exon (NM_134148, exon 5 of 10) 4051 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding common_peak2_59_73_-0.585975800003065_5.91646546562742_1.33296683454087-4 chr2 29715855 29716819 + 1.33296683454087 NA intron (NM_001039086, intron 11 of 25) intron (NM_001039086, intron 11 of 25) -45191 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding common_peak2_59_73_-0.585975800003065_5.91646546562742_1.33296683454087-3 chr18 88893694 88894381 + 1.33296683454087 NA intron (NM_018821, intron 1 of 2) CpG 170 NM_018821 54607 Mm.91920 NM_018821 ENSMUSG00000056153 Socs6 1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4 suppressor of cytokine signaling 6 protein-coding common_peak2_59_73_-0.585975800003065_5.91646546562742_1.33296683454087-2 chr17 29346786 29347700 + 1.33296683454087 NA promoter-TSS (NM_001357762) promoter-TSS (NM_001357762) 84 NM_001357762 56462 Mm.3224 NM_019880 ENSMUSG00000024012 Mtch1 2310034O17Rik|AI255158|AU018396|C77849|PSAP mitochondrial carrier 1 protein-coding common_peak1_59_73_-0.585975800003065_5.91646546562742_1.33296683454087-2 chr9 120127777 120128490 + 1.33296683454087 NA intron (NM_011029, intron 1 of 6) CpG 367 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding common_peak1_59_73_-0.585975800003065_5.91646546562742_1.33296683454087 chr15 58378474 58379014 + 1.33296683454087 NA intron (NM_027211, intron 1 of 8) intron (NM_027211, intron 1 of 8) 10530 NM_027211 69787 Mm.237985 NM_027211 Anxa13 1810034H17Rik|AV055219 annexin A13 protein-coding common_peak2_59_73_-0.585975800003065_5.91646546562742_1.33296683454087 chr1 64305124 64305599 + 1.33296683454087 NA Intergenic Intergenic -183972 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_88_49_0.544451036625203_5.91608170808733_1.33296683454086 chr16 4912353 4913111 + 1.33296683454086 NA intron (NM_001357062, intron 4 of 17) intron (NM_001357062, intron 4 of 17) -26379 NM_001316715 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding common_peak2_201_207_-0.337996798456923_7.53144131891263_1.33292705147562 chr1 132291158 132292557 + 1.33292705147562 NA Intergenic Intergenic -6769 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_199_126_0.359504216233654_7.16843679488899_1.33249038857025 chr5 105731486 105733725 + 1.33249038857025 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 31795 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_118_69_0.475151910392372_6.36685897214115_1.33151214593207 chr8 88199161 88200526 + 1.33151214593207 NA intron (NM_001164498, intron 1 of 12) CpG 630 NM_001164498 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding common_peak2_331_323_-0.265636341140194_8.20703183231453_1.33101529527008 chr19 28293995 28296175 + 1.33101529527008 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -283919 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734-3 chr2 130664078 130664620 + 1.32967515660734 NA intron (NM_029832, intron 1 of 8) CpG 296 NM_029832 77006 Mm.440063 NM_029832 ENSMUSG00000068290 Ddrgk1 1110001I20Rik|2600009E05Rik|AI326138|Ufbp1 DDRGK domain containing 1 protein-coding common_peak1_58_29_0.692510489714161_5.2531458404656_1.32967515660734-2 chr5 125134962 125135530 + 1.32967515660734 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 43968 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734 chr1 88561083 88561954 + 1.32967515660734 NA non-coding (NR_037971, exon 6 of 6) non-coding (NR_037971, exon 6 of 6) 10001 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak1_57_29_0.668022425768748_5.24090180849289_1.32967515660734-3 chr4 129461918 129462963 + 1.32967515660734 NA intron (NM_133889, intron 2 of 10) intron (NM_133889, intron 2 of 10) 761 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding common_peak2_58_29_0.692510489714161_5.2531458404656_1.32967515660734 chr5 121837306 121838007 + 1.32967515660734 NA promoter-TSS (NM_008507) promoter-TSS (NM_008507) -797 NM_008507 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak1_57_29_0.668022425768748_5.24090180849289_1.32967515660734-4 chr8 72475337 72475676 + 1.32967515660734 NA promoter-TSS (NM_138585) promoter-TSS (NM_138585) -273 NM_138585 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734-5 chr8 94786897 94787684 + 1.32967515660734 NA Intergenic B3|SINE|B2 15110 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding unique_peak1_58_29_0.692510489714161_5.2531458404656_1.32967515660734-2 chr9 47545672 47546235 + 1.32967515660734 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 15601 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734-6 chrX 12855342 12856359 + 1.32967515660734 NA Intergenic Intergenic -81023 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding common_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734-4 chr6 128034666 128035395 + 1.32967515660734 NA intron (NM_001356301, intron 1 of 7) CpG 108548 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak1_57_29_0.668022425768748_5.24090180849289_1.32967515660734-2 chr3 113952639 113953039 + 1.32967515660734 NA Intergenic Intergenic -77701 NM_007729 12814 Mm.209715 NM_007729 ENSMUSG00000027966 Col11a1 C530001D20Rik|cho collagen, type XI, alpha 1 protein-coding unique_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734 chr2 72475915 72476573 + 1.32967515660734 NA promoter-TSS (NM_025866) promoter-TSS (NM_025866) 25 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding common_peak1_58_29_0.692510489714161_5.2531458404656_1.32967515660734 chr14 118938019 118938561 + 1.32967515660734 NA intron (NM_008929, intron 1 of 11) CpG 358 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak1_57_29_0.668022425768748_5.24090180849289_1.32967515660734 chr14 121251858 121252518 + 1.32967515660734 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 3482 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_58_29_0.692510489714161_5.2531458404656_1.32967515660734 chr3 94582060 94582700 + 1.32967515660734 NA exon (NM_029721, exon 1 of 12) exon (NM_029721, exon 1 of 12) 336 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding common_peak2_34_48_-0.763353851569405_5.23303291833051_1.32967515660734-2 chr1 160044282 160044997 + 1.32967515660734 NA non-coding (NR_028111, exon 1 of 3) non-coding (NR_028111, exon 1 of 3) 259 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-6 chr2 90500289 90500480 + 1.32905871926422 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -21210 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422 chr1 45817277 45817486 + 1.32905871926422 NA exon (NM_028599, exon 14 of 21) exon (NM_028599, exon 14 of 21) 22215 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-11 chr7 66362189 66362387 + 1.32905871926422 NA intron (NM_146191, intron 2 of 33) (TCTCTG)n|Simple_repeat|Simple_repeat 19436 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422-6 chr3 9502132 9502376 + 1.32905871926422 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 99176 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-7 chr4 128852368 128852569 + 1.32905871926422 NA Intergenic MTEa|LTR|ERVL-MaLR -31672 NM_178110 67525 Mm.30653 NM_178110 ENSMUSG00000041000 Trim62 6330414G21Rik|AI450348|Dear1 tripartite motif-containing 62 protein-coding unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422-2 chr13 6195384 6195586 + 1.32905871926422 NA Intergenic RSINE1|SINE|B4 333996 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-4 chr17 5819544 5819809 + 1.32905871926422 NA Intergenic MER20B|DNA|hAT-Charlie 20186 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-5 chr17 30140253 30140533 + 1.32905871926422 NA intron (NR_151442, intron 2 of 3) intron (NR_151442, intron 2 of 3) 135354 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422 chr13 75760802 75761003 + 1.32905871926422 NA intron (NM_138953, intron 5 of 11) intron (NM_138953, intron 5 of 11) 53418 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-8 chr4 129986180 129986371 + 1.32905871926422 NA intron (NM_001199696, intron 1 of 28) CpG 1197 NM_173071 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-9 chr5 13975395 13975590 + 1.32905871926422 NA Intergenic B1_Mm|SINE|Alu -49784 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422-5 chr15 74567005 74567263 + 1.32905871926422 NA intron (NM_001359759, intron 18 of 30) intron (NM_001359759, intron 18 of 30) 50938 NM_001359759 107831 Mm.43133 NM_174991 ENSMUSG00000034730 Adgrb1 B830018M07Rik|Bai1|R75078|mKIAA4089 adhesion G protein-coupled receptor B1 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-2 chr14 70212360 70212552 + 1.32905871926422 NA Intergenic Intergenic -4785 NM_011366 20410 Mm.5068 NM_011366 ENSMUSG00000022091 Sorbs3 SCAM-1|SH3P3|Sh3d4|vinexin-g sorbin and SH3 domain containing 3 protein-coding unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-3 chr15 53623044 53623255 + 1.32905871926422 NA intron (NM_177225, intron 4 of 4) intron (NM_177225, intron 4 of 4) -8870 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422-7 chr6 83421819 83422040 + 1.32905871926422 NA intron (NM_001347313, intron 3 of 11) intron (NM_001347313, intron 3 of 11) 19749 NM_183138 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422-3 chr13 73389589 73389791 + 1.32905871926422 NA Intergenic Intergenic -42306 NR_045293 432777 Mm.415319 NR_045293 ENSMUSG00000113346 Eprn AU019512|D630045M09Rik ephemeron, early developmental lncRNA ncRNA unique_peak1_5_1_1.32498560559174_1.66249280279587_1.32905871926422-10 chr5 113595344 113595548 + 1.32905871926422 NA Intergenic ID_B1|SINE|B4 45026 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding unique_peak2_0_5_-2.82670253821038_1.17161123161596_1.32905871926422-4 chr14 11822694 11822917 + 1.32905871926422 NA intron (NM_008981, intron 2 of 29) (GA)n|Simple_repeat|Simple_repeat 269252 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak2_120_132_-0.426971674524865_6.84179659823876_1.32823482328799 chr13 45963896 45964956 + 1.32823482328799 NA intron (NM_001199304, intron 1 of 6) CpG 565 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_95_54_0.515405973774103_6.03906270041171_1.32755441273623-3 chr6 149187894 149188745 + 1.32755441273623 NA non-coding (NR_153963, exon 1 of 5) non-coding (NR_153963, exon 1 of 5) 393 NM_001356344 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak1_95_54_0.515405973774103_6.03906270041171_1.32755441273623 chr1 92473038 92474186 + 1.32755441273623 NA intron (NM_024197, intron 1 of 9) CpG 146 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak1_95_54_0.515405973774103_6.03906270041171_1.32755441273623-2 chr11 103263610 103264800 + 1.32755441273623 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 3196 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_110_64_0.482373550683199_6.26355458837005_1.32755114337413 chr7 100943545 100944861 + 1.32755114337413 NA intron (NM_183168, intron 1 of 2) intron (NM_183168, intron 1 of 2) -12042 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak2_71_85_-0.541608485602637_6.15546051190078_1.32602788216271 chr1 132338503 132339727 + 1.32602788216271 NA Intergenic MIRc|SINE|MIR 22990 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_103_59_0.504537619700105_6.15915940545857_1.32602788216269 chr11 72689919 72690850 + 1.32602788216269 NA intron (NM_009671, intron 1 of 24) intron (NM_009671, intron 1 of 24) 382 NM_009671 11736 Mm.10313 NM_009671 ENSMUSG00000020790 Ankfy1 Ankhzn|ZFYVE14|mKIAA1255 ankyrin repeat and FYVE domain containing 1 protein-coding common_peak1_103_59_0.504537619700105_6.15915940545857_1.32602788216269 chr1 184707872 184708693 + 1.32602788216269 NA Intergenic Intergenic -4215 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA common_peak1_103_59_0.504537619700105_6.15915940545857_1.32602788216269-3 chr10 118867811 118869102 + 1.32602788216269 NA intron (NM_001014390, intron 1 of 2) CpG-1533 447 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_103_59_0.504537619700105_6.15915940545857_1.32602788216269-2 chr10 8885660 8886649 + 1.32602788216269 NA promoter-TSS (NM_175155) promoter-TSS (NM_175155) -84 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-19 chr15 51844672 51844997 + 1.32595962126035 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 20627 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-55 chr6 91731746 91732040 + 1.32595962126035 NA intron (NM_009320, intron 5 of 14) intron (NM_009320, intron 5 of 14) 47826 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-37 chr2 32694462 32694651 + 1.32595962126035 NA promoter-TSS (NM_010236) promoter-TSS (NM_010236) -381 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-63 chr7 89579698 89579891 + 1.32595962126035 NA Intergenic Intergenic -52607 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-26 chr5 24409386 24409607 + 1.32595962126035 NA 3' UTR (NM_029020, exon 16 of 16) 3' UTR (NM_029020, exon 16 of 16) -3955 NM_183000 171209 Mm.299636 NM_183000 ENSMUSG00000038276 Asic3 AW742291|Accn3|DRASIC|SLNAC1|TNAC1 acid-sensing (proton-gated) ion channel 3 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-15 chr15 37613176 37613474 + 1.32595962126035 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 67249 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-52 chr6 51171698 51171953 + 1.32595962126035 NA Intergenic Intergenic 98085 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-30 chr7 6779730 6779941 + 1.32595962126035 NA intron (NM_001360502, intron 2 of 7) intron (NM_001360502, intron 2 of 7) -23752 NR_037213 100499513 NR_037213 ENSMUSG00000092815 Mir3099 mir-3099|mmu-mir-3099 microRNA 3099 ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-7 chr10 96697516 96697717 + 1.32595962126035 NA Intergenic Intergenic 80615 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-9 chr11 78301738 78301942 + 1.32595962126035 NA intron (NM_017407, intron 1 of 23) CpG 249 NM_017407 54141 Mm.24250 NM_017407 ENSMUSG00000002055 Spag5 AI874642|D11Bhm180e|Deepest|MAP126|Mastrin|S17 sperm associated antigen 5 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-26 chr17 43458998 43459236 + 1.32595962126035 NA 3' UTR (NM_001081178, exon 21 of 21) 3' UTR (NM_001081178, exon 21 of 21) 43656 NM_008585 17287 Mm.5346 NM_008585 ENSMUSG00000023914 Mep1a AI098089|AW107200|Mep-1|Mep-1a|Mep1 meprin 1 alpha protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-56 chr6 108713767 108713983 + 1.32595962126035 NA Intergenic Intergenic -52941 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-16 chr13 34177668 34177947 + 1.32595962126035 NA intron (NM_001101430, intron 2 of 2) intron (NM_001101430, intron 2 of 2) 14843 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak2_12_6_0.625238231970754_3.11997403804298_1.32595962126035 chr1 162093220 162093421 + 1.32595962126035 NA intron (NM_001038619, intron 15 of 20) RLTR51A_Mm|LTR|ERVK? 88351 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA common_peak2_12_6_0.625238231970754_3.11997403804298_1.32595962126035-3 chr7 44818746 44818966 + 1.32595962126035 NA intron (NM_001171024, intron 1 of 8) intron (NM_001171024, intron 1 of 8) -2198 NR_033136 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-60 chr7 82071293 82071512 + 1.32595962126035 NA non-coding (NR_045744, exon 2 of 4) non-coding (NR_045744, exon 2 of 4) 1015 NR_045744 434205 Mm.333986 NR_045744 ENSMUSG00000109145 Gm20744 - predicted gene, 20744 ncRNA common_peak1_6_11_-1.03915344778274_3.06538577682978_1.32595962126035 chr6 43248046 43248263 + 1.32595962126035 NA Intergenic B4A|SINE|B4 12544 NM_146370 18346 Mm.222840 NM_146370 ENSMUSG00000061210 Olfr47 IB12|MOR261-9|Olfr13 olfactory receptor 47 protein-coding common_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035 chr15 41614018 41614243 + 1.32595962126035 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 165027 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-22 chr16 8795662 8795946 + 1.32595962126035 NA Intergenic Intergenic -34296 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-4 chr1 183930625 183930859 + 1.32595962126035 NA Intergenic Intergenic 103256 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-4 chr5 65437834 65438037 + 1.32595962126035 NA Intergenic Intergenic -2093 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-11 chr11 118193771 118194004 + 1.32595962126035 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 18855 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-64 chr7 99323911 99324194 + 1.32595962126035 NA intron (NM_010837, intron 3 of 3) intron (NM_010837, intron 3 of 3) 29187 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-74 chr9 63997883 63998261 + 1.32595962126035 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 23987 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-20 chr15 98973267 98973464 + 1.32595962126035 NA Intergenic Intergenic -12600 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-14 chr13 97257281 97257555 + 1.32595962126035 NA Intergenic Intergenic 16313 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-49 chr5 66620597 66620815 + 1.32595962126035 NA Intergenic Intergenic -1889 NM_001310626 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-57 chr6 114644333 114644552 + 1.32595962126035 NA intron (NM_028835, intron 1 of 18) intron (NM_028835, intron 1 of 18) 1345 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-35 chr9 107627056 107627278 + 1.32595962126035 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 8175 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-42 chr3 7502202 7502481 + 1.32595962126035 NA Intergenic Intergenic -1085 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-41 chr2 151525987 151526420 + 1.32595962126035 NA Intergenic Intergenic -16280 NR_126058 14225 Mm.278458 NM_008019 ENSMUSG00000032966 Fkbp1a FKBP12|Fkbp|Fkbp1 FK506 binding protein 1a protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-59 chr7 5052772 5052975 + 1.32595962126035 NA exon (NM_026900, exon 2 of 2) exon (NM_026900, exon 2 of 2) 1341 NM_026900 68992 Mm.41484 NM_026900 ENSMUSG00000055633 Zfp580 1500015O20Rik|AI838225|Znf580 zinc finger protein 580 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-75 chr9 71290389 71290604 + 1.32595962126035 NA intron (NM_009022, intron 12 of 13) intron (NM_009022, intron 12 of 13) 74707 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-6 chr11 40751158 40751367 + 1.32595962126035 NA exon (NM_009831, exon 5 of 6) exon (NM_009831, exon 5 of 6) 4024 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035 chr1 10932993 10933236 + 1.32595962126035 NA Intergenic RMER13A2|LTR|ERVK -60351 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-24 chr4 124709283 124709497 + 1.32595962126035 NA TTS (NM_010213) TTS (NM_010213) -5471 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-50 chr5 112293558 112293836 + 1.32595962126035 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 17006 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-5 chr10 68135391 68135602 + 1.32595962126035 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 143230 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-2 chr12 111668107 111668320 + 1.32595962126035 NA Intergenic Intergenic 4125 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-28 chr5 151074058 151074291 + 1.32595962126035 NA intron (NR_153382, intron 3 of 13) intron (NR_153382, intron 3 of 13) 116019 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-28 chr17 78339229 78339460 + 1.32595962126035 NA intron (NM_015800, intron 8 of 16) intron (NM_015800, intron 8 of 16) 78808 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-31 chr7 127564624 127564838 + 1.32595962126035 NA intron (NM_001304267, intron 2 of 2) intron (NM_001304267, intron 2 of 2) 3508 NM_001304267 105180375 Mm.428042 NM_001304267 ENSMUSG00000106715 Tmem265 - transmembrane protein 265 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-69 chr8 64659699 64659927 + 1.32595962126035 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 33296 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-62 chr7 84502530 84502763 + 1.32595962126035 NA Intergenic Intergenic -26308 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-39 chr2 83727081 83727509 + 1.32595962126035 NA intron (NM_008402, intron 1 of 29) B1_Mur4|SINE|Alu 2898 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035 chr1 36009345 36009606 + 1.32595962126035 NA Intergenic Intergenic -58925 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-33 chr8 35602115 35602343 + 1.32595962126035 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -13209 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-14 chr12 49975625 49975829 + 1.32595962126035 NA Intergenic Intergenic -494865 NR_045472 69054 Mm.417838 NR_045472 ENSMUSG00000100844 1810007C17Rik - RIKEN cDNA 1810007C17 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-58 chr6 145113106 145113364 + 1.32595962126035 NA Intergenic Intergenic -2401 NM_001281980 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-32 chr8 13373621 13373835 + 1.32595962126035 NA intron (NM_001358991, intron 11 of 12) intron (NM_001358991, intron 11 of 12) 23050 NM_009724 11945 Mm.154039 NM_009724 ENSMUSG00000031449 Atp4b AV080843 ATPase, H+/K+ exchanging, beta polypeptide protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-51 chr5 143642787 143643031 + 1.32595962126035 NA intron (NM_011182, intron 1 of 12) intron (NM_011182, intron 1 of 12) -8332 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-7 chr11 72135089 72135327 + 1.32595962126035 NA intron (NM_001024927, intron 1 of 19) intron (NM_001024927, intron 1 of 19) 681 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-47 chr4 130103527 130103739 + 1.32595962126035 NA Intergenic Intergenic -3923 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-20 chr19 28791432 28791647 + 1.32595962126035 NA Intergenic Intergenic -43627 NM_009199 20510 Mm.246670 NM_009199 ENSMUSG00000024935 Slc1a1 D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-17 chr16 55894964 55895181 + 1.32595962126035 NA 5' UTR (NM_001134457, exon 1 of 6) 5' UTR (NM_001134457, exon 1 of 6) 207 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-2 chr7 139783264 139783468 + 1.32595962126035 NA Intergenic Intergenic 4348 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-35 chr19 10563009 10563208 + 1.32595962126035 NA Intergenic L1MEf|LINE|L1 -6870 NM_026798 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-3 chr1 162184873 162185122 + 1.32595962126035 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -32626 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-44 chr3 65320507 65320770 + 1.32595962126035 NA intron (NM_001357358, intron 8 of 13) intron (NM_001357358, intron 8 of 13) -17953 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-12 chr12 8333523 8333710 + 1.32595962126035 NA intron (NM_021429, intron 4 of 6) intron (NM_021429, intron 4 of 6) 20183 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-38 chr2 68955286 68955535 + 1.32595962126035 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 93969 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-6 chr10 93354126 93354423 + 1.32595962126035 NA Intergenic MIRb|SINE|MIR 18063 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-10 chr12 84827353 84827582 + 1.32595962126035 NA intron (NM_013589, intron 8 of 34) MIR|SINE|MIR -48335 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-33 chr18 80277347 80277552 + 1.32595962126035 NA intron (NM_025861, intron 4 of 5) intron (NM_025861, intron 4 of 5) 21143 NM_025861 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-67 chr8 11559056 11559279 + 1.32595962126035 NA intron (NM_001302459, intron 1 of 1) intron (NM_001302459, intron 1 of 1) 757 NM_001302459 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-8 chr11 76026780 76027001 + 1.32595962126035 NA intron (NM_029658, intron 1 of 2) intron (NM_029658, intron 1 of 2) 892 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-25 chr17 35838781 35838982 + 1.32595962126035 NA promoter-TSS (NM_011655) promoter-TSS (NM_011655) -580 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035 chr12 35531680 35531891 + 1.32595962126035 NA intron (NM_001314027, intron 1 of 9) intron (NM_001314027, intron 1 of 9) 3204 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-36 chrX 143343817 143344025 + 1.32595962126035 NA intron (NM_001358592, intron 4 of 11) intron (NM_001358592, intron 4 of 11) 50341 NM_001358592 83453 Mm.157697 NM_031258 ENSMUSG00000031283 Chrdl1 CHL|CHL1|Nrln1|VOPT chordin-like 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-34 chr18 83820178 83820434 + 1.32595962126035 NA Intergenic Intergenic 266256 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-3 chr1 189756454 189756702 + 1.32595962126035 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 28310 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-11 chr12 104801663 104801913 + 1.32595962126035 NA intron (NM_001040682, intron 2 of 12) intron (NM_001040682, intron 2 of 12) -49836 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-48 chr5 13987951 13988179 + 1.32595962126035 NA Intergenic Intergenic -37211 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-25 chr4 139116772 139117070 + 1.32595962126035 NA intron (NM_001163006, intron 1 of 3) intron (NM_001163006, intron 1 of 3) 14116 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak2_12_6_0.625238231970754_3.11997403804298_1.32595962126035-2 chr11 19978991 19979225 + 1.32595962126035 NA intron (NM_033523, intron 1 of 5) PB1D10|SINE|Alu 54666 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-5 chr10 17796512 17796754 + 1.32595962126035 NA intron (NM_138628, intron 1 of 9) intron (NM_138628, intron 1 of 9) 414 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-36 chr19 27350652 27350873 + 1.32595962126035 NA Intergenic Intergenic 28143 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-18 chr14 76557585 76557808 + 1.32595962126035 NA promoter-TSS (NR_027699) promoter-TSS (NR_027699) -807 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-32 chr18 57464883 57465186 + 1.32595962126035 NA Intergenic Intergenic -3452 NM_001134697 629147 Mm.57415 NM_001134697 ENSMUSG00000069372 Ctxn3 - cortexin 3 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-45 chr3 145102474 145102672 + 1.32595962126035 NA Intergenic Intergenic -3467 NM_178697 229933 Mm.331420 NM_178697 ENSMUSG00000036960 Clca2 4732440A06|AI586120|Clca5 chloride channel accessory 2 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-18 chr17 27073836 27074044 + 1.32595962126035 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) 16636 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-53 chr6 51211766 51211981 + 1.32595962126035 NA Intergenic Intergenic 58037 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-29 chr6 127266241 127266460 + 1.32595962126035 NA Intergenic Intergenic 41617 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-27 chr17 43592042 43592279 + 1.32595962126035 NA promoter-TSS (NR_045444) promoter-TSS (NR_045444) -651 NR_045444 73504 Mm.9277 NR_045444 ENSMUSG00000090307 1700071M16Rik - RIKEN cDNA 1700071M16 gene ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-22 chr4 11555423 11555670 + 1.32595962126035 NA Intergenic B1_Mus1|SINE|Alu -3374 NM_001039556 623474 Mm.491200 NM_177285 ENSMUSG00000078773 Rad54b E130016E03Rik RAD54 homolog B (S. cerevisiae) protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-15 chr12 85961313 85961544 + 1.32595962126035 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 117613 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-34 chr9 58457147 58457349 + 1.32595962126035 NA intron (NR_040736, intron 1 of 2) intron (NR_040736, intron 1 of 2) 2075 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-19 chr18 68098477 68098713 + 1.32595962126035 NA intron (NM_172631, intron 2 of 5) intron (NM_172631, intron 2 of 5) -129351 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-61 chr7 84364170 84364384 + 1.32595962126035 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 45761 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-68 chr8 31812081 31812352 + 1.32595962126035 NA Intergenic Intergenic 105987 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-70 chr8 70871852 70872099 + 1.32595962126035 NA intron (NM_026964, intron 1 of 4) intron (NM_026964, intron 1 of 4) 1515 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-3 chr4 11675293 11675486 + 1.32595962126035 NA Intergenic Intergenic -29058 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-13 chr13 59945911 59946205 + 1.32595962126035 NA Intergenic Intergenic -83653 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-72 chr8 126879950 126880258 + 1.32595962126035 NA Intergenic Intergenic 31084 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-31 chr18 36495546 36495944 + 1.32595962126035 NA Intergenic B3|SINE|B2 20060 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-23 chr16 18876337 18876536 + 1.32595962126035 NA promoter-TSS (NM_010435) promoter-TSS (NM_010435) 201 NM_010922 18100 Mm.20918 NM_010922 ENSMUSG00000022706 Mrpl40 Nlvcf mitochondrial ribosomal protein L40 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-65 chr7 99553724 99553987 + 1.32595962126035 NA intron (NM_178220, intron 1 of 14) intron (NM_178220, intron 1 of 14) 1586 NR_029760 723840 NR_029760 ENSMUSG00000065571 Mir326 Mirn326|mir-326|mmu-mir-326 microRNA 326 ncRNA unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-21 chr2 114086124 114086344 + 1.32595962126035 NA Intergenic Intergenic 31838 NR_028422 100303644 Mm.330469 NR_028422 ENSMUSG00000092397 C130080G10Rik - RIKEN cDNA C130080G10 gene ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-46 chr4 123584852 123585109 + 1.32595962126035 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -31440 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-2 chr1 121361037 121361265 + 1.32595962126035 NA Intergenic Intergenic -28562 NM_178082 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-9 chr12 40474070 40474345 + 1.32595962126035 NA intron (NM_172803, intron 1 of 52) intron (NM_172803, intron 1 of 52) 28154 NM_172803 238130 Mm.341423 NM_172803 ENSMUSG00000035954 Dock4 5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716 dedicator of cytokinesis 4 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-2 chr1 79759245 79759444 + 1.32595962126035 NA intron (NM_027057, intron 1 of 4) intron (NM_027057, intron 1 of 4) 2425 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-10 chr11 86609880 86610193 + 1.32595962126035 NA intron (NM_001356531, intron 8 of 11) B1_Mur4|SINE|Alu -25878 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-71 chr8 109607880 109608114 + 1.32595962126035 NA intron (NM_020046, intron 1 of 8) intron (NM_020046, intron 1 of 8) 676 NM_020046 56749 Mm.23894 NM_020046 ENSMUSG00000031730 Dhodh 2810417D19Rik|AI834883 dihydroorotate dehydrogenase protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-54 chr6 89354340 89354697 + 1.32595962126035 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 8095 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-21 chr15 99384535 99384815 + 1.32595962126035 NA Intergenic Intergenic -8272 NM_026669 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-43 chr3 37653568 37653781 + 1.32595962126035 NA Intergenic Intergenic 13727 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-30 chr18 9551985 9552223 + 1.32595962126035 NA Intergenic Intergenic 67365 NM_007593 26369 Mm.195831 NM_007593 ENSMUSG00000050996 Cetn1 caltractin centrin 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-40 chr2 145791099 145791308 + 1.32595962126035 NA intron (NM_028724, intron 2 of 12) intron (NM_028724, intron 2 of 12) 5087 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-73 chr9 6432908 6433122 + 1.32595962126035 NA Intergenic Intergenic -166468 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-8 chr11 23665032 23665266 + 1.32595962126035 NA promoter-TSS (NM_028956) promoter-TSS (NM_028956) -525 NM_028956 74467 Mm.29536 NM_028304 ENSMUSG00000020280 Pus10 2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139 pseudouridylate synthase 10 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-23 chr4 88516073 88516323 + 1.32595962126035 NA Intergenic Intergenic 6596 NM_010510 15977 Mm.1245 NM_010510 ENSMUSG00000048806 Ifnb1 IFN-beta|IFNB|Ifb interferon beta 1, fibroblast protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-24 chr16 30487907 30488134 + 1.32595962126035 NA Intergenic Intergenic 62558 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-16 chr15 80342617 80342826 + 1.32595962126035 NA intron (NM_001044308, intron 5 of 36) intron (NM_001044308, intron 5 of 36) 55483 NM_001044308 239556 Mm.291058 NM_001044308 ENSMUSG00000022416 Cacna1i Ca(V)3.3 calcium channel, voltage-dependent, alpha 1I subunit protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-13 chr12 32061078 32061281 + 1.32595962126035 NA promoter-TSS (NM_011158) promoter-TSS (NM_011158) 100 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-4 chr1 190978217 190978419 + 1.32595962126035 NA exon (NM_144879, exon 2 of 8) exon (NM_144879, exon 2 of 8) 680 NM_144879 226841 Mm.22856 NM_144879 ENSMUSG00000037568 Vash2 B130052G07Rik vasohibin 2 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-12 chr13 49216310 49216536 + 1.32595962126035 NA promoter-TSS (NM_026738) promoter-TSS (NM_026738) -397 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-17 chr13 51127389 51127633 + 1.32595962126035 NA intron (NM_146043, intron 2 of 5) intron (NM_146043, intron 2 of 5) -6807 NM_011462 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-66 chr7 100963968 100964189 + 1.32595962126035 NA intron (NM_183168, intron 1 of 2) intron (NM_183168, intron 1 of 2) 288 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-5 chr5 104424686 104424915 + 1.32595962126035 NA Intergenic Intergenic -10311 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak2_6_11_-1.03915344778274_3.06538577682978_1.32595962126035-27 chr5 104352768 104353070 + 1.32595962126035 NA Intergenic Intergenic 27590 NM_053172 94111 Mm.196672 NM_053172 ENSMUSG00000053863 Mepe Of45 matrix extracellular phosphoglycoprotein with ASARM motif (bone) protein-coding unique_peak1_12_6_0.625238231970754_3.11997403804298_1.32595962126035-29 chr17 80767911 80768144 + 1.32595962126035 NA Intergenic Intergenic -40002 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-14 chr13 23444543 23444756 + 1.32521814697968 NA Intergenic Intergenic -13632 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-12 chr14 118766686 118766978 + 1.32521814697968 NA Intergenic Intergenic -21039 NM_001160098 58187 Mm.390755 NM_021386 ENSMUSG00000022132 Cldn10 6720456I16Rik|Cldn10a|Cldn10b|D14Ertd728e claudin 10 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-53 chr7 112273474 112273720 + 1.32521814697968 NA intron (NM_001193305, intron 3 of 25) ID_B1|SINE|B4 47761 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-20 chr15 60072082 60072473 + 1.32521814697968 NA Intergenic Intergenic -55659 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-26 chr9 6552200 6552542 + 1.32521814697968 NA Intergenic Intergenic -285824 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-3 chr10 17530958 17531202 + 1.32521814697968 NA Intergenic Intergenic -192148 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-30 chr19 21833735 21834079 + 1.32521814697968 NA intron (NM_001033759, intron 17 of 23) intron (NM_001033759, intron 17 of 23) 55567 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-20 chr2 167759441 167759756 + 1.32521814697968 NA Intergenic Intergenic 68421 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-27 chr9 56215198 56215565 + 1.32521814697968 NA intron (NM_172924, intron 6 of 6) intron (NM_172924, intron 6 of 6) -54311 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-46 chr4 43041044 43041371 + 1.32521814697968 NA promoter-TSS (NM_001253353) promoter-TSS (NM_001253353) -906 NM_001253354 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-6 chr12 9569474 9569753 + 1.32521814697968 NA intron (NR_045488, intron 2 of 3) intron (NR_045488, intron 2 of 3) 972 NR_045488 69420 Mm.396193 NR_045488 ENSMUSG00000099360 1700022H16Rik - RIKEN cDNA 1700022H16 gene ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-27 chr17 13492449 13492770 + 1.32521814697968 NA intron (NR_045437, intron 3 of 3) intron (NR_045437, intron 3 of 3) -28847 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-33 chr2 152802971 152803325 + 1.32521814697968 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 25341 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968 chr1 11098635 11098864 + 1.32521814697968 NA intron (NM_029525, intron 7 of 39) intron (NM_029525, intron 7 of 39) 105284 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-23 chr5 149378189 149378457 + 1.32521814697968 NA Intergenic Intergenic -33426 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-8 chr10 28304261 28304582 + 1.32521814697968 NA intron (NM_001359356, intron 3 of 30) intron (NM_001359356, intron 3 of 30) 229601 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-66 chr9 67071841 67072053 + 1.32521814697968 NA Intergenic MIR3|SINE|MIR -22734 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-25 chr8 22499316 22499658 + 1.32521814697968 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -22608 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968 chr17 21473370 21473598 + 1.32521814697968 NA Intergenic Intergenic -15504 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-17 chr14 49245531 49245797 + 1.32521814697968 NA promoter-TSS (NM_025956) promoter-TSS (NM_025956) -236 NM_025956 67082 Mm.87439 NM_025956 ENSMUSG00000021850 1700011H14Rik Ccdc198 RIKEN cDNA 1700011H14 gene protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-28 chr17 46027941 46028192 + 1.32521814697968 NA intron (NM_001025250, intron 2 of 7) intron (NM_001025250, intron 2 of 7) -2903 NM_001110268 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968 chr1 12693021 12693349 + 1.32521814697968 NA intron (NM_001198566, intron 1 of 20) intron (NM_001198566, intron 1 of 20) 755 NM_001198565 240725 Mm.45563 NM_172294 ENSMUSG00000016918 Sulf1 AI467640|AW121680|mKIAA1077 sulfatase 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-58 chr8 69847985 69848233 + 1.32521814697968 NA intron (NR_151670, intron 1 of 3) intron (NR_151670, intron 1 of 3) 15485 NR_151669 80720 Mm.210823 NM_001024954 ENSMUSG00000031860 Pbx4 2410015M21Rik|AI429113|AW045266 pre B cell leukemia homeobox 4 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-9 chr10 68968569 68968834 + 1.32521814697968 NA Intergenic Intergenic -239851 NM_001252636 69288 Mm.26659 NM_001081347 ENSMUSG00000019944 Rhobtb1 1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930 Rho-related BTB domain containing 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-51 chr7 45075941 45076145 + 1.32521814697968 NA intron (NM_001163684, intron 4 of 8) intron (NM_001163684, intron 4 of 8) 13614 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-5 chr1 133965332 133965752 + 1.32521814697968 NA Intergenic Intergenic -44141 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-11 chr13 104470793 104471031 + 1.32521814697968 NA intron (NR_136938, intron 24 of 26) intron (NR_136938, intron 24 of 26) 183077 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-25 chr16 36989921 36990267 + 1.32521814697968 NA intron (NM_001358217, intron 1 of 3) intron (NM_001358217, intron 1 of 3) 373 NM_001358217 207215 Mm.211899 NM_001037321 ENSMUSG00000047746 Fbxo40 9830003A13Rik|mKIAA1195 F-box protein 40 protein-coding common_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-2 chr8 11801183 11801416 + 1.32521814697968 NA intron (NM_017402, intron 7 of 19) intron (NM_017402, intron 7 of 19) -39222 NM_029326 75528 Mm.440342 NM_029326 ENSMUSG00000031512 Tex29 1700018L24Rik testis expressed 29 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-65 chr9 43231847 43232161 + 1.32521814697968 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 7812 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-40 chr3 98334583 98334888 + 1.32521814697968 NA intron (NM_016966, intron 1 of 11) intron (NM_016966, intron 1 of 11) 5234 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-15 chr17 14489691 14489926 + 1.32521814697968 NA Intergenic Intergenic -90866 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-55 chr7 141338055 141338506 + 1.32521814697968 NA promoter-TSS (NM_133191) promoter-TSS (NM_133191) 503 NM_001282073 54006 Mm.28392 NM_016874 ENSMUSG00000058886 Deaf1 AU042387|C230009B13Rik|NUDR DEAF1, transcription factor protein-coding common_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-2 chr3 40950644 40950915 + 1.32521814697968 NA intron (NM_001040399, intron 1 of 9) CpG-9127 148 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-38 chr3 81376293 81376585 + 1.32521814697968 NA Intergenic Intergenic 340023 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968 chr17 15022088 15022389 + 1.32521814697968 NA 3' UTR (NM_001123372, exon 12 of 12) 3' UTR (NM_001123372, exon 12 of 12) -12054 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-4 chr1 70795035 70795236 + 1.32521814697968 NA intron (NM_177164, intron 3 of 3) intron (NM_177164, intron 3 of 3) 69420 NM_177164 320460 Mm.360649 NM_177164 ENSMUSG00000045648 Vwc2l A830006F12Rik|Brl von Willebrand factor C domain-containing protein 2-like protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-18 chr2 129297485 129297690 + 1.32521814697968 NA promoter-TSS (NM_181589) promoter-TSS (NM_181589) 217 NR_040371 100503468 Mm.446943 NR_040371 ENSMUSG00000085498 Gm14023 - predicted gene 14023 ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-44 chr3 144996606 144996832 + 1.32521814697968 NA Intergenic Intergenic -21674 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-29 chr9 94691314 94691608 + 1.32521814697968 NA intron (NM_177909, intron 2 of 15) intron (NM_177909, intron 2 of 15) 21569 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-12 chr12 70909917 70910190 + 1.32521814697968 NA Intergenic Intergenic -27804 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-18 chr15 10696838 10697068 + 1.32521814697968 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 16587 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-15 chr13 56582170 56582471 + 1.32521814697968 NA Intergenic Intergenic -27266 NM_009369 21810 Mm.14455 NM_009369 ENSMUSG00000035493 Tgfbi 68kDa|AI181842|AI747162|Beta-ig|big-h3 transforming growth factor, beta induced protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-9 chr13 23574665 23574946 + 1.32521814697968 NA promoter-TSS (NM_178204) promoter-TSS (NM_178204) 424 NM_178188 319165 Mm.390553 NM_178188 ENSMUSG00000071478 Hist1h2ad - histone cluster 1, H2ad protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-64 chr8 129233788 129233990 + 1.32521814697968 NA intron (NM_153780, intron 1 of 4) intron (NM_153780, intron 1 of 4) 157 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-49 chr5 72868144 72868337 + 1.32521814697968 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 208 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-60 chr8 119959572 119959859 + 1.32521814697968 NA Intergenic Intergenic -32723 NM_030209 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-45 chr3 151330582 151330845 + 1.32521814697968 NA Intergenic Intergenic -107169 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-28 chr9 62175598 62175954 + 1.32521814697968 NA Intergenic Intergenic -53182 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-26 chr16 92929224 92929602 + 1.32521814697968 NA Intergenic Intergenic -103339 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-32 chr2 132111344 132111538 + 1.32521814697968 NA intron (NM_001355430, intron 1 of 15) intron (NM_001355430, intron 1 of 15) 33667 NM_001355431 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-10 chr13 97525162 97525410 + 1.32521814697968 NA Intergenic Intergenic -34714 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-67 chr9 111633435 111633825 + 1.32521814697968 NA intron (NM_001324546, intron 1 of 9) intron (NM_001324546, intron 1 of 9) 56718 NM_016853 20840 Mm.1414 NM_016853 ENSMUSG00000032502 Stac - src homology three (SH3) and cysteine rich domain protein-coding common_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-5 chr7 127800905 127801172 + 1.32521814697968 NA TTS (NM_178029) TTS (NM_178029) 429 NM_001040684 101502 Mm.157103 NM_133943 ENSMUSG00000042289 Hsd3b7 AI195443|BB098564 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-63 chr8 125872935 125873275 + 1.32521814697968 NA intron (NM_175561, intron 8 of 33) intron (NM_175561, intron 8 of 33) -24809 NR_155422 102632990 Mm.429446 NR_155422 A730098A19Rik - RIKEN cDNA A730098A19 gene ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-37 chr3 79994752 79994965 + 1.32521814697968 NA Intergenic Intergenic 108928 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-42 chr3 116804869 116805090 + 1.32521814697968 NA intron (NM_001362367, intron 2 of 27) intron (NM_001362367, intron 2 of 27) 3187 NM_001362367 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-57 chr8 25803626 25803957 + 1.32521814697968 NA 3' UTR (NM_026032, exon 4 of 4) 3' UTR (NM_026032, exon 4 of 4) -4683 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-10 chr10 85101867 85102076 + 1.32521814697968 NA promoter-TSS (NM_001013028) promoter-TSS (NM_001013028) 524 NM_010214 14202 Mm.46163 NM_010214 ENSMUSG00000050035 Fhl4 - four and a half LIM domains 4 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-50 chr5 149132014 149132417 + 1.32521814697968 NA intron (NR_015478, intron 1 of 2) B1F|SINE|Alu -12048 NR_137278 105242579 Mm.445929 NR_137278 ENSMUSG00000107388 Gm42788 - predicted gene 42788 ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-6 chr1 149857197 149857638 + 1.32521814697968 NA intron (NM_008869, intron 14 of 17) intron (NM_008869, intron 14 of 17) 65022 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-54 chr7 126585080 126585641 + 1.32521814697968 NA 5' UTR (NM_001146311, exon 1 of 18) 5' UTR (NM_001146311, exon 1 of 18) 352 NM_138310 171504 Mm.170665 NM_138310 ENSMUSG00000042759 Apobr Apob-48r|Apob48r apolipoprotein B receptor protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-43 chr3 142375124 142375351 + 1.32521814697968 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 16613 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-19 chr2 156731679 156732002 + 1.32521814697968 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 10561 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-16 chr2 24443743 24444130 + 1.32521814697968 NA intron (NM_011040, intron 3 of 11) intron (NM_011040, intron 3 of 11) 31663 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-4 chr11 58225497 58225720 + 1.32521814697968 NA Intergenic Intergenic 10631 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-21 chr15 74618312 74618564 + 1.32521814697968 NA intron (NM_001177437, intron 12 of 26) intron (NM_001177437, intron 12 of 26) 17880 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-47 chr4 88938688 88938903 + 1.32521814697968 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 3247 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-4 chr5 103736638 103736888 + 1.32521814697968 NA Intergenic Intergenic -17399 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-24 chr16 30507164 30507512 + 1.32521814697968 NA Intergenic Intergenic 43240 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-7 chr12 85192591 85192818 + 1.32521814697968 NA Intergenic Intergenic -15391 NM_008827 18654 Mm.4809 NM_008827 ENSMUSG00000004791 Pgf AI854365|PIGF|Plgf placental growth factor protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-34 chr3 27209531 27209754 + 1.32521814697968 NA intron (NM_178772, intron 1 of 4) intron (NM_178772, intron 1 of 4) 26638 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-13 chr12 108834803 108835088 + 1.32521814697968 NA intron (NM_181328, intron 1 of 3) intron (NM_181328, intron 1 of 3) 931 NM_181328 214663 Mm.266264 NM_181328 ENSMUSG00000021265 Slc25a29 C030003J19Rik|CACL|mCACL solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-62 chr8 123137408 123137718 + 1.32521814697968 NA Intergenic Intergenic 7457 NR_106048 102465655 NR_106048 ENSMUSG00000098582 Mir7080 Gm27911|mmu-mir-7080 microRNA 7080 ncRNA unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-8 chr13 5826548 5826907 + 1.32521814697968 NA Intergenic Intergenic 31365 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-24 chr6 88905293 88905548 + 1.32521814697968 NA intron (NM_011906, intron 1 of 11) intron (NM_011906, intron 1 of 11) 3169 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-22 chr15 83159582 83159783 + 1.32521814697968 NA intron (NM_029787, intron 7 of 8) intron (NM_029787, intron 7 of 8) 10037 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-19 chr15 38712863 38713130 + 1.32521814697968 NA TTS (NR_131206) TTS (NR_131206) 15520 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-14 chr16 49857516 49857809 + 1.32521814697968 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 2008 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-16 chr14 34091073 34091459 + 1.32521814697968 NA intron (NM_013473, intron 3 of 11) intron (NM_013473, intron 3 of 11) 5287 NM_013473 11752 Mm.3267 NM_013473 ENSMUSG00000021950 Anxa8 AI466995|Anx8 annexin A8 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-48 chr4 152274142 152274522 + 1.32521814697968 NA promoter-TSS (NM_178406) promoter-TSS (NM_178406) -30 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding unique_peak2_18_6_1.16886351206079_3.391786678088_1.32521814697968 chr5 136556550 136556752 + 1.32521814697968 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 9330 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-7 chr1 181010674 181010906 + 1.32521814697968 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 6779 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-31 chr19 44720386 44720621 + 1.32521814697968 NA Intergenic CpG -36891 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-61 chr8 122169795 122169988 + 1.32521814697968 NA Intergenic Intergenic -112250 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-3 chr4 41740654 41740921 + 1.32521814697968 NA exon (NM_001286540, exon 2 of 4) exon (NM_001286540, exon 2 of 4) 572 NM_001286540 18391 Mm.425181 NM_011014 ENSMUSG00000036078 Sigmar1 Oprs1|Sig1R|sigma1R sigma non-opioid intracellular receptor 1 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-22 chr4 136147423 136147684 + 1.32521814697968 NA Intergenic MIRb|SINE|MIR 3731 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-59 chr8 95154499 95154744 + 1.32521814697968 NA Intergenic Intergenic -12081 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-35 chr3 60129352 60129695 + 1.32521814697968 NA Intergenic Intergenic 47654 NM_032400 84112 Mm.125110 NM_032400 ENSMUSG00000027762 Sucnr1 Gpr91 succinate receptor 1 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-2 chr1 40543623 40543906 + 1.32521814697968 NA intron (NM_010553, intron 11 of 12) intron (NM_010553, intron 11 of 12) 28402 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-36 chr3 60615747 60615985 + 1.32521814697968 NA intron (NM_001253711, intron 6 of 7) intron (NM_001253711, intron 6 of 7) 114687 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-52 chr7 79780736 79780999 + 1.32521814697968 NA intron (NM_001037927, intron 17 of 17) intron (NM_001037927, intron 17 of 17) 12723 NM_008588 17292 Mm.1404 NM_008588 ENSMUSG00000030544 Mesp1 bHLHc5 mesoderm posterior 1 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-13 chr16 11505349 11505623 + 1.32521814697968 NA intron (NM_028964, intron 13 of 20) intron (NM_028964, intron 13 of 20) 99838 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-23 chr15 95380328 95380515 + 1.32521814697968 NA intron (NM_001356950, intron 12 of 20) intron (NM_001356950, intron 12 of 20) 147593 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-56 chr7 143296844 143297125 + 1.32521814697968 NA promoter-TSS (NR_001461) promoter-TSS (NR_001461) -437 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-41 chr3 102367261 102367551 + 1.32521814697968 NA Intergenic Intergenic -102513 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-3 chr1 62777650 62777960 + 1.32521814697968 NA intron (NM_001077404, intron 12 of 16) intron (NM_001077404, intron 12 of 16) 16927 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-17 chr2 117805243 117805612 + 1.32521814697968 NA non-coding (NR_126427, exon 3 of 3) non-coding (NR_126427, exon 3 of 3) 7375 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-29 chr18 77940232 77940472 + 1.32521814697968 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 1885 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-21 chr3 53111421 53111823 + 1.32521814697968 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 70075 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-39 chr3 84951609 84952093 + 1.32521814697968 NA promoter-TSS (NM_080428) promoter-TSS (NM_080428) -360 NM_080428 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-2 chr1 13373728 13374014 + 1.32521814697968 NA intron (NM_008678, intron 1 of 22) CpG 212 NM_008678 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding unique_peak2_6_16_-1.54165378831193_3.31663594709438_1.32521814697968-5 chr11 68077533 68077866 + 1.32521814697968 NA intron (NM_018768, intron 6 of 7) intron (NM_018768, intron 6 of 7) 111241 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding unique_peak1_18_6_1.16886351206079_3.391786678088_1.32521814697968-11 chr11 118153880 118154082 + 1.32521814697968 NA Intergenic Intergenic -24762 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_54_68_-0.60969215542723_5.80367837906455_1.32472457598199 chr17 15009525 15010090 + 1.32472457598199 NA promoter-TSS (NM_001123372) promoter-TSS (NM_001123372) -33 NM_001123372 100041621 Mm.458576 NM_001123372 ENSMUSG00000036552 Gm3435 - predicted gene 3435 protein-coding common_peak1_82_45_0.564761664833905_5.80594278847397_1.32472457598197 chr1 135021486 135022060 + 1.32472457598197 NA intron (NM_001033409, intron 6 of 17) intron (NM_001033409, intron 6 of 17) 59208 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding unique_peak1_82_45_0.564761664833905_5.80594278847397_1.32472457598197 chr19 53800919 53801795 + 1.32472457598197 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) -90874 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_82_45_0.564761664833905_5.80594278847397_1.32472457598197-2 chr11 80779120 80779932 + 1.32472457598197 NA intron (NM_177390, intron 1 of 21) intron (NM_177390, intron 1 of 21) 499 NM_177390 338367 Mm.151948 NM_177390 ENSMUSG00000035441 Myo1d 9930104H07Rik|AW544947|D11Ertd9e|myosin-1d myosin ID protein-coding common_peak2_129_140_-0.40846623833629_6.93531823323065_1.32471929459113 chr16 33056193 33057735 + 1.32471929459113 NA promoter-TSS (NM_178378) promoter-TSS (NM_178378) 450 NM_021338 57808 Mm.19355 NM_021338 ENSMUSG00000060636 Rpl35a 2810431L15Rik|Rpl35 ribosomal protein L35A protein-coding common_peak2_171_106_0.390665584661797_6.93679977873204_1.32471929459111 chr15 98762493 98763630 + 1.32471929459111 NA promoter-TSS (NM_007478) promoter-TSS (NM_007478) 57 NM_007478 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding common_peak2_113_125_-0.43433584630056_6.76011200034964_1.32471928613113 chr19 4148619 4149849 + 1.32471928613113 NA intron (NM_011778, intron 1 of 10) intron (NM_011778, intron 1 of 10) 571 NM_011778 23789 Mm.276859 NM_011778 ENSMUSG00000024835 Coro1b - coronin, actin binding protein 1B protein-coding common_peak2_191_120_0.370847470450923_7.10428697250006_1.32358901793376 chr2 145860066 145862059 + 1.32358901793376 NA exon (NM_028724, exon 9 of 13) exon (NM_028724, exon 9 of 13) -42179 NM_026425 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding common_peak1_181_113_0.380197250718013_7.02298863952375_1.3232844407518 chr2 30721163 30723131 + 1.3232844407518 NA TTS (NR_037272) TTS (NR_037272) 937 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_143_87_0.418169670888919_6.66851645408176_1.32288943029308 chr9 47530317 47532042 + 1.32288943029308 NA intron (NM_001025600, intron 1 of 8) CpG 827 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_105_118_-0.456102687611327_6.66676641950228_1.32288943029306 chr15 59826497 59827409 + 1.32288943029306 NA Intergenic Intergenic -31994 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_63_33_0.628467243820968_5.40169646316082_1.32032392063167 chr19 38593661 38594190 + 1.32032392063167 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 69728 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak1_63_33_0.628467243820968_5.40169646316082_1.32032392063167-2 chr9 71689535 71690919 + 1.32032392063167 NA intron (NM_001304362, intron 8 of 18) intron (NM_001304362, intron 8 of 18) 81375 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak1_64_33_0.650677252385409_5.41280146744304_1.32032392063167-3 chr18 57877796 57878393 + 1.32032392063167 NA promoter-TSS (NM_009194) promoter-TSS (NM_009194) -584 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak2_39_53_-0.712245538765038_5.39876473278095_1.32032392063167 chr1 13372776 13373592 + 1.32032392063167 NA promoter-TSS (NM_001302702) promoter-TSS (NM_001302702) -755 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_64_33_0.650677252385409_5.41280146744304_1.32032392063167-4 chr3 51484061 51484643 + 1.32032392063167 NA exon (NM_016858, exon 1 of 2) exon (NM_016858, exon 1 of 2) 386 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak1_64_33_0.650677252385409_5.41280146744304_1.32032392063167-2 chr14 31830032 31830555 + 1.32032392063167 NA intron (NM_001024604, intron 1 of 27) CpG 122 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak1_64_33_0.650677252385409_5.41280146744304_1.32032392063167 chr1 86111092 86112024 + 1.32032392063167 NA intron (NM_008311, intron 1 of 3) intron (NM_008311, intron 1 of 3) 412 NM_008311 15559 Mm.439747 NM_008311 ENSMUSG00000026228 Htr2b 5-HT2B|AJ012488|AV377389 5-hydroxytryptamine (serotonin) receptor 2B protein-coding common_peak2_39_53_-0.712245538765038_5.39876473278095_1.32032392063167-3 chr4 118427409 118428002 + 1.32032392063167 NA promoter-TSS (NM_019422) promoter-TSS (NM_019422) -388 NM_001039175 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding common_peak2_63_33_0.628467243820968_5.40169646316082_1.32032392063167 chr3 32529501 32530085 + 1.32032392063167 NA intron (NM_024200, intron 1 of 17) CpG 311 NM_024200 67414 Mm.290414 NM_024200 ENSMUSG00000027668 Mfn1 2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032 mitofusin 1 protein-coding common_peak2_39_53_-0.712245538765038_5.39876473278095_1.32032392063167-2 chr16 8470779 8471545 + 1.32032392063167 NA intron (NM_146247, intron 1 of 10) intron (NM_146247, intron 1 of 10) 349 NM_146247 239706 Mm.214953 NM_146247 ENSMUSG00000039345 Mettl22 - methyltransferase like 22 protein-coding common_peak1_121_133_-0.42598810072814_6.8530951400937_1.31935763493169 chr6 88961337 88962182 + 1.31935763493169 NA Intergenic Intergenic 59508 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_76_41_0.588517029392428_5.68657593747498_1.31927499872969 chr14 56886721 56887549 + 1.31927499872969 NA intron (NM_001360643, intron 1 of 24) CpG-4519 292 NM_001360643 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak1_49_63_-0.637701137847691_5.68114943107615_1.31927499872969-3 chr7 80400338 80401011 + 1.31927499872969 NA intron (NM_001081454, intron 1 of 15) intron (NM_001081454, intron 1 of 15) 2138 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_76_41_0.588517029392428_5.68657593747498_1.31927499872969-2 chr5 140648061 140648924 + 1.31927499872969 NA intron (NM_001308040, intron 1 of 12) intron (NM_001308040, intron 1 of 12) 539 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding common_peak1_49_63_-0.637701137847691_5.68114943107615_1.31927499872969-2 chr2 108623152 108623871 + 1.31927499872969 NA Intergenic Intergenic 654779 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding common_peak2_76_41_0.588517029392428_5.68657593747498_1.31927499872969 chr10 77210674 77211221 + 1.31927499872969 NA Intergenic Intergenic -44417 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_76_41_0.588517029392428_5.68657593747498_1.31927499872969-2 chr9 50006076 50006549 + 1.31927499872969 NA Intergenic Intergenic -206919 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_49_63_-0.637701137847691_5.68114943107615_1.31927499872969 chr10 59899126 59899651 + 1.31927499872969 NA Intergenic Intergenic 19797 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_119_70_0.466675466547959_6.38308485277866_1.31912815613035 chr19 36207096 36207952 + 1.31912815613035 NA Intergenic Intergenic -87680 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-7 chr18 62477295 62477525 + 1.31827279259406 NA Intergenic Intergenic 66442 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-28 chr19 34120407 34120618 + 1.31827279259406 NA intron (NM_023903, intron 9 of 9) intron (NM_023903, intron 9 of 9) 19569 NM_023903 78753 Mm.195937 NM_023903 ENSMUSG00000056078 Lipm 4632427C23Rik|AW227514|Lipl3 lipase, family member M protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-47 chr6 58840380 58840584 + 1.31827279259406 NA intron (NM_028705, intron 1 of 24) intron (NM_028705, intron 1 of 24) 6782 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-51 chr7 128555286 128555536 + 1.31827279259406 NA Intergenic Intergenic 31828 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-36 chrX 12937676 12937899 + 1.31827279259406 NA exon (NM_001272033, exon 1 of 1) exon (NM_001272033, exon 1 of 1) 914 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-19 chr14 43347336 43347592 + 1.31827279259406 NA intron (NM_027940, intron 1 of 4) intron (NM_027940, intron 1 of 4) 347 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-10 chr11 101277409 101277652 + 1.31827279259406 NA TTS (NM_026618) TTS (NM_026618) 1418 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-21 chr14 66008890 66009164 + 1.31827279259406 NA intron (NM_178747, intron 1 of 11) intron (NM_178747, intron 1 of 11) 183 NM_178747 268756 Mm.26207 NM_178747 ENSMUSG00000034450 Gulo 5730581M22|AU018375|BC028822|GLO|LGO|sfx|unh|unhip gulonolactone (L-) oxidase protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-59 chr9 62558504 62558828 + 1.31827279259406 NA Intergenic Intergenic -21622 NM_175484 235431 Mm.335229 NM_175484 ENSMUSG00000041729 Coro2b CLIPINC|E130012P22Rik coronin, actin binding protein, 2B protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-3 chr1 86529099 86529345 + 1.31827279259406 NA exon (NM_001360831, exon 2 of 5) exon (NM_001360831, exon 2 of 5) 2665 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-12 chr13 41865607 41865835 + 1.31827279259406 NA promoter-TSS (NR_033545) promoter-TSS (NR_033545) -194 NR_033545 100038577 Mm.387093 NR_033545 ENSMUSG00000113856 Gm10790 - predicted gene 10790 ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-65 chrX 142964925 142965195 + 1.31827279259406 NA intron (NM_019496, intron 1 of 5) intron (NM_019496, intron 1 of 5) 1668 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-50 chr6 92425328 92425663 + 1.31827279259406 NA intron (NM_001134461, intron 3 of 7) intron (NM_001134461, intron 3 of 7) 55897 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-39 chr4 150570713 150571033 + 1.31827279259406 NA intron (NM_001085492, intron 12 of 22) intron (NM_001085492, intron 12 of 22) 81301 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-6 chr8 60952813 60953130 + 1.31827279259406 NA intron (NM_007711, intron 1 of 11) intron (NM_007711, intron 1 of 11) 1828 NM_173876 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-25 chr2 32901571 32901875 + 1.31827279259406 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 25589 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-2 chr1 79702924 79703221 + 1.31827279259406 NA 3' UTR (NM_001111279, exon 12 of 12) 3' UTR (NM_001111279, exon 12 of 12) -31100 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-44 chr6 17466012 17466204 + 1.31827279259406 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 2151 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-8 chr10 41521391 41521608 + 1.31827279259406 NA intron (NM_016898, intron 1 of 5) intron (NM_016898, intron 1 of 5) 1999 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-19 chr18 60744617 60744917 + 1.31827279259406 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 1979 NM_001348101 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-2 chr4 89062045 89062251 + 1.31827279259406 NA intron (NR_033533, intron 2 of 2) intron (NR_033533, intron 2 of 2) 11841 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-26 chr2 101993017 101993286 + 1.31827279259406 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 106889 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-53 chr7 80092241 80092460 + 1.31827279259406 NA 3' UTR (NM_001146000, exon 6 of 6) 3' UTR (NM_001146000, exon 6 of 6) -17093 NR_045695 100859962 Mm.392575 NR_045695 ENSMUSG00000108714 Gm21057 - predicted gene, 21057 ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-37 chr2 117547177 117547379 + 1.31827279259406 NA Intergenic Intergenic -204401 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-62 chr9 103041379 103041594 + 1.31827279259406 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 32997 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-4 chr2 26068405 26068681 + 1.31827279259406 NA intron (NM_001037098, intron 2 of 5) intron (NM_001037098, intron 2 of 5) 23853 NM_001037098 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-6 chr11 8496780 8497016 + 1.31827279259406 NA intron (NM_001083587, intron 16 of 30) intron (NM_001083587, intron 16 of 30) 167637 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-62 chr9 71654288 71654681 + 1.31827279259406 NA intron (NM_001304362, intron 10 of 18) intron (NM_001304362, intron 10 of 18) -62124 NM_001033208 102371 Mm.27585 NM_001033208 ENSMUSG00000041361 Myzap AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap myocardial zonula adherens protein protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-8 chr9 107708649 107708851 + 1.31827279259406 NA intron (NM_011349, intron 1 of 17) intron (NM_011349, intron 1 of 17) 1725 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-6 chr11 99471063 99471312 + 1.31827279259406 NA Intergenic Intergenic 21923 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-25 chr4 135962577 135962783 + 1.31827279259406 NA TTS (NM_008254) TTS (NM_008254) -1045 NM_001356493 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding common_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-5 chr7 98179565 98179872 + 1.31827279259406 NA intron (NR_045971, intron 3 of 3) MIRc|SINE|MIR -1444 NM_007602 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-6 chr6 34749392 34749581 + 1.31827279259406 NA intron (NM_145575, intron 3 of 11) intron (NM_145575, intron 3 of 11) -30946 NM_001289658 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-41 chr5 33955785 33956054 + 1.31827279259406 NA Intergenic PB1D9|SINE|Alu -19661 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-2 chr1 52598200 52598428 + 1.31827279259406 NA Intergenic Intergenic -18022 NR_151614 102634661 Mm.337881 NR_151614 ENSMUSG00000099878 Gm28178 - predicted gene 28178 ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-30 chr2 5614457 5614672 + 1.31827279259406 NA intron (NM_001290374, intron 1 of 9) intron (NM_001290374, intron 1 of 9) 61482 NM_001290376 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-61 chr9 71804575 71804826 + 1.31827279259406 NA Intergenic B3|SINE|B2 -33098 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-5 chr10 108434908 108435126 + 1.31827279259406 NA Intergenic Intergenic 102828 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-18 chr15 51846114 51846448 + 1.31827279259406 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 19180 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-14 chr13 110643733 110644089 + 1.31827279259406 NA Intergenic Intergenic 248867 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-17 chr17 83705943 83706155 + 1.31827279259406 NA promoter-TSS (NM_001171053) promoter-TSS (NM_001171053) -114 NM_001171054 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-4 chr10 60282328 60282673 + 1.31827279259406 NA intron (NM_011179, intron 1 of 14) intron (NM_011179, intron 1 of 14) -1961 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-34 chr4 49521349 49521713 + 1.31827279259406 NA promoter-TSS (NM_178603) promoter-TSS (NM_178603) 355 NM_001289901 230162 Mm.186994 NM_145547 ENSMUSG00000039634 Zfp189 BB131811|C430015I23Rik zinc finger protein 189 protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-8 chr19 38034052 38034289 + 1.31827279259406 NA intron (NM_001302140, intron 1 of 53) B2_Mm2|SINE|B2 9407 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-26 chr18 84852345 84852657 + 1.31827279259406 NA intron (NM_001348159, intron 1 of 5) intron (NM_001348159, intron 1 of 5) 1163 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-29 chr19 42020535 42020722 + 1.31827279259406 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -15410 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-25 chr17 24529597 24529842 + 1.31827279259406 NA TTS (NR_045289) TTS (NR_045289) 1468 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-66 chrX 162019221 162019427 + 1.31827279259406 NA intron (NM_001290526, intron 1 of 8) intron (NM_001290526, intron 1 of 8) 140117 NM_001081052 195727 Mm.336313 NM_001081052 ENSMUSG00000059493 Nhs Gm389|Gm48|Nhs1|Xcat NHS actin remodeling regulator protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-13 chr13 90516111 90516543 + 1.31827279259406 NA Intergenic Intergenic 389028 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-52 chr7 19308411 19308604 + 1.31827279259406 NA intron (NM_001347586, intron 1 of 4) intron (NM_001347586, intron 1 of 4) 1538 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-43 chr4 145230699 145231001 + 1.31827279259406 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 16020 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-27 chr2 137661387 137661683 + 1.31827279259406 NA Intergenic Intergenic -545015 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_7_12_-0.963344694350052_3.21876737096607_1.31827279259406 chr16 32644580 32644776 + 1.31827279259406 NA promoter-TSS (NM_016788) promoter-TSS (NM_016788) 35 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-15 chr13 63146683 63146917 + 1.31827279259406 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) -93229 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-23 chr4 45516267 45516517 + 1.31827279259406 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 14436 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-7 chr1 152022256 152022561 + 1.31827279259406 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 67912 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik RIKEN cDNA 1700025G04 gene protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-60 chr8 82399087 82399373 + 1.31827279259406 NA intron (NM_001254747, intron 1 of 7) RSINE1|SINE|B4 3356 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-18 chr18 24751039 24751295 + 1.31827279259406 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 42544 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-42 chr9 60347401 60347620 + 1.31827279259406 NA intron (NM_001040426, intron 6 of 17) intron (NM_001040426, intron 6 of 17) 163525 NM_001040426 207596 Mm.28791 NM_172444 ENSMUSG00000032289 Thsd4 ADAMTSL-6|ADAMTSL6|AI585901|Adamtsl4|B230114P05Rik thrombospondin, type I, domain containing 4 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-54 chr8 70791658 70791853 + 1.31827279259406 NA intron (NM_199308, intron 1 of 25) intron (NM_199308, intron 1 of 25) 678 NM_199308 546071 Mm.250731 NM_199308 ENSMUSG00000031833 Mast3 BC024265|mKIAA0561 microtubule associated serine/threonine kinase 3 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-21 chr16 97998450 97998730 + 1.31827279259406 NA intron (NM_001362093, intron 1 of 3) intron (NM_001362093, intron 1 of 3) 1243 NR_130962 245305 Mm.148033 NM_001362093 B230307C23Rik 8030444G23Rik|EG245305 RIKEN cDNA B230307C23 gene protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-30 chr3 60569427 60569648 + 1.31827279259406 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 68358 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-17 chr14 21614556 21614799 + 1.31827279259406 NA intron (NM_017479, intron 3 of 16) B1_Mus1|SINE|Alu 99899 NM_001013826 435391 Mm.295860 NM_001013826 ENSMUSG00000063821 Dupd1 EG435391 dual specificity phosphatase and pro isomerase domain containing 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-42 chr5 39761762 39761958 + 1.31827279259406 NA Intergenic Intergenic -117229 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-23 chr19 5052357 5052558 + 1.31827279259406 NA exon (NM_145495, exon 6 of 10) exon (NM_145495, exon 6 of 10) 1649 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406 chr1 153585154 153585365 + 1.31827279259406 NA Intergenic Intergenic -35545 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-9 chr2 157425402 157425605 + 1.31827279259406 NA intron (NM_001025395, intron 1 of 13) intron (NM_001025395, intron 1 of 13) 1210 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-45 chr6 38829852 38830196 + 1.31827279259406 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 7287 NM_001136065 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-59 chr8 67911644 67911879 + 1.31827279259406 NA promoter-TSS (NM_030263) promoter-TSS (NM_030263) -815 NM_030263 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_14_7_0.637587524772373_3.31879376238619_1.31827279259406 chr11 72522633 72522871 + 1.31827279259406 NA intron (NM_029932, intron 8 of 11) intron (NM_029932, intron 8 of 11) 27494 NM_029932 77577 Mm.46185 NM_029932 ENSMUSG00000020798 Spns3 9830002I17Rik spinster homolog 3 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-13 chr13 28533068 28533371 + 1.31827279259406 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 177654 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-3 chr1 82637566 82637794 + 1.31827279259406 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 50759 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-3 chr17 24643644 24643883 + 1.31827279259406 NA intron (NM_023055, intron 2 of 6) intron (NM_023055, intron 2 of 6) 1194 NM_023449 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406 chr1 54128646 54128867 + 1.31827279259406 NA intron (NM_001001883, intron 1 of 28) intron (NM_001001883, intron 1 of 28) 66278 NM_001001883 329152 Mm.132150 NM_172655 ENSMUSG00000042807 Hecw2 A730039N16Rik|D030049F17Rik|Gm971|Nedl2|mKIAA1301 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-53 chr8 11309905 11310128 + 1.31827279259406 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -2789 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-51 chr6 100710030 100710255 + 1.31827279259406 NA intron (NM_198612, intron 1 of 6) RSINE1|SINE|B4 5408 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-9 chr12 20615497 20615729 + 1.31827279259406 NA Intergenic Intergenic 200166 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-8 chr11 88605543 88605770 + 1.31827279259406 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -13595 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-14 chr13 51128747 51128979 + 1.31827279259406 NA intron (NM_146043, intron 3 of 5) intron (NM_146043, intron 3 of 5) -5455 NM_011462 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-37 chr8 25532942 25533176 + 1.31827279259406 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 14300 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-6 chr5 125386235 125386493 + 1.31827279259406 NA exon (NM_019639, exon 2 of 2) exon (NM_019639, exon 2 of 2) 3653 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-6 chr1 150151229 150151434 + 1.31827279259406 NA Intergenic Lx9|LINE|L1 13617 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA common_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-4 chr19 55441732 55441981 + 1.31827279259406 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 125799 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-67 chrX 162829035 162829235 + 1.31827279259406 NA intron (NM_001290777, intron 1 of 5) CpG 319 NM_001290776 353170 Mm.270186 NM_178935 ENSMUSG00000038344 Txlng 4932441K18Rik|Fiat|Lrp taxilin gamma protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-34 chr6 51163262 51163528 + 1.31827279259406 NA Intergenic Intergenic 106515 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-26 chr18 36523750 36524033 + 1.31827279259406 NA Intergenic PB1|SINE|Alu -4261 NM_172830 240215 Mm.135463 NM_172830 ENSMUSG00000024485 Slc4a9 AE4|D630003B07|D630024F24Rik solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-37 chr4 137703281 137703562 + 1.31827279259406 NA intron (NR_138594, intron 1 of 1) intron (NR_138594, intron 1 of 1) 3185 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA unique_peak1_8_12_-0.794618510321899_3.30313046298014_1.31827279259406 chr16 85899532 85899742 + 1.31827279259406 NA exon (NM_011782, exon 1 of 8) exon (NM_011782, exon 1 of 8) 1488 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-5 chr11 76145991 76146294 + 1.31827279259406 NA intron (NM_026664, intron 4 of 21) intron (NM_026664, intron 4 of 21) 33488 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-2 chr13 16010794 16011071 + 1.31827279259406 NA promoter-TSS (NM_008380) promoter-TSS (NM_008380) -919 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-10 chr12 40472320 40472601 + 1.31827279259406 NA intron (NM_172803, intron 1 of 52) intron (NM_172803, intron 1 of 52) 26407 NM_172803 238130 Mm.341423 NM_172803 ENSMUSG00000035954 Dock4 5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716 dedicator of cytokinesis 4 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-24 chr4 114614447 114614681 + 1.31827279259406 NA 3' UTR (NM_001085549, exon 7 of 7) 3' UTR (NM_001085549, exon 7 of 7) -207156 NR_033617 433746 Mm.388908 NR_033617 ENSMUSG00000055198 Gm12830 - predicted gene 12830 ncRNA unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-12 chr12 79515075 79515451 + 1.31827279259406 NA intron (NM_009014, intron 7 of 10) CT-rich|Low_complexity|Low_complexity 217912 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-40 chr9 23218962 23219295 + 1.31827279259406 NA Intergenic Intergenic -3948 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-41 chr9 50885008 50885286 + 1.31827279259406 NA intron (NM_001286553, intron 15 of 16) intron (NM_001286553, intron 15 of 16) 28223 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-31 chr4 134764363 134764627 + 1.31827279259406 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 3509 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-32 chr3 58203101 58203299 + 1.31827279259406 NA Intergenic GA-rich|Low_complexity|Low_complexity -39393 NR_040538 67850 Mm.416968 NR_040538 ENSMUSG00000100666 1700007F19Rik - RIKEN cDNA 1700007F19 gene ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-4 chr10 24394631 24394888 + 1.31827279259406 NA Intergenic GA-rich|Low_complexity|Low_complexity 171242 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-27 chr18 68257869 68258072 + 1.31827279259406 NA Intergenic Intergenic 3003 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-58 chr8 34594879 34595220 + 1.31827279259406 NA intron (NR_040706, intron 3 of 4) intron (NR_040706, intron 3 of 4) 45267 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-56 chr8 126606804 126607073 + 1.31827279259406 NA Intergenic Intergenic -13502 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406 chr11 75813642 75813869 + 1.31827279259406 NA intron (NR_136933, intron 1 of 3) intron (NR_136933, intron 1 of 3) -17695 NM_007873 13447 Mm.5137 NM_007873 ENSMUSG00000020848 Doc2b - double C2, beta protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-24 chr19 18761577 18761916 + 1.31827279259406 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 11763 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-3 chr18 54174819 54175039 + 1.31827279259406 NA Intergenic Intergenic -247366 NR_040338 77433 Mm.159919 NR_040338 Redrum 9430076G02Rik Redrum, erythroid developmental long intergenic non-protein coding transcript ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-9 chr13 107486055 107486254 + 1.31827279259406 NA Intergenic Intergenic 16332 NR_045084 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-33 chr7 112055725 112055924 + 1.31827279259406 NA intron (NM_133758, intron 3 of 27) intron (NM_133758, intron 3 of 27) 32318 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-20 chr14 54641109 54641345 + 1.31827279259406 NA TTS (NM_001085472) TTS (NM_001085472) 137 NM_199470 239096 Mm.386871 NM_199470 ENSMUSG00000059674 Cdh24 1700040A22Rik cadherin-like 24 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-4 chr1 91028038 91028341 + 1.31827279259406 NA intron (NM_001111312, intron 1 of 12) (CA)n|Simple_repeat|Simple_repeat -25255 NM_001111311 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-21 chr2 120731557 120731836 + 1.31827279259406 NA promoter-TSS (NM_026891) promoter-TSS (NM_026891) -179 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-44 chr9 114933678 114934048 + 1.31827279259406 NA 5' UTR (NM_175380, exon 1 of 8) 5' UTR (NM_175380, exon 1 of 8) 124 NM_175380 333433 Mm.38198 NM_175380 ENSMUSG00000050627 Gpd1l 2210409H23Rik|D9Ertd660e glycerol-3-phosphate dehydrogenase 1-like protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-11 chr12 27429940 27430185 + 1.31827279259406 NA Intergenic Intergenic -87344 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-28 chr5 142903137 142903346 + 1.31827279259406 NA 3' UTR (NM_007393, exon 6 of 6) 3' UTR (NM_007393, exon 6 of 6) 3513 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-28 chr2 24469277 24469507 + 1.31827279259406 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 6207 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-24 chr18 62545077 62545283 + 1.31827279259406 NA intron (NM_001361089, intron 1 of 22) intron (NM_001361089, intron 1 of 22) -1328 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-15 chr14 77198119 77198326 + 1.31827279259406 NA intron (NM_001253759, intron 1 of 19) intron (NM_001253759, intron 1 of 19) 41459 NM_172813 239188 Mm.441158 NM_172813 ENSMUSG00000022012 Enox1 B230207J08|D230005D02Rik ecto-NOX disulfide-thiol exchanger 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-7 chr11 12432243 12432517 + 1.31827279259406 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) -20240 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406 chr1 16224741 16225006 + 1.31827279259406 NA Intergenic Intergenic 118991 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-5 chr1 136700231 136700472 + 1.31827279259406 NA intron (NR_037986, intron 1 of 4) PB1D9|SINE|Alu 4140 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-10 chr4 126251643 126251843 + 1.31827279259406 NA intron (NM_001145970, intron 1 of 16) intron (NM_001145970, intron 1 of 16) 4576 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-43 chr5 125134499 125134696 + 1.31827279259406 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 44617 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-36 chr2 68091252 68091482 + 1.31827279259406 NA Intergenic Intergenic -13305 NM_020283 26877 Mm.226435 NM_020283 ENSMUSG00000034780 B3galt1 beta3Gal-T1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-40 chr4 154226881 154227205 + 1.31827279259406 NA intron (NM_001162977, intron 4 of 36) intron (NM_001162977, intron 4 of 36) 56330 NM_001162977 230971 Mm.275216 NM_172273 ENSMUSG00000057751 Megf6 2600001P17Rik|Egfl3 multiple EGF-like-domains 6 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-17 chr15 12349562 12349759 + 1.31827279259406 NA exon (NM_025673, exon 4 of 4) exon (NM_025673, exon 4 of 4) 28164 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-57 chr8 34214555 34214887 + 1.31827279259406 NA Intergenic Intergenic -48009 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak2_13_7_0.538754073365169_3.26937703668258_1.31827279259406-2 chr4 152177713 152177943 + 1.31827279259406 NA promoter-TSS (NM_133348) promoter-TSS (NM_133348) -272 NM_133348 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-5 chr4 89293051 89293383 + 1.31827279259406 NA intron (NM_009877, intron 1 of 2) intron (NM_009877, intron 1 of 2) 1402 NM_009877 12578 Mm.4733 NM_009877 ENSMUSG00000044303 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19|p19ARF cyclin dependent kinase inhibitor 2A protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-15 chr16 43235938 43236185 + 1.31827279259406 NA intron (NM_001285805, intron 3 of 10) intron (NM_001285805, intron 3 of 10) -11223 NM_181058 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288 zinc finger and BTB domain containing 20 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-47 chr5 125247385 125247595 + 1.31827279259406 NA Intergenic Intergenic -68276 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-29 chr3 54358108 54358406 + 1.31827279259406 NA Intergenic Intergenic -2850 NM_001198766 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-33 chr2 49349214 49349433 + 1.31827279259406 NA Intergenic Intergenic -102163 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-8 chr11 116825652 116825890 + 1.31827279259406 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 2275 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-2 chr11 53567541 53567728 + 1.31827279259406 NA intron (NM_008443, intron 1 of 17) CpG 265 NM_001290806 16568 Mm.88694 NM_008443 ENSMUSG00000018395 Kif3a Kif3|Kifl|Kns3 kinesin family member 3A protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-27 chr19 43938534 43938763 + 1.31827279259406 NA intron (NM_028029, intron 1 of 15) intron (NM_028029, intron 1 of 15) 1550 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-29 chr6 50528203 50528565 + 1.31827279259406 NA Intergenic B4|SINE|B4 38090 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-39 chr8 45608307 45608568 + 1.31827279259406 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -19314 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-34 chr8 57513082 57513284 + 1.31827279259406 NA exon (NM_008252, exon 3 of 5) exon (NM_008252, exon 3 of 5) 1340 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-18 chr17 6654478 6654733 + 1.31827279259406 NA intron (NM_001166630, intron 1 of 4).2 intron (NM_001166630, intron 1 of 4).2 1226 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406 chr1 43362029 43362234 + 1.31827279259406 NA Intergenic Intergenic -83620 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-35 chr4 66378400 66378661 + 1.31827279259406 NA intron (NM_207109, intron 1 of 22) intron (NM_207109, intron 1 of 22) 25953 NM_019514 56079 Mm.445312 NM_019514 ENSMUSG00000028373 Astn2 1d8|Astnl|bM452J22.1 astrotactin 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-9 chr11 96748626 96748916 + 1.31827279259406 NA intron (NM_001177898, intron 10 of 10) PB1D7|SINE|Alu 28784 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak2_13_7_0.538754073365169_3.26937703668258_1.31827279259406 chr2 168424563 168424769 + 1.31827279259406 NA Intergenic Intergenic -155335 NM_001081134 241794 Mm.425102 NM_001081134 ENSMUSG00000074575 Kcng1 AW536275 potassium voltage-gated channel, subfamily G, member 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-12 chr13 64389064 64389275 + 1.31827279259406 NA Intergenic Intergenic -18649 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-24 chr16 31291294 31291542 + 1.31827279259406 NA Intergenic Intergenic -16141 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-22 chr2 126035734 126036036 + 1.31827279259406 NA exon (NM_008008, exon 2 of 4) exon (NM_008008, exon 2 of 4) 1227 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-55 chr8 111360904 111361186 + 1.31827279259406 NA intron (NM_178086, intron 2 of 6) intron (NM_178086, intron 2 of 6) -22840 NM_029005 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-40 chr3 107831980 107832271 + 1.31827279259406 NA Intergenic Intergenic -45105 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-7 chr11 115843769 115843980 + 1.31827279259406 NA intron (NM_001252532, intron 3 of 25) intron (NM_001252532, intron 3 of 25) 19816 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-16 chr13 113453997 113454370 + 1.31827279259406 NA intron (NR_045501, intron 5 of 6) intron (NR_045501, intron 5 of 6) 48661 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-21 chr18 66328251 66328493 + 1.31827279259406 NA Intergenic Intergenic -36534 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-10 chr14 20250169 20250372 + 1.31827279259406 NA Intergenic Intergenic 18892 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-30 chr2 117746719 117746927 + 1.31827279259406 NA Intergenic Intergenic 65979 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-22 chr17 5994922 5995129 + 1.31827279259406 NA intron (NM_001357667, intron 3 of 24) intron (NM_001357667, intron 3 of 24) -12555 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-32 chr5 31876854 31877081 + 1.31827279259406 NA intron (NM_144541, intron 6 of 11) intron (NM_144541, intron 6 of 11) 178917 NM_144541 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Babam2 6030405P19Rik|AI429776|B830038C02Rik|Bre BRISC and BRCA1 A complex member 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-50 chr7 72520293 72520487 + 1.31827279259406 NA Intergenic Intergenic -213795 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-2 chr1 72029848 72030164 + 1.31827279259406 NA Intergenic Intergenic -24811 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-11 chr14 76913159 76913463 + 1.31827279259406 NA Intergenic Intergenic 123306 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-48 chr6 134671780 134671998 + 1.31827279259406 NA intron (NM_001170479, intron 2 of 3) MER20B|DNA|hAT-Charlie 30949 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-17 chr17 5576077 5576290 + 1.31827279259406 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 83583 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-31 chr6 92381796 92382056 + 1.31827279259406 NA intron (NM_001134461, intron 7 of 7) intron (NM_001134461, intron 7 of 7) 99466 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-18 chr14 25603220 25603462 + 1.31827279259406 NA promoter-TSS (NM_001309430) promoter-TSS (NM_001309430) -172 NM_001309430 100188919 Mm.473810 NM_001309430 Gm45915 Israa predicted gene, 45915 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-22 chr19 3833269 3833485 + 1.31827279259406 NA Intergenic Intergenic -18396 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-14 chr15 73247045 73247263 + 1.31827279259406 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 7728 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-22 chr15 78301189 78301449 + 1.31827279259406 NA intron (NM_001287389, intron 1 of 11) intron (NM_001287389, intron 1 of 11) 4402 NM_007781 12984 Mm.1940 NM_007781 ENSMUSG00000071714 Csf2rb2 AIC2A|BetaIl3|Bil3|Csfgmrb|Il3r|Il3rb|Il3rb2 colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-38 chr4 143305766 143305982 + 1.31827279259406 NA Intergenic Intergenic -6310 NM_001290822 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-11 chr12 80224661 80224872 + 1.31827279259406 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 35605 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-58 chr9 61404523 61404821 + 1.31827279259406 NA intron (NM_001083928, intron 8 of 19) (CCCCAA)n|Simple_repeat|Simple_repeat 32306 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-7 chr12 118848499 118848795 + 1.31827279259406 NA exon (NM_177082, exon 3 of 3) exon (NM_177082, exon 3 of 3) 2318 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-2 chr13 80883710 80883936 + 1.31827279259406 NA non-coding (NR_153410, exon 1 of 8) non-coding (NR_153410, exon 1 of 8) 401 NM_001042591 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-36 chr7 47072421 47072633 + 1.31827279259406 NA Intergenic Intergenic 10697 NR_106023 102465639 NR_106023 ENSMUSG00000098960 Mir7056 Gm27696|mmu-mir-7056 microRNA 7056 ncRNA unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-30 chr6 84180538 84180838 + 1.31827279259406 NA intron (NM_001077694, intron 41 of 54) intron (NM_001077694, intron 41 of 54) 161302 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-16 chr15 11644807 11645041 + 1.31827279259406 NA Intergenic Intergenic -245266 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-3 chr12 111444332 111444576 + 1.31827279259406 NA intron (NM_009396, intron 1 of 11) intron (NM_009396, intron 1 of 11) 1793 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-34 chr2 51986476 51986679 + 1.31827279259406 NA Intergenic Intergenic -13369 NM_001141948 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-6 chr11 86595267 86595540 + 1.31827279259406 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -11245 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-46 chr4 155267586 155267848 + 1.31827279259406 NA exon (NM_008860, exon 16 of 18) exon (NM_008860, exon 16 of 18) 17751 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-3 chr13 42382596 42382808 + 1.31827279259406 NA Intergenic Intergenic 81226 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-9 chrX 77511720 77511938 + 1.31827279259406 NA intron (NM_020601, intron 1 of 15) intron (NM_020601, intron 1 of 15) 602 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-26 chr5 66405556 66405800 + 1.31827279259406 NA intron (NM_001201414, intron 5 of 15) intron (NM_001201414, intron 5 of 15) -68013 NM_001201416 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-56 chr7 143830370 143830570 + 1.31827279259406 NA intron (NM_007856, intron 2 of 8) intron (NM_007856, intron 2 of 8) 7303 NM_007856 13360 Mm.249342 NM_007856 ENSMUSG00000058454 Dhcr7 AA409147 7-dehydrocholesterol reductase protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-3 chr1 55236667 55236893 + 1.31827279259406 NA promoter-TSS (NM_175439) promoter-TSS (NM_175439) -397 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-45 chr4 150853498 150853817 + 1.31827279259406 NA promoter-TSS (NM_001356323) promoter-TSS (NM_001356323) -139 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-63 chr9 72715968 72716246 + 1.31827279259406 NA intron (NM_010890, intron 9 of 28) intron (NM_010890, intron 9 of 28) 22809 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-33 chr6 31076358 31076646 + 1.31827279259406 NA Intergenic Intergenic -13409 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-57 chr9 56106121 56106362 + 1.31827279259406 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 16265 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-31 chr2 25428888 25429120 + 1.31827279259406 NA intron (NM_007379, intron 1 of 47) CpG 330 NM_007379 11305 Mm.2210 NM_007379 ENSMUSG00000026944 Abca2 AI413825|Abc2|D2H0S1474E|mKIAA1062 ATP-binding cassette, sub-family A (ABC1), member 2 protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-11 chr5 31582653 31582884 + 1.31827279259406 NA Intergenic Intergenic -11371 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-32 chr7 72513462 72513695 + 1.31827279259406 NA Intergenic Intergenic -206983 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-33 chr3 65925238 65925447 + 1.31827279259406 NA Intergenic Intergenic 32907 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-10 chr11 97442903 97443142 + 1.31827279259406 NA Intergenic Intergenic -7138 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-19 chr16 93597322 93597572 + 1.31827279259406 NA intron (NM_145482, intron 4 of 11) intron (NM_145482, intron 4 of 11) 6368 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-38 chr2 144459110 144459325 + 1.31827279259406 NA promoter-TSS (NR_033459) promoter-TSS (NR_033459) -63 NR_033459 668917 Mm.152805 NR_033459 ENSMUSG00000083674 Zfp133-ps Zfp133 zinc finger protein 133, pseudogene pseudo unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-60 chr9 64018950 64019161 + 1.31827279259406 NA intron (NM_008542, intron 1 of 3) intron (NM_008542, intron 1 of 3) 3004 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-49 chr6 22269893 22270210 + 1.31827279259406 NA Intergenic Intergenic -18176 NM_053116 93735 Mm.137403 NM_053116 ENSMUSG00000029671 Wnt16 E130309I19Rik wingless-type MMTV integration site family, member 16 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-16 chr17 33978463 33978822 + 1.31827279259406 NA intron (NR_004446, intron 1 of 5) CpG-6269 149 NR_004446 630499 Mm.440940 NM_001081015 H2-K2 EG630499|Gm7035|H-2K1|H-2K1K|H-2K2|H2-K1 histocompatibility 2, K region locus 2 pseudo unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-3 chr1 127425205 127425465 + 1.31827279259406 NA intron (NM_145128, intron 12 of 17) intron (NM_145128, intron 12 of 17) 220349 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_14_7_0.637587524772373_3.31879376238619_1.31827279259406 chr4 45972392 45972624 + 1.31827279259406 NA promoter-TSS (NM_001355189) promoter-TSS (NM_001355189) 211 NM_146142 100121 Mm.275413 NM_146142 ENSMUSG00000035517 Tdrd7 5730495N10Rik|AI447470|PCTAIRE2BP tudor domain containing 7 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-29 chr2 84726625 84726884 + 1.31827279259406 NA intron (NM_133840, intron 1 of 2) intron (NM_133840, intron 1 of 2) 514 NM_133840 98985 Mm.21583 NM_133840 ENSMUSG00000027079 Clp1 AI462438|Heab CLP1, cleavage and polyadenylation factor I subunit protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-25 chr18 62546232 62546516 + 1.31827279259406 NA intron (NM_001361089, intron 1 of 22) intron (NM_001361089, intron 1 of 22) 2489 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-42 chr4 136582016 136582280 + 1.31827279259406 NA intron (NM_001347221, intron 2 of 19) intron (NM_001347221, intron 2 of 19) 20575 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-8 chr13 49183266 49183553 + 1.31827279259406 NA Intergenic Intergenic -4138 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-15 chr14 70309964 70310219 + 1.31827279259406 NA exon (NM_001135152, exon 7 of 10) exon (NM_001135152, exon 7 of 10) -20594 NM_001304992 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-4 chr13 69591428 69591644 + 1.31827279259406 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 19927 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-27 chr5 138694345 138694557 + 1.31827279259406 NA Intergenic Intergenic -60630 NM_030565 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406 chr10 80674774 80675057 + 1.31827279259406 NA intron (NM_021462, intron 2 of 13) intron (NM_021462, intron 2 of 13) 1378 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-2 chr13 17215537 17215737 + 1.31827279259406 NA intron (NM_138654, intron 12 of 13) intron (NM_138654, intron 12 of 13) 479128 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-49 chr7 35118113 35118329 + 1.31827279259406 NA Intergenic CpG -1072 NM_001287521 12606 Mm.349667 NM_007678 ENSMUSG00000034957 Cebpa C/ebpalpha|CBF-A|Cebp CCAAT/enhancer binding protein (C/EBP), alpha protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-55 chr7 132981220 132981434 + 1.31827279259406 NA exon (NM_001362198, exon 8 of 11) exon (NM_001362198, exon 8 of 11) 33920 NM_001170744 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-28 chr3 15200601 15200919 + 1.31827279259406 NA Intergenic Intergenic 131542 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-14 chr14 69612794 69613062 + 1.31827279259406 NA intron (NM_033325, intron 1 of 13) intron (NM_033325, intron 1 of 13) 3452 NM_033325 94352 Mm.116714 NM_033325 ENSMUSG00000034205 Loxl2 1110004B06Rik|4930526G11Rik|9430067E15Rik lysyl oxidase-like 2 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-35 chr2 58711167 58711398 + 1.31827279259406 NA intron (NM_001289660, intron 1 of 7) intron (NM_001289660, intron 1 of 7) -43902 NM_001289659 76654 Mm.200370 NM_029692 ENSMUSG00000026839 Upp2 1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-43 chr9 96844218 96844535 + 1.31827279259406 NA intron (NM_153420, intron 3 of 6) intron (NM_153420, intron 3 of 6) 45098 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-13 chr15 64541664 64541866 + 1.31827279259406 NA Intergenic Intergenic -158846 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-9 chr10 80577474 80577760 + 1.31827279259406 NA promoter-TSS (NM_078477) promoter-TSS (NM_078477) -321 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-20 chr16 97897332 97897554 + 1.31827279259406 NA intron (NM_174847, intron 2 of 13) intron (NM_174847, intron 2 of 13) -20152 NR_105929 102465581 NR_105929 ENSMUSG00000105138 Mir6964 mmu-mir-6964 microRNA 6964 ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-12 chr15 27418417 27418651 + 1.31827279259406 NA Intergenic MTE2a|LTR|ERVL-MaLR -48143 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-35 chr8 106151006 106151238 + 1.31827279259406 NA intron (NM_001357319, intron 1 of 5) intron (NM_001357319, intron 1 of 5) 768 NM_001357319 192654 Mm.284770 NM_133792 ENSMUSG00000031903 Pla2g15 ACS|C87498|LLPL|Lpla2|Lypla3 phospholipase A2, group XV protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-31 chr2 152739372 152739596 + 1.31827279259406 NA Intergenic CpG 3233 NM_001355113 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-61 chr9 23168665 23168886 + 1.31827279259406 NA Intergenic Intergenic -54301 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-6 chr17 70730984 70731206 + 1.31827279259406 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 115682 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-19 chr18 80558773 80559065 + 1.31827279259406 NA Intergenic Intergenic -14373 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406 chr1 44582584 44582868 + 1.31827279259406 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 31055 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-48 chr5 147315154 147315424 + 1.31827279259406 NA exon (NM_001039678, exon 2 of 2) exon (NM_001039678, exon 2 of 2) 7151 NM_001039678 231903 Mm.291286 NM_001039678 ENSMUSG00000075543 Urad EG231903|Prhoxnb ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5) decarboxylase protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-2 chr1 62724730 62724943 + 1.31827279259406 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 21519 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-38 chr8 45574881 45575163 + 1.31827279259406 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -52729 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-4 chr2 167835022 167835238 + 1.31827279259406 NA Intergenic Intergenic -97197 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-64 chr9 106390803 106391065 + 1.31827279259406 NA Intergenic Intergenic 22302 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding unique_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-20 chr2 117928868 117929105 + 1.31827279259406 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 107058 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-32 chr2 36213535 36213749 + 1.31827279259406 NA Intergenic Intergenic -16784 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-44 chr4 150507965 150508288 + 1.31827279259406 NA intron (NM_001085492, intron 8 of 22) intron (NM_001085492, intron 8 of 22) 144048 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406 chr10 86109394 86109595 + 1.31827279259406 NA intron (NR_038024, intron 2 of 2) intron (NR_038024, intron 2 of 2) 13640 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-46 chr6 55439645 55439999 + 1.31827279259406 NA Intergenic Intergenic -12156 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding common_peak2_7_12_-0.963344694350052_3.21876737096607_1.31827279259406-5 chr4 87850585 87850953 + 1.31827279259406 NA intron (NM_027326, intron 4 of 10) intron (NM_027326, intron 4 of 10) -44446 NM_029931 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-54 chr7 89623452 89623654 + 1.31827279259406 NA Intergenic Intergenic -9265 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-52 chr7 144063123 144063473 + 1.31827279259406 NA Intergenic ID_B1|SINE|B4 54044 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-13 chr13 42367915 42368128 + 1.31827279259406 NA Intergenic Intergenic 66545 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-23 chr17 30197097 30197287 + 1.31827279259406 NA intron (NM_001356265, intron 5 of 5) intron (NM_001356265, intron 5 of 5) 192153 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-39 chr3 29809951 29810184 + 1.31827279259406 NA Intergenic Intergenic -80950 NR_110437 102636083 NR_110437 ENSMUSG00000102590 Mannr Manr Mecom adjacent non-protein coding RNA ncRNA unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-23 chr15 81072510 81072714 + 1.31827279259406 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 32435 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-11 chr12 70712027 70712301 + 1.31827279259406 NA Intergenic Intergenic -113350 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-5 chr10 93190649 93190884 + 1.31827279259406 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 27981 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-20 chr18 65694030 65694251 + 1.31827279259406 NA Intergenic Intergenic -4128 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak2_8_12_-0.794618510321899_3.30313046298014_1.31827279259406-35 chr7 34268979 34269232 + 1.31827279259406 NA intron (NM_172741, intron 1 of 12) intron (NM_172741, intron 1 of 12) 16504 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-36 chr4 107012277 107012553 + 1.31827279259406 NA intron (NM_198438, intron 5 of 16) intron (NM_198438, intron 5 of 16) 54451 NM_025500 56280 Mm.29517 NM_025500 ENSMUSG00000028622 Mrpl37 2300004O14Rik|AI132596|MRP-L2|Rpml2 mitochondrial ribosomal protein L37 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-16 chr15 5143500 5143694 + 1.31827279259406 NA promoter-TSS (NM_001355640) promoter-TSS (NM_001355640) -264 NM_001013367 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-7 chr8 36724765 36725065 + 1.31827279259406 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 8139 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-4 chr1 90288399 90288591 + 1.31827279259406 NA Intergenic Intergenic 84515 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak1_13_7_0.538754073365169_3.26937703668258_1.31827279259406-41 chr4 57770261 57770452 + 1.31827279259406 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -74892 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak1_14_7_0.637587524772373_3.31879376238619_1.31827279259406-5 chr17 12194777 12194974 + 1.31827279259406 NA intron (NM_026644, intron 2 of 8) intron (NM_026644, intron 2 of 8) 75591 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak1_8_12_-0.794618510321899_3.30313046298014_1.31827279259406 chr1 186579926 186580298 + 1.31827279259406 NA Intergenic PB1D10|SINE|Alu -21431 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_30_44_-0.814348577203648_5.08467880772785_1.3174917037782 chr12 36381471 36382119 + 1.3174917037782 NA promoter-TSS (NM_001289503) promoter-TSS (NM_001289503) 345 NM_178629 75847 Mm.261764 NM_178629 ENSMUSG00000043153 Ispd 4930579E17Rik|AV040780 isoprenoid synthase domain containing protein-coding common_peak2_31_44_-0.768868031685123_5.10741908048711_1.3174917037782-2 chr13 17694140 17694743 + 1.3174917037782 NA promoter-TSS (NM_025479) promoter-TSS (NM_025479) 324 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_30_44_-0.814348577203648_5.08467880772785_1.3174917037782 chr11 117823845 117824545 + 1.3174917037782 NA intron (NM_001271729, intron 2 of 5) intron (NM_001271729, intron 2 of 5) -1724 NM_027827 71562 Mm.273958 NM_027827 ENSMUSG00000017718 Afmid 9030621K19Rik|Ammd|FKF|KFA|Kf|formylase arylformamidase protein-coding common_peak2_30_44_-0.814348577203648_5.08467880772785_1.3174917037782-2 chr17 29436849 29437348 + 1.3174917037782 NA Intergenic Intergenic -53947 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak2_31_44_-0.768868031685123_5.10741908048711_1.3174917037782 chr4 130014504 130015293 + 1.3174917037782 NA intron (NM_001290714, intron 21 of 27) intron (NM_001290714, intron 21 of 27) 22844 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak2_30_44_-0.814348577203648_5.08467880772785_1.3174917037782-3 chr5 34989867 34990346 + 1.3174917037782 NA intron (NM_173402, intron 3 of 16) intron (NM_173402, intron 3 of 16) -8972 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak1_30_44_-0.814348577203648_5.08467880772785_1.3174917037782-2 chr5 25222950 25223463 + 1.3174917037782 NA intron (NM_144908, intron 1 of 11) intron (NM_144908, intron 1 of 11) 334 NM_144908 231050 Mm.246718 NM_144908 ENSMUSG00000038072 Galnt11 A430075I06Rik|AI648252|E430002F06Rik polypeptide N-acetylgalactosaminyltransferase 11 protein-coding common_peak2_31_44_-0.768868031685123_5.10741908048711_1.3174917037782 chr11 82870478 82871180 + 1.3174917037782 NA promoter-TSS (NM_001164570) promoter-TSS (NM_001164570) -85 NM_001164570 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak2_52_26_0.690882553106392_5.10032877871666_1.31749170377819 chr15 84232705 84233257 + 1.31749170377819 NA intron (NM_133167, intron 1 of 12) intron (NM_133167, intron 1 of 12) 938 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak1_53_26_0.717659348736691_5.11371717653181_1.31749170377819-3 chr18 46311362 46311840 + 1.31749170377819 NA intron (NM_001160399, intron 1 of 9) intron (NM_001160399, intron 1 of 9) 327 NM_001160399 240261 Mm.329416 NM_001160399 ENSMUSG00000071855 Ccdc112 8430438M01Rik|AW108467 coiled-coil domain containing 112 protein-coding common_peak2_53_26_0.717659348736691_5.11371717653181_1.31749170377819-2 chr1 171345808 171346180 + 1.31749170377819 NA promoter-TSS (NM_012049) promoter-TSS (NM_012049) 319 NM_011070 18637 Mm.10756 NM_011070 ENSMUSG00000006412 Pfdn2 ESTM27|W48336 prefoldin 2 protein-coding common_peak2_52_26_0.690882553106392_5.10032877871666_1.31749170377819-2 chr3 81018096 81018487 + 1.31749170377819 NA Intergenic Intergenic -18125 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_53_26_0.717659348736691_5.11371717653181_1.31749170377819-4 chr6 37430701 37430947 + 1.31749170377819 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 11324 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_52_26_0.690882553106392_5.10032877871666_1.31749170377819-3 chr6 72788732 72789351 + 1.31749170377819 NA promoter-TSS (NM_009332) promoter-TSS (NM_009332) 4 NM_001079822 21415 Mm.440067 NM_009332 ENSMUSG00000055799 Tcf7l1 Tcf-3|Tcf3|bHLHb21 transcription factor 7 like 1 (T cell specific, HMG box) protein-coding common_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819-4 chr5 64867518 64867850 + 1.31749170377819 NA Intergenic Intergenic 64161 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819 chr10 127290828 127291357 + 1.31749170377819 NA intron (NM_001290183, intron 1 of 2) intron (NM_001290183, intron 1 of 2) 299 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak2_53_26_0.717659348736691_5.11371717653181_1.31749170377819 chr1 73998248 73998983 + 1.31749170377819 NA intron (NM_001289895, intron 6 of 32) intron (NM_001289895, intron 6 of 32) 125832 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_53_26_0.717659348736691_5.11371717653181_1.31749170377819-3 chr3 95479296 95479694 + 1.31749170377819 NA intron (NM_001037737, intron 8 of 21) intron (NM_001037737, intron 8 of 21) -19715 NM_007802 13038 Mm.272085 NM_007802 ENSMUSG00000028111 Ctsk AI323530|MMS10-Q|Ms10q|catK cathepsin K protein-coding unique_peak1_53_26_0.717659348736691_5.11371717653181_1.31749170377819-2 chr8 111780164 111780718 + 1.31749170377819 NA intron (NM_011801, intron 5 of 6) intron (NM_011801, intron 5 of 6) -36592 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819-2 chr2 140670418 140671343 + 1.31749170377819 NA intron (NM_001172160, intron 1 of 2) intron (NM_001172160, intron 1 of 2) 596 NM_001172160 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819-2 chr2 125263336 125264310 + 1.31749170377819 NA Intergenic Intergenic 16308 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819 chr2 13543209 13544250 + 1.31749170377819 NA intron (NM_010067, intron 1 of 10) intron (NM_010067, intron 1 of 10) 935 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding unique_peak1_53_26_0.717659348736691_5.11371717653181_1.31749170377819 chr6 86472612 86473227 + 1.31749170377819 NA intron (NR_131126, intron 1 of 2) intron (NR_131126, intron 1 of 2) 7911 NR_131125 320486 Mm.391625 NR_131125 ENSMUSG00000085589 A430078I02Rik T25621 RIKEN cDNA A430078I02 gene ncRNA common_peak1_53_26_0.717659348736691_5.11371717653181_1.31749170377819 chr10 84700498 84701164 + 1.31749170377819 NA intron (NM_027423, intron 23 of 27) intron (NM_027423, intron 23 of 27) -55217 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding common_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819-5 chr6 128133585 128134583 + 1.31749170377819 NA intron (NM_175414, intron 1 of 8) intron (NM_175414, intron 1 of 8) 9494 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak1_52_26_0.690882553106392_5.10032877871666_1.31749170377819-3 chr2 164430757 164431511 + 1.31749170377819 NA intron (NM_011521, intron 2 of 4) intron (NM_011521, intron 2 of 4) 12054 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_53_26_0.717659348736691_5.11371717653181_1.31749170377819-2 chr12 64965819 64966298 + 1.31749170377819 NA promoter-TSS (NM_025707) promoter-TSS (NM_025707) 316 NM_177805 328108 Mm.138465 NM_177805 ENSMUSG00000035614 Togaram1 A430041B07Rik|BC062107|C130034K06|Fam179b|mKIAA0423 TOG array regulator of axonemal microtubules 1 protein-coding common_peak2_44_58_-0.671274901935258_5.54700559839421_1.31742449843084-3 chr19 16250407 16251029 + 1.31742449843084 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 64286 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_44_58_-0.671274901935258_5.54700559839421_1.31742449843084 chr10 111972778 111973328 + 1.31742449843084 NA intron (NM_178610, intron 1 of 9) CpG 358 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak2_44_58_-0.671274901935258_5.54700559839421_1.31742449843084-4 chr9 109073773 109074411 + 1.31742449843084 NA promoter-TSS (NM_172774) promoter-TSS (NM_172774) 5 NR_153412 111828493 NR_153412 Atrip-trex1 - Atrip-Trex1 readthrough ncRNA common_peak2_44_58_-0.671274901935258_5.54700559839421_1.31742449843084-2 chr11 70193756 70194161 + 1.31742449843084 NA Intergenic Intergenic -19952 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding unique_peak1_70_37_0.616693228263146_5.55627412757516_1.31742449843083 chr3 95738509 95739354 + 1.31742449843083 NA intron (NM_007899, intron 1 of 10) intron (NM_007899, intron 1 of 10) 638 NM_007899 13601 Mm.3433 NM_007899 ENSMUSG00000028108 Ecm1 AI663821|p85 extracellular matrix protein 1 protein-coding common_peak1_70_37_0.616693228263146_5.55627412757516_1.31742449843083 chr7 105621436 105622088 + 1.31742449843083 NA intron (NM_001360425, intron 2 of 11) intron (NM_001360425, intron 2 of 11) 11809 NM_018880 55992 Mm.29290 NM_018880 ENSMUSG00000036989 Trim3 BERP1|HAC1|Rnf22 tripartite motif-containing 3 protein-coding common_peak1_89_50_0.531887825881844_5.93836925491242_1.31610797477368-2 chr15 75841195 75841870 + 1.31610797477368 NA intron (NM_172121, intron 1 of 11) intron (NM_172121, intron 1 of 11) 376 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak1_89_50_0.531887825881844_5.93836925491242_1.31610797477368 chr1 53784236 53785195 + 1.31610797477368 NA intron (NM_133810, intron 1 of 7) intron (NM_133810, intron 1 of 7) 500 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_89_50_0.531887825881844_5.93836925491242_1.31610797477368-3 chr2 117710269 117711394 + 1.31610797477368 NA Intergenic Intergenic 101971 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_60_74_-0.581662621193004_5.93798737989938_1.31610797477367 chr8 117158107 117158762 + 1.31610797477367 NA intron (NM_001081151, intron 1 of 10) CpG 299 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak2_138_149_-0.401841639112794_7.02789787093948_1.31546404827132 chr1 88701078 88702757 + 1.31546404827132 NA 5' UTR (NM_177305, exon 1 of 1) 5' UTR (NM_177305, exon 1 of 1) 274 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-10 chr9 63709996 63710507 + 1.31435121412491 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 47743 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491-5 chr4 133624421 133625019 + 1.31435121412491 NA intron (NM_001017968, intron 2 of 7) intron (NM_001017968, intron 2 of 7) 8709 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-7 chr13 33090126 33090498 + 1.31435121412491 NA intron (NM_173052, intron 4 of 6) intron (NM_173052, intron 4 of 6) 6209 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-18 chr5 31202631 31203269 + 1.31435121412491 NA promoter-TSS (NM_175311) promoter-TSS (NM_175311) -647 NM_175311 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-14 chr2 34546406 34546872 + 1.31435121412491 NA intron (NM_001290625, intron 7 of 11) intron (NM_001290625, intron 7 of 11) 139788 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491 chr10 72634637 72634981 + 1.31435121412491 NA Intergenic Intergenic -20037 NM_025635 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491 chr1 134277465 134277841 + 1.31435121412491 NA Intergenic Intergenic -12351 NM_031189 17928 Mm.16528 NM_031189 ENSMUSG00000026459 Myog MYF4|bHLHc3|myo myogenin protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-6 chr12 80032066 80032503 + 1.31435121412491 NA Intergenic Intergenic 80729 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-8 chr8 11950803 11951177 + 1.31435121412491 NA Intergenic Intergenic 110469 NM_029326 75528 Mm.440342 NM_029326 ENSMUSG00000031512 Tex29 1700018L24Rik testis expressed 29 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-3 chr16 24473964 24474384 + 1.31435121412491 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) 26083 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491-2 chr2 25176155 25176499 + 1.31435121412491 NA Intergenic Intergenic -4431 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-5 chr6 42297364 42297948 + 1.31435121412491 NA intron (NM_013491, intron 7 of 22) intron (NM_013491, intron 7 of 22) 10971 NM_013491 12723 Mm.386757 NM_013491 ENSMUSG00000029862 Clcn1 Clc-1|Clc1|SMCC1|adr|mto|myotonia|nmf355 chloride channel, voltage-sensitive 1 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-15 chr2 117959764 117960143 + 1.31435121412491 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 138025 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491 chr10 111824679 111825280 + 1.31435121412491 NA Intergenic Intergenic 49397 NR_046029 629206 Mm.391444 NR_046029 ENSMUSG00000112533 Gm20758 - predicted gene, 20758 ncRNA unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-16 chr2 131508545 131509050 + 1.31435121412491 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 16935 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-5 chr2 4477738 4478050 + 1.31435121412491 NA intron (NM_001177843, intron 3 of 23) intron (NM_001177843, intron 3 of 23) 76918 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_29_12_0.930092827058037_4.16548613167011_1.31435121412491 chr13 49213042 49213372 + 1.31435121412491 NA intron (NM_026738, intron 1 of 5) intron (NM_026738, intron 1 of 5) 2819 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491 chr1 36254426 36255006 + 1.31435121412491 NA Intergenic Intergenic -10414 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-9 chr14 73325974 73326469 + 1.31435121412491 NA promoter-TSS (NM_009029) promoter-TSS (NM_009029) -399 NM_009029 19645 Mm.273862 NM_009029 ENSMUSG00000022105 Rb1 Rb|Rb-1|pRb|pp105 RB transcriptional corepressor 1 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-6 chr4 111425005 111425338 + 1.31435121412491 NA intron (NR_033793, intron 1 of 5) intron (NR_033793, intron 1 of 5) 10165 NM_026279 67621 Mm.45533 NM_026279 ENSMUSG00000028545 Bend5 2310026E23Rik BEN domain containing 5 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-4 chr1 162186593 162186996 + 1.31435121412491 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -30829 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491-3 chr18 31910255 31910602 + 1.31435121412491 NA 3' UTR (NM_026006, exon 1 of 1) 3' UTR (NM_026006, exon 1 of 1) 1475 NM_026006 67158 Mm.31537 NM_026006 ENSMUSG00000044982 Sft2d3 2610206C24Rik|AI847965|AW046173 SFT2 domain containing 3 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-17 chr2 163815589 163816023 + 1.31435121412491 NA Intergenic Intergenic -5028 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-3 chr4 45458640 45459017 + 1.31435121412491 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -50062 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-13 chr19 42752154 42752591 + 1.31435121412491 NA exon (NM_029011, exon 1 of 16) exon (NM_029011, exon 1 of 16) 403 NM_029011 74580 Mm.329858 NM_029011 ENSMUSG00000060224 Pyroxd2 3830409H07Rik|4833409A17Rik pyridine nucleotide-disulphide oxidoreductase domain 2 protein-coding unique_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491 chr13 31559574 31559870 + 1.31435121412491 NA exon (NM_008239, exon 1 of 1) exon (NM_008239, exon 1 of 1) 1552 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding common_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-2 chr17 79715347 79715679 + 1.31435121412491 NA promoter-TSS (NM_009994) promoter-TSS (NM_009994) -472 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_29_12_0.930092827058037_4.16548613167011_1.31435121412491-2 chr14 30594206 30594507 + 1.31435121412491 NA TTS (NM_001310682) TTS (NM_001310682) 15954 NM_001310682 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding unique_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491-4 chr19 28592340 28592725 + 1.31435121412491 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -85692 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-10 chr16 38792646 38793206 + 1.31435121412491 NA intron (NM_178924, intron 1 of 7) intron (NM_178924, intron 1 of 7) 7277 NM_178924 22268 Mm.130793 NM_178924 ENSMUSG00000049436 Upk1b AI413235|Tspan20|UPIb|Upk1 uroplakin 1B protein-coding common_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-3 chr4 45468471 45468927 + 1.31435121412491 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -59933 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-11 chr16 93591393 93591794 + 1.31435121412491 NA intron (NM_145482, intron 6 of 11) intron (NM_145482, intron 6 of 11) 12222 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding common_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-4 chr4 126533174 126533747 + 1.31435121412491 NA promoter-TSS (NM_153177) promoter-TSS (NM_153177) -2 NM_153177 76850 Mm.86705 NM_153177 ENSMUSG00000042500 Ago4 5730550L01Rik|AI481660|Eif2c4 argonaute RISC catalytic subunit 4 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-4 chr17 36042075 36042473 + 1.31435121412491 NA promoter-TSS (NM_001034909) promoter-TSS (NM_001034909) 418 NM_010399 15051 Mm.195061 NM_010399 H2-T9 H-2T9 histocompatibility 2, T region locus 9 protein-coding common_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491 chr1 162093004 162093406 + 1.31435121412491 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 88236 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA common_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-4 chr5 92708104 92708589 + 1.31435121412491 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 24911 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-12 chr19 38819368 38819668 + 1.31435121412491 NA promoter-TSS (NM_021315) promoter-TSS (NM_021315) -281 NM_021315 57753 Mm.86482 NM_021315 ENSMUSG00000024999 Noc3l AF233884|Fad24 NOC3 like DNA replication regulator protein-coding common_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-5 chrX 96098736 96099083 + 1.31435121412491 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 2864 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491-2 chr14 30593459 30593849 + 1.31435121412491 NA Intergenic Intergenic 16656 NM_001310682 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-20 chr7 45679208 45679611 + 1.31435121412491 NA exon (NM_001271578, exon 4 of 4) exon (NM_001271578, exon 4 of 4) -4613 NM_001358870 243967 Mm.291240 NM_001033356 ENSMUSG00000070564 Ntn5 Gm484 netrin 5 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-19 chr6 83439852 83440439 + 1.31435121412491 NA intron (NM_001347313, intron 3 of 11) intron (NM_001347313, intron 3 of 11) 1533 NM_183138 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-5 chr12 9176576 9177040 + 1.31435121412491 NA Intergenic Intergenic 146811 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-9 chr8 73310404 73310738 + 1.31435121412491 NA intron (NM_010687, intron 1 of 14) MT2B2|LTR|ERVL 42969 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-6 chr9 41515555 41515788 + 1.31435121412491 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) -15754 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA common_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-2 chr13 45961711 45961983 + 1.31435121412491 NA intron (NM_001199304, intron 1 of 6) intron (NM_001199304, intron 1 of 6) 3144 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-21 chr9 79793670 79793943 + 1.31435121412491 NA promoter-TSS (NM_133718) promoter-TSS (NM_133718) 165 NR_040734 74633 Mm.262175 NR_040734 ENSMUSG00000086918 4930429F24Rik - RIKEN cDNA 4930429F24 gene ncRNA unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-8 chr13 70800867 70801375 + 1.31435121412491 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 40690 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_13_25_-1.16168564477592_4.11959689575313_1.31435121412491-6 chrX 74270331 74270571 + 1.31435121412491 NA promoter-TSS (NM_052835) promoter-TSS (NM_052835) -365 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-7 chr6 55351522 55351854 + 1.31435121412491 NA Intergenic Intergenic 15389 NM_007472 11826 Mm.18625 NM_007472 ENSMUSG00000004655 Aqp1 CHIP28 aquaporin 1 protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-3 chr1 74051353 74051921 + 1.31435121412491 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 72810 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak2_14_25_-1.06285219336872_4.16901362145673_1.31435121412491-2 chr12 85185896 85186325 + 1.31435121412491 NA Intergenic Intergenic -8797 NM_008827 18654 Mm.4809 NM_008827 ENSMUSG00000004791 Pgf AI854365|PIGF|Plgf placental growth factor protein-coding unique_peak1_29_12_0.930092827058037_4.16548613167011_1.31435121412491-2 chr1 43969867 43970416 + 1.31435121412491 NA intron (NM_009418, intron 11 of 29) intron (NM_009418, intron 11 of 29) 36147 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak1_13_25_-1.16168564477592_4.11959689575313_1.31435121412491 chr7 29908517 29908811 + 1.31435121412491 NA intron (NM_001243908, intron 1 of 4) intron (NM_001243908, intron 1 of 4) 147 NM_001243908 73729 Mm.333743 NM_001243908 ENSMUSG00000099689 Zfp383 1110003H10Rik zinc finger protein 383 protein-coding common_peak2_92_105_-0.476635312782962_6.48960279817172_1.31434657520579 chr4 155943916 155944818 + 1.31434657520579 NA intron (NM_001284312, intron 1 of 7) CpG 209 NM_001284312 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak1_92_105_-0.476635312782962_6.48960279817172_1.31434657520579 chr11 86756891 86757515 + 1.31434657520579 NA intron (NM_001003908, intron 1 of 31) intron (NM_001003908, intron 1 of 31) 364 NM_001003908 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding common_peak1_127_76_0.442088564803162_6.48783082309648_1.31434657520577 chr8 27261404 27262375 + 1.31434657520577 NA intron (NM_007918, intron 1 of 2) AT_rich|Low_complexity|Low_complexity 1562 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak1_112_65_0.485928582301798_6.28735841050935_1.31434218423605 chr7 134670588 134671849 + 1.31434218423605 NA intron (NM_001033420, intron 1 of 51) CpG 531 NM_001033420 330662 Mm.436572 NM_001033420 ENSMUSG00000058325 Dock1 9130006G06Rik|AI854900|D630004B07Rik|b2b3190Clo dedicator of cytokinesis 1 protein-coding common_peak2_38_17_0.836448775240257_4.58814938906244_1.31432283146954-4 chr5 151184916 151185313 + 1.31432283146954 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 5079 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954-7 chr9 107906704 107907055 + 1.31432283146954 NA promoter-TSS (NM_009074) promoter-TSS (NM_009074) -10 NR_109782 19882 Mm.3901 NM_009074 ENSMUSG00000032584 Mst1r CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK macrophage stimulating 1 receptor (c-met-related tyrosine kinase) protein-coding common_peak2_38_17_0.836448775240257_4.58814938906244_1.31432283146954 chr10 67786085 67786455 + 1.31432283146954 NA Intergenic Intergenic 126392 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954-6 chr9 34488935 34489342 + 1.31432283146954 NA exon (NM_026324, exon 1 of 16) exon (NM_026324, exon 1 of 16) 407 NM_001190914 67703 Mm.220710 NM_026324 ENSMUSG00000032036 Kirrel3 1500010O20Rik|2900036G11Rik|NEPH2|SST4|mKIAA1867 kirre like nephrin family adhesion molecule 3 protein-coding unique_peak2_20_32_-0.924804443765829_4.58199189747554_1.31432283146954-3 chr5 77363547 77364101 + 1.31432283146954 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 44221 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954-5 chr8 61927717 61928238 + 1.31432283146954 NA promoter-TSS (NM_001293783) promoter-TSS (NM_001293783) -110 NM_001293783 234311 Mm.275233 NM_144928 ENSMUSG00000037921 Ddx60 9830118M07 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 protein-coding common_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954 chr10 122891755 122892127 + 1.31432283146954 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 93783 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_38_17_0.836448775240257_4.58814938906244_1.31432283146954-2 chr11 76060342 76060572 + 1.31432283146954 NA intron (NM_026664, intron 19 of 21) intron (NM_026664, intron 19 of 21) -32675 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding unique_peak2_20_32_-0.924804443765829_4.58199189747554_1.31432283146954-4 chr6 145340229 145340700 + 1.31432283146954 NA Intergenic B1F1|SINE|Alu -47161 NR_003625 381827 Mm.179075 NM_001001987 1700073E17Rik - ribosomal protein L7 pseudogene pseudo unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954-4 chr7 126759778 126760313 + 1.31432283146954 NA intron (NM_011952, intron 1 of 8) intron (NM_011952, intron 1 of 8) 419 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954 chr1 72778370 72778893 + 1.31432283146954 NA Intergenic Intergenic -45849 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding common_peak2_20_32_-0.924804443765829_4.58199189747554_1.31432283146954 chr9 6652258 6652755 + 1.31432283146954 NA Intergenic Intergenic -385959 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954-2 chr5 64092981 64093302 + 1.31432283146954 NA intron (NM_025700, intron 1 of 13) CpG 202 NM_001356964 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak1_20_32_-0.924804443765829_4.58199189747554_1.31432283146954-3 chr4 34882508 34882899 + 1.31432283146954 NA intron (NM_013889, intron 1 of 7) CpG 245 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954-3 chr12 102730793 102731361 + 1.31432283146954 NA Intergenic L2c|LINE|L2 12584 NM_001142937 64113 Mm.291222 NM_022323 ENSMUSG00000096458 Moap1 AA987038|Map-1|Pnma4 modulator of apoptosis 1 protein-coding unique_peak2_20_32_-0.924804443765829_4.58199189747554_1.31432283146954 chr10 111618250 111618823 + 1.31432283146954 NA Intergenic Intergenic -24263 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954 chr5 92042841 92043297 + 1.31432283146954 NA promoter-TSS (NM_016912) promoter-TSS (NM_016912) -27 NM_016912 53886 Mm.44963 NM_016912 ENSMUSG00000029403 Cdkl2 5330436L21Rik|AI505225|KKIAMRE|Kkm cyclin-dependent kinase-like 2 (CDC2-related kinase) protein-coding common_peak1_19_32_-0.994697176386779_4.54704553116506_1.31432283146954 chr15 88819023 88819233 + 1.31432283146954 NA promoter-TSS (NM_029720) promoter-TSS (NM_029720) 190 NM_001142357 223774 Mm.41512 NM_145477 ENSMUSG00000035845 Alg12 ECM39 asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase) protein-coding unique_peak2_19_32_-0.994697176386779_4.54704553116506_1.31432283146954-2 chr11 94385738 94386327 + 1.31432283146954 NA intron (NM_029600, intron 1 of 30) intron (NM_029600, intron 1 of 30) 6944 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding unique_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954-4 chr7 112331822 112332353 + 1.31432283146954 NA intron (NM_177282, intron 17 of 19) intron (NM_177282, intron 17 of 19) -36221 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_20_32_-0.924804443765829_4.58199189747554_1.31432283146954-2 chr2 5894996 5895306 + 1.31432283146954 NA intron (NM_021305, intron 1 of 11) CpG 281 NM_021305 57743 Mm.21435 NM_021305 ENSMUSG00000025816 Sec61a2 - Sec61, alpha subunit 2 (S. cerevisiae) protein-coding common_peak2_38_17_0.836448775240257_4.58814938906244_1.31432283146954-3 chr19 6233341 6233696 + 1.31432283146954 NA intron (NM_198168, intron 3 of 13) intron (NM_198168, intron 3 of 13) 2322 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding unique_peak2_20_32_-0.924804443765829_4.58199189747554_1.31432283146954-2 chr19 34445961 34446444 + 1.31432283146954 NA Intergenic Intergenic 28933 NM_009890 12642 Mm.30824 NM_009890 ENSMUSG00000050370 Ch25h AI462618|m25OH cholesterol 25-hydroxylase protein-coding unique_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954-3 chr6 39204929 39205665 + 1.31432283146954 NA intron (NM_001033430, intron 1 of 19) intron (NM_001033430, intron 1 of 19) 1476 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding unique_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954 chr11 102644073 102644343 + 1.31432283146954 NA Intergenic Intergenic -19792 NR_033474 77132 Mm.194729 NR_033474 2810433D01Rik - RIKEN cDNA 2810433D01 gene ncRNA common_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954-3 chr8 11392719 11393034 + 1.31432283146954 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -80050 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_20_32_-0.924804443765829_4.58199189747554_1.31432283146954 chr18 61725866 61726237 + 1.31432283146954 NA promoter-TSS (NR_029432) promoter-TSS (NR_029432) 280 NM_021296 17714 Mm.269657 NM_021296 ENSMUSG00000024580 Grpel2 mt-GrpE#2|mt-Grpel2 GrpE-like 2, mitochondrial protein-coding unique_peak1_38_17_0.836448775240257_4.58814938906244_1.31432283146954-2 chr19 28388228 28388693 + 1.31432283146954 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -289764 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_106_119_-0.45472455857936_6.67952831631884_1.31294114345216 chr8 105900443 105901192 + 1.31294114345216 NA intron (NM_173432, intron 1 of 2) CpG 343 NM_173432 244631 Mm.27627 NM_173432 ENSMUSG00000048310 Pskh1 AW539964|E130013P03Rik|b2b1230Clo protein serine kinase H1 protein-coding common_peak2_145_88_0.421627025026285_6.68654694347954_1.31294114345216 chr10 78574466 78576064 + 1.31294114345216 NA intron (NM_001359302, intron 1 of 14) intron (NM_001359302, intron 1 of 14) 274 NM_001359303 216136 Mm.2644 NM_173751 ENSMUSG00000032763 Ilvbl 5830463I21|AI415009 ilvB (bacterial acetolactate synthase)-like protein-coding common_peak2_107_119_-0.441398724281604_6.68619123346772_1.31294114345216 chr5 86804280 86804970 + 1.31294114345216 NA intron (NM_177680, intron 1 of 16) CpG 359 NM_001359907 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak2_99_112_-0.464935079836124_6.58771142249713_1.31246798253751 chr4 139579821 139581042 + 1.31246798253751 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 5711 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_122_134_-0.425020427222938_6.86430538343936_1.31063307577264 chr11 103132071 103132908 + 1.31063307577264 NA promoter-TSS (NM_027658) promoter-TSS (NM_027658) -850 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227-3 chr7 140137611 140138133 + 1.30960498844227 NA intron (NM_199301, intron 1 of 10) intron (NM_199301, intron 1 of 10) 308 NM_199301 212508 Mm.296088 NM_199301 ENSMUSG00000039018 Mtg1 Gm169|Gtpbp7 mitochondrial ribosome-associated GTPase 1 protein-coding common_peak2_27_40_-0.825852910826159_4.944625549205_1.30960498844227 chr11 58978009 58978516 + 1.30960498844227 NA exon (NM_001290988, exon 1 of 7) exon (NM_001290988, exon 1 of 7) 169 NM_053168 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak2_47_23_0.71885816615085_4.94439158379658_1.30960498844227 chr2 33887024 33887403 + 1.30960498844227 NA intron (NM_175184, intron 1 of 9) CpG 733 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak1_48_23_0.748395642644899_4.9591603220436_1.30960498844227-5 chr8 105505055 105505712 + 1.30960498844227 NA Intergenic Intergenic -8481 NM_175160 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding common_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227-2 chr6 122702871 122703198 + 1.30960498844227 NA Intergenic Intergenic -4455 NM_001289831 71950 Mm.6047 NM_028016 ENSMUSG00000012396 Nanog 2410002E02Rik|ENK|ecat4 Nanog homeobox protein-coding common_peak2_48_23_0.748395642644899_4.9591603220436_1.30960498844227 chr15 83411591 83412043 + 1.30960498844227 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 21033 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_48_23_0.748395642644899_4.9591603220436_1.30960498844227-2 chr15 89178561 89178916 + 1.30960498844227 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 2050 NM_001284506 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227-4 chr8 119728558 119729062 + 1.30960498844227 NA intron (NM_026922, intron 6 of 26) intron (NM_026922, intron 6 of 26) 28801 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak2_48_23_0.748395642644899_4.9591603220436_1.30960498844227-2 chr3 27585646 27586205 + 1.30960498844227 NA promoter-TSS (NR_037275) promoter-TSS (NR_037275) -930 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak2_27_40_-0.825852910826159_4.944625549205_1.30960498844227-2 chr17 6430234 6430630 + 1.30960498844227 NA intron (NM_009342, intron 1 of 4) intron (NM_009342, intron 1 of 4) 320 NM_009342 21648 Mm.1948 NM_009342 ENSMUSG00000096255 Dynlt1b AGS2|Dynlt1|Tctex-1|Tctex1 dynein light chain Tctex-type 1B protein-coding common_peak1_48_23_0.748395642644899_4.9591603220436_1.30960498844227 chr12 8673678 8674042 + 1.30960498844227 NA promoter-TSS (NM_001160219) promoter-TSS (NM_001160219) -274 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227 chr16 57367315 57367899 + 1.30960498844227 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 14330 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_48_23_0.748395642644899_4.9591603220436_1.30960498844227-4 chr6 30173479 30173925 + 1.30960498844227 NA non-coding (NR_126541, exon 1 of 2) non-coding (NR_126541, exon 1 of 2) 423 NR_126540 101447999 NR_126540 Mirc35hg - microRNA cluster 35, host gene ncRNA common_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227-6 chr9 35559464 35560115 + 1.30960498844227 NA intron (NM_023292, intron 2 of 4) intron (NM_023292, intron 2 of 4) 1229 NM_023292 67049 Mm.425574 NM_023292 ENSMUSG00000032103 Pus3 2610020J05Rik|5730412F04Rik pseudouridine synthase 3 protein-coding common_peak1_27_40_-0.825852910826159_4.944625549205_1.30960498844227 chr16 86347552 86348224 + 1.30960498844227 NA Intergenic Intergenic -446763 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227-5 chr9 7872675 7873412 + 1.30960498844227 NA 5' UTR (NM_007464, exon 1 of 9) 5' UTR (NM_007464, exon 1 of 9) 127 NM_007464 11796 Mm.2026 NM_007464 ENSMUSG00000032000 Birc3 AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2 baculoviral IAP repeat-containing 3 protein-coding common_peak2_27_40_-0.825852910826159_4.944625549205_1.30960498844227-3 chr8 120071425 120071828 + 1.30960498844227 NA Intergenic Intergenic 29846 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_48_23_0.748395642644899_4.9591603220436_1.30960498844227-3 chr3 144682998 144683509 + 1.30960498844227 NA TTS (NM_001282042) TTS (NM_001282042) 37082 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak1_47_23_0.71885816615085_4.94439158379658_1.30960498844227 chr10 128566313 128566631 + 1.30960498844227 NA promoter-TSS (NM_011119) promoter-TSS (NM_011119) -538 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding common_peak1_27_40_-0.825852910826159_4.944625549205_1.30960498844227-2 chr4 137594268 137594720 + 1.30960498844227 NA exon (NM_001347227, exon 1 of 27) exon (NM_001347227, exon 1 of 27) 322 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_48_23_0.748395642644899_4.9591603220436_1.30960498844227-3 chr16 17809126 17809790 + 1.30960498844227 NA Intergenic Intergenic 12176 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding unique_peak1_48_23_0.748395642644899_4.9591603220436_1.30960498844227 chr5 91283427 91284409 + 1.30960498844227 NA promoter-TSS (NR_040428) promoter-TSS (NR_040428) -842 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA common_peak2_148_158_-0.386385558759089_7.11969017590481_1.30889908687536 chr13 9093869 9095388 + 1.30889908687536 NA intron (NM_172585, intron 1 of 17) CpG 747 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak2_196_202_-0.338797555110501_7.49593713962993_1.3087562029263 chr18 34930329 34931928 + 1.3087562029263 NA intron (NM_144866, intron 2 of 10) intron (NM_144866, intron 2 of 10) 875 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak1_322_215_0.279956806353846_7.89486590534039_1.30827833287688 chr8 20423858 20424751 + 1.30827833287688 NA intron (NR_028428, intron 1 of 5) CpG 510 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo common_peak2_173_108_0.380509319254552_6.9584389844042_1.30823723863456 chr11 5521031 5522145 + 1.30823723863456 NA intron (NM_013842, intron 1 of 4) CpG 947 NM_001271730 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166 chr1 192076546 192077037 + 1.30767018140166 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 15808 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_43_20_0.7868579798183_4.78574641268791_1.30767018140166-3 chr11 102408067 102408468 + 1.30767018140166 NA promoter-TSS (NM_026542) promoter-TSS (NM_026542) -750 NM_026542 68066 Mm.44226 NM_026542 ENSMUSG00000018677 Slc25a39 3010027G13Rik|D11Ertd333e solute carrier family 25, member 39 protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-3 chr14 76773876 76774470 + 1.30767018140166 NA Intergenic Intergenic 14042 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-3 chr8 94179262 94179590 + 1.30767018140166 NA intron (NM_013602, intron 1 of 2) CpG 337 NM_013602 17748 Mm.192991 NM_013602 ENSMUSG00000031765 Mt1 MT-I|Mt-1 metallothionein 1 protein-coding unique_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166 chr15 38519448 38519902 + 1.30767018140166 NA promoter-TSS (NM_001102458) promoter-TSS (NM_001102458) -409 NM_018745 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-5 chr18 80550745 80551187 + 1.30767018140166 NA Intergenic Intergenic -6420 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_43_20_0.7868579798183_4.78574641268791_1.30767018140166 chr1 75398488 75398912 + 1.30767018140166 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) -1385 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-4 chr17 87313337 87314038 + 1.30767018140166 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 30801 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-7 chr8 3587615 3588256 + 1.30767018140166 NA exon (NM_001163749, exon 1 of 17) exon (NM_001163749, exon 1 of 17) 485 NM_001347111 69697 Mm.390010 NM_027171 ENSMUSG00000044433 Camsap3 2310057J16Rik|Kiaa1543|Nezha calmodulin regulated spectrin-associated protein family, member 3 protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-6 chr3 121474294 121474841 + 1.30767018140166 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 48026 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_43_20_0.7868579798183_4.78574641268791_1.30767018140166-2 chr11 69413973 69414451 + 1.30767018140166 NA promoter-TSS (NM_001017426) promoter-TSS (NM_001017426) -537 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-2 chr13 70836625 70837080 + 1.30767018140166 NA intron (NM_172053, intron 2 of 22) intron (NM_172053, intron 2 of 22) 4959 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_43_20_0.7868579798183_4.78574641268791_1.30767018140166-2 chr16 36828467 36829193 + 1.30767018140166 NA promoter-TSS (NM_001113401) promoter-TSS (NM_001113401) 430 NM_177128 320299 Mm.222934 NM_177128 ENSMUSG00000022837 Iqcb1 6820449I09Rik|AV128382|NPHP5 IQ calmodulin-binding motif containing 1 protein-coding common_peak2_23_36_-0.898577719183701_4.7601645060371_1.30767018140165-5 chr4 141565387 141566043 + 1.30767018140165 NA Intergenic ID_B1|SINE|B4 19553 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_23_36_-0.898577719183701_4.7601645060371_1.30767018140165 chr11 117331411 117332111 + 1.30767018140165 NA promoter-TSS (NM_001113488) promoter-TSS (NM_001113488) 46 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_23_36_-0.898577719183701_4.7601645060371_1.30767018140165-4 chr2 68985002 68985517 + 1.30767018140165 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 123818 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_23_36_-0.898577719183701_4.7601645060371_1.30767018140165 chr5 96802600 96802937 + 1.30767018140165 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 9383 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak2_23_36_-0.898577719183701_4.7601645060371_1.30767018140165-2 chr11 121672668 121673031 + 1.30767018140165 NA intron (NM_178664, intron 1 of 12) CpG 302 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_23_36_-0.898577719183701_4.7601645060371_1.30767018140165-3 chr2 3135220 3135654 + 1.30767018140165 NA intron (NM_001347067, intron 1 of 7) intron (NM_001347067, intron 1 of 7) 16752 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding unique_peak2_23_36_-0.898577719183701_4.7601645060371_1.30767018140165 chr8 44998986 44999341 + 1.30767018140165 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 48955 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_86_99_-0.488107566170004_6.39980240668972_1.30703964844599-2 chr8 25976114 25977290 + 1.30703964844599 NA promoter-TSS (NM_029884) promoter-TSS (NM_029884) 42 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak2_86_99_-0.488107566170004_6.39980240668972_1.30703964844599 chr8 25067209 25067990 + 1.30703964844599 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -28637 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak2_120_71_0.458385759534012_6.39911788120932_1.30703964844597 chr19 8997122 8997768 + 1.30703964844597 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 8161 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_120_71_0.458385759534012_6.39911788120932_1.30703964844597-2 chr8 110919896 110920970 + 1.30703964844597 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 568 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak1_83_46_0.550890864768498_5.83003428406189_1.30667537457952-2 chr5 31628074 31629080 + 1.30667537457952 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 14626 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_83_46_0.550890864768498_5.83003428406189_1.30667537457952 chr19 17873406 17874304 + 1.30667537457952 NA Intergenic Intergenic -36223 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding common_peak2_55_69_-0.604638902726286_5.82696356558182_1.30667537457952 chr17 65883659 65884815 + 1.30667537457952 NA intron (NM_009067, intron 1 of 9) CpG 686 NM_001198949 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak1_55_69_-0.604638902726286_5.82696356558182_1.30667537457952 chr19 16365809 16366459 + 1.30667537457952 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -51130 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_309_206_0.282509521660848_7.83474171832975_1.30596275698997 chr8 109778145 109780000 + 1.30596275698997 NA intron (NM_001301211, intron 1 of 22) CpG 489 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak2_260_170_0.311676731373034_7.57369088057242_1.30580285823393 chr8 105544828 105546535 + 1.30580285823393 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 20383 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_241_242_-0.303556722202701_7.77303414250443_1.30443882695858 chr8 110845248 110847466 + 1.30443882695858 NA promoter-TSS (NM_001310607) promoter-TSS (NM_001310607) -243 NM_001310607 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding common_peak2_198_203_-0.331416989623543_7.50671684715972_1.30321093869228 chr14 76555645 76557568 + 1.30321093869228 NA promoter-TSS (NM_001160326) promoter-TSS (NM_001160326) 81 NR_153389 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak1_59_30_0.66928125523901_5.28883693800638_1.30310500416066 chr11 78368094 78368838 + 1.30310500416066 NA intron (NM_008238, intron 4 of 8) intron (NM_008238, intron 4 of 8) 18142 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak1_35_49_-0.75214494110202_5.26778371922371_1.30310500416066-2 chr18 37883807 37884302 + 1.30310500416066 NA intron (NM_007858, intron 16 of 26) intron (NM_007858, intron 16 of 26) -29394 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA common_peak1_35_49_-0.75214494110202_5.26778371922371_1.30310500416066 chr17 79835638 79836046 + 1.30310500416066 NA Intergenic Intergenic 60281 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding unique_peak2_35_49_-0.75214494110202_5.26778371922371_1.30310500416066 chr9 24974096 24975260 + 1.30310500416066 NA intron (NR_153861, intron 1 of 4) intron (NR_153861, intron 1 of 4) 470 NR_153861 102631612 Mm.410759 NR_153861 E130101E03Rik - RIKEN cDNA E130101E03 gene ncRNA common_peak1_59_30_0.66928125523901_5.28883693800638_1.30310500416066-4 chr6 5443163 5443917 + 1.30310500416066 NA Intergenic Intergenic 52738 NM_013743 27273 Mm.235547 NM_013743 ENSMUSG00000019577 Pdk4 AV005916 pyruvate dehydrogenase kinase, isoenzyme 4 protein-coding common_peak2_35_49_-0.75214494110202_5.26778371922371_1.30310500416066 chr1 77538763 77539566 + 1.30310500416066 NA Intergenic Intergenic -24076 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding common_peak2_35_49_-0.75214494110202_5.26778371922371_1.30310500416066-4 chr7 141172185 141172794 + 1.30310500416066 NA intron (NM_001172100, intron 1 of 9) intron (NM_001172100, intron 1 of 9) 362 NM_001172100 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak2_59_30_0.66928125523901_5.28883693800638_1.30310500416066-2 chr12 111663716 111664675 + 1.30310500416066 NA Intergenic Intergenic 8143 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding common_peak2_35_49_-0.75214494110202_5.26778371922371_1.30310500416066-3 chr6 52176087 52176796 + 1.30310500416066 NA intron (NM_010452, intron 3 of 4) intron (NM_010452, intron 3 of 4) 3560 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA common_peak1_59_30_0.66928125523901_5.28883693800638_1.30310500416066-5 chr9 8002523 8003234 + 1.30310500416066 NA intron (NM_009534, intron 1 of 7) intron (NM_009534, intron 1 of 7) 1718 NM_009534 22601 Mm.221992 NM_009534 ENSMUSG00000053110 Yap1 AI325207|Yap|Yap65|Yki|Yorkie yes-associated protein 1 protein-coding common_peak1_59_30_0.66928125523901_5.28883693800638_1.30310500416066-2 chr5 105780850 105781278 + 1.30310500416066 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 80254 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_59_30_0.66928125523901_5.28883693800638_1.30310500416066 chr11 59456762 59457245 + 1.30310500416066 NA non-coding (NR_037992, exon 6 of 6) non-coding (NR_037992, exon 6 of 6) 6958 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak1_59_30_0.66928125523901_5.28883693800638_1.30310500416066-3 chr5 134932361 134932720 + 1.30310500416066 NA promoter-TSS (NM_001359537) promoter-TSS (NM_001359537) 16 NM_001359537 79565 Mm.34235 NM_024479 ENSMUSG00000040557 Mettl27 AW492986|BC002286|Wbscr27 methyltransferase like 27 protein-coding common_peak2_35_49_-0.75214494110202_5.26778371922371_1.30310500416066-2 chr13 33000876 33001588 + 1.30310500416066 NA Intergenic Intergenic -3309 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_59_30_0.66928125523901_5.28883693800638_1.30310500416066-3 chr6 17211909 17212428 + 1.30310500416066 NA Intergenic Intergenic 14061 NR_102304 319682 Mm.136046 NR_102304 ENSMUSG00000085171 D830026I12Rik - RIKEN cDNA D830026I12 gene ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-16 chr2 27717470 27718006 + 1.30305656033811 NA intron (NM_001290482, intron 1 of 9) intron (NM_001290482, intron 1 of 9) 7155 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-21 chr3 121946476 121946889 + 1.30305656033811 NA Intergenic Intergenic -6547 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-2 chr3 66210238 66210705 + 1.30305656033811 NA intron (NM_145820, intron 5 of 13) intron (NM_145820, intron 5 of 13) -9416 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-4 chr10 71072289 71072593 + 1.30305656033811 NA intron (NM_031397, intron 2 of 20) intron (NM_031397, intron 2 of 20) 87249 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-31 chr7 84466365 84466573 + 1.30305656033811 NA Intergenic Intergenic -56431 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-15 chr8 128651807 128652293 + 1.30305656033811 NA Intergenic Intergenic -33604 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-4 chr4 120824840 120825105 + 1.30305656033811 NA 5' UTR (NM_001357193, exon 1 of 10) 5' UTR (NM_001357193, exon 1 of 10) 237 NM_001357193 18046 Mm.318389 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-4 chr1 165281500 165281754 + 1.30305656033811 NA Intergenic Intergenic -14139 NM_001310429 240888 Mm.329929 NM_001081126 ENSMUSG00000040836 Gpr161 Gm208|Gm208Gpr|vl G protein-coupled receptor 161 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-8 chr14 75938219 75938535 + 1.30305656033811 NA intron (NM_026816, intron 5 of 7) intron (NM_026816, intron 5 of 7) -16626 NM_026214 67516 Mm.390712 NM_026214 ENSMUSG00000046523 Kctd4 2210017A09Rik|AU017169 potassium channel tetramerisation domain containing 4 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-3 chr1 194978528 194978891 + 1.30305656033811 NA Intergenic Intergenic -1750 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-2 chr1 63995574 63995898 + 1.30305656033811 NA Intergenic Intergenic 31009 NR_027824 433315 Mm.342696 NM_001013800 ENSMUSG00000044689 Gm13749 - predicted gene 13749 ncRNA unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-10 chr17 8310542 8310858 + 1.30305656033811 NA promoter-TSS (NM_134114) promoter-TSS (NM_134114) -388 NM_001357890 106489 Mm.311080 NM_134114 ENSMUSG00000073468 Sft2d1 5630401J11Rik|AA409698 SFT2 domain containing 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-37 chr8 119430951 119431142 + 1.30305656033811 NA Intergenic Intergenic -6116 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-34 chr8 57486725 57486967 + 1.30305656033811 NA intron (NM_021788, intron 1 of 3) intron (NM_021788, intron 1 of 3) 1014 NM_021788 60406 Mm.118 NM_021788 ENSMUSG00000031609 Sap30 30kDa sin3 associated polypeptide protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-24 chr4 151005773 151006066 + 1.30305656033811 NA exon (NM_001289878, exon 22 of 22) exon (NM_001289878, exon 22 of 22) 8822 NM_011910 24111 Mm.89984 NM_011910 ENSMUSG00000028963 Uts2 UII|Ucn2|prepro-UII urotensin 2 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-23 chr4 59318448 59318781 + 1.30305656033811 NA intron (NM_001163288, intron 15 of 16) intron (NM_001163288, intron 15 of 16) 58563 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-6 chr10 24218146 24218599 + 1.30305656033811 NA Intergenic Intergenic -5145 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-6 chr12 76545128 76545386 + 1.30305656033811 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 2668 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-10 chr14 48202869 48203105 + 1.30305656033811 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 4271 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-33 chr7 144945047 144945392 + 1.30305656033811 NA Intergenic Intergenic -5294 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-3 chr5 92989042 92989252 + 1.30305656033811 NA Intergenic Intergenic 55875 NM_175270 78088 Mm.245085 NM_175270 ENSMUSG00000045314 Sowahb 5730467H21Rik|Ankrd56 sosondowah ankyrin repeat domain family member B protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-12 chr4 81052350 81052625 + 1.30305656033811 NA Intergenic Intergenic 141801 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-5 chr1 191325966 191326281 + 1.30305656033811 NA intron (NM_025864, intron 1 of 7) CpG 158 NM_025864 66950 Mm.236300 NM_025864 ENSMUSG00000026627 Tmem206 2310028N02Rik|AI118576 transmembrane protein 206 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-5 chr11 33143349 33143705 + 1.30305656033811 NA intron (NM_008005, intron 2 of 4) intron (NM_008005, intron 2 of 4) 3873 NM_008005 14172 Mm.339812 NM_008005 ENSMUSG00000057967 Fgf18 D130055P09Rik|FGF-18 fibroblast growth factor 18 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-9 chr15 59756382 59756813 + 1.30305656033811 NA Intergenic Intergenic 38362 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-26 chr5 3408757 3409024 + 1.30305656033811 NA intron (NM_009873, intron 3 of 7) intron (NM_009873, intron 3 of 7) 64997 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-32 chr7 112662705 112662916 + 1.30305656033811 NA Intergenic Intergenic -16510 NM_001166584 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-11 chr15 78448006 78448338 + 1.30305656033811 NA intron (NM_001355601, intron 10 of 17) intron (NM_001355601, intron 10 of 17) 19608 NR_110357 72844 Mm.390816 NM_001081367 ENSMUSG00000033287 Kctd17 2900008M13Rik|AA414907|AW742389|N28155 potassium channel tetramerisation domain containing 17 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-2 chr1 118459177 118459468 + 1.30305656033811 NA promoter-TSS (NR_027901) promoter-TSS (NR_027901) -57 NR_027901 68204 Mm.443536 NR_027901 ENSMUSG00000107722 2900060B14Rik - RIKEN cDNA 2900060B14 gene ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-18 chr3 41605830 41606033 + 1.30305656033811 NA intron (NM_001130184, intron 9 of 10) intron (NM_001130184, intron 9 of 10) 41051 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-3 chr1 150027608 150027922 + 1.30305656033811 NA Intergenic Intergenic -66475 NM_008869 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-38 chr9 119051413 119051747 + 1.30305656033811 NA Intergenic Intergenic -1198 NM_011700 22351 Mm.83817 NM_011700 ENSMUSG00000038775 Vill Villp villin-like protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-11 chr19 46970047 46970274 + 1.30305656033811 NA promoter-TSS (NM_001164365) promoter-TSS (NM_001164365) -593 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-28 chr5 151251029 151251615 + 1.30305656033811 NA Intergenic Intergenic -61129 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-12 chr17 6601178 6601532 + 1.30305656033811 NA promoter-TSS (NM_001166627) promoter-TSS (NM_001166627) -316 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-35 chr8 105963931 105964140 + 1.30305656033811 NA intron (NR_045594, intron 1 of 23) intron (NR_045594, intron 1 of 23) 2080 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-25 chr4 151338983 151339395 + 1.30305656033811 NA intron (NM_001081557, intron 5 of 23) intron (NM_001081557, intron 5 of 23) 249619 NM_001308446 105704528 Mm.415128 NM_001308446 ENSMUSG00000078491 Gm13090 - predicted gene 13090 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-19 chr3 95134740 95135061 + 1.30305656033811 NA promoter-TSS (NM_001163573) promoter-TSS (NM_001163573) 812 NM_153121 217779 Mm.341945 NM_153121 ENSMUSG00000053769 Lysmd1 2610022K04Rik|AI415311 LysM, putative peptidoglycan-binding, domain containing 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-8 chr11 117205044 117205321 + 1.30305656033811 NA intron (NM_001113486, intron 1 of 11) intron (NM_001113486, intron 1 of 11) 5521 NM_001113486 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811 chr1 132390768 132391109 + 1.30305656033811 NA promoter-TSS (NM_001311107) promoter-TSS (NM_001311107) 448 NM_178874 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-7 chr10 34283243 34283746 + 1.30305656033811 NA 3' UTR (NM_009433, exon 1 of 1) 3' UTR (NM_009433, exon 1 of 1) 1304 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding common_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-5 chr4 147999132 147999403 + 1.30305656033811 NA Intergenic Intergenic -1455 NM_008725 230899 Mm.482123 NM_008725 ENSMUSG00000041616 Nppa ANP|Anf|Pnd natriuretic peptide type A protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-17 chr2 132253412 132253857 + 1.30305656033811 NA promoter-TSS (NM_011045) promoter-TSS (NM_011045) -454 NM_011045 18538 Mm.7141 NM_011045 ENSMUSG00000027342 Pcna - proliferating cell nuclear antigen protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811 chr1 51289443 51289746 + 1.30305656033811 NA exon (NM_138741, exon 1 of 2) exon (NM_138741, exon 1 of 2) 468 NM_138741 20324 Mm.398690 NM_138741 ENSMUSG00000045954 Cavin2 Sdpr caveolae associated 2 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-20 chr3 101073513 101073867 + 1.30305656033811 NA intron (NM_011197, intron 3 of 8) intron (NM_011197, intron 3 of 8) 36476 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-13 chr19 4120625 4120892 + 1.30305656033811 NA intron (NM_016666, intron 2 of 6) intron (NM_016666, intron 2 of 6) 817 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811 chr19 37673272 37673506 + 1.30305656033811 NA intron (NM_175353, intron 20 of 21) intron (NM_175353, intron 20 of 21) -12291 NM_001105201 546726 Mm.457750 NM_001105201 ENSMUSG00000062432 Cyp26c1 EG546726 cytochrome P450, family 26, subfamily c, polypeptide 1 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-30 chr7 80829273 80829798 + 1.30305656033811 NA Intergenic Intergenic -26204 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-14 chr7 73588898 73589271 + 1.30305656033811 NA Intergenic Intergenic -30689 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-7 chr13 109612061 109612439 + 1.30305656033811 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) 287506 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA unique_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-13 chr4 95500522 95500868 + 1.30305656033811 NA Intergenic Intergenic -56812 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak2_9_19_-1.26517617234244_3.68934000871614_1.30305656033811-4 chr8 46792939 46793158 + 1.30305656033811 NA intron (NR_152560, intron 1 of 7) intron (NR_152560, intron 1 of 7) 53303 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-36 chr8 110630748 110631205 + 1.30305656033811 NA intron (NR_151675, intron 1 of 17) intron (NR_151675, intron 1 of 17) 12409 NR_151675 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-14 chr2 4501334 4501637 + 1.30305656033811 NA intron (NM_001177843, intron 5 of 23) intron (NM_001177843, intron 5 of 23) -58269 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-27 chr5 32930767 32931054 + 1.30305656033811 NA intron (NM_001025426, intron 25 of 42) intron (NM_001025426, intron 25 of 42) 67189 NM_001170567 277854 Mm.101524 NM_177786 ENSMUSG00000037426 Depdc5 AV016528 DEP domain containing 5 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-22 chr4 32522172 32522563 + 1.30305656033811 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 49295 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-15 chr2 22896144 22896610 + 1.30305656033811 NA intron (NR_149721, intron 1 of 10) intron (NR_149721, intron 1 of 10) 855 NM_001355467 56075 Mm.249752 NM_019501 ENSMUSG00000026784 Pdss1 2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1 prenyl (solanesyl) diphosphate synthase, subunit 1 protein-coding common_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-3 chr17 25134259 25135035 + 1.30305656033811 NA intron (NM_011930, intron 1 of 24) intron (NM_011930, intron 1 of 24) 1256 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-29 chr7 34131690 34132041 + 1.30305656033811 NA intron (NM_207212, intron 1 of 7) intron (NM_207212, intron 1 of 7) 1403 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811 chr1 16220965 16221211 + 1.30305656033811 NA Intergenic Intergenic 115206 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-2 chr1 133843696 133843947 + 1.30305656033811 NA Intergenic Intergenic 63352 NM_054076 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding unique_peak1_22_8_1.07998327992719_3.70991664140591_1.30305656033811-9 chr13 53501678 53502032 + 1.30305656033811 NA Intergenic Intergenic -29075 NM_013601 17702 Mm.1763 NM_013601 ENSMUSG00000021469 Msx2 BB122635|Hox-8|Hox8|Hox8.1 msh homeobox 2 protein-coding unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293 chr11 78366955 78367347 + 1.30248952876293 NA intron (NM_008238, intron 4 of 8) intron (NM_008238, intron 4 of 8) 19457 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-19 chr2 48480464 48480923 + 1.30248952876293 NA Intergenic Intergenic -333416 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-32 chrX 103617049 103617243 + 1.30248952876293 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 6608 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA common_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-2 chr9 107724669 107724976 + 1.30248952876293 NA Intergenic Intergenic -14347 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-7 chr7 130964258 130964702 + 1.30248952876293 NA intron (NM_019564, intron 3 of 8) B2_Mm1a|SINE|B2 28277 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-27 chr7 79254729 79255297 + 1.30248952876293 NA Intergenic Intergenic -18253 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-8 chr9 123528630 123528903 + 1.30248952876293 NA promoter-TSS (NM_030692) promoter-TSS (NM_030692) -987 NM_001357485 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-16 chr18 63465318 63465663 + 1.30248952876293 NA Intergenic Intergenic -78307 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-12 chr14 69391612 69392112 + 1.30248952876293 NA Intergenic Intergenic 54711 NM_001359160 100862375 Mm.489765 NM_001359159 ENSMUSG00000022066 Entpd4b Gm21685 ectonucleoside triphosphate diphosphohydrolase 4B protein-coding unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-4 chr4 58197954 58198330 + 1.30248952876293 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 8454 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-7 chr11 106999787 107000148 + 1.30248952876293 NA promoter-TSS (NM_010655) promoter-TSS (NM_010655) -442 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-26 chr6 118562364 118562699 + 1.30248952876293 NA promoter-TSS (NM_001081112) promoter-TSS (NM_001081112) -275 NM_001081112 232339 Mm.276116 NM_001081112 ENSMUSG00000007827 Ankrd26 5730521P14Rik|BC008111|mKIAA1074 ankyrin repeat domain 26 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-9 chr12 27493835 27494117 + 1.30248952876293 NA Intergenic Intergenic -151258 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-5 chr5 64478981 64479477 + 1.30248952876293 NA non-coding (NR_045411, exon 3 of 3) non-coding (NR_045411, exon 3 of 3) 2221 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-7 chr8 123004169 123004567 + 1.30248952876293 NA intron (NM_001081379, intron 1 of 12) RSINE1|SINE|B4 37916 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-13 chr15 102145023 102145270 + 1.30248952876293 NA intron (NM_008344, intron 1 of 3) intron (NM_008344, intron 1 of 3) 960 NM_008344 16012 Mm.358609 NM_008344 ENSMUSG00000023046 Igfbp6 IGFBP-6 insulin-like growth factor binding protein 6 protein-coding common_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293 chr9 102647782 102648060 + 1.30248952876293 NA Intergenic Intergenic 21625 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-22 chr4 124709773 124710207 + 1.30248952876293 NA Intergenic Intergenic -4871 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-2 chr1 135409969 135410550 + 1.30248952876293 NA intron (NM_001357578, intron 5 of 24) intron (NM_001357578, intron 5 of 24) 20232 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-6 chr7 28867467 28867826 + 1.30248952876293 NA Intergenic Intergenic 3260 NM_008496 16858 Mm.20973 NM_008496 ENSMUSG00000053522 Lgals7 Galectin-7|Pig1 lectin, galactose binding, soluble 7 protein-coding common_peak2_26_10_1.02017021183611_3.96951672455535_1.30248952876293 chr8 25092773 25092981 + 1.30248952876293 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 8934 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-18 chr2 35696563 35696896 + 1.30248952876293 NA promoter-TSS (NM_001290639) promoter-TSS (NM_001290639) -3 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-24 chr5 124551959 124552305 + 1.30248952876293 NA promoter-TSS (NM_026409) promoter-TSS (NM_026409) -732 NM_001190795 67848 Mm.281601 NM_026409 ENSMUSG00000029389 Ddx55 2810021H22Rik|mKIAA1595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-5 chr10 43655108 43655645 + 1.30248952876293 NA Intergenic Intergenic 61949 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-2 chr13 69489464 69489754 + 1.30248952876293 NA Intergenic Intergenic 44255 NM_198600 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-5 chr6 49792847 49793126 + 1.30248952876293 NA Intergenic Intergenic -29724 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-3 chr1 182506501 182506786 + 1.30248952876293 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 10967 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-15 chr17 80892092 80892608 + 1.30248952876293 NA Intergenic Intergenic -4443 NR_131128 320784 Mm.474182 NR_131127 ENSMUSG00000112121 C230072F16Rik - RIKEN cDNA C230072F16 gene ncRNA unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-3 chr4 6190856 6191351 + 1.30248952876293 NA promoter-TSS (NM_026534) promoter-TSS (NM_026534) -2 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-4 chr10 7260655 7261247 + 1.30248952876293 NA Intergenic Intergenic -48714 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293 chr1 183941104 183941611 + 1.30248952876293 NA Intergenic Intergenic 92641 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-20 chr2 72313569 72314054 + 1.30248952876293 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 28110 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-8 chrX 85777048 85777275 + 1.30248952876293 NA promoter-TSS (NM_001294138) promoter-TSS (NM_001294138) -342 NM_001294138 14933 Mm.246682 NM_008194 ENSMUSG00000025059 Gk D930012N15Rik|Gyk glycerol kinase protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-3 chr14 31018152 31018431 + 1.30248952876293 NA promoter-TSS (NM_001081251) promoter-TSS (NM_001081251) 840 NM_153547 30877 Mm.88512 NM_153547 ENSMUSG00000042354 Gnl3 Ns guanine nucleotide binding protein-like 3 (nucleolar) protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-10 chr12 80099412 80099934 + 1.30248952876293 NA Intergenic Intergenic 13340 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-31 chrX 7765390 7765776 + 1.30248952876293 NA exon (NM_001105196, exon 2 of 9) exon (NM_001105196, exon 2 of 9) 1542 NM_001271491 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-4 chr3 87174869 87175262 + 1.30248952876293 NA promoter-TSS (NM_130867) promoter-TSS (NM_130867) -318 NM_130867 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-23 chr5 64343419 64343866 + 1.30248952876293 NA intron (NM_001289514, intron 17 of 18) intron (NM_001289514, intron 17 of 18) 113285 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-17 chr19 12487056 12487405 + 1.30248952876293 NA intron (NM_172442, intron 2 of 8) intron (NM_172442, intron 2 of 8) 14766 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-25 chr6 85137889 85138315 + 1.30248952876293 NA promoter-TSS (NM_011467) promoter-TSS (NM_011467) -338 NM_011467 20751 Mm.28393 NM_011467 ENSMUSG00000033735 Spr AA409688|Gm10328 sepiapterin reductase protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-6 chr11 60302151 60302376 + 1.30248952876293 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 50642 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-30 chr9 102738391 102738957 + 1.30248952876293 NA promoter-TSS (NR_033301) promoter-TSS (NR_033301) -974 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-8 chr11 118428962 118429467 + 1.30248952876293 NA intron (NM_001204129, intron 1 of 3) intron (NM_001204129, intron 1 of 3) 757 NM_001204129 56745 Mm.23845 NM_019959 ENSMUSG00000017446 C1qtnf1 1600017K21Rik|CTRP1|Zsig37 C1q and tumor necrosis factor related protein 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-29 chr8 117256184 117256511 + 1.30248952876293 NA promoter-TSS (NM_001163262) promoter-TSS (NM_001163262) -672 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak2_11_22_-1.20563133003852_3.92074629103775_1.30248952876293-6 chr8 93889395 93889697 + 1.30248952876293 NA intron (NM_001113384, intron 2 of 7) intron (NM_001113384, intron 2 of 7) -75991 NR_026888 75809 Mm.443272 NM_029449 4930488L21Rik 4930452J22Rik RIKEN cDNA 4930488L21 gene ncRNA unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293 chr1 133778690 133778918 + 1.30248952876293 NA Intergenic Intergenic -25057 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-2 chr12 8381905 8382331 + 1.30248952876293 NA Intergenic Intergenic 68685 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-21 chr3 135518993 135519288 + 1.30248952876293 NA intron (NM_027288, intron 5 of 16) intron (NM_027288, intron 5 of 16) 33529 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-28 chr8 24432932 24433253 + 1.30248952876293 NA Intergenic Intergenic 5854 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-11 chr14 54232326 54232737 + 1.30248952876293 NA Intergenic Intergenic 21398 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_26_10_1.02017021183611_3.96951672455535_1.30248952876293-14 chr16 96364386 96364707 + 1.30248952876293 NA intron (NM_028078, intron 2 of 7) intron (NM_028078, intron 2 of 7) 2782 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak1_137_83_0.424316501671704_6.60447567361461_1.3020649407756 chr1 155235714 155237396 + 1.3020649407756 NA Intergenic Intergenic 77852 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_80_93_-0.501206398550024_6.30398565240263_1.30147050056452 chr10 16552240 16553248 + 1.30147050056452 NA Intergenic Intergenic 543038 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_80_93_-0.501206398550024_6.30398565240263_1.30147050056452-2 chr2 105016528 105017365 + 1.30147050056452 NA promoter-TSS (NM_145380) promoter-TSS (NM_145380) 81 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding common_peak2_79_93_-0.519001867852452_6.29508791775141_1.30147050056452 chr2 126301733 126303150 + 1.30147050056452 NA Intergenic RLTR9D2|LTR|ERVK 150300 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_79_93_-0.519001867852452_6.29508791775141_1.30147050056452-3 chr8 121107709 121108499 + 1.30147050056452 NA intron (NM_001166482, intron 1 of 8) CpG 275 NM_172761 234814 Mm.31690 NM_172761 ENSMUSG00000031816 Mthfsd AW049977|BC052066|C920004D05 methenyltetrahydrofolate synthetase domain containing protein-coding common_peak1_79_93_-0.519001867852452_6.29508791775141_1.30147050056452-2 chr8 116921040 116921738 + 1.30147050056452 NA promoter-TSS (NM_028131) promoter-TSS (NM_028131) 47 NM_026844 66531 Mm.4011 NM_026844 ENSMUSG00000014633 Cmc2 1110046L09Rik|2310061C15Rik|DC13 COX assembly mitochondrial protein 2 protein-coding common_peak1_79_93_-0.519001867852452_6.29508791775141_1.30147050056452 chr4 134767272 134768304 + 1.30147050056452 NA intron (NM_145554, intron 1 of 8) CpG 216 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_132_143_-0.406157476896279_6.96684626299417_1.30019425906985 chr14 25492779 25494552 + 1.30019425906985 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 34480 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_61_75_-0.577477973890804_5.95918852649818_1.29979449988493 chr11 94133776 94134945 + 1.29979449988493 NA Intergenic Intergenic -77094 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak2_61_75_-0.577477973890804_5.95918852649818_1.29979449988493-2 chr18 66328710 66329599 + 1.29979449988493 NA Intergenic Intergenic -37316 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak2_61_75_-0.577477973890804_5.95918852649818_1.29979449988493-3 chr3 121650722 121651300 + 1.29979449988493 NA Intergenic Intergenic -4558 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_91_51_0.535358604081919_5.96811902018205_1.29979449988492 chr6 6113653 6114716 + 1.29979449988492 NA intron (NM_001177572, intron 8 of 17) intron (NM_001177572, intron 8 of 17) 102989 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_90_51_0.519702526314907_5.96029098129855_1.29979449988492 chr3 103914563 103915477 + 1.29979449988492 NA exon (NM_001356556, exon 1 of 8) exon (NM_001356556, exon 1 of 8) 900 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|KDM9|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding common_peak2_77_42_0.573054042407226_5.71279177590571_1.29977634966096-2 chr13 95374818 95375378 + 1.29977634966096 NA 5' UTR (NM_025630, exon 1 of 14) 5' UTR (NM_025630, exon 1 of 14) 259 NM_025630 66549 Mm.36785 NM_025630 ENSMUSG00000021681 Aggf1 2010009L17Rik|2310029P06Rik|AW112072|Peg3|VG5Q angiogenic factor with G patch and FHA domains 1 protein-coding common_peak2_77_42_0.573054042407226_5.71279177590571_1.29977634966096-3 chr3 36151138 36151507 + 1.29977634966096 NA intron (NM_001101478, intron 1 of 3) CpG 242 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding common_peak1_77_42_0.573054042407226_5.71279177590571_1.29977634966096-2 chr9 42109202 42109780 + 1.29977634966096 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 14806 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_77_42_0.573054042407226_5.71279177590571_1.29977634966096 chr11 51635313 51636362 + 1.29977634966096 NA promoter-TSS (NM_025346) promoter-TSS (NM_025346) 59 NM_025346 66089 Mm.288183 NM_025346 ENSMUSG00000001054 Rmnd5b 0610039K22Rik|Gid2 required for meiotic nuclear division 5 homolog B protein-coding common_peak2_77_42_0.573054042407226_5.71279177590571_1.29977634966096 chr11 32455434 32456020 + 1.29977634966096 NA intron (NM_001361561, intron 1 of 1) CpG 357 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_50_64_-0.631701353464548_5.70651713629618_1.29977634966096-2 chr9 6455386 6456138 + 1.29977634966096 NA Intergenic Intergenic -189215 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_50_64_-0.631701353464548_5.70651713629618_1.29977634966096 chr6 70844585 70845141 + 1.29977634966096 NA exon (NM_010121, exon 1 of 17) exon (NM_010121, exon 1 of 17) 348 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak2_77_42_0.573054042407226_5.71279177590571_1.29977634966096-4 chr6 145746897 145747375 + 1.29977634966096 NA Intergenic CpG -61247 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_286_189_0.295708029270375_7.71770962296613_1.29904444784313 chr1 62719187 62721998 + 1.29904444784313 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 17275 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_105_61_0.484518765309741_6.19645569304175_1.29803038895612 chr5 121584047 121584978 + 1.29803038895612 NA intron (NM_009656, intron 1 of 12) intron (NM_009656, intron 1 of 12) 9312 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak1_105_61_0.484518765309741_6.19645569304175_1.29803038895612 chr4 63544863 63545583 + 1.29803038895612 NA intron (NM_024173, intron 1 of 2) CpG 458 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_73_87_-0.535525857153099_6.19166869006075_1.29803038895611 chr12 54861926 54862846 + 1.29803038895611 NA intron (NM_007688, intron 1 of 3) CpG 491 NM_007688 12632 Mm.276826 NM_007688 ENSMUSG00000062929 Cfl2 - cofilin 2, muscle protein-coding common_peak2_73_87_-0.535525857153099_6.19166869006075_1.29803038895611 chr7 64287679 64288409 + 1.29803038895611 NA intron (NM_172742, intron 1 of 15) CpG 374 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_199_204_-0.331291196499627_7.51383450125563_1.29772649655676 chr17 26506240 26509045 + 1.29772649655676 NA exon (NM_013642, exon 2 of 4) exon (NM_013642, exon 2 of 4) 830 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_98_56_0.507956592887227_6.08686831060835_1.29723774271955 chr10 111594752 111595724 + 1.29723774271955 NA promoter-TSS (NR_045344) promoter-TSS (NR_045344) -965 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_67_81_-0.554776126854876_6.08016394119065_1.29723774271955 chr1 88474984 88475423 + 1.29723774271955 NA Intergenic Intergenic 34863 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding common_peak1_98_56_0.507956592887227_6.08686831060835_1.29723774271955-2 chr11 120238797 120240670 + 1.29723774271955 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 6786 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_98_56_0.507956592887227_6.08686831060835_1.29723774271955 chr14 54463915 54465007 + 1.29723774271955 NA 5' UTR (NM_022993, exon 1 of 7) 5' UTR (NM_022993, exon 1 of 7) 314 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding common_peak1_67_81_-0.554776126854876_6.08016394119065_1.29723774271955-2 chr4 44167182 44167999 + 1.29723774271955 NA promoter-TSS (NM_175201) promoter-TSS (NM_175201) -52 NM_175201 73469 Mm.262859 NM_175201 ENSMUSG00000035696 Rnf38 1700065B19Rik|2610202O07Rik|AA673263|Oip1 ring finger protein 38 protein-coding common_peak2_98_56_0.507956592887227_6.08686831060835_1.29723774271955-2 chr7 18857926 18858662 + 1.29723774271955 NA exon (NM_153760, exon 4 of 5) exon (NM_153760, exon 4 of 5) 18328 NM_153760 243864 Mm.233503 NM_153760 ENSMUSG00000040987 Mill2 Micb MHC I like leukocyte 2 protein-coding common_peak2_67_81_-0.554776126854876_6.08016394119065_1.29723774271955 chr13 94284542 94285768 + 1.29723774271955 NA intron (NM_001346609, intron 1 of 8) CpG 126 NM_029153 107767 Mm.201455 NM_029153 ENSMUSG00000021687 Scamp1 4930505M11Rik|AI415563|AW122395 secretory carrier membrane protein 1 protein-coding common_peak2_67_81_-0.554776126854876_6.08016394119065_1.29723774271955-2 chr5 32134597 32135633 + 1.29723774271955 NA Intergenic CpG -1357 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_255_254_-0.292533310934039_7.84808678139184_1.29723297921205 chr15 61531485 61533963 + 1.29723297921205 NA Intergenic Intergenic 241727 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA common_peak2_116_128_-0.431072856086476_6.79569082738002_1.29710740426899 chr6 91205996 91207568 + 1.29710740426899 NA Intergenic Intergenic -5982 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_156_96_0.401504468837278_6.80066507660577_1.29710740426899 chr11 116532430 116533683 + 1.29710740426899 NA promoter-TSS (NM_025367) promoter-TSS (NM_025367) -182 NM_025367 20698 Mm.20944 NM_011451 ENSMUSG00000061878 Sphk1 1110006G24Rik|Sk1|Spk1 sphingosine kinase 1 protein-coding common_peak1_65_34_0.630727987879548_5.44464701088474_1.29674067475645-2 chr7 80027085 80027891 + 1.29674067475645 NA intron (NM_175433, intron 1 of 4) CpG 1260 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding unique_peak1_65_34_0.630727987879548_5.44464701088474_1.29674067475645-2 chr7 74347329 74348097 + 1.29674067475645 NA intron (NM_001038643, intron 3 of 10) intron (NM_001038643, intron 3 of 10) 207067 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_65_34_0.630727987879548_5.44464701088474_1.29674067475645 chr17 44777274 44778085 + 1.29674067475645 NA intron (NM_178652, intron 1 of 11) intron (NM_178652, intron 1 of 11) 513 NM_178652 109115 Mm.431327 NM_178652 ENSMUSG00000038954 Supt3 2310066G22Rik|AI315192|SPT3|SPT3L|Supt3h suppressor of Ty 3 protein-coding common_peak1_65_34_0.630727987879548_5.44464701088474_1.29674067475645 chr15 80263627 80264204 + 1.29674067475645 NA intron (NM_175109, intron 2 of 3) CpG 391 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding common_peak1_71_38_0.599254050237212_5.58502924398085_1.2961267095697-2 chr3 103988553 103989217 + 1.2961267095697 NA intron (NM_013629, intron 8 of 18) intron (NM_013629, intron 8 of 18) -20569 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA unique_peak1_71_38_0.599254050237212_5.58502924398085_1.2961267095697 chr8 26015227 26016032 + 1.2961267095697 NA promoter-TSS (NM_008033) promoter-TSS (NM_008033) -28 NM_008033 14272 Mm.3496 NM_008033 ENSMUSG00000015994 Fnta FTA farnesyltransferase, CAAX box, alpha protein-coding common_peak2_71_38_0.599254050237212_5.58502924398085_1.2961267095697 chr15 38919362 38919769 + 1.2961267095697 NA Intergenic Intergenic -14344 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_45_59_-0.664037293812264_5.57487194870239_1.2961267095697 chr17 24886717 24887244 + 1.2961267095697 NA promoter-TSS (NM_001355396) promoter-TSS (NM_001355396) 306 NM_001163751 79043 Mm.274794 NM_027141 ENSMUSG00000024160 Spsb3 2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204 splA/ryanodine receptor domain and SOCS box containing 3 protein-coding unique_peak1_71_38_0.599254050237212_5.58502924398085_1.2961267095697-2 chr9 33858890 33860177 + 1.2961267095697 NA Intergenic Intergenic -182838 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik TH-cre|Tg(Th-cre)1Tmd RIKEN cDNA 7630403G23 gene ncRNA common_peak1_71_38_0.599254050237212_5.58502924398085_1.2961267095697 chr2 137704966 137705949 + 1.2961267095697 NA Intergenic Intergenic -551127 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_71_38_0.599254050237212_5.58502924398085_1.2961267095697-3 chr9 45838649 45839495 + 1.2961267095697 NA exon (NM_001145947, exon 1 of 8) exon (NM_001145947, exon 1 of 8) 527 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak2_210_214_-0.323305895430824_7.58653990187405_1.29534908348835 chr14 7870506 7872046 + 1.29534908348835 NA intron (NM_001081427, intron 3 of 45) intron (NM_001081427, intron 3 of 45) 53319 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_87_100_-0.486091059727979_6.41516595288781_1.29523612482169 chr19 56821673 56822167 + 1.29523612482169 NA Intergenic CpG -4289 NM_001002238 83561 Mm.247541 NM_031387 ENSMUSG00000025081 Tdrd1 MTR-1 tudor domain containing 1 protein-coding common_peak1_109_121_-0.438960015785193_6.71125732967029_1.29361667078054 chr2 167491841 167493368 + 1.29361667078054 NA promoter-TSS (NM_030743) promoter-TSS (NM_030743) -41 NM_030743 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding common_peak2_94_107_-0.473122128437687_6.51832643794462_1.29225266111787 chr1 43256350 43257856 + 1.29225266111787 NA Intergenic MER47B|DNA|TcMar-Tigger -60342 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_102_114_-0.447902685886148_6.6215387080013_1.29187454690503 chr4 129032412 129033484 + 1.29187454690503 NA Intergenic Intergenic -25323 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_240_156_0.320703277216663_7.45497238749996_1.29019825424853 chr7 59228007 59229912 + 1.29019825424853 NA 5' UTR (NM_173010, exon 1 of 9) 5' UTR (NM_173010, exon 1 of 9) 209 NM_173010 22215 Mm.9002 NM_011668 ENSMUSG00000025326 Ube3a 4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a ubiquitin protein ligase E3A protein-coding common_peak1_222_225_-0.316054289430971_7.6621518176997_1.28937286458003 chr13 58127727 58129629 + 1.28937286458003 NA promoter-TSS (NM_029872) promoter-TSS (NM_029872) -122 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak1_85_47_0.554225049915033_5.86207502567867_1.28925578802557-2 chr5 130254776 130255460 + 1.28925578802557 NA promoter-TSS (NM_178897) promoter-TSS (NM_178897) 412 NM_023248 66711 Mm.280484 NM_023248 ENSMUSG00000025337 Sbds 4733401P19Rik|AI836084|CGI-97|SDS SBDS ribosome maturation factor protein-coding common_peak2_85_47_0.554225049915033_5.86207502567867_1.28925578802557 chr8 26887432 26888205 + 1.28925578802557 NA Intergenic Intergenic -63395 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_84_47_0.53747027579593_5.85369763861912_1.28925578802557-2 chr16 90220780 90221577 + 1.28925578802557 NA intron (NM_011434, intron 1 of 4) CpG 436 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding common_peak2_56_70_-0.599748062732081_5.84987308813864_1.28925578802557 chr10 80292524 80293011 + 1.28925578802557 NA intron (NM_001310726, intron 1 of 3) CpG 258 NM_001310726 20054 Mm.643 NM_009091 ENSMUSG00000063457 Rps15 rig ribosomal protein S15 protein-coding common_peak1_84_47_0.53747027579593_5.85369763861912_1.28925578802557 chr14 34310771 34311551 + 1.28925578802557 NA promoter-TSS (NM_029389) promoter-TSS (NM_029389) 434 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding unique_peak1_85_47_0.554225049915033_5.86207502567867_1.28925578802557 chr1 136696635 136697490 + 1.28925578802557 NA intron (NR_037986, intron 1 of 4) intron (NR_037986, intron 1 of 4) 851 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak2_56_70_-0.599748062732081_5.84987308813864_1.28925578802557-2 chr17 84188196 84189026 + 1.28925578802557 NA promoter-TSS (NM_001001806) promoter-TSS (NM_001001806) -664 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_85_47_0.554225049915033_5.86207502567867_1.28925578802557 chr5 33378834 33379436 + 1.28925578802557 NA intron (NR_153107, intron 1 of 13) intron (NR_153107, intron 1 of 13) 439 NM_001081101 71101 Mm.132178 NM_027674 ENSMUSG00000037355 Uvssa 4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530 UV stimulated scaffold protein A protein-coding unique_peak1_84_47_0.53747027579593_5.85369763861912_1.28925578802557 chr8 70723773 70724648 + 1.28925578802557 NA 5' UTR (NM_001310465, exon 1 of 17) 5' UTR (NM_001310465, exon 1 of 17) 146 NM_201607 110385 Mm.255180 NM_201607 ENSMUSG00000031842 Pde4c Dpde1|E130301F19Rik|dunce phosphodiesterase 4C, cAMP specific protein-coding unique_peak1_54_27_0.691477379293335_5.15309361170427_1.28863469260242-2 chr14 101640155 101640737 + 1.28863469260242 NA promoter-TSS (NM_001033132) promoter-TSS (NM_001033132) 25 NM_001033132 66200 Mm.250474 NM_001033132 ENSMUSG00000075486 Commd6 1110059J08Rik|1700063H17Rik COMM domain containing 6 protein-coding common_peak2_32_45_-0.756495971659255_5.14531397022739_1.28863469260242 chr6 71992277 71992652 + 1.28863469260242 NA Intergenic Intergenic 50064 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak2_54_27_0.691477379293335_5.15309361170427_1.28863469260242-2 chr14 54360908 54361398 + 1.28863469260242 NA intron (NM_026936, intron 1 of 9) CpG 312 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding unique_peak1_54_27_0.691477379293335_5.15309361170427_1.28863469260242-3 chr17 17909430 17910168 + 1.28863469260242 NA Intergenic Intergenic 21975 NM_008039 14289 Mm.378918 NM_008039 ENSMUSG00000052270 Fpr2 E330010I07Rik|Fpr-rs2 formyl peptide receptor 2 protein-coding common_peak2_54_27_0.691477379293335_5.15309361170427_1.28863469260242 chr1 172082303 172082612 + 1.28863469260242 NA promoter-TSS (NM_009938) promoter-TSS (NM_009938) -72 NM_009938 12847 Mm.30041 NM_009938 ENSMUSG00000026553 Copa AU040324|xenin coatomer protein complex subunit alpha protein-coding common_peak2_32_45_-0.756495971659255_5.14531397022739_1.28863469260242-2 chr8 27106248 27106859 + 1.28863469260242 NA intron (NM_054044, intron 2 of 18) intron (NM_054044, intron 2 of 18) 20712 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak2_54_27_0.691477379293335_5.15309361170427_1.28863469260242-3 chr19 5724111 5724390 + 1.28863469260242 NA intron (NM_001114595, intron 1 of 17) intron (NM_001114595, intron 1 of 17) 2067 NM_001114595 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding unique_peak1_54_27_0.691477379293335_5.15309361170427_1.28863469260242 chr10 80249258 80249976 + 1.28863469260242 NA intron (NM_029272, intron 1 of 7) intron (NM_029272, intron 1 of 7) 165 NM_029272 75406 Mm.28712 NM_029272 ENSMUSG00000020153 Ndufs7 1010001M04Rik NADH dehydrogenase (ubiquinone) Fe-S protein 7 protein-coding common_peak1_54_27_0.691477379293335_5.15309361170427_1.28863469260242-2 chr19 10881839 10882305 + 1.28863469260242 NA promoter-TSS (NM_134142) promoter-TSS (NM_134142) -329 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding common_peak1_54_27_0.691477379293335_5.15309361170427_1.28863469260242-3 chr7 16404817 16405417 + 1.28863469260242 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 3921 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_54_27_0.691477379293335_5.15309361170427_1.28863469260242 chr10 116996004 116996625 + 1.28863469260242 NA intron (NM_001007583, intron 4 of 9) intron (NM_001007583, intron 4 of 9) 10000 NM_001007583 382427 Mm.339322 NM_001007583 ENSMUSG00000020169 Best3 Vmd2l3|mBest4 bestrophin 3 protein-coding common_peak1_32_45_-0.756495971659255_5.14531397022739_1.28863469260242 chr19 4099975 4100436 + 1.28863469260242 NA promoter-TSS (NM_008851) promoter-TSS (NM_008851) 207 NR_075078 18739 Mm.1860 NM_008851 ENSMUSG00000024851 Pitpnm1 DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1 phosphatidylinositol transfer protein, membrane-associated 1 protein-coding common_peak2_32_45_-0.756495971659255_5.14531397022739_1.28863469260242-3 chr9 104981496 104982174 + 1.28863469260242 NA intron (NM_028719, intron 7 of 15) intron (NM_028719, intron 7 of 15) -71433 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_143_153_-0.389185251168684_7.07219391511056_1.28534677085439 chr4 83323077 83324279 + 1.28534677085439 NA intron (NM_027238, intron 1 of 19) CpG 511 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-7 chr2 31471564 31472111 + 1.28534286439186 NA intron (NR_002687, intron 1 of 15) intron (NR_002687, intron 1 of 15) 1529 NR_002687 432466 Mm.333323 NR_002687 ENSMUSG00000046687 Gm5424 EG432466 argininosuccinate synthase pseudogene pseudo unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-13 chr9 57426163 57426918 + 1.28534286439186 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 13196 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_34_15_0.851355992545804_4.4256779962729_1.28534286439186 chr8 104384453 104384773 + 1.28534286439186 NA intron (NM_153582, intron 1 of 3) B1_Mur4|SINE|Alu 11194 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-3 chr6 86438873 86439105 + 1.28534286439186 NA 5' UTR (NM_001243741, exon 1 of 10) 5' UTR (NM_001243741, exon 1 of 10) 343 NM_001243741 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-5 chr16 93187150 93187762 + 1.28534286439186 NA Intergenic Intergenic 165733 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-4 chr14 66818397 66818975 + 1.28534286439186 NA intron (NM_009955, intron 8 of 13) intron (NM_009955, intron 8 of 13) 49914 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-10 chr4 103369800 103370308 + 1.28534286439186 NA Intergenic Intergenic -12446 NR_040673 622167 Mm.244115 NR_040673 ENSMUSG00000086136 Gm12718 - predicted gene 12718 ncRNA unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-3 chr13 95521708 95522343 + 1.28534286439186 NA intron (NM_007974, intron 1 of 1) intron (NM_007974, intron 1 of 1) 3215 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-4 chr7 16923532 16923954 + 1.28534286439186 NA intron (NM_007590, intron 1 of 5) CpG 289 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|Cam3|Camc|R75142 calmodulin 3 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-2 chr11 31607738 31608358 + 1.28534286439186 NA Intergenic Intergenic 63814 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-6 chr17 79583888 79584606 + 1.28534286439186 NA Intergenic Intergenic -30653 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-6 chr9 114639601 114640056 + 1.28534286439186 NA intron (NM_153585, intron 1 of 19) CpG 372 NM_153585 78893 Mm.283708 NM_153585 ENSMUSG00000056167 Cnot10 2600001P13Rik CCR4-NOT transcription complex, subunit 10 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186 chr1 71751468 71752108 + 1.28534286439186 NA Intergenic Intergenic 98453 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186 chr2 31758113 31758644 + 1.28534286439186 NA intron (NM_001283047, intron 2 of 11) intron (NM_001283047, intron 2 of 11) -1561 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-9 chr4 100101165 100101647 + 1.28534286439186 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 5615 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-12 chr7 51270739 51271147 + 1.28534286439186 NA Intergenic Intergenic -240086 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-5 chr8 33818473 33819014 + 1.28534286439186 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -70973 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-8 chr2 167550617 167551424 + 1.28534286439186 NA Intergenic B1F|SINE|Alu 12825 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-11 chr5 69591882 69592245 + 1.28534286439186 NA intron (NM_001359239, intron 1 of 6) CpG 241 NM_001347363 67980 Mm.33830 NM_027681 ENSMUSG00000029209 Gnpda2 4921523I18Rik|4933412A11Rik|BB189630|GNPDA|Gnp2|Sb52|mKIAA4008 glucosamine-6-phosphate deaminase 2 protein-coding common_peak1_34_15_0.851355992545804_4.4256779962729_1.28534286439186-2 chr3 95732509 95732826 + 1.28534286439186 NA Intergenic Intergenic 2306 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA unique_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-3 chr6 25808768 25809169 + 1.28534286439185 NA intron (NM_133931, intron 1 of 17) intron (NM_133931, intron 1 of 17) 258 NM_133931 101185 Mm.274589 NM_133931 ENSMUSG00000029676 Pot1a 1500031H18Rik|AI851169|Pot1 protection of telomeres 1A protein-coding common_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-3 chr5 100569476 100569973 + 1.28534286439185 NA intron (NM_139198, intron 1 of 4) intron (NM_139198, intron 1 of 4) 2481 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding unique_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-2 chr5 134957832 134958344 + 1.28534286439185 NA Intergenic Intergenic -11154 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding common_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-5 chr9 41805155 41805644 + 1.28534286439185 NA Intergenic Intergenic 223473 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-2 chr15 58257318 58257551 + 1.28534286439185 NA Intergenic Intergenic -42542 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding unique_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185 chr3 57736351 57736910 + 1.28534286439185 NA intron (NR_130743, intron 1 of 9) intron (NR_130743, intron 1 of 9) 573 NR_130743 24017 Mm.274360 NM_011883 ENSMUSG00000036503 Rnf13 2010001H16Rik|Rzf ring finger protein 13 protein-coding unique_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-4 chrX 85574077 85574600 + 1.28534286439185 NA intron (NM_001358447, intron 1 of 9) CpG 316 NM_025729 66724 Mm.119646 NM_025729 ENSMUSG00000035476 Tab3 4921526G09Rik|Map3k7ip3|mKIAA4135 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding common_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185 chr11 72111030 72111410 + 1.28534286439185 NA intron (NM_001024927, intron 3 of 19) intron (NM_001024927, intron 3 of 19) 24669 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak2_17_29_-1.00812436736257_4.40282841192723_1.28534286439185-4 chr7 28946430 28946935 + 1.28534286439185 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 15650 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_106_62_0.474886113529242_6.21472298026454_1.2846003850156 chr11 93996190 93997072 + 1.2846003850156 NA intron (NM_027569, intron 1 of 28) CpG 540 NM_027569 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_177_111_0.37389732476908_6.99430358444214_1.28448873520002 chr11 97781401 97782789 + 1.28448873520002 NA promoter-TSS (NR_028078) promoter-TSS (NR_028078) -329 NR_028078 100302498 Mm.453536 NR_028078 ENSMUSG00000064901 Snora21 MBI-3 small nucleolar RNA, H/ACA box 21 snoRNA common_peak2_135_145_-0.394103660690054_6.99277272853499_1.28448873520002 chr19 5388874 5390331 + 1.28448873520002 NA promoter-TSS (NM_016882) promoter-TSS (NM_016882) -899 NM_016882 20227 Mm.34562 NM_016882 ENSMUSG00000039148 Sart1 U5-110K squamous cell carcinoma antigen recognized by T cells 1 protein-coding common_peak1_135_145_-0.394103660690054_6.99277272853499_1.28448873520002 chr6 56796855 56798346 + 1.28448873520002 NA promoter-TSS (NM_001362209) promoter-TSS (NM_001362209) 213 NM_001362210 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_62_76_-0.573416242448067_5.98007841947087_1.28400020807614 chr5 34636088 34637131 + 1.28400020807614 NA exon (NM_001356979, exon 2 of 13) exon (NM_001356979, exon 2 of 13) 603 NM_001356978 68294 Mm.34564 NM_026660 ENSMUSG00000001082 Mfsd10 0610009O03Rik|Tetran major facilitator superfamily domain containing 10 protein-coding common_peak1_92_52_0.523364687217038_5.98960279817172_1.28400020807613 chr15 101372848 101373640 + 1.28400020807613 NA Intergenic Intergenic -3119 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak1_122_73_0.442341804198943_6.43062426772842_1.28370758086451 chr12 3365195 3366462 + 1.28370758086451 NA 5' UTR (NM_008445, exon 1 of 8) 5' UTR (NM_008445, exon 1 of 8) 696 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak2_343_231_0.267096596362127_7.99152929330864_1.28347804276582 chr15 98870714 98872723 + 1.28347804276582 NA promoter-TSS (NM_001033276) promoter-TSS (NM_001033276) -513 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak1_69_82_-0.530738418374366_6.10967022215974_1.28274482643494 chr10 80602506 80603631 + 1.28274482643494 NA intron (NM_019575, intron 1 of 6) CpG 186 NM_019575 56214 Mm.273170 NM_019575 ENSMUSG00000113949 Scamp4 2410022D05Rik|AI448940|AU022392|AW742369|Sc4 secretory carrier membrane protein 4 protein-coding common_peak2_99_57_0.497262887451492_6.10661243885332_1.28274482643493 chr11 86357903 86358324 + 1.28274482643493 NA promoter-TSS (NM_001080931) promoter-TSS (NM_001080931) -588 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding common_peak2_99_57_0.497262887451492_6.10661243885332_1.28274482643493-2 chr19 38592162 38593281 + 1.28274482643493 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 68524 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak1_140_85_0.421177171254167_6.63685334032918_1.28189032204423 chr11 5955216 5956631 + 1.28189032204423 NA exon (NM_019661, exon 1 of 7) exon (NM_019661, exon 1 of 7) 165 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak2_131_79_0.431027930363907_6.53744206006932_1.28156456703858 chr15 89122419 89123654 + 1.28156456703858 NA TTS (NR_028449) TTS (NR_028449) 114 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak2_95_108_-0.471418637478163_6.53247500603784_1.28156456703858 chr10 27988374 27989951 + 1.28156456703858 NA Intergenic Intergenic -85658 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak1_78_43_0.558136047637979_5.73849964245629_1.28101570649119-2 chr3 130054155 130055539 + 1.28101570649119 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 6060 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak1_78_43_0.558136047637979_5.73849964245629_1.28101570649119 chr17 31564989 31565723 + 1.28101570649119 NA intron (NM_016670, intron 1 of 10) CpG 583 NM_016670 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak2_51_65_-0.625910924476584_5.73143865712016_1.28101570649118 chr15 80219163 80220027 + 1.28101570649118 NA Intergenic Intergenic -14485 NM_001357659 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_51_65_-0.625910924476584_5.73143865712016_1.28101570649118 chr10 80292574 80292965 + 1.28101570649118 NA intron (NM_001310726, intron 1 of 3) CpG 260 NM_001310726 20054 Mm.643 NM_009091 ENSMUSG00000063457 Rps15 rig ribosomal protein S15 protein-coding common_peak2_51_65_-0.625910924476584_5.73143865712016_1.28101570649118-2 chr8 26362725 26363352 + 1.28101570649118 NA Intergenic Intergenic 204869 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_153_162_-0.374948681633132_7.16125381341451_1.28075331295121 chr11 69394707 69396195 + 1.28075331295121 NA promoter-TSS (NM_030083) promoter-TSS (NM_030083) -105 NM_001045525 327951 Mm.415669 NM_001045525 ENSMUSG00000044795 Cyb5d1 Gm740 cytochrome b5 domain containing 1 protein-coding common_peak1_188_119_0.360260325292526_7.08702075825478_1.27809558433092 chr3 96171846 96173386 + 1.27809558433092 NA TTS (NM_181409) TTS (NM_181409) 110 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak2_37_50_-0.703261887426348_5.32079439825832_1.27788584093921-4 chr3 31022440 31022900 + 1.27788584093921 NA intron (NM_008857, intron 2 of 17) intron (NM_008857, intron 2 of 17) -16296 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak2_36_50_-0.741464600914053_5.30169304151447_1.27788584093921 chr4 136134842 136135588 + 1.27788584093921 NA Intergenic CpG -8607 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_36_50_-0.741464600914053_5.30169304151447_1.27788584093921-2 chr17 75551460 75551837 + 1.27788584093921 NA intron (NM_001357860, intron 1 of 6) CpG 298 NM_133747 72722 Mm.24641 NM_133747 ENSMUSG00000002017 Fam98a 2810405J04Rik|AL024114 family with sequence similarity 98, member A protein-coding common_peak2_37_50_-0.703261887426348_5.32079439825832_1.27788584093921 chr1 74600891 74601287 + 1.27788584093921 NA promoter-TSS (NM_175031) promoter-TSS (NM_175031) 308 NM_021313 57751 Mm.280920 NM_021313 ENSMUSG00000026171 Rnf25 0610009H16Rik|AO7 ring finger protein 25 protein-coding common_peak2_36_50_-0.741464600914053_5.30169304151447_1.27788584093921 chr14 32165230 32165954 + 1.27788584093921 NA promoter-TSS (NM_001284319) promoter-TSS (NM_001284319) 6 NM_001284319 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak2_36_50_-0.741464600914053_5.30169304151447_1.27788584093921-3 chr4 133814416 133814978 + 1.27788584093921 NA Intergenic Intergenic 60034 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_37_50_-0.703261887426348_5.32079439825832_1.27788584093921 chr5 129007760 129008482 + 1.27788584093921 NA intron (NR_152615, intron 1 of 11) intron (NR_152615, intron 1 of 11) 451 NR_152615 13852 Mm.260716 NM_007941 ENSMUSG00000029428 Stx2 AW538950|Epim|G1-536-1|Syn-2|repro34 syntaxin 2 protein-coding common_peak2_37_50_-0.703261887426348_5.32079439825832_1.27788584093921-3 chr17 13923941 13924576 + 1.27788584093921 NA Intergenic Intergenic -24115 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding unique_peak1_60_31_0.647156069302876_5.32357803465144_1.27788584093921 chr2 151904593 151905558 + 1.27788584093921 NA Intergenic Intergenic -6132 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_36_50_-0.741464600914053_5.30169304151447_1.27788584093921-4 chr8 24483837 24484574 + 1.27788584093921 NA TTS (NR_035483).2 TTS (NR_035483).2 781 NR_035483 common_peak1_60_31_0.647156069302876_5.32357803465144_1.27788584093921-2 chr15 27822163 27822951 + 1.27788584093921 NA intron (NM_001081302, intron 30 of 56) intron (NM_001081302, intron 30 of 56) -141015 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_60_31_0.647156069302876_5.32357803465144_1.27788584093921-3 chr2 91062270 91062985 + 1.27788584093921 NA non-coding (NR_110981, exon 8 of 8) non-coding (NR_110981, exon 8 of 8) 7688 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_60_31_0.647156069302876_5.32357803465144_1.27788584093921 chr12 76554443 76555421 + 1.27788584093921 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -7007 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_37_50_-0.703261887426348_5.32079439825832_1.27788584093921-5 chr4 125030109 125030528 + 1.27788584093921 NA intron (NM_145552, intron 1 of 15) intron (NM_145552, intron 1 of 15) 304 NM_145552 230737 Mm.90760 NM_145552 ENSMUSG00000028869 Gnl2 BC003262|HUMAUANTIG|Ngp-1 guanine nucleotide binding protein-like 2 (nucleolar) protein-coding common_peak1_60_31_0.647156069302876_5.32357803465144_1.27788584093921-4 chr5 136245531 136246501 + 1.27788584093921 NA Intergenic Intergenic -1076 NM_018825 23921 Mm.425294 NM_018825 ENSMUSG00000005057 Sh2b2 Aps SH2B adaptor protein 2 protein-coding common_peak2_37_50_-0.703261887426348_5.32079439825832_1.27788584093921-2 chr13 30544633 30545248 + 1.27788584093921 NA intron (NM_025710, intron 1 of 1) CpG 376 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding common_peak2_28_41_-0.81034942182825_4.98714271186464_1.27781945862486-2 chr8 91998463 91998936 + 1.27781945862486 NA Intergenic Intergenic -197045 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding common_peak2_28_41_-0.81034942182825_4.98714271186464_1.27781945862486 chr16 90830828 90831506 + 1.27781945862486 NA non-coding (NR_133572, exon 1 of 6) non-coding (NR_133572, exon 1 of 6) 308 NM_001316761 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding unique_peak2_28_41_-0.81034942182825_4.98714271186464_1.27781945862486 chr12 4082267 4082941 + 1.27781945862486 NA promoter-TSS (NM_153082) promoter-TSS (NM_153082) 30 NM_153082 217378 Mm.271656 NM_153082 ENSMUSG00000020657 Dnajc27 AI639580|C330021A05Rik|Rabj|Rbj DnaJ heat shock protein family (Hsp40) member C27 protein-coding common_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485 chr1 90100084 90100558 + 1.27781945862485 NA intron (NM_029122, intron 7 of 18) intron (NM_029122, intron 7 of 18) 53080 NM_029122 74918 Mm.317517 NM_029122 ENSMUSG00000026301 Iqca 4930465P12Rik|4930585L22Rik|BB288505|Iqca1 IQ motif containing with AAA domain protein-coding common_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-5 chr5 36722221 36722552 + 1.27781945862485 NA Intergenic Intergenic 26293 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding unique_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-2 chr16 13382117 13382613 + 1.27781945862485 NA intron (NM_153588, intron 4 of 14) intron (NM_153588, intron 4 of 14) 23944 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding unique_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-3 chr8 25805788 25806165 + 1.27781945862485 NA Intergenic Intergenic -2498 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding common_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-6 chr5 113592385 113593047 + 1.27781945862485 NA Intergenic Intergenic 42296 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-2 chr11 20895876 20896509 + 1.27781945862485 NA Intergenic Intergenic -65084 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_49_24_0.718442672377584_5.00307752596352_1.27781945862485 chr15 83173723 83174183 + 1.27781945862485 NA Intergenic B4A|SINE|B4 -1745 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding unique_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-4 chr9 66124334 66124831 + 1.27781945862485 NA intron (NM_019727, intron 1 of 14) intron (NM_019727, intron 1 of 14) 304 NM_019727 56440 Mm.271891 NM_019727 ENSMUSG00000032382 Snx1 - sorting nexin 1 protein-coding common_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-3 chr11 116198110 116198674 + 1.27781945862485 NA promoter-TSS (NM_027107) promoter-TSS (NM_027107) -463 NM_027107 69535 Mm.390347 NM_027107 ENSMUSG00000020778 Ten1 2310004N24Rik TEN1 telomerase capping complex subunit protein-coding common_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485-4 chr3 103171404 103172070 + 1.27781945862485 NA promoter-TSS (NM_026602) promoter-TSS (NM_026602) 82 NM_001356331 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding unique_peak1_49_24_0.718442672377584_5.00307752596352_1.27781945862485 chr10 77137627 77138487 + 1.27781945862485 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -24352 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_231_150_0.3223983229057_7.39960390077793_1.27747068200408 chr8 34145305 34147363 + 1.27747068200408 NA intron (NM_026609, intron 1 of 3) intron (NM_026609, intron 1 of 3) 405 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak1_220_142_0.331347691648893_7.32554518260284_1.27709373439746 chr11 59838842 59840635 + 1.27709373439746 NA promoter-TSS (NM_011991) promoter-TSS (NM_011991) 29 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding common_peak1_82_95_-0.496638879830238_6.33664306080604_1.27668833751242 chr18 66290987 66291852 + 1.27668833751242 NA intron (NM_178793, intron 1 of 10) CpG 419 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_115_68_0.459333585025853_6.3381912492911_1.2766883375124 chr4 138217164 138218179 + 1.2766883375124 NA intron (NM_001356432, intron 1 of 11) CpG 544 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak2_72_39_0.582487340678564_5.61317176522664_1.27570999829275-2 chr2 157567469 157567888 + 1.27570999829275 NA Intergenic Intergenic -1317 NM_016916 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak2_72_39_0.582487340678564_5.61317176522664_1.27570999829275 chr14 70519278 70520089 + 1.27570999829275 NA intron (NR_033241, intron 1 of 19) intron (NR_033241, intron 1 of 19) 577 NM_009755 12153 Mm.27757 NM_009755 ENSMUSG00000022098 Bmp1 Pcp|Tld bone morphogenetic protein 1 protein-coding common_peak1_72_39_0.582487340678564_5.61317176522664_1.27570999829275 chr7 126799635 126800077 + 1.27570999829275 NA promoter-TSS (NM_007438) promoter-TSS (NM_007438) 591 NM_001177308 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding unique_peak1_66_35_0.611628016198075_5.47573900954135_1.27423323032613 chr12 111572283 111573287 + 1.27423323032613 NA non-coding (NR_045295, exon 2 of 2) non-coding (NR_045295, exon 2 of 2) 1617 NR_045295 100504687 Mm.26072 NR_045295 ENSMUSG00000096995 2810029C07Rik AU017849 RIKEN cDNA 2810029C07 gene ncRNA common_peak1_66_35_0.611628016198075_5.47573900954135_1.27423323032613-4 chr8 120216800 120217426 + 1.27423323032613 NA intron (NR_110496, intron 2 of 2) intron (NR_110496, intron 2 of 2) 11117 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_66_35_0.611628016198075_5.47573900954135_1.27423323032613-2 chr6 125099023 125100003 + 1.27423323032613 NA intron (NM_001346610, intron 2 of 38) intron (NM_001346610, intron 2 of 38) 2489 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak2_41_55_-0.694820226038224_5.45994480903849_1.27423323032613 chr10 93453081 93453929 + 1.27423323032613 NA 5' UTR (NM_001313897, exon 1 of 18) 5' UTR (NM_001313897, exon 1 of 18) 109 NM_008517 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak1_66_35_0.611628016198075_5.47573900954135_1.27423323032613-3 chr8 14321132 14321679 + 1.27423323032613 NA intron (NM_172910, intron 3 of 15) MIR|SINE|MIR 225530 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding common_peak2_42_55_-0.661112391848172_5.47679872613352_1.27423323032613 chr5 45669148 45669672 + 1.27423323032613 NA promoter-TSS (NM_019438) promoter-TSS (NM_019438) 298 NR_073433 69788 Mm.381492 NR_073433 ENSMUSG00000104986 1600023N17Rik AV119442 RIKEN cDNA 1600023N17 gene ncRNA unique_peak2_41_55_-0.694820226038224_5.45994480903849_1.27423323032613 chr9 102779903 102780553 + 1.27423323032613 NA Intergenic Intergenic 40580 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_66_35_0.611628016198075_5.47573900954135_1.27423323032613 chr15 25621704 25622217 + 1.27423323032613 NA promoter-TSS (NM_019472) promoter-TSS (NM_019472) -590 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak2_41_55_-0.694820226038224_5.45994480903849_1.27423323032613-2 chr8 115701525 115702212 + 1.27423323032613 NA Intergenic Intergenic 5026 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_42_55_-0.661112391848172_5.47679872613352_1.27423323032613 chr4 125030020 125030588 + 1.27423323032613 NA intron (NM_145552, intron 1 of 15) intron (NM_145552, intron 1 of 15) 290 NM_145552 230737 Mm.90760 NM_145552 ENSMUSG00000028869 Gnl2 BC003262|HUMAUANTIG|Ngp-1 guanine nucleotide binding protein-like 2 (nucleolar) protein-coding common_peak2_66_35_0.611628016198075_5.47573900954135_1.27423323032613-3 chr9 7836246 7836926 + 1.27423323032613 NA intron (NM_007465, intron 1 of 7) intron (NM_007465, intron 1 of 7) 220 NM_001291503 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak1_66_35_0.611628016198075_5.47573900954135_1.27423323032613 chr3 121291830 121292612 + 1.27423323032613 NA intron (NR_155539, intron 1 of 2) intron (NR_155539, intron 1 of 2) 481 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_41_55_-0.694820226038224_5.45994480903849_1.27423323032613 chr9 21091400 21091992 + 1.27423323032613 NA intron (NR_038081, intron 1 of 16) CpG 292 NM_027911 71766 Mm.196137 NM_027911 ENSMUSG00000010205 Raver1 1300006N24Rik|AA050359|mKIAA1978 ribonucleoprotein, PTB-binding 1 protein-coding common_peak2_42_55_-0.661112391848172_5.47679872613352_1.27423323032613-2 chr8 11477042 11478005 + 1.27423323032613 NA promoter-TSS (NR_126558) promoter-TSS (NR_126558) -406 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_66_35_0.611628016198075_5.47573900954135_1.27423323032613-2 chr4 152297381 152297906 + 1.27423323032613 NA intron (NM_133788, intron 1 of 4) (CCGGA)n|Simple_repeat|Simple_repeat 429 NM_133788 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak2_155_163_-0.365288187082004_7.17490791107708_1.27396142677291 chr11 72503965 72505779 + 1.27396142677291 NA intron (NM_029932, intron 9 of 11) MIRc|SINE|MIR -14952 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207 chr10 79767226 79767566 + 1.27334590136207 NA promoter-TSS (NR_027505) promoter-TSS (NR_027505) -444 NR_027505 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding unique_peak2_21_33_-0.901232459080035_4.63684661171032_1.27334590136207 chr1 93618353 93618713 + 1.27334590136207 NA exon (NM_145519, exon 23 of 27) exon (NM_145519, exon 23 of 27) 17194 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-7 chr2 71545850 71546311 + 1.27334590136207 NA exon (NM_010054, exon 1 of 3) exon (NM_010054, exon 1 of 3) 674 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak2_39_18_0.794714449954845_4.64528473842101_1.27334590136207 chr11 80489141 80489506 + 1.27334590136207 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 12300 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207 chr1 131828089 131828686 + 1.27334590136207 NA 5' UTR (NM_173865, exon 1 of 11) 5' UTR (NM_173865, exon 1 of 11) 375 NM_173865 98396 Mm.389181 NM_173865 ENSMUSG00000013275 Slc41a1 AI573938|B230315F01Rik solute carrier family 41, member 1 protein-coding common_peak2_21_33_-0.901232459080035_4.63684661171032_1.27334590136207-3 chr4 150909225 150909733 + 1.27334590136207 NA intron (NM_020569, intron 1 of 6) intron (NM_020569, intron 1 of 6) 442 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-5 chr14 118566717 118567244 + 1.27334590136207 NA intron (NM_001163676, intron 18 of 29) intron (NM_001163676, intron 18 of 29) 25492 NR_105815 102465208 NR_105815 ENSMUSG00000098433 Mir6391 Gm27914|mmu-mir-6391 microRNA 6391 ncRNA common_peak2_39_18_0.794714449954845_4.64528473842101_1.27334590136207-2 chr8 25804926 25805301 + 1.27334590136207 NA Intergenic Intergenic -3361 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding unique_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-2 chr13 108604693 108605313 + 1.27334590136207 NA Intergenic Intergenic -49174 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding unique_peak2_21_33_-0.901232459080035_4.63684661171032_1.27334590136207-2 chr17 28256267 28256844 + 1.27334590136207 NA intron (NM_011145, intron 2 of 7) intron (NM_011145, intron 2 of 7) -15153 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-3 chr13 15562346 15562848 + 1.27334590136207 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 98874 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-8 chr7 19935633 19935897 + 1.27334590136207 NA Intergenic Intergenic -14622 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-6 chr18 65725342 65725764 + 1.27334590136207 NA intron (NM_177028, intron 6 of 14) intron (NM_177028, intron 6 of 14) 27285 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak2_21_33_-0.901232459080035_4.63684661171032_1.27334590136207-4 chr9 88480925 88481334 + 1.27334590136207 NA intron (NM_001284328, intron 1 of 11) intron (NM_001284328, intron 1 of 11) 1268 NM_001311113 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-2 chr11 101464633 101465092 + 1.27334590136207 NA intron (NM_012037, intron 1 of 5) intron (NM_012037, intron 1 of 5) 1337 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding common_peak2_21_33_-0.901232459080035_4.63684661171032_1.27334590136207 chr12 10490463 10491245 + 1.27334590136207 NA intron (NR_110487, intron 8 of 11) intron (NR_110487, intron 8 of 11) 44466 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA common_peak2_21_33_-0.901232459080035_4.63684661171032_1.27334590136207-2 chr18 61725863 61726253 + 1.27334590136207 NA promoter-TSS (NR_029432) promoter-TSS (NR_029432) 273 NM_021296 17714 Mm.269657 NM_021296 ENSMUSG00000024580 Grpel2 mt-GrpE#2|mt-Grpel2 GrpE-like 2, mitochondrial protein-coding common_peak1_39_18_0.794714449954845_4.64528473842101_1.27334590136207-4 chr14 57730265 57730751 + 1.27334590136207 NA intron (NM_153382, intron 1 of 1) intron (NM_153382, intron 1 of 1) 3910 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_124_74_0.446082090837063_6.45185973591441_1.27244447704216 chr15 62138943 62140347 + 1.27244447704216 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 79806 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_89_102_-0.482187359329879_6.44540684751828_1.27244447704216 chr11 17210905 17212330 + 1.27244447704216 NA promoter-TSS (NM_178909) promoter-TSS (NM_178909) -28 NM_025443 66249 Mm.27831 NM_025443 ENSMUSG00000020116 Pno1 1810003N24Rik|AA407421|AU015468|AU019495|AU042323|Emi3|Imi3 partner of NOB1 homolog protein-coding common_peak1_124_74_0.446082090837063_6.45185973591441_1.27244447704216-2 chr5 39636800 39637893 + 1.27244447704216 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 7285 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak1_89_102_-0.482187359329879_6.44540684751828_1.27244447704216 chr7 99979534 99980428 + 1.27244447704216 NA exon (NM_175388, exon 1 of 6) exon (NM_175388, exon 1 of 6) 477 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak1_86_48_0.541038779489512_5.88522923385996_1.27243322704912 chr11 16804313 16804874 + 1.27243322704912 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 52390 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_57_71_-0.595011980065046_5.87241901140979_1.27243322704912-2 chr18 33293930 33294773 + 1.27243322704912 NA Intergenic Intergenic -80489 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak2_57_71_-0.595011980065046_5.87241901140979_1.27243322704912 chr11 72796318 72797113 + 1.27243322704912 NA promoter-TSS (NM_001024926) promoter-TSS (NM_001024926) 489 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak1_58_71_-0.570523916119632_5.8846630433825_1.27243322704912 chr15 98092686 98093129 + 1.27243322704912 NA intron (NM_001163488, intron 1 of 22) CpG 318 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak1_58_71_-0.570523916119632_5.8846630433825_1.27243322704912-2 chr2 91730200 91730894 + 1.27243322704912 NA intron (NM_001080754, intron 1 of 18) intron (NM_001080754, intron 1 of 18) 409 NM_001080754 228361 Mm.436667 NM_172669 ENSMUSG00000040506 Ambra1 2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736 autophagy/beclin 1 regulator 1 protein-coding common_peak1_57_71_-0.595011980065046_5.87241901140979_1.27243322704912 chr4 136142754 136143540 + 1.27243322704912 NA promoter-TSS (NM_008321) promoter-TSS (NM_008321) -675 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak1_86_48_0.541038779489512_5.88522923385996_1.27243322704912-2 chr6 125165830 125166943 + 1.27243322704912 NA promoter-TSS (NM_008084) promoter-TSS (NM_008084) 81 NM_001289726 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak2_57_71_-0.595011980065046_5.87241901140979_1.27243322704912-3 chr5 101765208 101766165 + 1.27243322704912 NA intron (NM_173370, intron 1 of 12) intron (NM_173370, intron 1 of 12) 556 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak1_58_71_-0.570523916119632_5.8846630433825_1.27243322704912-3 chr5 3501986 3502667 + 1.27243322704912 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -41507 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_141_86_0.41462226628476_6.65025462899111_1.27210604883946 chr5 52189593 52190776 + 1.27210604883946 NA promoter-TSS (NR_015537) promoter-TSS (NR_015537) 362 NR_104311 13204 Mm.993 NM_007839 ENSMUSG00000029169 Dhx15 DBP1|DEAH9|Ddx15|HRH2|mDEAH9 DEAH (Asp-Glu-Ala-His) box polypeptide 15 protein-coding common_peak2_24_37_-0.878573671718033_4.80864067758457_1.27201509741564 chr1 91057387 91057947 + 1.27201509741564 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 4223 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_25_37_-0.822389338988472_4.83673284394935_1.27201509741564-2 chr2 31572262 31572527 + 1.27201509741564 NA promoter-TSS (NM_001033389) promoter-TSS (NM_001033389) -257 NM_001033389 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding unique_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-2 chr15 83156996 83157508 + 1.27201509741564 NA intron (NM_029787, intron 8 of 8) intron (NM_029787, intron 8 of 8) 7607 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA common_peak2_24_37_-0.878573671718033_4.80864067758457_1.27201509741564-6 chr9 45936419 45936802 + 1.27201509741564 NA promoter-TSS (NM_011526) promoter-TSS (NM_011526) -552 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding unique_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-6 chr7 99359643 99360170 + 1.27201509741564 NA Intergenic Intergenic -6667 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_24_37_-0.878573671718033_4.80864067758457_1.27201509741564-5 chr9 31321944 31322362 + 1.27201509741564 NA intron (NM_001080817, intron 3 of 20) intron (NM_001080817, intron 3 of 20) 7046 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding common_peak2_44_21_0.751936528789287_4.83539988303194_1.27201509741564-3 chr3 151298710 151299043 + 1.27201509741564 NA Intergenic Intergenic -139006 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_25_37_-0.822389338988472_4.83673284394935_1.27201509741564-3 chr4 46489341 46489824 + 1.27201509741564 NA intron (NM_053179, intron 1 of 5) CpG 253 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding unique_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-5 chr5 117134162 117134851 + 1.27201509741564 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 918 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-7 chr7 25832219 25832567 + 1.27201509741564 NA Intergenic Intergenic -15863 NM_028775 74134 Mm.275188 NM_028775 ENSMUSG00000040703 Cyp2s1 1200011C15Rik|AU041727|C79779 cytochrome P450, family 2, subfamily s, polypeptide 1 protein-coding unique_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564 chr1 93166009 93166640 + 1.27201509741564 NA Intergenic Intergenic -2099 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564 chr1 64826616 64827127 + 1.27201509741564 NA intron (NM_001039493, intron 6 of 7) intron (NM_001039493, intron 6 of 7) -89121 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-4 chr17 87225686 87226249 + 1.27201509741564 NA Intergenic Intergenic -31025 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak2_24_37_-0.878573671718033_4.80864067758457_1.27201509741564-4 chr5 108694252 108694808 + 1.27201509741564 NA 5' UTR (NM_001164259, exon 1 of 6) 5' UTR (NM_001164259, exon 1 of 6) 301 NM_054071 116701 Mm.35691 NM_054071 ENSMUSG00000008090 Fgfrl1 FGFR5|FGFR5beta|FGFR5gamma fibroblast growth factor receptor-like 1 protein-coding common_peak2_24_37_-0.878573671718033_4.80864067758457_1.27201509741564-2 chr15 89178214 89178629 + 1.27201509741564 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 2367 NM_001284506 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_25_37_-0.822389338988472_4.83673284394935_1.27201509741564 chr5 91987498 91987900 + 1.27201509741564 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 226 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding common_peak2_24_37_-0.878573671718033_4.80864067758457_1.27201509741564-3 chr16 8862023 8862422 + 1.27201509741564 NA Intergenic Intergenic 32122 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-8 chr7 28943528 28944234 + 1.27201509741564 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 18451 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-3 chr17 84365483 84366271 + 1.27201509741564 NA intron (NM_183021, intron 26 of 37) intron (NM_183021, intron 26 of 37) 100331 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak2_44_21_0.751936528789287_4.83539988303194_1.27201509741564 chr13 51202760 51203011 + 1.27201509741564 NA non-coding (NR_132443, exon 1 of 1) non-coding (NR_132443, exon 1 of 1) 181 NR_132443 667728 NR_132443 Hist1h2al EG667728 histone cluster 1, H2al pseudo common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-5 chr4 11965973 11966395 + 1.27201509741564 NA promoter-TSS (NR_040577) promoter-TSS (NR_040577) -203 NM_001290391 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak2_44_21_0.751936528789287_4.83539988303194_1.27201509741564-2 chr2 166154604 166154985 + 1.27201509741564 NA intron (NM_001355619, intron 1 of 21) CpG 491 NM_001355619 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-2 chr10 86104346 86104760 + 1.27201509741564 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 8699 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-4 chr5 115134277 115134903 + 1.27201509741564 NA intron (NM_175352, intron 1 of 4) CpG 385 NM_175352 106840 Mm.29241 NM_175352 ENSMUSG00000046562 Unc119b AA407659|AI414892 unc-119 lipid binding chaperone B protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-6 chr6 91729252 91729799 + 1.27201509741564 NA intron (NM_009320, intron 5 of 14) intron (NM_009320, intron 5 of 14) 45458 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_25_37_-0.822389338988472_4.83673284394935_1.27201509741564 chr13 84222374 84222969 + 1.27201509741564 NA promoter-TSS (NR_138587) promoter-TSS (NR_138587) 375 NM_175187 72745 Mm.295063 NM_175187 ENSMUSG00000035762 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B protein-coding common_peak1_44_21_0.751936528789287_4.83539988303194_1.27201509741564-3 chr16 76471448 76471927 + 1.27201509741564 NA Intergenic Intergenic -77108 NR_155449 102632730 NR_155449 Gm30726 - predicted gene, 30726 ncRNA common_peak1_232_151_0.319036921110742_7.40744597399896_1.27171850294586 chr13 75707554 75709261 + 1.27171850294586 NA intron (NM_138953, intron 1 of 11) CpG 923 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_108_63_0.478694885128446_6.23934744256422_1.27152917595657 chr3 81058113 81058689 + 1.27152917595657 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 21985 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_133_80_0.434648035182519_6.55717402047588_1.27110542229668 chr16 91547123 91548144 + 1.27110542229668 NA intron (NM_008338, intron 1 of 6) intron (NM_008338, intron 1 of 6) 539 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_97_109_-0.455056549731849_6.55383143865873_1.27110542229666 chr1 43170011 43171282 + 1.27110542229666 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) -6685 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_120_131_-0.416083358382129_6.83635244016739_1.2709507103958 chr6 97178634 97179540 + 1.2709507103958 NA promoter-TSS (NM_001081111) promoter-TSS (NM_001081111) 37 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak1_159_99_0.384675814477218_6.83619409701333_1.27095071039578-2 chr8 13757426 13758586 + 1.27095071039578 NA intron (NM_001357247, intron 1 of 16) intron (NM_001357247, intron 1 of 16) 350 NM_001357247 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak1_159_99_0.384675814477218_6.83619409701333_1.27095071039578 chr19 27217750 27219286 + 1.27095071039578 NA intron (NM_001161420, intron 1 of 17) intron (NM_001161420, intron 1 of 17) 1498 NM_001161420 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak1_216_219_-0.316306103970992_7.62320666153916_1.27014394812343 chr18 75493713 75494891 + 1.27014394812343 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -20343 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_484_336_0.220552712836611_8.50688113760016_1.26979819143284 chr13 28949124 28953462 + 1.26979819143284 NA 3' UTR (NM_009238, exon 1 of 1) 3' UTR (NM_009238, exon 1 of 1) 2406 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak2_137_147_-0.392819441178485_7.01304364503971_1.2692707174947 chr15 66577543 66578402 + 1.2692707174947 NA intron (NM_001081409, intron 1 of 20) CpG 400 NM_001081409 239510 Mm.267473 NM_178718 ENSMUSG00000072501 Phf20l1 CGI-72|E130113K22Rik PHD finger protein 20-like 1 protein-coding common_peak1_170_106_0.382312693025667_6.93262333291398_1.2691672174137 chr12 102286105 102288006 + 1.2691672174137 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 3414 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_170_106_0.382312693025667_6.93262333291398_1.2691672174137-2 chr19 7340672 7341718 + 1.2691672174137 NA exon (NM_007928, exon 1 of 18) exon (NM_007928, exon 1 of 18) 665 NM_001080389 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_63_77_-0.569472133790941_6.00066615196678_1.2687005592157-2 chr17 28142155 28143055 + 1.2687005592157 NA promoter-TSS (NM_001004366) promoter-TSS (NM_001004366) 79 NM_001004366 268935 Mm.258491 NM_001004366 ENSMUSG00000038677 Scube3 CEGF3|D030038I21Rik signal peptide, CUB domain, EGF-like 3 protein-coding common_peak1_93_53_0.511718821565342_6.01074691294614_1.2687005592157 chr8 126687192 126688604 + 1.2687005592157 NA Intergenic Intergenic -94462 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_64_77_-0.547262125226501_6.011771156249_1.2687005592157 chr17 36000683 36001525 + 1.2687005592157 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 6600 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_64_77_-0.547262125226501_6.011771156249_1.2687005592157 chr8 79711146 79711630 + 1.2687005592157 NA promoter-TSS (NM_001357235) promoter-TSS (NM_001357235) 352 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|RNS4I|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding common_peak1_63_77_-0.569472133790941_6.00066615196678_1.2687005592157 chr17 23997541 23998483 + 1.2687005592157 NA promoter-TSS (NM_133731) promoter-TSS (NM_133731) 88 NM_133731 70835 Mm.157351 NM_133731 ENSMUSG00000045027 Prss22 4733401N09Rik|BSSP-4|SP001LA protease, serine 22 protein-coding common_peak2_63_77_-0.569472133790941_6.00066615196678_1.2687005592157 chr19 27430125 27430767 + 1.2687005592157 NA promoter-TSS (NR_131940) promoter-TSS (NR_131940) 409 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA common_peak2_70_83_-0.52769668107203_6.12846908224275_1.26866979374127 chr9 67024451 67025879 + 1.26866979374127 NA intron (NM_001164256, intron 7 of 7) intron (NM_001164256, intron 7 of 7) 18706 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_100_58_0.486854849895572_6.12607047430963_1.26866979374127-2 chr2 90745643 90746391 + 1.26866979374127 NA intron (NM_018828, intron 1 of 16) CpG 647 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak2_100_58_0.486854849895572_6.12607047430963_1.26866979374127 chr14 52196616 52197445 + 1.26866979374127 NA intron (NM_033618, intron 1 of 25) CpG 209 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding common_peak1_100_58_0.486854849895572_6.12607047430963_1.26866979374127 chr8 117801136 117801863 + 1.26866979374127 NA intron (NM_001357233, intron 1 of 4) intron (NM_001357233, intron 1 of 4) 475 NM_001357233 68533 Mm.181836 NM_026758 ENSMUSG00000031843 Mphosph6 1110001M01Rik|AA536809|C86426 M phase phosphoprotein 6 protein-coding common_peak2_113_124_-0.42284020746273_6.75436418093072_1.26597998525015 chr2 117472352 117473780 + 1.26597998525015 NA Intergenic Intergenic -130189 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_113_124_-0.42284020746273_6.75436418093072_1.26597998525015 chr11 116332186 116333631 + 1.26597998525015 NA intron (NM_008240, intron 2 of 2) (TG)n|Simple_repeat|Simple_repeat 2446 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak2_176_182_-0.342518130307154_7.34444077313047_1.26506243497318 chr8 122146480 122148298 + 1.26506243497318 NA Intergenic Intergenic -134752 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_308_206_0.277881030213112_7.83242747260588_1.26478606996795 chr8 20550225 20551412 + 1.26478606996795 NA Intergenic Intergenic -64109 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak1_117_69_0.463063088804469_6.3608145613472_1.26475411759558 chr13 17211384 17212746 + 1.26475411759558 NA intron (NM_138654, intron 12 of 13) intron (NM_138654, intron 12 of 13) 482700 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_83_96_-0.494433125740992_6.35269627931663_1.26475411759558 chr5 3502936 3504187 + 1.26475411759558 NA intron (NM_009873, intron 5 of 7) B3|SINE|B2 -40272 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_191_121_0.358973370162631_7.1102240226442_1.26390991532103 chr4 152008888 152011116 + 1.26390991532103 NA intron (NM_001033352, intron 1 of 3) intron (NM_001033352, intron 1 of 3) 1111 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding common_peak1_190_121_0.35149284738413_7.10648376125495_1.26390991532103 chr15 80133135 80134426 + 1.26390991532103 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 626 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak1_80_44_0.561529356797939_5.77261777472864_1.26295166245271 chr11 72206050 72207363 + 1.26295166245271 NA promoter-TSS (NM_026559) promoter-TSS (NM_026559) 776 NR_155065 74477 Mm.289697 NM_028963 ENSMUSG00000020807 4933427D14Rik C85113|Kiaa0753|MNR RIKEN cDNA 4933427D14 gene protein-coding common_peak1_79_44_0.543733887495511_5.76372004007743_1.26295166245271 chr16 55555508 55556120 + 1.26295166245271 NA Intergenic Intergenic 61083 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_53_66_-0.593542339557612_5.76931802067897_1.26295166245271-3 chr5 115327089 115328199 + 1.26295166245271 NA intron (NR_036616, intron 1 of 4) CpG 467 NR_036616 108014 Mm.287826 NM_025573 ENSMUSG00000029538 Srsf9 25kDa|2610029M16Rik|SRp30c|Sfrs9 serine/arginine-rich splicing factor 9 protein-coding common_peak1_80_44_0.561529356797939_5.77261777472864_1.26295166245271-2 chr19 55244905 55245763 + 1.26295166245271 NA Intergenic MIRb|SINE|MIR -4098 NM_001081076 73707 Mm.489987 NM_001081076 ENSMUSG00000055523 Gucy2g 2410077I05Rik|GC-G guanylate cyclase 2g protein-coding common_peak2_53_66_-0.593542339557612_5.76931802067897_1.26295166245271 chr11 88179997 88180726 + 1.26295166245271 NA intron (NM_001172099, intron 2 of 9) intron (NM_001172099, intron 2 of 9) 10796 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_80_44_0.561529356797939_5.77261777472864_1.26295166245271-3 chr6 140622085 140622500 + 1.26295166245271 NA promoter-TSS (NM_178803) promoter-TSS (NM_178803) -371 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_80_44_0.561529356797939_5.77261777472864_1.26295166245271-4 chr7 108934396 108935256 + 1.26295166245271 NA intron (NM_025344, intron 1 of 7) intron (NM_025344, intron 1 of 7) 411 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak2_53_66_-0.593542339557612_5.76931802067897_1.26295166245271-2 chr2 26147996 26148737 + 1.26295166245271 NA Intergenic Intergenic -7860 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak2_53_66_-0.593542339557612_5.76931802067897_1.26295166245271-4 chr7 44929026 44929500 + 1.26295166245271 NA intron (NM_001077264, intron 1 of 22) CpG 227 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-15 chr3 89887841 89888040 + 1.26211192963361 NA intron (NM_010559, intron 3 of 9) intron (NM_010559, intron 3 of 9) 25256 NM_001310676 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-8 chr8 47599647 47599853 + 1.26211192963361 NA Intergenic FordPrefect|DNA|hAT-Tip100 66105 NM_203507 192174 Mm.273081 NM_203507 ENSMUSG00000031568 Rwdd4a BC016198|Gm1942|Rwdd4 RWD domain containing 4A protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-26 chr9 78623845 78624034 + 1.26211192963361 NA intron (NM_153098, intron 2 of 32) intron (NM_153098, intron 2 of 32) 8393 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-12 chr18 65706433 65706621 + 1.26211192963361 NA intron (NM_177028, intron 1 of 14) B2_Mm2|SINE|B2 8259 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-2 chr1 135405929 135406121 + 1.26211192963361 NA intron (NM_001357578, intron 10 of 24) intron (NM_001357578, intron 10 of 24) 24466 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-2 chr10 12802172 12802373 + 1.26211192963361 NA intron (NM_011682, intron 1 of 73) ID_B1|SINE|B4 59463 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-8 chr12 13021397 13021595 + 1.26211192963361 NA Intergenic B2_Mm2|SINE|B2 -79660 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-11 chr16 10842106 10842296 + 1.26211192963361 NA 3' UTR (NM_001162932, exon 2 of 2) 3' UTR (NM_001162932, exon 2 of 2) 7142 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-27 chr9 99716595 99716882 + 1.26211192963361 NA intron (NM_001194921, intron 1 of 4) intron (NM_001194921, intron 1 of 4) 529 NM_001194923 56492 Mm.386784 NM_019815 ENSMUSG00000032473 Cldn18 - claudin 18 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-14 chr2 156391795 156392002 + 1.26211192963361 NA non-coding (NR_024329, exon 1 of 1) non-coding (NR_024329, exon 1 of 1) 1081 NR_024329 347740 Mm.324242 NR_024329 ENSMUSG00000102869 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-3 chr15 75902219 75902479 + 1.26211192963361 NA intron (NM_001285431, intron 1 of 6) intron (NM_001285431, intron 1 of 6) 6995 NM_001285433 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-6 chr2 49546257 49546461 + 1.26211192963361 NA intron (NM_172663, intron 11 of 13) intron (NM_172663, intron 11 of 13) -72955 NM_008449 16574 Mm.256342 NM_008449 ENSMUSG00000026764 Kif5c KINN|Khc|NKHC|NKHC2 kinesin family member 5C protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-13 chr2 24521741 24521949 + 1.26211192963361 NA Intergenic Intergenic -46246 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-4 chr10 123072496 123072744 + 1.26211192963361 NA intron (NM_001163024, intron 1 of 34) B1_Mur1|SINE|Alu 3885 NM_001163024 67074 Mm.169924 NM_153395 ENSMUSG00000034602 Mon2 2610528O22Rik|AW495628|Sf21|mKIAA1040 MON2 homolog, regulator of endosome to Golgi trafficking protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-16 chr3 121372475 121372671 + 1.26211192963361 NA Intergenic Intergenic -53968 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-6 chr11 99660372 99660566 + 1.26211192963361 NA Intergenic MTD|LTR|ERVL-MaLR -1510 NM_001126320 100040248 Mm.340791 NM_001126320 ENSMUSG00000069718 Gm11563 2310045F10Rik predicted gene 11563 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-17 chr4 56490710 56490915 + 1.26211192963361 NA Intergenic Intergenic 250613 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-23 chr7 5081352 5081592 + 1.26211192963361 NA intron (NM_001252454, intron 1 of 10) MIRb|SINE|MIR 1237 NM_001252454 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-7 chr11 118005847 118006036 + 1.26211192963361 NA intron (NR_151726, intron 7 of 9) intron (NR_151726, intron 7 of 9) 3671 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-19 chr4 136592601 136592855 + 1.26211192963361 NA intron (NM_001347221, intron 2 of 19) intron (NM_001347221, intron 2 of 19) 9995 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-4 chr16 50028862 50029083 + 1.26211192963361 NA intron (NR_045935, intron 2 of 3) intron (NR_045935, intron 2 of 3) 43880 NR_045935 224180 Mm.146439 NM_175010 Gm4827 B130050K08|EG224180 predicted gene 4827 ncRNA unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-7 chr4 3789705 3789906 + 1.26211192963361 NA exon (NM_010747, exon 13 of 13) exon (NM_010747, exon 13 of 13) 45850 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-24 chr7 45803373 45803560 + 1.26211192963361 NA intron (NM_001005511, intron 15 of 15) L2|LINE|L2 10850 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-20 chr4 149233997 149234192 + 1.26211192963361 NA 3' UTR (NM_008441, exon 21 of 21) 3' UTR (NM_008441, exon 21 of 21) -67389 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-21 chr4 152379534 152379735 + 1.26211192963361 NA intron (NM_001081376, intron 30 of 41) intron (NM_001081376, intron 30 of 41) 40983 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361 chr1 35935450 35935650 + 1.26211192963361 NA Intergenic Intergenic -132850 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-5 chr11 83463257 83463471 + 1.26211192963361 NA promoter-TSS (NM_172797) promoter-TSS (NM_172797) -324 NM_080453 118453 Mm.264648 NM_080453 ENSMUSG00000020682 Mmp28 D130023P12 matrix metallopeptidase 28 (epilysin) protein-coding unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361 chr10 7061076 7061306 + 1.26211192963361 NA Intergenic MLT1A|LTR|ERVL-MaLR -38006 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-18 chr4 59642244 59642442 + 1.26211192963361 NA intron (NM_001015681, intron 1 of 3) B3|SINE|B2 16132 NM_153158 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-10 chr15 25939681 25939870 + 1.26211192963361 NA promoter-TSS (NM_001277315) promoter-TSS (NM_001277315) -927 NM_001277315 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-25 chr7 99130747 99130937 + 1.26211192963361 NA intron (NM_178635, intron 1 of 14) MER21C|LTR|ERVL 10302 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-22 chr6 29088655 29088865 + 1.26211192963361 NA Intergenic (CAA)n|Simple_repeat|Simple_repeat 28539 NM_008493 16846 Mm.277072 NM_008493 ENSMUSG00000059201 Lep ob|obese leptin protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-3 chr10 83042842 83043038 + 1.26211192963361 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 57443 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak2_1_6_-2.05614993912008_1.77927995249757_1.26211192963361-5 chr17 63799963 63800179 + 1.26211192963361 NA Intergenic B3A|SINE|B2 -63910 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding unique_peak1_6_2_0.960846552217258_2.06538577682978_1.26211192963361-9 chr14 63606644 63606843 + 1.26211192963361 NA exon (NM_173393, exon 1 of 3) exon (NM_173393, exon 1 of 3) 213 NM_173393 219149 Mm.32071 NM_173393 ENSMUSG00000035067 Xkr6 2700008G24Rik|BC024502|Xrg6 X-linked Kx blood group related 6 protein-coding common_peak2_181_114_0.36759721393838_7.02928865791356_1.26183746466528 chr19 38042662 38043798 + 1.26183746466528 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 347 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_33_46_-0.744757994341186_5.18220985450704_1.26138754964088-3 chr8 13648757 13649057 + 1.26138754964088 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 28680 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_33_46_-0.744757994341186_5.18220985450704_1.26138754964088 chr1 182513913 182514623 + 1.26138754964088 NA intron (NM_009794, intron 1 of 20) CT-rich|Low_complexity|Low_complexity 3342 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_55_28_0.666663119091108_5.19131255467313_1.26138754964088-2 chr13 34408977 34409620 + 1.26138754964088 NA Intergenic Intergenic -64116 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_33_46_-0.744757994341186_5.18220985450704_1.26138754964088 chr4 117288965 117289391 + 1.26138754964088 NA intron (NM_001310729, intron 4 of 13) CpG-10202 277 NM_001310730 66743 Mm.318331 NM_025739 ENSMUSG00000028677 Rnf220 4732477A13|4931406I20Rik|5730503K05Rik|AV302541 ring finger protein 220 protein-coding common_peak1_55_28_0.666663119091108_5.19131255467313_1.26138754964088 chr10 84727325 84728117 + 1.26138754964088 NA TTS (NM_027423) TTS (NM_027423) -28327 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding common_peak1_55_28_0.666663119091108_5.19131255467313_1.26138754964088-3 chr3 27607416 27607991 + 1.26138754964088 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -22708 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak2_33_46_-0.744757994341186_5.18220985450704_1.26138754964088-2 chr14 27070029 27070483 + 1.26138754964088 NA intron (NM_134437, intron 1 of 12) intron (NM_134437, intron 1 of 12) 31255 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak2_130_140_-0.397489043956403_6.94080683042059_1.26128067680062 chr2 30657816 30659103 + 1.26128067680062 NA non-coding (NR_136917, exon 4 of 4) non-coding (NR_136917, exon 4 of 4) 19552 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak1_134_81_0.42759676546271_6.57135038734944_1.26086791974381 chr12 112578236 112579635 + 1.26086791974381 NA Intergenic Intergenic -9849 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-8 chr4 132048543 132049037 + 1.26025077975594 NA intron (NM_183428, intron 1 of 20) CpG 288 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-19 chr6 35388632 35388866 + 1.26025077975594 NA Intergenic Intergenic 57903 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-2 chr12 70025765 70026268 + 1.26025077975594 NA intron (NM_001081453, intron 25 of 28) intron (NM_001081453, intron 25 of 28) -39014 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-3 chr17 78326706 78327271 + 1.26025077975594 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 91164 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594 chr1 77494961 77495472 + 1.26025077975594 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 1552 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-8 chr7 29908530 29908837 + 1.26025077975594 NA intron (NM_001243908, intron 1 of 4) intron (NM_001243908, intron 1 of 4) 166 NM_001243908 73729 Mm.333743 NM_001243908 ENSMUSG00000099689 Zfp383 1110003H10Rik zinc finger protein 383 protein-coding common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-5 chr17 84109509 84109925 + 1.26025077975594 NA Intergenic B3|SINE|B2 31057 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-3 chr2 164804563 164804818 + 1.26025077975594 NA promoter-TSS (NM_178375) promoter-TSS (NM_178375) 191 NM_133240 170789 Mm.277878 NM_133240 ENSMUSG00000017307 Acot8 PTE-2|Pte1 acyl-CoA thioesterase 8 protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-3 chr13 28738959 28739231 + 1.26025077975594 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -28222 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-8 chr19 7459764 7460250 + 1.26025077975594 NA intron (NM_001003933, intron 1 of 7) intron (NM_001003933, intron 1 of 7) 23284 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-6 chr8 119862420 119862830 + 1.26025077975594 NA intron (NM_146219, intron 1 of 4) intron (NM_146219, intron 1 of 4) 320 NM_146219 234796 Mm.86446 NM_146219 ENSMUSG00000031828 Klhl36 - kelch-like 36 protein-coding common_peak1_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-4 chrX 60404264 60404562 + 1.26025077975594 NA promoter-TSS (NM_001001798) promoter-TSS (NM_001001798) -408 NM_001037863 320940 Mm.490394 NM_001001798 ENSMUSG00000062949 Atp11c A330005H02Rik|AI315324|Ig ATPase, class VI, type 11C protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-7 chr2 94046171 94046641 + 1.26025077975594 NA intron (NM_019657, intron 7 of 10) ID4|SINE|ID -35676 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-5 chr11 103003719 103004001 + 1.26025077975594 NA intron (NM_026551, intron 1 of 4) intron (NM_026551, intron 1 of 4) -3939 NR_105896 102466988 NR_105896 ENSMUSG00000098613 Mir6931 Gm27303|mmu-mir-6931 microRNA 6931 ncRNA unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-14 chr3 89282078 89282640 + 1.26025077975594 NA Intergenic Intergenic -1408 NM_001162425 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-11 chr8 84799057 84799468 + 1.26025077975594 NA intron (NM_001081982, intron 1 of 9) CpG 1076 NM_010906 18032 Mm.9394 NM_010906 ENSMUSG00000001911 Nfix CTF|NF-I/X|NF1-X|NFI-X nuclear factor I/X protein-coding common_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-5 chr9 49055735 49056053 + 1.26025077975594 NA intron (NM_012039, intron 1 of 15) intron (NM_012039, intron 1 of 15) 313 NM_012039 26951 Mm.24791 NM_012039 ENSMUSG00000032264 Zw10 6330566F14Rik|MmZw10 zw10 kinetochore protein protein-coding common_peak2_31_13_0.915630142586947_4.26516999335108_1.26025077975594-2 chr3 107797119 107797331 + 1.26025077975594 NA Intergenic Intergenic -36756 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594 chr2 168072831 168073303 + 1.26025077975594 NA Intergenic Intergenic -7937 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-5 chr6 86733556 86733804 + 1.26025077975594 NA promoter-TSS (NM_011818) promoter-TSS (NM_011818) -302 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-3 chr15 31225210 31225465 + 1.26025077975594 NA intron (NM_146057, intron 1 of 3) intron (NM_146057, intron 1 of 3) 952 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594 chr11 120098338 120098648 + 1.26025077975594 NA promoter-TSS (NM_001110242) promoter-TSS (NM_001110242) 238 NM_183137 78777 Mm.23672 NM_183137 ENSMUSG00000025377 Tepsin 2410002I01Rik|Enthd2 TEPSIN, adaptor related protein complex 4 accessory protein protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-6 chr15 25624938 25625296 + 1.26025077975594 NA intron (NM_019472, intron 1 of 40) intron (NM_019472, intron 1 of 40) 2567 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak2_31_13_0.915630142586947_4.26516999335108_1.26025077975594 chr11 118365797 118366174 + 1.26025077975594 NA Intergenic Intergenic -10574 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-13 chr2 118757711 118758327 + 1.26025077975594 NA intron (NM_001001982, intron 9 of 10) intron (NM_001001982, intron 9 of 10) 4642 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-5 chr18 24756865 24757527 + 1.26025077975594 NA intron (NM_001289654, intron 2 of 24) intron (NM_001289654, intron 2 of 24) 48573 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-3 chr9 89874241 89874550 + 1.26025077975594 NA Intergenic Intergenic -35380 NM_001357744 19417 Mm.44561 NM_011245 ENSMUSG00000032356 Rasgrf1 AI844718|CDC25|CDC25Mm|Gnrp|Grf1|Grfbeta|P190-A|Ras-GRF1|p190|p190RhoGEF RAS protein-specific guanine nucleotide-releasing factor 1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-3 chr11 98586610 98587204 + 1.26025077975594 NA intron (NM_025661, intron 1 of 3) intron (NM_025661, intron 1 of 3) 338 NM_025661 66612 Mm.180546 NM_025661 ENSMUSG00000038150 Ormdl3 2810011N17Rik|AI315223 ORM1-like 3 (S. cerevisiae) protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-16 chr4 107487729 107488210 + 1.26025077975594 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 53250 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-9 chr8 64635201 64635630 + 1.26025077975594 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 57694 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-12 chr9 119037327 119037978 + 1.26025077975594 NA intron (NM_133710, intron 7 of 7) intron (NM_133710, intron 7 of 7) 5856 NR_029742 387218 NR_029742 ENSMUSG00000065513 Mir26a-1 Mirn26a|Mirn26a-1|miR-26a|mir-26a-1 microRNA 26a-1 ncRNA common_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-4 chr5 93096374 93096834 + 1.26025077975594 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 3188 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-9 chr19 10158470 10158855 + 1.26025077975594 NA Intergenic Intergenic -24226 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-20 chr9 57974053 57974428 + 1.26025077975594 NA Intergenic Intergenic -23784 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-10 chr19 55876358 55876599 + 1.26025077975594 NA intron (NR_138565, intron 4 of 15) intron (NR_138565, intron 4 of 15) -18843 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-3 chr8 125993044 125993404 + 1.26025077975594 NA Intergenic Intergenic -1878 NM_008430 16525 Mm.10800 NM_008430 ENSMUSG00000033998 Kcnk1 AI788889|TWIK-1 potassium channel, subfamily K, member 1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-4 chr11 101984415 101984746 + 1.26025077975594 NA intron (NM_028207, intron 1 of 2) CpG 211 NM_028207 72349 Mm.196295 NM_028207 ENSMUSG00000003518 Dusp3 2210015O03Rik|5031436O03Rik|T-DSP11|VHR dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-15 chr3 117038020 117038634 + 1.26025077975594 NA Intergenic Intergenic 39438 NR_038029 433646 Mm.158997 NR_038029 ENSMUSG00000028009 1700061I17Rik - RIKEN cDNA 1700061I17 gene ncRNA unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-10 chr8 79162536 79162990 + 1.26025077975594 NA intron (NM_001294279, intron 8 of 14) intron (NM_001294279, intron 8 of 14) 85820 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-18 chr6 30353306 30353680 + 1.26025077975594 NA Intergenic B1_Mus2|SINE|Alu 37527 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding unique_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-2 chr5 43809899 43810236 + 1.26025077975594 NA Intergenic Intergenic -8826 NM_009763 12182 Mm.246332 NM_009763 ENSMUSG00000029082 Bst1 114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65 bone marrow stromal cell antigen 1 protein-coding common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-7 chr5 3494023 3494384 + 1.26025077975594 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -49630 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594 chr11 96748138 96748612 + 1.26025077975594 NA intron (NM_001177898, intron 10 of 10) intron (NM_001177898, intron 10 of 10) 29180 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-2 chr11 4205671 4206042 + 1.26025077975594 NA exon (NM_134023, exon 2 of 9) exon (NM_134023, exon 2 of 9) -12395 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik|Castor1 GATS protein-like 3 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-17 chr4 135314180 135314666 + 1.26025077975594 NA Intergenic Intergenic 38791 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-6 chr2 122145719 122146244 + 1.26025077975594 NA intron (NM_026251, intron 2 of 17) intron (NM_026251, intron 2 of 17) -1706 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-2 chr2 90584584 90584830 + 1.26025077975594 NA Intergenic Intergenic -4060 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-2 chr11 103032681 103033064 + 1.26025077975594 NA intron (NM_008707, intron 1 of 11) PB1D7|SINE|Alu 4329 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-21 chrX 151016505 151017001 + 1.26025077975594 NA intron (NM_001168600, intron 1 of 15) intron (NM_001168600, intron 1 of 15) 540 NM_001168600 237107 Mm.45987 NM_198110 ENSMUSG00000025266 Gnl3l BC020354 guanine nucleotide binding protein-like 3 (nucleolar)-like protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-6 chr18 37969198 37969692 + 1.26025077975594 NA exon (NM_175684, exon 2 of 20) exon (NM_175684, exon 2 of 20) 286 NM_175684 319262 Mm.285060 NM_175684 ENSMUSG00000038524 Fchsd1 A030002D08Rik FCH and double SH3 domains 1 protein-coding common_peak1_15_26_-1.02484745794567_4.24246377319063_1.26025077975594 chr10 80167109 80167505 + 1.26025077975594 NA promoter-TSS (NM_007705) promoter-TSS (NM_007705) -532 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-2 chr12 77972725 77973369 + 1.26025077975594 NA Intergenic Intergenic -253608 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-11 chr2 92013072 92013569 + 1.26025077975594 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 10850 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak2_30_13_0.870149597068422_4.24242972059182_1.26025077975594 chr3 10439529 10439794 + 1.26025077975594 NA intron (NM_001127191, intron 1 of 6) CpG 469 NM_029068 74718 Mm.440548 NM_029068 ENSMUSG00000027534 Snx16 4930522N22Rik|AI117577|AI747675 sorting nexin 16 protein-coding common_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594 chr12 40446249 40446496 + 1.26025077975594 NA promoter-TSS (NM_172575) promoter-TSS (NM_172575) 319 NM_172803 238130 Mm.341423 NM_172803 ENSMUSG00000035954 Dock4 5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716 dedicator of cytokinesis 4 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594 chr1 150251550 150251934 + 1.26025077975594 NA Intergenic Intergenic -67675 NM_024458 20028 Mm.440883 NM_024458 ENSMUSG00000006007 Pdc Rpr-1|Rpr1 phosducin protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-12 chr2 113358273 113358695 + 1.26025077975594 NA intron (NM_010230, intron 1 of 19) intron (NM_010230, intron 1 of 19) 30748 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-7 chr17 87672330 87673075 + 1.26025077975594 NA exon (NM_008628, exon 1 of 16) exon (NM_008628, exon 1 of 16) 145 NM_008628 17685 Mm.4619 NM_008628 ENSMUSG00000024151 Msh2 AI788990 mutS homolog 2 protein-coding unique_peak1_31_13_0.915630142586947_4.26516999335108_1.26025077975594-4 chr15 73535931 73536482 + 1.26025077975594 NA intron (NR_152151, intron 7 of 23) intron (NR_152151, intron 7 of 23) 23646 NM_001081066 105841 Mm.322557 NM_001081066 ENSMUSG00000036661 Dennd3 AI447457|E030003N15Rik DENN/MADD domain containing 3 protein-coding common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-4 chr16 38007839 38008133 + 1.26025077975594 NA TTS (NM_153394) TTS (NM_153394) -9337 NR_040565 75175 Mm.399335 NR_040565 4930542C21Rik - RIKEN cDNA 4930542C21 gene ncRNA common_peak1_30_13_0.870149597068422_4.24242972059182_1.26025077975594-4 chr5 140608615 140609002 + 1.26025077975594 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 1467 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-2 chr2 51278609 51278913 + 1.26025077975594 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 36930 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA common_peak2_15_26_-1.02484745794567_4.24246377319063_1.26025077975594-9 chr9 119340773 119341052 + 1.26025077975594 NA promoter-TSS (NM_130864) promoter-TSS (NM_130864) -382 NM_130864 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding common_peak2_109_64_0.46940950874924_6.25707256740307_1.25880250360973 chr12 76531180 76532403 + 1.25880250360973 NA Intergenic Intergenic 1421 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_109_64_0.46940950874924_6.25707256740307_1.25880250360973-2 chr3 32397151 32398066 + 1.25880250360973 NA Intergenic CpG -31943 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak2_77_90_-0.508475843089372_6.25355671865401_1.25880250360973-2 chr17 66843601 66844896 + 1.25880250360973 NA intron (NM_001357625, intron 15 of 32) intron (NM_001357625, intron 15 of 32) 129792 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA common_peak2_77_90_-0.508475843089372_6.25355671865401_1.25880250360973 chr10 16552246 16553199 + 1.25880250360973 NA Intergenic Intergenic 543060 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_152_94_0.39459147388717_6.76715134527453_1.25710776046866 chr15 83440081 83441499 + 1.25710776046866 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 7090 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_152_94_0.39459147388717_6.76715134527453_1.25710776046866-2 chr9 69453630 69454690 + 1.25710776046866 NA intron (NM_007585, intron 1 of 12) intron (NM_007585, intron 1 of 12) 477 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_114_125_-0.421824702523028_6.7663675722384_1.25710776046863-2 chr7 132734871 132736116 + 1.25710776046863 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 41423 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_114_125_-0.421824702523028_6.7663675722384_1.25710776046863 chr17 27027666 27028768 + 1.25710776046863 NA intron (NR_149749, intron 1 of 6) intron (NR_149749, intron 1 of 6) 410 NM_007523 12018 Mm.2443 NM_007523 ENSMUSG00000057789 Bak1 Bak|N-BAK1|N-Bak BCL2-antagonist/killer 1 protein-coding common_peak1_192_122_0.354637865130952_7.11983343790472_1.25697084315004 chr12 112593552 112595609 + 1.25697084315004 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 5796 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_87_49_0.528264233249091_5.90798830639927_1.25617732716373 chr2 128818297 128819175 + 1.25617732716373 NA intron (NM_001355629, intron 1 of 18) intron (NM_001355629, intron 1 of 18) 433 NM_001355629 72477 Mm.259688 NM_028248 ENSMUSG00000014353 Tmem87b 2610301K12Rik|2810431I02Rik|AU014804 transmembrane protein 87B protein-coding common_peak2_87_49_0.528264233249091_5.90798830639927_1.25617732716373 chr2 166995643 166996257 + 1.25617732716373 NA intron (NM_001109905, intron 1 of 11) CpG 349 NM_011490 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen double-stranded RNA binding protein 1 protein-coding common_peak1_87_49_0.528264233249091_5.90798830639927_1.25617732716373-3 chr8 3414380 3415677 + 1.25617732716373 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 22020 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_87_49_0.528264233249091_5.90798830639927_1.25617732716373-2 chr2 166995642 166996278 + 1.25617732716373 NA intron (NM_001109905, intron 1 of 11) CpG 339 NM_011490 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen double-stranded RNA binding protein 1 protein-coding common_peak2_73_40_0.566353756866114_5.64072888305114_1.25612039445446 chr13 51967991 51968635 + 1.25612039445446 NA Intergenic Intergenic 121638 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_73_40_0.566353756866114_5.64072888305114_1.25612039445446-4 chr7 111083298 111084105 + 1.25612039445446 NA promoter-TSS (NM_001040131) promoter-TSS (NM_001040131) -671 NM_013507 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak1_48_61_-0.62083816702082_5.64377722687646_1.25612039445446 chr1 135429696 135430404 + 1.25612039445446 NA intron (NM_001357578, intron 1 of 24) CpG 441 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding common_peak1_73_40_0.566353756866114_5.64072888305114_1.25612039445446-2 chr13 51967972 51968707 + 1.25612039445446 NA Intergenic Intergenic 121664 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_73_40_0.566353756866114_5.64072888305114_1.25612039445446-3 chr5 35040198 35041276 + 1.25612039445446 NA promoter-TSS (NM_019447) promoter-TSS (NM_019447) -772 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak2_48_61_-0.62083816702082_5.64377722687646_1.25612039445446 chr5 100040032 100040968 + 1.25612039445446 NA intron (NM_001163035, intron 1 of 6) intron (NM_001163035, intron 1 of 6) 506 NR_027990 67870 Mm.11311 NM_026421 ENSMUSG00000029326 Enoph1 2310057D15Rik|BB183658|C81437 enolase-phosphatase 1 protein-coding common_peak1_73_40_0.566353756866114_5.64072888305114_1.25612039445446-5 chr9 105053306 105054076 + 1.25612039445446 NA intron (NM_053159, intron 1 of 9) intron (NM_053159, intron 1 of 9) 423 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak1_48_61_-0.62083816702082_5.64377722687646_1.25612039445446-2 chr1 183297132 183297924 + 1.25612039445446 NA promoter-TSS (NM_027861) promoter-TSS (NM_027861) -235 NR_151660 71678 Mm.392270 NM_027861 ENSMUSG00000046836 Brox 0610010K06Rik BRO1 domain and CAAX motif containing protein-coding common_peak1_73_40_0.566353756866114_5.64072888305114_1.25612039445446 chr10 81495566 81496396 + 1.25612039445446 NA intron (NM_134009, intron 1 of 13) intron (NM_134009, intron 1 of 13) 382 NM_134009 103425 Mm.302791 NM_134009 ENSMUSG00000020238 Ncln 3100002P13Rik|AW120537 nicalin protein-coding common_peak2_209_212_-0.316627984599068_7.5763956279263_1.25592529893987 chr18 75493841 75494894 + 1.25592529893987 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -20278 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_71_84_-0.524734667038241_6.14702360261858_1.25499473419405 chr10 7956370 7957185 + 1.25499473419405 NA promoter-TSS (NM_138667) promoter-TSS (NM_138667) -654 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_71_84_-0.524734667038241_6.14702360261858_1.25499473419405 chr15 66868051 66868494 + 1.25499473419405 NA Intergenic Intergenic -23121 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_102_59_0.490696769449708_6.15223898033337_1.25499473419404 chr10 120635230 120636136 + 1.25499473419404 NA Intergenic Intergenic -130049 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_123_133_-0.402694630478234_6.86474187521866_1.25426534773139 chr7 101970687 101971698 + 1.25426534773139 NA intron (NM_133947, intron 1 of 24) intron (NM_133947, intron 1 of 24) 1349 NM_133947 101706 Mm.27259 NM_133947 ENSMUSG00000066306 Numa1 6720401E04Rik|AA764025|AL022610|AU014979|NuMA nuclear mitotic apparatus protein 1 protein-coding common_peak2_122_133_-0.414294020629879_6.85894218014283_1.25426534773139 chr1 152766661 152767476 + 1.25426534773139 NA promoter-TSS (NM_001346119) promoter-TSS (NM_001346119) 526 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding common_peak1_38_51_-0.694065941458523_5.35340674741183_1.25391625579201-2 chr9 96752940 96753261 + 1.25391625579201 NA promoter-TSS (NR_015511) promoter-TSS (NR_015511) -269 NR_015511 319859 Mm.259909 NM_177020 E030011O05Rik - RIKEN cDNA E030011O05 gene ncRNA common_peak1_61_32_0.626055420194328_5.35742182945562_1.25391625579201-2 chr13 36531545 36532038 + 1.25391625579201 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 202686 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak2_38_51_-0.694065941458523_5.35340674741183_1.25391625579201-2 chr2 27802848 27803631 + 1.25391625579201 NA Intergenic Intergenic -83186 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_61_32_0.626055420194328_5.35742182945562_1.25391625579201-3 chr5 39643901 39644627 + 1.25391625579201 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 367 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak1_61_32_0.626055420194328_5.35742182945562_1.25391625579201 chr12 100159278 100159997 + 1.25391625579201 NA promoter-TSS (NM_183155) promoter-TSS (NM_183155) 16 NM_001290303 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding common_peak2_38_51_-0.694065941458523_5.35340674741183_1.25391625579201 chr11 116490112 116490575 + 1.25391625579201 NA promoter-TSS (NM_026364) promoter-TSS (NM_026364) 3 NM_026364 67763 Mm.25125 NM_026364 ENSMUSG00000015869 Prpsap1 5730409F23Rik|PAP39 phosphoribosyl pyrophosphate synthetase-associated protein 1 protein-coding common_peak2_38_51_-0.694065941458523_5.35340674741183_1.25391625579201-3 chr2 163813927 163814936 + 1.25391625579201 NA Intergenic Intergenic -6403 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak2_61_32_0.626055420194328_5.35742182945562_1.25391625579201 chr6 48593999 48594591 + 1.25391625579201 NA intron (NM_001079905, intron 1 of 1) CpG 412 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_38_51_-0.694065941458523_5.35340674741183_1.25391625579201 chr8 79711936 79712419 + 1.25391625579201 NA promoter-TSS (NM_015751) promoter-TSS (NM_015751) 328 NM_001357236 68999 Mm.257445 NM_026904 ENSMUSG00000036977 Anapc10 1500026N15Rik|A830003M23Rik|APC10 anaphase promoting complex subunit 10 protein-coding common_peak2_94_54_0.500405660201121_6.03156254362522_1.25387254443511 chr17 27819868 27820467 + 1.25387254443511 NA intron (NM_001033279, intron 1 of 4) CpG 375 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_65_78_-0.543769743352589_6.03189587650081_1.25387254443511 chr5 104046308 104047543 + 1.25387254443511 NA promoter-TSS (NM_028794) promoter-TSS (NM_028794) 61 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding common_peak1_94_54_0.500405660201121_6.03156254362522_1.25387254443511 chr8 46868087 46869327 + 1.25387254443511 NA Intergenic Intergenic -118180 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_107_118_-0.429325891981029_6.68015481731743_1.25311371773615 chr17 17373724 17375057 + 1.25311371773615 NA promoter-TSS (NM_025934) promoter-TSS (NM_025934) 58 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 protein-coding common_peak1_107_118_-0.429325891981029_6.68015481731743_1.25311371773615 chr13 54621822 54622795 + 1.25311371773615 NA intron (NM_178397, intron 1 of 10) intron (NM_178397, intron 1 of 10) 524 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding common_peak1_118_70_0.454687807832656_6.37709102342101_1.25310961472615 chr12 3426981 3428110 + 1.25310961472615 NA promoter-TSS (NR_030694) promoter-TSS (NR_030694) 688 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2, transcriptional regulator protein-coding common_peak2_85_97_-0.47552229347902_6.3769486973757_1.25310961472615 chr19 9079213 9080289 + 1.25310961472615 NA Intergenic Intergenic 8205 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_168_175_-0.352505273091355_7.28317898209162_1.25301342992399 chr8 8659722 8661189 + 1.25301342992399 NA intron (NM_010111, intron 1 of 4) CpG 318 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_43_56_-0.653714611567681_5.5060327083809_1.25272902092874-2 chr5 88565169 88565875 + 1.25272902092874 NA intron (NM_001289774, intron 1 of 17) CpG 482 NM_001289775 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding common_peak1_43_56_-0.653714611567681_5.5060327083809_1.25272902092874 chr4 89123154 89123813 + 1.25272902092874 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 4743 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak2_43_56_-0.653714611567681_5.5060327083809_1.25272902092874 chr17 31854936 31855774 + 1.25272902092874 NA intron (NM_010831, intron 1 of 13) CpG-6228 449 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak1_67_36_0.593322512134257_5.50611462169608_1.25272902092873 chr2 152804428 152805426 + 1.25272902092873 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 23562 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_67_36_0.593322512134257_5.50611462169608_1.25272902092873 chr8 35920790 35921412 + 1.25272902092873 NA Intergenic Intergenic -38144 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_67_36_0.593322512134257_5.50611462169608_1.25272902092873 chr10 80676708 80677172 + 1.25272902092873 NA promoter-TSS (NM_021462) promoter-TSS (NM_021462) -647 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_273_181_0.29136595434384_7.65347761737062_1.25088325029008 chr3 104788716 104790802 + 1.25088325029008 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 725 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak1_126_76_0.430853080879015_6.48221308113441_1.25067859699876 chr7 44891651 44892753 + 1.25067859699876 NA 5' UTR (NM_001331208, exon 1 of 16) 5' UTR (NM_001331208, exon 1 of 16) 222 NM_001331208 75613 Mm.157778 NM_029365 ENSMUSG00000002968 Med25 2610034E13Rik|2610529E18Rik|ESTM2 mediator complex subunit 25 protein-coding common_peak1_92_104_-0.462960375885886_6.48276532972318_1.25067859699873 chr8 64849277 64850516 + 1.25067859699873 NA promoter-TSS (NM_178633) promoter-TSS (NM_178633) 28 NM_178633 77113 Mm.350347 NM_178633 ENSMUSG00000031605 Klhl2 6030411N21Rik|8530402H02Rik|ABP-KELCH|AU020744|Mav kelch-like 2, Mayven protein-coding common_peak1_92_104_-0.462960375885886_6.48276532972318_1.25067859699873-2 chr9 110681161 110682516 + 1.25067859699873 NA intron (NM_028312, intron 1 of 6) B1_Mus2|SINE|Alu 25335 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_238_155_0.317984097688045_7.44439426770627_1.24937329649872 chr6 142345693 142348089 + 1.24937329649872 NA intron (NM_183165, intron 1 of 11) intron (NM_183165, intron 1 of 11) 1194 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_115_126_-0.420826644968144_6.77827136428809_1.24839774024781 chr8 106058658 106059441 + 1.24839774024781 NA promoter-TSS (NM_010901) promoter-TSS (NM_010901) -554 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813 chr14 54516567 54517328 + 1.24799833770813 NA intron (NM_013768, intron 1 of 16) intron (NM_013768, intron 1 of 16) 523 NM_001313906 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding common_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813-4 chr2 113449336 113449946 + 1.24799833770813 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 8577 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_50_25_0.690226741422815_5.0455530888525_1.24799833770813 chr18 60620798 60621335 + 1.24799833770813 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 3239 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813-3 chr2 30444721 30445367 + 1.24799833770813 NA intron (NM_138748, intron 9 of 9) intron (NM_138748, intron 9 of 9) 28994 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak2_29_42_-0.795732209502969_5.02839864995061_1.24799833770813 chr1 151427658 151428371 + 1.24799833770813 NA promoter-TSS (NM_001357569) promoter-TSS (NM_001357569) 421 NM_025819 66875 Mm.290905 NM_025819 ENSMUSG00000052748 Swt1 1200016B10Rik|C1orf26 SWT1 RNA endoribonuclease homolog (S. cerevisiae) protein-coding common_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813-6 chr9 83833942 83834597 + 1.24799833770813 NA promoter-TSS (NM_009445) promoter-TSS (NM_009445) -420 NM_009445 22137 Mm.1904 NM_009445 ENSMUSG00000038379 Ttk AL022661|Esk1|Mps1|PYT|esk Ttk protein kinase protein-coding common_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813-5 chr8 119424084 119424575 + 1.24799833770813 NA Intergenic Intergenic -12833 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_50_25_0.690226741422815_5.0455530888525_1.24799833770813-2 chr4 155177875 155178355 + 1.24799833770813 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 44420 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_29_42_-0.795732209502969_5.02839864995061_1.24799833770813-2 chr11 101232034 101232529 + 1.24799833770813 NA Intergenic Intergenic -5818 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding common_peak2_29_42_-0.795732209502969_5.02839864995061_1.24799833770813-3 chr15 79328462 79329152 + 1.24799833770813 NA promoter-TSS (NM_001199024) promoter-TSS (NM_001199024) -436 NM_001199023 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_29_42_-0.795732209502969_5.02839864995061_1.24799833770813 chr18 37879765 37880166 + 1.24799833770813 NA intron (NM_007858, intron 16 of 26) intron (NM_007858, intron 16 of 26) -25305 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA common_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813-2 chr14 76789334 76790162 + 1.24799833770813 NA Intergenic Intergenic 29617 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_29_42_-0.795732209502969_5.02839864995061_1.24799833770813-4 chr16 45969363 45970065 + 1.24799833770813 NA non-coding (NR_152226, exon 3 of 3) non-coding (NR_152226, exon 3 of 3) 24108 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA unique_peak1_50_25_0.690226741422815_5.0455530888525_1.24799833770813 chr19 40436819 40437481 + 1.24799833770813 NA intron (NM_001034962, intron 1 of 22) intron (NM_001034962, intron 1 of 22) 14248 NM_001034962 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_322_312_-0.255174538415304_8.16243157772497_1.24799292987983 chr17 5840199 5843355 + 1.24799292987983 NA intron (NM_025664, intron 1 of 17) CpG 397 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak1_327_220_0.268947049062518_7.92237608392269_1.24788615163356 chr8 105544764 105547585 + 1.24788615163356 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 19890 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak1_160_167_-0.354860050981621_7.21488739728795_1.24771242135777 chr15 59679755 59681211 + 1.24771242135777 NA Intergenic Intergenic 31829 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_215_139_0.329153874808704_7.29385995434932_1.24694095670345 chr9 108490637 108491925 + 1.24694095670345 NA TTS (NM_008483) TTS (NM_008483) 605 NM_001168373 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak2_78_91_-0.505994289781737_6.27056481116614_1.24640685895414 chr2 37442613 37443798 + 1.24640685895414 NA promoter-TSS (NM_146121) promoter-TSS (NM_146121) -80 NM_146121 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak1_110_65_0.4603472443532_6.27456774153505_1.24640685895412 chr5 112291532 112292818 + 1.24640685895412 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 15484 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_350_337_-0.246944414291194_8.27740722913659_1.24612971703771 chr1 88697779 88702653 + 1.24612971703771 NA 3' UTR (NM_177305, exon 1 of 1) 3' UTR (NM_177305, exon 1 of 1) 1975 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak2_132_142_-0.396103812232356_6.96181943066221_1.24588799350468-2 chr18 82691631 82693384 + 1.24588799350468 NA intron (NM_177832, intron 1 of 29) intron (NM_177832, intron 1 of 29) 227 NM_177832 329002 Mm.34438 NM_177832 ENSMUSG00000041258 Zfp236 AI447957|Gm335 zinc finger protein 236 protein-coding common_peak2_132_142_-0.396103812232356_6.96181943066221_1.24588799350468 chr15 68258132 68259383 + 1.24588799350468 NA promoter-TSS (NM_001145888) promoter-TSS (NM_001145888) 99 NR_152182 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding common_peak2_54_67_-0.5886305398994_5.79314757130064_1.2455458718154-4 chr14 14703063 14703793 + 1.2455458718154 NA intron (NM_001360513, intron 1 of 25) CpG 403 NM_001360509 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak2_54_67_-0.5886305398994_5.79314757130064_1.2455458718154-6 chr6 85295264 85295886 + 1.2455458718154 NA intron (NM_178639, intron 3 of 13) intron (NM_178639, intron 3 of 13) 37847 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding common_peak2_54_67_-0.5886305398994_5.79314757130064_1.2455458718154-2 chr11 101552113 101552580 + 1.2455458718154 NA promoter-TSS (NM_001252223) promoter-TSS (NM_001252223) 239 NM_001252220 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak2_54_67_-0.5886305398994_5.79314757130064_1.2455458718154 chr11 20955255 20956456 + 1.2455458718154 NA Intergenic Intergenic -124747 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_54_67_-0.5886305398994_5.79314757130064_1.2455458718154-5 chr5 89276938 89277644 + 1.2455458718154 NA Intergenic Intergenic 180607 NM_008096 14473 Mm.196595 NM_008096 ENSMUSG00000035540 Gc DBP|VDB vitamin D binding protein protein-coding common_peak2_54_67_-0.5886305398994_5.79314757130064_1.2455458718154-3 chr12 79540945 79541630 + 1.2455458718154 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 243936 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_54_67_-0.5886305398994_5.79314757130064_1.2455458718154-2 chr11 101552122 101552557 + 1.2455458718154 NA promoter-TSS (NM_001252223) promoter-TSS (NM_001252223) 232 NM_001252220 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak1_54_67_-0.5886305398994_5.79314757130064_1.2455458718154 chr1 193413173 193414031 + 1.2455458718154 NA Intergenic Intergenic -43320 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_81_45_0.547397611543425_5.79726076182873_1.24554587181539-4 chr8 46948380 46948805 + 1.24554587181539 NA Intergenic Intergenic -38295 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_81_45_0.547397611543425_5.79726076182873_1.24554587181539-2 chr3 66292586 66293201 + 1.24554587181539 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 3944 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding common_peak1_81_45_0.547397611543425_5.79726076182873_1.24554587181539 chr16 90830166 90831219 + 1.24554587181539 NA promoter-TSS (NR_133572) promoter-TSS (NR_133572) -167 NR_133572 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding common_peak1_81_45_0.547397611543425_5.79726076182873_1.24554587181539-3 chr3 122921120 122921889 + 1.24554587181539 NA intron (NR_046036, intron 1 of 5) intron (NR_046036, intron 1 of 5) 2612 NR_046036 74057 Mm.159123 NR_046036 ENSMUSG00000097852 4933405D12Rik - RIKEN cDNA 4933405D12 gene ncRNA common_peak2_81_45_0.547397611543425_5.79726076182873_1.24554587181539 chr3 66292586 66293213 + 1.24554587181539 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 3938 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding common_peak2_323_313_-0.255348254910503_8.16694662143638_1.24469655119167 chr4 128726817 128730745 + 1.24469655119167 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 1210 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic 2 protein-coding common_peak1_194_124_0.346136431627872_7.13885250047602_1.24338924226548 chr12 35046394 35048194 + 1.24338924226548 NA 5' UTR (NM_001014973, exon 1 of 26) 5' UTR (NM_001014973, exon 1 of 26) 105 NM_001014973 217463 Mm.213991 NM_001014973 ENSMUSG00000020590 Snx13 Rgs-px1|mKIAA0713 sorting nexin 13 protein-coding common_peak1_119_71_0.446497584610329_6.39317379374748_1.24174436008482-2 chr13 95617190 95618256 + 1.24174436008482 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 743 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_119_71_0.446497584610329_6.39317379374748_1.24174436008482-3 chr3 9522879 9524554 + 1.24174436008482 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 86369 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak1_119_71_0.446497584610329_6.39317379374748_1.24174436008482 chr11 62076965 62078582 + 1.24174436008482 NA intron (NM_001029936, intron 1 of 12) intron (NM_001029936, intron 1 of 12) 749 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_103_60_0.480690877745737_6.17108277643575_1.24170275160342 chr16 32914119 32915201 + 1.24170275160342 NA intron (NM_001081255, intron 1 of 20) CpG 560 NM_001310672 70144 Mm.491178 NM_001081255 ENSMUSG00000022801 Lrch3 2210409B11Rik|AW215594|Gm1742 leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding common_peak2_103_60_0.480690877745737_6.17108277643575_1.24170275160342 chr18 73571604 73572349 + 1.24170275160342 NA promoter-TSS (NM_001039214) promoter-TSS (NM_001039214) -729 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak1_103_60_0.480690877745737_6.17108277643575_1.24170275160342-2 chr4 126677689 126678235 + 1.24170275160342 NA intron (NM_011970, intron 1 of 5) intron (NM_011970, intron 1 of 5) 319 NM_011970 26445 Mm.22233 NM_011970 ENSMUSG00000028837 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e|HC7-I proteasome (prosome, macropain) subunit, beta type 2 protein-coding common_peak1_103_60_0.480690877745737_6.17108277643575_1.24170275160342-4 chr7 70359747 70361068 + 1.24170275160342 NA 5' UTR (NM_009697, exon 1 of 3) 5' UTR (NM_009697, exon 1 of 3) 186 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak1_103_60_0.480690877745737_6.17108277643575_1.24170275160342-3 chr7 24398958 24400313 + 1.24170275160342 NA promoter-TSS (NM_028047) promoter-TSS (NM_028047) 7 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-6 chr7 109155360 109155841 + 1.24110690293937 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 14912 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-2 chr11 69117924 69118617 + 1.24110690293937 NA Intergenic Intergenic -2183 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hes family bHLH transcription factor 7 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-7 chr4 114321279 114321822 + 1.24110690293937 NA Intergenic Intergenic -85174 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak2_18_30_-0.977977876268483_4.46520737225263_1.24110690293937 chr3 138095645 138096043 + 1.24110690293937 NA intron (NM_001355052, intron 19 of 21) intron (NM_001355052, intron 19 of 21) -28456 NR_037975 329763 Mm.169710 NM_177860 ENSMUSG00000049349 Gm5105 D830013H12|EG329763 predicted gene 5105 ncRNA unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-6 chr2 101792484 101793019 + 1.24110690293937 NA intron (NM_001355625, intron 1 of 8) intron (NM_001355625, intron 1 of 8) 4956 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937 chr10 80165304 80165772 + 1.24110690293937 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -2301 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak2_18_30_-0.977977876268483_4.46520737225263_1.24110690293937-2 chr4 149518351 149518740 + 1.24110690293937 NA intron (NM_023465, intron 1 of 4) CpG 304 NM_023465 67087 Mm.299735 NM_023465 ENSMUSG00000028988 Ctnnbip1 1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat catenin beta interacting protein 1 protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-5 chr12 119237827 119238461 + 1.24110690293937 NA 5' UTR (NM_177290, exon 1 of 14) 5' UTR (NM_177290, exon 1 of 14) 132 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding common_peak2_18_30_-0.977977876268483_4.46520737225263_1.24110690293937-3 chr2 31952900 31953608 + 1.24110690293937 NA intron (NM_145144, intron 2 of 5) (TG)n|Simple_repeat|Simple_repeat 2951 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-8 chr8 46083327 46083780 + 1.24110690293937 NA intron (NM_207213, intron 4 of 17) intron (NM_207213, intron 4 of 17) 40593 NM_207213 102141 Mm.267258 NM_207213 ENSMUSG00000038291 Snx25 AI661919|Gm1699|Gm173|Sbbi31 sorting nexin 25 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-5 chr18 84866679 84867233 + 1.24110690293937 NA intron (NM_001348159, intron 1 of 5) intron (NM_001348159, intron 1 of 5) 15618 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-4 chr14 54602827 54603345 + 1.24110690293937 NA intron (NM_028890, intron 1 of 6) intron (NM_028890, intron 1 of 6) 2822 NM_028890 74359 Mm.79815 NM_028890 ENSMUSG00000022179 4931414P19Rik Rtfc RIKEN cDNA 4931414P19 gene protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-7 chr7 113171978 113172831 + 1.24110690293937 NA Intergenic Intergenic -30389 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_35_16_0.804248407422365_4.48958704496152_1.24110690293937 chr13 34409334 34409620 + 1.24110690293937 NA Intergenic Intergenic -64295 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_18_30_-0.977977876268483_4.46520737225263_1.24110690293937-2 chr8 125920430 125920749 + 1.24110690293937 NA intron (NM_145608, intron 1 of 9) intron (NM_145608, intron 1 of 9) 10139 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding common_peak2_35_16_0.804248407422365_4.48958704496152_1.24110690293937-4 chr4 88412791 88413038 + 1.24110690293937 NA TTS (NM_025760) TTS (NM_025760) 26012 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding common_peak2_35_16_0.804248407422365_4.48958704496152_1.24110690293937-3 chr19 9072102 9072406 + 1.24110690293937 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 15702 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-3 chr11 116329302 116329750 + 1.24110690293937 NA Intergenic Intergenic 5828 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak2_18_30_-0.977977876268483_4.46520737225263_1.24110690293937 chr11 99077208 99077543 + 1.24110690293937 NA intron (NM_172564, intron 4 of 12) intron (NM_172564, intron 4 of 12) 11931 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding common_peak2_18_30_-0.977977876268483_4.46520737225263_1.24110690293937-2 chr15 64477818 64478223 + 1.24110690293937 NA Intergenic Intergenic -95101 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-2 chr10 89533844 89534270 + 1.24110690293937 NA promoter-TSS (NM_001163504) promoter-TSS (NM_001163504) -435 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-9 chr8 122375943 122376385 + 1.24110690293937 NA promoter-TSS (NM_001310650) promoter-TSS (NM_001310650) -445 NM_001310650 76014 Mm.241489 NM_001029993 ENSMUSG00000017478 Zc3h18 1190001B23Rik|5830416A07Rik|Nhn1 zinc finger CCCH-type containing 18 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-10 chr9 56872647 56873037 + 1.24110690293937 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 7738 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding common_peak1_18_30_-0.977977876268483_4.46520737225263_1.24110690293937 chr17 78882259 78882463 + 1.24110690293937 NA intron (NM_011163, intron 1 of 15) intron (NM_011163, intron 1 of 15) 211 NM_011163 19106 Mm.378990 NM_011163 ENSMUSG00000024079 Eif2ak2 2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-8 chr5 113207148 113207502 + 1.24110690293937 NA Intergenic Intergenic -19584 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-3 chr13 91801610 91802211 + 1.24110690293937 NA intron (NM_145453, intron 2 of 5) intron (NM_145453, intron 2 of 5) 5786 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak2_35_16_0.804248407422365_4.48958704496152_1.24110690293937-2 chr17 46772940 46773142 + 1.24110690293937 NA TTS (NM_025433) TTS (NM_025433) 406 NM_025966 67101 Mm.358702 NM_025966 ENSMUSG00000062619 2310039H08Rik - RIKEN cDNA 2310039H08 gene protein-coding unique_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937 chr10 128704388 128704940 + 1.24110690293937 NA intron (NM_183417, intron 1 of 7) CpG 387 NM_183417 12566 Mm.111326 NM_016756 ENSMUSG00000025358 Cdk2 A630093N05Rik cyclin-dependent kinase 2 protein-coding common_peak1_35_16_0.804248407422365_4.48958704496152_1.24110690293937-4 chr12 100187802 100188215 + 1.24110690293937 NA promoter-TSS (NR_045282) promoter-TSS (NR_045282) 40 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 - predicted gene 10433 ncRNA common_peak2_100_112_-0.450681063157774_6.5948384308363_1.2410301407237-2 chr16 23436161 23437199 + 1.2410301407237 NA Intergenic Intergenic 7547 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_100_112_-0.450681063157774_6.5948384308363_1.2410301407237 chr15 35371097 35371756 + 1.2410301407237 NA promoter-TSS (NM_177151) promoter-TSS (NM_177151) -120 NM_177151 666173 Mm.309250 NM_177151 ENSMUSG00000037646 Vps13b 1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032 vacuolar protein sorting 13B protein-coding common_peak1_100_112_-0.450681063157774_6.5948384308363_1.2410301407237 chr10 108332255 108333467 + 1.2410301407237 NA exon (NM_054056, exon 2 of 7) exon (NM_054056, exon 2 of 7) 672 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-5 chr18 36449537 36449924 + 1.24082643394777 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 4765 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_27_11_0.946736593070769_4.05833079725654_1.24082643394777 chr14 121249525 121249796 + 1.24082643394777 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 954 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777 chr12 77039613 77039913 + 1.24082643394777 NA Intergenic Intergenic -77515 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-11 chr2 137110602 137111101 + 1.24082643394777 NA intron (NM_013822, intron 2 of 25) intron (NM_013822, intron 2 of 25) 5669 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-2 chr14 55717294 55717604 + 1.24082643394777 NA intron (NR_153435, intron 14 of 15) intron (NR_153435, intron 14 of 15) -3957 NM_001161715 21816 Mm.41964 NM_019984 ENSMUSG00000022218 Tgm1 2310004J08Rik|Tgase1 transglutaminase 1, K polypeptide protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-7 chr2 57157182 57157582 + 1.24082643394777 NA intron (NR_040356, intron 1 of 2) intron (NR_040356, intron 1 of 2) 24372 NR_040356 767815 Mm.188065 NR_040356 ENSMUSG00000084938 BB557941 - expressed sequence BB557941 ncRNA common_peak2_27_11_0.946736593070769_4.05833079725654_1.24082643394777-4 chr9 96196457 96196674 + 1.24082643394777 NA intron (NM_178667, intron 1 of 13) CpG 290 NM_001184708 211586 Mm.17977 NM_178667 ENSMUSG00000032411 Tfdp2 1110029I05Rik|A330080J22Rik|DP-3|DP3 transcription factor Dp 2 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-14 chr4 137082638 137082905 + 1.24082643394777 NA Intergenic Intergenic -34076 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-4 chr15 11841376 11841909 + 1.24082643394777 NA 3' UTR (NM_008728, exon 8 of 8) 3' UTR (NM_008728, exon 8 of 8) 64032 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-6 chrX 75764659 75764965 + 1.24082643394777 NA promoter-TSS (NR_029443) promoter-TSS (NR_029443) -113 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik|Dxz4 RIKEN cDNA 4933407K13 gene ncRNA unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-10 chr2 145284349 145284921 + 1.24082643394777 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 42024 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-12 chr2 173659166 173659429 + 1.24082643394777 NA promoter-TSS (NM_024436) promoter-TSS (NM_024436) 242 NR_027957 100043911 Mm.260590 NM_001033179 ENSMUSG00000055897 Ppp4r1l-ps 1700007P14Rik|5830403E09Rik|C030010B13Rik|Ppp4r1l protein phosphatase 4, regulatory subunit 1-like, pseudogene pseudo unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-5 chr15 97000680 97000916 + 1.24082643394777 NA intron (NM_027052, intron 13 of 15) intron (NM_027052, intron 13 of 15) 19561 NM_001358060 69354 Mm.250980 NM_027052 ENSMUSG00000022464 Slc38a4 1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3 solute carrier family 38, member 4 protein-coding common_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-2 chr14 46636860 46637120 + 1.24082643394777 NA intron (NR_046460, intron 1 of 4) intron (NR_046460, intron 1 of 4) 433 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-13 chr3 95726374 95726686 + 1.24082643394777 NA Intergenic B4A|SINE|B4 8443 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-4 chr17 31309894 31310179 + 1.24082643394777 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 13812 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-15 chrX 75514376 75514772 + 1.24082643394777 NA intron (NM_011692, intron 1 of 5) intron (NM_011692, intron 1 of 5) 277 NM_011692 22327 Mm.8294 NM_011692 ENSMUSG00000031197 Vbp1 VBP-1 von Hippel-Lindau binding protein 1 protein-coding common_peak1_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-2 chr3 101073015 101073204 + 1.24082643394777 NA exon (NM_011197, exon 4 of 9) exon (NM_011197, exon 4 of 9) 37057 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-3 chr3 144568864 144569177 + 1.24082643394777 NA intron (NM_001355234, intron 1 of 6) intron (NM_001355234, intron 1 of 6) 1196 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-11 chr4 140538037 140538282 + 1.24082643394777 NA intron (NM_001112723, intron 23 of 26) intron (NM_001112723, intron 23 of 26) 110597 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-6 chr17 73639941 73640489 + 1.24082643394777 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 70236 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_12_23_-1.1523693466928_4.00877782737476_1.24082643394777 chr19 8785984 8786196 + 1.24082643394777 NA intron (NM_001177798, intron 1 of 11) intron (NM_001177798, intron 1 of 11) 226 NM_146092 225895 Mm.220886 NM_146092 ENSMUSG00000003680 Taf6l 2810417N14Rik|BB223262|C530024J06Rik|Paf65a TATA-box binding protein associated factor 6 like protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-15 chr5 3323231 3323793 + 1.24082643394777 NA Intergenic Intergenic -20381 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-9 chr2 18677762 18678078 + 1.24082643394777 NA intron (NM_007552, intron 1 of 9) intron (NM_007552, intron 1 of 9) 902 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding common_peak2_27_11_0.946736593070769_4.05833079725654_1.24082643394777-2 chr2 152606401 152606625 + 1.24082643394777 NA intron (NM_001037247, intron 1 of 1) intron (NM_001037247, intron 1 of 1) 2186 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-20 chr8 128273448 128273757 + 1.24082643394777 NA Intergenic Intergenic 4623 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-18 chr7 130965975 130966335 + 1.24082643394777 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 29952 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-14 chr8 61585870 61586205 + 1.24082643394777 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 5132 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-4 chr5 64174793 64175122 + 1.24082643394777 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) 14697 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-12 chr6 91586150 91586596 + 1.24082643394777 NA Intergenic LTR48|LTR|ERV1 70338 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-6 chr19 32759553 32759939 + 1.24082643394777 NA intron (NM_008960, intron 1 of 8) intron (NM_008960, intron 1 of 8) 2169 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-2 chr10 39521558 39521888 + 1.24082643394777 NA intron (NM_001122893, intron 5 of 13) intron (NM_001122893, intron 5 of 13) -91211 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-2 chr2 164805230 164805615 + 1.24082643394777 NA promoter-TSS (NM_133240) promoter-TSS (NM_133240) 308 NM_178375 67538 Mm.33184 NM_178375 ENSMUSG00000045822 Zswim3 4921517A06Rik|C86566 zinc finger SWIM-type containing 3 protein-coding common_peak2_27_11_0.946736593070769_4.05833079725654_1.24082643394777-3 chr4 155840721 155841010 + 1.24082643394777 NA intron (NM_024263, intron 2 of 9) intron (NM_024263, intron 2 of 9) 1185 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-3 chr13 45469981 45470370 + 1.24082643394777 NA Intergenic Intergenic -37269 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-9 chr2 60720483 60720929 + 1.24082643394777 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 1897 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-4 chr9 58453312 58453622 + 1.24082643394777 NA Intergenic Intergenic -1706 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-10 chr2 117456757 117457161 + 1.24082643394777 NA Intergenic Intergenic -114082 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-17 chr7 83988824 83989224 + 1.24082643394777 NA intron (NM_030728, intron 7 of 28) intron (NM_030728, intron 7 of 28) 97024 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesd 2210015O11Rik|AW537813|Mesdc2|mKIAA0081|mesd|msd mesoderm development LRP chaperone protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-7 chr19 28184051 28184300 + 1.24082643394777 NA Intergenic Intergenic -173009 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-3 chr5 13399223 13399505 + 1.24082643394777 NA promoter-TSS (NM_009152) promoter-TSS (NM_009152) 55 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777 chr11 100526538 100526975 + 1.24082643394777 NA intron (NM_134037, intron 1 of 27) intron (NM_134037, intron 1 of 27) 1244 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-13 chr8 10866460 10866743 + 1.24082643394777 NA Intergenic Intergenic 15853 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-3 chr15 66871363 66871691 + 1.24082643394777 NA Intergenic Intergenic -19866 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777 chr1 131241988 131242360 + 1.24082643394777 NA intron (NM_018750, intron 1 of 5) intron (NM_018750, intron 1 of 5) 3004 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777 chr1 90051948 90052432 + 1.24082643394777 NA intron (NM_029122, intron 16 of 18) intron (NM_029122, intron 16 of 18) -37524 NM_139152 208372 Mm.215164 NM_139152 ENSMUSG00000067081 Asb18 Asb-18 ankyrin repeat and SOCS box-containing 18 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-19 chr8 106376445 106376961 + 1.24082643394777 NA Intergenic Intergenic -38636 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-8 chr2 60710363 60710915 + 1.24082643394777 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 11964 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-8 chr2 18028542 18029104 + 1.24082643394777 NA non-coding (NR_028378, exon 1 of 1) non-coding (NR_028378, exon 1 of 1) 1574 NR_028378 100034739 Mm.401643 NR_028378 Gm17762 - predicted gene, 17762 ncRNA unique_peak1_27_11_0.946736593070769_4.05833079725654_1.24082643394777-16 chr7 49209257 49209631 + 1.24082643394777 NA intron (NM_001111016, intron 2 of 38) MIRb|SINE|MIR -36745 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_12_23_-1.1523693466928_4.00877782737476_1.24082643394777-5 chr5 143528289 143528621 + 1.24082643394777 NA promoter-TSS (NM_009007) promoter-TSS (NM_009007) -424 NM_001347530 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding common_peak2_88_50_0.515881884428432_5.93036628418571_1.24045976088195 chr3 57304927 57305986 + 1.24045976088195 NA Intergenic Intergenic -3468 NM_001355130 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_60_73_-0.562297296326074_5.92830471746591_1.24045976088194-2 chr6 71830644 71831689 + 1.24045976088194 NA promoter-TSS (NM_001253681) promoter-TSS (NM_001253681) -154 NM_001362134 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding common_peak2_60_73_-0.562297296326074_5.92830471746591_1.24045976088194 chr2 137716253 137717141 + 1.24045976088194 NA Intergenic Intergenic -539887 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_128_77_0.434620934001394_6.50271268586295_1.24015883384958 chr15 38299318 38300513 + 1.24015883384958 NA promoter-TSS (NM_001357677) promoter-TSS (NM_001357677) -15 NM_001357677 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak1_155_96_0.392350975348952_6.7960883298616_1.239845502197 chr13 103773459 103774989 + 1.239845502197 NA intron (NM_001361085, intron 1 of 11) CpG 384 NM_001361085 218543 Mm.458176 NM_172592 ENSMUSG00000032621 Srek1 8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12 splicing regulatory glutamine/lysine-rich protein 1 protein-coding common_peak2_117_127_-0.407653894250565_6.79617305287472_1.239845502197 chr18 67723399 67724617 + 1.239845502197 NA intron (NM_008977, intron 1 of 9) CpG 613 NM_001127177 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak2_66_79_-0.540375077246975_6.05174055626387_1.23949456788155 chr11 53770051 53771453 + 1.23949456788155 NA intron (NM_001159396, intron 1 of 9) intron (NM_001159396, intron 1 of 9) 279 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_96_55_0.504255632353474_6.05948273823434_1.23949456788155 chr5 5685630 5686386 + 1.23949456788155 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 8081 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_95_55_0.489410765241159_6.05206030467818_1.23949456788155-2 chr12 91590251 91590854 + 1.23949456788155 NA promoter-TSS (NM_031391) promoter-TSS (NM_031391) -65 NM_175335 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak1_95_55_0.489410765241159_6.05206030467818_1.23949456788155 chr11 51918127 51919388 + 1.23949456788155 NA Intergenic Intergenic -48874 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_66_79_-0.540375077246975_6.05174055626387_1.23949456788155 chr16 13902131 13903014 + 1.23949456788155 NA promoter-TSS (NM_001289562) promoter-TSS (NM_001289562) 573 NM_001039533 94184 Mm.171484 NM_053181 ENSMUSG00000022680 Pdxdc1 2210010A19Rik|AA415817|Kiaa0251-hp pyridoxal-dependent decarboxylase domain containing 1 protein-coding common_peak1_26_38_-0.805800388388846_4.88250202466783_1.23883036201157-2 chr16 4003295 4003712 + 1.23883036201157 NA Intergenic Intergenic -1825 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak2_26_38_-0.805800388388846_4.88250202466783_1.23883036201157-2 chr4 126128774 126129406 + 1.23883036201157 NA intron (NM_028800, intron 5 of 10) intron (NM_028800, intron 5 of 10) -18913 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak1_26_38_-0.805800388388846_4.88250202466783_1.23883036201157-3 chr2 135658925 135659368 + 1.23883036201157 NA promoter-TSS (NM_013829) promoter-TSS (NM_013829) -401 NM_001355155 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-8 chr8 109751754 109752377 + 1.23883036201157 NA Intergenic Intergenic -14326 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-5 chr3 119895508 119896088 + 1.23883036201157 NA Intergenic Intergenic -112410 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-7 chr8 13286971 13287733 + 1.23883036201157 NA promoter-TSS (NM_172282) promoter-TSS (NM_172282) -661 NM_172282 234076 Mm.219813 NM_172282 ENSMUSG00000038497 Tmco3 B230339H12Rik|C87304 transmembrane and coiled-coil domains 3 protein-coding common_peak2_26_38_-0.805800388388846_4.88250202466783_1.23883036201157-3 chr8 83593898 83594414 + 1.23883036201157 NA intron (NM_134118, intron 1 of 12) intron (NM_134118, intron 1 of 12) 335 NM_027179 106529 Mm.352239 NM_027179 ENSMUSG00000031708 Tecr 2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2 trans-2,3-enoyl-CoA reductase protein-coding common_peak2_26_38_-0.805800388388846_4.88250202466783_1.23883036201157 chr17 21450174 21450699 + 1.23883036201157 NA promoter-TSS (NM_001308323) promoter-TSS (NM_001308323) 62 NM_009558 22709 Mm.293030 NM_009558 ENSMUSG00000023892 Zfp51 Zfp-51|zfec12 zinc finger protein 51 protein-coding unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-3 chr19 5837660 5838333 + 1.23883036201157 NA non-coding (NR_131212, exon 1 of 1) non-coding (NR_131212, exon 1 of 1) 7482 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_45_22_0.719291345739242_4.88320762892663_1.23883036201157-2 chr9 47406658 47407142 + 1.23883036201157 NA Intergenic Intergenic -123270 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-2 chr15 93710108 93710573 + 1.23883036201157 NA Intergenic Intergenic -114449 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding common_peak2_45_22_0.719291345739242_4.88320762892663_1.23883036201157 chr12 76509514 76509938 + 1.23883036201157 NA Intergenic Intergenic 23486 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak1_26_38_-0.805800388388846_4.88250202466783_1.23883036201157 chr13 23760571 23760871 + 1.23883036201157 NA TTS (NM_178192) TTS (NM_178192) 528 NM_178192 326619 Mm.228709 NM_178192 ENSMUSG00000060093 Hist1h4a - histone cluster 1, H4a protein-coding common_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-4 chr7 139252990 139253453 + 1.23883036201157 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 4739 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157 chr1 143777334 143778031 + 1.23883036201157 NA promoter-TSS (NM_013835) promoter-TSS (NM_013835) 404 NM_019562 56207 Mm.261004 NM_019562 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 protein-coding common_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-3 chr7 112185527 112186273 + 1.23883036201157 NA Intergenic Intergenic -26418 NM_001360257 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak2_26_38_-0.805800388388846_4.88250202466783_1.23883036201157 chr13 52765832 52766719 + 1.23883036201157 NA Intergenic Intergenic -9070 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-4 chr2 30711519 30712034 + 1.23883036201157 NA Intergenic CpG -9434 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-6 chr6 114940054 114941062 + 1.23883036201157 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -18737 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157 chr1 91098151 91098917 + 1.23883036201157 NA intron (NM_008515, intron 10 of 22) intron (NM_008515, intron 10 of 22) 45090 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_45_22_0.719291345739242_4.88320762892663_1.23883036201157-2 chr14 122904343 122905000 + 1.23883036201157 NA intron (NM_145466, intron 1 of 2) tRNA-Ala-GCA|tRNA|tRNA -8359 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA common_peak2_164_103_0.372173205864058_6.88652632107312_1.23814607570018 chr16 8830220 8831164 + 1.23814607570018 NA intron (NM_001081400, intron 1 of 3) CpG 592 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_164_103_0.372173205864058_6.88652632107312_1.23814607570018-2 chr19 5742060 5742841 + 1.23814607570018 NA exon (NM_008520, exon 2 of 28) exon (NM_008520, exon 2 of 28) 1546 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak1_165_103_0.380828923176582_6.89085417972938_1.23814607570018 chr2 173265031 173266438 + 1.23814607570018 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 10799 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_164_103_0.372173205864058_6.88652632107312_1.23814607570018 chr7 3692318 3694137 + 1.23814607570018 NA promoter-TSS (NM_001164205) promoter-TSS (NM_001164205) 298 NM_029934 77582 Mm.397541 NM_029934 ENSMUSG00000035596 Mboat7 5730589L02Rik|BB1|Leng4|Lpiat|Lpiat1|mBB1 membrane bound O-acyltransferase domain containing 7 protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219-5 chr19 53557020 53557847 + 1.23730827882219 NA Intergenic Intergenic 28115 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219-2 chr10 128337045 128338120 + 1.23730827882219 NA promoter-TSS (NM_026444) promoter-TSS (NM_026444) -145 NM_026444 12974 Mm.58836 NM_026444 ENSMUSG00000005683 Cs 2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis citrate synthase protein-coding common_peak1_74_41_0.550817041601002_5.66772594357926_1.23730827882219-3 chr17 84196558 84197419 + 1.23730827882219 NA intron (NM_183021, intron 36 of 37) intron (NM_183021, intron 36 of 37) -9041 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_74_41_0.550817041601002_5.66772594357926_1.23730827882219-2 chr13 85431227 85432318 + 1.23730827882219 NA Intergenic Intergenic -142286 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_75_41_0.569791052193142_5.67721294887533_1.23730827882219-2 chr14 29978399 29979259 + 1.23730827882219 NA intron (NM_027493, intron 1 of 12) intron (NM_027493, intron 1 of 12) 492 NM_027493 56249 Mm.215110 NM_027493 ENSMUSG00000015971 Actr8 5730542K05Rik|ARP8 ARP8 actin-related protein 8 protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219-7 chr5 105700012 105700768 + 1.23730827882219 NA promoter-TSS (NM_178701) promoter-TSS (NM_178701) -420 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_49_62_-0.614981061347608_5.66978939282611_1.23730827882219 chr5 125071759 125072566 + 1.23730827882219 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 68687 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219-3 chr13 108245547 108246653 + 1.23730827882219 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 31696 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak1_74_41_0.550817041601002_5.66772594357926_1.23730827882219 chr11 8628527 8629433 + 1.23730827882219 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 35555 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_75_41_0.569791052193142_5.67721294887533_1.23730827882219-3 chr8 24364169 24364739 + 1.23730827882219 NA Intergenic Intergenic 74492 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_74_41_0.550817041601002_5.66772594357926_1.23730827882219-2 chr8 70522568 70523096 + 1.23730827882219 NA intron (NM_029366, intron 1 of 4) CpG 348 NM_029366 75620 Mm.482129 NM_029366 ENSMUSG00000055553 Kxd1 0610030B01Rik|2810422J05Rik|C78305 KxDL motif containing 1 protein-coding common_peak1_74_41_0.550817041601002_5.66772594357926_1.23730827882219-5 chr4 84675223 84676038 + 1.23730827882219 NA promoter-TSS (NM_172870) promoter-TSS (NM_172870) -544 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_75_41_0.569791052193142_5.67721294887533_1.23730827882219-3 chr7 88467807 88468511 + 1.23730827882219 NA intron (NM_028238, intron 2 of 2) intron (NM_028238, intron 2 of 2) 37886 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219-6 chr3 122520806 122522055 + 1.23730827882219 NA intron (NM_013867, intron 8 of 11) intron (NM_013867, intron 8 of 11) 20251 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA common_peak1_75_41_0.569791052193142_5.67721294887533_1.23730827882219 chr11 70029079 70029922 + 1.23730827882219 NA intron (NM_007864, intron 2 of 19) intron (NM_007864, intron 2 of 19) 10895 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding common_peak2_75_41_0.569791052193142_5.67721294887533_1.23730827882219-2 chr19 56037138 56037689 + 1.23730827882219 NA Intergenic Intergenic 142092 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_74_41_0.550817041601002_5.66772594357926_1.23730827882219 chr17 86961860 86962294 + 1.23730827882219 NA Intergenic Intergenic -1034 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219 chr10 116296836 116297876 + 1.23730827882219 NA Intergenic Intergenic -4018 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_49_62_-0.614981061347608_5.66978939282611_1.23730827882219-4 chr17 28800755 28801640 + 1.23730827882219 NA promoter-TSS (NM_001081315) promoter-TSS (NM_001081315) 71 NM_001081315 268936 Mm.291877 NM_199061 ENSMUSG00000063952 Brpf3 AI413466|AW493400|mKIAA1286 bromodomain and PHD finger containing, 3 protein-coding common_peak1_74_41_0.550817041601002_5.66772594357926_1.23730827882219-4 chr19 56037184 56037610 + 1.23730827882219 NA Intergenic Intergenic 142076 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_75_41_0.569791052193142_5.67721294887533_1.23730827882219 chr12 28750015 28750420 + 1.23730827882219 NA 5' UTR (NM_178811, exon 1 of 12) 5' UTR (NM_178811, exon 1 of 12) 177 NM_001161410 217449 Mm.132006 NM_178811 ENSMUSG00000020628 Trappc12 CGI-87|D930014A20Rik|Ttc15 trafficking protein particle complex 12 protein-coding common_peak1_299_292_-0.265732349188973_8.06189067982776_1.23569064582136 chr11 53795022 53798371 + 1.23569064582136 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 26223 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_34_47_-0.733606508175352_5.21815924663348_1.23561791483487-5 chr4 117120655 117121218 + 1.23561791483487 NA intron (NR_024078, intron 6 of 6) CpG 4789 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak2_34_47_-0.733606508175352_5.21815924663348_1.23561791483487 chr1 57969652 57970016 + 1.23561791483487 NA promoter-TSS (NR_027630) promoter-TSS (NR_027630) 250 NM_001159864 51960 Mm.339711 NM_030211 ENSMUSG00000054770 Kctd18 4932411A20Rik|6530404F10Rik potassium channel tetramerisation domain containing 18 protein-coding common_peak2_34_47_-0.733606508175352_5.21815924663348_1.23561791483487-4 chr4 106859791 106860255 + 1.23561791483487 NA Intergenic Intergenic -51447 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487 chr1 105422770 105423405 + 1.23561791483487 NA Intergenic Intergenic -66377 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak2_56_29_0.643108461164083_5.22844482619056_1.23561791483487 chr3 95754402 95754881 + 1.23561791483487 NA intron (NM_001356965, intron 1 of 17) intron (NM_001356965, intron 1 of 17) 336 NR_151589 71807 Mm.271754 NM_027931 ENSMUSG00000028107 Tars2 2610024N01Rik|AI429208|Tarsl1|thrRS threonyl-tRNA synthetase 2, mitochondrial (putative) protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487-3 chr14 61556148 61556772 + 1.23561791483487 NA intron (NM_001310603, intron 1 of 3) CpG 426 NM_025697 66674 Mm.282706 NM_025697 ENSMUSG00000021930 Spryd7 6330409N04Rik|Clld6 SPRY domain containing 7 protein-coding common_peak2_56_29_0.643108461164083_5.22844482619056_1.23561791483487-2 chr5 91533120 91533847 + 1.23561791483487 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 15783 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_34_47_-0.733606508175352_5.21815924663348_1.23561791483487 chr3 14886289 14886783 + 1.23561791483487 NA 5' UTR (NM_009801, exon 1 of 7) 5' UTR (NM_009801, exon 1 of 7) 248 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_34_47_-0.733606508175352_5.21815924663348_1.23561791483487-3 chr15 11589558 11590263 + 1.23561791483487 NA Intergenic Intergenic -190252 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487-4 chr3 142620475 142620987 + 1.23561791483487 NA promoter-TSS (NM_010260) promoter-TSS (NM_010260) 68 NM_010260 14469 Mm.24038 NM_010260 ENSMUSG00000028270 Gbp2 - guanylate binding protein 2 protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487-5 chr4 138304920 138305502 + 1.23561791483487 NA exon (NM_007838, exon 2 of 11) exon (NM_007838, exon 2 of 11) 473 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487-2 chr11 51921291 51921872 + 1.23561791483487 NA Intergenic Intergenic -46050 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487-6 chr5 151184584 151185375 + 1.23561791483487 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 5214 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_34_47_-0.733606508175352_5.21815924663348_1.23561791483487-2 chr10 14704777 14705448 + 1.23561791483487 NA promoter-TSS (NR_045824) promoter-TSS (NR_045824) 377 NM_025418 66201 Mm.227983 NM_025418 ENSMUSG00000019868 Vta1 1110001D18Rik|1110059P08Rik|AU040813|C85340|LIP5|SBP1 vesicle (multivesicular body) trafficking 1 protein-coding common_peak1_56_29_0.643108461164083_5.22844482619056_1.23561791483487-7 chr8 12996102 12996689 + 1.23561791483487 NA intron (NM_001159486, intron 5 of 29) intron (NM_001159486, intron 5 of 29) -29639 NM_010172 14068 Mm.4827 NM_010172 ENSMUSG00000031443 F7 AI132620|Cf7|FVII coagulation factor VII protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358 chr1 189922038 189922633 + 1.23560027455358 NA promoter-TSS (NM_026796) promoter-TSS (NM_026796) -44 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-5 chr19 32322041 32322400 + 1.23560027455358 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 27096 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-2 chr13 119488062 119488404 + 1.23560027455358 NA promoter-TSS (NM_001177666) promoter-TSS (NM_001177666) 151 NR_027974 67304 Mm.474382 NM_026084 ENSMUSG00000074635 3110070M22Rik - RIKEN cDNA 3110070M22 gene ncRNA common_peak2_22_34_-0.879374735575468_4.68959564915723_1.23560027455358 chr12 86106401 86106771 + 1.23560027455358 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 24025 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_40_19_0.756086452286319_4.69997132103052_1.23560027455358-3 chr13 64003706 64004145 + 1.23560027455358 NA Intergenic Intergenic 85276 NM_008291 15487 Mm.5109 NM_008291 ENSMUSG00000033122 Hsd17b3 - hydroxysteroid (17-beta) dehydrogenase 3 protein-coding unique_peak2_22_34_-0.879374735575468_4.68959564915723_1.23560027455358 chr10 81649077 81649418 + 1.23560027455358 NA intron (NM_001142963, intron 1 of 3) CpG 178 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 - predicted gene 10778 protein-coding unique_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-6 chr8 67494841 67495257 + 1.23560027455358 NA 5' UTR (NM_010874, exon 1 of 2) 5' UTR (NM_010874, exon 1 of 2) 101 NM_010874 17961 Mm.4695 NM_010874 ENSMUSG00000051147 Nat2 AV377607 N-acetyltransferase 2 (arylamine N-acetyltransferase) protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-7 chr4 155848443 155849042 + 1.23560027455358 NA intron (NM_001356381, intron 1 of 15) intron (NM_001356381, intron 1 of 15) 1340 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-3 chr14 121878679 121879151 + 1.23560027455358 NA promoter-TSS (NR_131000) promoter-TSS (NR_131000) 309 NM_026861 68889 Mm.441151 NM_026861 ENSMUSG00000041765 Ubac2 1190008A14Rik|AW554959|Phgdhl1 ubiquitin associated domain containing 2 protein-coding unique_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358 chr10 59952186 59952682 + 1.23560027455358 NA promoter-TSS (NM_029083) promoter-TSS (NM_029083) -664 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-4 chr18 67800118 67800529 + 1.23560027455358 NA promoter-TSS (NR_045376) promoter-TSS (NR_045376) 216 NM_027556 70799 Mm.30857 NM_027556 ENSMUSG00000024542 Cep192 4631422C13Rik|D430014P18Rik centrosomal protein 192 protein-coding common_peak1_22_34_-0.879374735575468_4.68959564915723_1.23560027455358 chr4 124714956 124715322 + 1.23560027455358 NA intron (NM_029157, intron 1 of 16) CpG 278 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding unique_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-4 chr18 60600959 60601746 + 1.23560027455358 NA 3' UTR (NM_001109975, exon 2 of 2) 3' UTR (NM_001109975, exon 2 of 2) 8752 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_40_19_0.756086452286319_4.69997132103052_1.23560027455358-2 chr10 25789003 25789308 + 1.23560027455358 NA intron (NR_045349, intron 2 of 4) intron (NR_045349, intron 2 of 4) 48282 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA unique_peak2_22_34_-0.879374735575468_4.68959564915723_1.23560027455358-2 chr18 80152066 80152669 + 1.23560027455358 NA promoter-TSS (NM_175028) promoter-TSS (NM_175028) -885 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding unique_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-5 chr7 28419611 28419935 + 1.23560027455358 NA intron (NM_175021, intron 2 of 12) intron (NM_175021, intron 2 of 12) 16418 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-6 chr3 126598145 126598598 + 1.23560027455358 NA intron (NM_001025438, intron 1 of 18) intron (NM_001025438, intron 1 of 18) 1420 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_40_19_0.756086452286319_4.69997132103052_1.23560027455358 chr1 186445105 186445453 + 1.23560027455358 NA Intergenic Intergenic 113402 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_22_34_-0.879374735575468_4.68959564915723_1.23560027455358-2 chr6 146109960 146110526 + 1.23560027455358 NA 3' UTR (NM_010586, exon 56 of 56) 3' UTR (NM_010586, exon 56 of 56) 176121 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak2_40_19_0.756086452286319_4.69997132103052_1.23560027455358-4 chr8 105565659 105565877 + 1.23560027455358 NA TTS (NM_007427) TTS (NM_007427) 296 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_22_34_-0.879374735575468_4.68959564915723_1.23560027455358-3 chr9 47574600 47574989 + 1.23560027455358 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 44442 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-2 chr13 8871197 8871733 + 1.23560027455358 NA promoter-TSS (NM_172445) promoter-TSS (NM_172445) 271 NM_001039388 207615 Mm.284654 NM_172445 ENSMUSG00000021147 Wdr37 - WD repeat domain 37 protein-coding unique_peak1_40_19_0.756086452286319_4.69997132103052_1.23560027455358-3 chr17 23699378 23700118 + 1.23560027455358 NA Intergenic (CGG)n|Simple_repeat|Simple_repeat -15722 NM_020293 56863 Mm.491368 NM_020293 ENSMUSG00000066720 Cldn9 nmf329 claudin 9 protein-coding common_peak1_146_90_0.399344125821568_6.70746670310948_1.2348525662312 chr11 96250927 96252181 + 1.2348525662312 NA promoter-TSS (NR_037977) promoter-TSS (NR_037977) -106 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA common_peak1_80_92_-0.485776357980417_6.29627063211782_1.23432943332869 chr2 91265325 91266075 + 1.23432943332869 NA intron (NM_023854, intron 2 of 15) intron (NM_023854, intron 2 of 15) 585 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding common_peak2_79_92_-0.503571827282845_6.28737289746661_1.23432943332869 chr7 92740659 92741537 + 1.23432943332869 NA promoter-TSS (NM_029494) promoter-TSS (NM_029494) 361 NR_015510 666737 Mm.473620 NR_015510 ENSMUSG00000074024 4632427E13Rik AU015482 RIKEN cDNA 4632427E13 gene ncRNA common_peak1_112_66_0.46423351120248_6.29820594605901_1.23432943332867 chr4 43967709 43968684 + 1.23432943332867 NA exon (NM_027450, exon 2 of 5) exon (NM_027450, exon 2 of 5) 10494 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-5 chr11 91070317 91070607 + 1.23399803405144 NA Intergenic Intergenic 265771 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144 chr10 20104351 20104589 + 1.23399803405144 NA intron (NM_008580, intron 18 of 29) intron (NM_008580, intron 18 of 29) -44450 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-40 chr8 70212967 70213286 + 1.23399803405144 NA promoter-TSS (NM_001007570) promoter-TSS (NM_001007570) -845 NM_001007570 73095 Mm.185413 NM_001007570 ENSMUSG00000002346 Slc25a42 2900084M01Rik solute carrier family 25, member 42 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-15 chr14 47634720 47634941 + 1.23399803405144 NA Intergenic Intergenic -14481 NM_001347527 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-33 chr3 126921817 126922024 + 1.23399803405144 NA 3' UTR (NM_001327939, exon 46 of 46) 3' UTR (NM_001327939, exon 46 of 46) 21466 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-22 chr17 36192873 36193150 + 1.23399803405144 NA Intergenic Intergenic -2860 NM_008208 15043 Mm.426002 NM_008208 ENSMUSG00000054128 H2-T3 H-2T3|H2-Tw3|MumuTL|TL histocompatibility 2, T region locus 3 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-23 chr16 91411627 91411922 + 1.23399803405144 NA intron (NM_008349, intron 2 of 6) intron (NM_008349, intron 2 of 6) 5539 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-11 chr18 75001782 75002158 + 1.23399803405144 NA TTS (NR_028552).2 TTS (NR_028552).2 902 NR_028552 100217457 NR_028552 ENSMUSG00000064871 Snord58b MBII-199 small nucleolar RNA, C/D box 58B snoRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-23 chr17 84215059 84215330 + 1.23399803405144 NA intron (NM_183021, intron 36 of 37) intron (NM_183021, intron 36 of 37) -27247 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144 chr1 135714409 135714618 + 1.23399803405144 NA Intergenic Intergenic -5550 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-43 chr8 14476712 14476974 + 1.23399803405144 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 380968 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-32 chr5 14112727 14113141 + 1.23399803405144 NA intron (NM_011348, intron 1 of 16) intron (NM_011348, intron 1 of 16) 87658 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-6 chr11 101719695 101719948 + 1.23399803405144 NA Intergenic Intergenic -13135 NM_144831 217207 Mm.28186 NM_144831 ENSMUSG00000034931 Dhx8 Ddx8|mDEAH6|mKIAA4096 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-2 chr11 44946747 44947065 + 1.23399803405144 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 170022 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144 chr1 164307797 164308107 + 1.23399803405144 NA promoter-TSS (NM_025505) promoter-TSS (NM_025505) 280 NM_138314 171567 Mm.219428 NM_138314 ENSMUSG00000026575 Nme7 D530024H21Rik|Nm23-M7|Nm23-r7 NME/NM23 family member 7 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-2 chr10 111624314 111624750 + 1.23399803405144 NA Intergenic Intergenic -30259 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-7 chr16 30835269 30835581 + 1.23399803405144 NA Intergenic Intergenic 235702 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-13 chr13 63255601 63255870 + 1.23399803405144 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 15706 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-22 chr16 55613295 55613756 + 1.23399803405144 NA Intergenic Intergenic 118794 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-8 chr13 28824546 28824874 + 1.23399803405144 NA intron (NR_045054, intron 2 of 7) intron (NR_045054, intron 2 of 7) 60712 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-46 chr8 95136863 95137078 + 1.23399803405144 NA intron (NM_010631, intron 2 of 19) intron (NM_010631, intron 2 of 19) 5570 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-3 chr1 87608291 87608589 + 1.23399803405144 NA Intergenic Intergenic -11872 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144 chr1 135687769 135688056 + 1.23399803405144 NA Intergenic CpG -32151 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-8 chr17 45516135 45516435 + 1.23399803405144 NA intron (NM_001358000, intron 9 of 20) intron (NM_001358000, intron 9 of 20) -7149 NM_013688 21645 Mm.491193 NM_013688 ENSMUSG00000023949 Tcte1 D17Sil1|Tcte-1 t-complex-associated testis expressed 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-9 chr11 112783270 112783707 + 1.23399803405144 NA intron (NM_011448, intron 1 of 2) intron (NM_011448, intron 1 of 2) 1278 NM_011448 20682 Mm.286407 NM_011448 ENSMUSG00000000567 Sox9 2010306G03Rik|AV220920|mKIAA4243 SRY (sex determining region Y)-box 9 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-14 chr2 52930221 52930506 + 1.23399803405144 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 72495 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-23 chr8 34614867 34615126 + 1.23399803405144 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 25320 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-37 chr6 89445501 89445861 + 1.23399803405144 NA intron (NM_001167736, intron 4 of 6) intron (NM_001167736, intron 4 of 6) -83068 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-5 chr3 103057836 103058038 + 1.23399803405144 NA promoter-TSS (NM_010937) promoter-TSS (NM_010937) -348 NM_010937 18176 Mm.400954 NM_010937 ENSMUSG00000027852 Nras AV095280|N-ras neuroblastoma ras oncogene protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-8 chr11 96344790 96345077 + 1.23399803405144 NA intron (NM_001079869, intron 3 of 3) intron (NM_001079869, intron 3 of 3) 1164 NM_010458 15410 Mm.342481 NM_010458 ENSMUSG00000048763 Hoxb3 Hox-2.7 homeobox B3 protein-coding common_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144 chr10 71160416 71160703 + 1.23399803405144 NA promoter-TSS (NM_001347189) promoter-TSS (NM_001347189) -869 NM_001347189 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-36 chr6 97339070 97339288 + 1.23399803405144 NA intron (NM_145148, intron 8 of 23) intron (NM_145148, intron 8 of 23) -86399 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-3 chr13 36027763 36028172 + 1.23399803405144 NA intron (NM_201358, intron 2 of 2) intron (NM_201358, intron 2 of 2) 60061 NM_029628 76487 Mm.44745 NM_029628 ENSMUSG00000050423 Ppp1r3g 1600032L17Rik protein phosphatase 1, regulatory (inhibitor) subunit 3G protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-4 chr11 20594378 20594674 + 1.23399803405144 NA intron (NM_021372, intron 1 of 1) intron (NM_021372, intron 1 of 1) -37451 NM_001038625 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-17 chr14 64744319 64744684 + 1.23399803405144 NA intron (NM_001081177, intron 14 of 39) intron (NM_001081177, intron 14 of 39) 91970 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-14 chr13 73681553 73681943 + 1.23399803405144 NA exon (NM_028878, exon 12 of 12) exon (NM_028878, exon 12 of 12) -3725 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding common_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-3 chr9 101250551 101250854 + 1.23399803405144 NA intron (NM_001161362, intron 1 of 13) intron (NM_001161362, intron 1 of 13) 1130 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-19 chr8 11315941 11316324 + 1.23399803405144 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -3306 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-34 chr4 155850172 155850495 + 1.23399803405144 NA intron (NM_001356381, intron 1 of 15) intron (NM_001356381, intron 1 of 15) 2931 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-31 chr3 86040647 86041091 + 1.23399803405144 NA Intergenic Intergenic -38378 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-44 chr8 70904809 70905096 + 1.23399803405144 NA Intergenic B1_Mur4|SINE|Alu -1022 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-12 chr14 46819240 46819566 + 1.23399803405144 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 2839 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-9 chr12 27305462 27305681 + 1.23399803405144 NA Intergenic Intergenic 37147 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-22 chr9 57975386 57975849 + 1.23399803405144 NA Intergenic Intergenic -22407 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-9 chr17 74871135 74871359 + 1.23399803405144 NA Intergenic Intergenic -134282 NM_019919 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-5 chr13 35659910 35660184 + 1.23399803405144 NA intron (NM_009881, intron 1 of 9) intron (NM_009881, intron 1 of 9) 185 NM_009881 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-2 chr13 38422390 38422586 + 1.23399803405144 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 39305 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-34 chr5 124095269 124095584 + 1.23399803405144 NA intron (NM_019875, intron 1 of 11) intron (NM_019875, intron 1 of 11) 372 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-41 chr7 65468110 65468461 + 1.23399803405144 NA Intergenic Intergenic -97041 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-7 chr12 72535706 72535998 + 1.23399803405144 NA promoter-TSS (NM_026327) promoter-TSS (NM_026327) -505 NM_026327 67708 Mm.11233 NM_026327 ENSMUSG00000034501 Pcnx4 1810048J11Rik|4932413O10|AU017192|Pcnxl4 pecanex homolog 4 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-13 chr2 4476348 4476677 + 1.23399803405144 NA intron (NM_001177843, intron 3 of 23) intron (NM_001177843, intron 3 of 23) 75536 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-11 chr12 33184254 33184464 + 1.23399803405144 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 36673 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-17 chr14 57571795 57572083 + 1.23399803405144 NA promoter-TSS (NM_026526) promoter-TSS (NM_026526) 325 NR_152103 67518 Mm.376343 NR_152103 ENSMUSG00000097933 1700039M10Rik - RIKEN cDNA 1700039M10 gene ncRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-24 chr19 8897253 8897454 + 1.23399803405144 NA promoter-TSS (NM_008060) promoter-TSS (NM_008060) -704 NM_001293621 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-43 chr9 64117170 64117586 + 1.23399803405144 NA intron (NM_145835, intron 1 of 13) intron (NM_145835, intron 1 of 13) 231 NM_145835 235435 Mm.436581 NM_145835 ENSMUSG00000032401 Lctl E130104I05Rik|KLPH lactase-like protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-39 chr7 48749739 48750088 + 1.23399803405144 NA Intergenic Intergenic -39090 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-50 chr9 123463675 123464155 + 1.23399803405144 NA Intergenic Intergenic -14786 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-18 chr7 109584387 109584608 + 1.23399803405144 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 32071 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-6 chr10 80656152 80656362 + 1.23399803405144 NA exon (NM_145361, exon 1 of 9) exon (NM_145361, exon 1 of 9) 814 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-16 chr14 55667817 55668128 + 1.23399803405144 NA intron (NM_008683, intron 1 of 3) intron (NM_008683, intron 1 of 3) 3934 NM_008683 18002 Mm.296566 NM_008683 ENSMUSG00000010376 Nedd8 Rub1 neural precursor cell expressed, developmentally down-regulated gene 8 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-25 chrX 159814039 159814288 + 1.23399803405144 NA intron (NM_021389, intron 3 of 16) intron (NM_021389, intron 3 of 16) -26305 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-42 chr8 121903582 121903784 + 1.23399803405144 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 4003 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-16 chr13 99344308 99344554 + 1.23399803405144 NA promoter-TSS (NM_173757) promoter-TSS (NM_173757) 247 NM_026873 68927 Mm.276502 NM_026873 ENSMUSG00000021650 Ptcd2 1190005P08Rik pentatricopeptide repeat domain 2 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-18 chr14 66867675 66867873 + 1.23399803405144 NA intron (NM_009955, intron 1 of 13) intron (NM_009955, intron 1 of 13) 826 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-21 chr7 28359763 28360098 + 1.23399803405144 NA exon (NM_001083912, exon 19 of 19) exon (NM_001083912, exon 19 of 19) 8390 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-24 chr17 26781596 26781947 + 1.23399803405144 NA intron (NM_172149, intron 1 of 5) intron (NM_172149, intron 1 of 5) 692 NM_172149 224630 Mm.21795 NM_172149 ENSMUSG00000024191 Bnip1 2010005M06Rik|5930429G21Rik|Sec20 BCL2/adenovirus E1B interacting protein 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-3 chr10 93294999 93295374 + 1.23399803405144 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 15973 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-20 chr8 105750983 105751239 + 1.23399803405144 NA intron (NM_027469, intron 1 of 2) intron (NM_027469, intron 1 of 2) 7496 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-45 chr9 104062132 104062389 + 1.23399803405144 NA intron (NM_025692, intron 1 of 11) intron (NM_025692, intron 1 of 11) 861 NM_025692 66663 Mm.224935 NM_025692 ENSMUSG00000032557 Uba5 5730525G14Rik|AW240750|Ube1dc1 ubiquitin-like modifier activating enzyme 5 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-19 chr15 53159433 53159629 + 1.23399803405144 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 186652 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-35 chr5 35691839 35692166 + 1.23399803405144 NA Intergenic Intergenic -12222 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-5 chr1 171375466 171375720 + 1.23399803405144 NA intron (NM_001122680, intron 1 of 7) intron (NM_001122680, intron 1 of 7) 5420 NM_001122680 71740 Mm.263414 NM_027893 ENSMUSG00000006411 Nectin4 1200017F15Rik|Prr4|Pvrl4 nectin cell adhesion molecule 4 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-49 chr9 99129983 99130252 + 1.23399803405144 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 10094 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-37 chr6 146271641 146271986 + 1.23399803405144 NA intron (NM_019923, intron 37 of 56) intron (NM_019923, intron 37 of 56) 230410 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-7 chr8 120264966 120265198 + 1.23399803405144 NA Intergenic Intergenic -36852 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-6 chr11 62831225 62831577 + 1.23399803405144 NA intron (NM_053169, intron 2 of 5) intron (NM_053169, intron 2 of 5) 11148 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-25 chr17 35696813 35697072 + 1.23399803405144 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 3648 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-42 chr7 132730656 132731183 + 1.23399803405144 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 45997 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-33 chr5 34530030 34530355 + 1.23399803405144 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 4408 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-10 chr11 113221757 113222001 + 1.23399803405144 NA Intergenic Intergenic -12210 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-16 chr2 127070901 127071196 + 1.23399803405144 NA intron (NM_026678, intron 1 of 7) (CCCCCA)n|Simple_repeat|Simple_repeat 391 NM_026678 109778 Mm.22028 NM_026678 ENSMUSG00000001999 Blvra 0610006A11Rik|2500001N03Rik|Blvr biliverdin reductase A protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-25 chr19 32284516 32284786 + 1.23399803405144 NA intron (NM_001168525, intron 2 of 9) intron (NM_001168525, intron 2 of 9) 64665 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-28 chr2 120093933 120094305 + 1.23399803405144 NA intron (NM_133838, intron 5 of 5) intron (NM_133838, intron 5 of 5) 60456 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-2 chr1 64736152 64736359 + 1.23399803405144 NA exon (NM_022721, exon 2 of 2) exon (NM_022721, exon 2 of 2) 1495 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-8 chr11 90687036 90687493 + 1.23399803405144 NA intron (NM_028011, intron 1 of 15) intron (NM_028011, intron 1 of 15) 337 NM_001357544 71943 Mm.167868 NM_028011 ENSMUSG00000020541 Tom1l1 2310045L10Rik|C80573|Srcasm target of myb1-like 1 (chicken) protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-15 chr2 117806007 117806269 + 1.23399803405144 NA non-coding (NR_126427, exon 3 of 3) non-coding (NR_126427, exon 3 of 3) 6664 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-18 chr4 89395595 89395851 + 1.23399803405144 NA intron (NR_132431, intron 4 of 9) intron (NR_132431, intron 4 of 9) -84691 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-10 chr12 35287405 35287655 + 1.23399803405144 NA Intergenic Intergenic -92633 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-36 chr6 39420140 39420550 + 1.23399803405144 NA promoter-TSS (NM_001311109) promoter-TSS (NM_001311109) 24 NM_018810 54484 Mm.270484 NM_018810 ENSMUSG00000029922 Mkrn1 RFP makorin, ring finger protein, 1 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-9 chr13 41670318 41670656 + 1.23399803405144 NA Intergenic Intergenic 64271 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-13 chr13 5842287 5842555 + 1.23399803405144 NA Intergenic GA-rich|Low_complexity|Low_complexity 15671 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144 chr12 76571956 76572184 + 1.23399803405144 NA intron (NM_153804, intron 15 of 18) intron (NM_153804, intron 15 of 18) -24145 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-2 chr12 31055333 31055756 + 1.23399803405144 NA Intergenic Intergenic -18424 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding common_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-2 chr6 112261889 112262096 + 1.23399803405144 NA Intergenic G-rich|Low_complexity|Low_complexity -11766 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-7 chr11 75538444 75538652 + 1.23399803405144 NA intron (NM_001199284, intron 2 of 13) intron (NM_001199284, intron 2 of 13) 6436 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-20 chr6 107567331 107567639 + 1.23399803405144 NA exon (NM_008516, exon 2 of 2) exon (NM_008516, exon 2 of 2) 37759 NM_008516 16979 Mm.428543 NM_008516 ENSMUSG00000034648 Lrrn1 2810047E21Rik|NLRR-1 leucine rich repeat protein 1, neuronal protein-coding common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-4 chr18 36511313 36511549 + 1.23399803405144 NA intron (NM_010415, intron 3 of 5) intron (NM_010415, intron 3 of 5) 4374 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-12 chr12 116294211 116294551 + 1.23399803405144 NA intron (NM_028731, intron 1 of 21) intron (NM_028731, intron 1 of 21) 13159 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-15 chr18 82486132 82486395 + 1.23399803405144 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 11140 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-3 chr11 76946171 76946409 + 1.23399803405144 NA exon (NM_178645, exon 2 of 12) exon (NM_178645, exon 2 of 12) 634 NM_178645 104184 Mm.399785 NM_178645 ENSMUSG00000020840 Blmh AI035728|Bh|Bmh bleomycin hydrolase protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-18 chr14 69547258 69547552 + 1.23399803405144 NA TTS (NR_045091).2 TTS (NR_045091).2 7982 NR_045091 100504477 Mm.396396 NR_045091 ENSMUSG00000097511 Gm16677 - predicted gene, 16677 ncRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-26 chr2 6351814 6352180 + 1.23399803405144 NA promoter-TSS (NM_181399) promoter-TSS (NM_181399) -739 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-27 chr19 16898045 16898286 + 1.23399803405144 NA Intergenic Intergenic -24335 NM_008023 14240 Mm.7971 NM_008023 ENSMUSG00000056829 Foxb2 Fkh4 forkhead box B2 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-39 chr8 67910544 67910891 + 1.23399803405144 NA intron (NM_177698, intron 3 of 14) intron (NM_177698, intron 3 of 14) 229 NM_030263 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-11 chr13 113339771 113340116 + 1.23399803405144 NA Intergenic Intergenic 130284 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144 chr1 39548305 39548630 + 1.23399803405144 NA TTS (NR_028555) TTS (NR_028555) 373 NR_028555 100217461 NR_028555 ENSMUSG00000077704 Snord89 MBII-289 small nucleolar RNA, C/D box 89 snoRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-27 chr2 60549517 60549739 + 1.23399803405144 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 3680 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-26 chr18 61047942 61048276 + 1.23399803405144 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 2959 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-19 chr15 77790351 77790544 + 1.23399803405144 NA intron (NM_022410, intron 9 of 40) intron (NM_022410, intron 9 of 40) -33437 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-28 chr2 72977905 72978330 + 1.23399803405144 NA intron (NM_001018042, intron 3 of 6) intron (NM_001018042, intron 3 of 6) 1164 NM_001098425 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-10 chr18 69400952 69401207 + 1.23399803405144 NA intron (NM_001361128, intron 3 of 19) intron (NM_001361128, intron 3 of 19) 54919 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-44 chr9 92550004 92550223 + 1.23399803405144 NA intron (NM_011961, intron 1 of 18) intron (NM_011961, intron 1 of 18) -7244 NR_029474 78575 Mm.407669 NR_029474 ENSMUSG00000103622 B430319G15Rik D530025C14Rik RIKEN cDNA B430319G15 gene ncRNA common_peak2_19_7_1.04969694297167_3.52484847148584_1.23399803405144-2 chr2 122765582 122765857 + 1.23399803405144 NA intron (NM_001162503, intron 1 of 9) intron (NM_001162503, intron 1 of 9) 360 NM_001162503 59010 Mm.28986 NM_021507 ENSMUSG00000005803 Sqor 0610039J17Rik|4930557M22Rik|Sqrdl sulfide quinone oxidoreductase protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-21 chr16 4651153 4651526 + 1.23399803405144 NA TTS (NM_139307) TTS (NM_139307) 11394 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-19 chr5 36177224 36177433 + 1.23399803405144 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -26693 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-4 chr12 99029234 99029628 + 1.23399803405144 NA Intergenic Intergenic 108819 NM_198311 76260 Mm.282660 NM_029553 ENSMUSG00000021013 Ttc8 0610012F22Rik|AV001447|BBS8 tetratricopeptide repeat domain 8 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-29 chr2 155895730 155895991 + 1.23399803405144 NA intron (NM_001355443, intron 6 of 9) intron (NM_001355443, intron 6 of 9) 34450 NM_001355443 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-4 chr10 96632150 96632656 + 1.23399803405144 NA Intergenic B3|SINE|B2 15402 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-2 chr10 24373497 24373826 + 1.23399803405144 NA Intergenic Intergenic 150144 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-22 chr7 28596335 28596596 + 1.23399803405144 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 1719 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-47 chr8 110803968 110804411 + 1.23399803405144 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 1735 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-29 chr2 126030347 126030636 + 1.23399803405144 NA intron (NM_029455, intron 11 of 16) intron (NM_029455, intron 11 of 16) -4167 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-4 chr1 134191755 134192146 + 1.23399803405144 NA Intergenic Intergenic -1498 NM_001357515 53311 Mm.379067 NM_016749 ENSMUSG00000042451 Mybph AI385643|MyBP-H myosin binding protein H protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-16 chr3 41212655 41212990 + 1.23399803405144 NA Intergenic Intergenic -129776 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-40 chr7 64989700 64990220 + 1.23399803405144 NA intron (NM_183087, intron 1 of 9) intron (NM_183087, intron 1 of 9) -116920 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-38 chr6 134521511 134521908 + 1.23399803405144 NA intron (NM_008514, intron 2 of 22) intron (NM_008514, intron 2 of 22) 45204 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-35 chr6 43251554 43251853 + 1.23399803405144 NA Intergenic Intergenic -13941 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-12 chr19 16872766 16873123 + 1.23399803405144 NA exon (NM_008023, exon 1 of 1) exon (NM_008023, exon 1 of 1) 886 NM_008023 14240 Mm.7971 NM_008023 ENSMUSG00000056829 Foxb2 Fkh4 forkhead box B2 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-20 chr15 80057850 80058350 + 1.23399803405144 NA Intergenic Intergenic 20479 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-51 chrX 136291337 136291638 + 1.23399803405144 NA Intergenic Intergenic 21234 NM_001110234 12070 Mm.90787 NM_009750 ENSMUSG00000046432 Bex3 AL033356|DXWsu67e|Gcap27|Nade|Ngfrap1 brain expressed X-linked 3 protein-coding common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-6 chr5 90853358 90853548 + 1.23399803405144 NA Intergenic Intergenic -37792 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-38 chr7 90085903 90086153 + 1.23399803405144 NA Intergenic Intergenic 43446 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-11 chr12 86880532 86880872 + 1.23399803405144 NA TTS (NM_145836) TTS (NM_145836) 4112 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-5 chr11 59601175 59601403 + 1.23399803405144 NA Intergenic Intergenic -11202 NM_146429 258421 Mm.377490 NM_146429 ENSMUSG00000048919 Olfr223 MOR256-30 olfactory receptor 223 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-13 chr15 64685184 64685455 + 1.23399803405144 NA Intergenic Intergenic 236977 NM_001331075 11514 Mm.1425 NM_009623 ENSMUSG00000022376 Adcy8 AC8|AW060868 adenylate cyclase 8 protein-coding common_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-4 chr5 129847041 129847279 + 1.23399803405144 NA TTS (NM_009838) TTS (NM_009838) 170 NM_026445 67902 Mm.103546 NM_026445 ENSMUSG00000025538 Sumf2 2610040F05Rik sulfatase modifying factor 2 protein-coding common_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144 chr12 76371581 76371849 + 1.23399803405144 NA intron (NM_178744, intron 1 of 1) intron (NM_178744, intron 1 of 1) 1449 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-31 chr3 116380672 116381071 + 1.23399803405144 NA intron (NM_001080818, intron 4 of 15) intron (NM_001080818, intron 4 of 15) -26627 NM_001355646 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-6 chr15 22338543 22338995 + 1.23399803405144 NA Intergenic Intergenic 376215 NM_001165971 545091 Mm.475598 NM_001165971 Hnrnpa1l2-ps2 EG545091|Gm5803 heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 protein-coding common_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-3 chr13 53720906 53721139 + 1.23399803405144 NA Intergenic Intergenic 72437 NR_131010 75252 Mm.401989 NR_131010 ENSMUSG00000113329 4930555G21Rik - RIKEN cDNA 4930555G21 gene ncRNA unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-17 chr4 55708501 55708834 + 1.23399803405144 NA Intergenic Intergenic -176192 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-21 chr8 126870552 126870888 + 1.23399803405144 NA Intergenic Intergenic 21700 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-21 chr16 45077300 45077618 + 1.23399803405144 NA Intergenic Intergenic -16552 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-14 chr13 16008153 16008524 + 1.23399803405144 NA intron (NR_155430, intron 1 of 3) intron (NR_155430, intron 1 of 3) -3513 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-30 chr3 7453482 7453708 + 1.23399803405144 NA Intergenic Intergenic -49831 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-48 chr8 128429131 128429555 + 1.23399803405144 NA intron (NM_001358959, intron 4 of 16) intron (NM_001358959, intron 4 of 16) 70102 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-12 chr13 45840336 45840579 + 1.23399803405144 NA intron (NM_001199304, intron 3 of 6) intron (NM_001199304, intron 3 of 6) 124534 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-32 chr3 122458467 122458719 + 1.23399803405144 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -24976 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-14 chr15 76241731 76242055 + 1.23399803405144 NA exon (NM_001163575, exon 5 of 11) exon (NM_001163575, exon 5 of 11) 1547 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-30 chr2 167562158 167562522 + 1.23399803405144 NA Intergenic (CCTG)n|Simple_repeat|Simple_repeat 24145 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-45 chr8 85431337 85431667 + 1.23399803405144 NA intron (NM_025722, intron 1 of 3) intron (NM_025722, intron 1 of 3) 1339 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding unique_peak1_19_7_1.04969694297167_3.52484847148584_1.23399803405144-41 chr8 103347148 103347399 + 1.23399803405144 NA non-coding (NR_036588, exon 2 of 3) non-coding (NR_036588, exon 2 of 3) 261 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-24 chr8 117388111 117388360 + 1.23399803405144 NA intron (NM_028941, intron 3 of 20) intron (NM_028941, intron 3 of 20) 39065 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_19_7_1.04969694297167_3.52484847148584_1.23399803405144 chr1 133843621 133843839 + 1.23399803405144 NA Intergenic Intergenic 63443 NM_054076 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-20 chr15 63364918 63365172 + 1.23399803405144 NA Intergenic Intergenic 114563 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak2_7_17_-1.43282997765127_3.45351001261668_1.23399803405144-17 chr6 91683067 91683275 + 1.23399803405144 NA promoter-TSS (NM_009320) promoter-TSS (NM_009320) -896 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-7 chr11 78115658 78115937 + 1.23399803405144 NA intron (NM_145430, intron 1 of 2) intron (NM_145430, intron 1 of 2) 21124 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-3 chr11 8657139 8657417 + 1.23399803405144 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 7257 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-52 chrX 142900187 142900499 + 1.23399803405144 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 66385 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding unique_peak2_8_17_-1.26410379362312_3.53787310463075_1.23399803405144-10 chr13 73773128 73773466 + 1.23399803405144 NA intron (NM_001360694, intron 1 of 24) intron (NM_001360694, intron 1 of 24) 9600 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_20_7_1.11958967559262_3.55979483779631_1.23399803405144-15 chr13 99093157 99093524 + 1.23399803405144 NA Intergenic Intergenic -5419 NR_045495 69603 Mm.390632 NR_045495 ENSMUSG00000100410 2310020H05Rik - RIKEN cDNA 2310020H05 gene ncRNA common_peak2_143_152_-0.379786553166436_7.06749456610943_1.23321473174051 chr8 84968780 84970852 + 1.23321473174051 NA intron (NM_011563, intron 1 of 5) intron (NM_011563, intron 1 of 5) 194 NM_011563 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding common_peak2_300_293_-0.26588072419929_8.06673198273672_1.23220678743322 chr3 122508975 122512530 + 1.23220678743322 NA intron (NM_013867, intron 5 of 11) intron (NM_013867, intron 5 of 11) 27183 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak1_44_57_-0.646612847700988_5.53467457127708_1.23216191351737-2 chr7 127841919 127842417 + 1.23216191351737 NA intron (NM_009294, intron 1 of 10) CpG 360 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding common_peak2_44_57_-0.646612847700988_5.53467457127708_1.23216191351737 chr12 111456218 111456849 + 1.23216191351737 NA Intergenic Intergenic 13872 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_44_57_-0.646612847700988_5.53467457127708_1.23216191351737 chr11 76243370 76244345 + 1.23216191351737 NA promoter-TSS (NM_026029) promoter-TSS (NM_026029) 121 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding common_peak1_69_37_0.596373499528974_5.54611426320807_1.23216191351736-3 chr18 36669746 36670282 + 1.23216191351736 NA exon (NM_001164406, exon 2 of 4) exon (NM_001164406, exon 2 of 4) 297 NM_001164406 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding unique_peak1_69_37_0.596373499528974_5.54611426320807_1.23216191351736 chr12 98920356 98921062 + 1.23216191351736 NA promoter-TSS (NM_198311) promoter-TSS (NM_198311) 97 NM_198311 76260 Mm.282660 NM_029553 ENSMUSG00000021013 Ttc8 0610012F22Rik|AV001447|BBS8 tetratricopeptide repeat domain 8 protein-coding common_peak1_68_37_0.575761390580124_5.53580820873365_1.23216191351736-4 chr7 130647022 130647561 + 1.23216191351736 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -45265 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_68_37_0.575761390580124_5.53580820873365_1.23216191351736-5 chr8 71676056 71677081 + 1.23216191351736 NA 5' UTR (NM_010589, exon 1 of 25) 5' UTR (NM_010589, exon 1 of 25) 185 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding common_peak1_68_37_0.575761390580124_5.53580820873365_1.23216191351736-6 chr9 65214722 65215901 + 1.23216191351736 NA intron (NM_177460, intron 1 of 6) CpG 621 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_68_37_0.575761390580124_5.53580820873365_1.23216191351736-2 chr1 183933286 183933909 + 1.23216191351736 NA Intergenic Intergenic 100401 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_68_37_0.575761390580124_5.53580820873365_1.23216191351736-3 chr3 96159680 96160303 + 1.23216191351736 NA 3' UTR (NM_001025614, exon 12 of 12) 3' UTR (NM_001025614, exon 12 of 12) -1979 NM_181409 194126 Mm.268536 NM_181409 ENSMUSG00000045934 Mtmr11 AI035306|BC051083|Cra myotubularin related protein 11 protein-coding common_peak1_69_37_0.596373499528974_5.54611426320807_1.23216191351736-4 chr4 109116981 109117945 + 1.23216191351736 NA intron (NM_001355190, intron 2 of 21) intron (NM_001355190, intron 2 of 21) 573 NM_173350 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak2_68_37_0.575761390580124_5.53580820873365_1.23216191351736-2 chr17 74338779 74339621 + 1.23216191351736 NA exon (NM_001162870, exon 1 of 17) exon (NM_001162870, exon 1 of 17) 213 NM_016962 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding common_peak2_68_37_0.575761390580124_5.53580820873365_1.23216191351736 chr1 62719586 62720287 + 1.23216191351736 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 16619 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_69_37_0.596373499528974_5.54611426320807_1.23216191351736-2 chr14 25489046 25490005 + 1.23216191351736 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 30340 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_69_37_0.596373499528974_5.54611426320807_1.23216191351736 chr10 128096962 128097693 + 1.23216191351736 NA intron (NM_054078, intron 2 of 29) CpG 4544 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_68_37_0.575761390580124_5.53580820873365_1.23216191351736 chr1 177014514 177015153 + 1.23216191351736 NA intron (NM_001357390, intron 18 of 18) intron (NM_001357390, intron 18 of 18) -178700 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-7 chr10 63977504 63977711 + 1.23214870625617 NA intron (NM_178678, intron 2 of 2) intron (NM_178678, intron 2 of 2) 112648 NM_178678 216028 Mm.431318 NM_178678 ENSMUSG00000042846 Lrrtm3 9630044H04Rik leucine rich repeat transmembrane neuronal 3 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-13 chr11 74973317 74973506 + 1.23214870625617 NA intron (NM_001002764, intron 8 of 18) intron (NM_001002764, intron 8 of 18) 47539 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-8 chr15 58213015 58213255 + 1.23214870625617 NA intron (NM_026346, intron 1 of 8) intron (NM_026346, intron 1 of 8) 1757 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-18 chr4 95472913 95473154 + 1.23214870625617 NA Intergenic Intergenic -84474 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-10 chr19 44853605 44853809 + 1.23214870625617 NA Intergenic Intergenic -17769 NR_045315 73322 Mm.250457 NR_045315 ENSMUSG00000092369 1700039E22Rik - RIKEN cDNA 1700039E22 gene ncRNA unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-23 chr8 47459715 47459945 + 1.23214870625617 NA Intergenic B1_Mur4|SINE|Alu 73640 NM_177240 320714 Mm.39461 NM_177240 ENSMUSG00000038102 Trappc11 AW558465|D030016E14Rik|R75422 trafficking protein particle complex 11 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-2 chr1 86531104 86531340 + 1.23214870625617 NA TTS (NM_001360831) TTS (NM_001360831) 4665 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-13 chr4 27345354 27345575 + 1.23214870625617 NA Intergenic Intergenic -640015 NR_040656 75360 Mm.67233 NR_040656 ENSMUSG00000086257 4930548K13Rik - RIKEN cDNA 4930548K13 gene ncRNA unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-21 chr8 127307552 127307767 + 1.23214870625617 NA intron (NM_001013580, intron 2 of 13) intron (NM_001013580, intron 2 of 13) 8007 NM_001013580 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-17 chr3 129295284 129295542 + 1.23214870625617 NA intron (NM_007934, intron 10 of 19) intron (NM_007934, intron 10 of 19) 37336 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-3 chr10 17331538 17331762 + 1.23214870625617 NA Intergenic Intergenic -235868 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-2 chr10 23568004 23568203 + 1.23214870625617 NA Intergenic Intergenic 217348 NR_037680 100529074 Mm.371846 NR_037680 ENSMUSG00000070063 Snora33 ACA33|MBI-42 small nucleolar RNA, H/ACA box 33 snoRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-4 chr11 69094140 69094327 + 1.23214870625617 NA Intergenic Intergenic -4716 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617 chr10 22223097 22223330 + 1.23214870625617 NA intron (NM_009018, intron 6 of 6) B4A|SINE|B4 49311 NM_009018 19370 Mm.439724 NM_009018 Raet1c RAE-1gamma retinoic acid early transcript gamma protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-42 chr6 89064712 89064915 + 1.23214870625617 NA Intergenic Intergenic -31297 NR_134978 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-21 chr6 125353339 125353528 + 1.23214870625617 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 3710 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-45 chr7 96152405 96152654 + 1.23214870625617 NA Intergenic B3|SINE|B2 -18715 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-40 chr5 36377996 36378312 + 1.23214870625617 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 19985 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-47 chr7 141329547 141329789 + 1.23214870625617 NA intron (NM_027797, intron 1 of 5) intron (NM_027797, intron 1 of 5) 1538 NM_027797 71448 Mm.248960 NM_027797 ENSMUSG00000025505 Tmem80 5530601I19Rik transmembrane protein 80 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-34 chr3 102489646 102489882 + 1.23214870625617 NA intron (NM_001112698, intron 1 of 2) MER91A|DNA|hAT-Tip100 19845 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-21 chr14 13023054 13023241 + 1.23214870625617 NA Intergenic Intergenic -200068 NM_001359919 27062 Mm.260881 NM_012061 ENSMUSG00000054423 Cadps AU067781|CAPS|CAPS1|mKIAA1121 Ca2+-dependent secretion activator protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-18 chr5 135884299 135884539 + 1.23214870625617 NA Intergenic Intergenic -3500 NM_013560 15507 Mm.13849 NM_013560 ENSMUSG00000004951 Hspb1 27kDa|Hsp25 heat shock protein 1 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-8 chr17 88594713 88594935 + 1.23214870625617 NA Intergenic Intergenic -31731 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-14 chr19 30135962 30136163 + 1.23214870625617 NA intron (NM_138595, intron 11 of 24) intron (NM_138595, intron 11 of 24) 39379 NM_138595 104174 Mm.274852 NM_138595 ENSMUSG00000024827 Gldc D030049L12Rik|D19Wsu57e|b2b2679Clo glycine decarboxylase protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-11 chr19 27854808 27855046 + 1.23214870625617 NA intron (NM_001166414, intron 5 of 18) intron (NM_001166414, intron 5 of 18) 154846 NM_001360358 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-41 chr5 111059005 111059192 + 1.23214870625617 NA intron (NM_001267622, intron 2 of 22) intron (NM_001267622, intron 2 of 22) 54954 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-24 chr8 128098564 128098766 + 1.23214870625617 NA Intergenic Intergenic 179560 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617 chr1 134274874 134275095 + 1.23214870625617 NA Intergenic Intergenic -15020 NM_031189 17928 Mm.16528 NM_031189 ENSMUSG00000026459 Myog MYF4|bHLHc3|myo myogenin protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-11 chr18 36350687 36350924 + 1.23214870625617 NA intron (NM_001081365, intron 1 of 2) B1_Mur3|SINE|Alu 2181 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-3 chr1 134902414 134902627 + 1.23214870625617 NA intron (NM_001081307, intron 1 of 23) intron (NM_001081307, intron 1 of 23) 53420 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-11 chr11 20584831 20585019 + 1.23214870625617 NA intron (NM_021372, intron 1 of 1) intron (NM_021372, intron 1 of 1) 41672 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-20 chr6 28680848 28681054 + 1.23214870625617 NA intron (NM_019776, intron 12 of 23) intron (NM_019776, intron 12 of 23) 150796 NM_138682 192198 Mm.443660 NM_138682 ENSMUSG00000049939 Lrrc4 MBAG1|NGL-2|NGL2|NLG-2|Nag14 leucine rich repeat containing 4 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-28 chr18 38099384 38099574 + 1.23214870625617 NA Intergenic Intergenic -100510 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-19 chr6 38630270 38630468 + 1.23214870625617 NA exon (NM_001033171, exon 2 of 5) exon (NM_001033171, exon 2 of 5) 6870 NM_001033171 74253 Mm.121859 NM_001033171 ENSMUSG00000071537 Klrg2 2310020F24Rik killer cell lectin-like receptor subfamily G, member 2 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-15 chr2 150214764 150214963 + 1.23214870625617 NA Intergenic Intergenic -3236 NM_001142411 245174 Mm.378428 NM_001142411 ENSMUSG00000060336 Zfp937 EG245174|Gm4979|ZIPO-I zinc finger protein 937 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-52 chr9 103081539 103081736 + 1.23214870625617 NA intron (NM_033314, intron 11 of 13) intron (NM_033314, intron 11 of 13) -30437 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-24 chr15 84994980 84995189 + 1.23214870625617 NA Intergenic Intergenic -7113 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-15 chr12 54263702 54263899 + 1.23214870625617 NA Intergenic Intergenic 30185 NR_108033 73592 Mm.416874 NR_108033 ENSMUSG00000112821 1700104L18Rik - RIKEN cDNA 1700104L18 gene ncRNA unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-32 chr2 154680437 154680626 + 1.23214870625617 NA intron (NM_029362, intron 1 of 4) intron (NM_029362, intron 1 of 4) 23505 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-25 chr15 94629249 94629458 + 1.23214870625617 NA intron (NM_178789, intron 1 of 7) CpG 168 NM_178789 320709 Mm.74873 NM_178789 ENSMUSG00000063296 Tmem117 B930062P21Rik transmembrane protein 117 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-16 chr3 57277876 57278077 + 1.23214870625617 NA Intergenic Intergenic 24012 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-10 chr11 3881568 3881772 + 1.23214870625617 NA Intergenic Intergenic 13456 NM_026150 67430 Mm.347950 NM_026150 ENSMUSG00000020434 4921536K21Rik AV043724 RIKEN cDNA 4921536K21 gene protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-25 chr9 98271151 98271350 + 1.23214870625617 NA Intergenic Intergenic -25320 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-44 chr7 25429569 25429875 + 1.23214870625617 NA intron (NR_015569, intron 4 of 6) intron (NR_015569, intron 4 of 6) -16836 NM_153576 232983 Mm.10545 NM_153576 ENSMUSG00000060188 Cxcl17 VCC-1|Vcc1 chemokine (C-X-C motif) ligand 17 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-17 chr13 33121047 33121315 + 1.23214870625617 NA Intergenic Intergenic 37078 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-10 chr18 37880583 37880806 + 1.23214870625617 NA intron (NM_007858, intron 16 of 26) intron (NM_007858, intron 16 of 26) -26034 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-5 chr12 73200941 73201178 + 1.23214870625617 NA intron (NM_008612, intron 6 of 7) intron (NM_008612, intron 6 of 7) 77342 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-14 chr11 85573716 85573904 + 1.23214870625617 NA intron (NM_138681, intron 21 of 25) intron (NM_138681, intron 21 of 25) 145934 NR_045875 71489 Mm.442482 NR_045875 ENSMUSG00000086199 Bcas3os1 8430403D17Rik breast carcinoma amplified sequence 3, opposite strand 1 ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-22 chr7 89520235 89520432 + 1.23214870625617 NA intron (NM_001360752, intron 1 of 1) MIR|SINE|MIR -1788 NM_001360753 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-2 chr1 132208044 132208267 + 1.23214870625617 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) 10067 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-24 chr8 126946143 126946344 + 1.23214870625617 NA promoter-TSS (NM_024214) promoter-TSS (NM_024214) -322 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-13 chr19 28190460 28190653 + 1.23214870625617 NA Intergenic Intergenic -179390 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-6 chr13 99399796 99400029 + 1.23214870625617 NA intron (NM_173757, intron 4 of 10) intron (NM_173757, intron 4 of 10) 12914 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-6 chr15 63406539 63406788 + 1.23214870625617 NA Intergenic MLT1M|LTR|ERVL-MaLR 72945 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-14 chr2 132614241 132614542 + 1.23214870625617 NA non-coding (NR_033468, exon 3 of 6) non-coding (NR_033468, exon 3 of 6) 16195 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-15 chr4 121213096 121213299 + 1.23214870625617 NA intron (NM_001346660, intron 1 of 7) intron (NM_001346660, intron 1 of 7) 1887 NM_001346660 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-38 chr4 57640547 57640825 + 1.23214870625617 NA intron (NM_001304544, intron 2 of 8) MIRb|SINE|MIR 72438 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-23 chr15 53615232 53615498 + 1.23214870625617 NA intron (NM_177225, intron 4 of 4) MLT1H1|LTR|ERVL-MaLR -1086 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-43 chr6 131348392 131348591 + 1.23214870625617 NA Intergenic MTEa|LTR|ERVL-MaLR -34664 NM_172891 243659 Mm.20114 NM_172891 ENSMUSG00000032899 Styk1 9130025L13|AI326477|Nok serine/threonine/tyrosine kinase 1 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-16 chr4 129008364 129008655 + 1.23214870625617 NA non-coding (NR_138540, exon 6 of 7) non-coding (NR_138540, exon 6 of 7) 15285 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-3 chr1 132152765 132152952 + 1.23214870625617 NA Intergenic B1_Mus2|SINE|Alu -13173 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-5 chr10 127676247 127676451 + 1.23214870625617 NA promoter-TSS (NM_001113211) promoter-TSS (NM_001113211) -716 NM_173732 210035 Mm.251075 NM_173732 ENSMUSG00000040195 Nemp1 Tmem194|Tmem194a nuclear envelope integral membrane protein 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-33 chr3 61317367 61317579 + 1.23214870625617 NA Intergenic Intergenic -47034 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-8 chr10 64075635 64075824 + 1.23214870625617 NA intron (NM_178678, intron 2 of 2) intron (NM_178678, intron 2 of 2) 14526 NM_178678 216028 Mm.431318 NM_178678 ENSMUSG00000042846 Lrrtm3 9630044H04Rik leucine rich repeat transmembrane neuronal 3 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-12 chr2 117949246 117949448 + 1.23214870625617 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 127419 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-48 chr8 36599671 36599862 + 1.23214870625617 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 14177 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-46 chr7 112253654 112253865 + 1.23214870625617 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 27923 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-22 chr14 55644499 55644704 + 1.23214870625617 NA promoter-TSS (NM_028780) promoter-TSS (NM_028780) -795 NM_028780 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-6 chr10 26545355 26545546 + 1.23214870625617 NA Intergenic Intergenic 129201 NR_033633 667572 Mm.482728 NR_033633 ENSMUSG00000098179 Gm8709 EG667572 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-7 chr16 16202619 16202856 + 1.23214870625617 NA Intergenic Intergenic -10608 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-20 chr6 108313780 108314037 + 1.23214870625617 NA intron (NM_010585, intron 4 of 61) ID2|SINE|ID 100812 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-39 chr4 133660877 133661078 + 1.23214870625617 NA TTS (NM_001145956) TTS (NM_001145956) 11670 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-29 chr19 28313725 28313934 + 1.23214870625617 NA intron (NM_175459, intron 7 of 10) intron (NM_175459, intron 7 of 10) -302663 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-7 chr15 62533485 62533701 + 1.23214870625617 NA Intergenic Intergenic -314142 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-17 chr5 113138327 113138526 + 1.23214870625617 NA 5' UTR (NM_001347397, exon 1 of 8) 5' UTR (NM_001347397, exon 1 of 8) 159 NM_001347397 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-26 chr16 86804878 86805086 + 1.23214870625617 NA intron (NR_153789, intron 1 of 5) intron (NR_153789, intron 1 of 5) 1531 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-17 chr4 116668897 116669156 + 1.23214870625617 NA Intergenic Intergenic -16573 NM_011034 18477 Mm.30929 NM_011034 ENSMUSG00000028691 Prdx1 MSP23|NkefA|OSF-3|OSF3|PAG|Paga|PrdxI|PrxI|TDX2|TPxA|Tdpx2|prx1 peroxiredoxin 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-49 chr8 127334792 127334989 + 1.23214870625617 NA intron (NM_001013580, intron 3 of 13) intron (NM_001013580, intron 3 of 13) 35238 NM_001013580 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-27 chrX 140615810 140616000 + 1.23214870625617 NA Intergenic Intergenic -15383 NM_001077364 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-30 chr2 31277951 31278167 + 1.23214870625617 NA intron (NM_019681, intron 2 of 7) MIR3|SINE|MIR 32136 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-12 chr11 60545238 60545442 + 1.23214870625617 NA intron (NM_172943, intron 1 of 3) intron (NM_172943, intron 1 of 3) 7657 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-12 chr2 7013468 7013688 + 1.23214870625617 NA intron (NM_001110232, intron 2 of 15) intron (NM_001110232, intron 2 of 15) 67724 NM_001110230 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-10 chr18 12131096 12131344 + 1.23214870625617 NA intron (NM_024182, intron 1 of 12) intron (NM_024182, intron 1 of 12) 2370 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-50 chr9 71324971 71325171 + 1.23214870625617 NA Intergenic Intergenic 109282 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-4 chr1 161376185 161376397 + 1.23214870625617 NA Intergenic MIRb|SINE|MIR -19147 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-31 chr2 116942617 116942883 + 1.23214870625617 NA Intergenic Intergenic 42598 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-19 chr13 51103936 51104176 + 1.23214870625617 NA intron (NM_001283029, intron 1 of 5) intron (NM_001283029, intron 1 of 5) 2509 NM_001283029 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-16 chr12 102298432 102298629 + 1.23214870625617 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 14889 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-5 chr1 182489817 182490024 + 1.23214870625617 NA intron (NM_009794, intron 6 of 20) intron (NM_009794, intron 6 of 20) 27690 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-7 chr15 11652812 11653026 + 1.23214870625617 NA Intergenic Intergenic 252755 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-11 chr2 31767478 31767717 + 1.23214870625617 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 7424 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-8 chr17 34879477 34879668 + 1.23214870625617 NA intron (NM_013484, intron 3 of 17) B1F|SINE|Alu 2528 NM_013484 12263 Mm.283217 NM_013484 ENSMUSG00000024371 C2 - complement component 2 (within H-2S) protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-22 chr8 37041085 37041327 + 1.23214870625617 NA Intergenic Intergenic -16968 NR_126063 414128 Mm.450976 NR_126063 ENSMUSG00000110242 G630064G18Rik - RIKEN cDNA G630064G18 gene ncRNA unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-18 chr13 44971387 44971645 + 1.23214870625617 NA intron (NM_025772, intron 5 of 9) intron (NM_025772, intron 5 of 9) 30580 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-14 chr4 121212472 121212698 + 1.23214870625617 NA intron (NM_001346660, intron 1 of 7) B1_Mur1|SINE|Alu 2499 NM_001346660 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-21 chr8 34599647 34599892 + 1.23214870625617 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 40547 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-18 chr4 149885777 149885999 + 1.23214870625617 NA Intergenic Intergenic 69118 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-16 chr3 119510544 119510750 + 1.23214870625617 NA Intergenic Intergenic 272741 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-4 chr10 18081179 18081388 + 1.23214870625617 NA intron (NM_009048, intron 1 of 19) MTE2b|LTR|ERVL-MaLR 25343 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-35 chr3 122387223 122387427 + 1.23214870625617 NA Intergenic Intergenic -32432 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-5 chr13 74168622 74168837 + 1.23214870625617 NA Intergenic Intergenic 39971 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-27 chr17 72945075 72945268 + 1.23214870625617 NA Intergenic Intergenic 26866 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617 chr1 71681510 71681733 + 1.23214870625617 NA Intergenic Intergenic 28286 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-12 chr18 61042471 61042663 + 1.23214870625617 NA Intergenic Intergenic -2583 NM_001146268 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-26 chr9 108853374 108853638 + 1.23214870625617 NA promoter-TSS (NM_134420) promoter-TSS (NM_134420) -537 NM_134420 171429 Mm.45201 NM_134420 ENSMUSG00000023259 Slc26a6 B930010B04Rik|CFEX|Pat-1|Pat1 solute carrier family 26, member 6 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-4 chr1 149854643 149854872 + 1.23214870625617 NA intron (NM_008869, intron 14 of 17) B3A|SINE|B2 67682 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-15 chr3 4668545 4668763 + 1.23214870625617 NA Intergenic Intergenic -130054 NR_045272 100503859 Mm.75172 NR_045272 ENSMUSG00000098659 1110015O18Rik - RIKEN cDNA 1110015O18 gene ncRNA unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-9 chr18 54900181 54900381 + 1.23214870625617 NA exon (NM_175751, exon 4 of 10) exon (NM_175751, exon 4 of 10) 89899 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-9 chr17 56605142 56605353 + 1.23214870625617 NA intron (NM_001163300, intron 17 of 20) intron (NM_001163300, intron 17 of 20) 4524 NM_153152 224904 Mm.34002 NM_153152 ENSMUSG00000049760 2410015M20Rik Mic13|QIL1|sr104 RIKEN cDNA 2410015M20 gene protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-37 chr3 159032839 159033052 + 1.23214870625617 NA Intergenic Intergenic -43419 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-20 chr7 80398697 80398943 + 1.23214870625617 NA 5' UTR (NM_001081454, exon 2 of 16) 5' UTR (NM_001081454, exon 2 of 16) 3992 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-20 chr13 100511720 100511907 + 1.23214870625617 NA intron (NM_001360539, intron 3 of 6) intron (NM_001360539, intron 3 of 6) -19204 NM_022011 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-6 chr12 95563593 95563792 + 1.23214870625617 NA Intergenic Intergenic -128534 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-9 chr10 67504614 67504847 + 1.23214870625617 NA Intergenic Intergenic -33139 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-19 chr5 140506534 140506787 + 1.23214870625617 NA intron (NM_021528, intron 1 of 1) B1F|SINE|Alu 1051 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-36 chr3 144143918 144144124 + 1.23214870625617 NA Intergenic Intergenic 58311 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-9 chr17 56026355 56026558 + 1.23214870625617 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 10181 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617-51 chr9 99167147 99167408 + 1.23214870625617 NA Intergenic Intergenic -27066 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-19 chr5 39620315 39620520 + 1.23214870625617 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) -16843 NR_045416 75095 Mm.332354 NR_045416 ENSMUSG00000106741 4930513D17Rik - RIKEN cDNA 4930513D17 gene ncRNA unique_peak1_8_3_0.905821207819193_2.4529106039096_1.23214870625617 chr1 65186014 65186292 + 1.23214870625617 NA promoter-TSS (NM_011086) promoter-TSS (NM_011086) 326 NM_001111320 15926 Mm.9925 NM_010497 ENSMUSG00000025950 Idh1 AI314845|AI788952|E030024J03Rik|Id-1|Idh-1|Idpc isocitrate dehydrogenase 1 (NADP+), soluble protein-coding unique_peak2_3_7_-1.25584999663572_2.37207500168214_1.23214870625617-2 chr10 12931057 12931266 + 1.23214870625617 NA Intergenic Intergenic -8034 NR_038028 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA unique_peak2_2_7_-1.66795941483502_2.16602029258249_1.23214870625617-13 chr2 45019197 45019424 + 1.23214870625617 NA intron (NM_001355291, intron 3 of 9) intron (NM_001355291, intron 3 of 9) 3867 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-3 chr10 128037280 128037560 + 1.23214870625617 NA intron (NM_001282976, intron 2 of 7) B1_Mur3|SINE|Alu 2074 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding unique_peak1_7_3_0.73709502379104_2.36854751189552_1.23214870625617-23 chr7 110789693 110789898 + 1.23214870625617 NA intron (NM_009667, intron 3 of 14) intron (NM_009667, intron 3 of 14) 17191 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_253_167_0.298267219221912_7.54145103238972_1.23178134224162 chr5 139930570 139933110 + 1.23178134224162 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 23897 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_156_97_0.386707466909198_6.80806357756981_1.2314467837561 chr19 8967196 8968847 + 1.2314467837561 NA intron (NM_026007, intron 1 of 9) intron (NM_026007, intron 1 of 9) 980 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_39_52_-0.685278491164769_5.38528120898081_1.23110482636734 chr2 158028477 158028794 + 1.23110482636734 NA promoter-TSS (NM_029282) promoter-TSS (NM_029282) 138 NM_001291135 70470 Mm.290810 NM_027434 ENSMUSG00000027651 Rprd1b 2610304G08Rik|2810446G03Rik|Crept regulation of nuclear pre-mRNA domain containing 1B protein-coding common_peak1_39_52_-0.685278491164769_5.38528120898081_1.23110482636734-2 chr7 51340182 51340597 + 1.23110482636734 NA Intergenic Intergenic -170640 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak1_62_33_0.605907456996495_5.39041656974859_1.23110482636734-3 chr5 137600664 137601096 + 1.23110482636734 NA promoter-TSS (NM_001254762) promoter-TSS (NM_001254762) -172 NM_001254762 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak1_62_33_0.605907456996495_5.39041656974859_1.23110482636734 chr3 37361226 37361907 + 1.23110482636734 NA intron (NM_008006, intron 1 of 2) B1_Mus1|SINE|Alu 12913 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak2_39_52_-0.685278491164769_5.38528120898081_1.23110482636734 chr17 62880487 62881244 + 1.23110482636734 NA intron (NM_010109, intron 1 of 3) CpG 452 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak1_62_33_0.605907456996495_5.39041656974859_1.23110482636734-2 chr4 137449464 137450104 + 1.23110482636734 NA Intergenic Intergenic -3512 NM_027063 69380 Mm.272519 NM_027063 ENSMUSG00000041399 1700013G24Rik AI507018 RIKEN cDNA 1700013G24 gene protein-coding common_peak1_135_144_-0.384188191824971_6.98781499410245_1.23098238635563 chr1 152766641 152767909 + 1.23098238635563 NA promoter-TSS (NM_001346119) promoter-TSS (NM_001346119) 733 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding common_peak2_87_99_-0.471735766750909_6.40798830639927_1.2306483853552 chr3 105054195 105054970 + 1.2306483853552 NA Intergenic Intergenic -1436 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_87_99_-0.471735766750909_6.40798830639927_1.2306483853552 chr8 36608701 36609641 + 1.2306483853552 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 4772 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-4 chr11 6000240 6000627 + 1.23014042908325 NA intron (NM_001174054, intron 4 of 20) intron (NM_001174054, intron 4 of 20) 44675 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding unique_peak2_23_9_0.988947551557887_3.81640187066631_1.23014042908325 chr2 27699965 27700204 + 1.23014042908325 NA intron (NM_011305, intron 1 of 9) intron (NM_011305, intron 1 of 9) -9208 NM_001290481 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-3 chr8 119727813 119728041 + 1.23014042908325 NA intron (NM_026922, intron 6 of 26) intron (NM_026922, intron 6 of 26) 27918 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-6 chr16 18248961 18249189 + 1.23014042908325 NA promoter-TSS (NM_011239) promoter-TSS (NM_011239) 192 NM_001081000 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-2 chr11 69407910 69408431 + 1.23014042908325 NA intron (NM_001017426, intron 3 of 22) intron (NM_001017426, intron 3 of 22) 5505 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-9 chr8 109780286 109780842 + 1.23014042908325 NA intron (NM_001301211, intron 1 of 22) B3|SINE|B2 1981 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-10 chr15 98742442 98742835 + 1.23014042908325 NA exon (NM_007478, exon 2 of 5) exon (NM_007478, exon 2 of 5) -14440 NM_024169 66120 Mm.30729 NM_024169 ENSMUSG00000003355 Fkbp11 1110002O23Rik|FKBP-11 FK506 binding protein 11 protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-4 chr13 24105753 24106071 + 1.23014042908325 NA intron (NM_026825, intron 17 of 37) intron (NM_026825, intron 17 of 37) -114698 NM_145399 214189 Mm.255667 NM_145399 ENSMUSG00000021337 Scgn - secretagogin, EF-hand calcium binding protein protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-8 chr2 137432517 137432928 + 1.23014042908325 NA Intergenic Intergenic -316202 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-17 chr19 4432306 4432692 + 1.23014042908325 NA intron (NM_001329989, intron 2 of 4) intron (NM_001329989, intron 2 of 4) -6824 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak2_23_9_0.988947551557887_3.81640187066631_1.23014042908325 chr6 34865242 34865445 + 1.23014042908325 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 2197 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-8 chr5 151173121 151173523 + 1.23014042908325 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 16871 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-21 chr9 56393351 56393608 + 1.23014042908325 NA intron (NM_172924, intron 1 of 6) intron (NM_172924, intron 1 of 6) 24571 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-16 chr19 4191587 4191794 + 1.23014042908325 NA promoter-TSS (NM_031868) promoter-TSS (NM_031868) -484 NM_031868 19045 Mm.1970 NM_031868 ENSMUSG00000040385 Ppp1ca Ppp1c|dism2 protein phosphatase 1, catalytic subunit, alpha isoform protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-3 chr11 99082186 99082511 + 1.23014042908325 NA intron (NM_172564, intron 2 of 12) intron (NM_172564, intron 2 of 12) 6958 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-7 chr19 28297473 28297709 + 1.23014042908325 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -286425 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325 chr1 44580816 44581094 + 1.23014042908325 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 29284 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-23 chr9 97016085 97016482 + 1.23014042908325 NA intron (NM_145134, intron 1 of 2) intron (NM_145134, intron 1 of 2) 2072 NM_145134 211949 Mm.491271 NM_145134 ENSMUSG00000046997 Spsb4 D030068E18Rik|SSB-4|Ssb4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-14 chr18 43394108 43394584 + 1.23014042908325 NA promoter-TSS (NM_009468) promoter-TSS (NM_009468) -969 NM_009468 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325 chr10 86704304 86704691 + 1.23014042908325 NA intron (NM_011631, intron 1 of 17) intron (NM_011631, intron 1 of 17) 947 NM_011631 22027 Mm.87773 NM_011631 ENSMUSG00000020048 Hsp90b1 ERp99|GRP94|TA-3|Targ2|Tra-1|Tra1|endoplasmin|gp96 heat shock protein 90, beta (Grp94), member 1 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-12 chr16 50430103 50430330 + 1.23014042908325 NA intron (NM_027444, intron 1 of 16) CpG 2173 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325 chr10 88201270 88201483 + 1.23014042908325 NA intron (NM_026070, intron 1 of 6) intron (NM_026070, intron 1 of 6) 279 NM_027487 67282 Mm.208465 NM_026070 ENSMUSG00000020056 Washc3 2900091E11Rik|5730495F03Rik|Ccdc53 WASH complex subunit 3 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-19 chr7 16581582 16581967 + 1.23014042908325 NA intron (NM_172739, intron 1 of 6) intron (NM_172739, intron 1 of 6) -32050 NR_136928 102634559 Mm.421602 NR_136928 ENSMUSG00000100583 Gm29443 - predicted gene 29443 ncRNA unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-20 chr9 40730599 40731126 + 1.23014042908325 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) 44898 NM_133733 71566 Mm.280560 NM_133733 ENSMUSG00000032024 Clmp 9030425E11Rik|ACAM|ASP5|AW557819 CXADR-like membrane protein protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-22 chr9 75424339 75424634 + 1.23014042908325 NA Intergenic Intergenic 14302 NR_040719 71274 Mm.399152 NR_040719 ENSMUSG00000097021 4933433G15Rik 4921522K19Rik RIKEN cDNA 4933433G15 gene ncRNA unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-6 chr14 27114900 27115330 + 1.23014042908325 NA Intergenic CpG -28878 NM_001289686 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-9 chr3 37727200 37727543 + 1.23014042908325 NA Intergenic Intergenic -3011 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-11 chr15 99396359 99396750 + 1.23014042908325 NA intron (NM_001171036, intron 2 of 10) intron (NM_001171036, intron 2 of 10) 3335 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-2 chr6 5138686 5138973 + 1.23014042908325 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 55117 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding common_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325 chr18 37954720 37954990 + 1.23014042908325 NA promoter-TSS (NM_153793) promoter-TSS (NM_153793) 133 NM_010411 15183 Mm.20521 NM_010411 ENSMUSG00000024454 Hdac3 AW537363 histone deacetylase 3 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-18 chr2 70475054 70475370 + 1.23014042908325 NA 5' UTR (NM_022435, exon 1 of 2) 5' UTR (NM_022435, exon 1 of 2) 289 NM_022435 64406 Mm.423397 NM_022435 ENSMUSG00000075304 Sp5 - trans-acting transcription factor 5 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-3 chr11 117308167 117308525 + 1.23014042908325 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -23369 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-5 chr13 15587644 15587993 + 1.23014042908325 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 124095 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-2 chr5 124249169 124249433 + 1.23014042908325 NA intron (NM_011256, intron 1 of 24) CpG 459 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-3 chr10 93353501 93353825 + 1.23014042908325 NA Intergenic Intergenic 17452 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-5 chr15 103008296 103008570 + 1.23014042908325 NA Intergenic Intergenic -1129 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-4 chr12 76540781 76541418 + 1.23014042908325 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 6826 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-8 chr14 118704856 118705326 + 1.23014042908325 NA intron (NM_001163676, intron 1 of 29) intron (NM_001163676, intron 1 of 29) 1128 NM_001163676 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-10 chr5 111330267 111330571 + 1.23014042908325 NA promoter-TSS (NM_001301666) promoter-TSS (NM_001301666) -278 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-15 chr19 3811448 3811700 + 1.23014042908325 NA intron (NM_001167885, intron 12 of 12) intron (NM_001167885, intron 12 of 12) -40199 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-9 chr15 57749740 57750134 + 1.23014042908325 NA intron (NM_199449, intron 1 of 3) MIRc|SINE|MIR 55270 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-13 chr17 80800833 80801170 + 1.23014042908325 NA Intergenic Intergenic -72976 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-7 chr14 46656086 46656330 + 1.23014042908325 NA intron (NR_131909, intron 1 of 3) intron (NR_131909, intron 1 of 3) 17567 NR_131909 328385 Mm.271545 NR_131909 ENSMUSG00000115015 D330046F09Rik Gm808 RIKEN cDNA D330046F09 gene ncRNA unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-5 chr12 110203084 110203392 + 1.23014042908325 NA Intergenic Intergenic -45165 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak1_10_20_-1.19903206103521_3.79280139226115_1.23014042908325 chr12 111433324 111433538 + 1.23014042908325 NA Intergenic Intergenic -9230 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-2 chr1 189715540 189716035 + 1.23014042908325 NA Intergenic Intergenic -12481 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-7 chr2 172345827 172346095 + 1.23014042908325 NA intron (NM_025912, intron 1 of 2) intron (NM_025912, intron 1 of 2) 384 NM_025912 67017 Mm.30013 NM_025912 ENSMUSG00000027495 Fam210b 2010011I20Rik|AI430961|AV108736 family with sequence similarity 210, member B protein-coding common_peak1_23_9_0.988947551557887_3.81640187066631_1.23014042908325-2 chr11 76179844 76180098 + 1.23014042908325 NA promoter-TSS (NM_026664) promoter-TSS (NM_026664) -341 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak2_10_20_-1.19903206103521_3.79280139226115_1.23014042908325-6 chr15 100552200 100552566 + 1.23014042908325 NA promoter-TSS (NM_033476) promoter-TSS (NM_033476) -375 NM_001289603 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding common_peak2_94_106_-0.459701612675365_6.51161618006346_1.22987049200488 chr5 138116632 138117713 + 1.22987049200488 NA intron (NM_001044703, intron 1 of 3) intron (NM_001044703, intron 1 of 3) 267 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak1_104_61_0.47094030481314_6.18966646279345_1.22877789289096-3 chr8 123654051 123655157 + 1.22877789289096 NA intron (NM_133955, intron 1 of 2) intron (NM_133955, intron 1 of 2) 675 NM_133955 69581 Mm.168257 NM_133955 ENSMUSG00000039960 Rhou 2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K ras homolog family member U protein-coding common_peak1_104_61_0.47094030481314_6.18966646279345_1.22877789289096 chr15 38661962 38662890 + 1.22877789289096 NA intron (NM_025494, intron 1 of 12) intron (NM_025494, intron 1 of 12) 522 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding common_peak1_104_61_0.47094030481314_6.18966646279345_1.22877789289096-2 chr3 121371049 121371865 + 1.22877789289096 NA Intergenic Intergenic -55084 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_82_46_0.533734769213281_5.82145623628428_1.22876277037648 chr10 60828618 60829586 + 1.22876277037648 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 2479 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_82_46_0.533734769213281_5.82145623628428_1.22876277037648-3 chr18 77774053 77774555 + 1.22876277037648 NA promoter-TSS (NM_001357532) promoter-TSS (NM_001357532) -419 NM_001357531 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak2_55_68_-0.583880342559489_5.81658428549842_1.22876277037648-2 chr4 89507166 89508094 + 1.22876277037648 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -180568 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak1_82_46_0.533734769213281_5.82145623628428_1.22876277037648-4 chr19 18714271 18715260 + 1.22876277037648 NA intron (NM_177640, intron 1 of 1) intron (NM_177640, intron 1 of 1) 1529 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak2_82_46_0.533734769213281_5.82145623628428_1.22876277037648 chr18 32377900 32378722 + 1.22876277037648 NA promoter-TSS (NR_045403) promoter-TSS (NR_045403) -27 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_82_46_0.533734769213281_5.82145623628428_1.22876277037648-2 chr11 96292919 96294017 + 1.22876277037648 NA non-coding (NR_131758, exon 2 of 3) non-coding (NR_131758, exon 2 of 3) -5606 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_55_68_-0.583880342559489_5.81658428549842_1.22876277037648 chr12 73382850 73383669 + 1.22876277037648 NA intron (NR_046013, intron 2 of 3) intron (NR_046013, intron 2 of 3) 26304 NR_046013 380765 Mm.490476 NR_046013 ENSMUSG00000056359 D830013O20Rik Gm891 RIKEN cDNA D830013O20 gene ncRNA common_peak2_205_208_-0.3168267465959_7.54894575878293_1.22681167471977 chr2 164910583 164911820 + 1.22681167471977 NA intron (NM_199027, intron 1 of 27) CpG 549 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak1_97_56_0.493413149628069_6.07959658897878_1.22554633931855-2 chr14 8356396 8357725 + 1.22554633931855 NA intron (NM_146050, intron 6 of 9) intron (NM_146050, intron 6 of 9) -10380 NR_151471 102632156 NR_151471 2610318M16Rik - RIKEN cDNA 2610318M16 gene ncRNA common_peak1_67_80_-0.537074125121417_6.07131294032392_1.22554633931855 chr7 28981131 28981751 + 1.22554633931855 NA promoter-TSS (NM_001355054) promoter-TSS (NM_001355054) 447 NM_001285943 73830 Mm.29714 NM_028659 ENSMUSG00000053565 Eif3k 1200009C21Rik|Eif3s12 eukaryotic translation initiation factor 3, subunit K protein-coding common_peak2_67_80_-0.537074125121417_6.07131294032392_1.22554633931855 chr4 86674435 86674999 + 1.22554633931855 NA Intergenic Intergenic -4658 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_97_56_0.493413149628069_6.07959658897878_1.22554633931855 chr11 79214281 79215928 + 1.22554633931855 NA Intergenic Intergenic 27920 NM_001042565 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_61_74_-0.558369150943099_5.94963411502433_1.22525406874156 chr7 44985878 44986387 + 1.22525406874156 NA promoter-TSS (NR_045266) promoter-TSS (NR_045266) 288 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding common_peak1_89_51_0.503873449712247_5.95237644299722_1.22525406874155-2 chr3 57470676 57471625 + 1.22525406874155 NA intron (NM_133784, intron 4 of 6) intron (NM_133784, intron 4 of 6) 45740 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding common_peak1_89_51_0.503873449712247_5.95237644299722_1.22525406874155 chr11 78163545 78164757 + 1.22525406874155 NA intron (NM_009423, intron 1 of 6) intron (NM_009423, intron 1 of 6) 1399 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak1_231_151_0.312875548787193_7.40436528783718_1.22519675706253-2 chr5 29735309 29737410 + 1.22519675706253 NA promoter-TSS (NR_028426) promoter-TSS (NR_028426) -423 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak1_231_151_0.312875548787193_7.40436528783718_1.22519675706253 chr1 58710557 58711984 + 1.22519675706253 NA promoter-TSS (NM_001289704) promoter-TSS (NM_001289704) -221 NR_149257 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_177_112_0.361073284411495_7.00071560462094_1.22370504829607 chr7 34388195 34389600 + 1.22370504829607 NA intron (NM_025948, intron 1 of 10) CpG 808 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak2_81_93_-0.4836292840772_6.31277420963904_1.22255807342442 chr2 157367167 157368026 + 1.22255807342442 NA promoter-TSS (NM_026968) promoter-TSS (NM_026968) 2 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding common_peak1_113_67_0.455481235949017_6.31520345922485_1.2225580734244-2 chr19 4000351 4001091 + 1.2225580734244 NA exon (NM_025529, exon 1 of 4) exon (NM_025529, exon 1 of 4) 141 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000110949 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak1_113_67_0.455481235949017_6.31520345922485_1.2225580734244 chr11 113750118 113751574 + 1.2225580734244 NA 5' UTR (NM_020006, exon 1 of 2) 5' UTR (NM_020006, exon 1 of 2) 314 NM_020006 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding common_peak1_113_67_0.455481235949017_6.31520345922485_1.2225580734244-3 chr3 122088678 122089505 + 1.2225580734244 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 44631 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_113_67_0.455481235949017_6.31520345922485_1.2225580734244 chr6 108305682 108306763 + 1.2225580734244 NA intron (NM_010585, intron 4 of 61) intron (NM_010585, intron 4 of 61) 93126 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_138_85_0.400712296680989_6.62662090304259_1.22199866533739 chr7 81344283 81345671 + 1.22199866533739 NA exon (NM_009092, exon 2 of 5) exon (NM_009092, exon 2 of 5) 257 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding common_peak2_139_85_0.410981278697218_6.63175539405071_1.22199866533739 chr4 145245396 145246821 + 1.22199866533739 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 762 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_103_114_-0.434061835635751_6.6284591331265_1.22199866533737-2 chr8 64849057 64850579 + 1.22199866533737 NA 5' UTR (NM_178633, exon 1 of 15) 5' UTR (NM_178633, exon 1 of 15) 106 NM_178633 77113 Mm.350347 NM_178633 ENSMUSG00000031605 Klhl2 6030411N21Rik|8530402H02Rik|ABP-KELCH|AU020744|Mav kelch-like 2, Mayven protein-coding common_peak2_103_114_-0.434061835635751_6.6284591331265_1.22199866533737 chr11 6624967 6626525 + 1.22199866533737 NA intron (NM_134011, intron 1 of 11) CpG 321 NM_001130457 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding common_peak2_653_597_-0.178581145988691_9.13471110120376_1.22057414642536 chr19 5846772 5850188 + 1.22057414642536 NA Intergenic Intergenic -3000 NR_003513 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_30_43_-0.781927099511271_5.06846806888166_1.21996307277154-2 chr4 43729140 43729771 + 1.21996307277154 NA promoter-TSS (NM_001348108) promoter-TSS (NM_001348108) -579 NM_001348108 71406 Mm.33063 NM_027789 ENSMUSG00000028475 Spaar 5430416O09Rik|AI481365|Spar small regulatory polypeptide of amino acid response protein-coding common_peak2_31_43_-0.736446553992746_5.09120834164092_1.21996307277154-3 chr2 25332062 25332448 + 1.21996307277154 NA promoter-TSS (NM_001029983) promoter-TSS (NM_001029983) 316 NR_027448 100272219 Mm.382103 NR_027448 ENSMUSG00000097345 AA543186 - expressed sequence AA543186 ncRNA unique_peak2_31_43_-0.736446553992746_5.09120834164092_1.21996307277154 chr1 153191078 153191850 + 1.21996307277154 NA Intergenic Intergenic -5017 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_31_43_-0.736446553992746_5.09120834164092_1.21996307277154-2 chr13 5891077 5891742 + 1.21996307277154 NA Intergenic Intergenic 29920 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_30_43_-0.781927099511271_5.06846806888166_1.21996307277154 chr3 36863211 36863748 + 1.21996307277154 NA intron (NM_172679, intron 1 of 85) CpG 373 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding unique_peak1_31_43_-0.736446553992746_5.09120834164092_1.21996307277154 chr4 154293199 154293910 + 1.21996307277154 NA intron (NM_001112744, intron 1 of 14) intron (NM_001112744, intron 1 of 14) 6341 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding common_peak2_31_43_-0.736446553992746_5.09120834164092_1.21996307277154 chr12 16810955 16811517 + 1.21996307277154 NA non-coding (NR_027677, exon 1 of 8) non-coding (NR_027677, exon 1 of 8) 271 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding common_peak2_30_43_-0.781927099511271_5.06846806888166_1.21996307277154-3 chr8 31401224 31401728 + 1.21996307277154 NA Intergenic Intergenic 33727 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_31_43_-0.736446553992746_5.09120834164092_1.21996307277154 chr17 75464853 75465390 + 1.21996307277154 NA promoter-TSS (NM_207246) promoter-TSS (NM_207246) -417 NM_001360103 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak2_31_43_-0.736446553992746_5.09120834164092_1.21996307277154-4 chr8 112010692 112011222 + 1.21996307277154 NA promoter-TSS (NM_020584) promoter-TSS (NM_020584) 397 NM_001286384 85305 Mm.196544 NM_053092 ENSMUSG00000031948 Kars AA589550|AL024334|AL033315|AL033367|D8Ertd698e|D8Wsu108e|LysRS|mKIAA0070 lysyl-tRNA synthetase protein-coding unique_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153-2 chr6 34877483 34878045 + 1.21996307277153 NA 5' UTR (NM_199145, exon 1 of 4) 5' UTR (NM_199145, exon 1 of 4) 301 NM_199145 78412 Mm.248440 NM_199145 ENSMUSG00000046806 3110062M04Rik AL023049|Cyren|Mri RIKEN cDNA 3110062M04 gene protein-coding common_peak2_51_26_0.663595692718401_5.08668534852267_1.21996307277153 chr10 34019038 34019435 + 1.21996307277153 NA intron (NM_025614, intron 1 of 6) CpG 380 NM_025614 66521 Mm.28528 NM_025614 ENSMUSG00000019782 Rwdd1 0710001K08Rik|2610002D06Rik|2700069A07Rik|IH1 RWD domain containing 1 protein-coding common_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153-4 chr7 87246482 87247252 + 1.21996307277153 NA exon (NM_015760, exon 1 of 18) exon (NM_015760, exon 1 of 18) 218 NM_001285833 50490 Mm.31748 NM_015760 ENSMUSG00000030562 Nox4 AI648021 NADPH oxidase 4 protein-coding common_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153-3 chr5 92823435 92824125 + 1.21996307277153 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 14398 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_51_26_0.663595692718401_5.08668534852267_1.21996307277153-2 chr14 52315689 52316214 + 1.21996307277153 NA intron (NM_015772, intron 1 of 1) intron (NM_015772, intron 1 of 1) 372 NM_001244916 50524 Mm.39487 NM_015772 ENSMUSG00000049532 Sall2 AI225809|AW559097|Msal-2|Sal-2|mKIAA0360|p150(Sal2) spalt like transcription factor 2 protein-coding common_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153 chr12 79976218 79976648 + 1.21996307277153 NA Intergenic Intergenic -40169 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153-2 chr3 106721896 106722353 + 1.21996307277153 NA intron (NM_028081, intron 1 of 2) CpG 442 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding common_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153-5 chr8 115708075 115708706 + 1.21996307277153 NA Intergenic Intergenic -1496 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak1_51_26_0.663595692718401_5.08668534852267_1.21996307277153 chr15 32245622 32246365 + 1.21996307277153 NA intron (NM_009154, intron 1 of 22) CpG 1180 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding common_peak2_96_107_-0.44327694775239_6.53324902828727_1.21980598889429 chr6 83914406 83915139 + 1.21980598889429 NA intron (NM_008717, intron 1 of 26) CpG 419 NM_001355284 18139 Mm.132392 NM_008717 ENSMUSG00000030016 Zfp638 AI323587|Np220|Zfml|Znf638|mNP220 zinc finger protein 638 protein-coding common_peak2_95_107_-0.458121814864706_6.52582659473112_1.21980598889429 chr1 153128895 153130160 + 1.21980598889429 NA intron (NM_008485, intron 20 of 23) intron (NM_008485, intron 20 of 23) 56920 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_95_107_-0.458121814864706_6.52582659473112_1.21980598889429-2 chr5 29434670 29435607 + 1.21980598889429 NA exon (NM_001033457, exon 1 of 11) exon (NM_001033457, exon 1 of 11) 471 NM_001033457 433864 Mm.262815 NM_001033457 ENSMUSG00000001569 Nom1 D5Kng1|Gm1040 nucleolar protein with MIF4G domain 1 protein-coding common_peak1_232_152_0.309576591861675_7.41217613862349_1.21976979019034 chr4 48584433 48586634 + 1.21976979019034 NA exon (NM_001356272, exon 1 of 10) exon (NM_001356272, exon 1 of 10) 359 NM_021436 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding common_peak1_50_63_-0.609333540436094_5.69533322978195_1.219227950326 chr7 139363347 139364052 + 1.219227950326 NA Intergenic Intergenic -25410 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak1_76_42_0.554569697469091_5.70354960343664_1.219227950326 chr15 41726826 41727477 + 1.219227950326 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -61844 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_50_63_-0.609333540436094_5.69533322978195_1.219227950326 chr1 9943162 9943952 + 1.219227950326 NA intron (NR_024067, intron 1 of 3) intron (NR_024067, intron 1 of 3) 561 NR_024067 73824 Mm.28311 NR_024067 ENSMUSG00000098234 Snhg6 1110008H02Rik small nucleolar RNA host gene 6 ncRNA unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-49 chr6 82913030 82913312 + 1.21878474469819 NA 3' UTR (NM_011350, exon 14 of 14) 3' UTR (NM_011350, exon 14 of 14) 26598 NM_001308374 20355 Mm.270543 NM_011350 ENSMUSG00000000627 Sema4f Sema W sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-12 chr10 99309310 99309508 + 1.21878474469819 NA Intergenic L2b|LINE|L2 46178 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_4_8_-1.10611809932415_2.61686595178024_1.21878474469819 chr5 36135929 36136120 + 1.21878474469819 NA intron (NM_030889, intron 3 of 26) intron (NM_030889, intron 3 of 26) -67997 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-42 chr4 43421637 43421828 + 1.21878474469819 NA exon (NM_199057, exon 3 of 12) exon (NM_199057, exon 3 of 12) 7402 NM_177377 329831 Mm.454466 NM_177377 ENSMUSG00000042788 Fam166b 4833436C18Rik family with sequence similarity 166, member B protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-46 chr4 137199224 137199457 + 1.21878474469819 NA Intergenic Intergenic -34274 NR_040443 100503595 Mm.421314 NR_040443 ENSMUSG00000085833 Gm13003 - predicted gene 13003 ncRNA unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-18 chr3 138761227 138761429 + 1.21878474469819 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 19120 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-30 chr15 69160218 69160488 + 1.21878474469819 NA Intergenic Intergenic -110180 NR_130983 75076 NR_130983 ENSMUSG00000116167 4930504C09Rik - RIKEN cDNA 4930504C09 gene ncRNA common_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819 chr17 12288727 12288926 + 1.21878474469819 NA intron (NM_001357722, intron 1 of 25) intron (NM_001357722, intron 1 of 25) 29834 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-23 chr13 45922127 45922319 + 1.21878474469819 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 42768 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-22 chr6 38919970 38920215 + 1.21878474469819 NA intron (NM_011539, intron 1 of 12) AmnSINE1|SINE|Deu 1106 NM_011539 21391 Mm.4054 NM_011539 ENSMUSG00000029925 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-15 chr11 88716647 88716876 + 1.21878474469819 NA intron (NM_054043, intron 3 of 13) intron (NM_054043, intron 3 of 13) 1468 NM_054043 76626 Mm.400451 NM_054043 ENSMUSG00000069769 Msi2 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h musashi RNA-binding protein 2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-29 chr15 36620961 36621224 + 1.21878474469819 NA Intergenic Intergenic -12119 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-41 chr3 145838231 145838427 + 1.21878474469819 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 79637 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-6 chr1 137901423 137901669 + 1.21878474469819 NA Intergenic Intergenic -64909 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-11 chr14 54615160 54615414 + 1.21878474469819 NA intron (NM_011186, intron 2 of 2) intron (NM_011186, intron 2 of 2) 1498 NR_030457 751525 NR_030457 ENSMUSG00000076128 Mir686 Mirn686|mmu-mir-686 microRNA 686 ncRNA unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-17 chr3 121552927 121553127 + 1.21878474469819 NA Intergenic Intergenic -20683 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-31 chr17 24632140 24632332 + 1.21878474469819 NA promoter-TSS (NM_008743) promoter-TSS (NM_008743) 391 NM_011647 22084 Mm.30435 NM_011647 ENSMUSG00000002496 Tsc2 Nafld|Tcs2 tuberous sclerosis 2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-55 chr9 92536040 92536262 + 1.21878474469819 NA Intergenic Intergenic -6072 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-35 chr19 12012824 12013014 + 1.21878474469819 NA Intergenic Intergenic 23821 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-26 chr14 21742144 21742416 + 1.21878474469819 NA intron (NM_001007268, intron 5 of 7) intron (NM_001007268, intron 5 of 7) 599 NM_013849 27389 Mm.390674 NM_013849 ENSMUSG00000021768 Dusp13 DUSP13A|DUSP13B|Gm1203|LMW-DSP6|MDSP|TMDP|TS-DSP6 dual specificity phosphatase 13 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-12 chr16 4615099 4615329 + 1.21878474469819 NA 3' UTR (NM_031184, exon 7 of 7) 3' UTR (NM_031184, exon 7 of 7) 9732 NM_025571 66449 Mm.354760 NM_025571 ENSMUSG00000014301 Pam16 2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-22 chr13 36029632 36029886 + 1.21878474469819 NA intron (NM_201358, intron 2 of 2) intron (NM_201358, intron 2 of 2) 61853 NM_029628 76487 Mm.44745 NM_029628 ENSMUSG00000050423 Ppp1r3g 1600032L17Rik protein phosphatase 1, regulatory (inhibitor) subunit 3G protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-38 chr2 148857929 148858215 + 1.21878474469819 NA Intergenic B3|SINE|B2 -7138 NM_029960 77705 Mm.159975 NM_029960 ENSMUSG00000027446 9230104L09Rik mCST E2 RIKEN cDNA 9230104L09 gene protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-9 chr14 13025282 13025509 + 1.21878474469819 NA Intergenic Intergenic -202316 NM_001359919 27062 Mm.260881 NM_012061 ENSMUSG00000054423 Cadps AU067781|CAPS|CAPS1|mKIAA1121 Ca2+-dependent secretion activator protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-36 chr2 53028498 53028697 + 1.21878474469819 NA intron (NM_172409, intron 2 of 26) intron (NM_172409, intron 2 of 26) 162590 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-28 chr15 27818040 27818231 + 1.21878474469819 NA exon (NM_001081302, exon 33 of 57) exon (NM_001081302, exon 33 of 57) -136593 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-40 chr3 9704753 9704947 + 1.21878474469819 NA intron (NM_053182, intron 3 of 7) intron (NM_053182, intron 3 of 7) -94765 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-5 chr1 134073430 134073647 + 1.21878474469819 NA Intergenic Intergenic 5617 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-16 chr2 117960715 117960933 + 1.21878474469819 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 138896 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-52 chr8 74557702 74557891 + 1.21878474469819 NA Intergenic Intergenic -315378 NM_027837 71597 Mm.158735 NM_027837 ENSMUSG00000031621 Isx 9130012O13Rik|Pix-1 intestine specific homeobox protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-25 chr13 70789453 70789709 + 1.21878474469819 NA intron (NM_172053, intron 8 of 22) intron (NM_172053, intron 8 of 22) 52230 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-15 chr19 43689170 43689392 + 1.21878474469819 NA promoter-TSS (NM_053103) promoter-TSS (NM_053103) -408 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-21 chr13 34149199 34149411 + 1.21878474469819 NA Intergenic Intergenic -13659 NM_001101430 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-20 chr12 54863040 54863272 + 1.21878474469819 NA promoter-TSS (NM_007688) promoter-TSS (NM_007688) -279 NM_007688 12632 Mm.276826 NM_007688 ENSMUSG00000062929 Cfl2 - cofilin 2, muscle protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819 chr1 21960969 21961212 + 1.21878474469819 NA intron (NM_023872, intron 1 of 13) CpG 852 NM_001160139 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-53 chr8 95148084 95148284 + 1.21878474469819 NA Intergenic Intergenic -5644 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-13 chr11 20113839 20114031 + 1.21878474469819 NA promoter-TSS (NM_146243) promoter-TSS (NM_146243) -984 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-27 chr14 24216059 24216365 + 1.21878474469819 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 29708 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-4 chr1 131513692 131513908 + 1.21878474469819 NA intron (NM_001081011, intron 2 of 22) ID_B1|SINE|B4 13561 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-2 chr5 90339200 90339401 + 1.21878474469819 NA intron (NM_198010, intron 1 of 32) intron (NM_198010, intron 1 of 32) 26885 NM_030886 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-8 chr12 84185816 84186066 + 1.21878474469819 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 8074 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-3 chr1 75124244 75124464 + 1.21878474469819 NA Intergenic PB1D10|SINE|Alu 9536 NM_194333 22626 Mm.68157 NM_194333 ENSMUSG00000026205 Slc23a3 SVCT3|Yspl1 solute carrier family 23 (nucleobase transporters), member 3 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-3 chr10 40038653 40038864 + 1.21878474469819 NA intron (NM_001114332, intron 5 of 5) intron (NM_001114332, intron 5 of 5) -13490 NM_144821 215929 Mm.55513 NM_144821 ENSMUSG00000038522 Mfsd4b1 AI317395|AI482555|Naglt1a major facilitator superfamily domain containing 4B1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-8 chr1 164794349 164794634 + 1.21878474469819 NA Intergenic MER5A|DNA|hAT-Charlie -2172 NM_019759 56429 Mm.28935 NM_019759 ENSMUSG00000026574 Dpt 1810032B19Rik|5033416F05Rik|EQ-1|Eq1 dermatopontin protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-20 chr5 142920620 142920823 + 1.21878474469819 NA Intergenic Intergenic -13967 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-54 chr9 73164983 73165222 + 1.21878474469819 NA Intergenic Intergenic 51633 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-23 chr7 80843211 80843491 + 1.21878474469819 NA Intergenic Intergenic -18757 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-24 chr13 70687160 70687354 + 1.21878474469819 NA Intergenic Intergenic -49623 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-47 chr5 21784445 21784638 + 1.21878474469819 NA promoter-TSS (NM_011188) promoter-TSS (NM_011188) 624 NM_009584 22791 Mm.266312 NM_009584 ENSMUSG00000029014 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ heat shock protein family (Hsp40) member C2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-7 chr1 153154198 153154496 + 1.21878474469819 NA intron (NM_008485, intron 5 of 23) intron (NM_008485, intron 5 of 23) 32100 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-10 chr14 16511962 16512181 + 1.21878474469819 NA intron (NM_001289760, intron 4 of 9) intron (NM_001289760, intron 4 of 9) 63405 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-50 chr6 145867226 145867448 + 1.21878474469819 NA Intergenic Intergenic -1917 NM_001271768 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-17 chr11 94916276 94916525 + 1.21878474469819 NA Intergenic MIRb|SINE|MIR -19824 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-34 chr17 74717345 74717596 + 1.21878474469819 NA promoter-TSS (NM_152817) promoter-TSS (NM_152817) -280 NM_152817 74196 Mm.209503 NM_152817 ENSMUSG00000024078 Ttc27 2610511O17Rik tetratricopeptide repeat domain 27 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-13 chr16 24517481 24517713 + 1.21878474469819 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -11717 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-2 chr1 31154347 31154545 + 1.21878474469819 NA intron (NR_033445, intron 2 of 2) intron (NR_033445, intron 2 of 2) -21989 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-7 chr11 117078054 117078337 + 1.21878474469819 NA TTS (NR_105853) TTS (NR_105853) 847 NR_105853 102465258 NR_105853 ENSMUSG00000104740 Mir6516 mmu-mir-6516 microRNA 6516 ncRNA unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-16 chr11 94379800 94380006 + 1.21878474469819 NA intron (NM_029600, intron 1 of 30) intron (NM_029600, intron 1 of 30) 13073 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-6 chr11 52258422 52258624 + 1.21878474469819 NA intron (NM_009331, intron 5 of 9) intron (NM_009331, intron 5 of 9) 24072 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-11 chr10 96769498 96769794 + 1.21878474469819 NA Intergenic Intergenic 152645 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-56 chr9 92551147 92551357 + 1.21878474469819 NA intron (NM_011961, intron 1 of 18) intron (NM_011961, intron 1 of 18) -8383 NR_029474 78575 Mm.407669 NR_029474 ENSMUSG00000103622 B430319G15Rik D530025C14Rik RIKEN cDNA B430319G15 gene ncRNA unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-5 chr10 96714589 96714789 + 1.21878474469819 NA Intergenic Intergenic 97688 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-45 chr4 117256807 117257017 + 1.21878474469819 NA intron (NM_029589, intron 2 of 3) intron (NM_029589, intron 2 of 3) 4572 NM_029589 68777 Mm.331805 NM_026837 ENSMUSG00000048772 Tmem53 1110038M16Rik|1500001P22Rik|1700012A05Rik transmembrane protein 53 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-51 chr7 92479916 92480104 + 1.21878474469819 NA Intergenic Intergenic -81139 NM_025515 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-25 chr9 83962863 83963110 + 1.21878474469819 NA intron (NM_199195, intron 3 of 10) intron (NM_199195, intron 3 of 10) 14205 NM_199195 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-14 chr11 51035841 51036068 + 1.21878474469819 NA Intergenic Intergenic 8950 NM_010997 18354 Mm.222843 NM_010997 ENSMUSG00000059397 Olfr54 F3|MOR126-1 olfactory receptor 54 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-10 chr10 45578274 45578461 + 1.21878474469819 NA intron (NM_172473, intron 1 of 23) CpG 538 NM_172473 209462 Mm.458633 NM_172473 ENSMUSG00000038822 Hace1 1700042J16Rik|A730034A22Rik|BC025474 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-9 chr1 189774919 189775219 + 1.21878474469819 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 46801 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-21 chr6 37466659 37466945 + 1.21878474469819 NA Intergenic RSINE1|SINE|B4 -24654 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-19 chr12 10514282 10514503 + 1.21878474469819 NA intron (NR_110487, intron 10 of 11) intron (NR_110487, intron 10 of 11) 68004 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-57 chr9 123136974 123137176 + 1.21878474469819 NA TTS (NM_001081188) TTS (NM_001081188) -13871 NM_011606 21922 Mm.34588 NM_011606 ENSMUSG00000025784 Clec3b Tna C-type lectin domain family 3, member b protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-44 chr4 100273659 100273847 + 1.21878474469819 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 177962 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-32 chr17 26515484 26515679 + 1.21878474469819 NA Intergenic Intergenic -7109 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-48 chr5 125136659 125136853 + 1.21878474469819 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 42458 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-4 chr10 95124999 95125277 + 1.21878474469819 NA intron (NR_131146, intron 3 of 3) intron (NR_131146, intron 3 of 3) 20687 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-39 chr2 154792732 154792970 + 1.21878474469819 NA intron (NM_001139513, intron 1 of 8) intron (NM_001139513, intron 1 of 8) 1741 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-24 chr8 11317510 11317736 + 1.21878474469819 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -4797 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-37 chr2 71640649 71640873 + 1.21878474469819 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -78656 NR_037979 381371 Mm.330284 NM_201366 ENSMUSG00000064263 Platr26 Gm1631 pluripotency associated transcript 26 ncRNA unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819 chr1 71004591 71004828 + 1.21878474469819 NA Intergenic Intergenic 98263 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 - BRCA1 associated RING domain 1 protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-43 chr4 55530806 55531008 + 1.21878474469819 NA exon (NM_010637, exon 3 of 5) exon (NM_010637, exon 3 of 5) 1568 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-33 chr17 28981961 28982173 + 1.21878474469819 NA exon (NM_134115, exon 7 of 14) exon (NM_134115, exon 7 of 14) 25928 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-19 chr5 16469759 16469976 + 1.21878474469819 NA Intergenic Intergenic -83628 NM_001289460 15234 Mm.267078 NM_010427 ENSMUSG00000028864 Hgf C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF hepatocyte growth factor protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-2 chr1 186555545 186555834 + 1.21878474469819 NA intron (NR_131124, intron 1 of 2) intron (NR_131124, intron 1 of 2) 2992 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819-18 chr11 98294780 98294976 + 1.21878474469819 NA Intergenic CpG 32272 NR_039579 100628613 NR_039579 ENSMUSG00000093176 Mir5119 mmu-mir-5119|mu-mir-5119 microRNA 5119 ncRNA common_peak1_9_4_0.734823827657556_2.68934000871614_1.21878474469819 chr17 15499546 15499733 + 1.21878474469819 NA promoter-TSS (NM_013684) promoter-TSS (NM_013684) -249 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding unique_peak2_4_8_-1.10611809932415_2.61686595178024_1.21878474469819-14 chr19 12634821 12635048 + 1.21878474469819 NA intron (NM_145935, intron 1 of 5) intron (NM_145935, intron 1 of 5) 1626 NM_145935 107146 Mm.39974 NM_145935 ENSMUSG00000063683 Glyat A330009E03Rik|ACGNAT|AI195249|AI315345|CAT|GAT glycine-N-acyltransferase protein-coding common_peak2_196_200_-0.324513329104253_7.4887950266268_1.21772371634275 chr8 22476312 22478224 + 1.21772371634275 NA promoter-TSS (NM_001012667) promoter-TSS (NM_001012667) -389 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_111_122_-0.424925370693804_6.73005181999234_1.21728102913953 chr1 64121805 64122568 + 1.21728102913953 NA promoter-TSS (NM_033563) promoter-TSS (NM_033563) -797 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak2_149_92_0.396920673698488_6.73761914795728_1.21728102913951 chr3 98373501 98375009 + 1.21728102913951 NA Intergenic Intergenic -8226 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_210_136_0.32685487119811_7.26145951855958_1.21683238448138 chr3 95105346 95106768 + 1.21683238448138 NA intron (NM_001293707, intron 1 of 14) intron (NM_001293707, intron 1 of 14) 873 NM_008847 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-9 chr9 111119501 111119713 + 1.21681515183528 NA intron (NM_027742, intron 1 of 13) intron (NM_027742, intron 1 of 13) 1496 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-21 chr17 6816598 6816806 + 1.21681515183528 NA Intergenic Intergenic -33922 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-8 chr6 72519799 72520042 + 1.21681515183528 NA Intergenic Intergenic -24471 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-41 chr6 73209829 73210058 + 1.21681515183528 NA intron (NM_001164669, intron 2 of 76) intron (NM_001164669, intron 2 of 76) 11688 NM_001164669 330355 Mm.333166 NM_001164669 ENSMUSG00000052861 Dnah6 9830168K20|A730004I20Rik|Dnahc6|mKIAA1697|mdhc6 dynein, axonemal, heavy chain 6 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-2 chr1 39933960 39934183 + 1.21681515183528 NA intron (NM_001252202, intron 2 of 29) intron (NM_001252202, intron 2 of 29) 33158 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-4 chr10 78409670 78410051 + 1.21681515183528 NA intron (NM_010925, intron 3 of 12) intron (NM_010925, intron 3 of 12) -1315 NR_105872 102465547 NR_105872 ENSMUSG00000098376 Mir6907 Gm27351|mmu-mir-6907 microRNA 6907 ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-40 chr7 28916337 28916581 + 1.21681515183528 NA intron (NM_021895, intron 3 of 20) intron (NM_021895, intron 3 of 20) 34803 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-21 chr11 116412047 116412267 + 1.21681515183528 NA intron (NM_027258, intron 1 of 18) intron (NM_027258, intron 1 of 18) 875 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-46 chr2 163676045 163676330 + 1.21681515183528 NA intron (NM_001039390, intron 2 of 4) ID4_|SINE|ID 17729 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-7 chr12 4841375 4841574 + 1.21681515183528 NA 5' UTR (NM_016863, exon 1 of 4) 5' UTR (NM_016863, exon 1 of 4) 121 NM_016863 14226 Mm.20453 NM_016863 ENSMUSG00000020635 Fkbp1b 12.6kDa|AW494148|FKBP12.6|calstabin2 FK506 binding protein 1b protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-31 chr3 130052204 130052485 + 1.21681515183528 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 8563 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-29 chr4 138434269 138434514 + 1.21681515183528 NA promoter-TSS (NM_026689) promoter-TSS (NM_026689) -281 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-65 chr7 99361093 99361301 + 1.21681515183528 NA Intergenic Intergenic -7958 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-49 chr8 127439838 127440062 + 1.21681515183528 NA intron (NM_033620, intron 20 of 24) ID2|SINE|ID 140298 NM_001013580 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak1_8_11_-0.679141292901963_3.24539185427017_1.21681515183528 chr14 31781485 31781681 + 1.21681515183528 NA intron (NM_001024604, intron 1 of 27) intron (NM_001024604, intron 1 of 27) 48832 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-34 chr15 80055273 80055466 + 1.21681515183528 NA Intergenic Intergenic 23210 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-4 chr17 27800032 27800230 + 1.21681515183528 NA intron (NM_001033279, intron 1 of 4) intron (NM_001033279, intron 1 of 4) 20411 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-38 chr5 36384553 36384948 + 1.21681515183528 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 13389 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-7 chr4 137489725 137490040 + 1.21681515183528 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 21079 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-41 chr19 12597003 12597209 + 1.21681515183528 NA promoter-TSS (NR_015503) promoter-TSS (NR_015503) -540 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-38 chr6 146896385 146896611 + 1.21681515183528 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 8004 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_7_11_-0.847867476930116_3.1610287622561_1.21681515183528 chr18 64477213 64477404 + 1.21681515183528 NA intron (NM_007998, intron 3 of 10) B1_Mur4|SINE|Alu 11790 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-16 chr10 121429504 121429770 + 1.21681515183528 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 46613 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-52 chr3 144688458 144688725 + 1.21681515183528 NA 3' UTR (NM_019464, exon 9 of 9) 3' UTR (NM_019464, exon 9 of 9) 31744 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-49 chr8 44759351 44759582 + 1.21681515183528 NA Intergenic Intergenic -190742 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-32 chr4 43668831 43669070 + 1.21681515183528 NA promoter-TSS (NM_175517) promoter-TSS (NM_175517) -21 NM_001085508 242409 Mm.171489 NM_001085508 ENSMUSG00000078716 Tmem8b 4930500O05Rik transmembrane protein 8B protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-3 chr13 95518966 95519178 + 1.21681515183528 NA intron (NM_007974, intron 1 of 1) intron (NM_007974, intron 1 of 1) 6168 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-45 chr2 84521258 84521474 + 1.21681515183528 NA Intergenic Intergenic -14493 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-69 chr9 99700384 99700658 + 1.21681515183528 NA intron (NM_001194921, intron 1 of 4) intron (NM_001194921, intron 1 of 4) 9542 NM_019815 56492 Mm.386784 NM_019815 ENSMUSG00000032473 Cldn18 - claudin 18 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-5 chr10 116298433 116298694 + 1.21681515183528 NA Intergenic Intergenic -2811 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-48 chr8 25808960 25809215 + 1.21681515183528 NA intron (NM_011485, intron 1 of 6) intron (NM_011485, intron 1 of 6) 613 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-39 chr5 64343082 64343314 + 1.21681515183528 NA intron (NM_001289514, intron 17 of 18) intron (NM_001289514, intron 17 of 18) 112841 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-29 chr13 46238540 46238753 + 1.21681515183528 NA Intergenic Intergenic -35075 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-33 chr14 120374517 120374808 + 1.21681515183528 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 68210 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-24 chr18 39461457 39461752 + 1.21681515183528 NA intron (NM_008173, intron 1 of 7) intron (NM_008173, intron 1 of 7) 25641 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-17 chr2 69375719 69376048 + 1.21681515183528 NA Intergenic Intergenic -4579 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-13 chr10 72778993 72779262 + 1.21681515183528 NA Intergenic Intergenic 124281 NM_001293683 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-53 chr4 41026212 41026408 + 1.21681515183528 NA TTS (NM_023739) TTS (NM_023739) 21826 NM_007473 11832 Mm.8728 NM_007473 ENSMUSG00000028427 Aqp7 AQP7L|AQPap aquaporin 7 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-24 chr3 132865439 132865647 + 1.21681515183528 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 13053 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-41 chr7 29170345 29170586 + 1.21681515183528 NA intron (NM_182696, intron 1 of 2) intron (NM_182696, intron 1 of 2) 255 NM_182694 243897 Mm.389886 NM_182694 ENSMUSG00000031493 Ggn AI593290 gametogenetin protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-7 chr1 155245760 155245947 + 1.21681515183528 NA Intergenic Intergenic 87150 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-4 chr2 32536048 32536281 + 1.21681515183528 NA exon (NM_153560, exon 1 of 11) exon (NM_153560, exon 1 of 11) 805 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-8 chr12 28122453 28122755 + 1.21681515183528 NA Intergenic Intergenic 425733 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-51 chr9 88267251 88267540 + 1.21681515183528 NA Intergenic Intergenic -60214 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-44 chr2 45108753 45108976 + 1.21681515183528 NA intron (NR_149354, intron 2 of 2) intron (NR_149354, intron 2 of 2) 1413 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-12 chr18 82504703 82505002 + 1.21681515183528 NA intron (NM_001025245, intron 2 of 3) (CAAAA)n|Simple_repeat|Simple_repeat 29729 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-42 chr6 113099497 113099714 + 1.21681515183528 NA intron (NM_028385, intron 1 of 21) intron (NM_028385, intron 1 of 21) -5330 NM_173005 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-16 chr2 31951670 31951896 + 1.21681515183528 NA intron (NM_145144, intron 2 of 5) intron (NM_145144, intron 2 of 5) 1480 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-50 chr9 63681627 63681879 + 1.21681515183528 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 76241 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-58 chr6 31114266 31114513 + 1.21681515183528 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -51296 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-50 chr3 101076920 101077127 + 1.21681515183528 NA intron (NM_011197, intron 3 of 8) intron (NM_011197, intron 3 of 8) 33143 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-48 chr3 31018886 31019116 + 1.21681515183528 NA intron (NM_008857, intron 2 of 17) B2_Mm2|SINE|B2 -19965 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-14 chr10 108582460 108582649 + 1.21681515183528 NA intron (NM_001358501, intron 9 of 10) intron (NM_001358501, intron 9 of 10) 117606 NM_203660 368203 Mm.452758 NM_203660 ENSMUSG00000112039 Gm5136 C6.1AL|EG368203 predicted gene 5136 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-5 chr11 73037198 73037415 + 1.21681515183528 NA intron (NM_018883, intron 12 of 15) intron (NM_018883, intron 12 of 15) -10561 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding common_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-3 chr13 110725322 110725530 + 1.21681515183528 NA Intergenic Intergenic -178073 NR_131193 75139 Mm.490931 NR_131193 ENSMUSG00000114472 Gm38397 - predicted gene, 38397 ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-53 chr9 108241886 108242175 + 1.21681515183528 NA intron (NM_001276485, intron 1 of 2) intron (NM_001276485, intron 1 of 2) 21785 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-36 chr5 120907173 120907448 + 1.21681515183528 NA exon (NM_145211, exon 1 of 7) exon (NM_145211, exon 1 of 7) 215 NM_145211 246730 Mm.14301 NM_145211 ENSMUSG00000052776 Oas1a L3 2'-5' oligoadenylate synthetase 1A protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-36 chr15 97183979 97184201 + 1.21681515183528 NA Intergenic Intergenic -16846 NR_155279 102635594 Mm.392594 NR_155278 ENSMUSG00000116295 Gm32885 - predicted gene, 32885 ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-7 chr11 30268334 30268614 + 1.21681515183528 NA Intergenic CpG -48702 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528 chr11 82780345 82780534 + 1.21681515183528 NA promoter-TSS (NM_001291247) promoter-TSS (NM_001291247) 603 NR_126068 100503272 Mm.486964 NR_126067 ENSMUSG00000085175 Gm11423 - predicted gene 11423 ncRNA unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-13 chr14 34378849 34379135 + 1.21681515183528 NA intron (NM_153127, intron 1 of 6) intron (NM_153127, intron 1 of 6) 3488 NM_153127 105450 Mm.272673 NM_153127 ENSMUSG00000041445 Mmrn2 AA986839|ENDOGLYX1|Emilin3|EndoGlyx-1 multimerin 2 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-9 chr10 8505885 8506092 + 1.21681515183528 NA intron (NM_177387, intron 1 of 7) intron (NM_177387, intron 1 of 7) 12837 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak2_12_7_0.432593154028358_3.21629657701418_1.21681515183528 chr14 54145514 54145716 + 1.21681515183528 NA Intergenic Intergenic 108314 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-52 chrX 13063317 13063717 + 1.21681515183528 NA Intergenic Intergenic -7981 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-59 chr6 50414465 50414654 + 1.21681515183528 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -31722 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-22 chr3 82503649 82503907 + 1.21681515183528 NA Intergenic Intergenic 44307 NM_001205099 18167 Mm.1433 NM_008731 ENSMUSG00000028004 Npy2r NPY2-R neuropeptide Y receptor Y2 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-42 chr7 48749478 48749699 + 1.21681515183528 NA Intergenic Intergenic -39415 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-43 chr2 15539040 15539307 + 1.21681515183528 NA intron (NM_001310455, intron 1 of 38) intron (NM_001310455, intron 1 of 38) 12694 NM_001310455 102635496 NM_001310455 ENSMUSG00000075520 Malrd1 Diet1|Gm13318|Gm13364 MAM and LDL receptor class A domain containing 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-27 chr13 23554764 23554971 + 1.21681515183528 NA promoter-TSS (NM_145713) promoter-TSS (NM_145713) -165 NM_145713 14957 Mm.247046 NM_145713 ENSMUSG00000052565 Hist1h1d H1.3|H1D|H1f3|H1s-4 histone cluster 1, H1d protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-27 chr4 120544645 120544872 + 1.21681515183528 NA intron (NM_001355491, intron 13 of 18) intron (NM_001355491, intron 13 of 18) 12527 NM_177570 194219 Mm.29788 NM_177570 ENSMUSG00000047518 Slfnl1 4933406A14Rik schlafen like 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-13 chr19 26750112 26750373 + 1.21681515183528 NA intron (NM_001347439, intron 2 of 7) intron (NM_001347439, intron 2 of 7) 1839 NM_026003 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-17 chr15 34491593 34491828 + 1.21681515183528 NA intron (NM_008287, intron 1 of 5) intron (NM_008287, intron 1 of 5) 3536 NM_008287 15473 Mm.491154 NM_008287 ENSMUSG00000022323 Rida HR12|HRP12|Hrsp12 reactive intermediate imine deaminase A homolog protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-26 chr2 20353032 20353268 + 1.21681515183528 NA intron (NM_001081006, intron 2 of 21) intron (NM_001081006, intron 2 of 21) 63237 NM_001081006 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-36 chr4 134752938 134753144 + 1.21681515183528 NA intron (NM_145554, intron 4 of 8) intron (NM_145554, intron 4 of 8) 14963 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-4 chr1 67038582 67038795 + 1.21681515183528 NA 5' UTR (NM_001190985, exon 1 of 9) 5' UTR (NM_001190985, exon 1 of 9) 146 NM_001190984 14768 Mm.20522 NM_021295 ENSMUSG00000026000 Lancl1 AW124738|Gpr69|Gpr69a|p40 LanC (bacterial lantibiotic synthetase component C)-like 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-6 chr1 149920118 149920406 + 1.21681515183528 NA intron (NM_008869, intron 3 of 17) intron (NM_008869, intron 3 of 17) 2177 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-46 chr8 84064198 84064448 + 1.21681515183528 NA Intergenic Intergenic -2513 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak2_12_7_0.432593154028358_3.21629657701418_1.21681515183528-3 chr7 128612473 128612687 + 1.21681515183528 NA intron (NM_178641, intron 1 of 19) intron (NM_178641, intron 1 of 19) 1215 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-48 chr8 94999956 95000208 + 1.21681515183528 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 15683 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-15 chr19 29482988 29483213 + 1.21681515183528 NA Intergenic Intergenic 38887 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-9 chr7 13039228 13039476 + 1.21681515183528 NA Intergenic B1F|SINE|Alu -1077 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-20 chr11 104616990 104617178 + 1.21681515183528 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 9084 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-22 chr17 25751743 25751983 + 1.21681515183528 NA exon (NM_001356286, exon 7 of 17) exon (NM_001356286, exon 7 of 17) 2515 NM_018857 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-35 chr15 89369005 89369234 + 1.21681515183528 NA intron (NM_001115132, intron 9 of 19) intron (NM_001115132, intron 9 of 19) 4699 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-15 chr14 63978208 63978452 + 1.21681515183528 NA intron (NM_026359, intron 2 of 3) intron (NM_026359, intron 2 of 3) 9450 NM_026359 67750 Mm.33864 NM_026359 ENSMUSG00000021961 4930578I06Rik AI429111 RIKEN cDNA 4930578I06 gene protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-29 chr3 41376409 41376633 + 1.21681515183528 NA Intergenic Intergenic 116678 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-62 chr6 97510449 97510658 + 1.21681515183528 NA intron (NM_145148, intron 2 of 23) intron (NM_145148, intron 2 of 23) -22733 NM_001346637 232288 Mm.27789 NM_145148 ENSMUSG00000030064 Frmd4b 6030440G05Rik|C87375|GOBLIN|GRSP1|R74720 FERM domain containing 4B protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-11 chr9 45839399 45839600 + 1.21681515183528 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 954 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-6 chr11 86381235 86381445 + 1.21681515183528 NA Intergenic Intergenic -23815 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding common_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-2 chr10 96801605 96801814 + 1.21681515183528 NA Intergenic Intergenic 184708 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_8_11_-0.679141292901963_3.24539185427017_1.21681515183528 chr1 9748811 9749031 + 1.21681515183528 NA promoter-TSS (NM_173443) promoter-TSS (NM_173443) -539 NM_173443 70675 Mm.274493 NM_173443 ENSMUSG00000045210 Vcpip1 4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850 valosin containing protein (p97)/p47 complex interacting protein 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-14 chr19 28233099 28233367 + 1.21681515183528 NA Intergenic Intergenic -222067 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-37 chr4 155170648 155170869 + 1.21681515183528 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 51777 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-11 chr10 16588159 16588354 + 1.21681515183528 NA Intergenic Intergenic 507526 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-40 chr18 50025073 50025266 + 1.21681515183528 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -5815 NM_001360935 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-19 chr11 90225206 90225460 + 1.21681515183528 NA Intergenic Intergenic -24143 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-30 chr4 149098509 149098781 + 1.21681515183528 NA intron (NM_019781, intron 1 of 8) intron (NM_019781, intron 1 of 8) 1167 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-3 chr10 60213241 60213461 + 1.21681515183528 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 5909 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-63 chr7 29274613 29274910 + 1.21681515183528 NA intron (NM_011464, intron 1 of 6) intron (NM_011464, intron 1 of 6) 7216 NM_001082548 20733 Mm.295230 NM_011464 ENSMUSG00000074227 Spint2 AL024025|C76321|HAI-2 serine protease inhibitor, Kunitz type 2 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-47 chr2 167231168 167231368 + 1.21681515183528 NA intron (NM_008968, intron 1 of 9) intron (NM_008968, intron 1 of 9) 9269 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-52 chr9 96859533 96859800 + 1.21681515183528 NA intron (NM_001289647, intron 1 of 5) intron (NM_001289647, intron 1 of 5) 29808 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-6 chr4 111719561 111719802 + 1.21681515183528 NA promoter-TSS (NM_026470) promoter-TSS (NM_026470) -329 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-26 chr13 15538247 15538458 + 1.21681515183528 NA intron (NM_008130, intron 2 of 14) intron (NM_008130, intron 2 of 14) 74629 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-45 chr8 64547246 64547567 + 1.21681515183528 NA Intergenic L2|LINE|L2 -32965 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-61 chr6 88606170 88606415 + 1.21681515183528 NA intron (NM_001278671, intron 4 of 5) PB1D7|SINE|Alu 21156 NM_001278671 74589 Mm.196226 NM_029013 ENSMUSG00000033182 Kbtbd12 4833415F11Rik|4933428M03Rik|Klhdc6 kelch repeat and BTB (POZ) domain containing 12 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-25 chr4 45515781 45516018 + 1.21681515183528 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 14929 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-11 chr13 34073301 34073546 + 1.21681515183528 NA TTS (NM_009450) TTS (NM_009450) 4585 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-40 chr5 118757701 118757940 + 1.21681515183528 NA intron (NM_001347445, intron 28 of 30) intron (NM_001347445, intron 28 of 30) -194519 NR_040694 74627 Mm.410828 NR_040694 ENSMUSG00000107144 4930413E15Rik - RIKEN cDNA 4930413E15 gene ncRNA unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-47 chr8 4322256 4322558 + 1.21681515183528 NA intron (NM_010485, intron 1 of 5) intron (NM_010485, intron 1 of 5) 2693 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-28 chr13 30713001 30713289 + 1.21681515183528 NA Intergenic Intergenic -36088 NM_001347508 16364 Mm.4677 NM_013674 ENSMUSG00000021356 Irf4 AI385587|IRF-4|LSIRF|NF-EM5|Spip interferon regulatory factor 4 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-56 chr5 45449916 45450215 + 1.21681515183528 NA exon (NM_024236, exon 1 of 7) exon (NM_024236, exon 1 of 7) 164 NM_024236 110391 Mm.30204 NM_024236 ENSMUSG00000015806 Qdpr 2610008L04Rik|D5Ertd371e|Dhpr|PKU2 quinoid dihydropteridine reductase protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-34 chr5 92369368 92369680 + 1.21681515183528 NA intron (NM_001310664, intron 2 of 10) B4A|SINE|B4 -6228 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-3 chr17 35633972 35634245 + 1.21681515183528 NA Intergenic Intergenic -7471 NM_001244654 672682 Mm.454025 NM_001244654 ENSMUSG00000090588 Gm9573 Muc21 predicted gene 9573 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-12 chr10 67547312 67547562 + 1.21681515183528 NA 3' UTR (NM_001005419, exon 1 of 1) 3' UTR (NM_001005419, exon 1 of 1) 1518 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-3 chr8 106529327 106529543 + 1.21681515183528 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 18583 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-21 chr2 168081270 168081493 + 1.21681515183528 NA intron (NM_021409, intron 1 of 2) CpG 377 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-30 chr3 84595049 84595409 + 1.21681515183528 NA exon (NM_207278, exon 1 of 1) exon (NM_207278, exon 1 of 1) 1655 NM_207278 403175 Mm.83086 NM_207278 ENSMUSG00000047819 Tigd4 C130063O11Rik|Gm418 tigger transposable element derived 4 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-10 chr13 45695471 45695678 + 1.21681515183528 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 188130 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-11 chr18 55491230 55491466 + 1.21681515183528 NA Intergenic Intergenic -498757 NM_001360787 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-60 chr6 86318771 86318959 + 1.21681515183528 NA Intergenic Intergenic -46818 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-44 chr8 36677809 36678012 + 1.21681515183528 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 55144 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-8 chr1 156042566 156042764 + 1.21681515183528 NA intron (NM_172843, intron 2 of 6) intron (NM_172843, intron 2 of 6) 1804 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-51 chr9 63748851 63749150 + 1.21681515183528 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 8994 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-4 chr14 70559988 70560227 + 1.21681515183528 NA intron (NM_021877, intron 6 of 19) intron (NM_021877, intron 6 of 19) 6051 NM_021877 15460 Mm.7598 NM_021877 ENSMUSG00000022096 Hr ALUNC|AU|N|ba|bldy|hr|rh|rh-bmh|rhino hairless protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-57 chr5 121397463 121397711 + 1.21681515183528 NA promoter-TSS (NM_172722) promoter-TSS (NM_172722) -395 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding common_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528 chr1 12620387 12620611 + 1.21681515183528 NA Intergenic Intergenic -47064 NR_045297 329096 Mm.417782 NR_045297 ENSMUSG00000097171 Gm17644 4932411L15 predicted gene, 17644 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-25 chr12 85228315 85228632 + 1.21681515183528 NA Intergenic Intergenic 8992 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-20 chr2 157448426 157448663 + 1.21681515183528 NA intron (NM_001025395, intron 2 of 13) L1M4|LINE|L1 24251 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-37 chr16 37779455 37779682 + 1.21681515183528 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 2513 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528 chr1 64797507 64797723 + 1.21681515183528 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -59865 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-28 chr3 19628549 19628756 + 1.21681515183528 NA Intergenic Intergenic -15808 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-4 chr11 50237016 50237226 + 1.21681515183528 NA intron (NM_001313968, intron 3 of 4) CpG-1900 1411 NM_001313968 17001 Mm.245151 NM_008521 ENSMUSG00000020377 Ltc4s - leukotriene C4 synthase protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-33 chr5 36224754 36224975 + 1.21681515183528 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) 20843 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-8 chr4 149886448 149886656 + 1.21681515183528 NA Intergenic Intergenic 68454 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-6 chr10 118869429 118869648 + 1.21681515183528 NA promoter-TSS (NM_001014390) promoter-TSS (NM_001014390) -635 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-2 chr17 35634000 35634242 + 1.21681515183528 NA Intergenic Intergenic -7484 NM_001244654 672682 Mm.454025 NM_001244654 ENSMUSG00000090588 Gm9573 Muc21 predicted gene 9573 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-24 chr12 69812708 69813105 + 1.21681515183528 NA intron (NM_201519, intron 27 of 30) intron (NM_201519, intron 27 of 30) -22199 NM_183294 71091 Mm.132325 NM_183294 ENSMUSG00000020990 Cdkl1 4933411O17Rik cyclin-dependent kinase-like 1 (CDC2-related kinase) protein-coding unique_peak2_12_7_0.432593154028358_3.21629657701418_1.21681515183528-2 chr15 99726837 99727185 + 1.21681515183528 NA intron (NM_183256, intron 1 of 1) B2_Mm2|SINE|B2 1393 NM_183256 66379 Mm.5265 NM_183256 ENSMUSG00000023020 Cox14 2310016M24Rik|AA959804 cytochrome c oxidase assembly protein 14 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-14 chr14 63123506 63123706 + 1.21681515183528 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 1144 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-45 chr7 47052779 47052981 + 1.21681515183528 NA exon (NM_026436, exon 2 of 3) exon (NM_026436, exon 2 of 3) 2240 NM_026436 67893 Mm.27338 NM_026436 ENSMUSG00000010307 Tmem86a 1810054O13Rik|AI414959|AW742698 transmembrane protein 86A protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-10 chr7 66601318 66601571 + 1.21681515183528 NA Intergenic ORR1F|LTR|ERVL-MaLR 88117 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-32 chr5 35039444 35039765 + 1.21681515183528 NA Intergenic Intergenic -1905 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-9 chr12 33368412 33368681 + 1.21681515183528 NA TTS (NM_001033436) TTS (NM_001033436) 26214 NR_131031 75836 Mm.410807 NR_131031 ENSMUSG00000085664 Atxn7l1os2 4930556N08Rik ataxin 7-like 1, opposite strand 2 ncRNA common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-7 chr3 37835554 37835818 + 1.21681515183528 NA Intergenic Intergenic -63127 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-50 chr9 49911947 49912151 + 1.21681515183528 NA Intergenic Intergenic -112656 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-68 chr9 73951931 73952168 + 1.21681515183528 NA Intergenic Intergenic -18482 NM_001081153 208898 Mm.41035 NM_001081153 ENSMUSG00000062151 Unc13c 1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3 unc-13 homolog C (C. elegans) protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-37 chr5 146963061 146963286 + 1.21681515183528 NA intron (NM_001359467, intron 1 of 3) intron (NM_001359467, intron 1 of 3) 624 NM_001256101 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-35 chr4 126301247 126301513 + 1.21681515183528 NA intron (NM_199473, intron 2 of 3) CpG 14586 NM_199473 329941 Mm.296327 NM_199473 ENSMUSG00000056174 Col8a2 AI429819 collagen, type VIII, alpha 2 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-28 chr4 135044218 135044481 + 1.21681515183528 NA Intergenic Intergenic -76296 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-17 chr11 8440772 8440973 + 1.21681515183528 NA intron (NM_001083587, intron 27 of 30) intron (NM_001083587, intron 27 of 30) 223663 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-20 chr17 3643185 3643447 + 1.21681515183528 NA intron (NM_198958, intron 12 of 12) intron (NM_198958, intron 12 of 12) 52945 NM_198958 224480 Mm.328756 NM_198958 ENSMUSG00000023802 Nox3 GP91-3|het|nmf250 NADPH oxidase 3 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-18 chr15 41691367 41691622 + 1.21681515183528 NA intron (NR_152565, intron 3 of 17) MIR3|SINE|MIR -97501 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-38 chr17 16176786 16177003 + 1.21681515183528 NA Intergenic Intergenic -350308 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-23 chr12 53948718 53948921 + 1.21681515183528 NA intron (NM_013780, intron 6 of 11) intron (NM_013780, intron 6 of 11) 255055 NM_028133 112407 Mm.133037 NM_028133 ENSMUSG00000035105 Egln3 2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20 egl-9 family hypoxia-inducible factor 3 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-18 chr2 148160022 148160264 + 1.21681515183528 NA Intergenic Intergenic -113174 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528 chr1 6313081 6313359 + 1.21681515183528 NA Intergenic Intergenic -46111 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-33 chr4 45459866 45460236 + 1.21681515183528 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -51285 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-47 chr8 91398973 91399179 + 1.21681515183528 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 85551 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-2 chr11 120629515 120629749 + 1.21681515183528 NA exon (NM_010756, exon 3 of 3) exon (NM_010756, exon 3 of 3) 3915 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-27 chr2 38682721 38682971 + 1.21681515183528 NA Intergenic Intergenic 29388 NM_001316687 26423 Mm.31387 NM_139051 ENSMUSG00000026751 Nr5a1 Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1|STF-1 nuclear receptor subfamily 5, group A, member 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-23 chr17 79711014 79711277 + 1.21681515183528 NA intron (NM_009994, intron 2 of 2) ORSL|DNA|hAT-Tip100 3896 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-67 chr9 50732697 50732940 + 1.21681515183528 NA intron (NM_001311069, intron 1 of 19) intron (NM_001311069, intron 1 of 19) -4834 NM_178118 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-23 chr3 96058640 96058938 + 1.21681515183528 NA promoter-TSS (NM_013841) promoter-TSS (NM_013841) -334 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528 chr1 36031129 36031365 + 1.21681515183528 NA Intergenic Intergenic -37153 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-2 chr16 38018357 38018583 + 1.21681515183528 NA intron (NR_040565, intron 1 of 3) intron (NR_040565, intron 1 of 3) 1147 NR_040565 75175 Mm.399335 NR_040565 4930542C21Rik - RIKEN cDNA 4930542C21 gene ncRNA unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-10 chr12 84995672 84995889 + 1.21681515183528 NA promoter-TSS (NM_178363) promoter-TSS (NM_178363) -541 NM_001347421 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-5 chr3 65300637 65300890 + 1.21681515183528 NA intron (NM_001357358, intron 5 of 13) intron (NM_001357358, intron 5 of 13) 1922 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-9 chr12 77092370 77092657 + 1.21681515183528 NA Intergenic Intergenic -130265 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-18 chr11 8483881 8484091 + 1.21681515183528 NA intron (NM_001083587, intron 17 of 30) intron (NM_001083587, intron 17 of 30) 180549 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-39 chr17 21423294 21423604 + 1.21681515183528 NA 5' UTR (NM_011760, exon 1 of 4) 5' UTR (NM_011760, exon 1 of 4) 222 NM_011760 22712 Mm.12916 NM_011760 ENSMUSG00000023882 Zfp54 2810034D10Rik|KRAB10|Zfp-54|Zfp76|mszf83 zinc finger protein 54 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-10 chr10 9557576 9557829 + 1.21681515183528 NA Intergenic Intergenic 117506 NM_177271 320825 Mm.101115 NM_177271 ENSMUSG00000060487 Samd5 E130306M17Rik sterile alpha motif domain containing 5 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-2 chr10 41476250 41476453 + 1.21681515183528 NA promoter-TSS (NM_001164433) promoter-TSS (NM_001164433) 37 NM_138315 171580 Mm.290431 NM_138315 ENSMUSG00000019823 Mical1 MICAL|MICAL-1|Nical microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-64 chr7 46839072 46839297 + 1.21681515183528 NA Intergenic Intergenic -6620 NM_010699 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-32 chr14 28524545 28524814 + 1.21681515183528 NA 3' UTR (NM_009524, exon 5 of 5) 3' UTR (NM_009524, exon 5 of 5) 13274 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-2 chr1 14465519 14465787 + 1.21681515183528 NA Intergenic AT_rich|Low_complexity|Low_complexity -155454 NM_010164 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-6 chr19 22699040 22699247 + 1.21681515183528 NA intron (NM_001035239, intron 3 of 24) intron (NM_001035239, intron 3 of 24) 6524 NM_001035244 226025 Mm.131943 NM_177341 ENSMUSG00000052387 Trpm3 6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2 transient receptor potential cation channel, subfamily M, member 3 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-43 chr7 3705199 3705468 + 1.21681515183528 NA intron (NM_029767, intron 3 of 4) intron (NM_029767, intron 3 of 4) 1292 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-35 chr5 115015578 115015778 + 1.21681515183528 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 4154 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-3 chr1 77460199 77460428 + 1.21681515183528 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 36455 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-15 chr10 120720361 120720705 + 1.21681515183528 NA Intergenic Intergenic -45199 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-39 chr7 12965513 12965719 + 1.21681515183528 NA promoter-TSS (NM_001362139) promoter-TSS (NM_001362139) -222 NM_001362140 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-19 chr16 57235436 57235749 + 1.21681515183528 NA Intergenic Intergenic -4126 NM_001358433 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-30 chr13 54621304 54621513 + 1.21681515183528 NA promoter-TSS (NM_178397) promoter-TSS (NM_178397) -376 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-55 chr4 123623686 123624006 + 1.21681515183528 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) 7426 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-26 chr4 81078214 81078438 + 1.21681515183528 NA Intergenic Intergenic 167640 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-12 chr13 45966881 45967088 + 1.21681515183528 NA Intergenic Intergenic -1993 NM_009124 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-53 chrX 112311600 112311804 + 1.21681515183528 NA intron (NM_001313734, intron 1 of 6) intron (NM_001313734, intron 1 of 6) 350 NM_026565 68117 Mm.161014 NM_026565 ENSMUSG00000025525 Apool 6720473G16Rik|9430083G14Rik|E130106L15Rik apolipoprotein O-like protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-8 chr11 78466108 78466353 + 1.21681515183528 NA intron (NM_026740, intron 1 of 4) intron (NM_026740, intron 1 of 4) 529 NM_026740 52466 Mm.131618 NM_026740 ENSMUSG00000020829 Slc46a1 1110002C08Rik|D11Ertd18e|HCP1|Pcft solute carrier family 46, member 1 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-46 chr7 90059792 90060038 + 1.21681515183528 NA Intergenic Intergenic 30756 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15|Gm26529|Gm32094 RIKEN cDNA E230029C05 gene ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-22 chr12 28000996 28001274 + 1.21681515183528 NA Intergenic Intergenic 547202 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-31 chr4 151997093 151997323 + 1.21681515183528 NA Intergenic Intergenic -1029 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-2 chr16 91484805 91485026 + 1.21681515183528 NA promoter-TSS (NM_010508) promoter-TSS (NM_010508) -300 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-19 chr2 152599414 152599653 + 1.21681515183528 NA Intergenic Intergenic -3048 NM_001037752 433490 Mm.23779 NM_001037752 ENSMUSG00000062124 Defb45 Defb27 defensin beta 45 protein-coding unique_peak2_12_7_0.432593154028358_3.21629657701418_1.21681515183528 chr10 71087398 71087674 + 1.21681515183528 NA intron (NM_031397, intron 1 of 20) MER33|DNA|hAT-Charlie 72154 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-5 chr18 42276186 42276426 + 1.21681515183528 NA intron (NM_172626, intron 1 of 19) intron (NM_172626, intron 1 of 19) 953 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-44 chr7 28821359 28821578 + 1.21681515183528 NA exon (NM_177301, exon 12 of 13) exon (NM_177301, exon 12 of 13) -3870 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-54 chr4 59758755 59758960 + 1.21681515183528 NA Intergenic Intergenic 24998 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-31 chr13 63917397 63917609 + 1.21681515183528 NA Intergenic Intergenic 102263 NM_023507 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-16 chr15 33625678 33626011 + 1.21681515183528 NA intron (NR_045070, intron 4 of 5) intron (NR_045070, intron 4 of 5) 27592 NR_045070 75880 Mm.396109 NR_045070 ENSMUSG00000115779 4930592A05Rik - RIKEN cDNA 4930592A05 gene ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-49 chr3 81102703 81102923 + 1.21681515183528 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 66397 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528 chr1 63976721 63977001 + 1.21681515183528 NA Intergenic Intergenic 12134 NR_027824 433315 Mm.342696 NM_001013800 ENSMUSG00000044689 Gm13749 - predicted gene 13749 ncRNA unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-42 chr19 55867448 55867637 + 1.21681515183528 NA intron (NR_138565, intron 4 of 15) intron (NR_138565, intron 4 of 15) -27779 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-25 chr18 61911496 61911756 + 1.21681515183528 NA 5' UTR (NM_198649, exon 1 of 23) 5' UTR (NM_198649, exon 1 of 23) 198 NM_198649 319713 Mm.329478 NM_198649 ENSMUSG00000032735 Ablim3 AW990719|D930036B08Rik actin binding LIM protein family, member 3 protein-coding unique_peak2_7_11_-0.847867476930116_3.1610287622561_1.21681515183528-43 chr8 23041615 23041927 + 1.21681515183528 NA intron (NM_001277284, intron 1 of 42) intron (NM_001277284, intron 1 of 42) 6672 NM_001277284 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-3 chr1 64927047 64927249 + 1.21681515183528 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 29676 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-5 chr1 93136058 93136349 + 1.21681515183528 NA intron (NM_001276710, intron 2 of 10) intron (NM_001276710, intron 2 of 10) 963 NM_016702 11611 Mm.7457 NM_016702 ENSMUSG00000026272 Agxt AGT|Agt1|Agxt1|SPT alanine-glyoxylate aminotransferase protein-coding common_peak2_12_7_0.432593154028358_3.21629657701418_1.21681515183528-2 chr3 79678313 79678539 + 1.21681515183528 NA intron (NM_212452, intron 5 of 17) intron (NM_212452, intron 5 of 17) 49347 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding unique_peak2_8_11_-0.679141292901963_3.24539185427017_1.21681515183528-34 chr4 53799667 53799973 + 1.21681515183528 NA Intergenic Intergenic 20115 NM_009317 21350 Mm.56955 NM_009317 ENSMUSG00000028417 Tal2 bHLHa19 T cell acute lymphocytic leukemia 2 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-51 chr3 119995906 119996109 + 1.21681515183528 NA Intergenic Intergenic -212619 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak1_12_7_0.432593154028358_3.21629657701418_1.21681515183528-66 chr8 120573833 120574079 + 1.21681515183528 NA intron (NM_001145896, intron 11 of 15) intron (NM_001145896, intron 11 of 15) 15119 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak2_74_87_-0.516297154257535_6.20128304150853_1.21620508287991 chr11 65806296 65807576 + 1.21620508287991 NA promoter-TSS (NM_026107) promoter-TSS (NM_026107) -239 NM_001302374 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding common_peak2_74_87_-0.516297154257535_6.20128304150853_1.21620508287991-2 chr8 107056913 107057570 + 1.21620508287991 NA promoter-TSS (NM_139229) promoter-TSS (NM_139229) 364 NR_028367 66164 Mm.334789 NM_025391 ENSMUSG00000031917 Nip7 1110017C15Rik|6330509M23Rik|AA408773|AA410017|PEachy NIP7, nucleolar pre-rRNA processing protein protein-coding common_peak1_105_62_0.4614351521967_6.20799749959827_1.2162050828799-3 chr8 3514841 3515937 + 1.2162050828799 NA promoter-TSS (NM_015801) promoter-TSS (NM_015801) 5 NM_015801 50767 Mm.23085 NM_015801 ENSMUSG00000004565 Pnpla6 AI661849|MSws|Nte patatin-like phospholipase domain containing 6 protein-coding common_peak1_105_62_0.4614351521967_6.20799749959827_1.2162050828799 chr11 93996182 93997035 + 1.2162050828799 NA intron (NM_027569, intron 1 of 28) CpG 517 NM_027569 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_105_62_0.4614351521967_6.20799749959827_1.2162050828799-2 chr16 45892921 45894266 + 1.2162050828799 NA Intergenic Intergenic -48842 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_120_130_-0.405112240561126_6.83086688125689_1.21509361192759 chr11 116332066 116333605 + 1.21509361192759 NA intron (NM_008240, intron 2 of 2) intron (NM_008240, intron 2 of 2) 2519 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-57 chr8 94032437 94032708 + 1.21398586181642 NA intron (NM_026623, intron 1 of 6) intron (NM_026623, intron 1 of 6) 4467 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-21 chr14 13691219 13691440 + 1.21398586181642 NA Intergenic Intergenic 20453 NM_177624 218739 Mm.39919 NM_177624 ENSMUSG00000044772 Sntn A430083B19Rik sentan, cilia apical structure protein protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-18 chr13 94133722 94133927 + 1.21398586181642 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 76028 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-29 chr3 122519383 122519633 + 1.21398586181642 NA intron (NM_013867, intron 8 of 11) intron (NM_013867, intron 8 of 11) 22173 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-56 chr5 140765795 140766060 + 1.21398586181642 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 41800 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-38 chr9 110844816 110845078 + 1.21398586181642 NA intron (NM_183103, intron 1 of 4) intron (NM_183103, intron 1 of 4) 441 NM_183103 74306 Mm.87419 NM_183103 ENSMUSG00000049719 Prss46 1700112C13Rik|79H19B|Tessp6 protease, serine 46 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-40 chr2 166236503 166236703 + 1.21398586181642 NA Intergenic Intergenic -37305 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 - predicted gene 11468 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-50 chr5 148965223 148965452 + 1.21398586181642 NA Intergenic Intergenic 15087 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-7 chr3 96421692 96421901 + 1.21398586181642 NA Intergenic Intergenic -6963 NR_001579 21748 NR_001579 ENSMUSG00000064796 Terc mTER|mTR telomerase RNA component ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-38 chr8 64613467 64613682 + 1.21398586181642 NA intron (NM_013494, intron 3 of 8) RSINE1|SINE|B4 79535 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-15 chr15 25271585 25271804 + 1.21398586181642 NA Intergenic Intergenic 142070 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-66 chr8 31601540 31601823 + 1.21398586181642 NA Intergenic Intergenic 233932 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_11_6_0.510575703960891_3.06264277403805_1.21398586181642 chr2 129209591 129209815 + 1.21398586181642 NA intron (NM_015747, intron 9 of 10) intron (NM_015747, intron 9 of 10) 2607 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-47 chr5 91036994 91037181 + 1.21398586181642 NA Intergenic Intergenic 9570 NM_053087 71920 Mm.197319 NM_053087 ENSMUSG00000035020 Epgn 2310069M11Rik|epigen epithelial mitogen protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-25 chr2 50447983 50448210 + 1.21398586181642 NA Intergenic Intergenic 93071 NR_154590 102634280 NR_154590 Gm48908 - predicted gene 48908 ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-36 chr19 16021886 16022093 + 1.21398586181642 NA Intergenic Lx2|LINE|L1 36914 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-54 chr7 143009197 143009412 + 1.21398586181642 NA intron (NM_020286, intron 2 of 7) GA-rich|Low_complexity|Low_complexity 3645 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-40 chr2 151925202 151925507 + 1.21398586181642 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 14147 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-37 chr2 127444412 127444700 + 1.21398586181642 NA promoter-TSS (NM_029629) promoter-TSS (NM_029629) 9 NM_029629 68126 Mm.288676 NM_029629 ENSMUSG00000027371 Fahd2a 1500003K14Rik|B430104H02Rik|Cgi-105|Fahd2 fumarylacetoacetate hydrolase domain containing 2A protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-11 chr16 24400482 24400736 + 1.21398586181642 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -6954 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-26 chr2 135860297 135860523 + 1.21398586181642 NA intron (NM_001355156, intron 3 of 37) intron (NM_001355156, intron 3 of 37) 95572 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-27 chr15 86081985 86082185 + 1.21398586181642 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 23358 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-24 chr15 53081426 53081647 + 1.21398586181642 NA intron (NM_010162, intron 8 of 10) intron (NM_010162, intron 8 of 10) 264647 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-6 chr10 77333247 77333469 + 1.21398586181642 NA intron (NM_001024838, intron 2 of 11) intron (NM_001024838, intron 2 of 11) 74058 NM_030262 80294 Mm.203556 NM_030262 ENSMUSG00000020260 Pofut2 2310011G23Rik|AI256847|BC003494|C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-20 chr3 53099740 53099966 + 1.21398586181642 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 58306 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-15 chr13 37946646 37946884 + 1.21398586181642 NA intron (NM_001177869, intron 10 of 11) intron (NM_001177869, intron 10 of 11) 47443 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_11_6_0.510575703960891_3.06264277403805_1.21398586181642 chr2 160225044 160225312 + 1.21398586181642 NA Intergenic MIRb|SINE|MIR 102316 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-30 chr18 75859532 75859779 + 1.21398586181642 NA intron (NM_145356, intron 1 of 4) intron (NM_145356, intron 1 of 4) 39477 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-31 chr17 27153544 27153847 + 1.21398586181642 NA intron (NM_173027, intron 2 of 5) intron (NM_173027, intron 2 of 5) 14069 NM_173027 271424 Mm.209679 NM_173027 ENSMUSG00000024210 Ip6k3 D830007E07Rik|Ihpk3 inositol hexaphosphate kinase 3 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-28 chr17 34893923 34894134 + 1.21398586181642 NA promoter-TSS (NM_198886) promoter-TSS (NM_198886) -531 NM_198886 193736 Mm.161119 NM_198886 ENSMUSG00000049823 Zbtb12 BC020447|Bat-9|Bat9|G10|NG35 zinc finger and BTB domain containing 12 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-44 chr4 150509026 150509244 + 1.21398586181642 NA intron (NM_001085492, intron 9 of 22) intron (NM_001085492, intron 9 of 22) 143039 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-31 chr7 84747597 84747796 + 1.21398586181642 NA intron (NR_038175, intron 2 of 4) intron (NR_038175, intron 2 of 4) -57739 NM_001360582 65098 Mm.209349 NM_022985 ENSMUSG00000030629 Zfand6 3110005P07Rik|Awp1|Za20d3 zinc finger, AN1-type domain 6 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-4 chr1 71944627 71944856 + 1.21398586181642 NA Intergenic Intergenic 56629 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-23 chr15 64474917 64475107 + 1.21398586181642 NA Intergenic B4A|SINE|B4 -92093 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-49 chr4 150864373 150864566 + 1.21398586181642 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 9399 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-17 chr16 24767779 24768086 + 1.21398586181642 NA intron (NM_178665, intron 8 of 12) RMER20B|LTR|ERVK 46077 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-48 chr5 93085304 93085751 + 1.21398586181642 NA Intergenic L3|LINE|CR1 -7889 NM_001009818 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-31 chr19 18597772 18598070 + 1.21398586181642 NA intron (NM_017375, intron 2 of 9) intron (NM_017375, intron 2 of 9) 33892 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-8 chr4 88437093 88437296 + 1.21398586181642 NA intron (NM_025760, intron 2 of 6) intron (NM_025760, intron 2 of 6) 1732 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-6 chr11 16799490 16799802 + 1.21398586181642 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 47443 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-10 chr10 87874889 87875124 + 1.21398586181642 NA intron (NM_001111274, intron 2 of 4) intron (NM_001111274, intron 2 of 4) 13895 NM_001111276 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-29 chr17 47298871 47299076 + 1.21398586181642 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 68743 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-3 chr1 55201782 55202037 + 1.21398586181642 NA intron (NM_001356287, intron 3 of 7) intron (NM_001356287, intron 3 of 7) 24873 NM_001356288 74013 Mm.292050 NM_028713 ENSMUSG00000025978 Rftn2 2700010E02Rik|3222401M22Rik raftlin family member 2 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-27 chr5 102844143 102844357 + 1.21398586181642 NA promoter-TSS (NM_001346585) promoter-TSS (NM_001346585) -757 NM_001346585 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-55 chr5 134943252 134943493 + 1.21398586181642 NA TTS (NM_024479) TTS (NM_024479) 3562 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-10 chr15 95884818 95885081 + 1.21398586181642 NA intron (NM_175344, intron 2 of 19) RMER17C2|LTR|ERVK -54877 NR_155276 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-35 chr2 75661531 75661787 + 1.21398586181642 NA intron (NM_001359971, intron 2 of 10) intron (NM_001359971, intron 2 of 10) 2369 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-22 chr14 36892787 36892986 + 1.21398586181642 NA intron (NM_027045, intron 9 of 10) intron (NM_027045, intron 9 of 10) 26649 NM_001347503 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-58 chr8 120576218 120576436 + 1.21398586181642 NA exon (NM_198671, exon 14 of 16) exon (NM_198671, exon 14 of 16) 12748 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-12 chr12 73780435 73780672 + 1.21398586181642 NA Intergenic Intergenic -120771 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-4 chr2 160262180 160262382 + 1.21398586181642 NA Intergenic Intergenic 65213 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-14 chr12 69890329 69890539 + 1.21398586181642 NA intron (NM_201519, intron 1 of 30) intron (NM_201519, intron 1 of 30) -2671 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-45 chr5 76952920 76953146 + 1.21398586181642 NA intron (NM_001356974, intron 1 of 8) intron (NM_001356974, intron 1 of 8) -1455 NM_172146 231327 Mm.202337 NM_172146 ENSMUSG00000029246 Ppat 5730454C12Rik|AA408689|AA675351|AI507113|C79945 phosphoribosyl pyrophosphate amidotransferase protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642 chr1 134699551 134699791 + 1.21398586181642 NA intron (NM_009307, intron 2 of 9) intron (NM_009307, intron 2 of 9) -9629 NM_001355726 20980 Mm.5102 NM_009307 ENSMUSG00000026452 Syt2 IP4BP|R74640|mKIAA4194|sytII synaptotagmin II protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-32 chr7 100923418 100923633 + 1.21398586181642 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 8636 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-61 chr9 103023346 103023598 + 1.21398586181642 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 14983 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-27 chr2 137444791 137445034 + 1.21398586181642 NA Intergenic Intergenic -328392 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-69 chrX 13025207 13025397 + 1.21398586181642 NA Intergenic Intergenic -16713 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-7 chr10 111389651 111389842 + 1.21398586181642 NA Intergenic Intergenic -83481 NM_001358932 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642 chr1 34123233 34123430 + 1.21398586181642 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 5972 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-17 chr13 9044223 9044428 + 1.21398586181642 NA Intergenic Intergenic -48313 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-33 chr5 66545260 66545509 + 1.21398586181642 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 73433 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-5 chr4 89061928 89062149 + 1.21398586181642 NA intron (NR_033533, intron 2 of 2) intron (NR_033533, intron 2 of 2) 11731 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-38 chr2 153743372 153743571 + 1.21398586181642 NA intron (NM_007896, intron 1 of 6) intron (NM_007896, intron 1 of 6) 2184 NM_007896 13589 Mm.143877 NM_007896 ENSMUSG00000027479 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-49 chr5 113158248 113158443 + 1.21398586181642 NA intron (NM_172884, intron 1 of 7) MIRc|SINE|MIR 4968 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-16 chr2 22775225 22775426 + 1.21398586181642 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 998 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-55 chr8 31378225 31378441 + 1.21398586181642 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 10584 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-32 chr2 13535414 13535619 + 1.21398586181642 NA intron (NM_010067, intron 1 of 10) intron (NM_010067, intron 1 of 10) 9148 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-3 chr15 37618057 37618320 + 1.21398586181642 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 62386 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-32 chr4 63745011 63745374 + 1.21398586181642 NA promoter-TSS (NM_177371) promoter-TSS (NM_177371) -79 NM_177371 326623 Mm.208152 NM_177371 ENSMUSG00000050395 Tnfsf15 Tl1|Tl1a|Tnlg1b|Vegi tumor necrosis factor (ligand) superfamily, member 15 protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-5 chr17 56268876 56269114 + 1.21398586181642 NA TTS (NM_174989) TTS (NM_174989) 7772 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-13 chr13 107675510 107675760 + 1.21398586181642 NA Intergenic Intergenic -11762 NR_045900 72257 Mm.234155 NR_045900 ENSMUSG00000102000 1700006H21Rik - RIKEN cDNA 1700006H21 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-23 chr2 20569074 20569307 + 1.21398586181642 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 49677 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-59 chr8 122332406 122332763 + 1.21398586181642 NA intron (NM_009569, intron 5 of 9) intron (NM_009569, intron 5 of 9) 30244 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-68 chr9 72075647 72075865 + 1.21398586181642 NA intron (NM_011544, intron 3 of 20) intron (NM_011544, intron 3 of 20) 35445 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-43 chr3 57508288 57508519 + 1.21398586181642 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 67473 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-31 chr4 32571786 32572059 + 1.21398586181642 NA promoter-TSS (NR_026843) promoter-TSS (NR_026843) -260 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-54 chr5 134772240 134772480 + 1.21398586181642 NA Intergenic Intergenic -25037 NM_007925 13717 Mm.275320 NM_007925 ENSMUSG00000029675 Eln AI385707|AI480567|E030024M20Rik elastin protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-4 chr1 90753729 90753963 + 1.21398586181642 NA Intergenic Intergenic 90125 NM_001243008 12835 Mm.7562 NM_009935 ENSMUSG00000048126 Col6a3 AI507288|Col6a-3 collagen, type VI, alpha 3 protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642 chr10 37141336 37141554 + 1.21398586181642 NA Intergenic Intergenic -2519 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-18 chr17 56028437 56028642 + 1.21398586181642 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 8098 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-2 chr13 64152329 64152579 + 1.21398586181642 NA promoter-TSS (NM_001361047) promoter-TSS (NM_001361047) -81 NM_001361047 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-33 chr7 144020074 144020282 + 1.21398586181642 NA Intergenic Intergenic 10924 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-13 chr16 52746398 52746620 + 1.21398586181642 NA Intergenic Intergenic 69235 NR_040495 73820 Mm.60493 NR_040495 4930404A05Rik - RIKEN cDNA 4930404A05 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-41 chr9 58457641 58457883 + 1.21398586181642 NA intron (NR_040736, intron 1 of 2) intron (NR_040736, intron 1 of 2) 2589 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-65 chr7 99085841 99086034 + 1.21398586181642 NA intron (NM_178635, intron 5 of 14) intron (NM_178635, intron 5 of 14) 55207 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-46 chr5 88764559 88764748 + 1.21398586181642 NA promoter-TSS (NM_007832) promoter-TSS (NM_007832) -360 NM_007832 13178 Mm.298892 NM_007832 ENSMUSG00000029366 Dck - deoxycytidine kinase protein-coding common_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-2 chr13 110917118 110917374 + 1.21398586181642 NA Intergenic Intergenic -13400 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642 chr1 9631291 9631508 + 1.21398586181642 NA promoter-TSS (NR_015470) promoter-TSS (NR_015470) -307 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-39 chr2 155728739 155729010 + 1.21398586181642 NA intron (NM_145537, intron 2 of 10) intron (NM_145537, intron 2 of 10) 601 NM_145537 108687 Mm.273706 NM_145537 ENSMUSG00000038312 Edem2 9530090G24Rik|AI327354 ER degradation enhancer, mannosidase alpha-like 2 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-42 chr3 7618071 7618344 + 1.21398586181642 NA Intergenic Intergenic -4447 NM_001313888 16196 Mm.3825 NM_008371 ENSMUSG00000040329 Il7 A630026I06Rik|Il-7|hlb368 interleukin 7 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-3 chr1 43363194 43363413 + 1.21398586181642 NA Intergenic Intergenic -82448 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-29 chr15 99045285 99045474 + 1.21398586181642 NA Intergenic Intergenic -9795 NM_001163588 19132 Mm.2477 NM_013639 ENSMUSG00000023484 Prph Prph1 peripherin protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-2 chr1 87961909 87962165 + 1.21398586181642 NA intron (NM_001033291, intron 19 of 27) intron (NM_001033291, intron 19 of 27) 46514 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-22 chr14 79397816 79398010 + 1.21398586181642 NA 5' UTR (NM_145960, exon 1 of 11) 5' UTR (NM_145960, exon 1 of 11) 141 NM_145960 211253 Mm.35306 NM_145960 ENSMUSG00000022022 Mtrf1 A830062K05Rik|MtRF-1 mitochondrial translational release factor 1 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-7 chr12 31838850 31839065 + 1.21398586181642 NA intron (NM_001163126, intron 13 of 22) B1_Mus1|SINE|Alu 111288 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-33 chr17 47436687 47436923 + 1.21398586181642 NA exon (NM_145489, exon 1 of 5) exon (NM_145489, exon 1 of 5) 166 NM_145489 224833 Mm.218444 NM_145489 ENSMUSG00000034382 AI661453 - expressed sequence AI661453 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-60 chr6 100714191 100714440 + 1.21398586181642 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 9581 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-9 chr12 86101490 86101711 + 1.21398586181642 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 19039 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-2 chr1 43219573 43219770 + 1.21398586181642 NA Intergenic Intergenic -22910 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-14 chr14 101951508 101951753 + 1.21398586181642 NA Intergenic Intergenic 111007 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-9 chr11 72451368 72451666 + 1.21398586181642 NA TTS (NM_001276383) TTS (NM_001276383) 10190 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-25 chr15 75945010 75945282 + 1.21398586181642 NA intron (NM_030199, intron 1 of 1) intron (NM_030199, intron 1 of 1) 4194 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding common_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-2 chr15 90494838 90495050 + 1.21398586181642 NA intron (NM_001357979, intron 18 of 18) intron (NM_001357979, intron 18 of 18) 141234 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA common_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642 chr11 51881197 51881422 + 1.21398586181642 NA Intergenic Intergenic -23679 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-24 chr2 32661884 32662135 + 1.21398586181642 NA intron (NM_001146348, intron 2 of 14) intron (NM_001146348, intron 2 of 14) 9680 NR_035479 100316776 NR_035479 ENSMUSG00000093336 Mir1954 mmu-mir-1954 microRNA 1954 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-33 chr2 24341975 24342257 + 1.21398586181642 NA intron (NM_031167, intron 1 of 4) intron (NM_031167, intron 1 of 4) -3175 NM_001159562 16181 Mm.882 NM_031167 ENSMUSG00000026981 Il1rn F630041P17Rik|IL-1ra interleukin 1 receptor antagonist protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-8 chr12 80349140 80349343 + 1.21398586181642 NA intron (NM_177267, intron 7 of 8) intron (NM_177267, intron 7 of 8) 42436 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-5 chr10 67757012 67757283 + 1.21398586181642 NA Intergenic Intergenic 155515 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-19 chr17 62469318 62469550 + 1.21398586181642 NA Intergenic Intergenic 411883 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-37 chr2 68885427 68885619 + 1.21398586181642 NA intron (NM_001347161, intron 1 of 10) intron (NM_001347161, intron 1 of 10) 24082 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-14 chr13 5548920 5549114 + 1.21398586181642 NA Intergenic Intergenic 309075 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-32 chr17 47276185 47276397 + 1.21398586181642 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 46061 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-23 chr4 89510644 89510844 + 1.21398586181642 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -177454 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-9 chr11 35921095 35921283 + 1.21398586181642 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 58900 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-25 chr4 116301553 116301806 + 1.21398586181642 NA 3' UTR (NM_001355584, exon 11 of 11) 3' UTR (NM_001355584, exon 11 of 11) 78932 NM_001355586 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55|p55pik phosphoinositide-3-kinase regulatory subunit 3 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-24 chr4 116077966 116078167 + 1.21398586181642 NA intron (NM_153521, intron 1 of 9) intron (NM_153521, intron 1 of 9) 2797 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-26 chr5 73168168 73168374 + 1.21398586181642 NA intron (NM_028194, intron 3 of 62) intron (NM_028194, intron 3 of 62) 88347 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-24 chr15 71848846 71849083 + 1.21398586181642 NA intron (NM_027174, intron 46 of 63) intron (NM_027174, intron 46 of 63) -121126 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-42 chr9 62368314 62368538 + 1.21398586181642 NA intron (NM_009672, intron 1 of 6) intron (NM_009672, intron 1 of 6) 27083 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-2 chr1 40181884 40182160 + 1.21398586181642 NA Intergenic Intergenic -43058 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-5 chr1 75339711 75339922 + 1.21398586181642 NA Intergenic Intergenic -20476 NM_010043 13346 Mm.6712 NM_010043 ENSMUSG00000026208 Des - desmin protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-11 chr11 8659759 8659953 + 1.21398586181642 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 4679 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-16 chr15 81159446 81159645 + 1.21398586181642 NA intron (NM_001082536, intron 1 of 13) ID_B1|SINE|B4 31212 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-2 chr13 6647623 6647884 + 1.21398586181642 NA intron (NM_019703, intron 1 of 21) intron (NM_019703, intron 1 of 21) 1018 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-34 chr2 32905748 32905950 + 1.21398586181642 NA exon (NM_146119, exon 2 of 14) exon (NM_146119, exon 2 of 14) 29715 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-11 chr12 24894236 24894508 + 1.21398586181642 NA intron (NM_001083341, intron 3 of 11) intron (NM_001083341, intron 3 of 11) 62773 NM_001083341 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-60 chr9 14521578 14521767 + 1.21398586181642 NA Intergenic LTR16A1|LTR|ERVL 21053 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-45 chr4 109484993 109485206 + 1.21398586181642 NA Intergenic Intergenic -8594 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-63 chr7 49207548 49207746 + 1.21398586181642 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -38542 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-5 chr11 104673725 104673971 + 1.21398586181642 NA Intergenic Intergenic 65848 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-10 chr11 44535418 44535632 + 1.21398586181642 NA intron (NM_001166553, intron 3 of 5) intron (NM_001166553, intron 3 of 5) 16148 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-11 chr13 21780753 21781048 + 1.21398586181642 NA promoter-TSS (NM_020034) promoter-TSS (NM_020034) -275 NM_020034 56702 Mm.221314 NM_020034 ENSMUSG00000058773 Hist1h1b H1.5|H1B|H1f5|H1s-3 histone cluster 1, H1b protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-17 chr2 117678391 117678605 + 1.21398586181642 NA Intergenic Intergenic 134304 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-4 chr1 186584864 186585083 + 1.21398586181642 NA Intergenic Intergenic -26292 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-21 chr19 24707899 24708119 + 1.21398586181642 NA intron (NM_175013, intron 10 of 10) intron (NM_175013, intron 10 of 10) 34001 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-34 chr5 111332689 111332922 + 1.21398586181642 NA intron (NM_001359216, intron 1 of 9) intron (NM_001359216, intron 1 of 9) 2108 NM_001359216 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-2 chr1 135822615 135822819 + 1.21398586181642 NA intron (NM_133664, intron 1 of 9) intron (NM_133664, intron 1 of 9) 4119 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-12 chr13 91365799 91366018 + 1.21398586181642 NA Intergenic Intergenic 22177 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-22 chr19 41697374 41697626 + 1.21398586181642 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 46356 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642 chr1 151347882 151348112 + 1.21398586181642 NA intron (NM_001039511, intron 1 of 7) B1F1|SINE|Alu 3499 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-41 chr3 63905241 63905453 + 1.21398586181642 NA Intergenic CpG 23451 NM_001357824 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-44 chr4 3710659 3710941 + 1.21398586181642 NA intron (NM_001111096, intron 1 of 12) intron (NM_001111096, intron 1 of 12) -4164 NR_028126 70720 Mm.445696 NR_028126 6330407A03Rik - RIKEN cDNA 6330407A03 gene ncRNA unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-19 chr2 180444560 180444791 + 1.21398586181642 NA Intergenic Intergenic -11570 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-35 chr9 7571972 7572264 + 1.21398586181642 NA exon (NM_001310717, exon 2 of 10) exon (NM_001310717, exon 2 of 10) 722 NM_001310717 234911 Mm.334940 NM_001030289 ENSMUSG00000070323 Mmp27 Gm180 matrix metallopeptidase 27 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-6 chr12 28636177 28636442 + 1.21398586181642 NA promoter-TSS (NM_011300) promoter-TSS (NM_011300) -356 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-35 chr19 7309592 7309799 + 1.21398586181642 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -14248 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-51 chr7 43788626 43788828 + 1.21398586181642 NA Intergenic Intergenic -3164 NM_028660 101533 Mm.19942 NM_028660 ENSMUSG00000047884 Klk9 1200016C12Rik|AI324041 kallikrein related-peptidase 9 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-37 chr7 89627924 89628123 + 1.21398586181642 NA Intergenic Intergenic -4795 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-17 chr13 71376971 71377208 + 1.21398586181642 NA Intergenic Intergenic 270000 NR_130325 100316804 NR_130325 ENSMUSG00000080580 Mir466f-4 Mirn466f-4|mmu-mir-466f-4 microRNA 466f-4 ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-28 chr15 98692606 98692809 + 1.21398586181642 NA Intergenic ID_B1|SINE|B4 -15246 NM_172612 223881 Mm.274010 NM_172612 ENSMUSG00000054855 Rnd1 A830014L09Rik|Arhs Rho family GTPase 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-52 chr5 101863721 101863915 + 1.21398586181642 NA exon (NM_172882, exon 52 of 67) exon (NM_172882, exon 52 of 67) 98688 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642 chr1 9941675 9941916 + 1.21398586181642 NA TTS (NR_024067) TTS (NR_024067) 748 NR_004410 266793 NR_004410 ENSMUSG00000093178 Snord87 MBII-276|Rnu87|U87 small nucleolar RNA, C/D box 87 snoRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-30 chr16 32331752 32331966 + 1.21398586181642 NA promoter-TSS (NM_177633) promoter-TSS (NM_177633) -393 NM_177633 224111 Mm.31275 NM_177633 ENSMUSG00000053774 Ubxn7 A630090P18|AI196514|Ubxd7|mKIAA0794 UBX domain protein 7 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-21 chr3 138454617 138454825 + 1.21398586181642 NA exon (NM_001288578, exon 8 of 9) exon (NM_001288578, exon 8 of 9) 11628 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-6 chr1 162136456 162136655 + 1.21398586181642 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -81068 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-25 chr15 63721130 63721320 + 1.21398586181642 NA Intergenic Intergenic 87514 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-14 chr17 29438053 29438280 + 1.21398586181642 NA Intergenic Intergenic -52879 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-48 chr4 148518325 148518530 + 1.21398586181642 NA intron (NM_020009, intron 30 of 57) intron (NM_020009, intron 30 of 57) -17965 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-62 chr7 45522892 45523173 + 1.21398586181642 NA TTS (NM_008807) TTS (NM_008807) 3236 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-59 chr6 82754938 82755176 + 1.21398586181642 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 19397 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-16 chr13 70600632 70600838 + 1.21398586181642 NA intron (NM_144837, intron 14 of 18) intron (NM_144837, intron 14 of 18) 27494 NR_045934 73584 Mm.442491 NR_045934 ENSMUSG00000101051 1700100L14Rik - RIKEN cDNA 1700100L14 gene ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-34 chr18 35812959 35813172 + 1.21398586181642 NA Intergenic Intergenic -16723 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-3 chr14 105590108 105590312 + 1.21398586181642 NA intron (NR_102319, intron 1 of 2) intron (NR_102319, intron 1 of 2) 661 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-7 chr11 51951229 51951469 + 1.21398586181642 NA Intergenic B1_Mur4|SINE|Alu -16282 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-39 chr2 110190403 110190784 + 1.21398586181642 NA Intergenic ID_B1|SINE|B4 115132 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-18 chr13 108629171 108629423 + 1.21398586181642 NA Intergenic Intergenic -24880 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-18 chr2 163623598 163623801 + 1.21398586181642 NA 3' UTR (NM_012032, exon 10 of 10) 3' UTR (NM_012032, exon 10 of 10) 16487 NM_001305803 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-42 chr3 98040763 98040951 + 1.21398586181642 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 27319 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-28 chr6 53068574 53068820 + 1.21398586181642 NA promoter-TSS (NM_173406) promoter-TSS (NM_173406) -73 NM_173406 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-61 chr7 38107003 38107295 + 1.21398586181642 NA intron (NM_007633, intron 1 of 11) CpG 341 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-52 chr7 75520491 75520784 + 1.21398586181642 NA intron (NM_029332, intron 1 of 36) intron (NM_029332, intron 1 of 36) 65103 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-13 chr12 35831829 35832045 + 1.21398586181642 NA Intergenic Intergenic -93684 NM_207531 403205 Mm.190508 NM_207531 ENSMUSG00000036231 Agr3 BCMP11|E030025L21Rik|Gm888 anterior gradient 3 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-26 chr15 78850448 78850657 + 1.21398586181642 NA TTS (NM_025622) TTS (NM_025622) 4977 NM_025622 107753 Mm.390793 NM_025622 ENSMUSG00000043501 Lgals2 2200008F12Rik|AI324147 lectin, galactose-binding, soluble 2 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-3 chr10 120706514 120706760 + 1.21398586181642 NA Intergenic Intergenic -59095 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-36 chr9 31319855 31320054 + 1.21398586181642 NA intron (NM_001080817, intron 3 of 20) L1MC5a|LINE|L1 4847 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-19 chr13 96544190 96544405 + 1.21398586181642 NA intron (NM_023420, intron 1 of 17) intron (NM_023420, intron 1 of 17) 1562 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-62 chr9 118738746 118739056 + 1.21398586181642 NA intron (NM_001113514, intron 1 of 13) intron (NM_001113514, intron 1 of 13) 27209 NM_001113514 104099 Mm.335520 NM_133721 ENSMUSG00000039115 Itga9 (alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e integrin alpha 9 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-15 chr17 43847448 43847668 + 1.21398586181642 NA intron (NM_001357742, intron 2 of 4) intron (NM_001357742, intron 2 of 4) 43555 NM_001286653 53901 Mm.251242 NM_030598 ENSMUSG00000039601 Rcan2 Csp2|Dscr1l1|MCIP2|ZAKI-4 regulator of calcineurin 2 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-26 chr16 11025865 11026060 + 1.21398586181642 NA Intergenic Intergenic 17064 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-9 chr10 64076739 64076934 + 1.21398586181642 NA intron (NM_178678, intron 2 of 2) intron (NM_178678, intron 2 of 2) 13419 NM_178678 216028 Mm.431318 NM_178678 ENSMUSG00000042846 Lrrtm3 9630044H04Rik leucine rich repeat transmembrane neuronal 3 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-38 chr2 70152681 70153002 + 1.21398586181642 NA intron (NM_177376, intron 8 of 34) intron (NM_177376, intron 8 of 34) 113715 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-13 chr12 101028528 101028819 + 1.21398586181642 NA intron (NM_026681, intron 1 of 29) CpG 218 NM_001362342 68339 Mm.156217 NM_026681 ENSMUSG00000021182 Ccdc88c 0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509 coiled-coil domain containing 88C protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-51 chr5 31155475 31155717 + 1.21398586181642 NA TTS (NM_027901) TTS (NM_027901) -1345 NM_008622 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-16 chr13 6611479 6611862 + 1.21398586181642 NA intron (NM_019703, intron 8 of 21) intron (NM_019703, intron 8 of 21) 37101 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-4 chr15 10746456 10746695 + 1.21398586181642 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 31675 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-47 chr4 142097694 142097892 + 1.21398586181642 NA Intergenic Intergenic -13489 NM_145402 214359 Mm.27587 NM_145402 ENSMUSG00000040616 Tmem51 BC003277 transmembrane protein 51 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-28 chr3 103867931 103868191 + 1.21398586181642 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 7784 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-22 chr4 89175847 89176202 + 1.21398586181642 NA intron (NM_024433, intron 6 of 7) intron (NM_024433, intron 6 of 7) 38654 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-8 chr11 31873785 31874005 + 1.21398586181642 NA intron (NM_026252, intron 1 of 9) intron (NM_026252, intron 1 of 9) 2955 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-58 chr6 35272246 35272546 + 1.21398586181642 NA intron (NM_172892, intron 13 of 15) intron (NM_172892, intron 13 of 15) 19664 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA unique_peak2_10_5_0.608322861022393_2.88912393123235_1.21398586181642 chr3 105048043 105048250 + 1.21398586181642 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 4807 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-6 chr18 64482981 64483210 + 1.21398586181642 NA intron (NM_001348055, intron 1 of 9) intron (NM_001348055, intron 1 of 9) 6003 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-57 chr5 151704907 151705133 + 1.21398586181642 NA Intergenic Intergenic -53812 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-4 chr11 96778097 96778337 + 1.21398586181642 NA promoter-TSS (NM_001163389) promoter-TSS (NM_001163389) -662 NM_001163389 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-37 chr9 45844184 45844394 + 1.21398586181642 NA intron (NM_011792, intron 1 of 8) B1_Mus1|SINE|Alu 5744 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-67 chr8 86894903 86895261 + 1.21398586181642 NA Intergenic RMER15|LTR|ERVL -9824 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-56 chr8 82382699 82382893 + 1.21398586181642 NA intron (NM_001254747, intron 1 of 7) intron (NM_001254747, intron 1 of 7) 19790 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-39 chr8 80032121 80032415 + 1.21398586181642 NA intron (NM_020259, intron 4 of 12) B4|SINE|B4 25740 NM_020259 15245 Mm.254493 NM_020259 ENSMUSG00000064325 Hhip Hhip1 Hedgehog-interacting protein protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-12 chr11 114874600 114874814 + 1.21398586181642 NA Intergenic Intergenic -15334 NM_001347654 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-20 chr13 102902351 102902578 + 1.21398586181642 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 142209 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-7 chr1 193520283 193520587 + 1.21398586181642 NA Intergenic Intergenic -12905 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-29 chr6 72961271 72961533 + 1.21398586181642 NA Intergenic Intergenic -2654 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-20 chr14 34378161 34378384 + 1.21398586181642 NA intron (NM_153127, intron 1 of 6) intron (NM_153127, intron 1 of 6) 2768 NM_153127 105450 Mm.272673 NM_153127 ENSMUSG00000041445 Mmrn2 AA986839|ENDOGLYX1|Emilin3|EndoGlyx-1 multimerin 2 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-43 chr9 88858571 88858846 + 1.21398586181642 NA promoter-TSS (NR_037982) promoter-TSS (NR_037982) 93 NR_037982 319673 Mm.149040 NR_037982 ENSMUSG00000097177 9330159M07Rik 1700096K11Rik|mU50hg-a RIKEN cDNA 9330159M07 gene ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-46 chr4 123564718 123564963 + 1.21398586181642 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -51580 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-8 chr11 60916481 60916756 + 1.21398586181642 NA Intergenic Intergenic -2826 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-53 chr5 105702555 105702838 + 1.21398586181642 NA intron (NM_178701, intron 1 of 2) intron (NM_178701, intron 1 of 2) 1886 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-30 chr3 145686806 145687095 + 1.21398586181642 NA Intergenic Intergenic -36965 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak2_10_5_0.608322861022393_2.88912393123235_1.21398586181642-2 chr3 145884861 145885064 + 1.21398586181642 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -39300 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-36 chr6 70709824 70710036 + 1.21398586181642 NA Intergenic Intergenic 82245 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-64 chr7 74522386 74522667 + 1.21398586181642 NA intron (NM_001038643, intron 1 of 10) intron (NM_001038643, intron 1 of 10) 32254 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-40 chr9 58455277 58455479 + 1.21398586181642 NA intron (NR_040736, intron 1 of 2) intron (NR_040736, intron 1 of 2) 205 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642 chr11 99499919 99500116 + 1.21398586181642 NA Intergenic Intergenic -6907 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-34 chr8 25439670 25439875 + 1.21398586181642 NA Intergenic Intergenic -78987 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-36 chr2 126064576 126064802 + 1.21398586181642 NA intron (NM_008008, intron 2 of 3) intron (NM_008008, intron 2 of 3) 30031 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-19 chr13 111745410 111745634 + 1.21398586181642 NA TTS (NM_011945) TTS (NM_011945) 59344 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-53 chr7 80744085 80744342 + 1.21398586181642 NA intron (NM_016721, intron 15 of 37) intron (NM_016721, intron 15 of 37) -55336 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-23 chr14 41017246 41017445 + 1.21398586181642 NA Intergenic Intergenic -3512 NM_001316737 70564 Mm.27227 NM_027464 ENSMUSG00000021792 Fam213a 5730469M10Rik|AU040822|Adrx|Pamm family with sequence similarity 213, member A protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-12 chr16 30443174 30443393 + 1.21398586181642 NA Intergenic Intergenic -54753 NM_001128096 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-15 chr12 100277202 100277422 + 1.21398586181642 NA intron (NR_045741, intron 1 of 3) intron (NR_045741, intron 1 of 3) 703 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-43 chr4 140871719 140871972 + 1.21398586181642 NA promoter-TSS (NR_040654) promoter-TSS (NR_040654) -848 NR_040654 75128 Mm.67085 NR_040654 ENSMUSG00000087045 4930515B02Rik - RIKEN cDNA 4930515B02 gene ncRNA unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-20 chr18 81252764 81252986 + 1.21398586181642 NA Intergenic Intergenic -266297 NM_178280 20689 Mm.215917 NM_178280 ENSMUSG00000024565 Sall3 B130022O04Rik|Msal|Msal-1|Sal|Salt|Spalt spalt like transcription factor 3 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-35 chr5 115122947 115123157 + 1.21398586181642 NA 3' UTR (NM_175352, exon 5 of 5) 3' UTR (NM_175352, exon 5 of 5) -3706 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-50 chr5 17556630 17556936 + 1.21398586181642 NA Intergenic Intergenic -18033 NM_013657 20348 Mm.5071 NM_013657 ENSMUSG00000028780 Sema3c 1110036B02Rik|SemE|Semae sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C protein-coding unique_peak2_5_9_-0.996942489295623_2.82345685023955_1.21398586181642-30 chr6 86180287 86180603 + 1.21398586181642 NA Intergenic Intergenic -14782 NM_031199 21802 Mm.137222 NM_031199 ENSMUSG00000029999 Tgfa wa-1|wa1 transforming growth factor alpha protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-5 chr10 16508592 16508862 + 1.21398586181642 NA Intergenic Intergenic 587055 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-21 chr14 43296833 43297028 + 1.21398586181642 NA Intergenic Intergenic 50881 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-27 chr17 6120132 6120374 + 1.21398586181642 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 13423 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-10 chr12 102586936 102587139 + 1.21398586181642 NA intron (NM_172584, intron 6 of 9) intron (NM_172584, intron 6 of 9) 32096 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-3 chr1 161251398 161251643 + 1.21398586181642 NA promoter-TSS (NM_007453) promoter-TSS (NM_007453) -310 NM_001303408 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding unique_peak1_10_5_0.608322861022393_2.88912393123235_1.21398586181642-8 chr10 62793266 62793486 + 1.21398586181642 NA Intergenic PB1D10|SINE|Alu -1008 NM_026201 67500 Mm.196371 NM_026201 ENSMUSG00000020074 Ccar1 2610511G16Rik|9430036H15Rik|Carp1 cell division cycle and apoptosis regulator 1 protein-coding unique_peak2_6_10_-0.913622565698883_3.00262033578786_1.21398586181642-44 chr9 108289998 108290219 + 1.21398586181642 NA promoter-TSS (NM_025449) promoter-TSS (NM_025449) -349 NM_025449 66257 Mm.10407 NM_025449 ENSMUSG00000032606 Nicn1 1500032A17Rik nicolin 1 protein-coding unique_peak1_11_6_0.510575703960891_3.06264277403805_1.21398586181642-41 chr2 157568382 157568618 + 1.21398586181642 NA Intergenic Intergenic -2139 NM_016916 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak1_189_121_0.343973056589651_7.10272386585771_1.21284517360846 chr15 98762102 98763501 + 1.21284517360846 NA 5' UTR (NM_001355510, exon 1 of 5) 5' UTR (NM_001355510, exon 1 of 5) 191 NM_001355510 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding common_peak1_104_115_-0.432844379927557_6.64155880516379_1.21277003021814 chr8 94997751 94998978 + 1.21277003021814 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 13965 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_83_47_0.52051721572498_5.84522110858365_1.21256932621262 chr14 52103246 52103973 + 1.21256932621262 NA intron (NM_001360183, intron 1 of 8) intron (NM_001360183, intron 1 of 8) 412 NM_001360178 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak2_83_47_0.52051721572498_5.84522110858365_1.21256932621262 chr3 153912292 153912902 + 1.21256932621262 NA promoter-TSS (NR_028095) promoter-TSS (NR_028095) 369 NM_001163478 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding common_peak2_56_69_-0.579283960172365_5.83964103685878_1.21256932621262 chr9 97110516 97111402 + 1.21256932621262 NA promoter-TSS (NM_138756) promoter-TSS (NM_138756) 82 NM_138756 192287 Mm.228067 NM_138756 ENSMUSG00000032449 Slc25a36 C330005L02Rik solute carrier family 25, member 36 protein-coding common_peak2_56_69_-0.579283960172365_5.83964103685878_1.21256932621262-2 chr9 107534091 107534848 + 1.21256932621262 NA 5' UTR (NM_019704, exon 1 of 2) 5' UTR (NM_019704, exon 1 of 2) 524 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding common_peak1_70_38_0.579218522844482_5.57501148028449_1.21247150569676 chr18 38185362 38186009 + 1.21247150569676 NA Intergenic Intergenic 24077 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak2_45_58_-0.639789747565587_5.56274817557905_1.21247150569676-2 chr7 66110003 66110899 + 1.21247150569676 NA intron (NM_001081163, intron 1 of 2) intron (NM_001081163, intron 1 of 2) 936 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_70_38_0.579218522844482_5.57501148028449_1.21247150569676-4 chr8 124520820 124521335 + 1.21247150569676 NA intron (NM_029746, intron 1 of 17) intron (NM_029746, intron 1 of 17) 310 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 protein-coding common_peak1_45_58_-0.639789747565587_5.56274817557905_1.21247150569676-2 chr15 99846729 99847113 + 1.21247150569676 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) -26772 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_70_38_0.579218522844482_5.57501148028449_1.21247150569676-3 chr8 24573600 24573994 + 1.21247150569676 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 2536 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak2_45_58_-0.639789747565587_5.56274817557905_1.21247150569676 chr7 48789112 48789771 + 1.21247150569676 NA intron (NM_028031, intron 1 of 16) intron (NM_028031, intron 1 of 16) 438 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding common_peak2_70_38_0.579218522844482_5.57501148028449_1.21247150569676-2 chr5 72913662 72914125 + 1.21247150569676 NA promoter-TSS (NM_001113423) promoter-TSS (NM_001113423) -469 NM_001113423 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak2_70_38_0.579218522844482_5.57501148028449_1.21247150569676 chr10 128096950 128097744 + 1.21247150569676 NA intron (NM_054078, intron 2 of 29) CpG 4564 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_45_58_-0.639789747565587_5.56274817557905_1.21247150569676 chr15 81925709 81926121 + 1.21247150569676 NA 5' UTR (NM_030229, exon 1 of 6) 5' UTR (NM_030229, exon 1 of 6) 298 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_70_38_0.579218522844482_5.57501148028449_1.21247150569676-3 chr7 123368927 123369855 + 1.21247150569676 NA intron (NM_001316713, intron 1 of 19) intron (NM_001316713, intron 1 of 19) 524 NM_001122643 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak1_70_38_0.579218522844482_5.57501148028449_1.21247150569676-2 chr7 113168362 113169112 + 1.21247150569676 NA Intergenic Intergenic -26722 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_209_211_-0.309838818936429_7.57300104509498_1.21221665190359 chr5 137075576 137078562 + 1.21221665190359 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -4797 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_177_182_-0.334447591457359_7.34847604255536_1.21207639522716 chr17 70753937 70756342 + 1.21207639522716 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 91638 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_69_81_-0.513250991645525_6.10092650879532_1.21200877642542 chr7 81788822 81789573 + 1.21200877642542 NA intron (NM_026077, intron 1 of 4) intron (NM_026077, intron 1 of 4) 256 NM_026077 67290 Mm.248391 NM_026077 ENSMUSG00000025102 3110040N11Rik AI851475 RIKEN cDNA 3110040N11 gene protein-coding common_peak2_68_81_-0.533863100594375_6.0906204543209_1.21200877642542 chr11 120597508 120598360 + 1.21200877642542 NA promoter-TSS (NM_025389) promoter-TSS (NM_025389) 431 NM_011568 21681 Mm.1886 NM_011568 ENSMUSG00000025134 Alyref Aly|Ref1|Ref1-I|Refbp1|Tho4|Thoc4 Aly/REF export factor protein-coding common_peak2_68_81_-0.533863100594375_6.0906204543209_1.21200877642542-2 chr9 65010968 65011984 + 1.21200877642542 NA intron (NM_021345, intron 1 of 10) intron (NM_021345, intron 1 of 10) 10241 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_68_81_-0.533863100594375_6.0906204543209_1.21200877642542 chr3 79885713 79886561 + 1.21200877642542 NA 5' UTR (NM_133187, exon 1 of 4) 5' UTR (NM_133187, exon 1 of 4) 207 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_98_57_0.482865611924397_6.09941380108977_1.21200877642541 chr8 64725724 64726750 + 1.21200877642541 NA intron (NM_025436, intron 2 of 5) intron (NM_025436, intron 2 of 5) 7341 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding common_peak2_32_14_0.86017538878924_4.33697829000314_1.21173582416604-2 chr15 102840154 102840385 + 1.21173582416604 NA Intergenic Intergenic -80862 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding common_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-2 chr13 30668298 30668821 + 1.21173582416604 NA intron (NM_134068, intron 1 of 7) intron (NM_134068, intron 1 of 7) 8500 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding common_peak2_32_14_0.86017538878924_4.33697829000314_1.21173582416604 chr1 171438559 171438884 + 1.21173582416604 NA intron (NM_172647, intron 1 of 9) intron (NM_172647, intron 1 of 9) 1160 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding common_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-3 chr15 75921817 75922262 + 1.21173582416604 NA promoter-TSS (NM_025412) promoter-TSS (NM_025412) -479 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-4 chr4 150871055 150871471 + 1.21173582416604 NA Intergenic Intergenic 16193 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-5 chr6 17489533 17490331 + 1.21173582416604 NA intron (NM_008591, intron 2 of 21) intron (NM_008591, intron 2 of 21) 25975 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-2 chr17 65939390 65939733 + 1.21173582416604 NA intron (NM_023053, intron 2 of 4) intron (NM_023053, intron 2 of 4) 11626 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-7 chrX 13072706 13073105 + 1.21173582416604 NA intron (NM_009481, intron 1 of 44) CpG 1407 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-4 chr6 91647901 91648350 + 1.21173582416604 NA Intergenic Intergenic -35942 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-3 chr17 5568312 5568571 + 1.21173582416604 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 75841 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-8 chr8 125012330 125012750 + 1.21173582416604 NA promoter-TSS (NM_016909) promoter-TSS (NM_016909) -457 NM_016909 53424 Mm.5248 NM_016909 ENSMUSG00000056820 Tsnax R74833|Trax translin-associated factor X protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-8 chr9 69431804 69432340 + 1.21173582416604 NA exon (NM_145618, exon 16 of 16) exon (NM_145618, exon 16 of 16) -21611 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-3 chr19 28591394 28591823 + 1.21173582416604 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -86616 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-7 chr8 70530578 70531131 + 1.21173582416604 NA intron (NM_001111066, intron 2 of 8) intron (NM_001111066, intron 2 of 8) 3008 NM_001199631 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-2 chr11 116843800 116844134 + 1.21173582416604 NA promoter-TSS (NM_033398) promoter-TSS (NM_033398) 452 NM_028865 74319 Mm.429312 NM_028865 ENSMUSG00000090266 Mettl23 1110005A03Rik|1500035B17Rik|4933424L15Rik methyltransferase like 23 protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604 chr11 44012449 44013139 + 1.21173582416604 NA Intergenic GA-rich|Low_complexity|Low_complexity -111557 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_32_14_0.86017538878924_4.33697829000314_1.21173582416604-3 chr7 74280790 74281019 + 1.21173582416604 NA intron (NM_001038643, intron 10 of 10) intron (NM_001038643, intron 10 of 10) -267222 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604 chr1 89112614 89113154 + 1.21173582416604 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 42469 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-6 chr6 99446283 99446759 + 1.21173582416604 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -11176 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604 chr11 94936117 94936605 + 1.21173582416604 NA 5' UTR (NM_007742, exon 1 of 51) 5' UTR (NM_007742, exon 1 of 51) 137 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-4 chr5 125105733 125106319 + 1.21173582416604 NA intron (NM_011424, intron 6 of 46) intron (NM_011424, intron 6 of 46) 73188 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-2 chr17 3557146 3557771 + 1.21173582416604 NA promoter-TSS (NR_045302) promoter-TSS (NR_045302) 255 NM_146074 224481 Mm.226554 NM_146074 ENSMUSG00000036983 Tfb1m AI429207 transcription factor B1, mitochondrial protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-5 chr6 30510010 30510498 + 1.21173582416604 NA promoter-TSS (NM_178625) promoter-TSS (NM_178625) 405 NM_027073 75647 Mm.46117 NM_027073 ENSMUSG00000029784 Ssmem1 1700016K02Rik|1700025E21Rik serine-rich single-pass membrane protein 1 protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-9 chr9 62787105 62787407 + 1.21173582416604 NA Intergenic Intergenic 24392 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding unique_peak1_32_14_0.86017538878924_4.33697829000314_1.21173582416604-4 chr5 36715547 36715990 + 1.21173582416604 NA Intergenic Intergenic -19747 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604 chr16 92683847 92684264 + 1.21173582416604 NA intron (NM_001111022, intron 4 of 6) intron (NM_001111022, intron 4 of 6) 13274 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-6 chr8 106563802 106564213 + 1.21173582416604 NA Intergenic Intergenic -23136 NR_045470 68692 Mm.416843 NR_045470 ENSMUSG00000099139 1110028F18Rik - RIKEN cDNA 1110028F18 gene ncRNA common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-6 chr7 130141967 130142484 + 1.21173582416604 NA Intergenic Intergenic 124583 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-5 chr6 66535544 66536139 + 1.21173582416604 NA intron (NM_001355624, intron 1 of 5) intron (NM_001355624, intron 1 of 5) 620 NM_001355624 56150 Mm.489653 NM_019499 ENSMUSG00000029910 Mad2l1 AA673185|MAD2 MAD2 mitotic arrest deficient-like 1 protein-coding common_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-7 chr8 25620319 25620795 + 1.21173582416604 NA intron (NM_001001735, intron 1 of 9) intron (NM_001001735, intron 1 of 9) 18273 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding unique_peak2_16_27_-0.990469085147908_4.31212037948365_1.21173582416604-3 chr2 157064364 157064887 + 1.21173582416604 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 14640 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak2_57_30_0.620716710990392_5.26455466588207_1.21120768321511 chr5 64867507 64867924 + 1.21120768321511 NA Intergenic Intergenic 64192 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_57_30_0.620716710990392_5.26455466588207_1.21120768321511-5 chr6 83109161 83109777 + 1.21120768321511 NA TTS (NM_001081266) TTS (NM_001081266) 361 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding common_peak2_58_30_0.645204774935805_5.27679869785478_1.21120768321511-3 chr8 46942345 46942858 + 1.21120768321511 NA Intergenic Intergenic -44286 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding unique_peak1_58_30_0.645204774935805_5.27679869785478_1.21120768321511 chr13 98476955 98477833 + 1.21120768321511 NA Intergenic Intergenic -42329 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA common_peak1_57_30_0.620716710990392_5.26455466588207_1.21120768321511-3 chr18 60653697 60654558 + 1.21120768321511 NA Intergenic Intergenic -9283 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_58_30_0.645204774935805_5.27679869785478_1.21120768321511 chr1 133024853 133025281 + 1.21120768321511 NA intron (NM_008575, intron 1 of 11) intron (NM_008575, intron 1 of 11) 349 NR_126506 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak1_58_30_0.645204774935805_5.27679869785478_1.21120768321511-3 chr5 32191245 32192030 + 1.21120768321511 NA Intergenic Intergenic -41071 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_57_30_0.620716710990392_5.26455466588207_1.21120768321511-2 chr17 66341321 66341982 + 1.21120768321511 NA intron (NM_001114098, intron 13 of 14) intron (NM_001114098, intron 13 of 14) 108099 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_57_30_0.620716710990392_5.26455466588207_1.21120768321511-6 chr8 111939977 111940513 + 1.21120768321511 NA promoter-TSS (NM_026693) promoter-TSS (NM_026693) -458 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding common_peak1_58_30_0.645204774935805_5.27679869785478_1.21120768321511-4 chr7 98308724 98309419 + 1.21120768321511 NA intron (NM_001360615, intron 1 of 10) CpG 471 NM_001360616 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca|aPHC alkaline ceramidase 3 protein-coding common_peak2_58_30_0.645204774935805_5.27679869785478_1.21120768321511 chr4 63215418 63216115 + 1.21120768321511 NA 5' UTR (NM_025685, exon 1 of 61) 5' UTR (NM_025685, exon 1 of 61) 354 NM_025685 373864 Mm.194116 NM_025685 ENSMUSG00000045672 Col27a1 5730512J02Rik|AI449266 collagen, type XXVII, alpha 1 protein-coding common_peak1_57_30_0.620716710990392_5.26455466588207_1.21120768321511-4 chr2 25983724 25984483 + 1.21120768321511 NA promoter-TSS (NM_001276361) promoter-TSS (NM_001276361) -821 NM_001276361 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak1_57_30_0.620716710990392_5.26455466588207_1.21120768321511 chr1 133130419 133131076 + 1.21120768321511 NA promoter-TSS (NM_133819) promoter-TSS (NM_133819) -419 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak1_58_30_0.645204774935805_5.27679869785478_1.21120768321511-2 chr4 95758778 95759437 + 1.21120768321511 NA intron (NM_029347, intron 7 of 10) intron (NM_029347, intron 7 of 10) 179686 NM_029347 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak2_58_30_0.645204774935805_5.27679869785478_1.21120768321511-2 chr6 30303043 30303657 + 1.21120768321511 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 1189 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_35_48_-0.722998595442504_5.25321054639396_1.2112076832151-4 chr16 16592500 16593222 + 1.2112076832151 NA intron (NM_001301817, intron 1 of 16) intron (NM_001301817, intron 1 of 16) 7117 NM_001301817 224014 Mm.256131 NM_139232 ENSMUSG00000022788 Fgd4 9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding common_peak2_35_48_-0.722998595442504_5.25321054639396_1.2112076832151-5 chr2 180223096 180223917 + 1.2112076832151 NA intron (NM_001081171, intron 1 of 78) intron (NM_001081171, intron 1 of 78) 2353 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak1_35_48_-0.722998595442504_5.25321054639396_1.2112076832151 chr13 30544705 30545274 + 1.2112076832151 NA intron (NM_025710, intron 1 of 1) CpG 327 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding common_peak2_35_48_-0.722998595442504_5.25321054639396_1.2112076832151-2 chr13 100491843 100492517 + 1.2112076832151 NA intron (NM_001360706, intron 1 of 16) CpG 214 NR_153794 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding common_peak2_35_48_-0.722998595442504_5.25321054639396_1.2112076832151 chr10 71153882 71154800 + 1.2112076832151 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 5349 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_35_48_-0.722998595442504_5.25321054639396_1.2112076832151-3 chr13 112770944 112771429 + 1.2112076832151 NA Intergenic Intergenic -29591 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak2_82_94_-0.48153198744003_6.32908961461093_1.21108123971855 chr2 60636950 60638568 + 1.21108123971855 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 35934 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_114_68_0.446930764198719_6.33198983887753_1.21108123971852 chr12 28635112 28636154 + 1.21108123971852 NA exon (NM_011300, exon 2 of 7) exon (NM_011300, exon 2 of 7) 320 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding common_peak1_114_68_0.446930764198719_6.33198983887753_1.21108123971852-2 chr18 38080758 38082194 + 1.21108123971852 NA Intergenic Intergenic -82507 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak2_114_68_0.446930764198719_6.33198983887753_1.21108123971852 chr14 20674383 20675080 + 1.21108123971852 NA intron (NM_172596, intron 1 of 22) intron (NM_172596, intron 1 of 22) 410 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak2_200_129_0.332965827266144_7.18885072666153_1.21106966988193 chr17 4995014 4997062 + 1.21106966988193 NA exon (NM_001085355, exon 1 of 20) exon (NM_001085355, exon 1 of 20) 964 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_62_75_-0.554557215196751_5.97064890584521_1.21053550697016 chr15 80159523 80160317 + 1.21053550697016 NA intron (NM_025609, intron 10 of 10) intron (NM_025609, intron 10 of 10) -13801 NM_010795 17309 Mm.299693 NM_010795 ENSMUSG00000042428 Mgat3 1110038J12Rik|AI848272|GnT-III mannoside acetylglucosaminyltransferase 3 protein-coding common_peak1_91_52_0.507877867659812_5.9818593883931_1.21053550697015 chr5 104407754 104409134 + 1.21053550697015 NA Intergenic GA-rich|Low_complexity|Low_complexity -26667 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_90_52_0.4922217898928_5.9740313495096_1.21053550697015 chr1 193396881 193398179 + 1.21053550697015 NA Intergenic Intergenic -27248 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_90_52_0.4922217898928_5.9740313495096_1.21053550697015-2 chr5 90223449 90224471 + 1.21053550697015 NA promoter-TSS (NM_001033310) promoter-TSS (NM_001033310) 36 NR_028088 231430 Mm.319697 NM_001033310 ENSMUSG00000035505 Cox18 BC038311 cytochrome c oxidase assembly protein 18 protein-coding common_peak1_131_80_0.413106022366645_6.54640301406795_1.20995807086667 chr15 89176664 89177743 + 1.20995807086667 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) -3252 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak2_97_108_-0.441881160984115_6.54724374428487_1.20995807086665 chr2 91265203 91266331 + 1.20995807086665 NA intron (NM_023854, intron 2 of 15) intron (NM_023854, intron 2 of 15) 652 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding common_peak1_179_114_0.35176813733572_7.02137411961223_1.20948770901142 chr12 100199583 100201314 + 1.20948770901142 NA intron (NM_001313934, intron 1 of 5) CpG 304 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1 calmodulin 1 protein-coding common_peak2_63_34_0.586647068126341_5.42260655100814_1.20936890888905-3 chr7 35646816 35647426 + 1.20936890888905 NA intron (NM_019746, intron 1 of 5) CpG 361 NM_019746 56330 Mm.371609 NM_019746 ENSMUSG00000030417 Pdcd5 2200003D22Rik|AA408513|Tfar19 programmed cell death 5 protein-coding common_peak2_63_34_0.586647068126341_5.42260655100814_1.20936890888905-2 chr6 34797093 34797873 + 1.20936890888905 NA intron (NM_001289656, intron 6 of 19) intron (NM_001289656, intron 6 of 19) 17051 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak1_64_34_0.608857076690781_5.43371155529036_1.20936890888905 chr8 123331718 123332458 + 1.20936890888905 NA promoter-TSS (NM_172287) promoter-TSS (NM_172287) -625 NM_172287 234857 Mm.150200 NM_172287 ENSMUSG00000010154 Spire2 BC026502|Spir-2|Spir2 spire type actin nucleation factor 2 protein-coding common_peak2_63_34_0.586647068126341_5.42260655100814_1.20936890888905 chr1 171437677 171438253 + 1.20936890888905 NA promoter-TSS (NR_151523) promoter-TSS (NR_151523) 404 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding common_peak1_63_34_0.586647068126341_5.42260655100814_1.20936890888905-2 chr19 10134471 10135268 + 1.20936890888905 NA Intergenic Intergenic -33366 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_63_34_0.586647068126341_5.42260655100814_1.20936890888905 chr1 74278876 74279708 + 1.20936890888905 NA TTS (NM_001190444) TTS (NM_001190444) 692 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak1_63_34_0.586647068126341_5.42260655100814_1.20936890888905-3 chr7 19665215 19665801 + 1.20936890888905 NA promoter-TSS (NM_019649) promoter-TSS (NM_019649) -478 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding common_peak1_40_53_-0.676872954989786_5.41645102466858_1.20936890888904 chr6 71632458 71632806 + 1.20936890888904 NA promoter-TSS (NM_173001) promoter-TSS (NM_173001) 54 NM_173001 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak2_40_53_-0.676872954989786_5.41645102466858_1.20936890888904 chr2 113818446 113819120 + 1.20936890888904 NA intron (NM_009162, intron 2 of 5) intron (NM_009162, intron 2 of 5) 10308 NM_009162 20394 Mm.4836 NM_009162 ENSMUSG00000023236 Scg5 7B2|AI325031|Sgne-1|Sgne1 secretogranin V protein-coding common_peak2_40_53_-0.676872954989786_5.41645102466858_1.20936890888904-2 chr7 127421407 127422022 + 1.20936890888904 NA intron (NM_026999, intron 1 of 2) intron (NM_026999, intron 1 of 2) 320 NM_026999 69234 Mm.20301 NM_026999 ENSMUSG00000045251 Zfp688 2810407K09Rik|AI326029 zinc finger protein 688 protein-coding common_peak2_123_74_0.434575869483657_6.44610662523771_1.20922672889828 chr18 46280148 46281092 + 1.20922672889828 NA intron (NM_172627, intron 1 of 8) CpG 230 NM_172627 225467 Mm.262096 NM_172627 ENSMUSG00000024477 Pggt1b 2010207C17Rik|2610100E13|AI451237|AI551093|BGG1|GGT1 protein geranylgeranyltransferase type I, beta subunit protein-coding common_peak2_123_74_0.434575869483657_6.44610662523771_1.20922672889828-2 chr6 35538993 35539736 + 1.20922672889828 NA intron (NM_008098, intron 1 of 3) CpG 524 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak2_27_39_-0.790229001095438_4.92681359433964_1.20786488037717 chr17 13919901 13920787 + 1.20786488037717 NA Intergenic Intergenic -28029 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding common_peak1_46_23_0.688698802580898_4.92931190201161_1.20786488037717-2 chr2 94288426 94289197 + 1.20786488037717 NA Intergenic Intergenic -27412 NR_030431 735259 NR_030431 ENSMUSG00000076335 Mir670 Mirn670|mir-670|mmu-mir-670 microRNA 670 ncRNA common_peak1_46_23_0.688698802580898_4.92931190201161_1.20786488037717 chr13 34163053 34163615 + 1.20786488037717 NA intron (NM_001110515, intron 1 of 1) intron (NM_001110515, intron 1 of 1) 370 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak2_46_23_0.688698802580898_4.92931190201161_1.20786488037717 chr1 39759171 39759652 + 1.20786488037717 NA Intergenic Intergenic -38422 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding common_peak1_46_23_0.688698802580898_4.92931190201161_1.20786488037717-3 chr3 152813600 152814002 + 1.20786488037717 NA Intergenic Intergenic 99701 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak1_46_23_0.688698802580898_4.92931190201161_1.20786488037717-4 chr5 111205975 111206488 + 1.20786488037717 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -124466 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_46_23_0.688698802580898_4.92931190201161_1.20786488037717-2 chr5 111205991 111206497 + 1.20786488037717 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -124453 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_46_23_0.688698802580898_4.92931190201161_1.20786488037717-6 chr9 44232850 44233464 + 1.20786488037717 NA intron (NM_007619, intron 1 of 15) intron (NM_007619, intron 1 of 15) 889 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak1_46_23_0.688698802580898_4.92931190201161_1.20786488037717-5 chr8 25521134 25521653 + 1.20786488037717 NA intron (NM_001079908, intron 1 of 17) intron (NM_001079908, intron 1 of 17) 2634 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_27_39_-0.790229001095438_4.92681359433964_1.20786488037717-2 chr2 127292727 127293268 + 1.20786488037717 NA intron (NM_139308, intron 6 of 7) intron (NM_139308, intron 6 of 7) 22768 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak2_27_39_-0.790229001095438_4.92681359433964_1.20786488037717-3 chr5 149353393 149353852 + 1.20786488037717 NA Intergenic Intergenic -58127 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_130_139_-0.387220708502576_6.93567266269368_1.20749402920881 chr15 11994800 11996047 + 1.20749402920881 NA intron (NM_011294, intron 1 of 4) CpG 584 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak2_148_156_-0.368123352366361_7.11055907270845_1.20625221064085 chr6 34596935 34598189 + 1.20625221064085 NA promoter-TSS (NM_001347100) promoter-TSS (NM_001347100) -942 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_213_138_0.326169984732408_7.28202606508971_1.20503843361496 chr3 107757722 107759697 + 1.20503843361496 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 1760 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_202_130_0.336094089840702_7.2014700464578_1.20487059816359 chr15 85653461 85655081 + 1.20487059816359 NA Intergenic Intergenic -49502 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592-7 chr7 145215523 145215752 + 1.20411998265592 NA intron (NR_132644, intron 24 of 24) intron (NR_132644, intron 24 of 24) -7518 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592-6 chr7 25204599 25204797 + 1.20411998265592 NA intron (NM_207677, intron 4 of 4) intron (NM_207677, intron 4 of 4) 13027 NR_106015 102466794 NR_106015 ENSMUSG00000098325 Mir7048 Gm27274|mmu-mir-7048 microRNA 7048 ncRNA unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592-2 chr2 145754875 145755096 + 1.20411998265592 NA Intergenic MTD|LTR|ERVL-MaLR -31131 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592-5 chr4 116465377 116465574 + 1.20411998265592 NA Intergenic L2|LINE|L2 -1294 NM_008641 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592-3 chr3 54688470 54688713 + 1.20411998265592 NA Intergenic Intergenic -4224 NR_152185 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592 chr13 49295456 49295644 + 1.20411998265592 NA intron (NM_015759, intron 3 of 17) L1M4c|LINE|L1 13658 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding unique_peak1_3_0_1.74415000336428_0.872075001682142_1.20411998265592-4 chr3 121541432 121541629 + 1.20411998265592 NA Intergenic B2_Mm2|SINE|B2 -9186 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak1_76_88_-0.494898978795208_6.22828394156879_1.20397006444706 chr5 74535459 74536108 + 1.20397006444706 NA intron (NM_024183, intron 1 of 16) CpG 301 NM_001159574 66899 Mm.272468 NM_024183 ENSMUSG00000029227 Fip1l1 1300019H17Rik|Rje FIP1 like 1 (S. cerevisiae) protein-coding common_peak1_106_63_0.452166037029158_6.22608301851458_1.20397006444706 chr13 108214560 108215479 + 1.20397006444706 NA intron (NM_029001, intron 1 of 7) CpG 615 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak2_106_63_0.452166037029158_6.22608301851458_1.20397006444706 chr3 121371021 121371916 + 1.20397006444706 NA Intergenic Intergenic -55073 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_106_63_0.452166037029158_6.22608301851458_1.20397006444706-2 chr15 98917495 98918719 + 1.20397006444706 NA promoter-TSS (NM_029098) promoter-TSS (NM_029098) -9 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding common_peak1_106_63_0.452166037029158_6.22608301851458_1.20397006444706-3 chr19 45048286 45049595 + 1.20397006444706 NA intron (NM_001362381, intron 1 of 10) intron (NM_001362381, intron 1 of 10) 1364 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_223_223_-0.296820766985411_7.6589445385649_1.20387091065906 chr8 36640909 36642968 + 1.20387091065906 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -27995 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_236_155_0.305946070067238_7.43837525389587_1.20386544821481 chr16 85172337 85174018 + 1.20386544821481 NA intron (NM_001198825, intron 1 of 15) CpG 530 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_141_87_0.398134143496191_6.65849869038539_1.20372514721227 chr4 86575218 86576454 + 1.20372514721227 NA 5' UTR (NM_178376, exon 1 of 1) 5' UTR (NM_178376, exon 1 of 1) 163 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding common_peak2_105_116_-0.431649643886789_6.65453989764001_1.20372514721225 chr18 34758752 34760081 + 1.20372514721225 NA promoter-TSS (NM_001357456) promoter-TSS (NM_001357456) 89 NM_001357457 66306 Mm.29424 NM_175104 ENSMUSG00000034300 Fam53c 2810012G03Rik|Gm21179 family with sequence similarity 53, member C protein-coding common_peak2_200_203_-0.317091701676897_7.51387949113305_1.20267960003291 chr8 79208632 79210468 + 1.20267960003291 NA TTS (NM_026315) TTS (NM_026315) 39033 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding common_peak2_357_243_0.251485255200377_8.05647996516307_1.20215914849013 chr8 26977359 26979416 + 1.20215914849013 NA exon (NM_001110508, exon 2 of 3) exon (NM_001110508, exon 2 of 3) 1051 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak2_51_64_-0.603884618146585_5.72042550395516_1.20183724428356 chr1 131526542 131527307 + 1.20183724428356 NA promoter-TSS (NM_175382) promoter-TSS (NM_175382) 437 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak1_51_64_-0.603884618146585_5.72042550395516_1.20183724428356 chr11 79070966 79071602 + 1.20183724428356 NA intron (NM_013571, intron 2 of 17) intron (NM_013571, intron 2 of 17) -11448 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak2_51_64_-0.603884618146585_5.72042550395516_1.20183724428356-2 chr9 45938354 45939344 + 1.20183724428356 NA TTS (NR_106055) TTS (NR_106055) 741 NR_106055 102465659 NR_106055 ENSMUSG00000098327 Mir7087 Gm27273|mmu-mir-7087 microRNA 7087 ncRNA common_peak1_77_43_0.539887178472027_5.72937520787331_1.20183724428354-2 chr7 141392199 141393070 + 1.20183724428354 NA intron (NM_011528, intron 1 of 7) intron (NM_011528, intron 1 of 7) 474 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding unique_peak1_77_43_0.539887178472027_5.72937520787331_1.20183724428354 chr8 14600796 14601693 + 1.20183724428354 NA intron (NM_172910, intron 4 of 15) intron (NM_172910, intron 4 of 15) -287292 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding common_peak1_77_43_0.539887178472027_5.72937520787331_1.20183724428354 chr7 28917290 28918454 + 1.20183724428354 NA intron (NM_021895, intron 3 of 20) intron (NM_021895, intron 3 of 20) 36216 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding common_peak2_77_43_0.539887178472027_5.72937520787331_1.20183724428354 chr7 126799538 126800108 + 1.20183724428354 NA promoter-TSS (NM_007438) promoter-TSS (NM_007438) -569 NM_007438 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding common_peak2_36_17_0.76103573961513_4.55044287124988_1.20073456579999-2 chr18 57485812 57486160 + 1.20073456579999 NA Intergenic Intergenic 17500 NM_001134697 629147 Mm.57415 NM_001134697 ENSMUSG00000069372 Ctxn3 - cortexin 3 protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-3 chr3 121291242 121291538 + 1.20073456579999 NA promoter-TSS (NM_024178) promoter-TSS (NM_024178) -350 NR_155539 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-3 chr17 79742577 79743205 + 1.20073456579999 NA Intergenic Intergenic -27850 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-2 chr16 3908746 3909219 + 1.20073456579999 NA promoter-TSS (NM_029738) promoter-TSS (NM_029738) -27 NM_029738 76779 Mm.458921 NM_029738 ENSMUSG00000014232 Cluap1 2310030D15Rik|2610111M03Rik clusterin associated protein 1 protein-coding common_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999 chr11 53798161 53798582 + 1.20073456579999 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 27898 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-8 chr7 123385626 123386058 + 1.20073456579999 NA intron (NM_025304, intron 1 of 10) intron (NM_025304, intron 1 of 10) 7860 NM_025304 30949 Mm.260527 NM_025304 ENSMUSG00000030763 Lcmt1 AL033290|LCMT-1|Lcmt leucine carboxyl methyltransferase 1 protein-coding unique_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999-4 chr9 109095216 109095749 + 1.20073456579999 NA promoter-TSS (NM_172775) promoter-TSS (NM_172775) 46 NM_172775 235611 Mm.53862 NM_172775 ENSMUSG00000053646 Plxnb1 2900002G15Rik|AU042020|mKIAA0407 plexin B1 protein-coding unique_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-2 chr16 95766662 95767141 + 1.20073456579999 NA Intergenic Intergenic 64494 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-4 chr8 4312878 4313171 + 1.20073456579999 NA intron (NM_010485, intron 1 of 5) intron (NM_010485, intron 1 of 5) 12076 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-7 chr5 35973043 35973717 + 1.20073456579999 NA intron (NM_027373, intron 9 of 16) intron (NM_027373, intron 9 of 16) 80061 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-4 chr3 121727063 121727500 + 1.20073456579999 NA intron (NM_010171, intron 2 of 5) intron (NM_010171, intron 2 of 5) 3744 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999-2 chr15 77903332 77903814 + 1.20073456579999 NA Intergenic Intergenic 25421 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-3 chr16 34858846 34859176 + 1.20073456579999 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 74061 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak2_37_17_0.799238453102835_4.56954422799373_1.20073456579999-2 chr19 45055053 45055387 + 1.20073456579999 NA non-coding (NR_155547, exon 11 of 11) non-coding (NR_155547, exon 11 of 11) 7644 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999 chr11 101170725 101171206 + 1.20073456579999 NA 5' UTR (NM_001346769, exon 1 of 13) 5' UTR (NM_001346769, exon 1 of 13) 337 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999 chr1 159889026 159889431 + 1.20073456579999 NA intron (NM_022312, intron 13 of 22) intron (NM_022312, intron 13 of 22) -155152 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999 chr12 99883931 99884269 + 1.20073456579999 NA promoter-TSS (NM_028354) promoter-TSS (NM_028354) -415 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding unique_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-4 chr2 102693316 102693867 + 1.20073456579999 NA intron (NM_001077514, intron 1 of 10) intron (NM_001077514, intron 1 of 10) -12847 NM_011393 20511 Mm.267547 NM_011393 ENSMUSG00000005089 Slc1a2 1700091C19Rik|2900019G14Rik|AI159670|Eaat2|GLT-1|GLT1|MGLT1 solute carrier family 1 (glial high affinity glutamate transporter), member 2 protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-6 chr7 84544267 84544915 + 1.20073456579999 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 15637 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_36_17_0.76103573961513_4.55044287124988_1.20073456579999-3 chr7 144581078 144581410 + 1.20073456579999 NA intron (NM_010175, intron 1 of 1) intron (NM_010175, intron 1 of 1) 1192 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-9 chr8 86871620 86872329 + 1.20073456579999 NA intron (NM_030563, intron 1 of 6) B1_Mur1|SINE|Alu 13284 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-2 chr10 78334915 78335580 + 1.20073456579999 NA intron (NM_053014, intron 1 of 9) intron (NM_053014, intron 1 of 9) 4960 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-4 chr4 40143565 40143880 + 1.20073456579999 NA intron (NM_007386, intron 1 of 20) CpG 457 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding unique_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999-2 chr4 10919490 10920045 + 1.20073456579999 NA Intergenic Intergenic 45269 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-5 chr17 25257451 25257941 + 1.20073456579999 NA Intergenic Intergenic -1332 NM_001163270 545192 Mm.328859 NM_001163270 ENSMUSG00000047507 Baiap3 Bap3|Gm937 BAI1-associated protein 3 protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999 chr1 138507611 138508119 + 1.20073456579999 NA intron (NM_021605, intron 7 of 9) intron (NM_021605, intron 7 of 9) 111892 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_36_17_0.76103573961513_4.55044287124988_1.20073456579999 chr15 85523091 85523367 + 1.20073456579999 NA Intergenic Intergenic -20002 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-5 chr6 31091378 31092119 + 1.20073456579999 NA Intergenic Intergenic -28655 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-5 chr9 69884108 69885004 + 1.20073456579999 NA Intergenic Intergenic -104910 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding unique_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999 chr10 68091352 68091857 + 1.20073456579999 NA Intergenic Intergenic 112034 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-7 chr8 111718740 111719343 + 1.20073456579999 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 13095 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-3 chr9 77917459 77917859 + 1.20073456579999 NA intron (NM_134255, intron 1 of 7) CpG 294 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding unique_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-3 chr3 27647653 27648104 + 1.20073456579999 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 62574 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999-3 chr9 20652211 20652618 + 1.20073456579999 NA intron (NM_023371, intron 1 of 3) CpG 284 NM_023371 23988 Mm.7906 NM_023371 ENSMUSG00000032171 Pin1 0610025L01Rik|D9Bwg1161e protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 protein-coding common_peak1_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-2 chr16 45969335 45969656 + 1.20073456579999 NA non-coding (NR_152226, exon 3 of 3) non-coding (NR_152226, exon 3 of 3) 23889 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak2_20_31_-0.880410324407376_4.55979483779631_1.20073456579999-2 chr19 28360210 28360715 + 1.20073456579999 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -317762 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-3 chr13 72077652 72078238 + 1.20073456579999 NA Intergenic Intergenic -114222 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-8 chr8 121956135 121956542 + 1.20073456579999 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 5846 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-3 chr4 118179775 118180021 + 1.20073456579999 NA 5' UTR (NM_172382, exon 1 of 19) 5' UTR (NM_172382, exon 1 of 19) 145 NM_172382 230674 Mm.234234 NM_172382 ENSMUSG00000033326 Kdm4a D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677 lysine (K)-specific demethylase 4A protein-coding unique_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999 chr13 119755091 119755675 + 1.20073456579999 NA intron (NM_175538, intron 1 of 3) intron (NM_175538, intron 1 of 3) 499 NM_175538 245269 Mm.403943 NM_175538 ENSMUSG00000095930 Nim1k E130304F04Rik|Nim1 NIM1 serine/threonine protein kinase protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-2 chr2 165326146 165326387 + 1.20073456579999 NA intron (NM_080287, intron 1 of 20) CpG 213 NM_080287 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak2_37_17_0.799238453102835_4.56954422799373_1.20073456579999 chr14 55578588 55578866 + 1.20073456579999 NA intron (NM_011189, intron 1 of 10) intron (NM_011189, intron 1 of 10) 233 NM_011189 19186 Mm.830 NM_011189 ENSMUSG00000022216 Psme1 AW413925|PA28a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) protein-coding common_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-5 chr6 34029638 34030063 + 1.20073456579999 NA intron (NM_028886, intron 1 of 19) intron (NM_028886, intron 1 of 19) 402 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak2_19_31_-0.950303057028326_4.52484847148584_1.20073456579999-3 chr6 87839011 87839399 + 1.20073456579999 NA promoter-TSS (NM_133934) promoter-TSS (NM_133934) -446 NM_133934 57905 Mm.241546 NM_133934 ENSMUSG00000030056 Isy1 5830446M03Rik|AI181014|AU020769 ISY1 splicing factor homolog protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-6 chr2 152687158 152687623 + 1.20073456579999 NA TTS (NM_001159552) TTS (NM_001159552) 242 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak1_36_17_0.76103573961513_4.55044287124988_1.20073456579999-4 chr13 93498731 93499179 + 1.20073456579999 NA exon (NM_021310, exon 1 of 11) exon (NM_021310, exon 1 of 11) 853 NM_021310 57748 Mm.100273 NM_021310 ENSMUSG00000021690 Jmy - junction-mediating and regulatory protein protein-coding common_peak1_20_31_-0.880410324407376_4.55979483779631_1.20073456579999 chr13 104468600 104468844 + 1.20073456579999 NA intron (NR_136938, intron 23 of 26) intron (NR_136938, intron 23 of 26) 180887 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-2 chr2 127255913 127256399 + 1.20073456579999 NA exon (NM_175145, exon 3 of 4) exon (NM_175145, exon 3 of 4) 8181 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding common_peak1_19_31_-0.950303057028326_4.52484847148584_1.20073456579999 chr17 33999790 34000060 + 1.20073456579999 NA exon (NM_001347346, exon 2 of 8) exon (NM_001347346, exon 2 of 8) 408 NM_001001892 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding common_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999 chr13 107022550 107022847 + 1.20073456579999 NA promoter-TSS (NM_001145779) promoter-TSS (NM_001145779) 128 NR_015471 100040322 Mm.133867 NR_015471 ENSMUSG00000071181 3830408C21Rik - RIKEN cDNA 3830408C21 gene ncRNA unique_peak1_37_17_0.799238453102835_4.56954422799373_1.20073456579999-4 chr3 108653959 108654464 + 1.20073456579999 NA 5' UTR (NM_001177770, exon 1 of 11) 5' UTR (NM_001177770, exon 1 of 11) 271 NM_001177770 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding unique_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879-2 chr14 73382586 73383252 + 1.20071330053879 NA intron (NM_008410, intron 1 of 5) intron (NM_008410, intron 1 of 5) 2370 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding unique_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-3 chr3 15204522 15205115 + 1.20071330053879 NA Intergenic Intergenic 127484 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-5 chr5 103737249 103737699 + 1.20071330053879 NA Intergenic Intergenic -16688 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_41_20_0.720217273240619_4.75242605939907_1.20071330053879-3 chr9 65542005 65542299 + 1.20071330053879 NA Intergenic Intergenic 37935 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879-4 chr8 25092707 25093264 + 1.20071330053879 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 8826 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879-3 chr4 56801634 56802010 + 1.20071330053879 NA promoter-TSS (NM_001081420) promoter-TSS (NM_001081420) -507 NM_001081420 230234 Mm.268148 NM_001081420 ENSMUSG00000038827 Fam206a simiate family with sequence similarity 206, member A protein-coding common_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879 chr1 92131645 92132297 + 1.20071330053879 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 48370 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_41_20_0.720217273240619_4.75242605939907_1.20071330053879-2 chr4 89311210 89311693 + 1.20071330053879 NA promoter-TSS (NM_007670) promoter-TSS (NM_007670) -419 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_41_20_0.720217273240619_4.75242605939907_1.20071330053879 chr4 32569757 32570005 + 1.20071330053879 NA intron (NR_026843, intron 1 of 4) intron (NR_026843, intron 1 of 4) 1781 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-2 chr14 55578590 55578921 + 1.20071330053879 NA intron (NM_011189, intron 1 of 10) intron (NM_011189, intron 1 of 10) 261 NM_011189 19186 Mm.830 NM_011189 ENSMUSG00000022216 Psme1 AW413925|PA28a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) protein-coding common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-3 chr15 37616538 37617151 + 1.20071330053879 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 63730 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879-3 chr3 80977155 80977893 + 1.20071330053879 NA Intergenic Intergenic -58892 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-2 chr15 101988538 101989249 + 1.20071330053879 NA Intergenic B3|SINE|B2 15449 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding unique_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-5 chr9 82976398 82977234 + 1.20071330053879 NA Intergenic Intergenic -1327 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-4 chr5 21494023 21494560 + 1.20071330053879 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -49236 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak2_42_20_0.753925107430671_4.7692799764941_1.20071330053879 chr14 70106198 70106588 + 1.20071330053879 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 6300 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding unique_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879 chr14 65105877 65106623 + 1.20071330053879 NA Intergenic Intergenic -8144 NM_001360385 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879 chr12 76553700 76554119 + 1.20071330053879 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -5984 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879 chr10 81401173 81401677 + 1.20071330053879 NA intron (NM_026756, intron 8 of 8) intron (NM_026756, intron 8 of 8) -8150 NR_152732 102634174 Mm.392213 NR_152732 ENSMUSG00000085327 Gm16104 - predicted gene 16104 ncRNA common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-6 chr6 146979101 146979398 + 1.20071330053879 NA intron (NM_001355729, intron 5 of 27) intron (NM_001355729, intron 5 of 27) -24828 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-4 chr5 74896478 74897112 + 1.20071330053879 NA Intergenic Intergenic -52399 NR_045866 619945 Mm.359372 NM_001037908 ENSMUSG00000072874 Gm6116 EG619945 predicted gene 6116 ncRNA common_peak1_42_20_0.753925107430671_4.7692799764941_1.20071330053879-2 chr18 57485763 57486193 + 1.20071330053879 NA Intergenic Intergenic 17492 NM_001134697 629147 Mm.57415 NM_001134697 ENSMUSG00000069372 Ctxn3 - cortexin 3 protein-coding common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-7 chr7 143979172 143979575 + 1.20071330053879 NA Intergenic CpG -29881 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_41_20_0.720217273240619_4.75242605939907_1.20071330053879-8 chr8 46947915 46948189 + 1.20071330053879 NA Intergenic Intergenic -38835 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878-5 chr2 163359170 163359650 + 1.20071330053878 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 38563 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878-2 chr12 79975586 79975949 + 1.20071330053878 NA Intergenic Intergenic -39503 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_23_35_-0.859049354997063_4.74040032394378_1.20071330053878 chr1 40543052 40543345 + 1.20071330053878 NA intron (NM_010553, intron 11 of 12) intron (NM_010553, intron 11 of 12) 27836 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878-7 chr7 110702623 110703014 + 1.20071330053878 NA Intergenic Intergenic -65388 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878-6 chr7 67647464 67648198 + 1.20071330053878 NA 5' UTR (NM_001168475, exon 1 of 11) 5' UTR (NM_001168475, exon 1 of 11) 421 NM_001360653 67009 Mm.249356 NM_025905 ENSMUSG00000030555 Ttc23 1600012K10Rik tetratricopeptide repeat domain 23 protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878 chr1 44119407 44119984 + 1.20071330053878 NA promoter-TSS (NM_023645) promoter-TSS (NM_023645) 167 NM_001357048 246229 Mm.386883 NM_144558 ENSMUSG00000041684 Bivm AI854267 basic, immunoglobulin-like variable motif containing protein-coding unique_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878 chr17 46111005 46111453 + 1.20071330053878 NA intron (NM_026768, intron 1 of 5) CpG 225 NM_026768 68565 Mm.287443 NM_026768 ENSMUSG00000023967 Mrps18a 1110004O20Rik|C79712 mitochondrial ribosomal protein S18A protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878-4 chr14 30635412 30636106 + 1.20071330053878 NA Intergenic Intergenic -9551 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak2_23_35_-0.859049354997063_4.74040032394378_1.20071330053878-3 chr13 95326908 95327381 + 1.20071330053878 NA intron (NM_001302539, intron 1 of 1) intron (NM_001302539, intron 1 of 1) 377 NM_001302539 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding common_peak2_247_245_-0.286174924932946_7.79942704287277_1.20064251501649 chr18 80553415 80556154 + 1.20064251501649 NA Intergenic Intergenic -10238 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_114_124_-0.410329063685198_6.76061975281949_1.20036064309685 chr4 155891142 155892949 + 1.20036064309685 NA promoter-TSS (NM_001033490) promoter-TSS (NM_001033490) 170 NM_207223 140500 Mm.219591 NM_207223 ENSMUSG00000029033 Acap3 Centb5|Kiaa1716-hp|mKIAA1716 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding common_peak1_133_81_0.41694603344906_6.56602502134261_1.2003197954815 chr3 87929509 87930835 + 1.2003197954815 NA promoter-TSS (NM_177663) promoter-TSS (NM_177663) 23 NM_153562 229503 Mm.296008 NM_153562 ENSMUSG00000004896 Rrnad1 - ribosomal RNA adenine dimethylase domain containing 1 protein-coding common_peak2_98_109_-0.440513106472691_6.56110316028831_1.2003197954815 chr8 31371877 31373061 + 1.2003197954815 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 4720 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_115_69_0.438575024859055_6.34857052937449_1.19988796804558-2 chr7 16046444 16047601 + 1.19988796804558 NA Intergenic Intergenic -24823 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_115_69_0.438575024859055_6.34857052937449_1.19988796804558 chr16 32867202 32868322 + 1.19988796804558 NA intron (NM_172615, intron 1 of 18) intron (NM_172615, intron 1 of 18) 604 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak2_83_95_-0.47948278427502_6.34522110858365_1.19988796804558 chr11 101315572 101316882 + 1.19988796804558 NA promoter-TSS (NM_011192) promoter-TSS (NM_011192) 14 NM_011192 19192 Mm.288477 NM_011192 ENSMUSG00000078652 Psme3 AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) protein-coding common_peak1_192_123_0.342956060083317_7.12567434042853_1.19975414105294 chr18 10725583 10726930 + 1.19975414105294 NA 5' UTR (NM_144860, exon 1 of 21) 5' UTR (NM_144860, exon 1 of 21) 631 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding common_peak1_123_132_-0.391887875521652_6.85933849774036_1.1993070575283 chr7 110061745 110062612 + 1.1993070575283 NA intron (NM_009281, intron 1 of 15) CpG 476 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak2_90_102_-0.46635828272722_6.45332138581961_1.19888335624195 chr7 99979566 99980456 + 1.19888335624195 NA exon (NM_175388, exon 1 of 6) exon (NM_175388, exon 1 of 6) 447 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak2_91_102_-0.450702204960208_6.46114942470311_1.19888335624195 chr8 24398276 24399576 + 1.19888335624195 NA Intergenic Intergenic 40020 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_191_194_-0.317619606024093_7.44852051073756_1.19868590522079 chr5 93092683 93094823 + 1.19868590522079 NA intron (NM_001009818, intron 1 of 9) CpG 337 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_57_70_-0.574834098127416_5.86233007044097_1.19693481691711 chr17 14978100 14978794 + 1.19693481691711 NA promoter-TSS (NM_001123370) promoter-TSS (NM_001123370) 365 NM_001360662 100041639 Mm.440445 NM_001123367 ENSMUSG00000079710 Gm3448 - predicted gene 3448 protein-coding common_peak1_84_48_0.507722932401878_5.86857131031615_1.19693481691711 chr2 167503424 167504121 + 1.19693481691711 NA intron (NR_153838, intron 1 of 4) CpG 329 NM_001360930 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding common_peak2_58_70_-0.550346034182002_5.87457410241368_1.19693481691711-2 chr6 30508800 30509702 + 1.19693481691711 NA promoter-TSS (NM_027073) promoter-TSS (NM_027073) 522 NM_001347087 72649 Mm.45418 NM_178625 ENSMUSG00000029782 Tmem209 2700094F01Rik|AI428435 transmembrane protein 209 protein-coding common_peak1_58_70_-0.550346034182002_5.87457410241368_1.19693481691711 chr11 88179909 88180738 + 1.19693481691711 NA intron (NM_001172099, intron 2 of 9) intron (NM_001172099, intron 2 of 9) 10758 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_58_70_-0.550346034182002_5.87457410241368_1.19693481691711 chr12 17420334 17421828 + 1.19693481691711 NA intron (NM_001008421, intron 19 of 20) intron (NM_001008421, intron 19 of 20) 65689 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak2_85_48_0.52447770652098_5.8769486973757_1.19693481691711 chr5 121711875 121712767 + 1.19693481691711 NA intron (NM_009125, intron 1 of 24) CpG 712 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding common_peak2_57_70_-0.574834098127416_5.86233007044097_1.19693481691711 chr13 59656933 59657735 + 1.19693481691711 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 18450 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak2_64_76_-0.528646447059153_6.00246331716532_1.19628090989639-2 chr9 36796565 36797284 + 1.19628090989639 NA intron (NM_001199494, intron 1 of 10) CpG 144 NM_007915 13663 Mm.4337 NM_007915 ENSMUSG00000062762 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA protein-coding common_peak1_92_53_0.496397639616768_6.00308632197185_1.19628090989639 chr3 19425139 19426241 + 1.19628090989639 NA Intergenic Intergenic -82905 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak2_64_76_-0.528646447059153_6.00246331716532_1.19628090989639 chr5 92697796 92699122 + 1.19628090989639 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 15024 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_63_76_-0.550856455623594_5.9913583128831_1.19628090989639 chr8 126665771 126666282 + 1.19628090989639 NA Intergenic Intergenic -72590 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_63_76_-0.550856455623594_5.9913583128831_1.19628090989639 chr10 78412240 78413140 + 1.19628090989639 NA intron (NM_010925, intron 1 of 12) CpG 353 NM_010925 18114 Mm.38344 NM_010925 ENSMUSG00000061032 Rrp1 AL033305|AL033306|AU018604|NNP-1|Nnp1 ribosomal RNA processing 1 homolog (S. cerevisiae) protein-coding common_peak1_142_88_0.391885122294735_6.67167599211377_1.19485856386623 chr8 123224379 123225506 + 1.19485856386623 NA exon (NM_194446, exon 1 of 13) exon (NM_194446, exon 1 of 13) 101 NM_194444 234854 Mm.190984 NM_194444 ENSMUSG00000033862 Cdk10 BC017131 cyclin-dependent kinase 10 protein-coding common_peak1_106_117_-0.430477012332683_6.6674045431955_1.19485856386623 chr3 132870294 132871383 + 1.19485856386623 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 7758 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_71_39_0.562728174212098_5.60329218199341_1.19360251378961-3 chr4 147940890 147941645 + 1.19360251378961 NA exon (NM_029841, exon 1 of 3) exon (NM_029841, exon 1 of 3) 372 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding common_peak2_71_39_0.562728174212098_5.60329218199341_1.19360251378961 chr15 41726920 41727412 + 1.19360251378961 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -61829 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_46_59_-0.633229292306464_5.59027594945529_1.19360251378961-2 chr12 85473144 85473932 + 1.19360251378961 NA promoter-TSS (NM_010234) promoter-TSS (NM_010234) -352 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak2_71_39_0.562728174212098_5.60329218199341_1.19360251378961-2 chr9 105053315 105054025 + 1.19360251378961 NA intron (NM_053159, intron 1 of 9) intron (NM_053159, intron 1 of 9) 402 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak1_71_39_0.562728174212098_5.60329218199341_1.19360251378961-2 chr3 123052720 123053648 + 1.19360251378961 NA Intergenic Intergenic -18197 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak2_46_59_-0.633229292306464_5.59027594945529_1.19360251378961 chr1 58972870 58973738 + 1.19360251378961 NA promoter-TSS (NR_151686) promoter-TSS (NR_151686) 178 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_46_59_-0.633229292306464_5.59027594945529_1.19360251378961 chr2 32757187 32757693 + 1.19360251378961 NA non-coding (NR_045485, exon 1 of 5) non-coding (NR_045485, exon 1 of 5) 206 NM_152800 30933 Mm.200695 NM_152800 ENSMUSG00000009563 Tor2a Prosalusin torsin family 2, member A protein-coding common_peak1_71_39_0.562728174212098_5.60329218199341_1.19360251378961 chr11 49245613 49246369 + 1.19360251378961 NA intron (NM_010794, intron 2 of 2) intron (NM_010794, intron 2 of 2) -1486 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding unique_peak1_71_39_0.562728174212098_5.60329218199341_1.19360251378961 chr8 34806497 34807109 + 1.19360251378961 NA promoter-TSS (NM_176933) promoter-TSS (NM_176933) -807 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372-3 chr16 23167560 23168124 + 1.1935563264372 NA Intergenic Intergenic -7438 NR_155420 105246089 Mm.390905 NR_155420 C730014E05Rik - RIKEN cDNA C730014E05 gene ncRNA common_peak1_53_27_0.665191928842556_5.13995088647888_1.1935563264372-2 chr7 12421822 12422712 + 1.1935563264372 NA intron (NM_001033820, intron 1 of 3) intron (NM_001033820, intron 1 of 3) 224 NM_001033820 619331 Mm.361832 NM_001033820 ENSMUSG00000034071 Zfp551 9630004E07Rik|Znf551 zinc fingr protein 551 protein-coding unique_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372 chr15 37687440 37688347 + 1.1935563264372 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) -7319 NM_001359839 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372-2 chr13 34372681 34373296 + 1.1935563264372 NA Intergenic Intergenic -27806 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_32_44_-0.724787111931916_5.12945954036372_1.1935563264372-3 chr10 81167061 81167696 + 1.1935563264372 NA intron (NM_021501, intron 1 of 10) intron (NM_021501, intron 1 of 10) 342 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_53_27_0.665191928842556_5.13995088647888_1.1935563264372 chr5 65455196 65455645 + 1.1935563264372 NA intron (NM_133697, intron 3 of 4) intron (NM_133697, intron 3 of 4) -19578 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding unique_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372-2 chr16 38712341 38713028 + 1.1935563264372 NA 5' UTR (NM_020260, exon 1 of 12) 5' UTR (NM_020260, exon 1 of 12) 351 NM_020260 12549 Mm.370848 NM_020260 ENSMUSG00000022799 Arhgap31 5830477L08Rik|AU041750|Cdgap|D330026I07Rik Rho GTPase activating protein 31 protein-coding common_peak2_32_44_-0.724787111931916_5.12945954036372_1.1935563264372-6 chr3 79181677 79182319 + 1.1935563264372 NA Intergenic Intergenic -30921 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372-5 chr3 41228571 41229362 + 1.1935563264372 NA Intergenic Intergenic -145920 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_52_27_0.638415133212257_5.12656248866373_1.1935563264372 chr15 39112985 39113262 + 1.1935563264372 NA promoter-TSS (NM_172402) promoter-TSS (NM_172402) 249 NM_198606 223499 Mm.321937 NM_198606 ENSMUSG00000022300 Dcaf13 Gm83|Wdsof1 DDB1 and CUL4 associated factor 13 protein-coding common_peak2_32_44_-0.724787111931916_5.12945954036372_1.1935563264372-4 chr18 73814809 73815466 + 1.1935563264372 NA intron (NM_145494, intron 1 of 15) CpG 255 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372-6 chr9 110531625 110532378 + 1.1935563264372 NA promoter-TSS (NM_001081340) promoter-TSS (NM_001081340) -596 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding unique_peak1_53_27_0.665191928842556_5.13995088647888_1.1935563264372 chr14 20161713 20162629 + 1.1935563264372 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 19611 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_53_27_0.665191928842556_5.13995088647888_1.1935563264372 chr4 128961697 128962351 + 1.1935563264372 NA intron (NM_172875, intron 2 of 10) CpG 431 NM_172875 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding common_peak2_32_44_-0.724787111931916_5.12945954036372_1.1935563264372 chr10 22148508 22148985 + 1.1935563264372 NA exon (NM_001254744, exon 1 of 2) exon (NM_001254744, exon 1 of 2) 524 NM_001254744 319887 Mm.177746 NM_001254744 ENSMUSG00000097327 E030030I06Rik - RIKEN cDNA E030030I06 gene protein-coding common_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372 chr11 29246285 29247007 + 1.1935563264372 NA intron (NM_025740, intron 1 of 9) intron (NM_025740, intron 1 of 9) 626 NM_025740 216618 Mm.128663 NM_025740 ENSMUSG00000020462 Cfap36 2300003H10|4931428D14Rik|Ccdc104 cilia and flagella associated protein 36 protein-coding common_peak2_53_27_0.665191928842556_5.13995088647888_1.1935563264372-2 chr9 71805367 71805735 + 1.1935563264372 NA Intergenic Intergenic -33949 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak1_32_44_-0.724787111931916_5.12945954036372_1.1935563264372 chr16 45849513 45850100 + 1.1935563264372 NA Intergenic ID|SINE|ID -5055 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_32_44_-0.724787111931916_5.12945954036372_1.1935563264372-2 chr10 23786734 23787112 + 1.1935563264372 NA intron (NM_011295, intron 2 of 5) intron (NM_011295, intron 2 of 5) 286 NM_011295 20042 Mm.371846 NM_011295 ENSMUSG00000061983 Rps12 - ribosomal protein S12 protein-coding common_peak2_32_44_-0.724787111931916_5.12945954036372_1.1935563264372-5 chr2 84529351 84529889 + 1.1935563264372 NA Intergenic Intergenic -22747 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_52_27_0.638415133212257_5.12656248866373_1.1935563264372-4 chr2 180216004 180217054 + 1.1935563264372 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 9330 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak1_53_27_0.665191928842556_5.13995088647888_1.1935563264372-3 chr7 112454125 112455013 + 1.1935563264372 NA intron (NM_020606, intron 1 of 12) MLTR11A|LTR|ERVK 26863 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak2_115_125_-0.409421881695895_6.77256898265197_1.19213338930207 chr3 145885408 145887103 + 1.19213338930207 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -38007 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_77_89_-0.492534299220351_6.2455859467195_1.19205934352649 chr11 69088270 69089109 + 1.19205934352649 NA intron (NM_009497, intron 1 of 4) CpG 161 NM_009497 22318 Mm.28643 NM_009497 ENSMUSG00000020894 Vamp2 Syb-2|Syb2|Vamp-2|sybII vesicle-associated membrane protein 2 protein-coding common_peak1_77_89_-0.492534299220351_6.2455859467195_1.19205934352649 chr2 68861603 68863157 + 1.19205934352649 NA intron (NM_001347161, intron 1 of 10) intron (NM_001347161, intron 1 of 10) 939 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_99_110_-0.439171983771042_6.57482987446459_1.1908845149364 chr16 13902575 13903898 + 1.1908845149364 NA promoter-TSS (NM_053181) promoter-TSS (NM_053181) 75 NM_001289562 93734 Mm.76554 NM_033564 ENSMUSG00000022679 Mpv17l M-LP Mpv17 transgene, kidney disease mutant-like protein-coding common_peak1_263_259_-0.276466767350427_7.88413442935324_1.18922176577395 chr2 116974842 116977484 + 1.18922176577395 NA Intergenic Intergenic 76011 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_84_96_-0.477480065670042_6.36117280935211_1.18896783403223-2 chr9 103032647 103033617 + 1.18896783403223 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 24643 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_117_70_0.442598986244753_6.37104661262706_1.18896783403223-3 chr6 90369646 90370704 + 1.18896783403223 NA exon (NM_030260, exon 1 of 6) exon (NM_030260, exon 1 of 6) 681 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_117_70_0.442598986244753_6.37104661262706_1.18896783403223 chr11 76762538 76763558 + 1.18896783403223 NA intron (NM_001356321, intron 1 of 8) intron (NM_001356321, intron 1 of 8) 530 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak2_85_96_-0.460725291550939_6.36955019641166_1.18896783403223 chr12 55080226 55081461 + 1.18896783403223 NA promoter-TSS (NM_028314) promoter-TSS (NM_028314) 347 NM_011899 24067 Mm.471968 NM_011899 ENSMUSG00000073079 Srp54a 54kDa|Srp54 signal recognition particle 54A protein-coding common_peak1_85_96_-0.460725291550939_6.36955019641166_1.18896783403223 chr8 25067241 25067972 + 1.18896783403223 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -28644 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak2_84_96_-0.477480065670042_6.36117280935211_1.18896783403223 chr19 44907930 44908864 + 1.18896783403223 NA Intergenic Intergenic -22722 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak1_117_70_0.442598986244753_6.37104661262706_1.18896783403223-2 chr14 20733580 20734693 + 1.18896783403223 NA TTS (NM_001039138) TTS (NM_001039138) 426 NM_010811 17423 Mm.4084 NM_010811 ENSMUSG00000039308 Ndst2 Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding common_peak1_116_70_0.430407279832096_6.36495075942073_1.18896783403223 chr3 31017243 31018607 + 1.18896783403223 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) -21041 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak2_117_70_0.442598986244753_6.37104661262706_1.18896783403223 chr7 113207574 113208548 + 1.18896783403223 NA intron (NM_001357070, intron 1 of 19) CpG 596 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak1_183_117_0.346100293287924_7.0556931960058_1.18896673625842 chr10 80755150 80756519 + 1.18896673625842 NA intron (NM_199322, intron 1 of 27) intron (NM_199322, intron 1 of 27) 631 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_142_150_-0.370786186063945_7.05301164629311_1.18896673625842 chr4 46138045 46139642 + 1.18896673625842 NA promoter-TSS (NM_173033) promoter-TSS (NM_173033) -134 NM_001355376 272027 Mm.249594 NM_173033 ENSMUSG00000035495 Tstd2 3010020C06 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 protein-coding common_peak2_92_103_-0.449154576360855_6.47586242996066_1.18877383208865 chr4 130050719 130051838 + 1.18877383208865 NA intron (NM_028266, intron 2 of 69) intron (NM_028266, intron 2 of 69) 3438 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak2_125_76_0.41952877797869_6.47655092968425_1.18877383208862 chr2 164745489 164746881 + 1.18877383208862 NA intron (NM_133763, intron 1 of 12) GC_rich|Low_complexity|Low_complexity 170 NM_133763 76233 Mm.440009 NM_133763 ENSMUSG00000017299 Dnttip1 6430706C13Rik deoxynucleotidyltransferase, terminal, interacting protein 1 protein-coding common_peak1_125_76_0.41952877797869_6.47655092968425_1.18877383208862-2 chr19 6298019 6298788 + 1.18877383208862 NA exon (NM_010119, exon 5 of 5) exon (NM_010119, exon 5 of 5) -8054 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak2_125_76_0.41952877797869_6.47655092968425_1.18877383208862-2 chr7 44891675 44892736 + 1.18877383208862 NA 5' UTR (NM_001331208, exon 1 of 16) 5' UTR (NM_001331208, exon 1 of 16) 219 NM_001331208 75613 Mm.157778 NM_029365 ENSMUSG00000002968 Med25 2610034E13Rik|2610529E18Rik|ESTM2 mediator complex subunit 25 protein-coding common_peak1_125_76_0.41952877797869_6.47655092968425_1.18877383208862 chr15 64313044 64314543 + 1.18877383208862 NA intron (NM_001276461, intron 2 of 28) intron (NM_001276461, intron 2 of 28) -1120 NM_001276463 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_42_54_-0.635117183315228_5.46380112186705_1.18863360106103-2 chr5 136051276 136051593 + 1.18863360106103 NA Intergenic Intergenic -5833 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak1_42_54_-0.635117183315228_5.46380112186705_1.18863360106103 chr18 60891779 60892151 + 1.18863360106103 NA Intergenic MIR3|SINE|MIR -20275 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_41_54_-0.66882501750528_5.44694720477202_1.18863360106103 chr6 142277871 142278983 + 1.18863360106103 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) 447 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak2_42_54_-0.635117183315228_5.46380112186705_1.18863360106103-2 chr7 28049380 28049995 + 1.18863360106103 NA intron (NM_011874, intron 1 of 10) intron (NM_011874, intron 1 of 10) 405 NM_011874 23996 Mm.29582 NM_011874 ENSMUSG00000030603 Psmc4 CIP21|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding common_peak2_42_54_-0.635117183315228_5.46380112186705_1.18863360106103 chr1 24678623 24679124 + 1.18863360106103 NA promoter-TSS (NM_001310483) promoter-TSS (NM_001310483) -45 NM_001310483 68421 Mm.336563 NM_026719 ENSMUSG00000073725 Lmbrd1 0910001K20Rik|AV347960 LMBR1 domain containing 1 protein-coding common_peak1_65_35_0.590086003382202_5.46496800313341_1.18863360106102 chr6 34709424 34710263 + 1.18863360106102 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 399 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_65_35_0.590086003382202_5.46496800313341_1.18863360106102 chr2 120128995 120129472 + 1.18863360106102 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 25342 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_65_35_0.590086003382202_5.46496800313341_1.18863360106102-2 chr8 91313610 91314179 + 1.18863360106102 NA promoter-TSS (NM_173431) promoter-TSS (NM_173431) 369 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak1_65_35_0.590086003382202_5.46496800313341_1.18863360106102-2 chr5 92841883 92842716 + 1.18863360106102 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 32917 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_65_35_0.590086003382202_5.46496800313341_1.18863360106102-3 chr3 103988643 103989151 + 1.18863360106102 NA intron (NM_013629, intron 8 of 18) intron (NM_013629, intron 8 of 18) -20581 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA unique_peak1_65_35_0.590086003382202_5.46496800313341_1.18863360106102 chr11 96821878 96822702 + 1.18863360106102 NA exon (NM_001130450, exon 3 of 5) exon (NM_001130450, exon 3 of 5) 1641 NM_001361682 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak2_65_35_0.590086003382202_5.46496800313341_1.18863360106102-2 chr3 98043650 98043966 + 1.18863360106102 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 30270 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_59_31_0.623477565625885_5.31173878281294_1.18805111968663 chr4 125121847 125122514 + 1.18805111968663 NA intron (NM_153159, intron 3 of 5) intron (NM_153159, intron 3 of 5) 5701 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak2_36_49_-0.712895448717282_5.28740846541608_1.18805111968663 chr2 163352706 163353804 + 1.18805111968663 NA intron (NM_021566, intron 2 of 5) MIR|SINE|MIR 44718 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_37_49_-0.674692735229577_5.30650982215994_1.18805111968663-2 chr16 36874479 36874888 + 1.18805111968663 NA 5' UTR (NM_134111, exon 1 of 6) 5' UTR (NM_134111, exon 1 of 6) 143 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak2_37_49_-0.674692735229577_5.30650982215994_1.18805111968663 chr16 21423208 21423677 + 1.18805111968663 NA intron (NM_001285894, intron 1 of 45) CpG 324 NM_001285894 209018 Mm.235683 NM_145948 ENSMUSG00000033653 Vps8 AI315068|AU040738|mKIAA0804 VPS8 CORVET complex subunit protein-coding common_peak1_37_49_-0.674692735229577_5.30650982215994_1.18805111968663 chr5 143638753 143639298 + 1.18805111968663 NA intron (NM_011182, intron 1 of 12) intron (NM_011182, intron 1 of 12) -12216 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak2_59_31_0.623477565625885_5.31173878281294_1.18805111968663 chr6 125009228 125009598 + 1.18805111968663 NA promoter-TSS (NM_001347452) promoter-TSS (NM_001347452) 175 NM_001252083 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding common_peak2_37_49_-0.674692735229577_5.30650982215994_1.18805111968663-3 chr8 47933547 47934257 + 1.18805111968663 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 56649 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_332_319_-0.2434061085215_8.20022504062661_1.18723303031333 chr15 77969725 77971838 + 1.18723303031333 NA promoter-TSS (NM_018749) promoter-TSS (NM_018749) 43 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding common_peak2_162_168_-0.34573644655776_7.2280112130033_1.18677109534288 chr11 120233552 120235210 + 1.18677109534288 NA intron (NM_198423, intron 1 of 27) CpG 1434 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_162_168_-0.34573644655776_7.2280112130033_1.18677109534288 chr8 41239730 41241074 + 1.18677109534288 NA intron (NM_023662, intron 1 of 37) intron (NM_023662, intron 1 of 37) 643 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501 chr1 86109162 86109522 + 1.18646456559501 NA intron (NM_008311, intron 2 of 3) intron (NM_008311, intron 2 of 3) 2628 NM_008311 15559 Mm.439747 NM_008311 ENSMUSG00000026228 Htr2b 5-HT2B|AJ012488|AV377389 5-hydroxytryptamine (serotonin) receptor 2B protein-coding common_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501 chr2 30693417 30693738 + 1.18646456559501 NA Intergenic CpG -15566 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak2_28_12_0.881528282809418_4.1412038595458_1.18646456559501 chr11 70017952 70018304 + 1.18646456559501 NA promoter-TSS (NM_001109752) promoter-TSS (NM_001109752) -477 NM_001109752 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-11 chr3 25145157 25145492 + 1.18646456559501 NA Intergenic Intergenic -361318 NM_001326288 635702 Mm.448351 NM_001326288 ENSMUSG00000102758 Naaladl2 2810043G22Rik|EG635702|Gm1021 N-acetylated alpha-linked acidic dipeptidase-like 2 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-20 chr8 11328466 11328700 + 1.18646456559501 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -15757 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-11 chr18 23497509 23498189 + 1.18646456559501 NA intron (NM_001361215, intron 1 of 19) intron (NM_001361215, intron 1 of 19) 367 NM_001285810 13527 Mm.94371 NM_010087 ENSMUSG00000024302 Dtna 2210407P21Rik|DTN-A|Dtn|Gm19389|a-DB-1|adbn dystrobrevin alpha protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-8 chr17 44718391 44718693 + 1.18646456559501 NA intron (NR_073425, intron 2 of 5) intron (NR_073425, intron 2 of 5) 17634 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-7 chr16 92952962 92953509 + 1.18646456559501 NA Intergenic Intergenic -127161 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-19 chr7 132813163 132813580 + 1.18646456559501 NA promoter-TSS (NM_212473) promoter-TSS (NM_212473) -175 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-5 chr4 59197041 59197356 + 1.18646456559501 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 7648 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-2 chr10 79801875 79802289 + 1.18646456559501 NA intron (NM_023128, intron 1 of 8) intron (NM_023128, intron 1 of 8) 8510 NM_001161747 18483 Mm.34650 NM_023128 ENSMUSG00000035863 Palm - paralemmin protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-8 chr18 24755964 24756293 + 1.18646456559501 NA intron (NM_001289654, intron 2 of 24) intron (NM_001289654, intron 2 of 24) 47505 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-4 chr11 49055152 49055520 + 1.18646456559501 NA Intergenic Intergenic -4094 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-7 chr3 89246666 89246917 + 1.18646456559501 NA promoter-TSS (NM_183037) promoter-TSS (NM_183037) 318 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak2_28_12_0.881528282809418_4.1412038595458_1.18646456559501-2 chr12 70891491 70891775 + 1.18646456559501 NA intron (NM_028127, intron 10 of 13) intron (NM_028127, intron 10 of 13) -46224 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501 chr11 16828895 16829534 + 1.18646456559501 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 77011 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-2 chr1 183905768 183906343 + 1.18646456559501 NA Intergenic Intergenic 127943 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-10 chr17 75252594 75253241 + 1.18646456559501 NA intron (NM_019919, intron 9 of 33) intron (NM_019919, intron 9 of 33) 74136 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-18 chr7 110795916 110796469 + 1.18646456559501 NA intron (NM_009667, intron 6 of 14) intron (NM_009667, intron 6 of 14) 23588 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-13 chr7 55854140 55854630 + 1.18646456559501 NA intron (NM_001164661, intron 2 of 31) intron (NM_001164661, intron 2 of 31) 12314 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-8 chr3 101377215 101377500 + 1.18646456559501 NA intron (NM_207205, intron 1 of 10) CpG 232 NM_207205 78908 Mm.257997 NM_207205 ENSMUSG00000042035 Igsf3 1700016K10Rik|2810035F16Rik|4833439O17Rik|mKIAA0466 immunoglobulin superfamily, member 3 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-13 chr3 81916043 81916467 + 1.18646456559501 NA Intergenic Intergenic -16346 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-5 chr12 69682201 69682489 + 1.18646456559501 NA promoter-TSS (NM_001135559) promoter-TSS (NM_001135559) -493 NM_001135559 20663 Mm.3770 NM_001135559 ENSMUSG00000034801 Sos2 SOS-2|mSOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-2 chr10 86219961 86220296 + 1.18646456559501 NA intron (NM_013722, intron 6 of 13) B2_Mm2|SINE|B2 -80284 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-4 chr8 23683115 23683412 + 1.18646456559501 NA intron (NM_177086, intron 1 of 6) intron (NM_177086, intron 1 of 6) 13602 NM_177086 320158 Mm.121274 NM_177086 ENSMUSG00000037492 Zmat4 9630048M01Rik zinc finger, matrin type 4 protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-7 chr8 94052009 94052267 + 1.18646456559501 NA exon (NM_177767, exon 4 of 13) exon (NM_177767, exon 4 of 13) 14940 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-6 chr2 91948071 91948488 + 1.18646456559501 NA intron (NM_001166597, intron 1 of 31) intron (NM_001166597, intron 1 of 31) 2069 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-3 chr11 22001845 22002357 + 1.18646456559501 NA promoter-TSS (NM_011023) promoter-TSS (NM_011023) -450 NM_011023 18423 Mm.129663 NM_011023 ENSMUSG00000005917 Otx1 A730044F23Rik|jv orthodenticle homeobox 1 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501 chr1 172311146 172311432 + 1.18646456559501 NA Intergenic Intergenic -1078 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-10 chr2 133460457 133461121 + 1.18646456559501 NA Intergenic Intergenic -91370 NM_007553 12156 Mm.103205 NM_007553 ENSMUSG00000027358 Bmp2 AI467020|Bmp2a bone morphogenetic protein 2 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-12 chr7 25788850 25789085 + 1.18646456559501 NA promoter-TSS (NM_001190974) promoter-TSS (NM_001190974) -234 NM_001190975 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-3 chr15 86054254 86054745 + 1.18646456559501 NA Intergenic Intergenic -3196 NM_172611 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-4 chr2 6872121 6872528 + 1.18646456559501 NA promoter-TSS (NM_001347094) promoter-TSS (NM_001347094) -289 NM_001347094 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-15 chr9 102656549 102656990 + 1.18646456559501 NA Intergenic Intergenic 30473 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-24 chr8 111715156 111715795 + 1.18646456559501 NA intron (NM_001198839, intron 3 of 6) intron (NM_001198839, intron 3 of 6) 16661 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-17 chr7 106550316 106550854 + 1.18646456559501 NA Intergenic Intergenic 94060 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501 chr10 95769553 95769782 + 1.18646456559501 NA Intergenic Intergenic -170996 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-7 chr16 15862873 15863318 + 1.18646456559501 NA 5' UTR (NM_029354, exon 1 of 3) 5' UTR (NM_029354, exon 1 of 3) 274 NM_029354 72083 Mm.22351 NM_029354 ENSMUSG00000022671 Mzt2 2410018G20Rik|2610001E06Rik|Fam128|Fam128b mitotic spindle organizing protein 2 protein-coding common_peak1_14_24_-1.00626866500235_4.14072185727355_1.18646456559501 chr17 24528394 24528676 + 1.18646456559501 NA promoter-TSS (NM_001172114) promoter-TSS (NM_001172114) 284 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-16 chr7 25707262 25707585 + 1.18646456559501 NA Intergenic Intergenic 11630 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-5 chr11 100850743 100851216 + 1.18646456559501 NA promoter-TSS (NM_001113563) promoter-TSS (NM_001113563) -394 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-21 chr8 11950151 11950406 + 1.18646456559501 NA Intergenic Intergenic 109757 NM_029326 75528 Mm.440342 NM_029326 ENSMUSG00000031512 Tex29 1700018L24Rik testis expressed 29 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-4 chr17 28930460 28930857 + 1.18646456559501 NA Intergenic Intergenic 11604 NM_153390 69307 Mm.107605 NM_153390 ENSMUSG00000045378 Pxt1 1700001G18Rik|Stepp peroxisomal, testis specific 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-15 chr6 72315721 72316083 + 1.18646456559501 NA Intergenic B1_Mus1|SINE|Alu 11292 NM_147779 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding common_peak1_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-2 chr19 53395598 53395803 + 1.18646456559501 NA Intergenic Intergenic -5066 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-14 chr8 117177737 117178001 + 1.18646456559501 NA intron (NM_001081151, intron 1 of 10) intron (NM_001081151, intron 1 of 10) 19734 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-4 chr12 31057184 31057606 + 1.18646456559501 NA Intergenic Intergenic -16573 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-14 chr4 150051588 150052372 + 1.18646456559501 NA Intergenic Intergenic -16474 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-22 chr8 24351776 24352337 + 1.18646456559501 NA Intergenic Intergenic 86890 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-3 chr8 120016251 120016496 + 1.18646456559501 NA intron (NM_001310635, intron 5 of 14) intron (NM_001310635, intron 5 of 14) 23935 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak2_28_12_0.881528282809418_4.1412038595458_1.18646456559501-3 chr4 133599369 133599632 + 1.18646456559501 NA Intergenic MIR3|SINE|MIR 2668 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-2 chr11 5485631 5486027 + 1.18646456559501 NA Intergenic Intergenic -34812 NM_013842 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-6 chr7 16326114 16326591 + 1.18646456559501 NA TTS (NM_019748) TTS (NM_019748) 16769 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-5 chr18 68127948 68128296 + 1.18646456559501 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -99824 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_14_24_-1.00626866500235_4.14072185727355_1.18646456559501 chr13 80885757 80885954 + 1.18646456559501 NA promoter-TSS (NR_153411) promoter-TSS (NR_153411) -240 NR_153411 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-9 chr19 21819444 21819842 + 1.18646456559501 NA intron (NM_001033759, intron 12 of 23) intron (NM_001033759, intron 12 of 23) 41303 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-3 chr7 51268367 51268734 + 1.18646456559501 NA Intergenic Intergenic -242479 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-3 chr10 76316727 76316991 + 1.18646456559501 NA intron (NM_001081419, intron 5 of 37) intron (NM_001081419, intron 5 of 37) 28432 NM_001081419 64451 Mm.33183 NM_001081419 ENSMUSG00000020231 Dip2a 4931420H10Rik|AI426328|Dip2|Kiaa0184-hp|mKIAA0184 disco interacting protein 2 homolog A protein-coding common_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-2 chr9 21181672 21181901 + 1.18646456559501 NA intron (NM_183408, intron 1 of 14) CpG -2315 NM_001310750 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-3 chr19 40405323 40405570 + 1.18646456559501 NA intron (NM_001034962, intron 1 of 22) intron (NM_001034962, intron 1 of 22) -3136 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-12 chr19 5295717 5295981 + 1.18646456559501 NA promoter-TSS (NM_030109) promoter-TSS (NM_030109) -394 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding common_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-9 chr4 62704652 62705010 + 1.18646456559501 NA Intergenic Intergenic 30857 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-9 chr17 45684928 45685338 + 1.18646456559501 NA intron (NM_198167, intron 1 of 23) intron (NM_198167, intron 1 of 23) 1085 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-23 chr8 111521732 111522092 + 1.18646456559501 NA intron (NM_001170742, intron 1 of 25) intron (NM_001170742, intron 1 of 25) 195 NM_001170742 319481 Mm.247294 NM_176923 ENSMUSG00000031959 Wdr59 5430401O09Rik|Cdw12 WD repeat domain 59 protein-coding unique_peak2_13_24_-1.10510211640955_4.09130513156995_1.18646456559501-6 chr13 3774518 3775019 + 1.18646456559501 NA Intergenic Intergenic 29550 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501 chr1 6363267 6363787 + 1.18646456559501 NA intron (NM_001195732, intron 1 of 4) intron (NM_001195732, intron 1 of 4) 4196 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding unique_peak1_28_12_0.881528282809418_4.1412038595458_1.18646456559501-6 chr11 118001081 118001453 + 1.18646456559501 NA intron (NR_151726, intron 3 of 9) intron (NR_151726, intron 3 of 9) -1003 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_14_24_-1.00626866500235_4.14072185727355_1.18646456559501-2 chr6 145795957 145796376 + 1.18646456559501 NA Intergenic PB1D9|SINE|Alu -12217 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak2_144_89_0.395661844228227_6.68968401844379_1.1861650420462 chr1 43934048 43935087 + 1.1861650420462 NA intron (NM_009418, intron 1 of 29) intron (NM_009418, intron 1 of 29) 573 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak1_143_89_0.385748193196542_6.68472719292795_1.1861650420462 chr4 134923558 134924965 + 1.1861650420462 NA exon (NM_023665, exon 2 of 5) exon (NM_023665, exon 2 of 5) 636 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding common_peak2_144_89_0.395661844228227_6.68968401844379_1.1861650420462-2 chr3 96262015 96263283 + 1.1861650420462 NA TTS (NM_033596) TTS (NM_033596) 668 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak2_71_83_-0.5076611536793_6.13848684593911_1.18609483165595-2 chr7 25658349 25659035 + 1.18609483165595 NA promoter-TSS (NM_138586) promoter-TSS (NM_138586) 69 NM_007533 12039 Mm.25848 NM_007533 ENSMUSG00000060376 Bckdha - branched chain ketoacid dehydrogenase E1, alpha polypeptide protein-coding common_peak1_71_83_-0.5076611536793_6.13848684593911_1.18609483165595 chr8 27023922 27024825 + 1.18609483165595 NA intron (NM_153592, intron 1 of 11) intron (NM_153592, intron 1 of 11) 574 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding common_peak2_71_83_-0.5076611536793_6.13848684593911_1.18609483165595 chr11 69259112 69260129 + 1.18609483165595 NA Intergenic Intergenic -22598 NM_008192 14919 Mm.291816 NM_008192 ENSMUSG00000020890 Gucy2e GC-E|GC1|ROS-GC1 guanylate cyclase 2e protein-coding common_peak1_100_59_0.462607303648895_6.13819424743297_1.18609483165594-2 chr10 27985442 27986231 + 1.18609483165594 NA Intergenic Intergenic -88984 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak1_100_59_0.462607303648895_6.13819424743297_1.18609483165594 chr10 22731547 22732124 + 1.18609483165594 NA promoter-TSS (NM_011603) promoter-TSS (NM_011603) -388 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak1_53_65_-0.571847268458294_5.75847048512931_1.18509719468782 chr12 79540998 79541581 + 1.18509719468782 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 243938 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_78_44_0.525714569945602_5.75471038130248_1.18509719468782 chr9 99139461 99140022 + 1.18509719468782 NA intron (NM_029094, intron 1 of 23) CpG 470 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_52_65_-0.598624064088593_5.74508208731416_1.18509719468782 chr15 96708459 96709670 + 1.18509719468782 NA Intergenic Intergenic -9336 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_52_65_-0.598624064088593_5.74508208731416_1.18509719468782-2 chr6 83506097 83506901 + 1.18509719468782 NA intron (NR_149734, intron 1 of 6) intron (NR_149734, intron 1 of 6) 470 NM_013764 27369 Mm.42234 NM_013764 ENSMUSG00000014554 Dguok dGK|dGK1|dGK2|dGK3 deoxyguanosine kinase protein-coding unique_peak1_78_44_0.525714569945602_5.75471038130248_1.18509719468782 chr15 99394269 99395560 + 1.18509719468782 NA intron (NM_001171036, intron 2 of 10) intron (NM_001171036, intron 2 of 10) 1695 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak2_53_65_-0.571847268458294_5.75847048512931_1.18509719468782-2 chr13 59943367 59944058 + 1.18509719468782 NA Intergenic Intergenic -85999 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_78_44_0.525714569945602_5.75471038130248_1.18509719468782-2 chr11 69991664 69992621 + 1.18509719468782 NA intron (NM_019749, intron 1 of 3) intron (NM_019749, intron 1 of 3) 772 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding common_peak2_53_65_-0.571847268458294_5.75847048512931_1.18509719468782 chr11 96284142 96284803 + 1.18509719468782 NA 3' UTR (NM_010461, exon 2 of 2) 3' UTR (NM_010461, exon 2 of 2) -2174 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak1_52_65_-0.598624064088593_5.74508208731416_1.18509719468782 chr4 65604416 65605629 + 1.18509719468782 NA promoter-TSS (NM_001161782) promoter-TSS (NM_001161782) 36 NM_001161782 69807 Mm.22786 NM_053084 ENSMUSG00000051675 Trim32 1810045E12Rik|3f3|BBS11|Zfp117 tripartite motif-containing 32 protein-coding common_peak1_78_44_0.525714569945602_5.75471038130248_1.18509719468782 chr1 119503935 119504665 + 1.18509719468782 NA intron (NM_022327, intron 1 of 4) intron (NM_022327, intron 1 of 4) 482 NM_022327 64143 Mm.27832 NM_022327 ENSMUSG00000004451 Ralb 5730472O18Rik v-ral simian leukemia viral oncogene B protein-coding common_peak1_93_54_0.48524661020415_6.02398301862674_1.18246856546184-2 chr10 89532494 89533551 + 1.18246856546184 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 600 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding common_peak2_93_54_0.48524661020415_6.02398301862674_1.18246856546184 chr17 5492730 5493660 + 1.18246856546184 NA 5' UTR (NM_146073, exon 1 of 9) 5' UTR (NM_146073, exon 1 of 9) 595 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak1_93_54_0.48524661020415_6.02398301862674_1.18246856546184 chr1 62713317 62714096 + 1.18246856546184 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 10389 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_144_151_-0.360412572885683_7.06772122700074_1.18233141201862 chr18 35872837 35874851 + 1.18233141201862 NA Intergenic CpG 19157 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_59_71_-0.546447435816427_5.8967012835341_1.18183063007831 chr9 95954776 95955386 + 1.18183063007831 NA intron (NM_001311130, intron 1 of 41) CpG 321 NM_011916 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak1_135_83_0.403403475411203_6.59401916048436_1.1816458605456 chr12 87265801 87267265 + 1.1816458605456 NA promoter-TSS (NM_001142580) promoter-TSS (NM_001142580) -195 NM_146036 217737 Mm.22626 NM_146036 ENSMUSG00000021037 Ahsa1 BC023857|p38 AHA1, activator of heat shock protein ATPase 1 protein-coding common_peak2_135_83_0.403403475411203_6.59401916048436_1.1816458605456 chr13 24800900 24801960 + 1.1816458605456 NA promoter-TSS (NM_024473) promoter-TSS (NM_024473) -227 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding common_peak2_135_83_0.403403475411203_6.59401916048436_1.1816458605456-2 chr6 121066159 121067925 + 1.1816458605456 NA intron (NR_138098, intron 1 of 1) intron (NR_138098, intron 1 of 1) 2578 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA common_peak1_100_111_-0.43785702280019_6.58842641065751_1.18164586054558 chr2 122028658 122029665 + 1.18164586054558 NA intron (NM_001256055, intron 2 of 7) CpG-8471 578 NM_001256055 100042807 Mm.329403 NM_001256055 ENSMUSG00000043424 Eif3j2 Eif3j-2|Gm9781|eIF3 p35|eIF3j-B eukaryotic translation initiation factor 3, subunit J2 protein-coding common_peak2_101_111_-0.423743442066942_6.59548320102413_1.18164586054558 chr7 98655914 98656625 + 1.18164586054558 NA intron (NM_172280, intron 1 of 19) CpG 300 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak1_163_169_-0.345486348110508_7.23664776208245_1.18089830624691 chr16 94569705 94571168 + 1.18089830624691 NA promoter-TSS (NM_001113389) promoter-TSS (NM_001113389) 230 NM_007890 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak1_109_65_0.447383202419241_6.26808572056807_1.18046013851069 chr7 84521783 84523064 + 1.18046013851069 NA Intergenic Intergenic -6531 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_78_90_-0.49022697392342_6.26268115323699_1.18046013851069 chr1 90224871 90226065 + 1.18046013851069 NA Intergenic Intergenic 21488 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding common_peak1_28_40_-0.775584003667573_4.9697600027843_1.17890083738706 chr10 86161186 86161578 + 1.17890083738706 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 65528 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_28_40_-0.775584003667573_4.9697600027843_1.17890083738706-2 chr8 94707034 94707603 + 1.17890083738706 NA Intergenic Intergenic -11076 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak2_28_40_-0.775584003667573_4.9697600027843_1.17890083738706 chr10 17633247 17633792 + 1.17890083738706 NA Intergenic Intergenic -89709 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_28_40_-0.775584003667573_4.9697600027843_1.17890083738706-3 chr16 4003227 4003665 + 1.17890083738706 NA Intergenic Intergenic -1768 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak2_28_40_-0.775584003667573_4.9697600027843_1.17890083738706-2 chr12 84884633 84885004 + 1.17890083738706 NA Intergenic Intergenic -8323 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak2_28_40_-0.775584003667573_4.9697600027843_1.17890083738706-4 chr5 112271512 112271974 + 1.17890083738706 NA Intergenic Intergenic -4948 NM_001326590 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_28_40_-0.775584003667573_4.9697600027843_1.17890083738706-5 chr8 110939184 110939754 + 1.17890083738706 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 19604 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding unique_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-3 chr3 89213970 89214634 + 1.17890083738705 NA promoter-TSS (NM_013691) promoter-TSS (NM_013691) 33 NM_013604 17827 Mm.280943 NM_013604 ENSMUSG00000064068 Mtx1 Gcap6|Mtx metaxin 1 protein-coding common_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-4 chr18 52558085 52558820 + 1.17890083738705 NA Intergenic B1_Mus1|SINE|Alu -28585 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-2 chr13 34697618 34698185 + 1.17890083738705 NA Intergenic Intergenic -41741 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_47_24_0.659964477097281_4.97383842832336_1.17890083738705 chr10 96767826 96768342 + 1.17890083738705 NA Intergenic Intergenic 151083 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_48_24_0.68950195359133_4.98860716657039_1.17890083738705 chr10 110920333 110920969 + 1.17890083738705 NA intron (NM_007792, intron 1 of 5) intron (NM_007792, intron 1 of 5) 475 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding common_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705 chr1 62768031 62768583 + 1.17890083738705 NA intron (NM_001077404, intron 10 of 16) intron (NM_001077404, intron 10 of 16) 26425 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak2_47_24_0.659964477097281_4.97383842832336_1.17890083738705-2 chr12 112795053 112795534 + 1.17890083738705 NA Intergenic Intergenic -13682 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding unique_peak1_48_24_0.68950195359133_4.98860716657039_1.17890083738705 chr5 115300388 115300894 + 1.17890083738705 NA promoter-TSS (NR_131932) promoter-TSS (NR_131932) 349 NM_019682 56455 Mm.256858 NM_019682 ENSMUSG00000009013 Dynll1 Dlc8|Dnclc1|Pin dynein light chain LC8-type 1 protein-coding common_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-3 chr13 53584412 53585076 + 1.17890083738705 NA Intergenic Intergenic 54457 NR_131079 77398 Mm.174307 NR_131079 ENSMUSG00000113599 9530014B07Rik - RIKEN cDNA 9530014B07 gene ncRNA unique_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-2 chr2 29712270 29712824 + 1.17890083738705 NA intron (NM_001039086, intron 11 of 25) intron (NM_001039086, intron 11 of 25) -48981 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding unique_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705 chr2 27734926 27735610 + 1.17890083738705 NA intron (NM_001290482, intron 1 of 9) intron (NM_001290482, intron 1 of 9) 24685 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_48_24_0.68950195359133_4.98860716657039_1.17890083738705-2 chr6 34637750 34638295 + 1.17890083738705 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 39518 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_48_24_0.68950195359133_4.98860716657039_1.17890083738705-2 chr7 24395250 24396290 + 1.17890083738705 NA Intergenic Intergenic -3858 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_48_24_0.68950195359133_4.98860716657039_1.17890083738705-3 chr8 126798146 126798538 + 1.17890083738705 NA Intergenic Intergenic -50678 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-5 chr4 59756941 59757483 + 1.17890083738705 NA Intergenic Intergenic 26643 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding unique_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-4 chr6 55203405 55204086 + 1.17890083738705 NA intron (NM_001142781, intron 1 of 17) intron (NM_001142781, intron 1 of 17) 362 NM_001142781 330323 Mm.268997 NM_177883 ENSMUSG00000038022 Mindy4 C330043M08Rik|Fam188b|Gm1406 MINDY lysine 48 deubiquitinase 4 protein-coding common_peak1_47_24_0.659964477097281_4.97383842832336_1.17890083738705-6 chr6 82042530 82043065 + 1.17890083738705 NA intron (NM_145570, intron 1 of 2) intron (NM_145570, intron 1 of 2) 1169 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak2_48_24_0.68950195359133_4.98860716657039_1.17890083738705 chr13 60602226 60602638 + 1.17890083738705 NA 5' UTR (NM_001285917, exon 2 of 27) 5' UTR (NM_001285917, exon 2 of 27) 221 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding common_peak1_174_111_0.349548010095591_6.9821289271054_1.17878887567373 chr4 32249973 32252105 + 1.17878887567373 NA Intergenic Intergenic -166396 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_86_97_-0.458961220510488_6.38522923385996_1.17831092014798 chr15 59776731 59778125 + 1.17831092014798 NA Intergenic Intergenic 17531 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_86_97_-0.458961220510488_6.38522923385996_1.17831092014798-2 chr19 56600723 56601782 + 1.17831092014798 NA Intergenic Intergenic 52991 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak2_322_218_0.260057248916141_7.90481568405924_1.17808790567017 chr3 98381938 98384201 + 1.17808790567017 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 588 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_145_90_0.389565815793986_6.70257754809569_1.17763954747616 chr3 98013598 98014913 + 1.17763954747616 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 717 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_109_119_-0.415113273830825_6.69933395869311_1.17763954747616 chr13 6192191 6193682 + 1.17763954747616 NA Intergenic Intergenic 331447 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_255_251_-0.275459797575098_7.83955002471237_1.17705310782347 chr8 123504128 123506140 + 1.17705310782347 NA TTS (NM_001170975) TTS (NM_001170975) 10321 NM_001170975 72185 Mm.27925 NM_028146 ENSMUSG00000031970 Dbndd1 2810427I04Rik|D8Ertd590e dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding common_peak2_154_97_0.368341614618208_6.79888065142431_1.17612370277554 chr1 172148170 172149101 + 1.17612370277554 NA intron (NM_001357204, intron 1 of 13) intron (NM_001357204, intron 1 of 13) 620 NM_001357204 98193 Mm.159915 NM_153555 ENSMUSG00000026554 Dcaf8 AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a DDB1 and CUL4 associated factor 8 protein-coding common_peak1_118_127_-0.395565072662662_6.80221746366867_1.17612370277554 chr13 48546057 48546572 + 1.17612370277554 NA Intergenic CpG -8042 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak2_48_60_-0.597379194196832_5.63204774046447_1.1755042381992-3 chr5 124424986 124425617 + 1.1755042381992 NA intron (NM_001081203, intron 1 of 31) CpG 301 NM_001359979 243272 Mm.23879 NM_145631 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch 1 protein-coding common_peak2_48_60_-0.597379194196832_5.63204774046447_1.1755042381992-2 chr2 167765444 167766341 + 1.1755042381992 NA Intergenic Intergenic 74715 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak1_72_40_0.546863430947843_5.63098372009201_1.1755042381992 chr11 77814847 77816085 + 1.1755042381992 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 14168 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_48_60_-0.597379194196832_5.63204774046447_1.1755042381992 chr15 52927623 52928362 + 1.1755042381992 NA Intergenic Intergenic 215547 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_72_40_0.546863430947843_5.63098372009201_1.1755042381992 chr14 52022829 52023725 + 1.1755042381992 NA Intergenic Intergenic -2544 NM_027248 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding common_peak1_72_40_0.546863430947843_5.63098372009201_1.1755042381992-2 chr6 30303857 30304630 + 1.1755042381992 NA 5' UTR (NM_001169576, exon 1 of 5) 5' UTR (NM_001169576, exon 1 of 5) 296 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_47_60_-0.626916670690881_5.61727900221745_1.1755042381992-2 chr9 106429551 106430147 + 1.1755042381992 NA 5' UTR (NM_001324534, exon 1 of 3) 5' UTR (NM_001324534, exon 1 of 3) 438 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding common_peak1_47_60_-0.626916670690881_5.61727900221745_1.1755042381992 chr6 66910664 66911567 + 1.1755042381992 NA intron (NM_001177558, intron 1 of 4) intron (NM_001177558, intron 1 of 4) 14224 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak2_72_40_0.546863430947843_5.63098372009201_1.1755042381992-2 chr4 148527350 148527917 + 1.1755042381992 NA intron (NM_020009, intron 34 of 57) intron (NM_020009, intron 34 of 57) -27171 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak2_72_40_0.546863430947843_5.63098372009201_1.1755042381992 chr15 57892032 57892392 + 1.1755042381992 NA exon (NM_024207, exon 1 of 8) exon (NM_024207, exon 1 of 8) 206 NM_024207 67819 Mm.289387 NM_024207 ENSMUSG00000022365 Derl1 1110021N07Rik|AI195141|AW551338|Derlin-1 Der1-like domain family, member 1 protein-coding common_peak2_47_60_-0.626916670690881_5.61727900221745_1.1755042381992 chr1 72779252 72780411 + 1.1755042381992 NA Intergenic Intergenic -44649 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding common_peak1_102_60_0.46685002749534_6.16416235131056_1.17368556177796-3 chr2 72320576 72322045 + 1.17368556177796 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 35609 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_102_60_0.46685002749534_6.16416235131056_1.17368556177796 chr19 58942665 58944090 + 1.17368556177796 NA promoter-TSS (NM_178689) promoter-TSS (NM_178689) -48 NM_178689 226265 Mm.103154 NM_178689 ENSMUSG00000048029 Eno4 6430537H07Rik enolase 4 protein-coding common_peak1_102_60_0.46685002749534_6.16416235131056_1.17368556177796-4 chr6 146909105 146909840 + 1.17368556177796 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 20978 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_102_60_0.46685002749534_6.16416235131056_1.17368556177796 chr18 36287182 36287921 + 1.17368556177796 NA exon (NM_008989, exon 2 of 2) exon (NM_008989, exon 2 of 2) 6389 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak1_102_60_0.46685002749534_6.16416235131056_1.17368556177796-2 chr18 68138824 68140002 + 1.17368556177796 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -88533 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_102_112_-0.422591597356961_6.60888316373671_1.17259772819336 chr6 34779826 34781396 + 1.17259772819336 NA 5' UTR (NM_001289657, exon 1 of 19) 5' UTR (NM_001289657, exon 1 of 19) 179 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak2_136_84_0.396824637978078_6.60780325512674_1.17259772819336 chr7 143690662 143691993 + 1.17259772819336 NA intron (NM_001199227, intron 21 of 21) intron (NM_001199227, intron 21 of 21) -5452 NR_131763 79201 Mm.290780 NM_024290 ENSMUSG00000037613 Tnfrsf23 SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB tumor necrosis factor receptor superfamily, member 23 protein-coding common_peak2_102_112_-0.422591597356961_6.60888316373671_1.17259772819336 chr10 80622816 80624157 + 1.17259772819336 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 706 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak2_176_112_0.353002745561701_6.99668033519604_1.17189516658598 chr9 80066578 80067857 + 1.17189516658598 NA 5' UTR (NM_146003, exon 1 of 23) 5' UTR (NM_146003, exon 1 of 23) 314 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak2_269_264_-0.271754758943011_7.91397116997906_1.17081933565591 chr19 53389417 53390628 + 1.17081933565591 NA promoter-TSS (NM_001356986) promoter-TSS (NM_001356986) 19 NM_001356986 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_166_105_0.361951917463346_6.90889641329487_1.16931963083322 chr5 151188522 151190490 + 1.16931963083322 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 687 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_146_91_0.383576809963252_6.71535036103864_1.16927723988528 chr1 75191352 75192999 + 1.16927723988528 NA promoter-TSS (NM_026187) promoter-TSS (NM_026187) 15 NR_051998 52231 Mm.259326 NM_026187 ENSMUSG00000026199 Ankzf1 1300008P06Rik|2810025E10Rik|D1Ertd161e ankyrin repeat and zinc finger domain containing 1 protein-coding common_peak2_128_78_0.41624240468654_6.51190195052037_1.16922519370489 chr10 80164055 80165481 + 1.16922519370489 NA intron (NR_038088, intron 1 of 4) CpG -3071 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_94_105_-0.446155080837418_6.50484291414449_1.16922519370489 chr9 92249851 92250984 + 1.16922519370489 NA intron (NM_011636, intron 1 of 8) CpG 223 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding common_peak1_127_78_0.40509435732096_6.50632792683758_1.16922519370489-2 chr3 98379557 98380646 + 1.16922519370489 NA Intergenic Intergenic -2380 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_127_78_0.40509435732096_6.50632792683758_1.16922519370489 chr1 64531893 64533210 + 1.16922519370489 NA promoter-TSS (NM_009952) promoter-TSS (NM_009952) -253 NM_009952 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak2_127_78_0.40509435732096_6.50632792683758_1.16922519370489 chr8 119910772 119911676 + 1.16922519370489 NA intron (NM_009462, intron 1 of 13) CpG 864 NM_001310630 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding common_peak2_110_66_0.438652173253881_6.28541527708471_1.16916033364217-3 chr9 44482808 44483778 + 1.16916033364217 NA 5' UTR (NM_001357490, exon 1 of 8) 5' UTR (NM_001357490, exon 1 of 8) 468 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_110_66_0.438652173253881_6.28541527708471_1.16916033364217 chr10 63022924 63023760 + 1.16916033364217 NA intron (NM_001079824, intron 1 of 9) CpG 507 NM_001079824 432467 Mm.274784 NM_001079824 ENSMUSG00000020069 Hnrnph3 AA693301|AI666703|Hnrph3 heterogeneous nuclear ribonucleoprotein H3 protein-coding common_peak2_110_66_0.438652173253881_6.28541527708471_1.16916033364217-2 chr3 108444194 108445118 + 1.16916033364217 NA intron (NM_011319, intron 1 of 11) intron (NM_011319, intron 1 of 11) 603 NM_011319 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding common_peak2_66_78_-0.522227730536716_6.04266688290875_1.16907810239195-3 chr3 130950839 130951692 + 1.16907810239195 NA Intergenic Intergenic -159032 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_94_55_0.474410451668177_6.04456014789169_1.16907810239195 chr8 107205449 107207078 + 1.16907810239195 NA Intergenic Intergenic -49901 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak2_66_78_-0.522227730536716_6.04266688290875_1.16907810239195-4 chr7 113368729 113370036 + 1.16907810239195 NA promoter-TSS (NM_133700) promoter-TSS (NM_133700) -43 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak2_66_78_-0.522227730536716_6.04266688290875_1.16907810239195 chr13 95549011 95549786 + 1.16907810239195 NA Intergenic Intergenic -24158 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak2_66_78_-0.522227730536716_6.04266688290875_1.16907810239195-2 chr15 32264024 32265099 + 1.16907810239195 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 19748 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding common_peak2_54_66_-0.567256889106833_5.78246074590436_1.1689717347007 chr11 53519534 53520478 + 1.1689717347007 NA promoter-TSS (NM_001361969) promoter-TSS (NM_001361969) -182 NM_001361969 20362 Mm.274399 NM_033144 ENSMUSG00000018398 Sept8 AW046166|Sepl septin 8 protein-coding common_peak1_79_45_0.512025027768173_5.7795744699411_1.16897173470069-3 chr9 75037810 75038760 + 1.16897173470069 NA intron (NR_152135, intron 2 of 4) intron (NR_152135, intron 2 of 4) 553 NM_021548 59046 Mm.247837 NM_021548 ENSMUSG00000007656 Arpp19 19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12 cAMP-regulated phosphoprotein 19 protein-coding common_peak2_80_45_0.529820497070601_5.78847220459231_1.16897173470069-2 chr4 62407967 62408573 + 1.16897173470069 NA promoter-TSS (NM_027297) promoter-TSS (NM_027297) 353 NM_139291 66440 Mm.109930 NM_139291 ENSMUSG00000066149 Cdc26 2010012C09Rik cell division cycle 26 protein-coding common_peak2_79_45_0.512025027768173_5.7795744699411_1.16897173470069-2 chr17 31565044 31565854 + 1.16897173470069 NA intron (NM_016670, intron 1 of 10) CpG 676 NM_016670 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak1_79_45_0.512025027768173_5.7795744699411_1.16897173470069 chr5 137313534 137314267 + 1.16897173470069 NA TTS (NM_031406) TTS (NM_031406) 341 NM_011639 22051 Mm.27063 NM_011639 ENSMUSG00000023348 Trip6 - thyroid hormone receptor interactor 6 protein-coding common_peak1_80_45_0.529820497070601_5.78847220459231_1.16897173470069 chr17 46711504 46712400 + 1.16897173470069 NA exon (NM_145488, exon 1 of 17) exon (NM_145488, exon 1 of 17) 489 NM_145488 224824 Mm.299399 NM_145488 ENSMUSG00000002763 Pex6 AI132582|D130055I09Rik|mKIAA4177 peroxisomal biogenesis factor 6 protein-coding common_peak1_79_45_0.512025027768173_5.7795744699411_1.16897173470069-2 chr9 58313428 58314421 + 1.16897173470069 NA promoter-TSS (NM_010729) promoter-TSS (NM_010729) -712 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak2_80_45_0.529820497070601_5.78847220459231_1.16897173470069 chr15 86066487 86067276 + 1.16897173470069 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 8154 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_79_45_0.512025027768173_5.7795744699411_1.16897173470069 chr11 114829354 114830239 + 1.16897173470069 NA Intergenic Intergenic -21736 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding common_peak1_80_45_0.529820497070601_5.78847220459231_1.16897173470069-2 chr4 124692642 124693552 + 1.16897173470069 NA intron (NM_026031, intron 1 of 7) intron (NM_026031, intron 1 of 7) 457 NM_026031 67205 Mm.259121 NM_026031 ENSMUSG00000028907 Utp11 2700082D03Rik|CGI-94|Cgi94|Utp11l UTP11 small subunit processome component protein-coding common_peak1_80_45_0.529820497070601_5.78847220459231_1.16897173470069-3 chr6 56831693 56832728 + 1.16897173470069 NA exon (NM_012056, exon 1 of 10) exon (NM_012056, exon 1 of 10) 151 NM_012056 27055 Mm.20943 NM_012056 ENSMUSG00000029781 Fkbp9 1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS FK506 binding protein 9 protein-coding common_peak2_66_36_0.572099652011437_5.49550319163467_1.16883084967253-2 chr14 70100192 70100640 + 1.16883084967253 NA intron (NM_021328, intron 1 of 8) intron (NM_021328, intron 1 of 8) 323 NM_001360404 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding common_peak1_66_36_0.572099652011437_5.49550319163467_1.16883084967253-3 chr8 26824865 26825544 + 1.16883084967253 NA promoter-TSS (NR_045904) promoter-TSS (NR_045904) -781 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_66_36_0.572099652011437_5.49550319163467_1.16883084967253-2 chr18 52638943 52639483 + 1.16883084967253 NA exon (NM_025749, exon 2 of 2) exon (NM_025749, exon 2 of 2) -7007 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding common_peak1_66_36_0.572099652011437_5.49550319163467_1.16883084967253-4 chr8 69973705 69974166 + 1.16883084967253 NA intron (NM_001286450, intron 1 of 12) CpG 448 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_66_36_0.572099652011437_5.49550319163467_1.16883084967253 chr1 133953610 133954187 + 1.16883084967253 NA Intergenic Intergenic -32497 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak2_66_36_0.572099652011437_5.49550319163467_1.16883084967253 chr11 109610502 109611192 + 1.16883084967253 NA intron (NM_145940, intron 1 of 12) intron (NM_145940, intron 1 of 12) 542 NM_145940 52639 Mm.35817 NM_145940 ENSMUSG00000041895 Wipi1 4930533H01Rik|AW411817|D11Ertd498e WD repeat domain, phosphoinositide interacting 1 protein-coding common_peak2_43_55_-0.628179519460543_5.49326516232733_1.16883084967252-2 chr9 23222571 23223214 + 1.16883084967252 NA promoter-TSS (NM_028472) promoter-TSS (NM_028472) -184 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak2_43_55_-0.628179519460543_5.49326516232733_1.16883084967252 chr4 89040342 89041278 + 1.16883084967252 NA Intergenic Intergenic -9497 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak1_43_55_-0.628179519460543_5.49326516232733_1.16883084967252 chr17 36837217 36837577 + 1.16883084967252 NA intron (NM_001286726, intron 1 of 9) CpG 251 NM_001286726 22670 Mm.34587 NM_030698 ENSMUSG00000024457 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif-containing 26 protein-coding common_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394-2 chr10 32889725 32890380 + 1.16863888781394 NA promoter-TSS (NM_001013411) promoter-TSS (NM_001013411) -137 NM_001025286 432450 Mm.49665 NM_001013411 ENSMUSG00000069670 Nkain2 6330571D19Rik|AW455467|Tcba1 Na+/K+ transporting ATPase interacting 2 protein-coding unique_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394 chr1 133842523 133843210 + 1.16863888781394 NA Intergenic Intergenic 64307 NM_054076 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding unique_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394-2 chr17 46270047 46270898 + 1.16863888781394 NA intron (NM_001252475, intron 1 of 8) intron (NM_001252475, intron 1 of 8) 12554 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_33_45_-0.713731098720562_5.16669640669673_1.16863888781394 chr11 65807280 65807648 + 1.16863888781394 NA intron (NM_001302374, intron 1 of 6) CpG 289 NM_001302375 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding unique_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394-3 chr2 147011651 147012359 + 1.16863888781394 NA promoter-TSS (NM_011917) promoter-TSS (NM_011917) -994 NM_001356403 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak1_33_45_-0.713731098720562_5.16669640669673_1.16863888781394-3 chr8 33385629 33386151 + 1.16863888781394 NA promoter-TSS (NM_001098233) promoter-TSS (NM_001098233) -363 NM_011721 22427 Mm.228805 NM_011721 ENSMUSG00000031583 Wrn AI846146 Werner syndrome RecQ like helicase protein-coding common_peak2_33_45_-0.713731098720562_5.16669640669673_1.16863888781394 chr1 64932439 64933061 + 1.16863888781394 NA intron (NM_001039493, intron 2 of 7) B3|SINE|B2 24074 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394-4 chr5 146948701 146949426 + 1.16863888781394 NA intron (NM_025652, intron 1 of 8) (CAGGG)n|Simple_repeat|Simple_repeat 406 NM_025652 66596 Mm.196528 NM_025652 ENSMUSG00000016503 Gtf3a 2010015D03Rik|2610111I01Rik|5330403M05Rik general transcription factor III A protein-coding common_peak2_54_28_0.640851306223367_5.17840664823926_1.16863888781394 chr5 100518567 100519398 + 1.16863888781394 NA intron (NM_001359203, intron 1 of 8) intron (NM_001359203, intron 1 of 8) 673 NM_001359204 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e|SGN4 COP9 signalosome subunit 4 protein-coding unique_peak2_33_45_-0.713731098720562_5.16669640669673_1.16863888781394 chr7 45923907 45924592 + 1.16863888781394 NA Intergenic Intergenic -2823 NM_010129 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394-5 chr8 94052272 94052744 + 1.16863888781394 NA intron (NM_001093757, intron 4 of 11) intron (NM_001093757, intron 4 of 11) 15310 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak1_33_45_-0.713731098720562_5.16669640669673_1.16863888781394-2 chr4 8647173 8647489 + 1.16863888781394 NA Intergenic CpG -43075 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_33_45_-0.713731098720562_5.16669640669673_1.16863888781394-2 chr11 70655711 70656177 + 1.16863888781394 NA Intergenic CpG-2177 -1232 NM_001136062 13808 Mm.251322 NM_007933 ENSMUSG00000060600 Eno3 Eno-3|MSE enolase 3, beta muscle protein-coding common_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394-3 chr5 91533154 91533878 + 1.16863888781394 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 15816 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak2_33_45_-0.713731098720562_5.16669640669673_1.16863888781394-3 chr13 42352009 42352620 + 1.16863888781394 NA Intergenic Intergenic 50838 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_54_28_0.640851306223367_5.17840664823926_1.16863888781394 chr1 89817063 89817800 + 1.16863888781394 NA intron (NM_001037136, intron 12 of 16) intron (NM_001037136, intron 12 of 16) 113745 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding unique_peak1_43_21_0.719743783959763_4.81930351061718_1.16836819221353 chr10 87884604 87885346 + 1.16836819221353 NA intron (NM_001111274, intron 2 of 4) intron (NM_001111274, intron 2 of 4) 23864 NM_001111276 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353-5 chr19 34607525 34607731 + 1.16836819221353 NA promoter-TSS (NM_001005858) promoter-TSS (NM_001005858) -329 NM_001005858 667370 Mm.271850 NM_001005858 ENSMUSG00000062488 Ifit3b I830012O16Rik interferon-induced protein with tetratricopeptide repeats 3B protein-coding common_peak2_43_21_0.719743783959763_4.81930351061718_1.16836819221353-3 chr7 123083693 123084098 + 1.16836819221353 NA Intergenic Intergenic -39990 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353 chr10 76902388 76902924 + 1.16836819221353 NA intron (NM_001347216, intron 1 of 15) intron (NM_001347216, intron 1 of 15) 59291 NM_001347216 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding common_peak2_24_36_-0.840099523903398_4.78940360367725_1.16836819221353-2 chr17 78391809 78392448 + 1.16836819221353 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 26024 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353-3 chr11 75630320 75630704 + 1.16836819221353 NA promoter-TSS (NM_008916) promoter-TSS (NM_008916) -508 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding common_peak2_24_36_-0.840099523903398_4.78940360367725_1.16836819221353 chr11 85139228 85139819 + 1.16836819221353 NA intron (NM_001029934, intron 1 of 33) CpG 432 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353-4 chr11 102887741 102888103 + 1.16836819221353 NA 3' UTR (NM_010277, exon 9 of 9) 3' UTR (NM_010277, exon 9 of 9) 2753 NM_025766 66784 Mm.483216 NM_025766 ENSMUSG00000075510 Fam187a 4933439F11Rik family with sequence similarity 187, member A protein-coding unique_peak1_43_21_0.719743783959763_4.81930351061718_1.16836819221353-5 chr5 114377323 114377953 + 1.16836819221353 NA intron (NM_001159941, intron 1 of 6) intron (NM_001159941, intron 1 of 6) 2867 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding unique_peak2_24_36_-0.840099523903398_4.78940360367725_1.16836819221353-2 chr7 90335192 90335874 + 1.16836819221353 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 33178 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak2_24_36_-0.840099523903398_4.78940360367725_1.16836819221353 chr10 19011335 19011993 + 1.16836819221353 NA exon (NM_009397, exon 2 of 9) exon (NM_009397, exon 2 of 9) 299 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak1_43_21_0.719743783959763_4.81930351061718_1.16836819221353-4 chr3 87768445 87769129 + 1.16836819221353 NA intron (NM_152799, intron 1 of 24) (CA)n|Simple_repeat|Simple_repeat 166 NM_001289600 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding unique_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353 chr8 36829825 36830437 + 1.16836819221353 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -97077 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_24_36_-0.840099523903398_4.78940360367725_1.16836819221353-3 chr19 12010446 12010873 + 1.16836819221353 NA Intergenic Intergenic 26081 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353-2 chr11 16559257 16559762 + 1.16836819221353 NA Intergenic Intergenic -51025 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding unique_peak1_43_21_0.719743783959763_4.81930351061718_1.16836819221353-3 chr15 98895744 98896598 + 1.16836819221353 NA intron (NM_007857, intron 1 of 2) intron (NM_007857, intron 1 of 2) 2369 NM_007857 13363 Mm.324688 NM_007857 ENSMUSG00000023000 Dhh C78960 desert hedgehog protein-coding unique_peak1_43_21_0.719743783959763_4.81930351061718_1.16836819221353-2 chr13 45962275 45962846 + 1.16836819221353 NA intron (NM_001199304, intron 1 of 6) intron (NM_001199304, intron 1 of 6) 2431 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_43_21_0.719743783959763_4.81930351061718_1.16836819221353 chr18 46311435 46311727 + 1.16836819221353 NA intron (NM_001160399, intron 1 of 9) intron (NM_001160399, intron 1 of 9) 347 NM_001160399 240261 Mm.329416 NM_001160399 ENSMUSG00000071855 Ccdc112 8430438M01Rik|AW108467 coiled-coil domain containing 112 protein-coding common_peak2_43_21_0.719743783959763_4.81930351061718_1.16836819221353-2 chr3 152813596 152813943 + 1.16836819221353 NA Intergenic Intergenic 99669 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353-6 chr5 124439095 124439580 + 1.16836819221353 NA promoter-TSS (NM_030241) promoter-TSS (NM_030241) -593 NM_030241 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_24_36_-0.840099523903398_4.78940360367725_1.16836819221353 chr2 121271038 121271345 + 1.16836819221353 NA intron (NM_013735, intron 1 of 27) CpG 216 NM_001290830 27223 Mm.215389 NM_013735 ENSMUSG00000043909 Trp53bp1 53BP1|Tp53bp1|m53BP1|p53BP1 transformation related protein 53 binding protein 1 protein-coding common_peak2_25_36_-0.783915191173837_4.81749577004203_1.16836819221353-7 chr7 137410504 137410931 + 1.16836819221353 NA promoter-TSS (NM_029886) promoter-TSS (NM_029886) 39 NM_029886 77252 Mm.29184 NM_029886 ENSMUSG00000040139 9430038I01Rik - RIKEN cDNA 9430038I01 gene protein-coding common_peak2_24_36_-0.840099523903398_4.78940360367725_1.16836819221353-4 chr5 114897042 114897657 + 1.16836819221353 NA 5' UTR (NM_011854, exon 1 of 6) 5' UTR (NM_011854, exon 1 of 6) 415 NM_001359181 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding common_peak2_43_21_0.719743783959763_4.81930351061718_1.16836819221353-4 chr7 130977278 130977835 + 1.16836819221353 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 41353 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_156_98_0.372060690944797_6.81538696555201_1.16833330120273 chr1 36938791 36940368 + 1.16833330120273 NA promoter-TSS (NM_018872) promoter-TSS (NM_018872) -52 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-8 chr7 142385747 142386311 + 1.16796998271032 NA intron (NM_009983, intron 1 of 8) intron (NM_009983, intron 1 of 8) 1841 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-9 chr8 12802056 12802652 + 1.16796998271032 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 29565 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-2 chr10 70287542 70288266 + 1.16796998271032 NA Intergenic Intergenic 42628 NM_025807 66859 Mm.19325 NM_025807 ENSMUSG00000037762 Slc16a9 1200003C15Rik|4930425B13Rik|AI552636 solute carrier family 16 (monocarboxylic acid transporters), member 9 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-5 chr19 53011409 53011950 + 1.16796998271032 NA promoter-TSS (NR_105834) promoter-TSS (NR_105834) -923 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-6 chr6 50411267 50411688 + 1.16796998271032 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -28640 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-8 chr7 110109527 110109868 + 1.16796998271032 NA Intergenic AT_rich|Low_complexity|Low_complexity -12362 NM_001355058 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032 chr10 13323671 13324069 + 1.16796998271032 NA intron (NM_001195065, intron 1 of 12) CpG 419 NM_001195096 215789 Mm.283359 NM_001033257 ENSMUSG00000062866 Phactr2 AV158170|BC012871 phosphatase and actin regulator 2 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-7 chr7 15963085 15963561 + 1.16796998271032 NA intron (NM_153068, intron 3 of 5) GC_rich|Low_complexity|Low_complexity 4212 NM_153068 259300 Mm.138215 NM_153068 ENSMUSG00000074364 Ehd2 BC027084|C130052H20Rik EH-domain containing 2 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-9 chr8 14321912 14322247 + 1.16796998271032 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 226204 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-10 chr9 32742837 32743497 + 1.16796998271032 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 47125 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-5 chr16 55539784 55540403 + 1.16796998271032 NA Intergenic Intergenic 45362 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032 chr11 116820701 116821157 + 1.16796998271032 NA intron (NM_001347633, intron 1 of 4) L3|LINE|CR1 7117 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-6 chr6 142347381 142347635 + 1.16796998271032 NA intron (NM_183165, intron 1 of 11) intron (NM_183165, intron 1 of 11) 1811 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-4 chr17 70993948 70994256 + 1.16796998271032 NA 3' UTR (NM_001357820, exon 4 of 4) 3' UTR (NM_001357820, exon 4 of 4) -3586 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-7 chr7 5062895 5063223 + 1.16796998271032 NA intron (NM_001205231, intron 1 of 11) intron (NM_001205231, intron 1 of 11) 916 NM_001205231 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-2 chr12 108397431 108398083 + 1.16796998271032 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -12876 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-3 chr14 54433173 54433598 + 1.16796998271032 NA intron (NM_008608, intron 1 of 9) intron (NM_008608, intron 1 of 9) 1787 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-3 chr13 75791223 75791862 + 1.16796998271032 NA Intergenic Intergenic -48343 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_33_15_0.809830857336451_4.40491542866823_1.16796998271032 chr19 57273866 57274167 + 1.16796998271032 NA promoter-TSS (NR_045319) promoter-TSS (NR_045319) 56 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA unique_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-11 chrX 57053341 57053732 + 1.16796998271032 NA promoter-TSS (NM_029371) promoter-TSS (NM_029371) -34 NM_028242 72459 Mm.2152 NM_028242 ENSMUSG00000067873 Htatsf1 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1 HIV TAT specific factor 1 protein-coding common_peak1_33_15_0.809830857336451_4.40491542866823_1.16796998271032-4 chr15 37200853 37201144 + 1.16796998271032 NA Intergenic Intergenic -32038 NM_026496 252973 Mm.244612 NM_026496 ENSMUSG00000022286 Grhl2 0610015A08Rik|BOM|Tcfcp2l3|clft3 grainyhead like transcription factor 2 protein-coding common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-2 chr14 22965221 22965520 + 1.16796998271031 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 129201 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031 chr1 151350443 151350774 + 1.16796998271031 NA intron (NM_001359263, intron 2 of 13) intron (NM_001359263, intron 2 of 13) 6110 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-8 chrX 13845822 13846265 + 1.16796998271031 NA exon (NM_001284504, exon 1 of 24) exon (NM_001284504, exon 1 of 24) 513 NM_001284505 12361 Mm.327591 NM_009806 ENSMUSG00000031012 Cask DXPri1|DXRib1|LIN-2|Pals3|mLin-2 calcium/calmodulin-dependent serine protein kinase (MAGUK family) protein-coding unique_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-3 chr3 18624631 18625285 + 1.16796998271031 NA Intergenic Intergenic -144481 NR_040544 73959 Mm.60616 NR_040544 ENSMUSG00000102699 4930433B08Rik - RIKEN cDNA 4930433B08 gene ncRNA common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-7 chr8 64524842 64525325 + 1.16796998271031 NA Intergenic Intergenic -10642 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-2 chr8 36899328 36899596 + 1.16796998271031 NA intron (NM_001194940, intron 2 of 17) intron (NM_001194940, intron 2 of 17) 52980 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_17_28_-0.959214766881623_4.37837361168676_1.16796998271031 chr19 40995651 40995938 + 1.16796998271031 NA Intergenic Intergenic -1259 NM_008528 17060 Mm.9749 NM_008528 ENSMUSG00000061132 Blnk BASH|Bca|Ly-57|Ly57|Lyw-57|SLP-65 B cell linker protein-coding common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-4 chr2 105904145 105904443 + 1.16796998271031 NA promoter-TSS (NM_028260) promoter-TSS (NM_028260) 270 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-5 chr4 59238752 59239083 + 1.16796998271031 NA Intergenic Intergenic -21134 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-3 chr17 6142090 6142520 + 1.16796998271031 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 4157 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-6 chr4 89445445 89445703 + 1.16796998271031 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -134542 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-4 chr5 30013321 30013652 + 1.16796998271031 NA exon (NM_031168, exon 2 of 5) exon (NM_031168, exon 2 of 5) 372 NM_031168 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding unique_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031 chr1 16007420 16007767 + 1.16796998271031 NA Intergenic Intergenic 85732 NM_001243238 75799 Mm.78557 NM_001243238 ENSMUSG00000067795 4930444P10Rik - RIKEN cDNA 4930444P10 gene protein-coding unique_peak2_17_28_-0.959214766881623_4.37837361168676_1.16796998271031-2 chr15 102006617 102006950 + 1.16796998271031 NA Intergenic Intergenic -2441 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak1_87_98_-0.457236197055794_6.40073852155171_1.16790778515003 chr19 4148624 4149303 + 1.16790778515003 NA intron (NM_011778, intron 1 of 10) intron (NM_011778, intron 1 of 10) 300 NM_011778 23789 Mm.276859 NM_011778 ENSMUSG00000024835 Coro1b - coronin, actin binding protein 1B protein-coding common_peak1_119_72_0.426598027172624_6.40312357246633_1.16790778515001 chr19 5728936 5730213 + 1.16790778515001 NA promoter-TSS (NM_181452) promoter-TSS (NM_181452) 92 NM_181452 17826 Mm.391142 NM_023166 ENSMUSG00000024939 Fam89b 1110021A21Rik|MMTV|Mtvr2 family with sequence similarity 89, member B protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-19 chr4 148488127 148488513 + 1.16735254179725 NA intron (NM_020009, intron 25 of 57) tRNA-Ala-GCA|tRNA|tRNA 12142 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-13 chr4 55001952 55002421 + 1.16735254179725 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 54241 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-9 chr5 67306502 67306750 + 1.16735254179725 NA promoter-TSS (NM_001310629) promoter-TSS (NM_001310629) -329 NM_178651 109108 Mm.234455 NM_178651 ENSMUSG00000029221 Slc30a9 2310024J23Rik|AL024256|GAC63|HUEL|znT-9 solute carrier family 30 (zinc transporter), member 9 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-24 chr7 141564919 141565183 + 1.16735254179725 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 2871 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-14 chr2 155073818 155074084 + 1.16735254179725 NA intron (NM_016661, intron 1 of 9) intron (NM_016661, intron 1 of 9) 546 NM_016661 269378 Mm.330692 NM_016661 ENSMUSG00000027597 Ahcy AA987153|AL024110|CuBP|SAHH S-adenosylhomocysteine hydrolase protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-11 chr9 108347403 108347596 + 1.16735254179725 NA promoter-TSS (NM_001311157) promoter-TSS (NM_001311157) -332 NM_001311157 22258 Mm.3974 NM_011678 ENSMUSG00000032612 Usp4 F730026I20Rik|Unp|mKIAA4155 ubiquitin specific peptidase 4 (proto-oncogene) protein-coding common_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-4 chr13 41457583 41457903 + 1.16735254179725 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 29617 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-4 chr4 133600237 133600552 + 1.16735254179725 NA TTS (NM_018754) TTS (NM_018754) 1774 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_25_10_0.966106555817816_3.94248489654621_1.16735254179725 chr10 88201238 88201487 + 1.16735254179725 NA intron (NM_026070, intron 1 of 6) intron (NM_026070, intron 1 of 6) 265 NM_027487 67282 Mm.208465 NM_026070 ENSMUSG00000020056 Washc3 2900091E11Rik|5730495F03Rik|Ccdc53 WASH complex subunit 3 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-20 chr7 49701321 49701620 + 1.16735254179725 NA Intergenic Intergenic -57636 NM_001146053 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding common_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-3 chr12 79253453 79253782 + 1.16735254179725 NA intron (NM_001008550, intron 29 of 41) intron (NM_001008550, intron 29 of 41) 42665 NM_001008550 211978 Mm.297919 NM_001008550 ENSMUSG00000066440 Zfyve26 4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321 zinc finger, FYVE domain containing 26 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-15 chr3 107862244 107862534 + 1.16735254179725 NA Intergenic Intergenic -14841 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-19 chr7 16419954 16420371 + 1.16735254179725 NA exon (NM_198631, exon 4 of 14) exon (NM_198631, exon 4 of 14) 18966 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-7 chr16 45848732 45849153 + 1.16735254179725 NA Intergenic Intergenic -4191 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725 chr1 78745249 78745603 + 1.16735254179725 NA Intergenic Intergenic -71485 NM_021342 57814 Mm.24386 NM_021342 ENSMUSG00000047330 Kcne4 AW487937|MiRP3 potassium voltage-gated channel, Isk-related subfamily, gene 4 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-6 chr16 75766955 75767443 + 1.16735254179725 NA promoter-TSS (NM_030201) promoter-TSS (NM_030201) -381 NM_030201 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-16 chr3 121553470 121553887 + 1.16735254179725 NA Intergenic Intergenic -21334 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-25 chr8 109958579 109958880 + 1.16735254179725 NA intron (NM_028584, intron 2 of 2) intron (NM_028584, intron 2 of 2) 3476 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak2_25_10_0.966106555817816_3.94248489654621_1.16735254179725-3 chr8 123691668 123691906 + 1.16735254179725 NA Intergenic Intergenic 37858 NM_133955 69581 Mm.168257 NM_133955 ENSMUSG00000039960 Rhou 2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K ras homolog family member U protein-coding common_peak2_24_10_0.909922223088254_3.91439273018142_1.16735254179725-3 chr2 38822396 38822791 + 1.16735254179725 NA intron (NM_010264, intron 3 of 10) intron (NM_010264, intron 3 of 10) -30142 NR_029568 387176 NR_029568 ENSMUSG00000065423 Mir181a-2 Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a|mir-181a-2 microRNA 181a-2 ncRNA unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-4 chr10 121903895 121904160 + 1.16735254179725 NA intron (NM_001081037, intron 3 of 21) intron (NM_001081037, intron 3 of 21) 143288 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-22 chr9 15709680 15710092 + 1.16735254179725 NA intron (NM_172289, intron 1 of 10) CpG 148 NM_172289 234967 Mm.138815 NM_172289 ENSMUSG00000043885 Slc36a4 6330573I15Rik|PAT4 solute carrier family 36 (proton/amino acid symporter), member 4 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-3 chr11 102465586 102465912 + 1.16735254179725 NA exon (NM_010575, exon 9 of 30) exon (NM_010575, exon 9 of 30) 4134 NM_010575 16399 Mm.26646 NM_010575 ENSMUSG00000034664 Itga2b AI172977|CD41|CD41B|GpIIb|alphaIIb integrin alpha 2b protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-22 chr5 139012248 139012490 + 1.16735254179725 NA Intergenic Intergenic -17416 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-17 chr3 122986757 122987095 + 1.16735254179725 NA Intergenic Intergenic -2479 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-4 chr17 33817411 33817659 + 1.16735254179725 NA exon (NM_030697, exon 3 of 11) exon (NM_030697, exon 3 of 11) 7012 NM_030697 80880 Mm.196330 NM_030697 ENSMUSG00000042099 Kank3 0610013D04Rik|Ankrd47|D17Ertd288e|NG28 KN motif and ankyrin repeat domains 3 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-6 chr5 125409209 125409423 + 1.16735254179725 NA Intergenic Intergenic -19299 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725 chr10 77388207 77388673 + 1.16735254179725 NA intron (NM_001024838, intron 1 of 11) intron (NM_001024838, intron 1 of 11) 29833 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-20 chr5 36678434 36678834 + 1.16735254179725 NA intron (NM_001081232, intron 1 of 8) intron (NM_001081232, intron 1 of 8) 17387 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-9 chr19 4221217 4221442 + 1.16735254179725 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) 6940 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-2 chr11 72083536 72083874 + 1.16735254179725 NA intron (NM_001081641, intron 3 of 18) intron (NM_001081641, intron 3 of 18) 41203 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding common_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-5 chr17 8801765 8802130 + 1.16735254179725 NA 5' UTR (NM_011866, exon 1 of 22) 5' UTR (NM_011866, exon 1 of 22) 202 NM_011866 23984 Mm.87161 NM_011866 ENSMUSG00000023868 Pde10a - phosphodiesterase 10A protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-3 chr1 163671492 163671856 + 1.16735254179725 NA Intergenic Intergenic 53558 NM_001143956 240879 Mm.484621 NM_001143956 ENSMUSG00000040113 Mettl11b Gm207|NTM1B methyltransferase like 11B protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-14 chr4 63494562 63494963 + 1.16735254179725 NA exon (NM_028640, exon 1 of 12) exon (NM_028640, exon 1 of 12) 1229 NM_001008793 73750 Mm.300397 NM_028640 ENSMUSG00000039137 Whrn 1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|Ush2d|wi whirlin protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-2 chr1 184083465 184083765 + 1.16735254179725 NA Intergenic Intergenic 49234 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-11 chr2 110188886 110189224 + 1.16735254179725 NA Intergenic Intergenic 116670 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-10 chr2 128444733 128445153 + 1.16735254179725 NA Intergenic Intergenic -15592 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-7 chr17 34931405 34931610 + 1.16735254179725 NA exon (NM_010893, exon 1 of 6) exon (NM_010893, exon 1 of 6) 254 NM_010893 18010 Mm.8856 NM_010893 ENSMUSG00000007038 Neu1 AA407268|AA407316|Aglp|Apl|Bat-7|Bat7|G9|Map-2|Neu|Neu-1 neuraminidase 1 protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725 chr1 39367119 39367462 + 1.16735254179725 NA promoter-TSS (NM_001252218) promoter-TSS (NM_001252218) -561 NM_053257 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-9 chr2 122028016 122028349 + 1.16735254179725 NA promoter-TSS (NM_144545) promoter-TSS (NM_144545) -398 NM_144545 78655 Mm.458184 NM_144545 ENSMUSG00000027236 Eif3j1 1810016I04Rik|2700079K05Rik|AA409117|AA409446|C78575|Eif3j|Eif3j-1|Eif3j-2|Eif3j2|Eif3s1|eIF-3-alpha-A|eIF-3-alpha-B|eIF3-alpha|eIF3-p35|eIF3j-A|eIF3j-B eukaryotic translation initiation factor 3, subunit J1 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-23 chr6 90382067 90382336 + 1.16735254179725 NA exon (NM_030260, exon 6 of 6) exon (NM_030260, exon 6 of 6) 12707 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-3 chr11 115381977 115382193 + 1.16735254179725 NA 5' UTR (NM_001080929, exon 1 of 5) 5' UTR (NM_001080929, exon 1 of 5) 169 NM_001080929 237988 Mm.102872 NM_001080929 ENSMUSG00000050910 Cdr2l D030068L24Rik|Gm21 cerebellar degeneration-related protein 2-like protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-18 chr4 34275094 34275779 + 1.16735254179725 NA Intergenic Intergenic -225369 NM_026293 67652 Mm.55848 NM_026293 ENSMUSG00000028264 Spaca1 1700124L11Rik|4930540L03Rik sperm acrosome associated 1 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-3 chr14 13961569 13961815 + 1.16735254179725 NA promoter-TSS (NM_025435) promoter-TSS (NM_025435) 160 NM_001359901 66231 Mm.295875 NM_025435 ENSMUSG00000053453 Thoc7 Nif3l1bp1 THO complex 7 protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-7 chr4 132345469 132345702 + 1.16735254179725 NA intron (NM_133878, intron 1 of 9) CpG 165 NM_001197082 100088 Mm.255045 NM_133878 ENSMUSG00000028896 Rcc1 4931417M11Rik|AI326872|Chc1 regulator of chromosome condensation 1 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-8 chr9 25091048 25091382 + 1.16735254179725 NA Intergenic Intergenic 60566 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-6 chr15 13370845 13371206 + 1.16735254179725 NA Intergenic Intergenic -197350 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-5 chr16 18420687 18421184 + 1.16735254179725 NA intron (NM_007744, intron 1 of 4) intron (NM_007744, intron 1 of 4) -5482 NM_001353143 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725 chr1 43141521 43141841 + 1.16735254179725 NA intron (NM_010212, intron 3 of 5) intron (NM_010212, intron 3 of 5) 22280 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-3 chr11 107417573 107417785 + 1.16735254179725 NA intron (NR_153311, intron 1 of 9) intron (NR_153311, intron 1 of 9) 53041 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-8 chr18 9450457 9450662 + 1.16735254179725 NA promoter-TSS (NM_026484) promoter-TSS (NM_026484) -405 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-2 chr10 78575649 78575846 + 1.16735254179725 NA intron (NM_001359302, intron 1 of 14) intron (NM_001359302, intron 1 of 14) 756 NM_001359303 216136 Mm.2644 NM_173751 ENSMUSG00000032763 Ilvbl 5830463I21|AI415009 ilvB (bacterial acetolactate synthase)-like protein-coding common_peak2_25_10_0.966106555817816_3.94248489654621_1.16735254179725-2 chr2 164804620 164804840 + 1.16735254179725 NA promoter-TSS (NM_178375) promoter-TSS (NM_178375) 151 NM_133240 170789 Mm.277878 NM_133240 ENSMUSG00000017307 Acot8 PTE-2|Pte1 acyl-CoA thioesterase 8 protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-10 chr9 64811716 64811991 + 1.16735254179725 NA intron (NM_001162917, intron 2 of 34) CpG-15087 842 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725 chr1 55088922 55089243 + 1.16735254179725 NA promoter-TSS (NM_001356512) promoter-TSS (NM_001356512) -839 NM_001356512 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-12 chr2 117546191 117546681 + 1.16735254179725 NA Intergenic Intergenic -203559 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-12 chr3 95733781 95734077 + 1.16735254179725 NA TTS (NM_001252653) TTS (NM_001252653) 1044 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-6 chr4 45972568 45972856 + 1.16735254179725 NA promoter-TSS (NM_001355189) promoter-TSS (NM_001355189) -119 NM_001355189 100121 Mm.275413 NM_146142 ENSMUSG00000035517 Tdrd7 5730495N10Rik|AI447470|PCTAIRE2BP tudor domain containing 7 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-16 chr4 150822077 150822393 + 1.16735254179725 NA Intergenic Intergenic -31561 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-21 chr5 88983600 88983872 + 1.16735254179725 NA intron (NM_001359211, intron 3 of 26) intron (NM_001359211, intron 3 of 26) -44230 NM_001359212 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-2 chr1 126671143 126671435 + 1.16735254179725 NA intron (NM_176957, intron 2 of 12) intron (NM_176957, intron 2 of 12) 159343 NM_176957 210356 Mm.377234 NM_172484 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5 NCK-associated protein 5 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-5 chr5 103435723 103436352 + 1.16735254179725 NA intron (NM_011204, intron 1 of 47) intron (NM_011204, intron 1 of 47) 10845 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-23 chr9 106454906 106455402 + 1.16735254179725 NA intron (NM_021567, intron 1 of 12) intron (NM_021567, intron 1 of 12) 1316 NM_021567 59092 Mm.286394 NM_021567 ENSMUSG00000023495 Pcbp4 1200003L19Rik|AlphaCP-4 poly(rC) binding protein 4 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-15 chr4 124571747 124572123 + 1.16735254179725 NA intron (NR_045819, intron 2 of 2) intron (NR_045819, intron 2 of 2) 2756 NR_045819 108809 Mm.250313 NR_045819 4933407E24Rik - RIKEN cDNA 4933407E24 gene ncRNA unique_peak1_11_21_-1.1415009926188_3.8886811223279_1.16735254179725 chr16 34927307 34927640 + 1.16735254179725 NA intron (NM_139300, intron 16 of 31) intron (NM_139300, intron 16 of 31) 11856 NR_040536 76649 Mm.420532 NR_040536 ENSMUSG00000100593 1700119H24Rik - RIKEN cDNA 1700119H24 gene ncRNA unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-27 chr9 98280189 98280682 + 1.16735254179725 NA Intergenic Intergenic -16135 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-18 chr6 39013894 39014210 + 1.16735254179725 NA intron (NM_011539, intron 5 of 12) intron (NM_011539, intron 5 of 12) 53534 NR_040523 69986 Mm.490941 NR_040523 ENSMUSG00000100121 1700025N23Rik - RIKEN cDNA 1700025N23 gene ncRNA common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-5 chr4 45474194 45474557 + 1.16735254179725 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 56453 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-11 chr3 61441215 61441556 + 1.16735254179725 NA Intergenic Intergenic 76878 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-26 chr9 70260870 70261372 + 1.16735254179725 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 53771 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-8 chr19 29743503 29743998 + 1.16735254179725 NA intron (NM_172836, intron 3 of 7) intron (NM_172836, intron 3 of 7) 45809 NM_029993 77836 Mm.138437 NM_029993 ENSMUSG00000024806 Mlana A930034P04Rik|Mart1 melan-A protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-13 chr2 126031323 126031612 + 1.16735254179725 NA intron (NM_029455, intron 11 of 16) intron (NM_029455, intron 11 of 16) -3191 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding common_peak2_24_10_0.909922223088254_3.91439273018142_1.16735254179725-2 chr15 83169789 83170182 + 1.16735254179725 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 2223 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-2 chr12 53297867 53298399 + 1.16735254179725 NA intron (NM_013780, intron 1 of 11) intron (NM_013780, intron 1 of 11) 49456 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-8 chr5 21186356 21186689 + 1.16735254179725 NA intron (NR_153365, intron 1 of 26) intron (NR_153365, intron 1 of 26) 255 NM_001359877 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-10 chr2 31903677 31904224 + 1.16735254179725 NA intron (NM_011836, intron 4 of 27) intron (NM_011836, intron 4 of 27) 16669 NM_011836 23928 Mm.69566 NM_011836 ENSMUSG00000026840 Lamc3 1110064A23Rik|AI562206|AW240805 laminin gamma 3 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-5 chr13 47043956 47044407 + 1.16735254179725 NA promoter-TSS (NM_016785) promoter-TSS (NM_016785) 682 NM_172262 218214 Mm.31259 NM_172262 ENSMUSG00000038080 Kdm1b 4632428N09Rik|AI482520|Aof1 lysine (K)-specific demethylase 1B protein-coding unique_peak1_24_10_0.909922223088254_3.91439273018142_1.16735254179725-4 chr15 10768877 10769297 + 1.16735254179725 NA non-coding (NR_045063, exon 5 of 7) non-coding (NR_045063, exon 5 of 7) 54187 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak2_24_10_0.909922223088254_3.91439273018142_1.16735254179725 chr12 24572486 24572774 + 1.16735254179725 NA intron (NM_001161406, intron 1 of 15) CpG 343 NM_001161406 195733 Mm.263068 NM_145890 ENSMUSG00000020656 Grhl1 LBP-32|MGR|Tcfcp2l2 grainyhead like transcription factor 1 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725-7 chr8 69822449 69822822 + 1.16735254179725 NA promoter-TSS (NM_020028) promoter-TSS (NM_020028) 70 NM_020028 53978 Mm.23253 NM_020028 ENSMUSG00000031861 Lpar2 Edg4|IPA2|LPA2 lysophosphatidic acid receptor 2 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-17 chr6 28479624 28479974 + 1.16735254179725 NA promoter-TSS (NM_019776) promoter-TSS (NM_019776) -549 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding common_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-2 chr11 8424790 8425125 + 1.16735254179725 NA Intergenic Intergenic 239578 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_11_21_-1.1415009926188_3.8886811223279_1.16735254179725 chr10 24316923 24317343 + 1.16735254179725 NA Intergenic Intergenic 93616 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_25_10_0.966106555817816_3.94248489654621_1.16735254179725-21 chr8 39162282 39162754 + 1.16735254179725 NA intron (NM_001357306, intron 10 of 10) intron (NM_001357306, intron 10 of 10) -135462 NR_044988 621335 Mm.208080 NR_044988 ENSMUSG00000109827 Gm6213 EG621335 predicted gene 6213 ncRNA common_peak1_87_50_0.49969508105232_5.92227288249765_1.16723008420269 chr8 11387026 11388038 + 1.16723008420269 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -74706 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_60_72_-0.542668489577141_5.91849031409145_1.16723008420268 chr8 117158097 117158738 + 1.16723008420268 NA intron (NM_001081151, intron 1 of 10) CpG 282 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding unique_peak2_60_72_-0.542668489577141_5.91849031409145_1.16723008420268 chr8 94293027 94294311 + 1.16723008420268 NA intron (NM_001357268, intron 4 of 20) intron (NM_001357268, intron 4 of 20) 25063 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-77 chr9 99161442 99161832 + 1.16633110333236 NA Intergenic Intergenic -21426 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-66 chr7 6283527 6283835 + 1.16633110333236 NA Intergenic Intergenic -2899 NM_001024928 384763 Mm.276279 NM_001024928 ENSMUSG00000054893 Zfp667 A830025F02Rik|Mip1|ZNF667 zinc finger protein 667 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-7 chr1 179961008 179961254 + 1.16633110333236 NA promoter-TSS (NM_001033285) promoter-TSS (NM_001033285) 42 NM_001033285 226751 Mm.259655 NM_001033285 ENSMUSG00000026490 Cdc42bpa A930014J19Rik|DMPK-like CDC42 binding protein kinase alpha protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-19 chr19 20604043 20604324 + 1.16633110333236 NA intron (NM_013467, intron 1 of 12) intron (NM_013467, intron 1 of 12) 2215 NM_013467 11668 Mm.250866 NM_013467 ENSMUSG00000053279 Aldh1a1 ALDH-E1|ALHDII|Ahd-2|Ahd2|Aldh1|Aldh1a2|E1|Raldh1 aldehyde dehydrogenase family 1, subfamily A1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-22 chr12 104254129 104254484 + 1.16633110333236 NA TTS (NR_033450) TTS (NR_033450) 6410 NR_033450 546546 Mm.390522 NM_001034870 Serpina3h 6C28|Spi2 serine (or cysteine) peptidase inhibitor, clade A, member 3H pseudo unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-8 chr11 50187116 50187415 + 1.16633110333236 NA intron (NM_026543, intron 3 of 6) intron (NM_026543, intron 3 of 6) 12414 NM_026543 68067 Mm.40828 NM_026543 ENSMUSG00000020381 Mrnip 2900016G09Rik|3010026O09Rik|AI851514|AW475975 MRN complex interacting protein protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-2 chr1 40128984 40129412 + 1.16633110333236 NA Intergenic Intergenic 43105 NM_001360800 16178 Mm.1349 NM_010555 ENSMUSG00000026073 Il1r2 CD121b|Il1r-2 interleukin 1 receptor, type II protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-12 chr10 60803032 60803328 + 1.16633110333236 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 28401 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-33 chr7 66109054 66109289 + 1.16633110333236 NA promoter-TSS (NM_001081163) promoter-TSS (NM_001081163) -344 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-37 chr18 35814355 35814670 + 1.16633110333236 NA Intergenic Intergenic -15276 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-16 chr11 52337649 52337923 + 1.16633110333236 NA Intergenic Intergenic -23076 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-49 chr3 81012450 81012704 + 1.16633110333236 NA Intergenic Intergenic -23839 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-19 chr11 104335806 104336196 + 1.16633110333236 NA intron (NM_001359634, intron 13 of 14) intron (NM_001359634, intron 13 of 14) 104565 NM_001285454 17762 Mm.1287 NM_010838 ENSMUSG00000018411 Mapt AI413597|AW045860|Mtapt|Tau microtubule-associated protein tau protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-57 chr5 43662507 43662962 + 1.16633110333236 NA intron (NM_001359906, intron 1 of 37) intron (NM_001359906, intron 1 of 37) 355 NM_001359903 231214 Mm.44434 NM_172274 ENSMUSG00000039765 Cc2d2a 5730509K17Rik|b2b1035Clo coiled-coil and C2 domain containing 2A protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-29 chr6 42568028 42568327 + 1.16633110333236 NA Intergenic (TTA)n|Simple_repeat|Simple_repeat -29157 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-52 chr3 126923770 126923978 + 1.16633110333236 NA 3' UTR (NM_001327939, exon 46 of 46) 3' UTR (NM_001327939, exon 46 of 46) 19512 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-14 chr15 75221004 75221278 + 1.16633110333236 NA Intergenic Intergenic -47280 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-27 chr6 31074555 31074783 + 1.16633110333236 NA Intergenic Intergenic -11576 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-25 chr13 5869978 5870176 + 1.16633110333236 NA 3' UTR (NM_011803, exon 4 of 4) 3' UTR (NM_011803, exon 4 of 4) 8588 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-38 chr18 36392104 36392389 + 1.16633110333236 NA intron (NM_001081365, intron 2 of 2) intron (NM_001081365, intron 2 of 2) 43622 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236 chr1 36063095 36063373 + 1.16633110333236 NA Intergenic Intergenic -5166 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-8 chr1 182369886 182370169 + 1.16633110333236 NA Intergenic Intergenic -28421 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236 chr11 31156724 31156954 + 1.16633110333236 NA Intergenic B1_Mm|SINE|Alu -170474 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-47 chr3 58678340 58678610 + 1.16633110333236 NA intron (NM_009174, intron 1 of 1) intron (NM_009174, intron 1 of 1) 13913 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-31 chr15 75456856 75457107 + 1.16633110333236 NA Intergenic Intergenic 7529 NM_001347049 102637705 NM_001347049 ENSMUSG00000093626 Ly6l Gm20654 lymphocyte antigen 6 complex, locus L protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-32 chr6 145767069 145767507 + 1.16633110333236 NA Intergenic Intergenic -41095 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-15 chr15 89374832 89375128 + 1.16633110333236 NA intron (NM_138302, intron 5 of 10) intron (NM_138302, intron 5 of 10) -1162 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-25 chr4 132352000 132352321 + 1.16633110333236 NA non-coding (NR_003270, exon 3 of 3) non-coding (NR_003270, exon 3 of 3) 1526 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-54 chr4 34225466 34225824 + 1.16633110333236 NA Intergenic Intergenic -175578 NM_026293 67652 Mm.55848 NM_026293 ENSMUSG00000028264 Spaca1 1700124L11Rik|4930540L03Rik sperm acrosome associated 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-28 chr13 28417343 28417669 + 1.16633110333236 NA Intergenic Intergenic 275022 NM_023746 28078 Mm.155058 NM_023746 ENSMUSG00000017064 Prl5a1 1600013P04Rik|D13Wsu14e|Ghd24|PLP-L|Prlpl prolactin family 5, subfamily a, member 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-48 chr3 79926093 79926298 + 1.16633110333236 NA intron (NM_133187, intron 2 of 3) intron (NM_133187, intron 2 of 3) 40265 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-11 chr10 59895074 59895404 + 1.16633110333236 NA intron (NM_019965, intron 6 of 8) intron (NM_019965, intron 6 of 8) 15648 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-21 chr2 84639882 84640174 + 1.16633110333236 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 9452 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-36 chr9 43232272 43232484 + 1.16633110333236 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 7438 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-10 chr10 7188774 7189101 + 1.16633110333236 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 23300 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-74 chr9 37207595 37207958 + 1.16633110333236 NA promoter-TSS (NM_025464) promoter-TSS (NM_025464) -447 NM_025464 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-12 chr14 43320108 43320333 + 1.16633110333236 NA Intergenic Intergenic 27591 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-21 chr12 86816365 86816638 + 1.16633110333236 NA Intergenic Intergenic 68313 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-39 chr18 39320297 39320693 + 1.16633110333236 NA intron (NM_001361073, intron 20 of 21) intron (NM_001361073, intron 20 of 21) 166750 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-10 chr13 67306271 67306635 + 1.16633110333236 NA promoter-TSS (NM_001003666) promoter-TSS (NM_001003666) -41 NM_001003666 431706 Mm.439456 NM_001003666 ENSMUSG00000055341 Zfp457 Rslcan-6 zinc finger protein 457 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-55 chr5 3301395 3301677 + 1.16633110333236 NA Intergenic Intergenic -42357 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-4 chr1 74055874 74056197 + 1.16633110333236 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 68412 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-50 chr3 81369111 81369465 + 1.16633110333236 NA Intergenic Intergenic 332872 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-6 chr1 177702634 177702856 + 1.16633110333236 NA Intergenic Intergenic -27069 NM_027077 69428 Mm.84467 NM_027077 ENSMUSG00000015962 1700016C15Rik - RIKEN cDNA 1700016C15 gene protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-27 chr13 23661293 23661579 + 1.16633110333236 NA Intergenic Intergenic 22523 NM_178189 319164 Mm.261973 NM_178189 ENSMUSG00000069270 Hist1h2ac - histone cluster 1, H2ac protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-59 chr5 92137272 92137540 + 1.16633110333236 NA promoter-TSS (NM_019490) promoter-TSS (NM_019490) 319 NM_001359197 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-69 chr7 51246068 51246281 + 1.16633110333236 NA Intergenic Intergenic -264855 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-33 chr16 95814305 95814569 + 1.16633110333236 NA Intergenic Intergenic 84276 NR_040485 69776 Mm.120470 NR_040484 ENSMUSG00000086899 1600002D24Rik - RIKEN cDNA 1600002D24 gene ncRNA unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-11 chr13 93999532 93999980 + 1.16633110333236 NA Intergenic Intergenic -58040 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-5 chr1 153638911 153639240 + 1.16633110333236 NA Intergenic Intergenic -13962 NM_026380 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-80 chrX 103493007 103493244 + 1.16633110333236 NA promoter-TSS (NR_015508) promoter-TSS (NR_015508) -433 NR_015508 70252 Mm.380486 NR_015508 ENSMUSG00000097571 Jpx 2010000I03Rik|2510040I06Rik|Enox Jpx transcript, Xist activator (non-protein coding) ncRNA common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-4 chr19 32187601 32187886 + 1.16633110333236 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 23270 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-17 chr11 96306295 96306567 + 1.16633110333236 NA TTS (NM_008268) TTS (NM_008268) 479 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-34 chr7 68140965 68141252 + 1.16633110333236 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 123125 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-26 chr13 13392237 13392450 + 1.16633110333236 NA intron (NM_031999, intron 1 of 6) intron (NM_031999, intron 1 of 6) 1281 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-46 chr3 57563261 57563634 + 1.16633110333236 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 12429 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236 chr1 12291158 12291523 + 1.16633110333236 NA Intergenic Intergenic -134646 NR_105759 102465961 NR_105759 ENSMUSG00000098555 Mir6341 Gm27262|mmu-mir-6341 microRNA 6341 ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-71 chr7 112765190 112765473 + 1.16633110333236 NA intron (NM_001166584, intron 2 of 13) intron (NM_001166584, intron 2 of 13) 5947 NM_001166585 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-23 chr4 58164736 58165125 + 1.16633110333236 NA intron (NM_022814, intron 3 of 47) intron (NM_022814, intron 3 of 47) 41666 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-9 chr8 9960759 9960959 + 1.16633110333236 NA Intergenic MTE2b|LTR|ERVL-MaLR 15464 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-28 chr6 31148907 31149139 + 1.16633110333236 NA intron (NR_110471, intron 2 of 3) intron (NR_110471, intron 2 of 3) 69451 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-3 chr1 64797068 64797330 + 1.16633110333236 NA intron (NM_001039493, intron 7 of 7) MIR3|SINE|MIR -59449 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-17 chr17 47595415 47595688 + 1.16633110333236 NA intron (NM_001081635, intron 4 of 6) intron (NM_001081635, intron 4 of 6) 2084 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-40 chr9 114857354 114857645 + 1.16633110333236 NA Intergenic Intergenic -13347 NM_027294 70031 Mm.150064 NM_027294 ENSMUSG00000041012 Cmtm8 2700018N07Rik|AA408515|Cklfsf8 CKLF-like MARVEL transmembrane domain containing 8 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-76 chr9 99137285 99137544 + 1.16633110333236 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 2797 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-26 chr4 138021480 138021722 + 1.16633110333236 NA intron (NM_001355699, intron 1 of 32) intron (NM_001355699, intron 1 of 32) 23776 NM_001355700 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-45 chr2 130291354 130291576 + 1.16633110333236 NA Intergenic Intergenic -4474 NM_001110513 228598 Mm.32582 NM_152993 ENSMUSG00000053552 Ebf4 Ebf3|O/E-4|Olf-1 early B cell factor 4 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-38 chr9 45937589 45937874 + 1.16633110333236 NA TTS (NM_172257) TTS (NM_172257) -1673 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-15 chr11 33271580 33272012 + 1.16633110333236 NA intron (NR_110973, intron 23 of 28) intron (NR_110973, intron 23 of 28) -68208 NM_019916 27140 Mm.25362 NM_019916 ENSMUSG00000040610 Tlx3 Hox11l2|Rnx|Tlx1l2 T cell leukemia, homeobox 3 protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-5 chr3 39059823 39060061 + 1.16633110333236 NA Intergenic Intergenic 173002 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-30 chr15 66901346 66901562 + 1.16633110333236 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 10061 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-61 chr6 7675732 7676107 + 1.16633110333236 NA intron (NM_012055, intron 11 of 11) intron (NM_012055, intron 11 of 11) 17263 NM_012055 27053 Mm.2942 NM_012055 ENSMUSG00000029752 Asns - asparagine synthetase protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-24 chr4 109460816 109461028 + 1.16633110333236 NA intron (NM_013876, intron 1 of 2) intron (NM_013876, intron 1 of 2) 15583 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-29 chr14 31779441 31779709 + 1.16633110333236 NA intron (NM_001024604, intron 1 of 27) intron (NM_001024604, intron 1 of 27) 50840 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-73 chr8 123715676 123715997 + 1.16633110333236 NA Intergenic Intergenic -18122 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-6 chr1 131279119 131279409 + 1.16633110333236 NA intron (NM_019777, intron 1 of 21) intron (NM_019777, intron 1 of 21) 299 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-E|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-2 chr12 85958210 85958425 + 1.16633110333236 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 120724 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-62 chr6 34706695 34706949 + 1.16633110333236 NA intron (NM_001347100, intron 3 of 13) intron (NM_001347100, intron 3 of 13) -2622 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-72 chr7 118364546 118364757 + 1.16633110333236 NA Intergenic Intergenic 78909 NM_001362180 110058 Mm.156558 NM_138649 ENSMUSG00000058420 Syt17 Bk|sytXVII synaptotagmin XVII protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-8 chr5 113773237 113773478 + 1.16633110333236 NA promoter-TSS (NM_016926) promoter-TSS (NM_016926) 545 NM_025526 66383 Mm.29497 NM_025526 ENSMUSG00000025825 Iscu 2310020H20Rik|AA407971|Nifu|Nifun iron-sulfur cluster assembly enzyme protein-coding common_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236 chr10 86114623 86114924 + 1.16633110333236 NA intron (NM_013722, intron 7 of 13) intron (NM_013722, intron 7 of 13) 18919 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-6 chr3 88627739 88627928 + 1.16633110333236 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 6439 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-5 chr1 93161213 93161530 + 1.16633110333236 NA promoter-TSS (NM_001159940) promoter-TSS (NM_001159940) -423 NM_172411 71874 Mm.158766 NM_172411 ENSMUSG00000034159 2310007B03Rik - RIKEN cDNA 2310007B03 gene protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-78 chr9 106171744 106171960 + 1.16633110333236 NA intron (NM_029896, intron 1 of 8) intron (NM_029896, intron 1 of 8) 923 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-67 chr7 16027434 16027626 + 1.16633110333236 NA Intergenic Intergenic -28035 NM_001081418 243842 Mm.440249 NM_001081418 ENSMUSG00000070808 Bicra Gltscr1 BRD4 interacting chromatin remodeling complex associated protein protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-37 chr9 45932462 45932687 + 1.16633110333236 NA intron (NM_011526, intron 1 of 4) intron (NM_011526, intron 1 of 4) 3484 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-58 chr5 77391286 77391688 + 1.16633110333236 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 16558 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-44 chr2 24436164 24436462 + 1.16633110333236 NA intron (NM_011040, intron 8 of 11) intron (NM_011040, intron 8 of 11) 39286 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-3 chr1 88668357 88668626 + 1.16633110333236 NA Intergenic Intergenic 33700 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-7 chr11 4837861 4838309 + 1.16633110333236 NA intron (NM_010898, intron 1 of 15) intron (NM_010898, intron 1 of 15) -4950 NM_001252253 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-34 chr17 5206175 5206520 + 1.16633110333236 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 211273 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-3 chr17 26620882 26621131 + 1.16633110333236 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) -55390 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-68 chr7 16340847 16341044 + 1.16633110333236 NA intron (NM_019748, intron 6 of 8) intron (NM_019748, intron 6 of 8) 31362 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-4 chr1 93161641 93161952 + 1.16633110333236 NA promoter-TSS (NM_001159940) promoter-TSS (NM_001159940) -848 NM_172411 71874 Mm.158766 NM_172411 ENSMUSG00000034159 2310007B03Rik - RIKEN cDNA 2310007B03 gene protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-18 chr11 102643140 102643461 + 1.16633110333236 NA Intergenic B2_Mm2|SINE|B2 -18884 NR_033474 77132 Mm.194729 NR_033474 2810433D01Rik - RIKEN cDNA 2810433D01 gene ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-53 chr3 136790389 136790702 + 1.16633110333236 NA intron (NM_008913, intron 1 of 13) intron (NM_008913, intron 1 of 13) 120479 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-2 chr1 87621112 87621331 + 1.16633110333236 NA intron (NM_001110192, intron 1 of 26) intron (NM_001110192, intron 1 of 26) 909 NM_010566 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-7 chr5 29875372 29875611 + 1.16633110333236 NA Intergenic Intergenic -137623 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-63 chr6 70879816 70880140 + 1.16633110333236 NA intron (NM_010121, intron 4 of 16) intron (NM_010121, intron 4 of 16) 35463 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-32 chr16 25040931 25041286 + 1.16633110333236 NA Intergenic Intergenic -18531 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-79 chrX 73480017 73480433 + 1.16633110333236 NA Intergenic Intergenic -3376 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-31 chr6 117271545 117271942 + 1.16633110333236 NA Intergenic Intergenic 103208 NM_021704 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-36 chr17 79454472 79454733 + 1.16633110333236 NA Intergenic Intergenic 23283 NR_033463 74622 Mm.311921 NR_033463 4930429F11Rik - RIKEN cDNA 4930429F11 gene ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-40 chr18 40140673 40140870 + 1.16633110333236 NA Intergenic Intergenic 78628 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-35 chr7 141393175 141393538 + 1.16633110333236 NA intron (NM_011528, intron 1 of 7) B1_Mur1|SINE|Alu 1196 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-14 chr11 30266216 30266480 + 1.16633110333236 NA Intergenic Intergenic -46576 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-64 chr6 94604626 94604887 + 1.16633110333236 NA TTS (NM_026255) TTS (NM_026255) 1659 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-43 chr19 59337524 59337787 + 1.16633110333236 NA intron (NM_001033222, intron 1 of 4) intron (NM_001033222, intron 1 of 4) 8125 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-24 chr12 117728538 117728793 + 1.16633110333236 NA exon (NM_175930, exon 21 of 28) exon (NM_175930, exon 21 of 28) -115196 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-35 chr17 32536750 32537018 + 1.16633110333236 NA intron (NM_024442, intron 1 of 12) CT-rich|Low_complexity|Low_complexity 327 NM_001356303 70101 Mm.30504 NM_024442 ENSMUSG00000048440 Cyp4f16 2310021J05Rik|AI746515 cytochrome P450, family 4, subfamily f, polypeptide 16 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-70 chr7 89675981 89676188 + 1.16633110333236 NA intron (NM_181407, intron 1 of 13) GA-rich|Low_complexity|Low_complexity 43266 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-16 chr15 99888470 99888724 + 1.16633110333236 NA Intergenic Intergenic -13141 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-9 chr1 192091569 192091887 + 1.16633110333236 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 871 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-22 chr3 108385023 108385247 + 1.16633110333236 NA exon (NM_001190161, exon 4 of 8) exon (NM_001190161, exon 4 of 8) 1297 NM_019976 56742 Mm.389499 NM_019976 ENSMUSG00000068744 Psrc1 5430413I02Rik|AL033312|Dda3 proline/serine-rich coiled-coil 1 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-20 chr2 3714369 3714586 + 1.16633110333236 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 1019 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-13 chr10 82863144 82863376 + 1.16633110333236 NA intron (NM_001042513, intron 2 of 14) intron (NM_001042513, intron 2 of 14) 2919 NM_001042514 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-23 chr12 105684028 105684277 + 1.16633110333236 NA intron (NM_029654, intron 1 of 41) intron (NM_029654, intron 1 of 41) 1089 NM_029654 76559 Mm.114362 NM_029654 ENSMUSG00000041341 Atg2b 2410024A21Rik|AI047755|AI503411|AW558123|C030004M05Rik|C630028L02Rik|mKIAA4067 autophagy related 2B protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-42 chr19 46573677 46573966 + 1.16633110333236 NA promoter-TSS (NM_019718) promoter-TSS (NM_019718) 456 NM_053196 94279 Mm.296837 NM_053196 ENSMUSG00000025036 Sfxn2 C79732|F630107H02Rik sideroflexin 2 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-41 chrX 52248161 52248390 + 1.16633110333236 NA Intergenic Intergenic -83352 NM_008150 14735 Mm.1528 NM_008150 ENSMUSG00000031119 Gpc4 9530073D23Rik|AF311610|AI385680|AI661372|K-glypican glypican 4 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-30 chr6 82129442 82129902 + 1.16633110333236 NA Intergenic Intergenic 88044 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-60 chr5 113208607 113209011 + 1.16633110333236 NA Intergenic Intergenic -18100 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-9 chr11 59425206 59425498 + 1.16633110333236 NA intron (NM_144521, intron 3 of 4) intron (NM_144521, intron 3 of 4) 24682 NM_001356454 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-13 chr14 73878284 73878523 + 1.16633110333236 NA Intergenic Intergenic 325617 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-75 chr9 67831991 67832268 + 1.16633110333236 NA intron (NM_001163143, intron 1 of 1) intron (NM_001163143, intron 1 of 1) 201 NM_001163143 244911 Mm.325849 NM_001163143 ENSMUSG00000047990 C2cd4a EG244911|Fam148a C2 calcium-dependent domain containing 4A protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-39 chr9 70270825 70271061 + 1.16633110333236 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 63593 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-18 chr17 56024042 56024271 + 1.16633110333236 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 12481 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-20 chr11 104626133 104626460 + 1.16633110333236 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 18296 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-51 chr3 95738027 95738253 + 1.16633110333236 NA intron (NM_007899, intron 2 of 10) intron (NM_007899, intron 2 of 10) 1429 NM_007899 13601 Mm.3433 NM_007899 ENSMUSG00000028108 Ecm1 AI663821|p85 extracellular matrix protein 1 protein-coding common_peak2_6_15_-1.45419094706159_3.27290452646921_1.16633110333236-2 chr4 123803032 123803248 + 1.16633110333236 NA intron (NM_183163, intron 1 of 7) PB1D10|SINE|Alu -10491 NM_001356445 230726 Mm.37334 NM_183163 ENSMUSG00000043333 Rhbdl2 9130416B15|RRP2 rhomboid like 2 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-56 chr5 36620421 36620621 + 1.16633110333236 NA intron (NM_001081232, intron 3 of 8) intron (NM_001081232, intron 3 of 8) -34295 NM_001113362 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-65 chr6 97298582 97298814 + 1.16633110333236 NA intron (NM_145148, intron 20 of 23) intron (NM_145148, intron 20 of 23) -45918 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_17_6_1.09141130618834_3.35306057515178_1.16633110333236-41 chr18 56399710 56399922 + 1.16633110333236 NA promoter-TSS (NM_001360917) promoter-TSS (NM_001360917) -524 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding common_peak2_38_50_-0.666051565288926_5.33939955932703_1.16605326768361 chr1 170188894 170189557 + 1.16605326768361 NA Intergenic Intergenic -14261 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak2_38_50_-0.666051565288926_5.33939955932703_1.16605326768361-2 chr11 51619803 51620543 + 1.16605326768361 NA intron (NM_026631, intron 2 of 3) ID4_|SINE|ID 400 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding unique_peak2_38_50_-0.666051565288926_5.33939955932703_1.16605326768361 chr1 93668342 93669281 + 1.16605326768361 NA Intergenic Intergenic -16764 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak2_38_50_-0.666051565288926_5.33939955932703_1.16605326768361-3 chr6 146905746 146906731 + 1.16605326768361 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 17744 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_38_50_-0.666051565288926_5.33939955932703_1.16605326768361 chr1 9636335 9637039 + 1.16605326768361 NA Intergenic Intergenic -5595 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA common_peak1_38_50_-0.666051565288926_5.33939955932703_1.16605326768361-2 chr10 17568075 17568761 + 1.16605326768361 NA Intergenic (CCA)n|Simple_repeat|Simple_repeat -154810 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_60_32_0.602761949944423_5.34577509433066_1.1660532676836-2 chr8 123331761 123332428 + 1.1660532676836 NA promoter-TSS (NM_172287) promoter-TSS (NM_172287) -619 NM_172287 234857 Mm.150200 NM_172287 ENSMUSG00000010154 Spire2 BC026502|Spir-2|Spir2 spire type actin nucleation factor 2 protein-coding common_peak1_60_32_0.602761949944423_5.34577509433066_1.1660532676836-2 chr19 42045620 42046183 + 1.1660532676836 NA promoter-TSS (NM_026152) promoter-TSS (NM_026152) 50 NM_026152 67432 Mm.24196 NM_026152 ENSMUSG00000025176 Hoga1 0610010D20Rik|Dhdpsl|Npl2 4-hydroxy-2-oxoglutarate aldolase 1 protein-coding common_peak1_60_32_0.602761949944423_5.34577509433066_1.1660532676836 chr17 75472135 75472972 + 1.1660532676836 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 7015 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_60_32_0.602761949944423_5.34577509433066_1.1660532676836 chr10 96616252 96616777 + 1.1660532676836 NA promoter-TSS (NM_007569) promoter-TSS (NM_007569) -487 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_60_32_0.602761949944423_5.34577509433066_1.1660532676836 chr14 57317542 57318060 + 1.1660532676836 NA intron (NM_030004, intron 3 of 7) intron (NM_030004, intron 3 of 7) 80682 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_103_113_-0.421461798856117_6.62215911473668_1.16373426469041 chr15 62039124 62040153 + 1.16373426469041 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 381 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586-3 chr4 139596047 139596592 + 1.1637339601586 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 21599 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_38_18_0.758446263238984_4.62715064506308_1.1637339601586-3 chr8 64614138 64614545 + 1.1637339601586 NA intron (NM_013494, intron 3 of 8) intron (NM_013494, intron 3 of 8) 78768 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586-5 chr6 108117429 108117833 + 1.1637339601586 NA intron (NM_145937, intron 8 of 8) intron (NM_145937, intron 8 of 8) 52586 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding common_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586 chr11 40694679 40695081 + 1.1637339601586 NA 5' UTR (NM_001199274, exon 1 of 7) 5' UTR (NM_001199274, exon 1 of 7) 323 NM_001199274 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586-4 chr2 67674991 67675522 + 1.1637339601586 NA promoter-TSS (NR_106083) promoter-TSS (NR_106083) -201 NR_106083 102465706 NR_106083 ENSMUSG00000098299 Mir7224 Gm27971|mmu-mir-7224 microRNA 7224 ncRNA unique_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586 chr14 31165705 31166506 + 1.1637339601586 NA intron (NM_138672, intron 1 of 68) intron (NM_138672, intron 1 of 68) 2536 NM_138672 192187 Mm.220821 NM_138672 ENSMUSG00000042286 Stab1 FEEL-1|FELE-1|MFEEL-1|MS-1|STAB-1|mKIAA0246 stabilin 1 protein-coding unique_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-3 chr13 55481898 55482608 + 1.1637339601586 NA exon (NM_019813, exon 5 of 14) exon (NM_019813, exon 5 of 14) -4477 NR_105909 102465569 NR_105909 ENSMUSG00000098341 Mir6944 Gm27710|mmu-mir-6944 microRNA 6944 ncRNA common_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-3 chr17 45691894 45692406 + 1.1637339601586 NA intron (NM_026732, intron 1 of 2) intron (NM_026732, intron 1 of 2) 5801 NM_026732 68463 Mm.379158 NM_026732 ENSMUSG00000023939 Mrpl14 1110006I11Rik|AI846816|MRP-L32|Rpml32 mitochondrial ribosomal protein L14 protein-coding unique_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-2 chr11 72120854 72121306 + 1.1637339601586 NA intron (NM_001024927, intron 1 of 19) intron (NM_001024927, intron 1 of 19) 14809 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak1_21_32_-0.858163737188149_4.61531225076438_1.1637339601586 chr9 31321835 31322191 + 1.1637339601586 NA intron (NM_001080817, intron 3 of 20) intron (NM_001080817, intron 3 of 20) 6906 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding unique_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586-2 chr17 12293268 12293776 + 1.1637339601586 NA intron (NM_001357722, intron 1 of 25) intron (NM_001357722, intron 1 of 25) 25138 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-5 chr8 104250955 104251390 + 1.1637339601586 NA intron (NM_001037841, intron 1 of 2) CpG 311 NM_001286383 75458 Mm.269219 NM_029295 ENSMUSG00000054400 Cklf 1700001C14Rik|1810018M11Rik|A730028G07Rik|C32|CKLF1|CKLF3|CKLF4|CKLF5|Cklf2|Cklf6|HSPC224|UCK-1 chemokine-like factor protein-coding common_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-4 chr9 57642676 57643239 + 1.1637339601586 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 2696 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding unique_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-4 chr5 115509461 115510173 + 1.1637339601586 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 3141 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586-3 chr18 36417595 36418084 + 1.1637339601586 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 36656 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_38_18_0.758446263238984_4.62715064506308_1.1637339601586-4 chr8 83652793 83653162 + 1.1637339601586 NA intron (NM_018771, intron 1 of 6) intron (NM_018771, intron 1 of 6) 299 NM_018771 67903 Mm.20945 NM_018771 ENSMUSG00000019433 Gipc1 GIPC|Glut1CIP|Rgs19ip1|Semcap1|TIP-2|TaxIP2 GIPC PDZ domain containing family, member 1 protein-coding common_peak2_38_18_0.758446263238984_4.62715064506308_1.1637339601586-2 chr5 112321098 112321435 + 1.1637339601586 NA Intergenic Intergenic -5103 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak2_38_18_0.758446263238984_4.62715064506308_1.1637339601586 chr3 20154549 20154915 + 1.1637339601586 NA intron (NM_001355261, intron 1 of 7) CpG 384 NM_001355261 27357 Mm.6375 NM_013755 ENSMUSG00000019528 Gyg AU017667|GN1|Gyg1 glycogenin protein-coding unique_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586 chr11 69838503 69838971 + 1.1637339601586 NA intron (NM_026982, intron 1 of 3) intron (NM_026982, intron 1 of 3) 212 NM_026982 69186 Mm.248772 NM_026982 ENSMUSG00000070394 Tmem256 1810027O10Rik|3110009M16Rik transmembrane protein 256 protein-coding common_peak1_38_18_0.758446263238984_4.62715064506308_1.1637339601586-2 chr15 59760802 59761170 + 1.1637339601586 NA Intergenic Intergenic 33973 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586 chr11 103313366 103314089 + 1.1637339601586 NA Intergenic PB1D9|SINE|Alu 30975 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_21_32_-0.858163737188149_4.61531225076438_1.1637339601586-2 chr13 28738144 28738740 + 1.1637339601586 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -27569 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_341_233_0.246359980270162_7.99354470971849_1.16266067540765 chr6 52216036 52219689 + 1.16266067540765 NA 5' UTR (NM_010455, exon 1 of 2) 5' UTR (NM_010455, exon 1 of 2) 711 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak1_199_129_0.325821089977365_7.18527835801714_1.1626482530566 chr9 32696079 32698189 + 1.1626482530566 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 1092 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_103_61_0.457231904921749_6.18281226284775_1.1616210394491 chr11 59662578 59663146 + 1.1616210394491 NA exon (NM_012027, exon 1 of 24) exon (NM_012027, exon 1 of 24) 367 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak1_73_85_-0.5023589932179_6.17508525809315_1.16162103944909 chr4 88721692 88722451 + 1.16162103944909 NA 5' UTR (NM_172871, exon 1 of 1) 5' UTR (NM_172871, exon 1 of 1) 437 NM_172871 242521 Mm.260601 NM_172871 ENSMUSG00000070923 Klhl9 8030469P05|C530050O22Rik|mKIAA1354 kelch-like 9 protein-coding common_peak2_73_85_-0.5023589932179_6.17508525809315_1.16162103944909 chr4 156189278 156190074 + 1.16162103944909 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 7812 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_96_106_-0.429856431990069_6.52653877040611_1.15977136895349 chr11 98775633 98777049 + 1.15977136895349 NA promoter-TSS (NM_145434) promoter-TSS (NM_145434) -964 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak1_96_106_-0.429856431990069_6.52653877040611_1.15977136895349-2 chr16 23436255 23437140 + 1.15977136895349 NA Intergenic Intergenic 7564 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_138_146_-0.372695293453278_7.01332469810973_1.15842839277208 chr1 167268264 167269976 + 1.15842839277208 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 16007 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_139_146_-0.362426311437049_7.01845918911784_1.15842839277208 chr13 95546103 95547383 + 1.15842839277208 NA Intergenic Intergenic -21503 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_212_138_0.319460291637435_7.27867121854223_1.15816742446795 chr3 152210485 152211685 + 1.15816742446795 NA intron (NM_001355374, intron 1 of 19) CpG 663 NM_001355374 51886 Mm.278922 NM_057172 ENSMUSG00000028034 Fubp1 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4 far upstream element (FUSE) binding protein 1 protein-coding common_peak2_212_138_0.319460291637435_7.27867121854223_1.15816742446795 chr4 89457973 89460269 + 1.15816742446795 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -148089 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_212_138_0.319460291637435_7.27867121854223_1.15816742446795-2 chr4 127353158 127354805 + 1.15816742446795 NA promoter-TSS (NM_008127) promoter-TSS (NM_008127) 100 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak2_81_92_-0.468199243507593_6.30505918935423_1.15814843603168 chr10 19080904 19082139 + 1.15814843603168 NA Intergenic Intergenic -60228 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_112_67_0.442859860409913_6.3088927714553_1.15814843603165 chr4 141244046 141245458 + 1.15814843603165 NA intron (NM_172520, intron 1 of 16) intron (NM_172520, intron 1 of 16) 1868 NM_172520 213649 Mm.134460 NM_172520 ENSMUSG00000028919 Arhgef19 6030432F23|6430573B13Rik|WGEF Rho guanine nucleotide exchange factor (GEF) 19 protein-coding common_peak2_111_67_0.430126293395097_6.30252598794789_1.15814843603165 chr11 76762693 76763561 + 1.15814843603165 NA intron (NM_001356321, intron 1 of 8) intron (NM_001356321, intron 1 of 8) 451 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak1_111_67_0.430126293395097_6.30252598794789_1.15814843603165-2 chr2 144165437 144166640 + 1.15814843603165 NA Intergenic Intergenic 23252 NR_136884 433481 Mm.330630 NR_136884 ENSMUSG00000074758 Gm5535 EG433481 predicted gene 5535 ncRNA common_peak1_111_67_0.430126293395097_6.30252598794789_1.15814843603165-3 chr8 70760294 70760924 + 1.15814843603165 NA intron (NM_183170, intron 1 of 4) intron (NM_183170, intron 1 of 4) 312 NM_183170 234384 Mm.213010 NM_183170 ENSMUSG00000035559 Mpv17l2 Fksg24 MPV17 mitochondrial membrane protein-like 2 protein-coding common_peak1_111_67_0.430126293395097_6.30252598794789_1.15814843603165 chr13 49300368 49301699 + 1.15814843603165 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 8175 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_73_41_0.531588338705437_5.65811159213148_1.15813009484044-2 chr19 57007763 57008436 + 1.15813009484044 NA intron (NM_001177796, intron 1 of 19) CpG 476 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_73_41_0.531588338705437_5.65811159213148_1.15813009484044-3 chr5 105876803 105877392 + 1.15813009484044 NA intron (NR_030777, intron 1 of 9) CpG 529 NM_018759 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_73_41_0.531588338705437_5.65811159213148_1.15813009484044 chr1 137898795 137899783 + 1.15813009484044 NA Intergenic Intergenic -67166 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak2_73_41_0.531588338705437_5.65811159213148_1.15813009484044-4 chr7 38183196 38184068 + 1.15813009484044 NA promoter-TSS (NM_028166) promoter-TSS (NM_028166) -155 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak1_73_41_0.531588338705437_5.65811159213148_1.15813009484044 chr1 9747594 9748398 + 1.15813009484044 NA non-coding (NR_040462, exon 1 of 4) non-coding (NR_040462, exon 1 of 4) 348 NR_040462 73331 Mm.460470 NR_040462 1700034P13Rik - RIKEN cDNA 1700034P13 gene ncRNA common_peak1_49_61_-0.591897448234566_5.65824758626959_1.15813009484044 chr1 191182617 191183205 + 1.15813009484044 NA intron (NM_007498, intron 1 of 3) CpG 422 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak2_49_61_-0.591897448234566_5.65824758626959_1.15813009484044-2 chr5 22549773 22550846 + 1.15813009484044 NA promoter-TSS (NR_102315) promoter-TSS (NR_102315) 22 NM_011959 26429 Mm.412217 NM_011959 ENSMUSG00000029012 Orc5 AL033327|MmORC5|Orc5l origin recognition complex, subunit 5 protein-coding common_peak2_73_41_0.531588338705437_5.65811159213148_1.15813009484044-2 chr11 76059353 76060048 + 1.15813009484044 NA intron (NM_026664, intron 19 of 21) intron (NM_026664, intron 19 of 21) -31918 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding common_peak2_49_61_-0.591897448234566_5.65824758626959_1.15813009484044 chr1 182092003 182092763 + 1.15813009484044 NA Intergenic Intergenic -32354 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak1_73_41_0.531588338705437_5.65811159213148_1.15813009484044-3 chr2 173276688 173277115 + 1.15813009484044 NA promoter-TSS (NM_022995) promoter-TSS (NM_022995) -368 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-16 chr15 55090619 55090872 + 1.15812782348128 NA promoter-TSS (NM_001355594) promoter-TSS (NM_001355594) -254 NM_001355594 72107 Mm.486550 NM_183089 ENSMUSG00000022422 Dscc1 2010006I05Rik|2600005O03Rik|Dcc1 DNA replication and sister chromatid cohesion 1 protein-coding common_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-2 chr3 95668879 95669143 + 1.15812782348128 NA Intergenic B1F|SINE|Alu 10290 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-3 chr13 97357309 97357704 + 1.15812782348128 NA Intergenic Intergenic -77464 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-6 chr10 84711505 84711912 + 1.15812782348128 NA intron (NM_027423, intron 23 of 27) intron (NM_027423, intron 23 of 27) -44340 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-21 chr18 53524512 53524772 + 1.15812782348128 NA intron (NM_001033281, intron 2 of 6) intron (NM_001033281, intron 2 of 6) 60096 NM_001033281 225518 Mm.297645 NM_001033281 ENSMUSG00000069378 Prdm6 Gm92|PRISM PR domain containing 6 protein-coding common_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-3 chr5 30648011 30648280 + 1.15812782348128 NA TTS (NR_049199) TTS (NR_049199) 206 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-5 chr10 68088055 68088374 + 1.15812782348128 NA Intergenic Intergenic 108644 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-8 chr17 26650196 26650507 + 1.15812782348128 NA intron (NM_026170, intron 9 of 9) intron (NM_026170, intron 9 of 9) -26045 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-34 chr8 72991654 72992208 + 1.15812782348128 NA intron (NM_001317391, intron 7 of 15) intron (NM_001317391, intron 7 of 15) -24581 NR_039551 100628574 NR_039551 ENSMUSG00000093140 Mir28b mmu-mir-28b microRNA 28b ncRNA unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128 chr11 16759149 16759573 + 1.15812782348128 NA intron (NM_207655, intron 1 of 27) RSINE1|SINE|B4 7158 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-18 chr16 76525540 76525912 + 1.15812782348128 NA Intergenic Intergenic -23069 NR_155449 102632730 NR_155449 Gm30726 - predicted gene, 30726 ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-39 chrX 74254066 74254401 + 1.15812782348128 NA promoter-TSS (NM_007927) promoter-TSS (NM_007927) -454 NM_007927 13726 Mm.18892 NM_007927 ENSMUSG00000001964 Emd AW550900|Sta emerin protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-15 chr8 110702486 110702724 + 1.15812782348128 NA intron (NR_151675, intron 13 of 17) intron (NR_151675, intron 13 of 17) -18871 NM_198625 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-30 chr6 94101689 94102221 + 1.15812782348128 NA intron (NM_001029850, intron 1 of 23) intron (NM_001029850, intron 1 of 23) 135487 NR_130996 78178 Mm.452749 NR_130996 ENSMUSG00000045095 4930511A08Rik - RIKEN cDNA 4930511A08 gene ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-11 chr12 110850829 110851244 + 1.15812782348128 NA intron (NM_028365, intron 1 of 7) intron (NM_028365, intron 1 of 7) 757 NM_028365 72805 Mm.443524 NM_028365 ENSMUSG00000021271 Zfp839 2810455K09Rik zinc finger protein 839 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-6 chr15 80799384 80799781 + 1.15812782348128 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 972 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-33 chr7 144750780 144751213 + 1.15812782348128 NA Intergenic Intergenic -12404 NM_001242349 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding common_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-2 chr13 21810450 21810760 + 1.15812782348128 NA promoter-TSS (NM_001097979) promoter-TSS (NM_001097979) 138 NM_178185 319171 Mm.250564 NM_178185 ENSMUSG00000094777 Hist1h2ap Gm11276 histone cluster 1, H2ap protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-14 chr14 69681784 69682242 + 1.15812782348128 NA intron (NM_033325, intron 9 of 13) intron (NM_033325, intron 9 of 13) -10235 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-27 chr4 72198521 72198935 + 1.15812782348128 NA intron (NM_001285530, intron 2 of 17) intron (NM_001285530, intron 2 of 17) 2165 NM_011599 21885 Mm.278444 NM_011599 ENSMUSG00000008305 Tle1 C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l transducin-like enhancer of split 1 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-8 chr11 20453374 20453736 + 1.15812782348128 NA Intergenic Intergenic -89698 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-3 chr1 192661773 192662128 + 1.15812782348128 NA intron (NM_144881, intron 8 of 11) intron (NM_144881, intron 8 of 11) 109269 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-17 chr16 24140893 24141201 + 1.15812782348128 NA Intergenic Intergenic -58357 NR_155457 108168278 Mm.417246 NR_155457 Gm46545 - predicted gene, 46545 ncRNA unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-12 chr4 143279202 143279685 + 1.15812782348128 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 20121 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-4 chr13 100015953 100016167 + 1.15812782348128 NA promoter-TSS (NM_030026) promoter-TSS (NM_030026) -421 NM_030026 78038 Mm.137327 NM_030026 ENSMUSG00000021646 Mccc2 4930552N12Rik|MCCB methylcrotonoyl-Coenzyme A carboxylase 2 (beta) protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-32 chr7 29178769 29179074 + 1.15812782348128 NA exon (NM_026545, exon 3 of 7) exon (NM_026545, exon 3 of 7) 1752 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-10 chr3 132876069 132876401 + 1.15812782348128 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 2361 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-26 chr2 151893650 151894057 + 1.15812782348128 NA Intergenic Intergenic -17354 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-3 chr18 64482719 64483074 + 1.15812782348128 NA intron (NM_001348055, intron 1 of 9) intron (NM_001348055, intron 1 of 9) 6202 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding common_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-4 chr8 78738261 78738502 + 1.15812782348128 NA Intergenic Intergenic 82771 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-4 chr7 29237904 29238116 + 1.15812782348128 NA promoter-TSS (NM_001110201) promoter-TSS (NM_001110201) -313 NM_001110201 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-35 chr8 109764422 109764764 + 1.15812782348128 NA Intergenic Intergenic -13990 NM_009677 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-11 chr4 80940683 80941045 + 1.15812782348128 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 30178 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-31 chr6 124920453 124920801 + 1.15812782348128 NA intron (NR_152158, intron 1 of 1) intron (NR_152158, intron 1 of 1) -2681 NM_026988 69202 Mm.142187 NM_026988 ENSMUSG00000030122 Ptms 2610009E16Rik parathymosin protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-19 chr17 75273817 75274076 + 1.15812782348128 NA exon (NM_001331237, exon 7 of 30) exon (NM_001331237, exon 7 of 30) 95165 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-28 chr5 66166070 66166615 + 1.15812782348128 NA TTS (NR_040695) TTS (NR_040695) -14388 NM_001127382 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-12 chr13 42585443 42585857 + 1.15812782348128 NA Intergenic Intergenic -95149 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-38 chr9 41479771 41480009 + 1.15812782348128 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 4997 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-25 chr2 125293048 125293540 + 1.15812782348128 NA Intergenic Intergenic 45779 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-24 chr2 90541513 90541727 + 1.15812782348128 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 39027 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-7 chr10 121962020 121962280 + 1.15812782348128 NA intron (NM_001081037, intron 1 of 21) intron (NM_001081037, intron 1 of 21) 85165 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding common_peak1_9_18_-1.19117559089867_3.65233971799425_1.15812782348128 chr5 32133273 32133460 + 1.15812782348128 NA Intergenic CpG -3106 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-15 chr14 73239270 73239589 + 1.15812782348128 NA exon (NM_175116, exon 1 of 1) exon (NM_175116, exon 1 of 1) 1538 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-14 chr7 101905218 101905597 + 1.15812782348128 NA promoter-TSS (NM_025605) promoter-TSS (NM_025605) -430 NM_025605 66508 Mm.30003 NM_025605 ENSMUSG00000030842 Lamtor1 2400001E08Rik|Pdro|p18 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-20 chr18 52526802 52527199 + 1.15812782348128 NA exon (NM_010728, exon 3 of 7) exon (NM_010728, exon 3 of 7) 2721 NM_001286181 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-2 chr11 83936421 83936650 + 1.15812782348128 NA Intergenic Intergenic -5555 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-37 chr9 21791633 21791834 + 1.15812782348128 NA intron (NM_145611, intron 3 of 11) intron (NM_145611, intron 3 of 11) 6813 NM_145611 235041 Mm.257371 NM_145611 ENSMUSG00000032194 Kank2 AI504612|Ankrd25|BC010245 KN motif and ankyrin repeat domains 2 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-2 chr1 152607891 152608233 + 1.15812782348128 NA intron (NM_001346119, intron 2 of 17) intron (NM_001346119, intron 2 of 17) 17155 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-7 chr16 87707910 87708155 + 1.15812782348128 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 9078 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-5 chr13 114681569 114681919 + 1.15812782348128 NA intron (NR_045976, intron 3 of 6) intron (NR_045976, intron 3 of 6) 74516 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-4 chr10 19170789 19171133 + 1.15812782348128 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 3723 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-10 chr12 3371944 3372200 + 1.15812782348128 NA intron (NM_008445, intron 1 of 7) intron (NM_008445, intron 1 of 7) 6940 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128 chr1 107590132 107590609 + 1.15812782348128 NA intron (NM_001159748, intron 1 of 5) intron (NM_001159748, intron 1 of 5) 364 NM_001159748 20725 Mm.83909 NM_011459 ENSMUSG00000026315 Serpinb8 CAP-2|CAP2|NK10|Spi8|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 8 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-23 chr2 71594828 71595188 + 1.15812782348128 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -48254 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-13 chr5 76951781 76952025 + 1.15812782348128 NA promoter-TSS (NM_172146) promoter-TSS (NM_172146) -325 NM_172146 231327 Mm.202337 NM_172146 ENSMUSG00000029246 Ppat 5730454C12Rik|AA408689|AA675351|AI507113|C79945 phosphoribosyl pyrophosphate amidotransferase protein-coding common_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128 chr3 20057428 20057642 + 1.15812782348128 NA promoter-TSS (NM_009210) promoter-TSS (NM_009210) -276 NM_009210 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-36 chr8 119432025 119432467 + 1.15812782348128 NA Intergenic Intergenic -4916 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-29 chr5 150665890 150666137 + 1.15812782348128 NA promoter-TSS (NM_201369) promoter-TSS (NM_201369) -401 NM_201369 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|Gm38758|zag1 NEDD4 binding protein 2-like 2 protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-22 chr19 53507036 53507379 + 1.15812782348128 NA Intergenic Intergenic -22111 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128 chr11 54113814 54114049 + 1.15812782348128 NA intron (NM_001136076, intron 5 of 15) intron (NM_001136076, intron 5 of 15) 13007 NM_011031 18452 Mm.3705 NM_011031 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide protein-coding unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-9 chr11 74863125 74863422 + 1.15812782348128 NA intron (NM_197943, intron 11 of 22) intron (NM_197943, intron 11 of 22) 4921 NR_105891 102465558 NR_105891 ENSMUSG00000098317 Mir6926 Gm27949|mmu-mir-6926 microRNA 6926 ncRNA unique_peak1_21_8_1.01630538072799_3.67807769180631_1.15812782348128-13 chr14 41422062 41422490 + 1.15812782348128 NA Intergenic Intergenic -150935 NM_001358037 100041722 Mm.425891 NM_001358037 ENSMUSG00000090440 1700049E17Rik2 - tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2 protein-coding unique_peak2_9_18_-1.19117559089867_3.65233971799425_1.15812782348128-9 chr18 35845147 35845460 + 1.15812782348128 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) -9384 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_120_73_0.418857395347374_6.41888206330264_1.15774943572109 chr7 98701983 98702710 + 1.15774943572109 NA promoter-TSS (NM_028410) promoter-TSS (NM_028410) 582 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak2_95_56_0.463875673134021_6.06482785073175_1.15609038776772-2 chr7 81933326 81934257 + 1.15609038776772 NA intron (NM_013886, intron 1 of 5) CpG 668 NM_013886 29877 Mm.392934 NM_013886 ENSMUSG00000025104 Hdgfl3 2700022B06Rik|HRP-3|Hdgfrp3 HDGF like 3 protein-coding common_peak1_96_56_0.478720540246337_6.07225028428791_1.15609038776772 chr6 146897825 146899160 + 1.15609038776772 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 9998 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_96_56_0.478720540246337_6.07225028428791_1.15609038776772 chr11 65787400 65788258 + 1.15609038776772 NA intron (NM_001316368, intron 1 of 10) CpG 530 NM_009157 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding common_peak1_95_56_0.463875673134021_6.06482785073175_1.15609038776772 chr1 105663935 105664805 + 1.15609038776772 NA promoter-TSS (NM_013784) promoter-TSS (NM_013784) 509 NM_029349 227446 Mm.337339 NM_029349 ENSMUSG00000026319 2310035C23Rik 6430401N10|Kiaa1468|Relch|mKIAA1468 RIKEN cDNA 2310035C23 gene protein-coding common_peak2_67_79_-0.519152217124155_6.06235198632529_1.15609038776772-2 chr8 36164402 36164915 + 1.15609038776772 NA Intergenic Intergenic 8648 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak2_95_56_0.463875673134021_6.06482785073175_1.15609038776772 chr11 49250418 49251263 + 1.15609038776772 NA intron (NM_001110150, intron 1 of 2) CpG 288 NM_001110150 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_67_79_-0.519152217124155_6.06235198632529_1.15609038776772 chr13 113841460 113842462 + 1.15609038776772 NA intron (NM_172595, intron 1 of 4) (TA)n|Simple_repeat|Simple_repeat 47453 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak1_95_56_0.463875673134021_6.06482785073175_1.15609038776772-2 chr10 23176583 23177645 + 1.15609038776772 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 172776 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_138_86_0.384033555534359_6.63496027361591_1.15504985496867-2 chr3 37348244 37349525 + 1.15504985496867 NA exon (NM_008006, exon 1 of 3) exon (NM_008006, exon 1 of 3) 231 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak1_104_114_-0.42035343574436_6.63531333307219_1.15504985496867 chr5 86804338 86804982 + 1.15504985496867 NA intron (NM_177680, intron 1 of 16) CpG 394 NM_001359907 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak1_139_86_0.394302537550588_6.64009476462402_1.15504985496867 chr3 105958571 105959304 + 1.15504985496867 NA promoter-TSS (NM_027432) promoter-TSS (NM_027432) -561 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak2_104_114_-0.42035343574436_6.63531333307219_1.15504985496867 chr8 126847282 126848125 + 1.15504985496867 NA Intergenic Intergenic -1317 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_138_86_0.384033555534359_6.63496027361591_1.15504985496867 chr11 77982835 77984363 + 1.15504985496867 NA intron (NM_174852, intron 1 of 14) intron (NM_174852, intron 1 of 14) 783 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak2_55_67_-0.562818727031659_5.80605347773451_1.1534274303752-3 chr9 114781126 114782126 + 1.1534274303752 NA intron (NM_001252479, intron 1 of 3) CpG 367 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding common_peak2_81_46_0.5163707159228_5.81277420963904_1.1534274303752 chr8 104247969 104248538 + 1.1534274303752 NA intron (NR_045642, intron 1 of 8) intron (NR_045642, intron 1 of 8) 305 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak2_55_67_-0.562818727031659_5.80605347773451_1.1534274303752-2 chr11 35955248 35955644 + 1.1534274303752 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 24643 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_55_67_-0.562818727031659_5.80605347773451_1.1534274303752 chr1 120119762 120120740 + 1.1534274303752 NA promoter-TSS (NM_001172074) promoter-TSS (NM_001172074) 668 NM_001037999 13167 Mm.2785 NM_007830 ENSMUSG00000026385 Dbi ACBD1|Acbp|EP|endozepine diazepam binding inhibitor protein-coding common_peak1_81_46_0.5163707159228_5.81277420963904_1.1534274303752 chr14 54224547 54225527 + 1.1534274303752 NA Intergenic Intergenic 28892 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_61_73_-0.539003826076168_5.93995145259087_1.1531082676685 chr8 94772192 94773344 + 1.1531082676685 NA intron (NM_009142, intron 1 of 2) intron (NM_009142, intron 1 of 2) 588 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak1_88_51_0.487867508258836_5.94437347227051_1.15310826766849 chr3 108881197 108882045 + 1.15310826766849 NA intron (NM_001165965, intron 3 of 11) intron (NM_001165965, intron 3 of 11) 8387 NM_177091 320181 Mm.244233 NM_177091 ENSMUSG00000045326 Fndc7 E230011A21Rik fibronectin type III domain containing 7 protein-coding common_peak2_88_51_0.487867508258836_5.94437347227051_1.15310826766849 chr19 3905090 3905805 + 1.15310826766849 NA promoter-TSS (NM_016921) promoter-TSS (NM_016921) -217 NM_016921 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak2_113_122_-0.399570428139883_6.7427292912693_1.15302373940015 chr5 117357299 117358283 + 1.15302373940015 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 486 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_457_319_0.213175253551588_8.42851572166316_1.15280275752767 chr15 83563393 83566618 + 1.15280275752767 NA intron (NM_009775, intron 1 of 3) B2_Mm2|SINE|B2 1432 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak2_29_41_-0.761784877579632_5.01142498398895_1.15174830603352 chr14 28663663 28664149 + 1.15174830603352 NA Intergenic Intergenic 152501 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352-7 chr7 99858173 99858840 + 1.15174830603352 NA promoter-TSS (NM_001164258) promoter-TSS (NM_001164258) 377 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding unique_peak2_29_41_-0.761784877579632_5.01142498398895_1.15174830603352 chr11 58201275 58202096 + 1.15174830603352 NA exon (NM_018738, exon 2 of 3) exon (NM_018738, exon 2 of 3) 2129 NM_018738 16145 Mm.33902 NM_018738 ENSMUSG00000078853 Igtp AW558444|Irgm3 interferon gamma induced GTPase protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352-4 chr15 33907518 33908255 + 1.15174830603352 NA Intergenic Intergenic -174833 NM_001357926 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352-5 chr2 38533428 38534263 + 1.15174830603352 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 21969 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_29_41_-0.761784877579632_5.01142498398895_1.15174830603352-3 chr8 36740538 36741205 + 1.15174830603352 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -7817 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352-2 chr10 62577917 62578442 + 1.15174830603352 NA exon (NM_028197, exon 1 of 7) exon (NM_028197, exon 1 of 7) 278 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak1_29_41_-0.761784877579632_5.01142498398895_1.15174830603352 chr12 31055960 31056417 + 1.15174830603352 NA Intergenic Intergenic -17780 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352-3 chr14 45493562 45494367 + 1.15174830603352 NA intron (NM_146054, intron 3 of 14) intron (NM_146054, intron 3 of 14) 36101 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak2_29_41_-0.761784877579632_5.01142498398895_1.15174830603352-2 chr5 105797940 105798399 + 1.15174830603352 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -78399 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352-6 chr3 95479331 95479707 + 1.15174830603352 NA intron (NM_001037737, intron 8 of 21) intron (NM_001037737, intron 8 of 21) -19691 NM_007802 13038 Mm.272085 NM_007802 ENSMUSG00000028111 Ctsk AI323530|MMS10-Q|Ms10q|catK cathepsin K protein-coding common_peak1_49_25_0.661859144011217_5.0313692901467_1.15174830603352 chr1 183934229 183934755 + 1.15174830603352 NA Intergenic Intergenic 99506 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_202_131_0.325122972019699_7.2069556053683_1.15095276495618 chr15 102099292 102101558 + 1.15095276495618 NA Intergenic CpG -2509 NM_001355636 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_190_123_0.328033874560142_7.11821324766695_1.15059212292305 chr17 67353154 67354494 + 1.15059212292305 NA intron (NM_001357625, intron 1 of 32) CpG 635 NM_008984 19274 Mm.311809 NM_008984 ENSMUSG00000033278 Ptprm RPTPmu|mKIAA4044 protein tyrosine phosphatase, receptor type, M protein-coding common_peak2_97_107_-0.428584338370658_6.54059533297814_1.15052193417603 chr1 128416600 128417342 + 1.15052193417603 NA intron (NM_145507, intron 1 of 3) CpG 445 NM_177445 226414 Mm.28693 NM_145507 ENSMUSG00000026356 Dars 5730439G15Rik aspartyl-tRNA synthetase protein-coding common_peak1_130_80_0.402212305557766_6.54095615566351_1.15052193417601 chr7 16614093 16615074 + 1.15052193417601 NA 5' UTR (NM_172739, exon 1 of 7) 5' UTR (NM_172739, exon 1 of 7) 410 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak2_181_184_-0.318294195633557_7.37223436269953_1.15035807857415 chr11 104441064 104443050 + 1.15035807857415 NA 5' UTR (NM_001081045, exon 1 of 14) 5' UTR (NM_001081045, exon 1 of 14) 234 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_44_56_-0.621521866738157_5.52212908079566_1.1498986797243 chr7 84338461 84339255 + 1.1498986797243 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 71180 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_44_56_-0.621521866738157_5.52212908079566_1.1498986797243 chr1 162570756 162571448 + 1.1498986797243 NA intron (NM_016796, intron 1 of 7) CpG 274 NM_016796 53330 Mm.10699 NM_016796 ENSMUSG00000026696 Vamp4 D1Ertd147e|Vamp-4 vesicle-associated membrane protein 4 protein-coding common_peak2_44_56_-0.621521866738157_5.52212908079566_1.1498986797243-2 chr9 53384045 53384590 + 1.1498986797243 NA intron (NM_212445, intron 1 of 7) CpG 294 NM_212445 68304 Mm.427519 NM_212445 ENSMUSG00000034487 Kdelc2 2010004J24Rik|4833410J10Rik|AW549401 KDEL (Lys-Asp-Glu-Leu) containing 2 protein-coding common_peak1_67_37_0.554848364319622_5.5253516956034_1.14989867972429 chr5 31564665 31565623 + 1.14989867972429 NA Intergenic Intergenic 6253 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak2_74_86_-0.499809031468965_6.19303898011425_1.14988703131809 chr2 117803235 117804597 + 1.14988703131809 NA TTS (NR_126427) TTS (NR_126427) 8886 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_74_86_-0.499809031468965_6.19303898011425_1.14988703131809-2 chr8 36722515 36723686 + 1.14988703131809 NA intron (NM_001194940, intron 5 of 17) B4A|SINE|B4 9954 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_75_86_-0.480835020876826_6.20252598541031_1.14988703131809 chr1 186585751 186586926 + 1.14988703131809 NA Intergenic Intergenic -27657 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_104_62_0.447856691700098_6.20120826934997_1.14988703131808 chr10 81137708 81138553 + 1.14988703131808 NA intron (NM_010731, intron 1 of 2) CpG 1859 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_131_139_-0.376326991693697_6.94111952109812_1.14811429743974 chr17 34950796 34952870 + 1.14811429743974 NA promoter-TSS (NR_028527) promoter-TSS (NR_028527) 635 NR_027943 68763 Mm.28895 NR_015536 ENSMUSG00000092203 1110038B12Rik 0610009C20Rik|0910001G04Rik RIKEN cDNA 1110038B12 gene ncRNA common_peak2_169_108_0.347193472166916_6.94178106086038_1.14811429743971 chr5 105731951 105733719 + 1.14811429743971 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 32025 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_169_108_0.347193472166916_6.94178106086038_1.14811429743971-2 chr19 43510965 43512083 + 1.14811429743971 NA intron (NM_010324, intron 2 of 8) intron (NM_010324, intron 2 of 8) 13081 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_169_108_0.347193472166916_6.94178106086038_1.14811429743971 chr11 94927246 94928913 + 1.14811429743971 NA Intergenic Intergenic -8145 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak2_82_93_-0.466265230786719_6.32145623628428_1.14741353597722 chr5 110769889 110770650 + 1.14741353597722 NA promoter-TSS (NR_152254) promoter-TSS (NR_152254) 448 NM_029337 75560 Mm.270487 NM_029337 ENSMUSG00000029505 Ep400 1700020J09Rik|AU023439|mDomino|mKIAA1498|p400 E1A binding protein p400 protein-coding common_peak1_82_93_-0.466265230786719_6.32145623628428_1.14741353597722 chr5 110769878 110770659 + 1.14741353597722 NA promoter-TSS (NR_152254) promoter-TSS (NR_152254) 449 NM_029337 75560 Mm.270487 NM_029337 ENSMUSG00000029505 Ep400 1700020J09Rik|AU023439|mDomino|mKIAA1498|p400 E1A binding protein p400 protein-coding common_peak1_113_68_0.434419620421187_6.32573426698876_1.14741353597719 chr3 144090077 144091267 + 1.14741353597719 NA Intergenic Intergenic 111660 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_160_101_0.365032029825644_6.85494135688432_1.1457749779709 chr2 13370662 13372174 + 1.1457749779709 NA intron (NM_001081084, intron 31 of 66) intron (NM_001081084, intron 31 of 66) -100003 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak2_123_131_-0.380999559378916_6.853894339669_1.14577497797088 chr13 60046863 60049063 + 1.14577497797088 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 18252 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_251_167_0.286942916321586_7.53578888093955_1.14540694467523 chr19 55256712 55259567 + 1.14540694467523 NA intron (NM_027976, intron 1 of 21) intron (NM_027976, intron 1 of 21) 4770 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak1_181_116_0.34272254529935_7.04172599223308_1.14537278609584 chr9 67048021 67049159 + 1.14537278609584 NA intron (NM_001164249, intron 1 of 8) CpG-15124 623 NM_001164255 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_141_148_-0.361602758328673_7.03836714129782_1.14537278609584-2 chr2 26910836 26912025 + 1.14537278609584 NA promoter-TSS (NM_011513) promoter-TSS (NM_011513) 623 NM_013721 27176 Mm.328601 NM_013721 ENSMUSG00000062647 Rpl7a Surf3 ribosomal protein L7A protein-coding common_peak2_141_148_-0.361602758328673_7.03836714129782_1.14537278609584 chr1 133660012 133661643 + 1.14537278609584 NA promoter-TSS (NM_001166552) promoter-TSS (NM_001166552) 58 NM_001166552 667118 Mm.245357 NM_001166552 ENSMUSG00000102049 Zbed6 Gm8466|MGR zinc finger, BED type containing 6 protein-coding common_peak2_182_185_-0.318222119150945_7.38004775153256_1.14525238035742 chr5 93205728 93207791 + 1.14525238035742 NA promoter-TSS (NM_017367) promoter-TSS (NM_017367) 241 NM_029363 75610 Mm.175502 NM_029363 ENSMUSG00000029384 2010109A12Rik - RIKEN cDNA 2010109A12 gene protein-coding common_peak2_161_166_-0.337376818919682_7.21501588301421_1.14522354262754 chr2 61593124 61594647 + 1.14522354262754 NA intron (NR_149324, intron 1 of 9) intron (NR_149324, intron 1 of 9) 788 NR_149323 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054-3 chr3 126831924 126832669 + 1.1451285992054 NA intron (NM_001025438, intron 14 of 18) intron (NM_001025438, intron 14 of 18) 111090 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding common_peak2_39_51_-0.657797754742662_5.37154084076976_1.1451285992054 chr13 6418081 6418808 + 1.1451285992054 NA Intergenic Intergenic -129713 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054 chr7 101301223 101302342 + 1.1451285992054 NA intron (NR_152152, intron 1 of 16) CpG 306 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054-5 chr5 21500476 21501177 + 1.1451285992054 NA intron (NM_001199632, intron 17 of 20) intron (NM_001199632, intron 17 of 20) -42701 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_39_51_-0.657797754742662_5.37154084076976_1.1451285992054 chr19 24732728 24733080 + 1.1451285992054 NA intron (NM_175013, intron 8 of 10) intron (NM_175013, intron 8 of 10) 58896 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054 chr1 186705068 186705945 + 1.1451285992054 NA 5' UTR (NM_001329107, exon 1 of 8) 5' UTR (NM_001329107, exon 1 of 8) 483 NM_009367 21808 Mm.18213 NM_009367 ENSMUSG00000039239 Tgfb2 BB105277|Tgf-beta2|Tgfb-2 transforming growth factor, beta 2 protein-coding common_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054-4 chr4 35225198 35225663 + 1.1451285992054 NA intron (NM_001081343, intron 1 of 10) CpG 450 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585|C9orf72 RIKEN cDNA 3110043O21 gene protein-coding common_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054-2 chr3 32529513 32530045 + 1.1451285992054 NA intron (NM_024200, intron 1 of 17) CpG 297 NM_024200 67414 Mm.290414 NM_024200 ENSMUSG00000027668 Mfn1 2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032 mitofusin 1 protein-coding unique_peak1_61_33_0.582986698302443_5.37895619040156_1.1451285992054-2 chr8 70543008 70544045 + 1.1451285992054 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 3851 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak2_114_123_-0.398741089409986_6.75482576568188_1.14512375503454 chr18 75384340 75386074 + 1.14512375503454 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 17842 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_114_123_-0.398741089409986_6.75482576568188_1.14512375503454 chr13 15463251 15464819 + 1.14512375503454 NA 5' UTR (NM_008130, exon 1 of 15) 5' UTR (NM_008130, exon 1 of 15) 312 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak2_55_29_0.617753518610161_5.2157673549136_1.14508711250721-3 chr5 29843434 29843848 + 1.14508711250721 NA Intergenic Intergenic -107705 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_34_46_-0.703232859131834_5.20297242211172_1.14508711250721 chr10 58497957 58498749 + 1.14508711250721 NA intron (NM_001162956, intron 1 of 15) intron (NM_001162956, intron 1 of 15) 416 NM_001162956 76138 Mm.211744 NM_001162956 ENSMUSG00000038010 Ccdc138 6230424H07Rik|BC042726 coiled-coil domain containing 138 protein-coding common_peak1_55_29_0.617753518610161_5.2157673549136_1.14508711250721-2 chr18 60892721 60893320 + 1.14508711250721 NA Intergenic Intergenic -19220 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_34_46_-0.703232859131834_5.20297242211172_1.14508711250721-3 chr2 32288332 32288881 + 1.14508711250721 NA promoter-TSS (NR_110965) promoter-TSS (NR_110965) 353 NM_001080968 99412 Mm.106376 NM_133852 ENSMUSG00000002546 Golga2 AW555139|GM130|mKIAA4150 golgi autoantigen, golgin subfamily a, 2 protein-coding common_peak1_34_46_-0.703232859131834_5.20297242211172_1.14508711250721 chr11 116334036 116334614 + 1.14508711250721 NA exon (NM_008240, exon 2 of 3) exon (NM_008240, exon 2 of 3) 1029 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak1_55_29_0.617753518610161_5.2157673549136_1.14508711250721-4 chr5 147589038 147589888 + 1.14508711250721 NA intron (NM_010228, intron 19 of 29) intron (NM_010228, intron 19 of 29) 136525 NM_010228 14254 Mm.389712 NM_010228 ENSMUSG00000029648 Flt1 AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1 FMS-like tyrosine kinase 1 protein-coding common_peak1_34_46_-0.703232859131834_5.20297242211172_1.14508711250721-2 chr4 62501909 62502224 + 1.14508711250721 NA intron (NM_024257, intron 1 of 1) CpG 134 NM_024257 72748 Mm.41506 NM_024257 ENSMUSG00000038422 Hdhd3 2810435D12Rik haloacid dehalogenase-like hydrolase domain containing 3 protein-coding common_peak2_55_29_0.617753518610161_5.2157673549136_1.14508711250721 chr14 24490808 24491126 + 1.14508711250721 NA 5' UTR (NM_001360586, exon 1 of 6) 5' UTR (NM_001360586, exon 1 of 6) 214 NM_001360586 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding common_peak1_55_29_0.617753518610161_5.2157673549136_1.14508711250721 chr10 89685664 89686220 + 1.14508711250721 NA promoter-TSS (NR_130956) promoter-TSS (NR_130956) 352 NM_001358843 213326 Mm.27651 NM_198021 ENSMUSG00000069539 Scyl2 AU015688|AW536445|BC030932|CVAK104|D10Ertd802e SCY1-like 2 (S. cerevisiae) protein-coding common_peak2_55_29_0.617753518610161_5.2157673549136_1.14508711250721-2 chr2 27887498 27887918 + 1.14508711250721 NA intron (NM_015734, intron 1 of 65) intron (NM_015734, intron 1 of 65) 1283 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak2_34_46_-0.703232859131834_5.20297242211172_1.14508711250721-4 chr5 25222923 25223506 + 1.14508711250721 NA intron (NM_144908, intron 1 of 11) intron (NM_144908, intron 1 of 11) 342 NM_144908 231050 Mm.246718 NM_144908 ENSMUSG00000038072 Galnt11 A430075I06Rik|AI648252|E430002F06Rik polypeptide N-acetylgalactosaminyltransferase 11 protein-coding unique_peak2_34_46_-0.703232859131834_5.20297242211172_1.14508711250721 chr15 59554707 59555393 + 1.14508711250721 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -93604 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_55_29_0.617753518610161_5.2157673549136_1.14508711250721-3 chr5 135879726 135880321 + 1.14508711250721 NA Intergenic Intergenic -7896 NM_013560 15507 Mm.13849 NM_013560 ENSMUSG00000004951 Hspb1 27kDa|Hsp25 heat shock protein 1 protein-coding common_peak1_55_29_0.617753518610161_5.2157673549136_1.14508711250721-5 chr7 82404798 82405328 + 1.14508711250721 NA intron (NM_001190374, intron 3 of 29) intron (NM_001190374, intron 3 of 29) 69369 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_34_46_-0.703232859131834_5.20297242211172_1.14508711250721-2 chr16 8738748 8739340 + 1.14508711250721 NA promoter-TSS (NM_001003918) promoter-TSS (NM_001003918) -702 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak2_68_80_-0.516161098860915_6.08176945345417_1.14348743388917 chr6 47772091 47772780 + 1.14348743388917 NA Intergenic CpG -19510 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_69_80_-0.495548989912066_6.09207550792859_1.14348743388917 chr7 25658399 25658997 + 1.14348743388917 NA promoter-TSS (NM_138586) promoter-TSS (NM_138586) 63 NM_007533 12039 Mm.25848 NM_007533 ENSMUSG00000060376 Bckdha - branched chain ketoacid dehydrogenase E1, alpha polypeptide protein-coding common_peak2_69_80_-0.495548989912066_6.09207550792859_1.14348743388917 chr7 109959597 109960735 + 1.14348743388917 NA exon (NM_021494, exon 1 of 23) exon (NM_021494, exon 1 of 23) 256 NM_021494 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding common_peak2_97_57_0.468322168665239_6.09214207946019_1.14348743388916 chr7 110773211 110774284 + 1.14348743388916 NA intron (NM_009667, intron 1 of 14) intron (NM_009667, intron 1 of 14) 1143 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_279_272_-0.262566087093781_7.96147409737296_1.14291267305077 chr18 36402937 36405735 + 1.14291267305077 NA 3' UTR (NM_026027, exon 4 of 4) 3' UTR (NM_026027, exon 4 of 4) 50159 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-8 chr19 43530772 43530982 + 1.14218153353838 NA Intergenic Intergenic -6272 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-29 chr5 146299571 146299807 + 1.14218153353838 NA intron (NM_001359990, intron 11 of 12) intron (NM_001359990, intron 11 of 12) 68439 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding unique_peak1_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-2 chr15 64479629 64479948 + 1.14218153353838 NA Intergenic Intergenic -96869 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-5 chr13 15762298 15762501 + 1.14218153353838 NA Intergenic Intergenic 40231 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-29 chr19 6138594 6138802 + 1.14218153353838 NA intron (NM_019722, intron 1 of 4) intron (NM_019722, intron 1 of 4) 2439 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-42 chr5 122988003 122988203 + 1.14218153353838 NA intron (NM_001003953, intron 1 of 22) intron (NM_001003953, intron 1 of 22) 996 NM_001003953 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-2 chr1 36444841 36445093 + 1.14218153353838 NA intron (NM_001013374, intron 1 of 7) CpG 304 NM_001013374 214895 Mm.287854 NM_001013374 ENSMUSG00000001143 Lman2l A630028F14Rik|VIP36-like|VIPL lectin, mannose-binding 2-like protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-11 chr12 3235013 3235224 + 1.14218153353838 NA promoter-TSS (NR_015551) promoter-TSS (NR_015551) -673 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-4 chr17 47266001 47266269 + 1.14218153353838 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 35905 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-10 chr6 140423512 140423783 + 1.14218153353838 NA promoter-TSS (NM_144920) promoter-TSS (NM_144920) -452 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-2 chr3 109155077 109155335 + 1.14218153353838 NA intron (NM_172685, intron 4 of 9) RMER5|LTR|ERV1 32057 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-4 chr17 24414172 24414362 + 1.14218153353838 NA promoter-TSS (NM_009070) promoter-TSS (NM_009070) 246 NR_033554 654822 Mm.489806 NM_001039561 ENSMUSG00000073437 D330041H03Rik - RIKEN cDNA D330041H03 gene ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-36 chr3 122401062 122401346 + 1.14218153353838 NA Intergenic Intergenic -18553 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak1_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-4 chr9 13322586 13322791 + 1.14218153353838 NA Intergenic Intergenic 75732 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-50 chr7 118712678 118712939 + 1.14218153353838 NA intron (NM_182995, intron 1 of 15) CpG 265 NM_182995 101565 Mm.23279 NM_182995 ENSMUSG00000033904 Ccp110 6330503K22Rik|AA415922|AI427129|AW557948|CP110|cep110 centriolar coiled coil protein 110 protein-coding unique_peak1_9_11_-0.528210578176238_3.32085721163304_1.14218153353838 chr1 90556818 90557010 + 1.14218153353838 NA Intergenic Intergenic -46511 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-14 chr16 91555178 91555415 + 1.14218153353838 NA intron (NM_008338, intron 2 of 6) intron (NM_008338, intron 2 of 6) 8202 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-17 chr13 85376279 85376507 + 1.14218153353838 NA Intergenic Intergenic -86907 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-27 chr5 77398526 77398866 + 1.14218153353838 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 9349 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-53 chr8 105484602 105484844 + 1.14218153353838 NA promoter-TSS (NM_001357252) promoter-TSS (NM_001357252) -296 NM_001357252 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-32 chr7 112645169 112645428 + 1.14218153353838 NA Intergenic Intergenic -34022 NM_001166584 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-5 chr10 87968295 87968550 + 1.14218153353838 NA TTS (NR_000040) TTS (NR_000040) 1751 NR_000040 22172 Mm.391420 NR_000040 Tyms-ps - thymidylate synthase, pseudogene pseudo unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-57 chr9 42722264 42722453 + 1.14218153353838 NA intron (NM_175481, intron 3 of 20) intron (NM_175481, intron 3 of 20) 222013 NM_175481 110637 Mm.370291 NM_175481 ENSMUSG00000032017 Grik4 6330551K01Rik|GluK4|GluRgamma1|KA-1|KA1 glutamate receptor, ionotropic, kainate 4 protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-2 chr1 171440528 171440736 + 1.14218153353838 NA intron (NM_172647, intron 1 of 9) intron (NM_172647, intron 1 of 9) 3071 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-2 chr15 59651880 59652095 + 1.14218153353838 NA intron (NM_144549, intron 2 of 2) intron (NM_144549, intron 2 of 2) 3333 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-34 chr7 141371692 141371984 + 1.14218153353838 NA Intergenic B3|SINE|B2 -6728 NR_033532 320871 Mm.475463 NM_177280 ENSMUSG00000086844 B230206H07Rik - RIKEN cDNA B230206H07 gene ncRNA unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-24 chr3 84220370 84220714 + 1.14218153353838 NA intron (NM_001271726, intron 1 of 11) intron (NM_001271726, intron 1 of 11) 335 NM_030706 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-35 chr3 55307026 55307275 + 1.14218153353838 NA intron (NM_001357475, intron 3 of 16) intron (NM_001357475, intron 3 of 16) 64786 NM_001357466 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-32 chr2 75981747 75981962 + 1.14218153353838 NA 5' UTR (NM_030188, exon 1 of 1) 5' UTR (NM_030188, exon 1 of 1) 113 NM_030188 78802 Mm.282339 NM_030188 ENSMUSG00000075271 Ttc30a1 4930506L13Rik tetratricopeptide repeat domain 30A1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-9 chr15 11771683 11771931 + 1.14218153353838 NA Intergenic Intergenic 133867 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-37 chr8 120490547 120490788 + 1.14218153353838 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 1801 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-45 chr6 87278505 87278806 + 1.14218153353838 NA intron (NM_054041, intron 8 of 17) intron (NM_054041, intron 8 of 17) 57120 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-4 chr10 79937392 79937613 + 1.14218153353838 NA intron (NM_001288625, intron 3 of 8) intron (NM_001288625, intron 3 of 8) 10161 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-17 chr18 23048164 23048375 + 1.14218153353838 NA Intergenic Intergenic -6588 NM_001361224 319211 Mm.209896 NM_199024 ENSMUSG00000041923 Nol4 1700013J13Rik|4930568N03Rik|Gm1262 nucleolar protein 4 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-44 chr6 66944525 66944713 + 1.14218153353838 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) 47728 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-13 chr12 99628253 99628454 + 1.14218153353838 NA promoter-TSS (NR_045288) promoter-TSS (NR_045288) -379 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-56 chr9 37735883 37736124 + 1.14218153353838 NA Intergenic Intergenic -4942 NM_207664 406176 Mm.356219 NM_207664 ENSMUSG00000110526 Olfr151 M71|MOR171-2 olfactory receptor 151 protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-6 chr2 27418693 27418923 + 1.14218153353838 NA intron (NM_009500, intron 1 of 27) intron (NM_009500, intron 1 of 27) 8800 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-26 chr5 57756911 57757135 + 1.14218153353838 NA intron (NM_001310608, intron 1 of 3) intron (NM_001310608, intron 1 of 3) 38942 NM_018764 54216 Mm.332387 NM_018764 ENSMUSG00000029108 Pcdh7 - protocadherin 7 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-6 chr15 69078843 69079215 + 1.14218153353838 NA intron (NM_010158, intron 7 of 8) intron (NM_010158, intron 7 of 8) 150609 NM_010158 13992 Mm.17964 NM_010158 ENSMUSG00000022332 Khdrbs3 Etle|SLM-2|Salp|Slm2|T-STAR KH domain containing, RNA binding, signal transduction associated 3 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-6 chr10 98325095 98325342 + 1.14218153353838 NA intron (NR_045179, intron 4 of 4) intron (NR_045179, intron 4 of 4) 26649 NR_045179 667438 Mm.414522 NR_045179 ENSMUSG00000112896 Gm8633 EG667438 predicted gene 8633 ncRNA unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838 chr1 9745492 9745769 + 1.14218153353838 NA exon (NM_173443, exon 1 of 3) exon (NM_173443, exon 1 of 3) -2018 NR_040462 73331 Mm.460470 NR_040462 1700034P13Rik - RIKEN cDNA 1700034P13 gene ncRNA unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-35 chr7 145112512 145112814 + 1.14218153353838 NA Intergenic Intergenic 95456 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-3 chr10 80039139 80039365 + 1.14218153353838 NA intron (NM_025554, intron 1 of 6) B3|SINE|B2 407 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-6 chr18 32148769 32148993 + 1.14218153353838 NA Intergenic Intergenic -9311 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-33 chr2 93260346 93260547 + 1.14218153353838 NA intron (NM_183180, intron 2 of 9) intron (NM_183180, intron 2 of 9) 72898 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding unique_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-2 chr15 11826171 11826430 + 1.14218153353838 NA Intergenic Intergenic 79374 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838 chr1 151339411 151339654 + 1.14218153353838 NA Intergenic ID_B1|SINE|B4 -4954 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-19 chr14 28113571 28113844 + 1.14218153353838 NA intron (NM_001347497, intron 15 of 19) intron (NM_001347497, intron 15 of 19) -391766 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-6 chr12 80463582 80463822 + 1.14218153353838 NA intron (NM_133798, intron 1 of 8) CpG 607 NM_133798 97827 Mm.206631 NM_133798 ENSMUSG00000032705 Exd2 4930539P14Rik|C85658|Exdl2 exonuclease 3'-5' domain containing 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-21 chr15 85554584 85554772 + 1.14218153353838 NA intron (NM_009528, intron 2 of 3) intron (NM_009528, intron 2 of 3) 23392 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-38 chr4 78234909 78235211 + 1.14218153353838 NA Intergenic B1F1|SINE|Alu -23165 NM_011211 19266 Mm.184021 NM_011211 ENSMUSG00000028399 Ptprd 1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta protein tyrosine phosphatase, receptor type, D protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-9 chr7 110006343 110006542 + 1.14218153353838 NA intron (NR_037959, intron 1 of 2) intron (NR_037959, intron 1 of 2) 204 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA unique_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-5 chr8 78741687 78741901 + 1.14218153353838 NA Intergenic Intergenic 79358 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-3 chr10 86109243 86109482 + 1.14218153353838 NA intron (NR_038024, intron 2 of 2) L2a|LINE|L2 13508 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-34 chr3 19707343 19707553 + 1.14218153353838 NA Intergenic Intergenic -12052 NM_205769 12918 Mm.290689 NM_205769 ENSMUSG00000049796 Crh CRF|Gm1347 corticotropin releasing hormone protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838 chr10 53379080 53379291 + 1.14218153353838 NA intron (NM_001204983, intron 1 of 12) intron (NM_001204983, intron 1 of 12) 666 NM_001204983 100038725 Mm.441403 NM_001204983 ENSMUSG00000038594 Cep85l Gm9766 centrosomal protein 85-like protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-16 chr17 79334820 79335125 + 1.14218153353838 NA exon (NM_026514, exon 2 of 2) exon (NM_026514, exon 2 of 2) 20119 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-7 chr12 100776862 100777121 + 1.14218153353838 NA Intergenic Intergenic -2066 NM_001361023 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-5 chr12 53697853 53698114 + 1.14218153353838 NA intron (NM_013780, intron 4 of 11) intron (NM_013780, intron 4 of 11) 449306 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-38 chr9 44904794 44904994 + 1.14218153353838 NA Intergenic Intergenic 15848 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-51 chr8 33979333 33979607 + 1.14218153353838 NA Intergenic Intergenic -49607 NM_001042675 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-12 chr15 102969922 102970206 + 1.14218153353838 NA intron (NM_010462, intron 1 of 1) intron (NM_010462, intron 1 of 1) 3268 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding common_peak1_9_11_-0.528210578176238_3.32085721163304_1.14218153353838 chr11 31873096 31873284 + 1.14218153353838 NA exon (NM_001290676, exon 1 of 9) exon (NM_001290676, exon 1 of 9) 2250 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-8 chr11 72135709 72135909 + 1.14218153353838 NA promoter-TSS (NM_001081641) promoter-TSS (NM_001081641) 80 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-15 chr13 73678476 73678710 + 1.14218153353838 NA promoter-TSS (NM_001136087) promoter-TSS (NM_001136087) -570 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838 chr1 82831735 82831952 + 1.14218153353838 NA Intergenic Intergenic -7617 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838 chr10 39262191 39262404 + 1.14218153353838 NA Intergenic Intergenic -98503 NM_001127376 327743 Mm.208111 NM_001127376 ENSMUSG00000062074 Wisp3 CCN6|Gm735|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-40 chr5 64868324 64868566 + 1.14218153353838 NA Intergenic Intergenic 64254 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-15 chr16 93130706 93131027 + 1.14218153353838 NA Intergenic Intergenic 222323 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-7 chr4 89529059 89529280 + 1.14218153353838 NA Intergenic Intergenic -159029 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-21 chr2 156741091 156741300 + 1.14218153353838 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 19916 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-5 chr17 45747981 45748181 + 1.14218153353838 NA intron (NR_152153, intron 1 of 4) MIR|SINE|MIR 13575 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-26 chr17 78451456 78451689 + 1.14218153353838 NA Intergenic Intergenic -33420 NM_001285940 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-37 chr4 63249742 63250156 + 1.14218153353838 NA intron (NM_025685, intron 7 of 60) intron (NM_025685, intron 7 of 60) -6902 NR_030477 735262 NR_030477 ENSMUSG00000070102 Mir455 Mirn455|mir-455|mmu-mir-455 microRNA 455 ncRNA unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-20 chr2 131950400 131950671 + 1.14218153353838 NA promoter-TSS (NM_001278520) promoter-TSS (NM_001278520) -326 NM_001278257 26434 Mm.180750 NM_023043 ENSMUSG00000027338 Prnd AI450264|Dpl|PrPLP|doppel prion like protein doppel protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-18 chr13 112025857 112026102 + 1.14218153353838 NA Intergenic Intergenic 158043 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 - predicted gene 15326 ncRNA unique_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-4 chr5 105415306 105415507 + 1.14218153353838 NA promoter-TSS (NM_001033550) promoter-TSS (NM_001033550) -369 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b 2210408K08Rik|R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-9 chr6 97212428 97212705 + 1.14218153353838 NA intron (NM_022992, intron 1 of 2) B1_Mur3|SINE|Alu 1774 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-11 chr15 99802278 99802525 + 1.14218153353838 NA intron (NM_001113545, intron 6 of 10) intron (NM_001113545, intron 6 of 10) 17748 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding unique_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838 chr13 40859433 40859633 + 1.14218153353838 NA promoter-TSS (NM_023887) promoter-TSS (NM_023887) -235 NM_023887 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-8 chr4 89507925 89508136 + 1.14218153353838 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -180168 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-54 chr8 120903461 120903650 + 1.14218153353838 NA Intergenic Intergenic 164916 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-33 chr7 127386751 127386984 + 1.14218153353838 NA exon (NM_030226, exon 1 of 3) exon (NM_030226, exon 1 of 3) 299 NM_030226 78921 Mm.200950 NM_030226 ENSMUSG00000030823 9130019O22Rik - RIKEN cDNA 9130019O22 gene protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-23 chr17 26090018 26090228 + 1.14218153353838 NA promoter-TSS (NM_011933) promoter-TSS (NM_011933) 41 NM_011933 26378 Mm.292869 NM_011933 ENSMUSG00000036775 Decr2 - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-8 chr5 136471721 136472032 + 1.14218153353838 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 94105 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-3 chr16 93151566 93151856 + 1.14218153353838 NA Intergenic B2_Mm2|SINE|B2 201478 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-46 chr7 29457420 29457807 + 1.14218153353838 NA intron (NM_001081028, intron 2 of 22) intron (NM_001081028, intron 2 of 22) 47847 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-8 chr13 34707228 34707634 + 1.14218153353838 NA Intergenic Intergenic -32211 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-31 chr2 34543702 34543953 + 1.14218153353838 NA intron (NM_001290625, intron 7 of 11) intron (NM_001290625, intron 7 of 11) 136976 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-2 chr10 43998185 43998451 + 1.14218153353838 NA exon (NM_172393, exon 2 of 20) exon (NM_172393, exon 2 of 20) 6528 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-9 chr11 80210038 80210379 + 1.14218153353838 NA intron (NM_001163355, intron 1 of 19) intron (NM_001163355, intron 1 of 19) 1153 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-30 chr6 34751881 34752087 + 1.14218153353838 NA intron (NM_145575, intron 3 of 11) intron (NM_145575, intron 3 of 11) -28448 NM_001289658 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-4 chr11 78550443 78550644 + 1.14218153353838 NA exon (NM_133706, exon 1 of 3) exon (NM_133706, exon 1 of 3) 192 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-14 chr13 32802972 32803168 + 1.14218153353838 NA intron (NM_030215, intron 1 of 6) CpG 1040 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-28 chr5 134961221 134961483 + 1.14218153353838 NA Intergenic Intergenic -14418 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-3 chr1 89121012 89121223 + 1.14218153353838 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 50702 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-10 chr11 104622039 104622382 + 1.14218153353838 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 14210 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-3 chr2 167773777 167773994 + 1.14218153353838 NA Intergenic Intergenic 82708 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-19 chr19 17014612 17014873 + 1.14218153353838 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 58624 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-3 chr10 59576946 59577251 + 1.14218153353838 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 39594 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-25 chr17 56507496 56507688 + 1.14218153353838 NA Intergenic Intergenic 4891 NM_011483 20834 Mm.76862 NM_011483 ENSMUSG00000044526 Znrf4 1700094M01Rik|Ssrzf1|spzn zinc and ring finger 4 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-41 chr5 91611321 91611583 + 1.14218153353838 NA intron (NM_145562, intron 2 of 3) intron (NM_145562, intron 2 of 3) 93752 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-7 chr17 25569917 25570160 + 1.14218153353838 NA promoter-TSS (NR_045176) promoter-TSS (NR_045176) 648 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding common_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-5 chr19 10059453 10059694 + 1.14218153353838 NA TTS (NM_021890) TTS (NM_021890) 18025 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-10 chr15 38079460 38079839 + 1.14218153353838 NA promoter-TSS (NM_001081359) promoter-TSS (NM_001081359) -795 NM_001081359 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-7 chr2 172468717 172468991 + 1.14218153353838 NA 3' UTR (NM_025542, exon 9 of 9) 3' UTR (NM_025542, exon 9 of 9) -3700 NM_029608 76426 Mm.46148 NM_029608 ENSMUSG00000027505 Fam209 1700029J11Rik family with sequence similarity 209 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-23 chr3 41320748 41320972 + 1.14218153353838 NA Intergenic Intergenic 172339 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-49 chr7 100909556 100909828 + 1.14218153353838 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 22469 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-22 chr16 43253628 43253919 + 1.14218153353838 NA intron (NM_181058, intron 1 of 6) intron (NM_181058, intron 1 of 6) 6489 NM_019778 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288 zinc finger and BTB domain containing 20 protein-coding unique_peak2_12_8_0.262668152586046_3.30125907773534_1.14218153353838-6 chr9 78348569 78348881 + 1.14218153353838 NA Intergenic Intergenic -1580 NM_008182 14858 Mm.422778 NM_008182 ENSMUSG00000057933 Gsta2 Gst2-2|Gstc-2|Gstc2 glutathione S-transferase, alpha 2 (Yc2) protein-coding common_peak1_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-3 chr5 77309103 77309337 + 1.14218153353838 NA exon (NM_019836, exon 1 of 7) exon (NM_019836, exon 1 of 7) 866 NM_019836 56412 Mm.129136 NM_019836 ENSMUSG00000036285 Noa1 2610024G14Rik|AU022345|AtNOS1|mAtNOS1 nitric oxide associated 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-31 chr6 72315244 72315458 + 1.14218153353838 NA TTS (NM_001282071) TTS (NM_001282071) 10741 NM_147779 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-18 chr18 52530153 52530413 + 1.14218153353838 NA promoter-TSS (NM_010728) promoter-TSS (NM_010728) -416 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-10 chr8 3412533 3412876 + 1.14218153353838 NA intron (NM_133962, intron 1 of 19) ORR1G|LTR|ERVL-MaLR 19696 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-48 chr7 82458039 82458298 + 1.14218153353838 NA intron (NM_001190374, intron 6 of 29) intron (NM_001190374, intron 6 of 29) 122474 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-7 chr11 4661179 4661499 + 1.14218153353838 NA intron (NM_029291, intron 8 of 19) intron (NM_029291, intron 8 of 19) 23546 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-4 chr10 80282674 80282952 + 1.14218153353838 NA intron (NM_133188, intron 7 of 11) intron (NM_133188, intron 7 of 11) 4649 NR_105876 102466207 NR_105876 ENSMUSG00000098672 Mir6911 Gm27822|mmu-mir-6911 microRNA 6911 ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-52 chr8 94600034 94600273 + 1.14218153353838 NA intron (NM_028221, intron 1 of 7) intron (NM_028221, intron 1 of 7) 1573 NM_028221 102122 Mm.250425 NM_028221 ENSMUSG00000031774 Fam192a 1700001O11Rik|2310065K24Rik|AI596259|Nip30 family with sequence similarity 192, member A protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-39 chrX 136171436 136171708 + 1.14218153353838 NA intron (NM_001168578, intron 2 of 3) intron (NM_001168578, intron 2 of 3) 679 NM_001168578 66684 Mm.182094 NM_025703 ENSMUSG00000051579 Tceal8 3930402F23Rik transcription elongation factor A (SII)-like 8 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-13 chr16 45889274 45889590 + 1.14218153353838 NA Intergenic Lx4A|LINE|L1 -44681 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-28 chr18 90509535 90509831 + 1.14218153353838 NA promoter-TSS (NM_198295) promoter-TSS (NM_198295) -471 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-22 chr2 173047831 173048044 + 1.14218153353838 NA Intergenic Intergenic 26035 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-16 chr13 75795616 75795866 + 1.14218153353838 NA Intergenic Intergenic -44144 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-55 chr8 126598283 126598471 + 1.14218153353838 NA Intergenic Intergenic -4941 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-12 chr12 35290591 35291023 + 1.14218153353838 NA Intergenic Intergenic -95910 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-27 chr18 53903714 53904016 + 1.14218153353838 NA intron (NM_152809, intron 3 of 12) intron (NM_152809, intron 3 of 12) 41752 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-43 chr5 149509152 149509467 + 1.14218153353838 NA intron (NR_045423, intron 1 of 4) intron (NR_045423, intron 1 of 4) -19370 NM_029440 381693 Mm.136919 NM_029440 ENSMUSG00000029658 Wdr95 4930434E21Rik WD40 repeat domain 95 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-36 chr8 8646744 8647012 + 1.14218153353838 NA intron (NM_010111, intron 1 of 4) intron (NM_010111, intron 1 of 4) 13895 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-2 chr1 183941548 183941807 + 1.14218153353838 NA Intergenic Intergenic 92321 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-9 chr7 24904458 24904654 + 1.14218153353838 NA intron (NM_001130152, intron 1 of 28) intron (NM_001130152, intron 1 of 28) 210 NM_001130152 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_9_11_-0.528210578176238_3.32085721163304_1.14218153353838-25 chr4 107571044 107571305 + 1.14218153353838 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 112415 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-24 chr17 47596445 47596657 + 1.14218153353838 NA intron (NM_001081635, intron 4 of 6) intron (NM_001081635, intron 4 of 6) 3084 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-47 chr7 44952127 44952325 + 1.14218153353838 NA intron (NM_001077591, intron 5 of 10) intron (NM_001077591, intron 5 of 10) 8986 NM_011651 22116 Mm.84502 NM_011651 ENSMUSG00000059891 Tsks Stk22s1|Tssks1 testis-specific serine kinase substrate protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-39 chr5 64176085 64176322 + 1.14218153353838 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) 15943 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-20 chr15 7585752 7585967 + 1.14218153353838 NA Intergenic Intergenic -187464 NM_001289498 268780 Mm.203208 NM_178748 ENSMUSG00000042961 Egflam 5930412K08|AU040377 EGF-like, fibronectin type III and laminin G domains protein-coding unique_peak1_12_8_0.262668152586046_3.30125907773534_1.14218153353838-30 chr19 32340824 32341071 + 1.14218153353838 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 8369 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_98_108_-0.427337717724957_6.55451546591445_1.14147030917448-2 chr6 83914395 83915158 + 1.14147030917448 NA intron (NM_008717, intron 1 of 26) CpG 423 NM_001355284 18139 Mm.132392 NM_008717 ENSMUSG00000030016 Zfp638 AI323587|Np220|Zfml|Znf638|mNP220 zinc finger protein 638 protein-coding common_peak1_98_108_-0.427337717724957_6.55451546591445_1.14147030917448 chr13 47105402 47106896 + 1.14147030917448 NA promoter-TSS (NM_025900) promoter-TSS (NM_025900) 72 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding common_peak2_98_108_-0.427337717724957_6.55451546591445_1.14147030917448 chr12 110484785 110486707 + 1.14147030917448 NA promoter-TSS (NM_012023) promoter-TSS (NM_012023) 7 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak2_50_62_-0.58661346393601_5.68397319153191_1.14143720324845 chr1 165236021 165236883 + 1.14143720324845 NA 5' UTR (NM_001357411, exon 1 of 7) 5' UTR (NM_001357411, exon 1 of 7) 506 NM_145513 226591 Mm.21520 NM_145513 ENSMUSG00000040843 Tiprl 1810011K17Rik TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein-coding common_peak1_75_42_0.535843720269805_5.694186614837_1.14143720324845 chr13 27728920 27730082 + 1.14143720324845 NA Intergenic AmnSINE1|SINE|Deu -12764 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding unique_peak1_75_42_0.535843720269805_5.694186614837_1.14143720324845 chr8 77515867 77516988 + 1.14143720324845 NA promoter-TSS (NR_028125) promoter-TSS (NR_028125) -629 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_74_42_0.516869709677665_5.68469960954093_1.14143720324845 chr1 133953571 133954304 + 1.14143720324845 NA Intergenic Intergenic -32536 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak1_50_62_-0.58661346393601_5.68397319153191_1.14143720324845 chr2 73892017 73892593 + 1.14143720324845 NA intron (NM_001025093, intron 1 of 14) CpG 334 NM_001284371 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak2_74_42_0.516869709677665_5.68469960954093_1.14143720324845-2 chr5 20702343 20702858 + 1.14143720324845 NA 3' UTR (NM_001170745, exon 21 of 21) 3' UTR (NM_001170745, exon 21 of 21) 179524 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak2_133_140_-0.36505331433165_6.95702469523297_1.14127475963825 chr4 133864044 133865795 + 1.14127475963825 NA intron (NM_009097, intron 11 of 21) intron (NM_009097, intron 11 of 21) 9812 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_171_109_0.350772857538284_6.9567461422938_1.14127475963825 chr19 9982755 9983773 + 1.14127475963825 NA intron (NR_073181, intron 2 of 4) intron (NR_073181, intron 2 of 4) 618 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_205_206_-0.302954572014342_7.54200967149215_1.14087587700385 chr8 84984906 84986280 + 1.14087587700385 NA Intergenic Intergenic -5002 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_204_133_0.317472296323301_7.22482533861942_1.13957120922849 chr5 125177268 125178969 + 1.13957120922849 NA intron (NM_001253905, intron 1 of 42) CpG 1096 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_62_74_-0.535448392249046_5.96109449437136_1.1394418936145 chr2 6129249 6130243 + 1.1394418936145 NA intron (NM_144883, intron 1 of 3) CpG 439 NM_144883 227545 Mm.133542 NM_144883 ENSMUSG00000045319 Proser2 5430407P10Rik|AU067770 proline and serine rich 2 protein-coding common_peak1_62_74_-0.535448392249046_5.96109449437136_1.1394418936145 chr19 28289582 28290227 + 1.1394418936145 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -278738 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_62_74_-0.535448392249046_5.96109449437136_1.1394418936145-2 chr9 67106196 67107142 + 1.1394418936145 NA intron (NR_153957, intron 2 of 2) Charlie4a|DNA|hAT-Charlie 4369 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak2_62_74_-0.535448392249046_5.96109449437136_1.1394418936145-2 chr2 126362589 126363456 + 1.1394418936145 NA intron (NM_001359975, intron 20 of 27) intron (NM_001359975, intron 20 of 27) 128531 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_89_52_0.47639271329014_5.96611681120827_1.13944189361449-2 chr15 62330462 62331613 + 1.13944189361449 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -111586 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_89_52_0.47639271329014_5.96611681120827_1.13944189361449 chr10 116957058 116957786 + 1.13944189361449 NA intron (NR_038026, intron 2 of 2) RLTR25A|LTR|ERVK 6860 NR_038026 71086 Mm.214134 NR_038025 ENSMUSG00000112627 4933412E12Rik - RIKEN cDNA 4933412E12 gene ncRNA common_peak1_89_52_0.47639271329014_5.96611681120827_1.13944189361449-3 chr6 122819496 122820437 + 1.13944189361449 NA promoter-TSS (NM_021899) promoter-TSS (NM_021899) -218 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding unique_peak1_89_52_0.47639271329014_5.96611681120827_1.13944189361449 chr1 34236639 34237475 + 1.13944189361449 NA intron (NM_001276764, intron 60 of 102) intron (NM_001276764, intron 60 of 102) 76727 NM_010081 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak1_193_125_0.327275651337917_7.14091774916888_1.13852888000236 chr5 36694581 36697085 + 1.13852888000236 NA intron (NM_001081232, intron 1 of 8) CpG 188 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_105_63_0.438715075696616_6.21935753784831_1.13847008030447 chr11 22512243 22513142 + 1.13847008030447 NA intron (NM_153596, intron 1 of 3) CpG 409 NM_153596 103765 Mm.221274 NM_153596 ENSMUSG00000049904 Tmem17 AI503894|AW049890 transmembrane protein 17 protein-coding common_peak2_105_63_0.438715075696616_6.21935753784831_1.13847008030447 chr2 25254750 25255759 + 1.13847008030447 NA promoter-TSS (NM_177344) promoter-TSS (NM_177344) 160 NM_001252541 78797 Mm.40020 NM_178239 ENSMUSG00000006471 Ndor1 4930447P04Rik|NR1|Ndor|Tg(UBC-cre/ERT2)1Ejb|Ubc-cre NADPH dependent diflavin oxidoreductase 1 protein-coding common_peak2_76_87_-0.478597166466108_6.22013303540424_1.13847008030447 chr1 64956035 64957192 + 1.13847008030447 NA intron (NM_001039493, intron 1 of 7) CpG 211 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_82_47_0.503361120169762_5.83664306080604_1.13843324335928 chr15 101976587 101977377 + 1.13843324335928 NA Intergenic Intergenic -22695 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak2_82_47_0.503361120169762_5.83664306080604_1.13843324335928-2 chr3 9523570 9524519 + 1.13843324335928 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 86041 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak2_56_68_-0.558525400005568_5.82926175677539_1.13843324335928 chr19 60581235 60581643 + 1.13843324335928 NA promoter-TSS (NM_001172096) promoter-TSS (NM_001172096) -416 NM_001172096 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding common_peak2_82_47_0.503361120169762_5.83664306080604_1.13843324335928 chr18 20895710 20896413 + 1.13843324335928 NA promoter-TSS (NM_029491) promoter-TSS (NM_029491) 17 NM_029491 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971-3 chr2 69585295 69585895 + 1.13829382151971 NA intron (NM_001081088, intron 1 of 78) CpG 472 NM_001081088 14725 Mm.23847 NM_001081088 ENSMUSG00000027070 Lrp2 AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo low density lipoprotein receptor-related protein 2 protein-coding common_peak1_44_22_0.687806191369571_4.8674650517418_1.13829382151971-4 chr5 104508372 104508802 + 1.13829382151971 NA intron (NM_001166581, intron 1 of 1) CpG 235 NM_001166581 100042165 Mm.482189 NM_001166581 ENSMUSG00000079065 BC005561 - cDNA sequence BC005561 protein-coding unique_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971 chr14 20793798 20794632 + 1.13829382151971 NA promoter-TSS (NM_001039138) promoter-TSS (NM_001039138) -24 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA common_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971 chr10 4334597 4335185 + 1.13829382151971 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 52584 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak1_44_22_0.687806191369571_4.8674650517418_1.13829382151971 chr14 76537266 76538057 + 1.13829382151971 NA intron (NM_001360048, intron 2 of 2) intron (NM_001360048, intron 2 of 2) -16806 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971-4 chr8 26805788 26806143 + 1.13829382151971 NA Intergenic Intergenic 18458 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_44_22_0.687806191369571_4.8674650517418_1.13829382151971-3 chr2 25332770 25333256 + 1.13829382151971 NA promoter-TSS (NR_027448) promoter-TSS (NR_027448) 270 NM_001029983 227619 Mm.270798 NM_001029983 ENSMUSG00000036646 Man1b1 E430019H13Rik|ERMan1|Gm108|MANA-ER mannosidase, alpha, class 1B, member 1 protein-coding unique_peak1_44_22_0.687806191369571_4.8674650517418_1.13829382151971 chr11 79071879 79072629 + 1.13829382151971 NA intron (NM_013571, intron 2 of 17) intron (NM_013571, intron 2 of 17) -12418 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971-2 chr11 113062652 113063135 + 1.13829382151971 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 138945 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971-3 chr8 126970759 126971105 + 1.13829382151971 NA intron (NM_172762, intron 1 of 10) CpG 147 NM_172762 52202 Mm.28199 NM_172762 ENSMUSG00000033931 Rbm34 4930547K05Rik|6330444B11|D8Ertd233e RNA binding motif protein 34 protein-coding common_peak1_44_22_0.687806191369571_4.8674650517418_1.13829382151971-5 chr6 34867220 34867673 + 1.13829382151971 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 4300 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak2_44_22_0.687806191369571_4.8674650517418_1.13829382151971 chr17 26497814 26498260 + 1.13829382151971 NA Intergenic Intergenic 10435 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_44_22_0.687806191369571_4.8674650517418_1.13829382151971-2 chr17 88529500 88529953 + 1.13829382151971 NA promoter-TSS (NM_028658) promoter-TSS (NM_028658) -398 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding unique_peak2_26_37_-0.768325682970183_4.86376467195849_1.13829382151971-2 chr15 79299294 79299725 + 1.13829382151971 NA intron (NM_016915, intron 9 of 15) intron (NM_016915, intron 9 of 15) -14000 NM_177580 207495 Mm.309647 NM_177580 ENSMUSG00000018126 Baiap2l2 BC048937 BAI1-associated protein 2-like 2 protein-coding common_peak1_107_116_-0.40487284825649_6.66792829545516_1.13819685577021 chr2 90917216 90918210 + 1.13819685577021 NA exon (NM_025576, exon 1 of 5) exon (NM_025576, exon 1 of 5) 337 NM_025576 66461 Mm.23926 NM_025576 Ptpmt1 1110001D10Rik|2810004N20Rik|PLIP protein tyrosine phosphatase, mitochondrial 1 protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-6 chr4 74251266 74251722 + 1.1381569562463 NA promoter-TSS (NM_144787) promoter-TSS (NM_144787) -385 NM_144787 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463 chr1 155054091 155054443 + 1.1381569562463 NA Intergenic Intergenic 28997 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_29_13_0.823177623141525_4.21894373362837_1.1381569562463-4 chr5 72863728 72863932 + 1.1381569562463 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 4618 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak2_29_13_0.823177623141525_4.21894373362837_1.1381569562463-2 chr12 13269156 13269434 + 1.1381569562463 NA intron (NM_027706, intron 1 of 51) intron (NM_027706, intron 1 of 51) 168 NM_027706 71169 Mm.177520 NM_027706 ENSMUSG00000020576 Nbas 4933425L03Rik|Nag neuroblastoma amplified sequence protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-10 chr6 135026481 135026980 + 1.1381569562463 NA Intergenic Intergenic 15118 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-5 chr12 16847932 16848403 + 1.1381569562463 NA Intergenic Intergenic 37202 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-16 chr9 65399106 65399594 + 1.1381569562463 NA intron (NM_001162923, intron 1 of 4) intron (NM_001162923, intron 1 of 4) 862 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-7 chr2 127269633 127270050 + 1.1381569562463 NA promoter-TSS (NM_139308) promoter-TSS (NM_139308) -388 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-14 chr8 34284271 34284691 + 1.1381569562463 NA Intergenic Intergenic -117769 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-2 chr11 106159682 106159998 + 1.1381569562463 NA promoter-TSS (NM_001356459) promoter-TSS (NM_001356459) 87 NM_001356459 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding common_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-3 chr14 25694208 25694740 + 1.1381569562463 NA intron (NM_134084, intron 1 of 5) intron (NM_134084, intron 1 of 5) 304 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-3 chr16 16214575 16215064 + 1.1381569562463 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 1474 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-4 chr11 74560478 74560900 + 1.1381569562463 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 29469 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-4 chr19 24674253 24674690 + 1.1381569562463 NA intron (NM_183160, intron 1 of 1) intron (NM_183160, intron 1 of 1) 463 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-9 chr6 89353616 89353963 + 1.1381569562463 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 8824 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-10 chr8 126474674 126475020 + 1.1381569562463 NA exon (NM_001159907, exon 1 of 30) exon (NM_001159907, exon 1 of 30) 218 NM_001159907 212728 Mm.482479 NM_001159907 ENSMUSG00000090290 Tarbp1 Gm17296|Gm179 TAR RNA binding protein 1 protein-coding common_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-2 chr16 91968796 91969370 + 1.1381569562463 NA Intergenic Intergenic -37453 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-2 chr1 192658416 192658754 + 1.1381569562463 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 112634 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-4 chr7 139280838 139281121 + 1.1381569562463 NA Intergenic Intergenic 32497 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-8 chr3 94565080 94565407 + 1.1381569562463 NA intron (NM_001082484, intron 1 of 11) B1_Mur1|SINE|Alu 17473 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding common_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-5 chr3 98111164 98111453 + 1.1381569562463 NA intron (NM_010928, intron 12 of 33) intron (NM_010928, intron 12 of 33) -49326 NM_027665 71078 Mm.50711 NM_027665 ENSMUSG00000043468 Adam30 4933424D07Rik|svph4 a disintegrin and metallopeptidase domain 30 protein-coding common_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463 chr11 60351879 60352181 + 1.1381569562463 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 875 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-12 chr7 98165243 98165562 + 1.1381569562463 NA intron (NM_007602, intron 1 of 12) intron (NM_007602, intron 1 of 12) -3060 NM_001301250 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-9 chr8 109917669 109918025 + 1.1381569562463 NA intron (NM_001122594, intron 9 of 18) intron (NM_001122594, intron 9 of 18) 44358 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-6 chr2 102946093 102946488 + 1.1381569562463 NA Intergenic Intergenic -44625 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_15_25_-0.970399673923296_4.21523988117944_1.1381569562463 chr13 111490369 111490624 + 1.1381569562463 NA promoter-TSS (NM_001122963) promoter-TSS (NM_001122963) -369 NM_001361924 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-3 chr19 4455937 4456221 + 1.1381569562463 NA intron (NM_134164, intron 4 of 7) intron (NM_134164, intron 4 of 7) 16520 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463 chr11 116131471 116131822 + 1.1381569562463 NA promoter-TSS (NM_178802) promoter-TSS (NM_178802) -518 NM_178802 338364 Mm.439976 NM_178802 ENSMUSG00000054517 Trim65 4732463G12Rik tripartite motif-containing 65 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-15 chr9 63942283 63942774 + 1.1381569562463 NA Intergenic Intergenic 79531 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_29_13_0.823177623141525_4.21894373362837_1.1381569562463 chr10 62651761 62652018 + 1.1381569562463 NA promoter-TSS (NM_053183) promoter-TSS (NM_053183) -671 NM_053183 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-7 chr4 136521957 136522314 + 1.1381569562463 NA intron (NM_024452, intron 2 of 4) intron (NM_024452, intron 2 of 4) 52374 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak1_15_25_-0.970399673923296_4.21523988117944_1.1381569562463 chr13 77135031 77135295 + 1.1381569562463 NA promoter-TSS (NM_001145676) promoter-TSS (NM_001145676) 305 NM_134071 105377 Mm.209730 NM_134071 ENSMUSG00000021597 Slf1 2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik SMC5-SMC6 complex localization factor 1 protein-coding common_peak1_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-2 chr9 110305189 110305410 + 1.1381569562463 NA exon (NM_001081381, exon 1 of 7) exon (NM_001081381, exon 1 of 7) 107 NM_001081381 72341 Mm.374250 NM_001081381 ENSMUSG00000054836 Elp6 2610001P13Rik|2610002I17Rik|AV159994|Tmem103 elongator acetyltransferase complex subunit 6 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-3 chr10 127521922 127522335 + 1.1381569562463 NA intron (NM_028230, intron 1 of 11) intron (NM_028230, intron 1 of 11) 316 NM_001252316 108037 Mm.29890 NM_028230 ENSMUSG00000025403 Shmt2 2700043D08Rik|AA408223|AA986903|SHMT serine hydroxymethyltransferase 2 (mitochondrial) protein-coding common_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-4 chr19 59862820 59863065 + 1.1381569562463 NA Intergenic Intergenic 80422 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-13 chr7 126487519 126487813 + 1.1381569562463 NA exon (NM_001163713, exon 2 of 9) exon (NM_001163713, exon 2 of 9) 311 NM_001163713 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-8 chr7 135715698 135716206 + 1.1381569562463 NA intron (NM_001081117, intron 1 of 13) CpG 427 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding unique_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-5 chr2 62646080 62646444 + 1.1381569562463 NA promoter-TSS (NM_027835) promoter-TSS (NM_027835) -7 NM_001164477 71586 Mm.136224 NM_027835 ENSMUSG00000026896 Ifih1 9130009C22Rik|Helicard|Hlcd|MDA5|RLR-2 interferon induced with helicase C domain 1 protein-coding common_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-2 chr12 17184513 17184736 + 1.1381569562463 NA Intergenic Intergenic -7736 NM_201531 382571 Mm.40173 NM_201531 ENSMUSG00000051726 Kcnf1 Gm1182|Kv5.1 potassium voltage-gated channel, subfamily F, member 1 protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-11 chr7 30559199 30559518 + 1.1381569562463 NA intron (NM_001290569, intron 1 of 8) intron (NM_001290569, intron 1 of 8) 288 NM_029377 75660 Mm.379242 NM_029377 ENSMUSG00000036845 Lin37 1810054G18Rik lin-37 homolog (C. elegans) protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-17 chr9 71628455 71629020 + 1.1381569562463 NA 3' UTR (NM_026599, exon 19 of 19) 3' UTR (NM_026599, exon 19 of 19) -36377 NM_001033208 102371 Mm.27585 NM_001033208 ENSMUSG00000041361 Myzap AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap myocardial zonula adherens protein protein-coding unique_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463 chr1 151237842 151238504 + 1.1381569562463 NA Intergenic Intergenic 100139 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_29_13_0.823177623141525_4.21894373362837_1.1381569562463-6 chr4 134759167 134759591 + 1.1381569562463 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 8625 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_29_13_0.823177623141525_4.21894373362837_1.1381569562463-3 chr15 76201839 76202108 + 1.1381569562463 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) -1366 NM_201390 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_15_25_-0.970399673923296_4.21523988117944_1.1381569562463-5 chr9 3404228 3404500 + 1.1381569562463 NA intron (NM_027545, intron 1 of 17) intron (NM_027545, intron 1 of 17) 279 NM_027545 244672 Mm.245482 NM_027545 ENSMUSG00000025898 Cwf19l2 3230401L03Rik|9030209E10 CWF19-like 2, cell cycle control (S. pombe) protein-coding common_peak2_90_101_-0.452283097515497_6.44628379321375_1.13813320365872 chr2 18057082 18058018 + 1.13813320365872 NA promoter-TSS (NR_106115) promoter-TSS (NR_106115) -296 NR_106115 102466840 NR_106115 ENSMUSG00000099050 Mir7655 Gm27794|mmu-mir-7655 microRNA 7655 ncRNA common_peak1_122_75_0.403867656384308_6.44986134163574_1.13813320365872 chr14 25474824 25476077 + 1.13813320365872 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 16265 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_122_75_0.403867656384308_6.44986134163574_1.13813320365872-2 chr19 59465030 59466265 + 1.13813320365872 NA TTS (NM_010132) TTS (NM_010132) 6957 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak1_230_228_-0.284588713271544_7.69690943146117_1.13750342883059 chr5 142903966 142906600 + 1.13750342883059 NA exon (NM_007393, exon 3 of 6) exon (NM_007393, exon 3 of 6) 1471 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_115_124_-0.397926242858065_6.76682116323305_1.13736935864757 chr18 67723438 67724584 + 1.13736935864757 NA intron (NM_008977, intron 1 of 9) CpG 610 NM_001127177 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak1_114_69_0.426172204031922_6.34236911896093_1.13694527029009 chr15 80254312 80255006 + 1.13694527029009 NA promoter-TSS (NM_001287180) promoter-TSS (NM_001287180) -525 NM_001287180 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak1_295_199_0.265939612562984_7.77682599605622_1.13373392217744 chr7 144468653 144471030 + 1.13373392217744 NA intron (NM_001357116, intron 1 of 15) intron (NM_001357116, intron 1 of 15) 1094 NM_007803 13043 Mm.205601 NM_007803 ENSMUSG00000031078 Cttn 1110020L01Rik|Ems1 cortactin protein-coding common_peak1_143_150_-0.360803449798862_7.05800301442565_1.13270975437052 chr18 36403579 36404766 + 1.13270975437052 NA 3' UTR (NM_026027, exon 4 of 4) 3' UTR (NM_026027, exon 4 of 4) 50323 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_99_109_-0.426115830945596_6.56830179805186_1.1326101941611 chr7 24884133 24885145 + 1.1326101941611 NA promoter-TSS (NM_001360119) promoter-TSS (NM_001360119) -37 NM_001360116 20085 Mm.300281 NM_023133 ENSMUSG00000040952 Rps19 Dsk3 ribosomal protein S19 protein-coding common_peak1_45_57_-0.615127693331317_5.55041714846191_1.13178052607246 chr11 117963794 117964488 + 1.13178052607246 NA Intergenic Intergenic 5225 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_68_38_0.53828668516146_5.55454556144298_1.13178052607246 chr1 172219764 172220857 + 1.13178052607246 NA promoter-TSS (NM_009813) promoter-TSS (NM_009813) -415 NM_009813 12372 Mm.12829 NM_009813 ENSMUSG00000007122 Casq1 CSQ|CSQ-1|CSQ1|sCSQ calsequestrin 1 protein-coding common_peak1_68_38_0.53828668516146_5.55454556144298_1.13178052607246-3 chr2 72303626 72304786 + 1.13178052607246 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 18505 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_45_57_-0.615127693331317_5.55041714846191_1.13178052607246-2 chr16 45158811 45159826 + 1.13178052607246 NA promoter-TSS (NM_001356453) promoter-TSS (NM_001356453) 489 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding common_peak1_45_57_-0.615127693331317_5.55041714846191_1.13178052607246-2 chr11 120350349 120351191 + 1.13178052607246 NA non-coding (NR_038126, exon 2 of 2) non-coding (NR_038126, exon 2 of 2) 2092 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak1_69_38_0.55889879411031_5.5648516159174_1.13178052607246 chr11 106659916 106660919 + 1.13178052607246 NA intron (NM_001032378, intron 13 of 13) B1_Mur4|SINE|Alu -47487 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak1_45_57_-0.615127693331317_5.55041714846191_1.13178052607246-3 chr4 88782070 88782496 + 1.13178052607246 NA 5' UTR (NM_197889, exon 1 of 1) 5' UTR (NM_197889, exon 1 of 1) 152 NM_197889 319146 Mm.368232 NM_197889 ENSMUSG00000096854 Ifnz 6030405N23Rik|BGIF|Lmtn interferon zeta protein-coding common_peak2_45_57_-0.615127693331317_5.55041714846191_1.13178052607246 chr1 39761360 39762038 + 1.13178052607246 NA Intergenic Intergenic -40710 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding common_peak1_68_38_0.53828668516146_5.55454556144298_1.13178052607246-4 chr6 146957226 146958229 + 1.13178052607246 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -3306 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_69_38_0.55889879411031_5.5648516159174_1.13178052607246-2 chr3 108384028 108384599 + 1.13178052607246 NA promoter-TSS (NR_040560) promoter-TSS (NR_040560) 475 NM_019976 56742 Mm.389499 NM_019976 ENSMUSG00000068744 Psrc1 5430413I02Rik|AL033312|Dda3 proline/serine-rich coiled-coil 1 protein-coding common_peak2_69_38_0.55889879411031_5.5648516159174_1.13178052607246 chr1 106759058 106759649 + 1.13178052607246 NA intron (NM_027534, intron 1 of 9) CpG 389 NM_027534 70750 Mm.458911 NM_027534 ENSMUSG00000009905 Kdsr 6330410P18Rik|9430079B08Rik|Fvt1 3-ketodihydrosphingosine reductase protein-coding common_peak2_69_38_0.55889879411031_5.5648516159174_1.13178052607246-3 chr7 110797831 110798521 + 1.13178052607246 NA intron (NM_009667, intron 6 of 14) intron (NM_009667, intron 6 of 14) 25572 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_68_38_0.53828668516146_5.55454556144298_1.13178052607246-2 chr10 40882642 40883132 + 1.13178052607246 NA promoter-TSS (NM_031877) promoter-TSS (NM_031877) 256 NM_027879 71713 Mm.46063 NM_027879 ENSMUSG00000038446 Cdc40 1200003H23Rik|EHB3|PRP17 cell division cycle 40 protein-coding common_peak1_218_143_0.308271056777825_7.32406052983122_1.1313569703249 chr1 39575081 39577325 + 1.1313569703249 NA intron (NM_001033135, intron 1 of 6) intron (NM_001033135, intron 1 of 6) 1144 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4 ring finger protein 149 protein-coding common_peak2_98_58_0.458203557690127_6.11174482820691_1.13125231345915 chr1 162242296 162243336 + 1.13125231345915 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 19448 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA common_peak1_98_58_0.458203557690127_6.11174482820691_1.13125231345915-2 chr8 83899978 83900923 + 1.13125231345915 NA 5' UTR (NM_181039, exon 1 of 23) 5' UTR (NM_181039, exon 1 of 23) 352 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding common_peak1_98_58_0.458203557690127_6.11174482820691_1.13125231345915 chr4 129058187 129059117 + 1.13125231345915 NA exon (NM_029219, exon 1 of 9) exon (NM_029219, exon 1 of 9) 381 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak1_401_278_0.224157348892167_8.23619998627527_1.13022733691836 chr4 116074671 116077787 + 1.13022733691836 NA intron (NM_153521, intron 1 of 9) CpG 960 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding common_peak1_142_89_0.375765456931458_6.6797358247954_1.13001812209661 chr9 107871724 107873111 + 1.13001812209661 NA intron (NM_029169, intron 1 of 20) CpG 402 NM_011251 19654 Mm.139926 NM_011251 ENSMUSG00000032582 Rbm6 4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015 RNA binding motif protein 6 protein-coding common_peak1_152_96_0.36453424003099_6.78217996220262_1.12975655080001 chr4 137993378 137995058 + 1.12975655080001 NA intron (NM_001256195, intron 2 of 34) CpG-10542 762 NM_172703 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak2_117_125_-0.384933817750482_6.78481301462468_1.12975655080001 chr13 48545988 48546527 + 1.12975655080001 NA Intergenic CpG -7985 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-6 chr3 139075433 139075805 + 1.12969433525548 NA promoter-TSS (NM_001040690) promoter-TSS (NM_001040690) -418 NM_001356388 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding unique_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548 chr11 20531928 20532431 + 1.12969433525548 NA Intergenic CpG -11074 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak2_22_33_-0.83755455988084_4.66868556130992_1.12969433525548 chr15 56722586 56723041 + 1.12969433525548 NA Intergenic Intergenic -28267 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-4 chr2 25054476 25054766 + 1.12969433525548 NA TTS (NM_146251) TTS (NM_146251) 242 NM_001177655 56876 Mm.42956 NM_020276 ENSMUSG00000006476 Nsmf Jacob|Nelf NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding unique_peak2_22_33_-0.83755455988084_4.66868556130992_1.12969433525548-3 chr7 141480184 141480807 + 1.12969433525548 NA intron (NM_001252588, intron 1 of 7) intron (NM_001252588, intron 1 of 7) 4115 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-5 chr2 32534502 32534978 + 1.12969433525548 NA promoter-TSS (NM_153560) promoter-TSS (NM_153560) -619 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_22_33_-0.83755455988084_4.66868556130992_1.12969433525548 chr2 51140029 51140458 + 1.12969433525548 NA intron (NM_028810, intron 2 of 4) intron (NM_028810, intron 2 of 4) 8868 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548 chr11 4135228 4135473 + 1.12969433525548 NA exon (NM_027859, exon 1 of 9) exon (NM_027859, exon 1 of 9) 190 NM_027859 71673 Mm.240586 NM_027859 ENSMUSG00000003581 Rnf215 0610009J22Rik|AW557025|C77903 ring finger protein 215 protein-coding common_peak2_39_19_0.720713868511067_4.6822850291429_1.12969433525548-2 chr12 111377865 111378118 + 1.12969433525548 NA promoter-TSS (NM_183016) promoter-TSS (NM_183016) -273 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding common_peak1_22_33_-0.83755455988084_4.66868556130992_1.12969433525548 chr15 97182715 97183051 + 1.12969433525548 NA Intergenic Intergenic -15639 NR_155279 102635594 Mm.392594 NR_155278 ENSMUSG00000116295 Gm32885 - predicted gene, 32885 ncRNA common_peak2_39_19_0.720713868511067_4.6822850291429_1.12969433525548 chr10 24493853 24494129 + 1.12969433525548 NA Intergenic Intergenic -101451 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-2 chr15 10981764 10982020 + 1.12969433525548 NA exon (NM_008537, exon 1 of 5) exon (NM_008537, exon 1 of 5) 136 NM_008537 17117 Mm.2787 NM_008537 ENSMUSG00000022244 Amacr Macr1 alpha-methylacyl-CoA racemase protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-7 chr4 89311311 89311893 + 1.12969433525548 NA promoter-TSS (NM_007670) promoter-TSS (NM_007670) -570 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_22_33_-0.83755455988084_4.66868556130992_1.12969433525548-2 chr19 41248016 41248428 + 1.12969433525548 NA intron (NM_133352, intron 2 of 14) intron (NM_133352, intron 2 of 14) 15782 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak2_39_19_0.720713868511067_4.6822850291429_1.12969433525548-4 chr6 113099987 113100469 + 1.12969433525548 NA intron (NM_028385, intron 1 of 21) intron (NM_028385, intron 1 of 21) -4707 NM_173005 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-3 chr15 70617905 70618433 + 1.12969433525548 NA Intergenic Intergenic 693936 NR_045071 100503580 Mm.404646 NR_045071 ENSMUSG00000116483 Gm19782 - predicted gene, 19782 ncRNA common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-8 chr5 114718677 114719104 + 1.12969433525548 NA promoter-TSS (NR_105995) promoter-TSS (NR_105995) -625 NR_105995 102465622 NR_105995 ENSMUSG00000098656 Mir7028 Gm27674|mmu-mir-7028 microRNA 7028 ncRNA common_peak2_39_19_0.720713868511067_4.6822850291429_1.12969433525548-3 chr12 112596307 112596547 + 1.12969433525548 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 7643 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak2_22_33_-0.83755455988084_4.66868556130992_1.12969433525548-4 chr8 8605918 8606313 + 1.12969433525548 NA Intergenic Intergenic 54658 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak1_39_19_0.720713868511067_4.6822850291429_1.12969433525548-9 chr8 70682456 70682910 + 1.12969433525548 NA Intergenic Intergenic 9452 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-7 chr13 98638197 98638404 + 1.12966497611638 NA promoter-TSS (NM_026685) promoter-TSS (NM_026685) -890 NM_026685 68344 Mm.28766 NM_026685 ENSMUSG00000046082 Tmem174 0610009B10Rik|AA986094 transmembrane protein 174 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-39 chr7 78895384 78895663 + 1.12966497611638 NA promoter-TSS (NM_001162939) promoter-TSS (NM_001162939) -404 NM_026531 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-35 chr4 109205461 109205687 + 1.12966497611638 NA Intergenic Intergenic -3302 NM_001346502 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding unique_peak1_7_10_-0.722336594846257_3.09826332121417_1.12966497611638 chr2 158156062 158156311 + 1.12966497611638 NA Intergenic Intergenic -9794 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-28 chr7 145114541 145114819 + 1.12966497611638 NA Intergenic Intergenic 93439 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-5 chr10 96557641 96557853 + 1.12966497611638 NA Intergenic Intergenic -59254 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-17 chr15 63652388 63652641 + 1.12966497611638 NA Intergenic Intergenic 156225 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding unique_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-5 chr5 32163833 32164040 + 1.12966497611638 NA Intergenic Intergenic 27464 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-10 chr12 77955615 77955857 + 1.12966497611638 NA Intergenic Intergenic -270919 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-41 chr8 92875894 92876098 + 1.12966497611638 NA intron (NM_001357375, intron 6 of 12) intron (NM_001357375, intron 6 of 12) 20663 NM_001357374 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-34 chr4 64017980 64018266 + 1.12966497611638 NA exon (NM_011607, exon 3 of 26) exon (NM_011607, exon 3 of 26) 28892 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-27 chr2 148478851 148479210 + 1.12966497611638 NA Intergenic B3|SINE|B2 -35495 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-26 chr3 32615026 32615219 + 1.12966497611638 NA intron (NM_001348104, intron 1 of 10) intron (NM_001348104, intron 1 of 10) 1045 NM_001348062 14696 Mm.139192 NM_013531 ENSMUSG00000027669 Gnb4 6720453A21Rik|G(beta)4 guanine nucleotide binding protein (G protein), beta 4 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-16 chr17 72925265 72925453 + 1.12966497611638 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 7054 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-22 chr4 70534496 70534713 + 1.12966497611638 NA exon (NM_172694, exon 1 of 6) exon (NM_172694, exon 1 of 6) 324 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638 chr1 20416530 20416746 + 1.12966497611638 NA intron (NM_153179, intron 36 of 66) intron (NM_153179, intron 36 of 66) 60184 NR_045734 75028 Mm.417820 NR_045734 ENSMUSG00000089914 4930486I03Rik - RIKEN cDNA 4930486I03 gene ncRNA unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-13 chr13 84023549 84023776 + 1.12966497611638 NA Intergenic Intergenic 41112 NR_131220 553095 Mm.39702 NR_131220 ENSMUSG00000098087 Gm17750 - predicted gene, 17750 ncRNA unique_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638 chr10 83144956 83145194 + 1.12966497611638 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 159578 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-5 chr8 47983380 47983611 + 1.12966497611638 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 7056 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-13 chr9 59353119 59353320 + 1.12966497611638 NA intron (NR_153195, intron 1 of 15) CpG 289 NM_001359558 102774 Mm.200714 NM_175325 ENSMUSG00000025235 Bbs4 AW537059|AW742241|D9Ertd464e Bardet-Biedl syndrome 4 (human) protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-42 chr9 21724492 21724681 + 1.12966497611638 NA intron (NM_001252659, intron 1 of 17) intron (NM_001252659, intron 1 of 17) 1010 NM_010700 16835 Mm.3213 NM_010700 ENSMUSG00000032193 Ldlr Hlb301 low density lipoprotein receptor protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-27 chr7 142459136 142459437 + 1.12966497611638 NA Intergenic Intergenic -1526 NM_001271510 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-3 chr2 37703701 37703902 + 1.12966497611638 NA Intergenic CpG -15517 NR_039590 100628597 NR_039590 ENSMUSG00000092958 Mir5128 mir-5128|mmu-mir-5128|mu-mir-5128 microRNA 5128 ncRNA common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-7 chr7 64192553 64192789 + 1.12966497611638 NA intron (NM_018752, intron 1 of 13) intron (NM_018752, intron 1 of 13) 7212 NM_018752 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-4 chrX 73464479 73464693 + 1.12966497611638 NA Intergenic Intergenic -5557 NM_207104 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-6 chr11 87422121 87422326 + 1.12966497611638 NA intron (NM_031386, intron 1 of 30) intron (NM_031386, intron 1 of 30) -5368 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-12 chr13 23752468 23752678 + 1.12966497611638 NA TTS (NM_175660) TTS (NM_175660) 193 NM_178203 319150 NM_178203 ENSMUSG00000069267 Hist1h3b H3-53 histone cluster 1, H3b protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-21 chr3 126045873 126046101 + 1.12966497611638 NA Intergenic MLT1F2|LTR|ERVL-MaLR -107335 NR_149311 22239 Mm.306021 NM_011674 ENSMUSG00000032854 Ugt8a AI850488|AW455908|Cgt|Ugt8|mCerGT UDP galactosyltransferase 8A protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-34 chr5 98560554 98560810 + 1.12966497611638 NA intron (NM_001024614, intron 3 of 5) intron (NM_001024614, intron 3 of 5) -85018 NR_030484 735265 NR_030484 ENSMUSG00000105814 Mir703 Mirn703|mir-703|mmu-mir-703 microRNA 703 ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-6 chr13 47171058 47171297 + 1.12966497611638 NA intron (NM_146042, intron 1 of 7) intron (NM_146042, intron 1 of 7) -22507 NR_126083 319467 Mm.447279 NR_126083 ENSMUSG00000114961 A930002C04Rik - RIKEN cDNA A930002C04 gene ncRNA unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-23 chr2 167659755 167660015 + 1.12966497611638 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 1659 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-5 chr13 28632415 28632637 + 1.12966497611638 NA intron (NR_045054, intron 5 of 7) intron (NR_045054, intron 5 of 7) 78347 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-7 chr5 21053885 21054110 + 1.12966497611638 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 1914 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding unique_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-2 chr12 75546011 75546224 + 1.12966497611638 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 50083 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-40 chr8 92358603 92358805 + 1.12966497611638 NA intron (NM_018826, intron 1 of 2) CpG 908 NM_018826 54352 Mm.101153 NM_018826 ENSMUSG00000031737 Irx5 - Iroquois homeobox 5 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-9 chr15 100205694 100205961 + 1.12966497611638 NA intron (NM_172819, intron 28 of 32) intron (NM_172819, intron 28 of 32) -17791 NR_037311 100499528 NR_037311 ENSMUSG00000092752 Mir3473a Mir3473|mir-3473a|mmu-mir-3473|mmu-mir-3473a microRNA 3473a ncRNA common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-10 chr7 4445460 4445682 + 1.12966497611638 NA promoter-TSS (NM_001290409) promoter-TSS (NM_001290409) 86 NM_175372 108841 Mm.413106 NM_175372 ENSMUSG00000008435 Rdh13 8430425D21Rik retinol dehydrogenase 13 (all-trans and 9-cis) protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-6 chr10 19128073 19128302 + 1.12966497611638 NA Intergenic Intergenic -13562 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-26 chr7 19816051 19816252 + 1.12966497611638 NA intron (NM_033601, intron 2 of 8) intron (NM_033601, intron 2 of 8) 6604 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-39 chr8 64540775 64541020 + 1.12966497611638 NA Intergenic Intergenic -26456 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-8 chr10 127380169 127380410 + 1.12966497611638 NA promoter-TSS (NM_001359244) promoter-TSS (NM_001359244) -379 NM_001359244 71750 Mm.29342 NM_027900 ENSMUSG00000025404 R3hdm2 1300003K24Rik|AU041262|mKIAA1002 R3H domain containing 2 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-43 chr9 6433152 6433464 + 1.12966497611638 NA Intergenic Intergenic -166761 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-15 chr14 27342189 27342434 + 1.12966497611638 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 6274 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-29 chr4 84546266 84546458 + 1.12966497611638 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 128724 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-33 chr5 34948975 34949162 + 1.12966497611638 NA promoter-TSS (NM_173402) promoter-TSS (NM_173402) -380 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-20 chr3 102665543 102665889 + 1.12966497611638 NA Intergenic Intergenic -69054 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-4 chr13 112318407 112318617 + 1.12966497611638 NA exon (NM_001168405, exon 2 of 6) exon (NM_001168405, exon 2 of 6) 29994 NM_001168404 77318 Mm.159895 NM_029898 ENSMUSG00000049985 Ankrd55 C030011J08Rik ankyrin repeat domain 55 protein-coding unique_peak1_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-3 chr9 56104125 56104313 + 1.12966497611638 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 14243 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-5 chr3 93000166 93000362 + 1.12966497611638 NA Intergenic Intergenic 8038 NM_001018079 69520 Mm.439968 NM_001018079 ENSMUSG00000068885 Lce3f 2310002A05Rik late cornified envelope 3F protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-43 chr9 32725833 32726099 + 1.12966497611638 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 29924 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-2 chr19 28665729 28665975 + 1.12966497611638 NA exon (NM_175459, exon 2 of 11) exon (NM_175459, exon 2 of 11) -12372 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638 chr10 79779272 79779543 + 1.12966497611638 NA intron (NM_031380, intron 2 of 4) intron (NM_031380, intron 2 of 4) 2133 NM_031380 83554 Mm.251710 NM_031380 ENSMUSG00000020325 Fstl3 E030038F23Rik|Flrg follistatin-like 3 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-11 chr16 18401227 18401460 + 1.12966497611638 NA intron (NM_033474, intron 9 of 18) intron (NM_033474, intron 9 of 18) 8780 NM_001272032 11877 Mm.293599 NM_033474 ENSMUSG00000000325 Arvcf - armadillo repeat gene deleted in velocardiofacial syndrome protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-32 chr3 37731293 37731585 + 1.12966497611638 NA Intergenic Intergenic -7079 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-37 chr5 67260361 67260576 + 1.12966497611638 NA promoter-TSS (NM_028975) promoter-TSS (NM_028975) -97 NM_001285452 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-46 chrX 134541018 134541207 + 1.12966497611638 NA intron (NM_013898, intron 1 of 1) intron (NM_013898, intron 1 of 1) 558 NM_013898 30058 Mm.214504 NM_013898 ENSMUSG00000048007 Timm8a1 DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a translocase of inner mitochondrial membrane 8A1 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-25 chr19 56035242 56035446 + 1.12966497611638 NA Intergenic Intergenic 140023 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638 chr1 138930005 138930238 + 1.12966497611638 NA Intergenic Intergenic -33588 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding common_peak1_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-3 chr11 59731839 59732056 + 1.12966497611638 NA intron (NR_045476, intron 3 of 5) intron (NR_045476, intron 3 of 5) 8207 NR_045476 69320 Mm.443242 NR_045476 ENSMUSG00000086330 1700007J10Rik 4930573L17Rik RIKEN cDNA 1700007J10 gene ncRNA common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-6 chr5 24818925 24819120 + 1.12966497611638 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 23339 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-18 chr15 85555311 85555557 + 1.12966497611638 NA intron (NM_009528, intron 2 of 3) intron (NM_009528, intron 2 of 3) 22636 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-32 chr4 137510136 137510332 + 1.12966497611638 NA intron (NM_008305, intron 6 of 96) intron (NM_008305, intron 6 of 96) -28052 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA unique_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-4 chr4 129999301 129999610 + 1.12966497611638 NA intron (NM_001199696, intron 2 of 28) MIRc|SINE|MIR 7401 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-18 chr19 37910700 37910904 + 1.12966497611638 NA intron (NM_001302140, intron 48 of 53) intron (NM_001302140, intron 48 of 53) 132775 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-8 chr14 76552999 76553253 + 1.12966497611638 NA intron (NM_001360046, intron 2 of 3) intron (NM_001360046, intron 2 of 3) 3561 NR_153389 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-14 chr14 54641546 54641783 + 1.12966497611638 NA promoter-TSS (NM_199470) promoter-TSS (NM_199470) -300 NM_199470 239096 Mm.386871 NM_199470 ENSMUSG00000059674 Cdh24 1700040A22Rik cadherin-like 24 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-22 chr17 28272862 28273081 + 1.12966497611638 NA non-coding (NR_045427, exon 3 of 3) non-coding (NR_045427, exon 3 of 3) 651 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-31 chr9 65548368 65548593 + 1.12966497611638 NA Intergenic Intergenic 31607 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-2 chr15 13236086 13236312 + 1.12966497611638 NA Intergenic Intergenic -62524 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-42 chr8 121196410 121196620 + 1.12966497611638 NA Intergenic Intergenic 68830 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-4 chr6 54816727 54816931 + 1.12966497611638 NA promoter-TSS (NM_199143) promoter-TSS (NM_199143) -87 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-45 chr9 92543771 92543965 + 1.12966497611638 NA promoter-TSS (NR_029474) promoter-TSS (NR_029474) -999 NR_029474 78575 Mm.407669 NR_029474 ENSMUSG00000103622 B430319G15Rik D530025C14Rik RIKEN cDNA B430319G15 gene ncRNA unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-14 chr13 112443097 112443300 + 1.12966497611638 NA Intergenic Intergenic -20872 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-25 chr2 181459677 181459911 + 1.12966497611638 NA promoter-TSS (NM_028125) promoter-TSS (NM_028125) -368 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-4 chr10 79841780 79842062 + 1.12966497611638 NA intron (NR_038088, intron 3 of 4) intron (NR_038088, intron 3 of 4) -12511 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-8 chr8 71950437 71950727 + 1.12966497611638 NA promoter-TSS (NM_001164581) promoter-TSS (NM_001164581) -484 NM_001164581 234413 Mm.334607 NM_001164581 ENSMUSG00000052446 Zfp961 A230105L22Rik|BC065788|mszf37|mszf55-2 zinc finger protein 961 protein-coding common_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-3 chr19 4466213 4466436 + 1.12966497611638 NA intron (NM_134164, intron 2 of 7) MIR|SINE|MIR 10819 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak1_7_10_-0.722336594846257_3.09826332121417_1.12966497611638 chr11 16829151 16829372 + 1.12966497611638 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 77058 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-22 chr2 158226395 158226631 + 1.12966497611638 NA intron (NM_001131021, intron 1 of 15) intron (NM_001131021, intron 1 of 15) 2711 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-40 chr8 106516243 106516465 + 1.12966497611638 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 5502 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-9 chr6 143641480 143641692 + 1.12966497611638 NA intron (NR_045732, intron 1 of 4) intron (NR_045732, intron 1 of 4) 9702 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638 chr11 53774973 53775203 + 1.12966497611638 NA exon (NM_001159396, exon 8 of 10) exon (NM_001159396, exon 8 of 10) 4615 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-23 chr17 44458586 44458835 + 1.12966497611638 NA Intergenic Intergenic 270138 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg|nmf318 chloride intracellular channel 5 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-2 chr1 153738191 153738413 + 1.12966497611638 NA promoter-TSS (NR_046171) promoter-TSS (NR_046171) -473 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-4 chr4 125115913 125116130 + 1.12966497611638 NA Intergenic Intergenic 11860 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-31 chr4 115227028 115227294 + 1.12966497611638 NA Intergenic Intergenic -14923 NM_001100183 230639 Mm.466610 NM_001100183 ENSMUSG00000083138 Cyp4a29 Cyp4a29-ps cytochrome P450, family 4, subfamily a, polypeptide 29 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-30 chr2 167850652 167850939 + 1.12966497611638 NA Intergenic Intergenic -81532 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-13 chr13 99398836 99399032 + 1.12966497611638 NA intron (NM_173757, intron 4 of 10) intron (NM_173757, intron 4 of 10) 13892 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-30 chr9 63980794 63981015 + 1.12966497611638 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 41155 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-2 chr1 40234741 40234941 + 1.12966497611638 NA intron (NM_008362, intron 1 of 10) intron (NM_008362, intron 1 of 10) 9761 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-19 chr18 54985345 54985587 + 1.12966497611638 NA intron (NM_175751, intron 2 of 9) intron (NM_175751, intron 2 of 9) 4714 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-16 chr19 8705722 8706019 + 1.12966497611638 NA Intergenic PB1D7|SINE|Alu 8027 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-2 chr11 116103176 116103402 + 1.12966497611638 NA Intergenic (CATA)n|Simple_repeat|Simple_repeat 6946 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-3 chr9 59353101 59353296 + 1.12966497611638 NA intron (NR_153195, intron 1 of 15) intron (NR_153195, intron 1 of 15) 310 NM_001359558 102774 Mm.200714 NM_175325 ENSMUSG00000025235 Bbs4 AW537059|AW742241|D9Ertd464e Bardet-Biedl syndrome 4 (human) protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-12 chr13 91040891 91041123 + 1.12966497611638 NA intron (NM_025770, intron 3 of 7) intron (NM_025770, intron 3 of 7) 117885 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-6 chr4 136134337 136134627 + 1.12966497611638 NA Intergenic Intergenic -9340 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-44 chr9 73130425 73130612 + 1.12966497611638 NA Intergenic Intergenic 17049 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-3 chr2 27418676 27418886 + 1.12966497611638 NA intron (NM_009500, intron 1 of 27) intron (NM_009500, intron 1 of 27) 8827 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638 chr1 40219023 40219239 + 1.12966497611638 NA Intergenic Intergenic -5949 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-3 chr10 58321736 58322015 + 1.12966497611638 NA Intergenic B1_Mur2|SINE|Alu -1672 NM_001359115 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-2 chr11 77984535 77984761 + 1.12966497611638 NA intron (NM_174852, intron 2 of 14) intron (NM_174852, intron 2 of 14) 1832 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-37 chr6 117104301 117104515 + 1.12966497611638 NA Intergenic Intergenic -64127 NM_001012477 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-16 chr15 25699459 25699689 + 1.12966497611638 NA intron (NM_019472, intron 2 of 40) intron (NM_019472, intron 2 of 40) -53632 NM_001353142 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-2 chr15 66816118 66816306 + 1.12966497611638 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 15617 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-15 chr19 7268406 7268606 + 1.12966497611638 NA 5' UTR (NM_001320554, exon 1 of 12) 5' UTR (NM_001320554, exon 1 of 12) 227 NM_001320554 104383 Mm.283859 NM_054048 ENSMUSG00000024968 Rcor2 1A13|AW122124|CoREST|Rcor|Rcor1 REST corepressor 2 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-3 chr12 17993126 17993330 + 1.12966497611638 NA Intergenic CpG 302419 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-36 chr4 129955324 129955543 + 1.12966497611638 NA Intergenic Intergenic -4941 NR_040647 72225 Mm.102193 NR_040647 1700003M07Rik - RIKEN cDNA 1700003M07 gene ncRNA common_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-4 chr2 127256657 127256858 + 1.12966497611638 NA intron (NM_175145, intron 3 of 3) ID4|SINE|ID 8782 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-24 chr17 47374758 47374966 + 1.12966497611638 NA intron (NM_183086, intron 3 of 6) intron (NM_183086, intron 3 of 6) 5665 NM_183086 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-44 chr9 111476926 111477171 + 1.12966497611638 NA intron (NM_172928, intron 2 of 4) intron (NM_172928, intron 2 of 4) 37967 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak1_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-2 chr6 91699907 91700131 + 1.12966497611638 NA intron (NM_009320, intron 2 of 14) intron (NM_009320, intron 2 of 14) 15952 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-12 chr16 55788729 55788996 + 1.12966497611638 NA Intergenic Intergenic 33276 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-17 chr17 73067661 73067872 + 1.12966497611638 NA Intergenic Intergenic -40219 NM_001177968 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-20 chr19 4510981 4511180 + 1.12966497611638 NA intron (NM_001162946, intron 1 of 20) intron (NM_001162946, intron 1 of 20) 608 NM_001162946 18563 Mm.1845 NM_008797 ENSMUSG00000024892 Pcx Pc|Pcb pyruvate carboxylase protein-coding common_peak1_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-2 chr11 4595280 4595492 + 1.12966497611638 NA promoter-TSS (NM_028860) promoter-TSS (NM_028860) -571 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-31 chr2 180220376 180220605 + 1.12966497611638 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 5369 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-28 chr2 152823622 152824027 + 1.12966497611638 NA intron (NM_009743, intron 2 of 2) MER34|LTR|ERV1 4665 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-36 chr6 85302664 85302859 + 1.12966497611638 NA intron (NM_178639, intron 2 of 13) intron (NM_178639, intron 2 of 13) 30661 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-17 chr19 18800049 18800301 + 1.12966497611638 NA intron (NM_153417, intron 11 of 38) intron (NM_153417, intron 11 of 38) 50192 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-45 chrX 19159937 19160185 + 1.12966497611638 NA Intergenic Intergenic -13090 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_8_10_-0.553610410818104_3.18262641322825_1.12966497611638 chr18 32141093 32141356 + 1.12966497611638 NA Intergenic Intergenic -1654 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-9 chr12 69364090 69364403 + 1.12966497611638 NA Intergenic Intergenic -7070 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-30 chr4 108328259 108328564 + 1.12966497611638 NA intron (NM_027250, intron 1 of 2) CpG 259 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-25 chr6 125145635 125145835 + 1.12966497611638 NA TTS (NM_138747) TTS (NM_138747) 511 NM_001302779 320678 Mm.129415 NM_178787 ENSMUSG00000038271 Iffo1 4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo intermediate filament family orphan 1 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-19 chr16 23445301 23445531 + 1.12966497611638 NA Intergenic Intergenic 16283 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-27 chr4 4635982 4636173 + 1.12966497611638 NA Intergenic Intergenic -106619 NM_001277919 622019 Mm.246123 NM_001277919 Gm11780 - predicted gene 11780 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-9 chr11 114873791 114874074 + 1.12966497611638 NA Intergenic Intergenic -16109 NM_001347654 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding unique_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638-3 chr13 13546116 13546324 + 1.12966497611638 NA Intergenic Intergenic -44189 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-21 chr16 93005773 93006002 + 1.12966497611638 NA Intergenic Intergenic -179813 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_11_7_0.317930626018495_3.15896531300925_1.12966497611638 chr14 32014849 32015055 + 1.12966497611638 NA Intergenic Intergenic -14151 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-33 chr4 62761437 62761636 + 1.12966497611638 NA Intergenic L2c|LINE|L2 87562 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-11 chr13 5604590 5604780 + 1.12966497611638 NA Intergenic Intergenic 253407 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-24 chr2 167708725 167709010 + 1.12966497611638 NA Intergenic Intergenic 17690 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-4 chr11 96300841 96301085 + 1.12966497611638 NA 3' UTR (NM_008269, exon 2 of 2) 3' UTR (NM_008269, exon 2 of 2) 1889 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-4 chr1 193415352 193415606 + 1.12966497611638 NA Intergenic Intergenic -45197 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-35 chr5 138279680 138279954 + 1.12966497611638 NA promoter-TSS (NM_016964) promoter-TSS (NM_016964) 120 NM_172412 71951 Mm.77066 NM_172412 ENSMUSG00000029510 Gpc2 2410016G05Rik glypican 2 (cerebroglycan) protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-7 chr11 97422413 97422642 + 1.12966497611638 NA Intergenic Intergenic -27633 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-11 chr12 79937024 79937270 + 1.12966497611638 NA promoter-TSS (NR_131074) promoter-TSS (NR_131074) -883 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-14 chr18 74823850 74824138 + 1.12966497611638 NA Intergenic B1F|SINE|Alu 44782 NM_177470 52538 Mm.245724 NM_177470 ENSMUSG00000036880 Acaa2 0610011L04Rik|AI255831|AI265397|D18Ertd240e acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-10 chr12 98003885 98004124 + 1.12966497611638 NA Intergenic Intergenic 255455 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-20 chr16 34807400 34807606 + 1.12966497611638 NA intron (NM_139300, intron 1 of 31) intron (NM_139300, intron 1 of 31) 22553 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-24 chr6 100800982 100801278 + 1.12966497611638 NA intron (NM_198612, intron 6 of 6) MIRb|SINE|MIR -32508 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-28 chr4 63217988 63218181 + 1.12966497611638 NA intron (NM_025685, intron 1 of 60) intron (NM_025685, intron 1 of 60) 2672 NM_025685 373864 Mm.194116 NM_025685 ENSMUSG00000045672 Col27a1 5730512J02Rik|AI449266 collagen, type XXVII, alpha 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-5 chr10 14017434 14017663 + 1.12966497611638 NA intron (NM_001358783, intron 2 of 12) intron (NM_001358783, intron 2 of 12) 51169 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-29 chr2 152906516 152906747 + 1.12966497611638 NA Intergenic Intergenic -4721 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-8 chr5 24818820 24819038 + 1.12966497611638 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 23432 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-41 chr8 123750175 123750376 + 1.12966497611638 NA Intergenic Intergenic 16317 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-21 chr2 26502432 26502743 + 1.12966497611638 NA intron (NM_008714, intron 1 of 33) CpG 1235 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-11 chr8 18617107 18617312 + 1.12966497611638 NA intron (NM_173189, intron 3 of 13) intron (NM_173189, intron 3 of 13) 22078 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-7 chr10 84725999 84726282 + 1.12966497611638 NA 3' UTR (NM_027423, exon 28 of 28) 3' UTR (NM_027423, exon 28 of 28) -29908 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-38 chr6 120153669 120153910 + 1.12966497611638 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -40034 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-29 chr8 40438243 40438480 + 1.12966497611638 NA intron (NM_178395, intron 1 of 12) intron (NM_178395, intron 1 of 12) 14546 NM_001357249 70546 Mm.34326 NM_178395 ENSMUSG00000039470 Zdhhc2 5730415P04Rik|6430583A19Rik|DHHC-2 zinc finger, DHHC domain containing 2 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-13 chr17 3335429 3335712 + 1.12966497611638 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) 8997 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-18 chr18 12946948 12947188 + 1.12966497611638 NA Intergenic Intergenic -5227 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-5 chr14 18554537 18554749 + 1.12966497611638 NA Intergenic Intergenic -222799 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-8 chr12 11391034 11391243 + 1.12966497611638 NA intron (NM_012038, intron 1 of 3) intron (NM_012038, intron 1 of 3) 45511 NM_012038 26950 Mm.27005 NM_012038 ENSMUSG00000054459 Vsnl1 VILIP|Vnsl1 visinin-like 1 protein-coding unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-3 chr1 71003409 71003607 + 1.12966497611638 NA Intergenic Intergenic 99464 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 - BRCA1 associated RING domain 1 protein-coding common_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638 chr17 6813472 6813705 + 1.12966497611638 NA Intergenic Intergenic -30808 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-23 chr4 156084282 156084583 + 1.12966497611638 NA Intergenic Intergenic -24630 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 - predicted gene 13648 ncRNA unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-10 chr16 14451638 14451911 + 1.12966497611638 NA intron (NM_008576, intron 19 of 30) intron (NM_008576, intron 19 of 30) 90216 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-12 chr8 82630217 82630432 + 1.12966497611638 NA Intergenic B1_Mus1|SINE|Alu 143802 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak1_8_10_-0.553610410818104_3.18262641322825_1.12966497611638 chr10 15300541 15300728 + 1.12966497611638 NA Intergenic Intergenic -491143 NR_131087 77538 Mm.128235 NR_131087 ENSMUSG00000112227 C330004P14Rik - RIKEN cDNA C330004P14 gene ncRNA unique_peak1_11_7_0.317930626018495_3.15896531300925_1.12966497611638-15 chr14 101852944 101853209 + 1.12966497611638 NA intron (NM_001347628, intron 1 of 26) intron (NM_001347628, intron 1 of 26) 12453 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-38 chr5 135951355 135951592 + 1.12966497611638 NA Intergenic Intergenic -16832 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-2 chr17 79742040 79742279 + 1.12966497611638 NA Intergenic Intergenic -27118 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-3 chr11 90230178 90230387 + 1.12966497611638 NA Intergenic Intergenic -19194 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding unique_peak2_7_10_-0.722336594846257_3.09826332121417_1.12966497611638-26 chr2 27840903 27841149 + 1.12966497611638 NA Intergenic Intergenic -45399 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak2_8_10_-0.553610410818104_3.18262641322825_1.12966497611638-19 chr2 117502937 117503184 + 1.12966497611638 NA Intergenic Intergenic -160183 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_124_76_0.408114240638042_6.47084366101392_1.12865934592523 chr5 135186622 135188078 + 1.12865934592523 NA promoter-TSS (NM_011714) promoter-TSS (NM_011714) 27 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak2_124_76_0.408114240638042_6.47084366101392_1.12865934592523 chr5 134455257 134456520 + 1.12865934592523 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 374 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak2_92_102_-0.435215385402982_6.46889283448173_1.1286593459252-2 chr9 102642931 102644534 + 1.1286593459252 NA Intergenic Intergenic 17436 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_92_102_-0.435215385402982_6.46889283448173_1.1286593459252 chr13 23745701 23746566 + 1.1286593459252 NA promoter-TSS (NM_175664) promoter-TSS (NM_175664) -601 NM_175664 319178 Mm.390567 NM_175664 ENSMUSG00000075031 Hist1h2bb H2b-143 histone cluster 1, H2bb protein-coding common_peak1_92_102_-0.435215385402982_6.46889283448173_1.1286593459252 chr13 23745699 23746561 + 1.1286593459252 NA promoter-TSS (NM_175664) promoter-TSS (NM_175664) -604 NM_175664 319178 Mm.390567 NM_175664 ENSMUSG00000075031 Hist1h2bb H2b-143 histone cluster 1, H2bb protein-coding common_peak1_207_135_0.316910394485042_7.24591803849286_1.12849108698973 chr8 88283799 88285874 + 1.12849108698973 NA intron (NM_001109756, intron 1 of 27) intron (NM_001109756, intron 1 of 27) 1844 NM_001109756 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak2_164_169_-0.336778012132552_7.24100193007143_1.12849108698968 chr16 94569697 94571169 + 1.12849108698968 NA promoter-TSS (NM_001113389) promoter-TSS (NM_001113389) 227 NM_007890 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172 chr1 90770252 90770818 + 1.1282783422172 NA intron (NM_001243009, intron 39 of 40) RSINE1|SINE|B4 73436 NM_001243008 12835 Mm.7562 NM_009935 ENSMUSG00000048126 Col6a3 AI507288|Col6a-3 collagen, type VI, alpha 3 protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-4 chr17 14942512 14943045 + 1.1282783422172 NA promoter-TSS (NM_001083880) promoter-TSS (NM_001083880) 346 NM_175173 71682 Mm.122698 NM_175173 ENSMUSG00000046991 Wdr27 0610012K18Rik WD repeat domain 27 protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172 chr13 32939683 32939994 + 1.1282783422172 NA Intergenic Intergenic -25675 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding unique_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-4 chr17 78507831 78508379 + 1.1282783422172 NA promoter-TSS (NM_028813) promoter-TSS (NM_028813) 42 NM_028813 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-5 chr5 76589096 76589462 + 1.1282783422172 NA Intergenic Intergenic -2435 NM_199032 381644 Mm.332452 NM_199032 ENSMUSG00000036403 Cep135 BC062951|Cep4|Gm1044 centrosomal protein 135 protein-coding unique_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-6 chr5 124007372 124007845 + 1.1282783422172 NA intron (NM_177876, intron 3 of 3) intron (NM_177876, intron 3 of 3) 10756 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_18_29_-0.930672161490127_4.44155451486345_1.1282783422172 chr1 43218935 43219223 + 1.1282783422172 NA Intergenic Intergenic -22318 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-7 chr7 90344777 90345289 + 1.1282783422172 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) -41948 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-2 chr13 69587415 69587801 + 1.1282783422172 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 23855 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-9 chr6 91643376 91643875 + 1.1282783422172 NA Intergenic Intergenic -40442 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-9 chr8 121652581 121652841 + 1.1282783422172 NA promoter-TSS (NM_080855) promoter-TSS (NM_080855) -778 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-4 chr19 45057277 45057546 + 1.1282783422172 NA Intergenic Intergenic 9835 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-3 chr7 16387392 16387738 + 1.1282783422172 NA intron (NM_019748, intron 1 of 8) CpG 331 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172 chr11 87749954 87750539 + 1.1282783422172 NA Intergenic Intergenic -6618 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA unique_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-3 chr16 45886526 45887156 + 1.1282783422172 NA Intergenic Intergenic -42090 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-11 chr9 50171146 50171667 + 1.1282783422172 NA Intergenic Intergenic 61776 NR_131161 71873 NR_131161 ENSMUSG00000110916 2310003N18Rik - RIKEN cDNA 2310003N18 gene ncRNA common_peak1_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-2 chr13 23757144 23757469 + 1.1282783422172 NA TTS (NM_178193) TTS (NM_178193) 369 NM_178193 326620 Mm.261642 NM_178193 ENSMUSG00000069266 Hist1h4b - histone cluster 1, H4b protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-7 chr3 93026232 93026566 + 1.1282783422172 NA Intergenic Intergenic -7338 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-3 chr15 71890379 71890756 + 1.1282783422172 NA exon (NM_027174, exon 38 of 64) exon (NM_027174, exon 38 of 64) 143660 NM_027174 69700 Mm.322500 NM_027174 ENSMUSG00000079022 Col22a1 2310067L16Rik|C80743 collagen, type XXII, alpha 1 protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172 chr14 64964499 64965099 + 1.1282783422172 NA intron (NM_001253731, intron 1 of 16) intron (NM_001253731, intron 1 of 16) 14754 NM_001253731 210925 Mm.71332 NM_153414 ENSMUSG00000021975 Ints9 BC028953|D14Ertd231e integrator complex subunit 9 protein-coding unique_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-2 chr16 32609105 32609648 + 1.1282783422172 NA intron (NM_001357298, intron 1 of 18) CpG 254 NM_001357298 22042 Mm.28683 NM_011638 ENSMUSG00000022797 Tfrc 2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90 transferrin receptor protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-6 chr5 146220450 146220922 + 1.1282783422172 NA intron (NM_028774, intron 1 of 4) intron (NM_028774, intron 1 of 4) 215 NM_001256087 74132 Mm.26696 NM_028774 ENSMUSG00000029634 Rnf6 1200013I08Rik|5730419H05Rik|AA537053 ring finger protein (C3H2C3 type) 6 protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-8 chr7 144035338 144035903 + 1.1282783422172 NA Intergenic Intergenic 26366 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-6 chr18 61091157 61091557 + 1.1282783422172 NA Intergenic Intergenic -14215 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-5 chr9 41516467 41516755 + 1.1282783422172 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) -14814 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA unique_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-5 chr3 79879854 79880315 + 1.1282783422172 NA Intergenic Intergenic -5846 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-3 chr19 41326540 41327016 + 1.1282783422172 NA intron (NM_031376, intron 6 of 16) intron (NM_031376, intron 6 of 16) 58292 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-2 chr18 54906117 54906606 + 1.1282783422172 NA intron (NM_001360787, intron 2 of 8) intron (NM_001360787, intron 2 of 8) 83819 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak2_18_29_-0.930672161490127_4.44155451486345_1.1282783422172-4 chr7 131560383 131560619 + 1.1282783422172 NA promoter-TSS (NM_001317350) promoter-TSS (NM_001317350) 7 NM_001317350 12237 Mm.927 NM_009774 ENSMUSG00000066979 Bub3 AU019800|AU021329|AU043350|AW146323|C78067 BUB3 mitotic checkpoint protein protein-coding common_peak2_34_16_0.763893151295465_4.46940941689807_1.1282783422172 chr19 57272972 57273242 + 1.1282783422172 NA promoter-TSS (NR_045319) promoter-TSS (NR_045319) -853 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-2 chr14 76553504 76553911 + 1.1282783422172 NA intron (NM_001360046, intron 2 of 3) intron (NM_001360046, intron 2 of 3) 2980 NR_153389 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-5 chr18 34860571 34861019 + 1.1282783422172 NA promoter-TSS (NM_007913) promoter-TSS (NM_007913) -412 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-8 chr3 136431726 136432239 + 1.1282783422172 NA Intergenic Intergenic 17367 NR_040592 70055 Mm.261063 NR_040592 ENSMUSG00000099508 1700030L20Rik - RIKEN cDNA 1700030L20 gene ncRNA unique_peak1_34_16_0.763893151295465_4.46940941689807_1.1282783422172-10 chr8 126828354 126828645 + 1.1282783422172 NA Intergenic Intergenic -20521 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_386_267_0.227714585060081_8.17994648298781_1.12754083698599 chr3 90585987 90587727 + 1.12754083698599 NA promoter-TSS (NM_001355600) promoter-TSS (NM_001355600) -95 NM_001355600 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak2_106_64_0.429798224000704_6.23726692502881_1.12735745316731 chr17 84115851 84116860 + 1.12735745316731 NA Intergenic Intergenic 37695 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_106_64_0.429798224000704_6.23726692502881_1.12735745316731-2 chr19 4438581 4439375 + 1.12735745316731 NA promoter-TSS (NR_045990) promoter-TSS (NR_045990) -345 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak2_107_64_0.44312405829846_6.24392984217768_1.12735745316731 chr4 134534188 134535261 + 1.12735745316731 NA 5' UTR (NM_001355188, exon 2 of 8) 5' UTR (NM_001355188, exon 2 of 8) 372 NM_001355188 76824 Mm.30153 NM_029759 ENSMUSG00000046671 Mtfr1l 2410166I05Rik|AI480750|Fam54b mitochondrial fission regulator 1-like protein-coding common_peak1_107_64_0.44312405829846_6.24392984217768_1.12735745316731 chr6 28261094 28262304 + 1.12735745316731 NA promoter-TSS (NM_001081678) promoter-TSS (NM_001081678) -98 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding common_peak1_85_95_-0.445774950084967_6.36207502567867_1.1267337883649-2 chr7 64287739 64288706 + 1.1267337883649 NA intron (NM_172742, intron 1 of 15) intron (NM_172742, intron 1 of 15) 552 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_84_95_-0.46252972420407_6.35369763861912_1.1267337883649 chr1 155052992 155053668 + 1.1267337883649 NA Intergenic Intergenic 29934 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak1_85_95_-0.445774950084967_6.36207502567867_1.1267337883649 chr17 13682928 13683490 + 1.1267337883649 NA Intergenic Intergenic -77332 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak2_84_95_-0.46252972420407_6.35369763861912_1.1267337883649-2 chr18 60732645 60733598 + 1.1267337883649 NA promoter-TSS (NM_001348102) promoter-TSS (NM_001348102) 20 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_85_95_-0.445774950084967_6.36207502567867_1.1267337883649 chr19 42051451 42052630 + 1.1267337883649 NA promoter-TSS (NM_025752) promoter-TSS (NM_025752) -188 NM_025752 66765 Mm.440412 NM_025752 ENSMUSG00000090369 4933411K16Rik - RIKEN cDNA 4933411K16 gene protein-coding common_peak2_115_70_0.41811092229934_6.35880258065435_1.1267337883649 chr16 55636197 55637081 + 1.1267337883649 NA Intergenic Intergenic 141908 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_115_70_0.41811092229934_6.35880258065435_1.1267337883649-2 chr5 39636873 39637829 + 1.1267337883649 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 7280 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak2_145_151_-0.350567057450903_7.07264398471813_1.126519948992 chr1 176813571 176815361 + 1.126519948992 NA promoter-TSS (NM_029756) promoter-TSS (NM_029756) -194 NR_151682 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak1_30_42_-0.748760235576071_5.05188463691406_1.12624088074372-2 chr4 58185048 58185719 + 1.12624088074372 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 21213 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_30_42_-0.748760235576071_5.05188463691406_1.12624088074372 chr1 89071607 89072226 + 1.12624088074372 NA intron (NM_133816, intron 1 of 5) intron (NM_133816, intron 1 of 5) 1501 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_30_42_-0.748760235576071_5.05188463691406_1.12624088074372-4 chr19 24280320 24280778 + 1.12624088074372 NA promoter-TSS (NM_008044) promoter-TSS (NM_008044) 37 NM_008044 14297 Mm.7319 NM_008044 ENSMUSG00000059363 Fxn FA|FARR|Frda|X25 frataxin protein-coding common_peak2_30_42_-0.748760235576071_5.05188463691406_1.12624088074372-2 chr10 80147824 80148456 + 1.12624088074372 NA promoter-TSS (NM_021565) promoter-TSS (NM_021565) -132 NM_001305798 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_31_42_-0.703279690057546_5.07462490967333_1.12624088074372-2 chr4 117120753 117121174 + 1.12624088074372 NA intron (NR_024078, intron 6 of 6) CpG 4762 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak2_31_42_-0.703279690057546_5.07462490967333_1.12624088074372 chr1 72583433 72583961 + 1.12624088074372 NA intron (NM_018817, intron 1 of 16) intron (NM_018817, intron 1 of 16) 446 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding common_peak2_30_42_-0.748760235576071_5.05188463691406_1.12624088074372-3 chr17 53567477 53568268 + 1.12624088074372 NA intron (NR_151733, intron 1 of 16) CpG 901 NR_151733 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_31_42_-0.703279690057546_5.07462490967333_1.12624088074372-5 chr8 33987588 33988276 + 1.12624088074372 NA Intergenic Intergenic -58069 NM_001042675 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_31_42_-0.703279690057546_5.07462490967333_1.12624088074372-2 chr10 80075897 80076520 + 1.12624088074372 NA promoter-TSS (NM_001359636) promoter-TSS (NM_001359636) -769 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_30_42_-0.748760235576071_5.05188463691406_1.12624088074372 chr1 155040647 155041268 + 1.12624088074372 NA Intergenic Intergenic 42307 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_31_42_-0.703279690057546_5.07462490967333_1.12624088074372-3 chr6 72616972 72617373 + 1.12624088074372 NA promoter-TSS (NM_009444) promoter-TSS (NM_009444) -172 NM_009443 22134 Mm.246563 NM_009443 ENSMUSG00000056429 Tgoln1 AU015504|D6Ertd384e|TGN38|TGN38A|Ttgn1 trans-golgi network protein protein-coding common_peak1_31_42_-0.703279690057546_5.07462490967333_1.12624088074372-3 chr6 43292780 43293380 + 1.12624088074372 NA Intergenic Intergenic 16474 NM_130869 18291 Mm.17715 NM_130869 ENSMUSG00000029736 Nobox OG2|Og2x NOBOX oogenesis homeobox protein-coding common_peak2_30_42_-0.748760235576071_5.05188463691406_1.12624088074372-5 chr2 121270790 121271378 + 1.12624088074372 NA intron (NM_013735, intron 1 of 27) CpG 323 NM_001290830 27223 Mm.215389 NM_013735 ENSMUSG00000043909 Trp53bp1 53BP1|Tp53bp1|m53BP1|p53BP1 transformation related protein 53 binding protein 1 protein-coding common_peak1_31_42_-0.703279690057546_5.07462490967333_1.12624088074372 chr3 137288068 137288501 + 1.12624088074372 NA Intergenic Intergenic -52794 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak2_31_42_-0.703279690057546_5.07462490967333_1.12624088074372-4 chr6 98949438 98950132 + 1.12624088074372 NA intron (NM_001197321, intron 11 of 17) intron (NM_001197321, intron 11 of 17) 78513 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_30_42_-0.748760235576071_5.05188463691406_1.12624088074372-6 chr5 36382453 36383208 + 1.12624088074372 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 15309 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak2_50_26_0.635778957400438_5.07277698086369_1.12624088074371-2 chr15 102104465 102104904 + 1.12624088074371 NA intron (NM_001355636, intron 2 of 28) intron (NM_001355636, intron 2 of 28) 1750 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_50_26_0.635778957400438_5.07277698086369_1.12624088074371-3 chr7 45920924 45921216 + 1.12624088074371 NA promoter-TSS (NM_001146346) promoter-TSS (NM_001146346) -221 NM_001146346 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371-6 chr2 167775076 167775583 + 1.12624088074371 NA Intergenic Intergenic 84152 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371 chr1 77470383 77471041 + 1.12624088074371 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 26056 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371-3 chr16 4593697 4594272 + 1.12624088074371 NA promoter-TSS (NM_031184) promoter-TSS (NM_031184) -729 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371-2 chr16 93152810 93153759 + 1.12624088074371 NA Intergenic Intergenic 199905 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371 chr1 55088325 55088781 + 1.12624088074371 NA promoter-TSS (NM_010477) promoter-TSS (NM_010477) -310 NM_001356512 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371-5 chr2 152913460 152914421 + 1.12624088074371 NA intron (NM_001081044, intron 3 of 11) intron (NM_001081044, intron 3 of 11) 2588 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371-2 chr10 5823381 5823803 + 1.12624088074371 NA exon (NM_175374, exon 1 of 7) exon (NM_175374, exon 1 of 7) 351 NM_175374 108853 Mm.55082 NM_175374 ENSMUSG00000019774 Mtrf1l 9130004K12Rik mitochondrial translational release factor 1-like protein-coding common_peak2_50_26_0.635778957400438_5.07277698086369_1.12624088074371 chr11 75510240 75510670 + 1.12624088074371 NA exon (NM_001029938, exon 2 of 8) exon (NM_001029938, exon 2 of 8) 361 NM_001029938 280408 Mm.41416 NM_001029938 ENSMUSG00000038195 Rilp AI835553|Gm857 Rab interacting lysosomal protein protein-coding common_peak1_50_26_0.635778957400438_5.07277698086369_1.12624088074371-4 chr19 18890815 18891281 + 1.12624088074371 NA intron (NM_153417, intron 38 of 38) intron (NM_153417, intron 38 of 38) 110069 NM_146095 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding common_peak2_91_53_0.480910820059543_5.99534291219324_1.12620916894576 chr1 105663947 105664664 + 1.12620916894576 NA promoter-TSS (NM_013784) promoter-TSS (NM_013784) 444 NM_029349 227446 Mm.337339 NM_029349 ENSMUSG00000026319 2310035C23Rik 6430401N10|Kiaa1468|Relch|mKIAA1468 RIKEN cDNA 2310035C23 gene protein-coding common_peak1_63_75_-0.531997428372278_5.98192879925745_1.12620916894576 chr11 57517945 57518945 + 1.12620916894576 NA promoter-TSS (NM_145426) promoter-TSS (NM_145426) 199 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak2_90_53_0.46525474229253_5.98751487330973_1.12620916894576 chr15 75841215 75841925 + 1.12620916894576 NA intron (NM_172121, intron 1 of 11) CpG 338 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak2_90_53_0.46525474229253_5.98751487330973_1.12620916894576-2 chr8 75088880 75089539 + 1.12620916894576 NA Intergenic Intergenic -4409 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak2_64_75_-0.509787419807838_5.99303380353967_1.12620916894576 chr17 28177142 28177941 + 1.12620916894576 NA intron (NM_001357995, intron 1 of 13) CpG 123 NM_172617 224656 Mm.267359 NM_172617 ENSMUSG00000024220 Zfp523 2810027J07|BC025615|Znf76 zinc finger protein 523 protein-coding common_peak1_90_53_0.46525474229253_5.98751487330973_1.12620916894576 chr6 33248560 33249725 + 1.12620916894576 NA promoter-TSS (NM_009148) promoter-TSS (NM_009148) 14 NM_001347089 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding common_peak1_314_302_-0.244256745618726_8.12104561066359_1.12541246188964 chr6 71989127 71991895 + 1.12541246188964 NA Intergenic MIRc|SINE|MIR 52017 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak2_314_302_-0.244256745618726_8.12104561066359_1.12541246188964 chr6 71989075 71991916 + 1.12541246188964 NA Intergenic MIRc|SINE|MIR 52033 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak1_76_43_0.521402833533892_5.72013303540424_1.12538602347823-3 chr18 67310854 67311928 + 1.12538602347823 NA intron (NM_053261, intron 5 of 7) intron (NM_053261, intron 5 of 7) 22168 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_76_43_0.521402833533892_5.72013303540424_1.12538602347823-4 chr4 74252010 74252954 + 1.12538602347823 NA intron (NM_001356561, intron 1 of 20) intron (NM_001356561, intron 1 of 20) 603 NM_001356561 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding common_peak1_76_43_0.521402833533892_5.72013303540424_1.12538602347823 chr14 62760186 62761090 + 1.12538602347823 NA exon (NM_008715, exon 1 of 19) intron (NR_045503, intron 1 of 6) 137 NR_045503 71000 Mm.399410 NR_045503 ENSMUSG00000097775 4931440J10Rik - RIKEN cDNA 4931440J10 gene ncRNA common_peak1_76_43_0.521402833533892_5.72013303540424_1.12538602347823-2 chr15 86058825 86059394 + 1.12538602347823 NA intron (NM_001205353, intron 1 of 18) CpG 382 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_51_63_-0.581516805118131_5.70924159744093_1.12538602347822-3 chr8 80739744 80740243 + 1.12538602347822 NA promoter-TSS (NM_053124) promoter-TSS (NM_053124) -534 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak2_51_63_-0.581516805118131_5.70924159744093_1.12538602347822-2 chr7 70350917 70351893 + 1.12538602347822 NA TTS (NM_009697) TTS (NM_009697) 9188 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak2_51_63_-0.581516805118131_5.70924159744093_1.12538602347822 chr15 44428078 44428426 + 1.12538602347822 NA promoter-TSS (NM_026149) promoter-TSS (NM_026149) 55 NM_001113554 67429 Mm.490404 NM_026149 ENSMUSG00000038736 Nudcd1 4921532K09Rik|AA407246|AW260430|AW556235|CML66-L|Cml66 NudC domain containing 1 protein-coding common_peak2_62_34_0.564087281301868_5.4113266575959_1.12519986426579 chr2 60209904 60210383 + 1.12519986426579 NA intron (NM_020575, intron 1 of 9) CpG 207 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak1_62_34_0.564087281301868_5.4113266575959_1.12519986426579-3 chr8 22397750 22398508 + 1.12519986426579 NA promoter-TSS (NR_045473) promoter-TSS (NR_045473) 148 NM_001358971 18408 Mm.200907 NM_181325 ENSMUSG00000031482 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein-coding common_peak2_62_34_0.564087281301868_5.4113266575959_1.12519986426579-3 chr8 122170371 122171095 + 1.12519986426579 NA Intergenic Intergenic -111408 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_62_34_0.564087281301868_5.4113266575959_1.12519986426579-2 chr4 138913348 138913917 + 1.12519986426579 NA exon (NM_028453, exon 1 of 8) exon (NM_028453, exon 1 of 8) 315 NM_028453 73162 Mm.238081 NM_028453 ENSMUSG00000041161 Otud3 3110030K17Rik OTU domain containing 3 protein-coding common_peak1_62_34_0.564087281301868_5.4113266575959_1.12519986426579 chr11 44519538 44520585 + 1.12519986426579 NA intron (NM_001166553, intron 1 of 5) intron (NM_001166553, intron 1 of 5) 684 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak2_62_34_0.564087281301868_5.4113266575959_1.12519986426579-2 chr7 130647161 130647589 + 1.12519986426579 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -45181 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak2_40_52_-0.649905907389517_5.40296750086844_1.12519986426578-2 chr17 5822923 5823276 + 1.12519986426578 NA Intergenic Intergenic -18281 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak2_40_52_-0.649905907389517_5.40296750086844_1.12519986426578-3 chr17 23564399 23564906 + 1.12519986426578 NA promoter-TSS (NM_001033496) promoter-TSS (NM_001033496) -426 NM_001033496 449521 Mm.268582 NM_001033496 ENSMUSG00000071256 Zfp213 BC038178|D17Ertd197e zinc finger protein 213 protein-coding common_peak2_40_52_-0.649905907389517_5.40296750086844_1.12519986426578 chr11 77765824 77767111 + 1.12519986426578 NA Intergenic Intergenic -10768 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_40_52_-0.649905907389517_5.40296750086844_1.12519986426578 chr9 88091202 88091783 + 1.12519986426578 NA Intergenic Intergenic -236117 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769-4 chr18 16738985 16740166 + 1.12396031894769 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 69671 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769-5 chr19 38039569 38040644 + 1.12396031894769 NA intron (NM_001302140, intron 1 of 53) RSINE1|SINE|B4 3471 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_57_69_-0.5543699955677_5.85209801916112_1.12396031894769-2 chr8 18783217 18783621 + 1.12396031894769 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -41857 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769-6 chr3 87171739 87172947 + 1.12396031894769 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 2404 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_83_48_0.490769872330928_5.86009478028067_1.12396031894769 chr11 96341725 96342436 + 1.12396031894769 NA TTS (NR_155303) TTS (NR_155303) -1689 NM_010458 15410 Mm.342481 NM_010458 ENSMUSG00000048763 Hoxb3 Hox-2.7 homeobox B3 protein-coding common_peak2_57_69_-0.5543699955677_5.85209801916112_1.12396031894769 chr6 119847172 119848054 + 1.12396031894769 NA promoter-TSS (NR_030776) promoter-TSS (NR_030776) 537 NM_053204 111173 Mm.288860 NM_053204 ENSMUSG00000030172 Erc1 4930404L01Rik|5033405M01Rik|9630025C19Rik|B430107L16Rik|CAST2|ELKS|Elks1|RAB6IP2A|RAB6IP2B|Rab6ip2|mKIAA1081 ELKS/RAB6-interacting/CAST family member 1 protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769-7 chr7 131409780 131410418 + 1.12396031894769 NA promoter-TSS (NM_025826) promoter-TSS (NM_025826) 379 NM_175115 67143 Mm.334273 NM_175115 ENSMUSG00000040167 Ikzf5 2610034F18Rik|PEGASUS|Zfpn1a5 IKAROS family zinc finger 5 protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769-2 chr12 118813782 118814647 + 1.12396031894769 NA Intergenic RMER12C|LTR|ERVK -32115 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769 chr11 86484631 86485312 + 1.12396031894769 NA intron (NM_029788, intron 1 of 8) CpG 314 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding common_peak1_83_48_0.490769872330928_5.86009478028067_1.12396031894769-3 chr16 20301472 20302273 + 1.12396031894769 NA intron (NM_001005767, intron 1 of 9) intron (NM_001005767, intron 1 of 9) 490 NM_001005767 381038 Mm.371737 NM_001005767 ENSMUSG00000033918 Parl D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl presenilin associated, rhomboid-like protein-coding common_peak1_134_83_0.392831347302034_6.58873309642978_1.12393555493092 chr8 18781445 18782839 + 1.12393555493092 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -40580 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak2_134_83_0.392831347302034_6.58873309642978_1.12393555493092 chr5 137306790 137308130 + 1.12393555493092 NA 5' UTR (NM_031405, exon 1 of 20) 5' UTR (NM_031405, exon 1 of 20) 214 NM_031405 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak2_100_110_-0.424917967092693_6.58195688280376_1.12393555493089 chr8 124195595 124197071 + 1.12393555493089 NA Intergenic Intergenic -35061 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_101_110_-0.410804386359445_6.58901367317038_1.12393555493089 chr13 32924098 32925657 + 1.12393555493089 NA Intergenic Intergenic -26737 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_56_30_0.595802746385727_5.25209768357974_1.12279078807802-3 chr19 4037207 4037799 + 1.12279078807802 NA intron (NM_013541, intron 2 of 6) intron (NM_013541, intron 2 of 6) 409 NM_013541 14870 Mm.299292 NM_013541 ENSMUSG00000060803 Gstp1 GstpiB glutathione S-transferase, pi 1 protein-coding common_peak2_56_30_0.595802746385727_5.25209768357974_1.12279078807802 chr1 138619382 138619896 + 1.12279078807802 NA 5' UTR (NM_001311148, exon 1 of 8) 5' UTR (NM_001311148, exon 1 of 8) 118 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_56_30_0.595802746385727_5.25209768357974_1.12279078807802-2 chr4 138913445 138913911 + 1.12279078807802 NA exon (NM_028453, exon 1 of 8) exon (NM_028453, exon 1 of 8) 269 NM_028453 73162 Mm.238081 NM_028453 ENSMUSG00000041161 Otud3 3110030K17Rik OTU domain containing 3 protein-coding common_peak1_56_30_0.595802746385727_5.25209768357974_1.12279078807802-2 chr13 32964729 32965622 + 1.12279078807802 NA promoter-TSS (NM_011454) promoter-TSS (NM_011454) -338 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_56_30_0.595802746385727_5.25209768357974_1.12279078807802 chr1 133908675 133909439 + 1.12279078807802 NA Intergenic Intergenic -1058 NM_001160420 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding common_peak1_56_30_0.595802746385727_5.25209768357974_1.12279078807802-5 chr2 167949705 167950417 + 1.12279078807802 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 17734 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_56_30_0.595802746385727_5.25209768357974_1.12279078807802-3 chr8 70469327 70469872 + 1.12279078807802 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 7344 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_56_30_0.595802746385727_5.25209768357974_1.12279078807802-4 chr2 27858072 27858658 + 1.12279078807802 NA Intergenic Intergenic -28060 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak2_35_47_-0.693251252048452_5.23833687469693_1.12279078807801-2 chr3 14886212 14886719 + 1.12279078807801 NA 5' UTR (NM_009801, exon 1 of 7) 5' UTR (NM_009801, exon 1 of 7) 177 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding unique_peak2_35_47_-0.693251252048452_5.23833687469693_1.12279078807801 chr2 165055672 165056571 + 1.12279078807801 NA intron (NR_027852, intron 1 of 7) intron (NR_027852, intron 1 of 7) 485 NM_011611 21939 Mm.271833 NM_011611 ENSMUSG00000017652 Cd40 AI326936|Bp50|GP39|HIGM1|IGM|IMD3|T-BAM|TRAP|Tnfrsf5|p50 CD40 antigen protein-coding common_peak2_35_47_-0.693251252048452_5.23833687469693_1.12279078807801-4 chr6 122874561 122874832 + 1.12279078807801 NA intron (NM_026267, intron 1 of 7) CpG 139 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding common_peak2_35_47_-0.693251252048452_5.23833687469693_1.12279078807801-3 chr5 33343233 33343684 + 1.12279078807801 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 7886 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak2_35_47_-0.693251252048452_5.23833687469693_1.12279078807801 chr10 44078271 44079072 + 1.12279078807801 NA Intergenic Intergenic -73825 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding common_peak2_118_126_-0.384249759434828_6.79655980705475_1.12228147763065-2 chr2 154892007 154892805 + 1.12228147763065 NA intron (NM_026030, intron 1 of 8) CpG 500 NM_026030 67204 Mm.377134 NM_026030 ENSMUSG00000074656 Eif2s2 2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B eukaryotic translation initiation factor 2, subunit 2 (beta) protein-coding common_peak2_153_97_0.359069628482737_6.79424465835658_1.12228147763065 chr10 127165001 127166317 + 1.12228147763065 NA promoter-TSS (NM_001244618) promoter-TSS (NM_001244618) -172 NM_027739 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_118_126_-0.384249759434828_6.79655980705475_1.12228147763065 chr18 34330348 34332006 + 1.12228147763065 NA promoter-TSS (NM_025527) promoter-TSS (NM_025527) 32 NM_025527 66384 Mm.29452 NM_025527 ENSMUSG00000014504 Srp19 2310020D23Rik signal recognition particle 19 protein-coding common_peak2_109_118_-0.40304044153025_6.69329754254282_1.12199813317972 chr2 90917232 90918251 + 1.12199813317972 NA exon (NM_025576, exon 1 of 5) exon (NM_025576, exon 1 of 5) 309 NM_025576 66461 Mm.23926 NM_025576 Ptpmt1 1110001D10Rik|2810004N20Rik|PLIP protein tyrosine phosphatase, mitochondrial 1 protein-coding common_peak1_136_143_-0.363709427326532_6.98807028777905_1.12140477588479 chr15 66577534 66578348 + 1.12140477588479 NA intron (NM_001081409, intron 1 of 20) CpG 369 NM_001081409 239510 Mm.267473 NM_178718 ENSMUSG00000072501 Phf20l1 CGI-72|E130113K22Rik PHD finger protein 20-like 1 protein-coding common_peak1_136_143_-0.363709427326532_6.98807028777905_1.12140477588479-2 chr19 11911576 11912838 + 1.12140477588479 NA promoter-TSS (NM_172635) promoter-TSS (NM_172635) -192 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding common_peak1_174_112_0.336723969738006_6.98854094728419_1.12140477588479 chr13 63563382 63565444 + 1.12140477588479 NA intron (NM_001328514, intron 1 of 23) CpG-3956 1322 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak1_220_145_0.301394469547264_7.34052179365365_1.12109751099019 chr10 7680414 7681967 + 1.12109751099019 NA promoter-TSS (NR_033219) promoter-TSS (NR_033219) -19 NM_010690 16798 Mm.34083 NM_010690 ENSMUSG00000040021 Lats1 AW208599 large tumor suppressor protein-coding common_peak1_125_77_0.400913099811342_6.48585876876792_1.11939827949934 chr10 78425039 78426393 + 1.11939827949934 NA promoter-TSS (NM_007793) promoter-TSS (NM_007793) 46 NM_007793 13014 Mm.6095 NM_007793 ENSMUSG00000005054 Cstb AA960480|Stfb cystatin B protein-coding common_peak1_71_82_-0.490383162247464_6.12984785022319_1.11936908222805-3 chr3 21953205 21953834 + 1.11936908222805 NA Intergenic Intergenic -123133 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_71_82_-0.490383162247464_6.12984785022319_1.11936908222805 chr10 98914744 98915768 + 1.11936908222805 NA 5' UTR (NM_026482, exon 1 of 21) 5' UTR (NM_026482, exon 1 of 21) 104 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_71_82_-0.490383162247464_6.12984785022319_1.11936908222805 chr11 35954864 35955674 + 1.11936908222805 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 24820 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_71_82_-0.490383162247464_6.12984785022319_1.11936908222805-2 chr19 47579698 47580764 + 1.11936908222805 NA exon (NM_009289, exon 1 of 19) exon (NM_009289, exon 1 of 19) 212 NM_001164639 20874 Mm.281011 NM_009289 ENSMUSG00000025060 Slk 9A2|AV021402|AW411554|Etk4|SMAK|Stk2|mKIAA0204|mSLK STE20-like kinase protein-coding common_peak1_99_59_0.448353286970545_6.13106723909379_1.11936908222803 chr5 35670759 35671834 + 1.11936908222803 NA intron (NM_001042615, intron 1 of 6) intron (NM_001042615, intron 1 of 6) 8484 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak2_167_171_-0.327840017829206_7.26234474578749_1.11770055551948 chr5 145139562 145141068 + 1.11770055551948 NA promoter-TSS (NM_001033313) promoter-TSS (NM_001033313) -61 NM_001310771 231889 Mm.277413 NM_001008705 ENSMUSG00000038722 Bud31 C77604|EDG-2|EDG2|G10 BUD31 homolog protein-coding common_peak1_165_105_0.353348186754475_6.90459454794044_1.11746609340331-2 chr8 60632933 60633913 + 1.11746609340331 NA intron (NM_001293769, intron 1 of 1) CpG 598 NM_001293769 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_164_105_0.344692469441951_6.90026668928417_1.11746609340331 chr8 70672878 70674129 + 1.11746609340331 NA intron (NM_015816, intron 1 of 4) CpG 272 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_165_105_0.353348186754475_6.90459454794044_1.11746609340331 chr5 103772781 103774540 + 1.11746609340331 NA intron (NM_001080798, intron 1 of 19) B1_Mur1|SINE|Alu 19087 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-12 chr11 121721735 121722005 + 1.11707584880836 NA Intergenic Intergenic 19443 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-3 chr1 177339056 177339245 + 1.11707584880836 NA Intergenic CpG -90383 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak2_10_6_0.385930439685945_3.00032014190058_1.11707584880836-4 chr9 69884344 69884557 + 1.11707584880836 NA Intergenic Intergenic -105016 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-37 chr6 114875392 114875593 + 1.11707584880836 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 46329 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_6_9_-0.776119041948948_2.93386857391289_1.11707584880836 chr19 5013563 5013769 + 1.11707584880836 NA Intergenic ORR1F|LTR|ERVL-MaLR -10340 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-29 chr5 111153755 111153978 + 1.11707584880836 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) 149722 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-23 chr3 135268761 135268980 + 1.11707584880836 NA intron (NM_173762, intron 43 of 45) PB1D10|SINE|Alu -12351 NM_001172055 69772 Mm.45121 NM_027208 ENSMUSG00000028167 Bdh2 1810026B04Rik|Dhrs6 3-hydroxybutyrate dehydrogenase, type 2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-30 chr6 66945638 66945862 + 1.11707584880836 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) 48859 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-23 chr2 118115666 118115883 + 1.11707584880836 NA intron (NM_001313914, intron 6 of 21) intron (NM_001313914, intron 6 of 21) 3898 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-17 chr17 24070446 24070640 + 1.11707584880836 NA intron (NM_027008, intron 1 of 5) intron (NM_027008, intron 1 of 5) 2942 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-40 chr7 89675053 89675334 + 1.11707584880836 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 42375 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-36 chr6 108528370 108528581 + 1.11707584880836 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 38732 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-34 chr7 16418423 16418720 + 1.11707584880836 NA intron (NM_198631, intron 3 of 13) B3|SINE|B2 17375 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-18 chr17 34972255 34972526 + 1.11707584880836 NA promoter-TSS (NM_013558) promoter-TSS (NM_013558) -234 NM_010479 193740 Mm.6388 NM_010479 ENSMUSG00000091971 Hspa1a Hsp70-3|Hsp70.3|Hsp72|hsp68|hsp70A1 heat shock protein 1A protein-coding common_peak2_10_6_0.385930439685945_3.00032014190058_1.11707584880836 chr1 182461147 182461346 + 1.11707584880836 NA intron (NM_173378, intron 17 of 17) PB1D10|SINE|Alu 52079 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-9 chr11 67515076 67515287 + 1.11707584880836 NA Intergenic Intergenic -17817 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836 chr1 87881389 87881611 + 1.11707584880836 NA intron (NM_177646, intron 2 of 29) intron (NM_177646, intron 2 of 29) -27201 NR_136921 100503175 Mm.426422 NR_136921 ENSMUSG00000101942 Gm19582 - predicted gene, 19582 ncRNA unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-25 chr2 125930402 125930650 + 1.11707584880836 NA intron (NM_175154, intron 6 of 9) intron (NM_175154, intron 6 of 9) 64303 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-9 chr12 69743163 69743397 + 1.11707584880836 NA intron (NM_026536, intron 4 of 4) intron (NM_026536, intron 4 of 4) 18335 NM_001361690 68055 Mm.27844 NM_026536 ENSMUSG00000054894 Atp5s 1110015E18Rik|ATPW ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-9 chr4 88003708 88003999 + 1.11707584880836 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 29554 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-8 chr2 145219118 145219306 + 1.11707584880836 NA intron (NM_001356497, intron 1 of 16) intron (NM_001356497, intron 1 of 16) -23399 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-35 chr6 91741741 91742007 + 1.11707584880836 NA intron (NM_009320, intron 9 of 14) intron (NM_009320, intron 9 of 14) 57807 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-11 chr13 92041233 92041463 + 1.11707584880836 NA Intergenic Intergenic -53306 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding common_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-2 chr7 127573816 127574015 + 1.11707584880836 NA exon (NM_026888, exon 2 of 10) exon (NM_026888, exon 2 of 10) 567 NM_026888 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-6 chr10 77144205 77144429 + 1.11707584880836 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 22213 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-32 chr6 136964917 136965167 + 1.11707584880836 NA Intergenic Intergenic 10519 NM_023898 78600 Mm.290622 NM_023898 ENSMUSG00000064330 Pde6h A930033D18Rik|PDEgamma phosphodiesterase 6H, cGMP-specific, cone, gamma protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-18 chr19 19696863 19697064 + 1.11707584880836 NA Intergenic Intergenic -585767 NM_001043354 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-8 chr11 117205861 117206113 + 1.11707584880836 NA intron (NM_001113486, intron 1 of 11) intron (NM_001113486, intron 1 of 11) 6326 NM_001113486 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-20 chr18 60914457 60914673 + 1.11707584880836 NA intron (NM_001038499, intron 1 of 1) PB1|SINE|Alu 2325 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-36 chr7 114060810 114061119 + 1.11707584880836 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 56817 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-32 chr5 117182140 117182397 + 1.11707584880836 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 48680 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-27 chr5 21053484 21053742 + 1.11707584880836 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 2298 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-40 chr8 86778655 86778853 + 1.11707584880836 NA Intergenic Intergenic -32748 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-39 chr7 89337912 89338175 + 1.11707584880836 NA intron (NM_001360746, intron 2 of 14) intron (NM_001360746, intron 2 of 14) 744 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-7 chr17 75465674 75465933 + 1.11707584880836 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 265 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-19 chr18 10290669 10290948 + 1.11707584880836 NA Intergenic Intergenic -34371 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-43 chrX 133687795 133688053 + 1.11707584880836 NA 5' UTR (NM_001105246, exon 1 of 5) 5' UTR (NM_001105246, exon 1 of 5) 144 NR_153117 102632590 Mm.403836 NR_153117 ENSMUSG00000096978 Gm26851 - predicted gene, 26851 ncRNA unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-42 chrX 70385958 70386166 + 1.11707584880836 NA 5' UTR (NM_026787, exon 1 of 3) 5' UTR (NM_026787, exon 1 of 3) 149 NM_026787 68618 Mm.293255 NM_026787 ENSMUSG00000045237 1110012L19Rik - RIKEN cDNA 1110012L19 gene protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-15 chr14 31166828 31167136 + 1.11707584880836 NA intron (NM_138672, intron 1 of 68) intron (NM_138672, intron 1 of 68) 1659 NM_138672 192187 Mm.220821 NM_138672 ENSMUSG00000042286 Stab1 FEEL-1|FELE-1|MFEEL-1|MS-1|STAB-1|mKIAA0246 stabilin 1 protein-coding common_peak2_10_6_0.385930439685945_3.00032014190058_1.11707584880836-2 chr1 192066743 192066961 + 1.11707584880836 NA intron (NM_011633, intron 3 of 9) intron (NM_011633, intron 3 of 9) 25747 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-22 chr2 113508771 113509024 + 1.11707584880836 NA intron (NM_001285459, intron 3 of 16) intron (NM_001285459, intron 3 of 16) 67833 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-7 chr11 101062631 101062835 + 1.11707584880836 NA 3' UTR (NM_001243051, exon 21 of 21) 3' UTR (NM_001243051, exon 21 of 21) -7361 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-16 chr16 55494251 55494510 + 1.11707584880836 NA promoter-TSS (NR_039578) promoter-TSS (NR_039578) -351 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-2 chr1 119837706 119837915 + 1.11707584880836 NA promoter-TSS (NM_019933) promoter-TSS (NM_019933) -739 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-41 chr8 60810173 60810457 + 1.11707584880836 NA Intergenic Lx5|LINE|L1 -80078 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-4 chr10 37337891 37338106 + 1.11707584880836 NA Intergenic Intergenic -199072 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-39 chr8 81782162 81782372 + 1.11707584880836 NA intron (NM_001024617, intron 7 of 24) intron (NM_001024617, intron 7 of 24) 439705 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-24 chr4 59439224 59439477 + 1.11707584880836 NA promoter-TSS (NM_001163288) promoter-TSS (NM_001163288) -717 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-27 chr4 48576658 48576898 + 1.11707584880836 NA Intergenic L1MA8|LINE|L1 -8396 NM_001356272 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-10 chr6 83108469 83108671 + 1.11707584880836 NA promoter-TSS (NM_026744) promoter-TSS (NM_026744) -538 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-14 chr13 112450290 112450503 + 1.11707584880836 NA Intergenic Intergenic -13674 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak2_10_6_0.385930439685945_3.00032014190058_1.11707584880836-2 chr11 103265712 103265969 + 1.11707584880836 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 1561 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-17 chr17 21680284 21680554 + 1.11707584880836 NA intron (NM_001354753, intron 1 of 5) intron (NM_001354753, intron 1 of 5) 542 NM_001354753 100310809 Mm.293030 NM_001354753 Gm10509 - predicted gene 10509 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-34 chr6 38434946 38435147 + 1.11707584880836 NA intron (NM_177185, intron 1 of 16) intron (NM_177185, intron 1 of 16) 1121 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding common_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836 chr2 125356165 125356484 + 1.11707584880836 NA intron (NM_007993, intron 32 of 65) (TG)n|Simple_repeat|Simple_repeat 108809 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-30 chr5 43789383 43789608 + 1.11707584880836 NA Intergenic Intergenic -7346 NM_178729 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-5 chr16 57551646 57551885 + 1.11707584880836 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 2523 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-28 chr4 55531034 55531261 + 1.11707584880836 NA intron (NM_010637, intron 2 of 4) CpG 1328 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-7 chr10 80407043 80407321 + 1.11707584880836 NA promoter-TSS (NM_025650) promoter-TSS (NM_025650) -361 NM_025650 66594 Mm.379119 NM_025650 ENSMUSG00000020163 Uqcr11 0710008D09Rik|AL022707|Uqcr ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-14 chr15 55040749 55041002 + 1.11707584880836 NA intron (NM_001081288, intron 17 of 25) intron (NM_001081288, intron 17 of 25) 31277 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-29 chr4 156031128 156031336 + 1.11707584880836 NA Intergenic Intergenic 4910 NM_021985 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-6 chr11 96289386 96289598 + 1.11707584880836 NA exon (NM_010460, exon 2 of 2) exon (NM_010460, exon 2 of 2) 2846 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-33 chr6 146917813 146918042 + 1.11707584880836 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 29433 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-19 chr2 65171088 65171286 + 1.11707584880836 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 67439 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-21 chr2 117093844 117094085 + 1.11707584880836 NA Intergenic Intergenic -27107 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-37 chr7 129691295 129691544 + 1.11707584880836 NA Intergenic Intergenic 99556 NM_172255 207425 Mm.229323 NM_172255 ENSMUSG00000042055 Wdr11 2900055P10Rik|AW489876|Brwd2|mKIAA1351 WD repeat domain 11 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-2 chr1 156939036 156939229 + 1.11707584880836 NA intron (NM_001357391, intron 1 of 19) CpG 255 NM_001159966 78255 Mm.28376 NM_023884 ENSMUSG00000026594 Ralgps2 1810020P17Rik|2210408F11Rik|4921528G01Rik|9130014M22Rik|AU043409|AW046161 Ral GEF with PH domain and SH3 binding motif 2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-11 chr11 117958698 117958895 + 1.11707584880836 NA Intergenic Intergenic 10570 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding unique_peak2_10_6_0.385930439685945_3.00032014190058_1.11707584880836 chr11 60301018 60301283 + 1.11707584880836 NA intron (NM_001359810, intron 1 of 12) L1MC5|LINE|L1 51755 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-24 chr2 122703851 122704067 + 1.11707584880836 NA Intergenic Intergenic -1296 NM_001290993 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-41 chr8 124068133 124068445 + 1.11707584880836 NA Intergenic Intergenic 44816 NM_001029876 382038 Mm.334891 NM_001029876 ENSMUSG00000031976 Urb2 C77575|mKIAA0133 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-38 chr8 8603761 8603972 + 1.11707584880836 NA Intergenic Intergenic 56907 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-28 chr5 93127043 93127245 + 1.11707584880836 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 33728 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-22 chr2 163386680 163386886 + 1.11707584880836 NA intron (NM_021566, intron 1 of 5) (GGGA)n|Simple_repeat|Simple_repeat 11190 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-5 chr10 24973083 24973290 + 1.11707584880836 NA Intergenic Intergenic -45716 NM_007482 11846 Mm.154144 NM_007482 ENSMUSG00000019987 Arg1 AI|AI256583|Arg-1|PGIF arginase, liver protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-16 chr16 57557086 57557367 + 1.11707584880836 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 7984 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-33 chr6 17073161 17073386 + 1.11707584880836 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 8124 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_10_6_0.385930439685945_3.00032014190058_1.11707584880836-3 chr9 13300232 13300484 + 1.11707584880836 NA Intergenic Intergenic 53402 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-4 chr11 106135274 106135489 + 1.11707584880836 NA intron (NM_011947, intron 6 of 15) intron (NM_011947, intron 6 of 15) 24546 NM_001356459 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-21 chr2 109959348 109959624 + 1.11707584880836 NA intron (NM_172671, intron 1 of 17) intron (NM_172671, intron 1 of 17) 41839 NM_172671 107515 Mm.277351 NM_172671 ENSMUSG00000050199 Lgr4 9130225G07|A330106J01Rik|A930009A08Rik|Gpr48 leucine-rich repeat-containing G protein-coupled receptor 4 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-20 chr2 102544628 102544852 + 1.11707584880836 NA Intergenic Intergenic -5281 NM_173749 210622 Mm.28649 NM_173749 ENSMUSG00000027188 Pamr1 5930437L24|E430002G05Rik|Ramp peptidase domain containing associated with muscle regeneration 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-10 chr11 100623842 100624139 + 1.11707584880836 NA intron (NM_028024, intron 1 of 3) intron (NM_028024, intron 1 of 3) 1035 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-15 chr16 10837475 10837680 + 1.11707584880836 NA intron (NM_001162932, intron 1 of 1) intron (NM_001162932, intron 1 of 1) 2518 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-4 chr1 163574168 163574402 + 1.11707584880836 NA Intergenic Intergenic 150947 NM_001143956 240879 Mm.484621 NM_001143956 ENSMUSG00000040113 Mettl11b Gm207|NTM1B methyltransferase like 11B protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-25 chr4 137480674 137480871 + 1.11707584880836 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 11969 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836 chr1 192066761 192067000 + 1.11707584880836 NA intron (NM_011633, intron 3 of 9) intron (NM_011633, intron 3 of 9) 25719 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836 chr1 149833699 149833926 + 1.11707584880836 NA intron (NM_008869, intron 17 of 17) intron (NM_008869, intron 17 of 17) 88627 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-38 chr7 45091717 45091981 + 1.11707584880836 NA intron (NM_001355045, intron 1 of 6) intron (NM_001355045, intron 1 of 6) 364 NM_026555 52377 Mm.29997 NM_026555 ENSMUSG00000019539 Rcn3 6030455P07Rik|D530026G20Rik|D7Ertd671e|RLP49 reticulocalbin 3, EF-hand calcium binding domain protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-26 chr3 86998881 86999113 + 1.11707584880836 NA intron (NM_007639, intron 1 of 5) intron (NM_007639, intron 1 of 5) 343 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-31 chr6 115989338 115989554 + 1.11707584880836 NA intron (NM_026376, intron 1 of 35) intron (NM_026376, intron 1 of 35) 5559 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-11 chr7 27838224 27838428 + 1.11707584880836 NA promoter-TSS (NM_011762) promoter-TSS (NM_011762) -258 NM_011762 22717 Mm.379046 NM_011762 ENSMUSG00000078779 Zfp59 Mfg-2|Mfg2 zinc finger protein 59 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-12 chr14 7902081 7902297 + 1.11707584880836 NA intron (NM_001081427, intron 19 of 45) intron (NM_001081427, intron 19 of 45) 84232 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-3 chr11 70667772 70667959 + 1.11707584880836 NA intron (NM_001167669, intron 1 of 6) intron (NM_001167669, intron 1 of 6) 1551 NM_172561 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-13 chr13 15880164 15880370 + 1.11707584880836 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 73024 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-31 chr5 113477094 113477437 + 1.11707584880836 NA Intergenic Intergenic -73155 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-35 chr7 90390319 90390615 + 1.11707584880836 NA intron (NM_001040088, intron 2 of 9) intron (NM_001040088, intron 2 of 9) 3486 NM_001040088 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-26 chr4 139574002 139574259 + 1.11707584880836 NA promoter-TSS (NM_001205173) promoter-TSS (NM_001205173) -590 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-6 chr17 25569780 25569989 + 1.11707584880836 NA promoter-TSS (NR_045176) promoter-TSS (NR_045176) 802 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-5 chr10 58354871 58355168 + 1.11707584880836 NA intron (NM_001359116, intron 1 of 9) intron (NM_001359116, intron 1 of 9) 3056 NM_001359116 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-13 chr14 34763248 34763475 + 1.11707584880836 NA Intergenic C-rich|Low_complexity|Low_complexity -56775 NM_008166 14803 Mm.121569 NM_008166 ENSMUSG00000041078 Grid1 GluD1|GluRdelta1 glutamate receptor, ionotropic, delta 1 protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-42 chr9 50500809 50501016 + 1.11707584880836 NA intron (NM_029639, intron 2 of 3) intron (NM_029639, intron 2 of 3) 3893 NR_040714 69631 Mm.414996 NR_040714 ENSMUSG00000101304 Plet1os 2310014F07Rik placenta expressed transcript 1, opposite strand ncRNA common_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-2 chr11 51881404 51881606 + 1.11707584880836 NA Intergenic Intergenic -23875 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-3 chr1 138351668 138351884 + 1.11707584880836 NA Intergenic Intergenic 78038 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak2_6_9_-0.776119041948948_2.93386857391289_1.11707584880836-10 chr13 8886154 8886360 + 1.11707584880836 NA intron (NM_145360, intron 1 of 4) intron (NM_145360, intron 1 of 4) 651 NM_145360 319554 Mm.29847 NM_145360 ENSMUSG00000058258 Idi1 4832416K17Rik|IPPI1 isopentenyl-diphosphate delta isomerase protein-coding unique_peak1_10_6_0.385930439685945_3.00032014190058_1.11707584880836-8 chr10 120715652 120715843 + 1.11707584880836 NA Intergenic Intergenic -49985 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_246_164_0.284229411390161_7.5084369199409_1.11688150774453 chr11 120254249 120256317 + 1.11688150774453 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 22336 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_86_96_-0.444164218582407_6.37783073289592_1.11676972075534-2 chr6 99094785 99096219 + 1.11676972075534 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -67204 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_86_96_-0.444164218582407_6.37783073289592_1.11676972075534 chr5 93205704 93206377 + 1.11676972075534 NA promoter-TSS (NM_029363) promoter-TSS (NM_029363) 455 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak2_86_96_-0.444164218582407_6.37783073289592_1.11676972075534 chr11 62280977 62282057 + 1.11676972075534 NA promoter-TSS (NM_029704) promoter-TSS (NM_029704) 44 NM_029704 72795 Mm.489722 NM_028360 ENSMUSG00000042298 Ttc19 2010204O13Rik|2810460C24Rik|AI505442 tetratricopeptide repeat domain 19 protein-coding common_peak1_117_71_0.422421104307123_6.38113555359587_1.11676972075532-2 chr14 52196558 52197712 + 1.11676972075532 NA exon (NM_033618, exon 1 of 26) exon (NM_033618, exon 1 of 26) 104 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding common_peak1_116_71_0.410229397894466_6.37503970038954_1.11676972075532 chr10 82985446 82986898 + 1.11676972075532 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 675 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_117_71_0.422421104307123_6.38113555359587_1.11676972075532 chr11 3436861 3438717 + 1.11676972075532 NA intron (NM_001290473, intron 1 of 5) intron (NM_001290473, intron 1 of 5) -14648 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA common_peak2_117_71_0.422421104307123_6.38113555359587_1.11676972075532 chr11 88047713 88048708 + 1.11676972075532 NA intron (NM_001078167, intron 1 of 2) CpG 837 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding common_peak1_117_71_0.422421104307123_6.38113555359587_1.11676972075532-3 chr19 44755080 44756332 + 1.11676972075532 NA Intergenic CpG -1688 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_108_65_0.434300765769993_6.26154450224345_1.11653709228457-2 chr18 77947876 77948724 + 1.11653709228457 NA exon (NM_001195633, exon 2 of 44) exon (NM_001195633, exon 2 of 44) 9833 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_108_65_0.434300765769993_6.26154450224345_1.11653709228457-3 chr3 90254267 90255182 + 1.11653709228457 NA intron (NM_001357152, intron 1 of 9) intron (NM_001357152, intron 1 of 9) 866 NM_001357152 74343 Mm.35627 NM_028881 ENSMUSG00000027936 Crtc2 4632407F12Rik|Torc2 CREB regulated transcription coactivator 2 protein-coding common_peak1_78_89_-0.474285430054398_6.25471038130248_1.11653709228457 chr17 33628922 33629997 + 1.11653709228457 NA intron (NM_026712, intron 1 of 5) intron (NM_026712, intron 1 of 5) 367 NM_026712 328801 Mm.181488 NM_026712 ENSMUSG00000073423 Zfp414 0610030H11Rik|Znf414 zinc finger protein 414 protein-coding common_peak1_108_65_0.434300765769993_6.26154450224345_1.11653709228457-4 chr8 31401431 31402595 + 1.11653709228457 NA Intergenic Intergenic 34264 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_108_65_0.434300765769993_6.26154450224345_1.11653709228457 chr16 45952459 45953570 + 1.11653709228457 NA intron (NR_152227, intron 2 of 2) intron (NR_152227, intron 2 of 2) 7408 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak2_276_268_-0.256702519240708_7.94311110293627_1.11647802910438 chr11 86756003 86759510 + 1.11647802910438 NA promoter-TSS (NM_001356393) promoter-TSS (NM_001356393) -189 NM_001356393 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding common_peak1_234_155_0.293806024047195_7.43230523088585_1.11586467381191 chr7 139247730 139250791 + 1.11586467381191 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 778 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_102_111_-0.409767556999377_6.60247114355792_1.11544060896629 chr11 59384780 59386157 + 1.11544060896629 NA Intergenic Intergenic -9815 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_135_84_0.386329962052262_6.60255591716383_1.11544060896629 chr13 92530037 92531384 + 1.11544060896629 NA promoter-TSS (NM_173392) promoter-TSS (NM_173392) 100 NM_173392 218441 Mm.259585 NM_173392 ENSMUSG00000021706 Zfyve16 AI035632|B130024H06Rik|B130031L15|mKIAA0305 zinc finger, FYVE domain containing 16 protein-coding common_peak1_300_204_0.254311521131627_7.80663586007126_1.1151357624933 chr7 140855031 140858315 + 1.1151357624933 NA promoter-TSS (NM_018742) promoter-TSS (NM_018742) -290 NM_018742 54399 Mm.155696 NM_018742 ENSMUSG00000025484 Bet1l 2610021K23Rik|Gs15 Bet1 golgi vesicular membrane trafficking protein like protein-coding common_peak1_176_113_0.340291693812148_7.00303586107082_1.11498916050683 chr8 105964889 105966338 + 1.11498916050683 NA intron (NR_045594, intron 1 of 23) intron (NR_045594, intron 1 of 23) 502 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak1_155_98_0.362907197456471_6.81081021880784_1.11494042427421 chr11 86606548 86607903 + 1.11494042427421 NA exon (NM_029478, exon 9 of 12) exon (NM_029478, exon 9 of 12) -23067 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_119_127_-0.383577413947359_6.80821129302632_1.11494042427421 chr17 17373537 17375188 + 1.11494042427421 NA promoter-TSS (NM_025934) promoter-TSS (NM_025934) 30 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 protein-coding common_peak1_154_98_0.353694838653807_6.80620403940651_1.11494042427421 chr8 121590104 121591555 + 1.11494042427421 NA intron (NM_026160, intron 1 of 3) CpG 361 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak1_70_39_0.542692646819368_5.59327441829705_1.11442465192823-3 chr2 27318054 27318603 + 1.11442465192823 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -71025 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_46_58_-0.608981746059787_5.57815217633195_1.11442465192823 chr5 125406316 125407026 + 1.11442465192823 NA Intergenic Intergenic -16654 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_46_58_-0.608981746059787_5.57815217633195_1.11442465192823-2 chr9 97110513 97111124 + 1.11442465192823 NA intron (NM_138756, intron 1 of 6) CpG 223 NM_138756 192287 Mm.228067 NM_138756 ENSMUSG00000032449 Slc25a36 C330005L02Rik solute carrier family 25, member 36 protein-coding common_peak1_70_39_0.542692646819368_5.59327441829705_1.11442465192823 chr1 87959772 87960625 + 1.11442465192823 NA intron (NM_001033291, intron 19 of 27) intron (NM_001033291, intron 19 of 27) 48353 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding common_peak2_70_39_0.542692646819368_5.59327441829705_1.11442465192823 chr12 55199601 55200195 + 1.11442465192823 NA intron (NM_028527, intron 1 of 4).2 CpG 306 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_46_58_-0.608981746059787_5.57815217633195_1.11442465192823-2 chr8 106193412 106194143 + 1.11442465192823 NA intron (NM_001357381, intron 6 of 9) PB1D9|SINE|Alu 17156 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak1_70_39_0.542692646819368_5.59327441829705_1.11442465192823-2 chr15 62120662 62121133 + 1.11442465192823 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 81640 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_46_58_-0.608981746059787_5.57815217633195_1.11442465192823 chr2 32287456 32287990 + 1.11442465192823 NA promoter-TSS (NM_133852) promoter-TSS (NM_133852) 346 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding common_peak1_110_119_-0.402149231896866_6.70581597966009_1.11413229790769 chr8 24569088 24570649 + 1.11413229790769 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 6465 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_145_91_0.37379849993567_6.71046120602485_1.11413229790769 chr12 85338221 85339736 + 1.11413229790769 NA intron (NM_145138, intron 1 of 21) CpG 384 NM_145138 217718 Mm.29071 NM_145138 ENSMUSG00000034290 Nek9 C130021H08Rik NIMA (never in mitosis gene a)-related expressed kinase 9 protein-coding common_peak1_315_215_0.24857020496532_7.87917260464613_1.11364617177155 chr16 11252679 11255201 + 1.11364617177155 NA TTS (NR_035466) TTS (NR_035466) 385 NM_001130008 14852 Mm.325827 NM_146066 ENSMUSG00000062203 Gspt1 AI314175|AI326449|AV307676|C79774|G1st|Gst-1 G1 to S phase transition 1 protein-coding common_peak1_65_76_-0.506775535870386_6.01339877275971_1.11338967587319-2 chr13 70723666 70724455 + 1.11338967587319 NA Intergenic Intergenic -86426 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_65_76_-0.506775535870386_6.01339877275971_1.11338967587319 chr10 68247716 68248410 + 1.11338967587319 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 30663 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_92_54_0.469925428255577_6.01632242765245_1.11338967587319 chr13 115101908 115103048 + 1.11338967587319 NA promoter-TSS (NM_001033228) promoter-TSS (NM_001033228) -514 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409 chr1 64940695 64941046 + 1.11267835143409 NA intron (NM_001039493, intron 1 of 7) (TC)n|Simple_repeat|Simple_repeat 15954 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-27 chr6 113480223 113480475 + 1.11267835143409 NA exon (NM_134159, exon 13 of 17) exon (NM_134159, exon 13 of 17) -3007 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak1_12_22_-1.09096880202866_3.97807755504269_1.11267835143409 chr17 66960253 66960581 + 1.11267835143409 NA intron (NM_001357625, intron 7 of 32) intron (NM_001357625, intron 7 of 32) 65818 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409 chr1 93680433 93680657 + 1.11267835143409 NA Intergenic Intergenic -5030 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-4 chr2 85049612 85050063 + 1.11267835143409 NA promoter-TSS (NM_001081260) promoter-TSS (NM_001081260) -623 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-11 chr16 6885755 6886422 + 1.11267835143409 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -153282 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-8 chr6 112282156 112282358 + 1.11267835143409 NA intron (NM_144799, intron 1 of 5) intron (NM_144799, intron 1 of 5) 8062 NR_045987 100503613 Mm.136719 NM_177012 5031434C07Rik - RIKEN cDNA 5031434C07 gene ncRNA unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-10 chr5 149583714 149584162 + 1.11267835143409 NA intron (NM_029440, intron 13 of 22) intron (NM_029440, intron 13 of 22) -45908 NR_045423 100415916 Mm.145528 NR_045423 ENSMUSG00000107132 Gm15997 - predicted gene 15997 ncRNA unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-16 chr19 43631234 43631525 + 1.11267835143409 NA Intergenic Intergenic 10628 NR_152201 100043245 Mm.402688 NR_152201 Gm4311 - predicted gene 4311 ncRNA unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-14 chr8 82914382 82914656 + 1.11267835143409 NA intron (NM_177378, intron 1 of 6) intron (NM_177378, intron 1 of 6) 51163 NM_177378 330812 Mm.491438 NM_177378 ENSMUSG00000047747 Rnf150 A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214 ring finger protein 150 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-6 chr3 66209106 66209412 + 1.11267835143409 NA intron (NM_145820, intron 5 of 13) intron (NM_145820, intron 5 of 13) -10628 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-4 chr15 89149305 89149545 + 1.11267835143409 NA exon (NM_011161, exon 1 of 12) exon (NM_011161, exon 1 of 12) 181 NM_011161 19094 Mm.91969 NM_011161 ENSMUSG00000053137 Mapk11 P38b|Prkm11|Sapk2|Sapk2b|p38-2|p38beta|p38beta2 mitogen-activated protein kinase 11 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-13 chr7 94818655 94818986 + 1.11267835143409 NA Intergenic Intergenic -1352424 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding common_peak2_26_11_0.894639329752247_4.03228216559728_1.11267835143409-2 chr15 62283814 62284121 + 1.11267835143409 NA Intergenic Intergenic -64516 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-3 chr13 59656088 59656375 + 1.11267835143409 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 19553 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-17 chr2 24443067 24443530 + 1.11267835143409 NA intron (NM_011040, intron 3 of 11) intron (NM_011040, intron 3 of 11) 32301 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-2 chr11 54883022 54883304 + 1.11267835143409 NA Intergenic PB1D10|SINE|Alu 16780 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-2 chr12 103682922 103683197 + 1.11267835143409 NA Intergenic Intergenic -6297 NM_001310472 194604 NM_001310472 ENSMUSG00000071179 Serpina16 Gm46 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 protein-coding common_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-5 chr6 37723758 37724010 + 1.11267835143409 NA Intergenic Intergenic -146927 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-5 chr17 40877320 40877790 + 1.11267835143409 NA intron (NM_027834, intron 1 of 1) MIR|SINE|MIR 3003 NM_027834 71583 Mm.158733 NM_027834 ENSMUSG00000054951 9130008F23Rik - RIKEN cDNA 9130008F23 gene protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-6 chr13 23570624 23571000 + 1.11267835143409 NA promoter-TSS (NM_178196) promoter-TSS (NM_178196) 408 NM_178187 319166 Mm.261665 NM_178187 ENSMUSG00000069272 Hist1h2ae 1190022L06 histone cluster 1, H2ae protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-12 chr7 74171901 74172417 + 1.11267835143409 NA Intergenic Intergenic -158477 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-11 chr7 49334112 49334624 + 1.11267835143409 NA intron (NM_175272, intron 1 of 37) LFSINE_Vert|SINE|tRNA 88179 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-29 chr8 106718898 106719294 + 1.11267835143409 NA intron (NM_173037, intron 9 of 17) intron (NM_173037, intron 9 of 17) 36028 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-18 chr2 119174170 119174666 + 1.11267835143409 NA promoter-TSS (NM_001039223) promoter-TSS (NM_001039223) -91 NM_001039223 623781 Mm.389344 NM_001039223 ENSMUSG00000055926 Gm14137 - predicted gene 14137 protein-coding common_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-4 chr4 95759820 95760144 + 1.11267835143409 NA intron (NM_029347, intron 7 of 10) intron (NM_029347, intron 7 of 10) 180561 NM_029347 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409 chr10 80675803 80676144 + 1.11267835143409 NA intron (NM_021462, intron 1 of 13) CpG-1308 320 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_26_11_0.894639329752247_4.03228216559728_1.11267835143409 chr1 40271554 40271811 + 1.11267835143409 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 5096 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-19 chr3 104441840 104442123 + 1.11267835143409 NA Intergenic Intergenic 69937 NM_001025067 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-24 chr5 125247991 125248688 + 1.11267835143409 NA Intergenic Intergenic -69125 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-31 chr8 110754557 110754850 + 1.11267835143409 NA intron (NM_029646, intron 2 of 7) intron (NM_029646, intron 2 of 7) 28977 NM_001310591 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-10 chr16 5136310 5136664 + 1.11267835143409 NA Intergenic Intergenic -4006 NM_008909 19041 Mm.266875 NM_008909 ENSMUSG00000039457 Ppl AW553870 periplakin protein-coding common_peak1_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-2 chr7 6363398 6363599 + 1.11267835143409 NA intron (NM_177888, intron 1 of 4) CpG 190 NM_001112805 330463 Mm.136456 NM_177888 ENSMUSG00000055150 Zfp78 A330079D15|KRAB12|Zfp77 zinc finger protein 78 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-21 chr4 119310416 119310983 + 1.11267835143409 NA TTS (NM_001110130) TTS (NM_001110130) 9824 NM_001110129 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding common_peak1_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-3 chr8 18699508 18699761 + 1.11267835143409 NA intron (NM_007426, intron 5 of 8) intron (NM_007426, intron 5 of 8) 41928 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-9 chr4 107186362 107186696 + 1.11267835143409 NA intron (NM_029565, intron 2 of 7) intron (NM_029565, intron 2 of 7) 7899 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-8 chr14 21586768 21587122 + 1.11267835143409 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 87160 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-2 chr13 6420057 6420285 + 1.11267835143409 NA Intergenic Intergenic -127986 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-10 chr9 57625230 57625557 + 1.11267835143409 NA Intergenic Intergenic -4619 NM_199222 235416 Mm.295630 NM_199222 ENSMUSG00000056271 Lman1l BC020188|slamp lectin, mannose-binding 1 like protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-30 chr8 109799379 109799712 + 1.11267835143409 NA intron (NM_001301211, intron 1 of 22) intron (NM_001301211, intron 1 of 22) 20962 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-3 chr16 11012261 11012636 + 1.11267835143409 NA intron (NR_040518, intron 2 of 2) intron (NR_040518, intron 2 of 2) 3550 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-5 chr11 94314572 94314862 + 1.11267835143409 NA intron (NM_001361574, intron 1 of 9) intron (NM_001361574, intron 1 of 9) 7246 NR_155069 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-5 chr2 137723837 137724244 + 1.11267835143409 NA Intergenic Intergenic -532544 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-12 chr16 55519985 55520275 + 1.11267835143409 NA Intergenic Intergenic 25399 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-26 chr6 17408717 17409097 + 1.11267835143409 NA Intergenic Intergenic -55050 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-20 chr3 121548609 121548986 + 1.11267835143409 NA Intergenic Intergenic -16453 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-2 chr11 12411444 12411783 + 1.11267835143409 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 527 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-13 chr17 56073969 56074419 + 1.11267835143409 NA intron (NM_024432, intron 2 of 11) intron (NM_024432, intron 2 of 11) 5139 NM_024432 66530 Mm.28000 NM_024432 ENSMUSG00000019578 Ubxn6 1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2 UBX domain protein 6 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-7 chr3 107737458 107737718 + 1.11267835143409 NA Intergenic Intergenic 22881 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-4 chr9 87464536 87464789 + 1.11267835143409 NA Intergenic Intergenic -209130 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-9 chr14 65882851 65883138 + 1.11267835143409 NA Intergenic Intergenic 45692 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-23 chr5 66614815 66615450 + 1.11267835143409 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 3685 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-25 chr5 137530766 137531147 + 1.11267835143409 NA intron (NM_010312, intron 1 of 9) CpG -1362 NR_105846 102465227 NR_105846 ENSMUSG00000098597 Mir6418 Gm27629|mir-6418|mmu-mir-6418 microRNA 6418 ncRNA unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-3 chr11 83564072 83564426 + 1.11267835143409 NA Intergenic Intergenic 14387 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-9 chr7 67549063 67549264 + 1.11267835143409 NA intron (NR_028144, intron 5 of 8) intron (NR_028144, intron 5 of 8) 96073 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-32 chr8 110919091 110919552 + 1.11267835143409 NA promoter-TSS (NM_009179) promoter-TSS (NM_009179) -544 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409 chr12 9219385 9219809 + 1.11267835143409 NA Intergenic Intergenic 189600 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-22 chr5 24423182 24423463 + 1.11267835143409 NA intron (NM_007668, intron 1 of 11) intron (NM_007668, intron 1 of 11) 208 NM_007668 12568 Mm.298798 NM_007668 ENSMUSG00000028969 Cdk5 AW048668|Crk6 cyclin-dependent kinase 5 protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-6 chr4 84204570 84204978 + 1.11267835143409 NA Intergenic Intergenic -159895 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-33 chr9 96860011 96860415 + 1.11267835143409 NA intron (NM_001289647, intron 1 of 5) intron (NM_001289647, intron 1 of 5) 29261 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-14 chr19 28300829 28301223 + 1.11267835143409 NA intron (NM_175459, intron 7 of 10) intron (NM_175459, intron 7 of 10) -289860 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-7 chr13 50978045 50978375 + 1.11267835143409 NA Intergenic Intergenic 122517 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-3 chr11 121703805 121704108 + 1.11267835143409 NA intron (NM_144797, intron 1 of 3) intron (NM_144797, intron 1 of 3) 1529 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-15 chr19 37957435 37957757 + 1.11267835143409 NA intron (NM_001302140, intron 21 of 53) intron (NM_001302140, intron 21 of 53) 85981 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-7 chr5 66150531 66150913 + 1.11267835143409 NA 5' UTR (NM_001291226, exon 1 of 6) 5' UTR (NM_001291226, exon 1 of 6) 256 NM_001291226 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-28 chr7 35235009 35235238 + 1.11267835143409 NA Intergenic Intergenic -19778 NM_001024707 435965 Mm.333783 NM_001024707 ENSMUSG00000001802 Lrp3 - low density lipoprotein receptor-related protein 3 protein-coding unique_peak2_12_22_-1.09096880202866_3.97807755504269_1.11267835143409-8 chr4 45527622 45528051 + 1.11267835143409 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 2992 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_26_11_0.894639329752247_4.03228216559728_1.11267835143409-4 chr11 83819720 83820165 + 1.11267835143409 NA Intergenic Intergenic -30927 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_426_297_0.215536639268356_8.32693684009634_1.11265724684185 chr8 70462074 70465061 + 1.11265724684185 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 13376 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_214_213_-0.289677516584324_7.59662822810898_1.11047283528892 chr15 25622622 25624256 + 1.11047283528892 NA intron (NM_019472, intron 1 of 40) CpG 889 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_126_78_0.393858873396812_6.50071018487551_1.11034289015559-2 chr2 167570178 167571321 + 1.11034289015559 NA Intergenic PB1D7|SINE|Alu 32554 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_126_78_0.393858873396812_6.50071018487551_1.11034289015559 chr1 155214206 155215081 + 1.11034289015559 NA Intergenic Intergenic 55940 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_126_78_0.393858873396812_6.50071018487551_1.11034289015559-3 chr9 66591837 66593004 + 1.11034289015559 NA intron (NM_144937, intron 1 of 14) CpG 695 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-10 chr8 41239132 41239463 + 1.11025669535346 NA promoter-TSS (NM_023662) promoter-TSS (NM_023662) -462 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding common_peak1_27_38_-0.753703125070324_4.90855065632709_1.11025669535346-4 chr7 143986621 143987046 + 1.11025669535346 NA Intergenic Intergenic -22421 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_45_23_0.657890801075099_4.91390790125871_1.11025669535346-2 chr15 31236179 31236569 + 1.11025669535346 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 11989 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-5 chr3 121644172 121644681 + 1.11025669535346 NA promoter-TSS (NR_036456) promoter-TSS (NR_036456) -941 NR_036457 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-2 chr16 57688412 57688989 + 1.11025669535346 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 66037 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_27_38_-0.753703125070324_4.90855065632709_1.11025669535346 chr4 149166298 149166537 + 1.11025669535346 NA promoter-TSS (NM_001356332) promoter-TSS (NM_001356332) 288 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak1_27_38_-0.753703125070324_4.90855065632709_1.11025669535346-3 chr17 29032207 29032450 + 1.11025669535346 NA promoter-TSS (NM_013663) promoter-TSS (NM_013663) -332 NM_013663 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding common_peak1_27_38_-0.753703125070324_4.90855065632709_1.11025669535346-2 chr17 12119396 12119959 + 1.11025669535346 NA intron (NM_026644, intron 1 of 8) intron (NM_026644, intron 1 of 8) 393 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak2_27_38_-0.753703125070324_4.90855065632709_1.11025669535346-3 chr9 113729976 113730576 + 1.11025669535346 NA Intergenic Intergenic -11197 NM_001286599 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak1_27_38_-0.753703125070324_4.90855065632709_1.11025669535346 chr1 82282696 82283226 + 1.11025669535346 NA intron (NM_010570, intron 1 of 1) intron (NM_010570, intron 1 of 1) 8478 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-4 chr2 151921748 151922440 + 1.11025669535346 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 10887 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-8 chr7 34912503 34912921 + 1.11025669535346 NA intron (NM_008820, intron 1 of 14) intron (NM_008820, intron 1 of 14) 305 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak2_45_23_0.657890801075099_4.91390790125871_1.11025669535346 chr1 183145826 183146479 + 1.11025669535346 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 1405 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak2_27_38_-0.753703125070324_4.90855065632709_1.11025669535346 chr7 73607925 73608723 + 1.11025669535346 NA Intergenic Intergenic -49929 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-9 chr7 127014089 127014582 + 1.11025669535346 NA TTS (NM_030240) TTS (NM_030240) 259 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-6 chr4 46195705 46196263 + 1.11025669535346 NA intron (NM_011728, intron 1 of 5) CpG 327 NM_011728 22590 Mm.247036 NM_011728 ENSMUSG00000028329 Xpa AI573865|Xpac xeroderma pigmentosum, complementation group A protein-coding common_peak2_27_38_-0.753703125070324_4.90855065632709_1.11025669535346-2 chr7 82405736 82406330 + 1.11025669535346 NA intron (NM_001190374, intron 3 of 29) intron (NM_001190374, intron 3 of 29) 70339 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-3 chr18 39381311 39381783 + 1.11025669535346 NA Intergenic Intergenic 105698 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-2 chr3 107706817 107707392 + 1.11025669535346 NA Intergenic (TTG)n|Simple_repeat|Simple_repeat -10544 NM_145542 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346 chr10 71119137 71119586 + 1.11025669535346 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 40329 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346-7 chr6 50377147 50377734 + 1.11025669535346 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 5397 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_45_23_0.657890801075099_4.91390790125871_1.11025669535346 chr10 95003468 95003984 + 1.11025669535346 NA Intergenic Intergenic -59148 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_59_70_-0.526269553878797_5.88661234256528_1.10998179636175-2 chr18 66328834 66329568 + 1.10998179636175 NA Intergenic Intergenic -37363 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_59_70_-0.526269553878797_5.88661234256528_1.10998179636175-3 chr2 117652846 117653721 + 1.10998179636175 NA Intergenic Intergenic 159519 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_59_70_-0.526269553878797_5.88661234256528_1.10998179636175 chr12 80111036 80111913 + 1.10998179636175 NA intron (NM_007564, intron 1 of 1) intron (NM_007564, intron 1 of 1) 1539 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak1_85_49_0.495331360861464_5.89152187020546_1.10998179636174 chr16 20620863 20621984 + 1.10998179636174 NA promoter-TSS (NM_028420) promoter-TSS (NM_028420) -145 NM_028420 73047 Mm.425977 NM_028420 ENSMUSG00000051146 Camk2n2 2900075A18Rik calcium/calmodulin-dependent protein kinase II inhibitor 2 protein-coding unique_peak1_84_49_0.478576586742362_5.88314448314591_1.10998179636174 chr1 132292898 132293685 + 1.10998179636174 NA Intergenic Intergenic -5335 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak2_85_49_0.495331360861464_5.89152187020546_1.10998179636174 chr10 111539732 111540583 + 1.10998179636174 NA Intergenic Intergenic 33871 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_84_49_0.478576586742362_5.88314448314591_1.10998179636174 chr11 3649200 3650054 + 1.10998179636174 NA promoter-TSS (NR_002321) promoter-TSS (NR_002321) 133 NM_001159288 74522 Mm.139127 NM_198162 ENSMUSG00000034543 Morc2a 8430403M08Rik|Zcwcc1 microrchidia 2A protein-coding common_peak1_85_49_0.495331360861464_5.89152187020546_1.10998179636174 chr17 87827442 87828327 + 1.10998179636174 NA Intergenic Intergenic -29890 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_53_64_-0.549820962128295_5.74745733196431_1.10994003514438 chr4 121214706 121215121 + 1.10994003514438 NA exon (NM_001346660, exon 1 of 8) exon (NM_001346660, exon 1 of 8) 171 NM_001346660 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak2_52_64_-0.576597757758594_5.73406893414916_1.10994003514438-3 chr8 26361907 26362518 + 1.10994003514438 NA Intergenic Intergenic 204043 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak2_53_64_-0.549820962128295_5.74745733196431_1.10994003514438-3 chr6 145249191 145250281 + 1.10994003514438 NA promoter-TSS (NR_045598) promoter-TSS (NR_045598) 495 NM_021284 16653 Mm.383182 NM_021284 ENSMUSG00000030265 Kras AI929937|K-Ras|K-Ras 2|K-ras|Ki-ras|Kras-2|Kras2|c-K-ras|c-Ki-ras|p21B|ras Kirsten rat sarcoma viral oncogene homolog protein-coding common_peak2_52_64_-0.576597757758594_5.73406893414916_1.10994003514438 chr15 101372160 101372976 + 1.10994003514438 NA Intergenic Intergenic -2443 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_77_44_0.507465700779649_5.7455859467195_1.10994003514438 chr2 60125222 60125720 + 1.10994003514438 NA 5' UTR (NM_001001182, exon 1 of 36) 5' UTR (NM_001001182, exon 1 of 36) 269 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_52_64_-0.576597757758594_5.73406893414916_1.10994003514438-2 chr7 80947050 80947810 + 1.10994003514438 NA exon (NM_019951, exon 1 of 6) exon (NM_019951, exon 1 of 6) 120 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding common_peak1_77_44_0.507465700779649_5.7455859467195_1.10994003514438 chr6 128354709 128355840 + 1.10994003514438 NA intron (NM_011657, intron 1 of 10) intron (NM_011657, intron 1 of 10) 577 NM_011657 22158 Mm.291783 NM_011657 ENSMUSG00000001521 Tulp3 2310022L06Rik|AI316887 tubby-like protein 3 protein-coding common_peak2_53_64_-0.549820962128295_5.74745733196431_1.10994003514438-2 chr4 144929549 144930578 + 1.10994003514438 NA Intergenic Intergenic 36926 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_363_250_0.23448873135874_8.08878791963014_1.10878077333116 chr19 41981548 41982874 + 1.10878077333116 NA intron (NM_145500, intron 1 of 2) CpG 448 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak1_177_114_0.335762195882308_7.01337114888553_1.10867335202017 chr9 80066543 80067873 + 1.10867335202017 NA 5' UTR (NM_146003, exon 1 of 23) 5' UTR (NM_146003, exon 1 of 23) 305 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak2_177_114_0.335762195882308_7.01337114888553_1.10867335202017 chr12 72760505 72762120 + 1.10867335202017 NA 5' UTR (NM_008910, exon 1 of 6) 5' UTR (NM_008910, exon 1 of 6) 101 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding common_peak1_101_60_0.452874142427775_6.15717440877677_1.10782270834225 chr10 128626005 128626708 + 1.10782270834225 NA intron (NM_013765, intron 1 of 3) CpG 150 NM_013765 27370 Mm.32118 NM_013765 ENSMUSG00000025362 Rps26 - ribosomal protein S26 protein-coding common_peak1_100_60_0.438760561694527_6.15011761841015_1.10782270834225 chr11 49711850 49713067 + 1.10782270834225 NA 5' UTR (NM_212484, exon 1 of 12) 5' UTR (NM_212484, exon 1 of 12) 264 NM_212484 104625 Mm.247113 NM_212484 ENSMUSG00000020362 Cnot6 CCR4 CCR4-NOT transcription complex, subunit 6 protein-coding common_peak1_156_99_0.357561121249682_6.82263675039957_1.10772980863338 chr2 157449947 157451710 + 1.10772980863338 NA intron (NM_001025395, intron 2 of 13) intron (NM_001025395, intron 2 of 13) 26535 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak1_4_1_1.06380690211816_1.53190345105908_1.10720996964787-3 chr4 58910708 58910904 + 1.10720996964787 NA intron (NM_001355697, intron 1 of 49) MIRc|SINE|MIR 1124 NM_001355697 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|Ecpas|mKIAA0368 expressed sequence AI314180 protein-coding unique_peak1_4_1_1.06380690211816_1.53190345105908_1.10720996964787-2 chr2 152932298 152932500 + 1.10720996964787 NA exon (NM_010226, exon 1 of 1) exon (NM_010226, exon 1 of 1) 809 NM_010226 14239 Mm.205798 NM_010226 ENSMUSG00000074676 Foxs1 FREAC10|Fkh3|Fkhl18 forkhead box S1 protein-coding unique_peak2_0_4_-2.56366813237659_1.04009402869907_1.10720996964787-3 chr6 42418560 42418792 + 1.10720996964787 NA Intergenic Intergenic 13147 NM_199159 387512 Mm.377919 NM_199159 ENSMUSG00000056203 Tas2r135 Tas2r35|mt2r38 taste receptor, type 2, member 135 protein-coding unique_peak1_4_1_1.06380690211816_1.53190345105908_1.10720996964787 chr16 17645781 17645974 + 1.10720996964787 NA promoter-TSS (NM_001166164) promoter-TSS (NM_001166164) -593 NM_001166164 72315 Mm.297777 NM_001166164 ENSMUSG00000041617 Ccdc74a 2310015A05Rik coiled-coil domain containing 74A protein-coding unique_peak2_0_4_-2.56366813237659_1.04009402869907_1.10720996964787 chr19 17390197 17390399 + 1.10720996964787 NA Intergenic B1_Mur1|SINE|Alu -3745 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding unique_peak2_0_4_-2.56366813237659_1.04009402869907_1.10720996964787-2 chr3 66237291 66237582 + 1.10720996964787 NA intron (NM_145820, intron 4 of 13) B4A|SINE|B4 17549 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding common_peak1_136_85_0.379950819413682_6.61624016440894_1.10711981240961 chr15 76204415 76205737 + 1.10711981240961 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 1245 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_118_72_0.41461036845732_6.39712974310868_1.10704415004305-2 chr5 113992540 113994129 + 1.10704415004305 NA intron (NM_198109, intron 1 of 14) CpG 423 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot protein phosphatase 1 protein-coding common_peak1_118_72_0.41461036845732_6.39712974310868_1.10704415004305 chr15 53132592 53134140 + 1.10704415004305 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 212817 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_111_120_-0.401274102629158_6.71822618596001_1.10641620103878 chr1 151227789 151229796 + 1.10641620103878 NA Intergenic Intergenic 90758 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_42_53_-0.608644971954036_5.45056501618645_1.10619710598095 chr15 63484578 63485481 + 1.10619710598095 NA Intergenic Intergenic -5421 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA common_peak2_41_53_-0.642352806144088_5.43371109909142_1.10619710598095 chr15 12824240 12824679 + 1.10619710598095 NA promoter-TSS (NM_001130149) promoter-TSS (NM_001130149) 198 NM_029998 77877 Mm.207311 NM_029998 ENSMUSG00000022195 6030458C11Rik - RIKEN cDNA 6030458C11 gene protein-coding common_peak2_42_53_-0.608644971954036_5.45056501618645_1.10619710598095 chr11 94927084 94927728 + 1.10619710598095 NA Intergenic B1_Mur2|SINE|Alu -8818 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak2_42_53_-0.608644971954036_5.45056501618645_1.10619710598095-2 chr16 18248078 18248700 + 1.10619710598095 NA promoter-TSS (NM_001080999) promoter-TSS (NM_001080999) 305 NM_011239 19385 Mm.235287 NM_011239 ENSMUSG00000005732 Ranbp1 Htf9a RAN binding protein 1 protein-coding common_peak1_41_53_-0.642352806144088_5.43371109909142_1.10619710598095 chr11 70193841 70194092 + 1.10619710598095 NA Intergenic Intergenic -19944 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_63_35_0.546005083628995_5.44292754325681_1.10619710598094-2 chr16 45836385 45837199 + 1.10619710598094 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 7586 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_63_35_0.546005083628995_5.44292754325681_1.10619710598094 chr11 75454198 75455165 + 1.10619710598094 NA promoter-TSS (NM_138950) promoter-TSS (NM_138950) 36 NM_138950 192652 Mm.340378 NM_138950 ENSMUSG00000045374 Wdr81 BC054822|Gm883|mFLJ00182|nur5 WD repeat domain 81 protein-coding common_peak1_64_35_0.568215092193435_5.45403254753903_1.10619710598094-2 chr19 46484095 46485038 + 1.10619710598094 NA intron (NM_001025391, intron 11 of 11) intron (NM_001025391, intron 11 of 11) -17082 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_64_35_0.568215092193435_5.45403254753903_1.10619710598094 chr15 93335569 93336410 + 1.10619710598094 NA intron (NR_028315, intron 2 of 4) intron (NR_028315, intron 2 of 4) 946 NR_028315 67057 Mm.4714 NM_024189 ENSMUSG00000022634 Yaf2 2810021M11Rik YY1 associated factor 2 protein-coding common_peak2_63_35_0.546005083628995_5.44292754325681_1.10619710598094 chr3 122924451 122925088 + 1.10619710598094 NA promoter-TSS (NR_046036) promoter-TSS (NR_046036) 372 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik|Aln RIKEN cDNA 1810037I17 gene protein-coding common_peak1_64_35_0.568215092193435_5.45403254753903_1.10619710598094 chr15 73242724 73243199 + 1.10619710598094 NA intron (NM_001358046, intron 24 of 34) AT_rich|Low_complexity|Low_complexity 11921 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak2_64_35_0.568215092193435_5.45403254753903_1.10619710598094 chr1 183933293 183933849 + 1.10619710598094 NA Intergenic Intergenic 100427 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_63_35_0.546005083628995_5.44292754325681_1.10619710598094 chr1 64794979 64795738 + 1.10619710598094 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -57608 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_64_35_0.568215092193435_5.45403254753903_1.10619710598094-3 chr9 98433201 98433986 + 1.10619710598094 NA intron (NM_011254, intron 2 of 3) intron (NM_011254, intron 2 of 3) 10632 NM_011254 19659 Mm.279741 NM_011254 ENSMUSG00000046402 Rbp1 CRBPI|Crbp|Rbp-1 retinol binding protein 1, cellular protein-coding common_peak2_63_35_0.546005083628995_5.44292754325681_1.10619710598094-3 chr7 89837367 89837933 + 1.10619710598094 NA intron (NM_181407, intron 7 of 13) intron (NM_181407, intron 7 of 13) 65979 NM_001162979 70884 Mm.252823 NM_001162979 ENSMUSG00000039391 Ccdc81 4921513D09Rik coiled-coil domain containing 81 protein-coding common_peak2_64_35_0.568215092193435_5.45403254753903_1.10619710598094-2 chr17 56036059 56036565 + 1.10619710598094 NA intron (NM_001357649, intron 1 of 10) CpG 325 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak2_63_35_0.546005083628995_5.44292754325681_1.10619710598094-2 chr6 88964322 88965133 + 1.10619710598094 NA Intergenic B2_Mm1a|SINE|B2 62476 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_63_35_0.546005083628995_5.44292754325681_1.10619710598094-3 chr19 53451826 53452429 + 1.10619710598094 NA intron (NR_028427, intron 2 of 9) (TTCA)n|Simple_repeat|Simple_repeat 12669 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_109_66_0.425688131319922_6.27893325611773_1.10599757125155 chr6 88901876 88902973 + 1.10599757125155 NA 5' UTR (NM_011906, exon 1 of 12) 5' UTR (NM_011906, exon 1 of 12) 173 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-7 chr11 53756562 53756800 + 1.10484139239135 NA Intergenic Intergenic 6973 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-39 chrX 73342660 73342851 + 1.10484139239135 NA intron (NM_001160229, intron 1 of 4) CpG 134 NM_001160229 27081 Mm.26595 NM_031494 ENSMUSG00000031365 Zfp275 5430431L06Rik|AI593314|DXBay20|DXHXS52|DXPas8 zinc finger protein 275 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-14 chr14 54252511 54252700 + 1.10484139239135 NA intron (NM_010015, intron 1 of 1) intron (NM_010015, intron 1 of 1) 1324 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-10 chr11 115180406 115180648 + 1.10484139239135 NA 3' UTR (NM_012030, exon 6 of 6) 3' UTR (NM_012030, exon 6 of 6) 6789 NM_025400 66176 Mm.86823 NM_025400 ENSMUSG00000015542 Nat9 1110028N05Rik N-acetyltransferase 9 (GCN5-related, putative) protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-22 chr19 5747330 5747539 + 1.10484139239135 NA exon (NM_008520, exon 8 of 28) exon (NM_008520, exon 8 of 28) 6530 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-39 chr9 102755784 102755990 + 1.10484139239135 NA intron (NR_033301, intron 3 of 3) intron (NR_033301, intron 3 of 3) 16239 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135 chr1 134102642 134102842 + 1.10484139239135 NA Intergenic B1_Mur2|SINE|Alu -8500 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-28 chr3 28717493 28717768 + 1.10484139239135 NA intron (NM_031197, intron 5 of 10) intron (NM_031197, intron 5 of 10) 19727 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-10 chr12 110849887 110850091 + 1.10484139239135 NA promoter-TSS (NM_001199785) promoter-TSS (NM_001199785) -290 NM_001199785 72805 Mm.443524 NM_028365 ENSMUSG00000021271 Zfp839 2810455K09Rik zinc finger protein 839 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-25 chr4 126465585 126465772 + 1.10484139239135 NA intron (NM_153403, intron 1 of 18) intron (NM_153403, intron 1 of 18) 2905 NM_001317174 236511 Mm.30800 NM_153403 ENSMUSG00000041530 Ago1 Eif2c1 argonaute RISC catalytic subunit 1 protein-coding common_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-2 chr4 16168606 16168815 + 1.10484139239135 NA intron (NR_045765, intron 1 of 6) intron (NR_045765, intron 1 of 6) 4600 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-3 chr10 96805410 96805644 + 1.10484139239135 NA Intergenic Intergenic 188526 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-31 chr7 70355442 70355640 + 1.10484139239135 NA intron (NM_183261, intron 2 of 2) intron (NM_183261, intron 2 of 2) 5052 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-6 chr11 104335253 104335456 + 1.10484139239135 NA intron (NM_001359634, intron 14 of 14) intron (NM_001359634, intron 14 of 14) 103918 NM_001285454 17762 Mm.1287 NM_010838 ENSMUSG00000018411 Mapt AI413597|AW045860|Mtapt|Tau microtubule-associated protein tau protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-12 chr12 79944605 79944811 + 1.10484139239135 NA Intergenic Intergenic -8444 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-9 chr12 86786748 86786938 + 1.10484139239135 NA Intergenic Intergenic 52474 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding unique_peak2_9_5_0.471789421823762_2.82085721163304_1.10484139239135 chr14 76927064 76927267 + 1.10484139239135 NA Intergenic Intergenic 109452 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-4 chr11 5886257 5886457 + 1.10484139239135 NA Intergenic Intergenic -8101 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-27 chr5 66587817 66588072 + 1.10484139239135 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 30873 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-6 chr10 77126348 77126618 + 1.10484139239135 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -12778 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-12 chr13 70727870 70728163 + 1.10484139239135 NA non-coding (NR_137640, exon 23 of 23) non-coding (NR_137640, exon 23 of 23) -90382 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-29 chr5 145206191 145206454 + 1.10484139239135 NA intron (NM_001359191, intron 1 of 5) intron (NM_001359191, intron 1 of 5) 1763 NM_001359188 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-19 chr17 47630602 47630807 + 1.10484139239135 NA promoter-TSS (NM_198421) promoter-TSS (NM_198421) 14 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-34 chr7 67618969 67619183 + 1.10484139239135 NA exon (NM_175124, exon 4 of 10) exon (NM_175124, exon 4 of 10) 26160 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak1_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-3 chr5 149611905 149612109 + 1.10484139239135 NA TTS (NM_029440) TTS (NM_029440) 24308 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-27 chr2 173238307 173238550 + 1.10484139239135 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) -19506 NM_001139519 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding unique_peak1_5_8_-0.844939395850573_2.74745530351703_1.10484139239135 chr13 32960920 32961112 + 1.10484139239135 NA Intergenic Intergenic -4497 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-3 chr1 158765672 158765897 + 1.10484139239135 NA intron (NM_001085376, intron 16 of 21) intron (NM_001085376, intron 16 of 21) 191654 NM_001085376 23850 Mm.458621 NM_001085376 ENSMUSG00000073530 Pappa2 PAPP-A2|PLAC3|Pappe pappalysin 2 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-37 chr9 71363340 71363606 + 1.10484139239135 NA Intergenic Intergenic 121485 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-22 chr3 146473303 146473515 + 1.10484139239135 NA intron (NM_001316756, intron 10 of 14) intron (NM_001316756, intron 10 of 14) 22942 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-25 chr2 118287378 118287581 + 1.10484139239135 NA intron (NM_201367, intron 1 of 2) intron (NM_201367, intron 1 of 2) -17435 NR_045919 73358 Mm.437192 NR_045919 ENSMUSG00000085889 1700054M17Rik - RIKEN cDNA 1700054M17 gene ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-20 chr17 84271197 84271471 + 1.10484139239135 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -83387 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-30 chr6 50409568 50409817 + 1.10484139239135 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -26855 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-37 chr9 57601582 57601887 + 1.10484139239135 NA 3' UTR (NM_146223, exon 3 of 3) 3' UTR (NM_146223, exon 3 of 3) 4547 NM_146223 235415 Mm.35242 NM_146223 ENSMUSG00000039714 Cplx3 BC016632|CpxIII|ERGIC-53L|ERGL|Lamn1l|Lman1l complexin 3 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-34 chr8 82943197 82943396 + 1.10484139239135 NA intron (NM_177378, intron 1 of 6) intron (NM_177378, intron 1 of 6) 79940 NM_177378 330812 Mm.491438 NM_177378 ENSMUSG00000047747 Rnf150 A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214 ring finger protein 150 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-15 chr15 85348782 85348999 + 1.10484139239135 NA intron (NM_016843, intron 1 of 11) intron (NM_016843, intron 1 of 11) 12509 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-33 chr5 30340837 30341061 + 1.10484139239135 NA promoter-TSS (NM_001033460) promoter-TSS (NM_001033460) -714 NM_001033460 381738 Mm.389604 NM_001033460 ENSMUSG00000073102 Drc1 Ccdc164|Gm1060|b2b1654Clo dynein regulatory complex subunit 1 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135 chr1 39909594 39909809 + 1.10484139239135 NA intron (NM_001252202, intron 2 of 29) intron (NM_001252202, intron 2 of 29) 8788 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak1_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-2 chr5 92766877 92767140 + 1.10484139239135 NA intron (NM_015756, intron 1 of 10) RLTR15|LTR|ERVK 21554 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-8 chr11 69334583 69334866 + 1.10484139239135 NA Intergenic MARNA|DNA|TcMar-Mariner -6045 NR_027827 80515 Mm.5324 NM_020591 ENSMUSG00000043419 Chd3os 2310043C11Rik|A030009H04Rik|AA589459|AB041807|MNCb-2875|RNF21 chromodomain helicase DNA binding protein 3, opposite strand ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-11 chr12 17416980 17417183 + 1.10484139239135 NA intron (NM_001008421, intron 19 of 20) intron (NM_001008421, intron 19 of 20) 61689 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-18 chr19 24291798 24291994 + 1.10484139239135 NA Intergenic B1_Mur2|SINE|Alu -11310 NM_008044 14297 Mm.7319 NM_008044 ENSMUSG00000059363 Fxn FA|FARR|Frda|X25 frataxin protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-36 chr8 106717574 106717803 + 1.10484139239135 NA intron (NM_173037, intron 8 of 17) intron (NM_173037, intron 8 of 17) 34620 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-31 chr4 130694263 130694638 + 1.10484139239135 NA intron (NM_001356566, intron 2 of 17) intron (NM_001356566, intron 2 of 17) 31093 NM_001356564 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-14 chr13 48625766 48625989 + 1.10484139239135 NA promoter-TSS (NM_001301781) promoter-TSS (NM_001301781) -205 NM_001301781 218232 Mm.315089 NM_207232 ENSMUSG00000038042 Ptpdc1 AI843923|AW456874|Naa-1|Ptpcd1 protein tyrosine phosphatase domain containing 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-35 chr8 110323128 110323324 + 1.10484139239135 NA intron (NM_172916, intron 6 of 86) intron (NM_172916, intron 6 of 86) 56249 NM_172916 244653 Mm.444803 NM_172916 ENSMUSG00000059854 Hydin 1700034M11Rik|4930545D19Rik|4932703P14|672398|A830061H17|AC069308.21gm4|Gm9558|hy-3|hy3|hyrh HYDIN, axonemal central pair apparatus protein protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-17 chr17 27150593 27150807 + 1.10484139239135 NA intron (NM_173027, intron 3 of 5) intron (NM_173027, intron 3 of 5) -16809 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-23 chr2 30752951 30753219 + 1.10484139239135 NA Intergenic Intergenic 31875 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-17 chr18 82916754 82916958 + 1.10484139239135 NA intron (NM_001177464, intron 1 of 5) intron (NM_001177464, intron 1 of 5) 2224 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-24 chr4 57797571 57797845 + 1.10484139239135 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -47540 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-20 chr3 88098867 88099077 + 1.10484139239135 NA exon (NM_001033484, exon 15 of 38) exon (NM_001033484, exon 15 of 38) 16921 NM_001033484 404710 Mm.331133 NM_001033484 ENSMUSG00000028068 Iqgap3 AI593484|D030034H08 IQ motif containing GTPase activating protein 3 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-2 chr10 58497501 58497760 + 1.10484139239135 NA promoter-TSS (NM_001162956) promoter-TSS (NM_001162956) -307 NM_001162956 76138 Mm.211744 NM_001162956 ENSMUSG00000038010 Ccdc138 6230424H07Rik|BC042726 coiled-coil domain containing 138 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-7 chr12 9743973 9744163 + 1.10484139239135 NA Intergenic Intergenic 169626 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135 chr1 171470371 171470591 + 1.10484139239135 NA Intergenic Intergenic 32920 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-29 chr3 51654034 51654276 + 1.10484139239135 NA Intergenic Intergenic -7024 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-21 chr3 143659951 143660181 + 1.10484139239135 NA Intergenic Intergenic 52077 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-13 chr13 47220597 47220839 + 1.10484139239135 NA intron (NM_146042, intron 3 of 7) intron (NM_146042, intron 3 of 7) 26715 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-32 chr7 130200792 130200999 + 1.10484139239135 NA intron (NM_201601, intron 5 of 15) intron (NM_201601, intron 5 of 15) 65913 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-30 chr4 58182341 58182578 + 1.10484139239135 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 24137 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-13 chr14 25374828 25375041 + 1.10484139239135 NA Intergenic Intergenic -84251 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-26 chr5 51190295 51190483 + 1.10484139239135 NA Intergenic Intergenic 363532 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-4 chr1 172377476 172377710 + 1.10484139239135 NA exon (NM_026234, exon 1 of 1) exon (NM_026234, exon 1 of 1) 1062 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-38 chr9 77377344 77377581 + 1.10484139239135 NA intron (NR_040378, intron 3 of 3) intron (NR_040378, intron 3 of 3) 21954 NR_040378 70487 Mm.58958 NR_040378 ENSMUSG00000099170 5730403I07Rik - RIKEN cDNA 5730403I07 gene ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-16 chr16 45386727 45386960 + 1.10484139239135 NA intron (NM_001358443, intron 4 of 4) intron (NM_001358443, intron 4 of 4) 22210 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-28 chr5 145203880 145204067 + 1.10484139239135 NA promoter-TSS (NM_001167944) promoter-TSS (NM_001167944) -586 NM_001359187 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-16 chr16 55528761 55528987 + 1.10484139239135 NA Intergenic Intergenic 34143 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-26 chr2 167951845 167952050 + 1.10484139239135 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 19620 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-35 chr8 105268977 105269179 + 1.10484139239135 NA promoter-TSS (NM_001256044) promoter-TSS (NM_001256044) -723 NM_011939 26386 Mm.89204 NM_011939 ENSMUSG00000033249 Hsf4 HSF 4|HSTF 4|HSTF4|ldis1|mHSF4 heat shock transcription factor 4 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-33 chr8 25537996 25538208 + 1.10484139239135 NA intron (NM_001079909, intron 2 of 16) URR1A|DNA|hAT-Charlie 17981 NR_110510 102633315 Mm.437828 NR_110510 ENSMUSG00000086134 Gm16159 - predicted gene 16159 ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-38 chr9 96769994 96770215 + 1.10484139239135 NA intron (NR_102295, intron 2 of 2) intron (NR_102295, intron 2 of 2) 4542 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-21 chr18 60484096 60484325 + 1.10484139239135 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 17773 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-18 chr17 36858560 36858799 + 1.10484139239135 NA 3' UTR (NM_001286727, exon 10 of 10) 3' UTR (NM_001286727, exon 10 of 10) 8508 NM_001024134 69097 Mm.307027 NM_001024134 ENSMUSG00000050747 Trim15 1810012B10Rik tripartite motif-containing 15 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-11 chr13 3766633 3766842 + 1.10484139239135 NA Intergenic Intergenic 37581 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-2 chr1 89820681 89820897 + 1.10484139239135 NA intron (NM_001037136, intron 12 of 16) intron (NM_001037136, intron 12 of 16) 110387 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-9 chr11 99577234 99577442 + 1.10484139239135 NA Intergenic Intergenic 3678 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-19 chr2 28538984 28539174 + 1.10484139239135 NA intron (NM_001145836, intron 1 of 17) intron (NM_001145836, intron 1 of 17) 5615 NM_001145836 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-8 chr12 13217459 13217676 + 1.10484139239135 NA Intergenic Intergenic 31607 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-5 chr11 76073617 76073856 + 1.10484139239135 NA intron (NM_026664, intron 17 of 21) intron (NM_026664, intron 17 of 21) -45954 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-5 chr10 12858983 12859239 + 1.10484139239135 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 2624 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-15 chr15 58260911 58261114 + 1.10484139239135 NA Intergenic Intergenic -46120 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-32 chr4 152007262 152007476 + 1.10484139239135 NA Intergenic Intergenic -1522 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding unique_peak2_5_8_-0.844939395850573_2.74745530351703_1.10484139239135-24 chr2 35268077 35268279 + 1.10484139239135 NA intron (NM_001206367, intron 2 of 17) intron (NM_001206367, intron 2 of 17) 1434 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-36 chr9 64178932 64179125 + 1.10484139239135 NA promoter-TSS (NM_183316) promoter-TSS (NM_183316) -269 NM_183316 330959 Mm.24082 NM_183316 ENSMUSG00000032398 Snapc5 2010103A03Rik small nuclear RNA activating complex, polypeptide 5 protein-coding unique_peak1_9_5_0.471789421823762_2.82085721163304_1.10484139239135-23 chr4 54863896 54864083 + 1.10484139239135 NA Intergenic Intergenic -83956 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_160_164_-0.328864842448676_7.20188979302148_1.10431481370788 chr15 96459363 96460887 + 1.10431481370788 NA intron (NM_028148, intron 1 of 14) CpG 718 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_130_137_-0.366462148335779_6.92529338261028_1.10401322377049 chr11 50210360 50211477 + 1.10401322377049 NA promoter-TSS (NM_011018) promoter-TSS (NM_011018) -98 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak2_32_43_-0.692365634239539_5.11324880151753_1.10223211335955-3 chr9 86695917 86696346 + 1.10223211335955 NA promoter-TSS (NM_008615) promoter-TSS (NM_008615) -217 NM_008615 17436 Mm.148155 NM_008615 ENSMUSG00000032418 Me1 D9Ertd267e|Mdh-1|Mod-1|Mod1 malic enzyme 1, NADP(+)-dependent, cytosolic protein-coding unique_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-2 chr11 82845140 82845835 + 1.10223211335955 NA intron (NM_001164570, intron 1 of 7) intron (NM_001164570, intron 1 of 7) -16444 NM_026097 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955 chr13 32926195 32926703 + 1.10223211335955 NA Intergenic Intergenic -28309 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak2_32_43_-0.692365634239539_5.11324880151753_1.10223211335955-2 chr9 21592063 21592715 + 1.10223211335955 NA promoter-TSS (NM_178619) promoter-TSS (NM_178619) -333 NM_178619 69773 Mm.39704 NM_178619 ENSMUSG00000048429 Timm29 1810026J23Rik|TIM29 translocase of inner mitochondrial membrane 29 protein-coding common_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-2 chr15 25876203 25876766 + 1.10223211335955 NA intron (NM_001034851, intron 1 of 8) B3|SINE|B2 33186 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955 chr10 60003325 60004137 + 1.10223211335955 NA promoter-TSS (NM_001347451) promoter-TSS (NM_001347451) 404 NM_001199187 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding common_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-4 chr6 142756789 142757225 + 1.10223211335955 NA exon (NM_009908, exon 1 of 8) exon (NM_009908, exon 1 of 8) 321 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding unique_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-3 chr13 67525506 67526075 + 1.10223211335955 NA intron (NM_133228, intron 1 of 3) intron (NM_133228, intron 1 of 3) 441 NM_133228 170763 Mm.491205 NM_133228 ENSMUSG00000097333 Zfp87 2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72 zinc finger protein 87 protein-coding common_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-3 chr5 111227671 111228225 + 1.10223211335955 NA intron (NM_001267622, intron 8 of 22) intron (NM_001267622, intron 8 of 22) -102749 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-5 chr9 71364348 71365154 + 1.10223211335955 NA Intergenic Intergenic 120207 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak1_51_27_0.611128272824265_5.11291905846974_1.10223211335955-4 chr13 102896331 102897100 + 1.10223211335955 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 136460 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_32_43_-0.692365634239539_5.11324880151753_1.10223211335955 chr6 108451056 108451626 + 1.10223211335955 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -38402 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_58_31_0.59940108532268_5.29970054266134_1.10165134406427 chr13 103978065 103978636 + 1.10165134406427 NA Intergenic Intergenic -57764 NM_001005868 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak1_58_31_0.59940108532268_5.29970054266134_1.10165134406427-2 chr5 53509253 53510176 + 1.10165134406427 NA Intergenic Intergenic -46065 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak1_37_48_-0.645546389570061_5.29193664933018_1.10165134406427 chr13 24280260 24280915 + 1.10165134406427 NA exon (NM_001311122, exon 1 of 38) exon (NM_001311122, exon 1 of 38) 203 NM_001311122 68732 Mm.211047 NM_026825 ENSMUSG00000021338 Carmil1 1110037D04Rik|AI425970|CARMIL|CARML1|D130057M20|Lrrc16|Lrrc16a capping protein regulator and myosin 1 linker 1 protein-coding common_peak2_37_48_-0.645546389570061_5.29193664933018_1.10165134406427-4 chr3 129533530 129534071 + 1.10165134406427 NA intron (NM_130450, intron 2 of 4) CpG -1412 NR_153368 102639747 Mm.393257 NR_153368 Gm35986 - predicted gene, 35986 ncRNA common_peak2_36_48_-0.683749103057766_5.27283529258633_1.10165134406427 chr1 158733264 158734213 + 1.10165134406427 NA intron (NM_001085376, intron 20 of 21) intron (NM_001085376, intron 20 of 21) 223700 NM_001085376 23850 Mm.458621 NM_001085376 ENSMUSG00000073530 Pappa2 PAPP-A2|PLAC3|Pappe pappalysin 2 protein-coding common_peak1_37_48_-0.645546389570061_5.29193664933018_1.10165134406427-2 chr12 112576756 112577224 + 1.10165134406427 NA Intergenic Intergenic -11794 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_58_31_0.59940108532268_5.29970054266134_1.10165134406427-2 chr5 110269397 110269784 + 1.10165134406427 NA intron (NM_028273, intron 1 of 5) CpG 309 NM_028273 72542 Mm.61682 NM_028273 ENSMUSG00000029500 Pgam5 2610528A17Rik phosphoglycerate mutase family member 5 protein-coding common_peak2_36_48_-0.683749103057766_5.27283529258633_1.10165134406427-3 chr16 29945558 29946478 + 1.10165134406427 NA Intergenic CpG 33106 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak2_58_31_0.59940108532268_5.29970054266134_1.10165134406427 chr15 102399383 102399947 + 1.10165134406427 NA Intergenic Intergenic -6651 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_58_31_0.59940108532268_5.29970054266134_1.10165134406427-3 chr9 123851497 123852355 + 1.10165134406427 NA promoter-TSS (NM_148925) promoter-TSS (NM_148925) -27 NM_001110253 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak1_36_48_-0.683749103057766_5.27283529258633_1.10165134406427-2 chr6 30693260 30693724 + 1.10165134406427 NA intron (NR_130775, intron 1 of 2) CpG 257 NM_031998 83922 Mm.65389 NM_031998 ENSMUSG00000029790 Cep41 1700017E11Rik|2810431D15Rik|Tsga14 centrosomal protein 41 protein-coding common_peak2_37_48_-0.645546389570061_5.29193664933018_1.10165134406427 chr11 29840113 29840770 + 1.10165134406427 NA intron (NM_146016, intron 10 of 41) intron (NM_146016, intron 10 of 41) -14773 NM_176829 216622 Mm.443260 NM_176829 ENSMUSG00000078157 4931440F15Rik Fem1ab RIKEN cDNA 4931440F15 gene protein-coding common_peak1_36_48_-0.683749103057766_5.27283529258633_1.10165134406427 chr12 51694391 51695241 + 1.10165134406427 NA intron (NM_001329698, intron 1 of 5) intron (NM_001329698, intron 1 of 5) -2902 NM_052973 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding common_peak2_36_48_-0.683749103057766_5.27283529258633_1.10165134406427-2 chr11 116333989 116334613 + 1.10165134406427 NA exon (NM_008240, exon 2 of 3) exon (NM_008240, exon 2 of 3) 1053 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak1_37_48_-0.645546389570061_5.29193664933018_1.10165134406427 chr10 68278715 68279195 + 1.10165134406427 NA promoter-TSS (NM_023598) promoter-TSS (NM_023598) -229 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_37_48_-0.645546389570061_5.29193664933018_1.10165134406427-3 chr3 90600591 90601405 + 1.10165134406427 NA intron (NM_011310, intron 1 of 2) intron (NM_011310, intron 1 of 2) 784 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak1_37_48_-0.645546389570061_5.29193664933018_1.10165134406427-3 chr17 70720517 70720885 + 1.10165134406427 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 126076 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_57_31_0.574913021377267_5.28745651068863_1.10165134406427 chr15 66806694 66807214 + 1.10165134406427 NA intron (NM_001029841, intron 1 of 7) RMER30|DNA|hAT-Charlie 24875 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_37_48_-0.645546389570061_5.29193664933018_1.10165134406427-2 chr15 102350259 102350677 + 1.10165134406427 NA promoter-TSS (NR_155425) promoter-TSS (NR_155425) 291 NM_153416 223921 Mm.352946 NM_153416 ENSMUSG00000036678 Aaas AAA|ADRACALA|D030041N15Rik|GL003 achalasia, adrenocortical insufficiency, alacrimia protein-coding common_peak2_96_105_-0.416309900152121_6.51976550448714_1.10148637837015-2 chr4 137473422 137474536 + 1.10148637837015 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 5176 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_127_79_0.386947010610701_6.51540160019271_1.10148637837015 chr11 94990653 94992236 + 1.10148637837015 NA 5' UTR (NM_172261, exon 1 of 10) 5' UTR (NM_172261, exon 1 of 10) 232 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_96_105_-0.416309900152121_6.51976550448714_1.10148637837015 chr11 98775626 98776999 + 1.10148637837015 NA promoter-TSS (NM_145434) promoter-TSS (NM_145434) -935 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak2_96_105_-0.416309900152121_6.51976550448714_1.10148637837015-3 chr7 4792357 4793716 + 1.10148637837015 NA promoter-TSS (NM_009081) promoter-TSS (NM_009081) 71 NM_009081 19943 Mm.379002 NM_009081 ENSMUSG00000030432 Rpl28 D7Wsu21e ribosomal protein L28 protein-coding common_peak2_66_77_-0.503849201221861_6.03347761825132_1.10096426460187-2 chr6 86370617 86371879 + 1.10096426460187 NA promoter-TSS (NM_026506) promoter-TSS (NM_026506) -292 NM_026506 68011 Mm.276802 NM_026506 ENSMUSG00000057278 Snrpg 2810024K17Rik|AL022803|SMG|sm-G|snRNP-G small nuclear ribonucleoprotein polypeptide G protein-coding common_peak1_93_55_0.459251401671207_6.03698062289321_1.10096426460187-2 chr19 9977829 9978517 + 1.10096426460187 NA Intergenic Intergenic -2427 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_93_55_0.459251401671207_6.03698062289321_1.10096426460187 chr10 80100359 80100995 + 1.10096426460187 NA intron (NM_001359637, intron 1 of 3) intron (NM_001359637, intron 1 of 3) 510 NM_001359635 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_66_77_-0.503849201221861_6.03347761825132_1.10096426460187-4 chr9 110682711 110683837 + 1.10096426460187 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 26771 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_66_77_-0.503849201221861_6.03347761825132_1.10096426460187 chr11 16808907 16809969 + 1.10096426460187 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 57235 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_93_55_0.459251401671207_6.03698062289321_1.10096426460187-3 chr3 69316198 69316684 + 1.10096426460187 NA promoter-TSS (NM_178726) promoter-TSS (NM_178726) -477 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak2_66_77_-0.503849201221861_6.03347761825132_1.10096426460187-3 chr8 111056251 111057127 + 1.10096426460187 NA exon (NM_028274, exon 1 of 1) exon (NM_028274, exon 1 of 1) 350 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak2_93_55_0.459251401671207_6.03698062289321_1.10096426460187 chr1 45626279 45626820 + 1.10096426460187 NA Intergenic Intergenic -123267 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_121_129_-0.382266723298822_6.83123445137904_1.10064617548447-2 chr16 87494623 87495831 + 1.10064617548447 NA promoter-TSS (NR_040375) promoter-TSS (NR_040375) 642 NM_009840 12469 Mm.328673 NM_009840 ENSMUSG00000025613 Cct8 AI132397|Cctq|Tcpq chaperonin containing Tcp1, subunit 8 (theta) protein-coding common_peak2_121_129_-0.382266723298822_6.83123445137904_1.10064617548447 chr1 86526798 86527997 + 1.10064617548447 NA intron (NM_008972, intron 1 of 4) CpG-365 840 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_320_219_0.244586946158709_7.90365318660401_1.10006753937037 chr11 78362607 78365609 + 1.10006753937037 NA intron (NM_008238, intron 6 of 8) MIR3|SINE|MIR 17398 NM_001313987 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding common_peak1_23_34_-0.818407370499717_4.72007933169511_1.09826982379496 chr3 142439280 142439643 + 1.09826982379496 NA Intergenic Intergenic -43765 NM_019808 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_40_20_0.685697124394921_4.73516598497622_1.09826982379496-3 chr4 11672942 11673641 + 1.09826982379496 NA Intergenic Intergenic -31156 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding unique_peak2_23_34_-0.818407370499717_4.72007933169511_1.09826982379496-2 chr17 53584167 53584620 + 1.09826982379496 NA intron (NM_001190846, intron 1 of 17) intron (NM_001190846, intron 1 of 17) 267 NM_001190846 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_23_34_-0.818407370499717_4.72007933169511_1.09826982379496 chr12 99563219 99563702 + 1.09826982379496 NA promoter-TSS (NR_136760) promoter-TSS (NR_136760) -381 NR_136760 102639404 Mm.396324 NR_136760 ENSMUSG00000097917 Gm26839 - predicted gene, 26839 ncRNA common_peak1_40_20_0.685697124394921_4.73516598497622_1.09826982379496-2 chr14 70765951 70766441 + 1.09826982379496 NA intron (NM_023045, intron 1 of 27) CpG 432 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|exp7 exportin 7 protein-coding common_peak2_23_34_-0.818407370499717_4.72007933169511_1.09826982379496-3 chr18 39491749 39492013 + 1.09826982379496 NA Intergenic Intergenic -4636 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_23_34_-0.818407370499717_4.72007933169511_1.09826982379496 chr13 104517304 104517751 + 1.09826982379496 NA Intergenic Intergenic 229692 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_40_20_0.685697124394921_4.73516598497622_1.09826982379496 chr11 6527292 6527764 + 1.09826982379496 NA intron (NR_045893, intron 2 of 3) B1_Mus2|SINE|Alu 1232 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974 small nucleolar RNA host gene 15 ncRNA unique_peak1_40_20_0.685697124394921_4.73516598497622_1.09826982379496 chr15 25322953 25323555 + 1.09826982379496 NA Intergenic Intergenic 90510 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak1_40_20_0.685697124394921_4.73516598497622_1.09826982379496-2 chr2 30967303 30967859 + 1.09826982379496 NA intron (NM_144884, intron 1 of 4) CpG 337 NM_144884 30931 Mm.154994 NM_144884 ENSMUSG00000026849 Tor1a DQ2|Dyt1|torsinA torsin family 1, member A (torsin A) protein-coding unique_peak2_23_34_-0.818407370499717_4.72007933169511_1.09826982379496-3 chr6 113065325 113065704 + 1.09826982379496 NA intron (NM_008188, intron 6 of 9) intron (NM_008188, intron 6 of 9) 11730 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak2_40_20_0.685697124394921_4.73516598497622_1.09826982379496-3 chr7 47008642 47009071 + 1.09826982379496 NA promoter-TSS (NM_175318) promoter-TSS (NM_175318) -442 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak2_40_20_0.685697124394921_4.73516598497622_1.09826982379496 chr1 34005864 34006331 + 1.09826982379496 NA intron (NM_001276764, intron 3 of 102) CpG -5728 NM_133833 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak2_23_34_-0.818407370499717_4.72007933169511_1.09826982379496-2 chr13 80886306 80886621 + 1.09826982379496 NA intron (NR_153411, intron 1 of 7) intron (NR_153411, intron 1 of 7) 368 NR_153411 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak2_40_20_0.685697124394921_4.73516598497622_1.09826982379496-2 chr15 77785456 77785769 + 1.09826982379496 NA intron (NM_022410, intron 13 of 40) intron (NM_022410, intron 13 of 40) -28602 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak1_71_40_0.527104264481377_5.62110413685877_1.09778364124568-4 chr7 45830054 45831089 + 1.09778364124568 NA intron (NM_153419, intron 1 of 6) intron (NM_153419, intron 1 of 6) 218 NR_152183 101612 Mm.274847 NM_153419 ENSMUSG00000053801 Grwd1 A301|AI504353|Grwd|Wdr28 glutamate-rich WD repeat containing 1 protein-coding common_peak2_48_59_-0.573532452242464_5.62012436948729_1.09778364124568-4 chr17 36837180 36837779 + 1.09778364124568 NA 5' UTR (NM_001286726, exon 2 of 10) 5' UTR (NM_001286726, exon 2 of 10) 333 NM_001286726 22670 Mm.34587 NM_030698 ENSMUSG00000024457 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif-containing 26 protein-coding common_peak1_71_40_0.527104264481377_5.62110413685877_1.09778364124568-5 chr8 88118821 88119324 + 1.09778364124568 NA promoter-TSS (NR_151771) promoter-TSS (NR_151771) 313 NM_029074 382030 Mm.216574 NM_029074 ENSMUSG00000036810 Cnep1r1 5033428A16Rik|NEP1-R1|Tmem188 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding common_peak1_48_59_-0.573532452242464_5.62012436948729_1.09778364124568 chr15 102063421 102064409 + 1.09778364124568 NA Intergenic Intergenic -9858 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak1_47_59_-0.603069928736513_5.60535563124026_1.09778364124568 chr11 40692335 40693180 + 1.09778364124568 NA promoter-TSS (NM_134017) promoter-TSS (NM_134017) -75 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_71_40_0.527104264481377_5.62110413685877_1.09778364124568 chr14 21499442 21500398 + 1.09778364124568 NA 5' UTR (NM_017479, exon 1 of 17) 5' UTR (NM_017479, exon 1 of 17) 135 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak2_71_40_0.527104264481377_5.62110413685877_1.09778364124568 chr14 64440745 64441447 + 1.09778364124568 NA promoter-TSS (NM_001253714) promoter-TSS (NM_001253714) -56 NM_001253712 110265 Mm.26713 NM_026322 ENSMUSG00000054733 Msra 2310045J23Rik|6530413P12Rik|MSR-A methionine sulfoxide reductase A protein-coding common_peak2_48_59_-0.573532452242464_5.62012436948729_1.09778364124568-3 chr14 7868116 7868791 + 1.09778364124568 NA intron (NM_001081427, intron 2 of 45) intron (NM_001081427, intron 2 of 45) 50496 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_71_40_0.527104264481377_5.62110413685877_1.09778364124568-3 chr19 41674695 41675571 + 1.09778364124568 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 68723 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak1_47_59_-0.603069928736513_5.60535563124026_1.09778364124568-2 chr8 80739763 80740181 + 1.09778364124568 NA promoter-TSS (NM_053124) promoter-TSS (NM_053124) -513 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak1_71_40_0.527104264481377_5.62110413685877_1.09778364124568-2 chr14 64948905 64949842 + 1.09778364124568 NA promoter-TSS (NM_001253731) promoter-TSS (NM_001253731) 484 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding common_peak2_48_59_-0.573532452242464_5.62012436948729_1.09778364124568-2 chr13 110923051 110923881 + 1.09778364124568 NA Intergenic Intergenic -19620 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_48_59_-0.573532452242464_5.62012436948729_1.09778364124568 chr10 24590463 24591108 + 1.09778364124568 NA Intergenic Intergenic -4657 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_47_59_-0.603069928736513_5.60535563124026_1.09778364124568 chr9 103008393 103008911 + 1.09778364124568 NA exon (NM_033314, exon 1 of 14) exon (NM_033314, exon 1 of 14) 163 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_119_73_0.406969220423691_6.4129379758408_1.09754858380422 chr10 63022832 63023827 + 1.09754858380422 NA intron (NM_001079824, intron 1 of 9) CpG 520 NM_001079824 432467 Mm.274784 NM_001079824 ENSMUSG00000020069 Hnrnph3 AA693301|AI666703|Hnrph3 heterogeneous nuclear ribonucleoprotein H3 protein-coding common_peak1_119_73_0.406969220423691_6.4129379758408_1.09754858380422-2 chr16 16302418 16303610 + 1.09754858380422 NA promoter-TSS (NR_038046) promoter-TSS (NR_038046) 49 NM_198246 70120 Mm.37486 NM_198246 ENSMUSG00000022792 Yars2 2210023C10Rik|tyrRS tyrosyl-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_119_73_0.406969220423691_6.4129379758408_1.09754858380422 chr9 58554449 58555394 + 1.09754858380422 NA Intergenic CpG -13981 NM_133983 102657 Mm.5356 NM_133983 ENSMUSG00000035914 Cd276 6030411F23Rik|AU016588|B7RP-2|B7h3 CD276 antigen protein-coding common_peak1_131_138_-0.365985047472238_6.93594854898739_1.09745209753342 chr11 88527498 88528512 + 1.09745209753342 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -91246 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_168_108_0.338742020769017_6.93755533516143_1.0974520975334 chr18 67390796 67392188 + 1.0974520975334 NA intron (NM_026473, intron 2 of 3) CpG-7052 761 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding common_peak2_168_108_0.338742020769017_6.93755533516143_1.0974520975334 chr19 5740460 5741829 + 1.0974520975334 NA intron (NM_008520, intron 1 of 27) intron (NM_008520, intron 1 of 27) 240 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak1_214_141_0.30204235031214_7.30076829466075_1.09694392257656 chr19 40269664 40271500 + 1.09694392257656 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 1034 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_151_156_-0.339567253492969_7.12483712214514_1.09690630917054 chr5 103758969 103761702 + 1.09690630917054 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 5762 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_73_84_-0.485485174653504_6.16664834881095_1.09659900772475 chr7 29179519 29180400 + 1.09659900772475 NA intron (NM_026545, intron 1 of 6) intron (NM_026545, intron 1 of 6) 714 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding common_peak2_73_84_-0.485485174653504_6.16664834881095_1.09659900772475 chr12 112999786 113000687 + 1.09659900772475 NA exon (NM_028193, exon 1 of 18) exon (NM_028193, exon 1 of 18) 385 NM_028193 72308 Mm.196721 NM_028193 ENSMUSG00000011158 Brf1 2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein-coding common_peak1_86_50_0.483323281633226_5.91408698278811_1.09647263857051-2 chr7 114253874 114254695 + 1.09647263857051 NA intron (NM_033370, intron 1 of 21) CpG 396 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak2_86_50_0.483323281633226_5.91408698278811_1.09647263857051-2 chr19 3324847 3325491 + 1.09647263857051 NA intron (NM_013495, intron 1 of 18) CpG 1868 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_86_50_0.483323281633226_5.91408698278811_1.09647263857051 chr3 27938475 27939184 + 1.09647263857051 NA intron (NM_001164056, intron 1 of 26) CpG 149 NM_001164056 18805 Mm.212039 NM_008875 ENSMUSG00000027695 Pld1 AA536939|C85393|Pld1a|Pld1b|mPLD1 phospholipase D1 protein-coding common_peak2_86_50_0.483323281633226_5.91408698278811_1.09647263857051 chr11 74559399 74560268 + 1.09647263857051 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 30325 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_60_71_-0.522768932139436_5.90854053537259_1.0964726385705 chr5 24908287 24909251 + 1.0964726385705 NA promoter-TSS (NM_001170556) promoter-TSS (NM_001170556) -260 NM_001170555 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding common_peak1_60_71_-0.522768932139436_5.90854053537259_1.0964726385705 chr17 55878697 55879406 + 1.0964726385705 NA promoter-TSS (NM_144546) promoter-TSS (NM_144546) -98 NM_144546 104349 Mm.460659 NM_144546 ENSMUSG00000057835 Zfp119a AL024077|Mzf13|Zfp119 zinc finger protein 119a protein-coding common_peak1_81_91_-0.452602388456575_6.29726076182873_1.09572805394914-3 chr5 104398379 104399328 + 1.09572805394914 NA Intergenic Intergenic -36258 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_81_91_-0.452602388456575_6.29726076182873_1.09572805394914-2 chr4 126201481 126202665 + 1.09572805394914 NA intron (NM_001356455, intron 1 of 11) intron (NM_001356455, intron 1 of 11) 637 NM_001356455 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak1_81_91_-0.452602388456575_6.29726076182873_1.09572805394914 chr1 46852781 46853427 + 1.09572805394914 NA intron (NM_001356416, intron 1 of 10) CpG 514 NM_001356416 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak2_81_91_-0.452602388456575_6.29726076182873_1.09572805394914 chr11 50252448 50253110 + 1.09572805394914 NA Intergenic Intergenic -14247 NR_132733 17001 Mm.245151 NM_008521 ENSMUSG00000020377 Ltc4s - leukotriene C4 synthase protein-coding common_peak2_54_65_-0.545561818007514_5.7716132103547_1.09506545297322 chr8 45410196 45410935 + 1.09506545297322 NA promoter-TSS (NM_126166) promoter-TSS (NM_126166) 54 NM_001357317 142980 Mm.33874 NM_126166 ENSMUSG00000031639 Tlr3 AI957183 toll-like receptor 3 protein-coding common_peak2_78_45_0.494005710218263_5.77056481116614_1.09506545297321 chr14 119099047 119099722 + 1.09506545297321 NA promoter-TSS (NM_001081252) promoter-TSS (NM_001081252) 50 NM_001081252 66435 Mm.213406 NM_025561 ENSMUSG00000042104 Uggt2 1810064L21Rik|3110001A05Rik|3110027P15Rik|A230065J02Rik|AW047562|Ugcgl2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding common_peak1_78_45_0.494005710218263_5.77056481116614_1.09506545297321 chr15 86066463 86067270 + 1.09506545297321 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 8139 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-7 chr3 146568204 146568698 + 1.09492971584134 NA Intergenic Intergenic -28698 NM_009474 22262 Mm.10865 NM_009474 ENSMUSG00000028186 Uox AI663847 urate oxidase protein-coding common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-4 chr3 9145364 9145743 + 1.09492971584134 NA Intergenic Intergenic 83589 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-10 chr3 121642094 121642546 + 1.09492971584134 NA intron (NR_036458, intron 1 of 2) intron (NR_036458, intron 1 of 2) 1165 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134 chr14 29967956 29968209 + 1.09492971584134 NA promoter-TSS (NM_019979) promoter-TSS (NM_019979) -298 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-12 chr5 115152639 115153108 + 1.09492971584134 NA intron (NM_175403, intron 1 of 4) intron (NM_175403, intron 1 of 4) 5303 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-2 chr11 32403838 32404348 + 1.09492971584134 NA intron (NM_177364, intron 7 of 12) intron (NM_177364, intron 7 of 12) -51277 NM_001361561 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-4 chr11 118013384 118013732 + 1.09492971584134 NA intron (NR_151726, intron 7 of 9) intron (NR_151726, intron 7 of 9) 11288 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-6 chr9 109055115 109055359 + 1.09492971584134 NA intron (NM_026381, intron 1 of 3) intron (NM_026381, intron 1 of 3) 371 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-10 chr8 23257390 23257675 + 1.09492971584134 NA promoter-TSS (NM_001042484) promoter-TSS (NM_001042484) -452 NM_001042484 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-9 chr3 103808991 103809308 + 1.09492971584134 NA promoter-TSS (NM_001163552) promoter-TSS (NM_001163552) 238 NM_133865 140917 Mm.374850 NM_133865 ENSMUSG00000027845 Dclre1b AI452214|Apollo|SNMIB|mSNM1B DNA cross-link repair 1B protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-9 chr18 32559710 32560180 + 1.09492971584134 NA promoter-TSS (NM_001048207) promoter-TSS (NM_001048207) 89 NM_001048207 71683 Mm.292145 NM_027863 ENSMUSG00000090523 Gypc 0610037F22Rik|Cd236r glycophorin C protein-coding common_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-3 chr2 26237009 26237390 + 1.09492971584134 NA exon (NM_001302956, exon 1 of 12) exon (NM_001302956, exon 1 of 12) 200 NM_153559 227638 Mm.116769 NM_153559 ENSMUSG00000036327 Qsox2 BC030934|Qscn6l1|Soxn quiescin Q6 sulfhydryl oxidase 2 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-8 chr3 41198586 41198974 + 1.09492971584134 NA Intergenic Intergenic -115734 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-13 chr8 124338897 124339399 + 1.09492971584134 NA intron (NM_139272, intron 14 of 15) intron (NM_139272, intron 14 of 15) 94788 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-3 chr13 38423064 38423501 + 1.09492971584134 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 38511 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA common_peak2_31_14_0.816094469036033_4.31493783012654_1.09492971584134 chr11 88420790 88421013 + 1.09492971584134 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 68128 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134 chr10 61696093 61696643 + 1.09492971584134 NA exon (NM_001272090, exon 1 of 4) exon (NM_001272090, exon 1 of 4) 782 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-8 chr17 46673890 46674233 + 1.09492971584134 NA TTS (NM_027910) TTS (NM_027910) 194 NM_144857 224823 Mm.45101 NM_144857 ENSMUSG00000023971 Rrp36 - ribosomal RNA processing 36 homolog (S. cerevisiae) protein-coding common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-7 chrX 71556061 71556469 + 1.09492971584134 NA intron (NM_001293623, intron 1 of 4) CpG 348 NM_001293625 15354 Mm.336087 NM_008253 ENSMUSG00000015217 Hmgb3 Hmg2a|Hmg4 high mobility group box 3 protein-coding common_peak2_31_14_0.816094469036033_4.31493783012654_1.09492971584134-3 chr3 137624313 137624626 + 1.09492971584134 NA intron (NM_030143, intron 2 of 2) intron (NM_030143, intron 2 of 2) 797 NM_030143 73284 Mm.250841 NM_030143 ENSMUSG00000046818 Ddit4l 1700037B15Rik|1700108M02Rik|REDD2|RTP801L|Smhs1 DNA-damage-inducible transcript 4-like protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-11 chr5 39636007 39636534 + 1.09492971584134 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 8361 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-5 chr2 180215001 180215533 + 1.09492971584134 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 10592 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134 chr11 74896703 74897087 + 1.09492971584134 NA 5' UTR (NM_197943, exon 1 of 23) 5' UTR (NM_197943, exon 1 of 23) 185 NM_197943 97761 Mm.245894 NM_197943 ENSMUSG00000038351 Sgsm2 D630003G22Rik|R74628|Rutbc1|mKIAA0397 small G protein signaling modulator 2 protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-12 chr6 34580181 34580662 + 1.09492971584134 NA Intergenic Intergenic -18083 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134 chr1 166409327 166409724 + 1.09492971584134 NA intron (NM_175170, intron 1 of 5) CpG 303 NM_001142948 71592 Mm.192094 NM_175170 ENSMUSG00000040596 Pogk 9130401E23Rik|BASS2|mKIAA1513 pogo transposable element with KRAB domain protein-coding common_peak1_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-2 chr17 23802569 23802873 + 1.09492971584134 NA promoter-TSS (NM_175229) promoter-TSS (NM_175229) -466 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_31_14_0.816094469036033_4.31493783012654_1.09492971584134-2 chr3 36481996 36482206 + 1.09492971584134 NA 3' UTR (NM_028183, exon 3 of 3) 3' UTR (NM_028183, exon 3 of 3) 6164 NM_028183 72282 Mm.55317 NM_028183 ENSMUSG00000027713 1810062G17Rik - RIKEN cDNA 1810062G17 gene protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-13 chr9 47544929 47545247 + 1.09492971584134 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 14736 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-9 chr6 17554103 17554418 + 1.09492971584134 NA intron (NM_008591, intron 16 of 21) intron (NM_008591, intron 16 of 21) -82750 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding common_peak2_30_14_0.770613923517508_4.29219755736727_1.09492971584134 chr12 112829738 112830012 + 1.09492971584134 NA promoter-TSS (NM_001359292) promoter-TSS (NM_001359292) -354 NM_001359234 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-2 chr15 76201841 76202141 + 1.09492971584134 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) -1384 NM_201390 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_30_14_0.770613923517508_4.29219755736727_1.09492971584134-2 chr17 31312360 31312662 + 1.09492971584134 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 16287 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-6 chr18 62162463 62162859 + 1.09492971584134 NA Intergenic Intergenic 17320 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-2 chr10 125969144 125969506 + 1.09492971584134 NA intron (NM_177152, intron 1 of 18) intron (NM_177152, intron 1 of 18) 3106 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-3 chr11 58008443 58008758 + 1.09492971584134 NA promoter-TSS (NM_028451) promoter-TSS (NM_028451) -464 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-11 chr5 66603215 66603536 + 1.09492971584134 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 15442 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-5 chr9 89874232 89874543 + 1.09492971584134 NA Intergenic Intergenic -35388 NM_001357744 19417 Mm.44561 NM_011245 ENSMUSG00000032356 Rasgrf1 AI844718|CDC25|CDC25Mm|Gnrp|Grf1|Grfbeta|P190-A|Ras-GRF1|p190|p190RhoGEF RAS protein-specific guanine nucleotide-releasing factor 1 protein-coding common_peak2_31_14_0.816094469036033_4.31493783012654_1.09492971584134-5 chr6 51119195 51119485 + 1.09492971584134 NA Intergenic Intergenic 150570 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-2 chr17 85090296 85090512 + 1.09492971584134 NA promoter-TSS (NM_001163624) promoter-TSS (NM_001163624) -130 NM_001163624 213760 Mm.259035 NM_145984 ENSMUSG00000024127 Prepl 2810457N15Rik|9530014L06Rik|D030028O16Rik|mKIAA0436 prolyl endopeptidase-like protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-4 chr13 27032485 27032927 + 1.09492971584134 NA Intergenic Intergenic -24864 NM_001163530 19109 Mm.1270 NM_011164 ENSMUSG00000021342 Prl AV290867|Gha1|Prl1a1 prolactin protein-coding unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-3 chr13 3743492 3743976 + 1.09492971584134 NA Intergenic Intergenic 60584 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-5 chr14 33313490 33313760 + 1.09492971584134 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 96802 NM_153800 239027 Mm.318350 NM_153800 ENSMUSG00000063506 Arhgap22 B230341L19Rik|RHOGAP2|p68RacGAP Rho GTPase activating protein 22 protein-coding common_peak2_31_14_0.816094469036033_4.31493783012654_1.09492971584134-4 chr5 64235589 64235858 + 1.09492971584134 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 5366 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-2 chr11 101658016 101658255 + 1.09492971584134 NA Intergenic CpG -7406 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak1_16_26_-0.938001665253772_4.28588666953658_1.09492971584134 chr14 29967829 29968202 + 1.09492971584134 NA promoter-TSS (NM_019979) promoter-TSS (NM_019979) -365 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-3 chr18 75170765 75171134 + 1.09492971584134 NA intron (NM_027727, intron 13 of 16) intron (NM_027727, intron 13 of 16) 126368 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-6 chr3 109157242 109157664 + 1.09492971584134 NA intron (NM_172685, intron 5 of 9) MIRb|SINE|MIR 34304 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-8 chr3 159847563 159848096 + 1.09492971584134 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 8179 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134 chr1 160040287 160040574 + 1.09492971584134 NA Intergenic Intergenic -3950 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-7 chr16 86385605 86386174 + 1.09492971584134 NA Intergenic Intergenic 420624 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-6 chr15 103304828 103305173 + 1.09492971584134 NA Intergenic Intergenic 5438 NM_030720 80910 Mm.160369 NM_030720 ENSMUSG00000063234 Gpr84 EX33 G protein-coupled receptor 84 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-7 chr19 40588623 40588992 + 1.09492971584134 NA promoter-TSS (NM_019698) promoter-TSS (NM_019698) -344 NM_153554 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-14 chrX 7697289 7697936 + 1.09492971584134 NA intron (NM_173747, intron 1 of 10) PB1D10|SINE|Alu 478 NM_173747 209416 Mm.148753 NM_173747 ENSMUSG00000031148 Gpkow 4432411B18|DXErtd697e|DXImx41e|T54 G patch domain and KOW motifs protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-5 chr17 45944231 45944522 + 1.09492971584134 NA Intergenic Intergenic -62924 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-6 chr9 44903518 44903956 + 1.09492971584134 NA Intergenic Intergenic 17005 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-3 chr11 104550752 104551228 + 1.09492971584134 NA promoter-TSS (NM_001285990) promoter-TSS (NM_001285990) 327 NM_010858 17896 Mm.390355 NM_010858 ENSMUSG00000061086 Myl4 ALC1|AMLC|ELC|ELC1a|GT1|MLC1EMB|MLC1a|Myla myosin, light polypeptide 4 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-4 chr14 20185569 20185946 + 1.09492971584134 NA Intergenic Intergenic -3975 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-10 chr4 55252623 55253427 + 1.09492971584134 NA Intergenic Intergenic -97017 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134 chr1 193296055 193296666 + 1.09492971584134 NA Intergenic Intergenic -5634 NM_008484 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-3 chr17 45789699 45790221 + 1.09492971584134 NA Intergenic Intergenic 55454 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-2 chr11 101448504 101448920 + 1.09492971584134 NA intron (NM_027320, intron 1 of 6) intron (NM_027320, intron 1 of 6) 300 NM_027320 70110 Mm.45558 NM_027320 ENSMUSG00000010358 Ifi35 2010008K16Rik|AW986054|IFP35|ifi-35 interferon-induced protein 35 protein-coding common_peak2_31_14_0.816094469036033_4.31493783012654_1.09492971584134-6 chr9 14054194 14054492 + 1.09492971584134 NA Intergenic Intergenic -221958 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-4 chr9 31318863 31319283 + 1.09492971584134 NA intron (NM_001080817, intron 3 of 20) intron (NM_001080817, intron 3 of 20) 3966 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-7 chr6 127990643 127990953 + 1.09492971584134 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 103176 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-5 chr8 84197209 84197430 + 1.09492971584134 NA Intergenic Intergenic -11199 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA unique_peak1_31_14_0.816094469036033_4.31493783012654_1.09492971584134-6 chr15 62568996 62569357 + 1.09492971584134 NA Intergenic Intergenic -349725 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_30_14_0.770613923517508_4.29219755736727_1.09492971584134-4 chr2 32547654 32548072 + 1.09492971584134 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) 12504 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding unique_peak2_16_26_-0.938001665253772_4.28588666953658_1.09492971584134-5 chr15 62127094 62127451 + 1.09492971584134 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 88015 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_219_217_-0.283461982572475_7.62645333349069_1.09406944262955 chr7 66376124 66377538 + 1.09406944262955 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 4893 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099 chr10 68273376 68273812 + 1.09394599973099 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 5132 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-8 chr19 29485764 29486034 + 1.09394599973099 NA Intergenic Intergenic 36088 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-25 chr9 105394956 105395219 + 1.09394599973099 NA promoter-TSS (NM_001357902) promoter-TSS (NM_001357902) 200 NM_172461 208583 Mm.347509 NM_172461 ENSMUSG00000035032 Nek11 4932416N14Rik NIMA (never in mitosis gene a)-related expressed kinase 11 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-15 chr8 110805600 110805995 + 1.09394599973099 NA 5' UTR (NM_001135100, exon 1 of 7) 5' UTR (NM_001135100, exon 1 of 7) 127 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-10 chr13 45507851 45508203 + 1.09394599973099 NA intron (NM_025508, intron 1 of 8) intron (NM_025508, intron 1 of 8) 583 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-6 chr18 34505580 34505890 + 1.09394599973099 NA intron (NM_146084, intron 1 of 20) intron (NM_146084, intron 1 of 20) 1088 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-8 chr12 51971471 51971799 + 1.09394599973099 NA promoter-TSS (NM_177171) promoter-TSS (NM_177171) -314 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-2 chr11 4595089 4595507 + 1.09394599973099 NA promoter-TSS (NM_028860) promoter-TSS (NM_028860) -483 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-3 chr10 111102057 111102511 + 1.09394599973099 NA Intergenic Intergenic -62518 NM_001003717 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding common_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-4 chr2 76406696 76406987 + 1.09394599973099 NA intron (NM_001290734, intron 1 of 24) CpG 333 NM_001290733 99031 Mm.240435 NM_145525 ENSMUSG00000042359 Osbpl6 1110062M20Rik|AI596402|ORP-6|mKIAA4128 oxysterol binding protein-like 6 protein-coding common_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099 chr10 86303043 86303331 + 1.09394599973099 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 2775 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099 chr1 155243106 155243388 + 1.09394599973099 NA Intergenic Intergenic 84544 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-3 chr12 70026613 70026963 + 1.09394599973099 NA non-coding (NR_104398, exon 25 of 29) non-coding (NR_104398, exon 25 of 29) -39786 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-10 chr7 128364286 128364663 + 1.09394599973099 NA Intergenic Intergenic 53698 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-3 chr14 32517432 32517933 + 1.09394599973099 NA intron (NM_001081221, intron 2 of 20) intron (NM_001081221, intron 2 of 20) 4161 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-9 chr12 76479299 76479632 + 1.09394599973099 NA Intergenic Intergenic 34968 NR_028520 100041694 Mm.259350 NR_028520 ENSMUSG00000073000 Gm10451 - predicted gene 10451 ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-17 chr19 57297287 57297648 + 1.09394599973099 NA Intergenic Intergenic 23507 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-18 chr2 49570390 49570681 + 1.09394599973099 NA Intergenic Intergenic -48779 NM_008449 16574 Mm.256342 NM_008449 ENSMUSG00000026764 Kif5c KINN|Khc|NKHC|NKHC2 kinesin family member 5C protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-4 chr14 20661295 20661528 + 1.09394599973099 NA exon (NM_001310431, exon 4 of 4) exon (NM_001310431, exon 4 of 4) 3163 NM_001310432 68760 Mm.35789 NM_175132 ENSMUSG00000039376 Synpo2l 1110054M18Rik|Chap synaptopodin 2-like protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-23 chr7 74107461 74107800 + 1.09394599973099 NA Intergenic Intergenic -93948 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-24 chr8 82384806 82385111 + 1.09394599973099 NA intron (NM_001254747, intron 1 of 7) intron (NM_001254747, intron 1 of 7) 17628 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-15 chr17 74264923 74265382 + 1.09394599973099 NA intron (NM_133771, intron 1 of 8) intron (NM_133771, intron 1 of 8) 29711 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-11 chr5 32033230 32033503 + 1.09394599973099 NA intron (NM_144541, intron 10 of 11) intron (NM_144541, intron 10 of 11) -103106 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-11 chr9 9093740 9094064 + 1.09394599973099 NA intron (NM_027823, intron 4 of 22) intron (NM_027823, intron 4 of 22) -142386 NR_045754 100579151 Mm.412450 NR_045754 ENSMUSG00000085253 Gm16833 - predicted gene, 16833 ncRNA unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-2 chr11 94212396 94212796 + 1.09394599973099 NA intron (NM_009427, intron 1 of 1) intron (NM_009427, intron 1 of 1) 1142 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-7 chr18 75409865 75410164 + 1.09394599973099 NA Intergenic Intergenic 42649 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-14 chr7 30122318 30122634 + 1.09394599973099 NA intron (NM_001362159, intron 1 of 4) intron (NM_001362159, intron 1 of 4) 544 NM_001362159 233060 Mm.443484 NM_001081007 ENSMUSG00000074220 Zfp382 4930428B01Rik|5930415A09Rik|KS1|Znf382 zinc finger protein 382 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-6 chr11 86588785 86589022 + 1.09394599973099 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -4745 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-2 chr1 178319637 178319873 + 1.09394599973099 NA intron (NM_025511, intron 1 of 3) intron (NM_025511, intron 1 of 3) 602 NM_025511 66359 Mm.489720 NM_025511 ENSMUSG00000026500 Cox20 2310005N03Rik|Fam36a COX20 Cox2 chaperone protein-coding common_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-5 chr8 92819865 92820157 + 1.09394599973099 NA Intergenic Intergenic -7286 NM_008610 17390 Mm.29564 NM_008610 ENSMUSG00000031740 Mmp2 Clg4a|GelA|MMP-2 matrix metallopeptidase 2 protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-7 chr2 60539208 60539479 + 1.09394599973099 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 13965 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-21 chr4 64092835 64093355 + 1.09394599973099 NA Intergenic Intergenic -46080 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-7 chr11 105183030 105183352 + 1.09394599973099 NA intron (NM_001361996, intron 1 of 19) intron (NM_001361996, intron 1 of 19) 1664 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-14 chr17 35551006 35551321 + 1.09394599973099 NA promoter-TSS (NM_001008424) promoter-TSS (NM_001008424) -965 NM_001008424 386463 Mm.426664 NM_001008424 ENSMUSG00000039518 Cdsn AI747712 corneodesmosin protein-coding common_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-2 chr12 75528101 75528392 + 1.09394599973099 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 67954 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-4 chr14 50870304 50870519 + 1.09394599973099 NA intron (NM_009351, intron 1 of 54) intron (NM_009351, intron 1 of 54) 143 NM_009351 21745 Mm.318736 NM_009351 ENSMUSG00000006281 Tep1 Tp1 telomerase associated protein 1 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-4 chr11 12396729 12397081 + 1.09394599973099 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 15235 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-13 chr16 59506176 59506446 + 1.09394599973099 NA exon (NM_174848, exon 15 of 19) exon (NM_174848, exon 15 of 19) 34536 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Riox2 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204|Mina ribosomal oxygenase 2 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-9 chr2 113444226 113444625 + 1.09394599973099 NA exon (NM_010230, exon 4 of 20) exon (NM_010230, exon 4 of 20) 3361 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_22_9_0.927980186482137_3.78591818812843_1.09394599973099 chr4 56374561 56374774 + 1.09394599973099 NA Intergenic Intergenic 366758 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099 chr1 71895887 71896376 + 1.09394599973099 NA Intergenic Intergenic 8019 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-5 chr18 75170878 75171115 + 1.09394599973099 NA intron (NM_027727, intron 13 of 16) intron (NM_027727, intron 13 of 16) 126321 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-19 chr2 110088309 110088779 + 1.09394599973099 NA Intergenic Intergenic -38065 NR_040508 75517 Mm.363927 NR_040508 ENSMUSG00000086186 Ccdc34os 1700024P03Rik coiled-coil domain containing 34, opposite strand ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-22 chr4 114504548 114504978 + 1.09394599973099 NA intron (NM_001085549, intron 2 of 6) intron (NM_001085549, intron 2 of 6) 98039 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-12 chr6 18241742 18241985 + 1.09394599973099 NA intron (NM_021050, intron 11 of 26) intron (NM_021050, intron 11 of 26) 71176 NM_021050 12638 Mm.15621 NM_021050 ENSMUSG00000041301 Cftr AW495489|Abcc7 cystic fibrosis transmembrane conductance regulator protein-coding common_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-3 chr17 88597284 88597474 + 1.09394599973099 NA Intergenic Intergenic -29176 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-8 chr4 7670824 7671107 + 1.09394599973099 NA Intergenic Intergenic 110277 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-10 chr4 124570756 124571026 + 1.09394599973099 NA intron (NR_045819, intron 1 of 2) intron (NR_045819, intron 1 of 2) 1712 NR_045819 108809 Mm.250313 NR_045819 4933407E24Rik - RIKEN cDNA 4933407E24 gene ncRNA unique_peak2_22_9_0.927980186482137_3.78591818812843_1.09394599973099 chr4 116721368 116721641 + 1.09394599973099 NA intron (NM_146151, intron 1 of 10) intron (NM_146151, intron 1 of 10) 549 NM_146151 230661 Mm.482431 NM_146151 ENSMUSG00000033985 Tesk2 - testis-specific kinase 2 protein-coding unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-13 chr7 19912126 19912458 + 1.09394599973099 NA intron (NM_027514, intron 4 of 7) intron (NM_027514, intron 4 of 7) 8851 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-9 chr7 96563176 96563399 + 1.09394599973099 NA intron (NM_011858, intron 5 of 32) intron (NM_011858, intron 5 of 32) -221323 NR_046043 670727 Mm.421352 NR_046043 ENSMUSG00000085751 Gm15412 - predicted gene 15412 ncRNA unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-5 chr11 77772869 77773299 + 1.09394599973099 NA Intergenic Intergenic -4151 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_22_9_0.927980186482137_3.78591818812843_1.09394599973099-2 chr5 43692163 43692485 + 1.09394599973099 NA intron (NM_001359906, intron 12 of 37) intron (NM_001359906, intron 12 of 37) 29945 NM_001359903 231214 Mm.44434 NM_172274 ENSMUSG00000039765 Cc2d2a 5730509K17Rik|b2b1035Clo coiled-coil and C2 domain containing 2A protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-11 chr13 81182546 81183078 + 1.09394599973099 NA intron (NM_054053, intron 85 of 89) intron (NM_054053, intron 85 of 89) 218738 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA common_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-6 chr18 84951151 84951414 + 1.09394599973099 NA exon (NM_025969, exon 1 of 6) exon (NM_025969, exon 1 of 6) 242 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik translocase of inner mitochondrial membrane 21 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-20 chr3 37886882 37887183 + 1.09394599973099 NA Intergenic Intergenic -11781 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-6 chrX 99470306 99470582 + 1.09394599973099 NA intron (NM_001290555, intron 1 of 1) CpG 291 NM_001083110 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-16 chr19 28658170 28658425 + 1.09394599973099 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -19927 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_10_19_-1.12864273314381_3.75760672831546_1.09394599973099-5 chr16 87261959 87262314 + 1.09394599973099 NA Intergenic Intergenic -92049 NM_001159331 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding unique_peak1_22_9_0.927980186482137_3.78591818812843_1.09394599973099-12 chr14 69089529 69089824 + 1.09394599973099 NA Intergenic Intergenic 60387 NM_009285 20855 Mm.20911 NM_009285 ENSMUSG00000014813 Stc1 Stc stanniocalcin 1 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989 chr1 72797084 72797400 + 1.09384600808989 NA Intergenic Intergenic -27238 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-17 chr6 127151696 127151906 + 1.09384600808989 NA promoter-TSS (NM_009829) promoter-TSS (NM_009829) -753 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-2 chr10 24487292 24487507 + 1.09384600808989 NA Intergenic Intergenic -108043 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-21 chr2 141309920 141310176 + 1.09384600808989 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -638572 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-23 chr3 65633998 65634187 + 1.09384600808989 NA Intergenic MER33|DNA|hAT-Charlie -25196 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-4 chr10 80114190 80114448 + 1.09384600808989 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1484 NM_001301853 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-36 chr7 83952626 83952848 + 1.09384600808989 NA intron (NM_030728, intron 21 of 28) intron (NM_030728, intron 21 of 28) 60737 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesd 2210015O11Rik|AW537813|Mesdc2|mKIAA0081|mesd|msd mesoderm development LRP chaperone protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-13 chr4 80921318 80921577 + 1.09384600808989 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 10761 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-4 chr11 79612285 79612505 + 1.09384600808989 NA intron (NR_003283, intron 2 of 2) intron (NR_003283, intron 2 of 2) 10768 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA unique_peak2_7_4_0.415166928903678_2.5295115593392_1.09384600808989 chrX 7767579 7767822 + 1.09384600808989 NA intron (NM_001105196, intron 4 of 8) intron (NM_001105196, intron 4 of 8) 3659 NM_001271491 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-14 chr5 36673283 36673500 + 1.09384600808989 NA intron (NM_001081232, intron 1 of 8) B1_Mur4|SINE|Alu 22630 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-11 chr3 126921421 126921622 + 1.09384600808989 NA TTS (NM_001327939) TTS (NM_001327939) 21865 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-31 chr5 135726709 135726899 + 1.09384600808989 NA intron (NM_008898, intron 2 of 15) intron (NM_008898, intron 2 of 15) 9085 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-5 chr11 68155293 68155480 + 1.09384600808989 NA intron (NM_018768, intron 7 of 7) intron (NM_018768, intron 7 of 7) -65506 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-14 chr5 21188024 21188225 + 1.09384600808989 NA intron (NR_153365, intron 1 of 26) intron (NR_153365, intron 1 of 26) 1857 NM_001359877 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-33 chr6 142280929 142281156 + 1.09384600808989 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) -2168 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-19 chr19 28245746 28245969 + 1.09384600808989 NA Intergenic URR1A|DNA|hAT-Charlie -234691 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-5 chr12 28123415 28123639 + 1.09384600808989 NA Intergenic Intergenic 424810 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-8 chr13 34190284 34190485 + 1.09384600808989 NA intron (NM_001033167, intron 10 of 10) intron (NM_001033167, intron 10 of 10) 27420 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-2 chr12 111599146 111599352 + 1.09384600808989 NA intron (NM_021516, intron 2 of 16) B3A|SINE|B2 24739 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-26 chr4 140816497 140816706 + 1.09384600808989 NA intron (NM_011059, intron 15 of 15) intron (NM_011059, intron 15 of 15) 5608 NR_045944 100049161 Mm.20854 NR_045944 ENSMUSG00000085918 Gm13032 - predicted gene 13032 ncRNA unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-32 chr6 135018921 135019145 + 1.09384600808989 NA exon (NM_026360, exon 9 of 12) exon (NM_026360, exon 9 of 12) 7421 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-9 chr18 60963229 60963419 + 1.09384600808989 NA promoter-TSS (NM_009792) promoter-TSS (NM_009792) -230 NM_009792 12322 Mm.131530 NM_009792 ENSMUSG00000024617 Camk2a CaMKII|R74975|mKIAA0968 calcium/calmodulin-dependent protein kinase II alpha protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-14 chr14 101783047 101783297 + 1.09384600808989 NA intron (NM_201529, intron 1 of 30) intron (NM_201529, intron 1 of 30) 53244 NM_201529 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-15 chr5 36975073 36975278 + 1.09384600808989 NA intron (NM_011716, intron 4 of 7) intron (NM_011716, intron 4 of 7) 13807 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-3 chr10 44093330 44093542 + 1.09384600808989 NA Intergenic Intergenic -77011 NR_001582 70365 Mm.87073 NR_001582 ENSMUSG00000091358 Speer5-ps1 1700007C10Rik|SPEER-5|Speer5-ps spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1 pseudo unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-13 chr14 76477762 76478059 + 1.09384600808989 NA intron (NM_207652, intron 1 of 2) B2_Mm1t|SINE|B2 -10526 NM_001177751 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989 chr10 31557937 31558194 + 1.09384600808989 NA intron (NM_001146349, intron 1 of 5) intron (NM_001146349, intron 1 of 5) 51660 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-6 chr12 112581528 112581771 + 1.09384600808989 NA Intergenic B3|SINE|B2 -7135 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-17 chr6 81944967 81945189 + 1.09384600808989 NA intron (NM_177884, intron 10 of 16) intron (NM_177884, intron 10 of 16) 20871 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-38 chr9 86950625 86950957 + 1.09384600808989 NA Intergenic B2_Mm2|SINE|B2 -64746 NM_001037907 382089 Mm.92244 NM_001037907 ENSMUSG00000047897 Ripply2 C030002E08Rik|Gm1122 ripply transcriptional repressor 2 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-18 chr18 69592559 69592751 + 1.09384600808989 NA intron (NM_001361128, intron 8 of 19) intron (NM_001361128, intron 8 of 19) 246495 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-11 chr13 73772647 73772883 + 1.09384600808989 NA intron (NM_001360694, intron 1 of 24) intron (NM_001360694, intron 1 of 24) 9068 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-3 chr1 183623008 183623196 + 1.09384600808989 NA Intergenic Intergenic -125875 NR_151520 102637191 Mm.417076 NR_151520 ENSMUSG00000103305 Gm34068 - predicted gene, 34068 ncRNA unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-29 chr5 31563398 31563612 + 1.09384600808989 NA Intergenic L1MC1|LINE|L1 7892 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-16 chr6 121064188 121064422 + 1.09384600808989 NA promoter-TSS (NR_138098) promoter-TSS (NR_138098) -159 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-7 chr14 20639912 20640112 + 1.09384600808989 NA Intergenic Intergenic 16528 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-20 chr7 80198229 80198445 + 1.09384600808989 NA promoter-TSS (NM_001360135) promoter-TSS (NM_001360135) -104 NM_001360135 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-24 chr3 152355546 152355737 + 1.09384600808989 NA intron (NM_001355666, intron 1 of 21) intron (NM_001355666, intron 1 of 21) 9163 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-6 chr13 31475319 31475525 + 1.09384600808989 NA Intergenic Intergenic -82748 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-35 chr7 66604510 66604715 + 1.09384600808989 NA Intergenic Intergenic 84949 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-6 chr12 73811734 73811927 + 1.09384600808989 NA Intergenic Intergenic -89494 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-12 chr4 10403322 10403541 + 1.09384600808989 NA Intergenic Intergenic 394371 NR_045185 73624 Mm.67392 NR_045185 ENSMUSG00000086080 1700123O12Rik - RIKEN cDNA 1700123O12 gene ncRNA unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-8 chr18 38151578 38151808 + 1.09384600808989 NA Intergenic Intergenic 58069 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-5 chr10 87999794 88000054 + 1.09384600808989 NA Intergenic Intergenic 33253 NR_000040 22172 Mm.391420 NR_000040 Tyms-ps - thymidylate synthase, pseudogene pseudo unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-15 chr5 104127712 104127921 + 1.09384600808989 NA Intergenic Intergenic -13728 NM_001359016 13602 Mm.29027 NM_010097 ENSMUSG00000029309 Sparcl1 Ecm2|Sc1|hevin|mast9 SPARC-like 1 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-28 chr5 3646614 3646817 + 1.09384600808989 NA intron (NM_026033, intron 2 of 4) intron (NM_026033, intron 2 of 4) 1221 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|Odag GATA zinc finger domain containing 1 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-9 chr13 35809615 35809836 + 1.09384600808989 NA intron (NM_009881, intron 4 of 9) intron (NM_009881, intron 4 of 9) 68323 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-16 chr16 34962245 34962466 + 1.09384600808989 NA intron (NM_139300, intron 21 of 31) intron (NM_139300, intron 21 of 31) -3361 NR_045723 278725 Mm.436927 NR_045722 E130310I04Rik A930019C19Rik RIKEN cDNA E130310I04 gene ncRNA unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-27 chr4 141458156 141458397 + 1.09384600808989 NA intron (NM_009541, intron 2 of 15) intron (NM_009541, intron 2 of 15) 13603 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-15 chr16 11015143 11015347 + 1.09384600808989 NA TTS (NR_040518) TTS (NR_040518) 6347 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-19 chr9 15508220 15508407 + 1.09384600808989 NA intron (NM_133214, intron 1 of 2) intron (NM_133214, intron 1 of 2) 2818 NM_133214 170748 Mm.86572 NM_133214 ENSMUSG00000058173 Smco4 Fn5 single-pass membrane protein with coiled-coil domains 4 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-22 chr3 54543423 54543655 + 1.09384600808989 NA Intergenic Intergenic -149276 NR_152185 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-20 chr2 91264028 91264218 + 1.09384600808989 NA promoter-TSS (NM_001166024) promoter-TSS (NM_001166024) -992 NM_001166024 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989 chr1 131122791 131122995 + 1.09384600808989 NA Intergenic Intergenic 15341 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-19 chr6 140543365 140543565 + 1.09384600808989 NA intron (NM_144920, intron 10 of 30) intron (NM_144920, intron 10 of 30) -79198 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-10 chr2 78794115 78794318 + 1.09384600808989 NA Intergenic Intergenic -74831 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-30 chr5 92849662 92849918 + 1.09384600808989 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 40408 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-21 chr8 94326063 94326265 + 1.09384600808989 NA Intergenic Intergenic 1853 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-10 chr2 30205478 30205671 + 1.09384600808989 NA intron (NM_172404, intron 1 of 13) intron (NM_172404, intron 1 of 13) 273 NM_001356475 70266 Mm.216089 NM_172404 ENSMUSG00000039648 Kyat1 2010009K05Rik|AI182306|Ccbl1|Gtk|Kat1|KatI kynurenine aminotransferase 1 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-8 chr16 18423154 18423375 + 1.09384600808989 NA intron (NM_007744, intron 1 of 4) intron (NM_007744, intron 1 of 4) -3153 NM_001353143 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-37 chr9 49824504 49824720 + 1.09384600808989 NA Intergenic Intergenic -25219 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-4 chr10 96806026 96806224 + 1.09384600808989 NA Intergenic RSINE1|SINE|B4 189124 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-34 chr7 19627936 19628220 + 1.09384600808989 NA intron (NM_001290457, intron 1 of 10) intron (NM_001290457, intron 1 of 10) 1360 NM_001290457 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989 chr1 83586819 83587077 + 1.09384600808989 NA Intergenic Intergenic -178748 NM_001356547 77629 Mm.154303 NM_172430 ENSMUSG00000026163 Sphkap 4930544G21Rik|A930009L15Rik|AI852220|SKIP|mKIAA1678 SPHK1 interactor, AKAP domain containing protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-11 chr3 129829288 129829497 + 1.09384600808989 NA exon (NM_026578, exon 3 of 7) exon (NM_026578, exon 3 of 7) 2004 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-7 chr13 41605426 41605613 + 1.09384600808989 NA promoter-TSS (NM_001163572) promoter-TSS (NM_001163572) -697 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-25 chr4 128794511 128794704 + 1.09384600808989 NA intron (NM_001081098, intron 2 of 8) intron (NM_001081098, intron 2 of 8) 11505 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-18 chr8 34760930 34761120 + 1.09384600808989 NA Intergenic Intergenic -46585 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-7 chr12 95589451 95589649 + 1.09384600808989 NA Intergenic Intergenic -102676 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-17 chr18 63416274 63416467 + 1.09384600808989 NA Intergenic Intergenic -29187 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding common_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989 chr16 23423512 23423761 + 1.09384600808989 NA Intergenic 7SK|RNA|RNA -5497 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-2 chr10 60801741 60802000 + 1.09384600808989 NA intron (NM_029770, intron 1 of 16) RLTR20A4|LTR|ERVK 29711 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-13 chr4 140610434 140610633 + 1.09384600808989 NA exon (NM_172415, exon 4 of 28) exon (NM_172415, exon 4 of 28) 38223 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-9 chr2 51930996 51931206 + 1.09384600808989 NA intron (NM_001355608, intron 1 of 3) intron (NM_001355608, intron 1 of 3) 2234 NM_001355607 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-12 chr14 20228369 20228569 + 1.09384600808989 NA Intergenic Intergenic 40693 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-16 chr6 34630675 34630865 + 1.09384600808989 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 32266 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-12 chr4 64065278 64065487 + 1.09384600808989 NA Intergenic Intergenic -18367 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak2_8_4_0.583893112931831_2.61387465135328_1.09384600808989 chr19 9060456 9060662 + 1.09384600808989 NA intron (NM_001286518, intron 6 of 6) MTE2b|LTR|ERVL-MaLR 27397 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-3 chr11 28955501 28955713 + 1.09384600808989 NA Intergenic Intergenic 102402 NM_146015 216616 Mm.44176 NM_146015 ENSMUSG00000020467 Efemp1 - epidermal growth factor-containing fibulin-like extracellular matrix protein 1 protein-coding unique_peak1_7_4_0.415166928903678_2.5295115593392_1.09384600808989-2 chr1 89841969 89842181 + 1.09384600808989 NA intron (NM_001037136, intron 14 of 16) intron (NM_001037136, intron 14 of 16) 89101 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding unique_peak1_8_4_0.583893112931831_2.61387465135328_1.09384600808989-10 chr13 41774629 41774839 + 1.09384600808989 NA intron (NM_001145875, intron 5 of 6) intron (NM_001145875, intron 5 of 6) 72754 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak2_4_7_-0.936193097881838_2.53190345105908_1.09384600808989-18 chr6 131294534 131294787 + 1.09384600808989 NA Intergenic MIRc|SINE|MIR -1416 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding common_peak2_122_130_-0.381627831709557_6.84260908568267_1.09368619089401 chr4 141310735 141312209 + 1.09368619089401 NA intron (NM_010139, intron 3 of 16) intron (NM_010139, intron 3 of 16) 10251 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak2_162_166_-0.328561302749628_7.21942364109924_1.09352425346139 chr6 134035050 134036826 + 1.09352425346139 NA 5' UTR (NM_007961, exon 1 of 8) 5' UTR (NM_007961, exon 1 of 8) 238 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak2_35_17_0.721786247230392_4.53081812505751_1.09210977391291-3 chr8 11399955 11400208 + 1.09210977391291 NA intron (NM_009932, intron 6 of 47) intron (NM_009932, intron 6 of 47) -77848 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_35_17_0.721786247230392_4.53081812505751_1.09210977391291 chr17 24849829 24850183 + 1.09210977391291 NA promoter-TSS (NM_024284) promoter-TSS (NM_024284) 296 NM_023480 68636 Mm.347964 NM_023480 ENSMUSG00000045316 Fahd1 1110025H10Rik|AV002085 fumarylacetoacetate hydrolase domain containing 1 protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-5 chr4 89127301 89127784 + 1.09210977391291 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 684 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-5 chr3 84609923 84610264 + 1.09210977391291 NA Intergenic Intergenic 16519 NM_207278 403175 Mm.83086 NM_207278 ENSMUSG00000047819 Tigd4 C130063O11Rik|Gm418 tigger transposable element derived 4 protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-8 chr6 22378739 22379334 + 1.09210977391291 NA Intergenic Intergenic -22955 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak2_35_17_0.721786247230392_4.53081812505751_1.09210977391291-2 chr3 109122643 109122879 + 1.09210977391291 NA promoter-TSS (NM_172685) promoter-TSS (NM_172685) -388 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-10 chr9 65402862 65403060 + 1.09210977391291 NA intron (NM_001162923, intron 2 of 4) intron (NM_001162923, intron 2 of 4) 4473 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-9 chr9 44488949 44489441 + 1.09210977391291 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) 6370 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-6 chr5 34370199 34370750 + 1.09210977391291 NA intron (NM_001243123, intron 1 of 20) CpG 541 NM_001243123 231128 Mm.286885 NM_001030306 ENSMUSG00000037210 Fam193a - family with sequence similarity 193, member A protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291 chr11 61972021 61972719 + 1.09210977391291 NA intron (NM_001310526, intron 1 of 7) L1Md_F2|LINE|L1 15607 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-6 chr4 99828911 99829337 + 1.09210977391291 NA promoter-TSS (NM_145549) promoter-TSS (NM_145549) -6 NM_026348 67733 Mm.257094 NM_026348 ENSMUSG00000028549 Itgb3bp 4930471O16Rik|AU022583 integrin beta 3 binding protein (beta3-endonexin) protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-7 chr4 107569732 107570438 + 1.09210977391291 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 113504 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-7 chr5 147448448 147448976 + 1.09210977391291 NA intron (NM_028291, intron 1 of 18) intron (NM_028291, intron 1 of 18) 18556 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-4 chr2 109678377 109678766 + 1.09210977391291 NA intron (NM_001285419, intron 1 of 1) intron (NM_001285419, intron 1 of 1) 1539 NM_001285419 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-4 chr3 137331122 137331774 + 1.09210977391291 NA Intergenic Intergenic -9630 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-11 chr9 108808431 108808973 + 1.09210977391291 NA intron (NM_030729, intron 1 of 12) CpG 322 NM_030729 80987 Mm.192416 NM_030729 ENSMUSG00000032598 Nckipsd AF3P21|DIP1|ORF1|SPIN90|WASLBP|WISH|Wasbp NCK interacting protein with SH3 domain protein-coding unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-2 chr11 104618870 104619407 + 1.09210977391291 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 11138 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291 chr19 16949029 16949473 + 1.09210977391291 NA Intergenic Intergenic -6867 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-2 chr2 30744385 30744960 + 1.09210977391291 NA Intergenic Intergenic 23462 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-3 chr12 16868902 16869365 + 1.09210977391291 NA Intergenic Intergenic -25845 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-3 chr2 102451346 102451802 + 1.09210977391291 NA exon (NM_010218, exon 1 of 1) exon (NM_010218, exon 1 of 1) 218 NM_010218 14221 Mm.29730 NM_010218 ENSMUSG00000075012 Fjx1 - four jointed box 1 protein-coding common_peak1_35_17_0.721786247230392_4.53081812505751_1.09210977391291-8 chr5 150673961 150674278 + 1.09210977391291 NA intron (NM_175310, intron 1 of 34) CpG 292 NM_001346503 100710 Mm.32959 NM_175310 ENSMUSG00000034021 Pds5b AI646570|AS3|AW212954|Aprin|Tg(Wap-ERBB2)229Wzw|WAP-Her-2|mKIAA0979 PDS5 cohesin associated factor B protein-coding common_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-6 chr9 98434360 98434987 + 1.0921097739129 NA intron (NM_011254, intron 2 of 3) intron (NM_011254, intron 2 of 3) 11712 NM_011254 19659 Mm.279741 NM_011254 ENSMUSG00000046402 Rbp1 CRBPI|Crbp|Rbp-1 retinol binding protein 1, cellular protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-4 chr18 35865067 35865508 + 1.0921097739129 NA Intergenic Intergenic 10600 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129 chr1 162464991 162465485 + 1.0921097739129 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 12796 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-3 chr2 118108578 118109100 + 1.0921097739129 NA intron (NR_126479, intron 1 of 9) intron (NR_126479, intron 1 of 9) 2363 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-5 chr2 60881649 60881987 + 1.0921097739129 NA promoter-TSS (NM_001141931) promoter-TSS (NM_001141931) -380 NM_001141931 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129 chr11 121747506 121747721 + 1.0921097739129 NA Intergenic Intergenic 45186 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-2 chr13 41748333 41748926 + 1.0921097739129 NA Intergenic Intergenic 98859 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding common_peak1_20_30_-0.834606634794251_4.53689299298975_1.0921097739129 chr6 142276371 142276577 + 1.0921097739129 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) 2400 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding unique_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-3 chr16 30188467 30188975 + 1.0921097739129 NA Intergenic Intergenic 78811 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-2 chr12 91848752 91849143 + 1.0921097739129 NA intron (NM_001039089, intron 1 of 20) CpG 210 NM_001039089 20338 Mm.250605 NM_011344 ENSMUSG00000020964 Sel1l AW493766|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) protein-coding unique_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-4 chr19 4099388 4099752 + 1.0921097739129 NA promoter-TSS (NR_075078) promoter-TSS (NR_075078) -428 NR_075078 18739 Mm.1860 NM_008851 ENSMUSG00000024851 Pitpnm1 DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1 phosphatidylinositol transfer protein, membrane-associated 1 protein-coding common_peak1_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-2 chr9 55937747 55937955 + 1.0921097739129 NA intron (NM_001357652, intron 1 of 32) CpG 268 NM_001357652 244891 Mm.86588 NM_175536 ENSMUSG00000034007 Scaper C430017I08|D530014O03Rik|Zfp291 S phase cyclin A-associated protein in the ER protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-3 chr17 34626195 34626917 + 1.0921097739129 NA exon (NM_001302394, exon 3 of 9) exon (NM_001302394, exon 3 of 9) 592 NM_019441 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding unique_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-3 chr13 60051911 60052349 + 1.0921097739129 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 22419 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129 chr13 98944830 98945429 + 1.0921097739129 NA Intergenic Intergenic -18745 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding unique_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129 chr1 106171737 106172086 + 1.0921097739129 NA promoter-TSS (NR_040630) promoter-TSS (NR_040630) 42 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-7 chr7 105751623 105752006 + 1.0921097739129 NA intron (NM_009906, intron 2 of 12) intron (NM_009906, intron 2 of 12) 421 NM_009906 12751 Mm.20837 NM_009906 ENSMUSG00000030894 Tpp1 Cln2|LPIC|TPP-1|TPP-I tripeptidyl peptidase I protein-coding common_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-2 chr16 11134945 11135529 + 1.0921097739129 NA promoter-TSS (NM_029582) promoter-TSS (NM_029582) -705 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak1_19_30_-0.904499367415201_4.50194662667927_1.0921097739129 chr2 3135339 3135623 + 1.0921097739129 NA intron (NM_001347067, intron 1 of 7) intron (NM_001347067, intron 1 of 7) 16796 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding unique_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-2 chr13 73937762 73938232 + 1.0921097739129 NA promoter-TSS (NM_027182) promoter-TSS (NM_027182) 186 NM_001308041 105246 Mm.278509 NM_001024508 ENSMUSG00000057649 Brd9 AL022779 bromodomain containing 9 protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-6 chr2 156065177 156065483 + 1.0921097739129 NA 5' UTR (NM_139151, exon 1 of 12) 5' UTR (NM_139151, exon 1 of 12) 117 NM_139151 245865 Mm.330713 NM_139151 ENSMUSG00000038180 Spag4 1700041K21Rik|MNCb-0953|Sun4|mKIAA4118 sperm associated antigen 4 protein-coding common_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-4 chr4 58184066 58184507 + 1.0921097739129 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 22310 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak2_20_30_-0.834606634794251_4.53689299298975_1.0921097739129-5 chr4 89478757 89479068 + 1.0921097739129 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -167880 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-4 chr2 19666249 19666791 + 1.0921097739129 NA Intergenic Intergenic 8458 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding common_peak2_19_30_-0.904499367415201_4.50194662667927_1.0921097739129-8 chr9 73905502 73905949 + 1.0921097739129 NA intron (NM_001081153, intron 1 of 30) intron (NM_001081153, intron 1 of 30) 27842 NM_001081153 208898 Mm.41035 NM_001081153 ENSMUSG00000062151 Unc13c 1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3 unc-13 homolog C (C. elegans) protein-coding common_peak1_148_94_0.356641788194318_6.74817650242811_1.09141639117374 chr14 47297940 47299330 + 1.09141639117374 NA intron (NM_178684, intron 1 of 3) CpG 361 NM_001360542 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak1_114_122_-0.387059284362351_6.74898486315806_1.09141639117371 chr8 107488752 107489852 + 1.09141639117371 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) 52904 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_142_148_-0.351549967201028_7.04339353686165_1.09030195611949 chr10 128059095 128060417 + 1.09030195611949 NA intron (NM_019766, intron 1 of 7) CpG 774 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 protein-coding common_peak1_403_281_0.215836587712131_8.24746964625486_1.08946277236555 chr13 63240102 63243440 + 1.08946277236555 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 1742 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_67_78_-0.501004870413896_6.05327831297016_1.08891495595796 chr9 41478092 41479447 + 1.08891495595796 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 3876 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_89_99_-0.439543021921385_6.42408467881403_1.08827492950083 chr1 58423380 58424035 + 1.08827492950083 NA intron (NM_001042634, intron 1 of 12) CpG 381 NR_027854 12747 Mm.1761 NM_009905 ENSMUSG00000026034 Clk1 STY CDC-like kinase 1 protein-coding common_peak2_120_74_0.399492070480444_6.4285647257361_1.08827492950083-2 chr8 72240015 72240664 + 1.08827492950083 NA intron (NM_007456, intron 1 of 11) CpG 321 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak2_120_74_0.399492070480444_6.4285647257361_1.08827492950083 chr7 109545130 109546102 + 1.08827492950083 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 25484 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak1_120_74_0.399492070480444_6.4285647257361_1.08827492950083 chr5 139795311 139796925 + 1.08827492950083 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 4582 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_163_167_-0.328412834751567_7.22811100540298_1.08823717930613 chr11 120233570 120235231 + 1.08823717930613 NA intron (NM_198423, intron 1 of 27) CpG 1453 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_65_36_0.550557639195564_5.48473218522673_1.0880568139457-3 chr8 94037307 94038146 + 1.0880568139457 NA promoter-TSS (NM_026623) promoter-TSS (NM_026623) 528 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding unique_peak1_65_36_0.550557639195564_5.48473218522673_1.0880568139457 chr4 137286182 137287320 + 1.0880568139457 NA intron (NM_009523, intron 1 of 4) intron (NM_009523, intron 1 of 4) 9116 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding common_peak1_65_36_0.550557639195564_5.48473218522673_1.0880568139457-2 chr5 4758253 4759032 + 1.0880568139457 NA promoter-TSS (NM_021457) promoter-TSS (NM_021457) -426 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding common_peak1_65_36_0.550557639195564_5.48473218522673_1.0880568139457-4 chr9 67228406 67229118 + 1.0880568139457 NA intron (NM_001081242, intron 54 of 57) intron (NM_001081242, intron 54 of 57) 7964 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak2_65_36_0.550557639195564_5.48473218522673_1.0880568139457 chr1 53784566 53785101 + 1.0880568139457 NA intron (NM_133810, intron 1 of 7) CpG 382 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_65_36_0.550557639195564_5.48473218522673_1.0880568139457 chr12 3570939 3571438 + 1.0880568139457 NA Intergenic Intergenic -1203 NM_001162465 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak1_43_54_-0.602184310927599_5.48026755806086_1.08805681394569 chr17 35969115 35969737 + 1.08805681394569 NA intron (NM_013854, intron 1 of 22) CpG 324 NM_013854 224742 Mm.329022 NM_013854 ENSMUSG00000038762 Abcf1 AU041969|Abc50|D17Wsu166e|GCN20 ATP-binding cassette, sub-family F (GCN20), member 1 protein-coding common_peak1_43_54_-0.602184310927599_5.48026755806086_1.08805681394569-2 chr8 34287454 34287911 + 1.08805681394569 NA Intergenic Intergenic -120970 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak2_43_54_-0.602184310927599_5.48026755806086_1.08805681394569 chr12 8386358 8387106 + 1.08805681394569 NA Intergenic Intergenic 73299 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_185_187_-0.310358689470646_7.39940950694231_1.08710662483959 chr15 85573005 85574669 + 1.08710662483959 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 4233 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-19 chr14 78935188 78935608 + 1.08658567012551 NA intron (NM_027906, intron 8 of 44) intron (NM_027906, intron 8 of 44) 86220 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-4 chr1 132349208 132349740 + 1.08658567012551 NA Intergenic Intergenic 18474 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-17 chr17 65628325 65628701 + 1.08658567012551 NA Intergenic Intergenic 11243 NM_153519 213272 Mm.255732 NM_153519 ENSMUSG00000050612 Txndc2 AU021712|Sptrx-1|Sptrx1|Trx4 thioredoxin domain containing 2 (spermatozoa) protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-2 chr1 164275715 164275939 + 1.08658567012551 NA intron (NM_029115, intron 1 of 5) intron (NM_029115, intron 1 of 5) 229 NM_029115 74895 Mm.167258 NM_029115 ENSMUSG00000026578 Ccdc181 4930455F23Rik|AI427889 coiled-coil domain containing 181 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-24 chr6 113067176 113067709 + 1.08658567012551 NA TTS (NR_027010) TTS (NR_027010) 9802 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-12 chr15 97826387 97826615 + 1.08658567012551 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 5266 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-32 chr9 96953007 96953478 + 1.08658567012551 NA intron (NM_145134, intron 2 of 2) intron (NM_145134, intron 2 of 2) -63768 NM_001289647 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-9 chr8 86501854 86502066 + 1.08658567012551 NA Intergenic Intergenic 64630 NM_172912 244562 Mm.67485 NM_172912 ENSMUSG00000036872 Abcc12 4930467B22Rik|MRP9 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-9 chr10 80475560 80475805 + 1.08658567012551 NA Intergenic CpG -19224 NM_139226 246086 Mm.250572 NM_139226 ENSMUSG00000045518 Onecut3 OC-3|Oc3 one cut domain, family member 3 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-28 chr17 71285633 71285936 + 1.08658567012551 NA intron (NM_001357337, intron 2 of 7) intron (NM_001357337, intron 2 of 7) 25227 NM_001357337 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-14 chr15 87625258 87625551 + 1.08658567012551 NA exon (NM_134096, exon 1 of 4) exon (NM_134096, exon 1 of 4) 174 NM_134096 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding common_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-3 chr18 62161302 62161509 + 1.08658567012551 NA Intergenic Intergenic 18576 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-29 chr8 94324493 94324711 + 1.08658567012551 NA TTS (NR_029552) TTS (NR_029552) 291 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551 chr1 40790812 40791052 + 1.08658567012551 NA promoter-TSS (NM_172499) promoter-TSS (NM_172499) -275 NM_172499 211798 Mm.235443 NM_172499 ENSMUSG00000041945 Mfsd9 4931419K03Rik major facilitator superfamily domain containing 9 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-12 chr11 58332000 58332474 + 1.08658567012551 NA intron (NM_001308167, intron 2 of 6) intron (NM_001308167, intron 2 of 6) 1447 NM_001308168 79566 Mm.290534 NM_024480 ENSMUSG00000013646 Sh3bp5l 2310074E09Rik|BC003251|mKIAA1720 SH3 binding domain protein 5 like protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-27 chr6 94789835 94790074 + 1.08658567012551 NA Intergenic Intergenic 7098 NR_035483 unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-4 chr10 60569350 60569622 + 1.08658567012551 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 127004 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-11 chr15 33250447 33250772 + 1.08658567012551 NA intron (NM_176073, intron 3 of 7) intron (NM_176073, intron 3 of 7) 155330 NR_033608 73486 Mm.483393 NM_028551 ENSMUSG00000058101 1700084J12Rik - ribosomal protein L7-like 1 pseudogene pseudo common_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-4 chr18 62691485 62691749 + 1.08658567012551 NA intron (NM_001168423, intron 1 of 4) intron (NM_001168423, intron 1 of 4) 49770 NM_001168423 100038417 Mm.387557 NM_001168423 ENSMUSG00000073551 Spink13 Gm10534|Spink5l3 serine peptidase inhibitor, Kazal type 13 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-5 chr1 160279507 160279773 + 1.08658567012551 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) 16332 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-6 chr12 84997057 84997453 + 1.08658567012551 NA exon (NM_178363, exon 1 of 21) exon (NM_178363, exon 1 of 21) 934 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-51 chr8 47655510 47655826 + 1.08658567012551 NA Intergenic Intergenic 19491 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-49 chr7 127393080 127393302 + 1.08658567012551 NA intron (NM_198011, intron 1 of 2) CpG 430 NM_198011 101604 Mm.334241 NM_198011 ENSMUSG00000078580 E430018J23Rik AI480612 RIKEN cDNA E430018J23 gene protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-20 chr2 167504902 167505211 + 1.08658567012551 NA intron (NR_153838, intron 1 of 4) intron (NR_153838, intron 1 of 4) 1613 NM_001360930 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-22 chr4 117891367 117891720 + 1.08658567012551 NA intron (NM_026344, intron 1 of 5) intron (NM_026344, intron 1 of 5) 460 NM_026344 67728 Mm.13823 NM_026344 ENSMUSG00000028540 Dph2 9130020C19Rik|AI467389|Dph2l2 DPH2 homolog protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-11 chr13 104513712 104514034 + 1.08658567012551 NA Intergenic MLT1O|LTR|ERVL-MaLR 226038 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-21 chr15 62140933 62141191 + 1.08658567012551 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 78389 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-6 chr1 184060025 184060438 + 1.08658567012551 NA intron (NM_022019, intron 2 of 3) MLT1A|LTR|ERVL-MaLR 25850 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-2 chr4 123803177 123803520 + 1.08658567012551 NA intron (NM_183163, intron 1 of 7) intron (NM_183163, intron 1 of 7) -10283 NM_001356445 230726 Mm.37334 NM_183163 ENSMUSG00000043333 Rhbdl2 9130416B15|RRP2 rhomboid like 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-13 chr12 108275961 108276194 + 1.08658567012551 NA promoter-TSS (NM_001159910) promoter-TSS (NM_001159910) -660 NM_001159910 668158 Mm.482792 NM_001159910 ENSMUSG00000084883 Ccdc85c EG668158|Gm265|Gm9010|hhy coiled-coil domain containing 85C protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-35 chr2 93405634 93406043 + 1.08658567012551 NA intron (NR_040529, intron 2 of 5) intron (NR_040529, intron 2 of 5) 2291 NR_040529 639658 Mm.66880 NR_040529 ENSMUSG00000085852 Gm13807 - predicted gene 13807 ncRNA unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-41 chr4 119559054 119559412 + 1.08658567012551 NA intron (NM_001357177, intron 1 of 12) intron (NM_001357177, intron 1 of 12) 16897 NM_001357177 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-5 chr19 36083370 36083574 + 1.08658567012551 NA promoter-TSS (NM_019428) promoter-TSS (NM_019428) -244 NM_019428 54364 Mm.277891 NM_019428 ENSMUSG00000024800 Rpp30 Rnasep2|TSG15 ribonuclease P/MRP 30 subunit protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-6 chr12 13144891 13145141 + 1.08658567012551 NA Intergenic Intergenic 104158 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-30 chr19 3325743 3325984 + 1.08658567012551 NA intron (NM_013495, intron 1 of 18) intron (NM_013495, intron 1 of 18) 2562 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-25 chr7 142088098 142088356 + 1.08658567012551 NA intron (NM_008748, intron 3 of 6) intron (NM_008748, intron 3 of 6) 7057 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-32 chr19 44663267 44663486 + 1.08658567012551 NA Intergenic Intergenic -94018 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-3 chr1 132153543 132153882 + 1.08658567012551 NA Intergenic Intergenic -14027 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-21 chr4 21972518 21972792 + 1.08658567012551 NA intron (NM_175234, intron 4 of 5) intron (NM_175234, intron 4 of 5) 41329 NM_175234 76132 Mm.159689 NM_175234 ENSMUSG00000028246 Faxc 6230409E13Rik|AW742931 failed axon connections homolog protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-19 chr2 25029487 25029796 + 1.08658567012551 NA exon (NM_146251, exon 21 of 35) exon (NM_146251, exon 21 of 35) -24738 NM_001177654 56876 Mm.42956 NM_020276 ENSMUSG00000006476 Nsmf Jacob|Nelf NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-31 chr9 95151189 95151669 + 1.08658567012551 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 255841 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-2 chr1 90230788 90231039 + 1.08658567012551 NA Intergenic Intergenic 26933 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-30 chr8 120666414 120666799 + 1.08658567012551 NA intron (NM_010926, intron 1 of 4) intron (NM_010926, intron 1 of 4) 1506 NM_010926 18117 Mm.2136 NM_010926 ENSMUSG00000031819 Emc8 Cox4nb|Fam158b|Noc4 ER membrane protein complex subunit 8 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-22 chr4 62743388 62743662 + 1.08658567012551 NA Intergenic Intergenic 69551 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-7 chr3 101069654 101069870 + 1.08658567012551 NA intron (NM_011197, intron 4 of 8) intron (NM_011197, intron 4 of 8) -40267 NM_001167906 630146 Mm.190915 NM_001099332 ENSMUSG00000086564 Cd101 EWI-101|Gm1016|Gm734|Igsf2 CD101 antigen protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-5 chr12 8899704 8900114 + 1.08658567012551 NA Intergenic Intergenic -21398 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-50 chr8 14603738 14604040 + 1.08658567012551 NA intron (NM_172910, intron 4 of 15) intron (NM_172910, intron 4 of 15) -284647 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-10 chr13 95545543 95545835 + 1.08658567012551 NA Intergenic PB1D7|SINE|Alu -20449 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding unique_peak1_8_16_-1.18164163343115_3.49664202453477_1.08658567012551 chr6 99467612 99467804 + 1.08658567012551 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -32363 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-14 chr13 9190977 9191301 + 1.08658567012551 NA Intergenic Intergenic -85386 NM_001081426 208440 Mm.217326 NM_172459 ENSMUSG00000048264 Dip2c 2900024P20Rik|9630044M06|mKIAA0934 disco interacting protein 2 homolog C protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-12 chr15 55048533 55048807 + 1.08658567012551 NA exon (NM_001081288, exon 13 of 26) exon (NM_001081288, exon 13 of 26) 23482 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-22 chr15 74930262 74930602 + 1.08658567012551 NA Intergenic Intergenic -24619 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-44 chr6 86875222 86875604 + 1.08658567012551 NA intron (NM_001040106, intron 1 of 20) PB1D10|SINE|Alu 25896 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-4 chr16 92904446 92904653 + 1.08658567012551 NA Intergenic B3|SINE|B2 -78475 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-27 chr8 10997428 10997693 + 1.08658567012551 NA intron (NM_001081212, intron 1 of 1) intron (NM_001081212, intron 1 of 1) -10290 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-9 chr13 38451702 38451915 + 1.08658567012551 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 9985 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-15 chr17 87863370 87863603 + 1.08658567012551 NA Intergenic Intergenic -65492 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-27 chr17 62692648 62693061 + 1.08658567012551 NA intron (NM_010109, intron 1 of 3) LTR28B|LTR|ERV1 188463 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-3 chr1 128472653 128473030 + 1.08658567012551 NA Intergenic Intergenic -55425 NM_145507 226414 Mm.28693 NM_145507 ENSMUSG00000026356 Dars 5730439G15Rik aspartyl-tRNA synthetase protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-23 chr6 72548307 72548508 + 1.08658567012551 NA promoter-TSS (NM_001042534) promoter-TSS (NM_001042534) -866 NM_001042534 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-24 chr5 111164894 111165214 + 1.08658567012551 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) 160910 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-40 chr3 146650012 146650282 + 1.08658567012551 NA non-coding (NR_045949, exon 4 of 4) non-coding (NR_045949, exon 4 of 4) 1170 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-18 chr14 25458809 25459011 + 1.08658567012551 NA promoter-TSS (NM_001310666) promoter-TSS (NM_001310666) -275 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_8_16_-1.18164163343115_3.49664202453477_1.08658567012551 chr4 95759941 95760318 + 1.08658567012551 NA intron (NM_029347, intron 7 of 10) intron (NM_029347, intron 7 of 10) 180708 NM_029347 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-3 chr17 26597113 26597460 + 1.08658567012551 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 35774 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-8 chr12 119376627 119376866 + 1.08658567012551 NA Intergenic Intergenic -66664 NM_001163136 238455 Mm.31376 NM_001163136 ENSMUSG00000041886 Macc1 4732474O15Rik|Gm267 metastasis associated in colon cancer 1 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-20 chr2 72324706 72325074 + 1.08658567012551 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 39189 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-28 chr8 12800574 12800825 + 1.08658567012551 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 31220 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-17 chr18 82791463 82791750 + 1.08658567012551 NA Intergenic Intergenic -32567 NR_045389 76961 Mm.396392 NR_045389 ENSMUSG00000101773 2210420H20Rik - RIKEN cDNA 2210420H20 gene ncRNA common_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551 chr10 79538750 79539066 + 1.08658567012551 NA Intergenic Intergenic -5121 NM_001302389 50784 Mm.28873 NM_015817 ENSMUSG00000052151 Plpp2 Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c phospholipid phosphatase 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-37 chr2 136891609 136891908 + 1.08658567012551 NA promoter-TSS (NM_001141946) promoter-TSS (NM_001141946) 164 NM_001355670 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-39 chr3 9154121 9154397 + 1.08658567012551 NA Intergenic BC1_Mm|scRNA|scRNA 92295 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-7 chr12 118847944 118848198 + 1.08658567012551 NA intron (NM_177082, intron 2 of 2) intron (NM_177082, intron 2 of 2) 1742 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-52 chr8 80866680 80867003 + 1.08658567012551 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 13638 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-46 chr6 121043336 121043741 + 1.08658567012551 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -20926 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-2 chr12 59013086 59013291 + 1.08658567012551 NA promoter-TSS (NM_025656) promoter-TSS (NM_025656) -203 NM_025656 66603 Mm.35353 NM_025656 ENSMUSG00000060121 Gemin2 Sip1|gemin-2 gem nuclear organelle associated protein 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-34 chr2 25973445 25973712 + 1.08658567012551 NA intron (NM_001276360, intron 1 of 17) intron (NM_001276360, intron 1 of 17) 9704 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-9 chr13 45873543 45873790 + 1.08658567012551 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 91325 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-23 chr4 152026575 152026904 + 1.08658567012551 NA exon (NM_133879, exon 2 of 11) exon (NM_133879, exon 2 of 11) 932 NM_133879 100090 Mm.24661 NM_133879 ENSMUSG00000028952 Zbtb48 0610011D15Rik|AI327031|Hkr3|TZAP zinc finger and BTB domain containing 48 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-42 chr4 136434852 136435115 + 1.08658567012551 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 10371 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551 chr1 91436733 91436960 + 1.08658567012551 NA intron (NM_011066, intron 9 of 22) intron (NM_011066, intron 9 of 22) 22482 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-38 chr2 152684857 152685101 + 1.08658567012551 NA 3' UTR (NM_001159553, exon 3 of 3) 3' UTR (NM_001159553, exon 3 of 3) -2169 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-18 chr19 60934833 60935199 + 1.08658567012551 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 45267 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-24 chr17 13681230 13681487 + 1.08658567012551 NA Intergenic Intergenic -79183 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-25 chr17 27907825 27908061 + 1.08658567012551 NA 5' UTR (NM_026836, exon 2 of 6) 5' UTR (NM_026836, exon 2 of 6) 1299 NM_026836 68776 Mm.267998 NM_026836 ENSMUSG00000024218 Taf11 1110038O14Rik|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-8 chr6 112696880 112697128 + 1.08658567012551 NA promoter-TSS (NM_021385) promoter-TSS (NM_021385) -334 NM_001167730 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-31 chr19 37346894 37347137 + 1.08658567012551 NA Intergenic Intergenic -16402 NM_031156 15925 Mm.28366 NM_031156 ENSMUSG00000056999 Ide 1300012G03Rik|4833415K22Rik|AA675336|AI507533 insulin degrading enzyme protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-15 chr16 95825338 95825613 + 1.08658567012551 NA Intergenic Intergenic 73238 NR_040485 69776 Mm.120470 NR_040484 ENSMUSG00000086899 1600002D24Rik - RIKEN cDNA 1600002D24 gene ncRNA unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-30 chr9 63109513 63109779 + 1.08658567012551 NA Intergenic Intergenic 37334 NM_172446 207667 Mm.36349 NM_172446 ENSMUSG00000022245 Skor1 AV273001|C230094B15Rik|Corl1|Lbxcor1 SKI family transcriptional corepressor 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-29 chr18 61084392 61084723 + 1.08658567012551 NA 3' UTR (NM_001146268, exon 23 of 23) 3' UTR (NM_001146268, exon 23 of 23) -21015 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-16 chr13 42885063 42885316 + 1.08658567012551 NA intron (NM_001302636, intron 1 of 12) intron (NM_001302636, intron 1 of 12) 18942 NM_001302636 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-2 chr1 132153083 132153323 + 1.08658567012551 NA Intergenic Intergenic -13518 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-19 chr2 153122138 153122417 + 1.08658567012551 NA intron (NM_001172117, intron 1 of 12) intron (NM_001172117, intron 1 of 12) 13809 NM_010407 15162 Mm.715 NM_010407 ENSMUSG00000003283 Hck AI849071|Bmk hemopoietic cell kinase protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-33 chrX 145468288 145468572 + 1.08658567012551 NA intron (NM_001290274, intron 5 of 8) intron (NM_001290274, intron 5 of 8) 19209 NM_001290274 27494 Mm.100068 NM_153319 ENSMUSG00000041688 Amot CAG-2|D0Kist1|Sii6 angiomotin protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-26 chr8 8454444 8454698 + 1.08658567012551 NA Intergenic Intergenic 206202 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-45 chr6 108453327 108453579 + 1.08658567012551 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -36290 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-26 chr6 34603516 34603779 + 1.08658567012551 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 5143 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-5 chr11 43536491 43536777 + 1.08658567012551 NA intron (NM_001045530, intron 2 of 5) intron (NM_001045530, intron 2 of 5) 7885 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-25 chr5 134912292 134912887 + 1.08658567012551 NA Intergenic (TAAA)n|Simple_repeat|Simple_repeat 2941 NM_020504 57255 Mm.86652 NM_020504 ENSMUSG00000008843 Cldn13 2500004B14Rik claudin 13 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-26 chr17 29486418 29486819 + 1.08658567012551 NA Intergenic B1_Mus1|SINE|Alu -4427 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-10 chr10 84436780 84437018 + 1.08658567012551 NA intron (NM_001004363, intron 1 of 6) intron (NM_001004363, intron 1 of 6) 3572 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-17 chr13 48968938 48969214 + 1.08658567012551 NA non-coding (NR_015601, exon 2 of 2) non-coding (NR_015601, exon 2 of 2) 964 NR_015601 68128 Mm.426304 NR_015601 Fam120aos C030044B11Rik family with sequence similarity 120A, opposite strand ncRNA unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-48 chr7 90313380 90313719 + 1.08658567012551 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 11194 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551 chr12 73813591 73813945 + 1.08658567012551 NA Intergenic Intergenic -87556 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-21 chr2 145293413 145293663 + 1.08658567012551 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 50927 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-7 chr12 78980660 78980993 + 1.08658567012551 NA intron (NM_178745, intron 1 of 2) intron (NM_178745, intron 1 of 2) 2652 NM_001170401 268567 Mm.341747 NM_178745 ENSMUSG00000046157 Tmem229b 6330442E10Rik|9830138K24|AU019070 transmembrane protein 229B protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-36 chr2 118116553 118116845 + 1.08658567012551 NA intron (NM_001313914, intron 7 of 21) intron (NM_001313914, intron 7 of 21) 4823 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-7 chr1 186578887 186579141 + 1.08658567012551 NA Intergenic Intergenic -20333 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_18_7_0.976218434118392_3.4881092170592_1.08658567012551 chr5 113219283 113219494 + 1.08658567012551 NA Intergenic Intergenic -7521 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551 chr1 55132181 55132430 + 1.08658567012551 NA intron (NM_001310585, intron 1 of 6) intron (NM_001310585, intron 1 of 6) 1060 NM_025283 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding common_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-4 chr18 77939346 77939588 + 1.08658567012551 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 1000 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-2 chr16 34959522 34959732 + 1.08658567012551 NA promoter-TSS (NR_045723) promoter-TSS (NR_045723) -633 NR_045723 278725 Mm.436927 NR_045722 E130310I04Rik A930019C19Rik RIKEN cDNA E130310I04 gene ncRNA unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-54 chr9 108239778 108240039 + 1.08658567012551 NA intron (NM_001276485, intron 1 of 2) intron (NM_001276485, intron 1 of 2) 23907 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-29 chr8 36168607 36168960 + 1.08658567012551 NA Intergenic Intergenic 12773 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-18 chr19 28285538 28285753 + 1.08658567012551 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -274479 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-47 chr7 13036074 13036273 + 1.08658567012551 NA intron (NM_145578, intron 4 of 5) intron (NM_145578, intron 4 of 5) -1396 NM_001360731 68953 Mm.295670 NM_026885 ENSMUSG00000033916 Chmp2a 1500016L11Rik|mVps2 charged multivesicular body protein 2A protein-coding common_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-2 chr16 96089365 96089595 + 1.08658567012551 NA Intergenic Intergenic -7052 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-16 chr18 42767262 42767631 + 1.08658567012551 NA intron (NM_028392, intron 1 of 8) intron (NM_028392, intron 1 of 8) 132060 NR_073583 72930 Mm.26134 NM_027531 ENSMUSG00000024500 Ppp2r2b 2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-8 chr13 21750191 21750405 + 1.08658567012551 NA exon (NM_178211, exon 1 of 1) exon (NM_178211, exon 1 of 1) 255 NM_178211 319160 Mm.255646 NM_178211 ENSMUSG00000064288 Hist1h4k - histone cluster 1, H4k protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-16 chr17 25823822 25824089 + 1.08658567012551 NA 5' UTR (NM_173741, exon 1 of 9) 5' UTR (NM_173741, exon 1 of 9) 328 NM_173741 268933 Mm.95512 NM_173741 ENSMUSG00000025737 Wdr24 BC037651 WD repeat domain 24 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-53 chr8 90832894 90833203 + 1.08658567012551 NA intron (NM_177224, intron 1 of 39) intron (NM_177224, intron 1 of 39) 4213 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-32 chr9 98985917 98986125 + 1.08658567012551 NA promoter-TSS (NM_001122851) promoter-TSS (NM_001122851) -352 NM_011810 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-10 chr8 124291869 124292130 + 1.08658567012551 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 60605 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-4 chr11 82033704 82034080 + 1.08658567012551 NA Intergenic Intergenic -1685 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-6 chr2 104589850 104590151 + 1.08658567012551 NA promoter-TSS (NM_177253) promoter-TSS (NM_177253) -484 NM_177253 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-13 chr17 24472064 24472341 + 1.08658567012551 NA TTS (NM_025954) TTS (NM_025954) -1682 NM_175682 319259 Mm.258355 NM_175682 ENSMUSG00000045744 Bricd5 9930021D14Rik BRICHOS domain containing 5 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-20 chr15 10823246 10823593 + 1.08658567012551 NA Intergenic Intergenic -5632 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-33 chr19 56972964 56973378 + 1.08658567012551 NA intron (NM_146102, intron 1 of 20) PB1D10|SINE|Alu 35404 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-31 chr8 125717742 125718000 + 1.08658567012551 NA Intergenic Intergenic -16332 NM_025636 66566 Mm.25296 NM_025636 ENSMUSG00000031851 Ntpcr 2310079N02Rik|AI449709 nucleoside-triphosphatase, cancer-related protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-8 chr10 8768385 8768583 + 1.08658567012551 NA intron (NM_175155, intron 8 of 19) intron (NM_175155, intron 8 of 19) 117586 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-15 chr13 32508259 32508470 + 1.08658567012551 NA Intergenic Intergenic -169820 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-13 chr15 73686725 73687063 + 1.08658567012551 NA Intergenic Intergenic 20611 NM_173365 239530 Mm.122997 NM_173365 ENSMUSG00000045281 Gpr20 A430106B11Rik G protein-coupled receptor 20 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-28 chr7 44930038 44930309 + 1.08658567012551 NA promoter-TSS (NM_007458) promoter-TSS (NM_007458) -683 NM_001077264 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-23 chr16 57400714 57401073 + 1.08658567012551 NA intron (NM_001040397, intron 1 of 4) MER5A|DNA|hAT-Charlie 47616 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551 chr1 43091931 43092141 + 1.08658567012551 NA intron (NM_001013025, intron 2 of 12) intron (NM_001013025, intron 2 of 12) 450 NM_001357299 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-3 chr10 23457577 23457877 + 1.08658567012551 NA Intergenic Intergenic -107784 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak2_8_16_-1.18164163343115_3.49664202453477_1.08658567012551-14 chr17 64743374 64743628 + 1.08658567012551 NA intron (NM_008549, intron 20 of 21) intron (NM_008549, intron 20 of 21) -23610 NR_105051 101202683 Mm.393309 NR_105051 Dreh - down-regulated in hepatocellular carcinoma ncRNA common_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-3 chr15 67006450 67006685 + 1.08658567012551 NA Intergenic Intergenic -36926 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-11 chr10 96688695 96688912 + 1.08658567012551 NA Intergenic Intergenic 71802 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_18_7_0.976218434118392_3.4881092170592_1.08658567012551-43 chr5 139258385 139258595 + 1.08658567012551 NA intron (NM_001163316, intron 1 of 8) intron (NM_001163316, intron 1 of 8) 4993 NM_001163316 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding unique_peak2_7_16_-1.3503678174593_3.41227893252069_1.08658567012551-10 chr13 70600906 70601142 + 1.08658567012551 NA intron (NM_144837, intron 14 of 18) intron (NM_144837, intron 14 of 18) 27783 NR_045934 73584 Mm.442491 NR_045934 ENSMUSG00000101051 1700100L14Rik - RIKEN cDNA 1700100L14 gene ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-15 chr4 9135680 9135883 + 1.08602067057793 NA Intergenic Intergenic -133512 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-13 chr4 58170740 58170949 + 1.08602067057793 NA intron (NM_022814, intron 3 of 47) intron (NM_022814, intron 3 of 47) 35752 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-5 chr13 100775456 100775656 + 1.08602067057793 NA intron (NM_021886, intron 1 of 8) CpG 343 NM_021886 26886 Mm.273502 NM_021886 ENSMUSG00000045273 Cenph 1700021I11Rik|2410018A12Rik|2610042E16Rik|2810046K12Rik|AU044255|CENP-H|ENP centromere protein H protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-7 chr17 70856690 70856906 + 1.08602067057793 NA Intergenic B1F2|SINE|Alu -3266 NM_001164074 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-7 chr18 70578047 70578278 + 1.08602067057793 NA intron (NM_010773, intron 1 of 6) intron (NM_010773, intron 1 of 6) 9870 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-16 chr4 145267478 145267678 + 1.08602067057793 NA Intergenic B1F|SINE|Alu -20708 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-15 chr9 101226306 101226520 + 1.08602067057793 NA intron (NM_001161362, intron 1 of 13) intron (NM_001161362, intron 1 of 13) 25419 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-10 chr19 46535322 46535546 + 1.08602067057793 NA intron (NM_019718, intron 5 of 5) intron (NM_019718, intron 5 of 5) 33786 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-2 chr13 15639319 15639513 + 1.08602067057793 NA intron (NM_008130, intron 4 of 14) intron (NM_008130, intron 4 of 14) 163214 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-13 chr3 93595218 93595454 + 1.08602067057793 NA Intergenic Intergenic 40219 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-11 chr2 32418920 32419119 + 1.08602067057793 NA intron (NM_001164358, intron 6 of 10) intron (NM_001164358, intron 6 of 10) 5047 NM_001290558 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793 chr10 93748302 93748501 + 1.08602067057793 NA Intergenic ORR1F|LTR|ERVL-MaLR -65079 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793-2 chr13 104204641 104204843 + 1.08602067057793 NA TTS (NM_172807) TTS (NM_172807) -23869 NM_181061 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-18 chr7 110950802 110951022 + 1.08602067057793 NA intron (NM_194464, intron 1 of 20) intron (NM_194464, intron 1 of 20) -4725 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-14 chr8 11476133 11476346 + 1.08602067057793 NA intron (NM_011227, intron 1 of 1) B1_Mus2|SINE|Alu -1690 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-21 chr9 13456128 13456317 + 1.08602067057793 NA Intergenic Intergenic 24861 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-13 chr7 109969383 109969592 + 1.08602067057793 NA Intergenic Intergenic -9017 NM_001311139 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-9 chr2 29972542 29972757 + 1.08602067057793 NA intron (NM_001177668, intron 1 of 55) intron (NM_001177668, intron 1 of 55) 7089 NM_001309460 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-5 chr15 38732133 38732409 + 1.08602067057793 NA Intergenic Intergenic -3755 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-18 chr5 35723947 35724144 + 1.08602067057793 NA exon (NM_194344, exon 2 of 18) exon (NM_194344, exon 2 of 18) 5231 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793-3 chr14 101785735 101785922 + 1.08602067057793 NA intron (NM_201529, intron 1 of 30) intron (NM_201529, intron 1 of 30) -54795 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-19 chr8 18647763 18648064 + 1.08602067057793 NA intron (NM_173189, intron 9 of 13) MTEb|LTR|ERVL-MaLR 52782 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-4 chr13 43238307 43238546 + 1.08602067057793 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 65746 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-7 chr16 96901689 96901943 + 1.08602067057793 NA intron (NM_031174, intron 3 of 32) intron (NM_031174, intron 3 of 32) 268919 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding unique_peak2_1_5_-1.83375751778363_1.66808374182934_1.08602067057793-3 chr7 128305440 128305645 + 1.08602067057793 NA Intergenic Intergenic -7411 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-4 chr13 50813471 50813696 + 1.08602067057793 NA Intergenic Intergenic -48335 NR_045364 71654 Mm.427318 NR_045364 ENSMUSG00000113652 4930518P08Rik - RIKEN cDNA 4930518P08 gene ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-3 chr13 63421856 63422061 + 1.08602067057793 NA intron (NM_001347515, intron 1 of 15) MER68|LTR|ERVL 9787 NM_001347515 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793 chr12 104856553 104856744 + 1.08602067057793 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 8428 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793-4 chr15 77902883 77903142 + 1.08602067057793 NA Intergenic RSINE1|SINE|B4 25982 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-16 chr6 98902306 98902550 + 1.08602067057793 NA Intergenic Intergenic 125870 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_6_3_0.545809052938414_2.27290452646921_1.08602067057793 chr12 111599340 111599548 + 1.08602067057793 NA intron (NM_021516, intron 2 of 16) B2_Mm2|SINE|B2 24934 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-8 chr19 23033682 23033940 + 1.08602067057793 NA Intergenic Intergenic -107415 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding unique_peak2_1_5_-1.83375751778363_1.66808374182934_1.08602067057793-4 chr8 76592314 76592524 + 1.08602067057793 NA Intergenic Intergenic 308202 NR_028579 102640923 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 - predicted gene 10649 ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-17 chr5 34996839 34997071 + 1.08602067057793 NA intron (NM_173402, intron 3 of 16) intron (NM_173402, intron 3 of 16) -2123 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793-6 chr3 63439104 63439337 + 1.08602067057793 NA promoter-TSS (NR_153189) promoter-TSS (NR_153189) -31 NR_153189 102637430 Mm.209619 NR_153189 ENSMUSG00000104336 Gm34240 - predicted gene, 34240 ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-10 chr2 35247368 35247578 + 1.08602067057793 NA Intergenic Intergenic -8886 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793 chr1 33529656 33529882 + 1.08602067057793 NA intron (NM_008922, intron 8 of 13) intron (NM_008922, intron 8 of 13) 140025 NM_008922 19076 Mm.27705 NM_008922 ENSMUSG00000026134 Prim2 AI323589 DNA primase, p58 subunit protein-coding unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793 chr13 51018778 51018984 + 1.08602067057793 NA Intergenic B3A|SINE|B2 81846 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-11 chr4 137494018 137494221 + 1.08602067057793 NA intron (NM_008305, intron 1 of 96) B1F1|SINE|Alu 25316 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak2_1_5_-1.83375751778363_1.66808374182934_1.08602067057793-5 chr9 102677413 102677624 + 1.08602067057793 NA Intergenic ERVL-E-int|LTR|ERVL -40286 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-6 chr17 80756391 80756604 + 1.08602067057793 NA Intergenic L1Md_T|LINE|L1 -28472 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-2 chr10 122810217 122810457 + 1.08602067057793 NA intron (NM_001110218, intron 3 of 9) intron (NM_001110218, intron 3 of 9) 131022 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793-7 chr7 109710657 109710879 + 1.08602067057793 NA intron (NM_020616, intron 5 of 5) B1_Mus2|SINE|Alu 7031 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-20 chr6 127146369 127146604 + 1.08602067057793 NA intron (NM_009829, intron 2 of 4) intron (NM_009829, intron 2 of 4) -2903 NR_040274 77558 Mm.358918 NR_040273 ENSMUSG00000097166 9330179D12Rik - RIKEN cDNA 9330179D12 gene ncRNA unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-17 chr7 68217421 68217625 + 1.08602067057793 NA intron (NM_010513, intron 19 of 20) intron (NM_010513, intron 19 of 20) 46710 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-9 chr19 24870477 24870697 + 1.08602067057793 NA Intergenic Intergenic -8745 NM_175013 226041 Mm.105222 NM_175013 ENSMUSG00000041731 Pgm5 4833423B07|9530034F03Rik|D830025G17|aciculin phosphoglucomutase 5 protein-coding unique_peak1_5_2_0.740023104870583_1.95497405315645_1.08602067057793-5 chr18 44012828 44013032 + 1.08602067057793 NA exon (NM_001081180, exon 25 of 32) exon (NM_001081180, exon 25 of 32) -14939 NM_001039218 433178 Mm.120009 NM_001039218 ENSMUSG00000051050 Spink14 EG433178|Gm5505 serine peptidase inhibitor, Kazal type 14 protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-10 chr4 13500334 13500605 + 1.08602067057793 NA Intergenic Intergenic -242833 NM_001111026 12395 Mm.4909 NM_009822 ENSMUSG00000006586 Runx1t1 Cbfa2t1h|ETO|MTG8 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-6 chr14 7897386 7897589 + 1.08602067057793 NA intron (NM_001081427, intron 18 of 45) intron (NM_001081427, intron 18 of 45) 79530 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-8 chr17 84256945 84257163 + 1.08602067057793 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -69107 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-2 chr1 58444615 58444816 + 1.08602067057793 NA promoter-TSS (NM_022988) promoter-TSS (NM_022988) -436 NM_022988 65102 Mm.340248 NM_022988 ENSMUSG00000026036 Nif3l1 1110030G24Rik Ngg1 interacting factor 3-like 1 (S. pombe) protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-14 chr4 62703753 62703994 + 1.08602067057793 NA TTS (NM_001310706) TTS (NM_001310706) 29899 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-19 chr6 91074732 91075057 + 1.08602067057793 NA intron (NM_018815, intron 8 of 39) intron (NM_018815, intron 8 of 39) 41932 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak2_1_5_-1.83375751778363_1.66808374182934_1.08602067057793-2 chr7 29166501 29166730 + 1.08602067057793 NA exon (NM_182927, exon 3 of 6) exon (NM_182927, exon 3 of 6) 2032 NM_182927 101809 Mm.377262 NM_182927 ENSMUSG00000037239 Spred3 AW047143|D130060H24Rik|Spred-3 sprouty-related, EVH1 domain containing 3 protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-3 chr1 134217475 134217689 + 1.08602067057793 NA intron (NM_001291930, intron 1 of 1) intron (NM_001291930, intron 1 of 1) 17274 NM_001291928 11539 Mm.298908 NM_009629 ENSMUSG00000042429 Adora1 A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri adenosine A1 receptor protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-15 chr5 35943915 35944253 + 1.08602067057793 NA intron (NM_027373, intron 3 of 16) intron (NM_027373, intron 3 of 16) 50765 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-3 chr11 60876647 60876855 + 1.08602067057793 NA intron (NM_001168507, intron 1 of 2) intron (NM_001168507, intron 1 of 2) 2287 NM_173453 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-4 chr14 73890123 73890314 + 1.08602067057793 NA Intergenic Intergenic 337432 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-12 chr2 109728228 109728448 + 1.08602067057793 NA Intergenic Intergenic 5417 NM_001285422 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-9 chr2 34769807 34770063 + 1.08602067057793 NA Intergenic Intergenic -2155 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-5 chr15 62279330 62279542 + 1.08602067057793 NA Intergenic Intergenic -59985 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-14 chr3 143650367 143650565 + 1.08602067057793 NA Intergenic Intergenic 61677 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-12 chr5 105638768 105639027 + 1.08602067057793 NA Intergenic PB1D7|SINE|Alu -61072 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_3_6_-1.06320491869332_2.27575246271094_1.08602067057793-6 chr16 65999040 65999264 + 1.08602067057793 NA Intergenic Intergenic 183519 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding unique_peak2_1_5_-1.83375751778363_1.66808374182934_1.08602067057793 chr3 132800444 132800653 + 1.08602067057793 NA intron (NM_001163455, intron 23 of 25) intron (NM_001163455, intron 23 of 25) 78048 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-11 chr2 70507115 70507336 + 1.08602067057793 NA intron (NR_040496, intron 1 of 2) intron (NR_040496, intron 1 of 2) -1594 NM_025744 66748 Mm.423014 NM_025744 ENSMUSG00000075302 Erich2 4933404M02Rik glutamate rich 2 protein-coding unique_peak2_2_6_-1.47531433689262_2.06969775361129_1.08602067057793-8 chr17 49473087 49473296 + 1.08602067057793 NA intron (NM_001008231, intron 17 of 25) ID4_|SINE|ID 44827 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding unique_peak1_6_3_0.545809052938414_2.27290452646921_1.08602067057793-12 chr3 4672065 4672254 + 1.08602067057793 NA Intergenic HAL1b|LINE|L1 -126549 NR_045272 100503859 Mm.75172 NR_045272 ENSMUSG00000098659 1110015O18Rik - RIKEN cDNA 1110015O18 gene ncRNA common_peak2_111_68_0.409064677867267_6.3130567957118_1.08571825676824 chr6 145865603 145866699 + 1.08571825676824 NA promoter-TSS (NM_024469) promoter-TSS (NM_024469) -731 NM_001271768 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak2_74_85_-0.483130290322335_6.18469960954093_1.085684584894 chr17 31511594 31512692 + 1.085684584894 NA intron (NM_021322, intron 1 of 10) CpG 344 NM_021322 57773 Mm.143771 NM_021322 ENSMUSG00000024037 Wdr4 AI415180|AI448349|D530049K22Rik|Wh WD repeat domain 4 protein-coding common_peak2_75_85_-0.464156279730195_6.194186614837_1.085684584894 chr5 66543111 66544308 + 1.085684584894 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 75108 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak1_75_85_-0.464156279730195_6.194186614837_1.085684584894 chr4 86674447 86675127 + 1.085684584894 NA Intergenic Intergenic -4728 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak2_103_62_0.434148291808707_6.19435406940427_1.08568458489398-2 chr18 36287085 36287953 + 1.08568458489398 NA exon (NM_008989, exon 2 of 2) exon (NM_008989, exon 2 of 2) 6357 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak2_103_62_0.434148291808707_6.19435406940427_1.08568458489398 chr15 38661903 38662856 + 1.08568458489398 NA intron (NM_025494, intron 1 of 12) intron (NM_025494, intron 1 of 12) 475 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding common_peak1_193_126_0.315870888065668_7.146620130805_1.08564861448757 chr13 97241235 97243315 + 1.08564861448757 NA intron (NM_007930, intron 1 of 2) intron (NM_007930, intron 1 of 2) 1170 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak2_182_118_0.326118928649143_7.05787722763252_1.084362909157 chr12 70825507 70826743 + 1.084362909157 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 611 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak2_28_39_-0.739960093936852_4.95194804791894_1.08405458203116 chr3 37962620 37963281 + 1.08405458203116 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 64137 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_28_39_-0.739960093936852_4.95194804791894_1.08405458203116-2 chr4 80910953 80911562 + 1.08405458203116 NA 5' UTR (NM_026821, exon 1 of 2) 5' UTR (NM_026821, exon 1 of 2) 571 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding common_peak2_28_39_-0.739960093936852_4.95194804791894_1.08405458203116 chr2 90548765 90549611 + 1.08405458203116 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 31459 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_28_39_-0.739960093936852_4.95194804791894_1.08405458203116-3 chr7 25248819 25249313 + 1.08405458203116 NA intron (NM_010155, intron 1 of 3) CpG 1692 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak2_46_24_0.62980511352733_4.95875874653839_1.08405458203115-2 chr4 138304856 138305251 + 1.08405458203115 NA intron (NM_007838, intron 1 of 10) CpG 315 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-8 chr5 5687385 5687786 + 1.08405458203115 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 6504 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-5 chr14 20229241 20230028 + 1.08405458203115 NA Intergenic Intergenic 39528 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115 chr10 79841124 79841621 + 1.08405458203115 NA intron (NR_038088, intron 3 of 4) intron (NR_038088, intron 3 of 4) -13060 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-3 chr13 16014871 16015404 + 1.08405458203115 NA intron (NM_008380, intron 3 of 4) intron (NM_008380, intron 3 of 4) 3286 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-9 chr6 31062312 31063030 + 1.08405458203115 NA promoter-TSS (NR_029744) promoter-TSS (NR_029744) 76 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-6 chr14 52257166 52257668 + 1.08405458203115 NA Intergenic CpG -19845 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak2_46_24_0.62980511352733_4.95875874653839_1.08405458203115 chr10 60828655 60829141 + 1.08405458203115 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 2683 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-10 chr8 18699986 18700476 + 1.08405458203115 NA intron (NM_007426, intron 5 of 8) intron (NM_007426, intron 5 of 8) 41331 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-11 chr8 128451599 128451997 + 1.08405458203115 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 92557 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-4 chr13 114818311 114818787 + 1.08405458203115 NA intron (NM_001113375, intron 1 of 5) intron (NM_001113375, intron 1 of 5) 312 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding unique_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115 chr15 97824038 97824624 + 1.08405458203115 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 7436 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_46_24_0.62980511352733_4.95875874653839_1.08405458203115-3 chr7 45619865 45620425 + 1.08405458203115 NA 3' UTR (NM_008051, exon 2 of 2) 3' UTR (NM_008051, exon 2 of 2) -1666 NM_001018013 73456 Mm.380445 NM_001018013 ENSMUSG00000064158 Izumo1 1700058F15Rik|Izumo izumo sperm-egg fusion 1 protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-7 chr2 60877387 60877937 + 1.08405458203115 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 3776 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_46_24_0.62980511352733_4.95875874653839_1.08405458203115-2 chr11 96823091 96823733 + 1.08405458203115 NA intron (NM_008686, intron 2 of 4) intron (NM_008686, intron 2 of 4) 519 NM_001361682 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak2_61_72_-0.519375019327236_5.9301370492164_1.08340947933384 chr8 84249252 84249794 + 1.08340947933384 NA exon (NM_001007571, exon 2 of 3) exon (NM_001007571, exon 2 of 3) 238 NM_001007571 101966 Mm.200723 NM_001007571 ENSMUSG00000019362 D8Ertd738e AA589584 DNA segment, Chr 8, ERATO Doi 738, expressed protein-coding common_peak1_61_72_-0.519375019327236_5.9301370492164_1.08340947933384 chr11 59163473 59163962 + 1.08340947933384 NA promoter-TSS (NM_001270791) promoter-TSS (NM_001270791) 28 NM_001270791 216792 Mm.266175 NM_173785 ENSMUSG00000049287 Iba57 4930543L23Rik|A230051G13Rik|C1orf69 IBA57 homolog, iron-sulfur cluster assembly protein-coding common_peak2_210_209_-0.289358563507486_7.56956623591238_1.08250927653846 chr12 69371252 69373459 + 1.08250927653846 NA 5' UTR (NM_007481, exon 2 of 2) 5' UTR (NM_007481, exon 2 of 2) 205 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_270_182_0.267689769185935_7.64954472287701_1.08219730679643 chr12 76530380 76533264 + 1.08219730679643 NA Intergenic Intergenic 1390 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_175_178_-0.318750333813684_7.32444061035741_1.08205718610743 chr4 45528662 45530689 + 1.08205718610743 NA exon (NM_001033306, exon 1 of 6) exon (NM_001033306, exon 1 of 6) 1153 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_72_41_0.512098012787166_5.64836642917234_1.08181395420695-3 chr5 35686357 35687184 + 1.08181395420695 NA Intergenic Intergenic -6990 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak2_49_60_-0.568438475410578_5.6465180998576_1.08181395420695-2 chr2 27305221 27306029 + 1.08181395420695 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -58322 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_72_41_0.512098012787166_5.64836642917234_1.08181395420695 chr19 57007868 57008492 + 1.08181395420695 NA 5' UTR (NM_001177797, exon 1 of 19) 5' UTR (NM_001177797, exon 1 of 19) 395 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_72_41_0.512098012787166_5.64836642917234_1.08181395420695-4 chr6 88972072 88972700 + 1.08181395420695 NA Intergenic Intergenic 70135 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_49_60_-0.568438475410578_5.6465180998576_1.08181395420695 chr13 32555393 32556333 + 1.08181395420695 NA Intergenic Intergenic -217319 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_49_60_-0.568438475410578_5.6465180998576_1.08181395420695 chr6 145934216 145934787 + 1.08181395420695 NA intron (NM_010656, intron 1 of 2) intron (NM_010656, intron 1 of 2) 379 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_72_41_0.512098012787166_5.64836642917234_1.08181395420695-2 chr15 8098715 8099151 + 1.08181395420695 NA intron (NM_001358788, intron 2 of 3) CpG 276 NM_001358788 545085 Mm.321312 NM_001081402 ENSMUSG00000039828 Wdr70 4833422F06Rik WD repeat domain 70 protein-coding common_peak1_72_41_0.512098012787166_5.64836642917234_1.08181395420695 chr10 81136554 81137184 + 1.08181395420695 NA intron (NM_010731, intron 1 of 2) CpG 598 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_38_49_-0.637482413092155_5.32511498322865_1.08158034290998-2 chr9 41516368 41517214 + 1.08158034290998 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) -14634 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA common_peak2_38_49_-0.637482413092155_5.32511498322865_1.08158034290998 chr5 43555444 43556558 + 1.08158034290998 NA intron (NM_001135172, intron 1 of 2) intron (NM_001135172, intron 1 of 2) 40432 NM_001135172 109323 Mm.275553 NM_175425 ENSMUSG00000061535 C1qtnf7 5530401N20Rik|8430425G24Rik|Ctrp7 C1q and tumor necrosis factor related protein 7 protein-coding common_peak1_38_49_-0.637482413092155_5.32511498322865_1.08158034290998 chr10 80398704 80399320 + 1.08158034290998 NA intron (NM_001306143, intron 1 of 6) CpG 519 NM_013595 17192 Mm.7142 NM_013595 ENSMUSG00000035478 Mbd3 AI181826|AU019209 methyl-CpG binding domain protein 3 protein-coding common_peak2_59_32_0.579083446267432_5.33393584249217_1.08158034290997 chr14 25533504 25533851 + 1.08158034290997 NA promoter-TSS (NR_037236) promoter-TSS (NR_037236) -762 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_59_32_0.579083446267432_5.33393584249217_1.08158034290997-2 chr10 80955687 80956248 + 1.08158034290997 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 25876 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_59_32_0.579083446267432_5.33393584249217_1.08158034290997-2 chr7 30280634 30281215 + 1.08158034290997 NA promoter-TSS (NM_146186) promoter-TSS (NM_146186) -503 NM_146186 233064 Mm.271677 NM_146186 ENSMUSG00000037020 Wdr62 2310038K02Rik|b2b1508Clo WD repeat domain 62 protein-coding common_peak1_59_32_0.579083446267432_5.33393584249217_1.08158034290997-4 chr16 57683660 57684553 + 1.08158034290997 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 70631 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak1_59_32_0.579083446267432_5.33393584249217_1.08158034290997 chr1 184062097 184062825 + 1.08158034290997 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 28080 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_59_32_0.579083446267432_5.33393584249217_1.08158034290997-3 chr16 33877459 33878091 + 1.08158034290997 NA intron (NM_001145884, intron 4 of 14) B1_Mur4|SINE|Alu 48110 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_289_279_-0.24882305596031_8.00487148896481_1.08156022067969 chr12 27338625 27342664 + 1.08156022067969 NA 3' UTR (NM_009234, exon 1 of 1) 3' UTR (NM_009234, exon 1 of 1) 2074 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_289_279_-0.24882305596031_8.00487148896481_1.08156022067969-2 chr16 37787346 37790083 + 1.08156022067969 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 11659 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding unique_peak1_79_46_0.480998132147548_5.79508791775141_1.0807309740853-2 chr5 65454109 65454864 + 1.0807309740853 NA intron (NM_133697, intron 3 of 4) ID4_|SINE|ID -18644 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak1_80_46_0.498793601449976_5.80398565240263_1.0807309740853 chr11 75563349 75564537 + 1.0807309740853 NA intron (NM_001199284, intron 9 of 13) intron (NM_001199284, intron 9 of 13) 12514 NR_039553 100628624 NR_039553 ENSMUSG00000093100 Mir3971 mmu-mir-3971|mu-mir-3971 microRNA 3971 ncRNA common_peak1_79_46_0.480998132147548_5.79508791775141_1.0807309740853-2 chr4 123571286 123572159 + 1.0807309740853 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -44698 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_79_46_0.480998132147548_5.79508791775141_1.0807309740853-2 chr4 63530886 63531543 + 1.0807309740853 NA Intergenic Intergenic -13551 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_80_46_0.498793601449976_5.80398565240263_1.0807309740853-2 chr3 36066203 36066996 + 1.0807309740853 NA intron (NM_172678, intron 1 of 17) intron (NM_172678, intron 1 of 17) 620 NM_172678 229211 Mm.260997 NM_172678 ENSMUSG00000027710 Acad9 2600017P15Rik|4732402K02|C630012L17Rik|NPD002 acyl-Coenzyme A dehydrogenase family, member 9 protein-coding common_peak2_79_46_0.480998132147548_5.79508791775141_1.0807309740853 chr12 118813818 118814628 + 1.0807309740853 NA Intergenic RMER12C|LTR|ERVK -32106 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding common_peak1_55_66_-0.541445076239092_5.79536665233823_1.0807309740853 chr18 10029437 10030068 + 1.0807309740853 NA promoter-TSS (NM_001360884) promoter-TSS (NM_001360884) 61 NM_001360884 59025 Mm.329277 NM_021522 ENSMUSG00000047879 Usp14 2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375 ubiquitin specific peptidase 14 protein-coding common_peak2_55_66_-0.541445076239092_5.79536665233823_1.0807309740853 chr5 64861735 64862673 + 1.0807309740853 NA Intergenic Intergenic 58681 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_79_46_0.480998132147548_5.79508791775141_1.0807309740853-3 chr6 120145848 120146673 + 1.0807309740853 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -47563 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_80_46_0.498793601449976_5.80398565240263_1.0807309740853-4 chr8 69209186 69209962 + 1.0807309740853 NA intron (NM_001013379, intron 1 of 3) intron (NM_001013379, intron 1 of 3) 528 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding unique_peak1_79_46_0.480998132147548_5.79508791775141_1.0807309740853 chr10 83151289 83152325 + 1.0807309740853 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 166310 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_79_46_0.480998132147548_5.79508791775141_1.0807309740853 chr18 31804088 31804771 + 1.0807309740853 NA intron (NM_028866, intron 1 of 21) CpG 372 NM_001170966 74320 Mm.277705 NM_028866 ENSMUSG00000024400 Wdr33 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146 WD repeat domain 33 protein-coding common_peak1_80_46_0.498793601449976_5.80398565240263_1.0807309740853-3 chr4 127243842 127244728 + 1.0807309740853 NA intron (NM_030252, intron 1 of 1) intron (NM_030252, intron 1 of 1) 501 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding common_peak1_155_159_-0.329664277351283_7.15709595621172_1.08013860901466 chr6 42348333 42349540 + 1.08013860901466 NA promoter-TSS (NM_011777) promoter-TSS (NM_011777) -892 NM_001289619 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak1_194_127_0.311920716289959_7.15596035814498_1.08013860901466 chr15 38077085 38078842 + 1.08013860901466 NA intron (NM_001112721, intron 1 of 58) CpG 891 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding common_peak1_125_132_-0.368967116827599_6.87079887708739_1.08012440664646 chr2 117744144 117745780 + 1.08012440664646 NA Intergenic Intergenic 67840 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_53_28_0.614565855772588_5.16526392301387_1.07959258339368-3 chr7 141193277 141193930 + 1.07959258339368 NA promoter-TSS (NM_001172064) promoter-TSS (NM_001172064) 401 NM_001130444 15461 Mm.334313 NM_008284 ENSMUSG00000025499 Hras H-ras|Ha-ras|Harvey-ras|Hras-1|Hras1|Kras2|c-H-ras|c-Ha-ras|c-rasHa|ras Harvey rat sarcoma virus oncogene protein-coding common_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368-3 chr17 27820915 27821818 + 1.07959258339368 NA promoter-TSS (NM_001271511) promoter-TSS (NM_001271511) -824 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding unique_peak2_33_44_-0.682022238993223_5.15084197683306_1.07959258339368 chr10 59430218 59431015 + 1.07959258339368 NA intron (NM_010959, intron 5 of 8) PB1D7|SINE|Alu 11163 NM_010959 18302 Mm.123013 NM_010959 ENSMUSG00000009654 Oit3 EF-9|LZP oncoprotein induced transcript 3 protein-coding unique_peak1_53_28_0.614565855772588_5.16526392301387_1.07959258339368 chr3 104295365 104295893 + 1.07959258339368 NA Intergenic Intergenic -75223 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak1_53_28_0.614565855772588_5.16526392301387_1.07959258339368 chr17 75168104 75168684 + 1.07959258339368 NA intron (NM_019919, intron 4 of 33) intron (NM_019919, intron 4 of 33) -10387 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368 chr11 48820773 48821402 + 1.07959258339368 NA Intergenic ID4_|SINE|ID -3696 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_53_28_0.614565855772588_5.16526392301387_1.07959258339368 chr2 113374987 113375487 + 1.07959258339368 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 47501 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_33_44_-0.682022238993223_5.15084197683306_1.07959258339368-3 chr17 21473555 21474306 + 1.07959258339368 NA Intergenic MMERGLN-int|LTR|ERV1 -15058 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak2_52_28_0.587789060142288_5.15187552519872_1.07959258339368 chr13 36531504 36531915 + 1.07959258339368 NA intron (NM_001039189, intron 5 of 5) MIRc|SINE|MIR 202768 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368 chr14 52315638 52316177 + 1.07959258339368 NA intron (NM_015772, intron 1 of 1) intron (NM_015772, intron 1 of 1) 416 NM_001244916 50524 Mm.39487 NM_015772 ENSMUSG00000049532 Sall2 AI225809|AW559097|Msal-2|Sal-2|mKIAA0360|p150(Sal2) spalt like transcription factor 2 protein-coding common_peak2_33_44_-0.682022238993223_5.15084197683306_1.07959258339368 chr1 136718192 136718628 + 1.07959258339368 NA intron (NR_037986, intron 2 of 4) intron (NR_037986, intron 2 of 4) 22199 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA unique_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368-4 chr8 49281328 49282442 + 1.07959258339368 NA Intergenic Intergenic -607195 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding unique_peak1_53_28_0.614565855772588_5.16526392301387_1.07959258339368-2 chr3 145614436 145615001 + 1.07959258339368 NA Intergenic Intergenic 35267 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368-5 chr8 70773490 70774073 + 1.07959258339368 NA intron (NM_008841, intron 2 of 15) intron (NM_008841, intron 2 of 15) 2931 NM_008841 18709 Mm.12945 NM_008841 ENSMUSG00000031834 Pik3r2 p85beta phosphoinositide-3-kinase regulatory subunit 2 protein-coding unique_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368-2 chr5 115851415 115852455 + 1.07959258339368 NA intron (NM_007708, intron 2 of 46) intron (NM_007708, intron 2 of 46) 6279 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding common_peak1_53_28_0.614565855772588_5.16526392301387_1.07959258339368-4 chr8 11779386 11780012 + 1.07959258339368 NA intron (NM_017402, intron 1 of 19) intron (NM_017402, intron 1 of 19) 21369 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak2_53_28_0.614565855772588_5.16526392301387_1.07959258339368-2 chr4 48540584 48541041 + 1.07959258339368 NA intron (NM_028137, intron 1 of 2) intron (NM_028137, intron 1 of 2) 313 NM_028137 66665 Mm.140749 NM_028137 ENSMUSG00000039693 Msantd3 2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3 Myb/SANT-like DNA-binding domain containing 3 protein-coding unique_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368-3 chr7 27674006 27674645 + 1.07959258339368 NA promoter-TSS (NM_198417) promoter-TSS (NM_198417) 256 NM_001290528 269881 Mm.389883 NM_001081292 ENSMUSG00000040390 Map3k10 BC028668|BC046514|MST|Mlk2 mitogen-activated protein kinase kinase kinase 10 protein-coding common_peak2_33_44_-0.682022238993223_5.15084197683306_1.07959258339368-2 chr10 19907368 19907734 + 1.07959258339368 NA exon (NM_008822, exon 1 of 10) exon (NM_008822, exon 1 of 10) 123 NM_008822 18634 Mm.338363 NM_008822 ENSMUSG00000020003 Pex7 MmPEX7 peroxisomal biogenesis factor 7 protein-coding common_peak2_33_44_-0.682022238993223_5.15084197683306_1.07959258339368-4 chr3 137288076 137288524 + 1.07959258339368 NA Intergenic B1_Mur1|SINE|Alu -52778 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak1_33_44_-0.682022238993223_5.15084197683306_1.07959258339368 chr8 11391216 11391611 + 1.07959258339368 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -78587 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_52_28_0.587789060142288_5.15187552519872_1.07959258339368-2 chr14 57290908 57291431 + 1.07959258339368 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 107314 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak1_53_28_0.614565855772588_5.16526392301387_1.07959258339368-2 chr6 117907837 117908278 + 1.07959258339368 NA intron (NM_001166428, intron 1 of 3) CpG 253 NM_001166429 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak2_52_28_0.587789060142288_5.15187552519872_1.07959258339368-2 chr9 110624677 110624929 + 1.07959258339368 NA promoter-TSS (NM_026012) promoter-TSS (NM_026012) -410 NM_026012 67169 Mm.46680 NM_026012 ENSMUSG00000032491 Nradd 2610311B09Rik|BB104149|NRDD|NRH2|PLAIDD neurotrophin receptor associated death domain protein-coding common_peak1_121_75_0.392173576286047_6.44401430158661_1.07921547113662 chr18 34220933 34222009 + 1.07921547113662 NA intron (NM_007462, intron 1 of 15) CpG 301 NR_040534 633395 Mm.414290 NR_040534 ENSMUSG00000073607 Gm10548 - ribosomal protein L29 pseudogene pseudo common_peak2_91_100_-0.422413160528784_6.4470049024874_1.07921547113662 chr8 95011454 95012449 + 1.07921547113662 NA intron (NM_018882, intron 13 of 13) intron (NM_018882, intron 13 of 13) -5741 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak2_121_75_0.392173576286047_6.44401430158661_1.07921547113662 chr7 98701966 98702726 + 1.07921547113662 NA promoter-TSS (NM_028410) promoter-TSS (NM_028410) 582 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak1_121_75_0.392173576286047_6.44401430158661_1.07921547113662-2 chrX 12761251 12763083 + 1.07921547113662 NA promoter-TSS (NM_012005) promoter-TSS (NM_012005) -111 NR_045852 552913 Mm.216846 NR_045852 ENSMUSG00000085891 Gm14634 - predicted gene 14634 ncRNA common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-3 chr12 53146169 53146376 + 1.078512453669 NA intron (NM_198111, intron 13 of 13) intron (NM_198111, intron 13 of 13) -102405 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-9 chr16 30973563 30973890 + 1.078512453669 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 107706 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-17 chr2 60719722 60720033 + 1.078512453669 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 2726 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-9 chr13 5805041 5805254 + 1.078512453669 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 52945 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669 chr1 85795243 85795485 + 1.078512453669 NA 5' UTR (NM_001355047, exon 2 of 10) 5' UTR (NM_001355047, exon 2 of 10) 1347 NM_001355047 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-8 chr7 141465881 141466086 + 1.078512453669 NA intron (NM_001025103, intron 9 of 9) intron (NM_001025103, intron 9 of 9) -1379 NM_009842 12476 Mm.30246 NM_009842 ENSMUSG00000025510 Cd151 PETA-3|SFA-1|Tspan24 CD151 antigen protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-7 chr16 26581830 26582042 + 1.078512453669 NA intron (NR_152416, intron 1 of 12) intron (NR_152416, intron 1 of 12) 231 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-2 chr1 72606576 72606800 + 1.078512453669 NA intron (NM_018817, intron 9 of 16) intron (NM_018817, intron 9 of 16) 23437 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-11 chr14 62813224 62813451 + 1.078512453669 NA intron (NR_045503, intron 3 of 6) intron (NR_045503, intron 3 of 6) -24353 NM_175546 268752 Mm.1960 NM_175546 ENSMUSG00000014547 Wdfy2 5830485M08|B130024L21Rik|ProF|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-3 chr10 115386385 115386575 + 1.078512453669 NA intron (NM_001033261, intron 1 of 34) intron (NM_001033261, intron 1 of 34) 1521 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669 chr1 9639356 9639554 + 1.078512453669 NA Intergenic Intergenic -8363 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-22 chr7 25756773 25757037 + 1.078512453669 NA 3' UTR (NM_001190974, exon 19 of 19) 3' UTR (NM_001190974, exon 19 of 19) -2146 NM_178089 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-15 chr3 103789558 103789892 + 1.078512453669 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 1550 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-12 chr19 6295406 6295618 + 1.078512453669 NA intron (NM_010119, intron 3 of 4) intron (NM_010119, intron 3 of 4) -10945 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-5 chr14 76731231 76731544 + 1.078512453669 NA Intergenic Intergenic -28744 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-10 chr6 31517930 31518143 + 1.078512453669 NA Intergenic Intergenic 45901 NM_013723 27205 Mm.89918 NM_013723 ENSMUSG00000025608 Podxl AW121214|Ly102|PC|PCLP-1|Pclp1|Podxl1 podocalyxin-like protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-8 chr14 61448581 61448824 + 1.078512453669 NA Intergenic Intergenic -8755 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding common_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-4 chr5 93263199 93263432 + 1.078512453669 NA Intergenic Intergenic -4258 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-4 chr1 158732745 158732944 + 1.078512453669 NA intron (NM_001085376, intron 20 of 21) intron (NM_001085376, intron 20 of 21) 224594 NM_001085376 23850 Mm.458621 NM_001085376 ENSMUSG00000073530 Pappa2 PAPP-A2|PLAC3|Pappe pappalysin 2 protein-coding common_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-3 chr3 98059288 98059513 + 1.078512453669 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 45862 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-12 chr15 52155569 52155801 + 1.078512453669 NA Intergenic Intergenic 115578 NM_175503 239435 Mm.24204 NM_175503 ENSMUSG00000068522 Aard A5D3|AV328152 alanine and arginine rich domain containing protein protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-29 chr9 75107521 75107779 + 1.078512453669 NA intron (NM_010864, intron 1 of 40) intron (NM_010864, intron 1 of 40) 36444 NM_010864 17918 Mm.3645 NM_010864 ENSMUSG00000034593 Myo5a 9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr myosin VA protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-27 chr9 71791181 71791435 + 1.078512453669 NA Intergenic Intergenic -19706 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-20 chr2 164427465 164427717 + 1.078512453669 NA intron (NM_011521, intron 4 of 4) intron (NM_011521, intron 4 of 4) 15597 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-3 chr10 17347056 17347260 + 1.078512453669 NA Intergenic Intergenic -251376 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-7 chr12 53298673 53298966 + 1.078512453669 NA intron (NM_013780, intron 1 of 11) intron (NM_013780, intron 1 of 11) 50142 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-12 chr2 117649985 117650190 + 1.078512453669 NA Intergenic Intergenic 162715 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-17 chr4 89510155 89510408 + 1.078512453669 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -177917 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-23 chr5 73492722 73492916 + 1.078512453669 NA intron (NM_178896, intron 1 of 10) intron (NM_178896, intron 1 of 10) 1793 NM_178896 100737 Mm.220312 NM_178896 ENSMUSG00000051674 Dcun1d4 AI836376 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-6 chr5 113110816 113111020 + 1.078512453669 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 27667 NM_001347397 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-28 chrX 20761636 20761864 + 1.078512453669 NA Intergenic Intergenic 57841 NM_145628 236733 Mm.34489 NM_145628 ENSMUSG00000031066 Usp11 6230415D12Rik|mKIAA4085 ubiquitin specific peptidase 11 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-16 chr8 18616896 18617162 + 1.078512453669 NA intron (NM_173189, intron 3 of 13) intron (NM_173189, intron 3 of 13) 21898 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding common_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669 chr10 31557716 31557968 + 1.078512453669 NA intron (NM_001146349, intron 1 of 5) intron (NM_001146349, intron 1 of 5) 51883 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-7 chr13 62129978 62130294 + 1.078512453669 NA intron (NM_001039239, intron 1 of 3) RLTR22_Mur|LTR|ERVK 246 NM_001039239 630579 Mm.440905 NM_001039239 ENSMUSG00000074867 Zfp808 EG630579|Gm7036 zinc finger protein 808 protein-coding common_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-3 chr4 136524804 136525013 + 1.078512453669 NA intron (NM_024452, intron 2 of 4) intron (NM_024452, intron 2 of 4) 55147 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-15 chr18 36407348 36407551 + 1.078512453669 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 47046 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-30 chr9 98314670 98314878 + 1.078512453669 NA intron (NM_001357445, intron 1 of 3) intron (NM_001357445, intron 1 of 3) 18204 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-28 chr8 124195169 124195389 + 1.078512453669 NA Intergenic Intergenic -36115 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-6 chr11 95044738 95044947 + 1.078512453669 NA 3' UTR (NM_001306162, exon 26 of 26) 3' UTR (NM_001306162, exon 26 of 26) -3471 NM_133667 18604 Mm.29768 NM_133667 ENSMUSG00000038967 Pdk2 - pyruvate dehydrogenase kinase, isoenzyme 2 protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-9 chr9 67611925 67612134 + 1.078512453669 NA Intergenic Intergenic -52326 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-20 chr5 140790528 140790770 + 1.078512453669 NA intron (NM_010302, intron 1 of 3) intron (NM_010302, intron 1 of 3) 39782 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-9 chr18 6515646 6515915 + 1.078512453669 NA intron (NM_007935, intron 1 of 13) intron (NM_007935, intron 1 of 13) 328 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-18 chr2 103662768 103663004 + 1.078512453669 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 96576 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-4 chr11 86961535 86961755 + 1.078512453669 NA intron (NM_001005341, intron 2 of 4) MER58A|DNA|hAT-Charlie 32117 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-15 chr4 139216884 139217079 + 1.078512453669 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 22870 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-4 chr7 122020429 122020665 + 1.078512453669 NA intron (NM_028758, intron 1 of 16) intron (NM_028758, intron 1 of 16) 651 NM_028758 74105 Mm.29619 NM_028758 ENSMUSG00000030872 Gga2 1200007E24Rik|mKIAA1080 golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-7 chr17 72956804 72957036 + 1.078512453669 NA Intergenic Intergenic 38615 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-16 chr19 16284953 16285252 + 1.078512453669 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 29902 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-7 chr7 37662291 37662558 + 1.078512453669 NA intron (NM_172385, intron 2 of 5) intron (NM_172385, intron 2 of 5) 107328 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-25 chr8 18936431 18936673 + 1.078512453669 NA intron (NM_176951, intron 6 of 6) intron (NM_176951, intron 6 of 6) 14319 NM_001286469 319581 Mm.111354 NM_176951 ENSMUSG00000039814 Xkr5 5430438H03Rik|XRG5 X-linked Kx blood group related 5 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-14 chr4 53409913 53410103 + 1.078512453669 NA Intergenic Intergenic -30405 NM_001159633 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-19 chr2 163354731 163354929 + 1.078512453669 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 43143 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-6 chr13 34711018 34711284 + 1.078512453669 NA Intergenic Intergenic -28491 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-6 chr9 40748598 40748840 + 1.078512453669 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) -52554 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-16 chr3 104294460 104294854 + 1.078512453669 NA Intergenic Intergenic -74251 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-22 chr5 23581368 23581560 + 1.078512453669 NA intron (NR_152854, intron 2 of 14) intron (NR_152854, intron 2 of 14) 35107 NM_001359175 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669 chr1 158606768 158607008 + 1.078512453669 NA intron (NM_007495, intron 14 of 22) RLTR17|LTR|ERVK 101263 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-13 chr19 37178090 37178379 + 1.078512453669 NA intron (NR_045329, intron 2 of 2) intron (NR_045329, intron 2 of 2) -2171 NM_001290826 208922 Mm.391176 NM_198300 ENSMUSG00000039652 Cpeb3 4831444O18Rik|CPE-BP3|mKIAA0940 cytoplasmic polyadenylation element binding protein 3 protein-coding unique_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-2 chr19 21824253 21824472 + 1.078512453669 NA intron (NM_001033759, intron 13 of 23) intron (NM_001033759, intron 13 of 23) 46022 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-3 chr17 87842144 87842358 + 1.078512453669 NA Intergenic Intergenic -44257 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-19 chr5 93126765 93127019 + 1.078512453669 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 33476 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-6 chr17 14171982 14172187 + 1.078512453669 NA Intergenic Intergenic 31747 NM_172826 240025 Mm.79993 NM_172826 ENSMUSG00000048826 Dact2 2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2 dishevelled-binding antagonist of beta-catenin 2 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-10 chr16 44767749 44767950 + 1.078512453669 NA intron (NM_021325, intron 1 of 6) intron (NM_021325, intron 1 of 6) 2113 NM_021325 57781 Mm.416152 NM_021325 ENSMUSG00000022667 Cd200r1 CD200R|Mox2r|OX2R CD200 receptor 1 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-5 chr11 88852900 88853185 + 1.078512453669 NA intron (NR_126433, intron 2 of 4) intron (NR_126433, intron 2 of 4) 1438 NR_126433 75285 Mm.402023 NR_126433 ENSMUSG00000092399 4930556N13Rik - RIKEN cDNA 4930556N13 gene ncRNA unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669 chr1 43153702 43153939 + 1.078512453669 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 10141 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-2 chr1 132320955 132321162 + 1.078512453669 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 4933 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-17 chr9 63664297 63664536 + 1.078512453669 NA intron (NM_016769, intron 4 of 8) intron (NM_016769, intron 4 of 8) 61770 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-2 chr16 97235477 97235677 + 1.078512453669 NA Intergenic Intergenic -64842 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding common_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-2 chr16 86345766 86345976 + 1.078512453669 NA Intergenic Intergenic -444746 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-13 chr3 145104990 145105179 + 1.078512453669 NA Intergenic Intergenic -5978 NM_178697 229933 Mm.331420 NM_178697 ENSMUSG00000036960 Clca2 4732440A06|AI586120|Clca5 chloride channel accessory 2 protein-coding unique_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-3 chr8 46488798 46489010 + 1.078512453669 NA intron (NM_007981, intron 1 of 20) intron (NM_007981, intron 1 of 20) -2062 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding unique_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669 chr1 152669523 152669762 + 1.078512453669 NA intron (NM_001346118, intron 2 of 18) intron (NM_001346118, intron 2 of 18) -44425 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-21 chr3 116595295 116595503 + 1.078512453669 NA promoter-TSS (NR_152258) promoter-TSS (NR_152258) 441 NM_001289571 72776 Mm.440836 NM_028349 ENSMUSG00000027959 Sass6 2810453L12Rik SAS-6 centriolar assembly protein protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-8 chr12 53696232 53696452 + 1.078512453669 NA intron (NM_013780, intron 4 of 11) intron (NM_013780, intron 4 of 11) 447665 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-26 chr8 94974738 94974965 + 1.078512453669 NA Intergenic Intergenic -2258 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-5 chr2 84518849 84519059 + 1.078512453669 NA Intergenic Intergenic -12081 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-2 chr17 13922231 13922502 + 1.078512453669 NA Intergenic Intergenic -26007 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-18 chr4 133241047 133241250 + 1.078512453669 NA exon (NM_016693, exon 1 of 29) exon (NM_016693, exon 1 of 29) 330 NM_016693 53608 Mm.36640 NM_016693 ENSMUSG00000028862 Map3k6 Ask2|MAPKKK6|MEKK6 mitogen-activated protein kinase kinase kinase 6 protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-4 chr12 111444398 111444625 + 1.078512453669 NA intron (NM_009396, intron 1 of 11) intron (NM_009396, intron 1 of 11) 1850 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-8 chr16 55530847 55531043 + 1.078512453669 NA Intergenic Intergenic 36214 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-26 chr6 122309848 122310118 + 1.078512453669 NA intron (NM_010749, intron 1 of 6) intron (NM_010749, intron 1 of 6) 1263 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-2 chr10 61276257 61276752 + 1.078512453669 NA Intergenic Intergenic -3066 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-23 chr7 56049567 56049806 + 1.078512453669 NA promoter-TSS (NM_010418) promoter-TSS (NM_010418) -469 NM_010418 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-14 chr2 118038746 118038993 + 1.078512453669 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 72333 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-9 chr5 91105153 91105361 + 1.078512453669 NA Intergenic Intergenic 30640 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-10 chr13 97669122 97669316 + 1.078512453669 NA Intergenic Intergenic 78192 NR_152140 403201 Mm.110162 NR_152140 5330416C01Rik Gm532 RIKEN cDNA 5330416C01 gene ncRNA common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-8 chr4 11675322 11675559 + 1.078512453669 NA Intergenic Intergenic -29007 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-5 chr12 53146138 53146338 + 1.078512453669 NA intron (NM_198111, intron 13 of 13) intron (NM_198111, intron 13 of 13) -102439 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669 chr11 16791674 16791864 + 1.078512453669 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 39566 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-25 chr6 118367229 118367497 + 1.078512453669 NA Intergenic Intergenic 52054 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-11 chr2 35478332 35478586 + 1.078512453669 NA Intergenic Intergenic -17010 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-13 chr16 57536402 57536733 + 1.078512453669 NA intron (NM_001040397, intron 4 of 4) intron (NM_001040397, intron 4 of 4) -12675 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-24 chr7 65959069 65959297 + 1.078512453669 NA exon (NM_001291184, exon 8 of 21) exon (NM_001291184, exon 8 of 21) 97047 NM_011048 18553 Mm.294007 NM_011048 ENSMUSG00000030513 Pcsk6 C86343|Pace4|SPC4|b2b2830Clo proprotein convertase subtilisin/kexin type 6 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-3 chr1 79471282 79471521 + 1.078512453669 NA Intergenic Intergenic -31311 NM_001310680 20254 Mm.5038 NM_009129 ENSMUSG00000050711 Scg2 Chgc|SgII secretogranin II protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-10 chr18 80535590 80535823 + 1.078512453669 NA Intergenic MLTR11B|LTR|ERVK 8840 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-24 chr6 97221896 97222104 + 1.078512453669 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 11208 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding unique_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669-4 chr18 56895521 56895749 + 1.078512453669 NA intron (NM_177115, intron 1 of 4) PB1D10|SINE|Alu 29913 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-2 chr10 56487097 56487307 + 1.078512453669 NA Intergenic Intergenic 55221 NR_152768 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-31 chr9 107298394 107298637 + 1.078512453669 NA intron (NM_001317354, intron 1 of 1) intron (NM_001317354, intron 1 of 1) 1856 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak1_9_10_-0.402679696092379_3.25809177059111_1.078512453669 chr10 24476675 24476889 + 1.078512453669 NA Intergenic Intergenic -118660 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-14 chr17 6016078 6016283 + 1.078512453669 NA intron (NM_001357667, intron 11 of 24) intron (NM_001357667, intron 11 of 24) 8600 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-21 chr5 151093469 151093716 + 1.078512453669 NA intron (NR_153382, intron 2 of 13) intron (NR_153382, intron 2 of 13) 96601 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-27 chr8 54606270 54606457 + 1.078512453669 NA intron (NM_133711, intron 5 of 5) intron (NM_133711, intron 5 of 5) 5582 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-5 chr11 72041253 72041443 + 1.078512453669 NA Intergenic Intergenic -1154 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding common_peak2_11_8_0.148005624576183_3.2439278137304_1.078512453669-11 chr9 120023779 120023992 + 1.078512453669 NA promoter-TSS (NM_011724) promoter-TSS (NM_011724) -287 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-5 chr8 105505692 105505926 + 1.078512453669 NA Intergenic Intergenic -8907 NM_175160 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding common_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-6 chr13 33003587 33003780 + 1.078512453669 NA promoter-TSS (NM_009256) promoter-TSS (NM_009256) -858 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding unique_peak2_9_10_-0.402679696092379_3.25809177059111_1.078512453669-11 chr17 86964922 86965135 + 1.078512453669 NA intron (NM_145491, intron 2 of 4) intron (NM_145491, intron 2 of 4) 1917 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding unique_peak1_11_8_0.148005624576183_3.2439278137304_1.078512453669-4 chr11 68864457 68864652 + 1.078512453669 NA Intergenic Intergenic -11423 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak1_749_541_0.159477383060038_9.16188773288389_1.07755530843281 chr15 102961388 102966534 + 1.07755530843281 NA Intergenic Intergenic -2835 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding common_peak1_69_79_-0.477627081914804_6.08311455392996_1.07722485289275 chr12 112999962 113000690 + 1.07722485289275 NA exon (NM_028193, exon 1 of 18) exon (NM_028193, exon 1 of 18) 295 NM_028193 72308 Mm.196721 NM_028193 ENSMUSG00000011158 Brf1 2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein-coding common_peak2_68_79_-0.498239190863654_6.07280849945554_1.07722485289275 chr12 4234015 4234615 + 1.07722485289275 NA promoter-TSS (NM_001361641) promoter-TSS (NM_001361641) 288 NM_001204912 69709 Mm.250552 NM_001204912 ENSMUSG00000096199 Ptrhd1 2410017P09Rik peptidyl-tRNA hydrolase domain containing 1 protein-coding common_peak2_68_79_-0.498239190863654_6.07280849945554_1.07722485289275-2 chr15 59373809 59374557 + 1.07722485289275 NA promoter-TSS (NM_026746) promoter-TSS (NM_026746) -15 NM_026746 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak1_68_79_-0.498239190863654_6.07280849945554_1.07722485289275 chr12 25097812 25098766 + 1.07722485289275 NA Intergenic Intergenic -2197 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_69_79_-0.477627081914804_6.08311455392996_1.07722485289275 chr5 4757207 4757932 + 1.07722485289275 NA exon (NM_021457, exon 1 of 1) exon (NM_021457, exon 1 of 1) 647 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding common_peak1_68_79_-0.498239190863654_6.07280849945554_1.07722485289275-2 chr5 111330804 111331618 + 1.07722485289275 NA intron (NM_001359216, intron 1 of 9) intron (NM_001359216, intron 1 of 9) 514 NM_001359216 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_96_57_0.453629559283506_6.08479577476932_1.07722485289274 chr3 116711578 116712562 + 1.07722485289274 NA intron (NM_001362374, intron 1 of 8) CpG 210 NM_144902 229782 Mm.190758 NM_144902 ENSMUSG00000027957 Slc35a3 2310050P13Rik solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 protein-coding common_peak2_95_57_0.438784692171191_6.07737334121317_1.07722485289274 chr11 61563552 61564621 + 1.07722485289274 NA intron (NM_001252189, intron 1 of 8) intron (NM_001252189, intron 1 of 8) 15601 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding common_peak1_95_57_0.438784692171191_6.07737334121317_1.07722485289274 chr9 107770410 107770924 + 1.07722485289274 NA non-coding (NR_153190, exon 1 of 24) non-coding (NR_153190, exon 1 of 24) 335 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding common_peak1_96_57_0.453629559283506_6.08479577476932_1.07722485289274 chr4 141598656 141599614 + 1.07722485289274 NA intron (NM_133754, intron 1 of 8) MIRb|SINE|MIR 789 NM_001163256 74202 Mm.490327 NM_133754 ENSMUSG00000006219 Fblim1 2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s) filamin binding LIM protein 1 protein-coding common_peak1_177_179_-0.310600849502991_7.33655267157818_1.07721815332376 chr3 121650508 121652340 + 1.07721815332376 NA Intergenic (TATG)n|Simple_repeat|Simple_repeat -4971 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_116_124_-0.385629885325309_6.77296934199943_1.0769665927702 chr9 43104996 43106430 + 1.0769665927702 NA promoter-TSS (NM_027144) promoter-TSS (NM_027144) 5 NM_001359232 69632 Mm.275266 NM_027144 ENSMUSG00000059495 Arhgef12 2310014B11Rik|AU019857|Larg|mKIAA0382 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding common_peak2_151_96_0.355140653211531_6.77748316879289_1.0769665927702 chr1 36938814 36940313 + 1.0769665927702 NA promoter-TSS (NM_018872) promoter-TSS (NM_018872) -36 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_151_96_0.355140653211531_6.77748316879289_1.0769665927702 chr5 121710937 121713010 + 1.0769665927702 NA exon (NM_009125, exon 1 of 25) exon (NM_009125, exon 1 of 25) 364 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding common_peak2_151_96_0.355140653211531_6.77748316879289_1.0769665927702-2 chr10 89745039 89745682 + 1.0769665927702 NA intron (NM_029166, intron 1 of 20) CpG 369 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding common_peak2_113_69_0.41366106025439_6.33611354707216_1.07595841370938 chr8 117284144 117284886 + 1.07595841370938 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 27496 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_292_281_-0.244348377681424_8.01737716355808_1.07553069469808 chr2 60690026 60693811 + 1.07553069469808 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -18225 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_104_63_0.425136615200015_6.21256830760001_1.07506677869082 chr3 90254321 90255194 + 1.07506677869082 NA intron (NM_001357152, intron 1 of 9) intron (NM_001357152, intron 1 of 9) 899 NM_001357152 74343 Mm.35627 NM_028881 ENSMUSG00000027936 Crtc2 4632407F12Rik|Torc2 CREB regulated transcription coactivator 2 protein-coding common_peak1_104_63_0.425136615200015_6.21256830760001_1.07506677869082 chr17 87281638 87282773 + 1.07506677869082 NA promoter-TSS (NM_028639) promoter-TSS (NM_028639) 609 NR_015506 74597 Mm.63783 NR_015506 ENSMUSG00000085287 4833418N02Rik - RIKEN cDNA 4833418N02 gene ncRNA common_peak2_104_63_0.425136615200015_6.21256830760001_1.07506677869082-2 chr8 107254269 107255074 + 1.07506677869082 NA Intergenic Intergenic -1493 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak2_156_160_-0.329499567090211_7.16616709456951_1.07470561210715 chr11 69670676 69672247 + 1.07470561210715 NA intron (NM_001159375, intron 1 of 10) CpG 962 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak2_195_128_0.308020928796312_7.16523771982141_1.07470561210715 chr19 10183098 10184223 + 1.07470561210715 NA intron (NM_146094, intron 1 of 11) intron (NM_146094, intron 1 of 11) 772 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding common_peak1_88_52_0.460386771836728_5.95811384048156_1.07077048545736-2 chr3 121968496 121969484 + 1.07077048545736 NA intron (NM_001356524, intron 1 of 22) intron (NM_001356524, intron 1 of 22) 1184 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_88_52_0.460386771836728_5.95811384048156_1.07077048545736 chr10 78574471 78575330 + 1.07077048545736 NA promoter-TSS (NM_001359303) promoter-TSS (NM_001359303) -91 NM_001359302 216136 Mm.2644 NM_173751 ENSMUSG00000032763 Ilvbl 5830463I21|AI415009 ilvB (bacterial acetolactate synthase)-like protein-coding common_peak2_88_52_0.460386771836728_5.95811384048156_1.07077048545736 chr1 64532049 64532686 + 1.07077048545736 NA promoter-TSS (NM_009952) promoter-TSS (NM_009952) -437 NM_009952 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding unique_peak1_88_52_0.460386771836728_5.95811384048156_1.07077048545736 chr4 134914039 134914936 + 1.07077048545736 NA intron (NM_027935, intron 1 of 6) intron (NM_027935, intron 1 of 6) 429 NM_027935 71817 Mm.88349 NM_027935 ENSMUSG00000028822 Tmem50a 3200001F09Rik|CAM|Smp1 transmembrane protein 50A protein-coding common_peak1_44_55_-0.59598677463102_5.50936153474209_1.0707211936214-2 chr15 11574713 11575316 + 1.0707211936214 NA Intergenic Intergenic -175356 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_44_55_-0.59598677463102_5.50936153474209_1.0707211936214 chr11 98400223 98400688 + 1.0707211936214 NA promoter-TSS (NM_001033537) promoter-TSS (NM_001033537) 35 NM_001033537 320655 Mm.86519 NM_001033537 ENSMUSG00000038208 Pgap3 CAB2|D430035D22Rik|Perld1 post-GPI attachment to proteins 3 protein-coding common_peak2_44_55_-0.59598677463102_5.50936153474209_1.0707211936214-2 chr15 11574695 11575303 + 1.0707211936214 NA Intergenic Intergenic -175341 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_44_55_-0.59598677463102_5.50936153474209_1.0707211936214 chr13 75798686 75799321 + 1.0707211936214 NA Intergenic Intergenic -40882 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_66_37_0.533625504196802_5.51474026554199_1.07072119362139-4 chr9 72532302 72533032 + 1.07072119362139 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 427 NM_001033536 319758 Mm.32081 NM_001033536 ENSMUSG00000037674 Rfx7 2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2 regulatory factor X, 7 protein-coding common_peak1_66_37_0.533625504196802_5.51474026554199_1.07072119362139-3 chr4 148040232 148040989 + 1.07072119362139 NA promoter-TSS (NM_001161798) promoter-TSS (NM_001161798) -579 NR_027809 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 methylenetetrahydrofolate reductase protein-coding common_peak1_66_37_0.533625504196802_5.51474026554199_1.07072119362139-2 chr13 23740021 23740866 + 1.07072119362139 NA TTS (NM_015786) TTS (NM_015786) 1636 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding common_peak1_66_37_0.533625504196802_5.51474026554199_1.07072119362139 chr11 95859400 95860046 + 1.07072119362139 NA intron (NR_045187, intron 1 of 1) CpG 906 NR_045187 73906 Mm.399894 NR_045187 ENSMUSG00000086015 4833417C18Rik - RIKEN cDNA 4833417C18 gene ncRNA common_peak1_122_76_0.385008629132992_6.4592908552614_1.07036284753591-2 chr6 83053023 83054405 + 1.07036284753591 NA promoter-TSS (NM_007517) promoter-TSS (NM_007517) -807 NM_007517 11993 Mm.386752 NM_007517 ENSMUSG00000068328 Aup1 AA589454 ancient ubiquitous protein 1 protein-coding common_peak1_123_76_0.396608019284637_6.46509055033722_1.07036284753591 chr15 97784329 97785165 + 1.07036284753591 NA intron (NM_026353, intron 1 of 2) CpG 382 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak1_122_76_0.385008629132992_6.4592908552614_1.07036284753591 chr3 88511428 88513127 + 1.07036284753591 NA Intergenic Intergenic -8925 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_122_76_0.385008629132992_6.4592908552614_1.07036284753591 chr19 5456509 5457870 + 1.07036284753591 NA exon (NM_198616, exon 1 of 1) exon (NM_198616, exon 1 of 1) 374 NM_198616 240514 Mm.329657 NM_198616 ENSMUSG00000095098 Ccdc85b AI842788|BB115872 coiled-coil domain containing 85B protein-coding common_peak2_118_125_-0.372844996162579_6.79085742541863_1.06993855485892 chr9 102725128 102726678 + 1.06993855485892 NA intron (NM_019764, intron 5 of 9) intron (NM_019764, intron 5 of 9) 8099 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_152_97_0.349737238102909_6.78957846316666_1.06993855485892 chr15 5185430 5186652 + 1.06993855485892 NA intron (NM_026213, intron 1 of 4) intron (NM_026213, intron 1 of 4) 481 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_388_364_-0.210564754390118_8.40647027657232_1.06954840702676 chr8 84659872 84662661 + 1.06954840702676 NA TTS (NM_010499) TTS (NM_010499) 1586 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164 chr12 80436269 80436900 + 1.06916698217164 NA promoter-TSS (NM_177267) promoter-TSS (NM_177267) 17 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding unique_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164 chr6 91686280 91686928 + 1.06916698217164 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 2537 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-2 chr12 12941399 12941832 + 1.06916698217164 NA intron (NM_008709, intron 1 of 2) CpG 221 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164-3 chr15 79438542 79438996 + 1.06916698217164 NA intron (NM_001359863, intron 2 of 10) intron (NM_001359863, intron 2 of 10) 3049 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-3 chr3 95651291 95651842 + 1.06916698217164 NA Intergenic B3A|SINE|B2 -7155 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164 chr1 156040957 156041832 + 1.06916698217164 NA intron (NM_172843, intron 2 of 6) intron (NM_172843, intron 2 of 6) 533 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak2_42_21_0.686810911572135_4.80283707442336_1.06916698217164-2 chr2 24453487 24453878 + 1.06916698217164 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 21917 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_24_35_-0.80057115971676_4.76963942158393_1.06916698217164 chr9 102672761 102672985 + 1.06916698217164 NA Intergenic Intergenic -44931 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164-3 chr11 94653543 94654053 + 1.06916698217164 NA promoter-TSS (NM_177752) promoter-TSS (NM_177752) 7 NM_053161 94064 Mm.34951 NM_053161 ENSMUSG00000024414 Mrpl27 A630055F16Rik|D11Moh47|D18Ertd643e mitochondrial ribosomal protein L27 protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-7 chr5 8422941 8423210 + 1.06916698217164 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 237 NM_178766 319653 Mm.146262 NM_178766 ENSMUSG00000054099 Slc25a40 B230315F11Rik solute carrier family 25, member 40 protein-coding common_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164 chr10 79669353 79669634 + 1.06916698217164 NA promoter-TSS (NM_148934) promoter-TSS (NM_148934) 83 NM_148934 110012 Mm.22623 NM_148934 ENSMUSG00000020308 Tpgs1 AV005629|Gm16517|Gtrgeo22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding common_peak1_25_35_-0.744386826987199_4.79773158794871_1.06916698217164 chr17 78388620 78389089 + 1.06916698217164 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 29298 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-2 chr7 28742004 28742242 + 1.06916698217164 NA promoter-TSS (NM_001360250) promoter-TSS (NM_001360250) 155 NM_023637 71984 Mm.333725 NM_023637 ENSMUSG00000070699 Sars2 2410015F05Rik|D7Ertd353e|SerRS|SerRSmt seryl-aminoacyl-tRNA synthetase 2 protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-4 chr13 67552871 67553342 + 1.06916698217164 NA promoter-TSS (NM_001035231) promoter-TSS (NM_001035231) 46 NM_001035231 212276 Mm.422831 NM_183145 ENSMUSG00000095432 Zfp748 KRAB-O|Rslcan20/21|Zfp208|mszf54 zinc finger protein 748 protein-coding common_peak2_41_21_0.653103077382083_4.78598315732834_1.06916698217164 chr11 101119363 101119790 + 1.06916698217164 NA promoter-TSS (NM_134024) promoter-TSS (NM_134024) 265 NM_026501 67998 Mm.33881 NM_026501 ENSMUSG00000017802 Retreg3 1300010M03Rik|4933404C01Rik|AI551748|Fam134c reticulophagy regulator family member 3 protein-coding common_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164-5 chr19 27371062 27371433 + 1.06916698217164 NA Intergenic Intergenic 48628 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding common_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-5 chr7 80246507 80246859 + 1.06916698217164 NA intron (NM_177765, intron 1 of 14) intron (NM_177765, intron 1 of 14) 307 NM_177765 269954 Mm.276780 NM_177765 ENSMUSG00000045467 Ttll13 1700111A04Rik|4921538O11|BC024578 tubulin tyrosine ligase-like family, member 13 protein-coding common_peak2_41_21_0.653103077382083_4.78598315732834_1.06916698217164-2 chr14 63860534 63860788 + 1.06916698217164 NA intron (NM_028228, intron 1 of 6) intron (NM_028228, intron 1 of 6) 349 NM_028228 72400 Mm.379214 NM_028228 ENSMUSG00000021958 Pinx1 2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1 PIN2/TERF1 interacting, telomerase inhibitor 1 protein-coding common_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164-2 chr19 38004298 38004630 + 1.06916698217164 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 39113 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-2 chr12 80373263 80373762 + 1.06916698217164 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 18165 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-2 chr2 153443712 153444392 + 1.06916698217164 NA intron (NM_001134300, intron 4 of 10) CpG 427 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164-4 chr3 87165689 87166150 + 1.06916698217164 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 8828 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164 chr11 116328471 116328959 + 1.06916698217164 NA Intergenic Intergenic 6639 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-6 chr4 118017205 118017950 + 1.06916698217164 NA intron (NM_001285520, intron 4 of 11) intron (NM_001285520, intron 4 of 11) -87814 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding common_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164-2 chr11 53801978 53802479 + 1.06916698217164 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 31755 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_41_21_0.653103077382083_4.78598315732834_1.06916698217164-3 chr15 98526367 98526681 + 1.06916698217164 NA promoter-TSS (NR_034052) promoter-TSS (NR_034052) -65 NR_034052 100217416 Mm.296240 NR_034052 ENSMUSG00000065939 Snora2b MBI-137 small nucleolar RNA, H/ACA box 2B snoRNA common_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164 chr2 129066034 129066622 + 1.06916698217164 NA intron (NM_027192, intron 1 of 6) CpG 381 NM_027192 69737 Mm.33909 NM_027192 ENSMUSG00000027394 Ttl 2410003M22Rik|2700049H19Rik|AI848570 tubulin tyrosine ligase protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-3 chr13 28671539 28672211 + 1.06916698217164 NA intron (NR_045054, intron 3 of 7) intron (NR_045054, intron 3 of 7) 38998 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-3 chrX 19167375 19167871 + 1.06916698217164 NA Intergenic Intergenic -20652 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164 chr1 98094647 98095425 + 1.06916698217164 NA intron (NM_001357127, intron 1 of 25) intron (NM_001357127, intron 1 of 25) 596 NM_013626 18484 Mm.5121 NM_013626 ENSMUSG00000026335 Pam PHM peptidylglycine alpha-amidating monooxygenase protein-coding unique_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164 chr15 37609435 37610010 + 1.06916698217164 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 70852 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_41_21_0.653103077382083_4.78598315732834_1.06916698217164-4 chr2 32534611 32535041 + 1.06916698217164 NA promoter-TSS (NM_153560) promoter-TSS (NM_153560) -533 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_42_21_0.686810911572135_4.80283707442336_1.06916698217164-3 chr3 107895998 107896317 + 1.06916698217164 NA promoter-TSS (NR_015459) promoter-TSS (NR_015459) 56 NR_015459 329735 Mm.270500 NM_177858 ENSMUSG00000086968 4933431E20Rik - RIKEN cDNA 4933431E20 gene ncRNA common_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164-4 chr17 26123920 26124452 + 1.06916698217164 NA TTS (NM_021793) TTS (NM_021793) 683 NM_024227 68611 Mm.273102 NM_024227 ENSMUSG00000024181 Mrpl28 1110015G04Rik|L28mt|MAAT1|MRP-L28|p15 mitochondrial ribosomal protein L28 protein-coding unique_peak2_24_35_-0.80057115971676_4.76963942158393_1.06916698217164-2 chr8 110780151 110780749 + 1.06916698217164 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 25474 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-4 chr4 152361708 152362182 + 1.06916698217164 NA intron (NM_001081376, intron 9 of 41) intron (NM_001081376, intron 9 of 41) 23294 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding common_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164-3 chr3 79153084 79153947 + 1.06916698217164 NA Intergenic Intergenic -7640 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_42_21_0.686810911572135_4.80283707442336_1.06916698217164 chr19 6840853 6841186 + 1.06916698217164 NA promoter-TSS (NM_019924) promoter-TSS (NM_019924) -392 NM_019924 56613 Mm.20914 NM_019924 ENSMUSG00000024952 Rps6ka4 1110069D02Rik|90kDa|AI848992|Msk2|mMSK2 ribosomal protein S6 kinase, polypeptide 4 protein-coding unique_peak1_41_21_0.653103077382083_4.78598315732834_1.06916698217164-4 chrX 73566947 73567421 + 1.06916698217164 NA intron (NM_177236, intron 20 of 20) intron (NM_177236, intron 20 of 20) 64098 NM_177236 320707 Mm.210095 NM_177236 ENSMUSG00000031376 Atp2b3 6430519O13Rik|Pmca3 ATPase, Ca++ transporting, plasma membrane 3 protein-coding unique_peak1_42_21_0.686810911572135_4.80283707442336_1.06916698217164-2 chr11 44534384 44535040 + 1.06916698217164 NA intron (NM_001166553, intron 3 of 5) intron (NM_001166553, intron 3 of 5) 15335 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak2_25_35_-0.744386826987199_4.79773158794871_1.06916698217164-5 chr4 95160931 95161337 + 1.06916698217164 NA Intergenic Intergenic -108912 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_142_90_0.359823913062437_6.68770659672991_1.06794926236629 chr15 5185509 5186608 + 1.06794926236629 NA intron (NM_026213, intron 1 of 4) intron (NM_026213, intron 1 of 4) 498 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak1_142_90_0.359823913062437_6.68770659672991_1.06794926236629 chr11 120254138 120255102 + 1.06794926236629 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 21673 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_142_90_0.359823913062437_6.68770659672991_1.06794926236629-2 chr19 4126028 4127275 + 1.06794926236629 NA promoter-TSS (NM_016666) promoter-TSS (NM_016666) 691 NM_025889 66990 Mm.276255 NM_025889 Tmem134 2410001H17Rik|AI463452 transmembrane protein 134 protein-coding common_peak2_109_117_-0.390865727584147_6.68721018556977_1.06794926236629 chr1 71651527 71653004 + 1.06794926236629 NA intron (NM_001276412, intron 1 of 44) intron (NM_001276412, intron 1 of 44) 969 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak2_101_109_-0.397748233533998_6.58248559675766_1.06792319480899 chr1 92129307 92130617 + 1.06792319480899 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 50379 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_133_83_0.382180615288383_6.58340773042295_1.06792319480896 chr12 80945451 80946118 + 1.06792319480896 NA promoter-TSS (NR_045057) promoter-TSS (NR_045057) 285 NM_001347415 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak2_133_83_0.382180615288383_6.58340773042295_1.06792319480896 chr11 77982878 77984295 + 1.06792319480896 NA intron (NM_174852, intron 1 of 14) intron (NM_174852, intron 1 of 14) 770 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak2_127_134_-0.367940491552767_6.89284535127445_1.06702001597824 chr9 52047945 52049193 + 1.06702001597824 NA intron (NM_009041, intron 1 of 13) CpG 136 NR_023357 629557 Mm.422775 NR_023357 Gm6981 EG629557 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_81_47_0.485997066879282_5.8279610341608_1.06690755293406-2 chr15 76246931 76247545 + 1.06690755293406 NA promoter-TSS (NR_105918) promoter-TSS (NR_105918) 431 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding common_peak2_56_67_-0.537463784477738_5.81873094901147_1.06690755293406-2 chr2 59161015 59161901 + 1.06690755293406 NA promoter-TSS (NM_001001178) promoter-TSS (NM_001001178) 608 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding common_peak2_56_67_-0.537463784477738_5.81873094901147_1.06690755293406 chr11 117940208 117941319 + 1.06690755293406 NA Intergenic Intergenic 28603 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_81_47_0.485997066879282_5.8279610341608_1.06690755293406 chr19 28288599 28289206 + 1.06690755293406 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -277736 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_81_47_0.485997066879282_5.8279610341608_1.06690755293406-2 chr9 49924304 49924942 + 1.06690755293406 NA Intergenic Intergenic -125230 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_81_47_0.485997066879282_5.8279610341608_1.06690755293406 chr14 16249366 16249981 + 1.06690755293406 NA promoter-TSS (NM_001359882) promoter-TSS (NM_001359882) 135 NM_027695 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak1_56_67_-0.537463784477738_5.81873094901147_1.06690755293406 chr12 55397786 55398668 + 1.06690755293406 NA promoter-TSS (NM_011968) promoter-TSS (NM_011968) -598 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak2_73_42_0.4976410067821_5.67508525809315_1.06647553678992 chr19 5729219 5729637 + 1.06647553678992 NA TTS (NM_020491) TTS (NM_020491) 238 NM_181452 17826 Mm.391142 NM_023166 ENSMUSG00000024939 Fam89b 1110021A21Rik|MMTV|Mtvr2 family with sequence similarity 89, member B protein-coding common_peak2_50_61_-0.563529850822968_5.67243138497539_1.06647553678992 chr9 70542807 70543344 + 1.06647553678992 NA exon (NM_025690, exon 1 of 21) exon (NM_025690, exon 1 of 21) 360 NM_025690 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding common_peak1_73_42_0.4976410067821_5.67508525809315_1.06647553678992 chr6 125231355 125232317 + 1.06647553678992 NA promoter-TSS (NM_145391) promoter-TSS (NM_145391) 24 NM_145391 213233 Mm.296902 NM_145391 ENSMUSG00000038213 Tapbpl BC017613|TAPBPL-R|Tapbplr TAP binding protein-like protein-coding common_peak1_50_61_-0.563529850822968_5.67243138497539_1.06647553678992 chr13 51961286 51961777 + 1.06647553678992 NA Intergenic Intergenic 114856 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_84_94_-0.447422831813862_6.34614419242402_1.06643924410408-2 chr3 146498949 146499620 + 1.06643924410408 NA promoter-TSS (NM_010318) promoter-TSS (NM_010318) 469 NM_001316756 70951 Mm.383235 NM_027617 ENSMUSG00000028188 Spata1 4921536I21Rik|AV266943|SP-2 spermatogenesis associated 1 protein-coding common_peak1_84_94_-0.447422831813862_6.34614419242402_1.06643924410408 chr11 53763246 53764402 + 1.06643924410408 NA promoter-TSS (NR_106131) promoter-TSS (NR_106131) -170 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak1_114_70_0.405708101472206_6.35260117024078_1.06643924410408 chr5 29841385 29842492 + 1.06643924410408 NA Intergenic Intergenic -106002 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_70_80_-0.475229261177893_6.10223537229568_1.06587805992858 chr13 73679910 73680554 + 1.06587805992858 NA 3' UTR (NM_028878, exon 12 of 12) 3' UTR (NM_028878, exon 12 of 12) -2209 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding common_peak2_70_80_-0.475229261177893_6.10223537229568_1.06587805992858-2 chr19 23140343 23141524 + 1.06587805992858 NA promoter-TSS (NM_010638) promoter-TSS (NM_010638) -293 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_97_58_0.443660114430969_6.10447310657733_1.06587805992858 chr11 16801367 16802754 + 1.06587805992858 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 49857 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_70_80_-0.475229261177893_6.10223537229568_1.06587805992858 chr13 5860407 5861109 + 1.06587805992858 NA promoter-TSS (NM_011803) promoter-TSS (NM_011803) -731 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_105_64_0.416347262668162_6.23054144436253_1.06473361244512 chr15 85534671 85535351 + 1.06473361244512 NA TTS (NM_001163634) TTS (NM_001163634) -31784 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak1_77_87_-0.460112821527973_6.22937520787331_1.06473361244512 chr8 33599579 33600537 + 1.06473361244512 NA intron (NM_017374, intron 1 of 6) CpG 437 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-6 chr15 95811236 95811550 + 1.06461347261981 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 18679 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-14 chr5 146963437 146963701 + 1.06461347261981 NA intron (NM_001256101, intron 1 of 4) CpG 228 NM_001256101 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding common_peak2_27_12_0.831259375650833_4.11606940596651_1.06461347261981-3 chr5 135879681 135879898 + 1.06461347261981 NA Intergenic Intergenic -8130 NM_013560 15507 Mm.13849 NM_013560 ENSMUSG00000004951 Hspb1 27kDa|Hsp25 heat shock protein 1 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-9 chr2 24412429 24413000 + 1.06461347261981 NA Intergenic Intergenic 26098 NM_001355232 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-2 chr1 177443554 177444150 + 1.06461347261981 NA promoter-TSS (NM_001355103) promoter-TSS (NM_001355103) -801 NM_001355103 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238.|zfp-238 zinc finger and BTB domain containing 18 protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-3 chr19 27364572 27365008 + 1.06461347261981 NA Intergenic Intergenic 42171 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-12 chr3 84315533 84316036 + 1.06461347261981 NA Intergenic Intergenic -11009 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-2 chr16 86304218 86304499 + 1.06461347261981 NA Intergenic Intergenic -403233 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-3 chr11 31722865 31723289 + 1.06461347261981 NA Intergenic Intergenic -51215 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-6 chr8 18784014 18784368 + 1.06461347261981 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -42629 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981 chr1 53352126 53352442 + 1.06461347261981 NA intron (NM_133728, intron 1 of 5) intron (NM_133728, intron 1 of 5) 468 NM_001290984 70396 Mm.285783 NM_133728 ENSMUSG00000026095 Asnsd1 2210409M21Rik asparagine synthetase domain containing 1 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-17 chr7 74042928 74043604 + 1.06461347261981 NA Intergenic Intergenic -29584 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_27_12_0.831259375650833_4.11606940596651_1.06461347261981 chr11 74572483 74572700 + 1.06461347261981 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 17567 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-20 chr9 72289225 72289685 + 1.06461347261981 NA intron (NM_146224, intron 1 of 21) intron (NM_146224, intron 1 of 21) 14567 NM_001311105 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-3 chr13 75824536 75824900 + 1.06461347261981 NA Intergenic Intergenic -15167 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981 chr1 153571917 153572304 + 1.06461347261981 NA Intergenic Intergenic -22396 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-2 chr10 60209989 60210356 + 1.06461347261981 NA intron (NM_016803, intron 1 of 3) PB1D7|SINE|Alu 9088 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-9 chr7 145024806 145025186 + 1.06461347261981 NA Intergenic Intergenic -85071 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-6 chr2 127251655 127252078 + 1.06461347261981 NA intron (NM_175145, intron 2 of 3) intron (NM_175145, intron 2 of 3) 3891 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-10 chr8 86893890 86894319 + 1.06461347261981 NA Intergenic Intergenic -8846 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-6 chr2 19657764 19658040 + 1.06461347261981 NA promoter-TSS (NR_033642) promoter-TSS (NR_033642) -5 NR_033642 100041244 Mm.407223 NR_033642 Gm3230 - predicted gene 3230 ncRNA unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-7 chr17 33718176 33718498 + 1.06461347261981 NA intron (NM_001252480, intron 1 of 4) MIRc|SINE|MIR 340 NM_145486 224703 Mm.311439 NM_145486 ENSMUSG00000079557 March2 9530046H09Rik|MARCH-II membrane-associated ring finger (C3HC4) 2 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-15 chr7 34265425 34265922 + 1.06461347261981 NA intron (NM_172741, intron 1 of 12) intron (NM_172741, intron 1 of 12) 19936 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-5 chr15 32320631 32321203 + 1.06461347261981 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 76104 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding common_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981 chr1 43159717 43160002 + 1.06461347261981 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 4102 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-10 chr2 158218700 158219271 + 1.06461347261981 NA intron (NM_001131021, intron 2 of 15) ID_B1|SINE|B4 10239 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-4 chr15 37961191 37961406 + 1.06461347261981 NA promoter-TSS (NM_199476) promoter-TSS (NM_199476) -243 NM_199476 382985 Mm.24738 NM_199476 ENSMUSG00000022292 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-19 chr9 64703454 64704006 + 1.06461347261981 NA intron (NM_001134399, intron 23 of 24) MIRc|SINE|MIR 34026 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-4 chr6 34620151 34620537 + 1.06461347261981 NA intron (NM_001347100, intron 1 of 13) MLTR14|LTR|ERV1 21840 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-8 chr4 133627288 133627809 + 1.06461347261981 NA intron (NM_001017968, intron 1 of 7) B2_Mm1a|SINE|B2 5881 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-7 chr2 71367762 71368081 + 1.06461347261981 NA promoter-TSS (NM_172436) promoter-TSS (NM_172436) -367 NM_172436 78830 Mm.30928 NM_172436 ENSMUSG00000027010 Slc25a12 2610002D09Rik|AI839531|B230107K20Rik|BB129864 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-4 chr11 97699142 97699514 + 1.06461347261981 NA promoter-TSS (NM_001163307) promoter-TSS (NM_001163307) 56 NM_001163307 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-18 chr7 123084865 123085509 + 1.06461347261981 NA Intergenic Intergenic -38698 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-10 chrX 162759666 162760072 + 1.06461347261981 NA promoter-TSS (NM_009031) promoter-TSS (NM_009031) -503 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7, chromatin remodeling factor protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-4 chr12 79295660 79296106 + 1.06461347261981 NA intron (NM_001008550, intron 1 of 41) intron (NM_001008550, intron 1 of 41) 399 NM_001008550 211978 Mm.297919 NM_001008550 ENSMUSG00000066440 Zfyve26 4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321 zinc finger, FYVE domain containing 26 protein-coding common_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-5 chr2 126034143 126034487 + 1.06461347261981 NA promoter-TSS (NM_008008) promoter-TSS (NM_008008) -343 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-2 chr11 43821333 43821970 + 1.06461347261981 NA intron (NM_007416, intron 1 of 1) ID_B1|SINE|B4 14838 NM_007416 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981 chr1 133309949 133310383 + 1.06461347261981 NA intron (NM_026680, intron 1 of 4) intron (NM_026680, intron 1 of 4) 343 NM_026680 68338 Mm.247935 NM_026680 ENSMUSG00000103421 Golt1a 0610012C01Rik|Kiss1|metastatin golgi transport 1A protein-coding common_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-2 chr13 35395250 35395555 + 1.06461347261981 NA Intergenic Intergenic -183354 NR_126478 75543 Mm.489052 NR_126478 ENSMUSG00000113770 1700019C18Rik - RIKEN cDNA 1700019C18 gene ncRNA unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-13 chr4 135405000 135405293 + 1.06461347261981 NA Intergenic Intergenic -6919 NM_145555 230822 Mm.35548 NM_145555 ENSMUSG00000043924 Ncmap A330049M08Rik|AA545175|Mp11 noncompact myelin associated protein protein-coding common_peak2_27_12_0.831259375650833_4.11606940596651_1.06461347261981-2 chr18 60481415 60481655 + 1.06461347261981 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 20448 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-7 chr3 144572521 144573088 + 1.06461347261981 NA intron (NM_053102, intron 1 of 4) RSINE1|SINE|B4 2377 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-7 chr9 44417675 44417974 + 1.06461347261981 NA intron (NR_151776, intron 1 of 10) intron (NR_151776, intron 1 of 10) 245 NR_151776 382073 Mm.259573 NM_201372 ENSMUSG00000043923 Ccdc84 D630044F24Rik|Gm1114 coiled-coil domain containing 84 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-3 chr11 31608612 31609116 + 1.06461347261981 NA Intergenic MER5A|DNA|hAT-Charlie 62998 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-16 chr7 55637957 55638302 + 1.06461347261981 NA Intergenic Intergenic -130055 NM_001310740 233274 Mm.44425 NM_178706 ENSMUSG00000051504 Siglech 6430529G09Rik|Siglec-H sialic acid binding Ig-like lectin H protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-3 chr10 61374495 61374902 + 1.06461347261981 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 8825 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding common_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-6 chr4 139225707 139225944 + 1.06461347261981 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 31714 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-9 chr6 72512249 72512619 + 1.06461347261981 NA Intergenic Intergenic -31957 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_13_23_-1.04620842735599_4.06185828704316_1.06461347261981 chr1 177559152 177559375 + 1.06461347261981 NA Intergenic Intergenic 83680 NR_037994 75589 Mm.86666 NR_037994 ENSMUSG00000101746 2310043L19Rik - RIKEN cDNA 2310043L19 gene ncRNA unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-2 chr10 86203404 86204020 + 1.06461347261981 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -96700 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-11 chr2 164521372 164521808 + 1.06461347261981 NA Intergenic PB1D7|SINE|Alu 24065 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981 chr1 16621131 16621436 + 1.06461347261981 NA Intergenic Intergenic -1945 NM_001271017 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-4 chr12 45073739 45074273 + 1.06461347261981 NA intron (NM_144552, intron 1 of 5) CpG 477 NM_144552 217517 Mm.285400 NM_144552 ENSMUSG00000046314 Stxbp6 BC024598|C85317 syntaxin binding protein 6 (amisyn) protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-5 chr8 10978016 10978279 + 1.06461347261981 NA Intergenic Intergenic -29703 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA common_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-3 chr5 34999668 35000054 + 1.06461347261981 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 783 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak1_13_23_-1.04620842735599_4.06185828704316_1.06461347261981 chr15 80139311 80139566 + 1.06461347261981 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 6284 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak2_27_12_0.831259375650833_4.11606940596651_1.06461347261981-5 chr9 44498390 44498704 + 1.06461347261981 NA promoter-TSS (NM_030256) promoter-TSS (NM_030256) -589 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_27_12_0.831259375650833_4.11606940596651_1.06461347261981-4 chr7 82479809 82480095 + 1.06461347261981 NA intron (NM_001190374, intron 7 of 29) intron (NM_001190374, intron 7 of 29) 144258 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-8 chr7 72519815 72520065 + 1.06461347261981 NA Intergenic Intergenic -213345 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-8 chr19 6942744 6942999 + 1.06461347261981 NA promoter-TSS (NM_001177361) promoter-TSS (NM_001177361) 309 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_27_12_0.831259375650833_4.11606940596651_1.06461347261981-2 chr11 70018018 70018378 + 1.06461347261981 NA promoter-TSS (NM_001109752) promoter-TSS (NM_001109752) -407 NM_001109752 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding unique_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981-5 chr13 41660031 41660309 + 1.06461347261981 NA Intergenic Intergenic 53954 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak2_13_23_-1.04620842735599_4.06185828704316_1.06461347261981-5 chr19 44888359 44888656 + 1.06461347261981 NA Intergenic Intergenic -42612 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_14_23_-0.947374975948783_4.11127501274676_1.06461347261981 chr10 60573169 60573425 + 1.06461347261981 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 123193 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding common_peak1_180_182_-0.310505248225916_7.36044721417109_1.06305489681221 chr17 36270481 36271952 + 1.06305489681221 NA intron (NM_024468, intron 1 of 6) CpG 215 NM_001357889 79263 Mm.40624 NM_024468 ENSMUSG00000045409 Trim39 1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp tripartite motif-containing 39 protein-coding unique_peak2_39_50_-0.629783378573065_5.35753365268496_1.0624982013315 chr6 47744062 47744493 + 1.0624982013315 NA promoter-TSS (NR_002841).9 promoter-TSS (NR_002841).9 -46 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_39_50_-0.629783378573065_5.35753365268496_1.0624982013315-2 chr5 135957907 135958376 + 1.0624982013315 NA Intergenic Intergenic 16335 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak2_39_50_-0.629783378573065_5.35753365268496_1.0624982013315-3 chrX 74244091 74244714 + 1.0624982013315 NA intron (NM_001290421, intron 1 of 46) intron (NM_001290421, intron 1 of 46) 2132 NM_010227 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak2_60_33_0.559693228052537_5.36730945527661_1.0624982013315-2 chr14 25520118 25520614 + 1.0624982013315 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -14073 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_60_33_0.559693228052537_5.36730945527661_1.0624982013315 chr1 45795131 45795737 + 1.0624982013315 NA 5' UTR (NM_028599, exon 1 of 21) 5' UTR (NM_028599, exon 1 of 21) 268 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak2_39_50_-0.629783378573065_5.35753365268496_1.0624982013315 chr5 104380957 104381526 + 1.0624982013315 NA Intergenic Intergenic -53870 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_60_33_0.559693228052537_5.36730945527661_1.0624982013315-2 chr15 84412821 84413242 + 1.0624982013315 NA intron (NM_001163145, intron 3 of 4) intron (NM_001163145, intron 3 of 4) 33579 NM_001347543 72301 Mm.275387 NM_001163145 ENSMUSG00000062760 1810041L15Rik Kiaa1644|Shisal1 RIKEN cDNA 1810041L15 gene protein-coding common_peak2_60_33_0.559693228052537_5.36730945527661_1.0624982013315 chr1 87959806 87960532 + 1.0624982013315 NA intron (NM_001033291, intron 19 of 27) intron (NM_001033291, intron 19 of 27) 48382 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding common_peak1_39_50_-0.629783378573065_5.35753365268496_1.0624982013315 chr7 127195513 127195925 + 1.0624982013315 NA intron (NM_001285905, intron 1 of 6) CpG 358 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak2_149_153_-0.330707055888382_7.10143301275071_1.06147625734839 chr14 7818305 7819895 + 1.06147625734839 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 1143 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_384_267_0.220292201320808_8.17623529111818_1.06124920501927 chr17 46029000 46032392 + 1.06124920501927 NA intron (NM_001025250, intron 1 of 7) CpG 1681 NM_001287058 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak1_352_243_0.231337006647985_8.04640584088688_1.06085715459296 chr15 13367008 13368752 + 1.06085715459296 NA Intergenic (T)n|Simple_repeat|Simple_repeat -194205 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_165_106_0.339801654916528_6.91136781385941_1.0606321550316 chr10 89745044 89746009 + 1.0606321550316 NA intron (NM_029166, intron 1 of 20) CpG 535 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding common_peak1_165_106_0.339801654916528_6.91136781385941_1.0606321550316-2 chr7 66374484 66375765 + 1.0606321550316 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 6600 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_110_118_-0.390076399596291_6.6997795635098_1.0605688555681 chr11 105181571 105182414 + 1.0605688555681 NA promoter-TSS (NR_027956) promoter-TSS (NR_027956) 465 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding common_peak2_110_118_-0.390076399596291_6.6997795635098_1.0605688555681-2 chr4 126259339 126260694 + 1.0605688555681 NA Intergenic Intergenic -2389 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak2_139_144_-0.342663056615619_7.00857756170713_1.0602366525316-2 chr15 57694737 57696484 + 1.0602366525316 NA intron (NM_199449, intron 1 of 3) CpG 943 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak1_176_114_0.327691657032514_7.00933587946063_1.0602366525316 chr5 136170059 136172348 + 1.0602366525316 NA promoter-TSS (NM_178751) promoter-TSS (NM_178751) -547 NM_178751 269717 Mm.308396 NM_178751 ENSMUSG00000039747 Orai2 A730041O15Rik|Tmem142b ORAI calcium release-activated calcium modulator 2 protein-coding common_peak2_139_144_-0.342663056615619_7.00857756170713_1.0602366525316 chr11 20201419 20202608 + 1.0602366525316 NA intron (NM_008996, intron 1 of 5) intron (NM_008996, intron 1 of 5) 601 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding common_peak1_102_110_-0.396828501291879_6.59600161570417_1.05996894461527 chr11 95098102 95099493 + 1.05996894461527 NA Intergenic ID_B1|SINE|B4 -21320 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak2_102_110_-0.396828501291879_6.59600161570417_1.05996894461527 chr15 73089783 73090668 + 1.05996894461527 NA promoter-TSS (NM_053068) promoter-TSS (NM_053068) -187 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-8 chr7 84336620 84337450 + 1.05951140195658 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 73003 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-4 chr18 12972332 12973051 + 1.05951140195658 NA intron (NM_008378, intron 1 of 10) intron (NM_008378, intron 1 of 10) 768 NM_008378 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding common_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658 chr18 24604000 24604665 + 1.05951140195658 NA promoter-TSS (NM_139143) promoter-TSS (NM_139143) 371 NM_021448 58523 Mm.25298 NM_021448 ENSMUSG00000024271 Elp2 AU023723|Epl2|StIP1|Statip1 elongator acetyltransferase complex subunit 2 protein-coding common_peak2_47_25_0.603380948730914_5.00213019250655_1.05951140195658-3 chr5 139909981 139910341 + 1.05951140195658 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 2218 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-5 chr16 91688222 91688679 + 1.05951140195658 NA promoter-TSS (NR_040389) promoter-TSS (NR_040389) 278 NM_021720 60364 Mm.328698 NM_021720 ENSMUSG00000022960 Donson 1110025J21Rik|AI845729|ORF60 downstream neighbor of SON protein-coding common_peak1_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-3 chr7 130574784 130575439 + 1.05951140195658 NA Intergenic Intergenic -2373 NM_001004468 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-9 chr9 46111057 46111728 + 1.05951140195658 NA intron (NM_027498, intron 1 of 24) intron (NM_027498, intron 1 of 24) 98572 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak1_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-2 chr5 122850282 122850744 + 1.05951140195658 NA intron (NM_030564, intron 1 of 5) CpG 325 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding common_peak2_48_25_0.632918425224963_5.01689893075357_1.05951140195658-5 chr8 14321264 14321691 + 1.05951140195658 NA intron (NM_172910, intron 3 of 15) MIR|SINE|MIR 225602 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658 chr5 64969843 64970603 + 1.05951140195658 NA promoter-TSS (NR_030577) promoter-TSS (NR_030577) -95 NR_030577 100124451 NR_030577 ENSMUSG00000077042 Mir574 Mirn574|mir-574|mmu-mir-574 microRNA 574 ncRNA common_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658-6 chr7 47008634 47009263 + 1.05951140195658 NA promoter-TSS (NM_175318) promoter-TSS (NM_175318) -534 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-6 chr3 28781404 28781818 + 1.05951140195658 NA intron (NM_177586, intron 1 of 4) CpG 334 NM_177586 208691 Mm.193670 NM_177586 ENSMUSG00000050192 Eif5a2 9630038B20|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding common_peak2_47_25_0.603380948730914_5.00213019250655_1.05951140195658-4 chr9 54734039 54734487 + 1.05951140195658 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 286 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding common_peak2_48_25_0.632918425224963_5.01689893075357_1.05951140195658-3 chr5 114648300 114648671 + 1.05951140195658 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 9936 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658-3 chr5 110807796 110808433 + 1.05951140195658 NA intron (NM_001347394, intron 3 of 27) intron (NM_001347394, intron 3 of 27) 1967 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-7 chr6 86252085 86252822 + 1.05951140195658 NA intron (NM_031199, intron 2 of 5) intron (NM_031199, intron 2 of 5) 57226 NM_031199 21802 Mm.137222 NM_031199 ENSMUSG00000029999 Tgfa wa-1|wa1 transforming growth factor alpha protein-coding common_peak2_47_25_0.603380948730914_5.00213019250655_1.05951140195658-2 chr17 32350275 32350574 + 1.05951140195658 NA intron (NM_017476, intron 1 of 13) intron (NM_017476, intron 1 of 13) 153 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-3 chr10 86161155 86161587 + 1.05951140195658 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 65517 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-2 chr11 120823097 120823685 + 1.05951140195658 NA intron (NM_007988, intron 1 of 42) intron (NM_007988, intron 1 of 42) 1156 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-2 chr10 62920388 62920933 + 1.05951140195658 NA promoter-TSS (NM_175194) promoter-TSS (NM_175194) 27 NM_175194 73132 Mm.37457 NM_175194 ENSMUSG00000071253 Slc25a16 3110021G18Rik|GDA|GDC|HGT.1|ML7 solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-9 chr8 18845818 18846508 + 1.05951140195658 NA promoter-TSS (NM_026792) promoter-TSS (NM_026792) -116 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658 chr11 86256943 86257367 + 1.05951140195658 NA intron (NM_027421, intron 1 of 24) CpG 413 NM_027421 70422 Mm.171304 NM_027421 ENSMUSG00000018068 Ints2 2810417D08Rik|AA408260|AI987735|mKIAA1287 integrator complex subunit 2 protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-8 chr5 53543715 53544634 + 1.05951140195658 NA Intergenic Intergenic -11605 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658-2 chr2 158625001 158625789 + 1.05951140195658 NA exon (NM_175419, exon 1 of 9) exon (NM_175419, exon 1 of 9) 482 NM_175419 109275 Mm.27747 NM_175419 ENSMUSG00000037761 Actr5 AA545173|B430109J19Rik ARP5 actin-related protein 5 protein-coding unique_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-3 chr4 141742195 141742804 + 1.05951140195658 NA Intergenic Intergenic -4176 NM_001081408 75986 Mm.30032 NM_001081408 ENSMUSG00000040706 Agmat 5033405N08Rik agmatine ureohydrolase (agmatinase) protein-coding common_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658-5 chr7 44748461 44749068 + 1.05951140195658 NA promoter-TSS (NM_178734) promoter-TSS (NM_178734) 135 NM_133945 101568 Mm.28816 NM_133945 ENSMUSG00000002205 Vrk3 AI428238 vaccinia related kinase 3 protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-3 chr17 66340383 66340930 + 1.05951140195658 NA intron (NM_001114098, intron 13 of 14) intron (NM_001114098, intron 13 of 14) 109094 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_48_25_0.632918425224963_5.01689893075357_1.05951140195658-4 chr5 143269768 143270170 + 1.05951140195658 NA promoter-TSS (NM_017467) promoter-TSS (NM_017467) 53 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak2_48_25_0.632918425224963_5.01689893075357_1.05951140195658-2 chr5 29569537 29570085 + 1.05951140195658 NA intron (NM_133907, intron 1 of 22) intron (NM_133907, intron 1 of 22) 569 NM_133907 100763 Mm.137746 NM_133907 ENSMUSG00000039000 Ube3c AI853514|mKIAA0010 ubiquitin protein ligase E3C protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-6 chr17 12119417 12120028 + 1.05951140195658 NA intron (NM_026644, intron 1 of 8) intron (NM_026644, intron 1 of 8) 438 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding unique_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658 chr10 128175964 128176606 + 1.05951140195658 NA intron (NM_001039080, intron 2 of 13) intron (NM_001039080, intron 2 of 13) 283 NM_019711 56516 Mm.42247 NM_019711 ENSMUSG00000040043 Rbms2 2610315E04Rik|Scr3 RNA binding motif, single stranded interacting protein 2 protein-coding unique_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658-2 chr7 49091728 49092508 + 1.05951140195658 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 70040 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658-4 chr11 118403761 118404383 + 1.05951140195658 NA Intergenic Intergenic -2113 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-5 chr18 32138850 32139668 + 1.05951140195658 NA intron (NM_001042767, intron 1 of 8) intron (NM_001042767, intron 1 of 8) 311 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak2_48_25_0.632918425224963_5.01689893075357_1.05951140195658 chr1 170255293 170255699 + 1.05951140195658 NA non-coding (NR_151590, exon 1 of 1) non-coding (NR_151590, exon 1 of 1) 243 NR_151590 622708 Mm.389210 NR_151590 ENSMUSG00000096964 Gm6345 EG622708 predicted gene 6345 pseudo common_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-7 chr3 136671341 136671750 + 1.05951140195658 NA intron (NM_008913, intron 1 of 13) CpG 1479 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_47_25_0.603380948730914_5.00213019250655_1.05951140195658-4 chr5 151187785 151188290 + 1.05951140195658 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 2156 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_48_25_0.632918425224963_5.01689893075357_1.05951140195658-2 chr2 30415259 30415881 + 1.05951140195658 NA promoter-TSS (NM_138748) promoter-TSS (NM_138748) 178 NM_007760 12908 Mm.20396 NM_007760 ENSMUSG00000026853 Crat AW107812|CARAT carnitine acetyltransferase protein-coding common_peak2_29_40_-0.727019459418955_4.99404227490861_1.05951140195658 chr1 135759242 135759678 + 1.05951140195658 NA Intergenic Intergenic -6625 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak1_29_40_-0.727019459418955_4.99404227490861_1.05951140195658 chr11 101232166 101232548 + 1.05951140195658 NA Intergenic Intergenic -5894 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding common_peak2_47_25_0.603380948730914_5.00213019250655_1.05951140195658 chr16 13819369 13819830 + 1.05951140195658 NA intron (NM_001346109, intron 1 of 7) CpG 348 NM_001346111 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-6 chr16 90856779 90856981 + 1.05908390183068 NA intron (NM_001316761, intron 1 of 5) intron (NM_001316761, intron 1 of 5) 26021 NM_001316761 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-17 chr7 49262391 49262630 + 1.05908390183068 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 16321 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-2 chr13 40860774 40860967 + 1.05908390183068 NA exon (NM_023887, exon 1 of 3) exon (NM_023887, exon 1 of 3) 1102 NM_023887 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding unique_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068 chr1 182022787 182022982 + 1.05908390183068 NA Intergenic Intergenic -2904 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-27 chr2 116989492 116989707 + 1.05908390183068 NA Intergenic Intergenic 89447 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-8 chr11 20899047 20899314 + 1.05908390183068 NA Intergenic Intergenic -68072 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-8 chr9 111387719 111387923 + 1.05908390183068 NA intron (NM_001164659, intron 18 of 21) intron (NM_001164659, intron 18 of 21) -51260 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-5 chr13 55329956 55330275 + 1.05908390183068 NA promoter-TSS (NM_016662) promoter-TSS (NM_016662) -385 NM_016662 17121 Mm.20350 NM_016662 ENSMUSG00000021485 Mxd3 4631412E13Rik|Mad3|bHLHc13 Max dimerization protein 3 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-5 chr14 70659370 70659585 + 1.05908390183068 NA Intergenic Intergenic -6393 NM_181345 328440 Mm.347749 NM_181345 ENSMUSG00000047911 Npm2 - nucleophosmin/nucleoplasmin 2 protein-coding common_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-5 chr5 92862124 92862421 + 1.05908390183068 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -35721 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-13 chr5 96160383 96160597 + 1.05908390183068 NA intron (NM_144910, intron 1 of 11) intron (NM_144910, intron 1 of 11) 1057 NM_001285511 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-3 chr1 170188244 170188449 + 1.05908390183068 NA Intergenic B1F1|SINE|Alu -13382 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-14 chrX 37191298 37191522 + 1.05908390183068 NA promoter-TSS (NM_019443) promoter-TSS (NM_019443) -172 NM_019443 54405 Mm.34869 NM_019443 ENSMUSG00000016427 Ndufa1 1810049F12Rik|MWFE NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-5 chr17 64330391 64330601 + 1.05908390183068 NA intron (NM_001025309, intron 1 of 9) intron (NM_001025309, intron 1 of 9) 1387 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-4 chr12 35833777 35834058 + 1.05908390183068 NA Intergenic ID_B1|SINE|B4 -91704 NM_207531 403205 Mm.190508 NM_207531 ENSMUSG00000036231 Agr3 BCMP11|E030025L21Rik|Gm888 anterior gradient 3 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-24 chr2 20555735 20555960 + 1.05908390183068 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 36334 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding common_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068 chr5 143056928 143057159 + 1.05908390183068 NA intron (NM_001359851, intron 12 of 15) B2_Mm1a|SINE|B2 55977 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding unique_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-2 chr3 86011970 86012189 + 1.05908390183068 NA Intergenic Intergenic -9588 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-38 chr8 25798237 25798502 + 1.05908390183068 NA intron (NM_026032, intron 3 of 3) intron (NM_026032, intron 3 of 3) -10105 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-7 chr10 115251784 115251980 + 1.05908390183068 NA promoter-TSS (NM_025706) promoter-TSS (NM_025706) -389 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-28 chr3 122096540 122096744 + 1.05908390183068 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 52182 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-21 chr8 92050519 92050732 + 1.05908390183068 NA Intergenic Intergenic -248971 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding common_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-6 chr7 48761611 48761815 + 1.05908390183068 NA Intergenic Intergenic -27290 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-33 chr5 20929623 20929869 + 1.05908390183068 NA intron (NM_001080977, intron 1 of 7) RSINE1|SINE|B4 -21243 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-7 chr8 85557876 85558075 + 1.05908390183068 NA Intergenic Intergenic -2704 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak1_7_9_-0.584833071096322_3.0295115593392_1.05908390183068 chr17 6141990 6142183 + 1.05908390183068 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 3938 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-16 chr13 67553375 67553672 + 1.05908390183068 NA promoter-TSS (NM_001035231) promoter-TSS (NM_001035231) 289 NR_131098 77857 Mm.160006 NR_131098 ENSMUSG00000097360 9430065F17Rik E130110G22Rik RIKEN cDNA 9430065F17 gene ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-20 chr8 34051129 34051415 + 1.05908390183068 NA Intergenic Intergenic 56542 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-2 chr1 153134219 153134424 + 1.05908390183068 NA intron (NM_008485, intron 16 of 23) intron (NM_008485, intron 16 of 23) 52126 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-41 chr9 57943130 57943384 + 1.05908390183068 NA intron (NM_011352, intron 1 of 13) intron (NM_011352, intron 1 of 13) 3122 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding common_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068 chr1 88361807 88362016 + 1.05908390183068 NA exon (NM_134252, exon 21 of 27) exon (NM_134252, exon 21 of 27) -45099 NM_029269 75396 Mm.173058 NM_029269 ENSMUSG00000026295 Spp2 0610038O04Rik|pp-24|spp24 secreted phosphoprotein 2 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-10 chr11 61641286 61641540 + 1.05908390183068 NA Intergenic PB1D9|SINE|Alu -11908 NM_027817 71520 Mm.202760 NM_027817 ENSMUSG00000004837 Grap 8430435N19Rik|BB233594 GRB2-related adaptor protein protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-19 chr17 5805222 5805430 + 1.05908390183068 NA Intergenic Intergenic 5836 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-2 chr11 3265189 3265478 + 1.05908390183068 NA intron (NM_007879, intron 1 of 8) B1_Mur2|SINE|Alu 1130 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|DRG-1|NEDD-3|Nedd3 developmentally regulated GTP binding protein 1 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-21 chr18 80058172 80058402 + 1.05908390183068 NA intron (NM_053117, intron 1 of 2) intron (NM_053117, intron 1 of 2) 11392 NM_053117 93737 Mm.24678 NM_053117 ENSMUSG00000056214 Pard6g 2410049N21Rik|Par6a par-6 family cell polarity regulator gamma protein-coding unique_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-3 chr2 154568734 154568926 + 1.05908390183068 NA intron (NM_007891, intron 1 of 6) intron (NM_007891, intron 1 of 6) 596 NM_001291105 13555 Mm.18036 NM_007891 ENSMUSG00000027490 E2f1 E2F-1|Tg(Wnt1-cre)2Sor|mKIAA4009 E2F transcription factor 1 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-35 chr5 135063815 135064014 + 1.05908390183068 NA promoter-TSS (NM_025362) promoter-TSS (NM_025362) -292 NM_025362 66114 Mm.178012 NM_025362 ENSMUSG00000061118 Dnajc30 1300007M11Rik|Wbscr18 DnaJ heat shock protein family (Hsp40) member C30 protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068 chr1 160060786 160060999 + 1.05908390183068 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 16512 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068 chr19 34640350 34640577 + 1.05908390183068 NA promoter-TSS (NM_008331) promoter-TSS (NM_008331) 280 NM_053217 112419 Mm.440727 NM_053217 ENSMUSG00000067297 Ifit1bl2 2010002M12Rik|AW412491|Ifit1b interferon induced protein with tetratricopeptide repeats 1B like 2 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-15 chr6 145914540 145914772 + 1.05908390183068 NA Intergenic Intergenic -17217 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-6 chr10 86159408 86159620 + 1.05908390183068 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 63660 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-24 chr9 108683869 108684134 + 1.05908390183068 NA 3' UTR (NM_020520, exon 9 of 9) 3' UTR (NM_020520, exon 9 of 9) -8142 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-25 chr2 84491938 84492131 + 1.05908390183068 NA Intergenic Intergenic 14839 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-10 chr4 81061666 81061939 + 1.05908390183068 NA Intergenic Intergenic 151116 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-8 chr2 72369292 72369573 + 1.05908390183068 NA intron (NM_023057, intron 5 of 19) intron (NM_023057, intron 5 of 19) 83731 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-29 chr4 64140598 64140815 + 1.05908390183068 NA Intergenic Intergenic -93691 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-15 chr13 43303200 43303389 + 1.05908390183068 NA exon (NM_001033399, exon 1 of 2) exon (NM_001033399, exon 1 of 2) 878 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-32 chr4 148590889 148591095 + 1.05908390183068 NA promoter-TSS (NM_009272) promoter-TSS (NM_009272) -521 NM_009272 20810 Mm.10 NM_009272 ENSMUSG00000006442 Srm AA407669|SpdST|SpdSy spermidine synthase protein-coding common_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068 chr12 70025725 70025921 + 1.05908390183068 NA intron (NM_001081453, intron 25 of 28) intron (NM_001081453, intron 25 of 28) -38821 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-8 chr17 45754472 45754718 + 1.05908390183068 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 20089 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-42 chr9 65553170 65553472 + 1.05908390183068 NA 3' UTR (NM_153119, exon 6 of 6) 3' UTR (NM_153119, exon 6 of 6) 26766 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-12 chr11 103144267 103144459 + 1.05908390183068 NA Intergenic Intergenic 11004 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-2 chr10 87773524 87773723 + 1.05908390183068 NA Intergenic Intergenic -84642 NM_001314010 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-11 chr8 69874791 69875005 + 1.05908390183068 NA Intergenic Intergenic 12494 NM_026818 68709 Mm.334584 NM_026818 ENSMUSG00000044006 Cilp2 1110031K21Rik|AA407300|CLIP-2 cartilage intermediate layer protein 2 protein-coding common_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-5 chrX 104482510 104482724 + 1.05908390183068 NA promoter-TSS (NM_001081189) promoter-TSS (NM_001081189) -165 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-5 chr10 80044271 80044493 + 1.05908390183068 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -2784 NR_110342 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-18 chr15 77734035 77734227 + 1.05908390183068 NA intron (NM_001168660, intron 1 of 2) intron (NM_001168660, intron 1 of 2) 5010 NM_001168660 71898 Mm.422856 NM_173743 ENSMUSG00000068246 Apol9b 2310016F22Rik apolipoprotein L 9b protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-22 chr9 14675961 14676187 + 1.05908390183068 NA Intergenic Intergenic 13052 NR_152172 665374 Mm.387249 NR_152172 ENSMUSG00000111085 Gm7607 EG665374 predicted gene 7607 ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-3 chr11 96972659 96972878 + 1.05908390183068 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 4920 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-39 chr8 110833736 110833938 + 1.05908390183068 NA exon (NM_133953, exon 10 of 26) exon (NM_133953, exon 10 of 26) 4761 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA unique_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-3 chr4 117202435 117202683 + 1.05908390183068 NA Intergenic U5|snRNA|snRNA -19935 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-23 chr19 42000868 42001098 + 1.05908390183068 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 19220 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-19 chr8 12762498 12762770 + 1.05908390183068 NA intron (NM_015804, intron 1 of 28) GA-rich|Low_complexity|Low_complexity 5618 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-11 chr11 94930022 94930345 + 1.05908390183068 NA Intergenic Intergenic -6041 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-10 chr6 28643873 28644154 + 1.05908390183068 NA intron (NM_019776, intron 11 of 23) intron (NM_019776, intron 11 of 23) 163665 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-37 chr7 79881556 79881814 + 1.05908390183068 NA intron (NM_009682, intron 5 of 5) B1_Mur4|SINE|Alu -33475 NM_008486 16790 Mm.4487 NM_008486 ENSMUSG00000039062 Anpep AP-M|AP-N|Apn|Cd13|P150 alanyl (membrane) aminopeptidase protein-coding unique_peak1_7_9_-0.584833071096322_3.0295115593392_1.05908390183068 chr1 153698405 153698629 + 1.05908390183068 NA TTS (NM_001347115) TTS (NM_001347115) 32844 NM_001347115 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding unique_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-4 chr8 121567905 121568116 + 1.05908390183068 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 10796 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-20 chr17 45754732 45754956 + 1.05908390183068 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 20338 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-3 chr10 79538700 79538922 + 1.05908390183068 NA Intergenic Intergenic -5024 NM_001302389 50784 Mm.28873 NM_015817 ENSMUSG00000052151 Plpp2 Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c phospholipid phosphatase 2 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-9 chr11 52167834 52168040 + 1.05908390183068 NA Intergenic CpG -10030 NR_034155 257871 Mm.253576 NR_034155 Olfr1372-ps1 GA_x5J8B7TR6JS-3-632|MOR256-54P|NP_TR6JSE50FPA olfactory receptor 1372, pseudogene 1 pseudo unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-17 chr15 10792088 10792315 + 1.05908390183068 NA Intergenic Intergenic -36850 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068 chr11 91831042 91831248 + 1.05908390183068 NA Intergenic Intergenic -253590 NM_028547 73470 Mm.67677 NM_028547 ENSMUSG00000046755 Kif2b 1700063D03Rik kinesin family member 2B protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-34 chr5 21639860 21640127 + 1.05908390183068 NA intron (NM_001199632, intron 1 of 20) PB1|SINE|Alu 5612 NM_001199632 320118 Mm.442295 NM_177076 ENSMUSG00000048520 Fbxl13 4921539K22Rik F-box and leucine-rich repeat protein 13 protein-coding common_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068 chr10 7143872 7144083 + 1.05908390183068 NA intron (NM_172546, intron 4 of 12) intron (NM_172546, intron 4 of 12) 68260 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-9 chr2 109710576 109710808 + 1.05908390183068 NA intron (NM_001285421, intron 1 of 1) intron (NM_001285421, intron 1 of 1) 1309 NM_001285421 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-7 chr19 46624619 46624876 + 1.05908390183068 NA intron (NM_001177813, intron 1 of 3) intron (NM_001177813, intron 1 of 3) 1346 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-3 chr16 33250771 33250981 + 1.05908390183068 NA promoter-TSS (NM_080557) promoter-TSS (NM_080557) -580 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-6 chr15 13257534 13257758 + 1.05908390183068 NA Intergenic Intergenic -83971 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-16 chr7 28933999 28934202 + 1.05908390183068 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 28232 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-14 chr12 32099426 32099620 + 1.05908390183068 NA Intergenic Intergenic -38244 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068 chr1 134278210 134278397 + 1.05908390183068 NA Intergenic Intergenic -11701 NM_031189 17928 Mm.16528 NM_031189 ENSMUSG00000026459 Myog MYF4|bHLHc3|myo myogenin protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-2 chr12 79544165 79544375 + 1.05908390183068 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 246919 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-2 chr11 98964329 98964535 + 1.05908390183068 NA promoter-TSS (NM_001361954) promoter-TSS (NM_001361954) -440 NM_001361954 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-2 chr11 62185276 62185466 + 1.05908390183068 NA intron (NM_001029936, intron 10 of 12) L2c|LINE|L2 -63613 NM_007413 11541 Mm.40740 NM_007413 ENSMUSG00000018500 Adora2b A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384 adenosine A2b receptor protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-40 chr9 32701167 32701356 + 1.05908390183068 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 5219 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-12 chr4 154024711 154024976 + 1.05908390183068 NA intron (NM_001163721, intron 2 of 3) intron (NM_001163721, intron 2 of 3) 1201 NM_001163722 68859 Mm.477488 NM_001033144 ENSMUSG00000078350 Smim1 0610011H04Rik|1190007F08Rik|2700009I11Rik small integral membrane protein 1 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-13 chr9 65018242 65018543 + 1.05908390183068 NA intron (NM_021345, intron 1 of 10) intron (NM_021345, intron 1 of 10) 3325 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-4 chr15 76010094 76010304 + 1.05908390183068 NA promoter-TSS (NM_001168253) promoter-TSS (NM_001168253) -701 NM_001168253 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-43 chrX 166479244 166479442 + 1.05908390183068 NA intron (NM_019773, intron 1 of 2) intron (NM_019773, intron 1 of 2) 524 NM_019773 56382 Mm.25306 NM_019773 ENSMUSG00000079316 Rab9 2410064E05Rik|AI195561|Rab9a|Sid6061p RAB9, member RAS oncogene family protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-7 chr17 27074884 27075114 + 1.05908390183068 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) -16246 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-13 chr11 107547117 107547345 + 1.05908390183068 NA promoter-TSS (NM_198298) promoter-TSS (NM_198298) -729 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-4 chr6 97869381 97869572 + 1.05908390183068 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) -60341 NM_001178049 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-4 chr14 18778769 18779010 + 1.05908390183068 NA intron (NM_001360327, intron 3 of 5) intron (NM_001360327, intron 3 of 5) 114524 NM_001360328 218793 Mm.23551 NM_144839 ENSMUSG00000058317 Ube2e2 BC016265 ubiquitin-conjugating enzyme E2E 2 protein-coding common_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-3 chr11 120713971 120714227 + 1.05908390183068 NA promoter-TSS (NM_016665) promoter-TSS (NM_016665) 146 NM_153545 217366 Mm.347545 NM_153545 ENSMUSG00000025145 Lrrc45 BC023296 leucine rich repeat containing 45 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-11 chr4 107181907 107182172 + 1.05908390183068 NA intron (NM_029565, intron 1 of 7) MT2B|LTR|ERVL 3409 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-12 chr8 69937164 69937462 + 1.05908390183068 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) -34755 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-3 chr13 75752883 75753123 + 1.05908390183068 NA intron (NM_138953, intron 4 of 11) intron (NM_138953, intron 4 of 11) 45519 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-3 chr11 106135289 106135511 + 1.05908390183068 NA intron (NM_011947, intron 6 of 15) intron (NM_011947, intron 6 of 15) 24527 NM_001356459 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-30 chr4 129985231 129985436 + 1.05908390183068 NA intron (NM_001199696, intron 1 of 28) CpG 255 NM_173071 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding unique_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-4 chr5 142920372 142920588 + 1.05908390183068 NA Intergenic Intergenic -13726 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-22 chr19 16318817 16319165 + 1.05908390183068 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -3987 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068 chr1 120083286 120083486 + 1.05908390183068 NA Intergenic Intergenic -9606 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-18 chr8 11182966 11183202 + 1.05908390183068 NA Intergenic ID_B1|SINE|B4 -129721 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-23 chr9 40100018 40100224 + 1.05908390183068 NA TTS (NM_146608) TTS (NM_146608) 1367 NM_146608 258601 Mm.377587 NM_146608 ENSMUSG00000045812 Olfr984 MOR239-6 olfactory receptor 984 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-36 chr7 68153608 68153817 + 1.05908390183068 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 110521 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-4 chr2 52423338 52423542 + 1.05908390183068 NA intron (NM_182994, intron 1 of 5) intron (NM_182994, intron 1 of 5) 1434 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding unique_peak1_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-2 chr16 45845732 45845940 + 1.05908390183068 NA Intergenic Intergenic -1085 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-15 chrX 96117530 96117746 + 1.05908390183068 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 21593 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-4 chr10 17351473 17351888 + 1.05908390183068 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -255898 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_7_9_-0.584833071096322_3.0295115593392_1.05908390183068-14 chr6 38254320 38254538 + 1.05908390183068 NA promoter-TSS (NM_194061) promoter-TSS (NM_194061) -420 NM_194061 330286 Mm.277163 NM_194061 ENSMUSG00000063455 D630045J12Rik Kiaa1549|mKIAA1549 RIKEN cDNA D630045J12 gene protein-coding common_peak1_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-2 chr10 12803689 12803876 + 1.05908390183068 NA intron (NM_011682, intron 1 of 73) RSINE1|SINE|B4 57953 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-26 chr2 102552489 102552709 + 1.05908390183068 NA intron (NM_173749, intron 1 of 10) intron (NM_173749, intron 1 of 10) 2578 NM_173749 210622 Mm.28649 NM_173749 ENSMUSG00000027188 Pamr1 5930437L24|E430002G05Rik|Ramp peptidase domain containing associated with muscle regeneration 1 protein-coding common_peak2_10_7_0.193285361743549_3.09664268087177_1.05908390183068-6 chr4 149571476 149571687 + 1.05908390183068 NA Intergenic Intergenic -14887 NM_001290989 65945 Mm.38993 NM_023051 ENSMUSG00000039953 Clstn1 1810034E21Rik|Cst-1|Cstn1 calsyntenin 1 protein-coding unique_peak1_10_7_0.193285361743549_3.09664268087177_1.05908390183068-31 chr4 137475558 137475776 + 1.05908390183068 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 6864 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak2_8_9_-0.416106887068169_3.11387465135328_1.05908390183068-9 chr5 5379620 5379863 + 1.05908390183068 NA intron (NM_011074, intron 1 of 14) intron (NM_011074, intron 1 of 14) 510 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding unique_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-2 chr17 24035486 24036279 + 1.05900946252385 NA Intergenic Intergenic -2361 NM_175440 213171 Mm.133083 NM_175440 ENSMUSG00000050762 Prss27 CAPH2|Mpn|marapsin protease, serine 27 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-9 chr7 100926932 100927504 + 1.05900946252385 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 4943 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-13 chr9 116153986 116154321 + 1.05900946252385 NA intron (NM_029575, intron 1 of 6) intron (NM_029575, intron 1 of 6) 21210 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding unique_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385 chr1 86439733 86440250 + 1.05900946252385 NA Intergenic Intergenic 13662 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-10 chr4 137477413 137477961 + 1.05900946252385 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 8884 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-3 chr17 43306447 43307055 + 1.05900946252385 NA intron (NM_133776, intron 10 of 15) intron (NM_133776, intron 10 of 15) 36404 NM_133776 77596 Mm.159950 NM_133776 ENSMUSG00000041293 Adgrf1 5031409J19Rik|Gpr110|KPG_009 adhesion G protein-coupled receptor F1 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-9 chr17 79743610 79744087 + 1.05900946252385 NA Intergenic Intergenic -28807 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385 chr1 132206054 132206885 + 1.05900946252385 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) 8381 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA unique_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-2 chr17 10319492 10319753 + 1.05900946252385 NA promoter-TSS (NM_001159517) promoter-TSS (NM_001159517) -261 NM_001159517 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding unique_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-4 chr2 84636143 84636712 + 1.05900946252385 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 13053 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-8 chr4 149571424 149572120 + 1.05900946252385 NA Intergenic Intergenic -14696 NM_001290989 65945 Mm.38993 NM_023051 ENSMUSG00000039953 Clstn1 1810034E21Rik|Cst-1|Cstn1 calsyntenin 1 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-8 chr17 70853970 70854505 + 1.05900946252385 NA promoter-TSS (NM_001164074) promoter-TSS (NM_001164074) -705 NM_001164074 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-2 chr5 36382452 36382918 + 1.05900946252385 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 15454 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385 chr1 31157741 31158324 + 1.05900946252385 NA intron (NR_033445, intron 2 of 2) intron (NR_033445, intron 2 of 2) -18403 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding unique_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-3 chr19 46524306 46524655 + 1.05900946252385 NA Intergenic Intergenic 22832 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-4 chr13 67375142 67375707 + 1.05900946252385 NA intron (NM_001001186, intron 1 of 3) intron (NM_001001186, intron 1 of 3) 339 NM_001001186 408065 Mm.461583 NM_001001186 ENSMUSG00000078995 Zfp456 BC065418|Rslcan-13 zinc finger protein 456 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-3 chr11 57800970 57801459 + 1.05900946252385 NA promoter-TSS (NM_001081168) promoter-TSS (NM_001081168) 253 NR_131042 76516 Mm.28485 NR_131042 ENSMUSG00000087165 2010001A14Rik - RIKEN cDNA 2010001A14 gene ncRNA common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-5 chr15 38384353 38384672 + 1.05900946252385 NA Intergenic Intergenic -83801 NM_001289471 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding unique_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-5 chr3 60602462 60603163 + 1.05900946252385 NA intron (NM_001253711, intron 2 of 7) intron (NM_001253711, intron 2 of 7) 101633 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-11 chr4 64044488 64044999 + 1.05900946252385 NA intron (NM_011607, intron 1 of 25) intron (NM_011607, intron 1 of 25) 2272 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-4 chr2 167825339 167826149 + 1.05900946252385 NA Intergenic Intergenic -106583 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-4 chr11 115958932 115959454 + 1.05900946252385 NA intron (NM_020483, intron 5 of 10) intron (NM_020483, intron 5 of 10) -15532 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-9 chr3 80974711 80975380 + 1.05900946252385 NA Intergenic Intergenic -61371 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-2 chr11 31157414 31157768 + 1.05900946252385 NA Intergenic Intergenic -171226 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-5 chr13 70599349 70600070 + 1.05900946252385 NA intron (NM_144837, intron 14 of 18) intron (NM_144837, intron 14 of 18) 26468 NR_045934 73584 Mm.442491 NR_045934 ENSMUSG00000101051 1700100L14Rik - RIKEN cDNA 1700100L14 gene ncRNA common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-12 chr8 24568142 24568588 + 1.05900946252385 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 7968 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-7 chr2 32587839 32588324 + 1.05900946252385 NA intron (NM_011373, intron 1 of 4) intron (NM_011373, intron 1 of 4) 1003 NM_011373 20448 Mm.27446 NM_011373 ENSMUSG00000079442 St6galnac4 SIAT7-D|ST6GalNAcIV|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385 chr1 134096868 134097347 + 1.05900946252385 NA Intergenic Intergenic -14135 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-7 chr18 62922429 62923061 + 1.05900946252385 NA intron (NM_133237, intron 1 of 4) CpG 418 NM_133237 494504 Mm.391102 NM_133237 ENSMUSG00000071847 Apcdd1 AB023957|AU041258|Drapc1|EIG180 adenomatosis polyposis coli down-regulated 1 protein-coding common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-2 chr12 8545548 8546150 + 1.05900946252385 NA intron (NM_177802, intron 2 of 6) intron (NM_177802, intron 2 of 6) -6283 NM_001286385 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-7 chr16 87267473 87268029 + 1.05900946252385 NA Intergenic MER20|DNA|hAT-Charlie -86434 NM_001159331 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-2 chr10 80917806 80918413 + 1.05900946252385 NA exon (NM_010722, exon 1 of 12) exon (NM_010722, exon 1 of 12) 136 NM_010722 16907 Mm.7362 NM_010722 ENSMUSG00000062075 Lmnb2 - lamin B2 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-5 chr3 87907738 87908069 + 1.05900946252385 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 1053 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-3 chr13 49706300 49706659 + 1.05900946252385 NA intron (NM_172015, intron 13 of 33) intron (NM_172015, intron 13 of 33) 24349 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-4 chr11 97744312 97744675 + 1.05900946252385 NA promoter-TSS (NR_106180) promoter-TSS (NR_106180) 211 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-6 chr16 62874452 62874817 + 1.05900946252385 NA intron (NM_011173, intron 1 of 14) intron (NM_011173, intron 1 of 14) 20327 NM_011173 19128 Mm.127156 NM_011173 ENSMUSG00000022912 Pros1 AW214361 protein S (alpha) protein-coding common_peak2_36_18_0.683033227613857_4.58944412725051_1.05900946252385-2 chr2 35257361 35257564 + 1.05900946252385 NA intron (NM_001206368, intron 1 of 16) intron (NM_001206368, intron 1 of 16) 1103 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-3 chr14 76533541 76533976 + 1.05900946252385 NA intron (NM_001360048, intron 2 of 2) intron (NM_001360048, intron 2 of 2) -12903 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-10 chr19 59879033 59879334 + 1.05900946252385 NA Intergenic Intergenic 64181 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-6 chr17 5820482 5821156 + 1.05900946252385 NA Intergenic Intergenic -20561 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-4 chr18 60481364 60481837 + 1.05900946252385 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 20383 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak2_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-5 chr14 28983620 28984176 + 1.05900946252385 NA intron (NM_009785, intron 27 of 37) intron (NM_009785, intron 27 of 37) -34310 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-2 chr13 67359957 67360479 + 1.05900946252385 NA intron (NM_001038651, intron 1 of 3) intron (NM_001038651, intron 1 of 3) 354 NM_001038651 629016 Mm.440800 NM_001038651 ENSMUSG00000098905 Zfp953 E130120F12Rik zinc finger protein 953 protein-coding common_peak1_21_31_-0.813769617829696_4.59311519108515_1.05900946252385 chr15 39046737 39047143 + 1.05900946252385 NA Intergenic Intergenic -29992 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385 chr1 137898718 137899240 + 1.05900946252385 NA Intergenic Intergenic -67476 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak1_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-3 chr9 61914763 61915101 + 1.05900946252385 NA promoter-TSS (NM_018853) promoter-TSS (NM_018853) -422 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-7 chr4 122835870 122836433 + 1.05900946252385 NA promoter-TSS (NM_008917) promoter-TSS (NM_008917) -76 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding common_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-6 chr3 151445626 151445984 + 1.05900946252385 NA intron (NM_133222, intron 2 of 15) (CAAAA)n|Simple_repeat|Simple_repeat 7923 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-8 chr2 30473685 30474147 + 1.05900946252385 NA exon (NM_030244, exon 1 of 1) exon (NM_030244, exon 1 of 1) 283 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_36_18_0.683033227613857_4.58944412725051_1.05900946252385 chr15 13246247 13246626 + 1.05900946252385 NA Intergenic Intergenic -72761 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-6 chr19 60940502 60940808 + 1.05900946252385 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 50906 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385-6 chr9 47529854 47530126 + 1.05900946252385 NA promoter-TSS (NM_001310841) promoter-TSS (NM_001310841) -180 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_21_31_-0.813769617829696_4.59311519108515_1.05900946252385-4 chr9 109832688 109833143 + 1.05900946252385 NA intron (NM_018757, intron 1 of 6) intron (NM_018757, intron 1 of 6) 121 NM_018757 54369 Mm.12951 NM_018757 ENSMUSG00000032478 Nme6 nm23-M6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding unique_peak1_36_18_0.683033227613857_4.58944412725051_1.05900946252385 chr13 21782612 21783032 + 1.05900946252385 NA TTS (NM_178207) TTS (NM_178207) 575 NM_178207 319153 Mm.390558 NM_178207 ENSMUSG00000101972 Hist1h3i H3-H histone cluster 1, H3i protein-coding unique_peak1_37_18_0.721235941101562_4.60854548399437_1.05900946252385-3 chr11 61494674 61495177 + 1.05900946252385 NA promoter-TSS (NM_001291035) promoter-TSS (NM_001291035) -659 NM_001291034 23939 Mm.38172 NM_011841 ENSMUSG00000001034 Mapk7 BMK-1|BMK1|ERK-5|ERK5|Erk5-T|PRKM7|b2b2346Clo mitogen-activated protein kinase 7 protein-coding common_peak2_218_215_-0.276691443943331_7.6165417801918_1.05857528690407 chr11 75461677 75462991 + 1.05857528690407 NA intron (NR_030711, intron 1 of 2) intron (NR_030711, intron 1 of 2) 795 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak1_89_53_0.449425665689871_5.9796003350084_1.05853523251719 chr13 55486920 55487977 + 1.05853523251719 NA intron (NM_001177371, intron 1 of 14) CpG 628 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding common_peak1_89_53_0.449425665689871_5.9796003350084_1.05853523251719-3 chr8 35916233 35916855 + 1.05853523251719 NA Intergenic Intergenic -33587 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak1_89_53_0.449425665689871_5.9796003350084_1.05853523251719-2 chr7 68181413 68182383 + 1.05853523251719 NA intron (NM_010513, intron 5 of 20) intron (NM_010513, intron 5 of 20) 82335 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak2_54_29_0.59194170574242_5.20286144847973_1.05820747366651-2 chr14 57298111 57298510 + 1.05820747366651 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 100173 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_54_29_0.59194170574242_5.20286144847973_1.05820747366651-4 chr3 109164227 109164546 + 1.05820747366651 NA intron (NM_172685, intron 9 of 9) intron (NM_172685, intron 9 of 9) 41237 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_34_45_-0.672205963511209_5.18745897430141_1.05820747366651-3 chr4 109280281 109280974 + 1.05820747366651 NA intron (NM_007943, intron 1 of 24) CpG 352 NM_007943 13858 Mm.318250 NM_007943 ENSMUSG00000028552 Eps15 2410112D09Rik epidermal growth factor receptor pathway substrate 15 protein-coding common_peak1_54_29_0.59194170574242_5.20286144847973_1.05820747366651-2 chr14 57298114 57298496 + 1.05820747366651 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 100178 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_34_45_-0.672205963511209_5.18745897430141_1.05820747366651-4 chr6 34709044 34709712 + 1.05820747366651 NA promoter-TSS (NM_145575) promoter-TSS (NM_145575) -66 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_54_29_0.59194170574242_5.20286144847973_1.05820747366651 chr10 86021961 86022440 + 1.05820747366651 NA promoter-TSS (NM_001310745) promoter-TSS (NM_001310745) 46 NM_001347151 69754 Mm.44236 NM_153195 ENSMUSG00000001786 Fbxo7 2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118 F-box protein 7 protein-coding unique_peak1_54_29_0.59194170574242_5.20286144847973_1.05820747366651-2 chr6 82652524 82653389 + 1.05820747366651 NA promoter-TSS (NM_025882) promoter-TSS (NM_025882) -91 NM_025882 66979 Mm.195753 NM_025882 ENSMUSG00000030042 Pole4 2400007P05Rik|5830430F06Rik polymerase (DNA-directed), epsilon 4 (p12 subunit) protein-coding unique_peak1_54_29_0.59194170574242_5.20286144847973_1.05820747366651 chr4 121097699 121098548 + 1.05820747366651 NA 5' UTR (NM_172700, exon 1 of 10) 5' UTR (NM_172700, exon 1 of 10) 120 NM_172700 230709 Mm.34399 NM_172700 ENSMUSG00000043207 Zmpste24 A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p zinc metallopeptidase, STE24 protein-coding common_peak1_54_29_0.59194170574242_5.20286144847973_1.05820747366651-4 chr9 69473109 69473852 + 1.05820747366651 NA intron (NM_007585, intron 3 of 12) B3A|SINE|B2 16536 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak2_54_29_0.59194170574242_5.20286144847973_1.05820747366651-3 chr3 95732573 95733221 + 1.05820747366651 NA Intergenic Intergenic 2076 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA common_peak1_54_29_0.59194170574242_5.20286144847973_1.05820747366651-3 chr14 78536261 78536747 + 1.05820747366651 NA intron (NM_001164503, intron 1 of 11) CpG 356 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak2_34_45_-0.672205963511209_5.18745897430141_1.05820747366651-2 chr15 76538877 76539314 + 1.05820747366651 NA promoter-TSS (NM_013909) promoter-TSS (NM_013909) 152 NM_029643 52710 Mm.28597 NM_029643 ENSMUSG00000022560 Slc52a2 2010003P03Rik|D15Ertd747e|GPCR42|Gpr172b|PAR2|mRFT1 solute carrier protein 52, member 2 protein-coding common_peak2_34_45_-0.672205963511209_5.18745897430141_1.05820747366651 chr11 120316386 120316828 + 1.05820747366651 NA Intergenic Intergenic 30806 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak2_54_29_0.59194170574242_5.20286144847973_1.05820747366651-5 chr4 59336960 59337466 + 1.05820747366651 NA intron (NM_001163288, intron 12 of 16) intron (NM_001163288, intron 12 of 16) 77162 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak1_54_29_0.59194170574242_5.20286144847973_1.05820747366651 chr1 34123770 34124534 + 1.05820747366651 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 6793 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak1_212_140_0.298850011962148_7.28897635837987_1.05794182268669 chr10 80101371 80103556 + 1.05794182268669 NA intron (NM_001359637, intron 1 of 3) CpG 239 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_378_355_-0.211852766547137_8.36980704769283_1.05744472219274 chr15 12320740 12323764 + 1.05744472219274 NA intron (NM_025673, intron 1 of 3) CpG 756 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_86_95_-0.429213877116435_6.37035556216294_1.05715192273054 chr4 155943882 155944502 + 1.05715192273054 NA promoter-TSS (NM_001284312) promoter-TSS (NM_001284312) 34 NM_001284312 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak1_155_99_0.348407627761356_6.8180600036554_1.05625859497503 chr11 5851316 5852470 + 1.05625859497503 NA Intergenic Intergenic -9973 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-2 chr16 31601806 31602317 + 1.05601013496724 NA Intergenic Intergenic -16072 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-4 chr2 117909936 117910194 + 1.05601013496724 NA TTS (NR_040631) TTS (NR_040631) 88137 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_17_27_-0.908588693811655_4.35306057515178_1.05601013496724 chr11 35838532 35838754 + 1.05601013496724 NA TTS (NM_170779) TTS (NM_170779) -4115 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-3 chr15 8442060 8442505 + 1.05601013496724 NA intron (NM_201232, intron 1 of 45) intron (NM_201232, intron 1 of 45) 2181 NM_027707 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-8 chr5 34536242 34536815 + 1.05601013496724 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -6837 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-13 chr8 121850779 121851065 + 1.05601013496724 NA Intergenic Intergenic -21353 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-3 chr2 25223665 25224092 + 1.05601013496724 NA intron (NM_146116, intron 3 of 3) intron (NM_146116, intron 3 of 3) 824 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-4 chr16 30956632 30956974 + 1.05601013496724 NA 3' UTR (NM_198626, exon 4 of 4) 3' UTR (NM_198626, exon 4 of 4) 124629 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-3 chr17 81579716 81580183 + 1.05601013496724 NA intron (NR_104580, intron 2 of 8) intron (NR_104580, intron 2 of 8) 158438 NM_001286684 20541 Mm.265834 NM_011406 ENSMUSG00000054640 Slc8a1 AI852629|AV344025|D930008O12Rik|Ncx1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724 chr14 31668686 31669048 + 1.05601013496724 NA TTS (NM_025295) TTS (NM_025295) 27810 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-12 chr8 104387206 104387709 + 1.05601013496724 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 8350 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-7 chr3 103986632 103987258 + 1.05601013496724 NA intron (NM_001163469, intron 6 of 17) intron (NM_001163469, intron 6 of 17) -18629 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724 chr11 116624497 116624749 + 1.05601013496724 NA promoter-TSS (NM_001167680) promoter-TSS (NM_001167680) -371 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-6 chr6 43247168 43247369 + 1.05601013496724 NA Intergenic Intergenic 11658 NM_146370 18346 Mm.222840 NM_146370 ENSMUSG00000061210 Olfr47 IB12|MOR261-9|Olfr13 olfactory receptor 47 protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-9 chr8 36174927 36175328 + 1.05601013496724 NA Intergenic Intergenic 19117 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-8 chr4 128993471 128993911 + 1.05601013496724 NA intron (NM_016895, intron 1 of 6) intron (NM_016895, intron 1 of 6) 467 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-2 chr14 118705677 118705968 + 1.05601013496724 NA intron (NM_001163676, intron 1 of 29) CpG 397 NM_001163676 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-5 chr4 84114512 84114851 + 1.05601013496724 NA Intergenic Intergenic -69802 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724 chr11 43852691 43853112 + 1.05601013496724 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) -16412 NM_007416 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-10 chr7 109641584 109642007 + 1.05601013496724 NA Intergenic Intergenic -24648 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-5 chr17 80756813 80757161 + 1.05601013496724 NA Intergenic Intergenic -28962 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-4 chr2 131503727 131504292 + 1.05601013496724 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 12147 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-2 chr19 6276172 6276430 + 1.05601013496724 NA promoter-TSS (NM_010119) promoter-TSS (NM_010119) -595 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-6 chr2 129819188 129819660 + 1.05601013496724 NA intron (NM_183262, intron 3 of 3) intron (NM_183262, intron 3 of 3) -17965 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA unique_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-5 chrX 103621836 103622219 + 1.05601013496724 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 1727 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-9 chr6 82115095 82115616 + 1.05601013496724 NA Intergenic Intergenic 73727 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-7 chr6 67014038 67014339 + 1.05601013496724 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -22411 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_32_15_0.767065984397759_4.38353299219888_1.05601013496724 chrX 151047227 151047530 + 1.05601013496724 NA 5' UTR (NM_008001, exon 1 of 18) 5' UTR (NM_008001, exon 1 of 18) 208 NM_008001 14163 Mm.8142 NM_008001 ENSMUSG00000025265 Fgd1 ZFYVE3 FYVE, RhoGEF and PH domain containing 1 protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-7 chr4 135883422 135883830 + 1.05601013496724 NA Intergenic Intergenic -9780 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-2 chr15 102839135 102839413 + 1.05601013496724 NA Intergenic Intergenic -81857 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding unique_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-4 chr7 91715502 91716341 + 1.05601013496724 NA intron (NM_011807, intron 2 of 22) intron (NM_011807, intron 2 of 22) -346473 NM_001243046 23859 Mm.147213 NM_011807 ENSMUSG00000052572 Dlg2 A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|Gm21505|PSD93 discs large MAGUK scaffold protein 2 protein-coding unique_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-11 chr7 113590502 113591142 + 1.05601013496724 NA Intergenic ORR1F|LTR|ERVL-MaLR -25835 NR_126544 69295 Mm.396150 NR_126544 ENSMUSG00000084984 Far1os 1700006P19Rik fatty acyl CoA reductase 1, opposite strand ncRNA common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-6 chr4 49520730 49521036 + 1.05601013496724 NA promoter-TSS (NM_001289901) promoter-TSS (NM_001289901) 200 NM_178603 28028 Mm.30052 NM_178603 ENSMUSG00000044018 Mrpl50 AA408971|AI317351|D4Wsu125e mitochondrial ribosomal protein L50 protein-coding unique_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724-3 chr5 8422174 8422585 + 1.05601013496724 NA promoter-TSS (NM_001289595) promoter-TSS (NM_001289595) 337 NM_013726 27214 Mm.292470 NM_013726 ENSMUSG00000002297 Dbf4 AA545217|Ask DBF4 zinc finger protein-coding common_peak1_32_15_0.767065984397759_4.38353299219888_1.05601013496724-5 chr2 167942581 167942973 + 1.05601013496724 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 10450 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_17_27_-0.908588693811655_4.35306057515178_1.05601013496724 chr15 85542261 85542656 + 1.05601013496724 NA intron (NM_009528, intron 3 of 3) intron (NM_009528, intron 3 of 3) 35612 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_188_123_0.31295461051417_7.11067361564396_1.05596247959579 chr5 65536401 65538297 + 1.05596247959579 NA non-coding (NR_144566, exon 1 of 6) non-coding (NR_144566, exon 1 of 6) 104 NM_001310619 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding common_peak1_194_194_-0.295409597459652_7.45962551501978_1.05582583656357 chr8 36661833 36664886 + 1.05582583656357 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -49416 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_237_159_0.27545185287673_7.45965402132573_1.05582583656357 chr19 43661990 43663987 + 1.05582583656357 NA TTS (NM_145156) TTS (NM_145156) 11893 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-31 chr7 141442550 141442828 + 1.05503135781948 NA intron (NR_153591, intron 2 of 15) intron (NR_153591, intron 2 of 15) 1336 NM_001360523 57913 Mm.334321 NM_022654 ENSMUSG00000025507 Pidd1 1200011D09Rik|AU042446|Lrdd|Pidd p53 induced death domain protein 1 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-7 chr13 40568251 40568548 + 1.05503135781948 NA Intergenic Intergenic -159409 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-3 chr1 157343211 157343431 + 1.05503135781948 NA intron (NM_177644, intron 1 of 17) B4A|SINE|B4 -69031 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-10 chr15 64385792 64386007 + 1.05503135781948 NA Intergenic Intergenic -2980 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-8 chr7 47051373 47051732 + 1.05503135781948 NA intron (NM_026436, intron 1 of 2) intron (NM_026436, intron 1 of 2) 912 NM_026436 67893 Mm.27338 NM_026436 ENSMUSG00000010307 Tmem86a 1810054O13Rik|AI414959|AW742698 transmembrane protein 86A protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-7 chr3 104239091 104239304 + 1.05503135781948 NA Intergenic Intergenic -18791 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-14 chr5 105808121 105808313 + 1.05503135781948 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -68351 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948 chr15 103008510 103008725 + 1.05503135781948 NA promoter-TSS (NM_010465) promoter-TSS (NM_010465) -945 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-27 chr6 72598054 72598255 + 1.05503135781948 NA promoter-TSS (NM_026159) promoter-TSS (NM_026159) 259 NM_144917 232089 Mm.167232 NM_144917 ENSMUSG00000056698 Elmod3 AI844780|C330008I15Rik|RBM29|Rbed1 ELMO/CED-12 domain containing 3 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-36 chrX 96105785 96105998 + 1.05503135781948 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 9846 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-5 chr16 33893080 33893276 + 1.05503135781948 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 63513 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-6 chr13 13538888 13539093 + 1.05503135781948 NA Intergenic MIRc|SINE|MIR -51419 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-13 chr4 119415208 119415462 + 1.05503135781948 NA 5' UTR (NM_001270435, exon 1 of 15) 5' UTR (NM_001270435, exon 1 of 15) 186 NM_001270435 73332 Mm.425204 NM_028506 ENSMUSG00000028637 Ccdc30 1700001O02Rik|1700041C02Rik|1700111D19Rik|4930445I03Rik coiled-coil domain containing 30 protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-7 chr2 170244420 170244623 + 1.05503135781948 NA Intergenic Intergenic -101846 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-11 chr2 117955137 117955404 + 1.05503135781948 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 133342 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-9 chr4 58197152 58197340 + 1.05503135781948 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 9350 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-13 chr5 65287176 65287423 + 1.05503135781948 NA intron (NM_011258, intron 11 of 24) intron (NM_011258, intron 11 of 24) 48340 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-2 chr13 27734906 27735168 + 1.05503135781948 NA Intergenic RMER15|LTR|ERVL -18300 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-11 chr15 90401712 90401986 + 1.05503135781948 NA Intergenic Intergenic 48139 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-11 chr9 69891558 69891758 + 1.05503135781948 NA Intergenic Intergenic -97808 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-7 chr15 84278515 84278809 + 1.05503135781948 NA intron (NM_133167, intron 3 of 12) intron (NM_133167, intron 3 of 12) -46058 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-30 chr7 70047531 70047801 + 1.05503135781948 NA Intergenic Intergenic 290156 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-9 chr3 30696997 30697511 + 1.05503135781948 NA intron (NM_001309233, intron 1 of 8) T-rich|Low_complexity|Low_complexity 2589 NM_001309233 320352 Mm.229153 NM_001309233 ENSMUSG00000074653 Lrrc31 E230002P03Rik leucine rich repeat containing 31 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-29 chr6 128842917 128843183 + 1.05503135781948 NA Intergenic CpG -16735 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-5 chr17 84180541 84180801 + 1.05503135781948 NA Intergenic Intergenic 7276 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-7 chr7 140116634 140116902 + 1.05503135781948 NA promoter-TSS (NM_053119) promoter-TSS (NM_053119) -345 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-11 chr4 59372680 59372867 + 1.05503135781948 NA intron (NM_001163288, intron 8 of 16) intron (NM_001163288, intron 8 of 16) 65860 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948 chr1 91062769 91062975 + 1.05503135781948 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 9428 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-2 chr1 44568017 44568235 + 1.05503135781948 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 16455 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-5 chr12 119237791 119238039 + 1.05503135781948 NA 5' UTR (NM_177290, exon 1 of 14) 5' UTR (NM_177290, exon 1 of 14) 361 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-12 chr4 108357063 108357263 + 1.05503135781948 NA Intergenic Intergenic 26492 NM_001099303 545667 Mm.380025 NM_001099303 ENSMUSG00000059816 Fam159a Shisal2a family with sequence similarity 159, member A protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-5 chr16 30972868 30973163 + 1.05503135781948 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 108417 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-9 chr3 145676711 145676929 + 1.05503135781948 NA Intergenic Intergenic -26835 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948 chr1 133959076 133959340 + 1.05503135781948 NA Intergenic Intergenic -37807 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-34 chr9 55938367 55938578 + 1.05503135781948 NA promoter-TSS (NM_001081341) promoter-TSS (NM_001081341) -353 NM_001081341 244891 Mm.86588 NM_175536 ENSMUSG00000034007 Scaper C430017I08|D530014O03Rik|Zfp291 S phase cyclin A-associated protein in the ER protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-21 chr5 5688026 5688251 + 1.05503135781948 NA intron (NM_028734, intron 1 of 5) B4A|SINE|B4 5951 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-13 chr9 102635333 102635570 + 1.05503135781948 NA Intergenic Intergenic 9155 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-6 chr13 97581002 97581267 + 1.05503135781948 NA intron (NR_046157, intron 2 of 2) intron (NR_046157, intron 2 of 2) 21134 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-4 chr15 13256158 13256379 + 1.05503135781948 NA Intergenic Intergenic -82593 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-10 chr2 104123036 104123227 + 1.05503135781948 NA exon (NM_026634, exon 1 of 2) exon (NM_026634, exon 1 of 2) 362 NM_026634 68243 Mm.158191 NM_026634 ENSMUSG00000032671 A930018P22Rik - RIKEN cDNA A930018P22 gene protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-10 chr4 21727384 21727584 + 1.05503135781948 NA promoter-TSS (NM_001290420) promoter-TSS (NM_001290420) -217 NM_001290422 51813 Mm.278584 NM_016746 ENSMUSG00000028252 Ccnc AI451004|AU020987|CG1C cyclin C protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948 chr1 78812037 78812272 + 1.05503135781948 NA intron (NR_151519, intron 3 of 3) intron (NR_151519, intron 3 of 3) -4757 NM_021342 57814 Mm.24386 NM_021342 ENSMUSG00000047330 Kcne4 AW487937|MiRP3 potassium voltage-gated channel, Isk-related subfamily, gene 4 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-10 chr9 63378146 63378503 + 1.05503135781948 NA promoter-TSS (NM_011840) promoter-TSS (NM_011840) -472 NM_011840 23938 Mm.325746 NM_011840 ENSMUSG00000058444 Map2k5 AI324775|AI428457|MEK5|Mapkk5|Prkmk5 mitogen-activated protein kinase kinase 5 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-32 chr8 24580940 24581146 + 1.05503135781948 NA Intergenic Intergenic -4710 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-16 chr8 85557868 85558153 + 1.05503135781948 NA Intergenic Intergenic -2739 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-8 chr4 53409946 53410168 + 1.05503135781948 NA Intergenic ID_B1|SINE|B4 -30356 NM_001159633 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-14 chr5 29772353 29772654 + 1.05503135781948 NA intron (NM_001359198, intron 8 of 8) intron (NM_001359198, intron 8 of 8) -36567 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-35 chr9 57148438 57148709 + 1.05503135781948 NA promoter-TSS (NM_001357409) promoter-TSS (NM_001357409) -268 NM_001357409 72774 Mm.35749 NM_028347 ENSMUSG00000032298 Neil1 2810450N13Rik|NEH1|Nei1 nei endonuclease VIII-like 1 (E. coli) protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-5 chr11 44066429 44066699 + 1.05503135781948 NA Intergenic Intergenic -165327 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-24 chr5 115061222 115061517 + 1.05503135781948 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 46593 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-3 chr3 135689661 135689862 + 1.05503135781948 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 1786 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-17 chr3 53138366 53138618 + 1.05503135781948 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 96945 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-3 chr13 114456320 114456543 + 1.05503135781948 NA exon (NM_001301373, exon 2 of 6) exon (NM_001301373, exon 2 of 6) 2520 NM_001301373 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-11 chrX 164975422 164975764 + 1.05503135781948 NA intron (NM_029730, intron 2 of 14) intron (NM_029730, intron 2 of 14) 4782 NM_001290523 76763 Mm.291758 NM_029730 ENSMUSG00000061778 Mospd2 2410013I23Rik motile sperm domain containing 2 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-15 chr8 22490768 22490986 + 1.05503135781948 NA intron (NM_011394, intron 1 of 10) MT2B1|LTR|ERVL -13998 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-13 chrX 20868992 20869257 + 1.05503135781948 NA intron (NM_001110780, intron 5 of 12) (TCTCTG)n|Simple_repeat|Simple_repeat -1042 NM_001044384 21857 Mm.8245 NM_011593 ENSMUSG00000001131 Timp1 Clgi|EPA|TIMP-1|TPA-S1|Timp tissue inhibitor of metalloproteinase 1 protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-3 chr11 4317793 4318029 + 1.05503135781948 NA Intergenic Intergenic 51115 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-20 chr4 137862799 137863015 + 1.05503135781948 NA intron (NM_199307, intron 1 of 19) intron (NM_199307, intron 1 of 19) 670 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-6 chr19 5815389 5815745 + 1.05503135781948 NA Intergenic MT2B|LTR|ERVL -12895 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948 chr1 132129381 132129610 + 1.05503135781948 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 10190 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-4 chr11 77685737 77685952 + 1.05503135781948 NA promoter-TSS (NM_001024205) promoter-TSS (NM_001024205) -295 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-2 chr13 41645876 41646211 + 1.05503135781948 NA Intergenic Intergenic 39827 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-10 chr8 60770552 60770776 + 1.05503135781948 NA Intergenic Intergenic 115107 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-4 chr11 5857449 5857674 + 1.05503135781948 NA Intergenic Intergenic -4305 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-8 chr2 148873956 148874197 + 1.05503135781948 NA intron (NM_009976, intron 1 of 2) intron (NM_009976, intron 1 of 2) 1436 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-15 chr19 28635643 28635868 + 1.05503135781948 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -42469 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-2 chr1 185363974 185364191 + 1.05503135781948 NA intron (NM_001357474, intron 1 of 32) intron (NM_001357474, intron 1 of 32) 1038 NM_001357474 107508 Mm.154511 NM_029735 ENSMUSG00000026615 Eprs 2410081F06Rik|3010002K18Rik|C79379|Qprs glutamyl-prolyl-tRNA synthetase protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-10 chr6 112263729 112264001 + 1.05503135781948 NA Intergenic Intergenic -9893 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-6 chr13 28311826 28312101 + 1.05503135781948 NA Intergenic Intergenic 169479 NM_023746 28078 Mm.155058 NM_023746 ENSMUSG00000017064 Prl5a1 1600013P04Rik|D13Wsu14e|Ghd24|PLP-L|Prlpl prolactin family 5, subfamily a, member 1 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-9 chr14 69487792 69487995 + 1.05503135781948 NA Intergenic Intergenic 24656 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-6 chr2 68304792 68305037 + 1.05503135781948 NA intron (NM_016866, intron 14 of 17) intron (NM_016866, intron 14 of 17) 167067 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948 chr1 12620172 12620418 + 1.05503135781948 NA Intergenic Intergenic -47268 NR_045297 329096 Mm.417782 NR_045297 ENSMUSG00000097171 Gm17644 4932411L15 predicted gene, 17644 ncRNA unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-2 chr10 24396159 24396398 + 1.05503135781948 NA Intergenic Intergenic 172761 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-6 chr3 93000202 93000431 + 1.05503135781948 NA Intergenic Intergenic 8090 NM_001018079 69520 Mm.439968 NM_001018079 ENSMUSG00000068885 Lce3f 2310002A05Rik late cornified envelope 3F protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-18 chr3 95312276 95312500 + 1.05503135781948 NA Intergenic Intergenic -2802 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-12 chr4 119115023 119115287 + 1.05503135781948 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 6410 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-6 chr2 152681350 152681578 + 1.05503135781948 NA 3' UTR (NM_001159553, exon 3 of 3) 3' UTR (NM_001159553, exon 3 of 3) -5684 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-33 chr8 126825180 126825382 + 1.05503135781948 NA Intergenic Intergenic -23739 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-22 chr5 92093148 92093371 + 1.05503135781948 NA intron (NM_001359197, intron 1 of 10) intron (NM_001359197, intron 1 of 10) -9515 NM_001080795 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-3 chr10 17352175 17352448 + 1.05503135781948 NA Intergenic Intergenic -256529 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-37 chrX 134307647 134307899 + 1.05503135781948 NA promoter-TSS (NM_145924) promoter-TSS (NM_145924) -311 NM_145924 102920 Mm.34903 NM_145924 ENSMUSG00000031262 Cenpi CENP-I|Fshprh1 centromere protein I protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-3 chr11 33147920 33148136 + 1.05503135781948 NA promoter-TSS (NR_102395) promoter-TSS (NR_102395) -628 NR_102395 14172 Mm.339812 NM_008005 ENSMUSG00000057967 Fgf18 D130055P09Rik|FGF-18 fibroblast growth factor 18 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-23 chr5 107961204 107961431 + 1.05503135781948 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 25760 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-5 chr11 103269346 103269558 + 1.05503135781948 NA Intergenic Intergenic -2051 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-8 chr13 98945331 98945658 + 1.05503135781948 NA Intergenic Intergenic -19110 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948 chr12 70587334 70587592 + 1.05503135781948 NA intron (NR_037248, intron 4 of 4) intron (NR_037248, intron 4 of 4) 134309 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-16 chr2 27826899 27827154 + 1.05503135781948 NA Intergenic Intergenic -59399 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-11 chr8 91390470 91390673 + 1.05503135781948 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 77046 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-8 chr4 52438474 52438673 + 1.05503135781948 NA promoter-TSS (NM_001301412) promoter-TSS (NM_001301412) 391 NR_045175 72648 Mm.391869 NR_045175 ENSMUSG00000085763 Smc2os 2700081L22Rik structural maintenance of chromosomes 2, opposite strand ncRNA common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-3 chr14 7853061 7853270 + 1.05503135781948 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 35208 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-9 chr13 97545820 97546038 + 1.05503135781948 NA Intergenic Intergenic -14071 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-26 chr6 31112987 31113202 + 1.05503135781948 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -50001 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-2 chr12 116293626 116293840 + 1.05503135781948 NA intron (NM_028731, intron 1 of 21) B3|SINE|B2 12511 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-12 chr16 45085182 45085520 + 1.05503135781948 NA Intergenic Intergenic -8660 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-5 chr5 29875523 29875741 + 1.05503135781948 NA Intergenic Intergenic -137482 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-12 chr9 97017193 97017421 + 1.05503135781948 NA intron (NM_145134, intron 1 of 2) intron (NM_145134, intron 1 of 2) 1048 NM_145134 211949 Mm.491271 NM_145134 ENSMUSG00000046997 Spsb4 D030068E18Rik|SSB-4|Ssb4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-28 chr6 112510473 112510734 + 1.05503135781948 NA Intergenic Intergenic -20778 NM_001081147 18430 Mm.333310 NM_001081147 ENSMUSG00000049112 Oxtr OTR oxytocin receptor protein-coding common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-6 chr6 94303298 94303515 + 1.05503135781948 NA Intergenic Intergenic -19489 NM_001286785 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-9 chr7 84544205 84544412 + 1.05503135781948 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 15354 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-19 chr4 57538245 57538455 + 1.05503135781948 NA Intergenic Intergenic -29898 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-9 chr8 70722669 70722875 + 1.05503135781948 NA TTS (NM_001195253) TTS (NM_001195253) -1292 NM_001310465 110385 Mm.255180 NM_201607 ENSMUSG00000031842 Pde4c Dpde1|E130301F19Rik|dunce phosphodiesterase 4C, cAMP specific protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-13 chr17 6108773 6109066 + 1.05503135781948 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 2089 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-4 chr10 68279649 68279861 + 1.05503135781948 NA Intergenic Intergenic -1029 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-2 chr3 121904415 121904660 + 1.05503135781948 NA Intergenic Intergenic -48692 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-2 chr1 177649425 177649670 + 1.05503135781948 NA Intergenic PB1|SINE|Alu -6604 NR_037994 75589 Mm.86666 NR_037994 ENSMUSG00000101746 2310043L19Rik - RIKEN cDNA 2310043L19 gene ncRNA common_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-4 chr4 31425888 31426113 + 1.05503135781948 NA Intergenic Intergenic -538107 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-4 chr12 98713181 98713380 + 1.05503135781948 NA intron (NM_001146199, intron 3 of 18) intron (NM_001146199, intron 3 of 18) 21365 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-25 chr5 136442588 136442794 + 1.05503135781948 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -66888 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-4 chr16 24424527 24424767 + 1.05503135781948 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -23444 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-12 chr9 6333187 6333470 + 1.05503135781948 NA exon (NM_027924, exon 4 of 7) exon (NM_027924, exon 4 of 7) -66781 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-8 chr13 45470607 45470825 + 1.05503135781948 NA Intergenic Intergenic -36728 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-4 chr14 57749794 57750017 + 1.05503135781948 NA Intergenic PB1D10|SINE|Alu -3782 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-7 chr2 167265402 167265696 + 1.05503135781948 NA Intergenic Intergenic -25012 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948 chr12 111667675 111667863 + 1.05503135781948 NA Intergenic Intergenic 4569 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-8 chr3 30595496 30595708 + 1.05503135781948 NA Intergenic CpG 4268 NM_029690 76652 Mm.116928 NM_029690 ENSMUSG00000037737 Actrt3 1700119I24Rik|ARP-T3|Arpm1 actin related protein T3 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-14 chrX 162901927 162902197 + 1.05503135781948 NA promoter-TSS (NR_033143) promoter-TSS (NR_033143) -109 NR_033143 55936 Mm.2065 NM_018737 ENSMUSG00000031360 Ctps2 A830031M15Rik|AI326475|Ctpsh cytidine 5'-triphosphate synthase 2 protein-coding common_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-7 chr13 15986765 15986966 + 1.05503135781948 NA intron (NR_155430, intron 1 of 3) intron (NR_155430, intron 1 of 3) -24986 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding unique_peak1_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-14 chr17 79822081 79822342 + 1.05503135781948 NA Intergenic Intergenic 73912 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding unique_peak2_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-5 chr13 28546345 28546545 + 1.05503135781948 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 164428 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_10_10_-0.266146256893748_3.32635849019042_1.05503135781948-3 chr14 20215603 20215822 + 1.05503135781948 NA Intergenic Intergenic -33930 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak2_11_9_-0.00399746886886732_3.31992936045293_1.05503135781948-7 chr2 68861168 68861394 + 1.05503135781948 NA promoter-TSS (NM_172856) promoter-TSS (NM_172856) -160 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_71_81_-0.472895735518623_6.12110413685877_1.05485960972521 chr5 3503233 3504045 + 1.05485960972521 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -40194 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_71_81_-0.472895735518623_6.12110413685877_1.05485960972521 chr2 153345816 153346756 + 1.05485960972521 NA promoter-TSS (NR_040318) promoter-TSS (NR_040318) 147 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak1_98_59_0.43395601144345_6.12386860133024_1.0548596097252 chr5 88720220 88721298 + 1.0548596097252 NA promoter-TSS (NM_026735) promoter-TSS (NM_026735) -112 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak2_98_59_0.43395601144345_6.12386860133024_1.0548596097252 chr11 22512221 22512998 + 1.0548596097252 NA intron (NM_153596, intron 1 of 3) CpG 326 NM_153596 103765 Mm.221274 NM_153596 ENSMUSG00000049904 Tmem17 AI503894|AW049890 transmembrane protein 17 protein-coding common_peak1_265_179_0.264859448643113_7.62428282065123_1.05472830448677 chr15 100226884 100228842 + 1.05472830448677 NA promoter-TSS (NM_007497) promoter-TSS (NM_007497) 4 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding common_peak1_106_65_0.407771917670705_6.24828007819381_1.05467374816096-2 chr7 75455602 75456285 + 1.05467374816096 NA intron (NM_029332, intron 1 of 36) CpG 409 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_106_65_0.407771917670705_6.24828007819381_1.05467374816096 chr2 39007587 39008730 + 1.05467374816096 NA promoter-TSS (NM_028809) promoter-TSS (NM_028809) 19 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding common_peak2_78_88_-0.458165764691121_6.24665054862084_1.05467374816096 chr7 98703302 98704097 + 1.05467374816096 NA promoter-TSS (NR_144495) promoter-TSS (NR_144495) 452 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_106_65_0.407771917670705_6.24828007819381_1.05467374816096 chr2 102900664 102901428 + 1.05467374816096 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 619 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_107_65_0.421097751968461_6.25494299534268_1.05467374816096 chr15 98634224 98635044 + 1.05467374816096 NA promoter-TSS (NM_001286226) promoter-TSS (NM_001286226) -133 NM_007581 12297 Mm.3544 NM_007581 ENSMUSG00000003352 Cacnb3 Beta3|CAB3|Ca(v)beta3|Cchb3 calcium channel, voltage-dependent, beta 3 subunit protein-coding common_peak2_251_169_0.269869402962645_7.54432563761902_1.05466374715375 chr6 113074874 113077205 + 1.05466374715375 NA intron (NR_027009, intron 1 of 1) intron (NR_027009, intron 1 of 1) 1205 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak1_67_38_0.517373658900959_5.54408904831273_1.05413753349255 chr1 162093676 162094240 + 1.05413753349255 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 88989 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA common_peak1_67_38_0.517373658900959_5.54408904831273_1.05413753349255-2 chr1 165302485 165303397 + 1.05413753349255 NA intron (NM_001310430, intron 1 of 5) intron (NM_001310430, intron 1 of 5) 318 NM_001310430 240888 Mm.329929 NM_001081126 ENSMUSG00000040836 Gpr161 Gm208|Gm208Gpr|vl G protein-coupled receptor 161 protein-coding unique_peak2_45_56_-0.590036712368486_5.5378716579805_1.05413753349255 chr4 139380646 139381709 + 1.05413753349255 NA intron (NM_001160319, intron 1 of 105) intron (NM_001160319, intron 1 of 105) 518 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding common_peak1_67_38_0.517373658900959_5.54408904831273_1.05413753349255-3 chr19 5743863 5744490 + 1.05413753349255 NA intron (NM_008520, intron 2 of 27) intron (NM_008520, intron 2 of 27) 3272 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak2_45_56_-0.590036712368486_5.5378716579805_1.05413753349255-2 chr5 35728550 35729656 + 1.05413753349255 NA 5' UTR (NM_194344, exon 1 of 18) 5' UTR (NM_194344, exon 1 of 18) 173 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding common_peak1_45_56_-0.590036712368486_5.5378716579805_1.05413753349255 chr1 39761404 39762065 + 1.05413753349255 NA Intergenic Intergenic -40745 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding common_peak2_45_56_-0.590036712368486_5.5378716579805_1.05413753349255 chr1 82290546 82291455 + 1.05413753349255 NA 5' UTR (NM_010570, exon 1 of 2) 5' UTR (NM_010570, exon 1 of 2) 439 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak2_67_38_0.517373658900959_5.54408904831273_1.05413753349255 chr1 74028991 74029620 + 1.05413753349255 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 95142 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_58_68_-0.509123371455489_5.85396277105042_1.05356820041554 chr6 113442407 113443212 + 1.05356820041554 NA intron (NM_001243739, intron 1 of 1) CpG 240 NM_001243739 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding common_peak1_57_68_-0.533611435400903_5.84171873907772_1.05356820041554 chr12 35736027 35737261 + 1.05356820041554 NA Intergenic Intergenic -41526 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA common_peak1_82_48_0.47361377677571_5.85151673250306_1.05356820041554 chr8 112011453 112012181 + 1.05356820041554 NA promoter-TSS (NM_001130868) promoter-TSS (NM_001130868) 458 NM_020584 57321 Mm.213064 NM_020584 ENSMUSG00000033430 Terf2ip Rap1 telomeric repeat binding factor 2, interacting protein protein-coding common_peak1_58_68_-0.509123371455489_5.85396277105042_1.05356820041554 chr19 10783065 10783625 + 1.05356820041554 NA intron (NR_027805, intron 2 of 3) intron (NR_027805, intron 2 of 3) 42398 NR_027805 403202 Mm.34482 NM_207529 ENSMUSG00000067577 A430093F15Rik Gm674 RIKEN cDNA A430093F15 gene ncRNA common_peak2_57_68_-0.533611435400903_5.84171873907772_1.05356820041554 chr6 146932299 146933226 + 1.05356820041554 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 21659 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_112_119_-0.376567893948267_6.71860664863438_1.05332953445312 chr8 116920954 116922210 + 1.05332953445312 NA promoter-TSS (NM_028131) promoter-TSS (NM_028131) -146 NM_026844 66531 Mm.4011 NM_026844 ENSMUSG00000014633 Cmc2 1110046L09Rik|2310061C15Rik|DC13 COX assembly mitochondrial protein 2 protein-coding common_peak2_145_92_0.358201644884652_6.71825963355036_1.0533295344531 chr13 28949351 28951155 + 1.0533295344531 NA 3' UTR (NM_009238, exon 1 of 1) 3' UTR (NM_009238, exon 1 of 1) 3446 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak2_94_103_-0.418674344415311_6.49110254593344_1.05325031401236-2 chr3 37938547 37939295 + 1.05325031401236 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 40108 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_94_103_-0.418674344415311_6.49110254593344_1.05325031401236 chr13 16014724 16016385 + 1.05325031401236 NA intron (NM_008380, intron 3 of 4) (A)n|Simple_repeat|Simple_repeat 3703 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_94_103_-0.418674344415311_6.49110254593344_1.05325031401236 chr17 26506356 26507614 + 1.05325031401236 NA exon (NM_013642, exon 3 of 4) exon (NM_013642, exon 3 of 4) 1487 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_279_190_0.252762225790323_7.70380994093091_1.05221169838435 chr3 51559352 51561511 + 1.05221169838435 NA intron (NR_033624, intron 1 of 4) CpG 392 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding common_peak1_135_85_0.369456143487866_6.61099282644603_1.05217849096888 chr14 30548633 30550599 + 1.05217849096888 NA intron (NM_009388, intron 1 of 13) intron (NM_009388, intron 1 of 13) 485 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding common_peak1_135_85_0.369456143487866_6.61099282644603_1.05217849096888-2 chr17 13699813 13701093 + 1.05217849096888 NA Intergenic Intergenic -60088 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak2_103_111_-0.39592670674898_6.60939156868311_1.05217849096885 chr15 99473671 99475024 + 1.05217849096885 NA intron (NM_029236, intron 1 of 1) intron (NM_029236, intron 1 of 1) 383 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding common_peak1_74_43_0.483702845742465_5.70128304150853_1.05173147685247-2 chr15 53686761 53687243 + 1.05173147685247 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -72723 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_75_43_0.502676856334605_5.7107700468046_1.05173147685247-3 chr4 22357139 22358283 + 1.05173147685247 NA intron (NM_172988, intron 1 of 8) CpG 168 NR_104380 269514 Mm.40708 NM_172988 ENSMUSG00000040410 Fbxl4 AI836810|FBL4|FBL5 F-box and leucine-rich repeat protein 4 protein-coding common_peak2_74_43_0.483702845742465_5.70128304150853_1.05173147685247-2 chr19 6045832 6046410 + 1.05173147685247 NA promoter-TSS (NM_028769) promoter-TSS (NM_028769) -455 NM_028769 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak2_74_43_0.483702845742465_5.70128304150853_1.05173147685247 chr17 47293517 47293994 + 1.05173147685247 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 63525 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_75_43_0.502676856334605_5.7107700468046_1.05173147685247-4 chr4 125066352 125067300 + 1.05173147685247 NA exon (NM_175246, exon 1 of 4) exon (NM_175246, exon 1 of 4) 154 NM_001356560 76793 Mm.22548 NM_175246 ENSMUSG00000050213 Snip1 2410133M08Rik Smad nuclear interacting protein 1 protein-coding common_peak1_75_43_0.502676856334605_5.7107700468046_1.05173147685247 chr15 66844312 66844781 + 1.05173147685247 NA intron (NM_009375, intron 45 of 47) intron (NM_009375, intron 45 of 47) -12717 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_74_43_0.483702845742465_5.70128304150853_1.05173147685247 chr14 25496819 25497608 + 1.05173147685247 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) -37226 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_74_43_0.483702845742465_5.70128304150853_1.05173147685247-3 chr6 128349709 128350142 + 1.05173147685247 NA intron (NM_011657, intron 1 of 10) intron (NM_011657, intron 1 of 10) 5926 NM_011657 22158 Mm.291783 NM_011657 ENSMUSG00000001521 Tulp3 2310022L06Rik|AI316887 tubby-like protein 3 protein-coding common_peak1_75_43_0.502676856334605_5.7107700468046_1.05173147685247-2 chr2 160872705 160873803 + 1.05173147685247 NA promoter-TSS (NM_177263) promoter-TSS (NM_177263) -264 NM_177263 320799 Mm.436734 NM_177263 ENSMUSG00000035877 Zhx3 1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395 zinc fingers and homeoboxes 3 protein-coding common_peak1_51_62_-0.558796728618048_5.69788155919089_1.05173147685246 chr10 84391899 84392481 + 1.05173147685246 NA intron (NM_001004363, intron 4 of 6) intron (NM_001004363, intron 4 of 6) 48281 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_51_62_-0.558796728618048_5.69788155919089_1.05173147685246-2 chr15 55557385 55557856 + 1.05173147685246 NA promoter-TSS (NM_026759) promoter-TSS (NM_026759) 212 NM_001168250 105837 Mm.390829 NM_134092 ENSMUSG00000022369 Mtbp AI429604|MDM2BP Mdm2, transformed 3T3 cell double minute p53 binding protein protein-coding common_peak2_51_62_-0.558796728618048_5.69788155919089_1.05173147685246-2 chr7 101836325 101836993 + 1.05173147685246 NA exon (NM_001122739, exon 2 of 29) exon (NM_001122739, exon 2 of 29) 1165 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak2_51_62_-0.558796728618048_5.69788155919089_1.05173147685246 chr11 120350259 120351222 + 1.05173147685246 NA intron (NR_038126, intron 1 of 1) intron (NR_038126, intron 1 of 1) 2062 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak1_266_180_0.262241961970934_7.63096686806867_1.05092025303376 chr15 53113064 53115627 + 1.05092025303376 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 231838 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_151_155_-0.33034872346359_7.12022785713045_1.05052824909346-2 chr6 146577553 146578959 + 1.05052824909346 NA promoter-TSS (NM_138757) promoter-TSS (NM_138757) 345 NM_026218 67529 Mm.333499 NM_026218 ENSMUSG00000040242 Fgfr1op2 1500031J01Rik FGFR1 oncogene partner 2 protein-coding common_peak1_151_155_-0.33034872346359_7.12022785713045_1.05052824909346 chr11 85233762 85235025 + 1.05052824909346 NA promoter-TSS (NR_028329) promoter-TSS (NR_028329) 727 NM_025825 66884 Mm.271997 NM_025825 ENSMUSG00000018481 Appbp2 1300003O07Rik|AI465480|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding common_peak2_201_133_0.296353729226396_7.21426605507097_1.04864105272317 chr13 75707527 75708771 + 1.04864105272317 NA intron (NM_138953, intron 1 of 11) CpG 665 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_234_229_-0.266281808034931_7.71234914692691_1.04862480756824 chr15 85668863 85670688 + 1.04862480756824 NA Intergenic Intergenic -33998 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_214_142_0.291918133038434_7.30583040329761_1.04835592061447 chr3 90079629 90080747 + 1.04835592061447 NA intron (NM_001357581, intron 1 of 8) CpG 667 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_117_72_0.402521546869417_6.39108533231473_1.04808805211775-3 chr7 79464972 79466155 + 1.04808805211775 NA intron (NM_001360095, intron 1 of 22) CpG 710 NM_001360095 18975 Mm.3616 NM_017462 ENSMUSG00000039176 Polg AA409516|PolgA polymerase (DNA directed), gamma protein-coding common_peak2_116_72_0.390329840456761_6.3849894791084_1.04808805211775-2 chr19 4169714 4170564 + 1.04808805211775 NA intron (NM_134148, intron 7 of 9) intron (NM_134148, intron 7 of 9) 5340 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding common_peak1_117_72_0.402521546869417_6.39108533231473_1.04808805211775-2 chr4 40821057 40821719 + 1.04808805211775 NA intron (NM_022305, intron 2 of 5) intron (NM_022305, intron 2 of 5) 28750 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_116_72_0.390329840456761_6.3849894791084_1.04808805211775 chr11 60141777 60142898 + 1.04808805211775 NA intron (NM_001037764, intron 1 of 4) intron (NM_001037764, intron 1 of 4) 2255 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_117_72_0.402521546869417_6.39108533231473_1.04808805211775 chr2 18766533 18767703 + 1.04808805211775 NA Intergenic CpG -6256 NR_126079 100041479 Mm.393659 NR_126079 ENSMUSG00000092353 Gm3363 - predicted gene 3363 ncRNA common_peak1_196_196_-0.295513457381701_7.47429509076553_1.04734132264954 chr3 122508823 122510762 + 1.04734132264954 NA intron (NM_013867, intron 5 of 11) intron (NM_013867, intron 5 of 11) 26223 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak1_479_339_0.192921690768449_8.50585178152193_1.04731530569638 chr19 10603331 10606589 + 1.04731530569638 NA promoter-TSS (NM_145496) promoter-TSS (NM_145496) -665 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak1_91_54_0.454438608698351_6.00857901787383_1.04668459253223-2 chr19 30255796 30257348 + 1.04668459253223 NA Intergenic Intergenic 23615 NM_010776 17195 Mm.30045 NM_010776 ENSMUSG00000024863 Mbl2 L-MBP|MBL|MBL-C|MBP-C mannose-binding lectin (protein C) 2 protein-coding common_peak2_65_75_-0.487916508619071_6.00396925913405_1.04668459253223 chr1 54925429 54926631 + 1.04668459253223 NA intron (NM_001081433, intron 1 of 27) CpG 357 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_91_54_0.454438608698351_6.00857901787383_1.04668459253223-5 chr9 108002601 108003406 + 1.04668459253223 NA intron (NM_013785, intron 1 of 5) CpG 355 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak1_65_75_-0.487916508619071_6.00396925913405_1.04668459253223-2 chr5 77383556 77384206 + 1.04668459253223 NA intron (NM_008048, intron 1 of 4) ID_B1|SINE|B4 24164 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_91_54_0.454438608698351_6.00857901787383_1.04668459253223 chr1 164249115 164250215 + 1.04668459253223 NA intron (NM_001276455, intron 1 of 5) CpG 619 NM_054087 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA|ThTr-1 solute carrier family 19 (thiamine transporter), member 2 protein-coding common_peak1_91_54_0.454438608698351_6.00857901787383_1.04668459253223-4 chr3 60408395 60409381 + 1.04668459253223 NA Intergenic Intergenic -63942 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak1_65_75_-0.487916508619071_6.00396925913405_1.04668459253223 chr3 105053215 105053759 + 1.04668459253223 NA promoter-TSS (NM_001163332) promoter-TSS (NM_001163332) -341 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak2_65_75_-0.487916508619071_6.00396925913405_1.04668459253223-2 chr4 88950907 88951533 + 1.04668459253223 NA Intergenic Intergenic -9178 NR_132735 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak1_91_54_0.454438608698351_6.00857901787383_1.04668459253223-3 chr2 117748409 117749665 + 1.04668459253223 NA Intergenic Intergenic 63765 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_254_171_0.269948644469198_7.5612390769367_1.04666440481783 chr2 157564967 157566698 + 1.04666440481783 NA intron (NM_016916, intron 1 of 1) intron (NM_016916, intron 1 of 1) 529 NM_001355426 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak2_113_120_-0.375919160075238_6.73090365723698_1.04622728087182 chr7 27487225 27488520 + 1.04622728087182 NA intron (NM_018820, intron 1 of 1) intron (NM_018820, intron 1 of 1) 919 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak2_146_93_0.352549914342627_6.73086380884895_1.04622728087179 chr19 3999889 4001091 + 1.04622728087179 NA promoter-TSS (NM_025529) promoter-TSS (NM_025529) -90 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000110949 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak1_126_79_0.375711526686553_6.50978385823064_1.04497728052195-3 chr8 22410954 22412224 + 1.04497728052195 NA intron (NM_020560, intron 1 of 6) CpG 249 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding common_peak1_126_79_0.375711526686553_6.50978385823064_1.04497728052195 chr15 38921173 38922332 + 1.04497728052195 NA Intergenic MLT1A1|LTR|ERVL-MaLR -12157 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_95_104_-0.41747983036736_6.50550560248244_1.04497728052195 chr15 79322492 79323883 + 1.04497728052195 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 5184 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak2_96_104_-0.402634963255045_6.5129280360386_1.04497728052195 chr1 183345044 183346177 + 1.04497728052195 NA intron (NM_177389, intron 6 of 26) intron (NM_177389, intron 6 of 26) 23955 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_126_79_0.375711526686553_6.50978385823064_1.04497728052195-2 chr2 109696161 109697826 + 1.04497728052195 NA intron (NM_001285417, intron 1 of 1) intron (NM_001285417, intron 1 of 1) 2584 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_108_66_0.412605694670674_6.27239203779311_1.0448764443464 chr10 24594448 24595268 + 1.0448764443464 NA promoter-TSS (NM_010217) promoter-TSS (NM_010217) -584 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_136_86_0.363272078267052_6.62457953498225_1.04454681135623 chr5 148550590 148552064 + 1.04454681135623 NA intron (NM_001359199, intron 3 of 6) intron (NM_001359199, intron 3 of 6) 346 NM_001359201 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak2_104_112_-0.395042347215173_6.6226577888076_1.04454681135623 chr19 53390884 53391582 + 1.04454681135623 NA promoter-TSS (NM_172429) promoter-TSS (NM_172429) -599 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_40_51_-0.62242517096741_5.38922713265739_1.04433310181892 chr11 103382316 103382881 + 1.04433310181892 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18906 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_61_34_0.541166522607815_5.39986627824887_1.04433310181892 chr11 97449130 97449953 + 1.04433310181892 NA promoter-TSS (NM_021493) promoter-TSS (NM_021493) -619 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_40_51_-0.62242517096741_5.38922713265739_1.04433310181892-3 chr3 65928806 65929363 + 1.04433310181892 NA Intergenic Intergenic 29165 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak2_40_51_-0.62242517096741_5.38922713265739_1.04433310181892-2 chr16 45885563 45886279 + 1.04433310181892 NA Intergenic Intergenic -41170 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_61_34_0.541166522607815_5.39986627824887_1.04433310181892-4 chrX 96125341 96126306 + 1.04433310181892 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 29778 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_61_34_0.541166522607815_5.39986627824887_1.04433310181892 chr14 45318129 45318932 + 1.04433310181892 NA promoter-TSS (NM_015774) promoter-TSS (NM_015774) 42 NM_015774 50527 Mm.387108 NM_015774 ENSMUSG00000021831 Ero1l ERO1-L|Ero1a ERO1-like (S. cerevisiae) protein-coding common_peak1_61_34_0.541166522607815_5.39986627824887_1.04433310181892-2 chr3 136670179 136670708 + 1.04433310181892 NA 5' UTR (NM_001293622, exon 1 of 13) 5' UTR (NM_001293622, exon 1 of 13) 377 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_40_51_-0.62242517096741_5.38922713265739_1.04433310181892 chr8 64637689 64638649 + 1.04433310181892 NA intron (NM_013494, intron 1 of 8) ORR1A2|LTR|ERVL-MaLR 54940 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_61_34_0.541166522607815_5.39986627824887_1.04433310181892-3 chr9 102637988 102638392 + 1.04433310181892 NA Intergenic Intergenic 11894 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_99_60_0.424506545016177_6.14299061007098_1.04415539603865-2 chr9 113931456 113932102 + 1.04415539603865 NA intron (NM_013699, intron 2 of 15) GC_rich|Low_complexity|Low_complexity 845 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak2_99_60_0.424506545016177_6.14299061007098_1.04415539603865 chr8 71592263 71592911 + 1.04415539603865 NA 5' UTR (NM_001294269, exon 1 of 5) 5' UTR (NM_001294269, exon 1 of 5) 403 NM_001294269 66171 Mm.282284 NM_025396 ENSMUSG00000031807 Pgls 1110030K05Rik|AI447866|Plgs 6-phosphogluconolactonase protein-coding common_peak2_72_82_-0.470623995780998_6.13972743345643_1.04415539603864-2 chr5 98030483 98031377 + 1.04415539603864 NA promoter-TSS (NM_133738) promoter-TSS (NM_133738) 32 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding common_peak2_72_82_-0.470623995780998_6.13972743345643_1.04415539603864 chr10 77622335 77623037 + 1.04415539603864 NA intron (NM_019803, intron 1 of 5) CpG 365 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_122_129_-0.370572643200561_6.83708149142817_1.04305809498325 chr17 27027745 27029174 + 1.04305809498325 NA promoter-TSS (NM_027544) promoter-TSS (NM_027544) 168 NM_007523 12018 Mm.2443 NM_007523 ENSMUSG00000057789 Bak1 Bak|N-BAK1|N-Bak BCL2-antagonist/killer 1 protein-coding common_peak1_277_267_-0.24616711864793_7.94300563113381_1.0423006859867 chr19 53389291 53390628 + 1.0423006859867 NA promoter-TSS (NM_001356986) promoter-TSS (NM_001356986) 82 NM_001356986 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_43_22_0.655613446540047_4.85136867932704_1.04213512323541-2 chr17 26608432 26608926 + 1.04213512323541 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 47167 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-4 chr6 113480639 113481004 + 1.04213512323541 NA intron (NM_178942, intron 15 of 17) intron (NM_178942, intron 15 of 17) -2535 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-3 chr15 95823202 95823611 + 1.04213512323541 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 6666 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541 chr11 88514615 88515203 + 1.04213512323541 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -104342 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-3 chr19 4121236 4121533 + 1.04213512323541 NA exon (NM_001276284, exon 1 of 6) exon (NM_001276284, exon 1 of 6) 191 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-4 chr16 26105309 26105848 + 1.04213512323541 NA exon (NM_173379, exon 1 of 15) exon (NM_173379, exon 1 of 15) 206 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-2 chr8 90816028 90816664 + 1.04213512323541 NA Intergenic Intergenic -12489 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541 chr17 43326221 43326841 + 1.04213512323541 NA Intergenic Intergenic -33900 NM_001357332 224792 Mm.23478 NM_001081178 ENSMUSG00000056492 Adgrf5 8430401C09Rik|9330185D23|AI528491|Gpr116|mKIAA0758 adhesion G protein-coupled receptor F5 protein-coding unique_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-2 chr2 60749262 60750062 + 1.04213512323541 NA Intergenic Intergenic -27059 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_43_22_0.655613446540047_4.85136867932704_1.04213512323541 chr1 45580092 45580499 + 1.04213512323541 NA Intergenic Intergenic -77013 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-2 chr11 16591704 16592186 + 1.04213512323541 NA Intergenic Intergenic -83461 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding unique_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541 chr19 20393864 20394221 + 1.04213512323541 NA Intergenic Intergenic -3371 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-8 chr9 114016017 114016454 + 1.04213512323541 NA intron (NM_178624, intron 2 of 14) intron (NM_178624, intron 2 of 14) 10516 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-2 chr14 7850508 7850834 + 1.04213512323541 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 32714 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-3 chr6 92464293 92464790 + 1.04213512323541 NA intron (NM_001081146, intron 2 of 8) intron (NM_001081146, intron 2 of 8) 16851 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-7 chr8 122546654 122547073 + 1.04213512323541 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 4466 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-4 chr19 28296244 28296710 + 1.04213512323541 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -285311 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-7 chr8 110939566 110940139 + 1.04213512323541 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 19987 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak1_26_36_-0.729851535155547_4.84452759805118_1.04213512323541 chr10 81167150 81167629 + 1.04213512323541 NA intron (NM_021501, intron 1 of 10) intron (NM_021501, intron 1 of 10) 331 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-5 chr5 110809777 110810047 + 1.04213512323541 NA 5' UTR (NM_009469, exon 1 of 28) 5' UTR (NM_009469, exon 1 of 28) 169 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding common_peak2_26_36_-0.729851535155547_4.84452759805118_1.04213512323541-6 chr6 81586983 81587356 + 1.04213512323541 NA Intergenic Intergenic 308494 NR_106091 102465711 NR_106091 ENSMUSG00000106154 Mir7232 mmu-mir-7232 microRNA 7232 ncRNA common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-6 chr2 137693354 137693893 + 1.04213512323541 NA Intergenic Intergenic -562961 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541-5 chr2 25225535 25226183 + 1.04213512323541 NA Intergenic Intergenic -1157 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak1_43_22_0.655613446540047_4.85136867932704_1.04213512323541 chr1 39759065 39759594 + 1.04213512323541 NA Intergenic Intergenic -38340 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding common_peak1_59_69_-0.505805451319081_5.87638029128543_1.04068780415875 chr15 51990971 51991479 + 1.04068780415875 NA intron (NM_009009, intron 1 of 13) CpG 535 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak2_59_69_-0.505805451319081_5.87638029128543_1.04068780415875 chr3 62506440 62507059 + 1.04068780415875 NA exon (NM_028136, exon 1 of 25) exon (NM_028136, exon 1 of 25) 239 NM_028136 72162 Mm.224233 NM_028136 ENSMUSG00000027770 Dhx36 2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding common_peak2_83_49_0.461623526671412_5.87466795311043_1.04068780415874 chr8 124520794 124521561 + 1.04068780415874 NA intron (NM_029746, intron 1 of 17) intron (NM_029746, intron 1 of 17) 410 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 protein-coding common_peak2_83_49_0.461623526671412_5.87466795311043_1.04068780415874-2 chr9 35569484 35570138 + 1.04068780415874 NA intron (NM_029762, intron 1 of 3) CpG 258 NM_029762 76832 Mm.482285 NM_029762 ENSMUSG00000050555 Hyls1 3010015K02Rik HYLS1, centriolar and ciliogenesis associated protein-coding common_peak1_83_49_0.461623526671412_5.87466795311043_1.04068780415874 chr11 32551272 32552566 + 1.04068780415874 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 18653 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_187_187_-0.295037507522071_7.4070700979166_1.04056606446868 chr9 124422633 124424541 + 1.04056606446868 NA promoter-TSS (NR_015516) promoter-TSS (NR_015516) -200 NR_102721 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak1_192_126_0.308467683698026_7.14291852862118_1.03989162825914 chr3 144719169 144720270 + 1.03989162825914 NA intron (NM_001282037, intron 1 of 10) CpG 616 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_114_121_-0.375282116585998_6.74309627926989_1.039258228227 chr7 106235283 106236417 + 1.039258228227 NA Intergenic Intergenic -20510 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_118_73_0.394981561708388_6.40694414648314_1.03923963685319 chr8 120667128 120668048 + 1.03923963685319 NA promoter-TSS (NM_001293559) promoter-TSS (NM_001293559) 524 NM_010926 18117 Mm.2136 NM_010926 ENSMUSG00000031819 Emc8 Cox4nb|Fam158b|Noc4 ER membrane protein complex subunit 8 protein-coding common_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-5 chr7 98487870 98488107 + 1.03889213727317 NA Intergenic L1_Mur3|LINE|L1 -6234 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-10 chr15 96881305 96881572 + 1.03889213727317 NA Intergenic Intergenic 138921 NM_001358060 69354 Mm.250980 NM_027052 ENSMUSG00000022464 Slc38a4 1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3 solute carrier family 38, member 4 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-26 chr4 59625854 59626092 + 1.03889213727317 NA promoter-TSS (NM_153158) promoter-TSS (NM_153158) -238 NM_001015681 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-7 chr13 55508649 55509068 + 1.03889213727317 NA intron (NM_001114088, intron 3 of 12) intron (NM_001114088, intron 3 of 12) -1166 NR_105910 102465570 NR_105910 ENSMUSG00000099096 Mir6945 Gm27779|mmu-mir-6945 microRNA 6945 ncRNA unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-23 chr3 96247011 96247293 + 1.03889213727317 NA exon (NM_178216, exon 1 of 1).2 exon (NM_178216, exon 1 of 1).2 452 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-2 chr12 29958303 29958628 + 1.03889213727317 NA intron (NM_181395, intron 1 of 22) intron (NM_181395, intron 1 of 22) 20429 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-32 chr7 19003997 19004271 + 1.03889213727317 NA promoter-TSS (NM_178757) promoter-TSS (NM_178757) 69 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-35 chr8 70935179 70935551 + 1.03889213727317 NA Intergenic Intergenic 4050 NM_001357655 665828 Mm.482151 NM_001357655 ENSMUSG00000074252 Gm10654 EG665828 predicted gene 10654 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-3 chr10 116208385 116208801 + 1.03889213727317 NA intron (NM_001358484, intron 5 of 12) intron (NM_001358484, intron 5 of 12) 31242 NM_001161840 19279 Mm.336316 NM_011217 ENSMUSG00000020151 Ptprr Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213 protein tyrosine phosphatase, receptor type, R protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-10 chr13 63258052 63258484 + 1.03889213727317 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 18239 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-9 chr12 3390485 3390729 + 1.03889213727317 NA intron (NM_008445, intron 5 of 7) intron (NM_008445, intron 5 of 7) 25475 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-3 chr16 37676254 37676554 + 1.03889213727317 NA Intergenic Intergenic -22036 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-12 chr16 66922451 66922754 + 1.03889213727317 NA intron (NM_001347247, intron 1 of 9) MLTR25A|LTR|ERVK 265484 NR_040512 75501 Mm.394300 NR_040512 ENSMUSG00000092599 1700010K23Rik - RIKEN cDNA 1700010K23 gene ncRNA unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-18 chr2 131505352 131505719 + 1.03889213727317 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 13673 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-28 chr4 155564877 155565164 + 1.03889213727317 NA intron (NM_001355599, intron 1 of 10) intron (NM_001355599, intron 1 of 10) 1205 NM_001355599 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-8 chr11 98949382 98949986 + 1.03889213727317 NA intron (NM_001177302, intron 2 of 9) intron (NM_001177302, intron 2 of 9) 9973 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-21 chr3 21408532 21408816 + 1.03889213727317 NA Intergenic Intergenic -667978 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-2 chr10 39959503 39959895 + 1.03889213727317 NA 3' UTR (NM_001113388, exon 4 of 4) 3' UTR (NM_001113388, exon 4 of 4) 454 NM_001173500 100041085 Mm.332530 NM_001173500 ENSMUSG00000071335 Mfsd4b3 G630090E17Rik|Naglt1c major facilitator superfamily domain containing 4B3 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-19 chr2 131828476 131828771 + 1.03889213727317 NA intron (NR_029381, intron 2 of 2) intron (NR_029381, intron 2 of 2) 19033 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA common_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-3 chr16 85802313 85802608 + 1.03889213727317 NA exon (NM_009621, exon 1 of 9) exon (NM_009621, exon 1 of 9) 653 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-7 chr8 107448713 107449036 + 1.03889213727317 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 12476 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-34 chr7 113167857 113168109 + 1.03889213727317 NA Intergenic Intergenic -25968 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-13 chr2 11500888 11501198 + 1.03889213727317 NA intron (NM_001177758, intron 1 of 14) intron (NM_001177758, intron 1 of 14) 1047 NM_001177754 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-9 chr15 69079695 69079965 + 1.03889213727317 NA intron (NM_010158, intron 7 of 8) intron (NM_010158, intron 7 of 8) 151410 NM_010158 13992 Mm.17964 NM_010158 ENSMUSG00000022332 Khdrbs3 Etle|SLM-2|Salp|Slm2|T-STAR KH domain containing, RNA binding, signal transduction associated 3 protein-coding common_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317 chr11 31873112 31873660 + 1.03889213727317 NA exon (NM_001290676, exon 1 of 9) exon (NM_001290676, exon 1 of 9) 2446 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317 chr10 116948522 116948745 + 1.03889213727317 NA intron (NM_001359645, intron 1 of 10) intron (NM_001359645, intron 1 of 10) 1820 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-18 chr5 5649597 5649918 + 1.03889213727317 NA intron (NM_172447, intron 3 of 22) intron (NM_172447, intron 3 of 22) 14475 NM_172447 207686 Mm.319007 NM_172447 ENSMUSG00000040473 Cfap69 4921525K03|A330021E22Rik|AI427898 cilia and flagella associated protein 69 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-7 chr11 77465538 77466061 + 1.03889213727317 NA intron (NM_139129, intron 2 of 8) intron (NM_139129, intron 2 of 8) 1886 NM_139130 216961 Mm.33477 NM_139128 ENSMUSG00000020836 Coro6 - coronin 6 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-13 chr17 12291040 12291570 + 1.03889213727317 NA intron (NM_001357722, intron 1 of 25) intron (NM_001357722, intron 1 of 25) 27355 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-16 chr19 30850376 30850814 + 1.03889213727317 NA intron (NM_001013833, intron 5 of 17) intron (NM_001013833, intron 5 of 17) 80367 NR_033643 625995 Mm.454508 NR_033643 Gm6642 EG625995 ubiquitin-like 5 pseudogene pseudo unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-4 chr10 75558127 75558587 + 1.03889213727317 NA intron (NM_198860, intron 1 of 3) B1_Mm|SINE|Alu 1973 NM_198860 192734 Mm.259320 NM_198860 ENSMUSG00000046807 Lrrc75b AI646023|Fam211b leucine rich repeat containing 75B protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-6 chr11 49204418 49204740 + 1.03889213727317 NA intron (NM_001024846, intron 1 of 4) intron (NM_001024846, intron 1 of 4) 1079 NM_009562 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-5 chr4 56374541 56374770 + 1.03889213727317 NA Intergenic Intergenic 366770 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-14 chr2 33204653 33204936 + 1.03889213727317 NA intron (NM_001290570, intron 7 of 16) intron (NM_001290570, intron 7 of 16) -11167 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-33 chr7 67597561 67597880 + 1.03889213727317 NA intron (NM_027413, intron 5 of 5) intron (NM_027413, intron 5 of 5) 47516 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-4 chr11 82015443 82015695 + 1.03889213727317 NA Intergenic Intergenic -20008 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-15 chr3 79884995 79885237 + 1.03889213727317 NA promoter-TSS (NM_133187) promoter-TSS (NM_133187) -814 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317 chr1 136018071 136018404 + 1.03889213727317 NA promoter-TSS (NM_001160146) promoter-TSS (NM_001160146) 81 NM_001160146 66241 Mm.41773 NM_025439 ENSMUSG00000026411 Tmem9 1500015G18Rik|AW545782 transmembrane protein 9 protein-coding common_peak2_23_10_0.851444027807952_3.88515363254127_1.03889213727317-2 chr4 107488838 107489045 + 1.03889213727317 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 54222 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-11 chr16 55822370 55822632 + 1.03889213727317 NA promoter-TSS (NM_001159394) promoter-TSS (NM_001159394) -363 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-17 chr2 127890813 127891187 + 1.03889213727317 NA intron (NM_028765, intron 8 of 17) intron (NM_028765, intron 8 of 17) 36372 NM_028765 74121 Mm.244835 NM_028765 ENSMUSG00000027380 Acoxl 1200014P05Rik|AV025673 acyl-Coenzyme A oxidase-like protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-14 chr19 10698993 10699539 + 1.03889213727317 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) -1502 NM_001361964 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-6 chr12 118301584 118301834 + 1.03889213727317 NA promoter-TSS (NM_009239) promoter-TSS (NM_009239) -269 NM_001166385 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-11 chr14 25761136 25761494 + 1.03889213727317 NA intron (NM_001101433, intron 1 of 3) intron (NM_001101433, intron 1 of 3) 7541 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-6 chr8 47982996 47983417 + 1.03889213727317 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 7345 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-2 chr1 181246932 181247165 + 1.03889213727317 NA Intergenic Intergenic -35070 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-25 chr3 159916781 159917314 + 1.03889213727317 NA intron (NM_001356350, intron 10 of 12) intron (NM_001356350, intron 10 of 12) 77397 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317 chr10 12918983 12919293 + 1.03889213727317 NA intron (NR_038028, intron 2 of 2) intron (NR_038028, intron 2 of 2) 3989 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-16 chr4 116558589 116559096 + 1.03889213727317 NA intron (NM_029868, intron 1 of 11) intron (NM_029868, intron 1 of 11) 1115 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-31 chr6 146966011 146966463 + 1.03889213727317 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -11816 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-24 chr3 122408873 122409150 + 1.03889213727317 NA Intergenic Intergenic -10746 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-29 chr6 29736965 29737483 + 1.03889213727317 NA intron (NM_176996, intron 1 of 11) intron (NM_176996, intron 1 of 11) 1727 NM_176996 319757 Mm.29279 NM_176996 ENSMUSG00000001761 Smo E130215L21Rik|Smoh|bnb|smoothened smoothened, frizzled class receptor protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-20 chr2 156726073 156726337 + 1.03889213727317 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 4926 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-30 chr6 112777893 112778133 + 1.03889213727317 NA intron (NM_080448, intron 5 of 21) intron (NM_080448, intron 5 of 21) -81343 NM_001167730 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-17 chr4 134756661 134756962 + 1.03889213727317 NA intron (NM_145554, intron 3 of 8) intron (NM_145554, intron 3 of 8) 11193 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-5 chr12 24679890 24680154 + 1.03889213727317 NA intron (NM_001004455, intron 1 of 4) intron (NM_001004455, intron 1 of 4) 1773 NM_138686 12879 Mm.52265 NM_138686 ENSMUSG00000062563 Cys1 2900006B19Rik|AV218859|Ccap|ck|cpk cystin 1 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-3 chr10 34019958 34020225 + 1.03889213727317 NA promoter-TSS (NM_025614) promoter-TSS (NM_025614) -475 NM_025614 66521 Mm.28528 NM_025614 ENSMUSG00000019782 Rwdd1 0710001K08Rik|2610002D06Rik|2700069A07Rik|IH1 RWD domain containing 1 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-5 chr11 16841321 16841593 + 1.03889213727317 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 89254 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-4 chr2 38286410 38286752 + 1.03889213727317 NA intron (NM_146122, intron 1 of 21) intron (NM_146122, intron 1 of 21) 803 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding common_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-2 chr11 35961737 35962175 + 1.03889213727317 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 18133 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-12 chr15 59776381 59776701 + 1.03889213727317 NA Intergenic Intergenic 18418 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-15 chr19 11916316 11916575 + 1.03889213727317 NA intron (NM_172635, intron 2 of 18) intron (NM_172635, intron 2 of 18) 4046 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-27 chr4 141887026 141887313 + 1.03889213727317 NA Intergenic Intergenic -12249 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-4 chr18 81319978 81320281 + 1.03889213727317 NA Intergenic Intergenic -333551 NM_178280 20689 Mm.215917 NM_178280 ENSMUSG00000024565 Sall3 B130022O04Rik|Msal|Msal-1|Sal|Salt|Spalt spalt like transcription factor 3 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-22 chr3 79980865 79981165 + 1.03889213727317 NA Intergenic Intergenic 95085 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_23_10_0.851444027807952_3.88515363254127_1.03889213727317 chr2 145167736 145167946 + 1.03889213727317 NA promoter-TSS (NM_001356497) promoter-TSS (NM_001356497) 66 NM_001356497 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak2_11_20_-1.07438679676027_3.85512402439863_1.03889213727317-8 chr14 59440517 59440785 + 1.03889213727317 NA promoter-TSS (NM_026908) promoter-TSS (NM_026908) 229 NM_001320725 107303348 NM_001320725 Gm45935 Setdb2-phf11c predicted gene, 45935 protein-coding unique_peak1_23_10_0.851444027807952_3.88515363254127_1.03889213727317-36 chr9 78587769 78588041 + 1.03889213727317 NA exon (NM_001276452, exon 1 of 11) exon (NM_001276452, exon 1 of 11) 140 NM_172773 235504 Mm.46932 NM_172773 ENSMUSG00000049624 Slc17a5 4631416G20Rik|4732491M05|AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 (anion/sugar transporter), member 5 protein-coding common_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309-5 chr9 59656542 59657128 + 1.03825765497309 NA intron (NM_001253883, intron 1 of 10) CpG 467 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak2_68_39_0.501760809136346_5.57280849945554_1.03825765497309 chr15 66844402 66844782 + 1.03825765497309 NA intron (NM_009375, intron 45 of 47) intron (NM_009375, intron 45 of 47) -12763 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309-4 chr4 89523915 89524953 + 1.03825765497309 NA Intergenic Intergenic -163764 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak1_68_39_0.501760809136346_5.57280849945554_1.03825765497309-3 chr6 84180863 84181889 + 1.03825765497309 NA intron (NM_001077694, intron 41 of 54) intron (NM_001077694, intron 41 of 54) 161990 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding unique_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309-2 chr6 35132813 35133696 + 1.03825765497309 NA intron (NM_001164413, intron 1 of 11) intron (NM_001164413, intron 1 of 11) 483 NM_001164412 53621 Mm.214525 NM_016877 ENSMUSG00000038784 Cnot4 Not4|Not4h|Not4hp CCR4-NOT transcription complex, subunit 4 protein-coding common_peak1_68_39_0.501760809136346_5.57280849945554_1.03825765497309-2 chr5 117360264 117361252 + 1.03825765497309 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 3453 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309-2 chr19 4268397 4269206 + 1.03825765497309 NA intron (NM_198113, intron 1 of 13) intron (NM_198113, intron 1 of 13) 432 NM_001356620 245857 Mm.248388 NM_198113 ENSMUSG00000034616 Ssh3 SSH-3|SSH-3L slingshot protein phosphatase 3 protein-coding common_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309 chr15 31341904 31342742 + 1.03825765497309 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 25436 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak2_46_57_-0.584319691825518_5.56582114921481_1.03825765497309 chr12 36156849 36157598 + 1.03825765497309 NA promoter-TSS (NM_025840) promoter-TSS (NM_025840) 99 NM_146033 217473 Mm.130422 NM_146033 ENSMUSG00000036188 Ankmy2 AI035571|ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding common_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309-3 chr4 48541566 48542239 + 1.03825765497309 NA intron (NM_028137, intron 1 of 2) intron (NM_028137, intron 1 of 2) 1403 NM_028137 66665 Mm.140749 NM_028137 ENSMUSG00000039693 Msantd3 2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3 Myb/SANT-like DNA-binding domain containing 3 protein-coding common_peak1_68_39_0.501760809136346_5.57280849945554_1.03825765497309 chr4 63064675 63065323 + 1.03825765497309 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 89173 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding unique_peak1_69_39_0.522372918085196_5.58311455392996_1.03825765497309 chr12 33174203 33175315 + 1.03825765497309 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 27073 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_55_30_0.570447803831805_5.23942021230278_1.03797455172871-2 chr17 13668426 13669269 + 1.03797455172871 NA Intergenic Intergenic -91694 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak1_55_30_0.570447803831805_5.23942021230278_1.03797455172871 chr1 179960019 179960730 + 1.03797455172871 NA promoter-TSS (NM_001346805) promoter-TSS (NM_001346805) -386 NM_001359541 226751 Mm.259655 NM_001033285 ENSMUSG00000026490 Cdc42bpa A930014J19Rik|DMPK-like CDC42 binding protein kinase alpha protein-coding common_peak2_55_30_0.570447803831805_5.23942021230278_1.03797455172871 chr3 121725468 121726040 + 1.03797455172871 NA intron (NM_010171, intron 2 of 5) intron (NM_010171, intron 2 of 5) 2217 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_35_46_-0.662877603004933_5.22315005017517_1.0379745517287 chr15 89180894 89181462 + 1.0379745517287 NA promoter-TSS (NM_138749) promoter-TSS (NM_138749) -390 NM_138749 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak2_35_46_-0.662877603004933_5.22315005017517_1.0379745517287-3 chr4 149954540 149954974 + 1.0379745517287 NA intron (NM_029035, intron 1 of 2) CpG 249 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak1_35_46_-0.662877603004933_5.22315005017517_1.0379745517287 chr17 30576019 30576563 + 1.0379745517287 NA promoter-TSS (NM_027060) promoter-TSS (NM_027060) -4 NM_027060 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak2_35_46_-0.662877603004933_5.22315005017517_1.0379745517287-2 chr17 56626139 56626808 + 1.0379745517287 NA promoter-TSS (NM_001357897) promoter-TSS (NM_001357897) 430 NM_028782 74142 Mm.329136 NM_028782 ENSMUSG00000041168 Lonp1 1200017E13Rik|LON|Prss15 lon peptidase 1, mitochondrial protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074 chr1 14484229 14484447 + 1.03789460276074 NA Intergenic Lx8|LINE|L1 -174139 NM_010164 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-7 chr11 21368458 21368666 + 1.03789460276074 NA intron (NM_001290634, intron 1 of 9) intron (NM_001290634, intron 1 of 9) 2067 NM_139297 216558 Mm.28877 NM_139297 ENSMUSG00000001891 Ugp2 UDPGP|UGPase UDP-glucose pyrophosphorylase 2 protein-coding common_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074 chr1 135466520 135466750 + 1.03789460276074 NA intron (NM_173437, intron 9 of 28) intron (NM_173437, intron 9 of 28) -11952 NR_049188 100885827 NR_049188 ENSMUSG00000093515 Mir1231 Gm23720|mir-1231|mmu-mir-1231 microRNA 1231 ncRNA unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-17 chr17 46699175 46699374 + 1.03789460276074 NA intron (NM_001357684, intron 2 of 14) intron (NM_001357684, intron 2 of 14) 5728 NM_009358 21770 Mm.295009 NM_009358 ENSMUSG00000059409 Ppp2r5d B'delta|TEG-271|Tex271 protein phosphatase 2, regulatory subunit B', delta protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-27 chr6 84892583 84892809 + 1.03789460276074 NA intron (NM_177077, intron 7 of 21) intron (NM_177077, intron 7 of 21) 176817 NM_177077 75914 Mm.159621 NM_177077 ENSMUSG00000033769 Exoc6b 4930569O18Rik|G430127E12Rik|Sec15b|Sec15l2|mKIAA0919 exocyst complex component 6B protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-13 chr12 111690714 111690978 + 1.03789460276074 NA Intergenic Intergenic 12741 NM_177374 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-19 chr6 115988884 115989129 + 1.03789460276074 NA intron (NM_026376, intron 1 of 35) PB1D10|SINE|Alu 5999 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-18 chr17 65784262 65784490 + 1.03789460276074 NA intron (NR_152099, intron 2 of 20) intron (NR_152099, intron 2 of 20) 1021 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak2_9_6_0.249397000487314_2.93205342230126_1.03789460276074 chr18 68190979 68191191 + 1.03789460276074 NA intron (NM_172631, intron 3 of 5) B1_Mm|SINE|Alu -36861 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074 chr1 52598554 52598844 + 1.03789460276074 NA Intergenic ID_B1|SINE|B4 -18407 NR_151614 102634661 Mm.337881 NR_151614 ENSMUSG00000099878 Gm28178 - predicted gene 28178 ncRNA common_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-2 chr11 59457509 59457722 + 1.03789460276074 NA non-coding (NR_037992, exon 6 of 6) non-coding (NR_037992, exon 6 of 6) 7570 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-3 chr15 77077902 77078111 + 1.03789460276074 NA TTS (NM_001110830) TTS (NM_001110830) -6392 NR_108037 74303 Mm.444304 NR_108037 ENSMUSG00000097267 1700109K24Rik 4933425G21Rik RIKEN cDNA 1700109K24 gene ncRNA unique_peak2_9_6_0.249397000487314_2.93205342230126_1.03789460276074-4 chr5 43693088 43693300 + 1.03789460276074 NA intron (NM_001359906, intron 12 of 37) intron (NM_001359906, intron 12 of 37) 30815 NM_001359903 231214 Mm.44434 NM_172274 ENSMUSG00000039765 Cc2d2a 5730509K17Rik|b2b1035Clo coiled-coil and C2 domain containing 2A protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-11 chr19 44247072 44247284 + 1.03789460276074 NA Intergenic Intergenic 43890 NM_024450 30049 Mm.480594 NM_024450 ENSMUSG00000025202 Scd3 4930513N16Rik stearoyl-coenzyme A desaturase 3 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-4 chr11 87736974 87737191 + 1.03789460276074 NA promoter-TSS (NM_009296) promoter-TSS (NM_009296) -469 NM_001355753 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-2 chr1 71863846 71864132 + 1.03789460276074 NA Intergenic Intergenic -24123 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-10 chr11 84062566 84062762 + 1.03789460276074 NA intron (NM_019819, intron 1 of 2) ID_B1|SINE|B4 5693 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-14 chr2 145784663 145784917 + 1.03789460276074 NA Intergenic Intergenic -1326 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-19 chr2 4569251 4569468 + 1.03789460276074 NA intron (NM_001177844, intron 2 of 11) intron (NM_001177844, intron 2 of 11) 9605 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-5 chr12 27500647 27500864 + 1.03789460276074 NA Intergenic Intergenic -158037 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-13 chr2 135743888 135744137 + 1.03789460276074 NA intron (NM_001355156, intron 2 of 37) intron (NM_001355156, intron 2 of 37) -20826 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-9 chr11 79638119 79638319 + 1.03789460276074 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -15056 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-15 chr15 12206471 12206697 + 1.03789460276074 NA intron (NM_001356498, intron 1 of 15) intron (NM_001356498, intron 1 of 15) 1556 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-11 chr12 86856538 86856779 + 1.03789460276074 NA Intergenic B1_Mm|SINE|Alu 28156 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak2_9_6_0.249397000487314_2.93205342230126_1.03789460276074-3 chr3 79542250 79542524 + 1.03789460276074 NA intron (NM_001162999, intron 1 of 16) B1_Mus1|SINE|Alu 25292 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-2 chr1 131088736 131088952 + 1.03789460276074 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 8999 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074 chr4 137499123 137499362 + 1.03789460276074 NA intron (NM_008305, intron 1 of 96) PB1D10|SINE|Alu 30439 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-16 chr15 100754393 100754625 + 1.03789460276074 NA Intergenic Intergenic -7238 NM_021530 59033 Mm.209856 NM_021530 ENSMUSG00000023032 Slc4a8 AW493845|C230026C11|NDCBE|kNBC-3 solute carrier family 4 (anion exchanger), member 8 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-12 chr2 109699110 109699399 + 1.03789460276074 NA intron (NM_001285417, intron 1 of 1) intron (NM_001285417, intron 1 of 1) 4845 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-10 chr14 61680568 61680817 + 1.03789460276074 NA intron (NR_028264, intron 1 of 6) intron (NR_028264, intron 1 of 6) 1681 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-8 chr13 34402834 34403120 + 1.03789460276074 NA Intergenic Intergenic -57795 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-4 chr1 138992786 138993061 + 1.03789460276074 NA intron (NM_181347, intron 1 of 20) intron (NM_181347, intron 1 of 20) 15266 NR_108103 78229 Mm.437838 NR_108103 ENSMUSG00000104900 4930596I21Rik - RIKEN cDNA 4930596I21 gene ncRNA unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-22 chr3 60503849 60504038 + 1.03789460276074 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 2764 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-20 chr2 6293999 6294214 + 1.03789460276074 NA intron (NR_040333, intron 4 of 6) intron (NR_040333, intron 4 of 6) -28651 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-3 chr10 95709684 95709893 + 1.03789460276074 NA Intergenic Intergenic -145642 NM_001358996 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-22 chr9 96362490 96362782 + 1.03789460276074 NA intron (NM_001357213, intron 1 of 7) intron (NM_001357213, intron 1 of 7) 1079 NM_001357213 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-3 chr1 81746779 81747020 + 1.03789460276074 NA Intergenic Intergenic -385017 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-2 chr5 17557543 17557737 + 1.03789460276074 NA Intergenic Intergenic -17176 NM_013657 20348 Mm.5071 NM_013657 ENSMUSG00000028780 Sema3c 1110036B02Rik|SemE|Semae sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-16 chr3 128415180 128415388 + 1.03789460276074 NA Intergenic Intergenic -183679 NR_045704 402774 Mm.209170 NR_045704 ENSMUSG00000105816 D030025E07Rik - RIKEN cDNA D030025E07 gene ncRNA common_peak2_9_6_0.249397000487314_2.93205342230126_1.03789460276074-2 chr8 106737625 106737830 + 1.03789460276074 NA intron (NM_173037, intron 12 of 17) intron (NM_173037, intron 12 of 17) 54659 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-23 chr3 65873959 65874174 + 1.03789460276074 NA Intergenic Intergenic 84183 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-15 chr3 79243260 79243506 + 1.03789460276074 NA intron (NR_045502, intron 1 of 2) intron (NR_045502, intron 1 of 2) 30464 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-6 chr1 153266618 153266806 + 1.03789460276074 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 66074 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-21 chr2 77246145 77246368 + 1.03789460276074 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 34336 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-14 chr14 18269857 18270061 + 1.03789460276074 NA exon (NM_025586, exon 3 of 4) exon (NM_025586, exon 3 of 4) 1022 NM_001359897 66480 Mm.2050 NM_025586 ENSMUSG00000012405 Rpl15 2510008H07Rik ribosomal protein L15 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-21 chr8 77772394 77772598 + 1.03789460276074 NA Intergenic Intergenic -48044 NM_010332 13617 Mm.283168 NM_010332 ENSMUSG00000031616 Ednra AEA001|ET-AR|ETa|Gpcr10|Mhdaaea1 endothelin receptor type A protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-9 chr14 18829588 18829823 + 1.03789460276074 NA intron (NM_001360327, intron 3 of 5) intron (NM_001360327, intron 3 of 5) 63708 NM_001360328 218793 Mm.23551 NM_144839 ENSMUSG00000058317 Ube2e2 BC016265 ubiquitin-conjugating enzyme E2E 2 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-18 chr5 92139319 92139535 + 1.03789460276074 NA intron (NM_019490, intron 1 of 23) intron (NM_019490, intron 1 of 23) 1489 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-28 chr6 97177114 97177344 + 1.03789460276074 NA intron (NM_001081111, intron 1 of 16) intron (NM_001081111, intron 1 of 16) 1895 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-30 chr8 75016231 75016437 + 1.03789460276074 NA 5' UTR (NM_001316754, exon 1 of 7) 5' UTR (NM_001316754, exon 1 of 7) 112 NM_001316754 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-24 chr3 104289027 104289244 + 1.03789460276074 NA Intergenic Intergenic -68729 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-4 chr18 60604305 60604510 + 1.03789460276074 NA 5' UTR (NM_001109975, exon 2 of 2) 5' UTR (NM_001109975, exon 2 of 2) 5697 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-6 chr12 102326157 102326425 + 1.03789460276074 NA intron (NM_177620, intron 3 of 9) intron (NM_177620, intron 3 of 9) 42650 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-20 chr8 25462555 25462791 + 1.03789460276074 NA Intergenic Intergenic -56086 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak2_9_6_0.249397000487314_2.93205342230126_1.03789460276074 chr14 57315790 57316068 + 1.03789460276074 NA intron (NM_030004, intron 3 of 7) intron (NM_030004, intron 3 of 7) 82554 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-29 chr7 34266727 34267002 + 1.03789460276074 NA intron (NM_172741, intron 1 of 12) MIRc|SINE|MIR 18745 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-7 chr13 11551073 11551277 + 1.03789460276074 NA Intergenic Intergenic 29123 NR_027813 664793 Mm.410565 NR_027813 ENSMUSG00000113593 Zp4-ps EG664793|Zp4|Zpb zona pellucida glycoprotein 4, pseudogene pseudo unique_peak1_6_8_-0.624115948503898_2.85786702719036_1.03789460276074 chr15 13241763 13242023 + 1.03789460276074 NA Intergenic Intergenic -68218 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-25 chr3 145103638 145103852 + 1.03789460276074 NA Intergenic Intergenic -4639 NM_178697 229933 Mm.331420 NM_178697 ENSMUSG00000036960 Clca2 4732440A06|AI586120|Clca5 chloride channel accessory 2 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-5 chr1 151215825 151216082 + 1.03789460276074 NA Intergenic L2b|LINE|L2 77919 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-5 chr9 88277572 88277797 + 1.03789460276074 NA Intergenic ID_B1|SINE|B4 -49925 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-26 chr4 28815083 28815296 + 1.03789460276074 NA intron (NM_010141, intron 1 of 16) CpG 2044 NM_001122889 13841 Mm.257266 NM_010141 ENSMUSG00000028289 Epha7 Cek11|Ebk|Ehk3|Hek11|Mdk1 Eph receptor A7 protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-12 chr12 108249418 108249637 + 1.03789460276074 NA intron (NM_001159910, intron 1 of 5) intron (NM_001159910, intron 1 of 5) 25890 NM_001159910 668158 Mm.482792 NM_001159910 ENSMUSG00000084883 Ccdc85c EG668158|Gm265|Gm9010|hhy coiled-coil domain containing 85C protein-coding unique_peak1_9_6_0.249397000487314_2.93205342230126_1.03789460276074-8 chr11 72152802 72153000 + 1.03789460276074 NA Intergenic Intergenic -17012 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding unique_peak2_9_6_0.249397000487314_2.93205342230126_1.03789460276074-2 chr19 10828499 10828731 + 1.03789460276074 NA intron (NM_009852, intron 1 of 12) intron (NM_009852, intron 1 of 12) 1443 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding unique_peak2_6_8_-0.624115948503898_2.85786702719036_1.03789460276074-17 chr5 3198794 3198993 + 1.03789460276074 NA Intergenic Intergenic -145000 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_76_44_0.488981355841514_5.73634377425043_1.03754770036046 chr3 81932575 81932970 + 1.03754770036046 NA exon (NM_177662, exon 1 of 8) exon (NM_177662, exon 1 of 8) 171 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding common_peak2_52_63_-0.55422994473014_5.72288502763493_1.03754770036046-2 chr9 22225402 22226217 + 1.03754770036046 NA promoter-TSS (NM_001164624) promoter-TSS (NM_001164624) 97 NM_001164624 235047 Mm.290849 NM_172763 ENSMUSG00000057982 Zfp809 BB114266|C330026E23 zinc finger protein 809 protein-coding common_peak1_52_63_-0.55422994473014_5.72288502763493_1.03754770036046 chr5 105806333 105807471 + 1.03754770036046 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -69666 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_76_44_0.488981355841514_5.73634377425043_1.03754770036046 chr11 72490187 72491050 + 1.03754770036046 NA promoter-TSS (NM_153060) promoter-TSS (NM_153060) -698 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_52_63_-0.55422994473014_5.72288502763493_1.03754770036046 chr5 100428960 100429487 + 1.03754770036046 NA non-coding (NR_034038, exon 2 of 5) non-coding (NR_034038, exon 2 of 5) 312 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA common_peak1_76_44_0.488981355841514_5.73634377425043_1.03754770036046-3 chr7 109615584 109616431 + 1.03754770036046 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 561 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_76_44_0.488981355841514_5.73634377425043_1.03754770036046-2 chr14 69706786 69707482 + 1.03754770036046 NA exon (NM_001301652, exon 1 of 7) exon (NM_001301652, exon 1 of 7) 359 NM_001301652 71843 Mm.27738 NM_001146012 ENSMUSG00000034194 R3hcc1 1700020M16Rik|AA407796 R3H domain and coiled-coil containing 1 protein-coding common_peak2_143_148_-0.341567230935945_7.04838490499419_1.03730423899566 chr9 45934071 45935898 + 1.03730423899566 NA intron (NM_011526, intron 1 of 4) intron (NM_011526, intron 1 of 4) 1074 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding common_peak1_181_118_0.318269501574811_7.05395251409535_1.03730423899566 chr4 148524781 148526960 + 1.03730423899566 NA intron (NM_020009, intron 33 of 57) intron (NM_020009, intron 33 of 57) -25408 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak1_137_87_0.357202305813168_6.63803277154388_1.03706908711023 chr8 25840315 25841546 + 1.03706908711023 NA promoter-TSS (NM_011791) promoter-TSS (NM_011791) -143 NM_011791 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ASH2 like histone lysine methyltransferase complex subunit protein-coding common_peak2_127_80_0.369025102613439_6.52436255419134_1.03688480064196 chr9 66591804 66592990 + 1.03688480064196 NA intron (NM_144937, intron 1 of 14) CpG 718 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak1_127_80_0.369025102613439_6.52436255419134_1.03688480064196 chr17 87107662 87108920 + 1.03688480064196 NA intron (NM_019654, intron 1 of 2) CpG 612 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_97_105_-0.401617290770388_6.527111809178_1.03688480064193 chr12 31949094 31950250 + 1.03688480064193 NA intron (NM_177993, intron 1 of 8) CpG 573 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_30_41_-0.714812903652734_5.03491097095239_1.0364730969458 chr6 146527146 146527597 + 1.0364730969458 NA Intergenic Intergenic -25148 NM_019923 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_31_41_-0.669332358134209_5.05765124371166_1.0364730969458 chr1 43263689 43264480 + 1.0364730969458 NA Intergenic Intergenic -67323 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_30_41_-0.714812903652734_5.03491097095239_1.0364730969458-5 chr6 146527208 146527611 + 1.0364730969458 NA Intergenic Intergenic -25186 NM_019923 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_30_41_-0.714812903652734_5.03491097095239_1.0364730969458-3 chr15 102235058 102235822 + 1.0364730969458 NA 3' UTR (NM_011244, exon 10 of 10) 3' UTR (NM_011244, exon 10 of 10) -3505 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak2_30_41_-0.714812903652734_5.03491097095239_1.0364730969458-4 chr17 78392700 78393157 + 1.0364730969458 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 25224 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_30_41_-0.714812903652734_5.03491097095239_1.0364730969458 chr12 69241607 69242336 + 1.0364730969458 NA exon (NM_178253, exon 1 of 13) exon (NM_178253, exon 1 of 13) 139 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding common_peak2_31_41_-0.669332358134209_5.05765124371166_1.0364730969458-2 chr8 34954455 34955264 + 1.0364730969458 NA intron (NM_175091, intron 1 of 26) intron (NM_175091, intron 1 of 26) 10831 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak2_30_41_-0.714812903652734_5.03491097095239_1.0364730969458-2 chr13 23757055 23757714 + 1.0364730969458 NA TTS (NM_178193) TTS (NM_178193) 447 NM_178193 326620 Mm.261642 NM_178193 ENSMUSG00000069266 Hist1h4b - histone cluster 1, H4b protein-coding common_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579-3 chr14 121825558 121826359 + 1.03647309694579 NA Intergenic Intergenic -28224 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579-2 chr14 66235488 66236037 + 1.03647309694579 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) -21938 NM_001360233 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579-2 chr9 103009045 103009694 + 1.03647309694579 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 880 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579-5 chr4 119232972 119233435 + 1.03647309694579 NA promoter-TSS (NM_001042411) promoter-TSS (NM_001042411) 288 NM_019782 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding common_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579-4 chr15 103378797 103379112 + 1.03647309694579 NA Intergenic Intergenic -12163 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579 chr1 81760262 81760964 + 1.03647309694579 NA Intergenic Intergenic -371303 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579 chr1 87182182 87182992 + 1.03647309694579 NA promoter-TSS (NM_027084) promoter-TSS (NM_027084) -727 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding common_peak1_49_26_0.60741135998884_5.05859318215789_1.03647309694579-6 chr8 25784706 25785087 + 1.03647309694579 NA promoter-TSS (NM_026032) promoter-TSS (NM_026032) 313 NM_026121 67384 Mm.118400 NM_026121 ENSMUSG00000037316 Bag4 2410112I15Rik|SODD BCL2-associated athanogene 4 protein-coding common_peak2_169_110_0.320961930593736_6.95489683164697_1.03611409188097 chr7 34388313 34389609 + 1.03611409188097 NA intron (NM_025948, intron 1 of 10) CpG 744 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak1_134_139_-0.344134246864172_6.95721589351288_1.03611409188097 chr11 73177201 73178518 + 1.03611409188097 NA promoter-TSS (NM_025318) promoter-TSS (NM_025318) 776 NM_029564 76281 Mm.371656 NM_029564 ENSMUSG00000040158 Tax1bp3 1300011C24Rik|TIP-1 Tax1 (human T cell leukemia virus type I) binding protein 3 protein-coding common_peak2_109_67_0.404314480527355_6.28962008151402_1.03533151715393 chr1 163929732 163930453 + 1.03533151715393 NA 5' UTR (NM_028776, exon 1 of 14) 5' UTR (NM_028776, exon 1 of 14) 327 NM_028776 240880 Mm.389213 NM_028776 ENSMUSG00000026584 Scyl3 1200016D23Rik|6030457O16|AW214499|Pace1 SCY1-like 3 (S. cerevisiae) protein-coding common_peak1_109_67_0.404314480527355_6.28962008151402_1.03533151715393 chr12 71887166 71888399 + 1.03533151715393 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) -1761 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_81_90_-0.436835072598258_6.28937710389957_1.03533151715391 chr4 107178424 107179409 + 1.03533151715391 NA promoter-TSS (NM_025617) promoter-TSS (NM_025617) 286 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding common_peak1_66_76_-0.485233523054514_6.02416977916764_1.03520063226399 chr1 20617287 20618115 + 1.03520063226399 NA intron (NM_153179, intron 1 of 66) intron (NM_153179, intron 1 of 66) 356 NM_153179 241035 Mm.249253 NM_153179 ENSMUSG00000043760 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 protein-coding common_peak1_92_55_0.443930219722633_6.02932003191892_1.03520063226399 chr15 64219942 64221323 + 1.03520063226399 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 92041 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_92_55_0.443930219722633_6.02932003191892_1.03520063226399-2 chr2 135862422 135863776 + 1.03520063226399 NA intron (NM_001355156, intron 3 of 37) intron (NM_001355156, intron 3 of 37) 98261 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_100_61_0.415301588870538_6.16184710482214_1.03375211243225-2 chr9 113931455 113932128 + 1.03375211243225 NA intron (NM_013699, intron 2 of 15) GC_rich|Low_complexity|Low_complexity 857 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak1_101_61_0.429415169603787_6.16890389518877_1.03375211243225-2 chr19 6840211 6841070 + 1.03375211243225 NA promoter-TSS (NM_019924) promoter-TSS (NM_019924) -13 NM_019924 56613 Mm.20914 NM_019924 ENSMUSG00000024952 Rps6ka4 1110069D02Rik|90kDa|AI848992|Msk2|mMSK2 ribosomal protein S6 kinase, polypeptide 4 protein-coding common_peak1_101_61_0.429415169603787_6.16890389518877_1.03375211243225 chr16 22162437 22163483 + 1.03375211243225 NA exon (NM_183029, exon 1 of 16) exon (NM_183029, exon 1 of 16) 339 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding common_peak1_100_61_0.415301588870538_6.16184710482214_1.03375211243225 chr14 120275806 120277256 + 1.03375211243225 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) 862 NM_001360380 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak2_73_83_-0.468411661294563_6.15811159213148_1.03375211243224 chr4 154011406 154012588 + 1.03375211243224 NA exon (NM_201226, exon 1 of 7) exon (NM_201226, exon 1 of 7) 194 NM_201226 72946 Mm.260690 NM_201226 ENSMUSG00000029028 Lrrc47 2900010D03Rik|AA960559|mKIAA1185 leucine rich repeat containing 47 protein-coding common_peak1_73_83_-0.468411661294563_6.15811159213148_1.03375211243224 chr8 126735817 126736652 + 1.03375211243224 NA Intergenic Intergenic -112786 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-5 chr13 104447871 104448107 + 1.03275496310833 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 160154 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-23 chrX 152001469 152001675 + 1.03275496310833 NA promoter-TSS (NM_016763) promoter-TSS (NM_016763) -324 NM_016763 15108 Mm.6994 NM_016763 ENSMUSG00000025260 Hsd17b10 17bHSD10|Ads9|ERAB|Hadh2 hydroxysteroid (17-beta) dehydrogenase 10 protein-coding common_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-5 chr6 47921399 47921618 + 1.03275496310833 NA intron (NM_145576, intron 1 of 4) intron (NM_145576, intron 1 of 4) 940 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-4 chr6 91730831 91731024 + 1.03275496310833 NA intron (NM_009320, intron 5 of 14) intron (NM_009320, intron 5 of 14) 46860 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-13 chr3 151296291 151296491 + 1.03275496310833 NA Intergenic Intergenic -141491 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-9 chr7 37648767 37649004 + 1.03275496310833 NA intron (NM_172385, intron 3 of 5) intron (NM_172385, intron 3 of 5) 120867 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-13 chr8 25091881 25092216 + 1.03275496310833 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 9763 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-4 chr16 34959339 34959619 + 1.03275496310833 NA promoter-TSS (NR_045723) promoter-TSS (NR_045723) -485 NR_045723 278725 Mm.436927 NR_045722 E130310I04Rik A930019C19Rik RIKEN cDNA E130310I04 gene ncRNA unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-15 chr3 116024078 116024396 + 1.03275496310833 NA exon (NM_001163515, exon 2 of 4) exon (NM_001163515, exon 2 of 4) 15940 NM_001163514 58193 Mm.41739 NM_021388 ENSMUSG00000027963 Extl2 3000001D04Rik|AW146439 exostoses (multiple)-like 2 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-19 chr5 31577848 31578070 + 1.03275496310833 NA Intergenic YREP_Mm|Unknown|Unknown -6562 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-4 chr15 73616754 73616963 + 1.03275496310833 NA intron (NM_001033219, intron 1 of 7) intron (NM_001033219, intron 1 of 7) 466 NM_001357747 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-10 chr18 82503938 82504147 + 1.03275496310833 NA intron (NM_001025245, intron 2 of 3) intron (NM_001025245, intron 2 of 3) 28919 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-5 chr13 41863966 41864191 + 1.03275496310833 NA Intergenic Intergenic -1837 NR_033545 100038577 Mm.387093 NR_033545 ENSMUSG00000113856 Gm10790 - predicted gene 10790 ncRNA unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-3 chr12 14302200 14302436 + 1.03275496310833 NA Intergenic Charlie1a|DNA|hAT-Charlie 40784 NR_045003 791361 Mm.217963 NR_045003 ENSMUSG00000113336 Gm16497 - predicted gene 16497 ncRNA unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833 chr1 38626898 38627114 + 1.03275496310833 NA intron (NM_001290814, intron 1 of 21) CpG 238 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-4 chr2 167835103 167835324 + 1.03275496310833 NA Intergenic Intergenic -97114 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-5 chr12 17691516 17691754 + 1.03275496310833 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 826 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833 chr1 91300702 91300965 + 1.03275496310833 NA intron (NM_016717, intron 2 of 11) B1_Mus2|SINE|Alu 2495 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-10 chr5 125075030 125075229 + 1.03275496310833 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 71654 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-12 chr19 43498758 43498969 + 1.03275496310833 NA TTS (NM_010324) TTS (NM_010324) 25742 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-10 chr15 11530254 11530474 + 1.03275496310833 NA Intergenic Intergenic -130706 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-12 chr16 4602422 4602628 + 1.03275496310833 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 7812 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-14 chr8 110902212 110902418 + 1.03275496310833 NA intron (NR_052009, intron 1 of 23) intron (NR_052009, intron 1 of 23) 173 NM_172283 234730 Mm.102591 NM_172283 ENSMUSG00000033703 Fuk 1110046B12Rik|AI303278 fucokinase protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-4 chr12 108886391 108886625 + 1.03275496310833 NA intron (NM_001164488, intron 2 of 9) intron (NM_001164488, intron 2 of 9) 6690 NM_001164488 22375 Mm.38433 NM_011710 ENSMUSG00000021266 Wars TrpRS|WRS tryptophanyl-tRNA synthetase protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-6 chr3 88591527 88591746 + 1.03275496310833 NA Intergenic Intergenic 12028 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-9 chr18 6501067 6501261 + 1.03275496310833 NA intron (NM_007935, intron 1 of 13) intron (NM_007935, intron 1 of 13) -10307 NM_001276350 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833 chr10 12878918 12879118 + 1.03275496310833 NA Intergenic Intergenic -17283 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-2 chr1 71915440 71915645 + 1.03275496310833 NA Intergenic Intergenic 27430 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-2 chr10 7119559 7119748 + 1.03275496310833 NA 3' UTR (NM_172546, exon 13 of 13) 3' UTR (NM_172546, exon 13 of 13) 92584 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-15 chr5 125264707 125264939 + 1.03275496310833 NA Intergenic Intergenic 76271 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-10 chr7 73962048 73962266 + 1.03275496310833 NA intron (NM_009181, intron 4 of 5) intron (NM_009181, intron 4 of 5) 51525 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-6 chr12 102290274 102290474 + 1.03275496310833 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 6733 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-11 chr7 101934198 101934421 + 1.03275496310833 NA promoter-TSS (NM_027053) promoter-TSS (NM_027053) -452 NM_001162974 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding common_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833 chr10 68156312 68156588 + 1.03275496310833 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 122276 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-2 chr1 138570872 138571071 + 1.03275496310833 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 48786 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-21 chr7 65411737 65411956 + 1.03275496310833 NA Intergenic Intergenic -40602 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-4 chr2 131687209 131687435 + 1.03275496310833 NA Intergenic Intergenic -125037 NM_013460 11550 Mm.389380 NM_013460 ENSMUSG00000027335 Adra1d Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR adrenergic receptor, alpha 1d protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-6 chr14 69687187 69687399 + 1.03275496310833 NA intron (NM_033325, intron 10 of 13) intron (NM_033325, intron 10 of 13) -4955 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-9 chr5 136245579 136245795 + 1.03275496310833 NA promoter-TSS (NM_001302939) promoter-TSS (NM_001302939) -747 NM_018825 23921 Mm.425294 NM_018825 ENSMUSG00000005057 Sh2b2 Aps SH2B adaptor protein 2 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-23 chr9 45839878 45840092 + 1.03275496310833 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 1440 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-3 chr16 18409686 18409936 + 1.03275496310833 NA intron (NM_001111062, intron 5 of 5) intron (NM_001111062, intron 5 of 5) 3683 NM_001111063 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-3 chr2 24467959 24468197 + 1.03275496310833 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 7521 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-13 chr8 44939512 44939734 + 1.03275496310833 NA Intergenic Intergenic -10585 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-4 chr11 119041383 119041673 + 1.03275496310833 NA promoter-TSS (NM_013926) promoter-TSS (NM_013926) -615 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-21 chr5 111060221 111060464 + 1.03275496310833 NA intron (NM_001267622, intron 2 of 22) intron (NM_001267622, intron 2 of 22) 56198 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-5 chr13 60864652 60864867 + 1.03275496310833 NA promoter-TSS (NM_178098) promoter-TSS (NM_178098) -343 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-3 chr1 105430493 105430734 + 1.03275496310833 NA Intergenic Intergenic -73903 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-14 chr3 9739794 9740049 + 1.03275496310833 NA intron (NM_053182, intron 2 of 7) intron (NM_053182, intron 2 of 7) 93758 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-7 chr4 130662874 130663089 + 1.03275496310833 NA promoter-TSS (NM_001159604) promoter-TSS (NM_001159604) -340 NM_030722 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-5 chr1 162446667 162446892 + 1.03275496310833 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 31255 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-2 chr10 25791403 25791611 + 1.03275496310833 NA intron (NR_045349, intron 2 of 4) intron (NR_045349, intron 2 of 4) 45930 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-9 chr13 37963809 37964070 + 1.03275496310833 NA Intergenic Intergenic 30269 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-6 chr2 167878216 167878404 + 1.03275496310833 NA Intergenic Intergenic -54017 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-11 chr7 49545434 49545621 + 1.03275496310833 NA intron (NM_175272, intron 12 of 37) intron (NM_175272, intron 12 of 37) 91308 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-17 chr5 92377448 92377657 + 1.03275496310833 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -10582 NM_181728 109979 Mm.263514 NM_181728 ENSMUSG00000034842 Art3 4930569O04Rik|ARTC3 ADP-ribosyltransferase 3 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-7 chr15 73067853 73068148 + 1.03275496310833 NA Intergenic Intergenic -6796 NM_001164643 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-18 chr5 143669185 143669527 + 1.03275496310833 NA intron (NM_001163548, intron 1 of 12) intron (NM_001163548, intron 1 of 12) 18115 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-3 chr10 124139256 124139447 + 1.03275496310833 NA Intergenic Intergenic -329723 NR_028310 75030 Mm.159403 NR_028310 ENSMUSG00000112364 4930503E24Rik - eukaryotic translation initiation factor 3, subunit I pseudogene pseudo common_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-3 chr2 57652781 57652968 + 1.03275496310833 NA Intergenic Intergenic -345281 NM_172855 241391 Mm.484118 NM_172855 ENSMUSG00000026828 Galnt5 4832424J23 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding common_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-6 chr8 34529433 34529747 + 1.03275496310833 NA Intergenic RMER17C|LTR|ERVK 110726 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-17 chr8 24405587 24406019 + 1.03275496310833 NA Intergenic URR1B|DNA|hAT-Charlie 33143 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-22 chr7 109611580 109611811 + 1.03275496310833 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 4873 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-12 chr8 10629719 10629945 + 1.03275496310833 NA intron (NM_001319151, intron 34 of 34) intron (NM_001319151, intron 34 of 34) 252622 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-8 chr16 17810343 17810582 + 1.03275496310833 NA Intergenic Intergenic 13180 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding common_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-6 chrX 139871258 139871454 + 1.03275496310833 NA exon (NM_029413, exon 1 of 16) exon (NM_029413, exon 1 of 16) 298 NM_029413 75746 Mm.23269 NM_029413 ENSMUSG00000031434 Morc4 1600017G11Rik|5630401M14Rik|AA117449|Zcwcc2 microrchidia 4 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-11 chr4 132403333 132403577 + 1.03275496310833 NA intron (NM_001161797, intron 2 of 12) intron (NM_001161797, intron 2 of 12) 18991 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-11 chr8 120264782 120265000 + 1.03275496310833 NA Intergenic Intergenic -36661 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-6 chr17 44655102 44655318 + 1.03275496310833 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 80966 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-2 chr11 108267794 108268026 + 1.03275496310833 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 75978 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833 chr1 193390200 193390406 + 1.03275496310833 NA Intergenic Intergenic -20021 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-18 chr4 150238681 150238889 + 1.03275496310833 NA intron (NM_023119, intron 1 of 11) intron (NM_023119, intron 1 of 11) 1461 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-2 chr13 90798967 90799163 + 1.03275496310833 NA Intergenic Intergenic 106290 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-13 chr17 26113354 26113637 + 1.03275496310833 NA exon (NM_021793, exon 1 of 13) exon (NM_021793, exon 1 of 13) 179 NM_021793 60455 Mm.304656 NM_021793 ENSMUSG00000024180 Tmem8 AW490096|GPI-PLA2|M83|Pgap6|Tmem8a transmembrane protein 8 (five membrane-spanning domains) protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-4 chr13 33964983 33965231 + 1.03275496310833 NA intron (NM_001163239, intron 1 of 5) intron (NM_001163239, intron 1 of 5) 448 NM_001163241 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 N-ribosyldihydronicotinamide quinone reductase 2 protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-12 chr7 80774512 80774869 + 1.03275496310833 NA intron (NM_016721, intron 2 of 37) MTE2b|LTR|ERVL-MaLR 28641 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-5 chr19 24289754 24289958 + 1.03275496310833 NA Intergenic Intergenic -9270 NM_008044 14297 Mm.7319 NM_008044 ENSMUSG00000059363 Fxn FA|FARR|Frda|X25 frataxin protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-7 chr10 80104551 80104805 + 1.03275496310833 NA intron (NR_038088, intron 1 of 4) B1_Mus2|SINE|Alu -1976 NM_001359637 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-5 chr3 21569403 21569721 + 1.03275496310833 NA Intergenic Intergenic -507090 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-11 chr17 32965441 32965655 + 1.03275496310833 NA promoter-TSS (NM_153063) promoter-TSS (NM_153063) 168 NR_033585 77875 Mm.245027 NR_033585 Cyp4f41-ps 6030422M01Rik cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene pseudo unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-11 chr15 56853231 56853478 + 1.03275496310833 NA Intergenic Intergenic -158808 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-4 chr11 16816441 16816651 + 1.03275496310833 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 64343 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-15 chr19 3986606 3986811 + 1.03275496310833 NA intron (NM_001302481, intron 1 of 6) intron (NM_001302481, intron 1 of 6) 138 NM_001302482 71670 Mm.29735 NM_027857 ENSMUSG00000024866 Acy3 0610006H10Rik|AA3|AAIII|AW107362|Acy-3|HCBP1 aspartoacylase (aminoacylase) 3 protein-coding common_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833 chr2 152681495 152681737 + 1.03275496310833 NA 3' UTR (NM_001159553, exon 3 of 3) 3' UTR (NM_001159553, exon 3 of 3) -5532 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-16 chr6 37435496 37435765 + 1.03275496310833 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 6518 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-7 chr12 119238501 119238734 + 1.03275496310833 NA promoter-TSS (NM_177290) promoter-TSS (NM_177290) -341 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-7 chr17 34439088 34439295 + 1.03275496310833 NA intron (NM_001001177, intron 6 of 19) intron (NM_001001177, intron 6 of 19) 36746 NM_030746 632126 Mm.484958 NM_030746 ENSMUSG00000058435 Btnl4 Btn3a3|EG632126|NG11 butyrophilin-like 4 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-9 chr16 90915989 90916250 + 1.03275496310833 NA Intergenic Intergenic 18730 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-10 chr3 138104784 138105003 + 1.03275496310833 NA intron (NM_001355052, intron 17 of 21) intron (NM_001355052, intron 17 of 21) 26760 NM_008642 17777 Mm.2941 NM_008642 ENSMUSG00000028158 Mttp 1810043K16Rik|MTP microsomal triglyceride transfer protein protein-coding common_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-2 chr14 76932357 76932623 + 1.03275496310833 NA Intergenic Intergenic 104127 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-9 chr2 145839950 145840143 + 1.03275496310833 NA intron (NM_028724, intron 4 of 12) intron (NM_028724, intron 4 of 12) 53930 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833 chr1 92801384 92801621 + 1.03275496310833 NA Intergenic Intergenic -30143 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-8 chr4 141281593 141281816 + 1.03275496310833 NA Intergenic LFSINE_Vert|SINE|tRNA 3265 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-6 chr9 70259345 70259556 + 1.03275496310833 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 52100 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833 chr10 37141410 37141647 + 1.03275496310833 NA Intergenic Intergenic -2602 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-6 chr14 25469274 25469511 + 1.03275496310833 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 10207 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-20 chr5 52787338 52787539 + 1.03275496310833 NA intron (NM_030185, intron 3 of 11) intron (NM_030185, intron 3 of 11) 4383 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding common_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833 chr10 80116994 80117243 + 1.03275496310833 NA intron (NM_001301853, intron 1 of 8) intron (NM_001301853, intron 1 of 8) 1315 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833 chr1 184139456 184139646 + 1.03275496310833 NA Intergenic Intergenic 105170 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-2 chr2 167585511 167585730 + 1.03275496310833 NA Intergenic ID_B1|SINE|B4 46385 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-6 chr1 173913361 173913567 + 1.03275496310833 NA promoter-TSS (NM_001301745) promoter-TSS (NM_001301745) -418 NM_001033450 381308 Mm.490248 NM_001033450 ENSMUSG00000026536 Ifi211 A730048F03|Ifi205b|Mnda|ifi-205-B interferon activated gene 211 protein-coding common_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-5 chr7 4877146 4877335 + 1.03275496310833 NA intron (NM_001101598, intron 1 of 5) CpG 187 NM_001101598 664994 Mm.302624 NM_001101598 ENSMUSG00000086784 Isoc2a Isoc2 isochorismatase domain containing 2a protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-7 chr18 36504986 36505217 + 1.03275496310833 NA 3' UTR (NM_010415, exon 6 of 6) 3' UTR (NM_010415, exon 6 of 6) 10704 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-16 chr2 19683619 19683831 + 1.03275496310833 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 25663 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-12 chr2 151879450 151879663 + 1.03275496310833 NA Intergenic Intergenic -31651 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-7 chr4 137084508 137084751 + 1.03275496310833 NA Intergenic Intergenic -35934 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-16 chr5 4028405 4028607 + 1.03275496310833 NA exon (NM_194462, exon 22 of 48) exon (NM_194462, exon 22 of 48) 76191 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-14 chr9 63677913 63678100 + 1.03275496310833 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 75360 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-2 chr1 162453853 162454086 + 1.03275496310833 NA intron (NM_001038619, intron 1 of 20) (TAAG)n|Simple_repeat|Simple_repeat 24065 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-3 chr14 99537063 99537302 + 1.03275496310833 NA Intergenic Intergenic 238491 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-8 chr2 107228161 107228349 + 1.03275496310833 NA Intergenic Intergenic -62334 NM_021275 16492 Mm.142718 NM_021275 ENSMUSG00000042604 Kcna4 Kv1.4 potassium voltage-gated channel, shaker-related subfamily, member 4 protein-coding common_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-3 chr16 43700522 43700740 + 1.03275496310833 NA Intergenic Intergenic -36447 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-2 chr11 119856352 119856585 + 1.03275496310833 NA intron (NM_028898, intron 18 of 33) intron (NM_028898, intron 18 of 33) -22103 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-10 chr7 45707294 45707538 + 1.03275496310833 NA intron (NM_016974, intron 2 of 3) intron (NM_016974, intron 2 of 3) 2169 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-3 chr8 31803979 31804178 + 1.03275496310833 NA Intergenic Intergenic 114125 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-3 chr10 21694947 21695180 + 1.03275496310833 NA Intergenic Intergenic 4218 NR_045843 432436 Mm.244553 NM_001004162 ENSMUSG00000056716 Gm5420 EG432436 predicted gene 5420 ncRNA unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-13 chr2 125485378 125485579 + 1.03275496310833 NA intron (NM_007993, intron 2 of 65) intron (NM_007993, intron 2 of 65) 20960 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-14 chr5 111122643 111122846 + 1.03275496310833 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) 118600 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-17 chr4 147896038 147896267 + 1.03275496310833 NA intron (NM_001355590, intron 3 of 18) intron (NM_001355590, intron 3 of 18) 8509 NM_001355590 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-3 chr12 80385867 80386123 + 1.03275496310833 NA intron (NM_177267, intron 5 of 8) intron (NM_177267, intron 5 of 8) 5682 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-2 chr10 25427001 25427200 + 1.03275496310833 NA intron (NM_013511, intron 1 of 19) intron (NM_013511, intron 1 of 19) 18732 NM_013511 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833 chr11 97022129 97022383 + 1.03275496310833 NA non-coding (NR_133649, exon 1 of 2) non-coding (NR_133649, exon 1 of 2) 4162 NR_133649 100127433 Mm.156282 NR_133649 ENSMUSG00000087067 Gm11532 Sp6os predicted gene 11532 ncRNA unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-22 chr7 101969186 101969412 + 1.03275496310833 NA promoter-TSS (NM_133947) promoter-TSS (NM_133947) -544 NM_133947 101706 Mm.27259 NM_133947 ENSMUSG00000066306 Numa1 6720401E04Rik|AA764025|AL022610|AU014979|NuMA nuclear mitotic apparatus protein 1 protein-coding unique_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-11 chr18 82975615 82975844 + 1.03275496310833 NA intron (NM_183033, intron 2 of 5) intron (NM_183033, intron 2 of 5) -55169 NR_033307 75853 Mm.420737 NR_033307 4930592I03Rik - RIKEN cDNA 4930592I03 gene ncRNA unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833 chr1 33669491 33669723 + 1.03275496310833 NA promoter-TSS (NR_033199) promoter-TSS (NR_033199) 187 NM_008922 19076 Mm.27705 NM_008922 ENSMUSG00000026134 Prim2 AI323589 DNA primase, p58 subunit protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-9 chr15 59790082 59790322 + 1.03275496310833 NA intron (NR_045076, intron 2 of 3) intron (NR_045076, intron 2 of 3) 4757 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-8 chr11 51873960 51874241 + 1.03275496310833 NA Intergenic (A)n|Simple_repeat|Simple_repeat -16470 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-20 chr7 58733378 58733655 + 1.03275496310833 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 75314 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-6 chr3 127779607 127779878 + 1.03275496310833 NA intron (NM_027808, intron 1 of 13) intron (NM_027808, intron 1 of 13) 785 NM_027808 71481 Mm.158704 NM_027808 ENSMUSG00000028028 Alpk1 8430410J10Rik|LAK alpha-kinase 1 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-4 chr1 162100831 162101037 + 1.03275496310833 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 95965 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-3 chr10 96828769 96829032 + 1.03275496310833 NA Intergenic Intergenic -206868 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-4 chr10 81402937 81403136 + 1.03275496310833 NA intron (NM_026756, intron 8 of 8) MIRc|SINE|MIR -6539 NR_152732 102634174 Mm.392213 NR_152732 ENSMUSG00000085327 Gm16104 - predicted gene 16104 ncRNA unique_peak1_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-8 chr17 56717269 56717495 + 1.03275496310833 NA promoter-TSS (NM_178926) promoter-TSS (NM_178926) 317 NM_001166474 106639 Mm.37290 NM_178926 ENSMUSG00000054723 Vmac AI662250 vimentin-type intermediate filament associated coiled-coil protein protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-14 chr17 79825574 79825849 + 1.03275496310833 NA Intergenic Intergenic 70412 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-8 chr7 16524198 16524460 + 1.03275496310833 NA intron (NM_172739, intron 3 of 6) intron (NM_172739, intron 3 of 6) -47549 NM_008718 18142 Mm.145821 NM_008718 ENSMUSG00000001988 Npas1 MOP5|bHLHe11 neuronal PAS domain protein 1 protein-coding unique_peak2_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-12 chr9 70841799 70842020 + 1.03275496310833 NA intron (NM_001324473, intron 1 of 8) intron (NM_001324473, intron 1 of 8) 92899 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding unique_peak2_9_9_-0.265176172342444_3.18934000871614_1.03275496310833-8 chr13 24398107 24398321 + 1.03275496310833 NA intron (NM_001111110, intron 2 of 16) intron (NM_001111110, intron 2 of 16) -16908 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-19 chr6 54829426 54829717 + 1.03275496310833 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 12655 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-10 chr15 80559685 80559970 + 1.03275496310833 NA intron (NM_001163189, intron 1 of 5) PB1D10|SINE|Alu 643 NM_001163189 383075 Mm.297626 NM_001163189 ENSMUSG00000050439 Enthd1 Gm1242|Gm86 ENTH domain containing 1 protein-coding common_peak2_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-7 chr3 137748628 137748862 + 1.03275496310833 NA Intergenic Intergenic 34870 NR_105801 102466638 NR_105801 ENSMUSG00000099011 Mir6380 Gm27356|mmu-mir-6380 microRNA 6380 ncRNA common_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-5 chr17 31966409 31966653 + 1.03275496310833 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 67977 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding unique_peak1_10_9_-0.128642733143813_3.25760672831546_1.03275496310833-2 chr11 101829931 101830122 + 1.03275496310833 NA Intergenic Intergenic -44716 NM_001316365 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding common_peak1_10_8_0.0233603603012367_3.18160518159293_1.03275496310833-5 chr8 11477755 11477985 + 1.03275496310833 NA promoter-TSS (NR_126558) promoter-TSS (NR_126558) -59 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_148_95_0.34153489580411_6.75572994862321_1.03241865437677 chr18 60609120 60610779 + 1.03241865437677 NA 5' UTR (NM_001109975, exon 1 of 2) 5' UTR (NM_001109975, exon 1 of 2) 155 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_149_95_0.351116984085363_6.76052099276384_1.03241865437677 chr11 52332549 52333774 + 1.03241865437677 NA Intergenic Intergenic -27701 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_148_95_0.34153489580411_6.75572994862321_1.03241865437677 chr6 114968284 114969829 + 1.03241865437677 NA 5' UTR (NM_001356371, exon 1 of 6) 5' UTR (NM_001356371, exon 1 of 6) 147 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_115_122_-0.374656463535218_6.75518627357163_1.03241865437675 chr5 147860021 147861184 + 1.03241865437675 NA promoter-TSS (NM_025624) promoter-TSS (NM_025624) -26 NM_025624 66537 Mm.332855 NM_025624 ENSMUSG00000029649 Pomp 2510048O06Rik|Ump1 proteasome maturation protein protein-coding common_peak2_115_122_-0.374656463535218_6.75518627357163_1.03241865437675 chr11 3265828 3266954 + 1.03241865437675 NA promoter-TSS (NM_007879) promoter-TSS (NM_007879) 72 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|DRG-1|NEDD-3|Nedd3 developmentally regulated GTP binding protein 1 protein-coding common_peak1_259_175_0.264598515851962_7.59173087656328_1.03116530657796 chr7 45919363 45921731 + 1.03116530657796 NA intron (NM_010129, intron 1 of 4) intron (NM_010129, intron 1 of 4) 302 NM_001146346 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak2_119_74_0.387603895556761_6.42262063827426_1.03059905972714 chr9 61372567 61373416 + 1.03059905972714 NA 5' UTR (NM_001083927, exon 1 of 20) 5' UTR (NM_001083927, exon 1 of 20) 625 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_119_74_0.387603895556761_6.42262063827426_1.03059905972714 chr10 128547993 128549025 + 1.03059905972714 NA promoter-TSS (NM_134003) promoter-TSS (NM_134003) 659 NM_018860 67945 Mm.290786 NM_018860 ENSMUSG00000093674 Rpl41 1810055P16Rik|2210411K19Rik ribosomal protein L41 protein-coding common_peak1_159_103_0.32809228611085_6.86448586119652_1.03031222259992 chr11 117265636 117267696 + 1.03031222259992 NA intron (NM_001113487, intron 1 of 10) CpG 420 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_178_179_-0.302575523993167_7.34056533433309_1.02989575825237 chr16 11455087 11457136 + 1.02989575825237 NA intron (NM_028964, intron 13 of 20) intron (NM_028964, intron 13 of 20) 50463 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_156_159_-0.320510783862956_7.16167270295588_1.02955327044967 chr3 86141395 86142584 + 1.02955327044967 NA intron (NM_016959, intron 1 of 5) intron (NM_016959, intron 1 of 5) 679 NM_016959 20091 Mm.391785 NM_016959 ENSMUSG00000028081 Rps3a1 Rps3a ribosomal protein S3A1 protein-coding common_peak2_167_169_-0.31096619926481_7.2539078365053_1.02902294561733 chr7 127776589 127778562 + 1.02902294561733 NA intron (NM_178029, intron 1 of 18) CpG 186 NM_178029 233904 Mm.435494 NM_010940 ENSMUSG00000042308 Setd1a BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1 SET domain containing 1A protein-coding common_peak2_129_81_0.37353310944442_6.54431855934029_1.02896700973939 chr19 4126039 4126943 + 1.02896700973939 NA promoter-TSS (NM_016666) promoter-TSS (NM_016666) 531 NM_025889 66990 Mm.276255 NM_025889 Tmem134 2410001H17Rik|AI463452 transmembrane protein 134 protein-coding common_peak1_273_186_0.2522661346549_7.67302752721509_1.0288573315018 chr19 40252664 40254812 + 1.0288573315018 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 17878 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak1_318_219_0.235633686658627_7.89917655685397_1.02873338948412 chr3 130059284 130061788 + 1.02873338948412 NA intron (NM_207209, intron 1 of 23) CpG 371 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301-6 chr7 34917990 34918554 + 1.02859851787301 NA intron (NM_008820, intron 1 of 14) intron (NM_008820, intron 1 of 14) 5865 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding unique_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-3 chr15 6574026 6574737 + 1.02859851787301 NA Intergenic Intergenic -5466 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Fyb1|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-5 chr2 90564613 90565077 + 1.02859851787301 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 15802 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301 chr1 74505284 74505778 + 1.02859851787301 NA promoter-TSS (NM_021383) promoter-TSS (NM_021383) 290 NM_001310662 319651 Mm.66568 NM_176972 ENSMUSG00000033364 Usp37 4932415L06Rik|C330008N13Rik ubiquitin specific peptidase 37 protein-coding unique_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301 chr1 135535631 135536282 + 1.02859851787301 NA intron (NM_173437, intron 2 of 28) B1_Mus1|SINE|Alu 49399 NM_173437 215690 Mm.34977 NM_173437 ENSMUSG00000009418 Nav1 9530089B19|9930003A20Rik|C230080M11Rik|Gm38399|Pomfil3|Unc53h1|mKIAA1151|steerin-1 neuron navigator 1 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-6 chr2 148289516 148290100 + 1.02859851787301 NA Intergenic Intergenic -105569 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-7 chr6 61233866 61234447 + 1.02859851787301 NA intron (NM_183310, intron 1 of 10) intron (NM_183310, intron 1 of 10) -53346 NR_040287 100504262 Mm.438066 NR_040287 A730020E08Rik - RIKEN cDNA A730020E08 gene ncRNA common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-6 chr6 86195065 86195650 + 1.02859851787301 NA 5' UTR (NM_031199, exon 1 of 6) 5' UTR (NM_031199, exon 1 of 6) 130 NM_031199 21802 Mm.137222 NM_031199 ENSMUSG00000029999 Tgfa wa-1|wa1 transforming growth factor alpha protein-coding common_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301-4 chr5 146948725 146949050 + 1.02859851787301 NA exon (NM_025652, exon 1 of 9) exon (NM_025652, exon 1 of 9) 230 NM_025652 66596 Mm.196528 NM_025652 ENSMUSG00000016503 Gtf3a 2010015D03Rik|2610111I01Rik|5330403M05Rik general transcription factor III A protein-coding common_peak1_22_32_-0.794485837988955_4.64715120036398_1.02859851787301 chr17 79715214 79715713 + 1.02859851787301 NA promoter-TSS (NM_009994) promoter-TSS (NM_009994) -422 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-3 chr15 10748902 10749209 + 1.02859851787301 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 34155 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-7 chr9 58249998 58250543 + 1.02859851787301 NA promoter-TSS (NM_001311088) promoter-TSS (NM_001311088) -484 NM_178087 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding common_peak1_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-2 chr2 156065172 156065517 + 1.02859851787301 NA 5' UTR (NM_139151, exon 1 of 12) 5' UTR (NM_139151, exon 1 of 12) 131 NM_139151 245865 Mm.330713 NM_139151 ENSMUSG00000038180 Spag4 1700041K21Rik|MNCb-0953|Sun4|mKIAA4118 sperm associated antigen 4 protein-coding common_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301-5 chr6 89342797 89343310 + 1.02859851787301 NA intron (NM_008881, intron 4 of 31) intron (NM_008881, intron 4 of 31) 19560 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301 chr12 113155632 113155968 + 1.02859851787301 NA promoter-TSS (NM_134041) promoter-TSS (NM_134041) -621 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 Tedc1 4930427A07Rik|AA536649|mFLJ00116 tubulin epsilon and delta complex 1 protein-coding common_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301-2 chr18 66331863 66332090 + 1.02859851787301 NA Intergenic Intergenic -40138 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-4 chr16 37814076 37814409 + 1.02859851787301 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 37187 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-5 chr18 57029916 57030567 + 1.02859851787301 NA Intergenic Intergenic -54862 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-2 chr14 20809803 20810150 + 1.02859851787301 NA Intergenic Intergenic 15737 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA unique_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301 chr15 3579523 3580056 + 1.02859851787301 NA intron (NM_001048178, intron 1 of 8) intron (NM_001048178, intron 1 of 8) 2053 NM_001286370 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding common_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301 chr1 182528259 182528549 + 1.02859851787301 NA Intergenic Intergenic -10794 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_38_19_0.684445681795206_4.66415093578497_1.02859851787301-3 chr2 60870854 60871070 + 1.02859851787301 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 10476 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-3 chr15 95370073 95370468 + 1.02859851787301 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 157744 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-8 chr7 128362809 128363283 + 1.02859851787301 NA Intergenic Intergenic 55126 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding unique_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-4 chr3 27640681 27641313 + 1.02859851787301 NA intron (NM_001356953, intron 3 of 26) intron (NM_001356953, intron 3 of 26) -56002 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-5 chr3 69003875 69004344 + 1.02859851787301 NA promoter-TSS (NM_133786) promoter-TSS (NM_133786) 461 NM_026641 68259 Mm.389451 NM_026641 ENSMUSG00000027778 Ift80 4921524P20Rik|Wdr56|mKIAA1374 intraflagellar transport 80 protein-coding unique_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-2 chr10 13553300 13553688 + 1.02859851787301 NA promoter-TSS (NM_001347361) promoter-TSS (NM_001347361) -352 NM_001347361 56535 Mm.282711 NM_019961 ENSMUSG00000019809 Pex3 1700014F15Rik|2810027F19Rik|2900010N04Rik peroxisomal biogenesis factor 3 protein-coding common_peak1_38_19_0.684445681795206_4.66415093578497_1.02859851787301-2 chr1 90225942 90226518 + 1.02859851787301 NA Intergenic MER103C|DNA|hAT-Charlie 22250 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301 chr1 106718867 106719141 + 1.02859851787301 NA Intergenic Intergenic -4714 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_22_32_-0.794485837988955_4.64715120036398_1.02859851787301-4 chr17 26607343 26607676 + 1.02859851787301 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 45997 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_84_50_0.450007434545591_5.89742905924429_1.0282429674257-2 chr8 33896633 33897162 + 1.0282429674257 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 32966 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_84_50_0.450007434545591_5.89742905924429_1.0282429674257 chr4 83309225 83309692 + 1.0282429674257 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 14731 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_84_50_0.450007434545591_5.89742905924429_1.0282429674257 chr14 54426206 54427400 + 1.0282429674257 NA promoter-TSS (NM_026851) promoter-TSS (NM_026851) -106 NM_026851 68836 Mm.248163 NM_026851 ENSMUSG00000010406 Mrpl52 1110047B07Rik mitochondrial ribosomal protein L52 protein-coding common_peak1_85_50_0.466762208664694_5.90580644630384_1.0282429674257 chr4 128957166 128958445 + 1.0282429674257 NA intron (NM_001301841, intron 2 of 8) MIRb|SINE|MIR 4650 NM_172875 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding common_peak1_85_50_0.466762208664694_5.90580644630384_1.0282429674257-2 chr6 83077827 83078670 + 1.0282429674257 NA promoter-TSS (NM_197992) promoter-TSS (NM_197992) -142 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding common_peak2_60_70_-0.502591050201806_5.89845159440378_1.02824296742569 chr4 148037812 148038799 + 1.02824296742569 NA promoter-TSS (NM_010840) promoter-TSS (NM_010840) 508 NM_011929 26372 Mm.89987 NM_011929 ENSMUSG00000029016 Clcn6 AI850629|Clc6 chloride channel, voltage-sensitive 6 protein-coding common_peak1_60_70_-0.502591050201806_5.89845159440378_1.02824296742569 chr11 53430239 53430744 + 1.02824296742569 NA intron (NM_025352, intron 1 of 1) CpG 340 NM_025352 22272 Mm.251621 NM_025352 ENSMUSG00000044894 Uqcrq 1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502 ubiquinol-cytochrome c reductase, complex III subunit VII protein-coding common_peak1_60_70_-0.502591050201806_5.89845159440378_1.02824296742569-2 chr4 126132432 126133159 + 1.02824296742569 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -15208 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak1_232_156_0.2723436856627_7.43079259172298_1.02769983743422 chr2 91068348 91070198 + 1.02769983743422 NA intron (NM_001290765, intron 1 of 9) intron (NM_001290765, intron 1 of 9) 1042 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak2_215_212_-0.276272728472168_7.59657325598975_1.02739083492185 chr8 80737856 80739437 + 1.02739083492185 NA intron (NM_053124, intron 1 of 23) CpG 813 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak1_350_243_0.223197684428103_8.04233617977694_1.02726619520852 chr6 31098210 31102172 + 1.02726619520852 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -37098 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_42_52_-0.581677924353767_5.43708149238632_1.02702006187975 chr11 120629689 120630587 + 1.02702006187975 NA intron (NM_010756, intron 1 of 2) intron (NM_010756, intron 1 of 2) 3409 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_42_52_-0.581677924353767_5.43708149238632_1.02702006187975 chr13 6418096 6418877 + 1.02702006187975 NA Intergenic Intergenic -129671 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak1_42_52_-0.581677924353767_5.43708149238632_1.02702006187975-2 chr13 32498103 32498821 + 1.02702006187975 NA Intergenic Intergenic -159918 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_41_52_-0.615385758543819_5.42022757529129_1.02702006187975 chr2 180119394 180120004 + 1.02702006187975 NA intron (NM_144500, intron 1 of 13) CpG 333 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding common_peak2_41_52_-0.615385758543819_5.42022757529129_1.02702006187975-2 chr7 82070397 82070929 + 1.02702006187975 NA intron (NR_045744, intron 1 of 3) intron (NR_045744, intron 1 of 3) 276 NR_045744 434205 Mm.333986 NR_045744 ENSMUSG00000109145 Gm20744 - predicted gene, 20744 ncRNA common_peak2_42_52_-0.581677924353767_5.43708149238632_1.02702006187975-2 chr2 129199809 129200389 + 1.02702006187975 NA intron (NM_015747, intron 2 of 10) intron (NM_015747, intron 2 of 10) 1326 NM_001159593 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_42_52_-0.581677924353767_5.43708149238632_1.02702006187975-4 chr7 46710051 46710711 + 1.02702006187975 NA intron (NM_030233, intron 1 of 11) CpG 270 NM_030233 78935 Mm.289866 NM_030233 ENSMUSG00000006763 Saal1 5031425D22Rik|SPACIA1 serum amyloid A-like 1 protein-coding common_peak2_42_52_-0.581677924353767_5.43708149238632_1.02702006187975-3 chr7 28586847 28587755 + 1.02702006187975 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 10883 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding common_peak1_62_35_0.523445296804522_5.43164764984457_1.02702006187974-2 chr17 87265470 87265843 + 1.02702006187974 NA intron (NM_176808, intron 1 of 4) CpG 291 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding common_peak1_62_35_0.523445296804522_5.43164764984457_1.02702006187974-4 chr8 61269971 61270662 + 1.02702006187974 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) 18556 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak2_62_35_0.523445296804522_5.43164764984457_1.02702006187974-2 chr9 14500739 14501240 + 1.02702006187974 NA promoter-TSS (NM_173433) promoter-TSS (NM_173433) 370 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding common_peak2_62_35_0.523445296804522_5.43164764984457_1.02702006187974 chr3 113952599 113953076 + 1.02702006187974 NA Intergenic Intergenic -77703 NM_007729 12814 Mm.209715 NM_007729 ENSMUSG00000027966 Col11a1 C530001D20Rik|cho collagen, type XI, alpha 1 protein-coding common_peak1_62_35_0.523445296804522_5.43164764984457_1.02702006187974-3 chr19 6045970 6046394 + 1.02702006187974 NA promoter-TSS (NM_028769) promoter-TSS (NM_028769) -394 NM_028769 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak1_62_35_0.523445296804522_5.43164764984457_1.02702006187974 chr14 57759304 57759994 + 1.02702006187974 NA Intergenic Intergenic -13526 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding unique_peak1_62_35_0.523445296804522_5.43164764984457_1.02702006187974 chr15 25843342 25843965 + 1.02702006187974 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 355 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak2_110_68_0.396216906933484_6.30663291024491_1.02602930452879-2 chr4 129058198 129059488 + 1.02602930452879 NA exon (NM_029219, exon 1 of 9) exon (NM_029219, exon 1 of 9) 572 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_110_68_0.396216906933484_6.30663291024491_1.02602930452879 chr10 18470822 18471595 + 1.02602930452879 NA intron (NM_001163592, intron 1 of 7) intron (NM_001163592, intron 1 of 7) 1227 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding common_peak1_110_68_0.396216906933484_6.30663291024491_1.02602930452879 chr8 72723330 72724124 + 1.02602930452879 NA intron (NM_001113248, intron 1 of 6) CpG 457 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding common_peak1_82_91_-0.435238335166095_6.30594278847397_1.02602930452876 chr9 14784097 14785191 + 1.02602930452876 NA promoter-TSS (NM_001310728) promoter-TSS (NM_001310728) -10 NM_001310728 17535 Mm.149071 NM_018736 ENSMUSG00000031928 Mre11a Mre11|Mre11b MRE11A homolog A, double strand break repair nuclease protein-coding common_peak2_117_123_-0.36185020463744_6.77327120806815_1.02570497493437 chr8 107488721 107489855 + 1.02570497493437 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) 52890 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_157_160_-0.320404191412584_7.17071478240833_1.02449203946321 chr1 85793479 85795390 + 1.02449203946321 NA intron (NM_001355047, intron 1 of 9) CpG 417 NM_001355047 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_93_56_0.433716309564069_6.04974816894678_1.0240665209794-2 chr4 89457819 89458637 + 1.0240665209794 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -147196 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_93_56_0.433716309564069_6.04974816894678_1.0240665209794 chr17 87570500 87571497 + 1.0240665209794 NA Intergenic Intergenic -64981 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding common_peak2_67_77_-0.482626341099041_6.04408904831273_1.0240665209794 chr1 37996593 37997191 + 1.0240665209794 NA intron (NM_172054, intron 1 of 4) intron (NM_172054, intron 1 of 4) 316 NM_172054 98258 Mm.28438 NM_172054 ENSMUSG00000058407 Txndc9 AI098020|APACD thioredoxin domain containing 9 protein-coding common_peak1_67_77_-0.482626341099041_6.04408904831273_1.0240665209794 chr10 7956406 7957063 + 1.0240665209794 NA promoter-TSS (NM_138667) promoter-TSS (NM_138667) -611 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_67_77_-0.482626341099041_6.04408904831273_1.0240665209794-2 chr12 80113281 80114490 + 1.0240665209794 NA promoter-TSS (NM_007564) promoter-TSS (NM_007564) -872 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak2_93_56_0.433716309564069_6.04974816894678_1.0240665209794 chr8 31300190 31301102 + 1.0240665209794 NA Intergenic Intergenic -67103 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_67_77_-0.482626341099041_6.04408904831273_1.0240665209794-3 chr17 51178506 51179204 + 1.0240665209794 NA intron (NM_028162, intron 1 of 21) CpG 497 NM_028162 72238 Mm.120650 NM_028162 ENSMUSG00000023923 Tbc1d5 1600014N05Rik TBC1 domain family, member 5 protein-coding common_peak1_67_77_-0.482626341099041_6.04408904831273_1.0240665209794-4 chr2 30048931 30049367 + 1.0240665209794 NA promoter-TSS (NM_001008498) promoter-TSS (NM_001008498) -270 NM_001008498 71820 Mm.88053 NM_001008498 ENSMUSG00000039715 Wdr34 3200002I06Rik WD repeat domain 34 protein-coding common_peak1_67_77_-0.482626341099041_6.04408904831273_1.0240665209794-5 chr3 138526518 138526925 + 1.0240665209794 NA promoter-TSS (NM_001313980) promoter-TSS (NM_001313980) 300 NR_035481 100316706 NR_035481 ENSMUSG00000088373 Mir1956 mir-1956|mmu-mir-1956 microRNA 1956 ncRNA common_peak2_54_64_-0.523535511677515_5.7606000571897_1.02389270236921 chr13 5346049 5347014 + 1.02389270236921 NA Intergenic Intergenic 511561 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_54_64_-0.523535511677515_5.7606000571897_1.02389270236921-2 chr6 112872553 112873772 + 1.02389270236921 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 74104 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_54_64_-0.523535511677515_5.7606000571897_1.02389270236921 chr8 26361871 26362526 + 1.02389270236921 NA Intergenic Intergenic 204029 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak2_77_45_0.475756841052311_5.76144037658317_1.0238927023692 chr7 24462473 24463054 + 1.0238927023692 NA intron (NM_011113, intron 1 of 6) MIR|SINE|MIR 280 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak2_75_84_-0.447282461165799_6.1857497055548_1.02363719616722-3 chr8 34154578 34155141 + 1.02363719616722 NA intron (NM_026432, intron 1 of 5) CpG 296 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak2_74_84_-0.466256471757939_6.17626270025873_1.02363719616722 chr17 84110405 84111410 + 1.02363719616722 NA Intergenic Intergenic 32247 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_75_84_-0.447282461165799_6.1857497055548_1.02363719616722 chr17 80885339 80886418 + 1.02363719616722 NA Intergenic Intergenic -10915 NR_131128 320784 Mm.474182 NR_131127 ENSMUSG00000112121 C230072F16Rik - RIKEN cDNA C230072F16 gene ncRNA common_peak2_75_84_-0.447282461165799_6.1857497055548_1.02363719616722-2 chr6 29347530 29348726 + 1.02363719616722 NA promoter-TSS (NM_184053) promoter-TSS (NM_184053) 22 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak1_70_40_0.507068737088647_5.61108637316241_1.02303743263849 chr17 45795504 45796544 + 1.02303743263849 NA Intergenic Intergenic 61518 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_48_58_-0.549284905995787_5.60800059636395_1.02303743263849 chr1 40173609 40174189 + 1.02303743263849 NA Intergenic Intergenic -51181 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_70_40_0.507068737088647_5.61108637316241_1.02303743263849 chr5 115157348 115158159 + 1.02303743263849 NA intron (NM_175403, intron 1 of 4) CpG 423 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_108_115_-0.379286109999126_6.66833794012801_1.0225571882954 chr10 67096009 67097512 + 1.0225571882954 NA intron (NM_178606, intron 1 of 7) CpG 228 NM_001204915 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak1_140_89_0.355588829626591_6.66964751114297_1.0225571882954 chr8 36822710 36823608 + 1.0225571882954 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -90105 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_91_99_-0.408057867551713_6.43982725599887_1.02215905955929 chr16 97851078 97851949 + 1.02215905955929 NA promoter-TSS (NM_144789) promoter-TSS (NM_144789) -286 NM_144789 114604 Mm.328741 NM_144789 ENSMUSG00000014039 Prdm15 C21orf83|E130018M06Rik|ORF62|Zfp298 PR domain containing 15 protein-coding common_peak2_90_99_-0.423713945318726_6.43199921711536_1.02215905955929 chr12 69183602 69184869 + 1.02215905955929 NA promoter-TSS (NM_025589) promoter-TSS (NM_025589) 77 NM_146035 217664 Mm.206642 NM_146035 ENSMUSG00000043998 Mgat2 AA407964|CDGS2|GLCNACTII|GNT-II|GNT2 mannoside acetylglucosaminyltransferase 2 protein-coding common_peak1_120_75_0.380383247532739_6.43811913720995_1.02215905955929 chr8 121630958 121631934 + 1.02215905955929 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 20487 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-5 chr17 27056882 27057135 + 1.0220094258199 NA promoter-TSS (NM_080553) promoter-TSS (NM_080553) -296 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-8 chr2 131911500 131911897 + 1.0220094258199 NA intron (NM_001278256, intron 1 of 3) intron (NM_001278256, intron 1 of 3) 1770 NM_001278256 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-8 chr13 32297788 32298247 + 1.0220094258199 NA intron (NM_146041, intron 1 of 10) intron (NM_146041, intron 1 of 10) 40527 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-21 chr6 142191380 142191705 + 1.0220094258199 NA Intergenic Intergenic -5393 NM_023718 28254 Mm.38953 NM_023718 ENSMUSG00000079262 Slco1a6 4930422F19Rik|AI790453|Oatp-5|Oatp5|Slc21a13 solute carrier organic anion transporter family, member 1a6 protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-3 chr16 31603501 31603980 + 1.0220094258199 NA Intergenic Intergenic -14393 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-13 chr19 4809728 4810120 + 1.0220094258199 NA intron (NM_019869, intron 1 of 2) intron (NM_019869, intron 1 of 2) 1710 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199-3 chr14 55672553 55672811 + 1.0220094258199 NA promoter-TSS (NM_008683) promoter-TSS (NM_008683) 447 NM_177992 105446 Mm.390685 NM_177992 ENSMUSG00000002326 Gmpr2 1810008P16Rik|5730544D12Rik|AA959850|GMPR 2 guanosine monophosphate reductase 2 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-2 chr10 127665748 127666179 + 1.0220094258199 NA intron (NM_008668, intron 1 of 6) intron (NM_008668, intron 1 of 6) 740 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-7 chr12 84187951 84188449 + 1.0220094258199 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 5815 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-4 chr15 101374830 101375057 + 1.0220094258199 NA Intergenic Intergenic -4818 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-6 chr11 116682522 116682861 + 1.0220094258199 NA intron (NM_009180, intron 5 of 8) intron (NM_009180, intron 5 of 8) 8094 NR_028570 100216538 NR_028570 ENSMUSG00000065094 Snord1a snR38 small nucleolar RNA, C/D box 1A snoRNA unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-20 chr4 116508007 116508400 + 1.0220094258199 NA intron (NM_008389, intron 1 of 8) intron (NM_008389, intron 1 of 8) 654 NM_008389 16351 Mm.1350 NM_008389 ENSMUSG00000028696 Ipp D4Jhu8|Mipp IAP promoted placental gene protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-11 chr7 67971493 67971819 + 1.0220094258199 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 19399 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-27 chrX 103617534 103617936 + 1.0220094258199 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 6019 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-16 chr2 154510635 154511078 + 1.0220094258199 NA intron (NM_172860, intron 4 of 10) intron (NM_172860, intron 4 of 10) -38048 NM_029305 75480 Mm.440434 NM_029305 ENSMUSG00000038523 1700003F12Rik - RIKEN cDNA 1700003F12 gene protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-5 chr2 132815553 132815983 + 1.0220094258199 NA promoter-TSS (NM_025676) promoter-TSS (NM_025676) 286 NM_175113 66926 Mm.34199 NM_175113 ENSMUSG00000037376 Trmt6 3300001M20Rik|AU016412|AW492787|CGI-09|mKIAA1153 tRNA methyltransferase 6 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199 chr1 43142892 43143220 + 1.0220094258199 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 20905 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-18 chr3 90584262 90584712 + 1.0220094258199 NA promoter-TSS (NM_001355597) promoter-TSS (NM_001355597) -172 NM_001355597 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-11 chr14 67923433 67923932 + 1.0220094258199 NA intron (NM_177780, intron 1 of 51) L2a|LINE|L2 9890 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-22 chr7 144023842 144024586 + 1.0220094258199 NA Intergenic Intergenic 14960 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-10 chr6 94647919 94648236 + 1.0220094258199 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -41662 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-8 chr6 91488499 91488995 + 1.0220094258199 NA TTS (NM_028766) TTS (NM_028766) 14996 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199 chr1 74034236 74034673 + 1.0220094258199 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 89993 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199-6 chr8 35864817 35865158 + 1.0220094258199 NA non-coding (NR_046181, exon 3 of 3) non-coding (NR_046181, exon 3 of 3) 17970 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199-7 chrX 71556122 71556465 + 1.0220094258199 NA intron (NM_001293623, intron 1 of 4) CpG 376 NM_001293625 15354 Mm.336087 NM_008253 ENSMUSG00000015217 Hmgb3 Hmg2a|Hmg4 high mobility group box 3 protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-7 chr6 55437062 55437534 + 1.0220094258199 NA Intergenic Intergenic -14680 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-3 chr11 6476170 6476658 + 1.0220094258199 NA promoter-TSS (NM_011221) promoter-TSS (NM_011221) -338 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-5 chr17 75250768 75251185 + 1.0220094258199 NA intron (NM_019919, intron 8 of 33) intron (NM_019919, intron 8 of 33) 72195 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-25 chr8 93981250 93981657 + 1.0220094258199 NA intron (NM_011787, intron 9 of 13) PB1D11|SINE|Alu 31187 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-6 chr4 136806982 136807496 + 1.0220094258199 NA intron (NM_010142, intron 1 of 15) intron (NM_010142, intron 1 of 15) 28773 NM_001290753 13844 Mm.250981 NM_010142 ENSMUSG00000028664 Ephb2 Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5 Eph receptor B2 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-14 chr19 5988110 5988549 + 1.0220094258199 NA TTS (NM_007600) TTS (NM_007600) -2186 NM_198650 381203 Mm.329638 NM_198650 ENSMUSG00000037451 Slc22a20 Gm963|OAT1-L|mOAT6 solute carrier family 22 (organic anion transporter), member 20 protein-coding common_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-6 chr2 60545559 60545919 + 1.0220094258199 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 7569 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-9 chr2 167574562 167574969 + 1.0220094258199 NA Intergenic Intergenic 36570 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-2 chr12 70695767 70696040 + 1.0220094258199 NA Intergenic Intergenic -129611 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_15_24_-0.913816145556928_4.18694811699626_1.0220094258199 chr4 89445584 89445818 + 1.0220094258199 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -134669 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-4 chr17 26939825 26940187 + 1.0220094258199 NA promoter-TSS (NM_026307) promoter-TSS (NM_026307) -468 NM_026307 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-17 chr2 168082092 168082405 + 1.0220094258199 NA intron (NM_021409, intron 1 of 2) intron (NM_021409, intron 1 of 2) 1244 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-4 chr8 25536930 25537163 + 1.0220094258199 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 18287 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-2 chr1 134087394 134087818 + 1.0220094258199 NA Intergenic B1_Mus1|SINE|Alu -8451 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-24 chr8 92355048 92355338 + 1.0220094258199 NA intron (NR_110452, intron 1 of 3) intron (NR_110452, intron 1 of 3) 927 NR_110452 71296 Mm.86664 NR_033641 ENSMUSG00000031736 Crnde 4933436C20Rik colorectal neoplasia differentially expressed (non-protein coding) ncRNA common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-7 chr19 27364354 27364677 + 1.0220094258199 NA Intergenic MamRep605|LTR?|LTR? 41896 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199-4 chr5 101216917 101217293 + 1.0220094258199 NA Intergenic Intergenic 370876 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding common_peak1_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-3 chr6 47595290 47595653 + 1.0220094258199 NA promoter-TSS (NM_001146689) promoter-TSS (NM_001146689) -441 NM_007971 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-12 chr16 97286453 97286908 + 1.0220094258199 NA Intergenic Intergenic -70048 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-19 chr4 48577558 48577888 + 1.0220094258199 NA Intergenic Intergenic -7451 NM_001356272 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-2 chr15 66863018 66863371 + 1.0220094258199 NA Intergenic Intergenic -28199 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-3 chr12 106010546 106010889 + 1.0220094258199 NA intron (NM_001029843, intron 1 of 13) CpG 454 NM_001029843 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-5 chr11 100962173 100962447 + 1.0220094258199 NA TTS (NM_001359105) TTS (NM_001359105) 8305 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-23 chr8 31526811 31527164 + 1.0220094258199 NA Intergenic Intergenic 159238 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-10 chr7 19000643 19001045 + 1.0220094258199 NA exon (NM_145579, exon 3 of 3) exon (NM_145579, exon 3 of 3) -3221 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-3 chr13 37783776 37784241 + 1.0220094258199 NA Intergenic Intergenic -42030 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199 chr3 89288381 89288598 + 1.0220094258199 NA Intergenic Intergenic -7538 NM_001162425 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak1_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-2 chr5 143528229 143528445 + 1.0220094258199 NA promoter-TSS (NM_009007) promoter-TSS (NM_009007) -306 NM_001347530 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199-5 chr5 143731732 143732051 + 1.0220094258199 NA intron (NM_029749, intron 1 of 17) CpG 389 NM_029749 76800 Mm.259620 NM_029749 ENSMUSG00000051306 Usp42 2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e ubiquitin specific peptidase 42 protein-coding common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199 chr10 95336943 95337246 + 1.0220094258199 NA intron (NR_045337, intron 1 of 2) intron (NR_045337, intron 1 of 2) 818 NR_045337 69629 Mm.250542 NR_045337 ENSMUSG00000100550 2310039L15Rik A53T-syn|G2-3|PrPsynA53T|Tg(Prnp-SNCA*A53T)23Mkle RIKEN cDNA 2310039L15 gene ncRNA unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-26 chr8 108759290 108759735 + 1.0220094258199 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 44868 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-6 chr19 7493844 7494196 + 1.0220094258199 NA promoter-TSS (NM_146091) promoter-TSS (NM_146091) -20 NM_001163505 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding common_peak2_28_13_0.774613078892906_4.19466146150406_1.0220094258199-2 chr11 120098405 120098630 + 1.0220094258199 NA promoter-TSS (NM_001110242) promoter-TSS (NM_001110242) 214 NM_183137 78777 Mm.23672 NM_183137 ENSMUSG00000025377 Tepsin 2410002I01Rik|Enthd2 TEPSIN, adaptor related protein complex 4 accessory protein protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-15 chr19 47891714 47892029 + 1.0220094258199 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 26077 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-9 chr14 20675513 20675848 + 1.0220094258199 NA intron (NM_172596, intron 1 of 22) intron (NM_172596, intron 1 of 22) 1359 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199 chr1 44568098 44568438 + 1.0220094258199 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 16597 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-4 chr19 43560689 43561069 + 1.0220094258199 NA Intergenic Intergenic -36274 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199 chr13 95527209 95527761 + 1.0220094258199 NA Intergenic Intergenic -2245 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-4 chr11 54112500 54112808 + 1.0220094258199 NA intron (NM_001136076, intron 5 of 15) intron (NM_001136076, intron 5 of 15) 11730 NM_011031 18452 Mm.3705 NM_011031 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide protein-coding unique_peak2_15_24_-0.913816145556928_4.18694811699626_1.0220094258199-9 chr7 3293137 3293402 + 1.0220094258199 NA 5' UTR (NM_016969, exon 2 of 3) 5' UTR (NM_016969, exon 2 of 3) 241 NM_001093766 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding unique_peak1_28_13_0.774613078892906_4.19466146150406_1.0220094258199-10 chr14 52278836 52279291 + 1.0220094258199 NA promoter-TSS (NM_023434) promoter-TSS (NM_023434) -83 NM_023434 268741 Mm.246237 NM_023434 ENSMUSG00000016831 Tox4 5730589K01Rik|A630040M18|AA410149|LCP1 TOX high mobility group box family member 4 protein-coding common_peak2_230_225_-0.265563887589789_7.68739701862029_1.02178910742289 chr19 56547814 56549338 + 1.02178910742289 NA promoter-TSS (NM_018831) promoter-TSS (NM_018831) 315 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak1_130_82_0.367022877095466_6.55855086989466_1.02121829519543 chr15 61987451 61988363 + 1.02121829519543 NA exon (NM_010849, exon 2 of 3) exon (NM_010849, exon 2 of 3) 2566 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak2_99_107_-0.399643619584404_6.55506569237127_1.0212182951954 chr19 16922159 16923131 + 1.0212182951954 NA Intergenic Intergenic -33473 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_99_107_-0.399643619584404_6.55506569237127_1.0212182951954-2 chr6 17693831 17694814 + 1.0212182951954 NA exon (NM_001289626, exon 1 of 15) exon (NM_001289626, exon 1 of 15) 328 NM_001289625 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding common_peak2_99_107_-0.399643619584404_6.55506569237127_1.0212182951954-4 chr8 70649595 70650399 + 1.0212182951954 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 9741 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_99_107_-0.399643619584404_6.55506569237127_1.0212182951954-3 chr6 52211785 52213225 + 1.0212182951954 NA intron (NR_015611, intron 2 of 2) intron (NR_015611, intron 2 of 2) 562 NM_010452 15400 Mm.71533 NM_010452 ENSMUSG00000079560 Hoxa3 Hox-1.5|Mo-10 homeobox A3 protein-coding common_peak2_180_181_-0.30260005014057_7.35649461512841_1.02100407334832 chr15 99392992 99393967 + 1.02100407334832 NA intron (NM_001171035, intron 1 of 9) CpG 260 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_18_28_-0.88176256100918_4.41709971462298_1.02077663956385 chr12 17184473 17184757 + 1.02077663956385 NA Intergenic Intergenic -7727 NM_201531 382571 Mm.40173 NM_201531 ENSMUSG00000051726 Kcnf1 Gm1182|Kv5.1 potassium voltage-gated channel, subfamily F, member 1 protein-coding common_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-4 chr9 96631696 96632035 + 1.02077663956385 NA promoter-TSS (NM_053268) promoter-TSS (NM_053268) -362 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding unique_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-4 chr4 45018633 45019032 + 1.02077663956385 NA intron (NM_022811, intron 1 of 11) CpG 223 NM_001285800 64424 Mm.282932 NM_022811 ENSMUSG00000028318 Polr1e 53kDa|AU042259|D030019D19Rik|Paf53|Praf1 polymerase (RNA) I polypeptide E protein-coding unique_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-6 chr6 91712134 91712610 + 1.02077663956385 NA intron (NM_009320, intron 2 of 14) intron (NM_009320, intron 2 of 14) 28305 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385 chr15 99888944 99889356 + 1.02077663956385 NA Intergenic ID_B1|SINE|B4 -13694 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-3 chr9 15357274 15357648 + 1.02077663956385 NA intron (NM_176976, intron 1 of 26) intron (NM_176976, intron 1 of 26) 327 NM_176976 319675 Mm.218317 NM_176976 ENSMUSG00000046111 Cep295 5830418K08Rik|5832426L23Rik|Gm1131|Kiaa1731 centrosomal protein 295 protein-coding unique_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-3 chr19 10697749 10698243 + 1.02077663956385 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) -2772 NM_001361964 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding unique_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-5 chr5 135488666 135489185 + 1.02077663956385 NA intron (NM_146001, intron 1 of 30) CpG 56197 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-2 chr8 109765801 109766177 + 1.02077663956385 NA Intergenic Intergenic -12594 NM_009677 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding unique_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385 chr12 65075635 65076122 + 1.02077663956385 NA exon (NM_178912, exon 1 of 23) exon (NM_178912, exon 1 of 23) 272 NM_178912 104806 Mm.374847 NM_178912 ENSMUSG00000055884 Fancm AI427100|C730036B14Rik|D12Ertd364e Fanconi anemia, complementation group M protein-coding unique_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-2 chr15 77794888 77795461 + 1.02077663956385 NA intron (NM_022410, intron 5 of 40) intron (NM_022410, intron 5 of 40) -38164 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak2_18_28_-0.88176256100918_4.41709971462298_1.02077663956385-2 chr6 84271638 84272059 + 1.02077663956385 NA Intergenic Intergenic 151990 NR_046063 100038556 Mm.387783 NR_046063 ENSMUSG00000107797 Gm10445 - predicted gene 10445 ncRNA common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-6 chr5 146687599 146687934 + 1.02077663956384 NA Intergenic Intergenic -102527 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-2 chr2 143063101 143063426 + 1.02077663956384 NA intron (NM_021335, intron 1 of 6) CpG 194 NM_021335 20639 Mm.1323 NM_021335 ENSMUSG00000008333 Snrpb2 2810052G09Rik U2 small nuclear ribonucleoprotein B protein-coding common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-8 chr6 134088329 134088894 + 1.02077663956384 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 52911 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-5 chr5 31563838 31564185 + 1.02077663956384 NA Intergenic Intergenic 7386 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-3 chr12 69502548 69502872 + 1.02077663956384 NA Intergenic Intergenic -27160 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-5 chr4 151988667 151989028 + 1.02077663956384 NA TTS (NM_172705) TTS (NM_172705) 139 NM_175152 69876 Mm.226820 NM_175152 ENSMUSG00000039759 Thap3 2010013E08Rik|2210418H06Rik THAP domain containing, apoptosis associated protein 3 protein-coding common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-4 chr4 108350310 108350778 + 1.02077663956384 NA Intergenic MIRb|SINE|MIR 22392 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-2 chr11 62819821 62820241 + 1.02077663956384 NA promoter-TSS (NM_053169) promoter-TSS (NM_053169) -222 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-7 chr7 122133139 122133580 + 1.02077663956384 NA promoter-TSS (NM_001289845) promoter-TSS (NM_001289845) 318 NM_021608 59288 Mm.478285 NM_021608 ENSMUSG00000030868 Dctn5 4930427E12Rik|C78178|b2b315Clo dynactin 5 protein-coding common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384 chr14 76787862 76788230 + 1.02077663956384 NA Intergenic B3A|SINE|B2 27915 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-3 chr3 38885255 38885634 + 1.02077663956384 NA Intergenic CpG -1496 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-5 chr2 60712722 60713293 + 1.02077663956384 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 9596 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-2 chr2 160872665 160872955 + 1.02077663956384 NA 5' UTR (NM_177263, exon 1 of 4) 5' UTR (NM_177263, exon 1 of 4) 180 NM_177263 320799 Mm.436734 NM_177263 ENSMUSG00000035877 Zhx3 1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395 zinc fingers and homeoboxes 3 protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384 chr1 51747814 51748356 + 1.02077663956384 NA Intergenic Intergenic -151367 NR_151621 100045066 Mm.404734 NR_151621 Gm17767 - predicted gene, 17767 ncRNA unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-6 chr6 71633124 71633385 + 1.02077663956384 NA promoter-TSS (NM_173001) promoter-TSS (NM_173001) -337 NM_001362200 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-4 chr16 34528641 34529256 + 1.02077663956384 NA Intergenic Intergenic -14921 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-9 chr7 15949111 15949390 + 1.02077663956384 NA 3' UTR (NM_153068, exon 6 of 6) 3' UTR (NM_153068, exon 6 of 6) -3142 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Nop53 5330430H08Rik|9430097C02Rik|AU041936|AW536441|Gltscr2|PICT-1|R74911 NOP53 ribosome biogenesis factor protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-3 chr3 27476554 27477201 + 1.02077663956384 NA intron (NM_001356953, intron 12 of 26) intron (NM_001356953, intron 12 of 26) 105526 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|GHRP|GHS-R|Ghsr1a growth hormone secretagogue receptor protein-coding common_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384 chr11 59661661 59662237 + 1.02077663956384 NA promoter-TSS (NM_012027) promoter-TSS (NM_012027) -546 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_33_16_0.722368016086112_4.44864684929339_1.02077663956384-7 chr6 56831729 56832052 + 1.02077663956384 NA promoter-TSS (NM_012056) promoter-TSS (NM_012056) -169 NM_012056 27055 Mm.20943 NM_012056 ENSMUSG00000029781 Fkbp9 1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS FK506 binding protein 9 protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-4 chr3 107762165 107762700 + 1.02077663956384 NA Intergenic Intergenic -1963 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_33_16_0.722368016086112_4.44864684929339_1.02077663956384-8 chr8 107455480 107455846 + 1.02077663956384 NA intron (NM_025830, intron 2 of 23) intron (NM_025830, intron 2 of 23) 19265 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-7 chr11 60126321 60126663 + 1.02063122982878 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) -13590 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-46 chrX 52282279 52282746 + 1.02063122982878 NA intron (NM_016697, intron 7 of 7) intron (NM_016697, intron 7 of 7) 95669 NR_105805 102465202 NR_105805 ENSMUSG00000105738 Mir6384 mmu-mir-6384 microRNA 6384 ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-28 chr2 21030283 21030603 + 1.02063122982878 NA Intergenic Intergenic 61569 NR_033225 433408 Mm.386941 NR_033225 Gm13375 - predicted gene 13375 ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-9 chr12 32953644 32953947 + 1.02063122982878 NA promoter-TSS (NR_044986) promoter-TSS (NR_044986) -6 NR_044986 74076 Mm.50114 NR_044986 ENSMUSG00000097494 4933406C10Rik - RIKEN cDNA 4933406C10 gene ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-8 chr11 119152866 119153213 + 1.02063122982878 NA intron (NM_001347625, intron 9 of 11) intron (NM_001347625, intron 9 of 11) 1098 NR_105899 102465563 NR_105899 ENSMUSG00000098704 Mir6934 Gm27523|mmu-mir-6934 microRNA 6934 ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-24 chr18 70053563 70053894 + 1.02063122982878 NA promoter-TSS (NM_001302798) promoter-TSS (NM_001302798) -140 NM_001302799 80718 Mm.246753 NM_030554 ENSMUSG00000024511 Rab27b 2310021G14Rik|B130064M09Rik RAB27B, member RAS oncogene family protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-2 chr1 135020838 135021050 + 1.02063122982878 NA intron (NM_001033409, intron 6 of 17) intron (NM_001033409, intron 6 of 17) 58379 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-41 chr8 9978619 9978841 + 1.02063122982878 NA intron (NM_001081119, intron 1 of 1) intron (NM_001081119, intron 1 of 1) 1013 NM_026868 68904 Mm.142570 NM_026868 ENSMUSG00000040396 Abhd13 1110065L07Rik|AI463703|AI788994 abhydrolase domain containing 13 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-28 chr3 38936086 38936338 + 1.02063122982878 NA intron (NM_183221, intron 1 of 16) B3|SINE|B2 49272 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-35 chr5 121842653 121842905 + 1.02063122982878 NA Intergenic CpG -5920 NM_008507 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-16 chr15 81587220 81587517 + 1.02063122982878 NA intron (NM_177821, intron 1 of 30) intron (NM_177821, intron 1 of 30) 1154 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-2 chr13 70837459 70837649 + 1.02063122982878 NA intron (NM_172053, intron 2 of 22) intron (NM_172053, intron 2 of 22) 4257 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-4 chr10 120218697 120218945 + 1.02063122982878 NA intron (NM_026617, intron 3 of 6) intron (NM_026617, intron 3 of 6) -8239 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-37 chr6 50459640 50459969 + 1.02063122982878 NA Intergenic B1_Mur1|SINE|Alu -3450 NM_001347213 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_19_8_0.879771941529362_3.60981097220699_1.02063122982878 chr15 78925483 78925703 + 1.02063122982878 NA Intergenic L2|LINE|L2 -1132 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-44 chr7 130643022 130643414 + 1.02063122982878 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -49338 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-5 chr11 33265701 33266035 + 1.02063122982878 NA intron (NR_110973, intron 24 of 28) intron (NR_110973, intron 24 of 28) -62280 NM_019916 27140 Mm.25362 NM_019916 ENSMUSG00000040610 Tlx3 Hox11l2|Rnx|Tlx1l2 T cell leukemia, homeobox 3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-3 chr1 195034491 195034746 + 1.02063122982878 NA non-coding (NR_015566, exon 8 of 8) non-coding (NR_015566, exon 8 of 8) -2422 NR_029809 723963 NR_029809 ENSMUSG00000065412 Mir29b-2 Mirn29b-2|mir-29b-2 microRNA 29b-2 ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-15 chr13 75944587 75944935 + 1.02063122982878 NA promoter-TSS (NM_028493) promoter-TSS (NM_028493) -937 NM_028493 73296 Mm.276200 NM_028493 ENSMUSG00000021589 Rhobtb3 1700040C17Rik|2610033K01Rik|4930503C18Rik|AI317148|AW208826|mKIAA0878 Rho-related BTB domain containing 3 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-27 chr3 84440550 84440963 + 1.02063122982878 NA Intergenic Intergenic 38735 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-38 chr6 52180653 52181022 + 1.02063122982878 NA intron (NM_010452, intron 3 of 4) intron (NM_010452, intron 3 of 4) 7956 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-48 chr8 126584650 126584964 + 1.02063122982878 NA Intergenic Intergenic 8629 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878 chr1 12622630 12623011 + 1.02063122982878 NA Intergenic Intergenic -44743 NR_045297 329096 Mm.417782 NR_045297 ENSMUSG00000097171 Gm17644 4932411L15 predicted gene, 17644 ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-11 chr12 86817415 86817769 + 1.02063122982878 NA Intergenic Intergenic 67222 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-18 chr15 11567008 11567392 + 1.02063122982878 NA Intergenic Intergenic -167542 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-10 chr11 112874303 112874575 + 1.02063122982878 NA Intergenic Intergenic -49311 NR_130164 76393 Mm.86795 NR_130164 1700012H19Rik - RIKEN cDNA 1700012H19 gene ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-36 chr6 21950186 21950562 + 1.02063122982878 NA intron (NM_001311061, intron 2 of 11) intron (NM_001311061, intron 2 of 11) 759 NM_023626 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-3 chr10 21787807 21788100 + 1.02063122982878 NA Intergenic Intergenic -94231 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-41 chr7 84357901 84358190 + 1.02063122982878 NA intron (NM_007488, intron 2 of 18) intron (NM_007488, intron 2 of 18) 51993 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-10 chr12 71856340 71856646 + 1.02063122982878 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) 25425 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-14 chr13 21722069 21722305 + 1.02063122982878 NA exon (NM_178200, exon 1 of 1) exon (NM_178200, exon 1 of 1) 143 NM_178200 319186 Mm.277425 NM_178200 ENSMUSG00000114279 Hist1h2bm H2b-291b histone cluster 1, H2bm protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-20 chr16 10987560 10987996 + 1.02063122982878 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 5343 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-22 chr17 87200922 87201127 + 1.02063122982878 NA Intergenic Intergenic -6082 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-40 chr7 90320257 90320474 + 1.02063122982878 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 18010 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-5 chr17 84149843 84150078 + 1.02063122982878 NA Intergenic Intergenic 37987 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-3 chr13 31207347 31207645 + 1.02063122982878 NA Intergenic Intergenic 33590 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-39 chr7 49882787 49883043 + 1.02063122982878 NA Intergenic Intergenic -27384 NM_001146013 104245 Mm.207053 NM_148931 ENSMUSG00000039728 Slc6a5 Glyt2|prestin solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-44 chr8 105186999 105187296 + 1.02063122982878 NA intron (NM_001161458, intron 3 of 5) PB1D10|SINE|Alu 16473 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-8 chr11 115933154 115933408 + 1.02063122982878 NA promoter-TSS (NM_020483) promoter-TSS (NM_020483) 211 NM_130454 170472 Mm.379351 NM_130454 ENSMUSG00000020752 Recql5 RecQ5|Recq5b|Recql5b RecQ protein-like 5 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-32 chr3 122363192 122363767 + 1.02063122982878 NA Intergenic Intergenic -56278 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_20_8_0.949664674150312_3.64475733851747_1.02063122982878 chr1 162207011 162207223 + 1.02063122982878 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -10506 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878 chr18 62479259 62479574 + 1.02063122982878 NA Intergenic Intergenic 64436 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-49 chr9 13299279 13299672 + 1.02063122982878 NA Intergenic Intergenic 52519 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-29 chr3 128976344 128976567 + 1.02063122982878 NA Intergenic Intergenic -223423 NM_001286942 18741 Mm.246804 NM_011098 ENSMUSG00000028023 Pitx2 9430085M16Rik|Brx1|Brx1b|Munc30|Otlx2|Ptx2|Rieg paired-like homeodomain transcription factor 2 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-2 chr1 183865450 183865692 + 1.02063122982878 NA Intergenic Intergenic 116594 NR_151520 102637191 Mm.417076 NR_151520 ENSMUSG00000103305 Gm34068 - predicted gene, 34068 ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-30 chr2 117869525 117869802 + 1.02063122982878 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 47735 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-42 chr7 97332385 97332755 + 1.02063122982878 NA intron (NM_001039039, intron 1 of 1) CpG 247 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878 chr1 120055386 120055669 + 1.02063122982878 NA intron (NM_001012322, intron 11 of 13) intron (NM_001012322, intron 11 of 13) 18253 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-17 chr14 54185236 54185448 + 1.02063122982878 NA Intergenic Intergenic 68587 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-21 chr16 97534858 97535081 + 1.02063122982878 NA Intergenic Intergenic -1112 NR_003508 17858 Mm.14157 NM_013606 ENSMUSG00000023341 Mx2 AI528743|Mx-2 MX dynamin-like GTPase 2 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-46 chr8 85493096 85493334 + 1.02063122982878 NA intron (NM_173866, intron 2 of 11) CpG-14314 598 NM_173866 108682 Mm.200423 NM_173866 ENSMUSG00000031700 Gpt2 4631422C05Rik|ALT2|AU014768|AU041193|C87201 glutamic pyruvate transaminase (alanine aminotransferase) 2 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-43 chr8 84238030 84238326 + 1.02063122982878 NA Intergenic Intergenic -1136 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-13 chr13 96538558 96538781 + 1.02063122982878 NA intron (NM_012048, intron 1 of 14) intron (NM_012048, intron 1 of 14) 3910 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-5 chr10 19126837 19127258 + 1.02063122982878 NA Intergenic Intergenic -14702 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-21 chr17 78383255 78383630 + 1.02063122982878 NA intron (NM_001360407, intron 7 of 9) intron (NM_001360407, intron 7 of 9) 34710 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-34 chr4 119320174 119320423 + 1.02063122982878 NA intron (NM_001110129, intron 1 of 9) CpG 225 NM_001110129 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-7 chr11 58025923 58026236 + 1.02063122982878 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 17015 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-25 chr2 50249045 50249347 + 1.02063122982878 NA Intergenic Intergenic 47605 NM_001348200 109129 Mm.29214 NM_133839 ENSMUSG00000026766 Mmadhc 2010311D03Rik|AI314967|CblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-40 chr8 119831809 119832219 + 1.02063122982878 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 8565 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-12 chr13 36527369 36527758 + 1.02063122982878 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 206914 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-17 chr15 81855881 81856122 + 1.02063122982878 NA intron (NM_020507, intron 1 of 1) intron (NM_020507, intron 1 of 1) 2325 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-3 chr1 153124440 153124836 + 1.02063122982878 NA intron (NM_008485, intron 23 of 23) intron (NM_008485, intron 23 of 23) 61809 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-21 chr16 55504303 55504594 + 1.02063122982878 NA Intergenic Intergenic 9717 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-2 chr12 35294924 35295150 + 1.02063122982878 NA Intergenic Intergenic -100140 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-28 chr3 105706657 105706940 + 1.02063122982878 NA intron (NM_001163356, intron 1 of 1) intron (NM_001163356, intron 1 of 1) 1340 NM_001163356 109050 Mm.212591 NM_175398 ENSMUSG00000048458 Fam212b 6530418L21Rik|inka2 family with sequence similarity 212, member B protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-9 chr12 38928944 38929289 + 1.02063122982878 NA Intergenic Intergenic 145405 NM_001163154 14009 Mm.4866 NM_007960 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-13 chr13 74764644 74764894 + 1.02063122982878 NA intron (NM_001301153, intron 3 of 31) intron (NM_001301153, intron 3 of 31) 5967 NM_001301156 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-29 chr3 52630806 52631027 + 1.02063122982878 NA Intergenic Intergenic -108808 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-41 chrX 53056752 53057020 + 1.02063122982878 NA intron (NR_038185, intron 1 of 3) CpG 304 NR_038185 72575 Mm.59516 NR_038184 C430049B03Rik 2700063P19Rik|9430052C07Rik|mir-322|mir-351|mir-503 RIKEN cDNA C430049B03 gene ncRNA common_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-5 chr3 132983659 132983876 + 1.02063122982878 NA intron (NM_001356309, intron 11 of 11) intron (NM_001356309, intron 11 of 11) -33476 NM_033525 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-34 chr4 140702955 140703175 + 1.02063122982878 NA intron (NM_173867, intron 2 of 12) CpG-10575 1592 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-17 chr15 98934925 98935251 + 1.02063122982878 NA promoter-TSS (NM_011654) promoter-TSS (NM_011654) -698 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878 chr12 87147931 87148147 + 1.02063122982878 NA promoter-TSS (NM_153415) promoter-TSS (NM_153415) -137 NM_153415 217734 Mm.388249 NM_153415 ENSMUSG00000034126 Pomt2 - protein-O-mannosyltransferase 2 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-12 chr12 12685549 12685769 + 1.02063122982878 NA Intergenic Intergenic -15742 NR_136889 102637952 Mm.421393 NR_136889 Gm34637 - predicted gene, 34637 ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-42 chr8 79993988 79994190 + 1.02063122982878 NA intron (NM_020259, intron 7 of 12) intron (NM_020259, intron 7 of 12) 63919 NM_020259 15245 Mm.254493 NM_020259 ENSMUSG00000064325 Hhip Hhip1 Hedgehog-interacting protein protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-7 chr7 34168693 34168922 + 1.02063122982878 NA promoter-TSS (NM_016682) promoter-TSS (NM_016682) -278 NM_016682 50995 Mm.27560 NM_016682 ENSMUSG00000052997 Uba2 AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b ubiquitin-like modifier activating enzyme 2 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-47 chr8 113720723 113721035 + 1.02063122982878 NA intron (NM_172466, intron 16 of 22) intron (NM_172466, intron 16 of 22) -44421 NR_136914 102631810 Mm.412563 NR_136914 ENSMUSG00000110582 Gm30052 - predicted gene, 30052 ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-24 chr17 74288499 74288718 + 1.02063122982878 NA intron (NM_133771, intron 1 of 8) intron (NM_133771, intron 1 of 8) 6255 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-40 chr7 66591697 66591993 + 1.02063122982878 NA Intergenic Intergenic 97716 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-20 chr16 45408499 45408748 + 1.02063122982878 NA intron (NM_010818, intron 1 of 5) intron (NM_010818, intron 1 of 5) 430 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-11 chr11 114850121 114850331 + 1.02063122982878 NA Intergenic Intergenic -1306 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-19 chr15 11744825 11745076 + 1.02063122982878 NA Intergenic Intergenic 160724 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-39 chr6 88958488 88958742 + 1.02063122982878 NA Intergenic Intergenic 56364 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-23 chr17 71617553 71617860 + 1.02063122982878 NA intron (NM_175639, intron 1 of 17) intron (NM_175639, intron 1 of 17) 1491 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding common_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-2 chr5 143050256 143050522 + 1.02063122982878 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 62631 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-23 chr18 35022810 35023001 + 1.02063122982878 NA Intergenic Intergenic -68554 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-33 chr5 134550745 134551158 + 1.02063122982878 NA intron (NM_001039162, intron 1 of 15) intron (NM_001039162, intron 1 of 15) 1483 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-6 chr6 50254574 50254929 + 1.02063122982878 NA intron (NM_018769, intron 1 of 9) intron (NM_018769, intron 1 of 9) 7018 NM_018769 54722 Mm.248361 NM_018769 ENSMUSG00000029821 Gsdme 2310037D07Rik|4932441K13Rik|Dfna5|Dfna5h|EG14210|Fin15 gasdermin E protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-4 chr16 96145626 96145875 + 1.02063122982878 NA intron (NM_207301, intron 1 of 4) CpG 331 NM_207301 71446 Mm.255063 NM_207301 ENSMUSG00000023147 Wrb 5530402J05Rik|C030018G21Rik|Chd5 tryptophan rich basic protein protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-32 chr3 145827020 145827334 + 1.02063122982878 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 68485 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-12 chr13 67754532 67754968 + 1.02063122982878 NA non-coding (NR_027969, exon 3 of 3) non-coding (NR_027969, exon 3 of 3) 384 NM_001001130 22746 Mm.288396 NM_001001130 ENSMUSG00000058331 Zfp85 KRAB19|Rslcan2|Zfp71|Zfp85-rs1 zinc finger protein 85 protein-coding common_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-6 chr8 18630165 18630401 + 1.02063122982878 NA intron (NM_173189, intron 7 of 13) intron (NM_173189, intron 7 of 13) 35152 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-45 chr9 67140105 67140470 + 1.02063122982878 NA intron (NR_045748, intron 1 of 2) intron (NR_045748, intron 1 of 2) 6726 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-16 chr15 87660052 87660320 + 1.02063122982878 NA intron (NM_134096, intron 1 of 3) intron (NM_134096, intron 1 of 3) 34956 NM_134096 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-38 chr6 39319348 39319644 + 1.02063122982878 NA Intergenic Intergenic 57939 NR_155076 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-31 chr3 105046954 105047322 + 1.02063122982878 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 5815 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-8 chr11 61641840 61642044 + 1.02063122982878 NA Intergenic Intergenic -11379 NM_027817 71520 Mm.202760 NM_027817 ENSMUSG00000004837 Grap 8430435N19Rik|BB233594 GRB2-related adaptor protein protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-27 chr19 55708000 55708217 + 1.02063122982878 NA Intergenic Intergenic -5904 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-25 chr18 52570038 52570707 + 1.02063122982878 NA Intergenic Intergenic -40505 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-31 chr3 3761097 3761381 + 1.02063122982878 NA Intergenic Intergenic 253209 NM_013920 30942 Mm.330897 NM_013920 ENSMUSG00000017688 Hnf4g NR2A2 hepatocyte nuclear factor 4, gamma protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-6 chr10 60535137 60535473 + 1.02063122982878 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 135579 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-9 chr9 63741884 63742225 + 1.02063122982878 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 15940 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-7 chr11 118290738 118290936 + 1.02063122982878 NA promoter-TSS (NM_001033528) promoter-TSS (NM_001033528) -593 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak2_19_8_0.879771941529362_3.60981097220699_1.02063122982878-3 chr7 118508254 118508567 + 1.02063122982878 NA Intergenic Intergenic -16435 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-36 chr5 147620490 147620748 + 1.02063122982878 NA intron (NM_010228, intron 14 of 29) intron (NM_010228, intron 14 of 29) 105369 NM_010228 14254 Mm.389712 NM_010228 ENSMUSG00000029648 Flt1 AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1 FMS-like tyrosine kinase 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-15 chr15 50704041 50704263 + 1.02063122982878 NA intron (NM_001310481, intron 4 of 5) intron (NM_001310481, intron 4 of 5) 184897 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e transcriptional repressor GATA binding 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-27 chr19 42588156 42588476 + 1.02063122982878 NA intron (NM_177464, intron 6 of 6) intron (NM_177464, intron 6 of 6) 24490 NM_001164311 67573 Mm.178767 NM_053083 ENSMUSG00000025185 Loxl4 4833426I20Rik|Loxc lysyl oxidase-like 4 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-15 chr14 69665109 69665441 + 1.02063122982878 NA intron (NM_033325, intron 5 of 13) intron (NM_033325, intron 5 of 13) -26973 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-38 chr5 148357287 148357780 + 1.02063122982878 NA intron (NM_007513, intron 2 of 12) intron (NM_007513, intron 2 of 12) 35282 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-23 chr18 84089981 84090247 + 1.02063122982878 NA intron (NM_146090, intron 1 of 1) intron (NM_146090, intron 1 of 1) 1956 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-3 chr14 76780286 76780534 + 1.02063122982878 NA Intergenic Intergenic 20279 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-19 chr16 24454897 24455178 + 1.02063122982878 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 6946 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-45 chr8 33888633 33889115 + 1.02063122982878 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 40989 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-19 chr16 91464593 91464827 + 1.02063122982878 NA promoter-TSS (NR_077219) promoter-TSS (NR_077219) -394 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-35 chr4 152571346 152571649 + 1.02063122982878 NA Intergenic Intergenic 93355 NM_153424 260305 Mm.302496 NM_153424 ENSMUSG00000039577 Nphp4 4930564O18Rik|nmf192 nephronophthisis 4 (juvenile) homolog (human) protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878 chr11 106674814 106675045 + 1.02063122982878 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 40352 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-14 chr14 18773461 18773761 + 1.02063122982878 NA intron (NM_001360327, intron 3 of 5) intron (NM_001360327, intron 3 of 5) 119802 NM_001360328 218793 Mm.23551 NM_144839 ENSMUSG00000058317 Ube2e2 BC016265 ubiquitin-conjugating enzyme E2E 2 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-32 chr5 92855279 92855500 + 1.02063122982878 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -42604 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-4 chr10 43656744 43657052 + 1.02063122982878 NA Intergenic Intergenic 63471 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-6 chr11 98710200 98710403 + 1.02063122982878 NA exon (NM_011869, exon 17 of 26) exon (NM_011869, exon 17 of 26) 8988 NM_009971 12985 Mm.1238 NM_009971 ENSMUSG00000038067 Csf3 Csfg|G-CSF|MGI-IG colony stimulating factor 3 (granulocyte) protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-30 chr3 97763204 97763482 + 1.02063122982878 NA intron (NM_001039376, intron 8 of 46) intron (NM_001039376, intron 8 of 46) 4671 NM_178080 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878 chr1 63765859 63766185 + 1.02063122982878 NA intron (NM_001256158, intron 2 of 2) intron (NM_001256158, intron 2 of 2) 3245 NM_001256158 74426 Mm.159197 NM_001256158 ENSMUSG00000025961 4933402D24Rik - RIKEN cDNA 4933402D24 gene protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-26 chr19 4135911 4136113 + 1.02063122982878 NA exon (NM_144532, exon 6 of 6) exon (NM_144532, exon 6 of 6) 3597 NM_144532 73660 Mm.379226 NM_144532 ENSMUSG00000024842 Cabp4 2410038D05Rik calcium binding protein 4 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-26 chr2 118044954 118045219 + 1.02063122982878 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 66116 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-37 chr6 17110664 17111245 + 1.02063122982878 NA intron (NR_153844, intron 1 of 2) intron (NR_153844, intron 1 of 2) 45805 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-18 chr16 38742323 38742600 + 1.02063122982878 NA intron (NM_001285793, intron 1 of 6) CpG 202 NM_001285793 56375 Mm.182377 NM_019804 ENSMUSG00000022793 B4galt4 9130402O08Rik|B4galt-IV|b4Gal-T4|beta4Gal-T4|beta4GalT-IV UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-22 chr16 92423715 92424148 + 1.02063122982878 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) -23853 NM_019466 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-26 chr19 24635608 24635847 + 1.02063122982878 NA Intergenic Intergenic -38281 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-14 chr14 30633901 30634221 + 1.02063122982878 NA Intergenic Intergenic -7853 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-4 chr15 13391172 13391359 + 1.02063122982878 NA Intergenic Intergenic -217590 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-31 chr5 38208858 38209116 + 1.02063122982878 NA intron (NR_153116, intron 2 of 5) intron (NR_153116, intron 2 of 5) 11467 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-18 chr16 14372605 14372927 + 1.02063122982878 NA intron (NM_008576, intron 1 of 30) intron (NM_008576, intron 1 of 30) 11208 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-35 chr5 145138612 145139046 + 1.02063122982878 NA intron (NM_001033313, intron 1 of 5) intron (NM_001033313, intron 1 of 5) 1260 NM_001033313 231887 Mm.188851 NM_001033313 ENSMUSG00000029623 Pdap1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding common_peak2_19_8_0.879771941529362_3.60981097220699_1.02063122982878-2 chr2 76406699 76406902 + 1.02063122982878 NA intron (NM_001290734, intron 1 of 24) CpG 292 NM_001290733 99031 Mm.240435 NM_145525 ENSMUSG00000042359 Osbpl6 1110062M20Rik|AI596402|ORP-6|mKIAA4128 oxysterol binding protein-like 6 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-33 chr3 123328883 123329252 + 1.02063122982878 NA intron (NM_027135, intron 9 of 22) intron (NM_027135, intron 9 of 22) 56923 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-8 chr9 45955831 45956237 + 1.02063122982878 NA promoter-TSS (NM_172257) promoter-TSS (NM_172257) -785 NM_172257 214597 Mm.379345 NM_172257 ENSMUSG00000034908 Sidt2 B930096O19|BC023957|CGI-40 SID1 transmembrane family, member 2 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-5 chr11 48855325 48855546 + 1.02063122982878 NA Intergenic CpG 15985 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-11 chr13 49371314 49371686 + 1.02063122982878 NA intron (NM_001039179, intron 2 of 6) intron (NM_001039179, intron 2 of 6) 29951 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - BICD cargo adaptor 2 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-37 chr5 118339729 118340059 + 1.02063122982878 NA Intergenic Intergenic 94667 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-13 chr12 98901050 98901451 + 1.02063122982878 NA 5' UTR (NM_001081191, exon 1 of 44) 5' UTR (NM_001081191, exon 1 of 44) 234 NM_001081191 319670 Mm.390484 NM_001081191 ENSMUSG00000051166 Eml5 BC027154|C130068M19Rik echinoderm microtubule associated protein like 5 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-25 chr19 5836999 5837217 + 1.02063122982878 NA non-coding (NR_131212, exon 1 of 1) non-coding (NR_131212, exon 1 of 1) 8370 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-29 chr2 32758854 32759120 + 1.02063122982878 NA intron (NM_152800, intron 2 of 4) intron (NM_152800, intron 2 of 4) 1753 NM_152800 30933 Mm.200695 NM_152800 ENSMUSG00000009563 Tor2a Prosalusin torsin family 2, member A protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-36 chr5 64383129 64383460 + 1.02063122982878 NA Intergenic Intergenic 84648 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-10 chr9 65885240 65885529 + 1.02063122982878 NA promoter-TSS (NM_001170907) promoter-TSS (NM_001170907) -211 NM_001170907 56404 Mm.208379 NM_019797 ENSMUSG00000032386 Trip4 4930558E03Rik|ASC-1|Asc1|BB191711 thyroid hormone receptor interactor 4 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-16 chr13 114492996 114493338 + 1.02063122982878 NA Intergenic Intergenic -34216 NM_008046 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-34 chr5 137649771 137650119 + 1.02063122982878 NA TTS (NM_001303266) TTS (NM_001303266) -4231 NM_010571 16369 Mm.24486 NM_010571 ENSMUSG00000047182 Irs3 AA408304 insulin receptor substrate 3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-43 chr7 98483258 98483520 + 1.02063122982878 NA Intergenic Intergenic -10833 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-33 chr3 146655474 146655691 + 1.02063122982878 NA Intergenic Intergenic -4265 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-6 chr11 55023166 55023500 + 1.02063122982878 NA intron (NR_138556, intron 1 of 24) intron (NR_138556, intron 1 of 24) 10138 NR_138556 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-10 chr12 103996490 103996909 + 1.02063122982878 NA TTS (NM_001361910) TTS (NM_001361910) -6742 NM_001166350 380780 Mm.201338 NM_199314 ENSMUSG00000063232 Serpina11 Gm895 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-22 chr17 47597638 47598112 + 1.02063122982878 NA intron (NM_001081635, intron 5 of 6) intron (NM_001081635, intron 5 of 6) 4408 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-2 chr1 64004200 64004537 + 1.02063122982878 NA Intergenic Intergenic 38133 NR_105864 102466760 NR_105864 ENSMUSG00000098487 Mir6899 Gm27384|mmu-mir-6899 microRNA 6899 ncRNA unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-39 chr7 68179890 68180194 + 1.02063122982878 NA intron (NM_010513, intron 5 of 20) intron (NM_010513, intron 5 of 20) 84191 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-24 chr2 25986412 25986605 + 1.02063122982878 NA Intergenic L1M4|LINE|L1 -3226 NM_001276361 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-9 chr11 88629514 88629916 + 1.02063122982878 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) 10464 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_9_17_-1.11317307889739_3.61333846199362_1.02063122982878-4 chr1 186575813 186576170 + 1.02063122982878 NA Intergenic Intergenic -17310 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_19_8_0.879771941529362_3.60981097220699_1.02063122982878-20 chr17 66342350 66342914 + 1.02063122982878 NA intron (NM_001114098, intron 13 of 14) intron (NM_001114098, intron 13 of 14) 107118 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding unique_peak1_20_8_0.949664674150312_3.64475733851747_1.02063122982878-30 chr4 134662852 134663077 + 1.02063122982878 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 41326 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_209_139_0.288798618681803_7.27368232628587_1.0195956752511 chr4 106315633 106317870 + 1.0195956752511 NA exon (NM_183225, exon 1 of 68) exon (NM_183225, exon 1 of 68) 538 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak2_205_203_-0.281892956486512_7.53147886372824_1.01909294614626 chr19 45659057 45660482 + 1.01909294614626 NA intron (NM_013907, intron 1 of 8) CpG 424 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding common_peak2_37_47_-0.615799046176009_5.27706297763315_1.01880247943822 chr1 138559219 138559961 + 1.01880247943822 NA intron (NM_021605, intron 2 of 9) intron (NM_021605, intron 2 of 9) 60167 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_56_31_0.549999056772601_5.2749995283863_1.01880247943822 chr8 126805749 126806195 + 1.01880247943822 NA Intergenic Intergenic -43048 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_36_47_-0.654001759663714_5.2579616208893_1.01880247943822 chr13 25070378 25070802 + 1.01880247943822 NA intron (NM_001195617, intron 2 of 7) intron (NM_001195617, intron 2 of 7) 14586 NM_177577 195208 Mm.284719 NM_177577 ENSMUSG00000035910 Dcdc2a AW492955|Dcdc2|RU2 doublecortin domain containing 2a protein-coding common_peak1_56_31_0.549999056772601_5.2749995283863_1.01880247943822-2 chr12 70111031 70111815 + 1.01880247943822 NA intron (NM_001286079, intron 1 of 28) CpG 206 NR_104398 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak1_36_47_-0.654001759663714_5.2579616208893_1.01880247943822 chr5 45669223 45669620 + 1.01880247943822 NA promoter-TSS (NM_019438) promoter-TSS (NM_019438) 287 NR_073433 69788 Mm.381492 NR_073433 ENSMUSG00000104986 1600023N17Rik AV119442 RIKEN cDNA 1600023N17 gene ncRNA common_peak1_56_31_0.549999056772601_5.2749995283863_1.01880247943822-3 chr3 40682734 40683427 + 1.01880247943822 NA intron (NM_175515, intron 7 of 15) intron (NM_175515, intron 7 of 15) -25791 NM_178386 73333 Mm.78691 NM_178386 ENSMUSG00000069041 Slc25a31 1700034J06Rik|Ant4|Sfec solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 protein-coding common_peak2_37_47_-0.615799046176009_5.27706297763315_1.01880247943822-2 chr17 46628677 46629424 + 1.01880247943822 NA intron (NM_175168, intron 1 of 19) CpG 454 NM_175168 71461 Mm.181833 NM_175168 ENSMUSG00000023972 Ptk7 8430404F20Rik|chz|mPTK7/CCK4 PTK7 protein tyrosine kinase 7 protein-coding unique_peak2_37_47_-0.615799046176009_5.27706297763315_1.01880247943822-2 chr18 84085750 84086830 + 1.01880247943822 NA 5' UTR (NM_001081300, exon 1 of 2) 5' UTR (NM_001081300, exon 1 of 2) 272 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak1_56_31_0.549999056772601_5.2749995283863_1.01880247943822 chr10 42274246 42275199 + 1.01880247943822 NA intron (NM_019740, intron 2 of 3) intron (NM_019740, intron 2 of 3) 2020 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_36_47_-0.654001759663714_5.2579616208893_1.01880247943822-2 chr15 39046483 39047460 + 1.01880247943822 NA Intergenic Intergenic -29961 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak1_37_47_-0.615799046176009_5.27706297763315_1.01880247943822 chr14 54233069 54233938 + 1.01880247943822 NA Intergenic Intergenic 20426 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_37_47_-0.615799046176009_5.27706297763315_1.01880247943822 chr15 11837987 11839039 + 1.01880247943822 NA Intergenic Intergenic 67161 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_56_31_0.549999056772601_5.2749995283863_1.01880247943822-4 chr5 114100341 114100942 + 1.01880247943822 NA intron (NM_001033202, intron 1 of 12) CpG 308 NM_001033202 100756 Mm.240421 NM_001033202 ENSMUSG00000029592 Usp30 6330590F17Rik|AI851327|D5Ertd483e ubiquitin specific peptidase 30 protein-coding common_peak1_112_69_0.401039684715285_6.32980285930261_1.01696063309885 chr11 54786125 54787613 + 1.01696063309885 NA intron (NM_178626, intron 1 of 5) tRNA-Ala-GCA|tRNA|tRNA 834 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak2_44_23_0.626405646705428_4.89816532407387_1.01695873136768-4 chr6 52225447 52225904 + 1.01695873136768 NA exon (NM_010456, exon 1 of 2) exon (NM_010456, exon 1 of 2) 1695 NM_010456 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-9 chr5 112323942 112324511 + 1.01695873136768 NA Intergenic Intergenic -2143 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-2 chr11 88618280 88618879 + 1.01695873136768 NA promoter-TSS (NR_131025) promoter-TSS (NR_131025) -672 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_27_37_-0.71622841965166_4.88981330361776_1.01695873136768-2 chr15 78831861 78832396 + 1.01695873136768 NA Intergenic Intergenic -10519 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_44_23_0.626405646705428_4.89816532407387_1.01695873136768 chr13 15562286 15562775 + 1.01695873136768 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 98807 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-7 chr2 151907924 151908299 + 1.01695873136768 NA Intergenic Intergenic -3096 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_27_37_-0.71622841965166_4.88981330361776_1.01695873136768-4 chr5 77360549 77361022 + 1.01695873136768 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 47260 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768 chr2 33222095 33222713 + 1.01695873136768 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 6443 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak1_27_37_-0.71622841965166_4.88981330361776_1.01695873136768-2 chr19 34607529 34607752 + 1.01695873136768 NA promoter-TSS (NM_001005858) promoter-TSS (NM_001005858) -317 NM_001005858 667370 Mm.271850 NM_001005858 ENSMUSG00000062488 Ifit3b I830012O16Rik interferon-induced protein with tetratricopeptide repeats 3B protein-coding common_peak2_44_23_0.626405646705428_4.89816532407387_1.01695873136768-2 chr13 119487827 119488393 + 1.01695873136768 NA promoter-TSS (NM_001039244) promoter-TSS (NM_001039244) 71 NM_001039244 633640 Mm.46679 NM_001039244 ENSMUSG00000074634 Tmem267 EG633640|Gm7120 transmembrane protein 267 protein-coding common_peak1_27_37_-0.71622841965166_4.88981330361776_1.01695873136768-3 chr8 18783832 18784352 + 1.01695873136768 NA intron (NM_173189, intron 12 of 13) B4A|SINE|B4 -42530 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak2_27_37_-0.71622841965166_4.88981330361776_1.01695873136768-2 chr3 122086724 122087059 + 1.01695873136768 NA intron (NM_007378, intron 10 of 49) intron (NM_007378, intron 10 of 49) 42431 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-6 chr2 124858136 124858424 + 1.01695873136768 NA Intergenic Intergenic 204699 NM_199239 214968 Mm.330536 NM_172537 ENSMUSG00000027200 Sema6d 1110067B02Rik|AA409156|D330011G23|mKIAA1479 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-8 chr3 138443113 138443646 + 1.01695873136768 NA intron (NM_007410, intron 1 of 8) CpG 286 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768 chr10 99265629 99266232 + 1.01695873136768 NA intron (NM_026268, intron 2 of 2) intron (NM_026268, intron 2 of 2) 2699 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-5 chr13 119462061 119462716 + 1.01695873136768 NA promoter-TSS (NM_001113550) promoter-TSS (NM_001113550) -371 NR_153825 67392 Mm.390641 NM_026127 ENSMUSG00000062822 4833420G17Rik 2210017J06Rik|5730533D17Rik|AW107518|C85193 RIKEN cDNA 4833420G17 gene protein-coding unique_peak2_27_37_-0.71622841965166_4.88981330361776_1.01695873136768 chr2 128240962 128241605 + 1.01695873136768 NA Intergenic Intergenic 113708 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_27_37_-0.71622841965166_4.88981330361776_1.01695873136768 chr1 12285007 12285653 + 1.01695873136768 NA Intergenic Intergenic -140656 NR_105759 102465961 NR_105759 ENSMUSG00000098555 Mir6341 Gm27262|mmu-mir-6341 microRNA 6341 ncRNA common_peak1_27_37_-0.71622841965166_4.88981330361776_1.01695873136768 chr12 98258954 98259258 + 1.01695873136768 NA intron (NM_008079, intron 1 of 16) CpG 353 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-4 chr13 71148220 71149018 + 1.01695873136768 NA Intergenic Intergenic 41530 NR_130325 100316804 NR_130325 ENSMUSG00000080580 Mir466f-4 Mirn466f-4|mmu-mir-466f-4 microRNA 466f-4 ncRNA common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-10 chr7 83716937 83717507 + 1.01695873136768 NA intron (NM_001360088, intron 2 of 18) intron (NM_001360088, intron 2 of 18) 15176 NM_001360087 16170 Mm.10137 NM_010551 ENSMUSG00000001741 Il16 mKIAA4048 interleukin 16 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-11 chr9 108305522 108305901 + 1.01695873136768 NA promoter-TSS (NM_016802) promoter-TSS (NM_016802) 448 NM_133986 102791 Mm.24670 NM_133986 ENSMUSG00000039461 Tcta 9130410M22Rik|AW553637|C85065|Tctal T cell leukemia translocation altered gene protein-coding common_peak2_44_23_0.626405646705428_4.89816532407387_1.01695873136768-3 chr3 116380046 116380369 + 1.01695873136768 NA intron (NM_001080818, intron 4 of 15) intron (NM_001080818, intron 4 of 15) -25963 NM_001355646 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding common_peak2_27_37_-0.71622841965166_4.88981330361776_1.01695873136768-3 chr4 82165769 82166197 + 1.01695873136768 NA Intergenic Intergenic -100093 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA unique_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-2 chr3 88424374 88424999 + 1.01695873136768 NA intron (NM_001281795, intron 1 of 3) intron (NM_001281795, intron 1 of 3) 455 NM_178696 229517 Mm.301740 NM_178696 ENSMUSG00000050144 Slc25a44 6720482A19|B430110G05Rik solute carrier family 25, member 44 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-12 chrX 142389732 142390128 + 1.01695873136768 NA intron (NM_001033600, intron 1 of 15) intron (NM_001033600, intron 1 of 15) 605 NM_001033600 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding common_peak1_44_23_0.626405646705428_4.89816532407387_1.01695873136768-3 chr12 8510029 8510734 + 1.01695873136768 NA Intergenic Intergenic -10372 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_61_71_-0.499475461889531_5.92018727049755_1.01621186439953 chr6 37870743 37871493 + 1.01621186439953 NA exon (NM_001272064, exon 1 of 19) exon (NM_001272064, exon 1 of 19) 307 NM_145076 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_86_51_0.455308905463629_5.92809417087291_1.01621186439952 chr13 107890712 107891268 + 1.01621186439952 NA promoter-TSS (NM_145456) promoter-TSS (NM_145456) -926 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-67 chr8 49312313 49312548 + 1.01572999746118 NA Intergenic Intergenic -637740 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-11 chr10 116947571 116947873 + 1.01572999746118 NA intron (NM_001359645, intron 1 of 10) intron (NM_001359645, intron 1 of 10) 2731 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-62 chr7 38184773 38185143 + 1.01572999746118 NA intron (NM_028166, intron 1 of 3) intron (NM_028166, intron 1 of 3) 1171 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-55 chr5 113158751 113159039 + 1.01572999746118 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 4418 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-38 chrX 20867564 20867858 + 1.01572999746118 NA intron (NM_001110780, intron 5 of 12) intron (NM_001110780, intron 5 of 12) -2455 NM_001044384 21857 Mm.8245 NM_011593 ENSMUSG00000001131 Timp1 Clgi|EPA|TIMP-1|TPA-S1|Timp tissue inhibitor of metalloproteinase 1 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-11 chr13 104519696 104520032 + 1.01572999746118 NA Intergenic Intergenic 232029 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-2 chr10 24468182 24468465 + 1.01572999746118 NA Intergenic Intergenic -127119 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-47 chr3 159900035 159900454 + 1.01572999746118 NA intron (NM_001356350, intron 3 of 12) intron (NM_001356350, intron 3 of 12) 60594 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-37 chr2 105796426 105796651 + 1.01572999746118 NA intron (NM_023876, intron 7 of 9) intron (NM_023876, intron 7 of 9) 108026 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding common_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-2 chr2 122701501 122701746 + 1.01572999746118 NA intron (NM_011774, intron 1 of 6) intron (NM_011774, intron 1 of 6) 1040 NM_011774 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-29 chr16 92612045 92612296 + 1.01572999746118 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 85159 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-45 chr3 144663196 144663490 + 1.01572999746118 NA Intergenic Intergenic 56992 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-65 chr8 14602729 14602962 + 1.01572999746118 NA intron (NM_172910, intron 4 of 15) intron (NM_172910, intron 4 of 15) -285691 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-57 chr5 144912414 144912616 + 1.01572999746118 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) -15699 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA common_peak1_6_14_-1.3610815426701_3.22634982427347_1.01572999746118 chr11 82035617 82035805 + 1.01572999746118 NA exon (NM_011333, exon 1 of 3) exon (NM_011333, exon 1 of 3) 134 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-21 chr2 29423878 29424161 + 1.01572999746118 NA intron (NM_001290489, intron 2 of 6) intron (NM_001290489, intron 2 of 6) 45505 NM_001290490 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-3 chr11 8533174 8533381 + 1.01572999746118 NA intron (NM_001083587, intron 10 of 30) intron (NM_001083587, intron 10 of 30) 131258 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-25 chr14 57145608 57145844 + 1.01572999746118 NA Intergenic Intergenic -12115 NM_001010937 14623 Mm.25652 NM_008128 ENSMUSG00000040055 Gjb6 AA958971|Cx30|D14Bwg0506e gap junction protein, beta 6 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-70 chr9 21436045 21436307 + 1.01572999746118 NA intron (NM_001357721, intron 1 of 19) intron (NM_001357721, intron 1 of 19) 11268 NM_001357719 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-17 chr12 70831231 70831524 + 1.01572999746118 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 5863 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-41 chr3 65882700 65882972 + 1.01572999746118 NA Intergenic Intergenic 75413 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-29 chr6 84057998 84058430 + 1.01572999746118 NA intron (NM_001077694, intron 3 of 54) intron (NM_001077694, intron 3 of 54) 38828 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-66 chr8 33435672 33435876 + 1.01572999746118 NA Intergenic Intergenic -48537 NR_033589 628431 Mm.376526 NR_033589 Hmgb1-rs17 Hmg1-rs17 high mobility group box 1, related sequence 17 pseudo common_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118 chr14 7812016 7812373 + 1.01572999746118 NA Intergenic ID_B1|SINE|B4 -5763 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-3 chr1 45795975 45796194 + 1.01572999746118 NA intron (NM_028599, intron 1 of 20) intron (NM_028599, intron 1 of 20) 918 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-39 chr2 128738929 128739173 + 1.01572999746118 NA intron (NM_008587, intron 4 of 18) intron (NM_008587, intron 4 of 18) 40136 NM_008587 17289 Mm.239655 NM_008587 ENSMUSG00000014361 Mertk Eyk|Mer|Nyk|nmf12 c-mer proto-oncogene tyrosine kinase protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-53 chr5 91239577 91239935 + 1.01572999746118 NA Intergenic Intergenic 43320 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-71 chr9 42393254 42393490 + 1.01572999746118 NA intron (NM_009347, intron 3 of 23) intron (NM_009347, intron 3 of 23) 6557 NM_001324548 21683 Mm.42209 NM_009347 ENSMUSG00000037705 Tecta Tctna tectorin alpha protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-26 chr14 120846260 120846513 + 1.01572999746118 NA Intergenic Intergenic -64808 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-44 chr3 121732573 121732868 + 1.01572999746118 NA intron (NM_010171, intron 5 of 5) intron (NM_010171, intron 5 of 5) 9183 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-4 chr11 68177098 68177368 + 1.01572999746118 NA intron (NM_018768, intron 7 of 7) intron (NM_018768, intron 7 of 7) -43659 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-24 chr2 109280964 109281163 + 1.01572999746118 NA intron (NM_139303, intron 1 of 16) CpG 325 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-75 chrX 99138255 99138570 + 1.01572999746118 NA intron (NM_010110, intron 1 of 4) intron (NM_010110, intron 1 of 4) 2351 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-35 chr8 78510891 78511164 + 1.01572999746118 NA intron (NR_104094, intron 1 of 9) intron (NR_104094, intron 1 of 9) 1699 NM_001282108 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-8 chr10 24333496 24333749 + 1.01572999746118 NA Intergenic Intergenic 110105 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-10 chr10 81770832 81771132 + 1.01572999746118 NA intron (NM_001346707, intron 1 of 4) CpG 160 NM_199062 331188 Mm.351497 NM_199062 ENSMUSG00000096718 Zfp781 A130081B01 zinc finger protein 781 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-16 chr12 20990814 20991063 + 1.01572999746118 NA Intergenic CpG -120818 NM_001004364 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-31 chr7 87241413 87241712 + 1.01572999746118 NA Intergenic Intergenic -5087 NM_001285835 50490 Mm.31748 NM_015760 ENSMUSG00000030562 Nox4 AI648021 NADPH oxidase 4 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-6 chr1 152826199 152826581 + 1.01572999746118 NA intron (NM_010877, intron 7 of 15) intron (NM_010877, intron 7 of 15) 26237 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-23 chr2 102888782 102889010 + 1.01572999746118 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 12769 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-18 chr17 79372692 79372962 + 1.01572999746118 NA Intergenic Intergenic -17736 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-24 chr14 28806881 28807203 + 1.01572999746118 NA Intergenic Intergenic -211166 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-69 chr9 5345584 5345973 + 1.01572999746118 NA intron (NM_009808, intron 1 of 10) intron (NM_009808, intron 1 of 10) 302 NM_009808 12364 Mm.42163 NM_009808 ENSMUSG00000025887 Casp12 - caspase 12 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-50 chr4 88413775 88414021 + 1.01572999746118 NA 3' UTR (NM_025760, exon 7 of 7) 3' UTR (NM_025760, exon 7 of 7) 25028 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-38 chr2 128553291 128553544 + 1.01572999746118 NA Intergenic Intergenic -38924 NM_001310641 241634 Mm.297682 NM_001310641 ENSMUSG00000074812 Spdye4c Gm355|SpeedyB3|SpyB3 speedy/RINGO cell cycle regulator family, member E4C protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-14 chr11 80515760 80516013 + 1.01572999746118 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -6780 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-3 chr7 139256884 139257135 + 1.01572999746118 NA intron (NM_001098636, intron 2 of 2) intron (NM_001098636, intron 2 of 2) 8527 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-60 chr6 113418802 113418995 + 1.01572999746118 NA exon (NM_001346511, exon 2 of 9) exon (NM_001346511, exon 2 of 9) 442 NM_001033204 101122 Mm.31204 NM_001033204 ENSMUSG00000051169 Rpusd3 AI527266 RNA pseudouridylate synthase domain containing 3 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-32 chr7 98491934 98492213 + 1.01572999746118 NA Intergenic Intergenic -2149 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-36 chr9 6651573 6651804 + 1.01572999746118 NA Intergenic Intergenic -385141 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-74 chrX 6413506 6413883 + 1.01572999746118 NA intron (NM_001040459, intron 1 of 8) intron (NM_001040459, intron 1 of 8) -2048 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-13 chr11 3896061 3896388 + 1.01572999746118 NA intron (NM_173745, intron 1 of 1) intron (NM_173745, intron 1 of 1) 984 NM_173745 75219 Mm.32588 NM_173745 ENSMUSG00000047205 Dusp18 4930527G07Rik|AI430870|BB028064|DSP18|DUSP20|LMWDSP20 dual specificity phosphatase 18 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-63 chr7 139762285 139762678 + 1.01572999746118 NA Intergenic Intergenic -16537 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-27 chr15 37604888 37605187 + 1.01572999746118 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 75537 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-5 chr11 103131547 103131773 + 1.01572999746118 NA Intergenic Intergenic -1679 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-61 chr6 145908601 145908957 + 1.01572999746118 NA Intergenic Intergenic -23094 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-43 chr3 80978392 80978629 + 1.01572999746118 NA Intergenic Intergenic -57906 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-12 chr15 80056545 80056815 + 1.01572999746118 NA Intergenic Intergenic 21899 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-5 chr1 89816344 89816688 + 1.01572999746118 NA intron (NM_001037136, intron 12 of 16) intron (NM_001037136, intron 12 of 16) 114660 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-23 chr13 95526799 95527093 + 1.01572999746118 NA Intergenic Intergenic -1706 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-72 chr9 102727475 102727744 + 1.01572999746118 NA intron (NM_019764, intron 5 of 9) intron (NM_019764, intron 5 of 9) 9805 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118 chr1 130880342 130880546 + 1.01572999746118 NA intron (NM_026976, intron 7 of 7) intron (NM_026976, intron 7 of 7) 6967 NM_053095 93672 Mm.196691 NM_053095 ENSMUSG00000026420 Il24 FISP|Mda-7|Mda7|St16 interleukin 24 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-12 chr10 117720971 117721396 + 1.01572999746118 NA Intergenic B2_Mm2|SINE|B2 -10425 NM_001288586 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-64 chr8 3603825 3604017 + 1.01572999746118 NA exon (NM_001163749, exon 11 of 17) exon (NM_001163749, exon 11 of 17) 16471 NM_001347111 69697 Mm.390010 NM_027171 ENSMUSG00000044433 Camsap3 2310057J16Rik|Kiaa1543|Nezha calmodulin regulated spectrin-associated protein family, member 3 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-6 chr12 104859944 104860253 + 1.01572999746118 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 4978 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-17 chr17 32091684 32091939 + 1.01572999746118 NA promoter-TSS (NR_027316) promoter-TSS (NR_027316) -388 NR_027316 435518 Mm.328944 NR_027316 ENSMUSG00000002791 Pdxk-ps Gm9743 pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene pseudo unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-36 chr2 75693777 75693976 + 1.01572999746118 NA intron (NR_132727, intron 1 of 1) intron (NR_132727, intron 1 of 1) 10787 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-51 chr5 34582274 34582526 + 1.01572999746118 NA intron (NM_001024458, intron 1 of 14) intron (NM_001024458, intron 1 of 14) 8249 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-19 chr12 104823302 104823539 + 1.01572999746118 NA intron (NM_001040682, intron 1 of 12) intron (NM_001040682, intron 1 of 12) 41656 NR_104436 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-42 chr3 79992215 79992538 + 1.01572999746118 NA Intergenic Intergenic 106446 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118 chr1 24108395 24108606 + 1.01572999746118 NA Intergenic Intergenic -8159 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-16 chr17 25556666 25556980 + 1.01572999746118 NA Intergenic Intergenic 13863 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-4 chr1 84840731 84841114 + 1.01572999746118 NA intron (NM_025386, intron 1 of 3) intron (NM_025386, intron 1 of 3) 1081 NM_025386 66153 Mm.381192 NM_025386 ENSMUSG00000073633 Fbxo36 0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e F-box protein 36 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-22 chr13 34699681 34700067 + 1.01572999746118 NA Intergenic Intergenic -39768 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-26 chr5 64579862 64580157 + 1.01572999746118 NA Intergenic Intergenic 30690 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-15 chr11 83895180 83895408 + 1.01572999746118 NA intron (NM_009330, intron 7 of 8) intron (NM_009330, intron 7 of 8) 42334 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-7 chr13 6535382 6535679 + 1.01572999746118 NA Intergenic Intergenic -12627 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-52 chr5 36978175 36978442 + 1.01572999746118 NA intron (NM_011716, intron 2 of 7) intron (NM_011716, intron 2 of 7) 10674 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding common_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-2 chr17 62675764 62676010 + 1.01572999746118 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 205430 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-34 chr8 54557404 54557687 + 1.01572999746118 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 7214 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-30 chr6 147506209 147506502 + 1.01572999746118 NA intron (NM_001355715, intron 2 of 14) intron (NM_001355715, intron 2 of 14) 29990 NM_001355713 67015 Mm.209774 NM_025911 ENSMUSG00000030301 Ccdc91 1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56 coiled-coil domain containing 91 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-9 chr10 77129668 77129962 + 1.01572999746118 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -16110 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-3 chr7 28958263 28958487 + 1.01572999746118 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 3957 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-18 chr12 87388788 87389006 + 1.01572999746118 NA promoter-TSS (NM_011479) promoter-TSS (NM_011479) -542 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-35 chr2 33353277 33353534 + 1.01572999746118 NA intron (NM_001290570, intron 1 of 16) intron (NM_001290570, intron 1 of 16) 18089 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-25 chr4 89477178 89477474 + 1.01572999746118 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -166294 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-19 chr18 39378040 39378293 + 1.01572999746118 NA Intergenic Intergenic 109079 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-34 chr2 24976017 24976323 + 1.01572999746118 NA 5' UTR (NM_146251, exon 1 of 35) 5' UTR (NM_146251, exon 1 of 35) 137 NM_146251 241274 Mm.389243 NM_146251 ENSMUSG00000036833 Pnpla7 BC027342|E430013P11Rik|Nre patatin-like phospholipase domain containing 7 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-68 chr8 89044117 89044382 + 1.01572999746118 NA promoter-TSS (NM_021390) promoter-TSS (NM_021390) -87 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-8 chr13 15898549 15898813 + 1.01572999746118 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 91438 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-10 chr13 97197804 97198145 + 1.01572999746118 NA intron (NM_010422, intron 1 of 13) intron (NM_010422, intron 1 of 13) 383 NM_010422 15212 Mm.27816 NM_010422 ENSMUSG00000021665 Hexb - hexosaminidase B protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-56 chr5 134552529 134552718 + 1.01572999746118 NA promoter-TSS (NM_009990) promoter-TSS (NM_009990) -189 NM_009990 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-21 chr13 34695063 34695378 + 1.01572999746118 NA Intergenic Intergenic 42297 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 - predicted gene 15908 ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-31 chr19 8773662 8773893 + 1.01572999746118 NA promoter-TSS (NR_015538) promoter-TSS (NR_015538) 690 NR_028419 67706 Mm.45155 NM_026325 ENSMUSG00000003680 Tmem179b 0610031L02Rik|1500003K22Rik|1810059G22Rik transmembrane protein 179B protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-20 chr19 3926636 3926960 + 1.01572999746118 NA intron (NM_026316, intron 1 of 9) intron (NM_026316, intron 1 of 9) 2918 NM_026316 67689 Mm.109341 NM_026316 ENSMUSG00000024885 Aldh3b1 1700001N19Rik|ALDH4|ALDH7 aldehyde dehydrogenase 3 family, member B1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-58 chr5 146867914 146868156 + 1.01572999746118 NA Intergenic Intergenic 22964 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-15 chr17 6781680 6781948 + 1.01572999746118 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 966 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-13 chr16 13371726 13371998 + 1.01572999746118 NA intron (NM_153588, intron 1 of 14) intron (NM_153588, intron 1 of 14) 13441 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118 chr11 99500116 99500395 + 1.01572999746118 NA Intergenic Intergenic -7145 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-49 chr4 45492454 45492665 + 1.01572999746118 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 38269 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-33 chr19 56373100 56373366 + 1.01572999746118 NA intron (NM_198059, intron 11 of 40) intron (NM_198059, intron 11 of 40) 16805 NM_198059 18175 Mm.386769 NM_008733 ENSMUSG00000049134 Nrap - nebulin-related anchoring protein protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-28 chr6 37668763 37669067 + 1.01572999746118 NA Intergenic Intergenic 138742 NM_145364 208665 Mm.262635 NM_145364 ENSMUSG00000038641 Akr1d1 - aldo-keto reductase family 1, member D1 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-40 chr2 152226138 152226376 + 1.01572999746118 NA promoter-TSS (NM_007788) promoter-TSS (NM_007788) -583 NM_007788 12995 Mm.23692 NM_007788 ENSMUSG00000074698 Csnk2a1 CK2|Csnk2a1-rs4 casein kinase 2, alpha 1 polypeptide protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-9 chr13 34290881 34291187 + 1.01572999746118 NA intron (NM_001033167, intron 3 of 10) intron (NM_001033167, intron 3 of 10) 54148 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-2 chr1 40174486 40174677 + 1.01572999746118 NA Intergenic Intergenic -50499 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-30 chr19 5770107 5770344 + 1.01572999746118 NA exon (NM_001361921, exon 3 of 17) exon (NM_001361921, exon 3 of 17) 1194 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-59 chr6 38253812 38254071 + 1.01572999746118 NA promoter-TSS (NM_194061) promoter-TSS (NM_194061) 68 NM_194061 330286 Mm.277163 NM_194061 ENSMUSG00000063455 D630045J12Rik Kiaa1549|mKIAA1549 RIKEN cDNA D630045J12 gene protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-14 chr16 35425647 35425994 + 1.01572999746118 NA intron (NM_028295, intron 10 of 16) intron (NM_028295, intron 10 of 16) -61902 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-20 chr13 30667775 30668001 + 1.01572999746118 NA intron (NM_134068, intron 1 of 7) intron (NM_134068, intron 1 of 7) 7829 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-27 chr5 114443748 114444018 + 1.01572999746118 NA promoter-TSS (NM_023556) promoter-TSS (NM_023556) 144 NM_029956 77697 Mm.105182 NM_029956 ENSMUSG00000029575 Mmab 9130222L19Rik|ATR methylmalonic aciduria (cobalamin deficiency) cblB type homolog (human) protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-54 chr5 110659525 110659816 + 1.01572999746118 NA 3' UTR (NM_027156, exon 15 of 15) 3' UTR (NM_027156, exon 15 of 15) 6219 NM_027156 69663 Mm.5267 NM_027156 ENSMUSG00000029504 Ddx51 2310061O04Rik|AA537002|C81583|R75505 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-22 chr2 50463358 50463626 + 1.01572999746118 NA Intergenic Intergenic 108467 NR_154590 102634280 NR_154590 Gm48908 - predicted gene 48908 ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-7 chr1 162124285 162124593 + 1.01572999746118 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -93184 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-48 chr4 45480605 45480862 + 1.01572999746118 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 50095 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-32 chr19 26606250 26606460 + 1.01572999746118 NA intron (NM_011416, intron 1 of 32) CpG 1195 NM_011416 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-28 chr15 80710095 80710459 + 1.01572999746118 NA Intergenic Intergenic -1036 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-33 chr8 11171915 11172190 + 1.01572999746118 NA Intergenic Intergenic -140753 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-46 chr3 155039253 155039545 + 1.01572999746118 NA intron (NM_177066, intron 2 of 24) intron (NM_177066, intron 2 of 24) 16008 NM_177066 435766 Mm.210428 NM_177066 ENSMUSG00000040086 Tnni3k Cark|D830019J24Rik TNNI3 interacting kinase protein-coding unique_peak1_16_6_1.00953091485209_3.31212037948365_1.01572999746118-73 chr9 120014966 120015335 + 1.01572999746118 NA 3' UTR (NM_011724, exon 3 of 3) 3' UTR (NM_011724, exon 3 of 3) 8448 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding unique_peak2_6_14_-1.3610815426701_3.22634982427347_1.01572999746118-37 chr9 58249360 58249571 + 1.01572999746118 NA intron (NM_008884, intron 1 of 7) intron (NM_008884, intron 1 of 7) 321 NM_008884 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding common_peak2_149_152_-0.321308357886133_7.09673366374959_1.01571930473324 chr15 59782205 59783476 + 1.01571930473324 NA Intergenic Intergenic 12119 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_141_90_0.349771121934792_6.68268020116609_1.01551430626023 chr15 85566071 85567035 + 1.01551430626023 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 11517 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_141_90_0.349771121934792_6.68268020116609_1.01551430626023 chr1 132137798 132139654 + 1.01551430626023 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 959 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak2_207_204_-0.275106863770065_7.54192666762041_1.01523134828264 chr19 10524645 10526105 + 1.01523134828264 NA promoter-TSS (NM_025333) promoter-TSS (NM_025333) 131 NM_172302 269061 Mm.490260 NM_172302 ENSMUSG00000034820 Cpsf7 5730453I16Rik|AL022757|C330017N18Rik cleavage and polyadenylation specific factor 7 protein-coding common_peak1_278_190_0.247636936398698_7.7012472962351_1.01485702736366 chr8 70492517 70494273 + 1.01485702736366 NA exon (NM_018827, exon 1 of 9) exon (NM_018827, exon 1 of 9) 264 NM_018827 12931 Mm.335584 NM_018827 ENSMUSG00000007888 Crlf1 CLF-1|CRLM-3|CRLM3|NR6|NR6.1 cytokine receptor-like factor 1 protein-coding common_peak1_32_42_-0.659198770304339_5.09666536954993_1.01480426461253 chr10 19907390 19907690 + 1.01480426461253 NA exon (NM_008822, exon 1 of 10) exon (NM_008822, exon 1 of 10) 134 NM_008822 18634 Mm.338363 NM_008822 ENSMUSG00000020003 Pex7 MmPEX7 peroxisomal biogenesis factor 7 protein-coding common_peak1_50_27_0.583311537506303_5.09901069081076_1.01480426461253 chr1 45579898 45580498 + 1.01480426461253 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -76916 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak1_50_27_0.583311537506303_5.09901069081076_1.01480426461253-3 chr5 139793021 139793480 + 1.01480426461253 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 1714 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_32_42_-0.659198770304339_5.09666536954993_1.01480426461253-2 chr8 33895966 33896248 + 1.01480426461253 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 33756 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_32_42_-0.659198770304339_5.09666536954993_1.01480426461253-2 chr18 74216154 74216630 + 1.01480426461253 NA 5' UTR (NM_028868, exon 1 of 15) 5' UTR (NM_028868, exon 1 of 15) 180 NM_028868 74322 Mm.17537 NM_028868 ENSMUSG00000024560 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18 CXXC finger 1 (PHD domain) protein-coding common_peak2_32_42_-0.659198770304339_5.09666536954993_1.01480426461253 chr7 4789057 4789554 + 1.01480426461253 NA exon (NM_029384, exon 1 of 2) exon (NM_029384, exon 1 of 2) 255 NM_029384 664968 Mm.292837 NM_029384 ENSMUSG00000030431 Tmem238 2210411K11Rik transmembrane protein 238 protein-coding common_peak1_50_27_0.583311537506303_5.09901069081076_1.01480426461253-2 chr5 35004529 35005291 + 1.01480426461253 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 5832 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak1_50_27_0.583311537506303_5.09901069081076_1.01480426461253 chr4 47350022 47350907 + 1.01480426461253 NA Intergenic Intergenic -2758 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226 chr1 59439648 59439874 + 1.01466476204226 NA Intergenic Intergenic -42386 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-2 chr13 18790447 18790634 + 1.01466476204226 NA intron (NM_172120, intron 5 of 28) (CAGT)n|Simple_repeat|Simple_repeat 73248 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-10 chr17 70837491 70837703 + 1.01466476204226 NA Intergenic RSINE1|SINE|B4 9180 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226 chr3 37835759 37835997 + 1.01466476204226 NA Intergenic Intergenic -62935 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-19 chr9 61393305 61393512 + 1.01466476204226 NA intron (NM_001083928, intron 5 of 19) intron (NM_001083928, intron 5 of 19) 21042 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-5 chr11 118338195 118338404 + 1.01466476204226 NA intron (NM_021440, intron 2 of 2) intron (NM_021440, intron 2 of 2) 4235 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-6 chr18 44030683 44030913 + 1.01466476204226 NA intron (NM_001039218, intron 3 of 5) intron (NM_001039218, intron 3 of 5) 2929 NM_001039218 433178 Mm.120009 NM_001039218 ENSMUSG00000051050 Spink14 EG433178|Gm5505 serine peptidase inhibitor, Kazal type 14 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-16 chr5 135744424 135744619 + 1.01466476204226 NA promoter-TSS (NM_172541) promoter-TSS (NM_172541) -349 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-3 chr1 118399612 118399815 + 1.01466476204226 NA intron (NM_001359330, intron 1 of 39) PB1D9|SINE|Alu 10655 NM_001359334 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-10 chr2 102948901 102949203 + 1.01466476204226 NA Intergenic B4|SINE|B4 -47387 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-9 chr2 164520861 164521126 + 1.01466476204226 NA Intergenic Intergenic 23468 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-20 chr8 126683766 126683978 + 1.01466476204226 NA Intergenic RMER12C|LTR|ERVK -90436 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-18 chr8 77481469 77481694 + 1.01466476204226 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -35475 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-4 chr1 126801600 126801823 + 1.01466476204226 NA intron (NM_176957, intron 1 of 12) intron (NM_176957, intron 1 of 12) 28921 NM_176957 210356 Mm.377234 NM_172484 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5 NCK-associated protein 5 protein-coding common_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226 chr8 106737665 106737865 + 1.01466476204226 NA intron (NM_173037, intron 12 of 17) intron (NM_173037, intron 12 of 17) 54697 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-10 chr2 167715175 167715391 + 1.01466476204226 NA Intergenic Intergenic 24106 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-17 chr7 58842399 58842638 + 1.01466476204226 NA Intergenic Intergenic 184316 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-3 chr10 81400687 81400886 + 1.01466476204226 NA 3' UTR (NM_008688, exon 10 of 10) 3' UTR (NM_008688, exon 10 of 10) 7722 NM_001099917 72273 Mm.253147 NM_001099917 ENSMUSG00000078439 Smim24 2210404O07Rik small integral membrane protein 24 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-18 chr7 84302132 84302327 + 1.01466476204226 NA intron (NM_007488, intron 8 of 18) intron (NM_007488, intron 8 of 18) 107809 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak2_7_5_0.152132523069884_2.6610287622561_1.01466476204226 chr18 39932742 39932950 + 1.01466476204226 NA Intergenic Intergenic 159349 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-12 chr3 152529276 152529468 + 1.01466476204226 NA intron (NM_001355635, intron 7 of 8) intron (NM_001355635, intron 7 of 8) 132688 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding unique_peak2_8_5_0.320858707098037_2.74539185427017_1.01466476204226-2 chr11 86627645 86627867 + 1.01466476204226 NA intron (NM_001356531, intron 7 of 11) B2_Mm2|SINE|B2 43519 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-9 chr18 65744696 65744922 + 1.01466476204226 NA intron (NM_177028, intron 11 of 14) B1_Mur4|SINE|Alu 46541 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-16 chr7 47081028 47081231 + 1.01466476204226 NA intron (NM_001163565, intron 11 of 13) intron (NM_001163565, intron 11 of 13) 2095 NR_106023 102465639 NR_106023 ENSMUSG00000098960 Mir7056 Gm27696|mmu-mir-7056 microRNA 7056 ncRNA unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-12 chr4 40802169 40802414 + 1.01466476204226 NA Intergenic B1F|SINE|Alu -44406 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-11 chr3 37836024 37836225 + 1.01466476204226 NA Intergenic Intergenic -62689 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-4 chr13 47217729 47217956 + 1.01466476204226 NA intron (NM_146042, intron 2 of 7) intron (NM_146042, intron 2 of 7) 23839 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding unique_peak2_8_5_0.320858707098037_2.74539185427017_1.01466476204226-3 chr11 104616764 104616987 + 1.01466476204226 NA intron (NM_016780, intron 1 of 14) L2c|LINE|L2 8875 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-18 chr7 99138836 99139075 + 1.01466476204226 NA intron (NM_178635, intron 1 of 14) ID_B1|SINE|B4 2189 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-2 chr4 155870226 155870475 + 1.01466476204226 NA promoter-TSS (NM_024472) promoter-TSS (NM_024472) 783 NM_028020 71957 Mm.475640 NM_028020 ENSMUSG00000029034 Ints11 2410006F12Rik|AU044035|Cpsf3l integrator complex subunit 11 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-11 chr2 90487590 90487791 + 1.01466476204226 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -8516 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-5 chr18 35192850 35193042 + 1.01466476204226 NA intron (NM_009818, intron 7 of 17) B1_Mur1|SINE|Alu 22078 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-4 chr10 86195323 86195529 + 1.01466476204226 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 99572 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-15 chr6 124756789 124757007 + 1.01466476204226 NA promoter-TSS (NM_007881) promoter-TSS (NM_007881) -411 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-6 chr10 117024290 117024510 + 1.01466476204226 NA exon (NM_001007583, exon 10 of 10) exon (NM_001007583, exon 10 of 10) -20941 NM_146242 237560 Mm.37320 NM_146242 ENSMUSG00000060187 Lrrc10 D330003I11Rik|Hrlrrp|Serdin1 leucine rich repeat containing 10 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-19 chr7 139839274 139839490 + 1.01466476204226 NA intron (NM_177469, intron 2 of 7) intron (NM_177469, intron 2 of 7) 5208 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-5 chr1 162137771 162138042 + 1.01466476204226 NA intron (NM_001038619, intron 14 of 20) B1F2|SINE|Alu -79717 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226 chr12 82274792 82274986 + 1.01466476204226 NA intron (NM_001167983, intron 3 of 23) intron (NM_001167983, intron 3 of 23) -36460 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-14 chr6 33873868 33874071 + 1.01466476204226 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -155479 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-14 chr6 72000188 72000398 + 1.01466476204226 NA Intergenic Intergenic 42235 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-8 chr16 31273655 31273863 + 1.01466476204226 NA intron (NM_025800, intron 1 of 5) intron (NM_025800, intron 1 of 5) 1518 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-7 chr13 24547691 24547900 + 1.01466476204226 NA Intergenic Intergenic -34394 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak2_7_5_0.152132523069884_2.6610287622561_1.01466476204226 chr13 13538982 13539197 + 1.01466476204226 NA Intergenic MIRc|SINE|MIR -51320 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-7 chr2 75768628 75768817 + 1.01466476204226 NA Intergenic L1MB8|LINE|L1 -63455 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding unique_peak2_8_5_0.320858707098037_2.74539185427017_1.01466476204226 chr1 135791567 135791774 + 1.01466476204226 NA Intergenic Intergenic -7751 NM_021467 21952 Mm.44379 NM_021467 ENSMUSG00000026418 Tnni1 2700018B22Rik|AI747285|ssTnI troponin I, skeletal, slow 1 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-2 chr10 67731137 67731372 + 1.01466476204226 NA Intergenic B3A|SINE|B2 -159295 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-17 chr5 136562829 136563049 + 1.01466476204226 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 3042 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-13 chr3 107791523 107791788 + 1.01466476204226 NA Intergenic B1_Mus1|SINE|Alu -31186 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_7_5_0.152132523069884_2.6610287622561_1.01466476204226-4 chrX 163938359 163938576 + 1.01466476204226 NA intron (NM_009453, intron 10 of 10) PB1D10|SINE|Alu 20199 NM_009453 22184 Mm.426178 NM_009453 ENSMUSG00000031370 Zrsr2 35kDa|5031411E02Rik|A230052C13Rik|C77286|U2af1-rs2|URP zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-14 chr5 35018709 35018930 + 1.01466476204226 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) -2230 NR_037280 100526557 NR_037280 ENSMUSG00000093097 Mir3097 mir-3097|mmu-mir-3097 microRNA 3097 ncRNA unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-2 chr1 66814130 66814333 + 1.01466476204226 NA intron (NM_001357156, intron 1 of 14) PB1D11|SINE|Alu 3364 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding unique_peak2_7_5_0.152132523069884_2.6610287622561_1.01466476204226-3 chr9 75523670 75523894 + 1.01466476204226 NA intron (NM_001357828, intron 3 of 10) Lx6|LINE|L1 35875 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-3 chr13 41571315 41571513 + 1.01466476204226 NA Intergenic Intergenic -34802 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-8 chr18 16746425 16746617 + 1.01466476204226 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 62725 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-17 chr8 25621326 25621526 + 1.01466476204226 NA intron (NM_001001735, intron 1 of 9) intron (NM_001001735, intron 1 of 9) 19142 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226 chr1 87030146 87030358 + 1.01466476204226 NA intron (NM_001172157, intron 15 of 21) intron (NM_001172157, intron 15 of 21) 59676 NM_007433 11650 Mm.195224 NM_007433 ENSMUSG00000026246 Alppl2 Akp5|C77216|D1Ertd816e|EAP alkaline phosphatase, placental-like 2 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-19 chr8 54552487 54552692 + 1.01466476204226 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 2258 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-8 chr2 148537533 148537742 + 1.01466476204226 NA Intergenic Intergenic -94102 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-15 chr5 92905943 92906134 + 1.01466476204226 NA intron (NM_001077596, intron 1 of 9) intron (NM_001077596, intron 1 of 9) 8045 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-12 chr2 167537599 167537810 + 1.01466476204226 NA promoter-TSS (NM_011427) promoter-TSS (NM_011427) -491 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-13 chr4 150054548 150054783 + 1.01466476204226 NA Intergenic ID4|SINE|ID -13789 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak2_7_5_0.152132523069884_2.6610287622561_1.01466476204226-2 chr19 58106842 58107054 + 1.01466476204226 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 55781 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-20 chrX 71465206 71465505 + 1.01466476204226 NA intron (NM_001199349, intron 1 of 9) ID_B1|SINE|B4 27494 NM_138309 171486 Mm.283879 NM_138309 ENSMUSG00000035776 Cd99l2 AW548191|Mic2l1|Xap89 CD99 antigen-like 2 protein-coding common_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226 chr14 73235306 73235511 + 1.01466476204226 NA intron (NM_009029, intron 17 of 26) intron (NM_009029, intron 17 of 26) -2483 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-7 chr13 107826006 107826233 + 1.01466476204226 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 63945 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-16 chr6 134641644 134641855 + 1.01466476204226 NA intron (NM_026371, intron 1 of 3) intron (NM_026371, intron 1 of 3) 809 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak1_8_5_0.320858707098037_2.74539185427017_1.01466476204226-13 chr4 137278029 137278226 + 1.01466476204226 NA intron (NM_009523, intron 1 of 4) intron (NM_009523, intron 1 of 4) 492 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-6 chr12 110609371 110609560 + 1.01466476204226 NA intron (NM_030238, intron 1 of 76) B1_Mur3|SINE|Alu 8070 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-15 chr6 83244032 83244221 + 1.01466476204226 NA intron (NM_001166067, intron 2 of 24) intron (NM_001166067, intron 2 of 24) 6751 NM_001166067 232156 Mm.333189 NM_001166067 ENSMUSG00000068323 Slc4a5 C330006M16|C330016K18Rik solute carrier family 4, sodium bicarbonate cotransporter, member 5 protein-coding unique_peak2_5_7_-0.675014394408261_2.66249280279587_1.01466476204226-9 chr17 64559805 64560005 + 1.01466476204226 NA Intergenic Intergenic -4315 NR_045899 100043582 Mm.11170 NR_045899 ENSMUSG00000073377 AU016765 - expressed sequence AU016765 ncRNA unique_peak1_7_5_0.152132523069884_2.6610287622561_1.01466476204226-11 chr3 57075404 57075630 + 1.01466476204226 NA Intergenic Intergenic 226471 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_121_76_0.373314549034731_6.45344381521227_1.01391271057447 chr11 102316879 102317810 + 1.01391271057447 NA promoter-TSS (NM_001044383) promoter-TSS (NM_001044383) -57 NM_001044383 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak2_121_76_0.373314549034731_6.45344381521227_1.01391271057447-2 chr9 107632606 107633768 + 1.01391271057447 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 2155 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_92_100_-0.406926340971558_6.45474831226602_1.01391271057444 chr6 134897506 134898770 + 1.01391271057444 NA promoter-TSS (NM_001167696) promoter-TSS (NM_001167696) 56 NM_001362050 14760 Mm.4787 NM_008157 ENSMUSG00000032641 Gpr19 - G protein-coupled receptor 19 protein-coding common_peak1_76_85_-0.445430302530909_6.20354960343664_1.01379877677007 chr4 155992915 155993861 + 1.01379877677007 NA promoter-TSS (NM_001302468) promoter-TSS (NM_001302468) 51 NM_001302468 20318 Mm.293517 NM_011341 ENSMUSG00000029076 Sdf4 Cab45 stromal cell derived factor 4 protein-coding common_peak2_101_108_-0.384572844786264_6.57589790238379_1.01363328297312 chr11 59449867 59451181 + 1.01363328297312 NA promoter-TSS (NM_001356452) promoter-TSS (NM_001356452) 479 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak2_101_108_-0.384572844786264_6.57589790238379_1.01363328297312-2 chr12 79647969 79649980 + 1.01363328297312 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 275759 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_100_108_-0.398686425519513_6.56884111201717_1.01363328297312 chr1 92129325 92130572 + 1.01363328297312 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 50393 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_68_78_-0.480091844153394_6.06373482610041_1.01326644666511 chr11 86645750 86646468 + 1.01326644666511 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 25166 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_68_78_-0.480091844153394_6.06373482610041_1.01326644666511 chr12 4234026 4234584 + 1.01326644666511 NA promoter-TSS (NM_001361641) promoter-TSS (NM_001361641) 278 NM_001204912 69709 Mm.250552 NM_001204912 ENSMUSG00000096199 Ptrhd1 2410017P09Rik peptidyl-tRNA hydrolase domain containing 1 protein-coding common_peak2_69_78_-0.459479735204544_6.07404088057483_1.01326644666511 chr2 24451938 24453181 + 1.01326644666511 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 23040 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_94_57_0.423784378598209_6.06987318442668_1.0132664466651 chr1 45626213 45626831 + 1.0132664466651 NA Intergenic Intergenic -123240 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_138_143_-0.342947950059226_6.9984510264127_1.0131325950261 chr10 59907236 59908826 + 1.0131325950261 NA Intergenic Intergenic 28440 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_174_114_0.311412881208819_7.00119649154878_1.0131325950261 chr12 72760508 72762093 + 1.0131325950261 NA promoter-TSS (NM_008910) promoter-TSS (NM_008910) 89 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding common_peak2_220_216_-0.270332204017198_7.62638513043588_1.01267581929393 chr15 34082102 34083585 + 1.01267581929393 NA 5' UTR (NM_026002, exon 1 of 12) 5' UTR (NM_026002, exon 1 of 12) 124 NM_001357925 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak2_152_98_0.335090462138508_6.79690185114886_1.01264161286355 chr11 5851350 5852423 + 1.01264161286355 NA Intergenic Intergenic -9980 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding common_peak1_224_150_0.278510347708895_7.37765991317953_1.01232707318595 chr5 24423903 24425985 + 1.01232707318595 NA promoter-TSS (NM_009207) promoter-TSS (NM_009207) -288 NM_009207 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding common_peak2_163_106_0.322437601626048_6.90268578721417_1.01199564318382 chr1 134560044 134561364 + 1.01199564318382 NA intron (NM_152895, intron 1 of 26) CpG 526 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak2_279_191_0.245228553104916_7.70757677727361_1.01144081641387 chr7 144468641 144470746 + 1.01144081641387 NA intron (NM_001357116, intron 1 of 15) intron (NM_001357116, intron 1 of 15) 1242 NM_007803 13043 Mm.205601 NM_007803 ENSMUSG00000031078 Cttn 1110020L01Rik|Ems1 cortactin protein-coding common_peak2_195_194_-0.288082129530045_7.46328924898459_1.01122653499618 chr17 35821679 35823797 + 1.01122653499618 NA promoter-TSS (NM_008027) promoter-TSS (NM_008027) -619 NM_008027 14251 Mm.2931 NM_008027 ENSMUSG00000059714 Flot1 reggie-2 flotillin 1 protein-coding common_peak2_55_65_-0.519750005139773_5.78451911678857_1.01073730818493-3 chr5 3500985 3501689 + 1.01073730818493 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -42496 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_55_65_-0.519750005139773_5.78451911678857_1.01073730818493-2 chr2 75832160 75832857 + 1.01073730818493 NA exon (NM_172666, exon 1 of 20) exon (NM_172666, exon 1 of 20) 331 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding common_peak1_78_46_0.462978814597639_5.78607825897646_1.01073730818493 chr12 31059210 31060038 + 1.01073730818493 NA Intergenic Intergenic -14344 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding common_peak1_78_46_0.462978814597639_5.78607825897646_1.01073730818493-2 chr13 15804274 15805159 + 1.01073730818493 NA Intergenic Intergenic -2086 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak1_55_65_-0.519750005139773_5.78451911678857_1.01073730818493-2 chr9 95954836 95955310 + 1.01073730818493 NA intron (NM_001311130, intron 1 of 41) CpG 313 NM_011916 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak2_55_65_-0.519750005139773_5.78451911678857_1.01073730818493 chr15 58872711 58873331 + 1.01073730818493 NA exon (NM_026642, exon 1 of 1) exon (NM_026642, exon 1 of 1) 372 NM_026642 68260 Mm.278805 NM_026642 ENSMUSG00000037085 Trmt12 4632406N01Rik|AI449275|Tyw2 tRNA methyltranferase 12 protein-coding common_peak1_78_46_0.462978814597639_5.78607825897646_1.01073730818493-4 chr4 45512842 45513915 + 1.01073730818493 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 17450 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_78_46_0.462978814597639_5.78607825897646_1.01073730818493 chr15 38920862 38921592 + 1.01073730818493 NA Intergenic Intergenic -12682 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_55_65_-0.519750005139773_5.78451911678857_1.01073730818493 chr2 29715990 29716810 + 1.01073730818493 NA intron (NM_001039086, intron 11 of 25) intron (NM_001039086, intron 11 of 25) -45128 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding common_peak1_78_46_0.462978814597639_5.78607825897646_1.01073730818493-3 chr17 27038896 27039515 + 1.01073730818493 NA Intergenic Intergenic 9946 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_55_65_-0.519750005139773_5.78451911678857_1.01073730818493-5 chr5 77388059 77388718 + 1.01073730818493 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 19657 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_55_65_-0.519750005139773_5.78451911678857_1.01073730818493-4 chr5 77355290 77356346 + 1.01073730818493 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 45334 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak1_64_36_0.528686728006798_5.47379672963235_1.01050013482524 chr11 103684235 103685184 + 1.01050013482524 NA intron (NM_019650, intron 4 of 5) MIR3|SINE|MIR 13001 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak2_63_36_0.506476719442357_5.46269172535013_1.01050013482524-2 chr4 109666812 109667460 + 1.01050013482524 NA promoter-TSS (NM_001301368) promoter-TSS (NM_001301368) -380 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_63_36_0.506476719442357_5.46269172535013_1.01050013482524 chr3 40745285 40745880 + 1.01050013482524 NA promoter-TSS (NM_011020) promoter-TSS (NM_011020) -31 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak1_63_36_0.506476719442357_5.46269172535013_1.01050013482524 chr1 189007345 189007864 + 1.01050013482524 NA exon (NM_172650, exon 1 of 18) exon (NM_172650, exon 1 of 18) 236 NM_001359577 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding common_peak1_63_36_0.506476719442357_5.46269172535013_1.01050013482524-2 chr11 116816093 116816834 + 1.01050013482524 NA intron (NM_001347633, intron 1 of 4) B3|SINE|B2 11583 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak1_64_36_0.528686728006798_5.47379672963235_1.01050013482524-2 chr4 109666843 109667506 + 1.01050013482524 NA promoter-TSS (NM_001301368) promoter-TSS (NM_001301368) -418 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_64_36_0.528686728006798_5.47379672963235_1.01050013482524 chr15 75942256 75942712 + 1.01050013482524 NA intron (NM_030199, intron 1 of 1) intron (NM_030199, intron 1 of 1) 1532 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding common_peak1_63_36_0.506476719442357_5.46269172535013_1.01050013482524-3 chr3 121574435 121575316 + 1.01050013482524 NA Intergenic Intergenic -42531 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak2_64_36_0.528686728006798_5.47379672963235_1.01050013482524-2 chr2 27677387 27677977 + 1.01050013482524 NA intron (NM_011305, intron 1 of 9) CpG 481 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_498_457_-0.181280868483677_8.7485633538551_1.00991779736138 chr15 77838608 77844000 + 1.00991779736138 NA intron (NM_022410, intron 1 of 40) CpG 871 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_310_214_0.232417214417926_7.86440145679842_1.00909410057742 chr9 67046394 67049135 + 1.00909410057742 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) 1449 NM_001164255 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_266_181_0.254293208855444_7.63494124462642_1.00908988105419 chr8 70508527 70511116 + 1.00908988105419 NA promoter-TSS (NR_151735) promoter-TSS (NR_151735) 124 NM_001348229 22186 Mm.297372 NM_019883 ENSMUSG00000090137 Uba52 Cep52|D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc ubiquitin A-52 residue ribosomal protein fusion product 1 protein-coding common_peak2_142_91_0.34405659720412_6.69559025465907_1.00860794703809 chr2 173265274 173266362 + 1.00860794703809 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 10715 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_71_41_0.4923388463207_5.63848684593911_1.00843637445776-2 chr3 79591485 79591862 + 1.00843637445776 NA intron (NM_001356326, intron 1 of 10) CpG 336 NM_026352 67738 Mm.295252 NM_026352 ENSMUSG00000027804 Ppid 4930564J03Rik|CYP-40|Ppidl|Ppif peptidylprolyl isomerase D (cyclophilin D) protein-coding common_peak2_49_59_-0.54459173345621_5.63459472888041_1.00843637445776-2 chr3 51197706 51198648 + 1.00843637445776 NA Intergenic Intergenic -26270 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_71_41_0.4923388463207_5.63848684593911_1.00843637445776-3 chr4 129247743 129248227 + 1.00843637445776 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) 458 NM_001033189 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak2_71_41_0.4923388463207_5.63848684593911_1.00843637445776 chr1 155238524 155239193 + 1.00843637445776 NA Intergenic Intergenic 80155 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_71_41_0.4923388463207_5.63848684593911_1.00843637445776 chr12 76961528 76962190 + 1.00843637445776 NA intron (NM_001361663, intron 1 of 4) CpG 389 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_49_59_-0.54459173345621_5.63459472888041_1.00843637445776 chr11 80141757 80142425 + 1.00843637445776 NA promoter-TSS (NM_183275) promoter-TSS (NM_183275) 62 NM_183275 68550 Mm.18466 NM_183275 ENSMUSG00000046909 Tefm 1110002N22Rik transcription elongation factor, mitochondrial protein-coding common_peak2_84_93_-0.432156075160552_6.33851081409736_1.00811678756175 chr9 102636562 102637635 + 1.00811678756175 NA Intergenic Intergenic 10802 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_85_93_-0.415401301041449_6.34688820115691_1.00811678756175 chr3 41182154 41183599 + 1.00811678756175 NA Intergenic Intergenic -99830 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_113_70_0.393196957694674_6.34634559835202_1.00811678756175 chr7 80837647 80839021 + 1.00811678756175 NA Intergenic Intergenic -23774 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_225_151_0.275340208643422_7.3855976177653_1.00806666077784 chr17 67352736 67354855 + 1.00806666077784 NA intron (NM_001357625, intron 1 of 32) CpG 664 NM_008984 19274 Mm.311809 NM_008984 ENSMUSG00000033278 Ptprm RPTPmu|mKIAA4044 protein tyrosine phosphatase, receptor type, M protein-coding common_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329 chr10 77541766 77542049 + 1.00793137938329 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 11559 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329 chr14 20924524 20924774 + 1.00793137938329 NA Intergenic Intergenic -4749 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-15 chr2 29967294 29967549 + 1.00793137938329 NA intron (NM_001177668, intron 1 of 55) B1F|SINE|Alu 1861 NM_001309460 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-10 chr16 34784342 34784560 + 1.00793137938329 NA promoter-TSS (NM_139300) promoter-TSS (NM_139300) -499 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329 chr1 153585245 153585444 + 1.00793137938329 NA Intergenic Intergenic -35630 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-7 chr17 84195566 84195819 + 1.00793137938329 NA intron (NM_183021, intron 36 of 37) B1_Mur1|SINE|Alu -7745 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-2 chr15 52999536 52999810 + 1.00793137938329 NA Intergenic Intergenic 287228 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-17 chr5 99241589 99241777 + 1.00793137938329 NA intron (NM_181318, intron 2 of 13) intron (NM_181318, intron 2 of 13) 11244 NM_181318 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-7 chr10 69719661 69719899 + 1.00793137938329 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 186072 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-13 chr2 60171471 60171706 + 1.00793137938329 NA Intergenic Intergenic -38348 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-4 chr13 110725201 110725390 + 1.00793137938329 NA Intergenic Intergenic -178204 NR_131193 75139 Mm.490931 NR_131193 ENSMUSG00000114472 Gm38397 - predicted gene, 38397 ncRNA unique_peak1_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-2 chr12 100724432 100724628 + 1.00793137938329 NA intron (NM_153587, intron 1 of 17) intron (NM_153587, intron 1 of 17) 590 NM_001330702 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-20 chr7 62419753 62419951 + 1.00793137938329 NA exon (NM_011746, exon 1 of 1) exon (NM_011746, exon 1 of 1) 287 NM_011746 22652 Mm.146 NM_011746 ENSMUSG00000070527 Mkrn3 D7H15S9-1|Zfp127 makorin, ring finger protein, 3 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-14 chr19 34856785 34857087 + 1.00793137938329 NA intron (NM_001114339, intron 1 of 6) intron (NM_001114339, intron 1 of 6) 20981 NM_023792 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding common_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-2 chr10 27652393 27652581 + 1.00793137938329 NA Intergenic Intergenic -35545 NM_008481 16773 Mm.256087 NM_008481 ENSMUSG00000019899 Lama2 5830440B04|dy|mKIAA4087|mer|merosin laminin, alpha 2 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-20 chr6 25809566 25809769 + 1.00793137938329 NA promoter-TSS (NM_133931) promoter-TSS (NM_133931) -441 NM_133931 101185 Mm.274589 NM_133931 ENSMUSG00000029676 Pot1a 1500031H18Rik|AI851169|Pot1 protection of telomeres 1A protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-9 chr15 102112711 102112947 + 1.00793137938329 NA exon (NM_153533, exon 20 of 29) exon (NM_153533, exon 20 of 29) 9895 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-18 chr6 29212400 29212592 + 1.00793137938329 NA promoter-TSS (NM_011829) promoter-TSS (NM_011829) -199 NM_011829 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine monophosphate dehydrogenase 1 protein-coding common_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329 chr12 79514569 79514764 + 1.00793137938329 NA intron (NM_009014, intron 7 of 10) L4_C_Mam|LINE|RTE-X 217315 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-3 chr18 60713449 60713660 + 1.00793137938329 NA 5' UTR (NM_001348101, exon 2 of 15) 5' UTR (NM_001348101, exon 2 of 15) 14012 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-10 chr16 30971861 30972065 + 1.00793137938329 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 109469 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-16 chr4 148447991 148448203 + 1.00793137938329 NA promoter-TSS (NM_020009) promoter-TSS (NM_020009) -485 NM_020009 56717 Mm.21158 NM_020009 ENSMUSG00000028991 Mtor 2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat mechanistic target of rapamycin kinase protein-coding unique_peak1_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-3 chr7 144751645 144751857 + 1.00793137938329 NA Intergenic Intergenic -13159 NM_001242349 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-15 chr2 126002121 126002364 + 1.00793137938329 NA intron (NM_029455, intron 13 of 16) intron (NM_029455, intron 13 of 16) -32416 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-23 chr8 33819570 33819835 + 1.00793137938329 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -71932 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-17 chr5 4495304 4495575 + 1.00793137938329 NA Intergenic Intergenic 262777 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-5 chr10 4269084 4269382 + 1.00793137938329 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 2904 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-6 chr6 142360631 142360833 + 1.00793137938329 NA TTS (NM_023042) TTS (NM_023042) 15035 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329 chr1 88764324 88764563 + 1.00793137938329 NA Intergenic Intergenic 9553 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-4 chr16 22733728 22733934 + 1.00793137938329 NA Intergenic Intergenic -76600 NM_001346673 110197 Mm.194986 NM_138650 ENSMUSG00000022861 Dgkg 2900055E17Rik|90kDa|AI854428|Dagk3|E430001K23Rik|mKIAA4131 diacylglycerol kinase, gamma protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-11 chr9 43261566 43261778 + 1.00793137938329 NA intron (NM_001243261, intron 1 of 2) intron (NM_001243261, intron 1 of 2) 1793 NM_001243261 235302 Mm.135745 NM_001243261 D630033O11Rik Gm588 RIKEN cDNA D630033O11 gene protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-14 chr2 26056450 26056665 + 1.00793137938329 NA 3' UTR (NM_026495, exon 6 of 6) 3' UTR (NM_026495, exon 6 of 6) -34797 NM_133835 98766 Mm.247824 NM_133835 ENSMUSG00000036352 Ubac1 1110033G07Rik|AA407978|GBDR1|Gdbr1|Kpc2|Ubadc1 ubiquitin associated domain containing 1 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-8 chr12 95491761 95491974 + 1.00793137938329 NA Intergenic Intergenic -200359 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-26 chr9 67065796 67066005 + 1.00793137938329 NA Intergenic Intergenic -16687 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-22 chr7 113154341 113154549 + 1.00793137938329 NA Intergenic Intergenic -12430 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-2 chr10 7161563 7161776 + 1.00793137938329 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 50568 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329 chr10 93356471 93356678 + 1.00793137938329 NA Intergenic Intergenic 20363 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329 chr16 52060266 52060488 + 1.00793137938329 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 28828 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-4 chr2 60878591 60878782 + 1.00793137938329 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 2752 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-5 chr16 24438154 24438408 + 1.00793137938329 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -9810 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-3 chr15 76479126 76479331 + 1.00793137938329 NA intron (NR_138588, intron 1 of 10) intron (NR_138588, intron 1 of 10) 1866 NR_138589 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185|HSTF|HSTF 1|Hsf1alpha|Hsf1beta heat shock factor 1 protein-coding common_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-5 chr4 136450524 136450712 + 1.00793137938329 NA Intergenic Intergenic -19143 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-6 chr13 70772763 70773015 + 1.00793137938329 NA non-coding (NR_137640, exon 12 of 23) non-coding (NR_137640, exon 12 of 23) 68922 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-25 chr9 50169831 50170079 + 1.00793137938329 NA Intergenic Intergenic 63227 NR_131161 71873 NR_131161 ENSMUSG00000110916 2310003N18Rik - RIKEN cDNA 2310003N18 gene ncRNA unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-13 chr17 73984139 73984342 + 1.00793137938329 NA Intergenic Intergenic -34044 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-11 chr15 88848970 88849169 + 1.00793137938329 NA Intergenic Intergenic -13125 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-2 chr15 90495032 90495239 + 1.00793137938329 NA intron (NM_001357979, intron 18 of 18) intron (NM_001357979, intron 18 of 18) 141425 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-6 chr11 79644416 79644625 + 1.00793137938329 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -21357 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-2 chr15 60693122 60693358 + 1.00793137938329 NA Intergenic Intergenic -129725 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-8 chr6 35382038 35382268 + 1.00793137938329 NA Intergenic Intergenic 51307 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-4 chr16 34856167 34856405 + 1.00793137938329 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 71336 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-14 chr2 125939421 125939648 + 1.00793137938329 NA intron (NM_175154, intron 7 of 9) intron (NM_175154, intron 7 of 9) 73311 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-12 chr16 57428786 57429023 + 1.00793137938329 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 75627 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-7 chr7 73536509 73536724 + 1.00793137938329 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 5130 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-6 chr10 24399012 24399199 + 1.00793137938329 NA Intergenic Intergenic 175588 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-5 chr11 59207924 59208183 + 1.00793137938329 NA promoter-TSS (NM_024210) promoter-TSS (NM_024210) -308 NM_024210 67862 Mm.358708 NM_024210 ENSMUSG00000020441 2310033P09Rik Mmtag2 RIKEN cDNA 2310033P09 gene protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-5 chr11 102895021 102895238 + 1.00793137938329 NA intron (NM_001131020, intron 3 of 7) intron (NM_001131020, intron 3 of 7) 2071 NM_001131020 14580 Mm.1239 NM_010277 ENSMUSG00000020932 Gfap AI836096 glial fibrillary acidic protein protein-coding unique_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-5 chr8 79597054 79597275 + 1.00793137938329 NA Intergenic Intergenic -42512 NM_001256033 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-22 chrX 103987258 103987507 + 1.00793137938329 NA Intergenic Intergenic -6097 NM_011276 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding common_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329 chr1 152767740 152767950 + 1.00793137938329 NA intron (NM_026369, intron 1 of 3) intron (NM_026369, intron 1 of 3) 1303 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-20 chr9 75529234 75529442 + 1.00793137938329 NA intron (NM_001357828, intron 3 of 10) intron (NM_001357828, intron 3 of 10) 30319 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-11 chr16 91523158 91523509 + 1.00793137938329 NA Intergenic Intergenic 4211 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA common_peak1_7_8_-0.432829977651272_2.95351001261668_1.00793137938329 chr18 60604212 60604400 + 1.00793137938329 NA 5' UTR (NM_001109975, exon 2 of 2) 5' UTR (NM_001109975, exon 2 of 2) 5798 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-3 chr11 76844890 76845077 + 1.00793137938329 NA intron (NM_007754, intron 1 of 20) intron (NM_007754, intron 1 of 20) 2025 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-6 chr5 121713293 121713526 + 1.00793137938329 NA intron (NM_009125, intron 1 of 24) intron (NM_009125, intron 1 of 24) 1800 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-4 chr11 72595480 72595824 + 1.00793137938329 NA Intergenic L2|LINE|L2 -11609 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-4 chr10 18845270 18845471 + 1.00793137938329 NA exon (NM_022032, exon 1 of 3) exon (NM_022032, exon 1 of 3) 299 NM_022032 64058 Mm.28209 NM_022032 ENSMUSG00000019851 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector protein-coding common_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-3 chr3 126335695 126335901 + 1.00793137938329 NA Intergenic Intergenic -28054 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329 chr1 63768040 63768244 + 1.00793137938329 NA intron (NM_001256158, intron 2 of 2) intron (NM_001256158, intron 2 of 2) 1125 NM_001256158 74426 Mm.159197 NM_001256158 ENSMUSG00000025961 4933402D24Rik - RIKEN cDNA 4933402D24 gene protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-4 chr1 184845041 184845249 + 1.00793137938329 NA intron (NM_133684, intron 1 of 7) intron (NM_133684, intron 1 of 7) 702 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-18 chr5 17296771 17296977 + 1.00793137938329 NA Intergenic Intergenic -179248 NM_027609 70935 Mm.332225 NM_027609 ENSMUSG00000058643 Speer4f1 4922502J04Rik|SPEER-4F|Speer4f spermatogenesis associated glutamate (E)-rich protein 4F1 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-21 chr9 65744386 65744660 + 1.00793137938329 NA intron (NM_172536, intron 2 of 9) intron (NM_172536, intron 2 of 9) 67975 NM_001301307 18247 Mm.116749 NM_010952 ENSMUSG00000040652 Oaz2 AZ-2|AZ2|Oaz2-ps|Sez15 ornithine decarboxylase antizyme 2 protein-coding unique_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-2 chr17 13866777 13866996 + 1.00793137938329 NA intron (NR_151731, intron 22 of 33) intron (NR_151731, intron 22 of 33) -81487 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-19 chr4 150282929 150283128 + 1.00793137938329 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 1112 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-2 chr12 84846348 84846561 + 1.00793137938329 NA intron (NM_013589, intron 3 of 34) Tigger7|DNA|TcMar-Tigger -29348 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-3 chr16 4077113 4077338 + 1.00793137938329 NA intron (NR_152409, intron 1 of 17) intron (NR_152409, intron 1 of 17) 585 NR_152409 68015 Mm.123366 NM_026508 ENSMUSG00000005981 Trap1 2410002K23Rik|HSP75 TNF receptor-associated protein 1 protein-coding common_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-3 chr8 22481070 22481282 + 1.00793137938329 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -4297 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-3 chr1 151679423 151679628 + 1.00793137938329 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) 75202 NR_151474 102640772 NR_151473 ENSMUSG00000100594 2810414N06Rik - RIKEN cDNA 2810414N06 gene ncRNA unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329 chr1 161070331 161070537 + 1.00793137938329 NA promoter-TSS (NR_131028) promoter-TSS (NR_131028) 226 NM_172644 226539 Mm.28125 NM_172644 ENSMUSG00000026709 Dars2 5830468K18Rik|aspRS aspartyl-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-11 chr16 43464014 43464215 + 1.00793137938329 NA intron (NM_181058, intron 3 of 6) intron (NM_181058, intron 3 of 6) -43918 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-27 chr9 99133888 99134099 + 1.00793137938329 NA intron (NM_029094, intron 1 of 23) RSINE1|SINE|B4 6218 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-8 chr3 38074592 38074801 + 1.00793137938329 NA Intergenic Intergenic 133423 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-3 chr15 59975194 59975425 + 1.00793137938329 NA Intergenic Intergenic 41309 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-2 chr5 51191183 51191482 + 1.00793137938329 NA Intergenic Intergenic 362589 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-3 chr1 152063992 152064207 + 1.00793137938329 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 26221 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik RIKEN cDNA 1700025G04 gene protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-18 chr4 149399329 149399553 + 1.00793137938329 NA intron (NM_022022, intron 1 of 26) intron (NM_022022, intron 1 of 26) 27190 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-5 chr5 113627554 113627786 + 1.00793137938329 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 15933 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329 chr1 72798880 72799079 + 1.00793137938329 NA Intergenic Intergenic -25501 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-9 chr9 23219507 23219708 + 1.00793137938329 NA Intergenic Intergenic -3469 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-12 chr18 38799586 38799805 + 1.00793137938329 NA Intergenic Intergenic -92761 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329 chr1 120074836 120075151 + 1.00793137938329 NA Intergenic Intergenic -1213 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-5 chr18 10459711 10459914 + 1.00793137938329 NA intron (NM_001083628, intron 4 of 32) intron (NM_001083628, intron 4 of 32) 134633 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding common_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-6 chr8 34529498 34529703 + 1.00793137938329 NA Intergenic RMER17C|LTR|ERVK 110716 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-7 chr15 35021670 35021944 + 1.00793137938329 NA intron (NM_001357821, intron 7 of 11) RMER15|LTR|ERVL 133999 NM_001357821 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-13 chr18 32160116 32160326 + 1.00793137938329 NA Intergenic Intergenic -2868 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-8 chr15 59662435 59662646 + 1.00793137938329 NA Intergenic Intergenic 13886 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-3 chr17 80777552 80777790 + 1.00793137938329 NA Intergenic Intergenic -49646 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-9 chr14 101854153 101854389 + 1.00793137938329 NA intron (NM_001347628, intron 1 of 26) intron (NM_001347628, intron 1 of 26) 13648 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-2 chr10 116944975 116945247 + 1.00793137938329 NA intron (NM_001359645, intron 1 of 10) intron (NM_001359645, intron 1 of 10) 5342 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-12 chr6 34633477 34633684 + 1.00793137938329 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 35076 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-2 chr1 132314559 132314746 + 1.00793137938329 NA Intergenic Intergenic -1473 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-9 chr14 76413982 76414200 + 1.00793137938329 NA promoter-TSS (NM_001310646) promoter-TSS (NM_001310646) -870 NM_001310646 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-19 chr8 119920850 119921099 + 1.00793137938329 NA intron (NM_009462, intron 1 of 13) intron (NM_009462, intron 1 of 13) 10614 NM_001310630 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-15 chr4 57784204 57784424 + 1.00793137938329 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -60934 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-3 chr11 22631841 22632073 + 1.00793137938329 NA Intergenic Intergenic 119674 NM_153596 103765 Mm.221274 NM_153596 ENSMUSG00000049904 Tmem17 AI503894|AW049890 transmembrane protein 17 protein-coding unique_peak1_7_8_-0.432829977651272_2.95351001261668_1.00793137938329 chr12 73518332 73518519 + 1.00793137938329 NA Intergenic Intergenic 27970 NM_178715 238257 Mm.251196 NM_178715 ENSMUSG00000034435 Tmem30b 9130011B11Rik transmembrane protein 30B protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-10 chr5 113889651 113889968 + 1.00793137938329 NA intron (NM_011779, intron 1 of 10) B3|SINE|B2 18897 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-6 chr18 44596990 44597256 + 1.00793137938329 NA intron (NM_001085373, intron 3 of 18) intron (NM_001085373, intron 3 of 18) -64542 NR_026853 626275 Mm.427116 NR_026853 ENSMUSG00000097610 A930012L18Rik - RIKEN cDNA A930012L18 gene ncRNA unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-8 chr8 34052735 34052941 + 1.00793137938329 NA Intergenic Intergenic 54976 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-9 chr4 32338070 32338272 + 1.00793137938329 NA Intergenic Intergenic -79264 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-2 chr17 73391777 73391978 + 1.00793137938329 NA intron (NM_001033444, intron 1 of 22) intron (NM_001033444, intron 1 of 22) 7419 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-10 chr9 14275059 14275320 + 1.00793137938329 NA Intergenic Intergenic -1112 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-13 chr7 109527504 109527720 + 1.00793137938329 NA intron (NM_001001326, intron 15 of 19) intron (NM_001001326, intron 15 of 19) 7480 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-12 chr17 65702597 65702822 + 1.00793137938329 NA intron (NM_133685, intron 3 of 6) intron (NM_133685, intron 3 of 6) -60505 NM_001146002 213272 Mm.255732 NM_153519 ENSMUSG00000050612 Txndc2 AU021712|Sptrx-1|Sptrx1|Trx4 thioredoxin domain containing 2 (spermatozoa) protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-17 chr2 173187085 173187371 + 1.00793137938329 NA Intergenic Intergenic 31694 NM_021394 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-8 chr13 34342255 34342498 + 1.00793137938329 NA intron (NM_001033167, intron 1 of 10) intron (NM_001033167, intron 1 of 10) 2806 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-4 chr7 34629822 34630029 + 1.00793137938329 NA Intergenic Intergenic 23007 NM_146188 233107 Mm.76761 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-5 chr3 108908436 108908642 + 1.00793137938329 NA intron (NM_025845, intron 1 of 5) intron (NM_025845, intron 1 of 5) 3190 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding unique_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-4 chr2 118103529 118103728 + 1.00793137938329 NA intron (NR_126479, intron 1 of 9) intron (NR_126479, intron 1 of 9) 7574 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-19 chr5 115845476 115845684 + 1.00793137938329 NA promoter-TSS (NM_007708) promoter-TSS (NM_007708) -76 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-11 chr5 139254975 139255229 + 1.00793137938329 NA intron (NM_001163316, intron 1 of 8) intron (NM_001163316, intron 1 of 8) 1605 NM_001163316 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-21 chr7 99134006 99134230 + 1.00793137938329 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 7026 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-2 chr10 69537262 69537497 + 1.00793137938329 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 3671 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-6 chr17 27075612 27075835 + 1.00793137938329 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) -15522 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA common_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-4 chr19 18754713 18754962 + 1.00793137938329 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 4854 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-16 chr2 103678003 103678328 + 1.00793137938329 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 83105 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak2_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-3 chr19 6133461 6133710 + 1.00793137938329 NA TTS (NM_019722) TTS (NM_019722) -5370 NM_026912 69024 Mm.329629 NM_026912 ENSMUSG00000024787 Snx15 1500032B08Rik|E130013C21Rik sorting nexin 15 protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-7 chr12 80202654 80202850 + 1.00793137938329 NA intron (NM_134156, intron 3 of 20) intron (NM_134156, intron 3 of 20) 57619 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-2 chr2 167265468 167265669 + 1.00793137938329 NA Intergenic Intergenic -25031 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak1_8_8_-0.264103793623119_3.03787310463075_1.00793137938329 chr1 16218296 16218484 + 1.00793137938329 NA Intergenic Intergenic 112508 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-10 chr15 11750915 11751141 + 1.00793137938329 NA Intergenic Intergenic 154646 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329 chr11 79670515 79670725 + 1.00793137938329 NA intron (NR_045898, intron 2 of 2) intron (NR_045898, intron 2 of 2) 4466 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-14 chr9 63998264 63998492 + 1.00793137938329 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 23681 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-2 chr1 91193629 91193833 + 1.00793137938329 NA intron (NM_001168392, intron 1 of 3) intron (NM_001168392, intron 1 of 3) 13909 NM_001168392 51801 Mm.3272 NM_016894 ENSMUSG00000034353 Ramp1 9130218E19Rik receptor (calcitonin) activity modifying protein 1 protein-coding unique_peak1_9_7_0.0567519225449185_3.02837596127246_1.00793137938329-16 chr2 137406258 137406533 + 1.00793137938329 NA Intergenic Intergenic -289875 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_7_8_-0.432829977651272_2.95351001261668_1.00793137938329-24 chr8 36097148 36097361 + 1.00793137938329 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 2426 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-9 chr6 84384117 84384332 + 1.00793137938329 NA Intergenic Intergenic 39614 NR_046063 100038556 Mm.387783 NR_046063 ENSMUSG00000107797 Gm10445 - predicted gene 10445 ncRNA common_peak2_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-2 chr3 102735027 102735236 + 1.00793137938329 NA promoter-TSS (NM_001243132) promoter-TSS (NM_001243132) -84 NM_001243132 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-7 chr2 3138602 3138821 + 1.00793137938329 NA intron (NM_001347067, intron 1 of 7) intron (NM_001347067, intron 1 of 7) 20026 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding common_peak2_8_8_-0.264103793623119_3.03787310463075_1.00793137938329-4 chr8 34618646 34618872 + 1.00793137938329 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 21557 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak1_9_8_-0.113173078897394_3.11333846199362_1.00793137938329-3 chr16 93909821 93910078 + 1.00793137938329 NA Intergenic Intergenic 19618 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding common_peak1_252_171_0.258668925900177_7.55559921765219_1.00763160650485 chr6 113074754 113077157 + 1.00763160650485 NA intron (NR_027009, intron 1 of 1) intron (NR_027009, intron 1 of 1) 1289 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak2_176_115_0.315200712849317_7.01558135155223_1.00761047797229 chr4 134922878 134924887 + 1.00761047797229 NA 5' UTR (NM_023665, exon 2 of 5) 5' UTR (NM_023665, exon 2 of 5) 257 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding common_peak1_120_126_-0.360373925795841_6.80849772387425_1.00628539497363 chr2 168954584 168955756 + 1.00628539497363 NA 5' UTR (NM_009564, exon 1 of 6) 5' UTR (NM_009564, exon 1 of 6) 417 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding common_peak2_153_99_0.329923282823221_6.80881783118634_1.0062853949736 chr10 80101353 80102613 + 1.0062853949736 NA promoter-TSS (NM_001359635) promoter-TSS (NM_001359635) 719 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_102_109_-0.383772348466433_6.58947353929144_1.006206825038 chr10 127642642 127643935 + 1.006206825038 NA intron (NM_009284, intron 1 of 21) intron (NM_009284, intron 1 of 21) 302 NM_009284 20852 Mm.121721 NM_009284 ENSMUSG00000002147 Stat6 - signal transducer and activator of transcription 6 protein-coding common_peak2_132_84_0.354376588408331_6.58657923034187_1.006206825038 chr3 95818445 95819255 + 1.006206825038 NA 5' UTR (NM_001081293, exon 1 of 11) 5' UTR (NM_001081293, exon 1 of 11) 103 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak1_102_109_-0.383772348466433_6.58947353929144_1.006206825038 chr2 152925177 152926625 + 1.006206825038 NA Intergenic Intergenic 7307 NM_010226 14239 Mm.205798 NM_010226 ENSMUSG00000074676 Foxs1 FREAC10|Fkh3|Fkhl18 forkhead box S1 protein-coding common_peak2_132_84_0.354376588408331_6.58657923034187_1.006206825038-2 chr9 9238146 9239461 + 1.006206825038 NA 5' UTR (NM_027823, exon 1 of 23) 5' UTR (NM_027823, exon 1 of 23) 210 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding common_peak2_130_135_-0.345400532807949_6.91476257484636_1.00609333822631 chr2 148184964 148186645 + 1.00609333822631 NA Intergenic Intergenic -138835 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak1_312_215_0.234905393653003_7.87234019898997_1.0060676320165 chr19 59344071 59346532 + 1.0060676320165 NA exon (NM_001033222, exon 1 of 5) exon (NM_001033222, exon 1 of 5) 479 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak1_264_254_-0.243036441981606_7.87283521586805_1.0060676320165 chr19 47917897 47920048 + 1.0060676320165 NA intron (NM_001001738, intron 1 of 1) CpG 327 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding common_peak2_93_101_-0.405819018242685_6.46951583285015_1.00585340319754-2 chr5 77384483 77385741 + 1.00585340319754 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 22933 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_93_101_-0.405819018242685_6.46951583285015_1.00585340319754 chr10 17725127 17726625 + 1.00585340319754 NA TTS (NM_010828) TTS (NM_010828) 2648 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_151_154_-0.321070909875579_7.11558895033645_1.00539549395807 chr18 75386572 75388390 + 1.00539549395807 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 20116 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_62_72_-0.496454260633183_5.94159742856343_1.00457410994137 chr11 86645891 86646523 + 1.00457410994137 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 25068 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_62_72_-0.496454260633183_5.94159742856343_1.00457410994137-2 chr4 148037869 148038863 + 1.00457410994137 NA promoter-TSS (NM_010840) promoter-TSS (NM_010840) 447 NM_011929 26372 Mm.89987 NM_011929 ENSMUSG00000029016 Clcn6 AI850629|Clc6 chloride channel, voltage-sensitive 6 protein-coding common_peak2_62_72_-0.496454260633183_5.94159742856343_1.00457410994137 chr11 106487067 106487816 + 1.00457410994137 NA intron (NM_023913, intron 1 of 21) CpG 355 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak2_87_52_0.444199968460617_5.95002043879351_1.00457410994136 chr13 115102075 115103101 + 1.00457410994136 NA promoter-TSS (NM_001033228) promoter-TSS (NM_001033228) -624 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak1_87_52_0.444199968460617_5.95002043879351_1.00457410994136-3 chr19 41669944 41670501 + 1.00457410994136 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 73634 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak1_87_52_0.444199968460617_5.95002043879351_1.00457410994136-2 chr14 31205281 31205953 + 1.00457410994136 NA intron (NM_001347583, intron 1 of 13) intron (NM_001347583, intron 1 of 13) 1209 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding common_peak1_87_52_0.444199968460617_5.95002043879351_1.00457410994136 chr10 128695506 128696231 + 1.00457410994136 NA intron (NM_177411, intron 1 of 5) intron (NM_177411, intron 1 of 5) 400 NM_177411 19344 Mm.12815 NM_011229 ENSMUSG00000000711 Rab5b C030027M18Rik RAB5B, member RAS oncogene family protein-coding common_peak2_77_86_-0.443624698739404_6.22113114647903_1.00422562882459 chr1 179042307 179043143 + 1.00422562882459 NA intron (NM_027188, intron 10 of 11) intron (NM_027188, intron 10 of 11) 475316 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak2_77_86_-0.443624698739404_6.22113114647903_1.00422562882459-3 chr9 72662509 72663547 + 1.00422562882459 NA intron (NM_010890, intron 1 of 28) CpG 697 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_104_64_0.40276880217156_6.22375221411423_1.00422562882459-2 chr6 146910101 146910798 + 1.00422562882459 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 21955 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_104_64_0.40276880217156_6.22375221411423_1.00422562882459 chr4 149953837 149954877 + 1.00422562882459 NA intron (NM_029035, intron 1 of 2) CpG 649 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak2_77_86_-0.443624698739404_6.22113114647903_1.00422562882459-2 chr11 101783946 101785251 + 1.00422562882459 NA 5' UTR (NM_001316366, exon 2 of 13) 5' UTR (NM_001316366, exon 2 of 13) 712 NM_008815 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding common_peak1_254_172_0.261585171534572_7.56542081340401_1.00389215209377 chr14 121035257 121037266 + 1.00389215209377 NA intron (NM_134082, intron 1 of 26) CpG 687 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak1_95_58_0.414122637936921_6.0897043683303_1.00278553979691 chr11 4302302 4303123 + 1.00278553979691 NA Intergenic Intergenic 35916 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_96_58_0.428967505049236_6.09712680188646_1.00278553979691 chr1 93634813 93635601 + 1.00278553979691 NA intron (NM_021537, intron 2 of 11) CpG 520 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding common_peak2_70_79_-0.457307353180632_6.09327441829705_1.00278553979691 chr5 137072199 137073185 + 1.00278553979691 NA promoter-TSS (NM_008871) promoter-TSS (NM_008871) -420 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_70_79_-0.457307353180632_6.09327441829705_1.00278553979691-2 chr8 109750206 109751376 + 1.00278553979691 NA Intergenic Intergenic -13052 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding common_peak1_96_58_0.428967505049236_6.09712680188646_1.00278553979691 chr4 99120056 99121161 + 1.00278553979691 NA intron (NM_026082, intron 1 of 47) CpG 307 NM_001290636 67299 Mm.260623 NM_026082 ENSMUSG00000028556 Dock7 3110056M06Rik|Gm430 dedicator of cytokinesis 7 protein-coding common_peak1_95_58_0.414122637936921_6.0897043683303_1.00278553979691-2 chr11 59471596 59472553 + 1.00278553979691 NA intron (NM_178417, intron 1 of 3) intron (NM_178417, intron 1 of 3) 400 NM_178417 237775 Mm.339604 NM_178417 ENSMUSG00000054519 Zfp867 - zinc finger protein 867 protein-coding common_peak2_95_58_0.414122637936921_6.0897043683303_1.00278553979691 chr2 36136129 36136758 + 1.00278553979691 NA promoter-TSS (NM_026422) promoter-TSS (NM_026422) 45 NM_026422 67871 Mm.378232 NM_026422 ENSMUSG00000026887 Mrrf 2400002D02Rik|MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding common_peak2_96_58_0.428967505049236_6.09712680188646_1.00278553979691-2 chr10 116956791 116957743 + 1.00278553979691 NA intron (NR_038026, intron 2 of 2) MT2B|LTR|ERVL 6705 NR_038026 71086 Mm.214134 NR_038025 ENSMUSG00000112627 4933412E12Rik - RIKEN cDNA 4933412E12 gene ncRNA common_peak1_177_116_0.310887527243279_7.02580848320504_1.00217352306558 chr15 53130811 53132313 + 1.00217352306558 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 214621 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_141_145_-0.33225879674653_7.02369516050675_1.00217352306558 chr8 64692106 64693038 + 1.00217352306558 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 537 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_177_116_0.310887527243279_7.02580848320504_1.00217352306558-2 chr8 31167665 31168675 + 1.00217352306558 NA intron (NM_026453, intron 1 of 9) intron (NM_026453, intron 1 of 9) 554 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding common_peak2_112_118_-0.364495061647692_6.7125702324841_1.00183416889097 chr15 11836160 11836972 + 1.00183416889097 NA Intergenic Intergenic 69108 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_111_118_-0.377228628662508_6.70620344897669_1.00183416889097 chr6 91212881 91214634 + 1.00183416889097 NA intron (NM_007992, intron 1 of 17) intron (NM_007992, intron 1 of 17) 993 NM_007992 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_112_118_-0.364495061647692_6.7125702324841_1.00183416889097 chr1 45501393 45502982 + 1.00183416889097 NA intron (NM_007737, intron 1 of 53) intron (NM_007737, intron 1 of 53) 1095 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak1_111_118_-0.377228628662508_6.70620344897669_1.00183416889097 chr6 84009580 84010540 + 1.00183416889097 NA intron (NM_001077694, intron 1 of 54) intron (NM_001077694, intron 1 of 54) 1462 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak2_58_32_0.555006965964226_5.32189760234057_1.00060938969219-2 chr19 5743124 5743381 + 1.00060938969219 NA intron (NM_008520, intron 2 of 27) intron (NM_008520, intron 2 of 27) 2348 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219-6 chr8 68793988 68794490 + 1.00060938969219 NA intron (NM_001359129, intron 1 of 18) CpG 310 NM_001293792 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 protein-coding common_peak1_57_32_0.530518902018813_5.30965357036786_1.00060938969219 chr18 66331726 66332183 + 1.00060938969219 NA Intergenic Intergenic -40116 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219-5 chr3 95754382 95754862 + 1.00060938969219 NA intron (NM_001356965, intron 1 of 17) intron (NM_001356965, intron 1 of 17) 355 NR_151589 71807 Mm.271754 NM_027931 ENSMUSG00000028107 Tars2 2610024N01Rik|AI429208|Tarsl1|thrRS threonyl-tRNA synthetase 2, mitochondrial (putative) protein-coding unique_peak2_38_48_-0.608336067432639_5.31054181039889_1.00060938969219 chr19 55701200 55702156 + 1.00060938969219 NA intron (NR_045318, intron 1 of 3) MER58A|DNA|hAT-Charlie 526 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219 chr1 155145865 155146847 + 1.00060938969219 NA intron (NM_008209, intron 1 of 5) intron (NM_008209, intron 1 of 5) 458 NM_001355063 15064 Mm.7580 NM_008209 ENSMUSG00000026471 Mr1 H2ls major histocompatibility complex, class I-related protein-coding common_peak1_38_48_-0.608336067432639_5.31054181039889_1.00060938969219 chr2 60382836 60383202 + 1.00060938969219 NA intron (NM_013825, intron 1 of 34) intron (NM_013825, intron 1 of 34) 212 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding common_peak2_57_32_0.530518902018813_5.30965357036786_1.00060938969219-2 chr2 94157387 94157843 + 1.00060938969219 NA intron (NM_019657, intron 1 of 10) CpG 294 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak2_38_48_-0.608336067432639_5.31054181039889_1.00060938969219-2 chr13 60659943 60660685 + 1.00060938969219 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 58103 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding common_peak2_38_48_-0.608336067432639_5.31054181039889_1.00060938969219 chr11 3289834 3290389 + 1.00060938969219 NA promoter-TSS (NM_001253691) promoter-TSS (NM_001253691) -346 NM_001253690 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding common_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219-3 chr16 20716837 20717536 + 1.00060938969219 NA promoter-TSS (NM_145632) promoter-TSS (NM_145632) -550 NM_009900 12724 Mm.177761 NM_009900 ENSMUSG00000022843 Clcn2 AL118368|ClC-2|Clc2|nmf240 chloride channel, voltage-sensitive 2 protein-coding common_peak2_58_32_0.555006965964226_5.32189760234057_1.00060938969219 chr15 84412824 84413230 + 1.00060938969219 NA intron (NM_001163145, intron 3 of 4) intron (NM_001163145, intron 3 of 4) 33583 NM_001347543 72301 Mm.275387 NM_001163145 ENSMUSG00000062760 1810041L15Rik Kiaa1644|Shisal1 RIKEN cDNA 1810041L15 gene protein-coding common_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219-2 chr13 40723271 40723890 + 1.00060938969219 NA intron (NM_001122948, intron 3 of 6) intron (NM_001122948, intron 3 of 6) -4228 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA common_peak2_57_32_0.530518902018813_5.30965357036786_1.00060938969219 chr11 4703882 4704335 + 1.00060938969219 NA promoter-TSS (NM_001356391) promoter-TSS (NM_001356391) 236 NM_197979 66152 Mm.269736 NM_197979 ENSMUSG00000059534 Uqcr10 1110020P15Rik|AA960494|Ucrc ubiquinol-cytochrome c reductase, complex III subunit X protein-coding common_peak1_57_32_0.530518902018813_5.30965357036786_1.00060938969219-2 chr19 29641503 29641905 + 1.00060938969219 NA intron (NM_001362131, intron 2 of 14) intron (NM_001362131, intron 2 of 14) 6711 NM_001081213 226090 Mm.267131 NM_001081213 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|b2b2633Clo|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak1_57_32_0.530518902018813_5.30965357036786_1.00060938969219-3 chr5 114648307 114648763 + 1.00060938969219 NA intron (NM_022017, intron 1 of 15) L2b|LINE|L2 9886 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak2_57_32_0.530518902018813_5.30965357036786_1.00060938969219-3 chr4 136020946 136021617 + 1.00060938969219 NA intron (NM_013736, intron 1 of 10) CpG 368 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding common_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219-4 chr17 24550060 24550362 + 1.00060938969219 NA 5' UTR (NM_013630, exon 1 of 46) 5' UTR (NM_013630, exon 1 of 46) 261 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystin 1, transient receptor poteintial channel interacting protein-coding common_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219 chr1 119836572 119837354 + 1.00060938969219 NA 5' UTR (NM_019933, exon 1 of 27) 5' UTR (NM_019933, exon 1 of 27) 108 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding common_peak2_38_48_-0.608336067432639_5.31054181039889_1.00060938969219-3 chr2 31448972 31449792 + 1.00060938969219 NA Intergenic Intergenic -20888 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak2_58_32_0.555006965964226_5.32189760234057_1.00060938969219-3 chr4 137448624 137449133 + 1.00060938969219 NA Intergenic Intergenic -4418 NM_027063 69380 Mm.272519 NM_027063 ENSMUSG00000041399 1700013G24Rik AI507018 RIKEN cDNA 1700013G24 gene protein-coding unique_peak1_58_32_0.555006965964226_5.32189760234057_1.00060938969219-2 chr8 75084497 75085418 + 1.00060938969219 NA Intergenic Intergenic -8661 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak2_58_32_0.555006965964226_5.32189760234057_1.00060938969219-4 chr7 70359910 70360523 + 1.00060938969219 NA exon (NM_009697, exon 1 of 3) exon (NM_009697, exon 1 of 3) 377 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak2_39_20_0.650324540619669_4.7174796930886_1.00055860626307-2 chr10 123196641 123196924 + 1.00055860626307 NA intron (NM_001301628, intron 1 of 20) CpG 237 NM_027604 14479 Mm.244209 NM_027604 ENSMUSG00000020124 Usp15 4921514G19Rik|AI327321|E430033I05Rik|Gcap18 ubiquitin specific peptidase 15 protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-2 chr12 112829816 112830160 + 1.00055860626307 NA promoter-TSS (NM_001359292) promoter-TSS (NM_001359292) -467 NM_001359234 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-2 chr12 99260599 99260983 + 1.00055860626307 NA intron (NM_183186, intron 4 of 5) intron (NM_183186, intron 4 of 5) -97983 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-8 chr3 41287137 41287756 + 1.00055860626307 NA Intergenic Intergenic -204400 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-3 chr16 33580295 33580709 + 1.00055860626307 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 61907 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding unique_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-4 chr19 34583098 34583385 + 1.00055860626307 NA promoter-TSS (NM_010501) promoter-TSS (NM_010501) -288 NM_010501 15959 Mm.426079 NM_010501 ENSMUSG00000074896 Ifit3 Ifi49|P49 interferon-induced protein with tetratricopeptide repeats 3 protein-coding unique_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-2 chr6 127375841 127376648 + 1.00055860626307 NA Intergenic Intergenic -68277 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-4 chr16 34925257 34925826 + 1.00055860626307 NA intron (NM_139300, intron 16 of 31) intron (NM_139300, intron 16 of 31) 13788 NR_040536 76649 Mm.420532 NR_040536 ENSMUSG00000100593 1700119H24Rik - RIKEN cDNA 1700119H24 gene ncRNA common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307 chr1 179055111 179055702 + 1.00055860626307 NA intron (NM_027188, intron 8 of 11) intron (NM_027188, intron 8 of 11) 462635 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-6 chr2 33430849 33431216 + 1.00055860626307 NA intron (NM_001085507, intron 1 of 2) CpG 292 NM_001085507 241311 Mm.296512 NM_001085507 ENSMUSG00000068966 Zbtb34 Gm349|mKIAA1993 zinc finger and BTB domain containing 34 protein-coding common_peak2_39_20_0.650324540619669_4.7174796930886_1.00055860626307-3 chr19 59590409 59590895 + 1.00055860626307 NA Intergenic Intergenic 97516 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA unique_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307 chr19 10946287 10946785 + 1.00055860626307 NA intron (NM_023731, intron 1 of 3) intron (NM_023731, intron 1 of 3) 2730 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak2_39_20_0.650324540619669_4.7174796930886_1.00055860626307-4 chr2 25332828 25333276 + 1.00055860626307 NA promoter-TSS (NR_027448) promoter-TSS (NR_027448) 309 NM_001029983 227619 Mm.270798 NM_001029983 ENSMUSG00000036646 Man1b1 E430019H13Rik|ERMan1|Gm108|MANA-ER mannosidase, alpha, class 1B, member 1 protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-4 chr15 101174166 101174568 + 1.00055860626307 NA intron (NM_007395, intron 1 of 8) CpG 295 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ALK-4|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-7 chr2 157422299 157422686 + 1.00055860626307 NA Intergenic Intergenic -1801 NM_009271 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307 chr11 113073591 113074419 + 1.00055860626307 NA intron (NR_015556, intron 1 of 2) B3|SINE|B2 127833 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-5 chr2 163472204 163472604 + 1.00055860626307 NA promoter-TSS (NR_028122) promoter-TSS (NR_028122) -141 NR_028122 69517 Mm.395343 NR_028122 ENSMUSG00000053353 2310001K24Rik - RIKEN cDNA 2310001K24 gene ncRNA common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-10 chr7 139782862 139783676 + 1.00055860626307 NA Intergenic Intergenic 4251 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA common_peak2_39_20_0.650324540619669_4.7174796930886_1.00055860626307 chr1 75478863 75479244 + 1.00055860626307 NA promoter-TSS (NM_177056) promoter-TSS (NM_177056) 418 NM_001001566 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding unique_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-5 chr7 24593628 24594317 + 1.00055860626307 NA exon (NM_023154, exon 2 of 8) exon (NM_023154, exon 2 of 8) -6331 NM_001033205 101544 Mm.20117 NM_001033205 ENSMUSG00000066721 Zfp575 AI326876|Znf575 zinc finger protein 575 protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-3 chr14 66822403 66823082 + 1.00055860626307 NA intron (NM_009955, intron 8 of 13) intron (NM_009955, intron 8 of 13) 45858 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-11 chr8 83973036 83973497 + 1.00055860626307 NA intron (NM_008854, intron 1 of 9) intron (NM_008854, intron 1 of 9) 288 NM_008854 18747 Mm.19111 NM_008854 ENSMUSG00000005469 Prkaca PKCD|Pkaca protein kinase, cAMP dependent, catalytic, alpha protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-9 chr4 141720852 141721264 + 1.00055860626307 NA intron (NM_001017966, intron 1 of 9) intron (NM_001017966, intron 1 of 9) 2361 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307 chr12 84175092 84175715 + 1.00055860626307 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 18612 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-6 chr8 33384865 33385342 + 1.00055860626307 NA intron (NM_001122822, intron 1 of 33) intron (NM_001122822, intron 1 of 33) 424 NM_001122822 22427 Mm.228805 NM_011721 ENSMUSG00000031583 Wrn AI846146 Werner syndrome RecQ like helicase protein-coding unique_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-3 chr18 6944458 6945298 + 1.00055860626307 NA intron (NM_177595, intron 5 of 6) intron (NM_177595, intron 5 of 6) 59901 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding unique_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-2 chr11 116142059 116142589 + 1.00055860626307 NA TTS (NM_172571) TTS (NM_172571) -3456 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding unique_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-3 chr8 70439053 70439534 + 1.00055860626307 NA intron (NM_001004062, intron 1 of 13) intron (NM_001004062, intron 1 of 13) 280 NM_001004062 382056 Mm.227767 NM_001004062 ENSMUSG00000003575 Crtc1 AI413414|Mect1|R74955|TORC1|mKIAA0616 CREB regulated transcription coactivator 1 protein-coding common_peak1_39_20_0.650324540619669_4.7174796930886_1.00055860626307-5 chr17 35699521 35700003 + 1.00055860626307 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 828 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak2_23_33_-0.77658719480509_4.69916924384779_1.00055860626307-2 chr15 79324736 79325244 + 1.00055860626307 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 3381 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak2_39_20_0.650324540619669_4.7174796930886_1.00055860626307-5 chr7 109166477 109166780 + 1.00055860626307 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 3884 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding common_peak1_23_33_-0.77658719480509_4.69916924384779_1.00055860626307 chr1 162453185 162453534 + 1.00055860626307 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 24675 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak1_166_108_0.321688047249618_6.92902834840173_1.00028844196551 chr1 57405982 57407402 + 1.00028844196551 NA promoter-TSS (NM_001302963) promoter-TSS (NM_001302963) -18 NM_001302963 68736 Mm.288490 NM_001037742 ENSMUSG00000048495 Tyw5 1110034B05Rik tRNA-yW synthesizing protein 5 protein-coding common_peak1_166_108_0.321688047249618_6.92902834840173_1.00028844196551-2 chr3 90611328 90613036 + 1.00028844196551 NA promoter-TSS (NM_011313) promoter-TSS (NM_011313) -712 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_166_108_0.321688047249618_6.92902834840173_1.00028844196551-3 chr8 26158176 26159257 + 1.00028844196551 NA intron (NM_199042, intron 1 of 2) CpG 547 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_155_100_0.334052334784285_6.82523765014394_1.0000419899553-2 chr6 91473761 91476244 + 1.0000419899553 NA intron (NM_028766, intron 1 of 11) MIR|SINE|MIR 1251 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak1_155_100_0.334052334784285_6.82523765014394_1.0000419899553 chr15 28132562 28133956 + 1.0000419899553 NA Intergenic Intergenic -70507 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak1_154_100_0.324839975981622_6.82063147074261_1.0000419899553 chr4 132883702 132885167 + 1.0000419899553 NA promoter-TSS (NM_133887) promoter-TSS (NM_133887) 24 NM_133887 100226 Mm.28237 NM_133887 ENSMUSG00000028879 Stx12 AI850350|AU041521|Stx13 syntaxin 12 protein-coding common_peak2_114_71_0.385530219534576_6.3626901112096_0.999489482352404 chr13 5836257 5837306 + 0.999489482352404 NA Intergenic Intergenic 21311 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_86_94_-0.414106984726227_6.36280211596783_0.999489482352379 chr11 121353637 121354776 + 0.999489482352379 NA intron (NM_025793, intron 1 of 9) CpG 241 NM_025793 66840 Mm.103986 NM_025793 ENSMUSG00000025173 Wdr45b 0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l WD repeat domain 45B protein-coding common_peak1_86_94_-0.414106984726227_6.36280211596783_0.999489482352379-2 chr18 64887295 64888756 + 0.999489482352379 NA 5' UTR (NM_001114386, exon 1 of 31) 5' UTR (NM_001114386, exon 1 of 31) 269 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_103_110_-0.382987651041482_6.60292204082937_0.99893398756889 chr19 53390871 53391488 + 0.99893398756889 NA promoter-TSS (NM_172429) promoter-TSS (NM_172429) -545 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_679_610_-0.153760732021377_9.17814820380804_0.998509148079135 chr19 5846838 5850752 + 0.998509148079135 NA Intergenic Intergenic -3315 NR_003513 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_79_47_0.45062448310403_5.81027474227317_0.998054460809465 chr3 79978059 79978539 + 0.998054460809465 NA Intergenic Intergenic 92369 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_79_47_0.45062448310403_5.81027474227317_0.998054460809465-2 chr7 45015545 45016112 + 0.998054460809465 NA intron (NM_001008422, intron 1 of 10) CpG 421 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak2_56_66_-0.516090133685171_5.80804412361519_0.998054460809465 chr10 24571348 24572172 + 0.998054460809465 NA Intergenic Intergenic -23682 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_80_47_0.468419952406458_5.81917247692438_0.998054460809465 chrUn_JH584304 32354 32554 + 0.998054460809465 NA Intergenic Intergenic 27235 NR_003518 66776 Mm.247625 NR_003518 Pisd-ps3 4933439C20Rik phosphatidylserine decarboxylase, pseudogene 3 pseudo common_peak2_56_66_-0.516090133685171_5.80804412361519_0.998054460809465-2 chr7 16286345 16287002 + 0.998054460809465 NA intron (NM_001136471, intron 1 of 13) CpG 122 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak1_94_102_-0.404735153457437_6.4841329504545_0.997974826158522 chr19 43673692 43674858 + 0.997974826158522 NA promoter-TSS (NR_045645) promoter-TSS (NR_045645) 606 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_178_117_0.306634522974666_7.03596031084918_0.996819771313367 chr17 3596672 3598936 + 0.996819771313367 NA Intergenic Intergenic 39980 NR_045302 68230 Mm.431352 NR_045302 1700102H20Rik - RIKEN cDNA 1700102H20 gene ncRNA common_peak1_145_93_0.342771604315045_6.72597465383516_0.99518918075986 chr10 80931448 80933289 + 0.99518918075986 NA TTS (NM_008655) TTS (NM_008655) 2277 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_78_87_-0.441863952362021_6.23849964245629_0.994907128589099 chr10 24588811 24589361 + 0.994907128589099 NA Intergenic Intergenic -6356 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_105_65_0.394320956338163_6.24155459752753_0.994907128589099 chr8 13667766 13668360 + 0.994907128589099 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 9524 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_65_37_0.512083491380929_5.50396925913405_0.994719720785879-4 chr16 13386620 13387481 + 0.994719720785879 NA intron (NM_153588, intron 6 of 14) intron (NM_153588, intron 6 of 14) 28629 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_65_37_0.512083491380929_5.50396925913405_0.994719720785879-3 chr15 6385925 6386988 + 0.994719720785879 NA promoter-TSS (NM_023118) promoter-TSS (NM_023118) -292 NM_023118 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak1_65_37_0.512083491380929_5.50396925913405_0.994719720785879 chr10 86021946 86022651 + 0.994719720785879 NA exon (NM_001310745, exon 1 of 9) exon (NM_001310745, exon 1 of 9) 144 NM_001347151 69754 Mm.44236 NM_153195 ENSMUSG00000001786 Fbxo7 2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118 F-box protein 7 protein-coding common_peak1_65_37_0.512083491380929_5.50396925913405_0.994719720785879-5 chr6 120836163 120836770 + 0.994719720785879 NA intron (NM_153516, intron 1 of 6) CpG 236 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_65_37_0.512083491380929_5.50396925913405_0.994719720785879-2 chr11 72848594 72849367 + 0.994719720785879 NA intron (NM_001045536, intron 12 of 54) intron (NM_001045536, intron 12 of 54) 52754 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding unique_peak2_44_54_-0.569991566098076_5.49636393047562_0.994719720785867 chr11 103028506 103029048 + 0.994719720785867 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 234 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak2_44_54_-0.569991566098076_5.49636393047562_0.994719720785867 chr13 85189398 85189994 + 0.994719720785867 NA intron (NM_023243, intron 1 of 8) intron (NM_023243, intron 1 of 8) 311 NM_023243 66671 Mm.18474 NM_023243 ENSMUSG00000021548 Ccnh 6330408H09Rik|AI661354|AV102684|AW538719 cyclin H protein-coding common_peak2_50_60_-0.54007087799898_5.6607018985634_0.994417253404935-2 chr11 117963713 117964509 + 0.994417253404935 NA Intergenic Intergenic 5255 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_50_60_-0.54007087799898_5.6607018985634_0.994417253404935-6 chr7 144940223 144941363 + 0.994417253404935 NA promoter-TSS (NM_007631) promoter-TSS (NM_007631) -868 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak1_50_60_-0.54007087799898_5.6607018985634_0.994417253404935 chr5 103377156 103377819 + 0.994417253404935 NA Intergenic Intergenic 30889 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak2_50_60_-0.54007087799898_5.6607018985634_0.994417253404935-3 chr5 31219838 31220569 + 0.994417253404935 NA intron (NM_008014, intron 1 of 9) CpG 342 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak2_72_42_0.478150680863829_5.66534009513401_0.994417253404935 chr11 16804377 16804759 + 0.994417253404935 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 52365 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_72_42_0.478150680863829_5.66534009513401_0.994417253404935 chr1 62704614 62705693 + 0.994417253404935 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 1836 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_72_42_0.478150680863829_5.66534009513401_0.994417253404935-2 chr16 18416510 18417144 + 0.994417253404935 NA intron (NM_007744, intron 1 of 4) intron (NM_007744, intron 1 of 4) -3333 NM_001111063 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding common_peak2_50_60_-0.54007087799898_5.6607018985634_0.994417253404935-5 chr7 19748480 19749463 + 0.994417253404935 NA intron (NM_008990, intron 1 of 8) intron (NM_008990, intron 1 of 8) 602 NM_008990 19294 Mm.4341 NM_008990 ENSMUSG00000062300 Nectin2 AI325026|AI987993|Cd112|MPH|Pvr|Pvrl2|Pvs|nectin-2 nectin cell adhesion molecule 2 protein-coding common_peak2_50_60_-0.54007087799898_5.6607018985634_0.994417253404935 chr11 106272090 106272907 + 0.994417253404935 NA exon (NM_001130187, exon 1 of 13) exon (NM_001130187, exon 1 of 13) 474 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak2_50_60_-0.54007087799898_5.6607018985634_0.994417253404935-4 chr7 16309635 16310388 + 0.994417253404935 NA intron (NM_133234, intron 1 of 3) CpG 428 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak2_33_43_-0.649600761300846_5.13463123798687_0.994385396256659-2 chrX 12857974 12858427 + 0.994385396256659 NA Intergenic Intergenic -78673 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding common_peak1_33_43_-0.649600761300846_5.13463123798687_0.994385396256659-2 chr3 36863171 36863797 + 0.994385396256659 NA intron (NM_172679, intron 1 of 85) CpG 378 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak1_33_43_-0.649600761300846_5.13463123798687_0.994385396256659 chr2 130664241 130664587 + 0.994385396256659 NA intron (NM_029832, intron 1 of 8) CpG 231 NM_029832 77006 Mm.440063 NM_029832 ENSMUSG00000068290 Ddrgk1 1110001I20Rik|2600009E05Rik|AI326138|Ufbp1 DDRGK domain containing 1 protein-coding common_peak2_33_43_-0.649600761300846_5.13463123798687_0.994385396256659 chr13 41707403 41708104 + 0.994385396256659 NA Intergenic Intergenic 101537 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_51_28_0.560502199754297_5.13823209500472_0.994385396256653-3 chr4 132308676 132309099 + 0.994385396256653 NA promoter-TSS (NR_029412) promoter-TSS (NR_029412) 209 NR_029468 100039864 Mm.258912 NR_029468 ENSMUSG00000086290 Snhg12 2310005L22Rik small nucleolar RNA host gene 12 ncRNA common_peak1_51_28_0.560502199754297_5.13823209500472_0.994385396256653-2 chr11 84828479 84828991 + 0.994385396256653 NA promoter-TSS (NR_046281) promoter-TSS (NR_046281) 268 NM_177564 192970 Mm.192213 NM_177564 ENSMUSG00000034449 Dhrs11 - dehydrogenase/reductase (SDR family) member 11 protein-coding unique_peak1_51_28_0.560502199754297_5.13823209500472_0.994385396256653-2 chr9 110475965 110476635 + 0.994385396256653 NA promoter-TSS (NM_010628) promoter-TSS (NM_010628) 394 NM_001360306 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding common_peak1_51_28_0.560502199754297_5.13823209500472_0.994385396256653 chr1 21002683 21003204 + 0.994385396256653 NA intron (NM_177409, intron 10 of 10) intron (NM_177409, intron 10 of 10) 51317 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_51_28_0.560502199754297_5.13823209500472_0.994385396256653-4 chrX 94797445 94798222 + 0.994385396256653 NA non-coding (NR_003292, exon 1 of 1) non-coding (NR_003292, exon 1 of 1) 456 NR_003292 668171 Mm.426134 NR_003292 Zxda 4933406P09Rik|AW413531 zinc finger, X-linked, duplicated A pseudo common_peak2_51_28_0.560502199754297_5.13823209500472_0.994385396256653 chr15 27326454 27327201 + 0.994385396256653 NA Intergenic Intergenic -139850 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_51_28_0.560502199754297_5.13823209500472_0.994385396256653-4 chr8 94269876 94270359 + 0.994385396256653 NA intron (NM_001357268, intron 1 of 20) intron (NM_001357268, intron 1 of 20) 1511 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak1_51_28_0.560502199754297_5.13823209500472_0.994385396256653 chr11 118216379 118217331 + 0.994385396256653 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -4113 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_51_28_0.560502199754297_5.13823209500472_0.994385396256653-2 chr2 102945235 102945807 + 0.994385396256653 NA Intergenic Intergenic -43856 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_51_28_0.560502199754297_5.13823209500472_0.994385396256653-3 chr8 124332008 124332432 + 0.994385396256653 NA intron (NM_139272, intron 9 of 15) intron (NM_139272, intron 9 of 15) 100826 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_123_128_-0.347832695443716_6.8373109077014_0.993908413855351-2 chr9 48494676 48495933 + 0.993908413855351 NA promoter-TSS (NM_001326356) promoter-TSS (NM_001326356) 26 NM_001326355 67010 Mm.76911 NM_144948 ENSMUSG00000042396 Rbm7 1200007M24Rik|1500011D06Rik|AU041934|AW554393 RNA binding motif protein 7 protein-coding common_peak2_123_128_-0.347832695443716_6.8373109077014_0.993908413855351 chr7 45717607 45719315 + 0.993908413855351 NA promoter-TSS (NM_203280) promoter-TSS (NM_203280) 390 NM_009077 19899 Mm.3459 NM_009077 ENSMUSG00000059070 Rpl18 L18|Rpl18a ribosomal protein L18 protein-coding common_peak2_45_24_0.59899711202153_4.94335474578549_0.993451450456409-2 chr14 99324236 99324581 + 0.993451450456409 NA Intergenic Intergenic 25717 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_45_24_0.59899711202153_4.94335474578549_0.993451450456409 chr16 35768801 35769320 + 0.993451450456409 NA exon (NM_153550, exon 1 of 9) exon (NM_153550, exon 1 of 9) 296 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding common_peak2_45_24_0.59899711202153_4.94335474578549_0.993451450456409-3 chr6 83109156 83109541 + 0.993451450456409 NA TTS (NM_001081266) TTS (NM_001081266) 240 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding common_peak2_45_24_0.59899711202153_4.94335474578549_0.993451450456409-4 chr9 51057018 51057472 + 0.993451450456409 NA 3' UTR (NM_001033534, exon 8 of 8) 3' UTR (NM_001033534, exon 8 of 8) 19849 NM_001033534 244864 Mm.335152 NM_001033534 ENSMUSG00000060594 Layn E030012M19Rik|Gm511 layilin protein-coding common_peak1_45_24_0.59899711202153_4.94335474578549_0.993451450456409-2 chr19 9947368 9948163 + 0.993451450456409 NA Intergenic ID_B1|SINE|B4 -32835 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_45_24_0.59899711202153_4.94335474578549_0.993451450456409 chr1 71880108 71880536 + 0.993451450456409 NA Intergenic Intergenic -7790 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_45_24_0.59899711202153_4.94335474578549_0.993451450456409-3 chr5 142961318 142961847 + 0.993451450456409 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 1227 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding unique_peak1_45_24_0.59899711202153_4.94335474578549_0.993451450456409-2 chr13 97928282 97928886 + 0.993451450456409 NA intron (NM_012026, intron 35 of 35) intron (NM_012026, intron 35 of 35) 177472 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA unique_peak1_45_24_0.59899711202153_4.94335474578549_0.993451450456409 chr1 180904344 180904819 + 0.993451450456409 NA intron (NM_133705, intron 1 of 6) (TGAG)n|Simple_repeat|Simple_repeat 307 NM_133705 69051 Mm.274180 NM_133705 ENSMUSG00000026520 Pycr2 1810018M05Rik|P5cr2 pyrroline-5-carboxylate reductase family, member 2 protein-coding common_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403 chr12 75669860 75670314 + 0.993451450456403 NA promoter-TSS (NM_028203) promoter-TSS (NM_028203) -550 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak1_28_38_-0.703434217911738_4.93368510990638_0.993451450456403 chr6 81965105 81965788 + 0.993451450456403 NA intron (NM_026490, intron 1 of 4) intron (NM_026490, intron 1 of 4) 503 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding common_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403-4 chr5 151054811 151055479 + 0.993451450456403 NA intron (NR_153382, intron 7 of 13) intron (NR_153382, intron 7 of 13) 102538 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403-2 chr2 60658994 60659688 + 0.993451450456403 NA intron (NM_021359, intron 4 of 14) intron (NM_021359, intron 4 of 14) 14352 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403-3 chr4 124802629 124803388 + 0.993451450456403 NA intron (NM_008636, intron 1 of 10) intron (NM_008636, intron 1 of 10) 459 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding common_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403-5 chr8 36664706 36665266 + 0.993451450456403 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -51043 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403 chr12 77969094 77969585 + 0.993451450456403 NA Intergenic Intergenic -257316 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_28_38_-0.703434217911738_4.93368510990638_0.993451450456403-2 chr14 27508017 27508810 + 0.993451450456403 NA promoter-TSS (NM_177111) promoter-TSS (NM_177111) 47 NM_177111 320234 Mm.247767 NM_177111 ENSMUSG00000046753 Ccdc66 E230015L20Rik coiled-coil domain containing 66 protein-coding common_peak2_64_73_-0.471313271993202_5.97379672963235_0.99331064214776 chr11 74831046 74831877 + 0.99331064214776 NA intron (NM_010813, intron 1 of 5) CpG-2219 537 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_88_53_0.433419724236459_5.9715973642817_0.99331064214776 chr12 111442734 111444134 + 0.99331064214776 NA intron (NM_009396, intron 1 of 11) intron (NM_009396, intron 1 of 11) 773 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_64_73_-0.471313271993202_5.97379672963235_0.99331064214776 chr5 137115489 137116499 + 0.99331064214776 NA intron (NM_201373, intron 1 of 2) C-rich|Low_complexity|Low_complexity 213 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_64_73_-0.471313271993202_5.97379672963235_0.99331064214776-2 chr13 69534876 69535685 + 0.99331064214776 NA Intergenic Intergenic -1416 NM_001169131 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak1_330_312_-0.220126506283664_8.17995559379079_0.992721212056894 chr15 77969683 77971623 + 0.992721212056894 NA intron (NM_018749, intron 1 of 14) CpG 171 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding common_peak1_71_80_-0.455193733785164_6.11225313599204_0.992609803880139 chr7 6154879 6155592 + 0.992609803880139 NA intron (NM_001013012, intron 1 of 2) CpG 736 NM_001013012 67109 Mm.3254 NM_001013012 ENSMUSG00000046792 Zfp787 2210018M03Rik|Znf787 zinc finger protein 787 protein-coding common_peak2_71_80_-0.455193733785164_6.11225313599204_0.992609803880139 chr5 110176552 110177453 + 0.992609803880139 NA promoter-TSS (NR_040430) promoter-TSS (NR_040430) 145 NM_008146 269682 Mm.9392 NM_008146 ENSMUSG00000029502 Golga3 5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|Mea2/Golga3|repro27 golgi autoantigen, golgin subfamily a, 3 protein-coding common_peak1_97_59_0.419412568184292_6.11659687970066_0.992609803880126 chr7 141168136 141168817 + 0.992609803880126 NA intron (NM_001172100, intron 1 of 9) intron (NM_001172100, intron 1 of 9) 210 NM_001172101 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak2_97_59_0.419412568184292_6.11659687970066_0.992609803880126 chr19 45005736 45006373 + 0.992609803880126 NA promoter-TSS (NM_153796) promoter-TSS (NM_153796) 388 NM_053164 94067 Mm.44174 NM_053164 ENSMUSG00000025208 Mrpl43 4930442D21Rik|bMRP36a mitochondrial ribosomal protein L43 protein-coding common_peak2_104_111_-0.382218306857589_6.61624576862881_0.991810039900215-2 chr17 35979682 35981147 + 0.991810039900215 NA promoter-TSS (NM_001165892) promoter-TSS (NM_001165892) 459 NM_008136 14670 Mm.335754 NM_008136 ENSMUSG00000024429 Gnl1 Gna-rs1|Gnal1 guanine nucleotide binding protein-like 1 protein-coding common_peak2_104_111_-0.382218306857589_6.61624576862881_0.991810039900215 chr16 30586769 30588193 + 0.991810039900215 NA exon (NM_178069, exon 1 of 14) exon (NM_178069, exon 1 of 14) 108 NM_178069 224092 Mm.567 NM_178069 ENSMUSG00000022538 Lsg1 5830465I20|AA409273|D16Bwg1547e large 60S subunit nuclear export GTPase 1 protein-coding common_peak2_287_197_0.241189689873363_7.74995146501629_0.991611875372029 chr8 19784619 19785374 + 0.991611875372029 NA intron (NM_001270553, intron 6 of 9) CpG 55420 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-4 chr11 20475638 20475989 + 0.991115276827166 NA Intergenic Intergenic -67440 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166 chr1 88744806 88745151 + 0.991115276827166 NA Intergenic Intergenic -9912 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166 chr1 57377698 57378100 + 0.991115276827166 NA promoter-TSS (NR_037999) promoter-TSS (NR_037999) 279 NM_028546 73467 Mm.263673 NM_028546 ENSMUSG00000038323 1700066M21Rik AI428479 RIKEN cDNA 1700066M21 gene protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-10 chr17 29549854 29550088 + 0.991115276827166 NA promoter-TSS (NM_001162901) promoter-TSS (NM_001162901) 169 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-6 chr15 66543268 66543764 + 0.991115276827166 NA intron (NM_172514, intron 5 of 9) intron (NM_172514, intron 5 of 9) 17530 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-19 chr7 139684225 139684620 + 0.991115276827166 NA promoter-TSS (NM_001302546) promoter-TSS (NM_001302546) -607 NM_001302546 212124 Mm.425507 NM_177212 ENSMUSG00000049571 Cfap46 9330101J02Rik|E030019B06Rik|Gm170|Ttc40 cilia and flagella associated protein 46 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-5 chr13 48625221 48625451 + 0.991115276827166 NA intron (NM_207232, intron 1 of 9) CpG 336 NM_207232 218232 Mm.315089 NM_207232 ENSMUSG00000038042 Ptpdc1 AI843923|AW456874|Naa-1|Ptpcd1 protein tyrosine phosphatase domain containing 1 protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-3 chr10 118120936 118121230 + 0.991115276827166 NA Intergenic Intergenic -20704 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-19 chr9 6168661 6169067 + 0.991115276827166 NA exon (NM_027924, exon 1 of 7) exon (NM_027924, exon 1 of 7) 378 NM_001357397 71785 Mm.390122 NM_027924 ENSMUSG00000032006 Pdgfd 1110003I09Rik platelet-derived growth factor, D polypeptide protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-6 chr4 43442451 43442750 + 0.991115276827166 NA 5' UTR (NM_011571, exon 1 of 10) 5' UTR (NM_011571, exon 1 of 10) 323 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-6 chr13 56599873 56600233 + 0.991115276827166 NA Intergenic Intergenic -9533 NM_009369 21810 Mm.14455 NM_009369 ENSMUSG00000035493 Tgfbi 68kDa|AI181842|AI747162|Beta-ig|big-h3 transforming growth factor, beta induced protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-16 chr5 32198928 32199351 + 0.991115276827166 NA Intergenic Intergenic -33569 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-6 chr5 105781587 105781977 + 0.991115276827166 NA intron (NM_001122768, intron 2 of 2) (TCTG)n|Simple_repeat|Simple_repeat 80972 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166 chr1 17488393 17488881 + 0.991115276827166 NA Intergenic Intergenic -113264 NM_053191 94227 Mm.442452 NM_053191 ENSMUSG00000067780 Pi15 P24TI|P25TI|PI-15|SugarCrisp peptidase inhibitor 15 protein-coding common_peak1_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-5 chrX 37126941 37127186 + 0.991115276827166 NA exon (NM_025937, exon 1 of 9) exon (NM_025937, exon 1 of 9) 300 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-11 chr19 11624629 11624956 + 0.991115276827166 NA Intergenic Intergenic -1073 NM_001276329 14126 Mm.329735 NM_013516 ENSMUSG00000024680 Ms4a2 FcRB|Fce1b|Fcer1b|Fcrbeta|Ms4a1|fcERI membrane-spanning 4-domains, subfamily A, member 2 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-9 chr16 24487735 24488107 + 0.991115276827166 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) 39830 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-2 chr2 84649086 84649402 + 0.991115276827166 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 236 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-9 chr8 106069898 106070179 + 0.991115276827166 NA intron (NM_010901, intron 1 of 9) intron (NM_010901, intron 1 of 9) 10435 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-18 chr7 80339110 80339616 + 0.991115276827166 NA intron (NM_133952, intron 2 of 19) intron (NM_133952, intron 2 of 19) 856 NM_133952 101869 Mm.243024 NM_133952 ENSMUSG00000030533 Unc45a AW538196 unc-45 myosin chaperone A protein-coding common_peak2_25_11_0.840575673733957_4.00525033758813_0.991115276827166 chr7 19319559 19319883 + 0.991115276827166 NA Intergenic Intergenic -9676 NM_001347586 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-12 chr2 6352298 6352628 + 0.991115276827166 NA promoter-TSS (NM_181399) promoter-TSS (NM_181399) -273 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-3 chr10 8518463 8518777 + 0.991115276827166 NA 5' UTR (NM_177387, exon 1 of 8) 5' UTR (NM_177387, exon 1 of 8) 205 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-13 chr2 126032838 126033135 + 0.991115276827166 NA intron (NM_029455, intron 11 of 16) intron (NM_029455, intron 11 of 16) -1672 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-20 chr8 11373664 11374135 + 0.991115276827166 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -61073 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-3 chr15 77917633 77917905 + 0.991115276827166 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 11225 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-23 chrX 136270801 136271169 + 0.991115276827166 NA intron (NM_001110234, intron 2 of 2) intron (NM_001110234, intron 2 of 2) 732 NM_001110234 12070 Mm.90787 NM_009750 ENSMUSG00000046432 Bex3 AL033356|DXWsu67e|Gcap27|Nade|Ngfrap1 brain expressed X-linked 3 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-4 chr11 118438936 118439204 + 0.991115276827166 NA intron (NM_019959, intron 1 of 3) intron (NM_019959, intron 1 of 3) -4464 NM_001204130 56745 Mm.23845 NM_019959 ENSMUSG00000017446 C1qtnf1 1600017K21Rik|CTRP1|Zsig37 C1q and tumor necrosis factor related protein 1 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-16 chr6 146928027 146928481 + 0.991115276827166 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 26167 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-21 chr9 123245541 123245896 + 0.991115276827166 NA Intergenic Intergenic 15071 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-8 chr5 88912140 88912485 + 0.991115276827166 NA intron (NM_001359211, intron 1 of 26) intron (NM_001359211, intron 1 of 26) 25052 NM_018760 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-6 chr6 121085285 121085750 + 0.991115276827166 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -3890 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-12 chr19 53551082 53551451 + 0.991115276827166 NA Intergenic Intergenic 21948 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-17 chr7 80198700 80199070 + 0.991115276827166 NA intron (NM_001360135, intron 1 of 13) intron (NM_001360135, intron 1 of 13) 444 NM_001360135 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-9 chr15 62150553 62150908 + 0.991115276827166 NA intron (NR_003368, intron 3 of 8) intron (NR_003368, intron 3 of 8) 68721 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-3 chr13 24194782 24195043 + 0.991115276827166 NA intron (NM_026825, intron 2 of 37) intron (NM_026825, intron 2 of 37) 85878 NM_001311122 68732 Mm.211047 NM_026825 ENSMUSG00000021338 Carmil1 1110037D04Rik|AI425970|CARMIL|CARML1|D130057M20|Lrrc16|Lrrc16a capping protein regulator and myosin 1 linker 1 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-7 chr15 84395790 84396090 + 0.991115276827166 NA intron (NM_001163145, intron 4 of 4) intron (NM_001163145, intron 4 of 4) 50670 NM_001347543 72301 Mm.275387 NM_001163145 ENSMUSG00000062760 1810041L15Rik Kiaa1644|Shisal1 RIKEN cDNA 1810041L15 gene protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-5 chr11 32565463 32565776 + 0.991115276827166 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 32353 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_12_21_-1.02683846460894_3.94601238633283_0.991115276827166 chr10 17006065 17006263 + 0.991115276827166 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 89618 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166 chr11 35919165 35919461 + 0.991115276827166 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 60776 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-12 chr9 45848287 45848807 + 0.991115276827166 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 10002 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-6 chr11 62553091 62553533 + 0.991115276827166 NA TTS (NR_002875) TTS (NR_002875) 1581 NM_001313984 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-4 chr10 96647979 96648452 + 0.991115276827166 NA Intergenic Intergenic 31214 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-2 chr1 157367896 157368297 + 0.991115276827166 NA intron (NM_177644, intron 1 of 17) intron (NM_177644, intron 1 of 17) -44256 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-18 chr6 17938928 17939246 + 0.991115276827166 NA intron (NM_022332, intron 15 of 15) intron (NM_022332, intron 15 of 15) 91358 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding common_peak2_24_11_0.784391341004396_3.97715817122335_0.991115276827166-4 chr9 124425927 124426128 + 0.991115276827166 NA Intergenic CpG 2240 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak1_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-3 chr4 62737730 62737947 + 0.991115276827166 NA Intergenic (T)n|Simple_repeat|Simple_repeat 63864 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-20 chr9 65016975 65017249 + 0.991115276827166 NA intron (NM_021345, intron 1 of 10) intron (NM_021345, intron 1 of 10) 4605 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-2 chr15 39771188 39771469 + 0.991115276827166 NA intron (NM_022722, intron 9 of 9) intron (NM_022722, intron 9 of 9) 25398 NM_001289508 75766 Mm.159563 NM_029422 ENSMUSG00000022303 Dcstamp 4833414I07Rik|DC-STAMP|FIND|Tm7sf4|mDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-5 chr5 92898216 92898508 + 0.991115276827166 NA intron (NM_001077596, intron 1 of 9) intron (NM_001077596, intron 1 of 9) 369 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-15 chr5 31606585 31606868 + 0.991115276827166 NA Intergenic Intergenic -7225 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-4 chr13 90799049 90799567 + 0.991115276827166 NA Intergenic Intergenic 106047 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-8 chr2 24455722 24456054 + 0.991115276827166 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 19711 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-4 chr7 51268475 51268825 + 0.991115276827166 NA Intergenic Intergenic -242379 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-10 chr16 57417178 57417638 + 0.991115276827166 NA intron (NM_001040397, intron 1 of 4) 7SLRNA|srpRNA|srpRNA 64131 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-7 chr5 123991950 123992188 + 0.991115276827166 NA intron (NM_145070, intron 7 of 31) intron (NM_145070, intron 7 of 31) -4783 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166 chr11 102603740 102604070 + 0.991115276827166 NA promoter-TSS (NM_020510) promoter-TSS (NM_020510) -526 NM_020510 57265 Mm.36416 NM_020510 ENSMUSG00000050288 Fzd2 AL033370|AW456835|Fz10|Fzd10|Mfz10|Mfz10a frizzled class receptor 2 protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166 chr12 99562141 99562500 + 0.991115276827166 NA Intergenic Intergenic -1521 NR_136760 102639404 Mm.396324 NR_136760 ENSMUSG00000097917 Gm26839 - predicted gene, 26839 ncRNA unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-2 chr1 138344168 138344440 + 0.991115276827166 NA Intergenic Intergenic 70566 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_24_11_0.784391341004396_3.97715817122335_0.991115276827166 chr15 37616626 37616882 + 0.991115276827166 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 63820 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-3 chr17 26615659 26615918 + 0.991115276827166 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) 54276 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-14 chr3 121601716 121602073 + 0.991115276827166 NA Intergenic RMER17C|LTR|ERVK 41591 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-2 chr13 74807563 74807794 + 0.991115276827166 NA intron (NM_001301153, intron 1 of 31) intron (NM_001301153, intron 1 of 31) 282 NM_009817 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-2 chr1 106399795 106400077 + 0.991115276827166 NA Intergenic Intergenic 146695 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_24_11_0.784391341004396_3.97715817122335_0.991115276827166-2 chr18 36408798 36409128 + 0.991115276827166 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 45532 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-7 chr15 7812047 7812393 + 0.991115276827166 NA intron (NM_010275, intron 1 of 2) intron (NM_010275, intron 1 of 2) -1507 NM_001301333 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-7 chr5 3493743 3494085 + 0.991115276827166 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -49919 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-8 chr15 62121827 62122063 + 0.991115276827166 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 82688 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-4 chr18 33946573 33947054 + 0.991115276827166 NA intron (NM_013512, intron 2 of 23) intron (NM_013512, intron 2 of 23) 60393 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-11 chr9 57077138 57077389 + 0.991115276827166 NA intron (NM_001357754, intron 1 of 20) intron (NM_001357754, intron 1 of 20) 887 NM_011378 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-22 chr9 108478763 108479256 + 0.991115276827166 NA promoter-TSS (NM_008483) promoter-TSS (NM_008483) -853 NM_008483 16779 Mm.27560 NM_008483 ENSMUSG00000052911 Lamb2 AW211941|Lamb-2|Lams|npht laminin, beta 2 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-13 chr3 97939651 97940002 + 0.991115276827166 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 9653 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-8 chr15 99420876 99421133 + 0.991115276827166 NA Intergenic Intergenic 27785 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-2 chr11 43820871 43821096 + 0.991115276827166 NA intron (NM_007416, intron 1 of 1) intron (NM_007416, intron 1 of 1) 15506 NM_007416 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-8 chr6 97311403 97311703 + 0.991115276827166 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -58773 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-11 chr6 120135087 120135444 + 0.991115276827166 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 41885 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_24_11_0.784391341004396_3.97715817122335_0.991115276827166-3 chr5 140608609 140608866 + 0.991115276827166 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 1396 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-7 chr16 55948925 55949496 + 0.991115276827166 NA Intergenic Intergenic -14362 NM_001159365 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-17 chr5 146846887 146847304 + 0.991115276827166 NA exon (NM_026864, exon 4 of 4) exon (NM_026864, exon 4 of 4) 2024 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-5 chr13 92844805 92845164 + 0.991115276827166 NA intron (NM_001162945, intron 1 of 8) CpG 197 NM_001162945 382793 Mm.296770 NM_001162945 ENSMUSG00000021704 Mtx3 4930470O13Rik|AA409304|AI853833|AU067765|EG624619|Gm1194|Gm6514 metaxin 3 protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-3 chr10 81541970 81542323 + 0.991115276827166 NA intron (NM_010301, intron 1 of 6) intron (NM_010301, intron 1 of 6) 2900 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-5 chr14 19823513 19823718 + 0.991115276827166 NA intron (NM_026528, intron 1 of 7) CpG 208 NM_026528 68045 Mm.21932 NM_026528 ENSMUSG00000021807 Rtraf 2700060E02Rik RNA transcription, translation and transport factor protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-11 chr17 13670673 13671136 + 0.991115276827166 NA Intergenic Intergenic -89637 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-21 chr9 67003996 67004315 + 0.991115276827166 NA Intergenic Intergenic -28671 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding unique_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-14 chr3 65299304 65299623 + 0.991115276827166 NA intron (NR_126080, intron 1 of 4) intron (NR_126080, intron 1 of 4) 3222 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-4 chr5 30901139 30901778 + 0.991115276827166 NA intron (NM_001048192, intron 12 of 16) intron (NM_001048192, intron 12 of 16) 6330 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding unique_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-15 chr4 109116287 109116751 + 0.991115276827166 NA intron (NM_001355190, intron 2 of 21) intron (NM_001355190, intron 2 of 21) 1517 NM_173350 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-10 chr7 127935647 127935983 + 0.991115276827166 NA exon (NM_001319147, exon 9 of 15) exon (NM_001319147, exon 9 of 15) -5702 NM_133351 76560 Mm.5875 NM_133351 ENSMUSG00000030800 Prss8 2410039E18Rik|AI313909|C79772|CAP1|fr|mCAP1 protease, serine 8 (prostasin) protein-coding common_peak1_24_11_0.784391341004396_3.97715817122335_0.991115276827166-5 chr3 57509237 57509573 + 0.991115276827166 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 66471 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-9 chr7 19910468 19910844 + 0.991115276827166 NA exon (NM_027514, exon 5 of 8) exon (NM_027514, exon 5 of 8) 10487 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding common_peak2_12_21_-1.02683846460894_3.94601238633283_0.991115276827166-7 chr7 28943174 28943687 + 0.991115276827166 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 18902 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-10 chr5 137778445 137778698 + 0.991115276827166 NA promoter-TSS (NM_001356989) promoter-TSS (NM_001356989) -333 NM_001356989 69871 Mm.276058 NM_027242 ENSMUSG00000029725 Ppp1r35 2010007H12Rik|2010011D20Rik|AL024004 protein phosphatase 1, regulatory subunit 35 protein-coding unique_peak1_25_11_0.840575673733957_4.00525033758813_0.991115276827166-9 chr3 59289708 59290151 + 0.991115276827166 NA intron (NM_177855, intron 38 of 43) intron (NM_177855, intron 38 of 43) -26944 NM_001357010 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak2_87_95_-0.41284207769734_6.37854146187249_0.9910708353943-2 chr18 6241011 6241532 + 0.9910708353943 NA 5' UTR (NM_008448, exon 1 of 26) 5' UTR (NM_008448, exon 1 of 26) 253 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding common_peak2_87_95_-0.41284207769734_6.37854146187249_0.9910708353943-3 chr9 69989197 69989924 + 0.9910708353943 NA promoter-TSS (NM_016787) promoter-TSS (NM_016787) 94 NM_001008238 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak2_87_95_-0.41284207769734_6.37854146187249_0.9910708353943 chr1 106713641 106714969 + 0.9910708353943 NA promoter-TSS (NM_177410) promoter-TSS (NM_177410) -15 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_115_72_0.378033482924004_6.37884130034202_0.991070835394275 chr1 184083963 184084918 + 0.991070835394275 NA Intergenic Intergenic 50059 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_204_136_0.285529403820546_7.2407967848708_0.990944465647887 chr7 126501657 126503326 + 0.990944465647887 NA promoter-TSS (NM_001347658) promoter-TSS (NM_001347658) -66 NM_001347658 233871 Mm.231450 NM_183020 ENSMUSG00000032637 Atxn2l A2D|A2LG|A2RP|A2lp|Atxnl2 ataxin 2-like protein-coding common_peak2_402_283_0.20209059113893_8.25079241507415_0.990804367412276 chr17 46028682 46032402 + 0.990804367412276 NA intron (NM_001025250, intron 1 of 7) CpG 1835 NM_001287058 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak1_192_127_0.297152370470192_7.1485761852351_0.990458180532039 chr19 10576480 10578059 + 0.990458180532039 NA promoter-TSS (NM_001302218) promoter-TSS (NM_001302218) 112 NM_001282064 225912 Mm.252701 NM_201351 ENSMUSG00000034445 Cyb561a3 2310004G04Rik|Cybasc3|Lcytb cytochrome b561 family, member A3 protein-coding common_peak2_155_157_-0.311516930641023_7.14802228285659_0.990458180532039 chr9 96782506 96783334 + 0.990458180532039 NA Intergenic Intergenic 17358 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_96_103_-0.388829163730014_6.50602513627608_0.990270949802597 chr17 56673327 56674082 + 0.990270949802597 NA intron (NM_001252467, intron 1 of 13) CpG 479 NM_027933 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak1_95_103_-0.403674030842329_6.49860270271993_0.990270949802597 chr4 130050685 130051932 + 0.990270949802597 NA intron (NM_028266, intron 2 of 69) intron (NM_028266, intron 2 of 69) 3468 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak1_95_103_-0.403674030842329_6.49860270271993_0.990270949802597-2 chr5 21786398 21787412 + 0.990270949802597 NA intron (NM_011188, intron 2 of 12) CpG-10856 1622 NM_011188 19181 Mm.2462 NM_011188 ENSMUSG00000028932 Psmc2 - proteasome (prosome, macropain) 26S subunit, ATPase 2 protein-coding common_peak1_497_354_0.183374049579841_8.56336223918197_0.990244283738668 chr11 77806663 77810688 + 0.990244283738668 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 7377 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-10 chr6 140354781 140354970 + 0.989110657569874 NA Intergenic Intergenic -69224 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874 chr11 62824130 62824335 + 0.989110657569874 NA intron (NM_053169, intron 1 of 5) intron (NM_053169, intron 1 of 5) 3979 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-3 chr13 111344799 111345002 + 0.989110657569874 NA Intergenic Intergenic 89887 NM_175497 238880 Mm.107293 NM_175497 ENSMUSG00000055194 Actbl2 4732495G21Rik actin, beta-like 2 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-2 chr1 92114285 92114477 + 0.989110657569874 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 65960 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-7 chr4 34260381 34260612 + 0.989110657569874 NA Intergenic Intergenic -210429 NM_026293 67652 Mm.55848 NM_026293 ENSMUSG00000028264 Spaca1 1700124L11Rik|4930540L03Rik sperm acrosome associated 1 protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-2 chr11 86568329 86568536 + 0.989110657569874 NA Intergenic B1_Mus2|SINE|Alu 15726 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-4 chr14 11616083 11616297 + 0.989110657569874 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 62637 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-8 chr5 113159261 113159510 + 0.989110657569874 NA intron (NM_172884, intron 1 of 7) ID_B1|SINE|B4 3928 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak2_6_4_0.223880958051052_2.43386857391289_0.989110657569874 chr10 12811981 12812187 + 0.989110657569874 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 49651 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-12 chr7 84500084 84500275 + 0.989110657569874 NA Intergenic Intergenic -28775 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-10 chr7 16874564 16874769 + 0.989110657569874 NA promoter-TSS (NM_001081655) promoter-TSS (NM_001081655) 220 NR_152128 320950 Mm.420078 NR_152128 ENSMUSG00000097842 9330104G04Rik - RIKEN cDNA 9330104G04 gene ncRNA unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-5 chr15 83417099 83417306 + 0.989110657569874 NA intron (NM_001358643, intron 1 of 9) B1F|SINE|Alu 15648 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak1_4_6_-0.743548019939442_2.43558091208788_0.989110657569874 chr3 101807045 101807240 + 0.989110657569874 NA Intergenic Intergenic 29081 NM_172295 242125 Mm.32900 NM_172295 ENSMUSG00000044313 Mab21l3 - mab-21-like 3 (C. elegans) protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-6 chr16 59492664 59492869 + 0.989110657569874 NA TTS (NM_025910) TTS (NM_025910) 20991 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Riox2 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204|Mina ribosomal oxygenase 2 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-3 chr1 160055857 160056052 + 0.989110657569874 NA intron (NM_001162896, intron 1 of 2) B1F|SINE|Alu 11574 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874 chr1 43254131 43254416 + 0.989110657569874 NA Intergenic B3|SINE|B2 -57512 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-4 chr11 5860557 5860785 + 0.989110657569874 NA Intergenic B1_Mus1|SINE|Alu -1195 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-13 chr9 33851776 33851976 + 0.989110657569874 NA Intergenic MIR|SINE|MIR -190495 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik TH-cre|Tg(Th-cre)1Tmd RIKEN cDNA 7630403G23 gene ncRNA common_peak1_4_6_-0.743548019939442_2.43558091208788_0.989110657569874 chr11 99385946 99386250 + 0.989110657569874 NA exon (NM_010660, exon 7 of 8) exon (NM_010660, exon 7 of 8) 3266 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-6 chr12 83763577 83763793 + 0.989110657569874 NA promoter-TSS (NM_130887) promoter-TSS (NM_130887) 51 NM_130887 170721 Mm.133443 NM_130887 ENSMUSG00000021223 Papln E030033C16Rik papilin, proteoglycan-like sulfated glycoprotein protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-9 chr5 108269786 108269988 + 0.989110657569874 NA intron (NM_026106, intron 1 of 2) intron (NM_026106, intron 1 of 2) 990 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-11 chr7 29767906 29768117 + 0.989110657569874 NA promoter-TSS (NM_023750) promoter-TSS (NM_023750) -541 NM_023750 74352 Mm.251083 NM_023750 ENSMUSG00000046185 Zfp84 2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69 zinc finger protein 84 protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-5 chr11 62831783 62831982 + 0.989110657569874 NA intron (NM_053169, intron 2 of 5) intron (NM_053169, intron 2 of 5) 11629 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-12 chr9 50883472 50883677 + 0.989110657569874 NA exon (NM_001034085, exon 15 of 17) exon (NM_001034085, exon 15 of 17) 26650 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-14 chr9 71403912 71404192 + 0.989110657569874 NA Intergenic Intergenic 80906 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-8 chr2 154437537 154437730 + 0.989110657569874 NA intron (NM_172860, intron 1 of 10) intron (NM_172860, intron 1 of 10) 1149 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-9 chr6 50397698 50397947 + 0.989110657569874 NA intron (NM_001163645, intron 2 of 21) ID_B1|SINE|B4 -14985 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_4_6_-0.743548019939442_2.43558091208788_0.989110657569874-11 chr7 144654518 144654727 + 0.989110657569874 NA intron (NM_001242349, intron 5 of 24) ID_B1|SINE|B4 -72186 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak1_6_4_0.223880958051052_2.43386857391289_0.989110657569874-7 chr16 94210019 94210254 + 0.989110657569874 NA intron (NM_001360045, intron 6 of 10) Charlie2b|DNA|hAT-Charlie 80155 NM_001360045 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-8 chr14 73237198 73237689 + 0.98872314135509 NA promoter-TSS (NM_175116) promoter-TSS (NM_175116) -448 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-5 chr19 41997180 41997507 + 0.98872314135509 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 15580 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-7 chr16 92440236 92440730 + 0.98872314135509 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) 25686 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509 chr10 13552632 13552996 + 0.98872314135509 NA promoter-TSS (NM_025748) promoter-TSS (NM_025748) -93 NM_025748 66757 Mm.331841 NM_025748 ENSMUSG00000019808 Adat2 4933426M09Rik|Deadc1 adenosine deaminase, tRNA-specific 2 protein-coding unique_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-3 chr4 124937291 124937577 + 0.98872314135509 NA promoter-TSS (NM_026560) promoter-TSS (NM_026560) 386 NM_001355603 194268 Mm.266907 NM_177573 ENSMUSG00000044730 9930104L06Rik C1orf109 RIKEN cDNA 9930104L06 gene protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-5 chr11 113268298 113268751 + 0.98872314135509 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -58855 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-4 chr13 51314797 51315197 + 0.98872314135509 NA Intergenic Intergenic -93621 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-13 chr19 10881268 10881636 + 0.98872314135509 NA intron (NM_134142, intron 1 of 3) intron (NM_134142, intron 1 of 3) 291 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-6 chr15 101376895 101377310 + 0.98872314135509 NA Intergenic Intergenic -6977 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-6 chr2 165326124 165326371 + 0.98872314135509 NA intron (NM_080287, intron 1 of 20) CpG 232 NM_080287 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509 chr10 93661883 93662264 + 0.98872314135509 NA intron (NM_021320, intron 2 of 9) intron (NM_021320, intron 2 of 9) 3781 NR_027478 667338 Mm.454582 NR_027478 Gm8580 EG667338 ribosomal protein L29 pseudogene pseudo common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-3 chr12 85279921 85280250 + 0.98872314135509 NA intron (NM_025421, intron 1 of 2) intron (NM_025421, intron 1 of 2) 350 NM_025421 66204 Mm.311985 NM_025421 ENSMUSG00000008822 Acyp1 1110039O14Rik|AI325944 acylphosphatase 1, erythrocyte (common) type protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-3 chr11 75464575 75464976 + 0.98872314135509 NA TTS (NR_029739) TTS (NR_029739) 1059 NR_029739 387141 NR_029739 ENSMUSG00000065529 Mir22 Mirn22|mmu-mir-22 microRNA 22 ncRNA common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-4 chr17 71195261 71195590 + 0.98872314135509 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) -9229 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-8 chr9 61914729 61915025 + 0.98872314135509 NA promoter-TSS (NM_018853) promoter-TSS (NM_018853) -367 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-2 chr1 138856342 138856740 + 0.98872314135509 NA intron (NM_001081226, intron 1 of 2) CpG 313 NM_001081226 69549 Mm.264673 NM_001081226 ENSMUSG00000079283 2310009B15Rik - RIKEN cDNA 2310009B15 gene protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-7 chr6 52230866 52231153 + 0.98872314135509 NA promoter-TSS (NR_029912) promoter-TSS (NR_029912) -844 NR_029912 723820 NR_029912 ENSMUSG00000065443 Mir196b Mirn196b|mir-196b microRNA 196b ncRNA common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509 chr1 24107652 24107952 + 0.98872314135509 NA Intergenic Intergenic -7461 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-8 chr19 44752053 44752659 + 0.98872314135509 NA Intergenic G-rich|Low_complexity|Low_complexity -5038 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-5 chr14 67188577 67189117 + 0.98872314135509 NA Intergenic Intergenic -44445 NM_010095 13592 Mm.319947 NM_010095 ENSMUSG00000022053 Ebf2 D14Ggc1e|EBF-2|Mmot1|O/E-3|OE-3 early B cell factor 2 protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-16 chr7 118740406 118741015 + 0.98872314135509 NA exon (NM_027815, exon 1 of 31) exon (NM_027815, exon 1 of 31) 439 NM_027815 71517 Mm.213298 NM_027815 ENSMUSG00000030982 9030624J02Rik 2610029J22Rik RIKEN cDNA 9030624J02 gene protein-coding common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509 chr14 103346410 103346772 + 0.98872314135509 NA 5' UTR (NM_207215, exon 1 of 85) 5' UTR (NM_207215, exon 1 of 85) 209 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-7 chr8 10865154 10865652 + 0.98872314135509 NA Intergenic Intergenic 17051 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-2 chr15 62289532 62289912 + 0.98872314135509 NA Intergenic Intergenic -70271 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-2 chr17 7320152 7320759 + 0.98872314135509 NA Intergenic Intergenic -4205 NM_011553 21461 Mm.264651 NM_011553 ENSMUSG00000071322 Tcp10a D17Leh66A|D17Leh66aa|Gm10326|T66A-a|Tcp-10a t-complex protein 10a protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-15 chr4 148514266 148514680 + 0.98872314135509 NA intron (NM_020009, intron 29 of 57) intron (NM_020009, intron 29 of 57) -14011 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-8 chr7 80246556 80246782 + 0.98872314135509 NA intron (NM_177765, intron 1 of 14) intron (NM_177765, intron 1 of 14) 293 NM_177765 269954 Mm.276780 NM_177765 ENSMUSG00000045467 Ttll13 1700111A04Rik|4921538O11|BC024578 tubulin tyrosine ligase-like family, member 13 protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-10 chr17 34647239 34647569 + 0.98872314135509 NA intron (NM_017406, intron 1 of 17) CpG 258 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak1_19_29_-0.857193652636845_4.4782937692901_0.98872314135509 chr2 75612715 75613009 + 0.98872314135509 NA Intergenic Intergenic -46397 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-4 chr15 79368722 79369047 + 0.98872314135509 NA intron (NM_172608, intron 5 of 8) intron (NM_172608, intron 5 of 8) 6416 NR_035464 100316695 NR_035464 ENSMUSG00000088901 Mir1943 mir-1943|mmu-mir-1943 microRNA 1943 ncRNA common_peak1_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-3 chr9 3404214 3404575 + 0.98872314135509 NA intron (NM_027545, intron 1 of 17) intron (NM_027545, intron 1 of 17) 309 NM_027545 244672 Mm.245482 NM_027545 ENSMUSG00000025898 Cwf19l2 3230401L03Rik|9030209E10 CWF19-like 2, cell cycle control (S. pombe) protein-coding unique_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-4 chr7 19920806 19921083 + 0.98872314135509 NA intron (NM_027514, intron 1 of 7) GC_rich|Low_complexity|Low_complexity 199 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding unique_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-5 chrX 74392623 74393031 + 0.98872314135509 NA promoter-TSS (NM_001161423) promoter-TSS (NM_001161423) 447 NM_025473 66294 Mm.166485 NM_025473 ENSMUSG00000031399 Fam3a 1810037C20Rik family with sequence similarity 3, member A protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-6 chr13 45680437 45680774 + 0.98872314135509 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 173161 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509 chr1 82282817 82283134 + 0.98872314135509 NA intron (NM_010570, intron 1 of 1) intron (NM_010570, intron 1 of 1) 8464 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-9 chr17 14943408 14943788 + 0.98872314135509 NA promoter-TSS (NM_175173) promoter-TSS (NM_175173) 414 NM_026451 67912 Mm.390949 NM_026451 ENSMUSG00000050088 1600012H06Rik - RIKEN cDNA 1600012H06 gene protein-coding common_peak1_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-2 chr14 26668527 26668810 + 0.98872314135509 NA TTS (NR_106132) TTS (NR_106132) 940 NR_106132 102465773 NR_106132 ENSMUSG00000098751 Mir7672 Gm27314|mmu-mir-7672 microRNA 7672 ncRNA common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-5 chr3 97297628 97297907 + 0.98872314135509 NA Intergenic Intergenic -70403 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-4 chr11 96828616 96829084 + 0.98872314135509 NA intron (NM_008686, intron 1 of 4) PB1D10|SINE|Alu 652 NM_001130450 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding unique_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-2 chr4 89442222 89442503 + 0.98872314135509 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -131330 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-3 chr11 101687232 101687705 + 0.98872314135509 NA Intergenic Intergenic 21927 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-7 chr13 75797332 75797807 + 0.98872314135509 NA Intergenic B1_Mur2|SINE|Alu -42316 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509 chr10 81297563 81298071 + 0.98872314135509 NA intron (NM_001293647, intron 1 of 17) intron (NM_001293647, intron 1 of 17) 4854 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-17 chr7 139273669 139274092 + 0.98872314135509 NA Intergenic Intergenic 25398 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-9 chr4 126149606 126150287 + 0.98872314135509 NA TTS (NM_172145) TTS (NM_172145) 1943 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-2 chr11 72143472 72143904 + 0.98872314135509 NA Intergenic Intergenic -7799 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-2 chr10 110919817 110920088 + 0.98872314135509 NA promoter-TSS (NM_007792) promoter-TSS (NM_007792) -224 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding common_peak1_20_29_-0.787300920015895_4.51324013560057_0.98872314135509 chr1 10169663 10170007 + 0.98872314135509 NA intron (NM_001102430, intron 21 of 37) intron (NM_001102430, intron 21 of 37) 62835 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-12 chr19 10059126 10059542 + 0.98872314135509 NA 3' UTR (NM_021890, exon 12 of 12) 3' UTR (NM_021890, exon 12 of 12) 17786 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding common_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-3 chr12 79539994 79540500 + 0.98872314135509 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 242896 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_19_29_-0.857193652636845_4.4782937692901_0.98872314135509-5 chr6 85137387 85137844 + 0.98872314135509 NA exon (NM_011467, exon 1 of 3) exon (NM_011467, exon 1 of 3) 149 NM_011467 20751 Mm.28393 NM_011467 ENSMUSG00000033735 Spr AA409688|Gm10328 sepiapterin reductase protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-11 chr17 45771836 45772271 + 0.98872314135509 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 37547 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-2 chr1 105434153 105434529 + 0.98872314135509 NA Intergenic Intergenic -77631 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-3 chr17 35879836 35880159 + 0.98872314135509 NA exon (NM_026987, exon 1 of 20) exon (NM_026987, exon 1 of 20) 219 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding unique_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-10 chr8 86768194 86768564 + 0.98872314135509 NA Intergenic Intergenic -22373 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak1_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-4 chrX 164076289 164076494 + 0.98872314135509 NA promoter-TSS (NM_001308386) promoter-TSS (NM_001308386) 102 NM_001308385 20438 Mm.37215 NM_009173 ENSMUSG00000040749 Siah1b AA960570|Sinh1b|siah-1b siah E3 ubiquitin protein ligase 1B protein-coding common_peak2_34_17_0.681430991103491_4.51064049699406_0.98872314135509-4 chr18 77949443 77949753 + 0.98872314135509 NA intron (NM_001195633, intron 2 of 43) intron (NM_001195633, intron 2 of 43) 11131 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_34_17_0.681430991103491_4.51064049699406_0.98872314135509-14 chr3 32737202 32737610 + 0.98872314135509 NA promoter-TSS (NM_029017) promoter-TSS (NM_029017) 343 NM_025316 66046 Mm.28058 NM_025316 ENSMUSG00000027673 Ndufb5 0610007D05Rik|AU015782|CI-SGDH|SGDH NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 protein-coding unique_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509 chr3 119746141 119746885 + 0.98872314135509 NA intron (NM_001310711, intron 7 of 13) intron (NM_001310711, intron 7 of 13) 36875 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_20_29_-0.787300920015895_4.51324013560057_0.98872314135509-6 chr6 88841532 88841815 + 0.98872314135509 NA TTS (NM_176973) TTS (NM_176973) 262 NM_001362152 80283 Mm.166858 NM_030251 ENSMUSG00000030083 Abtb1 AI847549|BC003234|BPOZ|EF1ABP ankyrin repeat and BTB (POZ) domain containing 1 protein-coding common_peak1_146_94_0.337283157689317_6.73849718717561_0.988669335115764 chr4 136052434 136053404 + 0.988669335115764 NA intron (NM_025919, intron 1 of 5) CpG 452 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding common_peak2_146_94_0.337283157689317_6.73849718717561_0.988669335115764 chr4 136052421 136053415 + 0.988669335115764 NA intron (NM_025919, intron 1 of 5) CpG 453 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding common_peak1_205_137_0.282007928706814_7.24952842113158_0.986404702781258 chr7 143052917 143055307 + 0.986404702781258 NA promoter-TSS (NR_110354) promoter-TSS (NR_110354) -426 NR_110354 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA common_peak1_107_66_0.399402680869143_6.26579053089234_0.985833214079905 chr19 41912056 41912630 + 0.985833214079905 NA intron (NM_023418, intron 1 of 3) CpG 472 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak2_79_88_-0.440146447141212_6.25566020739579_0.985833214079905-2 chr8 12671625 12672658 + 0.985833214079905 NA promoter-TSS (NM_198031) promoter-TSS (NM_198031) -41 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding common_peak1_107_66_0.399402680869143_6.26579053089234_0.985833214079905-2 chr3 89912207 89913563 + 0.985833214079905 NA intron (NM_010559, intron 1 of 9) CpG 311 NM_001310676 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding common_peak2_80_88_-0.422350977838784_6.26455794204701_0.985833214079905-2 chr4 40853026 40853897 + 0.985833214079905 NA exon (NM_022305, exon 1 of 6) exon (NM_022305, exon 1 of 6) 1076 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak2_80_88_-0.422350977838784_6.26455794204701_0.985833214079905 chr11 101253650 101254428 + 0.985833214079905 NA exon (NM_001284414, exon 2 of 6) exon (NM_001284414, exon 2 of 6) 332 NM_026776 28084 Mm.301020 NM_026776 ENSMUSG00000078656 Vps25 1110020N13Rik|AW107467|D11Wsu68e vacuolar protein sorting 25 protein-coding common_peak2_79_88_-0.440146447141212_6.25566020739579_0.985833214079905-3 chr9 111117774 111119054 + 0.985833214079905 NA intron (NM_027742, intron 1 of 13) CpG 303 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_79_88_-0.440146447141212_6.25566020739579_0.985833214079905 chr13 69611834 69612613 + 0.985833214079905 NA promoter-TSS (NM_175283) promoter-TSS (NM_175283) 207 NM_145354 28114 Mm.260009 NM_145354 ENSMUSG00000021595 Nsun2 D13Wsu123e|Misu NOL1/NOP2/Sun domain family member 2 protein-coding common_peak2_58_67_-0.488061755927659_5.84343196328651_0.985819031340023-2 chr6 50566760 50567327 + 0.985819031340023 NA promoter-TSS (NM_007808) promoter-TSS (NM_007808) 400 NR_015581 73183 Mm.430720 NR_015581 ENSMUSG00000085776 5430402O13Rik 3110047M22Rik RIKEN cDNA 5430402O13 gene ncRNA common_peak2_58_67_-0.488061755927659_5.84343196328651_0.985819031340023 chr12 84218202 84219358 + 0.985819031340023 NA 5' UTR (NM_001163501, exon 1 of 13) 5' UTR (NM_001163501, exon 1 of 13) 101 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_58_67_-0.488061755927659_5.84343196328651_0.985819031340023-3 chr8 47714172 47714777 + 0.985819031340023 NA promoter-TSS (NM_172407) promoter-TSS (NM_172407) -543 NM_172407 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak2_57_67_-0.512549819873072_5.8311879313138_0.985819031340023 chr4 133583702 133584456 + 0.985819031340023 NA promoter-TSS (NM_133884) promoter-TSS (NM_133884) -294 NM_001290742 100210 Mm.274001 NM_133884 ENSMUSG00000028848 Gpn2 AI838661|Atpbd1b|R74630 GPN-loop GTPase 2 protein-coding common_peak1_81_48_0.45624972348523_5.84283470585782_0.985819031340023-3 chr8 105225257 105226010 + 0.985819031340023 NA intron (NM_145604, intron 1 of 15) intron (NM_145604, intron 1 of 15) 445 NM_145604 234678 Mm.27186 NM_145604 ENSMUSG00000031889 D230025D16Rik BC006874|Lin10 RIKEN cDNA D230025D16 gene protein-coding common_peak2_81_48_0.45624972348523_5.84283470585782_0.985819031340023 chr14 34310857 34311597 + 0.985819031340023 NA promoter-TSS (NM_029389) promoter-TSS (NM_029389) 500 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding common_peak1_81_48_0.45624972348523_5.84283470585782_0.985819031340023-2 chr18 80933421 80934044 + 0.985819031340023 NA intron (NM_015805, intron 1 of 28) CpG 326 NM_001201569 50771 Mm.247138 NM_015805 ENSMUSG00000024566 Atp9b AA934181|Atpc2b|IIb|MMR ATPase, class II, type 9B protein-coding common_peak1_81_48_0.45624972348523_5.84283470585782_0.985819031340023 chr1 161734573 161735514 + 0.985819031340023 NA Intergenic Intergenic 53452 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_81_48_0.45624972348523_5.84283470585782_0.985819031340023-2 chr8 105225257 105226009 + 0.985819031340023 NA intron (NM_145604, intron 1 of 15) intron (NM_145604, intron 1 of 15) 445 NM_145604 234678 Mm.27186 NM_145604 ENSMUSG00000031889 D230025D16Rik BC006874|Lin10 RIKEN cDNA D230025D16 gene protein-coding common_peak1_136_87_0.346783955478482_6.63282359637654_0.984830444144747 chr14 87415912 87417799 + 0.984830444144747 NA intron (NM_001253755, intron 1 of 11) CpG 272 NM_001253755 219249 Mm.35168 NM_172605 ENSMUSG00000022019 Tdrd3 4732418C03Rik|6720468N18 tudor domain containing 3 protein-coding common_peak1_105_112_-0.381463886718572_6.6294470190559_0.984830444144723 chr16 11008451 11009261 + 0.984830444144723 NA promoter-TSS (NR_040518) promoter-TSS (NR_040518) -42 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-14 chr8 109681849 109682309 + 0.983972868822056 NA intron (NR_155034, intron 4 of 10) intron (NR_155034, intron 4 of 10) 11215 NR_155034 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-9 chr4 130037443 130038128 + 0.983972868822056 NA Intergenic MIR|SINE|MIR -10055 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-2 chr11 69980802 69981050 + 0.983972868822056 NA promoter-TSS (NM_026017) promoter-TSS (NM_026017) -242 NM_026017 67181 Mm.41678 NM_026017 ENSMUSG00000018559 Ctdnep1 2610507E10Rik|Dullard CTD nuclear envelope phosphatase 1 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-4 chr10 108337045 108337360 + 0.983972868822056 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 5013 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-8 chr4 88437242 88437890 + 0.983972868822056 NA intron (NM_025760, intron 1 of 6) intron (NM_025760, intron 1 of 6) 1360 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-7 chr4 109202024 109202233 + 0.983972868822056 NA exon (NM_133885, exon 1 of 23) exon (NM_133885, exon 1 of 23) 144 NM_133885 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak2_29_14_0.72364194959061_4.26871157040382_0.983972868822056-2 chr13 75797432 75797786 + 0.983972868822056 NA Intergenic Intergenic -42276 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-2 chr10 77145769 77146118 + 0.983972868822056 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 20587 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056 chr10 67912352 67912962 + 0.983972868822056 NA promoter-TSS (NM_178679) promoter-TSS (NM_178679) 5 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056 chr1 91302241 91302657 + 0.983972868822056 NA intron (NM_016717, intron 2 of 11) intron (NM_016717, intron 2 of 11) 4111 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak1_16_25_-0.883553881231396_4.25866277752539_0.983972868822056 chr11 20955986 20956345 + 0.983972868822056 NA Intergenic Intergenic -125057 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-9 chr18 57981978 57982656 + 0.983972868822056 NA Intergenic Intergenic 103639 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-5 chr11 113144059 113144460 + 0.983972868822056 NA intron (NR_015556, intron 1 of 2) A-rich|Low_complexity|Low_complexity 57579 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_29_14_0.72364194959061_4.26871157040382_0.983972868822056-5 chr2 145862432 145862673 + 0.983972868822056 NA intron (NM_028724, intron 9 of 12) intron (NM_028724, intron 9 of 12) -40689 NM_026425 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-3 chr11 3566536 3566874 + 0.983972868822056 NA Intergenic Intergenic -27413 NM_001284428 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-2 chr18 39378931 39379161 + 0.983972868822056 NA Intergenic Intergenic 108199 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-15 chr8 24517668 24517954 + 0.983972868822056 NA Intergenic Intergenic -32825 NR_035483 unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-12 chr7 100733147 100733574 + 0.983972868822056 NA intron (NM_178764, intron 2 of 8) intron (NM_178764, intron 2 of 8) 26725 NM_001362170 319604 Mm.260362 NM_178764 ENSMUSG00000029461 Fam168a 2610030B18Rik|B930006L02Rik|mKIAA0280 family with sequence similarity 168, member A protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-9 chr6 135067440 135068156 + 0.983972868822056 NA intron (NM_181444, intron 1 of 3) RSINE1|SINE|B4 2136 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-10 chr8 119723301 119723572 + 0.983972868822056 NA intron (NM_026922, intron 3 of 26) intron (NM_026922, intron 3 of 26) 23427 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-9 chr7 113513014 113513412 + 0.983972868822056 NA promoter-TSS (NM_027379) promoter-TSS (NM_027379) -621 NM_001285831 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-6 chr13 28739794 28740361 + 0.983972868822056 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -29204 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-6 chr11 50225840 50226299 + 0.983972868822056 NA intron (NM_145926, intron 1 of 14) intron (NM_145926, intron 1 of 14) 734 NM_145926 103534 Mm.86759 NM_145926 ENSMUSG00000036620 Mgat4b AA407995|GnTIVb mannoside acetylglucosaminyltransferase 4, isoenzyme B protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056 chr10 127188502 127188727 + 0.983972868822056 NA 5' UTR (NM_001358557, exon 1 of 15) 5' UTR (NM_001358557, exon 1 of 15) 158 NM_001358557 52666 Mm.272230 NM_028027 ENSMUSG00000019467 Arhgef25 2410008H17Rik|D10Ertd610e|GEFT Rho guanine nucleotide exchange factor (GEF) 25 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-13 chr8 77610206 77610640 + 0.983972868822056 NA 5' UTR (NM_145599, exon 1 of 10) 5' UTR (NM_145599, exon 1 of 10) 230 NM_145599 234463 Mm.273578 NM_145599 ENSMUSG00000031617 Tmem184c 8430433H16Rik|AI645453|AL033298|BC004056|Tmem34 transmembrane protein 184C protein-coding common_peak2_29_14_0.72364194959061_4.26871157040382_0.983972868822056-3 chr2 32776038 32776405 + 0.983972868822056 NA promoter-TSS (NM_001290567) promoter-TSS (NM_001290567) 400 NM_178595 329384 Mm.268037 NM_178595 ENSMUSG00000053746 Ptrh1 2210013M04Rik|AW046744 peptidyl-tRNA hydrolase 1 homolog protein-coding unique_peak2_29_14_0.72364194959061_4.26871157040382_0.983972868822056 chr15 74625116 74625399 + 0.983972868822056 NA intron (NM_001177437, intron 10 of 26) intron (NM_001177437, intron 10 of 26) 11061 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-3 chr12 80344168 80344539 + 0.983972868822056 NA intron (NM_177267, intron 8 of 8) intron (NM_177267, intron 8 of 8) 47324 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-4 chr11 78167291 78167756 + 0.983972868822056 NA exon (NM_080849, exon 13 of 15) exon (NM_080849, exon 13 of 15) -1973 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-6 chr17 66077334 66077597 + 0.983972868822056 NA promoter-TSS (NM_001025572) promoter-TSS (NM_001025572) -419 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-16 chrX 12090460 12090903 + 0.983972868822056 NA intron (NM_001168321, intron 1 of 13) CpG -10128 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-2 chr12 35734978 35735329 + 0.983972868822056 NA Intergenic Intergenic -40035 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-8 chr16 34527958 34528365 + 0.983972868822056 NA Intergenic Intergenic -14134 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-3 chr10 77251581 77251881 + 0.983972868822056 NA Intergenic Intergenic 7492 NR_026944 100169878 Mm.420901 NR_026944 ENSMUSG00000078444 Gm10941 - predicted gene 10941 ncRNA unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-11 chr5 140518591 140519213 + 0.983972868822056 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 13293 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-7 chr4 58401786 58402144 + 0.983972868822056 NA Intergenic Intergenic 39133 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-14 chr7 89338477 89338764 + 0.983972868822056 NA 5' UTR (NM_001360745, exon 1 of 14) 5' UTR (NM_001360745, exon 1 of 14) 167 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-10 chr19 42257667 42258126 + 0.983972868822056 NA intron (NM_027694, intron 1 of 4) URR1B|DNA|hAT-Charlie 2157 NM_027694 71146 Mm.329851 NM_027694 ENSMUSG00000042532 Golga7b 4933417O08Rik|AI839934 golgi autoantigen, golgin subfamily a, 7B protein-coding common_peak2_29_14_0.72364194959061_4.26871157040382_0.983972868822056 chr13 45402959 45403202 + 0.983972868822056 NA intron (NM_153789, intron 2 of 6) intron (NM_153789, intron 2 of 6) 13338 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-4 chr14 25492256 25492479 + 0.983972868822056 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 33182 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-11 chr9 45846637 45846940 + 0.983972868822056 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 8243 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-11 chr3 144991429 144991867 + 0.983972868822056 NA Intergenic ORR1F|LTR|ERVL-MaLR -16603 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-3 chr13 15808102 15808410 + 0.983972868822056 NA intron (NR_046131, intron 1 of 4) intron (NR_046131, intron 1 of 4) 1013 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-8 chr6 38534846 38535111 + 0.983972868822056 NA exon (NM_025363, exon 1 of 2) exon (NM_025363, exon 1 of 2) 117 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-4 chr14 7847135 7847737 + 0.983972868822056 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 29479 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-5 chr11 44618268 44618624 + 0.983972868822056 NA intron (NM_001290709, intron 1 of 15) CpG 346 NM_001290710 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-10 chr5 5327155 5327668 + 0.983972868822056 NA intron (NM_011074, intron 2 of 14) intron (NM_011074, intron 2 of 14) 52840 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-10 chr7 34342750 34343205 + 0.983972868822056 NA Intergenic B1_Mus1|SINE|Alu 46728 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak2_29_14_0.72364194959061_4.26871157040382_0.983972868822056-4 chr2 127255829 127256162 + 0.983972868822056 NA intron (NM_175145, intron 2 of 3) intron (NM_175145, intron 2 of 3) 8020 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-12 chr5 143641579 143642064 + 0.983972868822056 NA intron (NM_011182, intron 1 of 12) intron (NM_011182, intron 1 of 12) -9420 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056 chr11 53352628 53353215 + 0.983972868822056 NA intron (NM_033565, intron 1 of 20) intron (NM_033565, intron 1 of 20) 2154 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak1_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-3 chr7 16387519 16387759 + 0.983972868822056 NA intron (NM_019748, intron 1 of 8) CpG 257 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding common_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-5 chr17 15041774 15041986 + 0.983972868822056 NA promoter-TSS (NM_011560) promoter-TSS (NM_011560) 240 NM_001360401 381062 Mm.393767 NM_183133 ENSMUSG00000036552 Ermard 2210404J11Rik|2410011O22Rik|AI448938 ER membrane associated RNA degradation protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-5 chr14 70074355 70074821 + 0.983972868822056 NA Intergenic CpG -2857 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-13 chr6 87219333 87219863 + 0.983972868822056 NA intron (NM_054041, intron 12 of 17) intron (NM_054041, intron 12 of 17) 114852 NM_001167937 52372 Mm.282851 NM_001167937 ENSMUSG00000090891 D6Ertd527e AU043841 DNA segment, Chr 6, ERATO Doi 527, expressed protein-coding common_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-6 chr2 77268934 77269234 + 0.983972868822056 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 11508 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-8 chr16 35869286 35869711 + 0.983972868822056 NA intron (NM_001039530, intron 1 of 16) intron (NM_001039530, intron 1 of 16) 1884 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding unique_peak1_29_14_0.72364194959061_4.26871157040382_0.983972868822056-7 chr16 30513281 30513691 + 0.983972868822056 NA 3' UTR (NM_172614, exon 10 of 10) 3' UTR (NM_172614, exon 10 of 10) 37092 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-2 chr10 43604330 43604793 + 0.983972868822056 NA intron (NR_033558, intron 2 of 2) intron (NR_033558, intron 2 of 2) 11134 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA common_peak1_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-4 chrX 162887954 162888258 + 0.983972868822056 NA exon (NM_025932, exon 1 of 9) exon (NM_025932, exon 1 of 9) 356 NM_025932 67043 Mm.44207 NM_025932 ENSMUSG00000031357 Syap1 2010110O17Rik|AW011796|BSTA synapse associated protein 1 protein-coding unique_peak2_16_25_-0.883553881231396_4.25866277752539_0.983972868822056-7 chr15 38199233 38199801 + 0.983972868822056 NA Intergenic Intergenic -19686 NM_008757 18285 Mm.252830 NM_008757 ENSMUSG00000061923 Odf1 - outer dense fiber of sperm tails 1 protein-coding common_peak1_462_328_0.188713656468101_8.45630060196929_0.983869593831855 chr12 86881208 86884672 + 0.983869593831855 NA exon (NM_145836, exon 1 of 1) exon (NM_145836, exon 1 of 1) 1874 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132-2 chr3 117869035 117869601 + 0.983321682013132 NA promoter-TSS (NM_029655) promoter-TSS (NM_029655) -382 NM_029655 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding common_peak2_59_33_0.536014724375546_5.35547020343811_0.983321682013132 chr11 79339049 79339470 + 0.983321682013132 NA promoter-TSS (NM_010897) promoter-TSS (NM_010897) -633 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132-5 chr8 78741986 78742872 + 0.983321682013132 NA Intergenic Intergenic 78723 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_59_33_0.536014724375546_5.35547020343811_0.983321682013132-2 chr6 29435120 29435689 + 0.983321682013132 NA intron (NM_001081185, intron 1 of 47) intron (NM_001081185, intron 1 of 47) 2148 NM_001311074 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding common_peak2_39_49_-0.601214226376294_5.34324907658658_0.983321682013132 chr1 170867356 170867770 + 0.983321682013132 NA intron (NM_001081304, intron 1 of 15) CpG 208 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132-4 chr7 89837348 89837888 + 0.983321682013132 NA intron (NM_181407, intron 7 of 13) intron (NM_181407, intron 7 of 13) 66011 NM_001162979 70884 Mm.252823 NM_001162979 ENSMUSG00000039391 Ccdc81 4921513D09Rik coiled-coil domain containing 81 protein-coding common_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132 chr11 98940360 98941197 + 0.983321682013132 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 1067 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_39_49_-0.601214226376294_5.34324907658658_0.983321682013132-2 chr2 160731854 160732578 + 0.983321682013132 NA intron (NM_021280, intron 2 of 33) intron (NM_021280, intron 2 of 33) 906 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding unique_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132-2 chr9 44964733 44965545 + 0.983321682013132 NA intron (NM_001361075, intron 1 of 8) intron (NM_001361075, intron 1 of 8) 461 NM_001346698 140630 Mm.215069 NM_145400 ENSMUSG00000059890 Ube4a 4732444G18Rik|9930123J21Rik|UFD2b ubiquitination factor E4A protein-coding common_peak2_39_49_-0.601214226376294_5.34324907658658_0.983321682013132-4 chr9 59291646 59292361 + 0.983321682013132 NA intron (NM_001359282, intron 1 of 6) CpG 431 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding common_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132-3 chr4 130111665 130112358 + 0.983321682013132 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 4455 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_39_49_-0.601214226376294_5.34324907658658_0.983321682013132-3 chr2 173021952 173023028 + 0.983321682013132 NA intron (NM_019547, intron 1 of 3) intron (NM_019547, intron 1 of 3) 588 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak1_59_33_0.536014724375546_5.35547020343811_0.983321682013132 chr13 97915367 97916193 + 0.983321682013132 NA intron (NM_012026, intron 35 of 35) intron (NM_012026, intron 35 of 35) 164668 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA common_peak2_88_96_-0.411605615787201_6.39411003429353_0.982853343757796 chr1 43254695 43256147 + 0.982853343757796 NA Intergenic Intergenic -58660 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_116_73_0.370701033707828_6.39480388248286_0.982853343757796 chr11 109362940 109363731 + 0.982853343757796 NA non-coding (NR_038097, exon 1 of 2) non-coding (NR_038097, exon 1 of 2) 319 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 - predicted gene 11696 ncRNA common_peak2_88_96_-0.411605615787201_6.39411003429353_0.982853343757796-2 chr5 67306714 67308316 + 0.982853343757796 NA intron (NM_178651, intron 1 of 17) intron (NM_178651, intron 1 of 17) 560 NM_001310629 109108 Mm.234455 NM_178651 ENSMUSG00000029221 Slc30a9 2310024J23Rik|AL024256|GAC63|HUEL|znT-9 solute carrier family 30 (zinc transporter), member 9 protein-coding common_peak1_116_73_0.370701033707828_6.39480388248286_0.982853343757796-2 chr13 5836131 5837332 + 0.982853343757796 NA Intergenic Intergenic 21361 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_126_80_0.357789618689291_6.51874481222927_0.982736010510403-2 chr12 3778027 3779357 + 0.982736010510403 NA intron (NR_027870, intron 18 of 19) intron (NR_027870, intron 18 of 19) -28288 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak2_126_80_0.357789618689291_6.51874481222927_0.982736010510403 chr10 89532611 89534113 + 0.982736010510403 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 260 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding common_peak1_98_60_0.410109269489082_6.13579197230743_0.982726052066014 chr7 24462507 24463423 + 0.982726052066014 NA intron (NM_011113, intron 1 of 6) intron (NM_011113, intron 1 of 6) 482 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak1_72_81_-0.453136569052157_6.13098372009201_0.982726052066001 chr1 155050508 155051140 + 0.982726052066001 NA Intergenic Intergenic 32440 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_72_81_-0.453136569052157_6.13098372009201_0.982726052066001-2 chr9 70284436 70285396 + 0.982726052066001 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 77566 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_72_81_-0.453136569052157_6.13098372009201_0.982726052066001 chr15 96461201 96461842 + 0.982726052066001 NA promoter-TSS (NM_028148) promoter-TSS (NM_028148) -678 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak2_65_74_-0.468807685671366_5.9944148476602_0.982403616259003-2 chr6 31099322 31100123 + 0.982403616259003 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -36629 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_65_74_-0.468807685671366_5.9944148476602_0.982403616259003 chr2 129207109 129207805 + 0.982403616259003 NA intron (NM_001355252, intron 1 of 5) intron (NM_001355252, intron 1 of 5) 361 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_65_74_-0.468807685671366_5.9944148476602_0.982403616259003 chr11 78536441 78537350 + 0.982403616259003 NA promoter-TSS (NM_001159392) promoter-TSS (NM_001159392) 534 NM_018854 55978 Mm.358671 NM_018854 ENSMUSG00000001105 Ift20 0610009H04Rik|AU015496|mIFT20 intraflagellar transport 20 protein-coding common_peak1_89_54_0.422953454328679_5.992836440689_0.982403616259003 chr6 30308123 30309390 + 0.982403616259003 NA Intergenic Intergenic -4217 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_65_74_-0.468807685671366_5.9944148476602_0.982403616259003-3 chr6 121101396 121102634 + 0.982403616259003 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -20388 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak2_89_54_0.422953454328679_5.992836440689_0.982403616259003 chr4 57955156 57956204 + 0.982403616259003 NA intron (NM_011660, intron 1 of 4) CpG 731 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak2_147_95_0.331888281189798_6.75090664131606_0.982271121213805 chr2 13370863 13372127 + 0.982271121213805 NA intron (NM_001081084, intron 31 of 66) intron (NM_001081084, intron 31 of 66) -100080 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak2_245_237_-0.250077573053296_7.7697789767813_0.982107281940257 chr10 80150070 80153004 + 0.982107281940257 NA intron (NM_001347117, intron 3 of 7) intron (NM_001347117, intron 3 of 7) 1855 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_207_138_0.285432163011873_7.26165715422944_0.981924396091499 chr15 89179216 89180710 + 0.981924396091499 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 825 NM_001284506 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_73_43_0.464474142846901_5.69166869006075_0.980945783223891 chr11 60352141 60352765 + 0.980945783223891 NA promoter-TSS (NM_029044) promoter-TSS (NM_029044) 452 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding common_peak1_73_43_0.464474142846901_5.69166869006075_0.980945783223891-4 chr8 85431952 85432769 + 0.980945783223891 NA intron (NM_025722, intron 1 of 3) CpG 481 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding common_peak2_73_43_0.464474142846901_5.69166869006075_0.980945783223891 chr11 61854294 61854912 + 0.980945783223891 NA 5' UTR (NM_013881, exon 1 of 27) 5' UTR (NM_013881, exon 1 of 27) 489 NM_013881 29869 Mm.162025 NM_013881 ENSMUSG00000004798 Ulk2 A830085I22Rik|AU015340|Unc51.2|mKIAA0623 unc-51 like kinase 2 protein-coding common_peak1_73_43_0.464474142846901_5.69166869006075_0.980945783223891-2 chr18 34372642 34373375 + 0.980945783223891 NA intron (NM_007874, intron 1 of 4) CpG 407 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_73_43_0.464474142846901_5.69166869006075_0.980945783223891-3 chr5 103777575 103778613 + 0.980945783223891 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 23521 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_51_61_-0.535713115505006_5.68633975263437_0.980945783223878 chr17 24162768 24163714 + 0.980945783223878 NA TTS (NM_001361535) TTS (NM_001361535) 492 NM_172935 245847 Mm.87319 NM_172935 ENSMUSG00000036820 Amdhd2 5730457F11Rik amidohydrolase domain containing 2 protein-coding common_peak1_274_263_-0.240014878400126_7.92438668015839_0.979951732154799 chr16 33575696 33578390 + 0.979951732154799 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 58448 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak1_588_423_0.167542536170448_8.81169172264842_0.979918124008195 chr8 68117868 68122696 + 0.979918124008195 NA Intergenic Intergenic -145708 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-2 chr12 33187669 33187890 + 0.97990265578305 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 40093 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-8 chr2 137417709 137417919 + 0.97990265578305 NA Intergenic Intergenic -301294 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-9 chr2 151975509 151975729 + 0.97990265578305 NA intron (NM_146127, intron 1 of 1) L2c|LINE|L2 -1638 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-9 chr2 181505230 181505468 + 0.97990265578305 NA intron (NM_025482, intron 4 of 7) URR1A|DNA|hAT-Charlie 8207 NM_001291204 66314 Mm.136648 NM_025482 ENSMUSG00000000827 Tpd52l2 2810411G23Rik|AU016537|C86069|D54 tumor protein D52-like 2 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305 chr1 34239616 34239885 + 0.97990265578305 NA intron (NM_001276764, intron 60 of 102) intron (NM_001276764, intron 60 of 102) 79420 NM_010081 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-17 chr6 125330587 125330848 + 0.97990265578305 NA intron (NM_011324, intron 1 of 11) intron (NM_011324, intron 1 of 11) 9377 NM_011324 20276 Mm.144114 NM_011324 ENSMUSG00000030340 Scnn1a ENaC|SCNEA|Scnn1|mENaC sodium channel, nonvoltage-gated 1 alpha protein-coding unique_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-2 chr2 32258992 32259202 + 0.97990265578305 NA intron (NM_011675, intron 2 of 6) intron (NM_011675, intron 2 of 6) 1008 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-18 chr6 76708147 76708356 + 0.97990265578305 NA Intergenic Intergenic -534226 NR_155299 74342 Mm.292568 NM_028880 ENSMUSG00000060780 Lrrtm1 4632401D06Rik|AW125451 leucine rich repeat transmembrane neuronal 1 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-8 chr17 84100846 84101036 + 0.97990265578305 NA Intergenic Intergenic 22281 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-11 chr6 89422208 89422465 + 0.97990265578305 NA intron (NM_001167736, intron 4 of 6) intron (NM_001167736, intron 4 of 6) -59723 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-5 chr14 101803427 101803664 + 0.97990265578305 NA intron (NM_201529, intron 2 of 30) AT_rich|Low_complexity|Low_complexity -37078 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-9 chr8 34297651 34297881 + 0.97990265578305 NA Intergenic Intergenic -131054 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-10 chr7 15962335 15962565 + 0.97990265578305 NA intron (NM_153068, intron 3 of 5) intron (NM_153068, intron 3 of 5) 5085 NM_153068 259300 Mm.138215 NM_153068 ENSMUSG00000074364 Ehd2 BC027084|C130052H20Rik EH-domain containing 2 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-18 chr7 66335754 66335968 + 0.97990265578305 NA intron (NM_146191, intron 3 of 33) intron (NM_146191, intron 3 of 33) 45863 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-5 chr10 86323763 86323990 + 0.97990265578305 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 23464 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-5 chr11 3301023 3301235 + 0.97990265578305 NA intron (NM_019574, intron 3 of 3) intron (NM_019574, intron 3 of 3) -7871 NR_045708 100302648 Mm.458664 NR_045708 ENSMUSG00000084941 Gm11944 - predicted gene 11944 ncRNA unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-14 chr7 116204145 116204403 + 0.97990265578305 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -5713 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-3 chr14 18462172 18462377 + 0.97990265578305 NA Intergenic Tigger5b|DNA|TcMar-Tigger -130430 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-3 chr13 63311832 63312034 + 0.97990265578305 NA 3' UTR (NM_001347514, exon 16 of 16) 3' UTR (NM_001347514, exon 16 of 16) -10650 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-9 chr2 113396016 113396219 + 0.97990265578305 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) -44947 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-5 chr9 47575365 47575603 + 0.97990265578305 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 45132 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-16 chr6 116695550 116695749 + 0.97990265578305 NA intron (NM_178768, intron 4 of 4) intron (NM_178768, intron 4 of 4) 21109 NM_178768 319776 Mm.133120 NM_178768 ENSMUSG00000048108 Tmem72 C230095G01Rik transmembrane protein 72 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-17 chr6 72617473 72617684 + 0.97990265578305 NA promoter-TSS (NM_009444) promoter-TSS (NM_009444) -578 NM_009443 22134 Mm.246563 NM_009443 ENSMUSG00000056429 Tgoln1 AU015504|D6Ertd384e|TGN38|TGN38A|Ttgn1 trans-golgi network protein protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-4 chr14 17902802 17902990 + 0.97990265578305 NA intron (NM_001113417, intron 2 of 9) intron (NM_001113417, intron 2 of 9) -78748 NM_009380 21834 Mm.32563 NM_009380 ENSMUSG00000021779 Thrb Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta thyroid hormone receptor beta protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-8 chr6 17109793 17110000 + 0.97990265578305 NA intron (NR_153844, intron 1 of 2) intron (NR_153844, intron 1 of 2) 44747 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305 chr17 70737316 70737556 + 0.97990265578305 NA intron (NM_001347411, intron 9 of 14) B1F|SINE|Alu 109341 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-10 chr4 41260934 41261138 + 0.97990265578305 NA intron (NM_026872, intron 1 of 28) intron (NM_026872, intron 1 of 28) 14099 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305 chr12 84846353 84846555 + 0.97990265578305 NA intron (NM_013589, intron 3 of 34) Tigger7|DNA|TcMar-Tigger -29348 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-10 chr2 160223549 160223801 + 0.97990265578305 NA Intergenic RMER15|LTR|ERVL 103819 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-10 chrX 8238666 8238891 + 0.97990265578305 NA 3' UTR (NM_001290430, exon 13 of 13) 3' UTR (NM_001290430, exon 13 of 13) 13628 NM_133991 54632 Mm.327529 NM_133991 ENSMUSG00000031171 Ftsj1 AI931847|Ftsj|Ftsjl|Sfc12 FtsJ RNA methyltransferase homolog 1 (E. coli) protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-7 chr2 125359521 125359716 + 0.97990265578305 NA intron (NM_007993, intron 31 of 65) intron (NM_007993, intron 31 of 65) 112103 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-6 chr16 26081787 26082031 + 0.97990265578305 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 23875 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-8 chr2 92024159 92024419 + 0.97990265578305 NA promoter-TSS (NM_011957) promoter-TSS (NM_011957) -119 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305 chr11 53775059 53775266 + 0.97990265578305 NA intron (NM_001159393, intron 8 of 9) intron (NM_001159393, intron 8 of 9) 4689 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-2 chr1 71971923 71972141 + 0.97990265578305 NA intron (NR_040454, intron 1 of 2) intron (NR_040454, intron 1 of 2) 33163 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-10 chr6 116408079 116408291 + 0.97990265578305 NA 3' UTR (NM_001302383, exon 8 of 8) 3' UTR (NM_001302383, exon 8 of 8) 52993 NM_009662 11689 Mm.41072 NM_009662 ENSMUSG00000025701 Alox5 5-LO|5-LOX|5LO|5LX|AI850497|F730011J02 arachidonate 5-lipoxygenase protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-6 chr18 75451314 75451557 + 0.97990265578305 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -63210 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-16 chr5 151202632 151202912 + 0.97990265578305 NA Intergenic Intergenic -12579 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305 chr11 86961694 86961893 + 0.97990265578305 NA intron (NM_001005341, intron 2 of 4) MER58A|DNA|hAT-Charlie 31969 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-8 chr16 30968734 30968948 + 0.97990265578305 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 112591 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305 chr11 72474476 72474692 + 0.97990265578305 NA intron (NM_153060, intron 2 of 12) intron (NM_153060, intron 2 of 12) 443 NM_001276383 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-9 chr4 33338222 33338416 + 0.97990265578305 NA intron (NM_001305273, intron 7 of 15) intron (NM_001305273, intron 7 of 15) 28008 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-15 chr8 123761559 123761823 + 0.97990265578305 NA Intergenic Intergenic 27733 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-7 chr16 58413464 58413673 + 0.97990265578305 NA intron (NM_001356484, intron 1 of 15) intron (NM_001356484, intron 1 of 15) 5033 NM_028523 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-13 chr5 91567816 91568025 + 0.97990265578305 NA intron (NM_145562, intron 1 of 3) GA-rich|Low_complexity|Low_complexity 50220 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-7 chr6 146947672 146947880 + 0.97990265578305 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) 6645 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-9 chr6 92551163 92551400 + 0.97990265578305 NA intron (NM_001081146, intron 2 of 8) C-rich|Low_complexity|Low_complexity 16085 NM_001134461 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-19 chr8 64020988 64021197 + 0.97990265578305 NA intron (NM_009390, intron 19 of 20) intron (NM_009390, intron 19 of 20) -68922 NM_001195687 244495 Mm.485331 NM_001195687 ENSMUSG00000094443 Sgo2b EG244495|Gm4975|Sgol2b shugoshin 2B protein-coding common_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-2 chr4 136568296 136568505 + 0.97990265578305 NA intron (NM_001356567, intron 8 of 19) intron (NM_001356567, intron 8 of 19) 34323 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-3 chr14 121706361 121706561 + 0.97990265578305 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -8044 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-2 chr3 157535466 157535688 + 0.97990265578305 NA intron (NM_001355381, intron 1 of 8) intron (NM_001355381, intron 1 of 8) 1412 NM_001355386 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding unique_peak1_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-4 chr6 120038991 120039185 + 0.97990265578305 NA promoter-TSS (NM_001199083) promoter-TSS (NM_001199083) -433 NM_001185021 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-3 chr16 93189449 93189701 + 0.97990265578305 NA Intergenic Intergenic 163614 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-12 chr4 8691585 8691842 + 0.97990265578305 NA intron (NM_001277149, intron 1 of 37) CpG 1307 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-10 chr5 77387548 77387743 + 0.97990265578305 NA intron (NM_008048, intron 1 of 4) ORR1E|LTR|ERVL-MaLR 20400 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-7 chr2 4555617 4555844 + 0.97990265578305 NA intron (NM_001177843, intron 11 of 23) intron (NM_001177843, intron 11 of 23) -4024 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-7 chr15 81302104 81302292 + 0.97990265578305 NA Intergenic Intergenic -50336 NR_077230 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-5 chr14 54186006 54186221 + 0.97990265578305 NA Intergenic Intergenic 67816 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-6 chr9 66276590 66276826 + 0.97990265578305 NA Intergenic Intergenic -73742 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding unique_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-3 chr3 51484904 51485119 + 0.97990265578305 NA intron (NM_016858, intron 1 of 1) B1_Mur3|SINE|Alu 1045 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-6 chr15 58165592 58165844 + 0.97990265578305 NA Intergenic MTD|LTR|ERVL-MaLR 24352 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-13 chr6 135087104 135087464 + 0.97990265578305 NA Intergenic B2_Mm1t|SINE|B2 21622 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-13 chr5 32051723 32051996 + 0.97990265578305 NA intron (NM_144541, intron 10 of 11) B1F1|SINE|Alu -84613 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-11 chr5 107085921 107086145 + 0.97990265578305 NA Intergenic Intergenic 121472 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-6 chr15 53104752 53104999 + 0.97990265578305 NA intron (NM_010162, intron 3 of 10) B3|SINE|B2 241308 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-8 chr7 139187914 139188120 + 0.97990265578305 NA intron (NM_001162540, intron 1 of 11) CpG 477 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-3 chr5 105809517 105809708 + 0.97990265578305 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -66956 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-4 chr10 119875520 119875740 + 0.97990265578305 NA intron (NM_001358811, intron 1 of 23) intron (NM_001358811, intron 1 of 23) -23240 NR_131760 78105 Mm.399086 NR_131760 ENSMUSG00000085418 Grip1os1 4930404E01Rik|4930483C13Rik glutamate receptor interacting protein 1, opposite strand 1 ncRNA common_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305 chr12 50545682 50545882 + 0.97990265578305 NA intron (NM_008858, intron 1 of 18) intron (NM_008858, intron 1 of 18) 103441 NM_008858 18760 Mm.133719 NM_008858 ENSMUSG00000002688 Prkd1 PKD|PKD1|Pkcm|Prkcm protein kinase D1 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-12 chr9 42514611 42514836 + 0.97990265578305 NA Intergenic Intergenic -42465 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-15 chr5 144948256 144948458 + 0.97990265578305 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 17473 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-4 chr13 114859529 114859735 + 0.97990265578305 NA exon (NM_008396, exon 17 of 30) exon (NM_008396, exon 17 of 30) 41395 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-2 chr13 102573728 102573927 + 0.97990265578305 NA Intergenic Intergenic -119720 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305 chr1 82634167 82634369 + 0.97990265578305 NA intron (NM_007734, intron 1 of 51) AT_rich|Low_complexity|Low_complexity 47347 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305 chr10 75559605 75559836 + 0.97990265578305 NA intron (NM_198860, intron 1 of 3) intron (NM_198860, intron 1 of 3) 610 NM_198860 192734 Mm.259320 NM_198860 ENSMUSG00000046807 Lrrc75b AI646023|Fam211b leucine rich repeat containing 75B protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-8 chr3 122056082 122056280 + 0.97990265578305 NA intron (NM_007378, intron 4 of 49) intron (NM_007378, intron 4 of 49) 11721 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-10 chr3 101108086 101108289 + 0.97990265578305 NA intron (NM_011197, intron 1 of 8) intron (NM_011197, intron 1 of 8) 1979 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305 chr10 96630661 96630920 + 0.97990265578305 NA Intergenic Intergenic 13789 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-5 chr17 36043773 36043976 + 0.97990265578305 NA intron (NM_001034909, intron 1 of 2) intron (NM_001034909, intron 1 of 2) 913 NM_001034909 547347 Mm.484641 NM_001034909 ENSMUSG00000073407 Gm6034 EG547347|H2-gs14-2 predicted gene 6034 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-7 chr3 159031294 159031514 + 0.97990265578305 NA Intergenic C-rich|Low_complexity|Low_complexity -44960 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-9 chr9 49926940 49927248 + 0.97990265578305 NA Intergenic IMPB_01|Satellite|Satellite -127701 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-11 chr4 136286822 136287022 + 0.97990265578305 NA intron (NM_001356308, intron 2 of 3) intron (NM_001356308, intron 2 of 3) 855 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-5 chr14 50898203 50898427 + 0.97990265578305 NA Intergenic Intergenic -5060 NM_001166651 546611 Mm.390692 NM_001166651 ENSMUSG00000090799 Klhl33 EG546611 kelch-like 33 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-11 chr8 24397324 24397546 + 0.97990265578305 NA Intergenic Intergenic 41511 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-14 chr5 138135603 138135802 + 0.97990265578305 NA Intergenic B1_Mus2|SINE|Alu 18797 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding unique_peak1_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-2 chr12 79558822 79559069 + 0.97990265578305 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 261594 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-3 chr3 102574176 102574364 + 0.97990265578305 NA Intergenic Intergenic 104351 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-3 chr13 53088029 53088228 + 0.97990265578305 NA Intergenic Intergenic -107089 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-9 chr5 135881399 135881669 + 0.97990265578305 NA Intergenic Intergenic -6385 NM_013560 15507 Mm.13849 NM_013560 ENSMUSG00000004951 Hspb1 27kDa|Hsp25 heat shock protein 1 protein-coding unique_peak1_6_7_-0.454190947061586_2.77290452646921_0.97990265578305 chr10 16577588 16577783 + 0.97990265578305 NA Intergenic Intergenic 518097 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-3 chr12 27391553 27391774 + 0.97990265578305 NA Intergenic Intergenic -48945 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-12 chr6 92427410 92427632 + 0.97990265578305 NA intron (NM_001134461, intron 2 of 7) intron (NM_001134461, intron 2 of 7) 53871 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-11 chr3 152347421 152347636 + 0.97990265578305 NA intron (NM_001355666, intron 1 of 21) (CAAG)n|Simple_repeat|Simple_repeat 1050 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-7 chr15 97695872 97696088 + 0.97990265578305 NA intron (NM_028003, intron 5 of 16) intron (NM_028003, intron 5 of 16) 9842 NM_028003 71919 Mm.12255 NM_028003 ENSMUSG00000022466 Rpap3 2310042P20Rik|D15Ertd682e RNA polymerase II associated protein 3 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-20 chr8 84207915 84208170 + 0.97990265578305 NA promoter-TSS (NR_029741) promoter-TSS (NR_029741) -476 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305 chr9 99130632 99130845 + 0.97990265578305 NA intron (NM_029094, intron 1 of 23) MIR|SINE|MIR 9473 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-2 chr13 29986817 29987007 + 0.97990265578305 NA promoter-TSS (NM_010093) promoter-TSS (NM_010093) -849 NM_010093 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-13 chr5 113280352 113280544 + 0.97990265578305 NA exon (NM_001309528, exon 1 of 16) exon (NM_001309528, exon 1 of 16) 153 NM_001309528 52850 Mm.200203 NM_172718 ENSMUSG00000042216 Sgsm1 2410098H20Rik|AA408781|D5Bwg1524e|E130107M15|NuIP|Rutbc2 small G protein signaling modulator 1 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-2 chr15 11869538 11869787 + 0.97990265578305 NA intron (NM_001039181, intron 3 of 7) intron (NM_001039181, intron 3 of 7) 36012 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-4 chr18 36498106 36498312 + 0.97990265578305 NA Intergenic Intergenic 17596 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-4 chr6 136901056 136901300 + 0.97990265578305 NA Intergenic Intergenic 21002 NM_026983 69187 Mm.33692 NM_026983 ENSMUSG00000030219 Erp27 1810033M07Rik|1810047B09Rik endoplasmic reticulum protein 27 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-2 chr10 12880767 12880966 + 0.97990265578305 NA Intergenic URR1B|DNA|hAT-Charlie -19131 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-6 chr15 27953722 27953956 + 0.97990265578305 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 72009 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak2_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305 chr10 78070047 78070257 + 0.97990265578305 NA intron (NM_015790, intron 1 of 6) intron (NM_015790, intron 1 of 6) 784 NM_015790 50723 Mm.17819 NM_015790 ENSMUSG00000000732 Icosl AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653 icos ligand protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-6 chr14 25519208 25519437 + 0.97990265578305 NA intron (NM_183208, intron 2 of 23) B1_Mm|SINE|Alu -15117 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-4 chr14 48223834 48224041 + 0.97990265578305 NA intron (NR_003630, intron 2 of 2) B4A|SINE|B4 25221 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-2 chr12 8395337 8395538 + 0.97990265578305 NA Intergenic X6A_LINE|LINE|CR1 82004 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-2 chr1 184056630 184056823 + 0.97990265578305 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 22345 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305 chr11 69443742 69443975 + 0.97990265578305 NA intron (NM_001081330, intron 63 of 85) intron (NM_001081330, intron 63 of 85) -30183 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-12 chr5 111151893 111152091 + 0.97990265578305 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) 147848 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-15 chr5 122900654 122900852 + 0.97990265578305 NA promoter-TSS (NM_013910) promoter-TSS (NM_013910) -403 NM_013910 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305 chr1 77463026 77463251 + 0.97990265578305 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 33630 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-21 chr8 124254212 124254477 + 0.97990265578305 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 22950 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-5 chr14 21833154 21833398 + 0.97990265578305 NA intron (NM_011695, intron 3 of 9) B1_Mus1|SINE|Alu 1715 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-3 chr10 80757314 80757508 + 0.97990265578305 NA intron (NM_199322, intron 1 of 27) B1F1|SINE|Alu 2208 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-5 chr18 63830994 63831209 + 0.97990265578305 NA intron (NM_001014981, intron 20 of 27) intron (NM_001014981, intron 20 of 27) 122406 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding unique_peak2_6_7_-0.454190947061586_2.77290452646921_0.97990265578305-4 chr13 97578645 97578905 + 0.97990265578305 NA intron (NR_046157, intron 2 of 2) intron (NR_046157, intron 2 of 2) 18775 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-8 chr2 30364947 30365170 + 0.97990265578305 NA intron (NM_175392, intron 1 of 15) intron (NM_175392, intron 1 of 15) 723 NM_175392 108958 Mm.254974 NM_175392 ENSMUSG00000026858 Miga2 5730472N09Rik|AA408683|AI790341|C9orf54|Fam73b|R74766 mitoguardin 2 protein-coding unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-14 chr8 31575962 31576172 + 0.97990265578305 NA Intergenic Intergenic 208318 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-12 chr4 145273487 145273687 + 0.97990265578305 NA intron (NM_009401, intron 12 of 12) URR1B|DNA|hAT-Charlie -26717 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-14 chr5 100498258 100498475 + 0.97990265578305 NA 5' UTR (NM_001115010, exon 1 of 13) 5' UTR (NM_001115010, exon 1 of 13) 207 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding unique_peak2_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-6 chr3 69199918 69200165 + 0.97990265578305 NA Intergenic Intergenic -22378 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding unique_peak1_7_6_-0.0702598982665639_2.77222497292432_0.97990265578305-6 chr16 15684307 15684567 + 0.97990265578305 NA intron (NM_011159, intron 22 of 85) intron (NM_011159, intron 22 of 85) 46571 NM_011159 19090 Mm.71 NM_011159 ENSMUSG00000022672 Prkdc AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip protein kinase, DNA activated, catalytic polypeptide protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-3 chr1 193544025 193544282 + 0.97990265578305 NA Intergenic Intergenic -36623 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak2_8_6_0.0984662857615892_2.8565880649384_0.97990265578305 chr1 13930963 13931256 + 0.97990265578305 NA Intergenic Intergenic -144180 NR_004447 433273 Mm.304088 NR_004447 ENSMUSG00000097711 Gm5523 EG433273 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-11 chr7 105622431 105622674 + 0.97990265578305 NA intron (NM_001360425, intron 2 of 11) L2|LINE|L2 11019 NM_018880 55992 Mm.29290 NM_018880 ENSMUSG00000036989 Trim3 BERP1|HAC1|Rnf22 tripartite motif-containing 3 protein-coding unique_peak1_7_7_-0.26290497620896_2.86854751189552_0.97990265578305-4 chr16 25486081 25486302 + 0.97990265578305 NA Intergenic B1_Mm|SINE|Alu -197574 NM_001127259 22061 Mm.20894 NM_011641 ENSMUSG00000022510 Trp63 AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1 transformation related protein 63 protein-coding unique_peak1_8_6_0.0984662857615892_2.8565880649384_0.97990265578305-4 chr10 4274795 4275093 + 0.97990265578305 NA intron (NM_031185, intron 1 of 3) B1_Mur4|SINE|Alu 8615 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-7 chr17 65775792 65776010 + 0.97990265578305 NA Intergenic Intergenic -3149 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding unique_peak1_8_7_-0.0941787921808066_2.9529106039096_0.97990265578305-19 chr7 72509957 72510178 + 0.97990265578305 NA Intergenic Intergenic -203472 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_45_55_-0.564501620261349_5.52510411192693_0.979629970520458 chr11 98400206 98400828 + 0.979629970520458 NA promoter-TSS (NM_001033537) promoter-TSS (NM_001033537) -27 NM_001033537 320655 Mm.86519 NM_001033537 ENSMUSG00000038208 Pgap3 CAB2|D430035D22Rik|Perld1 post-GPI attachment to proteins 3 protein-coding common_peak2_45_55_-0.564501620261349_5.52510411192693_0.979629970520458-2 chr2 120730678 120731274 + 0.979629970520458 NA exon (NM_026891, exon 2 of 28) exon (NM_026891, exon 2 of 28) 541 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding common_peak1_66_38_0.496150798778139_5.53347761825132_0.979629970520458 chr18 42275337 42275985 + 0.979629970520458 NA promoter-TSS (NR_033452) promoter-TSS (NR_033452) 308 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding unique_peak2_45_55_-0.564501620261349_5.52510411192693_0.979629970520458 chr10 80621421 80622380 + 0.979629970520458 NA promoter-TSS (NM_134002) promoter-TSS (NM_134002) -880 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak2_45_55_-0.564501620261349_5.52510411192693_0.979629970520458-3 chr2 121600307 121601135 + 0.979629970520458 NA intron (NM_001360084, intron 1 of 13) intron (NM_001360084, intron 1 of 13) 93998 NM_001290986 241627 Mm.293284 NM_030234 ENSMUSG00000027242 Wdr76 5830411K18Rik|6030457D09|AA517836 WD repeat domain 76 protein-coding common_peak2_45_55_-0.564501620261349_5.52510411192693_0.979629970520458-4 chr9 72132914 72133608 + 0.979629970520458 NA Intergenic CpG -21442 NM_011544 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_45_55_-0.564501620261349_5.52510411192693_0.979629970520458 chr8 84975051 84975589 + 0.979629970520458 NA TTS (NM_011563) TTS (NM_011563) 3428 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_66_38_0.496150798778139_5.53347761825132_0.979629970520458-2 chr3 90231658 90232246 + 0.979629970520458 NA 5' UTR (NM_206924, exon 1 of 5) 5' UTR (NM_206924, exon 1 of 5) 355 NM_206924 23922 Mm.13912 NM_206924 ENSMUSG00000027937 Jtb Gm622 jumping translocation breakpoint protein-coding common_peak1_193_191_-0.280406925883322_7.44475903777949_0.979617356754386 chr8 84978876 84979985 + 0.979617356754386 NA promoter-TSS (NM_008416) promoter-TSS (NM_008416) -682 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_234_158_0.266325287625088_7.4460455990969_0.979617356754386 chr3 102363336 102365544 + 0.979617356754386 NA Intergenic Intergenic 102035 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA common_peak2_356_249_0.21243126532946_8.07199991732682_0.97891004043311 chr15 102998847 103001350 + 0.97891004043311 NA Intergenic Intergenic -9464 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding common_peak2_233_226_-0.25344906752738_7.69982395352723_0.978374079505344 chr18 14681847 14683414 + 0.978374079505344 NA intron (NM_009280, intron 1 of 10) CpG 284 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak2_171_112_0.311953608647756_6.97615576673907_0.977996160051693 chr8 105346313 105347807 + 0.977996160051693 NA intron (NM_177699, intron 1 of 21) intron (NM_177699, intron 1 of 21) 910 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak1_136_140_-0.333335778283014_6.97288346325729_0.977996160051693 chr4 83302397 83304038 + 0.977996160051693 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 20972 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_169_170_-0.302474717942056_7.26661515591487_0.977502383186058 chr13 100650384 100652108 + 0.977502383186058 NA promoter-TSS (NM_001283011) promoter-TSS (NM_001283011) -97 NM_027139 108143 Mm.301148 NM_027139 ENSMUSG00000052293 Taf9 2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g TATA-box binding protein associated factor 9 protein-coding common_peak1_108_67_0.391232043878107_6.28307886318939_0.976994348301596 chr8 61589586 61590377 + 0.976994348301596 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 1188 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_81_89_-0.420893528729237_6.28140633196506_0.976994348301596-2 chr4 95052580 95053217 + 0.976994348301596 NA promoter-TSS (NM_010591) promoter-TSS (NM_010591) -676 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_108_67_0.391232043878107_6.28307886318939_0.976994348301596-2 chr8 81866101 81866896 + 0.976994348301596 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 523936 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_81_89_-0.420893528729237_6.28140633196506_0.976994348301596 chr11 89187196 89187970 + 0.976994348301596 NA Intergenic Intergenic 113742 NM_001033266 217071 Mm.342127 NM_001033266 ENSMUSG00000072553 Gm525 - predicted gene 525 protein-coding common_peak2_147_150_-0.321553957414125_7.07762776061802_0.976199660281578 chr6 38550600 38552426 + 0.976199660281578 NA 5' UTR (NM_138680, exon 1 of 10) 5' UTR (NM_138680, exon 1 of 10) 179 NM_001170849 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak1_148_96_0.326584554338138_6.7632051193562_0.975991158725859 chr15 81744821 81746398 + 0.975991158725859 NA intron (NM_001081016, intron 1 of 22) intron (NM_001081016, intron 1 of 22) 761 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding common_peak2_117_122_-0.350168399589805_6.76743030554434_0.975991158725859 chr1 43235364 43237348 + 0.975991158725859 NA Intergenic Intergenic -39595 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_116_122_-0.362360106002462_6.76133445233801_0.975991158725859-3 chr2 84648367 84650555 + 0.975991158725859 NA promoter-TSS (NM_001355065) promoter-TSS (NM_001355065) 19 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak2_116_122_-0.362360106002462_6.76133445233801_0.975991158725859 chr10 91180595 91182545 + 0.975991158725859 NA Intergenic CpG -9951 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_116_122_-0.362360106002462_6.76133445233801_0.975991158725859-2 chr14 34673474 34674816 + 0.975991158725859 NA 5' UTR (NM_001301330, exon 1 of 19) 5' UTR (NM_001301330, exon 1 of 19) 217 NM_001301330 218914 Mm.27957 NM_001004436 ENSMUSG00000041408 Wapl A530089A20Rik|BC037674|DIF-2|FOE|Wapal WAPL cohesin release factor protein-coding common_peak2_235_159_0.263363031288828_7.45360961053178_0.975739272250412 chr3 87156509 87158011 + 0.975739272250412 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 17487 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_98_105_-0.38707384751123_6.53438353080758_0.975364496146146 chr2 32914037 32915548 + 0.975364496146146 NA intron (NM_146119, intron 5 of 13) intron (NM_146119, intron 5 of 13) 38658 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_98_105_-0.38707384751123_6.53438353080758_0.975364496146146-2 chr5 21786322 21787371 + 0.975364496146146 NA exon (NM_011188, exon 2 of 13) exon (NM_011188, exon 2 of 13) 1563 NM_011188 19181 Mm.2462 NM_011188 ENSMUSG00000028932 Psmc2 - proteasome (prosome, macropain) 26S subunit, ATPase 2 protein-coding common_peak1_98_105_-0.38707384751123_6.53438353080758_0.975364496146146 chr6 124740407 124741870 + 0.975364496146146 NA promoter-TSS (NM_013535) promoter-TSS (NM_013535) -59 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak1_53_29_0.565656255291641_5.18971872325434_0.975110594803311-3 chr9 110748148 110748643 + 0.975110594803311 NA Intergenic Intergenic -1250 NM_011199 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding common_peak1_52_29_0.538879459661342_5.17633032543919_0.975110594803311-3 chr3 50002015 50002449 + 0.975110594803311 NA Intergenic Intergenic -244916 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak2_53_29_0.565656255291641_5.18971872325434_0.975110594803311-2 chr19 4755887 4756382 + 0.975110594803311 NA promoter-TSS (NM_025717) promoter-TSS (NM_025717) -391 NM_025717 66704 Mm.396734 NM_025717 ENSMUSG00000033760 Rbm4b 4921506I22Rik|AI504630|AI506404|Lark2|Neosin RNA binding motif protein 4B protein-coding common_peak1_34_44_-0.640497103783871_5.17160454443774_0.975110594803311-3 chr13 100491892 100492522 + 0.975110594803311 NA intron (NM_001360706, intron 1 of 16) CpG 187 NR_153794 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding common_peak1_52_29_0.538879459661342_5.17633032543919_0.975110594803311-4 chr7 19228953 19229573 + 0.975110594803311 NA intron (NM_207525, intron 1 of 1) intron (NM_207525, intron 1 of 1) 874 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak1_34_44_-0.640497103783871_5.17160454443774_0.975110594803311-4 chr15 80977781 80978227 + 0.975110594803311 NA intron (NM_001357669, intron 1 of 20) CpG 239 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding common_peak2_34_44_-0.640497103783871_5.17160454443774_0.975110594803311 chr2 58567155 58567731 + 0.975110594803311 NA promoter-TSS (NM_001110205) promoter-TSS (NM_001110205) 109 NM_001289660 76654 Mm.200370 NM_029692 ENSMUSG00000026839 Upp2 1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding common_peak1_53_29_0.565656255291641_5.18971872325434_0.975110594803311-2 chr9 65010285 65010731 + 0.975110594803311 NA exon (NM_021345, exon 2 of 11) exon (NM_021345, exon 2 of 11) 11209 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_52_29_0.538879459661342_5.17633032543919_0.975110594803311-2 chr13 63154397 63154845 + 0.975110594803311 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) -85408 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_53_29_0.565656255291641_5.18971872325434_0.975110594803311-3 chr2 167949798 167950450 + 0.975110594803311 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 17797 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_53_29_0.565656255291641_5.18971872325434_0.975110594803311 chr1 132322688 132323127 + 0.975110594803311 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 6782 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_34_44_-0.640497103783871_5.17160454443774_0.975110594803311-2 chr13 98693261 98693656 + 0.975110594803311 NA intron (NM_001025606, intron 1 of 3) intron (NM_001025606, intron 1 of 3) 1373 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_52_29_0.538879459661342_5.17633032543919_0.975110594803311 chr2 6256213 6256919 + 0.975110594803311 NA intron (NR_040333, intron 3 of 6) intron (NR_040333, intron 3 of 6) -43572 NM_024208 67856 Mm.38342 NM_024208 ENSMUSG00000039063 Echdc3 2310005D12Rik|AI662097 enoyl Coenzyme A hydratase domain containing 3 protein-coding common_peak1_34_44_-0.640497103783871_5.17160454443774_0.975110594803311 chr1 72583376 72583979 + 0.975110594803311 NA intron (NM_018817, intron 1 of 16) intron (NM_018817, intron 1 of 16) 426 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding common_peak1_53_29_0.565656255291641_5.18971872325434_0.975110594803311 chr9 22156810 22157543 + 0.975110594803311 NA intron (NM_001082532, intron 1 of 1) CpG 330 NM_001082532 66268 Mm.28924 NM_025457 ENSMUSG00000010607 Pigyl 1810008A14Rik|PIG-Y|Pigy phosphatidylinositol glycan anchor biosynthesis, class Y-like protein-coding common_peak1_52_29_0.538879459661342_5.17633032543919_0.975110594803311 chr12 69457731 69458342 + 0.975110594803311 NA Intergenic Intergenic 17514 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_89_97_-0.410396676261869_6.40951150598427_0.974829861064463 chr8 121829087 121830111 + 0.974829861064463 NA promoter-TSS (NM_145605) promoter-TSS (NM_145605) -30 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak2_118_74_0.375616236841458_6.41662680891661_0.974829861064463 chr8 120667105 120668063 + 0.974829861064463 NA promoter-TSS (NM_001293559) promoter-TSS (NM_001293559) 528 NM_010926 18117 Mm.2136 NM_010926 ENSMUSG00000031819 Emc8 Cox4nb|Fam158b|Noc4 ER membrane protein complex subunit 8 protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-9 chr6 4489895 4490576 + 0.974620203848502 NA Intergenic Intergenic -15383 NM_007743 12843 Mm.277792 NM_007743 ENSMUSG00000029661 Col1a2 AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim collagen, type I, alpha 2 protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-13 chrX 102119534 102120198 + 0.974620203848502 NA intron (NM_027181, intron 1 of 3) intron (NM_027181, intron 1 of 3) 401 NM_027181 69713 Mm.371635 NM_027181 ENSMUSG00000079480 Pin4 2410002I22Rik|EPVH|Par14 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502 chr1 91064032 91064627 + 0.974620203848502 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 10885 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_40_21_0.618582928536385_4.76872308290549_0.974620203848502-2 chr2 152816453 152816861 + 0.974620203848502 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 11832 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-3 chr15 73435297 73435662 + 0.974620203848502 NA Intergenic Intergenic -12288 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-12 chr7 109613783 109614331 + 0.974620203848502 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 2511 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502 chr1 52817168 52817886 + 0.974620203848502 NA 5' UTR (NM_008384, exon 1 of 6) 5' UTR (NM_008384, exon 1 of 6) 161 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-6 chr17 35820962 35821434 + 0.974620203848502 NA promoter-TSS (NM_133662) promoter-TSS (NM_133662) -515 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-4 chr5 114927120 114927710 + 0.974620203848502 NA intron (NM_001359946, intron 1 of 4) intron (NM_001359946, intron 1 of 4) 4175 NM_001359945 231655 Mm.95479 NM_145209 ENSMUSG00000041827 Oasl1 7530414C13Rik|oasl9 2'-5' oligoadenylate synthetase-like 1 protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-6 chr8 86863247 86863733 + 0.974620203848502 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 21768 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_24_34_-0.759929175219415_4.74931842933526_0.974620203848502 chr1 193414592 193415088 + 0.974620203848502 NA Intergenic Intergenic -44558 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-2 chr15 41447561 41447887 + 0.974620203848502 NA intron (NR_152565, intron 1 of 17) CpG 242 NM_001358978 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-6 chr7 70331401 70331987 + 0.974620203848502 NA intron (NR_131144, intron 1 of 3) CpG 6128 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-11 chr7 27257484 27257979 + 0.974620203848502 NA 3' UTR (NM_133770, exon 15 of 15) 3' UTR (NM_133770, exon 15 of 15) -1030 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-3 chr12 111352765 111353421 + 0.974620203848502 NA intron (NM_183016, intron 1 of 36) intron (NM_183016, intron 1 of 36) 24625 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding unique_peak2_40_21_0.618582928536385_4.76872308290549_0.974620203848502 chr1 74027817 74028508 + 0.974620203848502 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 96285 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_40_21_0.618582928536385_4.76872308290549_0.974620203848502 chr10 121626139 121626450 + 0.974620203848502 NA promoter-TSS (NM_001081056) promoter-TSS (NM_001081056) 38 NM_001081056 73192 Mm.25042 NM_001081056 ENSMUSG00000034667 Xpot 1110004L07Rik|3110065H13Rik|AI452076|C79645|EXPORTIN-T exportin, tRNA (nuclear export receptor for tRNAs) protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-4 chr16 35022599 35023255 + 0.974620203848502 NA intron (NM_023587, intron 1 of 6) CpG 506 NM_023587 70757 Mm.27286 NM_023587 ENSMUSG00000035376 Hacd2 6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb 3-hydroxyacyl-CoA dehydratase 2 protein-coding unique_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502 chr12 76552593 76552917 + 0.974620203848502 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -4830 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-3 chr14 101798330 101799052 + 0.974620203848502 NA intron (NM_201529, intron 2 of 30) intron (NM_201529, intron 2 of 30) -41932 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_25_34_-0.703744842489853_4.77741059570004_0.974620203848502-2 chr8 24418107 24418702 + 0.974620203848502 NA Intergenic Intergenic 20542 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_25_34_-0.703744842489853_4.77741059570004_0.974620203848502-3 chr6 124415247 124415526 + 0.974620203848502 NA promoter-TSS (NM_001277330) promoter-TSS (NM_001277330) -319 NM_175933 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1-BP|PTS1R|PXR1P|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding common_peak1_25_34_-0.703744842489853_4.77741059570004_0.974620203848502-4 chrX 166661175 166661702 + 0.974620203848502 NA promoter-TSS (NR_046015) promoter-TSS (NR_046015) -587 NR_046015 382255 Mm.336320 NR_046015 ENSMUSG00000086860 Gm1720 - predicted gene 1720 ncRNA unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-5 chr7 66293462 66293857 + 0.974620203848502 NA intron (NM_146191, intron 15 of 33) intron (NM_146191, intron 15 of 33) 88065 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-8 chr3 151565909 151566668 + 0.974620203848502 NA Intergenic Intergenic 128406 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-2 chr11 115612689 115613235 + 0.974620203848502 NA promoter-TSS (NM_001243586) promoter-TSS (NM_001243586) 7 NM_001243584 69674 Mm.390387 NM_027162 ENSMUSG00000020743 Mif4gd 1110014L05Rik|2310075G12Rik MIF4G domain containing protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-5 chr17 15527473 15527926 + 0.974620203848502 NA promoter-TSS (NM_008799) promoter-TSS (NM_008799) -398 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding common_peak1_25_34_-0.703744842489853_4.77741059570004_0.974620203848502 chr15 96770641 96770960 + 0.974620203848502 NA Intergenic Intergenic -71072 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-7 chr8 124066790 124067279 + 0.974620203848502 NA Intergenic Intergenic 43561 NM_001029876 382038 Mm.334891 NM_001029876 ENSMUSG00000031976 Urb2 C77575|mKIAA0133 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-4 chr14 101804471 101804900 + 0.974620203848502 NA intron (NM_201529, intron 2 of 30) intron (NM_201529, intron 2 of 30) -35938 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-2 chr11 116012199 116012756 + 0.974620203848502 NA intron (NM_016905, intron 1 of 7) CpG 242 NM_016905 14635 Mm.2820 NM_016905 ENSMUSG00000020766 Galk1 AA409894|GALK|Gk|Glk|Glk1 galactokinase 1 protein-coding unique_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-7 chr9 49920500 49921149 + 0.974620203848502 NA Intergenic Intergenic -121431 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-2 chr14 30654441 30654687 + 0.974620203848502 NA intron (NM_177815, intron 1 of 12) CpG 189 NM_177815 328370 Mm.259657 NM_177815 ENSMUSG00000052395 Rft1 D930025H04 RFT1 homolog protein-coding common_peak1_25_34_-0.703744842489853_4.77741059570004_0.974620203848502-2 chr4 138454826 138455166 + 0.974620203848502 NA promoter-TSS (NM_025451) promoter-TSS (NM_025451) -152 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-10 chr6 108235428 108236063 + 0.974620203848502 NA intron (NM_010585, intron 2 of 61) intron (NM_010585, intron 2 of 61) 22649 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak2_25_34_-0.703744842489853_4.77741059570004_0.974620203848502 chr2 4421399 4421622 + 0.974620203848502 NA intron (NM_001177843, intron 1 of 23) intron (NM_001177843, intron 1 of 23) 20534 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502 chr11 115814749 115815381 + 0.974620203848502 NA exon (NM_029557, exon 2 of 11) exon (NM_029557, exon 2 of 11) 326 NM_029557 76265 Mm.275438 NM_029557 ENSMUSG00000020781 Tsen54 0610034P02Rik tRNA splicing endonuclease subunit 54 protein-coding common_peak2_24_34_-0.759929175219415_4.74931842933526_0.974620203848502-5 chr17 34836039 34836780 + 0.974620203848502 NA promoter-TSS (NM_001163770) promoter-TSS (NM_001163770) 494 NM_019442 54402 Mm.440064 NM_019442 ENSMUSG00000061207 Stk19 G11|RP1 serine/threonine kinase 19 protein-coding common_peak1_40_21_0.618582928536385_4.76872308290549_0.974620203848502-7 chr17 79711403 79712023 + 0.974620203848502 NA intron (NM_009994, intron 2 of 2) intron (NM_009994, intron 2 of 2) 3328 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_59_68_-0.485046891152284_5.86600101120203_0.97400764947013 chr10 95323609 95324160 + 0.97400764947013 NA promoter-TSS (NM_001330138) promoter-TSS (NM_001330138) -175 NM_001330138 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak2_59_68_-0.485046891152284_5.86600101120203_0.97400764947013-2 chr19 18811904 18812483 + 0.97400764947013 NA intron (NM_153417, intron 15 of 38) intron (NM_153417, intron 15 of 38) 62210 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_82_49_0.444467431116194_5.86608990533282_0.974007649470118-2 chr11 76406919 76407530 + 0.974007649470118 NA promoter-TSS (NM_023355) promoter-TSS (NM_023355) 81 NM_019818 56322 Mm.18803 NM_019818 ENSMUSG00000020843 Timm22 Tim22 translocase of inner mitochondrial membrane 22 protein-coding common_peak1_82_49_0.444467431116194_5.86608990533282_0.974007649470118 chr11 51936321 51937367 + 0.974007649470118 NA Intergenic ID_B1|SINE|B4 -30787 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_82_49_0.444467431116194_5.86608990533282_0.974007649470118-3 chr17 35126114 35126891 + 0.974007649470118 NA promoter-TSS (NM_033477) promoter-TSS (NM_033477) 100 NM_033477 114585 Mm.42070 NM_033477 ENSMUSG00000043311 D17H6S53E G4|NG34 DNA segment, Chr 17, human D6S53E protein-coding common_peak1_82_49_0.444467431116194_5.86608990533282_0.974007649470118-4 chr2 131178892 131179982 + 0.974007649470118 NA exon (NM_007682, exon 1 of 1) exon (NM_007682, exon 1 of 1) 630 NM_007682 12616 Mm.440169 NM_007682 ENSMUSG00000068267 Cenpb CENP-B centromere protein B protein-coding common_peak2_209_140_0.278530283227976_7.27881649401278_0.973137531827326 chr3 90079688 90080720 + 0.973137531827326 NA intron (NM_001357581, intron 1 of 8) CpG 683 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_99_61_0.401047572192189_6.15472009648297_0.973121849231041-3 chr5 138186606 138187848 + 0.973121849231041 NA promoter-TSS (NM_178612) promoter-TSS (NM_178612) -1 NM_001356600 21343 Mm.248517 NM_009315 ENSMUSG00000036980 Taf6 80kDa|AW549759|TAF(II)80|TAFII70|Taf2e|p80 TATA-box binding protein associated factor 6 protein-coding common_peak1_99_61_0.401047572192189_6.15472009648297_0.973121849231041-2 chr2 3712734 3714063 + 0.973121849231041 NA promoter-TSS (NM_025626) promoter-TSS (NM_025626) -60 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_99_61_0.401047572192189_6.15472009648297_0.973121849231041 chr11 100290503 100291648 + 0.973121849231041 NA Intergenic Intergenic -21204 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding common_peak2_99_61_0.401047572192189_6.15472009648297_0.973121849231041 chr3 123053512 123054799 + 0.973121849231041 NA Intergenic Intergenic -19168 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak2_73_82_-0.451133669862727_6.14947259641556_0.973121849231028 chr8 111027125 111028070 + 0.973121849231028 NA intron (NM_001190786, intron 1 of 11) intron (NM_001190786, intron 1 of 11) 173 NM_172284 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding common_peak2_248_240_-0.250785092684834_7.78749678988754_0.972861065155612 chr17 26616471 26619261 + 0.972861065155612 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) 56354 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_236_160_0.26043141081487_7.46113258352205_0.971905326596179 chr6 31125384 31127161 + 0.971905326596179 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -63179 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_90_55_0.412787322398395_6.0137485832568_0.97183630865368 chr12 112720591 112721323 + 0.97183630865368 NA Intergenic Intergenic -1217 NM_001024602 217882 Mm.23689 NM_001024602 ENSMUSG00000072825 Cep170b AI466840|AW555464|Kiaa0284|mKIAA0284 centrosomal protein 170B protein-coding common_peak1_91_55_0.428443400165407_6.02157662214031_0.97183630865368-2 chr15 53128560 53129287 + 0.97183630865368 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 217260 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_91_55_0.428443400165407_6.02157662214031_0.97183630865368 chr11 115824103 115825034 + 0.97183630865368 NA intron (NM_001252532, intron 1 of 25) CpG 510 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_90_55_0.412787322398395_6.0137485832568_0.97183630865368 chr2 32684938 32685913 + 0.97183630865368 NA intron (NM_010236, intron 12 of 14) intron (NM_010236, intron 12 of 14) 2341 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak1_90_55_0.412787322398395_6.0137485832568_0.97183630865368-2 chr3 95041617 95042550 + 0.97183630865368 NA intron (NM_001282017, intron 1 of 9) intron (NM_001282017, intron 1 of 9) 531 NM_001282017 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak1_91_55_0.428443400165407_6.02157662214031_0.97183630865368-3 chr3 85574130 85574880 + 0.97183630865368 NA intron (NM_144896, intron 1 of 12) intron (NM_144896, intron 1 of 12) 376 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding common_peak1_196_131_0.282144242716222_7.18546624071656_0.971501878641245 chr13 54302215 54303993 + 0.971501878641245 NA Intergenic CpG -68245 NM_009946 12890 Mm.268902 NM_009946 ENSMUSG00000025867 Cplx2 921-L|AI413745|AW492120|Gm34843 complexin 2 protein-coding common_peak2_46_25_0.573221585160963_4.98705051072157_0.97145127402441-3 chr2 166793844 166794341 + 0.97145127402441 NA intron (NM_023815, intron 1 of 1) CpG 325 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-9 chr7 58676320 58676922 + 0.97145127402441 NA intron (NM_009728, intron 1 of 20) B1F2|SINE|Alu 18419 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-6 chr2 27804147 27804714 + 0.97145127402441 NA Intergenic Intergenic -81995 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-2 chr11 8449061 8449619 + 0.97145127402441 NA intron (NM_001083587, intron 23 of 30) intron (NM_001083587, intron 23 of 30) 215195 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441-4 chr15 103357594 103358492 + 0.97145127402441 NA intron (NM_001314041, intron 3 of 30) intron (NM_001314041, intron 3 of 30) -7518 NR_105928 102466775 NR_105928 ENSMUSG00000098419 Mir6963 Gm27724|mmu-mir-6963 microRNA 6963 ncRNA unique_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-2 chr15 32921713 32922312 + 0.97145127402441 NA intron (NM_008304, intron 1 of 4) intron (NM_008304, intron 1 of 4) 1289 NM_008304 15529 Mm.234266 NM_008304 ENSMUSG00000022261 Sdc2 4833414L08Rik|AA960457|Hspg1|Synd2|syndecan-2 syndecan 2 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-7 chr3 87884970 87885500 + 0.97145127402441 NA exon (NM_033573, exon 1 of 7) exon (NM_033573, exon 1 of 7) 327 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding common_peak2_46_25_0.573221585160963_4.98705051072157_0.97145127402441-2 chr14 52257182 52257712 + 0.97145127402441 NA Intergenic CpG -19875 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441-2 chr11 80377551 80377984 + 0.97145127402441 NA intron (NM_027472, intron 1 of 9) intron (NM_027472, intron 1 of 9) 248 NM_027472 70591 Mm.86860 NM_027472 ENSMUSG00000057181 5730455P16Rik - RIKEN cDNA 5730455P16 gene protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-4 chr11 120466891 120467403 + 0.97145127402441 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 453 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-8 chr3 105686844 105687429 + 0.97145127402441 NA exon (NM_017397, exon 1 of 11) exon (NM_017397, exon 1 of 11) 435 NM_017397 53975 Mm.272826 NM_017397 ENSMUSG00000027905 Ddx20 GEMIN3|dp103 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 protein-coding common_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441-6 chr7 3291533 3291981 + 0.97145127402441 NA intron (NM_001093765, intron 1 of 2) B1_Mur3|SINE|Alu 1201 NM_001093765 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441-5 chr17 26973129 26973698 + 0.97145127402441 NA intron (NM_001005916, intron 1 of 1) intron (NM_001005916, intron 1 of 1) 234 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding common_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441-3 chr12 87299540 87300068 + 0.97145127402441 NA promoter-TSS (NM_001290302) promoter-TSS (NM_001290302) -99 NM_001290302 217738 Mm.219363 NM_001290302 ENSMUSG00000050671 Ism2 Gm264|Thsd3 isthmin 2 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-3 chr11 35951250 35952027 + 0.97145127402441 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 28451 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_29_39_-0.691395549688234_4.97623032004325_0.97145127402441 chr14 27070128 27070488 + 0.97145127402441 NA intron (NM_134437, intron 1 of 12) intron (NM_134437, intron 1 of 12) 31307 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441 chr1 74506277 74506616 + 0.97145127402441 NA promoter-TSS (NM_001310662) promoter-TSS (NM_001310662) 386 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding common_peak1_29_39_-0.691395549688234_4.97623032004325_0.97145127402441-2 chr2 172440618 172441117 + 0.97145127402441 NA intron (NM_025542, intron 1 of 8) intron (NM_025542, intron 1 of 8) 289 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtf2 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417|Rtfdc1 replication termination factor 2 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-5 chr13 98954614 98955234 + 0.97145127402441 NA Intergenic Intergenic -28540 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441 chr1 34005862 34006424 + 0.97145127402441 NA intron (NM_001276764, intron 3 of 102) CpG -5682 NM_133833 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding unique_peak2_29_39_-0.691395549688234_4.97623032004325_0.97145127402441 chr8 32006054 32006644 + 0.97145127402441 NA Intergenic Intergenic -88146 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-10 chr8 11550030 11550624 + 0.97145127402441 NA intron (NM_001359137, intron 1 of 14) intron (NM_001359137, intron 1 of 14) 444 NM_024248 71941 Mm.196576 NM_024248 ENSMUSG00000056228 Cars2 2310051N18Rik|2410044A07Rik|D530030H10Rik|cysRS cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak2_46_25_0.573221585160963_4.98705051072157_0.97145127402441 chr1 90100230 90100576 + 0.97145127402441 NA intron (NM_029122, intron 7 of 18) intron (NM_029122, intron 7 of 18) 52998 NM_029122 74918 Mm.317517 NM_029122 ENSMUSG00000026301 Iqca 4930465P12Rik|4930585L22Rik|BB288505|Iqca1 IQ motif containing with AAA domain protein-coding unique_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441-3 chr15 97767045 97767849 + 0.97145127402441 NA 5' UTR (NM_144850, exon 1 of 28) 5' UTR (NM_144850, exon 1 of 28) 219 NM_001177810 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak1_46_25_0.573221585160963_4.98705051072157_0.97145127402441 chr10 39898540 39899169 + 0.97145127402441 NA intron (NR_033628, intron 1 of 3) intron (NR_033628, intron 1 of 3) 384 NR_033628 213332 Mm.484359 NR_033628 Mfsd4b4 AA474331 major facilitator superfamily domain containing 4B4 pseudo common_peak1_139_89_0.345392937069641_6.6645495648645_0.971287062825024 chr11 83876319 83877803 + 0.971287062825024 NA intron (NM_009330, intron 4 of 8) (TTTC)n|Simple_repeat|Simple_repeat 24101 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_108_114_-0.366795165815929_6.66209246803641_0.971287062825024 chr1 86525460 86526335 + 0.971287062825024 NA promoter-TSS (NM_001360831) promoter-TSS (NM_001360831) -660 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_138_89_0.335123955053412_6.65941507385638_0.971287062825024 chr11 103261686 103263170 + 0.971287062825024 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 4973 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak2_128_132_-0.335259282637547_6.88765279418242_0.970416285148547-2 chr6 108446705 108448165 + 0.970416285148547 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -42308 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_128_132_-0.335259282637547_6.88765279418242_0.970416285148547 chr10 42501934 42503318 + 0.970416285148547 NA intron (NM_017472, intron 1 of 3) CpG 572 NM_017472 54198 Mm.277870 NM_017472 ENSMUSG00000019804 Snx3 SDP3 sorting nexin 3 protein-coding common_peak2_210_141_0.275139834653954_7.28731703683166_0.968828738958718 chr4 40820388 40822357 + 0.968828738958718 NA intron (NM_022305, intron 2 of 5) intron (NM_022305, intron 2 of 5) 28766 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_109_68_0.383252864999525_6.30015088927793_0.968381485337565-2 chr19 41912046 41912651 + 0.968381485337565 NA intron (NM_023418, intron 1 of 3) CpG 477 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak2_109_68_0.383252864999525_6.30015088927793_0.968381485337565 chr11 5837100 5837860 + 0.968381485337565 NA intron (NM_017401, intron 1 of 10) CpG 536 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak2_109_68_0.383252864999525_6.30015088927793_0.968381485337565-3 chr8 13667727 13668355 + 0.968381485337565 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 9546 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_129_82_0.356045682715579_6.55306227270471_0.968151132451004-2 chr15 58258521 58259366 + 0.968151132451004 NA Intergenic Intergenic -44051 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak1_129_82_0.356045682715579_6.55306227270471_0.968151132451004 chr11 74556924 74558148 + 0.968151132451004 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 32622 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_129_82_0.356045682715579_6.55306227270471_0.968151132451004 chr4 43381445 43382479 + 0.968151132451004 NA promoter-TSS (NM_001037709) promoter-TSS (NM_001037709) -20 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_99_106_-0.386223103822083_6.54835543449011_0.968151132450979 chr11 69846179 69847241 + 0.968151132450979 NA promoter-TSS (NM_023564) promoter-TSS (NM_023564) 66 NR_033133 70310 Mm.28874 NM_023564 ENSMUSG00000019461 Plscr3 2210403O21Rik|2610037N06Rik|ESTM3|X83310 phospholipid scramblase 3 protein-coding common_peak1_74_44_0.451281368050088_5.71749378035472_0.967990332264347-2 chr3 81932610 81932986 + 0.967990332264347 NA intron (NM_177662, intron 1 of 7) intron (NM_177662, intron 1 of 7) 197 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding common_peak1_75_44_0.470255378642228_5.72698078565079_0.967990332264347 chr10 18318704 18319697 + 0.967990332264347 NA Intergenic CpG -84219 NM_144820 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding common_peak2_53_62_-0.504733072599757_5.72491338720004_0.967990332264347-2 chr7 78846423 78847233 + 0.967990332264347 NA intron (NM_029585, intron 1 of 4) intron (NM_029585, intron 1 of 4) 383 NM_029585 76375 Mm.250541 NM_029585 ENSMUSG00000030610 Det1 2610034H20Rik de-etiolated homolog 1 (Arabidopsis) protein-coding common_peak2_53_62_-0.504733072599757_5.72491338720004_0.967990332264347-3 chr8 13675618 13676301 + 0.967990332264347 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 1628 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_75_44_0.470255378642228_5.72698078565079_0.967990332264347-2 chr5 36747969 36748866 + 0.967990332264347 NA exon (NM_133724, exon 1 of 1) exon (NM_133724, exon 1 of 1) 262 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak2_53_62_-0.504733072599757_5.72491338720004_0.967990332264347-4 chr8 33653602 33654746 + 0.967990332264347 NA intron (NM_010344, intron 1 of 12) MER5B|DNA|hAT-Charlie 936 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak1_52_62_-0.531509868230057_5.71152498938489_0.967990332264347 chr10 37138131 37138739 + 0.967990332264347 NA exon (NM_008538, exon 1 of 2) exon (NM_008538, exon 1 of 2) 491 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_74_44_0.451281368050088_5.71749378035472_0.967990332264347 chr10 80115830 80116393 + 0.967990332264347 NA non-coding (NR_126043, exon 1 of 11) non-coding (NR_126043, exon 1 of 11) 308 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak2_75_44_0.470255378642228_5.72698078565079_0.967990332264347 chr17 15499929 15500851 + 0.967990332264347 NA intron (NM_013684, intron 1 of 7) intron (NM_013684, intron 1 of 7) 502 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding common_peak2_53_62_-0.504733072599757_5.72491338720004_0.967990332264347 chr11 74838649 74839639 + 0.967990332264347 NA intron (NM_010813, intron 4 of 5) intron (NM_010813, intron 4 of 5) 8220 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_184_183_-0.287054275392181_7.38003481836092_0.967797094308283 chr15 99393046 99394053 + 0.967797094308283 NA intron (NM_001171035, intron 1 of 9) intron (NM_001171035, intron 1 of 9) 330 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_184_183_-0.287054275392181_7.38003481836092_0.967797094308283-2 chr4 45528526 45530718 + 0.967797094308283 NA exon (NM_001033306, exon 1 of 6) exon (NM_001033306, exon 1 of 6) 1206 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_119_75_0.368495072609056_6.43217504974811_0.966993576493119 chr4 150707614 150708779 + 0.966993576493119 NA Intergenic Intergenic -56022 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_90_98_-0.409214375623611_6.4247494322678_0.966993576493119 chr6 115675612 115676505 + 0.966993576493119 NA promoter-TSS (NR_152134) promoter-TSS (NR_152134) 90 NR_152134 352968 Mm.184163 NR_152134 D830050J10Rik - RIKEN cDNA D830050J10 gene ncRNA common_peak2_60_34_0.51787305235791_5.38821954312392_0.966872998477971-5 chr8 69973773 69974090 + 0.966872998477971 NA intron (NM_001286450, intron 1 of 12) CpG 452 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_60_34_0.51787305235791_5.38821954312392_0.966872998477971-2 chr11 118430591 118431352 + 0.966872998477971 NA intron (NM_001204129, intron 1 of 3) intron (NM_001204129, intron 1 of 3) 2514 NM_001204129 56745 Mm.23845 NM_019959 ENSMUSG00000017446 C1qtnf1 1600017K21Rik|CTRP1|Zsig37 C1q and tumor necrosis factor related protein 1 protein-coding common_peak2_60_34_0.51787305235791_5.38821954312392_0.966872998477971-2 chr14 67932896 67933428 + 0.966872998477971 NA intron (NM_177780, intron 1 of 51) CpG 410 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_60_34_0.51787305235791_5.38821954312392_0.966872998477971-4 chr8 47973554 47974067 + 0.966872998477971 NA intron (NM_133791, intron 1 of 22) B2_Mm2|SINE|B2 16741 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_60_34_0.51787305235791_5.38821954312392_0.966872998477971 chr5 104396630 104397374 + 0.966872998477971 NA Intergenic Intergenic -38109 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_60_34_0.51787305235791_5.38821954312392_0.966872998477971-3 chr19 5460660 5461064 + 0.966872998477971 NA intron (NM_021438, intron 1 of 9) intron (NM_021438, intron 1 of 9) 255 NM_021438 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding common_peak1_60_34_0.51787305235791_5.38821954312392_0.966872998477971 chr10 23184879 23185506 + 0.966872998477971 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 164698 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_60_34_0.51787305235791_5.38821954312392_0.966872998477971-3 chr16 5233590 5234226 + 0.966872998477971 NA intron (NM_145362, intron 1 of 12) intron (NM_145362, intron 1 of 12) 287 NM_145362 208211 Mm.34581 NM_145362 ENSMUSG00000039427 Alg1 HMAT1|HMT1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein-coding common_peak1_60_34_0.51787305235791_5.38821954312392_0.966872998477971-4 chr9 56551599 56552518 + 0.966872998477971 NA Intergenic L3|LINE|CR1 83590 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_60_34_0.51787305235791_5.38821954312392_0.966872998477971 chr1 39555437 39556050 + 0.966872998477971 NA intron (NM_001033135, intron 5 of 6) intron (NM_001033135, intron 5 of 6) -6903 NR_028555 100217461 NR_028555 ENSMUSG00000077704 Snord89 MBII-289 small nucleolar RNA, C/D box 89 snoRNA common_peak1_40_50_-0.594410794797813_5.37521994457259_0.966872998477965 chr9 107709119 107710079 + 0.966872998477965 NA intron (NM_011349, intron 1 of 17) CpG 876 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak2_40_50_-0.594410794797813_5.37521994457259_0.966872998477965-4 chr5 37338017 37338968 + 0.966872998477965 NA promoter-TSS (NM_145920) promoter-TSS (NM_145920) 14 NM_145920 68525 Mm.25506 NM_145920 ENSMUSG00000050248 Evc2 1110017L09Rik|Lbn|limbin EvC ciliary complex subunit 2 protein-coding common_peak2_40_50_-0.594410794797813_5.37521994457259_0.966872998477965 chr1 132150449 132150929 + 0.966872998477965 NA Intergenic Intergenic -11004 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak2_40_50_-0.594410794797813_5.37521994457259_0.966872998477965-2 chr2 72978738 72979615 + 0.966872998477965 NA promoter-TSS (NR_045269) promoter-TSS (NR_045269) 105 NM_001098425 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak2_40_50_-0.594410794797813_5.37521994457259_0.966872998477965 chr4 133545291 133545886 + 0.966872998477965 NA intron (NM_010948, intron 1 of 7) intron (NM_010948, intron 1 of 7) 439 NM_010948 18221 Mm.69 NM_010948 ENSMUSG00000028851 Nudc SIG-92|Silg92 nudC nuclear distribution protein protein-coding common_peak2_40_50_-0.594410794797813_5.37521994457259_0.966872998477965-3 chr4 139581348 139581926 + 0.966872998477965 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 6917 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_46_56_-0.559228710862687_5.5532756587334_0.965186267682351 chr16 37539932 37540198 + 0.965186267682351 NA promoter-TSS (NM_028812) promoter-TSS (NM_028812) 171 NM_001042499 67657 Mm.28158 NM_026297 ENSMUSG00000022827 Rabl3 4930553C05Rik|AA958834 RAB, member RAS oncogene family-like 3 protein-coding common_peak1_46_56_-0.559228710862687_5.5532756587334_0.965186267682351 chr8 36723263 36723744 + 0.965186267682351 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 9551 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_67_39_0.480847782875845_5.56235198632529_0.965186267682351 chr14 20247778 20248742 + 0.965186267682351 NA Intergenic Intergenic 20902 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-21 chr3 56380815 56381183 + 0.965105923112245 NA Intergenic Intergenic -197298 NM_030595 26422 Mm.384353 NM_030595 ENSMUSG00000027799 Nbea Lyst2|mKIAA1544 neurobeachin protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245 chr11 85310510 85310876 + 0.965105923112245 NA promoter-TSS (NM_016910) promoter-TSS (NM_016910) -561 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-7 chr13 5723852 5724163 + 0.965105923112245 NA Intergenic Intergenic 134085 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-16 chr19 5055115 5055458 + 0.965105923112245 NA 3' UTR (NM_145495, exon 10 of 10) 3' UTR (NM_145495, exon 10 of 10) 4478 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245 chr1 43152417 43152778 + 0.965105923112245 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 11364 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_10_18_-1.05464215170004_3.72060643759357_0.965105923112245 chr11 35919263 35919471 + 0.965105923112245 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 60722 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-8 chr16 24433153 24433524 + 0.965105923112245 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -14753 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_21_9_0.864302287282942_3.75407923852883_0.965105923112245-2 chr11 106674817 106675072 + 0.965105923112245 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 40337 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-7 chr5 137100767 137100971 + 0.965105923112245 NA Intergenic Intergenic 15338 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-4 chr12 103685514 103685737 + 0.965105923112245 NA Intergenic Intergenic -8863 NM_001310472 194604 NM_001310472 ENSMUSG00000071179 Serpina16 Gm46 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-28 chr5 36176549 36176830 + 0.965105923112245 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -27332 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-5 chr5 34999985 35000340 + 0.965105923112245 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 1084 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-15 chr8 24666653 24666881 + 0.965105923112245 NA intron (NR_136908, intron 5 of 19) intron (NR_136908, intron 5 of 19) 7988 NR_136908 13524 Mm.89943 NM_010084 ENSMUSG00000031552 Adam18 Adam27|Dtgn3|Tmdc3|tMDCIII a disintegrin and metallopeptidase domain 18 protein-coding common_peak2_21_9_0.864302287282942_3.75407923852883_0.965105923112245 chr11 75405683 75405910 + 0.965105923112245 NA TTS (NM_001102611) TTS (NM_001102611) 16827 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-4 chr11 43892884 43893328 + 0.965105923112245 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) 8131 NM_001284380 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-5 chr13 43131021 43131545 + 0.965105923112245 NA intron (NM_001005740, intron 10 of 12) intron (NM_001005740, intron 10 of 12) 8444 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-21 chr9 43225492 43225891 + 0.965105923112245 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 14125 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-17 chr19 29371751 29372067 + 0.965105923112245 NA intron (NM_021893, intron 1 of 6) intron (NM_021893, intron 1 of 6) 4471 NM_021893 60533 Mm.245363 NM_021893 ENSMUSG00000016496 Cd274 A530045L16Rik|B7h1|Pdcd1l1|Pdcd1lg1|Pdl1 CD274 antigen protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-12 chr2 109704051 109704581 + 0.965105923112245 NA intron (NM_001285417, intron 1 of 1) intron (NM_001285417, intron 1 of 1) -5067 NM_001285421 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-14 chr18 35296776 35296977 + 0.965105923112245 NA intron (NM_001360814, intron 7 of 9) intron (NM_001360814, intron 7 of 9) -81852 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-4 chr3 122319471 122319917 + 0.965105923112245 NA Intergenic Intergenic -25991 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-18 chr2 38826110 38826413 + 0.965105923112245 NA intron (NM_010264, intron 3 of 10) intron (NM_010264, intron 3 of 10) -26474 NR_029568 387176 NR_029568 ENSMUSG00000065423 Mir181a-2 Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a|mir-181a-2 microRNA 181a-2 ncRNA unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-13 chr5 113209814 113210054 + 0.965105923112245 NA Intergenic Intergenic -16975 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-11 chr16 44493938 44494287 + 0.965105923112245 NA intron (NM_172506, intron 8 of 18) intron (NM_172506, intron 8 of 18) 64017 NR_037242 100526478 NR_037242 ENSMUSG00000093046 Mir3081 mir-3081|mmu-mir-3081 microRNA 3081 ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-32 chr8 117344561 117344820 + 0.965105923112245 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -4480 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-2 chr13 69592245 69592487 + 0.965105923112245 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 19097 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-30 chr8 70643364 70643589 + 0.965105923112245 NA Intergenic Intergenic -11020 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-9 chr15 98179704 98180021 + 0.965105923112245 NA Intergenic Intergenic 12056 NM_177716 239650 Mm.54140 NM_177716 ENSMUSG00000029875 Ccdc184 5630400A08|AI836003 coiled-coil domain containing 184 protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-9 chr9 109054586 109054836 + 0.965105923112245 NA promoter-TSS (NM_026381) promoter-TSS (NM_026381) -155 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-18 chr8 94993287 94993544 + 0.965105923112245 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 9016 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-17 chr8 94980495 94980767 + 0.965105923112245 NA intron (NM_001198894, intron 1 of 13) intron (NM_001198894, intron 1 of 13) 3522 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-5 chr4 45499389 45499738 + 0.965105923112245 NA intron (NM_001033306, intron 1 of 5) B1_Mur4|SINE|Alu 31265 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-23 chr3 88531106 88531400 + 0.965105923112245 NA Intergenic Intergenic -1142 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding unique_peak2_21_9_0.864302287282942_3.75407923852883_0.965105923112245 chr13 63672825 63673042 + 0.965105923112245 NA Intergenic Intergenic 61365 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-6 chr15 36761810 36762061 + 0.965105923112245 NA Intergenic Intergenic 28997 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-7 chr15 99510450 99510696 + 0.965105923112245 NA intron (NM_001038658, intron 11 of 11) intron (NM_001038658, intron 11 of 11) 17592 NM_028224 72393 Mm.39760 NM_028224 ENSMUSG00000023011 Faim2 2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2 Fas apoptotic inhibitory molecule 2 protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-3 chr3 41288531 41288778 + 0.965105923112245 NA Intergenic Intergenic 204545 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-24 chr4 57861759 57862129 + 0.965105923112245 NA intron (NM_009649, intron 2 of 2) intron (NM_009649, intron 2 of 2) 7382 NM_001035533 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-3 chr12 84880257 84880461 + 0.965105923112245 NA TTS (NR_028577) TTS (NR_028577) -3864 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-10 chr15 101173654 101173892 + 0.965105923112245 NA promoter-TSS (NM_007395) promoter-TSS (NM_007395) -299 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ALK-4|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding common_peak2_21_9_0.864302287282942_3.75407923852883_0.965105923112245-3 chr15 59596466 59596676 + 0.965105923112245 NA intron (NM_026746, intron 6 of 6) intron (NM_026746, intron 6 of 6) -52083 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-22 chrX 152769141 152769532 + 0.965105923112245 NA exon (NM_001290684, exon 1 of 10) exon (NM_001290684, exon 1 of 10) 150 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-11 chr17 84363587 84363893 + 0.965105923112245 NA intron (NM_183021, intron 26 of 37) intron (NM_183021, intron 26 of 37) 102468 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-34 chr9 120963730 120964078 + 0.965105923112245 NA TTS (NM_177589) TTS (NM_177589) 8818 NR_106058 102465661 NR_106058 ENSMUSG00000106193 Mir7090 mmu-mir-7090 microRNA 7090 ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-9 chr16 28929818 28930109 + 0.965105923112245 NA promoter-TSS (NM_177718) promoter-TSS (NM_177718) -265 NM_177718 239796 Mm.155887 NM_177718 ENSMUSG00000051065 Mb21d2 1600021P15Rik|A430031N04|C87006 Mab-21 domain containing 2 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-13 chr17 64622124 64622378 + 0.965105923112245 NA intron (NM_008549, intron 1 of 21) intron (NM_008549, intron 1 of 21) 20602 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-10 chr16 33886378 33886729 + 0.965105923112245 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 56888 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-33 chr9 8042538 8042829 + 0.965105923112245 NA exon (NM_001358295, exon 1 of 6) exon (NM_001358295, exon 1 of 6) 192 NR_152396 234912 Mm.172430 NM_199017 ENSMUSG00000053070 9230110C19Rik - RIKEN cDNA 9230110C19 gene protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-2 chr1 186116945 186117240 + 0.965105923112245 NA intron (NM_146106, intron 1 of 4) CpG 218 NM_146106 226791 Mm.257116 NM_146106 ENSMUSG00000039246 Lyplal1 BC027340|Q96AVO lysophospholipase-like 1 protein-coding common_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-4 chr4 134288056 134288303 + 0.965105923112245 NA promoter-TSS (NM_001163794) promoter-TSS (NM_001163794) -333 NM_146156 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-26 chr4 129959859 129960111 + 0.965105923112245 NA promoter-TSS (NR_040647) promoter-TSS (NR_040647) -389 NR_040647 72225 Mm.102193 NR_040647 1700003M07Rik - RIKEN cDNA 1700003M07 gene ncRNA common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-8 chr8 14324578 14324898 + 0.965105923112245 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 228863 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-8 chr15 77729195 77729568 + 0.965105923112245 NA intron (NM_001168660, intron 1 of 2) intron (NM_001168660, intron 1 of 2) 260 NM_001168660 71898 Mm.422856 NM_173743 ENSMUSG00000068246 Apol9b 2310016F22Rik apolipoprotein L 9b protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-25 chr4 68864824 68865044 + 0.965105923112245 NA intron (NM_019967, intron 2 of 7) intron (NM_019967, intron 2 of 7) 89463 NM_019967 56710 Mm.248788 NM_019967 ENSMUSG00000028351 Brinp1 BRINP|Dbc1|Dbccr1|Fam5a bone morphogenic protein/retinoic acid inducible neural specific 1 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-16 chr8 35917745 35917957 + 0.965105923112245 NA Intergenic Intergenic -34894 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak1_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-2 chr11 88558831 88559091 + 0.965105923112245 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -60290 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-22 chr3 57554837 57555245 + 0.965105923112245 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 20835 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-29 chr5 124047424 124047692 + 0.965105923112245 NA Intergenic ID_B1|SINE|B4 -15298 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-3 chr3 81060992 81061340 + 0.965105923112245 NA intron (NM_019971, intron 1 of 5) intron (NM_019971, intron 1 of 5) 24750 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-14 chr5 117135579 117135939 + 0.965105923112245 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 2171 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-20 chr8 121188655 121189093 + 0.965105923112245 NA Intergenic Intergenic 61189 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-27 chr4 150056677 150057043 + 0.965105923112245 NA Intergenic Intergenic -11594 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245 chr13 13954685 13954990 + 0.965105923112245 NA exon (NM_001362404, exon 1 of 13) exon (NM_001362404, exon 1 of 13) 163 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding common_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-2 chr16 93909970 93910306 + 0.965105923112245 NA Intergenic Intergenic 19429 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245 chr10 86163906 86164235 + 0.965105923112245 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 68216 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-15 chr18 39718045 39718354 + 0.965105923112245 NA Intergenic Intergenic -55298 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-5 chr11 88864180 88864426 + 0.965105923112245 NA intron (NR_126433, intron 3 of 4) CpG 283 NM_001042541 11640 Mm.2969 NM_009648 ENSMUSG00000018428 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84 A kinase (PRKA) anchor protein 1 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-19 chr2 128943461 128943721 + 0.965105923112245 NA intron (NM_020594, intron 1 of 8) CpG 429 NM_020594 57432 Mm.11675 NM_020594 ENSMUSG00000027387 Zc3h8 AU020882|E130108N08Rik|Fliz1|Zc3hdc8 zinc finger CCCH type containing 8 protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-3 chr10 69669067 69669572 + 0.965105923112245 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 135611 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-6 chr11 118023358 118023652 + 0.965105923112245 NA non-coding (NR_151726, exon 10 of 10) non-coding (NR_151726, exon 10 of 10) 21235 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-2 chr11 83937404 83937719 + 0.965105923112245 NA Intergenic Intergenic -4529 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-31 chr8 83666732 83667046 + 0.965105923112245 NA 5' UTR (NM_013641, exon 1 of 3) 5' UTR (NM_013641, exon 1 of 3) 245 NM_013641 19216 Mm.213000 NM_013641 ENSMUSG00000019464 Ptger1 EP1|Ptgerep1 prostaglandin E receptor 1 (subtype EP1) protein-coding common_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-6 chr5 36663720 36663922 + 0.965105923112245 NA intron (NM_001081232, intron 2 of 8) intron (NM_001081232, intron 2 of 8) 32200 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-19 chr8 111626299 111626638 + 0.965105923112245 NA TTS (NM_001168623) TTS (NM_001168623) 3854 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-12 chr17 46202258 46202469 + 0.965105923112245 NA promoter-TSS (NM_028198) promoter-TSS (NM_028198) 262 NM_030715 80905 Mm.311585 NM_030715 ENSMUSG00000023953 Polh RAD30A|XPV polymerase (DNA directed), eta (RAD 30 related) protein-coding unique_peak1_21_9_0.864302287282942_3.75407923852883_0.965105923112245-20 chr2 180069859 180070290 + 0.965105923112245 NA promoter-TSS (NM_001083328) promoter-TSS (NM_001083328) -519 NM_001083328 52856 Mm.219658 NM_028422 ENSMUSG00000039069 Mtg2 1810011P19Rik|2900056P18Rik|D2Bwg0647e|Gtpbp5 mitochondrial ribosome associated GTPase 2 protein-coding common_peak2_10_18_-1.05464215170004_3.72060643759357_0.965105923112245-6 chr9 58436122 58436348 + 0.965105923112245 NA Intergenic Intergenic -18938 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak2_129_133_-0.335004076395268_6.89858715226014_0.964790599438588 chr4 125126388 125127877 + 0.964790599438588 NA intron (NM_153159, intron 1 of 5) intron (NM_153159, intron 1 of 5) 749 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_162_106_0.313676003323278_6.89830498806278_0.964790599438563 chr7 45872807 45874454 + 0.964790599438563 NA intron (NM_133950, intron 1 of 4) intron (NM_133950, intron 1 of 4) 790 NM_133950 68137 Mm.298433 NM_133950 ENSMUSG00000002778 Kdelr1 8030486F04Rik|AW215843|Erd2.1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 protein-coding common_peak1_173_173_-0.29424985181725_7.2958185699401_0.964574929769538 chr7 110018218 110020107 + 0.964574929769538 NA intron (NM_181517, intron 1 of 24) MIRc|SINE|MIR 911 NM_001362172 233726 Mm.222328 NM_181517 ENSMUSG00000066232 Ipo7 A330055O14Rik|C330016G14|Imp7|Ranbp7 importin 7 protein-coding common_peak1_74_83_-0.449182958398998_6.16772594357926_0.963785458975827-2 chr8 107056903 107057535 + 0.963785458975827 NA promoter-TSS (NM_139229) promoter-TSS (NM_139229) 342 NR_028367 66164 Mm.334789 NM_025391 ENSMUSG00000031917 Nip7 1110017C15Rik|6330509M23Rik|AA408773|AA410017|PEachy NIP7, nucleolar pre-rRNA processing protein protein-coding common_peak2_75_83_-0.430208947806858_6.17721294887533_0.963785458975827-2 chr8 95852220 95853470 + 0.963785458975827 NA 5' UTR (NM_172758, exon 2 of 12) 5' UTR (NM_172758, exon 2 of 12) 646 NM_172758 234595 Mm.29267 NM_172758 ENSMUSG00000036534 Slc38a7 D430050E18 solute carrier family 38, member 7 protein-coding common_peak1_75_83_-0.430208947806858_6.17721294887533_0.963785458975827-2 chr5 77384503 77385334 + 0.963785458975827 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 23127 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_74_83_-0.449182958398998_6.16772594357926_0.963785458975827 chr18 60732729 60733423 + 0.963785458975827 NA promoter-TSS (NM_001348102) promoter-TSS (NM_001348102) 65 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_75_83_-0.430208947806858_6.17721294887533_0.963785458975827 chr11 68386229 68387480 + 0.963785458975827 NA promoter-TSS (NM_008744) promoter-TSS (NM_008744) -28 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding common_peak1_75_83_-0.430208947806858_6.17721294887533_0.963785458975827 chr13 73679878 73680611 + 0.963785458975827 NA 3' UTR (NM_028878, exon 12 of 12) 3' UTR (NM_028878, exon 12 of 12) -2221 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding common_peak1_100_62_0.392217975757497_6.17338891137867_0.963785458975815-3 chr3 121685986 121686736 + 0.963785458975815 NA Intergenic Intergenic 15598 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_100_62_0.392217975757497_6.17338891137867_0.963785458975815-2 chr3 10439459 10440326 + 0.963785458975815 NA intron (NM_001127191, intron 1 of 6) CpG 238 NM_029068 74718 Mm.440548 NM_029068 ENSMUSG00000027534 Snx16 4930522N22Rik|AI117577|AI747675 sorting nexin 16 protein-coding common_peak1_100_62_0.392217975757497_6.17338891137867_0.963785458975815 chr12 102743362 102744775 + 0.963785458975815 NA promoter-TSS (NM_022323) promoter-TSS (NM_022323) 308 NM_177140 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding common_peak2_151_98_0.325696875319049_6.79220505773913_0.963773083007756 chr2 157450093 157451746 + 0.963773083007756 NA intron (NM_001025395, intron 2 of 13) intron (NM_001025395, intron 2 of 13) 26626 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_60_69_-0.48212694764209_5.88821954312392_0.962598551638142 chr19 16365638 16366437 + 0.962598551638142 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -51033 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_283_195_0.235800938445034_7.73261031333772_0.962435501537976 chr15 80081366 80083327 + 0.962435501537976 NA TTS (NR_028281) TTS (NR_028281) 560 NR_028281 100302600 NR_028281 Snord43 MBII-47 small nucleolar RNA, C/D box 43 snoRNA common_peak1_92_56_0.418395127615495_6.04208757797249_0.961593029824701 chr15 97812540 97813715 + 0.961593029824701 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 1736 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_67_76_-0.464010662931694_6.03478120922905_0.961593029824701 chr11 3202030 3202591 + 0.961593029824701 NA promoter-TSS (NM_001166547) promoter-TSS (NM_001166547) -43 NM_001166548 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding common_peak1_92_56_0.418395127615495_6.04208757797249_0.961593029824701-4 chr8 25806406 25807638 + 0.961593029824701 NA Intergenic Intergenic -1452 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding common_peak1_92_56_0.418395127615495_6.04208757797249_0.961593029824701-2 chr16 32246162 32247704 + 0.961593029824701 NA promoter-TSS (NM_173439) promoter-TSS (NM_173439) 92 NM_173439 268882 Mm.256137 NM_173439 ENSMUSG00000035764 Fbxo45 2610017J04Rik|AI463119|BC026799 F-box protein 45 protein-coding common_peak1_92_56_0.418395127615495_6.04208757797249_0.961593029824701-3 chr3 145648180 145649013 + 0.961593029824701 NA exon (NM_010516, exon 3 of 5) exon (NM_010516, exon 3 of 5) 1389 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_67_76_-0.464010662931694_6.03478120922905_0.961593029824701-2 chr8 120225007 120225857 + 0.961593029824701 NA intron (NR_110496, intron 1 of 2) intron (NR_110496, intron 1 of 2) 2798 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_151_153_-0.311733045296243_7.11092001804678_0.961520638944296 chr18 31758981 31760850 + 0.961520638944296 NA promoter-TSS (NM_001242430) promoter-TSS (NM_001242430) 91 NM_153515 225339 Mm.290804 NM_153515 ENSMUSG00000041915 Ammecr1l 5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik AMME chromosomal region gene 1-like protein-coding common_peak2_101_107_-0.371276022172807_6.56924949107706_0.961090870314488 chr17 51178427 51179678 + 0.961090870314488 NA intron (NM_028162, intron 1 of 21) CpG 300 NM_028162 72238 Mm.120650 NM_028162 ENSMUSG00000023923 Tbc1d5 1600014N05Rik TBC1 domain family, member 5 protein-coding common_peak1_100_107_-0.385389602906055_6.56219270071044_0.961090870314488 chr1 128416655 128417458 + 0.961090870314488 NA intron (NM_145507, intron 1 of 3) CpG 360 NM_177445 226414 Mm.28693 NM_145507 ENSMUSG00000026356 Dars 5730439G15Rik aspartyl-tRNA synthetase protein-coding common_peak2_130_83_0.34974488566363_6.56718986561058_0.961090870314463 chr16 22161911 22163300 + 0.961090870314463 NA intron (NM_183029, intron 1 of 15) CpG 694 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding unique_peak1_5_3_0.324985605591739_2.16249280279587_0.96108193396963-3 chr4 135987482 135987704 + 0.96108193396963 NA promoter-TSS (NM_025411) promoter-TSS (NM_025411) -349 NM_025411 66193 Mm.29131 NM_025411 ENSMUSG00000028669 Pithd1 1110049F12Rik|AA408179|Trp26 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 protein-coding unique_peak2_2_5_-1.25292191555617_1.95850154294307_0.96108193396963-4 chr5 64969388 64969627 + 0.96108193396963 NA promoter-TSS (NM_026667) promoter-TSS (NM_026667) -568 NM_026667 68303 Mm.258545 NM_026667 ENSMUSG00000029185 Fam114a1 1190001N04Rik|9130005N14Rik|Noxp20 family with sequence similarity 114, member A1 protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-6 chr3 88604091 88604335 + 0.96108193396963 NA Intergenic RSINE1|SINE|B4 -11994 NM_001198911 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-9 chr8 78714343 78714574 + 0.96108193396963 NA intron (NM_001009981, intron 9 of 10) LTR82A|LTR|ERVL 106694 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-4 chr16 43699795 43700010 + 0.96108193396963 NA Intergenic B1_Mus2|SINE|Alu -35718 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-7 chr5 111154007 111154389 + 0.96108193396963 NA intron (NM_001267622, intron 5 of 22) MLT1M|LTR|ERVL-MaLR 150054 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak2_2_5_-1.25292191555617_1.95850154294307_0.96108193396963-2 chr17 6144942 6145166 + 0.96108193396963 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 6906 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak1_5_3_0.324985605591739_2.16249280279587_0.96108193396963-2 chr2 3191884 3192076 + 0.96108193396963 NA intron (NM_001347067, intron 3 of 7) intron (NM_001347067, intron 3 of 7) 73295 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding unique_peak2_2_5_-1.25292191555617_1.95850154294307_0.96108193396963-5 chr8 35866916 35867130 + 0.96108193396963 NA intron (NR_046181, intron 2 of 2) URR1B|DNA|hAT-Charlie 15934 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-2 chr11 49267752 49267976 + 0.96108193396963 NA Intergenic URR1A|DNA|hAT-Charlie -12286 NM_146471 258463 Mm.377517 NM_146471 ENSMUSG00000059864 Olfr1393 MOR256-24 olfactory receptor 1393 protein-coding unique_peak1_5_3_0.324985605591739_2.16249280279587_0.96108193396963-4 chr5 39252339 39252580 + 0.96108193396963 NA Intergenic Intergenic 351115 NR_045416 75095 Mm.332354 NR_045416 ENSMUSG00000106741 4930513D17Rik - RIKEN cDNA 4930513D17 gene ncRNA unique_peak2_2_5_-1.25292191555617_1.95850154294307_0.96108193396963-3 chr2 38164235 38164438 + 0.96108193396963 NA intron (NM_146122, intron 2 of 21) intron (NM_146122, intron 2 of 21) 123048 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963 chr11 31599759 31599964 + 0.96108193396963 NA Intergenic Intergenic 72001 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-5 chr2 29968243 29968444 + 0.96108193396963 NA intron (NM_001177668, intron 1 of 55) intron (NM_001177668, intron 1 of 55) 2783 NM_001309460 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-8 chr6 58844973 58845202 + 0.96108193396963 NA intron (NM_001361966, intron 3 of 25) B3|SINE|B2 11387 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding unique_peak1_5_3_0.324985605591739_2.16249280279587_0.96108193396963-5 chr9 31295849 31296036 + 0.96108193396963 NA Intergenic ID4|SINE|ID -19165 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding unique_peak2_2_5_-1.25292191555617_1.95850154294307_0.96108193396963 chr12 10038451 10038665 + 0.96108193396963 NA Intergenic Intergenic -331413 NM_027588 70881 Mm.272843 NM_027588 ENSMUSG00000020622 Nt5c1b 4921514H13Rik|AIRP|CN-IB|cN1B 5'-nucleotidase, cytosolic IB protein-coding unique_peak2_3_5_-0.840812497356872_2.16455625204272_0.96108193396963-3 chr15 52998300 52998572 + 0.96108193396963 NA Intergenic MLT1G1|LTR|ERVL-MaLR 285991 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding unique_peak1_5_3_0.324985605591739_2.16249280279587_0.96108193396963 chr10 4325201 4325477 + 0.96108193396963 NA intron (NM_031185, intron 2 of 3) ID_B1|SINE|B4 59010 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak2_174_174_-0.294308179679135_7.30405702199276_0.960375056795035 chr19 12795780 12797193 + 0.960375056795035 NA promoter-TSS (NR_024093) promoter-TSS (NR_024093) 293 NM_001361971 107321 Mm.313136 NM_134152 ENSMUSG00000024696 Lpxn 4933402K05Rik|A530083L21Rik|AV278559|LDPL leupaxin protein-coding common_peak1_110_69_0.375458346766687_6.31701219032831_0.959986039043193 chr17 26610551 26611868 + 0.959986039043193 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 49697 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_110_69_0.375458346766687_6.31701219032831_0.959986039043193-2 chr7 90339968 90341319 + 0.959986039043193 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 38288 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_187_185_-0.279607466952465_7.3993550776318_0.959882505892456 chr7 13037112 13038929 + 0.959882505892456 NA promoter-TSS (NM_001243968) promoter-TSS (NM_001243968) -42 NM_145578 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak1_226_153_0.262805769399944_7.39818942539487_0.959882505892406 chr10 72654895 72656473 + 0.959882505892406 NA intron (NM_001293683, intron 1 of 7) intron (NM_001293683, intron 1 of 7) 838 NM_001293683 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-3 chr15 97182863 97183148 + 0.959433126956268 NA Intergenic Intergenic -15761 NR_155279 102635594 Mm.392594 NR_155278 ENSMUSG00000116295 Gm32885 - predicted gene, 32885 ncRNA unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-2 chr12 110797599 110797993 + 0.959433126956268 NA intron (NM_001347428, intron 2 of 2) intron (NM_001347428, intron 2 of 2) 43143 NM_011973 26448 Mm.140948 NM_011973 ENSMUSG00000056458 Mok RAGE1|Rage|Stk30 MOK protein kinase protein-coding common_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-4 chr17 78388545 78388962 + 0.959433126956268 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 29399 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-3 chr15 11753693 11754080 + 0.959433126956268 NA Intergenic Intergenic 151788 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268 chr10 120422361 120422694 + 0.959433126956268 NA intron (NM_001347170, intron 3 of 5) intron (NM_001347170, intron 3 of 5) 25583 NR_030434 791076 NR_030434 ENSMUSG00000076448 Mir763 Mirn763|mir-763|mmu-mir-763 microRNA 763 ncRNA common_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-2 chr15 76380567 76381016 + 0.959433126956268 NA intron (NM_175457, intron 1 of 43) CpG 278 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-5 chr5 116009891 116010487 + 0.959433126956268 NA Intergenic Intergenic 14239 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-5 chr9 102735708 102736111 + 0.959433126956268 NA Intergenic Intergenic -3739 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-6 chr6 53734236 53734734 + 0.959433126956268 NA Intergenic Intergenic 86340 NM_025817 66873 Mm.422727 NM_025817 ENSMUSG00000043496 Tril 1200009O22Rik|AI316813|mKIAA0644 TLR4 interactor with leucine-rich repeats protein-coding unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-7 chr7 98513201 98513563 + 0.959433126956268 NA Intergenic Intergenic 19160 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268 chr11 115603377 115603585 + 0.959433126956268 NA promoter-TSS (NM_025305) promoter-TSS (NM_025305) 435 NM_001252067 260302 Mm.119479 NM_173048 ENSMUSG00000020740 Gga3 C230037M19Rik|mKIAA0154 golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding unique_peak2_21_30_-0.767965928216571_4.57021334627859_0.959433126956268-4 chr19 40511329 40512114 + 0.959433126956268 NA intron (NM_009166, intron 1 of 23) intron (NM_009166, intron 1 of 23) 2015 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_21_30_-0.767965928216571_4.57021334627859_0.959433126956268 chr9 73905614 73905962 + 0.959433126956268 NA intron (NM_001081153, intron 1 of 30) intron (NM_001081153, intron 1 of 30) 27779 NM_001081153 208898 Mm.41035 NM_001081153 ENSMUSG00000062151 Unc13c 1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3 unc-13 homolog C (C. elegans) protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-7 chr17 33779140 33779656 + 0.959433126956265 NA intron (NM_020581, intron 3 of 6) intron (NM_020581, intron 3 of 6) 2177 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-7 chr7 130640807 130641316 + 0.959433126956265 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -51495 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-10 chr9 122371739 122372297 + 0.959433126956265 NA intron (NR_152865, intron 2 of 5) intron (NR_152865, intron 2 of 5) 20402 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265 chr10 77394973 77395239 + 0.959433126956265 NA intron (NM_001024838, intron 1 of 11) intron (NM_001024838, intron 1 of 11) 23167 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-3 chr11 79737531 79737869 + 0.959433126956265 NA Intergenic Intergenic 11300 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-9 chr6 112282195 112282621 + 0.959433126956265 NA intron (NM_144799, intron 1 of 5) PB1D10|SINE|Alu 7911 NR_045987 100503613 Mm.136719 NM_177012 5031434C07Rik - RIKEN cDNA 5031434C07 gene ncRNA unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-2 chr14 79482575 79483006 + 0.959433126956265 NA intron (NM_007920, intron 1 of 8) intron (NM_007920, intron 1 of 8) -1522 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-6 chr16 36072256 36072692 + 0.959433126956265 NA promoter-TSS (NM_027342) promoter-TSS (NM_027342) 814 NM_001159421 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-2 chr10 79985701 79986207 + 0.959433126956265 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1694 NM_001003949 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-4 chr2 122148806 122149320 + 0.959433126956265 NA intron (NM_009735, intron 1 of 3) intron (NM_009735, intron 1 of 3) 1376 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-8 chr6 88084579 88085058 + 0.959433126956265 NA intron (NM_133933, intron 1 of 9) CpG 345 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-8 chr4 135273119 135273473 + 0.959433126956265 NA promoter-TSS (NM_013885) promoter-TSS (NM_013885) -536 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-6 chr3 142526827 142527209 + 0.959433126956265 NA Intergenic Intergenic -3318 NM_001083312 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-4 chr11 84829201 84829475 + 0.959433126956265 NA promoter-TSS (NM_177564) promoter-TSS (NM_177564) 160 NR_046281 74995 Mm.84413 NR_046281 ENSMUSG00000086799 4930502E09Rik - RIKEN cDNA 4930502E09 gene ncRNA unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265 chr10 127059453 127060078 + 0.959433126956265 NA 5' UTR (NM_001033262, exon 1 of 4) 5' UTR (NM_001033262, exon 1 of 4) 419 NM_001033262 216438 Mm.37892 NM_001033262 ENSMUSG00000040502 March9 AI608492|BC019560 membrane-associated ring finger (C3HC4) 9 protein-coding unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-6 chr7 99304264 99304949 + 0.959433126956265 NA intron (NM_001048167, intron 1 of 2) IMPB_01|Satellite|Satellite 36260 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-4 chr3 95686425 95687099 + 0.959433126956265 NA intron (NM_001301705, intron 1 of 17) intron (NM_001301705, intron 1 of 17) 1155 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-7 chr3 143597673 143598161 + 0.959433126956265 NA Intergenic Intergenic 114226 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-2 chr10 86104460 86104716 + 0.959433126956265 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 8734 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-3 chr16 76471556 76471918 + 0.959433126956265 NA Intergenic Intergenic -77058 NR_155449 102632730 NR_155449 Gm30726 - predicted gene, 30726 ncRNA common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265 chr1 162077003 162077953 + 0.959433126956265 NA intron (NM_001038619, intron 16 of 20) intron (NM_001038619, intron 16 of 20) 72509 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-8 chr9 69334075 69334581 + 0.959433126956265 NA intron (NM_001289916, intron 1 of 9) intron (NM_001289916, intron 1 of 9) 29919 NR_136934 102642202 Mm.415363 NR_136934 ENSMUSG00000086648 Gm15511 - predicted gene 15511 ncRNA common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-5 chr3 95929389 95929833 + 0.959433126956265 NA exon (NM_001253758, exon 1 of 5) exon (NM_001253758, exon 1 of 5) 354 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-9 chr5 77406257 77406639 + 0.959433126956265 NA intron (NM_001159518, intron 1 of 5) intron (NM_001159518, intron 1 of 5) 1597 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-5 chr15 83574630 83575336 + 0.959433126956265 NA TTS (NM_183017) TTS (NM_183017) 11410 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-3 chr17 87202603 87203235 + 0.959433126956265 NA Intergenic Intergenic -7977 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak1_35_18_0.643783735229119_4.56981938105814_0.959433126956265-5 chr6 140546710 140547318 + 0.959433126956265 NA intron (NM_144920, intron 11 of 30) intron (NM_144920, intron 11 of 30) -75649 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_35_18_0.643783735229119_4.56981938105814_0.959433126956265-10 chr9 32713910 32714291 + 0.959433126956265 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 18058 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_240_232_-0.24886211854599_7.73975508538128_0.959337482768279 chr15 85668813 85670690 + 0.959337482768279 NA Intergenic Intergenic -34022 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_240_232_-0.24886211854599_7.73975508538128_0.959337482768279-2 chr8 110845549 110847511 + 0.959337482768279 NA promoter-TSS (NM_001310607) promoter-TSS (NM_001310607) -70 NM_001310607 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding common_peak1_384_357_-0.197434385485677_8.38509858452142_0.958810794000644 chr16 37787499 37791025 + 0.958810794000644 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 12207 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak2_349_327_-0.207704052038133_8.25369997859902_0.958701581428135 chr5 5690774 5694633 + 0.958701581428135 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 1386 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak2_110_116_-0.365623355871752_6.68755304164753_0.958271040068181 chr2 91649371 91650654 + 0.958271040068181 NA promoter-TSS (NM_001033451) promoter-TSS (NM_001033451) -106 NR_027372 228359 Mm.22413 NM_146124 ENSMUSG00000027247 Arhgap1 B230365D05Rik|C76222|Cdc42GAP|p50rhoGAP Rho GTPase activating protein 1 protein-coding common_peak1_141_91_0.334003806076475_6.69056385909525_0.958271040068181 chr12 101912157 101913545 + 0.958271040068181 NA non-coding (NR_152255, exon 1 of 2) non-coding (NR_152255, exon 1 of 2) 184 NR_152255 100504056 Mm.416837 NR_152255 Gm20036 - predicted gene, 20036 ncRNA common_peak1_141_91_0.334003806076475_6.69056385909525_0.958271040068181-2 chr15 64621613 64623436 + 0.958271040068181 NA Intergenic Intergenic -239605 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_110_116_-0.365623355871752_6.68755304164753_0.958271040068181 chr8 35666178 35666940 + 0.958271040068181 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -77539 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_110_116_-0.365623355871752_6.68755304164753_0.958271040068181-2 chr2 126151545 126153054 + 0.958271040068181 NA promoter-TSS (NM_029455) promoter-TSS (NM_029455) 158 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak2_301_208_0.231183792602912_7.82295102838234_0.957996861199474 chr8 20424020 20424779 + 0.957996861199474 NA intron (NR_028428, intron 1 of 5) CpG 415 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo common_peak1_200_134_0.278518043243768_7.21607461867271_0.957956069512942 chr5 129500810 129502183 + 0.957956069512942 NA exon (NM_172276, exon 1 of 18) exon (NM_172276, exon 1 of 18) 265 NM_172276 231769 Mm.288714 NM_172276 ENSMUSG00000029439 Sfswap 1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8 splicing factor SWAP protein-coding common_peak2_54_30_0.544635990964064_5.22651430586891_0.956885677565404-2 chr19 10042528 10042827 + 0.956885677565404 NA intron (NM_021890, intron 1 of 11) intron (NM_021890, intron 1 of 11) 1129 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding common_peak1_54_30_0.544635990964064_5.22651430586891_0.956885677565404-3 chr5 112295412 112296319 + 0.956885677565404 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 19174 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_54_30_0.544635990964064_5.22651430586891_0.956885677565404 chr3 61343066 61344022 + 0.956885677565404 NA Intergenic IMPB_01|Satellite|Satellite -20963 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_54_30_0.544635990964064_5.22651430586891_0.956885677565404-5 chr7 99483199 99483571 + 0.956885677565404 NA promoter-TSS (NR_002172) promoter-TSS (NR_002172) 324 NM_012052 27050 Mm.236868 NM_012052 ENSMUSG00000030744 Rps3 D7Ertd795e|Rs_3 ribosomal protein S3 protein-coding common_peak1_54_30_0.544635990964064_5.22651430586891_0.956885677565404-2 chr5 45493478 45494000 + 0.956885677565404 NA intron (NM_024434, intron 1 of 12) CpG 365 NM_024434 66988 Mm.286830 NM_024434 ENSMUSG00000039682 Lap3 2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps leucine aminopeptidase 3 protein-coding common_peak2_54_30_0.544635990964064_5.22651430586891_0.956885677565404-4 chr3 122121522 122122086 + 0.956885677565404 NA exon (NM_007378, exon 19 of 50) exon (NM_007378, exon 19 of 50) 77344 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_54_30_0.544635990964064_5.22651430586891_0.956885677565404 chr16 23167497 23168014 + 0.956885677565404 NA Intergenic Intergenic -7525 NR_155420 105246089 Mm.390905 NR_155420 C730014E05Rik - RIKEN cDNA C730014E05 gene ncRNA unique_peak1_54_30_0.544635990964064_5.22651430586891_0.956885677565404 chr15 75266913 75267597 + 0.956885677565404 NA Intergenic Intergenic -1166 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding common_peak2_54_30_0.544635990964064_5.22651430586891_0.956885677565404-3 chr2 154436552 154436898 + 0.956885677565404 NA intron (NM_172860, intron 1 of 10) CpG 241 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding unique_peak1_35_45_-0.631850707384308_5.20763660236486_0.956885677565398 chr5 137070781 137071404 + 0.956885677565398 NA exon (NM_008871, exon 2 of 9) exon (NM_008871, exon 2 of 9) 1180 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398 chr2 148187014 148187733 + 0.956885677565398 NA Intergenic Intergenic -140404 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398-3 chr8 107255476 107255811 + 0.956885677565398 NA promoter-TSS (NR_039557).5 promoter-TSS (NR_039557).5 -521 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398-4 chr9 108479946 108480318 + 0.956885677565398 NA exon (NM_008483, exon 2 of 33) exon (NM_008483, exon 2 of 33) 270 NM_008483 16779 Mm.27560 NM_008483 ENSMUSG00000052911 Lamb2 AW211941|Lamb-2|Lams|npht laminin, beta 2 protein-coding common_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398-2 chr7 45126467 45127318 + 0.956885677565398 NA promoter-TSS (NR_000003) promoter-TSS (NR_000003) 53 NR_001277 27208 NR_001277 ENSMUSG00000065628 Snord33 Rnu33|U33 small nucleolar RNA, C/D box 33 snoRNA common_peak1_35_45_-0.631850707384308_5.20763660236486_0.956885677565398-2 chr8 13648724 13648997 + 0.956885677565398 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 28727 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_35_45_-0.631850707384308_5.20763660236486_0.956885677565398 chr11 101645914 101646161 + 0.956885677565398 NA Intergenic CpG 18088 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding unique_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398-2 chr8 125013109 125013487 + 0.956885677565398 NA intron (NM_016909, intron 1 of 5) CpG 301 NM_016909 53424 Mm.5248 NM_016909 ENSMUSG00000056820 Tsnax R74833|Trax translin-associated factor X protein-coding unique_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398 chr13 5373521 5374399 + 0.956885677565398 NA Intergenic Intergenic 484132 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_35_45_-0.631850707384308_5.20763660236486_0.956885677565398-3 chr8 126811560 126812242 + 0.956885677565398 NA Intergenic Intergenic -37119 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_214_144_0.271880379801888_7.31584927991588_0.956228099050736 chr19 9072889 9074877 + 0.956228099050736 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 14073 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_188_186_-0.279743538986591_7.40702269039434_0.95599536039865 chr14 7870507 7871620 + 0.95599536039865 NA intron (NM_001081427, intron 3 of 45) intron (NM_001081427, intron 3 of 45) 53106 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_76_45_0.457272496114176_5.7521982041141_0.955521670249481 chr12 70476768 70477515 + 0.955521670249481 NA intron (NR_037248, intron 2 of 4) intron (NR_037248, intron 2 of 4) 23987 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak2_76_45_0.457272496114176_5.7521982041141_0.955521670249481 chr6 149188099 149188630 + 0.955521670249481 NA non-coding (NR_153963, exon 1 of 5) non-coding (NR_153963, exon 1 of 5) 348 NM_001356344 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak1_54_63_-0.501167698649061_5.74941615067547_0.955521670249469 chr9 70012568 70013097 + 0.955521670249469 NA 5' UTR (NM_001282083, exon 1 of 5) 5' UTR (NM_001282083, exon 1 of 5) 284 NR_104093 235459 Mm.293117 NM_199151 ENSMUSG00000033543 Gtf2a2 TFIIA-gamma|TfIIg|Tfiia2 general transcription factor II A, 2 protein-coding common_peak2_54_63_-0.501167698649061_5.74941615067547_0.955521670249469-2 chr19 46961563 46962015 + 0.955521670249469 NA intron (NM_001164363, intron 1 of 17) CpG 562 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_54_63_-0.501167698649061_5.74941615067547_0.955521670249469 chr11 35934690 35935714 + 0.955521670249469 NA intron (NM_170779, intron 1 of 22) MTE2b|LTR|ERVL-MaLR 44887 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_352_246_0.213707112626194_8.05522078789777_0.954721130273628 chr2 173273410 173276206 + 0.954721130273628 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 1725 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_76_84_-0.428556483966513_6.19511269415445_0.954705795061059 chr10 43478846 43479929 + 0.954705795061059 NA intron (NM_199028, intron 1 of 3) CpG 247 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak1_76_84_-0.428556483966513_6.19511269415445_0.954705795061059 chr10 24588801 24589318 + 0.954705795061059 NA Intergenic Intergenic -6383 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_76_84_-0.428556483966513_6.19511269415445_0.954705795061059-2 chr5 151111543 151112702 + 0.954705795061059 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 78071 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_102_63_0.397587365058227_6.19879368252911_0.954705795061059 chr11 52003449 52004790 + 0.954705795061059 NA promoter-TSS (NM_153785) promoter-TSS (NM_153785) -102 NM_001166657 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding common_peak2_102_108_-0.370596959718699_6.58288584491758_0.954178873855474 chr1 135818455 135819557 + 0.954178873855474 NA exon (NM_133664, exon 1 of 10) exon (NM_133664, exon 1 of 10) 408 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding common_peak2_131_84_0.343565089113568_6.58117348069449_0.954178873855474 chr17 24894530 24896019 + 0.954178873855474 NA promoter-TSS (NM_001163102) promoter-TSS (NM_001163102) 154 NM_023260 79044 Mm.328851 NM_023260 ENSMUSG00000038880 Mrps34 0610007F04Rik|5330430D13Rik|AV001970|Tce2 mitochondrial ribosomal protein S34 protein-coding common_peak1_102_108_-0.370596959718699_6.58288584491758_0.954178873855474 chr11 59449832 59451144 + 0.954178873855474 NA promoter-TSS (NM_001356452) promoter-TSS (NM_001356452) 443 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak2_164_108_0.304428599228224_6.92039862439104_0.953818797037946 chr8 126840049 126841918 + 0.953818797037946 NA Intergenic Intergenic -8037 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_153_155_-0.311622746264304_7.1295908457301_0.952084785123399 chr7 141228433 141229972 + 0.952084785123399 NA intron (NM_001081118, intron 1 of 17) intron (NM_001081118, intron 1 of 17) 414 NM_001081118 101471 Mm.248656 NM_207211 ENSMUSG00000038611 Phrf1 AA673488 PHD and ring finger domains 1 protein-coding common_peak1_153_155_-0.311622746264304_7.1295908457301_0.952084785123399 chr2 61593183 61594498 + 0.952084785123399 NA intron (NR_149324, intron 1 of 9) intron (NR_149324, intron 1 of 9) 743 NR_149323 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak1_121_126_-0.348583597042533_6.8143928882509_0.951990453224038 chr1 64121805 64122749 + 0.951990453224038 NA promoter-TSS (NM_033563) promoter-TSS (NM_033563) -888 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak2_112_117_-0.35232034770159_6.70648287551105_0.951951232317808 chr8 12572324 12573897 + 0.951951232317808 NA promoter-TSS (NM_001357297) promoter-TSS (NM_001357297) 74 NM_024279 78634 Mm.116871 NM_024279 ENSMUSG00000010435 Spaca7 1700094C09Rik sperm acrosome associated 7 protein-coding common_peak1_142_92_0.328459742153102_6.70338868218458_0.951951232317783 chr18 32377250 32379112 + 0.951951232317783 NA non-coding (NR_045403, exon 1 of 3) non-coding (NR_045403, exon 1 of 3) 103 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_142_92_0.328459742153102_6.70338868218458_0.951951232317783-2 chr3 107695412 107696521 + 0.951951232317783 NA promoter-TSS (NM_001357112) promoter-TSS (NM_001357112) 90 NM_001357113 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak1_121_77_0.354698870867383_6.46275165429594_0.951856920429998-2 chr19 10108715 10109630 + 0.951856920429998 NA Intergenic Intergenic -7669 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_121_77_0.354698870867383_6.46275165429594_0.951856920429998 chr10 125966285 125967461 + 0.951856920429998 NA intron (NM_177152, intron 1 of 18) CpG 654 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding common_peak2_84_92_-0.416726034590945_6.33079579381256_0.951799854111839 chr17 6172518 6173486 + 0.951799854111839 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 34854 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_111_70_0.367842015140754_6.33366812707506_0.951799854111839 chr8 72723325 72724173 + 0.951799854111839 NA intron (NM_001113248, intron 1 of 6) CpG 479 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding common_peak2_85_92_-0.399971260471842_6.33917318087211_0.951799854111839 chr11 23305629 23306713 + 0.951799854111839 NA promoter-TSS (NM_001190401) promoter-TSS (NM_001190401) -724 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak2_68_77_-0.46171331483854_6.05454556144298_0.951659045366392 chr16 55973808 55974554 + 0.951659045366392 NA non-coding (NR_027965, exon 1 of 1) non-coding (NR_027965, exon 1 of 1) 377 NM_173026 271377 Mm.282814 NM_173026 ENSMUSG00000022601 Zbtb11 9230110G02Rik|ZNF-U69274 zinc finger and BTB domain containing 11 protein-coding common_peak2_69_77_-0.44110120588969_6.0648516159174_0.951659045366392-2 chr15 6278516 6279566 + 0.951659045366392 NA Intergenic Intergenic -20748 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_68_77_-0.46171331483854_6.05454556144298_0.951659045366392-3 chr5 145114254 145114954 + 0.951659045366392 NA intron (NM_023142, intron 1 of 9) CpG 348 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak1_68_77_-0.46171331483854_6.05454556144298_0.951659045366392 chr5 4757233 4757939 + 0.951659045366392 NA 5' UTR (NM_021457, exon 1 of 1) 5' UTR (NM_021457, exon 1 of 1) 630 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding common_peak2_68_77_-0.46171331483854_6.05454556144298_0.951659045366392-4 chr9 67077554 67078608 + 0.951659045366392 NA Intergenic Intergenic -24219 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak2_69_77_-0.44110120588969_6.0648516159174_0.951659045366392-3 chr17 28621533 28622461 + 0.951659045366392 NA exon (NM_016795, exon 2 of 16) exon (NM_016795, exon 2 of 16) 524 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding common_peak2_68_77_-0.46171331483854_6.05454556144298_0.951659045366392-2 chr3 122419677 122420930 + 0.951659045366392 NA intron (NM_013867, intron 1 of 11) intron (NM_013867, intron 1 of 11) 546 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_69_77_-0.44110120588969_6.0648516159174_0.951659045366392 chr1 86441743 86443024 + 0.951659045366392 NA Intergenic CpG 16054 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak2_61_70_-0.479297579951901_5.91009832952873_0.951571444707976 chr10 41450364 41450984 + 0.951571444707976 NA intron (NR_102360, intron 1 of 6) CpG 316 NR_102360 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak1_61_70_-0.479297579951901_5.91009832952873_0.951571444707976 chr1 132309322 132310097 + 0.951571444707976 NA Intergenic Intergenic -6416 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_85_51_0.438747832495097_5.91981363438864_0.951571444707963 chr1 62713394 62714039 + 0.951571444707963 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 10399 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_84_51_0.421993058375994_5.91143624732909_0.951571444707963-2 chr3 122510969 122511989 + 0.951571444707963 NA intron (NM_013867, intron 6 of 11) MIRb|SINE|MIR 27910 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak1_84_51_0.421993058375994_5.91143624732909_0.951571444707963 chr12 8808828 8809982 + 0.951571444707963 NA Intergenic Intergenic 38009 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak2_85_51_0.438747832495097_5.91981363438864_0.951571444707963-2 chr10 94380942 94381762 + 0.951571444707963 NA intron (NM_001359762, intron 1 of 4) intron (NM_001359762, intron 1 of 4) 69403 NM_001359762 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_69_40_0.486749008354475_5.60092650879532_0.951347777694914 chr16 18416581 18417152 + 0.951347777694914 NA intron (NM_007744, intron 1 of 4) intron (NM_007744, intron 1 of 4) -3372 NM_001111063 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding common_peak2_68_40_0.466136899405625_5.5906204543209_0.951347777694914 chr19 45006630 45007075 + 0.951347777694914 NA promoter-TSS (NM_053164) promoter-TSS (NM_053164) 294 NM_153796 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding common_peak1_69_40_0.486749008354475_5.60092650879532_0.951347777694914-5 chr8 83738014 83738552 + 0.951347777694914 NA intron (NM_011925, intron 1 of 19) intron (NM_011925, intron 1 of 19) 3028 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_69_40_0.486749008354475_5.60092650879532_0.951347777694914-2 chr17 46645074 46646004 + 0.951347777694914 NA promoter-TSS (NM_001316742) promoter-TSS (NM_001316742) 541 NM_001357130 74764 Mm.279599 NM_029091 ENSMUSG00000003546 Klc4 1200014P03Rik|AA408085|AW146303|Knsl8 kinesin light chain 4 protein-coding common_peak1_68_40_0.466136899405625_5.5906204543209_0.951347777694914-3 chr6 13677023 13677880 + 0.951347777694914 NA intron (NM_175312, intron 1 of 4) intron (NM_175312, intron 1 of 4) 515 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding common_peak1_48_57_-0.524622851761517_5.59566956924681_0.951347777694914 chr4 133605278 133605887 + 0.951347777694914 NA Intergenic Intergenic -3414 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_47_57_-0.554160328255566_5.58090083099979_0.951347777694914 chr3 96575875 96576817 + 0.951347777694914 NA Intergenic Intergenic -9545 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 - predicted gene 15441 ncRNA common_peak1_48_57_-0.524622851761517_5.59566956924681_0.951347777694914-2 chr7 126474953 126475671 + 0.951347777694914 NA promoter-TSS (NM_001289541) promoter-TSS (NM_001289541) -182 NM_011363 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding unique_peak2_48_57_-0.524622851761517_5.59566956924681_0.951347777694914 chr15 90224455 90225174 + 0.951347777694914 NA TTS (NR_106106) TTS (NR_106106) 454 NR_106106 102466838 NR_106106 ENSMUSG00000099319 Mir7648 Gm27736|mmu-mir-7648 microRNA 7648 ncRNA common_peak2_69_40_0.486749008354475_5.60092650879532_0.951347777694914 chr19 16956172 16956637 + 0.951347777694914 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 286 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_69_40_0.486749008354475_5.60092650879532_0.951347777694914-4 chr6 117917300 117917969 + 0.951347777694914 NA intron (NM_001166431, intron 2 of 2) intron (NM_001166431, intron 2 of 2) 340 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_48_57_-0.524622851761517_5.59566956924681_0.951347777694914-3 chr8 27086418 27086968 + 0.951347777694914 NA intron (NM_054044, intron 1 of 18) intron (NM_054044, intron 1 of 18) 852 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak1_68_40_0.466136899405625_5.5906204543209_0.951347777694914-2 chr12 111039348 111040229 + 0.951347777694914 NA promoter-TSS (NM_198023) promoter-TSS (NM_198023) -10 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak2_47_57_-0.554160328255566_5.58090083099979_0.951347777694914-3 chr7 70036746 70037959 + 0.951347777694914 NA Intergenic Intergenic 300470 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA common_peak2_48_57_-0.524622851761517_5.59566956924681_0.951347777694914 chr19 59843345 59844363 + 0.951347777694914 NA Intergenic Intergenic 99510 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_47_57_-0.554160328255566_5.58090083099979_0.951347777694914-2 chr4 86634573 86635141 + 0.951347777694914 NA Intergenic Intergenic -22802 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak2_69_40_0.486749008354475_5.60092650879532_0.951347777694914-2 chr4 12171200 12171644 + 0.951347777694914 NA intron (NM_001310743, intron 1 of 7) CpG 593 NM_001310743 68099 Mm.25340 NM_026558 ENSMUSG00000028218 Fam92a 6720467C03Rik|Fam92a1 family with sequence similarity 92, member A protein-coding common_peak1_69_40_0.486749008354475_5.60092650879532_0.951347777694914-3 chr18 8895493 8896800 + 0.951347777694914 NA Intergenic Intergenic -316710 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak1_68_40_0.466136899405625_5.5906204543209_0.951347777694914 chr11 62005017 62005982 + 0.951347777694914 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 48736 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_41_51_-0.587905022121712_5.40648720708024_0.951203349073955-2 chr16 32099306 32100014 + 0.951203349073955 NA promoter-TSS (NM_025892) promoter-TSS (NM_025892) 67 NM_001111025 72084 Mm.37613 NM_024464 ENSMUSG00000023791 Pigx 2010319C14Rik|PIG-X phosphatidylinositol glycan anchor biosynthesis, class X protein-coding common_peak2_41_51_-0.587905022121712_5.40648720708024_0.951203349073955 chr10 63024108 63024815 + 0.951203349073955 NA promoter-TSS (NM_001079824) promoter-TSS (NM_001079824) -51 NM_026085 67307 Mm.368563 NM_026085 ENSMUSG00000020072 Pbld2 3110049J23Rik|Mawbp phenazine biosynthesis-like protein domain containing 2 protein-coding common_peak2_42_51_-0.55419718793166_5.42334112417526_0.951203349073955-2 chr3 36552181 36553027 + 0.951203349073955 NA promoter-TSS (NM_019393) promoter-TSS (NM_019393) -2 NM_019393 50911 Mm.116711 NM_019393 ENSMUSG00000027714 Exosc9 PM/Scl-75|Pmscl1|RRP45|p5|p6 exosome component 9 protein-coding common_peak1_41_51_-0.587905022121712_5.40648720708024_0.951203349073955-3 chr2 132577281 132577883 + 0.951203349073955 NA intron (NM_001355651, intron 1 of 19) CpG 666 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding common_peak1_41_51_-0.587905022121712_5.40648720708024_0.951203349073955-2 chr13 69809901 69810342 + 0.951203349073955 NA intron (NM_138596, intron 1 of 3) CpG 239 NM_138596 28077 Mm.52583 NM_138596 ENSMUSG00000021598 Med10 AA959813|AI385605|C78613|D13Wsu50e mediator complex subunit 10 protein-coding common_peak2_42_51_-0.55419718793166_5.42334112417526_0.951203349073955 chr11 103953187 103953996 + 0.951203349073955 NA intron (NM_008740, intron 1 of 20) intron (NM_008740, intron 1 of 20) 465 NM_008740 18195 Mm.260117 NM_008740 ENSMUSG00000034187 Nsf AI316878|AU020090|AU067812|SKD2 N-ethylmaleimide sensitive fusion protein protein-coding common_peak2_41_51_-0.587905022121712_5.40648720708024_0.951203349073955-3 chr19 5796424 5797332 + 0.951203349073955 NA promoter-TSS (NR_144621) promoter-TSS (NR_144621) -897 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA common_peak2_41_51_-0.587905022121712_5.40648720708024_0.951203349073955-4 chr8 70234636 70235102 + 0.951203349073955 NA promoter-TSS (NM_133972) promoter-TSS (NM_133972) -447 NM_133972 76813 Mm.383251 NM_133972 ENSMUSG00000002343 Armc6 2410153K17Rik|AW554412 armadillo repeat containing 6 protein-coding common_peak1_41_51_-0.587905022121712_5.40648720708024_0.951203349073955 chr11 76846123 76846562 + 0.951203349073955 NA exon (NM_007754, exon 1 of 21) exon (NM_007754, exon 1 of 21) 666 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding common_peak1_61_35_0.500524538110469_5.42018727049755_0.951203349073949-4 chr7 84328658 84329339 + 0.951203349073949 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 81040 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_61_35_0.500524538110469_5.42018727049755_0.951203349073949-2 chr2 91070788 91071421 + 0.951203349073949 NA promoter-TSS (NM_026721) promoter-TSS (NM_026721) -789 NM_001290765 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_61_35_0.500524538110469_5.42018727049755_0.951203349073949 chr2 33205323 33205990 + 0.951203349073949 NA intron (NM_001290570, intron 7 of 16) MIRb|SINE|MIR -10305 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak1_61_35_0.500524538110469_5.42018727049755_0.951203349073949-3 chr3 122924451 122925052 + 0.951203349073949 NA promoter-TSS (NR_046036) promoter-TSS (NR_046036) 354 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik|Aln RIKEN cDNA 1810037I17 gene protein-coding common_peak1_31_40_-0.634566939973532_5.04026853463132_0.950816664083192 chr16 85898810 85899301 + 0.950816664083192 NA intron (NM_011782, intron 1 of 7) intron (NM_011782, intron 1 of 7) 2070 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak2_30_40_-0.680047485492057_5.01752826187206_0.950816664083192-4 chr7 90040456 90041650 + 0.950816664083192 NA intron (NR_110365, intron 4 of 5) MIR3|SINE|MIR 11894 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15|Gm26529|Gm32094 RIKEN cDNA E230029C05 gene ncRNA common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-7 chr17 72965352 72965960 + 0.950816664083192 NA Intergenic Intergenic 47351 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-11 chr7 28357863 28358843 + 0.950816664083192 NA Intergenic Intergenic 6813 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak1_30_40_-0.680047485492057_5.01752826187206_0.950816664083192 chr10 71153825 71154582 + 0.950816664083192 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 5487 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_30_40_-0.680047485492057_5.01752826187206_0.950816664083192-2 chr14 20929498 20929811 + 0.950816664083192 NA exon (NM_009502, exon 1 of 21) exon (NM_009502, exon 1 of 21) 256 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_30_40_-0.680047485492057_5.01752826187206_0.950816664083192-3 chr15 84988175 84988636 + 0.950816664083192 NA promoter-TSS (NM_001033273) promoter-TSS (NM_001033273) -434 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding unique_peak1_30_40_-0.680047485492057_5.01752826187206_0.950816664083192 chr5 21646006 21646475 + 0.950816664083192 NA promoter-TSS (NM_177076) promoter-TSS (NM_177076) 256 NM_026034 67211 Mm.260782 NM_026034 ENSMUSG00000038525 Armc10 2810037C14Rik|Svh armadillo repeat containing 10 protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-8 chr18 74216133 74216607 + 0.950816664083192 NA 5' UTR (NM_028868, exon 1 of 15) 5' UTR (NM_028868, exon 1 of 15) 158 NM_028868 74322 Mm.17537 NM_028868 ENSMUSG00000024560 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18 CXXC finger 1 (PHD domain) protein-coding unique_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192 chr6 51118108 51118968 + 0.950816664083192 NA Intergenic B4|SINE|B4 151372 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-6 chr15 102044868 102045480 + 0.950816664083192 NA Intergenic Intergenic 16958 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak2_30_40_-0.680047485492057_5.01752826187206_0.950816664083192 chr10 31467458 31467983 + 0.950816664083192 NA Intergenic B3A|SINE|B2 -21762 NM_001359366 21987 Mm.439966 NM_009413 ENSMUSG00000000296 Tpd52l1 D53 tumor protein D52-like 1 protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-3 chr12 57230533 57230933 + 0.950816664083192 NA intron (NM_001164370, intron 1 of 9) CpG 308 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-4 chr12 69744463 69745117 + 0.950816664083192 NA TTS (NM_001361690) TTS (NM_001361690) 19154 NR_030450 751538 NR_030450 ENSMUSG00000076065 Mir681 Mirn681|mmu-mir-681 microRNA 681 ncRNA common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-10 chr6 134792254 134792600 + 0.950816664083192 NA promoter-TSS (NR_151454) promoter-TSS (NR_151454) 67 NR_151454 105242798 Mm.398227 NR_151454 1700055D16Rik - RIKEN cDNA 1700055D16 gene ncRNA common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192 chr1 64826931 64827563 + 0.950816664083192 NA intron (NM_001039493, intron 6 of 7) PB1D7|SINE|Alu -89497 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-2 chr1 189777637 189778438 + 0.950816664083192 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 49769 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-5 chr12 102270880 102271406 + 0.950816664083192 NA Intergenic Intergenic -11931 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_30_40_-0.680047485492057_5.01752826187206_0.950816664083192-2 chr15 83575146 83575794 + 0.950816664083192 NA 3' UTR (NM_183017, exon 14 of 14) 3' UTR (NM_183017, exon 14 of 14) 11897 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak2_31_40_-0.634566939973532_5.04026853463132_0.950816664083192-9 chr2 181601029 181601627 + 0.950816664083192 NA promoter-TSS (NM_133701) promoter-TSS (NM_133701) 9 NM_133701 68879 Mm.292001 NM_133701 ENSMUSG00000002455 Prpf6 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K pre-mRNA splicing factor 6 protein-coding common_peak1_48_26_0.578470641202586_5.04412282276476_0.950816664083185-2 chr19 53410251 53410645 + 0.950816664083185 NA Intergenic Intergenic -19814 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak1_48_26_0.578470641202586_5.04412282276476_0.950816664083185 chr11 101081686 101082395 + 0.950816664083185 NA promoter-TSS (NM_001305982) promoter-TSS (NM_001305982) -525 NM_001305982 71743 Mm.182271 NM_027896 ENSMUSG00000001755 Coasy 1300003G02Rik|Dpck|Ppat|Ukr1 Coenzyme A synthase protein-coding common_peak2_47_26_0.548933164708537_5.02935408451774_0.950816664083185-2 chr14 64949429 64949907 + 0.950816664083185 NA promoter-TSS (NM_001253731) promoter-TSS (NM_001253731) 189 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding common_peak2_48_26_0.578470641202586_5.04412282276476_0.950816664083185 chr1 77470424 77471058 + 0.950816664083185 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 26027 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak2_47_26_0.548933164708537_5.02935408451774_0.950816664083185-3 chr6 147091463 147091918 + 0.950816664083185 NA exon (NM_001081237, exon 1 of 3) exon (NM_001081237, exon 1 of 3) 615 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding common_peak2_47_26_0.548933164708537_5.02935408451774_0.950816664083185 chr13 46929938 46930309 + 0.950816664083185 NA promoter-TSS (NM_010617) promoter-TSS (NM_010617) -405 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding unique_peak1_48_26_0.578470641202586_5.04412282276476_0.950816664083185-3 chr8 123213023 123213368 + 0.950816664083185 NA promoter-TSS (NM_145606) promoter-TSS (NM_145606) 337 NM_177279 320869 Mm.258354 NM_177279 ENSMUSG00000048478 Spata33 4732415M23Rik|AI847264 spermatogenesis associated 33 protein-coding unique_peak1_47_26_0.548933164708537_5.02935408451774_0.950816664083185 chr3 120492593 120493270 + 0.950816664083185 NA intron (NR_130170, intron 12 of 18) intron (NR_130170, intron 12 of 18) 393801 NR_130170 320739 Mm.388474 NR_130170 6530403H02Rik - RIKEN cDNA 6530403H02 gene ncRNA common_peak1_47_26_0.548933164708537_5.02935408451774_0.950816664083185 chr14 73524892 73525265 + 0.950816664083185 NA exon (NM_001360484, exon 1 of 3) exon (NM_001360484, exon 1 of 3) 171 NM_001360484 214254 Mm.386852 NM_172527 ENSMUSG00000033405 Nudt15 6530403O17|A730068G11Rik|MTH2 nudix (nucleoside diphosphate linked moiety X)-type motif 15 protein-coding common_peak2_48_26_0.578470641202586_5.04412282276476_0.950816664083185-2 chr2 4401127 4401689 + 0.950816664083185 NA 5' UTR (NM_001177843, exon 1 of 24) 5' UTR (NM_001177843, exon 1 of 24) 432 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_48_26_0.578470641202586_5.04412282276476_0.950816664083185-2 chr2 34772218 34772869 + 0.950816664083185 NA intron (NM_001163434, intron 2 of 8) CpG 453 NM_022310 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak1_47_26_0.548933164708537_5.02935408451774_0.950816664083185-2 chr5 107986609 107986978 + 0.950816664083185 NA intron (NM_026062, intron 1 of 4) CpG 284 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_48_26_0.578470641202586_5.04412282276476_0.950816664083185-3 chr7 25718529 25719018 + 0.950816664083185 NA intron (NM_028771, intron 1 of 4) intron (NM_028771, intron 1 of 4) 280 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_48_26_0.578470641202586_5.04412282276476_0.950816664083185 chr1 161463329 161463719 + 0.950816664083185 NA Intergenic Intergenic -31133 NM_183391 240873 Mm.276823 NM_183391 ENSMUSG00000066755 Tnfsf18 Gitrl|Tnlg2a tumor necrosis factor (ligand) superfamily, member 18 protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-4 chr19 55621130 55621734 + 0.950553505527076 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 80772 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_41_22_0.588972739962367_4.8180483260382_0.950553505527076-3 chr3 87165712 87166196 + 0.950553505527076 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 8793 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_41_22_0.588972739962367_4.8180483260382_0.950553505527076 chr15 77881348 77881683 + 0.950553505527076 NA Intergenic Intergenic -39340 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_42_22_0.622680574152419_4.83490224313322_0.950553505527076 chr11 119300221 119300559 + 0.950553505527076 NA promoter-TSS (NM_138669) promoter-TSS (NM_138669) -347 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-7 chr19 37264146 37264461 + 0.950553505527076 NA promoter-TSS (NR_040298) promoter-TSS (NR_040298) -208 NR_040298 77059 Mm.251476 NR_040298 4931408D14Rik - RIKEN cDNA 4931408D14 gene ncRNA common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076 chr11 101095499 101096001 + 0.950553505527076 NA promoter-TSS (NM_008949) promoter-TSS (NM_008949) -315 NM_008949 19183 Mm.18344 NM_008949 ENSMUSG00000019303 Psmc3ip C79099|GT198|HOP2|Tbpip proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-7 chr7 30280605 30280920 + 0.950553505527076 NA promoter-TSS (NM_146186) promoter-TSS (NM_146186) -341 NM_146186 233064 Mm.271677 NM_146186 ENSMUSG00000037020 Wdr62 2310038K02Rik|b2b1508Clo WD repeat domain 62 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-5 chr18 5740772 5741221 + 0.950553505527076 NA intron (NM_001360982, intron 2 of 7) intron (NM_001360982, intron 2 of 7) 148349 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-10 chr9 31279876 31280266 + 0.950553505527076 NA Intergenic Intergenic 8670 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-4 chr16 20610512 20610810 + 0.950553505527076 NA promoter-TSS (NM_177940) promoter-TSS (NM_177940) 100 NM_001357404 208624 Mm.24950 NM_145939 ENSMUSG00000033809 Alg3 D16Ertd36e|not asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-6 chr2 167867583 167867993 + 0.950553505527076 NA Intergenic Intergenic -64539 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-8 chr4 134244989 134245356 + 0.950553505527076 NA intron (NR_040436, intron 4 of 4) intron (NR_040436, intron 4 of 4) 419 NM_024215 68040 Mm.300404 NM_024215 ENSMUSG00000028840 Zfp593 3110024A21Rik|AV062409|E130106C14Rik|ZNF593 zinc finger protein 593 protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-3 chr15 85664424 85664851 + 0.950553505527076 NA Intergenic Intergenic -39136 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076 chr10 79793715 79794256 + 0.950553505527076 NA intron (NM_023128, intron 1 of 8) intron (NM_023128, intron 1 of 8) 413 NM_001161747 18483 Mm.34650 NM_023128 ENSMUSG00000035863 Palm - paralemmin protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-6 chr19 28389612 28389909 + 0.950553505527076 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -288464 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_42_22_0.622680574152419_4.83490224313322_0.950553505527076 chr10 81643285 81643665 + 0.950553505527076 NA exon (NM_027480, exon 17 of 20) exon (NM_027480, exon 17 of 20) -5594 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 - predicted gene 10778 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-3 chr15 58823891 58824378 + 0.950553505527076 NA promoter-TSS (NM_175212) promoter-TSS (NM_175212) -707 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak2_41_22_0.588972739962367_4.8180483260382_0.950553505527076-5 chr8 105348925 105349243 + 0.950553505527076 NA 5' UTR (NM_001081332, exon 1 of 16) 5' UTR (NM_001081332, exon 1 of 16) 826 NM_001081332 277973 Mm.334766 NM_001081332 ENSMUSG00000014786 Slc9a5 Gm696 solute carrier family 9 (sodium/hydrogen exchanger), member 5 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-2 chr15 10672424 10673150 + 0.950553505527076 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 40753 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_42_22_0.622680574152419_4.83490224313322_0.950553505527076-3 chr18 82492398 82492759 + 0.950553505527076 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 17455 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-9 chr8 94953813 94954362 + 0.950553505527076 NA Intergenic Intergenic -23022 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak1_42_22_0.622680574152419_4.83490224313322_0.950553505527076 chr11 62814534 62815099 + 0.950553505527076 NA Intergenic Intergenic -5437 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding common_peak1_42_22_0.622680574152419_4.83490224313322_0.950553505527076-2 chr15 51877650 51878279 + 0.950553505527076 NA intron (NM_030132, intron 1 of 2) intron (NM_030132, intron 1 of 2) 523 NM_030132 78581 Mm.176347 NM_030132 ENSMUSG00000022313 Utp23 1700010I21Rik|AI662478|BB238373|D530033C11Rik UTP23 small subunit processome component protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-8 chr7 90306105 90306565 + 0.950553505527076 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 3980 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-10 chr7 84329767 84330184 + 0.950553505527076 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 80063 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_42_22_0.622680574152419_4.83490224313322_0.950553505527076-2 chr10 88826276 88826709 + 0.950553505527076 NA intron (NM_175158, intron 1 of 61) CpG 322 NM_175158 70683 Mm.29631 NM_175158 ENSMUSG00000004356 Utp20 3830408P06Rik|AA617408|Drim|mDRIM|mDRIN UTP20 small subunit processome component protein-coding unique_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-2 chr9 96888786 96889332 + 0.950553505527076 NA intron (NM_001289646, intron 1 of 6) CpG 415 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076 chr1 71918599 71919119 + 0.950553505527076 NA Intergenic Intergenic 30747 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076 chr6 13051185 13051961 + 0.950553505527076 NA Intergenic Intergenic -18186 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding unique_peak1_42_22_0.622680574152419_4.83490224313322_0.950553505527076-2 chr5 103425542 103426184 + 0.950553505527076 NA intron (NM_011204, intron 1 of 47) intron (NM_011204, intron 1 of 47) 671 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding common_peak2_41_22_0.588972739962367_4.8180483260382_0.950553505527076-4 chr3 139074634 139074970 + 0.950553505527076 NA intron (NM_001356388, intron 1 of 13) CpG 399 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak1_42_22_0.622680574152419_4.83490224313322_0.950553505527076-4 chr4 59331155 59331688 + 0.950553505527076 NA intron (NM_001163288, intron 13 of 16) intron (NM_001163288, intron 13 of 16) 71370 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-2 chr15 77881376 77881598 + 0.950553505527076 NA Intergenic Intergenic -39312 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_42_22_0.622680574152419_4.83490224313322_0.950553505527076-4 chr17 30005551 30005816 + 0.950553505527076 NA intron (NR_151443, intron 1 of 4) intron (NR_151443, intron 1 of 4) 644 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak2_26_35_-0.690323170968909_4.82476341595786_0.950553505527076-9 chr4 137697108 137697580 + 0.950553505527076 NA non-coding (NR_138594, exon 2 of 2) non-coding (NR_138594, exon 2 of 2) 9262 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA common_peak1_41_22_0.588972739962367_4.8180483260382_0.950553505527076-5 chr2 113367980 113368456 + 0.950553505527076 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 40482 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_41_22_0.588972739962367_4.8180483260382_0.950553505527076-2 chr15 77894196 77894601 + 0.950553505527076 NA Intergenic Intergenic 34596 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_26_35_-0.690323170968909_4.82476341595786_0.950553505527076 chr4 82506096 82506352 + 0.950553505527076 NA promoter-TSS (NM_001113210) promoter-TSS (NM_001113210) -445 NM_008687 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_42_22_0.622680574152419_4.83490224313322_0.950553505527076-3 chr16 57690261 57690653 + 0.950553505527076 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 64280 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_30_15_0.677504519126026_4.33875225956301_0.949797625454541-2 chr8 67729497 67729744 + 0.949797625454541 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 88675 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541 chr18 31788696 31788927 + 0.949797625454541 NA promoter-TSS (NM_001357480) promoter-TSS (NM_001357480) -314 NM_001357480 69241 Mm.279898 NM_027002 ENSMUSG00000024258 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-3 chr10 77005335 77005838 + 0.949797625454541 NA Intergenic Intergenic -6409 NR_045882 100038479 Mm.387034 NR_045882 ENSMUSG00000074919 Gm10787 - predicted gene 10787 ncRNA unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-8 chr15 81347435 81348042 + 0.949797625454541 NA intron (NM_011399, intron 1 of 8) intron (NM_011399, intron 1 of 8) 13027 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541 chr1 176827992 176828495 + 0.949797625454541 NA intron (NM_001357390, intron 3 of 18) intron (NM_001357390, intron 3 of 18) 7890 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-11 chr3 37370936 37371294 + 0.949797625454541 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 22462 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak2_31_15_0.722985064644551_4.36149253232228_0.949797625454541-2 chr14 76533687 76533964 + 0.949797625454541 NA intron (NM_001360048, intron 2 of 2) intron (NM_001360048, intron 2 of 2) -12970 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-7 chr4 62700911 62701414 + 0.949797625454541 NA exon (NM_001310706, exon 6 of 7) exon (NM_001310706, exon 6 of 7) 27188 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-8 chr4 84524126 84524546 + 0.949797625454541 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 150750 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_31_15_0.722985064644551_4.36149253232228_0.949797625454541-3 chr17 75112725 75112960 + 0.949797625454541 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -65939 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-6 chr14 36968346 36968624 + 0.949797625454541 NA intron (NM_027045, intron 1 of 10) CpG 279 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-2 chr10 39731703 39731929 + 0.949797625454541 NA promoter-TSS (NM_011264) promoter-TSS (NM_011264) 191 NR_038037 327744 Mm.295265 NM_183198 ENSMUSG00000087177 E130307A14Rik - RIKEN cDNA E130307A14 gene ncRNA common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-2 chr1 89264717 89265264 + 0.949797625454541 NA Intergenic Intergenic 141143 NR_040482 77331 Mm.374962 NR_040482 ENSMUSG00000099938 C030007H22Rik - RIKEN cDNA C030007H22 gene ncRNA unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-5 chr17 75327146 75327625 + 0.949797625454541 NA intron (NM_001331234, intron 20 of 28) intron (NM_001331234, intron 20 of 28) -108520 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak2_31_15_0.722985064644551_4.36149253232228_0.949797625454541 chr14 20806085 20806354 + 0.949797625454541 NA Intergenic Intergenic 11980 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541 chr1 86582273 86582801 + 0.949797625454541 NA promoter-TSS (NM_172974) promoter-TSS (NM_172974) 248 NM_001360816 18582 Mm.12925 NM_008801 ENSMUSG00000026239 Pde6d AI841218|PrBP/delta phosphodiesterase 6D, cGMP-specific, rod, delta protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-6 chr3 96558089 96558571 + 0.949797625454541 NA non-coding (NR_040409, exon 3 of 4) non-coding (NR_040409, exon 3 of 4) 373 NM_001009935 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-12 chr4 57681762 57682217 + 0.949797625454541 NA intron (NM_001304544, intron 3 of 8) intron (NM_001304544, intron 3 of 8) 113741 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding common_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-3 chr2 152671223 152671576 + 0.949797625454541 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 1938 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_31_15_0.722985064644551_4.36149253232228_0.949797625454541-5 chr19 4172112 4172344 + 0.949797625454541 NA exon (NM_134148, exon 4 of 10) exon (NM_134148, exon 4 of 10) 3251 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-4 chr17 56326075 56326401 + 0.949797625454541 NA intron (NM_172132, intron 1 of 22) CpG 188 NM_001357909 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b lysine (K)-specific demethylase 4B protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-9 chr16 17910752 17911286 + 0.949797625454541 NA intron (NM_001081633, intron 1 of 9) intron (NM_001081633, intron 1 of 9) 329 NM_022408 27886 Mm.256480 NM_022408 ENSMUSG00000003527 Dgcr14 AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el|Ess2 DiGeorge syndrome critical region gene 14 protein-coding common_peak2_30_15_0.677504519126026_4.33875225956301_0.949797625454541 chr19 4222625 4222994 + 0.949797625454541 NA 3' UTR (NM_001310038, exon 4 of 4) 3' UTR (NM_001310038, exon 4 of 4) 8420 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-3 chr1 153900147 153900659 + 0.949797625454541 NA TTS (NR_106194) TTS (NR_106194) 474 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-4 chr5 90609239 90609664 + 0.949797625454541 NA intron (NM_028478, intron 5 of 10) intron (NM_028478, intron 5 of 10) 31076 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding common_peak2_31_15_0.722985064644551_4.36149253232228_0.949797625454541-6 chr3 84582951 84583176 + 0.949797625454541 NA promoter-TSS (NM_001081093) promoter-TSS (NM_001081093) -438 NM_001081093 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-15 chr9 123106104 123106940 + 0.949797625454541 NA intron (NM_026917, intron 1 of 6) intron (NM_026917, intron 1 of 6) 6683 NM_026917 69035 Mm.28300 NM_026917 ENSMUSG00000025786 Zdhhc3 1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373 zinc finger, DHHC domain containing 3 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-4 chr10 127381096 127381609 + 0.949797625454541 NA intron (NM_001359244, intron 1 of 25) intron (NM_001359244, intron 1 of 25) 684 NM_001359244 71750 Mm.29342 NM_027900 ENSMUSG00000025404 R3hdm2 1300003K24Rik|AU041262|mKIAA1002 R3H domain containing 2 protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-9 chr7 116210079 116210489 + 0.949797625454541 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -11723 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-6 chr18 70472486 70472738 + 0.949797625454541 NA promoter-TSS (NM_001289649) promoter-TSS (NM_001289649) -16 NM_001289649 170461 Mm.83623 NM_029019 ENSMUSG00000079608 Stard6 1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424 StAR-related lipid transfer (START) domain containing 6 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-14 chr7 96135568 96136157 + 0.949797625454541 NA Intergenic Intergenic -35382 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-7 chr15 76625587 76625929 + 0.949797625454541 NA TTS (NM_183091) TTS (NM_183091) 326 NM_025842 66914 Mm.30028 NM_025842 ENSMUSG00000115987 Vps28 1110014J03Rik|CIIA|D730005C08Rik vacuolar protein sorting 28 protein-coding common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541 chr1 43160877 43161307 + 0.949797625454541 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 2869 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-7 chr5 130264939 130265195 + 0.949797625454541 NA intron (NR_153350, intron 3 of 15) intron (NR_153350, intron 3 of 15) 8030 NM_001015876 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-3 chr13 45401945 45402260 + 0.949797625454541 NA intron (NM_153789, intron 2 of 6) intron (NM_153789, intron 2 of 6) 12360 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding unique_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-2 chr10 21834197 21834501 + 0.949797625454541 NA Intergenic Intergenic -47835 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-10 chr16 35770499 35770943 + 0.949797625454541 NA intron (NR_152314, intron 1 of 8) intron (NR_152314, intron 1 of 8) 335 NM_175111 66667 Mm.45272 NM_175111 ENSMUSG00000022849 Hspbap1 3830421G21Rik Hspb associated protein 1 protein-coding common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-5 chr11 120352752 120353331 + 0.949797625454541 NA Intergenic Intergenic 4363 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-13 chr7 25251189 25251646 + 0.949797625454541 NA promoter-TSS (NM_010155) promoter-TSS (NM_010155) -659 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak2_31_15_0.722985064644551_4.36149253232228_0.949797625454541-4 chr17 87170894 87171159 + 0.949797625454541 NA Intergenic Intergenic 23916 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak1_31_15_0.722985064644551_4.36149253232228_0.949797625454541-2 chr2 18065558 18065905 + 0.949797625454541 NA intron (NM_010804, intron 2 of 22) intron (NM_010804, intron 2 of 22) 1146 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-4 chr10 108378400 108378679 + 0.949797625454541 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 46350 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_30_15_0.677504519126026_4.33875225956301_0.949797625454541-5 chr11 94959264 94959618 + 0.949797625454541 NA Intergenic Intergenic -8152 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding common_peak1_17_26_-0.856121273917519_4.32682686520471_0.949797625454538 chr1 9638676 9638974 + 0.949797625454538 NA Intergenic Intergenic -7733 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA common_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-5 chr6 106769251 106769547 + 0.949797625454538 NA intron (NM_001242358, intron 1 of 8) CpG 261 NM_001242360 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding common_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-4 chr5 74161133 74161576 + 0.949797625454538 NA Intergenic Intergenic -33972 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-7 chr7 109630095 109630481 + 0.949797625454538 NA Intergenic Intergenic -13141 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-3 chr3 153669098 153669404 + 0.949797625454538 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 55882 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak1_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-2 chr12 99563271 99563545 + 0.949797625454538 NA promoter-TSS (NR_136760) promoter-TSS (NR_136760) -433 NR_136760 102639404 Mm.396324 NR_136760 ENSMUSG00000097917 Gm26839 - predicted gene, 26839 ncRNA unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538 chr10 30200187 30200534 + 0.949797625454538 NA intron (NM_001109747, intron 1 of 2) CpG 180 NM_001109747 66311 Mm.251779 NM_001109747 ENSMUSG00000075266 Cenpw 2610036L11Rik|Cug2 centromere protein W protein-coding common_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-2 chr2 131160272 131160552 + 0.949797625454538 NA promoter-TSS (NM_026091) promoter-TSS (NM_026091) -331 NM_026091 67326 Mm.27711 NM_026091 ENSMUSG00000027327 1700037H04Rik - RIKEN cDNA 1700037H04 gene protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-3 chr11 19920589 19921068 + 0.949797625454538 NA Intergenic ID_B1|SINE|B4 -3614 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-4 chr15 97773420 97773624 + 0.949797625454538 NA Intergenic Intergenic -5856 NM_001357630 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-5 chr16 49951360 49951716 + 0.949797625454538 NA Intergenic Intergenic -4292 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA common_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538 chr2 104122748 104123320 + 0.949797625454538 NA exon (NM_026634, exon 1 of 2) exon (NM_026634, exon 1 of 2) 265 NM_026634 68243 Mm.158191 NM_026634 ENSMUSG00000032671 A930018P22Rik - RIKEN cDNA A930018P22 gene protein-coding common_peak1_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-3 chr15 89181214 89181445 + 0.949797625454538 NA promoter-TSS (NM_138749) promoter-TSS (NM_138749) -541 NM_138749 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-4 chr14 20190009 20190521 + 0.949797625454538 NA Intergenic B4A|SINE|B4 -8483 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-8 chr9 107624880 107625384 + 0.949797625454538 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 10210 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-2 chr10 71086534 71087165 + 0.949797625454538 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 72841 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-6 chr6 48839654 48840175 + 0.949797625454538 NA intron (NM_001164208, intron 1 of 6) intron (NM_001164208, intron 1 of 6) 1074 NM_023056 65963 Mm.28385 NM_023056 ENSMUSG00000029810 Tmem176b 1810009M01Rik|Clast1|Lr8 transmembrane protein 176B protein-coding common_peak1_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-5 chr17 25222708 25222988 + 0.949797625454538 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 266 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak2_17_26_-0.856121273917519_4.32682686520471_0.949797625454538-6 chr8 23237400 23237669 + 0.949797625454538 NA 5' UTR (NM_024240, exon 1 of 8) 5' UTR (NM_024240, exon 1 of 8) 134 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-27 chr9 83589477 83589785 + 0.949240599462708 NA intron (NM_172507, intron 2 of 3) intron (NM_172507, intron 2 of 3) 41293 NM_172507 212531 Mm.491246 NM_172507 ENSMUSG00000032261 Sh3bgrl2 A930014C21Rik|AA408038|B930089I21 SH3 domain binding glutamic acid-rich protein like 2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-3 chr11 35981534 35981874 + 0.949240599462708 NA Intergenic Intergenic -1615 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-6 chr5 144898901 144899143 + 0.949240599462708 NA intron (NM_001038627, intron 5 of 17) intron (NM_001038627, intron 5 of 17) -2206 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-7 chr6 113333357 113333667 + 0.949240599462708 NA TTS (NM_133926) TTS (NM_133926) 6536 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708 chr1 193298498 193298862 + 0.949240599462708 NA Intergenic Intergenic -3314 NM_008484 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-15 chr19 5745489 5746027 + 0.949240599462708 NA exon (NM_008520, exon 3 of 28) exon (NM_008520, exon 3 of 28) 4854 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-11 chr8 22680833 22681074 + 0.949240599462708 NA intron (NM_001159774, intron 7 of 21) intron (NM_001159774, intron 7 of 21) 25630 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_13_22_-0.984807882691844_4.03115801471109_0.949240599462708 chr10 43634127 43634365 + 0.949240599462708 NA Intergenic Intergenic 40819 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708 chr10 23558521 23558916 + 0.949240599462708 NA Intergenic Intergenic -208775 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-8 chr3 63962437 63962754 + 0.949240599462708 NA intron (NM_001272035, intron 1 of 6) intron (NM_001272035, intron 1 of 6) 2138 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-24 chr7 114180819 114181182 + 0.949240599462708 NA Intergenic Intergenic -63219 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-11 chr15 56571582 56572036 + 0.949240599462708 NA Intergenic Intergenic -118135 NR_002874 594843 Mm.484850 NR_002874 ENSMUSG00000086541 Has2os EG594843|Has2as|Hasnt hyaluronan synthase 2, opposite strand ncRNA unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-7 chr5 149636469 149636759 + 0.949240599462708 NA promoter-TSS (NM_013559) promoter-TSS (NM_013559) -278 NM_001347534 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-6 chr19 28556600 28557080 + 0.949240599462708 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -121384 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708 chr10 82127996 82128229 + 0.949240599462708 NA promoter-TSS (NM_001163064) promoter-TSS (NM_001163064) 99 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-6 chr2 153428808 153429111 + 0.949240599462708 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 15520 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-2 chr1 133979015 133979253 + 0.949240599462708 NA Intergenic Intergenic -57733 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-4 chr14 20393073 20393469 + 0.949240599462708 NA TTS (NM_001163638) TTS (NM_001163638) 219 NR_155747 66242 Mm.23747 NM_025440 ENSMUSG00000049960 Mrps16 1500011E11Rik|Mprs16|S16mt mitochondrial ribosomal protein S16 protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-6 chr5 115560236 115560550 + 0.949240599462708 NA intron (NM_007475, intron 2 of 6) intron (NM_007475, intron 2 of 6) 926 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-4 chr15 97989804 97990059 + 0.949240599462708 NA intron (NM_001113515, intron 17 of 52) intron (NM_001113515, intron 17 of 52) 14793 NM_031163 12824 Mm.2423 NM_031163 ENSMUSG00000022483 Col2a1 Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|Rgsc856 collagen, type II, alpha 1 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-16 chr19 56998738 56998988 + 0.949240599462708 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 9712 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-25 chr8 120755829 120756343 + 0.949240599462708 NA 3' UTR (NM_008320, exon 9 of 9) 3' UTR (NM_008320, exon 9 of 9) 17447 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-7 chr2 57115623 57116184 + 0.949240599462708 NA promoter-TSS (NM_013613) promoter-TSS (NM_013613) -865 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708 chr1 89067960 89068348 + 0.949240599462708 NA Intergenic Intergenic -2261 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-3 chr13 42306853 42307126 + 0.949240599462708 NA 3' UTR (NM_010104, exon 5 of 5) 3' UTR (NM_010104, exon 5 of 5) 5513 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-12 chr15 69065086 69065500 + 0.949240599462708 NA intron (NM_010158, intron 7 of 8) intron (NM_010158, intron 7 of 8) 136873 NM_010158 13992 Mm.17964 NM_010158 ENSMUSG00000022332 Khdrbs3 Etle|SLM-2|Salp|Slm2|T-STAR KH domain containing, RNA binding, signal transduction associated 3 protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-5 chr2 152789140 152789513 + 0.949240599462708 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 35153 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit 4I2 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708 chr1 125687512 125687923 + 0.949240599462708 NA intron (NM_027677, intron 1 of 1) intron (NM_027677, intron 1 of 1) 10721 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-3 chr14 7849611 7849939 + 0.949240599462708 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 31818 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-5 chr11 88234833 88235237 + 0.949240599462708 NA Intergenic Intergenic 30647 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-2 chr10 95778567 95778922 + 0.949240599462708 NA Intergenic Intergenic -161919 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708-5 chr4 141239755 141240120 + 0.949240599462708 NA Intergenic Intergenic -2947 NM_172520 213649 Mm.134460 NM_172520 ENSMUSG00000028919 Arhgef19 6030432F23|6430573B13Rik|WGEF Rho guanine nucleotide exchange factor (GEF) 19 protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-8 chr9 69431323 69431547 + 0.949240599462708 NA intron (NM_145618, intron 15 of 15) intron (NM_145618, intron 15 of 15) -22248 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-13 chr15 81420560 81421108 + 0.949240599462708 NA intron (NM_177310, intron 2 of 8) intron (NM_177310, intron 2 of 8) -12561 NM_021317 57755 Mm.440590 NM_021317 ENSMUSG00000047108 Dnajb7 4933424H20Rik|Dj5|mDj5 DnaJ heat shock protein family (Hsp40) member B7 protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708 chr1 125678457 125678751 + 0.949240599462708 NA intron (NM_027677, intron 1 of 1) intron (NM_027677, intron 1 of 1) 1608 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-6 chr12 81749333 81749850 + 0.949240599462708 NA intron (NM_001174107, intron 2 of 10) intron (NM_001174107, intron 2 of 10) 31579 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708-7 chrX 71364900 71365191 + 0.949240599462708 NA exon (NM_016985, exon 1 of 15) exon (NM_016985, exon 1 of 15) 285 NM_001313706 53332 Mm.219672 NM_016985 ENSMUSG00000015214 Mtmr1 AW049210 myotubularin related protein 1 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-3 chr12 109799170 109799579 + 0.949240599462708 NA Intergenic Intergenic 51496 NR_037233 100499517 NR_037233 ENSMUSG00000093351 Mir3072 mir-3072|mmu-mir-3072 microRNA 3072 ncRNA common_peak1_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-3 chr2 118108748 118109030 + 0.949240599462708 NA intron (NR_126479, intron 1 of 9) intron (NR_126479, intron 1 of 9) 2313 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-2 chr11 119040323 119040796 + 0.949240599462708 NA intron (NM_013926, intron 1 of 4) intron (NM_013926, intron 1 of 4) 354 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-6 chr2 84548246 84548549 + 0.949240599462708 NA Intergenic Intergenic -41524 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-14 chr17 49473470 49474058 + 0.949240599462708 NA intron (NM_001008231, intron 16 of 25) intron (NM_001008231, intron 16 of 25) 45400 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-14 chrX 106187656 106188168 + 0.949240599462708 NA intron (NM_008828, intron 1 of 10) intron (NM_008828, intron 1 of 10) 812 NM_008828 18655 Mm.316355 NM_008828 ENSMUSG00000062070 Pgk1 Pgk-1 phosphoglycerate kinase 1 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-17 chr2 122368493 122369031 + 0.949240599462708 NA 5' UTR (NM_001013829, exon 1 of 6) 5' UTR (NM_001013829, exon 1 of 6) 156 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708-3 chr14 121248830 121249097 + 0.949240599462708 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 257 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-4 chr17 21489105 21489603 + 0.949240599462708 NA intron (NM_013843, intron 1 of 4) intron (NM_013843, intron 1 of 4) 366 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708 chr1 105185095 105185506 + 0.949240599462708 NA Intergenic Intergenic -170707 NR_151539 100504568 Mm.321153 NR_151538 ENSMUSG00000097482 Gm17634 - predicted gene, 17634 ncRNA common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-5 chr13 113551628 113551978 + 0.949240599462708 NA Intergenic Intergenic -48959 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-9 chr5 146833865 146834289 + 0.949240599462708 NA intron (NM_019647, intron 1 of 5) intron (NM_019647, intron 1 of 5) 1187 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-3 chr11 119989569 119990144 + 0.949240599462708 NA intron (NM_001037754, intron 6 of 13) intron (NM_001037754, intron 6 of 13) -24911 NR_037225 100526518 NR_037225 ENSMUSG00000105524 Mir3065 mir-3065|mmu-mir-3065 microRNA 3065 ncRNA unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-10 chr15 38939784 38940195 + 0.949240599462708 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 6080 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-22 chr6 17224408 17224871 + 0.949240599462708 NA Intergenic Intergenic 26532 NR_102304 319682 Mm.136046 NR_102304 ENSMUSG00000085171 D830026I12Rik - RIKEN cDNA D830026I12 gene ncRNA unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-5 chr15 101381473 101381790 + 0.949240599462708 NA Intergenic Intergenic -11506 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-3 chr11 120347264 120347488 + 0.949240599462708 NA promoter-TSS (NR_105900) promoter-TSS (NR_105900) 37 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-5 chr17 24735895 24736165 + 0.949240599462708 NA promoter-TSS (NM_001346668) promoter-TSS (NM_001346668) -563 NM_013759 27361 Mm.28212 NM_013759 ENSMUSG00000075705 Msrb1 D17Wsu82e|SELX|SelR|Sepr|Sepx1 methionine sulfoxide reductase B1 protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708-4 chr3 79906599 79906920 + 0.949240599462708 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 20829 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-7 chr3 121639797 121640093 + 0.949240599462708 NA intron (NR_036458, intron 1 of 2) intron (NR_036458, intron 1 of 2) 3540 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-2 chr11 100521121 100521612 + 0.949240599462708 NA intron (NM_134037, intron 3 of 27) intron (NM_134037, intron 3 of 27) 6634 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-2 chr1 151064386 151064696 + 0.949240599462708 NA Intergenic Intergenic -71106 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-9 chr6 91730945 91731304 + 0.949240599462708 NA intron (NM_009320, intron 5 of 14) intron (NM_009320, intron 5 of 14) 47057 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-8 chr13 97299908 97300263 + 0.949240599462708 NA Intergenic Intergenic 58980 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-5 chr5 92353490 92353799 + 0.949240599462708 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -4755 NM_021274 15945 Mm.877 NM_021274 ENSMUSG00000034855 Cxcl10 C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1 chemokine (C-X-C motif) ligand 10 protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708-2 chr14 52279685 52279889 + 0.949240599462708 NA promoter-TSS (NM_172601) promoter-TSS (NM_172601) -392 NM_172601 76338 Mm.32870 NM_172601 ENSMUSG00000022159 Rab2b 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik RAB2B, member RAS oncogene family protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-12 chr9 56868613 56869052 + 0.949240599462708 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 3728 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-18 chr2 131507168 131507816 + 0.949240599462708 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 15630 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-7 chr12 112941629 112942096 + 0.949240599462708 NA intron (NM_001316724, intron 1 of 4) CpG 280 NM_025399 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_26_12_0.77916211233231_4.09002077430725_0.949240599462708-6 chr9 57147728 57147948 + 0.949240599462708 NA intron (NR_151685, intron 1 of 8) intron (NR_151685, intron 1 of 8) 467 NM_028347 72774 Mm.35749 NM_028347 ENSMUSG00000032298 Neil1 2810450N13Rik|NEH1|Nei1 nei endonuclease VIII-like 1 (E. coli) protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-23 chr7 100465474 100465958 + 0.949240599462708 NA intron (NM_001017985, intron 32 of 32) intron (NM_001017985, intron 32 of 32) -7275 NM_009464 22229 Mm.6254 NM_009464 ENSMUSG00000032942 Ucp3 AI645527|Slc25a9|UCP-3 uncoupling protein 3 (mitochondrial, proton carrier) protein-coding common_peak1_14_22_-0.88597443128464_4.08057474041469_0.949240599462708 chr13 31625818 31626039 + 0.949240599462708 NA 5' UTR (NM_010225, exon 1 of 2) 5' UTR (NM_010225, exon 1 of 2) 112 NM_010225 14238 Mm.125548 NM_010225 ENSMUSG00000038402 Foxf2 FREAC2|Fkh20|LUN forkhead box F2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-19 chr4 9066322 9066880 + 0.949240599462708 NA Intergenic Intergenic -202692 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-10 chr8 107456567 107456975 + 0.949240599462708 NA intron (NM_025830, intron 2 of 23) intron (NM_025830, intron 2 of 23) 20373 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-20 chr4 136206578 136206913 + 0.949240599462708 NA intron (NM_001008232, intron 1 of 24) intron (NM_001008232, intron 1 of 24) 380 NM_001355698 230837 Mm.77788 NM_001008232 ENSMUSG00000036995 Asap3 9430088F20Rik|Ddefl1|Gm140|UPLC1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 protein-coding common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-4 chr13 42351337 42351580 + 0.949240599462708 NA Intergenic Intergenic 49982 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-8 chr7 145043600 145043992 + 0.949240599462708 NA Intergenic Intergenic -103871 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak1_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-2 chr14 19823539 19823769 + 0.949240599462708 NA intron (NM_026528, intron 1 of 7) CpG 169 NM_026528 68045 Mm.21932 NM_026528 ENSMUSG00000021807 Rtraf 2700060E02Rik RNA transcription, translation and transport factor protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-10 chr7 112714660 112715031 + 0.949240599462708 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 35525 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-26 chr9 20728097 20728764 + 0.949240599462708 NA promoter-TSS (NM_173777) promoter-TSS (NM_173777) -201 NM_173777 244723 Mm.293552 NM_173777 ENSMUSG00000032172 Olfm2 A030009A06Rik olfactomedin 2 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-10 chr7 66292470 66292884 + 0.949240599462708 NA intron (NM_146191, intron 15 of 33) intron (NM_146191, intron 15 of 33) 89047 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-8 chr2 117941950 117942410 + 0.949240599462708 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 120252 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-13 chrX 8132635 8133244 + 0.949240599462708 NA promoter-TSS (NM_026137) promoter-TSS (NM_026137) -81 NM_026137 73447 Mm.284162 NM_026137 ENSMUSG00000031166 Wdr13 1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21 WD repeat domain 13 protein-coding common_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-4 chr2 34869282 34869566 + 0.949240599462708 NA intron (NM_080554, intron 1 of 9) intron (NM_080554, intron 1 of 9) 1538 NM_001355544 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-2 chr10 19597681 19598080 + 0.949240599462708 NA intron (NM_010511, intron 2 of 6) B2_Mm1a|SINE|B2 5931 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-21 chr5 24577822 24578133 + 0.949240599462708 NA promoter-TSS (NM_001190443) promoter-TSS (NM_001190443) -510 NM_001190443 27407 Mm.21629 NM_013853 ENSMUSG00000028953 Abcf2 0710005O05Rik|Drr3|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-4 chr11 59412589 59412940 + 0.949240599462708 NA intron (NM_001356454, intron 3 of 3) intron (NM_001356454, intron 3 of 3) -37111 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-10 chr6 83108633 83108925 + 0.949240599462708 NA promoter-TSS (NM_026744) promoter-TSS (NM_026744) -329 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding unique_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-9 chr8 87959185 87959526 + 0.949240599462708 NA 5' UTR (NM_033327, exon 1 of 8) 5' UTR (NM_033327, exon 1 of 8) 240 NM_033327 94187 Mm.23452 NM_033327 ENSMUSG00000045333 Zfp423 Ebfaz|Roaz|Zfp104|Znf423|ataxia1|mKIAA0760|nur12 zinc finger protein 423 protein-coding common_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-7 chr2 172468807 172469214 + 0.949240599462708 NA 3' UTR (NM_025542, exon 9 of 9) 3' UTR (NM_025542, exon 9 of 9) -3544 NM_029608 76426 Mm.46148 NM_029608 ENSMUSG00000027505 Fam209 1700029J11Rik family with sequence similarity 209 protein-coding unique_peak2_14_22_-0.88597443128464_4.08057474041469_0.949240599462708-9 chr6 127109171 127109431 + 0.949240599462708 NA intron (NM_177003, intron 1 of 5) CpG 251 NM_177003 319801 Mm.101836 NM_177003 ENSMUSG00000038028 Tigar 9630033F20Rik|AA793651|AI595337|C79710|C85509 Trp53 induced glycolysis repulatory phosphatase protein-coding unique_peak1_26_12_0.77916211233231_4.09002077430725_0.949240599462708-9 chr14 46634185 46634484 + 0.949240599462708 NA intron (NR_046460, intron 1 of 4) intron (NR_046460, intron 1 of 4) 3089 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA common_peak2_13_22_-0.984807882691844_4.03115801471109_0.949240599462708-8 chr4 99493614 99494130 + 0.949240599462708 NA Intergenic Intergenic -162427 NM_010425 15221 Mm.4758 NM_010425 ENSMUSG00000067261 Foxd3 CWH3|Genesis|Hfh2 forkhead box D3 protein-coding common_peak2_230_223_-0.252739847232204_7.6809849984415_0.949029543807484 chr6 113377209 113379029 + 0.949029543807484 NA promoter-TSS (NM_133932) promoter-TSS (NM_133932) 6 NM_001170486 68089 Mm.289306 NM_026552 ENSMUSG00000079426 Arpc4 20kDa|5330419I20Rik|AI327076|p20-Arc actin related protein 2/3 complex, subunit 4 protein-coding common_peak2_166_109_0.308512658501884_6.9356160427756_0.948468077906396 chr2 14073455 14074628 + 0.948468077906396 NA promoter-TSS (NR_038162) promoter-TSS (NR_038162) -59 NM_001356337 20844 Mm.273174 NM_011484 ENSMUSG00000026718 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-3 chr16 31188826 31189042 + 0.947717972411649 NA intron (NM_030138, intron 1 of 22) RSINE1|SINE|B4 12304 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding unique_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-4 chr2 32907252 32907455 + 0.947717972411649 NA intron (NM_146119, intron 2 of 13) B1F1|SINE|Alu 31219 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-6 chr4 133687314 133687513 + 0.947717972411649 NA intron (NM_001080819, intron 13 of 19) intron (NM_001080819, intron 13 of 19) -14247 NM_001356466 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649 chr1 133692154 133692377 + 0.947717972411649 NA Intergenic Intergenic -2157 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-4 chr2 75611185 75611425 + 0.947717972411649 NA Intergenic Intergenic -47954 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649 chr16 85141111 85141309 + 0.947717972411649 NA intron (NM_001198825, intron 1 of 15) GA-rich|Low_complexity|Low_complexity 32497 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-2 chr3 31024236 31024436 + 0.947717972411649 NA intron (NM_008857, intron 2 of 17) RLTR30B_MM|LTR|ERV1 -14630 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-7 chr9 63839867 63840072 + 0.947717972411649 NA Intergenic MIRb|SINE|MIR -81975 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-6 chr3 89396180 89396368 + 0.947717972411649 NA intron (NR_040404, intron 1 of 1) CpG 1984 NR_040404 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 - predicted gene 15417 ncRNA unique_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-6 chr5 129896033 129896265 + 0.947717972411649 NA intron (NM_183088, intron 1 of 3) (TTTTG)n|Simple_repeat|Simple_repeat 426 NM_183088 71970 Mm.422716 NM_183088 ENSMUSG00000034173 Zbed5 2410018M08Rik|Scand3 zinc finger, BED type containing 5 protein-coding unique_peak1_6_6_-0.26154586911919_2.67658198749801_0.947717972411649 chr11 12029006 12029205 + 0.947717972411649 NA intron (NM_010345, intron 1 of 16) intron (NM_010345, intron 1 of 16) -1134 NM_001177629 14783 Mm.273117 NM_010345 ENSMUSG00000020176 Grb10 5730571D09Rik|AI325020|Meg1|mKIAA0207 growth factor receptor bound protein 10 protein-coding unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-2 chr13 15778134 15778338 + 0.947717972411649 NA Intergenic Intergenic 24394 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649 chr6 114724481 114724685 + 0.947717972411649 NA intron (NM_001253718, intron 17 of 19) ID_B1|SINE|B4 81486 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding unique_peak1_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-5 chr8 105804741 105804932 + 0.947717972411649 NA intron (NM_145824, intron 3 of 13) intron (NM_145824, intron 3 of 13) 22514 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-7 chr3 123055136 123055342 + 0.947717972411649 NA Intergenic ID_B1|SINE|B4 -20252 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-2 chr19 18754659 18754867 + 0.947717972411649 NA intron (NM_153417, intron 1 of 38) ID4|SINE|ID 4780 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-4 chr17 45787889 45788134 + 0.947717972411649 NA Intergenic B1_Mur1|SINE|Alu 53505 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-2 chr7 112466147 112466346 + 0.947717972411649 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 38540 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding unique_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649 chr1 186589865 186590079 + 0.947717972411649 NA Intergenic Intergenic -31291 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-5 chr3 37476969 37477201 + 0.947717972411649 NA intron (NM_021343, intron 14 of 15) intron (NM_021343, intron 14 of 15) 57135 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding unique_peak1_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-3 chr12 8873619 8873810 + 0.947717972411649 NA Intergenic Intergenic -47593 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649 chr17 56269088 56269306 + 0.947717972411649 NA TTS (NM_174989) TTS (NM_174989) 7570 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-3 chr11 120317032 120317234 + 0.947717972411649 NA Intergenic Intergenic 30280 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA unique_peak1_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-2 chr11 16761653 16761863 + 0.947717972411649 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 9555 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-2 chr13 14615945 14616135 + 0.947717972411649 NA exon (NM_008944, exon 2 of 8) exon (NM_008944, exon 2 of 8) 2798 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding unique_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-2 chr16 45943405 45943657 + 0.947717972411649 NA Intergenic Intergenic -2075 NR_152226 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-2 chr1 162128561 162128760 + 0.947717972411649 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -88963 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-3 chr19 37346627 37346876 + 0.947717972411649 NA Intergenic MER20|DNA|hAT-Charlie -16138 NM_031156 15925 Mm.28366 NM_031156 ENSMUSG00000056999 Ide 1300012G03Rik|4833415K22Rik|AA675336|AI507533 insulin degrading enzyme protein-coding unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649 chr11 12422236 12422482 + 0.947717972411649 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) -10219 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak1_5_6_-0.482369316465865_2.56617026382467_0.947717972411649 chr13 92070455 92070651 + 0.947717972411649 NA Intergenic Intergenic -82511 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding common_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649 chr9 35341612 35341883 + 0.947717972411649 NA Intergenic MIRc|SINE|MIR 60642 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-8 chr6 13382708 13382920 + 0.947717972411649 NA Intergenic T-rich|Low_complexity|Low_complexity -30523 NR_038149 69413 Mm.177847 NR_038149 ENSMUSG00000101894 1700016P04Rik - RIKEN cDNA 1700016P04 gene ncRNA unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-6 chr5 135743162 135743410 + 0.947717972411649 NA intron (NM_172541, intron 1 of 11) intron (NM_172541, intron 1 of 11) 886 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-5 chr17 45878650 45878918 + 0.947717972411649 NA Intergenic Intergenic 2668 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-5 chr3 88147117 88147320 + 0.947717972411649 NA intron (NM_001310593, intron 1 of 10) intron (NM_001310593, intron 1 of 10) 4846 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding unique_peak1_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-4 chr4 150902928 150903169 + 0.947717972411649 NA intron (NM_020569, intron 5 of 6) intron (NM_020569, intron 5 of 6) 6873 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding unique_peak2_5_6_-0.482369316465865_2.56617026382467_0.947717972411649-4 chr2 152679325 152679552 + 0.947717972411649 NA intron (NM_010376, intron 2 of 11) B3|SINE|B2 -7710 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-3 chr14 31020100 31020302 + 0.947717972411649 NA intron (NM_001359857, intron 1 of 30) PB1D10|SINE|Alu 496 NM_001359856 66923 Mm.27913 NM_025847 ENSMUSG00000042323 Pbrm1 2610016F04Rik|AI507524|BAF180|Pb1 polybromo 1 protein-coding unique_peak2_6_6_-0.26154586911919_2.67658198749801_0.947717972411649-5 chr2 158138035 158138245 + 0.947717972411649 NA intron (NM_009373, intron 3 of 12) intron (NM_009373, intron 3 of 12) 8252 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding unique_peak1_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649 chr12 21427871 21428084 + 0.947717972411649 NA Intergenic Intergenic -10541 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding unique_peak2_6_5_-0.0391534477827422_2.56538577682978_0.947717972411649-7 chr4 149171177 149171408 + 0.947717972411649 NA Intergenic B2_Mm1a|SINE|B2 -4587 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak2_154_156_-0.311569290158211_7.13883610381252_0.947467419899041 chr1 135819973 135822288 + 0.947467419899041 NA intron (NM_133664, intron 1 of 9) intron (NM_133664, intron 1 of 9) 2532 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding common_peak1_155_156_-0.302356931355547_7.14344228321385_0.947467419899041 chr13 45963261 45964988 + 0.947467419899041 NA intron (NM_001199304, intron 1 of 6) CpG 867 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-34 chr8 93888834 93889056 + 0.947446088118041 NA intron (NM_001113384, intron 2 of 7) intron (NM_001113384, intron 2 of 7) -75390 NR_026888 75809 Mm.443272 NM_029449 4930488L21Rik 4930452J22Rik RIKEN cDNA 4930488L21 gene ncRNA unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-29 chr5 98035414 98035638 + 0.947446088118041 NA Intergenic LTR16A|LTR|ERVL -4564 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-7 chr11 70026319 70026531 + 0.947446088118041 NA intron (NM_007864, intron 1 of 19) intron (NM_007864, intron 1 of 19) 7820 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-28 chr9 13425797 13426203 + 0.947446088118041 NA Intergenic Intergenic -5361 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_17_7_0.898766228245949_3.44938311412297_0.947446088118041-2 chr5 92844239 92844438 + 0.947446088118041 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 34956 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-12 chr13 28759821 28760171 + 0.947446088118041 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -49123 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-3 chr17 35814979 35815183 + 0.947446088118041 NA Intergenic Intergenic -6632 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-24 chr2 132816198 132816475 + 0.947446088118041 NA promoter-TSS (NM_001356443) promoter-TSS (NM_001356443) 195 NM_001291054 66634 Mm.157070 NM_025676 ENSMUSG00000027353 Mcm8 5730432L01Rik minichromosome maintenance 8 homologous recombination repair factor protein-coding common_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041 chr11 82035715 82035953 + 0.947446088118041 NA intron (NM_011333, intron 1 of 2) intron (NM_011333, intron 1 of 2) 257 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-13 chr13 59891976 59892374 + 0.947446088118041 NA Intergenic Intergenic -69028 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-27 chr8 11296843 11297292 + 0.947446088118041 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -15738 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-19 chr15 66998926 66999200 + 0.947446088118041 NA Intergenic Intergenic -29422 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-5 chr11 72135382 72135656 + 0.947446088118041 NA intron (NM_001024927, intron 1 of 19) CpG 370 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-5 chr16 57551864 57552158 + 0.947446088118041 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 2769 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-17 chr17 12783322 12783689 + 0.947446088118041 NA intron (NR_027784, intron 2 of 2) intron (NR_027784, intron 2 of 2) -13799 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-4 chr10 59310225 59310451 + 0.947446088118041 NA Intergenic Intergenic -12958 NM_001316371 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-8 chr13 56606723 56606952 + 0.947446088118041 NA Intergenic Intergenic -2749 NM_009369 21810 Mm.14455 NM_009369 ENSMUSG00000035493 Tgfbi 68kDa|AI181842|AI747162|Beta-ig|big-h3 transforming growth factor, beta induced protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-16 chr2 27467684 27468074 + 0.947446088118041 NA intron (NM_001113573, intron 1 of 11) intron (NM_001113573, intron 1 of 11) 7519 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-14 chr13 107940474 107940852 + 0.947446088118041 NA Intergenic Intergenic -50599 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-14 chr18 56977484 56977793 + 0.947446088118041 NA Intergenic Intergenic -2259 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-9 chr13 105294228 105294448 + 0.947446088118041 NA 5' UTR (NM_001360890, exon 1 of 8) 5' UTR (NM_001360890, exon 1 of 8) 147 NM_001360890 71816 Mm.317015 NM_027934 ENSMUSG00000021720 Rnf180 3110001E11Rik|Rines ring finger protein 180 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-33 chr8 84554411 84554618 + 0.947446088118041 NA intron (NM_001252060, intron 17 of 47) intron (NM_001252060, intron 17 of 47) 108338 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-15 chr15 27800871 27801180 + 0.947446088118041 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -119483 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-6 chr7 41499012 41499200 + 0.947446088118041 NA intron (NM_001033530, intron 1 of 3) intron (NM_001033530, intron 1 of 3) 784 NM_001033530 101835 Mm.370336 NM_001033530 ENSMUSG00000074166 AW146154 AI451288 expressed sequence AW146154 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-23 chr2 118523391 118523706 + 0.947446088118041 NA Intergenic Intergenic 21039 NR_138603 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-30 chr9 53975445 53975709 + 0.947446088118041 NA promoter-TSS (NM_177769) promoter-TSS (NM_177769) -276 NM_177769 270162 Mm.259791 NM_177769 ENSMUSG00000041986 Elmod1 4831417L10|AI428506|AI834991 ELMO/CED-12 domain containing 1 protein-coding common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041 chr1 160043940 160044333 + 0.947446088118041 NA promoter-TSS (NR_028111) promoter-TSS (NR_028111) -244 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-37 chr5 130842826 130843081 + 0.947446088118041 NA Intergenic Intergenic 394161 NM_021371 140904 Mm.40875 NM_021371 ENSMUSG00000060371 Caln1 9630012C17Rik|Cabp8|MNCb-0849 calneuron 1 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-8 chr2 137723463 137723839 + 0.947446088118041 NA Intergenic Intergenic -532933 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-47 chr8 71283775 71284146 + 0.947446088118041 NA intron (NM_001142322, intron 1 of 39) intron (NM_001142322, intron 1 of 39) 11246 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-2 chr11 99105936 99106227 + 0.947446088118041 NA Intergenic Intergenic -16775 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-30 chr6 54040165 54040379 + 0.947446088118041 NA intron (NM_001163640, intron 1 of 12) CpG 340 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-18 chr15 62467869 62468146 + 0.947446088118041 NA Intergenic Intergenic -248556 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-5 chr7 19337841 19338070 + 0.947446088118041 NA Intergenic Intergenic -7116 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-22 chr2 117956553 117956837 + 0.947446088118041 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 134767 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-28 chr2 102883118 102883330 + 0.947446088118041 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 18441 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-5 chr10 76649261 76649543 + 0.947446088118041 NA Intergenic Intergenic -25772 NM_001347207 12834 Mm.1949 NM_146007 ENSMUSG00000020241 Col6a2 Col6a-2 collagen, type VI, alpha 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-9 chr12 69411027 69411426 + 0.947446088118041 NA Intergenic Intergenic 39076 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-14 chr14 46998782 46999047 + 0.947446088118041 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -2426 NM_001163433 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-35 chr5 114412813 114413008 + 0.947446088118041 NA intron (NM_001331219, intron 23 of 26) intron (NM_001331219, intron 23 of 26) 8442 NR_105994 102465621 NR_105994 ENSMUSG00000098731 Mir7027 Gm27831|mmu-mir-7027 microRNA 7027 ncRNA unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-3 chr1 194995455 194995792 + 0.947446088118041 NA Intergenic Intergenic -18664 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-19 chr18 9389646 9389886 + 0.947446088118041 NA intron (NM_026484, intron 1 of 9) intron (NM_026484, intron 1 of 9) 60388 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-9 chr5 32785168 32785370 + 0.947446088118041 NA intron (NM_177298, intron 1 of 7) intron (NM_177298, intron 1 of 7) 357 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-15 chr15 10690603 10690862 + 0.947446088118041 NA intron (NM_001166408, intron 1 of 17) L1MA8|LINE|L1 22808 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_17_7_0.898766228245949_3.44938311412297_0.947446088118041 chr3 104865509 104865728 + 0.947446088118041 NA intron (NR_045578, intron 1 of 13) intron (NR_045578, intron 1 of 13) 1112 NM_001253702 229681 Mm.206379 NM_153091 ENSMUSG00000045576 St7l St7r suppression of tumorigenicity 7-like protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-20 chr15 83474336 83474581 + 0.947446088118041 NA Intergenic Intergenic -9852 NM_001358643 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-20 chr4 58148444 58148863 + 0.947446088118041 NA intron (NM_022814, intron 3 of 47) B3|SINE|B2 57943 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-32 chr7 100372468 100372800 + 0.947446088118041 NA promoter-TSS (NM_028292) promoter-TSS (NM_028292) 401 NM_001017985 277939 Mm.276374 NM_001017985 ENSMUSG00000047248 C2cd3 AU020772 C2 calcium-dependent domain containing 3 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-3 chr12 112591127 112591398 + 0.947446088118041 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 2478 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-31 chr6 146939573 146939985 + 0.947446088118041 NA intron (NM_001355729, intron 3 of 27) B1_Mur4|SINE|Alu 14642 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-9 chr11 51866256 51866456 + 0.947446088118041 NA Intergenic MER5A|DNA|hAT-Charlie -8726 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-31 chr3 57276869 57277257 + 0.947446088118041 NA Intergenic Intergenic 24925 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-18 chr2 167848201 167848477 + 0.947446088118041 NA Intergenic Intergenic -83988 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-11 chr12 102600623 102600966 + 0.947446088118041 NA intron (NM_172584, intron 4 of 9) intron (NM_172584, intron 4 of 9) 45853 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-21 chr2 10309343 10309625 + 0.947446088118041 NA Intergenic Intergenic -60967 NM_001198808 353282 Mm.329991 NM_177386 ENSMUSG00000061186 Sfmbt2 D2Wsu23e|D330030P06Rik Scm-like with four mbt domains 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-25 chr18 32441748 32442112 + 0.947446088118041 NA Intergenic Intergenic -63646 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-25 chr7 19911671 19911913 + 0.947446088118041 NA intron (NM_027514, intron 4 of 7) intron (NM_027514, intron 4 of 7) 9351 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-21 chr16 14352287 14352655 + 0.947446088118041 NA Intergenic B2_Mm2|SINE|B2 -9087 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-45 chr7 114114025 114114257 + 0.947446088118041 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 3640 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-15 chr18 61705870 61706152 + 0.947446088118041 NA intron (NM_172832, intron 1 of 5) intron (NM_172832, intron 1 of 5) 1624 NM_172832 240334 Mm.234457 NM_172832 ENSMUSG00000024579 Pcyox1l BC060677|C630049M13 prenylcysteine oxidase 1 like protein-coding unique_peak1_8_15_-1.09417879218081_3.4529106039096_0.947446088118041 chr16 24447511 24447731 + 0.947446088118041 NA promoter-TSS (NM_001145952) promoter-TSS (NM_001145952) -470 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-4 chr10 14046479 14046833 + 0.947446088118041 NA intron (NM_001358783, intron 2 of 12) intron (NM_001358783, intron 2 of 12) 80277 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-7 chr12 52479922 52480262 + 0.947446088118041 NA intron (NR_136881, intron 2 of 2) intron (NR_136881, intron 2 of 2) 517 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-29 chr2 170128052 170128436 + 0.947446088118041 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 2976 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-6 chr2 13456594 13456834 + 0.947446088118041 NA exon (NM_001081084, exon 16 of 67) exon (NM_001081084, exon 16 of 67) 35162 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-3 chr10 40527473 40527707 + 0.947446088118041 NA Intergenic Intergenic -42772 NM_027572 70840 Mm.332570 NM_027572 ENSMUSG00000019834 Slc22a16 4921504E14Rik|CT2|FLIPT2|OCT6|OKB1 solute carrier family 22 (organic cation transporter), member 16 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-26 chr7 139468138 139468383 + 0.947446088118041 NA intron (NM_183144, intron 2 of 15) intron (NM_183144, intron 2 of 15) 67766 NM_001355162 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-33 chr3 95427660 95427861 + 0.947446088118041 NA intron (NR_033637, intron 1 of 2) CpG 411 NR_033637 100043305 Mm.412052 NR_033637 Gm4349 - SET domain, bifurcated 1 pseudogene pseudo unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-17 chr2 163346836 163347038 + 0.947446088118041 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 51036 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-22 chr17 72961895 72962140 + 0.947446088118041 NA Intergenic Intergenic 43712 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-7 chr8 94973053 94973326 + 0.947446088118041 NA Intergenic Intergenic -3920 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-35 chr9 63735823 63736079 + 0.947446088118041 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 22043 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-10 chr12 91591084 91591356 + 0.947446088118041 NA promoter-TSS (NM_175335) promoter-TSS (NM_175335) -733 NM_175335 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-22 chr5 31617645 31618070 + 0.947446088118041 NA intron (NM_025796, intron 3 of 3) intron (NM_025796, intron 3 of 3) 3906 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-4 chr10 108567805 108568064 + 0.947446088118041 NA intron (NM_001358501, intron 9 of 10) intron (NM_001358501, intron 9 of 10) 132226 NM_203660 368203 Mm.452758 NM_203660 ENSMUSG00000112039 Gm5136 C6.1AL|EG368203 predicted gene 5136 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-16 chr16 15685139 15685402 + 0.947446088118041 NA intron (NM_011159, intron 22 of 85) MTD|LTR|ERVL-MaLR 47404 NM_011159 19090 Mm.71 NM_011159 ENSMUSG00000022672 Prkdc AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip protein kinase, DNA activated, catalytic polypeptide protein-coding common_peak1_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-3 chr5 143050284 143050539 + 0.947446088118041 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 62609 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-25 chr3 37355530 37355820 + 0.947446088118041 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 7022 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-10 chr14 20661789 20662135 + 0.947446088118041 NA exon (NM_001310431, exon 4 of 4) exon (NM_001310431, exon 4 of 4) 2612 NM_001310432 68760 Mm.35789 NM_175132 ENSMUSG00000039376 Synpo2l 1110054M18Rik|Chap synaptopodin 2-like protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-44 chr7 89512008 89512254 + 0.947446088118041 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 5455 NM_029614 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-48 chr8 111712451 111712651 + 0.947446088118041 NA intron (NM_001198839, intron 6 of 6) intron (NM_001198839, intron 6 of 6) 19585 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-26 chr18 33296548 33296828 + 0.947446088118041 NA Intergenic Intergenic -82826 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-20 chr19 58109628 58109949 + 0.947446088118041 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 58621 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-51 chr9 78479519 78479886 + 0.947446088118041 NA exon (NM_010106, exon 5 of 8) exon (NM_010106, exon 5 of 8) 2022 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-7 chr2 104109984 104110241 + 0.947446088118041 NA intron (NM_007652, intron 2 of 3) intron (NM_007652, intron 2 of 3) -12657 NM_026634 68243 Mm.158191 NM_026634 ENSMUSG00000032671 A930018P22Rik - RIKEN cDNA A930018P22 gene protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-2 chr1 74049770 74050167 + 0.947446088118041 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 74479 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-2 chr14 25872510 25872804 + 0.947446088118041 NA exon (NM_013469, exon 4 of 15) exon (NM_013469, exon 4 of 15) 30236 NM_207229 211623 Mm.439926 NM_207229 ENSMUSG00000095304 Plac9a Plac9 placenta specific 9a protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-11 chr7 66688992 66689198 + 0.947446088118041 NA promoter-TSS (NM_001191001) promoter-TSS (NM_001191001) 466 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-5 chr10 40339679 40340007 + 0.947446088118041 NA Intergenic Intergenic -9465 NM_001291817 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-23 chr6 129534412 129534704 + 0.947446088118041 NA intron (NM_020590, intron 1 of 3) intron (NM_020590, intron 1 of 3) -1274 NR_045270 100504641 Mm.398286 NR_045270 ENSMUSG00000097675 1700101I11Rik - RIKEN cDNA 1700101I11 gene ncRNA unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-23 chr17 75406906 75407122 + 0.947446088118041 NA Intergenic Intergenic -28891 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-43 chr6 114449180 114449476 + 0.947446088118041 NA intron (NM_008285, intron 2 of 2) intron (NM_008285, intron 2 of 2) -9194 NM_001317124 15465 Mm.333327 NM_008285 ENSMUSG00000053004 Hrh1 Bphs|H1R|HH1R|Hir histamine receptor H1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-34 chr4 105224352 105224639 + 0.947446088118041 NA intron (NM_080555, intron 5 of 5) intron (NM_080555, intron 5 of 5) 67148 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-2 chr1 192778385 192778778 + 0.947446088118041 NA Intergenic Intergenic -7362 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041 chr1 133954758 133955036 + 0.947446088118041 NA Intergenic Intergenic -33496 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-8 chr11 96017899 96018159 + 0.947446088118041 NA Intergenic Intergenic -6516 NM_008119 14607 Mm.248452 NM_008119 ENSMUSG00000014351 Gip - gastric inhibitory polypeptide protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-40 chr5 144223808 144224080 + 0.947446088118041 NA promoter-TSS (NM_001356992) promoter-TSS (NM_001356992) -329 NM_001356993 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-24 chr17 87102985 87103303 + 0.947446088118041 NA Intergenic Intergenic -4535 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-6 chr10 59576022 59576321 + 0.947446088118041 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 40521 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak1_8_15_-1.09417879218081_3.4529106039096_0.947446088118041 chr1 89112693 89112917 + 0.947446088118041 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 42390 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-18 chr17 31856157 31856406 + 0.947446088118041 NA promoter-TSS (NM_010831) promoter-TSS (NM_010831) -477 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-6 chr11 74926634 74926971 + 0.947446088118041 NA intron (NM_001002764, intron 1 of 18) intron (NM_001002764, intron 1 of 18) 930 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-27 chr2 72294211 72294440 + 0.947446088118041 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 8624 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-13 chr15 102245986 102246240 + 0.947446088118041 NA exon (NM_001042727, exon 1 of 8) exon (NM_001042727, exon 1 of 8) 387 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-28 chr5 42155328 42155530 + 0.947446088118041 NA intron (NR_131130, intron 1 of 2) intron (NR_131130, intron 1 of 2) 87469 NR_131130 433882 Mm.319353 NR_131130 ENSMUSG00000067285 Gm16223 EG433882 predicted gene 16223 ncRNA unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-11 chr13 24761752 24762137 + 0.947446088118041 NA promoter-TSS (NM_020567) promoter-TSS (NM_020567) -7 NM_020567 57441 Mm.12239 NM_020567 ENSMUSG00000006715 Gmnn AW546347|Gem geminin protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041 chr1 193518753 193519058 + 0.947446088118041 NA Intergenic Intergenic -11375 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-49 chr8 126548932 126549288 + 0.947446088118041 NA Intergenic Intergenic 44326 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-32 chrX 159879505 159879730 + 0.947446088118041 NA intron (NM_001135728, intron 3 of 12) intron (NM_001135728, intron 3 of 12) 39149 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-10 chr5 53589816 53590068 + 0.947446088118041 NA promoter-TSS (NM_001277116) promoter-TSS (NM_001277116) -404 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-17 chr15 61244840 61245053 + 0.947446088118041 NA Intergenic Intergenic -323676 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-24 chr6 134829646 134829925 + 0.947446088118041 NA promoter-TSS (NM_177687) promoter-TSS (NM_177687) -414 NM_177687 232430 Mm.267010 NM_177687 ENSMUSG00000032652 Crebl2 AI046348|B230205M03 cAMP responsive element binding protein-like 2 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-8 chr11 49337499 49337714 + 0.947446088118041 NA Intergenic Intergenic -2928 NM_147065 259068 Mm.377819 NM_147065 ENSMUSG00000045421 Olfr1390 MOR256-2 olfactory receptor 1390 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-19 chr3 123337823 123338144 + 0.947446088118041 NA intron (NM_027135, intron 11 of 22) intron (NM_027135, intron 11 of 22) 48007 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-2 chr3 144971805 144972014 + 0.947446088118041 NA intron (NM_207208, intron 1 of 13) intron (NM_207208, intron 1 of 13) 3136 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-30 chr3 30260743 30261031 + 0.947446088118041 NA intron (NM_001361034, intron 1 of 16) intron (NM_001361034, intron 1 of 16) -247683 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-42 chr6 87867128 87867452 + 0.947446088118041 NA Intergenic Intergenic -16184 NM_001355195 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-38 chr5 143518701 143519014 + 0.947446088118041 NA intron (NM_001347530, intron 1 of 6) intron (NM_001347530, intron 1 of 6) 9136 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-46 chr8 36824219 36824433 + 0.947446088118041 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -91272 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-41 chr6 70845368 70845704 + 0.947446088118041 NA intron (NM_001313918, intron 1 of 2) MER5A1|DNA|hAT-Charlie 1021 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-10 chr12 100275873 100276266 + 0.947446088118041 NA promoter-TSS (NR_045741) promoter-TSS (NR_045741) -540 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-29 chr9 44343416 44343681 + 0.947446088118041 NA intron (NM_013551, intron 1 of 13) intron (NM_013551, intron 1 of 13) 680 NM_013551 15288 Mm.247676 NM_013551 ENSMUSG00000032126 Hmbs PBGD|T25658|Ups|Uros1 hydroxymethylbilane synthase protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-12 chr15 66848240 66848484 + 0.947446088118041 NA intron (NM_009375, intron 46 of 47) intron (NM_009375, intron 46 of 47) -16533 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-31 chr9 63655338 63655643 + 0.947446088118041 NA intron (NM_016769, intron 6 of 8) intron (NM_016769, intron 6 of 8) 52844 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-7 chr10 89506408 89506649 + 0.947446088118041 NA exon (NM_001163700, exon 1 of 9) exon (NM_001163700, exon 1 of 9) 130 NM_001163700 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-2 chr1 182592400 182592766 + 0.947446088118041 NA intron (NM_130890, intron 2 of 20) intron (NM_130890, intron 2 of 20) 27576 NM_130890 170725 Mm.189201 NM_130890 ENSMUSG00000038599 Capn8 nCL-2|nCL-2' calpain 8 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-6 chr10 80960654 80960887 + 0.947446088118041 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 30679 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak1_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-2 chr13 51971789 51972111 + 0.947446088118041 NA Intergenic Intergenic -124791 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-27 chr4 141604155 141604433 + 0.947446088118041 NA intron (NM_133754, intron 1 of 8) intron (NM_133754, intron 1 of 8) 1758 NM_133754 74202 Mm.490327 NM_133754 ENSMUSG00000006219 Fblim1 2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s) filamin binding LIM protein 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-13 chr13 75796230 75796452 + 0.947446088118041 NA Intergenic Intergenic -43544 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-32 chr3 90599013 90599413 + 0.947446088118041 NA intron (NM_001355602, intron 1 of 2) B3A|SINE|B2 -1001 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-4 chr2 14054960 14055179 + 0.947446088118041 NA intron (NM_001012396, intron 1 of 5) intron (NM_001012396, intron 1 of 5) 966 NM_001012396 30963 Mm.241205 NM_013935 ENSMUSG00000063275 Hacd1 Ptpla 3-hydroxyacyl-CoA dehydratase 1 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-11 chr14 99329022 99329294 + 0.947446088118041 NA Intergenic Intergenic 30467 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-3 chr10 41477599 41477811 + 0.947446088118041 NA promoter-TSS (NM_001358838) promoter-TSS (NM_001358838) -305 NM_001358838 171580 Mm.290431 NM_138315 ENSMUSG00000019823 Mical1 MICAL|MICAL-1|Nical microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-36 chr5 123862957 123863160 + 0.947446088118041 NA TTS (NM_030701) TTS (NM_030701) 2458 NM_030701 80885 Mm.440567 NM_030701 ENSMUSG00000045502 Hcar2 Gpr109a|Gpr109b|HM74|Niacr1|PUMA-G|Pumag|mHM74b hydroxycarboxylic acid receptor 2 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-36 chrX 7186395 7186613 + 0.947446088118041 NA intron (NM_001243762, intron 3 of 13) intron (NM_001243762, intron 3 of 13) 2210 NM_016691 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding common_peak2_17_7_0.898766228245949_3.44938311412297_0.947446088118041-3 chr8 67725148 67725374 + 0.947446088118041 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 93034 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041 chr1 134103732 134104002 + 0.947446088118041 NA Intergenic Intergenic -7375 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-16 chr15 34350847 34351040 + 0.947446088118041 NA intron (NM_001256161, intron 3 of 3) intron (NM_001256161, intron 3 of 3) 6929 NM_001256161 77358 Mm.402759 NM_001256161 ENSMUSG00000094447 9430069I07Rik - RIKEN cDNA 9430069I07 gene protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-26 chr4 63056626 63056838 + 0.947446088118041 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 91158 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-4 chr15 32260751 32260972 + 0.947446088118041 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 16048 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-12 chr13 52018316 52018522 + 0.947446088118041 NA Intergenic Intergenic -78322 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041-21 chr4 142239002 142239252 + 0.947446088118041 NA exon (NM_001109685, exon 1 of 8) exon (NM_001109685, exon 1 of 8) 274 NM_001109685 71529 Mm.255986 NM_144531 ENSMUSG00000040606 Kazn 2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin kazrin, periplakin interacting protein protein-coding unique_peak2_8_15_-1.09417879218081_3.4529106039096_0.947446088118041 chr1 40436819 40437018 + 0.947446088118041 NA intron (NM_001294171, intron 1 of 7) intron (NM_001294171, intron 1 of 7) -2711 NM_001025602 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-50 chr9 75423405 75423700 + 0.947446088118041 NA Intergenic B1_Mus1|SINE|Alu 13368 NR_040719 71274 Mm.399152 NR_040719 ENSMUSG00000097021 4933433G15Rik 4921522K19Rik RIKEN cDNA 4933433G15 gene ncRNA unique_peak2_7_15_-1.26290497620896_3.36854751189552_0.947446088118041-37 chrX 139685145 139685423 + 0.947446088118041 NA exon (NM_001081499, exon 1 of 21) exon (NM_001081499, exon 1 of 21) 288 NM_001081499 245638 Mm.275869 NM_001081499 ENSMUSG00000042473 Tbc1d8b 4921505D17Rik|9030605E16Rik TBC1 domain family, member 8B protein-coding unique_peak1_17_7_0.898766228245949_3.44938311412297_0.947446088118041-39 chr5 144150855 144151090 + 0.947446088118041 NA intron (NM_001081109, intron 6 of 13) intron (NM_001081109, intron 6 of 13) -39314 NM_010800 17341 Mm.386767 NM_010800 ENSMUSG00000052271 Bhlha15 1810009C13Rik|Bhlhb8|MIST-1|Mist1 basic helix-loop-helix family, member a15 protein-coding common_peak2_306_289_-0.217843192500276_8.0709874937648_0.947417337849245 chr13 5861628 5863873 + 0.947417337849245 NA intron (NM_011803, intron 1 of 3) intron (NM_011803, intron 1 of 3) 1261 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_132_85_0.337502769843935_6.59501613962407_0.947410509255305 chr6 17065107 17066019 + 0.947410509255305 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 414 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_103_109_-0.369931498216036_6.59639396441664_0.94741050925528 chr9 63742217 63743923 + 0.94741050925528 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 14924 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_245_236_-0.244003058643611_7.76674171957645_0.947230617797648 chr1 161248225 161251132 + 0.947230617797648 NA intron (NM_001303408, intron 1 of 5) intron (NM_001303408, intron 1 of 5) 1532 NM_007453 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak2_144_146_-0.312157404278462_7.04359364269713_0.947105963970271 chr2 60639317 60640887 + 0.947105963970271 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 33591 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_144_146_-0.312157404278462_7.04359364269713_0.947105963970271 chr9 58487873 58489368 + 0.947105963970271 NA promoter-TSS (NM_176921) promoter-TSS (NM_176921) 17 NM_176921 319477 Mm.153674 NM_176921 ENSMUSG00000066607 6030419C18Rik - RIKEN cDNA 6030419C18 gene protein-coding common_peak1_178_118_0.294459809028564_7.04204766782223_0.947105963970271 chr9 110116470 110118201 + 0.947105963970271 NA intron (NM_001252682, intron 1 of 22) CpG 281 NM_001252682 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak2_143_146_-0.322071055310148_7.03863681718129_0.947105963970271 chr10 24477827 24479285 + 0.947105963970271 NA Intergenic Intergenic -116886 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_155_101_0.319838475564585_6.83234457975379_0.946255204401567 chr1 172082157 172083537 + 0.946255204401567 NA promoter-TSS (NM_021607) promoter-TSS (NM_021607) -98 NM_021607 59287 Mm.218203 NM_021607 ENSMUSG00000003458 Ncstn 9430068N19Rik|AA727311|Aph2|D1Dau13e|Kiaa0253|Nct|mKIAA0253 nicastrin protein-coding common_peak1_154_101_0.310626116761921_6.82773840035246_0.946255204401567 chr3 19428356 19430343 + 0.946255204401567 NA Intergenic B1_Mur2|SINE|Alu -79246 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak1_155_101_0.319838475564585_6.83234457975379_0.946255204401567-2 chr19 30030485 30031463 + 0.946255204401567 NA intron (NM_144873, intron 1 of 15) CpG 461 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak1_123_127_-0.336605440020462_6.83169727998977_0.946255204401543 chr8 56550327 56551926 + 0.946255204401543 NA promoter-TSS (NM_015791) promoter-TSS (NM_015791) -8 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak1_122_127_-0.348204830172107_6.82589758491395_0.946255204401543 chr17 84111902 84113456 + 0.946255204401543 NA Intergenic Intergenic 34019 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_123_127_-0.336605440020462_6.83169727998977_0.946255204401543 chr4 135271196 135272761 + 0.946255204401543 NA intron (NM_013885, intron 1 of 5) intron (NM_013885, intron 1 of 5) 782 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_77_85_-0.426945957592774_6.21279177590571_0.945872376852013 chr12 86082603 86083539 + 0.945872376852013 NA intron (NM_029601, intron 1 of 7) intron (NM_029601, intron 1 of 7) 510 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak1_103_64_0.38906040228017_6.21689801416854_0.945872376852013 chr8 85080204 85081221 + 0.945872376852013 NA promoter-TSS (NM_026399) promoter-TSS (NM_026399) 34 NM_026399 67836 Mm.334680 NM_026399 ENSMUSG00000005150 Wdr83 1500041N16Rik|Morg1 WD repeat domain containing 83 protein-coding common_peak1_143_93_0.323012437848579_6.71609507060193_0.945752090589647 chr3 52087868 52089390 + 0.945752090589647 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 16377 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_192_189_-0.272703237860756_7.43350398940057_0.944604730093525 chr11 31368379 31370239 + 0.944604730093525 NA intron (NM_011491, intron 1 of 3) CpG 752 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_94_101_-0.390659968245714_6.47709535784864_0.944544436020117 chr14 34673912 34674738 + 0.944544436020117 NA 5' UTR (NM_001301330, exon 1 of 19) 5' UTR (NM_001301330, exon 1 of 19) 397 NM_001301330 218914 Mm.27957 NM_001004436 ENSMUSG00000041408 Wapl A530089A20Rik|BC037674|DIF-2|FOE|Wapal WAPL cohesin release factor protein-coding common_peak1_123_78_0.359613811802435_6.48358765407832_0.944544436020117-2 chr8 121477196 121478527 + 0.944544436020117 NA Intergenic Intergenic 64093 NM_001357260 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding common_peak1_122_78_0.34801442165079_6.4777879590025_0.944544436020117 chr6 34608430 34609982 + 0.944544436020117 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 10702 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_123_78_0.359613811802435_6.48358765407832_0.944544436020117 chr1 191396550 191397633 + 0.944544436020117 NA promoter-TSS (NM_144880) promoter-TSS (NM_144880) -50 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_113_71_0.373019075757044_6.35643453932083_0.943815179304744-2 chr2 131901757 131902757 + 0.943815179304744 NA Intergenic Intergenic -7671 NM_011170 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding common_peak2_113_71_0.373019075757044_6.35643453932083_0.943815179304744 chr8 81866097 81866980 + 0.943815179304744 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 523976 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak1_113_71_0.373019075757044_6.35643453932083_0.943815179304744 chr15 102256526 102258071 + 0.943815179304744 NA 5' UTR (NM_011244, exon 1 of 10) 5' UTR (NM_011244, exon 1 of 10) 224 NM_011244 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_86_93_-0.398840228072917_6.35516873764118_0.943815179304719 chr5 35574497 35575455 + 0.943815179304719 NA promoter-TSS (NM_030208) promoter-TSS (NM_030208) 94 NM_030208 78890 Mm.98522 NM_030208 ENSMUSG00000029097 Trmt44 2310079F23Rik|Mettl19 tRNA methyltransferase 44 protein-coding common_peak2_86_93_-0.398840228072917_6.35516873764118_0.943815179304719 chr5 35574506 35575506 + 0.943815179304719 NA promoter-TSS (NM_030208) promoter-TSS (NM_030208) 64 NM_030208 78890 Mm.98522 NM_030208 ENSMUSG00000029097 Trmt44 2310079F23Rik|Mettl19 tRNA methyltransferase 44 protein-coding common_peak2_86_93_-0.398840228072917_6.35516873764118_0.943815179304719-2 chr7 63937864 63938906 + 0.943815179304719 NA exon (NM_021366, exon 1 of 2) exon (NM_021366, exon 1 of 2) 530 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_490_350_0.179443407770515_8.54504892418982_0.943593908108197 chr11 77806756 77810615 + 0.943593908108197 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 7387 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_77_46_0.444729945431686_5.77695382439348_0.943512743618327 chr15 13365784 13366507 + 0.943512743618327 NA Intergenic ID_B1|SINE|B4 -192470 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_77_46_0.444729945431686_5.77695382439348_0.943512743618327-2 chr5 149388637 149389531 + 0.943512743618327 NA Intergenic Intergenic -22665 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_77_46_0.444729945431686_5.77695382439348_0.943512743618327-4 chr8 11556969 11557846 + 0.943512743618327 NA intron (NM_001302451, intron 2 of 2) CpG 950 NM_011919 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_77_46_0.444729945431686_5.77695382439348_0.943512743618327-3 chr7 109548047 109549249 + 0.943512743618327 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 28516 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak1_77_46_0.444729945431686_5.77695382439348_0.943512743618327 chr11 93994377 93995125 + 0.943512743618327 NA Intergenic Intergenic -1340 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak2_134_137_-0.323375686697375_6.94683661342948_0.943204537362406 chr1 20616287 20618040 + 0.943204537362406 NA intron (NM_153179, intron 1 of 66) intron (NM_153179, intron 1 of 66) 894 NM_153179 241035 Mm.249253 NM_153179 ENSMUSG00000043760 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 protein-coding common_peak1_375_264_0.20264781513176_8.15117245701644_0.943105644078816 chr8 70774308 70777626 + 0.943105644078816 NA promoter-TSS (NR_029440) promoter-TSS (NR_029440) 745 NM_008841 18709 Mm.12945 NM_008841 ENSMUSG00000031834 Pik3r2 p85beta phosphoinositide-3-kinase regulatory subunit 2 protein-coding common_peak2_246_168_0.249672189353793_7.52571553095908_0.942736154443063 chr14 121035451 121037228 + 0.942736154443063 NA intron (NM_134082, intron 1 of 26) CpG 765 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak2_219_213_-0.256744644196695_7.6130946643028_0.942198101777524 chr2 51147003 51149045 + 0.942198101777524 NA intron (NM_028810, intron 2 of 4) CpG 1087 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak1_70_78_-0.439160006470372_6.08420074494192_0.942020504123675 chr8 79206946 79208069 + 0.942020504123675 NA Intergenic Intergenic 41076 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding common_peak2_62_71_-0.476554703195478_5.93164764984457_0.940907383351658 chr19 18670926 18671781 + 0.940907383351658 NA intron (NM_026120, intron 1 of 7) CpG 573 NM_026120 67383 Mm.306602 NM_026120 ENSMUSG00000024726 Carnmt1 2410127L17Rik carnosine N-methyltransferase 1 protein-coding common_peak2_62_71_-0.476554703195478_5.93164764984457_0.940907383351658-2 chr6 50354478 50355677 + 0.940907383351658 NA intron (NM_027881, intron 2 of 21) intron (NM_027881, intron 2 of 21) 27760 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_86_52_0.427828169041522_5.94183453908396_0.940907383351645 chr14 20607090 20607859 + 0.940907383351645 NA 5' UTR (NM_030180, exon 2 of 21) 5' UTR (NM_030180, exon 2 of 21) 10880 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding common_peak1_342_239_0.214016638185178_8.01389891470111_0.940478566204154 chr5 123137812 123140520 + 0.940478566204154 NA Intergenic CpG -3027 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak1_145_94_0.327504847661735_6.73360803216181_0.939670183723699 chr19 4625166 4626417 + 0.939670183723699 NA promoter-TSS (NM_023131) promoter-TSS (NM_023131) -174 NM_023131 19671 Mm.391143 NM_023131 ENSMUSG00000024889 Rce1 D19Ertd283e|D19Ertd98e Ras converting CAAX endopeptidase 1 protein-coding common_peak1_114_119_-0.35143537463163_6.7311729082927_0.939670183723675 chr1 132355507 132357075 + 0.939670183723675 NA TTS (NM_001311108) TTS (NM_001311108) 11657 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_37_46_-0.58542539713249_5.26187615311139_0.939626589724295-5 chr17 31563837 31564386 + 0.939626589724295 NA promoter-TSS (NM_016670) promoter-TSS (NM_016670) -662 NR_027493 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak2_36_46_-0.623628110620196_5.24277479636754_0.939626589724295 chr1 6307071 6307889 + 0.939626589724295 NA Intergenic Intergenic -51851 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak1_36_46_-0.623628110620196_5.24277479636754_0.939626589724295-2 chr4 155846641 155847236 + 0.939626589724295 NA promoter-TSS (NM_010091) promoter-TSS (NM_010091) -464 NM_010091 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak2_36_46_-0.623628110620196_5.24277479636754_0.939626589724295-2 chr16 57606660 57607090 + 0.939626589724295 NA promoter-TSS (NM_025599) promoter-TSS (NM_025599) -8 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak2_37_46_-0.58542539713249_5.26187615311139_0.939626589724295-2 chr12 31055743 31056391 + 0.939626589724295 NA Intergenic Intergenic -17901 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding common_peak1_36_46_-0.623628110620196_5.24277479636754_0.939626589724295-3 chr6 71831338 71831718 + 0.939626589724295 NA intron (NM_001362138, intron 1 of 13) CpG 208 NM_001253686 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding common_peak1_37_46_-0.58542539713249_5.26187615311139_0.939626589724295-2 chr5 35728561 35729375 + 0.939626589724295 NA 5' UTR (NM_194344, exon 1 of 18) 5' UTR (NM_194344, exon 1 of 18) 308 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding common_peak2_37_46_-0.58542539713249_5.26187615311139_0.939626589724295 chr11 70409442 70410027 + 0.939626589724295 NA intron (NM_029231, intron 1 of 16) CpG 297 NM_029231 75273 Mm.340601 NM_029231 ENSMUSG00000018921 Pelp1 4930563C04Rik|MNAR proline, glutamic acid and leucine rich protein 1 protein-coding common_peak2_37_46_-0.58542539713249_5.26187615311139_0.939626589724295-4 chr16 85897494 85898340 + 0.939626589724295 NA intron (NM_011782, intron 1 of 7) intron (NM_011782, intron 1 of 7) 3208 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak2_37_46_-0.58542539713249_5.26187615311139_0.939626589724295-3 chr14 54233189 54233927 + 0.939626589724295 NA Intergenic Intergenic 20371 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_36_46_-0.623628110620196_5.24277479636754_0.939626589724295 chr18 38250277 38250509 + 0.939626589724295 NA promoter-TSS (NR_015475) promoter-TSS (NR_015475) 144 NM_024179 66839 Mm.281086 NM_024179 ENSMUSG00000024442 0610009O20Rik 2700004E22Rik|Dele|Kiaa0141 RIKEN cDNA 0610009O20 gene protein-coding common_peak1_37_46_-0.58542539713249_5.26187615311139_0.939626589724295 chr17 80808798 80809410 + 0.939626589724295 NA Intergenic Intergenic -81079 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-3 chr19 21077645 21078660 + 0.939626589724289 NA Intergenic Intergenic -26558 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-6 chr3 122515029 122515487 + 0.939626589724289 NA intron (NM_013867, intron 7 of 11) intron (NM_013867, intron 7 of 11) 26423 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA common_peak2_55_31_0.52464411421868_5.26232205710934_0.939626589724289 chr11 75404076 75404449 + 0.939626589724289 NA intron (NM_001102611, intron 10 of 10) intron (NM_001102611, intron 10 of 10) 18361 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-4 chr2 12418618 12419383 + 0.939626589724289 NA intron (NM_001355537, intron 1 of 13) CpG 460 NM_001355537 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Mindy3 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958|Fam188a MINDY lysine 48 deubiquitinase 3 protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-9 chr8 3430757 3431573 + 0.939626589724289 NA intron (NM_133962, intron 4 of 19) intron (NM_133962, intron 4 of 19) 36483 NM_026951 69129 Mm.45279 NM_026951 ENSMUSG00000069633 Pex11g 1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma peroxisomal biogenesis factor 11 gamma protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-7 chr6 17637205 17638222 + 0.939626589724289 NA intron (NM_007604, intron 1 of 9) intron (NM_007604, intron 1 of 9) 703 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding unique_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289 chr9 57157614 57158275 + 0.939626589724289 NA intron (NM_025417, intron 1 of 7) intron (NM_025417, intron 1 of 7) 355 NM_025417 66199 Mm.41687 NM_025417 ENSMUSG00000032299 Commd4 1110039H05Rik COMM domain containing 4 protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-8 chr7 3617411 3617977 + 0.939626589724289 NA intron (NM_025348, intron 2 of 3) intron (NM_025348, intron 2 of 3) 321 NM_025348 66091 Mm.17851 NM_025348 ENSMUSG00000035674 Ndufa3 1010001M12Rik|1700022J01Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289 chr11 69365886 69366465 + 0.939626589724289 NA intron (NM_146019, intron 1 of 39) intron (NM_146019, intron 1 of 39) 3251 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-2 chr18 7004045 7004741 + 0.939626589724289 NA intron (NM_177595, intron 1 of 6) intron (NM_177595, intron 1 of 6) 386 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak1_55_31_0.52464411421868_5.26232205710934_0.939626589724289-5 chr2 60639314 60639667 + 0.939626589724289 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 34203 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_55_31_0.52464411421868_5.26232205710934_0.939626589724289-2 chr9 95192632 95193166 + 0.939626589724289 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 214371 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_193_129_0.28218776180938_7.16346169393314_0.938426755972622 chr19 55315522 55316811 + 0.938426755972622 NA promoter-TSS (NM_001033573) promoter-TSS (NM_001033573) 109 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak2_157_158_-0.302370268582323_7.16169782099319_0.938426755972622 chr8 35666106 35667646 + 0.938426755972622 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -77856 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_70_41_0.47230331892797_5.62846908224275_0.938077053400193-3 chr17 34605903 34606648 + 0.938077053400193 NA intron (NM_001163379, intron 1 of 6) intron (NM_001163379, intron 1 of 6) 414 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak1_70_41_0.47230331892797_5.62846908224275_0.938077053400193 chr1 60342407 60343538 + 0.938077053400193 NA promoter-TSS (NM_001313721) promoter-TSS (NM_001313721) -328 NM_030013 77951 Mm.197640 NM_030013 ENSMUSG00000049439 Cyp20a1 A930011N14Rik|Cypm cytochrome P450, family 20, subfamily a, polypeptide 1 protein-coding common_peak2_49_58_-0.520344187209533_5.62247095575708_0.938077053400193 chr6 71440984 71441762 + 0.938077053400193 NA promoter-TSS (NM_024288) promoter-TSS (NM_024288) -736 NM_024288 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding common_peak2_49_58_-0.520344187209533_5.62247095575708_0.938077053400193-2 chr8 106169419 106170177 + 0.938077053400193 NA intron (NM_001357381, intron 1 of 9) intron (NM_001357381, intron 1 of 9) 877 NM_001357381 330836 Mm.46749 NM_178798 ENSMUSG00000031904 Slc7a6 AI643885|LAT-2|LAT3|y+LAT-2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 protein-coding common_peak1_70_41_0.47230331892797_5.62846908224275_0.938077053400193-2 chr1 184708958 184709939 + 0.938077053400193 NA Intergenic Intergenic -3049 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA common_peak1_70_41_0.47230331892797_5.62846908224275_0.938077053400193-4 chr3 88488851 88489415 + 0.938077053400193 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 4179 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_135_138_-0.323220174533544_6.95733098545674_0.938026057846604 chr8 70352412 70353309 + 0.938026057846604 NA exon (NM_001122829, exon 1 of 24) exon (NM_001122829, exon 1 of 24) 419 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_168_111_0.299571423488339_6.95714063380177_0.938026057846604 chr10 80755213 80756381 + 0.938026057846604 NA intron (NM_199322, intron 1 of 27) intron (NM_199322, intron 1 of 27) 594 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_135_138_-0.323220174533544_6.95733098545674_0.938026057846604 chr5 105698935 105700931 + 0.938026057846604 NA promoter-TSS (NM_178701) promoter-TSS (NM_178701) -36 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_453_323_0.182687327636977_8.43119366670311_0.937838248704352 chr19 6276896 6279840 + 0.937838248704352 NA intron (NM_010119, intron 1 of 4) intron (NM_010119, intron 1 of 4) 1472 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak1_181_120_0.29422402760816_7.06597525107867_0.937427438064158 chr9 108516625 108518176 + 0.937427438064158 NA intron (NM_175143, intron 1 of 9) CpG 313 NM_175143 69232 Mm.335449 NM_175143 ENSMUSG00000006673 Qrich1 2610028H07Rik|b2b2404Clo glutamine-rich 1 protein-coding common_peak1_124_79_0.352972686445581_6.49841443811015_0.937394891182587 chr3 30602178 30603133 + 0.937394891182587 NA 5' UTR (NM_030557, exon 1 of 8) 5' UTR (NM_030557, exon 1 of 8) 568 NM_001289622 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding common_peak2_104_65_0.380742495841561_6.23476536727923_0.93727528838897 chr3 89912236 89913514 + 0.93727528838897 NA intron (NM_010559, intron 1 of 9) CpG 321 NM_001310676 16194 Mm.2856 NM_010559 ENSMUSG00000027947 Il6ra CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r interleukin 6 receptor, alpha protein-coding common_peak1_62_36_0.483916932617884_5.45141183193789_0.936258361511365 chr8 105292876 105293539 + 0.936258361511365 NA intron (NM_001357379, intron 4 of 12) intron (NM_001357379, intron 4 of 12) 2906 NM_001357379 277978 Mm.40228 NM_177788 ENSMUSG00000043251 Exoc3l C730015A04Rik|Exoc3l1 exocyst complex component 3-like protein-coding common_peak2_62_36_0.483916932617884_5.45141183193789_0.936258361511365 chr17 46933443 46934013 + 0.936258361511365 NA intron (NM_146078, intron 45 of 46) B3A|SINE|B2 23243 NM_008938 19133 Mm.291370 NM_008938 ENSMUSG00000023978 Prph2 AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds peripherin 2 protein-coding common_peak2_43_52_-0.548745051966138_5.45354792858013_0.936258361511353-6 chr9 107634111 107635005 + 0.936258361511353 NA intron (NM_008138, intron 1 of 8) RLTR31D_MM|LTR|ERVK 784 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak1_43_52_-0.548745051966138_5.45354792858013_0.936258361511353 chr3 137332212 137332526 + 0.936258361511353 NA Intergenic Intergenic -8709 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak2_43_52_-0.548745051966138_5.45354792858013_0.936258361511353-4 chr2 137412641 137413378 + 0.936258361511353 NA Intergenic Intergenic -296489 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_43_52_-0.548745051966138_5.45354792858013_0.936258361511353-2 chr6 98956183 98956689 + 0.936258361511353 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 71862 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_43_52_-0.548745051966138_5.45354792858013_0.936258361511353-3 chr16 84702922 84703723 + 0.936258361511353 NA Intergenic CpG -9701 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA common_peak2_43_52_-0.548745051966138_5.45354792858013_0.936258361511353-2 chr15 38707817 38708564 + 0.936258361511353 NA Intergenic Intergenic 20326 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak2_43_52_-0.548745051966138_5.45354792858013_0.936258361511353-5 chr7 30094751 30095718 + 0.936258361511353 NA intron (NM_011981, intron 1 of 2) intron (NM_011981, intron 1 of 2) 158 NM_011981 26466 Mm.195092 NM_011981 ENSMUSG00000049421 Zfp260 AI480997|Ozrf1|PEX1|Zfp63|Znf260 zinc finger protein 260 protein-coding common_peak2_43_52_-0.548745051966138_5.45354792858013_0.936258361511353 chr12 9839466 9840077 + 0.936258361511353 NA Intergenic Intergenic 265329 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding common_peak1_182_180_-0.278909195126119_7.36039128952015_0.936253055596148 chr1 134097504 134099151 + 0.936253055596148 NA Intergenic Intergenic -12915 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_220_149_0.262400337931401_7.36001885946158_0.936253055596148 chr11 120348720 120350119 + 0.936253055596148 NA promoter-TSS (NM_001313923) promoter-TSS (NM_001313923) 741 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak2_114_72_0.365630662096871_6.37263988992845_0.936024642658692 chr15 97784406 97785141 + 0.936024642658692 NA intron (NM_026353, intron 1 of 2) CpG 408 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak2_87_94_-0.397735185307132_6.37098801567738_0.936024642658667 chr11 121353642 121354805 + 0.936024642658667 NA intron (NM_025793, intron 1 of 9) CpG 224 NM_025793 66840 Mm.103986 NM_025793 ENSMUSG00000025173 Wdr45b 0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l WD repeat domain 45B protein-coding common_peak1_250_240_-0.239324896708767_7.79322688787558_0.935561505249255 chr1 55052147 55054578 + 0.935561505249255 NA intron (NM_026424, intron 1 of 3) intron (NM_026424, intron 1 of 3) 592 NM_001039710 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding common_peak2_157_103_0.310072968560941_6.85547620242156_0.935083268254793 chr9 63701100 63702818 + 0.935083268254793 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 56035 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_135_87_0.336289279552666_6.62757625841363_0.934287088487906 chr12 104056106 104057783 + 0.934287088487906 NA Intergenic Intergenic -12501 NM_026535 68054 Mm.20286 NM_026535 ENSMUSG00000041567 Serpina12 4632419J12Rik serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 protein-coding common_peak2_146_95_0.322176265299109_6.74605063337071_0.93370220972035 chr19 5877297 5878006 + 0.93370220972035 NA promoter-TSS (NM_001361973) promoter-TSS (NM_001361973) -171 NM_001361973 107375 Mm.5323 NM_134154 ENSMUSG00000024818 Slc25a45 AW491445 solute carrier family 25, member 45 protein-coding common_peak2_136_139_-0.323067442829187_6.96774929553037_0.932930589962211 chr15 58415476 58416313 + 0.932930589962211 NA intron (NM_145959, intron 1 of 23) CpG 426 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding common_peak1_169_112_0.295198834528654_6.96777837967952_0.932930589962211 chr7 109635463 109637461 + 0.932930589962211 NA Intergenic Intergenic -19315 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_71_79_-0.437271825787902_6.10329218199341_0.932664372754147 chr12 86082606 86083298 + 0.932664372754147 NA intron (NM_029601, intron 1 of 7) intron (NM_029601, intron 1 of 7) 391 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak1_96_59_0.404719958802559_6.1092505750098_0.932664372754135-2 chr5 121398010 121398998 + 0.932664372754135 NA intron (NM_172722, intron 1 of 23) MIR3|SINE|MIR 522 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding common_peak2_96_59_0.404719958802559_6.1092505750098_0.932664372754135 chr1 191397297 191398122 + 0.932664372754135 NA promoter-TSS (NM_144880) promoter-TSS (NM_144880) -668 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_96_59_0.404719958802559_6.1092505750098_0.932664372754135 chr1 138962914 138963980 + 0.932664372754135 NA promoter-TSS (NM_001166501) promoter-TSS (NM_001166501) -262 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding common_peak1_96_59_0.404719958802559_6.1092505750098_0.932664372754135-3 chr7 89562824 89563600 + 0.932664372754135 NA Intergenic Intergenic -36025 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-7 chr4 116557141 116557422 + 0.932560489028298 NA promoter-TSS (NM_029868) promoter-TSS (NM_029868) -446 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding common_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-3 chrX 103493637 103493989 + 0.932560489028298 NA intron (NR_015508, intron 1 of 2) CpG 255 NR_015508 70252 Mm.380486 NR_015508 ENSMUSG00000097571 Jpx 2010000I03Rik|2510040I06Rik|Enox Jpx transcript, Xist activator (non-protein coding) ncRNA unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-2 chr15 53541431 53541940 + 0.932560489028298 NA intron (NM_177225, intron 4 of 4) intron (NM_177225, intron 4 of 4) 72594 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-4 chr12 64918093 64918524 + 0.932560489028298 NA intron (NM_001025605, intron 1 of 4) CpG 397 NM_001025605 217648 Mm.341586 NM_001025605 ENSMUSG00000047227 Gm527 - predicted gene 527 protein-coding common_peak1_22_31_-0.750091718630501_4.62495414068475_0.932560489028298 chr2 4421373 4421587 + 0.932560489028298 NA intron (NM_001177843, intron 1 of 23) intron (NM_001177843, intron 1 of 23) 20504 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_37_19_0.647235359657785_4.64554577471625_0.932560489028298-3 chr3 122209709 122209997 + 0.932560489028298 NA Intergenic Intergenic -35704 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-10 chrX 96020722 96021167 + 0.932560489028298 NA Intergenic Intergenic -63970 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298 chr1 183221150 183221462 + 0.932560489028298 NA intron (NM_001278219, intron 1 of 8) CpG 223 NM_026866 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-6 chr17 14992514 14992796 + 0.932560489028298 NA intron (NM_198104, intron 1 of 3) CpG 13791 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding common_peak2_36_19_0.609032646170079_4.6264444179724_0.932560489028298 chr12 76837841 76838176 + 0.932560489028298 NA intron (NM_145927, intron 1 of 11) intron (NM_145927, intron 1 of 11) 541 NM_145927 110606 Mm.151174 NM_145927 ENSMUSG00000033373 Fntb 2010013E13Rik|AA409500 farnesyltransferase, CAAX box, beta protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-9 chr19 47137306 47137597 + 0.932560489028298 NA intron (NM_133746, intron 1 of 2) intron (NM_133746, intron 1 of 2) 843 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-2 chr1 152386092 152386531 + 0.932560489028298 NA intron (NM_025677, intron 1 of 4) intron (NM_025677, intron 1 of 4) 371 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-4 chr16 89835002 89835617 + 0.932560489028298 NA intron (NM_009384, intron 14 of 27) intron (NM_009384, intron 14 of 27) -16957 NM_001145887 21844 Mm.310902 NM_009384 ENSMUSG00000002489 Tiam1 AI847750|D16Ium10|D16Ium10e T cell lymphoma invasion and metastasis 1 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-9 chr9 35267253 35267651 + 0.932560489028298 NA promoter-TSS (NM_028040) promoter-TSS (NM_028040) 353 NM_175411 109229 Mm.24197 NM_175411 ENSMUSG00000050471 Fam118b 2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l family with sequence similarity 118, member B protein-coding unique_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298 chr13 38350850 38351378 + 0.932560489028298 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 5398 NM_007556 12161 Mm.385759 NM_007556 ENSMUSG00000039004 Bmp6 D13Wsu115e|Vgr1 bone morphogenetic protein 6 protein-coding common_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-2 chr9 89704459 89704902 + 0.932560489028298 NA intron (NM_025360, intron 1 of 2) intron (NM_025360, intron 1 of 2) 363 NM_025360 66111 Mm.27606 NM_025360 ENSMUSG00000032353 Tmed3 1200002G13Rik|AW546672|P24b transmembrane p24 trafficking protein 3 protein-coding unique_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-3 chr15 36762368 36762694 + 0.932560489028298 NA Intergenic Intergenic 28401 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-10 chr5 137778996 137779264 + 0.932560489028298 NA exon (NM_001356989, exon 1 of 3) exon (NM_001356989, exon 1 of 3) 226 NM_027242 69871 Mm.276058 NM_027242 ENSMUSG00000029725 Ppp1r35 2010007H12Rik|2010011D20Rik|AL024004 protein phosphatase 1, regulatory subunit 35 protein-coding common_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298 chr5 150612058 150612410 + 0.932560489028298 NA intron (NM_001362416, intron 6 of 7) intron (NM_001362416, intron 6 of 7) -17709 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak2_37_19_0.647235359657785_4.64554577471625_0.932560489028298 chr11 86960065 86960420 + 0.932560489028298 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 33520 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-6 chr13 15985458 15985914 + 0.932560489028298 NA intron (NR_155430, intron 1 of 3) intron (NR_155430, intron 1 of 3) -26165 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-5 chr3 54756265 54756923 + 0.932560489028298 NA intron (NM_019483, intron 1 of 5) intron (NM_019483, intron 1 of 5) 1012 NM_019483 55994 Mm.244353 NM_019483 ENSMUSG00000027796 Smad9 MADH6|Madh8|Madh9|Smad8 SMAD family member 9 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298 chr1 138617090 138617637 + 0.932560489028298 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 2394 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-8 chr5 121835133 121835776 + 0.932560489028298 NA intron (NM_001306127, intron 1 of 8) intron (NM_001306127, intron 1 of 8) 650 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak2_37_19_0.647235359657785_4.64554577471625_0.932560489028298-4 chr7 19935643 19935950 + 0.932560489028298 NA Intergenic Intergenic -14653 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding unique_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-4 chr4 155215829 155216225 + 0.932560489028298 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 6508 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-5 chr12 100210569 100210921 + 0.932560489028298 NA TTS (NM_009790) TTS (NM_009790) 10601 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1 calmodulin 1 protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298 chr11 70563070 70563572 + 0.932560489028298 NA intron (NM_016713, intron 1 of 30) intron (NM_016713, intron 1 of 30) 440 NM_016713 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-6 chr3 70806853 70807428 + 0.932560489028298 NA intron (NR_040556, intron 1 of 3) intron (NR_040556, intron 1 of 3) 151 NR_040556 625901 Mm.366028 NR_040556 ENSMUSG00000097252 Gm6634 EG625901 predicted gene 6634 ncRNA unique_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-2 chr18 60900659 60901259 + 0.932560489028298 NA Intergenic Intergenic -11281 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-3 chr3 121713443 121713887 + 0.932560489028298 NA Intergenic Intergenic -9872 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-3 chr15 66541393 66541759 + 0.932560489028298 NA exon (NM_172514, exon 6 of 10) exon (NM_172514, exon 6 of 10) 19470 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-8 chr5 24100689 24101375 + 0.932560489028298 NA intron (NM_001161800, intron 1 of 9) CpG 442 NM_001161800 52323 Mm.273768 NM_026448 ENSMUSG00000028986 Klhl7 2700038B03Rik|D5Ertd363e|SBBI26 kelch-like 7 protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-3 chr11 106083745 106084075 + 0.932560489028298 NA promoter-TSS (NM_011947) promoter-TSS (NM_011947) -992 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-4 chr11 96991431 96991923 + 0.932560489028298 NA Intergenic Intergenic -13989 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-8 chr17 62883392 62883859 + 0.932560489028298 NA Intergenic Intergenic -2308 NM_010109 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-7 chr4 59547137 59547845 + 0.932560489028298 NA intron (NM_144904, intron 1 of 14) intron (NM_144904, intron 1 of 14) 1873 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding unique_peak2_22_31_-0.750091718630501_4.62495414068475_0.932560489028298-9 chr8 124926027 124926304 + 0.932560489028298 NA intron (NM_053207, intron 1 of 4) intron (NM_053207, intron 1 of 4) 23089 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_36_19_0.609032646170079_4.6264444179724_0.932560489028298-3 chr3 142882511 142882832 + 0.932560489028298 NA promoter-TSS (NM_178654) promoter-TSS (NM_178654) 176 NR_152127 320229 Mm.187582 NR_152127 9530052C20Rik - RIKEN cDNA 9530052C20 gene ncRNA common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-2 chr11 102697535 102698180 + 0.932560489028298 NA promoter-TSS (NM_025918) promoter-TSS (NM_025918) -132 NM_025918 52715 Mm.277638 NM_025918 ENSMUSG00000020925 Ccdc43 2610001E01Rik|D11Ertd707e coiled-coil domain containing 43 protein-coding unique_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-2 chr15 13208161 13209061 + 0.932560489028298 NA Intergenic Intergenic -34936 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-3 chr11 8585436 8586221 + 0.932560489028298 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 78707 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_36_19_0.609032646170079_4.6264444179724_0.932560489028298-4 chr3 144091921 144092261 + 0.932560489028298 NA Intergenic Intergenic 110241 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298-7 chr15 75921107 75921503 + 0.932560489028298 NA intron (NM_025412, intron 1 of 5) CpG 255 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding unique_peak1_36_19_0.609032646170079_4.6264444179724_0.932560489028298 chr16 24543879 24544483 + 0.932560489028298 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) 14867 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_37_19_0.647235359657785_4.64554577471625_0.932560489028298-5 chr11 103387504 103387887 + 0.932560489028298 NA intron (NM_183034, intron 4 of 11) intron (NM_183034, intron 4 of 11) -24003 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_36_19_0.609032646170079_4.6264444179724_0.932560489028298-2 chr14 57296908 57297181 + 0.932560489028298 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 101439 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_37_19_0.647235359657785_4.64554577471625_0.932560489028298-2 chr2 154743251 154743715 + 0.932560489028298 NA Intergenic Intergenic -47627 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_222_216_-0.257426559460263_7.63283795271435_0.93250844648553 chr8 120000826 120002921 + 0.93250844648553 NA intron (NM_001310635, intron 1 of 14) intron (NM_001310635, intron 1 of 14) 9435 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak1_56_65_-0.494395062585852_5.79719658806553_0.931938475733901-3 chr6 51470786 51471391 + 0.931938475733901 NA promoter-TSS (NM_001355002) promoter-TSS (NM_001355002) -164 NM_001355002 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding unique_peak1_78_47_0.43260516555412_5.80126508349822_0.931938475733901 chr6 47748658 47749342 + 0.931938475733901 NA Intergenic CpG 3925 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_78_47_0.43260516555412_5.80126508349822_0.931938475733901-5 chr9 108347930 108348750 + 0.931938475733901 NA intron (NM_011678, intron 1 of 21) intron (NM_011678, intron 1 of 21) 509 NM_011678 22258 Mm.3974 NM_011678 ENSMUSG00000032612 Usp4 F730026I20Rik|Unp|mKIAA4155 ubiquitin specific peptidase 4 (proto-oncogene) protein-coding common_peak1_78_47_0.43260516555412_5.80126508349822_0.931938475733901-4 chr8 119428691 119429140 + 0.931938475733901 NA Intergenic Intergenic -8247 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak1_56_65_-0.494395062585852_5.79719658806553_0.931938475733901 chr1 172376626 172377148 + 0.931938475733901 NA exon (NM_026234, exon 1 of 1) exon (NM_026234, exon 1 of 1) 356 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding common_peak1_78_47_0.43260516555412_5.80126508349822_0.931938475733901-3 chr7 13041507 13042302 + 0.931938475733901 NA TTS (NM_001290453) TTS (NM_001290453) -3629 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak2_56_65_-0.494395062585852_5.79719658806553_0.931938475733901-2 chr17 5189482 5190123 + 0.931938475733901 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 194728 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_56_65_-0.494395062585852_5.79719658806553_0.931938475733901 chr11 101063095 101064026 + 0.931938475733901 NA 3' UTR (NM_001243051, exon 21 of 21) 3' UTR (NM_001243051, exon 21 of 21) -6534 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_78_47_0.43260516555412_5.80126508349822_0.931938475733901-2 chr5 120502796 120503550 + 0.931938475733901 NA intron (NM_023625, intron 1 of 11) intron (NM_023625, intron 1 of 11) 450 NM_023625 71772 Mm.100065 NM_023625 ENSMUSG00000029598 Plbd2 1300012G16Rik|AU019810|P76 phospholipase B domain containing 2 protein-coding common_peak1_56_65_-0.494395062585852_5.79719658806553_0.931938475733901-2 chr11 16507495 16508128 + 0.931938475733901 NA intron (NM_011343, intron 1 of 3) intron (NM_011343, intron 1 of 3) 673 NM_011343 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak1_78_47_0.43260516555412_5.80126508349822_0.931938475733901 chr2 18027768 18028423 + 0.931938475733901 NA non-coding (NR_028376, exon 2 of 2) non-coding (NR_028376, exon 2 of 2) 846 NR_028378 100034739 Mm.401643 NR_028378 Gm17762 - predicted gene, 17762 ncRNA common_peak1_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-2 chr7 19458230 19458744 + 0.931423394592434 NA promoter-TSS (NM_172279) promoter-TSS (NM_172279) 7 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding unique_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-2 chr4 137756505 137757250 + 0.931423394592434 NA intron (NM_001287172, intron 2 of 11) intron (NM_001287172, intron 2 of 11) 9598 NM_001287172 11647 Mm.288186 NM_007431 ENSMUSG00000028766 Alpl ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434 chr15 96288392 96289042 + 0.931423394592434 NA intron (NM_175251, intron 2 of 20) intron (NM_175251, intron 2 of 20) 1195 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-5 chr2 30066506 30066889 + 0.931423394592434 NA 5' UTR (NM_001204875, exon 1 of 8) 5' UTR (NM_001204875, exon 1 of 8) 223 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak1_32_41_-0.625251438381002_5.07969170358826_0.931423394592434 chr18 36524701 36525071 + 0.931423394592434 NA Intergenic Intergenic -3266 NM_172830 240215 Mm.135463 NM_172830 ENSMUSG00000024485 Slc4a9 AE4|D630003B07|D630024F24Rik solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-2 chr12 59131522 59131986 + 0.931423394592434 NA intron (NM_001165253, intron 1 of 22) CpG 301 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-3 chr18 36524669 36525067 + 0.931423394592434 NA Intergenic Intergenic -3284 NM_172830 240215 Mm.135463 NM_172830 ENSMUSG00000024485 Slc4a9 AE4|D630003B07|D630024F24Rik solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-6 chr2 126033897 126034936 + 0.931423394592434 NA promoter-TSS (NM_008008) promoter-TSS (NM_008008) -242 NM_008008 14178 Mm.330557 NM_008008 ENSMUSG00000027208 Fgf7 Kgf fibroblast growth factor 7 protein-coding unique_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434 chr15 38926297 38926757 + 0.931423394592434 NA Intergenic Intergenic -7382 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-6 chr5 77406439 77406884 + 0.931423394592434 NA intron (NM_001159518, intron 1 of 5) intron (NM_001159518, intron 1 of 5) 1384 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-7 chr2 155979066 155979385 + 0.931423394592434 NA exon (NM_001129999, exon 19 of 33) exon (NM_001129999, exon 19 of 33) 22667 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-4 chr13 98815606 98816178 + 0.931423394592434 NA promoter-TSS (NM_172591) promoter-TSS (NM_172591) -443 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-4 chr2 173789599 173790359 + 0.931423394592434 NA Intergenic Intergenic 52408 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-9 chr4 84523373 84523664 + 0.931423394592434 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 151568 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-7 chr5 90880071 90881000 + 0.931423394592434 NA Intergenic Intergenic -10710 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-3 chr13 63045106 63045551 + 0.931423394592434 NA intron (NM_001289926, intron 3 of 15) intron (NM_001289926, intron 3 of 15) 80435 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-10 chr6 81731140 81731636 + 0.931423394592434 NA Intergenic Intergenic 164275 NR_106091 102465711 NR_106091 ENSMUSG00000106154 Mir7232 mmu-mir-7232 microRNA 7232 ncRNA common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434 chr11 116580728 116581289 + 0.931423394592434 NA intron (NM_173755, intron 1 of 17) CpG 439 NM_173755 217342 Mm.243950 NM_173755 ENSMUSG00000020802 Ube2o 9630022H21|B230113M03Rik|E2-230K|mKIAA1734 ubiquitin-conjugating enzyme E2O protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-2 chr17 42579878 42580647 + 0.931423394592434 NA intron (NM_181753, intron 5 of 6) intron (NM_181753, intron 5 of 6) 31051 NM_181753 353344 Mm.184937 NM_181753 ENSMUSG00000043972 Opn5 Gpr136|Neuropsin|PGR12|TMEM13 opsin 5 protein-coding common_peak2_32_41_-0.625251438381002_5.07969170358826_0.931423394592434-5 chr3 14610910 14611267 + 0.931423394592434 NA exon (NM_001347206, exon 1 of 4) exon (NM_001347206, exon 1 of 4) 133 NM_001347206 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-11 chr6 92380601 92381036 + 0.931423394592434 NA intron (NM_001134461, intron 7 of 7) intron (NM_001134461, intron 7 of 7) 100574 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak1_49_27_0.554943940094705_5.08482689210496_0.931423394592434-8 chr4 45011770 45012126 + 0.931423394592434 NA 5' UTR (NM_001163284, exon 1 of 2) 5' UTR (NM_001163284, exon 1 of 2) 464 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding unique_peak2_1_4_-1.57072311194983_1.53656653891245_0.931118710592187-3 chr19 24667486 24667688 + 0.931118710592187 NA Intergenic MTD|LTR|ERVL-MaLR -6421 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_4_2_0.478844401397006_1.82438470141966_0.931118710592187-4 chr7 84346172 84346402 + 0.931118710592187 NA intron (NM_007488, intron 4 of 18) intron (NM_007488, intron 4 of 18) 63751 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak2_1_4_-1.57072311194983_1.53656653891245_0.931118710592187-2 chr18 60715147 60715352 + 0.931118710592187 NA intron (NM_001348146, intron 1 of 6) B3|SINE|B2 12317 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_4_2_0.478844401397006_1.82438470141966_0.931118710592187-2 chr19 10145636 10145845 + 0.931118710592187 NA Intergenic ORR1F|LTR|ERVL-MaLR -37148 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding unique_peak2_1_4_-1.57072311194983_1.53656653891245_0.931118710592187 chr11 63028874 63029081 + 0.931118710592187 NA Intergenic Intergenic -24843 NR_126547 74884 Mm.363520 NR_126547 ENSMUSG00000087604 Cdrt4os1 4930452L02Rik CMT1A duplicated region transcript 4, opposite strand 1 ncRNA unique_peak1_4_2_0.478844401397006_1.82438470141966_0.931118710592187-3 chr6 6962934 6963124 + 0.931118710592187 NA intron (NM_001077713, intron 1 of 1) intron (NM_001077713, intron 1 of 1) 7011 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding unique_peak1_4_2_0.478844401397006_1.82438470141966_0.931118710592187 chr12 10040299 10040512 + 0.931118710592187 NA Intergenic Intergenic -329566 NM_027588 70881 Mm.272843 NM_027588 ENSMUSG00000020622 Nt5c1b 4921514H13Rik|AIRP|CN-IB|cN1B 5'-nucleotidase, cytosolic IB protein-coding unique_peak2_1_4_-1.57072311194983_1.53656653891245_0.931118710592187-4 chr5 13811306 13811510 + 0.931118710592187 NA Intergenic Intergenic 19789 NM_027650 71026 Mm.158536 NM_027650 ENSMUSG00000067855 Speer3 4933405P08Rik|SPEER-3 spermatogenesis associated glutamate (E)-rich protein 3 protein-coding common_peak1_87_53_0.417232920860347_5.96350396259364_0.930588659547694 chr1 130716151 130716808 + 0.930588659547694 NA promoter-TSS (NR_027859) promoter-TSS (NR_027859) -658 NR_027859 18640 Mm.249861 NM_008825 ENSMUSG00000026409 Pfkfb2 4930568D07Rik 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 protein-coding common_peak1_64_72_-0.45168446524427_5.96398232625788_0.930588659547694 chr8 125344236 125344863 + 0.930588659547694 NA Intergenic Intergenic 148284 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak1_63_72_-0.47389447380871_5.95287732197566_0.930588659547694-2 chr9 110132019 110132679 + 0.930588659547694 NA intron (NM_009211, intron 1 of 27) CpG 325 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak2_64_72_-0.45168446524427_5.96398232625788_0.930588659547694 chr19 12005131 12005924 + 0.930588659547694 NA Intergenic Intergenic 31213 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_87_53_0.417232920860347_5.96350396259364_0.930588659547694 chr2 113449321 113450636 + 0.930588659547694 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 8914 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_63_72_-0.47389447380871_5.95287732197566_0.930588659547694 chr10 82814442 82815230 + 0.930588659547694 NA intron (NR_038042, intron 1 of 2) intron (NR_038042, intron 1 of 2) 2713 NR_038042 70003 Mm.48789 NR_038042 ENSMUSG00000056821 1700028I16Rik - RIKEN cDNA 1700028I16 gene ncRNA common_peak2_236_161_0.251498286044862_7.46559914590706_0.930020383212578 chr5 139907856 139909621 + 0.930020383212578 NA intron (NM_175522, intron 1 of 1) CpG 795 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_160_160_-0.293459506317477_7.18418712495588_0.929635894836409 chr15 59646442 59648466 + 0.929635894836409 NA Intergenic Intergenic -1200 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_160_160_-0.293459506317477_7.18418712495588_0.929635894836409 chr17 32283664 32285173 + 0.929635894836409 NA promoter-TSS (NM_198094) promoter-TSS (NM_198094) -285 NM_020508 57261 Mm.253518 NM_020508 ENSMUSG00000024002 Brd4 Brd5|HUNK1|MCAP|WI-11513 bromodomain containing 4 protein-coding common_peak2_80_87_-0.406049165509684_6.25640703588246_0.928905140743612 chr15 99849156 99850769 + 0.928905140743612 NA intron (NM_001113545, intron 1 of 10) B1_Mm|SINE|Alu 25494 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_80_87_-0.406049165509684_6.25640703588246_0.928905140743612 chr10 27988473 27989290 + 0.928905140743612 NA Intergenic Intergenic -85939 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_115_73_0.358404676175072_6.38865570371649_0.92842122850166-2 chr11 100396874 100397683 + 0.92842122850166 NA promoter-TSS (NR_132425) promoter-TSS (NR_132425) 512 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak2_88_95_-0.396655274321229_6.38663486356054_0.92842122850166 chr11 29172896 29173524 + 0.92842122850166 NA 5' UTR (NM_134034, exon 1 of 16) 5' UTR (NM_134034, exon 1 of 16) 303 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding common_peak2_88_95_-0.396655274321229_6.38663486356054_0.92842122850166-2 chr11 88560988 88562141 + 0.92842122850166 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -57687 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_115_73_0.358404676175072_6.38865570371649_0.92842122850166 chr10 125966298 125967359 + 0.92842122850166 NA intron (NM_177152, intron 1 of 18) CpG 609 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933 chr11 103050598 103051038 + 0.92816130897933 NA intron (NM_008707, intron 3 of 11) intron (NM_008707, intron 3 of 11) 22275 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak2_27_36_-0.677754271837025_4.87057622971044_0.92816130897933-2 chr13 99516029 99516374 + 0.92816130897933 NA intron (NM_008634, intron 1 of 6) CpG 401 NM_008634 17755 Mm.4173 NM_008634 ENSMUSG00000052727 Map1b A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5 microtubule-associated protein 1B protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-4 chr5 135632796 135633371 + 0.92816130897933 NA intron (NM_146002, intron 1 of 3) intron (NM_146002, intron 1 of 3) 429 NM_146002 215160 Mm.295438 NM_031398 ENSMUSG00000039917 Rhbdd2 0610011L13Rik|AI480532|Rhbdl7|Usmg1 rhomboid domain containing 2 protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933-7 chr9 103033875 103034293 + 0.92816130897933 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 25595 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak2_27_36_-0.677754271837025_4.87057622971044_0.92816130897933 chr19 59860619 59861238 + 0.92816130897933 NA Intergenic Intergenic 82436 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_27_36_-0.677754271837025_4.87057622971044_0.92816130897933-2 chr12 85201380 85201907 + 0.92816130897933 NA Intergenic Intergenic -17838 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933-3 chr11 78535804 78536107 + 0.92816130897933 NA promoter-TSS (NM_018854) promoter-TSS (NM_018854) 305 NM_001159392 21927 Mm.386774 NM_009395 ENSMUSG00000017615 Tnfaip1 Bacurd2|Edp-1|Edp1|Tnfip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-8 chr9 120013927 120014622 + 0.92816130897933 NA 3' UTR (NM_011724, exon 3 of 3) 3' UTR (NM_011724, exon 3 of 3) 9324 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-5 chr6 28421141 28421544 + 0.92816130897933 NA 5' UTR (NM_028900, exon 1 of 2) 5' UTR (NM_028900, exon 1 of 2) 382 NM_028900 74375 Mm.332950 NM_028900 ENSMUSG00000029708 Gcc1 4932417P04Rik golgi coiled coil 1 protein-coding common_peak2_27_36_-0.677754271837025_4.87057622971044_0.92816130897933-4 chr7 116262513 116263151 + 0.92816130897933 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -25056 NM_001305186 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933 chr1 171345035 171345520 + 0.92816130897933 NA promoter-TSS (NM_001360824) promoter-TSS (NM_001360824) 323 NM_001360825 18637 Mm.10756 NM_011070 ENSMUSG00000006412 Pfdn2 ESTM27|W48336 prefoldin 2 protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933-5 chr3 142620662 142620973 + 0.92816130897933 NA intron (NM_010260, intron 1 of 10) intron (NM_010260, intron 1 of 10) 154 NM_010260 14469 Mm.24038 NM_010260 ENSMUSG00000028270 Gbp2 - guanylate binding protein 2 protein-coding unique_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933 chr1 135655918 135656638 + 0.92816130897933 NA Intergenic Intergenic 58502 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-3 chr2 167584913 167585732 + 0.92816130897933 NA Intergenic Intergenic 46683 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933-6 chr7 25718506 25718943 + 0.92816130897933 NA intron (NM_028771, intron 1 of 4) intron (NM_028771, intron 1 of 4) 329 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak2_27_36_-0.677754271837025_4.87057622971044_0.92816130897933 chr1 46066839 46067268 + 0.92816130897933 NA intron (NM_001160386, intron 2 of 65) intron (NM_001160386, intron 2 of 65) 315 NM_001160386 227058 Mm.296880 NM_001160386 ENSMUSG00000041144 Dnah7b Dnahc7b|Gm107 dynein, axonemal, heavy chain 7B protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-2 chr14 61599544 61599930 + 0.92816130897933 NA intron (NM_023233, intron 1 of 2) intron (NM_023233, intron 1 of 2) 225 NM_023233 66597 Mm.491258 NM_023233 ENSMUSG00000035235 Trim13 3110001L12Rik|CAR|LEU5|RNF77|Rfp2 tripartite motif-containing 13 protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-7 chr8 122610946 122611373 + 0.92816130897933 NA promoter-TSS (NM_021502) promoter-TSS (NM_021502) 328 NM_001193645 50917 Mm.1786 NM_016722 ENSMUSG00000015027 Galns mFLJ00319 galactosamine (N-acetyl)-6-sulfate sulfatase protein-coding common_peak2_27_36_-0.677754271837025_4.87057622971044_0.92816130897933-3 chr16 43464837 43465416 + 0.92816130897933 NA intron (NM_181058, intron 3 of 6) intron (NM_181058, intron 3 of 6) -44930 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak1_27_36_-0.677754271837025_4.87057622971044_0.92816130897933 chr10 14705153 14705499 + 0.92816130897933 NA promoter-TSS (NR_045824) promoter-TSS (NR_045824) 163 NM_025418 66201 Mm.227983 NM_025418 ENSMUSG00000019868 Vta1 1110001D18Rik|1110059P08Rik|AU040813|C85340|LIP5|SBP1 vesicle (multivesicular body) trafficking 1 protein-coding unique_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-2 chr5 39639879 39640501 + 0.92816130897933 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 4441 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933-4 chr11 108268392 108268800 + 0.92816130897933 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 75292 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_43_23_0.594212901875904_4.88206895165911_0.92816130897933-2 chr10 62577920 62578348 + 0.92816130897933 NA exon (NM_028197, exon 1 of 7) exon (NM_028197, exon 1 of 7) 323 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding unique_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-3 chr7 89663652 89664349 + 0.92816130897933 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 31182 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_43_23_0.594212901875904_4.88206895165911_0.92816130897933-6 chr7 127708329 127708702 + 0.92816130897933 NA promoter-TSS (NR_030428) promoter-TSS (NR_030428) 28 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak1_171_113_0.299242556898203_6.98251129261384_0.927916149749025 chr13 70729392 70731287 + 0.927916149749025 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -92705 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_117_121_-0.338391231813452_6.76154172165616_0.927844989706006 chr3 21952414 21953734 + 0.927844989706006 NA Intergenic Intergenic -123578 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_116_121_-0.350582938226109_6.75544586844983_0.927844989706006 chr15 97832538 97833448 + 0.927844989706006 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -1226 NM_001204276 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_117_121_-0.338391231813452_6.76154172165616_0.927844989706006 chr11 3265696 3266864 + 0.927844989706006 NA exon (NM_007879, exon 1 of 9) exon (NM_007879, exon 1 of 9) 183 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|DRG-1|NEDD-3|Nedd3 developmentally regulated GTP binding protein 1 protein-coding common_peak1_71_42_0.458391514397363_5.65546051190078_0.925339689277516-4 chr19 41980381 41981113 + 0.925339689277516 NA intron (NM_028152, intron 1 of 30) MIRc|SINE|MIR 389 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-6 chr7 27165987 27166676 + 0.925339689277516 NA promoter-TSS (NM_001357767) promoter-TSS (NM_001357767) 471 NM_053208 112406 Mm.29978 NM_053208 ENSMUSG00000058709 Egln2 0610011A13Rik|C85656|Hif-p4h-1|Ier4|Phd1|SM-20 egl-9 family hypoxia-inducible factor 2 protein-coding common_peak1_50_59_-0.516224136044612_5.64877852758621_0.925339689277516 chr5 65763123 65763705 + 0.925339689277516 NA promoter-TSS (NM_001024917) promoter-TSS (NM_001024917) -107 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding common_peak1_71_42_0.458391514397363_5.65546051190078_0.925339689277516-5 chr4 59549568 59550270 + 0.925339689277516 NA promoter-TSS (NM_178164) promoter-TSS (NM_178164) -555 NM_144904 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_71_42_0.458391514397363_5.65546051190078_0.925339689277516-2 chr15 79833238 79834142 + 0.925339689277516 NA intron (NM_001013360, intron 3 of 7) intron (NM_001013360, intron 3 of 7) 643 NM_001013360 504193 Mm.38438 NM_029079 ENSMUSG00000089837 Npcd Cbx6-Nptxr neuronal pentraxin chromo domain protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-5 chr7 25688576 25689457 + 0.925339689277516 NA intron (NM_011577, intron 1 of 6) intron (NM_011577, intron 1 of 6) 2014 NM_011577 21803 Mm.248380 NM_011577 ENSMUSG00000002603 Tgfb1 TGF-beta1|TGFbeta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-7 chr8 105606590 105607117 + 0.925339689277516 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 1624 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-4 chr19 8888501 8889196 + 0.925339689277516 NA promoter-TSS (NM_025463) promoter-TSS (NM_025463) -35 NM_025463 66276 Mm.27503 NM_025463 ENSMUSG00000071653 1810009A15Rik - RIKEN cDNA 1810009A15 gene protein-coding common_peak1_71_42_0.458391514397363_5.65546051190078_0.925339689277516-3 chr19 3839548 3840748 + 0.925339689277516 NA Intergenic Intergenic -11625 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-2 chr9 73039459 73040103 + 0.925339689277516 NA promoter-TSS (NM_018889) promoter-TSS (NM_018889) 63 NM_001308425 66364 Mm.392089 NM_001308425 2310009A05Rik 5031420N21Rik RIKEN cDNA 2310009A05 gene protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-3 chr15 97836089 97836689 + 0.925339689277516 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -4622 NM_001204276 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516 chr1 72428417 72429124 + 0.925339689277516 NA exon (NM_001045533, exon 4 of 4) exon (NM_001045533, exon 4 of 4) 107794 NM_001045533 381270 Mm.337023 NM_001045533 ENSMUSG00000039372 March4 BC056494|mKIAA1399 membrane-associated ring finger (C3HC4) 4 protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-2 chr10 24397537 24398523 + 0.925339689277516 NA Intergenic Intergenic 174513 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_50_59_-0.516224136044612_5.64877852758621_0.925339689277516-8 chr9 72661655 72662155 + 0.925339689277516 NA promoter-TSS (NM_010890) promoter-TSS (NM_010890) -426 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_71_42_0.458391514397363_5.65546051190078_0.925339689277516 chr12 108308534 108309372 + 0.925339689277516 NA intron (NM_001044380, intron 1 of 8) intron (NM_001044380, intron 1 of 8) 2683 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak1_71_42_0.458391514397363_5.65546051190078_0.925339689277516-6 chr9 119982430 119983091 + 0.925339689277516 NA 5' UTR (NM_001357560, exon 1 of 5) 5' UTR (NM_001357560, exon 1 of 5) 263 NM_001357560 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_161_161_-0.293522529330255_7.1930887382195_0.925330921756311-2 chr17 32283641 32285079 + 0.925330921756311 NA promoter-TSS (NM_198094) promoter-TSS (NM_198094) -227 NM_020508 57261 Mm.253518 NM_020508 ENSMUSG00000024002 Brd4 Brd5|HUNK1|MCAP|WI-11513 bromodomain containing 4 protein-coding common_peak2_161_161_-0.293522529330255_7.1930887382195_0.925330921756311 chr11 95086026 95087446 + 0.925330921756311 NA Intergenic Intergenic -9925 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_186_183_-0.271650719914541_7.38773659609974_0.924842974028611 chr15 63997003 63998895 + 0.924842974028611 NA 5' UTR (NM_001360035, exon 1 of 12) 5' UTR (NM_001360035, exon 1 of 12) 117 NM_001360035 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_186_183_-0.271650719914541_7.38773659609974_0.924842974028611 chr14 25377156 25379561 + 0.924842974028611 NA Intergenic CpG -80827 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_224_152_0.259527244341322_7.38715146486331_0.924842974028562 chr19 9982730 9984281 + 0.924842974028562 NA intron (NR_073181, intron 2 of 4) intron (NR_073181, intron 2 of 4) 859 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_210_142_0.265015617380247_7.29237914546851_0.924376909657022 chr16 4639916 4641620 + 0.924376909657022 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 823 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding common_peak1_128_131_-0.32437096649481_6.88220863611105_0.924292404666925 chr7 106235015 106236518 + 0.924292404666925 NA Intergenic Intergenic -20426 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak2_159_105_0.300611549688743_6.87822622940757_0.924292404666901 chr8 60632877 60633821 + 0.924292404666901 NA intron (NM_001293769, intron 1 of 1) CpG 524 NM_001293769 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_97_60_0.395565826229924_6.12852025067785_0.923578376042127 chr10 78425712 78426419 + 0.923578376042127 NA intron (NM_007793, intron 1 of 2) intron (NM_007793, intron 1 of 2) 395 NM_007793 13014 Mm.6095 NM_007793 ENSMUSG00000005054 Cstb AA960480|Stfb cystatin B protein-coding common_peak2_72_80_-0.435434567318698_6.12213271922528_0.923578376042115-2 chr10 71155540 71156390 + 0.923578376042115 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 3725 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_72_80_-0.435434567318698_6.12213271922528_0.923578376042115 chr10 71119925 71121076 + 0.923578376042115 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 39190 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_72_80_-0.435434567318698_6.12213271922528_0.923578376042115-3 chr8 36828200 36829503 + 0.923578376042115 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -95797 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_72_80_-0.435434567318698_6.12213271922528_0.923578376042115 chr2 153632164 153633024 + 0.923578376042115 NA exon (NM_133850, exon 1 of 9) exon (NM_133850, exon 1 of 9) 187 NM_001195390 99311 Mm.294478 NM_133850 ENSMUSG00000056941 Commd7 2310010I22Rik|AW060956|mU3 COMM domain containing 7 protein-coding common_peak2_98_104_-0.373398910614154_6.52754606235905_0.923563255186779 chr13 5843846 5845077 + 0.923563255186779 NA Intergenic Intergenic 13631 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-2 chrX 73787106 73787959 + 0.923258070389341 NA promoter-TSS (NM_008323) promoter-TSS (NM_008323) 509 NM_009279 20832 Mm.831 NM_009279 ENSMUSG00000002014 Ssr4 AW743063|C78062|SSR-delta|TRAP-delta|Trap signal sequence receptor, delta protein-coding common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-3 chr3 38043024 38043689 + 0.923258070389341 NA Intergenic Intergenic 144543 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-2 chr15 85655602 85656093 + 0.923258070389341 NA Intergenic Intergenic -47926 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_38_47_-0.578588724038587_5.29566813870186_0.923258070389341 chr4 126262353 126262774 + 0.923258070389341 NA intron (NM_013718, intron 1 of 4) CpG 158 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-7 chr9 14784704 14785219 + 0.923258070389341 NA promoter-TSS (NM_001348260) promoter-TSS (NM_001348260) 307 NM_018736 17535 Mm.149071 NM_018736 ENSMUSG00000031928 Mre11a Mre11|Mre11b MRE11A homolog A, double strand break repair nuclease protein-coding common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341 chr13 64002443 64003278 + 0.923258070389341 NA Intergenic Intergenic 86341 NM_008291 15487 Mm.5109 NM_008291 ENSMUSG00000033122 Hsd17b3 - hydroxysteroid (17-beta) dehydrogenase 3 protein-coding common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-6 chr8 31301741 31302265 + 0.923258070389341 NA Intergenic Intergenic -65746 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-4 chr4 62519389 62519873 + 0.923258070389341 NA intron (NM_008525, intron 1 of 11) CpG 278 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding unique_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341 chr8 24400135 24401228 + 0.923258070389341 NA Intergenic Intergenic 38265 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_38_47_-0.578588724038587_5.29566813870186_0.923258070389341-5 chr4 126262342 126262869 + 0.923258070389341 NA intron (NM_013718, intron 1 of 4) intron (NM_013718, intron 1 of 4) 200 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-6 chr13 74617463 74618295 + 0.923258070389335 NA Intergenic Intergenic -21974 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-2 chr1 149960676 149961322 + 0.923258070389335 NA intron (NM_008869, intron 1 of 17) intron (NM_008869, intron 1 of 17) 291 NM_008869 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-5 chr11 88513718 88514876 + 0.923258070389335 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -104954 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-7 chr9 78022512 78023278 + 0.923258070389335 NA Intergenic B2_Mm1t|SINE|B2 -29063 NM_008103 14531 Mm.1400 NM_008103 ENSMUSG00000023333 Gcm1 GCMa|Gcm-rs2|Gcm1-rs1|glide glial cells missing homolog 1 protein-coding common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-4 chr10 115384048 115384673 + 0.923258070389335 NA promoter-TSS (NM_001033261) promoter-TSS (NM_001033261) 75 NM_025780 66816 Mm.32314 NM_025780 ENSMUSG00000020137 Thap2 2900040O07Rik|9030625G08Rik|AI450385|AI649097 THAP domain containing, apoptosis associated protein 2 protein-coding unique_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-2 chr8 60993293 60993922 + 0.923258070389335 NA 5' UTR (NM_001293637, exon 1 of 35) 5' UTR (NM_001293637, exon 1 of 35) 414 NM_175089 18004 Mm.486881 NM_175089 ENSMUSG00000031644 Nek1 D8Ertd790e|kat NIMA (never in mitosis gene a)-related expressed kinase 1 protein-coding unique_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335 chr5 30888786 30889362 + 0.923258070389335 NA promoter-TSS (NM_001294262) promoter-TSS (NM_001294262) 68 NM_001048192 231093 Mm.440364 NM_174849 ENSMUSG00000029165 Agbl5 9430057O19Rik|CCP5 ATP/GTP binding protein-like 5 protein-coding common_peak2_56_32_0.505604937414148_5.29719658806553_0.923258070389335-2 chr11 104624825 104625562 + 0.923258070389335 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 17193 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak2_56_32_0.505604937414148_5.29719658806553_0.923258070389335 chr11 85140374 85140773 + 0.923258070389335 NA promoter-TSS (NM_001029934) promoter-TSS (NM_001029934) -618 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335 chr1 75141296 75141984 + 0.923258070389335 NA promoter-TSS (NM_001356264) promoter-TSS (NM_001356264) 51 NM_001356264 69171 Mm.28193 NM_026977 ENSMUSG00000033159 Cnppd1 1810031K17Rik|AU043960 cyclin Pas1/PHO80 domain containing 1 protein-coding common_peak1_56_32_0.505604937414148_5.29719658806553_0.923258070389335-3 chr1 189786451 189787520 + 0.923258070389335 NA intron (NM_008976, intron 2 of 18) intron (NM_008976, intron 2 of 18) 58717 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak2_138_141_-0.322770068121596_6.98836208544388_0.92298081608711 chr11 52231567 52232912 + 0.92298081608711 NA intron (NM_011543, intron 1 of 5) CpG 244 NM_011543 21402 Mm.42944 NM_011543 ENSMUSG00000036309 Skp1a 15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1 S-phase kinase-associated protein 1A protein-coding common_peak1_149_97_0.32136964069131_6.77539466446086_0.922095462234909 chr19 28989817 28991261 + 0.922095462234909 NA exon (NM_001302443, exon 1 of 7) exon (NM_001302443, exon 1 of 7) 187 NM_025950 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding common_peak2_118_122_-0.338079578001902_6.77347471633829_0.922095462234909 chr16 16598738 16600541 + 0.922095462234909 NA intron (NM_001301817, intron 1 of 16) intron (NM_001301817, intron 1 of 16) 339 NM_001301817 224014 Mm.256131 NM_139232 ENSMUSG00000022788 Fgd4 9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding common_peak1_64_37_0.490212580192162_5.49303380353967_0.921988635203701-2 chr4 59453443 59454122 + 0.921988635203701 NA Intergenic Intergenic -15149 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_64_37_0.490212580192162_5.49303380353967_0.921988635203701-4 chr7 105735781 105736392 + 0.921988635203701 NA promoter-TSS (NM_010562) promoter-TSS (NM_010562) 498 NM_025897 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak2_63_37_0.468002571627722_5.48192879925745_0.921988635203701 chr6 52228673 52229216 + 0.921988635203701 NA Intergenic Intergenic 1221 NR_029912 723820 NR_029912 ENSMUSG00000065443 Mir196b Mirn196b|mir-196b microRNA 196b ncRNA common_peak1_63_37_0.468002571627722_5.48192879925745_0.921988635203701-2 chr12 100280825 100281796 + 0.921988635203701 NA intron (NR_045741, intron 1 of 3) intron (NR_045741, intron 1 of 3) 4701 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA common_peak1_64_37_0.490212580192162_5.49303380353967_0.921988635203701 chr14 76414955 76415700 + 0.921988635203701 NA promoter-TSS (NM_207652) promoter-TSS (NM_207652) 366 NM_001310646 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_64_37_0.490212580192162_5.49303380353967_0.921988635203701-3 chr7 44304453 44305176 + 0.921988635203701 NA exon (NM_009131, exon 4 of 4) exon (NM_009131, exon 4 of 4) 2145 NM_009131 20256 Mm.20428 NM_009131 ENSMUSG00000004473 Clec11a AW457320|Clecsf3|Scgf C-type lectin domain family 11, member a protein-coding common_peak1_63_37_0.468002571627722_5.48192879925745_0.921988635203701-3 chr19 16372046 16372916 + 0.921988635203701 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -57477 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_63_37_0.468002571627722_5.48192879925745_0.921988635203701 chr10 67672644 67673216 + 0.921988635203701 NA Intergenic Intergenic -100971 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak1_64_37_0.490212580192162_5.49303380353967_0.921988635203701-5 chr8 25093922 25094490 + 0.921988635203701 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 7605 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_44_53_-0.543519354736884_5.48312782479503_0.921988635203689 chr10 77201356 77201859 + 0.921988635203689 NA Intergenic Intergenic -35077 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_44_53_-0.543519354736884_5.48312782479503_0.921988635203689-2 chr3 87919518 87920137 + 0.921988635203689 NA intron (NM_026591, intron 1 of 5) intron (NM_026591, intron 1 of 5) 283 NM_026591 67707 Mm.393802 NM_026591 ENSMUSG00000019710 Mrpl24 2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670 mitochondrial ribosomal protein L24 protein-coding common_peak2_44_53_-0.543519354736884_5.48312782479503_0.921988635203689 chr11 120098908 120099415 + 0.921988635203689 NA promoter-TSS (NM_183137) promoter-TSS (NM_183137) 227 NM_001110242 208501 Mm.46699 NM_001110242 ENSMUSG00000078572 Ndufaf8 1810043H04Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 8 protein-coding common_peak2_44_53_-0.543519354736884_5.48312782479503_0.921988635203689-3 chr7 110779577 110780414 + 0.921988635203689 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 7391 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_137_89_0.32478082812079_6.65424351039007_0.921687196593774 chr8 36822784 36823756 + 0.921687196593774 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -90216 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_225_153_0.256481181392106_7.39502713139095_0.9211302896319-2 chr15 83140457 83143005 + 0.9211302896319 NA intron (NM_001347082, intron 1 of 7) intron (NM_001347082, intron 1 of 7) 7647 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak1_225_153_0.256481181392106_7.39502713139095_0.9211302896319 chr1 134405531 134407837 + 0.9211302896319 NA intron (NR_149307, intron 3 of 8) intron (NR_149307, intron 3 of 8) 903 NR_149307 72017 Mm.280230 NM_028057 ENSMUSG00000026456 Cyb5r1 1500005G05Rik|B5R.1|C80155|Nqo3a2 cytochrome b5 reductase 1 protein-coding common_peak1_116_74_0.351335708840898_6.40448654491633_0.920998256124998-2 chrX 19165087 19167134 + 0.920998256124998 NA Intergenic Intergenic -19139 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak2_116_74_0.351335708840898_6.40448654491633_0.920998256124998 chr13 52979954 52981044 + 0.920998256124998 NA intron (NM_017373, intron 1 of 1) CpG 540 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_116_74_0.351335708840898_6.40448654491633_0.920998256124998 chr5 145280422 145281344 + 0.920998256124998 NA Intergenic Intergenic -2460 NM_001081431 666311 Mm.260773 NM_001081431 ENSMUSG00000070420 Zscan25 EG666311|Zfp498 zinc finger and SCAN domain containing 25 protein-coding common_peak2_57_66_-0.491176169080505_5.82050110591752_0.920775588791488 chr10 29312752 29313451 + 0.920775588791488 NA promoter-TSS (NM_025855) promoter-TSS (NM_025855) -65 NM_001110195 52665 Mm.28930 NM_025855 ENSMUSG00000019883 Echdc1 1700028A24Rik|AI314462|AI930038|D10Ertd667e|MMCD enoyl Coenzyme A hydratase domain containing 1 protein-coding common_peak1_80_48_0.438672609012405_5.83404614862141_0.920775588791488 chr19 43939415 43940207 + 0.920775588791488 NA intron (NM_028029, intron 1 of 15) intron (NM_028029, intron 1 of 15) 387 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak1_57_66_-0.491176169080505_5.82050110591752_0.920775588791488 chr15 80948268 80948894 + 0.920775588791488 NA promoter-TSS (NM_009634) promoter-TSS (NM_009634) 91 NM_009634 11564 Mm.38151 NM_009634 ENSMUSG00000022407 Adsl Adl|Asl adenylosuccinate lyase protein-coding unique_peak1_79_48_0.420877139709978_5.8251484139702_0.920775588791488 chr15 98541241 98542329 + 0.920775588791488 NA Intergenic Intergenic -7516 NR_153345 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak1_79_48_0.420877139709978_5.8251484139702_0.920775588791488-2 chr9 43743730 43744774 + 0.920775588791488 NA promoter-TSS (NM_021424) promoter-TSS (NM_021424) -324 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding common_peak2_57_66_-0.491176169080505_5.82050110591752_0.920775588791488-2 chr3 144679405 144679957 + 0.920775588791488 NA Intergenic Intergenic 40654 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_79_48_0.420877139709978_5.8251484139702_0.920775588791488 chr15 89169778 89170761 + 0.920775588791488 NA intron (NM_001159521, intron 3 of 37) intron (NM_001159521, intron 3 of 37) 3682 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_80_48_0.438672609012405_5.83404614862141_0.920775588791488-2 chr19 57197691 57198445 + 0.920775588791488 NA promoter-TSS (NM_001290816) promoter-TSS (NM_001290816) -437 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_57_66_-0.491176169080505_5.82050110591752_0.920775588791488-3 chr4 46389228 46389792 + 0.920775588791488 NA promoter-TSS (NM_029086) promoter-TSS (NM_029086) -73 NM_001347095 74753 Mm.45973 NM_029086 ENSMUSG00000028331 Trmo 5830415F09Rik|AV014846|Nap1 tRNA methyltransferase O protein-coding common_peak2_79_48_0.420877139709978_5.8251484139702_0.920775588791488-2 chr18 68139423 68140106 + 0.920775588791488 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -88182 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_79_48_0.420877139709978_5.8251484139702_0.920775588791488 chr8 14089839 14090344 + 0.920775588791488 NA intron (NM_001034862, intron 1 of 5) intron (NM_001034862, intron 1 of 5) 236 NM_001034862 234086 Mm.268896 NM_001034862 ENSMUSG00000051978 Erich1 - glutamate rich 1 protein-coding unique_peak2_57_66_-0.491176169080505_5.82050110591752_0.920775588791488 chr9 75070784 75071805 + 0.920775588791488 NA promoter-TSS (NM_010864) promoter-TSS (NM_010864) 88 NM_010864 17918 Mm.3645 NM_010864 ENSMUSG00000034593 Myo5a 9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr myosin VA protein-coding common_peak2_81_88_-0.40477386336596_6.27334649928342_0.920753037356072-2 chr2 94437464 94438183 + 0.920753037356072 NA intron (NM_007466, intron 1 of 13) CpG 363 NM_007466 11800 Mm.181824 NM_007466 ENSMUSG00000027193 Api5 AAC-11|AI196452|API-5 apoptosis inhibitor 5 protein-coding common_peak1_107_67_0.378029030076576_6.27647735628863_0.920753037356072 chr12 112692779 112693918 + 0.920753037356072 NA Intergenic Intergenic 14508 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak1_106_67_0.364703195778819_6.26981443913975_0.920753037356072 chr8 106010602 106011927 + 0.920753037356072 NA promoter-TSS (NM_025518) promoter-TSS (NM_025518) -214 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding common_peak2_81_88_-0.40477386336596_6.27334649928342_0.920753037356072 chr15 53687613 53688597 + 0.920753037356072 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -73826 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_107_67_0.378029030076576_6.27647735628863_0.920753037356072 chr3 57574926 57575612 + 0.920753037356072 NA intron (NM_001168281, intron 1 of 6) CpG 607 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_107_67_0.378029030076576_6.27647735628863_0.920753037356072-2 chrX 142965473 142966633 + 0.920753037356072 NA intron (NM_019496, intron 1 of 5) CpG 675 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_65_73_-0.449442360804436_5.98473218522673_0.920598702816666 chr2 57123323 57124010 + 0.920598702816666 NA intron (NM_001139509, intron 1 of 7) CpG 337 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_88_54_0.406947512875267_5.98483346996229_0.920598702816666 chr13 107329311 107330027 + 0.920598702816666 NA Intergenic Intergenic -140153 NR_045083 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA common_peak1_65_73_-0.449442360804436_5.98473218522673_0.920598702816666-2 chr8 36164463 36164875 + 0.920598702816666 NA Intergenic Intergenic 8659 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak1_65_73_-0.449442360804436_5.98473218522673_0.920598702816666 chr2 57123323 57123931 + 0.920598702816666 NA intron (NM_001139509, intron 1 of 7) CpG 376 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_174_173_-0.286040563695534_7.29992321400096_0.920419716851829 chr1 134097672 134099214 + 0.920419716851829 NA Intergenic Intergenic -12799 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_129_132_-0.324197321438686_6.89318377478185_0.919033821479413 chr8 70352486 70353292 + 0.919033821479413 NA exon (NM_001122829, exon 1 of 24) exon (NM_001122829, exon 1 of 24) 390 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_129_132_-0.324197321438686_6.89318377478185_0.919033821479413 chr16 38089451 38091089 + 0.919033821479413 NA 5' UTR (NM_019827, exon 1 of 11) 5' UTR (NM_019827, exon 1 of 11) -1010 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-3 chr13 42565585 42566220 + 0.918917574080418 NA Intergenic Intergenic -114897 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-6 chr5 91989522 91990181 + 0.918917574080418 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 2378 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding common_peak1_18_27_-0.831136487939212_4.391786678088_0.918917574080418-3 chr8 120004728 120004971 + 0.918917574080418 NA intron (NM_001310635, intron 1 of 14) intron (NM_001310635, intron 1 of 14) 12411 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-6 chr4 154248763 154249185 + 0.918917574080418 NA intron (NM_001162977, intron 5 of 36) intron (NM_001162977, intron 5 of 36) 50921 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-8 chr8 11359907 11360454 + 0.918917574080418 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -47354 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-8 chr7 29444825 29445136 + 0.918917574080418 NA intron (NM_001081028, intron 2 of 22) intron (NM_001081028, intron 2 of 22) 60480 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418 chr11 35474056 35474414 + 0.918917574080418 NA intron (NM_011412, intron 4 of 35) intron (NM_011412, intron 4 of 35) -142581 NR_029799 723924 NR_029799 ENSMUSG00000065583 Mir218-2 Mirn218-2|mir-218-2 microRNA 218-2 ncRNA unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418 chr10 16546026 16546524 + 0.918917574080418 NA Intergenic LFSINE_Vert|SINE|tRNA 549507 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-5 chr3 145103049 145103487 + 0.918917574080418 NA Intergenic Intergenic -4162 NM_178697 229933 Mm.331420 NM_178697 ENSMUSG00000036960 Clca2 4732440A06|AI586120|Clca5 chloride channel accessory 2 protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-7 chr5 123344948 123345557 + 0.918917574080418 NA intron (NM_029850, intron 1 of 5) CpG 804 NM_029850 77045 Mm.151960 NM_029850 ENSMUSG00000029438 Bcl7a 4432415N06Rik|AI448316 B cell CLL/lymphoma 7A protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-2 chr12 86084394 86084805 + 0.918917574080418 NA intron (NM_029601, intron 1 of 7) intron (NM_029601, intron 1 of 7) 2038 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-7 chr7 28925689 28925935 + 0.918917574080418 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 36520 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-3 chr16 94371705 94372163 + 0.918917574080418 NA promoter-TSS (NM_019543) promoter-TSS (NM_019543) -919 NM_001159617 56176 Mm.474449 NM_019543 ENSMUSG00000022940 Pigp Dcrc|Dscr5 phosphatidylinositol glycan anchor biosynthesis, class P protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-9 chr9 22259305 22259852 + 0.918917574080418 NA intron (NM_181419, intron 1 of 4) CpG 317 NM_181419 235048 Mm.292381 NM_181419 ENSMUSG00000062794 Zfp599 6720416P20 zinc finger protein 599 protein-coding unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-2 chr10 40153052 40153513 + 0.918917574080418 NA Intergenic Intergenic -11028 NM_001114332 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-5 chr3 107793736 107794188 + 0.918917574080418 NA Intergenic Intergenic -33493 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-4 chr18 82498247 82498913 + 0.918917574080418 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 23457 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_18_27_-0.831136487939212_4.391786678088_0.918917574080418-2 chr3 38257779 38258165 + 0.918917574080418 NA Intergenic Intergenic -49853 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_18_27_-0.831136487939212_4.391786678088_0.918917574080418-4 chr15 77733023 77733361 + 0.918917574080418 NA intron (NM_001168660, intron 1 of 2) intron (NM_001168660, intron 1 of 2) 4071 NM_001168660 71898 Mm.422856 NM_173743 ENSMUSG00000068246 Apol9b 2310016F22Rik apolipoprotein L 9b protein-coding common_peak1_18_27_-0.831136487939212_4.391786678088_0.918917574080418 chr10 7792469 7792679 + 0.918917574080418 NA promoter-TSS (NM_026141) promoter-TSS (NM_026141) -320 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-7 chr14 43532204 43532601 + 0.918917574080415 NA Intergenic Intergenic 75611 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-2 chr10 110919862 110920069 + 0.918917574080415 NA promoter-TSS (NM_007792) promoter-TSS (NM_007792) -211 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-6 chr6 90716025 90716494 + 0.918917574080415 NA exon (NM_001134383, exon 1 of 14) exon (NM_001134383, exon 1 of 14) 270 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-8 chr16 25263506 25263872 + 0.918917574080415 NA Intergenic Intergenic -23128 NM_175165 71338 Mm.126851 NM_175165 ENSMUSG00000048399 Tprg 5430420C16Rik|Tprg1 transformation related protein 63 regulated protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-10 chr8 114133732 114133983 + 0.918917574080415 NA 5' UTR (NM_001290181, exon 1 of 4) 5' UTR (NM_001290181, exon 1 of 4) 283 NM_024437 67528 Mm.27889 NM_024437 ENSMUSG00000031767 Nudt7 1300007B24Rik|2210404C19Rik nudix (nucleoside diphosphate linked moiety X)-type motif 7 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-5 chr5 146687630 146687944 + 0.918917574080415 NA Intergenic Intergenic -102548 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding common_peak2_32_16_0.679603143147419_4.42726441282405_0.918917574080415-2 chr10 122891813 122892127 + 0.918917574080415 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 93754 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-9 chr2 30753300 30753843 + 0.918917574080415 NA Intergenic Intergenic 32361 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-4 chr17 55959138 55959420 + 0.918917574080415 NA promoter-TSS (NM_028381) promoter-TSS (NM_028381) 92 NM_028381 72886 Mm.22796 NM_028381 ENSMUSG00000003208 Ccdc94 2900016D05Rik|AI413813 coiled-coil domain containing 94 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-10 chr3 32736440 32736728 + 0.918917574080415 NA promoter-TSS (NM_025316) promoter-TSS (NM_025316) 171 NM_029017 74600 Mm.288960 NM_029017 ENSMUSG00000037531 Mrpl47 4833424P18Rik|CGI-204|Gm9859|L47mt|MRP-L47|MTF/L47|NCM1 mitochondrial ribosomal protein L47 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-3 chr13 70725280 70725954 + 0.918917574080415 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -87983 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-2 chr1 89554837 89555396 + 0.918917574080415 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 100305 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-9 chr8 83593789 83594078 + 0.918917574080415 NA intron (NM_134118, intron 1 of 12) intron (NM_134118, intron 1 of 12) 558 NM_027179 106529 Mm.352239 NM_027179 ENSMUSG00000031708 Tecr 2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2 trans-2,3-enoyl-CoA reductase protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415 chr1 84881980 84882484 + 0.918917574080415 NA intron (NM_025386, intron 2 of 3) intron (NM_025386, intron 2 of 3) 42391 NM_025386 66153 Mm.381192 NM_025386 ENSMUSG00000073633 Fbxo36 0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e F-box protein 36 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-11 chr5 34534688 34534970 + 0.918917574080415 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -8536 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-14 chr9 69459419 69460010 + 0.918917574080415 NA intron (NM_007585, intron 1 of 12) intron (NM_007585, intron 1 of 12) 2770 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-3 chr1 91279488 91279833 + 0.918917574080415 NA intron (NM_001355764, intron 9 of 10) intron (NM_001355764, intron 9 of 10) -18678 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-13 chr6 83245676 83246213 + 0.918917574080415 NA intron (NM_001166067, intron 2 of 24) intron (NM_001166067, intron 2 of 24) 8569 NM_001166067 232156 Mm.333189 NM_001166067 ENSMUSG00000068323 Slc4a5 C330006M16|C330016K18Rik solute carrier family 4, sodium bicarbonate cotransporter, member 5 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-8 chr6 94648466 94648960 + 0.918917574080415 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -42298 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-12 chr6 57580826 57581465 + 0.918917574080415 NA exon (NM_025992, exon 1 of 23) exon (NM_025992, exon 1 of 23) 153 NM_025992 67138 Mm.297393 NM_025992 ENSMUSG00000029798 Herc6 1700121D12Rik|2510038N07Rik|4930427L17Rik|AI451296|CEB1|Herc5 hect domain and RLD 6 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-4 chr11 49090658 49091157 + 0.918917574080415 NA intron (NM_008330, intron 1 of 1) intron (NM_008330, intron 1 of 1) 3890 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_32_16_0.679603143147419_4.42726441282405_0.918917574080415 chr10 52233789 52234143 + 0.918917574080415 NA intron (NM_001347444, intron 1 of 9) CpG 347 NM_025705 66686 Mm.62982 NM_025705 ENSMUSG00000019891 Dcbld1 4631413K11Rik discoidin, CUB and LCCL domain containing 1 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-5 chr11 82035042 82035325 + 0.918917574080415 NA promoter-TSS (NM_011333) promoter-TSS (NM_011333) -394 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak2_32_16_0.679603143147419_4.42726441282405_0.918917574080415-3 chr16 57688433 57688812 + 0.918917574080415 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 66115 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-6 chr12 110446636 110446965 + 0.918917574080415 NA promoter-TSS (NM_001135001) promoter-TSS (NM_001135001) -379 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415 chr10 80116618 80117141 + 0.918917574080415 NA exon (NM_011492, exon 1 of 10) exon (NM_011492, exon 1 of 10) 1076 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak1_32_16_0.679603143147419_4.42726441282405_0.918917574080415-7 chr6 93724365 93724729 + 0.918917574080415 NA intron (NM_001029850, intron 12 of 23) intron (NM_001029850, intron 12 of 23) 188416 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak2_151_152_-0.302334347293994_7.10622066904565_0.918916476645382 chr9 107554681 107556368 + 0.918916476645382 NA intron (NM_019713, intron 1 of 4) intron (NM_019713, intron 1 of 4) 941 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak2_667_486_0.147984450797715_9.0017701874812_0.918470556817864 chr6 31084907 31090731 + 0.918470556817864 NA Intergenic Intergenic -24726 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_173_115_0.290712648903906_7.00333731957952_0.918122728223815-3 chr8 94290902 94292763 + 0.918122728223815 NA intron (NM_001357268, intron 3 of 20) intron (NM_001357268, intron 3 of 20) 23226 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_173_115_0.290712648903906_7.00333731957952_0.918122728223815-2 chr8 90827631 90829587 + 0.918122728223815 NA promoter-TSS (NM_177224) promoter-TSS (NM_177224) -226 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_173_115_0.290712648903906_7.00333731957952_0.918122728223815 chr3 34170964 34171961 + 0.918122728223815 NA Intergenic Intergenic -90108 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-6 chr12 4476637 4477062 + 0.917676348953458 NA 5' UTR (NM_010881, exon 1 of 23) 5' UTR (NM_010881, exon 1 of 23) 333 NM_010881 17977 Mm.301039 NM_010881 ENSMUSG00000020647 Ncoa1 KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1 nuclear receptor coactivator 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-26 chr4 129190720 129190978 + 0.917676348953458 NA intron (NM_134151, intron 1 of 12) intron (NM_134151, intron 1 of 12) 1054 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-23 chr3 41375102 41375361 + 0.917676348953458 NA Intergenic Intergenic 117968 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-4 chr2 13271698 13271957 + 0.917676348953458 NA promoter-TSS (NM_009105) promoter-TSS (NM_009105) -412 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-3 chr4 43025576 43025828 + 0.917676348953458 NA promoter-TSS (NM_020035) promoter-TSS (NM_020035) 72 NM_020035 56703 Mm.143738 NM_020035 ENSMUSG00000028454 Pigo PIG-O phosphatidylinositol glycan anchor biosynthesis, class O protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-7 chr13 16761725 16762057 + 0.917676348953458 NA Intergenic Intergenic -738468 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-8 chr15 80063847 80064066 + 0.917676348953458 NA Intergenic Intergenic 14623 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-16 chr6 124699787 124700022 + 0.917676348953458 NA intron (NM_145130, intron 3 of 12) intron (NM_145130, intron 3 of 12) 12274 NM_013536 14791 Mm.6390 NM_013536 ENSMUSG00000004268 Emg1 C2f|Grcc2f EMG1 N1-specific pseudouridine methyltransferase protein-coding common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458 chr11 88532694 88533018 + 0.917676348953458 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -86395 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-9 chr8 77488321 77488535 + 0.917676348953458 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -28628 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_22_10_0.790476662732202_3.8546699500034_0.917676348953458 chr19 6117677 6117893 + 0.917676348953458 NA intron (NM_133678, intron 1 of 1) intron (NM_133678, intron 1 of 1) 801 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-12 chr3 51553041 51553576 + 0.917676348953458 NA intron (NM_080793, intron 1 of 7) intron (NM_080793, intron 1 of 7) -6449 NR_033624 100039684 Mm.387178 NR_033624 5031434O11Rik AI481280|Gm2370 RIKEN cDNA 5031434O11 gene ncRNA unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-2 chr11 50377013 50377395 + 0.917676348953458 NA promoter-TSS (NM_021510) promoter-TSS (NM_021510) -515 NM_021510 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-21 chr2 168458987 168459344 + 0.917676348953458 NA Intergenic Intergenic 131200 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-12 chr15 31334405 31334682 + 0.917676348953458 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 33216 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-15 chr5 105523129 105523364 + 0.917676348953458 NA intron (NM_133897, intron 1 of 3) intron (NM_133897, intron 1 of 3) 3775 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_11_19_-1.00399746886887_3.81992936045293_0.917676348953458 chr18 68059417 68059619 + 0.917676348953458 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 126345 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-9 chr14 31930026 31930274 + 0.917676348953458 NA Intergenic Intergenic -98953 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding common_peak1_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-2 chr2 26237124 26237330 + 0.917676348953458 NA exon (NM_001302956, exon 1 of 12) exon (NM_001302956, exon 1 of 12) 172 NM_153559 227638 Mm.116769 NM_153559 ENSMUSG00000036327 Qsox2 BC030934|Qscn6l1|Soxn quiescin Q6 sulfhydryl oxidase 2 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-37 chrX 98937637 98938223 + 0.917676348953458 NA 5' UTR (NM_207633, exon 1 of 7) 5' UTR (NM_207633, exon 1 of 7) 149 NM_207633 77929 Mm.212290 NM_207633 ENSMUSG00000047694 Yipf6 A430107J06Rik Yip1 domain family, member 6 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-20 chr9 56924213 56924611 + 0.917676348953458 NA intron (NM_175483, intron 1 of 1) intron (NM_175483, intron 1 of 1) 3959 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-14 chr4 57651734 57652064 + 0.917676348953458 NA intron (NM_001304544, intron 3 of 8) intron (NM_001304544, intron 3 of 8) 83651 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-5 chr13 114679191 114679552 + 0.917676348953458 NA intron (NR_045976, intron 3 of 6) intron (NR_045976, intron 3 of 6) 72143 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-30 chr6 127359035 127359372 + 0.917676348953458 NA Intergenic Intergenic -51236 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-2 chr18 38192874 38193118 + 0.917676348953458 NA Intergenic Intergenic 16766 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-15 chr18 38184771 38185120 + 0.917676348953458 NA Intergenic Intergenic 24817 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-31 chr7 99403799 99404204 + 0.917676348953458 NA intron (NM_201352, intron 2 of 17) intron (NM_201352, intron 2 of 17) 22483 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-7 chr3 122043027 122043349 + 0.917676348953458 NA Intergenic Intergenic -1272 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-18 chr2 61139258 61139566 + 0.917676348953458 NA Intergenic Intergenic -164261 NR_045335 100038493 Mm.388076 NR_045335 ENSMUSG00000075325 Gm13582 - predicted gene 13582 ncRNA unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-28 chr5 136199608 136199850 + 0.917676348953458 NA promoter-TSS (NM_025774) promoter-TSS (NM_025774) -775 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-8 chr7 130963673 130964054 + 0.917676348953458 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 27660 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-4 chr11 86853291 86853934 + 0.917676348953458 NA Intergenic B2_Mm2|SINE|B2 -45952 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-25 chr4 129021567 129021908 + 0.917676348953458 NA Intergenic Intergenic 28513 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-10 chr2 32749375 32749658 + 0.917676348953458 NA exon (NM_001252547, exon 6 of 11) exon (NM_001252547, exon 6 of 11) -7718 NR_045485 30933 Mm.200695 NM_152800 ENSMUSG00000009563 Tor2a Prosalusin torsin family 2, member A protein-coding common_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-4 chrX 19162703 19162957 + 0.917676348953458 NA Intergenic Intergenic -15859 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak2_22_10_0.790476662732202_3.8546699500034_0.917676348953458-2 chr8 36175065 36175264 + 0.917676348953458 NA Intergenic Intergenic 19154 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-9 chr2 28244228 28244615 + 0.917676348953458 NA Intergenic Intergenic 38732 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-3 chr11 30198464 30198895 + 0.917676348953458 NA promoter-TSS (NM_009260) promoter-TSS (NM_009260) -422 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-10 chr14 46512925 46513302 + 0.917676348953458 NA Intergenic Intergenic 62738 NR_046459 100873094 Mm.318596 NR_046459 ENSMUSG00000085123 Rubie - RNA upstream of Bmp4 expressed in inner ear ncRNA unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-13 chr4 43605044 43605491 + 0.917676348953458 NA Intergenic Intergenic -20773 NM_001099314 100039672 Mm.415110 NM_001099314 ENSMUSG00000078719 Msmp Psmp microseminoprotein, prostate associated protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-3 chr11 68902579 68902862 + 0.917676348953458 NA intron (NM_009080, intron 2 of 3) intron (NM_009080, intron 2 of 3) 1131 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 - ribosomal protein L26 pseudogene pseudo unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458 chr10 83354043 83354321 + 0.917676348953458 NA Intergenic Intergenic -6039 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-33 chr8 25065393 25065708 + 0.917676348953458 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -26588 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458 chr1 160045252 160045574 + 0.917676348953458 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 1033 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-17 chr7 24470688 24470953 + 0.917676348953458 NA intron (NM_011113, intron 3 of 6) intron (NM_011113, intron 3 of 6) 8337 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-13 chr15 98049720 98049963 + 0.917676348953458 NA intron (NM_144851, intron 13 of 17) intron (NM_144851, intron 13 of 17) -42748 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding unique_peak1_11_19_-1.00399746886887_3.81992936045293_0.917676348953458 chr4 134768973 134769173 + 0.917676348953458 NA Intergenic Intergenic -1069 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-20 chr2 127252528 127252884 + 0.917676348953458 NA intron (NM_175145, intron 2 of 3) intron (NM_175145, intron 2 of 3) 4731 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-2 chr10 60210614 60210871 + 0.917676348953458 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 8518 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-27 chr5 3289779 3290194 + 0.917676348953458 NA Intergenic Intergenic -53907 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-16 chr18 84089008 84089424 + 0.917676348953458 NA intron (NM_146090, intron 1 of 1) intron (NM_146090, intron 1 of 1) 1058 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-36 chr9 121001191 121001611 + 0.917676348953458 NA intron (NM_177589, intron 35 of 36) intron (NM_177589, intron 35 of 36) 46315 NR_106058 102465661 NR_106058 ENSMUSG00000106193 Mir7090 mmu-mir-7090 microRNA 7090 ncRNA common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-5 chr3 121615391 121615593 + 0.917676348953458 NA Intergenic Intergenic 27993 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-7 chr15 55090110 55090444 + 0.917676348953458 NA exon (NM_001355594, exon 1 of 10) exon (NM_001355594, exon 1 of 10) 214 NM_183089 72107 Mm.486550 NM_183089 ENSMUSG00000022422 Dscc1 2010006I05Rik|2600005O03Rik|Dcc1 DNA replication and sister chromatid cohesion 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-24 chr3 57501942 57502253 + 0.917676348953458 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 73779 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-2 chr1 74047023 74047351 + 0.917676348953458 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 77260 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-19 chr2 109419650 109420071 + 0.917676348953458 NA Intergenic Intergenic 139122 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-32 chr8 11298681 11298996 + 0.917676348953458 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -13967 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-21 chr9 107563350 107563731 + 0.917676348953458 NA intron (NM_019742, intron 1 of 2) intron (NM_019742, intron 1 of 2) 285 NM_019742 80385 Mm.21739 NM_019742 ENSMUSG00000010054 Tusc2 1190001E22Rik|AA407686|Fus1|Lgcc|PAP|Pdap2 tumor suppressor candidate 2 protein-coding common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-6 chr3 121619225 121619473 + 0.917676348953458 NA Intergenic Intergenic 24136 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-35 chr9 72531704 72531980 + 0.917676348953458 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 16 NR_045735 75115 Mm.280755 NR_045735 ENSMUSG00000096986 4930509E16Rik - RIKEN cDNA 4930509E16 gene ncRNA unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-11 chr2 173254838 173255235 + 0.917676348953458 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 21497 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-6 chr14 34099584 34099931 + 0.917676348953458 NA 3' UTR (NM_001281845, exon 12 of 12) 3' UTR (NM_001281845, exon 12 of 12) 2997 NM_001251843 105518 Mm.246608 NM_001251843 ENSMUSG00000095493 A630023A22Rik AI461879 RIKEN cDNA A630023A22 gene protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-11 chr15 25844748 25844990 + 0.917676348953458 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 1571 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-5 chr11 94718868 94719147 + 0.917676348953458 NA Intergenic Intergenic -14508 NM_001007584 432589 Mm.342314 NM_001007584 ENSMUSG00000056008 Gm11541 - predicted gene 11541 protein-coding common_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458 chr1 62723852 62724234 + 0.917676348953458 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 20726 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-3 chr18 60625642 60626092 + 0.917676348953458 NA Intergenic Intergenic -1562 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-4 chr12 102288400 102288647 + 0.917676348953458 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 4882 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-19 chr8 83736887 83737115 + 0.917676348953458 NA intron (NM_011925, intron 1 of 19) intron (NM_011925, intron 1 of 19) 4310 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-22 chr2 173784477 173784823 + 0.917676348953458 NA TTS (NM_019806) TTS (NM_019806) 47079 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-14 chr17 33929919 33930312 + 0.917676348953458 NA TTS (NM_009318) TTS (NM_009318) 221 NM_009059 19732 Mm.43777 NM_009059 ENSMUSG00000041354 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-34 chr8 72548602 72548824 + 0.917676348953458 NA promoter-TSS (NM_027485) promoter-TSS (NM_027485) -403 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding unique_peak2_11_19_-1.00399746886887_3.81992936045293_0.917676348953458-18 chr8 44939804 44940050 + 0.917676348953458 NA Intergenic Intergenic -10281 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-8 chr13 51764907 51765225 + 0.917676348953458 NA intron (NM_013660, intron 1 of 15) intron (NM_013660, intron 1 of 15) 28681 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-29 chr6 35381390 35381724 + 0.917676348953458 NA Intergenic Intergenic 50711 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA unique_peak1_22_10_0.790476662732202_3.8546699500034_0.917676348953458-17 chr19 12764076 12764343 + 0.917676348953458 NA non-coding (NR_024093, exon 13 of 13) non-coding (NR_024093, exon 13 of 13) 1423 NM_170786 12803 Mm.290924 NM_053007 ENSMUSG00000079415 Cntf AI429687 ciliary neurotrophic factor protein-coding common_peak1_213_144_0.265201967440981_7.31251007373542_0.916512524648723 chr16 4639901 4641667 + 0.916512524648723 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 839 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding common_peak2_213_144_0.265201967440981_7.31251007373542_0.916512524648723 chr8 34145547 34147360 + 0.916512524648723 NA intron (NM_026609, intron 1 of 3) CpG 286 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak2_139_90_0.329451393200619_6.67252033679901_0.915573858129908 chr19 10604753 10605417 + 0.915573858129908 NA promoter-TSS (NM_145496) promoter-TSS (NM_145496) -540 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak2_109_114_-0.353712729166681_6.66863368636103_0.915573858129908 chr5 108461316 108462932 + 0.915573858129908 NA intron (NM_172716, intron 1 of 10) intron (NM_172716, intron 1 of 10) 792 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding common_peak1_98_61_0.386650296665094_6.14752145871942_0.914750942382709 chr1 34011326 34012780 + 0.914750942382709 NA intron (NM_134448, intron 1 of 97) intron (NM_134448, intron 1 of 97) 228 NM_134448 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak1_98_61_0.386650296665094_6.14752145871942_0.914750942382709-2 chr17 72836669 72837602 + 0.914750942382709 NA promoter-TSS (NM_001357370) promoter-TSS (NM_001357370) -401 NM_001357369 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee like 5 protein-coding common_peak2_98_61_0.386650296665094_6.14752145871942_0.914750942382709 chr3 69316173 69316753 + 0.914750942382709 NA promoter-TSS (NM_178726) promoter-TSS (NM_178726) -455 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak2_73_81_-0.433646243133886_6.14072888305114_0.914750942382696 chr5 124353739 124354839 + 0.914750942382696 NA intron (NM_013812, intron 1 of 3) CpG 339 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak2_187_125_0.28227142065565_7.11841563382774_0.914456066125253 chr13 51968869 51970021 + 0.914456066125253 NA Intergenic Intergenic 122770 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_230_222_-0.246284825094905_7.67775748737285_0.913982952418099 chr19 16131929 16134141 + 0.913982952418099 NA 5' UTR (NM_008139, exon 1 of 7) 5' UTR (NM_008139, exon 1 of 7) 204 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak2_162_107_0.300255487560956_6.90501524594395_0.913863405173818 chr5 24423889 24425034 + 0.913863405173818 NA promoter-TSS (NM_009207) promoter-TSS (NM_009207) -771 NM_009207 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding common_peak1_90_97_-0.39456759965921_6.4174260442856_0.913749359973624 chr19 53554644 53555132 + 0.913749359973624 NA Intergenic Intergenic 25570 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_118_75_0.356507413893753_6.42618122039046_0.913749359973624 chr14 24244811 24246021 + 0.913749359973624 NA exon (NM_027726, exon 1 of 31) exon (NM_027726, exon 1 of 31) 504 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding common_peak2_90_97_-0.39456759965921_6.4174260442856_0.913749359973624 chr10 85102306 85103790 + 0.913749359973624 NA promoter-TSS (NM_010214) promoter-TSS (NM_010214) 421 NM_001013028 103266 Mm.335025 NM_001013028 ENSMUSG00000060935 Tmem263 AI597468 transmembrane protein 263 protein-coding common_peak1_141_143_-0.312359239308824_7.0137453817879_0.913340083417317 chr2 26910803 26911857 + 0.913340083417317 NA promoter-TSS (NM_011513) promoter-TSS (NM_011513) 523 NM_013721 27176 Mm.328601 NM_013721 ENSMUSG00000062647 Rpl7a Surf3 ribosomal protein L7A protein-coding common_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-2 chr6 13871066 13871798 + 0.913161965438649 NA promoter-TSS (NM_001352887) promoter-TSS (NM_001352887) 86 NM_001352887 66520 Mm.29615 NM_183258 2610001J05Rik C79299 RIKEN cDNA 2610001J05 gene protein-coding unique_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649 chr11 96257779 96258422 + 0.913161965438649 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) 6440 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA common_peak1_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-3 chr5 33820932 33821322 + 0.913161965438649 NA Intergenic CpG -21985 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding common_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-5 chr9 105395428 105395783 + 0.913161965438649 NA promoter-TSS (NM_172461) promoter-TSS (NM_172461) 243 NR_152139 66595 Mm.84941 NM_025651 ENSMUSG00000032567 Aste1 1100001A21Rik|AV006403 asteroid homolog 1 protein-coding common_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-3 chr6 127329675 127330144 + 0.913161965438649 NA Intergenic Intergenic -21942 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-4 chr7 96951314 96952011 + 0.913161965438649 NA 5' UTR (NM_153591, exon 1 of 14) 5' UTR (NM_153591, exon 1 of 14) 135 NM_153591 244141 Mm.274864 NM_153591 ENSMUSG00000018995 Nars2 AI875199 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649 chr4 54945842 54946441 + 0.913161965438649 NA Intergenic Intergenic -1804 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_33_42_-0.616433897365646_5.11804780601928_0.913161965438649 chr10 44078341 44079045 + 0.913161965438649 NA Intergenic Intergenic -73847 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding common_peak1_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-2 chr4 106859843 106860233 + 0.913161965438649 NA Intergenic Intergenic -51432 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding unique_peak2_33_42_-0.616433897365646_5.11804780601928_0.913161965438649-2 chr18 36382776 36383883 + 0.913161965438649 NA intron (NM_001081365, intron 2 of 2) intron (NM_001081365, intron 2 of 2) 34705 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding common_peak1_50_28_0.532685464436335_5.12432372734574_0.913161965438643 chr12 84844884 84845660 + 0.913161965438643 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -30530 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak1_50_28_0.532685464436335_5.12432372734574_0.913161965438643-2 chr2 3284469 3284909 + 0.913161965438643 NA intron (NM_008708, intron 1 of 13) CpG 477 NM_001290370 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding common_peak2_50_28_0.532685464436335_5.12432372734574_0.913161965438643-2 chr15 83592914 83593307 + 0.913161965438643 NA intron (NM_183017, intron 1 of 13) intron (NM_183017, intron 1 of 13) 2047 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding common_peak2_50_28_0.532685464436335_5.12432372734574_0.913161965438643 chr1 161969322 161969851 + 0.913161965438643 NA promoter-TSS (NM_001204905) promoter-TSS (NM_001204905) 398 NM_001039045 67292 Mm.45106 NM_026078 ENSMUSG00000026698 Pigc 3110030E07Rik|AW212108 phosphatidylinositol glycan anchor biosynthesis, class C protein-coding common_peak2_50_28_0.532685464436335_5.12432372734574_0.913161965438643-3 chr19 60940325 60940863 + 0.913161965438643 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 50845 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_50_28_0.532685464436335_5.12432372734574_0.913161965438643-3 chr2 57156422 57156799 + 0.913161965438643 NA intron (NR_040356, intron 1 of 2) intron (NR_040356, intron 1 of 2) 25144 NR_040356 767815 Mm.188065 NR_040356 ENSMUSG00000084938 BB557941 - expressed sequence BB557941 ncRNA common_peak1_50_28_0.532685464436335_5.12432372734574_0.913161965438643-4 chr2 80314299 80315072 + 0.913161965438643 NA promoter-TSS (NM_024181) promoter-TSS (NM_024181) -781 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak2_51_60_-0.512254142681018_5.67461026622238_0.913104017362139 chr9 104262320 104262881 + 0.913104017362139 NA intron (NM_001359740, intron 1 of 56) CpG 330 NM_001359740 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding common_peak1_51_60_-0.512254142681018_5.67461026622238_0.913104017362139 chr8 111094666 111095156 + 0.913104017362139 NA intron (NM_198308, intron 1 of 17) CpG 166 NM_198308 319518 Mm.28350 NM_198308 ENSMUSG00000033624 Pdpr 4930402E16Rik|AU018056|mKIAA1990 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding common_peak1_72_43_0.444983816928629_5.68192352710161_0.913104017362127-2 chr9 32710588 32711474 + 0.913104017362127 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 14989 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_72_43_0.444983816928629_5.68192352710161_0.913104017362127 chr15 101368687 101369185 + 0.913104017362127 NA promoter-TSS (NR_035462) promoter-TSS (NR_035462) -416 NR_035462 100316694 NR_035462 ENSMUSG00000088459 Mir1941 mmu-mir-1941 microRNA 1941 ncRNA common_peak2_72_43_0.444983816928629_5.68192352710161_0.913104017362127-2 chr7 142374223 142375203 + 0.913104017362127 NA promoter-TSS (NM_001347541) promoter-TSS (NM_001347541) -967 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_72_43_0.444983816928629_5.68192352710161_0.913104017362127 chr7 105735737 105736470 + 0.913104017362127 NA promoter-TSS (NM_010562) promoter-TSS (NM_010562) 481 NM_025897 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak1_217_210_-0.249459283151984_7.59636954713119_0.912814895468703 chr15 99818844 99820734 + 0.912814895468703 NA exon (NM_001113545, exon 4 of 11) exon (NM_001113545, exon 4 of 11) 360 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_82_89_-0.403529475438757_6.2900883586103_0.912810542080663 chr16 55838279 55839356 + 0.912810542080663 NA promoter-TSS (NM_030612) promoter-TSS (NM_030612) -176 NM_001159395 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_200_135_0.267870799044259_7.22139824077247_0.912763216838101 chr5 28316352 28317817 + 0.912763216838101 NA promoter-TSS (NM_028234) promoter-TSS (NM_028234) -105 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak1_242_166_0.243458783307773_7.50543368412794_0.912695055529132 chr19 38022183 38023757 + 0.912695055529132 NA intron (NM_001302140, intron 2 of 53) intron (NM_001302140, intron 2 of 53) 20607 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-8 chr7 64287088 64287433 + 0.912223620338476 NA promoter-TSS (NM_172742) promoter-TSS (NM_172742) -410 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-16 chr8 44974995 44975358 + 0.912223620338476 NA intron (NM_001081286, intron 1 of 25) intron (NM_001081286, intron 1 of 25) 24968 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-3 chr10 120632294 120632666 + 0.912223620338476 NA Intergenic Intergenic -133252 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-11 chr3 22701055 22701382 + 0.912223620338476 NA Intergenic Intergenic 449848 NR_004439 19784 NR_004439 Rprl2 RPRH3|Rmrp3 ribonuclease P RNA-like 2 ncRNA unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-5 chr15 81073386 81073592 + 0.912223620338476 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 31558 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-13 chr7 139971220 139971445 + 0.912223620338476 NA TTS (NM_001347613) TTS (NM_001347613) 7423 NM_001347614 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-8 chr19 46483095 46483510 + 0.912223620338476 NA intron (NM_001025391, intron 10 of 11) intron (NM_001025391, intron 10 of 11) -18346 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-4 chr14 65592637 65592938 + 0.912223620338476 NA intron (NM_028811, intron 1 of 14) intron (NM_028811, intron 1 of 14) 325 NM_001253812 74195 Mm.29719 NM_028811 ENSMUSG00000022031 Elp3 2610507P14Rik|KAT9 elongator acetyltransferase complex subunit 3 protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-3 chr11 33661034 33661403 + 0.912223620338476 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) -82261 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-4 chr13 98497550 98497958 + 0.912223620338476 NA Intergenic Intergenic -62689 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-9 chr2 74714518 74714903 + 0.912223620338476 NA intron (NR_027899, intron 1 of 2) intron (NR_027899, intron 1 of 2) 1420 NR_027899 73429 Mm.443313 NR_027899 Hoxd3os1 1700064D17Rik|1700109F18Rik homeobox D3, opposite strand 1 ncRNA unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-7 chr19 43559614 43560076 + 0.912223620338476 NA Intergenic Intergenic -35240 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-11 chr5 125246190 125246522 + 0.912223620338476 NA Intergenic Intergenic -67142 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-3 chr10 61783507 61783962 + 0.912223620338476 NA intron (NM_207000, intron 1 of 8) CpG 130 NM_207000 404634 Mm.272870 NM_207000 ENSMUSG00000020086 H2afy2 macroH2A2 H2A histone family, member Y2 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-3 chr11 53761506 53761831 + 0.912223620338476 NA Intergenic Intergenic 1986 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-5 chr14 60251678 60251883 + 0.912223620338476 NA promoter-TSS (NM_170591) promoter-TSS (NM_170591) -301 NM_001362439 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-5 chr13 41016257 41016537 + 0.912223620338476 NA 5' UTR (NM_025387, exon 1 of 6) 5' UTR (NM_025387, exon 1 of 6) 147 NM_001360770 66154 Mm.30005 NM_025387 ENSMUSG00000021361 Tmem14c 1110021D01Rik|AU020193|HSPC194 transmembrane protein 14C protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-14 chr5 113204566 113204968 + 0.912223620338476 NA Intergenic Intergenic -22142 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-15 chr9 72700264 72700839 + 0.912223620338476 NA intron (NM_001357998, intron 1 of 23) RMER10A|LTR|ERVL 7253 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-3 chr3 79181740 79181941 + 0.912223620338476 NA Intergenic Intergenic -31079 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-2 chr1 71651054 71651278 + 0.912223620338476 NA intron (NM_001276412, intron 2 of 44) intron (NM_001276412, intron 2 of 44) 2068 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476 chr1 77694706 77695151 + 0.912223620338476 NA Intergenic Intergenic -179840 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-5 chr15 10791671 10792008 + 0.912223620338476 NA Intergenic Intergenic -37212 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-7 chr14 16511363 16511608 + 0.912223620338476 NA intron (NM_001289760, intron 4 of 9) intron (NM_001289760, intron 4 of 9) 63991 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-12 chr7 38226625 38227160 + 0.912223620338476 NA intron (NM_024413, intron 1 of 1) PB1D10|SINE|Alu 1102 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476 chr10 120616219 120616511 + 0.912223620338476 NA Intergenic Intergenic -139896 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-10 chr8 106560702 106561090 + 0.912223620338476 NA Intergenic B1_Mur4|SINE|Alu -26247 NR_045470 68692 Mm.416843 NR_045470 ENSMUSG00000099139 1110028F18Rik - RIKEN cDNA 1110028F18 gene ncRNA common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476 chr10 4113351 4113703 + 0.912223620338476 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 99593 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak2_27_13_0.724344171734321_4.16952700792476_0.912223620338476-4 chr3 126595924 126596177 + 0.912223620338476 NA promoter-TSS (NM_001293665) promoter-TSS (NM_001293665) -901 NM_001346636 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-11 chr8 46780645 46780863 + 0.912223620338476 NA intron (NR_152560, intron 1 of 7) intron (NR_152560, intron 1 of 7) 41009 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-8 chr2 73609496 73609997 + 0.912223620338476 NA TTS (NM_001166604) TTS (NM_001166604) 13220 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-10 chr3 28171766 28172221 + 0.912223620338476 NA Intergenic Intergenic -91221 NM_001163007 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding common_peak2_27_13_0.724344171734321_4.16952700792476_0.912223620338476-3 chr17 78351636 78351932 + 0.912223620338476 NA intron (NM_015800, intron 12 of 16) intron (NM_015800, intron 12 of 16) 66368 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-7 chr19 29216925 29217205 + 0.912223620338476 NA Intergenic Intergenic -34738 NM_001048177 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-6 chr14 65262145 65262418 + 0.912223620338476 NA intron (NM_021458, intron 1 of 6) CpG 182 NM_021458 14365 Mm.214687 NM_021458 ENSMUSG00000007989 Fzd3 AU020229|D930050A07Rik|Fz3 frizzled class receptor 3 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-2 chr10 43657852 43658179 + 0.912223620338476 NA Intergenic Intergenic 64588 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-15 chr6 146884795 146884991 + 0.912223620338476 NA Intergenic Intergenic -3601 NM_001355728 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-9 chr2 83701044 83701280 + 0.912223620338476 NA Intergenic Intergenic -23235 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-9 chr7 101310571 101310807 + 0.912223620338476 NA Intergenic Intergenic -6397 NM_001360460 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-14 chr8 105750438 105750756 + 0.912223620338476 NA intron (NM_027469, intron 1 of 2) intron (NM_027469, intron 1 of 2) 8010 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding common_peak2_27_13_0.724344171734321_4.16952700792476_0.912223620338476-2 chr10 10556673 10556940 + 0.912223620338476 NA intron (NM_026405, intron 1 of 2) intron (NM_026405, intron 1 of 2) 1401 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding common_peak1_15_23_-0.85492245650336_4.15750127246948_0.912223620338476 chr10 81559652 81560014 + 0.912223620338476 NA intron (NM_001276288, intron 1 of 6) intron (NM_001276288, intron 1 of 6) 389 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-4 chr12 17510637 17510956 + 0.912223620338476 NA Intergenic Intergenic -34077 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-10 chr2 80616839 80617428 + 0.912223620338476 NA promoter-TSS (NM_024438) promoter-TSS (NM_024438) -81 NM_024438 68082 Mm.306818 NM_024438 ENSMUSG00000027001 Dusp19 5930436K22Rik|C79103|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-10 chr7 126696068 126696422 + 0.912223620338476 NA promoter-TSS (NM_029420) promoter-TSS (NM_029420) 245 NM_175103 66162 Mm.358692 NM_175103 ENSMUSG00000047721 Bola2 1110025L05Rik|BolA-2 bolA-like 2 (E. coli) protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-7 chr18 80541808 80542415 + 0.912223620338476 NA non-coding (NR_028424, exon 4 of 4) non-coding (NR_028424, exon 4 of 4) 2435 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-2 chr10 128978763 128979162 + 0.912223620338476 NA TTS (NR_152816) TTS (NR_152816) 7765 NR_152816 77699 Mm.415100 NR_152816 ENSMUSG00000097691 9030616G12Rik - RIKEN cDNA 9030616G12 gene ncRNA unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-8 chr2 20944500 20944967 + 0.912223620338476 NA intron (NM_001128084, intron 1 of 24) intron (NM_001128084, intron 1 of 24) 22988 NM_001081364 71435 Mm.28507 NM_001081364 ENSMUSG00000036591 Arhgap21 5530401C11Rik|AA416458|ARHGAP10 Rho GTPase activating protein 21 protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-6 chr15 77805233 77805850 + 0.912223620338476 NA intron (NM_022410, intron 3 of 40) MER20|DNA|hAT-Charlie 36634 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_27_13_0.724344171734321_4.16952700792476_0.912223620338476-5 chr8 84908645 84908984 + 0.912223620338476 NA exon (NM_010062, exon 1 of 6) exon (NM_010062, exon 1 of 6) 190 NM_010062 13423 Mm.350831 NM_010062 ENSMUSG00000003812 Dnase2a Dnase2 deoxyribonuclease II alpha protein-coding unique_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-2 chr1 93236248 93236721 + 0.912223620338476 NA intron (NM_172463, intron 1 of 30) CpG 587 NM_172463 208777 Mm.271897 NM_172463 ENSMUSG00000047793 Sned1 6720455I24Rik|AI197264|AI642697|D430044C15Rik|SST3|Snep sushi, nidogen and EGF-like domains 1 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-12 chr9 95637381 95637788 + 0.912223620338476 NA promoter-TSS (NM_029620) promoter-TSS (NM_029620) -44 NM_029620 76477 Mm.46016 NM_029620 ENSMUSG00000015354 Pcolce2 2400001O18Rik|Pcpe2 procollagen C-endopeptidase enhancer 2 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-4 chr11 97186588 97186956 + 0.912223620338476 NA intron (NM_008379, intron 2 of 21) intron (NM_008379, intron 2 of 21) 1120 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-6 chr18 69415264 69415568 + 0.912223620338476 NA intron (NM_001361128, intron 3 of 19) intron (NM_001361128, intron 3 of 19) 69256 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak1_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-2 chr17 31325811 31326049 + 0.912223620338476 NA intron (NM_001242427, intron 9 of 19) intron (NM_001242427, intron 9 of 19) 29706 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_27_13_0.724344171734321_4.16952700792476_0.912223620338476 chr10 7120602 7120887 + 0.912223620338476 NA intron (NM_172546, intron 12 of 12) intron (NM_172546, intron 12 of 12) 91493 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-9 chr6 35330204 35330428 + 0.912223620338476 NA promoter-TSS (NR_040526) promoter-TSS (NR_040526) -530 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-13 chr5 91275267 91275967 + 0.912223620338476 NA intron (NR_040428, intron 3 of 5) intron (NR_040428, intron 3 of 5) 7459 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-6 chr13 60936317 60936576 + 0.912223620338476 NA intron (NM_007796, intron 1 of 4) intron (NM_007796, intron 1 of 4) 120 NM_001145799 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak2_15_23_-0.85492245650336_4.15750127246948_0.912223620338476 chr1 40224578 40224843 + 0.912223620338476 NA promoter-TSS (NM_008362) promoter-TSS (NM_008362) -370 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_27_13_0.724344171734321_4.16952700792476_0.912223620338476-12 chr4 129259880 129260305 + 0.912223620338476 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) 1312 NM_001285867 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak1_15_23_-0.85492245650336_4.15750127246948_0.912223620338476-4 chr7 101310592 101310799 + 0.912223620338476 NA Intergenic Intergenic -6391 NM_001360460 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding common_peak1_89_55_0.396958245795735_6.00583404495547_0.910921989990114 chr9 41474835 41475617 + 0.910921989990114 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 333 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_66_74_-0.447265672855493_6.00518585406813_0.910921989990114 chr13 110929944 110930744 + 0.910921989990114 NA Intergenic Intergenic -26498 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_66_74_-0.447265672855493_6.00518585406813_0.910921989990114-2 chr15 38470997 38471773 + 0.910921989990114 NA Intergenic Intergenic 19162 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_66_74_-0.447265672855493_6.00518585406813_0.910921989990114-3 chr3 121696866 121698032 + 0.910921989990114 NA Intergenic LTR78|LTR|ERV1 -26088 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_129_83_0.338767691283743_6.56170126842063_0.910321572693031 chr3 95893882 95894805 + 0.910321572693031 NA intron (NM_146104, intron 1 of 5) intron (NM_146104, intron 1 of 5) 422 NM_146134 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding common_peak1_101_106_-0.357855506410485_6.5625392331959_0.910321572693006 chr7 35802248 35803052 + 0.910321572693006 NA promoter-TSS (NR_033567) promoter-TSS (NR_033567) 58 NR_033567 78547 Mm.406883 NR_033567 ENSMUSG00000044997 E130304I02Rik - RIKEN cDNA E130304I02 gene ncRNA common_peak2_101_106_-0.357855506410485_6.5625392331959_0.910321572693006 chr12 85110473 85111645 + 0.910321572693006 NA intron (NM_030225, intron 1 of 14) CpG 226 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak2_190_187_-0.272358666730621_7.41840951831233_0.91025309936065 chr8 85026841 85027904 + 0.91025309936065 NA intron (NM_026760, intron 1 of 2) CpG 539 NM_026760 68544 Mm.196005 NM_026760 ENSMUSG00000041203 Trir 1110002H14Rik|2310036O22Rik|AI854688 telomerase RNA component interacting RNase protein-coding common_peak2_59_67_-0.463985275624454_5.85547020343811_0.910002444715801 chr18 10467836 10469323 + 0.910002444715801 NA intron (NM_001083628, intron 4 of 32) intron (NM_001083628, intron 4 of 32) 141773 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_81_49_0.427103377825714_5.85740787868758_0.910002444715788 chr11 99580459 99581582 + 0.910002444715788 NA promoter-TSS (NM_027157) promoter-TSS (NM_027157) -4 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding common_peak1_81_49_0.427103377825714_5.85740787868758_0.910002444715788-2 chr13 40731176 40731812 + 0.910002444715788 NA intron (NM_001301674, intron 2 of 7) CpG -1037 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak1_81_49_0.427103377825714_5.85740787868758_0.910002444715788-3 chr19 10113170 10113738 + 0.910002444715788 NA Intergenic Intergenic -11951 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak2_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-3 chrX 134540761 134541001 + 0.909929411522249 NA intron (NM_013898, intron 1 of 1) intron (NM_013898, intron 1 of 1) 789 NM_013898 30058 Mm.214504 NM_013898 ENSMUSG00000048007 Timm8a1 DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a translocase of inner mitochondrial membrane 8A1 protein-coding unique_peak2_4_5_-0.521155598602994_2.32438470141966_0.909929411522249 chr1 135639189 135639389 + 0.909929411522249 NA Intergenic MIRb|SINE|MIR 41513 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA unique_peak1_5_5_-0.259976895129417_2.45497405315645_0.909929411522249 chr13 95550378 95550571 + 0.909929411522249 NA Intergenic Intergenic -25234 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding unique_peak2_5_5_-0.259976895129417_2.45497405315645_0.909929411522249-2 chr2 59618541 59618761 + 0.909929411522249 NA intron (NM_198294, intron 1 of 26) intron (NM_198294, intron 1 of 26) 6609 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding unique_peak2_4_5_-0.521155598602994_2.32438470141966_0.909929411522249-2 chr10 93273501 93273727 + 0.909929411522249 NA intron (NM_001322265, intron 2 of 4) intron (NM_001322265, intron 2 of 4) 37545 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak2_4_5_-0.521155598602994_2.32438470141966_0.909929411522249-4 chr18 80549462 80549666 + 0.909929411522249 NA Intergenic Intergenic -5018 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-3 chr11 67473130 67473340 + 0.909929411522249 NA Intergenic ORR1F|LTR|ERVL-MaLR -59763 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_4_5_-0.521155598602994_2.32438470141966_0.909929411522249 chr8 106529502 106529746 + 0.909929411522249 NA intron (NM_007665, intron 2 of 15) B3A|SINE|B2 18772 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-6 chr2 170123265 170123454 + 0.909929411522249 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 7861 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding unique_peak2_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-2 chr5 136640431 136640707 + 0.909929411522249 NA Intergenic MTC|LTR|ERVL-MaLR -52577 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding unique_peak2_5_5_-0.259976895129417_2.45497405315645_0.909929411522249 chr15 6432180 6432381 + 0.909929411522249 NA intron (NM_001008702, intron 10 of 13) intron (NM_001008702, intron 10 of 13) -13053 NM_013485 12279 Mm.29095 NM_013485 ENSMUSG00000022149 C9 - complement component 9 protein-coding unique_peak2_4_5_-0.521155598602994_2.32438470141966_0.909929411522249-3 chr15 36825713 36825928 + 0.909929411522249 NA Intergenic Intergenic -28891 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-4 chr14 30979500 30979700 + 0.909929411522249 NA intron (NM_001308328, intron 10 of 13) intron (NM_001308328, intron 10 of 13) -21793 NM_001165930 76485 Mm.8766 NM_029626 ENSMUSG00000021916 Glt8d1 2410004H05Rik|5430414N14Rik|AI450005 glycosyltransferase 8 domain containing 1 protein-coding unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-7 chr5 140383476 140383678 + 0.909929411522249 NA intron (NM_172277, intron 1 of 10) intron (NM_172277, intron 1 of 10) 5731 NM_172277 231834 Mm.27098 NM_172277 ENSMUSG00000029560 Snx8 B130023O14Rik sorting nexin 8 protein-coding common_peak2_5_4_0.00305751070437665_2.32345685023955_0.909929411522249 chr19 38034247 38034487 + 0.909929411522249 NA intron (NM_001302140, intron 1 of 53) Lx5b|LINE|L1 9210 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak2_5_4_0.00305751070437665_2.32345685023955_0.909929411522249 chr3 21412092 21412308 + 0.909929411522249 NA Intergenic Intergenic -664452 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249 chr10 93488640 93488867 + 0.909929411522249 NA promoter-TSS (NM_010401) promoter-TSS (NM_010401) -15 NM_010401 15109 Mm.13000 NM_010401 ENSMUSG00000020017 Hal Hsd|his|histidase histidine ammonia lyase protein-coding unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-2 chr11 16878999 16879247 + 0.909929411522249 NA intron (NM_207655, intron 13 of 27) intron (NM_207655, intron 13 of 27) 72159 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA unique_peak1_5_4_0.00305751070437665_2.32345685023955_0.909929411522249-5 chr15 99028538 99028748 + 0.909929411522249 NA Intergenic RSINE1|SINE|B4 -1248 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak2_110_115_-0.353239631415919_6.68136117941961_0.909580048283318 chr16 45944486 45945760 + 0.909580048283318 NA promoter-TSS (NR_152227) promoter-TSS (NR_152227) -483 NR_152226 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak1_175_117_0.282422394088731_7.02385424640621_0.908631134688596 chr15 95804506 95805827 + 0.908631134688596 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 14323 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak2_65_38_0.474608785962266_5.52270661184338_0.908349182838243 chr3 90433082 90433424 + 0.908349182838243 NA 5' UTR (NM_145540, exon 1 of 30) 5' UTR (NM_145540, exon 1 of 30) 383 NM_145540 229543 Mm.268564 NM_145540 ENSMUSG00000027933 Ints3 C77668 integrator complex subunit 3 protein-coding common_peak1_65_38_0.474608785962266_5.52270661184338_0.908349182838243-2 chr17 84152223 84153036 + 0.908349182838243 NA Intergenic Intergenic 35318 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_45_54_-0.538506411728405_5.51210650766046_0.908349182838243 chr5 103364178 103364944 + 0.908349182838243 NA Intergenic Intergenic 17963 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak1_65_38_0.474608785962266_5.52270661184338_0.908349182838243-3 chr3 54692816 54693582 + 0.908349182838243 NA promoter-TSS (NM_019995) promoter-TSS (NM_019995) 94 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak1_65_38_0.474608785962266_5.52270661184338_0.908349182838243-4 chr3 87908296 87909370 + 0.908349182838243 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 1983 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak1_65_38_0.474608785962266_5.52270661184338_0.908349182838243 chr12 113013359 113014331 + 0.908349182838243 NA promoter-TSS (NM_001291444) promoter-TSS (NM_001291444) -663 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak1_65_38_0.474608785962266_5.52270661184338_0.908349182838243-5 chr7 128309828 128310401 + 0.908349182838243 NA Intergenic Intergenic -11983 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_925_812_-0.12350909144493_9.60535699635256_0.908331980253977 chr15 66891145 66895577 + 0.908331980253977 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 1968 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-6 chr6 145441712 145442024 + 0.90781512069806 NA Intergenic Intergenic -6943 NM_028742 74071 Mm.441497 NM_028742 ENSMUSG00000054966 Lmntd1 4933403M22Rik|AI482300|Ifltd1|Lmna-rs1|Lmna1 lamin tail domain containing 1 protein-coding common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806 chr13 55482803 55483213 + 0.90781512069806 NA intron (NM_001177371, intron 2 of 14) intron (NM_001177371, intron 2 of 14) 5068 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding unique_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-2 chr8 111059317 111059863 + 0.90781512069806 NA Intergenic Intergenic 3251 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-4 chr4 59374672 59375239 + 0.90781512069806 NA intron (NM_001163288, intron 8 of 16) intron (NM_001163288, intron 8 of 16) 63678 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding unique_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806 chr1 162209305 162210069 + 0.90781512069806 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -7936 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-3 chr2 158140360 158140710 + 0.90781512069806 NA intron (NM_009373, intron 2 of 12) intron (NM_009373, intron 2 of 12) 5857 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_38_20_0.614056353903808_4.69934559973066_0.90781512069806-2 chr11 62077550 62077857 + 0.90781512069806 NA intron (NM_001029936, intron 1 of 12) intron (NM_001029936, intron 1 of 12) 679 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-7 chr7 55638726 55639136 + 0.90781512069806 NA Intergenic Intergenic -129253 NM_001310740 233274 Mm.44425 NM_178706 ENSMUSG00000051504 Siglech 6430529G09Rik|Siglec-H sialic acid binding Ig-like lectin H protein-coding common_peak2_38_20_0.614056353903808_4.69934559973066_0.90781512069806 chr1 105989890 105990219 + 0.90781512069806 NA promoter-TSS (NM_001122676) promoter-TSS (NM_001122676) 228 NR_151625 635504 Mm.359717 NR_151625 Gm7160 EG635504 predicted gene 7160 ncRNA common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-5 chr6 134566309 134566596 + 0.90781512069806 NA intron (NM_008514, intron 1 of 22) intron (NM_008514, intron 1 of 22) 461 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-8 chr8 94705685 94706152 + 0.90781512069806 NA Intergenic Intergenic -9676 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak2_38_20_0.614056353903808_4.69934559973066_0.90781512069806-3 chr7 55638762 55639151 + 0.90781512069806 NA Intergenic Intergenic -129228 NM_001310740 233274 Mm.44425 NM_178706 ENSMUSG00000051504 Siglech 6430529G09Rik|Siglec-H sialic acid binding Ig-like lectin H protein-coding common_peak1_38_20_0.614056353903808_4.69934559973066_0.90781512069806-2 chr15 81928399 81928732 + 0.90781512069806 NA Intergenic Intergenic -2352 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding unique_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057 chr11 4188100 4188689 + 0.907815120698057 NA intron (NM_134023, intron 1 of 8) intron (NM_134023, intron 1 of 8) 1561 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding common_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057-5 chr7 143986687 143987052 + 0.907815120698057 NA Intergenic Intergenic -22385 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057 chr10 7792513 7792765 + 0.907815120698057 NA promoter-TSS (NM_026141) promoter-TSS (NM_026141) -255 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding common_peak1_23_32_-0.733518472913204_4.67763488290185_0.907815120698057-2 chr6 91369808 91370338 + 0.907815120698057 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 41296 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding common_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057-6 chr8 105859612 105860211 + 0.907815120698057 NA promoter-TSS (NM_001357229) promoter-TSS (NM_001357229) -622 NM_026532 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding common_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057-2 chr13 63245115 63245586 + 0.907815120698057 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 5321 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057-3 chr2 135659058 135659380 + 0.907815120698057 NA promoter-TSS (NM_013829) promoter-TSS (NM_013829) -328 NM_001355155 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_23_32_-0.733518472913204_4.67763488290185_0.907815120698057-4 chr4 83327504 83328372 + 0.907815120698057 NA Intergenic Intergenic -3749 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_23_32_-0.733518472913204_4.67763488290185_0.907815120698057 chr17 85090213 85090520 + 0.907815120698057 NA promoter-TSS (NM_001163624) promoter-TSS (NM_001163624) -92 NM_001163624 213760 Mm.259035 NM_145984 ENSMUSG00000024127 Prepl 2810457N15Rik|9530014L06Rik|D030028O16Rik|mKIAA0436 prolyl endopeptidase-like protein-coding common_peak2_39_48_-0.572067880716778_5.32867590375682_0.907712525274296-2 chr2 35432412 35432984 + 0.907712525274296 NA intron (NM_010283, intron 1 of 8) intron (NM_010283, intron 1 of 8) 28751 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_39_48_-0.572067880716778_5.32867590375682_0.907712525274296-3 chr4 58183720 58184430 + 0.907712525274296 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 22521 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_57_33_0.487450180126928_5.3311879313138_0.907712525274296 chr2 30772073 30773025 + 0.907712525274296 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 29188 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding common_peak2_57_33_0.487450180126928_5.3311879313138_0.907712525274296 chr1 58504341 58504857 + 0.907712525274296 NA intron (NM_008765, intron 1 of 17) CpG 510 NM_001271526 18393 Mm.3411 NM_008765 ENSMUSG00000026037 Orc2 AU041563|Orc2l origin recognition complex, subunit 2 protein-coding common_peak2_39_48_-0.572067880716778_5.32867590375682_0.907712525274296-3 chr2 117649832 117650843 + 0.907712525274296 NA Intergenic Intergenic 162465 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_58_33_0.511938244072341_5.34343196328651_0.907712525274296 chr19 5744003 5744473 + 0.907712525274296 NA intron (NM_008520, intron 2 of 27) intron (NM_008520, intron 2 of 27) 3334 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak1_57_33_0.487450180126928_5.3311879313138_0.907712525274296-5 chr6 146964587 146965401 + 0.907712525274296 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -10573 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak1_58_33_0.511938244072341_5.34343196328651_0.907712525274296-3 chr19 18345083 18345885 + 0.907712525274296 NA Intergenic Intergenic 286329 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_57_33_0.487450180126928_5.3311879313138_0.907712525274296-4 chr5 23783019 23783549 + 0.907712525274296 NA intron (NM_178403, intron 1 of 15) CpG 427 NM_001289780 78697 Mm.58660 NM_178403 ENSMUSG00000057541 Pus7 C330017I15Rik pseudouridylate synthase 7 protein-coding common_peak2_57_33_0.487450180126928_5.3311879313138_0.907712525274296-2 chr10 118868057 118868516 + 0.907712525274296 NA exon (NM_001014390, exon 2 of 3) exon (NM_001014390, exon 2 of 3) 617 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_39_48_-0.572067880716778_5.32867590375682_0.907712525274296 chr10 111509550 111509936 + 0.907712525274296 NA Intergenic Intergenic 3457 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_58_33_0.511938244072341_5.34343196328651_0.907712525274296-2 chr14 37134479 37135051 + 0.907712525274296 NA intron (NM_078478, intron 1 of 8) intron (NM_078478, intron 1 of 8) 374 NM_001199122 66092 Mm.182912 NM_078478 ENSMUSG00000041028 Ghitm 1010001P14Rik|C77840|MICS1|PTD010|Tmbim5 growth hormone inducible transmembrane protein protein-coding common_peak1_57_33_0.487450180126928_5.3311879313138_0.907712525274296 chr1 58741640 58742197 + 0.907712525274296 NA intron (NM_001355056, intron 7 of 8) intron (NM_001355056, intron 7 of 8) 11366 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_57_33_0.487450180126928_5.3311879313138_0.907712525274296-3 chr14 54577650 54578184 + 0.907712525274296 NA promoter-TSS (NM_010590) promoter-TSS (NM_010590) -256 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_58_33_0.511938244072341_5.34343196328651_0.907712525274296-4 chr9 65826834 65827722 + 0.907712525274296 NA intron (NM_172536, intron 1 of 9) C-rich|Low_complexity|Low_complexity 286 NM_172536 214812 Mm.139231 NM_172536 ENSMUSG00000040524 Zfp609 9830165N24|BC016271|Znf609|mKIAA0295 zinc finger protein 609 protein-coding common_peak1_57_33_0.487450180126928_5.3311879313138_0.907712525274296-2 chr11 116108416 116109149 + 0.907712525274296 NA intron (NM_001205081, intron 1 of 5) intron (NM_001205081, intron 1 of 5) 1453 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_39_48_-0.572067880716778_5.32867590375682_0.907712525274296-2 chr11 87109227 87109764 + 0.907712525274296 NA promoter-TSS (NM_175563) promoter-TSS (NM_175563) 234 NM_025377 66140 Mm.45008 NM_025377 ENSMUSG00000020492 Ska2 1110001A07Rik|C78640|Fam33a spindle and kinetochore associated complex subunit 2 protein-coding common_peak2_39_48_-0.572067880716778_5.32867590375682_0.907712525274296 chr10 27653272 27653663 + 0.907712525274296 NA Intergenic Intergenic -36525 NM_008481 16773 Mm.256087 NM_008481 ENSMUSG00000019899 Lama2 5830440B04|dy|mKIAA4087|mer|merosin laminin, alpha 2 protein-coding unique_peak1_58_33_0.511938244072341_5.34343196328651_0.907712525274296 chr9 21320824 21321586 + 0.907712525274296 NA intron (NM_001359227, intron 1 of 22) CpG 486 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak2_57_33_0.487450180126928_5.3311879313138_0.907712525274296-4 chr2 91070752 91071358 + 0.907712525274296 NA promoter-TSS (NM_026721) promoter-TSS (NM_026721) -740 NM_001290765 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_57_33_0.487450180126928_5.3311879313138_0.907712525274296-3 chr2 165034036 165034779 + 0.907712525274296 NA intron (NM_144892, intron 1 of 7) CpG 372 NM_144892 228869 Mm.233080 NM_144892 ENSMUSG00000039804 Ncoa5 CIA nuclear receptor coactivator 5 protein-coding common_peak1_58_33_0.511938244072341_5.34343196328651_0.907712525274296 chr14 30625671 30626234 + 0.907712525274296 NA intron (NM_011103, intron 1 of 17) CpG 256 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak2_44_24_0.56751195765186_4.92761216860065_0.907273387067398-4 chr7 99858332 99858930 + 0.907273387067398 NA promoter-TSS (NM_001164258) promoter-TSS (NM_001164258) 252 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398 chr14 42130374 42131159 + 0.907273387067398 NA Intergenic Intergenic -35489 NR_073362 73553 Mm.243777 NM_028570 ENSMUSG00000090462 1700091H14Rik 100041930|Gm3578 RIKEN cDNA 1700091H14 gene ncRNA unique_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-4 chr8 12997198 12997723 + 0.907273387067398 NA intron (NM_001159486, intron 7 of 29) intron (NM_001159486, intron 7 of 29) -28574 NM_010172 14068 Mm.4827 NM_010172 ENSMUSG00000031443 F7 AI132620|Cf7|FVII coagulation factor VII protein-coding common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-7 chr8 36175801 36176288 + 0.907273387067398 NA Intergenic Intergenic 20034 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-3 chr3 119497865 119498524 + 0.907273387067398 NA Intergenic Intergenic 285194 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_44_24_0.56751195765186_4.92761216860065_0.907273387067398 chr11 3203032 3203373 + 0.907273387067398 NA 5' UTR (NM_001166549, exon 1 of 18) 5' UTR (NM_001166549, exon 1 of 18) 183 NM_001166549 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-6 chr8 11632801 11633346 + 0.907273387067398 NA intron (NM_001167967, intron 1 of 4) intron (NM_001167967, intron 1 of 4) 1963 NR_030781 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-3 chr2 180042648 180043128 + 0.907273387067398 NA promoter-TSS (NM_011969) promoter-TSS (NM_011969) 405 NM_178750 269397 Mm.63068 NM_178750 ENSMUSG00000039086 Ss18l1 A230053O16Rik|CREST SS18, nBAF chromatin remodeling complex subunit like 1 protein-coding common_peak2_44_24_0.56751195765186_4.92761216860065_0.907273387067398-5 chr8 36175788 36176287 + 0.907273387067398 NA Intergenic Intergenic 20027 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-5 chr4 136021178 136021627 + 0.907273387067398 NA intron (NM_013736, intron 1 of 10) CpG 247 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-2 chr2 122737933 122738313 + 0.907273387067398 NA promoter-TSS (NM_019788) promoter-TSS (NM_019788) -382 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding unique_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-2 chr11 88584758 88585755 + 0.907273387067398 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -33995 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-8 chr9 54586541 54587026 + 0.907273387067398 NA intron (NM_029573, intron 1 of 10) CpG 272 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak2_44_24_0.56751195765186_4.92761216860065_0.907273387067398-3 chr3 21988120 21988528 + 0.907273387067398 NA Intergenic Intergenic -88328 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_44_24_0.56751195765186_4.92761216860065_0.907273387067398-2 chr14 52104513 52104847 + 0.907273387067398 NA promoter-TSS (NM_001360176) promoter-TSS (NM_001360176) -659 NM_001360180 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding unique_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398 chr11 76120006 76120915 + 0.907273387067398 NA intron (NM_026664, intron 8 of 21) intron (NM_026664, intron 8 of 21) 59170 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_44_24_0.56751195765186_4.92761216860065_0.907273387067398-4 chr2 180966353 180967012 + 0.907273387067398 NA promoter-TSS (NM_001177708) promoter-TSS (NM_001177708) -543 NM_145760 228998 Mm.33765 NM_145760 ENSMUSG00000027575 Arfgap1 AI115377|Arf1gap ADP-ribosylation factor GTPase activating protein 1 protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392 chr10 7212045 7212525 + 0.907273387067392 NA promoter-TSS (NM_172546) promoter-TSS (NM_172546) -48 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-4 chr13 70903246 70903770 + 0.907273387067392 NA Intergenic Intergenic 20560 NM_029873 77166 Mm.159859 NM_029873 ENSMUSG00000021600 8030423J24Rik - RIKEN cDNA 8030423J24 gene protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-5 chr14 30654399 30654717 + 0.907273387067392 NA intron (NM_177815, intron 1 of 12) CpG 183 NM_177815 328370 Mm.259657 NM_177815 ENSMUSG00000052395 Rft1 D930025H04 RFT1 homolog protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-8 chr8 109765657 109766284 + 0.907273387067392 NA Intergenic Intergenic -12613 NM_009677 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-2 chr11 97419877 97420253 + 0.907273387067392 NA Intergenic Intergenic -30095 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-7 chr7 102441883 102442512 + 0.907273387067392 NA intron (NM_009103, intron 1 of 18) intron (NM_009103, intron 1 of 18) 502 NM_009103 20133 Mm.197486 NM_009103 ENSMUSG00000030978 Rrm1 RnrM1 ribonucleotide reductase M1 protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-3 chr11 98863774 98864397 + 0.907273387067392 NA intron (NM_197940, intron 1 of 7) intron (NM_197940, intron 1 of 7) 487 NM_197940 68524 Mm.28661 NM_197940 ENSMUSG00000038013 Wipf2 1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire WAS/WASL interacting protein family, member 2 protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-6 chr6 113689717 113690252 + 0.907273387067392 NA intron (NM_001113553, intron 10 of 11) B1F|SINE|Alu -7066 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_28_37_-0.665959512493075_4.91494775719705_0.907273387067392-9 chr9 118980297 118981165 + 0.907273387067392 NA intron (NM_133710, intron 1 of 7) intron (NM_133710, intron 1 of 7) -51065 NR_029742 387218 NR_029742 ENSMUSG00000065513 Mir26a-1 Mirn26a|Mirn26a-1|miR-26a|mir-26a-1 microRNA 26a-1 ncRNA common_peak1_92_98_-0.378071478299373_6.44032088092992_0.906668471228953 chr8 95011543 95012513 + 0.906668471228953 NA intron (NM_018882, intron 13 of 13) intron (NM_018882, intron 13 of 13) -5664 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak2_92_98_-0.378071478299373_6.44032088092992_0.906668471228953 chr9 106885780 106887071 + 0.906668471228953 NA TTS (NM_029103) TTS (NM_029103) 575 NM_175402 109095 Mm.431589 NM_175402 ENSMUSG00000074102 Rbm15b 1810017N16Rik RNA binding motif protein 15B protein-coding common_peak2_74_82_-0.431904966967162_6.15908694786334_0.906171153917818 chr1 151092207 151093687 + 0.906171153917818 NA Intergenic Intergenic -45087 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak2_75_82_-0.412930956375022_6.16857395315941_0.906171153917818 chr16 94370340 94371402 + 0.906171153917818 NA promoter-TSS (NM_001159620) promoter-TSS (NM_001159620) 132 NM_009441 22129 Mm.213408 NM_009441 ENSMUSG00000040785 Ttc3 2610202A04Rik|AA409221|D16Ium21|D16Ium21e|TPRD|mKIAA4119 tetratricopeptide repeat domain 3 protein-coding common_peak2_75_82_-0.412930956375022_6.16857395315941_0.906171153917818-2 chr3 98416647 98417526 + 0.906171153917818 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 34605 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_99_62_0.377963959079147_6.16626190303949_0.906171153917805 chr4 57783073 57783997 + 0.906171153917805 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -61713 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak1_99_62_0.377963959079147_6.16626190303949_0.906171153917805 chr5 91517744 91519132 + 0.906171153917805 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 738 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak2_205_200_-0.260519305693945_7.52079203833196_0.906029590895786 chr2 173266690 173268393 + 0.906029590895786 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 8992 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_121_125_-0.337178833770285_6.80869050661477_0.905464071010317 chr19 8820002 8820946 + 0.905464071010317 NA exon (NM_001081196, exon 1 of 14) exon (NM_001081196, exon 1 of 14) 1073 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak1_83_90_-0.40231492375256_6.30663717832242_0.905069649695056 chr7 63937896 63938859 + 0.905069649695056 NA exon (NM_021366, exon 1 of 2) exon (NM_021366, exon 1 of 2) 538 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_83_90_-0.40231492375256_6.30663717832242_0.905069649695056 chr2 180710234 180711006 + 0.905069649695056 NA promoter-TSS (NM_177852) promoter-TSS (NM_177852) 292 NM_001289651 76425 Mm.41464 NM_029607 ENSMUSG00000027573 Gid8 2310003C23Rik|4833420G11Rik|AI451474|Twa1 GID complex subunit 8 protein-coding common_peak2_177_118_0.28643448351874_7.03803500506731_0.903994188678805 chr12 35046718 35048111 + 0.903994188678805 NA intron (NM_001014973, intron 1 of 25) CpG 225 NM_001014973 217463 Mm.213991 NM_001014973 ENSMUSG00000020590 Snx13 Rgs-px1|mKIAA0713 sorting nexin 13 protein-coding common_peak1_177_118_0.28643448351874_7.03803500506731_0.903994188678805 chr1 63112897 63114915 + 0.903994188678805 NA promoter-TSS (NR_045915) promoter-TSS (NR_045915) 361 NM_001081436 227195 Mm.74718 NM_001081436 ENSMUSG00000040865 Ino80d 7330405I11|A430093A21Rik|BC010584 INO80 complex subunit D protein-coding common_peak1_102_107_-0.357300137105241_6.57623743361085_0.903910264683855 chr11 116671795 116673267 + 0.903910264683855 NA promoter-TSS (NR_028569) promoter-TSS (NR_028569) 26 NR_028569 100216536 NR_028569 ENSMUSG00000065640 Snord1c - small nucleolar RNA, C/D box 1C snoRNA common_peak1_130_84_0.332671372304689_6.57572662229005_0.903910264683855 chr6 86404223 86404863 + 0.903910264683855 NA intron (NM_001164078, intron 1 of 11) CpG 324 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding common_peak2_102_107_-0.357300137105241_6.57623743361085_0.903910264683855 chr16 65819240 65821048 + 0.903910264683855 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 4511 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak1_132_135_-0.323695316704306_6.92561518289819_0.903778333379131 chr8 110940725 110941690 + 0.903778333379131 NA intron (NM_009179, intron 1 of 6) B1F2|SINE|Alu 21342 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak2_133_135_-0.312964803183196_6.93098043965874_0.903778333379131 chr15 74708678 74709838 + 0.903778333379131 NA promoter-TSS (NM_008415) promoter-TSS (NM_008415) 64 NM_008415 16469 Mm.87052 NM_008415 ENSMUSG00000046380 Jrk - jerky protein-coding common_peak1_141_92_0.318406951025457_6.69836228662076_0.903702287631307 chr1 40266664 40268091 + 0.903702287631307 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 791 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_193_189_-0.265300033493114_7.43720559158439_0.903211466174145 chr15 85572818 85574620 + 0.903211466174145 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 4351 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_231_158_0.247920106946423_7.43684300875757_0.903211466174145 chr3 61364607 61366725 + 0.903211466174145 NA 3' UTR (NM_028712, exon 1 of 1) 3' UTR (NM_028712, exon 1 of 1) 1159 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak1_3_1_0.744150003364284_1.37207500168214_0.903089986991944 chr11 103015990 103016190 + 0.903089986991944 NA intron (NM_026551, intron 1 of 4) RCHARR1|DNA|hAT-Charlie 1057 NM_026551 68087 Mm.277449 NM_026551 ENSMUSG00000020935 Dcakd 3010024O21Rik|6720485C15Rik|AI849483 dephospho-CoA kinase domain containing protein-coding unique_peak1_3_1_0.744150003364284_1.37207500168214_0.903089986991944-2 chr13 99388951 99389224 + 0.903089986991944 NA intron (NM_173757, intron 4 of 10) RMER17B|LTR|ERVK 23739 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA unique_peak1_2_1_0.332040585164983_1.16602029258249_0.903089986991944 chr8 126862319 126862514 + 0.903089986991944 NA Intergenic ORR1E|LTR|ERVL-MaLR 13396 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_1_0_0.751204982937528_0.375602491468764_0.903089986991944 chr8 18618911 18619100 + 0.903089986991944 NA intron (NM_173189, intron 3 of 13) MTE2a|LTR|ERVL-MaLR 23874 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding common_peak2_277_192_0.227465034541761_7.70618955453896_0.902225559637486 chr4 155217658 155220531 + 0.902225559637486 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 3441 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_439_313_0.183046613739577_8.38614405576142_0.901601238575517 chr15 83563606 83566422 + 0.901601238575517 NA intron (NM_009775, intron 1 of 3) B2_Mm2|SINE|B2 1441 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak1_91_56_0.40290830805827_6.03434416819388_0.901543963465162 chr1 184034890 184035878 + 0.901543963465162 NA intron (NM_022019, intron 1 of 3) intron (NM_022019, intron 1 of 3) 1003 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_67_75_-0.445151635680378_6.0253516956034_0.901543963465162-2 chr8 111094260 111095028 + 0.901543963465162 NA promoter-TSS (NM_198308) promoter-TSS (NM_198308) -101 NM_198308 319518 Mm.28350 NM_198308 ENSMUSG00000033624 Pdpr 4930402E16Rik|AU018056|mKIAA1990 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding common_peak2_91_56_0.40290830805827_6.03434416819388_0.901543963465162 chr16 33877590 33878716 + 0.901543963465162 NA intron (NM_001145884, intron 4 of 14) intron (NM_001145884, intron 4 of 14) 48488 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_67_75_-0.445151635680378_6.0253516956034_0.901543963465162 chr15 82127420 82128481 + 0.901543963465162 NA promoter-TSS (NM_172428) promoter-TSS (NM_172428) -25 NR_137170 76457 Mm.440373 NM_172428 ENSMUSG00000068114 Ccdc134 2310042L06Rik|AW208859 coiled-coil domain containing 134 protein-coding common_peak2_90_56_0.387252230291257_6.02651612931037_0.901543963465162 chr18 35841973 35842657 + 0.901543963465162 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 12001 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_190_128_0.271002929523763_7.14672872018514_0.901453649099037 chr15 85580129 85581808 + 0.901453649099037 NA promoter-TSS (NR_040433) promoter-TSS (NR_040433) -174 NR_040433 105975 Mm.394884 NR_040433 ENSMUSG00000097209 AU022754 - expressed sequence AU022754 ncRNA common_peak1_218_148_0.259027537757976_7.34868228934115_0.901365249410448 chr4 95050416 95051970 + 0.901365249410448 NA exon (NM_010591, exon 1 of 1) exon (NM_010591, exon 1 of 1) 1029 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_52_61_-0.508426255117015_5.69998318282837_0.901340839087553-4 chr8 103221012 103221831 + 0.901340839087553 NA Intergenic Intergenic 126113 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_53_61_-0.481649459486715_5.71337158064352_0.901340839087553-4 chr2 3512088 3512797 + 0.901340839087553 NA promoter-TSS (NM_177647) promoter-TSS (NM_177647) 372 NR_103465 50497 Mm.89341 NM_015765 ENSMUSG00000051396 Hspa14 70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1 heat shock protein 14 protein-coding common_peak2_53_61_-0.481649459486715_5.71337158064352_0.901340839087553 chr1 192770347 192771262 + 0.901340839087553 NA intron (NM_144881, intron 1 of 11) CpG 415 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_73_44_0.432052665154523_5.70787942890694_0.901340839087553-2 chr2 173276675 173277146 + 0.901340839087553 NA promoter-TSS (NM_022995) promoter-TSS (NM_022995) -377 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_73_44_0.432052665154523_5.70787942890694_0.901340839087553-4 chr5 32746104 32746811 + 0.901340839087553 NA promoter-TSS (NM_001347332) promoter-TSS (NM_001347332) -115 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak2_52_61_-0.508426255117015_5.69998318282837_0.901340839087553-3 chr8 70540807 70541275 + 0.901340839087553 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 1366 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak2_53_61_-0.481649459486715_5.71337158064352_0.901340839087553-3 chr17 23771067 23771607 + 0.901340839087553 NA intron (NM_001357993, intron 1 of 8) CpG 254 NM_153791 224613 Mm.328835 NM_153791 ENSMUSG00000040097 Flywch1 E030034P13Rik|mKIAA1552 FLYWCH-type zinc finger 1 protein-coding common_peak2_52_61_-0.508426255117015_5.69998318282837_0.901340839087553-2 chr6 91204776 91205744 + 0.901340839087553 NA Intergenic Intergenic -7504 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_52_61_-0.508426255117015_5.69998318282837_0.901340839087553 chr15 102018110 102018732 + 0.901340839087553 NA Intergenic Intergenic -9795 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak1_73_44_0.432052665154523_5.70787942890694_0.901340839087553 chr11 117268958 117269712 + 0.901340839087553 NA intron (NM_001113487, intron 1 of 10) intron (NM_001113487, intron 1 of 10) 3089 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_73_44_0.432052665154523_5.70787942890694_0.901340839087553-2 chr18 10609230 10610055 + 0.901340839087553 NA intron (NM_001081222, intron 1 of 10) CpG 710 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak2_53_61_-0.481649459486715_5.71337158064352_0.901340839087553-5 chr9 96719411 96720336 + 0.901340839087553 NA promoter-TSS (NM_001359960) promoter-TSS (NM_001359960) -23 NM_001359959 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_53_61_-0.481649459486715_5.71337158064352_0.901340839087553-2 chr15 80948306 80948863 + 0.901340839087553 NA promoter-TSS (NM_009634) promoter-TSS (NM_009634) 94 NM_009634 11564 Mm.38151 NM_009634 ENSMUSG00000022407 Adsl Adl|Asl adenylosuccinate lyase protein-coding common_peak1_52_61_-0.508426255117015_5.69998318282837_0.901340839087553 chr6 85295218 85295790 + 0.901340839087553 NA intron (NM_178639, intron 3 of 13) intron (NM_178639, intron 3 of 13) 37918 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding common_peak1_73_44_0.432052665154523_5.70787942890694_0.901340839087553-3 chr2 69789631 69790228 + 0.901340839087553 NA promoter-TSS (NM_001077684) promoter-TSS (NM_001077684) 192 NM_028521 73373 Mm.9621 NM_028521 ENSMUSG00000027088 Phospho2 1700048E23Rik|AI661517|AU021728|AV006103|Phos2 phosphatase, orphan 2 protein-coding common_peak1_53_61_-0.481649459486715_5.71337158064352_0.901340839087553 chr13 31558519 31559421 + 0.901340839087553 NA exon (NM_008239, exon 1 of 1) exon (NM_008239, exon 1 of 1) 800 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding common_peak2_73_44_0.432052665154523_5.70787942890694_0.901340839087553-3 chr7 19359518 19360127 + 0.901340839087553 NA promoter-TSS (NM_145822) promoter-TSS (NM_145822) -339 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding common_peak2_73_44_0.432052665154523_5.70787942890694_0.901340839087553 chr15 81360052 81360708 + 0.901340839087553 NA intron (NM_011399, intron 1 of 8) intron (NM_011399, intron 1 of 8) 385 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding common_peak1_590_428_0.155485147229339_8.82257641111421_0.900526690268884 chr15 102974842 102979238 + 0.900526690268884 NA promoter-TSS (NM_008272) promoter-TSS (NM_008272) 8 NM_008272 15427 Mm.4765 NM_008272 ENSMUSG00000036139 Hoxc9 Hox-3.2 homeobox C9 protein-coding common_peak2_153_101_0.30135413062645_6.82310240728472_0.900116865408638 chr11 78362611 78363645 + 0.900116865408638 NA intron (NM_008238, intron 6 of 8) intron (NM_008238, intron 6 of 8) 16418 NM_001313987 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding common_peak2_122_126_-0.336889516944272_6.82023992830003_0.900116865408613 chr15 102954673 102956192 + 0.900116865408613 NA intron (NM_001024842, intron 1 of 1) intron (NM_001024842, intron 1 of 1) 906 NM_001024842 109663 Mm.37692 NM_001024842 ENSMUSG00000001656 Hoxc11 Hox-3.7 homeobox C11 protein-coding common_peak2_123_126_-0.325290126792628_6.82603962337585_0.900116865408613 chr2 164441561 164443087 + 0.900116865408613 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 864 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_232_159_0.245036339666965_7.44444626472085_0.899751421628896 chr3 53200775 53202931 + 0.899751421628896 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 160306 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_93_99_-0.377249866045914_6.45523125675177_0.89974980067288 chr17 46202799 46204044 + 0.89974980067288 NA promoter-TSS (NM_030715) promoter-TSS (NM_030715) 566 NM_028198 72322 Mm.275039 NM_028198 ENSMUSG00000067150 Xpo5 2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291 exportin 5 protein-coding common_peak1_82_50_0.415898278919423_5.88037448143121_0.899598902715962 chr6 4488773 4489695 + 0.899598902715962 NA Intergenic Intergenic -16384 NM_007743 12843 Mm.277792 NM_007743 ENSMUSG00000029661 Col1a2 AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim collagen, type I, alpha 2 protein-coding common_peak2_82_50_0.415898278919423_5.88037448143121_0.899598902715962 chr5 31240593 31241292 + 0.899598902715962 NA promoter-TSS (NM_001347326) promoter-TSS (NM_001347326) 24 NM_147201 192292 Mm.292040 NM_147201 ENSMUSG00000029148 Nrbp1 B230344L17Rik|Nrbp nuclear receptor binding protein 1 protein-coding common_peak1_82_50_0.415898278919423_5.88037448143121_0.899598902715962-2 chr8 111624520 111625565 + 0.899598902715962 NA 3' UTR (NM_001168623, exon 5 of 5) 3' UTR (NM_001168623, exon 5 of 5) 5280 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding unique_peak1_82_50_0.415898278919423_5.88037448143121_0.899598902715962 chr3 144199521 144200611 + 0.899598902715962 NA intron (NM_001161769, intron 2 of 4) intron (NM_001161769, intron 2 of 4) 2266 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_60_68_-0.461368387475293_5.87784026304052_0.89959890271595-3 chr7 99355375 99356541 + 0.89959890271595 NA Intergenic Intergenic -2719 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_60_68_-0.461368387475293_5.87784026304052_0.89959890271595-4 chr8 25993482 25994445 + 0.89959890271595 NA intron (NM_029037, intron 1 of 4) intron (NM_029037, intron 1 of 4) 158 NM_029037 74653 Mm.17631 NM_029037 ENSMUSG00000037251 Pomk 4930444A02Rik|Sgk196 protein-O-mannose kinase protein-coding common_peak2_60_68_-0.461368387475293_5.87784026304052_0.89959890271595 chr13 55714347 55715062 + 0.89959890271595 NA promoter-TSS (NM_175150) promoter-TSS (NM_175150) 54 NM_175150 69672 Mm.294457 NM_175150 ENSMUSG00000021497 Txndc15 2310047H23Rik|AI854086|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding common_peak2_60_68_-0.461368387475293_5.87784026304052_0.89959890271595-2 chr15 53688812 53689271 + 0.89959890271595 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -74762 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_60_68_-0.461368387475293_5.87784026304052_0.89959890271595-5 chr9 20492252 20493084 + 0.89959890271595 NA promoter-TSS (NM_001110309) promoter-TSS (NM_001110309) 78 NM_146221 235028 Mm.297660 NM_146221 ENSMUSG00000059475 Zfp426 2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237 zinc finger protein 426 protein-coding common_peak2_278_193_0.225152922247319_7.71248930331079_0.899356428757191 chr3 65957028 65958734 + 0.899356428757191 NA exon (NM_019937, exon 1 of 11) exon (NM_019937, exon 1 of 11) 368 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak2_236_227_-0.241541725235255_7.71211915154711_0.899356428757191 chr8 111734166 111736322 + 0.899356428757191 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) -3108 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_166_110_0.295456505676438_6.94214411918833_0.898859487326522 chr4 106315703 106317217 + 0.898859487326522 NA 5' UTR (NM_183225, exon 1 of 68) 5' UTR (NM_183225, exon 1 of 68) 247 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak2_113_117_-0.339698972162485_6.7127935632806_0.897937230793954 chr4 149978791 149979776 + 0.897937230793954 NA TTS (NM_173371) TTS (NM_173371) 23953 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_113_117_-0.339698972162485_6.7127935632806_0.897937230793954 chr7 132735077 132736171 + 0.897937230793954 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 41292 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_142_93_0.313029701583496_6.71110370246939_0.897937230793929 chr10 25789062 25790438 + 0.897937230793929 NA intron (NR_045349, intron 2 of 4) intron (NR_045349, intron 2 of 4) 47687 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA common_peak1_142_93_0.313029701583496_6.71110370246939_0.897937230793929-2 chr7 35055242 35056533 + 0.897937230793929 NA intron (NM_009884, intron 1 of 1) intron (NM_009884, intron 1 of 1) 679 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak1_100_63_0.369497899257413_6.18474894962871_0.897828700867235 chr13 51650928 51652384 + 0.897828700867235 NA promoter-TSS (NM_029279) promoter-TSS (NM_029279) -52 NM_001308448 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_100_63_0.369497899257413_6.18474894962871_0.897828700867235-2 chr9 51008102 51009042 + 0.897828700867235 NA intron (NM_178710, intron 1 of 15) CpG 501 NM_178710 235344 Mm.104932 NM_178710 ENSMUSG00000037112 Sik2 G630080D20Rik|Snf1lk2 salt inducible kinase 2 protein-coding common_peak2_84_91_-0.401129179539927_6.32299736628705_0.897522758654606 chr5 92809275 92810817 + 0.897522758654606 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 664 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_110_70_0.354994244206971_6.32724424160817_0.897522758654606 chr1 162243846 162244772 + 0.897522758654606 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 20941 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA common_peak1_110_70_0.354994244206971_6.32724424160817_0.897522758654606-2 chr11 96285204 96286489 + 0.897522758654606 NA promoter-TSS (NM_010460) promoter-TSS (NM_010460) -800 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak1_192_129_0.274784557441738_7.15976009174932_0.897241337509177 chr10 79852649 79854351 + 0.897241337509177 NA promoter-TSS (NM_008956) promoter-TSS (NM_008956) -932 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding common_peak2_34_43_-0.608075626091494_5.15539380559155_0.895935469411238-4 chr16 43889870 43890351 + 0.895935469411238 NA promoter-TSS (NM_001356328) promoter-TSS (NM_001356328) 208 NM_027801 212153 Mm.209835 NM_027801 ENSMUSG00000022701 Ccdc191 2610015P09Rik|8430422M09Rik|AU040712 coiled-coil domain containing 191 protein-coding common_peak2_51_29_0.51159259927335_5.16268689524519_0.895935469411238 chr1 74386636 74387084 + 0.895935469411238 NA TTS (NM_013612) TTS (NM_013612) -4749 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-2 chr10 24493841 24494350 + 0.895935469411238 NA Intergenic Intergenic -101347 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-6 chr8 4253528 4253993 + 0.895935469411238 NA intron (NM_133968, intron 1 of 4) intron (NM_133968, intron 1 of 4) 658 NM_133968 102209 Mm.28452 NM_133968 ENSMUSG00000011837 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 protein-coding common_peak2_34_43_-0.608075626091494_5.15539380559155_0.895935469411238-2 chr11 115403772 115404220 + 0.895935469411238 NA non-coding (NR_154991, exon 1 of 5) intron (NM_026729, intron 1 of 5) 244 NR_154991 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding unique_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-3 chr14 120372261 120373191 + 0.895935469411238 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 66274 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak2_51_29_0.51159259927335_5.16268689524519_0.895935469411238-2 chr1 105422927 105423505 + 0.895935469411238 NA Intergenic Intergenic -66506 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-7 chr8 109155704 109156427 + 0.895935469411238 NA intron (NR_151498, intron 1 of 4) intron (NR_151498, intron 1 of 4) 80843 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak1_34_43_-0.608075626091494_5.15539380559155_0.895935469411238 chr13 70903182 70903850 + 0.895935469411238 NA Intergenic Intergenic 20568 NM_029873 77166 Mm.159859 NM_029873 ENSMUSG00000021600 8030423J24Rik - RIKEN cDNA 8030423J24 gene protein-coding unique_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-2 chr12 73112210 73113121 + 0.895935469411238 NA exon (NM_011382, exon 1 of 3) exon (NM_011382, exon 1 of 3) 580 NM_011382 20474 Mm.249575 NM_011382 ENSMUSG00000034460 Six4 AI047561|AREC3|TrexBF sine oculis-related homeobox 4 protein-coding common_peak2_51_29_0.51159259927335_5.16268689524519_0.895935469411238-3 chr11 97041714 97042258 + 0.895935469411238 NA promoter-TSS (NM_027026) promoter-TSS (NM_027026) 426 NM_001357808 107732 Mm.208946 NM_026154 ENSMUSG00000001445 Mrpl10 0610040E02Rik|C78440|MRP-L8|Rpml8 mitochondrial ribosomal protein L10 protein-coding common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-4 chr15 102331487 102332012 + 0.895935469411238 NA promoter-TSS (NM_021713) promoter-TSS (NM_021713) 40 NM_021713 60315 Mm.251638 NM_021713 ENSMUSG00000001285 Myg1 0610023A07Rik|2810433J21Rik|5830429P19Rik|AI325965|Gamm1 melanocyte proliferating gene 1 protein-coding unique_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238 chr11 88164317 88165126 + 0.895935469411238 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -4844 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-5 chr3 144202048 144202827 + 0.895935469411238 NA promoter-TSS (NM_001161770) promoter-TSS (NM_001161770) -41 NM_001161769 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_34_43_-0.608075626091494_5.15539380559155_0.895935469411238-3 chr16 24913150 24913780 + 0.895935469411238 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -146174 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238 chr1 23202318 23202901 + 0.895935469411238 NA Intergenic Intergenic -69660 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA common_peak2_51_29_0.51159259927335_5.16268689524519_0.895935469411238-5 chr3 95819508 95819957 + 0.895935469411238 NA promoter-TSS (NM_001081293) promoter-TSS (NM_001081293) -779 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak1_51_29_0.51159259927335_5.16268689524519_0.895935469411238-3 chr11 116817160 116817615 + 0.895935469411238 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 10659 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak2_34_43_-0.608075626091494_5.15539380559155_0.895935469411238 chr11 102215868 102216564 + 0.895935469411238 NA intron (NM_001361596, intron 3 of 27) intron (NM_001361596, intron 3 of 27) 13934 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA common_peak2_51_29_0.51159259927335_5.16268689524519_0.895935469411238-4 chr2 26506736 26507303 + 0.895935469411238 NA Intergenic Intergenic 3092 NR_132655 102639736 NR_132655 Gm35978 - predicted gene, 35978 ncRNA unique_peak1_66_39_0.459624922753025_5.55174055626387_0.895298945923416 chr1 165461310 165462102 + 0.895298945923416 NA intron (NM_027430, intron 1 of 4) intron (NM_027430, intron 1 of 4) 498 NM_027430 70456 Mm.195625 NM_027430 ENSMUSG00000026568 Mpc2 0610006C01Rik|2010002I07Rik|2610205H19Rik|AA108335|Brp44|ESTM43 mitochondrial pyruvate carrier 2 protein-coding common_peak1_66_39_0.459624922753025_5.55174055626387_0.895298945923416-3 chr9 43115707 43116278 + 0.895298945923416 NA intron (NM_001034863, intron 1 of 2) intron (NM_001034863, intron 1 of 2) 578 NR_153341 235300 Mm.261326 NM_001034863 ENSMUSG00000048503 Tmem136 AA396355|Gm184 transmembrane protein 136 protein-coding unique_peak1_66_39_0.459624922753025_5.55174055626387_0.895298945923416-2 chr13 55727429 55728109 + 0.895298945923416 NA intron (NM_028281, intron 1 of 3) intron (NM_028281, intron 1 of 3) 401 NM_028281 72562 Mm.28145 NM_028281 ENSMUSG00000021496 Pcbd2 2700061N24Rik|Dcoh2|Dcohm pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 protein-coding common_peak1_66_39_0.459624922753025_5.55174055626387_0.895298945923416 chr2 132846707 132847378 + 0.895298945923416 NA promoter-TSS (NM_025646) promoter-TSS (NM_025646) 376 NM_001024385 66586 Mm.357342 NM_025646 ENSMUSG00000027357 Crls1 0610009I22Rik|4930557M15Rik|5730490M08Rik cardiolipin synthase 1 protein-coding common_peak2_66_39_0.459624922753025_5.55174055626387_0.895298945923416 chr11 97279733 97280451 + 0.895298945923416 NA intron (NM_008942, intron 1 of 22) CpG 484 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding common_peak2_46_55_-0.533693618755549_5.54050811267983_0.895298945923416-2 chr9 64960951 64961579 + 0.895298945923416 NA intron (NM_175153, intron 1 of 12) intron (NM_175153, intron 1 of 12) 335 NM_175153 69882 Mm.272616 NM_175153 ENSMUSG00000034263 Ints14 2010321M09Rik|Vwa9 integrator complex subunit 14 protein-coding common_peak2_46_55_-0.533693618755549_5.54050811267983_0.895298945923416 chr17 37002608 37003202 + 0.895298945923416 NA promoter-TSS (NR_033137) promoter-TSS (NR_033137) 380 NM_001013745 22715 Mm.305561 NM_009559 ENSMUSG00000036036 Zfp57 G19|Zfp-57 zinc finger protein 57 protein-coding common_peak1_66_39_0.459624922753025_5.55174055626387_0.895298945923416-2 chr5 151068891 151069525 + 0.895298945923416 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 116601 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding common_peak1_124_127_-0.325099218667057_6.83745039066647_0.894863628003375 chr4 40852440 40853909 + 0.894863628003375 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 1363 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak1_135_137_-0.312803558588206_6.95212267748407_0.894020421176341 chr19 18814644 18816151 + 0.894020421176341 NA exon (NM_153417, exon 17 of 39) exon (NM_153417, exon 17 of 39) 65414 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_158_158_-0.293332277360284_7.16621681660421_0.893087810919629 chr15 96698907 96699819 + 0.893087810919629 NA intron (NM_001355633, intron 1 of 14) CpG 365 NM_001355633 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_121_78_0.336320341552529_6.47194091895337_0.892987822727006 chr17 31657668 31658691 + 0.892987822727006 NA intron (NM_024187, intron 1 of 7) CpG 575 NM_024187 108121 Mm.379289 NM_024187 ENSMUSG00000061613 U2af1 2010107D16Rik U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 protein-coding common_peak2_94_100_-0.376446109026014_6.46998842823879_0.892987822727006 chr13 114679934 114681363 + 0.892987822727006 NA intron (NR_045976, intron 3 of 6) intron (NR_045976, intron 3 of 6) 73420 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA common_peak2_94_100_-0.376446109026014_6.46998842823879_0.892987822727006-3 chr9 20644082 20645508 + 0.892987822727006 NA promoter-TSS (NM_001286530) promoter-TSS (NM_001286530) -8 NM_001310746 66177 Mm.390165 NM_025401 ENSMUSG00000084786 Ubl5 1110030M22Rik|beacon ubiquitin-like 5 protein-coding common_peak2_94_100_-0.376446109026014_6.46998842823879_0.892987822727006-2 chr14 11553511 11554724 + 0.892987822727006 NA 5' UTR (NM_008981, exon 1 of 30) 5' UTR (NM_008981, exon 1 of 30) 564 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak2_59_34_0.494194548680919_5.37638029128543_0.89292906939411-3 chr4 155992140 155992603 + 0.89292906939411 NA promoter-TSS (NM_011341) promoter-TSS (NM_011341) 307 NM_080445 117592 Mm.440185 NM_080445 ENSMUSG00000050796 B3galt6 BB129894|GalTII UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 protein-coding common_peak1_59_34_0.494194548680919_5.37638029128543_0.89292906939411-3 chr9 25243782 25244521 + 0.89292906939411 NA Intergenic Intergenic -7840 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_59_34_0.494194548680919_5.37638029128543_0.89292906939411 chr7 6155938 6156809 + 0.89292906939411 NA promoter-TSS (NM_001013012) promoter-TSS (NM_001013012) -402 NM_001013012 67109 Mm.3254 NM_001013012 ENSMUSG00000046792 Zfp787 2210018M03Rik|Znf787 zinc finger protein 787 protein-coding common_peak2_59_34_0.494194548680919_5.37638029128543_0.89292906939411-2 chr4 155734019 155734626 + 0.89292906939411 NA promoter-TSS (NM_001101506) promoter-TSS (NM_001101506) -482 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding common_peak2_59_34_0.494194548680919_5.37638029128543_0.89292906939411 chr19 5489260 5489732 + 0.89292906939411 NA promoter-TSS (NM_007687) promoter-TSS (NM_007687) -959 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding common_peak1_59_34_0.494194548680919_5.37638029128543_0.89292906939411-2 chr7 90092094 90092996 + 0.89292906939411 NA Intergenic Intergenic 36929 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA unique_peak1_59_34_0.494194548680919_5.37638029128543_0.89292906939411 chr3 126693980 126695083 + 0.89292906939411 NA intron (NM_001025438, intron 3 of 18) intron (NM_001025438, intron 3 of 18) 97580 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_40_49_-0.565841642601042_5.3609353684742_0.892929069394104 chr1 135731329 135732085 + 0.892929069394104 NA intron (NM_007791, intron 1 of 5) intron (NM_007791, intron 1 of 5) 2540 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak1_40_49_-0.565841642601042_5.3609353684742_0.892929069394104-2 chr17 28800935 28801565 + 0.892929069394104 NA 5' UTR (NM_001081315, exon 1 of 13) 5' UTR (NM_001081315, exon 1 of 13) 124 NM_001081315 268936 Mm.291877 NM_199061 ENSMUSG00000063952 Brpf3 AI413466|AW493400|mKIAA1286 bromodomain and PHD finger containing, 3 protein-coding common_peak1_40_49_-0.565841642601042_5.3609353684742_0.892929069394104 chr16 23520182 23520843 + 0.892929069394104 NA intron (NM_001359083, intron 1 of 10) intron (NM_001359083, intron 1 of 10) 303 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding common_peak2_40_49_-0.565841642601042_5.3609353684742_0.892929069394104-2 chr9 88091248 88091811 + 0.892929069394104 NA Intergenic Intergenic -236080 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_69_76_-0.422485527722342_6.05554377683373_0.89245095702322 chrX 96121167 96121929 + 0.89245095702322 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 25503 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_92_57_0.393304146652665_6.0546330684539_0.892450957023207 chr1 43826994 43827782 + 0.892450957023207 NA intron (NM_026430, intron 1 of 14) CpG 320 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak1_92_57_0.393304146652665_6.0546330684539_0.892450957023207-2 chr6 137735116 137735679 + 0.892450957023207 NA exon (NM_011499, exon 1 of 10) exon (NM_011499, exon 1 of 10) 315 NM_011499 20901 Mm.22584 NM_011499 ENSMUSG00000030224 Strap AW557906|C78091|C79202|Unrip serine/threonine kinase receptor associated protein protein-coding common_peak1_114_118_-0.339362542331055_6.72513649214242_0.892281660027191 chr15 77888557 77889227 + 0.892281660027191 NA Intergenic B1_Mus2|SINE|Alu 40102 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_114_118_-0.339362542331055_6.72513649214242_0.892281660027191 chr7 110613969 110615336 + 0.892281660027191 NA intron (NM_177324, intron 1 of 40) CpG 268 NM_177324 319934 Mm.102970 NM_177324 ENSMUSG00000038371 Sbf2 4833411B01Rik|AA414977|AI317167|B430219L04Rik|Mtmr13|mMTMH1 SET binding factor 2 protein-coding common_peak1_132_86_0.320824028697305_6.60335551019738_0.891485016924033 chr2 26915552 26917164 + 0.891485016924033 NA promoter-TSS (NM_013678) promoter-TSS (NM_013678) -63 NM_013678 20931 Mm.389260 NM_013678 ENSMUSG00000014873 Surf2 Surf-2 surfeit gene 2 protein-coding common_peak2_132_86_0.320824028697305_6.60335551019738_0.891485016924033 chr3 98338505 98339827 + 0.891485016924033 NA intron (NM_016966, intron 1 of 11) GC_rich|Low_complexity|Low_complexity 803 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328 chr1 193406958 193407251 + 0.891319708951328 NA Intergenic Intergenic -36822 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-16 chr2 59617976 59618300 + 0.891319708951328 NA intron (NM_198294, intron 1 of 26) intron (NM_198294, intron 1 of 26) 6096 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-2 chr11 20586445 20586852 + 0.891319708951328 NA intron (NM_021372, intron 1 of 1) intron (NM_021372, intron 1 of 1) 43395 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-31 chr8 86879095 86879308 + 0.891319708951328 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 6057 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-7 chr13 32508919 32509183 + 0.891319708951328 NA Intergenic Intergenic -170507 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-3 chr7 29237826 29238060 + 0.891319708951328 NA promoter-TSS (NM_001110201) promoter-TSS (NM_001110201) 349 NM_001357668 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-10 chr17 34027603 34027887 + 0.891319708951328 NA TTS (NM_008202) TTS (NM_008202) 310 NM_013543 14979 Mm.275452 NM_013543 ENSMUSG00000073422 H2-Ke6 D17H6S112E|H-2Ke6|Hsd17b8|Ke-6|Ke6|Ring2 H2-K region expressed gene 6 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-27 chr7 131410755 131411018 + 0.891319708951328 NA promoter-TSS (NM_175115) promoter-TSS (NM_175115) 285 NM_025826 66885 Mm.334274 NM_025826 ENSMUSG00000030861 Acadsb 1300003O09Rik|2-MEBCAD|BB066609|SBCAD acyl-Coenzyme A dehydrogenase, short/branched chain protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-33 chr9 107697718 107698142 + 0.891319708951328 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 7661 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-14 chr18 24716425 24716823 + 0.891319708951328 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 8001 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-20 chr3 121675327 121675749 + 0.891319708951328 NA intron (NM_001033814, intron 3 of 5) intron (NM_001033814, intron 3 of 5) 4775 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-24 chr4 138077734 138077997 + 0.891319708951328 NA intron (NM_001256195, intron 4 of 34) intron (NM_001256195, intron 4 of 34) 60653 NR_126429 73563 Mm.444294 NR_126429 ENSMUSG00000084804 1700095J12Rik - RIKEN cDNA 1700095J12 gene ncRNA unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-9 chr13 107846807 107847216 + 0.891319708951328 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 43053 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-23 chr4 129325665 129326129 + 0.891319708951328 NA intron (NM_009030, intron 3 of 11) intron (NM_009030, intron 3 of 11) 9473 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4, chromatin remodeling factor protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-4 chr11 107575037 107575412 + 0.891319708951328 NA intron (NM_198298, intron 3 of 31) intron (NM_198298, intron 3 of 31) 27264 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-13 chr17 79709314 79709647 + 0.891319708951328 NA 3' UTR (NM_009994, exon 3 of 3) 3' UTR (NM_009994, exon 3 of 3) 5561 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-5 chr4 99929506 99929786 + 0.891319708951328 NA exon (NM_028132, exon 1 of 11) exon (NM_028132, exon 1 of 11) 195 NM_028132 72157 Mm.217764 NM_028132 ENSMUSG00000025791 Pgm2 2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1 phosphoglucomutase 2 protein-coding unique_peak1_9_16_-1.03071091870542_3.57210738189763_0.891319708951328 chr1 186583806 186584029 + 0.891319708951328 NA Intergenic Intergenic -25236 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-17 chr2 60864694 60865011 + 0.891319708951328 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 16586 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-6 chr12 81484362 81484756 + 0.891319708951328 NA intron (NM_001309847, intron 3 of 5) intron (NM_001309847, intron 3 of 5) 292 NR_132135 66272 Mm.439970 NM_025461 ENSMUSG00000091803 Cox16 1810020G14Rik|1810055I05Rik|BB388670 cytochrome c oxidase assembly protein 16 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-12 chr17 47596087 47596368 + 0.891319708951328 NA intron (NM_001081635, intron 4 of 6) intron (NM_001081635, intron 4 of 6) 2760 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-2 chr11 115834216 115834513 + 0.891319708951328 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 10306 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-28 chr8 22543118 22543383 + 0.891319708951328 NA intron (NM_011394, intron 4 of 10) intron (NM_011394, intron 4 of 10) 50563 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-11 chr17 37028719 37029092 + 0.891319708951328 NA Intergenic Intergenic -5507 NM_010814 17441 Mm.210857 NM_010814 ENSMUSG00000076439 Mog B230317G11Rik myelin oligodendrocyte glycoprotein protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-26 chr7 68139350 68139835 + 0.891319708951328 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 124641 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-32 chr8 91802246 91802445 + 0.891319708951328 NA promoter-TSS (NM_008393) promoter-TSS (NM_008393) -691 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-15 chr2 27474125 27474578 + 0.891319708951328 NA intron (NM_001113573, intron 1 of 11) intron (NM_001113573, intron 1 of 11) 1047 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-29 chr8 64206289 64206489 + 0.891319708951328 NA promoter-TSS (NM_009390) promoter-TSS (NM_009390) -381 NM_009390 21892 Mm.418367 NM_009390 ENSMUSG00000053626 Tll1 Tll|Tll-1|b2b2476Clo tolloid-like protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-21 chr4 84205611 84205840 + 0.891319708951328 NA Intergenic Intergenic -160846 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328 chr11 69578752 69578992 + 0.891319708951328 NA exon (NM_144824, exon 1 of 10) exon (NM_144824, exon 1 of 10) 452 NM_144824 216853 Mm.31586 NM_144824 ENSMUSG00000041346 Wrap53 BC021790|Wdr79 WD repeat containing, antisense to Trp53 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-3 chr11 77489206 77489503 + 0.891319708951328 NA intron (NM_172945, intron 1 of 15) intron (NM_172945, intron 1 of 15) 324 NM_172945 268445 Mm.39296 NM_172945 ENSMUSG00000037907 Ankrd13b AW124583|B930093C12Rik ankyrin repeat domain 13b protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-19 chr2 144600143 144600351 + 0.891319708951328 NA intron (NM_025314, intron 1 of 5) CpG 294 NM_025314 66044 Mm.28109 NM_025314 ENSMUSG00000027430 Dtd1 0610006H08Rik|DTD|DUE-B|Hars2 D-tyrosyl-tRNA deacylase 1 protein-coding common_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-3 chr15 102350882 102351087 + 0.891319708951328 NA promoter-TSS (NM_153416) promoter-TSS (NM_153416) 157 NR_155425 102640093 Mm.385825 NR_155425 ENSMUSG00000116402 Gm36246 - predicted gene, 36246 ncRNA common_peak1_9_16_-1.03071091870542_3.57210738189763_0.891319708951328 chr1 159842991 159843190 + 0.891319708951328 NA intron (NM_022312, intron 2 of 22) intron (NM_022312, intron 2 of 22) -201290 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-8 chr13 49322613 49323227 + 0.891319708951328 NA Intergenic Intergenic -13712 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-4 chr4 46649404 46649637 + 0.891319708951328 NA intron (NM_198664, intron 1 of 12) intron (NM_198664, intron 1 of 12) 679 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding common_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-6 chr7 4138120 4138356 + 0.891319708951328 NA intron (NM_172736, intron 1 of 14) intron (NM_172736, intron 1 of 14) 1182 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding common_peak1_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-2 chr2 113849156 113849375 + 0.891319708951328 NA promoter-TSS (NM_181416) promoter-TSS (NM_181416) -604 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-18 chr2 116900225 116900506 + 0.891319708951328 NA intron (NR_040336, intron 1 of 2) intron (NR_040336, intron 1 of 2) 213 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-30 chr8 77510067 77510447 + 0.891319708951328 NA intron (NM_030113, intron 1 of 22) B3|SINE|B2 -6799 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-5 chr12 16851874 16852221 + 0.891319708951328 NA Intergenic Intergenic 41082 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-25 chr6 137519467 137519799 + 0.891319708951328 NA intron (NM_001271587, intron 8 of 20) intron (NM_001271587, intron 8 of 20) 262 NM_001271589 13860 Mm.235346 NM_007945 ENSMUSG00000015766 Eps8 AW261790 epidermal growth factor receptor pathway substrate 8 protein-coding unique_peak2_9_16_-1.03071091870542_3.57210738189763_0.891319708951328-22 chr4 108892926 108893300 + 0.891319708951328 NA intron (NM_023537, intron 2 of 4) intron (NM_023537, intron 2 of 4) 14043 NM_023537 69908 Mm.41580 NM_023537 ENSMUSG00000003411 Rab3b 2610528C18Rik RAB3B, member RAS oncogene family protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-6 chr4 41348266 41348598 + 0.891319708951327 NA promoter-TSS (NM_001290454) promoter-TSS (NM_001290454) -564 NM_001355509 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-13 chr15 13361224 13361488 + 0.891319708951327 NA Intergenic Intergenic -187681 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-12 chr9 63710940 63711383 + 0.891319708951327 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 46833 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_18_8_0.80629343267608_3.57307171778035_0.891319708951327 chr14 7847286 7847506 + 0.891319708951327 NA intron (NM_001081427, intron 1 of 45) ID|SINE|ID 29439 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-8 chr6 82895238 82895495 + 0.891319708951327 NA Intergenic Intergenic -13513 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-5 chr12 80821730 80821978 + 0.891319708951327 NA intron (NM_001242419, intron 1 of 6) intron (NM_001242419, intron 1 of 6) 31322 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-23 chr17 74293425 74293722 + 0.891319708951327 NA intron (NM_133771, intron 1 of 8) intron (NM_133771, intron 1 of 8) 1290 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-34 chr3 144584068 144584530 + 0.891319708951327 NA intron (NM_053102, intron 2 of 4) intron (NM_053102, intron 2 of 4) 13872 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-41 chr7 127477437 127477662 + 0.891319708951327 NA TTS (NM_145589) TTS (NM_145589) 5935 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-24 chr18 35599347 35599634 + 0.891319708951327 NA intron (NM_001357471, intron 1 of 3) intron (NM_001357471, intron 1 of 3) 873 NM_001357472 67869 Mm.126534 NM_026420 ENSMUSG00000037058 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-46 chr9 99646263 99646550 + 0.891319708951327 NA intron (NM_001311142, intron 5 of 15) intron (NM_001311142, intron 5 of 15) 16828 NM_001311142 72507 Mm.221455 NM_028258 ENSMUSG00000037784 Dzip1l 2610524A10Rik|AI663976 DAZ interacting protein 1-like protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-30 chr2 165873167 165873466 + 0.891319708951327 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 5121 NM_001291158 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-39 chr5 130024078 130024282 + 0.891319708951327 NA intron (NM_133768, intron 1 of 16) intron (NM_133768, intron 1 of 16) 201 NM_133768 109900 Mm.23869 NM_133768 ENSMUSG00000025533 Asl 2510006M18Rik|ASAL argininosuccinate lyase protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-18 chr15 102946139 102946390 + 0.891319708951327 NA intron (NR_047528, intron 1 of 1) intron (NR_047528, intron 1 of 1) 1682 NR_047528 100503872 Mm.383980 NR_047528 ENSMUSG00000086903 Hotair Gm16258 HOX transcript antisense RNA (non-protein coding) ncRNA unique_peak2_18_8_0.80629343267608_3.57307171778035_0.891319708951327 chr15 62332590 62332812 + 0.891319708951327 NA Intergenic Intergenic -113250 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-28 chr2 125696651 125697088 + 0.891319708951327 NA intron (NM_199022, intron 1 of 11) intron (NM_199022, intron 1 of 11) 23769 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-2 chr1 91457381 91457650 + 0.891319708951327 NA intron (NM_011066, intron 1 of 22) intron (NM_011066, intron 1 of 22) 1813 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-10 chr13 119756193 119756482 + 0.891319708951327 NA promoter-TSS (NM_175538) promoter-TSS (NM_175538) -455 NM_175538 245269 Mm.403943 NM_175538 ENSMUSG00000095930 Nim1k E130304F04Rik|Nim1 NIM1 serine/threonine protein kinase protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-3 chr1 125436044 125436338 + 0.891319708951327 NA promoter-TSS (NM_001205385) promoter-TSS (NM_001205385) -464 NM_001205385 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-7 chr12 104253060 104253487 + 0.891319708951327 NA intron (NR_033450, intron 4 of 4) intron (NR_033450, intron 4 of 4) 5377 NR_033450 546546 Mm.390522 NM_001034870 Serpina3h 6C28|Spi2 serine (or cysteine) peptidase inhibitor, clade A, member 3H pseudo unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-36 chr4 149990308 149990496 + 0.891319708951327 NA intron (NM_001291004, intron 3 of 4) intron (NM_001291004, intron 3 of 4) 12834 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-13 chr9 124278700 124278955 + 0.891319708951327 NA Intergenic Intergenic 33867 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-43 chr8 91547439 91547770 + 0.891319708951327 NA intron (NM_011936, intron 8 of 8) intron (NM_011936, intron 8 of 8) 234079 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-3 chr14 20894651 20894902 + 0.891319708951327 NA Intergenic Intergenic -34622 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-12 chr15 10695782 10696046 + 0.891319708951327 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 17626 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-9 chr13 97666256 97666673 + 0.891319708951327 NA Intergenic MLT1F2|LTR|ERVL-MaLR 80947 NR_152140 403201 Mm.110162 NR_152140 5330416C01Rik Gm532 RIKEN cDNA 5330416C01 gene ncRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-25 chr19 5793697 5793948 + 0.891319708951327 NA Intergenic AT_rich|Low_complexity|Low_complexity 2159 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-40 chr7 4098592 4098855 + 0.891319708951327 NA intron (NR_033568, intron 5 of 8) CT-rich|Low_complexity|Low_complexity -20807 NM_001109765 57776 Mm.29729 NM_021324 ENSMUSG00000030428 Ttyh1 4930459B04Rik|6330408P11Rik|TTY1|mTTY1|tty tweety family member 1 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327 chr12 32819595 32819800 + 0.891319708951327 NA promoter-TSS (NM_021524) promoter-TSS (NM_021524) -638 NM_021524 59027 Mm.202727 NM_021524 ENSMUSG00000020572 Nampt 1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin nicotinamide phosphoribosyltransferase protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-15 chr15 61446129 61446395 + 0.891319708951327 NA Intergenic Intergenic 328189 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-33 chr3 102677237 102677574 + 0.891319708951327 NA Intergenic Intergenic -57365 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-27 chr2 121872638 121872874 + 0.891319708951327 NA intron (NM_001205371, intron 1 of 9) intron (NM_001205371, intron 1 of 9) 5051 NM_001205371 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-9 chr7 109560887 109561168 + 0.891319708951327 NA intron (NM_001001326, intron 2 of 19) intron (NM_001001326, intron 2 of 19) 40895 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-4 chr10 82762868 82763165 + 0.891319708951327 NA intron (NM_010914, intron 1 of 7) intron (NM_010914, intron 1 of 7) 1125 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-17 chr15 79391633 79391884 + 0.891319708951327 NA intron (NM_172608, intron 1 of 8) intron (NM_172608, intron 1 of 8) 11161 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-38 chr5 64231397 64231594 + 0.891319708951327 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 1138 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-45 chr8 123048357 123048628 + 0.891319708951327 NA Intergenic Intergenic 5917 NR_045268 100503178 Mm.294938 NR_045268 ENSMUSG00000099881 2810013P06Rik - RIKEN cDNA 2810013P06 gene ncRNA common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-11 chr8 126421991 126422224 + 0.891319708951327 NA promoter-TSS (NM_174987) promoter-TSS (NM_174987) -394 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-5 chr2 72439756 72439983 + 0.891319708951327 NA intron (NM_023057, intron 19 of 19) intron (NM_023057, intron 19 of 19) -36350 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-14 chr15 27849556 27849876 + 0.891319708951327 NA intron (NM_001081302, intron 15 of 56) intron (NM_001081302, intron 15 of 56) -168174 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-6 chr12 86770228 86770461 + 0.891319708951327 NA Intergenic Intergenic 35975 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-7 chr5 5181638 5181963 + 0.891319708951327 NA intron (NM_011074, intron 5 of 14) intron (NM_011074, intron 5 of 14) 84268 NM_001310448 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-20 chr17 5567527 5567926 + 0.891319708951327 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 75126 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-21 chr17 17843597 17843928 + 0.891319708951327 NA exon (NM_008215, exon 5 of 5) exon (NM_008215, exon 5 of 5) 11426 NM_008215 15116 Mm.255701 NM_008215 ENSMUSG00000003665 Has1 HAS hyaluronan synthase 1 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-4 chr2 32655801 32656150 + 0.891319708951327 NA intron (NM_001146348, intron 1 of 14) intron (NM_001146348, intron 1 of 14) 3646 NR_035479 100316776 NR_035479 ENSMUSG00000093336 Mir1954 mmu-mir-1954 microRNA 1954 ncRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-19 chr16 10285856 10286311 + 0.891319708951327 NA intron (NM_007929, intron 3 of 4) intron (NM_007929, intron 3 of 4) 27885 NM_007929 13731 Mm.246009 NM_007929 ENSMUSG00000022505 Emp2 XMP epithelial membrane protein 2 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-42 chr8 86744561 86744796 + 0.891319708951327 NA intron (NM_009172, intron 1 of 1) intron (NM_009172, intron 1 of 1) -1021 NR_027829 666945 Mm.391806 NR_027829 Gm10638 - predicted gene 10638 ncRNA common_peak2_18_8_0.80629343267608_3.57307171778035_0.891319708951327-2 chr9 122372013 122372228 + 0.891319708951327 NA intron (NR_152865, intron 2 of 5) intron (NR_152865, intron 2 of 5) 20504 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-35 chr4 115086463 115086740 + 0.891319708951327 NA Intergenic Intergenic -2107 NM_001164558 67182 Mm.30181 NM_026018 ENSMUSG00000028716 Pdzk1ip1 0610007F13Rik|2700030M23Rik|AU046042|Map17 PDZK1 interacting protein 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-29 chr2 152907305 152907533 + 0.891319708951327 NA Intergenic Intergenic -3933 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-32 chr3 102353827 102354069 + 0.891319708951327 NA Intergenic Intergenic 91543 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-44 chr8 105354982 105355224 + 0.891319708951327 NA intron (NM_001081332, intron 2 of 15) intron (NM_001081332, intron 2 of 15) 6845 NM_001081332 277973 Mm.334766 NM_001081332 ENSMUSG00000014786 Slc9a5 Gm696 solute carrier family 9 (sodium/hydrogen exchanger), member 5 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-26 chr19 6256698 6257012 + 0.891319708951327 NA intron (NM_194348, intron 30 of 39) intron (NM_194348, intron 30 of 39) -7788 NR_029830 723957 NR_029830 ENSMUSG00000065582 Mir194-2 Mirn194-2|mir-194-2 microRNA 194-2 ncRNA unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-31 chr3 60574540 60574816 + 0.891319708951327 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 73499 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-11 chr15 3706705 3707121 + 0.891319708951327 NA Intergenic Intergenic -123561 NM_010284 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-22 chr17 21680034 21680269 + 0.891319708951327 NA 5' UTR (NM_001354753, exon 1 of 6) 5' UTR (NM_001354753, exon 1 of 6) 274 NM_001354753 100310809 Mm.293030 NM_001354753 Gm10509 - predicted gene 10509 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327 chr1 44584074 44584288 + 0.891319708951327 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 32510 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-2 chr13 67723499 67723844 + 0.891319708951327 NA intron (NM_145622, intron 1 of 3) intron (NM_145622, intron 1 of 3) 5502 NM_145622 235907 Mm.440123 NM_145622 ENSMUSG00000071281 Zfp65 KRAB5|Zfp71-rs1|pz114 zinc finger protein 65 protein-coding common_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-10 chr8 105554203 105554501 + 0.891319708951327 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 11712 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-37 chr4 155851714 155851968 + 0.891319708951327 NA intron (NM_001356381, intron 1 of 15) intron (NM_001356381, intron 1 of 15) 4439 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-16 chr15 77846504 77846740 + 0.891319708951327 NA Intergenic Intergenic -4447 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_18_8_0.80629343267608_3.57307171778035_0.891319708951327-8 chr13 29831369 29831714 + 0.891319708951327 NA intron (NM_001308486, intron 4 of 5) intron (NM_001308486, intron 4 of 5) 24132 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-9 chr18 75459519 75460033 + 0.890873221665474 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -54869 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-5 chr17 31312372 31312736 + 0.890873221665474 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 16330 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-8 chr6 108450178 108450796 + 0.890873221665474 NA intron (NM_010585, intron 44 of 61) B3|SINE|B2 -39256 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-7 chr5 115068846 115069514 + 0.890873221665474 NA intron (NM_029012, intron 2 of 10) MLT1B|LTR|ERVL-MaLR 38782 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-2 chr10 84390692 84391170 + 0.890873221665474 NA intron (NM_001004363, intron 4 of 6) intron (NM_001004363, intron 4 of 6) 49540 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-4 chr9 66060273 66060613 + 0.890873221665474 NA intron (NM_011149, intron 1 of 4) CpG 274 NM_011149 19035 Mm.335249 NM_011149 ENSMUSG00000032383 Ppib AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b peptidylprolyl isomerase B protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-12 chr7 142454817 142455311 + 0.890873221665474 NA Intergenic Intergenic -5748 NM_001271510 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-2 chr12 70707154 70707692 + 0.890873221665474 NA Intergenic Intergenic -118091 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-4 chr19 47892955 47893407 + 0.890873221665474 NA Intergenic Intergenic 26118 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER inositol 1,4,5-triphosphate receptor interacting protein protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-2 chr1 162123024 162123623 + 0.890873221665474 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -94300 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-7 chr8 3500072 3500276 + 0.890873221665474 NA promoter-TSS (NM_053177) promoter-TSS (NM_053177) -345 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding common_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-3 chr13 97539243 97539605 + 0.890873221665474 NA Intergenic Intergenic -20576 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-5 chr4 137489142 137489466 + 0.890873221665474 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 20501 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474 chr10 109903460 109903868 + 0.890873221665474 NA intron (NM_001081035, intron 2 of 38) intron (NM_001081035, intron 2 of 38) 96555 NM_001081035 260315 Mm.225050 NM_177797 ENSMUSG00000020181 Nav3 4732483H20Rik|9630020C08Rik|POMFIL1|Pomfil1p|mKIAA0938|unc53H3 neuron navigator 3 protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-4 chr15 81729425 81729680 + 0.890873221665474 NA intron (NM_011241, intron 1 of 16) CpG 367 NM_011241 19387 Mm.270975 NM_011241 ENSMUSG00000022391 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-3 chr12 51694833 51695381 + 0.890873221665474 NA intron (NM_001329698, intron 1 of 5) intron (NM_001329698, intron 1 of 5) -3193 NM_052973 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-8 chr8 94905180 94905402 + 0.890873221665474 NA exon (NM_001033533, exon 8 of 9) exon (NM_001033533, exon 8 of 9) 12807 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-6 chr6 127150448 127150825 + 0.890873221665474 NA exon (NM_009829, exon 1 of 5) exon (NM_009829, exon 1 of 5) 412 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding common_peak1_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-2 chr5 33018243 33018489 + 0.890873221665474 NA promoter-TSS (NM_011738) promoter-TSS (NM_011738) -450 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-8 chr17 28485608 28485957 + 0.890873221665474 NA intron (NM_010220, intron 1 of 10) CpG 367 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-10 chr8 90795111 90795530 + 0.890873221665474 NA Intergenic Intergenic -33515 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-3 chr12 70890520 70890810 + 0.890873221665474 NA intron (NM_028127, intron 10 of 13) intron (NM_028127, intron 10 of 13) -47192 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak2_33_17_0.639905855894139_4.48987792938938_0.890873221665474 chr3 34019575 34019852 + 0.890873221665474 NA promoter-TSS (NM_001113188) promoter-TSS (NM_001113188) -366 NM_008053 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-6 chr17 35815844 35816475 + 0.890873221665474 NA Intergenic Intergenic -5554 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-2 chr11 76178959 76179481 + 0.890873221665474 NA intron (NM_026664, intron 1 of 21) intron (NM_026664, intron 1 of 21) 410 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding unique_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-2 chr4 63529389 63529896 + 0.890873221665474 NA Intergenic Intergenic -15123 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-9 chr7 127243893 127244386 + 0.890873221665474 NA promoter-TSS (NM_177362) promoter-TSS (NM_177362) -387 NM_177362 244216 Mm.41038 NM_177362 ENSMUSG00000054716 Zfp771 G630024C07Rik|Znf771 zinc finger protein 771 protein-coding common_peak1_19_28_-0.808284052155898_4.45383896904962_0.890873221665474 chr13 55635026 55635253 + 0.890873221665474 NA 5' UTR (NM_001282055, exon 1 of 23) 5' UTR (NM_001282055, exon 1 of 23) 140 NM_001282055 212880 Mm.202725 NM_145975 ENSMUSG00000021500 Ddx46 2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding common_peak2_33_17_0.639905855894139_4.48987792938938_0.890873221665474-3 chr7 114116803 114117158 + 0.890873221665474 NA intron (NM_025846, intron 1 of 5) CpG 801 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-11 chr3 55600825 55601268 + 0.890873221665474 NA Intergenic Intergenic 139318 NM_001357476 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474 chr10 80751818 80752038 + 0.890873221665474 NA Intergenic Intergenic -3275 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_33_17_0.639905855894139_4.48987792938938_0.890873221665474-2 chr6 58841574 58841938 + 0.890873221665474 NA intron (NM_028705, intron 1 of 24) intron (NM_028705, intron 1 of 24) 8056 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_20_28_-0.738391319534948_4.4887853353601_0.890873221665474 chr3 142372520 142372918 + 0.890873221665474 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 19131 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-4 chr11 82033287 82033633 + 0.890873221665474 NA Intergenic Intergenic -2117 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-4 chr16 52031312 52031777 + 0.890873221665474 NA promoter-TSS (NM_001033238) promoter-TSS (NM_001033238) -5 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-5 chr2 117949687 117950199 + 0.890873221665474 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 128015 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-8 chr6 128760298 128760642 + 0.890873221665474 NA Intergenic CpG 28171 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Klrb1b|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1b|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-5 chr11 116387455 116387750 + 0.890873221665474 NA intron (NM_027258, intron 2 of 18) intron (NM_027258, intron 2 of 18) 25430 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-3 chr5 108694503 108694786 + 0.890873221665474 NA intron (NM_054071, intron 1 of 6) CpG 415 NM_054071 116701 Mm.35691 NM_054071 ENSMUSG00000008090 Fgfrl1 FGFR5|FGFR5beta|FGFR5gamma fibroblast growth factor receptor-like 1 protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474 chr11 95101097 95101389 + 0.890873221665474 NA Intergenic Intergenic -18874 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-6 chr13 108244445 108244854 + 0.890873221665474 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 30245 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474 chr11 98709140 98709596 + 0.890873221665474 NA intron (NM_001361995, intron 19 of 25) intron (NM_001361995, intron 19 of 25) 8055 NM_009971 12985 Mm.1238 NM_009971 ENSMUSG00000038067 Csf3 Csfg|G-CSF|MGI-IG colony stimulating factor 3 (granulocyte) protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-3 chr12 112678428 112679031 + 0.890873221665474 NA promoter-TSS (NM_001100460) promoter-TSS (NM_001100460) -111 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-4 chr14 121712960 121713354 + 0.890873221665474 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -14740 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-3 chr8 46618561 46619186 + 0.890873221665474 NA intron (NM_001284409, intron 1 of 6) intron (NM_001284409, intron 1 of 6) 1582 NM_009810 12367 Mm.34405 NM_009810 ENSMUSG00000031628 Casp3 A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy caspase 3 protein-coding common_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-7 chr19 40894241 40894596 + 0.890873221665474 NA promoter-TSS (NM_028319) promoter-TSS (NM_028319) -285 NR_106167 102466881 NR_106167 ENSMUSG00000099118 Mir8092 Gm27407|mmu-mir-8092 microRNA 8092 ncRNA unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-3 chr1 180641394 180641923 + 0.890873221665474 NA intron (NM_001103182, intron 1 of 14) CpG 508 NR_120498 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-2 chr12 77957669 77958040 + 0.890873221665474 NA Intergenic Intergenic -268801 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-10 chr19 7310052 7310505 + 0.890873221665474 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -14831 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474 chr1 75458126 75458820 + 0.890873221665474 NA intron (NM_183022, intron 1 of 9) intron (NM_183022, intron 1 of 9) 7963 NM_183022 241118 Mm.110790 NM_183022 ENSMUSG00000033007 Asic4 Accn4|BNAC4 acid-sensing (proton-gated) ion channel family member 4 protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-9 chr8 36745814 36746230 + 0.890873221665474 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -12968 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_33_17_0.639905855894139_4.48987792938938_0.890873221665474-7 chr17 8147281 8147764 + 0.890873221665474 NA intron (NM_026611, intron 1 of 8) intron (NM_026611, intron 1 of 8) 266 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474-9 chr8 128164606 128164915 + 0.890873221665474 NA Intergenic Intergenic 113465 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak2_20_28_-0.738391319534948_4.4887853353601_0.890873221665474 chr17 24251745 24252297 + 0.890873221665474 NA promoter-TSS (NM_007634) promoter-TSS (NM_007634) -612 NM_007634 12449 Mm.77695 NM_007634 ENSMUSG00000072082 Ccnf CycF|Fbxo1 cyclin F protein-coding unique_peak2_19_28_-0.808284052155898_4.45383896904962_0.890873221665474-6 chr5 103738247 103738736 + 0.890873221665474 NA Intergenic Intergenic -15671 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_111_71_0.347664133203124_6.34375706804387_0.890162645893217 chr15 95804592 95805124 + 0.890162645893217 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 14015 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak2_112_71_0.360397700217939_6.35012385155128_0.890162645893217 chr2 131901757 131902744 + 0.890162645893217 NA Intergenic Intergenic -7678 NM_011170 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding common_peak2_86_92_-0.38341018750331_6.34745371735638_0.890162645893192-2 chr8 111657763 111658707 + 0.890162645893192 NA intron (NM_001358993, intron 1 of 3) intron (NM_001358993, intron 1 of 3) 14792 NM_011742 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak2_86_92_-0.38341018750331_6.34745371735638_0.890162645893192 chr8 80857709 80858896 + 0.890162645893192 NA intron (NM_021356, intron 1 of 9) ID_B1|SINE|B4 22177 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak2_54_62_-0.478447622148978_5.73805611242543_0.890023188174771 chr15 10689489 10690200 + 0.890023188174771 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 23696 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_75_45_0.438546518914889_5.74283521551446_0.890023188174759-2 chr2 153431500 153432980 + 0.890023188174759 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 12239 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak2_75_45_0.438546518914889_5.74283521551446_0.890023188174759-5 chr9 50775119 50775857 + 0.890023188174759 NA exon (NM_133981, exon 1 of 15) exon (NM_133981, exon 1 of 15) 263 NR_045601 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding common_peak2_75_45_0.438546518914889_5.74283521551446_0.890023188174759 chr13 110928977 110929597 + 0.890023188174759 NA Intergenic Intergenic -25441 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_74_45_0.41957250832275_5.73334821021839_0.890023188174759-2 chr5 122158471 122159051 + 0.890023188174759 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 482 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak2_75_45_0.438546518914889_5.74283521551446_0.890023188174759-2 chr2 167503439 167503994 + 0.890023188174759 NA intron (NR_153838, intron 1 of 4) CpG 273 NM_001360930 81018 Mm.22225 NM_030743 ENSMUSG00000006418 Rnf114 1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228 ring finger protein 114 protein-coding common_peak2_75_45_0.438546518914889_5.74283521551446_0.890023188174759-4 chr7 142373093 142373670 + 0.890023188174759 NA intron (NM_001347541, intron 1 of 2) intron (NM_001347541, intron 1 of 2) 365 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_74_45_0.41957250832275_5.73334821021839_0.890023188174759-3 chr8 84197684 84198430 + 0.890023188174759 NA Intergenic Intergenic -10461 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak1_74_45_0.41957250832275_5.73334821021839_0.890023188174759 chr15 25413317 25413761 + 0.890023188174759 NA promoter-TSS (NR_027376) promoter-TSS (NR_027376) 225 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_75_45_0.438546518914889_5.74283521551446_0.890023188174759 chr19 44281104 44281927 + 0.890023188174759 NA Intergenic Intergenic -12161 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_75_45_0.438546518914889_5.74283521551446_0.890023188174759-3 chr7 109577304 109577991 + 0.890023188174759 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 38921 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_75_45_0.438546518914889_5.74283521551446_0.890023188174759-3 chr9 123529881 123530787 + 0.890023188174759 NA intron (NM_001357485, intron 1 of 19) intron (NM_001357485, intron 1 of 19) 581 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak2_102_64_0.375219552029773_6.20997758904334_0.889713839646341 chr12 3365309 3366239 + 0.889713839646341 NA 5' UTR (NM_008445, exon 1 of 8) 5' UTR (NM_008445, exon 1 of 8) 642 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak1_77_84_-0.410072139028378_6.20435486662351_0.889713839646341 chr1 134092099 134093013 + 0.889713839646341 NA Intergenic Intergenic -13401 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_102_64_0.375219552029773_6.20997758904334_0.889713839646341 chr8 25200898 25202043 + 0.889713839646341 NA promoter-TSS (NM_177089) promoter-TSS (NM_177089) 72 NM_199323 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding common_peak1_156_103_0.300977592883314_6.85092851458275_0.889701898518236 chr16 20672807 20674212 + 0.889701898518236 NA intron (NM_145941, intron 1 of 32) intron (NM_145941, intron 1 of 32) 782 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding common_peak2_156_103_0.300977592883314_6.85092851458275_0.889701898518236 chr15 102921313 102922321 + 0.889701898518236 NA exon (NM_010464, exon 1 of 2) exon (NM_010464, exon 1 of 2) 686 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding common_peak2_61_69_-0.458833477392185_5.89986627824887_0.889546191492175 chr12 111166543 111167284 + 0.889546191492175 NA intron (NM_001286122, intron 1 of 9) CpG 543 NM_011632 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_61_69_-0.458833477392185_5.89986627824887_0.889546191492175 chr13 51099643 51100702 + 0.889546191492175 NA promoter-TSS (NM_001283030) promoter-TSS (NM_001283030) 555 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA common_peak2_83_51_0.405039998305044_5.90295971729361_0.889546191492162-2 chr10 8885634 8886338 + 0.889546191492162 NA promoter-TSS (NM_175155) promoter-TSS (NM_175155) 84 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding common_peak1_83_51_0.405039998305044_5.90295971729361_0.889546191492162 chr11 83897097 83898074 + 0.889546191492162 NA intron (NM_009330, intron 8 of 8) intron (NM_009330, intron 8 of 8) -44505 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_83_51_0.405039998305044_5.90295971729361_0.889546191492162 chr1 153130382 153131592 + 0.889546191492162 NA intron (NM_008485, intron 18 of 23) intron (NM_008485, intron 18 of 23) 55460 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak1_160_159_-0.284470723090223_7.17969273334225_0.8889918453782 chr13 48966736 48968712 + 0.8889918453782 NA promoter-TSS (NR_015601) promoter-TSS (NR_015601) 104 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding common_peak1_299_209_0.214778987567153_7.8216350114497_0.888823943494893 chr17 4993726 4997136 + 0.888823943494893 NA exon (NM_001085355, exon 1 of 20) exon (NM_001085355, exon 1 of 20) 357 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_389_276_0.191123570667525_8.20930395138295_0.888361806188107 chr3 90585861 90587699 + 0.888361806188107 NA promoter-TSS (NM_001355600) promoter-TSS (NM_001355600) -172 NM_001355600 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak2_29_38_-0.65486967366312_4.95796738203069_0.887741995158868-2 chr4 139601176 139602048 + 0.887741995158868 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) -21282 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak1_45_25_0.542413583655163_4.97164650996867_0.887741995158868 chr17 35867777 35868164 + 0.887741995158868 NA exon (NM_175242, exon 1 of 3) exon (NM_175242, exon 1 of 3) 1355 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak1_45_25_0.542413583655163_4.97164650996867_0.887741995158868-4 chr3 143191524 143192241 + 0.887741995158868 NA Intergenic Intergenic -51173 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA common_peak1_29_38_-0.65486967366312_4.95796738203069_0.887741995158868-2 chr13 93998356 93998747 + 0.887741995158868 NA Intergenic Intergenic -59245 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_45_25_0.542413583655163_4.97164650996867_0.887741995158868-3 chr2 152791864 152792620 + 0.887741995158868 NA intron (NM_009743, intron 2 of 2) B3|SINE|B2 36247 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_45_25_0.542413583655163_4.97164650996867_0.887741995158868 chr5 5687323 5687705 + 0.887741995158868 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 6575 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak2_29_38_-0.65486967366312_4.95796738203069_0.887741995158868 chr16 22857841 22858561 + 0.887741995158868 NA promoter-TSS (NM_001316746) promoter-TSS (NM_001316746) 356 NM_001190804 67838 Mm.37516 NM_026400 ENSMUSG00000004460 Dnajb11 1810031F23Rik|ABBP-2|AL024055|Dj9|ERdj3|ERj3p DnaJ heat shock protein family (Hsp40) member B11 protein-coding common_peak2_29_38_-0.65486967366312_4.95796738203069_0.887741995158868-3 chr5 113627734 113628276 + 0.887741995158868 NA intron (NM_008153, intron 1 of 2) MIRc|SINE|MIR 15598 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_29_38_-0.65486967366312_4.95796738203069_0.887741995158868 chr11 82870622 82871177 + 0.887741995158868 NA promoter-TSS (NM_001164570) promoter-TSS (NM_001164570) -155 NM_001164570 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak2_29_38_-0.65486967366312_4.95796738203069_0.887741995158868 chr3 127553020 127553346 + 0.887741995158868 NA promoter-TSS (NM_197997) promoter-TSS (NM_197997) 166 NM_138593 28036 Mm.291032 NM_138593 ENSMUSG00000027968 Larp7 C330027G06Rik|D3Wsu161e La ribonucleoprotein domain family, member 7 protein-coding common_peak2_45_25_0.542413583655163_4.97164650996867_0.887741995158868-2 chr5 32191464 32191987 + 0.887741995158868 NA Intergenic Intergenic -40983 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_45_25_0.542413583655163_4.97164650996867_0.887741995158868-2 chr19 3685651 3686170 + 0.887741995158868 NA intron (NM_008513, intron 1 of 22) CpG 654 NM_008513 16973 Mm.274581 NM_008513 ENSMUSG00000024913 Lrp5 BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142 low density lipoprotein receptor-related protein 5 protein-coding common_peak1_45_25_0.542413583655163_4.97164650996867_0.887741995158868-5 chr8 26832005 26832453 + 0.887741995158868 NA Intergenic B1F|SINE|Alu -7806 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_29_38_-0.65486967366312_4.95796738203069_0.887741995158868-3 chr16 85897835 85898425 + 0.887741995158868 NA intron (NM_011782, intron 1 of 7) (CA)n|Simple_repeat|Simple_repeat 2995 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak2_29_38_-0.65486967366312_4.95796738203069_0.887741995158868-4 chr5 113629662 113630196 + 0.887741995158868 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 13674 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak1_45_25_0.542413583655163_4.97164650996867_0.887741995158868 chr19 56202899 56203519 + 0.887741995158868 NA Intergenic Intergenic -84703 NM_001329936 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding common_peak2_95_101_-0.375659654672733_6.48459551463513_0.88637726057726 chr5 64803371 64804637 + 0.88637726057726 NA intron (NM_008453, intron 1 of 5) CpG 481 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_199_194_-0.259141410743791_7.47775960837772_0.886300419961429 chr19 36128885 36130267 + 0.886300419961429 NA Intergenic Intergenic -9732 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_148_149_-0.302321293970614_7.07765804351057_0.886134329387036 chr12 111538162 111539260 + 0.886134329387036 NA intron (NM_178041, intron 2 of 11) CpG-3539 610 NM_173363 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak1_173_171_-0.27757111067062_7.28747919936679_0.885320765904129 chr13 100650527 100652277 + 0.885320765904129 NA promoter-TSS (NM_001283011) promoter-TSS (NM_001283011) 59 NM_027592 102216272 Mm.301148 NM_027592 ENSMUSG00000078941 Ak6 2810046E22Rik|4921516M08Rik|AK/ATPase adenylate kinase 6 protein-coding unique_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-5 chr7 27490897 27491521 + 0.884951936461256 NA TTS (NM_018820) TTS (NM_018820) 4256 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding unique_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-5 chr5 121833896 121834552 + 0.884951936461256 NA intron (NM_001306127, intron 1 of 8) intron (NM_001306127, intron 1 of 8) 1880 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-8 chr5 92434590 92435083 + 0.884951936461256 NA intron (NM_001359995, intron 1 of 12) CpG 363 NM_001359995 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding common_peak1_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-2 chr17 57010982 57011186 + 0.884951936461256 NA intron (NM_133801, intron 1 of 12) CpG 204 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256 chr1 40279059 40279863 + 0.884951936461256 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 12875 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-4 chr16 97921823 97922415 + 0.884951936461256 NA exon (NM_174847, exon 1 of 14) exon (NM_174847, exon 1 of 14) 514 NM_174847 207781 Mm.1465 NM_174847 ENSMUSG00000045975 C2cd2 5730563M15|5830404H04Rik|AI314146|AI449533|BF168443|ORF25|mKIAA4045 C2 calcium-dependent domain containing 2 protein-coding common_peak2_39_21_0.583210344761133_4.75103679101786_0.884951936461256-4 chr4 59331208 59331691 + 0.884951936461256 NA intron (NM_001163288, intron 13 of 16) intron (NM_001163288, intron 13 of 16) 71398 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak1_25_33_-0.661924666795226_4.75650050785273_0.884951936461256 chr16 45885877 45886241 + 0.884951936461256 NA Intergenic Intergenic -41308 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-4 chr2 151960702 151961173 + 0.884951936461256 NA Intergenic Intergenic 6680 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-7 chr4 155811967 155812275 + 0.884951936461256 NA promoter-TSS (NM_207678) promoter-TSS (NM_207678) -368 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak2_39_21_0.583210344761133_4.75103679101786_0.884951936461256-3 chr2 151921739 151922332 + 0.884951936461256 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 10828 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-4 chr4 103113615 103114206 + 0.884951936461256 NA promoter-TSS (NM_001286222) promoter-TSS (NM_001286222) 389 NM_146254 242584 Mm.374877 NM_146254 ENSMUSG00000035126 Wdr78 BC028975 WD repeat domain 78 protein-coding unique_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-3 chr5 50033973 50034687 + 0.884951936461256 NA intron (NM_133911, intron 1 of 18) intron (NM_133911, intron 1 of 18) 24666 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding common_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-3 chr18 78072686 78073194 + 0.884951936461256 NA Intergenic Lx5|LINE|L1 -15672 NM_001101038 620235 Mm.35607 NM_001101038 ENSMUSG00000091055 Siglec15 Cd33l3|EG620235|SIGLEC-I sialic acid binding Ig-like lectin 15 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-10 chr5 151110084 151110398 + 0.884951936461256 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 79952 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-12 chr9 58506783 58507232 + 0.884951936461256 NA Intergenic Intergenic 18404 NM_176921 319477 Mm.153674 NM_176921 ENSMUSG00000066607 6030419C18Rik - RIKEN cDNA 6030419C18 gene protein-coding unique_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-6 chrX 94178272 94178830 + 0.884951936461256 NA Intergenic Intergenic 34100 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-3 chr10 10556628 10557121 + 0.884951936461256 NA intron (NM_026405, intron 1 of 2) intron (NM_026405, intron 1 of 2) 1333 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding unique_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-2 chr11 76945188 76945816 + 0.884951936461256 NA promoter-TSS (NM_178645) promoter-TSS (NM_178645) -154 NM_178645 104184 Mm.399785 NM_178645 ENSMUSG00000020840 Blmh AI035728|Bh|Bmh bleomycin hydrolase protein-coding common_peak2_25_33_-0.661924666795226_4.75650050785273_0.884951936461256 chr15 27937292 27937532 + 0.884951936461256 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 88436 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-4 chr5 32195533 32195876 + 0.884951936461256 NA Intergenic C-rich|Low_complexity|Low_complexity -37004 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-5 chr2 152350095 152350660 + 0.884951936461256 NA intron (NR_033505, intron 1 of 4) B1_Mus2|SINE|Alu 4708 NR_033505 791417 Mm.451219 NR_033505 ENSMUSG00000068062 Gm14164 - predicted gene 14164 ncRNA common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-2 chr1 132339381 132339988 + 0.884951936461256 NA Intergenic Intergenic 23559 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-11 chr8 105269380 105269735 + 0.884951936461256 NA promoter-TSS (NM_001256044) promoter-TSS (NM_001256044) -244 NM_011939 26386 Mm.89204 NM_011939 ENSMUSG00000033249 Hsf4 HSF 4|HSTF 4|HSTF4|ldis1|mHSF4 heat shock transcription factor 4 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-9 chr5 107086756 107087220 + 0.884951936461256 NA Intergenic Intergenic 122427 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-5 chr8 36744168 36744431 + 0.884951936461256 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -11245 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-2 chr18 80550150 80550627 + 0.884951936461256 NA Intergenic Intergenic -5842 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_39_21_0.583210344761133_4.75103679101786_0.884951936461256 chr19 4268849 4269206 + 0.884951936461256 NA exon (NM_001356620, exon 1 of 14) exon (NM_001356620, exon 1 of 14) 206 NM_001356620 245857 Mm.248388 NM_198113 ENSMUSG00000034616 Ssh3 SSH-3|SSH-3L slingshot protein phosphatase 3 protein-coding unique_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-4 chr6 47830214 47830823 + 0.884951936461256 NA promoter-TSS (NM_177882) promoter-TSS (NM_177882) -13 NM_177882 330301 Mm.128149 NM_177882 ENSMUSG00000051499 Zfp786 A730012O14Rik|Znf786 zinc finger protein 786 protein-coding unique_peak2_25_33_-0.661924666795226_4.75650050785273_0.884951936461256 chr17 28343904 28344362 + 0.884951936461256 NA intron (NM_011566, intron 1 of 12) intron (NM_011566, intron 1 of 12) 6213 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak1_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-3 chr3 127553058 127553285 + 0.884951936461256 NA promoter-TSS (NM_197997) promoter-TSS (NM_197997) 178 NM_138593 28036 Mm.291032 NM_138593 ENSMUSG00000027968 Larp7 C330027G06Rik|D3Wsu161e La ribonucleoprotein domain family, member 7 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-4 chr2 141587809 141588149 + 0.884951936461256 NA intron (NM_001013802, intron 6 of 18) intron (NM_001013802, intron 6 of 18) -916503 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-13 chr9 102726536 102727118 + 0.884951936461256 NA intron (NM_019764, intron 5 of 9) intron (NM_019764, intron 5 of 9) 9023 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256 chr10 126927935 126928661 + 0.884951936461256 NA Intergenic Intergenic -26927 NM_001358970 68876 Mm.276769 NM_026858 ENSMUSG00000025436 Atp23 1110068E08Rik|2410012H02Rik|Xrcc6bp1 ATP23 metallopeptidase and ATP synthase assembly factor homolog protein-coding unique_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-3 chr12 9978644 9979096 + 0.884951936461256 NA Intergenic Intergenic -391101 NM_027588 70881 Mm.272843 NM_027588 ENSMUSG00000020622 Nt5c1b 4921514H13Rik|AIRP|CN-IB|cN1B 5'-nucleotidase, cytosolic IB protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256 chr1 21009122 21009443 + 0.884951936461256 NA intron (NM_177409, intron 4 of 10) intron (NM_177409, intron 4 of 10) 57656 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-6 chr4 108578772 108579231 + 0.884951936461256 NA promoter-TSS (NM_011015) promoter-TSS (NM_011015) 335 NM_172697 230596 Mm.157534 NM_172697 ENSMUSG00000063800 Prpf38a 2410002M20Rik PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein-coding unique_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256 chr1 130661857 130662464 + 0.884951936461256 NA promoter-TSS (NM_007576) promoter-TSS (NM_007576) -542 NM_007576 12269 Mm.306720 NM_007576 ENSMUSG00000026405 C4bp AI195242|C4bpa complement component 4 binding protein protein-coding common_peak2_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-3 chr2 73893042 73893507 + 0.884951936461256 NA promoter-TSS (NM_001284376) promoter-TSS (NM_001284376) -635 NM_001284370 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding unique_peak1_39_21_0.583210344761133_4.75103679101786_0.884951936461256-2 chr11 35953150 35953689 + 0.884951936461256 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 26670 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_39_21_0.583210344761133_4.75103679101786_0.884951936461256-2 chr2 25403193 25403590 + 0.884951936461256 NA intron (NM_008721, intron 1 of 8) CpG 341 NM_008721 18146 Mm.1131 NM_008721 ENSMUSG00000015094 Npdc1 AI314472|NPDC-1 neural proliferation, differentiation and control 1 protein-coding common_peak2_24_33_-0.718108999524787_4.72840834148795_0.884951936461256-2 chr15 36182228 36182713 + 0.884951936461256 NA intron (NM_012031, intron 2 of 18) intron (NM_012031, intron 2 of 18) 2940 NM_012031 26942 Mm.295539 NM_012031 ENSMUSG00000037617 Spag1 tpis sperm associated antigen 1 protein-coding common_peak2_25_33_-0.661924666795226_4.75650050785273_0.884951936461256-5 chr4 155624851 155625248 + 0.884951936461256 NA promoter-TSS (NR_040441) promoter-TSS (NR_040441) 195 NM_001355568 12537 Mm.267410 NM_007661 ENSMUSG00000029062 Cdk11b AA989746|CDK11-p110|CDK11-p46|CDK11-p58|Cdc11b|Cdc2l1|Cdc2l2|Cdk11|p58 cyclin-dependent kinase 11B protein-coding common_peak2_157_104_0.29626716903591_6.86237910218408_0.884629301985528 chr4 41313731 41314828 + 0.884629301985528 NA intron (NM_026893, intron 1 of 8) intron (NM_026893, intron 1 of 8) 622 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak2_137_139_-0.312649092494501_6.97295847069772_0.884573974983736 chr17 6827412 6828968 + 0.884573974983736 NA Intergenic CpG -45410 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_169_113_0.282487782779101_6.97413390555429_0.884573974983736 chr10 122984268 122985785 + 0.884573974983736 NA TTS (NR_029527) TTS (NR_029527) 698 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_169_113_0.282487782779101_6.97413390555429_0.884573974983736 chr4 42999405 43000367 + 0.884573974983736 NA intron (NM_009503, intron 1 of 16) CpG 621 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak2_70_77_-0.420781477155518_6.07501148028449_0.883630128407083 chr3 58413876 58414537 + 0.883630128407083 NA promoter-TSS (NM_001081229) promoter-TSS (NM_001081229) -514 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_70_77_-0.420781477155518_6.07501148028449_0.883630128407083 chr10 59951021 59951701 + 0.883630128407083 NA exon (NM_029083, exon 2 of 3) exon (NM_029083, exon 2 of 3) 409 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak2_70_77_-0.420781477155518_6.07501148028449_0.883630128407083-2 chr3 138526520 138526969 + 0.883630128407083 NA promoter-TSS (NM_001313980) promoter-TSS (NM_001313980) 323 NR_035481 100316706 NR_035481 ENSMUSG00000088373 Mir1956 mir-1956|mmu-mir-1956 microRNA 1956 ncRNA common_peak1_93_58_0.383963274366969_6.07462468654533_0.883630128407083 chr4 107467570 107468274 + 0.883630128407083 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 33203 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_93_58_0.383963274366969_6.07462468654533_0.883630128407083 chr17 24669822 24670551 + 0.883630128407083 NA intron (NM_001348231, intron 1 of 11) intron (NM_001348231, intron 1 of 11) 499 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding common_peak1_113_72_0.353119518319339_6.36638431803969_0.882982443493697 chr13 98691389 98692807 + 0.882982443493697 NA exon (NM_001025606, exon 2 of 4) exon (NM_001025606, exon 2 of 4) 2733 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_113_72_0.353119518319339_6.36638431803969_0.882982443493697 chr3 96172586 96173345 + 0.882982443493697 NA intron (NM_153053, intron 1 of 5) intron (NM_153053, intron 1 of 5) 459 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak2_87_93_-0.382468428653822_6.36335463735073_0.882982443493672 chr1 182088205 182090071 + 0.882982443493672 NA Intergenic Intergenic -35599 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_87_93_-0.382468428653822_6.36335463735073_0.882982443493672-2 chr10 79682282 79683321 + 0.882982443493672 NA intron (NM_001359818, intron 1 of 4) intron (NM_001359818, intron 1 of 4) 606 NM_001359817 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding common_peak2_87_93_-0.382468428653822_6.36335463735073_0.882982443493672-3 chr6 39117513 39118773 + 0.882982443493672 NA promoter-TSS (NR_045813) promoter-TSS (NR_045813) 206 NM_172893 243771 Mm.268462 NM_172893 ENSMUSG00000038507 Parp12 9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 protein-coding common_peak1_47_56_-0.529069347292736_5.56835534051837_0.882800373073339 chr7 28049276 28050012 + 0.882800373073339 NA intron (NM_011874, intron 1 of 10) intron (NM_011874, intron 1 of 10) 448 NM_011874 23996 Mm.29582 NM_011874 ENSMUSG00000030603 Psmc4 CIP21|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding unique_peak1_67_40_0.445223873145124_5.58016394119065_0.882800373073339 chr15 58164891 58165399 + 0.882800373073339 NA Intergenic Intergenic 23779 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak2_48_56_-0.499531870798687_5.5831240787654_0.882800373073339-2 chr9 102733539 102734628 + 0.882800373073339 NA TTS (NM_019764) TTS (NM_019764) -5565 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_47_56_-0.529069347292736_5.56835534051837_0.882800373073339 chr10 120582777 120583397 + 0.882800373073339 NA Intergenic Intergenic -106618 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak1_67_40_0.445223873145124_5.58016394119065_0.882800373073339 chr11 100622913 100623534 + 0.882800373073339 NA intron (NM_028024, intron 1 of 3) intron (NM_028024, intron 1 of 3) 268 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding common_peak2_47_56_-0.529069347292736_5.56835534051837_0.882800373073339-4 chr6 73248284 73248949 + 0.882800373073339 NA 5' UTR (NM_019879, exon 1 of 9) 5' UTR (NM_019879, exon 1 of 9) 111 NM_019879 56451 Mm.29845 NM_019879 ENSMUSG00000052738 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit protein-coding common_peak2_48_56_-0.499531870798687_5.5831240787654_0.882800373073339 chr9 73906363 73906967 + 0.882800373073339 NA intron (NM_001081153, intron 1 of 30) intron (NM_001081153, intron 1 of 30) 26902 NM_001081153 208898 Mm.41035 NM_001081153 ENSMUSG00000062151 Unc13c 1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3 unc-13 homolog C (C. elegans) protein-coding common_peak2_47_56_-0.529069347292736_5.56835534051837_0.882800373073339-2 chr19 38030190 38030822 + 0.882800373073339 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 13071 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_47_56_-0.529069347292736_5.56835534051837_0.882800373073339-3 chr5 117286899 117287615 + 0.882800373073339 NA intron (NM_018858, intron 1 of 3) intron (NM_018858, intron 1 of 3) 307 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding common_peak2_67_40_0.445223873145124_5.58016394119065_0.882800373073339 chr3 109026946 109027648 + 0.882800373073339 NA exon (NM_001163567, exon 1 of 11) exon (NM_001163567, exon 1 of 11) 310 NM_001163567 329739 Mm.69013 NM_001163567 ENSMUSG00000040339 Fam102b 1600010D10Rik|B430201A12Rik family with sequence similarity 102, member B protein-coding common_peak1_67_40_0.445223873145124_5.58016394119065_0.882800373073339-2 chr3 57410758 57411455 + 0.882800373073339 NA Intergenic Intergenic -14304 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding common_peak2_150_150_-0.292806835068039_7.09200132179106_0.88183373520248 chr6 72549118 72550382 + 0.88183373520248 NA 5' UTR (NM_001271395, exon 1 of 10) 5' UTR (NM_001271395, exon 1 of 10) 103 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_183_123_0.274547032262891_7.09146982651832_0.88183373520248 chr7 134224208 134225547 + 0.88183373520248 NA exon (NM_007400, exon 1 of 23) exon (NM_007400, exon 1 of 23) 220 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_78_85_-0.408697088426822_6.22191621048869_0.881817354409502 chr19 24477638 24478107 + 0.881817354409502 NA promoter-TSS (NM_026520) promoter-TSS (NM_026520) -398 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|Gm9849 family with sequence similarity 122, member A protein-coding common_peak2_78_85_-0.408697088426822_6.22191621048869_0.881817354409502 chr8 3493149 3494067 + 0.881817354409502 NA intron (NM_080461, intron 1 of 1) CpG 470 NM_080461 140482 Mm.299073 NM_080461 ENSMUSG00000047264 Zfp358 Zfend zinc finger protein 358 protein-coding common_peak2_103_65_0.367034095950171_6.22791116733354_0.881817354409502 chr8 25200737 25201873 + 0.881817354409502 NA 5' UTR (NM_177089, exon 1 of 13) 5' UTR (NM_177089, exon 1 of 13) 237 NM_199323 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding common_peak1_78_85_-0.408697088426822_6.22191621048869_0.881817354409502-2 chr2 148856476 148857420 + 0.881817354409502 NA Intergenic Intergenic -6014 NM_029960 77705 Mm.159975 NM_029960 ENSMUSG00000027446 9230104L09Rik mCST E2 RIKEN cDNA 9230104L09 gene protein-coding common_peak2_117_120_-0.32651713152516_6.75560467151201_0.881286707996298-3 chr3 121700245 121701700 + 0.881286707996298 NA Intergenic Intergenic -22565 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_117_120_-0.32651713152516_6.75560467151201_0.881286707996298 chr12 85598463 85600175 + 0.881286707996298 NA promoter-TSS (NM_030887) promoter-TSS (NM_030887) -97 NM_030887 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak2_117_120_-0.32651713152516_6.75560467151201_0.881286707996298-2 chr15 90678147 90679825 + 0.881286707996298 NA intron (NM_001033851, intron 1 of 3) intron (NM_001033851, intron 1 of 3) 402 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding common_peak1_146_96_0.307225923833137_6.7535258041037_0.881286707996298 chr15 27404554 27405744 + 0.881286707996298 NA Intergenic Intergenic -61528 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_162_161_-0.2847070131602_7.19749649630452_0.880967869450431 chr19 37206986 37208327 + 0.880967869450431 NA promoter-TSS (NM_001290828) promoter-TSS (NM_001290828) 111 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding common_peak2_162_161_-0.2847070131602_7.19749649630452_0.880967869450431-2 chr5 91961717 91963520 + 0.880967869450431 NA promoter-TSS (NR_073442) promoter-TSS (NR_073442) -62 NR_073442 68098 Mm.159453 NM_026557 ENSMUSG00000029397 Rchy1 ARNIP|CHIMP|Pirh2|Zfp363|Znf363 ring finger and CHY zinc finger domain containing 1 protein-coding common_peak1_124_80_0.335050778448319_6.50737539210878_0.879913072296018 chr15 81086078 81087897 + 0.879913072296018 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 18060 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_97_102_-0.360197363390408_6.50640184548801_0.879913072295994-2 chr7 34312347 34313575 + 0.879913072295994 NA Intergenic Intergenic -27352 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding common_peak1_97_102_-0.360197363390408_6.50640184548801_0.879913072295994 chr11 31563168 31564118 + 0.879913072295994 NA Intergenic Intergenic 108219 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_97_102_-0.360197363390408_6.50640184548801_0.879913072295994 chr19 40894048 40895406 + 0.879913072295994 NA promoter-TSS (NM_028319) promoter-TSS (NM_028319) 22 NM_028319 72672 Mm.313523 NM_028319 ENSMUSG00000049164 Zfp518a 2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335 zinc finger protein 518A protein-coding common_peak2_62_70_-0.456376821257848_5.92155870887576_0.879826794357973 chr1 6288240 6289021 + 0.879826794357973 NA Intergenic MIR|SINE|MIR -70701 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak2_62_70_-0.456376821257848_5.92155870887576_0.879826794357973-2 chr8 84974621 84975547 + 0.879826794357973 NA TTS (NM_011563) TTS (NM_011563) 3664 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_84_52_0.394512321953887_5.92517661554014_0.879826794357961 chr14 25476365 25477033 + 0.879826794357961 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 17514 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_85_52_0.41126709607299_5.93355400259969_0.879826794357961 chr19 6941742 6942396 + 0.879826794357961 NA promoter-TSS (NM_001285453) promoter-TSS (NM_001285453) 208 NM_007522 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_85_52_0.41126709607299_5.93355400259969_0.879826794357961-2 chr3 103809677 103810296 + 0.879826794357961 NA promoter-TSS (NM_133865) promoter-TSS (NM_133865) 469 NM_026193 67489 Mm.197568 NM_026193 ENSMUSG00000032952 Ap4b1 1810038H16Rik|AV004952|Ap4b4 adaptor-related protein complex AP-4, beta 1 protein-coding common_peak1_85_52_0.41126709607299_5.93355400259969_0.879826794357961-3 chr9 31210840 31211720 + 0.879826794357961 NA intron (NM_001357698, intron 1 of 17) CpG 568 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding common_peak1_84_52_0.394512321953887_5.92517661554014_0.879826794357961-2 chr3 95675777 95676444 + 0.879826794357961 NA TTS (NM_144899) TTS (NM_144899) 11807 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441-3 chr11 116273595 116274059 + 0.879657821688441 NA intron (NM_146032, intron 1 of 15) CpG 390 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding common_peak2_52_30_0.491573744882985_5.19998318282837_0.879657821688441 chr17 17829499 17830099 + 0.879657821688441 NA promoter-TSS (NR_029730) promoter-TSS (NR_029730) -389 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA common_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-2 chr19 5817502 5818072 + 0.879657821688441 NA Intergenic Intergenic -15115 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_52_30_0.491573744882985_5.19998318282837_0.879657821688441-4 chr9 65294394 65294738 + 0.879657821688441 NA intron (NM_001044389, intron 1 of 12) CpG 306 NM_001044389 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding unique_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-3 chr8 116943443 116944204 + 0.879657821688441 NA intron (NM_177700, intron 1 of 3) CpG 430 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441-7 chr9 95192519 95193035 + 0.879657821688441 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 214493 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_52_30_0.491573744882985_5.19998318282837_0.879657821688441-2 chr7 119861126 119861716 + 0.879657821688441 NA intron (NM_001163703, intron 1 of 2) intron (NM_001163703, intron 1 of 2) 34037 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441 chr10 80757775 80758716 + 0.879657821688441 NA intron (NM_199322, intron 1 of 27) intron (NM_199322, intron 1 of 27) 3042 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441-5 chr5 33019027 33019448 + 0.879657821688441 NA intron (NM_011738, intron 1 of 1) CpG 421 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding common_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-5 chr8 84147385 84147879 + 0.879657821688441 NA promoter-TSS (NM_001163752) promoter-TSS (NM_001163752) 121 NM_145970 212139 Mm.41424 NM_145970 ENSMUSG00000036686 Cc2d1a BC016188|Freud-1|Tape coiled-coil and C2 domain containing 1A protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441-2 chr11 107548007 107548494 + 0.879657821688441 NA intron (NM_198298, intron 1 of 31) CpG-2765 290 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-6 chrX 96099881 96100363 + 0.879657821688441 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 4077 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441 chr2 173741469 173742426 + 0.879657821688441 NA intron (NM_019806, intron 1 of 5) intron (NM_019806, intron 1 of 5) 4376 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak2_53_30_0.518350540513285_5.21337158064352_0.879657821688441-2 chr8 22763630 22764004 + 0.879657821688441 NA intron (NM_008872, intron 1 of 13) intron (NM_008872, intron 1 of 13) 6095 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441-6 chr7 4137022 4137298 + 0.879657821688441 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 104 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding common_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-3 chr2 25272607 25273268 + 0.879657821688441 NA promoter-TSS (NM_023464) promoter-TSS (NM_023464) 471 NM_175300 99152 Mm.291624 NM_175300 ENSMUSG00000026965 Anapc2 9230107K09Rik|AL024279|Apc2|Emi4|Imi4|mKIAA1406 anaphase promoting complex subunit 2 protein-coding common_peak1_53_30_0.518350540513285_5.21337158064352_0.879657821688441-4 chr4 11322314 11322766 + 0.879657821688441 NA promoter-TSS (NM_001081201) promoter-TSS (NM_001081201) -409 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak2_52_30_0.491573744882985_5.19998318282837_0.879657821688441-3 chr8 61607246 61607898 + 0.879657821688441 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -16403 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-4 chr3 84443454 84443931 + 0.879657821688441 NA 3' UTR (NM_001205355, exon 12 of 12) 3' UTR (NM_001205355, exon 12 of 12) 35799 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441-2 chr8 61698063 61698761 + 0.879657821688441 NA intron (NM_001293772, intron 8 of 21) intron (NM_001293772, intron 8 of 21) 61686 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_53_30_0.518350540513285_5.21337158064352_0.879657821688441 chr17 32946746 32947323 + 0.879657821688441 NA intron (NM_130882, intron 1 of 12) intron (NM_130882, intron 1 of 12) 327 NM_130882 170716 Mm.254838 NM_130882 ENSMUSG00000024055 Cyp4f13 0610030I10Rik|Cypf13 cytochrome P450, family 4, subfamily f, polypeptide 13 protein-coding common_peak1_52_30_0.491573744882985_5.19998318282837_0.879657821688441 chr18 61058715 61059311 + 0.879657821688441 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 13863 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak1_35_44_-0.60014184765697_5.19178217250119_0.879657821688435 chr15 11769958 11770609 + 0.879657821688435 NA Intergenic Intergenic 135391 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_35_44_-0.60014184765697_5.19178217250119_0.879657821688435 chr2 137706216 137707134 + 0.879657821688435 NA Intergenic Intergenic -549909 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_35_44_-0.60014184765697_5.19178217250119_0.879657821688435-2 chr8 11366784 11367360 + 0.879657821688435 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -54246 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_128_130_-0.313399848673807_6.87672307720055_0.87964354507385 chr1 156222864 156224045 + 0.87964354507385 NA Intergenic Intergenic -18428 NM_177838 329274 Mm.150857 NM_177838 ENSMUSG00000015484 Fam163a A230106N23Rik family with sequence similarity 163, member A protein-coding common_peak2_106_111_-0.355188885028445_6.62976047954338_0.879562721798482 chr5 74093125 74093945 + 0.879562721798482 NA promoter-TSS (NR_031758) promoter-TSS (NR_031758) 5 NR_031758 100313943 Mm.46547 NR_031758 ENSMUSG00000093355 Snora26 MBI-6 small nucleolar RNA, H/ACA box 26 snoRNA common_peak2_135_88_0.319987467223566_6.63572716457818_0.879562721798482 chr11 120253158 120253727 + 0.879562721798482 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 20495 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_106_111_-0.355188885028445_6.62976047954338_0.879562721798482 chr8 13785387 13786371 + 0.879562721798482 NA exon (NM_025924, exon 1 of 9) exon (NM_025924, exon 1 of 9) 264 NM_025924 67031 Mm.44858 NM_025924 ENSMUSG00000038398 Upf3a 2600001C03Rik|4930546M19Rik|RENT3A|UPF3 UPF3 regulator of nonsense transcripts homolog A (yeast) protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-2 chr12 110796600 110797044 + 0.879255460030357 NA intron (NM_001347428, intron 2 of 2) intron (NM_001347428, intron 2 of 2) 44117 NM_011973 26448 Mm.140948 NM_011973 ENSMUSG00000056458 Mok RAGE1|Rage|Stk30 MOK protein kinase protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-6 chr15 100087829 100088098 + 0.879255460030357 NA intron (NR_037311, intron 2 of 3) intron (NR_037311, intron 2 of 3) 49299 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357 chr1 71760254 71760792 + 0.879255460030357 NA Intergenic Intergenic 107188 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-5 chr13 113614642 113614895 + 0.879255460030357 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 3796 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_28_14_0.675077405341992_4.24442929827952_0.879255460030357-2 chr3 32496393 32496757 + 0.879255460030357 NA Intergenic Intergenic -4606 NM_001195074 100502876 Mm.383358 NM_001195074 ENSMUSG00000091091 Kcnmb3 EG435726|Gm5707 potassium large conductance calcium-activated channel, subfamily M, beta member 3 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-5 chr14 76732047 76732340 + 0.879255460030357 NA Intergenic Intergenic -27938 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-8 chr7 128349222 128349462 + 0.879255460030357 NA Intergenic Intergenic -51211 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357 chr11 94935674 94936260 + 0.879255460030357 NA promoter-TSS (NM_007742) promoter-TSS (NM_007742) -257 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-13 chr8 77510551 77510804 + 0.879255460030357 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -6379 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-5 chr18 63463859 63464359 + 0.879255460030357 NA Intergenic Intergenic -76926 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding common_peak1_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-4 chr2 5316664 5317062 + 0.879255460030357 NA intron (NM_001290374, intron 5 of 9) intron (NM_001290374, intron 5 of 9) -62527 NR_030601 100124465 NR_030601 ENSMUSG00000078031 Mir466d Mirn466d microRNA 466d ncRNA common_peak2_28_14_0.675077405341992_4.24442929827952_0.879255460030357-3 chr4 49520708 49520979 + 0.879255460030357 NA promoter-TSS (NM_001289901) promoter-TSS (NM_001289901) 240 NM_178603 28028 Mm.30052 NM_178603 ENSMUSG00000044018 Mrpl50 AA408971|AI317351|D4Wsu125e mitochondrial ribosomal protein L50 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-6 chr2 167661239 167661538 + 0.879255460030357 NA exon (NM_145538, exon 1 of 6) exon (NM_145538, exon 1 of 6) 156 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak1_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-3 chr19 9899773 9900046 + 0.879255460030357 NA promoter-TSS (NM_016692) promoter-TSS (NM_016692) -376 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-8 chr2 151894610 151895241 + 0.879255460030357 NA Intergenic Intergenic -16282 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357 chr1 149916564 149917127 + 0.879255460030357 NA intron (NM_008869, intron 3 of 17) intron (NM_008869, intron 3 of 17) 5594 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-4 chr7 68668225 68668882 + 0.879255460030357 NA Intergenic Intergenic 50097 NR_003648 384639 Mm.261760 NM_001013781 Gm5334 EG384639 tetraspanin 7 pseudogene pseudo unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-11 chr4 64124903 64125265 + 0.879255460030357 NA Intergenic Intergenic -78069 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-3 chr15 84681711 84682050 + 0.879255460030357 NA intron (NM_146061, intron 1 of 7) intron (NM_146061, intron 1 of 7) 882 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-11 chr8 33898956 33899312 + 0.879255460030357 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 30729 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-7 chr3 19426680 19427062 + 0.879255460030357 NA Intergenic Intergenic -81724 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-4 chr16 32644319 32644733 + 0.879255460030357 NA promoter-TSS (NM_016788) promoter-TSS (NM_016788) -117 NM_001110147 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-7 chr5 64159683 64160154 + 0.879255460030357 NA promoter-TSS (NM_001310611) promoter-TSS (NM_001310611) -342 NM_019636 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-2 chr1 193402849 193403293 + 0.879255460030357 NA Intergenic Intergenic -32789 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_16_24_-0.826970352865029_4.23037101334221_0.879255460030357 chr12 80330152 80330400 + 0.879255460030357 NA Intergenic Intergenic 61401 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-12 chr8 108722654 108723049 + 0.879255460030357 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 8207 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-9 chr8 31840919 31841273 + 0.879255460030357 NA intron (NM_178591, intron 2 of 8) intron (NM_178591, intron 2 of 8) 77107 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-12 chr8 44765026 44765463 + 0.879255460030357 NA Intergenic Intergenic -184964 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-8 chr3 32496460 32496780 + 0.879255460030357 NA Intergenic Intergenic -4651 NM_001195074 100502876 Mm.383358 NM_001195074 ENSMUSG00000091091 Kcnmb3 EG435726|Gm5707 potassium large conductance calcium-activated channel, subfamily M, beta member 3 protein-coding common_peak1_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-5 chr6 125484101 125484333 + 0.879255460030357 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 10543 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-2 chr15 79437705 79438034 + 0.879255460030357 NA intron (NM_001359863, intron 2 of 10) intron (NM_001359863, intron 2 of 10) 3949 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-6 chr5 17746577 17747093 + 0.879255460030357 NA Intergenic Intergenic 89061 NM_001159555 12491 Mm.18628 NM_007643 ENSMUSG00000002944 Cd36 FAT|GPIV|Scarb3 CD36 molecule protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-3 chr12 80219132 80219415 + 0.879255460030357 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 41098 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-8 chrX 134059302 134059556 + 0.879255460030357 NA intron (NM_001359054, intron 1 of 14) CpG 253 NM_001359053 108062 Mm.67938 NM_133196 ENSMUSG00000031256 Cstf2 C630034J23Rik|Cstf64|mir-3112 cleavage stimulation factor, 3' pre-RNA subunit 2 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-4 chr13 13162612 13162986 + 0.879255460030357 NA Intergenic Intergenic -19917 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-7 chr16 24516391 24517014 + 0.879255460030357 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -12612 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-2 chr1 90232040 90232551 + 0.879255460030357 NA Intergenic Intergenic 28315 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-5 chr7 79282941 79283361 + 0.879255460030357 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 9885 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-10 chr3 144320551 144321025 + 0.879255460030357 NA Intergenic Intergenic -115533 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-10 chr7 42505314 42505762 + 0.879255460030357 NA intron (NM_001309388, intron 1 of 6) CpG 215 NM_001309389 434178 Mm.333810 NM_001309388 ENSMUSG00000092416 Zfp141 - zinc finger protein 141 protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357 chr1 72307408 72307844 + 0.879255460030357 NA 5' UTR (NM_001357520, exon 1 of 21) 5' UTR (NM_001357520, exon 1 of 21) 205 NM_001357519 22596 Mm.246952 NM_009533 ENSMUSG00000026187 Xrcc5 AI314015|CTC85|CTCBF|Ku80|Ku86 X-ray repair complementing defective repair in Chinese hamster cells 5 protein-coding common_peak2_28_14_0.675077405341992_4.24442929827952_0.879255460030357 chr2 165868682 165868943 + 0.879255460030357 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 9625 NM_001291158 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-3 chr13 42108029 42108575 + 0.879255460030357 NA intron (NM_007772, intron 2 of 8) intron (NM_007772, intron 2 of 8) 56281 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-7 chr9 22085601 22086235 + 0.879255460030357 NA promoter-TSS (NM_001253898) promoter-TSS (NM_001253898) -491 NM_001253897 26940 Mm.425568 NM_012029 ENSMUSG00000066839 Ecsit Sitpec ECSIT signalling integrator protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-14 chr9 54641698 54642056 + 0.879255460030357 NA intron (NM_053178, intron 2 of 13) intron (NM_053178, intron 2 of 13) 20008 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak2_28_14_0.675077405341992_4.24442929827952_0.879255460030357-4 chr6 17281291 17281623 + 0.879255460030357 NA exon (NM_001277756, exon 1 of 2) exon (NM_001277756, exon 1 of 2) 272 NM_016900 12390 Mm.396075 NM_016900 ENSMUSG00000000058 Cav2 AI447843 caveolin 2 protein-coding common_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-9 chr6 83115674 83116172 + 0.879255460030357 NA exon (NM_020619, exon 1 of 4) exon (NM_020619, exon 1 of 4) 417 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-9 chr3 96601148 96601484 + 0.879255460030357 NA exon (NM_001163170, exon 1 of 6) exon (NM_001163170, exon 1 of 6) 183 NM_001163170 280411 Mm.482147 NM_001163170 ENSMUSG00000049288 Lix1l D130027M04Rik Lix1-like protein-coding common_peak1_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-2 chr17 87459987 87460182 + 0.879255460030357 NA Intergenic Intergenic -13149 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-3 chr6 124662130 124662583 + 0.879255460030357 NA promoter-TSS (NM_145130) promoter-TSS (NM_145130) -748 NR_149320 14792 Mm.273915 NM_145130 ENSMUSG00000004270 Lpcat3 C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG lysophosphatidylcholine acyltransferase 3 protein-coding unique_peak2_16_24_-0.826970352865029_4.23037101334221_0.879255460030357-6 chr8 123753467 123753772 + 0.879255460030357 NA Intergenic Intergenic 19661 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA unique_peak1_28_14_0.675077405341992_4.24442929827952_0.879255460030357-4 chr13 96671271 96671665 + 0.879255460030357 NA promoter-TSS (NM_008255) promoter-TSS (NM_008255) -532 NM_008255 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak1_76_46_0.426245600493552_5.76771165192441_0.879126120438037 chrX 153498255 153499398 + 0.879126120438037 NA exon (NM_018798, exon 1 of 1) exon (NM_018798, exon 1 of 1) 594 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak2_55_63_-0.47535588578132_5.76232205710934_0.879126120438037 chr18 10029469 10030045 + 0.879126120438037 NA promoter-TSS (NM_001360884) promoter-TSS (NM_001360884) 56 NM_001360884 59025 Mm.329277 NM_021522 ENSMUSG00000047879 Usp14 2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375 ubiquitin specific peptidase 14 protein-coding common_peak2_41_50_-0.559890645952115_5.39248001899544_0.878852710448088-4 chr4 129542249 129542981 + 0.878852710448088 NA promoter-TSS (NM_008228) promoter-TSS (NM_008228) 31 NM_008228 433759 Mm.202504 NM_008228 ENSMUSG00000028800 Hdac1 HD1|Hdac1-ps|MommeD5|RPD3 histone deacetylase 1 protein-coding common_peak2_41_50_-0.559890645952115_5.39248001899544_0.878852710448088 chr15 63411035 63411750 + 0.878852710448088 NA Intergenic Intergenic 68216 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA common_peak2_41_50_-0.559890645952115_5.39248001899544_0.878852710448088-3 chr2 29125185 29125892 + 0.878852710448088 NA 5' UTR (NM_198033, exon 1 of 26) 5' UTR (NM_198033, exon 1 of 26) 546 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding common_peak1_41_50_-0.559890645952115_5.39248001899544_0.878852710448088 chr10 59909094 59909609 + 0.878852710448088 NA Intergenic Intergenic 29760 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_42_50_-0.526182811762063_5.40933393609046_0.878852710448088-2 chr3 37723472 37724019 + 0.878852710448088 NA intron (NM_198657, intron 1 of 2) intron (NM_198657, intron 1 of 2) 615 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_42_50_-0.526182811762063_5.40933393609046_0.878852710448088 chr17 44499744 44500285 + 0.878852710448088 NA intron (NR_073425, intron 5 of 5) (TC)n|Simple_repeat|Simple_repeat 236162 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_41_50_-0.559890645952115_5.39248001899544_0.878852710448088-2 chr17 27040644 27041056 + 0.878852710448088 NA Intergenic Intergenic 11591 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_42_50_-0.526182811762063_5.40933393609046_0.878852710448088 chr17 47266541 47267166 + 0.878852710448088 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 36623 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_60_35_0.477231067860564_5.40854053537259_0.878852710448081-4 chr4 62966458 62967178 + 0.878852710448081 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 1244 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak1_60_35_0.477231067860564_5.40854053537259_0.878852710448081 chr19 9106168 9106799 + 0.878852710448081 NA Intergenic Intergenic -18527 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_60_35_0.477231067860564_5.40854053537259_0.878852710448081-2 chr2 60962240 60962807 + 0.878852710448081 NA intron (NM_020296, intron 1 of 13) CpG 681 NM_020296 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_60_35_0.477231067860564_5.40854053537259_0.878852710448081-2 chr3 90490368 90491019 + 0.878852710448081 NA intron (NM_133854, intron 1 of 3) intron (NM_133854, intron 1 of 3) 320 NM_133854 20615 Mm.331182 NM_133854 ENSMUSG00000001018 Snapin 25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap SNAP-associated protein protein-coding unique_peak1_60_35_0.477231067860564_5.40854053537259_0.878852710448081 chr2 83714215 83714830 + 0.878852710448081 NA Intergenic Intergenic -9875 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_60_35_0.477231067860564_5.40854053537259_0.878852710448081 chr11 96973120 96973593 + 0.878852710448081 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 4332 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_60_35_0.477231067860564_5.40854053537259_0.878852710448081-4 chr5 113990134 113991070 + 0.878852710448081 NA intron (NM_198109, intron 1 of 14) intron (NM_198109, intron 1 of 14) 3155 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot protein phosphatase 1 protein-coding common_peak1_60_35_0.477231067860564_5.40854053537259_0.878852710448081-3 chr3 121710835 121711785 + 0.878852710448081 NA Intergenic L2c|LINE|L2 -12227 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_60_35_0.477231067860564_5.40854053537259_0.878852710448081-5 chr5 138132750 138133467 + 0.878852710448081 NA exon (NM_011757, exon 5 of 5) exon (NM_011757, exon 5 of 5) 16203 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak2_60_35_0.477231067860564_5.40854053537259_0.878852710448081-2 chr14 50924639 50925282 + 0.878852710448081 NA promoter-TSS (NM_133676) promoter-TSS (NM_133676) 11 NM_009687 11792 Mm.203 NM_009687 ENSMUSG00000035960 Apex1 APE|Apex|HAP1|Ref-1 apurinic/apyrimidinic endonuclease 1 protein-coding common_peak2_60_35_0.477231067860564_5.40854053537259_0.878852710448081-3 chr15 85634722 85635078 + 0.878852710448081 NA Intergenic CpG -53079 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_60_35_0.477231067860564_5.40854053537259_0.878852710448081-6 chr7 113168360 113168782 + 0.878852710448081 NA Intergenic Intergenic -26556 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_151_151_-0.292874018044927_7.10149050442112_0.877596001322272 chr15 96459507 96460797 + 0.877596001322272 NA intron (NM_028148, intron 1 of 14) CpG 691 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-3 chr13 15986870 15987271 + 0.876666802405043 NA intron (NR_155430, intron 1 of 3) intron (NR_155430, intron 1 of 3) -24781 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-2 chr16 94453286 94453531 + 0.876666802405043 NA intron (NM_009441, intron 37 of 45) intron (NM_009441, intron 37 of 45) 73221 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-18 chr2 109406835 109407092 + 0.876666802405043 NA Intergenic Intergenic 126225 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-28 chrX 133600891 133601150 + 0.876666802405043 NA intron (NM_001105245, intron 5 of 5) ID_B1|SINE|B4 -86760 NR_153117 102632590 Mm.403836 NR_153117 ENSMUSG00000096978 Gm26851 - predicted gene, 26851 ncRNA unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-7 chr13 42586397 42586812 + 0.876666802405043 NA Intergenic Intergenic -94195 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-3 chr11 88446847 88447213 + 0.876666802405043 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 94257 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-5 chr11 6417161 6417464 + 0.876666802405043 NA intron (NM_008907, intron 1 of 4) intron (NM_008907, intron 1 of 4) 1442 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-6 chr5 150911907 150912139 + 0.876666802405043 NA Intergenic Intergenic -40584 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-16 chr3 14611499 14611727 + 0.876666802405043 NA promoter-TSS (NM_001347206) promoter-TSS (NM_001347206) -357 NM_001099674 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-2 chr1 151340687 151341227 + 0.876666802405043 NA Intergenic Intergenic -3529 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043 chr11 4987083 4987403 + 0.876666802405043 NA intron (NM_001243044, intron 1 of 21) CpG 419 NM_001355660 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-13 chr19 32303525 32303975 + 0.876666802405043 NA intron (NM_144792, intron 2 of 9) Lx9|LINE|L1 45566 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-10 chr12 82192230 82192646 + 0.876666802405043 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 22422 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-26 chrX 12587909 12588252 + 0.876666802405043 NA intron (NM_027439, intron 1 of 8) CpG 321 NM_027439 70495 Mm.25148 NM_027439 ENSMUSG00000031007 Atp6ap2 (P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9|PRR ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-20 chr2 173272361 173272688 + 0.876666802405043 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 4009 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-18 chr4 89522101 89522428 + 0.876666802405043 NA Intergenic Intergenic -165934 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043 chr1 87849464 87849724 + 0.876666802405043 NA Intergenic Intergenic -3693 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-4 chr10 67897742 67898104 + 0.876666802405043 NA intron (NM_178679, intron 2 of 4) intron (NM_178679, intron 2 of 4) 14739 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-15 chr17 26609511 26609859 + 0.876666802405043 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 48173 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043 chr1 125433335 125433877 + 0.876666802405043 NA intron (NM_001205386, intron 2 of 12) intron (NM_001205386, intron 2 of 12) 2121 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-8 chr11 97956967 97957207 + 0.876666802405043 NA intron (NM_001163608, intron 2 of 13) intron (NM_001163608, intron 2 of 13) 29359 NM_028199 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-21 chr6 146946289 146946513 + 0.876666802405043 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) 8020 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-24 chr7 74337811 74338191 + 0.876666802405043 NA intron (NM_001038643, intron 4 of 10) intron (NM_001038643, intron 4 of 10) 216779 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043 chr1 150027025 150027352 + 0.876666802405043 NA Intergenic Intergenic -65898 NM_008869 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak1_12_20_-0.959724268750403_3.91245528840356_0.876666802405043 chr13 51763481 51763785 + 0.876666802405043 NA intron (NM_013660, intron 1 of 15) intron (NM_013660, intron 1 of 15) 30114 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-11 chr15 41732496 41732756 + 0.876666802405043 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -56369 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-13 chr15 83170720 83171059 + 0.876666802405043 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 1319 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-19 chr4 141536492 141536729 + 0.876666802405043 NA intron (NM_001347235, intron 1 of 14) CpG 1987 NM_001347235 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-6 chr19 28665215 28665767 + 0.876666802405043 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -12733 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-3 chr10 4079756 4080424 + 0.876666802405043 NA intron (NM_001170785, intron 20 of 27) intron (NM_001170785, intron 20 of 27) 107015 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-4 chr15 12203764 12203963 + 0.876666802405043 NA Intergenic Intergenic -1165 NM_001356498 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-14 chr19 42264880 42265194 + 0.876666802405043 NA intron (NM_027694, intron 2 of 4) intron (NM_027694, intron 2 of 4) 9298 NM_027694 71146 Mm.329851 NM_027694 ENSMUSG00000042532 Golga7b 4933417O08Rik|AI839934 golgi autoantigen, golgin subfamily a, 7B protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-6 chr11 59306264 59306667 + 0.876666802405043 NA promoter-TSS (NM_139298) promoter-TSS (NM_139298) -465 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-27 chr9 99128672 99129017 + 0.876666802405043 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 11367 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-23 chr8 45000022 45000443 + 0.876666802405043 NA intron (NM_001081286, intron 2 of 25) SYNREP_MM|Satellite|Satellite 50024 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-11 chr17 78881336 78881732 + 0.876666802405043 NA intron (NM_011163, intron 1 of 15) intron (NM_011163, intron 1 of 15) 1038 NM_011163 19106 Mm.378990 NM_011163 ENSMUSG00000024079 Eif2ak2 2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding common_peak1_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-3 chr18 75683289 75683541 + 0.876666802405043 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 14281 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-22 chr4 130667397 130667719 + 0.876666802405043 NA intron (NM_001356566, intron 1 of 17) intron (NM_001356566, intron 1 of 17) 4201 NM_001356564 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-8 chr13 114860899 114861280 + 0.876666802405043 NA intron (NM_008396, intron 16 of 29) intron (NM_008396, intron 16 of 29) 42852 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding unique_peak1_12_20_-0.959724268750403_3.91245528840356_0.876666802405043 chr16 33582027 33582280 + 0.876666802405043 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 63558 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-5 chr4 32615875 32616194 + 0.876666802405043 NA intron (NM_011997, intron 1 of 10) intron (NM_011997, intron 1 of 10) 564 NM_011997 26885 Mm.22279 NM_011997 ENSMUSG00000028282 Casp8ap2 D4Ertd659e|FLASH caspase 8 associated protein 2 protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-8 chr7 134263849 134264372 + 0.876666802405043 NA Intergenic Intergenic -39013 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-12 chr18 57197969 57198222 + 0.876666802405043 NA intron (NM_001001979, intron 4 of 24) intron (NM_001001979, intron 4 of 24) 65005 NM_001001979 70417 Mm.297863 NM_001001979 ENSMUSG00000024593 Megf10 3000002B06Rik|Gm331 multiple EGF-like-domains 10 protein-coding common_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-4 chr12 102293970 102294386 + 0.876666802405043 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 10537 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-25 chr9 51103383 51103809 + 0.876666802405043 NA promoter-TSS (NR_029654) promoter-TSS (NR_029654) 49 NR_029655 723849 NR_029655 ENSMUSG00000065492 Mir34b Mirn34b|mir-34b|mmu-mir-34b microRNA 34b ncRNA common_peak2_23_11_0.725913145724093_3.9479190735832_0.876666802405043-2 chr13 54575639 54575883 + 0.876666802405043 NA exon (NM_019968, exon 2 of 4) exon (NM_019968, exon 2 of 4) 748 NM_019968 56795 Mm.89484 NM_019968 ENSMUSG00000025870 Arl10 Arl10a|Arm1 ADP-ribosylation factor-like 10 protein-coding common_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-5 chr17 21909517 21910033 + 0.876666802405043 NA 5' UTR (NM_001256493, exon 1 of 5) 5' UTR (NM_001256493, exon 1 of 5) 151 NM_001256493 70081 Mm.245648 NM_001256493 ENSMUSG00000078546 Zfp995 2210404O09Rik zinc finger protein 995 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-14 chr17 5941499 5941868 + 0.876666802405043 NA intron (NR_151772, intron 1 of 25) CpG 403 NM_001113352 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-20 chr5 92729225 92729584 + 0.876666802405043 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 45969 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-23 chr5 24466136 24466734 + 0.876666802405043 NA intron (NM_001359881, intron 1 of 15) intron (NM_001359881, intron 1 of 15) 14258 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-25 chr8 105504468 105504859 + 0.876666802405043 NA Intergenic Intergenic -7761 NM_175160 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-9 chr11 98930888 98931313 + 0.876666802405043 NA Intergenic Intergenic -6596 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-6 chr12 52493458 52493800 + 0.876666802405043 NA Intergenic Intergenic -13020 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-19 chr2 125268627 125268931 + 0.876666802405043 NA Intergenic Intergenic 21264 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-17 chr4 59823755 59824094 + 0.876666802405043 NA intron (NM_172468, intron 1 of 8) intron (NM_172468, intron 1 of 8) 18274 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-7 chr7 80628894 80629219 + 0.876666802405043 NA intron (NM_173863, intron 3 of 14) intron (NM_173863, intron 3 of 14) -6961 NR_040343 100504375 Mm.322881 NR_040343 ENSMUSG00000084821 Gm15880 - predicted gene 15880 ncRNA unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-5 chr12 17881393 17881674 + 0.876666802405043 NA Intergenic Intergenic 190724 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_23_11_0.725913145724093_3.9479190735832_0.876666802405043-4 chr3 95227239 95227445 + 0.876666802405043 NA TTS (NR_108026) TTS (NR_108026) -1082 NM_172395 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-22 chr7 68017536 68017812 + 0.876666802405043 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 65417 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-26 chr8 113879137 113879396 + 0.876666802405043 NA Intergenic Intergenic -30427 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-10 chr15 63066283 63066700 + 0.876666802405043 NA Intergenic Intergenic 413117 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-21 chr3 95692863 95693255 + 0.876666802405043 NA Intergenic Intergenic -5142 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-16 chr19 28359410 28359736 + 0.876666802405043 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -318651 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-2 chr10 81424319 81424730 + 0.876666802405043 NA intron (NM_026756, intron 1 of 8) intron (NM_026756, intron 1 of 8) 2649 NM_008688 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding common_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-2 chr11 30985986 30986336 + 0.876666802405043 NA exon (NM_026527, exon 1 of 3) exon (NM_026527, exon 1 of 3) 204 NM_026527 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-9 chr15 38936318 38936544 + 0.876666802405043 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 2522 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-7 chr11 59334862 59335247 + 0.876666802405043 NA Intergenic Intergenic 28124 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-24 chr8 56893277 56893597 + 0.876666802405043 NA Intergenic Intergenic 342303 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak2_23_11_0.725913145724093_3.9479190735832_0.876666802405043 chr11 117962922 117963160 + 0.876666802405043 NA Intergenic Intergenic 6325 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_23_11_0.725913145724093_3.9479190735832_0.876666802405043-3 chr13 70803059 70803293 + 0.876666802405043 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 38635 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-4 chr11 120346831 120347105 + 0.876666802405043 NA TTS (NR_105900) TTS (NR_105900) 445 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-12 chr15 77192844 77193085 + 0.876666802405043 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) -39119 NM_001358771 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-3 chr11 60256153 60256447 + 0.876666802405043 NA intron (NM_001359810, intron 7 of 12) intron (NM_001359810, intron 7 of 12) -33719 NM_001358315 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding unique_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-15 chr2 30712371 30712815 + 0.876666802405043 NA Intergenic Intergenic -8617 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_23_11_0.725913145724093_3.9479190735832_0.876666802405043-17 chr19 40267269 40267718 + 0.876666802405043 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 4123 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_12_20_-0.959724268750403_3.91245528840356_0.876666802405043-2 chr11 70199979 70200235 + 0.876666802405043 NA Intergenic Intergenic -13803 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_88_94_-0.381548381931021_6.37908141736544_0.875975617067351 chr7 92740271 92741440 + 0.875975617067351 NA promoter-TSS (NM_029494) promoter-TSS (NM_029494) 604 NR_015510 666737 Mm.473620 NR_015510 ENSMUSG00000074024 4632427E13Rik AU015482 RIKEN cDNA 4632427E13 gene ncRNA common_peak2_278_263_-0.219328354924007_7.93472994189645_0.875880092688496 chr8 20296637 20297542 + 0.875880092688496 NA intron (NR_030708, intron 1 of 4) CpG 343 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_140_141_-0.302305193548417_6.99859452273047_0.875424290883621 chr2 30470079 30471936 + 0.875424290883621 NA Intergenic A-rich|Low_complexity|Low_complexity 3192 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_71_78_-0.419124479077642_6.09421850863828_0.875069397945667 chr3 122274436 122274916 + 0.875069397945667 NA intron (NM_153806, intron 1 of 6) CpG 262 NM_153806 99480 Mm.398647 NM_153806 ENSMUSG00000039756 Dnttip2 4930588M11Rik|AA408582|AU014960|HSU15552 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding common_peak1_71_78_-0.419124479077642_6.09421850863828_0.875069397945667 chr10 17576073 17577318 + 0.875069397945667 NA Intergenic Intergenic -146533 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_94_59_0.374874778117262_6.09432798466715_0.875069397945654 chr1 43826896 43827816 + 0.875069397945654 NA intron (NM_026430, intron 1 of 14) CpG 352 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak1_94_59_0.374874778117262_6.09432798466715_0.875069397945654 chr10 127288172 127289579 + 0.875069397945654 NA 5' UTR (NM_033072, exon 1 of 13) 5' UTR (NM_033072, exon 1 of 13) 143 NM_001347171 110962 Mm.372826 NM_033072 ENSMUSG00000025409 Mbd6 D10Wsu93e methyl-CpG binding domain protein 6 protein-coding common_peak1_104_66_0.359047424742243_6.24561290282889_0.874130521693817 chr17 17825602 17826290 + 0.874130521693817 NA Intergenic Intergenic -4242 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA common_peak1_80_86_-0.389561042721114_6.24816297448817_0.874130521693817 chr11 89187164 89187869 + 0.874130521693817 NA Intergenic Intergenic 113675 NM_001033266 217071 Mm.342127 NM_001033266 ENSMUSG00000072553 Gm525 - predicted gene 525 protein-coding common_peak2_104_66_0.359047424742243_6.24561290282889_0.874130521693817 chr5 145280587 145281198 + 0.874130521693817 NA Intergenic Intergenic -2451 NM_001081431 666311 Mm.260773 NM_001081431 ENSMUSG00000070420 Zscan25 EG666311|Zfp498 zinc finger and SCAN domain containing 25 protein-coding common_peak2_80_86_-0.389561042721114_6.24816297448817_0.874130521693817 chr12 69537548 69538898 + 0.874130521693817 NA Intergenic Intergenic 44805 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak1_80_86_-0.389561042721114_6.24816297448817_0.874130521693817-2 chr13 94358275 94359279 + 0.874130521693817 NA promoter-TSS (NM_009680) promoter-TSS (NM_009680) 146 NR_045619 328309 Mm.174191 NM_183205 ENSMUSG00000042857 Gm9776 A530089L17 predicted gene 9776 ncRNA common_peak1_98_103_-0.359593111089123_6.52064316259653_0.873590437885177 chr3 41195731 41196861 + 0.873590437885177 NA Intergenic Intergenic -113250 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_152_152_-0.292940760474535_7.11091746245538_0.873419757347037 chr8 126616784 126617819 + 0.873419757347037 NA Intergenic Intergenic -23865 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_165_163_-0.27628336330041_7.21941032296788_0.873160273477171 chr11 95085952 95087413 + 0.873160273477171 NA Intergenic Intergenic -9871 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_173_116_0.278328924448073_7.00952918180744_0.870956391174341 chr6 52158196 52160186 + 0.870956391174341 NA promoter-TSS (NM_001311118) promoter-TSS (NM_001311118) 667 NR_131181 105242658 Mm.372521 NR_131181 ENSMUSG00000087658 Hotairm1 Gm15051|Hoxaas1 Hoxa transcript antisense RNA, myeloid-specific 1 ncRNA common_peak1_141_142_-0.302305574644901_7.00871854945594_0.870956391174341 chr9 25252631 25253400 + 0.870956391174341 NA 5' UTR (NM_001359738, exon 1 of 13) 5' UTR (NM_001359738, exon 1 of 13) 123 NM_001359738 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak2_49_57_-0.495682132975263_5.61013992863994_0.87081905171081-2 chr13 5841023 5842227 + 0.87081905171081 NA Intergenic Intergenic 16467 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_69_41_0.451983590193798_5.61830921787566_0.87081905171081-4 chr9 114731265 114731996 + 0.87081905171081 NA intron (NM_026036, intron 1 of 3) intron (NM_026036, intron 1 of 3) 427 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding common_peak1_68_41_0.431371481244948_5.60800316340123_0.87081905171081 chr13 110397966 110399180 + 0.87081905171081 NA intron (NM_152804, intron 9 of 13) intron (NM_152804, intron 9 of 13) 3529 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak2_68_41_0.431371481244948_5.60800316340123_0.87081905171081-6 chr8 110997253 110997744 + 0.87081905171081 NA intron (NM_007916, intron 1 of 11) intron (NM_007916, intron 1 of 11) 325 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak2_49_57_-0.495682132975263_5.61013992863994_0.87081905171081-4 chr9 44233256 44233979 + 0.87081905171081 NA intron (NM_007619, intron 1 of 15) intron (NM_007619, intron 1 of 15) 429 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak1_69_41_0.451983590193798_5.61830921787566_0.87081905171081-2 chr7 28417877 28418334 + 0.87081905171081 NA intron (NM_175021, intron 2 of 12) intron (NM_175021, intron 2 of 12) 18086 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak2_68_41_0.431371481244948_5.60800316340123_0.87081905171081 chr11 82764377 82765052 + 0.87081905171081 NA promoter-TSS (NM_001291242) promoter-TSS (NM_001291242) 369 NM_025884 66983 Mm.29622 NM_025884 ENSMUSG00000046010 Zfp830 2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830 zinc finger protein 830 protein-coding common_peak2_49_57_-0.495682132975263_5.61013992863994_0.87081905171081-3 chr5 43782263 43782630 + 0.87081905171081 NA promoter-TSS (NM_001159963) promoter-TSS (NM_001159963) -297 NM_178729 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding common_peak1_69_41_0.451983590193798_5.61830921787566_0.87081905171081-3 chr9 14500714 14501335 + 0.87081905171081 NA promoter-TSS (NM_173433) promoter-TSS (NM_173433) 405 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding common_peak2_68_41_0.431371481244948_5.60800316340123_0.87081905171081-4 chr4 148040233 148041048 + 0.87081905171081 NA promoter-TSS (NM_001161798) promoter-TSS (NM_001161798) -549 NR_027809 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 methylenetetrahydrofolate reductase protein-coding common_peak1_49_57_-0.495682132975263_5.61013992863994_0.87081905171081 chr8 84021903 84022430 + 0.87081905171081 NA intron (NM_028877, intron 1 of 6) intron (NM_028877, intron 1 of 6) 692 NM_028877 74337 Mm.250943 NM_028877 ENSMUSG00000047986 Palm3 4432412L15Rik|AL024300 paralemmin 3 protein-coding common_peak2_68_41_0.431371481244948_5.60800316340123_0.87081905171081-5 chr6 117917072 117917724 + 0.87081905171081 NA 5' UTR (NM_001166427, exon 1 of 3) 5' UTR (NM_001166427, exon 1 of 3) 104 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak2_49_57_-0.495682132975263_5.61013992863994_0.87081905171081 chr11 87109297 87109977 + 0.87081905171081 NA promoter-TSS (NM_175563) promoter-TSS (NM_175563) 376 NM_025377 66140 Mm.45008 NM_025377 ENSMUSG00000020492 Ska2 1110001A07Rik|C78640|Fam33a spindle and kinetochore associated complex subunit 2 protein-coding common_peak1_69_41_0.451983590193798_5.61830921787566_0.87081905171081 chr13 51761972 51763128 + 0.87081905171081 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 31197 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_68_41_0.431371481244948_5.60800316340123_0.87081905171081-2 chr14 52103514 52104005 + 0.87081905171081 NA intron (NM_001360183, intron 1 of 8) CpG 262 NM_001360178 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak2_68_41_0.431371481244948_5.60800316340123_0.87081905171081-3 chr15 8098741 8099129 + 0.87081905171081 NA intron (NM_001358788, intron 2 of 3) CpG 274 NM_001358788 545085 Mm.321312 NM_001081402 ENSMUSG00000039828 Wdr70 4833422F06Rik WD repeat domain 70 protein-coding common_peak1_68_41_0.431371481244948_5.60800316340123_0.87081905171081-2 chr19 16325333 16325991 + 0.87081905171081 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -10658 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_214_146_0.252117124980458_7.32573090732659_0.870718666467367 chr2 32876348 32877922 + 0.870718666467367 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 1001 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_119_122_-0.326091919286599_6.77946854569594_0.870694021038238 chr9 69989101 69990384 + 0.870694021038238 NA intron (NM_001008238, intron 1 of 9) CpG 276 NM_001008238 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak2_86_53_0.400861121441253_5.95531806288409_0.870424345776646-2 chr16 55555487 55556339 + 0.870424345776646 NA Intergenic Intergenic 61182 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_63_71_-0.453994916371005_5.94292754325681_0.870424345776646 chr10 82814474 82815210 + 0.870424345776646 NA intron (NR_038042, intron 1 of 2) intron (NR_038042, intron 1 of 2) 2719 NR_038042 70003 Mm.48789 NR_038042 ENSMUSG00000056821 1700028I16Rik - RIKEN cDNA 1700028I16 gene ncRNA common_peak2_64_71_-0.431784907806565_5.95403254753903_0.870424345776646 chr7 16313455 16313938 + 0.870424345776646 NA exon (NM_133234, exon 3 of 4) exon (NM_133234, exon 3 of 4) 4113 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak2_63_71_-0.453994916371005_5.94292754325681_0.870424345776646-2 chr13 110906767 110908093 + 0.870424345776646 NA non-coding (NR_131193, exon 5 of 5) non-coding (NR_131193, exon 5 of 5) -3584 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_63_71_-0.453994916371005_5.94292754325681_0.870424345776646-3 chr4 108834369 108835442 + 0.870424345776646 NA promoter-TSS (NM_001356361) promoter-TSS (NM_001356361) 227 NM_025334 66073 Mm.159965 NM_025334 ENSMUSG00000028567 Txndc12 0610040B21Rik|ERp16|ERp19 thioredoxin domain containing 12 (endoplasmic reticulum) protein-coding common_peak2_86_53_0.400861121441253_5.95531806288409_0.870424345776646 chr14 54573834 54574393 + 0.870424345776646 NA intron (NM_010590, intron 1 of 7) intron (NM_010590, intron 1 of 7) 3548 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_64_71_-0.431784907806565_5.95403254753903_0.870424345776646 chr7 16313515 16314021 + 0.870424345776646 NA exon (NM_133234, exon 3 of 4) exon (NM_133234, exon 3 of 4) 4185 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak2_86_53_0.400861121441253_5.95531806288409_0.870424345776646-3 chr3 36474970 36475606 + 0.870424345776646 NA promoter-TSS (NM_028183) promoter-TSS (NM_028183) 236 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak2_244_168_0.238025646691262_7.51989225962781_0.870314359304819 chr11 74556158 74558887 + 0.870314359304819 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 32636 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_363_257_0.194805029886258_8.10862977036638_0.869524105364739 chr15 79050541 79052760 + 0.869524105364739 NA Intergenic Intergenic 9765 NM_015738 14429 Mm.390805 NM_015738 ENSMUSG00000114755 Galr3 Galnr3 galanin receptor 3 protein-coding common_peak1_30_39_-0.644423575761336_4.9997163070067_0.869438253311888-2 chr17 36951059 36951645 + 0.869438253311888 NA intron (NM_029632, intron 1 of 2) intron (NM_029632, intron 1 of 2) 440 NM_029632 76497 Mm.46176 NM_029632 ENSMUSG00000036398 Ppp1r11 1500041B02Rik|AV117883|Hcgv|Tcte5|Tctex-5|Tctex5 protein phosphatase 1, regulatory (inhibitor) subunit 11 protein-coding common_peak2_30_39_-0.644423575761336_4.9997163070067_0.869438253311888-3 chr8 70594150 70594812 + 0.869438253311888 NA promoter-TSS (NM_023627) promoter-TSS (NM_023627) 0 NM_023627 71780 Mm.29357 NM_023627 ENSMUSG00000019139 Isyna1 1300017C10Rik|AU018670 myo-inositol 1-phosphate synthase A1 protein-coding unique_peak2_30_39_-0.644423575761336_4.9997163070067_0.869438253311888 chr8 45576153 45576979 + 0.869438253311888 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -51185 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_30_39_-0.644423575761336_4.9997163070067_0.869438253311888-2 chr8 11391315 11391607 + 0.869438253311888 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -78635 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_30_39_-0.644423575761336_4.9997163070067_0.869438253311888 chr11 121672415 121673060 + 0.869438253311888 NA intron (NM_178664, intron 1 of 12) intron (NM_178664, intron 1 of 12) 414 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak1_31_39_-0.598943030242811_5.02245657976596_0.869438253311888 chr13 93997256 93997911 + 0.869438253311888 NA Intergenic Intergenic -60213 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-7 chr8 79398133 79398440 + 0.869438253311888 NA intron (NM_008539, intron 1 of 6) intron (NM_008539, intron 1 of 6) 1182 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888 chr13 80883615 80884617 + 0.869438253311888 NA intron (NM_001042591, intron 1 of 7) intron (NM_001042591, intron 1 of 7) 694 NM_001042591 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-3 chr4 57560408 57560907 + 0.869438253311888 NA Intergenic Intergenic -7591 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-6 chr8 75092906 75093259 + 0.869438253311888 NA promoter-TSS (NM_010442) promoter-TSS (NM_010442) -536 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-2 chr3 85971119 85971635 + 0.869438253311888 NA Intergenic CpG 31114 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-5 chr6 134091097 134091661 + 0.869438253311888 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 55679 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-2 chr15 77595241 77595986 + 0.869438253311888 NA intron (NM_177820, intron 1 of 3) intron (NM_177820, intron 1 of 3) 512 NM_177820 328561 Mm.379486 NM_177820 ENSMUSG00000050014 Apol10b 9130218O11Rik apolipoprotein L 10B protein-coding common_peak2_31_39_-0.598943030242811_5.02245657976596_0.869438253311888-4 chr4 139379776 139380343 + 0.869438253311888 NA promoter-TSS (NM_001160319) promoter-TSS (NM_001160319) -600 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding common_peak2_30_39_-0.644423575761336_4.9997163070067_0.869438253311888 chr5 140701843 140702339 + 0.869438253311888 NA intron (NM_001347517, intron 1 of 22) CpG 287 NM_028833 74239 Mm.179704 NM_028833 ENSMUSG00000036555 Iqce 1700028P05Rik|mKIAA1023 IQ motif containing E protein-coding unique_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882 chr15 97833617 97834102 + 0.869438253311882 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -2092 NM_001204276 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-6 chr15 77859278 77859836 + 0.869438253311882 NA Intergenic Intergenic -17382 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_46_26_0.518773801138586_5.01427440273276_0.869438253311882 chr11 75406235 75406823 + 0.869438253311882 NA TTS (NM_001102611) TTS (NM_001102611) 16094 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-4 chr13 8996269 8996884 + 0.869438253311882 NA promoter-TSS (NM_027000) promoter-TSS (NM_027000) -564 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding common_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-2 chr10 81182973 81183437 + 0.869438253311882 NA promoter-TSS (NM_007828) promoter-TSS (NM_007828) -58 NM_001190473 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_46_26_0.518773801138586_5.01427440273276_0.869438253311882-3 chr2 124858020 124858373 + 0.869438253311882 NA Intergenic Intergenic 204615 NM_199239 214968 Mm.330536 NM_172537 ENSMUSG00000027200 Sema6d 1110067B02Rik|AA409156|D330011G23|mKIAA1479 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding common_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-5 chr14 121237273 121237805 + 0.869438253311882 NA intron (NM_134082, intron 9 of 26) intron (NM_134082, intron 9 of 26) -11167 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-3 chr19 10194868 10195593 + 0.869438253311882 NA 3' UTR (NM_146094, exon 12 of 12) 3' UTR (NM_146094, exon 12 of 12) 3855 NR_105959 102465600 NR_105959 ENSMUSG00000098363 Mir6993 Gm27642|mmu-mir-6993 microRNA 6993 ncRNA unique_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-2 chr17 44239444 44240301 + 0.869438253311882 NA intron (NM_172621, intron 2 of 5) intron (NM_172621, intron 2 of 5) 51300 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg|nmf318 chloride intracellular channel 5 protein-coding common_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882 chr1 124488287 124489099 + 0.869438253311882 NA Intergenic MTEa|LTR|ERVL-MaLR -443134 NM_199021 269109 Mm.417716 NM_199021 ENSMUSG00000036815 Dpp10 6430601K09Rik|DPP X|Dprp3 dipeptidylpeptidase 10 protein-coding common_peak1_46_26_0.518773801138586_5.01427440273276_0.869438253311882-3 chr12 111907279 111907836 + 0.869438253311882 NA intron (NM_011625, intron 1 of 16) intron (NM_011625, intron 1 of 16) 498 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak2_46_26_0.518773801138586_5.01427440273276_0.869438253311882-2 chr2 102805309 102805850 + 0.869438253311882 NA Intergenic Intergenic -58819 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak1_187_126_0.270866657383401_7.12411801546387_0.86930367248664 chr14 31000700 31002091 + 0.86930367248664 NA promoter-TSS (NM_029626) promoter-TSS (NM_029626) 2 NM_001165930 76485 Mm.8766 NM_029626 ENSMUSG00000021916 Glt8d1 2410004H05Rik|5430414N14Rik|AI450005 glycosyltransferase 8 domain containing 1 protein-coding common_peak2_153_153_-0.293007068096956_7.12028300664642_0.86930367248664 chr12 111538202 111539347 + 0.86930367248664 NA intron (NM_178041, intron 2 of 11) CpG-3539 673 NM_173363 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak2_115_74_0.339039351308141_6.39833836614995_0.869135945698768-2 chr4 137993453 137994416 + 0.869135945698768 NA intron (NM_001256195, intron 1 of 34) intron (NM_001256195, intron 1 of 34) 478 NM_172703 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak2_115_74_0.339039351308141_6.39833836614995_0.869135945698768 chr14 99298755 99299841 + 0.869135945698768 NA intron (NM_009769, intron 1 of 3) CpG 607 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_77_47_0.414356296388168_5.79214064891524_0.8686265269944-4 chr4 141881752 141882893 + 0.8686265269944 NA Intergenic Intergenic -7402 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_56_64_-0.472368756255853_5.78618343490053_0.8686265269944 chr15 79454671 79455503 + 0.8686265269944 NA Intergenic Intergenic -12944 NM_001359863 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak1_77_47_0.414356296388168_5.79214064891524_0.8686265269944-2 chr14 76532399 76533301 + 0.8686265269944 NA TTS (NR_027699) TTS (NR_027699) -11995 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_77_47_0.414356296388168_5.79214064891524_0.8686265269944-3 chr3 9250571 9251549 + 0.8686265269944 NA 5' UTR (NM_177660, exon 1 of 6) 5' UTR (NM_177660, exon 1 of 6) 493 NM_177660 229055 Mm.103262 NM_177660 ENSMUSG00000069114 Zbtb10 4832414A18|AU021107|RINZF zinc finger and BTB domain containing 10 protein-coding common_peak1_77_47_0.414356296388168_5.79214064891524_0.8686265269944 chr13 4248387 4249374 + 0.8686265269944 NA TTS (NM_001013785) TTS (NM_001013785) 145 NR_028405 111002 Mm.482672 NR_028405 Marcksl1-ps4 Gm16264|Mlp-rs4|Mrp-rs4 MARCKS-like 1, pseudogene 4 pseudo common_peak1_77_47_0.414356296388168_5.79214064891524_0.8686265269944-5 chr6 131387161 131388398 + 0.8686265269944 NA intron (NM_011733, intron 1 of 8) intron (NM_011733, intron 1 of 8) 671 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding unique_peak1_77_47_0.414356296388168_5.79214064891524_0.8686265269944 chr16 32660767 32661683 + 0.8686265269944 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 6972 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak2_109_113_-0.341112692387047_6.66233366797122_0.868113382235588-2 chr7 120634729 120635886 + 0.868113382235588 NA exon (NM_025899, exon 1 of 14) exon (NM_025899, exon 1 of 14) 118 NM_025899 67003 Mm.334206 NM_025899 ENSMUSG00000030884 Uqcrc2 1500004O06Rik ubiquinol cytochrome c reductase core protein 2 protein-coding common_peak2_109_113_-0.341112692387047_6.66233366797122_0.868113382235588 chr10 119239186 119239967 + 0.868113382235588 NA intron (NM_027994, intron 1 of 14) CpG 479 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak1_390_359_-0.183318940561252_8.40019362604905_0.868033770613125 chr15 10712776 10715650 + 0.868033770613125 NA promoter-TSS (NM_030690) promoter-TSS (NM_030690) -115 NM_001356534 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_96_60_0.380873216848191_6.12117394598698_0.866757392601631 chr11 76589449 76590813 + 0.866757392601631 NA Intergenic Intergenic -12392 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_96_60_0.380873216848191_6.12117394598698_0.866757392601631 chr2 25607542 25608509 + 0.866757392601631 NA TTS (NM_029859) TTS (NM_029859) 421 NM_001024616 227624 Mm.29600 NM_001024616 ENSMUSG00000015087 Rabl6 B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf RAB, member RAS oncogene family-like 6 protein-coding common_peak1_95_60_0.366028349735876_6.11375151243082_0.866757392601631-2 chr19 55099560 55100328 + 0.866757392601631 NA promoter-TSS (NM_008149) promoter-TSS (NM_008149) -467 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT-1|GPAT1|P90 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak1_95_60_0.366028349735876_6.11375151243082_0.866757392601631 chr14 70153109 70154124 + 0.866757392601631 NA TTS (NM_001004155) TTS (NM_001004155) 175 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding common_peak1_95_60_0.366028349735876_6.11375151243082_0.866757392601631-3 chr3 68609729 68611357 + 0.866757392601631 NA intron (NM_001113421, intron 3 of 7) (GAAA)n|Simple_repeat|Simple_repeat 38175 NM_013928 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_72_79_-0.417512659321436_6.11317176522664_0.866757392601618-2 chr8 54609802 54610438 + 0.866757392601618 NA TTS (NM_133711) TTS (NM_133711) 9339 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak2_72_79_-0.417512659321436_6.11317176522664_0.866757392601618 chr4 62277515 62278584 + 0.866757392601618 NA Intergenic Intergenic -8380 NM_025286 20530 Mm.292539 NM_025286 ENSMUSG00000066152 Slc31a2 AI604396|CTR2 solute carrier family 31, member 2 protein-coding common_peak2_105_67_0.351252234446277_6.26308895847348_0.866645077876892 chr3 98379620 98380437 + 0.866645077876892 NA Intergenic URR1B|DNA|hAT-Charlie -2453 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_167_165_-0.276614694474032_7.23673208410991_0.865560408849042 chr11 58009165 58010891 + 0.865560408849042 NA intron (NM_028451, intron 1 of 18) CpG 964 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak1_43_51_-0.521264315544031_5.43980756036908_0.865433649227648 chr2 26148140 26148667 + 0.865433649227648 NA Intergenic Intergenic -7897 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak2_43_51_-0.521264315544031_5.43980756036908_0.865433649227648-4 chr6 43291781 43292613 + 0.865433649227648 NA Intergenic Intergenic 17357 NM_130869 18291 Mm.17715 NM_130869 ENSMUSG00000029736 Nobox OG2|Og2x NOBOX oogenesis homeobox protein-coding common_peak2_43_51_-0.521264315544031_5.43980756036908_0.865433649227648-2 chr17 74395649 74396171 + 0.865433649227648 NA intron (NM_001252478, intron 1 of 13) intron (NM_001252478, intron 1 of 13) 302 NM_144798 210148 Mm.243943 NM_144798 ENSMUSG00000024069 Slc30a6 9530029F08Rik|ZnT6 solute carrier family 30 (zinc transporter), member 6 protein-coding common_peak2_43_51_-0.521264315544031_5.43980756036908_0.865433649227648-3 chr4 44234281 44234868 + 0.865433649227648 NA Intergenic Intergenic -13307 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA common_peak2_43_51_-0.521264315544031_5.43980756036908_0.865433649227648 chr10 80320059 80320508 + 0.865433649227648 NA TTS (NM_008793) TTS (NM_008793) 265 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding common_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636-6 chr8 94306827 94307394 + 0.865433649227636 NA intron (NM_001357268, intron 14 of 20) intron (NM_001357268, intron 14 of 20) -17201 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA unique_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636-2 chr2 69377133 69378155 + 0.865433649227636 NA Intergenic Intergenic -2818 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636 chr10 75763793 75764618 + 0.865433649227636 NA 5' UTR (NM_172549, exon 1 of 37) 5' UTR (NM_172549, exon 1 of 37) 152 NM_172549 104248 Mm.257404 NM_172549 ENSMUSG00000020196 Cabin1 A330070M20Rik|Cain|Ppp3in calcineurin binding protein 1 protein-coding unique_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636 chr15 77068280 77068988 + 0.865433649227636 NA Intergenic Intergenic -15764 NR_108037 74303 Mm.444304 NR_108037 ENSMUSG00000097267 1700109K24Rik 4933425G21Rik RIKEN cDNA 1700109K24 gene ncRNA common_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636-5 chr6 30352165 30352765 + 0.865433649227636 NA Intergenic Intergenic 38555 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_61_36_0.460996173923832_5.43995145259087_0.865433649227636 chr16 20301889 20302309 + 0.865433649227636 NA intron (NM_001005767, intron 1 of 9) CpG 263 NM_001005767 381038 Mm.371737 NM_001005767 ENSMUSG00000033918 Parl D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl presenilin associated, rhomboid-like protein-coding common_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636-3 chr11 79646795 79647238 + 0.865433649227636 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -23853 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636-4 chr14 120911201 120912195 + 0.865433649227636 NA intron (NM_023579, intron 1 of 25) CpG 504 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding common_peak2_61_36_0.460996173923832_5.43995145259087_0.865433649227636-3 chr3 93026090 93026958 + 0.865433649227636 NA Intergenic Intergenic -7463 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding common_peak2_61_36_0.460996173923832_5.43995145259087_0.865433649227636-2 chr19 41995214 41996116 + 0.865433649227636 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 13902 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak1_61_36_0.460996173923832_5.43995145259087_0.865433649227636-2 chr11 59347785 59348677 + 0.865433649227636 NA Intergenic Intergenic 27422 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak2_21_29_-0.720660213438214_4.54656048888941_0.865287499821613 chr5 29378630 29378985 + 0.865287499821613 NA promoter-TSS (NM_020295) promoter-TSS (NM_020295) -417 NM_020295 56873 Mm.41572 NM_020295 ENSMUSG00000010721 Lmbr1 1110048D14Rik|AU017641 limb region 1 protein-coding common_peak1_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-3 chr6 34708778 34709180 + 0.865287499821613 NA promoter-TSS (NM_145575) promoter-TSS (NM_145575) -465 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-4 chr7 25785629 25786099 + 0.865287499821613 NA exon (NM_001190974, exon 4 of 19) exon (NM_001190974, exon 4 of 19) 2869 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak2_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-2 chr19 9899738 9900154 + 0.865287499821613 NA promoter-TSS (NM_016692) promoter-TSS (NM_016692) -413 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak2_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-5 chr7 101838075 101838491 + 0.865287499821613 NA promoter-TSS (NM_001122739) promoter-TSS (NM_001122739) -57 NM_010567 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak2_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-3 chr3 38043961 38044389 + 0.865287499821613 NA Intergenic Intergenic 145362 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_21_29_-0.720660213438214_4.54656048888941_0.865287499821613 chr19 9078149 9078554 + 0.865287499821613 NA Intergenic Intergenic 9605 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-4 chr8 119813972 119814219 + 0.865287499821613 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 26484 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_21_29_-0.720660213438214_4.54656048888941_0.865287499821613 chr14 66105949 66106331 + 0.865287499821613 NA intron (NM_007940, intron 5 of 18) intron (NM_007940, intron 5 of 18) 4520 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak1_21_29_-0.720660213438214_4.54656048888941_0.865287499821613-2 chr4 140699988 140700341 + 0.865287499821613 NA Intergenic Intergenic -1309 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding common_peak2_34_18_0.603428479102218_4.54964175299469_0.86528749982161-5 chr4 107923202 107923467 + 0.86528749982161 NA exon (NM_009949, exon 1 of 5) exon (NM_009949, exon 1 of 5) 255 NM_009949 12896 Mm.307620 NM_009949 ENSMUSG00000028607 Cpt2 AI323697|CPTII carnitine palmitoyltransferase 2 protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-5 chr2 130819239 130819588 + 0.86528749982161 NA intron (NM_029432, intron 3 of 36) intron (NM_029432, intron 3 of 36) -15312 NR_024097 100043766 Mm.447040 NR_024097 Gm14057 - Ppp1r14c pseudogene pseudo common_peak2_34_18_0.603428479102218_4.54964175299469_0.86528749982161-2 chr11 96992501 96992886 + 0.86528749982161 NA Intergenic Intergenic -15005 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-2 chr11 78080134 78080615 + 0.86528749982161 NA promoter-TSS (NM_022313) promoter-TSS (NM_022313) 9 NM_022313 57837 Mm.21096 NM_022313 ENSMUSG00000020832 Eral1 2610524P08Rik|9130407C09Rik|AU019798|Era|M-ERA|MERA-S|MERA-W Era (G-protein)-like 1 (E. coli) protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-7 chr7 66660960 66661600 + 0.86528749982161 NA intron (NM_080443, intron 4 of 5) (A)n|Simple_repeat|Simple_repeat 28281 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_34_18_0.603428479102218_4.54964175299469_0.86528749982161 chr10 4107570 4107953 + 0.86528749982161 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 105359 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-9 chr5 121593100 121593504 + 0.86528749982161 NA intron (NM_009656, intron 1 of 12) CpG 522 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-3 chr16 78531586 78532029 + 0.86528749982161 NA Intergenic Intergenic -28509 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_34_18_0.603428479102218_4.54964175299469_0.86528749982161-4 chr4 11965989 11966270 + 0.86528749982161 NA promoter-TSS (NR_040577) promoter-TSS (NR_040577) -148 NM_001290391 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-8 chr2 167348805 167349108 + 0.86528749982161 NA exon (NM_019835, exon 1 of 9) exon (NM_019835, exon 1 of 9) 222 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-2 chr15 102243866 102244310 + 0.86528749982161 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 2412 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161 chr14 20139925 20140388 + 0.86528749982161 NA TTS (NM_021542) TTS (NM_021542) 41626 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-11 chr7 64275434 64275817 + 0.86528749982161 NA Intergenic Intergenic -12045 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_34_18_0.603428479102218_4.54964175299469_0.86528749982161-3 chr3 121474408 121474761 + 0.86528749982161 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 48043 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-3 chr12 113150506 113150892 + 0.86528749982161 NA Intergenic Intergenic -1313 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-8 chr8 9975935 9976241 + 0.86528749982161 NA 5' UTR (NM_176953, exon 1 of 2) 5' UTR (NM_176953, exon 1 of 2) 235 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-7 chr19 8977900 8978247 + 0.86528749982161 NA exon (NM_026007, exon 10 of 10) exon (NM_026007, exon 10 of 10) 11032 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-10 chr7 15949085 15949432 + 0.86528749982161 NA 3' UTR (NM_153068, exon 6 of 6) 3' UTR (NM_153068, exon 6 of 6) -3150 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Nop53 5330430H08Rik|9430097C02Rik|AU041936|AW536441|Gltscr2|PICT-1|R74911 NOP53 ribosome biogenesis factor protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-6 chr18 33907774 33908044 + 0.86528749982161 NA intron (NM_013512, intron 3 of 23) intron (NM_013512, intron 3 of 23) 99297 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding common_peak2_34_18_0.603428479102218_4.54964175299469_0.86528749982161-6 chr5 92841141 92841418 + 0.86528749982161 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 31897 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-4 chr2 35109562 35109887 + 0.86528749982161 NA intron (NM_012018, intron 1 of 43) CpG 232 NM_012018 26920 Mm.231332 NM_012018 ENSMUSG00000057110 Cntrl 6720467O09Rik|AA968343|Cep1|Cep110|IB3/5|Ma2a8|b2b1468.1Clo|b2b1468Clo centriolin protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-5 chr15 71863660 71864103 + 0.86528749982161 NA intron (NM_027174, intron 44 of 63) intron (NM_027174, intron 44 of 63) -136043 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-6 chr2 131234220 131234680 + 0.86528749982161 NA intron (NM_144888, intron 1 of 6) CpG 387 NM_144888 228607 Mm.287226 NM_144888 ENSMUSG00000037523 Mavs D430028G21Rik|IPS-1|Visa|cardif mitochondrial antiviral signaling protein protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-12 chr9 88481163 88481531 + 0.86528749982161 NA intron (NM_001284328, intron 1 of 11) CpG 1050 NM_001311113 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-9 chr8 120565299 120565751 + 0.86528749982161 NA intron (NM_001145896, intron 3 of 15) intron (NM_001145896, intron 3 of 15) 23550 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-4 chr14 20928569 20929072 + 0.86528749982161 NA promoter-TSS (NM_009502) promoter-TSS (NM_009502) -578 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161 chr11 18590330 18590581 + 0.86528749982161 NA Intergenic Intergenic 428514 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak1_34_18_0.603428479102218_4.54964175299469_0.86528749982161-10 chr9 66990404 66990773 + 0.86528749982161 NA Intergenic Intergenic -15104 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak2_154_154_-0.293072946540821_7.12958793200383_0.865246454137093 chr5 112279017 112280866 + 0.865246454137093 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 3250 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_36_45_-0.592601214999571_5.22726134855723_0.864252281539337 chr1 135861531 135861928 + 0.864252281539337 NA Intergenic Intergenic 20868 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337-4 chr17 3326600 3327188 + 0.864252281539337 NA intron (NM_001122998, intron 1 of 26) CpG 321 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337-7 chr9 44334936 44335600 + 0.864252281539337 NA 3' UTR (NM_010436, exon 1 of 1) 3' UTR (NM_010436, exon 1 of 1) 553 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding common_peak1_36_45_-0.592601214999571_5.22726134855723_0.864252281539337-2 chr17 13923876 13924494 + 0.864252281539337 NA Intergenic Intergenic -24188 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding common_peak1_36_45_-0.592601214999571_5.22726134855723_0.864252281539337-4 chr8 94711190 94711904 + 0.864252281539337 NA Intergenic Intergenic -15305 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337-5 chr2 93849376 93849918 + 0.864252281539337 NA 5' UTR (NM_183220, exon 1 of 15) 5' UTR (NM_183220, exon 1 of 15) 152 NM_183220 329470 Mm.486910 NM_183220 ENSMUSG00000040272 Accs 2610203E10Rik|Phacs 1-aminocyclopropane-1-carboxylate synthase (non-functional) protein-coding unique_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337 chr8 110716301 110716964 + 0.864252281539337 NA intron (NR_151675, intron 17 of 17) intron (NR_151675, intron 17 of 17) -4844 NM_198625 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337-3 chr12 17729023 17729599 + 0.864252281539337 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 38502 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337-6 chr2 137663674 137664446 + 0.864252281539337 NA Intergenic Intergenic -547540 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337 chr1 10169361 10170214 + 0.864252281539337 NA intron (NM_001102430, intron 21 of 37) intron (NM_001102430, intron 21 of 37) 62883 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_37_45_-0.554398501511866_5.24636270530108_0.864252281539337-2 chr11 96943660 96944472 + 0.864252281539337 NA promoter-TSS (NR_003293) promoter-TSS (NR_003293) -47 NM_134021 103711 Mm.254704 NM_134021 ENSMUSG00000018659 Pnpo AI415282 pyridoxine 5'-phosphate oxidase protein-coding common_peak1_36_45_-0.592601214999571_5.22726134855723_0.864252281539337-3 chr8 31519805 31520684 + 0.864252281539337 NA Intergenic Intergenic 152495 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_54_31_0.498832301350939_5.24941615067547_0.864252281539331 chr5 136622713 136623502 + 0.864252281539331 NA Intergenic Intergenic -55617 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_54_31_0.498832301350939_5.24941615067547_0.864252281539331-2 chr10 88826139 88826736 + 0.864252281539331 NA intron (NM_175158, intron 1 of 61) intron (NM_175158, intron 1 of 61) 377 NM_175158 70683 Mm.29631 NM_175158 ENSMUSG00000004356 Utp20 3830408P06Rik|AA617408|Drim|mDRIM|mDRIN UTP20 small subunit processome component protein-coding common_peak1_54_31_0.498832301350939_5.24941615067547_0.864252281539331 chr1 58504382 58504833 + 0.864252281539331 NA intron (NM_008765, intron 1 of 17) CpG 502 NM_001271526 18393 Mm.3411 NM_008765 ENSMUSG00000026037 Orc2 AU041563|Orc2l origin recognition complex, subunit 2 protein-coding common_peak2_54_31_0.498832301350939_5.24941615067547_0.864252281539331 chr15 86067624 86068155 + 0.864252281539331 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 9162 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_54_31_0.498832301350939_5.24941615067547_0.864252281539331-4 chr7 135537874 135538737 + 0.864252281539331 NA intron (NM_001316678, intron 1 of 19) CpG 481 NM_001316678 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_54_31_0.498832301350939_5.24941615067547_0.864252281539331-2 chr3 50001988 50002428 + 0.864252281539331 NA Intergenic Intergenic -244892 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak1_54_31_0.498832301350939_5.24941615067547_0.864252281539331-3 chr11 97800400 97800905 + 0.864252281539331 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 1087 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding unique_peak2_2_4_-0.989887509722379_1.82698434002617_0.864171920961574-2 chr13 64007616 64007855 + 0.864171920961574 NA Intergenic MER5A|DNA|hAT-Charlie 81466 NM_008291 15487 Mm.5109 NM_008291 ENSMUSG00000033122 Hsd17b3 - hydroxysteroid (17-beta) dehydrogenase 3 protein-coding unique_peak2_4_4_-0.2581211927692_2.19286749850276_0.864171920961574-3 chr18 31789880 31790093 + 0.864171920961574 NA intron (NM_027002, intron 1 of 3) PB1|SINE|Alu 861 NM_027002 69241 Mm.279898 NM_027002 ENSMUSG00000024258 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D protein-coding unique_peak2_2_4_-0.989887509722379_1.82698434002617_0.864171920961574-4 chr4 136116323 136116567 + 0.864171920961574 NA Intergenic MTE2b|LTR|ERVL-MaLR -27377 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak2_2_4_-0.989887509722379_1.82698434002617_0.864171920961574-5 chr5 65439486 65439685 + 0.864171920961574 NA Intergenic Intergenic -3743 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding unique_peak2_4_4_-0.2581211927692_2.19286749850276_0.864171920961574-4 chr3 68510103 68510305 + 0.864171920961574 NA intron (NM_001113421, intron 2 of 7) L1_Mus1|LINE|L1 16023 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding unique_peak2_4_4_-0.2581211927692_2.19286749850276_0.864171920961574-5 chr7 89641654 89641923 + 0.864171920961574 NA intron (NM_181407, intron 1 of 13) L1Md_F2|LINE|L1 8970 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_3_4_-0.577778091523078_2.03303904912582_0.864171920961574 chr2 35881659 35881851 + 0.864171920961574 NA intron (NM_029774, intron 6 of 9) B4A|SINE|B4 62565 NR_040618 77665 Mm.400558 NR_040618 ENSMUSG00000086449 9030204H09Rik - RIKEN cDNA 9030204H09 gene ncRNA unique_peak2_2_4_-0.989887509722379_1.82698434002617_0.864171920961574 chr10 24449095 24449308 + 0.864171920961574 NA Intergenic ID_B1|SINE|B4 -146241 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_3_4_-0.577778091523078_2.03303904912582_0.864171920961574-2 chr2 148855051 148855262 + 0.864171920961574 NA Intergenic Intergenic -4222 NM_029960 77705 Mm.159975 NM_029960 ENSMUSG00000027446 9230104L09Rik mCST E2 RIKEN cDNA 9230104L09 gene protein-coding unique_peak2_4_3_0.0638069021181624_2.03190345105908_0.864171920961574 chr3 121648816 121649123 + 0.864171920961574 NA Intergenic B4|SINE|B4 -2516 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak2_4_4_-0.2581211927692_2.19286749850276_0.864171920961574-2 chr12 111902603 111902812 + 0.864171920961574 NA intron (NM_011625, intron 1 of 16) intron (NM_011625, intron 1 of 16) 5348 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding unique_peak2_4_4_-0.2581211927692_2.19286749850276_0.864171920961574 chr1 12714245 12714482 + 0.864171920961574 NA intron (NM_001198566, intron 1 of 20) B1_Mus2|SINE|Alu -4182 NM_172294 240725 Mm.45563 NM_172294 ENSMUSG00000016918 Sulf1 AI467640|AW121680|mKIAA1077 sulfatase 1 protein-coding unique_peak2_2_4_-0.989887509722379_1.82698434002617_0.864171920961574-6 chr8 94834144 94834361 + 0.864171920961574 NA intron (NM_134141, intron 1 of 8) B2_Mm1t|SINE|B2 4088 NM_134141 109006 Mm.27582 NM_134141 ENSMUSG00000031781 Ciapin1 2810413N20Rik|AA617265|AU021794|anamorsin cytokine induced apoptosis inhibitor 1 protein-coding unique_peak2_4_4_-0.2581211927692_2.19286749850276_0.864171920961574-6 chr8 79693013 79693221 + 0.864171920961574 NA intron (NR_152614, intron 10 of 17) intron (NR_152614, intron 10 of 17) 18623 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|RNS4I|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding unique_peak2_3_4_-0.577778091523078_2.03303904912582_0.864171920961574 chr1 36129961 36130166 + 0.864171920961574 NA Intergenic MTEa|LTR|ERVL-MaLR 14250 NR_105862 102465540 NR_105862 ENSMUSG00000098752 Mir6897 Gm27652|mmu-mir-6897 microRNA 6897 ncRNA unique_peak2_2_4_-0.989887509722379_1.82698434002617_0.864171920961574-3 chr4 59897546 59897798 + 0.864171920961574 NA intron (NM_172468, intron 8 of 8) L2c|LINE|L2 17384 NM_021053 30936 Mm.284433 NM_021053 ENSMUSG00000028386 Slc46a2 5430429N04Rik|Ly110|TSO-1C12|Tscot solute carrier family 46, member 2 protein-coding common_peak1_246_170_0.232699110750079_7.53420207026094_0.864162095643898 chr1 132298020 132299728 + 0.864162095643898 NA 5' UTR (NM_144810, exon 1 of 5) 5' UTR (NM_144810, exon 1 of 5) 248 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_208_201_-0.246967649400627_7.53472765805148_0.864162095643898 chr15 77890318 77892220 + 0.864162095643898 NA Intergenic Intergenic 37725 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-2 chr1 180813125 180813510 + 0.863762398024911 NA intron (NM_008210, intron 1 of 3) CpG 288 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding unique_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-2 chr8 22692520 22693109 + 0.863762398024911 NA intron (NM_001159774, intron 4 of 21) intron (NM_001159774, intron 4 of 21) 13769 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak2_40_22_0.554452591116669_4.80078825161535_0.863762398024911-4 chr5 139010437 139010701 + 0.863762398024911 NA Intergenic Intergenic -15616 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911-2 chr2 137422737 137423423 + 0.863762398024911 NA Intergenic Intergenic -306560 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-7 chr8 12995152 12995813 + 0.863762398024911 NA intron (NM_001159486, intron 5 of 29) intron (NM_001159486, intron 5 of 29) -30552 NM_010172 14068 Mm.4827 NM_010172 ENSMUSG00000031443 F7 AI132620|Cf7|FVII coagulation factor VII protein-coding common_peak1_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-2 chr8 124196616 124196955 + 0.863762398024911 NA Intergenic Intergenic -34609 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-4 chr11 106779059 106779494 + 0.863762398024911 NA non-coding (NR_027785, exon 1 of 8) non-coding (NR_027785, exon 1 of 8) 190 NM_001353435 50776 Mm.859 NM_015810 ENSMUSG00000020718 Polg2 mtPolB|p55|polG-beta polymerase (DNA directed), gamma 2, accessory subunit protein-coding common_peak2_40_22_0.554452591116669_4.80078825161535_0.863762398024911-5 chr8 71275820 71276269 + 0.863762398024911 NA intron (NM_001142322, intron 1 of 39) intron (NM_001142322, intron 1 of 39) 3330 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911-3 chr9 50603033 50603720 + 0.863762398024911 NA promoter-TSS (NM_013897) promoter-TSS (NM_013897) 473 NM_025848 66925 Mm.10406 NM_025848 ENSMUSG00000000171 Sdhd 3110001M13Rik|AVLL5809|C78570|PRO19626 succinate dehydrogenase complex, subunit D, integral membrane protein protein-coding common_peak2_40_22_0.554452591116669_4.80078825161535_0.863762398024911-2 chr18 6135581 6135922 + 0.863762398024911 NA intron (NM_001039692, intron 1 of 18) CpG 347 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding unique_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911 chr8 8991153 8991714 + 0.863762398024911 NA Intergenic Intergenic 140855 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA common_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911 chr10 77136155 77136689 + 0.863762398024911 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -22717 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_40_22_0.554452591116669_4.80078825161535_0.863762398024911-3 chr4 21879736 21880118 + 0.863762398024911 NA promoter-TSS (NM_001356348) promoter-TSS (NM_001356348) 74 NM_001356348 230027 Mm.5662 NM_172687 ENSMUSG00000028247 Coq3 4732433J24|C77934 coenzyme Q3 methyltransferase protein-coding common_peak2_40_22_0.554452591116669_4.80078825161535_0.863762398024911 chr17 35896823 35897301 + 0.863762398024911 NA TTS (NM_001142744) TTS (NM_001142744) 316 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-6 chr7 67470900 67471643 + 0.863762398024911 NA Intergenic Intergenic -98413 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-3 chr11 94936540 94937259 + 0.863762398024911 NA intron (NM_007742, intron 1 of 50) intron (NM_007742, intron 1 of 50) 675 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding unique_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911-2 chr8 68062537 68063019 + 0.863762398024911 NA Intergenic Intergenic -88204 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_26_34_-0.649681186471564_4.80444242370918_0.863762398024911 chr15 78831960 78832426 + 0.863762398024911 NA Intergenic Intergenic -10454 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911 chr1 54438673 54439164 + 0.863762398024911 NA 5' UTR (NM_001033194, exon 1 of 18) 5' UTR (NM_001033194, exon 1 of 18) 108 NM_001033194 98488 Mm.25856 NM_001033194 ENSMUSG00000041303 Gtf3c3 TF3C-gamma|TFIIIC102 general transcription factor IIIC, polypeptide 3 protein-coding unique_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911 chr15 11780022 11780484 + 0.863762398024911 NA Intergenic Intergenic 125421 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911-3 chr4 134985668 134986267 + 0.863762398024911 NA Intergenic Intergenic 54987 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak2_26_34_-0.649681186471564_4.80444242370918_0.863762398024911-5 chr18 33293367 33293723 + 0.863762398024911 NA Intergenic Intergenic -79683 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak1_40_22_0.554452591116669_4.80078825161535_0.863762398024911-4 chr6 29164299 29164675 + 0.863762398024911 NA intron (NM_133925, intron 1 of 18) intron (NM_133925, intron 1 of 18) 237 NM_133925 68272 Mm.40802 NM_026650 ENSMUSG00000029701 Rbm28 2810480G15Rik|AI503051 RNA binding motif protein 28 protein-coding common_peak2_194_189_-0.257934892040989_7.44088816231045_0.863315349014221 chr18 61555288 61557117 + 0.863315349014221 NA intron (NM_001357498, intron 1 of 10) intron (NM_001357498, intron 1 of 10) 929 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak2_446_320_0.173848532057175_8.41335375315089_0.863039118156165 chr9 69453755 69457983 + 0.863039118156165 NA intron (NM_007585, intron 1 of 12) intron (NM_007585, intron 1 of 12) -1075 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak1_138_91_0.303415095326073_6.67526950372005_0.862557343927818 chr15 76510632 76511847 + 0.862557343927818 NA intron (NM_010046, intron 1 of 16) intron (NM_010046, intron 1 of 16) 755 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak1_117_75_0.34441859230585_6.42013680959651_0.862457503322505 chr7 84545349 84546723 + 0.862457503322505 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 17082 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_91_96_-0.364114519964117_6.41785558220507_0.862457503322505 chr8 69995446 69996266 + 0.862457503322505 NA intron (NM_001286450, intron 1 of 12) CpG 528 NM_001286450 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_116_75_0.332226885893193_6.41404095639018_0.862457503322505 chr9 106684822 106685983 + 0.862457503322505 NA 5' UTR (NM_011573, exon 1 of 6) 5' UTR (NM_011573, exon 1 of 6) 414 NM_011573 21767 Mm.22266 NM_011573 ENSMUSG00000040813 Tex264 TEG-264 testis expressed gene 264 protein-coding common_peak2_117_75_0.34441859230585_6.42013680959651_0.862457503322505 chr1 55086823 55087874 + 0.862457503322505 NA promoter-TSS (NM_008303) promoter-TSS (NM_008303) 584 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak2_117_75_0.34441859230585_6.42013680959651_0.862457503322505-2 chr12 71887056 71888442 + 0.862457503322505 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) -1794 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_91_96_-0.364114519964117_6.41785558220507_0.862457503322505-2 chr8 72219740 72220294 + 0.862457503322505 NA exon (NM_026455, exon 2 of 4) exon (NM_026455, exon 2 of 4) 287 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding common_peak1_175_118_0.270247680142629_7.02994160337926_0.862226257692557 chr15 81811020 81812546 + 0.862226257692557 NA intron (NM_017376, intron 1 of 3) GC_rich|Low_complexity|Low_complexity 369 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak2_168_166_-0.276777946928109_7.24531531901_0.861835798472886 chr18 6490161 6490879 + 0.861835798472886 NA TTS (NR_035446) TTS (NR_035446) 126 NR_035446 100316773 NR_035446 ENSMUSG00000084514 Mir1893 Mirn1893|mmu-mir-1893 microRNA 1893 ncRNA common_peak1_128_83_0.327705730084882_6.5561702878212_0.861351588478261 chr11 23665422 23666903 + 0.861351588478261 NA promoter-TSS (NM_023651) promoter-TSS (NM_023651) 186 NM_028304 74467 Mm.29536 NM_028304 ENSMUSG00000020280 Pus10 2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139 pseudouridylate synthase 10 protein-coding common_peak2_128_83_0.327705730084882_6.5561702878212_0.861351588478261 chr1 155214108 155215041 + 0.861351588478261 NA Intergenic Intergenic 55871 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_127_83_0.316557682719303_6.55059626413841_0.861351588478261 chr11 100618744 100620136 + 0.861351588478261 NA intron (NM_019795, intron 1 of 13) CpG 728 NM_019795 56354 Mm.402409 NM_019795 ENSMUSG00000014195 Dnajc7 2010003F24Rik|2010004G07Rik|CCRP|Ttc2|mDj11|mTpr2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding common_peak1_128_83_0.327705730084882_6.5561702878212_0.861351588478261-2 chr12 108394093 108395947 + 0.861351588478261 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -15613 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_127_83_0.316557682719303_6.55059626413841_0.861351588478261 chr11 83876725 83877847 + 0.861351588478261 NA intron (NM_009330, intron 4 of 8) intron (NM_009330, intron 4 of 8) 24326 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_128_83_0.327705730084882_6.5561702878212_0.861351588478261-3 chr8 122474527 122476046 + 0.861351588478261 NA promoter-TSS (NM_153775) promoter-TSS (NM_153775) 778 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak2_101_105_-0.344308974572537_6.55576596727693_0.861351588478236 chr19 18757612 18759047 + 0.861351588478236 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 8346 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_65_72_-0.429813554055503_5.97491778185227_0.8613235380043-2 chr6 92091657 92092668 + 0.8613235380043 NA promoter-TSS (NM_001347342) promoter-TSS (NM_001347342) -271 NM_001347342 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding common_peak1_87_54_0.390760709499156_5.97674006827424_0.8613235380043 chr3 36474954 36475617 + 0.8613235380043 NA promoter-TSS (NM_028183) promoter-TSS (NM_028183) 239 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak1_65_72_-0.429813554055503_5.97491778185227_0.8613235380043-2 chr17 70755212 70755734 + 0.8613235380043 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 91304 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_65_72_-0.429813554055503_5.97491778185227_0.8613235380043 chr16 55973879 55974543 + 0.8613235380043 NA non-coding (NR_027965, exon 1 of 1) non-coding (NR_027965, exon 1 of 1) 406 NR_027965 66391 Mm.472722 NM_133677 ENSMUSG00000102101 Zbtb11os1 2310061J03Rik zinc finger and BTB domain containing 11, opposite strand 1 ncRNA common_peak2_65_72_-0.429813554055503_5.97491778185227_0.8613235380043 chr11 6200177 6200734 + 0.8613235380043 NA promoter-TSS (NM_173748) promoter-TSS (NM_173748) -4 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding common_peak1_133_134_-0.302317558983687_6.92565681755899_0.860525714033699 chr8 70634270 70634957 + 0.860525714033699 NA Intergenic Intergenic -2157 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_132_134_-0.313048072504798_6.92029156079843_0.860525714033699 chr6 51468894 51469912 + 0.860525714033699 NA intron (NM_016806, intron 1 of 10) CpG 491 NR_104468 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding common_peak1_163_109_0.282544874502534_6.92263215077593_0.860525714033699 chr14 49065584 49067128 + 0.860525714033699 NA promoter-TSS (NM_144535) promoter-TSS (NM_144535) -193 NM_001360070 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding common_peak1_151_100_0.296842012646864_6.80663248907523_0.860481877660472 chr11 101442384 101444036 + 0.860481877660472 NA intron (NM_011289, intron 2 of 4) intron (NM_011289, intron 2 of 4) 965 NM_011289 19942 Mm.340658 NM_011289 ENSMUSG00000063316 Rpl27 - ribosomal protein L27 protein-coding common_peak2_263_183_0.222339089621014_7.63473150086752_0.860323887124498 chr15 85656455 85658864 + 0.860323887124498 NA Intergenic Intergenic -46114 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_218_149_0.249377367724256_7.35350737435801_0.860237862284167 chr15 85672631 85674868 + 0.860237862284167 NA Intergenic Intergenic -30024 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_106_68_0.343641580250989_6.28034524690366_0.859353189187952-2 chr9 118040486 118041350 + 0.859353189187952 NA 5' UTR (NM_001048146, exon 1 of 7) 5' UTR (NM_001048146, exon 1 of 7) 396 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_82_88_-0.387409810075479_6.28202852592866_0.859353189187952 chr7 45813462 45814322 + 0.859353189187952 NA intron (NM_011181, intron 1 of 11) CpG 424 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding common_peak2_82_88_-0.387409810075479_6.28202852592866_0.859353189187952-2 chr8 83566657 83567219 + 0.859353189187952 NA intron (NM_025843, intron 1 of 2) CpG 180 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak1_106_68_0.343641580250989_6.28034524690366_0.859353189187952 chr5 27790654 27791717 + 0.859353189187952 NA intron (NM_018878, intron 1 of 20) CpG 365 NM_018878 55982 Mm.277190 NM_018878 ENSMUSG00000002221 Paxip1 D5Ertd149e|PTIP PAX interacting (with transcription-activation domain) protein 1 protein-coding common_peak2_50_58_-0.491976589797935_5.63665475446287_0.859323385424281 chr1 93671581 93672642 + 0.859323385424281 NA Intergenic Intergenic -13464 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak1_70_42_0.438355987004633_5.64544274820441_0.859323385424281-4 chr8 77549095 77549705 + 0.859323385424281 NA promoter-TSS (NM_001081240) promoter-TSS (NM_001081240) 3 NM_001081240 102182 Mm.197630 NM_178903 ENSMUSG00000037134 Prmt9 AI931714|Prmt10 protein arginine methyltransferase 9 protein-coding common_peak1_70_42_0.438355987004633_5.64544274820441_0.859323385424281 chr11 69324114 69324686 + 0.859323385424281 NA promoter-TSS (NM_172560) promoter-TSS (NM_172560) 414 NM_001024206 245828 Mm.28073 NM_001024206 ENSMUSG00000049299 Trappc1 BET5|D11Ertd172e|MUM2 trafficking protein particle complex 1 protein-coding common_peak2_50_58_-0.491976589797935_5.63665475446287_0.859323385424281-2 chr11 72845862 72846764 + 0.859323385424281 NA intron (NM_001045536, intron 11 of 54) intron (NM_001045536, intron 11 of 54) 50087 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak1_70_42_0.438355987004633_5.64544274820441_0.859323385424281-3 chr2 77279626 77280428 + 0.859323385424281 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 565 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding common_peak2_70_42_0.438355987004633_5.64544274820441_0.859323385424281-3 chr9 108692288 108693048 + 0.859323385424281 NA exon (NM_008924, exon 1 of 11) exon (NM_008924, exon 1 of 11) 525 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding common_peak1_50_58_-0.491976589797935_5.63665475446287_0.859323385424281-2 chr2 151977481 151978100 + 0.859323385424281 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 2429 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak2_70_42_0.438355987004633_5.64544274820441_0.859323385424281-2 chr5 140647997 140648820 + 0.859323385424281 NA intron (NM_001308040, intron 1 of 12) intron (NM_001308040, intron 1 of 12) 623 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding common_peak1_70_42_0.438355987004633_5.64544274820441_0.859323385424281-2 chr12 75827278 75827780 + 0.859323385424281 NA intron (NM_001005510, intron 1 of 115) intron (NM_001005510, intron 1 of 115) 9211 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak2_70_42_0.438355987004633_5.64544274820441_0.859323385424281 chr4 109117095 109118227 + 0.859323385424281 NA intron (NM_001355190, intron 2 of 21) intron (NM_001355190, intron 2 of 21) 375 NM_173350 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak1_50_58_-0.491976589797935_5.63665475446287_0.859323385424281 chr18 31910801 31911260 + 0.859323385424281 NA exon (NM_026006, exon 1 of 1) exon (NM_026006, exon 1 of 1) 873 NM_026006 67158 Mm.31537 NM_026006 ENSMUSG00000044982 Sft2d3 2610206C24Rik|AI847965|AW046173 SFT2 domain containing 3 protein-coding common_peak2_97_61_0.372106853405936_6.14024973708984_0.858683394889021 chr3 53863365 53864072 + 0.858683394889021 NA promoter-TSS (NM_026435) promoter-TSS (NM_026435) 89 NM_026435 67890 Mm.23067 NM_026435 ENSMUSG00000027746 Ufm1 1810045K17Rik|AI132708|AI463323|Gm10726 ubiquitin-fold modifier 1 protein-coding common_peak2_73_80_-0.415944241400426_6.13187788218441_0.858683394889009 chr1 152821218 152822076 + 0.858683394889009 NA exon (NM_010877, exon 5 of 16) exon (NM_010877, exon 5 of 16) 21494 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak2_73_80_-0.415944241400426_6.13187788218441_0.858683394889009-2 chrX 20688006 20689133 + 0.858683394889009 NA 5' UTR (NM_011049, exon 1 of 16) 5' UTR (NM_011049, exon 1 of 16) 143 NM_011049 18555 Mm.102574 NM_011049 ENSMUSG00000031065 Cdk16 Crk5|Pctaire1|Pctk1 cyclin-dependent kinase 16 protein-coding common_peak2_57_65_-0.469481097981187_5.80965357036786_0.858502967881228-3 chr9 122950453 122950977 + 0.858502967881228 NA promoter-TSS (NM_010620) promoter-TSS (NM_010620) 285 NM_025419 66202 Mm.268307 NM_025419 ENSMUSG00000032551 1110059G10Rik - RIKEN cDNA 1110059G10 gene protein-coding common_peak1_58_65_-0.444993034035774_5.82189760234057_0.858502967881228 chr1 64305248 64305630 + 0.858502967881228 NA Intergenic Intergenic -184050 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak2_57_65_-0.469481097981187_5.80965357036786_0.858502967881228-2 chr7 116442704 116443355 + 0.858502967881228 NA intron (NM_011083, intron 1 of 32) intron (NM_011083, intron 1 of 32) 429 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak2_78_48_0.402857822160068_5.81613875519524_0.858502967881228-3 chr19 10113238 10113887 + 0.858502967881228 NA Intergenic LTR88a|LTR|Gypsy? -12059 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_58_65_-0.444993034035774_5.82189760234057_0.858502967881228-2 chr1 64737111 64737629 + 0.858502967881228 NA 5' UTR (NM_022721, exon 1 of 2) 5' UTR (NM_022721, exon 1 of 2) 380 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_78_48_0.402857822160068_5.81613875519524_0.858502967881228 chr18 34372529 34373370 + 0.858502967881228 NA intron (NM_007874, intron 1 of 4) CpG 466 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_78_48_0.402857822160068_5.81613875519524_0.858502967881228 chr5 143234921 143235841 + 0.858502967881228 NA TTS (NR_040700) TTS (NR_040700) 218 NM_177681 231866 Mm.55211 NM_177681 ENSMUSG00000029587 Zfp12 C530015C18|Krox-7|Zfp-12|Znf12 zinc finger protein 12 protein-coding common_peak2_78_48_0.402857822160068_5.81613875519524_0.858502967881228-2 chr18 44661727 44662597 + 0.858502967881228 NA non-coding (NR_026853, exon 1 of 5) non-coding (NR_026853, exon 1 of 5) 104 NM_001085374 328949 Mm.312511 NM_001033406 ENSMUSG00000071856 Mcc D18Ertd451e|E330037C19 mutated in colorectal cancers protein-coding common_peak2_57_65_-0.469481097981187_5.80965357036786_0.858502967881228 chr11 115826720 115827623 + 0.858502967881228 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 3113 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak2_78_48_0.402857822160068_5.81613875519524_0.858502967881228-4 chr3 131110773 131111692 + 0.858502967881228 NA 5' UTR (NM_010703, exon 1 of 12) 5' UTR (NM_010703, exon 1 of 12) 935 NM_001276402 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_78_48_0.402857822160068_5.81613875519524_0.858502967881228-2 chr5 151069809 151070732 + 0.858502967881228 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 117663 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding common_peak2_249_172_0.233217574122974_7.55123701469821_0.85814153624295 chr17 35865989 35868470 + 0.85814153624295 NA 5' UTR (NM_175242, exon 1 of 3) 5' UTR (NM_175242, exon 1 of 3) 614 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak1_333_235_0.200174343091459_7.98273022090757_0.857671741522077 chr2 167689148 167692640 + 0.857671741522077 NA promoter-TSS (NR_015500) promoter-TSS (NR_015500) 135 NR_110334 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_526_474_-0.15565330969336_8.81395704837163_0.857190769129358 chr8 34807344 34810400 + 0.857190769129358 NA intron (NM_176933, intron 1 of 3) CpG-13950 1262 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak1_111_115_-0.340391860482136_6.6877850648865_0.857109344982613 chr17 84183049 84184586 + 0.857109344982613 NA TTS (NM_001001806) TTS (NM_001001806) 4130 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_140_92_0.308283114848234_6.69330036853215_0.857109344982589 chr8 11633704 11634920 + 0.857109344982589 NA intron (NM_001167967, intron 1 of 4) intron (NM_001167967, intron 1 of 4) 724 NR_030781 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak2_197_191_-0.25117087324243_7.45937706409994_0.856910110527074 chr5 24840920 24842643 + 0.856910110527074 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 580 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_234_161_0.23935824002482_7.45952912289703_0.856910110527024 chr16 85172035 85173832 + 0.856910110527024 NA intron (NM_001198825, intron 1 of 15) CpG 774 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_183_179_-0.263109753679909_7.36029821948972_0.856829547325238 chr18 34930763 34931917 + 0.856829547325238 NA intron (NM_144866, intron 2 of 10) intron (NM_144866, intron 2 of 10) 663 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak1_164_110_0.278197057655044_6.93351439517763_0.855942378259451 chr8 70607765 70609313 + 0.855942378259451 NA promoter-TSS (NM_133772) promoter-TSS (NM_133772) -225 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak1_165_110_0.286852774967568_6.93784225383389_0.855942378259451 chr8 126840018 126841927 + 0.855942378259451 NA Intergenic Intergenic -8048 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_165_110_0.286852774967568_6.93784225383389_0.855942378259451 chr3 88501958 88503242 + 0.855942378259451 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 752 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_118_76_0.337648386642437_6.43561073401612_0.855934641417003 chr2 18391886 18392825 + 0.855934641417003 NA exon (NM_007869, exon 1 of 12) exon (NM_007869, exon 1 of 12) 475 NM_001190817 13418 Mm.246674 NM_007869 ENSMUSG00000026740 Dnajc1 4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding common_peak1_211_204_-0.247820003382075_7.55557009781441_0.855179329565825 chr8 80738066 80739465 + 0.855179329565825 NA intron (NM_053124, intron 1 of 23) CpG 694 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak1_146_146_-0.2925335788161_7.05340555542831_0.853759968661919 chr8 128359139 128360441 + 0.853759968661919 NA TTS (NR_035436) TTS (NR_035436) 549 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_184_180_-0.263338206418374_7.36817678387402_0.853462580542602 chr3 37907631 37909079 + 0.853462580542602 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 9542 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_192_130_0.263729368932742_7.16528768600382_0.853415616709195 chr3 121814084 121815783 + 0.853415616709195 NA promoter-TSS (NM_001355756) promoter-TSS (NM_001355756) -24 NM_001355756 19299 Mm.399042 NM_008991 ENSMUSG00000028127 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding common_peak2_62_37_0.445442784803249_5.47064890584521_0.852626677849445-3 chr3 135658035 135658702 + 0.852626677849445 NA intron (NM_008689, intron 5 of 24) intron (NM_008689, intron 5 of 24) 33179 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_62_37_0.445442784803249_5.47064890584521_0.852626677849445-2 chr18 73753950 73754735 + 0.852626677849445 NA intron (NM_053255, intron 1 of 3) CpG 137 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak1_62_37_0.445442784803249_5.47064890584521_0.852626677849445 chr11 86959712 86960484 + 0.852626677849445 NA intron (NM_001005341, intron 2 of 4) PB1D10|SINE|Alu 33664 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_62_37_0.445442784803249_5.47064890584521_0.852626677849445-3 chr4 137448611 137449218 + 0.852626677849445 NA Intergenic Intergenic -4382 NM_027063 69380 Mm.272519 NM_027063 ENSMUSG00000041399 1700013G24Rik AI507018 RIKEN cDNA 1700013G24 gene protein-coding unique_peak1_62_37_0.445442784803249_5.47064890584521_0.852626677849445 chr11 119913636 119914189 + 0.852626677849445 NA exon (NM_001085498, exon 1 of 8) exon (NM_001085498, exon 1 of 8) 102 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding common_peak1_62_37_0.445442784803249_5.47064890584521_0.852626677849445-4 chr8 126685263 126685779 + 0.852626677849445 NA Intergenic Intergenic -92085 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_62_37_0.445442784803249_5.47064890584521_0.852626677849445-2 chr16 29579376 29580224 + 0.852626677849445 NA intron (NM_133752, intron 1 of 28) intron (NM_133752, intron 1 of 28) 466 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak2_62_37_0.445442784803249_5.47064890584521_0.852626677849445 chr16 23449028 23449723 + 0.852626677849445 NA Intergenic Intergenic 20242 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_44_52_-0.516552307136615_5.46964430099489_0.852626677849433-3 chr16 27389085 27389782 + 0.852626677849433 NA intron (NM_001025615, intron 1 of 9) CT-rich|Low_complexity|Low_complexity 477 NM_001289436 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding common_peak2_44_52_-0.516552307136615_5.46964430099489_0.852626677849433 chr1 15805651 15806239 + 0.852626677849433 NA non-coding (NR_152944, exon 1 of 9) non-coding (NR_152944, exon 1 of 9) 299 NM_001286628 21749 Mm.4306 NM_009352 ENSMUSG00000025925 Terf1 Pin2|Trbf1|Trf1 telomeric repeat binding factor 1 protein-coding common_peak2_44_52_-0.516552307136615_5.46964430099489_0.852626677849433-2 chr15 75862172 75862821 + 0.852626677849433 NA intron (NM_026960, intron 1 of 10) intron (NM_026960, intron 1 of 10) 157 NM_026960 69146 Mm.27385 NM_026960 ENSMUSG00000022575 Gsdmd 1810036L03Rik|AW558049|DF5L|Dfna5l|Gsdmdc1|M2-4 gasdermin D protein-coding common_peak1_66_73_-0.427900347988563_5.99550319163467_0.852510036703126 chr11 106487021 106487841 + 0.852510036703126 NA intron (NM_023913, intron 1 of 21) CpG 365 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak1_88_55_0.380952304342324_5.99783107422877_0.852510036703126-2 chr7 13024374 13025444 + 0.852510036703126 NA exon (NM_011588, exon 1 of 17) exon (NM_011588, exon 1 of 17) 757 NM_011588 21849 Mm.15701 NM_011588 ENSMUSG00000005566 Trim28 AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta tripartite motif-containing 28 protein-coding common_peak1_66_73_-0.427900347988563_5.99550319163467_0.852510036703126-2 chr8 84840151 84840667 + 0.852510036703126 NA intron (NM_001297606, intron 1 of 8) CpG 256 NM_001297607 19358 Mm.255539 NM_009010 ENSMUSG00000003813 Rad23a 2310040P19Rik|AL024030|HR23A|mHR23A RAD23 homolog A, nucleotide excision repair protein protein-coding common_peak1_88_55_0.380952304342324_5.99783107422877_0.852510036703126 chr5 34761654 34762436 + 0.852510036703126 NA exon (NM_010414, exon 1 of 67) exon (NM_010414, exon 1 of 67) 305 NM_010414 15194 Mm.209071 NM_010414 ENSMUSG00000029104 Htt AI256365|C430023I11Rik|Hd|Hdh|IT15 huntingtin protein-coding common_peak2_88_55_0.380952304342324_5.99783107422877_0.852510036703126 chr16 32914119 32914953 + 0.852510036703126 NA intron (NM_001081255, intron 1 of 20) CpG 436 NM_001310672 70144 Mm.491178 NM_001081255 ENSMUSG00000022801 Lrch3 2210409B11Rik|AW215594|Gm1742 leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding common_peak2_66_73_-0.427900347988563_5.99550319163467_0.852510036703126 chr8 84840146 84840641 + 0.852510036703126 NA intron (NM_001297606, intron 1 of 8) CpG 272 NM_001297607 19358 Mm.255539 NM_009010 ENSMUSG00000003813 Rad23a 2310040P19Rik|AL024030|HR23A|mHR23A RAD23 homolog A, nucleotide excision repair protein protein-coding common_peak1_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-3 chr9 41478677 41479125 + 0.852249209606516 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 4008 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-11 chr4 155171424 155172165 + 0.852249209606516 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 50741 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-3 chr1 170255269 170255685 + 0.852249209606516 NA non-coding (NR_151590, exon 1 of 1) non-coding (NR_151590, exon 1 of 1) 262 NR_151590 622708 Mm.389210 NR_151590 ENSMUSG00000096964 Gm6345 EG622708 predicted gene 6345 pseudo unique_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516-2 chr19 40402715 40403170 + 0.852249209606516 NA promoter-TSS (NM_001034964) promoter-TSS (NM_001034964) -632 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-2 chr13 74769942 74770580 + 0.852249209606516 NA intron (NM_001301153, intron 3 of 31) intron (NM_001301153, intron 3 of 31) 475 NM_001301156 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-7 chr17 62881676 62882278 + 0.852249209606516 NA promoter-TSS (NM_207654) promoter-TSS (NM_207654) -660 NM_010109 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516 chr11 90637398 90637987 + 0.852249209606516 NA promoter-TSS (NM_199008) promoter-TSS (NM_199008) 416 NM_011505 20913 Mm.207203 NM_011505 ENSMUSG00000020546 Stxbp4 6030470M02Rik|Synip syntaxin binding protein 4 protein-coding unique_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516 chr17 46383745 46384589 + 0.852249209606516 NA exon (NM_207671, exon 1 of 10) exon (NM_207671, exon 1 of 10) 401 NM_021346 57908 Mm.439916 NM_021346 ENSMUSG00000015597 Zfp318 2610034E08Rik|D530032D06Rik|TZF|Znf318 zinc finger protein 318 protein-coding common_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516 chr1 156718471 156718881 + 0.852249209606516 NA intron (NM_145413, intron 1 of 7) CpG 234 NM_145413 215015 Mm.229107 NM_145413 ENSMUSG00000033557 Fam20b C530043G21Rik|mKIAA0475 family with sequence similarity 20, member B protein-coding common_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-5 chr6 121087055 121087431 + 0.852249209606516 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -5616 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-9 chr2 121871930 121872442 + 0.852249209606516 NA intron (NM_001205371, intron 1 of 9) intron (NM_001205371, intron 1 of 9) 4481 NM_001205371 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516-2 chr17 56218686 56219473 + 0.852249209606516 NA promoter-TSS (NM_172624) promoter-TSS (NM_172624) -190 NM_172624 224897 Mm.205535 NM_172624 ENSMUSG00000001229 Dpp9 6430584G11Rik|A330078I11|DPP IX|DPRP2 dipeptidylpeptidase 9 protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-8 chr19 8723646 8724042 + 0.852249209606516 NA promoter-TSS (NM_001161413) promoter-TSS (NM_001161413) 357 NR_002896 83673 Mm.292489 NR_002896 ENSMUSG00000108414 Snhg1 - small nucleolar RNA host gene 1 ncRNA common_peak1_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-2 chr5 135743800 135744172 + 0.852249209606516 NA intron (NM_172541, intron 1 of 11) CpG 186 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding common_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516-5 chr5 139150277 139150796 + 0.852249209606516 NA promoter-TSS (NM_001359098) promoter-TSS (NM_001359098) 167 NM_001359097 19085 Mm.306163 NM_008923 ENSMUSG00000025855 Prkar1b AI385716|RIbeta protein kinase, cAMP dependent regulatory, type I beta protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-5 chr11 115186718 115187258 + 0.852249209606516 NA promoter-TSS (NM_001033393) promoter-TSS (NM_001033393) 328 NM_025400 66176 Mm.86823 NM_025400 ENSMUSG00000015542 Nat9 1110028N05Rik N-acetyltransferase 9 (GCN5-related, putative) protein-coding common_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-2 chr11 76216927 76217501 + 0.852249209606516 NA promoter-TSS (NM_021294) promoter-TSS (NM_021294) 358 NM_177367 276919 Mm.482713 NM_177367 ENSMUSG00000049396 Gemin4 4932415L08Rik|AU015359 gem nuclear organelle associated protein 4 protein-coding common_peak2_47_27_0.496465744814402_5.0555877944648_0.852249209606516 chr6 92380620 92381009 + 0.852249209606516 NA intron (NM_001134461, intron 7 of 7) intron (NM_001134461, intron 7 of 7) 100578 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-6 chr8 126497784 126498117 + 0.852249209606516 NA Intergenic Intergenic -22885 NM_001159907 212728 Mm.482479 NM_001159907 ENSMUSG00000090290 Tarbp1 Gm17296|Gm179 TAR RNA binding protein 1 protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-2 chr1 155092970 155093544 + 0.852249209606516 NA Intergenic Intergenic 6379 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516-3 chr19 7416905 7417374 + 0.852249209606516 NA promoter-TSS (NM_175381) promoter-TSS (NM_175381) -486 NM_175381 108899 Mm.386838 NM_175381 ENSMUSG00000053080 2700081O15Rik AI255177|AI848741|AW742297 RIKEN cDNA 2700081O15 gene protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516 chr1 89265552 89266000 + 0.852249209606516 NA Intergenic Intergenic 140357 NR_040482 77331 Mm.374962 NR_040482 ENSMUSG00000099938 C030007H22Rik - RIKEN cDNA C030007H22 gene ncRNA common_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516-6 chr9 14233119 14233731 + 0.852249209606516 NA Intergenic Intergenic -42876 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-10 chr3 116594262 116594750 + 0.852249209606516 NA promoter-TSS (NM_001289571) promoter-TSS (NM_001289571) 381 NR_152258 229780 Mm.259648 NM_030016 ENSMUSG00000033439 Trmt13 4631408H19Rik|A330067P21|A930028L21Rik|Ccdc76 tRNA methyltransferase 13 protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-12 chr9 34977700 34978217 + 0.852249209606516 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -138770 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516-4 chr4 126429653 126430236 + 0.852249209606516 NA promoter-TSS (NM_153402) promoter-TSS (NM_153402) -402 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding common_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-4 chr17 23563795 23564136 + 0.852249209606516 NA non-coding (NR_126484, exon 2 of 2) non-coding (NR_126484, exon 2 of 2) 261 NM_001033496 449521 Mm.268582 NM_001033496 ENSMUSG00000071256 Zfp213 BC038178|D17Ertd197e zinc finger protein 213 protein-coding unique_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516 chr8 110324318 110324836 + 0.852249209606516 NA intron (NM_172916, intron 6 of 86) intron (NM_172916, intron 6 of 86) 57600 NM_172916 244653 Mm.444803 NM_172916 ENSMUSG00000059854 Hydin 1700034M11Rik|4930545D19Rik|4932703P14|672398|A830061H17|AC069308.21gm4|Gm9558|hy-3|hy3|hyrh HYDIN, axonemal central pair apparatus protein protein-coding common_peak2_32_40_-0.590486020220325_5.06230899450792_0.852249209606516-3 chr16 13667570 13668005 + 0.852249209606516 NA intron (NM_001358453, intron 1 of 22) intron (NM_001358453, intron 1 of 22) 383 NM_001358452 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding common_peak1_48_27_0.526003221308451_5.07035653271183_0.852249209606516 chr13 46929018 46929628 + 0.852249209606516 NA intron (NM_010617, intron 1 of 37) intron (NM_010617, intron 1 of 37) 395 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding common_peak2_47_27_0.496465744814402_5.0555877944648_0.852249209606516-2 chr7 25832193 25832601 + 0.852249209606516 NA Intergenic Intergenic -15867 NM_028775 74134 Mm.275188 NM_028775 ENSMUSG00000040703 Cyp2s1 1200011C15Rik|AU041727|C79779 cytochrome P450, family 2, subfamily s, polypeptide 1 protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-6 chr15 81913367 81913969 + 0.852249209606516 NA intron (NM_080633, intron 15 of 17) intron (NM_080633, intron 15 of 17) 12545 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_47_27_0.496465744814402_5.0555877944648_0.852249209606516-4 chr11 61956847 61957355 + 0.852249209606516 NA intron (NM_001310526, intron 1 of 7) CpG 338 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_32_40_-0.590486020220325_5.06230899450792_0.852249209606516 chr1 64933340 64933670 + 0.852249209606516 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 23319 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_48_27_0.526003221308451_5.07035653271183_0.852249209606516 chr6 117907942 117908301 + 0.852249209606516 NA intron (NM_001166428, intron 1 of 3) CpG 317 NM_001166429 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_83_89_-0.386373379883539_6.29866640638791_0.852247424042116 chr11 29172967 29173497 + 0.852247424042116 NA 5' UTR (NM_134034, exon 1 of 16) 5' UTR (NM_134034, exon 1 of 16) 325 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding common_peak2_83_89_-0.386373379883539_6.29866640638791_0.852247424042116 chr2 158138682 158139607 + 0.852247424042116 NA intron (NM_009373, intron 2 of 12) intron (NM_009373, intron 2 of 12) 7248 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_108_69_0.34941186818348_6.30398895103671_0.852247424042116 chr15 59597704 59598856 + 0.852247424042116 NA intron (NM_026746, intron 6 of 6) intron (NM_026746, intron 6 of 6) -50374 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_83_89_-0.386373379883539_6.29866640638791_0.852247424042116-2 chr7 79147944 79149003 + 0.852247424042116 NA intron (NM_001045489, intron 1 of 8) intron (NM_001045489, intron 1 of 8) 587 NM_001045489 17304 Mm.1451 NM_008594 ENSMUSG00000030605 Mfge8 AA408458|AI325141|MFG-E8|MP47|Mfgm|P47|SED1|lactadherin milk fat globule-EGF factor 8 protein protein-coding common_peak1_227_218_-0.23889796197506_7.65533807861364_0.851999969564091 chr8 64690949 64693181 + 0.851999969564091 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 1044 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_141_93_0.30297691045585_6.70607730690556_0.85176625806429 chr2 117541852 117543563 + 0.85176625806429 NA Intergenic Intergenic -199830 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_166_111_0.282517449968941_6.94861364704207_0.85143365319847 chr10 59947615 59949744 + 0.85143365319847 NA TTS (NM_029083) TTS (NM_029083) 3091 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_336_238_0.194760060496042_7.99824683822877_0.851137748233213 chr7 98358989 98361218 + 0.851137748233213 NA intron (NM_001168540, intron 1 of 2) intron (NM_001168540, intron 1 of 2) 1185 NM_001168540 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding common_peak2_74_81_-0.414417540238321_6.15034323449892_0.850837296171875-2 chr2 69861666 69862548 + 0.850837296171875 NA intron (NM_009278, intron 1 of 11) CpG 545 NM_009278 20823 Mm.10508 NM_009278 ENSMUSG00000068882 Ssb SS-B Sjogren syndrome antigen B protein-coding common_peak2_74_81_-0.414417540238321_6.15034323449892_0.850837296171875 chr18 38600371 38601275 + 0.850837296171875 NA intron (NM_011898, intron 1 of 1) CpG 445 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak1_75_81_-0.395443529646181_6.15983023979499_0.850837296171875 chr16 94370356 94371393 + 0.850837296171875 NA promoter-TSS (NM_001159620) promoter-TSS (NM_001159620) 135 NM_009441 22129 Mm.213408 NM_009441 ENSMUSG00000040785 Ttc3 2610202A04Rik|AA409221|D16Ium21|D16Ium21e|TPRD|mKIAA4119 tetratricopeptide repeat domain 3 protein-coding common_peak2_74_81_-0.414417540238321_6.15034323449892_0.850837296171875-3 chr6 146724472 146725652 + 0.850837296171875 NA intron (NM_001346666, intron 1 of 11) CpG 132 NM_172734 232533 Mm.322121 NM_172734 ENSMUSG00000001630 Stk38l 4930473A22Rik|Ndr2|Ndr54 serine/threonine kinase 38 like protein-coding common_peak1_74_81_-0.414417540238321_6.15034323449892_0.850837296171875 chr3 109123170 109123779 + 0.850837296171875 NA intron (NM_172685, intron 1 of 9) intron (NM_172685, intron 1 of 9) 325 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_98_62_0.363566683552052_6.15906326527594_0.850837296171863 chr11 103051757 103052490 + 0.850837296171863 NA intron (NM_008707, intron 3 of 11) B4|SINE|B4 23580 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak1_153_102_0.287278945414727_6.83013999989058_0.850630095476683 chr13 52979277 52981034 + 0.850630095476683 NA intron (NM_017373, intron 1 of 1) intron (NM_017373, intron 1 of 1) 884 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_243_232_-0.231140034497892_7.74861612740533_0.850229387784994 chr11 4298649 4301325 + 0.850229387784994 NA Intergenic Intergenic 33191 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_456_328_0.170028389070509_8.4469579682705_0.850140620375204 chr3 88493210 88497024 + 0.850140620375204 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) -1805 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_221_152_0.240298541445756_7.37753711341553_0.85013621309306 chr10 7680361 7682007 + 0.85013621309306 NA promoter-TSS (NR_033219) promoter-TSS (NR_033219) -25 NM_010690 16798 Mm.34083 NM_010690 ENSMUSG00000040021 Lats1 AW208599 large tumor suppressor protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-7 chr4 141663592 141663796 + 0.849699271740893 NA intron (NM_001347237, intron 1 of 18) CpG 421 NM_001347237 69582 Mm.33220 NM_001033150 ENSMUSG00000028917 Plekhm2 2310034J19Rik|AI854247|mKIAA0842 pleckstrin homology domain containing, family M (with RUN domain) member 2 protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893 chr13 50977243 50977663 + 0.849699271740893 NA Intergenic Intergenic 123274 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-6 chr2 16490548 16491126 + 0.849699271740893 NA intron (NM_026162, intron 1 of 13) intron (NM_026162, intron 1 of 13) 134533 NM_026162 67448 Mm.313938 NM_026162 ENSMUSG00000026748 Plxdc2 1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r plexin domain containing 2 protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-3 chr15 73185150 73185393 + 0.849699271740893 NA promoter-TSS (NM_153178) promoter-TSS (NM_153178) -324 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-9 chr2 51289047 51289481 + 0.849699271740893 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 47433 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-9 chr8 122476321 122476538 + 0.849699271740893 NA promoter-TSS (NM_001033142) promoter-TSS (NM_001033142) 286 NR_152823 66965 Mm.482288 NM_153775 ENSMUSG00000049482 Ctu2 2310061F22Rik|C16orf84|Ncs2 cytosolic thiouridylase subunit 2 protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-8 chr6 86733518 86733774 + 0.849699271740893 NA promoter-TSS (NM_011818) promoter-TSS (NM_011818) -268 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-7 chr2 18056022 18056572 + 0.849699271740893 NA intron (NR_149308, intron 1 of 9) intron (NR_149308, intron 1 of 9) 569 NR_149308 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-11 chr4 155221890 155222354 + 0.849699271740893 NA exon (NM_011385, exon 1 of 7) exon (NM_011385, exon 1 of 7) 413 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-3 chr14 65967375 65968118 + 0.849699271740893 NA promoter-TSS (NM_013492) promoter-TSS (NM_013492) -737 NM_013492 12759 Mm.200608 NM_013492 ENSMUSG00000022037 Clu AI893575|ApoJ|Cli|D14Ucla3|SP-40|Sgp-2|Sgp2|Sugp-2 clusterin protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-2 chr14 76152286 76152536 + 0.849699271740893 NA Intergenic Intergenic 41520 NM_013745 27275 Mm.21138 NM_013745 ENSMUSG00000022009 Nufip1 Nufip nuclear fragile X mental retardation protein interacting protein 1 protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-4 chr17 45691917 45692233 + 0.849699271740893 NA intron (NM_026732, intron 1 of 2) intron (NM_026732, intron 1 of 2) 5726 NM_026732 68463 Mm.379158 NM_026732 ENSMUSG00000023939 Mrpl14 1110006I11Rik|AI846816|MRP-L32|Rpml32 mitochondrial ribosomal protein L14 protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-8 chr8 60859893 60860112 + 0.849699271740893 NA Intergenic Intergenic -30391 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-5 chr17 56026892 56027117 + 0.849699271740893 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 9633 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-4 chr16 94452560 94452880 + 0.849699271740893 NA intron (NM_009441, intron 36 of 45) intron (NM_009441, intron 36 of 45) 73909 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-4 chr15 77732775 77733137 + 0.849699271740893 NA intron (NM_001168660, intron 1 of 2) intron (NM_001168660, intron 1 of 2) 3835 NM_001168660 71898 Mm.422856 NM_173743 ENSMUSG00000068246 Apol9b 2310016F22Rik apolipoprotein L 9b protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-3 chr11 68467993 68468301 + 0.849699271740893 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) -34872 NM_001004435 104709 Mm.234573 NM_001004435 ENSMUSG00000046207 Pik3r6 BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 5 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-5 chr19 7054135 7054710 + 0.849699271740893 NA Intergenic B1_Mur3|SINE|Alu -2346 NM_134147 107227 Mm.439977 NM_134147 ENSMUSG00000036278 Macrod1 AI604841|AW743046|D930010J01Rik|Lrp16 MACRO domain containing 1 protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-7 chr5 98944244 98944606 + 0.849699271740893 NA intron (NM_008926, intron 15 of 18) MLT1A|LTR|ERVL-MaLR 90010 NM_001310677 110075 Mm.136461 NM_173404 ENSMUSG00000029335 Bmp3 9530029I04Rik bone morphogenetic protein 3 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893 chr10 94462995 94463443 + 0.849699271740893 NA intron (NM_001359762, intron 2 of 4) intron (NM_001359762, intron 2 of 4) -51638 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-10 chr4 148150514 148150835 + 0.849699271740893 NA intron (NM_001163707, intron 1 of 5) intron (NM_001163707, intron 1 of 5) 1251 NM_001163705 50762 Mm.27445 NM_015797 ENSMUSG00000055401 Fbxo6 AA408845|FBG2|Fbs2|Fbx6b|Fbxo6b F-box protein 6 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-2 chr11 82889803 82890365 + 0.849699271740893 NA intron (NM_001277941, intron 1 of 8) intron (NM_001277941, intron 1 of 8) 540 NR_102719 19364 Mm.9286 NM_011235 ENSMUSG00000018841 Rad51d R51H3|Rad51l3|TRAD|Trad-d5 RAD51 paralog D protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-6 chr2 115780971 115781270 + 0.849699271740893 NA Intergenic Intergenic 142395 NR_035476 100316703 NR_035476 ENSMUSG00000088606 Mir1951 mir-1951|mmu-mir-1951 microRNA 1951 ncRNA common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893 chr1 9798239 9798550 + 0.849699271740893 NA intron (NM_177547, intron 1 of 16) CpG 264 NM_177547 170755 Mm.336410 NM_133220 ENSMUSG00000025915 Sgk3 2510015P22Rik|A330005P07Rik|Cisk|fy|fz serum/glucocorticoid regulated kinase 3 protein-coding unique_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-8 chr2 28513046 28513632 + 0.849699271740893 NA 5' UTR (NM_001145834, exon 1 of 18) 5' UTR (NM_001145834, exon 1 of 18) 172 NM_001145834 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak1_29_15_0.630532545199129_4.31526627259956_0.849699271740893-5 chr19 5870446 5870965 + 0.849699271740893 NA intron (NM_026169, intron 3 of 10) intron (NM_026169, intron 3 of 10) 4503 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-2 chr1 181756410 181756704 + 0.849699271740893 NA Intergenic Intergenic 85844 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893-6 chr17 78200315 78200653 + 0.849699271740893 NA 5' UTR (NM_015800, exon 1 of 17) 5' UTR (NM_015800, exon 1 of 17) 236 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak2_29_15_0.630532545199129_4.31526627259956_0.849699271740893 chr7 144581692 144582136 + 0.849699271740893 NA intron (NM_010175, intron 1 of 1) intron (NM_010175, intron 1 of 1) 522 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-4 chr4 135309810 135310130 + 0.84969927174089 NA Intergenic Intergenic -37210 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-3 chr3 119745373 119745627 + 0.84969927174089 NA intron (NM_001310711, intron 7 of 13) intron (NM_001310711, intron 7 of 13) 37888 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-2 chr14 7843545 7844037 + 0.84969927174089 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 25834 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-2 chr2 117474137 117474350 + 0.84969927174089 NA Intergenic Intergenic -131366 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_17_25_-0.801673489895143_4.29960297319352_0.84969927174089 chr1 97769637 97769911 + 0.84969927174089 NA promoter-TSS (NM_026250) promoter-TSS (NM_026250) 318 NM_173760 227399 Mm.220817 NM_173760 ENSMUSG00000040648 Ppip5k2 AW555814|Cfap160|D330021B20|Hisppd1|Vip2|mKIAA0433 diphosphoinositol pentakisphosphate kinase 2 protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-6 chr5 103757043 103757674 + 0.84969927174089 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 2785 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089 chr1 192780006 192780371 + 0.84969927174089 NA Intergenic Intergenic -8969 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-5 chr4 141426550 141426876 + 0.84969927174089 NA Intergenic Intergenic 5934 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089 chr11 87578392 87578889 + 0.84969927174089 NA intron (NM_001284398, intron 1 of 10) CpG 251 NM_001284398 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|Pnutl2 septin 4 protein-coding unique_peak1_17_25_-0.801673489895143_4.29960297319352_0.84969927174089 chr15 55049195 55049566 + 0.84969927174089 NA intron (NM_001081288, intron 12 of 25) intron (NM_001081288, intron 12 of 25) 22772 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-2 chr2 165867808 165868158 + 0.84969927174089 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) -9810 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-7 chr6 85451580 85451910 + 0.84969927174089 NA promoter-TSS (NM_001163427) promoter-TSS (NM_001163427) 225 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-3 chr15 59315275 59315534 + 0.84969927174089 NA 5' UTR (NM_009270, exon 1 of 11) 5' UTR (NM_009270, exon 1 of 11) 312 NM_009270 20775 Mm.296169 NM_009270 ENSMUSG00000022351 Sqle AI323792 squalene epoxidase protein-coding common_peak1_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-3 chr6 112949028 112949460 + 0.84969927174089 NA Intergenic Intergenic -1978 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-8 chr7 6172852 6173265 + 0.84969927174089 NA intron (NM_028316, intron 1 of 3) CpG 545 NM_001146024 72667 Mm.274089 NM_028316 ENSMUSG00000044876 Zfp444 2810031J10Rik|6230401O10Rik|mFLJ00134 zinc finger protein 444 protein-coding common_peak2_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-4 chr2 119972489 119972887 + 0.84969927174089 NA promoter-TSS (NM_011941) promoter-TSS (NM_011941) -11 NM_001355293 26390 Mm.330501 NM_011941 ENSMUSG00000033902 Mapkbp1 2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596 mitogen-activated protein kinase binding protein 1 protein-coding common_peak1_17_25_-0.801673489895143_4.29960297319352_0.84969927174089-4 chr8 110827809 110828112 + 0.84969927174089 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 10638 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_38_46_-0.548215074995069_5.2804813141801_0.849650211186454-3 chr18 36399084 36399780 + 0.849650211186454 NA Intergenic Intergenic 50808 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding common_peak2_38_46_-0.548215074995069_5.2804813141801_0.849650211186454-2 chr17 70992533 70993415 + 0.849650211186454 NA TTS (NM_001357820) TTS (NM_001357820) -2458 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_38_46_-0.548215074995069_5.2804813141801_0.849650211186454 chr16 24435416 24436161 + 0.849650211186454 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -12303 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_38_46_-0.548215074995069_5.2804813141801_0.849650211186454 chr5 105519463 105519836 + 0.849650211186454 NA intron (NM_133897, intron 1 of 3) CpG 178 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_38_46_-0.548215074995069_5.2804813141801_0.849650211186454-2 chr6 127330533 127331033 + 0.849650211186454 NA Intergenic Intergenic -22816 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_55_32_0.480249994860227_5.28451911678857_0.849650211186447-4 chr3 144201075 144201822 + 0.849650211186447 NA intron (NM_001161769, intron 2 of 4) intron (NM_001161769, intron 2 of 4) 884 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_55_32_0.480249994860227_5.28451911678857_0.849650211186447-5 chr4 88799685 88800073 + 0.849650211186447 NA promoter-TSS (NM_001161609).8 promoter-TSS (NM_001161609).8 304 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 - predicted gene 13275 protein-coding common_peak2_55_32_0.480249994860227_5.28451911678857_0.849650211186447 chr9 106369026 106369694 + 0.849650211186447 NA intron (NM_153459, intron 1 of 2) CpG 728 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_55_32_0.480249994860227_5.28451911678857_0.849650211186447-3 chr19 41455716 41456190 + 0.849650211186447 NA Intergenic Intergenic -69299 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding unique_peak1_55_32_0.480249994860227_5.28451911678857_0.849650211186447 chr5 91110626 91111453 + 0.849650211186447 NA Intergenic Intergenic -28560 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding common_peak1_55_32_0.480249994860227_5.28451911678857_0.849650211186447 chr11 70844799 70845523 + 0.849650211186447 NA intron (NM_001291141, intron 1 of 16) G-rich|Low_complexity|Low_complexity 400 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding common_peak1_55_32_0.480249994860227_5.28451911678857_0.849650211186447-2 chr15 64557602 64558110 + 0.849650211186447 NA Intergenic L2a|LINE|L2 -174937 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_103_107_-0.343459286854844_6.58315785873605_0.849626150099163 chr5 31575553 31576539 + 0.849626150099163 NA Intergenic Intergenic -4649 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_130_85_0.315797553740293_6.58416353157224_0.849626150099139 chr17 28339761 28341189 + 0.849626150099139 NA intron (NM_001098226, intron 2 of 12) intron (NM_001098226, intron 2 of 12) 9871 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak2_130_85_0.315797553740293_6.58416353157224_0.849626150099139 chr16 92610368 92611266 + 0.849626150099139 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 86512 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_130_85_0.315797553740293_6.58416353157224_0.849626150099139-2 chr4 108779778 108781027 + 0.849626150099139 NA intron (NM_001347163, intron 1 of 18) CpG 686 NM_001347163 230597 Mm.196776 NM_183300 ENSMUSG00000034557 Zfyve9 Madhip|NSP|SARA|SMADIP zinc finger, FYVE domain containing 9 protein-coding common_peak1_119_77_0.331020367190392_6.45091240245744_0.849561972904728 chr13 49188151 49189182 + 0.849561972904728 NA intron (NM_013610, intron 1 of 3) intron (NM_013610, intron 1 of 3) 1119 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak2_93_98_-0.362750296350799_6.44798147190421_0.849561972904728 chr9 20887721 20888961 + 0.849561972904728 NA intron (NM_145610, intron 1 of 10) CpG 166 NM_145610 235036 Mm.2930 NM_145610 ENSMUSG00000004100 Ppan A230087P06Rik|SSF1 peter pan homolog protein-coding common_peak1_119_77_0.331020367190392_6.45091240245744_0.849561972904728-2 chr13 102899631 102900784 + 0.849561972904728 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 139952 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak1_119_77_0.331020367190392_6.45091240245744_0.849561972904728-3 chr8 70128919 70130230 + 0.849561972904728 NA Intergenic Intergenic -1753 NR_104434 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding common_peak1_59_66_-0.442611624831887_5.84478337804183_0.848735523516971-2 chr7 28377742 28378702 + 0.848735523516971 NA exon (NM_011756, exon 2 of 2) exon (NM_011756, exon 2 of 2) 1006 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_59_66_-0.442611624831887_5.84478337804183_0.848735523516971 chr15 66845203 66846083 + 0.848735523516971 NA intron (NM_009375, intron 45 of 47) intron (NM_009375, intron 45 of 47) -13814 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_59_66_-0.442611624831887_5.84478337804183_0.848735523516971-3 chr4 101264364 101265306 + 0.848735523516971 NA intron (NM_146145, intron 1 of 24) CpG 447 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_59_66_-0.442611624831887_5.84478337804183_0.848735523516971-2 chr3 144198221 144199050 + 0.848735523516971 NA intron (NM_001161769, intron 2 of 4) CpG 3697 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_59_66_-0.442611624831887_5.84478337804183_0.848735523516971 chr3 37874714 37875174 + 0.848735523516971 NA Intergenic Intergenic -23869 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_79_49_0.391730794050462_5.83972158679996_0.848735523516959-2 chr5 96160768 96161761 + 0.848735523516959 NA intron (NM_144910, intron 1 of 11) CpG 283 NM_001285511 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak1_80_49_0.409526263352889_5.84861932145117_0.848735523516959 chr11 121647846 121648440 + 0.848735523516959 NA intron (NM_178664, intron 4 of 12) intron (NM_178664, intron 4 of 12) 25008 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_80_49_0.409526263352889_5.84861932145117_0.848735523516959-2 chr3 97901356 97901764 + 0.848735523516959 NA intron (NM_011342, intron 1 of 4) intron (NM_011342, intron 1 of 4) 333 NM_011342 20333 Mm.2551 NM_011342 ENSMUSG00000027879 Sec22b 4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1 SEC22 homolog B, vesicle trafficking protein protein-coding common_peak1_80_49_0.409526263352889_5.84861932145117_0.848735523516959-3 chr5 36465167 36465916 + 0.848735523516959 NA promoter-TSS (NR_126488) promoter-TSS (NR_126488) 356 NM_024478 17713 Mm.21535 NM_024478 ENSMUSG00000029198 Grpel1 AA408748|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial protein-coding common_peak2_80_49_0.409526263352889_5.84861932145117_0.848735523516959 chr11 59847871 59848569 + 0.848735523516959 NA exon (NM_134029, exon 1 of 5) exon (NM_134029, exon 1 of 5) 147 NM_134029 103850 Mm.41761 NM_134029 ENSMUSG00000032615 Nt5m 2010013E09Rik|AI846937|dNT-2 5',3'-nucleotidase, mitochondrial protein-coding common_peak1_79_49_0.391730794050462_5.83972158679996_0.848735523516959 chr15 73149157 73149863 + 0.848735523516959 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 35437 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_80_49_0.409526263352889_5.84861932145117_0.848735523516959-2 chr18 90510256 90511069 + 0.848735523516959 NA intron (NM_198295, intron 1 of 15) intron (NM_198295, intron 1 of 15) 508 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak2_71_43_0.425224650462163_5.67204394386838_0.848284310483219-2 chr15 53686766 53687193 + 0.848284310483219 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -72700 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_71_43_0.425224650462163_5.67204394386838_0.848284310483219-4 chr2 167232389 167233082 + 0.848284310483219 NA intron (NM_008968, intron 1 of 9) intron (NM_008968, intron 1 of 9) 7802 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak2_71_43_0.425224650462163_5.67204394386838_0.848284310483219 chr14 31829829 31830565 + 0.848284310483219 NA intron (NM_001024604, intron 1 of 27) CpG 218 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak2_71_43_0.425224650462163_5.67204394386838_0.848284310483219-3 chr2 69789719 69790253 + 0.848284310483219 NA promoter-TSS (NM_001077684) promoter-TSS (NM_001077684) 249 NM_028521 73373 Mm.9621 NM_028521 ENSMUSG00000027088 Phospho2 1700048E23Rik|AI661517|AU021728|AV006103|Phos2 phosphatase, orphan 2 protein-coding common_peak1_71_43_0.425224650462163_5.67204394386838_0.848284310483219-3 chr2 166793258 166794294 + 0.848284310483219 NA promoter-TSS (NM_023815) promoter-TSS (NM_023815) 9 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak2_71_43_0.425224650462163_5.67204394386838_0.848284310483219-4 chr5 143403866 143404423 + 0.848284310483219 NA intron (NM_025841, intron 1 of 4) CpG 324 NM_025841 66913 Mm.181880 NM_025841 ENSMUSG00000079111 Kdelr2 1110007A14Rik KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein-coding common_peak1_71_43_0.425224650462163_5.67204394386838_0.848284310483219-2 chr2 21237282 21238067 + 0.848284310483219 NA Intergenic Intergenic 31950 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak1_71_43_0.425224650462163_5.67204394386838_0.848284310483219 chr19 5924982 5925753 + 0.848284310483219 NA promoter-TSS (NM_026772) promoter-TSS (NM_026772) -551 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_51_59_-0.48840740072665_5.66268689524519_0.848284310483207 chr13 31476767 31478005 + 0.848284310483207 NA Intergenic Intergenic -80784 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding common_peak2_51_59_-0.48840740072665_5.66268689524519_0.848284310483207-2 chr6 128300646 128301193 + 0.848284310483207 NA promoter-TSS (NM_011567) promoter-TSS (NM_011567) -106 NM_011567 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding common_peak1_51_59_-0.48840740072665_5.66268689524519_0.848284310483207 chr5 115069981 115070810 + 0.848284310483207 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 37567 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding common_peak2_173_170_-0.269158870854421_7.28327307945869_0.847416845772596 chr10 93640889 93642643 + 0.847416845772596 NA intron (NM_021320, intron 1 of 9) intron (NM_021320, intron 1 of 9) 717 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding common_peak2_167_112_0.278245774457704_6.95930184964404_0.84699772864502 chr15 75923888 75925317 + 0.84699772864502 NA TTS (NM_031201) TTS (NM_031201) -3042 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak2_294_276_-0.208794141119119_8.00934509548963_0.846866379422623 chr4 63068480 63071578 + 0.846866379422623 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 84143 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding common_peak1_295_276_-0.203946363711481_8.01176898419345_0.846866379422623 chr5 143526154 143527986 + 0.846866379422623 NA intron (NM_001347530, intron 1 of 6) intron (NM_001347530, intron 1 of 6) 923 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding common_peak2_295_276_-0.203946363711481_8.01176898419345_0.846866379422623 chr5 143526144 143527995 + 0.846866379422623 NA intron (NM_001347530, intron 1 of 6) intron (NM_001347530, intron 1 of 6) 924 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e Rac family small GTPase 1 protein-coding common_peak1_125_127_-0.313684681326409_6.8431576593368_0.845833420372485 chr1 167307902 167309432 + 0.845833420372485 NA promoter-TSS (NM_001039483) promoter-TSS (NM_001039483) -3 NM_001039483 68944 Mm.330045 NM_026881 ENSMUSG00000052428 Tmco1 1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39 transmembrane and coiled-coil domains 1 protein-coding common_peak2_84_90_-0.38536186368161_6.31511370835789_0.845320727490267-2 chr7 142471056 142472549 + 0.845320727490267 NA promoter-TSS (NM_019391) promoter-TSS (NM_019391) -41 NM_001271508 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_84_90_-0.38536186368161_6.31511370835789_0.845320727490267 chr16 16215344 16216917 + 0.845320727490267 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 2785 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak2_109_70_0.342030202273012_6.32076222064119_0.845320727490267 chr7 79465093 79466136 + 0.845320727490267 NA intron (NM_001360095, intron 1 of 22) CpG 659 NM_001360095 18975 Mm.3616 NM_017462 ENSMUSG00000039176 Polg AA409516|PolgA polymerase (DNA directed), gamma protein-coding common_peak2_340_241_0.193666681084208_8.0156965778167_0.844755492971179 chr4 116075205 116077495 + 0.844755492971179 NA intron (NM_153521, intron 1 of 9) CpG 1081 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-6 chr10 27655024 27655317 + 0.844317084070804 NA Intergenic Intergenic -38228 NM_008481 16773 Mm.256087 NM_008481 ENSMUSG00000019899 Lama2 5830440B04|dy|mKIAA4087|mer|merosin laminin, alpha 2 protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804 chr10 4335678 4335890 + 0.844317084070804 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 51691 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-30 chr3 137156573 137156809 + 0.844317084070804 NA Intergenic Intergenic -184387 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-13 chr16 85800888 85801152 + 0.844317084070804 NA intron (NM_009621, intron 1 of 8) intron (NM_009621, intron 1 of 8) 2093 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-27 chr18 62163224 62163826 + 0.844317084070804 NA Intergenic Intergenic 16456 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-16 chr15 85875174 85875525 + 0.844317084070804 NA intron (NM_013882, intron 9 of 10) intron (NM_013882, intron 9 of 10) -3978 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-25 chr17 45751973 45752316 + 0.844317084070804 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 17638 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-41 chr8 119712574 119712836 + 0.844317084070804 NA intron (NM_026922, intron 1 of 26) intron (NM_026922, intron 1 of 26) 12696 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-2 chr12 27304682 27305023 + 0.844317084070804 NA Intergenic Intergenic 37866 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-36 chr4 137527803 137528192 + 0.844317084070804 NA intron (NM_008305, intron 33 of 96) intron (NM_008305, intron 33 of 96) -10289 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-6 chr5 92763071 92763269 + 0.844317084070804 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 25392 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak2_19_9_0.727768848084312_3.68581251892952_0.844317084070804 chr14 121244038 121244259 + 0.844317084070804 NA intron (NM_134082, intron 13 of 26) intron (NM_134082, intron 13 of 26) -4558 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-7 chr14 7953684 7953974 + 0.844317084070804 NA Intergenic B4|SINE|B4 40353 NM_007870 13421 Mm.272258 NM_007870 ENSMUSG00000025279 Dnase1l3 DNasegamma|Dhp2|Lsd deoxyribonuclease 1-like 3 protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-7 chr4 141060014 141060365 + 0.844317084070804 NA intron (NM_001145958, intron 1 of 35) CpG 356 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-40 chr6 146978134 146978516 + 0.844317084070804 NA intron (NM_001355729, intron 5 of 27) intron (NM_001355729, intron 5 of 27) -23904 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-3 chr2 148877052 148877287 + 0.844317084070804 NA Intergenic Intergenic -1657 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804 chr10 87773480 87773788 + 0.844317084070804 NA Intergenic Intergenic -84631 NM_001314010 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-35 chr4 136575129 136575343 + 0.844317084070804 NA intron (NM_001356567, intron 3 of 19) intron (NM_001356567, intron 3 of 19) 27487 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-38 chr7 136893973 136894348 + 0.844317084070804 NA promoter-TSS (NM_008598) promoter-TSS (NM_008598) -451 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-35 chr6 86900355 86900641 + 0.844317084070804 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 50981 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-20 chr5 5708476 5708735 + 0.844317084070804 NA Intergenic Intergenic -14037 NM_028734 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-23 chr17 84156129 84156539 + 0.844317084070804 NA Intergenic Intergenic 31613 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_19_9_0.727768848084312_3.68581251892952_0.844317084070804 chr13 34499373 34499599 + 0.844317084070804 NA Intergenic Intergenic 153195 NM_025831 66895 Mm.28943 NM_025831 ENSMUSG00000021411 Pxdc1 1300014I06Rik PX domain containing 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-19 chr14 75786744 75786979 + 0.844317084070804 NA intron (NM_026232, intron 1 of 9) CpG 176 NM_026232 67554 Mm.46067 NM_026232 ENSMUSG00000022003 Slc25a30 4933433D23Rik|AV025504|AV221431|AW319655|KMCP1 solute carrier family 25, member 30 protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-4 chr16 97075158 97075469 + 0.844317084070804 NA intron (NM_031174, intron 1 of 32) intron (NM_031174, intron 1 of 32) 95422 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-6 chr11 118365084 118365286 + 0.844317084070804 NA Intergenic Intergenic -9774 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-25 chrX 96086787 96087190 + 0.844317084070804 NA Intergenic B1F|SINE|Alu -9057 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-39 chr6 90370960 90371262 + 0.844317084070804 NA intron (NM_173002, intron 1 of 9) intron (NM_173002, intron 1 of 9) 1617 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-4 chr1 171469168 171469473 + 0.844317084070804 NA Intergenic Intergenic 31759 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-14 chr16 92444577 92444953 + 0.844317084070804 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) 21404 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-14 chr12 51887255 51887501 + 0.844317084070804 NA intron (NM_177171, intron 32 of 35) intron (NM_177171, intron 32 of 35) -57842 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-20 chr14 122912481 122912707 + 0.844317084070804 NA promoter-TSS (NR_155287) promoter-TSS (NR_155287) -436 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-9 chr7 47072948 47073309 + 0.844317084070804 NA Intergenic Intergenic 10096 NR_106023 102465639 NR_106023 ENSMUSG00000098960 Mir7056 Gm27696|mmu-mir-7056 microRNA 7056 ncRNA unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-11 chr16 38432627 38432865 + 0.844317084070804 NA intron (NM_134102, intron 1 of 10) intron (NM_134102, intron 1 of 10) 399 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-9 chr8 60952575 60952923 + 0.844317084070804 NA intron (NM_007711, intron 1 of 11) intron (NM_007711, intron 1 of 11) 2050 NM_173876 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-22 chr15 76871035 76871254 + 0.844317084070804 NA 5' UTR (NM_001007568, exon 1 of 4) 5' UTR (NM_001007568, exon 1 of 4) 291 NM_001007568 71591 Mm.38195 NM_001007568 ENSMUSG00000022526 Zfp251 9130001M19Rik|AV339307 zinc finger protein 251 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-8 chr11 3910290 3910658 + 0.844317084070804 NA intron (NM_153142, intron 1 of 1) intron (NM_153142, intron 1 of 1) 4190 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-5 chr11 103386995 103387250 + 0.844317084070804 NA exon (NM_183034, exon 5 of 12) exon (NM_183034, exon 5 of 12) -23430 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-46 chr9 110477027 110477342 + 0.844317084070804 NA promoter-TSS (NM_177771) promoter-TSS (NM_177771) 190 NM_001163569 16578 Mm.42170 NM_010628 ENSMUSG00000032489 Kif9 - kinesin family member 9 protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-2 chr14 20164972 20165176 + 0.844317084070804 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 16708 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804 chr1 74302822 74303181 + 0.844317084070804 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 1335 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-21 chr17 26972726 26972920 + 0.844317084070804 NA promoter-TSS (NM_001005916) promoter-TSS (NM_001005916) -356 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-29 chr2 151923172 151923541 + 0.844317084070804 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 12149 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-3 chr15 78925612 78925895 + 0.844317084070804 NA promoter-TSS (NM_008495) promoter-TSS (NM_008495) -972 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-10 chr8 78717023 78717291 + 0.844317084070804 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 103995 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-45 chr9 44728608 44728808 + 0.844317084070804 NA intron (NM_153537, intron 1 of 21) intron (NM_153537, intron 1 of 21) 6490 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-31 chr3 27649348 27650071 + 0.844317084070804 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 60743 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-25 chr19 6076361 6076557 + 0.844317084070804 NA exon (NM_001081041, exon 2 of 10) exon (NM_001081041, exon 2 of 10) 728 NM_001081041 68505 Mm.227361 NM_001081041 ENSMUSG00000024799 Vps51 1110014N23Rik|3110057M17Rik|AI837850|Ffr VPS51 GARP complex subunit protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-17 chr16 55505036 55505282 + 0.844317084070804 NA Intergenic Intergenic 10428 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-8 chr7 35586287 35586506 + 0.844317084070804 NA promoter-TSS (NM_145840) promoter-TSS (NM_145840) 149 NR_152519 245886 Mm.272620 NM_145633 ENSMUSG00000034867 Ankrd27 AA408090|BC016493|D330003H11Rik|Varp ankyrin repeat domain 27 (VPS9 domain) protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-8 chr6 91653886 91654094 + 0.844317084070804 NA Intergenic Intergenic -30077 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-17 chr14 25478950 25479393 + 0.844317084070804 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 19986 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-19 chr3 55354429 55354677 + 0.844317084070804 NA intron (NM_001357475, intron 3 of 16) intron (NM_001357475, intron 3 of 16) -107175 NM_001195539 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804 chr10 80702740 80703119 + 0.844317084070804 NA exon (NM_027829, exon 1 of 10) exon (NM_027829, exon 1 of 10) 236 NM_027829 71564 Mm.35802 NM_027829 ENSMUSG00000055862 Izumo4 9030607L17Rik|AI550407 IZUMO family member 4 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-5 chr10 4027179 4027438 + 0.844317084070804 NA intron (NM_001170785, intron 11 of 27) intron (NM_001170785, intron 11 of 27) 54233 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-4 chr11 97700658 97701147 + 0.844317084070804 NA promoter-TSS (NM_009545) promoter-TSS (NM_009545) -405 NM_009545 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-42 chr9 111438612 111438822 + 0.844317084070804 NA promoter-TSS (NM_172928) promoter-TSS (NM_172928) -364 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-9 chr10 120623638 120623868 + 0.844317084070804 NA Intergenic Intergenic -141979 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-29 chr2 27889216 27889451 + 0.844317084070804 NA intron (NM_015734, intron 1 of 65) intron (NM_015734, intron 1 of 65) 2908 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-43 chrX 7740585 7740942 + 0.844317084070804 NA intron (NM_207202, intron 1 of 9) intron (NM_207202, intron 1 of 9) 561 NM_207202 54648 Mm.63342 NM_207202 ENSMUSG00000031150 Ccdc120 AA030924|DXImx50e|Jm11|Sfc25 coiled-coil domain containing 120 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-12 chr16 66970274 66970799 + 0.844317084070804 NA intron (NM_178721, intron 1 of 9) intron (NM_178721, intron 1 of 9) 313418 NR_040512 75501 Mm.394300 NR_040512 ENSMUSG00000092599 1700010K23Rik - RIKEN cDNA 1700010K23 gene ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-30 chr2 125948582 125948820 + 0.844317084070804 NA intron (NM_175154, intron 8 of 9) intron (NM_175154, intron 8 of 9) 82478 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-32 chr5 113153142 113153519 + 0.844317084070804 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 9983 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-6 chr10 80855492 80855749 + 0.844317084070804 NA promoter-TSS (NM_025349) promoter-TSS (NM_025349) 345 NM_175195 73218 Mm.3285 NM_175195 ENSMUSG00000035206 Sppl2b 3110056O03Rik|AW550292|PSL1 signal peptide peptidase like 2B protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-20 chr17 24069439 24069720 + 0.844317084070804 NA intron (NM_027008, intron 1 of 5) intron (NM_027008, intron 1 of 5) 3906 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804 chr1 12715967 12716279 + 0.844317084070804 NA intron (NM_001198566, intron 1 of 20) intron (NM_001198566, intron 1 of 20) -2422 NM_172294 240725 Mm.45563 NM_172294 ENSMUSG00000016918 Sulf1 AI467640|AW121680|mKIAA1077 sulfatase 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-41 chr7 133101178 133101469 + 0.844317084070804 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -19463 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-13 chr14 78538275 78538755 + 0.844317084070804 NA Intergenic Intergenic -1655 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-2 chr1 134556657 134556907 + 0.844317084070804 NA Intergenic CpG -3396 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-3 chr10 67720559 67720896 + 0.844317084070804 NA Intergenic Intergenic -148768 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-33 chr5 124425780 124426003 + 0.844317084070804 NA promoter-TSS (NM_001359978) promoter-TSS (NM_001359978) 66 NM_001081203 243272 Mm.23879 NM_145631 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-37 chr6 137127015 137127253 + 0.844317084070804 NA intron (NM_181988, intron 2 of 4) intron (NM_181988, intron 2 of 4) 42584 NM_001164214 232441 Mm.46233 NM_181988 ENSMUSG00000030222 Rerg - RAS-like, estrogen-regulated, growth-inhibitor protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-2 chr1 131072749 131073153 + 0.844317084070804 NA intron (NM_008551, intron 1 of 9) MIR|SINE|MIR 24892 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-4 chr2 153432500 153432770 + 0.844317084070804 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 11844 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-7 chr6 34714559 34714848 + 0.844317084070804 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 5259 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-24 chr18 33659847 33660077 + 0.844317084070804 NA Intergenic Intergenic -134930 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-33 chr3 95701990 95702185 + 0.844317084070804 NA Intergenic Intergenic -14170 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-34 chr5 135957255 135957555 + 0.844317084070804 NA Intergenic Intergenic 17071 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-11 chr8 105860172 105860386 + 0.844317084070804 NA promoter-TSS (NM_001357229) promoter-TSS (NM_001357229) -254 NM_026532 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-5 chr3 105051131 105051372 + 0.844317084070804 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 1702 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-3 chr14 61647444 61647664 + 0.844317084070804 NA intron (NR_028264, intron 1 of 6) intron (NR_028264, intron 1 of 6) -15444 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-28 chr2 27232924 27233140 + 0.844317084070804 NA intron (NM_138665, intron 8 of 20) intron (NM_138665, intron 8 of 20) 14271 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-8 chr10 91183394 91184004 + 0.844317084070804 NA Intergenic Intergenic -12080 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-23 chr7 143068853 143069071 + 0.844317084070804 NA promoter-TSS (NM_001115085) promoter-TSS (NM_001115085) -406 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-40 chr8 79641087 79641410 + 0.844317084070804 NA intron (NM_001081164, intron 1 of 20) intron (NM_001081164, intron 1 of 20) 1572 NM_001081164 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-16 chr2 29690742 29690990 + 0.844317084070804 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -70662 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804 chr1 105423792 105424020 + 0.844317084070804 NA Intergenic Intergenic -67196 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-7 chr10 86309839 86310034 + 0.844317084070804 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 9524 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-21 chr15 76723552 76723758 + 0.844317084070804 NA TTS (NM_001168288) TTS (NM_001168288) 190 NM_145472 223665 Mm.291713 NM_145472 ENSMUSG00000116138 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-2 chr1 82833043 82833265 + 0.844317084070804 NA Intergenic Intergenic -6306 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak2_19_9_0.727768848084312_3.68581251892952_0.844317084070804-2 chr7 101345009 101345254 + 0.844317084070804 NA intron (NM_019990, intron 5 of 6) intron (NM_019990, intron 5 of 6) -2938 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-12 chr11 69990566 69990851 + 0.844317084070804 NA promoter-TSS (NM_019749) promoter-TSS (NM_019749) -662 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-12 chr14 25451317 25451567 + 0.844317084070804 NA Intergenic Intergenic -7743 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-43 chr8 33799397 33799667 + 0.844317084070804 NA intron (NM_001286168, intron 5 of 7) intron (NM_001286168, intron 5 of 7) -51762 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-15 chr13 51946505 51946761 + 0.844317084070804 NA Intergenic Intergenic 99958 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-11 chr13 70644934 70645248 + 0.844317084070804 NA Intergenic Intergenic -7457 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-15 chr15 83143434 83143705 + 0.844317084070804 NA intron (NM_001347082, intron 1 of 7) B2_Mm2|SINE|B2 5809 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-3 chr1 159595335 159595601 + 0.844317084070804 NA intron (NM_022312, intron 1 of 22) intron (NM_022312, intron 1 of 22) 71699 NM_022312 21960 Mm.44701 NM_022312 ENSMUSG00000015829 Tnr J1-tenascin|TN-R|janusin|restrictin tenascin R protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-12 chrX 152732417 152732640 + 0.844317084070804 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 36958 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-24 chr15 102956776 102957047 + 0.844317084070804 NA TTS (NM_001024842) TTS (NM_001024842) 2385 NM_001024842 109663 Mm.37692 NM_001024842 ENSMUSG00000001656 Hoxc11 Hox-3.7 homeobox C11 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-7 chr10 59431305 59431627 + 0.844317084070804 NA intron (NM_010959, intron 4 of 8) intron (NM_010959, intron 4 of 8) 10313 NM_010959 18302 Mm.123013 NM_010959 ENSMUSG00000009654 Oit3 EF-9|LZP oncoprotein induced transcript 3 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-24 chr7 144941851 144942121 + 0.844317084070804 NA Intergenic Intergenic -2061 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-44 chr8 35321598 35321911 + 0.844317084070804 NA Intergenic Intergenic -53987 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-27 chr19 36348042 36348300 + 0.844317084070804 NA Intergenic Intergenic -30896 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-5 chr5 91105082 91105408 + 0.844317084070804 NA Intergenic Intergenic 30628 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-11 chr11 44325846 44326269 + 0.844317084070804 NA Intergenic Intergenic -74006 NM_001303244 16160 Mm.239707 NM_008352 ENSMUSG00000004296 Il12b Il-12b|Il-12p40|Il12p40|p40 interleukin 12b protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-32 chr3 51649844 51650070 + 0.844317084070804 NA Intergenic Intergenic -11222 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-6 chr4 136286226 136286468 + 0.844317084070804 NA 5' UTR (NM_009557, exon 1 of 3) 5' UTR (NM_009557, exon 1 of 3) 280 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-4 chr1 172027406 172027762 + 0.844317084070804 NA promoter-TSS (NM_033509) promoter-TSS (NM_033509) -289 NM_033509 93840 Mm.36148 NM_033509 ENSMUSG00000026556 Vangl2 C530001F03Rik|Lootl|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska|stbm|strabismus VANGL planar cell polarity 2 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-17 chr2 145282480 145283059 + 0.844317084070804 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 40158 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-7 chr4 135963884 135964121 + 0.844317084070804 NA intron (NM_001356493, intron 1 of 10) CpG 277 NM_001356493 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-10 chr16 14025321 14025867 + 0.844317084070804 NA intron (NM_144518, intron 1 of 5) intron (NM_144518, intron 1 of 5) -38727 NM_001270718 74482 Mm.484026 NM_028968 ENSMUSG00000065968 Ifitm7 4933438K12Rik|Mil4 interferon induced transmembrane protein 7 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-23 chr15 88734437 88734673 + 0.844317084070804 NA promoter-TSS (NM_001033274) promoter-TSS (NM_001033274) -336 NM_001033274 223770 Mm.254438 NM_001033274 ENSMUSG00000022387 Brd1 1110059H06Rik|AI316859|mKIAA4191 bromodomain containing 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-10 chr13 12815822 12816174 + 0.844317084070804 NA Intergenic Intergenic -15919 NM_011118 18812 Mm.457984 NM_011118 ENSMUSG00000056457 Prl2c3 Ghd1|MRP-2|MRP-3|Mrpplf3|PLF-2|PLF-3|Plf2|Prl2c4|mrp/plf3 prolactin family 2, subfamily c, member 3 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-34 chr3 122481023 122481309 + 0.844317084070804 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -2403 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-18 chr14 54103170 54103496 + 0.844317084070804 NA Intergenic Intergenic 150596 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-36 chr6 88116523 88116975 + 0.844317084070804 NA Intergenic Intergenic -12491 NR_105795 102465196 NR_105795 ENSMUSG00000099095 Mir6376 Gm27778|mmu-mir-6376 microRNA 6376 ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-22 chr17 66720760 66721031 + 0.844317084070804 NA TTS (NR_151453) TTS (NR_151453) 6439 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-14 chr15 74958678 74958985 + 0.844317084070804 NA 3' UTR (NM_001164036, exon 4 of 4) 3' UTR (NM_001164036, exon 4 of 4) 3725 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-39 chr8 35918593 35918830 + 0.844317084070804 NA Intergenic Intergenic -35754 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-38 chr5 137031767 137032086 + 0.844317084070804 NA exon (NM_001039385, exon 2 of 2) exon (NM_001039385, exon 2 of 2) 1631 NM_001039385 381677 Mm.389697 NM_001039385 ENSMUSG00000037428 Vgf Gm1052 VGF nerve growth factor inducible protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-3 chr1 171270334 171270540 + 0.844317084070804 NA intron (NM_020579, intron 1 of 7) CpG 109 NM_020579 57370 Mm.274011 NM_020579 ENSMUSG00000052423 B4galt3 9530061M23Rik|AA104562|AW125175|ESTM26|ESTM6|R74981 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-10 chr10 120701765 120701961 + 0.844317084070804 NA Intergenic Intergenic -63869 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-13 chr11 74897310 74897547 + 0.844317084070804 NA promoter-TSS (NM_177325) promoter-TSS (NM_177325) -348 NM_197943 97761 Mm.245894 NM_197943 ENSMUSG00000038351 Sgsm2 D630003G22Rik|R74628|Rutbc1|mKIAA0397 small G protein signaling modulator 2 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-26 chr19 32279924 32280249 + 0.844317084070804 NA intron (NM_001168525, intron 2 of 9) intron (NM_001168525, intron 2 of 9) -69073 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-31 chr5 5663804 5664062 + 0.844317084070804 NA TTS (NM_001103156) TTS (NM_001103156) 299 NM_172447 207686 Mm.319007 NM_172447 ENSMUSG00000040473 Cfap69 4921525K03|A330021E22Rik|AI427898 cilia and flagella associated protein 69 protein-coding common_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-4 chr18 38144467 38144659 + 0.844317084070804 NA Intergenic Intergenic 65199 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-21 chr6 85937097 85937337 + 0.844317084070804 NA Intergenic CpG 21246 NM_001362065 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-9 chr16 13159467 13159719 + 0.844317084070804 NA Intergenic Intergenic 49857 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-5 chr10 77085765 77086307 + 0.844317084070804 NA intron (NM_001109991, intron 4 of 40) intron (NM_001109991, intron 4 of 40) 27669 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-19 chr16 59505498 59505901 + 0.844317084070804 NA intron (NM_174848, intron 15 of 18) intron (NM_174848, intron 15 of 18) 33924 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Riox2 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204|Mina ribosomal oxygenase 2 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-16 chr13 72226431 72226859 + 0.844317084070804 NA Intergenic Intergenic -262922 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak2_20_9_0.797661580705262_3.72075888523999_0.844317084070804 chr4 45512800 45513054 + 0.844317084070804 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 17901 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-18 chr16 56717145 56717392 + 0.844317084070804 NA 5' UTR (NM_001252443, exon 1 of 7) 5' UTR (NM_001252443, exon 1 of 7) 182 NM_001357124 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-5 chr3 27691049 27691329 + 0.844317084070804 NA intron (NM_001356953, intron 1 of 26) MLT1O|LTR|ERVL-MaLR 19263 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-18 chr3 37645376 37645651 + 0.844317084070804 NA TTS (NM_001305442) TTS (NM_001305442) 5566 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-37 chr5 57717595 57717827 + 0.844317084070804 NA promoter-TSS (NM_018764) promoter-TSS (NM_018764) 208 NR_015588 319216 Mm.332387 NR_015588 ENSMUSG00000097216 4932441J04Rik - RIKEN cDNA 4932441J04 gene ncRNA common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-6 chr4 57955082 57955297 + 0.844317084070804 NA intron (NM_011660, intron 1 of 4) intron (NM_011660, intron 1 of 4) 1222 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-8 chr8 68117119 68117319 + 0.844317084070804 NA Intergenic Intergenic -142645 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-9 chr11 65162472 65162817 + 0.844317084070804 NA 5' UTR (NM_175003, exon 1 of 21) 5' UTR (NM_175003, exon 1 of 21) 317 NM_001099288 216831 Mm.134338 NM_175003 ENSMUSG00000033389 Arhgap44 6330543G20|AI840762|AU040829|AW493732|Rich2 Rho GTPase activating protein 44 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-28 chr19 40404660 40404901 + 0.844317084070804 NA intron (NM_001034962, intron 1 of 22) intron (NM_001034962, intron 1 of 22) -2470 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-8 chr14 69447553 69447936 + 0.844317084070804 NA Intergenic Intergenic 64805 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-2 chr14 54106104 54106373 + 0.844317084070804 NA Intergenic Intergenic 147691 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_20_9_0.797661580705262_3.72075888523999_0.844317084070804-26 chr17 46704632 46704955 + 0.844317084070804 NA intron (NM_001357684, intron 1 of 14) CpG 209 NM_009358 21770 Mm.295009 NM_009358 ENSMUSG00000059409 Ppp2r5d B'delta|TEG-271|Tex271 protein phosphatase 2, regulatory subunit B', delta protein-coding unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-22 chr7 49092642 49092935 + 0.844317084070804 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 69370 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA unique_peak2_10_17_-0.976639639698763_3.68160518159293_0.844317084070804-15 chr19 5989823 5990091 + 0.844317084070804 NA intron (NM_001110504, intron 21 of 21) intron (NM_001110504, intron 21 of 21) -3814 NM_198650 381203 Mm.329638 NM_198650 ENSMUSG00000037451 Slc22a20 Gm963|OAT1-L|mOAT6 solute carrier family 22 (organic anion transporter), member 20 protein-coding unique_peak1_19_9_0.727768848084312_3.68581251892952_0.844317084070804-42 chr7 142382648 142383048 + 0.844317084070804 NA intron (NM_009983, intron 3 of 8) intron (NM_009983, intron 3 of 8) 5022 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802 chr1 127773259 127773830 + 0.844067898188802 NA promoter-TSS (NM_028399) promoter-TSS (NM_028399) 510 NR_045298 100502745 Mm.440061 NR_045298 ENSMUSG00000102014 2900009J06Rik - RIKEN cDNA 2900009J06 gene ncRNA common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-4 chr14 52104539 52104825 + 0.844067898188802 NA promoter-TSS (NM_001360176) promoter-TSS (NM_001360176) -661 NM_001360180 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-4 chr16 73482356 73483188 + 0.844067898188802 NA Intergenic Intergenic 819623 NM_019413 19876 Mm.310772 NM_019413 ENSMUSG00000022883 Robo1 AW494633|AW742721|DUTT1|Gm310 roundabout guidance receptor 1 protein-coding common_peak2_41_23_0.527572195298224_4.84874859837027_0.844067898188802-2 chr6 52158556 52158761 + 0.844067898188802 NA promoter-TSS (NM_001311118) promoter-TSS (NM_001311118) 134 NR_131181 105242658 Mm.372521 NR_131181 ENSMUSG00000087658 Hotairm1 Gm15051|Hoxaas1 Hoxa transcript antisense RNA, myeloid-specific 1 ncRNA common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-7 chr3 58310342 58311152 + 0.844067898188802 NA Intergenic ORR1F|LTR|ERVL-MaLR -103973 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802 chr1 72599593 72600389 + 0.844067898188802 NA intron (NM_018817, intron 8 of 16) intron (NM_018817, intron 8 of 16) 16740 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding common_peak2_41_23_0.527572195298224_4.84874859837027_0.844067898188802 chr11 70844785 70845064 + 0.844067898188802 NA 5' UTR (NM_001291143, exon 1 of 19) 5' UTR (NM_001291143, exon 1 of 19) 163 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding common_peak2_42_23_0.561280029488276_4.86560251546529_0.844067898188802 chr14 56885806 56886301 + 0.844067898188802 NA promoter-TSS (NM_029498) promoter-TSS (NM_029498) -550 NM_177627 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802-3 chr11 103016786 103017015 + 0.844067898188802 NA intron (NM_026551, intron 1 of 4) CpG 247 NM_026551 68087 Mm.277449 NM_026551 ENSMUSG00000020935 Dcakd 3010024O21Rik|6720485C15Rik|AI849483 dephospho-CoA kinase domain containing protein-coding unique_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-2 chr11 62648813 62649507 + 0.844067898188802 NA promoter-TSS (NM_198861) promoter-TSS (NM_198861) 496 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802 chr1 75218603 75219295 + 0.844067898188802 NA intron (NM_001313723, intron 1 of 3) intron (NM_001313723, intron 1 of 3) 345 NM_001313723 22145 Mm.1155 NM_009447 ENSMUSG00000026202 Tuba4a M[a]4|Tuba4 tubulin, alpha 4A protein-coding common_peak1_27_35_-0.638225907650387_4.85081204761712_0.844067898188802-2 chr5 88565189 88565433 + 0.844067898188802 NA exon (NM_001289775, exon 1 of 13) exon (NM_001289775, exon 1 of 13) 271 NM_001289775 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-2 chr1 171246588 171247094 + 0.844067898188802 NA intron (NM_153064, intron 1 of 12) intron (NM_153064, intron 1 of 12) 281 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak1_27_35_-0.638225907650387_4.85081204761712_0.844067898188802 chr1 155075230 155075512 + 0.844067898188802 NA intron (NR_151545, intron 3 of 6) intron (NR_151545, intron 3 of 6) 7893 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA unique_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802 chr13 107830386 107831083 + 0.844067898188802 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 59330 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-3 chr2 128575745 128576461 + 0.844067898188802 NA Intergenic Intergenic -16238 NM_001310641 241634 Mm.297682 NM_001310641 ENSMUSG00000074812 Spdye4c Gm355|SpeedyB3|SpyB3 speedy/RINGO cell cycle regulator family, member E4C protein-coding unique_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-2 chr17 35673228 35673689 + 0.844067898188802 NA intron (NM_010364, intron 1 of 13) intron (NM_010364, intron 1 of 13) 285 NM_010364 14885 Mm.10182 NM_010364 ENSMUSG00000001524 Gtf2h4 AW545633|BTF2 p52|p52 general transcription factor II H, polypeptide 4 protein-coding common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-7 chr9 88276935 88277706 + 0.844067898188802 NA Intergenic Intergenic -50289 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802-5 chr2 84528054 84528396 + 0.844067898188802 NA Intergenic Intergenic -21352 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-8 chr4 59819401 59819956 + 0.844067898188802 NA intron (NM_172468, intron 1 of 8) intron (NM_172468, intron 1 of 8) 14028 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak2_42_23_0.561280029488276_4.86560251546529_0.844067898188802-2 chr5 92434559 92435082 + 0.844067898188802 NA intron (NM_001359995, intron 1 of 12) CpG 379 NM_001359995 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-9 chr5 31631939 31632440 + 0.844067898188802 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 18238 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding unique_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802 chr8 119436652 119437042 + 0.844067898188802 NA promoter-TSS (NM_027950) promoter-TSS (NM_027950) -315 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802-2 chr11 74832461 74832909 + 0.844067898188802 NA intron (NM_010813, intron 1 of 5) intron (NM_010813, intron 1 of 5) 1761 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding unique_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-4 chr2 167823444 167824042 + 0.844067898188802 NA Intergenic Intergenic -108584 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-5 chr17 35241211 35241623 + 0.844067898188802 NA promoter-TSS (NM_019693) promoter-TSS (NM_019693) -329 NM_019693 53817 Mm.439827 NM_019693 ENSMUSG00000019432 Ddx39b 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-3 chr14 25497818 25498245 + 0.844067898188802 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) -36408 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802-4 chr17 35836580 35837037 + 0.844067898188802 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 1493 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-6 chr3 19204244 19204806 + 0.844067898188802 NA intron (NM_001356295, intron 2 of 7) intron (NM_001356295, intron 2 of 7) 16230 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding common_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802 chr1 119648341 119648961 + 0.844067898188802 NA intron (NM_145506, intron 1 of 24) CpG 349 NM_001113416 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-2 chr11 55417812 55418230 + 0.844067898188802 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 2059 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak2_27_35_-0.638225907650387_4.85081204761712_0.844067898188802-6 chr5 64878497 64879115 + 0.844067898188802 NA Intergenic Intergenic 53893 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-10 chr5 142964402 142964855 + 0.844067898188802 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 4273 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-5 chr17 45791623 45792001 + 0.844067898188802 NA Intergenic Intergenic 57306 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_42_23_0.561280029488276_4.86560251546529_0.844067898188802-3 chr15 79368983 79369690 + 0.844067898188802 NA intron (NM_172608, intron 5 of 8) intron (NM_172608, intron 5 of 8) 5964 NR_035464 100316695 NR_035464 ENSMUSG00000088901 Mir1943 mir-1943|mmu-mir-1943 microRNA 1943 ncRNA common_peak1_41_23_0.527572195298224_4.84874859837027_0.844067898188802-6 chr18 75449811 75450401 + 0.844067898188802 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -64539 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_67_74_-0.426042812732673_6.01579728412954_0.843970404532257 chr1 186580866 186581721 + 0.843970404532257 NA Intergenic Intergenic -22612 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_89_56_0.371423153688598_6.01860159100904_0.843970404532257 chr4 105402874 105404193 + 0.843970404532257 NA Intergenic G-rich|Low_complexity|Low_complexity 246186 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_89_56_0.371423153688598_6.01860159100904_0.843970404532257-2 chr8 123633192 123634481 + 0.843970404532257 NA Intergenic Intergenic -20093 NM_133955 69581 Mm.168257 NM_133955 ENSMUSG00000039960 Rhou 2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K ras homolog family member U protein-coding common_peak2_67_74_-0.426042812732673_6.01579728412954_0.843970404532257-2 chr8 125344250 125344875 + 0.843970404532257 NA Intergenic Intergenic 148271 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_67_74_-0.426042812732673_6.01579728412954_0.843970404532257 chr11 53794992 53795722 + 0.843970404532257 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 24884 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_89_56_0.371423153688598_6.01860159100904_0.843970404532257 chr15 102962341 102962947 + 0.843970404532257 NA Intergenic Intergenic -4152 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding common_peak1_131_86_0.310012529402542_6.59794976055_0.84394594754988 chr2 32711969 32713438 + 0.84394594754988 NA promoter-TSS (NM_130860) promoter-TSS (NM_130860) 81 NM_130860 107951 Mm.27557 NM_130860 ENSMUSG00000009555 Cdk9 PITALRE cyclin-dependent kinase 9 (CDC2-related kinase) protein-coding common_peak2_104_108_-0.343047709576911_6.59666046998847_0.843945947549855 chr7 29982946 29984354 + 0.843945947549855 NA promoter-TSS (NM_001167873) promoter-TSS (NM_001167873) -305 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak1_104_108_-0.343047709576911_6.59666046998847_0.843945947549855 chr4 139351591 139353137 + 0.843945947549855 NA promoter-TSS (NM_001039200) promoter-TSS (NM_001039200) 212 NM_001290810 69902 Mm.27871 NM_023536 ENSMUSG00000028741 Mrto4 2610012O22Rik|Mg684|Mrt4 mRNA turnover 4, ribosome maturation factor protein-coding common_peak1_120_78_0.324530012799221_6.46604575457671_0.843334357163798 chr2 77945446 77946403 + 0.843334357163798 NA intron (NM_030560, intron 1 of 20) CpG 432 NM_001290740 80744 Mm.288151 NM_030560 ENSMUSG00000027014 Cwc22 AA684037|AI173004|AL022752|B230213M24|mKIAA1604 CWC22 spliceosome-associated protein protein-coding common_peak2_76_82_-0.394204979175735_6.17793694175906_0.843209553910341 chr1 40274207 40275288 + 0.843209553910341 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 8161 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_99_63_0.355243882579064_6.17762194128953_0.843209553910341-4 chr4 4792678 4793312 + 0.843209553910341 NA exon (NM_177730, exon 1 of 5) exon (NM_177730, exon 1 of 5) 311 NM_177730 242291 Mm.218889 NM_177730 ENSMUSG00000066324 Impad1 1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP inositol monophosphatase domain containing 1 protein-coding common_peak1_99_63_0.355243882579064_6.17762194128953_0.843209553910341 chr10 50592032 50593421 + 0.843209553910341 NA promoter-TSS (NM_198007) promoter-TSS (NM_198007) 57 NM_198007 77987 Mm.222497 NM_198007 ENSMUSG00000038774 Ascc3 ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding common_peak1_99_63_0.355243882579064_6.17762194128953_0.843209553910341-2 chr10 120717487 120718678 + 0.843209553910341 NA Intergenic Intergenic -47650 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_99_63_0.355243882579064_6.17762194128953_0.843209553910341-3 chr11 79738340 79739151 + 0.843209553910341 NA Intergenic Intergenic 12345 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak1_137_138_-0.302307148273043_6.96778749858699_0.842632852579755 chr18 31759561 31760875 + 0.842632852579755 NA promoter-TSS (NM_001242430) promoter-TSS (NM_001242430) 394 NM_153515 225339 Mm.290804 NM_153515 ENSMUSG00000041915 Ammecr1l 5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik AMME chromosomal region gene 1-like protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-10 chr4 134853500 134853814 + 0.841847921495509 NA promoter-TSS (NM_001355501) promoter-TSS (NM_001355501) -312 NM_025382 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-14 chr9 56937578 56938058 + 0.841847921495509 NA exon (NM_133976, exon 1 of 1) exon (NM_133976, exon 1 of 1) 318 NM_133976 102462 Mm.12864 NM_133976 ENSMUSG00000032288 Imp3 1190002L16Rik|AI256594 IMP3, U3 small nucleolar ribonucleoprotein protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-8 chr7 37929087 37929520 + 0.841847921495509 NA Intergenic Intergenic 90249 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-11 chr5 32746103 32746413 + 0.841847921495509 NA promoter-TSS (NM_001347332) promoter-TSS (NM_001347332) 84 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-6 chr19 42129455 42129788 + 0.841847921495509 NA promoter-TSS (NM_027106) promoter-TSS (NM_027106) -628 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509 chr1 91298351 91298712 + 0.841847921495509 NA intron (NM_016717, intron 1 of 11) CpG 193 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-7 chr2 29944968 29945321 + 0.841847921495509 NA intron (NM_028923, intron 9 of 15) intron (NM_028923, intron 9 of 15) 9735 NM_028923 74412 Mm.275121 NM_028923 ENSMUSG00000019715 Gle1 4933405K21Rik|AA553313|Gle1l GLE1 RNA export mediator (yeast) protein-coding common_peak1_22_30_-0.704288029017376_4.60205229587819_0.841847921495509 chr17 35979999 35980218 + 0.841847921495509 NA promoter-TSS (NM_001165892) promoter-TSS (NM_001165892) 153 NM_008136 14670 Mm.335754 NM_008136 ENSMUSG00000024429 Gnl1 Gna-rs1|Gnal1 guanine nucleotide binding protein-like 1 protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509 chr10 31607323 31607852 + 0.841847921495509 NA intron (NM_001146349, intron 1 of 5) intron (NM_001146349, intron 1 of 5) 2138 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-3 chr14 21593389 21593815 + 0.841847921495509 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 93817 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-2 chr13 45849551 45849988 + 0.841847921495509 NA intron (NM_001199304, intron 3 of 6) intron (NM_001199304, intron 3 of 6) 115222 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-3 chr3 31494771 31495275 + 0.841847921495509 NA Intergenic MLTR14|LTR|ERV1 -184704 NM_172861 241919 Mm.285366 NM_172861 ENSMUSG00000069072 Slc7a14 A930013N06|BC061928 solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509 chr11 85353251 85353680 + 0.841847921495509 NA intron (NM_001166643, intron 1 of 23) intron (NM_001166643, intron 1 of 23) 301 NM_001166643 192197 Mm.209989 NM_138681 ENSMUSG00000059439 Bcas3 1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira breast carcinoma amplified sequence 3 protein-coding common_peak2_35_19_0.569783153785342_4.60681967178003_0.841847921495509-2 chr8 34047880 34048326 + 0.841847921495509 NA Intergenic Intergenic 59711 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-5 chr19 28183450 28183790 + 0.841847921495509 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -172454 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_35_19_0.569783153785342_4.60681967178003_0.841847921495509-3 chr9 114016033 114016374 + 0.841847921495509 NA intron (NM_178624, intron 2 of 14) intron (NM_178624, intron 2 of 14) 10548 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-6 chr15 83448480 83448897 + 0.841847921495509 NA promoter-TSS (NM_001358644) promoter-TSS (NM_001358644) -808 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-3 chr11 115842382 115842737 + 0.841847921495509 NA intron (NM_001252532, intron 2 of 25) intron (NM_001252532, intron 2 of 25) 18501 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-5 chr5 91610040 91610742 + 0.841847921495509 NA intron (NM_145562, intron 2 of 3) intron (NM_145562, intron 2 of 3) 92691 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-2 chr11 119988562 119988975 + 0.841847921495509 NA intron (NM_001037754, intron 6 of 13) intron (NM_001037754, intron 6 of 13) -25999 NR_037225 100526518 NR_037225 ENSMUSG00000105524 Mir3065 mir-3065|mmu-mir-3065 microRNA 3065 ncRNA common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-12 chr7 132737156 132737535 + 0.841847921495509 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 39571 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-15 chr9 58447440 58447796 + 0.841847921495509 NA Intergenic Intergenic -7555 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-9 chr8 90956508 90957056 + 0.841847921495509 NA intron (NM_177224, intron 4 of 39) intron (NM_177224, intron 4 of 39) 24533 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-6 chr6 89008148 89008564 + 0.841847921495509 NA Intergenic Intergenic -87754 NR_134978 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-9 chr2 114201133 114201525 + 0.841847921495509 NA intron (NM_175466, intron 1 of 1) CpG 103 NM_175466 228491 Mm.132523 NM_175466 ENSMUSG00000040321 Zfp770 6430601A21Rik|Znf770 zinc finger protein 770 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-8 chr2 84519256 84519913 + 0.841847921495509 NA Intergenic Intergenic -12711 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-4 chr15 55266029 55266436 + 0.841847921495509 NA Intergenic Intergenic -41518 NM_181277 12818 Mm.297859 NM_181277 ENSMUSG00000022371 Col14a1 5730412L22Rik|AW108078 collagen, type XIV, alpha 1 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-12 chr7 120981940 120982246 + 0.841847921495509 NA promoter-TSS (NM_028955) promoter-TSS (NM_028955) 219 NM_007672 12585 Mm.1640 NM_007672 ENSMUSG00000030878 Cdr2 AA617262 cerebellar degeneration-related 2 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-8 chr2 103760792 103761174 + 0.841847921495509 NA intron (NM_153126, intron 1 of 28) CpG 287 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-11 chr5 149385850 149386534 + 0.841847921495509 NA Intergenic Intergenic -25557 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-5 chr15 59448204 59448663 + 0.841847921495509 NA intron (NM_001164604, intron 3 of 4) intron (NM_001164604, intron 3 of 4) 74235 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-2 chr1 183297592 183297965 + 0.841847921495509 NA promoter-TSS (NM_027861) promoter-TSS (NM_027861) -485 NR_151660 71678 Mm.392270 NM_027861 ENSMUSG00000046836 Brox 0610010K06Rik BRO1 domain and CAAX motif containing protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-4 chr16 5255647 5255933 + 0.841847921495509 NA intron (NM_027446, intron 1 of 7) CpG 166 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-7 chr6 134700541 134701102 + 0.841847921495509 NA intron (NM_001170479, intron 3 of 3) intron (NM_001170479, intron 3 of 3) 59881 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-7 chr2 85246169 85246592 + 0.841847921495509 NA Intergenic Intergenic -49681 NM_001033346 241528 Mm.291095 NM_001033346 ENSMUSG00000075224 Lrrc55 A330097E02Rik|Gm351 leucine rich repeat containing 55 protein-coding unique_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-4 chr4 155281704 155282281 + 0.841847921495509 NA intron (NM_001355178, intron 7 of 14) intron (NM_001355178, intron 7 of 14) 32026 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509-13 chr8 25536836 25537193 + 0.841847921495509 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 18255 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-10 chr5 24821725 24822259 + 0.841847921495509 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 20369 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_35_19_0.569783153785342_4.60681967178003_0.841847921495509 chr2 120132571 120133099 + 0.841847921495509 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 21740 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak2_22_30_-0.704288029017376_4.60205229587819_0.841847921495509 chr13 32298878 32299459 + 0.841847921495509 NA intron (NM_146041, intron 1 of 10) intron (NM_146041, intron 1 of 10) 39376 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_35_19_0.569783153785342_4.60681967178003_0.841847921495509-9 chr3 88336197 88336530 + 0.841847921495509 NA 5' UTR (NM_178246, exon 1 of 22) 5' UTR (NM_178246, exon 1 of 22) 103 NM_178246 229512 Mm.439830 NM_173188 ENSMUSG00000001415 Smg5 BC024683|mKIAA1089 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_115_118_-0.326959721503922_6.73133790255598_0.841382904204196 chr15 77305764 77306797 + 0.841382904204196 NA intron (NM_053104, intron 1 of 13) CpG 773 NM_001110827 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak1_232_222_-0.233935465365978_7.68393216723732_0.84127971265184 chr7 66376055 66377588 + 0.84127971265184 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 4903 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_126_128_-0.313587633849338_6.85443343849859_0.841119897019223 chr16 31663299 31665393 + 0.841119897019223 NA intron (NM_001357282, intron 1 of 25) GC_rich|Low_complexity|Low_complexity 411 NM_001252434 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs large MAGUK scaffold protein 1 protein-coding common_peak1_156_104_0.287171793358284_6.85783141434526_0.841119897019198 chr1 134063353 134065561 + 0.841119897019198 NA Intergenic Intergenic 14698 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_156_104_0.287171793358284_6.85783141434526_0.841119897019198-2 chr11 115956594 115957997 + 0.841119897019198 NA intron (NM_020483, intron 4 of 10) intron (NM_020483, intron 4 of 10) -17430 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_14_21_-0.821844093864924_4.04850957170484_0.840839978588874 chr12 17510614 17510863 + 0.840839978588874 NA Intergenic Intergenic -34135 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-10 chr3 81016747 81017081 + 0.840839978588874 NA Intergenic Intergenic -19502 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-4 chr15 25640117 25640538 + 0.840839978588874 NA intron (NM_019472, intron 1 of 40) intron (NM_019472, intron 1 of 40) 17777 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-5 chr15 53140018 53140456 + 0.840839978588874 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 205946 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-8 chr18 81322702 81323278 + 0.840839978588874 NA Intergenic Intergenic -336412 NM_178280 20689 Mm.215917 NM_178280 ENSMUSG00000024565 Sall3 B130022O04Rik|Msal|Msal-1|Sal|Salt|Spalt spalt like transcription factor 3 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-22 chr7 133009317 133009796 + 0.840839978588874 NA intron (NM_001347623, intron 1 of 8) intron (NM_001347623, intron 1 of 8) 5691 NM_001170744 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-10 chr17 44600792 44601211 + 0.840839978588874 NA intron (NR_073425, intron 5 of 5) intron (NR_073425, intron 5 of 5) 135175 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-14 chr19 8984955 8985255 + 0.840839978588874 NA Intergenic Intergenic -4179 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-4 chr12 31267910 31268161 + 0.840839978588874 NA intron (NM_008482, intron 2 of 32) intron (NM_008482, intron 2 of 32) 2741 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-6 chr17 12275272 12275910 + 0.840839978588874 NA intron (NM_001357722, intron 2 of 25) intron (NM_001357722, intron 2 of 25) 43069 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-7 chr13 34060672 34061124 + 0.840839978588874 NA intron (NM_026512, intron 5 of 6) intron (NM_026512, intron 5 of 6) 17110 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-10 chr6 120357066 120357376 + 0.840839978588874 NA intron (NR_045558, intron 1 of 9) intron (NR_045558, intron 1 of 9) 248 NM_026028 67200 Mm.45767 NM_026028 ENSMUSG00000030177 Ccdc77 2400002C23Rik|2700091N06Rik|AV168274 coiled-coil domain containing 77 protein-coding common_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-4 chr2 32688007 32688339 + 0.840839978588874 NA promoter-TSS (NR_106168) promoter-TSS (NR_106168) -407 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-27 chr9 63716656 63717057 + 0.840839978588874 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 41138 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-2 chr5 32196307 32196528 + 0.840839978588874 NA Intergenic Intergenic -36291 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-3 chr11 60913970 60914356 + 0.840839978588874 NA promoter-TSS (NM_025294) promoter-TSS (NM_025294) -371 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-12 chr8 84990609 84990829 + 0.840839978588874 NA exon (NM_001167991, exon 1 of 22) exon (NM_001167991, exon 1 of 22) 124 NM_001167991 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_13_21_-0.920677545272128_3.99909284600123_0.840839978588874 chr4 136122954 136123157 + 0.840839978588874 NA Intergenic Intergenic -20767 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-2 chr12 102261104 102261811 + 0.840839978588874 NA intron (NM_172152, intron 14 of 16) ORR1E|LTR|ERVL-MaLR -21617 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-13 chr19 5294344 5294749 + 0.840839978588874 NA intron (NM_030109, intron 2 of 20) intron (NM_030109, intron 2 of 20) 909 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-12 chr18 75392057 75392355 + 0.840839978588874 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 24841 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-7 chr3 143778710 143779038 + 0.840839978588874 NA Intergenic Intergenic -66731 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874 chr1 91459814 91460260 + 0.840839978588874 NA promoter-TSS (NM_011066) promoter-TSS (NM_011066) -709 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-24 chr8 35662600 35662812 + 0.840839978588874 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -73686 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874 chr11 22002681 22003035 + 0.840839978588874 NA Intergenic CpG -1207 NM_011023 18423 Mm.129663 NM_011023 ENSMUSG00000005917 Otx1 A730044F23Rik|jv orthodenticle homeobox 1 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-5 chr16 18470566 18470969 + 0.840839978588874 NA intron (NM_001353143, intron 12 of 16) intron (NM_001353143, intron 12 of 16) -27946 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-10 chr17 24427158 24427451 + 0.840839978588874 NA intron (NM_010023, intron 2 of 6) intron (NM_010023, intron 2 of 6) 621 NM_010023 13177 Mm.291743 NM_010023 ENSMUSG00000024132 Eci1 Dci|eci enoyl-Coenzyme A delta isomerase 1 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-8 chr16 36990405 36990772 + 0.840839978588874 NA promoter-TSS (NM_001358217) promoter-TSS (NM_001358217) -121 NM_001358217 207215 Mm.211899 NM_001037321 ENSMUSG00000047746 Fbxo40 9830003A13Rik|mKIAA1195 F-box protein 40 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-9 chr3 79903719 79904156 + 0.840839978588874 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 18007 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-6 chr3 89391335 89391544 + 0.840839978588874 NA promoter-TSS (NR_040403) promoter-TSS (NR_040403) -425 NR_040403 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 - predicted gene 15417 ncRNA common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-4 chr19 18715952 18716181 + 0.840839978588874 NA intron (NM_177640, intron 1 of 1) intron (NM_177640, intron 1 of 1) 2830 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak1_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-3 chr6 37617509 37617710 + 0.840839978588874 NA Intergenic Intergenic 87436 NM_145364 208665 Mm.262635 NM_145364 ENSMUSG00000038641 Akr1d1 - aldo-keto reductase family 1, member D1 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-2 chr1 180944182 180944520 + 0.840839978588874 NA intron (NM_144794, intron 1 of 22) intron (NM_144794, intron 1 of 22) 1833 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-7 chr18 57465576 57465904 + 0.840839978588874 NA Intergenic Intergenic -2746 NM_001134697 629147 Mm.57415 NM_001134697 ENSMUSG00000069372 Ctxn3 - cortexin 3 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-12 chr2 12924267 12924735 + 0.840839978588874 NA intron (NM_008961, intron 1 of 4) intron (NM_008961, intron 1 of 4) 460 NM_001305437 19212 Mm.229322 NM_008961 ENSMUSG00000026730 Pter AI790318|Mpr56-1 phosphotriesterase related protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-18 chr3 102678736 102678936 + 0.840839978588874 NA Intergenic Intergenic -55934 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874 chr1 177442999 177443270 + 0.840839978588874 NA intron (NM_001355099, intron 1 of 1) intron (NM_001355099, intron 1 of 1) 783 NM_001355100 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238.|zfp-238 zinc finger and BTB domain containing 18 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-21 chr7 89564597 89564831 + 0.840839978588874 NA Intergenic Intergenic -37527 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-4 chr14 76760091 76760508 + 0.840839978588874 NA non-coding (NR_153763, exon 1 of 2) non-coding (NR_153763, exon 1 of 2) 168 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-8 chr4 156195859 156196208 + 0.840839978588874 NA intron (NM_021604, intron 1 of 35) intron (NM_021604, intron 1 of 35) 1455 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-9 chr5 105499906 105500105 + 0.840839978588874 NA Intergenic Intergenic -19466 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-18 chr8 124067511 124067778 + 0.840839978588874 NA Intergenic Intergenic 44171 NM_001029876 382038 Mm.334891 NM_001029876 ENSMUSG00000031976 Urb2 C77575|mKIAA0133 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-2 chr11 68467997 68468239 + 0.840839978588874 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) -34901 NM_001004435 104709 Mm.234573 NM_001004435 ENSMUSG00000046207 Pik3r6 BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 5 protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-4 chr15 102839010 102839218 + 0.840839978588874 NA Intergenic Intergenic -82017 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-11 chr18 36384135 36384724 + 0.840839978588874 NA intron (NM_001081365, intron 2 of 2) intron (NM_001081365, intron 2 of 2) 35805 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-4 chr11 74864127 74864711 + 0.840839978588874 NA intron (NM_197943, intron 11 of 22) intron (NM_197943, intron 11 of 22) 3775 NR_105891 102465558 NR_105891 ENSMUSG00000098317 Mir6926 Gm27949|mmu-mir-6926 microRNA 6926 ncRNA common_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-6 chr4 41315616 41315889 + 0.840839978588874 NA promoter-TSS (NM_026893) promoter-TSS (NM_026893) -851 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-3 chr16 11065751 11066026 + 0.840839978588874 NA promoter-TSS (NM_009223) promoter-TSS (NM_009223) -410 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-11 chr4 11919059 11919551 + 0.840839978588874 NA Intergenic Intergenic 46408 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-7 chr16 18247079 18247485 + 0.840839978588874 NA intron (NM_011239, intron 2 of 5) intron (NM_011239, intron 2 of 5) 1412 NM_011239 19385 Mm.235287 NM_011239 ENSMUSG00000005732 Ranbp1 Htf9a RAN binding protein 1 protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-5 chr15 5495597 5495820 + 0.840839978588874 NA promoter-TSS (NR_045274) promoter-TSS (NR_045274) -610 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-14 chr4 154025283 154025786 + 0.840839978588874 NA 5' UTR (NM_001163722, exon 2 of 4) 5' UTR (NM_001163722, exon 2 of 4) 510 NM_001163722 68859 Mm.477488 NM_001033144 ENSMUSG00000078350 Smim1 0610011H04Rik|1190007F08Rik|2700009I11Rik small integral membrane protein 1 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-3 chr14 69159905 69160279 + 0.840839978588874 NA Intergenic Intergenic -11710 NM_010920 18092 Mm.390691 NM_010920 ENSMUSG00000044186 Nkx2-6 AV044928|Nkx-2.6|Nkx2.6|Tix|tinman NK2 homeobox 6 protein-coding common_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-5 chr3 146404883 146405242 + 0.840839978588874 NA intron (NM_001253769, intron 1 of 13) CpG 420 NM_001355661 99167 Mm.200783 NM_138744 ENSMUSG00000036825 Ssx2ip AU014939|AU042321|Adip synovial sarcoma, X 2 interacting protein protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874 chr10 128673234 128673796 + 0.840839978588874 NA intron (NM_173733, intron 1 of 3) intron (NM_173733, intron 1 of 3) 403 NM_173733 211389 Mm.23352 NM_173733 ENSMUSG00000049858 Suox SO sulfite oxidase protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-26 chr9 57972485 57972709 + 0.840839978588874 NA Intergenic Intergenic -25427 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-15 chr19 59592777 59593167 + 0.840839978588874 NA Intergenic Intergenic 99836 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak2_24_12_0.66891412358446_4.03489677993332_0.840839978588874-4 chr3 103171810 103172013 + 0.840839978588874 NA intron (NM_001356330, intron 1 of 5) CpG 256 NM_001356331 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-17 chr8 68192015 68192315 + 0.840839978588874 NA Intergenic Intergenic -84363 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-3 chr17 26529715 26530029 + 0.840839978588874 NA Intergenic Intergenic -21400 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-11 chr7 118361276 118361916 + 0.840839978588874 NA Intergenic B4A|SINE|B4 81964 NM_001362180 110058 Mm.156558 NM_138649 ENSMUSG00000058420 Syt17 Bk|sytXVII synaptotagmin XVII protein-coding common_peak2_24_12_0.66891412358446_4.03489677993332_0.840839978588874-2 chr16 24734569 24734784 + 0.840839978588874 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 12821 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-3 chr14 76739630 76739991 + 0.840839978588874 NA Intergenic Intergenic -20321 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-2 chr12 8377986 8378442 + 0.840839978588874 NA Intergenic Intergenic 64781 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-14 chrX 56731001 56731439 + 0.840839978588874 NA promoter-TSS (NM_010211) promoter-TSS (NM_010211) -541 NM_010211 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-2 chr15 71890455 71890676 + 0.840839978588874 NA exon (NM_027174, exon 38 of 64) exon (NM_027174, exon 38 of 64) 143662 NM_027174 69700 Mm.322500 NM_027174 ENSMUSG00000079022 Col22a1 2310067L16Rik|C80743 collagen, type XXII, alpha 1 protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-8 chr5 143548994 143549208 + 0.840839978588874 NA 5' UTR (NM_026050, exon 1 of 3) 5' UTR (NM_026050, exon 1 of 3) 395 NM_026050 67238 Mm.383219 NM_026050 ENSMUSG00000083012 Fam220a 1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar family with sequence similarity 220, member A protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-3 chr10 70855679 70856016 + 0.840839978588874 NA Intergenic Intergenic -199884 NR_045292 319646 Mm.483039 NR_045291 ENSMUSG00000037747 D630013N20Rik - RIKEN cDNA D630013N20 gene ncRNA unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-6 chr15 60821444 60821729 + 0.840839978588874 NA 3' UTR (NM_001162926, exon 2 of 2) 3' UTR (NM_001162926, exon 2 of 2) -1379 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-23 chr8 26500194 26500593 + 0.840839978588874 NA Intergenic Intergenic 324030 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-14 chr5 74162343 74162861 + 0.840839978588874 NA Intergenic Intergenic -32724 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-17 chr3 79881723 79882004 + 0.840839978588874 NA Intergenic Intergenic -4067 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-6 chr8 109919146 109919441 + 0.840839978588874 NA intron (NM_001122594, intron 9 of 18) intron (NM_001122594, intron 9 of 18) 42912 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak2_24_12_0.66891412358446_4.03489677993332_0.840839978588874 chr11 78080142 78080363 + 0.840839978588874 NA exon (NM_022313, exon 1 of 10) exon (NM_022313, exon 1 of 10) 131 NM_022313 57837 Mm.21096 NM_022313 ENSMUSG00000020832 Eral1 2610524P08Rik|9130407C09Rik|AU019798|Era|M-ERA|MERA-S|MERA-W Era (G-protein)-like 1 (E. coli) protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-6 chr19 37814264 37814528 + 0.840839978588874 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 116588 NM_007811 13082 Mm.42230 NM_007811 ENSMUSG00000024987 Cyp26a1 Cyp26|P450RA|P450RAI|RAH cytochrome P450, family 26, subfamily a, polypeptide 1 protein-coding common_peak2_24_12_0.66891412358446_4.03489677993332_0.840839978588874-3 chr2 109735063 109735287 + 0.840839978588874 NA Intergenic Intergenic 12254 NM_001285422 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-2 chr10 68319485 68320162 + 0.840839978588874 NA intron (NR_045357, intron 2 of 2) intron (NR_045357, intron 2 of 2) 1319 NR_045357 75148 Mm.23505 NR_045357 ENSMUSG00000112157 4930545H06Rik - RIKEN cDNA 4930545H06 gene ncRNA common_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-3 chr10 43695535 43695858 + 0.840839978588874 NA Intergenic Intergenic -50462 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-9 chr17 6808594 6808874 + 0.840839978588874 NA Intergenic Intergenic -25954 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-20 chr4 81616965 81617298 + 0.840839978588874 NA Intergenic Intergenic -130118 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-5 chr2 26021273 26021553 + 0.840839978588874 NA exon (NM_133835, exon 1 of 10) exon (NM_133835, exon 1 of 10) 347 NM_133835 98766 Mm.247824 NM_133835 ENSMUSG00000036352 Ubac1 1110033G07Rik|AA407978|GBDR1|Gdbr1|Kpc2|Ubadc1 ubiquitin associated domain containing 1 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-13 chr4 132756599 132756974 + 0.840839978588874 NA intron (NM_133888, intron 1 of 7) intron (NM_133888, intron 1 of 7) 385 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-4 chr11 101138606 101138938 + 0.840839978588874 NA Intergenic Intergenic -17112 NM_134028 103768 Mm.142348 NM_134028 ENSMUSG00000045007 Tubg2 AI504772|Tubgl tubulin, gamma 2 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-16 chr8 36719526 36719889 + 0.840839978588874 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 13347 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-19 chr3 121430473 121430821 + 0.840839978588874 NA intron (NM_028044, intron 1 of 6) intron (NM_028044, intron 1 of 6) 4106 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874 chr11 101424468 101424834 + 0.840839978588874 NA promoter-TSS (NM_172566) promoter-TSS (NM_172566) -434 NM_172566 217201 Mm.305941 NM_172566 ENSMUSG00000035007 Rundc1 AW125546|D930024B17 RUN domain containing 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-6 chr13 23544930 23545409 + 0.840839978588874 NA TTS (NM_013548) TTS (NM_013548) 1117 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak2_24_12_0.66891412358446_4.03489677993332_0.840839978588874-6 chr5 104508408 104508618 + 0.840839978588874 NA 5' UTR (NM_001166581, exon 1 of 2) 5' UTR (NM_001166581, exon 1 of 2) 161 NM_001166581 100042165 Mm.482189 NM_001166581 ENSMUSG00000079065 BC005561 - cDNA sequence BC005561 protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-9 chr5 92812701 92812988 + 0.840839978588874 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 3462 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-13 chr4 148517945 148518269 + 0.840839978588874 NA intron (NM_020009, intron 30 of 57) intron (NM_020009, intron 30 of 57) -17645 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-10 chr9 41515614 41515828 + 0.840839978588874 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) -15704 NR_029790 723892 NR_029790 ENSMUSG00000093011 Mir100 Mirn100|mir-100|mmu-mir-100 microRNA 100 ncRNA common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-3 chr11 113731182 113731612 + 0.840839978588874 NA intron (NM_001163346, intron 1 of 1) intron (NM_001163346, intron 1 of 1) 19763 NM_020006 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-5 chr16 34525938 34526371 + 0.840839978588874 NA Intergenic Intergenic -12127 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-10 chr9 71693856 71694201 + 0.840839978588874 NA intron (NM_001304362, intron 8 of 18) intron (NM_001304362, intron 8 of 18) 77574 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-5 chr16 10843854 10844076 + 0.840839978588874 NA TTS (NM_001162932) TTS (NM_001162932) 8906 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-16 chr5 111154751 111155141 + 0.840839978588874 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) 150802 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-6 chr16 30068108 30068475 + 0.840839978588874 NA TTS (NM_008235) TTS (NM_008235) 2934 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-7 chr19 46348687 46348905 + 0.840839978588874 NA non-coding (NR_040418, exon 1 of 1) non-coding (NR_040418, exon 1 of 1) 192 NR_040418 75579 Mm.436708 NR_040418 2310034G01Rik - RIKEN cDNA 2310034G01 gene ncRNA common_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-4 chr17 36836728 36836928 + 0.840839978588874 NA promoter-TSS (NM_001286727) promoter-TSS (NM_001286727) -318 NM_001025599 22670 Mm.34587 NM_030698 ENSMUSG00000024457 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif-containing 26 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-11 chr17 78292878 78293318 + 0.840839978588874 NA intron (NM_015800, intron 4 of 16) intron (NM_015800, intron 4 of 16) 92850 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-15 chr8 25240663 25240901 + 0.840839978588874 NA Intergenic CpG -39240 NM_177089 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-28 chrX 152763862 152764182 + 0.840839978588874 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 5464 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-9 chr2 90489945 90490346 + 0.840839978588874 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -10971 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874 chr12 112591959 112592205 + 0.840839978588874 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 3298 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-6 chr2 118112048 118112252 + 0.840839978588874 NA promoter-TSS (NR_126479) promoter-TSS (NR_126479) 274 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-12 chr4 129068326 129068781 + 0.840839978588874 NA intron (NM_029219, intron 1 of 8) intron (NM_029219, intron 1 of 8) 10282 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-5 chr12 102275609 102276127 + 0.840839978588874 NA Intergenic Intergenic -7206 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-2 chr13 92611649 92612067 + 0.840839978588874 NA intron (NM_172588, intron 1 of 11) intron (NM_172588, intron 1 of 11) 720 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-2 chr14 18271384 18271782 + 0.840839978588874 NA promoter-TSS (NM_025586) promoter-TSS (NM_025586) 447 NM_023526 69721 Mm.25648 NM_023526 ENSMUSG00000021772 Nkiras1 2400004O09Rik|KBRAS1|kappaB-Ras1 NFKB inhibitor interacting Ras-like protein 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-9 chr15 62076710 62077079 + 0.840839978588874 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 37637 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-25 chr8 126867857 126868244 + 0.840839978588874 NA Intergenic Intergenic 19030 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-16 chr19 60895282 60895623 + 0.840839978588874 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 5703 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-10 chr9 75314214 75314555 + 0.840839978588874 NA intron (NM_010313, intron 3 of 12) CpG 316 NM_138719 14697 Mm.17604 NM_010313 ENSMUSG00000032192 Gnb5 GBS|Gbeta5|flr guanine nucleotide binding protein (G protein), beta 5 protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-7 chr4 150856515 150856809 + 0.840839978588874 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 1592 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-9 chr8 122178411 122178671 + 0.840839978588874 NA Intergenic Intergenic -103600 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-5 chr4 8690581 8690892 + 0.840839978588874 NA 5' UTR (NM_001277149, exon 1 of 38) 5' UTR (NM_001277149, exon 1 of 38) 330 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-8 chr2 84557020 84557336 + 0.840839978588874 NA Intergenic Intergenic -50305 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-7 chr18 20459134 20459481 + 0.840839978588874 NA intron (NM_181564, intron 10 of 15) Helitron3Na_Mam|RC|Helitron 23132 NM_181564 16769 Mm.358619 NM_181564 ENSMUSG00000001804 Dsg4 CDHF13|lah desmoglein 4 protein-coding common_peak2_24_12_0.66891412358446_4.03489677993332_0.840839978588874-5 chr3 129969762 129969978 + 0.840839978588874 NA intron (NM_025779, intron 1 of 7) CpG 336 NM_025779 66815 Mm.31056 NM_025779 ENSMUSG00000027994 Mcub 9030408N13Rik|Ccdc109b mitochondrial calcium uniporter dominant negative beta subunit protein-coding common_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874 chr11 17258211 17258652 + 0.840839978588874 NA intron (NM_001330649, intron 1 of 4) intron (NM_001330649, intron 1 of 4) 743 NM_001330649 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-15 chr5 39624157 39624725 + 0.840839978588874 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 20190 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding unique_peak2_14_21_-0.821844093864924_4.04850957170484_0.840839978588874-13 chr9 4376763 4377079 + 0.840839978588874 NA intron (NM_145609, intron 1 of 2) intron (NM_145609, intron 1 of 2) 369 NM_145609 78100 Mm.206549 NM_145609 ENSMUSG00000041124 Msantd4 8430410K20Rik|Mysantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils protein-coding common_peak2_25_12_0.725098456314021_4.0629889462981_0.840839978588874-8 chr5 64280587 64280898 + 0.840839978588874 NA intron (NM_001289514, intron 9 of 18) intron (NM_001289514, intron 9 of 18) 50385 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874 chr1 151063750 151064084 + 0.840839978588874 NA Intergenic Intergenic -70482 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding unique_peak1_25_12_0.725098456314021_4.0629889462981_0.840839978588874-3 chr12 102262270 102262619 + 0.840839978588874 NA intron (NM_172152, intron 14 of 16) intron (NM_172152, intron 14 of 16) -20630 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874-8 chr14 31417490 31418047 + 0.840839978588874 NA promoter-TSS (NM_001347585) promoter-TSS (NM_001347585) -91 NM_001347585 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding common_peak1_24_12_0.66891412358446_4.03489677993332_0.840839978588874 chr1 74053214 74053435 + 0.840839978588874 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 71123 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_13_21_-0.920677545272128_3.99909284600123_0.840839978588874-2 chr1 186579968 186580452 + 0.840839978588874 NA Intergenic PB1D10|SINE|Alu -21529 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_218_209_-0.236049459445986_7.59622078794313_0.840829063499314 chr9 57938526 57941543 + 0.840829063499314 NA promoter-TSS (NM_011352) promoter-TSS (NM_011352) -101 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding unique_peak1_63_38_0.430527866209059_5.50066615196678_0.840390660147383-2 chr14 99547998 99548648 + 0.840390660147383 NA Intergenic Intergenic 249632 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak2_63_38_0.430527866209059_5.50066615196678_0.840390660147383-2 chr18 33794922 33795317 + 0.840390660147383 NA non-coding (NR_038151, exon 1 of 3) non-coding (NR_038151, exon 1 of 3) 227 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_64_38_0.452737874773499_5.511771156249_0.840390660147383 chr15 59481029 59481664 + 0.840390660147383 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) 107148 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak2_45_53_-0.512034200367213_5.49887040197986_0.840390660147383-2 chr11 88173230 88174074 + 0.840390660147383 NA intron (NM_001172099, intron 1 of 9) intron (NM_001172099, intron 1 of 9) 4087 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_45_53_-0.512034200367213_5.49887040197986_0.840390660147383 chr9 66988307 66989028 + 0.840390660147383 NA Intergenic Intergenic -13183 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak2_63_38_0.430527866209059_5.50066615196678_0.840390660147383 chr1 182527453 182527998 + 0.840390660147383 NA Intergenic Intergenic -10115 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_64_38_0.452737874773499_5.511771156249_0.840390660147383-3 chr8 126685241 126685785 + 0.840390660147383 NA Intergenic Intergenic -92077 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_63_38_0.430527866209059_5.50066615196678_0.840390660147383-3 chr15 79439455 79440569 + 0.840390660147383 NA intron (NM_001359863, intron 1 of 10) intron (NM_001359863, intron 1 of 10) 1806 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_63_38_0.430527866209059_5.50066615196678_0.840390660147383-4 chr5 139798165 139798736 + 0.840390660147383 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 6914 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_63_38_0.430527866209059_5.50066615196678_0.840390660147383-3 chr3 88492477 88492960 + 0.840390660147383 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 594 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_45_53_-0.512034200367213_5.49887040197986_0.840390660147383 chr15 75862184 75862892 + 0.840390660147383 NA intron (NM_026960, intron 1 of 10) intron (NM_026960, intron 1 of 10) 199 NM_026960 69146 Mm.27385 NM_026960 ENSMUSG00000022575 Gsdmd 1810036L03Rik|AW558049|DF5L|Dfna5l|Gsdmdc1|M2-4 gasdermin D protein-coding common_peak1_63_38_0.430527866209059_5.50066615196678_0.840390660147383-2 chr12 31266863 31267666 + 0.840390660147383 NA intron (NM_008482, intron 2 of 32) intron (NM_008482, intron 2 of 32) 1970 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak2_45_53_-0.512034200367213_5.49887040197986_0.840390660147383 chr10 24553178 24554158 + 0.840390660147383 NA Intergenic Intergenic -41774 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_63_38_0.430527866209059_5.50066615196678_0.840390660147383 chr11 51832719 51833524 + 0.840390660147383 NA intron (NM_001357588, intron 5 of 12) intron (NM_001357588, intron 5 of 12) 24360 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_64_38_0.452737874773499_5.511771156249_0.840390660147383-2 chr8 124278862 124279426 + 0.840390660147383 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 47750 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_64_38_0.452737874773499_5.511771156249_0.840390660147383 chr5 140515189 140515894 + 0.840390660147383 NA intron (NM_021528, intron 1 of 1) ZP3AR|Satellite|Satellite 9932 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_63_38_0.430527866209059_5.50066615196678_0.840390660147383-5 chr7 70358208 70358800 + 0.840390660147383 NA intron (NM_183261, intron 1 of 2) intron (NM_183261, intron 1 of 2) 2089 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak1_63_38_0.430527866209059_5.50066615196678_0.840390660147383 chr11 103412003 103412723 + 0.840390660147383 NA intron (NM_183034, intron 1 of 11) CpG 301 NM_183034 353047 Mm.18556 NM_183034 ENSMUSG00000034247 Plekhm1 AP162|B2|BC038943|D330036J23Rik pleckstrin homology domain containing, family M (with RUN domain) member 1 protein-coding common_peak1_45_53_-0.512034200367213_5.49887040197986_0.840390660147383-2 chr5 117286928 117287574 + 0.840390660147383 NA intron (NM_018858, intron 1 of 3) intron (NM_018858, intron 1 of 3) 313 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding common_peak1_63_38_0.430527866209059_5.50066615196678_0.840390660147383-4 chr9 63968803 63969429 + 0.840390660147383 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 52943 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_248_236_-0.226639005353131_7.77542374622169_0.8402021031878 chr19 56547592 56549528 + 0.8402021031878 NA promoter-TSS (NM_018831) promoter-TSS (NM_018831) 299 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak1_81_50_0.398534225628943_5.87169245478597_0.839305661805159-4 chr6 24664142 24664864 + 0.839305661805159 NA intron (NM_028459, intron 1 of 10) CpG 492 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding common_peak1_81_50_0.398534225628943_5.87169245478597_0.839305661805159 chr16 23418488 23419298 + 0.839305661805159 NA Intergenic Intergenic -10240 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_81_50_0.398534225628943_5.87169245478597_0.839305661805159 chr15 94543585 94544177 + 0.839305661805159 NA promoter-TSS (NM_172437) promoter-TSS (NM_172437) 221 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding unique_peak1_81_50_0.398534225628943_5.87169245478597_0.839305661805159 chr8 82402786 82403678 + 0.839305661805159 NA promoter-TSS (NM_001254747) promoter-TSS (NM_001254747) -646 NM_008357 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding common_peak1_81_50_0.398534225628943_5.87169245478597_0.839305661805159-2 chr4 132509564 132510433 + 0.839305661805159 NA intron (NM_144907, intron 1 of 9) CpG 458 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak1_81_50_0.398534225628943_5.87169245478597_0.839305661805159-3 chr5 143403844 143404536 + 0.839305661805159 NA intron (NM_025841, intron 1 of 4) CpG 370 NM_025841 66913 Mm.181880 NM_025841 ENSMUSG00000079111 Kdelr2 1110007A14Rik KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein-coding common_peak2_60_67_-0.440306771947463_5.86730945527661_0.839305661805146 chr12 100325990 100326741 + 0.839305661805146 NA intron (NM_001033213, intron 18 of 19) intron (NM_001033213, intron 18 of 19) 49756 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA common_peak1_317_295_-0.196957667278122_8.11097453198989_0.83899883841874 chr3 27651114 27653928 + 0.83899883841874 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 57931 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_443_319_0.168703309677802_8.40627974972626_0.838948486510521 chr3 58414764 58417616 + 0.838948486510521 NA exon (NM_001081229, exon 1 of 4) exon (NM_001081229, exon 1 of 4) 1470 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_110_71_0.334816362269341_6.33733318257698_0.838566397596604 chr8 123518965 123519756 + 0.838566397596604 NA intron (NM_018855, intron 1 of 10) intron (NM_018855, intron 1 of 10) 525 NM_018855 104346 Mm.117265 NM_018855 ENSMUSG00000040220 Gas8 Gas11 growth arrest specific 8 protein-coding common_peak2_110_71_0.334816362269341_6.33733318257698_0.838566397596604 chr18 9957867 9958939 + 0.838566397596604 NA intron (NM_153552, intron 1 of 20) CpG 223 NM_153552 225160 Mm.219648 NM_153552 ENSMUSG00000024287 Thoc1 3110002N20Rik|AW107452|NMP-84 THO complex 1 protein-coding common_peak2_110_71_0.334816362269341_6.33733318257698_0.838566397596604-2 chr5 31193301 31194169 + 0.838566397596604 NA promoter-TSS (NM_001127355) promoter-TSS (NM_001127355) 431 NM_153680 266781 Mm.6118 NM_153680 ENSMUSG00000029146 Snx17 5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064 sorting nexin 17 protein-coding common_peak1_86_91_-0.367813332452292_6.33965528983087_0.838566397596579-2 chr7 79284585 79285445 + 0.838566397596579 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 11749 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_86_91_-0.367813332452292_6.33965528983087_0.838566397596579 chr11 69088204 69089171 + 0.838566397596579 NA intron (NM_009497, intron 1 of 4) CpG 159 NM_009497 22318 Mm.28643 NM_009497 ENSMUSG00000020894 Vamp2 Syb-2|Syb2|Vamp-2|sybII vesicle-associated membrane protein 2 protein-coding common_peak2_86_91_-0.367813332452292_6.33965528983087_0.838566397596579 chr19 44106759 44107488 + 0.838566397596579 NA intron (NM_001162410, intron 1 of 20) CpG 354 NM_007700 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK alpha|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak2_204_197_-0.245795133298537_7.50645905343034_0.838542004577107 chr17 71001303 71002444 + 0.838542004577107 NA intron (NM_026064, intron 1 of 3) CpG 660 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak2_163_161_-0.27594541485743_7.20187729545591_0.838393024992349 chr19 45782571 45783621 + 0.838393024992349 NA non-coding (NR_151594, exon 1 of 15) non-coding (NR_151594, exon 1 of 15) 457 NR_151594 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 Hy5|Ncoat|OGA meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak2_197_134_0.256976030427895_7.20530361226478_0.838393024992349 chr7 143052967 143055207 + 0.838393024992349 NA promoter-TSS (NR_110354) promoter-TSS (NR_110354) -401 NR_110354 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA common_peak1_132_87_0.304335905908736_6.61159957159166_0.838382413282768 chr13 70654570 70655874 + 0.838382413282768 NA Intergenic Intergenic -17588 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_105_109_-0.342644637828044_6.61003739461064_0.838382413282744 chr11 77077719 77078950 + 0.838382413282744 NA promoter-TSS (NR_030756) promoter-TSS (NR_030756) 103 NM_001012309 237859 Mm.156195 NM_001012309 ENSMUSG00000037958 Nsrp1 8030451K07|AI851076|AL022898|Ccdc55|NSpr70|NSrp70 nuclear speckle regulatory protein 1 protein-coding common_peak2_139_139_-0.292036983545651_6.98326452517214_0.838337328846373 chr7 44245867 44247452 + 0.838337328846373 NA promoter-TSS (NM_025880) promoter-TSS (NM_025880) -63 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding common_peak2_169_114_0.269887745999467_6.98043392394411_0.838337328846373 chr1 57405927 57407435 + 0.838337328846373 NA promoter-TSS (NM_001302963) promoter-TSS (NM_001302963) -7 NM_001302963 68736 Mm.288490 NM_001037742 ENSMUSG00000048495 Tyw5 1110034B05Rik tRNA-yW synthesizing protein 5 protein-coding common_peak2_138_139_-0.30230596556188_6.97813003416403_0.838337328846373 chr17 84182139 84183812 + 0.838337328846373 NA TTS (NM_001001806) TTS (NM_001001806) 4972 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_266_251_-0.215192074445777_7.86968388627703_0.837875064588632 chr3 88141776 88144153 + 0.837875064588632 NA intron (NM_001310593, intron 1 of 10) intron (NM_001310593, intron 1 of 10) 592 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak2_53_60_-0.458190486662727_5.70164209423152_0.83767504605574 chr1 88277172 88277529 + 0.83767504605574 NA intron (NM_172505, intron 1 of 4) CpG-383 207 NM_172505 212427 Mm.384762 NM_172505 A730008H23Rik Fleg1 RIKEN cDNA A730008H23 gene protein-coding common_peak2_52_60_-0.484967282293026_5.68825369641637_0.83767504605574 chr17 17830379 17831552 + 0.83767504605574 NA promoter-TSS (NM_001162909) promoter-TSS (NM_001162909) -10 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak2_53_60_-0.458190486662727_5.70164209423152_0.83767504605574-2 chr12 111943870 111944640 + 0.83767504605574 NA non-coding (NR_029464, exon 1 of 3) non-coding (NR_029464, exon 1 of 3) 227 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak1_72_44_0.412562339236252_5.6981342659478_0.83767504605574 chr18 76943706 76944347 + 0.83767504605574 NA promoter-TSS (NM_029826) promoter-TSS (NM_029826) -89 NM_029826 76987 Mm.236127 NM_029826 ENSMUSG00000025421 Hdhd2 0610039H12Rik|3110052N05Rik haloacid dehalogenase-like hydrolase domain containing 2 protein-coding common_peak2_52_60_-0.484967282293026_5.68825369641637_0.83767504605574-3 chr4 109657018 109657758 + 0.83767504605574 NA Intergenic CpG 7984 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_53_60_-0.458190486662727_5.70164209423152_0.83767504605574-3 chr2 32287396 32288027 + 0.83767504605574 NA promoter-TSS (NM_133852) promoter-TSS (NM_133852) 358 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding common_peak1_53_60_-0.458190486662727_5.70164209423152_0.83767504605574 chr1 106401819 106402456 + 0.83767504605574 NA Intergenic Intergenic 144494 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_52_60_-0.484967282293026_5.68825369641637_0.83767504605574-4 chr7 16294866 16295550 + 0.83767504605574 NA Intergenic Intergenic -8413 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding unique_peak1_72_44_0.412562339236252_5.6981342659478_0.83767504605574 chr3 37844973 37845873 + 0.83767504605574 NA Intergenic Intergenic -53390 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_53_60_-0.458190486662727_5.70164209423152_0.83767504605574-2 chr2 29965741 29966324 + 0.83767504605574 NA intron (NM_001177668, intron 1 of 55) CpG 472 NM_001309460 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding common_peak2_53_60_-0.458190486662727_5.70164209423152_0.83767504605574-4 chr2 117950537 117951544 + 0.83767504605574 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 129112 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_53_60_-0.458190486662727_5.70164209423152_0.83767504605574-5 chr5 96803070 96803815 + 0.83767504605574 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 10057 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak2_52_60_-0.484967282293026_5.68825369641637_0.83767504605574-2 chr4 58188347 58189141 + 0.83767504605574 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 17852 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak2_53_60_-0.458190486662727_5.70164209423152_0.83767504605574-6 chrX 12087097 12088283 + 0.83767504605574 NA intron (NM_001168321, intron 1 of 13) CpG -7137 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_52_60_-0.484967282293026_5.68825369641637_0.83767504605574 chr5 103364239 103365094 + 0.83767504605574 NA Intergenic Intergenic 18068 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak2_95_100_-0.361445795453032_6.47748858502528_0.837246886060628 chr8 33385653 33386870 + 0.837246886060628 NA promoter-TSS (NM_001098233) promoter-TSS (NM_001098233) -64 NM_152821 75029 Mm.159402 NM_152821 ENSMUSG00000049184 Purg 4930486B15Rik purine-rich element binding protein G protein-coding common_peak1_121_79_0.31817299484227_6.4810145923085_0.837246886060628 chr8 18726275 18727854 + 0.837246886060628 NA intron (NM_007426, intron 1 of 8) intron (NM_007426, intron 1 of 8) 14498 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_117_119_-0.314544489859084_6.74961835067898_0.836336959074592 chr1 86526784 86527881 + 0.836336959074592 NA intron (NM_008972, intron 1 of 4) CpG-365 775 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_116_119_-0.326736196271741_6.74352249747265_0.836336959074592 chr15 100038638 100039543 + 0.836336959074592 NA intron (NM_001159361, intron 1 of 37) CpG 426 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding common_peak1_116_119_-0.326736196271741_6.74352249747265_0.836336959074592 chr10 78590944 78591914 + 0.836336959074592 NA intron (NM_027875, intron 1 of 7) intron (NM_027875, intron 1 of 7) 535 NM_027875 71709 Mm.86439 NM_027875 ENSMUSG00000032714 Syde1 1200008N06Rik|BB043000|mSYD1A synapse defective 1, Rho GTPase, homolog 1 (C. elegans) protein-coding common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-4 chr18 61398444 61398970 + 0.83607543869935 NA promoter-TSS (NR_029879) promoter-TSS (NR_029879) -807 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935 chr10 39614677 39615482 + 0.83607543869935 NA intron (NM_134000, intron 1 of 8) intron (NM_134000, intron 1 of 8) -1397 NR_152260 100504626 Mm.440236 NR_152259 Gm16364 Gm16365 predicted gene 16364 ncRNA common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-7 chr7 109985698 109986150 + 0.83607543869935 NA intron (NM_153525, intron 1 of 6) intron (NM_153525, intron 1 of 6) 306 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding unique_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935 chr2 30845392 30846195 + 0.83607543869935 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 426 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-2 chr11 78751099 78751884 + 0.83607543869935 NA exon (NM_197989, exon 1 of 1) exon (NM_197989, exon 1 of 1) 238 NM_197989 69109 Mm.341420 NM_197989 ENSMUSG00000049489 Fam58b 1810009O10Rik|Ccnq|Fam58a family with sequence similarity 58, member B protein-coding common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-6 chr7 28179522 28179895 + 0.83607543869935 NA promoter-TSS (NM_001271370) promoter-TSS (NM_001271370) 225 NM_010092 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-5 chr6 146675444 146675886 + 0.83607543869935 NA Intergenic Intergenic 18447 NR_046277 74925 Mm.386304 NR_046277 ENSMUSG00000085238 4930479D17Rik - RIKEN cDNA 4930479D17 gene ncRNA common_peak1_33_41_-0.582486565442309_5.10107414005761_0.83607543869935 chr17 28344895 28345448 + 0.83607543869935 NA intron (NM_011566, intron 1 of 12) intron (NM_011566, intron 1 of 12) 5175 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-3 chr15 10668187 10668817 + 0.83607543869935 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 45038 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_33_41_-0.582486565442309_5.10107414005761_0.83607543869935-8 chr9 21547367 21547926 + 0.83607543869935 NA intron (NM_153141, intron 1 of 14) intron (NM_153141, intron 1 of 14) 752 NM_153141 59035 Mm.178115 NM_021531 ENSMUSG00000032185 Carm1 Prmt4 coactivator-associated arginine methyltransferase 1 protein-coding common_peak1_49_28_0.504317867024737_5.11013992863994_0.836075438699344-4 chr7 105810485 105811010 + 0.836075438699344 NA intron (NM_025301, intron 1 of 2) CpG 340 NM_025301 27397 Mm.44225 NM_025301 ENSMUSG00000030879 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 protein-coding common_peak1_49_28_0.504317867024737_5.11013992863994_0.836075438699344-3 chr4 155668435 155669101 + 0.836075438699344 NA 5' UTR (NM_001256107, exon 1 of 20) 5' UTR (NM_001256107, exon 1 of 20) 486 NM_001256108 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding common_peak2_49_28_0.504317867024737_5.11013992863994_0.836075438699344 chr6 91193477 91193846 + 0.836075438699344 NA Intergenic Intergenic -19103 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_49_28_0.504317867024737_5.11013992863994_0.836075438699344 chr15 75968984 75969589 + 0.836075438699344 NA 5' UTR (NM_001347040, exon 1 of 4) 5' UTR (NM_001347040, exon 1 of 4) 163 NM_001081065 69020 Mm.294295 NM_001081065 ENSMUSG00000034429 Zfp707 1500031N24Rik|AI451708|AW495315 zinc finger protein 707 protein-coding common_peak1_49_28_0.504317867024737_5.11013992863994_0.836075438699344-2 chr3 126830715 126831388 + 0.836075438699344 NA intron (NM_001025438, intron 14 of 18) intron (NM_001025438, intron 14 of 18) 112335 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding common_peak2_101_64_0.361243666962207_6.20298964650956_0.835791152470286 chr7 142083810 142084889 + 0.835791152470286 NA intron (NM_008748, intron 4 of 6) intron (NM_008748, intron 4 of 6) 10935 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak1_100_64_0.347130086228959_6.19593285614293_0.835791152470286 chr10 80265016 80266190 + 0.835791152470286 NA intron (NM_133188, intron 1 of 11) intron (NM_133188, intron 1 of 11) 612 NM_133188 70248 Mm.148693 NM_133188 ENSMUSG00000069565 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 protein-coding common_peak1_101_64_0.361243666962207_6.20298964650956_0.835791152470286 chr8 24572513 24573081 + 0.835791152470286 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 3536 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_100_64_0.347130086228959_6.19593285614293_0.835791152470286-3 chr8 84687372 84688117 + 0.835791152470286 NA 5' UTR (NM_025788, exon 1 of 6) 5' UTR (NM_025788, exon 1 of 6) 118 NM_025788 66830 Mm.289698 NM_025788 ENSMUSG00000001910 Nacc1 2010001H03Rik|4930511N13Rik|Btbd14b|Nac1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing protein-coding common_peak1_100_64_0.347130086228959_6.19593285614293_0.835791152470286-2 chr5 33628835 33629558 + 0.835791152470286 NA intron (NM_001359463, intron 1 of 6) CpG 439 NM_178390 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding common_peak2_77_83_-0.392998625669437_6.19581810994404_0.835791152470286 chr11 59947745 59948814 + 0.835791152470286 NA promoter-TSS (NR_045273) promoter-TSS (NR_045273) 65 NM_138675 192191 Mm.125288 NM_138675 ENSMUSG00000061650 Med9 BC019367|Med25 mediator complex subunit 9 protein-coding common_peak2_39_47_-0.542320537322726_5.31380223205979_0.835790028376013-2 chr10 77605718 77606442 + 0.835790028376013 NA promoter-TSS (NR_125904) promoter-TSS (NR_125904) -17 NM_001301672 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding unique_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-2 chr3 81059059 81059786 + 0.835790028376013 NA intron (NM_019971, intron 1 of 5) G-rich|Low_complexity|Low_complexity 23006 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_39_47_-0.542320537322726_5.31380223205979_0.835790028376013-3 chr19 4756612 4757008 + 0.835790028376013 NA intron (NM_025717, intron 1 of 3) CpG 285 NM_025717 66704 Mm.396734 NM_025717 ENSMUSG00000033760 Rbm4b 4921506I22Rik|AI504630|AI506404|Lark2|Neosin RNA binding motif protein 4B protein-coding common_peak2_56_33_0.462536215522262_5.31873094901147_0.835790028376013-4 chr9 67228607 67229122 + 0.835790028376013 NA intron (NM_001081242, intron 54 of 57) intron (NM_001081242, intron 54 of 57) 7862 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak2_56_33_0.462536215522262_5.31873094901147_0.835790028376013 chr11 118430643 118431322 + 0.835790028376013 NA intron (NM_001204129, intron 1 of 3) intron (NM_001204129, intron 1 of 3) 2525 NM_001204129 56745 Mm.23845 NM_019959 ENSMUSG00000017446 C1qtnf1 1600017K21Rik|CTRP1|Zsig37 C1q and tumor necrosis factor related protein 1 protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-7 chr3 9526264 9527050 + 0.835790028376013 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 83428 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak2_56_33_0.462536215522262_5.31873094901147_0.835790028376013-3 chr4 125123119 125123483 + 0.835790028376013 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 4580 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013 chr12 86872585 86873148 + 0.835790028376013 NA Intergenic Intergenic 11948 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_39_47_-0.542320537322726_5.31380223205979_0.835790028376013 chr10 21790637 21791193 + 0.835790028376013 NA Intergenic Intergenic -91269 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-6 chr2 170129888 170130354 + 0.835790028376013 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 1099 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_56_33_0.462536215522262_5.31873094901147_0.835790028376013-2 chr17 46858234 46858697 + 0.835790028376013 NA Intergenic Intergenic -27052 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Bicral Gltscr1l|mKIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-3 chr17 46858234 46858702 + 0.835790028376013 NA Intergenic Intergenic -27055 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Bicral Gltscr1l|mKIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-5 chr18 38191433 38192542 + 0.835790028376013 NA Intergenic Intergenic 17775 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013 chr17 6079886 6080606 + 0.835790028376013 NA promoter-TSS (NM_177311) promoter-TSS (NM_177311) 325 NM_001357804 66467 Mm.303441 NM_181392 ENSMUSG00000034345 Gtf2h5 2700017P07Rik|2810432H05Rik|D17Wsu155e general transcription factor IIH, polypeptide 5 protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-2 chr14 79481730 79482161 + 0.835790028376013 NA promoter-TSS (NM_018765) promoter-TSS (NM_018765) -677 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-4 chr17 70737009 70737871 + 0.835790028376013 NA intron (NM_001347411, intron 9 of 14) ID_B1|SINE|B4 109337 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_56_33_0.462536215522262_5.31873094901147_0.835790028376013-8 chr8 71668059 71668846 + 0.835790028376013 NA intron (NM_001029873, intron 1 of 41) intron (NM_001029873, intron 1 of 41) 3305 NM_001029873 382018 Mm.334606 NM_001029873 ENSMUSG00000034799 Unc13a 2410078G03Rik|Munc13-1 unc-13 homolog A (C. elegans) protein-coding common_peak1_69_75_-0.403626500471026_6.04611426320807_0.835692031846863 chr3 62506503 62507380 + 0.835692031846863 NA promoter-TSS (NM_028136) promoter-TSS (NM_028136) 47 NM_028136 72162 Mm.224233 NM_028136 ENSMUSG00000027770 Dhx36 2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding common_peak2_68_75_-0.424238609419876_6.03580820873365_0.835692031846863 chr4 117126513 117127379 + 0.835692031846863 NA intron (NM_175030, intron 1 of 3) intron (NM_175030, intron 1 of 3) 133 NM_175030 242646 Mm.358914 NM_175030 ENSMUSG00000047671 Tctex1d4 4833401D15Rik Tctex1 domain containing 4 protein-coding common_peak2_69_75_-0.403626500471026_6.04611426320807_0.835692031846863 chr4 106911700 106912664 + 0.835692031846863 NA intron (NM_198438, intron 1 of 16) CpG 712 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_90_57_0.362161249328427_6.03906161979179_0.835692031846851 chr17 84082344 84083011 + 0.835692031846851 NA intron (NR_045458, intron 2 of 5) intron (NR_045458, intron 2 of 5) 4017 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_90_57_0.362161249328427_6.03906161979179_0.835692031846851-2 chr2 151962992 151964339 + 0.835692031846851 NA Intergenic Intergenic 3952 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak1_91_57_0.377817327095439_6.04688965867529_0.835692031846851 chr17 29614876 29615495 + 0.835692031846851 NA intron (NM_021419, intron 1 of 7) CpG 396 NM_021419 58230 Mm.305994 NM_021419 ENSMUSG00000090083 Rnf8 3830404E21Rik|AIP37|laXp180 ring finger protein 8 protein-coding common_peak2_526_473_-0.152612855373308_8.81243682121161_0.834842016153616 chr8 34807327 34810386 + 0.834842016153616 NA intron (NM_176933, intron 1 of 3) CpG-13950 1246 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_164_162_-0.276115230225927_7.21067053911811_0.834764363386266 chr2 75659245 75660696 + 0.834764363386266 NA intron (NM_146130, intron 1 of 10) CpG 680 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo common_peak1_165_162_-0.267459512913403_7.21499839777438_0.834764363386266 chr2 75659279 75660701 + 0.834764363386266 NA intron (NM_146130, intron 1 of 10) CpG 700 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo common_peak2_178_174_-0.261933539495821_7.32024434208442_0.833721691468211 chr5 142904810 142906601 + 0.833721691468211 NA intron (NM_007393, intron 1 of 5) CpG 1049 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_276_193_0.214847001128788_7.70733634275152_0.833509614800206 chr15 99333229 99335002 + 0.833509614800206 NA intron (NM_001310622, intron 4 of 25) intron (NM_001310622, intron 4 of 25) 30831 NM_001348256 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak2_438_399_-0.169448252569827_8.55913206348981_0.833112899288735 chr19 28289562 28293657 + 0.833112899288735 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -280443 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_106_110_-0.342249829320948_6.62329095168963_0.832931981968743 chr10 117062545 117063798 + 0.832931981968743 NA 5' UTR (NM_001358767, exon 1 of 16) 5' UTR (NM_001358767, exon 1 of 16) 204 NM_001358767 12461 Mm.247788 NM_007636 ENSMUSG00000034024 Cct2 Cctb chaperonin containing Tcp1, subunit 2 (beta) protein-coding common_peak1_134_88_0.309415339114397_6.6304411005236_0.832931981968743 chr11 120230020 120231399 + 0.832931981968743 NA non-coding (NR_151480, exon 2 of 2) non-coding (NR_151480, exon 2 of 2) 908 NR_151480 102640779 Mm.394084 NM_175248 2900052L18Rik - RIKEN cDNA 2900052L18 gene ncRNA common_peak1_134_88_0.309415339114397_6.6304411005236_0.832931981968743-3 chr16 23307901 23309359 + 0.832931981968743 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 18160 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_106_110_-0.342249829320948_6.62329095168963_0.832931981968743-2 chr15 51864553 51865550 + 0.832931981968743 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 410 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_134_88_0.309415339114397_6.6304411005236_0.832931981968743-2 chr13 102905185 102906501 + 0.832931981968743 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 145588 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak1_112_72_0.340498142780234_6.36007363027013_0.831978063576841-4 chr7 128319774 128320513 + 0.831978063576841 NA Intergenic Intergenic -22012 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak1_112_72_0.340498142780234_6.36007363027013_0.831978063576841-3 chr7 27489590 27490568 + 0.831978063576841 NA 3' UTR (NM_018820, exon 2 of 2) 3' UTR (NM_018820, exon 2 of 2) 3126 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak1_112_72_0.340498142780234_6.36007363027013_0.831978063576841 chr12 40222325 40223189 + 0.831978063576841 NA promoter-TSS (NR_035459) promoter-TSS (NR_035459) 54 NR_035459 100316693 NR_035459 ENSMUSG00000089371 Mir1938 mir-1938|mmu-mir-1938 microRNA 1938 ncRNA common_peak1_112_72_0.340498142780234_6.36007363027013_0.831978063576841-2 chr5 20950834 20951800 + 0.831978063576841 NA exon (NM_001080977, exon 1 of 8) exon (NM_001080977, exon 1 of 8) 328 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_87_92_-0.367038388084215_6.35563961706592_0.831978063576816 chr8 111657743 111658727 + 0.831978063576816 NA intron (NM_001358993, intron 1 of 3) intron (NM_001358993, intron 1 of 3) 14792 NM_011742 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak2_87_92_-0.367038388084215_6.35563961706592_0.831978063576816 chr2 180454017 180455107 + 0.831978063576816 NA Intergenic Intergenic -1683 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_158_106_0.278083691522925_6.88050883216261_0.831933789372728 chr1 156558620 156559878 + 0.831933789372728 NA intron (NM_001136104, intron 1 of 12) CpG 462 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding common_peak2_146_97_0.292428921905056_6.76092430506774_0.831384559157665 chr1 135146474 135147798 + 0.831384559157665 NA intron (NM_026823, intron 1 of 6) CpG 302 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding common_peak2_367_262_0.182769373784218_8.13030367618441_0.831316033228735 chr8 92845556 92847325 + 0.831316033228735 NA intron (NM_008610, intron 11 of 12) intron (NM_008610, intron 11 of 12) -8893 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak1_97_101_-0.346122178178685_6.49936425288215_0.831294870924544 chr1 183345071 183346192 + 0.831294870924544 NA intron (NM_177389, intron 6 of 26) intron (NM_177389, intron 6 of 26) 23934 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak2_97_101_-0.346122178178685_6.49936425288215_0.831294870924544 chr17 72918512 72919899 + 0.831294870924544 NA intron (NM_029999, intron 1 of 2) intron (NM_029999, intron 1 of 2) 900 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_122_80_0.311945166943269_6.49582258635626_0.83129487092452 chr12 105684521 105685639 + 0.83129487092452 NA promoter-TSS (NM_178613) promoter-TSS (NM_178613) 161 NM_029654 76559 Mm.114362 NM_029654 ENSMUSG00000041341 Atg2b 2410024A21Rik|AI047755|AI503411|AW558123|C030004M05Rik|C630028L02Rik|mKIAA4067 autophagy related 2B protein-coding common_peak1_123_80_0.323544557094913_6.50162228143208_0.83129487092452 chr17 12991308 12992521 + 0.83129487092452 NA intron (NM_175394, intron 1 of 5) CpG 345 NM_001113533 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding common_peak2_122_80_0.311945166943269_6.49582258635626_0.83129487092452 chr15 83555024 83555756 + 0.83129487092452 NA exon (NM_001030014, exon 1 of 4) exon (NM_001030014, exon 1 of 4) 321 NM_001030014 223722 Mm.37560 NM_001030014 ENSMUSG00000048755 Mcat AI225907|BC025519 malonyl CoA:ACP acyltransferase (mitochondrial) protein-coding common_peak2_199_136_0.250156820045293_7.22311049298317_0.83118444638451 chr15 89179141 89180588 + 0.83118444638451 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 924 NM_001284506 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_166_163_-0.267679632591539_7.22371218832231_0.83118444638451 chr19 37206932 37208332 + 0.83118444638451 NA promoter-TSS (NM_001290828) promoter-TSS (NM_001290828) 87 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding common_peak2_166_163_-0.267679632591539_7.22371218832231_0.83118444638451 chr1 89687133 89689050 + 0.83118444638451 NA intron (NM_001037136, intron 9 of 16) intron (NM_001037136, intron 9 of 16) -4199 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_295_207_0.209356084196616_7.8051177602394_0.83053473785532 chr18 34952747 34955143 + 0.83053473785532 NA intron (NM_010481, intron 1 of 16) intron (NM_010481, intron 1 of 16) 406 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak1_214_147_0.242336104187872_7.33062141772289_0.830404641491735 chr15 99251459 99252982 + 0.830404641491735 NA promoter-TSS (NM_016766) promoter-TSS (NM_016766) -259 NM_016766 51812 Mm.383472 NM_016766 ENSMUSG00000037570 Mcrs1 C78274|ICP22BP|MSP58|P78 microspherule protein 1 protein-coding common_peak2_61_68_-0.438074917225387_5.88948699816548_0.830196118985429 chr1 133609709 133610288 + 0.830196118985429 NA intron (NM_009227, intron 1 of 4) CpG 282 NM_009227 20643 Mm.249110 NM_009227 ENSMUSG00000090553 Snrpe AL022645|C76690|SME small nuclear ribonucleoprotein E protein-coding common_peak2_61_68_-0.438074917225387_5.88948699816548_0.830196118985429-2 chr12 33429580 33430258 + 0.830196118985429 NA intron (NM_172253, intron 1 of 3) CpG 295 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding common_peak2_61_68_-0.438074917225387_5.88948699816548_0.830196118985429-3 chr18 61089959 61091411 + 0.830196118985429 NA Intergenic Intergenic -14887 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_82_51_0.387883902749826_5.894381669516_0.830196118985417 chr19 6941731 6942375 + 0.830196118985417 NA promoter-TSS (NM_001285453) promoter-TSS (NM_001285453) 192 NM_007522 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_172_116_0.27007232028345_7.00540087972513_0.829947819895537 chr2 31759333 31761109 + 0.829947819895537 NA promoter-TSS (NM_001283045) promoter-TSS (NM_001283045) 48 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_65_39_0.438082909937152_5.54096954985594_0.828688081372012 chr8 24364206 24364680 + 0.828688081372012 NA Intergenic Intergenic 74503 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_65_39_0.438082909937152_5.54096954985594_0.828688081372012-2 chr17 34898700 34899547 + 0.828688081372012 NA exon (NM_001286573, exon 1 of 26) exon (NM_001286573, exon 1 of 26) 149 NM_145830 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak2_46_54_-0.507698410222606_5.52751050841336_0.828688081372012-4 chr5 69556816 69557377 + 0.828688081372012 NA exon (NM_172711, exon 1 of 17) exon (NM_172711, exon 1 of 17) 172 NM_001310631 231279 Mm.21105 NM_172711 ENSMUSG00000029208 Guf1 4631409J12|AA407526|EF-4 GUF1 homolog, GTPase protein-coding common_peak2_46_54_-0.507698410222606_5.52751050841336_0.828688081372012 chr10 59909028 59909622 + 0.828688081372012 NA Intergenic Intergenic 29734 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_65_39_0.438082909937152_5.54096954985594_0.828688081372012-3 chr19 5272319 5272959 + 0.828688081372012 NA exon (NM_153129, exon 1 of 24) exon (NM_153129, exon 1 of 24) 480 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak2_46_54_-0.507698410222606_5.52751050841336_0.828688081372012-3 chr19 59589001 59589807 + 0.828688081372012 NA Intergenic Intergenic 96268 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak2_46_54_-0.507698410222606_5.52751050841336_0.828688081372012-2 chr17 83215488 83216479 + 0.828688081372012 NA exon (NM_134117, exon 1 of 7) exon (NM_134117, exon 1 of 7) 700 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding common_peak1_65_39_0.438082909937152_5.54096954985594_0.828688081372012-4 chr7 30551825 30552911 + 0.828688081372012 NA promoter-TSS (NM_183321) promoter-TSS (NM_183321) -96 NM_183321 333193 Mm.34885 NM_183321 ENSMUSG00000036864 Proser3 - proline and serine rich 3 protein-coding common_peak2_65_39_0.438082909937152_5.54096954985594_0.828688081372012-2 chr9 49924437 49924878 + 0.828688081372012 NA Intergenic Intergenic -125264 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_65_39_0.438082909937152_5.54096954985594_0.828688081372012-5 chrX 10718206 10719042 + 0.828688081372012 NA exon (NM_001166635, exon 2 of 2) exon (NM_001166635, exon 2 of 2) 1259 NM_001166635 68041 Mm.29429 NM_026524 ENSMUSG00000008035 Mid1ip1 3110038L01Rik|Mig12|S14R Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) protein-coding common_peak1_65_39_0.438082909937152_5.54096954985594_0.828688081372012 chr13 63187507 63188059 + 0.828688081372012 NA intron (NM_001289926, intron 7 of 15) intron (NM_001289926, intron 7 of 15) -52246 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_78_84_-0.391823269862425_6.21347930120649_0.828573567152013 chr2 94010318 94011163 + 0.828573567152013 NA promoter-TSS (NM_026944) promoter-TSS (NM_026944) -10 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak1_70_76_-0.40216579898817_6.06570364120082_0.827663073743747 chr18 24121101 24122105 + 0.827663073743747 NA intron (NM_172625, intron 1 of 4) CpG 216 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding common_peak2_70_76_-0.40216579898817_6.06570364120082_0.827663073743747-2 chr12 80790611 80791313 + 0.827663073743747 NA intron (NM_001242419, intron 1 of 6) CpG 430 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak2_92_58_0.368642092418395_6.06696409557104_0.827663073743747 chr9 78482033 78482614 + 0.827663073743747 NA promoter-TSS (NM_010106) promoter-TSS (NM_010106) -599 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_70_76_-0.40216579898817_6.06570364120082_0.827663073743747 chr11 49050667 49051529 + 0.827663073743747 NA intron (NM_173434, intron 1 of 2).2 intron (NM_173434, intron 1 of 2).2 144 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_92_58_0.368642092418395_6.06696409557104_0.827663073743747 chr8 107056214 107056650 + 0.827663073743747 NA promoter-TSS (NM_001164472) promoter-TSS (NM_001164472) 305 NM_139229 97484 Mm.288641 NM_139229 ENSMUSG00000031916 Cog8 BB235941|C87832 component of oligomeric golgi complex 8 protein-coding common_peak2_70_76_-0.40216579898817_6.06570364120082_0.827663073743747-3 chrX 19157709 19158642 + 0.827663073743747 NA Intergenic Intergenic -11204 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak1_135_89_0.303867801860289_6.64378699725982_0.827591232380211 chr1 136695014 136696184 + 0.827591232380211 NA promoter-TSS (NR_037986) promoter-TSS (NR_037986) -612 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak1_73_45_0.400343805427185_5.72373385877061_0.827470873527618-4 chr17 37270341 37271441 + 0.827470873527618 NA intron (NM_013819, intron 2 of 7) intron (NM_013819, intron 2 of 7) 657 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding common_peak2_73_45_0.400343805427185_5.72373385877061_0.827470873527618 chr18 34624252 34624786 + 0.827470873527618 NA promoter-TSS (NM_001166406) promoter-TSS (NM_001166406) -105 NM_001166407 19348 Mm.258846 NM_009004 ENSMUSG00000003779 Kif20a AA415432|Rab6kifl kinesin family member 20A protein-coding common_peak1_73_45_0.400343805427185_5.72373385877061_0.827470873527618 chr13 109242628 109243283 + 0.827470873527618 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -81789 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA common_peak1_73_45_0.400343805427185_5.72373385877061_0.827470873527618-3 chr15 85533749 85534305 + 0.827470873527618 NA Intergenic Intergenic -30800 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak2_73_45_0.400343805427185_5.72373385877061_0.827470873527618-2 chr8 14089868 14090301 + 0.827470873527618 NA intron (NM_001034862, intron 1 of 5) intron (NM_001034862, intron 1 of 5) 243 NM_001034862 234086 Mm.268896 NM_001034862 ENSMUSG00000051978 Erich1 - glutamate rich 1 protein-coding common_peak1_73_45_0.400343805427185_5.72373385877061_0.827470873527618-2 chr14 21547269 21548021 + 0.827470873527618 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 47860 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak2_54_61_-0.455364009035936_5.72651430586891_0.827470873527606-2 chr15 36173549 36174464 + 0.827470873527606 NA promoter-TSS (NM_023127) promoter-TSS (NM_023127) -4 NM_023127 17749 Mm.27375 NM_023127 ENSMUSG00000045996 Polr2k ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0 polymerase (RNA) II (DNA directed) polypeptide K protein-coding common_peak1_54_61_-0.455364009035936_5.72651430586891_0.827470873527606 chr9 69886721 69887374 + 0.827470873527606 NA Intergenic Intergenic -102419 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak2_54_61_-0.455364009035936_5.72651430586891_0.827470873527606-3 chr15 53145641 53146285 + 0.827470873527606 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 200220 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_54_61_-0.455364009035936_5.72651430586891_0.827470873527606 chr10 80398519 80399377 + 0.827470873527606 NA intron (NM_001306143, intron 1 of 6) CpG 583 NM_013595 17192 Mm.7142 NM_013595 ENSMUSG00000035478 Mbd3 AI181826|AU019209 methyl-CpG binding domain protein 3 protein-coding common_peak2_54_61_-0.455364009035936_5.72651430586891_0.827470873527606-4 chr16 45379188 45380179 + 0.827470873527606 NA Intergenic Intergenic 29370 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_160_107_0.282569869633671_6.8961724369803_0.827457127464096 chr4 41313634 41314830 + 0.827457127464096 NA intron (NM_026893, intron 1 of 8) intron (NM_026893, intron 1 of 8) 669 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak2_160_107_0.282569869633671_6.8961724369803_0.827457127464096 chr19 43510958 43511960 + 0.827457127464096 NA intron (NM_010324, intron 2 of 8) intron (NM_010324, intron 2 of 8) 13146 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_159_107_0.273644502088474_6.8917097532077_0.827457127464096 chr3 122984726 122986281 + 0.827457127464096 NA Intergenic Intergenic -1056 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak2_160_107_0.282569869633671_6.8961724369803_0.827457127464096-2 chr3 135690099 135691114 + 0.827457127464096 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 941 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_453_327_0.164985325903517_8.44004466756984_0.826550183769823 chr12 86881549 86884776 + 0.826550183769823 NA exon (NM_145836, exon 1 of 1) exon (NM_145836, exon 1 of 1) 1652 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_187_127_0.259551344155566_7.12977567207778_0.826041482256436 chr15 3978556 3980160 + 0.826041482256436 NA exon (NM_134099, exon 1 of 7) exon (NM_134099, exon 1 of 7) 215 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak1_154_153_-0.283735081961485_7.12491899971416_0.826041482256436 chr11 58009207 58010604 + 0.826041482256436 NA intron (NM_028451, intron 1 of 18) CpG 841 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_187_127_0.259551344155566_7.12977567207778_0.826041482256436 chr11 76586454 76588049 + 0.826041482256436 NA Intergenic Intergenic -9512 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_154_153_-0.283735081961485_7.12491899971416_0.826041482256436 chr5 77265520 77266968 + 0.826041482256436 NA intron (NM_011263, intron 1 of 3) CpG 750 NM_011263 19712 Mm.28840 NM_011263 ENSMUSG00000029249 Rest 2610008J04Rik|AA407358|NRSF|REST4 RE1-silencing transcription factor protein-coding common_peak1_142_142_-0.292252783517256_7.01374494501976_0.825850702285926 chr11 52231564 52232951 + 0.825850702285926 NA intron (NM_011543, intron 1 of 5) CpG 262 NM_011543 21402 Mm.42944 NM_011543 ENSMUSG00000036309 Skp1a 15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1 S-phase kinase-associated protein 1A protein-coding common_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123-3 chr6 91473079 91473432 + 0.825714541185123 NA promoter-TSS (NM_028766) promoter-TSS (NM_028766) 168 NM_133928 72170 Mm.41622 NM_133928 ENSMUSG00000034203 Chchd4 2410012P20Rik|2810014D17Rik|AI838740 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding common_peak2_43_24_0.535319212822336_4.91151579618589_0.825714541185123-3 chr7 127708299 127708725 + 0.825714541185123 NA promoter-TSS (NR_030428) promoter-TSS (NR_030428) 25 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123-5 chr9 92538016 92538445 + 0.825714541185123 NA TTS (NR_029474) TTS (NR_029474) -3993 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123-4 chr6 125494081 125494648 + 0.825714541185123 NA intron (NM_007657, intron 1 of 7) CpG 396 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123-2 chr2 150218213 150219048 + 0.825714541185123 NA intron (NM_001142411, intron 1 of 3) intron (NM_001142411, intron 1 of 3) 531 NM_001142411 245174 Mm.378428 NM_001142411 ENSMUSG00000060336 Zfp937 EG245174|Gm4979|ZIPO-I zinc finger protein 937 protein-coding common_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123 chr2 58548395 58548856 + 0.825714541185123 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 12785 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding unique_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123 chr19 29812281 29812992 + 0.825714541185123 NA exon (NM_177721, exon 1 of 1) exon (NM_177721, exon 1 of 1) 338 NM_177721 240614 Mm.125503 NM_177721 ENSMUSG00000074909 Ranbp6 C630001B19 RAN binding protein 6 protein-coding common_peak2_43_24_0.535319212822336_4.91151579618589_0.825714541185123 chr10 93425246 93425724 + 0.825714541185123 NA Intergenic Intergenic -7622 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA common_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123-6 chr9 108341898 108342748 + 0.825714541185123 NA Intergenic Intergenic 3243 NM_001329527 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding unique_peak1_43_24_0.535319212822336_4.91151579618589_0.825714541185123-2 chr8 123514834 123515403 + 0.825714541185123 NA intron (NM_028146, intron 1 of 3) CpG 337 NM_001170975 72185 Mm.27925 NM_028146 ENSMUSG00000031970 Dbndd1 2810427I04Rik|D8Ertd590e dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding common_peak2_43_24_0.535319212822336_4.91151579618589_0.825714541185123-2 chr14 66235486 66235969 + 0.825714541185123 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) -21903 NM_001360233 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-3 chr13 60051106 60051626 + 0.825714541185117 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 21655 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-7 chr4 136139787 136140299 + 0.825714541185117 NA Intergenic Intergenic -3779 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-2 chr11 79306781 79307430 + 0.825714541185117 NA Intergenic Intergenic -32787 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-5 chr2 158167523 158167977 + 0.825714541185117 NA Intergenic Intergenic -21358 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-3 chr18 76241274 76241719 + 0.825714541185117 NA promoter-TSS (NM_010754) promoter-TSS (NM_010754) -205 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding common_peak1_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-5 chr7 84329731 84330109 + 0.825714541185117 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 80118 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-6 chr8 109705647 109705931 + 0.825714541185117 NA promoter-TSS (NM_029468) promoter-TSS (NM_029468) -230 NM_029468 75871 Mm.180410 NM_029468 ENSMUSG00000031728 Zfp821 4930566A11Rik|Znf821 zinc finger protein 821 protein-coding common_peak1_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-2 chr12 84884610 84884952 + 0.825714541185117 NA Intergenic Intergenic -8286 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117 chr1 6278288 6278904 + 0.825714541185117 NA Intergenic Intergenic 63934 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-6 chr3 137292780 137293295 + 0.825714541185117 NA Intergenic Intergenic -48041 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak2_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-4 chr15 100088325 100088898 + 0.825714541185117 NA intron (NR_037311, intron 2 of 3) intron (NR_037311, intron 2 of 3) 49947 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding common_peak1_28_36_-0.62748536467844_4.89571068328973_0.825714541185117 chr11 35769552 35769891 + 0.825714541185117 NA 5' UTR (NM_145962, exon 1 of 7) 5' UTR (NM_145962, exon 1 of 7) 226 NM_145962 211347 Mm.255044 NM_145962 ENSMUSG00000018846 Pank3 - pantothenate kinase 3 protein-coding common_peak1_28_36_-0.62748536467844_4.89571068328973_0.825714541185117-4 chr5 21784836 21785173 + 0.825714541185117 NA promoter-TSS (NM_011188) promoter-TSS (NM_011188) 161 NM_009584 22791 Mm.266312 NM_009584 ENSMUSG00000029014 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ heat shock protein family (Hsp40) member C2 protein-coding common_peak2_88_93_-0.36628162527771_6.37144803903878_0.825549665544934 chr12 110694940 110696281 + 0.825549665544934 NA exon (NM_010480, exon 2 of 11) exon (NM_010480, exon 2 of 11) 785 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak2_88_93_-0.36628162527771_6.37144803903878_0.825549665544934-2 chr13 113045120 113046562 + 0.825549665544934 NA intron (NM_027127, intron 1 of 2) intron (NM_027127, intron 1 of 2) 547 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak2_124_81_0.31734877671486_6.51622639297551_0.825473830390145 chr4 126677202 126678451 + 0.825473830390145 NA exon (NM_011970, exon 1 of 6) exon (NM_011970, exon 1 of 6) 183 NM_011970 26445 Mm.22233 NM_011970 ENSMUSG00000028837 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e|HC7-I proteasome (prosome, macropain) subunit, beta type 2 protein-coding common_peak1_124_81_0.31734877671486_6.51622639297551_0.825473830390145 chr4 149306339 149307616 + 0.825473830390145 NA intron (NM_008441, intron 1 of 20) intron (NM_008441, intron 1 of 20) 721 NM_207682 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak2_247_172_0.221711352769569_7.54548390402151_0.82413864732969 chr15 100227086 100228751 + 0.82413864732969 NA promoter-TSS (NM_007497) promoter-TSS (NM_007497) 59 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding common_peak1_210_202_-0.24044896302654_7.54511143567191_0.824138647329641 chr12 69371490 69373644 + 0.824138647329641 NA 5' UTR (NM_007481, exon 2 of 2) 5' UTR (NM_007481, exon 2 of 2) 417 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_131_132_-0.30232641024992_6.90411923037623_0.823055455996757 chr11 70653288 70654543 + 0.823055455996757 NA intron (NM_011072, intron 1 of 2) CpG 735 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak1_161_108_0.278143148777444_6.90725589916565_0.823055455996732 chr5 38560505 38561550 + 0.823055455996732 NA intron (NM_011715, intron 2 of 14) CpG 568 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak1_18_26_-0.778669068045077_4.36555296814093_0.823046386575433 chr11 75630537 75630764 + 0.823046386575433 NA promoter-TSS (NM_008916) promoter-TSS (NM_008916) -370 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-8 chr9 72274589 72274919 + 0.823046386575433 NA promoter-TSS (NM_001311105) promoter-TSS (NM_001311105) -134 NM_146224 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding unique_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-2 chr16 33399753 33400352 + 0.823046386575433 NA promoter-TSS (NM_001358569) promoter-TSS (NM_001358569) -393 NM_001358569 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding unique_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-5 chr3 117073793 117074200 + 0.823046386575433 NA intron (NR_038029, intron 2 of 8) intron (NR_038029, intron 2 of 8) 3769 NR_038029 433646 Mm.158997 NR_038029 ENSMUSG00000028009 1700061I17Rik - RIKEN cDNA 1700061I17 gene ncRNA unique_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-4 chr3 87763749 87764524 + 0.823046386575433 NA intron (NM_152799, intron 1 of 24) intron (NM_152799, intron 1 of 24) 4817 NM_001289600 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-6 chr7 142455973 142456372 + 0.823046386575433 NA Intergenic Intergenic -4640 NM_001271510 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433 chr1 9638698 9639005 + 0.823046386575433 NA Intergenic Intergenic -7759 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA unique_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-3 chr18 24754778 24755317 + 0.823046386575433 NA intron (NM_001289654, intron 2 of 24) intron (NM_001289654, intron 2 of 24) 46424 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-7 chr8 94784939 94785249 + 0.823046386575433 NA Intergenic Intergenic 12914 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak1_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-2 chr15 11830355 11830783 + 0.823046386575433 NA Intergenic Intergenic 75105 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-3 chr16 24489336 24489807 + 0.823046386575433 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -39743 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-6 chr6 15730087 15730570 + 0.823046386575433 NA intron (NM_175088, intron 2 of 4) intron (NM_175088, intron 2 of 4) 9667 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak1_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-3 chr16 15991095 15991435 + 0.823046386575433 NA intron (NM_001355731, intron 7 of 18) intron (NM_001355731, intron 7 of 18) 103979 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-2 chr15 102065492 102065698 + 0.823046386575433 NA Intergenic Intergenic -8178 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-9 chrX 96125026 96125370 + 0.823046386575433 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 29153 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433 chr1 75214036 75214505 + 0.823046386575433 NA TTS (NM_009447) TTS (NM_009447) 3441 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-5 chr4 101646848 101647091 + 0.823046386575433 NA promoter-TSS (NM_175036) promoter-TSS (NM_175036) -814 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak2_18_26_-0.778669068045077_4.36555296814093_0.823046386575433-4 chr3 93025150 93025591 + 0.823046386575433 NA Intergenic Intergenic -6309 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-7 chr16 87496059 87496430 + 0.82304638657543 NA promoter-TSS (NM_009840) promoter-TSS (NM_009840) 171 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-8 chr2 145656377 145656666 + 0.82304638657543 NA Intergenic Intergenic -44674 NR_033220 408057 Mm.486711 NR_033220 ENSMUSG00000087594 BC039771 - cDNA sequence BC039771 ncRNA unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-4 chr10 128231813 128232025 + 0.82304638657543 NA promoter-TSS (NM_001136082) promoter-TSS (NM_001136082) -144 NM_001164080 21853 Mm.6458 NM_011589 ENSMUSG00000039994 Timeless C77407|Debt69|tim timeless circadian clock 1 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-10 chr6 97211436 97211758 + 0.82304638657543 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 805 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-9 chr9 102747509 102747891 + 0.82304638657543 NA intron (NR_033301, intron 2 of 3) intron (NR_033301, intron 2 of 3) 8052 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-3 chr10 127195850 127196190 + 0.82304638657543 NA promoter-TSS (NM_030714) promoter-TSS (NM_030714) -311 NM_030714 80904 Mm.271724 NM_030714 ENSMUSG00000040415 Dtx3 Deltex3|mg310 deltex 3, E3 ubiquitin ligase protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-6 chr17 26608597 26608983 + 0.82304638657543 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 47278 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-13 chr9 49815555 49815900 + 0.82304638657543 NA Intergenic Intergenic -16334 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-9 chr5 148342153 148342537 + 0.82304638657543 NA intron (NM_007513, intron 6 of 12) intron (NM_007513, intron 6 of 12) 50470 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-3 chr13 45965236 45965521 + 0.82304638657543 NA promoter-TSS (NM_009124) promoter-TSS (NM_009124) -387 NM_009124 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543 chr10 120638127 120638335 + 0.82304638657543 NA Intergenic Intergenic -127501 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-2 chr10 69710400 69710862 + 0.82304638657543 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 176923 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-14 chr8 111742261 111742728 + 0.82304638657543 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 1355 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-6 chr12 12940785 12941251 + 0.82304638657543 NA intron (NM_008709, intron 1 of 2) intron (NM_008709, intron 1 of 2) 818 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543 chr10 19043123 19043700 + 0.82304638657543 NA Intergenic Intergenic -28001 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-2 chr1 36060764 36061252 + 0.82304638657543 NA Intergenic Intergenic -7392 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak2_31_16_0.635522223394212_4.40522395294744_0.82304638657543-3 chr3 69127312 69127523 + 0.82304638657543 NA promoter-TSS (NM_008467) promoter-TSS (NM_008467) -325 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-5 chr12 86879550 86879887 + 0.82304638657543 NA TTS (NM_145836) TTS (NM_145836) 5096 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-7 chr5 105637674 105638029 + 0.82304638657543 NA Intergenic Intergenic -62118 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-13 chr8 25330640 25331025 + 0.82304638657543 NA Intergenic Intergenic -24562 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-2 chr11 18988465 18988898 + 0.82304638657543 NA intron (NM_010789, intron 6 of 11) intron (NM_010789, intron 6 of 11) 30288 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-11 chr8 24975994 24976244 + 0.82304638657543 NA intron (NM_001270996, intron 14 of 21) intron (NM_001270996, intron 14 of 21) -27315 NM_153397 353188 Mm.269223 NM_153397 ENSMUSG00000037437 Adam32 - a disintegrin and metallopeptidase domain 32 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-6 chr2 28524869 28525200 + 0.82304638657543 NA intron (NM_009058, intron 1 of 17) intron (NM_009058, intron 1 of 17) -8430 NM_001145835 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-2 chr11 98963546 98963745 + 0.82304638657543 NA intron (NM_001176528, intron 1 of 7) intron (NM_001176528, intron 1 of 7) -1227 NM_001361954 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-5 chr11 16792676 16793141 + 0.82304638657543 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 40705 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-2 chr10 120722900 120723253 + 0.82304638657543 NA Intergenic Intergenic -42656 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-12 chr8 11458360 11458826 + 0.82304638657543 NA intron (NM_011227, intron 1 of 1) intron (NM_011227, intron 1 of 1) -19336 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-4 chr14 20164488 20165039 + 0.82304638657543 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 17019 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_31_16_0.635522223394212_4.40522395294744_0.82304638657543-2 chr14 52023487 52023734 + 0.82304638657543 NA Intergenic Intergenic -2877 NM_027248 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-5 chr15 102105817 102106139 + 0.82304638657543 NA intron (NM_001355636, intron 3 of 28) intron (NM_001355636, intron 3 of 28) 3044 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-5 chr15 62324915 62325281 + 0.82304638657543 NA Intergenic Intergenic -105647 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-12 chr8 122177897 122178180 + 0.82304638657543 NA Intergenic Intergenic -104103 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-7 chr17 88631418 88631900 + 0.82304638657543 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 5104 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-10 chr4 43577939 43578402 + 0.82304638657543 NA promoter-TSS (NM_172866) promoter-TSS (NM_172866) -565 NM_172866 242406 Mm.259311 NM_172866 ENSMUSG00000028468 Rgp1 1110029E03Rik|AI527196|F730001J03|mKIAA0258 RAB6A GEF compex partner 1 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-3 chr11 96967405 96967913 + 0.82304638657543 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 10029 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-4 chr14 121878705 121878981 + 0.82304638657543 NA promoter-TSS (NR_131000) promoter-TSS (NR_131000) 237 NM_026861 68889 Mm.441151 NM_026861 ENSMUSG00000041765 Ubac2 1190008A14Rik|AW554959|Phgdhl1 ubiquitin associated domain containing 2 protein-coding common_peak2_31_16_0.635522223394212_4.40522395294744_0.82304638657543 chr10 62339673 62339913 + 0.82304638657543 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 628 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-15 chrX 18164067 18164650 + 0.82304638657543 NA intron (NM_001310444, intron 2 of 28) intron (NM_001310444, intron 2 of 28) 1783 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-8 chr15 78984318 78984671 + 0.82304638657543 NA intron (NM_001024716, intron 1 of 13) intron (NM_001024716, intron 1 of 13) 1438 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-7 chr2 59823902 59824267 + 0.82304638657543 NA intron (NM_001290659, intron 18 of 25) intron (NM_001290659, intron 18 of 25) 58522 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-4 chr11 120824759 120825094 + 0.82304638657543 NA promoter-TSS (NM_007988) promoter-TSS (NM_007988) -379 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-11 chr8 11202903 11203429 + 0.82304638657543 NA intron (NM_009931, intron 49 of 51) intron (NM_009931, intron 49 of 51) -109639 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-7 chr15 7865879 7866472 + 0.82304638657543 NA Intergenic Intergenic 50625 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-8 chr18 38015287 38015827 + 0.82304638657543 NA Intergenic Intergenic -16588 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-4 chr13 110910231 110910614 + 0.82304638657543 NA Intergenic Intergenic -6576 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-11 chr6 148895994 148896631 + 0.82304638657543 NA promoter-TSS (NM_001301351) promoter-TSS (NM_001301351) -75 NM_181541 232560 Mm.150568 NM_181541 ENSMUSG00000030309 Caprin2 C1qdc1|Eeg1|rng140 caprin family member 2 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-8 chr5 124112019 124112212 + 0.82304638657543 NA promoter-TSS (NM_025671) promoter-TSS (NM_025671) -206 NM_001361482 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-12 chr9 44343701 44344198 + 0.82304638657543 NA intron (NM_013551, intron 1 of 13) CpG 279 NM_013551 15288 Mm.247676 NM_013551 ENSMUSG00000032126 Hmbs PBGD|T25658|Ups|Uros1 hydroxymethylbilane synthase protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543 chr1 30874097 30874590 + 0.82304638657543 NA Intergenic Intergenic -11087 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-8 chr4 108350143 108350431 + 0.82304638657543 NA Intergenic Intergenic 22135 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-3 chr1 45623400 45623855 + 0.82304638657543 NA Intergenic Intergenic -120345 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-9 chr19 6871732 6872004 + 0.82304638657543 NA Intergenic Intergenic -13657 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543 chr11 69125335 69125577 + 0.82304638657543 NA promoter-TSS (NM_011786) promoter-TSS (NM_011786) -921 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-3 chr14 44183393 44183705 + 0.82304638657543 NA Intergenic Intergenic -12178 NM_029131 74954 Mm.425904 NM_029131 ENSMUSG00000072595 4930503E14Rik - RIKEN cDNA 4930503E14 gene protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-10 chr19 56999185 56999531 + 0.82304638657543 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 9217 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-5 chr14 66801398 66802024 + 0.82304638657543 NA Intergenic Intergenic 66889 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-6 chr17 5439897 5440114 + 0.82304638657543 NA intron (NM_027457, intron 1 of 3) intron (NM_027457, intron 1 of 3) 255 NM_027457 70544 Mm.46654 NM_027457 ENSMUSG00000004945 Tmem242 1110008A10Rik|2310046K16Rik|5730437N04Rik transmembrane protein 242 protein-coding unique_peak1_30_16_0.590041677875687_4.38248368018818_0.82304638657543-6 chr15 53127797 53128323 + 0.82304638657543 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 218123 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_30_16_0.590041677875687_4.38248368018818_0.82304638657543-9 chr3 107776890 107777101 + 0.82304638657543 NA Intergenic Intergenic -16526 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543 chr10 12695144 12695557 + 0.82304638657543 NA intron (NM_011682, intron 24 of 73) intron (NM_011682, intron 24 of 73) 166385 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_31_16_0.635522223394212_4.40522395294744_0.82304638657543-9 chr3 122322729 122323170 + 0.82304638657543 NA Intergenic Intergenic -29246 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak1_57_34_0.4456300044323_5.35209801916112_0.82261631811054-3 chr15 90431637 90432188 + 0.82261631811054 NA Intergenic Intergenic 78202 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA common_peak2_58_34_0.470118068377714_5.36434205113382_0.82261631811054-2 chr14 69732039 69732543 + 0.82261631811054 NA promoter-TSS (NR_130166) promoter-TSS (NR_130166) 279 NM_134078 105513 Mm.159637 NM_134078 ENSMUSG00000034190 Chmp7 4930596K11Rik|6330407G04Rik|AI450338|AW550775 charged multivesicular body protein 7 protein-coding common_peak1_57_34_0.4456300044323_5.35209801916112_0.82261631811054 chr1 71866075 71866973 + 0.82261631811054 NA Intergenic Intergenic -21588 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_58_34_0.470118068377714_5.36434205113382_0.82261631811054 chr1 135021623 135021963 + 0.82261631811054 NA exon (NM_001033409, exon 6 of 18) exon (NM_001033409, exon 6 of 18) 59228 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding common_peak1_58_34_0.470118068377714_5.36434205113382_0.82261631811054-2 chr4 63495494 63495973 + 0.82261631811054 NA 5' UTR (NM_028640, exon 1 of 12) 5' UTR (NM_028640, exon 1 of 12) 258 NM_001008793 73750 Mm.300397 NM_028640 ENSMUSG00000039137 Whrn 1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|Ush2d|wi whirlin protein-coding common_peak2_58_34_0.470118068377714_5.36434205113382_0.82261631811054-4 chr18 52639063 52639541 + 0.82261631811054 NA exon (NM_025749, exon 2 of 2) exon (NM_025749, exon 2 of 2) -6918 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding common_peak2_57_34_0.4456300044323_5.35209801916112_0.82261631811054 chr19 44748255 44748729 + 0.82261631811054 NA Intergenic Intergenic -8902 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_57_34_0.4456300044323_5.35209801916112_0.82261631811054-2 chr6 81731023 81731706 + 0.82261631811054 NA Intergenic Intergenic 164299 NR_106091 102465711 NR_106091 ENSMUSG00000106154 Mir7232 mmu-mir-7232 microRNA 7232 ncRNA common_peak1_57_34_0.4456300044323_5.35209801916112_0.82261631811054-2 chr11 100471929 100472659 + 0.82261631811054 NA exon (NM_172565, exon 1 of 2) exon (NM_172565, exon 1 of 2) 488 NR_155072 217194 Mm.183320 NM_172565 ENSMUSG00000048732 Klhl11 BC011167 kelch-like 11 protein-coding common_peak2_58_34_0.470118068377714_5.36434205113382_0.82261631811054-3 chr15 78802404 78802942 + 0.82261631811054 NA intron (NM_130859, intron 1 of 20) CpG-5060 369 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak2_58_34_0.470118068377714_5.36434205113382_0.82261631811054-5 chr4 59453461 59454071 + 0.82261631811054 NA Intergenic Intergenic -15133 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_58_34_0.470118068377714_5.36434205113382_0.82261631811054 chr11 96311402 96312338 + 0.82261631811054 NA Intergenic Intergenic -4960 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA common_peak2_40_48_-0.536695296941526_5.34636219564445_0.822616318110534-3 chr2 80315693 80316190 + 0.822616318110534 NA intron (NM_024181, intron 1 of 22) CpG 475 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak2_40_48_-0.536695296941526_5.34636219564445_0.822616318110534 chr13 72227470 72228031 + 0.822616318110534 NA Intergenic Intergenic -264027 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak2_40_48_-0.536695296941526_5.34636219564445_0.822616318110534-2 chr2 31256297 31257059 + 0.822616318110534 NA intron (NM_019681, intron 1 of 7) intron (NM_019681, intron 1 of 7) 10755 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak2_40_48_-0.536695296941526_5.34636219564445_0.822616318110534-4 chr3 63928957 63929384 + 0.822616318110534 NA promoter-TSS (NM_001357824) promoter-TSS (NM_001357824) 302 NM_177856 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding common_peak1_40_48_-0.536695296941526_5.34636219564445_0.822616318110534 chr11 54522076 54522657 + 0.822616318110534 NA promoter-TSS (NM_175258) promoter-TSS (NM_175258) -479 NM_001252494 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_40_48_-0.536695296941526_5.34636219564445_0.822616318110534-5 chr5 122263914 122264431 + 0.822616318110534 NA exon (NM_001039153, exon 1 of 14) exon (NM_001039153, exon 1 of 14) 288 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak1_774_681_-0.125029530683365_9.35111316368249_0.822609303070583 chrUn_JH584304 59464 60196 + 0.822609303070583 NA promoter-TSS (NR_003518) promoter-TSS (NR_003518) -141 NR_003518 66776 Mm.247625 NR_003518 Pisd-ps3 4933439C20Rik phosphatidylserine decarboxylase, pseudogene 3 pseudo common_peak2_136_90_0.298420933917083_6.65700510715724_0.822356880169644 chr6 31107015 31107861 + 0.822356880169644 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -44345 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_109_112_-0.328401640637494_6.65597814209644_0.822356880169644-2 chr8 66860260 66861159 + 0.822356880169644 NA exon (NM_001163564, exon 1 of 8) exon (NM_001163564, exon 1 of 8) 492 NM_001163564 234344 Mm.334561 NM_001163564 ENSMUSG00000014907 Naf1 Gm174 nuclear assembly factor 1 ribonucleoprotein protein-coding common_peak2_109_112_-0.328401640637494_6.65597814209644_0.822356880169644 chr5 32459141 32460323 + 0.822356880169644 NA intron (NM_172707, intron 1 of 7) CpG 762 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak2_120_122_-0.314203744362915_6.78541263315778_0.821750160471102 chr13 41643124 41644783 + 0.821750160471102 NA Intergenic Intergenic 37737 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak1_148_99_0.282641206750542_6.78517679315_0.821750160471077-2 chr8 127063800 127065016 + 0.821750160471077 NA exon (NM_001309391, exon 1 of 25) exon (NM_001309391, exon 1 of 25) 352 NM_001309391 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak2_149_99_0.292223295031794_6.78996783729062_0.821750160471077 chr8 94291042 94292473 + 0.821750160471077 NA intron (NM_001357268, intron 3 of 20) intron (NM_001357268, intron 3 of 20) 23151 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_148_99_0.282641206750542_6.78517679315_0.821750160471077 chr1 136344975 136346077 + 0.821750160471077 NA 5' UTR (NM_001347110, exon 1 of 17) 5' UTR (NM_001347110, exon 1 of 17) 578 NM_001347109 67886 Mm.144143 NM_001081360 ENSMUSG00000041570 Camsap2 1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078 calmodulin regulated spectrin-associated protein family, member 2 protein-coding common_peak2_148_99_0.282641206750542_6.78517679315_0.821750160471077 chr19 28622936 28624289 + 0.821750160471077 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -54612 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_103_66_0.345339024850852_6.2387587028832_0.821548731134755 chr9 118040552 118041357 + 0.821548731134755 NA 5' UTR (NM_001048146, exon 1 of 7) 5' UTR (NM_001048146, exon 1 of 7) 432 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_79_85_-0.390677770876912_6.23092586926364_0.821548731134755 chr7 101905922 101906551 + 0.821548731134755 NA intron (NM_025605, intron 1 of 4) CpG 123 NM_001081679 791260 Mm.475469 NM_001081679 ENSMUSG00000078630 Tomt Comt2|F930017I19Rik transmembrane O-methyltransferase protein-coding common_peak1_103_66_0.345339024850852_6.2387587028832_0.821548731134755-2 chrX 96106419 96107618 + 0.821548731134755 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 10973 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_103_66_0.345339024850852_6.2387587028832_0.821548731134755 chr1 91456127 91456938 + 0.821548731134755 NA intron (NM_011066, intron 1 of 22) intron (NM_011066, intron 1 of 22) 2796 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_79_85_-0.390677770876912_6.23092586926364_0.821548731134755 chr5 92809405 92810779 + 0.821548731134755 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 710 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_62_69_-0.435912718698132_5.9113266575959_0.821390792595429 chr16 45093522 45094591 + 0.821390792595429 NA promoter-TSS (NM_026439) promoter-TSS (NM_026439) 45 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_83_52_0.377559261882937_5.91670008550467_0.821390792595417-2 chr16 13588475 13589623 + 0.821390792595417 NA intron (NM_001358453, intron 20 of 22) intron (NM_001358453, intron 20 of 22) -68630 NR_037997 70100 Mm.158330 NR_037997 ENSMUSG00000099411 2310015D24Rik - RIKEN cDNA 2310015D24 gene ncRNA common_peak2_83_52_0.377559261882937_5.91670008550467_0.821390792595417 chr5 103773941 103774634 + 0.821390792595417 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 19714 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_83_52_0.377559261882937_5.91670008550467_0.821390792595417-2 chr7 141168180 141168681 + 0.821390792595417 NA intron (NM_001172100, intron 1 of 9) intron (NM_001172100, intron 1 of 9) 256 NM_001172101 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak1_83_52_0.377559261882937_5.91670008550467_0.821390792595417 chr10 127739608 127740415 + 0.821390792595417 NA intron (NM_198035, intron 1 of 1) CpG 473 NM_198035 320080 Mm.27258 NM_198035 ENSMUSG00000044617 Zbtb39 7030401O21Rik|mKIAA0352 zinc finger and BTB domain containing 39 protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-7 chr2 180025018 180025479 + 0.820829064533854 NA exon (NM_177727, exon 1 of 9) exon (NM_177727, exon 1 of 9) 261 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-2 chr11 55032735 55033389 + 0.820829064533854 NA intron (NR_138556, intron 1 of 24) intron (NR_138556, intron 1 of 24) 409 NR_138556 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-3 chr16 8738715 8739223 + 0.820829064533854 NA promoter-TSS (NM_001003918) promoter-TSS (NM_001003918) -627 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding unique_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854 chr1 118661372 118662047 + 0.820829064533854 NA intron (NM_023755, intron 7 of 14) intron (NM_023755, intron 7 of 14) 33764 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-8 chr4 89294083 89294587 + 0.820829064533854 NA promoter-TSS (NR_132431) promoter-TSS (NR_132431) 284 NM_009877 12578 Mm.4733 NM_009877 ENSMUSG00000044303 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19|p19ARF cyclin dependent kinase inhibitor 2A protein-coding common_peak2_50_29_0.483775863955388_5.14877852758621_0.820829064533854 chr7 4137022 4137261 + 0.820829064533854 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 85 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding common_peak2_50_29_0.483775863955388_5.14877852758621_0.820829064533854-2 chr8 68794075 68794449 + 0.820829064533854 NA intron (NM_001359129, intron 1 of 18) intron (NM_001359129, intron 1 of 18) 333 NM_001293792 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 protein-coding common_peak1_50_29_0.483775863955388_5.14877852758621_0.820829064533854 chr1 105662761 105663529 + 0.820829064533854 NA promoter-TSS (NM_029349) promoter-TSS (NM_029349) 531 NM_013784 27392 Mm.268911 NM_013784 ENSMUSG00000056536 Pign Gm20308|PIG-N phosphatidylinositol glycan anchor biosynthesis, class N protein-coding common_peak1_50_29_0.483775863955388_5.14877852758621_0.820829064533854-3 chr5 21425025 21425585 + 0.820829064533854 NA promoter-TSS (NM_029195) promoter-TSS (NM_029195) 402 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-4 chr15 97906862 97907160 + 0.820829064533854 NA intron (NM_009504, intron 1 of 9) intron (NM_009504, intron 1 of 9) 1285 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding common_peak1_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-2 chr13 32927030 32927433 + 0.820829064533854 NA Intergenic Intergenic -29091 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_50_29_0.483775863955388_5.14877852758621_0.820829064533854-2 chr10 19149441 19149898 + 0.820829064533854 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) 7920 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854 chr1 153572557 153573453 + 0.820829064533854 NA Intergenic Intergenic -23291 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding common_peak1_34_42_-0.574908762156294_5.13881037362395_0.820829064533854 chr11 29840167 29840687 + 0.820829064533854 NA intron (NM_146016, intron 10 of 41) intron (NM_146016, intron 10 of 41) -14759 NM_176829 216622 Mm.443260 NM_176829 ENSMUSG00000078157 4931440F15Rik Fem1ab RIKEN cDNA 4931440F15 gene protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-5 chr19 24994667 24995395 + 0.820829064533854 NA Intergenic Intergenic -4498 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-9 chr8 22506669 22507207 + 0.820829064533854 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -30059 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-3 chr11 70200477 70200932 + 0.820829064533854 NA Intergenic Intergenic -13206 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_34_42_-0.574908762156294_5.13881037362395_0.820829064533854-6 chr2 152414409 152415288 + 0.820829064533854 NA promoter-TSS (NM_001289738) promoter-TSS (NM_001289738) 196 NM_175126 67917 Mm.391810 NM_175126 ENSMUSG00000074682 Zcchc3 2810406K24Rik zinc finger, CCHC domain containing 3 protein-coding unique_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344 chr12 83922241 83922624 + 0.820293215674344 NA promoter-TSS (NR_073563) promoter-TSS (NR_073563) -498 NR_073564 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb NUMB endocytic adaptor protein protein-coding common_peak2_36_20_0.538643318278681_4.6616390819181_0.820293215674344-3 chr12 8380179 8380455 + 0.820293215674344 NA Intergenic Intergenic 66884 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-4 chr14 69614451 69615230 + 0.820293215674344 NA intron (NM_033325, intron 1 of 13) intron (NM_033325, intron 1 of 13) 5364 NM_033325 94352 Mm.116714 NM_033325 ENSMUSG00000034205 Loxl2 1110004B06Rik|4930526G11Rik|9430067E15Rik lysyl oxidase-like 2 protein-coding common_peak2_36_20_0.538643318278681_4.6616390819181_0.820293215674344 chr10 77570625 77571089 + 0.820293215674344 NA Intergenic Intergenic -10798 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding unique_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-2 chr13 30631750 30632463 + 0.820293215674344 NA Intergenic Intergenic 17063 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA unique_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-4 chr17 5799684 5800018 + 0.820293215674344 NA non-coding (NR_045080, exon 1 of 2) non-coding (NR_045080, exon 1 of 2) 361 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA unique_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344 chr1 40271915 40272592 + 0.820293215674344 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 5667 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_36_20_0.538643318278681_4.6616390819181_0.820293215674344-6 chr17 3336608 3336945 + 0.820293215674344 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) 10203 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-6 chr9 14365424 14366116 + 0.820293215674344 NA intron (NM_028013, intron 1 of 1) intron (NM_028013, intron 1 of 1) 15472 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-7 chr9 14632181 14632552 + 0.820293215674344 NA Intergenic Intergenic -17366 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding common_peak2_37_20_0.576846031766387_4.68074043866195_0.820293215674344-2 chr2 58546787 58547211 + 0.820293215674344 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 14411 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak2_37_20_0.576846031766387_4.68074043866195_0.820293215674344-3 chr6 125009824 125010227 + 0.820293215674344 NA promoter-TSS (NM_001347452) promoter-TSS (NM_001347452) 356 NM_175557 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344 chr1 181756388 181756808 + 0.820293215674344 NA Intergenic Intergenic 85803 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-9 chr6 31061427 31061831 + 0.820293215674344 NA Intergenic Intergenic 1118 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-11 chr8 84004289 84004589 + 0.820293215674344 NA intron (NM_183097, intron 5 of 5) intron (NM_183097, intron 5 of 5) -1189 NR_106191 102466886 NR_106191 ENSMUSG00000098823 Mir8111 Gm27823|mmu-mir-8111 microRNA 8111 ncRNA unique_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-2 chr15 36630558 36631128 + 0.820293215674344 NA Intergenic Intergenic -21870 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding unique_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-5 chr8 128445983 128446413 + 0.820293215674344 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 86957 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-4 chr17 35896824 35897240 + 0.820293215674344 NA TTS (NM_001142744) TTS (NM_001142744) 346 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding common_peak2_37_20_0.576846031766387_4.68074043866195_0.820293215674344-5 chr8 124278218 124278556 + 0.820293215674344 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 46993 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_36_20_0.538643318278681_4.6616390819181_0.820293215674344-2 chr10 79841231 79841528 + 0.820293215674344 NA intron (NR_038088, intron 3 of 4) (A)n|Simple_repeat|Simple_repeat -13053 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding unique_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-3 chr15 80138407 80138839 + 0.820293215674344 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 5469 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak2_36_20_0.538643318278681_4.6616390819181_0.820293215674344-5 chr13 102880886 102881210 + 0.820293215674344 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 120793 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-10 chr8 70138819 70139087 + 0.820293215674344 NA promoter-TSS (NM_001309645) promoter-TSS (NM_001309645) 244 NM_011266 19727 Mm.161167 NM_011266 ENSMUSG00000036120 Rfxank Tvl1 regulatory factor X-associated ankyrin-containing protein protein-coding common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-5 chr2 25403198 25403560 + 0.820293215674344 NA intron (NM_008721, intron 1 of 8) CpG 329 NM_008721 18146 Mm.1131 NM_008721 ENSMUSG00000015094 Npdc1 AI314472|NPDC-1 neural proliferation, differentiation and control 1 protein-coding unique_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-3 chr17 13669695 13670345 + 0.820293215674344 NA Intergenic Intergenic -90521 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344 chr10 93213050 93213800 + 0.820293215674344 NA intron (NM_146239, intron 3 of 16) intron (NM_146239, intron 3 of 16) 50640 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-8 chr5 91082628 91083082 + 0.820293215674344 NA intron (NM_007950, intron 1 of 4) intron (NM_007950, intron 1 of 4) 8238 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding common_peak2_36_20_0.538643318278681_4.6616390819181_0.820293215674344-4 chr12 35283501 35283940 + 0.820293215674344 NA Intergenic Intergenic -88823 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_37_20_0.576846031766387_4.68074043866195_0.820293215674344 chr13 15803712 15804047 + 0.820293215674344 NA Intergenic Intergenic -1249 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-5 chr17 28447222 28447772 + 0.820293215674344 NA intron (NM_010220, intron 1 of 10) intron (NM_010220, intron 1 of 10) 38652 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-2 chr14 69467545 69467884 + 0.820293215674344 NA Intergenic Intergenic 44835 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-5 chr15 13173856 13174111 + 0.820293215674344 NA promoter-TSS (NM_007666) promoter-TSS (NM_007666) -308 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_37_20_0.576846031766387_4.68074043866195_0.820293215674344-3 chr15 97705243 97705837 + 0.820293215674344 NA intron (NM_028003, intron 1 of 16) CpG 282 NM_028003 71919 Mm.12255 NM_028003 ENSMUSG00000022466 Rpap3 2310042P20Rik|D15Ertd682e RNA polymerase II associated protein 3 protein-coding common_peak2_37_20_0.576846031766387_4.68074043866195_0.820293215674344-4 chr7 90306211 90306540 + 0.820293215674344 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 4020 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-2 chr10 86166878 86167418 + 0.820293215674344 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 71294 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-3 chr10 93749956 93750472 + 0.820293215674344 NA Intergenic Intergenic -66892 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-6 chr15 85043136 85043526 + 0.820293215674344 NA intron (NM_001356616, intron 1 of 8) intron (NM_001356616, intron 1 of 8) 589 NM_001356616 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding unique_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-4 chr4 126113042 126113578 + 0.820293215674344 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 9353 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_36_20_0.538643318278681_4.6616390819181_0.820293215674344-7 chr3 57651322 57651718 + 0.820293215674344 NA intron (NM_175095, intron 1 of 4) CpG 164 NM_175095 52245 Mm.21901 NM_175095 ENSMUSG00000036513 Commd2 1190017G07Rik|AI047739|D3Ertd176e|HSPC042 COMM domain containing 2 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-8 chr4 134734501 134734843 + 0.820293215674341 NA Intergenic Intergenic -30382 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-7 chr2 117461021 117461348 + 0.820293215674341 NA Intergenic Intergenic -118307 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-3 chr1 153735648 153736138 + 0.820293215674341 NA intron (NR_046171, intron 1 of 2) intron (NR_046171, intron 1 of 2) 1936 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-6 chr16 14163333 14163662 + 0.820293215674341 NA intron (NM_001114085, intron 1 of 8) CpG 222 NM_001114085 67203 Mm.24105 NM_023317 ENSMUSG00000022678 Nde1 2810027M15Rik|AU042936|AW822251|Nude|mNudE nudE neurodevelopment protein 1 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-2 chr1 93825431 93826038 + 0.820293215674341 NA intron (NM_001310767, intron 1 of 9) intron (NM_001310767, intron 1 of 9) 494 NM_001310767 98314 Mm.383401 NM_178882 ENSMUSG00000073609 D2hgdh AA408776|AA408778|AI325464 D-2-hydroxyglutarate dehydrogenase protein-coding unique_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-2 chr3 29976043 29976648 + 0.820293215674341 NA intron (NM_001361034, intron 9 of 16) intron (NM_001361034, intron 9 of 16) 36859 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding common_peak1_23_31_-0.68912435355475_4.65543782322263_0.820293215674341 chr1 88561247 88561751 + 0.820293215674341 NA non-coding (NR_037971, exon 6 of 6) non-coding (NR_037971, exon 6 of 6) 9982 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA unique_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-3 chr5 98943364 98943769 + 0.820293215674341 NA intron (NM_008926, intron 15 of 18) intron (NM_008926, intron 15 of 18) 89151 NM_001310677 110075 Mm.136461 NM_173404 ENSMUSG00000029335 Bmp3 9530029I04Rik bone morphogenetic protein 3 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-5 chr10 126979939 126980370 + 0.820293215674341 NA intron (NM_001113470, intron 1 of 7) CpG 1437 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding unique_peak1_23_31_-0.68912435355475_4.65543782322263_0.820293215674341 chr15 77863245 77863546 + 0.820293215674341 NA Intergenic Intergenic -21220 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341 chr12 105008597 105009064 + 0.820293215674341 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 979 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-3 chr5 139912018 139912355 + 0.820293215674341 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 4243 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-4 chr10 94036112 94036451 + 0.820293215674341 NA promoter-TSS (NM_001304572) promoter-TSS (NM_001304572) 280 NM_053072 13998 Mm.269596 NM_053072 ENSMUSG00000020021 Fgd6 AA123052|Etohd4|ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding common_peak1_23_31_-0.68912435355475_4.65543782322263_0.820293215674341-2 chr2 51140130 51140535 + 0.820293215674341 NA intron (NM_028810, intron 2 of 4) intron (NM_028810, intron 2 of 4) 8779 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak2_23_31_-0.68912435355475_4.65543782322263_0.820293215674341 chr1 74248142 74248427 + 0.820293215674341 NA intron (NM_001357387, intron 4 of 10) intron (NM_001357387, intron 4 of 10) 11767 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_71_77_-0.400745949762788_6.08502924398085_0.819872392783476 chr5 38038658 38039805 + 0.819872392783476 NA promoter-TSS (NM_001289535) promoter-TSS (NM_001289535) 1 NM_026959 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding common_peak2_71_77_-0.400745949762788_6.08502924398085_0.819872392783476-3 chr8 61623576 61623995 + 0.819872392783476 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -32616 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_71_77_-0.400745949762788_6.08502924398085_0.819872392783476 chr1 136229865 136230697 + 0.819872392783476 NA intron (NM_028872, intron 1 of 9) intron (NM_028872, intron 1 of 9) 3999 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding common_peak2_71_77_-0.400745949762788_6.08502924398085_0.819872392783476-2 chr5 108629131 108630135 + 0.819872392783476 NA promoter-TSS (NM_028223) promoter-TSS (NM_028223) 144 NM_001359924 231580 Mm.276647 NM_153569 ENSMUSG00000062234 Gak D130045N16Rik cyclin G associated kinase protein-coding common_peak2_93_59_0.359715728120292_6.08674845966866_0.819872392783464 chr9 51008161 51008974 + 0.819872392783464 NA intron (NM_178710, intron 1 of 15) CpG 506 NM_178710 235344 Mm.104932 NM_178710 ENSMUSG00000037112 Sik2 G630080D20Rik|Snf1lk2 salt inducible kinase 2 protein-coding common_peak2_125_82_0.311275887326667_6.53067737501026_0.819779479040504 chr18 34220539 34221711 + 0.819779479040504 NA 5' UTR (NM_007462, exon 1 of 16) 5' UTR (NM_007462, exon 1 of 16) 141 NM_007462 11789 Mm.384171 NM_007462 ENSMUSG00000005871 Apc AI047805|AU020952|AW124434|CC1|Min|mAPC adenomatosis polyposis coli protein-coding common_peak2_99_103_-0.345195835562028_6.52784180036008_0.81977947904048 chr1 172499965 172500980 + 0.81977947904048 NA intron (NM_178598, intron 1 of 4) CpG 226 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding common_peak2_99_103_-0.345195835562028_6.52784180036008_0.81977947904048-2 chr5 124030960 124032171 + 0.81977947904048 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 695 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_99_103_-0.345195835562028_6.52784180036008_0.81977947904048-3 chr7 6154989 6156200 + 0.81977947904048 NA intron (NM_001013012, intron 1 of 2) CpG 377 NM_001013012 67109 Mm.3254 NM_001013012 ENSMUSG00000046792 Zfp787 2210018M03Rik|Znf787 zinc finger protein 787 protein-coding common_peak2_89_94_-0.365542440477609_6.38708438809214_0.819275435731799-2 chr2 167789488 167790474 + 0.819275435731799 NA Intergenic Intergenic 98804 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_114_74_0.326636530481008_6.39213695573638_0.819275435731799 chr5 90930880 90931928 + 0.819275435731799 NA exon (NM_026788, exon 1 of 8) exon (NM_026788, exon 1 of 8) 208 NM_026788 665563 Mm.153030 NM_026788 ENSMUSG00000029376 Mthfd2l 1110019K23Rik|C630010D07Rik methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like protein-coding common_peak1_89_94_-0.365542440477609_6.38708438809214_0.819275435731799 chr6 91191814 91192849 + 0.819275435731799 NA Intergenic Intergenic -20433 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_114_74_0.326636530481008_6.39213695573638_0.819275435731799 chr8 3417132 3418162 + 0.819275435731799 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 24639 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_89_94_-0.365542440477609_6.38708438809214_0.819275435731799 chr1 37429302 37430532 + 0.819275435731799 NA promoter-TSS (NM_001356528) promoter-TSS (NM_001356528) 186 NM_198006 76178 Mm.28085 NM_198006 ENSMUSG00000026112 Coa5 1700001A24Rik|6330578E17Rik|Pet191 cytochrome C oxidase assembly factor 5 protein-coding common_peak1_89_94_-0.365542440477609_6.38708438809214_0.819275435731799-2 chr7 143739900 143740800 + 0.819275435731799 NA promoter-TSS (NM_001199227) promoter-TSS (NM_001199227) 10 NM_001199227 79196 Mm.21199 NM_024289 ENSMUSG00000037606 Osbpl5 1110006M06Rik|AI462538|ORP5|Obph1|Osbp2 oxysterol binding protein-like 5 protein-coding common_peak2_133_133_-0.291591152390628_6.92029361426246_0.81872690323345-2 chr15 66875581 66877392 + 0.81872690323345 NA Intergenic Intergenic -14907 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_133_133_-0.291591152390628_6.92029361426246_0.81872690323345 chr10 59221092 59222686 + 0.81872690323345 NA promoter-TSS (NM_172939) promoter-TSS (NM_172939) -33 NM_172939 268301 Mm.3036 NM_172939 ENSMUSG00000098188 Sowahc 4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik sosondowah ankyrin repeat domain family member C protein-coding common_peak1_157_155_-0.274889532160216_7.14795745278214_0.818626035874197 chr18 34506197 34507479 + 0.818626035874197 NA promoter-TSS (NM_146084) promoter-TSS (NM_146084) -15 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak2_157_155_-0.274889532160216_7.14795745278214_0.818626035874197 chr10 59897885 59899658 + 0.818626035874197 NA TTS (NM_019965) TTS (NM_019965) 19180 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_338_240_0.1912139880845_8.00849633027221_0.817943620508621 chr7 98359020 98361309 + 0.817943620508621 NA intron (NM_001168540, intron 1 of 2) intron (NM_001168540, intron 1 of 2) 1124 NM_001168540 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding common_peak2_175_119_0.258174847842054_7.03597801952955_0.81784426991178 chr15 85580153 85581626 + 0.81784426991178 NA promoter-TSS (NR_040433) promoter-TSS (NR_040433) -160 NM_001163633 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_176_119_0.26629111236837_7.0400361517927_0.81784426991178 chr8 70629727 70631523 + 0.81784426991178 NA intron (NM_011819, intron 1 of 1) PB1D7|SINE|Alu 1470 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak2_74_46_0.388545612702125_5.7488616580287_0.817648941027521 chr1 6214773 6215356 + 0.817648941027521 NA intron (NM_009826, intron 1 of 23) CpG 402 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_55_62_-0.452635809281237_5.7509620188593_0.817648941027521 chr1 152903540 152904470 + 0.817648941027521 NA Intergenic Intergenic -1359 NM_001005507 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_75_46_0.407519623294265_5.75834866332477_0.817648941027521-2 chr15 100422221 100422957 + 0.817648941027521 NA promoter-TSS (NR_040351) promoter-TSS (NR_040351) 466 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak2_75_46_0.407519623294265_5.75834866332477_0.817648941027521 chr8 78677751 78678683 + 0.817648941027521 NA intron (NM_001009981, intron 6 of 10) intron (NM_001009981, intron 6 of 10) 142935 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_55_62_-0.452635809281237_5.7509620188593_0.817648941027521-2 chr7 130265609 130266230 + 0.817648941027521 NA 5' UTR (NM_001347638, exon 1 of 16) 5' UTR (NM_001347638, exon 1 of 16) 889 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding common_peak1_74_46_0.388545612702125_5.7488616580287_0.817648941027521 chr14 25482994 25484032 + 0.817648941027521 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 24328 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_55_62_-0.452635809281237_5.7509620188593_0.817648941027521 chr15 96461305 96461656 + 0.817648941027521 NA promoter-TSS (NM_028148) promoter-TSS (NM_028148) -637 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_75_46_0.407519623294265_5.75834866332477_0.817648941027521 chr15 62321366 62322193 + 0.817648941027521 NA Intergenic Intergenic -102328 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_74_46_0.388545612702125_5.7488616580287_0.817648941027521-2 chr5 36714125 36714882 + 0.817648941027521 NA Intergenic MIRc|SINE|MIR -18482 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_75_46_0.407519623294265_5.75834866332477_0.817648941027521-3 chr9 44724680 44725557 + 0.817648941027521 NA intron (NM_153537, intron 4 of 21) intron (NM_153537, intron 4 of 21) 10080 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_75_46_0.407519623294265_5.75834866332477_0.817648941027521-4 chr9 95511220 95511845 + 0.817648941027521 NA intron (NM_001357977, intron 1 of 25) CpG 464 NM_001357975 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-33 chr6 53803714 53804022 + 0.817533494790411 NA Intergenic Intergenic 16957 NM_025817 66873 Mm.422727 NM_025817 ENSMUSG00000043496 Tril 1200009O22Rik|AI316813|mKIAA0644 TLR4 interactor with leucine-rich repeats protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-10 chr13 60895563 60895855 + 0.817533494790411 NA 3' UTR (NM_001145801, exon 4 of 4) 3' UTR (NM_001145801, exon 4 of 4) 1738 NM_007797 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-53 chr9 47387587 47387867 + 0.817533494790411 NA Intergenic Intergenic -142443 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-21 chr17 47140267 47140621 + 0.817533494790411 NA promoter-TSS (NM_001097623) promoter-TSS (NM_001097623) -498 NM_001097623 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-4 chr13 70796353 70796567 + 0.817533494790411 NA intron (NM_172053, intron 5 of 22) intron (NM_172053, intron 5 of 22) 45351 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-8 chr11 75966894 75967096 + 0.817533494790411 NA Intergenic CpG -32917 NM_198637 74230 Mm.271247 NM_198637 ENSMUSG00000053783 1700016K19Rik Liat1 RIKEN cDNA 1700016K19 gene protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-33 chr5 64503789 64504012 + 0.817533494790411 NA Intergenic Intergenic 26892 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-47 chr9 41732128 41732543 + 0.817533494790411 NA Intergenic Intergenic 150409 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-9 chr13 46735550 46735821 + 0.817533494790411 NA Intergenic Intergenic -7836 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-21 chr2 93303962 93304222 + 0.817533494790411 NA intron (NM_183180, intron 2 of 9) intron (NM_183180, intron 2 of 9) 30395 NM_183180 241556 Mm.274159 NM_183180 ENSMUSG00000027217 Tspan18 2610042G18Rik|6720430O15|BB226562 tetraspanin 18 protein-coding unique_peak2_16_7_0.816885836909696_3.40844291845485_0.817533494790411 chr11 107577615 107577836 + 0.817533494790411 NA intron (NM_198298, intron 3 of 31) intron (NM_198298, intron 3 of 31) 29765 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-12 chr9 72197976 72198221 + 0.817533494790411 NA Intergenic Intergenic -76790 NM_146224 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-14 chr16 20371675 20372030 + 0.817533494790411 NA intron (NM_013790, intron 17 of 29) intron (NM_013790, intron 17 of 29) -46448 NM_183158 224044 Mm.276400 NM_183158 ENSMUSG00000022818 Cyp2ab1 EG224044|F730023N20 cytochrome P450, family 2, subfamily ab, polypeptide 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-14 chr14 66104154 66104418 + 0.817533494790411 NA intron (NM_007940, intron 5 of 18) intron (NM_007940, intron 5 of 18) 6374 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-41 chr5 136627003 136627220 + 0.817533494790411 NA Intergenic Intergenic -59621 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-9 chr11 79494875 79495095 + 0.817533494790411 NA intron (NM_010897, intron 36 of 57) intron (NM_010897, intron 36 of 57) 9097 NM_019409 18377 Mm.93335 NM_019409 ENSMUSG00000049612 Omg - oligodendrocyte myelin glycoprotein protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-38 chr7 112267724 112268022 + 0.817533494790411 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 42037 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-4 chr10 11282258 11282492 + 0.817533494790411 NA intron (NM_001168297, intron 1 of 2) intron (NM_001168297, intron 1 of 2) 788 NM_001168297 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-4 chr11 16850605 16850822 + 0.817533494790411 NA intron (NM_207655, intron 1 of 27) B3A|SINE|B2 98510 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-32 chr3 137217521 137217891 + 0.817533494790411 NA Intergenic Intergenic -123372 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-58 chrX 152179070 152179369 + 0.817533494790411 NA intron (NM_001005475, intron 1 of 13) intron (NM_001005475, intron 1 of 13) 210 NM_001005475 245666 Mm.33027 NM_001005475 ENSMUSG00000041115 Iqsec2 Brag1 IQ motif and Sec7 domain 2 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-6 chr12 84870889 84871168 + 0.817533494790411 NA intron (NM_013589, intron 1 of 34) intron (NM_013589, intron 1 of 34) -4774 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-7 chr17 56990643 56990869 + 0.817533494790411 NA intron (NM_017393, intron 2 of 5) intron (NM_017393, intron 2 of 5) 492 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-26 chr2 27320732 27320970 + 0.817533494790411 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -73548 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411 chr1 89785472 89785681 + 0.817533494790411 NA intron (NM_178119, intron 12 of 17) intron (NM_178119, intron 12 of 17) -101684 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-17 chr16 86389579 86390102 + 0.817533494790411 NA Intergenic Intergenic 416673 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411 chr10 24579885 24580194 + 0.817533494790411 NA Intergenic B4A|SINE|B4 -15403 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-36 chr6 85450869 85451117 + 0.817533494790411 NA promoter-TSS (NM_007638) promoter-TSS (NM_007638) 309 NM_028505 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-57 chr9 87462992 87463187 + 0.817533494790411 NA Intergenic Intergenic -207557 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-43 chr7 141216949 141217190 + 0.817533494790411 NA exon (NM_025886, exon 3 of 6) exon (NM_025886, exon 3 of 6) 1209 NM_025886 66985 Mm.21202 NM_025886 ENSMUSG00000038618 Rassf7 2400009B11Rik|AW210608 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-7 chr10 128674205 128674473 + 0.817533494790411 NA promoter-TSS (NM_173733) promoter-TSS (NM_173733) -421 NM_173733 211389 Mm.23352 NM_173733 ENSMUSG00000049858 Suox SO sulfite oxidase protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-3 chr13 67500276 67500551 + 0.817533494790411 NA 5' UTR (NM_001007575, exon 1 of 4) 5' UTR (NM_001007575, exon 1 of 4) 109 NM_001007575 238693 Mm.478914 NM_001007575 ENSMUSG00000071291 Zfp58 A530094I17Rik|Mfg-1|Mfg1|Rslcan5|Zfp817 zinc finger protein 58 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-42 chr8 83856202 83856593 + 0.817533494790411 NA Intergenic Intergenic -43701 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-21 chr2 92388935 92389139 + 0.817533494790411 NA exon (NM_001202446, exon 3 of 12) exon (NM_001202446, exon 3 of 12) -1591 NR_105966 102466783 NR_105966 ENSMUSG00000099093 Mir7000 Gm27338|mmu-mir-7000 microRNA 7000 ncRNA unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-18 chr19 40425320 40425659 + 0.817533494790411 NA intron (NM_001034962, intron 1 of 22) intron (NM_001034962, intron 1 of 22) -23179 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-27 chr2 101982466 101982824 + 0.817533494790411 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 96383 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding common_peak2_16_7_0.816885836909696_3.40844291845485_0.817533494790411 chr18 12610685 12610938 + 0.817533494790411 NA Intergenic Intergenic -32722 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-3 chr12 35733375 35733674 + 0.817533494790411 NA Intergenic B3|SINE|B2 -38406 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-48 chr9 44327317 44327724 + 0.817533494790411 NA intron (NM_007875, intron 1 of 8) intron (NM_007875, intron 1 of 8) 675 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-36 chr7 70362066 70362276 + 0.817533494790411 NA intron (NM_183261, intron 1 of 2) intron (NM_183261, intron 1 of 2) -1578 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-6 chr16 86401721 86401920 + 0.817533494790411 NA Intergenic Intergenic 404693 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-24 chr3 34081500 34081704 + 0.817533494790411 NA promoter-TSS (NM_001286972) promoter-TSS (NM_001286972) -248 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-26 chr4 154928297 154928605 + 0.817533494790411 NA promoter-TSS (NM_178931) promoter-TSS (NM_178931) -374 NM_178931 230979 Mm.215147 NM_178931 ENSMUSG00000042333 Tnfrsf14 Atar|HveA|Hvem|Tnfrs14 tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-28 chr4 134663529 134663824 + 0.817533494790411 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 40614 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-49 chr9 119088449 119088664 + 0.817533494790411 NA promoter-TSS (NM_001293648) promoter-TSS (NM_001293648) -295 NM_001293648 18799 Mm.23963 NM_019676 ENSMUSG00000010660 Plcd1 AW212592|C79986 phospholipase C, delta 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-3 chr1 136143080 136143428 + 0.817533494790411 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 11864 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-17 chr16 57698416 57698642 + 0.817533494790411 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 56208 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-15 chr17 35897781 35898057 + 0.817533494790411 NA promoter-TSS (NM_001033630) promoter-TSS (NM_001033630) -541 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-7 chr11 70580244 70580477 + 0.817533494790411 NA intron (NM_016713, intron 1 of 30) intron (NM_016713, intron 1 of 30) 17479 NM_016713 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-40 chr5 91986394 91986604 + 0.817533494790411 NA promoter-TSS (NM_001177577) promoter-TSS (NM_001177577) -974 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-28 chr2 125947438 125947665 + 0.817533494790411 NA intron (NM_175154, intron 8 of 9) intron (NM_175154, intron 8 of 9) 81328 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-3 chr10 93679082 93679391 + 0.817533494790411 NA intron (NR_038017, intron 4 of 5) intron (NR_038017, intron 4 of 5) 4086 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-44 chr7 44918435 44918705 + 0.817533494790411 NA intron (NM_001077264, intron 1 of 22) intron (NM_001077264, intron 1 of 22) 10920 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-12 chr12 70719647 70719872 + 0.817533494790411 NA Intergenic Intergenic -105755 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-10 chr7 98179729 98180003 + 0.817533494790411 NA intron (NR_045971, intron 3 of 3) intron (NR_045971, intron 3 of 3) -1592 NM_007602 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-25 chr4 147897357 147897635 + 0.817533494790411 NA intron (NM_001355590, intron 3 of 18) intron (NM_001355590, intron 3 of 18) 7165 NM_001355590 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-44 chr7 141266169 141266489 + 0.817533494790411 NA promoter-TSS (NM_001252600) promoter-TSS (NM_001252600) 95 NM_001252601 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-2 chr12 3807159 3807368 + 0.817533494790411 NA intron (NM_001271753, intron 1 of 22) intron (NM_001271753, intron 1 of 22) 103 NM_001271753 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-37 chr4 135045409 135045620 + 0.817533494790411 NA Intergenic Intergenic -75131 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-32 chr5 53429774 53430063 + 0.817533494790411 NA Intergenic Intergenic -125861 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-8 chr13 3744405 3744668 + 0.817533494790411 NA Intergenic Intergenic 59782 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-52 chr8 124288910 124289228 + 0.817533494790411 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 57675 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-16 chr18 33337529 33337741 + 0.817533494790411 NA Intergenic Intergenic -123773 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-12 chr14 56575724 56575933 + 0.817533494790411 NA intron (NM_001145978, intron 1 of 34) intron (NM_001145978, intron 1 of 34) 209 NM_001145978 328417 Mm.379357 NM_001145978 ENSMUSG00000054509 Parp4 Adprtl1|C030027K23Rik|E230037B21Rik|Gm743|PARPL|PH5P|VAULT3|VPARP|p193 poly (ADP-ribose) polymerase family, member 4 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-40 chr6 136467872 136468073 + 0.817533494790411 NA Intergenic Intergenic -50879 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-35 chr7 65862471 65862784 + 0.817533494790411 NA intron (NM_011048, intron 1 of 21) CpG 491 NM_011048 18553 Mm.294007 NM_011048 ENSMUSG00000030513 Pcsk6 C86343|Pace4|SPC4|b2b2830Clo proprotein convertase subtilisin/kexin type 6 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-34 chr4 11672357 11672616 + 0.817533494790411 NA Intergenic Intergenic -31961 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-23 chr2 129213116 129213380 + 0.817533494790411 NA Intergenic Intergenic -5721 NR_045838 329513 Mm.473529 NM_177847 ENSMUSG00000056738 A730036I17Rik - RIKEN cDNA A730036I17 gene ncRNA unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-13 chr15 77816555 77816836 + 0.817533494790411 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 25480 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-29 chr4 137503579 137503819 + 0.817533494790411 NA intron (NM_008305, intron 3 of 96) intron (NM_008305, intron 3 of 96) -34587 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-20 chr17 43407374 43407594 + 0.817533494790411 NA intron (NM_001357332, intron 2 of 20) intron (NM_001357332, intron 2 of 20) 18018 NM_001081178 224792 Mm.23478 NM_001081178 ENSMUSG00000056492 Adgrf5 8430401C09Rik|9330185D23|AI528491|Gpr116|mKIAA0758 adhesion G protein-coupled receptor F5 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-15 chr16 34749968 34750278 + 0.817533494790411 NA Intergenic Intergenic -34827 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-27 chr4 56373557 56373781 + 0.817533494790411 NA Intergenic Intergenic 367756 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-8 chr4 99929294 99929546 + 0.817533494790411 NA promoter-TSS (NM_028132) promoter-TSS (NM_028132) -31 NM_028132 72157 Mm.217764 NM_028132 ENSMUSG00000025791 Pgm2 2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1 phosphoglucomutase 2 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-38 chr6 112212818 112213132 + 0.817533494790411 NA TTS (NR_027865) TTS (NR_027865) 2267 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-34 chr5 122821019 122821246 + 0.817533494790411 NA exon (NM_021505, exon 1 of 17) exon (NM_021505, exon 1 of 17) 210 NM_021505 59008 Mm.332667 NM_021505 ENSMUSG00000029472 Anapc5 2510006G12Rik|AA408751|AA536819|AA986414|APC5|Anpc5 anaphase-promoting complex subunit 5 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-45 chrX 103616501 103616719 + 0.817533494790411 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 7144 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-54 chr9 56969831 56970151 + 0.817533494790411 NA intron (NM_178374, intron 3 of 8) intron (NM_178374, intron 3 of 8) 19067 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-49 chr8 13664720 13665027 + 0.817533494790411 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 12714 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-30 chr5 146699465 146699844 + 0.817533494790411 NA Intergenic Intergenic 95302 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-46 chr8 33905851 33906140 + 0.817533494790411 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 23868 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-43 chr6 124806314 124806576 + 0.817533494790411 NA Intergenic Intergenic -2216 NM_001306051 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-4 chr12 84177261 84177557 + 0.817533494790411 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 16606 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-5 chr11 50174895 50175183 + 0.817533494790411 NA intron (NM_026543, intron 1 of 6) intron (NM_026543, intron 1 of 6) 188 NM_026543 68067 Mm.40828 NM_026543 ENSMUSG00000020381 Mrnip 2900016G09Rik|3010026O09Rik|AI851514|AW475975 MRN complex interacting protein protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-26 chr4 35174041 35174279 + 0.817533494790411 NA Intergenic Intergenic -16676 NM_178061 214944 Mm.32968 NM_178061 ENSMUSG00000073910 Mob3b 8430436F23Rik|A430018A01Rik|Mobkl2b MOB kinase activator 3B protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-39 chr6 117840759 117841029 + 0.817533494790411 NA promoter-TSS (NM_001346652) promoter-TSS (NM_001346652) -287 NM_001346649 232337 Mm.290847 NM_177684 ENSMUSG00000059689 Zfp637 AI646709|BC021601|Znf32 zinc finger protein 637 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-15 chr14 70076312 70076638 + 0.817533494790411 NA promoter-TSS (NM_001289925) promoter-TSS (NM_001289925) -970 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-29 chr2 137098623 137098928 + 0.817533494790411 NA intron (NM_013822, intron 5 of 25) intron (NM_013822, intron 5 of 25) 17745 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-20 chr2 37513829 37514063 + 0.817533494790411 NA intron (NM_001033960, intron 13 of 18) intron (NM_001033960, intron 13 of 18) -2680 NM_177383 338346 Mm.445325 NM_177383 ENSMUSG00000053164 Gpr21 C230004C13Rik G protein-coupled receptor 21 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-29 chr5 124236624 124236933 + 0.817533494790411 NA non-coding (NR_045369, exon 6 of 6) non-coding (NR_045369, exon 6 of 6) 7053 NR_045369 75927 Mm.410803 NR_045369 ENSMUSG00000090220 Pitpnm2os1 4930568K20Rik phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 1 ncRNA unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-5 chr11 51935856 51936185 + 0.817533494790411 NA Intergenic Intergenic -31611 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-46 chr7 67283218 67283478 + 0.817533494790411 NA intron (NM_001357325, intron 4 of 11) intron (NM_001357325, intron 4 of 11) 60732 NM_001191051 75099 Mm.121691 NM_175215 ENSMUSG00000043831 Lysmd4 4930506D23Rik LysM, putative peptidoglycan-binding, domain containing 4 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-41 chr8 54450192 54450464 + 0.817533494790411 NA Intergenic Intergenic 79670 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-42 chr7 90084124 90084435 + 0.817533494790411 NA Intergenic Intergenic 45195 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-50 chr8 64617451 64617681 + 0.817533494790411 NA exon (NM_013494, exon 3 of 9) exon (NM_013494, exon 3 of 9) 75543 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-11 chr12 33456320 33456662 + 0.817533494790411 NA Intergenic Intergenic 26867 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-51 chr8 115765001 115765236 + 0.817533494790411 NA Intergenic Intergenic -58224 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_16_7_0.816885836909696_3.40844291845485_0.817533494790411-2 chr19 41672383 41672583 + 0.817533494790411 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 71373 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-8 chr11 89580602 89580831 + 0.817533494790411 NA intron (NM_001327810, intron 2 of 19) intron (NM_001327810, intron 2 of 19) 116220 NM_001327810 382543 Mm.60997 NM_172534 ENSMUSG00000047773 Ankfn1 4932411E22Rik|Gm1175|nmf9 ankyrin-repeat and fibronectin type III domain containing 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-30 chr5 24686011 24686237 + 0.817533494790411 NA intron (NM_001305264, intron 1 of 14) G-rich|Low_complexity|Low_complexity 309 NM_001305264 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-22 chr2 125305620 125305858 + 0.817533494790411 NA intron (NM_007993, intron 64 of 65) intron (NM_007993, intron 64 of 65) 58224 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-19 chr19 41847007 41847259 + 0.817533494790411 NA 3' UTR (NM_177603, exon 1 of 1) 3' UTR (NM_177603, exon 1 of 1) 999 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-7 chr2 117955287 117955555 + 0.817533494790411 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 133493 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-2 chr6 43247947 43248181 + 0.817533494790411 NA Intergenic B4A|SINE|B4 12454 NM_146370 18346 Mm.222840 NM_146370 ENSMUSG00000061210 Olfr47 IB12|MOR261-9|Olfr13 olfactory receptor 47 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-48 chr7 134263184 134263395 + 0.817533494790411 NA Intergenic Intergenic -38192 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-27 chr5 33342016 33342243 + 0.817533494790411 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 6557 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411 chr11 70716165 70716425 + 0.817533494790411 NA intron (NM_153103, intron 16 of 22) intron (NM_153103, intron 16 of 22) 10305 NR_105890 102465557 NR_105890 ENSMUSG00000105932 Mir6925 mmu-mir-6925 microRNA 6925 ncRNA unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-37 chr7 100920010 100920248 + 0.817533494790411 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 12032 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-39 chr5 91037552 91037791 + 0.817533494790411 NA Intergenic Intergenic 10154 NM_053087 71920 Mm.197319 NM_053087 ENSMUSG00000035020 Epgn 2310069M11Rik|epigen epithelial mitogen protein-coding common_peak1_7_14_-1.16979557181748_3.32199280969978_0.817533494790411 chr4 141060171 141060403 + 0.817533494790411 NA intron (NM_001145958, intron 1 of 35) CpG 258 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding unique_peak2_16_7_0.816885836909696_3.40844291845485_0.817533494790411-2 chr2 9468995 9469319 + 0.817533494790411 NA Intergenic Intergenic 279642 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411 chr1 34127957 34128289 + 0.817533494790411 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 10764 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-35 chr4 122838294 122838510 + 0.817533494790411 NA intron (NM_008917, intron 1 of 8) intron (NM_008917, intron 1 of 8) 2175 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-4 chr10 24585426 24585759 + 0.817533494790411 NA Intergenic Intergenic -9850 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-10 chr12 27507003 27507295 + 0.817533494790411 NA Intergenic Intergenic -164431 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-18 chr16 78301236 78301509 + 0.817533494790411 NA promoter-TSS (NM_001276263) promoter-TSS (NM_001276263) -299 NM_009988 13052 Mm.66222 NM_009988 ENSMUSG00000022865 Cxadr 2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR coxsackie virus and adenovirus receptor protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-14 chr15 97768527 97768791 + 0.817533494790411 NA promoter-TSS (NM_144850) promoter-TSS (NM_144850) -993 NM_001357630 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-25 chr3 104670001 104670271 + 0.817533494790411 NA Intergenic Intergenic 31472 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-28 chr5 115530109 115530331 + 0.817533494790411 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 23544 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-32 chr6 50225640 50226061 + 0.817533494790411 NA intron (NM_018769, intron 5 of 9) intron (NM_018769, intron 5 of 9) 35919 NM_018769 54722 Mm.248361 NM_018769 ENSMUSG00000029821 Gsdme 2310037D07Rik|4932441K13Rik|Dfna5|Dfna5h|EG14210|Fin15 gasdermin E protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-36 chr4 127060787 127061021 + 0.817533494790411 NA intron (NM_026670, intron 1 of 7) intron (NM_026670, intron 1 of 7) 250 NM_026670 68310 Mm.273806 NM_026670 ENSMUSG00000043872 Zmym1 5830412B09Rik|AW209050 zinc finger, MYM domain containing 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-45 chr7 66658597 66658825 + 0.817533494790411 NA intron (NM_080443, intron 5 of 5) intron (NM_080443, intron 5 of 5) 30850 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-13 chr15 99410075 99410287 + 0.817533494790411 NA TTS (NM_026669) TTS (NM_026669) 16962 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-13 chr13 34078060 34078311 + 0.817533494790411 NA promoter-TSS (NM_009450) promoter-TSS (NM_009450) -177 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-11 chr15 11587406 11587849 + 0.817533494790411 NA Intergenic Intergenic -187969 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-22 chr18 32249599 32249844 + 0.817533494790411 NA intron (NM_133658, intron 8 of 14) intron (NM_133658, intron 8 of 14) 9390 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-33 chr3 154690662 154690975 + 0.817533494790411 NA Intergenic Intergenic -20315 NM_175176 209601 Mm.331454 NM_175176 ENSMUSG00000078161 Erich3 1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133 glutamate rich 3 protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-6 chr14 20924774 20925279 + 0.817533494790411 NA Intergenic Intergenic -4372 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-3 chr1 161727457 161727649 + 0.817533494790411 NA Intergenic CpG 60942 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-10 chr11 107416483 107416729 + 0.817533494790411 NA intron (NR_153311, intron 1 of 9) intron (NR_153311, intron 1 of 9) 54114 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-37 chr6 91574501 91574781 + 0.817533494790411 NA Intergenic Intergenic 58606 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-47 chr7 109993252 109993495 + 0.817533494790411 NA Intergenic Intergenic -7143 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-23 chr18 60740911 60741138 + 0.817533494790411 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 5722 NM_001348101 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-3 chr6 52191208 52191563 + 0.817533494790411 NA exon (NM_008265, exon 1 of 2) exon (NM_008265, exon 1 of 2) 318 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-6 chr10 93358772 93359151 + 0.817533494790411 NA Intergenic Intergenic 22750 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-18 chr17 78399812 78400093 + 0.817533494790411 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 18200 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-9 chr7 19001308 19001529 + 0.817533494790411 NA 3' UTR (NM_145579, exon 3 of 3) 3' UTR (NM_145579, exon 3 of 3) -2647 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-2 chr10 80674986 80675211 + 0.817533494790411 NA intron (NM_021462, intron 2 of 13) intron (NM_021462, intron 2 of 13) 1195 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-56 chr9 78088582 78088833 + 0.817533494790411 NA intron (NM_001081490, intron 7 of 12) intron (NM_001081490, intron 7 of 12) 19949 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-30 chr3 97299412 97299671 + 0.817533494790411 NA Intergenic Intergenic -72177 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-35 chr6 17522275 17522513 + 0.817533494790411 NA intron (NM_008591, intron 4 of 21) intron (NM_008591, intron 4 of 21) 58437 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-25 chr2 6336519 6336715 + 0.817533494790411 NA intron (NM_001080548, intron 2 of 14) intron (NM_001080548, intron 2 of 14) 13860 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-12 chr15 62042082 62042391 + 0.817533494790411 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 2979 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-16 chr16 45879756 45880085 + 0.817533494790411 NA Intergenic Intergenic -35169 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-45 chr7 144981704 144982006 + 0.817533494790411 NA Intergenic Intergenic -41930 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-44 chrX 56650712 56651048 + 0.817533494790411 NA intron (NM_172780, intron 12 of 15) intron (NM_172780, intron 12 of 15) 41045 NM_172780 236794 Mm.17815 NM_172780 ENSMUSG00000060681 Slc9a6 3732426M05|6430520C02Rik|NHE6|mKIAA0267 solute carrier family 9 (sodium/hydrogen exchanger), member 6 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-43 chr8 109803518 109803833 + 0.817533494790411 NA intron (NM_001301211, intron 2 of 22) intron (NM_001301211, intron 2 of 22) 25092 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-31 chr3 100922638 100922834 + 0.817533494790411 NA 5' UTR (NM_001165953, exon 1 of 7) 5' UTR (NM_001165953, exon 1 of 7) 243 NM_001165953 229644 Mm.189351 NM_194343 ENSMUSG00000033233 Trim45 4921530N01Rik tripartite motif-containing 45 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-31 chr6 34630135 34630465 + 0.817533494790411 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 31796 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-19 chr16 93137270 93137706 + 0.817533494790411 NA Intergenic Intergenic 215701 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-5 chr15 34083972 34084232 + 0.817533494790411 NA intron (NM_001357925, intron 1 of 10) intron (NM_001357925, intron 1 of 10) 1383 NM_001357925 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-23 chr2 131395646 131395891 + 0.817533494790411 NA Intergenic Intergenic -42876 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-24 chr19 41934989 41935192 + 0.817533494790411 NA intron (NM_001360676, intron 2 of 11) intron (NM_001360676, intron 2 of 11) 1645 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-16 chr15 66796132 66796322 + 0.817533494790411 NA intron (NM_001029841, intron 2 of 7) intron (NM_001029841, intron 2 of 7) 35602 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-5 chr12 100775893 100776092 + 0.817533494790411 NA Intergenic Intergenic -3065 NM_001361023 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-19 chr19 5963813 5964056 + 0.817533494790411 NA 5' UTR (NM_008893, exon 1 of 18) 5' UTR (NM_008893, exon 1 of 18) 272 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411 chr5 36135992 36136245 + 0.817533494790411 NA intron (NM_030889, intron 3 of 26) intron (NM_030889, intron 3 of 26) -67903 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-40 chr7 144937287 144937500 + 0.817533494790411 NA exon (NM_007631, exon 3 of 5) exon (NM_007631, exon 3 of 5) 2532 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-9 chrX 12091765 12091985 + 0.817533494790411 NA intron (NM_001168321, intron 1 of 13) CpG -11322 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-41 chr6 137565510 137565802 + 0.817533494790411 NA intron (NM_001271588, intron 1 of 20) intron (NM_001271588, intron 1 of 20) 5353 NM_001271595 13860 Mm.235346 NM_007945 ENSMUSG00000015766 Eps8 AW261790 epidermal growth factor receptor pathway substrate 8 protein-coding common_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-4 chr9 88270068 88270282 + 0.817533494790411 NA Intergenic Intergenic -57434 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-2 chr1 127983657 127983950 + 0.817533494790411 NA intron (NM_001285945, intron 12 of 20) intron (NM_001285945, intron 12 of 20) 115030 NM_178690 226407 Mm.489713 NM_178690 ENSMUSG00000036104 Rab3gap1 1700003B17Rik|4732493F09Rik|AL117896|Rab3gap|p130 RAB3 GTPase activating protein subunit 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-6 chr11 69661748 69662015 + 0.817533494790411 NA intron (NM_011900, intron 1 of 6) ID_B1|SINE|B4 768 NR_125917 24070 Mm.89579 NM_011900 ENSMUSG00000018761 Mpdu1 LEC35|SL15|Supl15h mannose-P-dolichol utilization defect 1 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-9 chr11 119862479 119862719 + 0.817533494790411 NA intron (NM_028898, intron 20 of 33) intron (NM_028898, intron 20 of 33) -19690 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-11 chr8 126854190 126854449 + 0.817533494790411 NA Intergenic Intergenic 5299 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-22 chr2 109703109 109703365 + 0.817533494790411 NA intron (NM_001285417, intron 1 of 1) MIR|SINE|MIR -6146 NM_001285421 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-2 chr10 79823905 79824160 + 0.817533494790411 NA intron (NM_030218, intron 1 of 4) intron (NM_030218, intron 1 of 4) 3011 NM_030218 78906 Mm.33087 NM_030218 ENSMUSG00000035852 Misp 9130017N09Rik mitotic spindle positioning protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-39 chr7 142385422 142385746 + 0.817533494790411 NA exon (NM_009983, exon 2 of 9) exon (NM_009983, exon 2 of 9) 2286 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411 chr1 138623406 138623695 + 0.817533494790411 NA Intergenic Intergenic -3793 NM_001311148 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-31 chr5 43797205 43797498 + 0.817533494790411 NA Intergenic Intergenic -15202 NM_178729 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-42 chr6 17500837 17501098 + 0.817533494790411 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 37010 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-38 chr5 13384323 13384835 + 0.817533494790411 NA Intergenic Intergenic -12205 NM_001243072 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-55 chr9 63960688 63961009 + 0.817533494790411 NA intron (NM_008542, intron 3 of 3) MIR3|SINE|MIR 61211 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-24 chr4 119239568 119239924 + 0.817533494790411 NA non-coding (NR_149723, exon 6 of 16) non-coding (NR_149723, exon 6 of 16) 5917 NM_001042411 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-2 chr1 74285522 74285844 + 0.817533494790411 NA promoter-TSS (NM_001190444) promoter-TSS (NM_001190444) 649 NM_001039509 56695 Mm.384726 NM_019999 ENSMUSG00000026179 Pnkd 2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2 paroxysmal nonkinesiogenic dyskinesia protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-17 chr18 70602199 70602464 + 0.817533494790411 NA intron (NM_010773, intron 3 of 6) intron (NM_010773, intron 3 of 6) 34039 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-11 chr12 104998806 104999055 + 0.817533494790411 NA promoter-TSS (NM_001042699) promoter-TSS (NM_001042699) -253 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-8 chr4 107524159 107524359 + 0.817533494790411 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 89540 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-7 chr12 103992567 103992806 + 0.817533494790411 NA Intergenic Intergenic -2729 NM_001166350 380780 Mm.201338 NM_199314 ENSMUSG00000063232 Serpina11 Gm895 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 protein-coding unique_peak2_8_14_-1.00106938778933_3.40635590171386_0.817533494790411-20 chr2 84626432 84626648 + 0.817533494790411 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 22940 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding unique_peak2_7_14_-1.16979557181748_3.32199280969978_0.817533494790411-34 chr6 95118131 95118341 + 0.817533494790411 NA promoter-TSS (NR_153843) promoter-TSS (NR_153843) 356 NM_001102670 243574 Mm.333275 NM_001008785 ENSMUSG00000030031 Kbtbd8 AU040152|SSEC-51|SSEC51|Takrp|mKIAA1842 kelch repeat and BTB (POZ) domain containing 8 protein-coding unique_peak1_16_7_0.816885836909696_3.40844291845485_0.817533494790411-5 chr10 39416082 39416292 + 0.817533494790411 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 46388 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_48_55_-0.473996778691549_5.57035653271183_0.817484656603571-3 chr2 130875914 130876628 + 0.817484656603571 NA intron (NR_015523, intron 1 of 2) intron (NR_015523, intron 1 of 2) 30125 NR_015523 613258 Mm.271990 NR_015523 A730017L22Rik - RIKEN cDNA A730017L22 gene ncRNA common_peak1_66_40_0.424001013022304_5.56955251112924_0.817484656603571-2 chr1 181143816 181144879 + 0.817484656603571 NA promoter-TSS (NM_026171) promoter-TSS (NM_026171) -143 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding common_peak1_66_40_0.424001013022304_5.56955251112924_0.817484656603571 chr1 64940928 64941888 + 0.817484656603571 NA intron (NM_001039493, intron 1 of 7) MIR3|SINE|MIR 15416 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_47_55_-0.503534255185598_5.5555877944648_0.817484656603571-3 chr13 59646154 59647084 + 0.817484656603571 NA intron (NM_001035122, intron 5 of 9) intron (NM_001035122, intron 5 of 9) 29165 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_47_55_-0.503534255185598_5.5555877944648_0.817484656603571 chr17 23564434 23565005 + 0.817484656603571 NA promoter-TSS (NM_001033496) promoter-TSS (NM_001033496) -493 NM_001033496 449521 Mm.268582 NM_001033496 ENSMUSG00000071256 Zfp213 BC038178|D17Ertd197e zinc finger protein 213 protein-coding common_peak2_48_55_-0.473996778691549_5.57035653271183_0.817484656603571-2 chr10 80161651 80162178 + 0.817484656603571 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -5925 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_47_55_-0.503534255185598_5.5555877944648_0.817484656603571 chr11 93995418 93995817 + 0.817484656603571 NA promoter-TSS (NM_001199203) promoter-TSS (NM_001199203) -474 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak2_66_40_0.424001013022304_5.56955251112924_0.817484656603571 chr12 70476779 70477361 + 0.817484656603571 NA intron (NR_037248, intron 2 of 4) intron (NR_037248, intron 2 of 4) 23916 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak2_47_55_-0.503534255185598_5.5555877944648_0.817484656603571-2 chr11 116099016 116099568 + 0.817484656603571 NA Intergenic Intergenic 10943 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak2_66_40_0.424001013022304_5.56955251112924_0.817484656603571-2 chr2 77279743 77280433 + 0.817484656603571 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 504 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding common_peak1_48_55_-0.473996778691549_5.57035653271183_0.817484656603571 chr8 22536873 22537470 + 0.817484656603571 NA intron (NM_011394, intron 2 of 10) intron (NM_011394, intron 2 of 10) 56642 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_66_40_0.424001013022304_5.56955251112924_0.817484656603571-4 chr5 24751001 24752065 + 0.817484656603571 NA intron (NM_153076, intron 3 of 3) intron (NM_153076, intron 3 of 3) 6310 NM_153076 214301 Mm.63484 NM_153076 ENSMUSG00000038135 Crygn - crystallin, gamma N protein-coding common_peak1_66_40_0.424001013022304_5.56955251112924_0.817484656603571-5 chr8 84969733 84970385 + 0.817484656603571 NA intron (NM_011563, intron 1 of 5) intron (NM_011563, intron 1 of 5) 437 NM_011563 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding common_peak1_66_40_0.424001013022304_5.56955251112924_0.817484656603571-3 chr2 26506525 26507399 + 0.817484656603571 NA Intergenic Intergenic 3035 NR_132655 102639736 NR_132655 Gm35978 - predicted gene, 35978 ncRNA common_peak2_48_55_-0.473996778691549_5.57035653271183_0.817484656603571 chr1 69610639 69611944 + 0.817484656603571 NA intron (NM_011770, intron 3 of 7) intron (NM_011770, intron 3 of 7) 74669 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak1_110_113_-0.328148650453088_6.6688156889382_0.817225771078754 chr3 129830703 129831876 + 0.817225771078754 NA 5' UTR (NM_026578, exon 1 of 7) 5' UTR (NM_026578, exon 1 of 7) 107 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding common_peak1_137_91_0.293071968393452_6.67009794025374_0.817225771078754 chr8 105346779 105347953 + 0.817225771078754 NA promoter-TSS (NM_001081332) promoter-TSS (NM_001081332) 604 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak1_150_100_0.287386421505245_6.80190469350442_0.817063276037886 chr11 32642176 32643347 + 0.817063276037886 NA 5' UTR (NM_001271349, exon 1 of 12) 5' UTR (NM_001271349, exon 1 of 12) 206 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak1_150_100_0.287386421505245_6.80190469350442_0.817063276037886-2 chr15 83432647 83434418 + 0.817063276037886 NA promoter-TSS (NM_011862) promoter-TSS (NM_011862) -682 NM_001159510 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_235_163_0.227739121558107_7.47142156539714_0.816028550745532 chr3 119781771 119783421 + 0.816028550745532 NA intron (NM_001310711, intron 1 of 13) CpG 792 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak1_214_205_-0.234711057366396_7.56914499850002_0.815861670120092 chr8 22476085 22478216 + 0.815861670120092 NA promoter-TSS (NM_001012667) promoter-TSS (NM_001012667) -271 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_158_156_-0.275070070967556_7.15708571340785_0.814996423841183 chr13 42548873 42550733 + 0.814996423841183 NA Intergenic MER103C|DNA|hAT-Charlie -130996 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_104_67_0.337673773949676_6.25629972822518_0.814709005062661 chr10 120716152 120717179 + 0.814709005062661 NA Intergenic Intergenic -49067 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_104_67_0.337673773949676_6.25629972822518_0.814709005062661-2 chr19 21653310 21654676 + 0.814709005062661 NA intron (NM_146096, intron 1 of 3) intron (NM_146096, intron 1 of 3) 684 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding common_peak2_134_134_-0.291666826970037_6.93098218356581_0.814469659314315 chr4 33030654 33031978 + 0.814469659314315 NA promoter-TSS (NR_036602) promoter-TSS (NR_036602) 7 NR_036602 100504166 Mm.426309 NR_036602 ENSMUSG00000085037 4933421O10Rik - RIKEN cDNA 4933421O10 gene ncRNA common_peak1_101_104_-0.330634037675461_6.54892849882839_0.81420771679045 chr7 84529184 84530249 + 0.81420771679045 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 762 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_100_104_-0.344747618408709_6.54187170846177_0.81420771679045-2 chr9 35210659 35211693 + 0.81420771679045 NA promoter-TSS (NM_026130) promoter-TSS (NM_026130) -27 NM_026130 67398 Mm.284688 NM_026130 ENSMUSG00000032042 Srpr 1300011P19Rik|D11Mgi27|Srpra signal recognition particle receptor ('docking protein') protein-coding common_peak2_100_104_-0.344747618408709_6.54187170846177_0.81420771679045 chr8 126616017 126616580 + 0.81420771679045 NA Intergenic Intergenic -22862 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_126_83_0.305322198795155_6.54497852217634_0.814207716790425-2 chr3 108880673 108882052 + 0.814207716790425 NA exon (NM_177091, exon 4 of 13) exon (NM_177091, exon 4 of 13) 8646 NM_177091 320181 Mm.244233 NM_177091 ENSMUSG00000045326 Fndc7 E230011A21Rik fibronectin type III domain containing 7 protein-coding common_peak1_126_83_0.305322198795155_6.54497852217634_0.814207716790425 chr18 60729560 60731222 + 0.814207716790425 NA intron (NM_001348146, intron 1 of 6) PB1|SINE|Alu 2750 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_126_83_0.305322198795155_6.54497852217634_0.814207716790425 chr2 21235561 21236874 + 0.814207716790425 NA Intergenic Intergenic 30493 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak2_172_168_-0.260442396415329_7.27065823807452_0.813982727913717 chr3 37934801 37936316 + 0.813982727913717 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 36745 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_146_145_-0.282685792859753_7.04848166245014_0.813932103151186 chr1 167283393 167285084 + 0.813932103151186 NA intron (NM_030724, intron 1 of 6) CpG 889 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_91_95_-0.349164178498145_6.41038041147208_0.813149881052206 chr1 16656292 16657089 + 0.813149881052206 NA promoter-TSS (NR_037998) promoter-TSS (NR_037998) 175 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak1_91_95_-0.349164178498145_6.41038041147208_0.813149881052206 chr10 80622684 80623785 + 0.813149881052206 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 454 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_115_75_0.319930528360437_6.4078927776238_0.813149881052206 chr1 151346378 151347960 + 0.813149881052206 NA intron (NM_001039511, intron 1 of 7) intron (NM_001039511, intron 1 of 7) 2671 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_115_75_0.319930528360437_6.4078927776238_0.813149881052206-2 chr10 19013707 19015332 + 0.813149881052206 NA intron (NM_009397, intron 1 of 8) intron (NM_009397, intron 1 of 8) 891 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_91_95_-0.349164178498145_6.41038041147208_0.813149881052206-3 chr6 57824139 57825311 + 0.813149881052206 NA intron (NM_146168, intron 1 of 4) CpG 400 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak2_91_95_-0.349164178498145_6.41038041147208_0.813149881052206-2 chr1 78488245 78489360 + 0.813149881052206 NA promoter-TSS (NR_102757) promoter-TSS (NR_102757) 95 NR_102758 23874 Mm.17898 NM_011811 ENSMUSG00000026245 Farsb C76708|Farsa|Farsl|Farslb|Frsb phenylalanyl-tRNA synthetase, beta subunit protein-coding common_peak2_64_70_-0.411607025868935_5.94394360657022_0.812874645127556-2 chr2 26603375 26604284 + 0.812874645127556 NA intron (NM_026212, intron 1 of 5) CpG 588 NM_026212 67512 Mm.24244 NM_026212 ENSMUSG00000026922 Agpat2 2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) protein-coding common_peak1_64_70_-0.411607025868935_5.94394360657022_0.812874645127556 chr15 80485122 80485829 + 0.812874645127556 NA intron (NM_001163189, intron 4 of 5) intron (NM_001163189, intron 4 of 5) -46872 NR_155274 102633578 Mm.397484 NR_155274 ENSMUSG00000115888 Gm31369 - predicted gene, 31369 ncRNA common_peak1_84_53_0.367545274353618_5.93866013934028_0.812874645127556 chr16 31526787 31527958 + 0.812874645127556 NA Intergenic Intergenic -90761 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak1_84_53_0.367545274353618_5.93866013934028_0.812874645127556-3 chr5 93129172 93130059 + 0.812874645127556 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 36199 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_84_53_0.367545274353618_5.93866013934028_0.812874645127556-2 chr16 65561746 65563154 + 0.812874645127556 NA intron (NM_026879, intron 1 of 5) CpG 247 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding common_peak2_84_53_0.367545274353618_5.93866013934028_0.812874645127556 chr11 76406896 76407569 + 0.812874645127556 NA promoter-TSS (NM_023355) promoter-TSS (NM_023355) 89 NM_019818 56322 Mm.18803 NM_019818 ENSMUSG00000020843 Timm22 Tim22 translocase of inner mitochondrial membrane 22 protein-coding common_peak2_64_70_-0.411607025868935_5.94394360657022_0.812874645127556 chr15 98602081 98603195 + 0.812874645127556 NA intron (NM_007405, intron 2 of 21) intron (NM_007405, intron 2 of 21) 4995 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding common_peak1_85_53_0.384300048472721_5.94703752639983_0.812874645127556-2 chr2 35661518 35662676 + 0.812874645127556 NA intron (NM_001290637, intron 3 of 16) CpG-8041 -29897 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak2_63_70_-0.433817034433375_5.93283860228799_0.812874645127556 chr10 75921130 75921623 + 0.812874645127556 NA exon (NM_001161853, exon 1 of 9) exon (NM_001161853, exon 1 of 9) 238 NM_011418 20587 Mm.279751 NM_011418 ENSMUSG00000000902 Smarcb1 AU020204|Baf47|Ini1|SNF5/INI1|Snf5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 protein-coding common_peak1_85_53_0.384300048472721_5.94703752639983_0.812874645127556-3 chr8 126615253 126615736 + 0.812874645127556 NA Intergenic Intergenic -22058 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_85_53_0.384300048472721_5.94703752639983_0.812874645127556 chr16 8737002 8738252 + 0.812874645127556 NA intron (NM_001003918, intron 1 of 30) intron (NM_001003918, intron 1 of 30) 715 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak2_151_101_0.282628153427163_6.81373941868508_0.812460157167289 chr4 59580190 59581411 + 0.812460157167289 NA promoter-TSS (NM_024255) promoter-TSS (NM_024255) -763 NM_001301367 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding common_peak2_123_124_-0.302389724682549_6.81458942232081_0.812460157167264 chr19 53943289 53944515 + 0.812460157167264 NA promoter-TSS (NM_001355242) promoter-TSS (NM_001355242) -404 NM_001168505 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak2_123_124_-0.302389724682549_6.81458942232081_0.812460157167264-2 chr9 50616655 50617568 + 0.812460157167264 NA promoter-TSS (NM_028300) promoter-TSS (NM_028300) -210 NM_028300 72614 Mm.147232 NM_028300 ENSMUSG00000000167 Pih1d2 2700059L22Rik PIH1 domain containing 2 protein-coding common_peak2_94_60_0.351028036162894_6.10625135564433_0.812309506798835 chr6 38433924 38434713 + 0.812309506798835 NA exon (NM_177185, exon 1 of 17) exon (NM_177185, exon 1 of 17) 393 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding unique_peak1_94_60_0.351028036162894_6.10625135564433_0.812309506798835 chr17 79338078 79339629 + 0.812309506798835 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 16238 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_94_60_0.351028036162894_6.10625135564433_0.812309506798835 chr13 117024193 117025247 + 0.812309506798835 NA intron (NM_001081009, intron 2 of 26) CpG 796 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak2_72_78_-0.399365312611176_6.10409809187152_0.812309506798822 chr8 35919488 35920397 + 0.812309506798822 NA Intergenic Intergenic -36985 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_112_114_-0.315167349284123_6.68790637630231_0.81219487454745 chr8 54548707 54549850 + 0.81219487454745 NA Intergenic Intergenic -1053 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_173_169_-0.260697292106224_7.27904229008459_0.810675641920572 chr13 34651136 34652618 + 0.810675641920572 NA intron (NM_025831, intron 1 of 4) intron (NM_025831, intron 1 of 4) 804 NM_025831 66895 Mm.28943 NM_025831 ENSMUSG00000021411 Pxdc1 1300014I06Rik PX domain containing 1 protein-coding common_peak2_254_177_0.220479968204899_7.58597341506885_0.810487829122627 chr11 69879455 69881045 + 0.810487829122627 NA 5' UTR (NM_153143, exon 1 of 1) 5' UTR (NM_153143, exon 1 of 1) 735 NM_153143 216858 Mm.239498 NM_153143 ENSMUSG00000046731 Kctd11 AF465352|Ren potassium channel tetramerisation domain containing 11 protein-coding common_peak2_355_327_-0.183354737364644_8.26587463593576_0.810380307946427 chr1 135764594 135767787 + 0.810380307946427 NA 5' UTR (NM_013750, exon 1 of 2) 5' UTR (NM_013750, exon 1 of 2) 105 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak2_164_111_0.265258001947546_6.93998392303138_0.810281973716988 chr9 44725988 44727385 + 0.810281973716988 NA intron (NM_153537, intron 3 of 21) intron (NM_153537, intron 3 of 21) 8512 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_42_49_-0.497613659565292_5.39504935999208_0.810079075897175-3 chr4 155237960 155238761 + 0.810079075897175 NA Intergenic Intergenic -11606 NM_001190445 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak1_41_49_-0.531321493755344_5.37819544289705_0.810079075897175-2 chr2 117801812 117802733 + 0.810079075897175 NA Intergenic Intergenic 10530 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_42_49_-0.497613659565292_5.39504935999208_0.810079075897175-4 chr7 46710068 46710639 + 0.810079075897175 NA intron (NM_030233, intron 1 of 11) CpG 298 NM_030233 78935 Mm.289866 NM_030233 ENSMUSG00000006763 Saal1 5031425D22Rik|SPACIA1 serum amyloid A-like 1 protein-coding common_peak1_42_49_-0.497613659565292_5.39504935999208_0.810079075897175 chr1 135411295 135411687 + 0.810079075897175 NA intron (NM_001357578, intron 5 of 24) intron (NM_001357578, intron 5 of 24) 19000 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding common_peak2_41_49_-0.531321493755344_5.37819544289705_0.810079075897175-3 chr7 16207140 16207593 + 0.810079075897175 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 14627 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_42_49_-0.497613659565292_5.39504935999208_0.810079075897175-3 chr5 77356206 77357032 + 0.810079075897175 NA intron (NM_008048, intron 1 of 4) MER58B|DNA|hAT-Charlie 46135 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak2_42_49_-0.497613659565292_5.39504935999208_0.810079075897175 chr11 87448355 87448654 + 0.810079075897175 NA intron (NM_001199293, intron 2 of 30) CpG 20913 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_41_49_-0.531321493755344_5.37819544289705_0.810079075897175 chr1 16688049 16689065 + 0.810079075897175 NA exon (NM_016923, exon 1 of 5) exon (NM_016923, exon 1 of 5) 101 NM_001159711 17087 Mm.116844 NM_016923 ENSMUSG00000025779 Ly96 ESOP-1|MD-2|MD2 lymphocyte antigen 96 protein-coding common_peak1_41_49_-0.531321493755344_5.37819544289705_0.810079075897175 chr2 60704890 60705651 + 0.810079075897175 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 17333 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_41_49_-0.531321493755344_5.37819544289705_0.810079075897175-2 chr11 101120299 101120907 + 0.810079075897175 NA promoter-TSS (NM_001361583) promoter-TSS (NM_001361583) 472 NM_134024 103733 Mm.479145 NM_134024 ENSMUSG00000035198 Tubg1 1500010O08Rik|AI451582|AI503389|Tubg tubulin, gamma 1 protein-coding common_peak2_41_49_-0.531321493755344_5.37819544289705_0.810079075897175-4 chr9 100605111 100605882 + 0.810079075897175 NA Intergenic B3|SINE|B2 -34411 NM_001101483 245020 Mm.236289 NM_001101483 ENSMUSG00000070287 Slc35g2 Gm519|Tmem22 solute carrier family 35, member G2 protein-coding common_peak2_42_49_-0.497613659565292_5.39504935999208_0.810079075897175-2 chr17 34187608 34188486 + 0.810079075897175 NA promoter-TSS (NM_013585) promoter-TSS (NM_013585) 491 NM_013683 21354 Mm.482076 NM_013683 ENSMUSG00000037321 Tap1 ABC17|APT1|Abcb2|Ham-1|Ham1|MTP1|PSF1|RING4|TAP|Tap-1|Y3 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak1_42_49_-0.497613659565292_5.39504935999208_0.810079075897175-2 chr2 37442738 37443231 + 0.810079075897175 NA promoter-TSS (NM_146121) promoter-TSS (NM_146121) 137 NM_199025 320633 Mm.383299 NM_199025 ENSMUSG00000050714 Zbtb26 A630026F21Rik zinc finger and BTB domain containing 26 protein-coding common_peak1_59_35_0.453552564183573_5.3967012835341_0.810079075897168-2 chr2 25223829 25224641 + 0.810079075897168 NA intron (NM_146116, intron 1 of 3) CpG-7809 467 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak1_59_35_0.453552564183573_5.3967012835341_0.810079075897168-5 chr9 45845927 45846400 + 0.810079075897168 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 7618 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak2_59_35_0.453552564183573_5.3967012835341_0.810079075897168-4 chrX 142835581 142836152 + 0.810079075897168 NA 3' UTR (NM_001199360, exon 7 of 7) 3' UTR (NM_001199360, exon 7 of 7) 96866 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA common_peak1_59_35_0.453552564183573_5.3967012835341_0.810079075897168-4 chr7 100930241 100930795 + 0.810079075897168 NA exon (NM_001081116, exon 1 of 21) exon (NM_001081116, exon 1 of 21) 1643 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_59_35_0.453552564183573_5.3967012835341_0.810079075897168 chr18 26368208 26368740 + 0.810079075897168 NA Intergenic Intergenic -614317 NM_001362334 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding common_peak2_59_35_0.453552564183573_5.3967012835341_0.810079075897168-2 chr4 63495450 63495936 + 0.810079075897168 NA 5' UTR (NM_028640, exon 1 of 12) 5' UTR (NM_028640, exon 1 of 12) 298 NM_001008793 73750 Mm.300397 NM_028640 ENSMUSG00000039137 Whrn 1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|Ush2d|wi whirlin protein-coding common_peak2_59_35_0.453552564183573_5.3967012835341_0.810079075897168 chr2 137705005 137705749 + 0.810079075897168 NA Intergenic Intergenic -551207 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_59_35_0.453552564183573_5.3967012835341_0.810079075897168-3 chr5 31527111 31527696 + 0.810079075897168 NA promoter-TSS (NM_028150) promoter-TSS (NM_028150) 408 NM_001359156 20534 Mm.352407 NM_009206 ENSMUSG00000029141 Slc4a1ap kanadaptin solute carrier family 4 (anion exchanger), member 1, adaptor protein protein-coding common_peak2_59_35_0.453552564183573_5.3967012835341_0.810079075897168-3 chr5 134932323 134932755 + 0.810079075897168 NA promoter-TSS (NM_001359537) promoter-TSS (NM_001359537) 15 NM_001359537 79565 Mm.34235 NM_024479 ENSMUSG00000040557 Mettl27 AW492986|BC002286|Wbscr27 methyltransferase like 27 protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-3 chr14 11555411 11555755 + 0.809260849721102 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 2030 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-16 chr7 66569887 66570182 + 0.809260849721102 NA Intergenic Intergenic 119527 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-14 chr8 18619464 18619790 + 0.809260849721102 NA intron (NM_173189, intron 3 of 13) intron (NM_173189, intron 3 of 13) 24496 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-10 chr19 34256355 34256813 + 0.809260849721102 NA Intergenic Intergenic -1211 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102 chr1 40847752 40848109 + 0.809260849721102 NA intron (NM_001081198, intron 4 of 4) intron (NM_001081198, intron 4 of 4) 42329 NM_001081198 381339 Mm.334678 NM_001081198 ENSMUSG00000079588 Tmem182 2310079P10Rik|AI414494 transmembrane protein 182 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-9 chr16 34690510 34690876 + 0.809260849721102 NA promoter-TSS (NM_172824) promoter-TSS (NM_172824) 77 NM_172824 239839 Mm.272045 NM_172824 ENSMUSG00000022833 Ccdc14 G630039H03Rik coiled-coil domain containing 14 protein-coding common_peak1_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-2 chr14 20834487 20834768 + 0.809260849721102 NA Intergenic Intergenic -2035 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-4 chr15 62301636 62302025 + 0.809260849721102 NA Intergenic Intergenic -82379 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-7 chr17 23749315 23749736 + 0.809260849721102 NA non-coding (NR_015472, exon 1 of 3) non-coding (NR_015472, exon 1 of 3) 289 NR_015472 638247 Mm.382600 NR_015472 ENSMUSG00000097006 9530082P21Rik E030034P13Rik RIKEN cDNA 9530082P21 gene ncRNA common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-4 chr12 111665406 111665680 + 0.809260849721102 NA Intergenic Intergenic 6795 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-2 chr1 54827066 54827284 + 0.809260849721102 NA intron (NM_001081433, intron 2 of 27) intron (NM_001081433, intron 2 of 27) 99212 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-3 chr13 108229801 108230243 + 0.809260849721102 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 15618 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102 chr10 43657896 43658110 + 0.809260849721102 NA Intergenic Intergenic 64576 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102 chr1 180388292 180388801 + 0.809260849721102 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -57997 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-6 chr14 57664335 57664834 + 0.809260849721102 NA intron (NM_020506, intron 1 of 22) intron (NM_020506, intron 1 of 22) 372 NM_020506 57258 Mm.202747 NM_020506 ENSMUSG00000021952 Xpo4 B430309A01Rik|mKIAA1721 exportin 4 protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-6 chr18 61381100 61381467 + 0.809260849721102 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 16617 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak1_15_22_-0.793521911839217_4.1268010001374_0.809260849721102 chr12 70695804 70696097 + 0.809260849721102 NA Intergenic Intergenic -129564 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-8 chr17 56614297 56614662 + 0.809260849721102 NA TTS (NM_018730) TTS (NM_018730) 1084 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-12 chr4 141425975 141426196 + 0.809260849721102 NA TTS (NM_013868) TTS (NM_013868) 5306 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-5 chr15 102350976 102351325 + 0.809260849721102 NA promoter-TSS (NM_153416) promoter-TSS (NM_153416) 323 NR_155425 102640093 Mm.385825 NR_155425 ENSMUSG00000116402 Gm36246 - predicted gene, 36246 ncRNA unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-2 chr13 34677082 34677598 + 0.809260849721102 NA Intergenic Intergenic 24417 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 - predicted gene 15908 ncRNA unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102 chr11 102642358 102642868 + 0.809260849721102 NA Intergenic Intergenic -18197 NR_033474 77132 Mm.194729 NR_033474 2810433D01Rik - RIKEN cDNA 2810433D01 gene ncRNA common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-10 chr2 20520943 20521241 + 0.809260849721102 NA intron (NM_001177630, intron 1 of 17) intron (NM_001177630, intron 1 of 17) 1579 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-7 chr2 109678504 109678771 + 0.809260849721102 NA intron (NM_001285419, intron 1 of 1) intron (NM_001285419, intron 1 of 1) 1605 NM_001285419 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-7 chr15 5517117 5517668 + 0.809260849721102 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 21074 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-11 chr2 58552166 58552660 + 0.809260849721102 NA intron (NM_001110204, intron 1 of 12) B1F|SINE|Alu 8997 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-15 chr3 158905675 158905956 + 0.809260849721102 NA Intergenic Intergenic -170549 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-2 chr10 93757284 93757618 + 0.809260849721102 NA Intergenic Intergenic -74104 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-2 chr10 80157169 80157665 + 0.809260849721102 NA 3' UTR (NM_021565, exon 9 of 9) 3' UTR (NM_021565, exon 9 of 9) 7735 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-5 chr15 95016018 95016315 + 0.809260849721102 NA intron (NM_178789, intron 6 of 7) intron (NM_178789, intron 6 of 7) 133152 NR_015482 100043315 Mm.159041 NR_015482 ENSMUSG00000100603 LOC100043315 - uncharacterized LOC100043315 ncRNA common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-6 chr17 13701064 13701446 + 0.809260849721102 NA Intergenic Intergenic -59286 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-4 chr11 5836571 5836869 + 0.809260849721102 NA intron (NM_017401, intron 1 of 10) intron (NM_017401, intron 1 of 10) 1296 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-8 chr2 154613127 154613403 + 0.809260849721102 NA promoter-TSS (NM_199304) promoter-TSS (NM_199304) -103 NM_199304 228807 Mm.103555 NM_199304 ENSMUSG00000059842 Zfp341 Znf341 zinc finger protein 341 protein-coding common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-5 chr17 70751394 70751602 + 0.809260849721102 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 95279 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-12 chr3 98105747 98106182 + 0.809260849721102 NA intron (NM_010928, intron 11 of 33) intron (NM_010928, intron 11 of 33) -54670 NM_027665 71078 Mm.50711 NM_027665 ENSMUSG00000043468 Adam30 4933424D07Rik|svph4 a disintegrin and metallopeptidase domain 30 protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-3 chr11 8449488 8449733 + 0.809260849721102 NA intron (NM_001083587, intron 23 of 30) intron (NM_001083587, intron 23 of 30) 214925 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-5 chr13 6225880 6226243 + 0.809260849721102 NA Intergenic Intergenic -322096 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-7 chr19 55439602 55439879 + 0.809260849721102 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 123683 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-13 chr2 129129863 129130183 + 0.809260849721102 NA intron (NM_025395, intron 1 of 3) intron (NM_025395, intron 1 of 3) 323 NM_025395 66170 Mm.40621 NM_025395 ENSMUSG00000037938 Chchd5 1110027L01Rik|AW045710 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102 chr1 97769696 97769922 + 0.809260849721102 NA promoter-TSS (NM_026250) promoter-TSS (NM_026250) 283 NM_173760 227399 Mm.220817 NM_173760 ENSMUSG00000040648 Ppip5k2 AW555814|Cfap160|D330021B20|Hisppd1|Vip2|mKIAA0433 diphosphoinositol pentakisphosphate kinase 2 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-16 chr8 86623380 86623741 + 0.809260849721102 NA promoter-TSS (NM_025827) promoter-TSS (NM_025827) -483 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-14 chr3 95855540 95855749 + 0.809260849721102 NA 5' UTR (NM_027541, exon 1 of 16) 5' UTR (NM_027541, exon 1 of 16) 109 NM_027541 70767 Mm.279872 NM_027541 ENSMUSG00000015748 Prpf3 3632413F13Rik pre-mRNA processing factor 3 protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-2 chr11 120714110 120714440 + 0.809260849721102 NA promoter-TSS (NM_016665) promoter-TSS (NM_016665) 322 NM_153545 217366 Mm.347545 NM_153545 ENSMUSG00000025145 Lrrc45 BC023296 leucine rich repeat containing 45 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-15 chr8 72443955 72444172 + 0.809260849721102 NA promoter-TSS (NM_028500) promoter-TSS (NM_028500) 183 NM_028170 72254 Mm.30136 NM_028170 ENSMUSG00000052794 1700030K09Rik - RIKEN cDNA 1700030K09 gene protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-16 chr7 37563872 37564428 + 0.809260849721102 NA intron (NM_172385, intron 4 of 5) intron (NM_172385, intron 4 of 5) 205602 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-11 chr2 29055027 29055366 + 0.809260849721102 NA promoter-TSS (NM_001166705) promoter-TSS (NM_001166705) -130 NM_001166705 329375 Mm.425079 NM_001085514 ENSMUSG00000079502 Cfap77 1700101E01Rik|Gm823 cilia and flagella associated protein 77 protein-coding unique_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102 chr10 80281780 80282069 + 0.809260849721102 NA intron (NM_133188, intron 7 of 11) intron (NM_133188, intron 7 of 11) 3760 NR_105876 102466207 NR_105876 ENSMUSG00000098672 Mir6911 Gm27822|mmu-mir-6911 microRNA 6911 ncRNA common_peak1_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-5 chr8 64583621 64583948 + 0.809260849721102 NA Intergenic PB1D7|SINE|Alu -69343 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-8 chr9 95637376 95637731 + 0.809260849721102 NA promoter-TSS (NM_029620) promoter-TSS (NM_029620) -75 NM_029620 76477 Mm.46016 NM_029620 ENSMUSG00000015354 Pcolce2 2400001O18Rik|Pcpe2 procollagen C-endopeptidase enhancer 2 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-10 chr2 125014820 125015108 + 0.809260849721102 NA Intergenic Intergenic -53163 NM_175034 317750 Mm.330538 NM_175034 ENSMUSG00000035183 Slc24a5 F630045L20Rik|JSX|NCKX5|NCX5|Oca6 solute carrier family 24, member 5 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-13 chr4 89125490 89126072 + 0.809260849721102 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 2445 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-4 chr11 33860422 33860759 + 0.809260849721102 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -17005 NM_001290690 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-7 chr16 35490347 35490563 + 0.809260849721102 NA intron (NM_028295, intron 1 of 16) CpG 418 NM_028295 72599 Mm.71015 NM_028295 ENSMUSG00000022844 Pdia5 2700053F16Rik|AU015525|Pdir protein disulfide isomerase associated 5 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-9 chr17 56256868 56257318 + 0.809260849721102 NA exon (NM_010192, exon 1 of 1) exon (NM_010192, exon 1 of 1) 300 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-11 chr3 122365757 122366066 + 0.809260849721102 NA Intergenic Intergenic -53846 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-3 chr11 52003801 52004058 + 0.809260849721102 NA promoter-TSS (NM_153785) promoter-TSS (NM_153785) -292 NM_001166657 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding unique_peak1_15_22_-0.793521911839217_4.1268010001374_0.809260849721102 chr13 64439322 64439644 + 0.809260849721102 NA 3' UTR (NM_053180, exon 8 of 8) 3' UTR (NM_053180, exon 8 of 8) 6930 NM_053180 105278 Mm.74982 NM_053180 ENSMUSG00000021483 Cdk20 4932702G04Rik|AU019450|AW558027|CDCH|Ccrk|PNQLARE|p42 cyclin-dependent kinase 20 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-17 chr8 120971465 120971683 + 0.809260849721102 NA Intergenic Intergenic 111536 NR_045471 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-3 chr10 12822421 12822894 + 0.809260849721102 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 39078 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-5 chr15 61609305 61609630 + 0.809260849721102 NA Intergenic Intergenic 164984 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-6 chr16 14352919 14353185 + 0.809260849721102 NA Intergenic Intergenic -8506 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-9 chr6 30896542 30896774 + 0.809260849721102 NA TTS (NM_054073) TTS (NM_054073) 136 NR_149738 54160 Mm.39896 NM_017478 ENSMUSG00000025607 Copg2 AW227625|gamma-2-COP coatomer protein complex, subunit gamma 2 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-14 chr6 148946790 148947323 + 0.809260849721102 NA promoter-TSS (NM_019643) promoter-TSS (NM_019643) -586 NM_001361398 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-13 chr5 38446627 38446915 + 0.809260849721102 NA intron (NM_145559, intron 4 of 10) intron (NM_145559, intron 4 of 10) 33535 NM_001102414 117591 Mm.260137 NM_145559 ENSMUSG00000005107 Slc2a9 Glut9|SLC2A9B|SLC2a9A solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-9 chr19 42085964 42086277 + 0.809260849721102 NA intron (NM_198108, intron 1 of 4) intron (NM_198108, intron 1 of 4) 250 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding common_peak1_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-4 chr5 115017350 115017598 + 0.809260849721102 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 5950 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-4 chr14 122983498 122983712 + 0.809260849721102 NA promoter-TSS (NM_001360598) promoter-TSS (NM_001360598) -322 NR_153663 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding unique_peak1_26_13_0.672246908415798_4.1434783762655_0.809260849721102-8 chr16 92397715 92398258 + 0.809260849721102 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) 2092 NM_019466 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-15 chr7 25380804 25381185 + 0.809260849721102 NA intron (NM_001039507, intron 8 of 9) intron (NM_001039507, intron 8 of 9) 4175 NR_073027 654804 Mm.389841 NM_001039540 ENSMUSG00000053714 4732471J01Rik - RIKEN cDNA 4732471J01 gene ncRNA common_peak1_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-3 chr4 83917338 83917655 + 0.809260849721102 NA Intergenic Intergenic 127383 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-12 chr2 125948871 125949240 + 0.809260849721102 NA intron (NM_175154, intron 8 of 9) intron (NM_175154, intron 8 of 9) 82832 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak2_15_22_-0.793521911839217_4.1268010001374_0.809260849721102-8 chr15 80059675 80059951 + 0.809260849721102 NA Intergenic Intergenic 18766 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_26_13_0.672246908415798_4.1434783762655_0.809260849721102-6 chr2 52624529 52624848 + 0.809260849721102 NA intron (NM_001037099, intron 2 of 13) intron (NM_001037099, intron 2 of 13) 51171 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding common_peak2_127_84_0.299484169360362_6.55913302081788_0.808754618954787-2 chr8 11326877 11328229 + 0.808754618954787 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -14727 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_102_105_-0.330333089504972_6.56275390981071_0.808754618954787 chr19 8965935 8966791 + 0.808754618954787 NA promoter-TSS (NM_026007) promoter-TSS (NM_026007) -678 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_128_84_0.310632216725941_6.56470704450067_0.808754618954787 chr1 58663620 58664720 + 0.808754618954787 NA intron (NM_001347056, intron 10 of 13) intron (NM_001347056, intron 10 of 13) 11529 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak2_127_84_0.299484169360362_6.55913302081788_0.808754618954787 chr7 99268669 99269997 + 0.808754618954787 NA intron (NM_001048167, intron 1 of 2) intron (NM_001048167, intron 1 of 2) 987 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding common_peak1_127_84_0.299484169360362_6.55913302081788_0.808754618954787 chr4 137497074 137498237 + 0.808754618954787 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 28852 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_102_105_-0.330333089504972_6.56275390981071_0.808754618954787 chr11 62280944 62282314 + 0.808754618954787 NA promoter-TSS (NM_027198) promoter-TSS (NM_027198) 156 NM_029704 72795 Mm.489722 NM_028360 ENSMUSG00000042298 Ttc19 2010204O13Rik|2810460C24Rik|AI505442 tetratricopeptide repeat domain 19 protein-coding common_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824-4 chr6 99485406 99485891 + 0.808568985218824 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 35345 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-2 chr1 149960972 149961288 + 0.808568985218824 NA intron (NM_008869, intron 1 of 17) intron (NM_008869, intron 1 of 17) 160 NM_008869 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824-2 chr11 80565180 80565737 + 0.808568985218824 NA intron (NM_177390, intron 20 of 21) intron (NM_177390, intron 20 of 21) -56352 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-9 chr5 137600772 137600979 + 0.808568985218824 NA promoter-TSS (NM_001254762) promoter-TSS (NM_001254762) -167 NM_001254762 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-8 chr4 134758784 134759551 + 0.808568985218824 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 8837 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824-2 chr7 45215956 45216828 + 0.808568985218824 NA intron (NM_001285498, intron 1 of 11) intron (NM_001285498, intron 1 of 11) 639 NM_001285498 21677 Mm.3019 NM_011565 ENSMUSG00000030796 Tead2 ETEF-1|ETF|Etdf|TEAD-2|TEF-4|TEF4 TEA domain family member 2 protein-coding common_peak1_29_37_-0.617394968244456_4.93923002932136_0.808568985218824-2 chr7 25246264 25246692 + 0.808568985218824 NA intron (NM_010155, intron 1 of 3) intron (NM_010155, intron 1 of 3) 4280 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-4 chr2 30066549 30066858 + 0.808568985218824 NA 5' UTR (NM_001204875, exon 1 of 8) 5' UTR (NM_001204875, exon 1 of 8) 229 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-10 chr8 46868600 46868935 + 0.808568985218824 NA Intergenic Intergenic -118120 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding unique_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824 chr12 85219547 85219946 + 0.808568985218824 NA intron (NM_145445, intron 1 of 7) CpG 265 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-6 chr3 107759904 107760139 + 0.808568985218824 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 448 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-3 chr1 194977445 194977912 + 0.808568985218824 NA promoter-TSS (NR_033564) promoter-TSS (NR_033564) -719 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA unique_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824-3 chr5 125441691 125442338 + 0.808568985218824 NA intron (NM_001359486, intron 1 of 3) CpG 446 NM_029752 76809 Mm.290720 NM_029752 ENSMUSG00000037905 Bri3bp 2410150I18Rik|AI841257|AW742481 Bri3 binding protein protein-coding common_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824-3 chr3 89202968 89203423 + 0.808568985218824 NA non-coding (NR_122037, exon 2 of 12) non-coding (NR_122037, exon 2 of 12) 270 NR_122037 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding unique_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824-2 chr16 46496357 46497120 + 0.808568985218824 NA exon (NM_021497, exon 1 of 7) exon (NM_021497, exon 1 of 7) 229 NM_021496 58998 Mm.40477 NM_021495 ENSMUSG00000022656 Nectin3 2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113|Pvrl3 nectin cell adhesion molecule 3 protein-coding common_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824-5 chr7 27194821 27195416 + 0.808568985218824 NA promoter-TSS (NM_001243888) promoter-TSS (NM_001243888) 642 NM_001046637 53607 Mm.386890 NM_015782 ENSMUSG00000061479 Snrpa C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding unique_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824 chr16 34856950 34857526 + 0.808568985218824 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 72288 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824 chr1 171114150 171114517 + 0.808568985218824 NA Intergenic Intergenic -7328 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824 chr1 91799938 91800528 + 0.808568985218824 NA Intergenic Intergenic -1228 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824 chr11 68314190 68314604 + 0.808568985218824 NA intron (NM_008744, intron 2 of 6) intron (NM_008744, intron 2 of 6) 72429 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-7 chr3 126832054 126832518 + 0.808568985218824 NA intron (NM_001025438, intron 14 of 18) intron (NM_001025438, intron 14 of 18) 111100 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding common_peak2_29_37_-0.617394968244456_4.93923002932136_0.808568985218824-2 chr11 119776730 119777454 + 0.808568985218824 NA intron (NM_028898, intron 6 of 33) intron (NM_028898, intron 6 of 33) 57273 NR_045313 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824-4 chr9 96860870 96861410 + 0.808568985218824 NA intron (NM_001289645, intron 1 of 6) intron (NM_001289645, intron 1 of 6) 28334 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak1_29_37_-0.617394968244456_4.93923002932136_0.808568985218824 chr1 156718435 156718824 + 0.808568985218824 NA intron (NM_145413, intron 1 of 7) CpG 281 NM_145413 215015 Mm.229107 NM_145413 ENSMUSG00000033557 Fam20b C530043G21Rik|mKIAA0475 family with sequence similarity 20, member B protein-coding common_peak1_44_25_0.510928429285492_4.95590393278384_0.808568985218824-3 chr15 25366212 25366628 + 0.808568985218824 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 47344 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_44_25_0.510928429285492_4.95590393278384_0.808568985218824-5 chr2 131178944 131179566 + 0.808568985218824 NA exon (NM_007682, exon 1 of 1) exon (NM_007682, exon 1 of 1) 812 NM_007682 12616 Mm.440169 NM_007682 ENSMUSG00000068267 Cenpb CENP-B centromere protein B protein-coding common_peak2_76_47_0.395871951450033_5.78289847644617_0.808188089851521-3 chr7 24399056 24399881 + 0.808188089851521 NA promoter-TSS (NM_028047) promoter-TSS (NM_028047) -160 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_76_47_0.395871951450033_5.78289847644617_0.808188089851521-2 chr18 39490040 39490677 + 0.808188089851521 NA Intergenic CpG -3113 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_56_63_-0.450000943227399_5.7749995283863_0.808188089851521-3 chr19 8990352 8990768 + 0.808188089851521 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 1276 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_56_63_-0.450000943227399_5.7749995283863_0.808188089851521 chr16 33594272 33595086 + 0.808188089851521 NA intron (NM_001083902, intron 5 of 11) intron (NM_001083902, intron 5 of 11) 76084 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak2_76_47_0.395871951450033_5.78289847644617_0.808188089851521 chr10 75516669 75517251 + 0.808188089851521 NA intron (NM_001347201, intron 1 of 5) intron (NM_001347201, intron 1 of 5) 421 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak1_76_47_0.395871951450033_5.78289847644617_0.808188089851521 chr18 35815814 35816777 + 0.808188089851521 NA Intergenic Intergenic -13493 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_56_63_-0.450000943227399_5.7749995283863_0.808188089851521-2 chr18 61054905 61055363 + 0.808188089851521 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 9984 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak1_82_87_-0.371107997746379_6.27387761976411_0.808047149029747 chr7 98703146 98704052 + 0.808047149029747 NA promoter-TSS (NR_144495) promoter-TSS (NR_144495) 352 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_105_68_0.330190618918447_6.27361976623739_0.808047149029747-2 chr8 123518962 123519686 + 0.808047149029747 NA intron (NM_018855, intron 1 of 10) intron (NM_018855, intron 1 of 10) 489 NM_018855 104346 Mm.117265 NM_018855 ENSMUSG00000040220 Gas8 Gas11 growth arrest specific 8 protein-coding common_peak2_105_68_0.330190618918447_6.27361976623739_0.808047149029747 chr5 29841691 29842542 + 0.808047149029747 NA Intergenic Intergenic -106180 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak1_152_102_0.277946555034899_6.82547380470067_0.807938574271454 chr10 43220736 43222011 + 0.807938574271454 NA promoter-TSS (NM_001168289) promoter-TSS (NM_001168289) -113 NM_027772 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak1_152_102_0.277946555034899_6.82547380470067_0.807938574271454-2 chr15 80914623 80916435 + 0.807938574271454 NA intron (NM_177124, intron 15 of 21) intron (NM_177124, intron 15 of 21) -24510 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_208_143_0.241318831908855_7.29058441739674_0.807410978262193 chr5 137531365 137533579 + 0.807410978262193 NA intron (NM_010312, intron 1 of 9) intron (NM_010312, intron 1 of 9) 834 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak1_113_115_-0.315036917928215_6.70046253616346_0.807261277699032 chr7 101836561 101838324 + 0.807261277699032 NA intron (NM_010567, intron 1 of 28) intron (NM_010567, intron 1 of 28) 382 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak1_116_76_0.313367858641877_6.42347047001584_0.807167766909067 chr8 94602161 94603375 + 0.807167766909067 NA intron (NM_026274, intron 1 of 14) intron (NM_026274, intron 1 of 14) 827 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding common_peak2_116_76_0.313367858641877_6.42347047001584_0.807167766909067 chr1 63112949 63113923 + 0.807167766909067 NA intron (NM_001114609, intron 1 of 11) intron (NM_001114609, intron 1 of 11) 831 NM_001081436 227195 Mm.74718 NM_001081436 ENSMUSG00000040865 Ino80d 7330405I11|A430093A21Rik|BC010584 INO80 complex subunit D protein-coding common_peak1_117_76_0.325559565054534_6.42956632322217_0.807167766909067 chr18 9957668 9958873 + 0.807167766909067 NA promoter-TSS (NM_153552) promoter-TSS (NM_153552) 90 NM_153552 225160 Mm.219648 NM_153552 ENSMUSG00000024287 Thoc1 3110002N20Rik|AW107452|NMP-84 THO complex 1 protein-coding common_peak2_117_76_0.325559565054534_6.42956632322217_0.807167766909067 chr17 13699781 13700785 + 0.807167766909067 NA Intergenic Intergenic -60258 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak1_426_307_0.167918619035616_8.35074585021271_0.807121245417544 chr3 90613281 90615479 + 0.807121245417544 NA TTS (NM_011313) TTS (NM_011313) 1486 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_67_41_0.410458454984447_5.59754665027098_0.806748989100794-3 chr5 142962127 142962700 + 0.806748989100794 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 2058 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak1_67_41_0.410458454984447_5.59754665027098_0.806748989100794 chr14 121797988 121798610 + 0.806748989100794 NA promoter-TSS (NM_134074) promoter-TSS (NM_134074) -565 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_49_56_-0.470591152012433_5.59759443815853_0.806748989100794-2 chr4 106847601 106848296 + 0.806748989100794 NA Intergenic Intergenic -42941 NM_001347159 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak1_49_56_-0.470591152012433_5.59759443815853_0.806748989100794 chr10 68239959 68240611 + 0.806748989100794 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 38441 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_67_41_0.410458454984447_5.59754665027098_0.806748989100794-2 chr3 88492401 88492987 + 0.806748989100794 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 618 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_49_56_-0.470591152012433_5.59759443815853_0.806748989100794 chr4 114406313 114406862 + 0.806748989100794 NA promoter-TSS (NM_001085549) promoter-TSS (NM_001085549) -137 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427-2 chr7 64996931 64997559 + 0.806432121853427 NA intron (NM_183087, intron 1 of 9) intron (NM_183087, intron 1 of 9) -124205 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427-2 chr10 78297725 78298601 + 0.806432121853427 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 42044 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak2_51_30_0.464286884494994_5.18633975263437_0.806432121853427-3 chr1 162093790 162094078 + 0.806432121853427 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 88965 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA common_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427-3 chr11 76135222 76135698 + 0.806432121853427 NA intron (NM_026664, intron 6 of 21) intron (NM_026664, intron 6 of 21) 44170 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak2_51_30_0.464286884494994_5.18633975263437_0.806432121853427-4 chr8 124332031 124332471 + 0.806432121853427 NA intron (NM_139272, intron 9 of 15) intron (NM_139272, intron 9 of 15) 100857 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427-4 chr15 86201807 86202561 + 0.806432121853427 NA Intergenic Intergenic -12275 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding unique_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427 chr11 29373173 29374133 + 0.806432121853427 NA promoter-TSS (NM_176841) promoter-TSS (NM_176841) -519 NM_176841 108686 Mm.338284 NM_176841 ENSMUSG00000032740 Ccdc88a A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1 coiled coil domain containing 88A protein-coding common_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427-5 chr5 114127661 114128188 + 0.806432121853427 NA 5' UTR (NM_175016, exon 1 of 4) 5' UTR (NM_175016, exon 1 of 4) 294 NM_001359940 231642 Mm.332593 NM_175016 ENSMUSG00000044339 Alkbh2 9530023G02|AU016977|Abh2|mABH2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427 chr1 91278371 91279136 + 0.806432121853427 NA intron (NM_001355764, intron 8 of 10) intron (NM_001355764, intron 8 of 10) -19585 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak2_51_30_0.464286884494994_5.18633975263437_0.806432121853427 chr1 92473261 92473681 + 0.806432121853427 NA intron (NM_024197, intron 1 of 9) CpG 287 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak1_51_30_0.464286884494994_5.18633975263437_0.806432121853427-6 chr8 34224145 34224717 + 0.806432121853427 NA Intergenic Intergenic -57719 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak2_51_30_0.464286884494994_5.18633975263437_0.806432121853427-2 chr1 120033309 120033826 + 0.806432121853427 NA intron (NM_001012322, intron 4 of 13) intron (NM_001012322, intron 4 of 13) 26587 NM_001012322 319229 Mm.189223 NM_001012322 ENSMUSG00000026387 Sctr 6530402O03Rik secretin receptor protein-coding common_peak2_35_43_-0.567720369964593_5.175571433655_0.806432121853421-4 chr3 107795557 107796073 + 0.806432121853421 NA Intergenic Intergenic -35346 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_35_43_-0.567720369964593_5.175571433655_0.806432121853421-2 chr18 15063971 15064504 + 0.806432121853421 NA promoter-TSS (NM_001142731) promoter-TSS (NM_001142731) -655 NM_001142731 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding common_peak2_35_43_-0.567720369964593_5.175571433655_0.806432121853421-6 chr9 69442802 69443169 + 0.806432121853421 NA Intergenic Intergenic -10698 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_35_43_-0.567720369964593_5.175571433655_0.806432121853421-3 chr18 33462913 33463446 + 0.806432121853421 NA promoter-TSS (NR_045415) promoter-TSS (NR_045415) 455 NM_001267717 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding common_peak1_35_43_-0.567720369964593_5.175571433655_0.806432121853421-3 chr3 38043013 38043602 + 0.806432121853421 NA Intergenic Intergenic 144494 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_35_43_-0.567720369964593_5.175571433655_0.806432121853421 chr14 30715286 30716023 + 0.806432121853421 NA promoter-TSS (NM_001166532) promoter-TSS (NM_001166532) 39 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak1_35_43_-0.567720369964593_5.175571433655_0.806432121853421 chr1 82586161 82586767 + 0.806432121853421 NA promoter-TSS (NM_007734) promoter-TSS (NM_007734) 385 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding common_peak2_35_43_-0.567720369964593_5.175571433655_0.806432121853421-5 chr6 91878080 91878566 + 0.806432121853421 NA intron (NM_172730, intron 1 of 10) CpG 270 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding common_peak1_35_43_-0.567720369964593_5.175571433655_0.806432121853421-2 chr13 6191418 6191944 + 0.806432121853421 NA Intergenic Intergenic 330192 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak1_35_43_-0.567720369964593_5.175571433655_0.806432121853421 chr2 3332798 3333444 + 0.806432121853421 NA promoter-TSS (NM_001013376) promoter-TSS (NM_001013376) -493 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding common_peak2_179_122_0.254743682940855_7.06988634680967_0.806283058928329 chr3 34170769 34171910 + 0.806283058928329 NA Intergenic Intergenic -89985 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak2_1_3_-1.24879501706247_1.37560249146876_0.806179973983887 chr13 40659993 40660270 + 0.806179973983887 NA Intergenic MER2|DNA|TcMar-Tigger -67677 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA unique_peak2_2_3_-0.667959414835017_1.66602029258249_0.806179973983887 chr4 63752277 63752500 + 0.806179973983887 NA Intergenic B4|SINE|B4 -7275 NM_177371 326623 Mm.208152 NM_177371 ENSMUSG00000050395 Tnfsf15 Tl1|Tl1a|Tnlg1b|Vegi tumor necrosis factor (ligand) superfamily, member 15 protein-coding unique_peak1_3_2_0.159187502643128_1.66455625204272_0.806179973983887 chr11 67896706 67896932 + 0.806179973983887 NA intron (NM_173754, intron 5 of 14) B1F1|SINE|Alu 25334 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding unique_peak1_3_2_0.159187502643128_1.66455625204272_0.806179973983887-2 chr11 117828478 117828667 + 0.806179973983887 NA intron (NM_027827, intron 2 of 10) URR1B|DNA|hAT-Charlie -2558 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding unique_peak2_2_2_-0.252921915556173_1.45850154294307_0.806179973983887 chr13 32429218 32429427 + 0.806179973983887 NA Intergenic (TCTG)n|Simple_repeat|Simple_repeat -90778 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_3_3_-0.255849996635716_1.87207500168214_0.806179973983887 chr9 21956282 21956471 + 0.806179973983887 NA promoter-TSS (NR_132099) promoter-TSS (NR_132099) -370 NR_132099 100049077 Mm.46647 NR_132099 Gm45914 - predicted gene, 45914 ncRNA unique_peak2_2_3_-0.667959414835017_1.66602029258249_0.806179973983887-2 chr6 121071897 121072138 + 0.806179973983887 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) 7553 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA unique_peak2_3_3_-0.255849996635716_1.87207500168214_0.806179973983887 chr2 117958044 117958246 + 0.806179973983887 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 136217 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak2_1_3_-1.24879501706247_1.37560249146876_0.806179973983887-2 chr16 77479529 77479743 + 0.806179973983887 NA intron (NR_015543, intron 3 of 4) B1_Mur3|SINE|Alu -119300 NR_029535 387229 NR_029535 ENSMUSG00000065530 Mir99a Mirn99a|mir-99a|mmu-mir-99a microRNA 99a ncRNA common_peak1_166_112_0.269693409611357_6.95502566722087_0.806162152839507 chr8 121084436 121085878 + 0.806162152839507 NA exon (NM_010426, exon 1 of 2) exon (NM_010426, exon 1 of 2) 771 NM_010426 15227 Mm.33897 NM_010426 ENSMUSG00000042812 Foxf1 AI450827|FREAC1|Foxf1a|Freac-1|HFH-8|Hfh8 forkhead box F1 protein-coding common_peak1_285_266_-0.200132357999665_7.96062975268772_0.805482980539899 chr11 75459355 75461230 + 0.805482980539899 NA Intergenic Intergenic -1247 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak2_189_183_-0.248851561904475_7.39913617510478_0.805286473306045 chr5 136477863 136480341 + 0.805286473306045 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 86879 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_219_209_-0.229523175461671_7.59948392993529_0.805225125347421 chr13 51974633 51977260 + 0.805225125347421 NA Intergenic Intergenic -120795 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak1_96_61_0.357414244024203_6.13290343239898_0.804964541269708 chr15 81871390 81872323 + 0.804964541269708 NA promoter-TSS (NM_080633) promoter-TSS (NM_080633) 36 NM_026737 68479 Mm.271715 NM_026737 ENSMUSG00000061360 Phf5a 1110007B08Rik PHD finger protein 5A protein-coding common_peak1_73_79_-0.398022333403165_6.12291692818578_0.804964541269695 chr1 64956146 64957174 + 0.804964541269695 NA intron (NM_001039493, intron 1 of 7) CpG 164 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_73_79_-0.398022333403165_6.12291692818578_0.804964541269695 chr2 167833916 167834688 + 0.804964541269695 NA Intergenic Intergenic -98025 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_65_71_-0.409913996617798_5.96496800313341_0.804633617149182 chr3 144603510 144604113 + 0.804633617149182 NA Intergenic Intergenic 33384 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_65_71_-0.409913996617798_5.96496800313341_0.804633617149182 chr3 144603554 144604081 + 0.804633617149182 NA Intergenic Intergenic 33390 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak2_65_71_-0.409913996617798_5.96496800313341_0.804633617149182-2 chr4 126148294 126149424 + 0.804633617149182 NA intron (NM_172145, intron 1 of 2) CpG 856 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_65_71_-0.409913996617798_5.96496800313341_0.804633617149182-3 chr5 36293407 36294595 + 0.804633617149182 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) -7569 NR_106162 102465792 NR_106162 ENSMUSG00000098884 Mir7689 Gm27434|mmu-mir-7689 microRNA 7689 ncRNA common_peak1_86_54_0.374388910080061_5.96855416856469_0.804633617149182 chr2 69897238 69897876 + 0.804633617149182 NA exon (NM_001303033, exon 1 of 39) exon (NM_001303033, exon 1 of 39) 311 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding common_peak2_86_54_0.374388910080061_5.96855416856469_0.804633617149182 chr5 121397998 121398739 + 0.804633617149182 NA intron (NM_172722, intron 1 of 23) CpG 386 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding common_peak1_86_54_0.374388910080061_5.96855416856469_0.804633617149182-2 chr7 102209514 102210146 + 0.804633617149182 NA promoter-TSS (NM_001287167) promoter-TSS (NM_001287167) 37 NM_001287167 269966 Mm.439800 NM_022979 ENSMUSG00000063550 Nup98 4732457F17|AI849286|Nup96 nucleoporin 98 protein-coding common_peak2_162_159_-0.266785105162938_7.18853554230589_0.804407122182547-2 chr8 110822440 110824943 + 0.804407122182547 NA intron (NM_133953, intron 14 of 25) intron (NM_133953, intron 14 of 25) 14907 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_162_159_-0.266785105162938_7.18853554230589_0.804407122182547 chr7 90442559 90444256 + 0.804407122182547 NA exon (NM_145151, exon 1 of 1) exon (NM_145151, exon 1 of 1) 626 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826-2 chr11 100356122 100356321 + 0.804350088532826 NA promoter-TSS (NM_177981) promoter-TSS (NM_177981) -80 NM_010404 15114 Mm.281700 NM_010404 ENSMUSG00000006930 Hap1 HAP-1 huntingtin-associated protein 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-14 chr13 60664584 60665087 + 0.804350088532826 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 62624 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-11 chr3 116204317 116204914 + 0.804350088532826 NA Intergenic Intergenic 48869 NM_022427 64378 Mm.40025 NM_022427 ENSMUSG00000068696 Gpr88 AW061286|Strg G-protein coupled receptor 88 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826 chr1 52799168 52799520 + 0.804350088532826 NA exon (NM_008384, exon 2 of 6) exon (NM_008384, exon 2 of 6) 18344 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-36 chr9 83588709 83588997 + 0.804350088532826 NA intron (NM_172507, intron 2 of 3) intron (NM_172507, intron 2 of 3) 40515 NM_172507 212531 Mm.491246 NM_172507 ENSMUSG00000032261 Sh3bgrl2 A930014C21Rik|AA408038|B930089I21 SH3 domain binding glutamic acid-rich protein like 2 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-18 chr9 111428750 111429228 + 0.804350088532826 NA Intergenic Intergenic -10092 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-4 chr10 12892998 12893244 + 0.804350088532826 NA Intergenic Intergenic 30006 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-5 chr12 102261742 102262001 + 0.804350088532826 NA intron (NM_172152, intron 14 of 16) intron (NM_172152, intron 14 of 16) -21203 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826-6 chr7 112056234 112056442 + 0.804350088532826 NA intron (NM_133758, intron 3 of 27) intron (NM_133758, intron 3 of 27) 32832 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-25 chr2 114087204 114087435 + 0.804350088532826 NA Intergenic Intergenic 32923 NR_028422 100303644 Mm.330469 NR_028422 ENSMUSG00000092397 C130080G10Rik - RIKEN cDNA C130080G10 gene ncRNA unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-8 chr3 51661242 51661597 + 0.804350088532826 NA intron (NM_174995, intron 1 of 4) (GA)n|Simple_repeat|Simple_repeat 240 NM_001310482 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-7 chr4 88515132 88515367 + 0.804350088532826 NA Intergenic Intergenic 7545 NM_010510 15977 Mm.1245 NM_010510 ENSMUSG00000048806 Ifnb1 IFN-beta|IFNB|Ifb interferon beta 1, fibroblast protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-13 chr12 51888153 51888536 + 0.804350088532826 NA intron (NM_177171, intron 31 of 35) intron (NM_177171, intron 31 of 35) -58808 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826 chr8 77092422 77092622 + 0.804350088532826 NA intron (NM_001083906, intron 3 of 8) intron (NM_001083906, intron 3 of 8) 190014 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-15 chr13 97926850 97927114 + 0.804350088532826 NA intron (NM_012026, intron 35 of 35) intron (NM_012026, intron 35 of 35) 175870 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826-5 chr2 35714385 35714671 + 0.804350088532826 NA intron (NM_001001602, intron 6 of 13) intron (NM_001001602, intron 6 of 13) 17796 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-14 chr6 17498593 17498930 + 0.804350088532826 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 34804 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-3 chr12 84177479 84177891 + 0.804350088532826 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 16330 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-26 chr3 136577640 136578073 + 0.804350088532826 NA Intergenic Intergenic -92210 NM_008913 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-3 chr15 57906922 57907209 + 0.804350088532826 NA Intergenic Intergenic -5134 NM_001081396 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-31 chr7 90310272 90310670 + 0.804350088532826 NA intron (NM_001040085, intron 1 of 18) AT_rich|Low_complexity|Low_complexity 8116 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-2 chr11 49089876 49090180 + 0.804350088532826 NA intron (NM_008330, intron 1 of 1) intron (NM_008330, intron 1 of 1) 3011 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-12 chr12 35224962 35225282 + 0.804350088532826 NA Intergenic Intergenic -30225 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-10 chr6 120916761 120917054 + 0.804350088532826 NA promoter-TSS (NM_007544) promoter-TSS (NM_007544) -83 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-12 chr8 84908681 84908924 + 0.804350088532826 NA exon (NM_010062, exon 1 of 6) exon (NM_010062, exon 1 of 6) 178 NM_010062 13423 Mm.350831 NM_010062 ENSMUSG00000003812 Dnase2a Dnase2 deoxyribonuclease II alpha protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-27 chr3 144980196 144980482 + 0.804350088532826 NA Intergenic Intergenic -5294 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-12 chr8 106191767 106192062 + 0.804350088532826 NA intron (NM_001357381, intron 3 of 9) intron (NM_001357381, intron 3 of 9) 19019 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-6 chr3 69044287 69044494 + 0.804350088532826 NA intron (NM_025863, intron 1 of 2) CpG 352 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-22 chr18 65296493 65296780 + 0.804350088532826 NA intron (NM_001037294, intron 6 of 12) intron (NM_001037294, intron 6 of 12) 47775 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-17 chr9 92277744 92278200 + 0.804350088532826 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 2370 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-20 chr17 45506840 45507072 + 0.804350088532826 NA exon (NM_198608, exon 1 of 22) exon (NM_198608, exon 1 of 22) 115 NM_198608 224805 Mm.329063 NM_198608 ENSMUSG00000023938 Aars2 Aarsl|AlaRS|Gm89 alanyl-tRNA synthetase 2, mitochondrial protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-18 chr16 45121772 45122349 + 0.804350088532826 NA intron (NM_026439, intron 5 of 7) intron (NM_026439, intron 5 of 7) 28049 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-2 chr1 135846693 135847007 + 0.804350088532826 NA intron (NM_001130175, intron 6 of 13) intron (NM_001130175, intron 6 of 13) 5989 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-3 chr11 88515134 88515547 + 0.804350088532826 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -103911 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826 chr10 17947257 17947551 + 0.804350088532826 NA intron (NM_001033432, intron 1 of 3) CpG 663 NM_001033432 380629 Mm.276430 NM_001033432 ENSMUSG00000039879 Heca Gm869|HDC|HDCL hdc homolog, cell cycle regulator protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-8 chr3 104238944 104239259 + 0.804350088532826 NA Intergenic Intergenic -18695 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-11 chr12 35220505 35220986 + 0.804350088532826 NA Intergenic Intergenic -25848 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-6 chr11 20585556 20586071 + 0.804350088532826 NA intron (NM_021372, intron 1 of 1) intron (NM_021372, intron 1 of 1) 42560 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826-3 chr11 117270351 117270556 + 0.804350088532826 NA intron (NM_001113487, intron 1 of 10) intron (NM_001113487, intron 1 of 10) 4207 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-2 chr15 37677377 37677759 + 0.804350088532826 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) 3006 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-13 chr5 12638842 12639094 + 0.804350088532826 NA Intergenic Intergenic 255802 NM_028882 108151 Mm.89313 NM_028882 ENSMUSG00000040254 Sema3d 4631426B19Rik sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-33 chr8 86859425 86859675 + 0.804350088532826 NA intron (NM_030563, intron 2 of 6) intron (NM_030563, intron 2 of 6) 25708 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-24 chr2 32150675 32151016 + 0.804350088532826 NA promoter-TSS (NM_001159634) promoter-TSS (NM_001159634) -303 NM_172661 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-30 chr6 4902760 4903162 + 0.804350088532826 NA promoter-TSS (NM_181595) promoter-TSS (NM_181595) -359 NM_181595 243725 Mm.332901 NM_181595 ENSMUSG00000032827 Ppp1r9a 2810430P21Rik|4930518N04Rik|5330407E15|A230094E16Rik|BB181831|NRB|mKIAA1222|neurabin-I protein phosphatase 1, regulatory (inhibitor) subunit 9A protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-9 chr11 104641271 104641671 + 0.804350088532826 NA intron (NM_016780, intron 8 of 14) RMER17A2|LTR|ERVK 33471 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-17 chr15 53621808 53622142 + 0.804350088532826 NA intron (NM_177225, intron 4 of 4) intron (NM_177225, intron 4 of 4) -7696 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-10 chr7 74278619 74278873 + 0.804350088532826 NA intron (NM_001038643, intron 10 of 10) intron (NM_001038643, intron 10 of 10) -265064 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-5 chr17 72962190 72962497 + 0.804350088532826 NA Intergenic Intergenic 44038 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-7 chr2 72291857 72292094 + 0.804350088532826 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 6274 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-9 chr6 31518010 31518365 + 0.804350088532826 NA Intergenic Intergenic 45750 NM_013723 27205 Mm.89918 NM_013723 ENSMUSG00000025608 Podxl AW121214|Ly102|PC|PCLP-1|Pclp1|Podxl1 podocalyxin-like protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826 chr1 43092130 43092403 + 0.804350088532826 NA intron (NM_001013025, intron 2 of 12) CpG 220 NM_001357299 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-7 chr11 60538933 60539320 + 0.804350088532826 NA exon (NM_172943, exon 1 of 4) exon (NM_172943, exon 1 of 4) 1443 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-8 chr5 30950570 30950832 + 0.804350088532826 NA TTS (NM_016703) TTS (NM_016703) 595 NM_021304 57742 Mm.389615 NM_021304 ENSMUSG00000006638 Abhd1 LABH-1|LABH1 abhydrolase domain containing 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-16 chr14 56667579 56668068 + 0.804350088532826 NA promoter-TSS (NM_023773) promoter-TSS (NM_023773) -425 NR_153396 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-15 chr8 26981197 26981431 + 0.804350088532826 NA 3' UTR (NM_001101502, exon 2 of 2) 3' UTR (NM_001101502, exon 2 of 2) 3978 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-3 chr1 155235187 155235524 + 0.804350088532826 NA Intergenic Intergenic 76652 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-11 chr7 82335506 82335767 + 0.804350088532826 NA promoter-TSS (NM_001190374) promoter-TSS (NM_001190374) -58 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-32 chr8 76991606 76992024 + 0.804350088532826 NA intron (NM_001083906, intron 2 of 8) intron (NM_001083906, intron 2 of 8) 89307 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-4 chr12 111943415 111943623 + 0.804350088532826 NA intron (NR_029464, intron 2 of 2) intron (NR_029464, intron 2 of 2) 963 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826 chr11 100319295 100319638 + 0.804350088532826 NA promoter-TSS (NM_011508) promoter-TSS (NM_011508) -483 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-10 chr3 66007932 66008394 + 0.804350088532826 NA Intergenic Intergenic -49914 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-35 chr9 63715973 63716192 + 0.804350088532826 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 41912 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-13 chr8 89037783 89038008 + 0.804350088532826 NA intron (NM_021390, intron 2 of 3) intron (NM_021390, intron 2 of 3) 6267 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-21 chr17 81008319 81008583 + 0.804350088532826 NA Intergenic Intergenic 56634 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-6 chr19 4466378 4466608 + 0.804350088532826 NA intron (NM_134164, intron 2 of 7) intron (NM_134164, intron 2 of 7) 10650 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826 chr10 93307558 93307840 + 0.804350088532826 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 3460 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-19 chr16 57552232 57552658 + 0.804350088532826 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 3203 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_11_18_-0.92999688742509_3.78292906973104_0.804350088532826 chr10 78399635 78399927 + 0.804350088532826 NA TTS (NM_010925) TTS (NM_010925) 8764 NR_105872 102465547 NR_105872 ENSMUSG00000098376 Mir6907 Gm27351|mmu-mir-6907 microRNA 6907 ncRNA unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-9 chr3 53125784 53126168 + 0.804350088532826 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 84429 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-29 chr5 129908699 129908973 + 0.804350088532826 NA exon (NM_026916, exon 1 of 3) exon (NM_026916, exon 1 of 3) 296 NM_026916 69034 Mm.211372 NM_026916 ENSMUSG00000095789 Nupr1l 1810010E01Rik|4930579G22Rik|Nupr2 nuclear protein transcriptional regulator 1 like protein-coding common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826-4 chr14 102982385 102982635 + 0.804350088532826 NA TTS (NR_039592) TTS (NR_039592) 122 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-7 chr19 6133612 6133960 + 0.804350088532826 NA TTS (NM_019722) TTS (NM_019722) -5571 NM_026912 69024 Mm.329629 NM_026912 ENSMUSG00000024787 Snx15 1500032B08Rik|E130013C21Rik sorting nexin 15 protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-14 chr9 64067810 64068266 + 0.804350088532826 NA Intergenic Intergenic -12723 NR_040743 76814 Mm.243771 NR_040743 Scarletltr 2600006L11Rik Scarletltr, erythroid developmental long intergenic non-protein coding transcript ncRNA unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-5 chr11 4188959 4189351 + 0.804350088532826 NA intron (NM_134023, intron 1 of 8) intron (NM_134023, intron 1 of 8) 2322 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-34 chr8 126565262 126565648 + 0.804350088532826 NA Intergenic Intergenic 27981 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-23 chr19 5072228 5072454 + 0.804350088532826 NA Intergenic Intergenic 4263 NM_054042 70445 Mm.29597 NM_054042 ENSMUSG00000056481 Cd248 2610111G01Rik|AI842296|Cd164l1|Tem1 CD248 antigen, endosialin protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-4 chr15 77246252 77246690 + 0.804350088532826 NA promoter-TSS (NM_001358770) promoter-TSS (NM_001358770) -863 NM_001358770 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-8 chr11 69419711 69420083 + 0.804350088532826 NA TTS (NM_001081330) TTS (NM_001081330) -6222 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-15 chrX 20961797 20961987 + 0.804350088532826 NA promoter-TSS (NM_013840) promoter-TSS (NM_013840) 86 NM_013840 22294 Mm.34779 NM_013840 ENSMUSG00000001134 Uxt 0910002B17Rik ubiquitously expressed transcript protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-11 chr8 77422648 77422917 + 0.804350088532826 NA intron (NM_030113, intron 5 of 22) intron (NM_030113, intron 5 of 22) -94274 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-28 chr4 133013311 133013706 + 0.804350088532826 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 2002 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-9 chr6 55444032 55444475 + 0.804350088532826 NA Intergenic Intergenic -7725 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-12 chr3 121639159 121639483 + 0.804350088532826 NA intron (NR_036458, intron 2 of 2) GA-rich|Low_complexity|Low_complexity 4164 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-4 chr12 76594327 76594673 + 0.804350088532826 NA intron (NM_013675, intron 32 of 35) intron (NM_013675, intron 32 of 35) -46575 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-16 chr9 78506649 78506880 + 0.804350088532826 NA Intergenic Intergenic -25040 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-2 chr1 89132928 89133146 + 0.804350088532826 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 62622 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-5 chr13 48261989 48262365 + 0.804350088532826 NA non-coding (NR_102303, exon 1 of 3) non-coding (NR_102303, exon 1 of 3) 446 NR_102303 320614 Mm.173009 NR_102303 ENSMUSG00000097622 A330033J07Rik - RIKEN cDNA A330033J07 gene ncRNA unique_peak1_21_10_0.726798763533007_3.8228310004038_0.804350088532826-10 chr11 116808715 116809130 + 0.804350088532826 NA intron (NM_001347633, intron 4 of 4) intron (NM_001347633, intron 4 of 4) 19124 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak2_21_10_0.726798763533007_3.8228310004038_0.804350088532826-7 chr9 49796435 49796663 + 0.804350088532826 NA intron (NM_010875, intron 1 of 15) intron (NM_010875, intron 1 of 15) 2520 NM_001113204 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_11_18_-0.92999688742509_3.78292906973104_0.804350088532826-6 chr2 66124393 66124703 + 0.804350088532826 NA 5' UTR (NM_015736, exon 1 of 11) 5' UTR (NM_015736, exon 1 of 11) 245 NM_015736 14425 Mm.439760 NM_015736 ENSMUSG00000026994 Galnt3 - polypeptide N-acetylgalactosaminyltransferase 3 protein-coding common_peak1_346_247_0.183320000559359_8.04585631066655_0.804243196494112 chr7 49246206 49248592 + 0.804243196494112 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 1210 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_176_171_-0.253083046725209_7.29972323133949_0.80418792486823 chr14 34501736 34503633 + 0.80418792486823 NA promoter-TSS (NM_009758) promoter-TSS (NM_009758) -138 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5 bone morphogenetic protein receptor, type 1A protein-coding common_peak1_153_103_0.273339754456853_6.83710959536952_0.803496376327027-3 chr6 125349261 125350876 + 0.803496376327027 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 345 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_153_103_0.273339754456853_6.83710959536952_0.803496376327027-2 chr6 52239609 52241339 + 0.803496376327027 NA 5' UTR (NM_001122950, exon 1 of 2) 5' UTR (NM_001122950, exon 1 of 2) 380 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding common_peak1_153_103_0.273339754456853_6.83710959536952_0.803496376327027 chr17 74294152 74296084 + 0.803496376327027 NA promoter-TSS (NM_133771) promoter-TSS (NM_133771) -255 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak2_129_85_0.304820359360406_6.5786749343823_0.803416426948908 chr19 8756608 8757539 + 0.803416426948908 NA promoter-TSS (NM_001276704) promoter-TSS (NM_001276704) -30 NM_016813 53319 Mm.7271 NM_016813 ENSMUSG00000010097 Nxf1 Mex67|Mvb1|Tap nuclear RNA export factor 1 protein-coding common_peak2_181_123_0.25889095449588_7.08364178763481_0.802543579138544 chr10 79852919 79854287 + 0.802543579138544 NA promoter-TSS (NM_008956) promoter-TSS (NM_008956) -829 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding common_peak1_141_94_0.28771015380254_6.71371068523222_0.802422179671239 chr11 98935993 98937241 + 0.802422179671239 NA Intergenic Intergenic -1079 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_141_94_0.28771015380254_6.71371068523222_0.802422179671239-2 chr4 11155266 11156283 + 0.802422179671239 NA promoter-TSS (NM_021897) promoter-TSS (NM_021897) -667 NM_001199105 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap|p53DINP1 transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak1_225_156_0.22864697319538_7.40894423548932_0.802313504101548 chr16 84834322 84836411 + 0.802313504101548 NA promoter-TSS (NM_001302216) promoter-TSS (NM_001302216) 242 NM_008065 14390 Mm.18974 NM_008065 ENSMUSG00000008976 Gabpa GABPalpha GA repeat binding protein, alpha protein-coding common_peak2_491_442_-0.153477677873614_8.71442404961821_0.801731799053798 chr5 32135883 32139937 + 0.801731799053798 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 1438 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_106_69_0.322883020084192_6.29072452698706_0.801556296744837 chr10 17574964 17575868 + 0.801556296744837 NA Intergenic Intergenic -147812 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_83_88_-0.370253714520262_6.29060657370627_0.801556296744837 chr11 48978720 48979686 + 0.801556296744837 NA intron (NM_173434, intron 1 of 2) intron (NM_173434, intron 1 of 2) 178 NM_001114679 667214 Mm.441306 NM_001114679 ENSMUSG00000069893 9930111J21Rik1 9930111J21Rik|Iigp RIKEN cDNA 9930111J21 gene 1 protein-coding common_peak2_83_88_-0.370253714520262_6.29060657370627_0.801556296744837-2 chr12 8771980 8773045 + 0.801556296744837 NA intron (NM_011519, intron 1 of 4) CpG 1116 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak1_106_69_0.322883020084192_6.29072452698706_0.801556296744837-2 chr9 8003603 8004544 + 0.801556296744837 NA intron (NM_009534, intron 1 of 7) CpG 523 NM_009534 22601 Mm.221992 NM_009534 ENSMUSG00000053110 Yap1 AI325207|Yap|Yap65|Yki|Yorkie yes-associated protein 1 protein-coding common_peak2_177_172_-0.253375980810041_7.3079402372317_0.801005690288562 chr5 146690995 146693331 + 0.801005690288562 NA Intergenic Intergenic 102793 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_25_32_-0.61885594490334_4.73496614690678_0.800403172662453 chr1 135759447 135759651 + 0.800403172662453 NA Intergenic Intergenic -6536 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-7 chr9 14632144 14632539 + 0.800403172662453 NA Intergenic Intergenic -17341 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-2 chr10 19465180 19465653 + 0.800403172662453 NA Intergenic Intergenic -21299 NR_152784 102635880 Mm.331974 NR_152784 ENSMUSG00000110902 Gm33104 - predicted gene, 33104 ncRNA common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-2 chr1 134086779 134087087 + 0.800403172662453 NA Intergenic Intergenic -7778 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453 chr1 75191528 75191962 + 0.800403172662453 NA promoter-TSS (NM_026187) promoter-TSS (NM_026187) 265 NM_001003917 245860 Mm.238266 NM_001003917 ENSMUSG00000033124 Atg9a AU019532|Apg9l1|Atg9|Atg9l1 autophagy related 9A protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-6 chr3 151299246 151299651 + 0.800403172662453 NA Intergenic Intergenic -138434 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-2 chr15 84280497 84280787 + 0.800403172662453 NA intron (NM_133167, intron 3 of 12) intron (NM_133167, intron 3 of 12) -44078 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding unique_peak2_25_32_-0.61885594490334_4.73496614690678_0.800403172662453 chr17 69221630 69222350 + 0.800403172662453 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 55216 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA unique_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453 chr8 49390402 49390939 + 0.800403172662453 NA Intergenic Intergenic -715980 NM_011857 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak1_24_32_-0.675040277632902_4.706873980542_0.800403172662453-3 chr2 131422992 131423377 + 0.800403172662453 NA Intergenic Intergenic -68678 NM_001177834 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453 chr11 87577534 87577883 + 0.800403172662453 NA promoter-TSS (NM_001361936) promoter-TSS (NM_001361936) -681 NM_001361936 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|Pnutl2 septin 4 protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-5 chr19 29806805 29807222 + 0.800403172662453 NA Intergenic Intergenic -1004 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding common_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453-3 chr5 108268370 108268733 + 0.800403172662453 NA promoter-TSS (NM_026106) promoter-TSS (NM_026106) -346 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding common_peak2_25_32_-0.61885594490334_4.73496614690678_0.800403172662453-3 chr2 27843148 27843684 + 0.800403172662453 NA Intergenic Intergenic -43009 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding unique_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453 chr11 103030114 103030705 + 0.800403172662453 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 1866 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453-2 chr10 77507384 77507911 + 0.800403172662453 NA intron (NM_133998, intron 2 of 5) intron (NM_133998, intron 2 of 5) 8166 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-8 chr9 58253339 58253644 + 0.800403172662453 NA intron (NR_028146, intron 1 of 7) intron (NR_028146, intron 1 of 7) 327 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding common_peak2_25_32_-0.61885594490334_4.73496614690678_0.800403172662453 chr10 7211008 7211632 + 0.800403172662453 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 917 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-10 chr4 89386257 89386918 + 0.800403172662453 NA intron (NR_132431, intron 3 of 9) intron (NR_132431, intron 3 of 9) -75555 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_24_32_-0.675040277632902_4.706873980542_0.800403172662453 chr11 101095519 101095940 + 0.800403172662453 NA promoter-TSS (NM_008949) promoter-TSS (NM_008949) -294 NM_008949 19183 Mm.18344 NM_008949 ENSMUSG00000019303 Psmc3ip C79099|GT198|HOP2|Tbpip proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-11 chr7 109609258 109609772 + 0.800403172662453 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 7053 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-5 chrX 150587444 150588003 + 0.800403172662453 NA intron (NM_029943, intron 1 of 5) intron (NM_029943, intron 1 of 5) 432 NM_029943 77622 Mm.440275 NM_029943 ENSMUSG00000025269 Apex2 C430040P13Rik|ape2 apurinic/apyrimidinic endonuclease 2 protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-3 chr11 103050747 103051018 + 0.800403172662453 NA intron (NM_008707, intron 3 of 11) intron (NM_008707, intron 3 of 11) 22339 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak1_24_32_-0.675040277632902_4.706873980542_0.800403172662453-2 chr13 97539285 97539719 + 0.800403172662453 NA Intergenic Intergenic -20498 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-12 chr9 67071160 67071497 + 0.800403172662453 NA Intergenic Intergenic -22115 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_25_32_-0.61885594490334_4.73496614690678_0.800403172662453-5 chr9 100546372 100546709 + 0.800403172662453 NA promoter-TSS (NM_010878) promoter-TSS (NM_010878) -406 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding unique_peak1_25_32_-0.61885594490334_4.73496614690678_0.800403172662453 chr18 24752807 24753571 + 0.800403172662453 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 44566 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453-4 chr7 19149817 19150300 + 0.800403172662453 NA promoter-TSS (NM_026111) promoter-TSS (NM_026111) 220 NM_026943 107686 Mm.29135 NM_026943 ENSMUSG00000040824 Snrpd2 1810009A06Rik|SMD2 small nuclear ribonucleoprotein D2 protein-coding common_peak2_25_32_-0.61885594490334_4.73496614690678_0.800403172662453-2 chr10 111619406 111619814 + 0.800403172662453 NA Intergenic Intergenic -25337 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-5 chr14 117929982 117930397 + 0.800403172662453 NA intron (NM_001079844, intron 7 of 9) intron (NM_001079844, intron 7 of 9) 23658 NR_105747 102465148 NR_105747 ENSMUSG00000098648 Mir6239 Gm28025|mmu-mir-6239 microRNA 6239 ncRNA unique_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-3 chr2 120027575 120028073 + 0.800403172662453 NA TTS (NM_011941) TTS (NM_011941) 341 NM_001114637 433466 Mm.482417 NM_001114637 ENSMUSG00000098789 Jmjd7 - jumonji domain containing 7 protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-6 chr16 24911108 24911554 + 0.800403172662453 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -148308 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-4 chr14 30634913 30635567 + 0.800403172662453 NA Intergenic Intergenic -9032 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453 chr1 82794250 82794756 + 0.800403172662453 NA Intergenic Intergenic -26047 NM_025453 66261 Mm.46325 NM_025453 ENSMUSG00000026149 Tm4sf20 1810018L02Rik transmembrane 4 L six family member 20 protein-coding common_peak1_25_32_-0.61885594490334_4.73496614690678_0.800403172662453-2 chr8 33897470 33897857 + 0.800403172662453 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 32200 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-9 chr3 116007725 116008080 + 0.800403172662453 NA promoter-TSS (NM_023214) promoter-TSS (NM_023214) -395 NM_001163514 58193 Mm.41739 NM_021388 ENSMUSG00000027963 Extl2 3000001D04Rik|AW146439 exostoses (multiple)-like 2 protein-coding unique_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453 chr1 186567381 186568093 + 0.800403172662453 NA Intergenic Intergenic -9056 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-4 chr4 149586778 149587625 + 0.800403172662453 NA intron (NM_023051, intron 1 of 18) CpG 733 NM_023051 65945 Mm.38993 NM_023051 ENSMUSG00000039953 Clstn1 1810034E21Rik|Cst-1|Cstn1 calsyntenin 1 protein-coding common_peak2_38_21_0.546942158045272_4.73290269765993_0.800403172662453-4 chr11 120466675 120467044 + 0.800403172662453 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 741 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-7 chr17 21516726 21517306 + 0.800403172662453 NA Intergenic Intergenic -18523 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453-2 chr13 104037065 104037533 + 0.800403172662453 NA exon (NM_029447, exon 10 of 13) exon (NM_029447, exon 10 of 13) 72315 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding unique_peak1_24_32_-0.675040277632902_4.706873980542_0.800403172662453 chrX 36902781 36903323 + 0.800403172662453 NA promoter-TSS (NM_029891) promoter-TSS (NM_029891) -153 NM_029891 77286 Mm.21649 NM_029891 ENSMUSG00000044149 Nkrf 9430034D17Rik|AW124770|C80287 NF-kappaB repressing factor protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-3 chr11 4297495 4297781 + 0.800403172662453 NA Intergenic Intergenic 30842 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_25_32_-0.61885594490334_4.73496614690678_0.800403172662453-4 chr3 65975026 65975455 + 0.800403172662453 NA Intergenic Intergenic -16991 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_38_21_0.546942158045272_4.73290269765993_0.800403172662453-8 chr2 80581319 80581737 + 0.800403172662453 NA promoter-TSS (NM_001355410) promoter-TSS (NM_001355410) -346 NM_001355410 50884 Mm.25203 NM_016965 ENSMUSG00000027002 Nckap1 C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1 NCK-associated protein 1 protein-coding unique_peak2_24_32_-0.675040277632902_4.706873980542_0.800403172662453-3 chr15 101373983 101374521 + 0.800403172662453 NA Intergenic Intergenic -4127 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_221_211_-0.230234070424791_7.6128034193508_0.800070143061146 chr8 94981063 94984280 + 0.800070143061146 NA intron (NM_001198894, intron 1 of 13) intron (NM_001198894, intron 1 of 13) -1728 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak2_565_505_-0.144590746459134_8.91069820146474_0.799336194847175 chr8 84975812 84978672 + 0.799336194847175 NA 3' UTR (NM_008416, exon 1 of 1) 3' UTR (NM_008416, exon 1 of 1) 1506 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_206_198_-0.23915509386573_7.51704707361078_0.799153575322273 chr5 64805261 64807418 + 0.799153575322273 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 2816 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_155_104_0.278018299869958_6.8532546676011_0.79913148743799 chr11 116030028 116031524 + 0.79913148743799 NA intron (NM_001286006, intron 1 of 15) intron (NM_001286006, intron 1 of 15) 460 NM_172569 217331 Mm.297706 NM_172569 ENSMUSG00000020770 Unk B230379M23Rik|Unkh|Zc3h5|Zc3hdc5|mKIAA1753 unkempt family zinc finger protein-coding common_peak2_58_64_-0.422966727705774_5.81088444917557_0.799068699966534 chr1 87180275 87180843 + 0.799068699966534 NA Intergenic Intergenic -2755 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding common_peak1_77_48_0.384608952994116_5.80701432061227_0.799068699966534 chr11 83753752 83754404 + 0.799068699966534 NA intron (NM_145432, intron 1 of 19) intron (NM_145432, intron 1 of 19) 441 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding common_peak1_57_64_-0.447454791651188_5.79864041720286_0.799068699966534 chr5 64230650 64231088 + 0.799068699966534 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 512 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_77_48_0.384608952994116_5.80701432061227_0.799068699966534 chr8 88118840 88119462 + 0.799068699966534 NA promoter-TSS (NR_151771) promoter-TSS (NR_151771) 392 NM_029074 382030 Mm.216574 NM_029074 ENSMUSG00000036810 Cnep1r1 5033428A16Rik|NEP1-R1|Tmem188 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding common_peak2_57_64_-0.447454791651188_5.79864041720286_0.799068699966534-4 chr7 28931257 28932243 + 0.799068699966534 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 30582 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_77_48_0.384608952994116_5.80701432061227_0.799068699966534-3 chr19 5487621 5488286 + 0.799068699966534 NA intron (NR_153769, intron 1 of 14) intron (NR_153769, intron 1 of 14) 426 NM_027877 71711 Mm.27697 NM_027877 ENSMUSG00000024906 Mus81 1200008A18Rik|AI182501|AW045863 MUS81 structure-specific endonuclease subunit protein-coding common_peak1_77_48_0.384608952994116_5.80701432061227_0.799068699966534-2 chr17 47923805 47924679 + 0.799068699966534 NA 5' UTR (NM_001110824, exon 1 of 17) 5' UTR (NM_001110824, exon 1 of 17) 390 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak2_57_64_-0.447454791651188_5.79864041720286_0.799068699966534-3 chr5 64230625 64231130 + 0.799068699966534 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 520 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_57_64_-0.447454791651188_5.79864041720286_0.799068699966534-2 chr2 122117466 122118242 + 0.799068699966534 NA intron (NM_145531, intron 1 of 39) intron (NM_145531, intron 1 of 39) 532 NM_145531 214585 Mm.222303 NM_145531 ENSMUSG00000033396 Spg11 6030465E24Rik|A330015I11|C530005A01Rik SPG11, spatacsin vesicle trafficking associated protein-coding common_peak2_58_64_-0.422966727705774_5.81088444917557_0.799068699966534-2 chr18 74268288 74268939 + 0.799068699966534 NA intron (NM_001357422, intron 1 of 14) intron (NM_001357422, intron 1 of 14) 438 NM_001357422 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak2_57_64_-0.447454791651188_5.79864041720286_0.799068699966534 chr16 44745758 44746402 + 0.799068699966534 NA exon (NM_001356392, exon 1 of 5) exon (NM_001356392, exon 1 of 5) 283 NM_001356392 66067 Mm.34520 NM_025332 ENSMUSG00000022668 Gtpbp8 0610037H22Rik GTP-binding protein 8 (putative) protein-coding common_peak2_77_48_0.384608952994116_5.80701432061227_0.799068699966534-2 chr8 126615323 126615656 + 0.799068699966534 NA Intergenic Intergenic -22053 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-10 chrX 99136305 99136757 + 0.798885335210229 NA 5' UTR (NM_010110, exon 1 of 5) 5' UTR (NM_010110, exon 1 of 5) 470 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-2 chr17 22314499 22314925 + 0.798885335210229 NA intron (NM_001357992, intron 1 of 5) intron (NM_001357992, intron 1 of 5) 130 NM_001357992 631624 Mm.440794 NM_001357991 Gm7072 EG631624 predicted gene 7072 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-7 chr4 32615619 32615884 + 0.798885335210229 NA intron (NM_011997, intron 1 of 10) CpG 281 NM_011997 26885 Mm.22279 NM_011997 ENSMUSG00000028282 Casp8ap2 D4Ertd659e|FLASH caspase 8 associated protein 2 protein-coding common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-5 chr5 150612104 150612382 + 0.798885335210229 NA intron (NM_001362416, intron 6 of 7) intron (NM_001362416, intron 6 of 7) -17718 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-5 chr2 145218801 145219300 + 0.798885335210229 NA intron (NM_001356497, intron 1 of 16) ID4_|SINE|ID -23561 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-6 chr17 27082716 27083075 + 0.798885335210229 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) -8350 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-2 chr11 68693111 68693358 + 0.798885335210229 NA intron (NM_175260, intron 1 of 40) intron (NM_175260, intron 1 of 40) 1319 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding unique_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-4 chr8 71951160 71951600 + 0.798885335210229 NA intron (NM_001164581, intron 1 of 3) intron (NM_001164581, intron 1 of 3) 314 NM_001164581 234413 Mm.334607 NM_001164581 ENSMUSG00000052446 Zfp961 A230105L22Rik|BC065788|mszf37|mszf55-2 zinc finger protein 961 protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-3 chr12 32094742 32095209 + 0.798885335210229 NA Intergenic Intergenic -33696 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding unique_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-5 chr5 150593891 150594443 + 0.798885335210229 NA intron (NM_133898, intron 1 of 4) CpG 358 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding unique_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229 chr1 91458085 91458403 + 0.798885335210229 NA intron (NM_011066, intron 1 of 22) intron (NM_011066, intron 1 of 22) 1084 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229 chr14 20806118 20806394 + 0.798885335210229 NA Intergenic Intergenic 12017 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA common_peak1_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-3 chr4 141545412 141545689 + 0.798885335210229 NA promoter-TSS (NR_030695) promoter-TSS (NR_030695) -612 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-5 chr4 45509629 45510348 + 0.798885335210229 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 20840 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-7 chr7 112696777 112697070 + 0.798885335210229 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 17603 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-2 chr17 45879841 45880151 + 0.798885335210229 NA non-coding (NR_152136, exon 2 of 2) non-coding (NR_152136, exon 2 of 2) 1456 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-4 chr17 32506655 32507172 + 0.798885335210229 NA exon (NM_001101445, exon 2 of 13) exon (NM_001101445, exon 2 of 13) 451 NM_001101445 208285 Mm.311422 NM_001101445 ENSMUSG00000091586 Cyp4f17 EG208285 cytochrome P450, family 4, subfamily f, polypeptide 17 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-9 chr9 102635993 102636371 + 0.798885335210229 NA Intergenic Intergenic 9886 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-3 chr13 55444617 55444873 + 0.798885335210229 NA promoter-TSS (NM_001286063) promoter-TSS (NM_001286063) -327 NM_001286063 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak1_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-2 chr2 102948139 102948340 + 0.798885335210229 NA Intergenic Intergenic -46574 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-7 chr6 89349426 89349813 + 0.798885335210229 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 12994 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-6 chr2 153140456 153141106 + 0.798885335210229 NA intron (NM_001172117, intron 10 of 12) B2_Mm1t|SINE|B2 -20520 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-8 chr5 88675230 88675557 + 0.798885335210229 NA intron (NM_178700, intron 1 of 9) CpG 187 NM_001098476 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229 chr1 193129807 193130074 + 0.798885335210229 NA intron (NM_145415, intron 1 of 11) CpG 311 NM_145415 215193 Mm.173758 NM_145415 ENSMUSG00000016181 Diexf AA408296|AW045375|Def digestive organ expansion factor homolog (zebrafish) protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229 chr1 132321639 132322087 + 0.798885335210229 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 5738 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-4 chr3 31038308 31038659 + 0.798885335210229 NA promoter-TSS (NR_105975) promoter-TSS (NR_105975) -483 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-8 chr4 10973108 10973521 + 0.798885335210229 NA Intergenic Intergenic 34305 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding common_peak1_19_27_-0.75765797908593_4.42852593251464_0.798885335210229 chr16 49858333 49858699 + 0.798885335210229 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 2862 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-11 chr6 145860464 145861118 + 0.798885335210229 NA 3' UTR (NM_024469, exon 5 of 5) 3' UTR (NM_024469, exon 5 of 5) 4629 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-6 chr7 144026694 144026885 + 0.798885335210229 NA Intergenic Intergenic 17535 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-3 chr16 85898823 85899061 + 0.798885335210229 NA intron (NM_011782, intron 1 of 7) intron (NM_011782, intron 1 of 7) 2183 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229 chr1 4857010 4857525 + 0.798885335210229 NA promoter-TSS (NM_011541) promoter-TSS (NM_011541) -427 NM_001159750 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-10 chr6 34476408 34476761 + 0.798885335210229 NA intron (NM_007563, intron 1 of 2) intron (NM_007563, intron 1 of 2) 228 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-5 chr12 84173644 84174274 + 0.798885335210229 NA exon (NM_001163502, exon 2 of 13) exon (NM_001163502, exon 2 of 13) 20056 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-2 chr15 66887797 66888092 + 0.798885335210229 NA Intergenic Intergenic -3449 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-2 chr10 108184917 108185377 + 0.798885335210229 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 22747 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_32_17_0.597140982955446_4.46849549292004_0.798885335210229 chr10 12695128 12695538 + 0.798885335210229 NA intron (NM_011682, intron 24 of 73) intron (NM_011682, intron 24 of 73) 166402 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-4 chr17 80726167 80726475 + 0.798885335210229 NA intron (NM_001360278, intron 1 of 33) intron (NM_001360278, intron 1 of 33) 1704 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229 chr1 180331628 180332113 + 0.798885335210229 NA intron (NM_001081175, intron 1 of 7) CpG -1321 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_32_17_0.597140982955446_4.46849549292004_0.798885335210229-2 chr6 34709917 34710378 + 0.798885335210229 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 703 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-6 chr6 121099420 121099843 + 0.798885335210229 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -18004 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229 chr15 71850901 71851130 + 0.798885335210229 NA intron (NM_027174, intron 46 of 63) intron (NM_027174, intron 46 of 63) -123177 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-2 chr16 8665397 8665944 + 0.798885335210229 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 6483 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-8 chr7 126629282 126629637 + 0.798885335210229 NA Intergenic (CAGA)n|Simple_repeat|Simple_repeat -3989 NM_019738 56312 Mm.18742 NM_019738 ENSMUSG00000030717 Nupr1 2310032H04Rik|Com1|p8 nuclear protein transcription regulator 1 protein-coding common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-4 chr16 38007659 38008090 + 0.798885335210229 NA TTS (NM_153394) TTS (NM_153394) -9449 NR_040565 75175 Mm.399335 NR_040565 4930542C21Rik - RIKEN cDNA 4930542C21 gene ncRNA unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-12 chr9 54644586 54645058 + 0.798885335210229 NA intron (NM_053178, intron 1 of 13) intron (NM_053178, intron 1 of 13) 17063 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak1_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-7 chr9 109055130 109055443 + 0.798885335210229 NA intron (NM_026381, intron 1 of 3) intron (NM_026381, intron 1 of 3) 420 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-3 chr17 87834988 87835425 + 0.798885335210229 NA Intergenic Intergenic -37212 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-7 chr19 29361513 29361789 + 0.798885335210229 NA intron (NM_026362, intron 1 of 5) intron (NM_026362, intron 1 of 5) 220 NM_026362 67759 Mm.275511 NM_026362 ENSMUSG00000016495 Plgrkt 1110007H22Rik|5033414D02Rik|AI852040|Plg-R(KT)|Plg-RKT plasminogen receptor, C-terminal lysine transmembrane protein protein-coding unique_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-4 chr15 97825701 97826033 + 0.798885335210229 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 5900 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-9 chr5 21495982 21496525 + 0.798885335210229 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -47274 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-8 chr8 95149120 95149408 + 0.798885335210229 NA Intergenic Intergenic -6724 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-2 chr1 172242089 172242562 + 0.798885335210229 NA intron (NM_013734, intron 11 of 22) intron (NM_013734, intron 11 of 22) 16099 NM_013734 27222 Mm.482392 NM_013734 ENSMUSG00000007107 Atp1a4 - ATPase, Na+/K+ transporting, alpha 4 polypeptide protein-coding unique_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-4 chr12 79504399 79505010 + 0.798885335210229 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 207353 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_20_27_-0.68776524646498_4.46347229882511_0.798885335210229-3 chr15 79409404 79409766 + 0.798885335210229 NA Intergenic Intergenic -6282 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-3 chr17 29451108 29451374 + 0.798885335210229 NA Intergenic Intergenic -39804 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-6 chr2 148672664 148672976 + 0.798885335210229 NA 5' UTR (NM_019761, exon 1 of 2) 5' UTR (NM_019761, exon 1 of 2) 179 NM_001110159 56488 Mm.34663 NM_019761 ENSMUSG00000036992 Nxt1 1110001N02Rik NTF2-related export protein 1 protein-coding unique_peak2_19_27_-0.75765797908593_4.42852593251464_0.798885335210229-3 chr2 20562175 20562956 + 0.798885335210229 NA intron (NM_001177630, intron 2 of 17) intron (NM_001177630, intron 2 of 17) 43052 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding common_peak1_32_17_0.597140982955446_4.46849549292004_0.798885335210229-5 chr2 6548680 6549122 + 0.798885335210229 NA intron (NM_001310447, intron 10 of 11) intron (NM_001310447, intron 10 of 11) 172761 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_151_149_-0.273765195097222_7.09193609294727_0.798859123350393 chr14 31669413 31670681 + 0.798859123350393 NA Intergenic Intergenic 28990 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak2_104_107_-0.329750886963454_6.59001205868174_0.798189539576214 chr11 69580446 69581549 + 0.798189539576214 NA intron (NM_001127233, intron 1 of 10) intron (NM_001127233, intron 1 of 10) 638 NM_001127233 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding common_peak1_104_107_-0.329750886963454_6.59001205868174_0.798189539576214 chr17 56673333 56674236 + 0.798189539576214 NA intron (NM_001252467, intron 1 of 13) CpG 559 NM_027933 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak2_60_36_0.437702703673926_5.42830471746591_0.798133060242836 chr2 128686888 128687323 + 0.798133060242836 NA intron (NM_008569, intron 1 of 47) CpG 290 NM_008569 17222 Mm.277408 NM_008569 ENSMUSG00000014355 Anapc1 2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24 anaphase promoting complex subunit 1 protein-coding common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836-7 chr9 122178964 122179986 + 0.798133060242836 NA intron (NM_001271873, intron 12 of 12) intron (NM_001271873, intron 12 of 12) 62016 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836-2 chr15 81857652 81858192 + 0.798133060242836 NA intron (NM_020507, intron 1 of 1) CpG 404 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836 chr11 43895590 43896415 + 0.798133060242836 NA intron (NM_001284381, intron 1 of 4) ORR1F|LTR|ERVL-MaLR 5235 NM_001284380 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak1_60_36_0.437702703673926_5.42830471746591_0.798133060242836-2 chr17 56934905 56935390 + 0.798133060242836 NA intron (NM_022328, intron 1 of 11) CpG 241 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836-3 chr16 24397685 24398746 + 0.798133060242836 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -4560 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836-4 chr8 107031351 107031693 + 0.798133060242836 NA intron (NM_126165, intron 1 of 10) CpG 196 NM_126165 116733 Mm.236004 NM_126165 ENSMUSG00000031913 Vps4a 4930589C15Rik|AI325971|AW553189 vacuolar protein sorting 4A protein-coding common_peak2_60_36_0.437702703673926_5.42830471746591_0.798133060242836-2 chr3 60408368 60408970 + 0.798133060242836 NA Intergenic Intergenic -64161 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836-5 chr9 50886660 50887387 + 0.798133060242836 NA intron (NM_001286553, intron 15 of 16) intron (NM_001286553, intron 15 of 16) 30099 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak1_60_36_0.437702703673926_5.42830471746591_0.798133060242836 chr13 46669225 46670174 + 0.798133060242836 NA exon (NM_001033192, exon 1 of 5) exon (NM_001033192, exon 1 of 5) 177 NM_001033192 97863 Mm.275934 NM_001033192 ENSMUSG00000069237 Fam8a1 C78339 family with sequence similarity 8, member A1 protein-coding common_peak1_60_36_0.437702703673926_5.42830471746591_0.798133060242836 chr16 65819261 65819689 + 0.798133060242836 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 3842 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak2_60_36_0.437702703673926_5.42830471746591_0.798133060242836-3 chr6 30303943 30304484 + 0.798133060242836 NA 5' UTR (NM_001169576, exon 1 of 5) 5' UTR (NM_001169576, exon 1 of 5) 326 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_60_36_0.437702703673926_5.42830471746591_0.798133060242836-3 chr2 13544525 13545089 + 0.798133060242836 NA promoter-TSS (NM_010067) promoter-TSS (NM_010067) -143 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak2_43_50_-0.493249939374435_5.42580037228428_0.798133060242836-6 chr9 78448327 78448777 + 0.798133060242836 NA intron (NM_026658, intron 1 of 11) CpG 342 NM_026658 68291 Mm.291779 NM_026658 ENSMUSG00000032342 Mto1 2310039H01Rik|5730419A02Rik mitochondrial tRNA translation optimization 1 protein-coding common_peak1_43_50_-0.493249939374435_5.42580037228428_0.798133060242836 chr17 75551378 75551801 + 0.798133060242836 NA intron (NM_001357860, intron 1 of 6) CpG 357 NM_133747 72722 Mm.24641 NM_133747 ENSMUSG00000002017 Fam98a 2810405J04Rik|AL024114 family with sequence similarity 98, member A protein-coding common_peak2_212_146_0.238729019524578_7.31903685459865_0.797863503042603 chr3 144718589 144720221 + 0.797863503042603 NA intron (NM_001282037, intron 1 of 10) intron (NM_001282037, intron 1 of 10) 930 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_212_146_0.238729019524578_7.31903685459865_0.797863503042603 chr3 57576083 57577054 + 0.797863503042603 NA promoter-TSS (NM_001168281) promoter-TSS (NM_001168281) -658 NM_001168281 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_74_80_-0.396715538504862_6.14149223363219_0.797828185802494 chr1 89070459 89071314 + 0.797828185802494 NA intron (NM_133816, intron 1 of 5) CpG 471 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_97_62_0.349023240292894_6.15179154364636_0.797828185802482 chr9 75196763 75197691 + 0.797828185802482 NA intron (NM_010864, intron 32 of 40) intron (NM_010864, intron 32 of 40) -34787 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding common_peak1_142_95_0.282656052539977_6.72629052699114_0.797674886274166 chr2 4881453 4882601 + 0.797674886274166 NA intron (NM_175400, intron 1 of 8) CpG 463 NM_175400 109079 Mm.34329 NM_175400 ENSMUSG00000026662 Sephs1 1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding common_peak2_115_117_-0.31478500755782_6.72525054558293_0.797674886274141-3 chr8 36659692 36660434 + 0.797674886274141 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -46120 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_115_117_-0.31478500755782_6.72525054558293_0.797674886274141 chr11 16753830 16756006 + 0.797674886274141 NA intron (NM_207655, intron 1 of 27) MIRc|SINE|MIR 2715 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_115_117_-0.31478500755782_6.72525054558293_0.797674886274141-2 chr15 99701996 99702941 + 0.797674886274141 NA exon (NM_031842, exon 1 of 13) exon (NM_031842, exon 1 of 13) 181 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding common_peak1_196_135_0.239075520824336_7.20700060166251_0.79758702671026 chr11 59307031 59309096 + 0.79758702671026 NA intron (NM_139298, intron 1 of 3) intron (NM_139298, intron 1 of 3) 1133 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding common_peak2_165_161_-0.25858136156695_7.21055932210115_0.79758702671026 chr2 129800742 129802175 + 0.79758702671026 NA promoter-TSS (NR_029452) promoter-TSS (NR_029452) 1 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA common_peak1_66_72_-0.40827154123963_5.9856887882602_0.796654548817852 chr17 84188181 84189189 + 0.796654548817852 NA promoter-TSS (NM_001001806) promoter-TSS (NM_001001806) -738 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_87_55_0.364765500966212_5.98973767254071_0.796654548817852-2 chr11 61493336 61494138 + 0.796654548817852 NA exon (NM_001291034, exon 1 of 6) exon (NM_001291034, exon 1 of 6) 524 NM_001361989 23939 Mm.38172 NM_011841 ENSMUSG00000001034 Mapk7 BMK-1|BMK1|ERK-5|ERK5|Erk5-T|PRKM7|b2b2346Clo mitogen-activated protein kinase 7 protein-coding common_peak1_87_55_0.364765500966212_5.98973767254071_0.796654548817852 chr1 135770027 135771085 + 0.796654548817852 NA Intergenic Intergenic 4471 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak2_66_72_-0.40827154123963_5.9856887882602_0.796654548817852-2 chr6 56797800 56798558 + 0.796654548817852 NA promoter-TSS (NM_145958) promoter-TSS (NM_145958) -366 NM_001362213 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_66_72_-0.40827154123963_5.9856887882602_0.796654548817852 chr1 66700374 66701733 + 0.796654548817852 NA intron (NM_025683, intron 1 of 5) CpG 222 NM_001310644 66646 Mm.240912 NM_025683 ENSMUSG00000026005 Rpe 2810429B02Rik|5730518J08Rik ribulose-5-phosphate-3-epimerase protein-coding common_peak1_227_158_0.223006142341758_7.42438602645523_0.796471622798434 chr13 52657843 52660120 + 0.796471622798434 NA Intergenic Intergenic 62099 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_68_42_0.397424149321611_5.6249768293629_0.796452271284518-4 chr9 107699768 107700408 + 0.796452271284518 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 5503 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_68_42_0.397424149321611_5.6249768293629_0.796452271284518 chr1 181741783 181742647 + 0.796452271284518 NA Intergenic Intergenic 100186 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_50_57_-0.467314535563665_5.62432372734574_0.796452271284518 chr1 182409166 182409911 + 0.796452271284518 NA intron (NM_173378, intron 1 of 17) CpG 371 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak1_69_42_0.418036258270461_5.63528288383733_0.796452271284518 chr11 82764387 82765083 + 0.796452271284518 NA promoter-TSS (NM_001291242) promoter-TSS (NM_001291242) 390 NM_025884 66983 Mm.29622 NM_025884 ENSMUSG00000046010 Zfp830 2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830 zinc finger protein 830 protein-coding common_peak1_69_42_0.418036258270461_5.63528288383733_0.796452271284518-2 chr12 5176098 5176758 + 0.796452271284518 NA intron (NM_001164493, intron 3 of 13) intron (NM_001164493, intron 3 of 13) 199254 NM_001164493 208439 Mm.388281 NM_001164493 ENSMUSG00000020627 Klhl29 A230106N14Rik|Gm68|Kbtbd9|mKIAA1921 kelch-like 29 protein-coding common_peak2_68_42_0.397424149321611_5.6249768293629_0.796452271284518 chr11 69324029 69324643 + 0.796452271284518 NA promoter-TSS (NM_172560) promoter-TSS (NM_172560) 350 NM_001024206 245828 Mm.28073 NM_001024206 ENSMUSG00000049299 Trappc1 BET5|D11Ertd172e|MUM2 trafficking protein particle complex 1 protein-coding common_peak2_50_57_-0.467314535563665_5.62432372734574_0.796452271284518-4 chr9 21002662 21003473 + 0.796452271284518 NA intron (NM_001357899, intron 1 of 8) CpG 330 NM_001357899 66163 Mm.427576 NM_023167 ENSMUSG00000003299 Mrpl4 1110017G11Rik mitochondrial ribosomal protein L4 protein-coding common_peak2_50_57_-0.467314535563665_5.62432372734574_0.796452271284518-3 chr16 32672638 32673255 + 0.796452271284518 NA promoter-TSS (NM_001347185) promoter-TSS (NM_001347185) -208 NM_001347185 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_50_57_-0.467314535563665_5.62432372734574_0.796452271284518 chr11 53519625 53520449 + 0.796452271284518 NA promoter-TSS (NM_001361969) promoter-TSS (NM_001361969) -151 NM_001361969 20362 Mm.274399 NM_033144 ENSMUSG00000018398 Sept8 AW046166|Sepl septin 8 protein-coding common_peak1_68_42_0.397424149321611_5.6249768293629_0.796452271284518-2 chr10 34417946 34418480 + 0.796452271284518 NA intron (NM_176968, intron 1 of 11) intron (NM_176968, intron 1 of 11) 338 NM_176968 319638 Mm.73467 NM_176968 ENSMUSG00000039480 Nt5dc1 6030401B09Rik|AW987726|Nt5c2l1 5'-nucleotidase domain containing 1 protein-coding common_peak2_50_57_-0.467314535563665_5.62432372734574_0.796452271284518-2 chr13 55105308 55105804 + 0.796452271284518 NA intron (NM_012017, intron 1 of 6) CpG 247 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding common_peak2_69_42_0.418036258270461_5.63528288383733_0.796452271284518 chr7 13041599 13042140 + 0.796452271284518 NA TTS (NM_001290453) TTS (NM_001290453) -3594 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak1_50_57_-0.467314535563665_5.62432372734574_0.796452271284518-3 chr3 95675090 95675523 + 0.796452271284518 NA TTS (NM_144899) TTS (NM_144899) 12611 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_68_42_0.397424149321611_5.6249768293629_0.796452271284518-3 chr18 60717766 60718634 + 0.796452271284518 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 9366 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_50_57_-0.467314535563665_5.62432372734574_0.796452271284518-2 chr11 120098939 120099510 + 0.796452271284518 NA promoter-TSS (NM_183137) promoter-TSS (NM_183137) 290 NM_001110242 208501 Mm.46699 NM_001110242 ENSMUSG00000078572 Ndufaf8 1810043H04Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 8 protein-coding common_peak2_119_78_0.312641837875538_6.46010166711487_0.795614124956299 chr7 16614338 16615128 + 0.795614124956299 NA 5' UTR (NM_172739, exon 1 of 7) 5' UTR (NM_172739, exon 1 of 7) 260 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak2_94_98_-0.347591246353828_6.4555609969027_0.795614124956299 chr10 77164756 77166441 + 0.795614124956299 NA intron (NM_009929, intron 2 of 41) CpG 932 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_84_89_-0.369420319812589_6.30714293642338_0.795229931680411 chr2 26444456 26445172 + 0.795229931680411 NA intron (NM_153125, intron 1 of 29) intron (NM_153125, intron 1 of 29) 402 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak2_85_89_-0.352665545693486_6.31552032348293_0.795229931680411 chr7 138845787 138847130 + 0.795229931680411 NA promoter-TSS (NM_026391) promoter-TSS (NM_026391) 72 NM_026391 52432 Mm.258739 NM_026391 ENSMUSG00000041769 Ppp2r2d 1300017E19Rik|D7Ertd753e|MDS026 protein phosphatase 2, regulatory subunit B, delta protein-coding common_peak1_108_70_0.328947765623764_6.31422100231656_0.795229931680411 chr2 23068292 23069447 + 0.795229931680411 NA promoter-TSS (NM_001102438) promoter-TSS (NM_001102438) -203 NM_001102437 74159 Mm.181973 NM_028793 ENSMUSG00000026781 Acbd5 1300014E15Rik acyl-Coenzyme A binding domain containing 5 protein-coding common_peak2_156_105_0.273496856461207_6.8646688827938_0.794841903579885 chr19 59465044 59466809 + 0.794841903579885 NA TTS (NM_010132) TTS (NM_010132) 7236 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak2_213_147_0.235657691826965_7.32728221154243_0.794760610992205 chr10 72654874 72656133 + 0.794760610992205 NA intron (NM_001293683, intron 1 of 7) intron (NM_001293683, intron 1 of 7) 657 NM_001293683 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak1_170_115_0.265798684299241_6.99088033727719_0.794193748835505 chr7 128236995 128238390 + 0.794193748835505 NA 5' UTR (NM_146205, exon 1 of 6) 5' UTR (NM_146205, exon 1 of 6) 335 NM_146205 233912 Mm.475117 NM_146205 ENSMUSG00000042178 Armc5 AW049683|BC032200 armadillo repeat containing 5 protein-coding common_peak2_170_115_0.265798684299241_6.99088033727719_0.794193748835505 chr12 112593830 112595574 + 0.794193748835505 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 5918 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_131_87_0.293524406613972_6.60619382194428_0.793070504859675 chr17 65736694 65738687 + 0.793070504859675 NA intron (NM_133685, intron 1 of 6) intron (NM_133685, intron 1 of 6) 35062 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak2_131_87_0.293524406613972_6.60619382194428_0.793070504859675 chr8 121590521 121591472 + 0.793070504859675 NA intron (NM_026160, intron 1 of 3) intron (NM_026160, intron 1 of 3) 528 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak1_105_108_-0.32946924908031_6.60344970023677_0.793070504859626 chr15 11836199 11836888 + 0.793070504859626 NA Intergenic Intergenic 69131 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_143_96_0.277688447339089_6.73875706585667_0.793016804950528 chr10 52417570 52419066 + 0.793016804950528 NA intron (NM_030250, intron 1 of 4) intron (NM_030250, intron 1 of 4) 771 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding common_peak1_143_96_0.277688447339089_6.73875706585667_0.793016804950528 chr15 63399621 63400876 + 0.793016804950528 NA Intergenic Intergenic 79360 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA common_peak1_144_96_0.287602098370774_6.74371389137251_0.793016804950528 chr13 41000298 41001587 + 0.793016804950528 NA promoter-TSS (NM_026550) promoter-TSS (NM_026550) -68 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding common_peak2_143_96_0.277688447339089_6.73875706585667_0.793016804950528-2 chr11 86606579 86607750 + 0.793016804950528 NA intron (NM_001356531, intron 9 of 11) intron (NM_001356531, intron 9 of 11) -23006 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_116_118_-0.314663363971166_6.73748608132236_0.793016804950528 chr11 86604195 86605450 + 0.793016804950528 NA intron (NM_001356531, intron 9 of 11) intron (NM_001356531, intron 9 of 11) -20664 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-3 chr15 101320333 101320883 + 0.792815190339775 NA Intergenic Intergenic 27396 NR_033803 77717 Mm.391998 NR_033803 ENSMUSG00000075408 6030408B16Rik AI225877 RIKEN cDNA 6030408B16 gene ncRNA common_peak2_37_44_-0.522689641784527_5.23050827543741_0.792815190339775-3 chr3 96197319 96197652 + 0.792815190339775 NA intron (NM_026975, intron 1 of 1) CpG 101 NM_026975 69168 Mm.104531 NM_026975 ENSMUSG00000015943 Bola1 1810037G04Rik bolA-like 1 (E. coli) protein-coding common_peak1_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-2 chr15 77861353 77861852 + 0.792815190339775 NA Intergenic Intergenic -19427 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_37_44_-0.522689641784527_5.23050827543741_0.792815190339775-2 chr2 151542034 151542408 + 0.792815190339775 NA promoter-TSS (NM_001302078) promoter-TSS (NM_001302078) -262 NR_126058 14225 Mm.278458 NM_008019 ENSMUSG00000032966 Fkbp1a FKBP12|Fkbp|Fkbp1 FK506 binding protein 1a protein-coding common_peak2_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-6 chr5 41843889 41844559 + 0.792815190339775 NA promoter-TSS (NM_001310601) promoter-TSS (NM_001310601) 91 NM_001310601 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak2_36_44_-0.560892355272233_5.21140691869356_0.792815190339775 chr12 52503140 52503613 + 0.792815190339775 NA Intergenic Intergenic -12701 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak1_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-3 chr17 72969042 72969584 + 0.792815190339775 NA Intergenic Intergenic 51008 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-4 chr4 132921959 132922481 + 0.792815190339775 NA intron (NM_145553, intron 1 of 8) CpG 331 NM_145553 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak2_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-4 chr16 23240473 23241320 + 0.792815190339775 NA intron (NM_001252505, intron 1 of 7) intron (NM_001252505, intron 1 of 7) 14875 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_37_44_-0.522689641784527_5.23050827543741_0.792815190339775 chr2 5951594 5951902 + 0.792815190339775 NA intron (NM_001081132, intron 1 of 21) CpG 279 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_37_44_-0.522689641784527_5.23050827543741_0.792815190339775-4 chr8 3411682 3412182 + 0.792815190339775 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 18924 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding unique_peak2_37_44_-0.522689641784527_5.23050827543741_0.792815190339775 chr13 8870122 8870899 + 0.792815190339775 NA intron (NM_001039388, intron 1 of 13) intron (NM_001039388, intron 1 of 13) 534 NM_001039389 207615 Mm.284654 NM_172445 ENSMUSG00000021147 Wdr37 - WD repeat domain 37 protein-coding common_peak2_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-2 chr12 102292050 102292641 + 0.792815190339775 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 8704 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_36_44_-0.560892355272233_5.21140691869356_0.792815190339775-5 chr4 133631273 133631770 + 0.792815190339775 NA intron (NM_001017968, intron 1 of 7) intron (NM_001017968, intron 1 of 7) 1908 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_37_44_-0.522689641784527_5.23050827543741_0.792815190339775 chr7 66110000 66110584 + 0.792815190339775 NA intron (NM_001081163, intron 1 of 2) CpG 777 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_36_44_-0.560892355272233_5.21140691869356_0.792815190339775 chr12 10492126 10492513 + 0.792815190339775 NA intron (NR_110487, intron 9 of 11) intron (NR_110487, intron 9 of 11) 45931 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769-5 chr2 155978995 155979371 + 0.792815190339769 NA exon (NM_001129999, exon 19 of 33) exon (NM_001129999, exon 19 of 33) 22625 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769 chr19 37814422 37815041 + 0.792815190339769 NA Intergenic Intergenic 116923 NM_007811 13082 Mm.42230 NM_007811 ENSMUSG00000024987 Cyp26a1 Cyp26|P450RA|P450RAI|RAH cytochrome P450, family 26, subfamily a, polypeptide 1 protein-coding common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769-2 chr14 76480038 76480579 + 0.792815190339769 NA intron (NM_207652, intron 1 of 2) intron (NM_207652, intron 1 of 2) -8128 NM_001177751 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_53_31_0.47254685090016_5.23627342545008_0.792815190339769-2 chr2 137706993 137707964 + 0.792815190339769 NA Intergenic Intergenic -549106 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_53_31_0.47254685090016_5.23627342545008_0.792815190339769 chr10 121365135 121365660 + 0.792815190339769 NA intron (NM_029364, intron 1 of 13) CpG 307 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding unique_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769 chr1 136686112 136686907 + 0.792815190339769 NA intron (NR_045325, intron 1 of 2) intron (NR_045325, intron 1 of 2) 2880 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769-5 chr8 46487864 46488286 + 0.792815190339769 NA intron (NM_007981, intron 1 of 20) intron (NM_007981, intron 1 of 20) -2891 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_53_31_0.47254685090016_5.23627342545008_0.792815190339769 chr4 63545550 63546232 + 0.792815190339769 NA intron (NM_024173, intron 1 of 2) intron (NM_024173, intron 1 of 2) 1126 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769-7 chr9 51962876 51963560 + 0.792815190339769 NA intron (NM_007996, intron 1 of 3) CpG 384 NM_001301728 14148 Mm.1061 NM_007996 ENSMUSG00000032051 Fdx1 - ferredoxin 1 protein-coding common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769-4 chr2 90904197 90904613 + 0.792815190339769 NA promoter-TSS (NM_001311116) promoter-TSS (NM_001311116) 316 NM_026688 68349 Mm.30113 NM_026688 ENSMUSG00000005510 Ndufs3 0610010M09Rik|CI-30kD NADH dehydrogenase (ubiquinone) Fe-S protein 3 protein-coding common_peak1_53_31_0.47254685090016_5.23627342545008_0.792815190339769-4 chr8 86902397 86902735 + 0.792815190339769 NA Intergenic Intergenic -17308 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769-3 chr4 125116130 125116741 + 0.792815190339769 NA Intergenic Intergenic 11446 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_53_31_0.47254685090016_5.23627342545008_0.792815190339769-3 chr7 143978203 143978805 + 0.792815190339769 NA Intergenic CpG -30750 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769 chr11 62551237 62551669 + 0.792815190339769 NA promoter-TSS (NR_002875) promoter-TSS (NR_002875) -51 NR_002875 218963 Mm.282093 NR_002875 Gm1821 - ubiquitin pseudogene pseudo common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769-6 chr7 108934564 108935037 + 0.792815190339769 NA exon (NM_025344, exon 1 of 8) exon (NM_025344, exon 1 of 8) 385 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769-4 chr8 36027439 36027887 + 0.792815190339769 NA Intergenic Intergenic -67165 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_52_31_0.44577005526986_5.22288502763493_0.792815190339769-3 chr15 77859274 77860140 + 0.792815190339769 NA Intergenic MIRc|SINE|MIR -17532 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769-2 chr15 85611090 85611777 + 0.792815190339769 NA Intergenic Intergenic -29612 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_52_31_0.44577005526986_5.22288502763493_0.792815190339769-2 chr3 135627924 135628419 + 0.792815190339769 NA intron (NM_008689, intron 6 of 24) intron (NM_008689, intron 6 of 24) 63376 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_31_38_-0.562417154217697_5.0041936417534_0.792515101870073 chr4 99491467 99491943 + 0.792515101870073 NA Intergenic Intergenic -164594 NM_010425 15221 Mm.4758 NM_010425 ENSMUSG00000067261 Foxd3 CWH3|Genesis|Hfh2 forkhead box D3 protein-coding common_peak2_31_38_-0.562417154217697_5.0041936417534_0.792515101870073-2 chr5 50058438 50058910 + 0.792515101870073 NA exon (NM_133911, exon 1 of 19) exon (NM_133911, exon 1 of 19) 322 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding common_peak1_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-2 chr12 25132486 25132907 + 0.792515101870073 NA TTS (NR_045844) TTS (NR_045844) 3522 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-4 chr5 21784831 21785206 + 0.792515101870073 NA promoter-TSS (NM_011188) promoter-TSS (NM_011188) 147 NM_009584 22791 Mm.266312 NM_009584 ENSMUSG00000029014 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ heat shock protein family (Hsp40) member C2 protein-coding common_peak2_30_38_-0.607897699736222_4.98145336899414_0.792515101870073 chr10 41489979 41490618 + 0.792515101870073 NA promoter-TSS (NM_009213) promoter-TSS (NM_009213) 42 NM_009213 20598 Mm.953 NM_009213 ENSMUSG00000019822 Smpd2 AW108287|nSMase|nSMase1 sphingomyelin phosphodiesterase 2, neutral protein-coding common_peak2_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-3 chr17 75472823 75473618 + 0.792515101870073 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 7682 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak1_30_38_-0.607897699736222_4.98145336899414_0.792515101870073 chr1 82290080 82290820 + 0.792515101870073 NA exon (NM_010570, exon 1 of 2) exon (NM_010570, exon 1 of 2) 989 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak1_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-4 chr4 89478636 89479040 + 0.792515101870073 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -167806 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-2 chr10 86161999 86162404 + 0.792515101870073 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 66347 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_31_38_-0.562417154217697_5.0041936417534_0.792515101870073-2 chr5 50058430 50058892 + 0.792515101870073 NA exon (NM_133911, exon 1 of 19) exon (NM_133911, exon 1 of 19) 335 NM_133911 70693 Mm.272974 NM_133911 ENSMUSG00000029090 Adgra3 3830613O22Rik|AU044632|Gpr125|Tem5-like adhesion G protein-coupled receptor A3 protein-coding common_peak2_31_38_-0.562417154217697_5.0041936417534_0.792515101870073 chr4 116556118 116556952 + 0.792515101870073 NA promoter-TSS (NM_177670) promoter-TSS (NM_177670) -592 NM_177670 230657 Mm.291484 NM_177670 ENSMUSG00000055900 Tmem69 A630048M13Rik transmembrane protein 69 protein-coding common_peak1_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-3 chr3 83845017 83845326 + 0.792515101870073 NA Intergenic Intergenic -3563 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak2_31_38_-0.562417154217697_5.0041936417534_0.792515101870073-3 chr9 63699052 63699703 + 0.792515101870073 NA intron (NM_016769, intron 1 of 8) (CAGG)n|Simple_repeat|Simple_repeat 58617 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_30_38_-0.607897699736222_4.98145336899414_0.792515101870073-2 chr8 36684801 36685368 + 0.792515101870073 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 47970 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_30_38_-0.607897699736222_4.98145336899414_0.792515101870073 chr5 43807900 43808613 + 0.792515101870073 NA Intergenic CpG -10637 NM_009763 12182 Mm.246332 NM_009763 ENSMUSG00000029082 Bst1 114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65 bone marrow stromal cell antigen 1 protein-coding common_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-5 chr2 119662311 119663040 + 0.792515101870067 NA 5' UTR (NM_027175, exon 1 of 5) 5' UTR (NM_027175, exon 1 of 5) 159 NM_001356467 69702 Mm.5390 NM_027175 ENSMUSG00000027305 Ndufaf1 2410001M24Rik|CGI-65|CIA30 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 protein-coding unique_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-2 chr2 145756311 145756962 + 0.792515101870067 NA Intergenic Intergenic -29480 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding common_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-6 chr7 47007708 47008175 + 0.792515101870067 NA intron (NM_175318, intron 1 of 5) CpG 473 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding unique_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-3 chr6 112889995 112890779 + 0.792515101870067 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 56879 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067 chr11 87592433 87592917 + 0.792515101870067 NA intron (NM_133215, intron 1 of 18) intron (NM_133215, intron 1 of 18) 509 NM_133215 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-2 chr13 43398408 43398901 + 0.792515101870067 NA exon (NM_023554, exon 1 of 8) exon (NM_023554, exon 1 of 8) 278 NM_023554 70078 Mm.439927 NM_023554 ENSMUSG00000063200 Nol7 2210008F15Rik|5730556I21Rik|NOP27|RARG-1 nucleolar protein 7 protein-coding common_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-4 chr19 24981673 24982365 + 0.792515101870067 NA Intergenic Intergenic -17510 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067-3 chr17 35634499 35634831 + 0.792515101870067 NA Intergenic Intergenic -8028 NM_001244654 672682 Mm.454025 NM_001244654 ENSMUSG00000090588 Gm9573 Muc21 predicted gene 9573 protein-coding common_peak1_45_26_0.487965799632787_4.99887040197986_0.792515101870067 chr10 17009793 17010506 + 0.792515101870067 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 85633 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_241_228_-0.217948006693863_7.73022978475001_0.792474551410939 chr11 86599553 86602826 + 0.792474551410939 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -17031 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_246_172_0.215923397999252_7.54258992663635_0.791124523305029 chr9 62342253 62344557 + 0.791124523305029 NA intron (NM_009672, intron 1 of 6) CpG 2062 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_98_63_0.340846607051969_6.17042330352598_0.790891654307598 chr8 90824917 90825986 + 0.790891654307598 NA Intergenic Intergenic -3384 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_98_63_0.340846607051969_6.17042330352598_0.790891654307598 chr4 107467244 107468185 + 0.790891654307598 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 32995 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_230_160_0.223698196710783_7.44276597647001_0.790764479838999 chr13 63241590 63243461 + 0.790764479838999 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 2496 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_129_129_-0.291282698965951_6.87672646354548_0.790625689510332 chr5 31567145 31569129 + 0.790625689510332 NA Intergenic Intergenic 3260 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_171_116_0.261767851479539_7.00124864532317_0.790329511085542 chr14 25486961 25488730 + 0.790329511085542 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 28660 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_59_65_-0.420916553732568_5.83393584249217_0.790272552182767 chr13 45880211 45880984 + 0.790272552182767 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 84394 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_59_65_-0.420916553732568_5.83393584249217_0.790272552182767 chr9 40801285 40801903 + 0.790272552182767 NA intron (NM_031165, intron 1 of 8) CpG 321 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak1_78_49_0.373711476500552_5.830711928025_0.790272552182755-2 chr15 85634836 85635412 + 0.790272552182755 NA Intergenic Intergenic -53303 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_78_49_0.373711476500552_5.830711928025_0.790272552182755 chr3 19311609 19312134 + 0.790272552182755 NA promoter-TSS (NM_001122759) promoter-TSS (NM_001122759) -549 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_78_49_0.373711476500552_5.830711928025_0.790272552182755 chr10 80385946 80386850 + 0.790272552182755 NA intron (NM_198615, intron 1 of 1) intron (NM_198615, intron 1 of 1) 1253 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding common_peak1_78_49_0.373711476500552_5.830711928025_0.790272552182755-3 chr2 26315492 26316523 + 0.790272552182755 NA intron (NM_001355575, intron 1 of 13) intron (NM_001355575, intron 1 of 13) 474 NM_153410 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding common_peak2_78_49_0.373711476500552_5.830711928025_0.790272552182755-3 chr6 37431766 37432478 + 0.790272552182755 NA intron (NM_178661, intron 1 of 11) PB1D10|SINE|Alu 10026 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_78_49_0.373711476500552_5.830711928025_0.790272552182755-2 chr3 103280036 103280934 + 0.790272552182755 NA intron (NM_001079830, intron 1 of 18) CpG 1192 NM_053170 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_120_79_0.306382666088962_6.47511942793184_0.790033289971848 chr8 27260441 27261204 + 0.790033289971848 NA intron (NM_007918, intron 1 of 2) intron (NM_007918, intron 1 of 2) 495 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak2_96_99_-0.332245635363646_6.4777333720929_0.790033289971848 chr9 64737167 64738125 + 0.790033289971848 NA 5' UTR (NM_017382, exon 1 of 5) 5' UTR (NM_017382, exon 1 of 5) 110 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_86_90_-0.352046016593976_6.33177163190171_0.789061865030664 chr19 8929218 8930242 + 0.789061865030664 NA promoter-TSS (NM_009073) promoter-TSS (NM_009073) 36 NM_144872 225898 Mm.31008 NM_144872 ENSMUSG00000071647 Eml3 BC022146 echinoderm microtubule associated protein like 3 protein-coding common_peak1_88_56_0.355417212235186_6.01059862028233_0.788925108854929-2 chr15 13275057 13276017 + 0.788925108854929 NA Intergenic Intergenic -101862 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_67_73_-0.406677487865743_6.00611462169608_0.788925108854929 chr16 24495918 24496680 + 0.788925108854929 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -33015 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_88_56_0.355417212235186_6.01059862028233_0.788925108854929 chr10 82859282 82859804 + 0.788925108854929 NA promoter-TSS (NM_001042514) promoter-TSS (NM_001042514) 337 NM_015762 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak1_88_56_0.355417212235186_6.01059862028233_0.788925108854929-3 chr15 66862067 66862754 + 0.788925108854929 NA Intergenic Intergenic -28983 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_88_56_0.355417212235186_6.01059862028233_0.788925108854929-4 chr4 89428250 89429115 + 0.788925108854929 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -117650 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_67_73_-0.406677487865743_6.00611462169608_0.788925108854929 chr13 52981279 52982123 + 0.788925108854929 NA promoter-TSS (NM_017373) promoter-TSS (NM_017373) -662 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_212_202_-0.226934552824234_7.55186864077306_0.788505441262035 chr19 10524736 10526191 + 0.788505441262035 NA promoter-TSS (NM_025333) promoter-TSS (NM_025333) 219 NM_172302 269061 Mm.490260 NM_172302 ENSMUSG00000034820 Cpsf7 5730453I16Rik|AL022757|C330017N18Rik cleavage and polyadenylation specific factor 7 protein-coding common_peak2_212_202_-0.226934552824234_7.55186864077306_0.788505441262035 chr4 86856056 86857959 + 0.788505441262035 NA intron (NM_009096, intron 1 of 4) CpG 360 NM_009096 20104 Mm.379007 NM_009096 ENSMUSG00000028495 Rps6 S6R ribosomal protein S6 protein-coding common_peak2_118_119_-0.302455668271181_6.75566276147293_0.788445440019706 chr7 84547044 84548361 + 0.788445440019706 NA intron (NR_045098, intron 1 of 2) PB1D7|SINE|Alu 18748 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_155_152_-0.265124025156572_7.12482583011437_0.788124001593012 chr9 53666292 53667568 + 0.788124001593012 NA intron (NM_001161618, intron 1 of 17) CpG 577 NM_001161618 75717 Mm.218910 NM_027807 ENSMUSG00000032030 Cul5 4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1 cullin 5 protein-coding common_peak1_132_88_0.288034093579635_6.61975047775621_0.788056012377237 chr3 32395949 32396808 + 0.788056012377237 NA Intergenic Intergenic -30713 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_106_109_-0.329193676495501_6.61676287527691_0.788056012377237 chr6 108456519 108457402 + 0.788056012377237 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -32783 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_106_109_-0.329193676495501_6.61676287527691_0.788056012377237 chr12 80228252 80229660 + 0.788056012377237 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 31415 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_106_109_-0.329193676495501_6.61676287527691_0.788056012377237-2 chr6 108456491 108457417 + 0.788056012377237 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -32789 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_107_109_-0.315867842197745_6.62342579242579_0.788056012377237 chr13 49420573 49422063 + 0.788056012377237 NA promoter-TSS (NM_199056) promoter-TSS (NM_199056) 95 NM_199056 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak2_231_161_0.220953059346154_7.4503265325577_0.787959985331892 chr11 3537230 3538350 + 0.787959985331892 NA intron (NM_001284428, intron 1 of 21) intron (NM_001284428, intron 1 of 21) 1502 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_61_37_0.422522026109196_5.45918852649818_0.786737236353031-3 chr8 113878117 113878561 + 0.786737236353031 NA Intergenic Intergenic -29500 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding common_peak1_61_37_0.422522026109196_5.45918852649818_0.786737236353031-2 chr7 128320881 128321336 + 0.786737236353031 NA Intergenic Intergenic -22977 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak1_61_37_0.422522026109196_5.45918852649818_0.786737236353031 chr2 120970149 120970621 + 0.786737236353031 NA intron (NM_009461, intron 1 of 46) intron (NM_009461, intron 1 of 46) 330 NM_009461 22222 Mm.389330 NM_009461 ENSMUSG00000027272 Ubr1 AI504731 ubiquitin protein ligase E3 component n-recognin 1 protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-4 chr5 25529962 25530450 + 0.786737236353019 NA non-coding (NR_027388, exon 1 of 1) non-coding (NR_027388, exon 1 of 1) 188 NR_027388 73571 Mm.105263 NR_027388 ENSMUSG00000101856 1700096K18Rik - RIKEN cDNA 1700096K18 gene ncRNA common_peak1_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-3 chr8 84501454 84501751 + 0.786737236353019 NA intron (NM_001252060, intron 3 of 47) intron (NM_001252060, intron 3 of 47) 86238 NM_001252061 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding common_peak1_44_51_-0.489071570714508_5.45590393278384_0.786737236353019 chr1 152903574 152904177 + 0.786737236353019 NA Intergenic CpG-603 -1229 NM_001005507 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019 chr11 117822202 117823082 + 0.786737236353019 NA intron (NM_001271729, intron 2 of 5) B3|SINE|B2 -3277 NM_027827 71562 Mm.273958 NM_027827 ENSMUSG00000017718 Afmid 9030621K19Rik|Ammd|FKF|KFA|Kf|formylase arylformamidase protein-coding common_peak1_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-2 chr2 60640462 60640920 + 0.786737236353019 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 33002 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-7 chr7 114204030 114204725 + 0.786737236353019 NA Intergenic (TCCC)n|Simple_repeat|Simple_repeat 50303 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-5 chr7 49808413 49808987 + 0.786737236353019 NA intron (NM_133740, intron 10 of 15) intron (NM_133740, intron 10 of 15) 30342 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-2 chr13 51763431 51764460 + 0.786737236353019 NA intron (NM_013660, intron 1 of 15) RSINE1|SINE|B4 29802 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-6 chr7 80688167 80688784 + 0.786737236353019 NA intron (NM_173863, intron 1 of 14) CpG 402 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding common_peak2_44_51_-0.489071570714508_5.45590393278384_0.786737236353019-3 chr2 122146625 122147450 + 0.786737236353019 NA promoter-TSS (NM_009735) promoter-TSS (NM_009735) -650 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak2_70_43_0.405189123069434_5.66202618017201_0.786568022251753 chr9 32696326 32696865 + 0.786568022251753 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 553 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_70_43_0.405189123069434_5.66202618017201_0.786568022251753-2 chr18 46674845 46676060 + 0.786568022251753 NA Intergenic PB1D10|SINE|Alu 53050 NM_033037 12583 Mm.241056 NM_033037 ENSMUSG00000033022 Cdo1 1300002L19Rik|Cdo|D18Ucla3 cysteine dioxygenase 1, cytosolic protein-coding common_peak1_70_43_0.405189123069434_5.66202618017201_0.786568022251753 chr12 3425669 3426546 + 0.786568022251753 NA promoter-TSS (NM_172421) promoter-TSS (NM_172421) 640 NR_030694 100043040 Mm.415417 NR_030694 ENSMUSG00000071456 1110002L01Rik - RIKEN cDNA 1110002L01 gene ncRNA common_peak2_51_58_-0.464159854479973_5.65056312212186_0.78656802225174-4 chr8 64205324 64205958 + 0.78656802225174 NA 5' UTR (NM_009390, exon 1 of 21) 5' UTR (NM_009390, exon 1 of 21) 367 NM_009390 21892 Mm.418367 NM_009390 ENSMUSG00000053626 Tll1 Tll|Tll-1|b2b2476Clo tolloid-like protein-coding common_peak1_51_58_-0.464159854479973_5.65056312212186_0.78656802225174 chr12 98574146 98574958 + 0.78656802225174 NA 5' UTR (NM_001316666, exon 1 of 5) 5' UTR (NM_001316666, exon 1 of 5) 160 NM_001316666 72258 Mm.196158 NM_029911 ENSMUSG00000033854 Kcnk10 1700024D23Rik|3010005K24Rik|Trek2 potassium channel, subfamily K, member 10 protein-coding common_peak2_51_58_-0.464159854479973_5.65056312212186_0.78656802225174-3 chr4 139202015 139203077 + 0.78656802225174 NA intron (NM_001271405, intron 1 of 8) B2_Mm1t|SINE|B2 8435 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_51_58_-0.464159854479973_5.65056312212186_0.78656802225174 chr11 115564017 115564698 + 0.78656802225174 NA promoter-TSS (NM_001002929) promoter-TSS (NM_001002929) -87 NM_001002929 445007 Mm.4379 NM_001002929 ENSMUSG00000020739 Nup85 Pcnt1|frount nucleoporin 85 protein-coding common_peak1_51_58_-0.464159854479973_5.65056312212186_0.78656802225174-3 chr9 21002632 21003484 + 0.78656802225174 NA intron (NM_001357899, intron 1 of 8) CpG 321 NM_001357899 66163 Mm.427576 NM_023167 ENSMUSG00000003299 Mrpl4 1110017G11Rik mitochondrial ribosomal protein L4 protein-coding common_peak2_51_58_-0.464159854479973_5.65056312212186_0.78656802225174-2 chr2 75658347 75658862 + 0.78656802225174 NA promoter-TSS (NM_198090) promoter-TSS (NM_198090) -655 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak1_51_58_-0.464159854479973_5.65056312212186_0.78656802225174-2 chr16 22009570 22010166 + 0.78656802225174 NA intron (NM_001357424, intron 1 of 15) CpG 384 NM_001357424 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding common_peak2_198_190_-0.236420475687797_7.45921859019185_0.785187462026939 chr3 37907622 37909396 + 0.785187462026939 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 9696 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_491_357_0.153869433417148_8.56075049397283_0.784744079313263 chr6 31084934 31088529 + 0.784744079313263 NA Intergenic Intergenic -23638 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_156_153_-0.265369229670495_7.13410192585965_0.784647913934998 chr17 27203344 27204536 + 0.784647913934998 NA exon (NM_146075, exon 1 of 9) exon (NM_146075, exon 1 of 9) 498 NM_146075 224640 Mm.29689 NM_146075 ENSMUSG00000044857 Lemd2 BC026588|Lem2|NET25 LEM domain containing 2 protein-coding common_peak1_121_80_0.300251086845008_6.48997554630713_0.784577255940966 chr1 163929743 163930599 + 0.784577255940966 NA 5' UTR (NM_028776, exon 1 of 14) 5' UTR (NM_028776, exon 1 of 14) 406 NM_028776 240880 Mm.389213 NM_028776 ENSMUSG00000026584 Scyl3 1200016D23Rik|6030457O16|AW214499|Pace1 SCY1-like 3 (S. cerevisiae) protein-coding common_peak1_97_100_-0.331908318958984_6.4922573232723_0.784577255940941 chr5 138116944 138117917 + 0.784577255940941 NA intron (NM_001044703, intron 1 of 3) intron (NM_001044703, intron 1 of 3) 525 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak2_97_100_-0.331908318958984_6.4922573232723_0.784577255940941 chr1 190928058 190929129 + 0.784577255940941 NA promoter-TSS (NM_021421) promoter-TSS (NM_021421) 88 NM_021421 52477 Mm.289914 NM_021421 ENSMUSG00000026634 Angel2 2610307I21Rik|5730410O10Rik|AI845692|D1Ertd396e|D1Ertd654e angel homolog 2 protein-coding common_peak2_77_82_-0.3757206342376_6.18717911422812_0.78414664851096-3 chr8 64672156 64672935 + 0.78414664851096 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 20564 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_77_82_-0.3757206342376_6.18717911422812_0.78414664851096-2 chr7 74279804 74280537 + 0.78414664851096 NA intron (NM_001038643, intron 10 of 10) intron (NM_001038643, intron 10 of 10) -266488 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_77_82_-0.3757206342376_6.18717911422812_0.78414664851096 chr13 75942879 75944034 + 0.78414664851096 NA intron (NM_028493, intron 1 of 11) CpG-4025 368 NM_028493 73296 Mm.276200 NM_028493 ENSMUSG00000021589 Rhobtb3 1700040C17Rik|2610033K01Rik|4930503C18Rik|AI317148|AW208826|mKIAA0878 Rho-related BTB domain containing 3 protein-coding common_peak2_146_98_0.277782145940655_6.76824769304994_0.78395838818748 chr15 79441069 79442060 + 0.78395838818748 NA 5' UTR (NM_001289899, exon 1 of 9) 5' UTR (NM_001289899, exon 1 of 9) 254 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_108_110_-0.31572098122166_6.63655537573928_0.783142886066638 chr7 28337874 28339145 + 0.783142886066638 NA intron (NM_013676, intron 1 of 29) CpG-12904 210 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak2_134_89_0.293295673751119_6.63850093320523_0.783142886066638 chr15 99331806 99333009 + 0.783142886066638 NA intron (NM_001310622, intron 4 of 25) intron (NM_001310622, intron 4 of 25) 29123 NM_001348256 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak1_110_72_0.314916804831635_6.34728296129584_0.783046215318607 chr4 109675964 109677405 + 0.783046215318607 NA promoter-TSS (NM_007983) promoter-TSS (NM_007983) 57 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak1_110_72_0.314916804831635_6.34728296129584_0.783046215318607-2 chr8 3417201 3418149 + 0.783046215318607 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 24667 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_110_72_0.314916804831635_6.34728296129584_0.783046215318607 chr4 43967793 43968800 + 0.783046215318607 NA intron (NM_027450, intron 2 of 4) intron (NM_027450, intron 2 of 4) 10594 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_87_91_-0.351441533033197_6.34784118954041_0.783046215318582-2 chr8 79710730 79711632 + 0.783046215318582 NA promoter-TSS (NM_001357235) promoter-TSS (NM_001357235) 559 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|RNS4I|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding common_peak1_87_91_-0.351441533033197_6.34784118954041_0.783046215318582 chr1 43254974 43256133 + 0.783046215318582 NA Intergenic Intergenic -58792 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_184_178_-0.247308096599425_7.36016172896454_0.782727595823912 chr19 24476537 24478088 + 0.782727595823912 NA exon (NM_026520, exon 1 of 1) exon (NM_026520, exon 1 of 1) 162 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|Gm9849 family with sequence similarity 122, member A protein-coding common_peak1_160_108_0.269273047020214_6.90282084828703_0.782405956246185 chr9 57432271 57433793 + 0.782405956246185 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 6704 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-9 chr18 61059612 61060244 + 0.781990829058356 NA intron (NM_008809, intron 1 of 22) MIR3|SINE|MIR 14778 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-6 chr7 49245258 49245870 + 0.781990829058356 NA promoter-TSS (NM_175272) promoter-TSS (NM_175272) -625 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-2 chr12 54710065 54710278 + 0.781990829058356 NA Intergenic Intergenic -14277 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-6 chr14 25841952 25842515 + 0.781990829058356 NA promoter-TSS (NM_013469) promoter-TSS (NM_013469) 78 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-5 chr15 71863351 71863783 + 0.781990829058356 NA intron (NM_027174, intron 44 of 63) intron (NM_027174, intron 44 of 63) -135729 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding unique_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-2 chr10 81406947 81407600 + 0.781990829058356 NA intron (NM_026756, intron 6 of 8) intron (NM_026756, intron 6 of 8) -2302 NR_152732 102634174 Mm.392213 NR_152732 ENSMUSG00000085327 Gm16104 - predicted gene 16104 ncRNA common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-12 chr3 126046523 126046877 + 0.781990829058356 NA Intergenic Intergenic -108048 NR_149311 22239 Mm.306021 NM_011674 ENSMUSG00000032854 Ugt8a AI850488|AW455908|Cgt|Ugt8|mCerGT UDP galactosyltransferase 8A protein-coding common_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-5 chr6 128029981 128030561 + 0.781990829058356 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 113307 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-2 chr11 86257070 86257409 + 0.781990829058356 NA 5' UTR (NM_027421, exon 1 of 25) 5' UTR (NM_027421, exon 1 of 25) 329 NM_027421 70422 Mm.171304 NM_027421 ENSMUSG00000018068 Ints2 2810417D08Rik|AA408260|AI987735|mKIAA1287 integrator complex subunit 2 protein-coding common_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-4 chr4 56373997 56374333 + 0.781990829058356 NA Intergenic Intergenic 367260 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-3 chr12 104001052 104001584 + 0.781990829058356 NA exon (NM_001361910, exon 3 of 5) exon (NM_001361910, exon 3 of 5) -11361 NM_001166350 380780 Mm.201338 NM_199314 ENSMUSG00000063232 Serpina11 Gm895 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 protein-coding unique_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-2 chrX 42067998 42068459 + 0.781990829058356 NA promoter-TSS (NR_125870) promoter-TSS (NR_125870) -170 NM_001301639 11798 Mm.259879 NM_009688 ENSMUSG00000025860 Xiap 1110015C02Rik|Aipa|Api3|Birc4|IAP3|ILP-1|MIHA X-linked inhibitor of apoptosis protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-8 chr5 125134991 125135367 + 0.781990829058356 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 44035 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-3 chr2 153436956 153437385 + 0.781990829058356 NA intron (NM_001134300, intron 4 of 10) intron (NM_001134300, intron 4 of 10) 7309 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-5 chr4 123139309 123139900 + 0.781990829058356 NA intron (NM_019489, intron 1 of 9) intron (NM_019489, intron 1 of 9) 337 NM_019489 56031 Mm.126873 NM_019489 ENSMUSG00000028651 Ppie 2010010D16Rik|Cyp33 peptidylprolyl isomerase E (cyclophilin E) protein-coding unique_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356 chr1 137591600 137592285 + 0.781990829058356 NA Intergenic Intergenic -374513 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356 chr1 66862613 66863113 + 0.781990829058356 NA intron (NM_007381, intron 1 of 10) CpG 446 NM_007381 11363 Mm.2445 NM_007381 ENSMUSG00000026003 Acadl AA960361|AU018452|C79855|LCAD acyl-Coenzyme A dehydrogenase, long-chain protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-10 chr18 66334721 66335467 + 0.781990829058356 NA Intergenic Intergenic -43256 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-11 chr3 93023908 93024377 + 0.781990829058356 NA Intergenic Intergenic -5081 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding unique_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-6 chr5 136570527 136571208 + 0.781990829058356 NA Intergenic Intergenic -3377 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356-2 chr16 35938454 35938920 + 0.781990829058356 NA 5' UTR (NM_030253, exon 1 of 11) 5' UTR (NM_030253, exon 1 of 11) 217 NM_030253 80285 Mm.49074 NM_030253 ENSMUSG00000022906 Parp9 ARTD9|AW214463|BC003281|Bagl|Bal|PARP-9 poly (ADP-ribose) polymerase family, member 9 protein-coding common_peak1_26_33_-0.607861010776936_4.78353233586187_0.781990829058356 chr10 120636490 120636832 + 0.781990829058356 NA Intergenic Intergenic -129071 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356 chr11 49063596 49064446 + 0.781990829058356 NA 5' UTR (NM_001145164, exon 1 of 2) 5' UTR (NM_001145164, exon 1 of 2) 191 NM_001145164 100039796 Mm.482363 NM_001145164 ENSMUSG00000078921 Tgtp2 TGTP T cell specific GTPase 2 protein-coding unique_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-3 chr16 3871745 3872238 + 0.781990829058356 NA intron (NM_001033159, intron 1 of 2) intron (NM_001033159, intron 1 of 2) 383 NM_001033159 71063 Mm.379190 NM_001033159 ENSMUSG00000039789 Zfp597 4933407K12Rik|AI462383|AI666357 zinc finger protein 597 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-8 chr15 77912719 77912961 + 0.781990829058356 NA Intergenic Intergenic 16154 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-3 chr1 193388928 193389721 + 0.781990829058356 NA Intergenic Intergenic -19042 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-6 chr16 96361806 96362180 + 0.781990829058356 NA intron (NM_028078, intron 1 of 7) intron (NM_028078, intron 1 of 7) 229 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-13 chr5 64195999 64196412 + 0.781990829058356 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -34152 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-5 chr11 114849534 114849971 + 0.781990829058356 NA Intergenic Intergenic -1780 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak2_26_33_-0.607861010776936_4.78353233586187_0.781990829058356 chr4 55140715 55141281 + 0.781990829058356 NA Intergenic Intergenic 193053 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-2 chr1 135258771 135259099 + 0.781990829058356 NA promoter-TSS (NM_001163131) promoter-TSS (NM_001163131) -463 NM_007921 13710 Mm.441439 NM_007921 ENSMUSG00000003051 Elf3 ESE-1|ESX|jen E74-like factor 3 protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-7 chr3 98384443 98384748 + 0.781990829058356 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 2114 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-7 chr15 5145287 5145719 + 0.781990829058356 NA intron (NM_001013367, intron 1 of 8) intron (NM_001013367, intron 1 of 8) 1642 NM_001355640 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding unique_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-4 chr3 21564194 21564811 + 0.781990829058356 NA Intergenic Intergenic -512150 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-4 chr11 96075264 96075672 + 0.781990829058356 NA intron (NM_007506, intron 1 of 4) intron (NM_007506, intron 1 of 4) 163 NM_001161419 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak1_39_22_0.519080007341417_4.78310195972772_0.781990829058356-14 chr9 123213218 123213654 + 0.781990829058356 NA intron (NM_133974, intron 1 of 8) intron (NM_133974, intron 1 of 8) 2602 NM_133974 109332 Mm.27519 NM_133974 ENSMUSG00000035498 Cdcp1 9030022E12Rik|AA409659|E030027H19Rik CUB domain containing protein 1 protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356-4 chr13 46929180 46929605 + 0.781990829058356 NA intron (NM_010617, intron 1 of 37) CpG 326 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding common_peak2_39_22_0.519080007341417_4.78310195972772_0.781990829058356 chr11 69672774 69673088 + 0.781990829058356 NA promoter-TSS (NM_144958) promoter-TSS (NM_144958) -508 NM_001159375 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak1_79_50_0.363161641853691_5.85400616289834_0.781782704927518 chr2 173000110 173000998 + 0.781782704927518 NA intron (NM_175112, intron 1 of 11) CpG 437 NM_175112 66679 Mm.4113 NM_175112 ENSMUSG00000027509 Rae1 3230401I12Rik|D2Ertd342e|MNRP|MNRP41 ribonucleic acid export 1 protein-coding common_peak2_80_50_0.380957111156119_5.86290389754955_0.781782704927518-3 chr9 78175744 78176419 + 0.781782704927518 NA intron (NR_040401, intron 1 of 3) CpG 167 NR_040401 320295 Mm.131285 NR_040401 ENSMUSG00000097574 C920006O11Rik - RIKEN cDNA C920006O11 gene ncRNA common_peak2_80_50_0.380957111156119_5.86290389754955_0.781782704927518 chr19 29641492 29642270 + 0.781782704927518 NA intron (NM_001362131, intron 2 of 14) intron (NM_001362131, intron 2 of 14) 6534 NM_001081213 226090 Mm.267131 NM_001081213 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|b2b2633Clo|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak2_79_50_0.363161641853691_5.85400616289834_0.781782704927518 chr3 27938407 27939053 + 0.781782704927518 NA promoter-TSS (NM_001164056) promoter-TSS (NM_001164056) 50 NM_001164056 18805 Mm.212039 NM_008875 ENSMUSG00000027695 Pld1 AA536939|C85393|Pld1a|Pld1b|mPLD1 phospholipase D1 protein-coding common_peak2_80_50_0.380957111156119_5.86290389754955_0.781782704927518-2 chr7 25781564 25782324 + 0.781782704927518 NA intron (NM_009465, intron 4 of 19) intron (NM_009465, intron 4 of 19) 6789 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak2_60_66_-0.418933121154896_5.85662262988032_0.781782704927505 chr13 15862554 15863531 + 0.781782704927505 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 55799 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak2_60_66_-0.418933121154896_5.85662262988032_0.781782704927505-3 chr2 26639774 26640175 + 0.781782704927505 NA promoter-TSS (NR_028571) promoter-TSS (NR_028571) 270 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak2_60_66_-0.418933121154896_5.85662262988032_0.781782704927505-4 chr2 131210081 131211266 + 0.781782704927505 NA non-coding (NR_110992, exon 1 of 2) non-coding (NR_110992, exon 1 of 2) 313 NR_110992 69596 Mm.2937 NM_027129 ENSMUSG00000068264 Ap5s1 0610038L13Rik|2310035K24Rik|AW060727|sigma5 adaptor-related protein 5 complex, sigma 1 subunit protein-coding common_peak2_60_66_-0.418933121154896_5.85662262988032_0.781782704927505-2 chr13 51845408 51846230 + 0.781782704927505 NA promoter-TSS (NM_011817) promoter-TSS (NM_011817) -856 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_68_74_-0.405129786472171_6.02625379725979_0.781433730164725-3 chrX 17571068 17572264 + 0.781433730164725 NA intron (NM_001313745, intron 1 of 3) intron (NM_001313745, intron 1 of 3) 341 NM_001313746 72018 Mm.41558 NM_028058 ENSMUSG00000025040 Fundc1 1500005J14Rik|1810033P05Rik FUN14 domain containing 1 protein-coding common_peak2_69_74_-0.384517677523322_6.03655985173422_0.781433730164725-2 chr18 32239752 32240639 + 0.781433730164725 NA promoter-TSS (NM_133658) promoter-TSS (NM_133658) -136 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding common_peak1_69_74_-0.384517677523322_6.03655985173422_0.781433730164725 chr15 98093374 98093910 + 0.781433730164725 NA promoter-TSS (NM_144851) promoter-TSS (NM_144851) -73 NM_144851 223870 Mm.384023 NM_144851 ENSMUSG00000033075 Senp1 2310046A20Rik|D15Ertd528e|E330036L07Rik|suPr-2 SUMO1/sentrin specific peptidase 1 protein-coding common_peak2_68_74_-0.405129786472171_6.02625379725979_0.781433730164725 chr4 108847067 108848446 + 0.781433730164725 NA promoter-TSS (NM_029571) promoter-TSS (NM_029571) -101 NM_029571 100087 Mm.440007 NM_029571 ENSMUSG00000073775 Kti12 1110001A12Rik|AI326810|AU014758 KTI12 homolog, chromatin associated protein-coding common_peak2_68_74_-0.405129786472171_6.02625379725979_0.781433730164725-2 chr9 13322564 13323675 + 0.781433730164725 NA Intergenic Intergenic 76163 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak2_69_74_-0.384517677523322_6.03655985173422_0.781433730164725 chr15 10793379 10794383 + 0.781433730164725 NA Intergenic Intergenic -35170 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak1_89_57_0.346332172725767_6.03114708149046_0.781433730164713 chr11 74649577 74650730 + 0.781433730164713 NA intron (NM_001081158, intron 1 of 25) intron (NM_001081158, intron 1 of 25) 658 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak1_89_57_0.346332172725767_6.03114708149046_0.781433730164713-2 chr11 97703477 97704113 + 0.781433730164713 NA exon (NM_011971, exon 2 of 6) exon (NM_011971, exon 2 of 6) 361 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak1_89_57_0.346332172725767_6.03114708149046_0.781433730164713-3 chr9 100642127 100643242 + 0.781433730164713 NA promoter-TSS (NM_001357264) promoter-TSS (NM_001357264) -764 NM_009282 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding common_peak1_89_57_0.346332172725767_6.03114708149046_0.781433730164713-4 chr9 108049356 108050220 + 0.781433730164713 NA exon (NM_001357682, exon 3 of 10) exon (NM_001357682, exon 3 of 10) 524 NM_001357682 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding common_peak1_203_140_0.237005148018624_7.25805392640811_0.781319775081245 chr19 8941970 8943069 + 0.781319775081245 NA TTS (NM_144872) TTS (NM_144872) 599 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding common_peak2_171_166_-0.251571721411108_7.2579184317685_0.781319775081195 chr18 36492813 36494351 + 0.781319775081195 NA Intergenic Intergenic 22223 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-2 chr17 35996261 35996756 + 0.781208772652439 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 2004 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-3 chr11 103268975 103269549 + 0.781208772652439 NA Intergenic Intergenic -1861 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-21 chr9 92539139 92539836 + 0.781208772652439 NA non-coding (NR_029474, exon 1 of 1) non-coding (NR_029474, exon 1 of 1) -2736 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-14 chr4 98924241 98924614 + 0.781208772652439 NA intron (NM_001356424, intron 1 of 7) CpG 617 NM_001356424 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-12 chrX 162887940 162888227 + 0.781208772652439 NA exon (NM_025932, exon 1 of 9) exon (NM_025932, exon 1 of 9) 379 NM_025932 67043 Mm.44207 NM_025932 ENSMUSG00000031357 Syap1 2010110O17Rik|AW011796|BSTA synapse associated protein 1 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-4 chr12 110592022 110592235 + 0.781208772652439 NA non-coding (NR_033340, exon 1 of 1) non-coding (NR_033340, exon 1 of 1) 754 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-11 chr7 4657867 4658114 + 0.781208772652439 NA intron (NM_172894, intron 1 of 23) intron (NM_172894, intron 1 of 23) 960 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-5 chr15 6648887 6649095 + 0.781208772652439 NA intron (NM_011815, intron 13 of 17) intron (NM_011815, intron 13 of 17) 5312 NR_155272 102632231 Mm.444780 NR_155272 LOC102632231 - uncharacterized LOC102632231 ncRNA unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-13 chr18 75499341 75499733 + 0.781208772652439 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -15108 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-3 chr11 88421942 88422340 + 0.781208772652439 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 69368 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-5 chr12 85963132 85963622 + 0.781208772652439 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 115664 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-20 chr9 65673340 65673805 + 0.781208772652439 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -2976 NM_010952 18247 Mm.116749 NM_010952 ENSMUSG00000040652 Oaz2 AZ-2|AZ2|Oaz2-ps|Sez15 ornithine decarboxylase antizyme 2 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-15 chr4 145273030 145273452 + 0.781208772652439 NA intron (NM_009401, intron 12 of 12) intron (NM_009401, intron 12 of 12) -26371 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-6 chr17 34187127 34187698 + 0.781208772652439 NA promoter-TSS (NM_013683) promoter-TSS (NM_013683) -82 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-16 chr6 91548308 91548676 + 0.781208772652439 NA Intergenic Intergenic 32457 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-5 chr4 126096686 126096951 + 0.781208772652439 NA intron (NM_138721, intron 1 of 1) CpG 165 NM_138721 116748 Mm.41865 NM_138721 ENSMUSG00000050188 Lsm10 - U7 snRNP-specific Sm-like protein LSM10 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-12 chr9 108492328 108492647 + 0.781208772652439 NA 5' UTR (NM_001168371, exon 2 of 27) 5' UTR (NM_001168371, exon 2 of 27) 1811 NM_001168373 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding unique_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439 chr10 117716236 117716658 + 0.781208772652439 NA Intergenic Intergenic -5689 NM_001288586 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439 chr11 58020821 58021338 + 0.781208772652439 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 12015 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-17 chr7 86488732 86489279 + 0.781208772652439 NA exon (NM_001011751, exon 1 of 1) exon (NM_001011751, exon 1 of 1) 544 NM_001011751 257905 Mm.377294 NM_001011751 ENSMUSG00000062878 Olfr298 MOR219-4 olfactory receptor 298 protein-coding common_peak1_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-4 chr4 59238833 59239182 + 0.781208772652439 NA Intergenic Intergenic -21044 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-9 chr5 139732924 139733245 + 0.781208772652439 NA intron (NM_174850, intron 1 of 16) intron (NM_174850, intron 1 of 16) 3249 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-10 chr7 97371664 97371981 + 0.781208772652439 NA intron (NM_199035, intron 1 of 12) intron (NM_199035, intron 1 of 12) 205 NM_199035 381903 Mm.279683 NM_199035 ENSMUSG00000035704 Alg8 AI447372|Gm1089 asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-3 chr11 52360056 52360433 + 0.781208772652439 NA promoter-TSS (NM_011694) promoter-TSS (NM_011694) -618 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-2 chr11 60707149 60707677 + 0.781208772652439 NA intron (NM_008502, intron 10 of 20) intron (NM_008502, intron 10 of 20) 7723 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 LLGL1 scribble cell polarity complex component protein-coding common_peak1_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-3 chr3 103102813 103103013 + 0.781208772652439 NA Intergenic CpG -24643 NM_177857 329727 Mm.293641 NM_177857 ENSMUSG00000007379 Dennd2c A930010I20Rik DENN/MADD domain containing 2C protein-coding common_peak2_27_14_0.624808498183406_4.21929484470022_0.781208772652439 chr2 28225613 28225939 + 0.781208772652439 NA intron (NM_001038613, intron 5 of 5) intron (NM_001038613, intron 5 of 5) 20087 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak2_27_14_0.624808498183406_4.21929484470022_0.781208772652439-3 chr6 49792947 49793405 + 0.781208772652439 NA Intergenic Intergenic -29534 NM_023456 109648 Mm.154796 NM_023456 ENSMUSG00000029819 Npy 0710005A05Rik neuropeptide Y protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-8 chr5 134957201 134957439 + 0.781208772652439 NA Intergenic Intergenic -10386 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-5 chr2 152397077 152397514 + 0.781208772652439 NA exon (NM_011438, exon 1 of 1) exon (NM_011438, exon 1 of 1) 751 NM_011438 20667 Mm.28424 NM_011438 ENSMUSG00000051817 Sox12 2010205A02Rik SRY (sex determining region Y)-box 12 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-18 chr7 98694027 98694345 + 0.781208772652439 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 8742 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439 chr1 40401437 40401742 + 0.781208772652439 NA Intergenic Intergenic -27981 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-4 chr14 28511772 28512029 + 0.781208772652439 NA exon (NM_009524, exon 2 of 5) exon (NM_009524, exon 2 of 5) 495 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-2 chr11 12072688 12073027 + 0.781208772652439 NA Intergenic Intergenic -35437 NM_010345 14783 Mm.273117 NM_010345 ENSMUSG00000020176 Grb10 5730571D09Rik|AI325020|Meg1|mKIAA0207 growth factor receptor bound protein 10 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-6 chr12 87147274 87147474 + 0.781208772652439 NA promoter-TSS (NM_010363) promoter-TSS (NM_010363) 209 NM_001252555 14874 Mm.29652 NM_010363 ENSMUSG00000021033 Gstz1 MAAI glutathione transferase zeta 1 (maleylacetoacetate isomerase) protein-coding unique_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-3 chr18 24719644 24720037 + 0.781208772652439 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 11217 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-9 chr4 147999684 147999956 + 0.781208772652439 NA promoter-TSS (NM_008725) promoter-TSS (NM_008725) -902 NM_008725 230899 Mm.482123 NM_008725 ENSMUSG00000041616 Nppa ANP|Anf|Pnd natriuretic peptide type A protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-19 chr8 64665129 64665396 + 0.781208772652439 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 27847 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-6 chr9 98261804 98262276 + 0.781208772652439 NA Intergenic Intergenic -34530 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-7 chr5 129715585 129715874 + 0.781208772652439 NA 5' UTR (NM_001356955, exon 2 of 4) 5' UTR (NM_001356955, exon 2 of 4) 232 NM_001356959 66258 Mm.249809 NM_025450 ENSMUSG00000034211 Mrps17 1810006P02Rik|Mprs17 mitochondrial ribosomal protein S17 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-10 chr14 70329181 70329487 + 0.781208772652439 NA intron (NM_144808, intron 2 of 9) PB1D7|SINE|Alu 19099 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_27_14_0.624808498183406_4.21929484470022_0.781208772652439-4 chr7 67548973 67549254 + 0.781208772652439 NA intron (NR_028144, intron 5 of 8) intron (NR_028144, intron 5 of 8) 96123 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-2 chr2 158071766 158072107 + 0.781208772652439 NA intron (NM_001291135, intron 7 of 7) intron (NM_001291135, intron 7 of 7) 19861 NR_040609 72340 Mm.443395 NR_040609 ENSMUSG00000100860 2010009K17Rik - RIKEN cDNA 2010009K17 gene ncRNA common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-6 chr4 136568247 136568891 + 0.781208772652439 NA intron (NM_001356567, intron 8 of 19) intron (NM_001356567, intron 8 of 19) 34154 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-13 chrX 162990801 162991204 + 0.781208772652439 NA intron (NM_001168571, intron 14 of 16) intron (NM_001168571, intron 14 of 16) -26403 NM_009789 12309 Mm.6891 NM_009789 ENSMUSG00000040808 S100g AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3 S100 calcium binding protein G protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-2 chr10 24577714 24578238 + 0.781208772652439 NA Intergenic Intergenic -17466 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-11 chr15 38079096 38079427 + 0.781208772652439 NA promoter-TSS (NM_001081359) promoter-TSS (NM_001081359) -407 NM_001081359 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-12 chr15 76701514 76701754 + 0.781208772652439 NA promoter-TSS (NM_027122) promoter-TSS (NM_027122) 92 NM_027122 69572 Mm.34920 NM_027122 ENSMUSG00000019080 Mfsd3 2310010G13Rik major facilitator superfamily domain containing 3 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-7 chr17 87283083 87283341 + 0.781208772652439 NA promoter-TSS (NR_015506) promoter-TSS (NR_015506) 326 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439 chr1 91351391 91351861 + 0.781208772652439 NA intron (NM_027551, intron 1 of 7) intron (NM_027551, intron 1 of 7) 553 NM_027551 70788 Mm.68617 NM_027551 ENSMUSG00000026308 Klhl30 4631423F02Rik kelch-like 30 protein-coding common_peak2_27_14_0.624808498183406_4.21929484470022_0.781208772652439-5 chr9 96363128 96363434 + 0.781208772652439 NA intron (NM_001357213, intron 1 of 7) intron (NM_001357213, intron 1 of 7) 434 NM_001357213 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-9 chr14 60265302 60265621 + 0.781208772652439 NA intron (NM_144843, intron 1 of 13) CpG 256 NM_144843 219135 Mm.247007 NM_144843 ENSMUSG00000021987 Mtmr6 4022440C11Rik|AI428804|AU041072 myotubularin related protein 6 protein-coding common_peak2_27_14_0.624808498183406_4.21929484470022_0.781208772652439-2 chr3 88145182 88145448 + 0.781208772652439 NA intron (NM_001310593, intron 1 of 10) intron (NM_001310593, intron 1 of 10) 2943 NM_133665 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-7 chr13 46217254 46217509 + 0.781208772652439 NA Intergenic Intergenic -56340 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-10 chr6 135001315 135001790 + 0.781208772652439 NA Intergenic Intergenic -10060 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding unique_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-4 chr19 24673387 24673796 + 0.781208772652439 NA promoter-TSS (NM_183160) promoter-TSS (NM_183160) -417 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak2_16_23_-0.76807666381146_4.20092416881543_0.781208772652439-11 chr8 117281056 117281288 + 0.781208772652439 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 24153 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-8 chr13 49315867 49316259 + 0.781208772652439 NA Intergenic Intergenic -6855 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-8 chr3 32334557 32334873 + 0.781208772652439 NA TTS (NM_009517) TTS (NM_009517) -30774 NR_027966 67576 Mm.435324 NR_027966 4930429B21Rik - RIKEN cDNA 4930429B21 gene ncRNA common_peak1_16_23_-0.76807666381146_4.20092416881543_0.781208772652439 chr17 5568416 5568606 + 0.781208772652439 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 75911 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak1_27_14_0.624808498183406_4.21929484470022_0.781208772652439-4 chr11 117235760 117236032 + 0.781208772652439 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -30350 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_38_45_-0.517188179374444_5.26496786636979_0.779916249636879-2 chr11 53858787 53859437 + 0.779916249636879 NA intron (NR_033332, intron 1 of 3) CpG 144 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115 predicted gene 12216 ncRNA unique_peak2_38_45_-0.517188179374444_5.26496786636979_0.779916249636879 chr1 43145031 43146090 + 0.779916249636879 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 18401 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_38_45_-0.517188179374444_5.26496786636979_0.779916249636879-4 chr19 28361036 28361920 + 0.779916249636879 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -316746 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_38_45_-0.517188179374444_5.26496786636979_0.779916249636879 chr11 94958382 94959073 + 0.779916249636879 NA Intergenic Intergenic -8866 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding unique_peak2_38_45_-0.517188179374444_5.26496786636979_0.779916249636879-3 chr11 118363583 118364460 + 0.779916249636879 NA Intergenic Intergenic -8610 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding unique_peak1_38_45_-0.517188179374444_5.26496786636979_0.779916249636879 chr15 101715055 101715747 + 0.779916249636879 NA Intergenic Intergenic -2510 NM_027011 110308 Mm.451847 NM_027011 ENSMUSG00000061527 Krt5 3300001P10Rik|AW146334|CK5|K5|Krt2-5|Tfip8 keratin 5 protein-coding common_peak2_38_45_-0.517188179374444_5.26496786636979_0.779916249636879-2 chr9 22307153 22307650 + 0.779916249636879 NA intron (NM_145612, intron 1 of 7) CpG 237 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding common_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873-2 chr16 33922366 33922971 + 0.779916249636873 NA intron (NM_001145884, intron 10 of 14) intron (NM_001145884, intron 10 of 14) 44370 NM_001348087 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding common_peak2_54_32_0.454438181992486_5.2716132103547_0.779916249636873-3 chr8 117260463 117261130 + 0.779916249636873 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 3777 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873-2 chr8 27008952 27009674 + 0.779916249636873 NA Intergenic Intergenic -14486 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding unique_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873-3 chr8 27259518 27260110 + 0.779916249636873 NA promoter-TSS (NM_007918) promoter-TSS (NM_007918) -513 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873 chr13 40916909 40917509 + 0.779916249636873 NA promoter-TSS (NM_133219) promoter-TSS (NM_133219) -425 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak2_54_32_0.454438181992486_5.2716132103547_0.779916249636873 chr19 41980602 41981036 + 0.779916249636873 NA promoter-TSS (NM_145500) promoter-TSS (NM_145500) 317 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding unique_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873 chr16 4678836 4679609 + 0.779916249636873 NA intron (NM_030205, intron 1 of 27) CpG 498 NM_030205 78885 Mm.325512 NM_030205 ENSMUSG00000039637 Coro7 0610011B16Rik|AW048373|AW556392 coronin 7 protein-coding common_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873-3 chr17 34589681 34590372 + 0.779916249636873 NA 5' UTR (NM_134116, exon 1 of 4) 5' UTR (NM_134116, exon 1 of 4) 220 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak1_54_32_0.454438181992486_5.2716132103547_0.779916249636873-4 chr8 70645050 70645597 + 0.779916249636873 NA Intergenic Intergenic -12867 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak2_54_32_0.454438181992486_5.2716132103547_0.779916249636873-2 chr4 84203224 84203623 + 0.779916249636873 NA Intergenic Intergenic -158544 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_185_179_-0.247622934122683_7.36804162926833_0.779810533685254 chr4 141546193 141547616 + 0.779810533685254 NA non-coding (NR_030695, exon 1 of 1) non-coding (NR_030695, exon 1 of 1) 742 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_219_152_0.227334499511799_7.37105509244855_0.779810533685205 chr8 34964184 34965676 + 0.779810533685205 NA intron (NM_175091, intron 1 of 26) intron (NM_175091, intron 1 of 26) 760 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak2_200_192_-0.237123396973482_7.47389533878134_0.779736164601728 chr2 119476971 119478241 + 0.779736164601728 NA promoter-TSS (NM_026574) promoter-TSS (NM_026574) 23 NM_026574 68142 Mm.330496 NM_026574 ENSMUSG00000034154 Ino80 2310079N15Rik|4632409L19Rik|Inoc1 INO80 complex subunit protein-coding common_peak2_120_121_-0.302426576586562_6.77952404926961_0.779553334302417 chr2 129210723 129212682 + 0.779553334302417 NA TTS (NM_001355252) TTS (NM_001355252) 4606 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_147_99_0.27299459213623_6.78035348584284_0.779553334302392 chr19 6297977 6299085 + 0.779553334302392 NA exon (NM_010119, exon 5 of 5) exon (NM_010119, exon 5 of 5) -7926 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak2_122_81_0.294243165209809_6.50467358722299_0.779241874442524 chr8 83899546 83901252 + 0.779241874442524 NA 5' UTR (NM_181039, exon 1 of 23) 5' UTR (NM_181039, exon 1 of 23) 301 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding common_peak2_320_296_-0.188372461117398_8.12013289024207_0.778912757471696 chr10 43577925 43581060 + 0.778912757471696 NA intron (NM_009846, intron 1 of 1) CpG 323 NM_009846 12484 Mm.29742 NM_009846 ENSMUSG00000047139 Cd24a Cd24|HSA|Ly-52|nectadrin CD24a antigen protein-coding common_peak2_266_249_-0.203696435607947_7.86393606685811_0.778570469508417 chr16 23986958 23989383 + 0.778570469508417 NA intron (NM_009744, intron 1 of 9) CpG 682 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_132_132_-0.291514910955157_6.90952498002361_0.778398884840272 chr1 167283615 167285029 + 0.778398884840272 NA intron (NM_030724, intron 1 of 6) CpG 805 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak1_132_132_-0.291514910955157_6.90952498002361_0.778398884840272-2 chr5 117357376 117358689 + 0.778398884840272 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 727 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak2_109_111_-0.31557760027991_6.64956612191765_0.778328077464194 chr15 55071335 55072724 + 0.778328077464194 NA 5' UTR (NM_001081288, exon 1 of 26) 5' UTR (NM_001081288, exon 1 of 26) 123 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding common_peak2_109_111_-0.31557760027991_6.64956612191765_0.778328077464194-2 chr8 126883631 126885145 + 0.778328077464194 NA Intergenic Intergenic 35368 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_172_167_-0.251880382911906_7.26637723132281_0.778193544088481 chr19 5609328 5610535 + 0.778193544088481 NA promoter-TSS (NR_037603) promoter-TSS (NR_037603) 163 NM_001199249 81601 Mm.228930 NM_178637 ENSMUSG00000024926 Kat5 AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60 K(lysine) acetyltransferase 5 protein-coding common_peak1_189_130_0.241287392615088_7.15406669784499_0.777842673757142 chr5 113215340 113217545 + 0.777842673757142 NA Intergenic Intergenic -10467 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak1_100_65_0.32510377989896_6.20694600930793_0.777585324479293-2 chr17 24669738 24670681 + 0.777585324479293 NA intron (NM_001348231, intron 1 of 11) intron (NM_001348231, intron 1 of 11) 522 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding common_peak1_101_65_0.339217360632208_6.21400279967456_0.777585324479293 chr1 6280585 6281294 + 0.777585324479293 NA Intergenic Intergenic 66277 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak1_100_65_0.32510377989896_6.20694600930793_0.777585324479293 chr12 78860579 78861524 + 0.777585324479293 NA intron (NM_023721, intron 1 of 8) intron (NM_023721, intron 1 of 8) 587 NM_023721 73834 Mm.311549 NM_023721 ENSMUSG00000021114 Atp6v1d 1110004P10Rik|Atp6m|VATD|Vma8 ATPase, H+ transporting, lysosomal V1 subunit D protein-coding common_peak1_101_65_0.339217360632208_6.21400279967456_0.777585324479293-2 chr17 34654149 34655704 + 0.777585324479293 NA 3' UTR (NM_017406, exon 18 of 18) 3' UTR (NM_017406, exon 18 of 18) 7780 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak1_78_83_-0.374749756503484_6.20494254452702_0.777585324479293 chr11 50252403 50253059 + 0.777585324479293 NA Intergenic Intergenic -14199 NR_132733 17001 Mm.245151 NM_008521 ENSMUSG00000020377 Ltc4s - leukotriene C4 synthase protein-coding common_peak1_101_65_0.339217360632208_6.21400279967456_0.777585324479293-3 chr4 62965739 62967226 + 0.777585324479293 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 908 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_78_83_-0.374749756503484_6.20494254452702_0.777585324479293 chr8 110807592 110808639 + 0.777585324479293 NA Intergenic Intergenic -2191 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544 chr1 155158739 155159133 + 0.777451270049544 NA intron (NM_021433, intron 1 of 7) CpG 233 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544-4 chr8 122568119 122568497 + 0.777451270049544 NA intron (NM_026014, intron 1 of 9) CpG 293 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding common_peak1_32_39_-0.554862110489604_5.04449703964256_0.777451270049544 chr1 6307101 6307743 + 0.777451270049544 NA Intergenic Intergenic -51909 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544 chr11 60454653 60455094 + 0.777451270049544 NA intron (NM_021354, intron 1 of 12) CpG 282 NM_021354 13495 Mm.41803 NM_021354 ENSMUSG00000020537 Drg2 AI255295|AI461605|DRG-2 developmentally regulated GTP binding protein 2 protein-coding common_peak2_46_27_0.466306381244451_5.04050811267983_0.777451270049544-2 chr8 35920793 35921126 + 0.777451270049544 NA Intergenic Intergenic -38002 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_46_27_0.466306381244451_5.04050811267983_0.777451270049544 chr11 48826227 48826678 + 0.777451270049544 NA intron (NM_053166, intron 1 of 6) intron (NM_053166, intron 1 of 6) 314 NM_053166 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding unique_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544 chr15 25369806 25370659 + 0.777451270049544 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 43532 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544-2 chr15 101413500 101414195 + 0.777451270049544 NA intron (NM_033073, intron 1 of 8) intron (NM_033073, intron 1 of 8) 1444 NM_033073 110310 Mm.486285 NM_033073 ENSMUSG00000023039 Krt7 D15Wsu77e|K7|Krt2-7 keratin 7 protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-2 chr13 75789785 75790260 + 0.777451270049544 NA Intergenic Intergenic -49863 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544 chr17 36023931 36024410 + 0.777451270049544 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -3610 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak1_32_39_-0.554862110489604_5.04449703964256_0.777451270049544-2 chr1 75124715 75125146 + 0.777451270049544 NA TTS (NM_194333) TTS (NM_194333) 8960 NM_194333 22626 Mm.68157 NM_194333 ENSMUSG00000026205 Slc23a3 SVCT3|Yspl1 solute carrier family 23 (nucleobase transporters), member 3 protein-coding unique_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544-3 chrX 74269555 74270126 + 0.777451270049544 NA promoter-TSS (NM_052835) promoter-TSS (NM_052835) -976 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-3 chr15 76476625 76477158 + 0.777451270049544 NA promoter-TSS (NM_001331154) promoter-TSS (NM_001331154) 378 NM_013481 12181 Mm.4283 NM_013481 ENSMUSG00000022557 Bop1 AU020183|AW146150|D18861|Erb1p|Kiaa0124|mKIAA0124 block of proliferation 1 protein-coding common_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544-2 chr2 109917699 109918223 + 0.777451270049544 NA 5' UTR (NM_172671, exon 1 of 18) 5' UTR (NM_172671, exon 1 of 18) 314 NM_172671 107515 Mm.277351 NM_172671 ENSMUSG00000050199 Lgr4 9130225G07|A330106J01Rik|A930009A08Rik|Gpr48 leucine-rich repeat-containing G protein-coupled receptor 4 protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-8 chr8 36163780 36164147 + 0.777451270049544 NA Intergenic Intergenic 7953 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-4 chr18 54988199 54988779 + 0.777451270049544 NA exon (NM_175751, exon 2 of 10) exon (NM_175751, exon 2 of 10) 1691 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-9 chr9 35210546 35210902 + 0.777451270049544 NA promoter-TSS (NM_026130) promoter-TSS (NM_026130) 331 NM_172291 235169 Mm.138512 NM_172291 ENSMUSG00000039048 Foxred1 BC024806|TEG-23|Tex23 FAD-dependent oxidoreductase domain containing 1 protein-coding common_peak2_32_39_-0.554862110489604_5.04449703964256_0.777451270049544-3 chr8 14888624 14889012 + 0.777451270049544 NA 5' UTR (NM_012000, exon 1 of 3) 5' UTR (NM_012000, exon 1 of 3) 282 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding unique_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-2 chr4 133117572 133118253 + 0.777451270049544 NA Intergenic Intergenic -12721 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-5 chr3 93024665 93025380 + 0.777451270049544 NA Intergenic Intergenic -5961 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding common_peak2_46_27_0.466306381244451_5.04050811267983_0.777451270049544-3 chrX 12762307 12762886 + 0.777451270049544 NA promoter-TSS (NM_012005) promoter-TSS (NM_012005) 318 NR_045852 552913 Mm.216846 NR_045852 ENSMUSG00000085891 Gm14634 - predicted gene 14634 ncRNA unique_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-3 chr9 70048126 70048810 + 0.777451270049544 NA Intergenic Intergenic -10380 NM_028087 72077 Mm.195555 NM_028087 ENSMUSG00000032226 Gcnt3 2010013H22Rik|2210021I22Rik|2210401J11Rik glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-6 chr6 129533298 129533712 + 0.777451270049544 NA promoter-TSS (NR_045270) promoter-TSS (NR_045270) -221 NR_045270 100504641 Mm.398286 NR_045270 ENSMUSG00000097675 1700101I11Rik - RIKEN cDNA 1700101I11 gene ncRNA common_peak1_46_27_0.466306381244451_5.04050811267983_0.777451270049544-7 chr7 127471672 127472036 + 0.777451270049544 NA 5' UTR (NM_145589, exon 1 of 11) 5' UTR (NM_145589, exon 1 of 11) 240 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding common_peak2_112_73_0.320869336031302_6.3698880336446_0.777177389510743-2 chr5 20950831 20951820 + 0.777177389510743 NA exon (NM_001080977, exon 1 of 8) exon (NM_001080977, exon 1 of 8) 336 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_112_73_0.320869336031302_6.3698880336446_0.777177389510743 chr12 84188753 84190021 + 0.777177389510743 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 4628 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_112_73_0.320869336031302_6.3698880336446_0.777177389510743 chr15 85675226 85676286 + 0.777177389510743 NA Intergenic Intergenic -28017 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_71_44_0.392803172769786_5.68825468271457_0.777071856700052 chr18 10609227 10610014 + 0.777071856700052 NA intron (NM_001081222, intron 1 of 10) CpG 732 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak2_52_59_-0.461120540338658_5.67633032543919_0.777071856700052-3 chr2 155691789 155692383 + 0.777071856700052 NA intron (NM_019828, intron 1 of 18) CpG 298 NM_019828 56407 Mm.234944 NM_019828 ENSMUSG00000038324 Trpc4ap 4833429F06Rik|D2Ertd113e|Trrp4ap|mFLJ00177|truss transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding common_peak1_71_44_0.392803172769786_5.68825468271457_0.777071856700052-2 chr8 47532817 47533435 + 0.777071856700052 NA promoter-TSS (NM_203507) promoter-TSS (NM_203507) 344 NM_177240 320714 Mm.39461 NM_177240 ENSMUSG00000038102 Trappc11 AW558465|D030016E14Rik|R75422 trafficking protein particle complex 11 protein-coding common_peak1_71_44_0.392803172769786_5.68825468271457_0.777071856700052 chr2 91526842 91527610 + 0.777071856700052 NA intron (NM_001165989, intron 1 of 43) intron (NM_001165989, intron 1 of 43) 464 NM_001165989 75786 Mm.168478 NM_029437 ENSMUSG00000040549 Ckap5 3110043H24Rik|4930432B04Rik|D730027C18Rik|T25636|mKIAA0097 cytoskeleton associated protein 5 protein-coding common_peak2_53_59_-0.434343744708359_5.68971872325434_0.777071856700052-3 chr5 134314957 134315794 + 0.777071856700052 NA promoter-TSS (NM_001080749) promoter-TSS (NM_001080749) -615 NM_010365 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak2_52_59_-0.461120540338658_5.67633032543919_0.777071856700052 chr16 92399110 92399981 + 0.777071856700052 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) 533 NM_019466 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding common_peak2_53_59_-0.434343744708359_5.68971872325434_0.777071856700052 chr11 4160347 4161004 + 0.777071856700052 NA promoter-TSS (NM_001164620) promoter-TSS (NM_001164620) 321 NM_026175 67465 Mm.156914 NM_026175 ENSMUSG00000002129 Sf3a1 1200014H24Rik|5930416L09Rik|AI159724 splicing factor 3a, subunit 1 protein-coding common_peak2_52_59_-0.461120540338658_5.67633032543919_0.777071856700052-2 chr2 148197162 148197745 + 0.777071856700052 NA Intergenic Intergenic -150484 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak1_53_59_-0.434343744708359_5.68971872325434_0.777071856700052 chr12 84970554 84971412 + 0.777071856700052 NA promoter-TSS (NM_178065) promoter-TSS (NM_178065) 53 NM_028632 73736 Mm.341848 NM_028632 ENSMUSG00000021243 Fcf1 1110008B24Rik FCF1 rRNA processing protein protein-coding common_peak1_53_59_-0.434343744708359_5.68971872325434_0.777071856700052-2 chr4 132260526 132261194 + 0.777071856700052 NA intron (NM_001122992, intron 1 of 10) intron (NM_001122992, intron 1 of 10) 689 NM_020273 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding common_peak2_53_59_-0.434343744708359_5.68971872325434_0.777071856700052-2 chr16 22009522 22010161 + 0.777071856700052 NA intron (NM_001357424, intron 1 of 15) CpG 357 NM_001357424 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding unique_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355 chr10 127043058 127043464 + 0.776879508296355 NA intron (NM_010792, intron 2 of 5) intron (NM_010792, intron 2 of 5) 1329 NM_010792 17299 Mm.251593 NM_010792 ENSMUSG00000006732 Mettl1 2810012D02Rik methyltransferase like 1 protein-coding common_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355 chr1 153752003 153752552 + 0.776879508296355 NA intron (NM_011882, intron 2 of 8) intron (NM_011882, intron 2 of 8) 2851 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding common_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-2 chr17 10319989 10320298 + 0.776879508296355 NA promoter-TSS (NM_001159517) promoter-TSS (NM_001159517) 224 NR_037588 100526796 Mm.384135 NR_037588 Cahm B930003M22Rik colon adenocarcinoma hypermethylated RNA ncRNA common_peak1_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-3 chr13 33004235 33004638 + 0.776879508296355 NA promoter-TSS (NM_009256) promoter-TSS (NM_009256) -105 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-4 chr7 37850945 37851527 + 0.776879508296355 NA Intergenic L2b|LINE|L2 -81484 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-2 chr11 116328693 116328913 + 0.776879508296355 NA Intergenic Intergenic 6551 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding unique_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-6 chr9 102713962 102714565 + 0.776879508296355 NA Intergenic Intergenic -3541 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-5 chr6 71823248 71823723 + 0.776879508296355 NA intron (NM_025430, intron 1 of 3) intron (NM_025430, intron 1 of 3) 299 NM_025430 66223 Mm.28579 NM_025430 ENSMUSG00000052962 Mrpl35 1110066C01Rik mitochondrial ribosomal protein L35 protein-coding unique_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-4 chr15 96830066 96830362 + 0.776879508296355 NA Intergenic Intergenic -130486 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-5 chr9 110333490 110333868 + 0.776879508296355 NA intron (NM_001001144, intron 1 of 22) CpG 323 NM_001001144 235623 Mm.288741 NM_001001144 ENSMUSG00000032485 Scap 9530044G19|mKIAA0199 SREBF chaperone protein-coding common_peak1_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-4 chr17 70854021 70854461 + 0.776879508296355 NA promoter-TSS (NM_001164074) promoter-TSS (NM_001164074) -709 NM_001164074 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_21_28_-0.671750612957267_4.52210568864894_0.776879508296355 chr11 31157391 31157713 + 0.776879508296355 NA Intergenic Intergenic -171187 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding unique_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-2 chr11 100056126 100056482 + 0.776879508296355 NA Intergenic Intergenic -5753 NM_010659 16660 Mm.439673 NM_010659 ENSMUSG00000048981 Krt31 Ha1|Kha1|Krt1-1|MKHA-1 keratin 31 protein-coding unique_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-3 chr15 78529082 78529516 + 0.776879508296355 NA intron (NM_001204152, intron 1 of 3) intron (NM_001204152, intron 1 of 3) 352 NM_001204153 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-3 chr4 134670316 134670656 + 0.776879508296355 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 33804 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_21_28_-0.671750612957267_4.52210568864894_0.776879508296355-5 chr8 46616661 46617070 + 0.776879508296355 NA promoter-TSS (NM_009810) promoter-TSS (NM_009810) 362 NM_001001184 408022 Mm.217385 NM_001001184 ENSMUSG00000038225 Primpol BC065112|Ccdc111 primase and polymerase (DNA-directed) protein-coding common_peak2_33_18_0.561903343892866_4.52887918539002_0.776879508296351-3 chr8 41239151 41239362 + 0.776879508296351 NA promoter-TSS (NM_023662) promoter-TSS (NM_023662) -503 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-5 chr8 115702287 115702708 + 0.776879508296351 NA TTS (NM_001025577) TTS (NM_001025577) 4397 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_33_18_0.561903343892866_4.52887918539002_0.776879508296351 chr11 68871426 68871708 + 0.776879508296351 NA Intergenic Intergenic -16986 NM_177060 320040 Mm.305696 NM_177060 ENSMUSG00000046490 Rnf222 9930039A11Rik ring finger protein 222 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-16 chr9 21287562 21287897 + 0.776879508296351 NA TTS (NM_009878) TTS (NM_009878) 240 NM_145416 215194 Mm.290690 NM_145416 ENSMUSG00000035047 Kri1 - KRI1 homolog protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-11 chr3 89266567 89266985 + 0.776879508296351 NA exon (NM_026767, exon 2 of 2) exon (NM_026767, exon 2 of 2) 315 NM_026767 68563 Mm.272927 NM_026767 ENSMUSG00000042737 Dpm3 1110001H19Rik|AV117483 dolichyl-phosphate mannosyltransferase polypeptide 3 protein-coding common_peak2_33_18_0.561903343892866_4.52887918539002_0.776879508296351-4 chr8 115708056 115708357 + 0.776879508296351 NA Intergenic CpG -1312 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-3 chr11 107469321 107469621 + 0.776879508296351 NA intron (NR_153311, intron 1 of 9) CpG 1249 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351 chr1 105989909 105990160 + 0.776879508296351 NA promoter-TSS (NM_001122676) promoter-TSS (NM_001122676) 248 NR_151625 635504 Mm.359717 NR_151625 Gm7160 EG635504 predicted gene 7160 ncRNA unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-3 chr3 88774757 88775056 + 0.776879508296351 NA Intergenic Intergenic -2151 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-14 chr7 25297371 25297885 + 0.776879508296351 NA 5' UTR (NM_001357350, exon 1 of 5) 5' UTR (NM_001357350, exon 1 of 5) 327 NM_008776 18476 Mm.597 NM_008776 ENSMUSG00000005447 Pafah1b3 Pafahg|mus[g] platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 protein-coding unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-4 chr3 152111335 152111626 + 0.776879508296351 NA intron (NM_016867, intron 3 of 5) intron (NM_016867, intron 3 of 5) 54420 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak2_33_18_0.561903343892866_4.52887918539002_0.776879508296351-2 chr7 16308649 16309036 + 0.776879508296351 NA promoter-TSS (NM_133234) promoter-TSS (NM_133234) -741 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-8 chr19 46348492 46348835 + 0.776879508296351 NA non-coding (NR_040418, exon 1 of 1) non-coding (NR_040418, exon 1 of 1) 325 NR_040418 75579 Mm.436708 NR_040418 2310034G01Rik - RIKEN cDNA 2310034G01 gene ncRNA common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-2 chr11 59336119 59336594 + 0.776879508296351 NA Intergenic Intergenic 29426 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-17 chr9 45659698 45660204 + 0.776879508296351 NA intron (NM_001081270, intron 3 of 32) intron (NM_001081270, intron 3 of 32) 168687 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-9 chr2 137049073 137049482 + 0.776879508296351 NA intron (NM_001355671, intron 5 of 6) intron (NM_001355671, intron 5 of 6) 67243 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-12 chr4 135874064 135874425 + 0.776879508296351 NA promoter-TSS (NM_026383) promoter-TSS (NM_026383) -398 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-5 chr12 73812842 73813614 + 0.776879508296351 NA Intergenic Intergenic -88096 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-6 chr17 35591152 35591754 + 0.776879508296351 NA Intergenic Intergenic 23968 NM_175148 69542 Mm.265291 NM_175148 ENSMUSG00000039269 2300002M23Rik Stg|emprin RIKEN cDNA 2300002M23 gene protein-coding unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351 chr11 95258826 95259118 + 0.776879508296351 NA Intergenic CpG -2557 NM_053093 93670 Mm.40085 NM_053093 ENSMUSG00000020872 Tac4 AW489379|PPT-C tachykinin 4 protein-coding unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-6 chr9 65630002 65630419 + 0.776879508296351 NA promoter-TSS (NM_028030) promoter-TSS (NM_028030) -372 NM_028030 71973 Mm.29148 NM_028030 ENSMUSG00000032387 Rbpms2 2400008B06Rik|AI316523 RNA binding protein with multiple splicing 2 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-7 chr19 9060896 9061158 + 0.776879508296351 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 26929 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-2 chr13 63088988 63089520 + 0.776879508296351 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) 124361 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-15 chr8 34047929 34048298 + 0.776879508296351 NA Intergenic Intergenic 59701 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_33_18_0.561903343892866_4.52887918539002_0.776879508296351-5 chr9 18473811 18474246 + 0.776879508296351 NA promoter-TSS (NM_028935) promoter-TSS (NM_028935) -383 NM_028160 72230 Mm.289689 NM_028160 ENSMUSG00000074500 Zfp558 1700007A21Rik|4932704I17Rik|Zfp558-ps zinc finger protein 558 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-4 chr11 118402075 118402407 + 0.776879508296351 NA promoter-TSS (NM_011150) promoter-TSS (NM_011150) -282 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-13 chr6 52215198 52215794 + 0.776879508296351 NA promoter-TSS (NR_045199) promoter-TSS (NR_045199) -208 NR_045199 100736249 Mm.294826 NR_045199 Mira - mistral long non-coding RNA ncRNA unique_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-7 chrX 73673209 73673517 + 0.776879508296351 NA 5' UTR (NM_001142810, exon 1 of 13) 5' UTR (NM_001142810, exon 1 of 13) 230 NM_001142809 102857 Mm.274553 NM_133987 ENSMUSG00000019558 Slc6a8 AA589632|CRT|CRTR|CT1|CTR5|Creat solute carrier family 6 (neurotransmitter transporter, creatine), member 8 protein-coding common_peak1_33_18_0.561903343892866_4.52887918539002_0.776879508296351-10 chr3 21952650 21952961 + 0.776879508296351 NA Intergenic Intergenic -123847 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_62_38_0.407968079384585_5.48938625855454_0.775854296331407-2 chr11 100622929 100623465 + 0.775854296331407 NA intron (NM_028024, intron 1 of 3) intron (NM_028024, intron 1 of 3) 242 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding common_peak1_62_38_0.407968079384585_5.48938625855454_0.775854296331407-2 chr17 57030453 57031470 + 0.775854296331407 NA intron (NM_010613, intron 1 of 17) intron (NM_010613, intron 1 of 17) 546 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak2_62_38_0.407968079384585_5.48938625855454_0.775854296331407 chr1 193396888 193397796 + 0.775854296331407 NA Intergenic Intergenic -27060 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_62_38_0.407968079384585_5.48938625855454_0.775854296331407 chr6 125131954 125132529 + 0.775854296331407 NA exon (NM_138747, exon 2 of 16) exon (NM_138747, exon 2 of 16) 358 NM_138747 110109 Mm.29203 NM_138747 ENSMUSG00000038279 Nop2 120kDa|A530002O17|Nol1 NOP2 nucleolar protein protein-coding unique_peak2_45_52_-0.485067152766944_5.48538687817973_0.775854296331407 chrX 73474245 73475317 + 0.775854296331407 NA Intergenic Intergenic -8820 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak1_62_38_0.407968079384585_5.48938625855454_0.775854296331407-3 chr2 129211666 129212442 + 0.775854296331407 NA TTS (NM_001355252) TTS (NM_001355252) 4958 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_62_38_0.407968079384585_5.48938625855454_0.775854296331407-4 chr3 101513850 101514769 + 0.775854296331407 NA Intergenic MIR|SINE|MIR 90398 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_45_52_-0.485067152766944_5.48538687817973_0.775854296331407-3 chr5 138170233 138171233 + 0.775854296331407 NA intron (NM_008568, intron 1 of 14) intron (NM_008568, intron 1 of 14) 533 NM_001356577 17220 Mm.378965 NM_008568 ENSMUSG00000029730 Mcm7 AI747533|Mcmd7|mCDC47 minichromosome maintenance complex component 7 protein-coding common_peak2_62_38_0.407968079384585_5.48938625855454_0.775854296331407-4 chr17 87827509 87828097 + 0.775854296331407 NA Intergenic Intergenic -29809 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_45_52_-0.485067152766944_5.48538687817973_0.775854296331407-2 chr2 32137311 32137942 + 0.775854296331407 NA Intergenic Intergenic -13522 NM_172661 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_62_38_0.407968079384585_5.48938625855454_0.775854296331407-3 chr14 56886687 56887240 + 0.775854296331407 NA intron (NM_001360643, intron 1 of 24) CpG-4519 120 NM_001360643 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak2_45_52_-0.485067152766944_5.48538687817973_0.775854296331407 chr10 94544881 94545570 + 0.775854296331407 NA intron (NM_172051, intron 1 of 3) MER129|LTR?|LTR? -5647 NM_001359761 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_62_38_0.407968079384585_5.48938625855454_0.775854296331407 chr10 10557542 10558157 + 0.775854296331407 NA exon (NM_026405, exon 1 of 3) exon (NM_026405, exon 1 of 3) 358 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding common_peak2_254_178_0.21239762190704_7.59001458821778_0.775819386088857 chr1 58710598 58712581 + 0.775819386088857 NA promoter-TSS (NM_001289704) promoter-TSS (NM_001289704) 98 NR_149256 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_253_178_0.206768864736416_7.58720020963246_0.775819386088857 chr17 30003567 30005851 + 0.775819386088857 NA promoter-TSS (NM_148926) promoter-TSS (NM_148926) -330 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_148_100_0.268285913773472_6.79235443963853_0.775228047345357 chr2 122147693 122149221 + 0.775228047345357 NA intron (NM_009735, intron 1 of 3) intron (NM_009735, intron 1 of 3) 770 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak1_149_100_0.277868002054724_6.79714548377916_0.775228047345357 chr15 102670178 102671075 + 0.775228047345357 NA intron (NM_026468, intron 1 of 4) intron (NM_026468, intron 1 of 4) 421 NM_026468 67942 Mm.10314 NM_026468 ENSMUSG00000062683 Atp5g2 1810041M08Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) protein-coding common_peak1_148_100_0.268285913773472_6.79235443963853_0.775228047345357-2 chr5 31192671 31194230 + 0.775228047345357 NA promoter-TSS (NM_001127355) promoter-TSS (NM_001127355) 146 NM_153680 266781 Mm.6118 NM_153680 ENSMUSG00000029146 Snx17 5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064 sorting nexin 17 protein-coding common_peak2_90_58_0.337499195094157_6.05139264690892_0.774169551378916 chr6 31220017 31221034 + 0.774169551378916 NA intron (NR_040260, intron 1 of 5) CpG 174 NR_040259 73652 Mm.441297 NR_040257 ENSMUSG00000087380 2210408F21Rik - RIKEN cDNA 2210408F21 gene ncRNA common_peak1_90_58_0.337499195094157_6.05139264690892_0.774169551378916-4 chr9 78021297 78022100 + 0.774169551378916 NA Intergenic Intergenic -30260 NM_008103 14531 Mm.1400 NM_008103 ENSMUSG00000023333 Gcm1 GCMa|Gcm-rs2|Gcm1-rs1|glide glial cells missing homolog 1 protein-coding common_peak1_70_75_-0.383306771736854_6.05627412757516_0.774169551378916-3 chr5 145114310 145114997 + 0.774169551378916 NA intron (NM_023142, intron 1 of 9) CpG 397 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak1_90_58_0.337499195094157_6.05139264690892_0.774169551378916 chr2 104590614 104591401 + 0.774169551378916 NA intron (NM_001037326, intron 1 of 1) CpG 523 NM_001037326 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding common_peak1_90_58_0.337499195094157_6.05139264690892_0.774169551378916-2 chr2 173663625 173664711 + 0.774169551378916 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 4323 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_70_75_-0.383306771736854_6.05627412757516_0.774169551378916-2 chr5 114380621 114381374 + 0.774169551378916 NA promoter-TSS (NM_026145) promoter-TSS (NM_026145) 377 NR_138602 117146 Mm.28792 NM_054093 ENSMUSG00000029577 Ube3b AI449831|AU020130 ubiquitin protein ligase E3B protein-coding common_peak2_70_75_-0.383306771736854_6.05627412757516_0.774169551378916 chr9 56418590 56419781 + 0.774169551378916 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 566 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_70_75_-0.383306771736854_6.05627412757516_0.774169551378916 chr15 99473993 99474635 + 0.774169551378916 NA intron (NM_029236, intron 1 of 1) intron (NM_029236, intron 1 of 1) 416 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding common_peak2_90_58_0.337499195094157_6.05139264690892_0.774169551378916-2 chr8 112011441 112012307 + 0.774169551378916 NA promoter-TSS (NM_001130868) promoter-TSS (NM_001130868) 515 NM_020584 57321 Mm.213064 NM_020584 ENSMUSG00000033430 Terf2ip Rap1 telomeric repeat binding factor 2, interacting protein protein-coding common_peak1_90_58_0.337499195094157_6.05139264690892_0.774169551378916-3 chr7 134108640 134110045 + 0.774169551378916 NA intron (NM_007400, intron 3 of 22) intron (NM_007400, intron 3 of 22) 115755 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_124_82_0.299861349986019_6.52497010633993_0.774023179262122 chr17 66750943 66752075 + 0.774023179262122 NA intron (NM_001357625, intron 20 of 32) intron (NM_001357625, intron 20 of 32) 37053 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA common_peak2_99_102_-0.331256644604155_6.52087220488114_0.774023179262098 chr1 64736459 64737547 + 0.774023179262098 NA intron (NM_001042659, intron 1 of 1) CpG 747 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_99_102_-0.331256644604155_6.52087220488114_0.774023179262098-2 chr5 125393501 125394197 + 0.774023179262098 NA Intergenic Intergenic -3832 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_136_91_0.282653618058767_6.6648887650864_0.773608659349739 chr7 141447071 141448462 + 0.773608659349739 NA intron (NM_026020, intron 1 of 4) CpG 115 NM_001360658 67186 Mm.380435 NM_026020 ENSMUSG00000025508 Rplp2 2700049I22Rik ribosomal protein, large P2 protein-coding common_peak2_136_91_0.282653618058767_6.6648887650864_0.773608659349739 chr3 58576726 58577621 + 0.773608659349739 NA intron (NM_001040396, intron 1 of 5) CpG 537 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding common_peak2_110_112_-0.315437598703535_6.66246016306342_0.773608659349739 chr13 73763760 73765151 + 0.773608659349739 NA intron (NM_001360694, intron 1 of 24) intron (NM_001360694, intron 1 of 24) 758 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak2_61_67_-0.417013301697557_5.87895619040156_0.773583383841054 chr12 80260585 80261572 + 0.773583383841054 NA promoter-TSS (NM_001346669) promoter-TSS (NM_001346669) -697 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_61_67_-0.417013301697557_5.87895619040156_0.773583383841054-3 chr16 16870792 16871476 + 0.773583383841054 NA intron (NM_011624, intron 1 of 17) intron (NM_011624, intron 1 of 17) 398 NM_011624 21976 Mm.326089 NM_011624 ENSMUSG00000022779 Top3b - topoisomerase (DNA) III beta protein-coding common_peak2_61_67_-0.417013301697557_5.87895619040156_0.773583383841054-4 chr9 96863414 96864318 + 0.773583383841054 NA intron (NM_001289645, intron 1 of 6) intron (NM_001289645, intron 1 of 6) 25608 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak2_61_67_-0.417013301697557_5.87895619040156_0.773583383841054-2 chr13 29983494 29984162 + 0.773583383841054 NA intron (NM_010093, intron 1 of 6) intron (NM_010093, intron 1 of 6) 563 NM_001289920 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak2_81_51_0.370519849459346_5.88569964287077_0.773583383841042 chr3 85574168 85574690 + 0.773583383841042 NA intron (NM_144896, intron 1 of 12) intron (NM_144896, intron 1 of 12) 300 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding common_peak1_81_51_0.370519849459346_5.88569964287077_0.773583383841042 chr12 75595449 75596170 + 0.773583383841042 NA 5' UTR (NM_012024, exon 1 of 14) 5' UTR (NM_012024, exon 1 of 14) 391 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_81_51_0.370519849459346_5.88569964287077_0.773583383841042-2 chr3 83844010 83844754 + 0.773583383841042 NA Intergenic Intergenic -2774 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak1_252_237_-0.209884082705669_7.78987572195511_0.772472758428197 chr2 164910499 164912404 + 0.772472758428197 NA intron (NM_199027, intron 1 of 27) CpG 299 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak1_177_121_0.250514909263797_7.05599479219478_0.771883630780981 chr11 113060151 113061792 + 0.771883630780981 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 140867 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_189_182_-0.240989444131505_7.39520511621829_0.771267770463388 chr8 123373147 123374983 + 0.771267770463388 NA intron (NM_001359076, intron 1 of 16) CpG 354 NM_001286363 66855 Mm.178818 NM_025804 ENSMUSG00000001472 Tcf25 1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding unique_peak1_102_66_0.331498174600455_6.231838277758_0.771200261870372 chr4 54875949 54877464 + 0.771200261870372 NA Intergenic Intergenic -71239 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_79_84_-0.373803952312516_6.22248895998144_0.771200261870372-2 chr16 32332279 32332981 + 0.771200261870372 NA intron (NM_177633, intron 1 of 10) CpG 378 NM_177633 224111 Mm.31275 NM_177633 ENSMUSG00000053774 Ubxn7 A630090P18|AI196514|Ubxd7|mKIAA0794 UBX domain protein 7 protein-coding common_peak2_80_84_-0.356008483010088_6.23138669463266_0.771200261870372 chr17 5569303 5570325 + 0.771200261870372 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 77214 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak2_79_84_-0.373803952312516_6.22248895998144_0.771200261870372-3 chr2 157077899 157079152 + 0.771200261870372 NA exon (NM_001164663, exon 1 of 15) exon (NM_001164663, exon 1 of 15) 740 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak1_102_66_0.331498174600455_6.231838277758_0.771200261870372 chr15 75928690 75929604 + 0.771200261870372 NA intron (NM_001357005, intron 1 of 10) intron (NM_001357005, intron 1 of 10) 583 NM_031201 22122 Mm.22596 NM_031201 ENSMUSG00000022570 Tsta3 AI256181|FX|Tstap35b tissue specific transplantation antigen P35B protein-coding common_peak2_79_84_-0.373803952312516_6.22248895998144_0.771200261870372 chr10 128564987 128565938 + 0.771200261870372 NA intron (NM_011119, intron 1 of 11) CpG 472 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding common_peak1_79_84_-0.373803952312516_6.22248895998144_0.771200261870372-2 chr18 38600304 38601316 + 0.771200261870372 NA intron (NM_011898, intron 1 of 1) CpG 458 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak2_79_84_-0.373803952312516_6.22248895998144_0.771200261870372-4 chr8 107095922 107096710 + 0.771200261870372 NA promoter-TSS (NR_106043) promoter-TSS (NR_106043) -210 NR_106043 102465652 NR_106043 ENSMUSG00000098671 Mir7075 Gm27821|mmu-mir-7075 microRNA 7075 ncRNA common_peak1_79_84_-0.373803952312516_6.22248895998144_0.771200261870372 chr13 95548959 95549910 + 0.771200261870372 NA Intergenic Intergenic -24194 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-8 chr2 60696805 60697203 + 0.771068449301683 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -23311 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-11 chr7 35396539 35396747 + 0.771068449301683 NA promoter-TSS (NM_028120) promoter-TSS (NM_028120) 124 NM_178643 101831 Mm.389855 NM_178643 ENSMUSG00000030493 Faap24 AW124591|AW538696|C230052I12Rik Fanconi anemia core complex associated protein 24 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-15 chr18 38068344 38068622 + 0.771068449301683 NA Intergenic Intergenic -69514 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-24 chr5 104436423 104436665 + 0.771068449301683 NA exon (NM_001204202, exon 3 of 7) exon (NM_001204202, exon 3 of 7) 352 NM_001204233 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-11 chr15 58761363 58761633 + 0.771068449301683 NA Intergenic Intergenic 61929 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-33 chr9 57565925 57566211 + 0.771068449301683 NA intron (NM_022813, intron 1 of 8) intron (NM_022813, intron 1 of 8) 5124 NM_022813 24044 Mm.286069 NM_022813 ENSMUSG00000040188 Scamp2 AI875466|Sc2 secretory carrier membrane protein 2 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-7 chr12 84451647 84451872 + 0.771068449301683 NA promoter-TSS (NM_134042) promoter-TSS (NM_134042) 251 NM_173756 217708 Mm.311904 NM_173756 ENSMUSG00000085793 Lin52 5830457H20Rik lin-52 homolog (C. elegans) protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-10 chr15 4026699 4026915 + 0.771068449301683 NA non-coding (NR_028266, exon 1 of 2) non-coding (NR_028266, exon 1 of 2) 379 NM_024188 67041 Mm.13445 NM_024188 ENSMUSG00000022186 Oxct1 2610008O03Rik|Oxct|Oxct2a|Scot-s 3-oxoacid CoA transferase 1 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-17 chr18 75458582 75458815 + 0.771068449301683 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -55947 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683 chr1 179517408 179517784 + 0.771068449301683 NA intron (NM_027188, intron 1 of 11) intron (NM_027188, intron 1 of 11) 445 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-29 chr7 79278528 79278763 + 0.771068449301683 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 5379 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-10 chr5 148966074 148966276 + 0.771068449301683 NA Intergenic Intergenic 15925 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-5 chr17 46153053 46153346 + 0.771068449301683 NA intron (NM_025649, intron 1 of 2) intron (NM_025649, intron 1 of 2) 352 NM_025649 66591 Mm.272024 NM_025649 ENSMUSG00000034509 Mad2l1bp 0610009D16Rik|2510031P20Rik|AU018945|AW550977|C76045|CMT2A|CMT2B|Mad2lbp|mKIAA0110 MAD2L1 binding protein protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-31 chr8 128377373 128377732 + 0.771068449301683 NA intron (NM_001358959, intron 2 of 16) intron (NM_001358959, intron 2 of 16) 18311 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-6 chr18 60618019 60618306 + 0.771068449301683 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 6143 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-27 chr6 83055809 83056112 + 0.771068449301683 NA exon (NM_007517, exon 5 of 12) exon (NM_007517, exon 5 of 12) -1389 NM_019752 64704 Mm.21880 NM_019752 ENSMUSG00000068329 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-9 chr4 57846395 57846734 + 0.771068449301683 NA intron (NM_001035532, intron 1 of 3) intron (NM_001035532, intron 1 of 3) 1316 NM_001035532 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-12 chr7 58657883 58658178 + 0.771068449301683 NA promoter-TSS (NM_009728) promoter-TSS (NM_009728) -172 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-3 chr13 51971870 51972165 + 0.771068449301683 NA Intergenic Intergenic -124724 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-16 chr18 66146835 66147244 + 0.771068449301683 NA intron (NM_178793, intron 2 of 10) intron (NM_178793, intron 2 of 10) 72294 NR_030467 751558 NR_030467 ENSMUSG00000076147 Mir694 Mirn694|mir-694|mmu-mir-694 microRNA 694 ncRNA unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-2 chr10 75676507 75676759 + 0.771068449301683 NA intron (NM_172549, intron 29 of 36) intron (NM_172549, intron 29 of 36) -32625 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-9 chr14 20610526 20610787 + 0.771068449301683 NA intron (NM_030180, intron 1 of 20) intron (NM_030180, intron 1 of 20) 7698 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-18 chr2 77280719 77280983 + 0.771068449301683 NA promoter-TSS (NM_175465) promoter-TSS (NM_175465) -259 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-4 chr11 117318809 117319111 + 0.771068449301683 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -12755 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-23 chr5 92831894 92832187 + 0.771068449301683 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 22658 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-14 chr17 62676228 62676457 + 0.771068449301683 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 204975 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-28 chr7 79269638 79269892 + 0.771068449301683 NA Intergenic Intergenic -3501 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-25 chr5 143732664 143732868 + 0.771068449301683 NA promoter-TSS (NM_029749) promoter-TSS (NM_029749) -486 NM_029749 76800 Mm.259620 NM_029749 ENSMUSG00000051306 Usp42 2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e ubiquitin specific peptidase 42 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-2 chr11 100806831 100807163 + 0.771068449301683 NA intron (NM_001113563, intron 2 of 18) intron (NM_001113563, intron 2 of 18) 15573 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-6 chr12 73517523 73517822 + 0.771068449301683 NA Intergenic Intergenic 28723 NM_178715 238257 Mm.251196 NM_178715 ENSMUSG00000034435 Tmem30b 9130011B11Rik transmembrane protein 30B protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-32 chr9 14604732 14605104 + 0.771068449301683 NA intron (NM_001081395, intron 1 of 12) intron (NM_001081395, intron 1 of 12) 10082 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-20 chr3 143381175 143381391 + 0.771068449301683 NA Intergenic Intergenic 138228 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-7 chr19 41345418 41345702 + 0.771068449301683 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 39510 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_9_15_-0.943248077455082_3.52837596127246_0.771068449301683 chr12 81781910 81782179 + 0.771068449301683 NA promoter-TSS (NM_177395) promoter-TSS (NM_177395) -874 NM_001174107 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak1_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-2 chr16 31608719 31608910 + 0.771068449301683 NA Intergenic LTR48|LTR|ERV1 -9319 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-5 chr11 118340310 118340604 + 0.771068449301683 NA intron (NM_021440, intron 2 of 2) intron (NM_021440, intron 2 of 2) 2077 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-26 chr6 6434574 6434836 + 0.771068449301683 NA Intergenic Intergenic 143953 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Sem1 DSS1|Shfdg1|Shfg|Shfm1 SEM1, 26S proteasome complex subunit protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-13 chr17 5798124 5798357 + 0.771068449301683 NA promoter-TSS (NR_045081) promoter-TSS (NR_045081) -417 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-13 chr9 62120924 62121292 + 0.771068449301683 NA Intergenic Intergenic 1486 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-3 chr11 68091889 68092094 + 0.771068449301683 NA intron (NM_018768, intron 6 of 7) intron (NM_018768, intron 6 of 7) 125533 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-21 chr4 57842329 57842657 + 0.771068449301683 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -2755 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683 chr1 89475163 89475434 + 0.771068449301683 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 20487 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-22 chr4 62361685 62361971 + 0.771068449301683 NA intron (NM_175090, intron 1 of 4) intron (NM_175090, intron 1 of 4) 1127 NM_175090 20529 Mm.248637 NM_175090 ENSMUSG00000066150 Slc31a1 4930445G01Rik|AI787263|AU016967|Ctr1 solute carrier family 31, member 1 protein-coding common_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-4 chr16 20426112 20426338 + 0.771068449301683 NA intron (NM_176839, intron 1 of 6) CpG 169 NM_013790 27416 Mm.20845 NM_013790 ENSMUSG00000022822 Abcc5 2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein-coding common_peak1_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-3 chr18 67310295 67310547 + 0.771068449301683 NA intron (NM_053261, intron 4 of 7) intron (NM_053261, intron 4 of 7) 21198 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-30 chr8 33600565 33600913 + 0.771068449301683 NA intron (NM_017374, intron 1 of 6) intron (NM_017374, intron 1 of 6) 1118 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-8 chr14 7869988 7870252 + 0.771068449301683 NA intron (NM_001081427, intron 3 of 45) intron (NM_001081427, intron 3 of 45) 52163 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-19 chr2 90566787 90567101 + 0.771068449301683 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 13703 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_9_15_-0.943248077455082_3.52837596127246_0.771068449301683-12 chr16 16217256 16217532 + 0.771068449301683 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 4049 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-4 chr4 136333050 136333299 + 0.771068449301682 NA intron (NM_001355182, intron 8 of 10) intron (NM_001355182, intron 8 of 10) 21576 NM_001355182 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682 chr1 62714585 62714976 + 0.771068449301682 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 11463 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-50 chr6 53287401 53287666 + 0.771068449301682 NA intron (NM_001327821, intron 1 of 10) CpG 230 NM_001327821 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-38 chr3 53150664 53150908 + 0.771068449301682 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 109239 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-29 chr2 25193690 25193966 + 0.771068449301682 NA 3' UTR (NM_146115, exon 2 of 2) 3' UTR (NM_146115, exon 2 of 2) 2985 NM_146115 227612 Mm.119747 NM_146115 ENSMUSG00000059555 Tor4a A830007P12Rik torsin family 4, member A protein-coding unique_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-2 chr9 119062494 119062738 + 0.771068449301682 NA exon (NM_001164567, exon 9 of 20) exon (NM_001164567, exon 9 of 20) 9838 NM_001164567 22351 Mm.83817 NM_011700 ENSMUSG00000038775 Vill Villp villin-like protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-14 chr15 99862535 99862992 + 0.771068449301682 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 12693 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-5 chr7 68063029 68063229 + 0.771068449301682 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 110872 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-40 chr3 153944841 153945081 + 0.771068449301682 NA promoter-TSS (NM_007382) promoter-TSS (NM_007382) -318 NM_007382 11364 Mm.10530 NM_007382 ENSMUSG00000062908 Acadm AU018656|MCAD acyl-Coenzyme A dehydrogenase, medium chain protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-3 chr3 4689824 4690022 + 0.771068449301682 NA Intergenic Intergenic -108785 NR_045272 100503859 Mm.75172 NR_045272 ENSMUSG00000098659 1110015O18Rik - RIKEN cDNA 1110015O18 gene ncRNA unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-24 chr18 53248616 53248919 + 0.771068449301682 NA intron (NM_029394, intron 1 of 6) intron (NM_029394, intron 1 of 6) 3105 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-17 chr16 29730441 29730805 + 0.771068449301682 NA Intergenic Intergenic 151289 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-2 chr2 26146409 26146660 + 0.771068449301682 NA Intergenic Intergenic -6028 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-21 chr17 24721459 24721795 + 0.771068449301682 NA TTS (NR_002897) TTS (NR_002897) 838 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-9 chr13 40733494 40733815 + 0.771068449301682 NA non-coding (NR_125899, exon 2 of 3) non-coding (NR_125899, exon 2 of 3) 169 NM_011547 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682 chr1 180289663 180289905 + 0.771068449301682 NA Intergenic Intergenic -33484 NM_001128605 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-13 chr15 38696227 38696559 + 0.771068449301682 NA Intergenic Intergenic 32123 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-46 chr5 129778764 129779068 + 0.771068449301682 NA intron (NM_133900, intron 3 of 7) intron (NM_133900, intron 3 of 7) 8337 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-39 chr3 84953698 84954039 + 0.771068449301682 NA intron (NM_080428, intron 1 of 10) intron (NM_080428, intron 1 of 10) 1657 NM_080428 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-3 chr5 113208007 113208215 + 0.771068449301682 NA Intergenic Intergenic -18798 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-32 chr2 60873449 60873851 + 0.771068449301682 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 7788 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-7 chr11 59459380 59459587 + 0.771068449301682 NA TTS (NR_037992) TTS (NR_037992) 9438 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-34 chr2 131395918 131396146 + 0.771068449301682 NA Intergenic Intergenic -43140 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-5 chr4 149166824 149167058 + 0.771068449301682 NA promoter-TSS (NM_001356332) promoter-TSS (NM_001356332) -236 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding unique_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682 chr11 86347044 86347291 + 0.771068449301682 NA intron (NM_001080931, intron 2 of 29) B1F|SINE|Alu 10358 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-52 chr8 91464354 91464576 + 0.771068449301682 NA intron (NM_011936, intron 4 of 8) intron (NM_011936, intron 4 of 8) 150940 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-3 chr1 133777616 133777955 + 0.771068449301682 NA Intergenic Intergenic -24038 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-11 chr13 56021402 56021713 + 0.771068449301682 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 113993 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-19 chr17 13480194 13480422 + 0.771068449301682 NA Intergenic Intergenic -41148 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-4 chr1 189215396 189215667 + 0.771068449301682 NA intron (NM_001357119, intron 5 of 5) intron (NM_001357119, intron 5 of 5) 127822 NM_001159850 16526 Mm.33304 NM_010607 ENSMUSG00000037624 Kcnk2 A430027H14Rik|AI848635|TREK-1 potassium channel, subfamily K, member 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-41 chr4 137535071 137535389 + 0.771068449301682 NA intron (NM_008305, intron 40 of 96) intron (NM_008305, intron 40 of 96) -3056 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-25 chr18 63901873 63902159 + 0.771068449301682 NA intron (NM_001014981, intron 21 of 27) intron (NM_001014981, intron 21 of 27) 193321 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-6 chr10 108380121 108380405 + 0.771068449301682 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 48074 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-10 chr13 54632906 54633237 + 0.771068449301682 NA intron (NM_178397, intron 1 of 10) intron (NM_178397, intron 1 of 10) 11287 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-18 chr16 56655828 56656263 + 0.771068449301682 NA intron (NM_001014399, intron 15 of 27) intron (NM_001014399, intron 15 of 27) 61405 NM_001357124 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-2 chr1 90778940 90779315 + 0.771068449301682 NA exon (NM_001243008, exon 38 of 44) exon (NM_001243008, exon 38 of 44) 64844 NM_001243008 12835 Mm.7562 NM_009935 ENSMUSG00000048126 Col6a3 AI507288|Col6a-3 collagen, type VI, alpha 3 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-53 chr9 88262557 88262873 + 0.771068449301682 NA Intergenic Intergenic -64894 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-44 chr5 92371452 92371718 + 0.771068449301682 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -8289 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-10 chr9 120023838 120024093 + 0.771068449301682 NA promoter-TSS (NM_011724) promoter-TSS (NM_011724) -367 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-7 chr5 113208008 113208214 + 0.771068449301682 NA Intergenic Intergenic -18798 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-8 chr11 78398077 78398326 + 0.771068449301682 NA intron (NM_022411, intron 11 of 11) intron (NM_022411, intron 11 of 11) 3716 NR_003282 790911 Mm.457257 NR_003282 ENSMUSG00000085747 Slc13a2os Gm11194 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand ncRNA common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-6 chr5 53042363 53042557 + 0.771068449301682 NA Intergenic Intergenic -6893 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-49 chr6 47953783 47954023 + 0.771068449301682 NA non-coding (NR_027963, exon 6 of 6) non-coding (NR_027963, exon 6 of 6) 513 NM_178898 101197 Mm.241063 NM_178898 ENSMUSG00000045466 Zfp956 AI894139 zinc finger protein 956 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-22 chr17 32389214 32389406 + 0.771068449301682 NA promoter-TSS (NM_011717) promoter-TSS (NM_011717) 129 NR_033525 22404 Mm.274948 NM_011717 ENSMUSG00000024050 Wiz - widely-interspaced zinc finger motifs protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-51 chr8 46842559 46842758 + 0.771068449301682 NA intron (NR_152560, intron 6 of 7) intron (NR_152560, intron 6 of 7) 102913 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-35 chr2 131720842 131721283 + 0.771068449301682 NA Intergenic ORR1D1|LTR|ERVL-MaLR 126594 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-16 chr16 23401843 23402205 + 0.771068449301682 NA Intergenic Intergenic -27109 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-3 chrX 99531707 99531967 + 0.771068449301682 NA Intergenic Intergenic -61102 NM_008853 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-43 chr5 76183484 76183682 + 0.771068449301682 NA promoter-TSS (NM_011626) promoter-TSS (NM_011626) -297 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-30 chr2 30864530 30864733 + 0.771068449301682 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 19264 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-31 chr2 35232572 35232950 + 0.771068449301682 NA Intergenic Intergenic -23598 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-28 chr2 18677110 18677422 + 0.771068449301682 NA 5' UTR (NM_007552, exon 1 of 10) 5' UTR (NM_007552, exon 1 of 10) 248 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-48 chr6 37356385 37356629 + 0.771068449301682 NA intron (NM_178661, intron 5 of 11) intron (NM_178661, intron 5 of 11) -56531 NM_001347104 320127 Mm.119469 NM_001081206 ENSMUSG00000038665 Dgki 6430604M11Rik|C130010K08Rik diacylglycerol kinase, iota protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-33 chr2 113368861 113369325 + 0.771068449301682 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 41357 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-6 chr9 70259221 70259497 + 0.771068449301682 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 52009 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-2 chr10 75551085 75551349 + 0.771068449301682 NA 3' UTR (NM_198860, exon 4 of 4) 3' UTR (NM_198860, exon 4 of 4) 9113 NM_198860 192734 Mm.259320 NM_198860 ENSMUSG00000046807 Lrrc75b AI646023|Fam211b leucine rich repeat containing 75B protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-23 chr17 36932218 36932488 + 0.771068449301682 NA intron (NR_045439, intron 2 of 2) intron (NR_045439, intron 2 of 2) 8561 NR_045439 73286 Mm.426884 NR_045439 ENSMUSG00000092239 1700031A10Rik - RIKEN cDNA 1700031A10 gene ncRNA unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-36 chr2 168078379 168078622 + 0.771068449301682 NA Intergenic Intergenic -2504 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-12 chr14 72710159 72710476 + 0.771068449301682 NA promoter-TSS (NM_207636) promoter-TSS (NM_207636) -314 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-27 chr19 16274085 16274315 + 0.771068449301682 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 40804 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-9 chr7 97081294 97081544 + 0.771068449301682 NA promoter-TSS (NM_010248) promoter-TSS (NM_010248) -332 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-42 chr4 138214197 138214448 + 0.771068449301682 NA Intergenic Intergenic -2290 NM_001122896 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-5 chr10 78717123 78717382 + 0.771068449301682 NA intron (NM_009809, intron 1 of 6) intron (NM_009809, intron 1 of 6) 1041 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-26 chr19 9047705 9048100 + 0.771068449301682 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 40054 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-15 chr16 17646820 17647050 + 0.771068449301682 NA intron (NM_001166164, intron 1 of 7) intron (NM_001166164, intron 1 of 7) 465 NM_001166164 72315 Mm.297777 NM_001166164 ENSMUSG00000041617 Ccdc74a 2310015A05Rik coiled-coil domain containing 74A protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-47 chr5 151155831 151156141 + 0.771068449301682 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 34207 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682 chr1 93477591 93477791 + 0.771068449301682 NA intron (NM_133808, intron 1 of 27) intron (NM_133808, intron 1 of 27) 686 NM_001357556 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-20 chr17 13682388 13682578 + 0.771068449301682 NA Intergenic Intergenic -78058 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-45 chr5 115494507 115494779 + 0.771068449301682 NA Intergenic Intergenic -10159 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-8 chr7 13040637 13040853 + 0.771068449301682 NA Intergenic Intergenic -2470 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding unique_peak1_17_8_0.728841226803637_3.53434561484413_0.771068449301682-37 chr2 168192438 168192751 + 0.771068449301682 NA intron (NR_132310, intron 9 of 11) intron (NR_132310, intron 9 of 11) 14518 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding common_peak2_17_8_0.728841226803637_3.53434561484413_0.771068449301682-4 chr6 50254589 50254891 + 0.771068449301682 NA intron (NM_018769, intron 1 of 9) intron (NM_018769, intron 1 of 9) 7029 NM_018769 54722 Mm.248361 NM_018769 ENSMUSG00000029821 Gsdme 2310037D07Rik|4932441K13Rik|Dfna5|Dfna5h|EG14210|Fin15 gasdermin E protein-coding common_peak2_150_101_0.273172562285544_6.80901162311427_0.770980376636119 chr15 83140602 83142077 + 0.770980376636119 NA intron (NM_001347082, intron 1 of 7) intron (NM_001347082, intron 1 of 7) 8039 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak1_122_123_-0.302401140558982_6.80299574010738_0.770980376636094 chr13 9093945 9094784 + 0.770980376636094 NA intron (NM_172585, intron 1 of 17) (CGGGG)n|Simple_repeat|Simple_repeat 483 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak2_123_123_-0.290801750407337_6.80879543518321_0.770980376636094 chr9 116174517 116175710 + 0.770980376636094 NA 5' UTR (NM_009371, exon 1 of 8) 5' UTR (NM_009371, exon 1 of 8) 250 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-18 chr4 135310655 135310949 + 0.769930178837768 NA Intergenic Intergenic -38042 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768 chr1 167278804 167279094 + 0.769930178837768 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 6178 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-7 chr8 46793112 46793389 + 0.769930178837768 NA intron (NR_152560, intron 1 of 7) intron (NR_152560, intron 1 of 7) 53505 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-6 chr13 110396900 110397256 + 0.769930178837768 NA intron (NM_152804, intron 5 of 13) intron (NM_152804, intron 5 of 13) 2034 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768 chr1 36919773 36920145 + 0.769930178837768 NA intron (NM_018872, intron 1 of 40) intron (NM_018872, intron 1 of 40) 19568 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding unique_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768 chr9 32707239 32707463 + 0.769930178837768 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 11309 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-5 chr11 79992545 79992821 + 0.769930178837768 NA promoter-TSS (NM_001163018) promoter-TSS (NM_001163018) -423 NM_001163018 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 SUZ12 polycomb repressive complex 2 subunit protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-13 chr18 8897089 8897329 + 0.769930178837768 NA Intergenic Intergenic -315647 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-6 chr8 18724857 18725095 + 0.769930178837768 NA intron (NM_007426, intron 1 of 8) intron (NM_007426, intron 1 of 8) 16586 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-30 chr8 26980546 26980959 + 0.769930178837768 NA 3' UTR (NM_001101502, exon 2 of 2) 3' UTR (NM_001101502, exon 2 of 2) 3416 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-2 chr1 93835388 93835708 + 0.769930178837768 NA intron (NM_001310767, intron 6 of 9) intron (NM_001310767, intron 6 of 9) 10308 NM_001310767 98314 Mm.383401 NM_178882 ENSMUSG00000073609 D2hgdh AA408776|AA408778|AI325464 D-2-hydroxyglutarate dehydrogenase protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-9 chr12 110203712 110204060 + 0.769930178837768 NA Intergenic Intergenic -45813 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-11 chr16 23499124 23499443 + 0.769930178837768 NA intron (NM_001359083, intron 2 of 10) intron (NM_001359083, intron 2 of 10) 21532 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-19 chr4 45472912 45473144 + 0.769930178837768 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 57800 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-7 chr14 28961604 28962011 + 0.769930178837768 NA intron (NM_009785, intron 31 of 37) intron (NM_009785, intron 31 of 37) -56401 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-28 chr7 84749376 84749715 + 0.769930178837768 NA intron (NR_038175, intron 2 of 4) intron (NR_038175, intron 2 of 4) -59588 NM_001360582 65098 Mm.209349 NM_022985 ENSMUSG00000030629 Zfand6 3110005P07Rik|Awp1|Za20d3 zinc finger, AN1-type domain 6 protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-5 chr18 74063902 74064147 + 0.769930178837768 NA intron (NM_172632, intron 1 of 5) CpG 925 NM_172632 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-22 chr5 102783077 102783572 + 0.769930178837768 NA intron (NM_001286468, intron 1 of 7) intron (NM_001286468, intron 1 of 7) 14514 NM_001286468 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768 chr11 59226557 59226970 + 0.769930178837768 NA intron (NM_007476, intron 1 of 4) intron (NM_007476, intron 1 of 4) 1399 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-17 chr2 30847326 30847541 + 0.769930178837768 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 2066 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-14 chr19 3376434 3376784 + 0.769930178837768 NA intron (NM_013495, intron 14 of 18) intron (NM_013495, intron 14 of 18) -12248 NM_001039658 17771 Mm.209941 NM_010841 ENSMUSG00000024905 Tesmin Mtl5 testis expressed metallothionein like protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-5 chr7 113146593 113146879 + 0.769930178837768 NA Intergenic Intergenic -4721 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-8 chr2 29620851 29621135 + 0.769930178837768 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 1273 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-12 chr14 69332414 69332626 + 0.769930178837768 NA intron (NR_045091, intron 2 of 2) intron (NR_045091, intron 2 of 2) 4617 NR_045091 100504477 Mm.396396 NR_045091 ENSMUSG00000097511 Gm16677 - predicted gene, 16677 ncRNA unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-10 chr13 32660802 32661006 + 0.769930178837768 NA Intergenic Intergenic 120875 NM_001166030 238564 Mm.60041 NM_001166030 ENSMUSG00000044951 Mylk4 EG238564 myosin light chain kinase family, member 4 protein-coding common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768-7 chr9 53771790 53772046 + 0.769930178837768 NA intron (NM_028060, intron 1 of 7) CpG 383 NM_028060 72022 Mm.26159 NM_028060 ENSMUSG00000042195 Slc35f2 1500009K05Rik|AU019213 solute carrier family 35, member F2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-27 chr7 79935382 79935736 + 0.769930178837768 NA promoter-TSS (NM_027420) promoter-TSS (NM_027420) -295 NM_027420 70420 Mm.34266 NM_027420 ENSMUSG00000039043 Arpin 2610034B18Rik actin-related protein 2/3 complex inhibitor protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-16 chr2 151968717 151969290 + 0.769930178837768 NA TTS (NM_001289151) TTS (NM_001289151) -1386 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768-4 chr15 77916192 77916433 + 0.769930178837768 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 12682 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-8 chr8 61625507 61625727 + 0.769930178837768 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -34448 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-10 chrX 152731881 152732102 + 0.769930178837768 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 37495 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-3 chr1 120758108 120758481 + 0.769930178837768 NA Intergenic Intergenic 155807 NM_010133 13798 Mm.2657 NM_010133 ENSMUSG00000058665 En1 En-1|Mo-en.1|engrailed-1 engrailed 1 protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-2 chr11 7130156 7130550 + 0.769930178837768 NA exon (NM_009622, exon 5 of 20) exon (NM_009622, exon 5 of 20) 58216 NR_045101 100041347 Mm.300962 NR_045101 ENSMUSG00000087512 Gm11985 - predicted gene 11985 ncRNA common_peak1_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-4 chr7 110933993 110934220 + 0.769930178837768 NA intron (NM_194464, intron 2 of 20) intron (NM_194464, intron 2 of 20) 12081 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-6 chr11 97451836 97452317 + 0.769930178837768 NA exon (NM_021493, exon 2 of 19) exon (NM_021493, exon 2 of 19) 1916 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-17 chr3 108858162 108858820 + 0.769930178837768 NA intron (NM_001165965, intron 10 of 11) MER5B|DNA|hAT-Charlie -17989 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768 chr11 3290699 3290928 + 0.769930178837768 NA exon (NM_001253691, exon 1 of 5) exon (NM_001253691, exon 1 of 5) 356 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-9 chr15 83452101 83452380 + 0.769930178837768 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) -4360 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-2 chr12 83596733 83596982 + 0.769930178837768 NA intron (NM_001359167, intron 1 of 12) CpG 365 NM_001359167 217695 Mm.59257 NM_183154 ENSMUSG00000042628 Zfyve1 DFCP1|G630053K23|TAFF1|ZNFN2A1|mKIAA1589 zinc finger, FYVE domain containing 1 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-15 chr19 32302295 32302586 + 0.769930178837768 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 46876 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-7 chr12 32061387 32061786 + 0.769930178837768 NA promoter-TSS (NM_011158) promoter-TSS (NM_011158) -307 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-14 chr17 17294513 17294893 + 0.769930178837768 NA intron (NM_001324550, intron 1 of 3) intron (NM_001324550, intron 1 of 3) 260 NM_001324550 100862203 Mm.484235 NM_001324550 Gm6712 EG626854 predicted gene 6712 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-5 chr12 110737504 110737756 + 0.769930178837768 NA promoter-TSS (NM_027149) promoter-TSS (NM_027149) -267 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak1_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-2 chr15 97989831 97990065 + 0.769930178837768 NA intron (NM_001113515, intron 17 of 52) intron (NM_001113515, intron 17 of 52) 14776 NM_031163 12824 Mm.2423 NM_031163 ENSMUSG00000022483 Col2a1 Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|Rgsc856 collagen, type II, alpha 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-24 chr7 82810735 82811023 + 0.769930178837768 NA Intergenic Intergenic -55235 NR_046004 77800 Mm.444811 NR_046004 ENSMUSG00000086690 4933406J10Rik A930009F24Rik RIKEN cDNA 4933406J10 gene ncRNA unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-20 chr5 31580260 31580734 + 0.769930178837768 NA Intergenic Intergenic -9100 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-15 chr18 46741188 46741397 + 0.769930178837768 NA promoter-TSS (NM_001303015) promoter-TSS (NM_001303015) 287 NM_026217 67526 Mm.9852 NM_026217 ENSMUSG00000032905 Atg12 4931423H11Rik|A330058M13Rik|Apg12l|Atg12l autophagy related 12 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-22 chr5 148949796 148950018 + 0.769930178837768 NA promoter-TSS (NR_040686) promoter-TSS (NR_040686) -343 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-32 chr8 108717635 108717884 + 0.769930178837768 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 3115 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-4 chr10 79767891 79768275 + 0.769930178837768 NA intron (NR_038088, intron 3 of 4) intron (NR_038088, intron 3 of 4) -1131 NR_027505 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768-2 chr11 97429089 97429474 + 0.769930178837768 NA Intergenic Intergenic -20879 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768-6 chr4 152362797 152362996 + 0.769930178837768 NA exon (NM_029216, exon 10 of 41) exon (NM_029216, exon 10 of 41) 24245 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-23 chr5 136662548 136663021 + 0.769930178837768 NA Intergenic Intergenic -30362 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-27 chr8 87504227 87504532 + 0.769930178837768 NA intron (NR_125722, intron 1 of 3) intron (NR_125722, intron 1 of 3) 31263 NR_125722 100040294 Mm.213632 NR_033430 ENSMUSG00000097248 Gm2694 C230036H16Rik|linc1582 predicted gene 2694 ncRNA unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-8 chr12 75529145 75529405 + 0.769930178837768 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 66925 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-25 chr6 87868476 87868880 + 0.769930178837768 NA Intergenic Intergenic -17572 NM_001355195 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-4 chr12 82154294 82154549 + 0.769930178837768 NA Intergenic Intergenic -15595 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-23 chr7 19750360 19750804 + 0.769930178837768 NA Intergenic Intergenic -1009 NM_001159724 19294 Mm.4341 NM_008990 ENSMUSG00000062300 Nectin2 AI325026|AI987993|Cd112|MPH|Pvr|Pvrl2|Pvs|nectin-2 nectin cell adhesion molecule 2 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-11 chr13 59889809 59890237 + 0.769930178837768 NA Intergenic Intergenic -66876 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-21 chr5 5559733 5560166 + 0.769930178837768 NA promoter-TSS (NM_001357031) promoter-TSS (NM_001357031) -408 NM_001357031 207704 Mm.323984 NM_153116 ENSMUSG00000040464 Gtpbp10 4930545J22Rik|BC034507 GTP-binding protein 10 (putative) protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-7 chr2 27740640 27740949 + 0.769930178837768 NA intron (NM_001290481, intron 2 of 9) intron (NM_001290481, intron 2 of 9) 30211 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-9 chr3 28735465 28735788 + 0.769930178837768 NA Intergenic Intergenic 37723 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-10 chr16 13381607 13381876 + 0.769930178837768 NA intron (NM_153588, intron 4 of 14) intron (NM_153588, intron 4 of 14) 23320 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-9 chr8 82630035 82630281 + 0.769930178837768 NA Intergenic Intergenic 143968 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-10 chr6 47559864 47560153 + 0.769930178837768 NA intron (NM_001146689, intron 3 of 19) intron (NM_001146689, intron 3 of 19) 35022 NM_001146689 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-16 chr19 42258462 42258682 + 0.769930178837768 NA intron (NM_027694, intron 1 of 4) intron (NM_027694, intron 1 of 4) 2833 NM_027694 71146 Mm.329851 NM_027694 ENSMUSG00000042532 Golga7b 4933417O08Rik|AI839934 golgi autoantigen, golgin subfamily a, 7B protein-coding common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768-3 chr11 115419658 115419971 + 0.769930178837768 NA promoter-TSS (NM_183285) promoter-TSS (NM_183285) 105 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-26 chr8 36436118 36436458 + 0.769930178837768 NA Intergenic Intergenic -52903 NM_176952 319582 Mm.180924 NM_176952 ENSMUSG00000039620 6430573F11Rik Kiaa1456|TRM9L|Trmt9b RIKEN cDNA 6430573F11 gene protein-coding common_peak1_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-3 chr4 89294084 89294287 + 0.769930178837768 NA promoter-TSS (NR_132431) promoter-TSS (NR_132431) 434 NM_009877 12578 Mm.4733 NM_009877 ENSMUSG00000044303 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19|p19ARF cyclin dependent kinase inhibitor 2A protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-2 chr10 12884521 12884913 + 0.769930178837768 NA Intergenic Intergenic -22982 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_12_19_-0.889334940859005_3.87726062445786_0.769930178837768 chr12 82154263 82154541 + 0.769930178837768 NA Intergenic Intergenic -15614 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-4 chr3 102735184 102735486 + 0.769930178837768 NA promoter-TSS (NR_040588) promoter-TSS (NR_040588) 82 NR_040588 78491 Mm.243766 NR_040588 ENSMUSG00000086745 Tspan2os 2410057H14Rik tetraspanin 2, opposite strand ncRNA unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-12 chr16 57532497 57533012 + 0.769930178837768 NA intron (NM_001040397, intron 4 of 4) intron (NM_001040397, intron 4 of 4) -16488 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768 chr1 167282473 167282888 + 0.769930178837768 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 2447 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-20 chr4 45966157 45966525 + 0.769930178837768 NA intron (NM_001290475, intron 1 of 16) intron (NM_001290475, intron 1 of 16) 1006 NM_001290475 100121 Mm.275413 NM_146142 ENSMUSG00000035517 Tdrd7 5730495N10Rik|AI447470|PCTAIRE2BP tudor domain containing 7 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-13 chr16 57251618 57252023 + 0.769930178837768 NA Intergenic Intergenic -20354 NM_001358433 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-6 chr18 75341583 75341885 + 0.769930178837768 NA Intergenic Intergenic 25354 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-21 chr5 74793207 74793775 + 0.769930178837768 NA Intergenic MIRb|SINE|MIR -90588 NM_001159577 16924 Mm.440403 NM_010727 ENSMUSG00000029228 Lnx1 Lnx ligand of numb-protein X 1 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-8 chr15 38928528 38928742 + 0.769930178837768 NA Intergenic Intergenic -5274 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-3 chr10 17653513 17654138 + 0.769930178837768 NA Intergenic Intergenic -69403 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-25 chr7 139259381 139259670 + 0.769930178837768 NA intron (NM_001098636, intron 2 of 2) intron (NM_001098636, intron 2 of 2) 11043 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-11 chr8 27087614 27087919 + 0.769930178837768 NA intron (NM_054044, intron 1 of 18) intron (NM_054044, intron 1 of 18) 1925 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-18 chr4 6367009 6367313 + 0.769930178837768 NA intron (NM_001098227, intron 1 of 8) intron (NM_001098227, intron 1 of 8) 1481 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-3 chr14 25536180 25536609 + 0.769930178837768 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) 1955 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-31 chr8 86535862 86536194 + 0.769930178837768 NA intron (NM_172912, intron 13 of 28) intron (NM_172912, intron 13 of 28) 30562 NM_172912 244562 Mm.67485 NM_172912 ENSMUSG00000036872 Abcc12 4930467B22Rik|MRP9 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein-coding common_peak2_22_11_0.664945780648343_3.91743539104533_0.769930178837768-5 chr3 20057277 20057574 + 0.769930178837768 NA promoter-TSS (NM_009210) promoter-TSS (NM_009210) -386 NM_009210 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-24 chr6 55181462 55181787 + 0.769930178837768 NA Intergenic Intergenic -6634 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-26 chr6 91378951 91379392 + 0.769930178837768 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 32198 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-3 chr12 79191438 79191699 + 0.769930178837768 NA promoter-TSS (NM_001362269) promoter-TSS (NM_001362269) 287 NM_001362270 17252 Mm.291799 NM_021557 ENSMUSG00000066441 Rdh11 2610319N22Rik|AI428145|AU045252|Arsdr1|C85936|CGI-82|HCBP12|M42C60|Mdt1|Psdr1|SCALD|UBE-1c1|Ube-1c|ralR1 retinol dehydrogenase 11 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-19 chr5 25499774 25500002 + 0.769930178837768 NA promoter-TSS (NR_030700) promoter-TSS (NR_030700) 91 NR_030700 320965 Mm.32025 NR_030700 4831440E17Rik - RIKEN cDNA 4831440E17 gene ncRNA common_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-12 chr8 126667131 126667422 + 0.769930178837768 NA Intergenic Intergenic -73840 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_22_11_0.664945780648343_3.91743539104533_0.769930178837768-29 chr7 90309017 90309410 + 0.769930178837768 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 6858 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak2_12_19_-0.889334940859005_3.87726062445786_0.769930178837768-4 chr11 43853387 43853724 + 0.769930178837768 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) -17066 NM_007416 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak1_289_269_-0.196355636066174_7.97863777901774_0.76962787764328 chr15 102016358 102018660 + 0.76962787764328 NA Intergenic MIRb|SINE|MIR -10707 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak1_208_144_0.231334743336233_7.29557646168305_0.769054635187193 chr19 53037036 53038542 + 0.769054635187193 NA intron (NM_133216, intron 1 of 20) intron (NM_133216, intron 1 of 20) 865 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding common_peak2_112_113_-0.30256731250449_6.6816063579125_0.768981819768006 chr19 40463309 40464192 + 0.768981819768006 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -12352 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_137_92_0.277475113342434_6.67789636777925_0.768981819767981 chr16 55636461 55637692 + 0.768981819767981 NA Intergenic Intergenic 142345 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_238_224_-0.210394874666743_7.70858375388367_0.768974114559665 chr8 36820046 36822251 + 0.768974114559665 NA intron (NM_001194940, intron 4 of 17) B2_Mm2|SINE|B2 -88094 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_101_103_-0.31682823815043_6.54202559906588_0.768917376478937 chr4 135312771 135313943 + 0.768917376478937 NA Intergenic Intergenic 39857 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_100_103_-0.330941818883678_6.53496880869925_0.768917376478937 chr17 72918513 72919965 + 0.768917376478937 NA intron (NM_029999, intron 1 of 2) intron (NM_029999, intron 1 of 2) 934 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_100_103_-0.330941818883678_6.53496880869925_0.768917376478937-2 chr9 57427374 57428079 + 0.768917376478937 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 12010 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_101_103_-0.31682823815043_6.54202559906588_0.768917376478937-2 chr6 125313199 125314401 + 0.768917376478937 NA promoter-TSS (NM_010736) promoter-TSS (NM_010736) 85 NM_010736 17000 Mm.3122 NM_010736 ENSMUSG00000030339 Ltbr AI256028|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3 lymphotoxin B receptor protein-coding common_peak1_125_83_0.29399789589483_6.53931637072618_0.768917376478913-3 chr8 11326910 11328208 + 0.768917376478913 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -14733 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_125_83_0.29399789589483_6.53931637072618_0.768917376478913-2 chr3 41081891 41083022 + 0.768917376478913 NA intron (NM_027558, intron 1 of 2) CpG 590 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_125_83_0.29399789589483_6.53931637072618_0.768917376478913 chr2 4557965 4559728 + 0.768917376478913 NA promoter-TSS (NM_001177844) promoter-TSS (NM_001177844) -908 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_257_181_0.205173533091702_7.61038140674455_0.768520103942075 chr6 17306164 17308941 + 0.768520103942075 NA promoter-TSS (NM_001243064) promoter-TSS (NM_001243064) -88 NM_001243064 12389 Mm.28278 NM_007616 ENSMUSG00000007655 Cav1 Cav|Cav-1 caveolin 1, caveolae protein protein-coding common_peak1_162_158_-0.257739965559932_7.18401297250439_0.767986926404586 chr17 84073452 84074855 + 0.767986926404586 NA Intergenic Intergenic -4507 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_72_45_0.380853479508914_5.71398869581147_0.767941280947589-2 chr14 20346397 20347172 + 0.767941280947589 NA exon (NM_027475, exon 2 of 14) exon (NM_027475, exon 2 of 14) 1337 NM_027475 70601 Mm.35105 NM_027475 ENSMUSG00000021810 Ecd 5730461K03Rik|Hsgt1 ecdysoneless cell cycle regulator protein-coding common_peak1_72_45_0.380853479508914_5.71398869581147_0.767941280947589 chr10 7118015 7119167 + 0.767941280947589 NA TTS (NM_172546) TTS (NM_172546) 93646 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_72_45_0.380853479508914_5.71398869581147_0.767941280947589 chr15 62321379 62322145 + 0.767941280947589 NA Intergenic Intergenic -102311 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_54_60_-0.431905036211948_5.71478481945691_0.767941280947577 chr14 30479624 30480308 + 0.767941280947577 NA intron (NM_133761, intron 1 of 9) CpG 401 NM_133761 75901 Mm.28733 NM_133761 ENSMUSG00000021962 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping mRNA 1A protein-coding common_peak1_54_60_-0.431905036211948_5.71478481945691_0.767941280947577 chr2 38535519 38536385 + 0.767941280947577 NA intron (NM_001159631, intron 1 of 9) MIR3|SINE|MIR 24076 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_54_60_-0.431905036211948_5.71478481945691_0.767941280947577-3 chr7 109518370 109518923 + 0.767941280947577 NA promoter-TSS (NM_011975) promoter-TSS (NM_011975) -549 NM_011975 26451 Mm.305750 NM_011975 ENSMUSG00000046364 Rpl27a L27'|L27A|L29 ribosomal protein L27A protein-coding common_peak2_54_60_-0.431905036211948_5.71478481945691_0.767941280947577-2 chr6 38636277 38637273 + 0.767941280947577 NA exon (NM_001033171, exon 1 of 5) exon (NM_001033171, exon 1 of 5) 464 NM_001033171 74253 Mm.121859 NM_001033171 ENSMUSG00000071537 Klrg2 2310020F24Rik killer cell lectin-like receptor subfamily G, member 2 protein-coding unique_peak2_54_60_-0.431905036211948_5.71478481945691_0.767941280947577 chr9 61322820 61323750 + 0.767941280947577 NA Intergenic Intergenic -29476 NR_045334 622037 Mm.126243 NR_045334 ENSMUSG00000111658 B930092H01Rik - RIKEN cDNA B930092H01 gene ncRNA common_peak2_55_33_0.437181272968341_5.30605347773451_0.767679714496325-2 chr15 76203527 76204052 + 0.767679714496325 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 2532 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325 chr14 33338639 33339275 + 0.767679714496325 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 72067 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_55_33_0.437181272968341_5.30605347773451_0.767679714496325-6 chr8 122178058 122178680 + 0.767679714496325 NA Intergenic Intergenic -103772 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-3 chr2 3512269 3512678 + 0.767679714496325 NA promoter-TSS (NM_177647) promoter-TSS (NM_177647) 341 NR_103465 50497 Mm.89341 NM_015765 ENSMUSG00000051396 Hspa14 70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1 heat shock protein 14 protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-4 chr17 31981603 31982406 + 0.767679714496325 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 52504 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-8 chr9 97017872 97018571 + 0.767679714496325 NA 5' UTR (NM_145134, exon 1 of 3) 5' UTR (NM_145134, exon 1 of 3) 134 NM_145134 211949 Mm.491271 NM_145134 ENSMUSG00000046997 Spsb4 D030068E18Rik|SSB-4|Ssb4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-5 chr4 129334843 129335328 + 0.767679714496325 NA promoter-TSS (NM_025970) promoter-TSS (NM_025970) 285 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4, chromatin remodeling factor protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-4 chr15 84281109 84281728 + 0.767679714496325 NA intron (NM_133167, intron 3 of 12) intron (NM_133167, intron 3 of 12) -43302 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding common_peak2_55_33_0.437181272968341_5.30605347773451_0.767679714496325 chr11 116273565 116274096 + 0.767679714496325 NA intron (NM_146032, intron 1 of 15) CpG 387 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-5 chr16 37653620 37654205 + 0.767679714496325 NA intron (NM_026610, intron 1 of 2) intron (NM_026610, intron 1 of 2) 456 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding common_peak1_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-2 chr13 42346852 42347502 + 0.767679714496325 NA Intergenic Intergenic 45701 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-6 chr19 53313069 53313695 + 0.767679714496325 NA intron (NM_001360348, intron 1 of 5) CpG 1937 NM_001360348 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-3 chr15 93710932 93711635 + 0.767679714496325 NA Intergenic Intergenic -115392 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-7 chr5 150522383 150523126 + 0.767679714496325 NA 5' UTR (NM_009765, exon 1 of 27) 5' UTR (NM_009765, exon 1 of 27) 133 NM_001081001 12190 Mm.236256 NM_009765 ENSMUSG00000041147 Brca2 Fancd1|RAB163 breast cancer 2, early onset protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325 chr13 36529396 36530171 + 0.767679714496325 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 204694 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-7 chr2 166805627 166806265 + 0.767679714496325 NA intron (NM_001085495, intron 1 of 38) CpG 365 NM_001085495 99371 Mm.297192 NM_001085495 ENSMUSG00000074582 Arfgef2 AI463430|AW493672|BIG2|E230011G24Rik ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding common_peak2_55_33_0.437181272968341_5.30605347773451_0.767679714496325-5 chr8 111717617 111718318 + 0.767679714496325 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 14169 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-2 chr13 46929877 46930408 + 0.767679714496325 NA promoter-TSS (NM_010617) promoter-TSS (NM_010617) -424 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding common_peak1_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-4 chr4 132639202 132639731 + 0.767679714496325 NA intron (NM_010166, intron 1 of 17) intron (NM_010166, intron 1 of 17) 420 NM_010166 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-2 chr15 78492943 78493555 + 0.767679714496325 NA intron (NM_008368, intron 1 of 9) intron (NM_008368, intron 1 of 9) 1817 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak2_55_33_0.437181272968341_5.30605347773451_0.767679714496325-4 chr3 84443492 84443995 + 0.767679714496325 NA 3' UTR (NM_001205355, exon 12 of 12) 3' UTR (NM_001205355, exon 12 of 12) 35748 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-3 chr15 62501342 62502029 + 0.767679714496325 NA Intergenic Intergenic -282234 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_39_46_-0.511946888279208_5.29861540753803_0.767679714496325 chr10 80576807 80577269 + 0.767679714496325 NA exon (NM_078477, exon 1 of 2) exon (NM_078477, exon 1 of 2) 258 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak1_55_33_0.437181272968341_5.30605347773451_0.767679714496325-8 chr8 60755684 60756153 + 0.767679714496325 NA Intergenic Intergenic 100361 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_55_33_0.437181272968341_5.30605347773451_0.767679714496325-3 chr19 3707848 3708151 + 0.767679714496325 NA promoter-TSS (NM_001358258) promoter-TSS (NM_001358258) -294 NM_001358256 72056 Mm.23780 NM_028077 ENSMUSG00000035372 1810055G02Rik AI256204 RIKEN cDNA 1810055G02 gene protein-coding common_peak2_39_46_-0.511946888279208_5.29861540753803_0.767679714496325-6 chr5 115572883 115573223 + 0.767679714496325 NA intron (NM_172719, intron 2 of 57) intron (NM_172719, intron 2 of 57) 7790 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak2_71_76_-0.38213027159544_6.07572140489718_0.76712236370227-3 chr7 27227646 27228977 + 0.76712236370227 NA exon (NM_181593, exon 1 of 7) exon (NM_181593, exon 1 of 7) 286 NM_181593 233011 Mm.30963 NM_181593 ENSMUSG00000003752 Itpkc 9130023N17Rik inositol 1,4,5-trisphosphate 3-kinase C protein-coding common_peak2_71_76_-0.38213027159544_6.07572140489718_0.76712236370227-4 chr7 144685200 144686256 + 0.76712236370227 NA intron (NM_178642, intron 1 of 25) intron (NM_178642, intron 1 of 25) 52864 NM_178642 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding common_peak2_71_76_-0.38213027159544_6.07572140489718_0.76712236370227 chr11 74770357 74771337 + 0.76712236370227 NA promoter-TSS (NM_026197) promoter-TSS (NM_026197) -16 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak2_71_76_-0.38213027159544_6.07572140489718_0.76712236370227-2 chr13 19394967 19396384 + 0.76712236370227 NA intron (NM_001347485, intron 1 of 7) CpG 138 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_92_59_0.344394546171718_6.07908786869438_0.767122363702258 chr4 3776430 3777226 + 0.767122363702258 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 58827 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_92_59_0.344394546171718_6.07908786869438_0.767122363702258-2 chr5 110230554 110231571 + 0.767122363702258 NA promoter-TSS (NM_001253814) promoter-TSS (NM_001253814) 58 NM_027922 71782 Mm.288442 NM_027922 ENSMUSG00000029501 Ankle2 1110001J12Rik|AI661024|D5Ertd585e ankyrin repeat and LEM domain containing 2 protein-coding common_peak2_92_59_0.344394546171718_6.07908786869438_0.767122363702258-2 chr9 41474846 41475699 + 0.767122363702258 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 379 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_92_59_0.344394546171718_6.07908786869438_0.767122363702258 chr3 52088604 52089361 + 0.767122363702258 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 16024 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak1_151_102_0.26855296821544_6.82077701129094_0.766808248243826 chr8 122186749 122187439 + 0.766808248243826 NA Intergenic Intergenic -95047 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_124_124_-0.290883503329144_6.82034253299751_0.766808248243802 chr17 35051235 35052320 + 0.766808248243802 NA intron (NM_033444, intron 1 of 5) intron (NM_033444, intron 1 of 5) 1534 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak2_136_135_-0.281247267134559_6.94683920768306_0.766768755416038 chr5 113907315 113908658 + 0.766768755416038 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 720 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_90_94_-0.349713363874949_6.39499892639347_0.765859175915144 chr10 115315389 115316381 + 0.765859175915144 NA promoter-TSS (NM_024454) promoter-TSS (NM_024454) -294 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding common_peak2_91_94_-0.334057286107937_6.40282696527698_0.765859175915144 chr2 180224397 180225784 + 0.765859175915144 NA intron (NM_001081171, intron 1 of 78) CpG 769 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_91_94_-0.334057286107937_6.40282696527698_0.765859175915144-3 chr8 105605326 105606055 + 0.765859175915144 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 461 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak1_114_75_0.307527707533303_6.40169136721024_0.765859175915144 chr8 121989975 121990921 + 0.765859175915144 NA intron (NM_016812, intron 5 of 13) intron (NM_016812, intron 5 of 13) 12424 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak2_91_94_-0.334057286107937_6.40282696527698_0.765859175915144-2 chr4 32656627 32657660 + 0.765859175915144 NA promoter-TSS (NM_001081392) promoter-TSS (NM_001081392) 24 NM_001081392 100019 Mm.24627 NM_133874 ENSMUSG00000058006 Mdn1 4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135 midasin AAA ATPase 1 protein-coding common_peak2_62_68_-0.415154158531335_5.9009473775125_0.765659882660433 chr14 18331143 18332118 + 0.765659882660433 NA intron (NM_009455, intron 1 of 5) CpG 214 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding common_peak2_62_68_-0.415154158531335_5.9009473775125_0.765659882660433-4 chr7 119719917 119720769 + 0.765659882660433 NA intron (NM_145585, intron 2 of 4) CpG 3276 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding common_peak2_62_68_-0.415154158531335_5.9009473775125_0.765659882660433-2 chr2 152331915 152332695 + 0.765659882660433 NA 5' UTR (NM_001083921, exon 1 of 12) 5' UTR (NM_001083921, exon 1 of 12) 120 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding common_peak1_62_68_-0.415154158531335_5.9009473775125_0.765659882660433 chr13 45681166 45682065 + 0.765659882660433 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 174171 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak2_62_68_-0.415154158531335_5.9009473775125_0.765659882660433-3 chr6 57702519 57703715 + 0.765659882660433 NA exon (NM_133737, exon 1 of 9) exon (NM_133737, exon 1 of 9) 662 NM_133737 71835 Mm.274904 NM_133737 ENSMUSG00000062190 Lancl2 1700003F10Rik LanC (bacterial lantibiotic synthetase component C)-like 2 protein-coding common_peak2_82_52_0.360403166327719_5.90812203772706_0.76565988266042 chr12 91590304 91590833 + 0.76565988266042 NA promoter-TSS (NM_031391) promoter-TSS (NM_031391) -81 NM_175335 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak1_82_52_0.360403166327719_5.90812203772706_0.76565988266042 chr1 170214694 170215366 + 0.76565988266042 NA promoter-TSS (NM_001360809) promoter-TSS (NM_001360809) -296 NM_001360809 16589 Mm.209150 NM_010633 ENSMUSG00000026667 Uhmk1 4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|C820018A03Rik|KIS|Kist|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding common_peak1_82_52_0.360403166327719_5.90812203772706_0.76565988266042-2 chr18 60749442 60750949 + 0.76565988266042 NA Intergenic ID_B1|SINE|B4 -1530 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_82_52_0.360403166327719_5.90812203772706_0.76565988266042-2 chr17 26606000 26606865 + 0.76565988266042 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 44920 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_64_39_0.416211998748385_5.53003409426156_0.765450243834444 chr15 51951848 51952391 + 0.765450243834444 NA Intergenic Intergenic 39641 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak1_64_39_0.416211998748385_5.53003409426156_0.765450243834444-5 chr6 91213765 91214930 + 0.765450243834444 NA intron (NM_007992, intron 1 of 17) intron (NM_007992, intron 1 of 17) 1583 NM_007992 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_64_39_0.416211998748385_5.53003409426156_0.765450243834444 chr13 98015704 98016131 + 0.765450243834444 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 190248 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_46_53_-0.481226198861414_5.51427440273276_0.765450243834444-2 chr16 11024247 11024843 + 0.765450243834444 NA Intergenic Intergenic 15647 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak1_64_39_0.416211998748385_5.53003409426156_0.765450243834444-6 chr7 27731458 27731948 + 0.765450243834444 NA intron (NM_009560, intron 1 of 4) intron (NM_009560, intron 1 of 4) 294 NM_009560 22718 Mm.66913 NM_009560 ENSMUSG00000037640 Zfp60 6330516O17Rik|AI426106|AI449354|Mfg-3|Mfg3 zinc finger protein 60 protein-coding common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444-4 chr4 115827729 115828375 + 0.765450243834444 NA promoter-TSS (NM_175308) promoter-TSS (NM_175308) -40 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444-6 chr5 64093037 64093766 + 0.765450243834444 NA intron (NM_025700, intron 1 of 13) intron (NM_025700, intron 1 of 13) 462 NM_001356964 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444-2 chr16 21338354 21339381 + 0.765450243834444 NA Intergenic MIRc|SINE|MIR -5511 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak2_46_53_-0.481226198861414_5.51427440273276_0.765450243834444-4 chr8 71611231 71612124 + 0.765450243834444 NA intron (NM_146211, intron 1 of 11) intron (NM_146211, intron 1 of 11) 653 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444-7 chr9 106372049 106372678 + 0.765450243834444 NA intron (NM_153459, intron 2 of 2) intron (NM_153459, intron 2 of 2) 3731 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_46_53_-0.481226198861414_5.51427440273276_0.765450243834444-2 chr4 86634618 86634969 + 0.765450243834444 NA Intergenic Intergenic -22738 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444 chr15 81466348 81466613 + 0.765450243834444 NA intron (NM_019712, intron 1 of 4) CpG 164 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444-5 chr5 136569155 136570002 + 0.765450243834444 NA Intergenic Intergenic -2088 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444-5 chr3 96263628 96263989 + 0.765450243834444 NA promoter-TSS (NM_033596) promoter-TSS (NM_033596) -491 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak1_64_39_0.416211998748385_5.53003409426156_0.765450243834444-4 chr6 15720736 15721567 + 0.765450243834444 NA intron (NM_175088, intron 1 of 4) CpG 490 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444 chr10 18318822 18319645 + 0.765450243834444 NA Intergenic CpG -84252 NM_144820 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding common_peak1_64_39_0.416211998748385_5.53003409426156_0.765450243834444-2 chr3 135658048 135658745 + 0.765450243834444 NA intron (NM_008689, intron 5 of 24) intron (NM_008689, intron 5 of 24) 33151 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444-3 chr19 37057118 37057718 + 0.765450243834444 NA intron (NM_198300, intron 8 of 10) intron (NM_198300, intron 8 of 10) -116425 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA common_peak1_46_53_-0.481226198861414_5.51427440273276_0.765450243834444 chr16 23127842 23128167 + 0.765450243834444 NA promoter-TSS (NM_145480) promoter-TSS (NM_145480) -274 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444-2 chr11 72489185 72489610 + 0.765450243834444 NA intron (NM_153060, intron 1 of 12) CpG 523 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444-3 chr2 39008142 39008611 + 0.765450243834444 NA intron (NM_028809, intron 1 of 3) CpG 237 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding common_peak1_64_39_0.416211998748385_5.53003409426156_0.765450243834444-3 chr5 124530709 124531694 + 0.765450243834444 NA 5' UTR (NM_021430, exon 1 of 7) 5' UTR (NM_021430, exon 1 of 7) 190 NM_021430 75695 Mm.41180 NM_021430 ENSMUSG00000029392 Rilpl1 2900002H16Rik|6330559I19Rik|GOSPEL Rab interacting lysosomal protein-like 1 protein-coding common_peak2_46_53_-0.481226198861414_5.51427440273276_0.765450243834444-3 chr7 128611433 128612121 + 0.765450243834444 NA intron (NM_178641, intron 1 of 19) CpG 412 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding common_peak2_63_39_0.394001990183945_5.51892908997934_0.765450243834444-4 chr2 52857849 52858638 + 0.765450243834444 NA exon (NM_172409, exon 1 of 27) exon (NM_172409, exon 1 of 27) 375 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444-7 chr9 41589242 41590360 + 0.765450243834444 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 7875 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak1_63_39_0.394001990183945_5.51892908997934_0.765450243834444-6 chr7 109166428 109167301 + 0.765450243834444 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 3648 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding common_peak2_64_39_0.416211998748385_5.53003409426156_0.765450243834444-2 chr7 128320769 128321309 + 0.765450243834444 NA Intergenic Intergenic -22908 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_46_53_-0.481226198861414_5.51427440273276_0.765450243834444 chr14 76714014 76714785 + 0.765450243834444 NA Intergenic Intergenic 36831 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak2_81_85_-0.35530518710166_6.24861216115127_0.764984435653934-2 chr5 9160721 9161544 + 0.764984435653934 NA intron (NR_152859, intron 1 of 16) CpG 644 NR_152860 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding common_peak1_81_85_-0.35530518710166_6.24861216115127_0.764984435653934 chr9 35211248 35212000 + 0.764984435653934 NA promoter-TSS (NM_001291449) promoter-TSS (NM_001291449) 421 NM_026130 67398 Mm.284688 NM_026130 ENSMUSG00000032042 Srpr 1300011P19Rik|D11Mgi27|Srpra signal recognition particle receptor ('docking protein') protein-coding common_peak2_81_85_-0.35530518710166_6.24861216115127_0.764984435653934 chr19 47730801 47731504 + 0.764984435653934 NA promoter-TSS (NM_026377) promoter-TSS (NM_026377) -604 NM_026377 67788 Mm.181610 NM_026377 ENSMUSG00000025066 Sfr1 6330577E15Rik|Meir5 SWI5 dependent recombination repair 1 protein-coding unique_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-5 chr8 94704994 94705547 + 0.764896383020199 NA Intergenic Intergenic -9028 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-3 chr10 123196614 123196941 + 0.764896383020199 NA intron (NM_001301628, intron 1 of 20) CpG 242 NM_027604 14479 Mm.244209 NM_027604 ENSMUSG00000020124 Usp15 4921514G19Rik|AI327321|E430033I05Rik|Gcap18 ubiquitin specific peptidase 15 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-11 chr7 84520297 84520945 + 0.764896383020199 NA Intergenic Intergenic -8333 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-8 chr7 67616398 67616759 + 0.764896383020199 NA intron (NM_027413, intron 5 of 5) intron (NM_027413, intron 5 of 5) 28658 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-4 chr4 62520239 62520519 + 0.764896383020199 NA promoter-TSS (NM_008525) promoter-TSS (NM_008525) -316 NM_008525 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199 chr1 163402836 163403424 + 0.764896383020199 NA intron (NM_178883, intron 1 of 4) intron (NM_178883, intron 1 of 4) 539 NR_132627 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-7 chr4 156130488 156130825 + 0.764896383020199 NA 5' UTR (NM_001220499, exon 1 of 2) 5' UTR (NM_001220499, exon 1 of 2) 3168 NM_001220499 100045778 NM_001220499 ENSMUSG00000110404 Rnf223 9930005F22Rik ring finger 223 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-5 chr2 38536718 38537505 + 0.764896383020199 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 25235 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-3 chr2 28245029 28245570 + 0.764896383020199 NA Intergenic Intergenic 39610 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-3 chr3 95665038 95665829 + 0.764896383020199 NA Intergenic Intergenic 6712 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-5 chr12 80222399 80223015 + 0.764896383020199 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 37664 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-10 chr4 132397572 132398037 + 0.764896383020199 NA intron (NM_001161797, intron 2 of 12) intron (NM_001161797, intron 2 of 12) 24642 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-3 chr11 93940674 93941055 + 0.764896383020199 NA intron (NM_134012, intron 15 of 15) intron (NM_134012, intron 15 of 15) 14919 NM_001077529 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding unique_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-2 chr15 81071104 81071549 + 0.764896383020199 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 33721 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-6 chr2 69077542 69077922 + 0.764896383020199 NA intron (NM_001347161, intron 8 of 10) intron (NM_001347161, intron 8 of 10) -58068 NM_181547 329416 Mm.90047 NM_181547 ENSMUSG00000034738 Nostrin Daip2|mDaIP2 nitric oxide synthase trafficker protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-11 chr6 58832093 58832668 + 0.764896383020199 NA intron (NM_001361967, intron 1 of 22) intron (NM_001361967, intron 1 of 22) 915 NM_001361966 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-5 chr17 65783534 65783885 + 0.764896383020199 NA intron (NR_152099, intron 2 of 20) CpG-6545 354 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-2 chr19 53556923 53557307 + 0.764896383020199 NA Intergenic Intergenic 27797 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-9 chr9 108305637 108305940 + 0.764896383020199 NA promoter-TSS (NM_016802) promoter-TSS (NM_016802) 371 NM_133986 102791 Mm.24670 NM_133986 ENSMUSG00000039461 Tcta 9130410M22Rik|AW553637|C85065|Tctal T cell leukemia translocation altered gene protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199 chr1 62703372 62703806 + 0.764896383020199 NA 5' UTR (NM_010939, exon 1 of 16) 5' UTR (NM_010939, exon 1 of 16) 272 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-4 chr4 150745613 150746064 + 0.764896383020199 NA Intergenic Intergenic -93664 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-4 chr11 62624095 62624688 + 0.764896383020199 NA intron (NM_198861, intron 1 of 3) intron (NM_198861, intron 1 of 3) 19861 NR_028541 100217444 NR_028541 Snord65 MBII-135|snoRNA135 small nucleolar RNA, C/D box 65 snoRNA common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-3 chr18 75378507 75378951 + 0.764896383020199 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 11364 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-12 chr9 20642166 20642630 + 0.764896383020199 NA promoter-TSS (NR_153857) promoter-TSS (NR_153857) -319 NM_001361025 66177 Mm.390165 NM_025401 ENSMUSG00000084786 Ubl5 1110030M22Rik|beacon ubiquitin-like 5 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-6 chr2 52938830 52939302 + 0.764896383020199 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 81198 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-10 chr9 122373711 122374192 + 0.764896383020199 NA intron (NR_152865, intron 2 of 5) intron (NR_152865, intron 2 of 5) 22335 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding common_peak1_27_34_-0.597583923153041_4.83049105536845_0.764896383020199 chr16 57562890 57563337 + 0.764896383020199 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 13871 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-2 chr3 40846961 40847535 + 0.764896383020199 NA promoter-TSS (NM_028140) promoter-TSS (NM_028140) 249 NR_038067 100039027 Mm.482948 NR_038067 Gm2011 - predicted gene 2011 pseudo common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-6 chr17 65783498 65783873 + 0.764896383020199 NA intron (NR_152099, intron 2 of 20) CpG-6545 330 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-4 chr8 45975627 45976022 + 0.764896383020199 NA promoter-TSS (NM_001033148) promoter-TSS (NM_001033148) 296 NM_138668 192169 Mm.210882 NM_138668 ENSMUSG00000031634 Ufsp2 1810047C23Rik UFM1-specific peptidase 2 protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-4 chr12 79976320 79976638 + 0.764896383020199 NA Intergenic Intergenic -40215 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-8 chr2 69077547 69077944 + 0.764896383020199 NA intron (NM_001347161, intron 8 of 10) intron (NM_001347161, intron 8 of 10) -58055 NM_181547 329416 Mm.90047 NM_181547 ENSMUSG00000034738 Nostrin Daip2|mDaIP2 nitric oxide synthase trafficker protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-2 chr10 77570561 77571044 + 0.764896383020199 NA Intergenic Intergenic -10853 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-9 chr3 27718196 27719012 + 0.764896383020199 NA Intergenic ID_B1|SINE|B4 -8152 NM_173182 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-7 chr3 88831154 88831480 + 0.764896383020199 NA intron (NR_015498, intron 1 of 1) intron (NR_015498, intron 1 of 1) 1170 NR_015498 319830 Mm.400394 NR_015498 1500004A13Rik 5430404N14Rik|BB132176 RIKEN cDNA 1500004A13 gene ncRNA common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-10 chr7 16311989 16312485 + 0.764896383020199 NA exon (NM_133234, exon 2 of 4) exon (NM_133234, exon 2 of 4) 2654 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-9 chr7 12977467 12978019 + 0.764896383020199 NA promoter-TSS (NM_001168561) promoter-TSS (NM_001168561) -105 NM_175558 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-13 chr9 108578277 108578624 + 0.764896383020199 NA TTS (NM_028944) TTS (NM_028944) 220 NM_031392 83669 Mm.335454 NM_031392 ENSMUSG00000066357 Wdr6 mWDR6 WD repeat domain 6 protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199-7 chr19 32756948 32757267 + 0.764896383020199 NA promoter-TSS (NM_008960) promoter-TSS (NM_008960) -470 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-8 chr5 24843109 24843565 + 0.764896383020199 NA promoter-TSS (NM_053075) promoter-TSS (NM_053075) -976 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-3 chr4 136139797 136140256 + 0.764896383020199 NA Intergenic Intergenic -3796 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199 chr14 76930490 76931449 + 0.764896383020199 NA Intergenic Intergenic 105648 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-4 chr19 25137528 25138150 + 0.764896383020199 NA intron (NM_028785, intron 23 of 47) intron (NM_028785, intron 23 of 47) -99136 NM_181404 107351 Mm.260722 NM_181404 ENSMUSG00000032702 Kank1 A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172 KN motif and ankyrin repeat domains 1 protein-coding common_peak2_27_34_-0.597583923153041_4.83049105536845_0.764896383020199-2 chr12 54710015 54710279 + 0.764896383020199 NA Intergenic Intergenic -14253 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_40_23_0.493052046452526_4.83148852394742_0.764896383020199-2 chr11 53308627 53308989 + 0.764896383020199 NA Intergenic Intergenic -8329 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199 chr10 59800535 59800872 + 0.764896383020199 NA intron (NM_001359267, intron 8 of 11) intron (NM_001359267, intron 8 of 11) -78888 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding unique_peak1_40_23_0.493052046452526_4.83148852394742_0.764896383020199 chr14 20673744 20674175 + 0.764896383020199 NA promoter-TSS (NM_001168273) promoter-TSS (NM_001168273) -362 NM_172596 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak2_179_123_0.24306187789322_7.07572724933349_0.76488941704003 chr10 60819703 60821632 + 0.76488941704003 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 10914 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_113_114_-0.302545973745018_6.69421706407187_0.764444856400014 chr8 107587318 107588491 + 0.764444856400014 NA intron (NM_010817, intron 1 of 6) intron (NM_010817, intron 1 of 6) 578 NM_010817 17463 Mm.18347 NM_010817 ENSMUSG00000039067 Psmd7 AW107203|Mov-34|Mov34 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding common_peak2_138_93_0.272388199705449_6.69078295153036_0.764444856399989 chr11 96251146 96252273 + 0.764444856399989 NA promoter-TSS (NR_037977) promoter-TSS (NR_037977) 49 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA common_peak1_126_84_0.288248685436214_6.55351527885581_0.7639208351918 chr1 132330052 132332314 + 0.7639208351918 NA intron (NM_001195025, intron 7 of 7) intron (NM_001195025, intron 7 of 7) 15058 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_102_104_-0.316658152607896_6.55591644136218_0.7639208351918 chr7 98692500 98693538 + 0.7639208351918 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 9909 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak1_102_104_-0.316658152607896_6.55591644136218_0.7639208351918 chr1 172499910 172500972 + 0.7639208351918 NA intron (NM_178598, intron 1 of 4) CpG 195 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding common_peak1_372_340_-0.172607061243641_8.32732439840235_0.763609847894235 chr8 84660423 84662695 + 0.763609847894235 NA 3' UTR (NM_010499, exon 1 of 1) 3' UTR (NM_010499, exon 1 of 1) 1293 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak1_33_40_-0.547721147281632_5.08369143097727_0.763288167491253 chr14 30479686 30480063 + 0.763288167491253 NA intron (NM_133761, intron 1 of 9) CpG 309 NM_133761 75901 Mm.28733 NM_133761 ENSMUSG00000021962 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping mRNA 1A protein-coding common_peak1_33_40_-0.547721147281632_5.08369143097727_0.763288167491253-3 chr2 58567163 58567670 + 0.763288167491253 NA promoter-TSS (NM_001110205) promoter-TSS (NM_001110205) 82 NM_001289660 76654 Mm.200370 NM_029692 ENSMUSG00000026839 Upp2 1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding common_peak1_33_40_-0.547721147281632_5.08369143097727_0.763288167491253-2 chr15 99818063 99818614 + 0.763288167491253 NA intron (NM_001113545, intron 4 of 10) intron (NM_001113545, intron 4 of 10) 1811 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_33_40_-0.547721147281632_5.08369143097727_0.763288167491253 chr10 67549516 67550053 + 0.763288167491253 NA promoter-TSS (NM_001005419) promoter-TSS (NM_001005419) -829 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_33_40_-0.547721147281632_5.08369143097727_0.763288167491253-2 chr7 29953568 29954042 + 0.763288167491253 NA intron (NM_178384, intron 1 of 5) CpG 260 NM_178384 72723 Mm.371648 NM_178384 ENSMUSG00000059975 Zfp74 2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77|zfp-74 zinc finger protein 74 protein-coding common_peak1_48_28_0.475377148238483_5.09566956924681_0.763288167491247-2 chr12 51970585 51971236 + 0.763288167491247 NA intron (NM_177171, intron 1 of 35) CpG 411 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding common_peak2_47_28_0.445839671744434_5.08090083099979_0.763288167491247 chr11 96291639 96292243 + 0.763288167491247 NA intron (NR_131758, intron 2 of 2) intron (NR_131758, intron 2 of 2) 5295 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak2_48_28_0.475377148238483_5.09566956924681_0.763288167491247-3 chr2 165854902 165855568 + 0.763288167491247 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 2938 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_47_28_0.445839671744434_5.08090083099979_0.763288167491247-4 chr6 146501735 146502057 + 0.763288167491247 NA 5' UTR (NM_010586, exon 1 of 56) 5' UTR (NM_010586, exon 1 of 56) 327 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding unique_peak1_47_28_0.445839671744434_5.08090083099979_0.763288167491247 chr1 92641435 92642262 + 0.763288167491247 NA promoter-TSS (NR_028108) promoter-TSS (NR_028108) 100 NR_028108 66915 Mm.30179 NM_001163425 ENSMUSG00000073616 Cops9 1110002M09Rik|Myeov2 COP9 signalosome subunit 9 protein-coding common_peak2_48_28_0.475377148238483_5.09566956924681_0.763288167491247 chr18 75598298 75598728 + 0.763288167491247 NA intron (NM_201354, intron 6 of 11) intron (NM_201354, intron 6 of 11) 83868 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_47_28_0.445839671744434_5.08090083099979_0.763288167491247-3 chr3 88913410 88913858 + 0.763288167491247 NA exon (NM_144898, exon 2 of 14) exon (NM_144898, exon 2 of 14) 316 NM_144898 229524 Mm.440405 NM_144898 ENSMUSG00000068922 Msto1 BC008103|mst misato 1, mitochondrial distribution and morphology regulator protein-coding common_peak1_47_28_0.445839671744434_5.08090083099979_0.763288167491247-2 chr15 80710786 80711002 + 0.763288167491247 NA promoter-TSS (NM_144812) promoter-TSS (NM_144812) -419 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_48_28_0.475377148238483_5.09566956924681_0.763288167491247-4 chr6 31147981 31148382 + 0.763288167491247 NA intron (NR_110471, intron 2 of 3) intron (NR_110471, intron 2 of 3) 70293 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_47_28_0.445839671744434_5.08090083099979_0.763288167491247-4 chr9 121760169 121760750 + 0.763288167491247 NA promoter-TSS (NR_033503) promoter-TSS (NR_033503) 426 NM_001166644 270210 Mm.473702 NM_001166644 ENSMUSG00000013419 Zfp651 4732420M22Rik|BC030045|R74626 zinc finger protein 651 protein-coding common_peak1_47_28_0.445839671744434_5.08090083099979_0.763288167491247-3 chr3 51150760 51151239 + 0.763288167491247 NA Intergenic Intergenic -73448 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_48_28_0.475377148238483_5.09566956924681_0.763288167491247-2 chr19 4172651 4173206 + 0.763288167491247 NA intron (NM_134148, intron 3 of 9) intron (NM_134148, intron 3 of 9) 2551 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding common_peak1_48_28_0.475377148238483_5.09566956924681_0.763288167491247 chr11 69672725 69673241 + 0.763288167491247 NA promoter-TSS (NM_144958) promoter-TSS (NM_144958) -560 NM_001159375 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding unique_peak1_47_28_0.445839671744434_5.08090083099979_0.763288167491247-2 chr19 36127722 36128371 + 0.763288167491247 NA Intergenic Intergenic -8202 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_48_28_0.475377148238483_5.09566956924681_0.763288167491247-3 chr4 143288363 143288939 + 0.763288167491247 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 10913 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding common_peak2_48_28_0.475377148238483_5.09566956924681_0.763288167491247-4 chr9 108566744 108567305 + 0.763288167491247 NA 5' UTR (NM_023247, exon 1 of 5) 5' UTR (NM_023247, exon 1 of 5) 318 NM_023247 66706 Mm.29471 NM_023247 ENSMUSG00000070283 Ndufaf3 4733401H18Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 protein-coding common_peak2_47_28_0.445839671744434_5.08090083099979_0.763288167491247-2 chr13 63154484 63154972 + 0.763288167491247 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) -85301 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_47_28_0.445839671744434_5.08090083099979_0.763288167491247 chr1 170163878 170164666 + 0.763288167491247 NA intron (NM_133806, intron 2 of 10) intron (NM_133806, intron 2 of 10) 10692 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_166_113_0.256982357861803_6.96138119309564_0.763017141132993 chr4 150000891 150001973 + 0.763017141132993 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 1804 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_313_289_-0.185546758563772_8.08713571073305_0.762768768360878 chr16 31597325 31599841 + 0.762768768360878 NA Intergenic Intergenic -19550 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak1_92_95_-0.333677358940919_6.4181238212507_0.760399892927139 chr13 41660527 41661814 + 0.760399892927139 NA Intergenic Intergenic 54954 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak1_92_95_-0.333677358940919_6.4181238212507_0.760399892927139-2 chr2 158138409 158139589 + 0.760399892927139 NA intron (NM_009373, intron 2 of 12) intron (NM_009373, intron 2 of 12) 7393 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_115_76_0.301071501109121_6.41732229124946_0.760399892927114 chr13 92530386 92531359 + 0.760399892927114 NA promoter-TSS (NM_173392) promoter-TSS (NM_173392) -62 NM_173392 218441 Mm.259585 NM_173392 ENSMUSG00000021706 Zfyve16 AI035632|B130024H06Rik|B130031L15|mKIAA0305 zinc finger, FYVE domain containing 16 protein-coding common_peak1_93_60_0.335868986165924_6.09867183064585_0.760282562501395 chr4 86672097 86673024 + 0.760282562501395 NA Intergenic Intergenic -2501 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_93_60_0.335868986165924_6.09867183064585_0.760282562501395-2 chr4 141303555 141304463 + 0.760282562501395 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 2788 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak2_72_77_-0.380986783296322_6.09490882721409_0.760282562501383-2 chr4 134760027 134760808 + 0.760282562501383 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 7587 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_72_77_-0.380986783296322_6.09490882721409_0.760282562501383 chr15 59776920 59778016 + 0.760282562501383 NA Intergenic Intergenic 17491 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_72_77_-0.380986783296322_6.09490882721409_0.760282562501383 chr4 32099692 32101005 + 0.760282562501383 NA Intergenic Intergenic 136241 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_260_243_-0.201208091303954_7.83013329191091_0.760019545074431 chr6 108534142 108536980 + 0.760019545074431 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 45818 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_114_115_-0.302525774150683_6.70671810805223_0.75999517126277 chr3 30968343 30969460 + 0.75999517126277 NA intron (NM_001165954, intron 1 of 14) CpG 514 NM_001165954 241915 Mm.233173 NM_153421 ENSMUSG00000037652 Phc3 E030046K01Rik|Edr3|Hph3 polyhomeotic 3 protein-coding common_peak2_139_137_-0.271278423378853_6.97288524508874_0.759325568368282 chr5 121544953 121546313 + 0.759325568368282 NA 5' UTR (NM_010765, exon 1 of 14) 5' UTR (NM_010765, exon 1 of 14) 259 NM_010765 17165 Mm.272206 NM_010765 ENSMUSG00000029454 Mapkapk5 MK5|PRAK MAP kinase-activated protein kinase 5 protein-coding common_peak2_73_46_0.36931690980656_5.73924730658092_0.759155512401768-2 chr19 59346028 59346525 + 0.759155512401768 NA promoter-TSS (NM_001033222) promoter-TSS (NM_001033222) -496 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak2_73_46_0.36931690980656_5.73924730658092_0.759155512401768 chr10 128322517 128323033 + 0.759155512401768 NA 5' UTR (NM_019953, exon 1 of 6) 5' UTR (NM_019953, exon 1 of 6) 316 NM_019953 56530 Mm.44220 NM_019953 ENSMUSG00000025381 Cnpy2 5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9 canopy FGF signaling regulator 2 protein-coding common_peak2_55_61_-0.429552196168195_5.73942021230278_0.759155512401768 chr1 9545435 9546207 + 0.759155512401768 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 413 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding common_peak2_55_61_-0.429552196168195_5.73942021230278_0.759155512401768-2 chr8 3606157 3607118 + 0.759155512401768 NA exon (NM_001163749, exon 13 of 17) exon (NM_001163749, exon 13 of 17) 14659 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak2_73_46_0.36931690980656_5.73924730658092_0.759155512401768-3 chr4 149999782 150000334 + 0.759155512401768 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 3178 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_73_46_0.36931690980656_5.73924730658092_0.759155512401768 chr11 69914030 69914805 + 0.759155512401768 NA TTS (NM_001291119) TTS (NM_001291119) 383 NM_019726 56310 Mm.477738 NM_019726 ENSMUSG00000023170 Gps2 AI505953|GPS-2 G protein pathway suppressor 2 protein-coding common_peak1_55_61_-0.429552196168195_5.73942021230278_0.759155512401768 chr3 51339966 51340637 + 0.759155512401768 NA intron (NM_023502, intron 1 of 9) CpG 343 NM_001356358 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_73_46_0.36931690980656_5.73924730658092_0.759155512401768-2 chr13 25019882 25020869 + 0.759155512401768 NA promoter-TSS (NM_001013389) promoter-TSS (NM_001013389) -58 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding common_peak2_73_46_0.36931690980656_5.73924730658092_0.759155512401768-4 chr5 136198385 136199049 + 0.759155512401768 NA intron (NM_025774, intron 1 of 5) CpG 237 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding common_peak2_103_105_-0.316492239254575_6.56967433493591_0.759030078841297 chr16 24497054 24498845 + 0.759030078841297 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -31365 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_103_105_-0.316492239254575_6.56967433493591_0.759030078841297-2 chr6 50381790 50382770 + 0.759030078841297 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 557 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_128_85_0.293758398161545_6.57314395378287_0.759030078841272 chr11 3451037 3452762 + 0.759030078841272 NA promoter-TSS (NR_028317) promoter-TSS (NR_028317) -538 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA common_peak2_82_86_-0.35461987495781_6.26563355836982_0.75893119007263 chr12 112576677 112577816 + 0.75893119007263 NA Intergenic Intergenic -11538 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_82_86_-0.35461987495781_6.26563355836982_0.75893119007263-2 chr19 17262838 17263648 + 0.75893119007263 NA Intergenic Intergenic 76262 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_104_68_0.316612158421846_6.26683053598909_0.75893119007263 chr17 29614924 29615797 + 0.75893119007263 NA intron (NM_021419, intron 1 of 7) intron (NM_021419, intron 1 of 7) 571 NM_021419 58230 Mm.305994 NM_021419 ENSMUSG00000090083 Rnf8 3830404E21Rik|AIP37|laXp180 ring finger protein 8 protein-coding common_peak1_82_86_-0.35461987495781_6.26563355836982_0.75893119007263 chr4 152185890 152186684 + 0.75893119007263 NA exon (NM_001146057, exon 1 of 9) exon (NM_001146057, exon 1 of 9) 153 NM_001146057 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_82_86_-0.35461987495781_6.26563355836982_0.75893119007263-2 chr6 39117727 39118777 + 0.75893119007263 NA promoter-TSS (NM_172893) promoter-TSS (NM_172893) 97 NM_172893 243771 Mm.268462 NM_172893 ENSMUSG00000038507 Parp12 9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 protein-coding common_peak1_104_68_0.316612158421846_6.26683053598909_0.75893119007263 chr11 96309621 96311091 + 0.75893119007263 NA Intergenic Intergenic -3446 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA common_peak2_153_104_0.259533954931823_6.84401249513203_0.758682686219332 chr9 8003001 8004649 + 0.758682686219332 NA intron (NM_009534, intron 1 of 7) CpG 771 NM_009534 22601 Mm.221992 NM_009534 ENSMUSG00000053110 Yap1 AI325207|Yap|Yap65|Yki|Yorkie yes-associated protein 1 protein-coding common_peak1_153_104_0.259533954931823_6.84401249513203_0.758682686219332 chr4 94602424 94603520 + 0.758682686219332 NA exon (NM_172695, exon 1 of 14) exon (NM_172695, exon 1 of 14) 275 NM_172695 18786 Mm.490101 NM_172695 ENSMUSG00000028577 Plaa 2410007N06|AI536418|AU018445|AW208417|D4Ertd618e|PLA2P|PLAP|Ufd3 phospholipase A2, activating protein protein-coding common_peak2_152_149_-0.264371608277763_7.096632886357_0.758100214244447 chr8 31149696 31151456 + 0.758100214244447 NA non-coding (NR_103719, exon 1 of 8) non-coding (NR_103719, exon 1 of 8) 260 NR_103719 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding common_peak2_63_69_-0.413352931873659_5.92260655100814_0.75799847406288 chr13 74316670 74317637 + 0.75799847406288 NA exon (NM_011051, exon 1 of 6) exon (NM_011051, exon 1 of 6) 173 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding common_peak1_83_53_0.350592214282668_5.9301836093048_0.75799847406288-3 chr4 134669313 134670613 + 0.75799847406288 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 34327 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_83_53_0.350592214282668_5.9301836093048_0.75799847406288 chr1 62722386 62723875 + 0.75799847406288 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 19813 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_64_69_-0.391142923309219_5.93371155529036_0.75799847406288-2 chr5 77387955 77388679 + 0.75799847406288 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 19728 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_64_69_-0.391142923309219_5.93371155529036_0.75799847406288 chr8 45001859 45002699 + 0.75799847406288 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 52071 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_64_69_-0.391142923309219_5.93371155529036_0.75799847406288 chr17 28621753 28622458 + 0.75799847406288 NA intron (NM_016795, intron 1 of 15) CpG-6184 416 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding common_peak1_83_53_0.350592214282668_5.9301836093048_0.75799847406288-2 chr4 107453364 107454179 + 0.75799847406288 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 19052 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_83_53_0.350592214282668_5.9301836093048_0.75799847406288 chr10 127739603 127740424 + 0.75799847406288 NA intron (NM_198035, intron 1 of 1) CpG 475 NM_198035 320080 Mm.27258 NM_198035 ENSMUSG00000044617 Zbtb39 7030401O21Rik|mKIAA0352 zinc finger and BTB domain containing 39 protein-coding common_peak1_424_307_0.161193175429574_8.34738312840969_0.757919131125291 chr7 66387026 66389889 + 0.757919131125291 NA promoter-TSS (NM_146191) promoter-TSS (NM_146191) -116 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding common_peak2_228_215_-0.212729174151274_7.64852291508783_0.756841342614753 chr13 34651107 34653436 + 0.756841342614753 NA promoter-TSS (NR_105041) promoter-TSS (NR_105041) 410 NM_025831 66895 Mm.28943 NM_025831 ENSMUSG00000021411 Pxdc1 1300014I06Rik PX domain containing 1 protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-11 chr7 90303207 90303821 + 0.756750750680359 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 1159 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359-4 chr3 28781414 28781645 + 0.756750750680359 NA intron (NM_177586, intron 1 of 4) CpG 252 NM_177586 208691 Mm.193670 NM_177586 ENSMUSG00000050192 Eif5a2 9630038B20|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-3 chr11 100355795 100356439 + 0.756750750680359 NA promoter-TSS (NM_177981) promoter-TSS (NM_177981) 11 NM_001359052 15114 Mm.281700 NM_010404 ENSMUSG00000006930 Hap1 HAP-1 huntingtin-associated protein 1 protein-coding unique_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-2 chr19 41445174 41445878 + 0.756750750680359 NA Intergenic Intergenic -60456 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding unique_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-3 chr3 31060997 31061300 + 0.756750750680359 NA Intergenic Intergenic 22182 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359 chr13 69584676 69585032 + 0.756750750680359 NA intron (NM_175283, intron 4 of 4) intron (NM_175283, intron 4 of 4) 26609 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding unique_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-4 chr9 32032828 32033378 + 0.756750750680359 NA Intergenic Intergenic -83033 NM_001195632 330914 Mm.46683 NM_177379 ENSMUSG00000041444 Arhgap32 3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap Rho GTPase activating protein 32 protein-coding unique_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359 chr12 35260274 35260736 + 0.756750750680359 NA Intergenic Intergenic -65608 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359-5 chr5 137610998 137611280 + 0.756750750680359 NA intron (NM_008788, intron 1 of 8) intron (NM_008788, intron 1 of 8) 265 NM_008788 18542 Mm.262345 NM_008788 ENSMUSG00000029718 Pcolce Astt-2|Astt2|P14|PCPE-1 procollagen C-endopeptidase enhancer protein protein-coding unique_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359 chr3 22090122 22090675 + 0.756750750680359 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 13746 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-2 chr11 43820892 43821337 + 0.756750750680359 NA intron (NM_007416, intron 1 of 1) intron (NM_007416, intron 1 of 1) 15375 NM_007416 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-3 chr4 45475214 45475737 + 0.756750750680359 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 55353 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359-2 chr15 83158355 83158636 + 0.756750750680359 NA intron (NM_029787, intron 8 of 8) intron (NM_029787, intron 8 of 8) 8850 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA common_peak1_22_29_-0.65698231423902_4.57839943848901_0.756750750680359 chr10 80751784 80752087 + 0.756750750680359 NA Intergenic Intergenic -3268 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-8 chr2 33130043 33130582 + 0.756750750680359 NA intron (NM_001355201, intron 1 of 29) CpG 307 NM_001355200 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359 chr1 162477341 162477964 + 0.756750750680359 NA intron (NM_001038619, intron 1 of 20) CpG 382 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-5 chrX 13064115 13064619 + 0.756750750680359 NA Intergenic Intergenic -7131 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding unique_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-2 chr19 61199544 61199791 + 0.756750750680359 NA Intergenic Intergenic -23358 NM_001177513 633057 Mm.426097 NM_001177513 ENSMUSG00000094649 Gm7102 EG633057 predicted gene 7102 protein-coding unique_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-4 chr7 16738602 16739250 + 0.756750750680359 NA intron (NM_198613, intron 1 of 4) intron (NM_198613, intron 1 of 4) 482 NM_198613 232910 Mm.333597 NM_198613 ENSMUSG00000008036 Ap2s1 AI043088 adaptor-related protein complex 2, sigma 1 subunit protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-7 chr18 4674502 4674851 + 0.756750750680359 NA exon (NM_001081963, exon 3 of 4) exon (NM_001081963, exon 3 of 4) 39747 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak1_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-5 chr6 145249016 145249422 + 0.756750750680359 NA intron (NM_021284, intron 1 of 4) intron (NM_021284, intron 1 of 4) 1012 NM_021284 16653 Mm.383182 NM_021284 ENSMUSG00000030265 Kras AI929937|K-Ras|K-Ras 2|K-ras|Ki-ras|Kras-2|Kras2|c-K-ras|c-Ki-ras|p21B|ras Kirsten rat sarcoma viral oncogene homolog protein-coding common_peak1_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-4 chr6 134927020 134927437 + 0.756750750680359 NA Intergenic CpG -1864 NR_037956 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-10 chr5 33781978 33782582 + 0.756750750680359 NA intron (NM_019694, intron 1 of 13) CpG 424 NM_019694 56384 Mm.260538 NM_019694 ENSMUSG00000005299 Letm1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding common_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359 chr14 49172347 49172788 + 0.756750750680359 NA intron (NM_027492, intron 1 of 4) CpG 321 NM_027492 70646 Mm.275688 NM_027492 ENSMUSG00000036282 Naa30 4930487N19Rik|5730533P17Rik|AI447922|AW322455|Nat12 N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-6 chr17 35810942 35811655 + 0.756750750680359 NA Intergenic Intergenic -10415 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359-6 chr8 92355851 92356127 + 0.756750750680359 NA non-coding (NR_033641, exon 1 of 7) non-coding (NR_033641, exon 1 of 7) 131 NR_110452 71296 Mm.86664 NR_033641 ENSMUSG00000031736 Crnde 4933436C20Rik colorectal neoplasia differentially expressed (non-protein coding) ncRNA common_peak1_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-3 chr2 60748065 60748320 + 0.756750750680359 NA Intergenic Intergenic -25589 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-9 chr3 123334638 123335055 + 0.756750750680359 NA intron (NM_027135, intron 10 of 22) intron (NM_027135, intron 10 of 22) 51144 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding unique_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359 chr19 5726429 5726730 + 0.756750750680359 NA promoter-TSS (NM_053252) promoter-TSS (NM_053252) -262 NM_053252 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-2 chr11 96978091 96978321 + 0.756750750680359 NA promoter-TSS (NM_001080964) promoter-TSS (NM_001080964) -518 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-5 chr14 51960049 51960399 + 0.756750750680359 NA Intergenic Intergenic -24609 NM_001145921 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding common_peak1_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-6 chr7 30563391 30563641 + 0.756750750680359 NA promoter-TSS (NM_025498) promoter-TSS (NM_025498) 176 NM_170760 233073 Mm.34790 NM_170760 ENSMUSG00000078765 U2af1l4 AA407033|AF419339|AI451269|AW553050|U2af26 U2 small nuclear RNA auxiliary factor 1-like 4 protein-coding common_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-3 chr18 8896460 8896791 + 0.756750750680359 NA Intergenic Intergenic -316231 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak1_34_19_0.529427897658441_4.58664204371658_0.756750750680359-4 chr14 20608311 20608836 + 0.756750750680359 NA intron (NM_030180, intron 1 of 20) intron (NM_030180, intron 1 of 20) 9781 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding common_peak2_34_19_0.529427897658441_4.58664204371658_0.756750750680359-3 chr2 29252421 29252880 + 0.756750750680359 NA non-coding (NR_029460, exon 1 of 2) non-coding (NR_029460, exon 1 of 2) 343 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak2_22_29_-0.65698231423902_4.57839943848901_0.756750750680359-2 chr13 93997474 93997771 + 0.756750750680359 NA Intergenic Intergenic -60174 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_543_484_-0.140229998031016_8.85172593805898_0.756177271622233 chr15 59648717 59651454 + 0.756177271622233 NA intron (NM_144549, intron 1 of 2) intron (NM_144549, intron 1 of 2) 1431 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-3 chr16 25532662 25533126 + 0.756118839439552 NA Intergenic Intergenic -150871 NM_001127259 22061 Mm.20894 NM_011641 ENSMUSG00000022510 Trp63 AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1 transformation related protein 63 protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-8 chr9 45849751 45849965 + 0.756118839439552 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 11313 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-9 chr16 94229135 94229558 + 0.756118839439552 NA intron (NM_001360045, intron 6 of 10) intron (NM_001360045, intron 6 of 10) 60945 NM_001360045 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-6 chr6 67105068 67105424 + 0.756118839439552 NA Intergenic Intergenic -67839 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding unique_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552 chr1 133696276 133696506 + 0.756118839439552 NA Intergenic Intergenic -6283 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552 chr11 4293751 4294400 + 0.756118839439552 NA Intergenic Intergenic 27279 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-4 chr11 94969695 94970319 + 0.756118839439552 NA intron (NM_009161, intron 7 of 10) B2_Mm1t|SINE|B2 2414 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-7 chr2 24472515 24472922 + 0.756118839439552 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 2881 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-3 chr11 83938269 83938624 + 0.756118839439552 NA Intergenic Intergenic -3644 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-14 chr7 99316584 99316980 + 0.756118839439552 NA intron (NM_001043355, intron 2 of 2) intron (NM_001043355, intron 2 of 2) 36457 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-4 chr16 62846601 62846897 + 0.756118839439552 NA 5' UTR (NM_026577, exon 1 of 10) 5' UTR (NM_026577, exon 1 of 10) 291 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-6 chr13 34696201 34696573 + 0.756118839439552 NA Intergenic MER63B|DNA|hAT-Blackjack -43255 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-10 chr17 84147780 84148191 + 0.756118839439552 NA Intergenic Intergenic 39962 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-7 chr7 98698370 98698689 + 0.756118839439552 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 4399 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-5 chr13 114447014 114447322 + 0.756118839439552 NA Intergenic Intergenic 11783 NM_001301373 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-3 chr11 59202675 59202932 + 0.756118839439552 NA promoter-TSS (NR_037964) promoter-TSS (NR_037964) 317 NM_001302336 67212 Mm.282694 NM_026035 ENSMUSG00000036860 Mrpl55 2810038N09Rik|L55mt|MRP-L55 mitochondrial ribosomal protein L55 protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-10 chr8 117179042 117179498 + 0.756118839439552 NA intron (NM_001081151, intron 1 of 10) intron (NM_001081151, intron 1 of 10) 21135 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-5 chr11 120150721 120151140 + 0.756118839439552 NA intron (NM_001361699, intron 1 of 16) CpG 421 NM_001361698 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-6 chr17 55959192 55959409 + 0.756118839439552 NA non-coding (NR_108021, exon 1 of 3) intron (NM_028381, intron 1 of 7) 101 NR_108021 100504333 Mm.391908 NR_108021 ENSMUSG00000097077 Gm16712 - predicted gene, 16712 ncRNA common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-2 chr15 81859745 81859962 + 0.756118839439552 NA Intergenic CpG -1527 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-9 chr8 70752644 70752936 + 0.756118839439552 NA Intergenic Intergenic -1889 NM_001328047 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-12 chr3 154692578 154692979 + 0.756118839439552 NA Intergenic Intergenic -18355 NM_175176 209601 Mm.331454 NM_175176 ENSMUSG00000078161 Erich3 1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133 glutamate rich 3 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-8 chr16 57401984 57402320 + 0.756118839439552 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 48875 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-5 chr17 26612343 26612647 + 0.756118839439552 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 50983 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-7 chr16 55633457 55633860 + 0.756118839439552 NA Intergenic Intergenic 138927 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-8 chr7 139252318 139252685 + 0.756118839439552 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 4019 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-11 chr19 56461595 56462043 + 0.756118839439552 NA intron (NM_172641, intron 1 of 12) intron (NM_172641, intron 1 of 12) 182 NM_172641 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-4 chr12 64918271 64918496 + 0.756118839439552 NA intron (NM_001025605, intron 1 of 4) intron (NM_001025605, intron 1 of 4) 472 NM_001025605 217648 Mm.341586 NM_001025605 ENSMUSG00000047227 Gm527 - predicted gene 527 protein-coding common_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552 chr15 78845694 78846056 + 0.756118839439552 NA intron (NM_027219, intron 1 of 2) intron (NM_027219, intron 1 of 2) 3228 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552 chr1 40179207 40179497 + 0.756118839439552 NA Intergenic Intergenic -45728 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-15 chr7 110005179 110005694 + 0.756118839439552 NA intron (NR_037959, intron 1 of 2) intron (NR_037959, intron 1 of 2) 1210 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-2 chr11 33279068 33279477 + 0.756118839439552 NA intron (NR_110973, intron 23 of 28) intron (NR_110973, intron 23 of 28) -75684 NM_019916 27140 Mm.25362 NM_019916 ENSMUSG00000040610 Tlx3 Hox11l2|Rnx|Tlx1l2 T cell leukemia, homeobox 3 protein-coding common_peak2_28_15_0.581968000950511_4.29098400047526_0.756118839439552-2 chr10 21796880 21797179 + 0.756118839439552 NA Intergenic Intergenic -85155 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak1_28_15_0.581968000950511_4.29098400047526_0.756118839439552-13 chr5 111230315 111230778 + 0.756118839439552 NA intron (NM_001267622, intron 9 of 22) intron (NM_001267622, intron 9 of 22) -100151 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-13 chr5 115013398 115013770 + 0.756118839439549 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 2060 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-5 chr14 18499917 18500443 + 0.756118839439549 NA Intergenic (TTAA)n|Simple_repeat|Simple_repeat -168336 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-8 chr15 10751229 10751753 + 0.756118839439549 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 36591 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549 chr1 182518861 182519126 + 0.756118839439549 NA Intergenic Intergenic -1383 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-6 chr14 31668122 31668578 + 0.756118839439549 NA TTS (NM_025295) TTS (NM_025295) 27293 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-12 chr5 36715269 36715523 + 0.756118839439549 NA Intergenic Intergenic -19375 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_17_24_-0.745089961528775_4.27131120901034_0.756118839439549 chr7 126625969 126626179 + 0.756118839439549 NA promoter-TSS (NM_019738) promoter-TSS (NM_019738) -604 NM_019738 56312 Mm.18742 NM_019738 ENSMUSG00000030717 Nupr1 2310032H04Rik|Com1|p8 nuclear protein transcription regulator 1 protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-10 chr4 11771469 11771823 + 0.756118839439549 NA intron (NM_019753, intron 3 of 17) intron (NM_019753, intron 3 of 17) 13489 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak1_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-2 chr8 72145917 72146136 + 0.756118839439549 NA intron (NM_001001491, intron 4 of 7) intron (NM_001001491, intron 4 of 7) 10734 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-7 chr3 130053400 130053677 + 0.756118839439549 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 7369 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-2 chr11 51857867 51858166 + 0.756118839439549 NA promoter-TSS (NM_199299) promoter-TSS (NM_199299) -386 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-5 chr19 59879841 59880158 + 0.756118839439549 NA Intergenic Intergenic 63365 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-4 chr17 83147652 83148371 + 0.756118839439549 NA Intergenic Intergenic -67272 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-9 chr18 75464097 75464718 + 0.756118839439549 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -50238 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-8 chr5 66586777 66587147 + 0.756118839439549 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 31855 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-2 chr10 34507544 34507828 + 0.756118839439549 NA intron (NM_001358769, intron 2 of 8) intron (NM_001358769, intron 2 of 8) 24286 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-7 chr14 43249579 43249957 + 0.756118839439549 NA Intergenic Intergenic 98043 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-6 chr2 122375880 122376241 + 0.756118839439549 NA Intergenic Intergenic -7142 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-3 chr11 52335636 52335910 + 0.756118839439549 NA Intergenic Intergenic -25089 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-3 chr13 52765208 52765543 + 0.756118839439549 NA Intergenic Intergenic -8170 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-11 chr8 31842827 31843094 + 0.756118839439549 NA intron (NM_178591, intron 2 of 8) intron (NM_178591, intron 2 of 8) 75243 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-9 chr6 31217743 31218066 + 0.756118839439549 NA intron (NR_110469, intron 1 of 3) CpG 570 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-11 chr4 55142208 55142537 + 0.756118839439549 NA Intergenic Intergenic 194427 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-10 chr7 19094445 19094998 + 0.756118839439549 NA TTS (NM_001190491) TTS (NM_001190491) 177 NM_011383 20475 Mm.3410 NM_011383 ENSMUSG00000040841 Six5 Dmahp|MDMAHP|TrexBF sine oculis-related homeobox 5 protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549-4 chr12 104912287 104912662 + 0.756118839439549 NA Intergenic Intergenic -47398 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_17_24_-0.745089961528775_4.27131120901034_0.756118839439549 chr4 149890376 149890622 + 0.756118839439549 NA Intergenic Intergenic 64507 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak2_17_24_-0.745089961528775_4.27131120901034_0.756118839439549 chr10 79945246 79945675 + 0.756118839439549 NA intron (NM_001288625, intron 3 of 8) intron (NM_001288625, intron 3 of 8) -14692 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding common_peak2_56_34_0.420716039827635_5.33964103685878_0.756055617691209 chr12 71831208 71831618 + 0.756055617691209 NA intron (NM_026102, intron 1 of 25) CpG 345 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak1_56_34_0.420716039827635_5.33964103685878_0.756055617691209 chr17 35120635 35121196 + 0.756055617691209 NA promoter-TSS (NM_001128597) promoter-TSS (NM_001128597) 377 NM_001303476 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_56_34_0.420716039827635_5.33964103685878_0.756055617691209-4 chr2 140169898 140170602 + 0.756055617691209 NA promoter-TSS (NM_027093) promoter-TSS (NM_027093) 308 NM_001081090 66580 Mm.21228 NM_001081090 ENSMUSG00000045624 Esf1 2610101J03Rik|ABTAP|AW545818|C79684 ESF1 nucleolar pre-rRNA processing protein homolog protein-coding common_peak1_56_34_0.420716039827635_5.33964103685878_0.756055617691209-2 chr17 70990595 70991268 + 0.756055617691209 NA promoter-TSS (NM_023402) promoter-TSS (NM_023402) -415 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_56_34_0.420716039827635_5.33964103685878_0.756055617691209-2 chr7 141392383 141392949 + 0.756055617691209 NA intron (NM_011528, intron 1 of 7) intron (NM_011528, intron 1 of 7) 506 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding common_peak1_56_34_0.420716039827635_5.33964103685878_0.756055617691209-3 chr18 35191547 35192117 + 0.756055617691209 NA intron (NM_009818, intron 7 of 17) intron (NM_009818, intron 7 of 17) 23192 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak1_40_47_-0.506947953547474_5.33148852394742_0.756055617691202-2 chr17 3326591 3327290 + 0.756055617691202 NA intron (NM_001122998, intron 1 of 26) CpG 367 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_40_47_-0.506947953547474_5.33148852394742_0.756055617691202-4 chrX 101429822 101430610 + 0.756055617691202 NA intron (NM_001252518, intron 1 of 11) intron (NM_001252518, intron 1 of 11) 565 NM_001252518 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak2_40_47_-0.506947953547474_5.33148852394742_0.756055617691202-3 chr7 143738510 143739566 + 0.756055617691202 NA intron (NM_024289, intron 1 of 21) intron (NM_024289, intron 1 of 21) 1322 NM_001199227 79196 Mm.21199 NM_024289 ENSMUSG00000037606 Osbpl5 1110006M06Rik|AI462538|ORP5|Obph1|Osbp2 oxysterol binding protein-like 5 protein-coding common_peak2_40_47_-0.506947953547474_5.33148852394742_0.756055617691202 chr16 20611194 20612074 + 0.756055617691202 NA promoter-TSS (NM_177940) promoter-TSS (NM_177940) 33 NM_025462 110599566 Mm.263319 NM_025462 Eef1akmt4 - eukaryotic translation elongation factor 1 alpha lysine specific methyltransferase 4 protein-coding common_peak2_40_47_-0.506947953547474_5.33148852394742_0.756055617691202-2 chr5 135743721 135744318 + 0.756055617691202 NA intron (NM_172541, intron 1 of 11) CpG 153 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding common_peak1_40_47_-0.506947953547474_5.33148852394742_0.756055617691202 chr10 77605711 77606432 + 0.756055617691202 NA promoter-TSS (NR_125904) promoter-TSS (NR_125904) -26 NM_001301672 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding common_peak2_48_54_-0.448001570158605_5.55735892844536_0.755494033265326-4 chr17 35089152 35089686 + 0.755494033265326 NA exon (NM_178592, exon 1 of 20) exon (NM_178592, exon 1 of 20) 128 NM_178592 193742 Mm.43745 NM_178592 ENSMUSG00000007036 Abhd16a AI326074|Bat-5|Bat5|D17H6S82E|NG26 abhydrolase domain containing 16A protein-coding common_peak1_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-2 chr3 41182637 41183336 + 0.755494033265326 NA Intergenic Intergenic -99940 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-2 chr3 27696305 27696945 + 0.755494033265326 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 13827 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-3 chr3 87980650 87981711 + 0.755494033265326 NA TTS (NM_016701) TTS (NM_016701) 10087 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding unique_peak1_65_40_0.402459000206431_5.5587815047213_0.755494033265326 chr3 104220738 104222081 + 0.755494033265326 NA Intergenic Intergenic -1003 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak2_48_54_-0.448001570158605_5.55735892844536_0.755494033265326 chr1 155075226 155075953 + 0.755494033265326 NA intron (NR_151545, intron 3 of 6) (TG)n|Simple_repeat|Simple_repeat 7675 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_48_54_-0.448001570158605_5.55735892844536_0.755494033265326-5 chr9 64050335 64051042 + 0.755494033265326 NA intron (NR_040713, intron 1 of 2) intron (NR_040713, intron 1 of 2) 859 NR_040713 68697 Mm.491042 NR_040713 ENSMUSG00000097036 1110036E04Rik - RIKEN cDNA 1110036E04 gene ncRNA common_peak1_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-4 chr8 26362831 26363263 + 0.755494033265326 NA Intergenic Intergenic 204878 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak2_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-4 chr8 45001017 45001589 + 0.755494033265326 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 51095 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_48_54_-0.448001570158605_5.55735892844536_0.755494033265326 chr16 32672683 32673285 + 0.755494033265326 NA promoter-TSS (NM_001347185) promoter-TSS (NM_001347185) -170 NM_001347185 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-3 chr7 144915165 144915702 + 0.755494033265326 NA intron (NM_001361263, intron 1 of 4) CpG 333 NM_001347537 72284 Mm.273049 NM_028184 ENSMUSG00000031072 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 protein-coding common_peak1_47_54_-0.477539046652654_5.54259019019833_0.755494033265326 chr3 27696320 27696946 + 0.755494033265326 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 13819 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_65_40_0.402459000206431_5.5587815047213_0.755494033265326 chr2 155810099 155811367 + 0.755494033265326 NA intron (NM_010808, intron 6 of 8) MIRb|SINE|MIR 8470 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-5 chr8 111876156 111876716 + 0.755494033265326 NA intron (NM_025781, intron 1 of 2) CpG 239 NM_025781 66817 Mm.345350 NM_025781 ENSMUSG00000031953 Tmem170 9030409E16Rik|AA403674|D8Bwg1414e|Tmem170a transmembrane protein 170 protein-coding common_peak2_48_54_-0.448001570158605_5.55735892844536_0.755494033265326-2 chr11 43682079 43682667 + 0.755494033265326 NA exon (NM_001164231, exon 1 of 4) exon (NM_001164231, exon 1 of 4) 375 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding common_peak2_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-6 chr9 75441435 75442055 + 0.755494033265326 NA intron (NM_001039522, intron 1 of 11) CpG 221 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak1_47_54_-0.477539046652654_5.54259019019833_0.755494033265326-5 chr8 120226712 120227442 + 0.755494033265326 NA intron (NR_110496, intron 1 of 2) intron (NR_110496, intron 1 of 2) 1153 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_47_54_-0.477539046652654_5.54259019019833_0.755494033265326 chr13 40859966 40860890 + 0.755494033265326 NA exon (NM_023887, exon 1 of 3) exon (NM_023887, exon 1 of 3) 660 NM_023887 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak2_48_54_-0.448001570158605_5.55735892844536_0.755494033265326-3 chr16 4596365 4597439 + 0.755494033265326 NA intron (NM_031184, intron 1 of 6) MIR3|SINE|MIR 2189 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_93_96_-0.333306518458317_6.43325958295797_0.755067614330788-3 chr7 28381279 28382147 + 0.755067614330788 NA Intergenic Intergenic -2485 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_116_77_0.294752180474529_6.43277830909951_0.755067614330788-2 chr17 28339969 28341178 + 0.755067614330788 NA intron (NM_001098226, intron 2 of 12) intron (NM_001098226, intron 2 of 12) 9773 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak2_116_77_0.294752180474529_6.43277830909951_0.755067614330788 chr15 61987572 61988356 + 0.755067614330788 NA exon (NM_010849, exon 2 of 3) exon (NM_010849, exon 2 of 3) 2623 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_93_96_-0.333306518458317_6.43325958295797_0.755067614330788 chr4 32656611 32657677 + 0.755067614330788 NA promoter-TSS (NM_001081392) promoter-TSS (NM_001081392) 25 NM_001081392 100019 Mm.24627 NM_133874 ENSMUSG00000058006 Mdn1 4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135 midasin AAA ATPase 1 protein-coding common_peak1_117_77_0.306943886887186_6.43887416230584_0.755067614330788 chr6 91200386 91202034 + 0.755067614330788 NA Intergenic MIRc|SINE|MIR -11554 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_93_96_-0.333306518458317_6.43325958295797_0.755067614330788 chr16 55815961 55816987 + 0.755067614330788 NA intron (NM_001159395, intron 7 of 12) intron (NM_001159395, intron 7 of 12) 5664 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_93_96_-0.333306518458317_6.43325958295797_0.755067614330788-2 chr18 84589438 84590208 + 0.755067614330788 NA promoter-TSS (NM_001033341) promoter-TSS (NM_001033341) -319 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak1_116_77_0.294752180474529_6.43277830909951_0.755067614330788 chr11 4261275 4262079 + 0.755067614330788 NA intron (NM_008501, intron 1 of 3) intron (NM_008501, intron 1 of 3) 4109 NM_008501 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_116_77_0.294752180474529_6.43277830909951_0.755067614330788-2 chr7 16308374 16309963 + 0.755067614330788 NA promoter-TSS (NM_133234) promoter-TSS (NM_133234) -415 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_153_150_-0.264625266727133_7.10609210596151_0.754779692087869 chr15 57694651 57696588 + 0.754779692087869 NA intron (NM_199449, intron 1 of 3) CpG 952 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak2_127_127_-0.291124894501936_6.85443755274903_0.754725458768929 chr4 130663377 130664656 + 0.754725458768929 NA intron (NM_001356566, intron 1 of 17) intron (NM_001356566, intron 1 of 17) 659 NM_001356564 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding common_peak1_155_105_0.264343362972881_6.86009213604964_0.754725458768905 chr14 54222794 54224286 + 0.754725458768905 NA Intergenic Intergenic 30389 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_155_105_0.264343362972881_6.86009213604964_0.754725458768905-2 chr6 146110239 146112657 + 0.754725458768905 NA 3' UTR (NM_010586, exon 56 of 56) 3' UTR (NM_010586, exon 56 of 56) 177326 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak2_155_105_0.264343362972881_6.86009213604964_0.754725458768905 chr3 136670183 136671906 + 0.754725458768905 NA intron (NM_008913, intron 1 of 13) CpG 978 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak2_214_149_0.222970779320942_7.34030408015635_0.754577797381949 chr11 120348682 120350054 + 0.754577797381949 NA promoter-TSS (NM_001313923) promoter-TSS (NM_001313923) 690 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak2_129_86_0.288141618213776_6.58701430495562_0.754241777079252 chr8 70673325 70674029 + 0.754241777079252 NA intron (NM_015816, intron 1 of 4) CpG 446 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_73_78_-0.379874986692905_6.11384325483065_0.753641103152394-3 chr4 59189117 59190314 + 0.753641103152394 NA exon (NM_011673, exon 1 of 9) exon (NM_011673, exon 1 of 9) 165 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_73_78_-0.379874986692905_6.11384325483065_0.753641103152394 chr5 4103948 4104771 + 0.753641103152394 NA 5' UTR (NM_020010, exon 1 of 10) 5' UTR (NM_020010, exon 1 of 10) 338 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding common_peak1_73_78_-0.379874986692905_6.11384325483065_0.753641103152394-2 chr10 19081158 19082094 + 0.753641103152394 NA Intergenic Intergenic -60123 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_73_78_-0.379874986692905_6.11384325483065_0.753641103152394 chr1 37996325 37997190 + 0.753641103152394 NA intron (NM_172054, intron 1 of 4) intron (NM_172054, intron 1 of 4) 451 NM_172054 98258 Mm.28438 NM_172054 ENSMUSG00000058407 Txndc9 AI098020|APACD thioredoxin domain containing 9 protein-coding common_peak2_83_87_-0.353951902191161_6.28245566754172_0.753034214639445-2 chr8 47533653 47534400 + 0.753034214639445 NA promoter-TSS (NM_177240) promoter-TSS (NM_177240) 381 NM_203507 192174 Mm.273081 NM_203507 ENSMUSG00000031568 Rwdd4a BC016198|Gm1942|Rwdd4 RWD domain containing 4A protein-coding common_peak2_83_87_-0.353951902191161_6.28245566754172_0.753034214639445 chr19 32485385 32486459 + 0.753034214639445 NA 5' UTR (NM_010799, exon 1 of 5) 5' UTR (NM_010799, exon 1 of 5) 153 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding common_peak1_83_87_-0.353951902191161_6.28245566754172_0.753034214639445 chr6 147195698 147197015 + 0.753034214639445 NA intron (NR_033640, intron 2 of 2) intron (NR_033640, intron 2 of 2) 16115 NR_033640 100039641 Mm.170402 NR_033640 ENSMUSG00000085600 E330012B07Rik Gm15768 RIKEN cDNA E330012B07 gene ncRNA common_peak1_199_138_0.229247830282312_7.23356498786466_0.752436957991269 chr9 102724106 102726200 + 0.752436957991269 NA exon (NM_019764, exon 5 of 10) exon (NM_019764, exon 5 of 10) 7349 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_214_203_-0.220635872154673_7.56210740589416_0.751822234661368 chr19 28011232 28012373 + 0.751822234661368 NA promoter-TSS (NM_011265) promoter-TSS (NM_011265) -636 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_248_175_0.202672624907831_7.56076793109121_0.751822234661368 chr2 167776357 167778836 + 0.751822234661368 NA Intergenic CpG 86419 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_154_151_-0.264876054710169_7.1154894860885_0.751507127700629 chr15 76455693 76456934 + 0.751507127700629 NA intron (NM_013481, intron 3 of 15) intron (NM_013481, intron 3 of 15) -1125 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak1_184_127_0.236507680664832_7.11825384033242_0.751507127700629 chr7 144054211 144055772 + 0.751507127700629 NA Intergenic Intergenic 45737 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_184_127_0.236507680664832_7.11825384033242_0.751507127700629 chr11 75402499 75403765 + 0.751507127700629 NA exon (NM_001102611, exon 9 of 11) exon (NM_001102611, exon 9 of 11) 19491 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak2_117_117_-0.290296943612407_6.73749457755564_0.751347735740338 chr4 126202189 126203428 + 0.751347735740338 NA promoter-TSS (NM_146153) promoter-TSS (NM_146153) -98 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_116_117_-0.302488650025063_6.73139872434931_0.751347735740338 chr8 122224860 122225584 + 0.751347735740338 NA Intergenic Intergenic -56919 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_129_128_-0.28014214136075_6.87115618474288_0.750836180054878 chr11 57644931 57646163 + 0.750836180054878 NA 5' UTR (NM_134189, exon 1 of 12) 5' UTR (NM_134189, exon 1 of 12) 105 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak1_156_106_0.25995032462326_6.87144214871278_0.750836180054853 chr15 73183876 73184847 + 0.750836180054853 NA intron (NM_153178, intron 1 of 18) CpG 586 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_74_47_0.358171963658607_5.76404848255046_0.75069531938043-2 chrX 41911241 41912167 + 0.75069531938043 NA intron (NM_001033422, intron 1 of 38) CpG 197 NM_001033422 331401 Mm.259498 NM_001033422 ENSMUSG00000037475 Thoc2 6330441O12Rik|D130005M13Rik|Gm1139|Gm1793|Tho2 THO complex 2 protein-coding common_peak1_75_47_0.377145974250746_5.77353548784653_0.75069531938043-2 chr11 118354897 118355850 + 0.75069531938043 NA promoter-TSS (NM_011594) promoter-TSS (NM_011594) 38 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak2_56_62_-0.427280866727315_5.76363949013626_0.75069531938043-2 chr18 75365609 75366573 + 0.75069531938043 NA intron (NR_155535, intron 1 of 6) intron (NR_155535, intron 1 of 6) 997 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_75_47_0.377145974250746_5.77353548784653_0.75069531938043 chr11 76587712 76588449 + 0.75069531938043 NA Intergenic Intergenic -10341 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_56_62_-0.427280866727315_5.76363949013626_0.75069531938043-3 chr4 32304219 32305318 + 0.75069531938043 NA Intergenic Intergenic -112667 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_74_47_0.358171963658607_5.76404848255046_0.75069531938043 chr3 57470806 57471557 + 0.75069531938043 NA intron (NM_133784, intron 4 of 6) intron (NM_133784, intron 4 of 6) 45771 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding common_peak2_56_62_-0.427280866727315_5.76363949013626_0.75069531938043 chr16 8667556 8668297 + 0.75069531938043 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 4227 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_75_47_0.377145974250746_5.77353548784653_0.75069531938043 chr17 27038845 27039487 + 0.75069531938043 NA Intergenic Intergenic 9907 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak1_74_47_0.358171963658607_5.76404848255046_0.75069531938043 chr16 5050148 5050709 + 0.75069531938043 NA promoter-TSS (NM_001079814) promoter-TSS (NM_001079814) 371 NM_001356320 170644 Mm.66356 NM_026666 ENSMUSG00000039473 Ubn1 1110029L11Rik|2610108L02Rik|AA673476|AW124741 ubinuclein 1 protein-coding common_peak2_56_62_-0.427280866727315_5.76363949013626_0.75069531938043-4 chr4 150706740 150707236 + 0.75069531938043 NA Intergenic Intergenic -54814 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_84_54_0.341073062992426_5.95189624502087_0.75058632931876 chr13 36533639 36534836 + 0.75058632931876 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 200240 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_85_54_0.357827837111529_5.96027363208042_0.75058632931876-2 chr2 163017187 163018073 + 0.75058632931876 NA 5' UTR (NM_001356522, exon 1 of 13) 5' UTR (NM_001356522, exon 1 of 13) 277 NM_001356522 245866 Mm.34034 NM_172150 ENSMUSG00000017858 Ift52 BC037708|NGD5 intraflagellar transport 52 protein-coding common_peak1_85_54_0.357827837111529_5.96027363208042_0.75058632931876-3 chr7 110060909 110061383 + 0.75058632931876 NA promoter-TSS (NM_009281) promoter-TSS (NM_009281) -556 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak1_84_54_0.341073062992426_5.95189624502087_0.75058632931876-2 chr8 68190987 68191744 + 0.75058632931876 NA Intergenic Intergenic -85163 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak1_85_54_0.357827837111529_5.96027363208042_0.75058632931876 chr2 52958482 52959820 + 0.75058632931876 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 101283 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak1_65_70_-0.389736114680168_5.9548790621646_0.75058632931876-2 chr14 7873023 7873636 + 0.75058632931876 NA intron (NM_001081427, intron 3 of 45) intron (NM_001081427, intron 3 of 45) 55372 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_65_70_-0.389736114680168_5.9548790621646_0.75058632931876 chr1 90224900 90225706 + 0.75058632931876 NA Intergenic LTR33A_|LTR|ERVL 21323 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding common_peak1_49_29_0.45540826654379_5.13459472888041_0.749946955723563-2 chr11 4848793 4849355 + 0.749946955723563 NA 5' UTR (NM_001361676, exon 1 of 16) 5' UTR (NM_001361676, exon 1 of 16) 470 NM_001252250 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding common_peak2_49_29_0.45540826654379_5.13459472888041_0.749946955723563 chr1 16617418 16618109 + 0.749946955723563 NA intron (NM_001271016, intron 1 of 6) intron (NM_001271016, intron 1 of 6) 1575 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-3 chr11 85139100 85139904 + 0.749946955723563 NA intron (NM_001029934, intron 1 of 33) CpG 453 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-5 chr15 83445396 83445908 + 0.749946955723563 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 2228 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_34_41_-0.540961430232957_5.12183670766228_0.749946955723563 chr10 17583735 17584556 + 0.749946955723563 NA Intergenic Intergenic -139083 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_49_29_0.45540826654379_5.13459472888041_0.749946955723563 chr5 122899485 122900301 + 0.749946955723563 NA intron (NM_001003953, intron 12 of 22) CpG 457 NM_013910 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-9 chr9 102775745 102776243 + 0.749946955723563 NA Intergenic Intergenic 36346 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-2 chr1 191317728 191318212 + 0.749946955723563 NA exon (NM_025424, exon 1 of 4) exon (NM_025424, exon 1 of 4) 148 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak2_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-2 chr14 7848081 7848500 + 0.749946955723563 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 30333 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_49_29_0.45540826654379_5.13459472888041_0.749946955723563-4 chr6 90358931 90359512 + 0.749946955723563 NA intron (NM_144940, intron 18 of 19) intron (NM_144940, intron 18 of 19) -10273 NM_173002 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak2_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-3 chr15 66805748 66806329 + 0.749946955723563 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 25791 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-7 chr6 84010969 84011446 + 0.749946955723563 NA intron (NM_001077694, intron 1 of 54) B1_Mur4|SINE|Alu 2609 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak1_49_29_0.45540826654379_5.13459472888041_0.749946955723563-3 chr2 165854857 165855564 + 0.749946955723563 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 2963 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-6 chr5 135957910 135958269 + 0.749946955723563 NA Intergenic (T)n|Simple_repeat|Simple_repeat 16387 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_49_29_0.45540826654379_5.13459472888041_0.749946955723563 chr10 128981580 128982395 + 0.749946955723563 NA Intergenic Intergenic -7927 NM_146861 18373 Mm.377111 NM_146861 ENSMUSG00000069430 Olfr9 MOR269-3 olfactory receptor 9 protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563 chr1 170188824 170189306 + 0.749946955723563 NA Intergenic Intergenic -14101 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_49_29_0.45540826654379_5.13459472888041_0.749946955723563-5 chr9 70249212 70250114 + 0.749946955723563 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 42313 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-4 chr12 57230486 57230935 + 0.749946955723563 NA intron (NM_001164370, intron 1 of 9) CpG 285 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding common_peak1_34_41_-0.540961430232957_5.12183670766228_0.749946955723563-8 chr8 25993720 25994096 + 0.749946955723563 NA intron (NM_029037, intron 1 of 4) intron (NM_029037, intron 1 of 4) 213 NM_029037 74653 Mm.17631 NM_029037 ENSMUSG00000037251 Pomk 4930444A02Rik|Sgk196 protein-O-mannose kinase protein-coding common_peak2_49_29_0.45540826654379_5.13459472888041_0.749946955723563-2 chr10 127290950 127291508 + 0.749946955723563 NA intron (NM_001290183, intron 1 of 2) intron (NM_001290183, intron 1 of 2) 436 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak2_199_190_-0.229239925029929_7.46280886552078_0.749911162030604 chr7 89631664 89634232 + 0.749911162030604 NA exon (NM_181407, exon 1 of 14) exon (NM_181407, exon 1 of 14) 130 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_233_163_0.215547415145451_7.46532571219081_0.749911162030505 chr19 47313819 47315745 + 0.749911162030505 NA intron (NM_008018, intron 7 of 14) intron (NM_008018, intron 7 of 14) -41193 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA common_peak1_118_78_0.300654179160235_6.45410783775722_0.749857950442339-2 chr9 70241124 70242516 + 0.749857950442339 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 34470 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_94_97_-0.332944470389427_6.4482376089205_0.749857950442339 chr10 79927042 79927934 + 0.749857950442339 NA intron (NM_001288625, intron 1 of 8) CpG 147 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak2_94_97_-0.332944470389427_6.4482376089205_0.749857950442339-2 chr7 80802194 80803245 + 0.749857950442339 NA intron (NM_016721, intron 1 of 37) intron (NM_016721, intron 1 of 37) 612 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_118_78_0.300654179160235_6.45410783775722_0.749857950442339 chr8 105551908 105552914 + 0.749857950442339 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 13653 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_249_233_-0.202518917823706_7.76910526067155_0.74962407950077 chr15 58932617 58934410 + 0.74962407950077 NA promoter-TSS (NM_023172) promoter-TSS (NM_023172) 217 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak1_130_87_0.282630689805093_6.60074696353984_0.749552738149672 chr3 8992271 8993362 + 0.749552738149672 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 11388 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak2_105_107_-0.316172426466852_6.59680128893004_0.749552738149647 chr2 117904154 117905885 + 0.749552738149647 NA intron (NR_040631, intron 5 of 5) intron (NR_040631, intron 5 of 5) 83091 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_200_139_0.226050623349632_7.24230832861978_0.749450560793578 chr4 136469605 136471446 + 0.749450560793578 NA intron (NM_024452, intron 1 of 4) CpG 764 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-3 chr13 3539070 3539767 + 0.748982406290548 NA intron (NM_008112, intron 1 of 10) intron (NM_008112, intron 1 of 10) 1343 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak2_41_24_0.468678506244656_4.87819544289705_0.748982406290548-2 chr11 69884216 69884673 + 0.748982406290548 NA exon (NM_153788, exon 17 of 22) exon (NM_153788, exon 17 of 22) -2350 NR_105889 102466208 NR_105889 ENSMUSG00000104996 Mir6924 mmu-mir-6924 microRNA 6924 ncRNA common_peak2_41_24_0.468678506244656_4.87819544289705_0.748982406290548-4 chr11 75464501 75465064 + 0.748982406290548 NA TTS (NR_029739) TTS (NR_029739) 1066 NR_029739 387141 NR_029739 ENSMUSG00000065529 Mir22 Mirn22|mmu-mir-22 microRNA 22 ncRNA common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-8 chr19 32254744 32255383 + 0.748982406290548 NA intron (NM_144792, intron 3 of 9) intron (NM_144792, intron 3 of 9) -44050 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_41_24_0.468678506244656_4.87819544289705_0.748982406290548 chr1 170163877 170164551 + 0.748982406290548 NA intron (NM_133806, intron 2 of 10) intron (NM_133806, intron 2 of 10) 10750 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-5 chr15 59386545 59386931 + 0.748982406290548 NA intron (NM_001164604, intron 2 of 4) intron (NM_001164604, intron 2 of 4) 12540 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak1_42_24_0.502386340434708_4.89504935999208_0.748982406290548 chr17 80788476 80789016 + 0.748982406290548 NA Intergenic Intergenic -60721 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_42_24_0.502386340434708_4.89504935999208_0.748982406290548-4 chr9 57130804 57131202 + 0.748982406290548 NA non-coding (NR_102289, exon 1 of 2) non-coding (NR_102289, exon 1 of 2) 226 NM_028636 73744 Mm.30110 NM_028636 ENSMUSG00000032295 Man2c1 1110025H24Rik mannosidase, alpha, class 2C, member 1 protein-coding common_peak2_41_24_0.468678506244656_4.87819544289705_0.748982406290548-6 chr9 35199687 35200368 + 0.748982406290548 NA promoter-TSS (NM_001177847) promoter-TSS (NM_001177847) -62 NM_054096 117149 Mm.23987 NM_054096 ENSMUSG00000032041 Tirap AA407980|C130027E04Rik|Mal|Tlr4ap|Wyatt toll-interleukin 1 receptor (TIR) domain-containing adaptor protein protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-6 chr15 80083561 80084007 + 0.748982406290548 NA promoter-TSS (NM_013762) promoter-TSS (NM_013762) -378 NM_013762 27367 Mm.290771 NM_013762 ENSMUSG00000060036 Rpl3 F2|J1 ribosomal protein L3 protein-coding common_peak2_41_24_0.468678506244656_4.87819544289705_0.748982406290548-3 chr11 74521941 74522392 + 0.748982406290548 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 67992 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-2 chr9 107325640 107326454 + 0.748982406290548 NA Intergenic Intergenic 12303 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak2_41_24_0.468678506244656_4.87819544289705_0.748982406290548-5 chr2 165189985 165190334 + 0.748982406290548 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 44578 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_42_24_0.502386340434708_4.89504935999208_0.748982406290548-2 chr12 111907303 111907692 + 0.748982406290548 NA intron (NM_011625, intron 1 of 16) intron (NM_011625, intron 1 of 16) 558 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak1_42_24_0.502386340434708_4.89504935999208_0.748982406290548-2 chr16 23319724 23320037 + 0.748982406290548 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 29410 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548 chr15 59796695 59797398 + 0.748982406290548 NA Intergenic Intergenic -2087 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-7 chr19 3907213 3907622 + 0.748982406290548 NA promoter-TSS (NM_001167784) promoter-TSS (NM_001167784) -284 NM_001136091 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak2_42_24_0.502386340434708_4.89504935999208_0.748982406290548 chr1 64796130 64796457 + 0.748982406290548 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -58543 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-4 chr13 45390037 45390506 + 0.748982406290548 NA intron (NM_153789, intron 1 of 6) CpG 529 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_42_24_0.502386340434708_4.89504935999208_0.748982406290548 chr10 94116580 94116919 + 0.748982406290548 NA intron (NM_053072, intron 8 of 20) intron (NM_053072, intron 8 of 20) -31182 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding common_peak1_42_24_0.502386340434708_4.89504935999208_0.748982406290548-3 chr2 13407663 13407982 + 0.748982406290548 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 84054 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_42_24_0.502386340434708_4.89504935999208_0.748982406290548-5 chr9 123851605 123851896 + 0.748982406290548 NA promoter-TSS (NM_148925) promoter-TSS (NM_148925) -89 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-10 chr4 138434722 138435237 + 0.748982406290548 NA intron (NM_026689, intron 1 of 3) CpG 307 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-9 chr3 100161986 100162374 + 0.748982406290548 NA promoter-TSS (NM_010269) promoter-TSS (NM_010269) 227 NM_175552 269470 Mm.24591 NM_175552 ENSMUSG00000033285 Wdr3 AW546279|D030020G18Rik WD repeat domain 3 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548 chr11 8539509 8539995 + 0.748982406290548 NA intron (NM_001083587, intron 9 of 30) intron (NM_001083587, intron 9 of 30) 124783 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-11 chr6 124711605 124712077 + 0.748982406290548 NA promoter-TSS (NM_007531) promoter-TSS (NM_007531) 337 NM_013536 14791 Mm.6390 NM_013536 ENSMUSG00000004268 Emg1 C2f|Grcc2f EMG1 N1-specific pseudouridine methyltransferase protein-coding common_peak2_42_24_0.502386340434708_4.89504935999208_0.748982406290548-3 chr17 14992353 14992746 + 0.748982406290548 NA TTS (NM_001123370) TTS (NM_001123370) 13685 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding common_peak1_41_24_0.468678506244656_4.87819544289705_0.748982406290548-2 chr11 100521505 100522159 + 0.748982406290548 NA intron (NM_134037, intron 3 of 27) intron (NM_134037, intron 3 of 27) 6168 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding common_peak1_42_24_0.502386340434708_4.89504935999208_0.748982406290548-4 chr2 71644404 71644965 + 0.748982406290548 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -74733 NR_037979 381371 Mm.330284 NM_201366 ENSMUSG00000064263 Platr26 Gm1631 pluripotency associated transcript 26 ncRNA common_peak1_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-4 chr8 125343491 125343840 + 0.748982406290541 NA Intergenic Intergenic 149168 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-7 chr7 25246312 25246818 + 0.748982406290541 NA intron (NM_010155, intron 1 of 3) intron (NM_010155, intron 1 of 3) 4193 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-8 chr8 120228798 120229374 + 0.748982406290541 NA promoter-TSS (NR_110496) promoter-TSS (NR_110496) -856 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-5 chr2 83710498 83710924 + 0.748982406290541 NA Intergenic Intergenic -13686 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-9 chr9 58109734 58110363 + 0.748982406290541 NA intron (NM_001166282, intron 3 of 19) intron (NM_001166282, intron 3 of 19) -7751 NM_001311085 382077 Mm.335193 NM_029212 ENSMUSG00000037716 Ccdc33 4930535E21Rik|Gm1117|Tzip1 coiled-coil domain containing 33 protein-coding common_peak1_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-2 chr16 45158929 45159448 + 0.748982406290541 NA promoter-TSS (NM_001356453) promoter-TSS (NM_001356453) 359 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding common_peak1_28_35_-0.587957000491802_4.87594650119641_0.748982406290541 chr13 32555933 32556291 + 0.748982406290541 NA Intergenic Intergenic -217568 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-6 chr4 143212180 143212481 + 0.748982406290541 NA intron (NM_001256380, intron 1 of 7) CpG 379 NM_001081355 110593 Mm.332020 NM_001081355 ENSMUSG00000057637 Prdm2 4833427P12Rik|E330024L24Rik|Gm1033|Gm19732|KMT8|Riz|Riz1|Znfpr1c1 PR domain containing 2, with ZNF domain protein-coding unique_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541 chr11 8461179 8461796 + 0.748982406290541 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 203048 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-3 chr11 120237452 120237965 + 0.748982406290541 NA intron (NM_198423, intron 2 of 27) CpG-2934 4761 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-4 chr13 97579870 97580472 + 0.748982406290541 NA intron (NR_046157, intron 2 of 2) intron (NR_046157, intron 2 of 2) 20171 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak1_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-3 chr4 150913834 150914442 + 0.748982406290541 NA Intergenic PB1D9|SINE|Alu -4217 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541 chr1 131126380 131126710 + 0.748982406290541 NA Intergenic Intergenic 11689 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak2_28_35_-0.587957000491802_4.87594650119641_0.748982406290541-2 chr10 121961024 121961532 + 0.748982406290541 NA intron (NM_001081037, intron 1 of 21) intron (NM_001081037, intron 1 of 21) 86037 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding common_peak1_107_70_0.315744751822232_6.3076194954158_0.747287521987093 chr19 6920417 6921781 + 0.747287521987093 NA intron (NM_007953, intron 1 of 6) intron (NM_007953, intron 1 of 6) 709 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding common_peak1_106_70_0.302418917524476_6.30095657826692_0.747287521987093 chr15 95791012 95791799 + 0.747287521987093 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 562 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak1_85_88_-0.336545880330209_6.30746049080129_0.747287521987093-2 chr19 8929377 8930366 + 0.747287521987093 NA promoter-TSS (NM_009073) promoter-TSS (NM_009073) 177 NM_144872 225898 Mm.31008 NM_144872 ENSMUSG00000071647 Eml3 BC022146 echinoderm microtubule associated protein like 3 protein-coding common_peak1_85_88_-0.336545880330209_6.30746049080129_0.747287521987093 chr1 155088376 155089712 + 0.747287521987093 NA Intergenic Intergenic -5780 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_75_79_-0.35981961991546_6.14201828492963_0.74718946071338-3 chr9 119321675 119322772 + 0.74718946071338 NA non-coding (NR_045693, exon 1 of 19) non-coding (NR_045693, exon 1 of 19) 204 NR_045693 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding common_peak2_75_79_-0.35981961991546_6.14201828492963_0.74718946071338 chr16 49970788 49971778 + 0.74718946071338 NA Intergenic Intergenic -9177 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak1_74_79_-0.3787936305076_6.13253127963356_0.74718946071338 chr9 72662500 72663365 + 0.74718946071338 NA intron (NM_010890, intron 1 of 28) CpG 601 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_75_79_-0.35981961991546_6.14201828492963_0.74718946071338-2 chr17 80479408 80480892 + 0.74718946071338 NA 5' UTR (NM_009231, exon 1 of 22) 5' UTR (NM_009231, exon 1 of 22) 303 NM_009231 20662 Mm.60975 NM_009231 ENSMUSG00000024241 Sos1 4430401P03Rik|9630010N06|AI449023 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding common_peak1_96_62_0.334330630911161_6.1444452389555_0.747189460713368 chr16 94312635 94313574 + 0.747189460713368 NA intron (NM_139145, intron 1 of 10) intron (NM_139145, intron 1 of 10) 459 NM_139145 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak1_95_62_0.319485763798846_6.13702280539934_0.747189460713368 chr8 122180199 122181482 + 0.747189460713368 NA Intergenic Intergenic -101301 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_95_62_0.319485763798846_6.13702280539934_0.747189460713368 chr4 151933708 151934400 + 0.747189460713368 NA intron (NM_172704, intron 1 of 15) CpG 334 NM_172704 230935 Mm.21353 NM_172704 ENSMUSG00000039768 Dnajc11 E030019A03Rik DnaJ heat shock protein family (Hsp40) member C11 protein-coding common_peak1_143_97_0.262891445411008_6.74615556682071_0.747145267513446 chr13 119790151 119791671 + 0.747145267513446 NA promoter-TSS (NM_028245) promoter-TSS (NM_028245) -105 NM_001302549 72465 Mm.139115 NM_028245 ENSMUSG00000094870 Zfp131 2610109I01Rik|AW558871|Znf131 zinc finger protein 131 protein-coding common_peak2_432_390_-0.156330705947667_8.53285944433352_0.74695928983109 chr9 41581291 41586000 + 0.74695928983109 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 1719 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak1_201_140_0.222891567285375_7.25099713604148_0.746503462656361 chr19 59942683 59943954 + 0.746503462656361 NA promoter-TSS (NM_001033172) promoter-TSS (NM_001033172) 46 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_368_265_0.170293356980915_8.14042911399165_0.746374805802813 chr8 92845600 92847390 + 0.746374805802813 NA intron (NM_008610, intron 11 of 12) intron (NM_008610, intron 11 of 12) -8838 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak1_185_178_-0.239585615057265_7.36402296973562_0.746314183663448 chr2 119477107 119478282 + 0.746314183663448 NA promoter-TSS (NM_026574) promoter-TSS (NM_026574) -65 NM_026574 68142 Mm.330496 NM_026574 ENSMUSG00000034154 Ino80 2310079N15Rik|4632409L19Rik|Inoc1 INO80 complex subunit protein-coding common_peak2_66_41_0.389235594861627_5.58693522020957_0.745957255300192-2 chr19 53903434 53904067 + 0.745957255300192 NA intron (NM_001168491, intron 1 of 11) CpG 399 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_66_41_0.389235594861627_5.58693522020957_0.745957255300192 chr1 177258475 177259061 + 0.745957255300192 NA Intergenic CpG -10001 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak2_49_55_-0.445056059905295_5.58482689210496_0.745957255300192-2 chr14 33446212 33446975 + 0.745957255300192 NA intron (NM_001310453, intron 1 of 11) intron (NM_001310453, intron 1 of 11) 565 NM_001310453 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak1_66_41_0.389235594861627_5.58693522020957_0.745957255300192-2 chr8 25464730 25465474 + 0.745957255300192 NA Intergenic Intergenic -53657 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_66_41_0.389235594861627_5.58693522020957_0.745957255300192-3 chr7 63936922 63937563 + 0.745957255300192 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 1673 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_66_41_0.389235594861627_5.58693522020957_0.745957255300192 chr15 101368708 101369112 + 0.745957255300192 NA promoter-TSS (NR_035462) promoter-TSS (NR_035462) -442 NR_035462 100316694 NR_035462 ENSMUSG00000088459 Mir1941 mmu-mir-1941 microRNA 1941 ncRNA common_peak2_49_55_-0.445056059905295_5.58482689210496_0.745957255300192 chr11 88593554 88594752 + 0.745957255300192 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -25098 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_143_141_-0.272145829978466_7.01367420451545_0.745131722122369 chr11 77783666 77784823 + 0.745131722122369 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) 7009 NM_001291212 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_42_48_-0.468467313905776_5.38047618716232_0.744998914848106-4 chr4 152007772 152008596 + 0.744998914848106 NA promoter-TSS (NM_001033352) promoter-TSS (NM_001033352) -707 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106-2 chr10 95231906 95232607 + 0.744998914848106 NA intron (NM_001330138, intron 2 of 2) intron (NM_001330138, intron 2 of 2) -86431 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak2_42_48_-0.468467313905776_5.38047618716232_0.744998914848106-3 chr4 133605398 133605922 + 0.744998914848106 NA Intergenic Intergenic -3492 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106-6 chr4 101647774 101648291 + 0.744998914848106 NA intron (NM_175036, intron 1 of 3) CpG 249 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak1_42_48_-0.468467313905776_5.38047618716232_0.744998914848106 chr6 73248412 73248878 + 0.744998914848106 NA 5' UTR (NM_019879, exon 1 of 9) 5' UTR (NM_019879, exon 1 of 9) 140 NM_019879 56451 Mm.29845 NM_019879 ENSMUSG00000052738 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit protein-coding common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106-7 chr6 35330243 35330978 + 0.744998914848106 NA promoter-TSS (NR_040526) promoter-TSS (NR_040526) -236 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106 chr1 132332625 132333443 + 0.744998914848106 NA 3' UTR (NM_028778, exon 7 of 7) 3' UTR (NM_028778, exon 7 of 7) 16909 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106-3 chr14 14633438 14634144 + 0.744998914848106 NA Intergenic Intergenic -69234 NM_001360505 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106-4 chr17 84114564 84115445 + 0.744998914848106 NA Intergenic Intergenic 36344 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_42_48_-0.468467313905776_5.38047618716232_0.744998914848106-5 chr6 142275446 142275906 + 0.744998914848106 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) 3198 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak1_42_48_-0.468467313905776_5.38047618716232_0.744998914848106-2 chr6 122874567 122874917 + 0.744998914848106 NA intron (NM_026267, intron 1 of 7) CpG 185 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding common_peak2_41_48_-0.502175148095828_5.36362227006729_0.744998914848106-5 chr4 88805407 88805913 + 0.744998914848106 NA promoter-TSS (NM_001243155).3 promoter-TSS (NM_001243155).3 129 NM_001243167 668208 Mm.487241 NM_001243167 ENSMUSG00000070908 Gm13288 - predicted gene 13288 protein-coding common_peak2_42_48_-0.468467313905776_5.38047618716232_0.744998914848106-2 chr2 71529221 71530260 + 0.744998914848106 NA TTS (NR_002854) TTS (NR_002854) 295 NM_010053 13390 Mm.475101 NM_010053 ENSMUSG00000041911 Dlx1 Dlx|Dlx-1 distal-less homeobox 1 protein-coding common_peak2_42_48_-0.468467313905776_5.38047618716232_0.744998914848106 chr19 34198498 34199067 + 0.744998914848106 NA intron (NM_001360718, intron 1 of 10) intron (NM_001360718, intron 1 of 10) 5848 NM_001360718 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak2_57_35_0.404988019934954_5.37241901140979_0.7449989148481-3 chr11 61564959 61565511 + 0.7449989148481 NA intron (NM_001252189, intron 1 of 8) intron (NM_001252189, intron 1 of 8) 14452 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding unique_peak1_58_35_0.429476083880368_5.3846630433825_0.7449989148481 chr11 96314622 96315197 + 0.7449989148481 NA Intergenic CpG -2256 NR_029784 723893 NR_029784 ENSMUSG00000065519 Mir10a Mirn10a|miR-10a|mmu-mir-10a microRNA 10a ncRNA common_peak1_57_35_0.404988019934954_5.37241901140979_0.7449989148481-2 chr15 7597567 7598296 + 0.7449989148481 NA Intergenic Intergenic -199536 NM_001289498 268780 Mm.203208 NM_178748 ENSMUSG00000042961 Egflam 5930412K08|AU040377 EGF-like, fibronectin type III and laminin G domains protein-coding common_peak2_57_35_0.404988019934954_5.37241901140979_0.7449989148481 chr1 74035438 74036143 + 0.7449989148481 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 88657 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_58_35_0.429476083880368_5.3846630433825_0.7449989148481-3 chr7 80838127 80838758 + 0.7449989148481 NA Intergenic Intergenic -23666 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak1_57_35_0.404988019934954_5.37241901140979_0.7449989148481 chr7 127470204 127470944 + 0.7449989148481 NA Intergenic Intergenic -1040 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding common_peak2_58_35_0.429476083880368_5.3846630433825_0.7449989148481-2 chr19 32321560 32322387 + 0.7449989148481 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 27343 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_57_35_0.404988019934954_5.37241901140979_0.7449989148481-3 chr15 74988245 74988788 + 0.7449989148481 NA Intergenic Intergenic -5086 NM_020498 57248 Mm.358339 NM_020498 ENSMUSG00000022586 Ly6i AI789751|Ly-6I|Ly-6M lymphocyte antigen 6 complex, locus I protein-coding common_peak2_57_35_0.404988019934954_5.37241901140979_0.7449989148481-4 chr12 108308630 108309287 + 0.7449989148481 NA intron (NM_001044380, intron 1 of 8) intron (NM_001044380, intron 1 of 8) 2688 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak1_58_35_0.429476083880368_5.3846630433825_0.7449989148481 chr1 161969292 161969985 + 0.7449989148481 NA promoter-TSS (NM_001204905) promoter-TSS (NM_001204905) 450 NM_001039045 67292 Mm.45106 NM_026078 ENSMUSG00000026698 Pigc 3110030E07Rik|AW212108 phosphatidylinositol glycan anchor biosynthesis, class C protein-coding common_peak2_57_35_0.404988019934954_5.37241901140979_0.7449989148481-2 chr10 67672686 67673160 + 0.7449989148481 NA Intergenic Intergenic -100964 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_58_35_0.429476083880368_5.3846630433825_0.7449989148481 chr14 45463219 45463739 + 0.7449989148481 NA intron (NM_001360526, intron 12 of 15) intron (NM_001360526, intron 12 of 15) 66586 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_58_35_0.429476083880368_5.3846630433825_0.7449989148481-2 chr11 22287452 22288076 + 0.7449989148481 NA promoter-TSS (NM_153078) promoter-TSS (NM_153078) -969 NM_001252515 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding common_peak1_57_35_0.404988019934954_5.37241901140979_0.7449989148481 chr12 31269035 31270069 + 0.7449989148481 NA intron (NM_008482, intron 3 of 32) intron (NM_008482, intron 3 of 32) 4258 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_57_35_0.404988019934954_5.37241901140979_0.7449989148481-5 chr19 41476270 41476744 + 0.7449989148481 NA Intergenic Intergenic -48745 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak1_58_35_0.429476083880368_5.3846630433825_0.7449989148481-3 chr13 104288026 104288643 + 0.7449989148481 NA intron (NR_136938, intron 1 of 26) intron (NR_136938, intron 1 of 26) 499 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_57_35_0.404988019934954_5.37241901140979_0.7449989148481-4 chr16 93150013 93150581 + 0.7449989148481 NA Intergenic Intergenic 202892 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_131_88_0.277222594284872_6.61434472810883_0.744959901740473 chr10 17011450 17012456 + 0.744959901740473 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 83829 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_106_108_-0.316018287747768_6.61017518090304_0.744959901740448 chr11 94321360 94322262 + 0.744959901740448 NA non-coding (NR_155068, exon 1 of 11) non-coding (NR_155068, exon 1 of 11) 152 NR_155069 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding common_peak2_96_98_-0.317746065668532_6.47048358724534_0.744766711958259 chr11 49203575 49204213 + 0.744766711958259 NA intron (NM_001024846, intron 1 of 4) intron (NM_001024846, intron 1 of 4) 394 NM_009562 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak2_96_98_-0.317746065668532_6.47048358724534_0.744766711958259-2 chr12 27489436 27490880 + 0.744766711958259 NA Intergenic Intergenic -147440 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_119_79_0.294494491165278_6.46917534047_0.744766711958259 chr11 23306991 23307898 + 0.744766711958259 NA intron (NM_001190401, intron 1 of 79) intron (NM_001190401, intron 1 of 79) 549 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak2_95_98_-0.332590932780847_6.46306115368919_0.744766711958259 chr2 83758923 83760045 + 0.744766711958259 NA intron (NM_008402, intron 4 of 29) intron (NM_008402, intron 4 of 29) 35087 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_218_206_-0.215290899279188_7.58584150785973_0.744765980529657 chr8 86745190 86746778 + 0.744765980529657 NA promoter-TSS (NM_009172) promoter-TSS (NM_009172) 22 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak1_187_179_-0.232301752174108_7.37570222024262_0.743626226859181 chr19 12795743 12797299 + 0.743626226859181 NA promoter-TSS (NR_024093) promoter-TSS (NR_024093) 328 NM_001361971 107321 Mm.313136 NM_134152 ENSMUSG00000024696 Lpxn 4933402K05Rik|A530083L21Rik|AV278559|LDPL leupaxin protein-coding common_peak1_66_71_-0.388371983801925_5.97573900954135_0.743411445750435 chr11 120597647 120598406 + 0.743411445750435 NA promoter-TSS (NM_025389) promoter-TSS (NM_025389) 339 NM_011568 21681 Mm.1886 NM_011568 ENSMUSG00000025134 Alyref Aly|Ref1|Ref1-I|Refbp1|Tho4|Thoc4 Aly/REF export factor protein-coding common_peak2_66_71_-0.388371983801925_5.97573900954135_0.743411445750435 chr15 79027740 79028376 + 0.743411445750435 NA promoter-TSS (NM_008197) promoter-TSS (NM_008197) -154 NM_008197 14958 Mm.24350 NM_008197 ENSMUSG00000096210 H1f0 D130017D06Rik|H1(0)|H1fv H1 histone family, member 0 protein-coding common_peak2_86_55_0.348393701547117_5.98155177283116_0.743411445750435 chr1 135769150 135770146 + 0.743411445750435 NA TTS (NM_013750) TTS (NM_013750) 3563 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak2_86_55_0.348393701547117_5.98155177283116_0.743411445750435-2 chr3 84259121 84259751 + 0.743411445750435 NA 5' UTR (NM_001271727, exon 1 of 12) 5' UTR (NM_001271727, exon 1 of 12) 343 NM_001271727 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak2_66_71_-0.388371983801925_5.97573900954135_0.743411445750435-2 chr5 114774673 114775263 + 0.743411445750435 NA promoter-TSS (NM_026718) promoter-TSS (NM_026718) 15 NR_027872 67642 Mm.482535 NM_175120 ENSMUSG00000092183 4930515G01Rik - RIKEN cDNA 4930515G01 gene ncRNA common_peak2_66_71_-0.388371983801925_5.97573900954135_0.743411445750435-3 chr6 55179927 55180650 + 0.743411445750435 NA Intergenic Intergenic -5298 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak2_86_55_0.348393701547117_5.98155177283116_0.743411445750435-3 chr5 76183948 76184792 + 0.743411445750435 NA intron (NM_011626, intron 1 of 5) CpG 490 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding common_peak1_131_130_-0.28046697628618_6.89318951339436_0.743254576720991-2 chr8 105900415 105901433 + 0.743254576720991 NA intron (NM_173432, intron 1 of 2) intron (NM_173432, intron 1 of 2) 450 NM_173432 244631 Mm.27627 NM_173432 ENSMUSG00000048310 Pskh1 AW539964|E130013P03Rik|b2b1230Clo protein serine kinase H1 protein-coding common_peak1_131_130_-0.28046697628618_6.89318951339436_0.743254576720991 chr10 68276183 68278444 + 0.743254576720991 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 1413 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_119_119_-0.290468009555878_6.76165659083058_0.743020633192633-2 chr11 106919437 106920756 + 0.743020633192633 NA intron (NM_025481, intron 1 of 18) CpG 619 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak2_119_119_-0.290468009555878_6.76165659083058_0.743020633192633-3 chr8 125342019 125343280 + 0.743020633192633 NA Intergenic Intergenic 150184 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_119_119_-0.290468009555878_6.76165659083058_0.743020633192633 chr10 19167251 19169529 + 0.743020633192633 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 1152 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_57_63_-0.425086978622733_5.78745651068863_0.742542878650758-3 chr9 104262189 104262878 + 0.742542878650758 NA intron (NM_001359740, intron 1 of 56) CpG 397 NM_001359740 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding common_peak2_57_63_-0.425086978622733_5.78745651068863_0.742542878650758-2 chr17 5739991 5741022 + 0.742542878650758 NA intron (NM_146073, intron 8 of 8) intron (NM_146073, intron 8 of 8) -58151 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak2_58_63_-0.40059891467732_5.79970054266134_0.742542878650758-5 chr6 99522152 99522962 + 0.742542878650758 NA Intergenic CpG-12329 -1564 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_57_63_-0.425086978622733_5.78745651068863_0.742542878650758-3 chr7 19271079 19271786 + 0.742542878650758 NA intron (NM_009499, intron 1 of 12) CpG 422 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_58_63_-0.40059891467732_5.79970054266134_0.742542878650758-2 chr17 12326961 12327834 + 0.742542878650758 NA TTS (NR_045290) TTS (NR_045290) 8544 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA common_peak1_57_63_-0.425086978622733_5.78745651068863_0.742542878650758 chr10 127643148 127643640 + 0.742542878650758 NA intron (NM_009284, intron 1 of 21) intron (NM_009284, intron 1 of 21) 408 NM_009284 20852 Mm.121721 NM_009284 ENSMUSG00000002147 Stat6 - signal transducer and activator of transcription 6 protein-coding common_peak1_58_63_-0.40059891467732_5.79970054266134_0.742542878650758-2 chr7 109518313 109518917 + 0.742542878650758 NA promoter-TSS (NM_011975) promoter-TSS (NM_011975) -580 NM_011975 26451 Mm.305750 NM_011975 ENSMUSG00000046364 Rpl27a L27'|L27A|L29 ribosomal protein L27A protein-coding common_peak2_58_63_-0.40059891467732_5.79970054266134_0.742542878650758-4 chr19 56459955 56461085 + 0.742542878650758 NA Intergenic Intergenic -1117 NM_001164263 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding common_peak2_58_63_-0.40059891467732_5.79970054266134_0.742542878650758 chr16 85901151 85902068 + 0.742542878650758 NA promoter-TSS (NM_011782) promoter-TSS (NM_011782) -484 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak2_57_63_-0.425086978622733_5.78745651068863_0.742542878650758 chr1 105432231 105433238 + 0.742542878650758 NA Intergenic MER103C|DNA|hAT-Charlie -76024 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_57_63_-0.425086978622733_5.78745651068863_0.742542878650758-4 chrX 20688189 20688975 + 0.742542878650758 NA 5' UTR (NM_011049, exon 1 of 16) 5' UTR (NM_011049, exon 1 of 16) 156 NM_011049 18555 Mm.102574 NM_011049 ENSMUSG00000031065 Cdk16 Crk5|Pctaire1|Pctk1 cyclin-dependent kinase 16 protein-coding common_peak1_58_63_-0.40059891467732_5.79970054266134_0.742542878650758 chr4 126967825 126968560 + 0.742542878650758 NA promoter-TSS (NM_001357201) promoter-TSS (NM_001357201) -269 NM_001114399 67785 Mm.165401 NM_001114399 ENSMUSG00000042446 Zmym4 6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425 zinc finger, MYM-type 4 protein-coding common_peak1_57_63_-0.425086978622733_5.78745651068863_0.742542878650758-2 chr5 77407178 77407876 + 0.742542878650758 NA intron (NM_001159518, intron 1 of 5) CpG 518 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_58_63_-0.40059891467732_5.79970054266134_0.742542878650758-3 chr17 78386803 78387643 + 0.742542878650758 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 30929 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_289_268_-0.191002401571966_7.97596116177064_0.742514942426254 chr11 75459243 75461267 + 0.742514942426254 NA Intergenic Intergenic -1284 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak2_203_193_-0.22335634176971_7.48823467130227_0.742394652566209 chr11 120186712 120189777 + 0.742394652566209 NA intron (NR_030682, intron 2 of 2) CpG 1612 NR_030682 100042332 Mm.269766 NR_030682 2810410L24Rik - RIKEN cDNA 2810410L24 gene ncRNA common_peak2_108_71_0.308769883686134_6.32430994328538_0.74168542740463 chr11 23665529 23666482 + 0.74168542740463 NA promoter-TSS (NM_023651) promoter-TSS (NM_023651) 29 NM_028304 74467 Mm.29536 NM_028304 ENSMUSG00000020280 Pus10 2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139 pseudouridylate synthase 10 protein-coding common_peak2_108_71_0.308769883686134_6.32430994328538_0.74168542740463-3 chr3 87929765 87930815 + 0.74168542740463 NA promoter-TSS (NM_177663) promoter-TSS (NM_177663) -24 NM_177663 229504 Mm.45744 NM_177663 ENSMUSG00000048039 Isg20l2 4930429N24|C80587 interferon stimulated exonuclease gene 20-like 2 protein-coding common_peak2_108_71_0.308769883686134_6.32430994328538_0.74168542740463-2 chr3 41563134 41564110 + 0.74168542740463 NA promoter-TSS (NM_001130185) promoter-TSS (NM_001130185) -129 NM_001130185 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak2_86_89_-0.336104472724954_6.3238008599672_0.74168542740463 chr14 20545588 20546511 + 0.74168542740463 NA promoter-TSS (NR_033571) promoter-TSS (NR_033571) -244 NR_033571 75602 Mm.437061 NR_033571 ENSMUSG00000084925 1810062O18Rik - RIKEN cDNA 1810062O18 gene ncRNA common_peak2_220_154_0.215094623153044_7.38367171685076_0.740970559781547-2 chr8 31167885 31169244 + 0.740970559781547 NA intron (NM_026453, intron 1 of 9) CpG 160 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding common_peak2_220_154_0.215094623153044_7.38367171685076_0.740970559781547 chr12 111429636 111431323 + 0.740970559781547 NA intron (NM_001289487, intron 13 of 13) intron (NM_001289487, intron 13 of 13) -12182 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak2_76_80_-0.359015550713435_6.16034222752791_0.740919593040607-2 chr2 34770905 34771757 + 0.740919593040607 NA promoter-TSS (NM_022310) promoter-TSS (NM_022310) -759 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak2_76_80_-0.359015550713435_6.16034222752791_0.740919593040607 chr19 28191211 28192306 + 0.740919593040607 NA Intergenic Intergenic -180592 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_97_63_0.326303163792811_6.16315158189641_0.740919593040607 chr8 69395114 69395524 + 0.740919593040607 NA non-coding (NR_038044, exon 1 of 1) non-coding (NR_038044, exon 1 of 1) 225 NR_038044 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|Gm10311 predicted gene 10033 ncRNA common_peak1_132_89_0.271914428216358_6.62781031043785_0.740460332274311 chr11 60932078 60932933 + 0.740460332274311 NA promoter-TSS (NR_027800) promoter-TSS (NR_027800) 448 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak2_108_109_-0.302664828396214_6.63002729932655_0.740460332274311 chr11 50212409 50213522 + 0.740460332274311 NA Intergenic Intergenic -2145 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508 chr11 23256645 23256890 + 0.739965416525508 NA intron (NM_001035226, intron 2 of 25) GC_rich|Low_complexity|Low_complexity 726 NM_134014 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-7 chr5 93096792 93097074 + 0.739965416525508 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 3517 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-11 chr8 110827932 110828173 + 0.739965416525508 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 10546 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-19 chr3 65298196 65298471 + 0.739965416525508 NA non-coding (NR_126080, exon 2 of 5) non-coding (NR_126080, exon 2 of 5) 4352 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-5 chr17 25014544 25014888 + 0.739965416525508 NA intron (NM_020608, intron 1 of 20) intron (NM_020608, intron 1 of 20) 514 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-8 chr9 62810489 62810767 + 0.739965416525508 NA intron (NM_010193, intron 1 of 1) intron (NM_010193, intron 1 of 1) 1020 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-7 chr15 10486117 10486469 + 0.739965416525508 NA promoter-TSS (NM_026396) promoter-TSS (NM_026396) 255 NM_001289447 19355 Mm.38376 NM_011232 ENSMUSG00000022248 Rad1 mRAD1 RAD1 checkpoint DNA exonuclease protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-15 chr4 107364331 107364626 + 0.739965416525508 NA Intergenic Intergenic -3306 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak1_14_20_-0.754729898006387_4.01495247377557_0.739965416525508 chr1 9700814 9701067 + 0.739965416525508 NA promoter-TSS (NM_001290397) promoter-TSS (NM_001290397) -731 NM_008651 17864 Mm.479 NM_008651 ENSMUSG00000025912 Mybl1 A-myb|G1-419-6|repro9 myeloblastosis oncogene-like 1 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-8 chr16 93712045 93712391 + 0.739965416525508 NA intron (NM_027293, intron 1 of 36) CpG 311 NM_027293 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508 chr1 138342967 138343443 + 0.739965416525508 NA Intergenic Intergenic 69467 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508 chr1 135169565 135169796 + 0.739965416525508 NA Intergenic Intergenic -1999 NM_134438 171469 Mm.272290 NM_134438 ENSMUSG00000026424 Gpr37l1 AW047233|CAG-18|D0Kist8 G protein-coupled receptor 37-like 1 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-2 chr11 96288119 96288500 + 0.739965416525508 NA intron (NM_010460, intron 1 of 1) intron (NM_010460, intron 1 of 1) 1663 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-10 chr18 60656979 60657424 + 0.739965416525508 NA Intergenic Intergenic -6209 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-29 chr9 58109084 58109375 + 0.739965416525508 NA intron (NM_001166282, intron 3 of 19) intron (NM_001166282, intron 3 of 19) -6932 NM_001311085 382077 Mm.335193 NM_029212 ENSMUSG00000037716 Ccdc33 4930535E21Rik|Gm1117|Tzip1 coiled-coil domain containing 33 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-4 chr12 69757722 69758360 + 0.739965416525508 NA intron (NM_183294, intron 4 of 9) intron (NM_183294, intron 4 of 9) 5903 NR_030450 751538 NR_030450 ENSMUSG00000076065 Mir681 Mirn681|mmu-mir-681 microRNA 681 ncRNA common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-5 chr4 130112036 130112286 + 0.739965416525508 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 4605 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-5 chr15 99399439 99399695 + 0.739965416525508 NA intron (NM_001171036, intron 2 of 10) intron (NM_001171036, intron 2 of 10) 6348 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-12 chr8 25062188 25062487 + 0.739965416525508 NA intron (NM_031257, intron 5 of 11) intron (NM_031257, intron 5 of 11) -23375 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-9 chr15 99017651 99017895 + 0.739965416525508 NA Intergenic Intergenic -12118 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-5 chr12 110544141 110544477 + 0.739965416525508 NA intron (NM_001081457, intron 3 of 12) intron (NM_001081457, intron 3 of 12) -47065 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-4 chr12 109418288 109418685 + 0.739965416525508 NA Intergenic MIR|SINE|MIR -34337 NR_033813 13386 Mm.157069 NM_010052 ENSMUSG00000040856 Dlk1 AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1 delta like non-canonical Notch ligand 1 protein-coding common_peak1_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-2 chr12 106010575 106010892 + 0.739965416525508 NA intron (NM_001029843, intron 1 of 13) CpG 470 NM_001029843 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-5 chr16 30550200 30550535 + 0.739965416525508 NA exon (NM_172614, exon 1 of 10) exon (NM_172614, exon 1 of 10) 211 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-11 chr4 59581755 59582078 + 0.739965416525508 NA intron (NM_024255, intron 1 of 10) CpG 353 NM_024255 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-12 chr19 9028408 9028681 + 0.739965416525508 NA intron (NM_001039959, intron 4 of 5) intron (NM_001039959, intron 4 of 5) 39260 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-3 chr15 84232210 84232419 + 0.739965416525508 NA intron (NM_133167, intron 1 of 12) CpG 271 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-9 chr8 114612869 114613191 + 0.739965416525508 NA intron (NM_019573, intron 5 of 8) intron (NM_019573, intron 5 of 8) 173378 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-17 chr2 156223317 156223773 + 0.739965416525508 NA intron (NM_172674, intron 2 of 17) intron (NM_172674, intron 2 of 17) 26898 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-6 chr19 30031778 30032116 + 0.739965416525508 NA intron (NM_144873, intron 1 of 15) intron (NM_144873, intron 1 of 15) 1434 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-4 chr14 105589744 105590135 + 0.739965416525508 NA intron (NR_102319, intron 1 of 2) intron (NR_102319, intron 1 of 2) 390 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-4 chr15 33015511 33015842 + 0.739965416525508 NA intron (NM_008304, intron 1 of 4) intron (NM_008304, intron 1 of 4) -67453 NM_018755 54381 Mm.158251 NM_018755 ENSMUSG00000039007 Cpq 1190003P12Rik|2610034C17Rik|Hls2|Lal-1|Pgcp carboxypeptidase Q protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-17 chr7 37772096 37772404 + 0.739965416525508 NA Intergenic CpG-13025 -2498 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-24 chr6 129232407 129232796 + 0.739965416525508 NA TTS (NR_040265) TTS (NR_040265) 5444 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-4 chr12 78748448 78748670 + 0.739965416525508 NA promoter-TSS (NM_019579) promoter-TSS (NM_019579) -388 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-22 chr5 64232062 64232298 + 0.739965416525508 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 1823 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-2 chr11 30269000 30269496 + 0.739965416525508 NA Intergenic Intergenic -49476 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508 chr10 84438287 84438551 + 0.739965416525508 NA intron (NM_001004363, intron 1 of 6) intron (NM_001004363, intron 1 of 6) 2052 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508 chr13 102745319 102745608 + 0.739965416525508 NA intron (NM_175171, intron 26 of 28) intron (NM_175171, intron 26 of 28) -14792 NR_130318 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508 chr1 133977247 133977734 + 0.739965416525508 NA Intergenic LTR85c|LTR|Gypsy? -56089 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-2 chr1 184782645 184782953 + 0.739965416525508 NA Intergenic Intergenic 28501 NM_001290273 66112 Mm.272457 NM_001081361 ENSMUSG00000026621 Marc1 1300013F15Rik|Mosc1 mitochondrial amidoxime reducing component 1 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-12 chr19 11618855 11619119 + 0.739965416525508 NA exon (NM_013516, exon 5 of 7) exon (NM_013516, exon 5 of 7) 4732 NM_001276330 14126 Mm.329735 NM_013516 ENSMUSG00000024680 Ms4a2 FcRB|Fce1b|Fcer1b|Fcrbeta|Ms4a1|fcERI membrane-spanning 4-domains, subfamily A, member 2 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-3 chr12 80211894 80212240 + 0.739965416525508 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 48304 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-7 chr16 30514097 30514401 + 0.739965416525508 NA 3' UTR (NM_172614, exon 10 of 10) 3' UTR (NM_172614, exon 10 of 10) 36329 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-11 chr18 23989878 23990340 + 0.739965416525508 NA intron (NM_011755, intron 1 of 2) intron (NM_011755, intron 1 of 2) 475 NM_011755 22694 Mm.290596 NM_011755 ENSMUSG00000063281 Zfp35 Zfp-35|Znf271|mszf13|mszf20-1|mszf28|mszf68 zinc finger protein 35 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-14 chr9 102752744 102753119 + 0.739965416525508 NA intron (NR_033301, intron 3 of 3) intron (NR_033301, intron 3 of 3) 13283 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-14 chr3 66007329 66007587 + 0.739965416525508 NA Intergenic Intergenic -49209 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-3 chr13 28603915 28604349 + 0.739965416525508 NA intron (NR_045054, intron 6 of 7) intron (NR_045054, intron 6 of 7) 106741 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-7 chr8 9960615 9960946 + 0.739965416525508 NA Intergenic MTE2b|LTR|ERVL-MaLR 15543 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-27 chr7 139796253 139796652 + 0.739965416525508 NA Intergenic Intergenic 17434 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-5 chr13 15585716 15586064 + 0.739965416525508 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 122167 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-8 chr6 97869563 97869837 + 0.739965416525508 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) -60117 NM_001178049 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-2 chr11 70019454 70019794 + 0.739965416525508 NA intron (NM_007864, intron 1 of 19) intron (NM_007864, intron 1 of 19) 1019 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-21 chr4 133966913 133967208 + 0.739965416525508 NA intron (NM_016957, intron 1 of 5) intron (NM_016957, intron 1 of 5) 931 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-3 chr11 60346406 60346662 + 0.739965416525508 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 6371 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508 chr1 71895072 71895458 + 0.739965416525508 NA Intergenic Intergenic 7153 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-20 chr9 14215710 14216018 + 0.739965416525508 NA Intergenic Intergenic -60437 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-2 chr2 31953114 31953550 + 0.739965416525508 NA intron (NM_145144, intron 2 of 5) RSINE1|SINE|B4 3029 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-10 chr15 102043621 102044006 + 0.739965416525508 NA Intergenic Intergenic 15597 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-11 chrX 74429039 74429418 + 0.739965416525508 NA promoter-TSS (NM_010547) promoter-TSS (NM_010547) -67 NM_008062 14381 Mm.27210 NM_008062 ENSMUSG00000031400 G6pdx G28A|G6pd|Gpdx glucose-6-phosphate dehydrogenase X-linked protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-26 chr7 139234327 139234713 + 0.739965416525508 NA intron (NM_027164, intron 8 of 10) intron (NM_027164, intron 8 of 10) -13962 NM_001033206 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-2 chr11 99386187 99386406 + 0.739965416525508 NA intron (NM_010660, intron 6 of 7) intron (NM_010660, intron 6 of 7) 3068 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-6 chr13 92072867 92073092 + 0.739965416525508 NA Intergenic Intergenic -84937 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-7 chr2 140103393 140103771 + 0.739965416525508 NA Intergenic Intergenic -36777 NR_110351 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-8 chr6 33870630 33870961 + 0.739965416525508 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -158653 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-16 chr5 151252263 151252646 + 0.739965416525508 NA Intergenic Intergenic -62261 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-13 chr9 6550200 6550589 + 0.739965416525508 NA Intergenic Intergenic -283847 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-3 chr11 117989579 117989884 + 0.739965416525508 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 2874 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-10 chr7 24316775 24317116 + 0.739965416525508 NA promoter-TSS (NM_001199321) promoter-TSS (NM_001199321) -279 NM_001199321 22756 Mm.295762 NM_009568 ENSMUSG00000074282 Zfp94 - zinc finger protein 94 protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-3 chr11 87422630 87422829 + 0.739965416525508 NA intron (NM_031386, intron 1 of 30) intron (NM_031386, intron 1 of 30) -4862 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-6 chr16 58408564 58408801 + 0.739965416525508 NA 5' UTR (NM_028523, exon 1 of 16) 5' UTR (NM_028523, exon 1 of 16) 147 NM_028523 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-8 chr14 76759299 76759793 + 0.739965416525508 NA promoter-TSS (NR_153763) promoter-TSS (NR_153763) -585 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-2 chr2 118901758 118901988 + 0.739965416525508 NA intron (NM_001045523, intron 1 of 6) CpG 258 NM_001045523 228536 Mm.330487 NM_001045523 ENSMUSG00000040007 Bahd1 AL022997|AW541238|Gm117|mKIAA0945 bromo adjacent homology domain containing 1 protein-coding common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-4 chr15 78806349 78806613 + 0.739965416525508 NA Intergenic Intergenic -3439 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak1_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-3 chr9 45936395 45936621 + 0.739965416525508 NA promoter-TSS (NM_011526) promoter-TSS (NM_011526) -450 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-19 chr8 46939639 46940107 + 0.739965416525508 NA Intergenic Intergenic -47014 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-6 chr15 3270705 3270997 + 0.739965416525508 NA promoter-TSS (NM_009155) promoter-TSS (NM_009155) 40 NM_001042614 20363 Mm.392203 NM_009155 ENSMUSG00000064373 Selenop AU018766|D15Ucla1|Se-P|Sepp1|selp selenoprotein P protein-coding common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-9 chr9 77744419 77744718 + 0.739965416525508 NA Intergenic Intergenic -9967 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-20 chr4 45084251 45084516 + 0.739965416525508 NA intron (NM_001024142, intron 1 of 10) CpG 221 NM_001024142 269529 Mm.389552 NM_001024142 ENSMUSG00000048232 Fbxo10 FBX10|Gm634 F-box protein 10 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-8 chr7 142431646 142432048 + 0.739965416525508 NA Intergenic Intergenic -3003 NR_153437 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-8 chr15 101266888 101267216 + 0.739965416525508 NA intron (NM_010444, intron 1 of 6) CpG 206 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|NUR77-1|NUR77-2|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-18 chr3 27705944 27706803 + 0.739965416525508 NA intron (NM_001356953, intron 1 of 26) B3A|SINE|B2 4079 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-6 chr16 21794098 21794304 + 0.739965416525508 NA promoter-TSS (NR_037957) promoter-TSS (NR_037957) -146 NR_037958 100043489 Mm.326535 NR_037957 ENSMUSG00000097290 1300002E11Rik 1500026P21Rik RIKEN cDNA 1300002E11 gene ncRNA unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-25 chr7 80134147 80134778 + 0.739965416525508 NA Intergenic ID2|SINE|ID -19112 NM_173011 269951 Mm.246432 NM_173011 ENSMUSG00000030541 Idh2 E430004F23|IDPm|Idh-2 isocitrate dehydrogenase 2 (NADP+), mitochondrial protein-coding unique_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-3 chr3 121891391 121891614 + 0.739965416525508 NA Intergenic Intergenic -61727 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-10 chr8 121889645 121890093 + 0.739965416525508 NA intron (NM_011404, intron 2 of 9) intron (NM_011404, intron 2 of 9) 17817 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-9 chr8 116922037 116922255 + 0.739965416525508 NA promoter-TSS (NM_026844) promoter-TSS (NM_026844) 406 NM_028131 72155 Mm.23185 NM_028131 ENSMUSG00000031756 Cenpn 2610510J17Rik|AI426416|AW545024 centromere protein N protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-15 chr2 152552981 152553499 + 0.739965416525508 NA Intergenic Intergenic -13199 NM_001001444 75400 Mm.45560 NM_001001444 ENSMUSG00000044249 Defb29 0610030I09Rik|BD-29|mBD-29 defensin beta 29 protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-11 chr18 75492161 75492603 + 0.739965416525508 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -22263 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-28 chr8 80853032 80853360 + 0.739965416525508 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 27283 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-10 chr9 106198979 106199317 + 0.739965416525508 NA promoter-TSS (NM_026447) promoter-TSS (NM_026447) 85 NM_026447 67905 Mm.23018 NM_026447 ENSMUSG00000020253 Ppm1m 2810423O19Rik|AW610647|C77250|PP2Ceta protein phosphatase 1M protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-13 chr19 53731373 53731632 + 0.739965416525508 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) 54196 NM_001170847 73713 Mm.313695 NM_001170847 ENSMUSG00000043639 Rbm20 1110018J23Rik|2010003H22Rik|AI646761 RNA binding motif protein 20 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-15 chr9 107975640 107975897 + 0.739965416525508 NA intron (NM_023738, intron 1 of 23) intron (NM_023738, intron 1 of 23) 201 NM_023738 74153 Mm.277125 NM_023738 ENSMUSG00000032596 Uba7 1300004C08Rik|Ube1l ubiquitin-like modifier activating enzyme 7 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-9 chr6 112949024 112949323 + 0.739965416525508 NA Intergenic Intergenic -1907 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak1_13_20_-0.853563349413591_3.96553574807197_0.739965416525508 chr6 82754212 82754439 + 0.739965416525508 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 20129 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-6 chr6 108235955 108236271 + 0.739965416525508 NA intron (NM_010585, intron 2 of 61) intron (NM_010585, intron 2 of 61) 23017 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-14 chr2 128380216 128380548 + 0.739965416525508 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 48969 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-9 chr2 152680055 152680323 + 0.739965416525508 NA intron (NM_010376, intron 2 of 11) intron (NM_010376, intron 2 of 11) -6959 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-10 chr2 168079273 168079564 + 0.739965416525508 NA Intergenic Intergenic -1586 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-9 chr18 44669099 44669523 + 0.739965416525508 NA intron (NR_026853, intron 2 of 4) intron (NR_026853, intron 2 of 4) -7045 NM_001085374 328949 Mm.312511 NM_001033406 ENSMUSG00000071856 Mcc D18Ertd451e|E330037C19 mutated in colorectal cancers protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-6 chr12 113149269 113149713 + 0.739965416525508 NA Intergenic Intergenic -2521 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-4 chr16 57281886 57282200 + 0.739965416525508 NA intron (NM_027651, intron 2 of 7) intron (NM_027651, intron 2 of 7) 10808 NM_027651 71027 Mm.158563 NM_027651 ENSMUSG00000022753 Tmem30c 4933401B01Rik|4933409A18Rik|Cdc50c transmembrane protein 30C protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-2 chr11 98944813 98945266 + 0.739965416525508 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 5328 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508-2 chr12 27387098 27387380 + 0.739965416525508 NA Intergenic Intergenic -44521 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-7 chr6 31105150 31105388 + 0.739965416525508 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -42176 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-16 chr2 152903784 152904059 + 0.739965416525508 NA Intergenic Intergenic -7431 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-7 chr13 51947254 51947748 + 0.739965416525508 NA Intergenic Intergenic 100826 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-5 chr14 105589034 105589368 + 0.739965416525508 NA promoter-TSS (NR_102319) promoter-TSS (NR_102319) -348 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA common_peak2_23_12_0.610435928304157_4.00565768229317_0.739965416525508-3 chr15 33907576 33907825 + 0.739965416525508 NA Intergenic Intergenic -175019 NM_001357926 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-23 chr5 142628871 142629205 + 0.739965416525508 NA promoter-TSS (NM_178398) promoter-TSS (NM_178398) -546 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak1_13_20_-0.853563349413591_3.96553574807197_0.739965416525508 chr1 13372967 13373164 + 0.739965416525508 NA promoter-TSS (NM_001302702) promoter-TSS (NM_001302702) -636 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak2_13_20_-0.853563349413591_3.96553574807197_0.739965416525508 chr10 111550132 111550435 + 0.739965416525508 NA Intergenic Intergenic 43990 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_14_20_-0.754729898006387_4.01495247377557_0.739965416525508-18 chr7 73962872 73963229 + 0.739965416525508 NA intron (NM_009181, intron 4 of 5) intron (NM_009181, intron 4 of 5) 50632 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding unique_peak1_23_12_0.610435928304157_4.00565768229317_0.739965416525508-13 chr2 93462029 93462338 + 0.739965416525508 NA promoter-TSS (NM_001271461) promoter-TSS (NM_001271461) 319 NM_001271430 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding common_peak1_97_99_-0.317553025981914_6.48507967678377_0.739789898628689 chr4 149995546 149996482 + 0.739789898628689 NA exon (NM_173371, exon 2 of 5) exon (NM_173371, exon 2 of 5) 7222 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_160_109_0.25609765827248_6.9094085426609_0.739558950667029 chr12 29938097 29939654 + 0.739558950667029 NA intron (NM_181395, intron 1 of 22) intron (NM_181395, intron 1 of 22) 839 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak1_160_109_0.25609765827248_6.9094085426609_0.739558950667029-2 chr7 80992595 80994277 + 0.739558950667029 NA promoter-TSS (NM_178707) promoter-TSS (NM_178707) -248 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 A730014M16Rik|Znf592 zinc finger protein 592 protein-coding common_peak2_120_120_-0.29055247629827_6.77358699912546_0.738971686962306 chr9 13748474 13749880 + 0.738971686962306 NA promoter-TSS (NM_023858) promoter-TSS (NM_023858) -4 NR_024025 77116 Mm.210405 NM_023858 ENSMUSG00000031918 Mtmr2 6030445P13Rik myotubularin related protein 2 protein-coding common_peak1_120_120_-0.29055247629827_6.77358699912546_0.738971686962306 chr10 80798627 80799460 + 0.738971686962306 NA promoter-TSS (NM_023900) promoter-TSS (NM_023900) 308 NM_013651 20222 Mm.358633 NM_013651 ENSMUSG00000020211 Sf3a2 66kDa|AW047242|PRP11|SFA66|Sap62 splicing factor 3a, subunit 2 protein-coding common_peak2_146_99_0.26328257624554_6.77549747789749_0.738971686962281 chr9 64252381 64253626 + 0.738971686962281 NA intron (NM_008927, intron 1 of 10) intron (NM_008927, intron 1 of 10) 602 NM_008927 26395 Mm.248907 NM_008927 ENSMUSG00000004936 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen-activated protein kinase kinase 1 protein-coding common_peak2_189_181_-0.233084246046158_7.39125251717562_0.738346603491661 chr2 173257705 173259737 + 0.738346603491661 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 17812 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-2 chr19 30855852 30856551 + 0.738267116931592 NA intron (NM_001013833, intron 5 of 17) intron (NM_001013833, intron 5 of 17) 74761 NR_033643 625995 Mm.454508 NR_033643 Gm6642 EG625995 ubiquitin-like 5 pseudogene pseudo common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-11 chr8 127720364 127720788 + 0.738267116931592 NA Intergenic Intergenic 420924 NM_001013580 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-2 chr10 80406424 80406766 + 0.738267116931592 NA intron (NM_025650, intron 1 of 2) intron (NM_025650, intron 1 of 2) 226 NM_025650 66594 Mm.379119 NM_025650 ENSMUSG00000020163 Uqcr11 0710008D09Rik|AL022707|Uqcr ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-7 chr3 95694191 95694659 + 0.738267116931592 NA Intergenic Intergenic -6508 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-2 chr11 55417815 55418126 + 0.738267116931592 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 2110 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-3 chr13 109241566 109242195 + 0.738267116931592 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -82864 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-6 chr2 118179887 118180229 + 0.738267116931592 NA Intergenic Intergenic 68182 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-4 chr14 78537065 78537602 + 0.738267116931592 NA promoter-TSS (NM_001164503) promoter-TSS (NM_001164503) -473 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-4 chr14 28511778 28512224 + 0.738267116931592 NA intron (NM_001256224, intron 2 of 4) intron (NM_001256224, intron 2 of 4) 596 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-5 chr16 18249486 18249936 + 0.738267116931592 NA exon (NM_001080999, exon 2 of 12) exon (NM_001080999, exon 2 of 12) 828 NM_001081000 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding unique_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592 chr15 83466459 83466924 + 0.738267116931592 NA Intergenic Intergenic -2085 NM_001358643 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-10 chr7 130946639 130947046 + 0.738267116931592 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 10639 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-6 chr19 42268111 42268498 + 0.738267116931592 NA intron (NM_027694, intron 4 of 4) intron (NM_027694, intron 4 of 4) 11866 NR_037246 100526549 NR_037246 ENSMUSG00000093234 Mir3085 mir-3085|mmu-mir-3085 microRNA 3085 ncRNA common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-3 chr11 113264850 113265167 + 0.738267116931592 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -55339 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592 chr1 16617323 16617847 + 0.738267116931592 NA intron (NM_001271016, intron 1 of 6) intron (NM_001271016, intron 1 of 6) 1753 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-7 chr7 19083916 19084366 + 0.738267116931592 NA exon (NM_001190491, exon 1 of 13) exon (NM_001190491, exon 1 of 13) 292 NM_001190491 13400 Mm.6529 NM_032418 ENSMUSG00000030409 Dmpk DM|DMK|Dm15|MDPK|MT-PK dystrophia myotonica-protein kinase protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-8 chr7 39544726 39545125 + 0.738267116931592 NA Intergenic Intergenic 27159 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592 chr1 92131618 92132176 + 0.738267116931592 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 48444 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-5 chr17 45791606 45791929 + 0.738267116931592 NA Intergenic Intergenic 57261 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-3 chr19 42072531 42072821 + 0.738267116931592 NA Intergenic Intergenic 13694 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding common_peak1_35_20_0.499393825893944_4.64201433572573_0.738267116931592-9 chr7 66478698 66479167 + 0.738267116931592 NA Intergenic Intergenic -51455 NM_053080 56847 Mm.140988 NM_053080 ENSMUSG00000015134 Aldh1a3 ALDH6|RALDH3|V1 aldehyde dehydrogenase family 1, subfamily A3 protein-coding common_peak2_35_20_0.499393825893944_4.64201433572573_0.738267116931592-8 chr7 110780973 110781337 + 0.738267116931592 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 8551 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_23_30_-0.643320663941625_4.63253597841606_0.738267116931589 chr13 60660379 60660703 + 0.738267116931589 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 58330 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-2 chr5 139017337 139017739 + 0.738267116931589 NA 3' UTR (NM_001253890, exon 11 of 11) 3' UTR (NM_001253890, exon 11 of 11) -22585 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-5 chr2 168005961 168006439 + 0.738267116931589 NA exon (NM_001080708, exon 2 of 22) exon (NM_001080708, exon 2 of 22) 4393 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Ripor3 2310033K02Rik|Fam65c|Gm124 RIPOR family member 3 protein-coding common_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-4 chr2 59829537 59829976 + 0.738267116931589 NA intron (NM_001290659, intron 18 of 25) intron (NM_001290659, intron 18 of 25) 52850 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589 chr1 43148955 43149428 + 0.738267116931589 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 14770 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-2 chr13 69585473 69585946 + 0.738267116931589 NA intron (NM_175283, intron 4 of 4) intron (NM_175283, intron 4 of 4) 25754 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-2 chr3 97297566 97297904 + 0.738267116931589 NA Intergenic Intergenic -70371 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding common_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-3 chr17 84196044 84196567 + 0.738267116931589 NA intron (NM_183021, intron 36 of 37) L1M4|LINE|L1 -8358 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589-6 chrX 136245230 136245782 + 0.738267116931589 NA intron (NM_011712, intron 1 of 2) intron (NM_011712, intron 1 of 2) 426 NM_011712 22381 Mm.512 NM_011712 ENSMUSG00000042712 Tceal9 AL024233|Wbp5 transcription elongation factor A like 9 protein-coding unique_peak2_23_30_-0.643320663941625_4.63253597841606_0.738267116931589 chr1 82602644 82603167 + 0.738267116931589 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 15984 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak1_50_30_0.436470149177032_5.17243138497539_0.737357778720995-3 chr8 47930965 47931636 + 0.737357778720995 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 59251 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_50_30_0.436470149177032_5.17243138497539_0.737357778720995 chr11 85140416 85140738 + 0.737357778720995 NA promoter-TSS (NM_001029934) promoter-TSS (NM_001029934) -622 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak2_50_30_0.436470149177032_5.17243138497539_0.737357778720995 chr11 117830090 117830656 + 0.737357778720995 NA intron (NM_027827, intron 2 of 10) intron (NM_027827, intron 2 of 10) -4359 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding unique_peak1_50_30_0.436470149177032_5.17243138497539_0.737357778720995-3 chr9 87022016 87022458 + 0.737357778720995 NA exon (NM_024195, exon 1 of 16) exon (NM_024195, exon 1 of 16) 208 NM_001359962 266690 Mm.30166 NM_024195 ENSMUSG00000032872 Cyb5r4 2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r cytochrome b5 reductase 4 protein-coding common_peak2_50_30_0.436470149177032_5.17243138497539_0.737357778720995-2 chr3 27607510 27608139 + 0.737357778720995 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -22829 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_50_30_0.436470149177032_5.17243138497539_0.737357778720995 chr1 180813830 180814576 + 0.737357778720995 NA promoter-TSS (NM_008210) promoter-TSS (NM_008210) -598 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding common_peak1_50_30_0.436470149177032_5.17243138497539_0.737357778720995-2 chr3 87910756 87911650 + 0.737357778720995 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 4353 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding unique_peak1_50_30_0.436470149177032_5.17243138497539_0.737357778720995-2 chr2 33178278 33179489 + 0.737357778720995 NA intron (NM_001290570, intron 7 of 16) intron (NM_001290570, intron 7 of 16) -37078 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak1_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-2 chr1 134079968 134080539 + 0.737357778720989 NA Intergenic Intergenic -1098 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-5 chr5 146704024 146704610 + 0.737357778720989 NA Intergenic AT_rich|Low_complexity|Low_complexity 90639 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989 chr1 75124696 75125211 + 0.737357778720989 NA TTS (NM_194333) TTS (NM_194333) 8937 NM_194333 22626 Mm.68157 NM_194333 ENSMUSG00000026205 Slc23a3 SVCT3|Yspl1 solute carrier family 23 (nucleobase transporters), member 3 protein-coding common_peak1_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-3 chr17 27040729 27041028 + 0.737357778720989 NA Intergenic Intergenic 11619 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-6 chr6 120822282 120822600 + 0.737357778720989 NA intron (NM_007510, intron 1 of 8) CpG 257 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|Vma4|p31 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-2 chr19 32595555 32596134 + 0.737357778720989 NA 5' UTR (NM_001201470, exon 1 of 12) 5' UTR (NM_001201470, exon 1 of 12) 129 NM_001201470 23972 Mm.203916 NM_011864 ENSMUSG00000024899 Papss2 1810018P12Rik|AI159688|AtpsU2|Atpsk2|Sk2|bm 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding common_peak1_35_42_-0.534553506029393_5.1589880016874_0.737357778720989 chr1 65186829 65187222 + 0.737357778720989 NA promoter-TSS (NM_001111320) promoter-TSS (NM_001111320) 340 NM_011086 18711 Mm.38370 NM_011086 ENSMUSG00000025949 Pikfyve 5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235 phosphoinositide kinase, FYVE type zinc finger containing protein-coding common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-4 chr3 95217450 95217831 + 0.737357778720989 NA TTS (NM_019914) TTS (NM_019914) 183 NR_108026 100504029 Mm.478537 NR_108026 ENSMUSG00000097167 Gm16740 - predicted gene, 16740 ncRNA common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-7 chr7 95753152 95753817 + 0.737357778720989 NA Intergenic Intergenic -417760 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989 chr10 91167663 91168457 + 0.737357778720989 NA intron (NM_001080129, intron 1 of 8) intron (NM_001080129, intron 1 of 8) 2490 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-3 chr2 60546430 60547359 + 0.737357778720989 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 6414 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding common_peak1_35_42_-0.534553506029393_5.1589880016874_0.737357778720989-4 chr6 71992182 71992610 + 0.737357778720989 NA Intergenic Intergenic 50132 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak1_313_224_0.180581140234125_7.9040717613341_0.736989110646329 chr11 74723053 74725293 + 0.736989110646329 NA promoter-TSS (NR_037610) promoter-TSS (NR_037610) 211 NM_013625 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding common_peak2_67_42_0.37651112306111_5.61452031623265_0.736813861928694-4 chr9 31211133 31211729 + 0.736813861928694 NA intron (NM_001357698, intron 1 of 17) CpG 417 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding unique_peak2_50_56_-0.442223554600835_5.61177823686432_0.736813861928694 chr14 33337153 33338347 + 0.736813861928694 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 73274 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_67_42_0.37651112306111_5.61452031623265_0.736813861928694-3 chr8 75033655 75034028 + 0.736813861928694 NA intron (NM_001136259, intron 1 of 15) CpG 155 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding unique_peak1_67_42_0.37651112306111_5.61452031623265_0.736813861928694-2 chr8 107491454 107492231 + 0.736813861928694 NA intron (NM_025830, intron 6 of 23) B1_Mur2|SINE|Alu 55444 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_50_56_-0.442223554600835_5.61177823686432_0.736813861928694 chr1 151062694 151063187 + 0.736813861928694 NA Intergenic Intergenic -69505 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak1_50_56_-0.442223554600835_5.61177823686432_0.736813861928694 chr12 79648640 79649484 + 0.736813861928694 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 275671 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak2_67_42_0.37651112306111_5.61452031623265_0.736813861928694 chr1 130716318 130716735 + 0.736813861928694 NA promoter-TSS (NR_027859) promoter-TSS (NR_027859) -705 NR_027859 18640 Mm.249861 NM_008825 ENSMUSG00000026409 Pfkfb2 4930568D07Rik 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 protein-coding common_peak2_50_56_-0.442223554600835_5.61177823686432_0.736813861928694-2 chr12 35246728 35247256 + 0.736813861928694 NA Intergenic Intergenic -52095 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak1_67_42_0.37651112306111_5.61452031623265_0.736813861928694-2 chr4 43578656 43579356 + 0.736813861928694 NA promoter-TSS (NM_172692) promoter-TSS (NM_172692) -142 NM_172692 230101 Mm.229444 NM_172692 ENSMUSG00000028467 Gba2 F630034E04 glucosidase beta 2 protein-coding common_peak2_67_42_0.37651112306111_5.61452031623265_0.736813861928694-2 chr19 7217116 7217499 + 0.736813861928694 NA intron (NM_007750, intron 1 of 1) intron (NM_007750, intron 1 of 1) 309 NM_007750 12868 Mm.14022 NM_007750 ENSMUSG00000035885 Cox8a COX8L cytochrome c oxidase subunit VIIIa protein-coding common_peak1_67_42_0.37651112306111_5.61452031623265_0.736813861928694 chr1 135637086 135638144 + 0.736813861928694 NA Intergenic Intergenic 39839 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA common_peak1_50_56_-0.442223554600835_5.61177823686432_0.736813861928694-2 chr17 37002529 37003196 + 0.736813861928694 NA promoter-TSS (NR_033137) promoter-TSS (NR_033137) 337 NM_001013745 22715 Mm.305561 NM_009559 ENSMUSG00000036036 Zfp57 G19|Zfp-57 zinc finger protein 57 protein-coding common_peak2_50_56_-0.442223554600835_5.61177823686432_0.736813861928694-3 chr7 28158558 28159314 + 0.736813861928694 NA intron (NM_001164655, intron 16 of 19) intron (NM_001164655, intron 16 of 19) -10812 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding unique_peak1_67_42_0.37651112306111_5.61452031623265_0.736813861928694 chr6 81942280 81943185 + 0.736813861928694 NA intron (NM_177884, intron 7 of 16) intron (NM_177884, intron 7 of 16) 19063 NM_177884 330361 Mm.474487 NM_177884 ENSMUSG00000035125 Gcfc2 A130099G21|AW146020|GCF2|Tcf9 GC-rich sequence DNA binding factor 2 protein-coding common_peak2_67_72_-0.38704868111681_5.99630021832161_0.736462581125004 chr15 3581461 3582277 + 0.736462581125004 NA promoter-TSS (NM_001286370) promoter-TSS (NM_001286370) -27 NM_001286370 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding common_peak1_67_72_-0.38704868111681_5.99630021832161_0.736462581125004 chr6 86683861 86684811 + 0.736462581125004 NA intron (NM_025665, intron 1 of 5) intron (NM_025665, intron 1 of 5) 155 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding common_peak2_67_72_-0.38704868111681_5.99630021832161_0.736462581125004-3 chr7 113151831 113152528 + 0.736462581125004 NA Intergenic Intergenic -10164 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_87_56_0.339230408859074_6.00250521859428_0.736462581125004 chr6 140423685 140424945 + 0.736462581125004 NA intron (NM_144920, intron 1 of 30) CpG 216 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak2_67_72_-0.38704868111681_5.99630021832161_0.736462581125004-2 chr17 23828413 23828998 + 0.736462581125004 NA intron (NM_026305, intron 2 of 3) CpG 404 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding common_peak2_87_56_0.339230408859074_6.00250521859428_0.736462581125004 chr3 101600888 101601519 + 0.736462581125004 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 3504 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_109_72_0.301952762897677_6.34080094032886_0.736222529913312-4 chr7 27195414 27196150 + 0.736222529913312 NA promoter-TSS (NM_001243888) promoter-TSS (NM_001243888) 1 NM_001243888 414069 Mm.379069 NM_001243888 ENSMUSG00000078786 BC024978 - cDNA sequence BC024978 protein-coding common_peak1_109_72_0.301952762897677_6.34080094032886_0.736222529913312-3 chr15 27465700 27466450 + 0.736222529913312 NA promoter-TSS (NM_020332) promoter-TSS (NM_020332) -602 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_109_72_0.301952762897677_6.34080094032886_0.736222529913312 chr11 68901613 68902347 + 0.736222529913312 NA intron (NM_009080, intron 1 of 3) intron (NM_009080, intron 1 of 3) 391 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 - ribosomal protein L26 pseudogene pseudo common_peak1_109_72_0.301952762897677_6.34080094032886_0.736222529913312-2 chr11 103051735 103052822 + 0.736222529913312 NA exon (NM_008707, exon 4 of 12) exon (NM_008707, exon 4 of 12) 23735 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak2_109_72_0.301952762897677_6.34080094032886_0.736222529913312 chr6 52219285 52220316 + 0.736222529913312 NA Intergenic Intergenic -1227 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak1_87_90_-0.335674217174881_6.33995753161126_0.736222529913287 chr10 19044679 19046043 + 0.736222529913287 NA Intergenic Intergenic -29951 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_87_90_-0.335674217174881_6.33995753161126_0.736222529913287-2 chr2 26444542 26445252 + 0.736222529913287 NA intron (NM_153125, intron 1 of 29) CpG 319 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak1_134_90_0.277354129882098_6.64647170513975_0.73605121260799-2 chr17 46889037 46890211 + 0.73605121260799 NA promoter-TSS (NM_178385) promoter-TSS (NM_178385) -997 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak1_134_90_0.277354129882098_6.64647170513975_0.73605121260799 chr11 103261832 103263356 + 0.73605121260799 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 4807 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_134_90_0.277354129882098_6.64647170513975_0.73605121260799-3 chr3 100685125 100686327 + 0.73605121260799 NA promoter-TSS (NM_010763) promoter-TSS (NM_010763) -253 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak1_109_110_-0.302638544572412_6.6430965940639_0.73605121260799 chr13 42301688 42303158 + 0.73605121260799 NA intron (NM_010104, intron 1 of 4) intron (NM_010104, intron 1 of 4) 947 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_134_90_0.277354129882098_6.64647170513975_0.73605121260799-4 chr6 34720582 34721659 + 0.73605121260799 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 11676 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_134_132_-0.270133665420396_6.92021560279099_0.735924665659996 chr5 129020170 129021708 + 0.735924665659996 NA exon (NM_009391, exon 4 of 7) exon (NM_009391, exon 4 of 7) 783 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak2_191_132_0.234428272224328_7.17249657161335_0.735828534700291 chr2 125303104 125304362 + 0.735828534700291 NA intron (NM_007993, intron 64 of 65) intron (NM_007993, intron 64 of 65) 56218 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak2_222_156_0.20950392409259_7.39937271093792_0.735753792821899 chr3 57575964 57577195 + 0.735753792821899 NA promoter-TSS (NM_001168281) promoter-TSS (NM_001168281) -669 NM_001168281 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_257_182_0.197268335006355_7.61433400578722_0.735694531332074 chr18 35831120 35833770 + 0.735694531332074 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 2131 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_295_210_0.188696613630523_7.81544749552245_0.735646750459275 chr3 98376584 98379326 + 0.735646750459275 NA Intergenic Intergenic -4526 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_206_196_-0.224582292778457_7.50976067306715_0.735125951983995 chr5 142818050 142820153 + 0.735125951983995 NA Intergenic Intergenic -1714 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_240_169_0.205933089970588_7.512357481123_0.735125951983945 chr14 28506288 28508661 + 0.735125951983945 NA intron (NM_009524, intron 1 of 4) intron (NM_009524, intron 1 of 4) 2001 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak2_121_81_0.282549085111548_6.49882654717386_0.734923688692799 chr15 58258664 58259337 + 0.734923688692799 NA Intergenic Intergenic -44108 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak2_98_100_-0.317364875699826_6.49952904490188_0.734923688692799 chr18 67979608 67980672 + 0.734923688692799 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 46967 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_121_81_0.282549085111548_6.49882654717386_0.734923688692799-2 chr3 87906557 87907937 + 0.734923688692799 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 397 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_121_81_0.282549085111548_6.49882654717386_0.734923688692799-3 chr6 17065206 17065992 + 0.734923688692799 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 450 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak1_77_81_-0.35823320750876_6.1784354008637_0.734823907009333 chr19 27430171 27431080 + 0.734823907009333 NA promoter-TSS (NR_131940) promoter-TSS (NR_131940) 588 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA common_peak2_59_64_-0.398890247402569_5.82292268932717_0.734681648433378 chr13 34370904 34371638 + 0.734681648433378 NA Intergenic Intergenic -26089 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_59_64_-0.398890247402569_5.82292268932717_0.734681648433378-2 chr13 45681149 45681902 + 0.734681648433378 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 174081 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_59_64_-0.398890247402569_5.82292268932717_0.734681648433378 chr6 91684955 91685543 + 0.734681648433378 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 1182 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_77_49_0.3554626073346_5.82158749344202_0.734681648433366-2 chr2 121955959 121957012 + 0.734681648433366 NA promoter-TSS (NM_008545) promoter-TSS (NM_008545) -393 NM_008545 17147 Mm.389349 NM_008545 ENSMUSG00000074881 Mageb3 Mage-b3|Mage-ps1|Mage-rs3|Smage3 melanoma antigen, family B, 3 protein-coding common_peak1_77_49_0.3554626073346_5.82158749344202_0.734681648433366-3 chr4 155563801 155564387 + 0.734681648433366 NA intron (NM_001355599, intron 1 of 10) CpG 279 NM_001355599 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak1_77_49_0.3554626073346_5.82158749344202_0.734681648433366 chr11 119299544 119300024 + 0.734681648433366 NA intron (NM_138669, intron 1 of 11) CpG 259 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak1_59_36_0.414024199996935_5.41646546562742_0.734468890407008 chr12 86889034 86889611 + 0.734468890407008 NA Intergenic Intergenic -4508 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_43_49_-0.464680787177664_5.41151579618589_0.734468890407008 chr2 101796949 101797687 + 0.734468890407008 NA intron (NM_001355625, intron 1 of 8) CpG 389 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak2_43_49_-0.464680787177664_5.41151579618589_0.734468890407008 chr15 85678938 85679821 + 0.734468890407008 NA Intergenic Intergenic -24394 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_59_36_0.414024199996935_5.41646546562742_0.734468890407008-2 chr8 84147174 84147869 + 0.734468890407008 NA promoter-TSS (NM_001163752) promoter-TSS (NM_001163752) 232 NM_145970 212139 Mm.41424 NM_145970 ENSMUSG00000036686 Cc2d1a BC016188|Freud-1|Tape coiled-coil and C2 domain containing 1A protein-coding common_peak1_59_36_0.414024199996935_5.41646546562742_0.734468890407008-2 chr17 24470538 24471381 + 0.734468890407008 NA exon (NM_025954, exon 1 of 2) exon (NM_025954, exon 1 of 2) 486 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding common_peak2_59_36_0.414024199996935_5.41646546562742_0.734468890407008 chr15 81466361 81466595 + 0.734468890407008 NA intron (NM_019712, intron 1 of 4) CpG 162 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak2_43_49_-0.464680787177664_5.41151579618589_0.734468890407008 chr7 105399266 105400001 + 0.734468890407008 NA intron (NM_001242363, intron 1 of 12) intron (NM_001242363, intron 1 of 12) 421 NM_001242364 74349 Mm.30254 NM_199009 ENSMUSG00000044465 Fam160a2 4632419K20Rik|6530415H11Rik|FHIP family with sequence similarity 160, member A2 protein-coding common_peak2_29_36_-0.578920820429821_4.91999295541404_0.734130039933318-3 chr7 28954700 28955214 + 0.734130039933318 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 7375 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318-2 chr16 23319588 23320024 + 0.734130039933318 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 29336 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318-3 chr2 103073764 103074210 + 0.734130039933318 NA promoter-TSS (NM_175094) promoter-TSS (NM_175094) 312 NM_019735 56369 Mm.24772 NM_019735 ENSMUSG00000010911 Apip APIP2|CGI-29|Mmrp19 APAF1 interacting protein protein-coding common_peak1_29_36_-0.578920820429821_4.91999295541404_0.734130039933318-2 chr19 6255242 6255590 + 0.734130039933318 NA exon (NM_194348, exon 27 of 40) exon (NM_194348, exon 27 of 40) -9227 NR_029830 723957 NR_029830 ENSMUSG00000065582 Mir194-2 Mirn194-2|mir-194-2 microRNA 194-2 ncRNA unique_peak2_29_36_-0.578920820429821_4.91999295541404_0.734130039933318 chr10 17100587 17101383 + 0.734130039933318 NA Intergenic Intergenic -5203 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_29_36_-0.578920820429821_4.91999295541404_0.734130039933318 chr12 99336367 99336683 + 0.734130039933318 NA intron (NM_183186, intron 3 of 5) intron (NM_183186, intron 3 of 5) 113549 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318 chr14 9459193 9459543 + 0.734130039933318 NA Intergenic Intergenic -424727 NR_030680 100042415 Mm.235938 NR_030680 ENSMUSG00000089686 Mnd1-ps Gm3833 Mnd1 retrotransposed pseudogene pseudo common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318-3 chr6 142756736 142757070 + 0.734130039933318 NA exon (NM_009908, exon 1 of 8) exon (NM_009908, exon 1 of 8) 217 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak2_29_36_-0.578920820429821_4.91999295541404_0.734130039933318-2 chr18 32444101 32444671 + 0.734130039933318 NA Intergenic Intergenic -66102 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318-2 chr19 56022206 56022899 + 0.734130039933318 NA Intergenic Intergenic 127231 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318-5 chr7 128529473 128529881 + 0.734130039933318 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 6094 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318 chr14 118938083 118938428 + 0.734130039933318 NA intron (NM_008929, intron 1 of 11) CpG 323 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318-6 chr7 131362339 131362644 + 0.734130039933318 NA intron (NR_152380, intron 1 of 5) CpG 235 NM_026655 68277 Mm.121122 NM_026655 ENSMUSG00000040177 2310057M21Rik 3110040E10Rik|AI429544 RIKEN cDNA 2310057M21 gene protein-coding common_peak2_29_36_-0.578920820429821_4.91999295541404_0.734130039933318 chr10 76961225 76961817 + 0.734130039933318 NA intron (NM_001347216, intron 1 of 15) intron (NM_001347216, intron 1 of 15) 426 NM_001347216 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318-4 chr7 25221451 25221799 + 0.734130039933318 NA intron (NM_175436, intron 1 of 2) intron (NM_175436, intron 1 of 2) 200 NM_175436 210172 Mm.129371 NM_175436 ENSMUSG00000046541 Zfp526 D030024H03Rik|Znf526 zinc finger protein 526 protein-coding common_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318 chr10 93425235 93425741 + 0.734130039933318 NA Intergenic Intergenic -7619 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318-3 chr7 30649904 30650130 + 0.734130039933318 NA exon (NM_133693, exon 1 of 10) exon (NM_133693, exon 1 of 10) 211 NM_133693 68035 Mm.401747 NM_133693 ENSMUSG00000036733 Rbm42 1700003D06Rik|3100004P22Rik RNA binding motif protein 42 protein-coding common_peak2_43_25_0.478735684455969_4.93980756036908_0.734130039933318-7 chrX 139997764 139998267 + 0.734130039933318 NA intron (NM_001172147, intron 1 of 7) intron (NM_001172147, intron 1 of 7) 580 NM_153586 237073 Mm.256670 NM_153586 ENSMUSG00000031433 Rbm41 BB131279|D330023I21Rik RNA binding motif protein 41 protein-coding common_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318-4 chr9 114025975 114026572 + 0.734130039933318 NA intron (NM_178624, intron 1 of 14) intron (NM_178624, intron 1 of 14) 478 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding unique_peak2_29_36_-0.578920820429821_4.91999295541404_0.734130039933318-2 chr17 35162787 35163637 + 0.734130039933318 NA intron (NM_001199044, intron 1 of 30) intron (NM_001199044, intron 1 of 30) 1665 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_29_36_-0.578920820429821_4.91999295541404_0.734130039933318-3 chr2 180025048 180025416 + 0.734130039933318 NA exon (NM_177727, exon 1 of 9) exon (NM_177727, exon 1 of 9) 245 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding unique_peak1_43_25_0.478735684455969_4.93980756036908_0.734130039933318-2 chr7 29155650 29156098 + 0.734130039933318 NA intron (NM_001146023, intron 2 of 7) CpG-12933 336 NM_001146023 73833 Mm.260890 NM_028661 ENSMUSG00000030590 Fam98c 1110006G06Rik|AI836081|AV026483|B230110F21Rik family with sequence similarity 98, member C protein-coding common_peak1_335_241_0.172506520025051_8.00511649728712_0.733914506048303 chr11 5098056 5100486 + 0.733914506048303 NA promoter-TSS (NM_001283063) promoter-TSS (NM_001283063) -2 NM_001290492 279766 Mm.260866 NM_177370 ENSMUSG00000034175 Rhbdd3 Ptag rhomboid domain containing 3 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-7 chr4 53011862 53012118 + 0.73354163167379 NA exon (NM_001347099, exon 1 of 5) exon (NM_001347099, exon 1 of 5) 110 NM_025623 66536 Mm.38244 NM_025623 ENSMUSG00000015247 Nipsnap3b 2700063N13Rik|Nipsnap3a nipsnap homolog 3B protein-coding unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-6 chr2 168115247 168115523 + 0.73354163167379 NA Intergenic Intergenic 34381 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-9 chr5 34525915 34526184 + 0.73354163167379 NA intron (NM_011893, intron 1 of 12) CpG 265 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379 chr1 77536256 77536746 + 0.73354163167379 NA Intergenic Intergenic -21413 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-2 chr1 182502932 182503516 + 0.73354163167379 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 14386 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-2 chr2 85246165 85246454 + 0.73354163167379 NA Intergenic Intergenic -49610 NM_001033346 241528 Mm.291095 NM_001033346 ENSMUSG00000075224 Lrrc55 A330097E02Rik|Gm351 leucine rich repeat containing 55 protein-coding unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-7 chr6 91385278 91385998 + 0.73354163167379 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 25731 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-5 chr2 5950512 5950831 + 0.73354163167379 NA promoter-TSS (NM_001081132) promoter-TSS (NM_001081132) -798 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak1_18_25_-0.7242212840227_4.33832907612974_0.73354163167379 chr17 62879762 62880115 + 0.73354163167379 NA intron (NM_010109, intron 1 of 3) intron (NM_010109, intron 1 of 3) 1379 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-4 chr18 84087096 84087442 + 0.73354163167379 NA promoter-TSS (NM_001081300) promoter-TSS (NM_001081300) -707 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-11 chrX 169358480 169358856 + 0.73354163167379 NA intron (NM_001361166, intron 4 of 5) intron (NM_001361166, intron 4 of 5) 38273 NM_001361166 101055907 NM_001361166 Gm15246 - predicted gene 15246 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-6 chr2 180218854 180219401 + 0.73354163167379 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 6732 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-3 chr17 88066538 88067057 + 0.73354163167379 NA Intergenic Intergenic -1506 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-8 chr4 89505490 89506018 + 0.73354163167379 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -182444 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379 chr11 16829856 16830094 + 0.73354163167379 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 77772 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-4 chr19 9064552 9064902 + 0.73354163167379 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 23229 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-3 chr11 26387219 26387449 + 0.73354163167379 NA intron (NM_001277273, intron 1 of 13) CpG 250 NR_102382 67030 Mm.18875 NM_025923 ENSMUSG00000004018 Fancl 2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd Fanconi anemia, complementation group L protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-10 chr5 66604010 66604433 + 0.73354163167379 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 14596 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-2 chr16 55538083 55538737 + 0.73354163167379 NA Intergenic Intergenic 43679 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_18_25_-0.7242212840227_4.33832907612974_0.73354163167379-5 chr2 110191891 110192369 + 0.73354163167379 NA Intergenic Intergenic 113595 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-2 chr16 91931292 91931561 + 0.733541631673787 NA intron (NM_138597, intron 1 of 6) CpG 204 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-9 chr6 55174539 55174952 + 0.733541631673787 NA intron (NM_009349, intron 1 of 2) intron (NM_009349, intron 1 of 2) 245 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-11 chr9 107887892 107888418 + 0.733541631673787 NA promoter-TSS (NM_028369) promoter-TSS (NM_028369) 26 NM_028369 72825 Mm.38037 NM_028369 ENSMUSG00000032583 Mon1a 2810468K17Rik MON1 homolog A, secretory traffciking associated protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-4 chr15 38050380 38050699 + 0.733541631673787 NA intron (NM_001112721, intron 1 of 58) intron (NM_001112721, intron 1 of 58) 28315 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-6 chr4 133132134 133132591 + 0.733541631673787 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) 1729 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-8 chr5 130002550 130002862 + 0.733541631673787 NA exon (NM_010368, exon 1 of 12) exon (NM_010368, exon 1 of 12) 343 NM_010368 110006 Mm.3317 NM_010368 ENSMUSG00000025534 Gusb AI747421|Gur|Gus|Gus-r|Gus-s|Gus-t|Gus-u|Gut|asd|g glucuronidase, beta protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-10 chr6 137784310 137784964 + 0.733541631673787 NA intron (NM_172733, intron 5 of 8) intron (NM_172733, intron 5 of 8) 30060 NM_172733 232449 Mm.29181 NM_172733 ENSMUSG00000030225 Dera 2010002D22Rik|2500002K03Rik|DEOC deoxyribose-phosphate aldolase (putative) protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-3 chr17 70989725 70990035 + 0.733541631673787 NA intron (NM_023402, intron 1 of 3) intron (NM_023402, intron 1 of 3) 636 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-4 chr2 167541210 167541723 + 0.733541631673787 NA intron (NM_011427, intron 2 of 2) intron (NM_011427, intron 2 of 2) 3271 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-8 chr5 115068169 115068530 + 0.733541631673787 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 39613 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding common_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787-6 chr6 124663174 124663607 + 0.733541631673787 NA intron (NR_149320, intron 1 of 11) intron (NR_149320, intron 1 of 11) 286 NM_145130 14792 Mm.273915 NM_145130 ENSMUSG00000004270 Lpcat3 C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG lysophosphatidylcholine acyltransferase 3 protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-7 chr4 155128716 155129295 + 0.733541631673787 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 42401 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding common_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787-5 chr5 142894996 142895394 + 0.733541631673787 NA promoter-TSS (NM_001033312) promoter-TSS (NM_001033312) 43 NM_001033312 231863 Mm.89753 NM_001033312 ENSMUSG00000066640 Fbxl18 AI427077|B130019G13Rik|C330021B20Rik F-box and leucine-rich repeat protein 18 protein-coding common_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787 chr14 21593519 21593871 + 0.733541631673787 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 93910 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-3 chr12 79611448 79611860 + 0.733541631673787 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 313079 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-5 chr16 24506626 24507259 + 0.733541631673787 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -22372 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787-4 chr2 129066037 129066381 + 0.733541631673787 NA exon (NM_027192, exon 1 of 7) exon (NM_027192, exon 1 of 7) 262 NM_027192 69737 Mm.33909 NM_027192 ENSMUSG00000027394 Ttl 2410003M22Rik|2700049H19Rik|AI848570 tubulin tyrosine ligase protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-9 chr7 4813061 4813296 + 0.733541631673787 NA promoter-TSS (NM_133777) promoter-TSS (NM_133777) -838 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding unique_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787 chr3 122515932 122516199 + 0.733541631673787 NA intron (NM_013867, intron 7 of 11) intron (NM_013867, intron 7 of 11) 25616 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787 chr11 98934252 98934863 + 0.733541631673787 NA Intergenic B1F1|SINE|Alu -3139 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787 chr1 135169537 135169929 + 0.733541631673787 NA Intergenic Intergenic -2052 NM_134438 171469 Mm.272290 NM_134438 ENSMUSG00000026424 Gpr37l1 AW047233|CAG-18|D0Kist8 G protein-coupled receptor 37-like 1 protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-2 chr11 103099882 103100385 + 0.733541631673787 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 1525 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-6 chr3 96240581 96240919 + 0.733541631673787 NA promoter-TSS (NM_013549).2 promoter-TSS (NM_013549).2 -376 NM_178212 319192 Mm.5220 NM_178212 ENSMUSG00000063954 Hist2h2aa2 H2a-614|H2a-615 histone cluster 2, H2aa2 protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-11 chr7 74525286 74525703 + 0.733541631673787 NA intron (NM_001038643, intron 1 of 10) intron (NM_001038643, intron 1 of 10) 29286 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787-3 chr19 7302269 7302540 + 0.733541631673787 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -6957 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_29_16_0.54306970394879_4.35899769322473_0.733541631673787-2 chr19 6335351 6335624 + 0.733541631673787 NA exon (NM_001168488, exon 2 of 10) exon (NM_001168488, exon 2 of 10) 448 NM_008583 17283 Mm.12917 NM_008583 ENSMUSG00000024947 Men1 AW045611 multiple endocrine neoplasia 1 protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-5 chr2 167553596 167553925 + 0.733541631673787 NA Intergenic B1_Mus1|SINE|Alu 15565 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-10 chr7 43482279 43482544 + 0.733541631673787 NA intron (NM_001164518, intron 1 of 7) intron (NM_001164518, intron 1 of 7) 7612 NM_001164518 210094 Mm.228087 NM_001164518 ENSMUSG00000013367 Iglon5 A230106M20Rik|Gm1431 IgLON family member 5 protein-coding unique_peak1_29_16_0.54306970394879_4.35899769322473_0.733541631673787-7 chr4 134238006 134238459 + 0.733541631673787 NA intron (NM_001081047, intron 1 of 20) intron (NM_001081047, intron 1 of 20) 167 NM_001081047 194231 Mm.331958 NM_001081047 ENSMUSG00000028841 Cnksr1 BC037758 connector enhancer of kinase suppressor of Ras 1 protein-coding common_peak1_241_170_0.203403266517182_7.51955414814449_0.732756011968719 chr15 89354969 89356856 + 0.732756011968719 NA promoter-TSS (NM_178919) promoter-TSS (NM_178919) 193 NM_001271601 52683 Mm.143167 NM_001115132 ENSMUSG00000008690 Ncaph2 - non-SMC condensin II complex, subunit H2 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-56 chr8 35610478 35610854 + 0.732381977911291 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -21646 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-17 chr3 27565668 27566037 + 0.732381977911291 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) 19143 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-41 chr4 14857622 14857909 + 0.732381977911291 NA Intergenic Intergenic -6454 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360|Pip4p2 transmembrane protein 55A protein-coding unique_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291 chr3 27665187 27665465 + 0.732381977911291 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 45126 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-37 chr3 58692652 58692914 + 0.732381977911291 NA promoter-TSS (NM_009174) promoter-TSS (NM_009174) 194 NR_045167 71301 Mm.254475 NR_045167 ENSMUSG00000097725 4930593A02Rik 4933440I01Rik RIKEN cDNA 4930593A02 gene ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-7 chr11 21224273 21224473 + 0.732381977911291 NA Intergenic Intergenic -14659 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-21 chr4 55775491 55776027 + 0.732381977911291 NA Intergenic Intergenic -243284 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-14 chr13 32132878 32133116 + 0.732381977911291 NA intron (NM_146041, intron 4 of 10) intron (NM_146041, intron 4 of 10) 205547 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-13 chr15 80000987 80001410 + 0.732381977911291 NA intron (NM_011057, intron 4 of 6) intron (NM_011057, intron 4 of 6) -2172 NR_106072 102465699 NR_106072 ENSMUSG00000099222 Mir7213 Gm27377|mmu-mir-7213 microRNA 7213 ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-59 chr9 18293299 18293758 + 0.732381977911291 NA intron (NM_025844, intron 1 of 10) intron (NM_025844, intron 1 of 10) 1261 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding unique_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-2 chr6 127331943 127332159 + 0.732381977911291 NA Intergenic Intergenic -24084 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-10 chr4 9074702 9074908 + 0.732381977911291 NA Intergenic Intergenic -194488 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-19 chr14 45494772 45495204 + 0.732381977911291 NA intron (NM_146054, intron 3 of 14) HAL1|LINE|L1 35077 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-20 chr3 159913050 159913306 + 0.732381977911291 NA intron (NM_001356350, intron 8 of 12) intron (NM_001356350, intron 8 of 12) 73528 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-21 chr15 27467793 27468062 + 0.732381977911291 NA intron (NM_020332, intron 1 of 11) intron (NM_020332, intron 1 of 11) 1250 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-44 chr4 117122461 117122741 + 0.732381977911291 NA intron (NR_024078, intron 3 of 6) intron (NR_024078, intron 3 of 6) 3124 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-7 chr12 27983161 27983537 + 0.732381977911291 NA Intergenic Intergenic 564988 NM_001177964 68511 Mm.310284 NM_001177964 ENSMUSG00000020633 Dcdc2c 1110015M06Rik doublecortin domain containing 2C protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-11 chr15 6280135 6280532 + 0.732381977911291 NA Intergenic Intergenic -19456 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-24 chr8 46866958 46867196 + 0.732381977911291 NA Intergenic Intergenic -119810 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-15 chr13 63568210 63568426 + 0.732381977911291 NA intron (NM_001328514, intron 1 of 23) CpG -2583 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-13 chr6 91369264 91369611 + 0.732381977911291 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 41932 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-6 chr15 63411709 63411928 + 0.732381977911291 NA Intergenic Intergenic 67790 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-9 chr3 122480497 122480705 + 0.732381977911291 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -2968 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-5 chr13 45924990 45925201 + 0.732381977911291 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 39896 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-13 chr12 7966519 7966784 + 0.732381977911291 NA Intergenic Intergenic -11026 NM_009693 238055 Mm.221239 NM_009693 ENSMUSG00000020609 Apob AI315052|Apo B-100|apob-100|apob-48 apolipoprotein B protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-22 chr5 86541023 86541412 + 0.732381977911291 NA intron (NM_178730, intron 4 of 10) intron (NM_178730, intron 4 of 10) -22617 NM_177162 320454 Mm.184522 NM_177162 ENSMUSG00000079451 Tmprss11g 9930032O22Rik|Desc4 transmembrane protease, serine 11g protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-16 chr7 35754203 35754416 + 0.732381977911291 NA 5' UTR (NM_178704, exon 1 of 19) 5' UTR (NM_178704, exon 1 of 19) 145 NM_178704 233115 Mm.257808 NM_178704 ENSMUSG00000043671 Dpy19l3 6030410G08|9330164H19Rik dpy-19-like 3 (C. elegans) protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-26 chr17 85090854 85091140 + 0.732381977911291 NA promoter-TSS (NM_001163624) promoter-TSS (NM_001163624) 297 NM_028576 73582 Mm.260753 NM_028576 ENSMUSG00000071037 Camkmt 1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT calmodulin-lysine N-methyltransferase protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-40 chr3 144720701 144720919 + 0.732381977911291 NA promoter-TSS (NM_001282042) promoter-TSS (NM_001282042) -475 NM_001282037 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-5 chr2 152789078 152789281 + 0.732381977911291 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 35006 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit 4I2 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291 chr1 106172986 106173180 + 0.732381977911291 NA exon (NM_133821, exon 1 of 17) exon (NM_133821, exon 1 of 17) 1214 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-8 chr11 44729564 44729896 + 0.732381977911291 NA intron (NM_001290709, intron 6 of 15) intron (NM_001290709, intron 6 of 15) 111630 NM_001290710 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-33 chr2 71367295 71367491 + 0.732381977911291 NA intron (NM_172436, intron 1 of 17) intron (NM_172436, intron 1 of 17) 161 NM_172436 78830 Mm.30928 NM_172436 ENSMUSG00000027010 Slc25a12 2610002D09Rik|AI839531|B230107K20Rik|BB129864 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-47 chr5 24266580 24266771 + 0.732381977911291 NA Intergenic Intergenic 9147 NR_030454 735274 NR_030454 ENSMUSG00000106252 Mir684-1 Mirn684-1 microRNA 684-1 ncRNA unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-16 chr2 145904043 145904327 + 0.732381977911291 NA intron (NM_026425, intron 1 of 5) intron (NM_026425, intron 1 of 5) 944 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-35 chr2 152929199 152929460 + 0.732381977911291 NA Intergenic Intergenic 3879 NM_010226 14239 Mm.205798 NM_010226 ENSMUSG00000074676 Foxs1 FREAC10|Fkh3|Fkhl18 forkhead box S1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-52 chr7 66368652 66369049 + 0.732381977911291 NA intron (NM_146191, intron 2 of 33) L1M5|LINE|L1 12874 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-12 chr15 27943744 27943955 + 0.732381977911291 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 81999 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-7 chr5 98944270 98944477 + 0.732381977911291 NA intron (NM_008926, intron 15 of 18) MLT1A|LTR|ERVL-MaLR 89958 NM_001310677 110075 Mm.136461 NM_173404 ENSMUSG00000029335 Bmp3 9530029I04Rik bone morphogenetic protein 3 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-9 chr13 63260442 63260805 + 0.732381977911291 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 20594 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-9 chr11 65387233 65387449 + 0.732381977911291 NA Intergenic Intergenic -99508 NR_040280 327946 Mm.383301 NR_040280 ENSMUSG00000085162 Gm12295 A730013G04 predicted gene 12295 ncRNA common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-8 chr19 28287613 28287835 + 0.732381977911291 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -276558 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-4 chr13 49321895 49322092 + 0.732381977911291 NA Intergenic Intergenic -12785 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-15 chr7 34130725 34130944 + 0.732381977911291 NA intron (NM_207212, intron 1 of 7) intron (NM_207212, intron 1 of 7) 2434 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-48 chr5 125083085 125083293 + 0.732381977911291 NA intron (NM_011424, intron 12 of 46) intron (NM_011424, intron 12 of 46) 79714 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-54 chr7 80776138 80776646 + 0.732381977911291 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 26939 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-15 chr2 25574302 25574543 + 0.732381977911291 NA TTS (NM_001005424) TTS (NM_001005424) 449 NM_029293 75454 Mm.458079 NM_029293 ENSMUSG00000036504 Phpt1 1700008C22Rik|PHP|Php14 phosphohistidine phosphatase 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-17 chr13 108263516 108263875 + 0.732381977911291 NA intron (NM_029001, intron 2 of 7) intron (NM_029001, intron 2 of 7) 49291 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-23 chr17 27145810 27146107 + 0.732381977911291 NA intron (NM_173027, intron 5 of 5) intron (NM_173027, intron 5 of 5) -12067 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-2 chr10 17261132 17261446 + 0.732381977911291 NA Intergenic Intergenic -165507 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-3 chr12 113150394 113150601 + 0.732381977911291 NA Intergenic Intergenic -1515 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-18 chr8 36638219 36638466 + 0.732381977911291 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -24399 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-60 chrX 101418758 101419197 + 0.732381977911291 NA intron (NM_001177987, intron 1 of 6) intron (NM_001177987, intron 1 of 6) 937 NM_001177986 56364 Mm.23458 NM_019831 ENSMUSG00000031310 Zmym3 9030216B10Rik|AW122925|DXS6673El|Zfp261 zinc finger, MYM-type 3 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-57 chr8 81867443 81867685 + 0.732381977911291 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 525002 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-45 chr4 118360072 118360319 + 0.732381977911291 NA exon (NM_026601, exon 1 of 9) exon (NM_026601, exon 1 of 9) 196 NR_003946 68180 Mm.193212 NM_026601 ENSMUSG00000006395 Hyi 2700033B16Rik|6430559E15Rik|HT036 hydroxypyruvate isomerase (putative) protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-12 chrX 140521962 140522227 + 0.732381977911291 NA Intergenic Intergenic 20574 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-3 chr14 70074392 70074606 + 0.732381977911291 NA Intergenic Intergenic -2946 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-20 chr15 3434741 3435117 + 0.732381977911291 NA intron (NM_001048178, intron 2 of 8) intron (NM_001048178, intron 2 of 8) -131403 NM_001357801 100039139 Mm.455610 NM_001166063 ENSMUSG00000091119 Ccdc152 - coiled-coil domain containing 152 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-14 chr16 85132305 85132596 + 0.732381977911291 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 41257 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-2 chr1 191663267 191663722 + 0.732381977911291 NA Intergenic Intergenic -54530 NM_172266 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-4 chr10 80777436 80777877 + 0.732381977911291 NA intron (NM_199322, intron 8 of 27) intron (NM_199322, intron 8 of 27) 20970 NM_023900 78670 Mm.41479 NM_023900 ENSMUSG00000035278 Plekhj1 9530063M10Rik pleckstrin homology domain containing, family J member 1 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291 chr1 91056690 91057020 + 0.732381977911291 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 3411 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291 chr10 4274337 4274576 + 0.732381977911291 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 8127 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-5 chr14 21848571 21848782 + 0.732381977911291 NA 5' UTR (NM_176925, exon 1 of 3) 5' UTR (NM_176925, exon 1 of 3) 234 NM_026965 69156 Mm.11827 NM_026965 ENSMUSG00000021773 Comtd1 1810030M08Rik|MT773 catechol-O-methyltransferase domain containing 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-34 chr2 84543852 84544187 + 0.732381977911291 NA Intergenic Intergenic -37146 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-25 chr17 31309396 31309595 + 0.732381977911291 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 13271 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-4 chr10 80107304 80107535 + 0.732381977911291 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -4717 NM_001359637 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-9 chr3 38143249 38143479 + 0.732381977911291 NA Intergenic Intergenic 64755 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-6 chr17 6655525 6655739 + 0.732381977911291 NA intron (NM_001166630, intron 1 of 4).2 CpG 199 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-38 chr3 107964910 107965224 + 0.732381977911291 NA intron (NM_010359, intron 7 of 7) intron (NM_010359, intron 7 of 7) 4107 NM_010359 14864 Mm.440885 NM_010359 ENSMUSG00000004038 Gstm3 Fsc2|mGSTM5 glutathione S-transferase, mu 3 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-2 chr1 156069987 156070218 + 0.732381977911291 NA Intergenic Intergenic 29241 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-17 chr7 65369317 65369728 + 0.732381977911291 NA intron (NM_009386, intron 1 of 27) intron (NM_009386, intron 1 of 27) 1722 NM_001163574 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-30 chr19 28181032 28181397 + 0.732381977911291 NA Intergenic Intergenic -170048 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-3 chr8 11265346 11265544 + 0.732381977911291 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -47360 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-3 chr10 77975410 77975626 + 0.732381977911291 NA Intergenic Intergenic -3132 NM_026431 67884 Mm.297512 NM_026431 ENSMUSG00000020284 1810043G02Rik AV026620|D10Jhu13e RIKEN cDNA 1810043G02 gene protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-2 chr12 29958270 29958522 + 0.732381977911291 NA intron (NM_181395, intron 1 of 22) intron (NM_181395, intron 1 of 22) 20360 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-50 chr7 28436790 28436986 + 0.732381977911291 NA promoter-TSS (NM_022024) promoter-TSS (NM_022024) -559 NM_022024 63986 Mm.194536 NM_022024 ENSMUSG00000060791 Gmfg 0610039G16Rik|2310057N07Rik|AI324845 glia maturation factor, gamma protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-28 chr19 11618341 11618604 + 0.732381977911291 NA exon (NM_001276330, exon 6 of 7) exon (NM_001276330, exon 6 of 7) 5247 NM_001276330 14126 Mm.329735 NM_013516 ENSMUSG00000024680 Ms4a2 FcRB|Fce1b|Fcer1b|Fcrbeta|Ms4a1|fcERI membrane-spanning 4-domains, subfamily A, member 2 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-36 chr3 15217142 15217578 + 0.732381977911291 NA Intergenic Intergenic 114942 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-3 chr10 59515975 59516237 + 0.732381977911291 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) -74327 NM_010959 18302 Mm.123013 NM_010959 ENSMUSG00000009654 Oit3 EF-9|LZP oncoprotein induced transcript 3 protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-4 chr13 27735040 27735350 + 0.732381977911291 NA Intergenic AT_rich|Low_complexity|Low_complexity -18458 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-10 chr7 49331965 49332279 + 0.732381977911291 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 85933 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-53 chr7 66379241 66379480 + 0.732381977911291 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 2364 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_10_16_-0.89417747950679_3.64037410149694_0.732381977911291 chr11 77766356 77766582 + 0.732381977911291 NA Intergenic Intergenic -10766 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-4 chr9 9093731 9094026 + 0.732381977911291 NA intron (NM_027823, intron 4 of 22) intron (NM_027823, intron 4 of 22) -142410 NR_045754 100579151 Mm.412450 NR_045754 ENSMUSG00000085253 Gm16833 - predicted gene, 16833 ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-58 chr8 124340264 124340459 + 0.732381977911291 NA intron (NM_139272, intron 14 of 15) intron (NM_139272, intron 14 of 15) 93575 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-49 chr5 146299260 146299504 + 0.732381977911291 NA intron (NM_153599, intron 10 of 12) intron (NM_153599, intron 10 of 12) 68132 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291 chr1 73963431 73963671 + 0.732381977911291 NA intron (NM_001289895, intron 18 of 32) intron (NM_001289895, intron 18 of 32) -99085 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-3 chr10 60533272 60533549 + 0.732381977911291 NA intron (NM_001252635, intron 8 of 68) intron (NM_001252635, intron 8 of 68) 133684 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-12 chr6 48048417 48048619 + 0.732381977911291 NA promoter-TSS (NM_001347139) promoter-TSS (NM_001347139) -404 NM_001081382 72306 Mm.381553 NM_001081382 ENSMUSG00000071477 Zfp777 2500002G23Rik zinc finger protein 777 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-7 chr19 17387419 17387733 + 0.732381977911291 NA Intergenic Intergenic -6467 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-10 chr13 97310774 97311088 + 0.732381977911291 NA Intergenic Intergenic 69826 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-18 chr13 116527353 116527581 + 0.732381977911291 NA Intergenic Intergenic -217779 NM_021459 16392 Mm.42242 NM_021459 ENSMUSG00000042258 Isl1 - ISL1 transcription factor, LIM/homeodomain protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-22 chr16 24419960 24420307 + 0.732381977911291 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -26478 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-55 chr8 33906178 33906384 + 0.732381977911291 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 23582 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-29 chr19 25036900 25037239 + 0.732381977911291 NA intron (NM_028785, intron 1 of 47) intron (NM_028785, intron 1 of 47) 37540 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-16 chr13 108240850 108241196 + 0.732381977911291 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 26619 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-23 chr7 80056814 80057094 + 0.732381977911291 NA intron (NM_175433, intron 1 of 4) intron (NM_175433, intron 1 of 4) 18303 NR_045695 100859962 Mm.392575 NR_045695 ENSMUSG00000108714 Gm21057 - predicted gene, 21057 ncRNA common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-11 chr8 122056256 122056551 + 0.732381977911291 NA Intergenic Intergenic 78379 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-19 chr9 63657128 63657355 + 0.732381977911291 NA intron (NM_016769, intron 5 of 8) intron (NM_016769, intron 5 of 8) 54595 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-19 chr3 145805353 145805817 + 0.732381977911291 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 46893 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-27 chr19 8707023 8707291 + 0.732381977911291 NA 3' UTR (NM_008577, exon 9 of 9) 3' UTR (NM_008577, exon 9 of 9) 6740 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-43 chr4 45473545 45473871 + 0.732381977911291 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 57120 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-2 chr12 103683031 103683236 + 0.732381977911291 NA Intergenic Intergenic -6371 NM_001310472 194604 NM_001310472 ENSMUSG00000071179 Serpina16 Gm46 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-6 chr11 95069650 95069910 + 0.732381977911291 NA promoter-TSS (NM_001306071) promoter-TSS (NM_001306071) -582 NM_001306071 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-4 chr2 91258117 91258369 + 0.732381977911291 NA intron (NM_028733, intron 1 of 10) intron (NM_028733, intron 1 of 10) 914 NM_028733 80708 Mm.236650 NM_028733 ENSMUSG00000027257 Pacsin3 4921507A02Rik|6330413E15Rik|AW413130 protein kinase C and casein kinase substrate in neurons 3 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-32 chr2 28517706 28517972 + 0.732381977911291 NA intron (NM_009058, intron 1 of 17) intron (NM_009058, intron 1 of 17) 4672 NM_001145834 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-46 chr4 130108608 130108946 + 0.732381977911291 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 1221 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-12 chr11 119855135 119855441 + 0.732381977911291 NA intron (NM_028898, intron 17 of 33) intron (NM_028898, intron 17 of 33) -20923 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-5 chr10 94148625 94148926 + 0.732381977911291 NA intron (NM_011629, intron 1 of 13) intron (NM_011629, intron 1 of 13) 844 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-5 chr10 81571250 81571548 + 0.732381977911291 NA Intergenic Intergenic -3888 NM_019725 21886 Mm.38608 NM_019725 ENSMUSG00000034771 Tle2 Grg2|mKIAA4188 transducin-like enhancer of split 2 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-10 chr11 98786231 98786584 + 0.732381977911291 NA Intergenic Intergenic -9109 NM_001361931 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male specific lethal 1 protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-11 chr4 136436718 136436946 + 0.732381977911291 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 12220 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-25 chr8 122529130 122529543 + 0.732381977911291 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 21993 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-24 chr17 29447147 29447470 + 0.732381977911291 NA Intergenic Intergenic -43737 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-18 chr3 38045695 38045898 + 0.732381977911291 NA Intergenic Intergenic 146983 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-8 chr2 180170845 180171113 + 0.732381977911291 NA promoter-TSS (NM_019822) promoter-TSS (NM_019822) -609 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding unique_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-8 chr12 86079309 86079534 + 0.732381977911291 NA promoter-TSS (NM_009368) promoter-TSS (NM_009368) -380 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-6 chr10 128821090 128821533 + 0.732381977911291 NA promoter-TSS (NR_153109) promoter-TSS (NR_153109) 318 NM_001359170 66844 Mm.235562 NM_024180 ENSMUSG00000025353 Ormdl2 0610012C09Rik ORM1-like 2 (S. cerevisiae) protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-7 chr17 34198427 34198822 + 0.732381977911291 NA intron (NM_010724, intron 1 of 5) intron (NM_010724, intron 1 of 5) 429 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-39 chr3 137933284 137933647 + 0.732381977911291 NA intron (NM_011932, intron 8 of 8) intron (NM_011932, intron 8 of 8) 14910 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291-6 chr3 146568211 146568474 + 0.732381977911291 NA Intergenic Intergenic -28807 NM_009474 22262 Mm.10865 NM_009474 ENSMUSG00000028186 Uox AI663847 urate oxidase protein-coding common_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-14 chr6 125131377 125131737 + 0.732381977911291 NA promoter-TSS (NM_138747) promoter-TSS (NM_138747) -326 NM_138747 110109 Mm.29203 NM_138747 ENSMUSG00000038279 Nop2 120kDa|A530002O17|Nol1 NOP2 nucleolar protein protein-coding common_peak2_18_9_0.65429033923103_3.64907326450288_0.732381977911291 chr11 104550838 104551064 + 0.732381977911291 NA promoter-TSS (NM_001285990) promoter-TSS (NM_001285990) 288 NM_010858 17896 Mm.390355 NM_010858 ENSMUSG00000061086 Myl4 ALC1|AMLC|ELC|ELC1a|GT1|MLC1EMB|MLC1a|Myla myosin, light polypeptide 4 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-31 chr2 19685978 19686296 + 0.732381977911291 NA Intergenic Intergenic 28075 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-42 chr4 40908304 40908679 + 0.732381977911291 NA Intergenic Intergenic -11565 NM_011463 20731 Mm.25246 NM_011463 ENSMUSG00000028415 Spink4 MPGC60 serine peptidase inhibitor, Kazal type 4 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-11 chr11 116617887 116618099 + 0.732381977911291 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 6259 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_10_16_-0.89417747950679_3.64037410149694_0.732381977911291-2 chr11 99385384 99385644 + 0.732381977911291 NA 3' UTR (NM_010660, exon 8 of 8) 3' UTR (NM_010660, exon 8 of 8) 3850 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding unique_peak1_18_9_0.65429033923103_3.64907326450288_0.732381977911291-51 chr7 44554103 44554370 + 0.732381977911291 NA promoter-TSS (NM_001285519) promoter-TSS (NM_001285519) -271 NM_001285517 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak1_135_133_-0.270368292267809_6.93090504432387_0.732350204966747 chr5 113907279 113908629 + 0.732350204966747 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 752 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_162_111_0.24778806766682_6.93124895589101_0.732350204966747 chr10 86171590 86173305 + 0.732350204966747 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 76593 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_177_170_-0.236600268059215_7.29955238085629_0.732331144471833 chr14 33319635 33321296 + 0.732331144471833 NA intron (NM_153800, intron 4 of 10) CpG 90559 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_177_122_0.238737741487443_7.06188337608296_0.731791719995959 chr19 9073450 9074966 + 0.731791719995959 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 13748 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_148_101_0.254072054553771_6.79946136924838_0.731092663358121 chr15 85336335 85337263 + 0.731092663358121 NA intron (NM_016843, intron 1 of 11) CpG 418 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding common_peak2_149_101_0.263654142835024_6.80425241338901_0.731092663358121 chr15 102670114 102671037 + 0.731092663358121 NA intron (NM_026468, intron 1 of 4) intron (NM_026468, intron 1 of 4) 472 NM_026468 67942 Mm.10314 NM_026468 ENSMUSG00000062683 Atp5g2 1810041M08Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) protein-coding common_peak2_123_122_-0.279119945359702_6.80295453265939_0.731092663358097 chr8 106892213 106893423 + 0.731092663358097 NA promoter-TSS (NM_011574) promoter-TSS (NM_011574) 775 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding common_peak1_122_122_-0.290719335511347_6.79715483758357_0.731092663358097 chr13 28544801 28546083 + 0.731092663358097 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 165431 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_122_122_-0.290719335511347_6.79715483758357_0.731092663358097-2 chr18 80555065 80556146 + 0.731092663358097 NA Intergenic Intergenic -11059 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_110_73_0.295287998082703_6.3570973646703_0.73089369474718 chr11 115964183 115965751 + 0.73089369474718 NA 3' UTR (NM_020483, exon 11 of 11) 3' UTR (NM_020483, exon 11 of 11) -9758 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak2_88_91_-0.335254729657086_6.35593459122847_0.73089369474718-2 chr2 26932430 26933421 + 0.73089369474718 NA intron (NM_011512, intron 1 of 5) intron (NM_011512, intron 1 of 5) 586 NM_011512 20932 Mm.300594 NM_011512 ENSMUSG00000014867 Surf4 AL033340|AL033373|Surf-4 surfeit gene 4 protein-coding common_peak2_88_91_-0.335254729657086_6.35593459122847_0.73089369474718 chr16 93149978 93151678 + 0.73089369474718 NA Intergenic Intergenic 202361 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_88_91_-0.335254729657086_6.35593459122847_0.73089369474718 chr19 32291729 32292578 + 0.73089369474718 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 57163 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_88_91_-0.335254729657086_6.35593459122847_0.73089369474718-2 chr5 31201361 31202241 + 0.73089369474718 NA TTS (NM_008014) TTS (NM_008014) 241 NM_001177901 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding common_peak2_193_184_-0.226825885678478_7.41796851767707_0.730659414100901 chr4 120568268 120571045 + 0.730659414100901 NA promoter-TSS (NM_001355491) promoter-TSS (NM_001355491) -197 NM_001355491 51797 Mm.1815 NM_016748 ENSMUSG00000028633 Ctps Ctps1 cytidine 5'-triphosphate synthase protein-coding common_peak1_209_198_-0.218542984916879_7.52735312808521_0.730411831821381 chr1 161248943 161251164 + 0.730411831821381 NA intron (NM_001303408, intron 1 of 5) intron (NM_001303408, intron 1 of 5) 1157 NM_007453 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak1_122_82_0.276755738480968_6.51341730058741_0.730164429015602 chr1 189728311 189729608 + 0.730164429015602 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 691 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak1_122_82_0.276755738480968_6.51341730058741_0.730164429015602-2 chr11 118289202 118290162 + 0.730164429015602 NA intron (NM_001033528, intron 1 of 20) intron (NM_001033528, intron 1 of 20) 562 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak1_123_82_0.288355128632613_6.51921699566323_0.730164429015602 chr9 20897505 20898535 + 0.730164429015602 NA intron (NM_016876, intron 3 of 10) intron (NM_016876, intron 3 of 10) 570 NM_016876 53356 Mm.427309 NM_016876 ENSMUSG00000070319 Eif3g 44kDa|D0Jmb4|Eif3s4|TU-189B2|eIF3-p44|p44 eukaryotic translation initiation factor 3, subunit G protein-coding common_peak2_279_259_-0.192176759202383_7.92627943342726_0.729817785643603 chrX 13279883 13282516 + 0.729817785643603 NA intron (NM_010028, intron 1 of 16) CpG 177 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak1_279_259_-0.192176759202383_7.92627943342726_0.729817785643603 chrX 13279882 13282519 + 0.729817785643603 NA intron (NM_010028, intron 1 of 16) CpG 178 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak2_68_73_-0.385764461605241_6.01657113482633_0.729729194218058-2 chr5 135009179 135010108 + 0.729729194218058 NA non-coding (NR_033794, exon 1 of 5) non-coding (NR_033794, exon 1 of 5) 187 NR_033794 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_68_73_-0.385764461605241_6.01657113482633_0.729729194218058 chr15 34495000 34495853 + 0.729729194218058 NA promoter-TSS (NM_008287) promoter-TSS (NM_008287) 115 NM_152894 67724 Mm.248779 NM_026340 ENSMUSG00000022325 Pop1 4932434G09Rik processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_69_73_-0.365152352656391_6.02687718930075_0.729729194218058 chr12 85599553 85600484 + 0.729729194218058 NA promoter-TSS (NM_001205053) promoter-TSS (NM_001205053) 0 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_88_57_0.330326231272355_6.02314411076375_0.729729194218045 chr1 36368385 36369124 + 0.729729194218045 NA intron (NM_172652, intron 1 of 20) CpG 427 NM_172652 226976 Mm.24734 NM_172652 ENSMUSG00000010453 Kansl3 4632411B12Rik|4932435K23|AI431067|AI647574|C85723|Kiaa1310|mKIAA1310 KAT8 regulatory NSL complex subunit 3 protein-coding common_peak1_88_57_0.330326231272355_6.02314411076375_0.729729194218045-2 chr15 81263808 81264665 + 0.729729194218045 NA Intergenic Intergenic -12374 NR_077230 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak1_209_146_0.218409290790405_7.30887699023157_0.729604319704979 chr19 28560072 28562106 + 0.729604319704979 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -117135 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_261_185_0.195848517761115_7.63708306998859_0.729130871609448 chr18 75341880 75345013 + 0.729130871609448 NA Intergenic CpG 23642 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_99_65_0.31084976322061_6.19981900096876_0.728895227537735 chr11 96269913 96270957 + 0.728895227537735 NA promoter-TSS (NM_008270) promoter-TSS (NM_008270) -895 NM_008270 15417 Mm.258271 NM_008270 ENSMUSG00000020875 Hoxb9 Hox-2.5 homeobox B9 protein-coding common_peak2_99_65_0.31084976322061_6.19981900096876_0.728895227537735 chr14 20733883 20734663 + 0.728895227537735 NA TTS (NM_001039138) TTS (NM_001039138) 289 NM_010811 17423 Mm.4084 NM_010811 ENSMUSG00000039308 Ndst2 Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding common_peak2_78_82_-0.357471765071648_6.1963035488111_0.728895227537735 chr6 67267016 67267794 + 0.728895227537735 NA exon (NM_025814, exon 1 of 8) exon (NM_025814, exon 1 of 8) 426 NM_025814 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding common_peak1_99_65_0.31084976322061_6.19981900096876_0.728895227537735-2 chr6 58846767 58847814 + 0.728895227537735 NA intron (NM_001361966, intron 3 of 25) intron (NM_001361966, intron 3 of 25) 13590 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_163_112_0.243725625612006_6.94204177522119_0.728834101516686-2 chr19 45018393 45019232 + 0.728834101516686 NA intron (NM_001130526, intron 1 of 4) intron (NM_001130526, intron 1 of 4) 677 NM_001130526 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak1_163_112_0.243725625612006_6.94204177522119_0.728834101516686-3 chr9 59484891 59486616 + 0.728834101516686 NA intron (NM_019927, intron 1 of 13) CpG 621 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak1_163_112_0.243725625612006_6.94204177522119_0.728834101516686 chr18 60623120 60624460 + 0.728834101516686 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 515 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_150_146_-0.254074440579325_7.0726351245467_0.728581160200941 chr2 154791132 154792606 + 0.728581160200941 NA intron (NM_001139513, intron 1 of 8) CpG 759 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_150_146_-0.254074440579325_7.0726351245467_0.728581160200941 chr5 142820356 142821634 + 0.728581160200941 NA Intergenic CpG -3608 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-4 chr4 45011511 45012278 + 0.728039925316326 NA 5' UTR (NM_001163284, exon 1 of 2) 5' UTR (NM_001163284, exon 1 of 2) 518 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326 chr13 15804257 15805014 + 0.728039925316326 NA Intergenic Intergenic -2005 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-8 chr9 75037743 75038289 + 0.728039925316326 NA intron (NR_152135, intron 2 of 4) CpG 284 NM_021548 59046 Mm.247837 NM_021548 ENSMUSG00000007656 Arpp19 19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12 cAMP-regulated phosphoprotein 19 protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-5 chr5 151068821 151069525 + 0.728039925316326 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 116566 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding common_peak1_68_43_0.364257285386412_5.6415602613305_0.728039925316326-5 chr19 3638109 3638661 + 0.728039925316326 NA intron (NM_008513, intron 5 of 22) intron (NM_008513, intron 5 of 22) 48179 NM_008513 16973 Mm.274581 NM_008513 ENSMUSG00000024913 Lrp5 BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142 low density lipoprotein receptor-related protein 5 protein-coding common_peak1_68_43_0.364257285386412_5.6415602613305_0.728039925316326-4 chr18 50023430 50024122 + 0.728039925316326 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -7208 NM_001360935 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-6 chr7 144746898 144747750 + 0.728039925316326 NA Intergenic PB1D7|SINE|Alu -8732 NM_001242349 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-2 chr15 31530316 31530948 + 0.728039925316326 NA intron (NM_172606, intron 1 of 25) CpG 405 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-3 chr15 79833312 79834233 + 0.728039925316326 NA intron (NM_001013360, intron 2 of 7) intron (NM_001013360, intron 2 of 7) 561 NM_001013360 504193 Mm.38438 NM_029079 ENSMUSG00000089837 Npcd Cbx6-Nptxr neuronal pentraxin chromo domain protein-coding common_peak2_69_43_0.384869394335261_5.65186631580493_0.728039925316326 chr5 91082572 91083815 + 0.728039925316326 NA intron (NM_007950, intron 1 of 4) intron (NM_007950, intron 1 of 4) 8576 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding common_peak1_68_43_0.364257285386412_5.6415602613305_0.728039925316326-2 chr17 45573527 45574610 + 0.728039925316326 NA promoter-TSS (NM_008302) promoter-TSS (NM_008302) -807 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak1_69_43_0.384869394335261_5.65186631580493_0.728039925316326 chr16 35509314 35510069 + 0.728039925316326 NA promoter-TSS (NR_040481) promoter-TSS (NR_040481) -272 NR_040481 69768 Mm.396136 NR_040481 ENSMUSG00000099429 1600019K03Rik - RIKEN cDNA 1600019K03 gene ncRNA common_peak1_68_43_0.364257285386412_5.6415602613305_0.728039925316326 chr11 106722469 106723462 + 0.728039925316326 NA Intergenic Intergenic -7684 NM_001305157 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_69_43_0.384869394335261_5.65186631580493_0.728039925316326-2 chr5 138994347 138994840 + 0.728039925316326 NA intron (NM_008808, intron 1 of 5) CpG-11694 360 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_68_43_0.364257285386412_5.6415602613305_0.728039925316326-3 chr18 24751507 24752259 + 0.728039925316326 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 43260 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_68_43_0.364257285386412_5.6415602613305_0.728039925316326-6 chr5 118559541 118560116 + 0.728039925316326 NA promoter-TSS (NM_172424) promoter-TSS (NM_172424) -891 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_68_43_0.364257285386412_5.6415602613305_0.728039925316326-7 chr8 113878128 113878665 + 0.728039925316326 NA Intergenic Intergenic -29557 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding common_peak2_69_43_0.384869394335261_5.65186631580493_0.728039925316326-3 chr8 46948474 46948817 + 0.728039925316326 NA Intergenic Intergenic -38242 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_111_112_-0.302589827769752_6.66888404853031_0.727493611084246 chr5 29434479 29435782 + 0.727493611084246 NA exon (NM_001033457, exon 1 of 11) exon (NM_001033457, exon 1 of 11) 463 NM_001033457 433864 Mm.262815 NM_001033457 ENSMUSG00000001569 Nom1 D5Kng1|Gm1040 nucleolar protein with MIF4G domain 1 protein-coding common_peak1_111_112_-0.302589827769752_6.66888404853031_0.727493611084246-2 chr5 32459133 32460330 + 0.727493611084246 NA intron (NM_172707, intron 1 of 7) CpG 761 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak1_136_92_0.267056763007749_6.6726871926119_0.727493611084222 chr11 23306552 23307899 + 0.727493611084222 NA intron (NM_001190401, intron 1 of 79) CpG-1781 330 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak1_150_102_0.259097377073821_6.81604921572013_0.727258671764709 chr3 105051844 105052928 + 0.727258671764709 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 567 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak2_124_123_-0.279295529053932_6.81454854585991_0.727258671764685 chr15 79949288 79950558 + 0.727258671764685 NA Intergenic Intergenic -17277 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_78_50_0.345142324303781_5.84499650412339_0.72709625494302-2 chr3 95660634 95661575 + 0.72709625494302 NA 3' UTR (NM_008562, exon 3 of 3) 3' UTR (NM_008562, exon 3 of 3) 2383 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_78_50_0.345142324303781_5.84499650412339_0.72709625494302 chr18 38185257 38186193 + 0.72709625494302 NA Intergenic Intergenic 24037 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_78_50_0.345142324303781_5.84499650412339_0.72709625494302-2 chr5 91721313 91722673 + 0.72709625494302 NA Intergenic Intergenic 45307 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA common_peak1_78_50_0.345142324303781_5.84499650412339_0.72709625494302 chr2 170246312 170247336 + 0.72709625494302 NA Intergenic Intergenic -104149 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_78_50_0.345142324303781_5.84499650412339_0.72709625494302-3 chr7 116093338 116094046 + 0.72709625494302 NA promoter-TSS (NR_029433) promoter-TSS (NR_029433) 312 NM_019772 56372 Mm.24231 NM_019772 ENSMUSG00000030663 1110004F10Rik Smacp|Smap|sid2057|sid2057p RIKEN cDNA 1110004F10 gene protein-coding common_peak1_60_65_-0.397238050055577_5.84577509433066_0.727096254943007 chr13 51845459 51846282 + 0.727096254943007 NA promoter-TSS (NM_011817) promoter-TSS (NM_011817) -805 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_60_65_-0.397238050055577_5.84577509433066_0.727096254943007 chr3 152188777 152190063 + 0.727096254943007 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 4425 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak2_60_65_-0.397238050055577_5.84577509433066_0.727096254943007-2 chr6 82128139 82129041 + 0.727096254943007 NA Intergenic B1_Mur2|SINE|Alu 86962 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding unique_peak2_0_2_-1.82670253821038_0.671611231615964_0.726998727936262-2 chr8 92000713 92000996 + 0.726998727936262 NA Intergenic MTEb|LTR|ERVL-MaLR -199200 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak2_0_2_-1.82670253821038_0.671611231615964_0.726998727936262 chr8 84388130 84388372 + 0.726998727936262 NA Intergenic L2a|LINE|L2 -27113 NM_001252060 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding unique_peak2_1_2_-0.833757517783628_1.16808374182934_0.726998727936262 chr2 100963330 100963529 + 0.726998727936262 NA Intergenic RLTR23|LTR|ERV1 -661319 NM_009020 19374 Mm.4988 NM_009020 ENSMUSG00000032864 Rag2 Rag-2 recombination activating gene 2 protein-coding unique_peak2_1_2_-0.833757517783628_1.16808374182934_0.726998727936262-2 chr6 98482360 98482604 + 0.726998727936262 NA Intergenic ID_B1|SINE|B4 -139728 NM_001128092 330390 Mm.484161 NM_001128092 ENSMUSG00000090667 Gm765 - predicted gene 765 protein-coding common_peak2_228_214_-0.206034521577267_7.64517558880083_0.726986851330858 chr15 61985591 61987036 + 0.726986851330858 NA intron (NM_001177353, intron 1 of 2) CpG 972 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak2_164_159_-0.249315170882213_7.19727050944626_0.726935093477802 chr6 108457760 108459134 + 0.726935093477802 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -31296 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_245_173_0.20179669440592_7.54384184305169_0.725799087766272 chr10 128492354 128494804 + 0.725799087766272 NA promoter-TSS (NM_001317220) promoter-TSS (NM_001317220) 307 NM_001317218 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_89_92_-0.334845643254692_6.37173598948069_0.725694037119043-3 chr8 122905696 122906411 + 0.725694037119043 NA intron (NR_037865, intron 4 of 13) intron (NR_037865, intron 4 of 13) 57679 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_89_92_-0.334845643254692_6.37173598948069_0.725694037119043-4 chr9 113707840 113708583 + 0.725694037119043 NA promoter-TSS (NM_001164677) promoter-TSS (NM_001164677) 48 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding common_peak1_112_74_0.301504011164371_6.37957069607807_0.725694037119043 chr9 98563740 98564571 + 0.725694037119043 NA promoter-TSS (NR_029444) promoter-TSS (NR_029444) 424 NM_015827 50797 Mm.400464 NM_015827 ENSMUSG00000032458 Copb2 AI256832 coatomer protein complex, subunit beta 2 (beta prime) protein-coding common_peak2_89_92_-0.334845643254692_6.37173598948069_0.725694037119043 chr18 61176583 61177238 + 0.725694037119043 NA 5' UTR (NM_178277, exon 1 of 20) 5' UTR (NM_178277, exon 1 of 20) 139 NM_178277 106894 Mm.22574 NM_134134 ENSMUSG00000024622 Hmgxb3 2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194 HMG box domain containing 3 protein-coding common_peak1_89_92_-0.334845643254692_6.37173598948069_0.725694037119043 chr1 78488304 78489326 + 0.725694037119043 NA promoter-TSS (NR_102757) promoter-TSS (NR_102757) 82 NR_102758 23874 Mm.17898 NM_011811 ENSMUSG00000026245 Farsb C76708|Farsa|Farsl|Farslb|Frsb phenylalanyl-tRNA synthetase, beta subunit protein-coding common_peak1_89_92_-0.334845643254692_6.37173598948069_0.725694037119043-2 chr2 167789523 167790498 + 0.725694037119043 NA Intergenic Intergenic 98833 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_111_74_0.288770444149556_6.37320391257066_0.725694037119043 chr5 110808780 110810050 + 0.725694037119043 NA intron (NM_001347394, intron 1 of 27) intron (NM_001347394, intron 1 of 27) 666 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding common_peak2_112_74_0.301504011164371_6.37957069607807_0.725694037119043 chr4 155235543 155236360 + 0.725694037119043 NA Intergenic Intergenic -13416 NM_001357191 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_124_83_0.282583358554183_6.53360910205585_0.725508625872716 chr1 75210535 75211519 + 0.725508625872716 NA promoter-TSS (NM_029010) promoter-TSS (NM_029010) 198 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak2_100_102_-0.317002627925805_6.52799921322032_0.725508625872691 chr8 61309347 61310621 + 0.725508625872691 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -21112 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak2_101_102_-0.302889047192557_6.53505600358694_0.725508625872691 chr8 121187112 121188331 + 0.725508625872691 NA Intergenic Intergenic 60036 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-2 chr11 76286882 76287783 + 0.725458513490998 NA intron (NM_008750, intron 1 of 7) MIR|SINE|MIR 43596 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-7 chr4 134703344 134703862 + 0.725458513490998 NA 5' UTR (NM_207237, exon 1 of 12) 5' UTR (NM_207237, exon 1 of 12) 687 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_37_43_-0.49026816409215_5.21429753659122_0.725458513490998 chr9 82830108 82830719 + 0.725458513490998 NA intron (NM_001168240, intron 1 of 2) intron (NM_001168240, intron 1 of 2) 607 NM_001168240 65099 Mm.41415 NM_022986 ENSMUSG00000032251 Irak1bp1 4921528N06Rik|AI851240|Aabp3|Aip70|Simpl interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-4 chr4 63558350 63559023 + 0.725458513490998 NA promoter-TSS (NM_001356354) promoter-TSS (NM_001356354) -77 NM_001356355 230279 Mm.41523 NM_144905 ENSMUSG00000045917 Tmem268 6330416G13Rik|AW492431|bM230C2.2 transmembrane protein 268 protein-coding unique_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-2 chr8 73233619 73234324 + 0.725458513490998 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 119569 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-6 chr5 108065813 108066183 + 0.725458513490998 NA intron (NM_001253880, intron 1 of 12) intron (NM_001253880, intron 1 of 12) 324 NR_152817 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-3 chr4 45455412 45456020 + 0.725458513490998 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -46950 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998 chr19 5924094 5924755 + 0.725458513490998 NA intron (NM_026772, intron 1 of 1) intron (NM_026772, intron 1 of 1) 392 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-8 chr6 120914569 120915260 + 0.725458513490998 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 1910 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-4 chr15 83445428 83445966 + 0.725458513490998 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 2183 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998 chr16 30069687 30070183 + 0.725458513490998 NA Intergenic Intergenic 4578 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-7 chr6 71987854 71988816 + 0.725458513490998 NA Intergenic RLTR31D_MM|LTR|ERVK 54193 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak1_36_43_-0.528470877579855_5.19519617984737_0.725458513490998 chr13 100124816 100125361 + 0.725458513490998 NA intron (NM_011420, intron 1 of 8) intron (NM_011420, intron 1 of 8) 233 NM_011420 20595 Mm.2025 NM_011420 ENSMUSG00000021645 Smn1 AI849087|Gemin1|Smn survival motor neuron 1 protein-coding common_peak1_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-2 chr19 53408887 53409104 + 0.725458513490998 NA Intergenic Intergenic -18361 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-3 chr15 10759567 10760098 + 0.725458513490998 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 44932 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-6 chr4 132639173 132639665 + 0.725458513490998 NA intron (NM_010166, intron 1 of 17) intron (NM_010166, intron 1 of 17) 373 NM_010166 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-5 chr4 95918204 95918730 + 0.725458513490998 NA intron (NM_001113412, intron 14 of 15) intron (NM_001113412, intron 14 of 15) 48568 NR_045777 319247 Mm.473527 NM_175680 ENSMUSG00000044125 9530080O11Rik - RIKEN cDNA 9530080O11 gene ncRNA common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998 chr10 16589059 16589474 + 0.725458513490998 NA Intergenic Intergenic 506516 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-3 chr3 63928944 63929312 + 0.725458513490998 NA promoter-TSS (NM_001357824) promoter-TSS (NM_001357824) -330 NM_001357824 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding common_peak2_37_43_-0.49026816409215_5.21429753659122_0.725458513490998-5 chr4 89038172 89038779 + 0.725458513490998 NA Intergenic Intergenic -11832 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998 chr8 46898063 46899113 + 0.725458513490998 NA Intergenic Intergenic -88299 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_36_43_-0.528470877579855_5.19519617984737_0.725458513490998-2 chr19 53408750 53409138 + 0.725458513490998 NA Intergenic Intergenic -18310 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_51_31_0.418483194881869_5.20924159744093_0.725458513490992-2 chr19 55713547 55713876 + 0.725458513490992 NA Intergenic Intergenic -11507 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_51_31_0.418483194881869_5.20924159744093_0.725458513490992-4 chr8 91313575 91313916 + 0.725458513490992 NA promoter-TSS (NM_173431) promoter-TSS (NM_173431) 220 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak2_51_31_0.418483194881869_5.20924159744093_0.725458513490992 chr11 75404694 75405162 + 0.725458513490992 NA 3' UTR (NM_001102611, exon 11 of 11) 3' UTR (NM_001102611, exon 11 of 11) 17695 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_51_31_0.418483194881869_5.20924159744093_0.725458513490992 chr11 17468134 17468842 + 0.725458513490992 NA Intergenic Intergenic 210800 NM_001330649 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding common_peak2_51_31_0.418483194881869_5.20924159744093_0.725458513490992-3 chr3 9004183 9004655 + 0.725458513490992 NA promoter-TSS (NM_001357072) promoter-TSS (NM_001357072) -215 NM_001357072 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_51_31_0.418483194881869_5.20924159744093_0.725458513490992-5 chr3 107756123 107756870 + 0.725458513490992 NA intron (NM_007778, intron 2 of 8) intron (NM_007778, intron 2 of 8) 3973 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_51_31_0.418483194881869_5.20924159744093_0.725458513490992-3 chr13 32480303 32480897 + 0.725458513490992 NA Intergenic Intergenic -142056 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_51_31_0.418483194881869_5.20924159744093_0.725458513490992-4 chr13 34993604 34994147 + 0.725458513490992 NA 5' UTR (NM_011868, exon 1 of 10) 5' UTR (NM_011868, exon 1 of 10) 269 NM_011868 23986 Mm.491141 NM_011868 ENSMUSG00000021417 Eci2 Acbd2|Drs1|Hca88|Peci enoyl-Coenzyme A delta isomerase 2 protein-coding common_peak1_51_31_0.418483194881869_5.20924159744093_0.725458513490992-2 chr11 99106647 99107168 + 0.725458513490992 NA Intergenic Intergenic -17601 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding common_peak2_164_113_0.239722909840409_6.95275146908495_0.725374935881882 chr15 38451877 38453323 + 0.725374935881882 NA Intergenic Intergenic 37947 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_137_135_-0.270828916799874_6.9520483828504_0.725374935881882 chr1 36555975 36557346 + 0.725374935881882 NA intron (NM_001304329, intron 1 of 14) intron (NM_001304329, intron 1 of 14) 897 NM_001304330 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak2_164_113_0.239722909840409_6.95275146908495_0.725374935881882-2 chr2 30721131 30722927 + 0.725374935881882 NA TTS (NR_037272) TTS (NR_037272) 819 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_165_113_0.248378627152933_6.95707932774121_0.725374935881882 chr7 145110979 145112476 + 0.725374935881882 NA Intergenic Intergenic 96392 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak1_532_473_-0.13639551020699_8.82054549379476_0.724907934434418 chr15 59648783 59651316 + 0.724907934434418 NA intron (NM_144549, intron 1 of 2) intron (NM_144549, intron 1 of 2) 1395 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_264_187_0.196728143199614_7.65295292327744_0.724864216807889 chr5 103753154 103755652 + 0.724864216807889 NA promoter-TSS (NM_001080798) promoter-TSS (NM_001080798) -170 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_60_37_0.399228555859291_5.44754179137323_0.724428647890298-3 chr9 21073037 21073472 + 0.724428647890298 NA TTS (NM_027911) TTS (NM_027911) 260 NM_001039824 68165 Mm.490294 NM_001039824 ENSMUSG00000079677 Fdx1l B230118G17Rik|Fdx2 ferredoxin 1-like protein-coding common_peak1_44_50_-0.461057194544911_5.44189674469904_0.724428647890298-3 chr5 100429138 100429519 + 0.724428647890298 NA non-coding (NR_034038, exon 1 of 5) non-coding (NR_034038, exon 1 of 5) 207 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA common_peak2_44_50_-0.461057194544911_5.44189674469904_0.724428647890298-3 chr2 130274499 130275220 + 0.724428647890298 NA promoter-TSS (NR_028547) promoter-TSS (NR_028547) 447 NR_149733 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak2_44_50_-0.461057194544911_5.44189674469904_0.724428647890298-2 chr10 92721894 92722357 + 0.724428647890298 NA intron (NM_008682, intron 1 of 14) CpG 293 NM_008682 17997 Mm.2998 NM_008682 ENSMUSG00000019988 Nedd1 - neural precursor cell expressed, developmentally down-regulated gene 1 protein-coding common_peak1_60_37_0.399228555859291_5.44754179137323_0.724428647890298-2 chr7 3290576 3291088 + 0.724428647890298 NA intron (NM_001093765, intron 1 of 2) intron (NM_001093765, intron 1 of 2) 276 NM_001093765 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak2_60_37_0.399228555859291_5.44754179137323_0.724428647890298 chr1 133024877 133025346 + 0.724428647890298 NA intron (NM_008575, intron 1 of 11) CpG 305 NR_126506 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak1_44_50_-0.461057194544911_5.44189674469904_0.724428647890298-2 chr2 151038773 151039290 + 0.724428647890298 NA intron (NM_026086, intron 1 of 1) CpG 348 NM_026086 67311 Mm.480682 NM_026086 ENSMUSG00000053916 Nanp 1600031M04Rik|Hdhd4 N-acetylneuraminic acid phosphatase protein-coding common_peak2_60_37_0.399228555859291_5.44754179137323_0.724428647890298-2 chr9 42109408 42109847 + 0.724428647890298 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 14670 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_44_50_-0.461057194544911_5.44189674469904_0.724428647890298-4 chr8 36899271 36900161 + 0.724428647890298 NA intron (NM_001194940, intron 2 of 17) intron (NM_001194940, intron 2 of 17) 52726 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_44_50_-0.461057194544911_5.44189674469904_0.724428647890298 chr10 71347907 71348601 + 0.724428647890298 NA intron (NM_027184, intron 1 of 5) CpG 491 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding common_peak1_60_37_0.399228555859291_5.44754179137323_0.724428647890298 chr11 60115501 60116012 + 0.724428647890298 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 10743 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_44_50_-0.461057194544911_5.44189674469904_0.724428647890298 chr11 43682171 43682746 + 0.724428647890298 NA exon (NM_001164231, exon 1 of 4) exon (NM_001164231, exon 1 of 4) 460 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding unique_peak2_44_50_-0.461057194544911_5.44189674469904_0.724428647890298 chr17 79373416 79374157 + 0.724428647890298 NA Intergenic Intergenic -18695 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_44_50_-0.461057194544911_5.44189674469904_0.724428647890298-4 chr5 104380153 104380628 + 0.724428647890298 NA Intergenic Intergenic -54721 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_213_201_-0.213100425295879_7.55166127010386_0.723529714452942 chr11 120186567 120189862 + 0.723529714452942 NA intron (NR_030682, intron 2 of 2) CpG 1642 NR_030682 100042332 Mm.269766 NR_030682 2810410L24Rik - RIKEN cDNA 2810410L24 gene ncRNA common_peak1_137_93_0.262045072772827_6.68561138806405_0.723340035540882 chr10 71123764 71125200 + 0.723340035540882 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 35208 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_137_93_0.262045072772827_6.68561138806405_0.723340035540882-2 chr3 58576701 58577634 + 0.723340035540882 NA intron (NM_001040396, intron 1 of 5) CpG 531 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding common_peak2_229_161_0.208550238519019_7.44412512214413_0.72323805677248 chr3 144204078 144206076 + 0.72323805677248 NA 5' UTR (NM_010723, exon 1 of 5) 5' UTR (NM_010723, exon 1 of 5) 178 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_89_58_0.321670118491498_6.04347810860759_0.72320139087996 chr9 72275167 72276378 + 0.72320139087996 NA intron (NM_146224, intron 1 of 21) intron (NM_146224, intron 1 of 21) 884 NM_001311105 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_89_58_0.321670118491498_6.04347810860759_0.72320139087996-2 chr7 12921581 12922053 + 0.72320139087996 NA promoter-TSS (NM_009095) promoter-TSS (NM_009095) -494 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_70_74_-0.364197948789149_6.04671971610131_0.72320139087996 chr8 109750160 109751315 + 0.72320139087996 NA Intergenic Intergenic -12998 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding common_peak1_89_58_0.321670118491498_6.04347810860759_0.72320139087996 chr4 47474098 47475229 + 0.72320139087996 NA promoter-TSS (NM_019998) promoter-TSS (NM_019998) 2 NM_024171 66212 Mm.20188 NM_024171 ENSMUSG00000053317 Sec61b 1190006C12Rik|AI326121|AW122942 Sec61 beta subunit protein-coding common_peak2_79_83_-0.356730438953575_6.21395220330197_0.723126769145835 chr11 8634225 8634938 + 0.723126769145835 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 29954 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_80_83_-0.338934969651147_6.22284993795319_0.723126769145835 chr2 58565757 58566831 + 0.723126769145835 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 534 NM_001110205 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak2_101_66_0.31752228953289_6.22485033522422_0.723126769145835 chr3 121685994 121686784 + 0.723126769145835 NA Intergenic Intergenic 15626 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_230_216_-0.20693615761908_7.65808315363494_0.722762649400777 chr4 136143903 136146024 + 0.722762649400777 NA 3' UTR (NM_008321, exon 3 of 3) 3' UTR (NM_008321, exon 3 of 3) 1141 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_266_247_-0.192108461332735_7.85814207972051_0.722514706554977 chr10 108161091 108163243 + 0.722514706554977 NA promoter-TSS (NM_027892) promoter-TSS (NM_027892) -233 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_181_125_0.235807341382838_7.09518359419134_0.722301674265164 chr12 111574516 111576220 + 0.722301674265164 NA promoter-TSS (NR_045295) promoter-TSS (NR_045295) 858 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding common_peak1_152_148_-0.254721438244044_7.09180780134014_0.722301674265164 chr7 141228408 141229797 + 0.722301674265164 NA intron (NM_001081118, intron 1 of 17) CpG 314 NM_001081118 101471 Mm.248656 NM_207211 ENSMUSG00000038611 Phrf1 AA673488 PHD and ring finger domains 1 protein-coding common_peak1_139_136_-0.260786049561211_6.96763905817992_0.721971334357374 chr6 134035157 134036249 + 0.721971334357374 NA promoter-TSS (NM_007961) promoter-TSS (NM_007961) 3 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding unique_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203 chr2 118669463 118669946 + 0.721233599456203 NA intron (NM_001033254, intron 2 of 10) intron (NM_001033254, intron 2 of 10) 6127 NM_001033254 214230 Mm.241857 NM_001033254 ENSMUSG00000074923 Pak6 4732456M09 p21 (RAC1) activated kinase 6 protein-coding common_peak1_24_31_-0.630646158274448_4.68467692086278_0.721233599456203 chr10 17583915 17584343 + 0.721233599456203 NA Intergenic Intergenic -139099 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203 chr3 142391147 142391651 + 0.721233599456203 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 451 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-3 chr12 112950873 112951458 + 0.721233599456203 NA Intergenic Intergenic -9023 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203-2 chr5 137613015 137613508 + 0.721233599456203 NA intron (NM_027708, intron 9 of 9) intron (NM_027708, intron 9 of 9) -1857 NM_008788 18542 Mm.262345 NM_008788 ENSMUSG00000029718 Pcolce Astt-2|Astt2|P14|PCPE-1 procollagen C-endopeptidase enhancer protein protein-coding common_peak2_36_21_0.471529122420145_4.69519617984737_0.721233599456203 chr1 166002326 166002552 + 0.721233599456203 NA intron (NM_198932, intron 1 of 15) CpG 195 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-6 chr5 92218492 92219061 + 0.721233599456203 NA Intergenic ID_B1|SINE|B4 -3368 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-7 chr8 34063339 34063973 + 0.721233599456203 NA Intergenic Intergenic 44158 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203 chr16 13437530 13437896 + 0.721233599456203 NA Intergenic Intergenic -11810 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA unique_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-2 chr11 120617343 120617870 + 0.721233599456203 NA TTS (NM_153056) TTS (NM_153056) 284 NM_024229 68671 Mm.21439 NM_024229 ENSMUSG00000025137 Pcyt2 1110033E03Rik|ET phosphate cytidylyltransferase 2, ethanolamine protein-coding common_peak2_36_21_0.471529122420145_4.69519617984737_0.721233599456203-2 chr14 70351008 70351335 + 0.721233599456203 NA intron (NM_144808, intron 1 of 9) CpG 253 NM_144808 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding unique_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203 chr1 78346855 78347658 + 0.721233599456203 NA intron (NM_001004173, intron 1 of 4) intron (NM_001004173, intron 1 of 4) 36910 NM_001004173 433323 Mm.276248 NM_001004173 ENSMUSG00000032908 Sgpp2 SPPase2|Spp2 sphingosine-1-phosphate phosphotase 2 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203 chr1 16227225 16227560 + 0.721233599456203 NA Intergenic Intergenic 121510 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-9 chr9 32715090 32715637 + 0.721233599456203 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 19321 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203-5 chr7 82867308 82867677 + 0.721233599456203 NA 5' UTR (NM_175366, exon 1 of 2) 5' UTR (NM_175366, exon 1 of 2) 159 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203 chr1 40438933 40439387 + 0.721233599456203 NA promoter-TSS (NM_010743) promoter-TSS (NM_010743) -469 NM_001025602 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-4 chr3 142526766 142527266 + 0.721233599456203 NA Intergenic Intergenic -3320 NM_001083312 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-2 chr1 60179520 60180132 + 0.721233599456203 NA promoter-TSS (NM_173444) promoter-TSS (NM_173444) -773 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding unique_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-2 chr10 68355793 68356338 + 0.721233599456203 NA Intergenic Intergenic -34923 NR_045357 75148 Mm.23505 NR_045357 ENSMUSG00000112157 4930545H06Rik - RIKEN cDNA 4930545H06 gene ncRNA unique_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203-2 chr4 41464198 41464751 + 0.721233599456203 NA promoter-TSS (NM_025539) promoter-TSS (NM_025539) 374 NM_024241 109242 Mm.370288 NM_024241 ENSMUSG00000028438 Kif24 4933425J19Rik|9430029L23Rik kinesin family member 24 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-8 chr9 32699992 32700334 + 0.721233599456203 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 4121 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203-4 chr7 51913301 51913937 + 0.721233599456203 NA intron (NM_001330607, intron 3 of 7) intron (NM_001330607, intron 3 of 7) 34652 NM_001330607 14453 Mm.207360 NM_008087 ENSMUSG00000030498 Gas2 Gas-2 growth arrest specific 2 protein-coding unique_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-4 chr18 36679661 36680031 + 0.721233599456203 NA promoter-TSS (NM_001357512) promoter-TSS (NM_001357512) -480 NM_146085 225372 Mm.89673 NM_146085 ENSMUSG00000006050 Apbb3 Fe65l2|Rirl2|TR2S amyloid beta (A4) precursor protein-binding, family B, member 3 protein-coding common_peak1_25_31_-0.574461825544887_4.71276908722756_0.721233599456203 chr7 68131507 68131900 + 0.721233599456203 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 132530 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak2_37_21_0.50973183590785_4.71429753659122_0.721233599456203 chr15 77151249 77151573 + 0.721233599456203 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 2401 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_37_21_0.50973183590785_4.71429753659122_0.721233599456203-3 chr9 32699997 32700340 + 0.721233599456203 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 4126 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-4 chr9 45939643 45940065 + 0.721233599456203 NA promoter-TSS (NR_106055) promoter-TSS (NR_106055) -264 NR_106055 102465659 NR_106055 ENSMUSG00000098327 Mir7087 Gm27273|mmu-mir-7087 microRNA 7087 ncRNA common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-6 chr6 127992982 127993506 + 0.721233599456203 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 105622 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding unique_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-2 chr6 113326016 113326493 + 0.721233599456203 NA promoter-TSS (NR_149720) promoter-TSS (NR_149720) -722 NR_149720 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-4 chr17 22866743 22867180 + 0.721233599456203 NA intron (NM_177358, intron 1 of 5) intron (NM_177358, intron 1 of 5) 173 NM_177358 240041 Mm.328828 NM_177358 ENSMUSG00000059142 Zfp945 A630033E08Rik|C730040L01Rik zinc finger protein 945 protein-coding common_peak2_36_21_0.471529122420145_4.69519617984737_0.721233599456203-6 chr9 121297793 121298133 + 0.721233599456203 NA intron (NR_152160, intron 1 of 17) CpG 461 NR_152160 67095 Mm.491112 NM_175114 ENSMUSG00000032536 Trak1 2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042 trafficking protein, kinesin binding 1 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-5 chr4 129188803 129189238 + 0.721233599456203 NA promoter-TSS (NM_134151) promoter-TSS (NM_134151) 522 NM_029036 74648 Mm.172064 NM_029036 ENSMUSG00000040928 S100pbp 4930429A08Rik|AI851343|S100pbpr S100P binding protein protein-coding unique_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-3 chr7 88547007 88547534 + 0.721233599456203 NA Intergenic Intergenic 116997 NM_028238 72433 Mm.276669 NM_028238 ENSMUSG00000030559 Rab38 2310011F14Rik|AU043391|cht RAB38, member RAS oncogene family protein-coding common_peak2_37_21_0.50973183590785_4.71429753659122_0.721233599456203-2 chr19 43879421 43879720 + 0.721233599456203 NA intron (NM_028029, intron 4 of 15) CpG 198 NM_001306088 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-4 chr4 11323171 11323760 + 0.721233599456203 NA Intergenic Intergenic -1334 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-6 chr8 115903820 115904130 + 0.721233599456203 NA Intergenic MLT1E2|LTR|ERVL-MaLR -197081 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-5 chr2 173043286 173043900 + 0.721233599456203 NA Intergenic Intergenic 21691 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203 chr11 102430595 102431202 + 0.721233599456203 NA intron (NM_008175, intron 1 of 12) intron (NM_008175, intron 1 of 12) 576 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding common_peak2_36_21_0.471529122420145_4.69519617984737_0.721233599456203-5 chr7 101933401 101933755 + 0.721233599456203 NA intron (NM_027053, intron 1 of 5) intron (NM_027053, intron 1 of 5) 279 NM_027053 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding common_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203 chr12 84114495 84114938 + 0.721233599456203 NA intron (NM_028821, intron 1 of 7) intron (NM_028821, intron 1 of 7) 388 NM_001346528 105000 Mm.101525 NM_028821 ENSMUSG00000042523 Dnal1 1700010H15Rik|AW121714|Dnalc1|E330027P08Rik dynein, axonemal, light chain 1 protein-coding common_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-3 chr2 120153763 120154263 + 0.721233599456203 NA intron (NM_133838, intron 1 of 5) intron (NM_133838, intron 1 of 5) 562 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-4 chr7 144245039 144245822 + 0.721233599456203 NA intron (NM_001113373, intron 4 of 15) intron (NM_001113373, intron 4 of 15) -38955 NM_001081370 210274 Mm.483624 NM_001081370 ENSMUSG00000037541 Shank2 ProSAP1|mKIAA1022 SH3 and multiple ankyrin repeat domains 2 protein-coding unique_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-3 chr2 52424096 52424604 + 0.721233599456203 NA intron (NM_182994, intron 1 of 5) CpG 524 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding common_peak2_25_31_-0.574461825544887_4.71276908722756_0.721233599456203-2 chr10 43901853 43902210 + 0.721233599456203 NA promoter-TSS (NM_001081054) promoter-TSS (NM_001081054) 224 NM_130892 170728 Mm.390253 NM_130892 ENSMUSG00000019864 Rtn4ip1 D10Ertd690e|NIMP reticulon 4 interacting protein 1 protein-coding common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-3 chr17 34644849 34645301 + 0.721233599456203 NA intron (NM_019873, intron 1 of 1) intron (NM_019873, intron 1 of 1) 192 NM_019873 56299 Mm.10025 NM_019873 ENSMUSG00000033739 Fkbpl DIR1|NG7|Ppiase-X|Wisp39 FK506 binding protein-like protein-coding common_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-5 chr8 103231402 103231815 + 0.721233599456203 NA Intergenic Intergenic 115926 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-7 chr5 139018027 139018385 + 0.721233599456203 NA 3' UTR (NM_001253890, exon 11 of 11) 3' UTR (NM_001253890, exon 11 of 11) -23253 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_24_31_-0.630646158274448_4.68467692086278_0.721233599456203-3 chr7 19338018 19338682 + 0.721233599456203 NA Intergenic Intergenic -6721 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak2_36_21_0.471529122420145_4.69519617984737_0.721233599456203-4 chr6 94648022 94648544 + 0.721233599456203 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -41868 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA common_peak1_36_21_0.471529122420145_4.69519617984737_0.721233599456203-2 chr2 110177202 110177682 + 0.721233599456203 NA Intergenic Intergenic -126963 NR_040508 75517 Mm.363927 NR_040508 ENSMUSG00000086186 Ccdc34os 1700024P03Rik coiled-coil domain containing 34, opposite strand ncRNA unique_peak1_37_21_0.50973183590785_4.71429753659122_0.721233599456203-3 chr14 31128202 31128785 + 0.721233599456203 NA intron (NM_001308091, intron 1 of 1) intron (NM_001308091, intron 1 of 1) 437 NM_001308466 66487 Mm.379116 NM_001308091 ENSMUSG00000058351 Smim4 2010107H07Rik|Gm41122 small integral membrane protein 4 protein-coding common_peak2_36_21_0.471529122420145_4.69519617984737_0.721233599456203-3 chr6 31062347 31062829 + 0.721233599456203 NA TTS (NR_029532) TTS (NR_029532) 159 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak2_196_137_0.218013905296506_7.21753140942642_0.721205750361817 chr19 8941964 8942850 + 0.721205750361817 NA TTS (NM_144872) TTS (NM_144872) 487 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding common_peak2_167_161_-0.241425266011732_7.21913736987876_0.721205750361817 chr1 182017860 182020107 + 0.721205750361817 NA intron (NM_001083121, intron 1 of 13) intron (NM_001083121, intron 1 of 13) 997 NM_010135 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak2_102_103_-0.302852353082865_6.54901354159966_0.720952936333916 chr11 95084235 95085804 + 0.720952936333916 NA Intergenic Intergenic -8208 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_125_84_0.276924382535889_6.54785312740565_0.720952936333916 chr8 105496309 105497218 + 0.720952936333916 NA intron (NM_175160, intron 1 of 13) CpG 139 NM_175160 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding common_peak2_125_84_0.276924382535889_6.54785312740565_0.720952936333916 chr6 83032968 83033971 + 0.720952936333916 NA promoter-TSS (NM_001291799) promoter-TSS (NM_001291799) 2 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak2_90_93_-0.334446607221639_6.38736554806682_0.720618907161341 chr2 30048676 30049533 + 0.720618907161341 NA promoter-TSS (NM_001008498) promoter-TSS (NM_001008498) -225 NM_001008498 71820 Mm.88053 NM_001008498 ENSMUSG00000039715 Wdr34 3200002I06Rik WD repeat domain 34 protein-coding common_peak1_91_93_-0.318790529454627_6.39519358695032_0.720618907161341 chr2 167833409 167834608 + 0.720618907161341 NA Intergenic Intergenic -98319 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_113_75_0.295016563755771_6.39543579532147_0.720618907161341 chr8 25331545 25332322 + 0.720618907161341 NA Intergenic Intergenic -25663 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak2_113_75_0.295016563755771_6.39543579532147_0.720618907161341 chr19 8967502 8968676 + 0.720618907161341 NA intron (NM_026007, intron 1 of 9) intron (NM_026007, intron 1 of 9) 1048 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding unique_peak2_30_37_-0.570422994317559_4.96271601628481_0.720235944639228-2 chr9 41736240 41736848 + 0.720235944639228 NA Intergenic C-rich|Low_complexity|Low_complexity 154618 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-4 chr5 34168906 34169391 + 0.720235944639228 NA intron (NM_146159, intron 1 of 4) intron (NM_146159, intron 1 of 4) 276 NM_146159 231123 Mm.319286 NM_146159 ENSMUSG00000079555 Haus3 D4S43h|D5H4S43|D5H4S43E HAUS augmin-like complex, subunit 3 protein-coding common_peak1_31_37_-0.524942448799034_4.98545628904407_0.720235944639228 chr10 86162030 86162438 + 0.720235944639228 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 66380 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_30_37_-0.570422994317559_4.96271601628481_0.720235944639228-2 chr7 98486821 98487146 + 0.720235944639228 NA Intergenic Intergenic -7239 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-2 chr15 59480049 59480303 + 0.720235944639228 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) 105978 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak1_30_37_-0.570422994317559_4.96271601628481_0.720235944639228 chr11 102887644 102888056 + 0.720235944639228 NA 3' UTR (NM_010277, exon 9 of 9) 3' UTR (NM_010277, exon 9 of 9) 2681 NM_025766 66784 Mm.483216 NM_025766 ENSMUSG00000075510 Fam187a 4933439F11Rik family with sequence similarity 187, member A protein-coding common_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-2 chr16 45878041 45878694 + 0.720235944639228 NA Intergenic Intergenic -33616 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228 chr8 115906100 115906754 + 0.720235944639228 NA Intergenic Intergenic -199533 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-3 chr18 47330662 47331031 + 0.720235944639228 NA intron (NM_001311097, intron 1 of 17) intron (NM_001311097, intron 1 of 17) 38022 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-5 chr5 74172504 74173111 + 0.720235944639228 NA Intergenic Intergenic -22519 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding common_peak1_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-5 chr8 121229909 121230152 + 0.720235944639228 NA Intergenic Intergenic 102345 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-3 chr4 130000045 130000611 + 0.720235944639228 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 8274 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-6 chr8 84689645 84690059 + 0.720235944639228 NA exon (NM_001164560, exon 2 of 17) exon (NM_001164560, exon 2 of 17) 605 NM_198020 212528 Mm.275720 NM_198020 ENSMUSG00000001909 Trmt1 6720406L13Rik|6720477L24|D8Ertd812e tRNA methyltransferase 1 protein-coding common_peak2_31_37_-0.524942448799034_4.98545628904407_0.720235944639228 chr12 76545770 76546136 + 0.720235944639228 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 1972 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_30_37_-0.570422994317559_4.96271601628481_0.720235944639228 chr5 72167685 72168056 + 0.720235944639228 NA intron (NM_178599, intron 1 of 4) CpG 319 NM_001356611 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak1_31_37_-0.524942448799034_4.98545628904407_0.720235944639228-4 chr7 5014895 5015185 + 0.720235944639228 NA promoter-TSS (NM_025324) promoter-TSS (NM_025324) -312 NM_001110328 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding unique_peak2_30_37_-0.570422994317559_4.96271601628481_0.720235944639228 chr15 86168492 86169049 + 0.720235944639228 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) -16958 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-2 chr14 121250009 121250710 + 0.720235944639222 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 1653 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_44_26_0.456480645263116_4.98312782479503_0.720235944639222-5 chr7 34912444 34912894 + 0.720235944639222 NA intron (NM_008820, intron 1 of 14) intron (NM_008820, intron 1 of 14) 262 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak2_44_26_0.456480645263116_4.98312782479503_0.720235944639222-4 chr2 119208481 119208802 + 0.720235944639222 NA promoter-TSS (NM_001164827) promoter-TSS (NM_001164827) -79 NM_001164827 72008 Mm.386807 NM_028054 ENSMUSG00000068580 Zfyve19 1500041L05Rik|ANCHR zinc finger, FYVE domain containing 19 protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-7 chr7 98415875 98416418 + 0.720235944639222 NA Intergenic Intergenic -24270 NM_001130693 14918 Mm.389928 NM_001034890 ENSMUSG00000074003 Gucy2d - guanylate cyclase 2d protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-9 chr9 41585662 41586169 + 0.720235944639222 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 3989 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_44_26_0.456480645263116_4.98312782479503_0.720235944639222-3 chr19 5467444 5468055 + 0.720235944639222 NA intron (NM_009985, intron 2 of 9) intron (NM_009985, intron 2 of 9) 758 NM_009985 13041 Mm.113590 NM_009985 ENSMUSG00000024910 Ctsw lymphopain cathepsin W protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-4 chr5 92368679 92369251 + 0.720235944639222 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -5669 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding common_peak2_44_26_0.456480645263116_4.98312782479503_0.720235944639222 chr1 21002730 21003164 + 0.720235944639222 NA intron (NM_177409, intron 10 of 10) intron (NM_177409, intron 10 of 10) 51321 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-6 chr7 81420552 81421190 + 0.720235944639222 NA intron (NM_001252525, intron 2 of 11) intron (NM_001252525, intron 2 of 11) 33887 NM_001252525 12877 Mm.273122 NM_007755 ENSMUSG00000025586 Cpeb1 AU024112|Cpe-bp1|Cpeb|mCPEB|mCpeb-1 cytoplasmic polyadenylation element binding protein 1 protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-3 chr3 121593235 121593624 + 0.720235944639222 NA Intergenic Intergenic 50056 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-8 chr8 110817295 110817827 + 0.720235944639222 NA exon (NM_133953, exon 18 of 26) exon (NM_133953, exon 18 of 26) -11637 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_44_26_0.456480645263116_4.98312782479503_0.720235944639222-2 chr15 80263960 80264273 + 0.720235944639222 NA exon (NM_175109, exon 2 of 4) exon (NM_175109, exon 2 of 4) 190 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222-5 chr6 137568701 137569402 + 0.720235944639222 NA intron (NM_001271588, intron 1 of 20) intron (NM_001271588, intron 1 of 20) 1958 NM_001271595 13860 Mm.235346 NM_007945 ENSMUSG00000015766 Eps8 AW261790 epidermal growth factor receptor pathway substrate 8 protein-coding common_peak1_44_26_0.456480645263116_4.98312782479503_0.720235944639222 chr10 12809850 12810562 + 0.720235944639222 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 51529 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_61_66_-0.39563965090499_5.86826936500528_0.719772390806939-2 chr17 63499707 63500338 + 0.719772390806939 NA 5' UTR (NM_015794, exon 1 of 9) 5' UTR (NM_015794, exon 1 of 9) 558 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak1_61_66_-0.39563965090499_5.86826936500528_0.719772390806939 chr6 82892845 82893420 + 0.719772390806939 NA Intergenic Intergenic -11279 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak2_61_66_-0.39563965090499_5.86826936500528_0.719772390806939 chr11 78182982 78183514 + 0.719772390806939 NA promoter-TSS (NR_037683) promoter-TSS (NR_037683) -135 NR_037683 100529077 NR_037683 Snord42b MBII-287|U42B small nucleolar RNA, C/D box 42B snoRNA common_peak1_79_51_0.335147265684094_5.86801335098314_0.719772390806927-3 chr9 58582476 58583422 + 0.719772390806927 NA intron (NR_151824, intron 1 of 7) intron (NR_151824, intron 1 of 7) 709 NM_001357751 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak1_79_51_0.335147265684094_5.86801335098314_0.719772390806927-2 chr9 18292343 18292702 + 0.719772390806927 NA intron (NM_025844, intron 1 of 10) CpG 255 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding common_peak1_80_51_0.352942734986522_5.87691108563435_0.719772390806927 chr10 96633255 96634173 + 0.719772390806927 NA Intergenic Intergenic 16713 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_79_51_0.335147265684094_5.86801335098314_0.719772390806927 chr10 98913708 98914444 + 0.719772390806927 NA promoter-TSS (NM_001359509) promoter-TSS (NM_001359509) -566 NM_001359506 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_79_51_0.335147265684094_5.86801335098314_0.719772390806927 chr11 97309589 97310312 + 0.719772390806927 NA Intergenic Intergenic -5766 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_80_51_0.352942734986522_5.87691108563435_0.719772390806927 chr10 13982865 13983691 + 0.719772390806927 NA intron (NM_001358782, intron 1 of 9) intron (NM_001358782, intron 1 of 9) 16899 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_53_58_-0.410096198461682_5.677594950131_0.719613425717097 chr11 95982096 95983068 + 0.719613425717097 NA intron (NM_009951, intron 2 of 14) intron (NM_009951, intron 2 of 14) -19199 NR_037223 100526468 NR_037223 ENSMUSG00000093358 Mir3063 mmu-mir-3063 microRNA 3063 ncRNA common_peak2_53_58_-0.410096198461682_5.677594950131_0.719613425717097-4 chr6 39205811 39206656 + 0.719613425717097 NA intron (NM_001033430, intron 1 of 19) CpG 540 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding common_peak1_52_58_-0.436872994091981_5.66420655231585_0.719613425717097-2 chr6 82756535 82757205 + 0.719613425717097 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 17584 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_53_58_-0.410096198461682_5.677594950131_0.719613425717097-2 chr4 84522627 84523176 + 0.719613425717097 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 152185 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak1_70_44_0.372767645377056_5.6782369190182_0.719613425717097-2 chr16 45072556 45073116 + 0.719613425717097 NA Intergenic Intergenic -21175 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_70_44_0.372767645377056_5.6782369190182_0.719613425717097 chr7 55842249 55842794 + 0.719613425717097 NA intron (NM_011370, intron 1 of 30) CpG 450 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_53_58_-0.410096198461682_5.677594950131_0.719613425717097 chr15 101254297 101254746 + 0.719613425717097 NA Intergenic Intergenic -12325 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|NUR77-1|NUR77-2|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak1_52_58_-0.436872994091981_5.66420655231585_0.719613425717097 chr18 36725952 36726713 + 0.719613425717097 NA exon (NM_009841, exon 2 of 2) exon (NM_009841, exon 2 of 2) 483 NM_009841 12475 Mm.3460 NM_009841 ENSMUSG00000051439 Cd14 - CD14 antigen protein-coding common_peak1_70_44_0.372767645377056_5.6782369190182_0.719613425717097 chr14 54107884 54108785 + 0.719613425717097 NA Intergenic Intergenic 145595 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_53_58_-0.410096198461682_5.677594950131_0.719613425717097-3 chr3 146520616 146521367 + 0.719613425717097 NA intron (NM_027371, intron 1 of 8) CpG 432 NM_027332 70285 Mm.28128 NM_027332 ENSMUSG00000028187 Rpf1 2210420E24Rik|2310066N05Rik|Bxdc5 ribosome production factor 1 homolog protein-coding common_peak2_53_58_-0.410096198461682_5.677594950131_0.719613425717097-2 chr17 45433158 45433627 + 0.719613425717097 NA promoter-TSS (NR_130960) promoter-TSS (NR_130960) 315 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak2_52_58_-0.436872994091981_5.66420655231585_0.719613425717097 chr6 143167156 143167904 + 0.719613425717097 NA exon (NM_029250, exon 1 of 8) exon (NM_029250, exon 1 of 8) 300 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding common_peak1_53_58_-0.410096198461682_5.677594950131_0.719613425717097-3 chr9 44725985 44726450 + 0.719613425717097 NA intron (NM_153537, intron 3 of 21) intron (NM_153537, intron 3 of 21) 8981 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_138_94_0.257121443052139_6.69841632985702_0.719266712247212 chr8 110825254 110826449 + 0.719266712247212 NA intron (NM_133953, intron 12 of 25) intron (NM_133953, intron 12 of 25) 12747 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_153_149_-0.255039217897935_7.10129908154691_0.719230678178271 chr8 88696913 88698277 + 0.719230678178271 NA intron (NM_001128170, intron 1 of 17) intron (NM_001128170, intron 1 of 17) 567 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak1_183_175_-0.230688275987531_7.34408748064353_0.719033646777468 chr5 145139512 145141172 + 0.719033646777468 NA promoter-TSS (NM_001033313) promoter-TSS (NM_001033313) -34 NM_001310771 231889 Mm.277413 NM_001008705 ENSMUSG00000038722 Bud31 C77604|EDG-2|EDG2|G10 BUD31 homolog protein-coding common_peak1_199_189_-0.221666705325128_7.45902225566838_0.718431431671568 chr18 6490050 6491300 + 0.718431431671568 NA promoter-TSS (NR_035446) promoter-TSS (NR_035446) -29 NR_035446 100316773 NR_035446 ENSMUSG00000084514 Mir1893 Mirn1893|mmu-mir-1893 microRNA 1893 ncRNA common_peak2_231_163_0.203251057612695_7.45917753342443_0.718431431671519 chr1 81744143 81746441 + 0.718431431671519 NA Intergenic Intergenic -386624 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA common_peak1_168_162_-0.241801808685135_7.22782724988851_0.718398558236451 chr12 102283785 102285499 + 0.718398558236451 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 1001 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_327_235_0.174206559092108_7.9697463289079_0.717820141550361 chr3 31095086 31096976 + 0.717820141550361 NA intron (NM_001039090, intron 1 of 6) intron (NM_001039090, intron 1 of 6) 973 NM_001271772 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak1_1243_939_0.0899831582958992_9.92150852571295_0.717810922391544 chr19 4213134 4219773 + 0.717810922391544 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 2064 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak2_81_84_-0.338431368537264_6.24017525186907_0.717512109809957 chr12 78748991 78750156 + 0.717512109809957 NA intron (NM_019579, intron 1 of 14) intron (NM_019579, intron 1 of 14) 626 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak1_102_67_0.310124523807888_6.24252510315428_0.717512109809957 chr15 85665197 85666089 + 0.717512109809957 NA Intergenic Intergenic -38130 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_102_67_0.310124523807888_6.24252510315428_0.717512109809957-2 chrX 142833813 142835318 + 0.717512109809957 NA 3' UTR (NM_001199360, exon 7 of 7) 3' UTR (NM_001199360, exon 7 of 7) 95565 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA common_peak1_81_84_-0.338431368537264_6.24017525186907_0.717512109809957 chr19 47730812 47731505 + 0.717512109809957 NA promoter-TSS (NM_026377) promoter-TSS (NM_026377) -598 NM_026377 67788 Mm.181610 NM_026377 ENSMUSG00000025066 Sfr1 6330577E15Rik|Meir5 SWI5 dependent recombination repair 1 protein-coding common_peak2_251_234_-0.197256607464653_7.77788864283267_0.717325856263513 chr11 53350372 53352176 + 0.717325856263513 NA intron (NM_033565, intron 1 of 20) CpG 507 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak1_71_75_-0.363271244344125_6.06629189127152_0.716869875017275 chr15 77921874 77922595 + 0.716869875017275 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 6760 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_91_59_0.328907726614492_6.07134445891576_0.716869875017263 chr7 144043927 144044890 + 0.716869875017263 NA Intergenic Intergenic 35154 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_90_59_0.31325164884748_6.06351642003226_0.716869875017263 chr1 181015758 181016422 + 0.716869875017263 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 1479 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding common_peak2_90_59_0.31325164884748_6.06351642003226_0.716869875017263 chr6 136808407 136809157 + 0.716869875017263 NA 3' UTR (NM_177688, exon 1 of 1) 3' UTR (NM_177688, exon 1 of 1) 534 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding common_peak2_91_59_0.328907726614492_6.07134445891576_0.716869875017263 chr11 94927944 94928774 + 0.716869875017263 NA Intergenic Intergenic -7865 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak1_126_85_0.271374866871818_6.56195218813801_0.716494160201277 chr10 52417586 52418755 + 0.716494160201277 NA intron (NM_030250, intron 1 of 4) CpG 623 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding common_peak1_372_338_-0.164120595355811_8.32308116545844_0.716221424759832 chr11 75461708 75464060 + 0.716221424759832 NA promoter-TSS (NR_029739) promoter-TSS (NR_029739) -832 NR_029739 387141 NR_029739 ENSMUSG00000065529 Mir22 Mirn22|mmu-mir-22 microRNA 22 ncRNA common_peak2_153_105_0.245859018034746_6.85084996358057_0.716156726114789 chr11 115956656 115958065 + 0.716156726114789 NA intron (NM_020483, intron 4 of 10) intron (NM_020483, intron 4 of 10) -17365 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_114_76_0.288668680281988_6.4111208808359_0.715663875945983 chr5 106695846 106696857 + 0.715663875945983 NA intron (NM_026856, intron 1 of 6) CpG 479 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding unique_peak1_114_76_0.288668680281988_6.4111208808359_0.715663875945983 chr16 33871584 33873210 + 0.715663875945983 NA intron (NM_001145884, intron 3 of 14) intron (NM_001145884, intron 3 of 14) 42732 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_288_206_0.182024753809293_7.78449933440397_0.7154351580666 chr7 113148033 113150853 + 0.7154351580666 NA Intergenic Intergenic -7428 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_140_95_0.262479425235109_6.71620221333871_0.71527133408291 chr3 107333307 107334542 + 0.71527133408291 NA promoter-TSS (NM_001045807) promoter-TSS (NM_001045807) -635 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak1_115_115_-0.29012295332355_6.7129195184658_0.715271334082885 chr9 57938527 57939969 + 0.715271334082885 NA promoter-TSS (NM_011352) promoter-TSS (NM_011352) -887 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding common_peak2_61_38_0.385047320690533_5.47792587920751_0.714844670794617-4 chr2 129129149 129129606 + 0.714844670794617 NA promoter-TSS (NM_025395) promoter-TSS (NM_025395) -323 NM_025395 66170 Mm.40621 NM_025395 ENSMUSG00000037938 Chchd5 1110027L01Rik|AW045710 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding common_peak1_61_38_0.385047320690533_5.47792587920751_0.714844670794617 chr17 74489103 74489991 + 0.714844670794617 NA promoter-TSS (NM_026417) promoter-TSS (NM_026417) 54 NM_026417 67864 Mm.41891 NM_026417 ENSMUSG00000024072 Yipf4 2310034L04Rik Yip1 domain family, member 4 protein-coding common_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-6 chr4 129513790 129514763 + 0.714844670794617 NA intron (NM_010807, intron 1 of 1) CpG 695 NM_010807 17357 Mm.424974 NM_010807 ENSMUSG00000047945 Marcksl1 AL022768|AW215397|AW536807|D4Bc1|F52|MacMARCKS|Macs2|Macs3|Mlp|Mrp MARCKS-like 1 protein-coding common_peak1_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-3 chr5 33343276 33343973 + 0.714844670794617 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 8052 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-5 chr17 44499740 44500328 + 0.714844670794617 NA intron (NR_073425, intron 5 of 5) (TC)n|Simple_repeat|Simple_repeat 236142 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_45_51_-0.457586416344837_5.47164650996867_0.714844670794617 chr11 87448276 87448626 + 0.714844670794617 NA intron (NM_001199293, intron 2 of 30) CpG 20860 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_61_38_0.385047320690533_5.47792587920751_0.714844670794617-3 chr19 4210415 4211061 + 0.714844670794617 NA Intergenic Intergenic -3500 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak2_61_38_0.385047320690533_5.47792587920751_0.714844670794617 chr14 105587998 105588572 + 0.714844670794617 NA Intergenic Intergenic -1264 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA common_peak1_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-2 chr12 33182298 33182782 + 0.714844670794617 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 34854 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-2 chr1 186568385 186569278 + 0.714844670794617 NA Intergenic Intergenic -10150 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_61_38_0.385047320690533_5.47792587920751_0.714844670794617-2 chr18 90510405 90510908 + 0.714844670794617 NA intron (NM_198295, intron 1 of 15) intron (NM_198295, intron 1 of 15) 502 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-4 chr15 11835069 11835744 + 0.714844670794617 NA Intergenic Intergenic 70268 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_61_38_0.385047320690533_5.47792587920751_0.714844670794617-5 chr5 140517019 140517625 + 0.714844670794617 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 11713 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617 chr1 135411267 135411751 + 0.714844670794617 NA intron (NM_001357578, intron 5 of 24) intron (NM_001357578, intron 5 of 24) 18982 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding common_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-3 chr14 18270285 18270964 + 0.714844670794617 NA promoter-TSS (NM_001316711) promoter-TSS (NM_001316711) 357 NM_001359897 66480 Mm.2050 NM_025586 ENSMUSG00000012405 Rpl15 2510008H07Rik ribosomal protein L15 protein-coding common_peak2_61_38_0.385047320690533_5.47792587920751_0.714844670794617-6 chr9 123529817 123530383 + 0.714844670794617 NA intron (NM_001357485, intron 1 of 19) CpG 347 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_45_51_-0.457586416344837_5.47164650996867_0.714844670794617-4 chr5 138194121 138194875 + 0.714844670794617 NA TTS (NM_178612) TTS (NM_178612) 184 NM_177878 330216 Mm.19719 NM_177878 ENSMUSG00000049285 Mblac1 - metallo-beta-lactamase domain containing 1 protein-coding unique_peak2_45_51_-0.457586416344837_5.47164650996867_0.714844670794617 chr15 81247834 81248578 + 0.714844670794617 NA promoter-TSS (NR_077229) promoter-TSS (NR_077229) -235 NR_077231 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak1_61_38_0.385047320690533_5.47792587920751_0.714844670794617-2 chr2 32535386 32536100 + 0.714844670794617 NA 5' UTR (NM_153560, exon 1 of 11) 5' UTR (NM_153560, exon 1 of 11) 384 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_291_268_-0.181156886137185_7.98088391948803_0.7145146601604 chr8 25069136 25071356 + 0.7145146601604 NA intron (NM_031257, intron 3 of 11) C-rich|Low_complexity|Low_complexity -31284 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak2_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-2 chr16 85165357 85166164 + 0.714193724415661 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 7947 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_38_44_-0.485479319647106_5.24911343650612_0.714193724415661 chr11 103382326 103382771 + 0.714193724415661 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18856 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-4 chr6 42509744 42510061 + 0.714193724415661 NA Intergenic Intergenic -22688 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak1_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-2 chr12 103425227 103425769 + 0.714193724415661 NA intron (NM_020494, intron 1 of 8) CpG 282 NM_001159502 27225 Mm.3935 NM_020494 ENSMUSG00000041645 Ddx24 1700055J08Rik|2510027P10Rik|AI649272 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 protein-coding common_peak2_38_44_-0.485479319647106_5.24911343650612_0.714193724415661 chr10 123075946 123076743 + 0.714193724415661 NA 5' UTR (NM_153395, exon 1 of 34) 5' UTR (NM_153395, exon 1 of 34) 161 NM_001163024 67074 Mm.169924 NM_153395 ENSMUSG00000034602 Mon2 2610528O22Rik|AW495628|Sf21|mKIAA1040 MON2 homolog, regulator of endosome to Golgi trafficking protein-coding common_peak2_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-3 chr2 74704588 74705443 + 0.714193724415661 NA promoter-TSS (NM_008276) promoter-TSS (NM_008276) 400 NM_001290731 15437 Mm.280673 NM_008276 ENSMUSG00000027102 Hoxd8 4921540P06Rik|AI047735|Hox-4.3|Hox-5.4 homeobox D8 protein-coding common_peak1_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-4 chr6 135011661 135012108 + 0.714193724415661 NA intron (NM_026360, intron 1 of 11) intron (NM_026360, intron 1 of 11) 272 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak1_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-3 chr2 180227668 180228355 + 0.714193724415661 NA Intergenic Intergenic -2152 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_38_44_-0.485479319647106_5.24911343650612_0.714193724415661-5 chr6 135011656 135012016 + 0.714193724415661 NA intron (NM_026360, intron 1 of 11) intron (NM_026360, intron 1 of 11) 224 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655-5 chr9 78622372 78623518 + 0.714193724415655 NA intron (NM_153098, intron 2 of 32) intron (NM_153098, intron 2 of 32) 7399 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding unique_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655 chr16 85900408 85901007 + 0.714193724415655 NA 5' UTR (NM_011782, exon 1 of 8) 5' UTR (NM_011782, exon 1 of 8) 418 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-8 chr8 84066910 84067300 + 0.714193724415655 NA intron (NM_009055, intron 1 of 20) CpG 269 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-9 chr8 110806655 110807552 + 0.714193724415655 NA Intergenic Intergenic -1179 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-3 chr11 87986872 87987488 + 0.714193724415655 NA promoter-TSS (NM_001168472) promoter-TSS (NM_001168472) 353 NM_026556 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_53_32_0.428152731541706_5.25847048512931_0.714193724415655-2 chr2 166805590 166806228 + 0.714193724415655 NA intron (NM_001085495, intron 1 of 38) CpG 328 NM_001085495 99371 Mm.297192 NM_001085495 ENSMUSG00000074582 Arfgef2 AI463430|AW493672|BIG2|E230011G24Rik ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding common_peak2_53_32_0.428152731541706_5.25847048512931_0.714193724415655-4 chr6 34867080 34867766 + 0.714193724415655 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 4277 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655 chr1 91257200 91257960 + 0.714193724415655 NA intron (NM_001355764, intron 3 of 10) intron (NM_001355764, intron 3 of 10) 7014 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655-3 chr14 121378608 121379209 + 0.714193724415655 NA exon (NM_145465, exon 1 of 11) exon (NM_145465, exon 1 of 11) 322 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-5 chr16 10411891 10412228 + 0.714193724415655 NA intron (NM_011955, intron 1 of 10) CpG 121 NM_011955 26425 Mm.29037 NM_011955 ENSMUSG00000022503 Nubp1 - nucleotide binding protein 1 protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-2 chr10 79766378 79766876 + 0.714193724415655 NA intron (NR_027505, intron 1 of 7) CpG 325 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding common_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655-2 chr13 108598621 108599554 + 0.714193724415655 NA Intergenic Intergenic -55090 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding common_peak2_52_32_0.401375935911407_5.24508208731416_0.714193724415655-3 chr3 106721941 106722463 + 0.714193724415655 NA intron (NM_028081, intron 1 of 2) CpG 520 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding common_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655 chr12 102280740 102281203 + 0.714193724415655 NA Intergenic Intergenic -2103 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655-4 chr2 26122267 26122774 + 0.714193724415655 NA intron (NM_026495, intron 1 of 5) CpG 291 NM_026495 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding common_peak2_52_32_0.401375935911407_5.24508208731416_0.714193724415655-2 chr3 87970394 87970855 + 0.714193724415655 NA promoter-TSS (NM_016701) promoter-TSS (NM_016701) -469 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-4 chr11 120624617 120625434 + 0.714193724415655 NA promoter-TSS (NR_105901) promoter-TSS (NR_105901) -23 NM_153056 209011 Mm.292957 NM_153056 ENSMUSG00000025138 Sirt7 - sirtuin 7 protein-coding common_peak2_53_32_0.428152731541706_5.25847048512931_0.714193724415655-3 chr4 43973554 43974253 + 0.714193724415655 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -9601 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak2_53_32_0.428152731541706_5.25847048512931_0.714193724415655 chr11 88468283 88468769 + 0.714193724415655 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 115753 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA unique_peak1_53_32_0.428152731541706_5.25847048512931_0.714193724415655-2 chr17 33755876 33756484 + 0.714193724415655 NA intron (NM_008997, intron 1 of 4) intron (NM_008997, intron 1 of 4) 4306 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak2_52_32_0.401375935911407_5.24508208731416_0.714193724415655-5 chr9 69471800 69472287 + 0.714193724415655 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 15099 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-7 chr8 70529056 70529822 + 0.714193724415655 NA exon (NM_001199631, exon 2 of 9) exon (NM_001199631, exon 2 of 9) 1593 NM_001199631 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding common_peak2_52_32_0.401375935911407_5.24508208731416_0.714193724415655-4 chr3 116189590 116190240 + 0.714193724415655 NA Intergenic Intergenic -60227 NM_011693 22329 Mm.76649 NM_011693 ENSMUSG00000027962 Vcam1 CD106|Vcam-1 vascular cell adhesion molecule 1 protein-coding common_peak2_52_32_0.401375935911407_5.24508208731416_0.714193724415655 chr19 25461451 25461893 + 0.714193724415655 NA Intergenic Intergenic -44034 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding common_peak1_52_32_0.401375935911407_5.24508208731416_0.714193724415655-6 chr16 90845821 90846329 + 0.714193724415655 NA intron (NM_001316761, intron 1 of 5) intron (NM_001316761, intron 1 of 5) 15216 NM_001316761 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding common_peak2_186_177_-0.223822194823925_7.36382233355443_0.71394165721747 chr8 90813742 90815221 + 0.71394165721747 NA Intergenic Intergenic -14354 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_186_177_-0.223822194823925_7.36382233355443_0.71394165721747 chr8 90813825 90815284 + 0.71394165721747 NA Intergenic Intergenic -14281 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_216_152_0.207665766861016_7.36122072612316_0.713941657217421 chr4 48584805 48586723 + 0.713941657217421 NA intron (NM_021436, intron 1 of 9) CpG 590 NM_021436 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849 chr10 23457993 23458299 + 0.713635438203849 NA Intergenic Intergenic -108203 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-11 chr17 35998628 35998935 + 0.713635438203849 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 4277 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-8 chr19 47178884 47179380 + 0.713635438203849 NA 5' UTR (NM_021360, exon 1 of 6) 5' UTR (NM_021360, exon 1 of 6) 312 NM_021360 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-13 chr7 98488806 98489176 + 0.713635438203849 NA Intergenic Intergenic -5231 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-9 chr4 114909334 114909669 + 0.713635438203849 NA promoter-TSS (NM_008593) promoter-TSS (NM_008593) 212 NR_030721 100040736 Mm.231287 NR_030721 ENSMUSG00000085399 Foxd2os 9130206I24Rik forkhead box D2, opposite strand ncRNA unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-7 chr15 7838467 7838771 + 0.713635438203849 NA Intergenic Intergenic 23069 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-12 chr7 51914150 51914628 + 0.713635438203849 NA intron (NM_001330607, intron 3 of 7) intron (NM_001330607, intron 3 of 7) 35422 NM_001330607 14453 Mm.207360 NM_008087 ENSMUSG00000030498 Gas2 Gas-2 growth arrest specific 2 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-12 chr2 75704829 75705232 + 0.713635438203849 NA promoter-TSS (NM_010902) promoter-TSS (NM_010902) -367 NM_010902 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-6 chr19 3388976 3389225 + 0.713635438203849 NA promoter-TSS (NM_001286557) promoter-TSS (NM_001286557) 243 NM_001039657 17771 Mm.209941 NM_010841 ENSMUSG00000024905 Tesmin Mtl5 testis expressed metallothionein like protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-4 chr13 52223240 52223643 + 0.713635438203849 NA Intergenic Intergenic 126700 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-8 chr3 19426536 19426817 + 0.713635438203849 NA Intergenic Intergenic -81919 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-17 chr3 122316968 122317267 + 0.713635438203849 NA Intergenic Intergenic -23414 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-3 chr10 99267603 99268046 + 0.713635438203849 NA TTS (NM_026268) TTS (NM_026268) 4593 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-4 chr11 113056846 113057262 + 0.713635438203849 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 144784 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-4 chr13 15465053 15465339 + 0.713635438203849 NA intron (NM_008130, intron 1 of 14) intron (NM_008130, intron 1 of 14) 1473 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-3 chr11 120311127 120311548 + 0.713635438203849 NA Intergenic Intergenic 36076 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-9 chr2 127208452 127208861 + 0.713635438203849 NA promoter-TSS (NM_198630) promoter-TSS (NM_198630) 252 NM_177214 320632 Mm.215860 NM_177214 ENSMUSG00000003660 Snrnp200 A330064G03Rik|Ascc3l1|BC011390|HELIC2|U5-200-KD|U5-200KD small nuclear ribonucleoprotein 200 (U5) protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-9 chr5 32160224 32160597 + 0.713635438203849 NA Intergenic Intergenic 23938 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849 chr1 172134093 172134407 + 0.713635438203849 NA exon (NM_001159525, exon 6 of 6) exon (NM_001159525, exon 6 of 6) 7495 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-10 chr4 136431776 136432180 + 0.713635438203849 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 7366 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-4 chr11 32564691 32564968 + 0.713635438203849 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 31563 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-12 chr5 88912227 88912583 + 0.713635438203849 NA intron (NM_001359211, intron 1 of 26) intron (NM_001359211, intron 1 of 26) 25145 NM_018760 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-13 chr6 137142403 137142857 + 0.713635438203849 NA intron (NM_181988, intron 2 of 4) intron (NM_181988, intron 2 of 4) 27088 NM_001164214 232441 Mm.46233 NM_181988 ENSMUSG00000030222 Rerg - RAS-like, estrogen-regulated, growth-inhibitor protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-13 chr5 151068092 151068489 + 0.713635438203849 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 115683 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-11 chr6 120144834 120145364 + 0.713635438203849 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -48724 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_25_13_0.618183252397509_4.11644654825636_0.713635438203849-5 chr8 94705956 94706166 + 0.713635438203849 NA Intergenic Intergenic -9819 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-10 chr7 83892595 83892819 + 0.713635438203849 NA intron (NM_023403, intron 1 of 2) intron (NM_023403, intron 1 of 2) 707 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesd 2210015O11Rik|AW537813|Mesdc2|mKIAA0081|mesd|msd mesoderm development LRP chaperone protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-17 chr8 117358150 117358624 + 0.713635438203849 NA intron (NM_028941, intron 1 of 20) intron (NM_028941, intron 1 of 20) 9217 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-11 chr5 107994813 107995308 + 0.713635438203849 NA Intergenic Intergenic -7983 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-6 chr17 15511164 15511841 + 0.713635438203849 NA intron (NM_013684, intron 4 of 7) intron (NM_013684, intron 4 of 7) 11614 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-11 chr3 101513227 101513637 + 0.713635438203849 NA Intergenic Intergenic 91275 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-2 chr2 131160317 131160514 + 0.713635438203849 NA promoter-TSS (NM_026091) promoter-TSS (NM_026091) -334 NM_026091 67326 Mm.27711 NM_026091 ENSMUSG00000027327 1700037H04Rik - RIKEN cDNA 1700037H04 gene protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-18 chr6 7676652 7677051 + 0.713635438203849 NA intron (NM_012055, intron 9 of 11) intron (NM_012055, intron 9 of 11) 16331 NM_012055 27053 Mm.2942 NM_012055 ENSMUSG00000029752 Asns - asparagine synthetase protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-2 chr11 116102075 116102407 + 0.713635438203849 NA Intergenic Tigger16a|DNA|TcMar-Tigger 7994 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-11 chr8 111724802 111725016 + 0.713635438203849 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 7227 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-12 chr5 137099811 137100279 + 0.713635438203849 NA Intergenic (TAA)n|Simple_repeat|Simple_repeat 16162 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_25_13_0.618183252397509_4.11644654825636_0.713635438203849-4 chr7 130968369 130968590 + 0.713635438203849 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 32276 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-16 chr7 144339625 144340099 + 0.713635438203849 NA intron (NM_001081370, intron 2 of 10) intron (NM_001081370, intron 2 of 10) 55477 NM_001081370 210274 Mm.483624 NM_001081370 ENSMUSG00000037541 Shank2 ProSAP1|mKIAA1022 SH3 and multiple ankyrin repeat domains 2 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-9 chr15 58872264 58872528 + 0.713635438203849 NA promoter-TSS (NM_026642) promoter-TSS (NM_026642) -253 NM_026642 68260 Mm.278805 NM_026642 ENSMUSG00000037085 Trmt12 4632406N01Rik|AI449275|Tyw2 tRNA methyltranferase 12 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-14 chr9 45828201 45828479 + 0.713635438203849 NA intron (NM_001081373, intron 1 of 29) intron (NM_001081373, intron 1 of 29) 298 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-5 chr11 116820580 116820940 + 0.713635438203849 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 7286 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak2_25_13_0.618183252397509_4.11644654825636_0.713635438203849 chr1 165459931 165460189 + 0.713635438203849 NA intron (NM_028759, intron 1 of 18) CpG 403 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849 chr1 21079476 21079858 + 0.713635438203849 NA promoter-TSS (NM_177409) promoter-TSS (NM_177409) -442 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-19 chr8 126797273 126797477 + 0.713635438203849 NA Intergenic Intergenic -51645 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-15 chr8 57799662 57799948 + 0.713635438203849 NA intron (NM_175032, intron 10 of 11) intron (NM_175032, intron 10 of 11) -146750 NM_144731 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849 chr11 97428456 97428744 + 0.713635438203849 NA Intergenic Intergenic -21560 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-3 chr2 163813994 163814249 + 0.713635438203849 NA Intergenic Intergenic -6713 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-6 chr13 74765422 74765956 + 0.713635438203849 NA intron (NM_001301153, intron 3 of 31) intron (NM_001301153, intron 3 of 31) 5047 NM_001301156 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-2 chr1 34128308 34128674 + 0.713635438203849 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 11132 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-10 chr3 22090878 22091285 + 0.713635438203849 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 14429 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-10 chr2 148743759 148744140 + 0.713635438203849 NA Intergenic Intergenic -6412 NM_001362207 228756 Mm.189390 NM_177655 ENSMUSG00000055177 Cstl1 RCET1|RCET2|RCET3 cystatin-like 1 protein-coding unique_peak1_15_21_-0.729391574419501_4.09473583142755_0.713635438203849 chr2 35201423 35201743 + 0.713635438203849 NA promoter-TSS (NM_026697) promoter-TSS (NM_026697) -463 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-20 chr7 15967193 15967492 + 0.713635438203849 NA intron (NM_153068, intron 1 of 5) intron (NM_153068, intron 1 of 5) 193 NM_153068 259300 Mm.138215 NM_153068 ENSMUSG00000074364 Ehd2 BC027084|C130052H20Rik EH-domain containing 2 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-3 chr11 35916080 35916588 + 0.713635438203849 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 63755 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-15 chr3 52539024 52539424 + 0.713635438203849 NA intron (NR_153344, intron 1 of 4) intron (NR_153344, intron 1 of 4) 22260 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-5 chr13 45941530 45941783 + 0.713635438203849 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 23335 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-16 chr9 58454241 58454509 + 0.713635438203849 NA promoter-TSS (NR_040736) promoter-TSS (NR_040736) -798 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-15 chr7 5015483 5016073 + 0.713635438203849 NA intron (NM_025324, intron 1 of 1) CpG 270 NM_025324 66056 Mm.19974 NM_025324 ENSMUSG00000051184 Zfp524 0610012F07Rik|2300009P13Rik|Znf524 zinc finger protein 524 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-18 chr8 121646915 121647447 + 0.713635438203849 NA intron (NM_080855, intron 1 of 12) B3|SINE|B2 4752 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-7 chr16 30884977 30885334 + 0.713635438203849 NA Intergenic Intergenic 196277 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-3 chr11 88973950 88974145 + 0.713635438203849 NA exon (NM_016706, exon 1 of 7) exon (NM_016706, exon 1 of 7) 112 NM_016706 12812 Mm.268004 NM_016706 ENSMUSG00000033983 Coil C79982|Cln80|p80|p80-coilin coilin protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-2 chr10 128338163 128338449 + 0.713635438203849 NA intron (NM_026444, intron 1 of 10) intron (NM_026444, intron 1 of 10) 579 NM_026444 12974 Mm.58836 NM_026444 ENSMUSG00000005683 Cs 2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis citrate synthase protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-3 chr1 134955500 134955909 + 0.713635438203849 NA exon (NM_001081307, exon 1 of 24) exon (NM_001081307, exon 1 of 24) 236 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-16 chr3 79886851 79887269 + 0.713635438203849 NA exon (NM_133187, exon 1 of 4) exon (NM_133187, exon 1 of 4) 1130 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849 chr1 105433316 105433757 + 0.713635438203849 NA Intergenic Intergenic -76826 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-4 chr11 79307253 79307584 + 0.713635438203849 NA Intergenic Intergenic -32474 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-7 chr15 102970687 102970891 + 0.713635438203849 NA intron (NM_010462, intron 1 of 1) intron (NM_010462, intron 1 of 1) -2561 NR_029722 723958 NR_029722 ENSMUSG00000065488 Mir196a-2 Mirn196a-2|mir-196a-2 microRNA 196a-2 ncRNA common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-12 chr5 139731039 139731331 + 0.713635438203849 NA intron (NM_174850, intron 1 of 16) intron (NM_174850, intron 1 of 16) 5148 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849 chr1 192076872 192077082 + 0.713635438203849 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 15622 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-7 chr14 25535791 25536086 + 0.713635438203849 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) 1499 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-14 chr7 3289098 3289483 + 0.713635438203849 NA 5' UTR (NM_001093764, exon 1 of 3) 5' UTR (NM_001093764, exon 1 of 3) 252 NM_001093764 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-13 chr7 44986919 44987122 + 0.713635438203849 NA promoter-TSS (NM_019830) promoter-TSS (NM_019830) 120 NR_045266 100502630 Mm.490013 NR_045266 ENSMUSG00000087138 Gm15545 - predicted gene 15545 ncRNA common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-4 chr13 34370765 34371007 + 0.713635438203849 NA Intergenic Intergenic -25704 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-10 chr16 45090474 45090753 + 0.713635438203849 NA Intergenic Intergenic -3398 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak2_25_13_0.618183252397509_4.11644654825636_0.713635438203849 chr11 106659367 106659589 + 0.713635438203849 NA intron (NM_001032378, intron 13 of 13) intron (NM_001032378, intron 13 of 13) -46548 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-8 chr17 22314589 22314816 + 0.713635438203849 NA intron (NM_001357992, intron 1 of 5) intron (NM_001357992, intron 1 of 5) 140 NM_001357992 631624 Mm.440794 NM_001357991 Gm7072 EG631624 predicted gene 7072 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-10 chr3 49094641 49094865 + 0.713635438203849 NA Intergenic Intergenic -485653 NR_003617 66332 Mm.46124 NM_025493 1700018B24Rik - enhancer of rudimentary homolog pseudogene pseudo unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-22 chr8 4838273 4838581 + 0.713635438203849 NA Intergenic Intergenic -58860 NM_011369 20419 Mm.37801 NM_011369 ENSMUSG00000022322 Shcbp1 mPAL Shc SH2-domain binding protein 1 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-8 chr3 19895084 19895372 + 0.713635438203849 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 357 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-13 chr2 84557563 84557975 + 0.713635438203849 NA Intergenic Intergenic -50896 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-6 chr13 70733285 70733645 + 0.713635438203849 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -95831 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-3 chr12 85049576 85049868 + 0.713635438203849 NA exon (NM_178363, exon 14 of 21) exon (NM_178363, exon 14 of 21) 45893 NM_001361239 73422 Mm.311944 NM_175198 ENSMUSG00000042320 Prox2 1700058C01Rik prospero homeobox 2 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-13 chr5 137350269 137350642 + 0.713635438203849 NA 5' UTR (NM_001159571, exon 1 of 17) 5' UTR (NM_001159571, exon 1 of 17) 346 NM_010144 13846 Mm.34533 NM_010144 ENSMUSG00000029710 Ephb4 AI042935|Htk|MDK2|Myk1|Tyro11|b2b2412Clo Eph receptor B4 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-8 chr15 10671517 10671928 + 0.713635438203849 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 41818 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-14 chr7 84520908 84521254 + 0.713635438203849 NA Intergenic Intergenic -7873 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-7 chr2 30067213 30067493 + 0.713635438203849 NA intron (NM_001204875, intron 1 of 7) CpG 879 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-5 chr15 78806345 78806591 + 0.713635438203849 NA Intergenic Intergenic -3426 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-7 chr19 7425645 7426002 + 0.713635438203849 NA TTS (NM_175381) TTS (NM_175381) 3250 NR_105957 102466781 NR_105957 ENSMUSG00000098293 Mir6991 Gm27966|mmu-mir-6991 microRNA 6991 ncRNA unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-5 chr14 25768500 25768974 + 0.713635438203849 NA exon (NM_001101433, exon 1 of 4) exon (NM_001101433, exon 1 of 4) 119 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849 chr1 58576603 58577224 + 0.713635438203849 NA intron (NM_001310598, intron 1 of 12) intron (NM_001310598, intron 1 of 12) 9241 NM_001310599 213056 Mm.26272 NM_172513 ENSMUSG00000038174 Fam126b C130065N10Rik|D1Ertd53e|D630010C10 family with sequence similarity 126, member B protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-5 chr15 66732519 66732783 + 0.713635438203849 NA intron (NM_009375, intron 27 of 47) intron (NM_009375, intron 27 of 47) 61881 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-5 chr12 27432825 27433336 + 0.713635438203849 NA Intergenic Intergenic -90362 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-11 chr5 3322488 3323016 + 0.713635438203849 NA Intergenic B2_Mm2|SINE|B2 -21141 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-2 chr10 30618607 30618870 + 0.713635438203849 NA promoter-TSS (NM_025798) promoter-TSS (NM_025798) -372 NM_025798 66847 Mm.46218 NM_025798 ENSMUSG00000019791 Hint3 0610010I17Rik|AV009015|HINT-3|HINT-4|HINT4 histidine triad nucleotide binding protein 3 protein-coding common_peak1_15_21_-0.729391574419501_4.09473583142755_0.713635438203849 chr16 13610875 13611112 + 0.713635438203849 NA intron (NM_001358453, intron 17 of 22) intron (NM_001358453, intron 17 of 22) 57177 NM_001358452 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-9 chr3 38383167 38383471 + 0.713635438203849 NA Intergenic Intergenic 101497 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-9 chr2 137423090 137423377 + 0.713635438203849 NA Intergenic Intergenic -306713 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-10 chr6 72292835 72293168 + 0.713635438203849 NA Intergenic MLTR73|LTR|ERV1 -11609 NM_001282071 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-11 chr4 59374715 59374942 + 0.713635438203849 NA intron (NM_001163288, intron 8 of 16) intron (NM_001163288, intron 8 of 16) 63805 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding unique_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-8 chr3 58316038 58316312 + 0.713635438203849 NA Intergenic Intergenic -98545 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-2 chr10 96829264 96829770 + 0.713635438203849 NA Intergenic Intergenic -206251 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-21 chr7 144036584 144036849 + 0.713635438203849 NA Intergenic Intergenic 27462 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-5 chr12 81594661 81594888 + 0.713635438203849 NA intron (NM_001347386, intron 1 of 8) intron (NM_001347386, intron 1 of 8) 234 NM_001347385 69792 Mm.279993 NM_027213 ENSMUSG00000002679 Med6 1500012F11Rik|AU019660|AV213303 mediator complex subunit 6 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-2 chr10 59322866 59323102 + 0.713635438203849 NA promoter-TSS (NM_001316371) promoter-TSS (NM_001316371) -312 NM_001316371 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-6 chr15 80218835 80219224 + 0.713635438203849 NA Intergenic Intergenic -15051 NM_001357659 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-14 chr2 165880504 165880911 + 0.713635438203849 NA intron (NM_001252587, intron 1 of 11) intron (NM_001252587, intron 1 of 11) 1571 NM_001281926 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-15 chr9 47446350 47446673 + 0.713635438203849 NA Intergenic Intergenic -83659 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-8 chr2 152396842 152397225 + 0.713635438203849 NA exon (NM_011438, exon 1 of 1) exon (NM_011438, exon 1 of 1) 1013 NM_011438 20667 Mm.28424 NM_011438 ENSMUSG00000051817 Sox12 2010205A02Rik SRY (sex determining region Y)-box 12 protein-coding unique_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849 chr15 85641317 85641693 + 0.713635438203849 NA Intergenic Intergenic -59684 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-7 chr17 71598384 71598686 + 0.713635438203849 NA promoter-TSS (NR_027953) promoter-TSS (NR_027953) 226 NR_015549 68789 Mm.75202 NR_015549 ENSMUSG00000085492 Trmt61b 1110039F03Rik|623451|Gm6431 tRNA methyltransferase 61B ncRNA common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-6 chr15 99803674 99804234 + 0.713635438203849 NA intron (NM_001113545, intron 6 of 10) intron (NM_001113545, intron 6 of 10) 16195 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-4 chr12 59012231 59012487 + 0.713635438203849 NA promoter-TSS (NM_009147) promoter-TSS (NM_009147) -342 NM_001361956 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding unique_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-19 chr6 33872617 33872958 + 0.713635438203849 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -156661 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak1_24_13_0.561998919667948_4.08835438189158_0.713635438203849-12 chr4 134922929 134923148 + 0.713635438203849 NA promoter-TSS (NM_023665) promoter-TSS (NM_023665) -587 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding common_peak2_25_13_0.618183252397509_4.11644654825636_0.713635438203849-3 chr19 24698502 24698821 + 0.713635438203849 NA intron (NM_175013, intron 10 of 10) intron (NM_175013, intron 10 of 10) 24653 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak1_25_13_0.618183252397509_4.11644654825636_0.713635438203849-3 chr10 76033147 76033632 + 0.713635438203849 NA intron (NM_177475, intron 1 of 1) ID|SINE|ID 777 NM_177475 64453 Mm.80609 NM_177475 ENSMUSG00000049764 Zfp280b D10Jhu82e|Suhw2 zinc finger protein 280B protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-6 chr14 54259530 54259776 + 0.713635438203849 NA intron (NM_134076, intron 1 of 6) intron (NM_134076, intron 1 of 6) 421 NM_134076 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding common_peak2_25_13_0.618183252397509_4.11644654825636_0.713635438203849-2 chr17 13008055 13008278 + 0.713635438203849 NA intron (NM_013671, intron 1 of 4) CpG 327 NM_013671 20656 Mm.290876 NM_013671 ENSMUSG00000006818 Sod2 MnSOD|Sod-2 superoxide dismutase 2, mitochondrial protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-9 chr4 11828294 11828718 + 0.713635438203849 NA Intergenic MIR|SINE|MIR 70349 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-2 chr10 62980311 62980545 + 0.713635438203849 NA intron (NM_027425, intron 1 of 17) CpG 205 NM_027425 70432 Mm.234587 NM_027425 ENSMUSG00000020070 Rufy2 2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13 RUN and FYVE domain-containing 2 protein-coding common_peak2_24_13_0.561998919667948_4.08835438189158_0.713635438203849-14 chr7 139271745 139272054 + 0.713635438203849 NA Intergenic Intergenic 23417 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_15_21_-0.729391574419501_4.09473583142755_0.713635438203849-15 chr9 62838938 62839249 + 0.713635438203849 NA intron (NM_001033175, intron 1 of 6) intron (NM_001033175, intron 1 of 6) 306 NM_001033175 76524 Mm.283636 NM_001033175 ENSMUSG00000032245 Cln6 1810065L06Rik|AW743417|D9Bwg1455e|nclf ceroid-lipofuscinosis, neuronal 6 protein-coding common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887 chr13 91929552 91929939 + 0.713114929964887 NA intron (NM_009027, intron 5 of 14) intron (NM_009027, intron 5 of 14) -52860 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding common_peak1_20_26_-0.635297826570844_4.43723858887805_0.713114929964887 chr1 43222134 43222563 + 0.713114929964887 NA Intergenic Intergenic -25587 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-4 chr17 73575532 73576219 + 0.713114929964887 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 134576 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-3 chr17 57032377 57032714 + 0.713114929964887 NA TTS (NM_175333) TTS (NM_175333) -1038 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-3 chr18 4758259 4758757 + 0.713114929964887 NA Intergenic Intergenic -53978 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA common_peak1_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-6 chr5 105798114 105798393 + 0.713114929964887 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -78315 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-2 chr13 114446983 114447360 + 0.713114929964887 NA Intergenic Intergenic 11780 NM_001301373 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-13 chr5 36978680 36978913 + 0.713114929964887 NA intron (NM_011716, intron 2 of 7) intron (NM_011716, intron 2 of 7) 10186 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding unique_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-6 chr9 67124142 67124420 + 0.713114929964887 NA Intergenic Intergenic -9280 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-8 chr3 79993913 79994474 + 0.713114929964887 NA Intergenic Intergenic 108263 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_31_17_0.553060063202239_4.44645503304343_0.713114929964887 chr1 161734577 161734929 + 0.713114929964887 NA Intergenic Intergenic 53742 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_31_17_0.553060063202239_4.44645503304343_0.713114929964887-2 chr13 15661182 15661428 + 0.713114929964887 NA intron (NM_008130, intron 9 of 14) intron (NM_008130, intron 9 of 14) 141325 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-2 chr1 132312935 132313448 + 0.713114929964887 NA Intergenic Intergenic -2934 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-16 chr7 25783538 25783773 + 0.713114929964887 NA intron (NM_009465, intron 4 of 19) intron (NM_009465, intron 4 of 19) 5078 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-9 chr3 89392884 89393153 + 0.713114929964887 NA promoter-TSS (NM_001355211) promoter-TSS (NM_001355211) 360 NM_009565 22724 Mm.262184 NM_009565 ENSMUSG00000028042 Zbtb7b Thpok|Zfp67|c-Krox zinc finger and BTB domain containing 7B protein-coding unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-7 chr9 92252781 92253513 + 0.713114929964887 NA intron (NM_011636, intron 1 of 8) intron (NM_011636, intron 1 of 8) 2953 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887 chr1 70079321 70079726 + 0.713114929964887 NA intron (NM_025728, intron 2 of 7) intron (NM_025728, intron 2 of 7) 127908 NM_025728 66722 Mm.440554 NM_025728 ENSMUSG00000053153 Spag16 4921511D23Rik|4930524F24Rik|4930585K05Rik|AV261009|Pf20|Wdr29 sperm associated antigen 16 protein-coding common_peak1_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-3 chr8 120071429 120071676 + 0.713114929964887 NA Intergenic Intergenic 29920 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-7 chrX 56677311 56677759 + 0.713114929964887 NA Intergenic Intergenic -54226 NM_010211 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-2 chr13 46841747 46842221 + 0.713114929964887 NA intron (NM_010617, intron 4 of 37) intron (NM_010617, intron 4 of 37) 87734 NM_010617 16553 Mm.342703 NM_010617 ENSMUSG00000021375 Kif13a 4930505I07Rik|mKIAA4109 kinesin family member 13A protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-11 chr4 116052944 116053302 + 0.713114929964887 NA intron (NM_028142, intron 1 of 5) intron (NM_028142, intron 1 of 5) 753 NM_028142 72181 Mm.282560 NM_028142 ENSMUSG00000028706 Nsun4 2310010O12Rik|2810405F18Rik|AI507900|Shtap NOL1/NOP2/Sun domain family, member 4 protein-coding common_peak1_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-2 chr12 12941451 12941658 + 0.713114929964887 NA intron (NM_008709, intron 1 of 2) CpG 282 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding unique_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887 chr13 113580030 113580599 + 0.713114929964887 NA Intergenic Intergenic 38250 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding unique_peak2_30_17_0.507579517683714_4.42371476028417_0.713114929964887 chr11 99472250 99472530 + 0.713114929964887 NA Intergenic Intergenic 20720 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-5 chr2 163815217 163815522 + 0.713114929964887 NA Intergenic Intergenic -5465 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-3 chr11 95070123 95070658 + 0.713114929964887 NA intron (NM_013565, intron 1 of 25) intron (NM_013565, intron 1 of 25) -1192 NM_001306071 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-7 chr4 64047321 64047576 + 0.713114929964887 NA promoter-TSS (NM_011607) promoter-TSS (NM_011607) -433 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-5 chr7 84195875 84196267 + 0.713114929964887 NA Intergenic Intergenic -44178 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-2 chr11 76027464 76027713 + 0.713114929964887 NA exon (NM_029658, exon 1 of 3) exon (NM_029658, exon 1 of 3) 194 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-5 chr2 24479128 24479613 + 0.713114929964887 NA Intergenic Intergenic -3771 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-2 chr13 75798030 75798396 + 0.713114929964887 NA Intergenic Intergenic -41672 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-3 chr10 62980285 62980631 + 0.713114929964887 NA intron (NM_027425, intron 1 of 17) CpG 235 NM_027425 70432 Mm.234587 NM_027425 ENSMUSG00000020070 Rufy2 2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13 RUN and FYVE domain-containing 2 protein-coding unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-4 chr14 27047992 27048494 + 0.713114929964887 NA intron (NM_134437, intron 1 of 12) intron (NM_134437, intron 1 of 12) 9242 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-7 chrX 74023461 74023782 + 0.713114929964887 NA promoter-TSS (NR_039594) promoter-TSS (NR_039594) -23 NR_039594 100628601 NR_039594 ENSMUSG00000092907 Mir5132 mir-5132|mmu-mir-5132|mu-mir-5132 microRNA 5132 ncRNA unique_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-3 chr3 121604309 121604680 + 0.713114929964887 NA Intergenic Intergenic 38991 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-6 chr3 7366400 7366793 + 0.713114929964887 NA promoter-TSS (NM_008862) promoter-TSS (NM_008862) -8 NM_008862 18767 Mm.3193 NM_008862 ENSMUSG00000027499 Pkia AI415001|PKIalpha protein kinase inhibitor, alpha protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-2 chr10 37337114 37337405 + 0.713114929964887 NA Intergenic Intergenic -198333 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-14 chr6 55180559 55181002 + 0.713114929964887 NA Intergenic Intergenic -5790 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887 chr1 191312665 191313116 + 0.713114929964887 NA intron (NM_025424, intron 1 of 3) intron (NM_025424, intron 1 of 3) 5228 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak2_30_17_0.507579517683714_4.42371476028417_0.713114929964887-4 chr7 44748525 44748777 + 0.713114929964887 NA promoter-TSS (NM_178734) promoter-TSS (NM_178734) 22 NM_133945 101568 Mm.28816 NM_133945 ENSMUSG00000002205 Vrk3 AI428238 vaccinia related kinase 3 protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-10 chr3 126660416 126660750 + 0.713114929964887 NA intron (NM_001025438, intron 2 of 18) intron (NM_001025438, intron 2 of 18) 63632 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_30_17_0.507579517683714_4.42371476028417_0.713114929964887-3 chr2 163658502 163658832 + 0.713114929964887 NA intron (NM_001164053, intron 1 of 3) CpG 209 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-5 chr3 123122964 123123325 + 0.713114929964887 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) -88157 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak1_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-3 chr13 55464308 55464720 + 0.713114929964887 NA intron (NM_001030296, intron 1 of 2) CpG 247 NM_001030296 432763 Mm.315457 NM_001030296 ENSMUSG00000034686 Prr7 XM_484263 proline rich 7 (synaptic) protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-7 chr3 68509026 68509313 + 0.713114929964887 NA intron (NM_001113421, intron 2 of 7) intron (NM_001113421, intron 2 of 7) 14988 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-5 chr4 53011859 53012129 + 0.713114929964887 NA exon (NM_001347099, exon 1 of 5) exon (NM_001347099, exon 1 of 5) 114 NM_025623 66536 Mm.38244 NM_025623 ENSMUSG00000015247 Nipsnap3b 2700063N13Rik|Nipsnap3a nipsnap homolog 3B protein-coding unique_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-3 chr14 70336160 70336597 + 0.713114929964887 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 12055 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_31_17_0.553060063202239_4.44645503304343_0.713114929964887-3 chr18 84675005 84675272 + 0.713114929964887 NA exon (NM_001289531, exon 5 of 11) exon (NM_001289531, exon 5 of 11) 6921 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-17 chr8 105515011 105515314 + 0.713114929964887 NA Intergenic Intergenic -3584 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-7 chr7 89610924 89611257 + 0.713114929964887 NA Intergenic Intergenic -21728 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak2_30_17_0.507579517683714_4.42371476028417_0.713114929964887-5 chr9 15045120 15045491 + 0.713114929964887 NA 5' UTR (NM_019482, exon 1 of 5) 5' UTR (NM_019482, exon 1 of 5) 173 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-5 chr2 26503271 26503621 + 0.713114929964887 NA promoter-TSS (NR_132655) promoter-TSS (NR_132655) 376 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-2 chr1 177441405 177441775 + 0.713114929964887 NA promoter-TSS (NM_001355101) promoter-TSS (NM_001355101) -761 NM_001355099 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238.|zfp-238 zinc finger and BTB domain containing 18 protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887 chr10 24366904 24367341 + 0.713114929964887 NA Intergenic Intergenic 143605 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-6 chr8 121668443 121668801 + 0.713114929964887 NA Intergenic Intergenic -16689 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-3 chr13 99150902 99151470 + 0.713114929964887 NA Intergenic Intergenic -33637 NM_001004149 238803 Mm.343207 NM_001004149 ENSMUSG00000050919 Zfp366 DC-SCRIPT|Znf366 zinc finger protein 366 protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-4 chr3 121705684 121706163 + 0.713114929964887 NA Intergenic Intergenic -17614 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-4 chr18 60747137 60747347 + 0.713114929964887 NA promoter-TSS (NM_001348101) promoter-TSS (NM_001348101) -496 NM_001348101 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-4 chr2 117670191 117670544 + 0.713114929964887 NA Intergenic Intergenic 142435 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887 chr11 5893778 5894329 + 0.713114929964887 NA Intergenic Intergenic 4729 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-3 chr3 79880844 79881359 + 0.713114929964887 NA Intergenic Intergenic -4829 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-2 chr14 30560692 30561091 + 0.713114929964887 NA intron (NM_009388, intron 4 of 13) intron (NM_009388, intron 4 of 13) -11258 NR_037237 100526475 NR_037237 ENSMUSG00000093156 Mir3076 mir-3076|mmu-mir-3076 microRNA 3076 ncRNA unique_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-5 chr2 166786077 166786707 + 0.713114929964887 NA Intergenic Intergenic -7375 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-12 chr4 153974451 153974921 + 0.713114929964887 NA promoter-TSS (NM_177673) promoter-TSS (NM_177673) 395 NM_007859 13368 Mm.388918 NM_007859 ENSMUSG00000029027 Dffb 40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff DNA fragmentation factor, beta subunit protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-8 chr8 54553602 54554072 + 0.713114929964887 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 3506 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding unique_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-4 chr5 93152162 93152605 + 0.713114929964887 NA intron (NM_001009818, intron 3 of 9) intron (NM_001009818, intron 3 of 9) 54112 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-5 chr2 3134469 3134930 + 0.713114929964887 NA intron (NM_001347067, intron 1 of 7) B4A|SINE|B4 16014 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding unique_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887 chr11 115828514 115828990 + 0.713114929964887 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 4694 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_19_26_-0.705190559191794_4.40229222256757_0.713114929964887 chr10 122890866 122891337 + 0.713114929964887 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 94623 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-2 chr15 59481936 59482342 + 0.713114929964887 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) 107941 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-15 chr6 134699983 134700317 + 0.713114929964887 NA intron (NM_001170479, intron 3 of 3) intron (NM_001170479, intron 3 of 3) 59210 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-6 chrX 12078589 12078995 + 0.713114929964887 NA intron (NM_001168321, intron 1 of 13) CpG 1761 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_30_17_0.507579517683714_4.42371476028417_0.713114929964887-2 chr19 18890753 18890985 + 0.713114929964887 NA intron (NM_153417, intron 38 of 38) intron (NM_153417, intron 38 of 38) 110248 NM_146095 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding unique_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-4 chr16 5134888 5135596 + 0.713114929964887 NA Intergenic Intergenic -2761 NM_008909 19041 Mm.266875 NM_008909 ENSMUSG00000039457 Ppl AW553870 periplakin protein-coding common_peak2_30_17_0.507579517683714_4.42371476028417_0.713114929964887 chr15 5145432 5145637 + 0.713114929964887 NA intron (NM_001013367, intron 1 of 8) intron (NM_001013367, intron 1 of 8) 1673 NM_001355640 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak1_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-4 chr17 79743742 79744145 + 0.713114929964887 NA Intergenic Intergenic -28902 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-4 chr19 59466472 59466865 + 0.713114929964887 NA Intergenic Intergenic 7978 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak2_31_17_0.553060063202239_4.44645503304343_0.713114929964887-4 chr7 141474210 141474494 + 0.713114929964887 NA promoter-TSS (NM_053082) promoter-TSS (NM_053082) 801 NM_025593 66491 Mm.380115 NM_025593 ENSMUSG00000038489 Polr2l 2510029B14Rik polymerase (RNA) II (DNA directed) polypeptide L protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-18 chrX 73464613 73465075 + 0.713114929964887 NA Intergenic Intergenic -5815 NM_207104 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding common_peak2_19_26_-0.705190559191794_4.40229222256757_0.713114929964887-6 chr3 87617098 87617347 + 0.713114929964887 NA promoter-TSS (NM_001003912) promoter-TSS (NM_001003912) -337 NM_001360197 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding unique_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887 chr1 36061757 36062435 + 0.713114929964887 NA Intergenic Intergenic -6304 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_30_17_0.507579517683714_4.42371476028417_0.713114929964887-6 chr8 84241210 84241608 + 0.713114929964887 NA Intergenic Intergenic -4367 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-6 chr4 134000498 134000903 + 0.713114929964887 NA intron (NM_026144, intron 1 of 8) intron (NM_026144, intron 1 of 8) 164 NM_026144 67422 Mm.100290 NM_026144 ENSMUSG00000012117 Dhdds 3222401G21Rik|CIT|DS|HDS|W91638 dehydrodolichyl diphosphate synthase protein-coding common_peak1_31_17_0.553060063202239_4.44645503304343_0.713114929964887-6 chr2 157411616 157411917 + 0.713114929964887 NA Intergenic Intergenic -12527 NM_009271 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak2_20_26_-0.635297826570844_4.43723858887805_0.713114929964887-5 chr15 10712094 10712475 + 0.713114929964887 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 1256 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_62_67_-0.394092543003505_5.89041656974859_0.712696723931505-2 chr14 20702811 20703463 + 0.712696723931505 NA promoter-TSS (NR_029446) promoter-TSS (NR_029446) -38 NR_029446 76133 Mm.436043 NR_029446 ENSMUSG00000097577 6230400D17Rik - RIKEN cDNA 6230400D17 gene ncRNA common_peak2_62_67_-0.394092543003505_5.89041656974859_0.712696723931505 chr12 111038270 111039147 + 0.712696723931505 NA Intergenic CpG -1090 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak2_62_67_-0.394092543003505_5.89041656974859_0.712696723931505-3 chr19 8953914 8954410 + 0.712696723931505 NA intron (NM_197993, intron 1 of 8) intron (NM_197993, intron 1 of 8) 330 NM_197993 70044 Mm.165979 NM_197993 ENSMUSG00000071645 Tut1 2700038E08Rik|PAPD2|Rbm21|TUTase6|U6-TUTase|star-PAP terminal uridylyl transferase 1, U6 snRNA-specific protein-coding common_peak1_81_52_0.343039113037239_5.89944001108182_0.712696723931493 chr1 75236548 75237338 + 0.712696723931493 NA exon (NM_001159885, exon 1 of 9) exon (NM_001159885, exon 1 of 9) 241 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak1_81_52_0.343039113037239_5.89944001108182_0.712696723931493-5 chr9 88482397 88483460 + 0.712696723931493 NA promoter-TSS (NM_019796) promoter-TSS (NM_019796) -531 NM_001284328 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak1_81_52_0.343039113037239_5.89944001108182_0.712696723931493-3 chr11 40733906 40734705 + 0.712696723931493 NA promoter-TSS (NM_013552) promoter-TSS (NM_013552) 644 NM_001290697 52653 Mm.276504 NM_026023 ENSMUSG00000020328 Nudcd2 - NudC domain containing 2 protein-coding common_peak2_81_52_0.343039113037239_5.89944001108182_0.712696723931493 chr6 128349377 128350141 + 0.712696723931493 NA intron (NM_011657, intron 1 of 10) intron (NM_011657, intron 1 of 10) 6092 NM_011657 22158 Mm.291783 NM_011657 ENSMUSG00000001521 Tulp3 2310022L06Rik|AI316887 tubby-like protein 3 protein-coding common_peak1_81_52_0.343039113037239_5.89944001108182_0.712696723931493-4 chr3 108200547 108201445 + 0.712696723931493 NA promoter-TSS (NM_028061) promoter-TSS (NM_028061) -162 NM_001081320 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding common_peak1_81_52_0.343039113037239_5.89944001108182_0.712696723931493-2 chr10 7662855 7663919 + 0.712696723931493 NA promoter-TSS (NR_030698) promoter-TSS (NR_030698) 16 NR_030698 320642 Mm.398806 NR_030698 A630066F11Rik - RIKEN cDNA A630066F11 gene ncRNA common_peak1_154_106_0.24158447233227_6.86225922256728_0.712583665781375 chr11 78370628 78372291 + 0.712583665781375 NA intron (NM_008238, intron 2 of 8) intron (NM_008238, intron 2 of 8) 15149 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak2_154_106_0.24158447233227_6.86225922256728_0.712583665781375 chr19 4213075 4213551 + 0.712583665781375 NA promoter-TSS (NM_001310038) promoter-TSS (NM_001310038) -925 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak1_155_106_0.250796831134934_6.86686540196861_0.712583665781375 chr2 103795853 103796959 + 0.712583665781375 NA intron (NM_001111292, intron 1 of 16) intron (NM_001111292, intron 1 of 16) 672 NM_001111290 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak2_468_343_0.14283735336593_8.49768343138506_0.712377805834652 chr8 68118829 68121679 + 0.712377805834652 NA Intergenic Intergenic -145680 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_128_86_0.277079657014915_6.58148332435618_0.712129232458725-2 chr3 30995878 30997666 + 0.712129232458725 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 1001 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak1_127_86_0.265931609649336_6.5759093006734_0.712129232458725-2 chr15 99074212 99074967 + 0.712129232458725 NA promoter-TSS (NM_030159) promoter-TSS (NM_030159) 80 NR_155351 102637490 Mm.421289 NR_155351 ENSMUSG00000116371 Gm34284 - predicted gene, 34284 ncRNA common_peak1_127_86_0.265931609649336_6.5759093006734_0.712129232458725 chr12 113140602 113141823 + 0.712129232458725 NA intron (NM_001347443, intron 1 of 6) intron (NM_001347443, intron 1 of 6) 607 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding common_peak1_128_86_0.277079657014915_6.58148332435618_0.712129232458725 chr11 99558344 99559705 + 0.712129232458725 NA Intergenic Intergenic -2171 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding common_peak2_103_68_0.302903758530455_6.2599763360434_0.712045166899466 chr1 162243944 162244802 + 0.712045166899466 NA intron (NM_001038619, intron 13 of 20) (TCCCC)n|Simple_repeat|Simple_repeat 21005 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA common_peak1_82_85_-0.33794113381118_6.25729418779651_0.712045166899466 chr4 45341689 45342704 + 0.712045166899466 NA promoter-TSS (NM_153167) promoter-TSS (NM_153167) 95 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding common_peak2_82_85_-0.33794113381118_6.25729418779651_0.712045166899466 chr13 32926334 32927440 + 0.712045166899466 NA Intergenic Intergenic -28747 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_103_68_0.302903758530455_6.2599763360434_0.712045166899466 chr10 62601626 62602753 + 0.712045166899466 NA exon (NM_019553, exon 1 of 15) exon (NM_019553, exon 1 of 15) 109 NM_019553 56200 Mm.413275 NM_019553 ENSMUSG00000020075 Ddx21 AI255159|AL022742|D10Ertd645e|D10Wsu42e DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein-coding common_peak1_71_45_0.361094313042448_5.70410911257824_0.711514064421853-2 chr19 7217114 7217580 + 0.711514064421853 NA intron (NM_007750, intron 1 of 1) CpG 269 NM_007750 12868 Mm.14022 NM_007750 ENSMUSG00000035885 Cox8a COX8L cytochrome c oxidase subunit VIIIa protein-coding common_peak1_71_45_0.361094313042448_5.70410911257824_0.711514064421853 chr1 157519217 157520794 + 0.711514064421853 NA intron (NM_033354, intron 2 of 27) intron (NM_033354, intron 2 of 27) -6165 NM_001159986 89867 Mm.87114 NM_033354 ENSMUSG00000026589 Sec16b Lztr2|Rgpr|Rgpr-p117 SEC16 homolog B (S. cerevisiae) protein-coding common_peak1_71_45_0.361094313042448_5.70410911257824_0.711514064421853-3 chr6 119902395 119903030 + 0.711514064421853 NA promoter-TSS (NM_011236) promoter-TSS (NM_011236) 14 NM_001166383 19365 Mm.149 NM_011236 ENSMUSG00000030166 Rad52 Rad52yh RAD52 homolog, DNA repair protein protein-coding unique_peak2_54_59_-0.40805829425758_5.70286144847973_0.711514064421841 chr15 7813045 7813936 + 0.711514064421841 NA promoter-TSS (NM_001301333) promoter-TSS (NM_001301333) -237 NM_001301333 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_54_59_-0.40805829425758_5.70286144847973_0.711514064421841 chr11 116099023 116099768 + 0.711514064421841 NA Intergenic Intergenic 10840 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak2_54_59_-0.40805829425758_5.70286144847973_0.711514064421841 chr15 101254255 101254758 + 0.711514064421841 NA Intergenic Intergenic -12340 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|NUR77-1|NUR77-2|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak2_187_178_-0.22426443310869_7.37168356070991_0.71144194675457 chr2 113440539 113442673 + 0.71144194675457 NA exon (NM_001285459, exon 1 of 17) exon (NM_001285459, exon 1 of 17) 542 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_117_116_-0.27801861383397_6.73135541266642_0.711351681653809 chr11 77607215 77608302 + 0.711351681653809 NA promoter-TSS (NM_144825) promoter-TSS (NM_144825) 57 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak1_141_96_0.25765291994636_6.72873930216031_0.711351681653809-2 chr3 96239495 96240329 + 0.711351681653809 NA promoter-TSS (NM_178216) promoter-TSS (NM_178216) 422 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_141_96_0.25765291994636_6.72873930216031_0.711351681653809 chr10 13965906 13967694 + 0.711351681653809 NA intron (NM_001358782, intron 1 of 9) CpG-904 421 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_116_116_-0.290210320246627_6.72525955946009_0.711351681653809 chr6 17693491 17694685 + 0.711351681653809 NA promoter-TSS (NM_001289626) promoter-TSS (NM_001289626) 94 NM_001289625 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding common_peak2_116_116_-0.290210320246627_6.72525955946009_0.711351681653809 chr2 23038932 23040149 + 0.711351681653809 NA intron (NM_001077190, intron 1 of 10) CpG 701 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak2_115_77_0.282455822941773_6.42663013033314_0.710824722492017 chr5 106695847 106696865 + 0.710824722492017 NA intron (NM_026856, intron 1 of 6) CpG 474 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding common_peak1_115_77_0.282455822941773_6.42663013033314_0.710824722492017 chr6 98954271 98955888 + 0.710824722492017 NA intron (NM_001197321, intron 10 of 17) B1_Mus2|SINE|Alu 73219 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_93_95_-0.318356176992346_6.42578441222498_0.710824722492017 chr17 35134573 35135739 + 0.710824722492017 NA promoter-TSS (NM_001252468) promoter-TSS (NM_001252468) -22 NM_001252468 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding common_peak2_93_95_-0.318356176992346_6.42578441222498_0.710824722492017-2 chr7 67972640 67974153 + 0.710824722492017 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 21139 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_93_95_-0.318356176992346_6.42578441222498_0.710824722492017 chr12 91588534 91589866 + 0.710824722492017 NA intron (NM_175335, intron 1 of 8) intron (NM_175335, intron 1 of 8) 449 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak2_92_60_0.32054780421735_6.09101123967156_0.710725903974591-3 chr5 33628967 33629558 + 0.710725903974591 NA intron (NM_001359463, intron 1 of 6) CpG 373 NM_178390 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding common_peak2_92_60_0.32054780421735_6.09101123967156_0.710725903974591-2 chr2 158215472 158216353 + 0.710725903974591 NA exon (NM_177657, exon 4 of 14) exon (NM_177657, exon 4 of 14) 13312 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak1_92_60_0.32054780421735_6.09101123967156_0.710725903974591 chr5 125073279 125074049 + 0.710725903974591 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 70189 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_92_60_0.32054780421735_6.09101123967156_0.710725903974591 chr15 86058938 86059785 + 0.710725903974591 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 634 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_72_76_-0.362371105128974_6.08560098813041_0.710725903974579 chr10 19464644 19466020 + 0.710725903974579 NA Intergenic Intergenic -21383 NR_152784 102635880 Mm.331974 NR_152784 ENSMUSG00000110902 Gm33104 - predicted gene, 33104 ncRNA common_peak2_72_76_-0.362371105128974_6.08560098813041_0.710725903974579-2 chr5 135961095 135962246 + 0.710725903974579 NA intron (NM_001160366, intron 10 of 10) PB1D11|SINE|Alu 12806 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_272_194_0.186592553360599_7.70062659042991_0.710578585660835 chr19 55743347 55745234 + 0.710578585660835 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 2480 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_185_129_0.221862349178537_7.13329898761772_0.71028088012381 chr11 32642518 32644000 + 0.71028088012381 NA intron (NM_001271349, intron 1 of 11) intron (NM_001271349, intron 1 of 11) 704 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak2_185_129_0.221862349178537_7.13329898761772_0.71028088012381-2 chr11 59307015 59308757 + 0.71028088012381 NA intron (NM_139298, intron 1 of 3) intron (NM_139298, intron 1 of 3) 956 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding common_peak2_172_165_-0.234602391480069_7.25773823560689_0.710197845181783 chr2 168229818 168231120 + 0.710197845181783 NA promoter-TSS (NM_001310084) promoter-TSS (NM_001310084) -90 NM_001310084 13480 Mm.422657 NM_010072 ENSMUSG00000078919 Dpm1 AI118379|AI194292 dolichol-phosphate (beta-D) mannosyltransferase 1 protein-coding common_peak2_188_179_-0.22470217542863_7.37950200861536_0.708972348381363 chr10 93309546 93310886 + 0.708972348381363 NA intron (NM_001322265, intron 1 of 4) CpG 943 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_171_118_0.237314807755_7.01347516718544_0.708886595533899 chr4 133752524 133753959 + 0.708886595533899 NA exon (NM_001080819, exon 1 of 20) exon (NM_001080819, exon 1 of 20) 370 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_171_118_0.237314807755_7.01347516718544_0.708886595533899-2 chr9 64340234 64341525 + 0.708886595533899 NA promoter-TSS (NM_001177784) promoter-TSS (NM_001177784) -106 NM_001177784 213550 Mm.268341 NM_172519 ENSMUSG00000032396 Dis3l AV340375 DIS3 like exosome 3'-5' exoribonuclease protein-coding common_peak1_255_181_0.194025485726122_7.60480738306176_0.70829911682929 chr9 87729180 87731148 + 0.70829911682929 NA intron (NM_023814, intron 1 of 7) CpG 1096 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding common_peak2_105_106_-0.30275191070453_6.59009103104888_0.707855216197395-2 chr6 89345189 89346325 + 0.707855216197395 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 16856 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak2_105_106_-0.30275191070453_6.59009103104888_0.707855216197395 chr15 41788750 41789924 + 0.707855216197395 NA promoter-TSS (NM_130885) promoter-TSS (NM_130885) -178 NM_001130163 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_105_106_-0.30275191070453_6.59009103104888_0.707855216197395 chr16 38089412 38090463 + 0.707855216197395 NA promoter-TSS (NR_033221) promoter-TSS (NR_033221) -677 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak1_105_106_-0.30275191070453_6.59009103104888_0.707855216197395-2 chr19 6951727 6952948 + 0.707855216197395 NA TTS (NM_007522) TTS (NM_007522) 9775 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak2_173_166_-0.235010648442574_7.26619896825276_0.70753549507664 chr14 21830629 21832168 + 0.70753549507664 NA promoter-TSS (NM_011695) promoter-TSS (NM_011695) -163 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding common_peak1_142_97_0.252908709145925_6.74116419868817_0.707505619155811-2 chr11 8663510 8664830 + 0.707505619155811 NA intron (NM_001083587, intron 1 of 30) CpG 365 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_142_97_0.252908709145925_6.74116419868817_0.707505619155811 chr1 171328097 171329504 + 0.707505619155811 NA promoter-TSS (NM_011615) promoter-TSS (NM_011615) -8 NM_001357550 21945 Mm.270139 NM_011615 ENSMUSG00000013973 Dedd CASP8IP1|DEFT|Dedpro1|FLDED1|KE05 death effector domain-containing protein-coding common_peak1_45_27_0.435498379738651_5.02510411192693_0.707209835768597-2 chr13 49707085 49707739 + 0.707209835768597 NA intron (NM_172015, intron 14 of 33) intron (NM_172015, intron 14 of 33) 25282 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-8 chr9 108492395 108493103 + 0.707209835768597 NA intron (NM_001168373, intron 2 of 26) intron (NM_001168373, intron 2 of 26) 2073 NM_001168373 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597-5 chr5 142367557 142368155 + 0.707209835768597 NA Intergenic CpG -33641 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-5 chr2 27474879 27475351 + 0.707209835768597 NA intron (NM_001113573, intron 1 of 11) CpG 283 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597 chr16 62642636 62642998 + 0.707209835768597 NA Intergenic Intergenic 143899 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597-6 chr8 36961778 36962216 + 0.707209835768597 NA Intergenic Intergenic -9555 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-6 chr2 122738557 122738952 + 0.707209835768597 NA intron (NM_019788, intron 1 of 4) CpG 249 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding unique_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597 chr10 78716248 78717023 + 0.707209835768597 NA intron (NM_009809, intron 1 of 6) intron (NM_009809, intron 1 of 6) 1658 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-3 chr17 35634505 35634842 + 0.707209835768597 NA Intergenic Intergenic -8036 NM_001244654 672682 Mm.454025 NM_001244654 ENSMUSG00000090588 Gm9573 Muc21 predicted gene 9573 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-4 chr17 45795469 45796172 + 0.707209835768597 NA Intergenic B3|SINE|B2 61314 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_45_27_0.435498379738651_5.02510411192693_0.707209835768597 chr15 85858934 85859514 + 0.707209835768597 NA promoter-TSS (NM_001168672) promoter-TSS (NM_001168672) -483 NM_001168672 29870 Mm.20858 NM_013882 ENSMUSG00000022385 Gtse1 B99|Gtse-1 G two S phase expressed protein 1 protein-coding common_peak1_45_27_0.435498379738651_5.02510411192693_0.707209835768597 chr1 121327094 121327721 + 0.707209835768597 NA intron (NM_178082, intron 1 of 5) intron (NM_178082, intron 1 of 5) 271 NM_001271531 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding common_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597-4 chr5 25499222 25499530 + 0.707209835768597 NA promoter-TSS (NM_001081383) promoter-TSS (NM_001081383) -421 NR_030700 320965 Mm.32025 NR_030700 4831440E17Rik - RIKEN cDNA 4831440E17 gene ncRNA common_peak1_32_38_-0.51833623446449_5.02623410163_0.707209835768597 chr16 30069816 30070168 + 0.707209835768597 NA Intergenic Intergenic 4635 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597 chr14 67716220 67716597 + 0.707209835768597 NA promoter-TSS (NM_001110162) promoter-TSS (NM_001110162) 310 NM_001285933 105440 Mm.6720 NM_134073 ENSMUSG00000034327 Kctd9 - potassium channel tetramerisation domain containing 9 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-2 chr14 73524781 73525219 + 0.707209835768597 NA intron (NM_172527, intron 3 of 4) CpG 249 NM_001360484 214254 Mm.386852 NM_172527 ENSMUSG00000033405 Nudt15 6530403O17|A730068G11Rik|MTH2 nudix (nucleoside diphosphate linked moiety X)-type motif 15 protein-coding common_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597-3 chr3 58417934 58418631 + 0.707209835768597 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 3562 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_45_27_0.435498379738651_5.02510411192693_0.707209835768597-4 chr4 139310303 139311222 + 0.707209835768597 NA promoter-TSS (NM_025337) promoter-TSS (NM_025337) 18 NM_025337 110198 Mm.482154 NM_025337 ENSMUSG00000028743 Akr7a5 0610025K21Rik|Afar|Afar1|Akr7a2 aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) protein-coding unique_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597-2 chr16 3743241 3743926 + 0.707209835768597 NA promoter-TSS (NM_148924) promoter-TSS (NM_148924) -516 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak2_45_27_0.435498379738651_5.02510411192693_0.707209835768597-7 chr5 23783163 23783577 + 0.707209835768597 NA intron (NM_178403, intron 1 of 15) CpG 341 NM_001289780 78697 Mm.58660 NM_178403 ENSMUSG00000057541 Pus7 C330017I15Rik pseudouridylate synthase 7 protein-coding common_peak1_45_27_0.435498379738651_5.02510411192693_0.707209835768597-3 chr15 64005722 64006433 + 0.707209835768597 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) -8011 NM_001360035 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_32_38_-0.51833623446449_5.02623410163_0.707209835768597-2 chr2 167942034 167942683 + 0.707209835768597 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 10031 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_104_69_0.295853598255048_6.27720981607249_0.706720175003303 chr1 134075679 134077102 + 0.706720175003303 NA 3' UTR (NM_007570, exon 2 of 2) 3' UTR (NM_007570, exon 2 of 2) 2765 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_104_69_0.295853598255048_6.27720981607249_0.706720175003303-2 chr7 130654026 130655522 + 0.706720175003303 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -37782 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak2_275_196_0.187527125420844_7.7158153821668_0.706672300139681 chr8 70492339 70494176 + 0.706672300139681 NA 5' UTR (NM_018827, exon 1 of 9) 5' UTR (NM_018827, exon 1 of 9) 126 NM_018827 12931 Mm.335584 NM_018827 ENSMUSG00000007888 Crlf1 CLF-1|CRLM-3|CRLM3|NR6|NR6.1 cytokine receptor-like factor 1 protein-coding common_peak2_220_155_0.205816809565033_7.38831062364476_0.706532320744837 chr2 32880818 32882611 + 0.706532320744837 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 5580 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_222_209_-0.210120844681906_7.60918509532517_0.7062125689905 chr15 31600885 31602180 + 0.7062125689905 NA promoter-TSS (NM_026546) promoter-TSS (NM_026546) 7 NM_001348035 12465 Mm.282158 NM_007637 ENSMUSG00000022234 Cct5 CCT-epsilon|Ccte|TCP-1-epsilon|TCPE|mKIAA0098 chaperonin containing Tcp1, subunit 5 (epsilon) protein-coding common_peak2_94_96_-0.318147468461347_6.44083910795645_0.706097421680373 chr16 24886719 24887836 + 0.706097421680373 NA intron (NM_178665, intron 9 of 12) intron (NM_178665, intron 9 of 12) 165422 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_94_96_-0.318147468461347_6.44083910795645_0.706097421680373-4 chr8 122556540 122557553 + 0.706097421680373 NA Intergenic Intergenic -5717 NM_001357349 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_94_96_-0.318147468461347_6.44083910795645_0.706097421680373-3 chr7 79284429 79285429 + 0.706097421680373 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 11663 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_94_96_-0.318147468461347_6.44083910795645_0.706097421680373-2 chr3 37418641 37419538 + 0.706097421680373 NA promoter-TSS (NM_001163511) promoter-TSS (NM_001163511) 507 NM_001291044 229228 Mm.436967 NM_153561 ENSMUSG00000050174 Nudt6 Asfgf2b nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein-coding common_peak1_94_96_-0.318147468461347_6.44083910795645_0.706097421680373-2 chr8 69995299 69996179 + 0.706097421680373 NA intron (NM_001286450, intron 1 of 12) intron (NM_001286450, intron 1 of 12) 645 NM_001286450 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_117_78_0.288565357572332_6.44806342696327_0.706097421680373 chr3 61362797 61363771 + 0.706097421680373 NA Intergenic Intergenic -1223 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_117_78_0.288565357572332_6.44806342696327_0.706097421680373 chr7 27489367 27490524 + 0.706097421680373 NA exon (NM_018820, exon 2 of 2) exon (NM_018820, exon 2 of 2) 2992 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak1_94_96_-0.318147468461347_6.44083910795645_0.706097421680373 chr7 28381272 28382142 + 0.706097421680373 NA Intergenic Intergenic -2479 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak1_82_53_0.33343611872745_5.92160556152719_0.705856815581141 chr2 156311862 156312889 + 0.705856815581141 NA promoter-TSS (NM_001316755) promoter-TSS (NM_001316755) -98 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding unique_peak1_82_53_0.33343611872745_5.92160556152719_0.705856815581141 chr7 90306884 90308056 + 0.705856815581141 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 5115 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_64_68_-0.370384363142422_5.92333227520696_0.705856815581141 chr19 8953924 8954437 + 0.705856815581141 NA intron (NM_197993, intron 1 of 8) intron (NM_197993, intron 1 of 8) 348 NM_197993 70044 Mm.165979 NM_197993 ENSMUSG00000071645 Tut1 2700038E08Rik|PAPD2|Rbm21|TUTase6|U6-TUTase|star-PAP terminal uridylyl transferase 1, U6 snRNA-specific protein-coding common_peak2_64_68_-0.370384363142422_5.92333227520696_0.705856815581141 chr6 99027891 99028941 + 0.705856815581141 NA promoter-TSS (NM_001197322) promoter-TSS (NM_001197322) -118 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_63_68_-0.392594371706862_5.91222727092474_0.705856815581141 chr3 63976188 63976788 + 0.705856815581141 NA intron (NM_001033300, intron 1 of 15) CpG 345 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding common_peak1_63_68_-0.392594371706862_5.91222727092474_0.705856815581141 chr7 113151921 113152545 + 0.705856815581141 NA Intergenic Intergenic -10218 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-4 chr13 5346251 5347063 + 0.705686442909787 NA Intergenic Intergenic 511435 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-2 chr8 95434357 95434796 + 0.705686442909787 NA 5' UTR (NM_008187, exon 1 of 6) 5' UTR (NM_008187, exon 1 of 6) 293 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding common_peak1_62_39_0.371442203359472_5.5076491965671_0.705686442909787 chr2 25500818 25501283 + 0.705686442909787 NA promoter-TSS (NM_027062) promoter-TSS (NM_027062) 300 NM_013908 30839 Mm.29170 NM_013908 ENSMUSG00000015095 Fbxw5 AI159739|Fbw5 F-box and WD-40 domain protein 5 protein-coding common_peak1_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-2 chr10 92721832 92722337 + 0.705686442909787 NA intron (NM_008682, intron 1 of 14) CpG 334 NM_008682 17997 Mm.2998 NM_008682 ENSMUSG00000019988 Nedd1 - neural precursor cell expressed, developmentally down-regulated gene 1 protein-coding common_peak1_46_52_-0.454259151261144_5.50079087893263_0.705686442909787 chr1 136698888 136699455 + 0.705686442909787 NA intron (NR_037986, intron 1 of 4) intron (NR_037986, intron 1 of 4) 2960 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak2_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-3 chr9 77754582 77755272 + 0.705686442909787 NA exon (NM_010295, exon 1 of 16) exon (NM_010295, exon 1 of 16) 392 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak2_46_52_-0.454259151261144_5.50079087893263_0.705686442909787 chr2 60810023 60810678 + 0.705686442909787 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) 71088 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_62_39_0.371442203359472_5.5076491965671_0.705686442909787-2 chr8 79490710 79491368 + 0.705686442909787 NA Intergenic Intergenic -91571 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak1_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-5 chr15 53145758 53146324 + 0.705686442909787 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 200142 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_62_39_0.371442203359472_5.5076491965671_0.705686442909787 chr3 94954187 94955237 + 0.705686442909787 NA intron (NM_001355705, intron 1 of 9) intron (NM_001355705, intron 1 of 9) 196 NM_001355705 53970 Mm.24308 NM_017395 ENSMUSG00000005774 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) protein-coding common_peak1_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-3 chr11 116434241 116434967 + 0.705686442909787 NA non-coding (NR_003376, exon 3 of 4) non-coding (NR_003376, exon 3 of 4) 391 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak1_46_52_-0.454259151261144_5.50079087893263_0.705686442909787-6 chr9 121857785 121858372 + 0.705686442909787 NA promoter-TSS (NM_001357839) promoter-TSS (NM_001357839) -282 NM_001357840 56295 Mm.347915 NM_019814 ENSMUSG00000038412 Higd1a 2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1 HIG1 domain family, member 1A protein-coding common_peak2_62_39_0.371442203359472_5.5076491965671_0.705686442909787 chr12 112693054 112693544 + 0.705686442909787 NA Intergenic Intergenic 14459 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-3 chr13 93771879 93772544 + 0.705485015404196 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) 532 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-2 chr10 96627825 96628359 + 0.705485015404196 NA Intergenic RMER1C|Other|Other 11091 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196 chr1 74284294 74284647 + 0.705485015404196 NA promoter-TSS (NM_025580) promoter-TSS (NM_025580) 268 NM_001190444 227290 Mm.379371 NM_146110 ENSMUSG00000006299 Aamp AU040907|Aamp-rs angio-associated migratory protein protein-coding common_peak1_26_32_-0.564792288885051_4.76199797491593_0.705485015404196 chr11 98863766 98864300 + 0.705485015404196 NA intron (NM_197940, intron 1 of 7) CpG 435 NM_197940 68524 Mm.28661 NM_197940 ENSMUSG00000038013 Wipf2 1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire WAS/WASL interacting protein family, member 2 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-12 chr8 33901936 33902509 + 0.705485015404196 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 27641 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-8 chr3 51197612 51197929 + 0.705485015404196 NA Intergenic Intergenic -26677 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding unique_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196 chr10 20105026 20105559 + 0.705485015404196 NA intron (NM_008580, intron 18 of 29) intron (NM_008580, intron 18 of 29) -43628 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-4 chr2 155473500 155473741 + 0.705485015404196 NA Intergenic Intergenic -32837 NM_019825 56406 Mm.27592 NM_019825 ENSMUSG00000038369 Ncoa6 AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181 nuclear receptor coactivator 6 protein-coding unique_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-4 chr6 17481023 17481579 + 0.705485015404196 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 17344 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_38_22_0.482811820625556_4.76496786636979_0.705485015404196 chr4 59757048 59757505 + 0.705485015404196 NA Intergenic Intergenic 26579 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-4 chr15 77910189 77910546 + 0.705485015404196 NA Intergenic Intergenic 18627 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-13 chr9 40449334 40450149 + 0.705485015404196 NA intron (NM_001357617, intron 1 of 20) intron (NM_001357617, intron 1 of 20) 6023 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-6 chr2 152606116 152606665 + 0.705485015404196 NA intron (NM_001037247, intron 1 of 1) B4A|SINE|B4 2063 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding unique_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-2 chr5 93095515 93095947 + 0.705485015404196 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 2315 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-14 chr9 58298764 58299211 + 0.705485015404196 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 14225 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-2 chr17 62880563 62880921 + 0.705485015404196 NA intron (NM_010109, intron 1 of 3) CpG 575 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-5 chr8 47971949 47972475 + 0.705485015404196 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 18339 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-11 chr7 49474903 49475335 + 0.705485015404196 NA intron (NM_175272, intron 10 of 37) intron (NM_175272, intron 10 of 37) 161716 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-5 chr2 101967634 101968073 + 0.705485015404196 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 81591 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding unique_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-2 chr15 84681080 84681372 + 0.705485015404196 NA exon (NM_001346662, exon 2 of 9) exon (NM_001346662, exon 2 of 9) 228 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak2_38_22_0.482811820625556_4.76496786636979_0.705485015404196-3 chr8 12996101 12996498 + 0.705485015404196 NA intron (NM_001159486, intron 5 of 29) intron (NM_001159486, intron 5 of 29) -29735 NM_010172 14068 Mm.4827 NM_010172 ENSMUSG00000031443 F7 AI132620|Cf7|FVII coagulation factor VII protein-coding common_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-2 chr13 42347132 42347531 + 0.705485015404196 NA Intergenic Intergenic 45855 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196 chr4 134743826 134744441 + 0.705485015404196 NA Intergenic Intergenic 23871 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-3 chr12 104000994 104001508 + 0.705485015404196 NA exon (NM_001361910, exon 3 of 5) exon (NM_001361910, exon 3 of 5) -11294 NM_001166350 380780 Mm.201338 NM_199314 ENSMUSG00000063232 Serpina11 Gm895 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 protein-coding common_peak2_38_22_0.482811820625556_4.76496786636979_0.705485015404196-2 chr7 28419073 28419412 + 0.705485015404196 NA intron (NM_175021, intron 2 of 12) intron (NM_175021, intron 2 of 12) 16949 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196 chr12 35733637 35734124 + 0.705485015404196 NA Intergenic Intergenic -38762 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-7 chr2 167063278 167063776 + 0.705485015404196 NA promoter-TSS (NM_001033196) promoter-TSS (NM_001033196) -512 NM_001033196 98999 Mm.297074 NM_001033196 ENSMUSG00000039501 Znfx1 AI481105|Astx3 zinc finger, NFX1-type containing 1 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-9 chr4 107923124 107923490 + 0.705485015404196 NA intron (NM_009949, intron 1 of 4) intron (NM_009949, intron 1 of 4) 282 NM_009949 12896 Mm.307620 NM_009949 ENSMUSG00000028607 Cpt2 AI323697|CPTII carnitine palmitoyltransferase 2 protein-coding common_peak1_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-3 chr3 15216227 15216852 + 0.705485015404196 NA Intergenic Intergenic 115763 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-10 chr5 135669727 135670674 + 0.705485015404196 NA Intergenic Intergenic -18945 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-5 chr5 122778790 122779312 + 0.705485015404196 NA intron (NM_001199676, intron 1 of 16) CpG 359 NM_001199676 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding unique_peak1_38_22_0.482811820625556_4.76496786636979_0.705485015404196-3 chr3 7503517 7504059 + 0.705485015404196 NA intron (NM_173181, intron 1 of 8) intron (NM_173181, intron 1 of 8) 362 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding common_peak2_26_32_-0.564792288885051_4.76199797491593_0.705485015404196-6 chr6 91410762 91411291 + 0.705485015404196 NA intron (NM_009527, intron 1 of 3) CpG 343 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding common_peak2_73_77_-0.361496457378051_6.10465399017322_0.704761247860639 chr6 86683775 86684890 + 0.704761247860639 NA intron (NM_025665, intron 1 of 5) intron (NM_025665, intron 1 of 5) 159 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding common_peak1_143_98_0.248244669446607_6.75347895480291_0.70373109047012 chr3 84814648 84815996 + 0.70373109047012 NA promoter-TSS (NM_001177773) promoter-TSS (NM_001177773) -255 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_119_118_-0.278395177255303_6.75562017468029_0.70373109047012 chr9 65550758 65552190 + 0.70373109047012 NA Intergenic Intergenic 28613 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_55_60_-0.406093223344206_5.72769072589078_0.703723098351394-3 chr4 46650008 46650804 + 0.703723098351394 NA promoter-TSS (NM_198664) promoter-TSS (NM_198664) -207 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding common_peak2_55_60_-0.406093223344206_5.72769072589078_0.703723098351394 chr1 155972635 155973143 + 0.703723098351394 NA 5' UTR (NM_001039184, exon 1 of 38) 5' UTR (NM_001039184, exon 1 of 38) 366 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak1_72_46_0.349826583888289_5.72950214362178_0.703723098351394-2 chr14 76698035 76698854 + 0.703723098351394 NA Intergenic Intergenic 20876 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_55_60_-0.406093223344206_5.72769072589078_0.703723098351394-2 chr18 24529360 24529952 + 0.703723098351394 NA intron (NM_001360807, intron 1 of 7) CpG 548 NM_144861 225283 Mm.28427 NM_144861 ENSMUSG00000040446 Rprd1a C77387|mKIAA4077 regulation of nuclear pre-mRNA domain containing 1A protein-coding common_peak1_72_46_0.349826583888289_5.72950214362178_0.703723098351394-3 chr7 127008427 127009065 + 0.703723098351394 NA intron (NM_080638, intron 1 of 14) intron (NM_080638, intron 1 of 14) 5848 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak1_55_60_-0.406093223344206_5.72769072589078_0.703723098351394 chr16 37539888 37540371 + 0.703723098351394 NA promoter-TSS (NM_028812) promoter-TSS (NM_028812) 235 NM_001042499 67657 Mm.28158 NM_026297 ENSMUSG00000022827 Rabl3 4930553C05Rik|AA958834 RAB, member RAS oncogene family-like 3 protein-coding common_peak1_72_46_0.349826583888289_5.72950214362178_0.703723098351394 chr11 76398226 76399026 + 0.703723098351394 NA intron (NM_008750, intron 1 of 7) CpG 515 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak2_55_60_-0.406093223344206_5.72769072589078_0.703723098351394-2 chr2 30773287 30774120 + 0.703723098351394 NA Intergenic Intergenic 28034 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding common_peak1_72_46_0.349826583888289_5.72950214362178_0.703723098351394-4 chr8 22686468 22687281 + 0.703723098351394 NA intron (NM_001159774, intron 5 of 21) intron (NM_001159774, intron 5 of 21) 19709 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak2_72_46_0.349826583888289_5.72950214362178_0.703723098351394 chr18 80933530 80934079 + 0.703723098351394 NA intron (NM_015805, intron 1 of 28) CpG 254 NM_001201569 50771 Mm.247138 NM_015805 ENSMUSG00000024566 Atp9b AA934181|Atpc2b|IIb|MMR ATPase, class II, type 9B protein-coding common_peak2_55_60_-0.406093223344206_5.72769072589078_0.703723098351394-4 chr4 133574438 133575169 + 0.703723098351394 NA promoter-TSS (NM_172876) promoter-TSS (NM_172876) 58 NM_172876 242691 Mm.40110 NM_172876 ENSMUSG00000028850 Gpatch3 D930035B09Rik|Gpatc3 G patch domain containing 3 protein-coding common_peak1_130_88_0.266328877475993_6.60889786970439_0.70366929598153 chr6 117906838 117907644 + 0.70366929598153 NA promoter-TSS (NM_001166428) intron (NM_133834, intron 1 of 3) 459 NM_133834 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_107_107_-0.289395630836554_6.61018968674519_0.70366929598153-2 chr10 80161944 80163543 + 0.70366929598153 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -5096 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_130_88_0.266328877475993_6.60889786970439_0.70366929598153 chr6 117906874 117907713 + 0.70366929598153 NA promoter-TSS (NM_001166428) intron (NM_133834, intron 1 of 3) 511 NM_133834 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_107_107_-0.289395630836554_6.61018968674519_0.70366929598153 chr10 7158216 7159704 + 0.70366929598153 NA intron (NM_172546, intron 2 of 12) intron (NM_172546, intron 2 of 12) 53277 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_54_33_0.4113694601006_5.29314757130064_0.703513783457792-2 chr17 12318345 12319064 + 0.703513783457792 NA promoter-TSS (NR_045290) promoter-TSS (NR_045290) -44 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding common_peak1_39_45_-0.480919992658583_5.28310195972772_0.703513783457792-2 chr8 115333525 115333977 + 0.703513783457792 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 373143 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_39_45_-0.480919992658583_5.28310195972772_0.703513783457792-2 chr15 85042893 85043356 + 0.703513783457792 NA intron (NM_001356616, intron 1 of 8) intron (NM_001356616, intron 1 of 8) 382 NM_001356616 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak1_54_33_0.4113694601006_5.29314757130064_0.703513783457792-4 chr4 134660047 134660555 + 0.703513783457792 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 43989 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_39_45_-0.480919992658583_5.28310195972772_0.703513783457792-3 chr9 21238508 21239225 + 0.703513783457792 NA 5' UTR (NM_016679, exon 1 of 5) 5' UTR (NM_016679, exon 1 of 5) 466 NM_016679 50868 Mm.248266 NM_016679 ENSMUSG00000003308 Keap1 INRF2|mKIAA0132 kelch-like ECH-associated protein 1 protein-coding unique_peak2_39_45_-0.480919992658583_5.28310195972772_0.703513783457792 chr1 77695455 77696395 + 0.703513783457792 NA Intergenic Intergenic -180837 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding common_peak2_54_33_0.4113694601006_5.29314757130064_0.703513783457792-3 chr7 143978137 143978802 + 0.703513783457792 NA Intergenic CpG -30785 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_54_33_0.4113694601006_5.29314757130064_0.703513783457792 chr2 34406930 34407409 + 0.703513783457792 NA 5' UTR (NM_177345, exon 1 of 12) 5' UTR (NM_177345, exon 1 of 12) 318 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak2_54_33_0.4113694601006_5.29314757130064_0.703513783457792 chr11 60934947 60935267 + 0.703513783457792 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 3050 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_54_33_0.4113694601006_5.29314757130064_0.703513783457792-2 chr3 88684880 88685608 + 0.703513783457792 NA promoter-TSS (NM_028814) promoter-TSS (NM_028814) -543 NM_028814 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Khdc4|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak2_39_45_-0.480919992658583_5.28310195972772_0.703513783457792 chr11 94933172 94933977 + 0.703513783457792 NA Intergenic Intergenic -2650 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak1_39_45_-0.480919992658583_5.28310195972772_0.703513783457792 chr12 9839519 9839994 + 0.703513783457792 NA Intergenic Intergenic 265314 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding common_peak1_54_33_0.4113694601006_5.29314757130064_0.703513783457792-5 chr6 99439314 99439969 + 0.703513783457792 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -4296 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_54_33_0.4113694601006_5.29314757130064_0.703513783457792-4 chr8 61339868 61340322 + 0.703513783457792 NA intron (NM_021506, intron 4 of 11) intron (NM_021506, intron 4 of 11) -51223 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_54_33_0.4113694601006_5.29314757130064_0.703513783457792-3 chr3 107792955 107793485 + 0.703513783457792 NA Intergenic Intergenic -32751 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_280_258_-0.181510216484073_7.92605317944452_0.703410281501258 chr8 20296598 20297449 + 0.703410281501258 NA intron (NR_030708, intron 1 of 4) CpG 409 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak1_158_109_0.238190964399411_6.90045519572437_0.702224708167254 chr18 75363501 75364792 + 0.702224708167254 NA intron (NR_155535, intron 5 of 6) intron (NR_155535, intron 5 of 6) 2942 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak2_132_130_-0.269655476991417_6.89859526304174_0.702224708167254 chr15 98566838 98567741 + 0.702224708167254 NA promoter-TSS (NR_028442) promoter-TSS (NR_028442) -35 NR_028442 100048895 Mm.471074 NR_028442 9330020H09Rik - RIKEN cDNA 9330020H09 gene ncRNA common_peak1_223_157_0.206753406895089_7.40715745162465_0.701738876442028 chr14 57744965 57746901 + 0.701738876442028 NA 5' UTR (NM_015771, exon 1 of 8) 5' UTR (NM_015771, exon 1 of 8) 190 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_105_70_0.288967956191934_6.29423109760065_0.701531665477134 chr2 18672492 18673329 + 0.701531665477134 NA intron (NM_147778, intron 1 of 7) intron (NM_147778, intron 1 of 7) 448 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak1_84_87_-0.336998842120211_6.29093219757719_0.701531665477134 chr5 98030437 98031455 + 0.701531665477134 NA promoter-TSS (NM_133738) promoter-TSS (NM_133738) 16 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding common_peak1_105_70_0.288967956191934_6.29423109760065_0.701531665477134-2 chr9 65346129 65347222 + 0.701531665477134 NA exon (NM_016688, exon 1 of 5) exon (NM_016688, exon 1 of 5) 607 NM_016688 50996 Mm.29193 NM_016688 ENSMUSG00000041837 Pdcd7 C80112|ES18 programmed cell death 7 protein-coding common_peak2_85_87_-0.320244068001108_6.29930958463674_0.701531665477134 chr10 81349294 81350318 + 0.701531665477134 NA intron (NM_001163165, intron 2 of 9) intron (NM_001163165, intron 2 of 9) 620 NM_001163165 15353 Mm.38474 NM_010440 ENSMUSG00000020232 Hmg20b AW610687|BRAF35|Hmgx2|Hmgxb2|Smarce1r high mobility group 20B protein-coding common_peak2_105_70_0.288967956191934_6.29423109760065_0.701531665477134 chr17 24550084 24550911 + 0.701531665477134 NA intron (NM_013630, intron 1 of 45) CpG 547 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystin 1, transient receptor poteintial channel interacting protein-coding common_peak1_96_97_-0.30309928970413_6.46316019926314_0.701478133004951 chr8 61309486 61310624 + 0.701478133004951 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -21183 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_118_79_0.282506832449975_6.46318151111235_0.701478133004951 chr10 80432801 80434058 + 0.701478133004951 NA 5' UTR (NM_001164151, exon 1 of 19) 5' UTR (NM_001164151, exon 1 of 19) 224 NM_001164150 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding common_peak2_461_412_-0.142437876167291_8.6187790333358_0.700117629209822 chr4 45488557 45492283 + 0.700117629209822 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 40408 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_145_99_0.253504266217958_6.7706083228837_0.700026115476639 chr13 119790073 119791604 + 0.700026115476639 NA promoter-TSS (NM_028245) promoter-TSS (NM_028245) -32 NM_001302549 72465 Mm.139115 NM_028245 ENSMUSG00000094870 Zfp131 2610109I01Rik|AW558871|Znf131 zinc finger protein 131 protein-coding common_peak1_207_145_0.214548676855363_7.2970988973077_0.699752542946777 chr8 105860589 105861974 + 0.699752542946777 NA intron (NM_001357230, intron 1 of 4) intron (NM_001357230, intron 1 of 4) 406 NM_001357230 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-7 chr2 152815971 152816199 + 0.699649909729472 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 12404 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-20 chr2 59599227 59599455 + 0.699649909729472 NA Intergenic Intergenic -12701 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-2 chr11 67923376 67923710 + 0.699649909729472 NA Intergenic Intergenic -1390 NM_173754 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-3 chr10 116220826 116221099 + 0.699649909729472 NA intron (NM_001358484, intron 5 of 12) intron (NM_001358484, intron 5 of 12) 43611 NM_001161840 19279 Mm.336316 NM_011217 ENSMUSG00000020151 Ptprr Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213 protein tyrosine phosphatase, receptor type, R protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-28 chr8 119453563 119453940 + 0.699649909729472 NA intron (NM_054095, intron 3 of 12) intron (NM_054095, intron 3 of 12) 7032 NM_054095 117148 Mm.356184 NM_054095 ENSMUSG00000031837 Necab2 Efcbp2 N-terminal EF-hand calcium binding protein 2 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-16 chr5 72478317 72478630 + 0.699649909729472 NA intron (NM_001122756, intron 1 of 21) intron (NM_001122756, intron 1 of 21) 25735 NM_016869 53419 Mm.332425 NM_016869 ENSMUSG00000005220 Corin AV273130|Lrp4 corin protein-coding unique_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472 chr12 73309019 73309292 + 0.699649909729472 NA intron (NM_001037717, intron 3 of 15) intron (NM_001037717, intron 3 of 15) 22307 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-15 chr19 55462868 55463360 + 0.699649909729472 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 147057 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-8 chr3 52103897 52104129 + 0.699649909729472 NA exon (NM_001004176, exon 1 of 5) exon (NM_001004176, exon 1 of 5) 993 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-2 chr11 54882978 54883199 + 0.699649909729472 NA Intergenic Intergenic 16705 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-7 chr15 27380308 27380557 + 0.699649909729472 NA Intergenic Intergenic -86245 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-13 chr3 27691246 27691685 + 0.699649909729472 NA intron (NM_001356953, intron 1 of 26) L2b|LINE|L2 18987 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-2 chr10 77541929 77542305 + 0.699649909729472 NA intron (NM_008404, intron 2 of 15) intron (NM_008404, intron 2 of 15) 11769 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-8 chr12 52637360 52637706 + 0.699649909729472 NA Intergenic Intergenic -35211 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-31 chr9 61965189 61965640 + 0.699649909729472 NA intron (NM_028748, intron 5 of 7) intron (NM_028748, intron 5 of 7) -18615 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-20 chr2 72299795 72300178 + 0.699649909729472 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 14285 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-25 chr6 114948406 114948709 + 0.699649909729472 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 20646 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-10 chr13 52891055 52891504 + 0.699649909729472 NA intron (NM_016709, intron 4 of 9) intron (NM_016709, intron 4 of 9) 38398 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-23 chr4 8689840 8690128 + 0.699649909729472 NA promoter-TSS (NM_001277149) promoter-TSS (NM_001277149) -422 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472 chr10 53596238 53596560 + 0.699649909729472 NA promoter-TSS (NM_025541) promoter-TSS (NM_025541) -562 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-18 chr2 60478561 60478775 + 0.699649909729472 NA intron (NM_008867, intron 11 of 29) intron (NM_008867, intron 11 of 29) 67143 NR_046065 100039176 Mm.261790 NR_046065 ENSMUSG00000087283 Gm13580 - predicted gene 13580 ncRNA unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-10 chr13 99761698 99762152 + 0.699649909729472 NA Intergenic Intergenic 138758 NM_013732 27220 Mm.75498 NM_013732 ENSMUSG00000021647 Cartpt Cart CART prepropeptide protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-6 chr2 120153480 120153779 + 0.699649909729472 NA intron (NM_133838, intron 1 of 5) intron (NM_133838, intron 1 of 5) 946 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-10 chr17 47593958 47594182 + 0.699649909729472 NA intron (NM_001081635, intron 3 of 6) intron (NM_001081635, intron 3 of 6) 603 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-30 chr9 60310484 60310738 + 0.699649909729472 NA intron (NM_001040426, intron 6 of 17) intron (NM_001040426, intron 6 of 17) -169391 NM_172444 207596 Mm.28791 NM_172444 ENSMUSG00000032289 Thsd4 ADAMTSL-6|ADAMTSL6|AI585901|Adamtsl4|B230114P05Rik thrombospondin, type I, domain containing 4 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-31 chr9 75522576 75522901 + 0.699649909729472 NA intron (NM_001357828, intron 3 of 10) intron (NM_001357828, intron 3 of 10) 36919 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_20_10_0.660158056955327_3.78951064711496_0.699649909729472-2 chr4 105937959 105938229 + 0.699649909729472 NA Intergenic Intergenic -303119 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-31 chr9 44735369 44735683 + 0.699649909729472 NA promoter-TSS (NM_153537) promoter-TSS (NM_153537) -328 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-4 chr11 98367386 98367676 + 0.699649909729472 NA intron (NM_021547, intron 1 of 14) intron (NM_021547, intron 1 of 14) 9163 NM_021547 59045 Mm.265546 NM_021547 ENSMUSG00000018167 Stard3 Mln64|es64 START domain containing 3 protein-coding common_peak1_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-2 chr4 8690623 8690827 + 0.699649909729472 NA 5' UTR (NM_001277149, exon 1 of 38) 5' UTR (NM_001277149, exon 1 of 38) 319 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-26 chr5 147071399 147071739 + 0.699649909729472 NA intron (NM_080795, intron 1 of 9) intron (NM_080795, intron 1 of 9) 5003 NM_080795 140887 Mm.272203 NM_080795 ENSMUSG00000016520 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 protein-coding unique_peak2_20_10_0.660158056955327_3.78951064711496_0.699649909729472-2 chr4 142180704 142180960 + 0.699649909729472 NA intron (NM_001109684, intron 1 of 6) intron (NM_001109684, intron 1 of 6) 29376 NM_144531 71529 Mm.255986 NM_144531 ENSMUSG00000040606 Kazn 2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin kazrin, periplakin interacting protein protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-16 chr19 28645420 28645687 + 0.699649909729472 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -32671 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-7 chr15 79361177 79361409 + 0.699649909729472 NA 3' UTR (NM_001253817, exon 9 of 9) 3' UTR (NM_001253817, exon 9 of 9) 12891 NM_001304832 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-13 chr8 9205470 9205714 + 0.699649909729472 NA TTS (NM_173446) TTS (NM_173446) 60923 NR_073360 74688 Mm.159298 NR_073360 ENSMUSG00000109215 4930453L07Rik - RIKEN cDNA 4930453L07 gene ncRNA unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-28 chr8 64947955 64948213 + 0.699649909729472 NA intron (NM_001163747, intron 1 of 4) intron (NM_001163747, intron 1 of 4) 899 NM_028427 73067 Mm.294445 NM_028427 ENSMUSG00000025521 Tmem192 3110005G23Rik transmembrane protein 192 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-6 chr12 3370879 3371149 + 0.699649909729472 NA intron (NM_008445, intron 1 of 7) intron (NM_008445, intron 1 of 7) 5882 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-6 chr11 83789105 83789317 + 0.699649909729472 NA Intergenic Intergenic 35574 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472 chr10 24577330 24577712 + 0.699649909729472 NA Intergenic Intergenic -17921 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-8 chr18 75453950 75454232 + 0.699649909729472 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -60554 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-15 chr4 116464494 116464710 + 0.699649909729472 NA promoter-TSS (NM_008641) promoter-TSS (NM_008641) -421 NM_008641 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-11 chr16 92789714 92789992 + 0.699649909729472 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 36221 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-11 chr5 137510927 137511179 + 0.699649909729472 NA Intergenic CpG -7827 NM_031408 57330 Mm.268344 NM_031408 ENSMUSG00000029714 Gigyf1 Perq1|mKIAA4110 GRB10 interacting GYF protein 1 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-13 chr17 49456611 49456844 + 0.699649909729472 NA 3' UTR (NM_001008231, exon 26 of 26) 3' UTR (NM_001008231, exon 26 of 26) 28363 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-32 chr9 85616082 85616396 + 0.699649909729472 NA Intergenic Intergenic 133095 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-25 chr5 111202971 111203320 + 0.699649909729472 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -127552 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-3 chr10 120633107 120633518 + 0.699649909729472 NA Intergenic Intergenic -132420 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472 chr1 59237489 59237885 + 0.699649909729472 NA promoter-TSS (NM_028717) promoter-TSS (NM_028717) -456 NM_028717 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 alsin Rho guanine nucleotide exchange factor protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-32 chr9 55123237 55123578 + 0.699649909729472 NA Intergenic Intergenic -25962 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472 chr1 133835147 133835489 + 0.699649909729472 NA Intergenic Intergenic 71855 NM_054076 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-9 chr13 73682904 73683205 + 0.699649909729472 NA intron (NM_001359603, intron 9 of 10) intron (NM_001359603, intron 9 of 10) -5031 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-17 chr2 6380343 6380615 + 0.699649909729472 NA intron (NM_181399, intron 1 of 13) intron (NM_181399, intron 1 of 13) 27743 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-29 chr8 86685597 86685899 + 0.699649909729472 NA intron (NM_001168591, intron 5 of 8) intron (NM_001168591, intron 5 of 8) 34179 NM_001168591 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-11 chr3 55115070 55115334 + 0.699649909729472 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 3036 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-34 chrX 73882050 73882341 + 0.699649909729472 NA Intergenic Intergenic -1361 NM_008478 16728 Mm.260568 NM_008478 ENSMUSG00000031391 L1cam CD171|L1|N-CAM-L1|NCAM-L1 L1 cell adhesion molecule protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-6 chr11 105901891 105902268 + 0.699649909729472 NA exon (NM_181071, exon 18 of 26) exon (NM_181071, exon 18 of 26) 42408 NM_007805 13056 Mm.149403 NM_007805 ENSMUSG00000019590 Cyb561 - cytochrome b-561 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-5 chr14 46990015 46990349 + 0.699649909729472 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -11158 NM_001163433 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-16 chr16 85171316 85171810 + 0.699649909729472 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 2144 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-23 chr4 24966831 24967095 + 0.699649909729472 NA Intergenic Intergenic -6456 NM_030733 81006 Mm.160412 NM_030733 ENSMUSG00000040372 Gpr63 PSP24beta|Psp24-2 G protein-coupled receptor 63 protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-6 chr2 91948056 91948296 + 0.699649909729472 NA intron (NM_001166597, intron 1 of 31) intron (NM_001166597, intron 1 of 31) 2172 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-8 chr15 76078380 76078620 + 0.699649909729472 NA intron (NM_028364, intron 1 of 11) intron (NM_028364, intron 1 of 11) 2370 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-13 chr18 24111055 24111472 + 0.699649909729472 NA intron (NM_172625, intron 4 of 4) intron (NM_172625, intron 4 of 4) 10556 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-5 chr11 80533548 80533875 + 0.699649909729472 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -24605 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-18 chr6 83101802 83102014 + 0.699649909729472 NA exon (NM_001081266, exon 1 of 9) exon (NM_001081266, exon 1 of 9) 392 NM_001081266 243510 Mm.436553 NM_001081266 ENSMUSG00000107499 Ccdc142 A230058J24Rik coiled-coil domain containing 142 protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-5 chr19 40468185 40468426 + 0.699649909729472 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -16907 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-16 chr2 18676116 18676445 + 0.699649909729472 NA promoter-TSS (NM_007552) promoter-TSS (NM_007552) -738 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-11 chr15 62283089 62283329 + 0.699649909729472 NA Intergenic Intergenic -63758 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-19 chr2 145168260 145168486 + 0.699649909729472 NA intron (NM_001356497, intron 1 of 16) intron (NM_001356497, intron 1 of 16) 598 NM_001356497 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-3 chr11 58023960 58024250 + 0.699649909729472 NA intron (NM_028451, intron 1 of 18) ID_B1|SINE|B4 15041 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-29 chr7 28812265 28812613 + 0.699649909729472 NA intron (NM_177301, intron 1 of 12) intron (NM_177301, intron 1 of 12) 1549 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-9 chr16 4623961 4624349 + 0.699649909729472 NA intron (NM_025571, intron 1 of 4) intron (NM_025571, intron 1 of 4) 791 NM_025571 66449 Mm.354760 NM_025571 ENSMUSG00000014301 Pam16 2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-23 chr3 27270458 27270764 + 0.699649909729472 NA Intergenic Intergenic -46466 NM_009425 22035 Mm.1062 NM_009425 ENSMUSG00000039304 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Tnlg6a|Trail tumor necrosis factor (ligand) superfamily, member 10 protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-7 chr3 88627375 88627754 + 0.699649909729472 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 6170 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-30 chr9 21834975 21835356 + 0.699649909729472 NA promoter-TSS (NM_001080940) promoter-TSS (NM_001080940) -345 NM_001080940 624219 Mm.440264 NM_001080940 ENSMUSG00000047822 Angptl8 EG624219|Gm6484|Rifl angiopoietin-like 8 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-18 chr17 78450785 78451129 + 0.699649909729472 NA Intergenic Intergenic -32805 NM_001285940 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-9 chr4 108914846 108915119 + 0.699649909729472 NA intron (NM_023537, intron 2 of 4) intron (NM_023537, intron 2 of 4) 35912 NM_023537 69908 Mm.41580 NM_023537 ENSMUSG00000003411 Rab3b 2610528C18Rik RAB3B, member RAS oncogene family protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-5 chr11 104364522 104364782 + 0.699649909729472 NA intron (NM_001359634, intron 5 of 14) intron (NM_001359634, intron 5 of 14) 77639 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-25 chr5 64875395 64875944 + 0.699649909729472 NA Intergenic Intergenic 57030 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472 chr10 86302909 86303136 + 0.699649909729472 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 2610 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-33 chrX 7741257 7741501 + 0.699649909729472 NA promoter-TSS (NM_207202) promoter-TSS (NM_207202) -55 NM_207202 54648 Mm.63342 NM_207202 ENSMUSG00000031150 Ccdc120 AA030924|DXImx50e|Jm11|Sfc25 coiled-coil domain containing 120 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-24 chr5 36457353 36457711 + 0.699649909729472 NA TTS (NR_126490) TTS (NR_126490) 7322 NR_126490 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-27 chr7 16844873 16845257 + 0.699649909729472 NA intron (NM_178900, intron 1 of 17) intron (NM_178900, intron 1 of 17) 2000 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-26 chr6 67012820 67013288 + 0.699649909729472 NA intron (NM_001177560, intron 3 of 4) PB1|SINE|Alu -23545 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-15 chr19 5663261 5663666 + 0.699649909729472 NA intron (NM_001164481, intron 1 of 17) intron (NM_001164481, intron 1 of 17) 244 NM_001164482 20469 Mm.3072 NM_011379 ENSMUSG00000056917 Sipa1 Spa1 signal-induced proliferation associated gene 1 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-4 chr10 86159893 86160240 + 0.699649909729472 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 64212 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-14 chr14 121709157 121709522 + 0.699649909729472 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -10922 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_11_17_-0.851994375423817_3.7439278137304_0.699649909729472 chr10 19598530 19598748 + 0.699649909729472 NA intron (NM_010511, intron 2 of 6) intron (NM_010511, intron 2 of 6) 6690 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-6 chr14 98626829 98627221 + 0.699649909729472 NA Intergenic Intergenic 419111 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-3 chr17 25013610 25013813 + 0.699649909729472 NA exon (NM_020608, exon 2 of 21) exon (NM_020608, exon 2 of 21) 1519 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-14 chr18 24745889 24746219 + 0.699649909729472 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 37431 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472 chr1 64738121 64738410 + 0.699649909729472 NA promoter-TSS (NM_022721) promoter-TSS (NM_022721) -515 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-10 chr16 44558557 44558757 + 0.699649909729472 NA promoter-TSS (NR_037242) promoter-TSS (NR_037242) 213 NM_172506 117606 Mm.41561 NM_172506 ENSMUSG00000022687 Boc 4732455C11|mFLJ00376 biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472 chr1 159843031 159843279 + 0.699649909729472 NA intron (NM_022312, intron 2 of 22) intron (NM_022312, intron 2 of 22) -201225 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-7 chr12 55399502 55399802 + 0.699649909729472 NA intron (NM_011968, intron 1 of 6) intron (NM_011968, intron 1 of 6) 827 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-3 chr12 111539452 111539922 + 0.699649909729472 NA exon (NM_173363, exon 3 of 12) exon (NM_173363, exon 3 of 12) -1259 NR_033168 100316932 Mm.484709 NR_033168 ENSMUSG00000064493 Snora28 MBI-13 small nucleolar RNA, H/ACA box 28 snoRNA unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-21 chr2 152734495 152734858 + 0.699649909729472 NA Intergenic Intergenic -1575 NM_010495 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-10 chr4 155813342 155813713 + 0.699649909729472 NA exon (NM_207678, exon 3 of 11) exon (NM_207678, exon 3 of 11) 1038 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak1_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-4 chr7 92463520 92463786 + 0.699649909729472 NA Intergenic Intergenic -97496 NM_025515 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-21 chr2 84858229 84858546 + 0.699649909729472 NA intron (NM_001081349, intron 11 of 14) intron (NM_001081349, intron 11 of 14) 17761 NM_001083809 72401 Mm.22716 NM_024497 ENSMUSG00000027075 Slc43a1 2610016F07Rik|AA986141|Lat3|PB39|Pov1|R00504 solute carrier family 43, member 1 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-19 chr19 34706692 34706995 + 0.699649909729472 NA intron (NM_172838, intron 1 of 6) intron (NM_172838, intron 1 of 6) 40268 NM_172838 240638 Mm.74636 NM_172838 ENSMUSG00000009378 Slc16a12 3230401A21|AW210596 solute carrier family 16 (monocarboxylic acid transporters), member 12 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-9 chr2 137726432 137726775 + 0.699649909729472 NA Intergenic Intergenic -529981 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-24 chr4 139091617 139091957 + 0.699649909729472 NA intron (NM_008675, intron 1 of 3) intron (NM_008675, intron 1 of 3) 1183 NM_008675 17965 Mm.9404 NM_008675 ENSMUSG00000041120 Nbl1 D4H1S1733E|DAN|Dana|NO3 neuroblastoma, suppression of tumorigenicity 1 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-17 chr6 49096914 49097169 + 0.699649909729472 NA intron (NM_023670, intron 10 of 14) intron (NM_023670, intron 10 of 14) 23246 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-6 chr16 49854750 49855029 + 0.699649909729472 NA promoter-TSS (NM_010581) promoter-TSS (NM_010581) -765 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-2 chr10 80142428 80142630 + 0.699649909729472 NA exon (NM_025313, exon 1 of 4) exon (NM_025313, exon 1 of 4) 214 NM_025313 66043 Mm.278560 NM_025313 ENSMUSG00000003072 Atp5d 0610008F14Rik|1500000I11Rik|AA960090|AI876556|AU020773|Atp5f1d|C85518 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-19 chr2 61246822 61247146 + 0.699649909729472 NA Intergenic Intergenic -271833 NR_045335 100038493 Mm.388076 NR_045335 ENSMUSG00000075325 Gm13582 - predicted gene 13582 ncRNA common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-3 chr12 99562269 99562600 + 0.699649909729472 NA Intergenic Intergenic -1407 NR_136760 102639404 Mm.396324 NR_136760 ENSMUSG00000097917 Gm26839 - predicted gene, 26839 ncRNA unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-14 chr18 76161072 76161325 + 0.699649909729472 NA Intergenic CpG -9354 NR_105776 102465184 NR_105776 ENSMUSG00000098276 Mir6358 Gm27830|mmu-mir-6358 microRNA 6358 ncRNA common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-12 chr5 113629201 113629448 + 0.699649909729472 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 14279 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-27 chr8 110944523 110944801 + 0.699649909729472 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 24797 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-2 chr15 98932645 98932868 + 0.699649909729472 NA exon (NM_011654, exon 3 of 4) exon (NM_011654, exon 3 of 4) 1634 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-14 chr3 75555582 75556075 + 0.699649909729472 NA intron (NM_019745, intron 1 of 7) intron (NM_019745, intron 1 of 7) 1024 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-24 chr4 108887826 108888090 + 0.699649909729472 NA intron (NM_023537, intron 1 of 4) intron (NM_023537, intron 1 of 4) 8888 NM_023537 69908 Mm.41580 NM_023537 ENSMUSG00000003411 Rab3b 2610528C18Rik RAB3B, member RAS oncogene family protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-3 chr10 81930270 81930497 + 0.699649909729472 NA promoter-TSS (NM_199062).2 promoter-TSS (NM_199062).2 97 NM_199062 331188 Mm.351497 NM_199062 ENSMUSG00000096718 Zfp781 A130081B01 zinc finger protein 781 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-9 chr12 118816352 118816740 + 0.699649909729472 NA Intergenic Intergenic -29783 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-7 chr12 51848309 51848545 + 0.699649909729472 NA Intergenic Intergenic -18891 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-11 chr13 59771142 59771678 + 0.699649909729472 NA TTS (NM_153538) TTS (NM_153538) 1444 NR_015349 13996 Mm.490435 NR_015349 Etohd2 AW491659 ethanol decreased 2 ncRNA unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-22 chr2 172307160 172307389 + 0.699649909729472 NA Intergenic Intergenic -38303 NM_025912 67017 Mm.30013 NM_025912 ENSMUSG00000027495 Fam210b 2010011I20Rik|AI430961|AV108736 family with sequence similarity 210, member B protein-coding unique_peak1_11_17_-0.851994375423817_3.7439278137304_0.699649909729472 chr11 96861677 96861929 + 0.699649909729472 NA TTS (NM_019877) TTS (NM_019877) 11410 NR_029562 387170 NR_029562 ENSMUSG00000065515 Mir152 Mirn152|mir-152|mmu-mir-152 microRNA 152 ncRNA common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-9 chr7 116207318 116207564 + 0.699649909729472 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -8880 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-21 chr2 166235547 166236054 + 0.699649909729472 NA Intergenic Intergenic -38108 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 - predicted gene 11468 ncRNA unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-22 chr2 110179807 110180205 + 0.699649909729472 NA Intergenic Intergenic 125719 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-15 chr15 6253595 6253895 + 0.699649909729472 NA Intergenic Intergenic -46044 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-4 chr13 70867294 70867589 + 0.699649909729472 NA Intergenic Intergenic -15507 NM_029873 77166 Mm.159859 NM_029873 ENSMUSG00000021600 8030423J24Rik - RIKEN cDNA 8030423J24 gene protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-5 chr2 60713219 60713495 + 0.699649909729472 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 9246 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_20_10_0.660158056955327_3.78951064711496_0.699649909729472-3 chr5 34536212 34536529 + 0.699649909729472 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -6995 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-5 chr15 99875123 99875366 + 0.699649909729472 NA intron (NM_001113545, intron 1 of 10) CpG 212 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-26 chr7 143295191 143295547 + 0.699649909729472 NA non-coding (NR_001461, exon 1 of 1) non-coding (NR_001461, exon 1 of 1) 1178 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-8 chr15 81812849 81813257 + 0.699649909729472 NA intron (NM_017376, intron 1 of 3) MIRc|SINE|MIR 1639 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding unique_peak2_20_10_0.660158056955327_3.78951064711496_0.699649909729472 chr13 51333257 51333480 + 0.699649909729472 NA Intergenic B4A|SINE|B4 -75250 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-17 chr2 30710646 30711094 + 0.699649909729472 NA Intergenic Intergenic -10340 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-2 chr1 82809079 82809462 + 0.699649909729472 NA Intergenic Intergenic -30190 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak2_19_10_0.590265324334377_3.75456428080449_0.699649909729472-4 chr14 45657692 45657951 + 0.699649909729472 NA TTS (NR_039593) TTS (NR_039593) 232 NR_039593 100628600 NR_039593 ENSMUSG00000093167 Mir5131 mmu-mir-5131|mu-mir-5131 microRNA 5131 ncRNA unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-27 chr6 114963737 114964045 + 0.699649909729472 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 5312 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-5 chr11 101009650 101009849 + 0.699649909729472 NA intron (NM_001243049, intron 1 of 20) intron (NM_001243049, intron 1 of 20) 297 NM_001243051 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-4 chr11 78032586 78032793 + 0.699649909729472 NA promoter-TSS (NR_152257) promoter-TSS (NR_152257) -24 NR_152257 100504178 Mm.274329 NR_152257 ENSMUSG00000087050 Dhrs13os A030003K02Rik|AA682085 dehydrogenase/reductase (SDR family) member 13, opposite strand ncRNA common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-8 chr4 70409992 70410267 + 0.699649909729472 NA intron (NM_001313762, intron 1 of 33) CpG 306 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-7 chr17 34198049 34198436 + 0.699649909729472 NA promoter-TSS (NM_010724) promoter-TSS (NM_010724) 47 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-20 chr2 154407668 154407900 + 0.699649909729472 NA exon (NM_009228, exon 1 of 8) exon (NM_009228, exon 1 of 8) 300 NM_009228 20648 Mm.1541 NM_009228 ENSMUSG00000027488 Snta1 AW228934|Snt1 syntrophin, acidic 1 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-4 chr14 54685704 54685978 + 0.699649909729472 NA promoter-TSS (NM_021437) promoter-TSS (NM_021437) -330 NM_021437 58248 Mm.197509 NM_021437 ENSMUSG00000040822 1700123O20Rik MNCb-2990 RIKEN cDNA 1700123O20 gene protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-32 chr9 98657331 98657686 + 0.699649909729472 NA Intergenic Intergenic -55829 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding unique_peak1_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-2 chr6 36672422 36672646 + 0.699649909729472 NA Intergenic Intergenic 137645 NM_008973 19242 Mm.279690 NM_008973 ENSMUSG00000029838 Ptn HARP|HB-GAM|HBBM|HBBN|HBGF-8|HBNF|OSF|Osf-1|Osf1 pleiotrophin protein-coding common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-12 chr7 24904552 24904830 + 0.699649909729472 NA intron (NM_001130152, intron 1 of 28) intron (NM_001130152, intron 1 of 28) 345 NM_001130152 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-12 chr17 43754138 43754506 + 0.699649909729472 NA Intergenic Intergenic -47030 NM_001357742 53901 Mm.251242 NM_030598 ENSMUSG00000039601 Rcan2 Csp2|Dscr1l1|MCIP2|ZAKI-4 regulator of calcineurin 2 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-30 chr9 6265295 6265598 + 0.699649909729472 NA exon (NM_027942, exon 1 of 1) exon (NM_027942, exon 1 of 1) 1101 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-29 chr8 122523081 122523320 + 0.699649909729472 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 28129 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-17 chr17 78346848 78347334 + 0.699649909729472 NA exon (NM_015800, exon 11 of 17) exon (NM_015800, exon 11 of 17) 71061 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-12 chr15 78899796 78900044 + 0.699649909729472 NA exon (NM_001316684, exon 1 of 18) exon (NM_001316684, exon 1 of 18) 152 NM_009164 20401 Mm.4462 NM_009164 ENSMUSG00000022436 Sh3bp1 3BP-1 SH3-domain binding protein 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-28 chr7 16314315 16314666 + 0.699649909729472 NA intron (NM_133234, intron 3 of 3) intron (NM_133234, intron 3 of 3) 4907 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-8 chr12 80130441 80130722 + 0.699649909729472 NA intron (NR_033514, intron 2 of 2) intron (NR_033514, intron 2 of 2) 2263 NR_033514 69548 Mm.269712 NR_033514 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-4 chr17 45555890 45556150 + 0.699649909729472 NA exon (NM_001304956, exon 1 of 6) exon (NM_001304956, exon 1 of 6) 320 NM_001304956 18037 Mm.57043 NM_008690 ENSMUSG00000023947 Nfkbie I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-2 chr10 75252597 75252903 + 0.699649909729472 NA intron (NM_153406, intron 5 of 15) intron (NM_153406, intron 5 of 15) 40360 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-11 chr2 75682875 75683227 + 0.699649909729472 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 21612 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-13 chr14 33361262 33361642 + 0.699649909729472 NA intron (NM_153800, intron 6 of 10) intron (NM_153800, intron 6 of 10) 49572 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_20_10_0.660158056955327_3.78951064711496_0.699649909729472 chr11 49089955 49090210 + 0.699649909729472 NA intron (NM_008330, intron 1 of 1) L1_Mus2|LINE|L1 3065 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-3 chr6 34620259 34620536 + 0.699649909729472 NA intron (NM_001347100, intron 1 of 13) MLTR14|LTR|ERV1 21893 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-18 chr2 24949924 24950154 + 0.699649909729472 NA promoter-TSS (NM_147179) promoter-TSS (NM_147179) -119 NM_147179 67187 Mm.296106 NM_026021 ENSMUSG00000026974 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 protein-coding unique_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-22 chr3 79519390 79519704 + 0.699649909729472 NA intron (NM_001162999, intron 1 of 16) intron (NM_001162999, intron 1 of 16) 48132 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak1_19_10_0.590265324334377_3.75456428080449_0.699649909729472-10 chr2 165667491 165667797 + 0.699649909729472 NA intron (NM_001271962, intron 2 of 15) intron (NM_001271962, intron 2 of 15) 12346 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-9 chr16 86302143 86302400 + 0.699649909729472 NA Intergenic Intergenic -401146 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_20_10_0.660158056955327_3.78951064711496_0.699649909729472-12 chr2 150450715 150451170 + 0.699649909729472 NA intron (NM_001310645, intron 1 of 3) intron (NM_001310645, intron 1 of 3) 559 NM_001310645 668923 Mm.393876 NM_001177550 ENSMUSG00000068130 Zfp442 ZIPO-II zinc finger protein 442 protein-coding unique_peak2_11_17_-0.851994375423817_3.7439278137304_0.699649909729472-12 chr13 78163214 78163442 + 0.699649909729472 NA intron (NM_001163420, intron 8 of 8) CpG 33121 NM_001347538 13865 Mm.439653 NM_010151 ENSMUSG00000069171 Nr2f1 COUP-TF1|COUP-TFI|COUPTFA|EAR-3|EAR3|Erbal3|SVP44|Tcfcoup1 nuclear receptor subfamily 2, group F, member 1 protein-coding common_peak1_174_121_0.226165594590308_7.04382013485804_0.699595323113929 chr1 81744828 81746445 + 0.699595323113929 NA Intergenic Intergenic -386280 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA common_peak2_108_108_-0.28948943964848_6.62343960495269_0.699568771622236 chr9 121856959 121858318 + 0.699568771622236 NA 5' UTR (NM_001357839, exon 1 of 5) 5' UTR (NM_001357839, exon 1 of 5) 158 NM_001357841 56295 Mm.347915 NM_019814 ENSMUSG00000038412 Higd1a 2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1 HIG1 domain family, member 1A protein-coding common_peak1_83_54_0.324120002921476_5.9434197149854_0.699241046598679-2 chr7 116093352 116094239 + 0.699241046598679 NA promoter-TSS (NR_029433) promoter-TSS (NR_029433) 415 NM_019772 56372 Mm.24231 NM_019772 ENSMUSG00000030663 1110004F10Rik Smacp|Smap|sid2057|sid2057p RIKEN cDNA 1110004F10 gene protein-coding common_peak1_83_54_0.324120002921476_5.9434197149854_0.699241046598679 chr2 92009364 92010878 + 0.699241046598679 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 14049 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak2_65_69_-0.369272012120452_5.94464701088474_0.699241046598679 chr5 112342631 112343662 + 0.699241046598679 NA promoter-TSS (NM_027323) promoter-TSS (NM_027323) 51 NM_138646 192232 Mm.238043 NM_138646 ENSMUSG00000042328 Hps4 2010205O06Rik|AU040608|BLOC-3|C130020P05Rik|le|mKIAA1667 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 protein-coding common_peak2_83_54_0.324120002921476_5.9434197149854_0.699241046598679 chr1 155074028 155074735 + 0.699241046598679 NA intron (NR_151545, intron 3 of 6) intron (NR_151545, intron 3 of 6) 8883 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_83_54_0.324120002921476_5.9434197149854_0.699241046598679-2 chr15 75929028 75929658 + 0.699241046598679 NA intron (NM_001357005, intron 1 of 10) intron (NM_001357005, intron 1 of 10) 387 NM_031201 22122 Mm.22596 NM_031201 ENSMUSG00000022570 Tsta3 AI256181|FX|Tstap35b tissue specific transplantation antigen P35B protein-coding common_peak2_83_54_0.324120002921476_5.9434197149854_0.699241046598679-4 chr5 35673431 35673930 + 0.699241046598679 NA intron (NM_001042615, intron 1 of 6) intron (NM_001042615, intron 1 of 6) 6100 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak2_83_54_0.324120002921476_5.9434197149854_0.699241046598679-3 chr19 7294734 7295415 + 0.699241046598679 NA 5' UTR (NM_001080390, exon 1 of 18) 5' UTR (NM_001080390, exon 1 of 18) 373 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_75_78_-0.341672273205201_6.1329446115745_0.698968152417261-2 chr2 33467926 33468545 + 0.698968152417261 NA intron (NM_001355611, intron 1 of 2) CpG 297 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak2_74_78_-0.36064628379734_6.12345760627843_0.698968152417261 chr9 88092132 88093435 + 0.698968152417261 NA Intergenic Intergenic -234826 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_74_78_-0.36064628379734_6.12345760627843_0.698968152417261 chr19 28191265 28192307 + 0.698968152417261 NA Intergenic Intergenic -180620 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_75_78_-0.341672273205201_6.1329446115745_0.698968152417261 chr11 88999459 89000643 + 0.698968152417261 NA exon (NM_009546, exon 1 of 9) exon (NM_009546, exon 1 of 9) 648 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak2_94_62_0.304485450225864_6.12952264861285_0.698968152417249-2 chr12 3426900 3427603 + 0.698968152417249 NA promoter-TSS (NR_030694) promoter-TSS (NR_030694) 394 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2, transcriptional regulator protein-coding common_peak1_94_62_0.304485450225864_6.12952264861285_0.698968152417249-2 chr6 129229192 129230583 + 0.698968152417249 NA Intergenic Intergenic 8158 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_94_62_0.304485450225864_6.12952264861285_0.698968152417249-3 chr8 86801421 86802245 + 0.698968152417249 NA Intergenic Intergenic -55827 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak2_94_62_0.304485450225864_6.12952264861285_0.698968152417249 chr10 128626113 128626767 + 0.698968152417249 NA promoter-TSS (NM_013765) promoter-TSS (NM_013765) 66 NM_013765 27370 Mm.32118 NM_013765 ENSMUSG00000025362 Rps26 - ribosomal protein S26 protein-coding common_peak1_94_62_0.304485450225864_6.12952264861285_0.698968152417249 chr4 108459545 108460866 + 0.698968152417249 NA intron (NM_175472, intron 2 of 30) CpG-10127 779 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak1_191_133_0.223621517267746_7.17789994909164_0.698927777830625 chr19 3905042 3907017 + 0.698927777830625 NA promoter-TSS (NM_016921) promoter-TSS (NM_016921) -799 NM_016921 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak1_320_231_0.167965664555797_7.94196382740547_0.698497071178179 chr19 3767342 3768822 + 0.698497071178179 NA 5' UTR (NM_001167886, exon 2 of 11) 5' UTR (NM_001167886, exon 2 of 11) 661 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak1_242_172_0.1925348481451_7.53089565170927_0.698091026430414 chr13 103918208 103921160 + 0.698091026430414 NA intron (NM_001005868, intron 1 of 26) intron (NM_001005868, intron 1 of 26) 902 NM_001289473 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak1_210_198_-0.211737666385012_7.53075578735114_0.698091026430364 chr4 86856159 86857972 + 0.698091026430364 NA intron (NM_009096, intron 1 of 4) CpG 302 NM_009096 20104 Mm.379007 NM_009096 ENSMUSG00000028495 Rps6 S6R ribosomal protein S6 protein-coding common_peak1_210_198_-0.211737666385012_7.53075578735114_0.698091026430364-2 chr5 142817992 142820161 + 0.698091026430364 NA Intergenic Intergenic -1689 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-17 chr11 96305623 96305909 + 0.697979855752659 NA 3' UTR (NM_008268, exon 2 of 2) 3' UTR (NM_008268, exon 2 of 2) 1144 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-54 chr3 87913016 87913343 + 0.697979855752659 NA intron (NM_001331051, intron 2 of 6) intron (NM_001331051, intron 2 of 6) 6329 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-19 chr15 85680971 85681223 + 0.697979855752659 NA Intergenic Intergenic -22676 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-7 chr9 56869868 56870090 + 0.697979855752659 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 4875 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-51 chrX 102112786 102113111 + 0.697979855752659 NA Intergenic Intergenic -6517 NM_027181 69713 Mm.371635 NM_027181 ENSMUSG00000079480 Pin4 2410002I22Rik|EPVH|Par14 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-2 chr1 23258397 23258812 + 0.697979855752659 NA Intergenic Intergenic -13665 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659 chr1 178408787 178409085 + 0.697979855752659 NA intron (NM_026626, intron 1 of 6) intron (NM_026626, intron 1 of 6) 2918 NM_026626 68226 Mm.252132 NM_026626 ENSMUSG00000026495 Efcab2 1700073K01Rik|D830011E08Rik EF-hand calcium binding domain 2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-13 chr17 25258403 25258702 + 0.697979855752659 NA Intergenic Intergenic -2188 NM_001163270 545192 Mm.328859 NM_001163270 ENSMUSG00000047507 Baiap3 Bap3|Gm937 BAI1-associated protein 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-48 chr2 60869250 60869555 + 0.697979855752659 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 12036 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-21 chr16 30821221 30821436 + 0.697979855752659 NA Intergenic Intergenic 221605 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-2 chr11 72027109 72027493 + 0.697979855752659 NA Intergenic Intergenic 10208 NM_053245 114230 Mm.95707 NM_053245 ENSMUSG00000040554 Aipl1 A930007I01Rik aryl hydrocarbon receptor-interacting protein-like 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-24 chr17 30575655 30575862 + 0.697979855752659 NA intron (NM_172618, intron 1 of 11) CpG 529 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-34 chr8 69973309 69973531 + 0.697979855752659 NA intron (NM_001286450, intron 1 of 12) intron (NM_001286450, intron 1 of 12) 963 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-24 chr3 37880882 37881113 + 0.697979855752659 NA Intergenic Intergenic -17816 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-14 chr11 72153589 72153813 + 0.697979855752659 NA TTS (NM_028963) TTS (NM_028963) -17812 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-37 chr17 73804943 73805204 + 0.697979855752659 NA 5' UTR (NM_020578, exon 1 of 6) 5' UTR (NM_020578, exon 1 of 6) 232 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-60 chr5 31608988 31609313 + 0.697979855752659 NA Intergenic Intergenic -4801 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-9 chr12 31914079 31914356 + 0.697979855752659 NA intron (NM_001163126, intron 19 of 22) intron (NM_001163126, intron 19 of 22) 36028 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-45 chr2 33176730 33177055 + 0.697979855752659 NA intron (NM_001290570, intron 7 of 16) intron (NM_001290570, intron 7 of 16) -39069 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-3 chr1 64077673 64077979 + 0.697979855752659 NA intron (NM_033563, intron 2 of 3) intron (NM_033563, intron 2 of 3) -35325 NR_105864 102466760 NR_105864 ENSMUSG00000098487 Mir6899 Gm27384|mmu-mir-6899 microRNA 6899 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-71 chr6 94747937 94748182 + 0.697979855752659 NA Intergenic Intergenic -34797 NR_035483 unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-47 chr8 119809676 119809907 + 0.697979855752659 NA 3' UTR (NM_028071, exon 4 of 4) 3' UTR (NM_028071, exon 4 of 4) 30788 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-82 chr9 69334789 69335055 + 0.697979855752659 NA intron (NM_001289916, intron 1 of 9) intron (NM_001289916, intron 1 of 9) 29325 NR_136934 102642202 Mm.415363 NR_136934 ENSMUSG00000086648 Gm15511 - predicted gene 15511 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-56 chr4 137490245 137490469 + 0.697979855752659 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 21554 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-34 chr17 15053544 15053837 + 0.697979855752659 NA intron (NM_001360401, intron 13 of 18) intron (NM_001360401, intron 13 of 18) 631 NM_001034891 381062 Mm.393767 NM_183133 ENSMUSG00000036552 Ermard 2210404J11Rik|2410011O22Rik|AI448938 ER membrane associated RNA degradation protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-24 chr12 111697945 111698250 + 0.697979855752659 NA Intergenic Intergenic 14856 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-4 chr4 150058066 150058329 + 0.697979855752659 NA Intergenic Intergenic -10257 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-42 chr18 80047627 80047958 + 0.697979855752659 NA intron (NM_053117, intron 1 of 2) CpG 897 NM_053117 93737 Mm.24678 NM_053117 ENSMUSG00000056214 Pard6g 2410049N21Rik|Par6a par-6 family cell polarity regulator gamma protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-76 chr8 27008114 27008340 + 0.697979855752659 NA Intergenic Intergenic -15572 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-65 chr6 38913703 38913973 + 0.697979855752659 NA Intergenic Intergenic -5148 NM_011539 21391 Mm.4054 NM_011539 ENSMUSG00000029925 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-43 chr7 38018373 38018595 + 0.697979855752659 NA intron (NM_011274, intron 1 of 10) intron (NM_011274, intron 1 of 10) 1068 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-12 chr13 58534290 58534589 + 0.697979855752659 NA Intergenic Intergenic 76438 NM_022317 114304 Mm.18188 NM_022317 ENSMUSG00000021553 Slc28a3 Cnt3 solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-87 chrX 162991914 162992126 + 0.697979855752659 NA intron (NM_001168571, intron 14 of 16) intron (NM_001168571, intron 14 of 16) -27421 NM_009789 12309 Mm.6891 NM_009789 ENSMUSG00000040808 S100g AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3 S100 calcium binding protein G protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-30 chr2 163798827 163799109 + 0.697979855752659 NA Intergenic Intergenic -21866 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-11 chr11 8448634 8448842 + 0.697979855752659 NA exon (NM_001083587, exon 24 of 31) exon (NM_001083587, exon 24 of 31) 215797 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-8 chr11 99081154 99081403 + 0.697979855752659 NA intron (NM_172564, intron 2 of 12) intron (NM_172564, intron 2 of 12) 8028 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-12 chr16 31609431 31609670 + 0.697979855752659 NA Intergenic Intergenic -8583 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-51 chr2 152811084 152811377 + 0.697979855752659 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 17259 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-39 chr4 130672102 130672365 + 0.697979855752659 NA intron (NM_001356566, intron 2 of 17) intron (NM_001356566, intron 2 of 17) 8876 NM_001356564 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-30 chr7 29257299 29257620 + 0.697979855752659 NA intron (NM_001082548, intron 5 of 5) intron (NM_001082548, intron 5 of 5) -8992 NM_028179 72275 Mm.441142 NM_028179 ENSMUSG00000030587 2200002D01Rik 2010005J02Rik|H2RSP|IMUP|IMUP-1|IMUP-2 RIKEN cDNA 2200002D01 gene protein-coding unique_peak1_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-2 chrX 150812690 150812885 + 0.697979855752659 NA 5' UTR (NM_001358568, exon 1 of 12) 5' UTR (NM_001358568, exon 1 of 12) 192 NM_001358568 80884 Mm.22575 NM_030700 ENSMUSG00000025268 Maged2 4833439A22Rik|Mage-d2|ORF1 melanoma antigen, family D, 2 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-29 chr2 145292488 145292760 + 0.697979855752659 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 50013 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-7 chr14 25495264 25495491 + 0.697979855752659 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 36192 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-68 chr6 50530412 50530636 + 0.697979855752659 NA Intergenic Intergenic 35950 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-41 chr6 116694944 116695180 + 0.697979855752659 NA exon (NM_178768, exon 5 of 5) exon (NM_178768, exon 5 of 5) -21226 NM_178045 213391 Mm.257931 NM_178045 ENSMUSG00000042129 Rassf4 3830411C14Rik|AD037|AI586137 Ras association (RalGDS/AF-6) domain family member 4 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-20 chr18 80200377 80200595 + 0.697979855752659 NA exon (NM_199197, exon 1 of 6) exon (NM_199197, exon 1 of 6) 133 NM_199197 68731 Mm.186936 NM_199197 ENSMUSG00000024570 Rbfa 1110032A13Rik|AI595940 ribosome binding factor A protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-22 chr12 82189204 82189406 + 0.697979855752659 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 19289 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-4 chr1 74044304 74044527 + 0.697979855752659 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 80032 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-15 chr17 84624890 84625123 + 0.697979855752659 NA Intergenic Intergenic -1493 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-77 chr8 36184523 36184816 + 0.697979855752659 NA Intergenic Intergenic 28659 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-5 chr16 73482061 73482416 + 0.697979855752659 NA Intergenic Intergenic 819089 NM_019413 19876 Mm.310772 NM_019413 ENSMUSG00000022883 Robo1 AW494633|AW742721|DUTT1|Gm310 roundabout guidance receptor 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-22 chr16 34750802 34751090 + 0.697979855752659 NA Intergenic Intergenic -34004 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-10 chr12 108333662 108333930 + 0.697979855752659 NA promoter-TSS (NM_010010) promoter-TSS (NM_010010) -520 NM_010010 13116 Mm.41911 NM_010010 ENSMUSG00000021259 Cyp46a1 CH24H|Cyp46 cytochrome P450, family 46, subfamily a, polypeptide 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-31 chr16 24933502 24933729 + 0.697979855752659 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -126024 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-16 chr18 24837716 24837988 + 0.697979855752659 NA intron (NM_001289654, intron 3 of 24) intron (NM_001289654, intron 3 of 24) 129229 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-57 chr4 139255384 139255755 + 0.697979855752659 NA intron (NM_001037761, intron 2 of 9) intron (NM_001037761, intron 2 of 9) 55139 NR_151463 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-84 chr9 110867881 110868077 + 0.697979855752659 NA intron (NM_146260, intron 4 of 5) intron (NM_146260, intron 4 of 5) 10012 NM_146227 235631 Mm.102265 NM_146227 ENSMUSG00000048752 Prss50 79H19C|Tsp50 protease, serine 50 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-25 chr3 122483173 122483418 + 0.697979855752659 NA promoter-TSS (NM_001355264) promoter-TSS (NM_001355264) -274 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659 chr1 33724862 33725064 + 0.697979855752659 NA exon (NM_008999, exon 4 of 8) exon (NM_008999, exon 4 of 8) 4544 NM_001159729 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-43 chr19 5572893 5573118 + 0.697979855752659 NA Intergenic Intergenic 4981 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962|beta-5 adaptor-related protein complex 5, beta 1 subunit protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-49 chr2 70125893 70126179 + 0.697979855752659 NA intron (NM_177376, intron 7 of 34) intron (NM_177376, intron 7 of 34) 86910 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-7 chr11 32346417 32346772 + 0.697979855752659 NA Intergenic Intergenic -1217 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-7 chr1 159104328 159104520 + 0.697979855752659 NA Intergenic Intergenic -127776 NM_001360878 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Cop1 AI316802|C80879|Rfwd2 COP1, E3 ubiquitin ligase protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-42 chr6 145339223 145339422 + 0.697979855752659 NA Intergenic Intergenic -48303 NR_003625 381827 Mm.179075 NM_001001987 1700073E17Rik - ribosomal protein L7 pseudogene pseudo unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-31 chr7 30090157 30090387 + 0.697979855752659 NA intron (NM_152814, intron 1 of 3) intron (NM_152814, intron 1 of 3) 238 NM_152814 72556 Mm.441512 NM_152814 ENSMUSG00000078768 Zfp566 2700043M03Rik|mszf4 zinc finger protein 566 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-32 chr7 84748753 84748988 + 0.697979855752659 NA intron (NR_038175, intron 2 of 4) intron (NR_038175, intron 2 of 4) -58913 NM_001360582 65098 Mm.209349 NM_022985 ENSMUSG00000030629 Zfand6 3110005P07Rik|Awp1|Za20d3 zinc finger, AN1-type domain 6 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-12 chr11 19979634 19979830 + 0.697979855752659 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 55290 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-31 chr3 15196095 15196337 + 0.697979855752659 NA Intergenic Intergenic 136086 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-52 chr2 163397952 163398210 + 0.697979855752659 NA promoter-TSS (NM_001205076) promoter-TSS (NM_001205076) -88 NM_001205076 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-49 chr9 77910098 77910354 + 0.697979855752659 NA Intergenic Intergenic -7139 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-17 chr15 58358407 58358609 + 0.697979855752659 NA intron (NM_027211, intron 2 of 8) intron (NM_027211, intron 2 of 8) 30766 NM_027211 69787 Mm.237985 NM_027211 Anxa13 1810034H17Rik|AV055219 annexin A13 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-79 chr8 108368435 108368675 + 0.697979855752659 NA Intergenic Intergenic 216122 NR_077224 109215 Mm.65282 NR_077224 ENSMUSG00000110613 Lncbate1 3010033K07Rik|Lnc-BATE1 brown adipose tissue enriched long non-coding RNA 1 ncRNA unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-37 chr4 89519840 89520179 + 0.697979855752659 NA Intergenic Intergenic -168189 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-2 chr1 75248344 75248558 + 0.697979855752659 NA intron (NM_001359281, intron 20 of 22) intron (NM_001359281, intron 20 of 22) 11749 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-6 chr7 144635818 144636013 + 0.697979855752659 NA intron (NM_001242349, intron 11 of 24) intron (NM_001242349, intron 11 of 24) -53479 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-40 chr5 93204754 93204990 + 0.697979855752659 NA intron (NM_017367, intron 1 of 6) intron (NM_017367, intron 1 of 6) 1623 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-40 chr18 44611747 44612055 + 0.697979855752659 NA intron (NM_001085373, intron 3 of 18) intron (NM_001085373, intron 3 of 18) -49764 NR_026853 626275 Mm.427116 NR_026853 ENSMUSG00000097610 A930012L18Rik - RIKEN cDNA A930012L18 gene ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-28 chr15 76242405 76242634 + 0.697979855752659 NA exon (NM_001163575, exon 4 of 11) exon (NM_001163575, exon 4 of 11) 921 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-50 chrX 74429939 74430152 + 0.697979855752659 NA promoter-TSS (NM_008062) promoter-TSS (NM_008062) 364 NM_010547 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-6 chr10 121428292 121428537 + 0.697979855752659 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 47836 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-39 chr18 16749050 16749461 + 0.697979855752659 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 59991 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-16 chr11 87579277 87579501 + 0.697979855752659 NA intron (NM_001284398, intron 1 of 10) intron (NM_001284398, intron 1 of 10) 1000 NM_001284398 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|Pnutl2 septin 4 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-14 chr17 80775723 80775944 + 0.697979855752659 NA Intergenic Intergenic -47808 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659 chr13 45960329 45960556 + 0.697979855752659 NA intron (NM_001199304, intron 1 of 6) intron (NM_001199304, intron 1 of 6) 4549 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-34 chr3 122058503 122058929 + 0.697979855752659 NA intron (NM_007378, intron 4 of 49) intron (NM_007378, intron 4 of 49) 14256 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-5 chr6 94303189 94303385 + 0.697979855752659 NA Intergenic Intergenic -19370 NM_001286785 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-74 chr7 144246905 144247105 + 0.697979855752659 NA intron (NM_001113373, intron 4 of 15) intron (NM_001113373, intron 4 of 15) -37380 NM_001081370 210274 Mm.483624 NM_001081370 ENSMUSG00000037541 Shank2 ProSAP1|mKIAA1022 SH3 and multiple ankyrin repeat domains 2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-5 chr12 73295243 73295520 + 0.697979855752659 NA intron (NM_001037717, intron 3 of 15) intron (NM_001037717, intron 3 of 15) 8533 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-33 chr7 118854981 118855211 + 0.697979855752659 NA promoter-TSS (NM_001081446) promoter-TSS (NM_001081446) 517 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-23 chr12 100443737 100444044 + 0.697979855752659 NA intron (NM_001033213, intron 5 of 19) intron (NM_001033213, intron 5 of 19) 76932 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-23 chr2 73604700 73604903 + 0.697979855752659 NA intron (NR_040623, intron 1 of 3) intron (NR_040623, intron 1 of 3) 8275 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-36 chr17 73252552 73252820 + 0.697979855752659 NA Intergenic Intergenic 144701 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-55 chr3 94309756 94309980 + 0.697979855752659 NA promoter-TSS (NM_029431) promoter-TSS (NM_029431) -264 NM_029431 75778 Mm.45092 NM_029431 ENSMUSG00000028145 Them4 2700077M13Rik|4921507I02Rik thioesterase superfamily member 4 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-70 chr6 86687325 86687590 + 0.697979855752659 NA Intergenic Intergenic -2966 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-9 chr15 27482149 27482473 + 0.697979855752659 NA intron (NM_020332, intron 1 of 11) intron (NM_020332, intron 1 of 11) 15634 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-4 chr14 8305910 8306150 + 0.697979855752659 NA intron (NM_001360337, intron 1 of 4) intron (NM_001360337, intron 1 of 4) 3747 NM_183187 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-33 chr16 90935218 90935471 + 0.697979855752659 NA promoter-TSS (NM_026502) promoter-TSS (NM_026502) -495 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-81 chr9 21131531 21131719 + 0.697979855752659 NA promoter-TSS (NM_018793) promoter-TSS (NM_018793) -350 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-18 chr18 38515192 38515459 + 0.697979855752659 NA Intergenic Intergenic 85943 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-29 chr15 99253285 99253578 + 0.697979855752659 NA intron (NR_045627, intron 1 of 2) intron (NR_045627, intron 1 of 2) -1470 NM_016766 51812 Mm.383472 NM_016766 ENSMUSG00000037570 Mcrs1 C78274|ICP22BP|MSP58|P78 microspherule protein 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-41 chr18 61381903 61382166 + 0.697979855752659 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 15866 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-44 chr7 84557374 84557628 + 0.697979855752659 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 28547 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-64 chr6 37402525 37402955 + 0.697979855752659 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 39408 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-9 chr10 79996645 79996902 + 0.697979855752659 NA promoter-TSS (NM_013850) promoter-TSS (NM_013850) -835 NM_001347081 27403 Mm.103351 NM_013850 ENSMUSG00000035722 Abca7 ABCX|Abc51 ATP-binding cassette, sub-family A (ABC1), member 7 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-75 chr8 17555753 17555942 + 0.697979855752659 NA Intergenic Intergenic -20462 NM_053171 94109 Mm.436988 NM_053171 ENSMUSG00000060924 Csmd1 B930082H09|mKIAA1890 CUB and Sushi multiple domains 1 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-28 chr4 89466791 89467125 + 0.697979855752659 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -155926 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-5 chr10 111654167 111654378 + 0.697979855752659 NA Intergenic B1F|SINE|Alu -59999 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-19 chr11 116334835 116335126 + 0.697979855752659 NA intron (NM_008240, intron 1 of 2) CpG 374 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-58 chr4 140637349 140637638 + 0.697979855752659 NA intron (NM_001290803, intron 1 of 28) intron (NM_001290803, intron 1 of 28) 11263 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-30 chr16 10972358 10972603 + 0.697979855752659 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 20641 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-15 chr15 53001291 53001567 + 0.697979855752659 NA Intergenic Intergenic 288984 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-3 chr19 41345292 41345530 + 0.697979855752659 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 39659 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-5 chr1 92015121 92015391 + 0.697979855752659 NA intron (NM_207225, intron 4 of 26) intron (NM_207225, intron 4 of 26) 165085 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659 chr10 60935078 60935403 + 0.697979855752659 NA intron (NR_033616, intron 1 of 2) intron (NR_033616, intron 1 of 2) 2892 NR_033616 73616 Mm.159038 NR_033616 ENSMUSG00000037247 Pldi 1700125F08Rik|Poldi polymorphic derived intron containing ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-67 chr6 47781140 47781467 + 0.697979855752659 NA Intergenic Intergenic 22349 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-20 chr12 17544443 17544643 + 0.697979855752659 NA promoter-TSS (NM_013614) promoter-TSS (NM_013614) -330 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-28 chr2 132143755 132144106 + 0.697979855752659 NA intron (NM_001355430, intron 1 of 15) intron (NM_001355430, intron 1 of 15) 1178 NM_001355431 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-38 chr4 129818698 129818990 + 0.697979855752659 NA Intergenic Intergenic -1635 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-6 chr13 16740011 16740423 + 0.697979855752659 NA Intergenic Intergenic -716794 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659 chr12 64964952 64965185 + 0.697979855752659 NA promoter-TSS (NM_177805) promoter-TSS (NM_177805) 468 NM_025707 66689 Mm.248678 NM_025707 ENSMUSG00000020948 Klhl28 2810440N09Rik|4122402F11Rik|4931401E10Rik|Btbd5 kelch-like 28 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-83 chr9 99134375 99134704 + 0.697979855752659 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 5672 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-6 chr9 7501438 7501662 + 0.697979855752659 NA promoter-TSS (NM_019471) promoter-TSS (NM_019471) -792 NM_019471 17384 Mm.14126 NM_019471 ENSMUSG00000047562 Mmp10 AV377895|MMP-10|SL-2 matrix metallopeptidase 10 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-16 chr15 56695015 56695344 + 0.697979855752659 NA promoter-TSS (NM_008216) promoter-TSS (NM_008216) -633 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-18 chr11 100389906 100390198 + 0.697979855752659 NA intron (NM_010593, intron 1 of 13) intron (NM_010593, intron 1 of 13) 7738 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-4 chr10 67460902 67461110 + 0.697979855752659 NA Intergenic Intergenic -76863 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-29 chr5 27790327 27790596 + 0.697979855752659 NA intron (NM_018878, intron 1 of 20) intron (NM_018878, intron 1 of 20) 1089 NM_018878 55982 Mm.277190 NM_018878 ENSMUSG00000002221 Paxip1 D5Ertd149e|PTIP PAX interacting (with transcription-activation domain) protein 1 protein-coding unique_peak1_8_13_-0.901533714238411_3.3565880649384_0.697979855752659 chr5 125267138 125267332 + 0.697979855752659 NA Intergenic Intergenic 73859 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-3 chr11 115949703 115949930 + 0.697979855752659 NA intron (NM_020483, intron 3 of 10) intron (NM_020483, intron 3 of 10) 16157 NM_020483 57230 Mm.267810 NM_020483 ENSMUSG00000020755 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-25 chr18 60633280 60633567 + 0.697979855752659 NA Intergenic Intergenic -9118 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-35 chr3 142375524 142375810 + 0.697979855752659 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 16183 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-3 chr13 77708670 77708880 + 0.697979855752659 NA promoter-TSS (NM_001163419) promoter-TSS (NM_001163419) 85 NM_001163419 68675 Mm.343005 NM_138312 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-17 chr18 32149539 32149839 + 0.697979855752659 NA Intergenic Intergenic -10119 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-35 chr9 64115128 64115379 + 0.697979855752659 NA Intergenic Intergenic -1894 NM_145835 235435 Mm.436581 NM_145835 ENSMUSG00000032401 Lctl E130104I05Rik|KLPH lactase-like protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-21 chr12 33236114 33236303 + 0.697979855752659 NA intron (NM_028139, intron 3 of 3) intron (NM_028139, intron 3 of 3) -66307 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-26 chr3 122517049 122517408 + 0.697979855752659 NA intron (NM_013867, intron 7 of 11) intron (NM_013867, intron 7 of 11) 24453 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-25 chr13 29574640 29574919 + 0.697979855752659 NA intron (NR_131896, intron 9 of 16) intron (NR_131896, intron 9 of 16) 280894 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-86 chrX 152768896 152769126 + 0.697979855752659 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 475 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-11 chr15 83442716 83442915 + 0.697979855752659 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 5065 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-38 chr18 4675114 4675333 + 0.697979855752659 NA exon (NM_001081963, exon 3 of 4) exon (NM_001081963, exon 3 of 4) 40294 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak2_15_7_0.730040044217796_3.3650200221089_0.697979855752659-2 chr7 19001322 19001529 + 0.697979855752659 NA 3' UTR (NM_145579, exon 3 of 3) 3' UTR (NM_145579, exon 3 of 3) -2640 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-32 chr3 38482508 38482756 + 0.697979855752659 NA intron (NM_001167883, intron 2 of 3) intron (NM_001167883, intron 2 of 3) 2184 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-2 chr7 133792250 133792451 + 0.697979855752659 NA intron (NM_025850, intron 1 of 10) intron (NM_025850, intron 1 of 10) -9565 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-72 chr7 73516790 73517011 + 0.697979855752659 NA intron (NM_001081345, intron 3 of 38) intron (NM_001081345, intron 3 of 38) 24846 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-61 chr5 32153650 32153961 + 0.697979855752659 NA 3' UTR (NM_008037, exon 4 of 4) 3' UTR (NM_008037, exon 4 of 4) 17333 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-6 chr1 135827819 135828098 + 0.697979855752659 NA exon (NM_133664, exon 3 of 10) exon (NM_133664, exon 3 of 10) -8376 NM_011619 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-46 chr2 49619645 49619952 + 0.697979855752659 NA intron (NM_008449, intron 1 of 25) CpG 484 NM_008449 16574 Mm.256342 NM_008449 ENSMUSG00000026764 Kif5c KINN|Khc|NKHC|NKHC2 kinesin family member 5C protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-3 chr1 88912709 88913010 + 0.697979855752659 NA Intergenic MTE2a|LTR|ERVL-MaLR -103254 NR_040471 73475 Mm.491040 NR_040471 ENSMUSG00000099378 1700067G17Rik - RIKEN cDNA 1700067G17 gene ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-66 chr6 43255317 43255518 + 0.697979855752659 NA Intergenic Intergenic -10227 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-27 chr15 57987016 57987264 + 0.697979855752659 NA intron (NM_173862, intron 1 of 3) intron (NM_173862, intron 1 of 3) 1237 NM_173862 239463 Mm.221241 NM_173862 ENSMUSG00000051225 Fam83a - family with sequence similarity 83, member A protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-46 chr8 79083307 79083510 + 0.697979855752659 NA intron (NM_001294279, intron 4 of 14) intron (NM_001294279, intron 4 of 14) 54971 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-36 chr4 89381933 89382143 + 0.697979855752659 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -71006 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-50 chr2 118123459 118123785 + 0.697979855752659 NA intron (NM_001313914, intron 19 of 21) intron (NM_001313914, intron 19 of 21) 11746 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-15 chr11 83940225 83940468 + 0.697979855752659 NA Intergenic Intergenic -1744 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-10 chr10 96804590 96804961 + 0.697979855752659 NA Intergenic Intergenic 187774 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-69 chr6 86324993 86325394 + 0.697979855752659 NA Intergenic Intergenic -40490 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-33 chr3 98328608 98328933 + 0.697979855752659 NA intron (NM_016966, intron 3 of 11) intron (NM_016966, intron 3 of 11) 11199 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-4 chr12 16873298 16873518 + 0.697979855752659 NA Intergenic Intergenic -21570 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-26 chr2 60713813 60714095 + 0.697979855752659 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 8649 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-22 chr2 50444687 50444999 + 0.697979855752659 NA Intergenic Intergenic 89818 NR_154590 102634280 NR_154590 Gm48908 - predicted gene 48908 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-26 chr13 108693429 108693625 + 0.697979855752659 NA intron (NM_011056, intron 1 of 16) intron (NM_011056, intron 1 of 16) 39350 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659 chr1 16107819 16108088 + 0.697979855752659 NA exon (NM_133832, exon 2 of 6) exon (NM_133832, exon 2 of 6) 2071 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-73 chr7 143692630 143692877 + 0.697979855752659 NA intron (NM_001199227, intron 20 of 21) intron (NM_001199227, intron 20 of 21) -6878 NR_131763 79201 Mm.290780 NM_024290 ENSMUSG00000037613 Tnfrsf23 SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB tumor necrosis factor receptor superfamily, member 23 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-63 chr5 140438708 140439179 + 0.697979855752659 NA intron (NM_133916, intron 13 of 18) intron (NM_133916, intron 13 of 18) 11604 NR_106005 102466792 NR_106005 ENSMUSG00000098319 Mir7038 Gm27955|mmu-mir-7038 microRNA 7038 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-35 chr17 32024756 32025079 + 0.697979855752659 NA intron (NM_028902, intron 2 of 7) intron (NM_028902, intron 2 of 7) 9591 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-21 chr19 38614779 38615103 + 0.697979855752659 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 90744 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak1_8_13_-0.901533714238411_3.3565880649384_0.697979855752659 chr18 81320113 81320303 + 0.697979855752659 NA Intergenic Intergenic -333630 NM_178280 20689 Mm.215917 NM_178280 ENSMUSG00000024565 Sall3 B130022O04Rik|Msal|Msal-1|Sal|Salt|Spalt spalt like transcription factor 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-59 chr5 23617035 23617233 + 0.697979855752659 NA promoter-TSS (NM_009274) promoter-TSS (NM_009274) -563 NM_009274 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-10 chr15 81856561 81856786 + 0.697979855752659 NA intron (NM_020507, intron 1 of 1) intron (NM_020507, intron 1 of 1) 1653 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-88 chrX 169884137 169884392 + 0.697979855752659 NA intron (NM_001290505, intron 1 of 9) intron (NM_001290505, intron 1 of 9) 4645 NM_001290505 17318 Mm.34441 NM_010797 ENSMUSG00000035299 Mid1 61B3-R|DXHXS1141|Fxy|Trim18 midline 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-62 chr5 105701581 105701875 + 0.697979855752659 NA intron (NM_178701, intron 1 of 2) intron (NM_178701, intron 1 of 2) 918 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-78 chr8 60860985 60861338 + 0.697979855752659 NA Intergenic Intergenic -29232 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-23 chr17 6164712 6164923 + 0.697979855752659 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 26669 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-18 chr15 62291659 62291956 + 0.697979855752659 NA Intergenic Intergenic -72356 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-19 chr18 56894509 56894734 + 0.697979855752659 NA intron (NM_177115, intron 1 of 4) intron (NM_177115, intron 1 of 4) 30927 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-47 chr2 52965310 52965626 + 0.697979855752659 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 107600 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-85 chrX 145469500 145469795 + 0.697979855752659 NA intron (NM_001290274, intron 5 of 8) intron (NM_001290274, intron 5 of 8) 17992 NM_001290274 27494 Mm.100068 NM_153319 ENSMUSG00000041688 Amot CAG-2|D0Kist1|Sii6 angiomotin protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-45 chr7 111024473 111024740 + 0.697979855752659 NA Intergenic Intergenic -4345 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-11 chr13 6475931 6476249 + 0.697979855752659 NA Intergenic Intergenic -72067 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-32 chr16 30503495 30503737 + 0.697979855752659 NA Intergenic Intergenic 46962 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-13 chr13 104518439 104518644 + 0.697979855752659 NA Intergenic Intergenic 230706 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-3 chr9 78520237 78520466 + 0.697979855752659 NA Intergenic Intergenic -38627 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-27 chr3 138063741 138063972 + 0.697979855752659 NA intron (NR_037975, intron 1 of 3) intron (NR_037975, intron 1 of 3) 3532 NR_037975 329763 Mm.169710 NM_177860 ENSMUSG00000049349 Gm5105 D830013H12|EG329763 predicted gene 5105 ncRNA unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-13 chr11 57913475 57913684 + 0.697979855752659 NA Intergenic Intergenic -81432 NM_008213 15110 Mm.4746 NM_008213 ENSMUSG00000037335 Hand1 Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND heart and neural crest derivatives expressed 1 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-20 chr15 96882281 96882562 + 0.697979855752659 NA Intergenic Intergenic 137938 NM_001358060 69354 Mm.250980 NM_027052 ENSMUSG00000022464 Slc38a4 1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3 solute carrier family 38, member 4 protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-27 chr2 90678889 90679099 + 0.697979855752659 NA intron (NM_021512, intron 1 of 36) intron (NM_021512, intron 1 of 36) 1779 NM_021512 59015 Mm.24532 NM_021512 ENSMUSG00000051329 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197 nucleoporin 160 protein-coding unique_peak2_7_13_-1.07025989826656_3.27222497292432_0.697979855752659-8 chr15 11796454 11796706 + 0.697979855752659 NA Intergenic Intergenic 109094 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-2 chr11 119856389 119856632 + 0.697979855752659 NA intron (NM_028898, intron 18 of 33) intron (NM_028898, intron 18 of 33) -22145 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-2 chr19 3928915 3929129 + 0.697979855752659 NA intron (NM_026316, intron 1 of 9) intron (NM_026316, intron 1 of 9) 694 NM_026316 67689 Mm.109341 NM_026316 ENSMUSG00000024885 Aldh3b1 1700001N19Rik|ALDH4|ALDH7 aldehyde dehydrogenase 3 family, member B1 protein-coding common_peak2_15_7_0.730040044217796_3.3650200221089_0.697979855752659 chr15 86054358 86054594 + 0.697979855752659 NA Intergenic Intergenic -3219 NM_172611 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-44 chr2 24471436 24471679 + 0.697979855752659 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 4042 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-8 chr1 161452210 161452513 + 0.697979855752659 NA Intergenic Intergenic -42296 NM_183391 240873 Mm.276823 NM_183391 ENSMUSG00000066755 Tnfsf18 Gitrl|Tnlg2a tumor necrosis factor (ligand) superfamily, member 18 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-80 chr8 110760548 110760800 + 0.697979855752659 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 34948 NM_001310591 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-14 chr13 119408582 119408902 + 0.697979855752659 NA intron (NM_001308506, intron 1 of 16) intron (NM_001308506, intron 1 of 16) 269 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding unique_peak2_8_13_-0.901533714238411_3.3565880649384_0.697979855752659-48 chr9 20823333 20823624 + 0.697979855752659 NA exon (NM_001030290, exon 3 of 6) exon (NM_001030290, exon 3 of 6) 4974 NM_001030290 235033 Mm.297661 NM_001030290 ENSMUSG00000053773 Rdh8 Gm182|prRDH retinol dehydrogenase 8 protein-coding unique_peak1_15_7_0.730040044217796_3.3650200221089_0.697979855752659-53 chr2 176709070 176709315 + 0.697979855752659 NA intron (NM_001099327, intron 1 of 4) intron (NM_001099327, intron 1 of 4) 839 NM_001099327 100043387 Mm.444048 NM_001099327 ENSMUSG00000078878 Gm14305 - predicted gene 14305 protein-coding common_peak1_97_98_-0.303053456286799_6.47782989193621_0.696963190089479 chr1 131525868 131527305 + 0.696963190089479 NA intron (NM_001081011, intron 1 of 22) CpG 775 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak2_97_98_-0.303053456286799_6.47782989193621_0.696963190089479 chr2 180589253 180590483 + 0.696963190089479 NA intron (NM_031373, intron 1 of 6) intron (NM_031373, intron 1 of 6) 461 NM_031373 72075 Mm.250418 NM_031373 ENSMUSG00000049401 Ogfr 2010013E17Rik opioid growth factor receptor protein-coding common_peak2_97_98_-0.303053456286799_6.47782989193621_0.696963190089479-3 chr9 70679046 70680062 + 0.696963190089479 NA intron (NM_007399, intron 1 of 15) CpG 572 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak2_97_98_-0.303053456286799_6.47782989193621_0.696963190089479-2 chr5 23418053 23419400 + 0.696963190089479 NA Intergenic Intergenic 15627 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_63_40_0.358378080453224_5.5367410448447_0.696926118858569-5 chr8 33896705 33897015 + 0.696926118858569 NA intron (NM_001042675, intron 1 of 6) B1_Mm|SINE|Alu 33003 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_47_53_-0.451066835291463_5.52935408451774_0.696926118858569 chr17 5822931 5823364 + 0.696926118858569 NA Intergenic Intergenic -18233 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak2_48_53_-0.421529358797414_5.54412282276476_0.696926118858569 chr11 102284974 102285611 + 0.696926118858569 NA 5' UTR (NM_001302505, exon 1 of 3) 5' UTR (NM_001302505, exon 1 of 3) 353 NM_001302505 72053 Mm.101274 NM_028076 ENSMUSG00000034757 Tmub2 2010008E23Rik transmembrane and ubiquitin-like domain containing 2 protein-coding common_peak2_48_53_-0.421529358797414_5.54412282276476_0.696926118858569-5 chr9 32709641 32710343 + 0.696926118858569 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 13950 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_63_40_0.358378080453224_5.5367410448447_0.696926118858569-4 chr4 151995344 151996053 + 0.696926118858569 NA intron (NM_172705, intron 1 of 3) CpG 481 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak1_64_40_0.380588089017664_5.54784604912692_0.696926118858569-3 chr6 43665322 43666167 + 0.696926118858569 NA intron (NM_013861, intron 2 of 8) intron (NM_013861, intron 2 of 8) 534 NM_013861 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding common_peak2_63_40_0.358378080453224_5.5367410448447_0.696926118858569-2 chr17 56717860 56718201 + 0.696926118858569 NA promoter-TSS (NM_001166474) promoter-TSS (NM_001166474) 268 NM_027244 69875 Mm.279823 NM_027244 ENSMUSG00000002379 Ndufa11 2010012C24Rik|AV006275|B14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11 protein-coding common_peak2_63_40_0.358378080453224_5.5367410448447_0.696926118858569-3 chr18 57354769 57355378 + 0.696926118858569 NA intron (NM_028447, intron 1 of 8) CpG 340 NM_028447 73137 Mm.29889 NM_028447 ENSMUSG00000024594 Prrc1 1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik proline-rich coiled-coil 1 protein-coding common_peak2_48_53_-0.421529358797414_5.54412282276476_0.696926118858569-3 chr2 75685534 75686391 + 0.696926118858569 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 18701 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_64_40_0.380588089017664_5.54784604912692_0.696926118858569-4 chr9 65294369 65295048 + 0.696926118858569 NA intron (NM_001044389, intron 1 of 12) CpG 448 NM_001044389 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding common_peak2_47_53_-0.451066835291463_5.52935408451774_0.696926118858569-4 chr9 71805969 71806558 + 0.696926118858569 NA Intergenic Intergenic -34661 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_47_53_-0.451066835291463_5.52935408451774_0.696926118858569-2 chr15 27997996 27998602 + 0.696926118858569 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 27549 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_64_40_0.380588089017664_5.54784604912692_0.696926118858569-3 chr19 43524681 43525211 + 0.696926118858569 NA promoter-TSS (NM_010324) promoter-TSS (NM_010324) -341 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_63_40_0.358378080453224_5.5367410448447_0.696926118858569-5 chr6 146911059 146912089 + 0.696926118858569 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 23080 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_47_53_-0.451066835291463_5.52935408451774_0.696926118858569 chr12 83950662 83951392 + 0.696926118858569 NA exon (NM_023633, exon 1 of 1) exon (NM_023633, exon 1 of 1) 419 NM_023633 71952 Mm.251483 NM_023633 ENSMUSG00000046791 Riox1 2410016O06Rik|MAPJD|NO66 ribosomal oxygenase 1 protein-coding common_peak1_64_40_0.380588089017664_5.54784604912692_0.696926118858569-2 chr5 72558857 72559531 + 0.696926118858569 NA exon (NM_133921, exon 2 of 23) exon (NM_133921, exon 2 of 23) 451 NM_001359837 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding common_peak2_63_40_0.358378080453224_5.5367410448447_0.696926118858569 chr11 54787091 54787579 + 0.696926118858569 NA intron (NM_178626, intron 1 of 5) CpG 368 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak1_63_40_0.358378080453224_5.5367410448447_0.696926118858569 chr1 34851811 34852614 + 0.696926118858569 NA intron (NM_145516, intron 1 of 7) intron (NM_145516, intron 1 of 7) 2223 NM_001357425 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding common_peak2_64_40_0.380588089017664_5.54784604912692_0.696926118858569 chr12 76961526 76962063 + 0.696926118858569 NA intron (NM_001361663, intron 1 of 4) CpG 454 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_63_40_0.358378080453224_5.5367410448447_0.696926118858569-3 chr18 43437720 43438484 + 0.696926118858569 NA exon (NM_001291455, exon 1 of 14) exon (NM_001291455, exon 1 of 14) 184 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak2_48_53_-0.421529358797414_5.54412282276476_0.696926118858569-2 chr2 59613081 59613483 + 0.696926118858569 NA intron (NM_198294, intron 1 of 26) intron (NM_198294, intron 1 of 26) 1240 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak2_47_53_-0.451066835291463_5.52935408451774_0.696926118858569-3 chr2 116978666 116979674 + 0.696926118858569 NA Intergenic Intergenic 79018 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak1_64_40_0.380588089017664_5.54784604912692_0.696926118858569 chr10 117224273 117224744 + 0.696926118858569 NA promoter-TSS (NM_026570) promoter-TSS (NM_026570) -1 NM_026570 64050 Mm.233529 NM_026570 ENSMUSG00000020171 Yeats4 4930573H17Rik|B230215M10Rik|GAS41|NuBI-1 YEATS domain containing 4 protein-coding common_peak1_48_53_-0.421529358797414_5.54412282276476_0.696926118858569 chr5 25529919 25530501 + 0.696926118858569 NA non-coding (NR_027388, exon 1 of 1) non-coding (NR_027388, exon 1 of 1) 192 NR_027388 73571 Mm.105263 NR_027388 ENSMUSG00000101856 1700096K18Rik - RIKEN cDNA 1700096K18 gene ncRNA common_peak2_64_40_0.380588089017664_5.54784604912692_0.696926118858569-2 chr15 83440128 83440644 + 0.696926118858569 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 7494 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_63_40_0.358378080453224_5.5367410448447_0.696926118858569-2 chr17 84182212 84182763 + 0.696926118858569 NA Intergenic Intergenic 5460 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_63_40_0.358378080453224_5.5367410448447_0.696926118858569-6 chr9 66240965 66241839 + 0.696926118858569 NA intron (NM_010019, intron 4 of 11) intron (NM_010019, intron 4 of 11) 83176 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak2_63_40_0.358378080453224_5.5367410448447_0.696926118858569-4 chr2 13544442 13545059 + 0.696926118858569 NA promoter-TSS (NM_010067) promoter-TSS (NM_010067) -86 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak2_48_53_-0.421529358797414_5.54412282276476_0.696926118858569-4 chr5 31566048 31566904 + 0.696926118858569 NA Intergenic Intergenic 4921 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_176_122_0.230667202637649_7.05784810665806_0.696591702454409 chr13 110927492 110929601 + 0.696591702454409 NA Intergenic Intergenic -24700 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_107_71_0.295566869884603_6.31770843638461_0.696474447554397-2 chr2 71211753 71212591 + 0.696474447554397 NA intron (NM_001347173, intron 1 of 17) CpG 226 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding common_peak1_107_71_0.295566869884603_6.31770843638461_0.696474447554397 chr2 31152172 31153374 + 0.696474447554397 NA promoter-TSS (NR_040334) promoter-TSS (NR_040334) 457 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_106_71_0.282241035586846_6.31104551923574_0.696474447554397 chr9 57589510 57590699 + 0.696474447554397 NA intron (NM_027895, intron 1 of 15) intron (NM_027895, intron 1 of 15) 652 NM_027895 71742 Mm.155877 NM_027895 ENSMUSG00000032308 Ulk3 1200015E14Rik unc-51-like kinase 3 protein-coding common_peak2_86_88_-0.319984807361677_6.31574102728556_0.696474447554397 chr4 63047653 63048627 + 0.696474447554397 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 82566 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak1_146_100_0.24892728326847_6.78267512438603_0.696388786569421 chr6 31089065 31090605 + 0.696388786569421 NA Intergenic Intergenic -26742 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_73_47_0.338943260763042_5.75443413110268_0.696223193418884-2 chr12 104895946 104896663 + 0.696223193418884 NA Intergenic Intergenic -31228 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak1_73_47_0.338943260763042_5.75443413110268_0.696223193418884 chr10 127621299 127622215 + 0.696223193418884 NA promoter-TSS (NM_008512) promoter-TSS (NM_008512) -609 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_73_47_0.338943260763042_5.75443413110268_0.696223193418884-3 chr6 84179091 84179932 + 0.696223193418884 NA intron (NM_001077694, intron 40 of 54) intron (NM_001077694, intron 40 of 54) 160125 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak2_73_47_0.338943260763042_5.75443413110268_0.696223193418884 chr17 35126186 35126836 + 0.696223193418884 NA intron (NM_033477, intron 1 of 2) CpG 109 NM_033477 114585 Mm.42070 NM_033477 ENSMUSG00000043311 D17H6S53E G4|NG34 DNA segment, Chr 17, human D6S53E protein-coding common_peak1_56_61_-0.404197253614273_5.75209768357974_0.696223193418884 chr17 29458570 29459534 + 0.696223193418884 NA Intergenic Intergenic -31993 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_73_47_0.338943260763042_5.75443413110268_0.696223193418884-2 chr7 28417775 28418361 + 0.696223193418884 NA intron (NM_175021, intron 2 of 12) intron (NM_175021, intron 2 of 12) 18123 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_56_61_-0.404197253614273_5.75209768357974_0.696223193418884-2 chr7 3291614 3292575 + 0.696223193418884 NA promoter-TSS (NM_001093766) promoter-TSS (NM_001093766) -934 NM_001093766 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak1_163_157_-0.239876160149909_7.18384266810215_0.696187348117295 chr19 5609503 5610517 + 0.696187348117295 NA promoter-TSS (NM_001199249) promoter-TSS (NM_001199249) 84 NM_001199249 81601 Mm.228930 NM_178637 ENSMUSG00000024926 Kat5 AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60 K(lysine) acetyltransferase 5 protein-coding common_peak1_302_217_0.175094197134698_7.85573142334428_0.695717739337187 chr19 10137809 10139213 + 0.695717739337187 NA Intergenic Intergenic -37008 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_135_132_-0.259561537311226_6.92550166684558_0.695604022112676 chr1 16618440 16619266 + 0.695604022112676 NA intron (NM_001271016, intron 1 of 6) CpG 485 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_109_109_-0.289582391746966_6.63656851765118_0.695551052331828 chr11 83472668 83474025 + 0.695551052331828 NA intron (NM_027427, intron 1 of 15) CpG 238 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak2_33_39_-0.512097237550911_5.06587947611191_0.694972475810969-4 chr6 17546601 17547153 + 0.694972475810969 NA intron (NM_008591, intron 12 of 21) intron (NM_008591, intron 12 of 21) 82920 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_33_39_-0.512097237550911_5.06587947611191_0.694972475810969 chr12 75669865 75670377 + 0.694972475810969 NA promoter-TSS (NM_028203) promoter-TSS (NM_028203) -584 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak2_33_39_-0.512097237550911_5.06587947611191_0.694972475810969-2 chr19 44069205 44069707 + 0.694972475810969 NA 5' UTR (NM_145502, exon 1 of 11) 5' UTR (NM_145502, exon 1 of 11) 230 NM_145502 226144 Mm.279865 NM_145502 ENSMUSG00000025198 Erlin1 2810439N09Rik|C80197|Keo4|Spfh1 ER lipid raft associated 1 protein-coding common_peak2_33_39_-0.512097237550911_5.06587947611191_0.694972475810969 chr10 94688158 94688527 + 0.694972475810969 NA promoter-TSS (NM_029852) promoter-TSS (NM_029852) 271 NR_015524 67723 Mm.116284 NR_015524 Cep83os 4932415G12Rik|Ccdc41os1 centrosomal protein 83, opposite strand ncRNA common_peak1_33_39_-0.512097237550911_5.06587947611191_0.694972475810969-3 chr4 129542255 129542604 + 0.694972475810969 NA intron (NM_008228, intron 1 of 13) CpG 217 NM_008228 433759 Mm.202504 NM_008228 ENSMUSG00000028800 Hdac1 HD1|Hdac1-ps|MommeD5|RPD3 histone deacetylase 1 protein-coding common_peak1_33_39_-0.512097237550911_5.06587947611191_0.694972475810969-2 chr14 16242983 16243554 + 0.694972475810969 NA promoter-TSS (NM_001359883) promoter-TSS (NM_001359883) 63 NM_001359883 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak2_33_39_-0.512097237550911_5.06587947611191_0.694972475810969-3 chr2 126304785 126305360 + 0.694972475810969 NA Intergenic Intergenic 152931 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding unique_peak2_33_39_-0.512097237550911_5.06587947611191_0.694972475810969 chr6 112546572 112547338 + 0.694972475810969 NA Intergenic Intergenic -57130 NM_001081147 18430 Mm.333310 NM_001081147 ENSMUSG00000049112 Oxtr OTR oxytocin receptor protein-coding common_peak2_33_39_-0.512097237550911_5.06587947611191_0.694972475810969-5 chr9 27029555 27030030 + 0.694972475810969 NA promoter-TSS (NM_178113) promoter-TSS (NM_178113) 302 NM_178027 69091 Mm.218717 NM_178027 ENSMUSG00000031988 Vps26b 1810012I05Rik|2310075A12Rik|AI848392 VPS26 retromer complex component B protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-3 chr16 45951420 45951899 + 0.694972475810963 NA intron (NR_152227, intron 2 of 2) intron (NR_152227, intron 2 of 2) 6053 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA unique_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963 chr10 18407852 18408444 + 0.694972475810963 NA 5' UTR (NM_173390, exon 1 of 7) 5' UTR (NM_173390, exon 1 of 7) 473 NM_173390 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963 chr1 171378379 171378987 + 0.694972475810963 NA intron (NM_001122680, intron 1 of 7) intron (NM_001122680, intron 1 of 7) 8510 NM_001122680 71740 Mm.263414 NM_027893 ENSMUSG00000006411 Nectin4 1200017F15Rik|Prr4|Pvrl4 nectin cell adhesion molecule 4 protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-6 chr4 115088327 115088895 + 0.694972475810963 NA promoter-TSS (NM_001164558) promoter-TSS (NM_001164558) -97 NM_001164558 67182 Mm.30181 NM_026018 ENSMUSG00000028716 Pdzk1ip1 0610007F13Rik|2700030M23Rik|AU046042|Map17 PDZK1 interacting protein 1 protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-2 chr1 178758812 178759184 + 0.694972475810963 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 229873 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak2_46_28_0.415680308174482_5.06582114921481_0.694972475810963-4 chr7 29238410 29238877 + 0.694972475810963 NA intron (NM_001357664, intron 1 of 7) intron (NM_001357664, intron 1 of 7) 186 NM_001357664 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-4 chr17 84465431 84466178 + 0.694972475810963 NA intron (NM_183021, intron 1 of 37) CpG 404 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak2_46_28_0.415680308174482_5.06582114921481_0.694972475810963 chr13 34697559 34698120 + 0.694972475810963 NA Intergenic Intergenic -41803 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_46_28_0.415680308174482_5.06582114921481_0.694972475810963-3 chr2 103073730 103074268 + 0.694972475810963 NA promoter-TSS (NM_175094) promoter-TSS (NM_175094) 324 NM_019735 56369 Mm.24772 NM_019735 ENSMUSG00000010911 Apip APIP2|CGI-29|Mmrp19 APAF1 interacting protein protein-coding common_peak2_46_28_0.415680308174482_5.06582114921481_0.694972475810963-2 chr17 29450917 29451406 + 0.694972475810963 NA Intergenic Intergenic -39884 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-7 chr5 122354516 122354872 + 0.694972475810963 NA promoter-TSS (NM_144912) promoter-TSS (NM_144912) 366 NR_152872 56433 Mm.216528 NM_019780 ENSMUSG00000029462 Vps29 2010015D08Rik|AW049835|PEP11 VPS29 retromer complex component protein-coding unique_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-2 chr8 22758698 22759096 + 0.694972475810963 NA intron (NM_008872, intron 1 of 13) intron (NM_008872, intron 1 of 13) 1175 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding common_peak1_46_28_0.415680308174482_5.06582114921481_0.694972475810963-5 chr18 10325467 10326090 + 0.694972475810963 NA intron (NM_001083628, intron 1 of 32) CpG 599 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding common_peak2_226_160_0.198675431980228_7.43025459410473_0.694757678963264 chr3 119781768 119783336 + 0.694757678963264 NA intron (NM_001310711, intron 1 of 13) intron (NM_001310711, intron 1 of 13) 836 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-7 chr19 56458843 56459253 + 0.694543404804849 NA Intergenic Intergenic -2589 NM_001164263 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding unique_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-2 chr3 95313208 95313761 + 0.694543404804849 NA Intergenic Intergenic -1706 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-10 chr5 103375100 103375450 + 0.694543404804849 NA Intergenic Intergenic 28677 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA unique_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849 chr16 17619311 17620024 + 0.694543404804849 NA intron (NM_001164609, intron 1 of 19) CpG 313 NM_001164609 77626 Mm.34659 NM_029945 ENSMUSG00000005899 Smpd4 4122402O22Rik sphingomyelin phosphodiesterase 4 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849 chr1 151341652 151342003 + 0.694543404804849 NA Intergenic Intergenic -2659 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-9 chr5 92372285 92372760 + 0.694543404804849 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -9226 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-2 chr1 194879846 194880221 + 0.694543404804849 NA Intergenic Intergenic 58032 NR_039539 100628615 NR_039539 ENSMUSG00000092633 Mir3962 mmu-mir-3962|mu-mir-3962 microRNA 3962 ncRNA common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-6 chr17 31325755 31326074 + 0.694543404804849 NA intron (NM_001242427, intron 9 of 19) intron (NM_001242427, intron 9 of 19) 29690 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-2 chr17 10320000 10320268 + 0.694543404804849 NA promoter-TSS (NM_001159517) promoter-TSS (NM_001159517) 215 NR_037588 100526796 Mm.384135 NR_037588 Cahm B930003M22Rik colon adenocarcinoma hypermethylated RNA ncRNA common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-8 chr2 102948076 102948359 + 0.694543404804849 NA Intergenic Intergenic -46552 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-11 chr6 113531396 113531640 + 0.694543404804849 NA promoter-TSS (NM_001347350) promoter-TSS (NM_001347350) 120 NM_175101 66087 Mm.275989 NM_175101 ENSMUSG00000030286 Emc3 0610039A15Rik|AI225901|AW260416|Pob|Tmem111 ER membrane protein complex subunit 3 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-4 chr14 41421194 41421813 + 0.694543404804849 NA Intergenic Intergenic -151708 NM_001358037 100041722 Mm.425891 NM_001358037 ENSMUSG00000090440 1700049E17Rik2 - tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-12 chr8 120063122 120063427 + 0.694543404804849 NA Intergenic Intergenic 38198 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-3 chr10 43901088 43901629 + 0.694543404804849 NA promoter-TSS (NM_130892) promoter-TSS (NM_130892) 378 NM_001081054 76563 Mm.5904 NM_001081054 ENSMUSG00000019863 Qrsl1 2700038P16Rik|C80053|GatA glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 protein-coding unique_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-4 chr9 57626035 57626390 + 0.694543404804849 NA TTS (NM_007783) TTS (NM_007783) -5438 NM_199222 235416 Mm.295630 NM_199222 ENSMUSG00000056271 Lman1l BC020188|slamp lectin, mannose-binding 1 like protein-coding common_peak1_21_27_-0.621124539887299_4.49679265211395_0.694543404804849 chr15 95016862 95017362 + 0.694543404804849 NA intron (NM_178789, intron 6 of 7) intron (NM_178789, intron 6 of 7) 132206 NR_015482 100043315 Mm.159041 NR_015482 ENSMUSG00000100603 LOC100043315 - uncharacterized LOC100043315 ncRNA common_peak1_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-3 chr19 40478758 40479033 + 0.694543404804849 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -27497 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-13 chr9 62626758 62627161 + 0.694543404804849 NA Intergenic Intergenic -50896 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding unique_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-3 chr7 75574842 75575383 + 0.694543404804849 NA intron (NM_029332, intron 3 of 36) intron (NM_029332, intron 3 of 36) 119578 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak2_21_27_-0.621124539887299_4.49679265211395_0.694543404804849-5 chr17 23192727 23193078 + 0.694543404804849 NA intron (NM_001357697, intron 1 of 5) intron (NM_001357697, intron 1 of 5) 326 NM_009555 22700 Mm.437934 NM_009555 ENSMUSG00000002617 Zfp40 CTfin12|NTfin12|Zfp-40 zinc finger protein 40 protein-coding common_peak2_32_18_0.519138470954173_4.50749674892067_0.694543404804846-2 chr15 31341975 31342354 + 0.694543404804846 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 25595 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-14 chr7 4789388 4789794 + 0.694543404804846 NA promoter-TSS (NM_029384) promoter-TSS (NM_029384) -31 NM_029384 664968 Mm.292837 NM_029384 ENSMUSG00000030431 Tmem238 2210411K11Rik transmembrane protein 238 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-9 chr3 41289420 41289822 + 0.694543404804846 NA Intergenic Intergenic 203578 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-6 chr7 28382463 28382916 + 0.694543404804846 NA Intergenic Intergenic -3461 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-3 chr14 21548661 21549135 + 0.694543404804846 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 49113 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak2_32_18_0.519138470954173_4.50749674892067_0.694543404804846-4 chr16 91931233 91931535 + 0.694543404804846 NA intron (NM_138597, intron 1 of 6) CpG 246 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-11 chr4 134668378 134669117 + 0.694543404804846 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 35543 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846 chr11 49249027 49249705 + 0.694543404804846 NA intron (NM_001110149, intron 1 of 1) intron (NM_001110149, intron 1 of 1) -1186 NM_001110150 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-12 chr5 115568503 115568982 + 0.694543404804846 NA intron (NM_172719, intron 1 of 57) intron (NM_172719, intron 1 of 57) 3479 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak2_32_18_0.519138470954173_4.50749674892067_0.694543404804846 chr13 45680242 45680683 + 0.694543404804846 NA intron (NM_001199304, intron 5 of 6) GA-rich|Low_complexity|Low_complexity 173018 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-15 chr8 44938590 44938791 + 0.694543404804846 NA Intergenic CpG -11518 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_32_18_0.519138470954173_4.50749674892067_0.694543404804846-6 chr2 137048944 137049322 + 0.694543404804846 NA intron (NM_001355671, intron 5 of 6) intron (NM_001355671, intron 5 of 6) 67387 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846 chr1 54129152 54129703 + 0.694543404804846 NA intron (NM_001001883, intron 1 of 28) intron (NM_001001883, intron 1 of 28) 65607 NM_001001883 329152 Mm.132150 NM_172655 ENSMUSG00000042807 Hecw2 A730039N16Rik|D030049F17Rik|Gm971|Nedl2|mKIAA1301 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-5 chr16 43464610 43465113 + 0.694543404804846 NA intron (NM_181058, intron 3 of 6) intron (NM_181058, intron 3 of 6) -44665 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-2 chr11 8635179 8635532 + 0.694543404804846 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 29180 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-6 chr17 42938871 42939141 + 0.694543404804846 NA Intergenic Intergenic -62582 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-7 chr7 29768686 29769090 + 0.694543404804846 NA intron (NM_023750, intron 1 of 4) intron (NM_023750, intron 1 of 4) 336 NM_023750 74352 Mm.251083 NM_023750 ENSMUSG00000046185 Zfp84 2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69 zinc finger protein 84 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-10 chr3 67430252 67430575 + 0.694543404804846 NA intron (NM_138591, intron 1 of 17) CpG 298 NM_138591 28030 Mm.122466 NM_138591 ENSMUSG00000027774 Gfm1 AW545374|D3Wsu133e|Gfm G elongation factor, mitochondrial 1 protein-coding common_peak2_32_18_0.519138470954173_4.50749674892067_0.694543404804846-3 chr16 37814078 37814352 + 0.694543404804846 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 37160 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-13 chr6 4903502 4903925 + 0.694543404804846 NA intron (NM_181595, intron 1 of 15) CpG 393 NM_181595 243725 Mm.332901 NM_181595 ENSMUSG00000032827 Ppp1r9a 2810430P21Rik|4930518N04Rik|5330407E15|A230094E16Rik|BB181831|NRB|mKIAA1222|neurabin-I protein phosphatase 1, regulatory (inhibitor) subunit 9A protein-coding unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-4 chr2 144550365 144550788 + 0.694543404804846 NA intron (NM_015754, intron 1 of 4) intron (NM_015754, intron 1 of 4) 283 NM_015754 26450 Mm.440564 NM_015754 ENSMUSG00000027428 Rbbp9 Bog retinoblastoma binding protein 9, serine hydrolase protein-coding unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-3 chr16 24901241 24901812 + 0.694543404804846 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -158113 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-16 chr9 63758242 63758643 + 0.694543404804846 NA promoter-TSS (NM_016769) promoter-TSS (NM_016769) -448 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-4 chr16 16216558 16216831 + 0.694543404804846 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 3349 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-5 chr3 145729880 145730163 + 0.694543404804846 NA Intergenic Intergenic -28671 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-8 chr19 7302246 7302591 + 0.694543404804846 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -6971 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_32_18_0.519138470954173_4.50749674892067_0.694543404804846-5 chr19 4121177 4121410 + 0.694543404804846 NA intron (NM_016666, intron 2 of 6) CpG 282 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-7 chr19 6911117 6911616 + 0.694543404804846 NA TTS (NM_026306) TTS (NM_026306) -1260 NM_001358444 54683 Mm.279782 NM_012021 ENSMUSG00000024953 Prdx5 AOEB166|AOPP|PLP|Pmp20|Prdx6|PrxV peroxiredoxin 5 protein-coding unique_peak1_32_18_0.519138470954173_4.50749674892067_0.694543404804846-2 chr15 74659232 74659607 + 0.694543404804846 NA Intergenic Intergenic 13151 NM_001276684 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak2_164_158_-0.240270031279206_7.19274793964475_0.693484447080905 chr15 79686814 79688451 + 0.693484447080905 NA 5' UTR (NM_028792, exon 1 of 4) 5' UTR (NM_028792, exon 1 of 4) 240 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding common_peak1_165_158_-0.231614313966682_7.19707579830101_0.693484447080905 chr5 112278932 112281009 + 0.693484447080905 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 3279 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_55_34_0.395361097273714_5.32696356558182_0.69337412621609-4 chr3 95995837 95996388 + 0.69337412621609 NA promoter-TSS (NM_023320) promoter-TSS (NM_023320) -273 NM_023320 67220 Mm.458147 NM_023320 ENSMUSG00000015745 Plekho1 2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2 pleckstrin homology domain containing, family O member 1 protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-6 chr5 107288945 107289646 + 0.69337412621609 NA 5' UTR (NM_011578, exon 1 of 17) 5' UTR (NM_011578, exon 1 of 17) 334 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-8 chr8 41416719 41417074 + 0.69337412621609 NA intron (NM_013522, intron 1 of 8) CpG 222 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding common_peak2_55_34_0.395361097273714_5.32696356558182_0.69337412621609-3 chr3 52577170 52577979 + 0.69337412621609 NA Intergenic Intergenic 60610 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-4 chr19 25461463 25461973 + 0.69337412621609 NA Intergenic Intergenic -43988 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609 chr1 74277318 74278029 + 0.69337412621609 NA promoter-TSS (NM_174985) promoter-TSS (NM_174985) -927 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-5 chr3 144980846 144981669 + 0.69337412621609 NA Intergenic Intergenic -6212 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak2_55_34_0.395361097273714_5.32696356558182_0.69337412621609 chr12 31266996 31267612 + 0.69337412621609 NA intron (NM_008482, intron 2 of 32) intron (NM_008482, intron 2 of 32) 2010 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-9 chr9 63724597 63725187 + 0.69337412621609 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 33102 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-2 chr12 80366953 80367637 + 0.69337412621609 NA intron (NM_177267, intron 6 of 8) L1Md_F2|LINE|L1 24382 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak2_55_34_0.395361097273714_5.32696356558182_0.69337412621609-2 chr19 10690825 10691180 + 0.69337412621609 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) 2267 NM_001361959 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-3 chr15 101371050 101371774 + 0.69337412621609 NA Intergenic Intergenic -1287 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak1_55_34_0.395361097273714_5.32696356558182_0.69337412621609-7 chr8 23037946 23038395 + 0.69337412621609 NA intron (NM_001277284, intron 1 of 42) intron (NM_001277284, intron 1 of 42) 3071 NM_001277284 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding common_peak2_40_46_-0.476574304503956_5.31630169942566_0.693374126216084 chr10 95388935 95389742 + 0.693374126216084 NA Intergenic Intergenic 25945 NM_001168657 216233 Mm.474283 NM_007706 ENSMUSG00000020027 Socs2 8030460M17|AI527257|AW108012|CIS2|Cish2|D130043N08Rik|JAB|SOCS-2|SSI-2|hg suppressor of cytokine signaling 2 protein-coding common_peak1_40_46_-0.476574304503956_5.31630169942566_0.693374126216084 chr7 105739327 105740102 + 0.693374126216084 NA intron (NM_001161724, intron 2 of 12) intron (NM_001161724, intron 2 of 12) -2329 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak2_40_46_-0.476574304503956_5.31630169942566_0.693374126216084-2 chr8 123373127 123373604 + 0.693374126216084 NA promoter-TSS (NM_001037877) promoter-TSS (NM_001037877) -346 NM_001359076 66855 Mm.178818 NM_025804 ENSMUSG00000001472 Tcf25 1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding common_peak1_76_79_-0.341093642716173_6.15138127352928_0.693339305075799-2 chr11 103266741 103267400 + 0.693339305075799 NA intron (NM_016896, intron 1 of 15) CpG 331 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_76_79_-0.341093642716173_6.15138127352928_0.693339305075799 chr11 8634242 8634842 + 0.693339305075799 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 29993 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_76_79_-0.341093642716173_6.15138127352928_0.693339305075799-2 chr17 74528491 74529093 + 0.693339305075799 NA exon (NM_007566, exon 1 of 73) exon (NM_007566, exon 1 of 73) 497 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak1_96_63_0.311610554411078_6.15580527720554_0.693339305075799 chr15 3904435 3905439 + 0.693339305075799 NA Intergenic Intergenic 74636 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak2_76_79_-0.341093642716173_6.15138127352928_0.693339305075799-3 chr5 96161677 96163357 + 0.693339305075799 NA promoter-TSS (NM_178854) promoter-TSS (NM_178854) -527 NM_144910 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak2_95_63_0.296765687298763_6.14838284364938_0.693339305075799 chr4 150855149 150856079 + 0.693339305075799 NA promoter-TSS (NR_040649) promoter-TSS (NR_040649) 544 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak2_96_63_0.311610554411078_6.15580527720554_0.693339305075799-2 chr18 77947988 77948707 + 0.693339305075799 NA exon (NM_001195633, exon 2 of 44) exon (NM_001195633, exon 2 of 44) 9880 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_96_63_0.311610554411078_6.15580527720554_0.693339305075799 chr11 103263972 103265259 + 0.693339305075799 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 2786 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_76_79_-0.341093642716173_6.15138127352928_0.693339305075799-3 chr5 110176646 110177559 + 0.693339305075799 NA promoter-TSS (NR_040430) promoter-TSS (NR_040430) 245 NM_008146 269682 Mm.9392 NM_008146 ENSMUSG00000029502 Golga3 5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|Mea2/Golga3|repro27 golgi autoantigen, golgin subfamily a, 3 protein-coding common_peak2_96_63_0.311610554411078_6.15580527720554_0.693339305075799-3 chr5 139930645 139931268 + 0.693339305075799 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 23013 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_76_79_-0.341093642716173_6.15138127352928_0.693339305075799 chr10 39732127 39733100 + 0.693339305075799 NA promoter-TSS (NR_038037) promoter-TSS (NR_038037) 453 NM_011264 19714 Mm.439723 NM_011264 ENSMUSG00000019841 Rev3l Rev|Rev3|Sez4 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding common_peak2_85_55_0.331832628578585_5.9732712363469_0.692838550835943 chr16 5050045 5050828 + 0.692838550835943 NA promoter-TSS (NM_001079814) promoter-TSS (NM_001079814) 379 NM_001356320 170644 Mm.66356 NM_026666 ENSMUSG00000039473 Ubn1 1110029L11Rik|2610108L02Rik|AA673476|AW124741 ubinuclein 1 protein-coding common_peak1_84_55_0.315077854459482_5.96489384928734_0.692838550835943 chr4 6453064 6454334 + 0.692838550835943 NA intron (NM_010945, intron 1 of 30) CpG 572 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_84_55_0.315077854459482_5.96489384928734_0.692838550835943-2 chr9 110686347 110687448 + 0.692838550835943 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 30394 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_66_70_-0.368194101864295_5.96565006857253_0.692838550835943-2 chr7 16207878 16208821 + 0.692838550835943 NA intron (NM_027883, intron 7 of 16) (CA)n|Simple_repeat|Simple_repeat 13644 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_85_55_0.331832628578585_5.9732712363469_0.692838550835943-3 chr3 96244550 96245333 + 0.692838550835943 NA promoter-TSS (NM_013549) promoter-TSS (NM_013549) -516 NM_178212 319192 Mm.5220 NM_178212 ENSMUSG00000063954 Hist2h2aa2 H2a-614|H2a-615 histone cluster 2, H2aa2 protein-coding common_peak2_84_55_0.315077854459482_5.96489384928734_0.692838550835943 chr10 7662846 7663951 + 0.692838550835943 NA promoter-TSS (NR_030698) promoter-TSS (NR_030698) 27 NR_030698 320642 Mm.398806 NR_030698 A630066F11Rik - RIKEN cDNA A630066F11 gene ncRNA common_peak2_66_70_-0.368194101864295_5.96565006857253_0.692838550835943 chr19 7417776 7418551 + 0.692838550835943 NA intron (NM_175381, intron 1 of 4) CpG 538 NM_175381 108899 Mm.386838 NM_175381 ENSMUSG00000053080 2700081O15Rik AI255177|AI848741|AW742297 RIKEN cDNA 2700081O15 gene protein-coding common_peak1_85_55_0.331832628578585_5.9732712363469_0.692838550835943-2 chr2 167585961 167586907 + 0.692838550835943 NA Intergenic Intergenic 45571 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_85_55_0.331832628578585_5.9732712363469_0.692838550835943 chr11 86957545 86958663 + 0.692838550835943 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 35658 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak2_98_99_-0.303009582722756_6.49235139841335_0.692549090913576 chr8 128488641 128489572 + 0.692549090913576 NA intron (NM_001358959, intron 12 of 16) intron (NM_001358959, intron 12 of 16) 129865 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_181_172_-0.22154096275397_7.32385774625974_0.692262292320123 chr5 93130542 93132517 + 0.692262292320123 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 38113 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_284_204_0.176065896874547_7.76751304794272_0.691765433628233 chr15 79108198 79109965 + 0.691765433628233 NA promoter-TSS (NM_177461) promoter-TSS (NM_177461) 98 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding common_peak2_246_175_0.19112000699868_7.55499162213664_0.6917447341402 chr15 102102175 102104167 + 0.6917447341402 NA intron (NM_001355636, intron 1 of 28) intron (NM_001355636, intron 1 of 28) 237 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_110_110_-0.289674502638453_6.64957861503088_0.691613651230254 chr8 23207287 23208291 + 0.691613651230254 NA intron (NM_018743, intron 1 of 12) intron (NM_018743, intron 1 of 12) 664 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding common_peak1_134_91_0.261586814023781_6.6543553630689_0.691613651230254 chr9 102782697 102784464 + 0.691613651230254 NA Intergenic Intergenic 43932 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_110_110_-0.289674502638453_6.64957861503088_0.691613651230254 chr19 53943497 53944405 + 0.691613651230254 NA promoter-TSS (NM_001355242) promoter-TSS (NM_001355242) -355 NM_001168505 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak2_108_72_0.288870326248428_6.33425972200423_0.691543590885677 chr8 121477469 121478574 + 0.691543590885677 NA Intergenic Intergenic 63933 NM_001357260 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding common_peak1_108_72_0.288870326248428_6.33425972200423_0.691543590885677 chr13 45001170 45002012 + 0.691543590885677 NA intron (NM_025772, intron 1 of 9) intron (NM_025772, intron 1 of 9) 505 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak2_87_89_-0.319732673305859_6.33198675967675_0.691543590885677 chr13 95324912 95325866 + 0.691543590885677 NA intron (NM_028106, intron 1 of 1) CpG 564 NM_028106 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding common_peak1_108_72_0.288870326248428_6.33425972200423_0.691543590885677-2 chr14 64439971 64441445 + 0.691543590885677 NA intron (NM_001253715, intron 1 of 4) CpG 318 NM_001253715 110265 Mm.26713 NM_026322 ENSMUSG00000054733 Msra 2310045J23Rik|6530413P12Rik|MSR-A methionine sulfoxide reductase A protein-coding common_peak2_39_23_0.457679462677274_4.81380223205979_0.690880484874617-5 chr7 144055461 144055826 + 0.690880484874617 NA Intergenic Intergenic 46389 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-4 chr3 36552757 36553207 + 0.690880484874617 NA intron (NM_019393, intron 1 of 11) intron (NM_019393, intron 1 of 11) 376 NM_019393 50911 Mm.116711 NM_019393 ENSMUSG00000027714 Exosc9 PM/Scl-75|Pmscl1|RRP45|p5|p6 exosome component 9 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-6 chr5 32713609 32713995 + 0.690880484874617 NA Intergenic CpG 32540 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding unique_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-4 chr3 98381339 98381613 + 0.690880484874617 NA Intergenic Intergenic -1005 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-6 chr9 63699028 63699647 + 0.690880484874617 NA intron (NM_016769, intron 1 of 8) MIRb|SINE|MIR 58657 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_27_33_-0.555763747458414_4.80958096752113_0.690880484874617 chr13 34726532 34726971 + 0.690880484874617 NA Intergenic Intergenic -12891 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-3 chr10 75667617 75668091 + 0.690880484874617 NA intron (NM_172549, intron 29 of 36) CpG -23846 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding common_peak2_39_23_0.457679462677274_4.81380223205979_0.690880484874617-6 chr8 25784847 25785120 + 0.690880484874617 NA promoter-TSS (NM_026032) promoter-TSS (NM_026032) 226 NM_026121 67384 Mm.118400 NM_026121 ENSMUSG00000037316 Bag4 2410112I15Rik|SODD BCL2-associated athanogene 4 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-8 chr7 144553226 144553654 + 0.690880484874617 NA intron (NM_001195086, intron 1 of 31) CpG 289 NM_001033319 233977 Mm.490347 NM_001033319 ENSMUSG00000037519 Ppfia1 C030014K08Rik|C87158|LIP.1|LIP1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 protein-coding common_peak2_39_23_0.457679462677274_4.81380223205979_0.690880484874617-3 chr15 53129052 53129281 + 0.690880484874617 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 217017 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-7 chr5 125433738 125434114 + 0.690880484874617 NA intron (NM_203319, intron 1 of 26) CpG 122 NM_203319 208144 Mm.296385 NM_203319 ENSMUSG00000029480 Dhx37 Gm1050|Gm451|mKIAA1517 DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-4 chr13 108603868 108604466 + 0.690880484874617 NA Intergenic Intergenic -50010 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-2 chr10 67754706 67755495 + 0.690880484874617 NA Intergenic Intergenic 157562 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-7 chr7 16618066 16618553 + 0.690880484874617 NA intron (NR_136929, intron 1 of 2) intron (NR_136929, intron 1 of 2) -3316 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-9 chr8 22135026 22135624 + 0.690880484874617 NA intron (NM_011848, intron 11 of 15) intron (NM_011848, intron 11 of 15) -10258 NM_001347318 330721 Mm.113940 NM_177898 ENSMUSG00000037738 Nek5 6530411J22|BB049667 NIMA (never in mitosis gene a)-related expressed kinase 5 protein-coding unique_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-2 chr14 55885347 55885932 + 0.690880484874617 NA intron (NM_027143, intron 1 of 7) intron (NM_027143, intron 1 of 7) 697 NR_138134 219094 Mm.37592 NM_027143 ENSMUSG00000047153 Khnyn 6330555F21|9130227C08Rik|AI605259|Kiaa0323|mKIAA0323 KH and NYN domain containing protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-6 chr6 88967900 88968559 + 0.690880484874617 NA Intergenic ID_B1|SINE|B4 65978 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-3 chr17 45873864 45874427 + 0.690880484874617 NA Intergenic Intergenic 7307 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA common_peak2_39_23_0.457679462677274_4.81380223205979_0.690880484874617-4 chr19 10881223 10881707 + 0.690880484874617 NA intron (NM_134142, intron 1 of 3) intron (NM_134142, intron 1 of 3) 278 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-8 chr8 113804534 113805023 + 0.690880484874617 NA intron (NM_172466, intron 3 of 22) intron (NM_172466, intron 3 of 22) 44061 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617 chr7 74065815 74066170 + 0.690880484874617 NA Intergenic Intergenic -52310 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-5 chr5 24383771 24384281 + 0.690880484874617 NA TTS (NM_001002897) TTS (NM_001002897) 8117 NM_001002897 213948 Mm.332252 NM_001002897 ENSMUSG00000038295 Atg9b Apg912|Apg9l2|Apgdc2|Gm574|Nos3as|eONE|sONE autophagy related 9B protein-coding unique_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617 chr11 88165449 88166007 + 0.690880484874617 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -3837 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617 chr1 180255654 180256171 + 0.690880484874617 NA intron (NM_001128605, intron 1 of 10) CpG 388 NM_001128605 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding common_peak2_39_23_0.457679462677274_4.81380223205979_0.690880484874617-2 chr11 115954306 115954705 + 0.690880484874617 NA intron (NM_020483, intron 4 of 10) intron (NM_020483, intron 4 of 10) -20220 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak2_39_23_0.457679462677274_4.81380223205979_0.690880484874617 chr1 183221048 183221443 + 0.690880484874617 NA intron (NM_001278219, intron 1 of 8) CpG 284 NM_026866 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-2 chr12 111945354 111945796 + 0.690880484874617 NA Intergenic Intergenic -1093 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-3 chr16 44347349 44348092 + 0.690880484874617 NA intron (NM_144550, intron 1 of 17) CpG 319 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak1_39_23_0.457679462677274_4.81380223205979_0.690880484874617-5 chr3 83862392 83862998 + 0.690880484874617 NA Intergenic PB1D7|SINE|Alu -21087 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617 chr1 54844169 54844869 + 0.690880484874617 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 81868 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-2 chr17 15010478 15010844 + 0.690880484874617 NA promoter-TSS (NM_001123367).2 promoter-TSS (NM_001123367).2 -477 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak1_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-3 chr18 68057375 68057828 + 0.690880484874617 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 124428 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-4 chr2 60800530 60800909 + 0.690880484874617 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) -78116 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_27_33_-0.555763747458414_4.80958096752113_0.690880484874617-5 chr7 113368916 113369287 + 0.690880484874617 NA intron (NM_133700, intron 1 of 10) CpG 238 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak2_151_146_-0.244618849437706_7.07736292011751_0.690718406657231 chr5 142820361 142821661 + 0.690718406657231 NA Intergenic CpG -3624 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-16 chr9 44493347 44493704 + 0.690311289528838 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) -5611 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-13 chr7 43482285 43482521 + 0.690311289528838 NA intron (NM_001164518, intron 1 of 7) intron (NM_001164518, intron 1 of 7) 7620 NM_001164518 210094 Mm.228087 NM_001164518 ENSMUSG00000013367 Iglon5 A230106M20Rik|Gm1431 IgLON family member 5 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-2 chr1 152820203 152820542 + 0.690311289528838 NA intron (NM_010877, intron 4 of 15) intron (NM_010877, intron 4 of 15) 20219 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-8 chr7 79742716 79743019 + 0.690311289528838 NA promoter-TSS (NM_001037927) promoter-TSS (NM_001037927) 264 NR_153403 18631 Mm.20615 NM_011068 ENSMUSG00000030545 Pex11a PEX11alpha peroxisomal biogenesis factor 11 alpha protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-13 chr2 52623197 52623528 + 0.690311289528838 NA intron (NM_001037099, intron 2 of 13) intron (NM_001037099, intron 2 of 13) 52497 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-3 chr10 60278665 60279186 + 0.690311289528838 NA intron (NM_011179, intron 1 of 14) intron (NM_011179, intron 1 of 14) 1297 NM_001146121 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838 chr1 156473819 156474129 + 0.690311289528838 NA intron (NM_009230, intron 1 of 15) intron (NM_009230, intron 1 of 15) 354 NM_009230 20652 Mm.28099 NM_009230 ENSMUSG00000026600 Soat1 8430426K15Rik|ACAT-1|AW550831|Acact|ald|hid sterol O-acyltransferase 1 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-2 chr10 53597035 53597298 + 0.690311289528838 NA 5' UTR (NM_025541, exon 1 of 4) 5' UTR (NM_025541, exon 1 of 4) 205 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-12 chr7 34930246 34930563 + 0.690311289528838 NA intron (NM_008820, intron 3 of 14) intron (NM_008820, intron 3 of 14) 17997 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-4 chr4 106628448 106628914 + 0.690311289528838 NA intron (NM_177667, intron 1 of 6) intron (NM_177667, intron 1 of 6) 6232 NM_177667 230576 Mm.41945 NM_177667 ENSMUSG00000034919 Ttc22 4732467L16Rik tetratricopeptide repeat domain 22 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-14 chr4 16168764 16169234 + 0.690311289528838 NA intron (NR_045765, intron 1 of 6) intron (NR_045765, intron 1 of 6) 4889 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA common_peak1_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-3 chr2 117909907 117910149 + 0.690311289528838 NA TTS (NR_040631) TTS (NR_040631) 88100 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-3 chr11 32454477 32454777 + 0.690311289528838 NA promoter-TSS (NM_001361561) promoter-TSS (NM_001361561) -743 NM_001361561 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-15 chr5 31562467 31562931 + 0.690311289528838 NA Intergenic Intergenic 8698 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-9 chr4 44204761 44205102 + 0.690311289528838 NA Intergenic Intergenic 16336 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-9 chr14 73552897 73553148 + 0.690311289528838 NA intron (NM_001361638, intron 1 of 9) CpG 236 NM_001361638 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS|SCS-betaA succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-5 chr12 70453239 70453515 + 0.690311289528838 NA intron (NM_028339, intron 1 of 7) intron (NM_028339, intron 1 of 7) 223 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838 chr1 150042698 150043079 + 0.690311289528838 NA Intergenic MIR|SINE|MIR 56986 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-9 chr7 112456729 112457197 + 0.690311289528838 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 29257 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-10 chr16 45965033 45965349 + 0.690311289528838 NA intron (NM_001134480, intron 3 of 3) intron (NM_001134480, intron 3 of 3) 19585 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-7 chr13 75789915 75790115 + 0.690311289528838 NA Intergenic Intergenic -49870 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-6 chr12 8808940 8809143 + 0.690311289528838 NA Intergenic Intergenic 37645 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-6 chr6 91653101 91653452 + 0.690311289528838 NA Intergenic Intergenic -30791 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-14 chr7 118930213 118930646 + 0.690311289528838 NA intron (NM_001081446, intron 7 of 8) intron (NM_001081446, intron 7 of 8) 64782 NM_022420 64297 Mm.103439 NM_022420 ENSMUSG00000008734 Gprc5b AW125761|Raig2 G protein-coupled receptor, family C, group 5, member B protein-coding common_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-2 chr14 20834476 20834766 + 0.690311289528838 NA Intergenic Intergenic -2041 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-11 chr5 143817881 143818251 + 0.690311289528838 NA Intergenic CpG -53796 NM_013557 15467 Mm.389709 NM_013557 ENSMUSG00000029613 Eif2ak1 HCR|Hri eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-8 chr2 77266000 77266468 + 0.690311289528838 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 14358 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-15 chr9 69431284 69431598 + 0.690311289528838 NA intron (NM_145618, intron 15 of 15) intron (NM_145618, intron 15 of 15) -22242 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-15 chr8 128558798 128559170 + 0.690311289528838 NA Intergenic G-rich|Low_complexity|Low_complexity -126670 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-4 chr11 57800600 57801053 + 0.690311289528838 NA promoter-TSS (NM_001081168) promoter-TSS (NM_001081168) 641 NR_131042 76516 Mm.28485 NR_131042 ENSMUSG00000087165 2010001A14Rik - RIKEN cDNA 2010001A14 gene ncRNA common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-7 chr13 40732662 40733130 + 0.690311289528838 NA intron (NM_001301674, intron 2 of 7) intron (NM_001301674, intron 2 of 7) 927 NM_011547 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-13 chr7 34939610 34939924 + 0.690311289528838 NA intron (NM_008820, intron 4 of 14) intron (NM_008820, intron 4 of 14) 27360 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-14 chr9 45846653 45846904 + 0.690311289528838 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 8233 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-16 chr7 83430987 83431455 + 0.690311289528838 NA Intergenic Intergenic -153710 NM_177695 233424 Mm.486619 NM_177695 ENSMUSG00000038540 Tmc3 9030203A06 transmembrane channel-like gene family 3 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-4 chr11 45944509 45944925 + 0.690311289528838 NA TTS (NM_001290737) TTS (NM_001290737) 218 NM_028185 72290 Mm.249827 NM_028185 ENSMUSG00000044847 Lsm11 2210404M20Rik|AV079530 U7 snRNP-specific Sm-like protein LSM11 protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-7 chr6 100709022 100709281 + 0.690311289528838 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 4417 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak1_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-2 chr12 72490484 72490844 + 0.690311289528838 NA intron (NM_030070, intron 23 of 24) intron (NM_030070, intron 23 of 24) -45693 NM_026327 67708 Mm.11233 NM_026327 ENSMUSG00000034501 Pcnx4 1810048J11Rik|4932413O10|AU017192|Pcnxl4 pecanex homolog 4 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-2 chr11 20895873 20896158 + 0.690311289528838 NA Intergenic Intergenic -64907 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-5 chr7 100121754 100122008 + 0.690311289528838 NA promoter-TSS (NM_133692) promoter-TSS (NM_133692) -381 NM_133692 67967 Mm.37562 NM_133692 ENSMUSG00000030726 Pold3 2410142G14Rik|C85233|P66|P68 polymerase (DNA-directed), delta 3, accessory subunit protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-17 chr8 57799642 57800005 + 0.690311289528838 NA intron (NM_175032, intron 10 of 11) intron (NM_175032, intron 10 of 11) -146768 NM_144731 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding common_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838 chr11 97441747 97442013 + 0.690311289528838 NA Intergenic Intergenic -8280 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-6 chr13 37895560 37895846 + 0.690311289528838 NA intron (NR_033218, intron 4 of 11) intron (NR_033218, intron 4 of 11) 6832 NM_001177869 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838 chr1 106172806 106173160 + 0.690311289528838 NA exon (NM_133821, exon 1 of 17) exon (NM_133821, exon 1 of 17) 1114 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-4 chr11 49247306 49247513 + 0.690311289528838 NA promoter-TSS (NM_001110149) promoter-TSS (NM_001110149) -68 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-8 chr13 109241765 109242163 + 0.690311289528838 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -82780 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-9 chr14 121797310 121797685 + 0.690311289528838 NA exon (NM_134074, exon 1 of 53) exon (NM_134074, exon 1 of 53) 237 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-5 chr3 122618431 122618712 + 0.690311289528838 NA intron (NM_001114665, intron 1 of 15) CpG 1143 NM_153118 214459 Mm.209491 NM_153118 ENSMUSG00000039735 Fnbp1l 2610318I01Rik|AW548221|TOCA1|toca-1 formin binding protein 1-like protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-11 chr3 37356870 37357160 + 0.690311289528838 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 8362 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-3 chr2 155849754 155850046 + 0.690311289528838 NA intron (NM_001355443, intron 9 of 9) intron (NM_001355443, intron 9 of 9) -15046 NM_027788 71405 Mm.260918 NM_027788 ENSMUSG00000074647 Fam83c 5530400B04Rik family with sequence similarity 83, member C protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-12 chr6 34317082 34317410 + 0.690311289528838 NA intron (NR_037965, intron 1 of 9) CpG 197 NR_037965 626009 Mm.451 NR_028277 Gm6644 Akr1b3p|EG626009 Akr1b3 pseudogene pseudo unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-4 chr2 68982371 68982643 + 0.690311289528838 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 121066 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-6 chr16 30063507 30063966 + 0.690311289528838 NA Intergenic CpG -1621 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-2 chr11 117308552 117308967 + 0.690311289528838 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -22956 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-11 chr18 14990566 14990965 + 0.690311289528838 NA intron (NR_045372, intron 3 of 4) intron (NR_045372, intron 3 of 4) 1770 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA common_peak1_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-4 chr4 117127217 117127458 + 0.690311289528838 NA 5' UTR (NM_175030, exon 3 of 4) 5' UTR (NM_175030, exon 3 of 4) 524 NM_175030 242646 Mm.358914 NM_175030 ENSMUSG00000047671 Tctex1d4 4833401D15Rik Tctex1 domain containing 4 protein-coding common_peak1_16_22_-0.706676119147317_4.17022389648335_0.690311289528838 chr11 98709214 98709558 + 0.690311289528838 NA intron (NM_001361995, intron 19 of 25) intron (NM_001361995, intron 19 of 25) 8073 NM_009971 12985 Mm.1238 NM_009971 ENSMUSG00000038067 Csf3 Csfg|G-CSF|MGI-IG colony stimulating factor 3 (granulocyte) protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-8 chr13 77708851 77709170 + 0.690311289528838 NA intron (NM_001163420, intron 1 of 8) intron (NM_001163420, intron 1 of 8) 320 NM_001163419 68675 Mm.343005 NM_138312 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-5 chr11 48818726 48819065 + 0.690311289528838 NA Intergenic Intergenic -1504 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-10 chr19 16998296 16998508 + 0.690311289528838 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 42284 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-5 chr5 143056891 143057541 + 0.690311289528838 NA intron (NM_001359851, intron 12 of 15) B3A|SINE|B2 55804 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak2_26_14_0.572711234864884_4.19324621304096_0.690311289528838-5 chr11 70192032 70192310 + 0.690311289528838 NA Intergenic B1_Mur1|SINE|Alu -21739 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding unique_peak2_16_22_-0.706676119147317_4.17022389648335_0.690311289528838-3 chr12 85472248 85472733 + 0.690311289528838 NA Intergenic Intergenic -1400 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-7 chr2 37795569 37795973 + 0.690311289528838 NA intron (NM_001163566, intron 12 of 12) intron (NM_001163566, intron 12 of 12) 19522 NM_001163566 241324 Mm.392369 NM_001163566 ENSMUSG00000035403 Crb2 5930402A21|BC043114 crumbs family member 2 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838 chr10 7019664 7020112 + 0.690311289528838 NA intron (NM_001039652, intron 5 of 5) intron (NM_001039652, intron 5 of 5) 3297 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-3 chr11 5065077 5065349 + 0.690311289528838 NA intron (NM_030228, intron 1 of 6) CpG 114 NM_144560 78926 Mm.44591 NM_030228 ENSMUSG00000034201 Gas2l1 4930500E24Rik|D0Jmb1|Gar22|TU-71.1 growth arrest-specific 2 like 1 protein-coding common_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-12 chr2 37702748 37703011 + 0.690311289528838 NA Intergenic CpG -14595 NR_039590 100628597 NR_039590 ENSMUSG00000092958 Mir5128 mir-5128|mmu-mir-5128|mu-mir-5128 microRNA 5128 ncRNA unique_peak1_26_14_0.572711234864884_4.19324621304096_0.690311289528838-10 chr5 92683372 92683834 + 0.690311289528838 NA 5' UTR (NM_015756, exon 1 of 11) 5' UTR (NM_015756, exon 1 of 11) 168 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_149_102_0.2495789576233_6.81129000599487_0.689309779578128 chr19 37959875 37961000 + 0.689309779578128 NA intron (NM_001302140, intron 20 of 53) intron (NM_001302140, intron 20 of 53) 83140 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_149_102_0.2495789576233_6.81129000599487_0.689309779578128 chr9 64252301 64253613 + 0.689309779578128 NA intron (NM_008927, intron 1 of 10) intron (NM_008927, intron 1 of 10) 648 NM_008927 26395 Mm.248907 NM_008927 ENSMUSG00000004936 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen-activated protein kinase kinase 1 protein-coding common_peak2_124_122_-0.267613724006297_6.80870764333609_0.689309779578103 chr13 9763666 9764829 + 0.689309779578103 NA promoter-TSS (NM_001347476) promoter-TSS (NM_001347476) 223 NM_001347470 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak1_307_221_0.172308626674597_7.88057017968741_0.689005348107829 chr15 38456098 38458830 + 0.689005348107829 NA Intergenic Intergenic 33083 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_74_48_0.328424620264554_5.77892215424749_0.68899829421709-3 chr3 52342939 52343984 + 0.68899829421709 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 75124 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_74_48_0.328424620264554_5.77892215424749_0.68899829421709-2 chr15 97772244 97773068 + 0.68899829421709 NA Intergenic Intergenic -4990 NM_001357630 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_74_48_0.328424620264554_5.77892215424749_0.68899829421709 chr3 21937340 21938090 + 0.68899829421709 NA Intergenic Intergenic -138937 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_74_48_0.328424620264554_5.77892215424749_0.68899829421709 chr12 83921126 83921808 + 0.68899829421709 NA intron (NR_073564, intron 1 of 12) CpG 467 NR_073563 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb NUMB endocytic adaptor protein protein-coding common_peak1_75_48_0.347398630856694_5.78840915954355_0.68899829421709 chr17 43016609 43017618 + 0.68899829421709 NA intron (NM_178589, intron 1 of 5) CpG 558 NM_178589 94185 Mm.200792 NM_178589 ENSMUSG00000023915 Tnfrsf21 AA959878|DR6|R74815|TR7 tumor necrosis factor receptor superfamily, member 21 protein-coding common_peak2_75_48_0.347398630856694_5.78840915954355_0.68899829421709 chr11 76398214 76399060 + 0.68899829421709 NA intron (NM_008750, intron 1 of 7) CpG 504 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak2_75_48_0.347398630856694_5.78840915954355_0.68899829421709-2 chr19 28622139 28622569 + 0.68899829421709 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -55870 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_57_62_-0.40236690212265_5.77609647243859_0.688998294217078-3 chr18 35829730 35830250 + 0.688998294217078 NA promoter-TSS (NM_001357458) promoter-TSS (NM_001357458) 202 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_58_62_-0.377878838177237_5.7883405044113_0.688998294217078-2 chr8 3278853 3279528 + 0.688998294217078 NA 5' UTR (NM_010568, exon 1 of 21) 5' UTR (NM_010568, exon 1 of 21) 427 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding common_peak2_57_62_-0.40236690212265_5.77609647243859_0.688998294217078 chr11 4296972 4297837 + 0.688998294217078 NA Intergenic Intergenic 30608 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_57_62_-0.40236690212265_5.77609647243859_0.688998294217078-2 chr11 78396529 78397508 + 0.688998294217078 NA TTS (NM_022411) TTS (NM_022411) 2533 NR_003282 790911 Mm.457257 NR_003282 ENSMUSG00000085747 Slc13a2os Gm11194 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand ncRNA common_peak2_58_62_-0.377878838177237_5.7883405044113_0.688998294217078 chr5 105698986 105699695 + 0.688998294217078 NA promoter-TSS (NM_001122768) promoter-TSS (NM_001122768) -629 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_57_62_-0.40236690212265_5.77609647243859_0.688998294217078-2 chr8 18783182 18783492 + 0.688998294217078 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -41775 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak2_57_62_-0.40236690212265_5.77609647243859_0.688998294217078-4 chr6 146642609 146643119 + 0.688998294217078 NA intron (NM_025315, intron 1 of 3) CpG 285 NM_025315 108098 Mm.26212 NM_025315 ENSMUSG00000030291 Med21 0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7 mediator complex subunit 21 protein-coding common_peak1_57_62_-0.40236690212265_5.77609647243859_0.688998294217078 chr1 106713497 106714218 + 0.688998294217078 NA 5' UTR (NM_177410, exon 1 of 1) 5' UTR (NM_177410, exon 1 of 1) 433 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_49_54_-0.419060851372351_5.57182928783848_0.688538237251116 chr12 76369076 76369438 + 0.688538237251116 NA intron (NM_028356, intron 1 of 2) CpG 207 NM_001172104 109929 Mm.41880 NM_028356 ENSMUSG00000056459 Zbtb25 2810462M08Rik|2900064P18Rik|AI842128|Kup|Zfp-50|Zfp50 zinc finger and BTB domain containing 25 protein-coding common_peak1_49_54_-0.419060851372351_5.57182928783848_0.688538237251116-2 chr19 7494422 7494823 + 0.688538237251116 NA exon (NM_146091, exon 1 of 13) exon (NM_146091, exon 1 of 13) 184 NM_146091 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding common_peak2_65_41_0.367693582045754_5.57616421380164_0.688538237251116 chr11 74649578 74650088 + 0.688538237251116 NA intron (NM_001081158, intron 1 of 25) CpG 338 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak1_65_41_0.367693582045754_5.57616421380164_0.688538237251116-4 chr5 139826236 139827144 + 0.688538237251116 NA intron (NM_001356963, intron 1 of 2) CpG 204 NM_001356963 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak1_65_41_0.367693582045754_5.57616421380164_0.688538237251116-3 chr17 73985100 73985731 + 0.688538237251116 NA Intergenic Intergenic -35219 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_65_41_0.367693582045754_5.57616421380164_0.688538237251116 chr11 94991967 94993208 + 0.688538237251116 NA exon (NM_172261, exon 1 of 10) exon (NM_172261, exon 1 of 10) 1375 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_49_54_-0.419060851372351_5.57182928783848_0.688538237251116 chr14 54617564 54617918 + 0.688538237251116 NA promoter-TSS (NR_030457) promoter-TSS (NR_030457) 254 NM_011186 19173 Mm.8911 NM_011186 ENSMUSG00000022193 Psmb5 - proteasome (prosome, macropain) subunit, beta type 5 protein-coding common_peak1_49_54_-0.419060851372351_5.57182928783848_0.688538237251116-3 chr19 42051540 42051994 + 0.688538237251116 NA promoter-TSS (NM_025752) promoter-TSS (NM_025752) -461 NM_025752 66765 Mm.440412 NM_025752 ENSMUSG00000090369 4933411K16Rik - RIKEN cDNA 4933411K16 gene protein-coding common_peak2_65_41_0.367693582045754_5.57616421380164_0.688538237251116-2 chr14 21547434 21548024 + 0.688538237251116 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 47944 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak1_65_41_0.367693582045754_5.57616421380164_0.688538237251116-2 chr14 36918865 36919533 + 0.688538237251116 NA intron (NM_028407, intron 2 of 7) intron (NM_028407, intron 2 of 7) 336 NM_001347503 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak2_65_41_0.367693582045754_5.57616421380164_0.688538237251116-3 chr18 50023427 50024099 + 0.688538237251116 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -7221 NM_001360935 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_49_54_-0.419060851372351_5.57182928783848_0.688538237251116-2 chr2 102400544 102401175 + 0.688538237251116 NA promoter-TSS (NM_020267) promoter-TSS (NM_020267) 41 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding common_peak1_65_41_0.367693582045754_5.57616421380164_0.688538237251116-5 chr8 72420695 72421405 + 0.688538237251116 NA intron (NM_001122832, intron 1 of 15) CpG 424 NM_001122832 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak2_121_82_0.265061658382708_6.50757026053828_0.688232488689754-3 chr9 98563728 98564782 + 0.688232488689754 NA promoter-TSS (NR_029444) promoter-TSS (NR_029444) 524 NM_015827 50797 Mm.400464 NM_015827 ENSMUSG00000032458 Copb2 AI256832 coatomer protein complex, subunit beta 2 (beta prime) protein-coding common_peak2_121_82_0.265061658382708_6.50757026053828_0.688232488689754 chr17 66750972 66752150 + 0.688232488689754 NA intron (NM_001357625, intron 20 of 32) intron (NM_001357625, intron 20 of 32) 37105 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA common_peak2_121_82_0.265061658382708_6.50757026053828_0.688232488689754-2 chr8 27260407 27261199 + 0.688232488689754 NA intron (NM_007918, intron 1 of 2) intron (NM_007918, intron 1 of 2) 476 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak2_99_100_-0.302967600172731_6.50672768266543_0.688232488689729-2 chr8 120100919 120101731 + 0.688232488689729 NA 5' UTR (NM_133967, exon 1 of 8) 5' UTR (NM_133967, exon 1 of 8) 147 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak1_99_100_-0.302967600172731_6.50672768266543_0.688232488689729 chr19 45997787 45998540 + 0.688232488689729 NA promoter-TSS (NR_152221) promoter-TSS (NR_152221) 26 NR_152221 100174921 Mm.487206 NR_152221 4930505N22Rik - RIKEN cDNA 4930505N22 gene ncRNA common_peak2_99_100_-0.302967600172731_6.50672768266543_0.688232488689729 chr5 76974372 76975677 + 0.688232488689729 NA intron (NM_025691, intron 1 of 18) CpG 323 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak1_97_64_0.303935350764356_6.17433548841063_0.687867803885541-3 chr19 57198773 57199508 + 0.687867803885541 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) -1509 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_77_80_-0.3405312057753_6.16958439999697_0.687867803885541-2 chr16 43363174 43364340 + 0.687867803885541 NA intron (NM_181058, intron 2 of 6) intron (NM_181058, intron 2 of 6) 56439 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak1_77_80_-0.3405312057753_6.16958439999697_0.687867803885541 chr11 49050573 49051488 + 0.687867803885541 NA 5' UTR (NM_173434, exon 2 of 3).2 5' UTR (NM_173434, exon 2 of 3).2 212 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_97_64_0.303935350764356_6.17433548841063_0.687867803885541 chr11 86646814 86647610 + 0.687867803885541 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 24063 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_97_64_0.303935350764356_6.17433548841063_0.687867803885541-2 chr17 25791647 25793430 + 0.687867803885541 NA promoter-TSS (NM_001285982) promoter-TSS (NM_001285982) -144 NM_145410 214917 Mm.26783 NM_145410 ENSMUSG00000057411 Fam173a - family with sequence similarity 173, member A protein-coding common_peak2_77_80_-0.3405312057753_6.16958439999697_0.687867803885541 chr10 21994732 21995842 + 0.687867803885541 NA intron (NM_011361, intron 2 of 11) intron (NM_011361, intron 2 of 11) 621 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_152_147_-0.245006283410833_7.08695022392353_0.687846752953741 chr18 68299378 68300970 + 0.687846752953741 NA promoter-TSS (NM_026440) promoter-TSS (NM_026440) 159 NM_153794 108654 Mm.125857 NM_153794 ENSMUSG00000038121 Fam210a 4933403F05Rik|AA987140|AV134576|AW491926 family with sequence similarity 210, member A protein-coding common_peak1_308_222_0.170468087792132_7.88613394381637_0.68736279552462 chr7 141466612 141469044 + 0.68736279552462 NA promoter-TSS (NM_001111050) promoter-TSS (NM_001111050) -57 NR_152219 100126795 Mm.386851 NR_152219 ENSMUSG00000073787 Gm10575 - predicted gene 10575 ncRNA common_peak2_88_90_-0.319487413798769_6.34805093329931_0.686734409380264 chr4 141278409 141279508 + 0.686734409380264 NA intron (NR_151527, intron 1 of 1) intron (NR_151527, intron 1 of 1) 519 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak1_109_73_0.282323956148744_6.35061534370332_0.686734409380264 chr8 107436020 107437330 + 0.686734409380264 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 277 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_67_71_-0.367149123679105_5.98635043960276_0.686639154984678 chr11 116842663 116843258 + 0.686639154984678 NA promoter-TSS (NM_028865) promoter-TSS (NM_028865) 489 NM_033398 107817 Mm.481684 NM_033398 ENSMUSG00000056962 Jmjd6 5730436I23Rik|D11Ertd195e|PSR|PtdSerR|Ptdsr|mKIAA0585 jumonji domain containing 6 protein-coding common_peak1_86_56_0.322858609439979_5.99431931888473_0.686639154984678-2 chr6 72389767 72390470 + 0.686639154984678 NA intron (NM_016794, intron 1 of 2) intron (NM_016794, intron 1 of 2) 549 NM_016794 22320 Mm.1838 NM_016794 ENSMUSG00000050732 Vamp8 AU041171|Edb|endobrevin vesicle-associated membrane protein 8 protein-coding common_peak1_67_71_-0.367149123679105_5.98635043960276_0.686639154984678 chr2 34771096 34771720 + 0.686639154984678 NA promoter-TSS (NM_022310) promoter-TSS (NM_022310) -682 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak2_86_56_0.322858609439979_5.99431931888473_0.686639154984678 chr10 82859317 82859776 + 0.686639154984678 NA promoter-TSS (NM_001042514) promoter-TSS (NM_001042514) 340 NM_015762 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak2_67_71_-0.367149123679105_5.98635043960276_0.686639154984678-3 chr7 66342838 66343618 + 0.686639154984678 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 38496 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_86_56_0.322858609439979_5.99431931888473_0.686639154984678 chr12 73123723 73124859 + 0.686639154984678 NA intron (NM_008612, intron 1 of 7) AT_rich|Low_complexity|Low_complexity 574 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding common_peak2_86_56_0.322858609439979_5.99431931888473_0.686639154984678-2 chr7 134670652 134671510 + 0.686639154984678 NA intron (NM_001033420, intron 1 of 51) CpG 394 NM_001033420 330662 Mm.436572 NM_001033420 ENSMUSG00000058325 Dock1 9130006G06Rik|AI854900|D630004B07Rik|b2b3190Clo dedicator of cytokinesis 1 protein-coding common_peak1_86_56_0.322858609439979_5.99431931888473_0.686639154984678-3 chr9 123243124 123244018 + 0.686639154984678 NA Intergenic Intergenic 17218 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding common_peak1_67_71_-0.367149123679105_5.98635043960276_0.686639154984678-3 chr7 130519698 130520173 + 0.686639154984678 NA promoter-TSS (NM_001136054) promoter-TSS (NM_001136054) -355 NM_013799 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding common_peak1_67_71_-0.367149123679105_5.98635043960276_0.686639154984678-2 chr7 66342797 66343630 + 0.686639154984678 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 38511 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_67_71_-0.367149123679105_5.98635043960276_0.686639154984678-2 chr2 105398389 105399093 + 0.686639154984678 NA intron (NM_009037, intron 1 of 5) CpG 578 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding common_peak1_164_114_0.227122873060775_6.95905148747476_0.686073288340673 chr9 108306387 108307324 + 0.686073288340673 NA promoter-TSS (NM_001313961) promoter-TSS (NM_001313961) 58 NM_001313962 11848 Mm.757 NM_016802 ENSMUSG00000007815 Rhoa Arha|Arha1|Arha2 ras homolog family member A protein-coding common_peak1_561_496_-0.128858949933051_8.89267256659576_0.684981282753726 chr11 86582860 86586828 + 0.684981282753726 NA promoter-TSS (NR_029738) promoter-TSS (NR_029738) -686 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_123_83_0.271077137200777_6.52785599137915_0.684010183342846 chr3 122088729 122089867 + 0.684010183342846 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 44838 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_122_83_0.259477747049132_6.52205629630333_0.684010183342846 chr8 75034250 75035132 + 0.684010183342846 NA intron (NM_001136259, intron 1 of 15) intron (NM_001136259, intron 1 of 15) 1005 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding common_peak2_100_101_-0.302927442714082_6.52096162061445_0.684010183342821 chr1 135843540 135844478 + 0.684010183342821 NA intron (NM_001130175, intron 3 of 13) intron (NM_001130175, intron 3 of 13) 3148 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak2_113_112_-0.277234885215831_6.68156151980727_0.683970344926767-2 chr2 162930804 162932248 + 0.683970344926767 NA promoter-TSS (NM_026499) promoter-TSS (NM_026499) 18 NM_026499 67996 Mm.24042 NM_026499 ENSMUSG00000016921 Srsf6 1210001E11Rik|AI314910|AW146126|Sfrs6 serine/arginine-rich splicing factor 6 protein-coding common_peak2_113_112_-0.277234885215831_6.68156151980727_0.683970344926767 chr19 5806073 5807165 + 0.683970344926767 NA Intergenic Intergenic -3947 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_136_93_0.251626722438142_6.68040221289671_0.683970344926742 chr15 35937104 35938114 + 0.683970344926742 NA intron (NM_053071, intron 1 of 3) intron (NM_053071, intron 1 of 3) 637 NM_053071 12864 Mm.548 NM_053071 ENSMUSG00000014313 Cox6c - cytochrome c oxidase subunit VIc protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-4 chr3 98055855 98056319 + 0.683734619884041 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 42549 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_42_47_-0.438719970511724_5.36560251546529_0.683734619884041 chr17 72959180 72959579 + 0.683734619884041 NA Intergenic Intergenic 41074 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041 chr1 58654443 58655033 + 0.683734619884041 NA intron (NR_045007, intron 1 of 1) intron (NR_045007, intron 1 of 1) 2097 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-7 chr7 28169815 28170297 + 0.683734619884041 NA intron (NM_007991, intron 1 of 8) CpG 308 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak2_42_47_-0.438719970511724_5.36560251546529_0.683734619884041-4 chr17 45747155 45747572 + 0.683734619884041 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 12857 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-3 chr8 70234714 70235190 + 0.683734619884041 NA promoter-TSS (NM_133972) promoter-TSS (NM_133972) -530 NM_133972 76813 Mm.383251 NM_133972 ENSMUSG00000002343 Armc6 2410153K17Rik|AW554412 armadillo repeat containing 6 protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-9 chr9 110304753 110305446 + 0.683734619884041 NA promoter-TSS (NM_001081381) promoter-TSS (NM_001081381) -93 NM_001081381 72341 Mm.374250 NM_001081381 ENSMUSG00000054836 Elp6 2610001P13Rik|2610002I17Rik|AV159994|Tmem103 elongator acetyltransferase complex subunit 6 protein-coding common_peak2_42_47_-0.438719970511724_5.36560251546529_0.683734619884041-2 chr13 69592788 69593509 + 0.683734619884041 NA intron (NM_175283, intron 3 of 4) ORR1E|LTR|ERVL-MaLR 18315 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-2 chr18 64488499 64489071 + 0.683734619884041 NA intron (NM_007998, intron 1 of 10) intron (NM_007998, intron 1 of 10) 313 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-8 chr8 95807713 95808109 + 0.683734619884041 NA promoter-TSS (NM_178078) promoter-TSS (NM_178078) -449 NM_001205226 234594 Mm.259220 NM_153164 ENSMUSG00000036550 Cnot1 6030411K04Rik|AA815922|D830048B13 CCR4-NOT transcription complex, subunit 1 protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-3 chr12 13100676 13101207 + 0.683734619884041 NA Intergenic Intergenic 148233 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak1_41_47_-0.472427804701776_5.34874859837027_0.683734619884041 chr1 194976360 194977029 + 0.683734619884041 NA non-coding (NR_033564, exon 1 of 5) non-coding (NR_033564, exon 1 of 5) 265 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_42_47_-0.438719970511724_5.36560251546529_0.683734619884041-5 chr8 106415373 106415953 + 0.683734619884041 NA 5' UTR (NM_011764, exon 1 of 4) 5' UTR (NM_011764, exon 1 of 4) 324 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-2 chr11 48817113 48817412 + 0.683734619884041 NA 5' UTR (NM_145377, exon 1 of 6) 5' UTR (NM_145377, exon 1 of 6) 129 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-6 chr6 5139232 5139749 + 0.683734619884041 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 54456 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding unique_peak1_41_47_-0.472427804701776_5.34874859837027_0.683734619884041 chr13 63814642 63815091 + 0.683734619884041 NA promoter-TSS (NM_023507) promoter-TSS (NM_023507) -374 NM_001361124 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding common_peak2_42_47_-0.438719970511724_5.36560251546529_0.683734619884041-3 chr17 25115535 25115995 + 0.683734619884041 NA 5' UTR (NM_001163661, exon 1 of 21) 5' UTR (NM_001163661, exon 1 of 21) 140 NM_027880 71718 Mm.288702 NM_027880 ENSMUSG00000024170 Telo2 1200003M09Rik|AI415602|Tel2|mKIAA0683 telomere maintenance 2 protein-coding common_peak2_42_47_-0.438719970511724_5.36560251546529_0.683734619884041 chr11 78511711 78512100 + 0.683734619884041 NA promoter-TSS (NM_026389) promoter-TSS (NM_026389) 263 NM_199199 195040 Mm.383431 NM_199199 ENSMUSG00000051232 Tmem199 AI316787|AI848469|R74819 transmembrane protein 199 protein-coding common_peak1_42_47_-0.438719970511724_5.36560251546529_0.683734619884041-2 chr5 92929259 92929991 + 0.683734619884041 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 31632 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_41_47_-0.472427804701776_5.34874859837027_0.683734619884041-5 chr5 105801711 105802282 + 0.683734619884041 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -74572 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_56_35_0.380074055330289_5.35996202910746_0.683734619884035-4 chr19 21271586 21272029 + 0.683734619884035 NA promoter-TSS (NM_009551) promoter-TSS (NM_009551) -471 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_56_35_0.380074055330289_5.35996202910746_0.683734619884035-5 chr8 119810849 119811322 + 0.683734619884035 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 29494 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_56_35_0.380074055330289_5.35996202910746_0.683734619884035-2 chr12 69168530 69168813 + 0.683734619884035 NA promoter-TSS (NM_001081406) promoter-TSS (NM_001081406) -143 NR_155206 69706 Mm.28847 NM_001081406 ENSMUSG00000034883 Lrr1 2410005L11Rik|AU021780|LRR-1|Ppil5 leucine rich repeat protein 1 protein-coding common_peak2_56_35_0.380074055330289_5.35996202910746_0.683734619884035-3 chr6 145863551 145864185 + 0.683734619884035 NA intron (NM_001271768, intron 4 of 4) CpG 1552 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_56_35_0.380074055330289_5.35996202910746_0.683734619884035-3 chr18 38190662 38191190 + 0.683734619884035 NA Intergenic Intergenic 18836 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_56_35_0.380074055330289_5.35996202910746_0.683734619884035 chr11 83816587 83817113 + 0.683734619884035 NA Intergenic Intergenic -34019 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_56_35_0.380074055330289_5.35996202910746_0.683734619884035 chr12 69168532 69168803 + 0.683734619884035 NA promoter-TSS (NM_001081406) promoter-TSS (NM_001081406) -147 NR_155206 69706 Mm.28847 NM_001081406 ENSMUSG00000034883 Lrr1 2410005L11Rik|AU021780|LRR-1|Ppil5 leucine rich repeat protein 1 protein-coding common_peak2_56_35_0.380074055330289_5.35996202910746_0.683734619884035-2 chr2 151008911 151009349 + 0.683734619884035 NA intron (NM_207204, intron 1 of 23) CpG 268 NM_207204 78177 Mm.120911 NM_207204 ENSMUSG00000068115 Ninl 4930519N13Rik|Gm1004|Gm1634|mKIAA0980 ninein-like protein-coding common_peak1_251_179_0.187407242770671_7.58555671771501_0.683592235331451 chr15 37006386 37008134 + 0.683592235331451 NA 5' UTR (NM_026521, exon 1 of 4) 5' UTR (NM_026521, exon 1 of 4) 142 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak2_34_40_-0.50619601207228_5.10445399858194_0.683454027796267-4 chr5 136049063 136049732 + 0.683454027796267 NA Intergenic Intergenic -7870 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-5 chr16 24491128 24491518 + 0.683454027796267 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -37991 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-2 chr2 157422075 157422674 + 0.683454027796267 NA Intergenic Intergenic -1919 NM_009271 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_34_40_-0.50619601207228_5.10445399858194_0.683454027796267 chr11 20113241 20113684 + 0.683454027796267 NA promoter-TSS (NM_146243) promoter-TSS (NM_146243) -511 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak1_34_40_-0.50619601207228_5.10445399858194_0.683454027796267 chr15 88855747 88856219 + 0.683454027796267 NA Intergenic Intergenic -6211 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-3 chr19 5748443 5749180 + 0.683454027796267 NA intron (NM_008520, intron 11 of 27) intron (NM_008520, intron 11 of 27) 7907 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-2 chr8 80860809 80861492 + 0.683454027796267 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 19329 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-5 chr3 108131932 108132698 + 0.683454027796267 NA intron (NM_010306, intron 1 of 8) intron (NM_010306, intron 1 of 8) 13837 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-2 chr1 164457159 164457824 + 0.683454027796267 NA intron (NM_009721, intron 1 of 5) intron (NM_009721, intron 1 of 5) 864 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak2_34_40_-0.50619601207228_5.10445399858194_0.683454027796267-5 chr8 71371281 71371547 + 0.683454027796267 NA non-coding (NR_122030, exon 1 of 3) non-coding (NR_122030, exon 1 of 3) 116 NM_001293800 77090 Mm.440170 NM_029865 ENSMUSG00000002396 Ocel1 9430098E02Rik|AI326022|AI593544 occludin/ELL domain containing 1 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-2 chr18 82490776 82491150 + 0.683454027796267 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 15840 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_48_29_0.426467547757536_5.12012436948729_0.683454027796267 chr14 30825640 30826132 + 0.683454027796267 NA exon (NM_028839, exon 1 of 8) exon (NM_028839, exon 1 of 8) 292 NM_028839 69179 Mm.143025 NM_028839 ENSMUSG00000006526 Tmem110 1810038N08Rik|2310014H19Rik|AW554125|STIMATE transmembrane protein 110 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-9 chr9 114025938 114026622 + 0.683454027796267 NA intron (NM_178624, intron 1 of 14) intron (NM_178624, intron 1 of 14) 471 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-4 chr4 154247854 154248474 + 0.683454027796267 NA intron (NM_001162977, intron 5 of 36) intron (NM_001162977, intron 5 of 36) 51731 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-8 chr9 35421552 35421969 + 0.683454027796267 NA Intergenic CpG -30316 NM_021339 57810 Mm.80509 NM_021339 ENSMUSG00000038119 Cdon CDO|Cd0|Orcam cell adhesion molecule-related/down-regulated by oncogenes protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-3 chr10 91158771 91159390 + 0.683454027796267 NA intron (NM_001080129, intron 3 of 8) intron (NM_001080129, intron 3 of 8) 11470 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_34_40_-0.50619601207228_5.10445399858194_0.683454027796267-2 chr14 27039146 27039733 + 0.683454027796267 NA intron (NM_134437, intron 1 of 12) CpG 438 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak2_48_29_0.426467547757536_5.12012436948729_0.683454027796267-2 chr3 102366047 102366616 + 0.683454027796267 NA Intergenic Intergenic -103588 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-3 chr3 51150749 51151112 + 0.683454027796267 NA Intergenic Intergenic -73517 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-8 chr4 139225794 139226441 + 0.683454027796267 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 32006 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_34_40_-0.50619601207228_5.10445399858194_0.683454027796267-2 chr5 137101791 137102091 + 0.683454027796267 NA Intergenic ID_B1|SINE|B4 14266 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267 chr1 75478823 75479354 + 0.683454027796267 NA promoter-TSS (NM_177056) promoter-TSS (NM_177056) 383 NM_001001566 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-6 chr4 149485390 149485816 + 0.683454027796267 NA promoter-TSS (NM_133435) promoter-TSS (NM_133435) 337 NM_026963 69151 Mm.464434 NM_026963 ENSMUSG00000028990 Lzic 1810030J04Rik|AW047580 leucine zipper and CTNNBIP1 domain containing protein-coding common_peak2_34_40_-0.50619601207228_5.10445399858194_0.683454027796267-3 chr3 37883112 37883879 + 0.683454027796267 NA Intergenic ID_B1|SINE|B4 -15318 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-9 chr9 72713757 72714610 + 0.683454027796267 NA intron (NM_010890, intron 9 of 28) intron (NM_010890, intron 9 of 28) 20885 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-6 chr5 139912697 139912984 + 0.683454027796267 NA intron (NM_175522, intron 1 of 1) CpG 4897 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-5 chr5 113216612 113217038 + 0.683454027796267 NA Intergenic Intergenic -10084 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267 chr11 117260543 117261076 + 0.683454027796267 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -5437 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-10 chrX 7842056 7842571 + 0.683454027796267 NA exon (NM_138604, exon 1 of 9) exon (NM_138604, exon 1 of 9) 231 NM_001290537 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-6 chr3 104706660 104707269 + 0.683454027796267 NA Intergenic Intergenic 68300 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-8 chr8 122610895 122611457 + 0.683454027796267 NA promoter-TSS (NM_021502) promoter-TSS (NM_021502) 311 NM_001193645 50917 Mm.1786 NM_016722 ENSMUSG00000015027 Galns mFLJ00319 galactosamine (N-acetyl)-6-sulfate sulfatase protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-7 chr4 135254995 135255515 + 0.683454027796267 NA intron (NM_013885, intron 1 of 5) intron (NM_013885, intron 1 of 5) 17505 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267-4 chr11 115420206 115420855 + 0.683454027796267 NA promoter-TSS (NM_027862) promoter-TSS (NM_027862) 404 NM_183285 70382 Mm.276299 NM_183285 ENSMUSG00000016940 Kctd2 2310012I15Rik potassium channel tetramerisation domain containing 2 protein-coding unique_peak2_34_40_-0.50619601207228_5.10445399858194_0.683454027796267 chr11 69058731 69059473 + 0.683454027796267 NA promoter-TSS (NM_028005) promoter-TSS (NM_028005) -673 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267 chr1 20998319 20998678 + 0.683454027796267 NA Intergenic Intergenic 46872 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-7 chr7 116201041 116201679 + 0.683454027796267 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -2799 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267 chr15 76606955 76607446 + 0.683454027796267 NA intron (NM_001361485, intron 1 of 36) intron (NM_001361485, intron 1 of 36) 391 NM_053193 94230 Mm.45141 NM_053193 ENSMUSG00000034022 Cpsf1 CPSF160 cleavage and polyadenylation specific factor 1 protein-coding common_peak1_48_29_0.426467547757536_5.12012436948729_0.683454027796267-4 chr19 29101512 29101785 + 0.683454027796267 NA intron (NM_021525, intron 1 of 8) CpG 273 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding unique_peak1_47_29_0.396930071263487_5.10535563124026_0.683454027796267 chr6 54972063 54972524 + 0.683454027796267 NA promoter-TSS (NM_001171007) promoter-TSS (NM_001171007) 319 NM_172729 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_47_29_0.396930071263487_5.10535563124026_0.683454027796267-7 chr5 147589218 147589911 + 0.683454027796267 NA intron (NM_010228, intron 19 of 29) intron (NM_010228, intron 19 of 29) 136424 NM_010228 14254 Mm.389712 NM_010228 ENSMUSG00000029648 Flt1 AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1 FMS-like tyrosine kinase 1 protein-coding common_peak1_98_65_0.296452487693515_6.19262036320521_0.682547129033676-2 chr2 165886659 165887891 + 0.682547129033676 NA Intergenic Intergenic -2437 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_98_65_0.296452487693515_6.19262036320521_0.682547129033676 chr16 93832319 93832970 + 0.682547129033676 NA intron (NM_001045529, intron 1 of 16) CpG 523 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_98_65_0.296452487693515_6.19262036320521_0.682547129033676-2 chr6 4488753 4489985 + 0.682547129033676 NA Intergenic Intergenic -16249 NM_007743 12843 Mm.277792 NM_007743 ENSMUSG00000029661 Col1a2 AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim collagen, type I, alpha 2 protein-coding common_peak2_78_81_-0.339984338342807_6.18755983544668_0.682547129033676 chr11 103266623 103267340 + 0.682547129033676 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 420 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak2_98_65_0.296452487693515_6.19262036320521_0.682547129033676 chr14 27428811 27429477 + 0.682547129033676 NA exon (NM_001114879, exon 1 of 24) exon (NM_001114879, exon 1 of 24) 310 NM_001114879 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak2_126_124_-0.268144663088171_6.831711953118_0.682480138138513 chr8 122566789 122567898 + 0.682480138138513 NA promoter-TSS (NM_026014) promoter-TSS (NM_026014) -672 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding common_peak1_151_104_0.240807977732536_6.83464950653239_0.682480138138488 chr8 31820178 31821551 + 0.682480138138488 NA intron (NM_178591, intron 8 of 8) intron (NM_178591, intron 8 of 8) 97339 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_151_104_0.240807977732536_6.83464950653239_0.682480138138488 chr4 94602408 94603483 + 0.682480138138488 NA exon (NM_172695, exon 1 of 14) exon (NM_172695, exon 1 of 14) 302 NM_172695 18786 Mm.490101 NM_172695 ENSMUSG00000028577 Plaa 2410007N06|AI536418|AU018445|AW208417|D4Ertd618e|PLA2P|PLAP|Ufd3 phospholipase A2, activating protein protein-coding common_peak2_154_149_-0.245767231762464_7.10593507461465_0.682228703758087 chr19 8983266 8984386 + 0.682228703758087 NA Intergenic Intergenic -5458 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_155_149_-0.2365548729598_7.11054125401598_0.682228703758087 chr4 133671846 133673717 + 0.682228703758087 NA promoter-TSS (NM_001145956) promoter-TSS (NM_001145956) -134 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_89_91_-0.319248788203674_6.36393756195518_0.682042446238145 chr8 122144359 122144793 + 0.682042446238145 NA Intergenic Intergenic -137565 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_89_91_-0.319248788203674_6.36393756195518_0.682042446238145 chr9 113707873 113708558 + 0.682042446238145 NA promoter-TSS (NM_001164677) promoter-TSS (NM_001164677) 44 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding common_peak2_59_63_-0.376522434374115_5.81173878281294_0.682033507942409-2 chr6 83325870 83326483 + 0.682033507942409 NA 5' UTR (NM_145571, exon 1 of 6) 5' UTR (NM_145571, exon 1 of 6) 137 NM_145571 232157 Mm.29500 NM_145571 ENSMUSG00000043131 Mob1a 4022402H07Rik|MOB1|MOB4B|Mobk1b|Mobkl1b MOB kinase activator 1A protein-coding common_peak2_59_63_-0.376522434374115_5.81173878281294_0.682033507942409 chr16 42874065 42875023 + 0.682033507942409 NA intron (NR_040522, intron 1 of 1) intron (NR_040522, intron 1 of 1) 1043 NR_040521 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA common_peak1_59_63_-0.376522434374115_5.81173878281294_0.682033507942409 chr6 82128160 82129022 + 0.682033507942409 NA Intergenic B1_Mur2|SINE|Alu 86963 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding unique_peak2_59_63_-0.376522434374115_5.81173878281294_0.682033507942409 chr19 46459658 46460446 + 0.682033507942409 NA intron (NM_001025391, intron 8 of 11) intron (NM_001025391, intron 8 of 11) -41596 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_76_49_0.336978262396465_5.81234532097296_0.682033507942397 chr19 9977976 9978426 + 0.682033507942397 NA Intergenic Intergenic -2399 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_313_226_0.167813844160247_7.91045540937104_0.680929432196941 chr19 3767426 3768822 + 0.680929432196941 NA 5' UTR (NM_001167886, exon 2 of 11) 5' UTR (NM_001167886, exon 2 of 11) 703 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak2_69_72_-0.345523545907459_6.01706278592629_0.680633324097791-2 chr3 90601808 90603196 + 0.680633324097791 NA 3' UTR (NM_001355597, exon 3 of 3) 3' UTR (NM_001355597, exon 3 of 3) -1268 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak1_68_72_-0.366135654856309_6.00675673145186_0.680633324097791 chr2 157367649 157368178 + 0.680633324097791 NA intron (NM_026968, intron 1 of 2) CpG 319 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding common_peak1_69_72_-0.345523545907459_6.01706278592629_0.680633324097791 chr15 90432607 90433280 + 0.680633324097791 NA Intergenic Intergenic 79233 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA common_peak2_69_72_-0.345523545907459_6.01706278592629_0.680633324097791-4 chr5 77309927 77310973 + 0.680633324097791 NA promoter-TSS (NM_153798) promoter-TSS (NM_153798) -34 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak2_69_72_-0.345523545907459_6.01706278592629_0.680633324097791 chr13 94057814 94058667 + 0.680633324097791 NA intron (NM_172589, intron 1 of 3) intron (NM_172589, intron 1 of 3) 444 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_69_72_-0.345523545907459_6.01706278592629_0.680633324097791-3 chr4 139535578 139536382 + 0.680633324097791 NA intron (NM_183148, intron 3 of 11) intron (NM_183148, intron 3 of 11) 5432 NM_183148 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_87_57_0.314139427896244_6.01505070907569_0.680633324097779 chr2 151961420 151962407 + 0.680633324097779 NA Intergenic Intergenic 5704 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak1_87_57_0.314139427896244_6.01505070907569_0.680633324097779-2 chr4 133756526 133757574 + 0.680633324097779 NA Intergenic Intergenic -3439 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_66_42_0.35528826293829_5.60390888617124_0.680499470139652-2 chr1 190911111 190912152 + 0.680499470139652 NA exon (NM_178775, exon 1 of 15) exon (NM_178775, exon 1 of 15) 139 NM_178775 320119 Mm.220912 NM_178775 ENSMUSG00000089872 Rps6kc1 AA682037|B130003F20Rik|C80612|Rpk118 ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_66_42_0.35528826293829_5.60390888617124_0.680499470139652-2 chr17 34627721 34628352 + 0.680499470139652 NA promoter-TSS (NM_001302394) promoter-TSS (NM_001302394) -20 NM_001302394 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding common_peak2_50_55_-0.416688462493697_5.59901069081076_0.680499470139652-3 chr4 105937099 105937706 + 0.680499470139652 NA Intergenic Intergenic -303811 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak2_66_42_0.35528826293829_5.60390888617124_0.680499470139652 chr11 98795885 98796393 + 0.680499470139652 NA exon (NM_001361932, exon 1 of 3) exon (NM_001361932, exon 1 of 3) 623 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male specific lethal 1 protein-coding common_peak1_66_42_0.35528826293829_5.60390888617124_0.680499470139652-5 chr8 107047795 107048694 + 0.680499470139652 NA TTS (NM_139229) TTS (NM_139229) 370 NM_026513 68023 Mm.482335 NM_026513 ENSMUSG00000078931 Pdf 2610019N19Rik peptide deformylase (mitochondrial) protein-coding common_peak1_66_42_0.35528826293829_5.60390888617124_0.680499470139652 chr1 150392423 150393045 + 0.680499470139652 NA promoter-TSS (NM_133780) promoter-TSS (NM_133780) -104 NM_133780 108989 Mm.174256 NM_133780 ENSMUSG00000006005 Tpr 2610029M07Rik|C77892 translocated promoter region, nuclear basket protein protein-coding common_peak1_66_42_0.35528826293829_5.60390888617124_0.680499470139652-4 chr8 75033670 75034019 + 0.680499470139652 NA intron (NM_001136259, intron 1 of 15) CpG 158 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding common_peak2_50_55_-0.416688462493697_5.59901069081076_0.680499470139652 chr10 80677458 80678040 + 0.680499470139652 NA Intergenic Intergenic -1456 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak1_66_42_0.35528826293829_5.60390888617124_0.680499470139652-3 chr11 99573555 99574204 + 0.680499470139652 NA Intergenic Intergenic 7137 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding common_peak2_50_55_-0.416688462493697_5.59901069081076_0.680499470139652-2 chr3 123267526 123268152 + 0.680499470139652 NA intron (NM_027135, intron 1 of 22) CpG 343 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding common_peak1_50_55_-0.416688462493697_5.59901069081076_0.680499470139652 chr17 78386958 78387594 + 0.680499470139652 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 30876 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_66_42_0.35528826293829_5.60390888617124_0.680499470139652-6 chr9 49921472 49922246 + 0.680499470139652 NA Intergenic Intergenic -122466 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_187_177_-0.216182086810831_7.36764238756098_0.68038546620739 chr11 60113030 60115201 + 0.68038546620739 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 9102 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_217_153_0.2048533648603_7.36921322312505_0.680385466207341 chr8 34964221 34965700 + 0.680385466207341 NA intron (NM_175091, intron 1 of 26) intron (NM_175091, intron 1 of 26) 730 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak1_137_94_0.246778316119517_6.69324476639071_0.68025994052425 chr3 87909734 87910495 + 0.68025994052425 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 3264 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_114_113_-0.277434793187853_6.69417261757081_0.680259940524225 chr9 57437333 57438977 + 0.680259940524225 NA intron (NR_152146, intron 1 of 5) intron (NR_152146, intron 1 of 5) 1581 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_167_116_0.228060017289487_6.98439472822815_0.67997149191956 chr13 52658876 52660052 + 0.67997149191956 NA Intergenic Intergenic 62582 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak2_141_137_-0.250958694644681_6.98304510945583_0.67997149191956 chr15 86169354 86170630 + 0.67997149191956 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) -15736 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak2_102_102_-0.288913162124992_6.54204394612072_0.679879113545623 chr1 92831741 92832840 + 0.679879113545623 NA intron (NM_016696, intron 1 of 8) CpG 645 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_102_102_-0.288913162124992_6.54204394612072_0.679879113545623 chr11 69580465 69581464 + 0.679879113545623 NA intron (NM_001127233, intron 1 of 10) intron (NM_001127233, intron 1 of 10) 605 NM_001127233 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding common_peak1_124_84_0.265509845195242_6.54214585873532_0.679879113545623 chr1 75210501 75211508 + 0.679879113545623 NA promoter-TSS (NM_029010) promoter-TSS (NM_029010) 175 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak2_156_150_-0.236987428300672_7.11991102517474_0.679480498304833 chr2 60701659 60703283 + 0.679480498304833 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 20132 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_156_150_-0.236987428300672_7.11991102517474_0.679480498304833 chr2 60701727 60703294 + 0.679480498304833 NA intron (NM_001159564, intron 1 of 17) (TCCC)n|Simple_repeat|Simple_repeat 20093 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_127_125_-0.268404818001853_6.84307751449899_0.679154742683855 chr13 96669849 96671261 + 0.679154742683855 NA 5' UTR (NM_001360166, exon 1 of 20) 5' UTR (NM_001360166, exon 1 of 20) 381 NM_001360165 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak1_128_125_-0.257256770636274_6.84865153818178_0.679154742683855 chr11 20201401 20202250 + 0.679154742683855 NA intron (NM_008996, intron 1 of 5) CpG 413 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding common_peak2_128_125_-0.257256770636274_6.84865153818178_0.679154742683855 chr4 155846819 155848862 + 0.679154742683855 NA exon (NM_010091, exon 1 of 15) exon (NM_010091, exon 1 of 15) 438 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak1_152_105_0.236526627654919_6.84618376839066_0.67915474268383 chr8 104641285 104642424 + 0.67915474268383 NA promoter-TSS (NM_026753) promoter-TSS (NM_026753) -126 NM_026753 68523 Mm.279 NM_026753 ENSMUSG00000031879 Fam96b 1110019N10Rik family with sequence similarity 96, member B protein-coding common_peak2_172_164_-0.225885174378961_7.25337962705634_0.678013636639664-2 chr6 97177683 97179555 + 0.678013636639664 NA intron (NM_001081111, intron 1 of 16) intron (NM_001081111, intron 1 of 16) 505 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak2_172_164_-0.225885174378961_7.25337962705634_0.678013636639664 chr10 17574894 17577138 + 0.678013636639664 NA Intergenic Intergenic -147212 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_255_182_0.186120287640776_7.60875998210443_0.67769784981989 chr19 4211379 4212681 + 0.67769784981989 NA Intergenic Intergenic -2208 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-9 chr8 14910907 14911237 + 0.677583764578261 NA promoter-TSS (NM_172751) promoter-TSS (NM_172751) -591 NM_172751 234094 Mm.240298 NM_172751 ENSMUSG00000071176 Arhgef10 6430549H08Rik|mKIAA0294 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-2 chr10 79097187 79097513 + 0.677583764578261 NA intron (NM_001004362, intron 1 of 5) intron (NM_001004362, intron 1 of 5) 250 NM_001359715 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-3 chr12 84187079 84187599 + 0.677583764578261 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 6676 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-5 chr3 9250644 9250885 + 0.677583764578261 NA 5' UTR (NM_177660, exon 1 of 6) 5' UTR (NM_177660, exon 1 of 6) 197 NM_177660 229055 Mm.103262 NM_177660 ENSMUSG00000069114 Zbtb10 4832414A18|AU021107|RINZF zinc finger and BTB domain containing 10 protein-coding unique_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-3 chr2 181598241 181599016 + 0.677583764578261 NA intron (NM_172676, intron 1 of 4) intron (NM_172676, intron 1 of 4) 519 NM_172676 229011 Mm.205422 NM_172676 ENSMUSG00000038605 Samd10 D930033N23Rik|E130318E08 sterile alpha motif domain containing 10 protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-8 chr7 101933460 101933770 + 0.677583764578261 NA intron (NM_027053, intron 1 of 5) intron (NM_027053, intron 1 of 5) 242 NM_027053 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding unique_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261 chr11 118342816 118343316 + 0.677583764578261 NA promoter-TSS (NM_021440) promoter-TSS (NM_021440) -532 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-8 chr8 25841208 25841510 + 0.677583764578261 NA promoter-TSS (NM_011791) promoter-TSS (NM_011791) -572 NM_011791 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ASH2 like histone lysine methyltransferase complex subunit protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-9 chr8 31371183 31371564 + 0.677583764578261 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 3624 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-5 chr8 94787468 94787810 + 0.677583764578261 NA Intergenic Intergenic 15459 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-8 chr5 105809045 105809607 + 0.677583764578261 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -67242 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-9 chrX 96020073 96020416 + 0.677583764578261 NA Intergenic Intergenic -63270 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-2 chr2 60635850 60636273 + 0.677583764578261 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 37632 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-7 chr7 73607125 73607570 + 0.677583764578261 NA Intergenic Intergenic -48952 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-6 chr8 106560498 106561115 + 0.677583764578261 NA Intergenic Intergenic -26337 NR_045470 68692 Mm.416843 NR_045470 ENSMUSG00000099139 1110028F18Rik - RIKEN cDNA 1110028F18 gene ncRNA common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-2 chr15 71850232 71850462 + 0.677583764578261 NA intron (NM_027174, intron 46 of 63) intron (NM_027174, intron 46 of 63) -122509 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-3 chr2 3134435 3134931 + 0.677583764578261 NA intron (NM_001347067, intron 1 of 7) B4A|SINE|B4 15998 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-3 chr11 106083765 106084060 + 0.677583764578261 NA promoter-TSS (NM_011947) promoter-TSS (NM_011947) -990 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-6 chr17 26585963 26586466 + 0.677583764578261 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 24702 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-2 chr19 26748204 26748565 + 0.677583764578261 NA promoter-TSS (NM_026003) promoter-TSS (NM_026003) -19 NM_026003 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding unique_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-4 chr6 112864813 112865264 + 0.677583764578261 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 82228 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-6 chr3 87885208 87885534 + 0.677583764578261 NA 5' UTR (NM_033573, exon 1 of 7) 5' UTR (NM_033573, exon 1 of 7) 191 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-6 chr6 106799390 106799920 + 0.677583764578261 NA intron (NM_175357, intron 1 of 10) intron (NM_175357, intron 1 of 10) 432 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-7 chr3 95882517 95883056 + 0.677583764578261 NA promoter-TSS (NM_001033302) promoter-TSS (NM_001033302) -558 NM_001033302 229599 Mm.331218 NM_001033302 ENSMUSG00000038550 Ciart Chrono|Gm129 circadian associated repressor of transcription protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-5 chr17 6007516 6007946 + 0.677583764578261 NA exon (NM_001290698, exon 1 of 20) exon (NM_001290698, exon 1 of 20) 151 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding unique_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-3 chr3 158272226 158272699 + 0.677583764578261 NA intron (NM_001081358, intron 8 of 27) intron (NM_001081358, intron 8 of 27) 235780 NM_001289524 67144 Mm.358704 NM_024194 ENSMUSG00000063052 Lrrc40 2610040E16Rik|AI837674 leucine rich repeat containing 40 protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261 chr10 81345892 81346334 + 0.677583764578261 NA TTS (NM_010440) TTS (NM_010440) -2847 NM_148951 209047 Mm.218755 NM_148951 ENSMUSG00000034872 Gipc3 Ahl5|Rgs19ip3 GIPC PDZ domain containing family, member 3 protein-coding common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-4 chr5 36830330 36830657 + 0.677583764578261 NA exon (NM_008550, exon 1 of 19) exon (NM_008550, exon 1 of 19) 156 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding unique_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-5 chr5 57716992 57717495 + 0.677583764578261 NA promoter-TSS (NM_018764) promoter-TSS (NM_018764) 676 NR_015588 319216 Mm.332387 NR_015588 ENSMUSG00000097216 4932441J04Rik - RIKEN cDNA 4932441J04 gene ncRNA common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261 chr11 116843742 116844176 + 0.677583764578261 NA promoter-TSS (NM_033398) promoter-TSS (NM_033398) 444 NM_028865 74319 Mm.429312 NM_028865 ENSMUSG00000090266 Mettl23 1110005A03Rik|1500035B17Rik|4933424L15Rik methyltransferase like 23 protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-4 chr15 11572199 11572664 + 0.677583764578261 NA Intergenic Intergenic -172773 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-4 chr4 93334891 93335244 + 0.677583764578261 NA exon (NM_026954, exon 1 of 1) exon (NM_026954, exon 1 of 1) 444 NM_026954 69136 Mm.171558 NM_026954 ENSMUSG00000054000 Tusc1 2200001D17Rik|TSG-9 tumor suppressor candidate 1 protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-10 chr8 64523950 64524427 + 0.677583764578261 NA Intergenic Lx7|LINE|L1 -9747 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-11 chr9 57937626 57938018 + 0.677583764578261 NA Intergenic Intergenic -2313 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-4 chr12 8923202 8923527 + 0.677583764578261 NA intron (NM_008640, intron 1 of 6) intron (NM_008640, intron 1 of 6) 2057 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-2 chr11 120796085 120796406 + 0.677583764578261 NA 5' UTR (NM_026824, exon 1 of 14) 5' UTR (NM_026824, exon 1 of 14) 150 NM_026824 68730 Mm.180622 NM_026824 ENSMUSG00000025155 Dus1l 1110032N12Rik dihydrouridine synthase 1-like (S. cerevisiae) protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-4 chr2 158140243 158140657 + 0.677583764578261 NA intron (NM_009373, intron 2 of 12) intron (NM_009373, intron 2 of 12) 5942 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-5 chr16 92617045 92617488 + 0.677583764578261 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 80063 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261 chr1 106714496 106714821 + 0.677583764578261 NA promoter-TSS (NM_177410) promoter-TSS (NM_177410) -368 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261-7 chr7 139843093 139843464 + 0.677583764578261 NA intron (NM_177469, intron 3 of 7) intron (NM_177469, intron 3 of 7) 9104 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-10 chr8 94053220 94053801 + 0.677583764578261 NA intron (NM_001093757, intron 4 of 11) ID2|SINE|ID 16312 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-3 chr11 121260434 121260783 + 0.677583764578261 NA intron (NM_001080932, intron 1 of 8) intron (NM_001080932, intron 1 of 8) 621 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding common_peak1_33_19_0.487902762449089_4.56587947611191_0.677583764578261-11 chr9 63701346 63701661 + 0.677583764578261 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 56491 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_33_19_0.487902762449089_4.56587947611191_0.677583764578261 chr1 124488350 124488907 + 0.677583764578261 NA Intergenic Intergenic -443069 NM_199021 269109 Mm.417716 NM_199021 ENSMUSG00000036815 Dpp10 6430601K09Rik|DPP X|Dprp3 dipeptidylpeptidase 10 protein-coding common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-2 chr12 76507818 76508312 + 0.677583764578261 NA Intergenic Intergenic 25147 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-12 chr9 109931187 109931677 + 0.677583764578261 NA promoter-TSS (NM_008633) promoter-TSS (NM_008633) -342 NM_001205331 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding common_peak1_22_28_-0.608072713758073_4.55394463824854_0.677583764578261-7 chr9 58447464 58447741 + 0.677583764578261 NA Intergenic Intergenic -7571 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA unique_peak2_22_28_-0.608072713758073_4.55394463824854_0.677583764578261 chr13 72628942 72629383 + 0.677583764578261 NA promoter-TSS (NR_030701) promoter-TSS (NR_030701) 365 NM_010574 16372 Mm.28888 NM_010574 ENSMUSG00000001504 Irx2 - Iroquois homeobox 2 protein-coding common_peak1_111_75_0.269661621201851_6.38275832404451_0.677463460071002 chr17 55891464 55892376 + 0.677463460071002 NA promoter-TSS (NM_145490) promoter-TSS (NM_145490) -173 NM_001360136 224893 Mm.294853 NM_145490 ENSMUSG00000003198 Zfp959 - zinc finger protein 959 protein-coding common_peak1_90_92_-0.319016566652032_6.37965052778202_0.677463460071002 chr4 135353508 135354708 + 0.677463460071002 NA promoter-TSS (NM_001130477) promoter-TSS (NM_001130477) -894 NM_001130477 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak2_90_92_-0.319016566652032_6.37965052778202_0.677463460071002 chr7 64249967 64251061 + 0.677463460071002 NA promoter-TSS (NR_105844) promoter-TSS (NR_105844) -415 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA common_peak2_91_92_-0.30336048888502_6.38747856666552_0.677463460071002 chr17 79894777 79895962 + 0.677463460071002 NA intron (NM_001357752, intron 1 of 13) CpG 754 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak2_91_92_-0.30336048888502_6.38747856666552_0.677463460071002-2 chr7 28808382 28809476 + 0.677463460071002 NA Intergenic CpG -1961 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak2_112_75_0.282395188216666_6.38912510755192_0.677463460071002 chr14 66257995 66258881 + 0.677463460071002 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 22614 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_112_75_0.282395188216666_6.38912510755192_0.677463460071002 chr4 116685219 116686664 + 0.677463460071002 NA promoter-TSS (NR_040442) promoter-TSS (NR_040442) 81 NR_040442 100502959 Mm.395400 NR_040442 AV051173 - expressed sequence AV051173 ncRNA common_peak1_99_66_0.289154692121292_6.21066653651842_0.677371116707613-4 chr2 32450509 32451437 + 0.677371116707613 NA 5' UTR (NM_194335, exon 1 of 2) 5' UTR (NM_194335, exon 1 of 2) 497 NM_001164357 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_99_66_0.289154692121292_6.21066653651842_0.677371116707613 chr15 77920407 77921403 + 0.677371116707613 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 8089 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_99_66_0.289154692121292_6.21066653651842_0.677371116707613-2 chr18 80149841 80150909 + 0.677371116707613 NA intron (NM_175028, intron 1 of 3) intron (NM_175028, intron 1 of 3) 1107 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding common_peak2_80_82_-0.321656978219311_6.21421094223727_0.677371116707613 chr4 148513019 148514323 + 0.677371116707613 NA intron (NM_020009, intron 29 of 57) intron (NM_020009, intron 29 of 57) -13209 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak1_79_82_-0.339452447521738_6.20531320758606_0.677371116707613 chr4 139581423 139582827 + 0.677371116707613 NA intron (NM_001205173, intron 1 of 8) B1F1|SINE|Alu 7405 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_99_66_0.289154692121292_6.21066653651842_0.677371116707613 chr8 85080287 85081235 + 0.677371116707613 NA promoter-TSS (NM_026399) promoter-TSS (NM_026399) -15 NM_026399 67836 Mm.334680 NM_026399 ENSMUSG00000005150 Wdr83 1500041N16Rik|Morg1 WD repeat domain containing 83 protein-coding common_peak1_99_66_0.289154692121292_6.21066653651842_0.677371116707613-3 chr19 4810560 4811577 + 0.677371116707613 NA intron (NM_019869, intron 1 of 2) intron (NM_019869, intron 1 of 2) 566 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-10 chr9 53247549 53248071 + 0.677299098039755 NA intron (NM_029936, intron 1 of 17) CpG 302 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-2 chr1 134062767 134063097 + 0.677299098039755 NA Intergenic Intergenic 16223 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755 chr1 64930134 64930529 + 0.677299098039755 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 26493 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-6 chr15 88864233 88864797 + 0.677299098039755 NA intron (NM_145478, intron 5 of 5) intron (NM_145478, intron 5 of 5) 2321 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-3 chr10 56378004 56378598 + 0.677299098039755 NA intron (NM_010288, intron 1 of 1) intron (NM_010288, intron 1 of 1) 1001 NM_010288 14609 Mm.378921 NM_010288 ENSMUSG00000050953 Gja1 AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43 gap junction protein, alpha 1 protein-coding unique_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755 chr3 107823720 107824337 + 0.677299098039755 NA Intergenic Intergenic -53202 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-2 chr7 130143738 130144214 + 0.677299098039755 NA Intergenic Intergenic 122832 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak1_28_34_-0.547315015994456_4.85562550894774_0.677299098039755 chr2 146855904 146856381 + 0.677299098039755 NA intron (NM_001033298, intron 1 of 13) CpG 253 NM_001033298 228730 Mm.292352 NM_001033298 ENSMUSG00000074749 Kiz Gm114|Ncrna00153|Plk1s1 kizuna centrosomal protein protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-4 chr12 111573666 111574223 + 0.677299098039755 NA promoter-TSS (NM_022801) promoter-TSS (NM_022801) 458 NR_045295 100504687 Mm.26072 NR_045295 ENSMUSG00000096995 2810029C07Rik AU017849 RIKEN cDNA 2810029C07 gene ncRNA common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-7 chr19 12002747 12003264 + 0.677299098039755 NA Intergenic Intergenic 33735 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-5 chr13 91461869 91462536 + 0.677299098039755 NA intron (NM_001360776, intron 1 of 15) CpG 1105 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_28_34_-0.547315015994456_4.85562550894774_0.677299098039755 chr13 59941280 59941643 + 0.677299098039755 NA Intergenic Intergenic -88250 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-9 chr8 125343487 125343827 + 0.677299098039755 NA Intergenic Intergenic 149176 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak1_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-2 chr8 27106344 27106749 + 0.677299098039755 NA intron (NM_054044, intron 2 of 18) intron (NM_054044, intron 2 of 18) 20705 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak2_28_34_-0.547315015994456_4.85562550894774_0.677299098039755-8 chr2 180256561 180257105 + 0.677299098039755 NA promoter-TSS (NM_025587) promoter-TSS (NM_025587) -546 NM_025587 66481 Mm.289669 NM_025587 ENSMUSG00000039001 Rps21 1810049N11Rik|2410030A14Rik ribosomal protein S21 protein-coding common_peak1_40_24_0.434158357398958_4.8609353684742_0.677299098039749-3 chr2 33465326 33465934 + 0.677299098039749 NA intron (NM_001355611, intron 1 of 2) intron (NM_001355611, intron 1 of 2) 2902 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak1_40_24_0.434158357398958_4.8609353684742_0.677299098039749-2 chr17 12992791 12993155 + 0.677299098039749 NA promoter-TSS (NM_175394) promoter-TSS (NM_175394) -434 NM_175394 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding common_peak1_40_24_0.434158357398958_4.8609353684742_0.677299098039749 chr12 85050827 85051230 + 0.677299098039749 NA intron (NM_001347421, intron 15 of 19) intron (NM_001347421, intron 15 of 19) 44587 NM_001361239 73422 Mm.311944 NM_175198 ENSMUSG00000042320 Prox2 1700058C01Rik prospero homeobox 2 protein-coding common_peak2_40_24_0.434158357398958_4.8609353684742_0.677299098039749 chr12 100210569 100211000 + 0.677299098039749 NA TTS (NM_009790) TTS (NM_009790) 10640 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1 calmodulin 1 protein-coding common_peak2_40_24_0.434158357398958_4.8609353684742_0.677299098039749-3 chr4 141277720 141278091 + 0.677299098039749 NA promoter-TSS (NR_151527) promoter-TSS (NR_151527) -534 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak1_40_24_0.434158357398958_4.8609353684742_0.677299098039749-5 chr9 64018226 64018567 + 0.677299098039749 NA intron (NM_008542, intron 1 of 3) intron (NM_008542, intron 1 of 3) 3663 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_40_24_0.434158357398958_4.8609353684742_0.677299098039749-2 chr14 57290930 57291313 + 0.677299098039749 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 107362 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak1_40_24_0.434158357398958_4.8609353684742_0.677299098039749 chr3 102671423 102672054 + 0.677299098039749 NA Intergenic Intergenic -63032 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak1_40_24_0.434158357398958_4.8609353684742_0.677299098039749-4 chr4 58552964 58553598 + 0.677299098039749 NA promoter-TSS (NM_172989) promoter-TSS (NM_172989) 12 NM_172989 14745 Mm.4772 NM_010336 ENSMUSG00000038668 Lpar1 AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1 lysophosphatidic acid receptor 1 protein-coding common_peak1_275_197_0.180222324797611_7.71946778247841_0.677298484070096 chr14 31494037 31496207 + 0.677298484070096 NA promoter-TSS (NM_001359850) promoter-TSS (NM_001359850) 43 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak1_142_138_-0.251322519462374_6.99327981299232_0.676992626992234-2 chr6 108446794 108448293 + 0.676992626992234 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -42200 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_142_138_-0.251322519462374_6.99327981299232_0.676992626992234 chr11 49202947 49204219 + 0.676992626992234 NA promoter-TSS (NM_009562) promoter-TSS (NM_009562) 83 NM_009562 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak1_139_95_0.25228353267816_6.71110426706024_0.676620847024165 chr9 110880192 110881503 + 0.676620847024165 NA promoter-TSS (NM_146260) promoter-TSS (NM_146260) 525 NM_001146060 235633 Mm.86338 NM_146228 ENSMUSG00000044037 Als2cl 79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018 ALS2 C-terminal like protein-coding common_peak2_138_95_0.24201455066193_6.70596977605212_0.676620847024165 chr7 45872837 45873990 + 0.676620847024165 NA intron (NM_133950, intron 1 of 4) intron (NM_133950, intron 1 of 4) 573 NM_133950 68137 Mm.298433 NM_133950 ENSMUSG00000002778 Kdelr1 8030486F04Rik|AW215843|Erd2.1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 protein-coding common_peak2_139_95_0.25228353267816_6.71110426706024_0.676620847024165 chr3 151352009 151353173 + 0.676620847024165 NA Intergenic Intergenic -85291 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak1_125_85_0.260050563971493_6.55629003668784_0.675836349268242 chr15 53612920 53614000 + 0.675836349268242 NA TTS (NR_039538) TTS (NR_039538) 819 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_103_103_-0.289011502832468_6.55593396672486_0.675836349268218 chr5 64803339 64804712 + 0.675836349268218 NA intron (NM_008453, intron 1 of 5) CpG 502 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_202_142_0.209645754599763_7.26469421407827_0.675553090698566 chr5 33335552 33337302 + 0.675553090698566 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 855 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak2_276_198_0.178135222772267_7.72569223192978_0.675517008724774 chr14 31494011 31496172 + 0.675517008724774 NA promoter-TSS (NM_001359850) promoter-TSS (NM_001359850) 12 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak2_77_50_0.326893455137829_5.83587206954041_0.675315000769687-3 chr9 95511154 95511831 + 0.675315000769687 NA intron (NM_001357977, intron 1 of 25) CpG 504 NM_001357975 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak2_77_50_0.326893455137829_5.83587206954041_0.675315000769687-2 chr6 67102128 67103143 + 0.675315000769687 NA Intergenic Intergenic -65228 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding common_peak2_77_50_0.326893455137829_5.83587206954041_0.675315000769687 chr3 144201448 144202343 + 0.675315000769687 NA exon (NM_010723, exon 2 of 5) exon (NM_010723, exon 2 of 5) 437 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_77_50_0.326893455137829_5.83587206954041_0.675315000769687-2 chr17 71616248 71616965 + 0.675315000769687 NA intron (NM_175639, intron 1 of 17) CpG 391 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding common_peak1_77_50_0.326893455137829_5.83587206954041_0.675315000769687 chr16 17927492 17928510 + 0.675315000769687 NA exon (NM_153150, exon 1 of 9) exon (NM_153150, exon 1 of 9) 218 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_60_64_-0.375211743725578_5.83476194116566_0.675315000769674 chr11 101278239 101279006 + 0.675315000769674 NA promoter-TSS (NM_026562) promoter-TSS (NM_026562) 326 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding common_peak2_60_64_-0.375211743725578_5.83476194116566_0.675315000769674-3 chr9 53537027 53538089 + 0.675315000769674 NA promoter-TSS (NM_007499) promoter-TSS (NM_007499) 511 NM_001081152 244879 Mm.116713 NM_001081152 ENSMUSG00000033054 Npat 6820401K01|AI427561|BB112559 nuclear protein in the AT region protein-coding common_peak2_60_64_-0.375211743725578_5.83476194116566_0.675315000769674-2 chr2 117596340 117597703 + 0.675315000769674 NA Intergenic Intergenic 215781 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_88_58_0.305664177038086_6.03547513788088_0.674812112184059 chr5 34761697 34762539 + 0.674812112184059 NA intron (NM_010414, intron 1 of 66) GC_rich|Low_complexity|Low_complexity 378 NM_010414 15194 Mm.209071 NM_010414 ENSMUSG00000029104 Htt AI256365|C430023I11Rik|Hd|Hdh|IT15 huntingtin protein-coding common_peak2_70_73_-0.344832623922219_6.03703705366784_0.674812112184059 chr7 51339111 51339859 + 0.674812112184059 NA Intergenic Intergenic -171544 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak1_88_58_0.305664177038086_6.03547513788088_0.674812112184059 chr10 111506594 111507289 + 0.674812112184059 NA exon (NM_009344, exon 1 of 2) exon (NM_009344, exon 1 of 2) 655 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_88_58_0.305664177038086_6.03547513788088_0.674812112184059-2 chr15 81189032 81189726 + 0.674812112184059 NA intron (NM_001082536, intron 1 of 13) intron (NM_001082536, intron 1 of 13) 1378 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak1_70_73_-0.344832623922219_6.03703705366784_0.674812112184059 chr1 88473749 88474524 + 0.674812112184059 NA Intergenic Intergenic 35930 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding common_peak1_43_48_-0.435534441518148_5.39694262335613_0.674559023890888-2 chr15 5513415 5513980 + 0.674559023890888 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 17379 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888-5 chr4 99193977 99194558 + 0.674559023890888 NA 5' UTR (NM_001145967, exon 1 of 11) 5' UTR (NM_001145967, exon 1 of 11) 120 NM_001145967 242557 Mm.241663 NM_175029 ENSMUSG00000028550 Atg4c Apg4-C|Apg4c|Atg4cl|Autl1 autophagy related 4C, cysteine peptidase protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-4 chr12 80217790 80218692 + 0.674559023890888 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 42130 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_43_48_-0.435534441518148_5.39694262335613_0.674559023890888-4 chr13 42346011 42346914 + 0.674559023890888 NA Intergenic Intergenic 44986 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_43_48_-0.435534441518148_5.39694262335613_0.674559023890888-3 chr17 80785753 80786305 + 0.674559023890888 NA Intergenic GA-rich|Low_complexity|Low_complexity -58004 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888-2 chr8 125569007 125569643 + 0.674559023890888 NA intron (NM_001357372, intron 1 of 21) CpG 538 NM_001357372 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888-3 chr14 37134519 37135122 + 0.674559023890888 NA 5' UTR (NM_001359902, exon 1 of 9) 5' UTR (NM_001359902, exon 1 of 9) 319 NM_001199122 66092 Mm.182912 NM_078478 ENSMUSG00000041028 Ghitm 1010001P14Rik|C77840|MICS1|PTD010|Tmbim5 growth hormone inducible transmembrane protein protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-3 chr11 116616339 116617094 + 0.674559023890888 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 7536 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888-6 chr4 147940832 147941381 + 0.674559023890888 NA exon (NM_029841, exon 1 of 3) exon (NM_029841, exon 1 of 3) 211 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding common_peak1_43_48_-0.435534441518148_5.39694262335613_0.674559023890888 chr12 79600087 79600419 + 0.674559023890888 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 302902 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888-3 chr4 141663290 141663918 + 0.674559023890888 NA intron (NM_001347237, intron 1 of 18) CpG 511 NM_001347237 69582 Mm.33220 NM_001033150 ENSMUSG00000028917 Plekhm2 2310034J19Rik|AI854247|mKIAA0842 pleckstrin homology domain containing, family M (with RUN domain) member 2 protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-2 chr10 42275735 42276677 + 0.674559023890888 NA intron (NM_019740, intron 1 of 3) CpG-1005 536 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding unique_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888 chr11 50325955 50326624 + 0.674559023890888 NA promoter-TSS (NM_007597) promoter-TSS (NM_007597) -616 NM_001110500 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-6 chr4 82399846 82400957 + 0.674559023890888 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 105378 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_43_48_-0.435534441518148_5.39694262335613_0.674559023890888-5 chr15 83165980 83166615 + 0.674559023890888 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 5911 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888 chr10 97061599 97062012 + 0.674559023890888 NA TTS (NR_045358) TTS (NR_045358) 26037 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_43_48_-0.435534441518148_5.39694262335613_0.674559023890888 chr11 33513137 33513847 + 0.674559023890888 NA intron (NR_110973, intron 1 of 28) CpG 254 NR_110973 66011 Mm.383775 NM_023146 ENSMUSG00000040594 Ranbp17 - RAN binding protein 17 protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-8 chr7 43312453 43313016 + 0.674559023890888 NA intron (NM_001357812, intron 1 of 4) CpG 566 NM_001357812 69930 Mm.45367 NM_027264 ENSMUSG00000012640 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 protein-coding common_peak2_58_36_0.38994771969373_5.40442722547581_0.674559023890888-3 chr9 14276442 14276973 + 0.674559023890888 NA intron (NM_030261, intron 1 of 9) CpG 406 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888-7 chr9 65009900 65010687 + 0.674559023890888 NA intron (NM_021345, intron 2 of 10) intron (NM_021345, intron 2 of 10) 11424 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-7 chr7 24082034 24082574 + 0.674559023890888 NA intron (NM_001289637, intron 1 of 3) CpG 407 NM_001289637 210135 Mm.32254 NM_172483 ENSMUSG00000057101 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 protein-coding common_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888-5 chr5 140517105 140517603 + 0.674559023890888 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 11745 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888-4 chr15 62501314 62502108 + 0.674559023890888 NA Intergenic Intergenic -282260 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_43_48_-0.435534441518148_5.39694262335613_0.674559023890888-3 chr12 99356186 99356677 + 0.674559023890888 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 93643 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_58_36_0.38994771969373_5.40442722547581_0.674559023890888-2 chr5 35686469 35687053 + 0.674559023890888 NA Intergenic Intergenic -6981 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888 chr12 104067383 104068101 + 0.674559023890888 NA Intergenic Intergenic -10217 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888-4 chr5 115559490 115559973 + 0.674559023890888 NA intron (NM_007475, intron 1 of 6) CpG 264 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_57_36_0.365459655748317_5.39218319350311_0.674559023890888-2 chr11 54214933 54215516 + 0.674559023890888 NA Intergenic Intergenic -1936 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888 chr1 131138977 131139781 + 0.674559023890888 NA Intergenic Intergenic -1145 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_58_36_0.38994771969373_5.40442722547581_0.674559023890888-5 chr4 59239625 59240657 + 0.674559023890888 NA Intergenic Intergenic -19910 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak1_57_36_0.365459655748317_5.39218319350311_0.674559023890888-2 chr4 127334733 127335325 + 0.674559023890888 NA Intergenic Intergenic -4193 NM_001160012 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak2_43_48_-0.435534441518148_5.39694262335613_0.674559023890888-2 chr12 79600087 79600399 + 0.674559023890888 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 302892 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_58_36_0.38994771969373_5.40442722547581_0.674559023890888 chr12 44269203 44269786 + 0.674559023890888 NA intron (NM_026164, intron 1 of 9) CpG 340 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding common_peak2_143_139_-0.25168172741875_7.00344215323559_0.674060282606476 chr9 75408805 75410626 + 0.674060282606476 NA promoter-TSS (NM_027418) promoter-TSS (NM_027418) 301 NM_015806 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak2_169_118_0.220560033635898_7.00509778012589_0.674060282606476 chr10 43220357 43221926 + 0.674060282606476 NA promoter-TSS (NM_001168289) promoter-TSS (NM_001168289) -345 NM_027772 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak1_144_139_-0.241768076387064_7.00839897875143_0.674060282606476 chr15 73089799 73091338 + 0.674060282606476 NA exon (NM_053068, exon 1 of 3) exon (NM_053068, exon 1 of 3) 156 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding common_peak1_169_118_0.220560033635898_7.00509778012589_0.674060282606476 chr9 108339058 108340702 + 0.674060282606476 NA exon (NM_001329528, exon 3 of 3) exon (NM_001329528, exon 3 of 3) 800 NM_001329527 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding common_peak1_191_180_-0.210135179357688_7.39477829740436_0.673599597665221 chr18 61555359 61556983 + 0.673599597665221 NA intron (NM_001357498, intron 1 of 10) intron (NM_001357498, intron 1 of 10) 898 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak1_208_195_-0.203466010764041_7.51297683873319_0.673148736401484 chr15 77886513 77888297 + 0.673148736401484 NA Intergenic Intergenic 41589 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_208_195_-0.203466010764041_7.51297683873319_0.673148736401484-2 chr19 5050587 5051701 + 0.673148736401484 NA exon (NM_145495, exon 2 of 10) exon (NM_145495, exon 2 of 10) 336 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak2_174_166_-0.226801360320858_7.27030361231362_0.673124485713216 chr2 116974881 116976148 + 0.673124485713216 NA Intergenic Intergenic 75362 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_203_143_0.206631498975105_7.27324075092987_0.673124485713216 chr8 94385977 94387777 + 0.673124485713216 NA intron (NM_001357205, intron 1 of 7) intron (NM_001357205, intron 1 of 7) 448 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_116_115_-0.277826595790794_6.71906769723218_0.673051025414746 chr7 110613858 110615220 + 0.673051025414746 NA intron (NM_177324, intron 1 of 40) CpG 381 NM_177324 319934 Mm.102970 NM_177324 ENSMUSG00000038371 Sbf2 4833411B01Rik|AA414977|AI317167|B430219L04Rik|Mtmr13|mMTMH1 SET binding factor 2 protein-coding common_peak2_140_96_0.247529083769138_6.7236773840717_0.673051025414746 chr3 117867822 117869428 + 0.673051025414746 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 311 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding common_peak1_117_115_-0.265634889378137_6.7251635504385_0.673051025414746 chr10 77259327 77260608 + 0.673051025414746 NA promoter-TSS (NR_026944) promoter-TSS (NR_026944) 667 NM_030262 80294 Mm.203556 NM_030262 ENSMUSG00000020260 Pofut2 2310011G23Rik|AI256847|BC003494|C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding common_peak2_117_115_-0.265634889378137_6.7251635504385_0.673051025414746 chr8 122376616 122377711 + 0.673051025414746 NA intron (NM_001029993, intron 1 of 18) intron (NM_001029993, intron 1 of 18) 547 NM_001029993 76014 Mm.241489 NM_001029993 ENSMUSG00000017478 Zc3h18 1190001B23Rik|5830416A07Rik|Nhn1 zinc finger CCCH-type containing 18 protein-coding common_peak1_92_93_-0.303303709897401_6.40293699672894_0.672993412022111-2 chr3 105053984 105054913 + 0.672993412022111 NA Intergenic Intergenic -1302 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_92_93_-0.303303709897401_6.40293699672894_0.672993412022111 chr12 27489461 27490833 + 0.672993412022111 NA Intergenic Intergenic -147429 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_113_76_0.276157536504456_6.40486530894713_0.672993412022086-3 chr2 137654093 137655551 + 0.672993412022086 NA Intergenic Intergenic -538302 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_113_76_0.276157536504456_6.40486530894713_0.672993412022086 chr1 170174169 170174806 + 0.672993412022086 NA intron (NM_133806, intron 1 of 10) intron (NM_133806, intron 1 of 10) 477 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_113_76_0.276157536504456_6.40486530894713_0.672993412022086-2 chr15 102325958 102326749 + 0.672993412022086 NA intron (NM_027044, intron 1 of 5) CpG 237 NM_027044 56612 Mm.158264 NM_020031 ENSMUSG00000001289 Pfdn5 1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1 prefoldin 5 protein-coding common_peak2_113_76_0.276157536504456_6.40486530894713_0.672993412022086 chr14 55643091 55643886 + 0.672993412022086 NA promoter-TSS (NM_001360063) promoter-TSS (NM_001360063) -117 NM_001360063 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding common_peak2_264_243_-0.179420342685635_7.84102716622007_0.672972450240136 chr8 25601351 25602884 + 0.672972450240136 NA promoter-TSS (NM_001308482) promoter-TSS (NM_001308482) -167 NM_001001735 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding common_peak2_67_43_0.34334425912591_5.63110374820025_0.672788403510121 chr15 95791027 95791345 + 0.672788403510121 NA intron (NM_175344, intron 1 of 19) CpG 343 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak1_67_43_0.34334425912591_5.63110374820025_0.672788403510121-3 chr5 136198418 136198965 + 0.672788403510121 NA intron (NM_025774, intron 1 of 5) CpG 263 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding common_peak1_67_43_0.34334425912591_5.63110374820025_0.672788403510121 chr1 132347821 132348919 + 0.672788403510121 NA Intergenic Intergenic 19578 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak1_67_43_0.34334425912591_5.63110374820025_0.672788403510121-2 chr15 27406061 27406629 + 0.672788403510121 NA Intergenic Intergenic -60332 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_67_43_0.34334425912591_5.63110374820025_0.672788403510121-5 chr8 110997293 110997760 + 0.672788403510121 NA intron (NM_007916, intron 1 of 11) CpG 297 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak1_67_43_0.34334425912591_5.63110374820025_0.672788403510121-4 chr6 93656547 93657244 + 0.672788403510121 NA Intergenic Intergenic 256068 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak1_67_43_0.34334425912591_5.63110374820025_0.672788403510121 chr7 44973549 44974741 + 0.672788403510121 NA intron (NM_001252470, intron 1 of 18) intron (NM_001252470, intron 1 of 18) 706 NM_001357670 78070 Mm.231465 NM_153679 ENSMUSG00000007783 Cpt1c 6530437J22Rik|9630004I06Rik|CPT I-C|CPT IC|CPT1-B|CPTI-B carnitine palmitoyltransferase 1c protein-coding common_peak2_51_56_-0.414406819282872_5.62568660452331_0.672788403510108 chr11 116167463 116168070 + 0.672788403510108 NA 5' UTR (NM_172571, exon 1 of 31) 5' UTR (NM_172571, exon 1 of 31) 412 NM_172571 217335 Mm.35241 NM_172571 ENSMUSG00000020776 Fbf1 1110033G01Rik|5930413D20|mKIAA1863 Fas (TNFRSF6) binding factor 1 protein-coding common_peak1_51_56_-0.414406819282872_5.62568660452331_0.672788403510108-3 chr6 146932390 146933114 + 0.672788403510108 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 21669 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_51_56_-0.414406819282872_5.62568660452331_0.672788403510108-2 chr2 137719616 137720740 + 0.672788403510108 NA Intergenic Intergenic -536406 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_51_56_-0.414406819282872_5.62568660452331_0.672788403510108 chr1 105432202 105433125 + 0.672788403510108 NA Intergenic MER103C|DNA|hAT-Charlie -75953 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_51_56_-0.414406819282872_5.62568660452331_0.672788403510108-2 chr10 94544848 94545623 + 0.672788403510108 NA intron (NM_172051, intron 1 of 3) MER129|LTR?|LTR? -5637 NM_001359761 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_51_56_-0.414406819282872_5.62568660452331_0.672788403510108-3 chr8 11006374 11007436 + 0.672788403510108 NA promoter-TSS (NR_046017) promoter-TSS (NR_046017) -945 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA common_peak2_154_107_0.228163956569948_6.86896948044844_0.672675120785997 chr9 49922552 49923854 + 0.672675120785997 NA Intergenic Intergenic -123810 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_155_107_0.237376315372612_6.87357565984977_0.672675120785997 chr2 103795889 103796984 + 0.672675120785997 NA intron (NM_001111292, intron 1 of 16) intron (NM_001111292, intron 1 of 16) 642 NM_001111290 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak2_130_127_-0.257937691557609_6.8710311542212_0.672675120785997 chr9 67207400 67209311 + 0.672675120785997 NA Intergenic Intergenic 28371 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak1_130_127_-0.257937691557609_6.8710311542212_0.672675120785997 chr9 13748269 13749929 + 0.672675120785997 NA promoter-TSS (NM_023858) promoter-TSS (NM_023858) -82 NR_024025 77116 Mm.210405 NM_023858 ENSMUSG00000031918 Mtmr2 6030445P13Rik myotubularin related protein 2 protein-coding common_peak1_49_30_0.408102551765434_5.15824758626959_0.67259269585133-2 chr10 128778767 128779429 + 0.67259269585133 NA Intergenic Intergenic -11812 NM_001164197 58223 Mm.131266 NM_021412 ENSMUSG00000025355 Mmp19 - matrix metallopeptidase 19 protein-coding common_peak1_49_30_0.408102551765434_5.15824758626959_0.67259269585133-3 chr11 119677151 119678116 + 0.67259269585133 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 74728 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_49_30_0.408102551765434_5.15824758626959_0.67259269585133-4 chr2 32879876 32880274 + 0.67259269585133 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 3941 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_49_30_0.408102551765434_5.15824758626959_0.67259269585133-4 chr13 38449674 38450399 + 0.67259269585133 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 11757 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA common_peak1_49_30_0.408102551765434_5.15824758626959_0.67259269585133-5 chr15 78428806 78429363 + 0.67259269585133 NA intron (NM_001289671, intron 1 of 7) intron (NM_001289671, intron 1 of 7) 520 NR_110357 72844 Mm.390816 NM_001081367 ENSMUSG00000033287 Kctd17 2900008M13Rik|AA414907|AW742389|N28155 potassium channel tetramerisation domain containing 17 protein-coding common_peak1_49_30_0.408102551765434_5.15824758626959_0.67259269585133 chr1 150145366 150146248 + 0.67259269585133 NA Intergenic Lx5|LINE|L1 19141 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA common_peak1_49_30_0.408102551765434_5.15824758626959_0.67259269585133-6 chr3 138742333 138742751 + 0.67259269585133 NA non-coding (NR_121195, exon 1 of 8) non-coding (NR_121195, exon 1 of 8) 334 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak2_49_30_0.408102551765434_5.15824758626959_0.67259269585133-6 chr4 152361585 152362224 + 0.67259269585133 NA intron (NM_001081376, intron 9 of 41) intron (NM_001081376, intron 9 of 41) 23253 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding common_peak2_49_30_0.408102551765434_5.15824758626959_0.67259269585133 chr10 128778877 128779455 + 0.67259269585133 NA Intergenic Intergenic -11744 NM_001164197 58223 Mm.131266 NM_021412 ENSMUSG00000025355 Mmp19 - matrix metallopeptidase 19 protein-coding common_peak2_49_30_0.408102551765434_5.15824758626959_0.67259269585133-2 chr14 79481770 79482112 + 0.67259269585133 NA promoter-TSS (NM_018765) promoter-TSS (NM_018765) -673 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding common_peak2_49_30_0.408102551765434_5.15824758626959_0.67259269585133-5 chr3 80056352 80056917 + 0.67259269585133 NA Intergenic Intergenic 170704 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_49_30_0.408102551765434_5.15824758626959_0.67259269585133-3 chr18 36516025 36516530 + 0.67259269585133 NA promoter-TSS (NM_010415) promoter-TSS (NM_010415) -472 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-5 chr3 84480039 84480522 + 0.672592695851323 NA promoter-TSS (NM_001205355) promoter-TSS (NM_001205355) 159 NM_001033301 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323 chr9 70231727 70232574 + 0.672592695851323 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 24800 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-2 chr10 80677525 80677867 + 0.672592695851323 NA Intergenic Intergenic -1403 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-10 chr9 71215433 71215959 + 0.672592695851323 NA promoter-TSS (NM_009022) promoter-TSS (NM_009022) -93 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-7 chr2 38535296 38535803 + 0.672592695851323 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 23673 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-6 chr4 155869609 155870235 + 0.672592695851323 NA promoter-TSS (NM_024472) promoter-TSS (NM_024472) 355 NM_028020 71957 Mm.475640 NM_028020 ENSMUSG00000029034 Ints11 2410006F12Rik|AU044035|Cpsf3l integrator complex subunit 11 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-3 chr12 110888425 110888871 + 0.672592695851323 NA promoter-TSS (NM_001081057) promoter-TSS (NM_001081057) 497 NM_027223 67236 Mm.287157 NM_026048 ENSMUSG00000021276 Cinp 1810047K05Rik|2810452K22Rik cyclin-dependent kinase 2 interacting protein protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323 chr10 94688787 94689353 + 0.672592695851323 NA promoter-TSS (NR_015524) promoter-TSS (NR_015524) 280 NM_029852 77048 Mm.296971 NM_029852 ENSMUSG00000020024 Cep83 2600001G24Rik|4921537D05Rik|5730513H21Rik|Ccdc41 centrosomal protein 83 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-6 chr19 8704898 8705409 + 0.672592695851323 NA Intergenic Intergenic 8744 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-8 chr8 11009135 11009455 + 0.672592695851323 NA promoter-TSS (NM_001081212) promoter-TSS (NM_001081212) -865 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-9 chr8 60756933 60757444 + 0.672592695851323 NA Intergenic Intergenic 101631 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-4 chr13 21402294 21402919 + 0.672592695851323 NA intron (NM_001145778, intron 1 of 5) CpG 149 NM_001145778 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-3 chr18 56756059 56756606 + 0.672592695851323 NA Intergenic Intergenic 48519 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-8 chr7 130653995 130654504 + 0.672592695851323 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -38307 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-7 chr7 29953533 29954066 + 0.672592695851323 NA intron (NM_178384, intron 1 of 5) CpG 266 NM_178384 72723 Mm.371648 NM_178384 ENSMUSG00000059975 Zfp74 2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77|zfp-74 zinc finger protein 74 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-2 chr11 115513274 115514270 + 0.672592695851323 NA intron (NM_008258, intron 1 of 4) CpG 621 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Jpt1 Hn1 Jupiter microtubule associated homolog 1 protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-4 chr2 121449995 121450746 + 0.672592695851323 NA TTS (NM_001025371) TTS (NM_001025371) 1172 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak2_35_41_-0.500606174106056_5.14201433572573_0.672592695851323-5 chr15 77861335 77861766 + 0.672592695851323 NA Intergenic Intergenic -19375 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_35_41_-0.500606174106056_5.14201433572573_0.672592695851323 chr1 138559260 138559849 + 0.672592695851323 NA intron (NM_021605, intron 2 of 9) intron (NM_021605, intron 2 of 9) 60203 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_81_83_-0.321357855178323_6.2316384951896_0.672333935078526 chr6 146958695 146959676 + 0.672333935078526 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -4764 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak1_100_67_0.282035058007074_6.22848037025388_0.672333935078526 chr13 74639583 74640306 + 0.672333935078526 NA promoter-TSS (NM_030711) promoter-TSS (NM_030711) 91 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak1_101_67_0.296148638740322_6.2355371606205_0.672333935078526 chr7 80827762 80828995 + 0.672333935078526 NA Intergenic B4A|SINE|B4 -25047 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_100_67_0.282035058007074_6.22848037025388_0.672333935078526 chr2 18766746 18767608 + 0.672333935078526 NA Intergenic CpG -6315 NR_126079 100041479 Mm.393659 NR_126079 ENSMUSG00000092353 Gm3363 - predicted gene 3363 ncRNA common_peak1_100_67_0.282035058007074_6.22848037025388_0.672333935078526-2 chr4 34550624 34551918 + 0.672333935078526 NA exon (NM_001007589, exon 1 of 5) exon (NM_001007589, exon 1 of 5) 656 NM_001007589 433693 Mm.389532 NM_026019 ENSMUSG00000028291 Akirin2 2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2 akirin 2 protein-coding common_peak2_81_83_-0.321357855178323_6.2316384951896_0.672333935078526 chr15 9140548 9141184 + 0.672333935078526 NA promoter-TSS (NM_013787) promoter-TSS (NM_013787) 296 NM_177178 320506 Mm.259886 NM_177178 ENSMUSG00000039704 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 protein-coding common_peak2_100_67_0.282035058007074_6.22848037025388_0.672333935078526-2 chr6 39557265 39558221 + 0.672333935078526 NA promoter-TSS (NM_172477) promoter-TSS (NM_172477) 91 NM_172477 209773 Mm.440021 NM_172477 ENSMUSG00000038456 Dennd2a B930096L08Rik|C130031G22|mKIAA1277 DENN/MADD domain containing 2A protein-coding common_peak1_126_86_0.254696125725188_6.57029155871132_0.671879084802823 chr10 111516612 111517504 + 0.671879084802823 NA Intergenic Intergenic 10772 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak2_21_11_0.601267881449148_3.88559644144573_0.671582559449692-2 chr11 96299128 96299337 + 0.671582559449692 NA exon (NM_008269, exon 1 of 2) exon (NM_008269, exon 1 of 2) 158 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-3 chr1 153737243 153737486 + 0.671582559449692 NA intron (NR_046171, intron 1 of 2) intron (NR_046171, intron 1 of 2) 465 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692 chr1 192073971 192074391 + 0.671582559449692 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 18418 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-3 chr10 67747622 67747886 + 0.671582559449692 NA Intergenic Intergenic 164908 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692 chr1 20654139 20654450 + 0.671582559449692 NA Intergenic Intergenic -15588 NR_131249 105661730 Mm.137893 NR_131249 ENSMUSG00000099906 Lincmd1 Linc-md1 long intergenic non-protein coding RNA of muscle differentiation 1 ncRNA unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-21 chr5 111203547 111203936 + 0.671582559449692 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -126956 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-30 chr8 64620031 64620235 + 0.671582559449692 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 72976 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-23 chr7 141009417 141009673 + 0.671582559449692 NA TTS (NM_025378) TTS (NM_025378) 1199 NM_025378 66141 Mm.141021 NM_025378 ENSMUSG00000025492 Ifitm3 1110004C05Rik|Cd225|Cdw217|DSPA2b|Fgls|IP15|mil-1 interferon induced transmembrane protein 3 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-16 chr17 71191628 71192050 + 0.671582559449692 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) 7861 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-15 chr7 35080938 35081187 + 0.671582559449692 NA Intergenic Intergenic -24496 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-11 chr18 80464021 80464297 + 0.671582559449692 NA intron (NM_026295, intron 1 of 12) intron (NM_026295, intron 1 of 12) 5508 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-19 chr5 64282202 64282424 + 0.671582559449692 NA intron (NM_001289514, intron 10 of 18) intron (NM_001289514, intron 10 of 18) 51956 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-8 chr12 27919105 27919599 + 0.671582559449692 NA Intergenic Intergenic -576634 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-12 chr19 15924032 15924289 + 0.671582559449692 NA intron (NM_177420, intron 1 of 8) intron (NM_177420, intron 1 of 8) 462 NM_001205339 107272 Mm.289936 NM_177420 ENSMUSG00000024640 Psat1 D8Ertd814e|EPIP|PSA|Psat phosphoserine aminotransferase 1 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-6 chr16 92164265 92164615 + 0.671582559449692 NA Intergenic Intergenic 106104 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak1_12_18_-0.815334359415227_3.84026033373597_0.671582559449692 chr16 91010754 91010983 + 0.671582559449692 NA promoter-TSS (NR_028368) promoter-TSS (NR_028368) 227 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-2 chr1 106629126 106629369 + 0.671582559449692 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -82616 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-6 chr13 49272183 49272387 + 0.671582559449692 NA intron (NM_015759, intron 14 of 17) intron (NM_015759, intron 14 of 17) -23579 NM_028340 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-19 chr3 21817004 21817304 + 0.671582559449692 NA Intergenic Intergenic -259498 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-26 chr6 113098850 113099368 + 0.671582559449692 NA intron (NM_028385, intron 1 of 21) intron (NM_028385, intron 1 of 21) -5826 NM_173005 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-5 chr10 17586001 17586265 + 0.671582559449692 NA Intergenic Intergenic -137095 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-27 chr7 19024805 19025050 + 0.671582559449692 NA intron (NM_001360713, intron 1 of 22) intron (NM_001360713, intron 1 of 22) 550 NM_026605 68188 Mm.130902 NM_026605 ENSMUSG00000023118 Sympk 1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM symplekin protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-12 chr3 8999415 8999768 + 0.671582559449692 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 4613 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak2_21_11_0.601267881449148_3.88559644144573_0.671582559449692 chr10 99201176 99201497 + 0.671582559449692 NA Intergenic Intergenic -61895 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-16 chr3 94561837 94562309 + 0.671582559449692 NA intron (NM_001082484, intron 1 of 11) intron (NM_001082484, intron 1 of 11) 20643 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-3 chr11 101733037 101733228 + 0.671582559449692 NA exon (NM_144831, exon 1 of 23) exon (NM_144831, exon 1 of 23) 176 NM_144831 217207 Mm.28186 NM_144831 ENSMUSG00000034931 Dhx8 Ddx8|mDEAH6|mKIAA4096 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-7 chr11 100415338 100415655 + 0.671582559449692 NA promoter-TSS (NM_176830) promoter-TSS (NM_176830) -198 NM_010221 14230 Mm.3894 NM_010221 ENSMUSG00000001555 Fkbp10 AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp FK506 binding protein 10 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-18 chr2 30618713 30618930 + 0.671582559449692 NA Intergenic Intergenic 23777 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-10 chr19 28647522 28647957 + 0.671582559449692 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -30485 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-15 chr5 47921055 47921274 + 0.671582559449692 NA Intergenic Intergenic -61991 NR_111900 20563 Mm.289739 NM_178804 ENSMUSG00000031558 Slit2 Drad-1|E030015M03Rik|E130320P19Rik|Slil3|b2b1200.1Clo|mKIAA4141|slit-2 slit guidance ligand 2 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-21 chr5 113539885 113540241 + 0.671582559449692 NA Intergenic Intergenic -10357 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-11 chr2 27745719 27746024 + 0.671582559449692 NA intron (NM_001290481, intron 4 of 9) intron (NM_001290481, intron 4 of 9) 35288 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-28 chr9 121285552 121285821 + 0.671582559449692 NA Intergenic Intergenic -8514 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-4 chr13 21809605 21809942 + 0.671582559449692 NA promoter-TSS (NM_001177544) promoter-TSS (NM_001177544) 426 NM_001313878 665622 Mm.471247 NM_001110555 ENSMUSG00000069303 Hist1h2br Gm11277 histone cluster 1 H2br protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-4 chr1 184059352 184059568 + 0.671582559449692 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 25079 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-32 chr8 126523381 126523611 + 0.671582559449692 NA Intergenic Intergenic -48431 NM_001159907 212728 Mm.482479 NM_001159907 ENSMUSG00000090290 Tarbp1 Gm17296|Gm179 TAR RNA binding protein 1 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-24 chr6 17212920 17213222 + 0.671582559449692 NA Intergenic Intergenic 14964 NR_102304 319682 Mm.136046 NR_102304 ENSMUSG00000085171 D830026I12Rik - RIKEN cDNA D830026I12 gene ncRNA unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-13 chr16 24493905 24494224 + 0.671582559449692 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -35250 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_21_11_0.601267881449148_3.88559644144573_0.671582559449692-3 chr11 116329273 116329549 + 0.671582559449692 NA Intergenic MER5B|DNA|hAT-Charlie 5943 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-5 chr11 70195853 70196074 + 0.671582559449692 NA Intergenic Intergenic -17947 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-18 chr5 26819839 26820247 + 0.671582559449692 NA intron (NM_010075, intron 1 of 25) intron (NM_010075, intron 1 of 25) 2686 NM_010075 13483 Mm.42078 NM_010075 ENSMUSG00000061576 Dpp6 B930011P16Rik|D5Buc3|D5Buc4|D5Buc5|DPP VI|Dpp-6|Gm1377|In(5)6H-p|Peplb|Rw dipeptidylpeptidase 6 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-16 chr8 34618313 34618692 + 0.671582559449692 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 21814 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-5 chr14 18204642 18205172 + 0.671582559449692 NA 3' UTR (NM_011584, exon 8 of 8) 3' UTR (NM_011584, exon 8 of 8) 34199 NM_011584 353187 Mm.26587 NM_011584 ENSMUSG00000021775 Nr1d2 RVR|Rev-erb nuclear receptor subfamily 1, group D, member 2 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-22 chr7 45866266 45866491 + 0.671582559449692 NA exon (NM_008172, exon 1 of 12) exon (NM_008172, exon 1 of 12) 303 NM_008172 14814 Mm.322594 NM_008172 ENSMUSG00000002771 Grin2d GluN2D|NMDAR2D|NR2D glutamate receptor, ionotropic, NMDA2D (epsilon 4) protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-29 chrX 109141082 109141606 + 0.671582559449692 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 45937 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-9 chr19 18346100 18346428 + 0.671582559449692 NA Intergenic Intergenic 285549 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-4 chr10 94048132 94048372 + 0.671582559449692 NA intron (NM_053072, intron 2 of 20) intron (NM_053072, intron 2 of 20) 12251 NM_053072 13998 Mm.269596 NM_053072 ENSMUSG00000020021 Fgd6 AA123052|Etohd4|ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-2 chr1 125701116 125701399 + 0.671582559449692 NA intron (NM_027677, intron 1 of 1) intron (NM_027677, intron 1 of 1) 24261 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-24 chr8 7710076 7710517 + 0.671582559449692 NA Intergenic Intergenic 950477 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-13 chr2 150749299 150749503 + 0.671582559449692 NA intron (NM_001355068, intron 1 of 13) CpG 320 NM_172117 12497 Mm.275524 NM_172117 ENSMUSG00000033068 Entpd6 2700026H11Rik|Cd39l2|NTPDase-6 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-9 chr12 108493962 108494207 + 0.671582559449692 NA intron (NM_001043335, intron 4 of 21) intron (NM_001043335, intron 4 of 21) -60636 NM_001163394 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774|b2b2600Clo Ena-vasodilator stimulated phosphoprotein protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-22 chr5 140609695 140609991 + 0.671582559449692 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 2502 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-12 chr5 32140243 32140473 + 0.671582559449692 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 3886 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-12 chr16 18394790 18395035 + 0.671582559449692 NA intron (NM_001272031, intron 1 of 16) intron (NM_001272031, intron 1 of 16) 2349 NM_001272032 11877 Mm.293599 NM_033474 ENSMUSG00000000325 Arvcf - armadillo repeat gene deleted in velocardiofacial syndrome protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-6 chr11 76469312 76469637 + 0.671582559449692 NA intron (NM_001346670, intron 4 of 21) intron (NM_001346670, intron 4 of 21) -1009 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-23 chr5 144904622 144904993 + 0.671582559449692 NA intron (NM_001038627, intron 1 of 17) B1_Mur1|SINE|Alu -7991 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-20 chr3 129835785 129836124 + 0.671582559449692 NA promoter-TSS (NM_001329552) promoter-TSS (NM_001329552) -785 NM_001329552 12630 Mm.117180 NM_007686 ENSMUSG00000058952 Cfi - complement component factor i protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-27 chr9 92278646 92279031 + 0.671582559449692 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 3236 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692 chr1 137079743 137080079 + 0.671582559449692 NA Intergenic Intergenic -119463 NM_030676 26424 Mm.16794 NM_030676 ENSMUSG00000026398 Nr5a2 AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B nuclear receptor subfamily 5, group A, member 2 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-10 chr17 17623387 17623700 + 0.671582559449692 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 946 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-7 chr13 67060681 67061083 + 0.671582559449692 NA intron (NM_001166218, intron 1 of 3) intron (NM_001166218, intron 1 of 3) 288 NM_001166218 78251 Mm.297247 NM_001166218 ENSMUSG00000090641 Zfp712 4921504N20Rik|mszf31|mszf89 zinc finger protein 712 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-17 chr4 148508020 148508282 + 0.671582559449692 NA intron (NM_020009, intron 28 of 57) intron (NM_020009, intron 28 of 57) -7689 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-13 chr3 31061596 31061802 + 0.671582559449692 NA Intergenic Intergenic 22733 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-28 chr7 45052941 45053309 + 0.671582559449692 NA promoter-TSS (NM_175022) promoter-TSS (NM_175022) -244 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-7 chr11 94489769 94490166 + 0.671582559449692 NA 3' UTR (NM_027984, exon 10 of 10) 3' UTR (NM_027984, exon 10 of 10) -4657 NM_144827 217116 Mm.156123 NM_144827 ENSMUSG00000020867 Spata20 Tisp78 spermatogenesis associated 20 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-15 chr17 70845285 70845696 + 0.671582559449692 NA intron (NM_001164074, intron 2 of 2) intron (NM_001164074, intron 2 of 2) 1287 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_21_11_0.601267881449148_3.88559644144573_0.671582559449692 chr1 159889199 159889412 + 0.671582559449692 NA exon (NM_022312, exon 14 of 23) exon (NM_022312, exon 14 of 23) -155075 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-2 chr10 19593571 19593854 + 0.671582559449692 NA intron (NM_010511, intron 1 of 6) intron (NM_010511, intron 1 of 6) 1763 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-3 chr10 24473299 24473576 + 0.671582559449692 NA Intergenic Intergenic -122005 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692 chr1 89111450 89111720 + 0.671582559449692 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 41170 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_21_11_0.601267881449148_3.88559644144573_0.671582559449692-2 chr2 68471667 68471984 + 0.671582559449692 NA exon (NM_016866, exon 1 of 18) exon (NM_016866, exon 1 of 18) 156 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-6 chr11 75732453 75732673 + 0.671582559449692 NA promoter-TSS (NM_009536) promoter-TSS (NM_009536) -324 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-7 chr16 92400490 92400758 + 0.671582559449692 NA promoter-TSS (NM_019466) promoter-TSS (NM_019466) -546 NM_019466 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-4 chr10 95123986 95124303 + 0.671582559449692 NA intron (NR_131146, intron 3 of 3) intron (NR_131146, intron 3 of 3) 21681 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-16 chr7 38271871 38272158 + 0.671582559449692 NA promoter-TSS (NM_025390) promoter-TSS (NM_025390) -666 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-26 chr8 91073290 91073629 + 0.671582559449692 NA intron (NM_011250, intron 1 of 21) intron (NM_011250, intron 1 of 21) 3402 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 RB transcriptional corepressor like 2 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-10 chr13 31578131 31578506 + 0.671582559449692 NA intron (NR_029439, intron 3 of 5) intron (NR_029439, intron 3 of 5) 4195 NR_029439 71307 Mm.376184 NR_029439 ENSMUSG00000038408 1700018A04Rik 4930551G20Rik|4933439J11Rik RIKEN cDNA 1700018A04 gene ncRNA unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-29 chr7 98560437 98560840 + 0.671582559449692 NA Intergenic Intergenic 66416 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-8 chr16 90934495 90934727 + 0.671582559449692 NA exon (NM_026502, exon 1 of 7) exon (NM_026502, exon 1 of 7) 238 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-14 chr17 5612070 5612405 + 0.671582559449692 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 119637 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-25 chr8 8499179 8499613 + 0.671582559449692 NA Intergenic Intergenic 161377 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-11 chr17 87828302 87828632 + 0.671582559449692 NA Intergenic Intergenic -30473 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_21_11_0.601267881449148_3.88559644144573_0.671582559449692-4 chr8 64671675 64671906 + 0.671582559449692 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 21319 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-25 chr6 99275933 99276242 + 0.671582559449692 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) -9572 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-9 chr15 95016954 95017215 + 0.671582559449692 NA intron (NM_178789, intron 6 of 7) intron (NM_178789, intron 6 of 7) 132234 NR_015482 100043315 Mm.159041 NR_015482 ENSMUSG00000100603 LOC100043315 - uncharacterized LOC100043315 ncRNA common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-14 chr6 72551230 72551455 + 0.671582559449692 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 1695 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-31 chr8 77485244 77485709 + 0.671582559449692 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -31580 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-8 chr18 60663820 60664062 + 0.671582559449692 NA intron (NR_045401, intron 1 of 2) intron (NR_045401, intron 1 of 2) 531 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-11 chr15 70618707 70619011 + 0.671582559449692 NA Intergenic Intergenic 694626 NR_045071 100503580 Mm.404646 NR_045071 ENSMUSG00000116483 Gm19782 - predicted gene, 19782 ncRNA unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-5 chr11 68538789 68539029 + 0.671582559449692 NA intron (NM_001004435, intron 13 of 19) intron (NM_001004435, intron 13 of 19) -17277 NM_146004 215723 Mm.131205 NM_146004 ENSMUSG00000048329 Mfsd6l - major facilitator superfamily domain containing 6-like protein-coding common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-10 chr17 34188331 34188559 + 0.671582559449692 NA intron (NM_001161730, intron 1 of 11) intron (NM_001161730, intron 1 of 11) 889 NM_013683 21354 Mm.482076 NM_013683 ENSMUSG00000037321 Tap1 ABC17|APT1|Abcb2|Ham-1|Ham1|MTP1|PSF1|RING4|TAP|Tap-1|Y3 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-14 chr3 31093248 31093527 + 0.671582559449692 NA Intergenic Intergenic -1671 NM_001039090 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-15 chr3 37915511 37915979 + 0.671582559449692 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 16932 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-33 chrX 13025900 13026278 + 0.671582559449692 NA Intergenic Intergenic -15926 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-13 chr5 92961416 92961686 + 0.671582559449692 NA intron (NM_001077596, intron 8 of 9) intron (NM_001077596, intron 8 of 9) 63558 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-8 chr14 30951831 30952140 + 0.671582559449692 NA intron (NM_001308328, intron 1 of 13) intron (NM_001308328, intron 1 of 13) 608 NM_011849 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-2 chr11 62551917 62552407 + 0.671582559449692 NA non-coding (NR_002875, exon 2 of 3) non-coding (NR_002875, exon 2 of 3) 431 NM_001313984 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-14 chr3 121634206 121634445 + 0.671582559449692 NA TTS (NR_036456) TTS (NR_036456) 9160 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-9 chr17 14990408 14990681 + 0.671582559449692 NA intron (NM_001123370, intron 11 of 11) intron (NM_001123370, intron 11 of 11) 11680 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding unique_peak1_21_11_0.601267881449148_3.88559644144573_0.671582559449692-20 chr5 66081290 66081852 + 0.671582559449692 NA intron (NM_139065, intron 2 of 6) intron (NM_139065, intron 2 of 6) 16608 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding unique_peak2_12_18_-0.815334359415227_3.84026033373597_0.671582559449692-17 chr18 16808757 16808989 + 0.671582559449692 NA 5' UTR (NM_007664, exon 1 of 16) 5' UTR (NM_007664, exon 1 of 16) 373 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak2_176_167_-0.219135714801872_7.28274956537783_0.67072720317816 chr8 111642849 111644000 + 0.67072720317816 NA promoter-TSS (NM_011742) promoter-TSS (NM_011742) -19 NM_001037665 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak2_280_201_0.177086588450687_7.74675477697714_0.670272445887053 chr15 97830904 97832232 + 0.670272445887053 NA 5' UTR (NM_001204276, exon 1 of 26) 5' UTR (NM_001204276, exon 1 of 26) 199 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-14 chr3 95694204 95694473 + 0.66950227369633 NA Intergenic Intergenic -6421 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-7 chr15 10748251 10748671 + 0.66950227369633 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 33561 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633 chr1 36016587 36016888 + 0.66950227369633 NA Intergenic Intergenic -51663 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-10 chr18 38297383 38297833 + 0.66950227369633 NA intron (NM_001361267, intron 2 of 9) intron (NM_001361267, intron 2 of 9) 803 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-2 chr10 4335373 4335694 + 0.66950227369633 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 51942 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-7 chr17 26611628 26611855 + 0.66950227369633 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 50229 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-13 chr3 21405061 21405626 + 0.66950227369633 NA Intergenic Intergenic -671309 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-16 chr4 84201379 84201926 + 0.66950227369633 NA Intergenic (TAAAA)n|Simple_repeat|Simple_repeat -156773 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-2 chr1 134075521 134075878 + 0.66950227369633 NA 3' UTR (NM_007570, exon 2 of 2) 3' UTR (NM_007570, exon 2 of 2) 3456 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-5 chr12 3779589 3779888 + 0.66950227369633 NA intron (NM_007886, intron 18 of 18) intron (NM_007886, intron 18 of 18) -27242 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-8 chr15 10816592 10816859 + 0.66950227369633 NA Intergenic Intergenic -12326 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-8 chr13 41662719 41662944 + 0.66950227369633 NA Intergenic Intergenic 56615 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-19 chr8 40966244 40966689 + 0.66950227369633 NA intron (NM_026840, intron 2 of 5) intron (NM_026840, intron 2 of 5) 40233 NM_026840 68797 Mm.284246 NM_026840 ENSMUSG00000031595 Pdgfrl 1110039P19Rik|AV013190 platelet-derived growth factor receptor-like protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-23 chrX 151802409 151802976 + 0.66950227369633 NA promoter-TSS (NM_021523) promoter-TSS (NM_021523) -590 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-4 chr12 102594369 102594726 + 0.66950227369633 NA intron (NM_172584, intron 4 of 9) intron (NM_172584, intron 4 of 9) 39606 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-4 chr11 51939716 51939978 + 0.66950227369633 NA Intergenic Intergenic -27784 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-5 chr14 120307347 120307756 + 0.66950227369633 NA intron (NM_001360376, intron 1 of 8) intron (NM_001360376, intron 1 of 8) 1099 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-11 chr17 34000512 34000811 + 0.66950227369633 NA promoter-TSS (NM_001347346) promoter-TSS (NM_001347346) -314 NM_001347346 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-9 chr14 26637168 26637694 + 0.66950227369633 NA promoter-TSS (NM_007479) promoter-TSS (NM_007479) -703 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-3 chr10 111518296 111518680 + 0.66950227369633 NA Intergenic Intergenic 12202 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-21 chr7 127233508 127233841 + 0.66950227369633 NA promoter-TSS (NR_030674) promoter-TSS (NR_030674) -544 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-18 chr5 90706124 90706473 + 0.66950227369633 NA Intergenic Intergenic -53000 NM_009141 20311 Mm.4660 NM_009141 ENSMUSG00000029371 Cxcl5 AMCF-II|Cxcl6|ENA-78|GCP-2|LIX|Scyb5|Scyb6 chemokine (C-X-C motif) ligand 5 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-14 chr3 41286322 41286661 + 0.66950227369633 NA Intergenic Intergenic -203445 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-13 chr2 178455361 178455926 + 0.66950227369633 NA intron (NM_198656, intron 3 of 14) intron (NM_198656, intron 3 of 14) 25128 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-3 chr1 192137459 192137894 + 0.66950227369633 NA intron (NM_001290278, intron 1 of 10) CpG-848 364 NM_001290278 214742 Mm.207457 NM_144814 ENSMUSG00000037395 Rcor3 4921514E24Rik|C730034D20Rik|E130101E15Rik REST corepressor 3 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-17 chr6 91174085 91174783 + 0.66950227369633 NA 3' UTR (NM_144919, exon 10 of 10) 3' UTR (NM_144919, exon 10 of 10) 17619 NM_144919 232232 Mm.206218 NM_144919 ENSMUSG00000034245 Hdac11 - histone deacetylase 11 protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-10 chr17 27135074 27135469 + 0.66950227369633 NA Intergenic Intergenic -1380 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633 chr1 89689238 89689595 + 0.66950227369633 NA intron (NM_001037136, intron 9 of 16) MTE2b|LTR|ERVL-MaLR -5524 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-7 chr12 76552014 76552409 + 0.66950227369633 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -4286 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-4 chr11 76146530 76146991 + 0.66950227369633 NA intron (NM_026664, intron 4 of 21) intron (NM_026664, intron 4 of 21) 32870 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-15 chr4 150569605 150569926 + 0.66950227369633 NA intron (NM_001085492, intron 11 of 22) CpG 82409 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-19 chr7 43562519 43562995 + 0.66950227369633 NA intron (NM_001008549, intron 1 of 4) intron (NM_001008549, intron 1 of 4) 387 NM_001008549 210104 Mm.333821 NM_001008549 ENSMUSG00000056592 Zfp658 - zinc finger protein 658 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-22 chr9 53771671 53772077 + 0.66950227369633 NA exon (NM_028060, exon 1 of 8) exon (NM_028060, exon 1 of 8) 339 NM_028060 72022 Mm.26159 NM_028060 ENSMUSG00000042195 Slc35f2 1500009K05Rik|AU019213 solute carrier family 35, member F2 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-11 chr2 132606213 132606585 + 0.66950227369633 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 8203 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-20 chr7 109616824 109617285 + 0.66950227369633 NA promoter-TSS (NR_037617) promoter-TSS (NR_037617) 93 NM_001001326 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633 chr1 24107681 24107888 + 0.66950227369633 NA Intergenic Intergenic -7443 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-3 chr10 19152610 19152921 + 0.66950227369633 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) 11016 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-12 chr2 26493070 26493492 + 0.66950227369633 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 10541 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-6 chr15 76269454 76269903 + 0.66950227369633 NA intron (NR_045747, intron 1 of 2) intron (NR_045747, intron 1 of 2) 161 NR_045747 100038659 Mm.448549 NR_045747 ENSMUSG00000115946 Mirt2 Gm10872|Gm24562 myocardial infraction associated transcript 2 ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-15 chr3 107763223 107763542 + 0.66950227369633 NA Intergenic Intergenic -2913 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-2 chr1 43158367 43158939 + 0.66950227369633 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 5308 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-16 chr5 34534059 34534428 + 0.66950227369633 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 8459 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-9 chr15 85687211 85687398 + 0.66950227369633 NA Intergenic Intergenic -16469 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-18 chr8 3395040 3395467 + 0.66950227369633 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 2245 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-6 chr14 96519702 96520068 + 0.66950227369633 NA promoter-TSS (NM_053105) promoter-TSS (NM_053105) -851 NM_053105 93688 Mm.308735 NM_053105 ENSMUSG00000022076 Klhl1 mKIAA1490 kelch-like 1 protein-coding common_peak2_27_15_0.531699093791925_4.26584954689596_0.66950227369633-8 chr7 28918177 28918392 + 0.66950227369633 NA intron (NM_021895, intron 3 of 20) intron (NM_021895, intron 3 of 20) 36628 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-12 chr2 158167452 158167654 + 0.66950227369633 NA Intergenic Intergenic -21161 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-5 chr11 107131772 107132191 + 0.66950227369633 NA promoter-TSS (NM_176850) promoter-TSS (NM_176850) -59 NM_001359590 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-17 chr5 73490222 73490621 + 0.66950227369633 NA promoter-TSS (NM_001190733) promoter-TSS (NM_001190733) -605 NM_001190733 100737 Mm.220312 NM_178896 ENSMUSG00000051674 Dcun1d4 AI836376 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein-coding unique_peak1_27_15_0.531699093791925_4.26584954689596_0.66950227369633-6 chr12 35286144 35286572 + 0.66950227369633 NA Intergenic Intergenic -91461 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-2 chr1 88532954 88533201 + 0.669502273696327 NA Intergenic Intergenic -18440 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-4 chr10 87878974 87879444 + 0.669502273696327 NA intron (NM_001111274, intron 2 of 4) intron (NM_001111274, intron 2 of 4) 18098 NM_001111276 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327 chr1 162076611 162077069 + 0.669502273696327 NA intron (NM_001038619, intron 16 of 20) intron (NM_001038619, intron 16 of 20) 71871 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-3 chr16 3872502 3872900 + 0.669502273696327 NA promoter-TSS (NM_001033159) promoter-TSS (NM_001033159) -327 NM_001033159 71063 Mm.379190 NM_001033159 ENSMUSG00000039789 Zfp597 4933407K12Rik|AI462383|AI666357 zinc finger protein 597 protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-8 chr7 141010190 141010591 + 0.669502273696327 NA intron (NM_025378, intron 1 of 1) intron (NM_025378, intron 1 of 1) 354 NM_025378 66141 Mm.141021 NM_025378 ENSMUSG00000025492 Ifitm3 1110004C05Rik|Cd225|Cdw217|DSPA2b|Fgls|IP15|mil-1 interferon induced transmembrane protein 3 protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-7 chr8 23683194 23683453 + 0.669502273696327 NA intron (NM_177086, intron 1 of 6) intron (NM_177086, intron 1 of 6) 13662 NM_177086 320158 Mm.121274 NM_177086 ENSMUSG00000037492 Zmat4 9630048M01Rik zinc finger, matrin type 4 protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327 chr1 16008313 16008525 + 0.669502273696327 NA Intergenic Intergenic 84906 NM_001243238 75799 Mm.78557 NM_001243238 ENSMUSG00000067795 4930444P10Rik - RIKEN cDNA 4930444P10 gene protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-6 chr16 17812382 17812857 + 0.669502273696327 NA Intergenic Intergenic 15337 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-2 chr14 61352219 61352755 + 0.669502273696327 NA intron (NM_026598, intron 1 of 3) intron (NM_026598, intron 1 of 3) 7958 NM_026598 68177 Mm.22758 NM_026598 ENSMUSG00000021928 Ebpl 5730442K12Rik|EBRP emopamil binding protein-like protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-8 chr9 72274680 72274979 + 0.669502273696327 NA promoter-TSS (NM_001311105) promoter-TSS (NM_001311105) -59 NM_146224 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-5 chr7 142456004 142456309 + 0.669502273696327 NA Intergenic Intergenic -4656 NM_001271510 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-5 chr13 23544453 23544772 + 0.669502273696327 NA exon (NM_013548, exon 1 of 1) exon (NM_013548, exon 1 of 1) 560 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327 chr1 40225476 40225794 + 0.669502273696327 NA intron (NM_008362, intron 1 of 10) intron (NM_008362, intron 1 of 10) 555 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-9 chr8 121125372 121125795 + 0.669502273696327 NA Intergenic CpG -2102 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-6 chr2 128126955 128127190 + 0.669502273696327 NA promoter-TSS (NM_001284410) promoter-TSS (NM_001284410) -503 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-8 chr16 90845278 90845553 + 0.669502273696327 NA intron (NM_001316761, intron 1 of 5) intron (NM_001316761, intron 1 of 5) 14556 NM_001316761 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-5 chr19 60464236 60464778 + 0.669502273696327 NA Intergenic Intergenic 3797 NM_201615 226278 Mm.377241 NM_201615 ENSMUSG00000045052 Prlhr Gm339|Gpr10|Gr3|Prrpr prolactin releasing hormone receptor protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-6 chr8 23237437 23237624 + 0.669502273696327 NA 5' UTR (NM_024240, exon 1 of 8) 5' UTR (NM_024240, exon 1 of 8) 138 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-7 chr16 45376122 45376612 + 0.669502273696327 NA Intergenic Intergenic 32686 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-3 chr15 76380652 76380958 + 0.669502273696327 NA intron (NM_175457, intron 1 of 43) CpG 292 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-3 chr10 44268492 44268723 + 0.669502273696327 NA intron (NM_001358596, intron 1 of 6) CpG 268 NM_001358596 11793 Mm.22264 NM_053069 ENSMUSG00000038160 Atg5 2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy autophagy related 5 protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-4 chr16 55814691 55815205 + 0.669502273696327 NA intron (NM_001159395, intron 10 of 12) intron (NM_001159395, intron 10 of 12) 7190 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-4 chr15 102065443 102065661 + 0.669502273696327 NA Intergenic Intergenic -8221 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-2 chr10 28076671 28076920 + 0.669502273696327 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 1975 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-9 chr3 121374988 121375403 + 0.669502273696327 NA Intergenic Intergenic -51346 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-7 chr4 62731788 62732092 + 0.669502273696327 NA Intergenic Intergenic 57966 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_17_23_-0.686196272475207_4.24186436448355_0.669502273696327 chr17 71483396 71483639 + 0.669502273696327 NA Intergenic Intergenic -8174 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak2_17_23_-0.686196272475207_4.24186436448355_0.669502273696327-10 chr6 84270904 84271219 + 0.669502273696327 NA Intergenic Intergenic 152777 NR_046063 100038556 Mm.387783 NR_046063 ENSMUSG00000107797 Gm10445 - predicted gene 10445 ncRNA common_peak2_71_74_-0.34416242139642_6.05673747979767_0.669167117329845 chr10 44003380 44004300 + 0.669167117329845 NA exon (NM_172393, exon 1 of 20) exon (NM_172393, exon 1 of 20) 1006 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding common_peak1_71_74_-0.34416242139642_6.05673747979767_0.669167117329845 chr1 6359456 6360394 + 0.669167117329845 NA intron (NM_001195732, intron 1 of 4) intron (NM_001195732, intron 1 of 4) 594 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak1_71_74_-0.34416242139642_6.05673747979767_0.669167117329845-2 chr1 152821204 152821973 + 0.669167117329845 NA exon (NM_010877, exon 5 of 16) exon (NM_010877, exon 5 of 16) 21435 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak2_71_74_-0.34416242139642_6.05673747979767_0.669167117329845-2 chr5 74194802 74196033 + 0.669167117329845 NA promoter-TSS (NM_026878) promoter-TSS (NM_026878) 91 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding common_peak2_89_59_0.29742257224482_6.05560188173093_0.669167117329832 chr6 34608362 34609512 + 0.669167117329832 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 10433 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_89_59_0.29742257224482_6.05560188173093_0.669167117329832-2 chr7 12921537 12922079 + 0.669167117329832 NA promoter-TSS (NM_009095) promoter-TSS (NM_009095) -503 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_89_59_0.29742257224482_6.05560188173093_0.669167117329832 chr8 94532613 94533378 + 0.669167117329832 NA promoter-TSS (NM_153507) promoter-TSS (NM_153507) -33 NM_153507 234577 Mm.291815 NM_153507 ENSMUSG00000034361 Cpne2 3322401K10Rik copine II protein-coding common_peak1_61_65_-0.373944579805672_5.85742182945562_0.66882990514363-3 chr8 54609840 54610278 + 0.66882990514363 NA TTS (NM_133711) TTS (NM_133711) 9278 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak1_61_65_-0.373944579805672_5.85742182945562_0.66882990514363-2 chr7 119719950 119720727 + 0.66882990514363 NA intron (NM_145585, intron 2 of 4) CpG 3281 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding common_peak2_61_65_-0.373944579805672_5.85742182945562_0.66882990514363 chr16 55525894 55526584 + 0.66882990514363 NA Intergenic Intergenic 31508 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_61_65_-0.373944579805672_5.85742182945562_0.66882990514363 chr2 180709228 180710001 + 0.66882990514363 NA promoter-TSS (NM_001289651) promoter-TSS (NM_001289651) 385 NM_177852 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak2_61_65_-0.373944579805672_5.85742182945562_0.66882990514363-2 chr3 126692787 126693557 + 0.66882990514363 NA intron (NM_001025438, intron 3 of 18) intron (NM_001025438, intron 3 of 18) 96221 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_78_51_0.317127948134185_5.85900369220818_0.668829905143617-2 chr5 124862909 124863778 + 0.668829905143617 NA intron (NM_001081750, intron 1 of 3) CpG-11549 638 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak2_78_51_0.317127948134185_5.85900369220818_0.668829905143617-3 chr9 107580551 107581351 + 0.668829905143617 NA promoter-TSS (NM_178020) promoter-TSS (NM_178020) 282 NM_019750 56441 Mm.10305 NM_019750 ENSMUSG00000079334 Nat6 AI225910|Fus2 N-acetyltransferase 6 protein-coding common_peak2_78_51_0.317127948134185_5.85900369220818_0.668829905143617 chr1 36368541 36369115 + 0.668829905143617 NA intron (NM_172652, intron 1 of 20) CpG 353 NM_172652 226976 Mm.24734 NM_172652 ENSMUSG00000010453 Kansl3 4632411B12Rik|4932435K23|AI431067|AI647574|C85723|Kiaa1310|mKIAA1310 KAT8 regulatory NSL complex subunit 3 protein-coding common_peak2_114_77_0.27005300211464_6.42042871991957_0.668628453799232 chr9 109931885 109932812 + 0.668628453799232 NA intron (NM_001205332, intron 1 of 17) CpG 574 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding common_peak1_93_94_-0.303249284602138_6.41823096602988_0.668628453799232 chr16 55837989 55839298 + 0.668628453799232 NA promoter-TSS (NM_030612) promoter-TSS (NM_030612) -2 NM_001159395 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_345_251_0.156102136793694_8.05533099189676_0.668579293004224 chr2 32875325 32878798 + 0.668579293004224 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 927 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_494_365_0.130693708375317_8.5810466924717_0.668558083005687 chr7 16399594 16403135 + 0.668558083005687 NA intron (NM_198631, intron 1 of 13) CpG-12704 168 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_172_120_0.22157380259226_7.02965013857072_0.668330858795223 chr19 5689123 5690767 + 0.668330858795223 NA 5' UTR (NM_022012, exon 3 of 12) 5' UTR (NM_022012, exon 3 of 12) 814 NM_022012 26403 Mm.185026 NM_022012 ENSMUSG00000004054 Map3k11 2610017K16Rik|Mlk3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding common_peak1_146_141_-0.242608353484417_7.02844294276247_0.668330858795223 chr1 125434134 125435484 + 0.668330858795223 NA intron (NM_001205386, intron 2 of 12) intron (NM_001205386, intron 2 of 12) 918 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_127_87_0.249443486860766_6.58415336206768_0.668004632230112-2 chr5 142822670 142824036 + 0.668004632230112 NA Intergenic Intergenic -5966 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_127_87_0.249443486860766_6.58415336206768_0.668004632230112 chr15 98634024 98635194 + 0.668004632230112 NA promoter-TSS (NM_001286226) promoter-TSS (NM_001286226) -158 NM_007581 12297 Mm.3544 NM_007581 ENSMUSG00000003352 Cacnb3 Beta3|CAB3|Ca(v)beta3|Cchb3 calcium channel, voltage-dependent, beta 3 subunit protein-coding common_peak1_127_87_0.249443486860766_6.58415336206768_0.668004632230112 chr5 110978843 110980396 + 0.668004632230112 NA intron (NM_001267622, intron 2 of 22) CpG -24525 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA common_peak2_82_84_-0.321067315246784_6.24885727851431_0.667430062205824 chr8 11322589 11324243 + 0.667430062205824 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -10590 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_82_84_-0.321067315246784_6.24885727851431_0.667430062205824 chr2 26932481 26933347 + 0.667430062205824 NA intron (NM_011512, intron 1 of 5) intron (NM_011512, intron 1 of 5) 597 NM_011512 20932 Mm.300594 NM_011512 ENSMUSG00000014867 Surf4 AL033340|AL033373|Surf-4 surfeit gene 4 protein-coding common_peak2_82_84_-0.321067315246784_6.24885727851431_0.667430062205824-2 chr8 123717767 123718483 + 0.667430062205824 NA Intergenic Intergenic -15833 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA common_peak2_102_68_0.289062908280058_6.2530559109182_0.667430062205824 chr4 83314996 83316168 + 0.667430062205824 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 8607 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_444_326_0.140707340509234_8.4235004957527_0.667101544694967 chr2 128427473 128430302 + 0.667101544694967 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 464 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak2_189_133_0.208621203694766_7.17039979230515_0.66631373724972 chr8 31521358 31523283 + 0.66631373724972 NA Intergenic Intergenic 154571 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_142_98_0.238261933181524_6.74848758667037_0.666111423730289-2 chr19 20389670 20390926 + 0.666111423730289 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 373 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak2_142_98_0.238261933181524_6.74848758667037_0.666111423730289 chr7 81344198 81345799 + 0.666111423730289 NA exon (NM_009092, exon 2 of 5) exon (NM_009092, exon 2 of 5) 236 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding common_peak1_142_98_0.238261933181524_6.74848758667037_0.666111423730289 chr10 117375779 117376891 + 0.666111423730289 NA intron (NM_001013391, intron 1 of 9) CpG 638 NM_001013391 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak2_207_146_0.204700890899017_7.30202279028587_0.666024210332527 chr11 116532698 116534319 + 0.666024210332527 NA intron (NM_025367, intron 1 of 5) CpG 270 NM_025367 20698 Mm.20944 NM_011451 ENSMUSG00000061878 Sphk1 1110006G24Rik|Sk1|Spk1 sphingosine kinase 1 protein-coding common_peak1_59_37_0.3755500521823_5.43570253953474_0.665814527695537 chr12 110485792 110486211 + 0.665814527695537 NA intron (NM_001081457, intron 1 of 12) intron (NM_001081457, intron 1 of 12) 262 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_59_37_0.3755500521823_5.43570253953474_0.665814527695537-5 chr8 111057479 111058157 + 0.665814527695537 NA TTS (NM_028274) TTS (NM_028274) 1479 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak2_59_37_0.3755500521823_5.43570253953474_0.665814527695537 chr12 75827387 75827790 + 0.665814527695537 NA intron (NM_001005510, intron 1 of 115) intron (NM_001005510, intron 1 of 115) 9270 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak1_59_37_0.3755500521823_5.43570253953474_0.665814527695537-3 chr3 41741922 41742451 + 0.665814527695537 NA promoter-TSS (NM_001291048) promoter-TSS (NM_001291048) 328 NR_155540 67161 Mm.331001 NM_001081411 ENSMUSG00000059834 Sclt1 2610207F23Rik|4931421F20Rik|CAGGS-SB10|Tg(ACTB-sb10)1Dla|Tg(CAG-sb10)1Dla sodium channel and clathrin linker 1 protein-coding common_peak1_44_49_-0.43248804234814_5.42761216860065_0.665814527695537-2 chr6 135000540 135001098 + 0.665814527695537 NA Intergenic PB1D9|SINE|Alu -10793 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak2_44_49_-0.43248804234814_5.42761216860065_0.665814527695537 chr1 173912249 173912924 + 0.665814527695537 NA intron (NM_001033450, intron 1 of 6) intron (NM_001033450, intron 1 of 6) 460 NM_001301745 381308 Mm.490248 NM_001033450 ENSMUSG00000026536 Ifi211 A730048F03|Ifi205b|Mnda|ifi-205-B interferon activated gene 211 protein-coding common_peak2_44_49_-0.43248804234814_5.42761216860065_0.665814527695537-3 chr19 5294997 5295372 + 0.665814527695537 NA intron (NM_030109, intron 1 of 20) CpG 271 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding common_peak2_44_49_-0.43248804234814_5.42761216860065_0.665814527695537-2 chr18 16809389 16810188 + 0.665814527695537 NA promoter-TSS (NM_007664) promoter-TSS (NM_007664) -542 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak2_44_49_-0.43248804234814_5.42761216860065_0.665814527695537-5 chr7 25680392 25681050 + 0.665814527695537 NA promoter-TSS (NM_001362154) promoter-TSS (NM_001362154) -59 NM_001362154 232987 Mm.22849 NM_172148 ENSMUSG00000063439 B9d2 stumpy B9 protein domain 2 protein-coding common_peak2_59_37_0.3755500521823_5.43570253953474_0.665814527695537-2 chr3 49756097 49756807 + 0.665814527695537 NA exon (NM_130448, exon 1 of 4) exon (NM_130448, exon 1 of 4) 864 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding unique_peak1_59_37_0.3755500521823_5.43570253953474_0.665814527695537 chr7 143057981 143058976 + 0.665814527695537 NA intron (NM_133655, intron 1 of 7) intron (NM_133655, intron 1 of 7) -4792 NR_110354 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA common_peak1_59_37_0.3755500521823_5.43570253953474_0.665814527695537-2 chr15 13244513 13245205 + 0.665814527695537 NA Intergenic Intergenic -71184 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_59_37_0.3755500521823_5.43570253953474_0.665814527695537-4 chr5 121384780 121385373 + 0.665814527695537 NA intron (NM_172275, intron 1 of 11) intron (NM_172275, intron 1 of 11) 333 NM_001359947 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_44_49_-0.43248804234814_5.42761216860065_0.665814527695537 chr2 60809957 60810554 + 0.665814527695537 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) 71183 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_44_49_-0.43248804234814_5.42761216860065_0.665814527695537-4 chr2 121506235 121506640 + 0.665814527695537 NA promoter-TSS (NM_030234) promoter-TSS (NM_030234) 219 NM_026220 67532 Mm.440764 NM_026220 ENSMUSG00000068479 Mfap1a 4432409M24Rik|Mfap1 microfibrillar-associated protein 1A protein-coding common_peak2_173_121_0.217956306468591_7.03971549079718_0.665531713169161 chr4 150000834 150002011 + 0.665531713169161 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 1814 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_52_57_-0.412210939857712_5.65187552519872_0.665385344403438-3 chr5 32135151 32135700 + 0.665385344403438 NA Intergenic CpG -1047 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_69_44_0.352447916642884_5.66807705465112_0.665385344403438-5 chr8 122431978 122432759 + 0.665385344403438 NA intron (NM_001301284, intron 1 of 4) intron (NM_001301284, intron 1 of 4) 572 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak2_52_57_-0.412210939857712_5.65187552519872_0.665385344403438 chr11 20112176 20112787 + 0.665385344403438 NA intron (NM_146243, intron 1 of 8) CpG 470 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak2_52_57_-0.412210939857712_5.65187552519872_0.665385344403438-2 chr8 47931816 47932400 + 0.665385344403438 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 58443 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_53_57_-0.385434144227412_5.66526392301387_0.665385344403438 chr10 95708072 95708872 + 0.665385344403438 NA Intergenic Intergenic -144326 NM_001358996 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_69_44_0.352447916642884_5.66807705465112_0.665385344403438 chr1 75316550 75317390 + 0.665385344403438 NA promoter-TSS (NM_016878) promoter-TSS (NM_016878) 47 NM_016878 13437 Mm.24680 NM_016878 ENSMUSG00000026209 Dnpep AA407814 aspartyl aminopeptidase protein-coding common_peak1_69_44_0.352447916642884_5.66807705465112_0.665385344403438-4 chr8 69654521 69655120 + 0.665385344403438 NA intron (NM_001177527, intron 1 of 3) CpG 264 NM_001177527 636741 Mm.480188 NM_001177527 ENSMUSG00000091764 Zfp964 4732490P12|EG636741|Gm7187 zinc finger protein 964 protein-coding common_peak1_53_57_-0.385434144227412_5.66526392301387_0.665385344403438 chr12 16853572 16853983 + 0.665385344403438 NA Intergenic Intergenic -41201 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak1_52_57_-0.412210939857712_5.65187552519872_0.665385344403438 chr18 66292105 66292652 + 0.665385344403438 NA promoter-TSS (NM_178793) promoter-TSS (NM_178793) -540 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak1_69_44_0.352447916642884_5.66807705465112_0.665385344403438-3 chr3 122081523 122082473 + 0.665385344403438 NA intron (NM_007378, intron 7 of 49) B1_Mm|SINE|Alu 37538 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_52_57_-0.412210939857712_5.65187552519872_0.665385344403438-2 chr4 89040101 89041140 + 0.665385344403438 NA Intergenic Intergenic -9687 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak1_53_57_-0.385434144227412_5.66526392301387_0.665385344403438-2 chr16 45078635 45079426 + 0.665385344403438 NA Intergenic Intergenic -14981 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_53_57_-0.385434144227412_5.66526392301387_0.665385344403438-2 chr18 69345812 69346589 + 0.665385344403438 NA promoter-TSS (NM_001361126) promoter-TSS (NM_001361126) 40 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_68_44_0.331835807694034_5.65777100017669_0.665385344403438 chr19 38593588 38594265 + 0.665385344403438 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 69729 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak1_69_44_0.352447916642884_5.66807705465112_0.665385344403438-2 chr1 135760017 135760369 + 0.665385344403438 NA Intergenic Intergenic -5892 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak1_68_44_0.331835807694034_5.65777100017669_0.665385344403438 chr19 37955983 37956740 + 0.665385344403438 NA intron (NM_001302140, intron 22 of 53) intron (NM_001302140, intron 22 of 53) 87216 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_29_35_-0.539392456243183_4.90022877332072_0.664636481544818 chr10 31467607 31468069 + 0.664636481544818 NA Intergenic Intergenic -21880 NM_001359366 21987 Mm.439966 NM_009413 ENSMUSG00000000296 Tpd52l1 D53 tumor protein D52-like 1 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-2 chr1 155812215 155812807 + 0.664636481544818 NA intron (NM_001024945, intron 1 of 11) CpG 388 NM_023268 104009 Mm.27035 NM_023268 ENSMUSG00000033684 Qsox1 1300003H02Rik|QSOX|Qscn6|SOx|b2b2673Clo quiescin Q6 sulfhydryl oxidase 1 protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818 chr11 86647821 86648156 + 0.664636481544818 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 23287 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818-6 chr4 124700915 124701463 + 0.664636481544818 NA intron (NM_010213, intron 1 of 5) intron (NM_010213, intron 1 of 5) 490 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-5 chr10 88730400 88730910 + 0.664636481544818 NA promoter-TSS (NM_025859) promoter-TSS (NM_025859) 446 NM_001037166 237433 Mm.478763 NM_001037166 Gm4925 EG237433 predicted gene 4925 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-14 chr5 135933068 135933709 + 0.664636481544818 NA intron (NM_018871, intron 1 of 1) intron (NM_018871, intron 1 of 1) 1253 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-4 chr12 17509871 17510216 + 0.664636481544818 NA Intergenic Intergenic -34830 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak2_41_25_0.412094977878288_4.90648720708024_0.664636481544818-2 chr3 37361268 37361708 + 0.664636481544818 NA intron (NM_008006, intron 1 of 2) B1_Mus1|SINE|Alu 12835 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding unique_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818 chr11 3904791 3905461 + 0.664636481544818 NA Intergenic MIR3|SINE|MIR 9538 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding unique_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818 chr1 89784062 89784557 + 0.664636481544818 NA intron (NM_178119, intron 12 of 17) intron (NM_178119, intron 12 of 17) -100417 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-13 chr9 104002775 104003305 + 0.664636481544818 NA exon (NM_172460, exon 1 of 8) exon (NM_172460, exon 1 of 8) 496 NM_172460 74025 Mm.479273 NM_028721 ENSMUSG00000032558 Nphp3 3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy nephronophthisis 3 (adolescent) protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-12 chr3 95819554 95819857 + 0.664636481544818 NA promoter-TSS (NM_001081293) promoter-TSS (NM_001081293) -752 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding unique_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-2 chr11 84870944 84871350 + 0.664636481544818 NA promoter-TSS (NM_153144) promoter-TSS (NM_153144) 224 NR_131197 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA unique_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-3 chr9 70049008 70049589 + 0.664636481544818 NA Intergenic Intergenic -11210 NM_028087 72077 Mm.195555 NM_028087 ENSMUSG00000032226 Gcnt3 2010013H22Rik|2210021I22Rik|2210401J11Rik glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818-7 chr8 84989210 84989691 + 0.664636481544818 NA Intergenic Intergenic -1145 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-8 chr17 78736019 78736469 + 0.664636481544818 NA intron (NM_011500, intron 1 of 17) CpG 316 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-8 chr19 3999739 4000155 + 0.664636481544818 NA promoter-TSS (NM_025529) promoter-TSS (NM_025529) -633 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000110949 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak2_41_25_0.412094977878288_4.90648720708024_0.664636481544818 chr14 66280391 66280932 + 0.664636481544818 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 391 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_29_35_-0.539392456243183_4.90022877332072_0.664636481544818 chr2 90744630 90745159 + 0.664636481544818 NA promoter-TSS (NM_018828) promoter-TSS (NM_018828) -476 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818-4 chr10 59800490 59800870 + 0.664636481544818 NA intron (NM_001359267, intron 8 of 11) intron (NM_001359267, intron 8 of 11) -78911 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-4 chr10 75898251 75898782 + 0.664636481544818 NA intron (NM_011418, intron 7 of 8) intron (NM_011418, intron 7 of 8) 5118 NM_001358985 70377 Mm.275878 NM_024440 ENSMUSG00000009092 Derl3 1810006I20Rik|1810063P04Rik|IZP6|derlin-3 Der1-like domain family, member 3 protein-coding common_peak2_41_25_0.412094977878288_4.90648720708024_0.664636481544818-4 chr7 28349921 28350425 + 0.664636481544818 NA promoter-TSS (NM_013647) promoter-TSS (NM_013647) -516 NM_013647 20055 Mm.702 NM_013647 ENSMUSG00000037563 Rps16 AA420385|AI317031 ribosomal protein S16 protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-6 chr14 66280405 66280935 + 0.664636481544818 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 382 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-11 chr3 87160380 87160967 + 0.664636481544818 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 14074 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-16 chr8 33930091 33930397 + 0.664636481544818 NA promoter-TSS (NM_001286168) promoter-TSS (NM_001286168) -381 NM_001042675 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-2 chr11 100770718 100770957 + 0.664636481544818 NA intron (NM_031871, intron 1 of 8) intron (NM_031871, intron 1 of 8) 120 NM_031871 80860 Mm.37308 NM_031871 ENSMUSG00000017747 Ghdc D11Lgp1e GH3 domain containing protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-7 chr15 98880563 98881209 + 0.664636481544818 NA intron (NM_026967, intron 1 of 7) intron (NM_026967, intron 1 of 7) 528 NM_026967 69159 Mm.259708 NM_026967 ENSMUSG00000023755 Rhebl1 1810036J22Rik|Rheb2 Ras homolog enriched in brain like 1 protein-coding common_peak1_29_35_-0.539392456243183_4.90022877332072_0.664636481544818-3 chr3 90601074 90601536 + 0.664636481544818 NA intron (NM_011310, intron 1 of 2) MIRb|SINE|MIR 1091 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-6 chr13 49213969 49214251 + 0.664636481544818 NA intron (NM_026738, intron 1 of 5) intron (NM_026738, intron 1 of 5) 1916 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-17 chr9 61371509 61372047 + 0.664636481544818 NA promoter-TSS (NM_001083927) promoter-TSS (NM_001083927) -588 NM_001083928 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-4 chr7 89940611 89941124 + 0.664636481544818 NA non-coding (NR_111916, exon 1 of 1) non-coding (NR_111916, exon 1 of 1) 337 NM_001291289 67669 Mm.28679 NM_026304 ENSMUSG00000062797 Hikeshi 0610007P06Rik|1110002N09Rik|l(7)6Rn|l7Rn6 heat shock protein nuclear import factor protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-10 chr3 79976540 79977071 + 0.664636481544818 NA Intergenic Intergenic 90875 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak2_29_35_-0.539392456243183_4.90022877332072_0.664636481544818 chr10 82622299 82623110 + 0.664636481544818 NA intron (NM_001135569, intron 2 of 2) CpG 524 NM_001135569 544717 Mm.334867 NM_001135567 ENSMUSG00000063320 1190007I07Rik - RIKEN cDNA 1190007I07 gene protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-3 chr12 8380145 8380528 + 0.664636481544818 NA Intergenic Intergenic 66903 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-12 chr8 40962659 40963066 + 0.664636481544818 NA intron (NM_026840, intron 2 of 5) intron (NM_026840, intron 2 of 5) 36629 NM_026840 68797 Mm.284246 NM_026840 ENSMUSG00000031595 Pdgfrl 1110039P19Rik|AV013190 platelet-derived growth factor receptor-like protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818-2 chr1 165302966 165303327 + 0.664636481544818 NA intron (NM_001310430, intron 1 of 5) intron (NM_001310430, intron 1 of 5) 523 NM_001310430 240888 Mm.329929 NM_001081126 ENSMUSG00000040836 Gpr161 Gm208|Gm208Gpr|vl G protein-coupled receptor 161 protein-coding common_peak2_29_35_-0.539392456243183_4.90022877332072_0.664636481544818-2 chr5 142464078 142464451 + 0.664636481544818 NA intron (NM_172725, intron 1 of 16) CpG 333 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding unique_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-3 chr3 129998589 129999166 + 0.664636481544818 NA intron (NM_207209, intron 11 of 23) intron (NM_207209, intron 11 of 23) -28671 NM_001293644 66815 Mm.31056 NM_025779 ENSMUSG00000027994 Mcub 9030408N13Rik|Ccdc109b mitochondrial calcium uniporter dominant negative beta subunit protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-9 chr17 80289749 80290128 + 0.664636481544818 NA promoter-TSS (NM_194269) promoter-TSS (NM_194269) -274 NM_194269 378462 Mm.45208 NM_194269 ENSMUSG00000045257 Morn2 Mopt MORN repeat containing 2 protein-coding common_peak2_41_25_0.412094977878288_4.90648720708024_0.664636481544818-3 chr4 41740483 41741233 + 0.664636481544818 NA exon (NM_001286551, exon 2 of 4) exon (NM_001286551, exon 2 of 4) 501 NM_001286540 18391 Mm.425181 NM_011014 ENSMUSG00000036078 Sigmar1 Oprs1|Sig1R|sigma1R sigma non-opioid intracellular receptor 1 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818 chr1 134082559 134083128 + 0.664636481544818 NA Intergenic Intergenic -3688 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-15 chr6 113166384 113166989 + 0.664636481544818 NA Intergenic Intergenic 28698 NM_177763 269788 Mm.37943 NM_177763 ENSMUSG00000042873 Lhfpl4 1190004M23Rik|AI604880|B230384L07|mKIAA4027 lipoma HMGIC fusion partner-like protein 4 protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-5 chr13 51333763 51334177 + 0.664636481544818 NA Intergenic Intergenic -74648 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818 chr1 20618823 20619278 + 0.664636481544818 NA promoter-TSS (NM_153179) promoter-TSS (NM_153179) -993 NM_153179 241035 Mm.249253 NM_153179 ENSMUSG00000043760 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 protein-coding common_peak1_29_35_-0.539392456243183_4.90022877332072_0.664636481544818-2 chr12 102757168 102757698 + 0.664636481544818 NA promoter-TSS (NM_025666) promoter-TSS (NM_025666) 377 NM_001142939 100859931 Mm.291222 NM_001142939 ENSMUSG00000041716 Gm20604 AK010878-Moap1 predicted gene 20604 protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818-3 chr10 16589688 16590260 + 0.664636481544818 NA Intergenic Intergenic 505808 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_29_35_-0.539392456243183_4.90022877332072_0.664636481544818-2 chr2 28582664 28583226 + 0.664636481544818 NA exon (NM_001290484, exon 1 of 12) exon (NM_001290484, exon 1 of 12) 334 NM_148928 70239 Mm.274120 NM_148928 ENSMUSG00000026816 Gtf3c5 2700084A09Rik|TFIIIC63|TFiiiC2-63 general transcription factor IIIC, polypeptide 5 protein-coding unique_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-2 chr19 60945713 60946151 + 0.664636481544818 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 56183 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-10 chr4 148513559 148513869 + 0.664636481544818 NA intron (NM_020009, intron 29 of 57) intron (NM_020009, intron 29 of 57) -13252 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-9 chr2 29827400 29827845 + 0.664636481544818 NA intron (NM_026615, intron 1 of 4) CpG 233 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-13 chr4 11757342 11757956 + 0.664636481544818 NA promoter-TSS (NM_019753) promoter-TSS (NM_019753) -508 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-5 chr8 109185078 109185838 + 0.664636481544818 NA intron (NR_126329, intron 5 of 9) intron (NR_126329, intron 5 of 9) 64287 NR_151498 105243282 Mm.203332 NR_151498 4922502B01Rik 2900056M07Rik RIKEN cDNA 4922502B01 gene ncRNA common_peak1_42_25_0.44580281206834_4.92334112417526_0.664636481544818-3 chr10 68274865 68275574 + 0.664636481544818 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 3507 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-7 chr15 78300199 78300738 + 0.664636481544818 NA intron (NM_001287389, intron 1 of 11) intron (NM_001287389, intron 1 of 11) 5253 NM_007781 12984 Mm.1940 NM_007781 ENSMUSG00000071714 Csf2rb2 AIC2A|BetaIl3|Bil3|Csfgmrb|Il3r|Il3rb|Il3rb2 colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) protein-coding common_peak1_41_25_0.412094977878288_4.90648720708024_0.664636481544818-11 chr7 140882456 140882893 + 0.664636481544818 NA promoter-TSS (NM_001177804) promoter-TSS (NM_001177804) 280 NM_011875 23997 Mm.29760 NM_011875 ENSMUSG00000025487 Psmd13 S11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 protein-coding common_peak2_42_25_0.44580281206834_4.92334112417526_0.664636481544818-5 chr17 66341247 66341641 + 0.664636481544818 NA intron (NM_001114098, intron 13 of 14) intron (NM_001114098, intron 13 of 14) 108306 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_29_35_-0.539392456243183_4.90022877332072_0.664636481544818-4 chr8 10977959 10978465 + 0.664636481544818 NA Intergenic Intergenic -29638 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA common_peak2_357_322_-0.153167761930661_8.25880647372859_0.664527065691876 chr3 145651549 145654243 + 0.664527065691876 NA Intergenic MER5A|DNA|hAT-Charlie -2911 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_115_78_0.264077293626919_6.43581939499056_0.664364916549124 chr15 97247440 97248646 + 0.664364916549124 NA promoter-TSS (NM_001164563) promoter-TSS (NM_001164563) -756 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_94_95_-0.303197126995375_6.43336393722347_0.664364916549124 chr6 13607515 13608030 + 0.664364916549124 NA intron (NM_028990, intron 1 of 4) CpG 326 NR_155435 101118 Mm.254845 NM_028990 ENSMUSG00000029569 Tmem168 5730526F17Rik|8430437G11Rik|AI462344|AI504145 transmembrane protein 168 protein-coding common_peak1_115_78_0.264077293626919_6.43581939499056_0.664364916549124 chr2 118388608 118389700 + 0.664364916549124 NA promoter-TSS (NM_001177806) promoter-TSS (NM_001177806) 42 NM_001177806 27103 Mm.217616 NM_013719 ENSMUSG00000005102 Eif2ak4 2610011M03|GCN2|MGCN2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding common_peak1_129_88_0.255351683096106_6.60340927251445_0.664210415292965-2 chr4 47351724 47353029 + 0.664210415292965 NA promoter-TSS (NM_009370) promoter-TSS (NM_009370) -846 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak1_129_88_0.255351683096106_6.60340927251445_0.664210415292965-3 chr5 117115224 117116325 + 0.664210415292965 NA exon (NM_178622, exon 1 of 12) exon (NM_178622, exon 1 of 12) 219 NM_001122666 71954 Mm.34456 NM_178622 ENSMUSG00000066900 Suds3 2400003N08Rik|2410008L21Rik|AU067672|mSds3 suppressor of defective silencing 3 homolog (S. cerevisiae) protein-coding common_peak1_129_88_0.255351683096106_6.60340927251445_0.664210415292965 chr19 9978820 9979776 + 0.664210415292965 NA Intergenic Intergenic -1302 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_106_106_-0.289300949371988_6.59681651171515_0.66421041529294 chr16 87495029 87495836 + 0.66421041529294 NA promoter-TSS (NR_040375) promoter-TSS (NR_040375) 437 NM_009840 12469 Mm.328673 NM_009840 ENSMUSG00000025613 Cct8 AI132397|Cctq|Tcpq chaperonin containing Tcp1, subunit 8 (theta) protein-coding common_peak1_91_60_0.305060984660124_6.08326782989295_0.663690440871726 chr13 36117299 36118130 + 0.663690440871726 NA promoter-TSS (NM_024274) promoter-TSS (NM_024274) 71 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_90_60_0.289404906893112_6.07543979100944_0.663690440871726 chr8 84687413 84687889 + 0.663690440871726 NA intron (NM_025788, intron 1 of 5) CpG 211 NM_025788 66830 Mm.289698 NM_025788 ENSMUSG00000001910 Nacc1 2010001H03Rik|4930511N13Rik|Btbd14b|Nac1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing protein-coding common_peak1_91_60_0.305060984660124_6.08326782989295_0.663690440871726-2 chr2 35978863 35979781 + 0.663690440871726 NA exon (NM_029774, exon 1 of 10) exon (NM_029774, exon 1 of 10) 302 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_91_60_0.305060984660124_6.08326782989295_0.663690440871726-3 chr2 121867112 121867948 + 0.663690440871726 NA promoter-TSS (NM_001205371) promoter-TSS (NM_001205371) -175 NM_001205371 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak2_72_75_-0.343512077877659_6.07617147450476_0.663690440871714-2 chr3 27584394 27585049 + 0.663690440871714 NA TTS (NR_037275) TTS (NR_037275) 274 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak1_72_75_-0.343512077877659_6.07617147450476_0.663690440871714-2 chr8 121828771 121829537 + 0.663690440871714 NA intron (NM_145605, intron 1 of 11) intron (NM_145605, intron 1 of 11) 415 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak2_72_75_-0.343512077877659_6.07617147450476_0.663690440871714 chr1 88473688 88474558 + 0.663690440871714 NA Intergenic Intergenic 35943 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding common_peak1_72_75_-0.343512077877659_6.07617147450476_0.663690440871714 chr15 76350278 76351012 + 0.663690440871714 NA promoter-TSS (NM_001164608) promoter-TSS (NM_001164608) 465 NM_025340 106025 Mm.41463 NM_025340 ENSMUSG00000022552 Sharpin 0610041B22Rik|AW121341|RBCKL1|SIPL1|cpdm SHANK-associated RH domain interacting protein protein-coding common_peak1_251_232_-0.184925805553934_7.77172324187731_0.663504155867753 chr6 108534405 108537001 + 0.663504155867753 NA intron (NM_010585, intron 60 of 61) L1MC2|LINE|L1 45960 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_158_110_0.225134811573965_6.90698327213709_0.66336211152753 chr11 59839462 59840640 + 0.66336211152753 NA promoter-TSS (NM_011991) promoter-TSS (NM_011991) -284 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding common_peak1_158_110_0.225134811573965_6.90698327213709_0.66336211152753 chr3 103020527 103021548 + 0.66336211152753 NA intron (NM_001310693, intron 1 of 17) CpG 491 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak1_134_130_-0.248274231456656_6.90928588580912_0.66336211152753 chr18 35872952 35874331 + 0.66336211152753 NA Intergenic CpG 18954 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_174_122_0.214388426813954_7.04970871874622_0.662774953187984 chr19 5015851 5017203 + 0.662774953187984 NA Intergenic Intergenic -7479 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding common_peak1_174_122_0.214388426813954_7.04970871874622_0.662774953187984-2 chr5 21054704 21056010 + 0.662774953187984 NA intron (NM_011203, intron 1 of 17) CpG 554 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_120_118_-0.266507002331619_6.76156426214213_0.662737936897264 chr8 11007882 11009491 + 0.662737936897264 NA promoter-TSS (NM_001081212) promoter-TSS (NM_001081212) -256 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak1_144_99_0.243658750783178_6.76568556516631_0.662737936897239 chr9 110688776 110690374 + 0.662737936897239 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 33072 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_103_69_0.282145198363658_6.2703556161268_0.662654265687252 chr3 66290614 66292126 + 0.662654265687252 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 5467 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding common_peak2_103_69_0.282145198363658_6.2703556161268_0.662654265687252 chr15 100551135 100551901 + 0.662654265687252 NA intron (NM_001355497, intron 1 of 15) CpG 490 NM_033476 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding common_peak2_62_66_-0.372718892210938_5.8797297443523_0.662566236663818 chr4 141139045 141139722 + 0.662566236663818 NA intron (NM_001277195, intron 1 of 3) CpG 413 NR_102344 213491 Mm.332006 NM_174996 ENSMUSG00000040842 Szrd1 1110022I03|D4Ertd22e SUZ RNA binding domain containing 1 protein-coding common_peak2_62_66_-0.372718892210938_5.8797297443523_0.662566236663818-2 chr4 149875715 149876749 + 0.662566236663818 NA Intergenic Intergenic 78774 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak1_62_66_-0.372718892210938_5.8797297443523_0.662566236663818 chr15 44428144 44428650 + 0.662566236663818 NA promoter-TSS (NM_026149) promoter-TSS (NM_026149) -90 NM_026149 67429 Mm.490404 NM_026149 ENSMUSG00000038736 Nudcd1 4921532K09Rik|AA407246|AW260430|AW556235|CML66-L|Cml66 NudC domain containing 1 protein-coding common_peak2_80_52_0.325461998564415_5.89065145384541_0.662566236663806-2 chr4 141598792 141599548 + 0.662566236663806 NA intron (NM_133754, intron 1 of 8) MIRb|SINE|MIR 754 NM_001163256 74202 Mm.490327 NM_133754 ENSMUSG00000006219 Fblim1 2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s) filamin binding LIM protein 1 protein-coding common_peak2_79_52_0.307666529261987_5.88175371919419_0.662566236663806 chr19 47219103 47219692 + 0.662566236663806 NA intron (NM_021360, intron 1 of 5) intron (NM_021360, intron 1 of 5) -9446 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding common_peak1_79_52_0.307666529261987_5.88175371919419_0.662566236663806-3 chr18 60622349 60622924 + 0.662566236663806 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 1669 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_80_52_0.325461998564415_5.89065145384541_0.662566236663806 chr1 160195203 160195949 + 0.662566236663806 NA intron (NM_001347121, intron 1 of 2) intron (NM_001347121, intron 1 of 2) 244 NM_001347121 64659 Mm.29599 NM_025474 ENSMUSG00000058267 Mrps14 1810032L21Rik|AL022847|Rpms14 mitochondrial ribosomal protein S14 protein-coding common_peak1_80_52_0.325461998564415_5.89065145384541_0.662566236663806-2 chr11 98963502 98964437 + 0.662566236663806 NA promoter-TSS (NM_001361954) promoter-TSS (NM_001361954) -903 NM_001361954 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_80_52_0.325461998564415_5.89065145384541_0.662566236663806-6 chr7 127769327 127770382 + 0.662566236663806 NA promoter-TSS (NM_198424) promoter-TSS (NM_198424) 39 NM_198424 269999 Mm.36852 NM_198424 ENSMUSG00000043964 Orai3 9930124N15|BC061259|Tmem142c ORAI calcium release-activated calcium modulator 3 protein-coding common_peak2_80_52_0.325461998564415_5.89065145384541_0.662566236663806 chr12 73123844 73124906 + 0.662566236663806 NA intron (NM_008612, intron 1 of 7) intron (NM_008612, intron 1 of 7) 658 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding common_peak2_80_52_0.325461998564415_5.89065145384541_0.662566236663806-4 chr9 50856668 50857638 + 0.662566236663806 NA intron (NM_001286553, intron 1 of 16) CpG 229 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_80_52_0.325461998564415_5.89065145384541_0.662566236663806-5 chr5 121451491 121452355 + 0.662566236663806 NA promoter-TSS (NM_029912) promoter-TSS (NM_029912) 551 NM_026129 67397 Mm.154570 NM_026129 ENSMUSG00000029616 Erp29 1200015M03Rik|2810446M09Rik|AW209030|Erp28|Erp31|PDI-Db endoplasmic reticulum protein 29 protein-coding common_peak1_79_52_0.307666529261987_5.88175371919419_0.662566236663806 chr1 134803667 134804770 + 0.662566236663806 NA promoter-TSS (NR_015606) promoter-TSS (NR_015606) -497 NR_015606 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak1_79_52_0.307666529261987_5.88175371919419_0.662566236663806-4 chr2 94405850 94406842 + 0.662566236663806 NA promoter-TSS (NR_027831) promoter-TSS (NR_027831) 343 NM_183106 74569 Mm.248504 NM_183106 ENSMUSG00000027194 Ttc17 9130020K17Rik|D2Bwg1005e tetratricopeptide repeat domain 17 protein-coding common_peak1_80_52_0.325461998564415_5.89065145384541_0.662566236663806-4 chr4 3777621 3778582 + 0.662566236663806 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 57554 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_80_52_0.325461998564415_5.89065145384541_0.662566236663806-3 chr16 91372759 91373408 + 0.662566236663806 NA intron (NM_001347258, intron 1 of 7) CpG 300 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak2_80_52_0.325461998564415_5.89065145384541_0.662566236663806-3 chr7 45015523 45016238 + 0.662566236663806 NA intron (NM_001008422, intron 1 of 10) CpG 369 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak1_79_52_0.307666529261987_5.88175371919419_0.662566236663806-2 chr10 93800109 93800955 + 0.662566236663806 NA Intergenic Intergenic -31023 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-7 chr6 83349512 83349865 + 0.662333595915626 NA intron (NM_175277, intron 1 of 3) intron (NM_175277, intron 1 of 3) 204 NM_175277 78653 Mm.391470 NM_175277 ENSMUSG00000045160 Bola3 1810056O20Rik bolA-like 3 (E. coli) protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-2 chr15 75678066 75678779 + 0.662333595915626 NA intron (NM_028404, intron 1 of 13) intron (NM_028404, intron 1 of 13) 378 NM_001355589 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-3 chr15 31247014 31247499 + 0.662333595915626 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 22871 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-6 chr4 127326705 127327667 + 0.662333595915626 NA intron (NM_001160012, intron 1 of 1) (TAAAA)n|Simple_repeat|Simple_repeat 1939 NM_008126 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-5 chr17 72960019 72960550 + 0.662333595915626 NA Intergenic Intergenic 41979 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626 chr10 82699245 82699716 + 0.662333595915626 NA intron (NM_001081218, intron 1 of 14) CpG 473 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838|fkls host cell factor C2 protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-6 chr5 92929391 92930020 + 0.662333595915626 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 31712 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626 chr2 30286466 30286872 + 0.662333595915626 NA promoter-TSS (NM_177648) promoter-TSS (NM_177648) 236 NM_198304 227699 Mm.330119 NM_198304 ENSMUSG00000052533 Nup188 BC025526|U89435|mKIAA0169 nucleoporin 188 protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-2 chr11 43900405 43901269 + 0.662333595915626 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) 400 NM_001284380 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-3 chr2 137430196 137430833 + 0.662333595915626 NA Intergenic Intergenic -313994 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-4 chr17 29263684 29264197 + 0.662333595915626 NA promoter-TSS (NM_026845) promoter-TSS (NM_026845) 31 NM_026845 68816 Mm.328928 NM_026845 ENSMUSG00000024007 Ppil1 1110060O10Rik|AI327391|Cypl1 peptidylprolyl isomerase (cyclophilin)-like 1 protein-coding common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-8 chr8 117327436 117327825 + 0.662333595915626 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -21540 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-5 chr3 146450575 146451151 + 0.662333595915626 NA intron (NM_028836, intron 1 of 5) intron (NM_028836, intron 1 of 5) 396 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-4 chr3 94837515 94837813 + 0.662333595915626 NA promoter-TSS (NM_172683) promoter-TSS (NM_172683) 97 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak1_37_42_-0.457101300156951_5.19771410462362_0.662333595915626 chr11 53802868 53803217 + 0.662333595915626 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 32569 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626-8 chr8 115333469 115333876 + 0.662333595915626 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 373222 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_36_42_-0.495304013644656_5.17861274787977_0.662333595915626 chr1 194976414 194976977 + 0.662333595915626 NA non-coding (NR_033564, exon 1 of 5) non-coding (NR_033564, exon 1 of 5) 264 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_37_42_-0.457101300156951_5.19771410462362_0.662333595915626-7 chr5 107996342 107997442 + 0.662333595915626 NA Intergenic B2_Mm2|SINE|B2 -9815 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak1_50_31_0.390666459563906_5.19533322978195_0.662333595915619 chr4 128811732 128812311 + 0.662333595915619 NA Intergenic Intergenic -5909 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding common_peak1_50_31_0.390666459563906_5.19533322978195_0.662333595915619-5 chr9 67840389 67840907 + 0.662333595915619 NA intron (NM_177184, intron 1 of 84) intron (NM_177184, intron 1 of 84) 252 NM_177184 320528 Mm.241454 NM_177184 ENSMUSG00000035284 Vps13c AI552542|AV026040|C230055H22Rik|W51662|chorein vacuolar protein sorting 13C protein-coding common_peak1_50_31_0.390666459563906_5.19533322978195_0.662333595915619 chr1 58973382 58974040 + 0.662333595915619 NA promoter-TSS (NM_172406) promoter-TSS (NM_172406) 189 NR_151686 227154 Mm.286006 NM_172656 ENSMUSG00000026027 Stradb AA792893|Als2cr2|B830008M19|D1Ucla2|ILPIP|ILPIPA|PRO1038|Papk|Syradb STE20-related kinase adaptor beta protein-coding common_peak2_50_31_0.390666459563906_5.19533322978195_0.662333595915619-2 chr8 122223864 122224497 + 0.662333595915619 NA Intergenic Intergenic -57961 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_50_31_0.390666459563906_5.19533322978195_0.662333595915619 chr8 70611405 70611925 + 0.662333595915619 NA Intergenic CpG -3351 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak1_50_31_0.390666459563906_5.19533322978195_0.662333595915619-2 chr14 30825618 30826160 + 0.662333595915619 NA exon (NM_028839, exon 1 of 8) exon (NM_028839, exon 1 of 8) 295 NM_028839 69179 Mm.143025 NM_028839 ENSMUSG00000006526 Tmem110 1810038N08Rik|2310014H19Rik|AW554125|STIMATE transmembrane protein 110 protein-coding common_peak1_50_31_0.390666459563906_5.19533322978195_0.662333595915619-3 chr16 97096036 97096526 + 0.662333595915619 NA intron (NM_031174, intron 1 of 32) intron (NM_031174, intron 1 of 32) 74454 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding common_peak1_50_31_0.390666459563906_5.19533322978195_0.662333595915619-4 chr6 85068907 85069451 + 0.662333595915619 NA intron (NM_177077, intron 1 of 21) CpG 334 NM_177077 75914 Mm.159621 NM_177077 ENSMUSG00000033769 Exoc6b 4930569O18Rik|G430127E12Rik|Sec15b|Sec15l2|mKIAA0919 exocyst complex component 6B protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-4 chr12 84285591 84286082 + 0.662033714151238 NA intron (NM_001252625, intron 1 of 9) intron (NM_001252625, intron 1 of 9) 540 NM_001252626 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding common_peak2_34_20_0.459038569767043_4.62183670766228_0.662033714151238-3 chr12 86871688 86871997 + 0.662033714151238 NA Intergenic Intergenic 12972 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-10 chr4 43969432 43970155 + 0.662033714151238 NA intron (NM_027450, intron 3 of 4) (TC)n|Simple_repeat|Simple_repeat 12091 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding unique_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238 chr15 33644711 33645291 + 0.662033714151238 NA intron (NR_045070, intron 2 of 5) intron (NR_045070, intron 2 of 5) 8435 NR_045070 75880 Mm.396109 NR_045070 ENSMUSG00000115779 4930592A05Rik - RIKEN cDNA 4930592A05 gene ncRNA common_peak2_34_20_0.459038569767043_4.62183670766228_0.662033714151238 chr1 58741713 58741985 + 0.662033714151238 NA intron (NM_001355056, intron 7 of 8) intron (NM_001355056, intron 7 of 8) 11297 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-7 chr17 47294455 47294698 + 0.662033714151238 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 64346 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-2 chr10 78184639 78184985 + 0.662033714151238 NA intron (NM_029546, intron 1 of 20) intron (NM_029546, intron 1 of 20) 337 NM_029546 110816 Mm.103522 NM_029546 ENSMUSG00000032834 Pwp2 6530411D08Rik|Pwp2h|wdp103 PWP2 periodic tryptophan protein homolog (yeast) protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-12 chr5 121849038 121849500 + 0.662033714151238 NA intron (NM_001359950, intron 1 of 2) CpG 272 NM_001359949 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding common_peak2_34_20_0.459038569767043_4.62183670766228_0.662033714151238-2 chr11 35972033 35972353 + 0.662033714151238 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 7896 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_34_20_0.459038569767043_4.62183670766228_0.662033714151238-4 chr2 167553595 167554118 + 0.662033714151238 NA Intergenic B1_Mus1|SINE|Alu 15661 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-11 chr4 139715935 139716469 + 0.662033714151238 NA Intergenic Intergenic 62664 NM_031873 83770 Mm.190612 NM_031873 ENSMUSG00000028738 Tas1r2 Gpr71|T1r2|TR2 taste receptor, type 1, member 2 protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-5 chr13 21811849 21812180 + 0.662033714151238 NA exon (NM_175657, exon 1 of 1) exon (NM_175657, exon 1 of 1) 230 NM_175657 319161 Mm.261664 NM_175657 ENSMUSG00000069305 Hist1h4n - histone cluster 1, H4n protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-8 chr2 173255633 173256054 + 0.662033714151238 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 20690 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-6 chr15 76351494 76351747 + 0.662033714151238 NA promoter-TSS (NM_025340) promoter-TSS (NM_025340) 326 NM_026859 68877 Mm.289680 NM_026859 ENSMUSG00000022553 Maf1 1110068E11Rik|AU042856 MAF1 homolog, negative regulator of RNA polymerase III protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-3 chr11 94543515 94543961 + 0.662033714151238 NA intron (NM_001013381, intron 5 of 8) intron (NM_001013381, intron 5 of 8) 5469 NM_001013381 237926 Mm.342275 NM_001013381 ENSMUSG00000039096 Rsad1 B430319G23|BC056485 radical S-adenosyl methionine domain containing 1 protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-9 chr4 24496545 24497024 + 0.662033714151238 NA non-coding (NR_149739, exon 1 of 25) non-coding (NR_149739, exon 1 of 25) 333 NM_199467 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-14 chrX 96100765 96101126 + 0.662033714151238 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 4900 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238 chr10 7726084 7726548 + 0.662033714151238 NA intron (NM_011835, intron 1 of 10) intron (NM_011835, intron 1 of 10) 316 NM_011835 23924 Mm.28127 NM_011835 ENSMUSG00000019794 Katna1 - katanin p60 (ATPase-containing) subunit A1 protein-coding common_peak1_34_20_0.459038569767043_4.62183670766228_0.662033714151238-13 chr7 64191959 64192349 + 0.662033714151238 NA intron (NM_018752, intron 1 of 13) intron (NM_018752, intron 1 of 13) 6695 NM_018752 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-2 chr15 36376002 36376578 + 0.662033714151235 NA Intergenic B4|SINE|B4 -93143 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding unique_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-2 chr13 15624274 15624661 + 0.662033714151235 NA intron (NM_008130, intron 4 of 14) intron (NM_008130, intron 4 of 14) 160744 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-2 chr6 31033308 31033777 + 0.662033714151235 NA Intergenic RLTR31D_MM|LTR|ERVK 29205 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak1_23_29_-0.596014949163269_4.60888312102688_0.662033714151235 chr2 114201043 114201434 + 0.662033714151235 NA intron (NM_175466, intron 1 of 1) CpG 194 NM_175466 228491 Mm.132523 NM_175466 ENSMUSG00000040321 Zfp770 6430601A21Rik|Znf770 zinc finger protein 770 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-3 chr15 93399211 93399604 + 0.662033714151235 NA 5' UTR (NM_001358749, exon 2 of 9) 5' UTR (NM_001358749, exon 2 of 9) 943 NM_001285863 223828 Mm.74208 NM_146062 ENSMUSG00000036167 Pphln1 CR|HSPC206|HSPC232 periphilin 1 protein-coding unique_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-3 chr13 95306820 95307363 + 0.662033714151235 NA Intergenic Intergenic -16514 NM_001302538 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-4 chr5 92823220 92823784 + 0.662033714151235 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 14120 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-4 chr15 59825757 59826187 + 0.662033714151235 NA Intergenic Intergenic -31013 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-3 chr7 99356051 99356350 + 0.662033714151235 NA Intergenic Intergenic -2961 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-7 chr7 30563382 30563660 + 0.662033714151235 NA promoter-TSS (NM_025498) promoter-TSS (NM_025498) 181 NM_170760 233073 Mm.34790 NM_170760 ENSMUSG00000078765 U2af1l4 AA407033|AF419339|AI451269|AW553050|U2af26 U2 small nuclear RNA auxiliary factor 1-like 4 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-8 chr8 32006872 32007268 + 0.662033714151235 NA Intergenic Intergenic -88867 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_23_29_-0.596014949163269_4.60888312102688_0.662033714151235 chr15 66869192 66869544 + 0.662033714151235 NA Intergenic Intergenic -22025 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235 chr13 76098859 76099281 + 0.662033714151235 NA promoter-TSS (NM_029847) promoter-TSS (NM_029847) 336 NM_001081352 218343 Mm.277964 NM_001081352 ENSMUSG00000033991 Ttc37 - tetratricopeptide repeat domain 37 protein-coding unique_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235 chr12 65172470 65172943 + 0.662033714151235 NA promoter-TSS (NM_172578) promoter-TSS (NM_172578) -126 NM_172578 217653 Mm.21144 NM_172578 ENSMUSG00000047534 Mis18bp1 6720403H11|C79407|Knl2|mKIAA1903 MIS18 binding protein 1 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-5 chr6 17979169 17979678 + 0.662033714151235 NA Intergenic Intergenic 51022 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding common_peak2_23_29_-0.596014949163269_4.60888312102688_0.662033714151235-6 chr6 113333532 113333965 + 0.662033714151235 NA TTS (NM_133926) TTS (NM_133926) 6772 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak1_252_233_-0.18543103898113_7.77764920009284_0.661850700968337 chr18 14681752 14683571 + 0.661850700968337 NA intron (NM_009280, intron 1 of 10) CpG 253 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak1_164_157_-0.231167824171953_7.18819683609113_0.661300281683839 chr11 88523944 88525822 + 0.661300281683839 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -94368 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_234_217_-0.188976081867482_7.67369628384319_0.661057075344322 chr4 126129708 126131911 + 0.661057075344322 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -17194 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-31 chr6 17505070 17505493 + 0.660903317613906 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 41324 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_9_14_-0.8501386730636_3.48182125907672_0.660903317613906 chr19 44743772 44743983 + 0.660903317613906 NA Intergenic Intergenic -13517 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-26 chr4 8510207 8510415 + 0.660903317613906 NA Intergenic Intergenic -25333 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-17 chr17 17179369 17179610 + 0.660903317613906 NA intron (NM_001357988, intron 1 of 3) intron (NM_001357988, intron 1 of 3) 184 NM_001357988 626854 Mm.436630 NM_001039232 Gm38396 - predicted gene, 38396 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-35 chr7 45367437 45367712 + 0.660903317613906 NA promoter-TSS (NM_029741) promoter-TSS (NM_029741) 341 NR_027802 50994 Mm.389897 NM_016664 ENSMUSG00000091510 Mtag2 MAG metastasis associated gene 2 ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-4 chr1 193395219 193395520 + 0.660903317613906 NA Intergenic Intergenic -25087 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-12 chr13 6417539 6417741 + 0.660903317613906 NA Intergenic Intergenic -130517 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak1_9_14_-0.8501386730636_3.48182125907672_0.660903317613906 chr11 72083482 72083704 + 0.660903317613906 NA intron (NM_001081641, intron 3 of 18) intron (NM_001081641, intron 3 of 18) 41091 NM_144526 109212 Mm.33118 NM_144526 ENSMUSG00000020808 Pimreg 2610008F03Rik|6720460F02Rik|AI115087|CATS|Fam64a PICALM interacting mitotic regulator protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-43 chr9 41481314 41481651 + 0.660903317613906 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 6589 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-7 chr10 81545596 81545911 + 0.660903317613906 NA promoter-TSS (NM_010301) promoter-TSS (NM_010301) -707 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-41 chr8 61642008 61642301 + 0.660903317613906 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -50985 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906 chr1 45925305 45925548 + 0.660903317613906 NA 5' UTR (NM_016917, exon 1 of 8) 5' UTR (NM_016917, exon 1 of 8) 168 NM_016917 53945 Mm.28756 NM_016917 ENSMUSG00000025993 Slc40a1 Dusg|Fpn1|IREG1|MTP|MTP1|Ol5|Pcm|Slc11a3|Slc39a1 solute carrier family 40 (iron-regulated transporter), member 1 protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-8 chr2 135737762 135738002 + 0.660903317613906 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) -26956 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-18 chr17 21650218 21650431 + 0.660903317613906 NA promoter-TSS (NM_001166497) promoter-TSS (NM_001166497) -287 NM_001166497 73229 Mm.296733 NM_001166497 ENSMUSG00000035868 Zfp983 3110052M02Rik|mszf57|mszf71 zinc finger protein 983 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-45 chr9 111335054 111335321 + 0.660903317613906 NA intron (NM_001164659, intron 2 of 21) intron (NM_001164659, intron 2 of 21) 23448 NM_001164659 320429 Mm.270754 NM_001164659 ENSMUSG00000062296 Trank1 A230061D21Rik|C030048J01Rik|Gm187|Lba1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-42 chr8 90839513 90839819 + 0.660903317613906 NA intron (NM_177224, intron 1 of 39) L3|LINE|CR1 10831 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-29 chr5 32159643 32159891 + 0.660903317613906 NA Intergenic Intergenic 23295 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-3 chr18 56400467 56400670 + 0.660903317613906 NA exon (NM_001360917, exon 1 of 14) exon (NM_001360917, exon 1 of 14) 228 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-39 chr8 8602842 8603153 + 0.660903317613906 NA Intergenic Intergenic 57776 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-20 chr18 56709068 56709286 + 0.660903317613906 NA intron (NM_010721, intron 1 of 10) intron (NM_010721, intron 1 of 10) 1364 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-10 chr7 84087264 84087567 + 0.660903317613906 NA promoter-TSS (NM_030728) promoter-TSS (NM_030728) -910 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-44 chr9 57424124 57424423 + 0.660903317613906 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 15463 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-19 chr17 72922817 72923057 + 0.660903317613906 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 4632 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-34 chr7 27361706 27361984 + 0.660903317613906 NA exon (NM_032610, exon 33 of 36) exon (NM_032610, exon 33 of 36) -5837 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-28 chr4 144930875 144931086 + 0.660903317613906 NA Intergenic RSINE1|SINE|B4 37843 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-2 chr15 11518754 11518948 + 0.660903317613906 NA Intergenic Intergenic -119193 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-7 chr2 104589652 104589953 + 0.660903317613906 NA promoter-TSS (NM_177253) promoter-TSS (NM_177253) -682 NM_177253 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-15 chr15 98056442 98056721 + 0.660903317613906 NA intron (NM_144851, intron 13 of 17) intron (NM_144851, intron 13 of 17) -36008 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-2 chr16 86345652 86345882 + 0.660903317613906 NA Intergenic Intergenic -444642 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-36 chr7 63914506 63914778 + 0.660903317613906 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) -2215 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-5 chr10 4122262 4122525 + 0.660903317613906 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 90727 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-23 chr2 101815036 101815317 + 0.660903317613906 NA intron (NM_001355625, intron 1 of 8) intron (NM_001355625, intron 1 of 8) -17469 NM_001083810 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-22 chr19 53016431 53016738 + 0.660903317613906 NA intron (NM_133216, intron 3 of 20) intron (NM_133216, intron 3 of 20) -5828 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-5 chr18 73947718 73948052 + 0.660903317613906 NA intron (NM_172632, intron 2 of 5) intron (NM_172632, intron 2 of 5) -6856 NM_001360936 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-9 chr5 51191042 51191362 + 0.660903317613906 NA Intergenic Intergenic 362719 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-16 chr16 8860486 8860872 + 0.660903317613906 NA Intergenic Intergenic 30579 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-46 chr9 111478163 111478542 + 0.660903317613906 NA intron (NM_172928, intron 2 of 4) intron (NM_172928, intron 2 of 4) 39271 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-13 chr14 79588021 79588314 + 0.660903317613906 NA intron (NM_026474, intron 2 of 12) intron (NM_026474, intron 2 of 12) 507 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-4 chr18 60713578 60713938 + 0.660903317613906 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 13808 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-2 chr1 87900709 87901011 + 0.660903317613906 NA intron (NM_177646, intron 3 of 29) Lx7|LINE|L1 -46561 NR_136921 100503175 Mm.426422 NR_136921 ENSMUSG00000101942 Gm19582 - predicted gene, 19582 ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-21 chr19 7569996 7570273 + 0.660903317613906 NA intron (NM_001362425, intron 2 of 4) B4|SINE|B4 12649 NM_001362425 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 AdPLA|C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-8 chr11 72469065 72469273 + 0.660903317613906 NA intron (NM_153060, intron 2 of 12) intron (NM_153060, intron 2 of 12) 5858 NM_001276383 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-30 chr5 99241993 99242219 + 0.660903317613906 NA intron (NM_181318, intron 2 of 13) intron (NM_181318, intron 2 of 13) 10821 NM_181318 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-25 chr2 180949323 180949581 + 0.660903317613906 NA intron (NM_001141933, intron 1 of 5) intron (NM_001141933, intron 1 of 5) 5247 NM_001141933 58237 Mm.40361 NM_021426 ENSMUSG00000027574 Nkain4 AB030182|C030019F02Rik Na+/K+ transporting ATPase interacting 4 protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906 chr11 8571440 8571641 + 0.660903317613906 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 92995 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-14 chr15 3580686 3580998 + 0.660903317613906 NA intron (NM_001048178, intron 1 of 8) intron (NM_001048178, intron 1 of 8) 1000 NM_001286370 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding unique_peak1_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-3 chrX 100625599 100625810 + 0.660903317613906 NA promoter-TSS (NM_008446) promoter-TSS (NM_008446) 237 NM_028303 72621 Mm.291607 NM_028303 ENSMUSG00000015668 Pdzd11 1810012H22Rik|2310079D11Rik|2700099C19Rik|AI854765|Pdzk11 PDZ domain containing 11 protein-coding unique_peak1_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-2 chr2 145905358 145905571 + 0.660903317613906 NA intron (NM_026425, intron 1 of 5) intron (NM_026425, intron 1 of 5) 2223 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-6 chr10 59537349 59537704 + 0.660903317613906 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 79166 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-10 chr11 115536543 115536789 + 0.660903317613906 NA promoter-TSS (NM_133354) promoter-TSS (NM_133354) -436 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-24 chr2 156202491 156202724 + 0.660903317613906 NA intron (NM_172674, intron 1 of 17) intron (NM_172674, intron 1 of 17) 5960 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-38 chr7 143059095 143059406 + 0.660903317613906 NA intron (NM_133655, intron 1 of 7) intron (NM_133655, intron 1 of 7) -5564 NR_110354 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-37 chr7 74459524 74459848 + 0.660903317613906 NA intron (NM_001038643, intron 2 of 10) MER20|DNA|hAT-Charlie 95094 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-11 chr13 5825285 5825495 + 0.660903317613906 NA Intergenic Intergenic 32702 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-47 chr9 119036184 119036438 + 0.660903317613906 NA intron (NM_133710, intron 6 of 7) intron (NM_133710, intron 6 of 7) 4515 NR_029742 387218 NR_029742 ENSMUSG00000065513 Mir26a-1 Mirn26a|Mirn26a-1|miR-26a|mir-26a-1 microRNA 26a-1 ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-33 chr6 146979803 146980018 + 0.660903317613906 NA intron (NM_001355729, intron 5 of 27) intron (NM_001355729, intron 5 of 27) -25489 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-40 chr8 36826955 36827319 + 0.660903317613906 NA intron (NM_001194940, intron 4 of 17) L2a|LINE|L2 -94083 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-9 chr11 88513238 88513549 + 0.660903317613906 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -105858 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-3 chr1 93748838 93749109 + 0.660903317613906 NA intron (NM_025920, intron 2 of 5) intron (NM_025920, intron 2 of 5) 5865 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-27 chr4 86612277 86612482 + 0.660903317613906 NA promoter-TSS (NM_173400) promoter-TSS (NM_173400) -324 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-6 chr2 11705885 11706087 + 0.660903317613906 NA intron (NM_001271499, intron 1 of 6) intron (NM_001271499, intron 1 of 6) 274 NM_001271500 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding unique_peak2_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-32 chr6 51173206 51173420 + 0.660903317613906 NA Intergenic Intergenic 96597 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak1_9_14_-0.8501386730636_3.48182125907672_0.660903317613906-3 chr18 62479312 62479547 + 0.660903317613906 NA Intergenic Intergenic 64423 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-26 chr3 14895770 14896149 + 0.660903317613904 NA intron (NM_001357334, intron 5 of 7) intron (NM_001357334, intron 5 of 7) 9671 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-5 chr12 112793478 112793761 + 0.660903317613904 NA Intergenic Intergenic -15356 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-22 chr2 94289402 94289656 + 0.660903317613904 NA Intergenic Intergenic -28130 NR_030431 735259 NR_030431 ENSMUSG00000076335 Mir670 Mirn670|mir-670|mmu-mir-670 microRNA 670 ncRNA unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-15 chr17 6109457 6109697 + 0.660903317613904 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 2747 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-47 chr9 75526230 75526716 + 0.660903317613904 NA intron (NM_001357828, intron 3 of 10) intron (NM_001357828, intron 3 of 10) 33184 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-40 chr7 49091225 49091430 + 0.660903317613904 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 70831 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-27 chr3 51944145 51944432 + 0.660903317613904 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 160718 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-41 chr7 49700407 49700672 + 0.660903317613904 NA Intergenic Intergenic -58567 NM_001146053 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-25 chr2 166996761 166996956 + 0.660903317613904 NA promoter-TSS (NM_011490) promoter-TSS (NM_011490) -559 NM_001109905 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen double-stranded RNA binding protein 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-4 chr12 111691946 111692209 + 0.660903317613904 NA Intergenic Intergenic 13972 NM_177374 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-13 chr9 44484492 44484717 + 0.660903317613904 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) 1779 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-8 chr2 29421749 29422026 + 0.660903317613904 NA intron (NM_001290489, intron 2 of 6) intron (NM_001290489, intron 2 of 6) 43373 NM_001290490 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-14 chr16 13109385 13109597 + 0.660903317613904 NA promoter-TSS (NM_015769) promoter-TSS (NM_015769) -245 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-39 chr6 142288698 142288977 + 0.660903317613904 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) -9588 NM_010491 15874 Mm.415 NM_010491 ENSMUSG00000041681 Iapp DAP islet amyloid polypeptide protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-10 chr14 101869763 101870068 + 0.660903317613904 NA intron (NM_001347628, intron 1 of 26) intron (NM_001347628, intron 1 of 26) 29292 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-31 chr4 116005574 116005896 + 0.660903317613904 NA intron (NR_151700, intron 2 of 14) intron (NR_151700, intron 2 of 14) 12189 NM_010173 14073 Mm.256025 NM_010173 ENSMUSG00000034171 Faah AW412498 fatty acid amide hydrolase protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-38 chr6 124700669 124700973 + 0.660903317613904 NA exon (NM_145130, exon 6 of 13) exon (NM_145130, exon 6 of 13) 11357 NM_013536 14791 Mm.6390 NM_013536 ENSMUSG00000004268 Emg1 C2f|Grcc2f EMG1 N1-specific pseudouridine methyltransferase protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-4 chr11 117331276 117331525 + 0.660903317613904 NA promoter-TSS (NM_001113488) promoter-TSS (NM_001113488) -315 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904 chr14 7854105 7854360 + 0.660903317613904 NA intron (NM_001081427, intron 1 of 45) MIRb|SINE|MIR 36275 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-11 chr6 73222032 73222263 + 0.660903317613904 NA promoter-TSS (NM_001164669) promoter-TSS (NM_001164669) -516 NM_001164669 330355 Mm.333166 NM_001164669 ENSMUSG00000052861 Dnah6 9830168K20|A730004I20Rik|Dnahc6|mKIAA1697|mdhc6 dynein, axonemal, heavy chain 6 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-34 chr5 66558225 66558609 + 0.660903317613904 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 60400 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-3 chr12 99627707 99627912 + 0.660903317613904 NA non-coding (NR_045288, exon 1 of 2) non-coding (NR_045288, exon 1 of 2) 165 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904 chr10 16588745 16588934 + 0.660903317613904 NA Intergenic Intergenic 506943 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-7 chr15 78492721 78492963 + 0.660903317613904 NA intron (NM_008368, intron 1 of 9) intron (NM_008368, intron 1 of 9) 2224 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-35 chr5 72647884 72648147 + 0.660903317613904 NA intron (NM_001081205, intron 1 of 5) intron (NM_001081205, intron 1 of 5) 219 NM_001081205 70701 Mm.38884 NM_001081205 ENSMUSG00000067219 Nipal1 3830408G10Rik|Npal1 NIPA-like domain containing 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-24 chr2 144174724 144174930 + 0.660903317613904 NA intron (NR_136884, intron 2 of 3) MLT1H1|LTR|ERVL-MaLR 14463 NR_136884 433481 Mm.330630 NR_136884 ENSMUSG00000074758 Gm5535 EG433481 predicted gene 5535 ncRNA common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-10 chr3 96905617 96905841 + 0.660903317613904 NA promoter-TSS (NM_026229) promoter-TSS (NM_026229) -431 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-3 chr11 4135785 4135997 + 0.660903317613904 NA exon (NM_027859, exon 2 of 9) exon (NM_027859, exon 2 of 9) 731 NM_027859 71673 Mm.240586 NM_027859 ENSMUSG00000003581 Rnf215 0610009J22Rik|AW557025|C77903 ring finger protein 215 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-29 chr3 137151834 137152091 + 0.660903317613904 NA Intergenic Intergenic -189116 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-13 chr15 60111872 60112169 + 0.660903317613904 NA Intergenic Intergenic -95402 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-30 chr4 59445714 59445906 + 0.660903317613904 NA Intergenic Intergenic -7177 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-12 chr8 122164484 122164716 + 0.660903317613904 NA Intergenic Intergenic -117541 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-23 chr2 137107311 137107571 + 0.660903317613904 NA intron (NM_013822, intron 2 of 25) intron (NM_013822, intron 2 of 25) 9079 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-7 chr13 15863879 15864319 + 0.660903317613904 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 56856 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-46 chr8 126392714 126392939 + 0.660903317613904 NA intron (NM_175434, intron 6 of 6) intron (NM_175434, intron 6 of 6) -29675 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-37 chr6 91489409 91489649 + 0.660903317613904 NA 3' UTR (NM_009531, exon 16 of 16) 3' UTR (NM_009531, exon 16 of 16) 15778 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-16 chr19 28517998 28518342 + 0.660903317613904 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -160054 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904-3 chr7 144635839 144636092 + 0.660903317613904 NA intron (NM_001242349, intron 11 of 24) intron (NM_001242349, intron 11 of 24) -53529 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904-2 chr6 17980308 17980558 + 0.660903317613904 NA Intergenic Intergenic 50012 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-42 chr7 75267747 75267995 + 0.660903317613904 NA intron (NM_001360571, intron 1 of 13) intron (NM_001360571, intron 1 of 13) 34738 NM_001360574 64176 Mm.273082 NM_153579 ENSMUSG00000053025 Sv2b A830038F04Rik|AI850768|mKIAA0735 synaptic vesicle glycoprotein 2 b protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-9 chr2 33221594 33221867 + 0.660903317613904 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 5769 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-44 chr7 105741166 105741367 + 0.660903317613904 NA intron (NM_001161724, intron 7 of 12) intron (NM_001161724, intron 7 of 12) 3072 NM_020024 24075 Mm.274846 NM_020024 ENSMUSG00000043866 Taf10 30kDa|AU041226|TAFII30|Taf2h TATA-box binding protein associated factor 10 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-11 chr15 26374679 26374957 + 0.660903317613904 NA intron (NM_001310774, intron 2 of 2) intron (NM_001310774, intron 2 of 2) 65770 NM_001310774 211147 Mm.54257 NM_177597 ENSMUSG00000022269 March11 9630025C22 membrane-associated ring finger (C3HC4) 11 protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-5 chr13 100729467 100729803 + 0.660903317613904 NA intron (NM_009874, intron 2 of 11) MIRb|SINE|MIR 1307 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904 chr10 12787281 12787658 + 0.660903317613904 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 74266 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-32 chr4 134704605 134704867 + 0.660903317613904 NA promoter-TSS (NM_207237) promoter-TSS (NM_207237) -446 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-33 chr4 135745451 135745799 + 0.660903317613904 NA intron (NM_178257, intron 5 of 6) intron (NM_178257, intron 5 of 6) -14090 NM_001085509 242702 Mm.318639 NM_001085509 ENSMUSG00000037139 Myom3 8430427K15Rik|Gm434 myomesin family, member 3 protein-coding unique_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904-3 chr9 7502464 7502688 + 0.660903317613904 NA intron (NM_019471, intron 1 of 9) intron (NM_019471, intron 1 of 9) 234 NM_019471 17384 Mm.14126 NM_019471 ENSMUSG00000047562 Mmp10 AV377895|MMP-10|SL-2 matrix metallopeptidase 10 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-19 chr19 55539141 55539363 + 0.660903317613904 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 162952 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-9 chr13 73686783 73687075 + 0.660903317613904 NA intron (NM_001359603, intron 5 of 10) intron (NM_001359603, intron 5 of 10) 5707 NM_001359603 74338 Mm.271635 NM_028878 ENSMUSG00000021565 Slc6a19 4632401C08Rik|B<0>AT1 solute carrier family 6 (neurotransmitter transporter), member 19 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-21 chr2 92742403 92742673 + 0.660903317613904 NA Intergenic Intergenic 141421 NM_001356553 76969 Mm.38021 NM_023850 ENSMUSG00000027221 Chst1 2610008E20Rik|AW125896|C6ST|GST-1|Gst1|KS6ST|KSGAL6ST|KSST carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 protein-coding unique_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904 chr2 48499049 48499294 + 0.660903317613904 NA Intergenic Intergenic -314938 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-18 chr19 45011625 45011912 + 0.660903317613904 NA exon (NM_153796, exon 5 of 5) exon (NM_153796, exon 5 of 5) 2651 NM_001348259 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding common_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904-4 chr9 25244982 25245323 + 0.660903317613904 NA Intergenic Intergenic -6839 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-28 chr3 101074092 101074457 + 0.660903317613904 NA intron (NM_011197, intron 3 of 8) intron (NM_011197, intron 3 of 8) 35892 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-8 chr13 34395691 34395907 + 0.660903317613904 NA Intergenic Intergenic -50617 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-45 chr7 122158750 122159101 + 0.660903317613904 NA promoter-TSS (NM_011121) promoter-TSS (NM_011121) -510 NM_011121 18817 Mm.16525 NM_011121 ENSMUSG00000030867 Plk1 Plk|STPK13 polo like kinase 1 protein-coding common_peak2_16_8_0.646960835467384_3.493405419176_0.660903317613904-2 chr4 83316495 83316707 + 0.660903317613904 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 7588 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-20 chr2 92011686 92012013 + 0.660903317613904 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 12321 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-12 chr15 41746213 41746429 + 0.660903317613904 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -42674 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-43 chr7 101108099 101108341 + 0.660903317613904 NA promoter-TSS (NM_001146010) promoter-TSS (NM_001146010) -555 NM_001146010 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-17 chr19 28671649 28671931 + 0.660903317613904 NA intron (NM_175459, intron 1 of 10) intron (NM_175459, intron 1 of 10) -6434 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-6 chr13 112318484 112318814 + 0.660903317613904 NA intron (NM_001168403, intron 3 of 11) intron (NM_001168403, intron 3 of 11) 30131 NM_001168404 77318 Mm.159895 NM_029898 ENSMUSG00000049985 Ankrd55 C030011J08Rik ankyrin repeat domain 55 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-2 chr11 77781707 77781910 + 0.660903317613904 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) 4573 NM_001291212 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-36 chr5 142796189 142796519 + 0.660903317613904 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 21033 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-6 chr13 15852533 15852852 + 0.660903317613904 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 45449 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak1_16_8_0.646960835467384_3.493405419176_0.660903317613904-2 chr10 67098052 67098362 + 0.660903317613904 NA Intergenic Intergenic -1219 NM_178606 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak1_108_107_-0.276192617035022_6.61679119364596_0.660493963649647 chr19 40463371 40464133 + 0.660493963649647 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -12354 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_116_79_0.258226304449416_6.45104124711207_0.66019930050255 chr19 4926716 4928240 + 0.66019930050255 NA intron (NM_133803, intron 1 of 17) intron (NM_133803, intron 1 of 17) 492 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak2_96_96_-0.28830228777605_6.4557616982991_0.66019930050255-2 chr17 12790927 12792246 + 0.66019930050255 NA intron (NR_027784, intron 2 of 2) intron (NR_027784, intron 2 of 2) -21880 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak2_96_96_-0.28830228777605_6.4557616982991_0.66019930050255 chr1 58586373 58587522 + 0.66019930050255 NA promoter-TSS (NM_172513) promoter-TSS (NM_172513) 550 NM_025597 66495 Mm.2033 NM_025597 ENSMUSG00000026032 Ndufb3 2700033I16Rik|CI-B12 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 protein-coding common_peak1_117_79_0.270418010862072_6.4571371003184_0.66019930050255 chr11 95075611 95076796 + 0.66019930050255 NA exon (NM_001306162, exon 2 of 26) exon (NM_001306162, exon 2 of 26) 511 NM_013565 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_95_96_-0.303147154888365_6.44833926474294_0.66019930050255 chr9 63705183 63706405 + 0.66019930050255 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 52200 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_95_96_-0.303147154888365_6.44833926474294_0.66019930050255 chr10 18021939 18023155 + 0.66019930050255 NA intron (NM_028440, intron 1 of 2) intron (NM_028440, intron 1 of 2) 543 NM_001359560 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_175_123_0.210869133063698_7.05963087691872_0.660059622367254 chr15 102981481 102982732 + 0.660059622367254 NA exon (NM_008272, exon 2 of 3) exon (NM_008272, exon 2 of 3) -1043 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA common_peak2_121_119_-0.266789505878887_6.77349584266908_0.659426301801059 chr1 86358363 86359464 + 0.659426301801059 NA promoter-TSS (NR_015507) promoter-TSS (NR_015507) 542 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding common_peak1_92_61_0.297088831393362_6.10274072608356_0.658374650198598 chr6 136808339 136809131 + 0.658374650198598 NA 3' UTR (NM_177688, exon 1 of 1) 3' UTR (NM_177688, exon 1 of 1) 487 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding common_peak2_73_76_-0.342880779210703_6.09534615108955_0.658374650198586 chr15 77928329 77928897 + 0.658374650198586 NA intron (NM_019913, intron 1 of 3) intron (NM_019913, intron 1 of 3) 381 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_73_76_-0.342880779210703_6.09534615108955_0.658374650198586-3 chr8 45974957 45976504 + 0.658374650198586 NA promoter-TSS (NM_001033148) promoter-TSS (NM_001033148) 202 NM_138668 192169 Mm.210882 NM_138668 ENSMUSG00000031634 Ufsp2 1810047C23Rik UFM1-specific peptidase 2 protein-coding common_peak2_73_76_-0.342880779210703_6.09534615108955_0.658374650198586-2 chr7 98656920 98657708 + 0.658374650198586 NA promoter-TSS (NM_172280) promoter-TSS (NM_172280) -745 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak2_54_58_-0.383810748010903_5.69073767535639_0.65827215096213 chr4 132352989 132353752 + 0.65827215096213 NA intron (NR_003270, intron 1 of 2) intron (NR_003270, intron 1 of 2) 316 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA common_peak2_54_58_-0.383810748010903_5.69073767535639_0.65827215096213-2 chr7 81571370 81572130 + 0.65827215096213 NA exon (NM_001004185, exon 1 of 10) exon (NM_001004185, exon 1 of 10) 458 NM_001004185 434204 Mm.181641 NM_001004185 ENSMUSG00000045795 Whamm BB081391|Whdc1|mKIAA1971 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding common_peak1_70_45_0.341058785649718_5.69409134888187_0.658272150962117 chr16 23314975 23316408 + 0.658272150962117 NA intron (NM_001252506, intron 1 of 6) (CAT)n|Simple_repeat|Simple_repeat 25221 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_84_86_-0.320510719331642_6.28268813618291_0.658001583893804 chr10 81349331 81350332 + 0.658001583893804 NA intron (NM_001163165, intron 2 of 9) intron (NM_001163165, intron 2 of 9) 595 NM_001163165 15353 Mm.38474 NM_010440 ENSMUSG00000020232 Hmg20b AW610687|BRAF35|Hmgx2|Hmgxb2|Smarce1r high mobility group 20B protein-coding common_peak1_84_86_-0.320510719331642_6.28268813618291_0.658001583893804-2 chr8 33731976 33732793 + 0.658001583893804 NA promoter-TSS (NM_001167922) promoter-TSS (NM_001167922) 45 NM_001167922 68153 Mm.286104 NM_026584 ENSMUSG00000031585 Gtf2e2 34kDa|AI462509|C330006J08Rik general transcription factor II E, polypeptide 2 (beta subunit) protein-coding common_peak2_85_86_-0.303755945212539_6.29106552324246_0.658001583893804 chr18 75504292 75505705 + 0.658001583893804 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -9647 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_104_70_0.275389495695332_6.28744186735235_0.658001583893804 chr13 74639567 74640343 + 0.658001583893804 NA intron (NM_030711, intron 1 of 18) CpG 102 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak1_454_335_0.133371761284629_8.45900330342107_0.657734377096221 chr6 88938092 88941681 + 0.657734377096221 NA Intergenic Intergenic 37635 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_236_219_-0.190011424595173_7.68635400122707_0.657556992058982 chr8 128664498 128666909 + 0.657556992058982 NA Intergenic Intergenic -19951 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak1_60_38_0.361753850440627_5.46627914408256_0.657471353119199 chr9 102835122 102835887 + 0.657471353119199 NA intron (NM_001284258, intron 1 of 13) CpG 584 NM_001284258 20187 Mm.335391 NM_013649 ENSMUSG00000032547 Ryk AW536699|ERK-3|Vik receptor-like tyrosine kinase protein-coding common_peak1_60_38_0.361753850440627_5.46627914408256_0.657471353119199 chr12 104897740 104898643 + 0.657471353119199 NA Intergenic MER20|DNA|hAT-Charlie -33115 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak2_45_50_-0.42957204017524_5.45763932188387_0.657471353119199-3 chr8 71313162 71313832 + 0.657471353119199 NA intron (NM_001142322, intron 2 of 39) intron (NM_001142322, intron 2 of 39) 40783 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak2_45_50_-0.42957204017524_5.45763932188387_0.657471353119199 chr11 117949246 117950014 + 0.657471353119199 NA Intergenic CpG 19736 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_60_38_0.361753850440627_5.46627914408256_0.657471353119199-2 chr19 16997178 16997980 + 0.657471353119199 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 41461 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_60_38_0.361753850440627_5.46627914408256_0.657471353119199 chr14 30625561 30626211 + 0.657471353119199 NA intron (NM_011103, intron 1 of 17) CpG 322 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak2_60_38_0.361753850440627_5.46627914408256_0.657471353119199-3 chr4 124692889 124693529 + 0.657471353119199 NA intron (NM_026031, intron 1 of 7) intron (NM_026031, intron 1 of 7) 345 NM_026031 67205 Mm.259121 NM_026031 ENSMUSG00000028907 Utp11 2700082D03Rik|CGI-94|Cgi94|Utp11l UTP11 small subunit processome component protein-coding common_peak1_60_38_0.361753850440627_5.46627914408256_0.657471353119199-3 chr2 18998354 18998781 + 0.657471353119199 NA promoter-TSS (NM_001355149) promoter-TSS (NM_001355149) 248 NR_024323 74629 Mm.117687 NR_024323 ENSMUSG00000026736 4930426L09Rik - RIKEN cDNA 4930426L09 gene ncRNA common_peak2_45_50_-0.42957204017524_5.45763932188387_0.657471353119199-2 chr17 87458636 87459457 + 0.657471353119199 NA Intergenic Intergenic -12111 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding common_peak1_60_38_0.361753850440627_5.46627914408256_0.657471353119199-4 chr2 173251180 173251961 + 0.657471353119199 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 24963 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_45_50_-0.42957204017524_5.45763932188387_0.657471353119199 chr8 128487901 128488347 + 0.657471353119199 NA intron (NM_001358959, intron 12 of 16) intron (NM_001358959, intron 12 of 16) 128883 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_60_38_0.361753850440627_5.46627914408256_0.657471353119199-5 chr7 110060957 110061218 + 0.657471353119199 NA promoter-TSS (NM_009281) promoter-TSS (NM_009281) -615 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak2_60_38_0.361753850440627_5.46627914408256_0.657471353119199-2 chr3 103914642 103915176 + 0.657471353119199 NA exon (NM_001356556, exon 1 of 8) exon (NM_001356556, exon 1 of 8) 789 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|KDM9|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding common_peak2_60_38_0.361753850440627_5.46627914408256_0.657471353119199-4 chr5 4758204 4758938 + 0.657471353119199 NA promoter-TSS (NM_021457) promoter-TSS (NM_021457) -355 NM_021457 14362 Mm.246003 NM_021457 ENSMUSG00000044674 Fzd1 AW227548|FZ-1|Fz1 frizzled class receptor 1 protein-coding common_peak1_161_112_0.226148511139182_6.93325321798478_0.657408769257807 chr3 122205720 122207415 + 0.657408769257807 NA Intergenic Intergenic -38990 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak2_177_124_0.215467962164596_7.07351826574438_0.657384792815716 chr5 129500811 129501892 + 0.657384792815716 NA 5' UTR (NM_172276, exon 1 of 18) 5' UTR (NM_172276, exon 1 of 18) 120 NM_172276 231769 Mm.288714 NM_172276 ENSMUSG00000029439 Sfswap 1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8 splicing factor SWAP protein-coding common_peak2_151_145_-0.234771063481359_7.07243902713934_0.657384792815716 chr11 75678369 75680007 + 0.657384792815716 NA promoter-TSS (NM_001277221) promoter-TSS (NM_001277221) -71 NM_001277219 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding common_peak2_333_242_0.158004888847519_8.00381494802954_0.657205863152896 chr19 6234040 6236312 + 0.657205863152896 NA intron (NM_198168, intron 1 of 13) intron (NM_198168, intron 1 of 13) 664 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak1_131_90_0.245161385052573_6.63037533272498_0.656852907478958 chr4 8535700 8536912 + 0.656852907478958 NA intron (NM_021518, intron 1 of 7) CpG 662 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak1_81_53_0.31607206543697_5.91292353488195_0.656512819423962-3 chr19 37263630 37264396 + 0.656512819423962 NA promoter-TSS (NR_040298) promoter-TSS (NR_040298) 82 NR_040299 77059 Mm.251476 NR_040298 4931408D14Rik - RIKEN cDNA 4931408D14 gene ncRNA common_peak2_64_67_-0.349322747614591_5.91280146744304_0.656512819423962 chr13 63563170 63564129 + 0.656512819423962 NA exon (NM_001328514, exon 2 of 24) exon (NM_001328514, exon 2 of 24) 2086 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak1_63_67_-0.371532756179032_5.90169646316082_0.656512819423962 chr2 30441272 30441843 + 0.656512819423962 NA intron (NM_138748, intron 8 of 9) intron (NM_138748, intron 8 of 9) 25507 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak1_81_53_0.31607206543697_5.91292353488195_0.656512819423962-5 chr8 90954793 90955889 + 0.656512819423962 NA intron (NM_177224, intron 3 of 39) intron (NM_177224, intron 3 of 39) 23092 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_64_67_-0.349322747614591_5.91280146744304_0.656512819423962-3 chr9 55511428 55512201 + 0.656512819423962 NA intron (NM_145615, intron 1 of 11) CpG 429 NM_145615 110842 Mm.290853 NM_145615 ENSMUSG00000032314 Etfa 2010200I21Rik|D9Ertd394e electron transferring flavoprotein, alpha polypeptide protein-coding common_peak1_81_53_0.31607206543697_5.91292353488195_0.656512819423962 chr10 40300970 40301832 + 0.656512819423962 NA intron (NM_009665, intron 1 of 7) CpG 785 NM_007444 100041585 Mm.476925 NM_007444 ENSMUSG00000063953 Amd2 AdoMetDC|Amd1|Amd3 S-adenosylmethionine decarboxylase 2 protein-coding common_peak2_63_67_-0.371532756179032_5.90169646316082_0.656512819423962 chr19 5813965 5814797 + 0.656512819423962 NA Intergenic Intergenic -11709 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_81_53_0.31607206543697_5.91292353488195_0.656512819423962-4 chr5 90875271 90876161 + 0.656512819423962 NA Intergenic URR1B|DNA|hAT-Charlie -15529 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding common_peak1_81_53_0.31607206543697_5.91292353488195_0.656512819423962-2 chr19 6014499 6015196 + 0.656512819423962 NA intron (NM_001110504, intron 1 of 21) intron (NM_001110504, intron 1 of 21) 400 NM_007600 12333 Mm.6221 NM_007600 ENSMUSG00000024942 Capn1 Capa-1|Capa1|mu-calpin calpain 1 protein-coding common_peak2_64_67_-0.349322747614591_5.91280146744304_0.656512819423962-2 chr3 152192801 152193663 + 0.656512819423962 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 613 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_194_137_0.20339625951179_7.21022258653406_0.656422706136129 chr8 124862537 124863692 + 0.656422706136129 NA promoter-TSS (NM_025615) promoter-TSS (NM_025615) 81 NM_010322 14712 Mm.29114 NM_010322 ENSMUSG00000031985 Gnpat AU019525|D1Ertd819e|DHAPAT glyceronephosphate O-acyltransferase protein-coding common_peak1_122_120_-0.267068067446702_6.78532920355124_0.656174830756185 chr9 48494566 48495779 + 0.656174830756185 NA promoter-TSS (NM_001004191) promoter-TSS (NM_001004191) 158 NM_001326355 67010 Mm.76911 NM_144948 ENSMUSG00000042396 Rbm7 1200007M24Rik|1500011D06Rik|AU041934|AW554393 RNA binding motif protein 7 protein-coding common_peak1_118_80_0.264584924452714_6.47214246511098_0.656128265330106-2 chr6 52212467 52213907 + 0.656128265330106 NA promoter-TSS (NM_010452) promoter-TSS (NM_010452) -120 NM_010452 15400 Mm.71533 NM_010452 ENSMUSG00000079560 Hoxa3 Hox-1.5|Mo-10 homeobox A3 protein-coding common_peak1_118_80_0.264584924452714_6.47214246511098_0.656128265330106-3 chr7 68020825 68021838 + 0.656128265330106 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 69074 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_118_80_0.264584924452714_6.47214246511098_0.656128265330106 chr14 20155360 20157065 + 0.656128265330106 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 25570 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_213_151_0.19718354401233_7.34651928544975_0.654774510764699 chr5 29735093 29736942 + 0.654774510764699 NA promoter-TSS (NR_028426) promoter-TSS (NR_028426) -81 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_152_146_-0.235225262618247_7.08205971352724_0.65474956417385 chr17 25541158 25543701 + 0.65474956417385 NA Intergenic (CTGTG)n|Simple_repeat|Simple_repeat 23840 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA common_peak2_162_113_0.222252975559683_6.94401650194458_0.654504943821028 chr15 102974882 102976093 + 0.654504943821028 NA Intergenic Intergenic -1545 NM_008272 15427 Mm.4765 NM_008272 ENSMUSG00000036139 Hoxc9 Hox-3.2 homeobox C9 protein-coding common_peak1_137_133_-0.249455266007307_6.94136155745412_0.654504943821028 chr2 154891733 154892792 + 0.654504943821028 NA intron (NM_026030, intron 1 of 8) CpG 644 NM_026030 67204 Mm.377134 NM_026030 ENSMUSG00000074656 Eif2s2 2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B eukaryotic translation initiation factor 2, subunit 2 (beta) protein-coding common_peak2_168_160_-0.223990532568674_7.21892161183028_0.654033157124808-2 chr11 60776147 60778217 + 0.654033157124808 NA promoter-TSS (NM_175491) promoter-TSS (NM_175491) 183 NM_009410 21975 Mm.10708 NM_009410 ENSMUSG00000002814 Top3a - topoisomerase (DNA) III alpha protein-coding common_peak2_168_160_-0.223990532568674_7.21892161183028_0.654033157124808 chr10 84391826 84393647 + 0.654033157124808 NA intron (NM_001004363, intron 3 of 6) (CCTG)n|Simple_repeat|Simple_repeat 47735 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_460_339_0.135065112706339_8.47692349249087_0.653723394462334 chr2 128427101 128430273 + 0.653723394462334 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 664 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak1_133_91_0.250936082010131_6.64902999706208_0.653284972411461 chr14 20930040 20931383 + 0.653284972411461 NA intron (NM_009502, intron 1 of 20) intron (NM_009502, intron 1 of 20) 1313 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_132_91_0.24020556848902_6.64366474030152_0.653284972411461 chr4 137497086 137498373 + 0.653284972411461 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 28926 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_132_91_0.24020556848902_6.64366474030152_0.653284972411461 chr10 111539388 111541274 + 0.653284972411461 NA Intergenic Intergenic 34045 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_110_109_-0.276618349813007_6.64305053861816_0.653284972411461 chr10 67096166 67097674 + 0.653284972411461 NA promoter-TSS (NM_001204915) promoter-TSS (NM_001204915) 68 NM_001204915 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak1_132_91_0.24020556848902_6.64366474030152_0.653284972411461-2 chr18 67984689 67985619 + 0.653284972411461 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 51981 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_132_91_0.24020556848902_6.64366474030152_0.653284972411461-2 chr5 125073235 125074490 + 0.653284972411461 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 70387 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_75_77_-0.323293743890346_6.12375534691708_0.653212744811001-2 chr4 137697850 137698688 + 0.653212744811001 NA intron (NR_138594, intron 1 of 1) intron (NR_138594, intron 1 of 1) 8337 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA common_peak2_74_77_-0.342267754482486_6.11426834162101_0.653212744811001 chr17 29268872 29269646 + 0.653212744811001 NA intron (NM_030561, intron 1 of 8) intron (NM_030561, intron 1 of 8) 471 NM_030561 80748 Mm.290116 NM_030561 ENSMUSG00000052712 BC004004 2400006G15Rik cDNA sequence BC004004 protein-coding common_peak1_74_77_-0.342267754482486_6.11426834162101_0.653212744811001-2 chr5 124031554 124032212 + 0.653212744811001 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 377 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_74_77_-0.342267754482486_6.11426834162101_0.653212744811001 chr18 88893401 88894096 + 0.653212744811001 NA intron (NM_018821, intron 1 of 2) intron (NM_018821, intron 1 of 2) 459 NM_018821 54607 Mm.91920 NM_018821 ENSMUSG00000056153 Socs6 1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4 suppressor of cytokine signaling 6 protein-coding common_peak1_75_77_-0.323293743890346_6.12375534691708_0.653212744811001 chr13 60174368 60175736 + 0.653212744811001 NA 3' UTR (NM_008086, exon 1 of 1) 3' UTR (NM_008086, exon 1 of 1) 2483 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding common_peak1_93_62_0.289326400228894_6.12194312361436_0.653212744810989 chr4 150855162 150856039 + 0.653212744810989 NA promoter-TSS (NR_040649) promoter-TSS (NR_040649) 530 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_409_300_0.142886830448127_8.30506309198377_0.653013986471285 chr18 75375769 75380555 + 0.653013986471285 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 10797 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_147_102_0.230350254727735_6.80167565454709_0.652981896997998 chr8 123224086 123225365 + 0.652981896997998 NA promoter-TSS (NM_194446) promoter-TSS (NM_194446) -116 NM_194446 234854 Mm.190984 NM_194444 ENSMUSG00000033862 Cdk10 BC017131 cyclin-dependent kinase 10 protein-coding common_peak1_147_102_0.230350254727735_6.80167565454709_0.652981896997998 chr8 127226250 127227594 + 0.652981896997998 NA intron (NM_001122850, intron 2 of 15) intron (NM_001122850, intron 2 of 15) -72690 NM_001013581 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak2_124_121_-0.255836556229943_6.80281905944791_0.652981896997973 chr8 123253793 123255232 + 0.652981896997973 NA promoter-TSS (NM_001310661) promoter-TSS (NM_001310661) -290 NM_028200 72325 Mm.276193 NM_028200 ENSMUSG00000001062 Vps9d1 1300018I17Rik|2410004N05Rik|5DOS1|Vsp9d1 VPS9 domain containing 1 protein-coding common_peak1_124_121_-0.255836556229943_6.80281905944791_0.652981896997973 chr9 45934458 45935865 + 0.652981896997973 NA intron (NM_011526, intron 1 of 4) B1_Mus1|SINE|Alu 897 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding common_peak1_604_450_0.116874077328333_8.87542066191955_0.652868096619058 chr3 68492690 68496784 + 0.652868096619058 NA exon (NM_001282045, exon 2 of 8) exon (NM_001282045, exon 2 of 8) 556 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684-2 chr11 100527240 100527729 + 0.652802052802684 NA intron (NM_134037, intron 1 of 27) CpG 516 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding unique_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684 chr11 79644901 79645577 + 0.652802052802684 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -22076 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684-3 chr14 33357019 33357776 + 0.652802052802684 NA intron (NM_153800, intron 5 of 10) intron (NM_153800, intron 5 of 10) 53627 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684-2 chr8 25094760 25095262 + 0.652802052802684 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 6800 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684 chr11 35977626 35978163 + 0.652802052802684 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 2195 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684-6 chr9 69875964 69876549 + 0.652802052802684 NA Intergenic Intergenic -113210 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak2_43_26_0.424287900433592_4.96703145238026_0.652802052802684-3 chr8 126873354 126873803 + 0.652802052802684 NA Intergenic Intergenic 24558 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684-4 chr19 32180312 32180776 + 0.652802052802684 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 30469 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_43_26_0.424287900433592_4.96703145238026_0.652802052802684 chr12 76554803 76555380 + 0.652802052802684 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -7166 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_43_26_0.424287900433592_4.96703145238026_0.652802052802684-2 chr2 72366738 72367312 + 0.652802052802684 NA intron (NM_023057, intron 4 of 19) intron (NM_023057, intron 4 of 19) 81324 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_43_26_0.424287900433592_4.96703145238026_0.652802052802684-5 chr8 113958129 113958866 + 0.652802052802684 NA Intergenic Intergenic -109658 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-4 chr13 13210828 13211709 + 0.652802052802678 NA Intergenic Intergenic 28552 NM_001311129 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-2 chr10 17362668 17363231 + 0.652802052802678 NA Intergenic Intergenic -267167 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678 chr1 34439115 34439698 + 0.652802052802678 NA promoter-TSS (NM_178601) promoter-TSS (NM_178601) 266 NM_027159 69668 Mm.379170 NM_027159 ENSMUSG00000042111 Ccdc115 2310061I09Rik|Ccp1 coiled-coil domain containing 115 protein-coding common_peak1_30_36_-0.531948846502924_4.94347894237749_0.652802052802678 chr19 24280255 24280556 + 0.652802052802678 NA intron (NM_008044, intron 1 of 4) CpG 181 NM_008044 14297 Mm.7319 NM_008044 ENSMUSG00000059363 Fxn FA|FARR|Frda|X25 frataxin protein-coding common_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-4 chr2 72366091 72366452 + 0.652802052802678 NA intron (NM_023057, intron 4 of 19) intron (NM_023057, intron 4 of 19) 80570 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-7 chr15 66878054 66878657 + 0.652802052802678 NA Intergenic Intergenic -13038 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-9 chr2 32571003 32571272 + 0.652802052802678 NA intron (NM_010073, intron 1 of 3) intron (NM_010073, intron 1 of 3) 279 NM_010073 13481 Mm.22001 NM_010073 ENSMUSG00000026810 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 protein-coding unique_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678 chr5 93097554 93098067 + 0.652802052802678 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 4394 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-6 chr13 32495503 32495928 + 0.652802052802678 NA Intergenic CT-rich|Low_complexity|Low_complexity -157171 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-2 chr5 135008533 135008884 + 0.652802052802678 NA promoter-TSS (NM_001190437) promoter-TSS (NM_001190437) -444 NM_001190437 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-6 chr6 87009960 87010276 + 0.652802052802678 NA intron (NM_020045, intron 1 of 7) CpG 282 NM_020045 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding common_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-2 chr1 171038095 171038614 + 0.652802052802678 NA Intergenic CpG 19428 NM_144559 246256 Mm.251254 NM_144559 ENSMUSG00000059089 Fcgr4 4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3 Fc receptor, IgG, low affinity IV protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-11 chr4 129018812 129019274 + 0.652802052802678 NA Intergenic Intergenic 25819 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-8 chr18 24709716 24710335 + 0.652802052802678 NA intron (NM_001289654, intron 1 of 24) CpG 1402 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-3 chr11 78382167 78382670 + 0.652802052802678 NA intron (NM_008238, intron 1 of 8) intron (NM_008238, intron 1 of 8) 4190 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-10 chr4 84884436 84884828 + 0.652802052802678 NA exon (NM_177385, exon 1 of 5) exon (NM_177385, exon 1 of 5) 323 NM_177385 338349 Mm.440562 NM_175275 ENSMUSG00000038070 Cntln AI448092|B430108F07Rik|D530005L17Rik centlein, centrosomal protein protein-coding common_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-5 chr5 5694840 5695295 + 0.652802052802678 NA promoter-TSS (NM_001103156) promoter-TSS (NM_001103156) -499 NM_028734 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_31_36_-0.486468300984399_4.96621921513675_0.652802052802678 chr7 98514025 98514437 + 0.652802052802678 NA Intergenic Intergenic 20009 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-3 chr8 36961765 36962119 + 0.652802052802678 NA Intergenic Intergenic -9500 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_30_36_-0.531948846502924_4.94347894237749_0.652802052802678-3 chr16 29882319 29882980 + 0.652802052802678 NA Intergenic Intergenic 96475 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-13 chr6 39376855 39377559 + 0.652802052802678 NA intron (NM_001361617, intron 1 of 16) intron (NM_001361617, intron 1 of 16) 228 NR_155076 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678 chr1 36060202 36060969 + 0.652802052802678 NA Intergenic Intergenic -7815 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-5 chr13 24831712 24832266 + 0.652802052802678 NA promoter-TSS (NM_025790) promoter-TSS (NM_025790) 330 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding common_peak2_31_36_-0.486468300984399_4.96621921513675_0.652802052802678-12 chr5 91721408 91721926 + 0.652802052802678 NA Intergenic Intergenic 45633 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA common_peak2_232_166_0.183260142080275_7.47533436351419_0.652635969384406 chr15 34442189 34443829 + 0.652635969384406 NA intron (NM_001163485, intron 2 of 4) CpG 216 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-6 chr9 20607430 20607977 + 0.652627812244285 NA intron (NR_033729, intron 1 of 2) intron (NR_033729, intron 1 of 2) 228 NR_033729 66662 Mm.477847 NM_175110 ENSMUSG00000062470 Fbxl12os 5730577I03Rik F-box and leucine-rich repeat protein 12, opposite strand pseudo common_peak1_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-2 chr10 59907346 59907805 + 0.652627812244285 NA Intergenic Intergenic 27984 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285 chr10 108538012 108538545 + 0.652627812244285 NA intron (NM_001358501, intron 9 of 10) intron (NM_001358501, intron 9 of 10) 161882 NM_203660 368203 Mm.452758 NM_203660 ENSMUSG00000112039 Gm5136 C6.1AL|EG368203 predicted gene 5136 protein-coding common_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-4 chr5 21701261 21701833 + 0.652627812244285 NA promoter-TSS (NM_001359963) promoter-TSS (NM_001359963) 75 NM_001359965 242864 Mm.153292 NM_178728 ENSMUSG00000044968 Napepld A530089G06|Mbldc1|NAPE-PLD N-acyl phosphatidylethanolamine phospholipase D protein-coding common_peak1_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-5 chr8 95807702 95808048 + 0.652627812244285 NA promoter-TSS (NM_178078) promoter-TSS (NM_178078) -413 NM_001205226 234594 Mm.259220 NM_153164 ENSMUSG00000036550 Cnot1 6030411K04Rik|AA815922|D830048B13 CCR4-NOT transcription complex, subunit 1 protein-coding unique_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285 chr3 103278800 103279566 + 0.652627812244285 NA promoter-TSS (NM_053170) promoter-TSS (NM_053170) -110 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-3 chr17 6430158 6430698 + 0.652627812244285 NA intron (NM_009342, intron 1 of 4) intron (NM_009342, intron 1 of 4) 316 NM_009342 21648 Mm.1948 NM_009342 ENSMUSG00000096255 Dynlt1b AGS2|Dynlt1|Tctex-1|Tctex1 dynein light chain Tctex-type 1B protein-coding common_peak1_38_43_-0.453057841954728_5.23290269765993_0.652627812244285 chr1 135731156 135731784 + 0.652627812244285 NA intron (NM_007791, intron 1 of 5) intron (NM_007791, intron 1 of 5) 2303 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-2 chr13 34096258 34096680 + 0.652627812244285 NA intron (NR_046184, intron 2 of 4) intron (NR_046184, intron 2 of 4) 16803 NR_046184 432745 Mm.159104 NR_046184 ENSMUSG00000113591 4930447K03Rik - RIKEN cDNA 4930447K03 gene ncRNA common_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-5 chr8 60982316 60983050 + 0.652627812244285 NA intron (NM_173873, intron 1 of 12) intron (NM_173873, intron 1 of 12) 628 NM_173873 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding common_peak2_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-3 chr19 28621269 28621708 + 0.652627812244285 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -56736 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_38_43_-0.453057841954728_5.23290269765993_0.652627812244285-4 chr2 25332018 25332483 + 0.652627812244285 NA promoter-TSS (NM_001029983) promoter-TSS (NM_001029983) 321 NR_027448 100272219 Mm.382103 NR_027448 ENSMUSG00000097345 AA543186 - expressed sequence AA543186 ncRNA common_peak1_51_32_0.374089075523416_5.23143865712016_0.652627812244279-2 chr17 88628326 88628882 + 0.652627812244279 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 2049 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_51_32_0.374089075523416_5.23143865712016_0.652627812244279 chr11 88468311 88468776 + 0.652627812244279 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 115770 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA common_peak1_51_32_0.374089075523416_5.23143865712016_0.652627812244279-5 chr7 143783461 143784018 + 0.652627812244279 NA intron (NM_175534, intron 1 of 1) intron (NM_175534, intron 1 of 1) 761 NM_175534 244238 Mm.183561 NM_175534 ENSMUSG00000048965 Mrgpre C130069N09Rik|Ebrt3|Mgrf|MrgE MAS-related GPR, member E protein-coding common_peak1_51_32_0.374089075523416_5.23143865712016_0.652627812244279-4 chr4 117550415 117550952 + 0.652627812244279 NA exon (NM_080469, exon 1 of 9) exon (NM_080469, exon 1 of 9) 318 NM_080469 140546 Mm.235891 NM_080469 ENSMUSG00000033423 Eri3 PINT1|Prnpip1 exoribonuclease 3 protein-coding common_peak2_51_32_0.374089075523416_5.23143865712016_0.652627812244279 chr3 54692786 54693285 + 0.652627812244279 NA promoter-TSS (NM_019995) promoter-TSS (NM_019995) -70 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak2_51_32_0.374089075523416_5.23143865712016_0.652627812244279-2 chr8 122585243 122586044 + 0.652627812244279 NA intron (NM_001193645, intron 9 of 11) intron (NM_001193645, intron 9 of 11) -8736 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding common_peak1_51_32_0.374089075523416_5.23143865712016_0.652627812244279-3 chr3 51915431 51916194 + 0.652627812244279 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 189194 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding unique_peak1_51_32_0.374089075523416_5.23143865712016_0.652627812244279 chr5 145191077 145191541 + 0.652627812244279 NA intron (NM_020582, intron 1 of 3) intron (NM_020582, intron 1 of 3) 283 NM_020582 57423 Mm.133551 NM_020582 ENSMUSG00000038690 Atp5j2 1110019H14Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 protein-coding common_peak2_260_239_-0.177361349349586_7.81820992093373_0.652238496659506 chr8 123102058 123103875 + 0.652238496659506 NA promoter-TSS (NR_028128) promoter-TSS (NR_028128) -92 NR_028128 100302565 NR_028128 Snord68 MBII-202 small nucleolar RNA, C/D box 68 snoRNA common_peak2_179_126_0.20857350150793_7.09297143752613_0.6521530625992 chr5 65536696 65538424 + 0.6521530625992 NA intron (NM_001310618, intron 1 of 4) CpG 315 NM_001310619 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding common_peak1_98_98_-0.288510013027641_6.48510161356579_0.652148621150893 chr1 135312732 135314353 + 0.652148621150893 NA intron (NM_011590, intron 1 of 5) intron (NM_011590, intron 1 of 5) 195 NM_011590 21854 Mm.2368 NM_011590 ENSMUSG00000062580 Timm17a Tim17a|mTim17a translocase of inner mitochondrial membrane 17a protein-coding common_peak2_98_98_-0.288510013027641_6.48510161356579_0.652148621150893 chr19 38836680 38837484 + 0.652148621150893 NA exon (NM_001362424, exon 1 of 11) exon (NM_001362424, exon 1 of 11) 503 NM_001362424 209478 Mm.391153 NM_145952 ENSMUSG00000048720 Tbc1d12 BC033574 TBC1D12: TBC1 domain family, member 12 protein-coding common_peak2_139_134_-0.239569563651515_6.95703081522507_0.651648108671692 chr1 167270398 167272041 + 0.651648108671692 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 13908 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak1_163_114_0.218414537082819_6.95469731948578_0.651648108671692 chr8 121082529 121084213 + 0.651648108671692 NA promoter-TSS (NR_130109) promoter-TSS (NR_130109) -261 NR_130109 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA common_peak2_139_134_-0.239569563651515_6.95703081522507_0.651648108671692-2 chr8 36638597 36640553 + 0.651648108671692 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -25632 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_55_59_-0.382246481389839_5.7157673549136_0.651432082277441 chr3 144679411 144679866 + 0.651432082277441 NA Intergenic Intergenic 40697 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_71_46_0.330067417421823_5.71962256038855_0.651432082277441 chr14 57889753 57890148 + 0.651432082277441 NA intron (NM_029492, intron 1 of 12) CpG 386 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_71_46_0.330067417421823_5.71962256038855_0.651432082277441-2 chr13 29503093 29504186 + 0.651432082277441 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 352034 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_55_59_-0.382246481389839_5.7157673549136_0.651432082277441-2 chr5 77373149 77373911 + 0.651432082277441 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 34515 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_71_46_0.330067417421823_5.71962256038855_0.651432082277441 chr10 80741497 80742264 + 0.651432082277441 NA intron (NM_007460, intron 1 of 30) CpG 395 NM_007460 11776 Mm.27082 NM_007460 ENSMUSG00000020198 Ap3d1 AA407035|Ap3d|Bolvr|mBLVR1|mh|mocha adaptor-related protein complex 3, delta 1 subunit protein-coding common_peak2_55_59_-0.382246481389839_5.7157673549136_0.651432082277441 chr15 85037273 85038021 + 0.651432082277441 NA intron (NM_001356618, intron 1 of 9) intron (NM_001356618, intron 1 of 9) 585 NM_001356618 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak1_71_46_0.330067417421823_5.71962256038855_0.651432082277441-3 chr8 10964946 10965754 + 0.651432082277441 NA Intergenic Intergenic -36893 NR_135302 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-9 chr7 131371230 131371701 + 0.650819692678081 NA intron (NM_001039534, intron 1 of 5) intron (NM_001039534, intron 1 of 5) 319 NM_001039534 214580 Mm.272948 NM_177609 ENSMUSG00000063179 Pstk 5430423O14Rik|5730458D16Rik|Gm1099|R75284 phosphoseryl-tRNA kinase protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-6 chr6 31033405 31033815 + 0.650819692678081 NA Intergenic Intergenic 29137 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-4 chr12 84881586 84881846 + 0.650819692678081 NA Intergenic Intergenic -5221 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-12 chr9 120001793 120002107 + 0.650819692678081 NA Intergenic Intergenic -17208 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081 chr11 121735372 121735619 + 0.650819692678081 NA Intergenic Intergenic 33068 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081 chr1 182518839 182519152 + 0.650819692678081 NA Intergenic Intergenic -1385 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-3 chr11 107417500 107417774 + 0.650819692678081 NA intron (NR_153311, intron 1 of 9) intron (NR_153311, intron 1 of 9) 53083 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-2 chr12 13217907 13218404 + 0.650819692678081 NA Intergenic Intergenic 31019 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-11 chr8 109682572 109683101 + 0.650819692678081 NA intron (NR_155034, intron 2 of 10) intron (NR_155034, intron 2 of 10) 10458 NR_155034 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-7 chr7 80866444 80866788 + 0.650819692678081 NA intron (NM_009553, intron 2 of 2) intron (NM_009553, intron 2 of 2) 4508 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081 chr1 69278217 69278746 + 0.650819692678081 NA Intergenic Intergenic -170422 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-8 chr7 80866369 80866765 + 0.650819692678081 NA intron (NM_009553, intron 2 of 2) intron (NM_009553, intron 2 of 2) 4459 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-7 chr5 43554654 43555190 + 0.650819692678081 NA intron (NM_001135172, intron 1 of 2) intron (NM_001135172, intron 1 of 2) 39353 NM_001135172 109323 Mm.275553 NM_175425 ENSMUSG00000061535 C1qtnf7 5530401N20Rik|8430425G24Rik|Ctrp7 C1q and tumor necrosis factor related protein 7 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-10 chr8 8275469 8275839 + 0.650819692678081 NA Intergenic Intergenic 385119 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-3 chr12 95488167 95488505 + 0.650819692678081 NA Intergenic Intergenic -203890 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-6 chr2 45110487 45110778 + 0.650819692678081 NA promoter-TSS (NR_110572) promoter-TSS (NR_110572) 101 NR_149354 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-6 chr4 81671676 81672006 + 0.650819692678081 NA Intergenic Intergenic -184828 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-5 chr14 66105981 66106212 + 0.650819692678081 NA intron (NM_007940, intron 5 of 18) intron (NM_007940, intron 5 of 18) 4564 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-7 chr2 148680576 148680858 + 0.650819692678081 NA promoter-TSS (NM_028986) promoter-TSS (NM_028986) -403 NM_001355689 74533 Mm.136913 NM_028986 ENSMUSG00000027439 Gzf1 8430437G08Rik|Zfp336|mGZF1 GDNF-inducible zinc finger protein 1 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-13 chrX 73467876 73468397 + 0.650819692678081 NA Intergenic Intergenic -9107 NM_207104 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-4 chr17 56081460 56081840 + 0.650819692678081 NA intron (NM_008233, intron 1 of 15) intron (NM_008233, intron 1 of 15) 2019 NM_001304785 15193 Mm.12966 NM_008233 ENSMUSG00000002833 Hdgfl2 HRP-2|Hdgfrp2 HDGF like 2 protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-10 chrX 143344350 143344587 + 0.650819692678081 NA intron (NM_001358592, intron 4 of 11) intron (NM_001358592, intron 4 of 11) 49794 NM_001358592 83453 Mm.157697 NM_031258 ENSMUSG00000031283 Chrdl1 CHL|CHL1|Nrln1|VOPT chordin-like 1 protein-coding common_peak1_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-2 chr11 97744382 97744649 + 0.650819692678081 NA promoter-TSS (NR_106180) promoter-TSS (NR_106180) 189 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-8 chr7 126625913 126626148 + 0.650819692678081 NA promoter-TSS (NM_019738) promoter-TSS (NM_019738) -560 NM_019738 56312 Mm.18742 NM_019738 ENSMUSG00000030717 Nupr1 2310032H04Rik|Com1|p8 nuclear protein transcription regulator 1 protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-5 chr18 6960278 6960617 + 0.650819692678081 NA intron (NM_177595, intron 5 of 6) intron (NM_177595, intron 5 of 6) 44332 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-2 chr11 44730267 44730783 + 0.650819692678081 NA intron (NM_001290709, intron 6 of 15) intron (NM_001290709, intron 6 of 15) 112425 NM_001290710 13591 Mm.439662 NM_007897 ENSMUSG00000057098 Ebf1 Ebf|O/E-1|OE-1|Olf-1|Olf1 early B cell factor 1 protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-4 chr15 103359968 103360394 + 0.650819692678081 NA intron (NM_001314041, intron 1 of 30) intron (NM_001314041, intron 1 of 30) 6610 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-9 chr8 126829461 126829747 + 0.650819692678081 NA Intergenic Intergenic -19416 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-8 chr7 113166254 113166768 + 0.650819692678081 NA Intergenic Intergenic -24496 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-5 chr15 103377459 103377743 + 0.650819692678081 NA Intergenic Intergenic -10810 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding unique_peak2_18_24_-0.667637755656333_4.31003731194656_0.650819692678081-3 chr13 49461164 49461432 + 0.650819692678081 NA intron (NR_075085, intron 13 of 13) intron (NR_075085, intron 13 of 13) 39684 NM_001276399 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078 chr16 10542550 10542898 + 0.650819692678078 NA 5' UTR (NM_021428, exon 1 of 2) 5' UTR (NM_021428, exon 1 of 2) 330 NM_021428 58239 Mm.353006 NM_021428 ENSMUSG00000038055 Dexi 1810029J14Rik|AI836170|AW413143|D16Bwg0586e|Myle dexamethasone-induced transcript protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-6 chr3 97937269 97937535 + 0.650819692678078 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 7229 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-11 chr9 66795094 66795327 + 0.650819692678078 NA intron (NM_177583, intron 1 of 5) CpG 213 NM_177583 208117 Mm.41291 NM_177583 ENSMUSG00000032375 Aph1b 2310057K14Rik|Aph1c aph1 homolog B, gamma secretase subunit protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078 chr13 75753425 75754082 + 0.650819692678078 NA intron (NM_138953, intron 4 of 11) intron (NM_138953, intron 4 of 11) 46269 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-5 chr15 59448351 59448664 + 0.650819692678078 NA intron (NM_001164604, intron 3 of 4) intron (NM_001164604, intron 3 of 4) 74309 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-2 chr16 97997578 97998142 + 0.650819692678078 NA intron (NM_001362093, intron 1 of 3) intron (NM_001362093, intron 1 of 3) 513 NR_130962 245305 Mm.148033 NM_001362093 B230307C23Rik 8030444G23Rik|EG245305 RIKEN cDNA B230307C23 gene protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-6 chr4 42953204 42953691 + 0.650819692678078 NA intron (NM_001355439, intron 3 of 4) intron (NM_001355439, intron 3 of 4) 3051 NM_001355440 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-6 chr2 157411655 157411889 + 0.650819692678078 NA Intergenic Intergenic -12521 NM_009271 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-2 chr10 75060895 75061111 + 0.650819692678078 NA 5' UTR (NM_001081412, exon 1 of 23) 5' UTR (NM_001081412, exon 1 of 23) 107 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-5 chr3 20057898 20058174 + 0.650819692678078 NA promoter-TSS (NR_105047) promoter-TSS (NR_105047) 225 NR_105046 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-9 chr6 67013560 67013867 + 0.650819692678078 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -22886 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-2 chr17 29993672 29994048 + 0.650819692678078 NA Intergenic Intergenic -11179 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-8 chr7 145106836 145107240 + 0.650819692678078 NA Intergenic MIRb|SINE|MIR 101081 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-3 chr19 40488622 40489053 + 0.650819692678078 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 24899 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-9 chr9 44319735 44320183 + 0.650819692678078 NA 5' UTR (NM_027909, exon 1 of 14) 5' UTR (NM_027909, exon 1 of 14) 323 NM_001359259 71764 Mm.491174 NM_027909 ENSMUSG00000032120 C2cd2l 1300006O23Rik|Tmem24 C2 calcium-dependent domain containing 2-like protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-4 chr2 174329585 174329949 + 0.650819692678078 NA promoter-TSS (NM_001077510) promoter-TSS (NM_001077510) -303 NM_201616 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding unique_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078 chr18 38385124 38385520 + 0.650819692678078 NA Intergenic Intergenic -33585 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-7 chr5 36460864 36461244 + 0.650819692678078 NA intron (NR_126490, intron 1 of 1) intron (NR_126490, intron 1 of 1) 3800 NR_126490 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-10 chr8 13688241 13688556 + 0.650819692678078 NA Intergenic Intergenic -10811 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078 chr1 33657924 33658246 + 0.650819692678078 NA intron (NM_008922, intron 5 of 13) intron (NM_008922, intron 5 of 13) 11709 NM_008922 19076 Mm.27705 NM_008922 ENSMUSG00000026134 Prim2 AI323589 DNA primase, p58 subunit protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-7 chr5 92368720 92368972 + 0.650819692678078 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -5550 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-7 chr4 135986827 135987097 + 0.650819692678078 NA exon (NM_025411, exon 1 of 6) exon (NM_025411, exon 1 of 6) 282 NM_025411 66193 Mm.29131 NM_025411 ENSMUSG00000028669 Pithd1 1110049F12Rik|AA408179|Trp26 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-5 chr2 164455075 164455450 + 0.650819692678078 NA Intergenic B1F1|SINE|Alu -5709 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-3 chr10 122886479 122886699 + 0.650819692678078 NA intron (NM_001110218, intron 6 of 9) intron (NM_001110218, intron 6 of 9) 99135 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-4 chr2 137694262 137694835 + 0.650819692678078 NA Intergenic Intergenic -562036 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-8 chr5 52741659 52742006 + 0.650819692678078 NA exon (NM_025951, exon 1 of 10) exon (NM_025951, exon 1 of 10) 258 NM_025951 67073 Mm.248647 NM_025951 ENSMUSG00000029186 Pi4k2b 2610042N09Rik|4933409G22Rik phosphatidylinositol 4-kinase type 2 beta protein-coding common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-8 chr5 114718820 114719082 + 0.650819692678078 NA promoter-TSS (NR_105995) promoter-TSS (NR_105995) -564 NR_105995 102465622 NR_105995 ENSMUSG00000098656 Mir7028 Gm27674|mmu-mir-7028 microRNA 7028 ncRNA common_peak2_28_16_0.494505159700172_4.33471542110042_0.650819692678078-4 chr13 24537189 24537556 + 0.650819692678078 NA Intergenic Intergenic -44817 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-3 chr19 47068715 47069065 + 0.650819692678078 NA intron (NM_177342, intron 1 of 10) intron (NM_177342, intron 1 of 10) 1142 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding common_peak1_28_16_0.494505159700172_4.33471542110042_0.650819692678078-9 chr8 34761379 34761679 + 0.650819692678078 NA Intergenic Intergenic -46081 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_82_54_0.306963907366258_5.93484166720779_0.650659218814807 chr15 102942961 102943378 + 0.650659218814807 NA TTS (NR_047528) TTS (NR_047528) 4777 NR_047528 100503872 Mm.383980 NR_047528 ENSMUSG00000086903 Hotair Gm16258 HOX transcript antisense RNA (non-protein coding) ncRNA common_peak2_65_68_-0.348513451953655_5.93426773080134_0.650659218814807-2 chr2 83644559 83645240 + 0.650659218814807 NA intron (NM_026934, intron 1 of 9) L1MDb|LINE|L1 321 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak1_65_68_-0.348513451953655_5.93426773080134_0.650659218814807 chr13 15807322 15808382 + 0.650659218814807 NA intron (NR_046131, intron 1 of 4) L2a|LINE|L2 609 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak2_65_68_-0.348513451953655_5.93426773080134_0.650659218814807 chr11 83302644 83303168 + 0.650659218814807 NA intron (NM_027915, intron 1 of 20) CpG 209 NM_001035854 71770 Mm.39053 NM_027915 ENSMUSG00000035152 Ap2b1 1300012O03Rik|AI788979|AP105B adaptor-related protein complex 2, beta 1 subunit protein-coding common_peak1_82_54_0.306963907366258_5.93484166720779_0.650659218814807 chr6 122811172 122812019 + 0.650659218814807 NA Intergenic CpG -8589 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak2_65_68_-0.348513451953655_5.93426773080134_0.650659218814807-3 chr7 4914893 4915731 + 0.650659218814807 NA promoter-TSS (NM_170759) promoter-TSS (NM_170759) 95 NM_170759 232816 Mm.27442 NM_170759 ENSMUSG00000074406 Zfp628 Zec|Znf628 zinc finger protein 628 protein-coding common_peak2_282_258_-0.171350479878132_7.93113304774749_0.650081164923657 chr18 67932205 67935058 + 0.650081164923657 NA intron (NM_172631, intron 1 of 5) CpG 458 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_111_110_-0.27682673170467_6.65600250049777_0.649787974766004 chr15 64311351 64312457 + 0.649787974766004 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 769 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_181_127_0.213087264882755_7.10654363244138_0.649594439796672 chr18 60747834 60749651 + 0.649594439796672 NA promoter-TSS (NM_008306) promoter-TSS (NM_008306) -77 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_61_39_0.348521444665419_5.49618881722007_0.649502410911277-4 chr9 64084644 64085221 + 0.649502410911277 NA intron (NR_040743, intron 1 of 2) CpG 4171 NR_040743 76814 Mm.243771 NR_040743 Scarletltr 2600006L11Rik Scarletltr, erythroid developmental long intergenic non-protein coding transcript ncRNA common_peak2_46_51_-0.426778414839037_5.48705051072157_0.649502410911277 chr11 79993291 79993878 + 0.649502410911277 NA exon (NM_001163018, exon 1 of 15) exon (NM_001163018, exon 1 of 15) 478 NM_199196 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 SUZ12 polycomb repressive complex 2 subunit protein-coding common_peak1_61_39_0.348521444665419_5.49618881722007_0.649502410911277 chr15 82015844 82016226 + 0.649502410911277 NA promoter-TSS (NM_010247) promoter-TSS (NM_010247) 185 NM_134095 28075 Mm.474453 NM_134095 ENSMUSG00000022472 Desi1 AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2 desumoylating isopeptidase 1 protein-coding common_peak2_46_51_-0.426778414839037_5.48705051072157_0.649502410911277-2 chr3 25143823 25144424 + 0.649502410911277 NA Intergenic CpG -360117 NM_001326288 635702 Mm.448351 NM_001326288 ENSMUSG00000102758 Naaladl2 2810043G22Rik|EG635702|Gm1021 N-acetylated alpha-linked acidic dipeptidase-like 2 protein-coding common_peak1_61_39_0.348521444665419_5.49618881722007_0.649502410911277-2 chr16 14158479 14159159 + 0.649502410911277 NA promoter-TSS (NR_030252) promoter-TSS (NR_030252) 455 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis regulator and mRNA stability 1 protein-coding common_peak2_61_39_0.348521444665419_5.49618881722007_0.649502410911277 chr19 6975406 6975807 + 0.649502410911277 NA intron (NM_008889, intron 1 of 3) CpG 558 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak1_61_39_0.348521444665419_5.49618881722007_0.649502410911277-5 chr9 79717756 79718608 + 0.649502410911277 NA intron (NM_001290308, intron 1 of 65) intron (NM_001290308, intron 1 of 65) 540 NM_001290308 12816 Mm.3819 NM_007730 ENSMUSG00000032332 Col12a1 - collagen, type XII, alpha 1 protein-coding common_peak1_46_51_-0.426778414839037_5.48705051072157_0.649502410911277 chr12 105001169 105001871 + 0.649502410911277 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -2843 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_61_39_0.348521444665419_5.49618881722007_0.649502410911277-3 chr2 120403330 120404058 + 0.649502410911277 NA promoter-TSS (NM_172672) promoter-TSS (NM_172672) -202 NM_172672 76051 Mm.38851 NM_172672 ENSMUSG00000062646 Ganc 5830445O15Rik|9330160A12|mFLJ00088 glucosidase, alpha; neutral C protein-coding common_peak2_1053_902_-0.0895067635291511_9.77382879571628_0.649436491128359 chr8 25097608 25103615 + 0.649436491128359 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 1200 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_87_88_-0.303613007942582_6.32392692699511_0.649046969219241 chr1 155088447 155089726 + 0.649046969219241 NA Intergenic Intergenic -5822 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_107_72_0.275667312446897_6.32765821510347_0.649046969219241 chr11 59505703 59506899 + 0.649046969219241 NA non-coding (NR_135273, exon 1 of 4) non-coding (NR_135273, exon 1 of 4) 339 NM_001291014 268417 Mm.239793 NM_172941 ENSMUSG00000020472 Zkscan17 Nizp1|Zfp496|Znf496 zinc finger with KRAB and SCAN domains 17 protein-coding common_peak1_107_72_0.275667312446897_6.32765821510347_0.649046969219241 chr3 104510976 104511880 + 0.649046969219241 NA intron (NM_001025067, intron 1 of 17) CpG 490 NM_001025067 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak2_164_115_0.214631928877578_6.96529695956636_0.64883713114111 chr15 73183662 73184842 + 0.64883713114111 NA intron (NM_153178, intron 1 of 18) CpG 695 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_165_115_0.223287646190102_6.96962481822262_0.64883713114111 chr16 33379924 33381459 + 0.64883713114111 NA promoter-TSS (NM_011749) promoter-TSS (NM_011749) 45 NR_045709 100502742 Mm.217880 NR_045709 ENSMUSG00000097318 1700007L15Rik linc-Iqcg|linc1609 RIKEN cDNA 1700007L15 gene ncRNA common_peak1_99_99_-0.288612307195661_6.49955003617689_0.648257320144384 chr1 93685614 93686626 + 0.648257320144384 NA intron (NM_016778, intron 1 of 4) CpG 545 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak2_99_99_-0.288612307195661_6.49955003617689_0.648257320144384 chr8 13338845 13339853 + 0.648257320144384 NA intron (NM_001358991, intron 1 of 12) CpG 545 NM_009361 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding common_peak1_120_82_0.2532713296294_6.50167509616162_0.64825732014436 chr8 94386531 94387475 + 0.64825732014436 NA intron (NM_001357205, intron 1 of 7) intron (NM_001357205, intron 1 of 7) 574 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_94_63_0.281765373725781_6.14088268686289_0.648198125309879-3 chr6 82041696 82042340 + 0.648198125309879 NA intron (NM_145570, intron 1 of 2) intron (NM_145570, intron 1 of 2) 390 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak1_94_63_0.281765373725781_6.14088268686289_0.648198125309879-4 chr9 78482015 78482641 + 0.648198125309879 NA promoter-TSS (NM_010106) promoter-TSS (NM_010106) -604 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_94_63_0.281765373725781_6.14088268686289_0.648198125309879 chr16 33185127 33185673 + 0.648198125309879 NA 5' UTR (NM_176840, exon 1 of 13) 5' UTR (NM_176840, exon 1 of 13) 329 NM_176840 106326 Mm.486405 NM_176840 ENSMUSG00000022807 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 protein-coding common_peak2_76_78_-0.322946296005914_6.14230760017415_0.648198125309879 chr10 77252161 77253031 + 0.648198125309879 NA Intergenic Intergenic 6627 NR_026944 100169878 Mm.420901 NR_026944 ENSMUSG00000078444 Gm10941 - predicted gene 10941 ncRNA common_peak2_76_78_-0.322946296005914_6.14230760017415_0.648198125309879-2 chr19 55740525 55741551 + 0.648198125309879 NA promoter-TSS (NM_001331147) promoter-TSS (NM_001331147) -772 NM_001331147 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_94_63_0.281765373725781_6.14088268686289_0.648198125309879 chr3 90212550 90213528 + 0.648198125309879 NA promoter-TSS (NM_001293741) promoter-TSS (NM_001293741) 608 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak1_94_63_0.281765373725781_6.14088268686289_0.648198125309879-2 chr17 66519059 66520087 + 0.648198125309879 NA promoter-TSS (NM_024448) promoter-TSS (NM_024448) 97 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-4 chr15 59680988 59681365 + 0.647723624534446 NA Intergenic Intergenic 32522 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446 chr1 180330652 180331073 + 0.647723624534446 NA promoter-TSS (NR_003623) promoter-TSS (NR_003623) -313 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-4 chr3 123754409 123755047 + 0.647723624534446 NA Intergenic Intergenic -63876 NR_121616 83398 Mm.443908 NM_031186 ENSMUSG00000027977 Ndst3 4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-11 chr3 104791143 104791483 + 0.647723624534446 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 2279 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-2 chr7 66340359 66340884 + 0.647723624534446 NA intron (NM_146191, intron 3 of 33) intron (NM_146191, intron 3 of 33) 41103 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-5 chr15 41447513 41447839 + 0.647723624534446 NA intron (NR_152565, intron 1 of 17) CpG 194 NM_001358978 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-10 chr7 112304628 112304951 + 0.647723624534446 NA intron (NM_001193305, intron 4 of 25) intron (NM_001193305, intron 4 of 25) -63519 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-12 chr4 64083676 64084005 + 0.647723624534446 NA Intergenic Intergenic -36825 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-6 chr17 59076767 59077466 + 0.647723624534446 NA Intergenic Intergenic -63794 NM_026497 67993 Mm.36507 NM_026497 ENSMUSG00000024228 Nudt12 0610016O18Rik nudix (nucleoside diphosphate linked moiety X)-type motif 12 protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-2 chr11 30954538 30954942 + 0.647723624534446 NA promoter-TSS (NM_025745) promoter-TSS (NM_025745) 342 NM_023906 65257 Mm.440539 NM_023906 ENSMUSG00000020305 Asb3 2400011J03Rik|Asb-3 ankyrin repeat and SOCS box-containing 3 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-5 chr16 49855803 49856096 + 0.647723624534446 NA intron (NM_010581, intron 1 of 9) CpG 295 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-17 chr7 80403645 80404069 + 0.647723624534446 NA intron (NM_001081454, intron 1 of 15) intron (NM_001081454, intron 1 of 15) -1045 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-8 chr2 122146812 122147237 + 0.647723624534446 NA promoter-TSS (NM_009735) promoter-TSS (NM_009735) -663 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-2 chr11 4276887 4277425 + 0.647723624534446 NA Intergenic Intergenic 10360 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_24_30_-0.584842468661323_4.66177507605621_0.647723624534446 chr10 99204035 99204380 + 0.647723624534446 NA Intergenic Intergenic -59024 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-3 chr15 37201050 37201581 + 0.647723624534446 NA Intergenic Intergenic -31721 NM_026496 252973 Mm.244612 NM_026496 ENSMUSG00000022286 Grhl2 0610015A08Rik|BOM|Tcfcp2l3|clft3 grainyhead like transcription factor 2 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-5 chr15 57976234 57976730 + 0.647723624534446 NA Intergenic Intergenic -9421 NM_173862 239463 Mm.221241 NM_173862 ENSMUSG00000051225 Fam83a - family with sequence similarity 83, member A protein-coding unique_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-2 chr12 86897675 86898263 + 0.647723624534446 NA Intergenic Intergenic -13155 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-14 chr4 115000187 115000590 + 0.647723624534446 NA intron (NM_001304551, intron 1 of 15) CpG 270 NM_001304555 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding unique_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446 chr11 104619500 104620223 + 0.647723624534446 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 11861 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-4 chr13 43481486 43481695 + 0.647723624534446 NA promoter-TSS (NM_019930) promoter-TSS (NM_019930) -617 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-8 chr5 139912035 139912365 + 0.647723624534446 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 4257 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-6 chr15 59522458 59523080 + 0.647723624534446 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -125885 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-7 chr4 109662143 109662582 + 0.647723624534446 NA intron (NM_007671, intron 1 of 1) intron (NM_007671, intron 1 of 1) 3010 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-4 chr12 85050913 85051227 + 0.647723624534446 NA intron (NM_001347421, intron 15 of 19) intron (NM_001347421, intron 15 of 19) 44545 NM_001361239 73422 Mm.311944 NM_175198 ENSMUSG00000042320 Prox2 1700058C01Rik prospero homeobox 2 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-7 chr4 139203725 139204186 + 0.647723624534446 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 9844 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-8 chr2 180033487 180033928 + 0.647723624534446 NA exon (NM_177727, exon 8 of 9) exon (NM_177727, exon 8 of 9) 8720 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-4 chr14 69088789 69089143 + 0.647723624534446 NA Intergenic Intergenic 59677 NM_009285 20855 Mm.20911 NM_009285 ENSMUSG00000014813 Stc1 Stc stanniocalcin 1 protein-coding unique_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446 chr10 99250006 99250801 + 0.647723624534446 NA Intergenic Intergenic -12828 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-8 chr5 115631440 115631782 + 0.647723624534446 NA promoter-TSS (NM_198163) promoter-TSS (NM_198163) 205 NR_027810 66123 Mm.133063 NM_021417 ENSMUSG00000107121 1110006O24Rik - RIKEN cDNA 1110006O24 gene ncRNA common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-3 chr12 70890445 70890858 + 0.647723624534446 NA intron (NM_028127, intron 10 of 13) intron (NM_028127, intron 10 of 13) -47206 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-11 chr8 94702979 94703325 + 0.647723624534446 NA Intergenic Intergenic -6910 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding unique_peak1_24_30_-0.584842468661323_4.66177507605621_0.647723624534446 chr6 89644081 89644351 + 0.647723624534446 NA exon (NM_001178058, exon 1 of 16) exon (NM_001178058, exon 1 of 16) 228 NM_001178059 232223 Mm.229332 NM_153162 ENSMUSG00000000811 Txnrd3 AI196535|TGR|TR2 thioredoxin reductase 3 protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-8 chrX 99530802 99531102 + 0.647723624534446 NA Intergenic Intergenic -60217 NM_008853 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-7 chr2 113455888 113456383 + 0.647723624534446 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 15071 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-9 chr5 135522827 135523168 + 0.647723624534446 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 22125 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446 chr10 18472035 18472464 + 0.647723624534446 NA intron (NM_001163592, intron 1 of 7) intron (NM_001163592, intron 1 of 7) 2268 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-5 chr19 42053076 42053705 + 0.647723624534446 NA 3' UTR (NM_025752, exon 1 of 1) 3' UTR (NM_025752, exon 1 of 1) 1162 NM_025752 66765 Mm.440412 NM_025752 ENSMUSG00000090369 4933411K16Rik - RIKEN cDNA 4933411K16 gene protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446 chr11 16591898 16592248 + 0.647723624534446 NA Intergenic Intergenic -83589 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-7 chr6 71271025 71271313 + 0.647723624534446 NA promoter-TSS (NM_145568) promoter-TSS (NM_145568) -502 NR_106192 102465900 NR_106192 ENSMUSG00000098623 Mir8112 Gm27739|mmu-mir-8112 microRNA 8112 ncRNA common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-6 chr16 36874589 36874776 + 0.647723624534446 NA 5' UTR (NM_134111, exon 1 of 6) 5' UTR (NM_134111, exon 1 of 6) 144 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding unique_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-3 chr19 4614761 4615250 + 0.647723624534446 NA 5' UTR (NM_153388, exon 1 of 3) 5' UTR (NM_153388, exon 1 of 3) 662 NM_153388 225875 Mm.329675 NM_153388 ENSMUSG00000045045 Lrfn4 BC023156|Salm3 leucine rich repeat and fibronectin type III domain containing 4 protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446 chr1 58722389 58723015 + 0.647723624534446 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) -7850 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-18 chrX 96097884 96098316 + 0.647723624534446 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 2055 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-9 chr3 88325525 88326037 + 0.647723624534446 NA exon (NM_020003, exon 2 of 6) exon (NM_020003, exon 2 of 6) 758 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-2 chr12 100520250 100520641 + 0.647723624534446 NA intron (NM_001033213, intron 1 of 19) CpG 377 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-3 chr12 81532447 81532837 + 0.647723624534446 NA intron (NM_001309814, intron 1 of 2) CpG 269 NM_001309847 105940408 NM_001309847 ENSMUSG00000021139 Gm20498 ARIP2a|Synj2bp-cox16 predicted gene 20498 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-2 chr12 5177301 5177640 + 0.647723624534446 NA intron (NM_001164493, intron 3 of 13) intron (NM_001164493, intron 3 of 13) 198212 NM_001164493 208439 Mm.388281 NM_001164493 ENSMUSG00000020627 Klhl29 A230106N14Rik|Gm68|Kbtbd9|mKIAA1921 kelch-like 29 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-10 chr7 44553598 44553836 + 0.647723624534446 NA intron (NM_001285517, intron 1 of 9) CpG-13068 248 NM_009473 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-13 chr4 89126589 89127179 + 0.647723624534446 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 1342 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-9 chr6 86471804 86472229 + 0.647723624534446 NA non-coding (NR_131125, exon 5 of 5) non-coding (NR_131125, exon 5 of 5) 8814 NR_131125 320486 Mm.391625 NR_131125 ENSMUSG00000085589 A430078I02Rik T25621 RIKEN cDNA A430078I02 gene ncRNA common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-3 chr15 25933521 25933858 + 0.647723624534446 NA intron (NM_001277318, intron 1 of 6) intron (NM_001277318, intron 1 of 6) 137 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-9 chr2 131210079 131210367 + 0.647723624534446 NA promoter-TSS (NM_001291032) promoter-TSS (NM_001291032) -137 NM_001291032 69596 Mm.2937 NM_027129 ENSMUSG00000068264 Ap5s1 0610038L13Rik|2310035K24Rik|AW060727|sigma5 adaptor-related protein 5 complex, sigma 1 subunit protein-coding unique_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-3 chr2 163813013 163813587 + 0.647723624534446 NA Intergenic Intergenic -7534 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-7 chr2 84528142 84528429 + 0.647723624534446 NA Intergenic Intergenic -21412 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-6 chr2 104711653 104712064 + 0.647723624534446 NA intron (NM_177190, intron 1 of 9) CpG 304 NM_177190 320554 Mm.249065 NM_177190 ENSMUSG00000027175 Tcp11l1 C130096D04Rik t-complex 11 like 1 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-10 chr3 96727812 96728080 + 0.647723624534446 NA promoter-TSS (NM_028925) promoter-TSS (NM_028925) 335 NM_026406 67845 Mm.386792 NM_026406 ENSMUSG00000028098 Rnf115 2610028E05Rik|AU042696|Zfp364 ring finger protein 115 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446 chr1 55130543 55131046 + 0.647723624534446 NA promoter-TSS (NM_025283) promoter-TSS (NM_025283) -451 NM_001310585 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding unique_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-2 chr16 24732766 24733331 + 0.647723624534446 NA intron (NM_001145954, intron 2 of 7) AT_rich|Low_complexity|Low_complexity 11193 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_35_21_0.432279630035407_4.675571433655_0.647723624534446-3 chr13 28931344 28931924 + 0.647723624534446 NA Intergenic Intergenic 22065 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-2 chr11 116580974 116581290 + 0.647723624534446 NA exon (NM_173755, exon 1 of 18) exon (NM_173755, exon 1 of 18) 315 NM_173755 217342 Mm.243950 NM_173755 ENSMUSG00000020802 Ube2o 9630022H21|B230113M03Rik|E2-230K|mKIAA1734 ubiquitin-conjugating enzyme E2O protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-5 chr17 6167434 6167991 + 0.647723624534446 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 29564 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-15 chr5 24425545 24425947 + 0.647723624534446 NA intron (NM_009207, intron 1 of 22) CpG 514 NM_009207 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding common_peak1_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-2 chr8 11322988 11323278 + 0.647723624534446 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -10307 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446 chr14 25504768 25505293 + 0.647723624534446 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -29409 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_25_30_-0.528658135931762_4.68986724242099_0.647723624534446-16 chr6 116338147 116338544 + 0.647723624534446 NA 5' UTR (NM_027920, exon 1 of 7) 5' UTR (NM_027920, exon 1 of 7) 323 NM_001302383 71779 Mm.27064 NM_027920 ENSMUSG00000025702 March8 1300017E09Rik|MARCH-VIII|Mir membrane-associated ring finger (C3HC4) 8 protein-coding common_peak2_24_30_-0.584842468661323_4.66177507605621_0.647723624534446-4 chr15 89356638 89356972 + 0.647723624534446 NA intron (NM_001115132, intron 1 of 19) intron (NM_001115132, intron 1 of 19) 1086 NM_001271601 52683 Mm.143167 NM_001115132 ENSMUSG00000008690 Ncaph2 - non-SMC condensin II complex, subunit H2 protein-coding common_peak2_35_21_0.432279630035407_4.675571433655_0.647723624534446-6 chr3 145648153 145648471 + 0.647723624534446 NA exon (NM_010516, exon 4 of 5) exon (NM_010516, exon 4 of 5) 1673 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_276_199_0.170903653541191_7.72930801654532_0.647453742461593 chr7 112022794 112025164 + 0.647453742461593 NA intron (NM_133758, intron 1 of 27) CpG 473 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-2 chr1 161435551 161435867 + 0.647240723060192 NA Intergenic Intergenic 40271 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding common_peak1_14_19_-0.684340570114989_3.97975780982987_0.647240723060192 chr1 86442741 86442989 + 0.647240723060192 NA Intergenic CpG 16536 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-3 chr11 4303793 4304100 + 0.647240723060192 NA Intergenic Intergenic 37150 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-6 chr2 70507694 70507999 + 0.647240723060192 NA promoter-TSS (NM_025744) promoter-TSS (NM_025744) -973 NM_025744 66748 Mm.423014 NM_025744 ENSMUSG00000075302 Erich2 4933404M02Rik glutamate rich 2 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-3 chr1 172499322 172499694 + 0.647240723060192 NA promoter-TSS (NM_178598) promoter-TSS (NM_178598) -738 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-12 chr8 61616972 61617316 + 0.647240723060192 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -25975 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-2 chr11 76374174 76374521 + 0.647240723060192 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 24794 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192 chr10 43751632 43751898 + 0.647240723060192 NA intron (NR_040581, intron 1 of 3) intron (NR_040581, intron 1 of 3) 5607 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-11 chr3 37884106 37884332 + 0.647240723060192 NA Intergenic Intergenic -14594 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192 chr11 113064229 113064471 + 0.647240723060192 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 137488 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-9 chr3 38257947 38258156 + 0.647240723060192 NA Intergenic Intergenic -49932 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-2 chr10 17550438 17550852 + 0.647240723060192 NA Intergenic Intergenic -172583 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-9 chr15 83446201 83446524 + 0.647240723060192 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 1518 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-18 chr9 102746446 102746688 + 0.647240723060192 NA intron (NR_033301, intron 1 of 3) intron (NR_033301, intron 1 of 3) 6919 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-4 chr2 20521042 20521257 + 0.647240723060192 NA intron (NM_001177630, intron 1 of 17) intron (NM_001177630, intron 1 of 17) 1636 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-3 chr12 70827541 70827909 + 0.647240723060192 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 2211 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-4 chr14 57761130 57761388 + 0.647240723060192 NA Intergenic Intergenic -15136 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-14 chr4 137641394 137641701 + 0.647240723060192 NA intron (NM_001355588, intron 22 of 26) intron (NM_001355588, intron 22 of 26) -23179 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-27 chr9 106378624 106378977 + 0.647240723060192 NA Intergenic Intergenic 10168 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-7 chr2 129186366 129186578 + 0.647240723060192 NA Intergenic Intergenic -5799 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 - expressed sequence AI847159 ncRNA common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-11 chr2 148476168 148476448 + 0.647240723060192 NA Intergenic Intergenic -32773 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-12 chr4 137509267 137509534 + 0.647240723060192 NA intron (NM_008305, intron 6 of 96) intron (NM_008305, intron 6 of 96) -28886 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-9 chr2 32681670 32681928 + 0.647240723060192 NA TTS (NM_010236) TTS (NM_010236) 5967 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-24 chr6 94640082 94640329 + 0.647240723060192 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -33790 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-7 chr2 110190044 110190288 + 0.647240723060192 NA Intergenic Intergenic 115559 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192 chr12 76538022 76538269 + 0.647240723060192 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 4585 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding unique_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192 chr3 102338392 102338688 + 0.647240723060192 NA Intergenic Intergenic 76135 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-3 chr17 71089524 71089858 + 0.647240723060192 NA intron (NM_001083934, intron 19 of 36) intron (NM_001083934, intron 19 of 36) 70134 NM_001083934 17929 Mm.4103 NM_010867 ENSMUSG00000024049 Myom1 D430047A17Rik myomesin 1 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192 chr1 43361008 43361329 + 0.647240723060192 NA Intergenic Intergenic -84583 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192 chr1 40224632 40224822 + 0.647240723060192 NA promoter-TSS (NM_008362) promoter-TSS (NM_008362) -353 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-6 chr16 23240568 23240843 + 0.647240723060192 NA intron (NM_001252505, intron 1 of 7) intron (NM_001252505, intron 1 of 7) 14684 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-16 chr18 78132501 78132804 + 0.647240723060192 NA intron (NM_001171011, intron 1 of 8) intron (NM_001171011, intron 1 of 8) -9226 NM_028122 108052 Mm.33832 NM_028122 ENSMUSG00000059336 Slc14a1 2610507K20Rik|3021401A05Rik|UT-B|Utb1 solute carrier family 14 (urea transporter), member 1 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-12 chr3 83842571 83842988 + 0.647240723060192 NA Intergenic Intergenic -1171 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-5 chr12 76541617 76542109 + 0.647240723060192 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 6062 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-7 chr17 68004367 68004712 + 0.647240723060192 NA promoter-TSS (NM_172964) promoter-TSS (NM_172964) -431 NM_172964 268970 Mm.9935 NM_172964 ENSMUSG00000024043 Arhgap28 AU044757|AW550892|E130310N06 Rho GTPase activating protein 28 protein-coding common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-7 chr2 126309439 126309629 + 0.647240723060192 NA Intergenic Intergenic 157393 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-8 chr15 74619196 74619620 + 0.647240723060192 NA intron (NM_001177437, intron 12 of 26) intron (NM_001177437, intron 12 of 26) 16910 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-6 chr16 20498912 20499144 + 0.647240723060192 NA exon (NM_172265, exon 1 of 16) exon (NM_172265, exon 1 of 16) 211 NM_172265 224045 Mm.233855 NM_172265 ENSMUSG00000003235 Eif2b5 C81315 eukaryotic translation initiation factor 2B, subunit 5 epsilon protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-15 chr9 47407376 47407690 + 0.647240723060192 NA Intergenic Intergenic -122637 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-14 chr17 27975994 27976300 + 0.647240723060192 NA intron (NM_181413, intron 2 of 24) intron (NM_181413, intron 2 of 24) 66841 NM_181413 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-17 chr9 47284153 47284444 + 0.647240723060192 NA Intergenic Intergenic -245872 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-11 chr16 91044739 91045245 + 0.647240723060192 NA promoter-TSS (NM_026110) promoter-TSS (NM_026110) -613 NR_152264 67367 Mm.347 NM_026110 ENSMUSG00000022974 Paxbp1 1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp PAX3 and PAX7 binding protein 1 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-18 chr2 5713652 5714062 + 0.647240723060192 NA intron (NM_001290374, intron 1 of 9) CpG 905 NM_001290374 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-10 chr4 136523301 136523944 + 0.647240723060192 NA intron (NM_024452, intron 2 of 4) B1F|SINE|Alu 53861 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-6 chr19 6920630 6920861 + 0.647240723060192 NA intron (NM_007953, intron 1 of 6) intron (NM_007953, intron 1 of 6) 1063 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-11 chr9 63758508 63758847 + 0.647240723060192 NA promoter-TSS (NM_016769) promoter-TSS (NM_016769) -683 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192 chr10 16996773 16997129 + 0.647240723060192 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 98831 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-14 chr7 4445184 4445517 + 0.647240723060192 NA intron (NM_175372, intron 1 of 6) intron (NM_175372, intron 1 of 6) 307 NM_175372 108841 Mm.413106 NM_175372 ENSMUSG00000008435 Rdh13 8430425D21Rik retinol dehydrogenase 13 (all-trans and 9-cis) protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-15 chr17 67125984 67126315 + 0.647240723060192 NA intron (NM_001357625, intron 2 of 32) intron (NM_001357625, intron 2 of 32) -99914 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-6 chr2 119972522 119972787 + 0.647240723060192 NA promoter-TSS (NM_011941) promoter-TSS (NM_011941) -45 NM_001355293 26390 Mm.330501 NM_011941 ENSMUSG00000033902 Mapkbp1 2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596 mitogen-activated protein kinase binding protein 1 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-4 chr12 35734193 35734444 + 0.647240723060192 NA Intergenic Intergenic -39200 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-8 chr4 126254404 126254751 + 0.647240723060192 NA intron (NM_001145970, intron 1 of 16) intron (NM_001145970, intron 1 of 16) 1742 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-9 chr3 131302609 131302895 + 0.647240723060192 NA exon (NM_027816, exon 1 of 5) exon (NM_027816, exon 1 of 5) 475 NM_027816 71519 Mm.473179 NM_027816 ENSMUSG00000027983 Cyp2u1 8430436A10Rik cytochrome P450, family 2, subfamily u, polypeptide 1 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-5 chr13 112771495 112771844 + 0.647240723060192 NA Intergenic (A)n|Simple_repeat|Simple_repeat -29108 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-16 chr5 125265158 125265362 + 0.647240723060192 NA Intergenic Intergenic 75834 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-7 chr15 52847869 52848158 + 0.647240723060192 NA Intergenic Intergenic 135568 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-4 chr13 104448812 104449118 + 0.647240723060192 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 161130 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-9 chr4 129377051 129377383 + 0.647240723060192 NA intron (NM_028603, intron 1 of 4) CpG 811 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-21 chr4 147985972 147986449 + 0.647240723060192 NA intron (NM_001287348, intron 1 of 2) intron (NM_001287348, intron 1 of 2) 422 NM_001287348 18158 Mm.2740 NM_008726 ENSMUSG00000029019 Nppb AA408272|BNF|BNP natriuretic peptide type B protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-2 chr1 169695859 169696297 + 0.647240723060192 NA TTS (NM_009063) TTS (NM_009063) 40577 NM_009063 19737 Mm.20954 NM_009063 ENSMUSG00000026678 Rgs5 1110070A02Rik regulator of G-protein signaling 5 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-22 chr4 151630180 151630630 + 0.647240723060192 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 231363 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak1_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-2 chr16 93712047 93712357 + 0.647240723060192 NA intron (NM_027293, intron 1 of 36) CpG 295 NM_027293 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-7 chr12 86877832 86878388 + 0.647240723060192 NA Intergenic Intergenic 6704 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-3 chr13 51018327 51018696 + 0.647240723060192 NA Intergenic Intergenic 82216 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-26 chr8 36993098 36993351 + 0.647240723060192 NA promoter-TSS (NM_001039220) promoter-TSS (NM_001039220) -351 NM_001039220 621080 Mm.373292 NM_001039220 ENSMUSG00000074384 AI429214 - expressed sequence AI429214 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-6 chr15 6277645 6277955 + 0.647240723060192 NA Intergenic Intergenic -21989 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-13 chr3 159884778 159884998 + 0.647240723060192 NA intron (NM_001356350, intron 2 of 12) intron (NM_001356350, intron 2 of 12) 45238 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-2 chr11 120957366 120957648 + 0.647240723060192 NA intron (NM_001038653, intron 5 of 5) intron (NM_001038653, intron 5 of 5) 8440 NM_001038654 80879 Mm.28632 NM_030696 ENSMUSG00000025161 Slc16a3 Mct3|Mct4 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-5 chr11 75654439 75654719 + 0.647240723060192 NA intron (NM_001080774, intron 1 of 31) intron (NM_001080774, intron 1 of 31) -1436 NM_001080775 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-15 chr9 92383606 92384018 + 0.647240723060192 NA Intergenic Intergenic -73566 NM_178711 235527 Mm.55289 NM_178711 ENSMUSG00000032377 Plscr4 AV245873 phospholipid scramblase 4 protein-coding common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-8 chr9 15239420 15239661 + 0.647240723060192 NA intron (NM_026955, intron 1 of 3) intron (NM_026955, intron 1 of 3) 495 NM_026955 69137 Mm.41396 NM_026955 ENSMUSG00000031937 Vstm5 2200002K05Rik V-set and transmembrane domain containing 5 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-8 chr3 121575023 121575295 + 0.647240723060192 NA Intergenic Intergenic -42815 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-6 chr12 79560561 79560915 + 0.647240723060192 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 263387 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-23 chr5 30104892 30105304 + 0.647240723060192 NA promoter-TSS (NM_001167879) promoter-TSS (NM_001167879) -98 NM_001167879 242915 Mm.332287 NM_001167879 ENSMUSG00000044576 Garem2 Fam59b|Gareml|Gm444 GRB2 associated regulator of MAPK1 subtype 2 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-11 chr3 98027363 98027685 + 0.647240723060192 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 13986 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-12 chr3 21626478 21626792 + 0.647240723060192 NA Intergenic Intergenic -450017 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-7 chr2 26903069 26903311 + 0.647240723060192 NA promoter-TSS (NM_009298) promoter-TSS (NM_009298) -303 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-16 chr9 107630752 107630984 + 0.647240723060192 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 4474 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-2 chr13 59934296 59934743 + 0.647240723060192 NA Intergenic Intergenic -95192 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-6 chr12 77647439 77647799 + 0.647240723060192 NA Intergenic Intergenic 237478 NM_001252616 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-13 chr4 86689738 86690298 + 0.647240723060192 NA Intergenic ID_B1|SINE|B4 -19959 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-5 chr14 116927165 116927537 + 0.647240723060192 NA intron (NM_011821, intron 1 of 8) intron (NM_011821, intron 1 of 8) 2054 NM_011821 23888 Mm.440025 NM_011821 ENSMUSG00000058571 Gpc6 - glypican 6 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-16 chr7 120835169 120835399 + 0.647240723060192 NA Intergenic Intergenic -7547 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-11 chr7 120835159 120835410 + 0.647240723060192 NA Intergenic Intergenic -7547 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-13 chr17 5800301 5800741 + 0.647240723060192 NA intron (NR_045080, intron 1 of 1) intron (NR_045080, intron 1 of 1) 1031 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-19 chr2 72389205 72389621 + 0.647240723060192 NA intron (NM_023057, intron 9 of 19) intron (NM_023057, intron 9 of 19) -86806 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-4 chr10 68267797 68268049 + 0.647240723060192 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 10803 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-13 chr8 106561342 106561683 + 0.647240723060192 NA Intergenic Intergenic -25631 NR_045470 68692 Mm.416843 NR_045470 ENSMUSG00000099139 1110028F18Rik - RIKEN cDNA 1110028F18 gene ncRNA common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-12 chr8 71315074 71315323 + 0.647240723060192 NA exon (NM_001142323, exon 3 of 39) exon (NM_001142323, exon 3 of 39) 42484 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-10 chr18 36286621 36286875 + 0.647240723060192 NA intron (NM_008989, intron 1 of 1) intron (NM_008989, intron 1 of 1) 5586 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-4 chr19 34698964 34699334 + 0.647240723060192 NA intron (NM_172838, intron 1 of 6) intron (NM_172838, intron 1 of 6) 47962 NM_172838 240638 Mm.74636 NM_172838 ENSMUSG00000009378 Slc16a12 3230401A21|AW210596 solute carrier family 16 (monocarboxylic acid transporters), member 12 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-19 chr9 120738697 120738947 + 0.647240723060192 NA Intergenic Intergenic 161491 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-2 chr10 81344626 81344858 + 0.647240723060192 NA Intergenic ID_B1|SINE|B4 -1476 NM_148951 209047 Mm.218755 NM_148951 ENSMUSG00000034872 Gipc3 Ahl5|Rgs19ip3 GIPC PDZ domain containing family, member 3 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-12 chr16 93918068 93918455 + 0.647240723060192 NA TTS (NM_019500) TTS (NM_019500) 11306 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-18 chr6 91440961 91441211 + 0.647240723060192 NA promoter-TSS (NR_045980) promoter-TSS (NR_045980) 99 NR_038153 69798 Mm.229265 NR_038153 ENSMUSG00000100680 1810044D09Rik - RIKEN cDNA 1810044D09 gene ncRNA common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-3 chr14 48120933 48121138 + 0.647240723060192 NA 5' UTR (NM_033602, exon 1 of 6) 5' UTR (NM_033602, exon 1 of 6) 166 NM_033602 93834 Mm.296457 NM_033602 ENSMUSG00000021846 Peli2 AW047589|BB129927 pellino 2 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192 chr1 93636013 93636330 + 0.647240723060192 NA promoter-TSS (NM_021537) promoter-TSS (NM_021537) -444 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-20 chr2 173250674 173250941 + 0.647240723060192 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 25726 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-17 chr6 72244809 72245221 + 0.647240723060192 NA Intergenic Intergenic -9438 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-4 chr13 67172889 67173324 + 0.647240723060192 NA promoter-TSS (NM_001013769) promoter-TSS (NM_001013769) -76 NM_001013769 380855 Mm.284988 NM_001013769 ENSMUSG00000058900 Rsl1 rslcan-9 regulator of sex limited protein 1 protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-10 chr8 22565747 22565947 + 0.647240723060192 NA intron (NM_011394, intron 10 of 10) intron (NM_011394, intron 10 of 10) 27966 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192 chr1 73936713 73937161 + 0.647240723060192 NA intron (NM_027884, intron 22 of 34) intron (NM_027884, intron 22 of 34) -72471 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-9 chr14 20201433 20201751 + 0.647240723060192 NA Intergenic Intergenic -19810 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-10 chr19 24707282 24707611 + 0.647240723060192 NA intron (NM_175013, intron 10 of 10) C-rich|Low_complexity|Low_complexity 33438 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-13 chr6 88966603 88966918 + 0.647240723060192 NA Intergenic Intergenic 64509 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-5 chr14 7860944 7861230 + 0.647240723060192 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 43130 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-2 chr8 25089335 25089545 + 0.647240723060192 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 12371 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-2 chr13 98012207 98012547 + 0.647240723060192 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 193788 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-14 chr9 57247686 57248060 + 0.647240723060192 NA intron (NM_001014398, intron 8 of 12) intron (NM_001014398, intron 8 of 12) 11317 NM_001014398 541610 Mm.378036 NM_001014398 ENSMUSG00000070298 Trcg1 - taste receptor cell gene 1 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-8 chr18 62179584 62179850 + 0.647240723060192 NA promoter-TSS (NM_001013754) promoter-TSS (NM_001013754) 264 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-8 chr17 84530432 84530669 + 0.647240723060192 NA intron (NM_001357987, intron 2 of 28) intron (NM_001357987, intron 2 of 28) 18655 NM_001357987 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-10 chr2 151978492 151978737 + 0.647240723060192 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 1605 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-7 chr17 35667045 35667302 + 0.647240723060192 NA TTS (NM_010364) TTS (NM_010364) 419 NM_175137 68915 Mm.32002 NM_175137 ENSMUSG00000038838 Vars2 1190004I24Rik|Vars2l|mKIAA1885 valyl-tRNA synthetase 2, mitochondrial protein-coding unique_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-14 chr8 124080294 124080606 + 0.647240723060192 NA Intergenic Intergenic 56977 NM_001029876 382038 Mm.334891 NM_001029876 ENSMUSG00000031976 Urb2 C77575|mKIAA0133 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-3 chr11 88161772 88162087 + 0.647240723060192 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -7636 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-9 chr19 22699129 22699522 + 0.647240723060192 NA intron (NM_001035239, intron 3 of 24) intron (NM_001035239, intron 3 of 24) 6706 NM_001035244 226025 Mm.131943 NM_177341 ENSMUSG00000052387 Trpm3 6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2 transient receptor potential cation channel, subfamily M, member 3 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-17 chr19 44745162 44745537 + 0.647240723060192 NA Intergenic ID4_|SINE|ID -12045 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-5 chr14 76537318 76537806 + 0.647240723060192 NA intron (NM_001360048, intron 2 of 2) URR1B|DNA|hAT-Charlie -16707 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-11 chr7 128523255 128523491 + 0.647240723060192 NA promoter-TSS (NM_013863) promoter-TSS (NM_013863) -210 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-8 chr13 44731774 44732140 + 0.647240723060192 NA intron (NM_001205043, intron 1 of 17) intron (NM_001205043, intron 1 of 17) 686 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-3 chr13 60936335 60936527 + 0.647240723060192 NA intron (NM_007796, intron 1 of 4) intron (NM_007796, intron 1 of 4) 135 NM_001145799 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-10 chr14 33312189 33312444 + 0.647240723060192 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 95493 NM_153800 239027 Mm.318350 NM_153800 ENSMUSG00000063506 Arhgap22 B230341L19Rik|RHOGAP2|p68RacGAP Rho GTPase activating protein 22 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-15 chr7 116245938 116246261 + 0.647240723060192 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -8323 NM_001305186 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-4 chr12 76538024 76538246 + 0.647240723060192 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 4575 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding unique_peak1_22_12_0.549468563228407_3.9751739997553_0.647240723060192-25 chr6 148945871 148946174 + 0.647240723060192 NA non-coding (NR_144294, exon 1 of 2) non-coding (NR_144294, exon 1 of 2) 448 NM_019643 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding unique_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-5 chr19 53483136 53483480 + 0.647240723060192 NA Intergenic Intergenic -18512 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-8 chr2 77269785 77270054 + 0.647240723060192 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 10673 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding common_peak1_13_19_-0.783174021522193_3.93034108412627_0.647240723060192-5 chr2 60691063 60691264 + 0.647240723060192 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -17470 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_22_12_0.549468563228407_3.9751739997553_0.647240723060192-10 chr7 99828065 99828324 + 0.647240723060192 NA 5' UTR (NM_016720, exon 1 of 3) 5' UTR (NM_016720, exon 1 of 3) 223 NM_016720 50877 Mm.103703 NM_016720 ENSMUSG00000035239 Neu3 - neuraminidase 3 protein-coding common_peak2_14_19_-0.684340570114989_3.97975780982987_0.647240723060192-15 chr5 110879996 110880317 + 0.647240723060192 NA intron (NM_001267622, intron 1 of 22) CpG 353 NM_001267622 209683 Mm.295660 NM_024477 ENSMUSG00000033209 Ttc28 2310015L07Rik|6030435N04|AI428795|AI851761|BC002262|TPRBK tetratricopeptide repeat domain 28 protein-coding common_peak2_182_128_0.209709436533832_7.11608197369017_0.647072872090464 chr2 32628603 32629948 + 0.647072872090464 NA promoter-TSS (NM_021515) promoter-TSS (NM_021515) -225 NM_021515 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding common_peak2_126_123_-0.256556688812959_6.82591796598039_0.646765422667888-2 chr9 37488684 37490023 + 0.646765422667888 NA promoter-TSS (NM_146222) promoter-TSS (NM_146222) 32 NM_146222 235184 Mm.127892 NM_146222 ENSMUSG00000042138 Msantd2 2810450G17Rik|9530092B10Rik Myb/SANT-like DNA-binding domain containing 2 protein-coding common_peak2_126_123_-0.256556688812959_6.82591796598039_0.646765422667888 chr19 40461929 40463088 + 0.646765422667888 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -11110 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_150_104_0.231352386590917_6.82992171096158_0.646765422667863 chr14 49065679 49067052 + 0.646765422667863 NA promoter-TSS (NM_144535) promoter-TSS (NM_144535) -184 NM_001360070 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding common_peak1_135_93_0.241132046512326_6.6751548749338_0.64635981706779-2 chr3 107331942 107333040 + 0.64635981706779 NA exon (NM_001045807, exon 1 of 2) exon (NM_001045807, exon 1 of 2) 798 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak1_135_93_0.241132046512326_6.6751548749338_0.64635981706779 chr14 99323714 99325316 + 0.64635981706779 NA Intergenic Intergenic 25824 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_189_178_-0.209105383111718_7.3792630857084_0.646262421543455 chr1 43097501 43099451 + 0.646262421543455 NA promoter-TSS (NM_133818) promoter-TSS (NM_133818) 152 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak2_66_69_-0.347729999304579_5.95541801729268_0.644995680934529 chr15 99363001 99363885 + 0.644995680934529 NA intron (NM_001310622, intron 1 of 25) RSINE1|SINE|B4 7039 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_66_69_-0.347729999304579_5.95541801729268_0.644995680934529 chrX 96121252 96121825 + 0.644995680934529 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 25493 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_83_55_0.298124794388532_5.95641731925187_0.644995680934529-2 chr4 89428247 89429017 + 0.644995680934529 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -117600 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_66_69_-0.347729999304579_5.95541801729268_0.644995680934529-2 chr5 24384640 24385401 + 0.644995680934529 NA TTS (NM_008713) TTS (NM_008713) 7123 NM_001002897 213948 Mm.332252 NM_001002897 ENSMUSG00000038295 Atg9b Apg912|Apg9l2|Apgdc2|Gm574|Nos3as|eONE|sONE autophagy related 9B protein-coding common_peak2_83_55_0.298124794388532_5.95641731925187_0.644995680934529 chr10 24464323 24465615 + 0.644995680934529 NA Intergenic Intergenic -130473 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_238_170_0.185533801664396_7.5106194157181_0.644897009867296 chr8 88361060 88362575 + 0.644897009867296 NA intron (NM_012047, intron 1 of 16) CpG 374 NM_012047 26992 Mm.5400 NM_012047 ENSMUSG00000031660 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 protein-coding common_peak2_72_47_0.319452934844771_5.74468896814354_0.644849665389898 chr16 45072440 45073031 + 0.644849665389898 NA Intergenic Intergenic -21276 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_72_47_0.319452934844771_5.74468896814354_0.644849665389898 chr11 112782354 112783073 + 0.644849665389898 NA exon (NM_011448, exon 1 of 3) exon (NM_011448, exon 1 of 3) 503 NM_011448 20682 Mm.286407 NM_011448 ENSMUSG00000000567 Sox9 2010306G03Rik|AV220920|mKIAA4243 SRY (sex determining region Y)-box 9 protein-coding common_peak1_72_47_0.319452934844771_5.74468896814354_0.644849665389898-2 chr15 10769737 10770553 + 0.644849665389898 NA TTS (NR_045064) TTS (NR_045064) 55245 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak1_56_60_-0.380738280790285_5.74036819716774_0.644849665389898 chr10 79668993 79669772 + 0.644849665389898 NA promoter-TSS (NM_148934) promoter-TSS (NM_148934) -28 NM_148934 110012 Mm.22623 NM_148934 ENSMUSG00000020308 Tpgs1 AV005629|Gm16517|Gtrgeo22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding common_peak2_72_47_0.319452934844771_5.74468896814354_0.644849665389898-4 chr6 31077744 31078693 + 0.644849665389898 NA Intergenic Intergenic -15125 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_56_60_-0.380738280790285_5.74036819716774_0.644849665389898-4 chr8 22539185 22539974 + 0.644849665389898 NA intron (NM_011394, intron 3 of 10) intron (NM_011394, intron 3 of 10) 54234 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_72_47_0.319452934844771_5.74468896814354_0.644849665389898-3 chr2 151008693 151009380 + 0.644849665389898 NA intron (NM_207204, intron 1 of 23) CpG 362 NM_207204 78177 Mm.120911 NM_207204 ENSMUSG00000068115 Ninl 4930519N13Rik|Gm1004|Gm1634|mKIAA0980 ninein-like protein-coding common_peak2_72_47_0.319452934844771_5.74468896814354_0.644849665389898-2 chr2 117748480 117749390 + 0.644849665389898 NA Intergenic Intergenic 63867 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_56_60_-0.380738280790285_5.74036819716774_0.644849665389898-2 chr2 13372662 13373550 + 0.644849665389898 NA intron (NM_001081084, intron 31 of 66) intron (NM_001081084, intron 31 of 66) -101691 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak2_72_47_0.319452934844771_5.74468896814354_0.644849665389898-3 chr4 134659616 134660463 + 0.644849665389898 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 44251 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_56_60_-0.380738280790285_5.74036819716774_0.644849665389898 chr11 64079165 64079915 + 0.644849665389898 NA promoter-TSS (NR_033780) promoter-TSS (NR_033780) 56 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak2_56_60_-0.380738280790285_5.74036819716774_0.644849665389898-5 chr8 103373834 103374343 + 0.644849665389898 NA Intergenic Intergenic -26554 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_56_60_-0.380738280790285_5.74036819716774_0.644849665389898-3 chr2 32167066 32167855 + 0.644849665389898 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 16312 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_72_47_0.319452934844771_5.74468896814354_0.644849665389898-4 chr5 24820518 24821455 + 0.644849665389898 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 21375 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_88_89_-0.303545869929748_6.3400801613648_0.64473631751325 chr10 18022066 18023152 + 0.64473631751325 NA intron (NM_028440, intron 1 of 2) CpG 481 NM_001359560 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_88_89_-0.303545869929748_6.3400801613648_0.64473631751325 chr13 42303464 42304578 + 0.64473631751325 NA intron (NM_010104, intron 2 of 4) intron (NM_010104, intron 2 of 4) 2545 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak2_88_89_-0.303545869929748_6.3400801613648_0.64473631751325-2 chr9 123243354 123244715 + 0.64473631751325 NA Intergenic Intergenic 16755 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding common_peak1_108_73_0.269241519499496_6.3440741253787_0.64473631751325 chr9 109931980 109932796 + 0.64473631751325 NA intron (NM_001205332, intron 1 of 17) CpG 614 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding common_peak2_183_129_0.206375529621312_7.12555557783911_0.644587559536362-2 chr5 148994477 148996550 + 0.644587559536362 NA promoter-TSS (NR_102383) promoter-TSS (NR_102383) -298 NR_102384 319982 Mm.33303 NR_102383 ENSMUSG00000106951 5930430L01Rik - RIKEN cDNA 5930430L01 gene ncRNA common_peak2_183_129_0.206375529621312_7.12555557783911_0.644587559536362 chr15 89355008 89356253 + 0.644587559536362 NA promoter-TSS (NM_001271601) promoter-TSS (NM_001271601) 29 NM_178919 105847 Mm.34511 NM_178919 ENSMUSG00000022614 Lmf2 AI451006|Tmem112b|Tmem153 lipase maturation factor 2 protein-coding common_peak1_100_100_-0.288713583494381_6.5138546910046_0.644451448718123 chr2 117472363 117473420 + 0.644451448718123 NA Intergenic Intergenic -130014 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak2_101_100_-0.274600002761133_6.52091148137123_0.644451448718123-2 chr18 67640633 67641936 + 0.644451448718123 NA promoter-TSS (NM_134138) promoter-TSS (NM_134138) 71 NM_001357523 225659 Mm.111928 NM_001081073 ENSMUSG00000073542 Cep76 6230425F05Rik|9630013E05 centrosomal protein 76 protein-coding common_peak2_101_100_-0.274600002761133_6.52091148137123_0.644451448718123 chr16 24491137 24492567 + 0.644451448718123 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -37462 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_121_83_0.247783666950872_6.5162092562542_0.644451448718099 chr16 91547066 91547986 + 0.644451448718099 NA intron (NM_008338, intron 1 of 6) intron (NM_008338, intron 1 of 6) 432 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_121_83_0.247783666950872_6.5162092562542_0.644451448718099 chr11 96286701 96287801 + 0.644451448718099 NA intron (NM_010460, intron 1 of 1) CpG 605 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak1_456_405_-0.133363754379426_8.59865403999546_0.644379499587571 chr4 45488658 45492253 + 0.644379499587571 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 40373 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_483_428_-0.130633035669709_8.67951731966469_0.644338895137945 chr17 23674025 23677484 + 0.644338895137945 NA TTS (NM_181821) TTS (NM_181821) 1695 NM_001161746 27279 Mm.28518 NM_013749 ENSMUSG00000023905 Tnfrsf12a AI255180|C87282|Fn14|HPIP|TWEAK-R|TweakR tumor necrosis factor receptor superfamily, member 12a protein-coding common_peak1_191_179_-0.202142388604157_7.3907819020276_0.644198074451427 chr7 80401329 80402504 + 0.644198074451427 NA intron (NM_001081454, intron 1 of 15) CpG 896 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_219_156_0.190101593312824_7.38967154554804_0.644198074451427 chr3 95314675 95316337 + 0.644198074451427 NA intron (NM_029789, intron 1 of 10) CpG 316 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_309_281_-0.163554873238621_8.05777391577948_0.643827443679639 chr4 128727672 128730789 + 0.643827443679639 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 1659 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic 2 protein-coding common_peak2_127_124_-0.256909179164023_6.83732969508008_0.643738909342027 chr2 180966797 180968278 + 0.643738909342027 NA 5' UTR (NM_001177706, exon 1 of 12) 5' UTR (NM_001177706, exon 1 of 12) 237 NM_001177706 228998 Mm.33765 NM_145760 ENSMUSG00000027575 Arfgap1 AI115377|Arf1gap ADP-ribosylation factor GTPase activating protein 1 protein-coding common_peak1_128_124_-0.245761131798444_6.84290371876286_0.643738909342027 chr7 28375268 28377192 + 0.643738909342027 NA TTS (NM_011756) TTS (NM_011756) 2998 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_128_124_-0.245761131798444_6.84290371876286_0.643738909342027 chr17 71474442 71475966 + 0.643738909342027 NA 5' UTR (NM_028887, exon 1 of 48) 5' UTR (NM_028887, exon 1 of 48) 139 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak2_128_124_-0.245761131798444_6.84290371876286_0.643738909342027-2 chr2 180041775 180042893 + 0.643738909342027 NA promoter-TSS (NM_178750) promoter-TSS (NM_178750) 130 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding common_peak2_53_33_0.38508400964982_5.28000484607525_0.643431604871956 chr1 177014616 177015048 + 0.643431604871956 NA intron (NM_001357390, intron 18 of 18) intron (NM_001357390, intron 18 of 18) -178699 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak2_53_33_0.38508400964982_5.28000484607525_0.643431604871956-5 chr5 96160919 96161393 + 0.643431604871956 NA intron (NM_144910, intron 1 of 11) CpG 391 NM_001285511 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956-5 chr2 102899313 102899925 + 0.643431604871956 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 2046 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956 chr13 74462484 74463553 + 0.643431604871956 NA Intergenic Intergenic 30932 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-8 chr9 88274476 88275100 + 0.643431604871956 NA Intergenic Intergenic -52821 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_39_44_-0.449211132931245_5.26724752986405_0.643431604871956-3 chr4 119095575 119096378 + 0.643431604871956 NA Intergenic Intergenic -12769 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_52_33_0.358307214019521_5.2666164482601_0.643431604871956 chr1 16227231 16227904 + 0.643431604871956 NA Intergenic Intergenic 121685 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956 chr10 86101237 86101895 + 0.643431604871956 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 5712 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_39_44_-0.449211132931245_5.26724752986405_0.643431604871956 chr13 73604189 73604811 + 0.643431604871956 NA intron (NM_146047, intron 1 of 16) intron (NM_146047, intron 1 of 16) 498 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-7 chr4 143412366 143413194 + 0.643431604871956 NA 5' UTR (NM_001355724, exon 1 of 4) 5' UTR (NM_001355724, exon 1 of 4) 354 NM_001355724 242736 Mm.275953 NM_172877 ENSMUSG00000046862 Pramef8 4732496O08Rik|AU023234 PRAME family member 8 protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-3 chr15 76203540 76204031 + 0.643431604871956 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 2536 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956-3 chr18 35889461 35890170 + 0.643431604871956 NA Intergenic CpG 35128 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-5 chr17 27907082 27907582 + 0.643431604871956 NA intron (NM_026836, intron 2 of 5) intron (NM_026836, intron 2 of 5) 1910 NM_026836 68776 Mm.267998 NM_026836 ENSMUSG00000024218 Taf11 1110038O14Rik|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding common_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956 chr10 24593579 24594033 + 0.643431604871956 NA Intergenic Intergenic -1636 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_39_44_-0.449211132931245_5.26724752986405_0.643431604871956-5 chr9 44773147 44773600 + 0.643431604871956 NA intron (NM_023831, intron 1 of 11) intron (NM_023831, intron 1 of 11) 364 NM_023831 76568 Mm.278597 NM_023831 ENSMUSG00000002031 Ift46 1500035H01Rik|AA408110|AI663846|R75047|c11orf2 intraflagellar transport 46 protein-coding unique_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956 chr15 76655780 76656539 + 0.643431604871956 NA intron (NM_019396, intron 2 of 4) intron (NM_019396, intron 2 of 4) 735 NM_001357882 54151 Mm.247752 NM_019396 ENSMUSG00000053929 Cyhr1 1110031M01Rik|AU042374|Chrp cysteine and histidine rich 1 protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-6 chr2 102764148 102764783 + 0.643431604871956 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -17705 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak2_52_33_0.358307214019521_5.2666164482601_0.643431604871956-3 chr8 119728570 119729276 + 0.643431604871956 NA intron (NM_026922, intron 6 of 26) intron (NM_026922, intron 6 of 26) 28914 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-9 chr9 124311709 124312611 + 0.643431604871956 NA intron (NM_001243117, intron 1 of 4) intron (NM_001243117, intron 1 of 4) 534 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_39_44_-0.449211132931245_5.26724752986405_0.643431604871956 chr3 37723574 37724029 + 0.643431604871956 NA intron (NM_198657, intron 1 of 2) intron (NM_198657, intron 1 of 2) 559 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956-6 chr6 37432884 37433533 + 0.643431604871956 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 8940 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_52_33_0.358307214019521_5.2666164482601_0.643431604871956-2 chr10 10557660 10558142 + 0.643431604871956 NA exon (NM_026405, exon 1 of 3) exon (NM_026405, exon 1 of 3) 306 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding common_peak2_39_44_-0.449211132931245_5.26724752986405_0.643431604871956-2 chr4 84545425 84545844 + 0.643431604871956 NA intron (NM_172870, intron 2 of 5) CpG 129452 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-4 chr15 102997697 102998631 + 0.643431604871956 NA Intergenic Intergenic 7625 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding common_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956-4 chr2 13450381 13450953 + 0.643431604871956 NA intron (NM_001081084, intron 17 of 66) intron (NM_001081084, intron 17 of 66) 41209 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_53_33_0.38508400964982_5.28000484607525_0.643431604871956-2 chr13 43171184 43171855 + 0.643431604871956 NA promoter-TSS (NM_025935) promoter-TSS (NM_025935) -18 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_39_44_-0.449211132931245_5.26724752986405_0.643431604871956-4 chr4 155178764 155179267 + 0.643431604871956 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 43520 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_53_33_0.38508400964982_5.28000484607525_0.643431604871956-3 chr15 81928187 81928885 + 0.643431604871956 NA Intergenic Intergenic -2323 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_53_33_0.38508400964982_5.28000484607525_0.643431604871956-2 chr13 108228505 108229065 + 0.643431604871956 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 14381 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak2_53_33_0.38508400964982_5.28000484607525_0.643431604871956-4 chr4 22357614 22358122 + 0.643431604871956 NA intron (NM_172988, intron 1 of 8) CpG 325 NR_104380 269514 Mm.40708 NM_172988 ENSMUSG00000040410 Fbxl4 AI836810|FBL4|FBL5 F-box and leucine-rich repeat protein 4 protein-coding common_peak1_52_33_0.358307214019521_5.2666164482601_0.643431604871956-2 chr11 22981995 22982541 + 0.643431604871956 NA promoter-TSS (NM_144514) promoter-TSS (NM_144514) 16 NM_144514 17846 Mm.259903 NM_144514 ENSMUSG00000051355 Commd1 AI256843|Murr1|U2/Mu COMM domain containing 1 protein-coding common_peak1_167_117_0.215781687511051_6.99053389311737_0.643348397579587 chr19 3707756 3709502 + 0.643348397579587 NA intron (NM_001358257, intron 1 of 3) CpG 218 NM_001358257 72056 Mm.23780 NM_028077 ENSMUSG00000035372 1810055G02Rik AI256204 RIKEN cDNA 1810055G02 gene protein-coding common_peak2_142_137_-0.240905903517036_6.98807150501965_0.643348397579587 chr3 88949690 88951612 + 0.643348397579587 NA promoter-TSS (NM_022994) promoter-TSS (NM_022994) -369 NM_001164533 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding common_peak2_95_64_0.274397874270308_6.15956675016361_0.643324565023122 chr7 66178735 66180170 + 0.643324565023122 NA Intergenic Intergenic 69937 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_95_64_0.274397874270308_6.15956675016361_0.643324565023122-2 chr7 64277390 64278626 + 0.643324565023122 NA Intergenic Intergenic -9662 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_96_64_0.289242741382624_6.16698918371977_0.643324565023122-3 chr6 137735111 137735811 + 0.643324565023122 NA exon (NM_011499, exon 1 of 10) exon (NM_011499, exon 1 of 10) 379 NM_011499 20901 Mm.22584 NM_011499 ENSMUSG00000030224 Strap AW557906|C78091|C79202|Unrip serine/threonine kinase receptor associated protein protein-coding common_peak2_96_64_0.289242741382624_6.16698918371977_0.643324565023122 chr10 80100388 80101109 + 0.643324565023122 NA intron (NM_001359637, intron 1 of 3) intron (NM_001359637, intron 1 of 3) 439 NM_001359635 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_96_64_0.289242741382624_6.16698918371977_0.643324565023122-2 chr15 80437384 80438643 + 0.643324565023122 NA intron (NR_155274, intron 1 of 2) intron (NR_155274, intron 1 of 2) 590 NR_155275 102633578 Mm.397484 NR_155274 ENSMUSG00000115888 Gm31369 - predicted gene, 31369 ncRNA common_peak1_95_64_0.274397874270308_6.15956675016361_0.643324565023122 chr13 3538187 3538813 + 0.643324565023122 NA intron (NM_008112, intron 1 of 10) CpG 425 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak1_77_79_-0.322609297778039_6.16062344599834_0.643324565023122 chr7 4792992 4794053 + 0.643324565023122 NA exon (NM_009081, exon 3 of 5) exon (NM_009081, exon 3 of 5) 557 NM_009081 19943 Mm.379002 NM_009081 ENSMUSG00000030432 Rpl28 D7Wsu21e ribosomal protein L28 protein-coding common_peak1_77_79_-0.322609297778039_6.16062344599834_0.643324565023122-2 chr7 45813553 45814278 + 0.643324565023122 NA intron (NM_011181, intron 1 of 11) CpG 401 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding common_peak1_96_64_0.289242741382624_6.16698918371977_0.643324565023122 chr15 76899236 76900721 + 0.643324565023122 NA promoter-TSS (NM_025536) promoter-TSS (NM_025536) 37 NM_025536 66398 Mm.291716 NM_025536 ENSMUSG00000055041 Commd5 2310065H03Rik|AI854466|D15Ertd81e|Hcarg COMM domain containing 5 protein-coding common_peak1_96_64_0.289242741382624_6.16698918371977_0.643324565023122-2 chr15 89122303 89123111 + 0.643324565023122 NA TTS (NR_028449) TTS (NR_028449) 443 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak1_136_94_0.236359965784832_6.68803559122336_0.642998483830447 chr12 98736503 98738240 + 0.642998483830447 NA promoter-TSS (NM_001146199) promoter-TSS (NM_001146199) 34 NM_001146199 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding common_peak1_114_112_-0.264723741438299_6.68781709169604_0.642998483830422 chr6 83054695 83055608 + 0.642998483830422 NA promoter-TSS (NM_019752) promoter-TSS (NM_019752) -580 NM_019752 64704 Mm.21880 NM_019752 ENSMUSG00000068329 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 protein-coding common_peak2_114_112_-0.264723741438299_6.68781709169604_0.642998483830422 chr3 121651514 121653154 + 0.642998483830422 NA Intergenic Intergenic -5881 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_311_282_-0.159449404869045_8.06493354039736_0.642544698078421 chr15 62285282 62288711 + 0.642544698078421 NA Intergenic Intergenic -67545 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_184_130_0.203084679127381_7.13496534110114_0.642137725072615 chr10 111507507 111509267 + 0.642137725072615 NA 3' UTR (NM_009344, exon 2 of 2) 3' UTR (NM_009344, exon 2 of 2) 2101 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_158_151_-0.228376835519514_7.13373909568383_0.642137725072615 chr7 90442832 90444390 + 0.642137725072615 NA exon (NM_145151, exon 1 of 1) exon (NM_145151, exon 1 of 1) 830 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding common_peak1_62_40_0.33581829362875_5.52546115143246_0.641883003087205-2 chr2 117838793 117839726 + 0.641883003087205 NA intron (NR_040631, intron 2 of 5) intron (NR_040631, intron 2 of 5) 17331 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_47_52_-0.424099787691193_5.5158705607176_0.641883003087205-2 chr5 3647412 3648025 + 0.641883003087205 NA 5' UTR (NM_026033, exon 1 of 5) 5' UTR (NM_026033, exon 1 of 5) 218 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|Odag GATA zinc finger domain containing 1 protein-coding common_peak2_48_52_-0.394562311197144_5.53063929896463_0.641883003087205 chr7 67645485 67646095 + 0.641883003087205 NA promoter-TSS (NM_175124) promoter-TSS (NM_175124) -554 NR_028143 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_47_52_-0.424099787691193_5.5158705607176_0.641883003087205 chr19 10603460 10603883 + 0.641883003087205 NA intron (NM_145496, intron 1 of 16) intron (NM_145496, intron 1 of 16) 587 NM_145496 225913 Mm.374868 NM_145496 ENSMUSG00000034371 Tkfc BC021917|Dak triokinase, FMN cyclase protein-coding common_peak1_62_40_0.33581829362875_5.52546115143246_0.641883003087205 chr12 99351993 99352943 + 0.641883003087205 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 97606 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_48_52_-0.394562311197144_5.53063929896463_0.641883003087205 chr1 64932241 64933127 + 0.641883003087205 NA intron (NM_001039493, intron 2 of 7) B3|SINE|B2 24140 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_62_40_0.33581829362875_5.52546115143246_0.641883003087205-3 chr9 50856979 50857601 + 0.641883003087205 NA intron (NM_001286553, intron 1 of 16) CpG 366 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_47_52_-0.424099787691193_5.5158705607176_0.641883003087205-4 chr7 80900750 80901603 + 0.641883003087205 NA promoter-TSS (NR_027976) promoter-TSS (NR_027976) 93 NR_152101 71968 Mm.274226 NM_028026 ENSMUSG00000025722 Wdr73 1200011I23Rik|2410008B13Rik|AI848574|C85352 WD repeat domain 73 protein-coding common_peak2_48_52_-0.394562311197144_5.53063929896463_0.641883003087205-2 chr8 122166495 122167357 + 0.641883003087205 NA Intergenic Intergenic -115215 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_62_40_0.33581829362875_5.52546115143246_0.641883003087205-2 chr3 66985776 66986278 + 0.641883003087205 NA promoter-TSS (NM_001356273) promoter-TSS (NM_001356273) 60 NM_001356273 66880 Mm.316418 NM_025822 ENSMUSG00000034544 Rsrc1 1200013F24Rik|SRrp53 arginine/serine-rich coiled-coil 1 protein-coding common_peak1_47_52_-0.424099787691193_5.5158705607176_0.641883003087205 chr12 17420649 17421414 + 0.641883003087205 NA intron (NM_001008421, intron 19 of 20) intron (NM_001008421, intron 19 of 20) 65639 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak2_62_40_0.33581829362875_5.52546115143246_0.641883003087205 chr18 31804152 31804584 + 0.641883003087205 NA intron (NM_028866, intron 1 of 21) CpG 311 NM_001170966 74320 Mm.277705 NM_028866 ENSMUSG00000024400 Wdr33 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146 WD repeat domain 33 protein-coding common_peak2_47_52_-0.424099787691193_5.5158705607176_0.641883003087205-3 chr5 44225981 44226575 + 0.641883003087205 NA intron (NM_173764, intron 1 of 13) CpG 328 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding unique_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-3 chr8 36831312 36831966 + 0.64171680596148 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -98585 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-2 chr4 126148255 126148775 + 0.64171680596148 NA 5' UTR (NM_172145, exon 1 of 3) 5' UTR (NM_172145, exon 1 of 3) 512 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148 chr1 135937731 135938345 + 0.64171680596148 NA Intergenic Intergenic -18831 NM_019645 18772 Mm.4494 NM_019645 ENSMUSG00000026413 Pkp1 - plakophilin 1 protein-coding common_peak2_44_27_0.40401322536898_5.00936153474209_0.64171680596148-3 chr6 28421081 28421599 + 0.64171680596148 NA 5' UTR (NM_028900, exon 1 of 2) 5' UTR (NM_028900, exon 1 of 2) 384 NM_028900 74375 Mm.332950 NM_028900 ENSMUSG00000029708 Gcc1 4932417P04Rik golgi coiled coil 1 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-7 chr6 71270934 71271379 + 0.64171680596148 NA promoter-TSS (NM_145568) promoter-TSS (NM_145568) -515 NR_106192 102465900 NR_106192 ENSMUSG00000098623 Mir8112 Gm27739|mmu-mir-8112 microRNA 8112 ncRNA common_peak2_44_27_0.40401322536898_5.00936153474209_0.64171680596148 chr1 172219882 172220516 + 0.64171680596148 NA promoter-TSS (NM_009813) promoter-TSS (NM_009813) -304 NM_009813 12372 Mm.12829 NM_009813 ENSMUSG00000007122 Casq1 CSQ|CSQ-1|CSQ1|sCSQ calsequestrin 1 protein-coding unique_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-2 chr19 46394331 46394973 + 0.64171680596148 NA intron (NM_016860, intron 1 of 10) intron (NM_016860, intron 1 of 10) 1083 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding unique_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148 chr19 8987943 8988457 + 0.64171680596148 NA Intergenic Intergenic -1084 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148 chr1 155049214 155049735 + 0.64171680596148 NA Intergenic Intergenic 33790 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-5 chr8 11635945 11636405 + 0.64171680596148 NA promoter-TSS (NM_001281975) promoter-TSS (NM_001281975) -418 NM_001281974 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-4 chr2 145321618 145322099 + 0.64171680596148 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 79247 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-11 chr8 45710172 45710634 + 0.64171680596148 NA intron (NM_001310708, intron 1 of 19) intron (NM_001310708, intron 1 of 19) 48410 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding unique_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148 chr19 10869207 10869726 + 0.64171680596148 NA intron (NM_133804, intron 1 of 10) intron (NM_133804, intron 1 of 10) 313 NM_133804 98170 Mm.490254 NM_133804 ENSMUSG00000024736 Tmem132a 6720481D13Rik|Hspa5bp1|Orai1|R74613 transmembrane protein 132A protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-5 chr5 115489976 115490236 + 0.64171680596148 NA Intergenic CpG -5622 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-9 chr7 28349930 28350473 + 0.64171680596148 NA promoter-TSS (NM_013647) promoter-TSS (NM_013647) -488 NM_013647 20055 Mm.702 NM_013647 ENSMUSG00000037563 Rps16 AA420385|AI317031 ribosomal protein S16 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-12 chr8 106517923 106518381 + 0.64171680596148 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 7300 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-4 chr2 154372064 154372635 + 0.64171680596148 NA intron (NM_025876, intron 1 of 13) intron (NM_025876, intron 1 of 13) 370 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-3 chr15 64222641 64223149 + 0.64171680596148 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 89778 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-3 chr10 71123057 71123518 + 0.64171680596148 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 36403 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-3 chr4 89463554 89464245 + 0.64171680596148 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -152867 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_32_37_-0.480861529045827_5.00749674892067_0.64171680596148 chr16 49952282 49952673 + 0.64171680596148 NA Intergenic Intergenic -3353 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA unique_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-2 chr6 84178129 84178734 + 0.64171680596148 NA intron (NM_001077694, intron 40 of 54) intron (NM_001077694, intron 40 of 54) 159045 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak2_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-2 chr13 3694255 3694902 + 0.64171680596148 NA Intergenic Intergenic 60546 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-8 chr6 92480589 92481188 + 0.64171680596148 NA 5' UTR (NM_001134460, exon 1 of 8) 5' UTR (NM_001134460, exon 1 of 8) 504 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak1_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-4 chr8 79295051 79295529 + 0.64171680596148 NA promoter-TSS (NM_133823) promoter-TSS (NM_133823) 212 NR_045823 234479 Mm.238026 NR_045822 Gm4890 A630049P17 predicted gene 4890 ncRNA common_peak2_44_27_0.40401322536898_5.00936153474209_0.64171680596148-2 chr1 178758848 178759188 + 0.64171680596148 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 229893 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-2 chr10 24393047 24393490 + 0.64171680596148 NA Intergenic Intergenic 169751 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_32_37_-0.480861529045827_5.00749674892067_0.64171680596148-3 chr7 139364556 139364836 + 0.64171680596148 NA Intergenic Intergenic -24413 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-6 chr5 139483977 139484312 + 0.64171680596148 NA intron (NM_001159908, intron 1 of 6) intron (NM_001159908, intron 1 of 6) 347 NM_133349 100494 Mm.24521 NM_133349 ENSMUSG00000053581 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A protein-coding common_peak1_44_27_0.40401322536898_5.00936153474209_0.64171680596148-10 chr7 30625490 30626059 + 0.64171680596148 NA intron (NM_025628, intron 1 of 3) intron (NM_025628, intron 1 of 3) 377 NM_025628 110323 Mm.400 NM_025628 ENSMUSG00000036751 Cox6b1 2010000G05Rik|Cox6b cytochrome c oxidase, subunit VIb polypeptide 1 protein-coding common_peak1_229_212_-0.186309378822195_7.64155493081474_0.641395825800617 chr2 51146790 51148974 + 0.641395825800617 NA intron (NM_028810, intron 2 of 4) CpG 1229 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak1_240_172_0.180695798471565_7.52497612687251_0.641153982122254 chr11 98941468 98944357 + 0.641153982122254 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 3201 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_249_229_-0.177644249184676_7.75666792635204_0.641030650678324 chr15 80061439 80062940 + 0.641030650678324 NA Intergenic Intergenic 16390 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_152_106_0.222980095816971_6.85295703430963_0.640764983031071 chr2 69722396 69723863 + 0.640764983031071 NA promoter-TSS (NM_001081086) promoter-TSS (NM_001081086) 41 NM_001081086 228005 Mm.11815 NM_001081086 ENSMUSG00000042133 Ppig AU019516|AU022200|B230312B02Rik|CYP|SRCyp peptidyl-prolyl isomerase G (cyclophilin G) protein-coding common_peak2_122_84_0.242404233690191_6.5305930529828_0.640728220187938-2 chr12 99392400 99393485 + 0.640728220187938 NA intron (NM_183186, intron 1 of 5) CpG 57132 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_123_84_0.254003623841836_6.53639274805862_0.640728220187938 chr10 98913799 98915055 + 0.640728220187938 NA promoter-TSS (NM_026482) promoter-TSS (NM_026482) -215 NM_001359506 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_122_84_0.242404233690191_6.5305930529828_0.640728220187938 chr6 37440989 37442092 + 0.640728220187938 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 608 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_123_84_0.254003623841836_6.53639274805862_0.640728220187938-2 chr15 77847906 77848533 + 0.640728220187938 NA Intergenic Intergenic -6044 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_122_84_0.242404233690191_6.5305930529828_0.640728220187938 chr1 40266660 40267797 + 0.640728220187938 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 642 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_123_84_0.254003623841836_6.53639274805862_0.640728220187938 chr3 101109510 101110813 + 0.640728220187938 NA promoter-TSS (NM_011197) promoter-TSS (NM_011197) 5 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak2_109_74_0.262958631281814_6.36029800613679_0.6405313143659-2 chr3 61362862 61363628 + 0.6405313143659 NA Intergenic Intergenic -1262 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak1_109_74_0.262958631281814_6.36029800613679_0.6405313143659 chr12 69998057 69999507 + 0.6405313143659 NA Intergenic Intergenic -11780 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak1_89_90_-0.303481472345357_6.35605390402602_0.6405313143659 chr15 79322804 79323903 + 0.6405313143659 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 5018 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak2_109_74_0.262958631281814_6.36029800613679_0.6405313143659 chr14 54574718 54575729 + 0.6405313143659 NA intron (NM_010590, intron 1 of 7) intron (NM_010590, intron 1 of 7) 2438 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_89_90_-0.303481472345357_6.35605390402602_0.6405313143659-2 chr6 57824121 57825230 + 0.6405313143659 NA intron (NM_146168, intron 1 of 4) CpG 450 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak1_175_166_-0.218638849023479_7.27438486796231_0.640345039238665 chr5 91961761 91963751 + 0.640345039238665 NA promoter-TSS (NR_073442) promoter-TSS (NR_073442) -126 NR_028429 381650 Mm.159453 NR_028429 ENSMUSG00000102644 Thap6 4930534K21Rik|AI448650 THAP domain containing 6 pseudo common_peak1_115_113_-0.26503197236072_6.70037402798438_0.639702037584613 chr10 119239235 119240058 + 0.639702037584613 NA exon (NM_027994, exon 1 of 15) exon (NM_027994, exon 1 of 15) 409 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak2_84_56_0.289542762352345_5.97766139534091_0.639513077857887 chr13 40729699 40730765 + 0.639513077857887 NA 5' UTR (NM_001122948, exon 1 of 7) 5' UTR (NM_001122948, exon 1 of 7) 225 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak1_84_56_0.289542762352345_5.97766139534091_0.639513077857887 chr15 6873901 6874998 + 0.639513077857887 NA promoter-TSS (NM_011019) promoter-TSS (NM_011019) -136 NM_001310469 18414 Mm.10760 NM_011019 ENSMUSG00000022146 Osmr OSMRB oncostatin M receptor protein-coding common_peak2_85_56_0.306297536471448_5.98603878240047_0.639513077857887 chr1 184707958 184708526 + 0.639513077857887 NA Intergenic Intergenic -4255 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA common_peak2_67_70_-0.346971241741475_5.97626149863394_0.639513077857887 chr13 24375651 24376434 + 0.639513077857887 NA intron (NM_001284519, intron 2 of 17) intron (NM_001284519, intron 2 of 17) -39080 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_84_56_0.289542762352345_5.97766139534091_0.639513077857887-2 chr16 50528703 50529547 + 0.639513077857887 NA intron (NR_040379, intron 1 of 5) CpG 623 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA common_peak2_84_56_0.289542762352345_5.97766139534091_0.639513077857887-2 chr13 103977742 103978971 + 0.639513077857887 NA Intergenic Intergenic -57770 NM_001005868 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak1_85_56_0.306297536471448_5.98603878240047_0.639513077857887 chr2 174110408 174111427 + 0.639513077857887 NA intron (NM_213733, intron 1 of 11) intron (NM_213733, intron 1 of 11) 566 NM_213733 228961 Mm.295629 NM_213733 ENSMUSG00000039263 Npepl1 BC023239|C85514|mKIAA1974 aminopeptidase-like 1 protein-coding common_peak1_97_65_0.281909044434357_6.18534864157563_0.638586184011 chr13 96542730 96543815 + 0.638586184011 NA promoter-TSS (NM_012048) promoter-TSS (NM_012048) 537 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak2_78_80_-0.322282336609348_6.17870883457995_0.638586184011 chr3 104637883 104639139 + 0.638586184011 NA promoter-TSS (NM_009196) promoter-TSS (NM_009196) -153 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak2_78_80_-0.322282336609348_6.17870883457995_0.638586184011-2 chr6 125480052 125481096 + 0.638586184011 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 14186 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_97_65_0.281909044434357_6.18534864157563_0.638586184011-2 chr3 144569367 144570169 + 0.638586184011 NA promoter-TSS (NM_053102) promoter-TSS (NM_053102) 448 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak2_57_61_-0.379283289009608_5.76455466588207_0.638510577194958-2 chr6 135252605 135253597 + 0.638510577194958 NA intron (NM_001080553, intron 1 of 5) intron (NM_001080553, intron 1 of 5) 1235 NM_010352 14840 Mm.272306 NM_010352 ENSMUSG00000030206 Gsg1 - germ cell associated 1 protein-coding common_peak1_57_61_-0.379283289009608_5.76455466588207_0.638510577194958-3 chr17 12326971 12327784 + 0.638510577194958 NA TTS (NR_045290) TTS (NR_045290) 8524 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA common_peak1_58_61_-0.354795225064195_5.77679869785478_0.638510577194958 chr5 124424789 124425532 + 0.638510577194958 NA intron (NM_001081203, intron 1 of 31) CpG 442 NM_001359979 243272 Mm.23879 NM_145631 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch 1 protein-coding common_peak2_57_61_-0.379283289009608_5.76455466588207_0.638510577194958 chr6 99521316 99521927 + 0.638510577194958 NA promoter-TSS (NM_001347345) promoter-TSS (NM_001347345) -628 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_57_61_-0.379283289009608_5.76455466588207_0.638510577194958 chr11 78536487 78537122 + 0.638510577194958 NA promoter-TSS (NM_001159392) promoter-TSS (NM_001159392) 443 NM_018854 55978 Mm.358671 NM_018854 ENSMUSG00000001105 Ift20 0610009H04Rik|AU015496|mIFT20 intraflagellar transport 20 protein-coding common_peak1_57_61_-0.379283289009608_5.76455466588207_0.638510577194958-2 chr16 8667509 8668147 + 0.638510577194958 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 4325 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_57_61_-0.379283289009608_5.76455466588207_0.638510577194958-3 chr9 102715047 102716213 + 0.638510577194958 NA Intergenic Intergenic -2174 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_73_48_0.30919591736899_5.7693078027997_0.638510577194945 chr2 27858405 27859170 + 0.638510577194945 NA Intergenic Intergenic -27638 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_73_48_0.30919591736899_5.7693078027997_0.638510577194945 chr11 61174356 61174989 + 0.638510577194945 NA intron (NM_001004143, intron 1 of 12) CpG 387 NM_001004143 216825 Mm.30602 NM_001004143 ENSMUSG00000042506 Usp22 AI427806 ubiquitin specific peptidase 22 protein-coding common_peak2_177_167_-0.211065175952077_7.28678483480272_0.638166314789719 chr2 152669466 152671620 + 0.638166314789719 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 1082 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_338_305_-0.153284518378189_8.18074558350356_0.638133018361286 chr11 8466108 8469833 + 0.638133018361286 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 196565 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_169_119_0.208487201335323_7.01113419627618_0.638030379488151 chr11 113060239 113061771 + 0.638030379488151 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 140833 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_251_231_-0.178720656027226_7.76862066711396_0.637907655571166 chr15 80061369 80062902 + 0.637907655571166 NA Intergenic Intergenic 16444 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_153_107_0.218891970434477_6.86433348738071_0.637842283439611-2 chr8 105325448 105326971 + 0.637842283439611 NA promoter-TSS (NM_177449) promoter-TSS (NM_177449) 67 NM_177449 234684 Mm.381717 NM_177449 ENSMUSG00000041679 Lrrc29 A630024J02Rik|FBL9|FBXL9 leucine rich repeat containing 29 protein-coding common_peak1_153_107_0.218891970434477_6.86433348738071_0.637842283439611 chr2 158144470 158146334 + 0.637842283439611 NA intron (NM_009373, intron 1 of 12) intron (NM_009373, intron 1 of 12) 990 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_153_107_0.218891970434477_6.86433348738071_0.637842283439611-3 chr9 49922623 49923919 + 0.637842283439611 NA Intergenic Intergenic -123878 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_328_239_0.154319798121176_7.98405049466911_0.637651391646713 chr7 49246340 49248508 + 0.637651391646713 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 1235 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_272_249_-0.171861417551877_7.87985357588615_0.63730845056906 chr15 96286167 96288190 + 0.63730845056906 NA promoter-TSS (NM_175251) promoter-TSS (NM_175251) -344 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak2_103_102_-0.275072311874594_6.54896437124592_0.637084967933602-2 chr4 137593713 137594702 + 0.637084967933602 NA promoter-TSS (NM_001347227) promoter-TSS (NM_001347227) 35 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_103_102_-0.275072311874594_6.54896437124592_0.637084967933602 chr17 20945481 20946350 + 0.637084967933602 NA intron (NM_016891, intron 1 of 14) CpG 461 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding common_peak1_124_85_0.248636026630845_6.55058276801752_0.637084967933578 chr19 47885350 47886643 + 0.637084967933578 NA intron (NM_030051, intron 8 of 8) intron (NM_030051, intron 8 of 8) 20202 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_117_114_-0.25314394519494_6.7189180783469_0.636468615133448 chr14 7867481 7868657 + 0.636468615133448 NA intron (NM_001081427, intron 2 of 45) intron (NM_001081427, intron 2 of 45) 50112 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_139_96_0.237333191212188_6.71857943779322_0.636468615133448 chr4 133632362 133633778 + 0.636468615133448 NA intron (NM_001017968, intron 1 of 7) CpG 359 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak2_91_91_-0.287763633834002_6.37968013914001_0.636428116832682 chr19 40239777 40240647 + 0.636428116832682 NA intron (NM_016861, intron 4 of 6) intron (NM_016861, intron 4 of 6) 31404 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak1_91_91_-0.287763633834002_6.37968013914001_0.636428116832682 chr2 180041767 180042412 + 0.636428116832682 NA promoter-TSS (NM_178750) promoter-TSS (NM_178750) 375 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding common_peak1_195_183_-0.204313771837447_7.42140507013829_0.636181979355798 chr3 37934193 37936336 + 0.636181979355798 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 36451 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_171_120_0.213269333788349_7.02549790416877_0.63543291655467 chr11 3912543 3914190 + 0.63543291655467 NA 5' UTR (NM_153142, exon 1 of 2) 5' UTR (NM_153142, exon 1 of 2) 1298 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak1_146_140_-0.232412586378529_7.02334505920953_0.63543291655467 chr11 69671049 69672251 + 0.63543291655467 NA intron (NM_001159375, intron 1 of 10) CpG 773 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak2_146_140_-0.232412586378529_7.02334505920953_0.63543291655467 chr11 62456764 62458367 + 0.63543291655467 NA promoter-TSS (NM_177229) promoter-TSS (NM_177229) -233 NM_177229 20185 Mm.271814 NM_011308 ENSMUSG00000018501 Ncor1 5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047 nuclear receptor co-repressor 1 protein-coding common_peak1_555_488_-0.120823562715636_8.87327887359442_0.635407865143727 chr8 84975907 84978579 + 0.635407865143727 NA 3' UTR (NM_008416, exon 1 of 1) 3' UTR (NM_008416, exon 1 of 1) 1505 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_131_127_-0.24704397474873_6.87647801262563_0.63496949683866-2 chr7 46919223 46920571 + 0.63496949683866 NA promoter-TSS (NM_001348089) promoter-TSS (NM_001348089) 72 NM_001348089 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak2_131_127_-0.24704397474873_6.87647801262563_0.63496949683866 chr15 10663001 10664398 + 0.63496949683866 NA intron (NM_001356534, intron 2 of 16) B1_Mus1|SINE|Alu 49841 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_154_108_0.21486713395649_6.87561789175517_0.634969496838635 chr15 76710636 76711639 + 0.634969496838635 NA promoter-TSS (NM_058214) promoter-TSS (NM_058214) 496 NM_001358893 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding common_peak2_54_34_0.369549284405973_5.31405765914795_0.634705740500755 chr11 49245649 49246197 + 0.634705740500755 NA intron (NM_010794, intron 2 of 2) intron (NM_010794, intron 2 of 2) -1554 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_54_34_0.369549284405973_5.31405765914795_0.634705740500755-3 chr16 45836441 45837134 + 0.634705740500755 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 7591 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_54_34_0.369549284405973_5.31405765914795_0.634705740500755-3 chr3 130709125 130709457 + 0.634705740500755 NA exon (NM_025509, exon 1 of 4) exon (NM_025509, exon 1 of 4) 153 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak2_54_34_0.369549284405973_5.31405765914795_0.634705740500755-2 chr11 72848705 72849198 + 0.634705740500755 NA intron (NM_001045536, intron 12 of 54) intron (NM_001045536, intron 12 of 54) 52725 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak1_54_34_0.369549284405973_5.31405765914795_0.634705740500755 chr10 62485874 62486700 + 0.634705740500755 NA intron (NM_001358543, intron 1 of 7) intron (NM_001358543, intron 1 of 7) 311 NM_001113355 30930 Mm.260703 NM_133672 ENSMUSG00000020078 Vps26a AA407240|HB58|Vps26 VPS26 retromer complex component A protein-coding common_peak1_54_34_0.369549284405973_5.31405765914795_0.634705740500755-5 chrX 74424784 74425315 + 0.634705740500755 NA intron (NM_001161421, intron 1 of 10) intron (NM_001161421, intron 1 of 10) 437 NM_001136067 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding common_peak1_54_34_0.369549284405973_5.31405765914795_0.634705740500755-4 chr9 71771001 71771583 + 0.634705740500755 NA 5' UTR (NM_001304362, exon 1 of 19) 5' UTR (NM_001304362, exon 1 of 19) 310 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_54_34_0.369549284405973_5.31405765914795_0.634705740500755-4 chr5 91988327 91989048 + 0.634705740500755 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 1214 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding common_peak1_54_34_0.369549284405973_5.31405765914795_0.634705740500755-2 chr2 137408516 137409276 + 0.634705740500755 NA Intergenic Intergenic -292376 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_40_45_-0.445547408883331_5.30078825161535_0.634705740500749-5 chr3 97942037 97942949 + 0.634705740500749 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 12320 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak2_40_45_-0.445547408883331_5.30078825161535_0.634705740500749-2 chr12 16870614 16871221 + 0.634705740500749 NA Intergenic Intergenic -24061 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak2_40_45_-0.445547408883331_5.30078825161535_0.634705740500749-4 chr2 181187399 181188121 + 0.634705740500749 NA non-coding (NR_151465, exon 2 of 4) non-coding (NR_151465, exon 2 of 4) 513 NM_001356427 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak1_40_45_-0.445547408883331_5.30078825161535_0.634705740500749 chr15 11085386 11085776 + 0.634705740500749 NA intron (NM_175501, intron 2 of 23) intron (NM_175501, intron 2 of 23) 20808 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding common_peak1_40_45_-0.445547408883331_5.30078825161535_0.634705740500749-3 chr7 113147112 113147780 + 0.634705740500749 NA Intergenic Intergenic -5431 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_40_45_-0.445547408883331_5.30078825161535_0.634705740500749-3 chr2 156420539 156421546 + 0.634705740500749 NA 5' UTR (NM_013510, exon 1 of 22) 5' UTR (NM_013510, exon 1 of 22) 133 NM_001291123 13821 Mm.20852 NM_013510 ENSMUSG00000027624 Epb41l1 4.1N|Epb4.1l1|NBL1|mKIAA0338 erythrocyte membrane protein band 4.1 like 1 protein-coding common_peak1_40_45_-0.445547408883331_5.30078825161535_0.634705740500749-2 chr3 98107225 98107890 + 0.634705740500749 NA intron (NM_010928, intron 12 of 33) intron (NM_010928, intron 12 of 33) -53077 NM_027665 71078 Mm.50711 NM_027665 ENSMUSG00000043468 Adam30 4933424D07Rik|svph4 a disintegrin and metallopeptidase domain 30 protein-coding common_peak2_40_45_-0.445547408883331_5.30078825161535_0.634705740500749 chr11 97435406 97435908 + 0.634705740500749 NA Intergenic Intergenic -14503 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_64_41_0.345822670856987_5.56522875820725_0.634590564057518-2 chr16 43361497 43362474 + 0.634590564057518 NA intron (NM_181058, intron 2 of 6) intron (NM_181058, intron 2 of 6) 58211 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak2_49_53_-0.39258864001116_5.55859318215789_0.634590564057518 chr16 45078627 45079283 + 0.634590564057518 NA Intergenic Intergenic -15056 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_64_41_0.345822670856987_5.56522875820725_0.634590564057518 chr10 68237286 68238187 + 0.634590564057518 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 40990 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-2 chr17 35978822 35979430 + 0.634590564057518 NA promoter-TSS (NM_008136) promoter-TSS (NM_008136) -103 NM_001282012 75210 Mm.40036 NM_145487 ENSMUSG00000038500 Prr3 4930540G07Rik|Cat56 proline-rich polypeptide 3 protein-coding common_peak1_63_41_0.323612662292547_5.55412375392503_0.634590564057518 chr11 117991592 117992522 + 0.634590564057518 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 5200 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-3 chr19 5345232 5345798 + 0.634590564057518 NA 3' UTR (NM_028623, exon 3 of 3) 3' UTR (NM_028623, exon 3 of 3) 4059 NM_028623 73720 Mm.36816 NM_028623 ENSMUSG00000024846 Cst6 1110017E11Rik|N28197|ichq cystatin E/M protein-coding common_peak2_64_41_0.345822670856987_5.56522875820725_0.634590564057518 chr10 34418015 34418482 + 0.634590564057518 NA intron (NM_176968, intron 1 of 11) CpG 303 NM_176968 319638 Mm.73467 NM_176968 ENSMUSG00000039480 Nt5dc1 6030401B09Rik|AW987726|Nt5c2l1 5'-nucleotidase domain containing 1 protein-coding common_peak2_63_41_0.323612662292547_5.55412375392503_0.634590564057518-3 chr3 36066158 36066734 + 0.634590564057518 NA intron (NM_172678, intron 1 of 17) ID_B1|SINE|B4 467 NM_172678 229211 Mm.260997 NM_172678 ENSMUSG00000027710 Acad9 2600017P15Rik|4732402K02|C630012L17Rik|NPD002 acyl-Coenzyme A dehydrogenase family, member 9 protein-coding common_peak2_63_41_0.323612662292547_5.55412375392503_0.634590564057518 chr11 99573595 99574219 + 0.634590564057518 NA Intergenic Intergenic 7109 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding common_peak2_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-5 chr8 61340636 61341061 + 0.634590564057518 NA intron (NM_021506, intron 4 of 11) intron (NM_021506, intron 4 of 11) -51976 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_63_41_0.323612662292547_5.55412375392503_0.634590564057518-3 chr4 129819011 129819982 + 0.634590564057518 NA promoter-TSS (NM_008974) promoter-TSS (NM_008974) -983 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak1_49_53_-0.39258864001116_5.55859318215789_0.634590564057518 chr13 108245472 108246501 + 0.634590564057518 NA intron (NM_029001, intron 1 of 7) L1M5|LINE|L1 31582 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak1_63_41_0.323612662292547_5.55412375392503_0.634590564057518-2 chr17 27057479 27058392 + 0.634590564057518 NA intron (NM_080553, intron 1 of 57) intron (NM_080553, intron 1 of 57) 631 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding common_peak1_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-3 chr5 3647378 3648005 + 0.634590564057518 NA 5' UTR (NM_026033, exon 1 of 5) 5' UTR (NM_026033, exon 1 of 5) 245 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|Odag GATA zinc finger domain containing 1 protein-coding common_peak2_64_41_0.345822670856987_5.56522875820725_0.634590564057518-2 chr3 19425455 19426138 + 0.634590564057518 NA Intergenic Intergenic -82799 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding unique_peak1_63_41_0.323612662292547_5.55412375392503_0.634590564057518 chr9 108936688 108937402 + 0.634590564057518 NA exon (NM_025407, exon 2 of 13) exon (NM_025407, exon 2 of 13) 397 NM_025407 22273 Mm.335460 NM_025407 ENSMUSG00000025651 Uqcrc1 1110032G10Rik ubiquinol-cytochrome c reductase core protein 1 protein-coding common_peak2_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-4 chr4 133276881 133277593 + 0.634590564057518 NA intron (NM_025667, intron 1 of 5) intron (NM_025667, intron 1 of 5) 553 NM_025667 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding common_peak1_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-4 chr6 30509175 30509674 + 0.634590564057518 NA promoter-TSS (NM_027073) promoter-TSS (NM_027073) 349 NM_001347087 72649 Mm.45418 NM_178625 ENSMUSG00000029782 Tmem209 2700094F01Rik|AI428435 transmembrane protein 209 protein-coding common_peak2_63_41_0.323612662292547_5.55412375392503_0.634590564057518-2 chr2 33205299 33206074 + 0.634590564057518 NA intron (NM_001290570, intron 7 of 16) MIRb|SINE|MIR -10275 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak1_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-5 chr9 109073846 109074485 + 0.634590564057518 NA promoter-TSS (NM_172774) promoter-TSS (NM_172774) -41 NM_172774 235610 Mm.100622 NM_172774 ENSMUSG00000025646 Atrip 6620401K05Rik ATR interacting protein protein-coding common_peak1_63_41_0.323612662292547_5.55412375392503_0.634590564057518-4 chr8 4613206 4614060 + 0.634590564057518 NA intron (NM_145591, intron 1 of 3) intron (NM_145591, intron 1 of 3) 463 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak1_49_53_-0.39258864001116_5.55859318215789_0.634590564057518-2 chr13 112770792 112771298 + 0.634590564057518 NA Intergenic Intergenic -29732 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak2_36_22_0.407398785000429_4.72726134855723_0.634510163964152-3 chr16 35768909 35769362 + 0.634510163964152 NA exon (NM_153550, exon 1 of 9) exon (NM_153550, exon 1 of 9) 221 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding common_peak2_37_22_0.445601498488134_4.74636270530108_0.634510163964152-4 chr4 155171543 155172045 + 0.634510163964152 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 50741 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak2_36_22_0.407398785000429_4.72726134855723_0.634510163964152 chr7 28393027 28393516 + 0.634510163964152 NA promoter-TSS (NM_026042) promoter-TSS (NM_026042) 275 NM_019458 54624 Mm.7916 NM_019458 ENSMUSG00000003437 Paf1 5730511K23Rik|AA675045 Paf1, RNA polymerase II complex component protein-coding common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152 chr11 3331088 3331575 + 0.634510163964152 NA intron (NM_178149, intron 1 of 5) intron (NM_178149, intron 1 of 5) 600 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-2 chr10 76531688 76532145 + 0.634510163964152 NA exon (NM_146006, exon 2 of 22) exon (NM_146006, exon 2 of 22) 311 NM_146006 16987 Mm.55075 NM_146006 ENSMUSG00000033105 Lss 2810025N20Rik|D10Ertd116e|Osc lanosterol synthase protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152 chr10 69916426 69916827 + 0.634510163964152 NA intron (NM_170689, intron 23 of 41) intron (NM_170689, intron 23 of 41) -8906 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-2 chr11 62022638 62023143 + 0.634510163964152 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) -54134 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-5 chr3 99141095 99141386 + 0.634510163964152 NA intron (NM_027462, intron 1 of 5) CpG 150 NM_027462 70560 Mm.316754 NM_027462 ENSMUSG00000004233 Wars2 5730427B17Rik|9430020O07Rik|AI413375|TrpRS tryptophanyl tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-7 chr17 26602740 26603328 + 0.634510163964152 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 41522 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-10 chr4 119123005 119123819 + 0.634510163964152 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 14667 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-12 chrX 12773723 12774035 + 0.634510163964152 NA intron (NR_045852, intron 2 of 4) intron (NR_045852, intron 2 of 4) 11601 NR_045852 552913 Mm.216846 NR_045852 ENSMUSG00000085891 Gm14634 - predicted gene 14634 ncRNA common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-8 chr5 91242273 91242549 + 0.634510163964152 NA Intergenic Intergenic 40665 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-9 chr5 36722991 36723488 + 0.634510163964152 NA Intergenic Intergenic 25440 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-13 chr8 44758038 44758666 + 0.634510163964152 NA Intergenic Intergenic -191856 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152 chr12 84862030 84862817 + 0.634510163964152 NA intron (NM_013589, intron 2 of 34) intron (NM_013589, intron 2 of 34) -13379 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-8 chr4 107890319 107890897 + 0.634510163964152 NA intron (NM_028754, intron 1 of 6) intron (NM_028754, intron 1 of 6) 709 NM_028754 74098 Mm.274853 NM_028754 ENSMUSG00000028608 0610037L13Rik 1110008H16Rik RIKEN cDNA 0610037L13 gene protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-11 chr5 21497928 21498472 + 0.634510163964152 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -45327 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-2 chr16 84702828 84703238 + 0.634510163964152 NA Intergenic CpG -9990 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA unique_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-3 chr4 137136266 137136903 + 0.634510163964152 NA Intergenic Intergenic 28482 NR_040443 100503595 Mm.421314 NR_040443 ENSMUSG00000085833 Gm13003 - predicted gene 13003 ncRNA common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-9 chr4 63545809 63546240 + 0.634510163964152 NA intron (NM_024173, intron 1 of 2) intron (NM_024173, intron 1 of 2) 1259 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-4 chr19 16921567 16921956 + 0.634510163964152 NA Intergenic Intergenic -34357 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_37_22_0.445601498488134_4.74636270530108_0.634510163964152-3 chr13 98954781 98955221 + 0.634510163964152 NA Intergenic Intergenic -28617 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-3 chr2 117746019 117746472 + 0.634510163964152 NA Intergenic Intergenic 66557 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-3 chr13 53033922 53034561 + 0.634510163964152 NA Intergenic Intergenic -53202 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-3 chr19 5870661 5871508 + 0.634510163964152 NA intron (NM_026169, intron 3 of 10) intron (NM_026169, intron 3 of 10) 4124 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-5 chr15 76539109 76539647 + 0.634510163964152 NA promoter-TSS (NM_013909) promoter-TSS (NM_013909) 435 NM_029643 52710 Mm.28597 NM_029643 ENSMUSG00000022560 Slc52a2 2010003P03Rik|D15Ertd747e|GPCR42|Gpr172b|PAR2|mRFT1 solute carrier protein 52, member 2 protein-coding unique_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-4 chr9 107556568 107557331 + 0.634510163964152 NA intron (NM_019713, intron 1 of 4) intron (NM_019713, intron 1 of 4) 2366 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-7 chr3 56962166 56962588 + 0.634510163964152 NA Intergenic Intergenic 339611 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-10 chr7 44496676 44497062 + 0.634510163964152 NA promoter-TSS (NM_197991) promoter-TSS (NM_197991) 281 NM_028169 75538 Mm.258841 NM_028169 ENSMUSG00000051113 Fam71e1 0610007G24Rik|1700021N13Rik|1700021P22Rik|GARI-L5 family with sequence similarity 71, member E1 protein-coding common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-9 chr5 110980793 110981511 + 0.634510163964152 NA intron (NM_001267622, intron 2 of 22) intron (NM_001267622, intron 2 of 22) -22992 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-2 chr16 43699231 43699582 + 0.634510163964152 NA Intergenic Intergenic -35222 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-2 chr13 34726492 34726807 + 0.634510163964152 NA Intergenic Intergenic -12993 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_36_22_0.407398785000429_4.72726134855723_0.634510163964152 chr1 155812266 155812771 + 0.634510163964152 NA intron (NM_001024945, intron 1 of 11) CpG 381 NM_023268 104009 Mm.27035 NM_023268 ENSMUSG00000033684 Qsox1 1300003H02Rik|QSOX|Qscn6|SOx|b2b2673Clo quiescin Q6 sulfhydryl oxidase 1 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-6 chr2 119112398 119112820 + 0.634510163964152 NA promoter-TSS (NM_011234) promoter-TSS (NM_011234) -208 NM_011234 19361 Mm.330492 NM_011234 ENSMUSG00000027323 Rad51 AV304093|Rad51a|Reca RAD51 recombinase protein-coding common_peak1_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-4 chr9 15357191 15357741 + 0.634510163964152 NA intron (NM_176976, intron 1 of 26) intron (NM_176976, intron 1 of 26) 322 NM_176976 319675 Mm.218317 NM_176976 ENSMUSG00000046111 Cep295 5830418K08Rik|5832426L23Rik|Gm1131|Kiaa1731 centrosomal protein 295 protein-coding unique_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-2 chr4 116807136 116807574 + 0.634510163964152 NA promoter-TSS (NM_133250) promoter-TSS (NM_133250) 204 NM_026654 68276 Mm.30534 NM_026654 ENSMUSG00000028688 Toe1 4930584N22Rik|4933424D16Rik|AI413517 target of EGR1, member 1 (nuclear) protein-coding common_peak2_36_22_0.407398785000429_4.72726134855723_0.634510163964152-2 chr11 44519563 44520078 + 0.634510163964152 NA intron (NM_001166553, intron 1 of 5) intron (NM_001166553, intron 1 of 5) 443 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-5 chr19 44749127 44749422 + 0.634510163964152 NA Intergenic Intergenic -8120 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152 chr10 111570489 111570954 + 0.634510163964152 NA Intergenic Intergenic 23552 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-10 chr6 70811761 70812329 + 0.634510163964152 NA Intergenic Intergenic -19870 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak1_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-3 chr6 120914590 120914960 + 0.634510163964152 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 2049 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-6 chr16 43574212 43574644 + 0.634510163964152 NA intron (NM_001285805, intron 7 of 10) intron (NM_001285805, intron 7 of 10) -66227 NR_030576 100124467 NR_030576 ENSMUSG00000076372 Mir568 Mirn568|mmu-mir-568 microRNA 568 ncRNA common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-4 chr2 125301610 125301983 + 0.634510163964152 NA exon (NM_007993, exon 66 of 66) exon (NM_007993, exon 66 of 66) 54281 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-4 chr13 113615189 113615615 + 0.634510163964152 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 3162 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding unique_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-3 chr8 123859759 123860317 + 0.634510163964152 NA 5' UTR (NM_028536, exon 1 of 4) 5' UTR (NM_028536, exon 1 of 4) 171 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding common_peak2_37_22_0.445601498488134_4.74636270530108_0.634510163964152 chr11 96256488 96256922 + 0.634510163964152 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) 5045 NR_037977 193022 Mm.169508 NR_037977 Gm53 - predicted gene 53 ncRNA common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-7 chr4 133070256 133070776 + 0.634510163964152 NA intron (NM_146155, intron 6 of 6) intron (NM_146155, intron 6 of 6) 59010 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-12 chr8 32200245 32200541 + 0.634510163964152 NA Intergenic Intergenic 48498 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA unique_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152 chr11 4272572 4273267 + 0.634510163964152 NA TTS (NM_008501) TTS (NM_008501) 6123 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_26_31_-0.520398169526597_4.7398009152367_0.634510163964152 chr13 97579977 97580439 + 0.634510163964152 NA intron (NR_046157, intron 2 of 2) intron (NR_046157, intron 2 of 2) 20208 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak2_36_22_0.407398785000429_4.72726134855723_0.634510163964152-4 chr6 17637263 17637811 + 0.634510163964152 NA intron (NM_007604, intron 1 of 9) intron (NM_007604, intron 1 of 9) 527 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding common_peak2_26_31_-0.520398169526597_4.7398009152367_0.634510163964152-11 chr7 45897310 45897573 + 0.634510163964152 NA promoter-TSS (NM_001291064) promoter-TSS (NM_001291064) 372 NM_144801 70209 Mm.163766 NM_144801 ENSMUSG00000002781 Tmem143 2310076O21Rik|AI481604 transmembrane protein 143 protein-coding unique_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-4 chr8 41014569 41015283 + 0.634510163964152 NA intron (NM_001005863, intron 7 of 13) intron (NM_001005863, intron 7 of 13) -2542 NR_015457 78849 Mm.440930 NR_015457 ENSMUSG00000084960 B430010I23Rik - RIKEN cDNA B430010I23 gene ncRNA common_peak2_37_22_0.445601498488134_4.74636270530108_0.634510163964152-2 chr11 113031379 113032010 + 0.634510163964152 NA Intergenic Intergenic 170144 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_36_22_0.407398785000429_4.72726134855723_0.634510163964152-6 chr3 144578467 144578919 + 0.634510163964152 NA intron (NM_053102, intron 2 of 4) intron (NM_053102, intron 2 of 4) 8266 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_37_22_0.445601498488134_4.74636270530108_0.634510163964152-8 chr19 53403585 53403864 + 0.634510163964152 NA Intergenic Intergenic -13090 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_225_161_0.183417719202382_7.43155886248582_0.6342361743404 chr7 139266355 139268567 + 0.6342361743404 NA TTS (NM_001033206) TTS (NM_001033206) 18979 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_68_71_-0.346236097418603_5.99680695273301_0.634202858112816 chr19 46503817 46504399 + 0.634202858112816 NA intron (NM_053100, intron 1 of 5) intron (NM_053100, intron 1 of 5) 2460 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_69_71_-0.325623988469753_6.00711300720744_0.634202858112816 chr4 89050880 89052216 + 0.634202858112816 NA intron (NR_033533, intron 1 of 2) intron (NR_033533, intron 1 of 2) 1241 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak1_69_71_-0.325623988469753_6.00711300720744_0.634202858112816-2 chr8 84832014 84832767 + 0.634202858112816 NA promoter-TSS (NR_033145) promoter-TSS (NR_033145) 108 NM_183358 102060 Mm.489649 NM_183358 ENSMUSG00000033751 Gadd45gip1 2310040G17Rik|AI425883|Crif1|MRP-L59|Plinp1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 protein-coding common_peak2_68_71_-0.346236097418603_5.99680695273301_0.634202858112816 chr10 94147940 94148616 + 0.634202858112816 NA intron (NM_011629, intron 1 of 13) CpG 347 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding common_peak2_69_71_-0.325623988469753_6.00711300720744_0.634202858112816 chr11 88172190 88172921 + 0.634202858112816 NA intron (NM_001172099, intron 1 of 9) intron (NM_001172099, intron 1 of 9) 2990 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_69_71_-0.325623988469753_6.00711300720744_0.634202858112816-3 chr9 102759177 102759943 + 0.634202858112816 NA Intergenic Intergenic 19912 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_68_71_-0.346236097418603_5.99680695273301_0.634202858112816-3 chr9 63697768 63698499 + 0.634202858112816 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 59861 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_68_71_-0.346236097418603_5.99680695273301_0.634202858112816-2 chr2 30470027 30470690 + 0.634202858112816 NA Intergenic CpG 3841 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_68_71_-0.346236097418603_5.99680695273301_0.634202858112816-2 chr10 96620677 96621596 + 0.634202858112816 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 4135 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_86_57_0.297767628477149_6.00686480936615_0.634202858112803 chr15 78926201 78927178 + 0.634202858112803 NA promoter-TSS (NM_008495) promoter-TSS (NM_008495) -36 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak2_98_66_0.274757416594197_6.20346789875487_0.633977425221322 chr1 180726082 180726573 + 0.633977425221322 NA exon (NM_133225, exon 1 of 8) exon (NM_133225, exon 1 of 8) 284 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak2_79_81_-0.321965020792898_6.19656949422163_0.633977425221322 chr11 80383395 80383929 + 0.633977425221322 NA intron (NR_045038, intron 1 of 16) intron (NR_045038, intron 1 of 16) 383 NM_001130171 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding common_peak1_98_66_0.274757416594197_6.20346789875487_0.633977425221322 chr1 133212359 133213955 + 0.633977425221322 NA Intergenic Intergenic -32940 NM_001160268 240753 Mm.253559 NM_182930 ENSMUSG00000041757 Plekha6 9530028L01Rik|AU042621|Pepp3 pleckstrin homology domain containing, family A member 6 protein-coding common_peak1_79_81_-0.321965020792898_6.19656949422163_0.633977425221322-2 chr8 84249113 84250138 + 0.633977425221322 NA TTS (NM_026423) TTS (NM_026423) 136 NM_001007571 101966 Mm.200723 NM_001007571 ENSMUSG00000019362 D8Ertd738e AA589584 DNA segment, Chr 8, ERATO Doi 738, expressed protein-coding common_peak1_79_81_-0.321965020792898_6.19656949422163_0.633977425221322 chr1 37998174 37998971 + 0.633977425221322 NA intron (NM_198303, intron 1 of 23) CpG 562 NM_198303 226982 Mm.260943 NM_198303 ENSMUSG00000026083 Eif5b A030003E17Rik|BC018347|IF2 eukaryotic translation initiation factor 5B protein-coding common_peak2_98_66_0.274757416594197_6.20346789875487_0.633977425221322-2 chr11 79738454 79739277 + 0.633977425221322 NA Intergenic Intergenic 12465 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak2_80_81_-0.30416955149047_6.20546722887285_0.633977425221322 chr11 115954982 115956188 + 0.633977425221322 NA intron (NM_020483, intron 4 of 10) intron (NM_020483, intron 4 of 10) -19140 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-9 chr17 45744576 45745019 + 0.633951497070961 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 10291 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-3 chr11 43929181 43929683 + 0.633951497070961 NA Intergenic Intergenic -28195 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-4 chr2 48497644 48498214 + 0.633951497070961 NA Intergenic Intergenic -316180 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-6 chr14 30624846 30625348 + 0.633951497070961 NA intron (NM_011103, intron 1 of 17) intron (NM_011103, intron 1 of 17) 1111 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-7 chr5 66165251 66165642 + 0.633951497070961 NA Intergenic Intergenic -13492 NM_001127382 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak1_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-3 chr16 14163411 14163676 + 0.633951497070961 NA intron (NM_001114085, intron 1 of 8) CpG 268 NM_001114085 67203 Mm.24105 NM_023317 ENSMUSG00000022678 Nde1 2810027M15Rik|AU042936|AW822251|Nude|mNudE nudE neurodevelopment protein 1 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-7 chr15 71869302 71869738 + 0.633951497070961 NA intron (NM_027174, intron 42 of 63) intron (NM_027174, intron 42 of 63) -141682 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961 chr15 66715824 66716229 + 0.633951497070961 NA intron (NM_009375, intron 23 of 47) intron (NM_009375, intron 23 of 47) 45256 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-11 chr19 6136737 6137041 + 0.633951497070961 NA intron (NM_019722, intron 3 of 4) PB1D10|SINE|Alu 4248 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-3 chr15 5241779 5242179 + 0.633951497070961 NA intron (NM_001136079, intron 2 of 2) intron (NM_001136079, intron 2 of 2) 2208 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak1_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-4 chr17 36836596 36836912 + 0.633951497070961 NA promoter-TSS (NM_001286727) promoter-TSS (NM_001286727) -392 NM_001025599 22670 Mm.34587 NM_030698 ENSMUSG00000024457 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif-containing 26 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-6 chr15 62204707 62204949 + 0.633951497070961 NA intron (NR_132746, intron 3 of 6) intron (NR_132746, intron 3 of 6) 14623 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-13 chr5 123992122 123992621 + 0.633951497070961 NA intron (NM_145070, intron 7 of 31) intron (NM_145070, intron 7 of 31) -4481 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-5 chr7 105751741 105752104 + 0.633951497070961 NA intron (NM_009906, intron 2 of 12) intron (NM_009906, intron 2 of 12) 313 NM_009906 12751 Mm.20837 NM_009906 ENSMUSG00000030894 Tpp1 Cln2|LPIC|TPP-1|TPP-I tripeptidyl peptidase I protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-8 chr16 18629577 18629868 + 0.633951497070961 NA intron (NM_213614, intron 1 of 11) CpG-5592 216 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-12 chr9 50899313 50899894 + 0.633951497070961 NA intron (NM_178710, intron 9 of 15) intron (NM_178710, intron 9 of 15) 42679 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-10 chr18 67309978 67310533 + 0.633951497070961 NA intron (NM_053261, intron 4 of 7) intron (NM_053261, intron 4 of 7) 21032 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_29_17_0.460607543756817_4.40022877332072_0.633951497070961-3 chr16 4595078 4595285 + 0.633951497070961 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 468 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-5 chr11 8539371 8539757 + 0.633951497070961 NA intron (NM_001083587, intron 9 of 30) intron (NM_001083587, intron 9 of 30) 124971 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-5 chr16 58523084 58523487 + 0.633951497070961 NA 5' UTR (NM_018784, exon 1 of 11) 5' UTR (NM_018784, exon 1 of 11) 141 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-3 chr10 77151905 77152326 + 0.633951497070961 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 14415 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-2 chr10 24571377 24571701 + 0.633951497070961 NA Intergenic Intergenic -23903 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-3 chr19 55794656 55795146 + 0.633951497070961 NA intron (NM_001331146, intron 4 of 14) intron (NM_001331146, intron 4 of 14) 53091 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-7 chr16 8829170 8829527 + 0.633951497070961 NA promoter-TSS (NM_001081400) promoter-TSS (NM_001081400) -752 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-10 chr7 133006041 133006521 + 0.633951497070961 NA intron (NM_001347623, intron 1 of 8) intron (NM_001347623, intron 1 of 8) 8966 NM_001170744 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-16 chr8 128683125 128683631 + 0.633951497070961 NA Intergenic Intergenic -2276 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-7 chr19 28663554 28663905 + 0.633951497070961 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -14495 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-7 chr7 47073919 47074512 + 0.633951497070961 NA Intergenic Intergenic 9009 NR_106023 102465639 NR_106023 ENSMUSG00000098960 Mir7056 Gm27696|mmu-mir-7056 microRNA 7056 ncRNA unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961 chr1 167394170 167394455 + 0.633951497070961 NA promoter-TSS (NM_025569) promoter-TSS (NM_025569) -515 NM_025569 66447 Mm.218286 NM_025569 ENSMUSG00000026688 Mgst3 2010012L10Rik|2010306B17Rik|2700004G04Rik|AA516734|GST-III microsomal glutathione S-transferase 3 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-8 chr5 137531421 137531749 + 0.633951497070961 NA intron (NM_010312, intron 1 of 9) CpG 1721 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-10 chr5 108669165 108669500 + 0.633951497070961 NA TTS (NM_174870) TTS (NM_174870) 5464 NM_001310692 231583 Mm.440571 NM_174870 ENSMUSG00000046959 Slc26a1 Sat1 solute carrier family 26 (sulfate transporter), member 1 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-9 chr6 124904637 124904890 + 0.633951497070961 NA intron (NM_008479, intron 7 of 7) intron (NM_008479, intron 7 of 7) 6942 NM_008479 16768 Mm.4528 NM_008479 ENSMUSG00000030124 Lag3 CD223|LAG-3|Ly66 lymphocyte-activation gene 3 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-8 chr16 45080182 45080778 + 0.633951497070961 NA Intergenic Intergenic -13531 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-4 chr14 30950874 30951252 + 0.633951497070961 NA promoter-TSS (NM_011849) promoter-TSS (NM_011849) -314 NM_001308328 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding unique_peak1_19_25_-0.650742775169418_4.37506833055638_0.633951497070961 chr2 128126455 128126699 + 0.633951497070961 NA promoter-TSS (NM_001284410) promoter-TSS (NM_001284410) 539 NM_009754 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-7 chr8 54607405 54607732 + 0.633951497070961 NA intron (NM_133711, intron 5 of 5) intron (NM_133711, intron 5 of 5) 6787 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-3 chr10 24164794 24165357 + 0.633951497070961 NA intron (NM_016797, intron 2 of 9) intron (NM_016797, intron 2 of 9) 15758 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-10 chr9 44487725 44488205 + 0.633951497070961 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) 5140 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961 chr1 155091754 155092126 + 0.633951497070961 NA Intergenic Intergenic 7696 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-5 chr14 76877128 76877361 + 0.633951497070961 NA Intergenic Intergenic 117113 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-9 chr3 66208317 66208840 + 0.633951497070961 NA intron (NM_145820, intron 5 of 13) intron (NM_145820, intron 5 of 13) -11309 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-14 chr5 142909807 142910159 + 0.633951497070961 NA Intergenic Intergenic -3229 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-4 chr4 123282844 123283219 + 0.633951497070961 NA 5' UTR (NM_001356377, exon 1 of 14) 5' UTR (NM_001356377, exon 1 of 14) 120 NM_130881 230721 Mm.277091 NM_130881 ENSMUSG00000011257 Pabpc4 - poly(A) binding protein, cytoplasmic 4 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-11 chr5 115279816 115280269 + 0.633951497070961 NA intron (NM_026504, intron 1 of 6) intron (NM_026504, intron 1 of 6) 340 NM_026504 52064 Mm.290142 NM_026504 ENSMUSG00000041733 Coq5 1810014G04Rik|D5Ertd33e coenzyme Q5 methyltransferase protein-coding unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-5 chr15 102517260 102517759 + 0.633951497070961 NA promoter-TSS (NM_009582) promoter-TSS (NM_009582) -505 NM_009582 26404 Mm.172897 NM_009582 ENSMUSG00000023050 Map3k12 DLK|MUK|Zpk mitogen-activated protein kinase kinase kinase 12 protein-coding common_peak1_20_25_-0.580850042548468_4.41001469686686_0.633951497070961 chr1 151341756 151342021 + 0.633951497070961 NA Intergenic Intergenic -2598 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-6 chr15 10771679 10771953 + 0.633951497070961 NA intron (NR_045063, intron 5 of 6) intron (NR_045063, intron 5 of 6) 56916 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak2_29_17_0.460607543756817_4.40022877332072_0.633951497070961-4 chr17 75210193 75210485 + 0.633951497070961 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 31558 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_19_25_-0.650742775169418_4.37506833055638_0.633951497070961 chr10 17633453 17633731 + 0.633951497070961 NA Intergenic Intergenic -89636 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961 chr1 131153239 131153646 + 0.633951497070961 NA intron (NM_010709, intron 1 of 14) intron (NM_010709, intron 1 of 14) 235 NM_010709 16865 Mm.276294 NM_010709 ENSMUSG00000026427 Eif2d D1Ertd5e|Lgtn eukaryotic translation initiation factor 2D protein-coding unique_peak1_20_25_-0.580850042548468_4.41001469686686_0.633951497070961 chr10 121461922 121462323 + 0.633951497070961 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 14128 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-4 chr10 87879674 87880059 + 0.633951497070961 NA intron (NM_001111274, intron 2 of 4) intron (NM_001111274, intron 2 of 4) 18755 NM_001111276 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-2 chr10 79792855 79793383 + 0.633951497070961 NA promoter-TSS (NM_001161747) promoter-TSS (NM_001161747) -453 NM_023128 18483 Mm.34650 NM_023128 ENSMUSG00000035863 Palm - paralemmin protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-2 chr11 97700111 97700564 + 0.633951497070961 NA promoter-TSS (NM_001163307) promoter-TSS (NM_001163307) 160 NM_009545 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-2 chr16 55529948 55530408 + 0.633951497070961 NA Intergenic Intergenic 35447 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-5 chr4 14825589 14826022 + 0.633951497070961 NA intron (NM_152812, intron 1 of 6) intron (NM_152812, intron 1 of 6) 782 NM_152812 72201 Mm.387724 NM_152812 ENSMUSG00000040550 Otud6b 2600013N14Rik|AU015433 OTU domain containing 6B protein-coding common_peak1_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-2 chr1 151427955 151428307 + 0.633951497070961 NA promoter-TSS (NM_001357569) promoter-TSS (NM_001357569) 304 NM_025819 66875 Mm.290905 NM_025819 ENSMUSG00000052748 Swt1 1200016B10Rik|C1orf26 SWT1 RNA endoribonuclease homolog (S. cerevisiae) protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-6 chr4 140699967 140700259 + 0.633951497070961 NA Intergenic Intergenic -1360 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-17 chr9 4308974 4309357 + 0.633951497070961 NA promoter-TSS (NM_026962) promoter-TSS (NM_026962) 329 NM_026276 67618 Mm.33970 NM_026276 ENSMUSG00000025894 Aasdhppt 2010309J24Rik|2810407B07Rik|AASD-PPT|CGI-80|LYS2|LYS5 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-2 chr1 193449782 193450197 + 0.633951497070961 NA Intergenic Intergenic 57541 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-8 chr9 58275612 58275959 + 0.633951497070961 NA Intergenic Intergenic 22621 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-2 chr13 49322012 49322302 + 0.633951497070961 NA Intergenic Intergenic -12949 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-12 chr3 132799232 132799818 + 0.633951497070961 NA intron (NM_001163455, intron 23 of 25) intron (NM_001163455, intron 23 of 25) 79071 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-5 chr8 26805803 26806002 + 0.633951497070961 NA Intergenic Intergenic 18521 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-2 chr1 170853026 170853511 + 0.633951497070961 NA intron (NM_001081304, intron 2 of 15) intron (NM_001081304, intron 2 of 15) 14503 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-9 chr9 6455871 6456074 + 0.633951497070961 NA Intergenic Intergenic -189425 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-9 chrX 134541586 134542090 + 0.633951497070961 NA promoter-TSS (NM_013898).2 promoter-TSS (NM_013898).2 -168 NM_013898 30058 Mm.214504 NM_013898 ENSMUSG00000048007 Timm8a1 DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a translocase of inner mitochondrial membrane 8A1 protein-coding common_peak2_29_17_0.460607543756817_4.40022877332072_0.633951497070961 chr13 49299596 49299873 + 0.633951497070961 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 9474 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-5 chr13 63251080 63251534 + 0.633951497070961 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 11278 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-6 chr6 128296284 128296802 + 0.633951497070961 NA intron (NM_001080979, intron 1 of 10) intron (NM_001080979, intron 1 of 10) 4270 NM_001080979 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-3 chr12 71889412 71889774 + 0.633951497070961 NA promoter-TSS (NM_001286452) promoter-TSS (NM_001286452) 50 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961 chr1 172026709 172027215 + 0.633951497070961 NA intron (NM_033509, intron 1 of 7) intron (NM_033509, intron 1 of 7) 333 NM_033509 93840 Mm.36148 NM_033509 ENSMUSG00000026556 Vangl2 C530001F03Rik|Lootl|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska|stbm|strabismus VANGL planar cell polarity 2 protein-coding common_peak1_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-3 chr2 105904057 105904387 + 0.633951497070961 NA promoter-TSS (NM_028260) promoter-TSS (NM_028260) 342 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding common_peak2_29_17_0.460607543756817_4.40022877332072_0.633951497070961-2 chr14 63543626 63543908 + 0.633951497070961 NA 5' UTR (NM_177594, exon 1 of 10) 5' UTR (NM_177594, exon 1 of 10) 186 NM_177594 210376 Mm.441613 NM_177594 ENSMUSG00000035078 Mtmr9 9430075G12Rik|AA516943|AF073881|LIP-STYX|MTMR8|mMTMH3 myotubularin related protein 9 protein-coding common_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-4 chr15 51877490 51877776 + 0.633951497070961 NA exon (NM_030132, exon 1 of 3) exon (NM_030132, exon 1 of 3) 192 NM_030132 78581 Mm.176347 NM_030132 ENSMUSG00000022313 Utp23 1700010I21Rik|AI662478|BB238373|D530033C11Rik UTP23 small subunit processome component protein-coding unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-4 chr11 94549012 94549288 + 0.633951497070961 NA promoter-TSS (NM_001013381) promoter-TSS (NM_001013381) 57 NM_001013381 237926 Mm.342275 NM_001013381 ENSMUSG00000039096 Rsad1 B430319G23|BC056485 radical S-adenosyl methionine domain containing 1 protein-coding common_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-15 chr8 95010797 95011150 + 0.633951497070961 NA intron (NM_018882, intron 12 of 13) intron (NM_018882, intron 12 of 13) -6719 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding unique_peak2_20_25_-0.580850042548468_4.41001469686686_0.633951497070961-4 chr11 49244187 49244487 + 0.633951497070961 NA 5' UTR (NM_010794, exon 1 of 3) 5' UTR (NM_010794, exon 1 of 3) 146 NM_001110148 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_29_17_0.460607543756817_4.40022877332072_0.633951497070961-5 chr4 147936439 147936690 + 0.633951497070961 NA intron (NM_011122, intron 1 of 18) CpG 212 NM_011122 18822 Mm.23951 NM_011122 ENSMUSG00000019055 Plod1 2410042F05Rik|AI854890|AV007929|Lh1|Plod procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 protein-coding common_peak1_29_17_0.460607543756817_4.40022877332072_0.633951497070961-8 chr4 117886866 117887254 + 0.633951497070961 NA intron (NM_033617, intron 1 of 7) CpG 269 NM_033617 114143 Mm.207052 NM_033617 ENSMUSG00000033379 Atp6v0b 2310024H13Rik|Atp6f|VMA16 ATPase, H+ transporting, lysosomal V0 subunit B protein-coding unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961 chr1 131020920 131021503 + 0.633951497070961 NA intron (NM_010548, intron 2 of 4) intron (NM_010548, intron 2 of 4) 1366 NM_010548 16153 Mm.874 NM_010548 ENSMUSG00000016529 Il10 CSIF|Il-10 interleukin 10 protein-coding unique_peak2_19_25_-0.650742775169418_4.37506833055638_0.633951497070961-6 chr2 132607768 132608203 + 0.633951497070961 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 9789 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA common_peak1_207_147_0.194919870106431_7.30691330068217_0.63389180575909 chr8 122223991 122225516 + 0.63389180575909 NA Intergenic Intergenic -57388 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_125_86_0.243371822824863_6.56462940726116_0.633519138992805 chr4 141874113 141875603 + 0.633519138992805 NA promoter-TSS (NM_025994) promoter-TSS (NM_025994) 62 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_125_86_0.243371822824863_6.56462940726116_0.633519138992805-2 chr8 110815879 110816942 + 0.633519138992805 NA intron (NM_133953, intron 18 of 25) intron (NM_133953, intron 18 of 25) -10486 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_104_103_-0.275303102941077_6.56278816667055_0.633519138992805 chr3 122047754 122049085 + 0.633519138992805 NA intron (NM_007378, intron 1 of 49) intron (NM_007378, intron 1 of 49) 3959 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_118_115_-0.253546067790234_6.73120796123245_0.633296424023813 chr8 126596551 126597332 + 0.633296424023813 NA Intergenic Intergenic -3505 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_140_97_0.232732081841057_6.73107588503574_0.633296424023813 chr11 75732939 75734260 + 0.633296424023813 NA intron (NM_009536, intron 1 of 5) CpG 712 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding common_peak2_147_141_-0.232896337593728_7.03329895070782_0.632875226552809-2 chr9 57433338 57435288 + 0.632875226552809 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 5423 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_147_141_-0.232896337593728_7.03329895070782_0.632875226552809 chr8 122525180 122526562 + 0.632875226552809 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 25458 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak1_111_76_0.250802593950535_6.39218783767017_0.632423066399087-2 chr7 64871894 64872929 + 0.632423066399087 NA exon (NM_023239, exon 1 of 1) exon (NM_023239, exon 1 of 1) 629 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak1_111_76_0.250802593950535_6.39218783767017_0.632423066399087 chr11 120255963 120256955 + 0.632423066399087 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 23512 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_112_76_0.263536160965351_6.39855462117758_0.632423066399087 chr8 13643907 13644842 + 0.632423066399087 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 33213 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_92_92_-0.287873669327794_6.39522197644413_0.632423066399062-2 chr2 126152164 126153102 + 0.632423066399062 NA promoter-TSS (NM_029455) promoter-TSS (NM_029455) 492 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_92_92_-0.287873669327794_6.39522197644413_0.632423066399062 chr17 6172304 6173421 + 0.632423066399062 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 34714 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_92_92_-0.287873669327794_6.39522197644413_0.632423066399062 chr19 53944897 53945702 + 0.632423066399062 NA promoter-TSS (NM_001195338) promoter-TSS (NM_001195338) 423 NM_019658 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak2_75_49_0.318252285197178_5.80298233237331_0.632401539335832 chr4 43396727 43397176 + 0.632401539335832 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -9551 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_74_49_0.299278274605038_5.79349532707724_0.632401539335832 chr2 109695067 109695844 + 0.632401539335832 NA intron (NM_001285417, intron 1 of 1) intron (NM_001285417, intron 1 of 1) 1046 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak1_59_62_-0.353802357874032_5.8003787445629_0.632401539335832 chr2 122117657 122118291 + 0.632401539335832 NA intron (NM_145531, intron 1 of 39) intron (NM_145531, intron 1 of 39) 412 NM_145531 214585 Mm.222303 NM_145531 ENSMUSG00000033396 Spg11 6030465E24Rik|A330015I11|C530005A01Rik SPG11, spatacsin vesicle trafficking associated protein-coding common_peak1_75_49_0.318252285197178_5.80298233237331_0.632401539335832 chr16 92684929 92686336 + 0.632401539335832 NA intron (NM_001111022, intron 4 of 6) intron (NM_001111022, intron 4 of 6) 11697 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_75_49_0.318252285197178_5.80298233237331_0.632401539335832-2 chr7 49329279 49330160 + 0.632401539335832 NA intron (NM_175272, intron 1 of 37) RLTR17B_Mm|LTR|ERVK 83530 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_59_62_-0.353802357874032_5.8003787445629_0.632401539335832 chr6 83027410 83028592 + 0.632401539335832 NA intron (NM_033079, intron 8 of 9) intron (NM_033079, intron 8 of 9) 5470 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak1_75_49_0.318252285197178_5.80298233237331_0.632401539335832-3 chr8 81865120 81865801 + 0.632401539335832 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 522898 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_156_109_0.220057597499746_6.89138851227453_0.632145354087965 chr16 65815148 65816627 + 0.632145354087965 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 254 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak1_132_128_-0.247459730877221_6.88749738998464_0.632145354087965 chr11 94320873 94322312 + 0.632145354087965 NA intron (NM_001361574, intron 1 of 9) CpG 371 NR_155069 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding common_peak1_132_128_-0.247459730877221_6.88749738998464_0.632145354087965-2 chr15 98566865 98567707 + 0.632145354087965 NA promoter-TSS (NR_028442) promoter-TSS (NR_028442) -38 NR_028442 100048895 Mm.471074 NR_028442 9330020H09Rik - RIKEN cDNA 9330020H09 gene ncRNA common_peak2_217_201_-0.186571577196593_7.5649256941535_0.632143705735556 chr15 102016356 102017813 + 0.632143705735556 NA Intergenic Intergenic -11132 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak2_236_218_-0.183438770671687_7.68306767426533_0.631445666800022 chr9 49796875 49798962 + 0.631445666800022 NA intron (NM_010875, intron 1 of 15) CpG 1151 NM_001113204 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_267_193_0.167530216306772_7.68367795034051_0.631445666800022 chr2 24472721 24475351 + 0.631445666800022 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 1563 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354 chr10 93589223 93589629 + 0.631311512744354 NA promoter-TSS (NR_045810) promoter-TSS (NR_045810) 13 NR_045810 74454 Mm.410794 NR_045810 ENSMUSG00000097407 4933408J17Rik - RIKEN cDNA 4933408J17 gene ncRNA common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-2 chr18 61359952 61360640 + 0.631311512744354 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 37604 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-3 chr2 117048885 117049439 + 0.631311512744354 NA Intergenic Intergenic -71909 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak1_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-2 chr3 41742767 41743220 + 0.631311512744354 NA promoter-TSS (NM_001081411) promoter-TSS (NM_001081411) 375 NM_027271 73852 Mm.29006 NM_027271 ENSMUSG00000025766 D3Ertd751e 2810009O15Rik|4930415G15Rik DNA segment, Chr 3, ERATO Doi 751, expressed protein-coding common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-5 chr5 114369601 114370240 + 0.631311512744354 NA intron (NM_001159941, intron 3 of 6) intron (NM_001159941, intron 3 of 6) 10585 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-7 chr6 29768557 29769024 + 0.631311512744354 NA exon (NM_021414, exon 1 of 17) exon (NM_021414, exon 1 of 17) 347 NM_001171000 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-4 chr3 41742768 41743225 + 0.631311512744354 NA promoter-TSS (NM_001081411) promoter-TSS (NM_001081411) 378 NM_027271 73852 Mm.29006 NM_027271 ENSMUSG00000025766 D3Ertd751e 2810009O15Rik|4930415G15Rik DNA segment, Chr 3, ERATO Doi 751, expressed protein-coding common_peak1_33_38_-0.475571361525797_5.04761653809935_0.631311512744354 chr11 97436146 97436650 + 0.631311512744354 NA Intergenic Intergenic -13762 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354 chr8 115757403 115757812 + 0.631311512744354 NA Intergenic Intergenic -50713 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_33_38_-0.475571361525797_5.04761653809935_0.631311512744354-6 chr5 135008488 135008915 + 0.631311512744354 NA promoter-TSS (NM_001190437) promoter-TSS (NM_001190437) -451 NM_001190437 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_45_28_0.384872306668683_5.05041714846191_0.631311512744348 chr1 92799951 92800330 + 0.631311512744348 NA Intergenic Intergenic -31505 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348-2 chr5 144014148 144014954 + 0.631311512744348 NA intron (NM_177682, intron 1 of 14) intron (NM_177682, intron 1 of 14) 302 NM_177682 231874 Mm.320432 NM_177682 ENSMUSG00000029617 Ccz1 AU022870 CCZ1 vacuolar protein trafficking and biogenesis associated protein-coding common_peak2_45_28_0.384872306668683_5.05041714846191_0.631311512744348-3 chr19 38004280 38004674 + 0.631311512744348 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 39100 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348 chr11 68539739 68540419 + 0.631311512744348 NA intron (NM_001004435, intron 14 of 19) intron (NM_001004435, intron 14 of 19) -16107 NM_146004 215723 Mm.131205 NM_146004 ENSMUSG00000048329 Mfsd6l - major facilitator superfamily domain containing 6-like protein-coding common_peak2_45_28_0.384872306668683_5.05041714846191_0.631311512744348-5 chr4 72200134 72200553 + 0.631311512744348 NA promoter-TSS (NR_027923) promoter-TSS (NR_027923) 550 NM_011599 21885 Mm.278444 NM_011599 ENSMUSG00000008305 Tle1 C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l transducin-like enhancer of split 1 protein-coding common_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348-5 chr8 88282665 88283274 + 0.631311512744348 NA promoter-TSS (NM_001109756) promoter-TSS (NM_001109756) -23 NM_001109756 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348 chr5 121836197 121836762 + 0.631311512744348 NA promoter-TSS (NM_001306126) promoter-TSS (NM_001306126) -375 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak2_45_28_0.384872306668683_5.05041714846191_0.631311512744348-4 chr2 112455155 112455427 + 0.631311512744348 NA exon (NM_133749, exon 1 of 5) exon (NM_133749, exon 1 of 5) 266 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding common_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348-3 chr6 33869609 33870245 + 0.631311512744348 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -159521 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak2_45_28_0.384872306668683_5.05041714846191_0.631311512744348-6 chr7 82404906 82405325 + 0.631311512744348 NA intron (NM_001190374, intron 3 of 29) intron (NM_001190374, intron 3 of 29) 69421 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348-4 chr7 89980074 89980492 + 0.631311512744348 NA intron (NM_021876, intron 1 of 11) CpG 693 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding unique_peak1_45_28_0.384872306668683_5.05041714846191_0.631311512744348-2 chr6 31124123 31124713 + 0.631311512744348 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -61325 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_45_28_0.384872306668683_5.05041714846191_0.631311512744348-2 chr11 76135122 76135565 + 0.631311512744348 NA intron (NM_026664, intron 6 of 21) intron (NM_026664, intron 6 of 21) 44287 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak2_218_202_-0.18713985896504_7.57176598770266_0.630398672790023 chr5 36379658 36381814 + 0.630398672790023 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 17403 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak2_290_210_0.164291988358102_7.80324518288624_0.630345671252505 chr4 63065965 63067925 + 0.630345671252505 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 87227 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-4 chr12 109441140 109441424 + 0.630231561310125 NA Intergenic Intergenic -11541 NR_033813 13386 Mm.157069 NM_010052 ENSMUSG00000040856 Dlk1 AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1 delta like non-canonical Notch ligand 1 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-19 chr9 44320011 44320219 + 0.630231561310125 NA 5' UTR (NM_027909, exon 1 of 14) 5' UTR (NM_027909, exon 1 of 14) 167 NM_001359259 71764 Mm.491174 NM_027909 ENSMUSG00000032120 C2cd2l 1300006O23Rik|Tmem24 C2 calcium-dependent domain containing 2-like protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-36 chr9 59655628 59655945 + 0.630231561310125 NA promoter-TSS (NM_011099) promoter-TSS (NM_011099) -582 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-16 chr7 19573466 19573747 + 0.630231561310125 NA promoter-TSS (NM_027189) promoter-TSS (NM_027189) -263 NM_027189 69731 Mm.24540 NM_027189 ENSMUSG00000044709 Gemin7 2400008I04Rik|AI120175|AI461688 gem nuclear organelle associated protein 7 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-27 chr6 99063336 99063601 + 0.630231561310125 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -35170 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-8 chr18 60992638 60992827 + 0.630231561310125 NA Intergenic Intergenic 21467 NM_201353 240332 Mm.39846 NM_201353 ENSMUSG00000052026 Slc6a7 AW455934|PROT solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-14 chr18 75664398 75664638 + 0.630231561310125 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 33178 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-4 chr11 88552031 88552547 + 0.630231561310125 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -66962 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-6 chr15 41311239 41311620 + 0.630231561310125 NA Intergenic Intergenic -136053 NR_152565 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-24 chr4 31642602 31642807 + 0.630231561310125 NA Intergenic Intergenic -321403 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_17_9_0.576838133358587_3.61034716156666_0.630231561310125-3 chr14 66266643 66266866 + 0.630231561310125 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 14298 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-18 chr3 15200153 15200385 + 0.630231561310125 NA Intergenic Intergenic 132033 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-4 chr13 92355249 92355478 + 0.630231561310125 NA promoter-TSS (NM_010829) promoter-TSS (NM_010829) -360 NM_010829 17686 Mm.343101 NM_010829 ENSMUSG00000014850 Msh3 D13Em1|Rep-3|Rep3 mutS homolog 3 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-3 chr11 5297005 5297288 + 0.630231561310125 NA intron (NM_001080924, intron 2 of 8) intron (NM_001080924, intron 2 of 8) -35536 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-2 chr10 122919633 122919845 + 0.630231561310125 NA intron (NM_001110218, intron 8 of 9) intron (NM_001110218, intron 8 of 9) 65985 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-22 chr3 131564969 131565308 + 0.630231561310125 NA promoter-TSS (NM_001289477) promoter-TSS (NM_001289477) 370 NM_001289478 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-8 chr16 23349422 23349765 + 0.630231561310125 NA intron (NM_001252505, intron 5 of 7) intron (NM_001252505, intron 5 of 7) 59123 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125 chr1 38438931 38439246 + 0.630231561310125 NA intron (NM_001290814, intron 4 of 21) intron (NM_001290814, intron 4 of 21) 188156 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-39 chr9 47408577 47408928 + 0.630231561310125 NA Intergenic Intergenic -121418 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-3 chr11 119976006 119976234 + 0.630231561310125 NA intron (NM_001037754, intron 3 of 13) intron (NM_001037754, intron 3 of 13) 33028 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-26 chr4 116301001 116301212 + 0.630231561310125 NA 3' UTR (NM_001355584, exon 11 of 11) 3' UTR (NM_001355584, exon 11 of 11) 78359 NM_001355586 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55|p55pik phosphoinositide-3-kinase regulatory subunit 3 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-30 chr6 6213613 6213970 + 0.630231561310125 NA intron (NM_001177572, intron 1 of 17) intron (NM_001177572, intron 1 of 17) 3382 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-10 chr5 105790826 105791051 + 0.630231561310125 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -85630 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-11 chr3 14534011 14534211 + 0.630231561310125 NA intron (NM_001163580, intron 1 of 18) intron (NM_001163580, intron 1 of 18) 323 NM_001163580 71710 Mm.257449 NM_028915 ENSMUSG00000027550 Lrrcc1 1200008A14Rik|4932441F23Rik|AI195358|AI447421 leucine rich repeat and coiled-coil domain containing 1 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-6 chr13 15625037 15625290 + 0.630231561310125 NA intron (NM_008130, intron 4 of 14) intron (NM_008130, intron 4 of 14) 161440 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-11 chr18 36528020 36528388 + 0.630231561310125 NA promoter-TSS (NM_001271546) promoter-TSS (NM_001271546) 52 NM_001271545 240215 Mm.135463 NM_172830 ENSMUSG00000024485 Slc4a9 AE4|D630003B07|D630024F24Rik solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-25 chr4 109419361 109419559 + 0.630231561310125 NA intron (NM_001145948, intron 2 of 17) intron (NM_001145948, intron 2 of 17) 3813 NM_001145948 230603 Mm.33091 NM_153392 ENSMUSG00000028555 Ttc39a 4922503N01Rik tetratricopeptide repeat domain 39A protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-20 chr4 5768880 5769148 + 0.630231561310125 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 44702 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-37 chr8 68103693 68103890 + 0.630231561310125 NA Intergenic Intergenic -129217 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-28 chr7 28928756 28929043 + 0.630231561310125 NA intron (NM_021895, intron 1 of 20) B1_Mus2|SINE|Alu 33433 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-23 chr3 146474866 146475107 + 0.630231561310125 NA intron (NM_001316756, intron 10 of 14) intron (NM_001316756, intron 10 of 14) 24519 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-35 chr7 116201986 116202295 + 0.630231561310125 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -3579 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-31 chr6 29362575 29362919 + 0.630231561310125 NA intron (NM_184053, intron 3 of 6) intron (NM_184053, intron 3 of 6) 14641 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-10 chr17 29342488 29342821 + 0.630231561310125 NA intron (NM_001357763, intron 2 of 11) intron (NM_001357763, intron 2 of 11) 4673 NM_001357762 56462 Mm.3224 NM_019880 ENSMUSG00000024012 Mtch1 2310034O17Rik|AI255158|AU018396|C77849|PSAP mitochondrial carrier 1 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-18 chr9 9236948 9237379 + 0.630231561310125 NA intron (NR_045754, intron 2 of 3) intron (NR_045754, intron 2 of 3) 875 NR_045754 100579151 Mm.412450 NR_045754 ENSMUSG00000085253 Gm16833 - predicted gene, 16833 ncRNA common_peak2_17_9_0.576838133358587_3.61034716156666_0.630231561310125 chr12 104415196 104415417 + 0.630231561310125 NA TTS (NM_009252) TTS (NM_009252) 8598 NM_009252 20716 Mm.482074 NM_009252 ENSMUSG00000021091 Serpina3n Spi2-2|Spi2.2|Spi2/eb.4 serine (or cysteine) peptidase inhibitor, clade A, member 3N protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-9 chr4 63054823 63055087 + 0.630231561310125 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 89381 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak1_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-2 chr18 60617870 60618202 + 0.630231561310125 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 6269 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-11 chr7 92463324 92463623 + 0.630231561310125 NA Intergenic Intergenic -97676 NM_025515 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-38 chrX 56682594 56682975 + 0.630231561310125 NA Intergenic Intergenic -48977 NM_010211 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-21 chr4 107457337 107457551 + 0.630231561310125 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 22725 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_17_9_0.576838133358587_3.61034716156666_0.630231561310125-4 chr14 66801721 66801961 + 0.630231561310125 NA Intergenic Intergenic 66759 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-9 chr15 43179155 43179379 + 0.630231561310125 NA Intergenic Intergenic -8449 NM_001357956 239405 Mm.193274 NM_172815 ENSMUSG00000051920 Rspo2 2610028F08Rik|AA673245|D430027K22|ftls R-spondin 2 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-15 chr2 25498193 25498538 + 0.630231561310125 NA TTS (NM_027062) TTS (NM_027062) 2141 NM_027062 69379 Mm.24596 NM_027062 ENSMUSG00000015083 C8g - complement component 8, gamma polypeptide protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-5 chr15 31453856 31454099 + 0.630231561310125 NA promoter-TSS (NM_145852) promoter-TSS (NM_145852) -288 NM_145852 252967 Mm.436668 NM_145852 ENSMUSG00000022236 Ropn1l ASP|AV047578|Akapasp ropporin 1-like protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-20 chr3 28734617 28734843 + 0.630231561310125 NA Intergenic Intergenic 36827 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-3 chr11 95104383 95104636 + 0.630231561310125 NA Intergenic Intergenic -15608 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125 chr10 24174227 24174548 + 0.630231561310125 NA intron (NM_016797, intron 2 of 9) intron (NM_016797, intron 2 of 9) 25070 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-18 chr2 30454022 30454229 + 0.630231561310125 NA Intergenic Intergenic 20074 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-8 chr15 41446795 41447083 + 0.630231561310125 NA promoter-TSS (NM_001358978) promoter-TSS (NM_001358978) -543 NR_152565 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-22 chr4 126151634 126151911 + 0.630231561310125 NA exon (NM_001162533, exon 14 of 16) exon (NM_001162533, exon 14 of 16) 3769 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-37 chr9 106281028 106281229 + 0.630231561310125 NA promoter-TSS (NM_027354) promoter-TSS (NM_027354) 67 NM_027354 70235 Mm.23054 NM_027354 ENSMUSG00000023345 Poc1a 2510040D07Rik|Wdr51a|cha POC1 centriolar protein A protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-12 chr17 83148643 83148956 + 0.630231561310125 NA Intergenic Intergenic -66484 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-29 chr7 65424962 65425197 + 0.630231561310125 NA Intergenic Intergenic -53835 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-30 chr7 84196731 84196949 + 0.630231561310125 NA Intergenic Intergenic -44947 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-17 chr2 6353014 6353355 + 0.630231561310125 NA intron (NM_181399, intron 1 of 13) intron (NM_181399, intron 1 of 13) 448 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-13 chr4 54945607 54945847 + 0.630231561310125 NA Intergenic Intergenic -2218 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-2 chr10 60687337 60687569 + 0.630231561310125 NA intron (NM_001252635, intron 1 of 68) CpG-1084 9037 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-15 chr19 40406912 40407120 + 0.630231561310125 NA intron (NM_001034962, intron 1 of 22) intron (NM_001034962, intron 1 of 22) -4706 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125 chr11 61505052 61505406 + 0.630231561310125 NA promoter-TSS (NM_013717) promoter-TSS (NM_013717) 85 NM_001330781 27078 Mm.261226 NM_013717 ENSMUSG00000001039 B9d1 AW045994|B9|Eppb9 B9 protein domain 1 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-3 chr11 61577966 61578293 + 0.630231561310125 NA intron (NM_001252188, intron 1 of 10) intron (NM_001252188, intron 1 of 10) 1558 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-38 chr8 76912506 76912752 + 0.630231561310125 NA intron (NM_001083906, intron 2 of 8) intron (NM_001083906, intron 2 of 8) 10121 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-12 chr18 52636368 52636579 + 0.630231561310125 NA intron (NM_001360984, intron 3 of 3) intron (NM_001360984, intron 3 of 3) -9747 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-8 chr3 27690460 27690720 + 0.630231561310125 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 19862 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-33 chr6 52951973 52952173 + 0.630231561310125 NA intron (NM_173406, intron 1 of 4) intron (NM_173406, intron 1 of 4) -42453 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-21 chr3 126848943 126849293 + 0.630231561310125 NA Intergenic Intergenic 94268 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-12 chr3 38145010 38145236 + 0.630231561310125 NA Intergenic Intergenic 62996 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-16 chr19 46961039 46961314 + 0.630231561310125 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) 1175 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-7 chr15 6411039 6411265 + 0.630231561310125 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 24404 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-4 chr13 33004839 33005050 + 0.630231561310125 NA intron (NM_009256, intron 1 of 6) intron (NM_009256, intron 1 of 6) 403 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-23 chr4 128806447 128806655 + 0.630231561310125 NA promoter-TSS (NM_001081098) promoter-TSS (NM_001081098) -439 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding common_peak2_17_9_0.576838133358587_3.61034716156666_0.630231561310125-6 chr8 18630225 18630465 + 0.630231561310125 NA intron (NM_173189, intron 7 of 13) intron (NM_173189, intron 7 of 13) 35214 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-7 chr2 101827656 101827891 + 0.630231561310125 NA intron (NM_001355625, intron 1 of 8) intron (NM_001355625, intron 1 of 8) 11207 NM_001110849 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-11 chr17 46948172 46948532 + 0.630231561310125 NA intron (NM_146078, intron 34 of 46) URR1A|DNA|hAT-Charlie 37867 NM_008938 19133 Mm.291370 NM_008938 ENSMUSG00000023978 Prph2 AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds peripherin 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-36 chr7 120865311 120865628 + 0.630231561310125 NA intron (NM_001267710, intron 2 of 17) intron (NM_001267710, intron 2 of 17) 14280 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-17 chr2 165788272 165788566 + 0.630231561310125 NA intron (NM_027230, intron 22 of 23) B1_Mus1|SINE|Alu 69754 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-13 chr7 134288484 134288695 + 0.630231561310125 NA intron (NM_001081331, intron 5 of 7) intron (NM_001081331, intron 5 of 7) -63492 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-7 chr17 14993086 14993479 + 0.630231561310125 NA intron (NM_198104, intron 1 of 3) CpG 14418 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-34 chr6 89650358 89650690 + 0.630231561310125 NA intron (NM_153162, intron 1 of 15) intron (NM_153162, intron 1 of 15) 6536 NM_001178059 232223 Mm.229332 NM_153162 ENSMUSG00000000811 Txnrd3 AI196535|TGR|TR2 thioredoxin reductase 3 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-5 chr15 38721704 38722019 + 0.630231561310125 NA intron (NR_131206, intron 1 of 2) intron (NR_131206, intron 1 of 2) 6655 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-15 chr6 113045920 113046116 + 0.630231561310125 NA promoter-TSS (NM_001355266) promoter-TSS (NM_001355266) -284 NM_001355266 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-24 chr4 140630542 140630784 + 0.630231561310125 NA intron (NM_001290803, intron 1 of 28) intron (NM_001290803, intron 1 of 28) 18093 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-39 chrX 169982875 169983126 + 0.630231561310125 NA intron (NM_010797, intron 5 of 9) intron (NM_010797, intron 5 of 9) -4083 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-32 chr7 89580444 89580713 + 0.630231561310125 NA Intergenic Intergenic -52240 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-6 chr15 77219722 77220043 + 0.630231561310125 NA intron (NM_001358772, intron 2 of 14) MER5A|DNA|hAT-Charlie 25726 NM_001358772 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-7 chr15 59824003 59824275 + 0.630231561310125 NA Intergenic Intergenic -29180 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-10 chr16 92734963 92735356 + 0.630231561310125 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) -37830 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-16 chr2 137111116 137111401 + 0.630231561310125 NA intron (NM_013822, intron 2 of 25) intron (NM_013822, intron 2 of 25) 5262 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125 chr10 86778186 86778422 + 0.630231561310125 NA promoter-TSS (NM_175331) promoter-TSS (NM_175331) -701 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-2 chr11 74648804 74649157 + 0.630231561310125 NA promoter-TSS (NM_001081158) promoter-TSS (NM_001081158) -515 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak1_10_15_-0.806714638256451_3.59664268087177_0.630231561310125 chr12 25100756 25100957 + 0.630231561310125 NA Intergenic CpG -4764 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-14 chr9 92275240 92275457 + 0.630231561310125 NA promoter-TSS (NM_008880) promoter-TSS (NM_008880) -254 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-28 chr5 18307023 18307401 + 0.630231561310125 NA intron (NM_010305, intron 3 of 7) intron (NM_010305, intron 3 of 7) 53201 NM_010305 14677 Mm.254629 NM_010305 ENSMUSG00000057614 Gnai1 AU046200|Gialpha1|Gnai-1 guanine nucleotide binding protein (G protein), alpha inhibiting 1 protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-2 chr11 68692088 68692299 + 0.630231561310125 NA intron (NM_175260, intron 1 of 40) CpG 278 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-34 chr8 126390991 126391210 + 0.630231561310125 NA exon (NM_175434, exon 6 of 7) exon (NM_175434, exon 6 of 7) -31401 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-19 chr2 125305266 125305536 + 0.630231561310125 NA intron (NM_007993, intron 64 of 65) B1_Mur3|SINE|Alu 57886 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-25 chr5 131220366 131220702 + 0.630231561310125 NA intron (NM_145218, intron 1 of 10) intron (NM_145218, intron 1 of 10) 86988 NM_145218 212996 Mm.299204 NM_145218 ENSMUSG00000034040 Wbscr17 AA388321|E330012B09Rik|Galnt17 Williams-Beuren syndrome chromosome region 17 homolog (human) protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-6 chr16 45095130 45095436 + 0.630231561310125 NA exon (NM_026439, exon 2 of 8) exon (NM_026439, exon 2 of 8) 1272 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-9 chr16 84735486 84735715 + 0.630231561310125 NA promoter-TSS (NM_017404) promoter-TSS (NM_017404) -298 NM_017404 27393 Mm.103655 NM_017404 ENSMUSG00000022889 Mrpl39 C21orf8|MRP-L5|ORF22|Rpml5 mitochondrial ribosomal protein L39 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-31 chr7 84530633 84530901 + 0.630231561310125 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 1813 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-13 chr18 24874454 24874827 + 0.630231561310125 NA intron (NM_001289654, intron 3 of 24) intron (NM_001289654, intron 3 of 24) 166017 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-14 chr5 100499880 100500174 + 0.630231561310125 NA intron (NM_001359914, intron 1 of 13) CpG 612 NM_172714 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-14 chr19 27365318 27365641 + 0.630231561310125 NA Intergenic Intergenic 42860 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-35 chr9 57073942 57074182 + 0.630231561310125 NA intron (NM_001110351, intron 1 of 21) intron (NM_001110351, intron 1 of 21) 1987 NR_152107 72588 Mm.70350 NR_152107 2700012I20Rik - RIKEN cDNA 2700012I20 gene ncRNA common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-9 chr2 29060740 29060956 + 0.630231561310125 NA intron (NM_009442, intron 1 of 11) intron (NM_009442, intron 1 of 11) 585 NM_009442 22130 Mm.252195 NM_009442 ENSMUSG00000026803 Ttf1 AV245725|TTF-1|TTF-I transcription termination factor, RNA polymerase I protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-10 chr2 101827450 101827697 + 0.630231561310125 NA intron (NM_001355625, intron 1 of 8) intron (NM_001355625, intron 1 of 8) 11407 NM_001110849 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-26 chr6 17073635 17074094 + 0.630231561310125 NA intron (NM_207176, intron 1 of 6) Lx5b|LINE|L1 8715 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-5 chr15 13370285 13370570 + 0.630231561310125 NA Intergenic Charlie29a|DNA|hAT-Charlie -196752 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-33 chr7 110524487 110524800 + 0.630231561310125 NA intron (NM_177324, intron 2 of 40) intron (NM_177324, intron 2 of 40) 90277 NM_177324 319934 Mm.102970 NM_177324 ENSMUSG00000038371 Sbf2 4833411B01Rik|AA414977|AI317167|B430219L04Rik|Mtmr13|mMTMH1 SET binding factor 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-13 chr18 56421044 56421383 + 0.630231561310125 NA intron (NM_001360917, intron 1 of 13) MIRc|SINE|MIR -10919 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-5 chr11 116086002 116086254 + 0.630231561310125 NA intron (NM_001361446, intron 1 of 6) intron (NM_001361446, intron 1 of 6) 867 NM_001361446 22378 Mm.284792 NM_016852 ENSMUSG00000034341 Wbp2 - WW domain binding protein 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-29 chr5 143036899 143037139 + 0.630231561310125 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 76001 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-32 chr6 50453374 50453703 + 0.630231561310125 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 2632 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-17 chr7 49332230 49332604 + 0.630231561310125 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 86228 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_17_9_0.576838133358587_3.61034716156666_0.630231561310125-27 chr4 150869326 150869599 + 0.630231561310125 NA TTS (NM_133753) TTS (NM_133753) 14392 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-19 chr3 88532773 88532993 + 0.630231561310125 NA intron (NM_001029890, intron 1 of 1) CpG 488 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding common_peak2_17_9_0.576838133358587_3.61034716156666_0.630231561310125-5 chr15 27772100 27772303 + 0.630231561310125 NA intron (NM_001081302, intron 36 of 56) intron (NM_001081302, intron 36 of 56) -90659 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_10_15_-0.806714638256451_3.59664268087177_0.630231561310125-12 chr7 100987385 100987701 + 0.630231561310125 NA Intergenic Intergenic -23177 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak2_17_9_0.576838133358587_3.61034716156666_0.630231561310125-2 chr13 38422335 38422543 + 0.630231561310125 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 39354 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA common_peak1_105_104_-0.275530441969506_6.57648029668137_0.630028288061319-2 chr8 54548647 54549666 + 0.630028288061319 NA Intergenic Intergenic -1175 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_105_104_-0.275530441969506_6.57648029668137_0.630028288061319 chr15 51864612 51865497 + 0.630028288061319 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 407 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_99_67_0.267781041328725_6.2213533619147_0.629493032588487 chr19 11769939 11771017 + 0.629493032588487 NA promoter-TSS (NM_025606) promoter-TSS (NM_025606) 63 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding common_peak2_134_129_-0.23721904294766_6.90375829155462_0.629368628758411-2 chr8 122575655 122576906 + 0.629368628758411 NA intron (NM_009698, intron 2 of 4) intron (NM_009698, intron 2 of 4) 627 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding common_peak2_134_129_-0.23721904294766_6.90375829155462_0.629368628758411 chr17 24072134 24073463 + 0.629368628758411 NA TTS (NM_011062) TTS (NM_011062) 687 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding common_peak1_522_388_0.121589581592533_8.66442113578246_0.62912864410049 chr10 60813318 60816953 + 0.62912864410049 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 16446 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_87_58_0.289477373661974_6.02738173619283_0.629057001794454-3 chr19 9071372 9072324 + 0.629057001794454 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 16108 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_70_72_-0.325203817173287_6.02722265029337_0.629057001794454 chr18 68057386 68058374 + 0.629057001794454 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 124707 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_87_58_0.289477373661974_6.02738173619283_0.629057001794454-2 chr15 77914843 77916011 + 0.629057001794454 NA 3' UTR (NM_019913, exon 4 of 4) 3' UTR (NM_019913, exon 4 of 4) 13567 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_87_58_0.289477373661974_6.02738173619283_0.629057001794454 chr10 59901092 59902178 + 0.629057001794454 NA Intergenic Intergenic 22044 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_87_58_0.289477373661974_6.02738173619283_0.629057001794454-4 chr7 112300173 112301203 + 0.629057001794454 NA intron (NM_001193305, intron 3 of 25) MIR|SINE|MIR -67620 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_70_72_-0.325203817173287_6.02722265029337_0.629057001794454 chr19 12005308 12005981 + 0.629057001794454 NA Intergenic Intergenic 31096 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak1_87_58_0.289477373661974_6.02738173619283_0.629057001794454-5 chr9 123478704 123479721 + 0.629057001794454 NA 5' UTR (NM_013860, exon 1 of 8) 5' UTR (NM_013860, exon 1 of 8) 511 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak2_87_58_0.289477373661974_6.02738173619283_0.629057001794454 chr12 59067093 59067755 + 0.629057001794454 NA intron (NM_008891, intron 1 of 8) CpG 505 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak1_279_255_-0.169808946173928_7.91509552691304_0.628944875148645 chr19 16921357 16924791 + 0.628944875148645 NA Intergenic Intergenic -33044 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_93_93_-0.287982527948827_6.41059758770322_0.628512678031267 chr5 8056024 8057216 + 0.628512678031267 NA promoter-TSS (NM_001080974) promoter-TSS (NM_001080974) 78 NM_001080974 109552 Mm.96211 NM_025618 ENSMUSG00000003161 Sri 2210417O06Rik|2900070H08Rik|Sor sorcin protein-coding common_peak1_113_77_0.257541858337108_6.4141731480308_0.628512678031267 chr14 75844005 75845039 + 0.628512678031267 NA promoter-TSS (NM_009429) promoter-TSS (NM_009429) 442 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak1_113_77_0.257541858337108_6.4141731480308_0.628512678031267-2 chr3 22076718 22077516 + 0.628512678031267 NA intron (NM_030732, intron 1 of 15) CpG 465 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_523_389_0.120622035546292_8.66764133152276_0.628321013522054 chr10 60813239 60816981 + 0.628321013522054 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 16471 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_166_157_-0.213908376150559_7.19682656010182_0.62814292805558 chr10 95562567 95564183 + 0.62814292805558 NA intron (NM_001358996, intron 1 of 4) CpG 771 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak2_150_143_-0.224327097185273_7.05776145284968_0.627875562968904 chr19 32711647 32713003 + 0.627875562968904 NA promoter-TSS (NM_026487) promoter-TSS (NM_026487) -27 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding common_peak1_174_123_0.202706621766319_7.05554962127003_0.627875562968904 chr3 121635267 121636539 + 0.627875562968904 NA non-coding (NR_036456, exon 4 of 4) non-coding (NR_036456, exon 4 of 4) 7582 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_65_42_0.333746250122417_5.59313787976331_0.62760443475974 chr13 110943183 110944189 + 0.62760443475974 NA Intergenic Intergenic -39840 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_65_42_0.333746250122417_5.59313787976331_0.62760443475974 chr14 26579435 26580081 + 0.62760443475974 NA exon (NM_001134465, exon 1 of 20) exon (NM_001134465, exon 1 of 20) 208 NM_145969 211922 Mm.260512 NM_145969 ENSMUSG00000040818 Dennd6a Fam116a DENN/MADD domain containing 6A protein-coding common_peak2_65_42_0.333746250122417_5.59313787976331_0.62760443475974 chr1 119503982 119504577 + 0.62760443475974 NA intron (NM_022327, intron 1 of 4) intron (NM_022327, intron 1 of 4) 503 NM_022327 64143 Mm.27832 NM_022327 ENSMUSG00000004451 Ralb 5730472O18Rik v-ral simian leukemia viral oncogene B protein-coding common_peak1_65_42_0.333746250122417_5.59313787976331_0.62760443475974-2 chr2 167865970 167866838 + 0.62760443475974 NA Intergenic Intergenic -65923 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_65_42_0.333746250122417_5.59313787976331_0.62760443475974-2 chr19 28964011 28964637 + 0.62760443475974 NA promoter-TSS (NM_198651) promoter-TSS (NM_198651) -170 NM_198651 381218 Mm.280653 NM_198651 ENSMUSG00000064202 4430402I18Rik AW122618|Spata6l RIKEN cDNA 4430402I18 gene protein-coding common_peak1_50_54_-0.390693253960753_5.58601308654428_0.62760443475974 chr18 32837144 32838222 + 0.62760443475974 NA promoter-TSS (NR_045381) promoter-TSS (NR_045381) -396 NR_045381 75795 Mm.382634 NR_045381 ENSMUSG00000097553 4930455D15Rik - RIKEN cDNA 4930455D15 gene ncRNA common_peak2_65_42_0.333746250122417_5.59313787976331_0.62760443475974-3 chr2 38286405 38287366 + 0.62760443475974 NA intron (NM_146122, intron 1 of 21) CpG 499 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding common_peak1_65_42_0.333746250122417_5.59313787976331_0.62760443475974-3 chr9 54642921 54643824 + 0.62760443475974 NA intron (NM_053178, intron 1 of 13) MER91C|DNA|hAT-Tip100 18513 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak2_120_117_-0.254332288385517_6.75547690516908_0.62712889994118 chr8 104383102 104384222 + 0.62712889994118 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 12145 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak2_220_204_-0.188261071078164_7.58534956396636_0.626963246979344 chr19 6909019 6911203 + 0.626963246979344 NA promoter-TSS (NM_001358444) promoter-TSS (NM_001358444) -5 NM_001358444 54683 Mm.279782 NM_012021 ENSMUSG00000024953 Prdx5 AOEB166|AOPP|PLP|Pmp20|Prdx6|PrxV peroxiredoxin 5 protein-coding common_peak1_128_88_0.244289721897245_6.59787829191502_0.626610071870367 chr2 24453544 24455493 + 0.626610071870367 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 21081 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_128_88_0.244289721897245_6.59787829191502_0.626610071870367-2 chr6 85960628 85961662 + 0.626610071870367 NA intron (NM_028099, intron 1 of 8) CpG 522 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding common_peak1_128_88_0.244289721897245_6.59787829191502_0.626610071870367-3 chr8 123042605 123043377 + 0.626610071870367 NA promoter-TSS (NR_037865) promoter-TSS (NR_037865) 416 NR_045268 100503178 Mm.294938 NR_045268 ENSMUSG00000099881 2810013P06Rik - RIKEN cDNA 2810013P06 gene ncRNA common_peak1_106_105_-0.27575441753404_6.59004324579618_0.626610071870342 chr13 42549558 42550846 + 0.626610071870342 NA Intergenic Intergenic -130597 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_106_105_-0.27575441753404_6.59004324579618_0.626610071870342-2 chr7 28337943 28339181 + 0.626610071870342 NA intron (NM_013676, intron 1 of 29) CpG-12904 157 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak2_107_105_-0.262428583236284_6.59670616294506_0.626610071870342 chr12 100778685 100779779 + 0.626610071870342 NA 5' UTR (NM_001361020, exon 1 of 14) 5' UTR (NM_001361020, exon 1 of 14) 175 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding common_peak2_76_50_0.308409110199694_5.82662989707134_0.626510224444022 chr4 63544828 63545284 + 0.626510224444022 NA intron (NM_024173, intron 1 of 2) CpG 291 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak2_76_50_0.308409110199694_5.82662989707134_0.626510224444022-2 chr6 88972096 88972883 + 0.626510224444022 NA Intergenic Intergenic 70238 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_76_50_0.308409110199694_5.82662989707134_0.626510224444022-3 chr8 26975066 26975670 + 0.626510224444022 NA Intergenic B1F|SINE|Alu -1968 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak1_76_50_0.308409110199694_5.82662989707134_0.626510224444022 chr11 30771454 30772398 + 0.626510224444022 NA 5' UTR (NM_134013, exon 1 of 47) 5' UTR (NM_134013, exon 1 of 47) 151 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding common_peak2_60_63_-0.352843930697124_5.82357803465144_0.62651022444401 chr2 94044923 94045820 + 0.62651022444401 NA exon (NM_019657, exon 8 of 11) exon (NM_019657, exon 8 of 11) -34641 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak2_60_63_-0.352843930697124_5.82357803465144_0.62651022444401-3 chr9 121719357 121719879 + 0.62651022444401 NA intron (NM_010918, intron 2 of 16) CpG-15515 437 NM_010918 18087 Mm.32842 NM_010918 ENSMUSG00000032525 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence protein-coding common_peak1_60_63_-0.352843930697124_5.82357803465144_0.62651022444401-3 chr3 27689821 27690839 + 0.62651022444401 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 20122 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_60_63_-0.352843930697124_5.82357803465144_0.62651022444401-2 chr8 105826411 105827109 + 0.62651022444401 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) 590 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak1_60_63_-0.352843930697124_5.82357803465144_0.62651022444401-2 chr14 8304995 8306403 + 0.62651022444401 NA intron (NM_001360337, intron 1 of 4) intron (NM_001360337, intron 1 of 4) 4078 NM_183187 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding common_peak1_60_63_-0.352843930697124_5.82357803465144_0.62651022444401 chr10 29312622 29313384 + 0.62651022444401 NA promoter-TSS (NM_025855) promoter-TSS (NM_025855) -163 NM_001110195 52665 Mm.28930 NM_025855 ENSMUSG00000019883 Echdc1 1700028A24Rik|AI314462|AI930038|D10Ertd667e|MMCD enoyl Coenzyme A hydratase domain containing 1 protein-coding common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-3 chr17 78362929 78363517 + 0.626414924887874 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 54929 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_42_46_-0.408346321468206_5.35041569094354_0.626414924887874 chr7 19377936 19378509 + 0.626414924887874 NA 3' UTR (NM_001010836, exon 13 of 13) 3' UTR (NM_001010836, exon 13 of 13) -3817 NM_007949 13871 Mm.36524 NM_007949 ENSMUSG00000030400 Ercc2 AA407812|AU020867|AW240756|CXPD|Ercc-2|Mhdarco15|RCO015|XPD excision repair cross-complementing rodent repair deficiency, complementation group 2 protein-coding common_peak1_41_46_-0.442054155658258_5.33356177384851_0.626414924887874 chr19 59878970 59879482 + 0.626414924887874 NA Intergenic Intergenic 64138 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-2 chr2 130274485 130275096 + 0.626414924887874 NA promoter-TSS (NR_028547) promoter-TSS (NR_028547) 378 NR_149733 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-2 chr16 31948692 31949381 + 0.626414924887874 NA promoter-TSS (NR_027897) promoter-TSS (NR_027897) 490 NM_026554 68092 Mm.290027 NM_026554 ENSMUSG00000022774 Ncbp2 20kDa|5930413E18Rik|AA536802|AI843301|C79367 nuclear cap binding protein subunit 2 protein-coding common_peak1_42_46_-0.408346321468206_5.35041569094354_0.626414924887874 chr4 137489028 137489981 + 0.626414924887874 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 20701 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-7 chr9 79792723 79793302 + 0.626414924887874 NA promoter-TSS (NR_040734) promoter-TSS (NR_040734) 418 NM_133718 69981 Mm.486324 NM_133718 ENSMUSG00000032328 Tmem30a 2010200I23Rik|AW540225|Cdc50a|D9Wsu20e transmembrane protein 30A protein-coding common_peak1_42_46_-0.408346321468206_5.35041569094354_0.626414924887874-2 chr7 16286430 16286811 + 0.626414924887874 NA intron (NM_001136471, intron 1 of 13) CpG 175 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-6 chr8 26832294 26833026 + 0.626414924887874 NA Intergenic Intergenic -8237 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-5 chr6 87042060 87042546 + 0.626414924887874 NA promoter-TSS (NM_013528) promoter-TSS (NM_013528) -543 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak1_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-3 chr6 91684219 91684504 + 0.626414924887874 NA intron (NM_009320, intron 1 of 14) CpG 294 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874 chr10 17013614 17014105 + 0.626414924887874 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 81923 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_41_46_-0.442054155658258_5.33356177384851_0.626414924887874-4 chr5 64173857 64174424 + 0.626414924887874 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) 13880 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_55_35_0.354719112776368_5.3472845578305_0.626414924887867-4 chr4 155085714 155086361 + 0.626414924887867 NA promoter-TSS (NM_001081100) promoter-TSS (NM_001081100) 260 NM_026395 67830 Mm.241604 NM_026395 ENSMUSG00000029048 Rer1 1110060F11Rik|5830454N22Rik|AU043380 retention in endoplasmic reticulum sorting receptor 1 protein-coding unique_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867 chr19 4201018 4201507 + 0.626414924887867 NA intron (NM_011237, intron 2 of 10) intron (NM_011237, intron 2 of 10) 341 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867-6 chr9 35267955 35268494 + 0.626414924887867 NA promoter-TSS (NM_175411) promoter-TSS (NM_175411) 343 NM_028040 71989 Mm.273515 NM_028040 ENSMUSG00000032044 Rpusd4 2410001E19Rik RNA pseudouridylate synthase domain containing 4 protein-coding common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867-3 chr11 76911714 76912281 + 0.626414924887867 NA intron (NM_025655, intron 3 of 5) intron (NM_025655, intron 3 of 5) 7452 NM_025655 66601 Mm.25138 NM_025655 ENSMUSG00000020839 Tmigd1 2010002A20Rik|Tmigd transmembrane and immunoglobulin domain containing 1 protein-coding common_peak2_55_35_0.354719112776368_5.3472845578305_0.626414924887867-2 chr19 18747026 18747474 + 0.626414924887867 NA Intergenic Intergenic -2733 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_55_35_0.354719112776368_5.3472845578305_0.626414924887867 chr12 104067387 104068033 + 0.626414924887867 NA Intergenic Intergenic -10249 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867 chr10 82858031 82858842 + 0.626414924887867 NA promoter-TSS (NM_015762) promoter-TSS (NM_015762) -770 NM_001042513 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867-5 chr6 8259339 8259845 + 0.626414924887867 NA promoter-TSS (NM_026632) promoter-TSS (NM_026632) 304 NM_001302353 100036521 Mm.446106 NM_001302353 ENSMUSG00000089862 Umad1 Gm16039 UMAP1-MVP12 associated (UMA) domain containing 1 protein-coding common_peak2_55_35_0.354719112776368_5.3472845578305_0.626414924887867-5 chrX 10718320 10719062 + 0.626414924887867 NA exon (NM_001166635, exon 2 of 2) exon (NM_001166635, exon 2 of 2) 1326 NM_001166635 68041 Mm.29429 NM_026524 ENSMUSG00000008035 Mid1ip1 3110038L01Rik|Mig12|S14R Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) protein-coding common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867-7 chr9 63959287 63960291 + 0.626414924887867 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 62270 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867-2 chr11 5863217 5863929 + 0.626414924887867 NA intron (NM_009636, intron 1 of 20) intron (NM_009636, intron 1 of 20) 1707 NM_001291857 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding common_peak1_55_35_0.354719112776368_5.3472845578305_0.626414924887867-4 chr13 43171128 43171877 + 0.626414924887867 NA promoter-TSS (NM_025935) promoter-TSS (NM_025935) -1 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_55_35_0.354719112776368_5.3472845578305_0.626414924887867-3 chr19 46328506 46328927 + 0.626414924887867 NA exon (NM_133694, exon 2 of 4) exon (NM_133694, exon 2 of 4) 532 NM_133694 68431 Mm.19973 NM_133694 ENSMUSG00000025226 Fbxl15 0710008C12Rik|Fbxo37 F-box and leucine-rich repeat protein 15 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-3 chr17 34898123 34898359 + 0.625923329873571 NA promoter-TSS (NM_001286573) promoter-TSS (NM_001286573) -251 NM_001286575 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-6 chr4 119232338 119232657 + 0.625923329873571 NA promoter-TSS (NM_001286148) promoter-TSS (NM_001286148) 227 NM_001012400 230696 Mm.473722 NM_001012400 ENSMUSG00000078584 AU022252 AI450326 expressed sequence AU022252 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571 chr11 84829320 84829533 + 0.625923329873571 NA promoter-TSS (NM_177564) promoter-TSS (NM_177564) 248 NR_046281 74995 Mm.84413 NR_046281 ENSMUSG00000086799 4930502E09Rik - RIKEN cDNA 4930502E09 gene ncRNA unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-2 chr1 74017711 74018235 + 0.625923329873571 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 106474 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-9 chr7 110109610 110109836 + 0.625923329873571 NA Intergenic Intergenic -12336 NM_001355058 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-7 chr5 145117051 145117385 + 0.625923329873571 NA intron (NM_023142, intron 1 of 9) intron (NM_023142, intron 1 of 9) 2962 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-17 chr5 5625876 5626145 + 0.625923329873571 NA exon (NM_172447, exon 7 of 23) exon (NM_172447, exon 7 of 23) 38222 NM_172447 207686 Mm.319007 NM_172447 ENSMUSG00000040473 Cfap69 4921525K03|A330021E22Rik|AI427898 cilia and flagella associated protein 69 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-12 chr3 53152187 53152507 + 0.625923329873571 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 110800 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-3 chr10 7210762 7211039 + 0.625923329873571 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 1337 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-10 chr6 137568671 137568914 + 0.625923329873571 NA intron (NM_001271588, intron 1 of 20) intron (NM_001271588, intron 1 of 20) 2217 NM_001271595 13860 Mm.235346 NM_007945 ENSMUSG00000015766 Eps8 AW261790 epidermal growth factor receptor pathway substrate 8 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-5 chr12 24565727 24566092 + 0.625923329873571 NA Intergenic Intergenic -6378 NM_001161406 195733 Mm.263068 NM_145890 ENSMUSG00000020656 Grhl1 LBP-32|MGR|Tcfcp2l2 grainyhead like transcription factor 1 protein-coding unique_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-2 chr6 17142731 17142990 + 0.625923329873571 NA intron (NR_153844, intron 1 of 2) intron (NR_153844, intron 1 of 2) 28973 NR_153844 232599 Mm.430719 NM_177689 Gm4876 B930018B01|EG232599 predicted gene 4876 ncRNA common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-17 chr8 31115029 31115319 + 0.625923329873571 NA intron (NM_175136, intron 1 of 5) intron (NM_175136, intron 1 of 5) 3328 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-14 chr3 58370099 58370626 + 0.625923329873571 NA Intergenic Intergenic -44358 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-4 chr11 103383286 103383581 + 0.625923329873571 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -19741 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-8 chr13 55023023 55023338 + 0.625923329873571 NA Intergenic Intergenic -1795 NM_001033245 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-2 chr12 102291277 102291771 + 0.625923329873571 NA intron (NM_001161365, intron 1 of 9) MLT1J|LTR|ERVL-MaLR 7883 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-7 chr6 17481694 17482133 + 0.625923329873571 NA intron (NM_008591, intron 1 of 21) A-rich|Low_complexity|Low_complexity 17956 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-10 chr7 106551635 106551940 + 0.625923329873571 NA Intergenic Intergenic 92858 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-18 chr6 29272296 29272520 + 0.625923329873571 NA promoter-TSS (NM_023516) promoter-TSS (NM_023516) -80 NM_001190461 69573 Mm.45161 NM_023516 ENSMUSG00000043421 Hilpda 2310016C08Rik|AW049004|Hig2 hypoxia inducible lipid droplet associated protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-7 chr13 3746826 3747200 + 0.625923329873571 NA Intergenic Intergenic 57305 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-8 chr7 25784649 25785149 + 0.625923329873571 NA intron (NM_009465, intron 4 of 19) intron (NM_009465, intron 4 of 19) 3834 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak1_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-2 chr4 58401788 58402026 + 0.625923329873571 NA Intergenic Intergenic 39191 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-5 chr11 65366354 65366764 + 0.625923329873571 NA Intergenic URR1B|DNA|hAT-Charlie -78726 NR_040280 327946 Mm.383301 NR_040280 ENSMUSG00000085162 Gm12295 A730013G04 predicted gene 12295 ncRNA common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-5 chr3 95817507 95817948 + 0.625923329873571 NA intron (NM_001081293, intron 1 of 10) intron (NM_001081293, intron 1 of 10) 1226 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-7 chr5 105781520 105781819 + 0.625923329873571 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 80859 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-3 chr1 93669454 93669871 + 0.625923329873571 NA Intergenic Intergenic -15913 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-8 chr7 16581039 16581268 + 0.625923329873571 NA intron (NM_172739, intron 1 of 6) intron (NM_172739, intron 1 of 6) -32671 NR_136928 102634559 Mm.421602 NR_136928 ENSMUSG00000100583 Gm29443 - predicted gene 29443 ncRNA unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-22 chr9 43226042 43226270 + 0.625923329873571 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 13660 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-11 chr7 112278303 112278648 + 0.625923329873571 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 52639 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571 chr12 105031826 105032177 + 0.625923329873571 NA promoter-TSS (NR_028576) promoter-TSS (NR_028576) 278 NR_003145 69434 Mm.380736 NR_003145 ENSMUSG00000113722 Snhg10 1700026B20Rik|AI642517 small nucleolar RNA host gene 10 ncRNA unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-19 chr6 120114578 120115161 + 0.625923329873571 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 21489 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-15 chr9 98601380 98601663 + 0.625923329873571 NA exon (NM_025485, exon 1 of 8) exon (NM_025485, exon 1 of 8) 158 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-10 chr7 140137561 140137796 + 0.625923329873571 NA exon (NM_199301, exon 1 of 11) exon (NM_199301, exon 1 of 11) 114 NM_199301 212508 Mm.296088 NM_199301 ENSMUSG00000039018 Mtg1 Gm169|Gtpbp7 mitochondrial ribosome-associated GTPase 1 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-5 chr2 26118272 26118509 + 0.625923329873571 NA intron (NM_026495, intron 1 of 5) intron (NM_026495, intron 1 of 5) 4421 NM_026495 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-5 chr2 21031192 21031469 + 0.625923329873571 NA Intergenic Intergenic 62456 NR_033225 433408 Mm.386941 NR_033225 Gm13375 - predicted gene 13375 ncRNA unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-9 chr7 27355575 27356029 + 0.625923329873571 NA TTS (NM_032610) TTS (NM_032610) 206 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-6 chr3 59140055 59140379 + 0.625923329873571 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) -7755 NM_001287120 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-14 chr6 70824184 70824411 + 0.625923329873571 NA Intergenic Intergenic -20218 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-16 chr4 141246247 141246483 + 0.625923329873571 NA exon (NM_172520, exon 3 of 17) exon (NM_172520, exon 3 of 17) 3481 NM_172520 213649 Mm.134460 NM_172520 ENSMUSG00000028919 Arhgef19 6030432F23|6430573B13Rik|WGEF Rho guanine nucleotide exchange factor (GEF) 19 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-2 chr1 172503583 172503945 + 0.625923329873571 NA intron (NM_178598, intron 1 of 4) intron (NM_178598, intron 1 of 4) 3518 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-2 chr15 81693740 81694012 + 0.625923329873571 NA exon (NM_001164320, exon 3 of 6) exon (NM_001164320, exon 3 of 6) 3411 NM_001164320 214685 Mm.393287 NM_001164320 ENSMUSG00000063765 Chadl AY100452|D930017K21Rik chondroadherin-like protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-13 chr2 168955978 168956281 + 0.625923329873571 NA promoter-TSS (NM_009564) promoter-TSS (NM_009564) -542 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-3 chr16 30600494 30600841 + 0.625923329873571 NA exon (NM_177632, exon 1 of 1) exon (NM_177632, exon 1 of 1) 944 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-16 chr7 109986689 109986895 + 0.625923329873571 NA promoter-TSS (NM_153525) promoter-TSS (NM_153525) -562 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-10 chr17 35704910 35705200 + 0.625923329873571 NA promoter-TSS (NM_007584) promoter-TSS (NM_007584) -456 NM_007584 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-4 chr7 97371703 97371966 + 0.625923329873571 NA intron (NM_199035, intron 1 of 12) intron (NM_199035, intron 1 of 12) 217 NM_199035 381903 Mm.279683 NM_199035 ENSMUSG00000035704 Alg8 AI447372|Gm1089 asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-7 chr12 73308153 73308449 + 0.625923329873571 NA intron (NM_001037717, intron 3 of 15) intron (NM_001037717, intron 3 of 15) 21453 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding unique_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571 chr2 60801489 60801884 + 0.625923329873571 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) -79083 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-3 chr14 118566711 118566955 + 0.625923329873571 NA intron (NM_001163676, intron 18 of 29) intron (NM_001163676, intron 18 of 29) 25639 NR_105815 102465208 NR_105815 ENSMUSG00000098433 Mir6391 Gm27914|mmu-mir-6391 microRNA 6391 ncRNA unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-13 chr8 46899535 46900114 + 0.625923329873571 NA Intergenic B3|SINE|B2 -87063 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-6 chr5 90339254 90339698 + 0.625923329873571 NA intron (NM_198010, intron 1 of 32) intron (NM_198010, intron 1 of 32) 26709 NM_030886 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-8 chr14 79390289 79390611 + 0.625923329873571 NA intron (NM_025832, intron 1 of 19) CpG 218 NM_025832 66897 Mm.24425 NM_025832 ENSMUSG00000022020 Naa16 1300019C06Rik|Narg1l N(alpha)-acetyltransferase 16, NatA auxiliary subunit protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-10 chr18 67370032 67370311 + 0.625923329873571 NA Intergenic Intergenic -20560 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding unique_peak1_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-2 chr15 10709486 10710015 + 0.625923329873571 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 3790 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-4 chr2 126948603 126948895 + 0.625923329873571 NA Intergenic Intergenic -15514 NM_023220 66552 Mm.269928 NM_023220 ENSMUSG00000027366 Sppl2a 2010106G01Rik|C130089K23Rik signal peptide peptidase like 2A protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-11 chr18 75909425 75909908 + 0.625923329873571 NA intron (NM_145356, intron 2 of 4) MTD|LTR|ERVL-MaLR 89488 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-4 chr19 3811206 3811427 + 0.625923329873571 NA intron (NM_001167885, intron 12 of 12) intron (NM_001167885, intron 12 of 12) -40457 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-16 chrX 104413255 104413662 + 0.625923329873571 NA intron (NM_009592, intron 1 of 15) intron (NM_009592, intron 1 of 15) 388 NM_009592 11306 Mm.426128 NM_009592 ENSMUSG00000031333 Abcb7 AA517758|AU019072|Abc7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 protein-coding unique_peak1_15_20_-0.662277378560965_4.06117873349828_0.625923329873571 chr13 110918700 110919083 + 0.625923329873571 NA Intergenic Intergenic -15045 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-13 chr3 98044526 98044894 + 0.625923329873571 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 31172 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-13 chr8 124960429 124960638 + 0.625923329873571 NA Intergenic Intergenic -11279 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-21 chr8 78656314 78656650 + 0.625923329873571 NA intron (NM_001009981, intron 5 of 10) PB1D10|SINE|Alu 147154 NM_001282108 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-4 chr10 116259147 116259532 + 0.625923329873571 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -42035 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-20 chr7 24464152 24464575 + 0.625923329873571 NA intron (NM_011113, intron 1 of 6) intron (NM_011113, intron 1 of 6) 1880 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-15 chr3 145701194 145701603 + 0.625923329873571 NA Intergenic (GAAAA)n|Simple_repeat|Simple_repeat -51413 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-14 chr9 75558060 75558473 + 0.625923329873571 NA intron (NM_001357828, intron 1 of 10) intron (NM_001357828, intron 1 of 10) 1391 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571 chr12 51692155 51692444 + 0.625923329873571 NA promoter-TSS (NM_052973) promoter-TSS (NM_052973) -385 NM_052973 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-12 chr2 21204582 21204923 + 0.625923329873571 NA promoter-TSS (NM_177588) promoter-TSS (NM_177588) 613 NM_027728 71233 Mm.27658 NM_027728 ENSMUSG00000026679 Enkur 4933434I06Rik|AU016229 enkurin, TRPC channel interacting protein protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-12 chr8 82377727 82378035 + 0.625923329873571 NA intron (NM_008357, intron 2 of 7) intron (NM_008357, intron 2 of 7) 24705 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-9 chr13 67609265 67609553 + 0.625923329873571 NA intron (NM_001163246, intron 1 of 3) intron (NM_001163246, intron 1 of 3) 298 NM_001163246 100416706 Mm.478045 NM_001163246 ENSMUSG00000058093 Zfp729b AA987127 zinc finger protein 729b protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571 chr1 79704246 79704489 + 0.625923329873571 NA 3' UTR (NM_001111279, exon 12 of 12) 3' UTR (NM_001111279, exon 12 of 12) -32395 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-18 chr9 104901513 104901727 + 0.625923329873571 NA intron (NM_028719, intron 5 of 15) intron (NM_028719, intron 5 of 15) -151648 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-8 chr6 57534920 57535229 + 0.625923329873571 NA intron (NM_175523, intron 1 of 6) intron (NM_175523, intron 1 of 6) 352 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-6 chr12 75551657 75552486 + 0.625923329873571 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 44129 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-3 chr7 19338363 19338695 + 0.625923329873571 NA Intergenic Intergenic -6542 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-6 chr11 96279572 96279793 + 0.625923329873571 NA Intergenic Intergenic -2223 NM_010461 15416 Mm.4822 NM_010461 ENSMUSG00000056648 Hoxb8 Hox-2.4 homeobox B8 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-15 chr7 68026795 68027094 + 0.625923329873571 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 74687 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-2 chr13 94135033 94135338 + 0.625923329873571 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 77389 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_15_20_-0.662277378560965_4.06117873349828_0.625923329873571 chr3 122512345 122512555 + 0.625923329873571 NA exon (NM_001355264, exon 5 of 10) exon (NM_001355264, exon 5 of 10) 28881 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-9 chr15 13192555 13192835 + 0.625923329873571 NA Intergenic Intergenic -19020 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-9 chr6 135251820 135252342 + 0.625923329873571 NA intron (NM_001080553, intron 1 of 5) intron (NM_001080553, intron 1 of 5) 2255 NM_010352 14840 Mm.272306 NM_010352 ENSMUSG00000030206 Gsg1 - germ cell associated 1 protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-23 chr9 72289982 72290338 + 0.625923329873571 NA intron (NM_146224, intron 1 of 21) A-rich|Low_complexity|Low_complexity 15272 NM_001311105 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding unique_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-12 chr8 11368317 11368740 + 0.625923329873571 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -55702 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571-11 chr2 75938472 75938668 + 0.625923329873571 NA promoter-TSS (NM_028235) promoter-TSS (NM_028235) -108 NM_028235 72421 Mm.275109 NM_028235 ENSMUSG00000075273 Ttc30b 2510042P03Rik|Tcc30b tetratricopeptide repeat domain 30B protein-coding unique_peak1_23_13_0.503520724387645_4.05911528425143_0.625923329873571 chr1 71891353 71891833 + 0.625923329873571 NA TTS (NR_027658) TTS (NR_027658) 3481 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-14 chr9 3335547 3335857 + 0.625923329873571 NA intron (NM_026303, intron 1 of 11) intron (NM_026303, intron 1 of 11) 471 NM_026303 67667 Mm.116968 NM_026303 ENSMUSG00000025899 Alkbh8 4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8 alkB homolog 8, tRNA methyltransferase protein-coding common_peak2_23_13_0.503520724387645_4.05911528425143_0.625923329873571-4 chr17 62883415 62883635 + 0.625923329873571 NA Intergenic Intergenic -2208 NM_010109 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak2_15_20_-0.662277378560965_4.06117873349828_0.625923329873571-11 chr7 67972075 67972381 + 0.625923329873571 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 19971 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_175_124_0.199281158788486_7.06542486405633_0.625431855728691 chr8 4252550 4254072 + 0.625431855728691 NA intron (NM_133968, intron 1 of 4) CpG 209 NM_133968 102209 Mm.28452 NM_133968 ENSMUSG00000011837 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 protein-coding common_peak2_151_144_-0.224855594616276_7.0674812927068_0.625431855728691 chr7 67371681 67373610 + 0.625431855728691 NA intron (NM_001357324, intron 1 of 11) CpG 213 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak2_82_83_-0.303993801887843_6.24032052183484_0.625128030894799-3 chrX 73465281 73466780 + 0.625128030894799 NA Intergenic Intergenic -7001 NM_207104 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding common_peak2_101_68_0.275087023212492_6.24606796838442_0.625128030894799 chr18 77773704 77774676 + 0.625128030894799 NA promoter-TSS (NM_001357532) promoter-TSS (NM_001357532) -305 NM_001357531 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak1_100_68_0.260973442479244_6.23901117801779_0.625128030894799 chr4 33247894 33248498 + 0.625128030894799 NA exon (NM_001033225, exon 1 of 2) exon (NM_001033225, exon 1 of 2) 591 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak2_101_68_0.275087023212492_6.24606796838442_0.625128030894799-2 chr2 71211790 71212463 + 0.625128030894799 NA intron (NM_001347173, intron 1 of 17) CpG 180 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding common_peak2_82_83_-0.303993801887843_6.24032052183484_0.625128030894799-2 chr7 101896079 101897369 + 0.625128030894799 NA intron (NM_001291349, intron 1 of 4) intron (NM_001291349, intron 1 of 4) 393 NM_001291349 75430 Mm.284491 NM_027532 ENSMUSG00000030649 Anapc15 3200002M19Rik|6330414C15Rik|APC15 anaphase prompoting complex C subunit 15 protein-coding common_peak2_82_83_-0.303993801887843_6.24032052183484_0.625128030894799 chr4 88933424 88934974 + 0.625128030894799 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 7843 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak1_94_94_-0.288090234605167_6.42581049102836_0.624693629999522 chr2 94437270 94438165 + 0.624693629999522 NA intron (NM_007466, intron 1 of 13) CpG 469 NM_007466 11800 Mm.181824 NM_007466 ENSMUSG00000027193 Api5 AAC-11|AI196452|API-5 apoptosis inhibitor 5 protein-coding common_peak1_94_94_-0.288090234605167_6.42581049102836_0.624693629999522-2 chr7 101905880 101906725 + 0.624693629999522 NA promoter-TSS (NM_001081679) promoter-TSS (NM_001081679) 57 NM_001081679 791260 Mm.475469 NM_001081679 ENSMUSG00000078630 Tomt Comt2|F930017I19Rik transmembrane O-methyltransferase protein-coding common_peak1_114_78_0.251674472799785_6.429617984577_0.624693629999522 chr18 21002009 21002881 + 0.624693629999522 NA intron (NM_207623, intron 1 of 6) CpG 488 NM_001303011 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak1_114_78_0.251674472799785_6.429617984577_0.624693629999522-2 chr5 21498945 21500096 + 0.624693629999522 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -44007 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak2_114_78_0.251674472799785_6.429617984577_0.624693629999522 chr2 18391926 18392859 + 0.624693629999522 NA exon (NM_007869, exon 1 of 12) exon (NM_007869, exon 1 of 12) 438 NM_001190817 13418 Mm.246674 NM_007869 ENSMUSG00000026740 Dnajc1 4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding common_peak1_365_268_0.142419349827218_8.14267203747023_0.624394774758056 chr15 81585359 81587012 + 0.624394774758056 NA promoter-TSS (NM_177821) promoter-TSS (NM_177821) -29 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak2_121_118_-0.254716673578312_6.76745942651879_0.624130306730864 chr7 90128662 90129967 + 0.624130306730864 NA promoter-TSS (NM_146194) promoter-TSS (NM_146194) 160 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_121_118_-0.254716673578312_6.76745942651879_0.624130306730864-2 chr7 127344919 127346072 + 0.624130306730864 NA promoter-TSS (NM_146202) promoter-TSS (NM_146202) -181 NM_146202 233890 Mm.23031 NM_146202 ENSMUSG00000047371 Zfp768 BC026432|Znf768 zinc finger protein 768 protein-coding common_peak1_143_100_0.219389806774422_6.76790638613901_0.624130306730864 chr1 184077137 184078492 + 0.624130306730864 NA Intergenic Intergenic 43433 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_71_73_-0.32479709652949_6.04705481736421_0.624067979817126 chr1 58715725 58716796 + 0.624067979817126 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) 2974 NM_001355056 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_71_73_-0.32479709652949_6.04705481736421_0.624067979817126-4 chr3 37874592 37875228 + 0.624067979817126 NA Intergenic Intergenic -23903 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_71_73_-0.32479709652949_6.04705481736421_0.624067979817126-3 chr11 103101025 103102061 + 0.624067979817126 NA promoter-TSS (NM_025988) promoter-TSS (NM_025988) 115 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak2_71_73_-0.32479709652949_6.04705481736421_0.624067979817126-2 chr10 126978823 126979654 + 0.624067979817126 NA exon (NM_001113470, exon 1 of 8) exon (NM_001113470, exon 1 of 8) 521 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding common_peak1_88_59_0.281416630791409_6.04759891100422_0.624067979817114-2 chr9 101250826 101251707 + 0.624067979817114 NA intron (NM_001161362, intron 1 of 13) CpG 566 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding common_peak1_88_59_0.281416630791409_6.04759891100422_0.624067979817114 chr12 31350415 31351406 + 0.624067979817114 NA intron (NM_007861, intron 1 of 13) CpG 561 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding common_peak2_88_59_0.281416630791409_6.04759891100422_0.624067979817114 chr10 81137742 81138376 + 0.624067979817114 NA intron (NM_010731, intron 1 of 2) CpG 1788 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_136_131_-0.238178545242674_6.92530484673712_0.623952727586918 chr6 108703603 108705927 + 0.623952727586918 NA Intergenic Intergenic -43831 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_194_138_0.192979643566451_7.21543089450673_0.623729950976745 chr11 118361541 118363361 + 0.623729950976745 NA Intergenic Intergenic -7040 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak2_185_174_-0.206980949625337_7.34772063701966_0.623665528751526 chr2 117743297 117745757 + 0.623665528751526 NA Intergenic Intergenic 68275 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_108_106_-0.2627721012727_6.6100809357648_0.623262243912118 chr5 31613949 31615491 + 0.623262243912118 NA intron (NM_025796, intron 2 of 3) intron (NM_025796, intron 2 of 3) 769 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_177_125_0.203972323326767_7.0792660851633_0.623024452090679 chr15 8442996 8444442 + 0.623024452090679 NA intron (NM_201232, intron 1 of 45) CpG 744 NM_027707 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak2_204_190_-0.193867341254676_7.48049515740841_0.623020158336311 chr8 122144321 122146154 + 0.623020158336311 NA Intergenic Intergenic -136904 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-2 chr12 8208101 8208466 + 0.622271369641148 NA intron (NM_001167767, intron 1 of 5) CpG 156 NM_001167767 68832 Mm.25608 NM_172401 ENSMUSG00000037669 Ldah 1110057K04Rik|mLDAH lipid droplet associated hydrolase protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-10 chr9 63704022 63704581 + 0.622271369641148 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 53693 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-9 chr7 16221674 16221955 + 0.622271369641148 NA 5' UTR (NM_001285931, exon 1 of 17) 5' UTR (NM_001285931, exon 1 of 17) 179 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_38_23_0.421411275961413_4.79566813870186_0.622271369641148-4 chr17 74294117 74294489 + 0.622271369641148 NA intron (NM_133771, intron 1 of 8) intron (NM_133771, intron 1 of 8) 560 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-9 chr19 44283842 44284180 + 0.622271369641148 NA Intergenic Intergenic -9665 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-5 chr13 69593140 69593457 + 0.622271369641148 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 18165 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-6 chr11 117317202 117317659 + 0.622271369641148 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -14285 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-6 chr19 47244070 47244710 + 0.622271369641148 NA intron (NM_001163480, intron 3 of 5) intron (NM_001163480, intron 3 of 5) 15547 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-3 chr11 62221594 62222038 + 0.622271369641148 NA 3' UTR (NM_001281818, exon 15 of 15) 3' UTR (NM_001281818, exon 15 of 15) -27168 NM_007413 11541 Mm.40740 NM_007413 ENSMUSG00000018500 Adora2b A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384 adenosine A2b receptor protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-2 chr1 153735586 153736183 + 0.622271369641148 NA intron (NR_046171, intron 1 of 2) intron (NR_046171, intron 1 of 2) 1945 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148 chr1 193129777 193130145 + 0.622271369641148 NA intron (NM_145415, intron 1 of 11) CpG 290 NM_145415 215193 Mm.173758 NM_145415 ENSMUSG00000016181 Diexf AA408296|AW045375|Def digestive organ expansion factor homolog (zebrafish) protein-coding unique_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-3 chr14 34296049 34297064 + 0.622271369641148 NA intron (NR_153399, intron 2 of 11) intron (NR_153399, intron 2 of 11) 13961 NR_153399 75698 Mm.45406 NM_029389 ENSMUSG00000041471 Fam35a 3110001K24Rik family with sequence similarity 35, member A protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-7 chr16 13437566 13437924 + 0.622271369641148 NA Intergenic Intergenic -11778 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-8 chr4 134758228 134758962 + 0.622271369641148 NA intron (NM_145554, intron 2 of 8) intron (NM_145554, intron 2 of 8) 9409 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-4 chr12 73382958 73383200 + 0.622271369641148 NA intron (NR_046013, intron 2 of 3) intron (NR_046013, intron 2 of 3) 26484 NR_046013 380765 Mm.490476 NR_046013 ENSMUSG00000056359 D830013O20Rik Gm891 RIKEN cDNA D830013O20 gene ncRNA common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-8 chr18 69343778 69344319 + 0.622271369641148 NA promoter-TSS (NM_013685) promoter-TSS (NM_013685) -444 NM_013685 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-9 chr6 108118451 108118801 + 0.622271369641148 NA exon (NM_145937, exon 8 of 9) exon (NM_145937, exon 8 of 9) 53581 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-12 chr5 88675750 88676149 + 0.622271369641148 NA promoter-TSS (NM_001098476) promoter-TSS (NM_001098476) 222 NM_178700 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-5 chr11 76374344 76375063 + 0.622271369641148 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 24438 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-5 chr14 48201956 48202394 + 0.622271369641148 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 3459 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_38_23_0.421411275961413_4.79566813870186_0.622271369641148-3 chr16 90829933 90830492 + 0.622271369641148 NA promoter-TSS (NR_133572) promoter-TSS (NR_133572) -647 NR_133572 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-11 chr4 32570700 32571088 + 0.622271369641148 NA intron (NR_026843, intron 1 of 4) intron (NR_026843, intron 1 of 4) 768 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak2_38_23_0.421411275961413_4.79566813870186_0.622271369641148 chr11 94473279 94473751 + 0.622271369641148 NA exon (NM_001112813, exon 1 of 35) exon (NM_001112813, exon 1 of 35) 683 NM_001177888 12291 Mm.29585 NM_009783 ENSMUSG00000020866 Cacna1g Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123 calcium channel, voltage-dependent, T type, alpha 1G subunit protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-10 chr3 88511843 88512298 + 0.622271369641148 NA Intergenic Intergenic -8718 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-11 chr8 92357905 92358366 + 0.622271369641148 NA 5' UTR (NM_018826, exon 1 of 3) 5' UTR (NM_018826, exon 1 of 3) 339 NM_018826 54352 Mm.101153 NM_018826 ENSMUSG00000031737 Irx5 - Iroquois homeobox 5 protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-2 chr11 59460044 59460654 + 0.622271369641148 NA TTS (NM_178417) TTS (NM_178417) 10304 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-6 chr15 74675819 74676244 + 0.622271369641148 NA Intergenic Intergenic -3461 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-14 chr6 127972055 127972637 + 0.622271369641148 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 84724 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-2 chr10 19594201 19594737 + 0.622271369641148 NA intron (NM_010511, intron 1 of 6) intron (NM_010511, intron 1 of 6) 2520 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-7 chr3 133543750 133544264 + 0.622271369641148 NA intron (NM_001040400, intron 1 of 10) intron (NM_001040400, intron 1 of 10) 383 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding common_peak2_38_23_0.421411275961413_4.79566813870186_0.622271369641148-2 chr13 55482794 55483244 + 0.622271369641148 NA intron (NM_001177371, intron 2 of 14) intron (NM_001177371, intron 2 of 14) 5057 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding unique_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148 chr1 186448987 186449402 + 0.622271369641148 NA Intergenic Intergenic 109487 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-7 chr18 67610187 67611025 + 0.622271369641148 NA Intergenic CpG 30749 NM_001357523 225659 Mm.111928 NM_001081073 ENSMUSG00000073542 Cep76 6230425F05Rik|9630013E05 centrosomal protein 76 protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-8 chr18 61108569 61109138 + 0.622271369641148 NA intron (NM_001037859, intron 2 of 21) intron (NM_001037859, intron 2 of 21) 3281 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-13 chr6 54278848 54279217 + 0.622271369641148 NA intron (NM_001163640, intron 7 of 12) intron (NM_001163640, intron 7 of 12) 6210 NM_023543 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_38_23_0.421411275961413_4.79566813870186_0.622271369641148-5 chr7 49474879 49475348 + 0.622271369641148 NA intron (NM_175272, intron 10 of 37) intron (NM_175272, intron 10 of 37) 161722 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-4 chr11 65366520 65366974 + 0.622271369641148 NA Intergenic Intergenic -78914 NR_040280 327946 Mm.383301 NR_040280 ENSMUSG00000085162 Gm12295 A730013G04 predicted gene 12295 ncRNA common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-3 chr12 33146862 33147368 + 0.622271369641148 NA promoter-TSS (NM_028139) promoter-TSS (NM_028139) 471 NR_015602 320046 Mm.208337 NR_015602 ENSMUSG00000052125 F730043M19Rik - RIKEN cDNA F730043M19 gene ncRNA common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148-3 chr1 161248401 161248747 + 0.622271369641148 NA intron (NM_007453, intron 1 of 4) intron (NM_007453, intron 1 of 4) 2636 NM_007453 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-10 chr7 35317980 35318362 + 0.622271369641148 NA intron (NM_026181, intron 1 of 19) CpG 269 NM_026181 67471 Mm.358705 NM_026181 ENSMUSG00000063808 Gpatch1 1300003A17Rik|ECGP|Gpatc1 G patch domain containing 1 protein-coding unique_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-4 chr19 17264693 17265059 + 0.622271369641148 NA Intergenic Intergenic 74629 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148 chr1 161034389 161034792 + 0.622271369641148 NA promoter-TSS (NR_153814) promoter-TSS (NR_153814) 259 NM_001356489 240869 Mm.296127 NM_173424 ENSMUSG00000043467 Zbtb37 D430004I08Rik zinc finger and BTB domain containing 37 protein-coding common_peak1_27_32_-0.512695025566528_4.78804660657519_0.622271369641148 chr1 66837712 66838030 + 0.622271369641148 NA intron (NM_007381, intron 9 of 10) intron (NM_007381, intron 9 of 10) -20276 NM_001122738 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_38_23_0.421411275961413_4.79566813870186_0.622271369641148-4 chr13 60046881 60047345 + 0.622271369641148 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 17402 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_275_199_0.165722755102496_7.72671756732597_0.622061074269178 chr8 20550218 20551059 + 0.622061074269178 NA Intergenic CpG -64289 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak1_195_139_0.189965167274599_7.22426560058227_0.621567850456929 chr3 152395474 152397399 + 0.621567850456929 NA promoter-TSS (NM_001287139) promoter-TSS (NM_001287139) -248 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-6 chr19 44750396 44750846 + 0.621525249893804 NA Intergenic CpG -6773 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_46_29_0.366770707693536_5.09027594945529_0.621525249893804-4 chr4 100248400 100249194 + 0.621525249893804 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 153006 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-8 chr9 24773596 24774254 + 0.621525249893804 NA 5' UTR (NM_020496, exon 1 of 7) 5' UTR (NM_020496, exon 1 of 7) 378 NM_020496 57246 Mm.31452 NM_020496 ENSMUSG00000031965 Tbx20 9430010M06Rik|AL022859|Tbx12 T-box 20 protein-coding common_peak1_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-2 chr11 117949417 117949762 + 0.621525249893804 NA Intergenic CpG 19777 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_46_29_0.366770707693536_5.09027594945529_0.621525249893804-3 chr4 32409662 32410226 + 0.621525249893804 NA Intergenic Intergenic -7491 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-2 chr10 77515408 77515686 + 0.621525249893804 NA intron (NM_133998, intron 1 of 5) intron (NM_133998, intron 1 of 5) 266 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak1_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-6 chr7 30094831 30095372 + 0.621525249893804 NA promoter-TSS (NM_011981) promoter-TSS (NM_011981) 25 NM_011981 26466 Mm.195092 NM_011981 ENSMUSG00000049421 Zfp260 AI480997|Ozrf1|PEX1|Zfp63|Znf260 zinc finger protein 260 protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-4 chr17 24470535 24471046 + 0.621525249893804 NA exon (NM_025954, exon 1 of 2) exon (NM_025954, exon 1 of 2) 317 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding common_peak1_46_29_0.366770707693536_5.09027594945529_0.621525249893804-2 chr15 77077587 77078439 + 0.621525249893804 NA TTS (NM_001110830) TTS (NM_001110830) -6385 NR_108037 74303 Mm.444304 NR_108037 ENSMUSG00000097267 1700109K24Rik 4933425G21Rik RIKEN cDNA 1700109K24 gene ncRNA common_peak1_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-3 chr17 65614216 65614698 + 0.621525249893804 NA promoter-TSS (NM_013933) promoter-TSS (NM_013933) -902 NM_013933 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804 chr10 81182890 81183320 + 0.621525249893804 NA promoter-TSS (NM_007828) promoter-TSS (NM_007828) 98 NM_001190474 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-7 chr17 84600515 84601189 + 0.621525249893804 NA intron (NM_001357987, intron 23 of 28) intron (NM_001357987, intron 23 of 28) -25647 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-2 chr11 93994769 93995029 + 0.621525249893804 NA Intergenic Intergenic -1192 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_46_29_0.366770707693536_5.09027594945529_0.621525249893804 chr12 65036395 65036789 + 0.621525249893804 NA intron (NM_177806, intron 1 of 13) CpG 258 NM_177806 328110 Mm.283339 NM_177806 ENSMUSG00000035597 Prpf39 Srcs1 pre-mRNA processing factor 39 protein-coding common_peak1_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-4 chr2 148186157 148186825 + 0.621525249893804 NA Intergenic Intergenic -139522 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-4 chr11 97436191 97436685 + 0.621525249893804 NA Intergenic Intergenic -13722 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804 chr10 71126708 71127349 + 0.621525249893804 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 32662 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-5 chr6 81586934 81587460 + 0.621525249893804 NA Intergenic Intergenic 308466 NR_106091 102465711 NR_106091 ENSMUSG00000106154 Mir7232 mmu-mir-7232 microRNA 7232 ncRNA common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-3 chr11 72469928 72470503 + 0.621525249893804 NA intron (NM_153060, intron 2 of 12) intron (NM_153060, intron 2 of 12) 4812 NM_001276383 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-7 chr5 139011108 139011401 + 0.621525249893804 NA Intergenic Intergenic -16301 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-5 chr16 18249187 18249728 + 0.621525249893804 NA promoter-TSS (NM_011239) promoter-TSS (NM_011239) 574 NM_001081000 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-3 chr12 65036415 65036769 + 0.621525249893804 NA intron (NM_177806, intron 1 of 13) CpG 258 NM_177806 328110 Mm.283339 NM_177806 ENSMUSG00000035597 Prpf39 Srcs1 pre-mRNA processing factor 39 protein-coding common_peak2_34_39_-0.470572102341559_5.08664204371658_0.621525249893804-6 chr17 79350458 79351027 + 0.621525249893804 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 4349 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_34_39_-0.470572102341559_5.08664204371658_0.621525249893804 chr1 36307815 36308260 + 0.621525249893804 NA intron (NM_001290727, intron 1 of 5) CpG 304 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-8 chr7 3617394 3617778 + 0.621525249893804 NA intron (NM_025348, intron 1 of 3) intron (NM_025348, intron 1 of 3) 213 NM_025348 66091 Mm.17851 NM_025348 ENSMUSG00000035674 Ndufa3 1010001M12Rik|1700022J01Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 protein-coding common_peak2_46_29_0.366770707693536_5.09027594945529_0.621525249893804-5 chr19 5817635 5817987 + 0.621525249893804 NA Intergenic Intergenic -15139 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_137_132_-0.238648511050725_6.93595817997583_0.621311296827447-2 chr5 135934080 135935634 + 0.621311296827447 NA promoter-TSS (NM_018871) promoter-TSS (NM_018871) -216 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak2_137_132_-0.238648511050725_6.93595817997583_0.621311296827447 chr2 164433318 164435346 + 0.621311296827447 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 8856 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_137_132_-0.238648511050725_6.93595817997583_0.621311296827447 chr17 65612371 65613505 + 0.621311296827447 NA intron (NM_001355402, intron 1 of 6) CpG 617 NM_001355402 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak1_137_132_-0.238648511050725_6.93595817997583_0.621311296827447-2 chr8 10921461 10922972 + 0.621311296827447 NA Intergenic Intergenic 6241 NR_030715 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA common_peak1_234_168_0.17832880662726_7.49004383959581_0.621223873677679 chr7 127478165 127480152 + 0.621223873677679 NA Intergenic CpG -6063 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding common_peak2_145_101_0.224935114021187_6.78489289898209_0.62118641861253 chr3 57845885 57847421 + 0.62118641861253 NA intron (NM_019410, intron 1 of 2) intron (NM_019410, intron 1 of 2) 1104 NM_019410 18645 Mm.271744 NM_019410 ENSMUSG00000027805 Pfn2 Pfn profilin 2 protein-coding common_peak2_321_234_0.153885445658897_7.95345966939445_0.620987426483021 chr15 80080464 80083251 + 0.620987426483021 NA intron (NM_013762, intron 2 of 9) intron (NM_013762, intron 2 of 9) 1049 NR_028281 100302600 NR_028281 Snord43 MBII-47 small nucleolar RNA, C/D box 43 snoRNA common_peak2_96_95_-0.273351946310078_6.44828652756612_0.62096275440975 chr11 86623059 86624340 + 0.62096275440975 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -39541 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_95_95_-0.288196813422394_6.44086409400996_0.62096275440975 chr15 74672855 74674120 + 0.62096275440975 NA promoter-TSS (NM_001276684) promoter-TSS (NM_001276684) -917 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak1_115_79_0.245929946916659_6.44489306834569_0.62096275440975 chr5 121190590 121191334 + 0.62096275440975 NA intron (NM_011202, intron 1 of 15) CpG 435 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak1_96_95_-0.273351946310078_6.44828652756612_0.62096275440975-2 chr18 67979643 67980623 + 0.62096275440975 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 46960 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_96_95_-0.273351946310078_6.44828652756612_0.62096275440975 chr11 51263144 51264049 + 0.62096275440975 NA promoter-TSS (NM_001358279) promoter-TSS (NM_001358279) 66 NM_001358281 193286 Mm.80975 NM_177567 ENSMUSG00000045942 BC049762 4930503F14 cDNA sequence BC049762 protein-coding common_peak1_51_55_-0.388871727175735_5.61291905846974_0.620905664975282 chr2 155473093 155473778 + 0.620905664975282 NA Intergenic C-rich|Low_complexity|Low_complexity -32652 NM_019825 56406 Mm.27592 NM_019825 ENSMUSG00000038369 Ncoa6 AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181 nuclear receptor coactivator 6 protein-coding common_peak2_51_55_-0.388871727175735_5.61291905846974_0.620905664975282 chr6 91561995 91562862 + 0.620905664975282 NA Intergenic IMPB_01|Satellite|Satellite 46393 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_66_43_0.32212139900309_5.62049231813884_0.62090566497527-3 chr8 121977774 121978808 + 0.62090566497527 NA TTS (NR_106096) TTS (NR_106096) 267 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak1_66_43_0.32212139900309_5.62049231813884_0.62090566497527-3 chr7 128739688 128740485 + 0.62090566497527 NA intron (NM_145955, intron 1 of 15) CpG 343 NM_145955 210711 Mm.58882 NM_145955 ENSMUSG00000048170 Mcmbp 1110007A13Rik|AU017382|BC025641|MCM-BP minichromosome maintenance complex binding protein protein-coding common_peak2_66_43_0.32212139900309_5.62049231813884_0.62090566497527-2 chr5 21500573 21501398 + 0.62090566497527 NA intron (NM_001199632, intron 17 of 20) intron (NM_001199632, intron 17 of 20) -42542 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_66_43_0.32212139900309_5.62049231813884_0.62090566497527-2 chr4 64076599 64077259 + 0.62090566497527 NA Intergenic Intergenic -29914 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_66_43_0.32212139900309_5.62049231813884_0.62090566497527 chr18 75497656 75498584 + 0.62090566497527 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -16525 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_66_43_0.32212139900309_5.62049231813884_0.62090566497527 chr19 5568106 5568918 + 0.62090566497527 NA exon (NM_001033448, exon 1 of 2) exon (NM_001033448, exon 1 of 2) 488 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962|beta-5 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_83_84_-0.303911219691566_6.25743532629192_0.620877707229174-2 chr8 33731957 33732773 + 0.620877707229174 NA promoter-TSS (NM_001167922) promoter-TSS (NM_001167922) 26 NM_001167922 68153 Mm.286104 NM_026584 ENSMUSG00000031585 Gtf2e2 34kDa|AI462509|C330006J08Rik general transcription factor II E, polypeptide 2 (beta subunit) protein-coding common_peak1_83_84_-0.303911219691566_6.25743532629192_0.620877707229174 chr19 9079495 9080346 + 0.620877707229174 NA Intergenic Intergenic 8036 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_102_69_0.268304348113261_6.2634351910016_0.620877707229174 chr3 104511067 104511878 + 0.620877707229174 NA exon (NM_001310698, exon 1 of 18) exon (NM_001310698, exon 1 of 18) 446 NM_001025067 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak1_102_69_0.268304348113261_6.2634351910016_0.620877707229174 chr11 120548894 120550151 + 0.620877707229174 NA TTS (NM_026814) TTS (NM_026814) 205 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Mcrip1 Fam195b MAPK regulated corepressor interacting protein 1 protein-coding common_peak2_83_84_-0.303911219691566_6.25743532629192_0.620877707229174 chr2 26139482 26140498 + 0.620877707229174 NA promoter-TSS (NM_001256522) promoter-TSS (NM_001256522) -447 NM_001256522 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak2_102_69_0.268304348113261_6.2634351910016_0.620877707229174-2 chr8 86882684 86883359 + 0.620877707229174 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 2237 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_61_64_-0.351918273475673_5.84640867629062_0.620825172320003-4 chr6 56796892 56797561 + 0.620825172320003 NA promoter-TSS (NM_001362209) promoter-TSS (NM_001362209) -13 NM_001362209 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_61_64_-0.351918273475673_5.84640867629062_0.620825172320003-3 chr19 8702705 8703404 + 0.620825172320003 NA Intergenic Intergenic 10843 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_61_64_-0.351918273475673_5.84640867629062_0.620825172320003 chr13 103333889 103334872 + 0.620825172320003 NA 5' UTR (NM_175171, exon 1 of 29) 5' UTR (NM_175171, exon 1 of 29) 112 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak1_61_64_-0.351918273475673_5.84640867629062_0.620825172320003-3 chr19 5798754 5799716 + 0.620825172320003 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) -3254 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA common_peak2_61_64_-0.351918273475673_5.84640867629062_0.620825172320003-2 chr16 96082790 96083587 + 0.620825172320003 NA promoter-TSS (NM_176928) promoter-TSS (NM_176928) -760 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak1_61_64_-0.351918273475673_5.84640867629062_0.620825172320003-2 chr12 111038294 111039107 + 0.620825172320003 NA Intergenic CpG -1098 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak1_61_64_-0.351918273475673_5.84640867629062_0.620825172320003 chr11 69259394 69260107 + 0.620825172320003 NA Intergenic Intergenic -22728 NM_008192 14919 Mm.291816 NM_008192 ENSMUSG00000020890 Gucy2e GC-E|GC1|ROS-GC1 guanylate cyclase 2e protein-coding common_peak1_77_51_0.298879078968232_5.84987925762521_0.62082517231999-2 chr12 112591926 112593274 + 0.62082517231999 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 3816 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_77_51_0.298879078968232_5.84987925762521_0.62082517231999 chr11 83878011 83878586 + 0.62082517231999 NA intron (NM_009330, intron 4 of 8) intron (NM_009330, intron 4 of 8) 25338 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_77_51_0.298879078968232_5.84987925762521_0.62082517231999-3 chr13 49316811 49317447 + 0.62082517231999 NA Intergenic Intergenic -7921 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_382_342_-0.143144416556476_8.35049255789458_0.620719050165274 chrX 96128997 96133823 + 0.620719050165274 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 35365 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_225_208_-0.184091409993876_7.61531342708394_0.620303129934616 chr11 72501748 72503566 + 0.620303129934616 NA intron (NM_029932, intron 9 of 11) intron (NM_029932, intron 9 of 11) -12737 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_311_281_-0.154342514435957_8.06238009518082_0.619984177790048 chr2 60697538 60700110 + 0.619984177790048 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 23779 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_130_90_0.234267668243694_6.62492847432054_0.619982649491058 chr8 119708389 119709138 + 0.619982649491058 NA intron (NM_026922, intron 1 of 26) intron (NM_026922, intron 1 of 26) 8754 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak2_109_107_-0.263110180385774_6.62333241197058_0.619982649491058 chr3 27652005 27652747 + 0.619982649491058 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 58076 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_215_154_0.182312486479433_7.36728064851395_0.619748949180652 chr3 142393815 142395594 + 0.619748949180652 NA intron (NM_001190854, intron 1 of 12) intron (NM_001190854, intron 1 of 12) 992 NM_001190853 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak2_235_169_0.175900190038489_7.49734103115695_0.61944753321095 chr19 38022282 38023808 + 0.61944753321095 NA intron (NM_001302140, intron 2 of 53) intron (NM_001302140, intron 2 of 53) 20532 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_171_161_-0.20771743182168_7.23599128697378_0.619434552856677-2 chr5 77265548 77267167 + 0.619434552856677 NA intron (NM_011263, intron 1 of 3) CpG 863 NM_011263 19712 Mm.28840 NM_011263 ENSMUSG00000029249 Rest 2610008J04Rik|AA407358|NRSF|REST4 RE1-silencing transcription factor protein-coding common_peak2_171_161_-0.20771743182168_7.23599128697378_0.619434552856677 chr16 91646634 91648734 + 0.619434552856677 NA promoter-TSS (NM_178880) promoter-TSS (NM_178880) -140 NM_019973 20658 Mm.46401 NM_019973 ENSMUSG00000022961 Son 2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp Son DNA binding protein protein-coding common_peak1_171_161_-0.20771743182168_7.23599128697378_0.619434552856677 chr14 7818103 7819835 + 0.619434552856677 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 1012 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_89_60_0.273575830290453_6.06752525270811_0.619228716864132 chr2 73528605 73529894 + 0.619228716864132 NA intron (NM_153138, intron 1 of 7) CpG 238 NM_153138 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_89_60_0.273575830290453_6.06752525270811_0.619228716864132-2 chr12 28635222 28635805 + 0.619228716864132 NA intron (NM_011300, intron 2 of 6) CpG-3104 440 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding common_peak1_89_60_0.273575830290453_6.06752525270811_0.619228716864132-2 chr5 5683616 5684971 + 0.619228716864132 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 9796 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak2_89_60_0.273575830290453_6.06752525270811_0.619228716864132 chr10 111506598 111507322 + 0.619228716864132 NA exon (NM_009344, exon 1 of 2) exon (NM_009344, exon 1 of 2) 674 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_89_60_0.273575830290453_6.06752525270811_0.619228716864132-3 chr8 11258157 11259004 + 0.619228716864132 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -54225 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_89_60_0.273575830290453_6.06752525270811_0.619228716864132-3 chr6 58846851 58847746 + 0.619228716864132 NA intron (NM_001361966, intron 3 of 25) intron (NM_001361966, intron 3 of 25) 13598 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak2_72_74_-0.324403254929954_6.0666170630309_0.619228716864119-2 chr7 16098674 16099524 + 0.619228716864119 NA intron (NM_025898, intron 1 of 10) intron (NM_025898, intron 1 of 10) 519 NM_025898 108124 Mm.104540 NM_025898 ENSMUSG00000006024 Napa 1500039N14Rik|AW209189|RA81|SNAP-alpha|SNAPA|SNARE|a-SNAP|hyh N-ethylmaleimide sensitive fusion protein attachment protein alpha protein-coding common_peak2_72_74_-0.324403254929954_6.0666170630309_0.619228716864119 chr15 74679378 74680083 + 0.619228716864119 NA Intergenic Intergenic -7160 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak1_72_74_-0.324403254929954_6.0666170630309_0.619228716864119 chr16 33056279 33056800 + 0.619228716864119 NA promoter-TSS (NM_021338) promoter-TSS (NM_021338) 25 NM_021338 57808 Mm.19355 NM_021338 ENSMUSG00000060636 Rpl35a 2810431L15Rik|Rpl35 ribosomal protein L35A protein-coding common_peak2_371_273_0.139143099673221_8.16760363279714_0.618766221101502 chr15 81585371 81587130 + 0.618766221101502 NA promoter-TSS (NM_177821) promoter-TSS (NM_177821) 36 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak1_162_114_0.209652938780049_6.9503165203344_0.618712770510189 chr7 128532412 128533972 + 0.618712770510189 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 9609 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak1_226_209_-0.184653207571277_7.62191891388048_0.618680439764194 chr11 117779231 117781600 + 0.618680439764194 NA promoter-TSS (NR_154387) promoter-TSS (NR_154387) 277 NM_145439 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692 chr1 124487400 124487674 + 0.618644178587692 NA Intergenic Intergenic -441978 NM_199021 269109 Mm.417716 NM_199021 ENSMUSG00000036815 Dpp10 6430601K09Rik|DPP X|Dprp3 dipeptidylpeptidase 10 protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-4 chr16 8666934 8667190 + 0.618644178587692 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 5091 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-6 chr5 107868796 107869100 + 0.618644178587692 NA intron (NM_007964, intron 1 of 17) CpG 6159 NM_007964 14020 Mm.35796 NM_007964 ENSMUSG00000011831 Evi5 NB4S ecotropic viral integration site 5 protein-coding unique_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692 chr10 128490693 128491390 + 0.618644178587692 NA TTS (NM_001114096) TTS (NM_001114096) 1968 NM_001317220 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding unique_peak1_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-2 chr15 97755909 97756301 + 0.618644178587692 NA intron (NM_001177810, intron 16 of 27) intron (NM_001177810, intron 16 of 27) 11561 NM_001177810 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-7 chr5 115124761 115125312 + 0.618644178587692 NA 3' UTR (NM_175352, exon 5 of 5) 3' UTR (NM_175352, exon 5 of 5) -5690 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-8 chr6 83101414 83101855 + 0.618644178587692 NA 5' UTR (NM_001081266, exon 1 of 9) 5' UTR (NM_001081266, exon 1 of 9) 118 NM_001081266 243510 Mm.436553 NM_001081266 ENSMUSG00000107499 Ccdc142 A230058J24Rik coiled-coil domain containing 142 protein-coding unique_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-2 chr2 158212854 158213409 + 0.618644178587692 NA intron (NM_001131021, intron 5 of 15) intron (NM_001131021, intron 5 of 15) 16093 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_21_26_-0.568657119993164_4.47055894216689_0.618644178587692 chr13 49461962 49462390 + 0.618644178587692 NA non-coding (NR_075085, exon 14 of 14) non-coding (NR_075085, exon 14 of 14) 40562 NM_001276399 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak1_21_26_-0.568657119993164_4.47055894216689_0.618644178587692 chr19 27217057 27217446 + 0.618644178587692 NA 5' UTR (NM_013703, exon 1 of 19) 5' UTR (NM_013703, exon 1 of 19) 231 NM_001161420 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-2 chr1 151226524 151226761 + 0.618644178587692 NA Intergenic Intergenic 88608 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-2 chr8 24568202 24568459 + 0.618644178587692 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 8003 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-3 chr11 16831630 16832148 + 0.618644178587692 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 79686 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_21_26_-0.568657119993164_4.47055894216689_0.618644178587692-5 chr3 122088125 122088340 + 0.618644178587692 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 43772 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689 chr1 186705535 186705861 + 0.618644178587689 NA 5' UTR (NM_001329107, exon 1 of 8) 5' UTR (NM_001329107, exon 1 of 8) 291 NM_009367 21808 Mm.18213 NM_009367 ENSMUSG00000039239 Tgfb2 BB105277|Tgf-beta2|Tgfb-2 transforming growth factor, beta 2 protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-7 chr4 84100559 84100946 + 0.618644178587689 NA Intergenic Intergenic -55873 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-2 chr14 45477115 45477357 + 0.618644178587689 NA intron (NM_001360525, intron 4 of 15) intron (NM_001360525, intron 4 of 15) 52829 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-8 chr7 100911431 100912155 + 0.618644178587689 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 20368 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-3 chr14 76664481 76664967 + 0.618644178587689 NA Intergenic Intergenic -12844 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-2 chr13 67080794 67081283 + 0.618644178587689 NA intron (NM_001012449, intron 1 of 2) intron (NM_001012449, intron 1 of 2) 507 NM_001012448 432769 Mm.458849 NM_001012325 ENSMUSG00000058883 Zfp708 Rslcan11 zinc finger protein 708 protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-10 chr9 98601026 98601561 + 0.618644178587689 NA intron (NM_025485, intron 1 of 7) intron (NM_025485, intron 1 of 7) 386 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-6 chr19 38016029 38016309 + 0.618644178587689 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 27408 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-5 chr13 80941141 80941542 + 0.618644178587689 NA intron (NR_103550, intron 2 of 4) intron (NR_103550, intron 2 of 4) 938 NR_103550 71416 Mm.415500 NR_103550 5430425K12Rik - RIKEN cDNA 5430425K12 gene ncRNA common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-9 chr9 65826917 65827285 + 0.618644178587689 NA intron (NM_172536, intron 1 of 9) intron (NM_172536, intron 1 of 9) 463 NM_172536 214812 Mm.139231 NM_172536 ENSMUSG00000040524 Zfp609 9830165N24|BC016271|Znf609|mKIAA0295 zinc finger protein 609 protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-4 chr18 60718987 60719590 + 0.618644178587689 NA intron (NM_001348146, intron 1 of 6) B4A|SINE|B4 8278 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-6 chr4 140631254 140631735 + 0.618644178587689 NA intron (NM_001290803, intron 1 of 28) intron (NM_001290803, intron 1 of 28) 17262 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-7 chr3 88593976 88594232 + 0.618644178587689 NA Intergenic Intergenic 14496 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-3 chr10 61759338 61759765 + 0.618644178587689 NA intron (NM_207000, intron 1 of 8) intron (NM_207000, intron 1 of 8) -15186 NR_039568 100628583 NR_039568 ENSMUSG00000093017 Mir5108 mmu-mir-5108|mu-mir-5108 microRNA 5108 ncRNA common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689 chr1 62768130 62768469 + 0.618644178587689 NA intron (NM_001077404, intron 10 of 16) intron (NM_001077404, intron 10 of 16) 26433 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689 chr10 24595836 24596362 + 0.618644178587689 NA intron (NM_010217, intron 2 of 4) intron (NM_010217, intron 2 of 4) 657 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-10 chrX 153723708 153724130 + 0.618644178587689 NA 5' UTR (NM_027327, exon 1 of 4) 5' UTR (NM_027327, exon 1 of 4) 365 NM_027327 70123 Mm.146408 NM_027327 ENSMUSG00000086316 Nbdy 2210013O21Rik|AI181827|Thp5 negative regulator of P-body association protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-7 chr17 25727981 25728415 + 0.618644178587689 NA promoter-TSS (NM_145409) promoter-TSS (NM_145409) 481 NM_001357176 106707 Mm.24603 NM_028009 ENSMUSG00000041199 Rpusd1 2310051D06Rik|AU019540|Rlucl RNA pseudouridylate synthase domain containing 1 protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-5 chr3 89430508 89430893 + 0.618644178587689 NA promoter-TSS (NM_026869) promoter-TSS (NM_026869) -40 NM_001293767 68911 Mm.22521 NM_026869 ENSMUSG00000047824 Pygo2 1190004M21Rik pygopus 2 protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-8 chr7 3664985 3665407 + 0.618644178587689 NA TTS (NM_181820) TTS (NM_181820) 644 NM_027203 69757 Mm.389782 NM_027203 ENSMUSG00000078813 Leng1 1500001K17Rik leukocyte receptor cluster (LRC) member 1 protein-coding common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-3 chr14 51063547 51063812 + 0.618644178587689 NA Intergenic Intergenic -6437 NM_001011875 497106 Mm.379740 NM_001011875 ENSMUSG00000068407 Rnase12 Rai1 ribonuclease, RNase A family, 12 (non-active) protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-8 chr3 89337433 89337878 + 0.618644178587689 NA intron (NM_007910, intron 1 of 3) CpG 373 NM_007910 13639 Mm.16332 NM_007910 ENSMUSG00000028040 Efna4 EFL-4|Epl4|LERK-4 ephrin A4 protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-8 chr6 124827972 124828250 + 0.618644178587689 NA intron (NM_013700, intron 1 of 19) intron (NM_013700, intron 1 of 19) 1373 NM_001326594 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-8 chr9 32710623 32710901 + 0.618644178587689 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 14720 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-6 chr4 32055406 32055706 + 0.618644178587689 NA Intergenic Intergenic 91449 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-7 chr8 110828882 110829151 + 0.618644178587689 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 9582 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-7 chr2 32396389 32396621 + 0.618644178587689 NA exon (NM_133783, exon 1 of 7) exon (NM_133783, exon 1 of 7) 615 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-5 chr19 3810489 3810725 + 0.618644178587689 NA intron (NM_001167885, intron 12 of 12) intron (NM_001167885, intron 12 of 12) -41166 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-2 chr12 79649760 79650058 + 0.618644178587689 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 274824 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-4 chr12 85624060 85624466 + 0.618644178587689 NA intron (NM_001205053, intron 2 of 3) intron (NM_001205053, intron 2 of 3) 24245 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-3 chr17 24469746 24470217 + 0.618644178587689 NA promoter-TSS (NM_025954) promoter-TSS (NM_025954) -492 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689 chr11 16756585 16757156 + 0.618644178587689 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 4667 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-5 chr19 44407843 44408318 + 0.618644178587689 NA promoter-TSS (NM_009127) promoter-TSS (NM_009127) -371 NM_009127 20249 Mm.267377 NM_009127 ENSMUSG00000037071 Scd1 AA589638|AI265570|Scd|Scd-1|ab stearoyl-Coenzyme A desaturase 1 protein-coding common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-2 chr15 74923301 74923686 + 0.618644178587689 NA Intergenic Intergenic -31558 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689 chr10 56469296 56469754 + 0.618644178587689 NA intron (NR_152769, intron 4 of 4) intron (NR_152769, intron 4 of 4) 37544 NR_152768 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-4 chr17 29427790 29428229 + 0.618644178587689 NA Intergenic Intergenic -63036 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-2 chr10 60569794 60570473 + 0.618644178587689 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 126357 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-9 chr9 48604716 48605164 + 0.618644178587689 NA exon (NM_010924, exon 1 of 3) exon (NM_010924, exon 1 of 3) 183 NM_010924 18113 Mm.8362 NM_010924 ENSMUSG00000032271 Nnmt - nicotinamide N-methyltransferase protein-coding common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-6 chr3 151445716 151446022 + 0.618644178587689 NA intron (NM_133222, intron 2 of 15) intron (NM_133222, intron 2 of 15) 7987 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-6 chr15 80560772 80561143 + 0.618644178587689 NA promoter-TSS (NM_001163189) promoter-TSS (NM_001163189) -487 NM_001163189 383075 Mm.297626 NM_001163189 ENSMUSG00000050439 Enthd1 Gm1242|Gm86 ENTH domain containing 1 protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-4 chr2 72296968 72297753 + 0.618644178587689 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 11659 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-5 chr4 32175699 32176176 + 0.618644178587689 NA Intergenic Intergenic 211830 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-3 chr15 77910317 77910573 + 0.618644178587689 NA Intergenic Intergenic 18549 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-4 chr16 37777886 37778164 + 0.618644178587689 NA intron (NM_008047, intron 2 of 10) (TC)n|Simple_repeat|Simple_repeat 970 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-9 chr7 100371404 100371676 + 0.618644178587689 NA promoter-TSS (NM_001017985) promoter-TSS (NM_001017985) 356 NM_028292 72590 Mm.177502 NM_028292 ENSMUSG00000030718 Ppme1 1110069N17Rik|2700017M01Rik|PME-1|Pme1 protein phosphatase methylesterase 1 protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-9 chr4 109201538 109201833 + 0.618644178587689 NA intron (NM_001346502, intron 1 of 23) intron (NM_001346502, intron 1 of 23) 587 NM_133885 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak2_31_18_0.475057551200966_4.48545628904407_0.618644178587689-5 chr2 92375721 92376044 + 0.618644178587689 NA non-coding (NR_028114, exon 2 of 11) non-coding (NR_028114, exon 2 of 11) 643 NM_145122 18633 Mm.202782 NM_145122 ENSMUSG00000027222 Pex16 - peroxisomal biogenesis factor 16 protein-coding unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-7 chr4 149989663 149989993 + 0.618644178587689 NA intron (NM_001291004, intron 3 of 4) intron (NM_001291004, intron 3 of 4) 13408 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-6 chr3 83876242 83876809 + 0.618644178587689 NA Intergenic Intergenic -34917 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-3 chr15 78809020 78809554 + 0.618644178587689 NA Intergenic Intergenic -6245 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak2_30_18_0.429577005682441_4.46271601628481_0.618644178587689-8 chrX 7573747 7574128 + 0.618644178587689 NA exon (NM_001290574, exon 1 of 4) exon (NM_001290574, exon 1 of 4) 337 NR_029473 78185 Mm.160055 NR_029473 ENSMUSG00000039545 Flicr 4930524L23Rik|Ppp1r3fos Foxp3 regulating long intergenic noncoding RNA ncRNA unique_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689-2 chr11 70220232 70220804 + 0.618644178587689 NA exon (NM_172371, exon 1 of 4) exon (NM_172371, exon 1 of 4) 476 NM_172371 69309 Mm.93266 NM_172371 ENSMUSG00000044367 Slc16a13 1700007D07Rik solute carrier family 16 (monocarboxylic acid transporters), member 13 protein-coding common_peak1_31_18_0.475057551200966_4.48545628904407_0.618644178587689 chr10 39417229 39417606 + 0.618644178587689 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 47618 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_30_18_0.429577005682441_4.46271601628481_0.618644178587689-4 chr18 17290598 17290907 + 0.618644178587689 NA Intergenic Intergenic -55270 NR_033607 664619 Mm.250005 NR_033607 4921533I20Rik - PRP18 pre-mRNA processing factor 18 homolog pseudogene pseudo common_peak1_56_36_0.340545691143651_5.37972621120078_0.618527319161325-2 chr3 95995800 95996368 + 0.618527319161325 NA promoter-TSS (NM_023320) promoter-TSS (NM_023320) -245 NM_023320 67220 Mm.458147 NM_023320 ENSMUSG00000015745 Plekho1 2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2 pleckstrin homology domain containing, family O member 1 protein-coding common_peak1_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-2 chr16 11024214 11024745 + 0.618527319161325 NA Intergenic Intergenic 15581 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak1_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-3 chr2 18057675 18058048 + 0.618527319161325 NA promoter-TSS (NR_106115) promoter-TSS (NR_106115) 15 NR_106115 102466840 NR_106115 ENSMUSG00000099050 Mir7655 Gm27794|mmu-mir-7655 microRNA 7655 ncRNA common_peak2_56_36_0.340545691143651_5.37972621120078_0.618527319161325-3 chr8 25093884 25094254 + 0.618527319161325 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 7742 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-4 chr4 63558307 63559195 + 0.618527319161325 NA promoter-TSS (NM_001356354) promoter-TSS (NM_001356354) -12 NM_001356355 230279 Mm.41523 NM_144905 ENSMUSG00000045917 Tmem268 6330416G13Rik|AW492431|bM230C2.2 transmembrane protein 268 protein-coding common_peak2_43_47_-0.405787098124096_5.38206895165911_0.618527319161325 chr16 4213829 4214531 + 0.618527319161325 NA promoter-TSS (NM_001025432) promoter-TSS (NM_001025432) -776 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak2_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-3 chr3 34020091 34020405 + 0.618527319161325 NA intron (NM_001113189, intron 1 of 16) CpG 169 NM_001113189 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak1_43_47_-0.405787098124096_5.38206895165911_0.618527319161325 chr1 15805690 15806178 + 0.618527319161325 NA non-coding (NR_152944, exon 1 of 9) non-coding (NR_152944, exon 1 of 9) 288 NM_001286628 21749 Mm.4306 NM_009352 ENSMUSG00000025925 Terf1 Pin2|Trbf1|Trf1 telomeric repeat binding factor 1 protein-coding common_peak1_56_36_0.340545691143651_5.37972621120078_0.618527319161325-3 chr4 129262885 129263442 + 0.618527319161325 NA Intergenic Intergenic -1759 NM_001285867 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak2_56_36_0.340545691143651_5.37972621120078_0.618527319161325 chr11 83816487 83817070 + 0.618527319161325 NA Intergenic Intergenic -34091 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-2 chr2 52623397 52624137 + 0.618527319161325 NA intron (NM_001037099, intron 2 of 13) intron (NM_001037099, intron 2 of 13) 52092 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding common_peak2_56_36_0.340545691143651_5.37972621120078_0.618527319161325-2 chr14 29978421 29979052 + 0.618527319161325 NA intron (NM_027493, intron 1 of 12) CpG 399 NM_027493 56249 Mm.215110 NM_027493 ENSMUSG00000015971 Actr8 5730542K05Rik|ARP8 ARP8 actin-related protein 8 protein-coding common_peak1_56_36_0.340545691143651_5.37972621120078_0.618527319161325 chr11 96766973 96767638 + 0.618527319161325 NA TTS (NM_001163389) TTS (NM_001163389) 10250 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak2_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-5 chr8 64655770 64656666 + 0.618527319161325 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 36891 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-5 chr7 84547974 84548655 + 0.618527319161325 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 19360 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_43_47_-0.405787098124096_5.38206895165911_0.618527319161325-4 chr7 84330500 84330990 + 0.618527319161325 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 79293 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_179_127_0.197258188280095_7.09862909414005_0.618315364196883 chr13 54302348 54303763 + 0.618315364196883 NA Intergenic CpG -68294 NM_009946 12890 Mm.268902 NM_009946 ENSMUSG00000025867 Cplx2 921-L|AI413745|AW492120|Gm34843 complexin 2 protein-coding common_peak1_154_147_-0.226401906895534_7.09625241218118_0.618315364196883 chr10 62650457 62652282 + 0.618315364196883 NA promoter-TSS (NM_053183) promoter-TSS (NM_053183) -151 NM_053183 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak2_146_102_0.220638238837046_6.79681964660174_0.618295750456594 chr11 98935991 98937390 + 0.618295750456594 NA Intergenic Intergenic -1006 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_124_120_-0.243962455941651_6.79688200930377_0.618295750456569 chr9 52048068 52049151 + 0.618295750456569 NA promoter-TSS (NR_023357) promoter-TSS (NR_023357) 96 NR_023357 629557 Mm.422775 NR_023357 Gm6981 EG629557 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_189_177_-0.20102303681386_7.37522191255947_0.617826128800773 chr8 128653434 128655922 + 0.617826128800773 NA Intergenic Intergenic -30976 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_117_80_0.252496102864811_6.46609805431703_0.617317028388358-2 chr8 94600838 94601652 + 0.617317028388358 NA promoter-TSS (NM_026274) promoter-TSS (NM_026274) 481 NM_028221 102122 Mm.250425 NM_028221 ENSMUSG00000031774 Fam192a 1700001O11Rik|2310065K24Rik|AI596259|Nip30 family with sequence similarity 192, member A protein-coding common_peak1_117_80_0.252496102864811_6.46609805431703_0.617317028388358 chr3 89772965 89774210 + 0.617317028388358 NA promoter-TSS (NM_027315) promoter-TSS (NM_027315) -22 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding common_peak2_97_96_-0.273609678394317_6.46310800298997_0.617317028388333 chr12 79600665 79602397 + 0.617317028388333 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 304180 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_97_96_-0.273609678394317_6.46310800298997_0.617317028388333 chr10 60577391 60578683 + 0.617317028388333 NA intron (NM_001252635, intron 7 of 68) ID_B1|SINE|B4 118453 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding common_peak1_110_108_-0.263442961065273_6.63646284424429_0.616769221074732 chr8 122146784 122147533 + 0.616769221074732 NA Intergenic Intergenic -134983 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_110_108_-0.263442961065273_6.63646284424429_0.616769221074732 chr12 52504068 52504942 + 0.616769221074732 NA Intergenic CpG -11572 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak2_110_108_-0.263442961065273_6.63646284424429_0.616769221074732-2 chr4 57567575 57569028 + 0.616769221074732 NA promoter-TSS (NM_172868) promoter-TSS (NM_172868) 53 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding common_peak2_103_70_0.261681095803942_6.28058766740665_0.61673759389873 chr10 62601580 62602776 + 0.61673759389873 NA exon (NM_019553, exon 1 of 15) exon (NM_019553, exon 1 of 15) 120 NM_019553 56200 Mm.413275 NM_019553 ENSMUSG00000020075 Ddx21 AI255159|AL022742|D10Ertd645e|D10Wsu42e DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein-coding common_peak2_84_85_-0.303831978185012_6.27434876560959_0.61673759389873-2 chr4 62524422 62525295 + 0.61673759389873 NA promoter-TSS (NM_177607) promoter-TSS (NM_177607) 156 NM_021498 59001 Mm.27444 NM_021498 ENSMUSG00000028394 Pole3 1810034K18Rik|YBL1 polymerase (DNA directed), epsilon 3 (p17 subunit) protein-coding common_peak2_84_85_-0.303831978185012_6.27434876560959_0.61673759389873 chr18 36348754 36349558 + 0.61673759389873 NA intron (NM_001081365, intron 1 of 2) CpG 532 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding common_peak2_140_134_-0.229373671094566_6.96212876150355_0.616156110706539 chr8 44937145 44939056 + 0.616156110706539 NA Intergenic CpG -12108 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_248_228_-0.177099544551815_7.75065401582104_0.61609550005044 chr15 99029220 99031130 + 0.61609550005044 NA 5' UTR (NM_009448, exon 1 of 4) 5' UTR (NM_009448, exon 1 of 4) 284 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_248_228_-0.177099544551815_7.75065401582104_0.61609550005044 chr15 99029212 99031110 + 0.61609550005044 NA 5' UTR (NM_009448, exon 1 of 4) 5' UTR (NM_009448, exon 1 of 4) 270 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak2_156_148_-0.217751209437755_7.11029291574328_0.61601214230358 chr9 102762877 102764301 + 0.61601214230358 NA Intergenic Intergenic 23941 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_190_178_-0.201585592317239_7.38302298110564_0.615926386650228 chr16 10976540 10978776 + 0.615926386650228 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 15463 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_191_178_-0.194105069538739_7.38676324249489_0.615926386650228 chr13 85287842 85289178 + 0.615926386650228 NA exon (NM_145452, exon 1 of 25) exon (NM_145452, exon 1 of 25) 976 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_218_156_0.18357530932851_7.38640840355588_0.615926386650228 chr12 80229402 80231859 + 0.615926386650228 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 29741 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_147_103_0.216411063769862_6.80864525002602_0.615456870466516 chr3 96239402 96240307 + 0.615456870466516 NA promoter-TSS (NM_178216) promoter-TSS (NM_178216) 480 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_62_65_-0.351023821111619_5.86888220880264_0.615335714844035-2 chr3 121661892 121662951 + 0.615335714844035 NA Intergenic Intergenic -8342 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_62_65_-0.351023821111619_5.86888220880264_0.615335714844035 chr17 84086080 84086462 + 0.615335714844035 NA non-coding (NR_045458, exon 4 of 6) non-coding (NR_045458, exon 4 of 6) 7611 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_62_65_-0.351023821111619_5.86888220880264_0.615335714844035-3 chr7 16098685 16099286 + 0.615335714844035 NA intron (NM_025898, intron 1 of 10) CpG 405 NM_025898 108124 Mm.104540 NM_025898 ENSMUSG00000006024 Napa 1500039N14Rik|AW209189|RA81|SNAP-alpha|SNAPA|SNARE|a-SNAP|hyh N-ethylmaleimide sensitive fusion protein attachment protein alpha protein-coding common_peak2_78_52_0.289647211712078_5.87274406041924_0.615335714844023 chr2 168548447 168549455 + 0.615335714844023 NA intron (NM_001037177, intron 3 of 6) intron (NM_001037177, intron 3 of 6) 41414 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_78_52_0.289647211712078_5.87274406041924_0.615335714844023 chr16 37815004 37815809 + 0.615335714844023 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 38351 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_78_52_0.289647211712078_5.87274406041924_0.615335714844023-2 chr18 49832400 49833401 + 0.615335714844023 NA promoter-TSS (NM_001081371) promoter-TSS (NM_001081371) -97 NM_001081371 240283 Mm.257790 NM_001081371 ENSMUSG00000037416 Dmxl1 C630007L23Rik|D030030C22 Dmx-like 1 protein-coding common_peak1_91_61_0.281602011836136_6.09499731630494_0.614532557650135-3 chr3 123508623 123509288 + 0.614532557650135 NA promoter-TSS (NR_028574) promoter-TSS (NR_028574) -619 NR_028574 69895 Mm.260791 NR_028574 ENSMUSG00000104960 Snhg8 1110065M07Rik|2010109N14Rik small nucleolar RNA host gene 8 ncRNA common_peak1_90_61_0.265945934069124_6.08716927742144_0.614532557650135-2 chr8 36025419 36026506 + 0.614532557650135 NA Intergenic Intergenic -68866 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_90_61_0.265945934069124_6.08716927742144_0.614532557650135 chr6 91202411 91203266 + 0.614532557650135 NA Intergenic Intergenic -9926 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_91_61_0.281602011836136_6.09499731630494_0.614532557650135-2 chr13 65240445 65241821 + 0.614532557650135 NA Intergenic CpG -35417 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding common_peak1_91_61_0.281602011836136_6.09499731630494_0.614532557650135 chr10 94546117 94546999 + 0.614532557650135 NA intron (NM_172051, intron 1 of 3) MER5B|DNA|hAT-Charlie -4314 NM_001359761 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_73_75_-0.324021751959387_6.08591663746389_0.614532557650123-2 chr5 32853330 32854175 + 0.614532557650123 NA intron (NM_194340, intron 1 of 10) intron (NM_194340, intron 1 of 10) 478 NM_194340 215476 Mm.248721 NM_194340 ENSMUSG00000054280 Prr14l 6030436E02Rik|C330019G07Rik|Prl14l proline rich 14-like protein-coding common_peak1_73_75_-0.324021751959387_6.08591663746389_0.614532557650123 chr10 85916201 85916962 + 0.614532557650123 NA 5' UTR (NM_001302886, exon 2 of 12) 5' UTR (NM_001302886, exon 2 of 12) 148 NM_181650 72843 Mm.25307 NM_181650 ENSMUSG00000035529 Prdm4 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1 PR domain containing 4 protein-coding common_peak2_53_56_-0.360343163264582_5.65271843253245_0.614476839801569 chr11 83941838 83942601 + 0.614476839801569 NA exon (NM_030096, exon 1 of 15) exon (NM_030096, exon 1 of 15) 129 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_53_56_-0.360343163264582_5.65271843253245_0.614476839801569-2 chr12 69197243 69197771 + 0.614476839801569 NA non-coding (NR_033222, exon 1 of 2) non-coding (NR_033222, exon 1 of 2) 296 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA common_peak1_67_44_0.310922781433533_5.64731448704644_0.614476839801569-4 chr4 132535543 132536459 + 0.614476839801569 NA promoter-TSS (NM_007512) promoter-TSS (NM_007512) 442 NM_172400 68598 Mm.29685 NM_172400 ENSMUSG00000054405 Dnajc8 1110021D09Rik|2010009J04Rik|AL024084|AU019262|AU044514 DnaJ heat shock protein family (Hsp40) member C8 protein-coding common_peak1_67_44_0.310922781433533_5.64731448704644_0.614476839801569-3 chr3 95871042 95872031 + 0.614476839801569 NA promoter-TSS (NR_040446) promoter-TSS (NR_040446) 14 NR_040446 100042889 Mm.440109 NR_040446 ENSMUSG00000080727 C920021L13Rik - RIKEN cDNA C920021L13 gene ncRNA common_peak2_67_44_0.310922781433533_5.64731448704644_0.614476839801569 chr15 8444723 8445339 + 0.614476839801569 NA promoter-TSS (NM_027707) promoter-TSS (NM_027707) -568 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak1_67_44_0.310922781433533_5.64731448704644_0.614476839801569 chr17 45748806 45749643 + 0.614476839801569 NA non-coding (NR_152153, exon 2 of 5) non-coding (NR_152153, exon 2 of 5) 14718 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak2_52_56_-0.387119958894881_5.6393300347173_0.614476839801569 chr5 113215903 113216303 + 0.614476839801569 NA Intergenic Intergenic -10806 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak2_67_44_0.310922781433533_5.64731448704644_0.614476839801569-2 chr18 75344192 75344916 + 0.614476839801569 NA Intergenic Intergenic 22534 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_67_44_0.310922781433533_5.64731448704644_0.614476839801569-2 chr17 70845953 70846851 + 0.614476839801569 NA 5' UTR (NM_001164077, exon 1 of 2) 5' UTR (NM_001164077, exon 1 of 2) 375 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_67_44_0.310922781433533_5.64731448704644_0.614476839801569-3 chr7 92874319 92874969 + 0.614476839801569 NA promoter-TSS (NM_028243) promoter-TSS (NM_028243) -397 NM_001080995 74041 Mm.26468 NM_028729 ENSMUSG00000030641 Ddias 4632434I11Rik|noxin DNA damage-induced apoptosis suppressor protein-coding common_peak2_53_56_-0.360343163264582_5.65271843253245_0.614476839801569-3 chr7 65370772 65371175 + 0.614476839801569 NA 5' UTR (NM_001163574, exon 1 of 27) 5' UTR (NM_001163574, exon 1 of 27) 271 NM_001163574 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak2_53_56_-0.360343163264582_5.65271843253245_0.614476839801569-4 chr9 66974887 66975420 + 0.614476839801569 NA exon (NM_030717, exon 1 of 6) exon (NM_030717, exon 1 of 6) 331 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak2_98_97_-0.27386323706324_6.47777822558359_0.613753565865924 chr5 8055951 8057207 + 0.613753565865924 NA promoter-TSS (NM_001080974) promoter-TSS (NM_001080974) 37 NM_001080974 109552 Mm.96211 NM_025618 ENSMUSG00000003161 Sri 2210417O06Rik|2900070H08Rik|Sor sorcin protein-coding common_peak1_118_81_0.246882922719254_6.48099346597771_0.613753565865924 chr16 96127097 96128396 + 0.613753565865924 NA promoter-TSS (NM_008251) promoter-TSS (NM_008251) -21 NM_008251 15312 Mm.2756 NM_008251 ENSMUSG00000040681 Hmgn1 HMG-14|Hmg14 high mobility group nucleosomal binding domain 1 protein-coding common_peak2_165_116_0.210903921734269_6.97581668045054_0.613640312731052 chr19 8991000 8992361 + 0.613640312731052 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 2396 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_165_116_0.210903921734269_6.97581668045054_0.613640312731052 chr11 115830704 115832693 + 0.613640312731052 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 7640 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_112_109_-0.251037011864408_6.65584120759246_0.613619973925068 chr19 8983730 8984455 + 0.613619973925068 NA Intergenic Intergenic -5192 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_111_109_-0.263770578879224_6.64947442408505_0.613619973925068 chr5 36225377 36226378 + 0.613619973925068 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) 21856 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak2_112_109_-0.251037011864408_6.65584120759246_0.613619973925068 chr7 28375132 28376749 + 0.613619973925068 NA TTS (NM_011756) TTS (NM_011756) -3278 NM_001083912 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak2_132_92_0.224608713438002_6.65146316782703_0.613619973925043 chr19 40253026 40253927 + 0.613619973925043 NA intron (NM_016861, intron 1 of 6) Charlie23a|DNA|hAT-Charlie 18140 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak1_133_92_0.235339226959113_6.65682842458759_0.613619973925043 chr3 98378270 98379335 + 0.613619973925043 NA Intergenic Intergenic -3679 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_86_86_-0.287194872244007_6.29934605972672_0.612703452660502 chr7 64250026 64251007 + 0.612703452660502 NA promoter-TSS (NR_105844) promoter-TSS (NR_105844) -417 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA common_peak1_104_71_0.255211613757703_6.29753080832116_0.612703452660502 chr17 56584983 56585803 + 0.612703452660502 NA promoter-TSS (NM_001355463) promoter-TSS (NM_001355463) 411 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding common_peak1_126_122_-0.244874883765324_6.82007706345658_0.612668397803523 chr15 77036862 77037586 + 0.612668397803523 NA intron (NM_013593, intron 1 of 3) CT-rich|Low_complexity|Low_complexity -7851 NM_001163621 71939 Mm.34173 NM_028010 ENSMUSG00000033576 Apol6 2310076O14Rik apolipoprotein L 6 protein-coding common_peak1_148_104_0.212251878859144_6.82037145709569_0.612668397803498 chr8 90876477 90877983 + 0.612668397803498 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 48395 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_47_30_0.349624356485131_5.12900848862944_0.612304185853042-4 chr7 116201144 116201730 + 0.612304185853042 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -2876 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_48_30_0.37916183297918_5.14377722687646_0.612304185853042-4 chr8 95488108 95488416 + 0.612304185853042 NA intron (NM_009974, intron 1 of 11) intron (NM_009974, intron 1 of 11) 558 NM_009974 13000 Mm.51136 NM_009974 ENSMUSG00000046707 Csnk2a2 1110035J23Rik|C77789|CK2 casein kinase 2, alpha prime polypeptide protein-coding common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042-6 chr5 149389841 149390258 + 0.612304185853042 NA Intergenic Intergenic -21700 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_48_30_0.37916183297918_5.14377722687646_0.612304185853042-3 chr6 34719403 34720235 + 0.612304185853042 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 10375 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042-7 chr7 67742143 67742660 + 0.612304185853042 NA intron (NM_207663, intron 2 of 4) intron (NM_207663, intron 2 of 4) 17341 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042-3 chr14 61173047 61173451 + 0.612304185853042 NA intron (NM_172809, intron 2 of 9) CpG 34792 NM_015788 50720 Mm.440703 NM_015788 ENSMUSG00000048279 Sacs A230052M14|DNAJC29|E130115J16Rik sacsin protein-coding common_peak2_47_30_0.349624356485131_5.12900848862944_0.612304185853042-2 chr5 21424949 21425524 + 0.612304185853042 NA promoter-TSS (NM_029195) promoter-TSS (NM_029195) 333 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042 chr11 22286196 22286909 + 0.612304185853042 NA intron (NM_001252515, intron 1 of 24) CpG 243 NM_153078 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding common_peak1_48_30_0.37916183297918_5.14377722687646_0.612304185853042 chr13 112447486 112447929 + 0.612304185853042 NA Intergenic Intergenic -16363 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak1_48_30_0.37916183297918_5.14377722687646_0.612304185853042-5 chr9 110656539 110657043 + 0.612304185853042 NA intron (NM_028312, intron 1 of 6) CpG 288 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042-5 chr3 108013593 108014316 + 0.612304185853042 NA intron (NM_010358, intron 7 of 7) intron (NM_010358, intron 7 of 7) 4019 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding common_peak2_48_30_0.37916183297918_5.14377722687646_0.612304185853042 chr1 189921511 189922161 + 0.612304185853042 NA intron (NM_026796, intron 1 of 11) intron (NM_026796, intron 1 of 11) 455 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042-2 chr14 54106794 54107236 + 0.612304185853042 NA Intergenic Intergenic 146914 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_48_30_0.37916183297918_5.14377722687646_0.612304185853042-2 chr6 37432900 37433478 + 0.612304185853042 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 8959 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_47_30_0.349624356485131_5.12900848862944_0.612304185853042 chr14 56812011 56812379 + 0.612304185853042 NA promoter-TSS (NM_001253753) promoter-TSS (NM_001253753) 206 NR_152252 100503842 Mm.297636 NR_152252 ENSMUSG00000100017 2410022M11Rik - RIKEN cDNA 2410022M11 gene ncRNA common_peak2_47_30_0.349624356485131_5.12900848862944_0.612304185853042-3 chr5 149389844 149390160 + 0.612304185853042 NA Intergenic Intergenic -21747 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_48_30_0.37916183297918_5.14377722687646_0.612304185853042-3 chr9 70503469 70503806 + 0.612304185853042 NA promoter-TSS (NM_001357494) promoter-TSS (NM_001357494) 138 NM_033604 93836 Mm.29783 NM_033604 ENSMUSG00000032217 Rnf111 ARK|Arkadia ring finger 111 protein-coding common_peak1_48_30_0.37916183297918_5.14377722687646_0.612304185853042-2 chr2 30716012 30716660 + 0.612304185853042 NA Intergenic Intergenic -4874 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_47_30_0.349624356485131_5.12900848862944_0.612304185853042-4 chr18 62530800 62531501 + 0.612304185853042 NA intron (NM_134136, intron 5 of 21) intron (NM_134136, intron 5 of 21) 12702 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak2_35_40_-0.465840755945379_5.12463162664539_0.612304185853036 chr15 61608057 61608486 + 0.612304185853036 NA Intergenic Intergenic 166180 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA common_peak1_35_40_-0.465840755945379_5.12463162664539_0.612304185853036 chr11 121673493 121674045 + 0.612304185853036 NA promoter-TSS (NM_178664) promoter-TSS (NM_178664) -618 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak1_666_579_-0.106292770205698_9.12676270491209_0.611861612480211 chr13 5861608 5866863 + 0.611861612480211 NA intron (NM_011803, intron 1 of 3) intron (NM_011803, intron 1 of 3) 2746 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_319_288_-0.153448657821981_8.09820135358969_0.611828517162398 chr9 63745126 63748553 + 0.611828517162398 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 11155 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_183_130_0.195320341112316_7.13108317209361_0.611504663998258 chr9 25250977 25252393 + 0.611504663998258 NA promoter-TSS (NM_001205367) promoter-TSS (NM_001205367) -306 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_176_165_-0.201857723370035_7.27411056966191_0.611178170570748 chr19 4192199 4193337 + 0.611178170570748 NA exon (NM_031868, exon 2 of 7) exon (NM_031868, exon 2 of 7) 594 NM_031868 19045 Mm.1970 NM_031868 ENSMUSG00000040385 Ppp1ca Ppp1c|dism2 protein phosphatase 1, catalytic subunit, alpha isoform protein-coding common_peak2_175_165_-0.209973987896352_7.27005243739875_0.611178170570748 chr13 59769268 59770927 + 0.611178170570748 NA promoter-TSS (NM_026921) promoter-TSS (NM_026921) 131 NR_015349 13996 Mm.490435 NR_015349 Etohd2 AW491659 ethanol decreased 2 ncRNA common_peak1_202_144_0.189608001363218_7.27471309069654_0.611178170570699 chr3 57845465 57848298 + 0.611178170570699 NA intron (NM_019410, intron 1 of 2) CpG 876 NM_019410 18645 Mm.271744 NM_019410 ENSMUSG00000027805 Pfn2 Pfn profilin 2 protein-coding common_peak1_166_117_0.207229322664703_6.98625771069419_0.611164403819789 chr2 155825445 155827233 + 0.611164403819789 NA exon (NM_010579, exon 1 of 6) exon (NM_010579, exon 1 of 6) 586 NM_010579 16418 Mm.271674 NM_010579 ENSMUSG00000027613 Eif6 1110004P11|AA408895|CAB|Itgb4bp|eIF-6|imc-415|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding common_peak1_166_117_0.207229322664703_6.98625771069419_0.611164403819789-2 chr7 13033605 13035075 + 0.611164403819789 NA TTS (NM_001168469) TTS (NM_001168469) 437 NM_001360733 68953 Mm.295670 NM_026885 ENSMUSG00000033916 Chmp2a 1500016L11Rik|mVps2 charged multivesicular body protein 2A protein-coding common_peak1_58_37_0.351473571879095_5.42366429938313_0.611014125894502 chr16 92552518 92553022 + 0.611014125894502 NA Intergenic Intergenic 54623 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak2_44_48_-0.403341696688624_5.4130389957709_0.611014125894502 chr15 31453031 31453931 + 0.611014125894502 NA exon (NM_145852, exon 1 of 5) exon (NM_145852, exon 1 of 5) 208 NM_145852 252967 Mm.436668 NM_145852 ENSMUSG00000022236 Ropn1l ASP|AV047578|Akapasp ropporin 1-like protein-coding common_peak1_58_37_0.351473571879095_5.42366429938313_0.611014125894502-5 chr5 77354783 77355868 + 0.611014125894502 NA intron (NM_001159518, intron 3 of 5) intron (NM_001159518, intron 3 of 5) 44841 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak2_57_37_0.326985507933681_5.41142026741043_0.611014125894502 chr11 20830221 20830899 + 0.611014125894502 NA intron (NM_173752, intron 1 of 4) CpG 548 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_58_37_0.351473571879095_5.42366429938313_0.611014125894502 chr14 25475684 25476031 + 0.611014125894502 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 16672 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_44_48_-0.403341696688624_5.4130389957709_0.611014125894502-4 chr7 24529866 24530535 + 0.611014125894502 NA promoter-TSS (NM_153134) promoter-TSS (NM_153134) -448 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding common_peak1_44_48_-0.403341696688624_5.4130389957709_0.611014125894502 chrX 13070670 13071258 + 0.611014125894502 NA promoter-TSS (NM_009481) promoter-TSS (NM_009481) -534 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak2_44_48_-0.403341696688624_5.4130389957709_0.611014125894502-5 chrX 13070679 13071279 + 0.611014125894502 NA promoter-TSS (NM_009481) promoter-TSS (NM_009481) -519 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak2_44_48_-0.403341696688624_5.4130389957709_0.611014125894502-2 chr2 151038641 151039248 + 0.611014125894502 NA intron (NM_026086, intron 1 of 1) intron (NM_026086, intron 1 of 1) 435 NM_026086 67311 Mm.480682 NM_026086 ENSMUSG00000053916 Nanp 1600031M04Rik|Hdhd4 N-acetylneuraminic acid phosphatase protein-coding common_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502-5 chr6 146725222 146725723 + 0.611014125894502 NA intron (NM_001346666, intron 1 of 11) CpG 542 NM_172734 232533 Mm.322121 NM_172734 ENSMUSG00000001630 Stk38l 4930473A22Rik|Ndr2|Ndr54 serine/threonine kinase 38 like protein-coding common_peak1_58_37_0.351473571879095_5.42366429938313_0.611014125894502-4 chr4 33310384 33311077 + 0.611014125894502 NA intron (NM_001305273, intron 1 of 15) intron (NM_001305273, intron 1 of 15) 419 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak2_58_37_0.351473571879095_5.42366429938313_0.611014125894502-3 chr5 120502951 120503440 + 0.611014125894502 NA intron (NM_023625, intron 1 of 11) intron (NM_023625, intron 1 of 11) 428 NM_023625 71772 Mm.100065 NM_023625 ENSMUSG00000029598 Plbd2 1300012G16Rik|AU019810|P76 phospholipase B domain containing 2 protein-coding common_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502-6 chr8 70459894 70460326 + 0.611014125894502 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 16833 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding unique_peak2_44_48_-0.403341696688624_5.4130389957709_0.611014125894502 chr6 52179346 52180443 + 0.611014125894502 NA intron (NM_010452, intron 3 of 4) intron (NM_010452, intron 3 of 4) 7013 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA unique_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502 chr12 113147371 113147962 + 0.611014125894502 NA Intergenic Intergenic -4346 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_58_37_0.351473571879095_5.42366429938313_0.611014125894502-6 chr5 125045821 125046427 + 0.611014125894502 NA intron (NM_011424, intron 21 of 46) intron (NM_011424, intron 21 of 46) 42649 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502-3 chr3 41320988 41321671 + 0.611014125894502 NA Intergenic Intergenic 171870 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_44_48_-0.403341696688624_5.4130389957709_0.611014125894502-3 chr6 84008461 84009130 + 0.611014125894502 NA 5' UTR (NM_001077694, exon 1 of 55) 5' UTR (NM_001077694, exon 1 of 55) 197 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak1_58_37_0.351473571879095_5.42366429938313_0.611014125894502-2 chr19 10690789 10691196 + 0.611014125894502 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) 2257 NM_001361959 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502-4 chr5 125070861 125071554 + 0.611014125894502 NA intron (NM_011424, intron 14 of 46) MIR|SINE|MIR 67732 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_58_37_0.351473571879095_5.42366429938313_0.611014125894502-2 chr4 139192128 139192624 + 0.611014125894502 NA promoter-TSS (NM_009798) promoter-TSS (NM_009798) -523 NM_009798 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502-2 chr16 14351100 14352060 + 0.611014125894502 NA Intergenic Intergenic -9978 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak1_58_37_0.351473571879095_5.42366429938313_0.611014125894502-3 chr3 86920165 86920809 + 0.611014125894502 NA 5' UTR (NM_001195499, exon 1 of 18) 5' UTR (NM_001195499, exon 1 of 18) 397 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding common_peak1_57_37_0.326985507933681_5.41142026741043_0.611014125894502 chr12 80374006 80374554 + 0.611014125894502 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 17397 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak2_739_639_-0.0995303733690172_9.27216290820285_0.610998833338779 chr8 36609855 36613853 + 0.610998833338779 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 2089 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-11 chr8 110830843 110831521 + 0.610902792227729 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 7416 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729 chr11 43927449 43928215 + 0.610902792227729 NA Intergenic Intergenic -26595 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_39_24_0.398785773623706_4.84324907658658_0.610902792227729 chr12 69457882 69458299 + 0.610902792227729 NA Intergenic Intergenic 17460 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-3 chr15 101330054 101330492 + 0.610902792227729 NA Intergenic Intergenic 37061 NR_033803 77717 Mm.391998 NR_033803 ENSMUSG00000075408 6030408B16Rik AI225877 RIKEN cDNA 6030408B16 gene ncRNA common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-2 chr11 117979074 117979508 + 0.610902792227729 NA Intergenic Intergenic -7566 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_39_24_0.398785773623706_4.84324907658658_0.610902792227729-2 chr16 92552651 92552910 + 0.610902792227729 NA Intergenic Intergenic 54633 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-12 chr8 126837425 126837927 + 0.610902792227729 NA Intergenic Intergenic -11344 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-7 chr3 121469115 121469588 + 0.610902792227729 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 42810 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-5 chr2 3749214 3749918 + 0.610902792227729 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 36108 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-10 chr8 44996844 44997262 + 0.610902792227729 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 46845 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-6 chr2 60747128 60747581 + 0.610902792227729 NA Intergenic Intergenic -24751 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-4 chr17 24644291 24644853 + 0.610902792227729 NA intron (NM_023055, intron 2 of 6) intron (NM_023055, intron 2 of 6) 385 NM_023449 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding unique_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-3 chr4 107066499 107066810 + 0.610902792227729 NA promoter-TSS (NM_175471) promoter-TSS (NM_175471) 212 NM_025500 56280 Mm.29517 NM_025500 ENSMUSG00000028622 Mrpl37 2300004O14Rik|AI132596|MRP-L2|Rpml2 mitochondrial ribosomal protein L37 protein-coding unique_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729 chr14 25759572 25760309 + 0.610902792227729 NA intron (NM_001101433, intron 1 of 3) intron (NM_001101433, intron 1 of 3) 8916 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding common_peak2_39_24_0.398785773623706_4.84324907658658_0.610902792227729-4 chr4 155234174 155234588 + 0.610902792227729 NA Intergenic Intergenic -11846 NM_001357191 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-9 chr8 10665350 10665701 + 0.610902792227729 NA Intergenic Intergenic 216929 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-8 chr5 115340770 115341106 + 0.610902792227729 NA promoter-TSS (NM_026933) promoter-TSS (NM_026933) 223 NM_029645 384281 Mm.229308 NM_029645 ENSMUSG00000029536 Gatc 2010003O18Rik glutamyl-tRNA(Gln) amidotransferase, subunit C protein-coding common_peak2_39_24_0.398785773623706_4.84324907658658_0.610902792227729-5 chr5 107086702 107087204 + 0.610902792227729 NA Intergenic Intergenic 122392 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding unique_peak1_39_24_0.398785773623706_4.84324907658658_0.610902792227729-2 chr2 160880609 160881066 + 0.610902792227729 NA intron (NM_022883, intron 1 of 19) intron (NM_022883, intron 1 of 19) 167 NM_022883 64899 Mm.292111 NM_022883 ENSMUSG00000027412 Lpin3 9130206L11Rik|AA438110|AV236139|mKIAA4023 lipin 3 protein-coding common_peak2_39_24_0.398785773623706_4.84324907658658_0.610902792227729-3 chr2 119897289 119897659 + 0.610902792227729 NA intron (NM_013720, intron 1 of 23) CpG 246 NM_013720 29808 Mm.87532 NM_013720 ENSMUSG00000033943 Mga AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5 MAX gene associated protein-coding common_peak1_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-2 chr11 80377533 80377910 + 0.610902792227722 NA intron (NM_027472, intron 1 of 9) intron (NM_027472, intron 1 of 9) 294 NM_027472 70591 Mm.86860 NM_027472 ENSMUSG00000057181 5730455P16Rik - RIKEN cDNA 5730455P16 gene protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-5 chr2 76672072 76672835 + 0.610902792227722 NA intron (NM_001355080, intron 1 of 4) intron (NM_001355080, intron 1 of 4) 645 NM_001355079 14231 Mm.24720 NM_010222 ENSMUSG00000002732 Fkbp7 23kDa|FKBP-7|FKBP23 FK506 binding protein 7 protein-coding unique_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722 chr13 49321195 49321581 + 0.610902792227722 NA Intergenic Intergenic -12180 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-4 chr7 44553616 44553891 + 0.610902792227722 NA intron (NM_001285517, intron 1 of 9) CpG-13068 212 NM_009473 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722 chr1 184860573 184861135 + 0.610902792227722 NA Intergenic Intergenic -15007 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-3 chr13 21778980 21779301 + 0.610902792227722 NA TTS (NM_020034) TTS (NM_020034) 1485 NM_020034 56702 Mm.221314 NM_020034 ENSMUSG00000058773 Hist1h1b H1.5|H1B|H1f5|H1s-3 histone cluster 1, H1b protein-coding unique_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-2 chrX 38189810 38190354 + 0.610902792227722 NA 5' UTR (NM_020256, exon 1 of 2) 5' UTR (NM_020256, exon 1 of 2) 289 NM_001079513 56805 Mm.391248 NM_020256 ENSMUSG00000048047 Zbtb33 AW260253|E130014G12Rik|Kaiso|Znf-kaiso zinc finger and BTB domain containing 33 protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-4 chr17 56183500 56183827 + 0.610902792227722 NA intron (NM_080837, intron 1 of 5) intron (NM_080837, intron 1 of 5) 257 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak1_28_33_-0.505494840299828_4.83471542110042_0.610902792227722 chr1 134062766 134063072 + 0.610902792227722 NA Intergenic Intergenic 16236 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-8 chr8 109705606 109705898 + 0.610902792227722 NA promoter-TSS (NM_029468) promoter-TSS (NM_029468) 206 NM_001167946 75871 Mm.180410 NM_029468 ENSMUSG00000031728 Zfp821 4930566A11Rik|Znf821 zinc finger protein 821 protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-6 chr4 9068233 9068526 + 0.610902792227722 NA Intergenic Intergenic -200914 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-2 chr10 86295559 86295972 + 0.610902792227722 NA intron (NM_001164495, intron 6 of 6) intron (NM_001164495, intron 6 of 6) -4647 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-7 chr8 106530253 106530737 + 0.610902792227722 NA intron (NM_007665, intron 2 of 15) B1_Mur3|SINE|Alu 19643 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_28_33_-0.505494840299828_4.83471542110042_0.610902792227722-3 chr5 32141208 32141677 + 0.610902792227722 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 4970 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_813_701_-0.0963960595875868_9.40712919051077_0.610654918146239 chr9 102717793 102724562 + 0.610654918146239 NA intron (NM_019764, intron 2 of 9) intron (NM_019764, intron 2 of 9) 3373 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_99_98_-0.274112737500546_6.49230025132934_0.61026960991473 chr5 147076920 147078164 + 0.61026960991473 NA promoter-TSS (NM_080795) promoter-TSS (NM_080795) 196 NM_009087 20018 Mm.317557 NM_009087 ENSMUSG00000029642 Polr1d 1110003G10Rik|AC19|RPA16|Rpo1-3 polymerase (RNA) I polypeptide D protein-coding common_peak2_99_98_-0.274112737500546_6.49230025132934_0.61026960991473-2 chr7 126791633 126792417 + 0.61026960991473 NA intron (NM_019674, intron 2 of 8) CpG 339 NM_001360464 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|PP-X|PP4C|Ppx|pp4 protein phosphatase 4, catalytic subunit protein-coding common_peak2_63_66_-0.350159105386465_5.89100963776454_0.610031908571722 chr17 71183685 71184667 + 0.610031908571722 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) 198 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_64_66_-0.327949096822024_5.90211464204676_0.610031908571722-2 chr5 73292796 73293437 + 0.610031908571722 NA intron (NM_023429, intron 1 of 8) CpG 322 NM_001159888 68095 Mm.247039 NM_023429 ENSMUSG00000029152 Ociad1 6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018 OCIA domain containing 1 protein-coding common_peak2_64_66_-0.327949096822024_5.90211464204676_0.610031908571722 chr18 35835941 35836866 + 0.610031908571722 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 6089 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_80_53_0.298494950964145_5.90413497764554_0.610031908571722-2 chr10 128546782 128547687 + 0.610031908571722 NA TTS (NM_018860) TTS (NM_018860) 510 NM_134003 103284 Mm.68289 NM_134003 ENSMUSG00000039810 Zc3h10 AI790326 zinc finger CCCH type containing 10 protein-coding common_peak1_80_53_0.298494950964145_5.90413497764554_0.610031908571722 chr10 68008476 68009394 + 0.610031908571722 NA intron (NM_001359319, intron 6 of 11) intron (NM_001359319, intron 6 of 11) 29365 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak1_63_66_-0.350159105386465_5.89100963776454_0.610031908571722-2 chr16 31663888 31664681 + 0.610031908571722 NA non-coding (NR_045516, exon 1 of 25) non-coding (NR_045516, exon 1 of 25) 349 NM_001252434 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs large MAGUK scaffold protein 1 protein-coding common_peak2_63_66_-0.350159105386465_5.89100963776454_0.610031908571722-2 chr18 62180118 62180873 + 0.610031908571722 NA promoter-TSS (NM_007420) promoter-TSS (NM_007420) 395 NM_001013754 225609 Mm.296917 NM_001013754 ENSMUSG00000054589 Gm9949 EG225609 predicted gene 9949 protein-coding common_peak2_63_66_-0.350159105386465_5.89100963776454_0.610031908571722-3 chr8 69208552 69209452 + 0.610031908571722 NA promoter-TSS (NM_001013379) promoter-TSS (NM_001013379) -44 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak2_63_66_-0.350159105386465_5.89100963776454_0.610031908571722-4 chr8 111337467 111338821 + 0.610031908571722 NA promoter-TSS (NM_029005) promoter-TSS (NM_029005) 61 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak1_63_66_-0.350159105386465_5.89100963776454_0.610031908571722 chr13 24375666 24376385 + 0.610031908571722 NA intron (NM_001284519, intron 2 of 17) intron (NM_001284519, intron 2 of 17) -39097 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_79_53_0.280699481661718_5.89523724299433_0.610031908571722-2 chr5 146221152 146221951 + 0.610031908571722 NA promoter-TSS (NM_001256086) promoter-TSS (NM_001256086) -94 NM_028774 74132 Mm.26696 NM_028774 ENSMUSG00000029634 Rnf6 1200013I08Rik|5730419H05Rik|AA537053 ring finger protein (C3H2C3 type) 6 protein-coding common_peak2_79_53_0.280699481661718_5.89523724299433_0.610031908571722 chr11 98809776 98810896 + 0.610031908571722 NA promoter-TSS (NR_033551) promoter-TSS (NR_033551) -247 NR_033551 100037262 Mm.442062 NR_033551 ENSMUSG00000075576 Gm12359 - predicted gene 12359 ncRNA common_peak1_64_66_-0.327949096822024_5.90211464204676_0.610031908571722 chr1 87180220 87180881 + 0.610031908571722 NA Intergenic Intergenic -2764 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding common_peak1_79_53_0.280699481661718_5.89523724299433_0.610031908571722-3 chr7 45128201 45128746 + 0.610031908571722 NA intron (NM_009438, intron 1 of 7) intron (NM_009438, intron 1 of 7) 272 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding common_peak1_79_53_0.280699481661718_5.89523724299433_0.610031908571722 chr17 32787430 32788233 + 0.610031908571722 NA promoter-TSS (NM_001346705) promoter-TSS (NM_001346705) -284 NM_001346705 208292 Mm.38813 NM_172458 ENSMUSG00000024298 Zfp871 4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006 zinc finger protein 871 protein-coding common_peak2_75_76_-0.304678065722999_6.1144475078334_0.609973236154633 chr17 75109873 75110505 + 0.609973236154633 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -68592 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_75_76_-0.304678065722999_6.1144475078334_0.609973236154633-2 chr2 9481985 9483380 + 0.609973236154633 NA Intergenic Intergenic 293167 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak2_74_76_-0.323652076315138_6.10496050253733_0.609973236154633-4 chr5 149183412 149184198 + 0.609973236154633 NA promoter-TSS (NM_001286825) promoter-TSS (NM_001286825) -755 NM_001115153 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak2_74_76_-0.323652076315138_6.10496050253733_0.609973236154633-3 chr3 96635496 96636291 + 0.609973236154633 NA promoter-TSS (NM_001162388) promoter-TSS (NM_001162388) 46 NM_001162388 18632 Mm.20901 NM_011069 ENSMUSG00000028102 Pex11b PEX11beta|Pex11pbeta peroxisomal biogenesis factor 11 beta protein-coding common_peak2_75_76_-0.304678065722999_6.1144475078334_0.609973236154633-3 chr8 45610261 45611382 + 0.609973236154633 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -16930 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_74_76_-0.323652076315138_6.10496050253733_0.609973236154633-5 chr7 79273270 79273852 + 0.609973236154633 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 295 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_75_76_-0.304678065722999_6.1144475078334_0.609973236154633 chr7 145107836 145108949 + 0.609973236154633 NA Intergenic MIRb|SINE|MIR 99727 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak1_74_76_-0.323652076315138_6.10496050253733_0.609973236154633 chr5 149183453 149184164 + 0.609973236154633 NA promoter-TSS (NM_001286825) promoter-TSS (NM_001286825) -752 NM_001115153 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak2_74_76_-0.323652076315138_6.10496050253733_0.609973236154633-2 chr19 3282598 3283317 + 0.609973236154633 NA promoter-TSS (NM_009212) promoter-TSS (NM_009212) 53 NM_009212 20589 Mm.3179 NM_009212 ENSMUSG00000024831 Ighmbp2 AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma immunoglobulin mu binding protein 2 protein-coding common_peak2_74_76_-0.323652076315138_6.10496050253733_0.609973236154633 chr18 68300455 68300961 + 0.609973236154633 NA promoter-TSS (NM_153794) promoter-TSS (NM_153794) 288 NM_001361003 67897 Mm.27544 NM_026440 ENSMUSG00000009535 Rnmt 2610002P10Rik|AI848273|Rg7mt1|mKIAA0398 RNA (guanine-7-) methyltransferase protein-coding common_peak2_92_62_0.27400521828032_6.11428253264008_0.609973236154621 chr1 75192247 75193122 + 0.609973236154621 NA promoter-TSS (NM_001288612) promoter-TSS (NM_001288612) 524 NR_051998 52231 Mm.259326 NM_026187 ENSMUSG00000026199 Ankzf1 1300008P06Rik|2810025E10Rik|D1Ertd161e ankyrin repeat and zinc finger domain containing 1 protein-coding common_peak1_92_62_0.27400521828032_6.11428253264008_0.609973236154621 chr19 17874795 17875562 + 0.609973236154621 NA Intergenic Intergenic -37546 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding common_peak2_127_123_-0.245321204888811_6.83153570794247_0.609929000337616-3 chr5 34336415 34337312 + 0.609929000337616 NA promoter-TSS (NM_001304270) promoter-TSS (NM_001304270) -69 NM_001304270 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak2_127_123_-0.245321204888811_6.83153570794247_0.609929000337616-2 chr3 109123128 109124459 + 0.609929000337616 NA intron (NM_172685, intron 1 of 9) intron (NM_172685, intron 1 of 9) 644 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_128_123_-0.234173157523232_6.83710973162526_0.609929000337616 chr9 6645541 6647064 + 0.609929000337616 NA Intergenic Intergenic -379755 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_127_123_-0.245321204888811_6.83153570794247_0.609929000337616 chr11 97804264 97806133 + 0.609929000337616 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 5633 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_298_270_-0.157907568466788_8.00319525712048_0.609750276241133 chr15 58932101 58934514 + 0.609750276241133 NA promoter-TSS (NM_023172) promoter-TSS (NM_023172) 423 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak2_184_131_0.192113561306378_7.14045090001164_0.609298999020517 chr15 27404989 27406551 + 0.609298999020517 NA Intergenic Intergenic -60907 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_203_145_0.1867319415374_7.28319052964872_0.609180598536215 chr16 92609608 92611525 + 0.609180598536215 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 86763 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_105_72_0.248890516816599_6.31426981728832_0.608771260156328 chr10 84397411 84398162 + 0.608771260156328 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 42685 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_105_72_0.248890516816599_6.31426981728832_0.608771260156328 chr7 144043892 144045188 + 0.608771260156328 NA Intergenic Intergenic 35286 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA unique_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697-3 chr3 122202592 122203564 + 0.60830192689697 NA Intergenic Intergenic -42479 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak2_69_45_0.320739056915546_5.68393148451479_0.60830192689697 chr16 31526562 31527537 + 0.60830192689697 NA Intergenic Intergenic -91084 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak1_68_45_0.300126947966696_5.67362543004036_0.60830192689697-2 chr3 116807738 116808312 + 0.60830192689697 NA intron (NM_001362367, intron 1 of 27) CpG 141 NM_001362367 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding common_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697 chr16 31947729 31948472 + 0.60830192689697 NA promoter-TSS (NM_026554) promoter-TSS (NM_026554) 421 NR_027897 106264 Mm.347369 NM_025320 ENSMUSG00000107002 0610012G03Rik AI839730 RIKEN cDNA 0610012G03 gene ncRNA common_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697-5 chr9 88719488 88720299 + 0.60830192689697 NA promoter-TSS (NM_001128601) promoter-TSS (NM_001128601) -95 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding common_peak1_68_45_0.300126947966696_5.67362543004036_0.60830192689697 chr3 104218782 104219924 + 0.60830192689697 NA intron (NM_133853, intron 1 of 21) intron (NM_133853, intron 1 of 21) 1053 NM_133853 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697-4 chr4 141444723 141445194 + 0.60830192689697 NA intron (NM_009541, intron 1 of 15) CpG 285 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697-3 chr2 13406467 13407291 + 0.60830192689697 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 84997 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697 chr1 138535960 138536889 + 0.60830192689697 NA intron (NM_021605, intron 3 of 9) intron (NM_021605, intron 3 of 9) 83333 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697-2 chr2 163353994 163354523 + 0.60830192689697 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 43715 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_69_45_0.320739056915546_5.68393148451479_0.60830192689697-2 chr17 72966136 72967053 + 0.60830192689697 NA Intergenic Intergenic 48289 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_54_57_-0.359148693776633_5.67840664823926_0.608301926896957-2 chr5 89277165 89277686 + 0.608301926896957 NA Intergenic Intergenic 180473 NM_008096 14473 Mm.196595 NM_008096 ENSMUSG00000035540 Gc DBP|VDB vitamin D binding protein protein-coding common_peak1_54_57_-0.359148693776633_5.67840664823926_0.608301926896957-3 chr5 109556689 109557786 + 0.608301926896957 NA intron (NM_001310694, intron 2 of 7) intron (NM_001310694, intron 2 of 7) 1756 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak2_54_57_-0.359148693776633_5.67840664823926_0.608301926896957-3 chr8 115904546 115905371 + 0.608301926896957 NA Intergenic MTEa|LTR|ERVL-MaLR -198064 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_54_57_-0.359148693776633_5.67840664823926_0.608301926896957-2 chr8 45003134 45004074 + 0.608301926896957 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 53396 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_54_57_-0.359148693776633_5.67840664823926_0.608301926896957 chr6 145211390 145212031 + 0.608301926896957 NA promoter-TSS (NM_177222) promoter-TSS (NM_177222) 563 NM_001362057 67636 Mm.486359 NM_133688 ENSMUSG00000040370 Etfrf1 4930469P12Rik|AL022899|Ghiso|Lyrm5 electron transfer flavoprotein regulatory factor 1 protein-coding common_peak1_54_57_-0.359148693776633_5.67840664823926_0.608301926896957 chr10 80161148 80161726 + 0.608301926896957 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -6402 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_135_94_0.225865289859016_6.68278825326046_0.607506474041115 chr1 52231586 52233131 + 0.607506474041115 NA intron (NM_001081081, intron 1 of 17) CpG 874 NM_001081081 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak2_135_94_0.225865289859016_6.68278825326046_0.607506474041115 chr3 84814649 84815907 + 0.607506474041115 NA promoter-TSS (NM_001177773) promoter-TSS (NM_001177773) -299 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_334_245_0.144585451908538_8.01480723129351_0.607359540986581 chr2 167541935 167544785 + 0.607359540986581 NA TTS (NM_011427) TTS (NM_011427) 5165 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_161_152_-0.211060369138282_7.15185765812351_0.607124477653458 chr13 90088808 90090748 + 0.607124477653458 NA promoter-TSS (NM_028012) promoter-TSS (NM_028012) 111 NM_025335 66074 Mm.241387 NM_025335 ENSMUSG00000012422 Tmem167 0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a transmembrane protein 167 protein-coding common_peak1_161_152_-0.211060369138282_7.15185765812351_0.607124477653458 chr7 127776315 127778105 + 0.607124477653458 NA promoter-TSS (NM_178029) promoter-TSS (NM_178029) -179 NM_178029 233904 Mm.435494 NM_010940 ENSMUSG00000042308 Setd1a BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1 SET domain containing 1A protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-2 chr15 84232203 84232487 + 0.607095980551316 NA intron (NM_133167, intron 1 of 12) intron (NM_133167, intron 1 of 12) 302 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-6 chr11 88555767 88556296 + 0.607095980551316 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -63220 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-8 chr12 104415126 104415446 + 0.607095980551316 NA TTS (NM_009252) TTS (NM_009252) 8578 NM_009252 20716 Mm.482074 NM_009252 ENSMUSG00000021091 Serpina3n Spi2-2|Spi2.2|Spi2/eb.4 serine (or cysteine) peptidase inhibitor, clade A, member 3N protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-13 chr3 90514880 90515270 + 0.607095980551316 NA promoter-TSS (NM_011309) promoter-TSS (NM_011309) 640 NM_009113 20196 Mm.6523 NM_009113 ENSMUSG00000042312 S100a13 - S100 calcium binding protein A13 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-11 chr2 129183750 129184263 + 0.607095980551316 NA Intergenic Intergenic -3333 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 - expressed sequence AI847159 ncRNA common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-10 chr15 98952236 98952576 + 0.607095980551316 NA intron (NM_011653, intron 1 of 3) intron (NM_011653, intron 1 of 3) 1095 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-16 chr5 66586020 66586344 + 0.607095980551316 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 32635 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-3 chr11 8469956 8470524 + 0.607095980551316 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 194295 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-7 chr5 135995093 135995312 + 0.607095980551316 NA intron (NM_001256096, intron 1 of 10) intron (NM_001256096, intron 1 of 10) 402 NM_001256098 74198 Mm.275574 NM_023742 ENSMUSG00000004947 Dtx2 2610524D08Rik|AA408415|AU022494|Deltex2 deltex 2, E3 ubiquitin ligase protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-9 chr16 21339732 21339993 + 0.607095980551316 NA Intergenic Intergenic -6506 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-6 chr4 117865692 117866110 + 0.607095980551316 NA intron (NM_001355175, intron 11 of 12) MIR|SINE|MIR 6569 NM_001034876 381546 Mm.440118 NM_001034876 ENSMUSG00000078588 Ccdc24 Gm1028 coiled-coil domain containing 24 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-2 chr10 16498970 16499257 + 0.607095980551316 NA Intergenic Intergenic 596669 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-5 chr11 35982490 35982884 + 0.607095980551316 NA Intergenic Intergenic -2598 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-20 chr9 7677513 7678257 + 0.607095980551316 NA intron (NR_126562, intron 1 of 3) intron (NR_126562, intron 1 of 3) -14205 NM_010810 17393 Mm.4825 NM_010810 ENSMUSG00000018623 Mmp7 MAT|MMP-7 matrix metallopeptidase 7 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-21 chr8 94666067 94666499 + 0.607095980551316 NA promoter-TSS (NM_024191) promoter-TSS (NM_024191) -317 NM_024191 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-17 chr8 34762873 34763450 + 0.607095980551316 NA Intergenic B1_Mur4|SINE|Alu -44449 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-18 chr7 28378901 28379169 + 0.607095980551316 NA intron (NM_011756, intron 1 of 1) CpG 193 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316 chr13 51793217 51793464 + 0.607095980551316 NA intron (NM_013660, intron 1 of 15) CpG 407 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-18 chr5 149372779 149373191 + 0.607095980551316 NA Intergenic Intergenic -38764 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-2 chr11 50290545 50290789 + 0.607095980551316 NA intron (NM_175334, intron 1 of 4) intron (NM_175334, intron 1 of 4) 1669 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-10 chr18 34887084 34887402 + 0.607095980551316 NA Intergenic Intergenic 26036 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-3 chr11 59731748 59732196 + 0.607095980551316 NA intron (NR_045476, intron 3 of 5) intron (NR_045476, intron 3 of 5) 8182 NR_045476 69320 Mm.443242 NR_045476 ENSMUSG00000086330 1700007J10Rik 4930573L17Rik RIKEN cDNA 1700007J10 gene ncRNA common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-9 chr16 92565942 92566446 + 0.607095980551316 NA Intergenic Intergenic 68047 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-8 chr13 51327083 51327502 + 0.607095980551316 NA Intergenic Intergenic -81326 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-2 chr6 121165939 121166214 + 0.607095980551316 NA Intergenic Intergenic -17591 NR_130903 74043 Mm.491240 NM_028730 ENSMUSG00000067825 Pex26 4632428M11Rik peroxisomal biogenesis factor 26 protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-3 chr17 6007512 6007740 + 0.607095980551316 NA promoter-TSS (NM_001290698) promoter-TSS (NM_001290698) 46 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-19 chr9 51105970 51106190 + 0.607095980551316 NA Intergenic Intergenic -2435 NR_029655 723849 NR_029655 ENSMUSG00000065492 Mir34b Mirn34b|mir-34b|mmu-mir-34b microRNA 34b ncRNA common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-2 chr1 184782612 184783009 + 0.607095980551316 NA Intergenic Intergenic 28490 NM_001290273 66112 Mm.272457 NM_001081361 ENSMUSG00000026621 Marc1 1300013F15Rik|Mosc1 mitochondrial amidoxime reducing component 1 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-14 chr3 121682513 121682822 + 0.607095980551316 NA intron (NM_001033814, intron 5 of 5) intron (NM_001033814, intron 5 of 5) 11904 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-2 chr11 6273717 6274234 + 0.607095980551316 NA intron (NM_134020, intron 3 of 4) intron (NM_134020, intron 3 of 4) 862 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-6 chr13 36535625 36536106 + 0.607095980551316 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 198612 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-14 chr5 117119526 117119778 + 0.607095980551316 NA promoter-TSS (NM_001199685) promoter-TSS (NM_001199685) -477 NM_001199685 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-13 chr3 40800418 40800754 + 0.607095980551316 NA intron (NR_045576, intron 1 of 15) CpG 635 NR_045576 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo like kinase 4 protein-coding common_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316-6 chr9 47284240 47284553 + 0.607095980551316 NA Intergenic Intergenic -245774 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-11 chr2 152678684 152679049 + 0.607095980551316 NA intron (NM_010376, intron 2 of 11) intron (NM_010376, intron 2 of 11) -8282 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-4 chr12 112588206 112588417 + 0.607095980551316 NA promoter-TSS (NM_198411) promoter-TSS (NM_198411) -473 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316 chr17 36001870 36002229 + 0.607095980551316 NA intron (NR_015618, intron 1 of 1) MER88|LTR|ERVL 7545 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak1_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-4 chr5 123720758 123720966 + 0.607095980551316 NA exon (NM_027494, exon 1 of 14) exon (NM_027494, exon 1 of 14) 182 NM_027494 70650 Mm.279427 NM_027494 ENSMUSG00000029427 Zcchc8 5730565F05Rik zinc finger, CCHC domain containing 8 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-3 chr11 40402637 40402862 + 0.607095980551316 NA Intergenic Intergenic 289933 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-12 chr3 52677713 52678228 + 0.607095980551316 NA Intergenic MLT1G|LTR|ERVL-MaLR -61754 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-12 chr3 27704804 27705305 + 0.607095980551316 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 5398 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding unique_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-4 chr7 126649355 126649610 + 0.607095980551316 NA intron (NM_029339, intron 1 of 9) CpG 173 NM_029339 75565 Mm.45686 NM_029339 ENSMUSG00000030714 Sgf29 1700023O11Rik|9530025I05Rik|Ccdc101 SAGA complex associated factor 29 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-4 chr11 59601594 59601914 + 0.607095980551316 NA Intergenic Intergenic -11212 NM_001011740 257886 Mm.457883 NM_001011740 ENSMUSG00000044061 Olfr225 MOR256-51 olfactory receptor 225 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316 chr1 74057906 74058406 + 0.607095980551316 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 66291 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-4 chr11 8460304 8460637 + 0.607095980551316 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 204065 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316-2 chr14 31768275 31768522 + 0.607095980551316 NA intron (NM_001024604, intron 2 of 27) intron (NM_001024604, intron 2 of 27) 62017 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-11 chr18 4515040 4515368 + 0.607095980551316 NA Intergenic Intergenic -119725 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-19 chr8 122988776 122989323 + 0.607095980551316 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 53235 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-16 chr7 66364585 66364872 + 0.607095980551316 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 16996 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-10 chrX 20961725 20961959 + 0.607095980551316 NA promoter-TSS (NR_027446) promoter-TSS (NR_027446) 136 NM_013840 22294 Mm.34779 NM_013840 ENSMUSG00000001134 Uxt 0910002B17Rik ubiquitously expressed transcript protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-14 chr7 120843063 120843482 + 0.607095980551316 NA promoter-TSS (NM_001267710) promoter-TSS (NM_001267710) -328 NM_001267710 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-3 chr10 111164319 111164583 + 0.607095980551316 NA promoter-TSS (NM_175489) promoter-TSS (NM_175489) -351 NM_001003717 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-4 chr11 5896022 5896578 + 0.607095980551316 NA TTS (NM_022879) TTS (NM_022879) 2482 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-7 chr12 71016047 71016371 + 0.607095980551316 NA promoter-TSS (NR_045055) promoter-TSS (NR_045055) 242 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316-3 chr4 84100641 84100905 + 0.607095980551316 NA Intergenic Intergenic -55894 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-13 chr3 105201879 105202201 + 0.607095980551316 NA Intergenic Intergenic 135196 NM_029228 75269 Mm.307994 NM_029228 ENSMUSG00000051788 4930564D02Rik - RIKEN cDNA 4930564D02 gene protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-8 chr15 98180443 98180655 + 0.607095980551316 NA Intergenic Intergenic 12743 NM_177716 239650 Mm.54140 NM_177716 ENSMUSG00000029875 Ccdc184 5630400A08|AI836003 coiled-coil domain containing 184 protein-coding common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-8 chr7 58676144 58676379 + 0.607095980551316 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 18059 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-3 chr7 90337037 90337413 + 0.607095980551316 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 34870 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-9 chr15 85267192 85267575 + 0.607095980551316 NA intron (NM_010180, intron 16 of 16) intron (NM_010180, intron 16 of 16) 61375 NM_010180 14114 Mm.297992 NM_010180 ENSMUSG00000006369 Fbln1 - fibulin 1 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316 chr1 40448828 40449299 + 0.607095980551316 NA TTS (NM_010743) TTS (NM_010743) 9434 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316 chr1 90519018 90519398 + 0.607095980551316 NA Intergenic Intergenic -84217 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak1_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-3 chr17 10318747 10318977 + 0.607095980551316 NA exon (NM_001159517, exon 1 of 8) exon (NM_001159517, exon 1 of 8) 499 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-4 chr11 69383078 69383492 + 0.607095980551316 NA Intergenic B1_Mur1|SINE|Alu 12061 NM_001045525 327951 Mm.415669 NM_001045525 ENSMUSG00000044795 Cyb5d1 Gm740 cytochrome b5 domain containing 1 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-10 chr2 35230536 35230928 + 0.607095980551316 NA Intergenic Intergenic -25627 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-5 chr12 13098744 13099079 + 0.607095980551316 NA Intergenic Intergenic 150263 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-8 chr15 6709453 6709793 + 0.607095980551316 NA intron (NM_030168, intron 2 of 37) intron (NM_030168, intron 2 of 37) 1242 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-6 chr11 116615030 116615422 + 0.607095980551316 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 9026 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding unique_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316-2 chr18 60480756 60481015 + 0.607095980551316 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 21098 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding unique_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-6 chr8 12794055 12794469 + 0.607095980551316 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 37246 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak1_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-2 chr15 99849533 99849736 + 0.607095980551316 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 25822 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316-5 chr7 113512920 113513299 + 0.607095980551316 NA promoter-TSS (NM_027379) promoter-TSS (NM_027379) -725 NM_001285831 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-12 chr2 131932485 131932874 + 0.607095980551316 NA intron (NM_001278256, intron 3 of 3) intron (NM_001278256, intron 3 of 3) -18182 NM_001278257 26434 Mm.180750 NM_023043 ENSMUSG00000027338 Prnd AI450264|Dpl|PrPLP|doppel prion like protein doppel protein-coding common_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316-4 chr4 129231658 129231951 + 0.607095980551316 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) -3893 NM_001285866 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-8 chr7 87246667 87246948 + 0.607095980551316 NA 5' UTR (NM_001285835, exon 1 of 18) 5' UTR (NM_001285835, exon 1 of 18) 158 NM_001285833 50490 Mm.31748 NM_015760 ENSMUSG00000030562 Nox4 AI648021 NADPH oxidase 4 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-13 chr5 38479927 38480133 + 0.607095980551316 NA intron (NM_145559, intron 2 of 10) intron (NM_145559, intron 2 of 10) 276 NM_001102414 117591 Mm.260137 NM_145559 ENSMUSG00000005107 Slc2a9 Glut9|SLC2A9B|SLC2a9A solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-17 chr5 136084023 136084314 + 0.607095980551316 NA exon (NM_133914, exon 1 of 21) exon (NM_133914, exon 1 of 21) 252 NM_001039103 54153 Mm.290655 NM_133914 ENSMUSG00000004952 Rasa4 AA793972|AW112107|BB079060|CAPRI|GAPL RAS p21 protein activator 4 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-3 chr10 7792985 7793244 + 0.607095980551316 NA intron (NM_026141, intron 1 of 12) intron (NM_026141, intron 1 of 12) 220 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-17 chr9 122177965 122178236 + 0.607095980551316 NA intron (NM_001271873, intron 12 of 12) intron (NM_001271873, intron 12 of 12) 60641 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-22 chr8 111450370 111450694 + 0.607095980551316 NA TTS (NR_105819) TTS (NR_105819) 332 NR_105819 common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-16 chr3 133091042 133091365 + 0.607095980551316 NA promoter-TSS (NM_027927) promoter-TSS (NM_027927) 622 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-4 chr2 167661186 167661495 + 0.607095980551316 NA intron (NM_145538, intron 1 of 5) CpG 204 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316 chr1 185362500 185362776 + 0.607095980551316 NA promoter-TSS (NM_029735) promoter-TSS (NM_029735) -406 NM_029735 107508 Mm.154511 NM_029735 ENSMUSG00000026615 Eprs 2410081F06Rik|3010002K18Rik|C79379|Qprs glutamyl-prolyl-tRNA synthetase protein-coding unique_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-5 chr7 139260744 139261070 + 0.607095980551316 NA intron (NM_001098636, intron 2 of 2) intron (NM_001098636, intron 2 of 2) 12425 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-15 chr4 44168433 44168820 + 0.607095980551316 NA promoter-TSS (NM_001355181) promoter-TSS (NM_001355181) -343 NM_001038993 73469 Mm.262859 NM_175201 ENSMUSG00000035696 Rnf38 1700065B19Rik|2610202O07Rik|AA673263|Oip1 ring finger protein 38 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-19 chr7 28926143 28926538 + 0.607095980551316 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 35992 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316 chr6 42491496 42492045 + 0.607095980551316 NA Intergenic Intergenic -4556 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding unique_peak1_16_21_-0.642545781727601_4.1381587277735_0.607095980551316 chr1 82796073 82796288 + 0.607095980551316 NA Intergenic Intergenic -27724 NM_025453 66261 Mm.46325 NM_025453 ENSMUSG00000026149 Tm4sf20 1810018L02Rik transmembrane 4 L six family member 20 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-9 chr13 42053133 42053473 + 0.607095980551316 NA intron (NM_007772, intron 1 of 8) intron (NM_007772, intron 1 of 8) 1282 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-9 chr8 47931295 47931523 + 0.607095980551316 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 59142 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-12 chr3 52555386 52555825 + 0.607095980551316 NA Intergenic Intergenic 38641 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-6 chr12 69361877 69362107 + 0.607095980551316 NA Intergenic Intergenic -4816 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-7 chr14 46832195 46832469 + 0.607095980551316 NA exon (NM_001360455, exon 1 of 2) exon (NM_001360455, exon 1 of 2) 198 NM_001360455 68755 Mm.343809 NM_026832 ENSMUSG00000055128 Cgrrf1 1110038G02Rik|1810009H17Rik|CGR19 cell growth regulator with ring finger domain 1 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-17 chr6 83033815 83034020 + 0.607095980551316 NA promoter-TSS (NM_001291799) promoter-TSS (NM_001291799) -307 NM_013586 16950 Mm.380433 NM_013586 ENSMUSG00000000693 Loxl3 Lor2|Loxl2 lysyl oxidase-like 3 protein-coding common_peak1_16_21_-0.642545781727601_4.1381587277735_0.607095980551316 chr11 5893925 5894349 + 0.607095980551316 NA Intergenic Intergenic 4645 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-2 chr1 132009727 132010080 + 0.607095980551316 NA intron (NM_007923, intron 1 of 4) B1_Mur4|SINE|Alu 2298 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-18 chr8 64545934 64546317 + 0.607095980551316 NA Intergenic Intergenic -31684 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-16 chr8 71315031 71315323 + 0.607095980551316 NA exon (NM_001142323, exon 3 of 39) exon (NM_001142323, exon 3 of 39) 42463 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak2_24_14_0.462463246117033_4.13812221866704_0.607095980551316 chr15 97780687 97781004 + 0.607095980551316 NA Intergenic Intergenic -3520 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-5 chr11 80491250 80491520 + 0.607095980551316 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 14362 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316 chr14 51932932 51933174 + 0.607095980551316 NA Intergenic Intergenic -10280 NM_001011687 497071 Mm.378602 NM_001011687 ENSMUSG00000068392 Rnase13 - ribonuclease, RNase A family, 13 (non-active) protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-15 chr3 131364383 131364593 + 0.607095980551316 NA Intergenic Intergenic -19565 NM_028943 74442 Mm.273360 NM_028943 ENSMUSG00000050931 Sgms2 4933405A16Rik|5133401H06Rik|AI854299 sphingomyelin synthase 2 protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-7 chr13 4191198 4191627 + 0.607095980551316 NA intron (NM_013778, intron 1 of 8) intron (NM_013778, intron 1 of 8) 225 NM_013778 27384 Mm.27447 NM_013778 ENSMUSG00000021213 Akr1c13 mKIAA4014 aldo-keto reductase family 1, member C13 protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-5 chr3 20057868 20058100 + 0.607095980551316 NA promoter-TSS (NR_105047) promoter-TSS (NR_105047) 173 NR_105046 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding unique_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-15 chr6 128298516 128298889 + 0.607095980551316 NA intron (NM_001080979, intron 1 of 10) intron (NM_001080979, intron 1 of 10) 2111 NM_001080979 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-14 chr3 144319307 144319552 + 0.607095980551316 NA Intergenic Intergenic -114174 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-5 chr11 119857676 119858089 + 0.607095980551316 NA exon (NM_001306081, exon 19 of 33) exon (NM_001306081, exon 19 of 33) -23517 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-15 chr7 144021036 144021408 + 0.607095980551316 NA Intergenic ID4_|SINE|ID 11968 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-7 chr6 114920328 114920560 + 0.607095980551316 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 1377 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-10 chr19 42080492 42080830 + 0.607095980551316 NA intron (NM_198108, intron 1 of 4) intron (NM_198108, intron 1 of 4) 5709 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding common_peak1_25_14_0.518647578846594_4.16621438503182_0.607095980551316-7 chr14 70330327 70330700 + 0.607095980551316 NA intron (NM_144808, intron 2 of 9) intron (NM_144808, intron 2 of 9) 17920 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-11 chr2 80638921 80639269 + 0.607095980551316 NA promoter-TSS (NM_001190179) promoter-TSS (NM_001190179) -169 NM_001190179 69482 Mm.29200 NM_027091 ENSMUSG00000026999 Nup35 2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44 nucleoporin 35 protein-coding unique_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316-20 chr7 141123306 141123646 + 0.607095980551316 NA Intergenic Intergenic -5670 NM_178381 71345 Mm.235813 NM_178381 ENSMUSG00000054662 Ano9 5430425C04Rik|Tmem16j|Tp53i5|Trp53i5 anoctamin 9 protein-coding common_peak2_25_14_0.518647578846594_4.16621438503182_0.607095980551316-6 chr4 32466372 32466620 + 0.607095980551316 NA intron (NM_001109661, intron 1 of 4) intron (NM_001109661, intron 1 of 4) 49061 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_24_14_0.462463246117033_4.13812221866704_0.607095980551316 chr1 138328572 138328836 + 0.607095980551316 NA Intergenic Intergenic 54966 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_16_21_-0.642545781727601_4.1381587277735_0.607095980551316-5 chr4 81077456 81077822 + 0.607095980551316 NA Intergenic Intergenic 166953 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding common_peak2_101_99_-0.260244709784063_6.51373383488269_0.606862525596557 chr2 34802051 34802930 + 0.606862525596557 NA Intergenic CpG -2578 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak2_100_99_-0.274358290517311_6.50667704451607_0.606862525596557 chr7 74012281 74013654 + 0.606862525596557 NA intron (NM_009181, intron 1 of 5) CpG 715 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_197_183_-0.189770328578287_7.42867679176787_0.606759721263541 chr10 17722590 17724787 + 0.606759721263541 NA intron (NM_010828, intron 1 of 1) CpG 460 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_168_119_0.200035749937424_7.00690847057723_0.60632851424623-2 chr9 108516503 108518011 + 0.60632851424623 NA intron (NM_175143, intron 1 of 9) CpG 170 NM_175143 69232 Mm.335449 NM_175143 ENSMUSG00000006673 Qrich1 2610028H07Rik|b2b2404Clo glutamine-rich 1 protein-coding common_peak2_168_119_0.200035749937424_7.00690847057723_0.60632851424623 chr15 38077262 38078792 + 0.60632851424623 NA intron (NM_001112721, intron 1 of 58) CpG 827 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding common_peak1_168_119_0.200035749937424_7.00690847057723_0.60632851424623 chr15 102203623 102204903 + 0.60632851424623 NA promoter-TSS (NM_001289695) promoter-TSS (NM_001289695) 263 NM_001358674 68744 Mm.352945 NM_153194 ENSMUSG00000046897 Zfp740 1110034O07Rik|AW548228|Znf740 zinc finger protein 740 protein-coding common_peak1_145_138_-0.221580616730825_7.0081507643581_0.60632851424623 chr11 104440643 104442267 + 0.60632851424623 NA intron (NM_001359634, intron 2 of 14) intron (NM_001359634, intron 2 of 14) 836 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_93_63_0.26660632372881_6.13330316186441_0.605544847524802 chr1 58029937 58030829 + 0.605544847524802 NA intron (NM_009676, intron 1 of 34) intron (NM_009676, intron 1 of 34) 414 NM_009676 11761 Mm.26787 NM_009676 ENSMUSG00000063558 Aox1 AI196512|AI255253|Ao|Aox-1|Aox-2|Aox2|Moro|Ro aldehyde oxidase 1 protein-coding common_peak2_76_77_-0.30456776669106_6.13311833551672_0.605544847524802-3 chr9 50767563 50768779 + 0.605544847524802 NA promoter-TSS (NM_198675) promoter-TSS (NM_198675) 13 NM_001361108 68721 Mm.171374 NM_023483 ENSMUSG00000037971 1110032A03Rik 4930500N06Rik|c11orf1 RIKEN cDNA 1110032A03 gene protein-coding common_peak1_76_77_-0.30456776669106_6.13311833551672_0.605544847524802 chr1 6278400 6279565 + 0.605544847524802 NA Intergenic MLT1H-int|LTR|ERVL-MaLR 64320 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak1_76_77_-0.30456776669106_6.13311833551672_0.605544847524802-2 chr1 161035201 161036076 + 0.605544847524802 NA promoter-TSS (NR_151478) promoter-TSS (NR_151478) 722 NR_153812 14455 Mm.270065 NR_002840 ENSMUSG00000053332 Gas5 Gas-5|Mir5117|Snhg2 growth arrest specific 5 ncRNA common_peak2_76_77_-0.30456776669106_6.13311833551672_0.605544847524802-2 chr17 26561046 26562135 + 0.605544847524802 NA promoter-TSS (NM_026170) promoter-TSS (NM_026170) 78 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_76_77_-0.30456776669106_6.13311833551672_0.605544847524802 chr15 77921798 77922606 + 0.605544847524802 NA intron (NM_019913, intron 3 of 3) PB1D11|SINE|Alu 6792 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_93_63_0.26660632372881_6.13330316186441_0.605544847524802-2 chr15 83349234 83350174 + 0.605544847524802 NA intron (NM_001357756, intron 1 of 15) intron (NM_001357756, intron 1 of 15) 543 NM_001357756 66251 Mm.258910 NM_025445 ENSMUSG00000054277 Arfgap3 0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1 ADP-ribosylation factor GTPase activating protein 3 protein-coding common_peak2_179_168_-0.203621248002089_7.29906881228114_0.605261724020658 chr8 31373554 31375738 + 0.605261724020658 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 6897 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_107_73_0.256038505697965_6.33747261847793_0.604937194445238 chr15 102325980 102326658 + 0.604937194445238 NA intron (NM_027044, intron 1 of 5) CpG 203 NM_027044 56612 Mm.158264 NM_020031 ENSMUSG00000001289 Pfdn5 1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1 prefoldin 5 protein-coding common_peak1_107_73_0.256038505697965_6.33747261847793_0.604937194445238 chr8 91800804 91801928 + 0.604937194445238 NA 5' UTR (NM_008393, exon 1 of 4) 5' UTR (NM_008393, exon 1 of 4) 288 NM_001253822 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding common_peak2_88_88_-0.28742620456647_6.33202032868316_0.604937194445238 chr16 13671513 13672659 + 0.604937194445238 NA intron (NM_001177552, intron 1 of 5) CpG 228 NM_025653 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding common_peak1_106_73_0.242712671400208_6.33080970132905_0.604937194445238 chr15 94589289 94589845 + 0.604937194445238 NA intron (NM_008971, intron 1 of 8) CpG 257 NM_008971 19230 Mm.490250 NM_008971 ENSMUSG00000022451 Twf1 A6|Ptk9|twinfilin twinfilin actin binding protein 1 protein-coding common_peak1_81_54_0.289599854075778_5.92615964056255_0.604904474110885 chr9 120739453 120740325 + 0.604904474110885 NA Intergenic Intergenic 162558 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA common_peak2_81_54_0.289599854075778_5.92615964056255_0.604904474110885 chr4 109201421 109202451 + 0.604904474110885 NA intron (NM_001346502, intron 1 of 23) CpG 336 NM_133885 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak1_65_67_-0.327451836425825_5.92373692303743_0.604904474110885 chr11 4160158 4161111 + 0.604904474110885 NA promoter-TSS (NM_001164620) promoter-TSS (NM_001164620) 280 NM_026175 67465 Mm.156914 NM_026175 ENSMUSG00000002129 Sf3a1 1200014H24Rik|5930416L09Rik|AI159724 splicing factor 3a, subunit 1 protein-coding common_peak2_65_67_-0.327451836425825_5.92373692303743_0.604904474110885 chr1 34842568 34843357 + 0.604904474110885 NA promoter-TSS (NM_001160235) promoter-TSS (NM_001160235) 88 NM_174997 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b Mani|mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak2_237_218_-0.177407111837081_7.68608350368263_0.604786415840375 chr18 61952540 61955043 + 0.604786415840375 NA intron (NM_172628, intron 1 of 16) MER81|DNA|hAT-Blackjack 716 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-8 chr9 69333563 69333917 + 0.604689589251113 NA intron (NM_001289916, intron 1 of 9) intron (NM_001289916, intron 1 of 9) 30507 NR_136934 102642202 Mm.415363 NR_136934 ENSMUSG00000086648 Gm15511 - predicted gene 15511 ncRNA common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-5 chr11 119943146 119943547 + 0.604689589251113 NA intron (NM_001037754, intron 1 of 13) CpG 254 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak2_32_19_0.445137889510396_4.54449703964256_0.604689589251113 chr1 170175915 170176224 + 0.604689589251113 NA Intergenic Intergenic -1105 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-3 chr15 97913402 97913808 + 0.604689589251113 NA Intergenic Intergenic -5309 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-4 chr17 81009220 81009681 + 0.604689589251113 NA Intergenic Intergenic 55635 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-10 chr6 108459738 108460081 + 0.604689589251113 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -29834 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-7 chr8 14911765 14912043 + 0.604689589251113 NA intron (NM_001037736, intron 1 of 27) intron (NM_001037736, intron 1 of 27) 241 NM_001037736 234094 Mm.240298 NM_172751 ENSMUSG00000071176 Arhgef10 6430549H08Rik|mKIAA0294 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding unique_peak2_32_19_0.445137889510396_4.54449703964256_0.604689589251113 chr11 88166238 88166646 + 0.604689589251113 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -3123 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-5 chr5 91104176 91104799 + 0.604689589251113 NA Intergenic Intergenic 29870 NM_007950 13874 Mm.4791 NM_007950 ENSMUSG00000029377 Ereg EPR epiregulin protein-coding common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-4 chr13 115101156 115101674 + 0.604689589251113 NA intron (NM_001033228, intron 1 of 28) intron (NM_001033228, intron 1 of 28) 549 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-6 chr5 13974044 13974607 + 0.604689589251113 NA Intergenic Intergenic -50951 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-2 chr10 71117419 71118066 + 0.604689589251113 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 41948 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113 chr10 16962692 16963099 + 0.604689589251113 NA intron (NR_038020, intron 5 of 8) intron (NR_038020, intron 5 of 8) 132887 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-4 chr11 106612612 106612920 + 0.604689589251113 NA intron (NM_198292, intron 1 of 11) CpG 164 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-6 chr2 31454042 31454355 + 0.604689589251113 NA Intergenic Intergenic -16072 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak1_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-2 chr5 8422934 8423122 + 0.604689589251113 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 190 NM_178766 319653 Mm.146262 NM_178766 ENSMUSG00000054099 Slc25a40 B230315F11Rik solute carrier family 25, member 40 protein-coding common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-3 chr13 97534147 97534677 + 0.604689589251113 NA Intergenic Intergenic -25588 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113 chr1 33657926 33658333 + 0.604689589251113 NA intron (NM_008922, intron 5 of 13) intron (NM_008922, intron 5 of 13) 11665 NM_008922 19076 Mm.27705 NM_008922 ENSMUSG00000026134 Prim2 AI323589 DNA primase, p58 subunit protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-7 chr7 19119997 19120485 + 0.604689589251113 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 382 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-6 chr14 54145477 54146031 + 0.604689589251113 NA Intergenic Intergenic 108175 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_32_19_0.445137889510396_4.54449703964256_0.604689589251113-3 chr9 56871830 56872207 + 0.604689589251113 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 6914 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding common_peak1_22_27_-0.557446640688105_4.52863160171355_0.604689589251113 chr11 113062852 113063189 + 0.604689589251113 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 138818 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-11 chr6 140547725 140548104 + 0.604689589251113 NA intron (NM_144920, intron 11 of 30) intron (NM_144920, intron 11 of 30) -74749 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-2 chr1 157380348 157380710 + 0.604689589251113 NA intron (NM_177644, intron 1 of 17) intron (NM_177644, intron 1 of 17) -31823 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-5 chr18 24722284 24722852 + 0.604689589251113 NA intron (NM_001289654, intron 1 of 24) YREP_Mm|Unknown|Unknown 13945 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding unique_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-4 chr19 40519804 40520223 + 0.604689589251113 NA Intergenic Intergenic -6201 NM_009166 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-5 chr8 11477035 11477311 + 0.604689589251113 NA promoter-TSS (NR_126558) promoter-TSS (NR_126558) -756 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-5 chr16 85072388 85072723 + 0.604689589251113 NA intron (NM_001198825, intron 5 of 15) intron (NM_001198825, intron 5 of 15) 100344 NR_045889 100038614 Mm.441351 NR_045889 ENSMUSG00000115518 Gm10791 - predicted gene 10791 ncRNA common_peak1_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-4 chr7 128362887 128363353 + 0.604689589251113 NA Intergenic Intergenic 55052 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-3 chr10 63382233 63382748 + 0.604689589251113 NA promoter-TSS (NM_001253685) promoter-TSS (NM_001253685) 47 NM_001253685 30045 Mm.32550 NM_013888 ENSMUSG00000036764 Dnajc12 Jdp1|mJDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-9 chr3 152265306 152265873 + 0.604689589251113 NA intron (NM_199465, intron 1 of 12) CpG 206 NM_001357206 68810 Mm.200188 NM_199465 ENSMUSG00000039103 Nexn 1110046H09Rik|AA553326|NELIN nexilin protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-8 chr17 6778547 6779001 + 0.604689589251113 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 4006 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_32_19_0.445137889510396_4.54449703964256_0.604689589251113-2 chr6 112888381 112888840 + 0.604689589251113 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 58656 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113 chr1 184074945 184075374 + 0.604689589251113 NA 3' UTR (NM_022019, exon 4 of 4) 3' UTR (NM_022019, exon 4 of 4) 40778 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-13 chr9 107554045 107554405 + 0.604689589251113 NA promoter-TSS (NM_019713) promoter-TSS (NM_019713) -358 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-7 chr15 93711377 93711662 + 0.604689589251113 NA Intergenic Intergenic -115628 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113 chr10 84394022 84394540 + 0.604689589251113 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 46190 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-6 chr8 109087193 109087807 + 0.604689589251113 NA intron (NR_126329, intron 2 of 9) MLT1A|LTR|ERVL-MaLR 12278 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak1_32_19_0.445137889510396_4.54449703964256_0.604689589251113-12 chr8 36743102 36743563 + 0.604689589251113 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -10278 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-2 chr10 93274498 93275007 + 0.604689589251113 NA intron (NM_001322265, intron 2 of 4) (TCTCTG)n|Simple_repeat|Simple_repeat 36407 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-3 chr14 8293788 8294373 + 0.604689589251113 NA Intergenic Intergenic 15697 NM_183187 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding common_peak1_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-3 chr7 128349055 128349390 + 0.604689589251113 NA Intergenic Intergenic -51091 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_22_27_-0.557446640688105_4.52863160171355_0.604689589251113-2 chr10 67725912 67726354 + 0.604689589251113 NA Intergenic Intergenic -154174 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_136_95_0.221253073394624_6.69558903741847_0.604538630026981 chr19 20389783 20390953 + 0.604538630026981 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 303 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak2_136_95_0.221253073394624_6.69558903741847_0.604538630026981-2 chr8 70607478 70608450 + 0.604538630026981 NA intron (NM_133772, intron 1 of 16) intron (NM_133772, intron 1 of 16) 350 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak2_115_112_-0.252320920611166_6.69401850210961_0.604538630026956 chr18 62547566 62548769 + 0.604538630026956 NA promoter-TSS (NM_177829) promoter-TSS (NM_177829) 696 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-31 chr8 73124364 73124697 + 0.604422558181019 NA intron (NM_001317391, intron 4 of 15) intron (NM_001317391, intron 4 of 15) 108018 NR_039551 100628574 NR_039551 ENSMUSG00000093140 Mir28b mmu-mir-28b microRNA 28b ncRNA unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-28 chr5 124931049 124931325 + 0.604422558181019 NA Intergenic Intergenic 68482 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-5 chr10 111572682 111573030 + 0.604422558181019 NA Intergenic Intergenic 21417 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-2 chr1 180640879 180641134 + 0.604422558181019 NA promoter-TSS (NR_120498) promoter-TSS (NR_120498) -144 NM_001103182 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-41 chr9 108290542 108290825 + 0.604422558181019 NA intron (NM_025449, intron 1 of 5) intron (NM_025449, intron 1 of 5) 226 NM_025449 66257 Mm.10407 NM_025449 ENSMUSG00000032606 Nicn1 1500032A17Rik nicolin 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-7 chr13 15467078 15467276 + 0.604422558181019 NA intron (NM_008130, intron 1 of 14) intron (NM_008130, intron 1 of 14) 3454 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-6 chr11 118348750 118349161 + 0.604422558181019 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) -6421 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-17 chr4 44013488 44013716 + 0.604422558181019 NA intron (NM_001080384, intron 2 of 5) intron (NM_001080384, intron 2 of 5) 952 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak1_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-6 chr9 6550296 6550588 + 0.604422558181019 NA Intergenic Intergenic -283895 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-24 chr4 137502388 137502612 + 0.604422558181019 NA intron (NM_008305, intron 3 of 96) intron (NM_008305, intron 3 of 96) 33697 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-11 chr6 33868903 33869197 + 0.604422558181019 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -160398 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-10 chr16 87553497 87553764 + 0.604422558181019 NA intron (NM_144854, intron 1 of 4) intron (NM_144854, intron 1 of 4) 300 NM_144854 224419 Mm.194466 NM_144854 ENSMUSG00000025610 Map3k7cl C21orf7|ORF63|Tak1l Map3k7 C-terminal like protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-19 chrX 104482614 104482918 + 0.604422558181019 NA promoter-TSS (NM_001081189) promoter-TSS (NM_001081189) -16 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019 chr10 53596222 53596537 + 0.604422558181019 NA promoter-TSS (NM_025541) promoter-TSS (NM_025541) -582 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-32 chr7 101044610 101045008 + 0.604422558181019 NA Intergenic L2b|LINE|L2 -32756 NM_001302346 18442 Mm.3000 NM_008773 ENSMUSG00000032860 P2ry2 P2U1|P2Y2 purinergic receptor P2Y, G-protein coupled 2 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-28 chr9 120777077 120777291 + 0.604422558181019 NA Intergenic Intergenic 138066 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-8 chr13 34714792 34715052 + 0.604422558181019 NA Intergenic Intergenic -24720 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-28 chr7 110115023 110115319 + 0.604422558181019 NA Intergenic Intergenic -6888 NM_001355058 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-34 chr9 107700952 107701293 + 0.604422558181019 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 4469 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-2 chr1 168432570 168432765 + 0.604422558181019 NA promoter-TSS (NM_001291509) promoter-TSS (NM_001291509) -498 NM_008783 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-21 chr4 116598037 116598266 + 0.604422558181019 NA promoter-TSS (NR_029450) promoter-TSS (NR_029450) -521 NR_029450 654318 Mm.255685 NR_029450 ENSMUSG00000085408 C530005A16Rik D930044c15rik RIKEN cDNA C530005A16 gene ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-12 chr17 47226031 47226269 + 0.604422558181019 NA intron (NM_001097623, intron 3 of 19) intron (NM_001097623, intron 3 of 19) -4080 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-10 chr5 125252501 125252739 + 0.604422558181019 NA Intergenic Intergenic -73406 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-17 chr16 55550663 55550873 + 0.604422558181019 NA Intergenic Intergenic 56037 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-27 chr7 49805013 49805245 + 0.604422558181019 NA intron (NM_133740, intron 9 of 15) intron (NM_133740, intron 9 of 15) 26771 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-35 chr9 122375029 122375328 + 0.604422558181019 NA intron (NR_152865, intron 2 of 5) intron (NR_152865, intron 2 of 5) 23562 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-12 chr7 28867623 28867843 + 0.604422558181019 NA Intergenic Intergenic 3347 NM_008496 16858 Mm.20973 NM_008496 ENSMUSG00000053522 Lgals7 Galectin-7|Pig1 lectin, galactose binding, soluble 7 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-22 chr2 26507938 26508201 + 0.604422558181019 NA Intergenic Intergenic 4142 NR_132655 102639736 NR_132655 Gm35978 - predicted gene, 35978 ncRNA common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019 chr1 40171399 40171635 + 0.604422558181019 NA Intergenic Intergenic -53563 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-11 chr17 46649884 46650118 + 0.604422558181019 NA promoter-TSS (NM_025611) promoter-TSS (NM_025611) -337 NM_025611 66515 Mm.329078 NM_025611 ENSMUSG00000038545 Cul7 2510004L20Rik|AA409809|C230011P08Rik|p185|p193 cullin 7 protein-coding common_peak1_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-3 chr11 99385468 99385715 + 0.604422558181019 NA 3' UTR (NM_010660, exon 8 of 8) 3' UTR (NM_010660, exon 8 of 8) 3773 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-33 chr7 109169538 109169917 + 0.604422558181019 NA intron (NM_001302205, intron 1 of 3) CpG 785 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-12 chr17 80254984 80255199 + 0.604422558181019 NA intron (NM_198942, intron 13 of 22) intron (NM_198942, intron 13 of 22) 30640 NM_001355458 67242 Mm.279985 NM_026053 ENSMUSG00000055760 Gemin6 2610019B15Rik|2810470M17Rik gem nuclear organelle associated protein 6 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-22 chr5 36374077 36374300 + 0.604422558181019 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 23951 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-8 chr5 30647978 30648205 + 0.604422558181019 NA TTS (NR_049199) TTS (NR_049199) 152 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-37 chr9 57076491 57076688 + 0.604422558181019 NA promoter-TSS (NR_152107) promoter-TSS (NR_152107) 213 NM_011378 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-4 chr14 11555388 11555646 + 0.604422558181019 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 1964 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-26 chr6 125163134 125163483 + 0.604422558181019 NA exon (NM_008084, exon 3 of 7) exon (NM_008084, exon 3 of 7) 2465 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-15 chr2 25549788 25550113 + 0.604422558181019 NA Intergenic Intergenic -3010 NM_009422 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-26 chr5 93035669 93036110 + 0.604422558181019 NA Intergenic Intergenic 9133 NM_175270 78088 Mm.245085 NM_175270 ENSMUSG00000045314 Sowahb 5730467H21Rik|Ankrd56 sosondowah ankyrin repeat domain family member B protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-4 chr11 60109539 60109825 + 0.604422558181019 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 4669 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-3 chr10 52419382 52419625 + 0.604422558181019 NA intron (NM_030250, intron 1 of 4) intron (NM_030250, intron 1 of 4) 1956 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-12 chr14 66298403 66298825 + 0.604422558181019 NA intron (NM_029979, intron 1 of 5) intron (NM_029979, intron 1 of 5) -1485 NR_038077 69303 Mm.352258 NR_038077 ENSMUSG00000085984 1700001G11Rik - RIKEN cDNA 1700001G11 gene ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-18 chr2 131721648 131721953 + 0.604422558181019 NA Intergenic Intergenic 125856 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-9 chr16 15637028 15637279 + 0.604422558181019 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) 247 NM_008565 17217 Mm.1500 NM_008565 ENSMUSG00000022673 Mcm4 19G|AI325074|AU045576|Cdc21|Mcmd4|mKIAA4003|mcdc21 minichromosome maintenance complex component 4 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-25 chr4 150902353 150902600 + 0.604422558181019 NA intron (NM_020569, intron 5 of 6) intron (NM_020569, intron 5 of 6) 7445 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-25 chr5 102697491 102697813 + 0.604422558181019 NA intron (NM_146161, intron 2 of 8) intron (NM_146161, intron 2 of 8) -71158 NM_001286468 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-10 chr15 84232705 84232912 + 0.604422558181019 NA intron (NM_133167, intron 1 of 12) intron (NM_133167, intron 1 of 12) 765 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-7 chr2 165667534 165667760 + 0.604422558181019 NA intron (NM_001271962, intron 2 of 15) intron (NM_001271962, intron 2 of 15) 12349 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-4 chr13 42306923 42307130 + 0.604422558181019 NA 3' UTR (NM_010104, exon 5 of 5) 3' UTR (NM_010104, exon 5 of 5) 5550 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-7 chr15 76190250 76190455 + 0.604422558181019 NA intron (NM_201394, intron 11 of 31) intron (NM_201394, intron 11 of 31) 5358 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-17 chr2 60869794 60870048 + 0.604422558181019 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 11517 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-16 chr8 18846773 18846998 + 0.604422558181019 NA intron (NM_026792, intron 1 of 7) CpG 606 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-29 chrX 164420095 164420576 + 0.604422558181019 NA intron (NR_152315, intron 1 of 5) intron (NR_152315, intron 1 of 5) 555 NM_011081 18700 Mm.3781 NM_011081 ENSMUSG00000031381 Piga AI194334|Pig-a phosphatidylinositol glycan anchor biosynthesis, class A protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-16 chr16 32659007 32659263 + 0.604422558181019 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 9062 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-21 chr19 11913608 11914039 + 0.604422558181019 NA intron (NM_172635, intron 1 of 18) intron (NM_172635, intron 1 of 18) 1424 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding common_peak1_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-5 chr6 83457018 83457216 + 0.604422558181019 NA promoter-TSS (NM_001347313) promoter-TSS (NM_001347313) -725 NM_001347313 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-7 chr11 119056715 119056922 + 0.604422558181019 NA Intergenic CpG -15905 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-32 chr8 106527480 106527700 + 0.604422558181019 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 16738 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019 chr1 75293231 75293542 + 0.604422558181019 NA Intergenic Intergenic -14971 NM_009049 19711 Mm.4032 NM_009049 ENSMUSG00000033061 Resp18 AI851012 regulated endocrine-specific protein 18 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-2 chr1 82608854 82609177 + 0.604422558181019 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 22094 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-4 chr10 77033058 77033481 + 0.604422558181019 NA promoter-TSS (NM_031196) promoter-TSS (NM_031196) 57 NM_031196 20509 Mm.265060 NM_031196 ENSMUSG00000001436 Slc19a1 AI323572|RFC|RFC-1|RFC1 solute carrier family 19 (folate transporter), member 1 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019 chr1 59481564 59481768 + 0.604422558181019 NA promoter-TSS (NM_008057) promoter-TSS (NM_008057) -481 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-20 chr4 40239538 40239767 + 0.604422558181019 NA exon (NM_172689, exon 1 of 18) exon (NM_172689, exon 1 of 18) 173 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-6 chr2 33130209 33130436 + 0.604422558181019 NA intron (NM_001355201, intron 1 of 29) CpG 297 NM_001355200 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-38 chr9 67107515 67107708 + 0.604422558181019 NA non-coding (NR_153957, exon 3 of 3) non-coding (NR_153957, exon 3 of 3) 5311 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-3 chr11 51615455 51615691 + 0.604422558181019 NA Intergenic Intergenic -4200 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-11 chr17 56218563 56218787 + 0.604422558181019 NA promoter-TSS (NM_001360284) promoter-TSS (NM_001360284) -190 NM_001360284 224897 Mm.205535 NM_172624 ENSMUSG00000001229 Dpp9 6430584G11Rik|A330078I11|DPP IX|DPRP2 dipeptidylpeptidase 9 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-26 chr7 99321288 99321563 + 0.604422558181019 NA intron (NM_010837, intron 3 of 3) intron (NM_010837, intron 3 of 3) 31814 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-19 chr19 3904004 3904253 + 0.604422558181019 NA intron (NM_001136091, intron 3 of 19) intron (NM_001136091, intron 3 of 19) 1102 NM_016921 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-15 chr16 24518055 24518372 + 0.604422558181019 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -11101 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-3 chr1 191396049 191396276 + 0.604422558181019 NA intron (NM_144880, intron 1 of 12) CpG 879 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-20 chr4 100247689 100248031 + 0.604422558181019 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 152069 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-18 chr4 45523394 45523620 + 0.604422558181019 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 7321 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-9 chr5 77354736 77354958 + 0.604422558181019 NA intron (NM_001159518, intron 3 of 5) intron (NM_001159518, intron 3 of 5) 44363 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-11 chr14 65900404 65900718 + 0.604422558181019 NA Intergenic Intergenic 53183 NM_172604 219151 Mm.344095 NM_172604 ENSMUSG00000034463 Scara3 APC7|C130058N24Rik|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A, member 3 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-33 chr8 110218022 110218285 + 0.604422558181019 NA intron (NM_146215, intron 1 of 1) intron (NM_146215, intron 1 of 1) 193 NM_146215 234728 Mm.275341 NM_146215 ENSMUSG00000046441 Cmtr2 AU022703|C730036L12Rik|Ftsjd1|MTr2 cap methyltransferase 2 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-35 chr8 117384989 117385209 + 0.604422558181019 NA intron (NM_028941, intron 3 of 20) intron (NM_028941, intron 3 of 20) 35929 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-6 chr13 32913211 32913506 + 0.604422558181019 NA Intergenic Intergenic -15218 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-10 chr13 48545304 48545493 + 0.604422558181019 NA Intergenic Intergenic -7126 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-15 chr18 77066358 77066789 + 0.604422558181019 NA intron (NM_001164170, intron 1 of 12) intron (NM_001164170, intron 1 of 12) 893 NM_001164170 17344 Mm.6370 NM_008602 ENSMUSG00000025423 Pias2 6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2 protein inhibitor of activated STAT 2 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-24 chr6 108233352 108233605 + 0.604422558181019 NA intron (NM_010585, intron 2 of 61) intron (NM_010585, intron 2 of 61) 20382 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-14 chr16 6949889 6950210 + 0.604422558181019 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -89321 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-2 chr11 67527337 67527565 + 0.604422558181019 NA Intergenic Intergenic -5547 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-9 chr16 33250818 33251142 + 0.604422558181019 NA promoter-TSS (NM_080557) promoter-TSS (NM_080557) -476 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-39 chr9 70079832 70080053 + 0.604422558181019 NA Intergenic Intergenic -41854 NM_028087 72077 Mm.195555 NM_028087 ENSMUSG00000032226 Gcnt3 2010013H22Rik|2210021I22Rik|2210401J11Rik glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-10 chr17 24529871 24530355 + 0.604422558181019 NA exon (NM_177375, exon 6 of 9) exon (NM_177375, exon 6 of 9) 1862 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-23 chr3 105048950 105049432 + 0.604422558181019 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 3762 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-5 chr18 11916113 11916377 + 0.604422558181019 NA intron (NM_001146287, intron 4 of 9) intron (NM_001146287, intron 4 of 9) -75807 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-23 chr5 66259970 66260252 + 0.604422558181019 NA promoter-TSS (NM_027602) promoter-TSS (NM_027602) 213 NM_001302834 70918 Mm.23166 NM_027602 ENSMUSG00000029206 Nsun7 4921525L17Rik NOL1/NOP2/Sun domain family, member 7 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-13 chr17 83147404 83147711 + 0.604422558181019 NA Intergenic Intergenic -67726 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-7 chr13 24103758 24104018 + 0.604422558181019 NA intron (NM_026825, intron 17 of 37) intron (NM_026825, intron 17 of 37) -112674 NM_145399 214189 Mm.255667 NM_145399 ENSMUSG00000021337 Scgn - secretagogin, EF-hand calcium binding protein protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-3 chr1 192646837 192647055 + 0.604422558181019 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 124273 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-36 chr8 126618184 126618496 + 0.604422558181019 NA Intergenic Intergenic -24904 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-2 chr11 96748124 96748326 + 0.604422558181019 NA intron (NM_001177898, intron 10 of 10) intron (NM_001177898, intron 10 of 10) 29330 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-8 chr11 120633807 120634082 + 0.604422558181019 NA promoter-TSS (NM_010756) promoter-TSS (NM_010756) -397 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-5 chr12 84362081 84362306 + 0.604422558181019 NA promoter-TSS (NM_172581) promoter-TSS (NM_172581) 225 NM_172582 217707 Mm.280062 NM_172582 ENSMUSG00000021235 Coq6 5930427M12Rik|AW742344 coenzyme Q6 monooxygenase protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-14 chr4 133377756 133378079 + 0.604422558181019 NA intron (NM_016981, intron 1 of 11) intron (NM_016981, intron 1 of 11) 8141 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019 chr1 36070345 36070680 + 0.604422558181019 NA intron (NM_015818, intron 1 of 1) intron (NM_015818, intron 1 of 1) 2112 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-42 chrX 73881185 73881413 + 0.604422558181019 NA promoter-TSS (NM_008478) promoter-TSS (NM_008478) -465 NM_008478 16728 Mm.260568 NM_008478 ENSMUSG00000031391 L1cam CD171|L1|N-CAM-L1|NCAM-L1 L1 cell adhesion molecule protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-5 chr11 78328470 78328718 + 0.604422558181019 NA TTS (NM_001303423) TTS (NM_001303423) 172 NM_201406 276846 Mm.295908 NM_201406 ENSMUSG00000041958 Pigs BC058979|Gm393|Gm689 phosphatidylinositol glycan anchor biosynthesis, class S protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-27 chr5 114052365 114052664 + 0.604422558181019 NA intron (NM_001359214, intron 7 of 16) intron (NM_001359214, intron 7 of 16) 38866 NM_001359214 68666 Mm.63584 NM_026805 ENSMUSG00000042078 Svop 1110030H18Rik|AI415691|msvop SV2 related protein protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-13 chr2 173046764 173047022 + 0.604422558181019 NA Intergenic Intergenic 24991 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-4 chr10 67899291 67899522 + 0.604422558181019 NA intron (NM_178679, intron 2 of 4) intron (NM_178679, intron 2 of 4) 13256 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-30 chr8 69935204 69935537 + 0.604422558181019 NA intron (NM_001286450, intron 3 of 12) B1_Mus1|SINE|Alu -32812 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-16 chr2 85061038 85061256 + 0.604422558181019 NA intron (NM_001081260, intron 5 of 11) intron (NM_001081260, intron 5 of 11) 10687 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-2 chr10 39370754 39370987 + 0.604422558181019 NA intron (NM_001122893, intron 1 of 13) intron (NM_001122893, intron 1 of 13) 1071 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-8 chr15 76381351 76381615 + 0.604422558181019 NA intron (NM_175457, intron 1 of 43) intron (NM_175457, intron 1 of 43) 970 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-25 chr6 143641538 143641847 + 0.604422558181019 NA intron (NR_045732, intron 1 of 4) intron (NR_045732, intron 1 of 4) 9596 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-17 chr8 24404118 24404366 + 0.604422558181019 NA Intergenic Intergenic 34704 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-16 chr2 35446062 35446465 + 0.604422558181019 NA intron (NM_010283, intron 1 of 8) intron (NM_010283, intron 1 of 8) 15186 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-18 chrX 73565646 73566104 + 0.604422558181019 NA intron (NM_177236, intron 20 of 20) intron (NM_177236, intron 20 of 20) 62789 NM_177236 320707 Mm.210095 NM_177236 ENSMUSG00000031376 Atp2b3 6430519O13Rik|Pmca3 ATPase, Ca++ transporting, plasma membrane 3 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-8 chr15 81936015 81936314 + 0.604422558181019 NA promoter-TSS (NM_145473) promoter-TSS (NM_145473) -595 NM_145473 105859 Mm.22524 NM_145473 ENSMUSG00000042109 Csdc2 AI415250|AI481750|Pippin cold shock domain containing C2, RNA binding protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-13 chr15 79053544 79053797 + 0.604422558181019 NA 3' UTR (NM_144849, exon 8 of 8) 3' UTR (NM_144849, exon 8 of 8) 9189 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-9 chr13 45877832 45878378 + 0.604422558181019 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 86886 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-5 chr10 128803983 128804333 + 0.604422558181019 NA promoter-TSS (NM_001358267) promoter-TSS (NM_001358267) -191 NM_001358267 73827 Mm.24630 NM_178066 ENSMUSG00000047090 Tmem198b 1110012D08Rik transmembrane protein 198b protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-4 chr10 17007986 17008307 + 0.604422558181019 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 87636 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-21 chr4 105221576 105221904 + 0.604422558181019 NA intron (NM_080555, intron 5 of 5) intron (NM_080555, intron 5 of 5) 64393 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-14 chr18 4513841 4514315 + 0.604422558181019 NA Intergenic Intergenic -120851 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-13 chr17 78387966 78388266 + 0.604422558181019 NA intron (NM_001360407, intron 5 of 9) Charlie1|DNA|hAT-Charlie 30036 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-30 chr6 72598805 72599040 + 0.604422558181019 NA promoter-TSS (NM_144917) promoter-TSS (NM_144917) 294 NM_026159 67442 Mm.305108 NM_026159 ENSMUSG00000056666 Retsat 0610039N19Rik|C80029|MMT-7|Ppsig retinol saturase (all trans retinol 13,14 reductase) protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-12 chr2 158071846 158072047 + 0.604422558181019 NA intron (NM_001291135, intron 7 of 7) intron (NM_001291135, intron 7 of 7) 19851 NR_040609 72340 Mm.443395 NR_040609 ENSMUSG00000100860 2010009K17Rik - RIKEN cDNA 2010009K17 gene ncRNA common_peak1_11_16_-0.769532215231844_3.70269673363442_0.604422558181019 chr10 39613991 39614270 + 0.604422558181019 NA promoter-TSS (NR_152260) promoter-TSS (NR_152260) -448 NR_152260 100504626 Mm.440236 NR_152259 Gm16364 Gm16365 predicted gene 16364 ncRNA common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-11 chr17 59076450 59076805 + 0.604422558181019 NA Intergenic Intergenic -63305 NM_026497 67993 Mm.36507 NM_026497 ENSMUSG00000024228 Nudt12 0610016O18Rik nudix (nucleoside diphosphate linked moiety X)-type motif 12 protein-coding unique_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019 chr5 125176448 125176677 + 0.604422558181019 NA intron (NM_001253905, intron 1 of 42) intron (NM_001253905, intron 1 of 42) 2652 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-6 chr12 70615759 70616226 + 0.604422558181019 NA intron (NR_037248, intron 4 of 4) intron (NR_037248, intron 4 of 4) 162838 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-34 chr8 14320508 14320715 + 0.604422558181019 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 224736 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-22 chr4 150798621 150798826 + 0.604422558181019 NA Intergenic Intergenic -55073 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-29 chr8 10130350 10130678 + 0.604422558181019 NA Intergenic Intergenic -23397 NM_001319151 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-29 chr6 71932794 71933188 + 0.604422558181019 NA intron (NM_009088, intron 12 of 33) intron (NM_009088, intron 12 of 33) 23938 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak2_18_10_0.516786815481094_3.71782502637784_0.604422558181019-3 chr13 92041954 92042188 + 0.604422558181019 NA Intergenic Intergenic -54029 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-23 chr6 86471954 86472165 + 0.604422558181019 NA non-coding (NR_131125, exon 5 of 5) non-coding (NR_131125, exon 5 of 5) 8771 NR_131125 320486 Mm.391625 NR_131125 ENSMUSG00000085589 A430078I02Rik T25621 RIKEN cDNA A430078I02 gene ncRNA unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-40 chr9 106412710 106412966 + 0.604422558181019 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -16573 NM_001324533 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-19 chr3 95672968 95673387 + 0.604422558181019 NA Intergenic Intergenic 14456 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-31 chr6 99444192 99444408 + 0.604422558181019 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -8955 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-27 chr9 92275088 92275333 + 0.604422558181019 NA promoter-TSS (NM_008880) promoter-TSS (NM_008880) -392 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-9 chr15 71862558 71862855 + 0.604422558181019 NA intron (NM_027174, intron 44 of 63) intron (NM_027174, intron 44 of 63) -134868 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-24 chr5 101163544 101163924 + 0.604422558181019 NA Intergenic MIR3|SINE|MIR 317505 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-18 chr17 73873249 73873555 + 0.604422558181019 NA Intergenic Intergenic 68561 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding common_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-19 chr4 83328258 83328546 + 0.604422558181019 NA Intergenic Intergenic -4213 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-14 chr18 60952001 60952278 + 0.604422558181019 NA exon (NM_177407, exon 5 of 18) exon (NM_177407, exon 5 of 18) -1734 NR_106079 102465703 NR_106079 ENSMUSG00000098247 Mir7220 Gm27329|mmu-mir-7220 microRNA 7220 ncRNA unique_peak1_18_10_0.516786815481094_3.71782502637784_0.604422558181019-20 chr19 5466492 5466785 + 0.604422558181019 NA exon (NM_009985, exon 4 of 10) exon (NM_009985, exon 4 of 10) 1869 NM_009985 13041 Mm.113590 NM_009985 ENSMUSG00000024910 Ctsw lymphopain cathepsin W protein-coding unique_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-6 chr12 3349644 3349887 + 0.604422558181019 NA Intergenic MIR3|SINE|MIR -15367 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak2_11_16_-0.769532215231844_3.70269673363442_0.604422558181019-15 chr4 137478394 137478725 + 0.604422558181019 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 9756 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_59_38_0.338075346763636_5.45443989224407_0.603849233446504-5 chr9 77750913 77751560 + 0.603849233446504 NA Intergenic Intergenic -3299 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak2_45_49_-0.40100288797847_5.44335474578549_0.603849233446504-4 chr7 145283295 145283925 + 0.603849233446504 NA intron (NR_132643, intron 1 of 22) intron (NR_132643, intron 1 of 22) 401 NR_132644 233979 Mm.102235 NM_146206 ENSMUSG00000048677 Tpcn2 D830047E22Rik|Gm35086 two pore segment channel 2 protein-coding common_peak1_59_38_0.338075346763636_5.45443989224407_0.603849233446504-2 chr17 5137792 5138534 + 0.603849233446504 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 143089 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_59_38_0.338075346763636_5.45443989224407_0.603849233446504-3 chr3 96159833 96160377 + 0.603849233446504 NA 3' UTR (NM_001025614, exon 12 of 12) 3' UTR (NM_001025614, exon 12 of 12) -1865 NM_181409 194126 Mm.268536 NM_181409 ENSMUSG00000045934 Mtmr11 AI035306|BC051083|Cra myotubularin related protein 11 protein-coding common_peak1_59_38_0.338075346763636_5.45443989224407_0.603849233446504-6 chr9 121277374 121278232 + 0.603849233446504 NA promoter-TSS (NM_177589) promoter-TSS (NM_177589) -631 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak1_59_38_0.338075346763636_5.45443989224407_0.603849233446504 chr11 54214890 54215586 + 0.603849233446504 NA Intergenic Intergenic -1950 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA common_peak1_59_38_0.338075346763636_5.45443989224407_0.603849233446504-3 chr4 150236307 150236948 + 0.603849233446504 NA promoter-TSS (NM_001025388).2 promoter-TSS (NM_001025388).2 -570 NM_023119 13806 Mm.70666 NM_023119 ENSMUSG00000063524 Eno1 0610008I15|AL022784|Eno-1|MBP-1 enolase 1, alpha non-neuron protein-coding common_peak1_59_38_0.338075346763636_5.45443989224407_0.603849233446504-4 chr7 92874300 92874767 + 0.603849233446504 NA promoter-TSS (NM_028243) promoter-TSS (NM_028243) -286 NM_001080995 74041 Mm.26468 NM_028729 ENSMUSG00000030641 Ddias 4632434I11Rik|noxin DNA damage-induced apoptosis suppressor protein-coding common_peak1_45_49_-0.40100288797847_5.44335474578549_0.603849233446504 chr15 27997948 27998501 + 0.603849233446504 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 27624 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_45_49_-0.40100288797847_5.44335474578549_0.603849233446504-3 chr6 108448825 108449372 + 0.603849233446504 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -40645 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_59_38_0.338075346763636_5.45443989224407_0.603849233446504-2 chr19 53451906 53452495 + 0.603849233446504 NA intron (NR_028427, intron 2 of 9) intron (NR_028427, intron 2 of 9) 12596 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_45_49_-0.40100288797847_5.44335474578549_0.603849233446504-2 chr2 121506232 121506659 + 0.603849233446504 NA promoter-TSS (NM_030234) promoter-TSS (NM_030234) 211 NM_026220 67532 Mm.440764 NM_026220 ENSMUSG00000068479 Mfap1a 4432409M24Rik|Mfap1 microfibrillar-associated protein 1A protein-coding common_peak1_45_49_-0.40100288797847_5.44335474578549_0.603849233446504-3 chr8 33895766 33896310 + 0.603849233446504 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 33825 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_45_49_-0.40100288797847_5.44335474578549_0.603849233446504 chr1 58856315 58856744 + 0.603849233446504 NA Intergenic Intergenic 54027 NM_001277926 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak2_45_49_-0.40100288797847_5.44335474578549_0.603849233446504-2 chr5 115018144 115018973 + 0.603849233446504 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 7034 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_59_38_0.338075346763636_5.45443989224407_0.603849233446504 chr1 9747880 9748405 + 0.603849233446504 NA non-coding (NR_040462, exon 1 of 4) non-coding (NR_040462, exon 1 of 4) 240 NM_173443 70675 Mm.274493 NM_173443 ENSMUSG00000045210 Vcpip1 4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850 valosin containing protein (p97)/p47 complex interacting protein 1 protein-coding common_peak2_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-2 chr10 67606936 67607598 + 0.603600574790912 NA Intergenic Intergenic -35308 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak1_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-4 chr5 150522373 150522960 + 0.603600574790912 NA promoter-TSS (NM_009765) promoter-TSS (NM_009765) 45 NM_001081001 12190 Mm.236256 NM_009765 ENSMUSG00000041147 Brca2 Fancd1|RAB163 breast cancer 2, early onset protein-coding common_peak2_37_41_-0.423153968233613_5.18074043866195_0.603600574790912-3 chr13 68582250 68582808 + 0.603600574790912 NA promoter-TSS (NR_131892) promoter-TSS (NR_131892) 319 NR_138478 69577 Mm.23670 NM_027123 ENSMUSG00000021532 Fastkd3 2310010B21Rik|AW048587 FAST kinase domains 3 protein-coding common_peak1_37_41_-0.423153968233613_5.18074043866195_0.603600574790912 chr1 180812853 180813509 + 0.603600574790912 NA intron (NM_008210, intron 1 of 3) CpG 424 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding common_peak2_37_41_-0.423153968233613_5.18074043866195_0.603600574790912 chr10 60207012 60207819 + 0.603600574790912 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 11845 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding common_peak1_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-5 chr8 112010564 112011152 + 0.603600574790912 NA promoter-TSS (NM_020584) promoter-TSS (NM_020584) 496 NM_001286384 85305 Mm.196544 NM_053092 ENSMUSG00000031948 Kars AA589550|AL024334|AL033315|AL033367|D8Ertd698e|D8Wsu108e|LysRS|mKIAA0070 lysyl-tRNA synthetase protein-coding common_peak2_36_41_-0.461356681721319_5.1616390819181_0.603600574790912 chr1 74276666 74277458 + 0.603600574790912 NA Intergenic Intergenic -1538 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak2_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-3 chr16 20517075 20517407 + 0.603600574790912 NA exon (NM_001347176, exon 1 of 16) exon (NM_001347176, exon 1 of 16) 255 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 b2b2866Clo dishevelled segment polarity protein 3 protein-coding common_peak1_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-3 chr5 4192366 4192703 + 0.603600574790912 NA intron (NM_001042670, intron 1 of 1) CpG 167 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b Gm9897 mitochondrial transcription termination factor 1b protein-coding common_peak2_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-4 chr17 46556479 46557012 + 0.603600574790912 NA promoter-TSS (NM_020493) promoter-TSS (NM_020493) -583 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding unique_peak2_36_41_-0.461356681721319_5.1616390819181_0.603600574790912 chr11 109362066 109362571 + 0.603600574790912 NA promoter-TSS (NM_010303) promoter-TSS (NM_010303) -476 NM_010303 14674 Mm.193925 NM_010303 ENSMUSG00000020611 Gna13 AU024132|AU043124|Galpha13 guanine nucleotide binding protein, alpha 13 protein-coding common_peak1_37_41_-0.423153968233613_5.18074043866195_0.603600574790912-3 chr8 36828545 36828999 + 0.603600574790912 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -95718 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_37_41_-0.423153968233613_5.18074043866195_0.603600574790912-5 chr5 77407205 77407577 + 0.603600574790912 NA intron (NM_001159518, intron 1 of 5) intron (NM_001159518, intron 1 of 5) 654 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_37_41_-0.423153968233613_5.18074043866195_0.603600574790912-2 chr12 12684530 12685250 + 0.603600574790912 NA Intergenic Intergenic -14973 NR_136889 102637952 Mm.421393 NR_136889 Gm34637 - predicted gene, 34637 ncRNA common_peak1_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-2 chr1 182094759 182095198 + 0.603600574790912 NA Intergenic Intergenic -29759 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_36_41_-0.461356681721319_5.1616390819181_0.603600574790912-5 chr4 153975198 153975753 + 0.603600574790912 NA promoter-TSS (NM_007859) promoter-TSS (NM_007859) -86 NM_177673 230967 Mm.297905 NM_177673 ENSMUSG00000039523 Cep104 A930027E11|AI115523|Kiaa0562|mKIAA0562 centrosomal protein 104 protein-coding common_peak2_37_41_-0.423153968233613_5.18074043866195_0.603600574790912-4 chr18 61044084 61044616 + 0.603600574790912 NA promoter-TSS (NM_001146268) promoter-TSS (NM_001146268) -800 NM_001146268 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak1_36_41_-0.461356681721319_5.1616390819181_0.603600574790912 chr1 170867428 170867694 + 0.603600574790912 NA intron (NM_001081304, intron 1 of 15) CpG 210 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak1_37_41_-0.423153968233613_5.18074043866195_0.603600574790912-2 chr6 91878009 91878454 + 0.603600574790912 NA intron (NM_172730, intron 1 of 10) CpG 178 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding common_peak2_49_31_0.362298862152309_5.18114943107615_0.603600574790906-4 chr8 91999698 92000226 + 0.603600574790906 NA Intergenic Intergenic -198308 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-3 chr13 31165708 31166375 + 0.603600574790906 NA Intergenic Intergenic 75045 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-6 chr17 35698247 35698809 + 0.603600574790906 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 2062 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-5 chr15 76924978 76925324 + 0.603600574790906 NA intron (NM_001168276, intron 1 of 5) CpG 297 NM_172817 239546 Mm.183650 NM_172817 ENSMUSG00000054967 Zfp647 6030449J21|Es492|Znf250 zinc finger protein 647 protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-4 chr13 118386509 118387157 + 0.603600574790906 NA exon (NM_021556, exon 1 of 5) exon (NM_021556, exon 1 of 5) 419 NM_021556 59054 Mm.143810 NM_021556 ENSMUSG00000021731 Mrps30 2610020A16Rik|AA968347|PAP|Pdcd9 mitochondrial ribosomal protein S30 protein-coding common_peak2_49_31_0.362298862152309_5.18114943107615_0.603600574790906 chr12 108395577 108395969 + 0.603600574790906 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -14860 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_49_31_0.362298862152309_5.18114943107615_0.603600574790906-3 chr17 35698315 35698841 + 0.603600574790906 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 2012 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-8 chr18 74778121 74778749 + 0.603600574790906 NA promoter-TSS (NR_028560) promoter-TSS (NR_028560) 20 NR_028560 100217466 NR_028560 Scarna17 MBII-119 small Cajal body-specific RNA 17 ncRNA common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-7 chr18 56359102 56359613 + 0.603600574790906 NA Intergenic Intergenic -40983 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding common_peak2_49_31_0.362298862152309_5.18114943107615_0.603600574790906-2 chr15 59549616 59550079 + 0.603600574790906 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -98807 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-9 chr4 89479534 89480147 + 0.603600574790906 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -168808 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906-2 chr11 83935582 83936216 + 0.603600574790906 NA Intergenic Intergenic -6191 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak1_49_31_0.362298862152309_5.18114943107615_0.603600574790906 chr11 70969381 70969906 + 0.603600574790906 NA promoter-TSS (NM_001252413) promoter-TSS (NM_001252413) 330 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_121_84_0.23071015359193_6.52474601293367_0.603529793279841 chr10 86301474 86302632 + 0.603529793279841 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 1641 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_121_84_0.23071015359193_6.52474601293367_0.603529793279841-2 chr17 47610578 47612243 + 0.603529793279841 NA promoter-TSS (NM_020048) promoter-TSS (NM_020048) 82 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak1_102_100_-0.260624117693568_6.52789942390501_0.603529793279841 chr7 126791646 126792467 + 0.603529793279841 NA intron (NM_019674, intron 2 of 8) CpG 308 NM_001360464 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|PP-X|PP4C|Ppx|pp4 protein phosphatase 4, catalytic subunit protein-coding common_peak1_207_148_0.18520471527322_7.31177087809877_0.603339456283352 chr12 84191907 84193827 + 0.603339456283352 NA intron (NM_001163501, intron 1 of 12) CpG 1148 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_181_169_-0.196303671254947_7.31123910051023_0.603339456283352 chr10 67547661 67549295 + 0.603339456283352 NA exon (NM_001005419, exon 1 of 1) exon (NM_001005419, exon 1 of 1) 477 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_207_148_0.18520471527322_7.31177087809877_0.603339456283352-2 chr7 83883003 83884831 + 0.603339456283352 NA 5' UTR (NM_030705, exon 1 of 1) 5' UTR (NM_030705, exon 1 of 1) 424 NM_030705 80889 Mm.272998 NM_030705 ENSMUSG00000070462 Tlnrd1 AW061151|Mesdc1 talin rod domain containing 1 protein-coding common_peak2_433_384_-0.13071600560184_8.52335663278134_0.603243153388867 chr15 80012445 80014890 + 0.603243153388867 NA intron (NM_011057, intron 1 of 6) CpG 1141 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_188_134_0.190335323850214_7.17198325897594_0.602866261931649 chr13 45954473 45957031 + 0.602866261931649 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 9239 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_163_154_-0.212219817247044_7.17001449665072_0.602866261931649 chr19 38029296 38030686 + 0.602866261931649 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 13586 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_70_46_0.310031890029093_5.70960479669218_0.602366141647657 chr15 66899063 66899948 + 0.602366141647657 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 8112 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_70_46_0.310031890029093_5.70960479669218_0.602366141647657-2 chr7 141447649 141448067 + 0.602366141647657 NA promoter-TSS (NR_034049) promoter-TSS (NR_034049) 207 NM_001360658 67186 Mm.380435 NM_026020 ENSMUSG00000025508 Rplp2 2700049I22Rik ribosomal protein, large P2 protein-coding common_peak1_70_46_0.310031890029093_5.70960479669218_0.602366141647657-2 chr17 56717770 56718380 + 0.602366141647657 NA promoter-TSS (NM_001166474) promoter-TSS (NM_001166474) 313 NM_027244 69875 Mm.279823 NM_027244 ENSMUSG00000002379 Ndufa11 2010012C24Rik|AV006275|B14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11 protein-coding common_peak2_70_46_0.310031890029093_5.70960479669218_0.602366141647657 chr11 117268878 117269570 + 0.602366141647657 NA intron (NM_001113487, intron 1 of 10) intron (NM_001113487, intron 1 of 10) 2978 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_131_126_-0.235728661520896_6.87082035601172_0.601992624465646 chr1 37997649 37999368 + 0.601992624465646 NA intron (NM_198303, intron 1 of 23) CpG 498 NM_198303 226982 Mm.260943 NM_198303 ENSMUSG00000026083 Eif5b A030003E17Rik|BC018347|IF2 eukaryotic translation initiation factor 5B protein-coding common_peak2_131_126_-0.235728661520896_6.87082035601172_0.601992624465646-2 chr1 91250364 91251548 + 0.601992624465646 NA intron (NM_001355764, intron 1 of 10) intron (NM_001355764, intron 1 of 10) 390 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak2_131_126_-0.235728661520896_6.87082035601172_0.601992624465646-3 chr8 70634366 70635111 + 0.601992624465646 NA Intergenic Intergenic -2282 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_153_108_0.205595147821019_6.87098189868744_0.601992624465622-3 chr8 126602774 126604140 + 0.601992624465622 NA Intergenic Intergenic -10021 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_153_108_0.205595147821019_6.87098189868744_0.601992624465622 chr3 37311927 37313343 + 0.601992624465622 NA promoter-TSS (NM_001255992) promoter-TSS (NM_001255992) 81 NM_001008502 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding common_peak1_153_108_0.205595147821019_6.87098189868744_0.601992624465622-2 chr4 137356689 137357642 + 0.601992624465622 NA intron (NM_009861, intron 1 of 5) CpG 594 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_315_231_0.145476712001217_7.93071935112818_0.601974793591887 chr5 92855794 92858962 + 0.601974793591887 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -40615 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_117_113_-0.240543908415306_6.71261805995709_0.601627777650759-2 chr3 108145555 108146634 + 0.601627777650759 NA promoter-TSS (NM_010306) promoter-TSS (NM_010306) 58 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak2_116_113_-0.252735614827963_6.70652220675076_0.601627777650759 chr17 73572911 73574186 + 0.601627777650759 NA intron (NM_027864, intron 2 of 14) intron (NM_027864, intron 2 of 14) 136903 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_117_113_-0.240543908415306_6.71261805995709_0.601627777650759 chr17 73572929 73574261 + 0.601627777650759 NA intron (NM_027864, intron 2 of 14) intron (NM_027864, intron 2 of 14) 136856 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak2_117_113_-0.240543908415306_6.71261805995709_0.601627777650759 chr11 88528906 88530897 + 0.601627777650759 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -89350 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_227_164_0.169566883380297_7.45110565593597_0.601511659815801 chr9 103363917 103365583 + 0.601511659815801 NA 5' UTR (NM_001134427, exon 1 of 5) 5' UTR (NM_001134427, exon 1 of 5) 229 NM_001134427 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak1_228_164_0.175836113766378_7.45424027112901_0.601511659815801 chr8 104441731 104443082 + 0.601511659815801 NA intron (NM_001013380, intron 2 of 12) intron (NM_001013380, intron 2 of 12) 641 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak1_77_78_-0.304461951067779_6.15154977264321_0.601241822381509 chr10 27984494 27985085 + 0.601241822381509 NA Intergenic Intergenic -90031 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_94_64_0.259397560697327_6.15206659337712_0.601241822381509 chr6 82041688 82042349 + 0.601241822381509 NA intron (NM_145570, intron 1 of 2) intron (NM_145570, intron 1 of 2) 390 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak2_94_64_0.259397560697327_6.15206659337712_0.601241822381509-2 chr9 78021182 78022117 + 0.601241822381509 NA Intergenic Intergenic -30309 NM_008103 14531 Mm.1400 NM_008103 ENSMUSG00000023333 Gcm1 GCMa|Gcm-rs2|Gcm1-rs1|glide glial cells missing homolog 1 protein-coding common_peak1_94_64_0.259397560697327_6.15206659337712_0.601241822381509 chr17 78417342 78418509 + 0.601241822381509 NA exon (NM_001285946, exon 1 of 7) exon (NM_001285946, exon 1 of 7) 227 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_77_78_-0.304461951067779_6.15154977264321_0.601241822381509 chr18 3382785 3383579 + 0.601241822381509 NA promoter-TSS (NM_029402) promoter-TSS (NM_029402) -43 NM_029402 71745 Mm.291707 NM_029402 ENSMUSG00000024231 Cul2 1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106 cullin 2 protein-coding common_peak1_77_78_-0.304461951067779_6.15154977264321_0.601241822381509-2 chr17 29268861 29269725 + 0.601241822381509 NA intron (NM_030561, intron 1 of 8) intron (NM_030561, intron 1 of 8) 505 NM_030561 80748 Mm.290116 NM_030561 ENSMUSG00000052712 BC004004 2400006G15Rik cDNA sequence BC004004 protein-coding common_peak1_94_64_0.259397560697327_6.15206659337712_0.601241822381509-2 chr4 119120365 119121217 + 0.601241822381509 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 12046 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_108_74_0.249876194632566_6.35375678781216_0.601197622537264 chr12 86800314 86801216 + 0.601197622537264 NA Intergenic (GAAA)n|Simple_repeat|Simple_repeat 66396 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_108_74_0.249876194632566_6.35375678781216_0.601197622537264-2 chr7 45394892 45395616 + 0.601197622537264 NA intron (NR_126539, intron 1 of 9) intron (NR_126539, intron 1 of 9) 488 NM_009224 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding common_peak1_89_89_-0.287539928476336_6.34808313209151_0.601197622537264 chr14 20545605 20546553 + 0.601197622537264 NA promoter-TSS (NR_033571) promoter-TSS (NR_033571) -214 NR_033571 75602 Mm.437061 NR_033571 ENSMUSG00000084925 1810062O18Rik - RIKEN cDNA 1810062O18 gene ncRNA common_peak1_108_74_0.249876194632566_6.35375678781216_0.601197622537264 chr19 40257032 40258106 + 0.601197622537264 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 14047 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak1_164_155_-0.212789294857099_7.1790075714337_0.600781310742355 chr10 95562603 95564111 + 0.600781310742355 NA intron (NM_001358996, intron 1 of 4) CpG 789 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_293_214_0.151890936857559_7.82413831801824_0.600778342966347 chr5 23431934 23434280 + 0.600778342966347 NA non-coding (NR_040469, exon 1 of 1) non-coding (NR_040469, exon 1 of 1) 1246 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-8 chr18 46404460 46404949 + 0.600314449189972 NA Intergenic Intergenic 61112 NR_045438 72076 Mm.82766 NM_028086 Mospd4 2010013H21Rik motile sperm domain containing 4 pseudo common_peak1_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-2 chr16 26105357 26105896 + 0.600314449189972 NA exon (NM_173379, exon 1 of 15) exon (NM_173379, exon 1 of 15) 158 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-2 chr10 19149547 19149839 + 0.600314449189972 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) 7944 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-13 chr6 30355331 30356036 + 0.600314449189972 NA Intergenic Intergenic 35337 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-7 chr3 88493264 88493587 + 0.600314449189972 NA promoter-TSS (NM_019390) promoter-TSS (NM_019390) -113 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_40_25_0.37757482903259_4.88922713265739_0.600314449189972-2 chr15 73615806 73616219 + 0.600314449189972 NA intron (NM_001033219, intron 1 of 7) intron (NM_001033219, intron 1 of 7) 1312 NM_001357747 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-6 chr16 92553761 92554325 + 0.600314449189972 NA Intergenic Intergenic 55896 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak1_29_34_-0.498750471745837_4.87990778107205_0.600314449189972 chr11 78382154 78382620 + 0.600314449189972 NA intron (NM_008238, intron 1 of 8) intron (NM_008238, intron 1 of 8) 4221 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972 chr1 135283659 135284008 + 0.600314449189972 NA exon (NM_145417, exon 1 of 11) exon (NM_145417, exon 1 of 11) 251 NM_145417 215615 Mm.291048 NM_145417 ENSMUSG00000041926 Rnpep - arginyl aminopeptidase (aminopeptidase B) protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-5 chr16 56716408 56716897 + 0.600314449189972 NA intron (NM_001357126, intron 1 of 8) intron (NM_001357126, intron 1 of 8) 798 NM_001357124 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-14 chr7 19269315 19269793 + 0.600314449189972 NA intron (NM_009499, intron 1 of 12) intron (NM_009499, intron 1 of 12) 2300 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak1_40_25_0.37757482903259_4.88922713265739_0.600314449189972-3 chr4 151860910 151861370 + 0.600314449189972 NA intron (NM_001081557, intron 1 of 23) CpG 628 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-4 chr11 51967848 51968182 + 0.600314449189972 NA intron (NM_029976, intron 1 of 2) intron (NM_029976, intron 1 of 2) 384 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_29_34_-0.498750471745837_4.87990778107205_0.600314449189972 chr17 29440515 29440961 + 0.600314449189972 NA Intergenic Intergenic -50307 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-11 chr4 141077893 141078189 + 0.600314449189972 NA intron (NR_149724, intron 1 of 8) CpG 316 NR_149724 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898|NECAP-2 NECAP endocytosis associated 2 protein-coding common_peak1_40_25_0.37757482903259_4.88922713265739_0.600314449189972-4 chr7 25831364 25831909 + 0.600314449189972 NA Intergenic Intergenic -15106 NM_028775 74134 Mm.275188 NM_028775 ENSMUSG00000040703 Cyp2s1 1200011C15Rik|AU041727|C79779 cytochrome P450, family 2, subfamily s, polypeptide 1 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-4 chr11 86571697 86572283 + 0.600314449189972 NA Intergenic AT_rich|Low_complexity|Low_complexity 12168 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972 chr2 156008176 156008700 + 0.600314449189972 NA promoter-TSS (NM_001145352) promoter-TSS (NM_001145352) 410 NM_001356413 66366 Mm.141276 NM_025516 ENSMUSG00000005881 Ergic3 2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84 ERGIC and golgi 3 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-6 chr18 33907662 33908028 + 0.600314449189972 NA intron (NM_013512, intron 3 of 23) intron (NM_013512, intron 3 of 23) 99361 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-2 chr10 60752232 60752675 + 0.600314449189972 NA intron (NM_023596, intron 1 of 5) intron (NM_023596, intron 1 of 5) 329 NM_023596 71279 Mm.284462 NM_023596 ENSMUSG00000020100 Slc29a3 4933435C21Rik|AW987637|Ent3 solute carrier family 29 (nucleoside transporters), member 3 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-7 chr17 29887804 29888440 + 0.600314449189972 NA promoter-TSS (NM_001081160) promoter-TSS (NM_001081160) -240 NM_001081160 74762 Mm.40901 NM_001081160 ENSMUSG00000043557 Mdga1 1200011I03Rik|GPIM|Mamdc3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding common_peak1_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-3 chr2 132247110 132247591 + 0.600314449189972 NA intron (NM_001141971, intron 1 of 3) intron (NM_001141971, intron 1 of 3) 438 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-3 chr10 24393031 24393430 + 0.600314449189972 NA Intergenic Intergenic 169713 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-12 chr5 138754562 138754951 + 0.600314449189972 NA promoter-TSS (NM_030565) promoter-TSS (NM_030565) -325 NM_030565 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding common_peak1_40_25_0.37757482903259_4.88922713265739_0.600314449189972 chr15 66878426 66879061 + 0.600314449189972 NA Intergenic Intergenic -12650 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972 chr1 133909001 133909575 + 0.600314449189972 NA Intergenic Intergenic -1289 NM_001160420 269120 Mm.59985 NM_054076 ENSMUSG00000010311 Optc - opticin protein-coding common_peak1_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-4 chr3 63962473 63963190 + 0.600314449189972 NA intron (NM_001272035, intron 1 of 6) intron (NM_001272035, intron 1 of 6) 1902 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-8 chr8 95143249 95143756 + 0.600314449189972 NA promoter-TSS (NM_001145831) promoter-TSS (NM_001145831) -962 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-9 chr3 65665970 65666370 + 0.600314449189972 NA promoter-TSS (NM_001166659) promoter-TSS (NM_001166659) -58 NM_001037923 624866 Mm.296317 NM_001037923 ENSMUSG00000074579 Lekr1 EG546798|EG624866|Gm6534 leucine, glutamate and lysine rich 1 protein-coding common_peak2_40_25_0.37757482903259_4.88922713265739_0.600314449189972-5 chr15 62320709 62321095 + 0.600314449189972 NA Intergenic Intergenic -101451 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-5 chr8 61621025 61621597 + 0.600314449189972 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -30142 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-3 chr11 5902917 5903251 + 0.600314449189972 NA intron (NM_001287386, intron 8 of 9) intron (NM_001287386, intron 8 of 9) -4302 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding common_peak2_29_34_-0.498750471745837_4.87990778107205_0.600314449189972-10 chr3 96904652 96905202 + 0.600314449189972 NA intron (NM_026229, intron 1 of 13) CpG 371 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding common_peak2_103_101_-0.260997126662871_6.54192677864006_0.60026900239382 chr3 63963149 63964601 + 0.60026900239382 NA exon (NM_015728, exon 1 of 6) exon (NM_015728, exon 1 of 6) 858 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak2_122_85_0.225530415125795_6.539029962265_0.600269002393796 chr16 23308055 23309323 + 0.600269002393796 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 18219 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_123_85_0.23712980527744_6.54482965734082_0.600269002393796 chr17 87281956 87283434 + 0.600269002393796 NA promoter-TSS (NM_028639) promoter-TSS (NM_028639) 119 NR_015506 74597 Mm.63783 NR_015506 ENSMUSG00000085287 4833418N02Rik - RIKEN cDNA 4833418N02 gene ncRNA common_peak1_82_55_0.280968698833314_5.94783927147426_0.599944741495252 chr5 76183910 76184726 + 0.599944741495252 NA exon (NM_011626, exon 1 of 6) exon (NM_011626, exon 1 of 6) 438 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding common_peak1_66_68_-0.326971439137782_5.94503873720928_0.599944741495252-2 chr7 141328300 141329182 + 0.599944741495252 NA intron (NM_027797, intron 1 of 5) intron (NM_027797, intron 1 of 5) 611 NM_027797 71448 Mm.248960 NM_027797 ENSMUSG00000025505 Tmem80 5530601I19Rik transmembrane protein 80 protein-coding common_peak2_66_68_-0.326971439137782_5.94503873720928_0.599944741495252 chr2 131392483 131393464 + 0.599944741495252 NA Intergenic Intergenic -40081 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak1_66_68_-0.326971439137782_5.94503873720928_0.599944741495252 chr12 87387404 87388101 + 0.599944741495252 NA intron (NM_011479, intron 1 of 11) CpG 603 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding common_peak2_133_127_-0.225501961932856_6.88724901903357_0.599437108352779 chr4 55350031 55351306 + 0.599437108352779 NA intron (NM_009011, intron 1 of 9) CpG 626 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak2_149_141_-0.213667634698163_7.0429133021556_0.599351229212485 chr9 67105018 67107118 + 0.599351229212485 NA non-coding (NR_153957, exon 2 of 3) non-coding (NR_153957, exon 2 of 3) 3768 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak1_118_114_-0.241055123607037_6.72496248914086_0.598772289134449 chr4 135271178 135272601 + 0.598772289134449 NA intron (NM_013885, intron 1 of 5) B1F|SINE|Alu 871 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_190_136_0.184198101986491_7.19013113395377_0.598724988253947 chr10 117709463 117711174 + 0.598724988253947 NA intron (NM_010786, intron 1 of 11) CpG-1528 440 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding common_peak1_190_136_0.184198101986491_7.19013113395377_0.598724988253947-2 chr3 103967634 103969071 + 0.598724988253947 NA promoter-TSS (NR_030676) promoter-TSS (NR_030676) -36 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak2_311_280_-0.14921748225809_8.05981757909188_0.598155906706353 chr1 64119148 64121367 + 0.598155906706353 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 1132 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_414_367_-0.129691395558703_8.45871625827766_0.597966242010819 chr8 110807841 110811881 + 0.597966242010819 NA TTS (NM_133953) TTS (NM_133953) -3937 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_210_151_0.176959440715051_7.33640723380111_0.597715791550612 chr16 23107538 23109174 + 0.597715791550612 NA promoter-TSS (NR_030705) promoter-TSS (NR_030705) -597 NR_030705 100216532 NR_030705 ENSMUSG00000088524 Snord2 - small nucleolar RNA, C/D box 2 snoRNA common_peak1_109_75_0.243849808334109_6.36985241761064_0.597549088843102 chr3 135670325 135671420 + 0.597549088843102 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 20675 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_91_90_-0.271996317975685_6.37179648121085_0.597549088843102 chr16 55966076 55966983 + 0.597549088843102 NA intron (NM_024218, intron 1 of 5) CpG 254 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding common_peak2_91_90_-0.271996317975685_6.37179648121085_0.597549088843102 chr1 60097884 60098883 + 0.597549088843102 NA promoter-TSS (NM_001199061) promoter-TSS (NM_001199061) 117 NM_001199060 57750 Mm.281079 NM_021312 ENSMUSG00000026019 Wdr12 4933402C23Rik|Ytm1|Ytm1p WD repeat domain 12 protein-coding common_peak1_91_90_-0.271996317975685_6.37179648121085_0.597549088843102-2 chr4 126129860 126130503 + 0.597549088843102 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -17822 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_91_90_-0.271996317975685_6.37179648121085_0.597549088843102-2 chr4 150371407 150372647 + 0.597549088843102 NA intron (NM_001085492, intron 1 of 22) CpG 90111 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak2_90_90_-0.287652395742698_6.36396844232735_0.597549088843102 chr7 51269110 51270459 + 0.597549088843102 NA Intergenic Intergenic -241245 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak2_124_86_0.231957285484215_6.55892213859084_0.597077845582964 chr11 101442442 101443594 + 0.597077845582964 NA intron (NM_011289, intron 2 of 4) intron (NM_011289, intron 2 of 4) 773 NM_011289 19942 Mm.340658 NM_011289 ENSMUSG00000063316 Rpl27 - ribosomal protein L27 protein-coding common_peak1_96_65_0.267216435052624_6.17800233688477_0.597058903291781 chr5 139797158 139797802 + 0.597058903291781 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 5944 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_78_79_-0.304360428612086_6.16974788058132_0.597058903291781 chr1 43256335 43257168 + 0.597058903291781 NA Intergenic Intergenic -59990 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_95_65_0.252371567940309_6.17057990332861_0.597058903291781 chr12 80375079 80376440 + 0.597058903291781 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 15918 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_96_65_0.267216435052624_6.17800233688477_0.597058903291781-2 chr5 148994155 148995052 + 0.597058903291781 NA intron (NR_102383, intron 1 of 1) intron (NR_102383, intron 1 of 1) 611 NR_102383 319982 Mm.33303 NR_102383 ENSMUSG00000106951 5930430L01Rik - RIKEN cDNA 5930430L01 gene ncRNA common_peak1_312_281_-0.149758456582322_8.06467212410763_0.597044209328372 chr19 28293958 28295785 + 0.597044209328372 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -283705 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_60_39_0.325227974415514_5.48454208209512_0.597008909195482-4 chr5 34573849 34574343 + 0.597008909195482 NA promoter-TSS (NR_106111) promoter-TSS (NR_106111) -55 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA unique_peak2_46_50_-0.398764038669441_5.47304332263677_0.597008909195482 chr10 79983729 79984584 + 0.597008909195482 NA 5' UTR (NM_001003949, exon 1 of 11) 5' UTR (NM_001003949, exon 1 of 11) 104 NM_001359632 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding common_peak2_60_39_0.325227974415514_5.48454208209512_0.597008909195482-2 chr13 40723317 40724065 + 0.597008909195482 NA intron (NM_001122948, intron 3 of 6) intron (NM_001122948, intron 3 of 6) -4117 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA common_peak1_46_50_-0.398764038669441_5.47304332263677_0.597008909195482-4 chrX 56678314 56679115 + 0.597008909195482 NA Intergenic Intergenic -53047 NM_010211 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding common_peak1_46_50_-0.398764038669441_5.47304332263677_0.597008909195482-2 chr2 60637149 60637767 + 0.597008909195482 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 36235 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_60_39_0.325227974415514_5.48454208209512_0.597008909195482 chr19 44145984 44146454 + 0.597008909195482 NA intron (NM_028607, intron 1 of 4) CpG 227 NM_028607 73689 Mm.124685 NM_028607 ENSMUSG00000057506 Bloc1s2 2410089B13Rik|BLOS2|Bloc1s2a biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding common_peak1_46_50_-0.398764038669441_5.47304332263677_0.597008909195482-3 chr9 67049471 67049915 + 0.597008909195482 NA promoter-TSS (NM_001164249) promoter-TSS (NM_001164249) -480 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_60_39_0.325227974415514_5.48454208209512_0.597008909195482-2 chr3 51196681 51197272 + 0.597008909195482 NA Intergenic PB1D7|SINE|Alu -27471 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_60_39_0.325227974415514_5.48454208209512_0.597008909195482-5 chr9 95512054 95512469 + 0.597008909195482 NA promoter-TSS (NM_001114977) promoter-TSS (NM_001114977) -265 NM_001357974 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak1_60_39_0.325227974415514_5.48454208209512_0.597008909195482-3 chr4 130113016 130113680 + 0.597008909195482 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 5792 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak1_46_50_-0.398764038669441_5.47304332263677_0.597008909195482 chr16 4213785 4214535 + 0.597008909195482 NA promoter-TSS (NM_001025432) promoter-TSS (NM_001025432) -756 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak2_60_39_0.325227974415514_5.48454208209512_0.597008909195482 chr1 74053211 74054004 + 0.597008909195482 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 70840 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_134_128_-0.22607848534246_6.89818801275202_0.596924666573505 chr1 133660073 133661399 + 0.596924666573505 NA 5' UTR (NM_001166552, exon 1 of 1) 5' UTR (NM_001166552, exon 1 of 1) 149 NM_001166552 667118 Mm.245357 NM_001166552 ENSMUSG00000102049 Zbed6 Gm8466|MGR zinc finger, BED type containing 6 protein-coding common_peak2_134_128_-0.22607848534246_6.89818801275202_0.596924666573505 chr11 68851435 68853144 + 0.596924666573505 NA intron (NM_023668, intron 1 of 8) intron (NM_023668, intron 1 of 8) 842 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak2_134_128_-0.22607848534246_6.89818801275202_0.596924666573505-2 chr14 32159684 32160890 + 0.596924666573505 NA intron (NM_001033988, intron 1 of 9) intron (NM_001033988, intron 1 of 9) 400 NM_001033988 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak1_156_110_0.2070014446743_6.89791658868726_0.596924666573505 chr9 66349944 66351354 + 0.596924666573505 NA intron (NM_145617, intron 1 of 77) CpG 199 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_297_217_0.151258092175097_7.84381337086447_0.596856156223811 chr15 83148034 83150060 + 0.596856156223811 NA promoter-TSS (NR_004432) promoter-TSS (NR_004432) 331 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak1_192_137_0.188627913692023_7.20283841362418_0.596696708377593 chr2 30445749 30447740 + 0.596696708377593 NA 3' UTR (NM_138748, exon 10 of 10) 3' UTR (NM_138748, exon 10 of 10) 27455 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_71_47_0.299693768378305_5.73480938491031_0.596655827845599-3 chr7 43480266 43481228 + 0.596655827845599 NA intron (NM_001164518, intron 1 of 7) intron (NM_001164518, intron 1 of 7) 9276 NM_001164518 210094 Mm.228087 NM_001164518 ENSMUSG00000013367 Iglon5 A230106M20Rik|Gm1431 IgLON family member 5 protein-coding common_peak2_71_47_0.299693768378305_5.73480938491031_0.596655827845599-2 chr9 113741031 113741671 + 0.596655827845599 NA promoter-TSS (NM_001286599) promoter-TSS (NM_001286599) -122 NM_001286599 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak2_71_47_0.299693768378305_5.73480938491031_0.596655827845599 chr10 80115755 80116338 + 0.596655827845599 NA non-coding (NR_126043, exon 1 of 11) non-coding (NR_126043, exon 1 of 11) 243 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak1_71_47_0.299693768378305_5.73480938491031_0.596655827845599-2 chr16 17891097 17891621 + 0.596655827845599 NA intron (NM_001109750, intron 1 of 9) CpG 369 NM_010048 13356 Mm.254515 NM_010048 ENSMUSG00000003166 Dgcr2 9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163 DiGeorge syndrome critical region gene 2 protein-coding common_peak1_71_47_0.299693768378305_5.73480938491031_0.596655827845599 chr10 4272751 4273897 + 0.596655827845599 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 6995 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak2_231_167_0.168485639452018_7.47656024250477_0.596440844087377 chr9 103363846 103365611 + 0.596440844087377 NA 5' UTR (NM_001134427, exon 1 of 5) 5' UTR (NM_001134427, exon 1 of 5) 251 NM_001134427 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak1_140_98_0.218085305876656_6.73839927301794_0.595970598170711 chr17 88625904 88627558 + 0.595970598170711 NA 5' UTR (NM_029858, exon 1 of 4) 5' UTR (NM_029858, exon 1 of 4) 176 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_119_115_-0.241558409074931_6.73720179059011_0.595970598170711 chr11 106919429 106920683 + 0.595970598170711 NA intron (NM_025481, intron 1 of 18) intron (NM_025481, intron 1 of 18) 659 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak1_778_671_-0.0963444039974597_9.34414522078003_0.595733378419987 chr9 96782620 96789231 + 0.595733378419987 NA Intergenic Intergenic 20363 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_38_42_-0.419890978019529_5.21631926569233_0.595371917655149 chr12 8498014 8498501 + 0.595371917655149 NA 3' UTR (NM_007483, exon 1 of 1) 3' UTR (NM_007483, exon 1 of 1) 1752 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_38_42_-0.419890978019529_5.21631926569233_0.595371917655149-3 chr4 128711621 128712244 + 0.595371917655149 NA intron (NM_018774, intron 6 of 14) CT-rich|Low_complexity|Low_complexity -15639 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic 2 protein-coding common_peak2_38_42_-0.419890978019529_5.21631926569233_0.595371917655149-2 chr19 40402020 40402365 + 0.595371917655149 NA intron (NM_001034962, intron 2 of 22) intron (NM_001034962, intron 2 of 22) 118 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_38_42_-0.419890978019529_5.21631926569233_0.595371917655149-2 chr2 32137438 32137853 + 0.595371917655149 NA Intergenic Intergenic -13503 NM_172661 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_38_42_-0.419890978019529_5.21631926569233_0.595371917655149 chr11 53802848 53803196 + 0.595371917655149 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 32549 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_50_32_0.346272340205453_5.21753028946118_0.595371917655143-2 chr6 47788256 47788775 + 0.595371917655143 NA Intergenic Intergenic 15137 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA common_peak1_50_32_0.346272340205453_5.21753028946118_0.595371917655143-3 chr8 110938242 110938823 + 0.595371917655143 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 18667 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak1_50_32_0.346272340205453_5.21753028946118_0.595371917655143-4 chrX 155262515 155263180 + 0.595371917655143 NA intron (NM_019736, intron 1 of 14) intron (NM_019736, intron 1 of 14) 404 NM_019736 56360 Mm.268710 NM_019736 ENSMUSG00000025287 Acot9 0610041P13Rik|Acate2|C76421|MT-ACT48|MTE-2|U8|p48 acyl-CoA thioesterase 9 protein-coding common_peak2_50_32_0.346272340205453_5.21753028946118_0.595371917655143 chr1 153332226 153332718 + 0.595371917655143 NA exon (NM_010683, exon 1 of 28) exon (NM_010683, exon 1 of 28) 314 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak2_50_32_0.346272340205453_5.21753028946118_0.595371917655143-2 chr3 107793021 107793516 + 0.595371917655143 NA Intergenic Intergenic -32799 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_50_32_0.346272340205453_5.21753028946118_0.595371917655143 chr18 71215083 71215839 + 0.595371917655143 NA Intergenic Intergenic 647169 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_83_56_0.272589702281395_5.96918486530544_0.595144600872403 chr2 118746020 118746838 + 0.595144600872403 NA exon (NM_001301269, exon 1 of 1) exon (NM_001301269, exon 1 of 1) 671 NM_001301269 100043272 Mm.398072 NM_001301269 ENSMUSG00000074918 Inafm2 5430417L22Rik InaF motif containing 2 protein-coding common_peak1_67_69_-0.326507139181759_5.96602944735409_0.595144600872403-2 chr4 154011623 154012367 + 0.595144600872403 NA exon (NM_201226, exon 1 of 7) exon (NM_201226, exon 1 of 7) 192 NM_201226 72946 Mm.260690 NM_201226 ENSMUSG00000029028 Lrrc47 2900010D03Rik|AA960559|mKIAA1185 leucine rich repeat containing 47 protein-coding common_peak2_83_56_0.272589702281395_5.96918486530544_0.595144600872403 chr3 79977943 79978549 + 0.595144600872403 NA Intergenic Intergenic 92316 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_67_69_-0.326507139181759_5.96602944735409_0.595144600872403-2 chr10 85916337 85916964 + 0.595144600872403 NA promoter-TSS (NM_001302887) promoter-TSS (NM_001302887) 79 NM_181650 72843 Mm.25307 NM_181650 ENSMUSG00000035529 Prdm4 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1 PR domain containing 4 protein-coding common_peak2_67_69_-0.326507139181759_5.96602944735409_0.595144600872403-3 chr17 26604676 26605650 + 0.595144600872403 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 43651 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_67_69_-0.326507139181759_5.96602944735409_0.595144600872403 chr10 95323461 95324069 + 0.595144600872403 NA promoter-TSS (NM_001330138) promoter-TSS (NM_001330138) -56 NM_001330138 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak1_67_69_-0.326507139181759_5.96602944735409_0.595144600872403-3 chr5 112342616 112343593 + 0.595144600872403 NA promoter-TSS (NM_027323) promoter-TSS (NM_027323) 9 NM_138646 192232 Mm.238043 NM_138646 ENSMUSG00000042328 Hps4 2010205O06Rik|AU040608|BLOC-3|C130020P05Rik|le|mKIAA1667 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 protein-coding common_peak2_67_69_-0.326507139181759_5.96602944735409_0.595144600872403 chr10 80160076 80160650 + 0.595144600872403 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -7476 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_314_283_-0.150829881650456_8.07433217867945_0.594845596105203 chr1 64119164 64121439 + 0.594845596105203 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 1088 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak2_276_201_0.156548360564121_7.73648566303386_0.594793047336396 chr16 11253139 11255131 + 0.594793047336396 NA TTS (NR_035466) TTS (NR_035466) 190 NM_001130008 14852 Mm.325827 NM_146066 ENSMUSG00000062203 Gspt1 AI314175|AI326449|AV307676|C79774|G1st|Gst-1 G1 to S phase transition 1 protein-coding common_peak1_193_138_0.185614502114326_7.21174832378067_0.594695900925995 chr9 44733423 44735218 + 0.594695900925995 NA intron (NM_153537, intron 1 of 21) CpG 878 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_187_174_-0.191659767676763_7.35538122799395_0.594081574137176 chr15 78926552 78928382 + 0.594081574137176 NA intron (NM_008495, intron 1 of 3) intron (NM_008495, intron 1 of 3) 742 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak2_110_76_0.237954823016752_6.38576395220328_0.593988304462041 chr9 107871949 107872726 + 0.593988304462041 NA intron (NM_029169, intron 1 of 20) intron (NM_029169, intron 1 of 20) 482 NM_011251 19654 Mm.139926 NM_011251 ENSMUSG00000032582 Rbm6 4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015 RNA binding motif protein 6 protein-coding common_peak2_92_91_-0.272276814276776_6.38742354891862_0.593988304462017 chr1 135312747 135314151 + 0.593988304462017 NA intron (NM_011590, intron 1 of 5) intron (NM_011590, intron 1 of 5) 288 NM_011590 21854 Mm.2368 NM_011590 ENSMUSG00000062580 Timm17a Tim17a|mTim17a translocase of inner mitochondrial membrane 17a protein-coding common_peak1_92_91_-0.272276814276776_6.38742354891862_0.593988304462017 chr2 180224467 180225830 + 0.593988304462017 NA intron (NM_001081171, intron 1 of 78) CpG 711 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_120_116_-0.24205395860708_6.74933774027986_0.593221197044875 chr11 22858972 22860501 + 0.593221197044875 NA promoter-TSS (NM_016888) promoter-TSS (NM_016888) -1 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_120_116_-0.24205395860708_6.74933774027986_0.593221197044875 chr18 36405022 36406082 + 0.593221197044875 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 48943 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_141_99_0.213709572358764_6.75071097595411_0.59322119704485 chr16 38522036 38523241 + 0.59322119704485 NA promoter-TSS (NM_024273) promoter-TSS (NM_024273) 25 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding common_peak1_97_66_0.260213973335039_6.19619617712529_0.592991123196214-3 chr15 103006653 103007962 + 0.592991123196214 NA Intergenic Intergenic -2255 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding common_peak2_80_80_-0.286467549757011_6.19661622800612_0.592991123196214 chr11 95384573 95385176 + 0.592991123196214 NA promoter-TSS (NM_001357797) promoter-TSS (NM_001357797) 18 NM_001357797 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 UGTrel1|Ugalt2 solute carrier family 35, member B1 protein-coding common_peak2_80_80_-0.286467549757011_6.19661622800612_0.592991123196214-4 chr17 45685450 45686752 + 0.592991123196214 NA promoter-TSS (NM_026732) promoter-TSS (NM_026732) 117 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding common_peak2_79_80_-0.304263019059438_6.18771849335491_0.592991123196214 chr2 60880896 60881378 + 0.592991123196214 NA exon (NM_001141931, exon 1 of 14) exon (NM_001141931, exon 1 of 14) 301 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_80_80_-0.286467549757011_6.19661622800612_0.592991123196214-2 chr13 33935139 33936274 + 0.592991123196214 NA promoter-TSS (NR_040707) promoter-TSS (NR_040707) -326 NR_040707 68808 Mm.443347 NR_040707 ENSMUSG00000085457 1110046J04Rik - RIKEN cDNA 1110046J04 gene ncRNA common_peak2_80_80_-0.286467549757011_6.19661622800612_0.592991123196214-3 chr15 59794908 59795724 + 0.592991123196214 NA promoter-TSS (NR_045076) promoter-TSS (NR_045076) -357 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_80_80_-0.286467549757011_6.19661622800612_0.592991123196214 chr11 88172143 88173001 + 0.592991123196214 NA intron (NM_001172099, intron 1 of 9) intron (NM_001172099, intron 1 of 9) 3007 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_97_66_0.260213973335039_6.19619617712529_0.592991123196214 chr4 45504542 45505953 + 0.592991123196214 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 25581 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_97_66_0.260213973335039_6.19619617712529_0.592991123196214-2 chr10 127311312 127312073 + 0.592991123196214 NA promoter-TSS (NM_001171582) promoter-TSS (NM_001171582) 94 NM_001003913 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding common_peak2_79_80_-0.304263019059438_6.18771849335491_0.592991123196214-2 chr6 88926476 88927238 + 0.592991123196214 NA Intergenic Intergenic 24606 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_97_66_0.260213973335039_6.19619617712529_0.592991123196214 chr1 155074005 155074882 + 0.592991123196214 NA intron (NR_151545, intron 3 of 6) intron (NR_151545, intron 3 of 6) 8821 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak1_520_389_0.112397035782116_8.66352883164067_0.592692935431727 chr2 72284787 72288851 + 0.592692935431727 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 1118 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_176_125_0.195901784476972_7.0752308157384_0.592685996350274 chr19 55315697 55316764 + 0.592685996350274 NA promoter-TSS (NM_001033573) promoter-TSS (NM_001033573) 173 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak1_176_125_0.195901784476972_7.0752308157384_0.592685996350274 chr7 25753190 25754898 + 0.592685996350274 NA intron (NM_001360789, intron 1 of 14) intron (NM_001360789, intron 1 of 14) 715 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak2_188_175_-0.192280697736252_7.36329126976917_0.592297672489194 chr5 90365268 90367387 + 0.592297672489194 NA promoter-TSS (NM_030886) promoter-TSS (NM_030886) -142 NM_198010 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-8 chr4 46195852 46196223 + 0.591915184368645 NA intron (NM_011728, intron 1 of 5) CpG 274 NM_011728 22590 Mm.247036 NM_011728 ENSMUSG00000028329 Xpa AI573865|Xpac xeroderma pigmentosum, complementation group A protein-coding unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-3 chr15 100303839 100304449 + 0.591915184368645 NA promoter-TSS (NM_027334) promoter-TSS (NM_027334) -673 NM_027334 70152 Mm.488086 NM_027334 ENSMUSG00000054619 Mettl7a1 2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1 methyltransferase like 7A1 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-6 chr3 37882859 37883137 + 0.591915184368645 NA Intergenic Intergenic -15815 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-8 chr9 14156861 14157524 + 0.591915184368645 NA Intergenic Intergenic -119109 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-7 chr2 164437087 164437338 + 0.591915184368645 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 5976 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645 chr1 183081831 183082136 + 0.591915184368645 NA Intergenic Intergenic 65574 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-10 chr7 24112440 24112804 + 0.591915184368645 NA intron (NM_021307, intron 1 of 4) intron (NM_021307, intron 1 of 4) 302 NM_021307 57745 Mm.82678 NM_021307 ENSMUSG00000052675 Zfp112 Znf112|Znf228 zinc finger protein 112 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-7 chr4 57568817 57569125 + 0.591915184368645 NA intron (NM_001304544, intron 1 of 8) intron (NM_001304544, intron 1 of 8) 723 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-4 chr18 35044647 35045238 + 0.591915184368645 NA Intergenic Intergenic -73970 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-6 chr18 60892711 60893005 + 0.591915184368645 NA Intergenic ORR1F|LTR|ERVL-MaLR -19382 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645 chr1 72243923 72244163 + 0.591915184368645 NA promoter-TSS (NR_155355) promoter-TSS (NR_155355) 50 NR_155355 320933 Mm.440953 NR_155355 D230017M19Rik B930094L07Rik RIKEN cDNA D230017M19 gene ncRNA common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-2 chr10 80406384 80406724 + 0.591915184368645 NA intron (NM_025650, intron 1 of 2) intron (NM_025650, intron 1 of 2) 267 NM_025650 66594 Mm.379119 NM_025650 ENSMUSG00000020163 Uqcr11 0710008D09Rik|AL022707|Uqcr ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-5 chr19 4257337 4257707 + 0.591915184368645 NA Intergenic Intergenic 6356 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-3 chr12 78748117 78748569 + 0.591915184368645 NA promoter-TSS (NM_019579) promoter-TSS (NM_019579) -604 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-11 chr7 65468697 65469164 + 0.591915184368645 NA Intergenic Intergenic -97686 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-4 chr18 43436319 43436739 + 0.591915184368645 NA intron (NM_001291455, intron 1 of 13) intron (NM_001291455, intron 1 of 13) 1757 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-4 chr13 30973682 30973998 + 0.591915184368645 NA intron (NM_025588, intron 1 of 27) CpG 207 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-7 chr8 70523351 70523736 + 0.591915184368645 NA promoter-TSS (NM_029366) promoter-TSS (NM_029366) -363 NM_029366 75620 Mm.482129 NM_029366 ENSMUSG00000055553 Kxd1 0610030B01Rik|2810422J05Rik|C78305 KxDL motif containing 1 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-8 chr5 34998205 34998559 + 0.591915184368645 NA promoter-TSS (NM_001163512) promoter-TSS (NM_001163512) -696 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645 chr1 64941503 64941825 + 0.591915184368645 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 15160 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-3 chr10 93756249 93756982 + 0.591915184368645 NA Intergenic Intergenic -73293 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-6 chr2 148478070 148478407 + 0.591915184368645 NA Intergenic Intergenic -34703 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-9 chr5 64816618 64817162 + 0.591915184368645 NA intron (NM_008453, intron 2 of 5) intron (NM_008453, intron 2 of 5) 13367 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-9 chr9 116383765 116384118 + 0.591915184368645 NA Intergenic Intergenic 194761 NR_152204 100043817 Mm.404276 NR_152204 Gm4668 - predicted gene 4668 ncRNA unique_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-2 chr11 60109917 60110541 + 0.591915184368645 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 5216 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-2 chr10 59896235 59896651 + 0.591915184368645 NA exon (NM_019965, exon 8 of 9) exon (NM_019965, exon 8 of 9) 16852 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_33_20_0.417513434557691_4.60107414005761_0.591915184368645-5 chr17 87169858 87170225 + 0.591915184368645 NA Intergenic Intergenic 24901 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-5 chr19 23135261 23135567 + 0.591915184368645 NA Intergenic CpG -5812 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-12 chr7 97071076 97071405 + 0.591915184368645 NA Intergenic Intergenic -10511 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_33_20_0.417513434557691_4.60107414005761_0.591915184368645-13 chr9 116383779 116384131 + 0.591915184368645 NA Intergenic Intergenic 194775 NR_152204 100043817 Mm.404276 NR_152204 Gm4668 - predicted gene 4668 ncRNA common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-10 chr19 16920953 16921362 + 0.591915184368642 NA Intergenic Intergenic -34961 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-4 chr1 175880496 175880769 + 0.591915184368642 NA promoter-TSS (NM_012012) promoter-TSS (NM_012012) -146 NM_012012 26909 Mm.283046 NM_012012 ENSMUSG00000039748 Exo1 5730442G03Rik|Msa exonuclease 1 protein-coding unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-6 chr8 95488651 95488866 + 0.591915184368642 NA promoter-TSS (NM_009974) promoter-TSS (NM_009974) 62 NM_009974 13000 Mm.51136 NM_009974 ENSMUSG00000046707 Csnk2a2 1110035J23Rik|C77789|CK2 casein kinase 2, alpha prime polypeptide protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-4 chr13 5891276 5891732 + 0.591915184368642 NA Intergenic Intergenic 30015 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-5 chr13 84222422 84222774 + 0.591915184368642 NA promoter-TSS (NR_138587) promoter-TSS (NR_138587) 302 NM_175187 72745 Mm.295063 NM_175187 ENSMUSG00000035762 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-6 chr10 88500999 88501357 + 0.591915184368642 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 2792 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-10 chr9 119323064 119323440 + 0.591915184368642 NA promoter-TSS (NR_045693) promoter-TSS (NR_045693) -825 NM_133985 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-12 chr4 105960869 105961164 + 0.591915184368642 NA Intergenic Intergenic -280197 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-5 chr10 79855962 79856324 + 0.591915184368642 NA intron (NM_001077363, intron 1 of 13) intron (NM_001077363, intron 1 of 13) -1172 NR_029447 414101 Mm.401339 NR_029447 ENSMUSG00000091994 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-3 chr15 58927892 58928421 + 0.591915184368642 NA intron (NM_175151, intron 2 of 11) B3A|SINE|B2 5574 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-2 chr11 68314296 68314566 + 0.591915184368642 NA intron (NM_008744, intron 2 of 6) intron (NM_008744, intron 2 of 6) 72395 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642 chr1 12285146 12285553 + 0.591915184368642 NA Intergenic Intergenic -140637 NR_105759 102465961 NR_105759 ENSMUSG00000098555 Mir6341 Gm27262|mmu-mir-6341 microRNA 6341 ncRNA common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-3 chr11 97419891 97420148 + 0.591915184368642 NA Intergenic Intergenic -30141 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-2 chr1 155082894 155083397 + 0.591915184368642 NA non-coding (NR_151545, exon 1 of 7) non-coding (NR_151545, exon 1 of 7) 119 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-7 chr11 119685828 119686183 + 0.591915184368642 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 83100 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-8 chr5 138754580 138754849 + 0.591915184368642 NA promoter-TSS (NM_030565) promoter-TSS (NM_030565) -367 NM_030565 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-14 chr5 13400143 13400771 + 0.591915184368642 NA intron (NM_001243073, intron 2 of 17) intron (NM_001243073, intron 2 of 17) 1148 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-9 chr6 113689800 113690116 + 0.591915184368642 NA intron (NM_001113553, intron 10 of 11) B1F|SINE|Alu -7092 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-3 chr1 120121256 120121697 + 0.591915184368642 NA promoter-TSS (NM_007830) promoter-TSS (NM_007830) 289 NM_001172074 73103 Mm.271602 NM_028439 ENSMUSG00000026388 3110009E18Rik - RIKEN cDNA 3110009E18 gene protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-13 chr4 146611167 146611479 + 0.591915184368642 NA Intergenic Intergenic -64450 NR_045468 67524 Mm.444300 NR_045468 ENSMUSG00000086046 1700095A21Rik - RIKEN cDNA 1700095A21 gene ncRNA unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-5 chr7 113260829 113261327 + 0.591915184368642 NA intron (NM_001243048, intron 2 of 16) intron (NM_001243048, intron 2 of 16) 53613 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642 chr1 75393666 75394124 + 0.591915184368642 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) -6190 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-9 chr16 85803136 85803637 + 0.591915184368642 NA promoter-TSS (NM_009621) promoter-TSS (NM_009621) -273 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-2 chr1 75521567 75521970 + 0.591915184368642 NA 5' UTR (NM_027886, exon 2 of 25) 5' UTR (NM_027886, exon 2 of 25) 239 NM_027886 71728 Mm.312650 NM_027886 ENSMUSG00000026213 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-6 chr2 130840313 130840520 + 0.591915184368642 NA promoter-TSS (NM_001311147) promoter-TSS (NM_001311147) -271 NM_029432 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-4 chr3 108199907 108200393 + 0.591915184368642 NA exon (NM_001081320, exon 2 of 3) exon (NM_001081320, exon 2 of 3) 684 NM_028061 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding common_peak1_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-7 chr2 148672687 148673020 + 0.591915184368642 NA intron (NM_019761, intron 1 of 1) CpG 212 NM_001110159 56488 Mm.34663 NM_019761 ENSMUSG00000036992 Nxt1 1110001N02Rik NTF2-related export protein 1 protein-coding unique_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-7 chrX 12079228 12079771 + 0.591915184368642 NA intron (NM_001168321, intron 1 of 13) CpG 1054 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-11 chr19 38610607 38610974 + 0.591915184368642 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 86593 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642 chr1 9700669 9701097 + 0.591915184368642 NA promoter-TSS (NM_001290397) promoter-TSS (NM_001290397) -674 NM_008651 17864 Mm.479 NM_008651 ENSMUSG00000025912 Mybl1 A-myb|G1-419-6|repro9 myeloblastosis oncogene-like 1 protein-coding common_peak2_23_28_-0.547105348682322_4.58442832078641_0.591915184368642-8 chr13 5822193 5822729 + 0.591915184368642 NA Intergenic Intergenic 35631 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_72_48_0.289705591450718_5.75956263984057_0.591158351830189 chr1 184034844 184035619 + 0.591158351830189 NA intron (NM_022019, intron 1 of 3) intron (NM_022019, intron 1 of 3) 850 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_72_48_0.289705591450718_5.75956263984057_0.591158351830189-2 chr2 152105566 152106087 + 0.591158351830189 NA exon (NM_029688, exon 1 of 2) exon (NM_029688, exon 1 of 2) 302 NM_029688 76650 Mm.218639 NM_029688 ENSMUSG00000032802 Srxn1 1700127B04Rik|AI854065|AW488194|Npn3|Srx|Srx1|TX01 sulfiredoxin 1 homolog (S. cerevisiae) protein-coding common_peak1_72_48_0.289705591450718_5.75956263984057_0.591158351830189-3 chr4 136440769 136441726 + 0.591158351830189 NA intron (NM_001285484, intron 1 of 1) ID_B1|SINE|B4 16635 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak1_72_48_0.289705591450718_5.75956263984057_0.591158351830189-4 chr4 145233012 145234075 + 0.591158351830189 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 13327 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_72_48_0.289705591450718_5.75956263984057_0.591158351830189 chr1 185328802 185329669 + 0.591158351830189 NA exon (NM_198653, exon 1 of 23) exon (NM_198653, exon 1 of 23) 166 NM_198653 381314 Mm.275841 NM_198653 ENSMUSG00000026618 Iars2 2010002H18Rik|C79125 isoleucine-tRNA synthetase 2, mitochondrial protein-coding common_peak2_72_48_0.289705591450718_5.75956263984057_0.591158351830189-2 chr12 78861103 78861531 + 0.591158351830189 NA promoter-TSS (NM_026114) promoter-TSS (NM_026114) 321 NM_023721 73834 Mm.311549 NM_023721 ENSMUSG00000021114 Atp6v1d 1110004P10Rik|Atp6m|VATD|Vma8 ATPase, H+ transporting, lysosomal V1 subunit D protein-coding common_peak2_58_60_-0.331336252240207_5.76506921144278_0.591158351830177-2 chr19 10896073 10896635 + 0.591158351830177 NA intron (NM_134129, intron 1 of 15) intron (NM_134129, intron 1 of 15) 1123 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak1_58_60_-0.331336252240207_5.76506921144278_0.591158351830177 chr10 63024110 63025256 + 0.591158351830177 NA promoter-TSS (NM_001079824) promoter-TSS (NM_001079824) 171 NM_026085 67307 Mm.368563 NM_026085 ENSMUSG00000020072 Pbld2 3110049J23Rik|Mawbp phenazine biosynthesis-like protein domain containing 2 protein-coding common_peak1_58_60_-0.331336252240207_5.76506921144278_0.591158351830177-4 chr7 140035986 140036625 + 0.591158351830177 NA promoter-TSS (NM_027201) promoter-TSS (NM_027201) 45 NM_133755 74237 Mm.40888 NM_133755 ENSMUSG00000025474 Tubgcp2 1700022B05Rik tubulin, gamma complex associated protein 2 protein-coding common_peak2_57_60_-0.35582431618562_5.75282517947008_0.591158351830177 chr17 24936346 24936948 + 0.591158351830177 NA exon (NM_001163447, exon 1 of 32) exon (NM_001163447, exon 1 of 32) 330 NM_001163448 30957 Mm.43081 NM_013931 ENSMUSG00000024163 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 protein-coding common_peak1_57_60_-0.35582431618562_5.75282517947008_0.591158351830177 chr10 94687883 94688589 + 0.591158351830177 NA promoter-TSS (NM_029852) promoter-TSS (NM_029852) 377 NR_015524 67723 Mm.116284 NR_015524 Cep83os 4932415G12Rik|Ccdc41os1 centrosomal protein 83, opposite strand ncRNA common_peak1_58_60_-0.331336252240207_5.76506921144278_0.591158351830177-3 chr11 69881543 69882054 + 0.591158351830177 NA promoter-TSS (NM_153143) promoter-TSS (NM_153143) 296 NR_105889 102466208 NR_105889 ENSMUSG00000104996 Mir6924 mmu-mir-6924 microRNA 6924 ncRNA common_peak1_58_60_-0.331336252240207_5.76506921144278_0.591158351830177-2 chr10 78412357 78412932 + 0.591158351830177 NA intron (NM_010925, intron 1 of 12) CpG 399 NM_010925 18114 Mm.38344 NM_010925 ENSMUSG00000061032 Rrp1 AL033305|AL033306|AU018604|NNP-1|Nnp1 ribosomal RNA processing 1 homolog (S. cerevisiae) protein-coding common_peak2_58_60_-0.331336252240207_5.76506921144278_0.591158351830177 chr17 6782458 6783344 + 0.591158351830177 NA promoter-TSS (NM_009510) promoter-TSS (NM_009510) -121 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_107_104_-0.248753646339208_6.58986869449652_0.590895688354842 chr8 104340327 104341408 + 0.590895688354842 NA exon (NM_024217, exon 1 of 5) exon (NM_024217, exon 1 of 5) 273 NM_024217 68119 Mm.390108 NM_024217 ENSMUSG00000031875 Cmtm3 9430096L06Rik|AI413895|BNAS2|Cklfsf3 CKLF-like MARVEL transmembrane domain containing 3 protein-coding common_peak2_171_160_-0.198784307051673_7.23152472458878_0.590774498860861 chr1 84838829 84840445 + 0.590774498860861 NA promoter-TSS (NM_025386) promoter-TSS (NM_025386) -204 NM_025386 66153 Mm.381192 NM_025386 ENSMUSG00000073633 Fbxo36 0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e F-box protein 36 protein-coding common_peak2_250_228_-0.165639348575748_7.75638411380907_0.590708769448602 chr19 36833750 36835520 + 0.590708769448602 NA exon (NM_001163635, exon 1 of 27) exon (NM_001163635, exon 1 of 27) 403 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding common_peak1_215_155_0.173034672891422_7.37191955530796_0.590535372364452 chr5 65389918 65391865 + 0.590535372364452 NA promoter-TSS (NM_001310612) promoter-TSS (NM_001310612) 540 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding common_peak2_153_145_-0.216045086282072_7.08180201573898_0.590530002523229 chr4 58911151 58912660 + 0.590530002523229 NA promoter-TSS (NM_001355697) promoter-TSS (NM_001355697) 25 NM_001355697 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|Ecpas|mKIAA0368 expressed sequence AI314180 protein-coding common_peak1_142_100_0.209407070509338_6.76291501800646_0.590522633917893 chr1 189726470 189727949 + 0.590522633917893 NA Intergenic Intergenic -1059 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak1_142_100_0.209407070509338_6.76291501800646_0.590522633917893-2 chr8 122154840 122156250 + 0.590522633917893 NA Intergenic Intergenic -126596 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_93_92_-0.272552487379221_6.40288256741842_0.590512137238174 chr12 100186811 100187471 + 0.590512137238174 NA promoter-TSS (NR_045282) promoter-TSS (NR_045282) -827 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 - predicted gene 10433 ncRNA common_peak1_93_92_-0.272552487379221_6.40288256741842_0.590512137238174 chr9 65011057 65012522 + 0.590512137238174 NA intron (NM_021345, intron 1 of 10) intron (NM_021345, intron 1 of 10) 9928 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak2_112_77_0.244920482798003_6.40786246026125_0.590512137238174-2 chr2 77945537 77946396 + 0.590512137238174 NA intron (NM_030560, intron 1 of 20) CpG 390 NM_001290740 80744 Mm.288151 NM_030560 ENSMUSG00000027014 Cwc22 AA684037|AI173004|AL022752|B230213M24|mKIAA1604 CWC22 spliceosome-associated protein protein-coding common_peak1_112_77_0.244920482798003_6.40786246026125_0.590512137238174 chr1 160213041 160213966 + 0.590512137238174 NA promoter-TSS (NM_009786) promoter-TSS (NM_009786) -611 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak1_111_77_0.232186915783188_6.40149567675384_0.590512137238174 chr15 101246600 101247466 + 0.590512137238174 NA Intergenic Intergenic -19813 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|NUR77-1|NUR77-2|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak2_112_77_0.244920482798003_6.40786246026125_0.590512137238174 chr11 68901631 68902463 + 0.590512137238174 NA intron (NM_009080, intron 1 of 3) intron (NM_009080, intron 1 of 3) 458 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 - ribosomal protein L26 pseudogene pseudo common_peak1_111_77_0.232186915783188_6.40149567675384_0.590512137238174-2 chr18 32163050 32163872 + 0.590512137238174 NA 5' UTR (NM_011946, exon 1 of 17) 5' UTR (NM_011946, exon 1 of 17) 372 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak2_68_70_-0.326058215480973_5.9867180117642_0.590496457913116-2 chr3 138488879 138489409 + 0.590496457913116 NA intron (NM_175224, intron 1 of 10) CpG 238 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding common_peak2_68_70_-0.326058215480973_5.9867180117642_0.590496457913116 chr19 23273108 23273872 + 0.590496457913116 NA promoter-TSS (NM_001252685) promoter-TSS (NM_001252685) 407 NM_153808 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_68_70_-0.326058215480973_5.9867180117642_0.590496457913116 chr8 103220818 103221811 + 0.590496457913116 NA Intergenic Intergenic 126220 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_68_70_-0.326058215480973_5.9867180117642_0.590496457913116-3 chr7 122066397 122067030 + 0.590496457913116 NA promoter-TSS (NM_138589) promoter-TSS (NM_138589) 373 NM_026140 67417 Mm.45171 NM_026140 ENSMUSG00000030871 Ears2 3230401I01Rik|mKIAA1970 glutamyl-tRNA synthetase 2, mitochondrial protein-coding common_peak2_69_70_-0.305446106532123_5.99702406623862_0.590496457913116-2 chr7 73538036 73538999 + 0.590496457913116 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 3229 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_69_70_-0.305446106532123_5.99702406623862_0.590496457913116 chr15 97821681 97822521 + 0.590496457913116 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -7238 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_84_57_0.264451781389514_5.99020688582233_0.590496457913103 chr15 61157962 61158926 + 0.590496457913103 NA Intergenic Intergenic -237174 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak1_85_57_0.281206555508617_5.99858427288188_0.590496457913103-3 chr3 28721231 28721902 + 0.590496457913103 NA intron (NM_031197, intron 7 of 10) intron (NM_031197, intron 7 of 10) 23663 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding common_peak1_85_57_0.281206555508617_5.99858427288188_0.590496457913103 chr11 117809376 117810469 + 0.590496457913103 NA intron (NM_009304, intron 1 of 3) CpG 255 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak1_85_57_0.281206555508617_5.99858427288188_0.590496457913103-4 chr3 108561495 108562390 + 0.590496457913103 NA intron (NM_026198, intron 1 of 2) intron (NM_026198, intron 1 of 2) 524 NM_026198 67495 Mm.32615 NM_026198 ENSMUSG00000068732 Tmem167b 2010200O16Rik transmembrane protein 167B protein-coding common_peak1_85_57_0.281206555508617_5.99858427288188_0.590496457913103-2 chr15 102942941 102943433 + 0.590496457913103 NA TTS (NR_047528) TTS (NR_047528) 4759 NR_047528 100503872 Mm.383980 NR_047528 ENSMUSG00000086903 Hotair Gm16258 HOX transcript antisense RNA (non-protein coding) ncRNA common_peak2_84_57_0.264451781389514_5.99020688582233_0.590496457913103-2 chr3 122208228 122208861 + 0.590496457913103 NA Intergenic Intergenic -37013 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak2_85_57_0.281206555508617_5.99858427288188_0.590496457913103 chr10 82985676 82986628 + 0.590496457913103 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 655 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_61_40_0.312897534934698_5.51400077208543_0.590471533980013 chr10 79856109 79857134 + 0.590471533980013 NA intron (NM_001077363, intron 2 of 13) intron (NM_001077363, intron 2 of 13) -1650 NR_029447 414101 Mm.401339 NR_029447 ENSMUSG00000091994 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA common_peak1_48_51_-0.367081574775037_5.51689893075357_0.590471533980013-2 chr11 79993212 79993870 + 0.590471533980013 NA exon (NM_001163018, exon 1 of 15) exon (NM_001163018, exon 1 of 15) 435 NM_199196 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 SUZ12 polycomb repressive complex 2 subunit protein-coding common_peak2_47_51_-0.396619051269086_5.50213019250655_0.590471533980013-5 chr5 32192438 32192865 + 0.590471533980013 NA Intergenic Intergenic -40057 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_61_40_0.312897534934698_5.51400077208543_0.590471533980013-4 chr8 126391952 126392303 + 0.590471533980013 NA intron (NM_175434, intron 6 of 6) intron (NM_175434, intron 6 of 6) -30374 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak2_61_40_0.312897534934698_5.51400077208543_0.590471533980013 chr19 28288817 28289337 + 0.590471533980013 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -277911 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_47_51_-0.396619051269086_5.50213019250655_0.590471533980013-2 chr13 51651395 51652051 + 0.590471533980013 NA promoter-TSS (NM_029279) promoter-TSS (NM_029279) 15 NM_029279 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_48_51_-0.367081574775037_5.51689893075357_0.590471533980013-4 chr2 6129551 6130090 + 0.590471533980013 NA intron (NM_144883, intron 1 of 3) CpG 365 NM_144883 227545 Mm.133542 NM_144883 ENSMUSG00000045319 Proser2 5430407P10Rik|AU067770 proline and serine rich 2 protein-coding common_peak2_48_51_-0.367081574775037_5.51689893075357_0.590471533980013-2 chr15 101329446 101330305 + 0.590471533980013 NA Intergenic Intergenic 36663 NR_033803 77717 Mm.391998 NR_033803 ENSMUSG00000075408 6030408B16Rik AI225877 RIKEN cDNA 6030408B16 gene ncRNA unique_peak1_61_40_0.312897534934698_5.51400077208543_0.590471533980013 chr11 44014061 44014884 + 0.590471533980013 NA Intergenic Intergenic -113235 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_47_51_-0.396619051269086_5.50213019250655_0.590471533980013-4 chr4 129600721 129601129 + 0.590471533980013 NA promoter-TSS (NM_018799) promoter-TSS (NM_018799) 218 NM_029748 76799 Mm.293096 NM_029748 ENSMUSG00000028797 Tmem234 1500002D11Rik|2510006D16Rik|4933407D05Rik transmembrane protein 234 protein-coding common_peak2_48_51_-0.367081574775037_5.51689893075357_0.590471533980013 chr1 132326097 132326773 + 0.590471533980013 NA intron (NM_001195025, intron 3 of 7) intron (NM_001195025, intron 3 of 7) 10310 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_47_51_-0.396619051269086_5.50213019250655_0.590471533980013 chr9 20492306 20492931 + 0.590471533980013 NA 5' UTR (NM_146221, exon 1 of 7) 5' UTR (NM_146221, exon 1 of 7) 128 NM_146221 235028 Mm.297660 NM_146221 ENSMUSG00000059475 Zfp426 2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237 zinc finger protein 426 protein-coding common_peak1_48_51_-0.367081574775037_5.51689893075357_0.590471533980013-5 chr9 50886569 50887345 + 0.590471533980013 NA intron (NM_001286553, intron 15 of 16) intron (NM_001286553, intron 15 of 16) 30033 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_48_51_-0.367081574775037_5.51689893075357_0.590471533980013-3 chr18 66458613 66459508 + 0.590471533980013 NA intron (NM_021451, intron 1 of 2) intron (NM_021451, intron 1 of 2) 456 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding common_peak1_48_51_-0.367081574775037_5.51689893075357_0.590471533980013-3 chr19 18816353 18816904 + 0.590471533980013 NA intron (NM_153417, intron 17 of 38) intron (NM_153417, intron 17 of 38) 66645 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_47_51_-0.396619051269086_5.50213019250655_0.590471533980013-6 chr5 142794542 142795075 + 0.590471533980013 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 22579 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_47_51_-0.396619051269086_5.50213019250655_0.590471533980013-3 chr19 38033148 38033820 + 0.590471533980013 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 10093 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_61_40_0.312897534934698_5.51400077208543_0.590471533980013-2 chr17 35868503 35869337 + 0.590471533980013 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 2305 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak1_48_51_-0.367081574775037_5.51689893075357_0.590471533980013 chr1 56972544 56972981 + 0.590471533980013 NA non-coding (NR_024325, exon 1 of 1) non-coding (NR_024325, exon 1 of 1) 1293 NR_024326 329160 Mm.419039 NR_024325 ENSMUSG00000087022 9130024F11Rik B530002L08|EG329160 RIKEN cDNA 9130024F11 gene ncRNA common_peak2_47_51_-0.396619051269086_5.50213019250655_0.590471533980013 chr10 97093266 97093926 + 0.590471533980013 NA Intergenic Intergenic 57828 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak1_61_40_0.312897534934698_5.51400077208543_0.590471533980013-3 chr6 121066226 121066861 + 0.590471533980013 NA intron (NR_138098, intron 1 of 1) intron (NR_138098, intron 1 of 1) 2079 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-6 chr4 141277699 141278085 + 0.590428395010953 NA promoter-TSS (NR_151527) promoter-TSS (NR_151527) -547 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-7 chr4 145781605 145781923 + 0.590428395010953 NA intron (NM_001083918, intron 1 of 6) intron (NM_001083918, intron 1 of 6) 221 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-2 chr11 86649452 86649764 + 0.590428395010953 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 21667 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-4 chr2 5063623 5063997 + 0.590428395010953 NA intron (NM_001356487, intron 1 of 13) CpG 307 NM_181848 71648 Mm.116942 NM_181848 ENSMUSG00000026672 Optn 4930441O07Rik|FIP2|HYPL|NRP optineurin protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953 chr11 8590422 8590784 + 0.590428395010953 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 73932 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953 chr8 105827409 105827752 + 0.590428395010953 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) -164 NM_024445 72236 Mm.386810 NM_024445 ENSMUSG00000031893 Tsnaxip1 1700016K08Rik|TXI1 translin-associated factor X (Tsnax) interacting protein 1 protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-7 chr5 104406571 104407091 + 0.590428395010953 NA Intergenic Intergenic -28280 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_41_26_0.357647193855912_4.93371109909142_0.590428395010953 chr4 41569014 41569359 + 0.590428395010953 NA promoter-TSS (NM_175138) promoter-TSS (NM_175138) 341 NM_001159583 71901 Mm.39215 NM_027993 ENSMUSG00000028439 Fam219a 2310028H24Rik family with sequence similarity 219, member A protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-8 chr6 6956050 6956619 + 0.590428395010953 NA intron (NM_001077713, intron 1 of 1) intron (NM_001077713, intron 1 of 1) 316 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-5 chr3 96727048 96727628 + 0.590428395010953 NA promoter-TSS (NM_026406) promoter-TSS (NM_026406) 101 NM_028925 74414 Mm.276043 NM_028925 ENSMUSG00000028099 Polr3c 4933407E01Rik|RPC3|RPC62 polymerase (RNA) III (DNA directed) polypeptide C protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-4 chr14 76699128 76699637 + 0.590428395010953 NA Intergenic Intergenic 21814 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-2 chr18 77949044 77949807 + 0.590428395010953 NA intron (NM_001195633, intron 2 of 43) MER102b|DNA|hAT-Charlie 10958 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-9 chr7 98390677 98391235 + 0.590428395010953 NA Intergenic Intergenic -29628 NM_001168539 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding unique_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-3 chr7 49558699 49559509 + 0.590428395010953 NA intron (NM_175272, intron 19 of 37) intron (NM_175272, intron 19 of 37) 77731 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_42_26_0.391355028045964_4.95056501618645_0.590428395010953 chr1 161463401 161463783 + 0.590428395010953 NA Intergenic Intergenic -31065 NM_183391 240873 Mm.276823 NM_183391 ENSMUSG00000066755 Tnfsf18 Gitrl|Tnlg2a tumor necrosis factor (ligand) superfamily, member 18 protein-coding unique_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-2 chr3 57125281 57126107 + 0.590428395010953 NA Intergenic Intergenic 176294 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_42_26_0.391355028045964_4.95056501618645_0.590428395010953-4 chr7 16419143 16419610 + 0.590428395010953 NA intron (NM_198631, intron 3 of 13) B4A|SINE|B4 18180 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953 chr14 30879569 30879979 + 0.590428395010953 NA intron (NM_181390, intron 1 of 2) intron (NM_181390, intron 1 of 2) 517 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak2_41_26_0.357647193855912_4.93371109909142_0.590428395010953-3 chr9 122865457 122865944 + 0.590428395010953 NA intron (NM_001359935, intron 1 of 6) intron (NM_001359935, intron 1 of 6) 306 NM_001359935 235682 Mm.326477 NM_173364 ENSMUSG00000047036 Zfp445 AW610627|ZNF168|Znf445|mszf29|mszf50 zinc finger protein 445 protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-8 chr4 148448603 148448921 + 0.590428395010953 NA intron (NM_020009, intron 1 of 57) CpG 180 NM_020009 56717 Mm.21158 NM_020009 ENSMUSG00000028991 Mtor 2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat mechanistic target of rapamycin kinase protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-3 chr13 74349758 74350273 + 0.590428395010953 NA promoter-TSS (NM_001168659) promoter-TSS (NM_001168659) 225 NM_023281 66945 Mm.158231 NM_023281 ENSMUSG00000021577 Sdha 1500032O14Rik|2310034D06Rik|4921513A11|C81073|FP|SDH2|SDHF succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein-coding unique_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953 chr10 127661542 127662088 + 0.590428395010953 NA TTS (NM_009284) TTS (NM_009284) 4888 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-6 chr4 133812842 133813308 + 0.590428395010953 NA Intergenic Intergenic -59464 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_41_26_0.357647193855912_4.93371109909142_0.590428395010953-5 chr2 4445127 4445618 + 0.590428395010953 NA intron (NM_001177843, intron 2 of 23) B3A|SINE|B2 44396 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_42_26_0.391355028045964_4.95056501618645_0.590428395010953-2 chr2 57156477 57156821 + 0.590428395010953 NA intron (NR_040356, intron 1 of 2) intron (NR_040356, intron 1 of 2) 25105 NR_040356 767815 Mm.188065 NR_040356 ENSMUSG00000084938 BB557941 - expressed sequence BB557941 ncRNA common_peak2_41_26_0.357647193855912_4.93371109909142_0.590428395010953-2 chr6 58842539 58842883 + 0.590428395010953 NA intron (NM_028705, intron 1 of 24) intron (NM_028705, intron 1 of 24) 9011 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_42_26_0.391355028045964_4.95056501618645_0.590428395010953-3 chr18 83827015 83827468 + 0.590428395010953 NA Intergenic Intergenic 259321 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak2_42_26_0.391355028045964_4.95056501618645_0.590428395010953-3 chr3 88324975 88325318 + 0.590428395010953 NA exon (NM_020003, exon 1 of 6) exon (NM_020003, exon 1 of 6) 123 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-4 chr17 47502038 47502293 + 0.590428395010947 NA intron (NM_001356290, intron 1 of 7) CpG 126 NM_001356290 63856 Mm.275901 NM_022015 ENSMUSG00000023980 Taf8 AW260255|Tbn TATA-box binding protein associated factor 8 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947 chr11 54522247 54522655 + 0.590428395010947 NA promoter-TSS (NM_175258) promoter-TSS (NM_175258) -394 NM_001252494 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-2 chr10 53629419 53629928 + 0.590428395010947 NA intron (NM_027830, intron 2 of 13) CpG 766 NM_027830 71567 Mm.278221 NM_027830 ENSMUSG00000058298 Mcm9 9030408O17Rik|Gm235|Mcmdc1 minichromosome maintenance 9 homologous recombination repair factor protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-7 chr3 145887949 145888331 + 0.590428395010947 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -36122 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-2 chr9 104981623 104982145 + 0.590428395010947 NA intron (NM_028719, intron 7 of 15) intron (NM_028719, intron 7 of 15) -71384 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-11 chr9 121705100 121705523 + 0.590428395010947 NA promoter-TSS (NM_178677) promoter-TSS (NM_178677) -282 NM_001164562 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-3 chr11 70982559 70982950 + 0.590428395010947 NA exon (NM_007573, exon 1 of 6) exon (NM_007573, exon 1 of 6) 272 NM_007573 12261 Mm.30049 NM_007573 ENSMUSG00000018446 C1qbp AA407365|AA986492|D11Wsu182e|HABP1|P32|gC1qBP complement component 1, q subcomponent binding protein protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-5 chr2 112368109 112368474 + 0.590428395010947 NA promoter-TSS (NM_026519) promoter-TSS (NM_026519) -264 NM_026519 68032 Mm.220942 NM_026519 ENSMUSG00000027131 Emc4 2610318K02Rik|Tmem85 ER membrane protein complex subunit 4 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-11 chr9 72076522 72077028 + 0.590428395010947 NA intron (NM_011544, intron 3 of 20) intron (NM_011544, intron 3 of 20) 34426 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_31_35_-0.446939936797761_4.94645503304343_0.590428395010947 chr12 8379141 8379523 + 0.590428395010947 NA Intergenic Intergenic 65899 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-9 chr7 98513993 98514409 + 0.590428395010947 NA Intergenic Intergenic 19979 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-6 chr5 123906512 123906783 + 0.590428395010947 NA promoter-TSS (NM_026603) promoter-TSS (NM_026603) -628 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-5 chr11 121673485 121673905 + 0.590428395010947 NA promoter-TSS (NM_178664) promoter-TSS (NM_178664) -544 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947 chr1 155416835 155417350 + 0.590428395010947 NA intron (NM_011273, intron 1 of 14) CpG 352 NM_011273 19775 Mm.266215 NM_011273 ENSMUSG00000026469 Xpr1 Rmc-1|Rmc1|Sxv|Syg1|XR xenotropic and polytropic retrovirus receptor 1 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-6 chr2 60729244 60729964 + 0.590428395010947 NA Intergenic Intergenic -7001 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-9 chr6 108118484 108118872 + 0.590428395010947 NA exon (NM_145937, exon 8 of 9) exon (NM_145937, exon 8 of 9) 53633 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding common_peak1_30_35_-0.492420482316286_4.92371476028417_0.590428395010947 chr13 25070510 25070767 + 0.590428395010947 NA intron (NM_001195617, intron 2 of 7) intron (NM_001195617, intron 2 of 7) 14634 NM_177577 195208 Mm.284719 NM_177577 ENSMUSG00000035910 Dcdc2a AW492955|Dcdc2|RU2 doublecortin domain containing 2a protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-7 chr5 125165091 125165647 + 0.590428395010947 NA intron (NM_001253905, intron 1 of 42) intron (NM_001253905, intron 1 of 42) 13845 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-8 chr5 146705660 146706133 + 0.590428395010947 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 89060 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-4 chr11 100289808 100290219 + 0.590428395010947 NA Intergenic Intergenic -20142 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-10 chr8 60758782 60759199 + 0.590428395010947 NA Intergenic Intergenic 103433 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947 chr8 36704002 36704314 + 0.590428395010947 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 28896 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-10 chr8 106198133 106198770 + 0.590428395010947 NA non-coding (NR_151676, exon 9 of 9) non-coding (NR_151676, exon 9 of 9) 12482 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-2 chr13 92353861 92354516 + 0.590428395010947 NA promoter-TSS (NM_010049) promoter-TSS (NM_010049) -595 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak2_30_35_-0.492420482316286_4.92371476028417_0.590428395010947-8 chr5 143314824 143315336 + 0.590428395010947 NA exon (NM_172726, exon 1 of 6) exon (NM_172726, exon 1 of 6) 280 NM_172726 231868 Mm.440105 NM_172726 ENSMUSG00000039244 E130309D02Rik A630028N22 RIKEN cDNA E130309D02 gene protein-coding common_peak1_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-2 chr8 126497791 126498032 + 0.590428395010947 NA Intergenic Intergenic -22846 NM_001159907 212728 Mm.482479 NM_001159907 ENSMUSG00000090290 Tarbp1 Gm17296|Gm179 TAR RNA binding protein 1 protein-coding common_peak2_31_35_-0.446939936797761_4.94645503304343_0.590428395010947-3 chr16 23456755 23457310 + 0.590428395010947 NA intron (NM_008555, intron 13 of 15) intron (NM_008555, intron 13 of 15) 27899 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-6 chr2 120132378 120132832 + 0.590343908676236 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 21970 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-14 chr4 130107212 130107415 + 0.590343908676236 NA promoter-TSS (NM_026441) promoter-TSS (NM_026441) -243 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-10 chr18 75410244 75410661 + 0.590343908676236 NA Intergenic Intergenic 43087 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236 chr8 36096233 36096716 + 0.590343908676236 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 1646 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-12 chr4 149737423 149737772 + 0.590343908676236 NA 5' UTR (NM_001284273, exon 1 of 6) 5' UTR (NM_001284273, exon 1 of 6) 173 NM_001284273 230917 Mm.266704 NM_177672 ENSMUSG00000044700 Tmem201 AV028368|D4Ertd429e|Net5|Samp1 transmembrane protein 201 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-9 chr17 83312297 83312574 + 0.590343908676236 NA Intergenic Intergenic -38496 NM_001114361 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-9 chr8 83973044 83973352 + 0.590343908676236 NA exon (NM_008854, exon 1 of 10) exon (NM_008854, exon 1 of 10) 220 NM_008854 18747 Mm.19111 NM_008854 ENSMUSG00000005469 Prkaca PKCD|Pkaca protein kinase, cAMP dependent, catalytic, alpha protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-4 chr19 26747768 26748112 + 0.590343908676236 NA promoter-TSS (NM_026003) promoter-TSS (NM_026003) -225 NM_001347439 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-14 chr6 121084982 121085436 + 0.590343908676236 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -3582 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-7 chr13 98690857 98691132 + 0.590343908676236 NA intron (NM_001025606, intron 2 of 3) intron (NM_001025606, intron 2 of 3) 3837 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-3 chr13 67360205 67360554 + 0.590343908676236 NA intron (NM_001038651, intron 1 of 3) intron (NM_001038651, intron 1 of 3) 193 NM_001038651 629016 Mm.440800 NM_001038651 ENSMUSG00000098905 Zfp953 E130120F12Rik zinc finger protein 953 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-10 chrX 94797951 94798182 + 0.590343908676236 NA non-coding (NR_003292, exon 1 of 1) non-coding (NR_003292, exon 1 of 1) 223 NR_003292 668171 Mm.426134 NR_003292 Zxda 4933406P09Rik|AW413531 zinc finger, X-linked, duplicated A pseudo common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-8 chr6 91643428 91643775 + 0.590343908676236 NA Intergenic Intergenic -40466 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-13 chr3 126276844 126277179 + 0.590343908676236 NA Intergenic G-rich|Low_complexity|Low_complexity -86841 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236 chr1 52233521 52233794 + 0.590343908676236 NA promoter-TSS (NM_001113383) promoter-TSS (NM_001113383) -425 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-2 chr11 116827646 116827881 + 0.590343908676236 NA exon (NM_026280, exon 1 of 4) exon (NM_026280, exon 1 of 4) 283 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-7 chr5 137532223 137532430 + 0.590343908676236 NA intron (NM_010312, intron 1 of 9) intron (NM_010312, intron 1 of 9) 980 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-3 chr11 31565743 31566147 + 0.590343908676236 NA Intergenic Intergenic 105917 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-11 chr4 118062356 118062712 + 0.590343908676236 NA intron (NM_001285520, intron 2 of 11) intron (NM_001285520, intron 2 of 11) 72412 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-9 chr3 131110291 131110554 + 0.590343908676236 NA 5' UTR (NM_010703, exon 1 of 12) 5' UTR (NM_010703, exon 1 of 12) 125 NM_001276402 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-5 chr17 33817103 33817562 + 0.590343908676236 NA exon (NM_030697, exon 3 of 11) exon (NM_030697, exon 3 of 11) 6809 NM_030697 80880 Mm.196330 NM_030697 ENSMUSG00000042099 Kank3 0610013D04Rik|Ankrd47|D17Ertd288e|NG28 KN motif and ankyrin repeat domains 3 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-15 chr9 67229461 67229794 + 0.590343908676236 NA intron (NM_001081242, intron 53 of 57) intron (NM_001081242, intron 53 of 57) 7099 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236 chr1 40515557 40515969 + 0.590343908676236 NA 5' UTR (NM_010553, exon 2 of 13) 5' UTR (NM_010553, exon 2 of 13) 401 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-16 chr9 70283614 70283981 + 0.590343908676236 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 76447 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-5 chr13 70646269 70646653 + 0.590343908676236 NA Intergenic Intergenic -8827 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-6 chr18 9213185 9213524 + 0.590343908676236 NA exon (NM_008058, exon 1 of 1) exon (NM_008058, exon 1 of 1) 498 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236-4 chr16 17809260 17809550 + 0.590343908676236 NA Intergenic Intergenic 12123 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-7 chr2 158217800 158218090 + 0.590343908676236 NA intron (NM_001131021, intron 2 of 15) intron (NM_001131021, intron 2 of 15) 11279 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-11 chr19 41979695 41980167 + 0.590343908676236 NA intron (NM_028152, intron 1 of 30) intron (NM_028152, intron 1 of 30) 1205 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-4 chr11 117994200 117994510 + 0.590343908676236 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 7498 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-16 chr7 45061615 45061918 + 0.590343908676236 NA promoter-TSS (NM_022999) promoter-TSS (NM_022999) -114 NM_022999 65116 Mm.379098 NM_022999 ENSMUSG00000007837 Prrg2 1600014G02Rik|2510041M06Rik|N4WBP1 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-3 chr11 97812379 97812728 + 0.590343908676236 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 12988 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-12 chr2 33359641 33360180 + 0.590343908676236 NA intron (NM_001290570, intron 1 of 16) intron (NM_001290570, intron 1 of 16) 11584 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-8 chr15 75911017 75911366 + 0.590343908676236 NA exon (NM_178646, exon 1 of 1) exon (NM_178646, exon 1 of 1) 1456 NM_178646 105734 Mm.275583 NM_178646 ENSMUSG00000103906 Tigd5 AA409802|AA409995|AI666797 tigger transposable element derived 5 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-13 chr6 24663265 24663747 + 0.590343908676236 NA intron (NM_028459, intron 1 of 10) intron (NM_028459, intron 1 of 10) 1489 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-15 chr5 92931259 92931625 + 0.590343908676236 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 33449 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-2 chr1 88543646 88543991 + 0.590343908676236 NA Intergenic Intergenic -7699 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-10 chr4 54772031 54772379 + 0.590343908676236 NA Intergenic Intergenic -175740 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-5 chr2 103670610 103670911 + 0.590343908676236 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 90510 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-6 chr13 80884623 80885077 + 0.590343908676236 NA intron (NM_001042591, intron 1 of 7) intron (NM_001042591, intron 1 of 7) -1245 NR_153411 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak2_26_15_0.479601830473403_4.2398009152367_0.590343908676236 chr10 84438204 84438576 + 0.590343908676236 NA intron (NM_001004363, intron 1 of 6) intron (NM_001004363, intron 1 of 6) 2081 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-8 chr3 60503265 60503594 + 0.590343908676236 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 2250 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_26_15_0.479601830473403_4.2398009152367_0.590343908676236-2 chr1 152018552 152019133 + 0.590343908676236 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 71478 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik RIKEN cDNA 1700025G04 gene protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-4 chr5 137108990 137109390 + 0.590343908676233 NA Intergenic PB1D10|SINE|Alu 7017 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding unique_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233 chr6 146933507 146933944 + 0.590343908676233 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 20696 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-6 chr17 35263070 35263412 + 0.590343908676233 NA intron (NM_001267808, intron 4 of 11) CpG 118 NM_001267808 14980 Mm.439675 NM_001267808 H2-L H-2L histocompatibility 2, D region locus L protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-4 chr14 29082566 29082853 + 0.590343908676233 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 64501 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-3 chr11 106193135 106193459 + 0.590343908676233 NA intron (NM_001252449, intron 1 of 10) intron (NM_001252449, intron 1 of 10) 306 NM_001252448 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-12 chr7 65369535 65370178 + 0.590343908676233 NA intron (NM_009386, intron 1 of 27) intron (NM_009386, intron 1 of 27) 1388 NM_001163574 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-5 chr15 77857608 77857852 + 0.590343908676233 NA Intergenic CpG -15555 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233 chr11 35947647 35948258 + 0.590343908676233 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 32137 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-9 chr3 85973049 85973381 + 0.590343908676233 NA Intergenic Intergenic 29276 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-13 chr7 133120457 133120970 + 0.590343908676233 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 2770 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-8 chr2 168077641 168078208 + 0.590343908676233 NA Intergenic Intergenic -3080 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-3 chr3 121663142 121663435 + 0.590343908676233 NA Intergenic Intergenic -7475 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-10 chr4 150709954 150710275 + 0.590343908676233 NA Intergenic Intergenic -57940 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-8 chr8 124721456 124721718 + 0.590343908676233 NA promoter-TSS (NM_026855) promoter-TSS (NM_026855) 407 NM_001357357 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-2 chr1 92911178 92911413 + 0.590343908676233 NA promoter-TSS (NR_138577) promoter-TSS (NR_138577) 470 NM_181405 108657 Mm.200971 NM_181405 ENSMUSG00000026269 Rnpepl1 1110014H17Rik|AI894167 arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-2 chr17 80799225 80799475 + 0.590343908676233 NA Intergenic Intergenic -71325 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-11 chr5 149584638 149585040 + 0.590343908676233 NA intron (NM_029440, intron 14 of 22) intron (NM_029440, intron 14 of 22) -46809 NR_045423 100415916 Mm.145528 NR_045423 ENSMUSG00000107132 Gm15997 - predicted gene 15997 ncRNA unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-12 chr8 27048987 27049297 + 0.590343908676233 NA intron (NM_001039077, intron 4 of 4) intron (NM_001039077, intron 4 of 4) 6587 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233 chr1 75401151 75401611 + 0.590343908676233 NA intron (NM_001085370, intron 5 of 38) intron (NM_001085370, intron 5 of 38) 1296 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-7 chr8 70594542 70594796 + 0.590343908676233 NA exon (NM_023627, exon 2 of 11) exon (NM_023627, exon 2 of 11) 188 NM_023627 71780 Mm.29357 NM_023627 ENSMUSG00000019139 Isyna1 1300017C10Rik|AU018670 myo-inositol 1-phosphate synthase A1 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-5 chr15 38384225 38384551 + 0.590343908676233 NA Intergenic Intergenic -83677 NM_001289471 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-9 chr4 132768370 132768731 + 0.590343908676233 NA intron (NM_011284, intron 1 of 8) CpG 190 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-6 chr8 12672439 12672834 + 0.590343908676233 NA promoter-TSS (NM_198031) promoter-TSS (NM_198031) -536 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-2 chr11 86566859 86567179 + 0.590343908676233 NA intron (NM_001199046, intron 9 of 9) intron (NM_001199046, intron 9 of 9) 17139 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-9 chr8 128683160 128683553 + 0.590343908676233 NA Intergenic Intergenic -2298 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-4 chr14 103070233 103070631 + 0.590343908676233 NA exon (NM_001033242, exon 1 of 4) exon (NM_001033242, exon 1 of 4) 216 NM_001033242 211286 Mm.295289 NM_001033242 ENSMUSG00000022125 Cln5 A730075N08Rik ceroid-lipofuscinosis, neuronal 5 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-8 chr2 157204391 157204696 + 0.590343908676233 NA promoter-TSS (NM_001139516) promoter-TSS (NM_001139516) -9 NM_001139516 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 RB transcriptional corepressor like 1 protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-5 chr7 34806700 34807046 + 0.590343908676233 NA intron (NM_175140, intron 1 of 3) intron (NM_175140, intron 1 of 3) 5838 NM_175140 68947 Mm.29380 NM_175140 ENSMUSG00000060402 Chst8 1500011J21Rik|AI426009 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-7 chr2 69380611 69381124 + 0.590343908676233 NA intron (NM_175512, intron 1 of 4) intron (NM_175512, intron 1 of 4) 405 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-14 chr8 77490700 77490991 + 0.590343908676233 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -26211 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-6 chr17 14961787 14962171 + 0.590343908676233 NA promoter-TSS (NM_001360983) promoter-TSS (NM_001360983) -719 NM_024250 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-10 chr3 96486744 96486974 + 0.590343908676233 NA Intergenic CpG -34553 NM_001256181 329716 Mm.275223 NM_183223 ENSMUSG00000046317 BC107364 D730018G16 cDNA sequence BC107364 protein-coding common_peak1_17_22_-0.624795727811064_4.21116409215148_0.590343908676233 chr12 91848801 91849019 + 0.590343908676233 NA intron (NM_001039089, intron 1 of 20) CpG 247 NM_001039089 20338 Mm.250605 NM_011344 ENSMUSG00000020964 Sel1l AW493766|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-7 chr17 27140477 27140818 + 0.590343908676233 NA Intergenic Intergenic -6756 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-3 chr1 134076929 134077163 + 0.590343908676233 NA 3' UTR (NM_007570, exon 2 of 2) 3' UTR (NM_007570, exon 2 of 2) 2109 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak2_17_22_-0.624795727811064_4.21116409215148_0.590343908676233-11 chr8 22544226 22544617 + 0.590343908676233 NA intron (NM_011394, intron 4 of 10) intron (NM_011394, intron 4 of 10) 49392 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak2_209_193_-0.181831206560358_7.50899723890695_0.589940284655538 chr8 44934581 44936451 + 0.589940284655538 NA Intergenic Intergenic -14692 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_159_113_0.195641990087201_6.93071100920834_0.589635155556856 chr15 80133184 80134228 + 0.589635155556856 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 552 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak1_160_113_0.204567357632398_6.93517369298094_0.589635155556856 chr9 56995035 56996232 + 0.589635155556856 NA exon (NM_019651, exon 1 of 13) exon (NM_019651, exon 1 of 13) 665 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding common_peak2_251_229_-0.166229711844029_7.76237519502236_0.589372477666204 chr2 118109518 118111725 + 0.589372477666204 NA intron (NR_126479, intron 1 of 9) intron (NR_126479, intron 1 of 9) 581 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak2_81_81_-0.286592437017646_6.21425578610926_0.589033785605532 chr12 33182355 33183501 + 0.589033785605532 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 35242 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_172_161_-0.199412963017769_7.24014352137574_0.588852838663165 chr8 111536162 111537692 + 0.588852838663165 NA 5' UTR (NM_001168621, exon 1 of 5) 5' UTR (NM_001168621, exon 1 of 5) 287 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak1_190_177_-0.193503246019381_7.37898180795671_0.588794283501 chr10 93309499 93310851 + 0.588794283501 NA intron (NM_001322265, intron 1 of 4) CpG 984 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak2_154_146_-0.216620886102948_7.09136190178489_0.588405675738705 chr7 112679579 112681899 + 0.588405675738705 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 1419 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak1_178_127_0.189277572336508_7.09463878616825_0.588405675738705-2 chr8 83608248 83609320 + 0.588405675738705 NA intron (NM_001308227, intron 1 of 2) CpG 236 NM_001308227 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_154_146_-0.216620886102948_7.09136190178489_0.588405675738705 chr17 27203316 27204408 + 0.588405675738705 NA exon (NM_146075, exon 1 of 9) exon (NM_146075, exon 1 of 9) 576 NM_146075 224640 Mm.29689 NM_146075 ENSMUSG00000044857 Lemd2 BC026588|Lem2|NET25 LEM domain containing 2 protein-coding common_peak1_178_127_0.189277572336508_7.09463878616825_0.588405675738705 chr8 70539668 70540504 + 0.588405675738705 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 411 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak2_155_146_-0.207408527300284_7.09596808118622_0.588405675738705 chr3 41184787 41186393 + 0.588405675738705 NA Intergenic Intergenic -102544 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_154_146_-0.216620886102948_7.09136190178489_0.588405675738705-2 chr2 168229925 168230906 + 0.588405675738705 NA promoter-TSS (NM_001310084) promoter-TSS (NM_001310084) -36 NM_001310084 13480 Mm.422657 NM_010072 ENSMUSG00000078919 Dpm1 AI118379|AI194292 dolichol-phosphate (beta-D) mannosyltransferase 1 protein-coding common_peak2_128_89_0.228170056533968_6.60593812459666_0.587900541753207 chr7 16046275 16047860 + 0.587900541753207 NA Intergenic Intergenic -24778 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_127_89_0.217022009168389_6.60036410091387_0.587900541753207 chr19 18759366 18760803 + 0.587900541753207 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 10101 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_108_105_-0.249225569434753_6.60330766984582_0.587900541753182 chr8 104340270 104341359 + 0.587900541753182 NA exon (NM_024217, exon 1 of 5) exon (NM_024217, exon 1 of 5) 220 NM_024217 68119 Mm.390108 NM_024217 ENSMUSG00000031875 Cmtm3 9430096L06Rik|AI413895|BNAS2|Cklfsf3 CKLF-like MARVEL transmembrane domain containing 3 protein-coding common_peak1_143_101_0.205175947554721_6.77501331574886_0.587873510259615 chr19 41933564 41934758 + 0.587873510259615 NA promoter-TSS (NM_001164561) promoter-TSS (NM_001164561) 716 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding common_peak2_143_101_0.205175947554721_6.77501331574886_0.587873510259615 chr2 18997316 18998828 + 0.587873510259615 NA promoter-TSS (NM_001355149) promoter-TSS (NM_001355149) 49 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak2_123_118_-0.231423203328406_6.77910616164374_0.58787351025959 chr8 22192755 22193777 + 0.58787351025959 NA intron (NM_027338, intron 1 of 13) intron (NM_027338, intron 1 of 13) 406 NM_027338 70160 Mm.41453 NM_027338 ENSMUSG00000031479 Vps36 1700010A24Rik|2210415M20Rik|2810408E15Rik|Eap45 vacuolar protein sorting 36 protein-coding common_peak2_123_118_-0.231423203328406_6.77910616164374_0.58787351025959-2 chr8 84236305 84237027 + 0.58787351025959 NA intron (NM_172503, intron 1 of 13) intron (NM_172503, intron 1 of 13) 376 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak1_123_118_-0.231423203328406_6.77910616164374_0.58787351025959 chr5 74093070 74094166 + 0.58787351025959 NA promoter-TSS (NR_031758) promoter-TSS (NR_031758) 88 NR_031758 100313943 Mm.46547 NR_031758 ENSMUSG00000093355 Snora26 MBI-6 small nucleolar RNA, H/ACA box 26 snoRNA common_peak2_330_243_0.139155003086067_8.00031483910592_0.587855561034615 chr3 81035847 81038276 + 0.587855561034615 NA 5' UTR (NM_019971, exon 1 of 6) 5' UTR (NM_019971, exon 1 of 6) 645 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_51_33_0.33102035363153_5.2529730180661_0.587580258678924-2 chr18 57877952 57878434 + 0.587580258678924 NA promoter-TSS (NM_009194) promoter-TSS (NM_009194) -485 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak2_51_33_0.33102035363153_5.2529730180661_0.587580258678924 chr18 36491772 36492433 + 0.587580258678924 NA Intergenic B1_Mur1|SINE|Alu 23703 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_39_43_-0.416789655238867_5.25103679101786_0.587580258678924 chr10 40152043 40152587 + 0.587580258678924 NA Intergenic Intergenic -10061 NM_001114332 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-5 chr16 23318907 23319270 + 0.587580258678924 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 28618 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-3 chr13 45882811 45883604 + 0.587580258678924 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 81784 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_39_43_-0.416789655238867_5.25103679101786_0.587580258678924-2 chr2 135861213 135862055 + 0.587580258678924 NA intron (NM_001355156, intron 3 of 37) intron (NM_001355156, intron 3 of 37) 96796 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-9 chr9 114978200 114979208 + 0.587580258678924 NA Intergenic CpG -44717 NM_175380 333433 Mm.38198 NM_175380 ENSMUSG00000050627 Gpd1l 2210409H23Rik|D9Ertd660e glycerol-3-phosphate dehydrogenase 1-like protein-coding common_peak1_39_43_-0.416789655238867_5.25103679101786_0.587580258678924-2 chr14 33338724 33339303 + 0.587580258678924 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 72011 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_51_33_0.33102035363153_5.2529730180661_0.587580258678924-3 chr4 89351020 89351567 + 0.587580258678924 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -40261 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-7 chr5 92137961 92138390 + 0.587580258678924 NA promoter-TSS (NM_001359195) promoter-TSS (NM_001359195) 237 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924 chr10 120721997 120722631 + 0.587580258678924 NA Intergenic Intergenic -43418 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-6 chr17 83350987 83351600 + 0.587580258678924 NA intron (NM_001357886, intron 1 of 21) CpG 362 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-4 chr14 43529454 43529941 + 0.587580258678924 NA Intergenic Intergenic 78316 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding common_peak2_39_43_-0.416789655238867_5.25103679101786_0.587580258678924 chr10 96628723 96629253 + 0.587580258678924 NA Intergenic Intergenic 11987 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_39_43_-0.416789655238867_5.25103679101786_0.587580258678924-3 chr6 87851234 87851553 + 0.587580258678924 NA promoter-TSS (NM_013493) promoter-TSS (NM_013493) -287 NM_001355195 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-8 chr7 132859271 132859690 + 0.587580258678924 NA intron (NM_198017, intron 1 of 8) CpG 255 NM_198017 109359 Mm.274824 NM_198017 ENSMUSG00000030965 Abraxas2 AA589499|AI853413|Abro1|C430003P19Rik|Fam175b BRISC complex subunit protein-coding common_peak1_51_33_0.33102035363153_5.2529730180661_0.587580258678924-2 chr12 83987796 83988387 + 0.587580258678924 NA exon (NM_134188, exon 1 of 3) exon (NM_134188, exon 1 of 3) 230 NM_134188 171210 Mm.371675 NM_134188 ENSMUSG00000021226 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 protein-coding common_peak2_161_114_0.200837422609995_6.94590876224937_0.587284553102199 chr11 115830734 115832638 + 0.587284553102199 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 7628 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_161_114_0.200837422609995_6.94590876224937_0.587284553102199 chr10 17723302 17724686 + 0.587284553102199 NA exon (NM_010828, exon 2 of 2) exon (NM_010828, exon 2 of 2) 766 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_139_132_-0.218036402101874_6.94626423445025_0.587284553102199 chr8 123065269 123066124 + 0.587284553102199 NA exon (NM_153176, exon 1 of 17) exon (NM_153176, exon 1 of 17) 188 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN SPG7, paraplegin matrix AAA peptidase subunit protein-coding common_peak2_138_132_-0.228305384118103_6.94112974344214_0.587284553102199 chr1 55026668 55027755 + 0.587284553102199 NA intron (NM_031179, intron 1 of 24) CpG 267 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding common_peak2_94_93_-0.272823477951857_6.41817711270171_0.587117602519902-3 chr8 119558011 119559095 + 0.587117602519902 NA intron (NM_019709, intron 1 of 23) CpG 208 NM_001167910 56453 Mm.206934 NM_019709 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 protein-coding common_peak2_94_93_-0.272823477951857_6.41817711270171_0.587117602519902 chr18 35771485 35772459 + 0.587117602519902 NA 5' UTR (NM_019912, exon 1 of 7) 5' UTR (NM_019912, exon 1 of 7) 413 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding common_peak2_94_93_-0.272823477951857_6.41817711270171_0.587117602519902-2 chr8 111145020 111146009 + 0.587117602519902 NA promoter-TSS (NR_040363) promoter-TSS (NR_040363) -16 NR_040364 434350 Mm.442061 NR_040363 9430091E24Rik - RIKEN cDNA 9430091E24 gene ncRNA common_peak2_70_71_-0.305304259735581_6.01727287157452_0.585993193419137 chr2 53190442 53191160 + 0.585993193419137 NA intron (NM_018785, intron 1 of 25) intron (NM_018785, intron 1 of 25) 386 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding common_peak2_70_71_-0.305304259735581_6.01727287157452_0.585993193419137-3 chr8 124291146 124291908 + 0.585993193419137 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 60133 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_86_58_0.273105574242879_6.01919583648328_0.585993193419137 chr4 156191410 156192496 + 0.585993193419137 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 5535 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_86_58_0.273105574242879_6.01919583648328_0.585993193419137-2 chr7 99306648 99308063 + 0.585993193419137 NA intron (NM_001048167, intron 1 of 2) intron (NM_001048167, intron 1 of 2) 39009 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding common_peak2_70_71_-0.305304259735581_6.01727287157452_0.585993193419137-2 chr6 125313220 125313927 + 0.585993193419137 NA intron (NM_010736, intron 1 of 9) intron (NM_010736, intron 1 of 9) 312 NM_010736 17000 Mm.3122 NM_010736 ENSMUSG00000030339 Ltbr AI256028|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3 lymphotoxin B receptor protein-coding unique_peak1_86_58_0.273105574242879_6.01919583648328_0.585993193419137 chr15 59822189 59823281 + 0.585993193419137 NA Intergenic MIRb|SINE|MIR -27776 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_70_71_-0.305304259735581_6.01727287157452_0.585993193419137 chr10 117718027 117718757 + 0.585993193419137 NA Intergenic Intergenic -7634 NM_001288586 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding common_peak1_59_61_-0.33071874476099_5.78883693800638_0.585862008351123-2 chr16 96082776 96083436 + 0.585862008351123 NA promoter-TSS (NM_176928) promoter-TSS (NM_176928) -678 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak1_59_61_-0.33071874476099_5.78883693800638_0.585862008351123 chr12 33429602 33430175 + 0.585862008351123 NA exon (NM_172253, exon 1 of 4) exon (NM_172253, exon 1 of 4) 264 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding common_peak2_59_61_-0.33071874476099_5.78883693800638_0.585862008351123 chr2 127336118 127337170 + 0.585862008351123 NA intron (NM_010090, intron 1 of 3) CpG 485 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_73_49_0.280049571709474_5.78388097562946_0.585862008351098-3 chr5 105789560 105790973 + 0.585862008351098 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -86302 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_73_49_0.280049571709474_5.78388097562946_0.585862008351098 chr1 91086156 91087579 + 0.585862008351098 NA intron (NM_008515, intron 7 of 22) intron (NM_008515, intron 7 of 22) 33423 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_73_49_0.280049571709474_5.78388097562946_0.585862008351098 chr10 40301097 40301795 + 0.585862008351098 NA intron (NM_009665, intron 1 of 7) CpG 740 NM_007444 100041585 Mm.476925 NM_007444 ENSMUSG00000063953 Amd2 AdoMetDC|Amd1|Amd3 S-adenosylmethionine decarboxylase 2 protein-coding common_peak2_73_49_0.280049571709474_5.78388097562946_0.585862008351098-2 chr6 34863234 34864148 + 0.585862008351098 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 545 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_73_49_0.280049571709474_5.78388097562946_0.585862008351098-2 chr15 53221443 53222430 + 0.585862008351098 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 124247 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_124_119_-0.231989814275575_6.79089568847073_0.585272478421067 chr2 30236757 30238259 + 0.585272478421067 NA promoter-TSS (NM_177725) promoter-TSS (NM_177725) 123 NR_028299 67350 Mm.402683 NR_028299 1700084E18Rik - RIKEN cDNA 1700084E18 gene ncRNA common_peak1_99_68_0.246719425800895_6.23188416967862_0.585182446397866 chr15 80437329 80438618 + 0.585182446397866 NA intron (NR_155274, intron 1 of 2) intron (NR_155274, intron 1 of 2) 630 NR_155275 102633578 Mm.397484 NR_155274 ENSMUSG00000115888 Gm31369 - predicted gene, 31369 ncRNA common_peak2_82_82_-0.286715810456006_6.23168152611892_0.585182446397866 chr11 50430451 50431315 + 0.585182446397866 NA exon (NM_172557, exon 1 of 18) exon (NM_172557, exon 1 of 18) 228 NM_172557 216724 Mm.390400 NM_172557 ENSMUSG00000020375 Rufy1 3000002E04Rik|Rabip4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding common_peak2_99_68_0.246719425800895_6.23188416967862_0.585182446397866-2 chr8 126613405 126614031 + 0.585182446397866 NA Intergenic Intergenic -20282 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_99_68_0.246719425800895_6.23188416967862_0.585182446397866 chr18 80149822 80150869 + 0.585182446397866 NA intron (NM_175028, intron 1 of 3) intron (NM_175028, intron 1 of 3) 1137 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding common_peak1_199_143_0.178263901563508_7.25905695222407_0.585085040827714 chr11 49087788 49089489 + 0.585085040827714 NA intron (NM_008330, intron 1 of 1) intron (NM_008330, intron 1 of 1) 1621 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_174_163_-0.200649072464889_7.25722746838564_0.585085040827714 chr8 85026901 85027652 + 0.585085040827714 NA intron (NM_026760, intron 1 of 2) CpG 443 NM_026760 68544 Mm.196005 NM_026760 ENSMUSG00000041203 Trir 1110002H14Rik|2310036O22Rik|AI854688 telomerase RNA component interacting RNase protein-coding common_peak2_174_163_-0.200649072464889_7.25722746838564_0.585085040827714 chr11 3538598 3539817 + 0.585085040827714 NA promoter-TSS (NM_001284429) promoter-TSS (NM_001284429) 85 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak2_140_133_-0.218647264501507_6.95676555820702_0.584971964717394 chr11 60877717 60879390 + 0.584971964717394 NA intron (NM_001168507, intron 1 of 2) CpG 485 NM_173453 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak1_129_90_0.223290473863807_6.6194398771306_0.584966727539883 chr15 79327118 79328135 + 0.584966727539883 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 745 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_62_41_0.301052875468073_5.5428438605128_0.584217371416963-4 chr4 43727682 43728451 + 0.584217371416963 NA TTS (NM_027511) TTS (NM_027511) 868 NM_027511 100039781 Mm.18796 NM_027511 ENSMUSG00000071001 Hrct1 3830408D24Rik histidine rich carboxyl terminus 1 protein-coding common_peak2_62_41_0.301052875468073_5.5428438605128_0.584217371416963-2 chr15 36496403 36496868 + 0.584217371416963 NA promoter-TSS (NM_001358006) promoter-TSS (NM_001358006) 99 NM_001358007 68839 Mm.396537 NM_175134 ENSMUSG00000048307 Ankrd46 1110054N06Rik|AI314978|AI987733 ankyrin repeat domain 46 protein-coding common_peak2_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-2 chr13 64161927 64162658 + 0.584217371416963 NA exon (NM_019986, exon 1 of 8) exon (NM_019986, exon 1 of 8) 426 NM_019986 56541 Mm.40989 NM_019986 ENSMUSG00000021476 Habp4 4933413D03Rik|4933428J01Rik hyaluronic acid binding protein 4 protein-coding common_peak1_49_52_-0.36562159241089_5.54510965835775_0.584217371416963 chr12 99356073 99356684 + 0.584217371416963 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 93696 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_62_41_0.301052875468073_5.5428438605128_0.584217371416963-5 chr5 34573827 34574398 + 0.584217371416963 NA promoter-TSS (NR_106111) promoter-TSS (NR_106111) -39 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA common_peak2_62_41_0.301052875468073_5.5428438605128_0.584217371416963 chr11 69991586 69992256 + 0.584217371416963 NA intron (NM_019749, intron 1 of 3) intron (NM_019749, intron 1 of 3) 551 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding common_peak1_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-4 chr19 60581353 60581681 + 0.584217371416963 NA promoter-TSS (NM_001172096) promoter-TSS (NM_001172096) -494 NM_001172096 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding common_peak1_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-5 chr7 82070360 82071037 + 0.584217371416963 NA intron (NR_045744, intron 1 of 3) intron (NR_045744, intron 1 of 3) 311 NR_045744 434205 Mm.333986 NR_045744 ENSMUSG00000109145 Gm20744 - predicted gene, 20744 ncRNA common_peak2_62_41_0.301052875468073_5.5428438605128_0.584217371416963-4 chr4 119124468 119125238 + 0.584217371416963 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 16108 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_62_41_0.301052875468073_5.5428438605128_0.584217371416963 chr11 74837572 74838350 + 0.584217371416963 NA intron (NM_010813, intron 4 of 5) CpG 7037 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_62_41_0.301052875468073_5.5428438605128_0.584217371416963-3 chr3 89393985 89394712 + 0.584217371416963 NA promoter-TSS (NR_040404) promoter-TSS (NR_040404) 58 NR_040404 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 - predicted gene 15417 ncRNA common_peak2_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-5 chr9 63895353 63895852 + 0.584217371416963 NA Intergenic Intergenic 126457 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-3 chr16 45872865 45873445 + 0.584217371416963 NA Intergenic Intergenic -28404 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_62_41_0.301052875468073_5.5428438605128_0.584217371416963-5 chr8 4258554 4259172 + 0.584217371416963 NA TTS (NM_011592) TTS (NM_011592) 411 NM_183315 330695 Mm.34210 NM_183315 ENSMUSG00000048644 Ctxn1 BC028881|Ctxn cortexin 1 protein-coding common_peak1_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-2 chr16 23519359 23519891 + 0.584217371416963 NA intron (NM_001359083, intron 1 of 10) intron (NM_001359083, intron 1 of 10) 1190 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding common_peak2_62_41_0.301052875468073_5.5428438605128_0.584217371416963-6 chr6 125166154 125166931 + 0.584217371416963 NA promoter-TSS (NM_008084) promoter-TSS (NM_008084) -75 NM_001289726 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak2_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-6 chr9 69886803 69887395 + 0.584217371416963 NA Intergenic Intergenic -102367 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak1_62_41_0.301052875468073_5.5428438605128_0.584217371416963-2 chr12 98746955 98747782 + 0.584217371416963 NA intron (NM_001008506, intron 1 of 14) CpG 400 NM_029334 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding common_peak2_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-3 chr16 13109933 13110532 + 0.584217371416963 NA intron (NM_015769, intron 1 of 10) CpG 496 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding common_peak2_62_41_0.301052875468073_5.5428438605128_0.584217371416963-3 chr2 21237274 21237931 + 0.584217371416963 NA Intergenic Intergenic 31878 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak2_49_52_-0.36562159241089_5.54510965835775_0.584217371416963-4 chr16 45872633 45873481 + 0.584217371416963 NA Intergenic Intergenic -28306 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_49_52_-0.36562159241089_5.54510965835775_0.584217371416963 chr10 19014769 19015400 + 0.584217371416963 NA intron (NM_009397, intron 1 of 8) intron (NM_009397, intron 1 of 8) 326 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_114_79_0.233527126089526_6.43869165793213_0.583801854567669-2 chr5 134437797 134438779 + 0.583801854567669 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 17974 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak2_114_79_0.233527126089526_6.43869165793213_0.583801854567669 chr17 73709006 73710535 + 0.583801854567669 NA intron (NM_027864, intron 1 of 14) CpG 681 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_114_79_0.233527126089526_6.43869165793213_0.583801854567669 chr17 3597458 3598894 + 0.583801854567669 NA Intergenic Intergenic 40352 NR_045302 68230 Mm.431352 NR_045302 1700102H20Rik - RIKEN cDNA 1700102H20 gene ncRNA common_peak2_96_94_-0.25824505391987_6.44073308137101_0.583801854567669 chr5 77386283 77387084 + 0.583801854567669 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 21362 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_194_180_-0.187925170793247_7.40588330168658_0.583694520455673 chr8 35590441 35592422 + 0.583694520455673 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -2411 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_220_159_0.169290933539919_7.40657356165732_0.583694520455673 chr11 96285579 96287835 + 0.583694520455673 NA promoter-TSS (NM_010460) promoter-TSS (NM_010460) 61 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding common_peak1_303_273_-0.150033567135113_8.02301529939297_0.583439148102478 chr2 38822422 38825699 + 0.583439148102478 NA intron (NM_010264, intron 3 of 10) intron (NM_010264, intron 3 of 10) -28675 NR_029568 387176 NR_029568 ENSMUSG00000065423 Mir181a-2 Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a|mir-181a-2 microRNA 181a-2 ncRNA common_peak2_235_215_-0.169596375987277_7.67008931416983_0.583418469176462 chr10 20311384 20313356 + 0.583418469176462 NA promoter-TSS (NM_153787) promoter-TSS (NM_153787) -99 NM_001025392 72567 Mm.294783 NM_153787 ENSMUSG00000037608 Bclaf1 2610102K23Rik|2700025J07Rik|2810454G14Rik|5730534O06Rik|AI450190|AW556225|Btf|mKIAA0164 BCL2-associated transcription factor 1 protein-coding common_peak2_176_164_-0.193140506268927_7.26975196111135_0.583237919571832 chr6 55037586 55039244 + 0.583237919571832 NA intron (NM_180678, intron 1 of 16) CpG 414 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding common_peak1_125_120_-0.232547918601004_6.80258927797409_0.582718239339643 chr8 84236311 84237065 + 0.582718239339643 NA intron (NM_172503, intron 1 of 13) intron (NM_172503, intron 1 of 13) 354 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak1_146_103_0.206699047879173_6.80378924208068_0.582718239339643 chr12 69891802 69893508 + 0.582718239339643 NA promoter-TSS (NM_178628) promoter-TSS (NM_178628) -450 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding common_peak2_141_134_-0.219249834917343_6.96719067959216_0.582696474856676-2 chr8 111033628 111034789 + 0.582696474856676 NA 5' UTR (NM_146217, exon 1 of 21) 5' UTR (NM_146217, exon 1 of 21) 366 NM_146217 234734 Mm.24174 NM_146217 ENSMUSG00000031960 Aars AI316495|C76919|sti alanyl-tRNA synthetase protein-coding common_peak2_141_134_-0.219249834917343_6.96719067959216_0.582696474856676 chr11 88523946 88525420 + 0.582696474856676 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -94568 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-7 chr14 122913011 122913315 + 0.58239619684445 NA promoter-TSS (NM_145466) promoter-TSS (NM_145466) 2 NM_145466 223267 Mm.379358 NM_145466 ENSMUSG00000041625 Ggact A2ld1 gamma-glutamylamine cyclotransferase protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-12 chr2 131210803 131211181 + 0.58239619684445 NA intron (NR_110992, intron 1 of 1) intron (NR_110992, intron 1 of 1) 632 NR_110992 69596 Mm.2937 NM_027129 ENSMUSG00000068264 Ap5s1 0610038L13Rik|2310035K24Rik|AW060727|sigma5 adaptor-related protein 5 complex, sigma 1 subunit protein-coding common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445-3 chr13 41457738 41457970 + 0.58239619684445 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 29506 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-18 chr16 30519967 30520260 + 0.58239619684445 NA intron (NM_001357415, intron 10 of 11) intron (NM_001357415, intron 10 of 11) 30465 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-33 chr8 107197347 107197856 + 0.58239619684445 NA Intergenic Intergenic 46940 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-24 chr7 49213388 49213717 + 0.58239619684445 NA intron (NM_001111016, intron 2 of 38) MIRb|SINE|MIR -32637 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445-4 chr9 109054453 109054726 + 0.58239619684445 NA promoter-TSS (NM_026381) promoter-TSS (NM_026381) -277 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-8 chr2 131722279 131722580 + 0.58239619684445 NA Intergenic Intergenic 125227 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-4 chr11 87127393 87127663 + 0.58239619684445 NA intron (NM_197987, intron 1 of 23) CpG 453 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445 chr1 59237440 59237773 + 0.58239619684445 NA promoter-TSS (NM_028717) promoter-TSS (NM_028717) -375 NM_028717 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 alsin Rho guanine nucleotide exchange factor protein-coding common_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445 chr1 66862771 66862972 + 0.58239619684445 NA intron (NM_007381, intron 1 of 10) CpG 438 NM_007381 11363 Mm.2445 NM_007381 ENSMUSG00000026003 Acadl AA960361|AU018452|C79855|LCAD acyl-Coenzyme A dehydrogenase, long-chain protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-5 chr17 13761659 13761988 + 0.58239619684445 NA promoter-TSS (NM_022311) promoter-TSS (NM_022311) -429 NM_022311 21646 Mm.486358 NM_022311 ENSMUSG00000038347 Tcte2 AI429268|Tcte-2 t-complex-associated testis expressed 2 protein-coding common_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445-2 chr12 108453738 108453958 + 0.58239619684445 NA intron (NM_001043335, intron 1 of 21) intron (NM_001043335, intron 1 of 21) 31032 NM_001043335 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-3 chr10 78244762 78245052 + 0.58239619684445 NA promoter-TSS (NM_001081055) promoter-TSS (NM_001081055) -265 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1|b2b2416Clo|b2b2613Clo trafficking protein particle complex 10 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-8 chr13 63155269 63155584 + 0.58239619684445 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) -84603 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445 chr1 189777961 189778248 + 0.58239619684445 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 49836 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-8 chr15 41614052 41614427 + 0.58239619684445 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 165136 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-3 chrX 19162687 19162896 + 0.58239619684445 NA Intergenic Intergenic -15820 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-4 chr10 111620247 111620463 + 0.58239619684445 NA Intergenic Intergenic -26082 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-12 chr5 91114164 91114469 + 0.58239619684445 NA Intergenic Intergenic -25283 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-19 chr3 37958463 37958673 + 0.58239619684445 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 59755 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-15 chr7 49328760 49329030 + 0.58239619684445 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 82706 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-19 chr16 30972355 30972664 + 0.58239619684445 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 108923 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-13 chr17 87572089 87572398 + 0.58239619684445 NA Intergenic Intergenic -63736 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-2 chr11 4271083 4271276 + 0.58239619684445 NA 3' UTR (NM_008501, exon 4 of 4) 3' UTR (NM_008501, exon 4 of 4) 4383 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-13 chr5 142901287 142901717 + 0.58239619684445 NA Intergenic Intergenic 5252 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-15 chr4 126133502 126133694 + 0.58239619684445 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -14405 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-4 chr12 55464337 55464708 + 0.58239619684445 NA Intergenic Intergenic 28125 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-25 chr8 11394910 11395199 + 0.58239619684445 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -82228 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-4 chr11 16867776 16868156 + 0.58239619684445 NA intron (NM_207655, intron 5 of 27) intron (NM_207655, intron 5 of 27) 83316 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-9 chr15 97828422 97828706 + 0.58239619684445 NA intron (NM_001204276, intron 1 of 25) intron (NM_001204276, intron 1 of 25) 3203 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-5 chr12 110533070 110533318 + 0.58239619684445 NA intron (NM_001081457, intron 2 of 12) intron (NM_001081457, intron 2 of 12) 47455 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-7 chr13 47273316 47273695 + 0.58239619684445 NA Intergenic Intergenic 79502 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-9 chr11 110942501 110942891 + 0.58239619684445 NA Intergenic Intergenic -25337 NM_010604 16517 Mm.30176 NM_010604 ENSMUSG00000051497 Kcnj16 6430410F18Rik|AI132396|Kir5.1 potassium inwardly-rectifying channel, subfamily J, member 16 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-9 chr13 113612825 113613107 + 0.58239619684445 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 5598 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-10 chr15 83156052 83156394 + 0.58239619684445 NA intron (NM_029787, intron 8 of 8) intron (NM_029787, intron 8 of 8) 6578 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA common_peak1_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-2 chr5 47921096 47921316 + 0.58239619684445 NA Intergenic Intergenic -61949 NR_111900 20563 Mm.289739 NM_178804 ENSMUSG00000031558 Slit2 Drad-1|E030015M03Rik|E130320P19Rik|Slil3|b2b1200.1Clo|mKIAA4141|slit-2 slit guidance ligand 2 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-14 chr3 116847822 116848019 + 0.58239619684445 NA Intergenic Intergenic -11647 NM_001113478 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-22 chr5 21487671 21487926 + 0.58239619684445 NA intron (NM_001199632, intron 19 of 20) intron (NM_001199632, intron 19 of 20) -55729 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-10 chr4 45476050 45476374 + 0.58239619684445 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 54616 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-3 chr10 94480330 94480665 + 0.58239619684445 NA intron (NM_001359762, intron 2 of 4) intron (NM_001359762, intron 2 of 4) -34360 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-13 chr14 29969116 29969500 + 0.58239619684445 NA intron (NM_019979, intron 1 of 4) intron (NM_019979, intron 1 of 4) 928 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-30 chr8 47935939 47936202 + 0.58239619684445 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 54481 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-22 chr2 90543129 90543454 + 0.58239619684445 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 37356 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445-5 chr17 8801877 8802203 + 0.58239619684445 NA 5' UTR (NM_011866, exon 1 of 22) 5' UTR (NM_011866, exon 1 of 22) 295 NM_011866 23984 Mm.87161 NM_011866 ENSMUSG00000023868 Pde10a - phosphodiesterase 10A protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-16 chr15 77866336 77866608 + 0.58239619684445 NA Intergenic Intergenic -24297 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-12 chr5 39641456 39641839 + 0.58239619684445 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 2984 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-26 chr3 85813874 85814177 + 0.58239619684445 NA Intergenic Intergenic -67816 NM_172682 229488 Mm.119926 NM_172682 ENSMUSG00000051000 Fam160a1 9930021J17Rik family with sequence similarity 160, member A1 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-13 chr6 146111323 146111590 + 0.58239619684445 NA 3' UTR (NM_010586, exon 56 of 56) 3' UTR (NM_010586, exon 56 of 56) 177334 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-25 chr3 57397014 57397403 + 0.58239619684445 NA Intergenic Intergenic -28202 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-10 chr2 118658676 118658968 + 0.58239619684445 NA Intergenic Intergenic -4755 NM_001033254 214230 Mm.241857 NM_001033254 ENSMUSG00000074923 Pak6 4732456M09 p21 (RAC1) activated kinase 6 protein-coding common_peak1_12_17_-0.737331847413954_3.80125907773534_0.58239619684445 chr4 58186241 58186440 + 0.58239619684445 NA intron (NM_022814, intron 1 of 47) RSINE1|SINE|B4 20256 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-6 chr13 42866707 42867120 + 0.58239619684445 NA intron (NM_001302636, intron 1 of 12) intron (NM_001302636, intron 1 of 12) 666 NM_001302636 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-20 chr18 34599918 34600210 + 0.58239619684445 NA 3' UTR (NM_001289606, exon 21 of 21) 3' UTR (NM_001289606, exon 21 of 21) -2596 NR_152400 271508 Mm.417609 NM_177773 ENSMUSG00000049357 4933408B17Rik - RIKEN cDNA 4933408B17 gene protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-9 chr3 70805884 70806209 + 0.58239619684445 NA intron (NR_040556, intron 1 of 3) intron (NR_040556, intron 1 of 3) 1245 NR_040556 625901 Mm.366028 NR_040556 ENSMUSG00000097252 Gm6634 EG625901 predicted gene 6634 ncRNA common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-3 chr12 105003812 105004119 + 0.58239619684445 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -5288 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-17 chr8 115703045 115703252 + 0.58239619684445 NA TTS (NM_001025577) TTS (NM_001025577) 3746 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-17 chr15 80067748 80068108 + 0.58239619684445 NA Intergenic Intergenic 10651 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445-2 chr13 13162689 13162889 + 0.58239619684445 NA Intergenic AT_rich|Low_complexity|Low_complexity -19927 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-2 chr1 160053787 160054229 + 0.58239619684445 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 9628 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-9 chr15 6254275 6254502 + 0.58239619684445 NA Intergenic Intergenic -45401 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-23 chr6 34910615 34910809 + 0.58239619684445 NA exon (NM_001013366, exon 1 of 15) exon (NM_001013366, exon 1 of 15) 119 NM_001013366 101240 Mm.152120 NM_001013366 ENSMUSG00000058486 Wdr91 9530020G05Rik|AI987683|AU018665 WD repeat domain 91 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-2 chr1 194838095 194838376 + 0.58239619684445 NA Intergenic Intergenic 16234 NR_039539 100628615 NR_039539 ENSMUSG00000092633 Mir3962 mmu-mir-3962|mu-mir-3962 microRNA 3962 ncRNA common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-12 chr4 141281664 141282058 + 0.58239619684445 NA Intergenic Intergenic 3422 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-21 chr19 43915467 43915722 + 0.58239619684445 NA intron (NM_028029, intron 1 of 15) intron (NM_028029, intron 1 of 15) 24604 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-2 chr10 24476551 24476878 + 0.58239619684445 NA Intergenic Intergenic -118728 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-17 chr5 144953767 144953992 + 0.58239619684445 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 11951 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-28 chr6 72521731 72522131 + 0.58239619684445 NA Intergenic Intergenic -22460 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-6 chr19 36491227 36491529 + 0.58239619684445 NA Intergenic Intergenic -63261 NM_001163471 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain E3 ubiquitin protein ligase 2 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-17 chr19 56976930 56977273 + 0.58239619684445 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 31474 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-20 chr3 79629172 79629437 + 0.58239619684445 NA promoter-TSS (NM_025794) promoter-TSS (NM_025794) 225 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-11 chr4 116150091 116150320 + 0.58239619684445 NA promoter-TSS (NM_026651) promoter-TSS (NM_026651) -313 NM_029786 68273 Mm.196045 NM_026651 ENSMUSG00000028700 Pomgnt1 0610016I07Rik|4930467B06Rik protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein-coding unique_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445 chr19 46042551 46042843 + 0.58239619684445 NA intron (NM_001113408, intron 1 of 10) intron (NM_001113408, intron 1 of 10) 2614 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-3 chr11 118004119 118004421 + 0.58239619684445 NA intron (NR_151726, intron 6 of 9) intron (NR_151726, intron 6 of 9) 2000 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-9 chr17 84255691 84255939 + 0.58239619684445 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -67868 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-5 chr13 15805703 15805940 + 0.58239619684445 NA Intergenic Intergenic -1422 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-16 chr5 64389850 64390149 + 0.58239619684445 NA Intergenic Intergenic 77943 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-27 chr8 68101998 68102288 + 0.58239619684445 NA Intergenic Intergenic -127569 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-29 chr7 83429616 83429950 + 0.58239619684445 NA Intergenic B3A|SINE|B2 -155148 NM_177695 233424 Mm.486619 NM_177695 ENSMUSG00000038540 Tmc3 9030203A06 transmembrane channel-like gene family 3 protein-coding common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445-7 chr5 122707770 122707970 + 0.58239619684445 NA intron (NM_001310718, intron 1 of 10) CpG 326 NM_001310718 18438 Mm.290884 NM_011026 ENSMUSG00000029470 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445 chr1 62968128 62968524 + 0.58239619684445 NA Intergenic Intergenic 145941 NM_001081436 227195 Mm.74718 NM_001081436 ENSMUSG00000040865 Ino80d 7330405I11|A430093A21Rik|BC010584 INO80 complex subunit D protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-14 chr6 33805238 33805679 + 0.58239619684445 NA intron (NM_009148, intron 11 of 17) intron (NM_009148, intron 11 of 17) -223990 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-16 chr8 25466414 25466629 + 0.58239619684445 NA Intergenic Intergenic -52238 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-6 chr12 80114874 80115076 + 0.58239619684445 NA Intergenic Intergenic -1962 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-32 chr8 104382180 104382457 + 0.58239619684445 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 13489 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-7 chr11 101848484 101849106 + 0.58239619684445 NA Intergenic Intergenic 45559 NM_010791 17285 Mm.3404 NM_010791 ENSMUSG00000001493 Meox1 AI385561|D330041M02Rik|Mox-1|Mox1 mesenchyme homeobox 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-24 chr3 55114444 55114812 + 0.58239619684445 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 2462 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-8 chr13 99397908 99398232 + 0.58239619684445 NA intron (NM_173757, intron 4 of 10) intron (NM_173757, intron 4 of 10) 14756 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-34 chr9 107950550 107950802 + 0.58239619684445 NA promoter-TSS (NM_011634) promoter-TSS (NM_011634) -287 NM_011634 22036 Mm.297870 NM_011634 ENSMUSG00000032586 Traip Trip TRAF-interacting protein protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-15 chr15 25348974 25349266 + 0.58239619684445 NA Intergenic Intergenic 64644 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-11 chr17 14173093 14173368 + 0.58239619684445 NA Intergenic Intergenic 30601 NM_172826 240025 Mm.79993 NM_172826 ENSMUSG00000048826 Dact2 2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2 dishevelled-binding antagonist of beta-catenin 2 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-8 chr16 26581861 26582215 + 0.58239619684445 NA intron (NR_152416, intron 1 of 12) MIR3|SINE|MIR 333 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-23 chr2 109699917 109700374 + 0.58239619684445 NA intron (NM_001285417, intron 1 of 1) intron (NM_001285417, intron 1 of 1) 5736 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445-4 chr14 46636813 46637031 + 0.58239619684445 NA intron (NR_046460, intron 1 of 4) intron (NR_046460, intron 1 of 4) 501 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA unique_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445-2 chr16 4606916 4607187 + 0.58239619684445 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 12338 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-18 chr2 60210829 60211124 + 0.58239619684445 NA intron (NM_020575, intron 1 of 9) intron (NM_020575, intron 1 of 9) 1040 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-11 chr4 126532886 126533230 + 0.58239619684445 NA intron (NM_153177, intron 1 of 17) CpG 400 NM_153177 76850 Mm.86705 NM_153177 ENSMUSG00000042500 Ago4 5730550L01Rik|AI481660|Eif2c4 argonaute RISC catalytic subunit 4 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-8 chr11 103267882 103268132 + 0.58239619684445 NA promoter-TSS (NM_016896) promoter-TSS (NM_016896) -606 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-27 chr6 8258724 8259043 + 0.58239619684445 NA promoter-TSS (NM_001302353) promoter-TSS (NM_001302353) 258 NM_026632 68240 Mm.29073 NM_026632 ENSMUSG00000012483 Rpa3 14kDa|C330026P08Rik replication protein A3 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-21 chr4 130171720 130171958 + 0.58239619684445 NA intron (NM_001168333, intron 3 of 11) intron (NM_001168333, intron 3 of 11) 2963 NM_001168333 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-11 chr13 45462053 45462469 + 0.58239619684445 NA Intergenic Intergenic -45183 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-7 chr2 119350629 119350928 + 0.58239619684445 NA promoter-TSS (NM_026929) promoter-TSS (NM_026929) -464 NM_026929 69065 Mm.35083 NM_026929 ENSMUSG00000027313 Chac1 1810008K03Rik ChaC, cation transport regulator 1 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-10 chr16 49859294 49859495 + 0.58239619684445 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 3740 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445 chr1 45756309 45756621 + 0.58239619684445 NA Intergenic Intergenic -38701 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-4 chr11 77792466 77792788 + 0.58239619684445 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) -8671 NM_001291214 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445 chr1 60097575 60097861 + 0.58239619684445 NA promoter-TSS (NM_139150) promoter-TSS (NM_139150) 189 NM_021312 57750 Mm.281079 NM_021312 ENSMUSG00000026019 Wdr12 4933402C23Rik|Ytm1|Ytm1p WD repeat domain 12 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-11 chr15 99295596 99295934 + 0.58239619684445 NA intron (NM_018786, intron 1 of 25) intron (NM_018786, intron 1 of 25) 524 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-7 chr13 94139817 94140078 + 0.58239619684445 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 82151 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-7 chr16 11062904 11063166 + 0.58239619684445 NA Intergenic Intergenic -3263 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-12 chr13 102015829 102016094 + 0.58239619684445 NA Intergenic Intergenic -247744 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-4 chr17 12288917 12289318 + 0.58239619684445 NA intron (NM_001357722, intron 1 of 25) intron (NM_001357722, intron 1 of 25) 29543 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-18 chr9 59487224 59487469 + 0.58239619684445 NA promoter-TSS (NM_019927) promoter-TSS (NM_019927) -972 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-2 chr11 35474306 35474625 + 0.58239619684445 NA intron (NM_011412, intron 4 of 35) intron (NM_011412, intron 4 of 35) -142351 NR_029799 723924 NR_029799 ENSMUSG00000065583 Mir218-2 Mirn218-2|mir-218-2 microRNA 218-2 ncRNA unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-14 chr18 46864266 46864682 + 0.58239619684445 NA intron (NM_029008, intron 1 of 19) intron (NM_029008, intron 1 of 19) 14435 NM_029008 74574 Mm.26379 NM_029008 ENSMUSG00000024481 Lvrn 4833403I15Rik|APQ|Aqpep laeverin protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-5 chr12 108422688 108422985 + 0.58239619684445 NA promoter-TSS (NM_001043335) promoter-TSS (NM_001043335) 20 NM_001043335 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-5 chr11 69122018 69122466 + 0.58239619684445 NA intron (NM_033041, intron 3 of 3) CpG 1789 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hes family bHLH transcription factor 7 protein-coding unique_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445-3 chr3 152194037 152194366 + 0.58239619684445 NA promoter-TSS (NM_025926) promoter-TSS (NM_025926) -356 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445 chr1 137078999 137079278 + 0.58239619684445 NA Intergenic Intergenic -118690 NM_030676 26424 Mm.16794 NM_030676 ENSMUSG00000026398 Nr5a2 AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B nuclear receptor subfamily 5, group A, member 2 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-18 chr8 36899922 36900297 + 0.58239619684445 NA intron (NM_001194940, intron 2 of 17) intron (NM_001194940, intron 2 of 17) 52333 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445 chr10 19598525 19598757 + 0.58239619684445 NA intron (NM_010511, intron 2 of 6) intron (NM_010511, intron 2 of 6) 6692 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-15 chr18 75319664 75319944 + 0.58239619684445 NA Intergenic Intergenic -22475 NR_045393 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-26 chr8 54216632 54216934 + 0.58239619684445 NA Intergenic Intergenic 139251 NM_009506 22341 Mm.1402 NM_009506 ENSMUSG00000031520 Vegfc AW228853|VEGF-C vascular endothelial growth factor C protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-19 chrX 103710458 103710757 + 0.58239619684445 NA intron (NM_009197, intron 2 of 5) intron (NM_009197, intron 2 of 5) 80021 NM_029158 75064 Mm.159414 NM_029158 ENSMUSG00000031330 Zcchc13 4930513O09Rik|Cnbp2 zinc finger, CCHC domain containing 13 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-3 chr11 20934409 20934645 + 0.58239619684445 NA Intergenic Intergenic -103419 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-10 chr12 86787543 86787863 + 0.58239619684445 NA Intergenic ID_B1|SINE|B4 53334 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-16 chr19 16328580 16328801 + 0.58239619684445 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -13686 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-6 chr13 15806410 15806606 + 0.58239619684445 NA promoter-TSS (NR_046131) promoter-TSS (NR_046131) -735 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-6 chr11 101417362 101417715 + 0.58239619684445 NA promoter-TSS (NM_144829) promoter-TSS (NM_144829) -105 NM_144829 69684 Mm.146283 NM_144829 ENSMUSG00000075528 Aarsd1 1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II alanyl-tRNA synthetase domain containing 1 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-6 chr13 6475356 6475607 + 0.58239619684445 NA Intergenic Intergenic -72676 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-5 chr11 107341649 107341988 + 0.58239619684445 NA intron (NR_153311, intron 1 of 9) intron (NR_153311, intron 1 of 9) 128902 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-10 chr19 18811071 18811287 + 0.58239619684445 NA intron (NM_153417, intron 14 of 38) intron (NM_153417, intron 14 of 38) 61196 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-12 chr16 45887652 45888048 + 0.58239619684445 NA Intergenic Intergenic -43099 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-13 chr3 68677205 68677505 + 0.58239619684445 NA Intergenic Intergenic -13289 NM_001159424 16159 Mm.103783 NM_008351 ENSMUSG00000027776 Il12a IL-12p35|Il-12a|Ll12a|p35 interleukin 12a protein-coding common_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-13 chr7 28940093 28940331 + 0.58239619684445 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 22120 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_20_11_0.534627174871468_3.85227608815689_0.58239619684445-2 chr1 182510632 182510999 + 0.58239619684445 NA intron (NM_009794, intron 2 of 20) B1_Mus1|SINE|Alu 6795 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-14 chr14 121037648 121038077 + 0.58239619684445 NA intron (NM_134082, intron 1 of 26) intron (NM_134082, intron 1 of 26) 2288 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445 chr1 72236683 72236948 + 0.58239619684445 NA Intergenic CpG -7178 NR_155355 320933 Mm.440953 NR_155355 D230017M19Rik B930094L07Rik RIKEN cDNA D230017M19 gene ncRNA common_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-3 chr11 72760404 72760711 + 0.58239619684445 NA intron (NM_009671, intron 22 of 24) intron (NM_009671, intron 22 of 24) 35282 NM_001024926 192986 Mm.194755 NM_001024926 ENSMUSG00000057778 Cyb5d2 9330151E16Rik|Gm2 cytochrome b5 domain containing 2 protein-coding common_peak2_20_11_0.534627174871468_3.85227608815689_0.58239619684445-3 chr8 122179043 122179288 + 0.58239619684445 NA Intergenic Intergenic -102976 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_12_17_-0.737331847413954_3.80125907773534_0.58239619684445-11 chr2 38681965 38682203 + 0.58239619684445 NA Intergenic Intergenic 30150 NM_001316687 26423 Mm.31387 NM_139051 ENSMUSG00000026751 Nr5a1 Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1|STF-1 nuclear receptor subfamily 5, group A, member 1 protein-coding common_peak2_19_11_0.464734442250518_3.81732972184642_0.58239619684445-6 chr2 93902402 93902603 + 0.58239619684445 NA Intergenic Intergenic -33345 NM_001033452 381411 Mm.9889 NM_001033452 ENSMUSG00000075023 Accsl Gm1967 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like protein-coding unique_peak1_19_11_0.464734442250518_3.81732972184642_0.58239619684445-31 chr8 54563658 54563975 + 0.58239619684445 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 13485 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak2_110_107_-0.250146138451815_6.62981443293756_0.582092378886036 chr4 143160925 143162112 + 0.582092378886036 NA intron (NM_001256380, intron 6 of 7) intron (NM_001256380, intron 6 of 7) -25356 NR_105988 102465618 NR_105988 ENSMUSG00000106597 Mir7021 mmu-mir-7021 microRNA 7021 ncRNA common_peak1_130_91_0.218500352385377_6.6328121322497_0.582092378886036 chr8 46941272 46942965 + 0.582092378886036 NA Intergenic Intergenic -44769 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_71_72_-0.305168289780557_6.03724041398974_0.581628126678288-3 chr4 84674259 84674922 + 0.581628126678288 NA intron (NM_172870, intron 1 of 5) CpG 496 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak1_71_72_-0.305168289780557_6.03724041398974_0.581628126678288-2 chr2 137716335 137717472 + 0.581628126678288 NA Intergenic Intergenic -539681 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_71_72_-0.305168289780557_6.03724041398974_0.581628126678288-2 chr14 20641040 20641581 + 0.581628126678288 NA Intergenic CpG 15230 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding common_peak1_71_72_-0.305168289780557_6.03724041398974_0.581628126678288 chr17 80479430 80480738 + 0.581628126678288 NA 5' UTR (NM_009231, exon 1 of 22) 5' UTR (NM_009231, exon 1 of 22) 369 NM_009231 20662 Mm.60975 NM_009231 ENSMUSG00000024241 Sos1 4430401P03Rik|9630010N06|AI449023 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding common_peak2_71_72_-0.305168289780557_6.03724041398974_0.581628126678288 chr11 106500986 106501730 + 0.581628126678288 NA TTS (NR_030703) TTS (NR_030703) 367 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak2_71_72_-0.305168289780557_6.03724041398974_0.581628126678288-4 chr7 55793700 55794701 + 0.581628126678288 NA promoter-TSS (NM_001360874) promoter-TSS (NM_001360874) 75 NM_001360873 233276 Mm.284306 NM_146190 ENSMUSG00000033790 Tubgcp5 B130010C12Rik|GCP5|mKIAA1899 tubulin, gamma complex associated protein 5 protein-coding common_peak2_71_72_-0.305168289780557_6.03724041398974_0.581628126678288-5 chr7 75848393 75849628 + 0.581628126678288 NA intron (NM_029652, intron 1 of 2) intron (NM_029652, intron 1 of 2) 672 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_87_59_0.265229827415297_6.03950550931617_0.581628126678276-3 chr3 122618936 122619614 + 0.581628126678276 NA intron (NM_001114665, intron 1 of 15) CpG 439 NM_153118 214459 Mm.209491 NM_153118 ENSMUSG00000039735 Fnbp1l 2610318I01Rik|AW548221|TOCA1|toca-1 formin binding protein 1-like protein-coding common_peak1_87_59_0.265229827415297_6.03950550931617_0.581628126678276-2 chr3 49685858 49686873 + 0.581628126678276 NA Intergenic Intergenic 70951 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak2_87_59_0.265229827415297_6.03950550931617_0.581628126678276-2 chr9 59656597 59657600 + 0.581628126678276 NA intron (NM_001253883, intron 1 of 10) CpG 730 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak2_87_59_0.265229827415297_6.03950550931617_0.581628126678276 chr7 89562944 89563674 + 0.581628126678276 NA Intergenic Intergenic -36122 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_87_59_0.265229827415297_6.03950550931617_0.581628126678276 chr16 20535549 20536227 + 0.581628126678276 NA intron (NM_001302970, intron 1 of 10) intron (NM_001302970, intron 1 of 10) 408 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak1_258_235_-0.164133217876757_7.80057644042346_0.581606777855465 chr15 76455633 76458150 + 0.581606777855465 NA promoter-TSS (NM_198885) promoter-TSS (NM_198885) -547 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak1_100_69_0.240214882312447_6.24939045810119_0.581432897068483 chr9 99568133 99569314 + 0.581432897068483 NA 5' UTR (NM_001166138, exon 1 of 12) 5' UTR (NM_001166138, exon 1 of 12) 176 NM_001166138 74125 Mm.234823 NM_028768 ENSMUSG00000032468 Armc8 1200015K23Rik|Gid5|HSPC056 armadillo repeat containing 8 protein-coding common_peak1_101_69_0.254328463045695_6.25644724846781_0.581432897068483 chr8 71312538 71313726 + 0.581432897068483 NA intron (NM_001142322, intron 2 of 39) intron (NM_001142322, intron 2 of 39) 40418 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak2_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-5 chr8 106192405 106192873 + 0.581176766834141 NA non-coding (NR_151676, exon 4 of 9) non-coding (NR_151676, exon 4 of 9) 18294 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak2_32_36_-0.442387381231192_4.98825967501335_0.581176766834141 chr11 101465098 101465701 + 0.581176766834141 NA intron (NM_012037, intron 1 of 5) intron (NM_012037, intron 1 of 5) 800 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141 chr1 135374390 135375165 + 0.581176766834141 NA intron (NM_175259, intron 1 of 4) intron (NM_175259, intron 1 of 4) 286 NM_175259 77552 Mm.41407 NM_175259 ENSMUSG00000041889 Shisa4 9330132O05Rik|Tmem58|mShisa4 shisa family member 4 protein-coding unique_peak2_32_36_-0.442387381231192_4.98825967501335_0.581176766834141 chr14 66095471 66096088 + 0.581176766834141 NA intron (NM_007940, intron 9 of 18) intron (NM_007940, intron 9 of 18) 14881 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-4 chr14 47373680 47374372 + 0.581176766834141 NA intron (NM_001145953, intron 1 of 5) CpG 166 NM_001145953 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-12 chr9 114390218 114390667 + 0.581176766834141 NA exon (NM_019922, exon 1 of 7) exon (NM_019922, exon 1 of 7) 270 NM_019922 56693 Mm.20904 NM_019922 ENSMUSG00000032431 Crtap 5730529N23Rik|CASP|Leprel3|P3h5 cartilage associated protein protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-6 chr17 84113708 84114115 + 0.581176766834141 NA Intergenic Intergenic 35251 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-4 chr6 17494581 17495345 + 0.581176766834141 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 31006 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-4 chr8 121907131 121907548 + 0.581176766834141 NA promoter-TSS (NM_001033485) promoter-TSS (NM_001033485) 347 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-7 chr18 66458341 66458959 + 0.581176766834141 NA promoter-TSS (NM_021451) promoter-TSS (NM_021451) 46 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding common_peak1_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-5 chr9 59291776 59292300 + 0.581176766834141 NA intron (NM_001359282, intron 1 of 6) intron (NM_001359282, intron 1 of 6) 466 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding common_peak2_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-3 chr2 125301723 125302181 + 0.581176766834141 NA exon (NM_007993, exon 66 of 66) exon (NM_007993, exon 66 of 66) 54437 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-10 chr5 112294609 112295191 + 0.581176766834141 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 18209 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-8 chr3 126385469 126385779 + 0.581176766834141 NA intron (NM_173451, intron 1 of 1) intron (NM_173451, intron 1 of 1) 21772 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding common_peak1_32_36_-0.442387381231192_4.98825967501335_0.581176766834141 chr1 132288450 132288785 + 0.581176766834141 NA Intergenic Intergenic -10009 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak2_43_27_0.371820480539457_4.99326516232733_0.581176766834141-2 chr6 58831940 58832668 + 0.581176766834141 NA intron (NM_001361967, intron 1 of 22) intron (NM_001361967, intron 1 of 22) 839 NM_001361966 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-2 chr11 43895617 43896122 + 0.581176766834141 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) 5368 NM_001284380 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_43_27_0.371820480539457_4.99326516232733_0.581176766834141 chr11 100527326 100527839 + 0.581176766834141 NA intron (NM_134037, intron 1 of 27) CpG 418 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-5 chr17 74088374 74089117 + 0.581176766834141 NA Intergenic Intergenic -40829 NM_053188 94224 Mm.38933 NM_053188 ENSMUSG00000038541 Srd5a2 5ART2|S5AR 2 steroid 5 alpha-reductase 2 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-11 chr9 4375854 4376244 + 0.581176766834141 NA promoter-TSS (NM_145609) promoter-TSS (NM_145609) -503 NM_145609 78100 Mm.206549 NM_145609 ENSMUSG00000041124 Msantd4 8430410K20Rik|Mysantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-9 chr4 107603130 107603722 + 0.581176766834141 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 80163 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-2 chr10 11343200 11343659 + 0.581176766834141 NA promoter-TSS (NM_010146) promoter-TSS (NM_010146) -16 NM_010146 13853 Mm.89946 NM_010146 ENSMUSG00000055493 Epm2a TG-B|Tg(TcraK,TcrbK)TG-BFlv epilepsy, progressive myoclonic epilepsy, type 2 gene alpha protein-coding common_peak1_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-3 chr8 121239212 121239647 + 0.581176766834141 NA Intergenic MLT1K|LTR|ERVL-MaLR 111744 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_32_36_-0.442387381231192_4.98825967501335_0.581176766834141-2 chr15 3878121 3878869 + 0.581176766834141 NA Intergenic Intergenic 101078 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141-3 chr10 60805046 60805500 + 0.581176766834141 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 26308 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_43_27_0.371820480539457_4.99326516232733_0.581176766834141 chr7 90308289 90308813 + 0.581176766834141 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 6196 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_75_50_0.289683133000407_5.8172669084717_0.580755936662264-2 chr4 43578692 43579564 + 0.580755936662264 NA promoter-TSS (NM_172692) promoter-TSS (NM_172692) -264 NM_172692 230101 Mm.229444 NM_172692 ENSMUSG00000028467 Gba2 F630034E04 glucosidase beta 2 protein-coding common_peak2_74_50_0.270709122408268_5.80777990317563_0.580755936662264 chr16 37815015 37815783 + 0.580755936662264 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 38344 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_74_50_0.270709122408268_5.80777990317563_0.580755936662264 chr13 23368679 23369210 + 0.580755936662264 NA 5' UTR (NM_001286155, exon 1 of 5) 5' UTR (NM_001286155, exon 1 of 5) 264 NM_001286156 218100 Mm.286454 NM_172586 ENSMUSG00000046351 Zfp322a Znf322|Znf322a zinc finger protein 322A protein-coding common_peak1_75_50_0.289683133000407_5.8172669084717_0.580755936662264-2 chr7 64249029 64249705 + 0.580755936662264 NA TTS (NR_105844) TTS (NR_105844) 732 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA common_peak2_75_50_0.289683133000407_5.8172669084717_0.580755936662264 chr15 85523827 85524520 + 0.580755936662264 NA Intergenic Intergenic -20946 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak1_75_50_0.289683133000407_5.8172669084717_0.580755936662264 chr15 84191835 84192522 + 0.580755936662264 NA promoter-TSS (NM_178614) promoter-TSS (NM_178614) -55 NM_178614 68653 Mm.290725 NM_178614 ENSMUSG00000022437 Samm50 1110030L07Rik SAMM50 sorting and assembly machinery component protein-coding common_peak2_75_50_0.289683133000407_5.8172669084717_0.580755936662264-3 chr8 26158840 26159209 + 0.580755936662264 NA intron (NM_199042, intron 1 of 2) intron (NM_199042, intron 1 of 2) 855 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_60_62_-0.330123854197041_5.8122179964014_0.58075593666224-3 chr9 35117162 35118015 + 0.58075593666224 NA promoter-TSS (NM_009178) promoter-TSS (NM_009178) -724 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 SIAT4-C|ST3Gal IV|ST3GalIV|Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding common_peak1_60_62_-0.330123854197041_5.8122179964014_0.58075593666224 chr5 66543109 66543853 + 0.58075593666224 NA 5' UTR (NM_001201413, exon 2 of 17) 5' UTR (NM_001201413, exon 2 of 17) 75336 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak2_60_62_-0.330123854197041_5.8122179964014_0.58075593666224 chr9 6429044 6430143 + 0.58075593666224 NA Intergenic Intergenic -163046 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_60_62_-0.330123854197041_5.8122179964014_0.58075593666224-2 chr8 35919618 35920282 + 0.58075593666224 NA Intergenic Intergenic -36993 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_115_80_0.228008038919397_6.45385402234432_0.580562178555123 chr11 118289309 118290156 + 0.580562178555123 NA intron (NM_001033528, intron 1 of 20) intron (NM_001033528, intron 1 of 20) 512 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak2_115_80_0.228008038919397_6.45385402234432_0.580562178555123-2 chr5 121190524 121191314 + 0.580562178555123 NA intron (NM_011202, intron 1 of 15) CpG 478 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak2_165_117_0.198625591955833_6.98195584533976_0.580457197164831 chr19 45018397 45019294 + 0.580457197164831 NA intron (NM_001130526, intron 1 of 4) intron (NM_001130526, intron 1 of 4) 710 NM_001130526 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak1_358_319_-0.135709636613123_8.2540732765808_0.580215684264552 chr15 12320716 12322833 + 0.580215684264552 NA exon (NM_025673, exon 1 of 4) exon (NM_025673, exon 1 of 4) 278 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak2_183_131_0.184349223291313_7.13656873100411_0.580211473172483 chr5 28316545 28317667 + 0.580211473172483 NA promoter-TSS (NM_028234) promoter-TSS (NM_028234) -83 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak2_159_150_-0.209872735073136_7.13346837178851_0.580211473172483 chr8 123477294 123478935 + 0.580211473172483 NA intron (NR_028260, intron 1 of 15) CpG 252 NR_028260 114896 Mm.287475 NM_054070 ENSMUSG00000031967 Afg3l1 1700047G05Rik|3110061K15Rik AFG3-like AAA ATPase 1 protein-coding common_peak2_147_104_0.202605264244831_6.81554814978854_0.580209540366837 chr7 109635694 109637396 + 0.580209540366837 NA Intergenic Intergenic -19398 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961 chr12 108307451 108308251 + 0.580191592425961 NA intron (NM_001044380, intron 1 of 8) intron (NM_001044380, intron 1 of 8) 1581 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-7 chr7 139296046 139296470 + 0.580191592425961 NA Intergenic Intergenic 47776 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_53_34_0.343263833955193_5.30091493392256_0.580191592425961-3 chr4 117550350 117550995 + 0.580191592425961 NA exon (NM_080469, exon 1 of 9) exon (NM_080469, exon 1 of 9) 307 NM_080469 140546 Mm.235891 NM_080469 ENSMUSG00000033423 Eri3 PINT1|Prnpip1 exoribonuclease 3 protein-coding common_peak2_53_34_0.343263833955193_5.30091493392256_0.580191592425961 chr1 5018566 5019186 + 0.580191592425961 NA promoter-TSS (NM_001290372) promoter-TSS (NM_001290372) -142 NM_001290372 58175 Mm.103771 NM_021374 ENSMUSG00000002459 Rgs20 2900073E09Rik|Rgsz1 regulator of G-protein signaling 20 protein-coding common_peak2_52_34_0.316487038324894_5.28752653610741_0.580191592425961-4 chr14 30903368 30904242 + 0.580191592425961 NA Intergenic B1_Mur1|SINE|Alu 17329 NM_001289632 16427 Mm.34819 NM_018746 ENSMUSG00000021922 Itih4 ITI-HC4|Itih-4|PK-120 inter alpha-trypsin inhibitor, heavy chain 4 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-4 chr19 6254253 6254709 + 0.580191592425961 NA intron (NM_194348, intron 24 of 39) intron (NM_194348, intron 24 of 39) -10162 NR_029830 723957 NR_029830 ENSMUSG00000065582 Mir194-2 Mirn194-2|mir-194-2 microRNA 194-2 ncRNA common_peak1_53_34_0.343263833955193_5.30091493392256_0.580191592425961 chr1 64942193 64942745 + 0.580191592425961 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 14355 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-2 chr13 114876391 114876965 + 0.580191592425961 NA intron (NM_008396, intron 7 of 29) intron (NM_008396, intron 7 of 29) 55422 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5|GPIa integrin alpha 2 protein-coding common_peak2_52_34_0.316487038324894_5.28752653610741_0.580191592425961-3 chr11 89060117 89060527 + 0.580191592425961 NA promoter-TSS (NR_110336) promoter-TSS (NR_110336) 426 NM_019505 56077 Mm.153695 NM_019505 ENSMUSG00000000276 Dgke C87606|DAGK6|DGK diacylglycerol kinase, epsilon protein-coding common_peak1_53_34_0.343263833955193_5.30091493392256_0.580191592425961-3 chr2 29889853 29890353 + 0.580191592425961 NA promoter-TSS (NM_013615) promoter-TSS (NM_013615) 40 NM_013615 18286 Mm.330116 NM_013615 ENSMUSG00000026790 Odf2 AI848335|MMTEST29 outer dense fiber of sperm tails 2 protein-coding common_peak1_53_34_0.343263833955193_5.30091493392256_0.580191592425961-2 chr10 83321118 83321885 + 0.580191592425961 NA intron (NM_177388, intron 1 of 10) intron (NM_177388, intron 1 of 10) 16316 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak2_52_34_0.316487038324894_5.28752653610741_0.580191592425961-6 chr8 36027373 36027864 + 0.580191592425961 NA Intergenic Intergenic -67210 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-8 chr9 69471880 69472458 + 0.580191592425961 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 15225 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak2_52_34_0.316487038324894_5.28752653610741_0.580191592425961-2 chr11 32533385 32533932 + 0.580191592425961 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 392 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_53_34_0.343263833955193_5.30091493392256_0.580191592425961-2 chr18 67311465 67311989 + 0.580191592425961 NA intron (NM_053261, intron 5 of 7) intron (NM_053261, intron 5 of 7) 22504 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_53_34_0.343263833955193_5.30091493392256_0.580191592425961-5 chr4 156227932 156228549 + 0.580191592425961 NA TTS (NM_198305) TTS (NM_198305) 302 NM_001008233 231002 Mm.423124 NM_001008233 ENSMUSG00000078485 Plekhn1 BC025458 pleckstrin homology domain containing, family N member 1 protein-coding common_peak2_53_34_0.343263833955193_5.30091493392256_0.580191592425961-4 chr9 72532329 72532685 + 0.580191592425961 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 267 NM_001033536 319758 Mm.32081 NM_001033536 ENSMUSG00000037674 Rfx7 2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2 regulatory factor X, 7 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-6 chr6 50110190 50111018 + 0.580191592425961 NA promoter-TSS (NM_001361247) promoter-TSS (NM_001361247) -256 NM_001361247 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-3 chr16 78301785 78302618 + 0.580191592425961 NA intron (NM_001025192, intron 1 of 6) CpG 530 NM_001276263 13052 Mm.66222 NM_009988 ENSMUSG00000022865 Cxadr 2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR coxsackie virus and adenovirus receptor protein-coding common_peak2_52_34_0.316487038324894_5.28752653610741_0.580191592425961 chr10 86289559 86290083 + 0.580191592425961 NA intron (NM_013722, intron 6 of 13) PB1D11|SINE|Alu -10591 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_53_34_0.343263833955193_5.30091493392256_0.580191592425961-4 chr4 155085738 155086323 + 0.580191592425961 NA promoter-TSS (NM_001081100) promoter-TSS (NM_001081100) 267 NM_026395 67830 Mm.241604 NM_026395 ENSMUSG00000029048 Rer1 1110060F11Rik|5830454N22Rik|AU043380 retention in endoplasmic reticulum sorting receptor 1 protein-coding common_peak1_52_34_0.316487038324894_5.28752653610741_0.580191592425961-5 chr3 84813695 84814363 + 0.580191592425961 NA Intergenic CpG -1548 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_52_34_0.316487038324894_5.28752653610741_0.580191592425961-5 chr15 80710782 80711110 + 0.580191592425961 NA promoter-TSS (NM_144812) promoter-TSS (NM_144812) -367 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-4 chr5 64174867 64175706 + 0.580191592425955 NA intron (NM_019636, intron 2 of 19) MER2|DNA|TcMar-Tigger 15026 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-6 chr4 114601031 114601466 + 0.580191592425955 NA intron (NM_001085549, intron 5 of 6) intron (NM_001085549, intron 5 of 6) 194524 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955 chr1 88878092 88878748 + 0.580191592425955 NA Intergenic C-rich|Low_complexity|Low_complexity 123530 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-7 chr4 136145991 136146727 + 0.580191592425955 NA TTS (NM_008321) TTS (NM_008321) 2537 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak1_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-3 chr16 57606484 57607062 + 0.580191592425955 NA promoter-TSS (NM_025599) promoter-TSS (NM_025599) 94 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak1_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-2 chr12 52503016 52503547 + 0.580191592425955 NA Intergenic Intergenic -12796 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak1_40_44_-0.413838549155993_5.28493382175168_0.580191592425955 chr1 182409129 182409619 + 0.580191592425955 NA 5' UTR (NM_173378, exon 1 of 18) 5' UTR (NM_173378, exon 1 of 18) 207 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-10 chr8 107502493 107503038 + 0.580191592425955 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -48479 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-2 chr10 14463049 14463992 + 0.580191592425955 NA intron (NM_001002268, intron 4 of 24) intron (NM_001002268, intron 4 of 24) 81516 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-9 chr8 25305300 25305693 + 0.580191592425955 NA intron (NR_040352, intron 2 of 2) intron (NR_040352, intron 2 of 2) 774 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-3 chr10 81996944 81997292 + 0.580191592425955 NA Intergenic CpG -51005 NM_001319203 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-8 chr5 148756825 148757249 + 0.580191592425955 NA Intergenic Intergenic 15197 NR_028285 70138 Mm.417834 NR_028285 ENSMUSG00000086494 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene ncRNA common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-4 chr11 84880458 84881006 + 0.580191592425955 NA promoter-TSS (NM_001077636) promoter-TSS (NM_001077636) -447 NM_001077636 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding common_peak2_40_44_-0.413838549155993_5.28493382175168_0.580191592425955-5 chr2 85037201 85037699 + 0.580191592425955 NA promoter-TSS (NM_001136081) promoter-TSS (NM_001136081) -1 NM_001136081 20833 Mm.219793 NM_182990 ENSMUSG00000027067 Ssrp1 C81323|Hmg1-rs1|Hmgi-rs3|Hmgox|T160 structure specific recognition protein 1 protein-coding common_peak1_25_29_-0.481352421153406_4.66621438503182_0.580176690544129 chr1 36326626 36326971 + 0.580176690544129 NA Intergenic Intergenic 19065 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak2_34_21_0.391924373908506_4.65539380559155_0.580176690544129-3 chr3 27616622 27617020 + 0.580176690544129 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -31826 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak2_34_21_0.391924373908506_4.65539380559155_0.580176690544129 chr13 74617614 74618104 + 0.580176690544129 NA Intergenic Intergenic -21994 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 A-LAP|ARTS-1|Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-7 chr17 83955290 83955758 + 0.580176690544129 NA Intergenic Intergenic -43028 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA unique_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-2 chr15 99126980 99127445 + 0.580176690544129 NA intron (NM_139140, intron 1 of 12) CpG 367 NM_139140 72572 Mm.276650 NM_139140 ENSMUSG00000051934 Spats2 2700012F11Rik|59kDa|Scr59|p59 spermatogenesis associated, serine-rich 2 protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-5 chr14 54225260 54225756 + 0.580176690544129 NA Intergenic Intergenic 28421 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-12 chr5 123981172 123981722 + 0.580176690544129 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 7819 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak1_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-5 chrX 12855884 12856396 + 0.580176690544129 NA Intergenic Intergenic -80733 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129 chr1 71649290 71649867 + 0.580176690544129 NA intron (NM_001276412, intron 3 of 44) intron (NM_001276412, intron 3 of 44) 3656 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-2 chr10 25273298 25273973 + 0.580176690544129 NA intron (NM_018747, intron 3 of 7) URR1B|DNA|hAT-Charlie 25528 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding unique_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129 chr1 75436021 75436602 + 0.580176690544129 NA 5' UTR (NM_001357170, exon 1 of 13) 5' UTR (NM_001357170, exon 1 of 13) 375 NM_001357169 69080 Mm.23951 NM_133708 ENSMUSG00000033021 Gmppa 1810012N01Rik GDP-mannose pyrophosphorylase A protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-8 chr4 47310318 47310814 + 0.580176690544129 NA exon (NM_009928, exon 38 of 40) exon (NM_009928, exon 38 of 40) -42656 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-5 chr2 32682327 32682852 + 0.580176690544129 NA TTS (NM_010236) TTS (NM_010236) 5177 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak1_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-2 chr5 129715594 129716107 + 0.580176690544129 NA 5' UTR (NM_001356955, exon 2 of 4) 5' UTR (NM_001356955, exon 2 of 4) 353 NM_001356959 66258 Mm.249809 NM_025450 ENSMUSG00000034211 Mrps17 1810006P02Rik|Mprs17 mitochondrial ribosomal protein S17 protein-coding common_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-2 chr2 103760676 103761101 + 0.580176690544129 NA intron (NM_153126, intron 1 of 28) CpG 382 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-11 chr4 123616797 123617162 + 0.580176690544129 NA TTS (NR_105824) TTS (NR_105824) 559 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-2 chr13 5869328 5869782 + 0.580176690544129 NA 3' UTR (NM_011803, exon 4 of 4) 3' UTR (NM_011803, exon 4 of 4) 8066 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129 chr1 93167170 93167518 + 0.580176690544129 NA Intergenic Intergenic -1079 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding unique_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-4 chr18 33667490 33667969 + 0.580176690544129 NA Intergenic Intergenic -127163 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129 chr10 60209591 60209945 + 0.580176690544129 NA intron (NM_016803, intron 1 of 3) MIRb|SINE|MIR 9492 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-2 chr11 48873291 48873922 + 0.580176690544129 NA Intergenic Intergenic -2186 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-3 chr6 43247164 43247446 + 0.580176690544129 NA Intergenic Intergenic 11695 NM_146370 18346 Mm.222840 NM_146370 ENSMUSG00000061210 Olfr47 IB12|MOR261-9|Olfr13 olfactory receptor 47 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-6 chr16 77644000 77644315 + 0.580176690544129 NA Intergenic Intergenic -2116 NR_029540 723952 NR_029540 ENSMUSG00000065472 Mir125b-2 Mirn125b-2|mir-125b-2 microRNA 125b-2 ncRNA unique_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-3 chr2 3118327 3118931 + 0.580176690544129 NA promoter-TSS (NM_001347067) promoter-TSS (NM_001347067) -56 NM_001347067 269233 Mm.23044 NM_001081161 ENSMUSG00000050530 Fam171a1 9630050M13Rik|AA409679 family with sequence similarity 171, member A1 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-4 chr11 120598704 120599253 + 0.580176690544129 NA promoter-TSS (NM_011568) promoter-TSS (NM_011568) 446 NM_001038230 66156 Mm.21645 NM_025389 ENSMUSG00000025135 Anapc11 1110011I19Rik|R75218 anaphase promoting complex subunit 11 protein-coding unique_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-6 chr5 110107164 110107670 + 0.580176690544129 NA intron (NM_145147, intron 1 of 9) CpG-11316 780 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-15 chr8 117347995 117348407 + 0.580176690544129 NA promoter-TSS (NM_028941) promoter-TSS (NM_028941) -969 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-4 chr13 3537605 3537891 + 0.580176690544129 NA promoter-TSS (NM_008112) promoter-TSS (NM_008112) -327 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-11 chr8 35606299 35606954 + 0.580176690544129 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -17606 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129 chr14 31891905 31892389 + 0.580176690544129 NA Intergenic Intergenic -61732 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-14 chr8 105533587 105533946 + 0.580176690544129 NA intron (NM_013477, intron 2 of 7) intron (NM_013477, intron 2 of 7) 15020 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-3 chr11 49246558 49247055 + 0.580176690544129 NA promoter-TSS (NM_001110149) promoter-TSS (NM_001110149) -671 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-5 chr16 20537522 20538008 + 0.580176690544129 NA intron (NM_001302970, intron 2 of 10) intron (NM_001302970, intron 2 of 10) 2285 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-10 chr2 164512648 164513310 + 0.580176690544129 NA Intergenic L2a|LINE|L2 15454 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding unique_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129 chr19 44282364 44282902 + 0.580176690544129 NA Intergenic Intergenic -11043 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-7 chr17 47694873 47695532 + 0.580176690544129 NA promoter-TSS (NM_001290337) promoter-TSS (NM_001290337) -5 NM_144939 107971 Mm.392206 NM_144939 ENSMUSG00000023266 Frs3 4930417B13Rik|AI449674|Frs2beta|Snt2 fibroblast growth factor receptor substrate 3 protein-coding common_peak1_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-3 chr6 47772199 47772406 + 0.580176690544129 NA Intergenic CpG -19377 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-7 chr2 69885209 69885607 + 0.580176690544129 NA non-coding (NR_110977, exon 1 of 6) non-coding (NR_110977, exon 1 of 6) 207 NM_029280 75422 Mm.10508 NM_029280 ENSMUSG00000051730 Mettl5 2810410A08Rik methyltransferase like 5 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-10 chr6 66998513 66999212 + 0.580176690544129 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -37737 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-6 chr17 6001378 6001846 + 0.580176690544129 NA intron (NM_001357667, intron 4 of 24) intron (NM_001357667, intron 4 of 24) -5968 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-13 chr7 141564125 141564620 + 0.580176690544129 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 2192 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-4 chr8 60758955 60759239 + 0.580176690544129 NA Intergenic Intergenic 103540 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding unique_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-2 chr12 118540308 118540762 + 0.580176690544129 NA Intergenic Intergenic -10342 NR_045947 100384890 Mm.484658 NR_045947 ENSMUSG00000113875 D230030E09Rik Npe Riken cDNA D230030E09 gene ncRNA common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-4 chr15 99851457 99851827 + 0.580176690544129 NA intron (NM_001113545, intron 1 of 10) B1_Mur4|SINE|Alu 23814 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_34_21_0.391924373908506_4.65539380559155_0.580176690544129-4 chr3 57505132 57505492 + 0.580176690544129 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 70564 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-5 chr15 89428564 89429244 + 0.580176690544129 NA intron (NM_007692, intron 2 of 10) intron (NM_007692, intron 2 of 10) 1023 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding unique_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-2 chr15 59828158 59828450 + 0.580176690544129 NA Intergenic Intergenic -33345 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-10 chr7 111029104 111029467 + 0.580176690544129 NA intron (NM_009431, intron 1 of 24) CpG 334 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-9 chr2 32607269 32607571 + 0.580176690544129 NA intron (NM_001025310, intron 1 of 5) intron (NM_001025310, intron 1 of 5) 435 NR_110347 50935 Mm.88831 NM_016973 ENSMUSG00000026811 St6galnac6 ST6GalNAcVI|Siat7f ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-6 chr17 46681113 46681622 + 0.580176690544129 NA promoter-TSS (NM_027910) promoter-TSS (NM_027910) 187 NM_001277312 17256 Mm.329083 NM_010787 ENSMUSG00000002768 Mea1 Mea-1 male enhanced antigen 1 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-3 chr13 108158088 108158545 + 0.580176690544129 NA promoter-TSS (NM_001362403) promoter-TSS (NM_001362403) 309 NM_001360140 75597 Mm.276040 NM_001127346 ENSMUSG00000068184 Ndufaf2 1810058I14Rik|C86051|Ndufa12l|mimitin NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 protein-coding common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-8 chr2 39065670 39066089 + 0.580176690544129 NA promoter-TSS (NM_029793) promoter-TSS (NM_029793) -338 NM_029793 76899 Mm.131098 NM_029793 ENSMUSG00000026754 Golga1 0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97 golgi autoantigen, golgin subfamily a, 1 protein-coding common_peak1_24_29_-0.537536753882967_4.63812221866704_0.580176690544129 chr17 71195017 71195553 + 0.580176690544129 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) -9369 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-3 chr11 94161554 94161854 + 0.580176690544129 NA Intergenic Intergenic -49750 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak2_24_29_-0.537536753882967_4.63812221866704_0.580176690544129-9 chr7 98558129 98558648 + 0.580176690544129 NA Intergenic Intergenic 64166 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-8 chr17 84626850 84627411 + 0.580176690544129 NA intron (NM_172256, intron 1 of 12) intron (NM_172256, intron 1 of 12) 631 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding common_peak2_34_21_0.391924373908506_4.65539380559155_0.580176690544129-2 chr15 80083619 80083916 + 0.580176690544129 NA promoter-TSS (NM_013762) promoter-TSS (NM_013762) -361 NM_013762 27367 Mm.290771 NM_013762 ENSMUSG00000060036 Rpl3 F2|J1 ribosomal protein L3 protein-coding common_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129 chr11 69765992 69766260 + 0.580176690544129 NA intron (NM_029348, intron 1 of 3) CpG 214 NM_029348 75580 Mm.426361 NM_029348 ENSMUSG00000018750 Zbtb4 2310026P19Rik|9230111I22Rik|mKIAA1538 zinc finger and BTB domain containing 4 protein-coding unique_peak1_34_21_0.391924373908506_4.65539380559155_0.580176690544129-3 chr18 11883137 11883536 + 0.580176690544129 NA intron (NM_022021, intron 2 of 8) intron (NM_022021, intron 2 of 8) -42898 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak2_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-9 chr4 137048115 137048609 + 0.580176690544129 NA intron (NM_198248, intron 1 of 18) CpG 333 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak1_25_29_-0.481352421153406_4.66621438503182_0.580176690544129-4 chr8 91998721 91999139 + 0.580176690544129 NA Intergenic Intergenic -197276 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding common_peak1_111_108_-0.25059519013149_6.64288672971118_0.579275704045706 chr4 149978815 149979706 + 0.579275704045706 NA TTS (NM_173371) TTS (NM_173371) 23976 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_131_92_0.213797214143239_6.64605741817965_0.579275704045706 chr12 80114911 80116277 + 0.579275704045706 NA Intergenic CpG -2581 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak2_112_108_-0.237861623116674_6.64925351321859_0.579275704045706 chr6 83054653 83055392 + 0.579275704045706 NA promoter-TSS (NM_019752) promoter-TSS (NM_019752) -451 NM_019752 64704 Mm.21880 NM_019752 ENSMUSG00000068329 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 protein-coding common_peak2_111_108_-0.25059519013149_6.64288672971118_0.579275704045706 chr10 116267118 116268235 + 0.579275704045706 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -33698 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_1044_888_-0.079248835871212_9.75641519089416_0.578495205516635 chr8 25097754 25103507 + 0.578495205516635 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 1181 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_144_136_-0.210517142402624_6.99277351175921_0.578253273323342 chr4 132210566 132212092 + 0.578253273323342 NA intron (NM_145393, intron 2 of 4) CpG 927 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding common_peak1_143_136_-0.22043079343431_6.98781668624337_0.578253273323342 chr13 108042764 108044273 + 0.578253273323342 NA promoter-TSS (NM_001048250) promoter-TSS (NM_001048250) -956 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak2_166_118_0.195054608718601_6.99234506766724_0.578253273323342 chr1 136344779 136346305 + 0.578253273323342 NA 5' UTR (NM_001347110, exon 1 of 17) 5' UTR (NM_001347110, exon 1 of 17) 562 NM_001347109 67886 Mm.144143 NM_001081360 ENSMUSG00000041570 Camsap2 1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078 calmodulin regulated spectrin-associated protein family, member 2 protein-coding common_peak1_184_132_0.181225245163642_7.14589505808301_0.578235475637259 chr19 4113355 4114665 + 0.578235475637259 NA TTS (NR_075078) TTS (NR_075078) 7565 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak1_184_132_0.181225245163642_7.14589505808301_0.578235475637259-2 chr19 4395871 4397085 + 0.578235475637259 NA 5' UTR (NM_001001984, exon 1 of 21) 5' UTR (NM_001001984, exon 1 of 21) 599 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding common_peak2_63_42_0.28966533036921_5.5710974198867_0.578228366855311-3 chr3 52763570 52764226 + 0.578228366855311 NA intron (NR_038079, intron 1 of 3) intron (NR_038079, intron 1 of 3) 24174 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_64_42_0.31187533893365_5.58220242416892_0.578228366855311-5 chr9 41660075 41661137 + 0.578228366855311 NA Intergenic Intergenic 78680 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak1_64_42_0.31187533893365_5.58220242416892_0.578228366855311-4 chr2 30709596 30710153 + 0.578228366855311 NA Intergenic Intergenic -11336 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_50_53_-0.364221042599562_5.57277698086369_0.578228366855311 chr2 120730767 120731415 + 0.578228366855311 NA exon (NM_026891, exon 2 of 28) exon (NM_026891, exon 2 of 28) 426 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding common_peak1_64_42_0.31187533893365_5.58220242416892_0.578228366855311-3 chr2 19658329 19659298 + 0.578228366855311 NA promoter-TSS (NR_033642) promoter-TSS (NR_033642) 751 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding common_peak1_50_53_-0.364221042599562_5.57277698086369_0.578228366855311-2 chr4 58188643 58189294 + 0.578228366855311 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 17628 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_64_42_0.31187533893365_5.58220242416892_0.578228366855311-2 chr17 13760723 13761459 + 0.578228366855311 NA intron (NR_151731, intron 1 of 33) CpG 303 NM_022311 21646 Mm.486358 NM_022311 ENSMUSG00000038347 Tcte2 AI429268|Tcte-2 t-complex-associated testis expressed 2 protein-coding common_peak2_63_42_0.28966533036921_5.5710974198867_0.578228366855311 chr10 80741554 80742181 + 0.578228366855311 NA intron (NM_007460, intron 1 of 30) CpG 408 NM_007460 11776 Mm.27082 NM_007460 ENSMUSG00000020198 Ap3d1 AA407035|Ap3d|Bolvr|mBLVR1|mh|mocha adaptor-related protein complex 3, delta 1 subunit protein-coding common_peak1_63_42_0.28966533036921_5.5710974198867_0.578228366855311 chr1 155558133 155558818 + 0.578228366855311 NA 5' UTR (NM_028250, exon 1 of 8) 5' UTR (NM_028250, exon 1 of 8) 355 NM_028250 72482 Mm.288249 NM_026683 ENSMUSG00000033701 Acbd6 0610010G04Rik|2610100E10Rik acyl-Coenzyme A binding domain containing 6 protein-coding common_peak1_64_42_0.31187533893365_5.58220242416892_0.578228366855311 chr14 25525477 25526280 + 0.578228366855311 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -8561 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_63_42_0.28966533036921_5.5710974198867_0.578228366855311-3 chr3 88579688 88580660 + 0.578228366855311 NA intron (NM_025448, intron 1 of 4) (TGAA)n|Simple_repeat|Simple_repeat 566 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak2_50_53_-0.364221042599562_5.57277698086369_0.578228366855311 chr11 97418780 97419550 + 0.578228366855311 NA Intergenic Intergenic -30995 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_63_42_0.28966533036921_5.5710974198867_0.578228366855311-2 chr19 17011455 17011944 + 0.578228366855311 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 55581 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak2_50_53_-0.364221042599562_5.57277698086369_0.578228366855311 chr2 132263289 132264127 + 0.578228366855311 NA intron (NM_001291040, intron 1 of 3) CpG 560 NM_138651 110911 Mm.284503 NM_138651 ENSMUSG00000058793 Cds2 5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding common_peak1_63_42_0.28966533036921_5.5710974198867_0.578228366855311-4 chr4 40757336 40757808 + 0.578228366855311 NA intron (NM_021535, intron 1 of 11) CpG 313 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_63_42_0.28966533036921_5.5710974198867_0.578228366855311-2 chr12 111304549 111305622 + 0.578228366855311 NA exon (NM_183016, exon 26 of 37) exon (NM_183016, exon 26 of 37) 33989 NM_033603 93835 Mm.197639 NM_033603 ENSMUSG00000021278 Amn - amnionless protein-coding common_peak2_50_53_-0.364221042599562_5.57277698086369_0.578228366855311-2 chr18 64515853 64516472 + 0.578228366855311 NA intron (NM_001142950, intron 1 of 14) intron (NM_001142950, intron 1 of 14) 395 NM_027350 70223 Mm.29192 NM_027350 ENSMUSG00000024587 Nars 3010001M15Rik|AA960128|ASNRS|C78150 asparaginyl-tRNA synthetase protein-coding unique_peak1_63_42_0.28966533036921_5.5710974198867_0.578228366855311 chr5 99224185 99225149 + 0.578228366855311 NA intron (NM_181318, intron 10 of 13) intron (NM_181318, intron 10 of 13) 28260 NM_181318 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak2_63_42_0.28966533036921_5.5710974198867_0.578228366855311-4 chr4 141444696 141445096 + 0.578228366855311 NA intron (NM_009541, intron 1 of 15) CpG 223 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak2_292_214_0.147010125127909_7.82169791215341_0.577878777215336 chr5 123138361 123140319 + 0.577878777215336 NA Intergenic Intergenic -2853 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak1_102_70_0.247840245553545_6.27366724228146_0.577781149297765 chr3 30011955 30013375 + 0.577781149297765 NA 5' UTR (NM_007963, exon 1 of 15) 5' UTR (NM_007963, exon 1 of 15) 539 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding common_peak2_85_84_-0.270203385501513_6.27428924338695_0.577781149297765 chr10 60577500 60578569 + 0.577781149297765 NA intron (NM_001252635, intron 7 of 68) ID_B1|SINE|B4 118456 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding common_peak1_85_84_-0.270203385501513_6.27428924338695_0.577781149297765 chr4 139535536 139536616 + 0.577781149297765 NA intron (NM_183148, intron 3 of 11) intron (NM_183148, intron 3 of 11) 5528 NM_183148 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_102_70_0.247840245553545_6.27366724228146_0.577781149297765-2 chr5 108268518 108269508 + 0.577781149297765 NA 5' UTR (NM_026106, exon 1 of 3) 5' UTR (NM_026106, exon 1 of 3) 116 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding common_peak2_85_84_-0.270203385501513_6.27428924338695_0.577781149297765-3 chr18 46524753 46525736 + 0.577781149297765 NA intron (NM_173423, intron 1 of 2) CpG 727 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak2_85_84_-0.270203385501513_6.27428924338695_0.577781149297765-2 chr13 55212095 55213080 + 0.577781149297765 NA intron (NM_008739, intron 1 of 22) CpG 2805 NM_008739 18193 Mm.168965 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_128_122_-0.222491352475597_6.83126882910144_0.577745173211579 chr1 89655900 89657609 + 0.577745173211579 NA intron (NM_001037136, intron 6 of 16) intron (NM_001037136, intron 6 of 16) 27138 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_128_122_-0.222491352475597_6.83126882910144_0.577745173211579 chr15 62326978 62328369 + 0.577745173211579 NA Intergenic Intergenic -108222 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_148_105_0.198576941962068_6.82720892554423_0.577745173211554 chr4 137356816 137357628 + 0.577745173211554 NA intron (NM_009861, intron 1 of 5) CpG 537 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_98_96_-0.259066235135159_6.47037972461955_0.577395983118086-2 chr12 77971171 77972725 + 0.577395983118086 NA Intergenic Intergenic -254707 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_116_81_0.222602394718694_6.46885320197743_0.577395983118086-3 chr7 45394814 45395719 + 0.577395983118086 NA intron (NR_126539, intron 1 of 9) intron (NR_126539, intron 1 of 9) 476 NM_009224 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding common_peak2_116_81_0.222602394718694_6.46885320197743_0.577395983118086-2 chr3 37348248 37349142 + 0.577395983118086 NA promoter-TSS (NM_008006) promoter-TSS (NM_008006) 42 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak1_117_81_0.234794101131351_6.47494905518376_0.577395983118086-2 chr8 25720033 25720743 + 0.577395983118086 NA TTS (NM_001081269) TTS (NM_001081269) 340 NR_121643 71910 Mm.385055 NM_028000 ENSMUSG00000031570 Plpp5 1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1|Ppapdc1b phospholipid phosphatase 5 protein-coding common_peak1_116_81_0.222602394718694_6.46885320197743_0.577395983118086-2 chr17 88065186 88065807 + 0.577395983118086 NA promoter-TSS (NM_001081034) promoter-TSS (NM_001081034) -205 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_98_96_-0.259066235135159_6.47037972461955_0.577395983118086 chr11 86577554 86578225 + 0.577395983118086 NA Intergenic Intergenic 6269 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_98_96_-0.259066235135159_6.47037972461955_0.577395983118086-3 chr12 111376286 111377487 + 0.577395983118086 NA intron (NM_183016, intron 1 of 36) intron (NM_183016, intron 1 of 36) 832 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding common_peak2_116_81_0.222602394718694_6.46885320197743_0.577395983118086 chr19 10043101 10043638 + 0.577395983118086 NA intron (NM_021890, intron 1 of 11) intron (NM_021890, intron 1 of 11) 1821 NM_021890 60527 Mm.253875 NM_021890 ENSMUSG00000024664 Fads3 AI464531 fatty acid desaturase 3 protein-coding common_peak1_117_81_0.234794101131351_6.47494905518376_0.577395983118086 chr15 27380868 27381619 + 0.577395983118086 NA Intergenic Intergenic -85434 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_117_81_0.234794101131351_6.47494905518376_0.577395983118086 chr7 128319610 128320521 + 0.577395983118086 NA Intergenic Intergenic -21934 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak1_116_81_0.222602394718694_6.46885320197743_0.577395983118086 chr13 28917624 28918531 + 0.577395983118086 NA Intergenic Intergenic -32655 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak1_88_60_0.257569888837041_6.05952228198141_0.577394982162938-2 chr16 16983455 16984469 + 0.577394982162938 NA intron (NM_001038663, intron 1 of 7) CpG 580 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_88_60_0.257569888837041_6.05952228198141_0.577394982162938-3 chr7 112377412 112378304 + 0.577394982162938 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 9550 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_88_60_0.257569888837041_6.05952228198141_0.577394982162938-4 chr8 84192376 84193144 + 0.577394982162938 NA Intergenic CpG -13799 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_88_60_0.257569888837041_6.05952228198141_0.577394982162938 chr10 39369804 39370564 + 0.577394982162938 NA 5' UTR (NM_001122892, exon 1 of 13) 5' UTR (NM_001122892, exon 1 of 13) 385 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_88_60_0.257569888837041_6.05952228198141_0.577394982162938-2 chr18 60756603 60757232 + 0.577394982162938 NA Intergenic Intergenic -8252 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_88_60_0.257569888837041_6.05952228198141_0.577394982162938 chr12 102743189 102744275 + 0.577394982162938 NA promoter-TSS (NM_001324515) promoter-TSS (NM_001324515) 13 NM_001324515 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding common_peak2_72_73_-0.305037930063023_6.05693440059744_0.577394982162926-2 chr13 63252875 63253837 + 0.577394982162926 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 13327 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_72_73_-0.305037930063023_6.05693440059744_0.577394982162926-2 chr5 100039471 100040886 + 0.577394982162926 NA promoter-TSS (NM_016690) promoter-TSS (NM_016690) 184 NR_027990 67870 Mm.11311 NM_026421 ENSMUSG00000029326 Enoph1 2310057D15Rik|BB183658|C81437 enolase-phosphatase 1 protein-coding common_peak1_72_73_-0.305037930063023_6.05693440059744_0.577394982162926 chr11 48978809 48979555 + 0.577394982162926 NA 5' UTR (NM_001114679, exon 2 of 4) 5' UTR (NM_001114679, exon 2 of 4) 199 NM_001114679 667214 Mm.441306 NM_001114679 ENSMUSG00000069893 9930111J21Rik1 9930111J21Rik|Iigp RIKEN cDNA 9930111J21 gene 1 protein-coding common_peak2_72_73_-0.305037930063023_6.05693440059744_0.577394982162926 chr12 59219450 59220223 + 0.577394982162926 NA promoter-TSS (NM_001033156) promoter-TSS (NM_001033156) -353 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak2_72_73_-0.305037930063023_6.05693440059744_0.577394982162926-3 chr17 8283004 8284453 + 0.577394982162926 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -85 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak1_72_73_-0.305037930063023_6.05693440059744_0.577394982162926-3 chr8 103373793 103374492 + 0.577394982162926 NA Intergenic Intergenic -26608 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak1_293_215_0.145196284283552_7.82748564430524_0.576658038446159 chr1 58713209 58714899 + 0.576658038446159 NA TTS (NR_149258) TTS (NR_149258) 768 NM_001355056 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_241_220_-0.166646777988351_7.70457917039726_0.576639598206462 chr6 113376949 113378952 + 0.576639598206462 NA promoter-TSS (NM_133932) promoter-TSS (NM_133932) -163 NM_026552 68089 Mm.289306 NM_026552 ENSMUSG00000079426 Arpc4 20kDa|5330419I20Rik|AI327076|p20-Arc actin related protein 2/3 complex, subunit 4 protein-coding common_peak2_363_323_-0.133817717575113_8.27294114409707_0.576599137620596 chr14 31661248 31664024 + 0.576599137620596 NA intron (NM_025295, intron 2 of 3) MER5B|DNA|hAT-Charlie 21579 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak2_133_93_0.219909186389506_6.66454344487239_0.576514982614061 chr9 110688838 110690218 + 0.576514982614061 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 33025 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_132_93_0.209178672868395_6.65917818811184_0.576514982614061 chr17 21532129 21533228 + 0.576514982614061 NA intron (NR_131123, intron 2 of 2) CpG -2861 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak1_167_119_0.191534141264373_7.00265766624071_0.576083871948597 chr15 93397825 93398985 + 0.576083871948597 NA promoter-TSS (NM_175363) promoter-TSS (NM_175363) 55 NM_175363 223828 Mm.74208 NM_146062 ENSMUSG00000036167 Pphln1 CR|HSPC206|HSPC232 periphilin 1 protein-coding common_peak2_180_168_-0.195684846224058_7.30303701317016_0.576083726465039 chr2 167421092 167422559 + 0.576083726465039 NA intron (NM_001304542, intron 1 of 15) CpG 115 NM_001304542 77031 Mm.278924 NM_148929 ENSMUSG00000039463 Slc9a8 1200006P13Rik|6430709P13Rik|AI182282|NHE-8|NHE8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 protein-coding common_peak1_180_168_-0.195684846224058_7.30303701317016_0.576083726465039 chr6 108457671 108459507 + 0.576083726465039 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -31154 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_61_63_-0.329550460447218_5.83522476977639_0.575830045570394-3 chr7 138846443 138847396 + 0.575830045570394 NA promoter-TSS (NM_027115) promoter-TSS (NM_027115) 533 NM_026391 52432 Mm.258739 NM_026391 ENSMUSG00000041769 Ppp2r2d 1300017E19Rik|D7Ertd753e|MDS026 protein phosphatase 2, regulatory subunit B, delta protein-coding common_peak1_61_63_-0.329550460447218_5.83522476977639_0.575830045570394 chr11 16829768 16830590 + 0.575830045570394 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 77976 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_61_63_-0.329550460447218_5.83522476977639_0.575830045570394-3 chr9 56504915 56505790 + 0.575830045570394 NA Intergenic Intergenic 86733 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_61_63_-0.329550460447218_5.83522476977639_0.575830045570394 chr12 87471650 87472295 + 0.575830045570394 NA intron (NM_025507, intron 1 of 13) CpG 327 NM_025507 66354 Mm.271174 NM_025507 ENSMUSG00000021039 Snw1 2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip SNW domain containing 1 protein-coding common_peak1_61_63_-0.329550460447218_5.83522476977639_0.575830045570394-2 chr5 135934774 135935635 + 0.575830045570394 NA promoter-TSS (NM_018871) promoter-TSS (NM_018871) -563 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak2_61_63_-0.329550460447218_5.83522476977639_0.575830045570394-2 chr6 47594220 47594993 + 0.575830045570394 NA intron (NM_007971, intron 1 of 19) CpG 424 NM_001146689 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak1_61_63_-0.329550460447218_5.83522476977639_0.575830045570394-4 chr9 36796784 36797269 + 0.575830045570394 NA promoter-TSS (NM_007915) promoter-TSS (NM_007915) 42 NM_007915 13663 Mm.4337 NM_007915 ENSMUSG00000062762 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA protein-coding common_peak1_76_51_0.280394734030097_5.84063708515614_0.575830045570382 chr16 32657133 32657870 + 0.575830045570382 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 10696 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak1_76_51_0.280394734030097_5.84063708515614_0.575830045570382-2 chr5 139912678 139913703 + 0.575830045570382 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 5247 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_76_51_0.280394734030097_5.84063708515614_0.575830045570382-3 chr7 5061264 5062013 + 0.575830045570382 NA promoter-TSS (NM_133671) promoter-TSS (NM_133671) -505 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-9 chr3 121889456 121889821 + 0.575340103425218 NA Intergenic Intergenic -63591 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-9 chr9 21321691 21322042 + 0.575340103425218 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) 1147 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-3 chr1 182515624 182515981 + 0.575340103425218 NA intron (NM_009794, intron 1 of 20) ID_B1|SINE|B4 1808 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-6 chr6 84270892 84271260 + 0.575340103425218 NA Intergenic Intergenic 152762 NR_046063 100038556 Mm.387783 NR_046063 ENSMUSG00000107797 Gm10445 - predicted gene 10445 ncRNA common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-11 chr8 126874199 126874494 + 0.575340103425218 NA Intergenic Intergenic 25326 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218 chr1 74015570 74015959 + 0.575340103425218 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 108683 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-8 chr3 57522418 57522666 + 0.575340103425218 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 53334 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218 chr1 182515658 182515922 + 0.575340103425218 NA intron (NM_009794, intron 1 of 20) intron (NM_009794, intron 1 of 20) 1820 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-10 chr6 50395146 50395419 + 0.575340103425218 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -12445 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-7 chr17 35814625 35815032 + 0.575340103425218 NA Intergenic Intergenic -6885 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-2 chr13 52080669 52081045 + 0.575340103425218 NA Intergenic Intergenic -15884 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-2 chr1 158733382 158733721 + 0.575340103425218 NA intron (NM_001085376, intron 20 of 21) intron (NM_001085376, intron 20 of 21) 223887 NM_001085376 23850 Mm.458621 NM_001085376 ENSMUSG00000073530 Pappa2 PAPP-A2|PLAC3|Pappe pappalysin 2 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-12 chr9 107307321 107307580 + 0.575340103425218 NA Intergenic Intergenic 10791 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-6 chr16 92300758 92301129 + 0.575340103425218 NA promoter-TSS (NM_138743) promoter-TSS (NM_138743) -360 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-4 chr18 68140557 68141010 + 0.575340103425218 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -87163 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-7 chr9 102735776 102736088 + 0.575340103425218 NA Intergenic Intergenic -3716 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-3 chr16 23496407 23496824 + 0.575340103425218 NA intron (NM_001359083, intron 2 of 10) intron (NM_001359083, intron 2 of 10) 24200 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-5 chr16 18235304 18235634 + 0.575340103425218 NA promoter-TSS (NM_172151) promoter-TSS (NM_172151) -333 NM_172151 27801 Mm.326263 NM_172151 ENSMUSG00000060166 Zdhhc8 D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1 zinc finger, DHHC domain containing 8 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218 chr11 96351145 96351485 + 0.575340103425218 NA promoter-TSS (NM_134032) promoter-TSS (NM_134032) -317 NM_134032 103889 Mm.281153 NM_134032 ENSMUSG00000075588 Hoxb2 AI894218|Hox-2.8|Hoxbes2 homeobox B2 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-6 chr6 22280980 22281399 + 0.575340103425218 NA Intergenic Intergenic -7038 NM_053116 93735 Mm.137403 NM_053116 ENSMUSG00000029671 Wnt16 E130309I19Rik wingless-type MMTV integration site family, member 16 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-5 chr2 51973123 51973528 + 0.575340103425218 NA promoter-TSS (NM_019401) promoter-TSS (NM_019401) -117 NM_001141948 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-5 chr2 181592304 181592503 + 0.575340103425218 NA promoter-TSS (NM_001164597) promoter-TSS (NM_001164597) 58 NM_001164597 269401 Mm.386888 NM_001164597 ENSMUSG00000000823 Zfp512b Gm632|Znf512b zinc finger protein 512B protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-4 chr15 77847075 77847298 + 0.575340103425218 NA Intergenic Intergenic -5011 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-2 chr10 99173095 99173678 + 0.575340103425218 NA intron (NR_153333, intron 11 of 12) intron (NR_153333, intron 11 of 12) 65251 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 polypeptide N-acetylgalactosaminyltransferase 4 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-7 chr7 112678774 112679155 + 0.575340103425218 NA promoter-TSS (NM_009346) promoter-TSS (NM_009346) -356 NM_001166584 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-13 chrX 6408709 6409214 + 0.575340103425218 NA intron (NM_001040459, intron 1 of 8) intron (NM_001040459, intron 1 of 8) -6781 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-11 chr9 44721578 44721966 + 0.575340103425218 NA intron (NM_153537, intron 4 of 21) intron (NM_153537, intron 4 of 21) 13426 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-3 chr11 106920965 106921180 + 0.575340103425218 NA promoter-TSS (NM_025481) promoter-TSS (NM_025481) -357 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak1_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-4 chr2 153428670 153429088 + 0.575340103425218 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 15600 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-10 chr9 42108551 42109023 + 0.575340103425218 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 15510 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_18_23_-0.608744066602764_4.28059046741977_0.575340103425218-8 chr7 135611079 135611539 + 0.575340103425218 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 5481 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-6 chr16 18194870 18195168 + 0.575340103425215 NA Intergenic Intergenic 18514 NR_027843 66779 Mm.387525 NR_015575 4933432I09Rik - RIKEN cDNA 4933432I09 gene ncRNA unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-11 chr4 119252791 119253347 + 0.575340103425215 NA Intergenic Intergenic -2372 NM_153105 242653 Mm.130701 NM_153105 ENSMUSG00000066058 Cldn19 - claudin 19 protein-coding common_peak2_27_16_0.444236252541586_4.30958096752113_0.575340103425215-3 chr3 145923543 145923931 + 0.575340103425215 NA promoter-TSS (NM_009740) promoter-TSS (NM_009740) -525 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_27_16_0.444236252541586_4.30958096752113_0.575340103425215 chr1 75397641 75398043 + 0.575340103425215 NA intron (NM_001085370, intron 4 of 38) B1_Mus1|SINE|Alu -2243 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-8 chr6 83016656 83017086 + 0.575340103425215 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 16600 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak2_27_16_0.444236252541586_4.30958096752113_0.575340103425215-4 chr5 92750961 92751262 + 0.575340103425215 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 37451 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-4 chr12 4843546 4843838 + 0.575340103425215 NA intron (NM_001170858, intron 1 of 3) intron (NM_001170858, intron 1 of 3) 389 NM_001170858 238037 Mm.146087 NM_173416 ENSMUSG00000051721 Wdcp A430092C04 WD repeat and coiled coil containing protein-coding unique_peak2_27_16_0.444236252541586_4.30958096752113_0.575340103425215 chr17 25844182 25844400 + 0.575340103425215 NA TTS (NM_001163766) TTS (NM_001163766) 560 NM_145999 214952 Mm.40907 NM_145999 ENSMUSG00000025733 Rhot2 Arht2|Miro2 ras homolog family member T2 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215 chr10 19192074 19192457 + 0.575340103425215 NA intron (NR_038021, intron 3 of 3) intron (NR_038021, intron 3 of 3) 25027 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-10 chr2 118045452 118045745 + 0.575340103425215 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 65604 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-5 chr15 38455368 38455671 + 0.575340103425215 NA Intergenic Intergenic 35028 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215 chr1 40441220 40441578 + 0.575340103425215 NA exon (NM_010743, exon 3 of 8) exon (NM_010743, exon 3 of 8) 1770 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-12 chr7 99315773 99316093 + 0.575340103425215 NA intron (NM_001043355, intron 2 of 2) intron (NM_001043355, intron 2 of 2) 37306 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_27_16_0.444236252541586_4.30958096752113_0.575340103425215-2 chr11 119988569 119988869 + 0.575340103425215 NA intron (NM_001037754, intron 6 of 13) intron (NM_001037754, intron 6 of 13) -26048 NR_037225 100526518 NR_037225 ENSMUSG00000105524 Mir3065 mir-3065|mmu-mir-3065 microRNA 3065 ncRNA common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-2 chr10 44877798 44878155 + 0.575340103425215 NA Intergenic Intergenic -189238 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-2 chr11 103116405 103116750 + 0.575340103425215 NA 5' UTR (NM_138753, exon 1 of 1) 5' UTR (NM_138753, exon 1 of 1) 252 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-9 chr19 56374603 56374906 + 0.575340103425215 NA intron (NM_008733, intron 11 of 41) intron (NM_008733, intron 11 of 41) 15284 NM_198059 18175 Mm.386769 NM_008733 ENSMUSG00000049134 Nrap - nebulin-related anchoring protein protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-5 chr11 33747581 33747958 + 0.575340103425215 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) 95816 NM_027398 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-9 chr8 70648520 70648749 + 0.575340103425215 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 11104 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-4 chr11 8656038 8656580 + 0.575340103425215 NA intron (NM_001083587, intron 1 of 30) B2_Mm2|SINE|B2 8226 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-7 chr16 33889767 33890444 + 0.575340103425215 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 60440 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-7 chr5 123508495 123508871 + 0.575340103425215 NA TTS (NM_001289822) TTS (NM_001289822) -1777 NM_198611 231727 Mm.484068 NM_198611 ENSMUSG00000029431 B3gnt4 1010001G17Rik|BGnT-4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-3 chr11 119863689 119864144 + 0.575340103425215 NA intron (NM_028898, intron 20 of 33) intron (NM_028898, intron 20 of 33) -18373 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA unique_peak2_27_16_0.444236252541586_4.30958096752113_0.575340103425215-2 chr3 10342294 10342590 + 0.575340103425215 NA intron (NM_025512, intron 6 of 7) intron (NM_025512, intron 6 of 7) -6786 NM_001010834 241877 Mm.442146 NM_001010834 ENSMUSG00000058921 Slc10a5 Gm405|mP5 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-6 chr4 32466323 32466538 + 0.575340103425215 NA intron (NM_001109661, intron 1 of 4) intron (NM_001109661, intron 1 of 4) 48995 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-13 chr9 115307892 115308400 + 0.575340103425215 NA intron (NM_024222, intron 1 of 15) intron (NM_024222, intron 1 of 15) 2275 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding common_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-3 chr10 77131311 77131693 + 0.575340103425215 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -17797 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_27_16_0.444236252541586_4.30958096752113_0.575340103425215-8 chr19 56201463 56201901 + 0.575340103425215 NA Intergenic Intergenic -86230 NM_001329936 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding common_peak2_150_106_0.204130917855893_6.84353244532909_0.575323971992889 chr3 122205842 122207310 + 0.575323971992889 NA Intergenic Intergenic -38981 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak1_99_97_-0.259465961536145_6.48497686334714_0.574300793406289 chr14 11553320 11554605 + 0.574300793406289 NA 5' UTR (NM_008981, exon 1 of 30) 5' UTR (NM_008981, exon 1 of 30) 409 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak1_118_82_0.229395495990413_6.48973717934213_0.574300793406264-2 chr4 149980260 149981746 + 0.574300793406264 NA 3' UTR (NM_173371, exon 5 of 5) 3' UTR (NM_173371, exon 5 of 5) 22233 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_118_82_0.229395495990413_6.48973717934213_0.574300793406264 chr6 37441095 37442108 + 0.574300793406264 NA intron (NM_178661, intron 1 of 11) intron (NM_178661, intron 1 of 11) 547 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_118_82_0.229395495990413_6.48973717934213_0.574300793406264 chr2 152675299 152676878 + 0.574300793406264 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 6627 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak1_103_71_0.241503213866312_6.29067660837547_0.57422342071824 chr12 110591085 110592037 + 0.57422342071824 NA non-coding (NR_033340, exon 1 of 1) non-coding (NR_033340, exon 1 of 1) 187 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA common_peak2_103_71_0.241503213866312_6.29067660837547_0.57422342071824 chr5 139793031 139794360 + 0.57422342071824 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 2159 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_290_261_-0.148031824472163_7.95940708930137_0.574217756433046 chr10 120474995 120477424 + 0.574217756433046 NA 5' UTR (NM_010441, exon 1 of 5) 5' UTR (NM_010441, exon 1 of 5) 260 NM_001347170 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_202_186_-0.177377368509484_7.45820577563289_0.574019014044169 chr15 81191018 81192566 + 0.574019014044169 NA intron (NR_015603, intron 1 of 1) RMER15|LTR|ERVL 939 NR_015603 67638 Mm.390832 NM_026288 ENSMUSG00000047938 4930483J18Rik - RIKEN cDNA 4930483J18 gene ncRNA common_peak2_227_165_0.160849666279189_7.45546426448652_0.574019014044071 chr3 105958341 105960228 + 0.574019014044071 NA promoter-TSS (NM_027432) promoter-TSS (NM_027432) -214 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak1_146_138_-0.211802306703243_7.01303991937189_0.573948187543352 chr1 88475753 88476996 + 0.573948187543352 NA Intergenic Intergenic 33692 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding common_peak2_146_138_-0.211802306703243_7.01303991937189_0.573948187543352-2 chr4 31963579 31965133 + 0.573948187543352 NA exon (NM_172688, exon 1 of 16) exon (NM_172688, exon 1 of 16) 249 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_146_138_-0.211802306703243_7.01303991937189_0.573948187543352 chr14 70577792 70578827 + 0.573948187543352 NA 5' UTR (NM_001360474, exon 1 of 3) 5' UTR (NM_001360474, exon 1 of 3) 210 NM_001360474 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding common_peak1_134_94_0.215293161749846_6.67750218920587_0.573808562009265 chr17 35000811 35001961 + 0.573808562009265 NA promoter-TSS (NM_033075) promoter-TSS (NM_033075) 479 NM_011690 22321 Mm.28420 NM_011690 ENSMUSG00000007029 Vars Bat6|D17H6S56E|G7a|Vars2 valyl-tRNA synthetase protein-coding common_peak2_114_110_-0.238960645373218_6.6749355436635_0.57380856200924 chr3 37875671 37876694 + 0.57380856200924 NA Intergenic Intergenic -22631 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_89_61_0.250116857466464_6.07925473912011_0.573287859224671 chr1 136684077 136685303 + 0.573287859224671 NA intron (NR_045325, intron 1 of 2) intron (NR_045325, intron 1 of 2) 1061 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak2_89_61_0.250116857466464_6.07925473912011_0.573287859224671-2 chr15 80011285 80012182 + 0.573287859224671 NA intron (NM_011057, intron 1 of 6) intron (NM_011057, intron 1 of 6) 3075 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_89_61_0.250116857466464_6.07925473912011_0.573287859224671 chr15 75909790 75910476 + 0.573287859224671 NA promoter-TSS (NM_001285430) promoter-TSS (NM_001285430) 398 NM_178646 105734 Mm.275583 NM_178646 ENSMUSG00000103906 Tigd5 AA409802|AA409995|AI666797 tigger transposable element derived 5 protein-coding common_peak1_73_74_-0.304912929011683_6.07636222599004_0.573287859224659 chr12 110695535 110696263 + 0.573287859224659 NA intron (NM_010480, intron 1 of 10) CpG 496 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak1_73_74_-0.304912929011683_6.07636222599004_0.573287859224659-2 chr7 51339120 51339915 + 0.573287859224659 NA Intergenic Intergenic -171512 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak2_42_45_-0.377319425847581_5.33490224313322_0.573175361577109-2 chr11 70917001 70917652 + 0.573175361577109 NA exon (NM_001291143, exon 10 of 19) exon (NM_001291143, exon 10 of 19) 52647 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109 chr1 133213170 133213776 + 0.573175361577109 NA Intergenic Intergenic -32624 NM_001160268 240753 Mm.253559 NM_182930 ENSMUSG00000041757 Plekha6 9530028L01Rik|AU042621|Pepp3 pleckstrin homology domain containing, family A member 6 protein-coding common_peak1_42_45_-0.377319425847581_5.33490224313322_0.573175361577109 chr5 142794617 142795042 + 0.573175361577109 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 22558 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109-4 chr4 88935614 88936171 + 0.573175361577109 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 6150 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109-5 chr8 70698202 70698744 + 0.573175361577109 NA 5' UTR (NM_010592, exon 1 of 1) 5' UTR (NM_010592, exon 1 of 1) 734 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak1_42_45_-0.377319425847581_5.33490224313322_0.573175361577109-3 chr7 28158853 28159301 + 0.573175361577109 NA intron (NM_001164655, intron 16 of 19) intron (NM_001164655, intron 16 of 19) -10671 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding unique_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109-2 chr9 41808950 41809849 + 0.573175361577109 NA Intergenic Intergenic 227473 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_42_45_-0.377319425847581_5.33490224313322_0.573175361577109-3 chr14 8102541 8103310 + 0.573175361577109 NA intron (NM_001360314, intron 1 of 19) intron (NM_001360314, intron 1 of 19) 4714 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding common_peak1_42_45_-0.377319425847581_5.33490224313322_0.573175361577109-2 chr6 134090512 134091533 + 0.573175361577109 NA intron (NM_001303102, intron 2 of 8) B4A|SINE|B4 55322 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109-2 chr11 116434214 116434859 + 0.573175361577109 NA intron (NM_176902, intron 1 of 2) CpG 323 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak2_42_45_-0.377319425847581_5.33490224313322_0.573175361577109 chr10 57486459 57487333 + 0.573175361577109 NA promoter-TSS (NR_045353) promoter-TSS (NR_045353) 511 NM_008297 15500 Mm.261395 NM_008297 ENSMUSG00000019878 Hsf2 AI661205 heat shock factor 2 protein-coding common_peak1_41_45_-0.411027260037633_5.3180483260382_0.573175361577109-2 chr2 37359001 37359576 + 0.573175361577109 NA promoter-TSS (NM_026176) promoter-TSS (NM_026176) 44 NM_026176 67466 Mm.30709 NM_026176 ENSMUSG00000009030 Pdcl 1200011E13Rik|AW108059|PhLP1 phosducin-like protein-coding common_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109-3 chr14 31660142 31660840 + 0.573175361577109 NA intron (NM_025295, intron 1 of 3) intron (NM_025295, intron 1 of 3) 19434 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_41_45_-0.411027260037633_5.3180483260382_0.573175361577109 chr1 43238407 43238874 + 0.573175361577109 NA Intergenic Intergenic -41879 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_42_45_-0.377319425847581_5.33490224313322_0.573175361577109-4 chr7 137410523 137411338 + 0.573175361577109 NA promoter-TSS (NM_029886) promoter-TSS (NM_029886) -174 NM_029886 77252 Mm.29184 NM_029886 ENSMUSG00000040139 9430038I01Rik - RIKEN cDNA 9430038I01 gene protein-coding common_peak2_42_45_-0.377319425847581_5.33490224313322_0.573175361577109-4 chr5 114772972 114773418 + 0.573175361577109 NA TTS (NR_027872) TTS (NR_027872) 296 NM_019834 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding unique_peak2_41_45_-0.411027260037633_5.3180483260382_0.573175361577109 chr8 25440324 25441117 + 0.573175361577109 NA Intergenic Intergenic -78039 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-6 chr8 34474948 34475773 + 0.573175361577103 NA Intergenic Intergenic 164956 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-5 chr7 16272859 16273354 + 0.573175361577103 NA TTS (NM_001136471) TTS (NM_001136471) 586 NM_001136270 66300 Mm.218698 NM_001136270 ENSMUSG00000091811 Inafm1 2610014I16Rik|Prr24 InaF motif containing 1 protein-coding common_peak2_54_35_0.328907299908627_5.33437865139663_0.573175361577103-3 chr3 56963172 56963665 + 0.573175361577103 NA Intergenic Intergenic 338570 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_54_35_0.328907299908627_5.33437865139663_0.573175361577103-2 chr18 36669877 36670224 + 0.573175361577103 NA exon (NM_001164406, exon 2 of 4) exon (NM_001164406, exon 2 of 4) 261 NM_001164406 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103 chr11 116623358 116624174 + 0.573175361577103 NA intron (NM_172572, intron 1 of 18) CpG 486 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-7 chr8 111449400 111449866 + 0.573175361577103 NA promoter-TSS (NR_105819) promoter-TSS (NR_105819) -567 NR_105819 common_peak2_54_35_0.328907299908627_5.33437865139663_0.573175361577103-4 chr3 86114015 86114778 + 0.573175361577103 NA intron (NM_001082414, intron 8 of 14) intron (NM_001082414, intron 8 of 14) 24462 NR_004417 19870 NR_004417 ENSMUSG00000064984 Snord73a Rnu73a|U73a small nucleolar RNA, C/D box U73A snoRNA common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-4 chr5 100820482 100820880 + 0.573175361577103 NA intron (NM_172405, intron 1 of 8) CpG 254 NM_172405 70681 Mm.486560 NM_172405 ENSMUSG00000035234 Abraxas1 3830405G04Rik|5630400M01Rik|AI506069|AL024423|AV118690|Ccdc98|Fam175a BRCA1 A complex subunit protein-coding common_peak2_54_35_0.328907299908627_5.33437865139663_0.573175361577103-5 chr6 6113638 6114220 + 0.573175361577103 NA intron (NM_015829, intron 9 of 17) intron (NM_015829, intron 9 of 17) 103244 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding unique_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103 chr15 13211882 13212611 + 0.573175361577103 NA Intergenic Intergenic -38571 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-2 chr9 109038599 109039160 + 0.573175361577103 NA intron (NM_025858, intron 1 of 5) intron (NM_025858, intron 1 of 5) 312 NM_025858 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak2_54_35_0.328907299908627_5.33437865139663_0.573175361577103 chr10 60277725 60278031 + 0.573175361577103 NA intron (NM_011179, intron 1 of 14) CpG 250 NM_001146121 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-2 chr19 16949668 16950335 + 0.573175361577103 NA Intergenic Intergenic -6117 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_54_35_0.328907299908627_5.33437865139663_0.573175361577103-3 chr3 108839932 108840472 + 0.573175361577103 NA intron (NM_011504, intron 1 of 18) CpG 300 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding common_peak2_54_35_0.328907299908627_5.33437865139663_0.573175361577103-6 chr7 64277542 64278080 + 0.573175361577103 NA Intergenic Intergenic -9859 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_151_107_0.20016599323519_6.85497049878106_0.572944811392937 chr11 20740613 20741545 + 0.572944811392937 NA intron (NM_181411, intron 1 of 8) CpG 477 NM_001290545 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding common_peak2_151_107_0.20016599323519_6.85497049878106_0.572944811392937-2 chr11 78370680 78372334 + 0.572944811392937 NA intron (NM_008238, intron 2 of 8) intron (NM_008238, intron 2 of 8) 15101 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-4 chr6 142339967 142340255 + 0.572500200098104 NA Intergenic Intergenic -5586 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-3 chr6 42566379 42567206 + 0.572500200098104 NA Intergenic Intergenic -27772 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding unique_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104 chr8 8274544 8274876 + 0.572500200098104 NA Intergenic Intergenic 386063 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-5 chr8 107503767 107504233 + 0.572500200098104 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -47244 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA common_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-6 chr9 42471736 42472272 + 0.572500200098104 NA intron (NM_173038, intron 1 of 7) intron (NM_173038, intron 1 of 7) 254 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding common_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-2 chr13 112445788 112446365 + 0.572500200098104 NA Intergenic ID4|SINE|ID -17994 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_33_37_-0.438096656107134_5.02887918539002_0.572500200098104 chr11 40692064 40692613 + 0.572500200098104 NA intron (NM_001199274, intron 1 of 6) CpG 344 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_33_37_-0.438096656107134_5.02887918539002_0.572500200098104 chr1 136718220 136718519 + 0.572500200098104 NA intron (NR_037986, intron 2 of 4) intron (NR_037986, intron 2 of 4) 22158 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak1_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-2 chr12 80223219 80223718 + 0.572500200098104 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 36903 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_33_37_-0.438096656107134_5.02887918539002_0.572500200098104-3 chr6 6172971 6173365 + 0.572500200098104 NA intron (NM_001177572, intron 3 of 17) intron (NM_001177572, intron 3 of 17) 44005 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-6 chr7 133098052 133098805 + 0.572500200098098 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -16568 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-5 chr5 145083950 145084531 + 0.572500200098098 NA intron (NM_019767, intron 1 of 9) intron (NM_019767, intron 1 of 9) 371 NM_019767 56443 Mm.371610 NM_019767 ENSMUSG00000029621 Arpc1a 0610010H08Rik|1110030K07Rik|41kDa|AA407347|Sid32|Sid329 actin related protein 2/3 complex, subunit 1A protein-coding unique_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-2 chr19 44107679 44108058 + 0.572500200098098 NA promoter-TSS (NM_007700) promoter-TSS (NM_007700) -391 NM_001162410 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK alpha|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098 chr10 53597578 53598092 + 0.572500200098098 NA intron (NM_025541, intron 1 of 3) CpG 874 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding unique_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098 chr11 103097304 103097959 + 0.572500200098098 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 4027 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-2 chr11 68692182 68692828 + 0.572500200098098 NA intron (NM_175260, intron 1 of 40) intron (NM_175260, intron 1 of 40) 590 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding common_peak2_44_28_0.353387152299012_5.03467457127708_0.572500200098098-2 chr14 47472773 47473369 + 0.572500200098098 NA intron (NM_030236, intron 1 of 1) CpG 510 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak2_44_28_0.353387152299012_5.03467457127708_0.572500200098098-3 chr3 40682885 40683345 + 0.572500200098098 NA intron (NM_175515, intron 7 of 15) intron (NM_175515, intron 7 of 15) -25756 NM_178386 73333 Mm.78691 NM_178386 ENSMUSG00000069041 Slc25a31 1700034J06Rik|Ant4|Sfec solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 protein-coding common_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-4 chr2 29422855 29423583 + 0.572500200098098 NA intron (NM_001290489, intron 2 of 6) intron (NM_001290489, intron 2 of 6) 44705 NM_001290490 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak2_44_28_0.353387152299012_5.03467457127708_0.572500200098098-4 chr5 111227491 111228077 + 0.572500200098098 NA intron (NM_001267622, intron 8 of 22) intron (NM_001267622, intron 8 of 22) -102913 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_44_28_0.353387152299012_5.03467457127708_0.572500200098098 chr11 100770707 100771028 + 0.572500200098098 NA promoter-TSS (NM_031871) promoter-TSS (NM_031871) 90 NM_031871 80860 Mm.37308 NM_031871 ENSMUSG00000017747 Ghdc D11Lgp1e GH3 domain containing protein-coding unique_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-3 chr8 83716654 83717262 + 0.572500200098098 NA intron (NM_197982, intron 1 of 10) intron (NM_197982, intron 1 of 10) 1781 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak1_44_28_0.353387152299012_5.03467457127708_0.572500200098098-3 chr19 28557366 28557810 + 0.572500200098098 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -120636 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_51_54_-0.362876518642791_5.59992145420326_0.572487971606931 chr19 57452867 57453489 + 0.572487971606931 NA exon (NM_028115, exon 1 of 8) exon (NM_028115, exon 1 of 8) 272 NM_028115 72133 Mm.258404 NM_028115 ENSMUSG00000025086 Trub1 2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870 TruB pseudouridine (psi) synthase family member 1 protein-coding common_peak1_51_54_-0.362876518642791_5.59992145420326_0.572487971606931 chr6 134897651 134898251 + 0.572487971606931 NA promoter-TSS (NM_001167696) promoter-TSS (NM_001167696) -10 NR_029441 72813 Mm.409034 NR_029441 ENSMUSG00000100876 2810454H06Rik - RIKEN cDNA 2810454H06 gene ncRNA common_peak2_51_54_-0.362876518642791_5.59992145420326_0.572487971606931-2 chr2 60369903 60370634 + 0.572487971606931 NA intron (NM_013825, intron 2 of 34) intron (NM_013825, intron 2 of 34) 12963 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding common_peak2_65_43_0.300579386187217_5.60972131173091_0.572487971606918-2 chr10 68007501 68008136 + 0.572487971606918 NA intron (NM_001359319, intron 6 of 11) intron (NM_001359319, intron 6 of 11) 28248 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918-5 chr19 18757161 18757893 + 0.572487971606918 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 7544 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918-3 chr11 118360567 118361221 + 0.572487971606918 NA Intergenic Intergenic -5483 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak2_65_43_0.300579386187217_5.60972131173091_0.572487971606918-3 chr10 81136477 81137083 + 0.572487971606918 NA intron (NM_010731, intron 1 of 2) CpG 509 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918-2 chr11 4186836 4187668 + 0.572487971606918 NA intron (NM_134023, intron 1 of 8) intron (NM_134023, intron 1 of 8) 419 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918-4 chr14 28663884 28664878 + 0.572487971606918 NA Intergenic Intergenic 152976 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak2_65_43_0.300579386187217_5.60972131173091_0.572487971606918 chr1 189007164 189007823 + 0.572487971606918 NA intron (NR_153196, intron 1 of 17) CpG 347 NM_001359577 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding common_peak2_65_43_0.300579386187217_5.60972131173091_0.572487971606918-5 chr9 102637886 102638391 + 0.572487971606918 NA Intergenic Intergenic 11842 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918-6 chr19 32755945 32756508 + 0.572487971606918 NA Intergenic CpG -1351 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918 chr10 68007499 68008145 + 0.572487971606918 NA intron (NM_001359319, intron 6 of 11) intron (NM_001359319, intron 6 of 11) 28252 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak1_65_43_0.300579386187217_5.60972131173091_0.572487971606918-7 chr5 145167268 145167858 + 0.572487971606918 NA promoter-TSS (NM_133735) promoter-TSS (NM_133735) 350 NM_001291248 54188 Mm.196884 NM_178576 ENSMUSG00000029625 Cpsf4 30kDa|C79664 cleavage and polyadenylation specific factor 4 protein-coding common_peak2_65_43_0.300579386187217_5.60972131173091_0.572487971606918-4 chr15 3904857 3905315 + 0.572487971606918 NA Intergenic Intergenic 74487 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak1_404_300_0.125309715975304_8.29627453474735_0.572208159014502 chr3 108409533 108412977 + 0.572208159014502 NA intron (NM_001004177, intron 1 of 33) intron (NM_001004177, intron 1 of 33) 4239 NM_017392 53883 Mm.39728 NM_017392 ENSMUSG00000068740 Celsr2 Adgrc2|EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1 cadherin, EGF LAG seven-pass G-type receptor 2 protein-coding common_peak1_251_183_0.155698383043333_7.60141114757868_0.572049719834496 chr15 34441861 34443963 + 0.572049719834496 NA intron (NM_001163485, intron 2 of 4) intron (NM_001163485, intron 2 of 4) 313 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak1_251_183_0.155698383043333_7.60141114757868_0.572049719834496-2 chr19 6363593 6365112 + 0.572049719834496 NA intron (NM_001360393, intron 1 of 11) CpG 662 NR_122118 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak1_170_121_0.193042341863927_7.02725850849485_0.571845439496118 chr10 112928103 112928985 + 0.571845439496118 NA exon (NM_001033474, exon 1 of 1) exon (NM_001033474, exon 1 of 1) 482 NM_001033474 382423 Mm.431239 NM_001033474 ENSMUSG00000074748 Atxn7l3b 4921506J03Rik|6230409E21Rik|AI315132 ataxin 7-like 3B protein-coding common_peak2_274_201_0.146167758206533_7.73129536185506_0.571446529844259 chr15 38456602 38458842 + 0.571446529844259 NA Intergenic Intergenic 32825 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_101_98_-0.245745140088948_6.50648405003514_0.571274244600831 chr13 51887006 51888116 + 0.571274244600831 NA Intergenic MLT1A1|LTR|ERVL-MaLR 40886 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_100_98_-0.259858720822196_6.49942725966851_0.571274244600831 chr3 88553106 88554080 + 0.571274244600831 NA promoter-TSS (NM_033526) promoter-TSS (NM_033526) -123 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak1_100_98_-0.259858720822196_6.49942725966851_0.571274244600831 chr12 85110465 85111491 + 0.571274244600831 NA intron (NM_030225, intron 1 of 14) CpG 145 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak2_101_98_-0.245745140088948_6.50648405003514_0.571274244600831-2 chr7 89515153 89516230 + 0.571274244600831 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 1895 NM_029614 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_100_98_-0.259858720822196_6.49942725966851_0.571274244600831-2 chr15 77855171 77856561 + 0.571274244600831 NA Intergenic Intergenic -13691 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_119_83_0.22410516327388_6.5043700044157_0.571274244600806-2 chr15 81744999 81746169 + 0.571274244600806 NA intron (NM_001081016, intron 1 of 22) intron (NM_001081016, intron 1 of 22) 736 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding common_peak2_119_83_0.22410516327388_6.5043700044157_0.571274244600806 chr15 80914756 80915974 + 0.571274244600806 NA intron (NM_177124, intron 15 of 21) intron (NM_177124, intron 15 of 21) -24674 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_135_95_0.210758397468807_6.69034169945556_0.571154854157985 chr11 86757705 86759178 + 0.571154854157985 NA promoter-TSS (NM_001356393) promoter-TSS (NM_001356393) -874 NM_001356393 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding common_peak2_115_111_-0.239496880253582_6.68760648193081_0.57115485415796 chr19 41482714 41484462 + 0.57115485415796 NA Intergenic Intergenic -41664 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak2_115_111_-0.239496880253582_6.68760648193081_0.57115485415796-2 chr7 43579703 43580756 + 0.57115485415796 NA intron (NM_001357769, intron 1 of 3) intron (NM_001357769, intron 1 of 3) 643 NM_001357769 210105 Mm.234422 NM_172482 ENSMUSG00000030469 Zfp719 8030458J18|9430094P17Rik|C630016O21Rik|mszf6 zinc finger protein 719 protein-coding common_peak1_62_64_-0.32899751478162_5.85786905563764_0.571074946341596 chr6 47594177 47595013 + 0.571074946341596 NA intron (NM_007971, intron 1 of 19) CpG 435 NM_001146689 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak2_62_64_-0.32899751478162_5.85786905563764_0.571074946341596 chr7 113186252 113187132 + 0.571074946341596 NA Intergenic Intergenic -20773 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_77_52_0.271398342546125_5.86361962583626_0.571074946341584-2 chr11 121647763 121648374 + 0.571074946341584 NA intron (NM_178664, intron 4 of 12) intron (NM_178664, intron 4 of 12) 25083 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_77_52_0.271398342546125_5.86361962583626_0.571074946341584-3 chr18 43437578 43438560 + 0.571074946341584 NA exon (NM_001291455, exon 1 of 14) exon (NM_001291455, exon 1 of 14) 217 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak1_77_52_0.271398342546125_5.86361962583626_0.571074946341584 chr3 27858839 27860126 + 0.571074946341584 NA Intergenic Intergenic 36886 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding common_peak2_77_52_0.271398342546125_5.86361962583626_0.571074946341584 chr11 98794505 98795352 + 0.571074946341584 NA promoter-TSS (NM_001361932) promoter-TSS (NM_001361932) -588 NM_001361931 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male specific lethal 1 protein-coding common_peak2_77_52_0.271398342546125_5.86361962583626_0.571074946341584-4 chr2 31152371 31152921 + 0.571074946341584 NA promoter-TSS (NR_040334) promoter-TSS (NR_040334) 330 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_104_72_0.235312056319997_6.30748058704002_0.570756121772392 chr13 41358094 41359011 + 0.570756121772392 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) 449 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_104_72_0.235312056319997_6.30748058704002_0.570756121772392-2 chr2 130905923 130907205 + 0.570756121772392 NA promoter-TSS (NM_009730) promoter-TSS (NM_009730) 69 NM_009730 11990 Mm.119936 NM_009730 ENSMUSG00000027312 Atrn AW558010|Mgca|mg attractin protein-coding common_peak1_87_86_-0.270823072824912_6.30753195943627_0.570756121772392 chr1 40273995 40275246 + 0.570756121772392 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 8034 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_87_86_-0.270823072824912_6.30753195943627_0.570756121772392-2 chr18 34758972 34759745 + 0.570756121772392 NA promoter-TSS (NM_001357456) promoter-TSS (NM_001357456) 31 NM_001357457 66306 Mm.29424 NM_175104 ENSMUSG00000034300 Fam53c 2810012G03Rik|Gm21179 family with sequence similarity 53, member C protein-coding common_peak2_87_86_-0.270823072824912_6.30753195943627_0.570756121772392 chr5 103778216 103779499 + 0.570756121772392 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 24284 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_225_206_-0.170219235412318_7.60837733979317_0.570658394082286 chr5 93265631 93268443 + 0.570658394082286 NA promoter-TSS (NM_007635) promoter-TSS (NM_007635) -536 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_152_108_0.196262757441191_6.86631570349752_0.570606604906936-2 chr13 38527029 38528825 + 0.570606604906936 NA promoter-TSS (NM_001289599) promoter-TSS (NM_001289599) -13 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak2_152_108_0.196262757441191_6.86631570349752_0.570606604906936 chr8 119837959 119839892 + 0.570606604906936 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 1654 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_152_108_0.196262757441191_6.86631570349752_0.570606604906936 chr10 93888864 93890178 + 0.570606604906936 NA intron (NM_019648, intron 2 of 11) CpG 1681 NM_019648 56307 Mm.289329 NM_019648 ENSMUSG00000036112 Metap2 4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2 methionine aminopeptidase 2 protein-coding common_peak1_189_136_0.176678311192012_7.18637123855653_0.570603693728192 chr16 10784827 10786433 + 0.570603693728192 NA promoter-TSS (NM_001271603) promoter-TSS (NM_001271603) -94 NM_001271603 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak1_149_140_-0.203471867592275_7.03781541860266_0.569774871126332 chr4 31963580 31965195 + 0.569774871126332 NA intron (NM_009316, intron 1 of 16) CpG 280 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_271_245_-0.153848586722521_7.86559021197798_0.569553951259147 chr8 40510737 40512560 + 0.569553951259147 NA promoter-TSS (NM_033560) promoter-TSS (NM_033560) 106 NM_001271543 18983 Mm.272551 NM_011135 ENSMUSG00000031601 Cnot7 AU022737|CAF-1|Caf1|Pop2 CCR4-NOT transcription complex, subunit 7 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-4 chr19 5928791 5929075 + 0.569352520859861 NA Intergenic Intergenic -4117 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-3 chr15 84654644 84655180 + 0.569352520859861 NA Intergenic URR1A|DNA|hAT-Charlie -8294 NM_001346662 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-3 chr15 84450831 84451268 + 0.569352520859861 NA Intergenic Intergenic -3952 NM_001163145 72301 Mm.275387 NM_001163145 ENSMUSG00000062760 1810041L15Rik Kiaa1644|Shisal1 RIKEN cDNA 1810041L15 gene protein-coding unique_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-3 chr8 128464790 128465439 + 0.569352520859861 NA intron (NM_001358959, intron 8 of 16) B4|SINE|B4 105873 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-6 chr2 71541332 71541919 + 0.569352520859861 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -3734 NR_002854 111970 Mm.4543 NR_002854 Dlx1as Dix1as|Dlx1os distal-less homeobox 1, antisense ncRNA common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-9 chr2 137693320 137693780 + 0.569352520859861 NA Intergenic Intergenic -563034 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861 chr1 155973407 155973630 + 0.569352520859861 NA promoter-TSS (NM_001039184) promoter-TSS (NM_001039184) -263 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-6 chr2 167539983 167540683 + 0.569352520859861 NA intron (NM_011427, intron 2 of 2) intron (NM_011427, intron 2 of 2) 2138 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861 chr1 91024457 91024830 + 0.569352520859861 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 25916 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-2 chr10 7726049 7726574 + 0.569352520859861 NA intron (NM_011835, intron 1 of 10) intron (NM_011835, intron 1 of 10) 311 NM_011835 23924 Mm.28127 NM_011835 ENSMUSG00000019794 Katna1 - katanin p60 (ATPase-containing) subunit A1 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-2 chr10 44112422 44112782 + 0.569352520859861 NA Intergenic Intergenic -57845 NR_001582 70365 Mm.87073 NR_001582 ENSMUSG00000091358 Speer5-ps1 1700007C10Rik|SPEER-5|Speer5-ps spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1 pseudo unique_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861 chr13 73331023 73331384 + 0.569352520859861 NA intron (NM_053163, intron 1 of 1) CpG 194 NM_053163 94066 Mm.26775 NM_053163 ENSMUSG00000021607 Mrpl36 AI646041 mitochondrial ribosomal protein L36 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861 chr1 64808764 64809194 + 0.569352520859861 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -71229 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-5 chr12 111429018 111429428 + 0.569352520859861 NA intron (NM_001289487, intron 12 of 13) intron (NM_001289487, intron 12 of 13) 11778 NM_001289488 74190 Mm.248640 NM_028807 ENSMUSG00000021280 Exoc3l4 1200009I06Rik|1600013K19Rik exocyst complex component 3-like 4 protein-coding unique_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861 chr11 116622395 116623032 + 0.569352520859861 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 1539 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-8 chr2 103566586 103567004 + 0.569352520859861 NA exon (NM_178890, exon 1 of 17) exon (NM_178890, exon 1 of 17) 485 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-10 chr2 165760040 165760380 + 0.569352520859861 NA intron (NM_001271962, intron 10 of 15) intron (NM_001271962, intron 10 of 15) 97963 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861 chr1 132348126 132348563 + 0.569352520859861 NA Intergenic Intergenic 19604 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-5 chr2 59584244 59584559 + 0.569352520859861 NA Intergenic Intergenic -27641 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-5 chr2 164437787 164438149 + 0.569352520859861 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 5220 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-2 chr15 41710643 41710959 + 0.569352520859861 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -78194 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-6 chr6 99485373 99485737 + 0.569352520859861 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 35438 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-3 chr7 130978341 130978976 + 0.569352520859861 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 42455 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-7 chr9 44233684 44234034 + 0.569352520859861 NA exon (NM_007619, exon 1 of 16) exon (NM_007619, exon 1 of 16) 187 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-7 chr4 106628702 106629504 + 0.569352520859861 NA intron (NM_177667, intron 1 of 6) intron (NM_177667, intron 1 of 6) 6654 NM_177667 230576 Mm.41945 NM_177667 ENSMUSG00000034919 Ttc22 4732467L16Rik tetratricopeptide repeat domain 22 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-7 chr17 33289633 33290022 + 0.569352520859861 NA intron (NM_001142957, intron 1 of 3) intron (NM_001142957, intron 1 of 3) 283 NM_001142957 100043468 Mm.276296 NM_001142957 ENSMUSG00000096910 Zfp955b A430003O12Rik|C430039G02Rik|C530035A18Rik|Gm4455|Zfp883b zinc finger protein 955B protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-9 chr6 52237911 52238292 + 0.569352520859861 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 2753 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-3 chr11 106659955 106660317 + 0.569352520859861 NA intron (NM_001032378, intron 13 of 13) intron (NM_001032378, intron 13 of 13) -47206 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-8 chr4 52438433 52439169 + 0.569352520859861 NA promoter-TSS (NM_001301412) promoter-TSS (NM_001301412) 163 NR_045175 72648 Mm.391869 NR_045175 ENSMUSG00000085763 Smc2os 2700081L22Rik structural maintenance of chromosomes 2, opposite strand ncRNA common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-3 chr15 77847004 77847323 + 0.569352520859861 NA Intergenic Intergenic -4988 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-7 chr4 11917865 11918349 + 0.569352520859861 NA Intergenic Intergenic 47606 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-10 chr9 61669006 61669533 + 0.569352520859861 NA Intergenic ID_B1|SINE|B4 245241 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding unique_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-4 chr8 84023610 84024294 + 0.569352520859861 NA intron (NM_028877, intron 1 of 6) intron (NM_028877, intron 1 of 6) 2478 NM_028877 74337 Mm.250943 NM_028877 ENSMUSG00000047986 Palm3 4432412L15Rik|AL024300 paralemmin 3 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-2 chr13 81657803 81658129 + 0.569352520859861 NA intron (NM_030257, intron 1 of 2) CpG 160 NM_030257 80289 Mm.259969 NM_030257 ENSMUSG00000035840 Lysmd3 1110030H10Rik|BC003322 LysM, putative peptidoglycan-binding, domain containing 3 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-6 chr14 65837377 65837729 + 0.569352520859861 NA intron (NM_145944, intron 1 of 8) CpG 251 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-9 chr6 108213221 108213673 + 0.569352520859861 NA intron (NM_010585, intron 1 of 61) intron (NM_010585, intron 1 of 61) 351 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-4 chr17 24735810 24736256 + 0.569352520859861 NA promoter-TSS (NM_001346668) promoter-TSS (NM_001346668) -560 NM_013759 27361 Mm.28212 NM_013759 ENSMUSG00000075705 Msrb1 D17Wsu82e|SELX|SelR|Sepr|Sepx1 methionine sulfoxide reductase B1 protein-coding common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-11 chr4 116557191 116557527 + 0.569352520859861 NA promoter-TSS (NM_029868) promoter-TSS (NM_029868) -368 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding unique_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-2 chr18 23989239 23989790 + 0.569352520859861 NA promoter-TSS (NM_011755) promoter-TSS (NM_011755) -120 NM_011755 22694 Mm.290596 NM_011755 ENSMUSG00000063281 Zfp35 Zfp-35|Znf271|mszf13|mszf20-1|mszf28|mszf68 zinc finger protein 35 protein-coding common_peak1_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-5 chr4 56374013 56374274 + 0.569352520859861 NA Intergenic Intergenic 367282 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding unique_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-2 chr19 36918740 36919155 + 0.569352520859861 NA exon (NM_028263, exon 2 of 2) exon (NM_028263, exon 2 of 2) 652 NM_028263 72514 Mm.41674 NM_028263 ENSMUSG00000047632 Fgfbp3 2610306H15Rik|Fgf-bp3 fibroblast growth factor binding protein 3 protein-coding common_peak1_35_22_0.368149292615692_4.70763660236486_0.569352520859861-8 chr5 147292188 147292756 + 0.569352520859861 NA Intergenic Intergenic -9174 NR_105854 102465309 NR_105854 ENSMUSG00000098687 Mir7k Gm27814|Mirlet7k|mmu-let-7k microRNA 7k ncRNA common_peak2_35_22_0.368149292615692_4.70763660236486_0.569352520859861-4 chr11 117114714 117114954 + 0.569352520859861 NA promoter-TSS (NR_029459) promoter-TSS (NR_029459) -338 NR_029459 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak2_26_30_-0.474594479913472_4.71689907043014_0.569352520859861-4 chr2 13438406 13438849 + 0.569352520859861 NA intron (NM_001081084, intron 22 of 66) intron (NM_001081084, intron 22 of 66) 53249 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_75_75_-0.285819038471683_6.10501799420774_0.56930120447092 chr1 85894611 85896026 + 0.56930120447092 NA intron (NM_022417, intron 1 of 5) intron (NM_022417, intron 1 of 5) 808 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding common_peak2_74_75_-0.304793049063822_6.09553098891167_0.56930120447092 chr1 106408303 106409035 + 0.56930120447092 NA Intergenic Intergenic 137962 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_75_75_-0.285819038471683_6.10501799420774_0.56930120447092-3 chr5 33651693 33652605 + 0.56930120447092 NA intron (NM_001289725, intron 1 of 6) CpG-10980 425 NM_001289725 20492 Mm.4172 NM_009193 ENSMUSG00000004642 Slbp - stem-loop binding protein protein-coding common_peak2_75_75_-0.285819038471683_6.10501799420774_0.56930120447092-2 chr18 68157749 68158539 + 0.56930120447092 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -69802 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_91_62_0.258518398723094_6.10653912286146_0.569301204470908 chr7 102209261 102210047 + 0.569301204470908 NA promoter-TSS (NM_001291358) promoter-TSS (NM_001291358) 213 NM_001287167 269966 Mm.439800 NM_022979 ENSMUSG00000063550 Nup98 4732457F17|AI849286|Nup96 nucleoporin 98 protein-coding common_peak1_90_62_0.242862320956082_6.09871108397796_0.569301204470908-3 chr8 53511827 53512423 + 0.569301204470908 NA intron (NM_001005847, intron 1 of 8) intron (NM_001005847, intron 1 of 8) 423 NM_001005847 11593 Mm.334535 NM_001005847 ENSMUSG00000031521 Aga AW060726 aspartylglucosaminidase protein-coding common_peak2_90_62_0.242862320956082_6.09871108397796_0.569301204470908 chr3 98013649 98014207 + 0.569301204470908 NA intron (NM_010928, intron 1 of 33) CpG 390 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_90_62_0.242862320956082_6.09871108397796_0.569301204470908-2 chr11 108342759 108343642 + 0.569301204470908 NA intron (NM_011101, intron 1 of 16) CpG 688 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_90_62_0.242862320956082_6.09871108397796_0.569301204470908 chr10 83543585 83544672 + 0.569301204470908 NA intron (NM_001033375, intron 1 of 32) CpG 187 NM_001033375 319277 Mm.491194 NM_001033375 ENSMUSG00000034560 Washc4 A230046K03Rik|AA589518|Kiaa1033|mKIAA1033 WASH complex subunit 4 protein-coding common_peak1_186_172_-0.182716991494252_7.3432697318896_0.569283519555409 chr12 16894939 16896928 + 0.569283519555409 NA intron (NM_009072, intron 1 of 32) intron (NM_009072, intron 1 of 32) 955 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak2_248_226_-0.164444243745787_7.74432636541802_0.56892273196018 chr2 30441343 30443779 + 0.56892273196018 NA intron (NM_138748, intron 8 of 9) intron (NM_138748, intron 8 of 9) 26511 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak1_167_156_-0.196196012018735_7.19652274288226_0.568761005180089 chr17 80726170 80727914 + 0.568761005180089 NA intron (NM_001360278, intron 1 of 33) LFSINE_Vert|SINE|tRNA 983 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_191_137_0.181186250947349_7.19911758225184_0.568761005180089 chr4 124703428 124705257 + 0.568761005180089 NA intron (NM_010213, intron 1 of 5) intron (NM_010213, intron 1 of 5) 3643 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding common_peak1_136_96_0.206302731928652_6.70306420815145_0.568552332376537 chr1 43161748 43162991 + 0.568552332376537 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 1592 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_117_112_-0.227832856665753_6.70626253408231_0.568552332376537 chr2 172644212 172645768 + 0.568552332376537 NA Intergenic Intergenic 93999 NM_001159696 21420 Mm.3629 NM_009335 ENSMUSG00000028640 Tfap2c AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c transcription factor AP-2, gamma protein-coding common_peak2_102_99_-0.246268824716497_6.52072177741648_0.568314075859425-2 chr7 123109277 123110920 + 0.568314075859425 NA Intergenic Intergenic -13787 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak2_102_99_-0.246268824716497_6.52072177741648_0.568314075859425 chr10 23569848 23571010 + 0.568314075859425 NA Intergenic Intergenic 215022 NR_037680 100529074 Mm.371846 NR_037680 ENSMUSG00000070063 Snora33 ACA33|MBI-42 small nucleolar RNA, H/ACA box 33 snoRNA common_peak2_120_84_0.218919824838623_6.51885084855701_0.568314075859425 chr7 68020807 68021905 + 0.568314075859425 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 69099 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_132_126_-0.224917162226133_6.8762261056591_0.568308303182459 chr6 99521412 99522972 + 0.568308303182459 NA Intergenic CpG-12329 -1199 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_132_126_-0.224917162226133_6.8762261056591_0.568308303182459 chr10 60354676 60355693 + 0.568308303182459 NA intron (NM_028732, intron 1 of 6) intron (NM_028732, intron 1 of 6) 8333 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding common_peak1_153_109_0.192419759073285_6.8775695930613_0.568308303182459 chr7 65978277 65979568 + 0.568308303182459 NA intron (NM_011048, intron 11 of 21) intron (NM_011048, intron 11 of 21) -81414 NR_152094 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_187_173_-0.183392151693162_7.35124742000215_0.567635716347848 chr5 24840881 24842385 + 0.567635716347848 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 728 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_105_73_0.229261710067666_6.32408422066278_0.567375843566121 chr11 84068333 84069158 + 0.567375843566121 NA promoter-TSS (NM_019819) promoter-TSS (NM_019819) -388 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak2_52_55_-0.361584866787743_5.62656248866373_0.566980988816338 chr1 182021032 182022008 + 0.566980988816338 NA Intergenic Intergenic -1540 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak2_66_44_0.289699921310713_5.63670305698503_0.566980988816338 chr6 97311701 97312511 + 0.566980988816338 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -59326 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_66_44_0.289699921310713_5.63670305698503_0.566980988816338 chr10 58446188 58446665 + 0.566980988816338 NA promoter-TSS (NM_011240) promoter-TSS (NM_011240) -426 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak1_66_44_0.289699921310713_5.63670305698503_0.566980988816338-3 chr18 56707882 56708817 + 0.566980988816338 NA exon (NM_010721, exon 1 of 11) exon (NM_010721, exon 1 of 11) 536 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_52_55_-0.361584866787743_5.62656248866373_0.566980988816338 chr1 6358726 6359235 + 0.566980988816338 NA promoter-TSS (NM_001195732) promoter-TSS (NM_001195732) -351 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak1_52_55_-0.361584866787743_5.62656248866373_0.566980988816338-3 chr4 133814369 133815154 + 0.566980988816338 NA Intergenic Intergenic 59970 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_53_55_-0.334808071157444_5.63995088647888_0.566980988816338 chr10 82629807 82630282 + 0.566980988816338 NA intron (NM_001358517, intron 1 of 9) CpG 202 NR_037190 624784 Mm.284252 NR_037190 Gm9855 - thymine DNA glycosylase pseudogene pseudo common_peak1_66_44_0.289699921310713_5.63670305698503_0.566980988816338-4 chr8 54550010 54550775 + 0.566980988816338 NA promoter-TSS (NM_029569) promoter-TSS (NM_029569) 61 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak2_53_55_-0.334808071157444_5.63995088647888_0.566980988816338-2 chr11 71003763 71004420 + 0.566980988816338 NA intron (NM_178367, intron 1 of 11) CpG 341 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding common_peak1_52_55_-0.361584866787743_5.62656248866373_0.566980988816338-4 chr7 142094433 142095220 + 0.566980988816338 NA intron (NM_008748, intron 1 of 6) CpG 458 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak2_53_55_-0.334808071157444_5.63995088647888_0.566980988816338-4 chr8 70657420 70658245 + 0.566980988816338 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 1906 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_52_55_-0.361584866787743_5.62656248866373_0.566980988816338-2 chr17 66843404 66844205 + 0.566980988816338 NA intron (NM_001357625, intron 15 of 32) intron (NM_001357625, intron 15 of 32) 129348 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA common_peak1_66_44_0.289699921310713_5.63670305698503_0.566980988816338-2 chr13 63244345 63245470 + 0.566980988816338 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 4878 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_53_55_-0.334808071157444_5.63995088647888_0.566980988816338-3 chr2 26909787 26910621 + 0.566980988816338 NA promoter-TSS (NM_013721) promoter-TSS (NM_013721) 438 NM_011513 20933 Mm.397932 NM_011513 ENSMUSG00000015776 Med22 AW212655|AW558812|Surf-5|Surf5 mediator complex subunit 22 protein-coding common_peak2_168_157_-0.19685440263116_7.20535354686152_0.566943354600629 chr1 75399260 75400887 + 0.566943354600629 NA promoter-TSS (NM_001173477) promoter-TSS (NM_001173477) -12 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak2_168_157_-0.19685440263116_7.20535354686152_0.566943354600629-2 chr12 102282577 102284127 + 0.566943354600629 NA promoter-TSS (NM_001161365) promoter-TSS (NM_001161365) 278 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_55_36_0.31519074858973_5.36704873992382_0.566504029620424 chr10 11280739 11281195 + 0.566504029620424 NA promoter-TSS (NM_027968) promoter-TSS (NM_027968) -363 NM_027968 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding common_peak2_55_36_0.31519074858973_5.36704873992382_0.566504029620424 chr12 84192340 84192839 + 0.566504029620424 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 1426 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_55_36_0.31519074858973_5.36704873992382_0.566504029620424-2 chr7 4137556 4138199 + 0.566504029620424 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 821 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding common_peak2_43_46_-0.375413449080577_5.36688212713735_0.566504029620424 chr15 64472222 64472793 + 0.566504029620424 NA Intergenic Intergenic -89588 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_43_46_-0.375413449080577_5.36688212713735_0.566504029620424-3 chr2 151962698 151963410 + 0.566504029620424 NA Intergenic Intergenic 4563 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak1_43_46_-0.375413449080577_5.36688212713735_0.566504029620424-3 chr4 141148069 141148609 + 0.566504029620424 NA intron (NM_172518, intron 1 of 9) CpG 417 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding common_peak1_43_46_-0.375413449080577_5.36688212713735_0.566504029620424 chr2 148197267 148197583 + 0.566504029620424 NA Intergenic Intergenic -150456 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak1_55_36_0.31519074858973_5.36704873992382_0.566504029620424-3 chr8 31187454 31187924 + 0.566504029620424 NA intron (NM_001286425, intron 1 of 3) intron (NM_001286425, intron 1 of 3) 358 NM_001286425 171167 Mm.334477 NM_134161 ENSMUSG00000046152 Fut10 fuc-TX|fut10A fucosyltransferase 10 protein-coding common_peak1_43_46_-0.375413449080577_5.36688212713735_0.566504029620424-2 chr2 172643354 172643838 + 0.566504029620424 NA Intergenic Intergenic 92605 NM_001159696 21420 Mm.3629 NM_009335 ENSMUSG00000028640 Tfap2c AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c transcription factor AP-2, gamma protein-coding common_peak1_43_46_-0.375413449080577_5.36688212713735_0.566504029620424-5 chr9 73906397 73906815 + 0.566504029620424 NA intron (NM_001081153, intron 1 of 30) intron (NM_001081153, intron 1 of 30) 26961 NM_001081153 208898 Mm.41035 NM_001081153 ENSMUSG00000062151 Unc13c 1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3 unc-13 homolog C (C. elegans) protein-coding common_peak2_55_36_0.31519074858973_5.36704873992382_0.566504029620424-2 chr6 129532983 129533712 + 0.566504029620424 NA promoter-TSS (NR_045270) promoter-TSS (NR_045270) -63 NR_045270 100504641 Mm.398286 NR_045270 ENSMUSG00000097675 1700101I11Rik - RIKEN cDNA 1700101I11 gene ncRNA common_peak1_43_46_-0.375413449080577_5.36688212713735_0.566504029620424-4 chr6 71440953 71441498 + 0.566504029620424 NA promoter-TSS (NM_024288) promoter-TSS (NM_024288) -588 NM_024288 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding common_peak2_55_36_0.31519074858973_5.36704873992382_0.566504029620424-3 chr6 146898415 146898914 + 0.566504029620424 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 10170 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_43_46_-0.375413449080577_5.36688212713735_0.566504029620424-2 chr15 83443834 83444489 + 0.566504029620424 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 3719 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_78_53_0.262680164111808_5.88622758421937_0.566481892518367 chr18 36512968 36513856 + 0.566481892518367 NA intron (NM_010415, intron 2 of 5) intron (NM_010415, intron 2 of 5) 2393 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak2_63_65_-0.328464034287146_5.88016210221488_0.566481892518367-3 chr7 137437650 137438408 + 0.566481892518367 NA intron (NR_033611, intron 1 of 10) CpG 355 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 - glutaredoxin 3 pseudogene pseudo common_peak2_64_65_-0.306254025722706_5.8912671064971_0.566481892518367-2 chr6 56714899 56715756 + 0.566481892518367 NA intron (NM_030235, intron 1 of 15) CpG 422 NM_030235 78937 Mm.105343 NM_030235 ENSMUSG00000029787 Avl9 5830411G16Rik|D730049P16Rik|mKIAA0241 AVL9 cell migration associated protein-coding common_peak2_78_53_0.262680164111808_5.88622758421937_0.566481892518367 chr11 75178109 75178760 + 0.566481892518367 NA intron (NM_144491, intron 12 of 12) intron (NM_144491, intron 12 of 12) 374 NM_027136 246257 Mm.41496 NM_027136 ENSMUSG00000038268 Ovca2 9030414M07Rik candidate tumor suppressor in ovarian cancer 2 protein-coding common_peak2_63_65_-0.328464034287146_5.88016210221488_0.566481892518367-2 chr5 134176153 134176771 + 0.566481892518367 NA exon (NM_033572, exon 1 of 11) exon (NM_033572, exon 1 of 11) 305 NM_033572 94254 Mm.29508 NM_033572 ENSMUSG00000061979 Rcc1l 5730496C04Rik|AU019812|Wbscr16 reculator of chromosome condensation 1 like protein-coding common_peak2_63_65_-0.328464034287146_5.88016210221488_0.566481892518367 chr16 5049180 5049835 + 0.566481892518367 NA promoter-TSS (NM_001356320) promoter-TSS (NM_001356320) 403 NM_001359747 74022 Mm.21652 NM_028720 ENSMUSG00000022536 Glyr1 2810419J22Rik|3930401K13Rik|AW545332|Npac glyoxylate reductase 1 homolog (Arabidopsis) protein-coding common_peak2_64_65_-0.306254025722706_5.8912671064971_0.566481892518367 chr15 76242681 76243401 + 0.566481892518367 NA intron (NM_001163576, intron 1 of 9) intron (NM_001163576, intron 1 of 9) 399 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding common_peak1_78_53_0.262680164111808_5.88622758421937_0.566481892518367-2 chr8 119344551 119345035 + 0.566481892518367 NA intron (NM_024219, intron 1 of 3) intron (NM_024219, intron 1 of 3) 255 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 protein-coding common_peak2_64_65_-0.306254025722706_5.8912671064971_0.566481892518367-3 chr8 77493966 77495113 + 0.566481892518367 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -22517 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_64_65_-0.306254025722706_5.8912671064971_0.566481892518367 chr2 30258996 30259560 + 0.566481892518367 NA intron (NM_177725, intron 3 of 3) intron (NM_177725, intron 3 of 3) -6925 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak1_155_110_0.197847951185974_6.89333984194309_0.566048892444129 chr16 36875186 36877011 + 0.566048892444129 NA Intergenic Intergenic -1272 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak2_134_127_-0.214851229919206_6.8925743850404_0.566048892444129 chr4 40721865 40723320 + 0.566048892444129 NA promoter-TSS (NR_029594) promoter-TSS (NR_029594) 124 NM_008298 15502 Mm.27897 NM_008298 ENSMUSG00000028410 Dnaja1 HSJ-2|Hsj2|Nedd7 DnaJ heat shock protein family (Hsp40) member A1 protein-coding common_peak1_155_110_0.197847951185974_6.89333984194309_0.566048892444129-2 chr16 92549994 92551987 + 0.566048892444129 NA Intergenic Intergenic 52843 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak2_118_113_-0.228455086827403_6.71866247075104_0.565999528429208-3 chr6 31108322 31109454 + 0.565999528429208 NA intron (NR_110471, intron 3 of 3) PB1D9|SINE|Alu -45795 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_118_113_-0.228455086827403_6.71866247075104_0.565999528429208 chr10 24592689 24593996 + 0.565999528429208 NA Intergenic Intergenic -2100 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_118_113_-0.228455086827403_6.71866247075104_0.565999528429208-2 chr10 111009288 111010486 + 0.565999528429208 NA intron (NM_001359624, intron 1 of 16) CpG 122 NM_001359622 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|DHHC-17|Hip14 zinc finger, DHHC domain containing 17 protein-coding common_peak2_151_142_-0.204817841379731_7.05746241608852_0.565727360930377 chr13 34343677 34345171 + 0.565727360930377 NA exon (NM_001033167, exon 1 of 11) exon (NM_001033167, exon 1 of 11) 758 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_76_76_-0.285952088523712_6.12381049643304_0.565429786553928 chr16 70313795 70314822 + 0.565429786553928 NA intron (NM_028803, intron 1 of 15) CpG 359 NM_028803 74185 Mm.396102 NM_028803 ENSMUSG00000022707 Gbe1 2310045H19Rik|2810426P10Rik|D16Ertd536e glucan (1,4-alpha-), branching enzyme 1 protein-coding common_peak2_76_76_-0.285952088523712_6.12381049643304_0.565429786553928 chr8 70477241 70478243 + 0.565429786553928 NA promoter-TSS (NM_001122830) promoter-TSS (NM_001122830) -799 NM_178771 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_92_63_0.251285141780237_6.12564257089012_0.565429786553928 chr1 62702837 62704330 + 0.565429786553928 NA 5' UTR (NM_010939, exon 1 of 16) 5' UTR (NM_010939, exon 1 of 16) 266 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_92_63_0.251285141780237_6.12564257089012_0.565429786553928-2 chr8 104534011 104534601 + 0.565429786553928 NA promoter-TSS (NM_001301164) promoter-TSS (NM_001301164) 331 NM_144931 234664 Mm.237670 NM_144931 ENSMUSG00000031878 Nae1 59kDa|Appbp1 NEDD8 activating enzyme E1 subunit 1 protein-coding common_peak1_76_76_-0.285952088523712_6.12381049643304_0.565429786553928-2 chr8 121187239 121187784 + 0.565429786553928 NA Intergenic Intergenic 59826 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_121_85_0.213836335027534_6.53318292221586_0.565418124657885 chr7 28951795 28952567 + 0.565418124657885 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 10151 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_121_85_0.213836335027534_6.53318292221586_0.565418124657885 chr11 20631500 20632933 + 0.565418124657885 NA 5' UTR (NM_001038625, exon 1 of 2) 5' UTR (NM_001038625, exon 1 of 2) 239 NM_001038625 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak2_103_100_-0.24678326744317_6.53481984903021_0.56541812465786 chr7 44815928 44817243 + 0.56541812465786 NA promoter-TSS (NM_030693) promoter-TSS (NM_030693) 73 NR_033136 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding common_peak1_230_210_-0.166484113881786_7.63785713176629_0.565233140295647 chr8 86745244 86747062 + 0.565233140295647 NA promoter-TSS (NM_009172) promoter-TSS (NM_009172) -147 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak1_169_158_-0.197505158340514_7.2141303761141_0.56515023477229 chr19 45782484 45783578 + 0.56515023477229 NA non-coding (NR_151594, exon 1 of 15) non-coding (NR_151594, exon 1 of 15) 522 NR_151594 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 Hy5|Ncoat|OGA meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877 chr1 71886971 71887786 + 0.564346534703877 NA promoter-TSS (NR_027658) promoter-TSS (NR_027658) -734 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-4 chr4 107434644 107435182 + 0.564346534703877 NA intron (NM_147221, intron 1 of 10) CpG 194 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_45_29_0.335962706187736_5.07487194870239_0.564346534703877-2 chr15 7597589 7598121 + 0.564346534703877 NA Intergenic Intergenic -199460 NM_001289498 268780 Mm.203208 NM_178748 ENSMUSG00000042961 Egflam 5930412K08|AU040377 EGF-like, fibronectin type III and laminin G domains protein-coding common_peak1_34_38_-0.434046226316445_5.06837910570403_0.564346534703877 chr10 71126866 71127384 + 0.564346534703877 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 32565 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877-5 chr4 54980120 54980743 + 0.564346534703877 NA intron (NM_172867, intron 1 of 12) X7B_LINE|LINE|CR1 32486 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877-2 chr8 122233821 122234524 + 0.564346534703877 NA Intergenic Intergenic -47969 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877-4 chr3 96629954 96630412 + 0.564346534703877 NA promoter-TSS (NR_003619) promoter-TSS (NR_003619) 255 NM_001102407 60365 Mm.261972 NM_025875 ENSMUSG00000038374 Rbm8a 2310057C03Rik|AA673428|Rbm8 RNA binding motif protein 8a protein-coding common_peak2_45_29_0.335962706187736_5.07487194870239_0.564346534703877-3 chr18 60625158 60625683 + 0.564346534703877 NA Intergenic Intergenic -1115 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877-2 chr17 87169605 87170232 + 0.564346534703877 NA Intergenic URR1A|DNA|hAT-Charlie 25024 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA common_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877-3 chr3 36475972 36476441 + 0.564346534703877 NA promoter-TSS (NR_105976) promoter-TSS (NR_105976) 269 NM_028183 72282 Mm.55317 NM_028183 ENSMUSG00000027713 1810062G17Rik - RIKEN cDNA 1810062G17 gene protein-coding common_peak2_45_29_0.335962706187736_5.07487194870239_0.564346534703877-4 chr2 61401833 61402347 + 0.564346534703877 NA Intergenic Intergenic -176496 NM_011529 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak1_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-4 chr5 34168852 34169404 + 0.564346534703877 NA intron (NM_146159, intron 1 of 4) intron (NM_146159, intron 1 of 4) 296 NM_146159 231123 Mm.319286 NM_146159 ENSMUSG00000079555 Haus3 D4S43h|D5H4S43|D5H4S43E HAUS augmin-like complex, subunit 3 protein-coding common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-7 chr9 14784131 14784469 + 0.564346534703877 NA promoter-TSS (NM_001310728) promoter-TSS (NM_001310728) 273 NM_019683 56503 Mm.272618 NM_019683 ENSMUSG00000031931 Ankrd49 AW060934|C86108|Gbif ankyrin repeat domain 49 protein-coding common_peak2_45_29_0.335962706187736_5.07487194870239_0.564346534703877-5 chr7 105621490 105621816 + 0.564346534703877 NA intron (NM_001360425, intron 2 of 11) intron (NM_001360425, intron 2 of 11) 11918 NM_018880 55992 Mm.29290 NM_018880 ENSMUSG00000036989 Trim3 BERP1|HAC1|Rnf22 tripartite motif-containing 3 protein-coding common_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877-6 chr4 111720035 111720743 + 0.564346534703877 NA intron (NM_026470, intron 1 of 12) intron (NM_026470, intron 1 of 12) 379 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding common_peak2_45_29_0.335962706187736_5.07487194870239_0.564346534703877 chr12 86872609 86872933 + 0.564346534703877 NA Intergenic Intergenic 12043 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-2 chr13 42351916 42352431 + 0.564346534703877 NA Intergenic Intergenic 50697 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-3 chr5 15934571 15935255 + 0.564346534703877 NA 5' UTR (NM_001110844, exon 1 of 39) 5' UTR (NM_001110844, exon 1 of 39) 222 NM_001110844 12293 Mm.159842 NM_009784 ENSMUSG00000040118 Cacna2d1 Ca(v)alpha2delta1|Cacna2|Cchl2a calcium channel, voltage-dependent, alpha2/delta subunit 1 protein-coding common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-2 chr1 88875106 88875547 + 0.564346534703877 NA Intergenic Intergenic 120436 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA unique_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877 chr4 130273899 130274644 + 0.564346534703877 NA intron (NM_172702, intron 1 of 9) intron (NM_172702, intron 1 of 9) 949 NM_001253386 230779 Mm.45132 NM_172702 ENSMUSG00000023232 Serinc2 2310004K20Rik|AW121759|FKSG84|TDE2|Tde2l serine incorporator 2 protein-coding common_peak2_45_29_0.335962706187736_5.07487194870239_0.564346534703877-6 chr8 70630063 70630533 + 0.564346534703877 NA intron (NM_011819, intron 1 of 1) B1_Mur4|SINE|Alu 1797 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-5 chr7 39552104 39552691 + 0.564346534703877 NA Intergenic Intergenic 34631 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-3 chr11 23497287 23497926 + 0.564346534703877 NA intron (NM_172391, intron 1 of 8) CpG 433 NM_001290655 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding common_peak2_34_38_-0.434046226316445_5.06837910570403_0.564346534703877-6 chr8 36165241 36165559 + 0.564346534703877 NA Intergenic Intergenic 9390 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA unique_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877 chr8 24420955 24421363 + 0.564346534703877 NA Intergenic Intergenic 17787 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_45_29_0.335962706187736_5.07487194870239_0.564346534703877 chr11 95310496 95310948 + 0.564346534703877 NA promoter-TSS (NM_001195004) promoter-TSS (NM_001195004) 306 NR_155298 102640811 Mm.440938 NR_155298 Gm11520 - predicted gene 11520 ncRNA common_peak1_106_74_0.223347346533278_6.34049236376252_0.564079346629873-2 chr8 117334481 117335035 + 0.564079346629873 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -14412 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_107_74_0.236673180831034_6.3471552809114_0.564079346629873 chr6 88927953 88929292 + 0.564079346629873 NA Intergenic Intergenic 26371 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_106_74_0.223347346533278_6.34049236376252_0.564079346629873-2 chr8 70283137 70283830 + 0.564079346629873 NA intron (NM_001146153, intron 1 of 9) CpG 484 NM_001146153 26558 Mm.388127 NM_011984 ENSMUSG00000003573 Homer3 AW146114 homer scaffolding protein 3 protein-coding common_peak1_106_74_0.223347346533278_6.34049236376252_0.564079346629873 chr1 161875537 161876625 + 0.564079346629873 NA intron (NR_151684, intron 1 of 24) intron (NR_151684, intron 1 of 24) 601 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding common_peak2_107_74_0.236673180831034_6.3471552809114_0.564079346629873 chr3 144569119 144570189 + 0.564079346629873 NA promoter-TSS (NM_053102) promoter-TSS (NM_053102) 562 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak2_106_74_0.223347346533278_6.34049236376252_0.564079346629873 chr11 5955336 5956239 + 0.564079346629873 NA promoter-TSS (NM_019661) promoter-TSS (NM_019661) 29 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak1_89_88_-0.271420263113058_6.34002329940987_0.564079346629873 chr9 70542223 70543441 + 0.564079346629873 NA non-coding (NR_152142, exon 1 of 20) non-coding (NR_152142, exon 1 of 20) 117 NM_025690 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding common_peak2_135_128_-0.21550635723329_6.90347407680661_0.563827392996637 chr2 18063736 18065637 + 0.563827392996637 NA non-coding (NR_045539, exon 1 of 25) non-coding (NR_045539, exon 1 of 25) 101 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak1_174_125_0.179623008653278_7.06709142782656_0.563749017406449 chr5 125139863 125141714 + 0.563749017406449 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 38426 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_119_114_-0.229067464891734_6.73095631849851_0.563495029755077 chr2 5844605 5846035 + 0.563495029755077 NA promoter-TSS (NM_001356501) promoter-TSS (NM_001356501) -143 NM_001356501 98828 Mm.181490 NM_133837 ENSMUSG00000039128 Cdc123 AA959893|G431001I09Rik cell division cycle 123 protein-coding common_peak1_171_159_-0.189795523824419_7.22703033297515_0.56338115209489 chr5 146691388 146693347 + 0.56338115209489 NA Intergenic Intergenic 102589 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-6 chr11 62086995 62087303 + 0.563372268424553 NA intron (NM_001029936, intron 1 of 12) intron (NM_001029936, intron 1 of 12) 10125 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553-2 chr17 32506837 32507149 + 0.563372268424553 NA exon (NM_001101445, exon 2 of 13) exon (NM_001101445, exon 2 of 13) 531 NM_001101445 208285 Mm.311422 NM_001101445 ENSMUSG00000091586 Cyp4f17 EG208285 cytochrome P450, family 4, subfamily f, polypeptide 17 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-24 chr7 63816053 63816415 + 0.563372268424553 NA Intergenic Intergenic -100623 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-23 chr6 39242988 39243429 + 0.563372268424553 NA Intergenic Intergenic -36435 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-4 chr11 55405278 55405629 + 0.563372268424553 NA intron (NM_009242, intron 4 of 9) intron (NM_009242, intron 4 of 9) 14627 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-12 chr2 38541185 38541718 + 0.563372268424553 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 29575 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-11 chr15 78468552 78468761 + 0.563372268424553 NA promoter-TSS (NM_027902) promoter-TSS (NM_027902) -22 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-11 chr17 74717959 74718202 + 0.563372268424553 NA intron (NM_152817, intron 1 of 19) intron (NM_152817, intron 1 of 19) 330 NM_152817 74196 Mm.209503 NM_152817 ENSMUSG00000024078 Ttc27 2610511O17Rik tetratricopeptide repeat domain 27 protein-coding common_peak1_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-4 chr8 70880773 70880962 + 0.563372268424553 NA Intergenic Intergenic -7377 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-2 chr1 88560538 88560813 + 0.563372268424553 NA non-coding (NR_037971, exon 6 of 6) non-coding (NR_037971, exon 6 of 6) 9158 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-19 chr4 117883112 117883359 + 0.563372268424553 NA non-coding (NR_045570, exon 1 of 9) non-coding (NR_045570, exon 1 of 9) 241 NR_045570 53418 Mm.123843 NM_017377 ENSMUSG00000028541 B4galt2 Ggtb2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553 chr1 40414088 40414436 + 0.563372268424553 NA Intergenic Intergenic -15308 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-22 chr6 81585805 81586311 + 0.563372268424553 NA Intergenic Intergenic 309605 NR_106091 102465711 NR_106091 ENSMUSG00000106154 Mir7232 mmu-mir-7232 microRNA 7232 ncRNA unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-21 chrX 8132034 8132376 + 0.563372268424553 NA intron (NM_028542, intron 1 of 8) intron (NM_028542, intron 1 of 8) 653 NM_001290783 73447 Mm.284162 NM_026137 ENSMUSG00000031166 Wdr13 1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21 WD repeat domain 13 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-13 chr3 101601829 101602043 + 0.563372268424553 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 2771 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-8 chr13 32496809 32497145 + 0.563372268424553 NA Intergenic Intergenic -158433 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553-3 chr3 101513260 101513521 + 0.563372268424553 NA Intergenic Intergenic 91317 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-16 chr18 76929359 76929710 + 0.563372268424553 NA promoter-TSS (NM_025409) promoter-TSS (NM_025409) -493 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-27 chr8 124653070 124653402 + 0.563372268424553 NA intron (NM_175149, intron 1 of 3) intron (NM_175149, intron 1 of 3) 10133 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-16 chr19 38621480 38621798 + 0.563372268424553 NA intron (NM_019588, intron 2 of 31) intron (NM_019588, intron 2 of 31) 97442 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-5 chr10 39519190 39519508 + 0.563372268424553 NA intron (NM_001122893, intron 5 of 13) intron (NM_001122893, intron 5 of 13) -93585 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-3 chr1 91094071 91094351 + 0.563372268424553 NA intron (NM_008515, intron 10 of 22) intron (NM_008515, intron 10 of 22) 40767 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-10 chr15 36716344 36716581 + 0.563372268424553 NA Intergenic Intergenic 74470 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-16 chr3 65135463 65135815 + 0.563372268424553 NA non-coding (NR_126080, exon 4 of 5) non-coding (NR_126080, exon 4 of 5) 26625 NM_010597 16497 Mm.316402 NM_010597 ENSMUSG00000027827 Kcnab1 Akr8a8|Kvbeta1.1|mKv(beta)1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-13 chr2 62725433 62725748 + 0.563372268424553 NA intron (NM_133207, intron 12 of 15) intron (NM_133207, intron 12 of 15) 61263 NM_145523 227960 Mm.219877 NM_145523 ENSMUSG00000026893 Gca 5133401E04Rik|AI573844 grancalcin protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-11 chr15 41399934 41400162 + 0.563372268424553 NA Intergenic Intergenic -47434 NR_152565 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-9 chr2 24962700 24963165 + 0.563372268424553 NA intron (NM_001355557, intron 1 of 7) intron (NM_001355557, intron 1 of 7) 510 NM_026044 67228 Mm.389248 NM_026044 ENSMUSG00000026975 Dph7 2810443J12Rik|AW060693|Wdr85 diphthamine biosynethesis 7 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-6 chr16 31918129 31918452 + 0.563372268424553 NA Intergenic Intergenic -15561 NM_172822 239827 Mm.440388 NM_172822 ENSMUSG00000045625 Pigz F630022B06Rik phosphatidylinositol glycan anchor biosynthesis, class Z protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-11 chr2 167781301 167781821 + 0.563372268424553 NA Intergenic Intergenic 90384 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-19 chr2 119872893 119873268 + 0.563372268424553 NA Intergenic CpG -24148 NM_001164274 29808 Mm.87532 NM_013720 ENSMUSG00000033943 Mga AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5 MAX gene associated protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553 chr1 30903340 30903558 + 0.563372268424553 NA Intergenic Intergenic -40193 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553-4 chr6 91653807 91654066 + 0.563372268424553 NA Intergenic Intergenic -30131 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-19 chr8 70753623 70753833 + 0.563372268424553 NA promoter-TSS (NM_009001) promoter-TSS (NM_009001) -951 NM_001328047 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-2 chr1 132266739 132266974 + 0.563372268424553 NA Intergenic Intergenic -31770 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-14 chr3 58690742 58691098 + 0.563372268424553 NA intron (NM_009174, intron 1 of 1) intron (NM_009174, intron 1 of 1) 1468 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-14 chr17 80207552 80207801 + 0.563372268424553 NA promoter-TSS (NR_036615) promoter-TSS (NR_036615) -371 NM_001195485 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-10 chr15 64361382 64361728 + 0.563372268424553 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 21364 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-14 chr2 125471007 125471401 + 0.563372268424553 NA intron (NM_007993, intron 4 of 65) intron (NM_007993, intron 4 of 65) 35234 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553 chr1 58584998 58585387 + 0.563372268424553 NA intron (NM_001310598, intron 1 of 12) intron (NM_001310598, intron 1 of 12) 962 NM_001310599 213056 Mm.26272 NM_172513 ENSMUSG00000038174 Fam126b C130065N10Rik|D1Ertd53e|D630010C10 family with sequence similarity 126, member B protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-25 chr7 82423083 82423449 + 0.563372268424553 NA intron (NM_001190374, intron 3 of 29) intron (NM_001190374, intron 3 of 29) 87572 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-3 chr14 43277420 43277777 + 0.563372268424553 NA Intergenic Intergenic 70213 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-18 chr19 47331078 47331308 + 0.563372268424553 NA intron (NM_008018, intron 6 of 14) intron (NM_008018, intron 6 of 14) -57604 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-10 chr13 51128046 51128376 + 0.563372268424553 NA intron (NM_146043, intron 3 of 5) intron (NM_146043, intron 3 of 5) -6107 NM_011462 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-22 chr4 9074149 9074435 + 0.563372268424553 NA Intergenic Intergenic -195001 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-19 chr2 26352277 26352536 + 0.563372268424553 NA promoter-TSS (NM_001139504) promoter-TSS (NM_001139504) -296 NM_001139504 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-6 chr11 102297306 102297511 + 0.563372268424553 NA promoter-TSS (NM_001098837) promoter-TSS (NM_001098837) -779 NM_001098837 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-13 chr17 45241244 45241485 + 0.563372268424553 NA Intergenic Intergenic 192343 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-3 chr1 153564875 153565176 + 0.563372268424553 NA Intergenic Intergenic -15311 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-22 chr5 105802823 105803127 + 0.563372268424553 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -73593 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-3 chr12 80184538 80184741 + 0.563372268424553 NA intron (NM_134156, intron 9 of 20) intron (NM_134156, intron 9 of 20) -51795 NR_033514 69548 Mm.269712 NR_033514 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-13 chr3 57509084 57509457 + 0.563372268424553 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 66606 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-13 chr17 32829853 32830134 + 0.563372268424553 NA intron (NM_001360479, intron 1 of 3) intron (NM_001360479, intron 1 of 3) 268 NM_001293229 240064 Mm.476307 NM_177359 ENSMUSG00000095253 Zfp799 6030490I01Rik zinc finger protein 799 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-7 chr17 83351574 83351970 + 0.563372268424553 NA intron (NM_001357886, intron 1 of 21) intron (NM_001357886, intron 1 of 21) 841 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-25 chr8 83662532 83662949 + 0.563372268424553 NA intron (NM_018771, intron 4 of 6) intron (NM_018771, intron 4 of 6) -3904 NM_013641 19216 Mm.213000 NM_013641 ENSMUSG00000019464 Ptger1 EP1|Ptgerep1 prostaglandin E receptor 1 (subtype EP1) protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-3 chr11 44013500 44013808 + 0.563372268424553 NA Intergenic Intergenic -112417 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-16 chr6 98958866 98959195 + 0.563372268424553 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 69268 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-18 chr2 103073180 103073496 + 0.563372268424553 NA promoter-TSS (NM_019735) promoter-TSS (NM_019735) 175 NM_175094 27402 Mm.315011 NM_175094 ENSMUSG00000010914 Pdhx AI481367|E3bp|Pdx1 pyruvate dehydrogenase complex, component X protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-8 chr19 9977086 9977435 + 0.563372268424553 NA Intergenic Intergenic -3340 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-12 chr16 8851697 8852094 + 0.563372268424553 NA intron (NM_001081400, intron 3 of 3) intron (NM_001081400, intron 3 of 3) 21795 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-17 chr8 10970555 10970806 + 0.563372268424553 NA Intergenic Intergenic -37170 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-20 chr4 129017246 129017586 + 0.563372268424553 NA Intergenic Intergenic 24192 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553-6 chr7 139273873 139274075 + 0.563372268424553 NA Intergenic Intergenic 25492 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553 chr1 64943743 64944005 + 0.563372268424553 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 12950 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-2 chr11 96294279 96294557 + 0.563372268424553 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -4656 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding unique_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553-2 chr3 137864068 137864354 + 0.563372268424553 NA promoter-TSS (NM_001316995) promoter-TSS (NM_001316995) -276 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-9 chr14 121822899 121823499 + 0.563372268424553 NA Intergenic Intergenic -25465 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-5 chr11 78163503 78163783 + 0.563372268424553 NA intron (NM_009423, intron 1 of 6) intron (NM_009423, intron 1 of 6) 1907 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-19 chr8 120588530 120588941 + 0.563372268424553 NA exon (NM_178856, exon 2 of 5) exon (NM_178856, exon 2 of 5) 340 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-28 chr9 56152489 56152923 + 0.563372268424553 NA intron (NM_019793, intron 1 of 6) intron (NM_019793, intron 1 of 6) 8364 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-17 chr19 32321396 32321751 + 0.563372268424553 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 27743 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-2 chr6 113327298 113327495 + 0.563372268424553 NA intron (NM_010957, intron 1 of 6) intron (NM_010957, intron 1 of 6) 420 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-4 chr1 132193069 132193548 + 0.563372268424553 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) 1872 NM_001033250 213409 Mm.426321 NM_001033250 ENSMUSG00000079330 Lemd1 4930540I23Rik|6430514M23Rik|AI428128|LEMP-1 LEM domain containing 1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-8 chr15 80050078 80050471 + 0.563372268424553 NA Intergenic Intergenic 28305 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-21 chr9 119323171 119323377 + 0.563372268424553 NA promoter-TSS (NR_045693) promoter-TSS (NR_045693) -847 NM_133985 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding unique_peak1_14_18_-0.610339988671212_3.94275751910798_0.563372268424553 chr12 102730261 102730450 + 0.563372268424553 NA Intergenic Intergenic 13306 NM_001142937 64113 Mm.291222 NM_022323 ENSMUSG00000096458 Moap1 AA987038|Map-1|Pnma4 modulator of apoptosis 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553 chr1 36030151 36030423 + 0.563372268424553 NA Intergenic Intergenic -38113 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak1_13_18_-0.709173440078416_3.89334079340438_0.563372268424553 chr17 75471001 75471263 + 0.563372268424553 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 5594 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-7 chr12 84784692 84785115 + 0.563372268424553 NA exon (NM_013589, exon 34 of 35) exon (NM_013589, exon 34 of 35) 11633 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-15 chr2 167831714 167832000 + 0.563372268424553 NA Intergenic Intergenic -100470 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553 chr14 99624352 99624573 + 0.563372268424553 NA Intergenic Intergenic 325771 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-16 chr7 19333173 19333501 + 0.563372268424553 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -11734 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-17 chr19 55702490 55702826 + 0.563372268424553 NA promoter-TSS (NR_045318) promoter-TSS (NR_045318) -454 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-5 chr13 111346181 111346411 + 0.563372268424553 NA Intergenic Intergenic 91283 NM_175497 238880 Mm.107293 NM_175497 ENSMUSG00000055194 Actbl2 4732495G21Rik actin, beta-like 2 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-12 chr4 80940171 80940472 + 0.563372268424553 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 29635 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-4 chr11 96348476 96348775 + 0.563372268424553 NA TTS (NM_010458) TTS (NM_010458) -3007 NM_134032 103889 Mm.281153 NM_134032 ENSMUSG00000075588 Hoxb2 AI894218|Hox-2.8|Hoxbes2 homeobox B2 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-20 chr2 94407175 94407393 + 0.563372268424553 NA promoter-TSS (NM_001355691) promoter-TSS (NM_001355691) 577 NR_027831 66457 Mm.402557 NR_027831 2810002D19Rik - RIKEN cDNA 2810002D19 gene ncRNA unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-2 chr10 60812466 60812786 + 0.563372268424553 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 18955 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-20 chr4 119195424 119195813 + 0.563372268424553 NA promoter-TSS (NM_001038998) promoter-TSS (NM_001038998) 93 NM_001038998 69216 Mm.36697 NM_024462 ENSMUSG00000028643 Svbp 2410005K17Rik|AI851162|Ccdc23 small vasohibin binding protein protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-9 chr2 150454126 150454570 + 0.563372268424553 NA Intergenic Intergenic -2847 NM_001310645 668923 Mm.393876 NM_001177550 ENSMUSG00000068130 Zfp442 ZIPO-II zinc finger protein 442 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-7 chr15 25639061 25639307 + 0.563372268424553 NA intron (NM_019472, intron 1 of 40) intron (NM_019472, intron 1 of 40) 16634 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-3 chr7 37851214 37851493 + 0.563372268424553 NA Intergenic Intergenic -81601 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-5 chr16 37675892 37676263 + 0.563372268424553 NA Intergenic Intergenic -21709 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding unique_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553 chr12 104983207 104983450 + 0.563372268424553 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 15349 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-26 chr8 106819247 106819553 + 0.563372268424553 NA intron (NM_173037, intron 17 of 17) intron (NM_173037, intron 17 of 17) -50842 NM_008217 15118 Mm.56986 NM_008217 ENSMUSG00000031910 Has3 - hyaluronan synthase 3 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-18 chr9 103133696 103134116 + 0.563372268424553 NA intron (NM_173781, intron 1 of 7) intron (NM_173781, intron 1 of 7) 21832 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-23 chr5 137108300 137108733 + 0.563372268424553 NA Intergenic Intergenic 7691 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-4 chr15 77801742 77801958 + 0.563372268424553 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 40325 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-4 chr7 90095375 90095647 + 0.563372268424553 NA Intergenic Intergenic 33963 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-17 chr8 109144569 109144912 + 0.563372268424553 NA TTS (NR_151498) TTS (NR_151498) 69518 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-3 chr10 75251992 75252374 + 0.563372268424553 NA intron (NM_153406, intron 5 of 15) intron (NM_153406, intron 5 of 15) 39793 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-7 chr12 95488667 95488928 + 0.563372268424553 NA Intergenic Intergenic -203429 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-10 chr2 155751143 155751606 + 0.563372268424553 NA 5' UTR (NM_011171, exon 1 of 4) 5' UTR (NM_011171, exon 1 of 4) 157 NM_011171 19124 Mm.3243 NM_011171 ENSMUSG00000027611 Procr AI325044|Ccca|Ccd41|Epcr protein C receptor, endothelial protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-18 chr8 44992114 44992414 + 0.563372268424553 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 42056 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-14 chr17 72934850 72935213 + 0.563372268424553 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 16726 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553 chr1 151677707 151678018 + 0.563372268424553 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) 76865 NR_151474 102640772 NR_151473 ENSMUSG00000100594 2810414N06Rik - RIKEN cDNA 2810414N06 gene ncRNA unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-14 chr6 82736961 82737284 + 0.563372268424553 NA intron (NM_013820, intron 9 of 17) intron (NM_013820, intron 9 of 17) 37332 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-20 chr9 103043082 103043352 + 0.563372268424553 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 34728 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-15 chr6 145977591 145977895 + 0.563372268424553 NA Intergenic Intergenic 43621 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-15 chr4 117189758 117189958 + 0.563372268424553 NA Intergenic Intergenic -7234 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-12 chr3 38116265 38116638 + 0.563372268424553 NA Intergenic Intergenic 91668 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-23 chr6 88842559 88843010 + 0.563372268424553 NA promoter-TSS (NM_030251) promoter-TSS (NM_030251) -70 NR_045880 100038356 Mm.442704 NR_045880 ENSMUSG00000085828 Gm15612 - predicted gene 15612 ncRNA common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-7 chr11 120238775 120239068 + 0.563372268424553 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 5974 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-15 chr17 83215524 83215741 + 0.563372268424553 NA exon (NM_134117, exon 1 of 7) exon (NM_134117, exon 1 of 7) 349 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-2 chr1 118658750 118659198 + 0.563372268424553 NA intron (NM_023755, intron 6 of 14) intron (NM_023755, intron 6 of 14) 31029 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-15 chr19 10763824 10764050 + 0.563372268424553 NA intron (NR_027805, intron 1 of 3) intron (NR_027805, intron 1 of 3) 22990 NR_027805 403202 Mm.34482 NM_207529 ENSMUSG00000067577 A430093F15Rik Gm674 RIKEN cDNA A430093F15 gene ncRNA common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-2 chr1 177338629 177338840 + 0.563372268424553 NA Intergenic Intergenic -89967 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-17 chr7 116295283 116295640 + 0.563372268424553 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 12915 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-7 chr16 33400556 33400802 + 0.563372268424553 NA intron (NM_001358569, intron 1 of 8) intron (NM_001358569, intron 1 of 8) 234 NM_001358569 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak1_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-2 chr16 35022789 35023132 + 0.563372268424553 NA intron (NM_023587, intron 1 of 6) CpG 539 NM_023587 70757 Mm.27286 NM_023587 ENSMUSG00000035376 Hacd2 6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb 3-hydroxyacyl-CoA dehydratase 2 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-6 chr12 69825182 69825419 + 0.563372268424553 NA intron (NR_033573, intron 4 of 7) intron (NR_033573, intron 4 of 7) -18386 NR_038173 70934 Mm.440427 NR_038172 4931403G20Rik - RIKEN cDNA 4931403G20 gene ncRNA unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-18 chr8 27134569 27134795 + 0.563372268424553 NA Intergenic Intergenic -6050 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-16 chr7 141339200 141339563 + 0.563372268424553 NA promoter-TSS (NM_001282073) promoter-TSS (NM_001282073) 379 NM_133191 98845 Mm.27451 NM_133191 ENSMUSG00000025504 Eps8l2 AI042819|AW545405|Eps8r2 EPS8-like 2 protein-coding common_peak1_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-5 chr9 41805512 41805743 + 0.563372268424553 NA Intergenic Intergenic 223701 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-8 chr14 30878952 30879221 + 0.563372268424553 NA promoter-TSS (NM_181390) promoter-TSS (NM_181390) -171 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-20 chr8 128458271 128458595 + 0.563372268424553 NA intron (NM_001358959, intron 7 of 16) intron (NM_001358959, intron 7 of 16) 99192 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_21_12_0.485790664029212_3.9433350501557_0.563372268424553-5 chr6 99484919 99485172 + 0.563372268424553 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 35948 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-8 chr18 33464047 33464312 + 0.563372268424553 NA promoter-TSS (NR_045415) promoter-TSS (NR_045415) 16 NR_045415 433171 Mm.353332 NR_045415 Gm10549 - predicted gene 10549 ncRNA unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-9 chr17 3419957 3420401 + 0.563372268424553 NA intron (NM_011878, intron 3 of 26) intron (NM_011878, intron 3 of 26) 22972 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-29 chrX 73674560 73675035 + 0.563372268424553 NA intron (NM_001142809, intron 1 of 12) MIR3|SINE|MIR 1664 NM_001142809 102857 Mm.274553 NM_133987 ENSMUSG00000019558 Slc6a8 AA589632|CRT|CRTR|CT1|CTR5|Creat solute carrier family 6 (neurotransmitter transporter, creatine), member 8 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-10 chr18 84850524 84850987 + 0.563372268424553 NA promoter-TSS (NM_025797) promoter-TSS (NM_025797) -583 NM_025797 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-13 chr6 82116031 82116380 + 0.563372268424553 NA Intergenic Intergenic 74577 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak1_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-3 chr16 86401519 86401848 + 0.563372268424553 NA Intergenic Intergenic 404830 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-24 chr7 130950804 130951055 + 0.563372268424553 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 14726 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-17 chr3 142424091 142424317 + 0.563372268424553 NA Intergenic Intergenic -28508 NM_019808 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-8 chr12 84885520 84885766 + 0.563372268424553 NA Intergenic Intergenic -9148 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-11 chr2 127270775 127271073 + 0.563372268424553 NA intron (NM_139308, intron 1 of 7) intron (NM_139308, intron 1 of 7) 695 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak1_14_18_-0.610339988671212_3.94275751910798_0.563372268424553 chr14 7860928 7861221 + 0.563372268424553 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 43117 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-24 chr6 140548329 140548518 + 0.563372268424553 NA intron (NM_144920, intron 11 of 30) intron (NM_144920, intron 11 of 30) -74240 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-10 chr2 102943374 102943755 + 0.563372268424553 NA Intergenic Intergenic -41899 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-9 chr13 32938647 32939115 + 0.563372268424553 NA Intergenic Intergenic -26632 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-6 chr11 20111585 20111959 + 0.563372268424553 NA intron (NM_146243, intron 1 of 8) intron (NM_146243, intron 1 of 8) 1179 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-15 chr6 88928948 88929224 + 0.563372268424553 NA Intergenic Intergenic 26835 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-21 chr3 84480715 84480962 + 0.563372268424553 NA promoter-TSS (NM_001033301) promoter-TSS (NM_001033301) -399 NM_001033301 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-11 chr19 12487665 12487859 + 0.563372268424553 NA intron (NM_172442, intron 2 of 8) intron (NM_172442, intron 2 of 8) 14234 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-14 chr4 47353252 47353470 + 0.563372268424553 NA exon (NM_009370, exon 1 of 9) exon (NM_009370, exon 1 of 9) 139 NM_009370 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-9 chr15 37613710 37614114 + 0.563372268424553 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 66662 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-4 chr10 80024545 80024756 + 0.563372268424553 NA intron (NM_001347074, intron 10 of 22) intron (NM_001347074, intron 10 of 22) 4975 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Arhgap45 6330406L22Rik|AW539505|Ha-1|Hmha1 Rho GTPase activating protein 45 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-21 chr4 126102048 126102317 + 0.563372268424553 NA Intergenic Intergenic -1775 NM_028800 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-12 chr16 28929160 28929486 + 0.563372268424553 NA intron (NM_177718, intron 1 of 1) CpG 375 NM_177718 239796 Mm.155887 NM_177718 ENSMUSG00000051065 Mb21d2 1600021P15Rik|A430031N04|C87006 Mab-21 domain containing 2 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-18 chr4 75277986 75278310 + 0.563372268424553 NA exon (NM_025849, exon 1 of 2) exon (NM_025849, exon 1 of 2) 144 NM_025849 66928 Mm.24332 NM_025849 ENSMUSG00000028398 Dmac1 1700027K24Rik|3110001D03Rik|Tmem261 distal membrane arm assembly complex 1 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-12 chr2 125278837 125279123 + 0.563372268424553 NA Intergenic Intergenic 31465 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-21 chr4 132843413 132843814 + 0.563372268424553 NA promoter-TSS (NM_146154) promoter-TSS (NM_146154) -444 NM_146154 100336 Mm.105230 NM_146154 ENSMUSG00000028882 Ppp1r8 6330548N22Rik|AU044684|NIPP1 protein phosphatase 1, regulatory (inhibitor) subunit 8 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-19 chrX 106015830 106016157 + 0.563372268424553 NA intron (NM_025379, intron 1 of 2) intron (NM_025379, intron 1 of 2) 293 NM_025379 66142 Mm.197728 NM_025379 ENSMUSG00000031231 Cox7b 1100001F07Rik|1110004F07Rik|C80563 cytochrome c oxidase subunit VIIb protein-coding unique_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-4 chr12 116262711 116262994 + 0.563372268424553 NA exon (NM_146039, exon 1 of 22) exon (NM_146039, exon 1 of 22) 173 NM_146039 217935 Mm.31382 NM_146039 ENSMUSG00000042050 Wdr60 D430033N04Rik WD repeat domain 60 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-25 chr7 139843259 139843596 + 0.563372268424553 NA intron (NM_177469, intron 3 of 7) intron (NM_177469, intron 3 of 7) 9253 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding unique_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-5 chr11 117310240 117310646 + 0.563372268424553 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -21272 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_14_18_-0.610339988671212_3.94275751910798_0.563372268424553-22 chrX 135742787 135743037 + 0.563372268424553 NA 5' UTR (NM_026081, exon 1 of 11) 5' UTR (NM_026081, exon 1 of 11) 220 NM_001005385 67298 Mm.271980 NM_026081 ENSMUSG00000043384 Gprasp1 2210415K24Rik|3110031O14Rik|C87852|GASP|GASP1 G protein-coupled receptor associated sorting protein 1 protein-coding common_peak1_21_12_0.485790664029212_3.9433350501557_0.563372268424553-5 chr11 58021782 58022058 + 0.563372268424553 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 12856 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_13_18_-0.709173440078416_3.89334079340438_0.563372268424553-6 chr17 80763556 80763796 + 0.563372268424553 NA Intergenic Intergenic -35651 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_191_176_-0.17789484235748_7.37865812890426_0.56281164495213 chr9 57260844 57262724 + 0.56281164495213 NA intron (NM_028820, intron 1 of 2) CpG 815 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak2_215_156_0.163816142862044_7.37652882032265_0.56281164495213 chr7 112225959 112227602 + 0.56281164495213 NA intron (NM_001193305, intron 1 of 25) intron (NM_001193305, intron 1 of 25) 944 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_260_190_0.152100418223184_7.65347903714734_0.562601610560261 chr2 167776396 167779097 + 0.562601610560261 NA Intergenic Intergenic 86569 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_123_86_0.22045106413081_6.55316902791413_0.562584321496861 chr10 127266344 127267202 + 0.562584321496861 NA intron (NM_027151, intron 1 of 13) CpG 511 NM_001190453 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding common_peak2_123_86_0.22045106413081_6.55316902791413_0.562584321496861 chr12 101912345 101913482 + 0.562584321496861 NA non-coding (NR_152255, exon 1 of 2) non-coding (NR_152255, exon 1 of 2) 246 NR_152255 100504056 Mm.416837 NR_152255 Gm20036 - predicted gene, 20036 ncRNA common_peak1_123_86_0.22045106413081_6.55316902791413_0.562584321496861-2 chr3 90293324 90294479 + 0.562584321496861 NA Intergenic CpG 23752 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak2_123_86_0.22045106413081_6.55316902791413_0.562584321496861-2 chr15 77847890 77848618 + 0.562584321496861 NA Intergenic Intergenic -6079 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_211_194_-0.175670217626239_7.51949520493649_0.562104271573736 chr19 45659370 45660676 + 0.562104271573736 NA exon (NM_013907, exon 1 of 9) exon (NM_013907, exon 1 of 9) 170 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding common_peak2_65_66_-0.306078185633258_5.91305009764114_0.562042725830394-3 chr5 125268748 125269283 + 0.562042725830394 NA Intergenic Intergenic 72079 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding common_peak2_65_66_-0.306078185633258_5.91305009764114_0.562042725830394 chr1 118310719 118311447 + 0.562042725830394 NA promoter-TSS (NR_153836) promoter-TSS (NR_153836) 263 NM_011650 22099 Mm.426637 NM_011650 ENSMUSG00000026374 Tsn 2610034C24Rik|AU040286|C3PO|TB-RBP translin protein-coding common_peak1_79_54_0.254227270300526_5.90847334867492_0.562042725830394-2 chr4 34686910 34687833 + 0.562042725830394 NA promoter-TSS (NM_011895) promoter-TSS (NM_011895) 67 NM_011895 24060 Mm.281885 NM_011895 ENSMUSG00000028293 Slc35a1 AA408150|AI314851 solute carrier family 35 (CMP-sialic acid transporter), member 1 protein-coding common_peak1_80_54_0.272022739602954_5.91737108332614_0.562042725830394-2 chr2 126303941 126304828 + 0.562042725830394 NA Intergenic Intergenic 152243 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_65_66_-0.306078185633258_5.91305009764114_0.562042725830394 chr14 34501862 34502627 + 0.562042725830394 NA intron (NM_009758, intron 1 of 12) CpG 302 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5 bone morphogenetic protein receptor, type 1A protein-coding common_peak2_65_66_-0.306078185633258_5.91305009764114_0.562042725830394-2 chr19 41270375 41271469 + 0.562042725830394 NA Intergenic Intergenic -6918 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak2_80_54_0.272022739602954_5.91737108332614_0.562042725830394 chr10 128695333 128696134 + 0.562042725830394 NA intron (NM_177411, intron 1 of 5) intron (NM_177411, intron 1 of 5) 535 NM_177411 19344 Mm.12815 NM_011229 ENSMUSG00000000711 Rab5b C030027M18Rik RAB5B, member RAS oncogene family protein-coding common_peak1_79_54_0.254227270300526_5.90847334867492_0.562042725830394 chr19 53421452 53422036 + 0.562042725830394 NA Intergenic Intergenic -31110 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_80_54_0.272022739602954_5.91737108332614_0.562042725830394 chr19 18746282 18747408 + 0.562042725830394 NA Intergenic Intergenic -3138 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-30 chr8 57488253 57488505 + 0.562038191119711 NA promoter-TSS (NM_021788) promoter-TSS (NM_021788) 416 NR_126555 78353 Mm.426240 NR_126553 ENSMUSG00000096917 2500002B13Rik - RIKEN cDNA 2500002B13 gene ncRNA common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-11 chr5 29854021 29854335 + 0.562038191119711 NA Intergenic Intergenic -118242 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-20 chr19 10157591 10157870 + 0.562038191119711 NA Intergenic Intergenic -25158 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-14 chr15 64686371 64686758 + 0.562038191119711 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 235732 NM_001331075 11514 Mm.1425 NM_009623 ENSMUSG00000022376 Adcy8 AC8|AW060868 adenylate cyclase 8 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-17 chr16 85137751 85137966 + 0.562038191119711 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 35849 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-32 chr9 99576490 99576781 + 0.562038191119711 NA exon (NM_031403, exon 2 of 8) exon (NM_031403, exon 2 of 8) 836 NM_031403 83703 Mm.31324 NM_031403 ENSMUSG00000032469 Dbr1 AW018415 debranching RNA lariats 1 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-11 chr12 25099138 25099350 + 0.562038191119711 NA Intergenic Intergenic -3152 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-6 chr11 59964645 59964855 + 0.562038191119711 NA exon (NM_009026, exon 1 of 2) exon (NM_009026, exon 1 of 2) 194 NM_009026 19416 Mm.3903 NM_009026 ENSMUSG00000049892 Rasd1 Dexras1 RAS, dexamethasone-induced 1 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-5 chr11 54786263 54786480 + 0.562038191119711 NA intron (NM_178626, intron 1 of 5) intron (NM_178626, intron 1 of 5) 1332 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-6 chr10 17547022 17547292 + 0.562038191119711 NA Intergenic Intergenic -176071 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-26 chr6 53723339 53723561 + 0.562038191119711 NA Intergenic Intergenic 97375 NM_025817 66873 Mm.422727 NM_025817 ENSMUSG00000043496 Tril 1200009O22Rik|AI316813|mKIAA0644 TLR4 interactor with leucine-rich repeats protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-10 chr4 134985848 134986052 + 0.562038191119711 NA Intergenic Intergenic 54970 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-12 chr14 121184120 121184407 + 0.562038191119711 NA intron (NM_134082, intron 2 of 26) intron (NM_134082, intron 2 of 26) -64443 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-22 chr2 27471343 27471657 + 0.562038191119711 NA intron (NM_001113573, intron 1 of 11) intron (NM_001113573, intron 1 of 11) 3898 NM_023336 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-13 chrX 139871187 139871421 + 0.562038191119711 NA exon (NM_029413, exon 1 of 16) exon (NM_029413, exon 1 of 16) 350 NM_029413 75746 Mm.23269 NM_029413 ENSMUSG00000031434 Morc4 1600017G11Rik|5630401M14Rik|AA117449|Zcwcc2 microrchidia 4 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-15 chr15 75920265 75920465 + 0.562038191119711 NA intron (NM_025412, intron 1 of 5) intron (NM_025412, intron 1 of 5) 1195 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-3 chr11 12430083 12430427 + 0.562038191119711 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) -18115 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-12 chr8 128163679 128163923 + 0.562038191119711 NA Intergenic Intergenic 114424 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-18 chr16 93247134 93247467 + 0.562038191119711 NA Intergenic Intergenic 105889 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-5 chr1 180811886 180812165 + 0.562038191119711 NA intron (NM_008210, intron 1 of 3) intron (NM_008210, intron 1 of 3) 1580 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-4 chr1 172203711 172204011 + 0.562038191119711 NA intron (NM_001329871, intron 1 of 3) intron (NM_001329871, intron 1 of 3) 2943 NM_001329871 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-33 chrX 8175576 8175863 + 0.562038191119711 NA exon (NM_001166437, exon 2 of 7) exon (NM_001166437, exon 2 of 7) 462 NM_001166437 209815 Mm.122963 NM_172478 ENSMUSG00000039201 Tbc1d25 6330576A08Rik|DXHXS7927e|Oatl1 TBC1 domain family, member 25 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711 chr1 40223690 40223960 + 0.562038191119711 NA Intergenic Intergenic -1255 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-2 chr1 138929833 138930142 + 0.562038191119711 NA Intergenic Intergenic -33722 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-28 chr7 139516118 139516361 + 0.562038191119711 NA intron (NM_183144, intron 5 of 15) intron (NM_183144, intron 5 of 15) 66558 NM_183248 14912 Mm.28308 NM_183248 ENSMUSG00000041309 Nkx6-2 Gtx|Nkx6.2 NK6 homeobox 2 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-23 chr3 69007245 69007637 + 0.562038191119711 NA intron (NM_001356976, intron 3 of 23) intron (NM_001356976, intron 3 of 23) -2331 NR_029529 387175 NR_029529 ENSMUSG00000065580 Mir15b Mirn15b|mir-15b|mmu-mir-15b microRNA 15b ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-29 chr7 145103767 145104127 + 0.562038191119711 NA Intergenic Intergenic 104172 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-8 chr12 69389043 69389284 + 0.562038191119711 NA Intergenic B1_Mur1|SINE|Alu 17013 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-10 chr11 77791344 77791587 + 0.562038191119711 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) -9833 NM_001291214 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-16 chr16 30067366 30067666 + 0.562038191119711 NA 3' UTR (NM_008235, exon 4 of 4) 3' UTR (NM_008235, exon 4 of 4) 2159 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-13 chr15 51621192 51621564 + 0.562038191119711 NA Intergenic Intergenic -225768 NR_045092 100502643 Mm.131987 NR_045092 ENSMUSG00000115654 Gm19303 - predicted gene, 19303 ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-31 chr8 81867703 81867972 + 0.562038191119711 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 525275 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-3 chr1 169968914 169969136 + 0.562038191119711 NA promoter-TSS (NR_040438) promoter-TSS (NR_040438) 180 NM_010476 15490 Mm.12882 NM_010476 ENSMUSG00000026675 Hsd17b7 AI266814|ERG27 hydroxysteroid (17-beta) dehydrogenase 7 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-4 chr11 31226111 31226433 + 0.562038191119711 NA Intergenic RMER6BA|LTR|ERVK 143789 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-9 chr10 128082490 128082863 + 0.562038191119711 NA promoter-TSS (NM_016774) promoter-TSS (NM_016774) -631 NM_016774 11947 Mm.238973 NM_016774 ENSMUSG00000025393 Atp5b Atp5f1b ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-2 chr1 163779805 163780072 + 0.562038191119711 NA intron (NM_001305643, intron 1 of 19) intron (NM_001305643, intron 1 of 19) 355 NM_010629 16579 Mm.4651 NM_010629 ENSMUSG00000026585 Kifap3 KAP-3|KAP3|SMAP kinesin-associated protein 3 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711 chr1 151236532 151236875 + 0.562038191119711 NA Intergenic Intergenic 98669 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-27 chr6 135250949 135251303 + 0.562038191119711 NA intron (NM_001080553, intron 1 of 5) intron (NM_001080553, intron 1 of 5) 3210 NM_010352 14840 Mm.272306 NM_010352 ENSMUSG00000030206 Gsg1 - germ cell associated 1 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-21 chr2 27390198 27390468 + 0.562038191119711 NA intron (NM_009500, intron 1 of 27) intron (NM_009500, intron 1 of 27) 37275 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-25 chr4 126112567 126112979 + 0.562038191119711 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 8816 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-7 chr10 83359617 83359882 + 0.562038191119711 NA promoter-TSS (NM_026579) promoter-TSS (NM_026579) -472 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-19 chr17 80802571 80802930 + 0.562038191119711 NA Intergenic Intergenic -74725 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-7 chr11 84828244 84828545 + 0.562038191119711 NA promoter-TSS (NR_046281) promoter-TSS (NR_046281) 609 NM_177564 192970 Mm.192213 NM_177564 ENSMUSG00000034449 Dhrs11 - dehydrogenase/reductase (SDR family) member 11 protein-coding unique_peak1_9_13_-0.750602999512686_3.43205342230126_0.562038191119711 chr8 54527267 54527594 + 0.562038191119711 NA intron (NM_029701, intron 2 of 4) ID_B1|SINE|B4 2568 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-8 chr10 89526262 89526572 + 0.562038191119711 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 7205 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding unique_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-24 chr3 86010930 86011133 + 0.562038191119711 NA Intergenic Intergenic -8540 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding common_peak2_9_13_-0.750602999512686_3.43205342230126_0.562038191119711-9 chr2 137659853 137660063 + 0.562038191119711 NA Intergenic Intergenic -543438 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-44 chr7 134226392 134226718 + 0.562038191119709 NA Intergenic Intergenic -1458 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-2 chr10 121474982 121475280 + 0.562038191119709 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 1119 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-11 chr12 99941220 99941501 + 0.562038191119709 NA intron (NM_028354, intron 14 of 15) intron (NM_028354, intron 14 of 15) -23139 NM_001164426 217826 Mm.312335 NM_146037 ENSMUSG00000045404 Kcnk13 BB085247|F730021E22Rik|Gm1570|Gm1685 potassium channel, subfamily K, member 13 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-38 chr6 33804827 33805216 + 0.562038191119709 NA intron (NM_009148, intron 11 of 17) intron (NM_009148, intron 11 of 17) -224427 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-10 chrX 104413570 104413765 + 0.562038191119709 NA exon (NM_009592, exon 1 of 16) exon (NM_009592, exon 1 of 16) 179 NM_009592 11306 Mm.426128 NM_009592 ENSMUSG00000031333 Abcb7 AA517758|AU019072|Abc7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-3 chr10 17037097 17037362 + 0.562038191119709 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 58553 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-3 chr13 98012206 98012407 + 0.562038191119709 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 193859 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-39 chr6 42511375 42511586 + 0.562038191119709 NA Intergenic Intergenic -24266 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-10 chr11 104618282 104618579 + 0.562038191119709 NA intron (NM_016780, intron 1 of 14) C-rich|Low_complexity|Low_complexity 10430 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-9 chr5 92861933 92862183 + 0.562038191119709 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -35935 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-7 chr11 16702435 16702696 + 0.562038191119709 NA Intergenic Intergenic -49638 NM_207655 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-9 chr11 69040501 69040720 + 0.562038191119709 NA Intergenic Intergenic -5027 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-32 chr4 118103383 118103592 + 0.562038191119709 NA intron (NM_001285520, intron 2 of 11) intron (NM_001285520, intron 2 of 11) 31459 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-37 chr6 17507297 17507569 + 0.562038191119709 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 43476 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-27 chr3 87980168 87980366 + 0.562038191119709 NA 3' UTR (NM_016701, exon 4 of 4) 3' UTR (NM_016701, exon 4 of 4) 9174 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-26 chr3 54478322 54478603 + 0.562038191119709 NA Intergenic Intergenic 117355 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-6 chr3 121469778 121470032 + 0.562038191119709 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 43364 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-22 chr19 28248725 28248964 + 0.562038191119709 NA Intergenic Intergenic -237678 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-53 chr9 123162343 123162583 + 0.562038191119709 NA Intergenic Intergenic 11517 NM_011606 21922 Mm.34588 NM_011606 ENSMUSG00000025784 Clec3b Tna C-type lectin domain family 3, member b protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-31 chr4 62998987 62999247 + 0.562038191119709 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 33543 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-47 chr8 70903923 70904148 + 0.562038191119709 NA Intergenic Intergenic -1939 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-5 chr10 108376781 108377086 + 0.562038191119709 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 44744 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-21 chr17 80705240 80705518 + 0.562038191119709 NA intron (NM_001360278, intron 1 of 33) intron (NM_001360278, intron 1 of 33) 22646 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709 chr1 75168774 75168977 + 0.562038191119709 NA exon (NM_001159906, exon 2 of 10) exon (NM_001159906, exon 2 of 10) 140 NM_026846 68818 Mm.32646 NM_026846 ENSMUSG00000026197 Zfand2b 1110060O18Rik|C81256 zinc finger, AN1 type domain 2B protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-41 chr7 27804365 27804667 + 0.562038191119709 NA Intergenic Intergenic -2680 NM_027703 71163 Mm.440493 NM_027703 ENSMUSG00000030604 Zfp626 4833408D11Rik|4933426I21Rik|7630402I04Rik zinc finger protein 626 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-2 chr1 192779076 192779375 + 0.562038191119709 NA Intergenic Intergenic -8006 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-49 chr8 95085199 95085530 + 0.562038191119709 NA intron (NM_028805, intron 2 of 19) intron (NM_028805, intron 2 of 19) 4163 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-8 chr11 59893309 59893551 + 0.562038191119709 NA Intergenic Intergenic -28069 NR_130986 69854 Mm.57859 NR_130986 ENSMUSG00000085551 1810063I02Rik - RIKEN cDNA 1810063I02 gene ncRNA unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-28 chr3 88634681 88634907 + 0.562038191119709 NA intron (NM_001198913, intron 8 of 21) RSINE1|SINE|B4 13400 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-17 chr16 34825018 34825260 + 0.562038191119709 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 40189 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-7 chr3 145615375 145615613 + 0.562038191119709 NA Intergenic Intergenic 34491 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-14 chr15 41731986 41732217 + 0.562038191119709 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -56894 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-23 chr19 37922502 37922728 + 0.562038191119709 NA intron (NM_001302140, intron 41 of 53) intron (NM_001302140, intron 41 of 53) 120962 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_15_8_0.560115042775484_3.44998252283005_0.562038191119709-3 chr6 70880755 70880972 + 0.562038191119709 NA intron (NM_010121, intron 4 of 16) intron (NM_010121, intron 4 of 16) 36348 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-48 chr8 84334678 84334971 + 0.562038191119709 NA Intergenic Intergenic -64422 NM_026350 67736 Mm.30095 NM_026350 ENSMUSG00000004994 Ccdc130 4930527D15Rik|C77430 coiled-coil domain containing 130 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-43 chr7 98698939 98699228 + 0.562038191119709 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 3845 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-52 chr9 117957137 117957375 + 0.562038191119709 NA Intergenic Intergenic -83266 NM_001286507 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-13 chr14 75830352 75830704 + 0.562038191119709 NA Intergenic B4A|SINE|B4 14436 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709 chr10 77020893 77021161 + 0.562038191119709 NA intron (NR_152191, intron 1 of 3) intron (NR_152191, intron 1 of 3) 8548 NR_152191 100041099 Mm.426631 NR_152191 Gm3137 - predicted gene, 3137 ncRNA common_peak2_15_8_0.560115042775484_3.44998252283005_0.562038191119709-4 chr7 28958327 28958550 + 0.562038191119709 NA intron (NM_021895, intron 1 of 20) PB1D11|SINE|Alu 3894 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-33 chr5 23993650 23993900 + 0.562038191119709 NA intron (NM_001310471, intron 2 of 10) intron (NM_001310471, intron 2 of 10) 36537 NM_001310471 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-18 chr17 27056176 27056437 + 0.562038191119709 NA promoter-TSS (NM_080553) promoter-TSS (NM_080553) -998 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-4 chr10 60534766 60535060 + 0.562038191119709 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 135187 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-16 chr16 25394943 25395179 + 0.562038191119709 NA intron (NM_175165, intron 4 of 5) intron (NM_175165, intron 4 of 5) 108244 NM_175165 71338 Mm.126851 NM_175165 ENSMUSG00000048399 Tprg 5430420C16Rik|Tprg1 transformation related protein 63 regulated protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-6 chr10 118122504 118122799 + 0.562038191119709 NA Intergenic Intergenic -19136 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-46 chr8 8651647 8651864 + 0.562038191119709 NA intron (NM_010111, intron 1 of 4) intron (NM_010111, intron 1 of 4) 9018 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-51 chr9 21753703 21753908 + 0.562038191119709 NA Intergenic Intergenic 6498 NR_151672 67629 Mm.295642 NM_026282 ENSMUSG00000074476 Spc24 2410030K01Rik|AV109292|Spbc24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-42 chr7 75575873 75576153 + 0.562038191119709 NA intron (NM_029332, intron 3 of 36) intron (NM_029332, intron 3 of 36) 120479 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak2_15_8_0.560115042775484_3.44998252283005_0.562038191119709-5 chr8 12802274 12802476 + 0.562038191119709 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 29544 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-4 chr16 57166966 57167186 + 0.562038191119709 NA intron (NM_023175, intron 1 of 9) CpG 256 NM_023175 52633 Mm.383203 NM_023175 ENSMUSG00000022751 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-36 chr5 151706567 151706788 + 0.562038191119709 NA Intergenic Intergenic -55469 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-19 chr17 45788647 45788928 + 0.562038191119709 NA Intergenic Intergenic 54281 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-5 chr18 4523286 4523496 + 0.562038191119709 NA Intergenic Intergenic -111538 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak2_15_8_0.560115042775484_3.44998252283005_0.562038191119709 chr15 99875101 99875314 + 0.562038191119709 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 249 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-8 chr4 89460104 89460352 + 0.562038191119709 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -149196 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-34 chr5 115019000 115019272 + 0.562038191119709 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 7612 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-25 chr2 29633692 29633896 + 0.562038191119709 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 14074 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-30 chr4 47303721 47304069 + 0.562038191119709 NA exon (NM_009928, exon 34 of 40) exon (NM_009928, exon 34 of 40) -49327 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-12 chr14 21747444 21747767 + 0.562038191119709 NA exon (NM_001007268, exon 2 of 8) exon (NM_001007268, exon 2 of 8) 1017 NM_001007268 27389 Mm.390674 NM_013849 ENSMUSG00000021768 Dusp13 DUSP13A|DUSP13B|Gm1203|LMW-DSP6|MDSP|TMDP|TS-DSP6 dual specificity phosphatase 13 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-20 chr17 78362551 78362779 + 0.562038191119709 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 55487 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-29 chr3 126692330 126692708 + 0.562038191119709 NA intron (NM_001025438, intron 3 of 18) intron (NM_001025438, intron 3 of 18) 95568 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-35 chr5 134582847 134583045 + 0.562038191119709 NA intron (NM_020022, intron 1 of 10) intron (NM_020022, intron 1 of 10) 256 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-40 chr6 94640547 94640781 + 0.562038191119709 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -34249 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA common_peak2_15_8_0.560115042775484_3.44998252283005_0.562038191119709-6 chr8 14324724 14324988 + 0.562038191119709 NA intron (NM_172910, intron 3 of 15) intron (NM_172910, intron 3 of 15) 228981 NM_172910 244310 Mm.404697 NM_172910 ENSMUSG00000047495 Dlgap2 6430596N04Rik|Dap-2|Dap2|Sapap2 DLG associated protein 2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-50 chr8 95210446 95210639 + 0.562038191119709 NA Intergenic Intergenic -68002 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-45 chr8 6963030 6963261 + 0.562038191119709 NA Intergenic Intergenic 1697628 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-24 chr19 41250021 41250393 + 0.562038191119709 NA intron (NM_133352, intron 2 of 14) intron (NM_133352, intron 2 of 14) 13797 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak2_15_8_0.560115042775484_3.44998252283005_0.562038191119709-2 chr17 14993338 14993556 + 0.562038191119709 NA intron (NM_198104, intron 1 of 3) CpG 14583 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding unique_peak1_15_8_0.560115042775484_3.44998252283005_0.562038191119709-15 chr15 85684416 85684668 + 0.562038191119709 NA Intergenic Intergenic -19231 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-6 chr12 70706468 70706906 + 0.561823156887258 NA Intergenic Intergenic -118827 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-5 chr14 61682598 61682994 + 0.561823156887258 NA promoter-TSS (NR_028264) promoter-TSS (NR_028264) -423 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-7 chr17 34592333 34592721 + 0.561823156887258 NA promoter-TSS (NM_017463) promoter-TSS (NM_017463) 56 NM_017463 18515 Mm.390957 NM_017463 ENSMUSG00000034673 Pbx2 AU043397|G17 pre B cell leukemia homeobox 2 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-12 chr8 68011880 68012239 + 0.561823156887258 NA Intergenic Intergenic -37485 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-10 chr7 83632025 83632360 + 0.561823156887258 NA intron (NM_023377, intron 1 of 5) intron (NM_023377, intron 1 of 5) 175 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-2 chr11 94990346 94990814 + 0.561823156887258 NA promoter-TSS (NM_172261) promoter-TSS (NM_172261) -632 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-7 chr14 25506149 25506677 + 0.561823156887258 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -28026 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-4 chr11 90249534 90249842 + 0.561823156887258 NA 5' UTR (NM_026178, exon 1 of 7) 5' UTR (NM_026178, exon 1 of 7) 212 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding unique_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-4 chr15 5537847 5538132 + 0.561823156887258 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 41671 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258 chr12 113001132 113001519 + 0.561823156887258 NA promoter-TSS (NM_028193) promoter-TSS (NM_028193) -704 NM_028193 72308 Mm.196721 NM_028193 ENSMUSG00000011158 Brf1 2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein-coding common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-4 chr13 114818318 114818524 + 0.561823156887258 NA intron (NM_001113375, intron 1 of 5) CpG 184 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-6 chr2 152825477 152825876 + 0.561823156887258 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 2813 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-2 chr12 5177333 5177553 + 0.561823156887258 NA intron (NM_001164493, intron 3 of 13) intron (NM_001164493, intron 3 of 13) 198239 NM_001164493 208439 Mm.388281 NM_001164493 ENSMUSG00000020627 Klhl29 A230106N14Rik|Gm68|Kbtbd9|mKIAA1921 kelch-like 29 protein-coding common_peak1_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-4 chr8 103373100 103373325 + 0.561823156887258 NA Intergenic Intergenic -25678 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-13 chr8 48110226 48110568 + 0.561823156887258 NA intron (NM_001161515, intron 1 of 5) intron (NM_001161515, intron 1 of 5) 384 NM_001161515 320685 Mm.121549 NM_178788 ENSMUSG00000031562 Dctd 6030466N05Rik dCMP deaminase protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-3 chr11 11461759 11462277 + 0.561823156887258 NA intron (NM_001185153, intron 1 of 7) CpG 401 NM_015785 53604 Mm.9500 NM_015785 ENSMUSG00000020193 Zpbp 4930486K01Rik|Iam38|Sp38 zona pellucida binding protein protein-coding unique_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-5 chr8 31298397 31298854 + 0.561823156887258 NA Intergenic Intergenic -69124 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258 chr10 80386028 80386269 + 0.561823156887258 NA intron (NM_198615, intron 1 of 1) intron (NM_198615, intron 1 of 1) 1503 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding unique_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258 chr1 71102138 71102554 + 0.561823156887258 NA intron (NM_007525, intron 1 of 10) intron (NM_007525, intron 1 of 10) 626 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 - BRCA1 associated RING domain 1 protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258 chr1 135170002 135170318 + 0.561823156887258 NA Intergenic Intergenic -2479 NM_134438 171469 Mm.272290 NM_134438 ENSMUSG00000026424 Gpr37l1 AW047233|CAG-18|D0Kist8 G protein-coupled receptor 37-like 1 protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-12 chr7 29458285 29458661 + 0.561823156887258 NA intron (NM_001081028, intron 2 of 22) intron (NM_001081028, intron 2 of 22) 46987 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak1_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-3 chr6 128399291 128399571 + 0.561823156887258 NA promoter-TSS (NM_021717) promoter-TSS (NM_021717) -335 NM_021717 60345 Mm.269883 NM_021717 ENSMUSG00000001520 Nrip2 AW491344|NIX1 nuclear receptor interacting protein 2 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-11 chr8 47971271 47971575 + 0.561823156887258 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 19128 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding unique_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-2 chr16 55822913 55823322 + 0.561823156887258 NA promoter-TSS (NM_001159394) promoter-TSS (NM_001159394) -979 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258 chr15 81936819 81937187 + 0.561823156887258 NA intron (NM_145473, intron 1 of 3) intron (NM_145473, intron 1 of 3) 244 NM_145473 105859 Mm.22524 NM_145473 ENSMUSG00000042109 Csdc2 AI415250|AI481750|Pippin cold shock domain containing C2, RNA binding protein-coding common_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-3 chr16 4624545 4624760 + 0.561823156887258 NA intron (NM_025571, intron 1 of 4) CpG 294 NM_025571 66449 Mm.354760 NM_025571 ENSMUSG00000014301 Pam16 2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-7 chr17 35780021 35780412 + 0.561823156887258 NA non-coding (NR_045459, exon 3 of 3) non-coding (NR_045459, exon 3 of 3) 7766 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-9 chr5 108660437 108660734 + 0.561823156887258 NA exon (NM_199011, exon 1 of 23) exon (NM_199011, exon 1 of 23) 245 NM_001357029 110524 Mm.260921 NM_199011 ENSMUSG00000004815 Dgkq 110kDa|DAGK|DAGK7|Dagk4|Dgkd diacylglycerol kinase, theta protein-coding common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-2 chr11 61120316 61120649 + 0.561823156887258 NA Intergenic Intergenic -20353 NM_021349 57916 Mm.265915 NM_021349 ENSMUSG00000010142 Tnfrsf13b 1200009E08Rik|Taci tumor necrosis factor receptor superfamily, member 13b protein-coding common_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-5 chr5 150911999 150912303 + 0.561823156887258 NA Intergenic Intergenic -40456 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-4 chr12 25628667 25629197 + 0.561823156887258 NA Intergenic Intergenic 499758 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-8 chr6 17554123 17554548 + 0.561823156887258 NA intron (NM_008591, intron 16 of 21) intron (NM_008591, intron 16 of 21) -82675 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding unique_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258 chr2 11553538 11553936 + 0.561823156887258 NA intron (NM_001177758, intron 1 of 14) CpG 192 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-4 chr11 30771353 30771579 + 0.561823156887258 NA promoter-TSS (NM_134013) promoter-TSS (NM_134013) -309 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-8 chr2 25574714 25574994 + 0.561823156887258 NA promoter-TSS (NM_029293) promoter-TSS (NM_029293) 17 NM_029293 75454 Mm.458079 NM_029293 ENSMUSG00000036504 Phpt1 1700008C22Rik|PHP|Php14 phosphohistidine phosphatase 1 protein-coding unique_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-3 chr6 98957002 98957410 + 0.561823156887258 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 71092 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-5 chr11 101070261 101070518 + 0.561823156887258 NA exon (NM_013792, exon 1 of 6) exon (NM_013792, exon 1 of 6) 295 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258 chr10 80623987 80624309 + 0.561823156887258 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 1368 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258 chr1 43260779 43261119 + 0.561823156887258 NA Intergenic Intergenic -64188 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-6 chr15 102571747 102572060 + 0.561823156887258 NA intron (NM_001310066, intron 2 of 11) intron (NM_001310066, intron 2 of 11) -31105 NR_155446 105246046 NR_155446 LOC105246046 - uncharacterized LOC105246046 ncRNA common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-14 chr9 41489798 41490187 + 0.561823156887258 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) 15099 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-5 chr14 61682620 61683009 + 0.561823156887258 NA promoter-TSS (NR_028264) promoter-TSS (NR_028264) -441 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-3 chr12 51827943 51828465 + 0.561823156887258 NA intron (NM_144788, intron 1 of 42) intron (NM_144788, intron 1 of 42) 1332 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding unique_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-2 chr3 102666117 102666731 + 0.561823156887258 NA Intergenic Intergenic -68346 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-9 chr8 110817539 110817802 + 0.561823156887258 NA exon (NM_133953, exon 18 of 26) exon (NM_133953, exon 18 of 26) -11746 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-5 chrX 74023452 74023696 + 0.561823156887258 NA promoter-TSS (NR_039594) promoter-TSS (NR_039594) 24 NR_039594 100628601 NR_039594 ENSMUSG00000092907 Mir5132 mir-5132|mmu-mir-5132|mu-mir-5132 microRNA 5132 ncRNA unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-6 chr16 33581028 33581323 + 0.561823156887258 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 62580 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-9 chr2 60880330 60880635 + 0.561823156887258 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 956 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258 chr11 115475066 115475508 + 0.561823156887258 NA promoter-TSS (NM_001361594) promoter-TSS (NM_001361594) -380 NM_177778 276905 Mm.38019 NM_177778 ENSMUSG00000057219 Armc7 A630084C13|BC023126 armadillo repeat containing 7 protein-coding unique_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-2 chr11 19835017 19835309 + 0.561823156887258 NA Intergenic Intergenic -89279 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-2 chr6 52176359 52176684 + 0.561823156887258 NA intron (NM_010452, intron 3 of 4) intron (NM_010452, intron 3 of 4) 3640 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-9 chr8 84712873 84713103 + 0.561823156887258 NA intron (NM_001081982, intron 9 of 9) intron (NM_001081982, intron 9 of 9) 11531 NM_008535 17095 Mm.4925 NM_008535 ENSMUSG00000034041 Lyl1 Lyl-1|bHLHa18 lymphoblastomic leukemia 1 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-6 chr16 42876101 42876427 + 0.561823156887258 NA promoter-TSS (NR_040521) promoter-TSS (NR_040521) -502 NR_040522 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA unique_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-3 chr6 113482219 113482668 + 0.561823156887258 NA promoter-TSS (NM_133930) promoter-TSS (NM_133930) -913 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-3 chr10 71058945 71059374 + 0.561823156887258 NA intron (NM_031397, intron 2 of 20) intron (NM_031397, intron 2 of 20) 100531 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-10 chr7 12978487 12978989 + 0.561823156887258 NA intron (NM_001168562, intron 1 of 4) intron (NM_001168562, intron 1 of 4) 890 NM_001168561 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-8 chr2 13409209 13409662 + 0.561823156887258 NA intron (NM_001081084, intron 27 of 66) (TAAA)n|Simple_repeat|Simple_repeat 82441 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-4 chr15 11770896 11771191 + 0.561823156887258 NA Intergenic Intergenic 134631 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-11 chr7 89404446 89404761 + 0.561823156887258 NA promoter-TSS (NM_001360746) promoter-TSS (NM_001360746) 237 NM_008055 14366 Mm.86755 NM_008055 ENSMUSG00000049791 Fzd4 Fz4 frizzled class receptor 4 protein-coding unique_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-3 chr14 31189324 31189736 + 0.561823156887258 NA intron (NM_001347583, intron 7 of 13) intron (NM_001347583, intron 7 of 13) 17296 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-8 chr15 27379209 27379488 + 0.561823156887258 NA Intergenic Intergenic -87329 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-7 chr19 9081035 9081593 + 0.561823156887258 NA Intergenic Intergenic 6642 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-6 chr9 82973599 82974099 + 0.561823156887258 NA intron (NM_001081216, intron 4 of 39) intron (NM_001081216, intron 4 of 39) 1640 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-2 chr1 133979201 133979607 + 0.561823156887258 NA Intergenic Intergenic -57850 NM_021355 14264 Mm.287146 NM_021355 ENSMUSG00000041559 Fmod AI131919|AU041740|FM|SLRR2E fibromodulin protein-coding unique_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-2 chr6 102120353 102120967 + 0.561823156887258 NA Intergenic Intergenic -145440 NR_131018 75893 Mm.2968 NR_131017 ENSMUSG00000107563 4930587E11Rik 4930523E13Rik|Gm44188 RIKEN cDNA 4930587E11 gene ncRNA common_peak1_19_24_-0.59415924680305_4.3467765663732_0.561823156887258 chr6 29347556 29347926 + 0.561823156887258 NA promoter-TSS (NM_184053) promoter-TSS (NM_184053) -365 NM_001285412 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-12 chr8 64548025 64548282 + 0.561823156887258 NA Intergenic Intergenic -33712 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-4 chr7 64248309 64248729 + 0.561823156887258 NA intron (NM_001039104, intron 26 of 26) intron (NM_001039104, intron 26 of 26) 1580 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-9 chr16 91728342 91728637 + 0.561823156887258 NA promoter-TSS (NM_010587) promoter-TSS (NM_010587) 313 NM_026994 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-2 chr12 17377357 17377815 + 0.561823156887258 NA intron (NM_001008421, intron 12 of 20) intron (NM_001008421, intron 12 of 20) 22194 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-11 chr7 18909955 18910297 + 0.561823156887258 NA intron (NM_001033314, intron 1 of 13) intron (NM_001033314, intron 1 of 13) 278 NM_001033314 232933 Mm.333624 NM_001033314 ENSMUSG00000074358 Ccdc61 C530028I08Rik|Gm159 coiled-coil domain containing 61 protein-coding unique_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-3 chr7 49212771 49213063 + 0.561823156887258 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -33272 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-5 chr6 94500041 94500558 + 0.561823156887258 NA promoter-TSS (NM_026255) promoter-TSS (NM_026255) -15 NM_026255 67582 Mm.280725 NM_026255 ENSMUSG00000045100 Slc25a26 4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 protein-coding common_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258 chr10 7157613 7157867 + 0.561823156887258 NA intron (NM_172546, intron 2 of 12) intron (NM_172546, intron 2 of 12) 54497 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-8 chr4 137707540 137707944 + 0.561823156887258 NA intron (NM_001331215, intron 1 of 22) intron (NM_001331215, intron 1 of 22) 237 NM_001331215 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-2 chr1 171471374 171471766 + 0.561823156887258 NA Intergenic Intergenic -31908 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding common_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-4 chr18 40219033 40219285 + 0.561823156887258 NA intron (NM_023311, intron 1 of 5) CpG 240 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding unique_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-5 chr16 32666576 32666994 + 0.561823156887258 NA intron (NR_033493, intron 1 of 2) intron (NR_033493, intron 1 of 2) 1412 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak2_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-10 chr4 40143044 40143253 + 0.561823156887258 NA promoter-TSS (NM_007386) promoter-TSS (NM_007386) -117 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding common_peak2_19_24_-0.59415924680305_4.3467765663732_0.561823156887258-5 chr15 93275492 93275756 + 0.561823156887258 NA promoter-TSS (NM_001346785) promoter-TSS (NM_001346785) -445 NM_001346785 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-3 chr11 97449717 97449919 + 0.561823156887258 NA promoter-TSS (NM_021493) promoter-TSS (NM_021493) -342 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_28_17_0.412042999508198_4.37594650119641_0.561823156887258-3 chr11 96969950 96970519 + 0.561823156887258 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 7454 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_20_24_-0.5242665141821_4.38172293268367_0.561823156887258-6 chr7 90342233 90342504 + 0.561823156887258 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 40013 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_28_17_0.412042999508198_4.37594650119641_0.561823156887258-7 chr2 181837700 181838097 + 0.561823156887258 NA promoter-TSS (NM_153594) promoter-TSS (NM_153594) 44 NM_001291211 245867 Mm.491085 NM_153594 ENSMUSG00000027589 Pcmtd2 5330414D10Rik|AI314201 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding common_peak2_153_144_-0.206129617416989_7.07684428130644_0.561800048541168 chr16 92608351 92610163 + 0.561800048541168 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 88072 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_175_126_0.176380756678407_7.07687506511137_0.561800048541168 chr18 10725302 10726688 + 0.561800048541168 NA 5' UTR (NM_144860, exon 1 of 21) 5' UTR (NM_144860, exon 1 of 21) 370 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding common_peak1_153_144_-0.206129617416989_7.07684428130644_0.561800048541168 chr8 31371234 31373215 + 0.561800048541168 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 4475 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_67_45_0.279213921706194_5.66316891691011_0.561693437916869-2 chr11 116022014 116023024 + 0.561693437916869 NA 3' UTR (NM_008211, exon 4 of 4) 3' UTR (NM_008211, exon 4 of 4) 1985 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak1_67_45_0.279213921706194_5.66316891691011_0.561693437916869-4 chr18 6959417 6959888 + 0.561693437916869 NA intron (NM_177595, intron 5 of 6) intron (NM_177595, intron 5 of 6) 45127 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak2_67_45_0.279213921706194_5.66316891691011_0.561693437916869-2 chr12 83921191 83921786 + 0.561693437916869 NA intron (NR_073564, intron 1 of 12) CpG 446 NR_073563 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb NUMB endocytic adaptor protein protein-coding common_peak1_67_45_0.279213921706194_5.66316891691011_0.561693437916869-3 chr12 17881879 17882659 + 0.561693437916869 NA Intergenic CpG 191460 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_67_45_0.279213921706194_5.66316891691011_0.561693437916869 chr1 75218367 75219675 + 0.561693437916869 NA intron (NM_001313723, intron 1 of 3) intron (NM_001313723, intron 1 of 3) 273 NM_001313723 22145 Mm.1155 NM_009447 ENSMUSG00000026202 Tuba4a M[a]4|Tuba4 tubulin, alpha 4A protein-coding common_peak2_67_45_0.279213921706194_5.66316891691011_0.561693437916869-3 chr14 76532412 76533200 + 0.561693437916869 NA TTS (NR_027699) TTS (NR_027699) -11951 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_67_45_0.279213921706194_5.66316891691011_0.561693437916869-5 chr7 27227484 27228515 + 0.561693437916869 NA exon (NM_181593, exon 1 of 7) exon (NM_181593, exon 1 of 7) 598 NM_181593 233011 Mm.30963 NM_181593 ENSMUSG00000003752 Itpkc 9130023N17Rik inositol 1,4,5-trisphosphate 3-kinase C protein-coding common_peak1_67_45_0.279213921706194_5.66316891691011_0.561693437916869-6 chr7 127025417 127026467 + 0.561693437916869 NA exon (NM_010772, exon 2 of 5) exon (NM_010772, exon 2 of 5) 537 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak1_67_45_0.279213921706194_5.66316891691011_0.561693437916869 chr1 75521118 75521823 + 0.561693437916869 NA promoter-TSS (NM_027886) promoter-TSS (NM_027886) -59 NM_027886 71728 Mm.312650 NM_027886 ENSMUSG00000026213 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein protein-coding common_peak2_54_56_-0.334057712813802_5.66586115775784_0.561693437916856-2 chr17 44500872 44501535 + 0.561693437916856 NA intron (NR_073425, intron 5 of 5) intron (NR_073425, intron 5 of 5) 234973 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_54_56_-0.334057712813802_5.66586115775784_0.561693437916856 chr11 120484451 120485228 + 0.561693437916856 NA TTS (NM_008244) TTS (NM_008244) 202 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding common_peak1_54_56_-0.334057712813802_5.66586115775784_0.561693437916856 chr13 114680721 114681430 + 0.561693437916856 NA intron (NR_045976, intron 3 of 6) intron (NR_045976, intron 3 of 6) 73847 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA common_peak2_77_77_-0.286083421752925_6.14236050798579_0.561668673126632 chr1 153125761 153127056 + 0.561668673126632 NA intron (NM_008485, intron 23 of 23) intron (NM_008485, intron 23 of 23) 60039 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_77_77_-0.286083421752925_6.14236050798579_0.561668673126632-2 chr12 31267840 31269481 + 0.561668673126632 NA intron (NM_008482, intron 2 of 32) intron (NM_008482, intron 2 of 32) 3366 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_77_77_-0.286083421752925_6.14236050798579_0.561668673126632 chr17 25183909 25184415 + 0.561668673126632 NA promoter-TSS (NM_183150) promoter-TSS (NM_183150) -399 NM_183150 214489 Mm.274433 NM_183150 ENSMUSG00000067722 BC003965 Ccsmst1 cDNA sequence BC003965 protein-coding common_peak1_93_64_0.244238510700356_6.14448706837863_0.561668673126632 chr18 77938518 77939426 + 0.561668673126632 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 505 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_93_64_0.244238510700356_6.14448706837863_0.561668673126632 chr15 83349266 83350188 + 0.561668673126632 NA intron (NM_001357756, intron 1 of 15) intron (NM_001357756, intron 1 of 15) 520 NM_001357756 66251 Mm.258910 NM_025445 ENSMUSG00000054277 Arfgap3 0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1 ADP-ribosylation factor GTPase activating protein 3 protein-coding common_peak2_77_77_-0.286083421752925_6.14236050798579_0.561668673126632-4 chr18 12128821 12129499 + 0.561668673126632 NA intron (NM_024182, intron 1 of 12) CpG 310 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding common_peak1_77_77_-0.286083421752925_6.14236050798579_0.561668673126632-2 chr2 26139644 26140463 + 0.561668673126632 NA promoter-TSS (NM_001256522) promoter-TSS (NM_001256522) 453 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak2_77_77_-0.286083421752925_6.14236050798579_0.561668673126632-3 chr12 111446732 111448320 + 0.561668673126632 NA intron (NM_009396, intron 3 of 11) intron (NM_009396, intron 3 of 11) 4865 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_136_129_-0.216152238912675_6.91429169357212_0.561642857803582-2 chr2 152669550 152670787 + 0.561642857803582 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 707 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak1_136_129_-0.216152238912675_6.91429169357212_0.561642857803582-3 chr9 37488427 37490006 + 0.561642857803582 NA promoter-TSS (NM_146222) promoter-TSS (NM_146222) -105 NM_146222 235184 Mm.127892 NM_146222 ENSMUSG00000042138 Msantd2 2810450G17Rik|9530092B10Rik Myb/SANT-like DNA-binding domain containing 2 protein-coding common_peak1_136_129_-0.216152238912675_6.91429169357212_0.561642857803582 chr17 35051121 35052390 + 0.561642857803582 NA intron (NM_033444, intron 1 of 5) intron (NM_033444, intron 1 of 5) 1512 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak2_120_115_-0.229670234151247_6.74314587805195_0.56103747685196 chr15 38518391 38519197 + 0.56103747685196 NA intron (NM_001301688, intron 1 of 11) CpG 472 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding common_peak2_120_115_-0.229670234151247_6.74314587805195_0.56103747685196-2 chr17 46247567 46248640 + 0.56103747685196 NA promoter-TSS (NM_145353) promoter-TSS (NM_145353) 23 NM_145353 28064 Mm.248769 NM_145353 ENSMUSG00000071074 Yipf3 C6orf109|D17Wsu94e|KLIP1 Yip1 domain family, member 3 protein-coding common_peak1_140_99_0.203585736181541_6.74564905786549_0.561037476851935-2 chr9 63978321 63980354 + 0.561037476851935 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 42722 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_140_99_0.203585736181541_6.74564905786549_0.561037476851935 chr11 86646746 86648146 + 0.561037476851935 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 23829 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak2_140_99_0.203585736181541_6.74564905786549_0.561037476851935-2 chr3 57511459 57513122 + 0.561037476851935 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 63586 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_140_99_0.203585736181541_6.74564905786549_0.561037476851935 chr2 30472201 30473232 + 0.561037476851935 NA TTS (NM_030244) TTS (NM_030244) 1483 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_108_75_0.230767371684861_6.36331119928602_0.560863550509137-2 chr2 6212367 6213653 + 0.560863550509137 NA promoter-TSS (NM_024208) promoter-TSS (NM_024208) -16 NM_024208 67856 Mm.38342 NM_024208 ENSMUSG00000039063 Echdc3 2310005D12Rik|AI662097 enoyl Coenzyme A hydratase domain containing 3 protein-coding common_peak2_108_75_0.230767371684861_6.36331119928602_0.560863550509137 chr15 83410340 83411091 + 0.560863550509137 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 22135 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_108_75_0.230767371684861_6.36331119928602_0.560863550509137 chr11 51584028 51585446 + 0.560863550509137 NA promoter-TSS (NM_028398) promoter-TSS (NM_028398) -20 NM_028398 72947 Mm.256875 NM_028398 ENSMUSG00000020359 Phykpl 2900006B13Rik|Agxt2l2 5-phosphohydroxy-L-lysine phospholyase protein-coding common_peak2_108_75_0.230767371684861_6.36331119928602_0.560863550509137-2 chr4 56946503 56947384 + 0.560863550509137 NA exon (NM_175518, exon 1 of 18) exon (NM_175518, exon 1 of 18) 486 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding common_peak1_108_75_0.230767371684861_6.36331119928602_0.560863550509137-3 chr4 56946494 56947387 + 0.560863550509137 NA exon (NM_175518, exon 1 of 18) exon (NM_175518, exon 1 of 18) 489 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding common_peak1_108_75_0.230767371684861_6.36331119928602_0.560863550509137-4 chr9 56089575 56090808 + 0.560863550509137 NA 5' UTR (NM_011193, exon 1 of 15) 5' UTR (NM_011193, exon 1 of 15) 215 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_91_89_-0.256054774106664_6.36382570927634_0.560863550509137 chr13 108403568 108404926 + 0.560863550509137 NA Intergenic Intergenic 87910 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_91_89_-0.256054774106664_6.36382570927634_0.560863550509137 chr16 38087526 38088650 + 0.560863550509137 NA promoter-TSS (NM_019827) promoter-TSS (NM_019827) -913 NM_001347232 56637 Mm.394930 NM_019827 ENSMUSG00000022812 Gsk3b 7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3 glycogen synthase kinase 3 beta protein-coding common_peak1_44_47_-0.373594353294572_5.39816532407387_0.560152715697887-2 chr10 108537942 108538608 + 0.560152715697887 NA intron (NM_001358501, intron 9 of 10) intron (NM_001358501, intron 9 of 10) 161885 NM_203660 368203 Mm.452758 NM_203660 ENSMUSG00000112039 Gm5136 C6.1AL|EG368203 predicted gene 5136 protein-coding common_peak1_56_37_0.302071543329016_5.39896328510809_0.560152715697887-5 chr8 8334515 8335059 + 0.560152715697887 NA Intergenic Intergenic 325986 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak1_56_37_0.302071543329016_5.39896328510809_0.560152715697887-2 chr19 8797877 8798482 + 0.560152715697887 NA intron (NM_026329, intron 2 of 7) intron (NM_026329, intron 2 of 7) 378 NM_026329 67710 Mm.22117 NM_026329 ENSMUSG00000071662 Polr2g 2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l polymerase (RNA) II (DNA directed) polypeptide G protein-coding unique_peak1_56_37_0.302071543329016_5.39896328510809_0.560152715697887 chr10 67607975 67608622 + 0.560152715697887 NA Intergenic Intergenic -36339 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak1_56_37_0.302071543329016_5.39896328510809_0.560152715697887-3 chr4 137486629 137487543 + 0.560152715697887 NA intron (NM_008305, intron 1 of 96) MIRb|SINE|MIR 18283 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_56_37_0.302071543329016_5.39896328510809_0.560152715697887-4 chr8 119437259 119437808 + 0.560152715697887 NA intron (NM_027950, intron 1 of 5) intron (NM_027950, intron 1 of 5) 371 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak1_44_47_-0.373594353294572_5.39816532407387_0.560152715697887 chr1 43259837 43260378 + 0.560152715697887 NA Intergenic Intergenic -63346 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_56_37_0.302071543329016_5.39896328510809_0.560152715697887-4 chr7 89561355 89561971 + 0.560152715697887 NA Intergenic Intergenic -34476 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak2_44_47_-0.373594353294572_5.39816532407387_0.560152715697887-5 chr6 134670409 134671326 + 0.560152715697887 NA intron (NM_001170479, intron 2 of 3) intron (NM_001170479, intron 2 of 3) 29927 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak2_56_37_0.302071543329016_5.39896328510809_0.560152715697887-2 chr3 95281314 95281696 + 0.560152715697887 NA intron (NM_173347, intron 1 of 7) CpG 571 NM_173347 229589 Mm.14155 NM_173347 ENSMUSG00000015711 Prune1 9230112O05Rik|C130058A12|DRES-17|HTCD37|PRUNEM1|Prune|Prune-M1 prune exopolyphosphatase protein-coding common_peak2_56_37_0.302071543329016_5.39896328510809_0.560152715697887 chr19 53410257 53410736 + 0.560152715697887 NA Intergenic Intergenic -19862 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_44_47_-0.373594353294572_5.39816532407387_0.560152715697887-2 chr1 177013551 177014286 + 0.560152715697887 NA intron (NM_001357390, intron 18 of 18) intron (NM_001357390, intron 18 of 18) -177785 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak1_44_47_-0.373594353294572_5.39816532407387_0.560152715697887-3 chr8 45000993 45001495 + 0.560152715697887 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 51036 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_44_47_-0.373594353294572_5.39816532407387_0.560152715697887-3 chr12 76765559 76766028 + 0.560152715697887 NA intron (NR_154884, intron 1 of 2) intron (NR_154884, intron 1 of 2) 255 NM_206534 211151 Mm.80970 NM_206534 ENSMUSG00000090258 Churc1 1700030P15Rik|My015|chch churchill domain containing 1 protein-coding common_peak2_44_47_-0.373594353294572_5.39816532407387_0.560152715697887-4 chr4 88756938 88757576 + 0.560152715697887 NA promoter-TSS (NM_001243150) promoter-TSS (NM_001243150) -587 NM_001243150 100041062 Mm.489587 NM_001243150 Gm13286 - predicted gene 13286 protein-coding common_peak2_56_37_0.302071543329016_5.39896328510809_0.560152715697887-3 chr3 95871137 95871813 + 0.560152715697887 NA promoter-TSS (NR_040446) promoter-TSS (NR_040446) 39 NM_078479 66292 Mm.24108 NM_078479 ENSMUSG00000054312 Mrps21 1810031B19Rik|S21mt mitochondrial ribosomal protein S21 protein-coding common_peak2_44_47_-0.373594353294572_5.39816532407387_0.560152715697887 chr1 75392458 75393117 + 0.560152715697887 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) 7177 NM_001085370 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_56_37_0.302071543329016_5.39896328510809_0.560152715697887 chr11 86576701 86577154 + 0.560152715697887 NA Intergenic Intergenic 7231 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_235_214_-0.162901723413269_7.66674198788283_0.560022010707829 chr11 60113335 60116190 + 0.560022010707829 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 9749 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_196_142_0.166667025296286_7.24320484942653_0.559913189173743 chr3 152395611 152397669 + 0.559913189173743 NA promoter-TSS (NM_001287139) promoter-TSS (NM_001287139) -44 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak1_124_87_0.215469162695646_6.56716619998512_0.559810684948594 chr10 62791453 62792264 + 0.559810684948594 NA intron (NM_026201, intron 1 of 24) CpG 510 NM_026201 67500 Mm.196371 NM_026201 ENSMUSG00000020074 Ccar1 2610511G16Rik|9430036H15Rik|Carp1 cell division cycle and apoptosis regulator 1 protein-coding common_peak2_105_102_-0.247785451486602_6.56260780143992_0.559810684948594 chr7 132315707 132317179 + 0.559810684948594 NA non-coding (NR_028578, exon 1 of 1) non-coding (NR_028578, exon 1 of 1) 583 NM_001360768 77590 Mm.213582 NM_029935 ENSMUSG00000030930 Chst15 4631426J05Rik|BRAG|GalNAc4S-6ST|GalNAcS-6ST|MAd5|mKIAA0598 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein-coding common_peak1_105_102_-0.247785451486602_6.56260780143992_0.559810684948594 chr5 125393343 125394127 + 0.559810684948594 NA Intergenic Intergenic -3718 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_137_130_-0.216789077086985_6.92502846299396_0.55949437113674-2 chr15 102073948 102074638 + 0.55949437113674 NA intron (NM_145625, intron 1 of 14) CpG 520 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak2_137_130_-0.216789077086985_6.92502846299396_0.55949437113674 chr13 98354286 98356291 + 0.55949437113674 NA exon (NM_008242, exon 1 of 1) exon (NM_008242, exon 1 of 1) 1043 NM_008242 15229 Mm.347441 NM_008242 ENSMUSG00000078302 Foxd1 AI385632|BF-2|FREAC4|Hfh10|Hfhbf2 forkhead box D1 protein-coding unique_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-2 chr12 113142833 113143381 + 0.559339468345748 NA intron (NM_001347443, intron 1 of 6) intron (NM_001347443, intron 1 of 6) 2502 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-9 chr8 36720566 36720926 + 0.559339468345748 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 12308 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-17 chr8 54530421 54530909 + 0.559339468345748 NA promoter-TSS (NM_029701) promoter-TSS (NM_029701) -667 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-3 chr15 64364670 64365029 + 0.559339468345748 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 18070 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-14 chr6 82771988 82772326 + 0.559339468345748 NA intron (NM_013820, intron 1 of 17) intron (NM_013820, intron 1 of 17) 2297 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748 chr11 82012169 82012663 + 0.559339468345748 NA Intergenic L2b|LINE|L2 -23161 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-5 chr16 44494806 44495201 + 0.559339468345748 NA intron (NM_172506, intron 8 of 18) intron (NM_172506, intron 8 of 18) 63126 NR_037242 100526478 NR_037242 ENSMUSG00000093046 Mir3081 mir-3081|mmu-mir-3081 microRNA 3081 ncRNA unique_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-2 chr13 34725787 34726199 + 0.559339468345748 NA Intergenic Intergenic -13649 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748 chr1 71754804 71755365 + 0.559339468345748 NA Intergenic Intergenic 101749 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-6 chr2 180223214 180223740 + 0.559339468345748 NA intron (NM_001081171, intron 1 of 78) intron (NM_001081171, intron 1 of 78) 2382 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-4 chr16 16224728 16225174 + 0.559339468345748 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 11606 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-10 chr18 57878928 57879305 + 0.559339468345748 NA exon (NM_009194, exon 1 of 27) exon (NM_009194, exon 1 of 27) 438 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-4 chr4 59335969 59336458 + 0.559339468345748 NA intron (NM_001163288, intron 12 of 16) intron (NM_001163288, intron 12 of 16) 76162 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA unique_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748 chr1 11078769 11079238 + 0.559339468345748 NA intron (NM_029525, intron 4 of 39) intron (NM_029525, intron 4 of 39) 85538 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-4 chr12 31272621 31272946 + 0.559339468345748 NA intron (NM_008482, intron 4 of 32) intron (NM_008482, intron 4 of 32) 7489 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-3 chr15 64364783 64365069 + 0.559339468345748 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 17993 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_37_23_0.384200953823991_4.77706297763315_0.559339468345748 chr14 45492544 45492847 + 0.559339468345748 NA intron (NM_146054, intron 3 of 14) intron (NM_146054, intron 3 of 14) 37370 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748 chr14 30716209 30716736 + 0.559339468345748 NA intron (NM_001166532, intron 1 of 20) CpG 857 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak2_37_23_0.384200953823991_4.77706297763315_0.559339468345748-2 chr16 21204806 21205296 + 0.559339468345748 NA 5' UTR (NM_010143, exon 1 of 16) 5' UTR (NM_010143, exon 1 of 16) 256 NM_010143 13845 Mm.6972 NM_010143 ENSMUSG00000005958 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-15 chr7 133088677 133089011 + 0.559339468345748 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -6984 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-7 chr17 25013686 25014260 + 0.559339468345748 NA exon (NM_020608, exon 2 of 21) exon (NM_020608, exon 2 of 21) 1257 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-6 chr5 115632007 115632729 + 0.559339468345748 NA promoter-TSS (NR_027810) promoter-TSS (NR_027810) 381 NM_198163 77407 Mm.27553 NM_198163 ENSMUSG00000029518 Rab35 9530019H02Rik|AU040256|H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-12 chr5 64850353 64850654 + 0.559339468345748 NA Intergenic Intergenic 46980 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-7 chr2 29827400 29827764 + 0.559339468345748 NA intron (NM_026615, intron 1 of 4) CpG 193 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-13 chr9 98433296 98433636 + 0.559339468345748 NA intron (NM_011254, intron 2 of 3) intron (NM_011254, intron 2 of 3) 10505 NM_011254 19659 Mm.279741 NM_011254 ENSMUSG00000046402 Rbp1 CRBPI|Crbp|Rbp-1 retinol binding protein 1, cellular protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-3 chr11 59336092 59336670 + 0.559339468345748 NA Intergenic Intergenic 29451 NM_139298 216795 Mm.218794 NM_139298 ENSMUSG00000000126 Wnt9a Wnt14 wingless-type MMTV integration site family, member 9A protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-3 chr15 66817350 66817913 + 0.559339468345748 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 14198 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-3 chr14 30903290 30903717 + 0.559339468345748 NA Intergenic Intergenic 17027 NM_001289632 16427 Mm.34819 NM_018746 ENSMUSG00000021922 Itih4 ITI-HC4|Itih-4|PK-120 inter alpha-trypsin inhibitor, heavy chain 4 protein-coding common_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-2 chr13 111805226 111806049 + 0.559339468345748 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 3356 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-2 chr11 5856296 5856703 + 0.559339468345748 NA Intergenic Intergenic -5367 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-2 chr4 155233289 155233967 + 0.559339468345748 NA Intergenic Intergenic -11093 NM_001357191 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-6 chr16 45893345 45893611 + 0.559339468345748 NA Intergenic Intergenic -48727 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-13 chr5 140705320 140706016 + 0.559339468345748 NA intron (NM_001276287, intron 1 of 13) intron (NM_001276287, intron 1 of 13) 602 NM_001276287 231841 Mm.271932 NM_172724 ENSMUSG00000000148 Brat1 AA881470|Baat1 BRCA1-associated ATM activator 1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-8 chr17 80728329 80728609 + 0.559339468345748 NA promoter-TSS (NM_001290345) promoter-TSS (NM_001290345) -444 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-5 chr17 56074757 56075116 + 0.559339468345748 NA 5' UTR (NM_024432, exon 2 of 12) 5' UTR (NM_024432, exon 2 of 12) 4397 NM_024432 66530 Mm.28000 NM_024432 ENSMUSG00000019578 Ubxn6 1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2 UBX domain protein 6 protein-coding common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-5 chr3 27616566 27617049 + 0.559339468345748 NA intron (NM_001356953, intron 4 of 26) intron (NM_001356953, intron 4 of 26) -31812 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748 chr1 89265543 89265869 + 0.559339468345748 NA Intergenic Intergenic 140427 NR_040482 77331 Mm.374962 NR_040482 ENSMUSG00000099938 C030007H22Rik - RIKEN cDNA C030007H22 gene ncRNA common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-12 chr9 78022563 78022869 + 0.559339468345748 NA Intergenic Intergenic -29242 NM_008103 14531 Mm.1400 NM_008103 ENSMUSG00000023333 Gcm1 GCMa|Gcm-rs2|Gcm1-rs1|glide glial cells missing homolog 1 protein-coding unique_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-5 chr5 144897941 144898278 + 0.559339468345748 NA intron (NM_001038627, intron 5 of 17) intron (NM_001038627, intron 5 of 17) -1293 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748 chr10 82813549 82814043 + 0.559339468345748 NA intron (NR_038042, intron 1 of 2) B3|SINE|B2 1673 NR_038042 70003 Mm.48789 NR_038042 ENSMUSG00000056821 1700028I16Rik - RIKEN cDNA 1700028I16 gene ncRNA common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-2 chr10 99062962 99063439 + 0.559339468345748 NA Intergenic Intergenic -43882 NM_027740 382406 Mm.440656 NM_027740 ENSMUSG00000019952 Poc1b 4933430F16Rik|Wdr51b POC1 centriolar protein B protein-coding common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-8 chr9 95857743 95858145 + 0.559339468345748 NA promoter-TSS (NR_073361) promoter-TSS (NR_073361) -62 NM_001271569 73410 Mm.443314 NM_028533 ENSMUSG00000096655 1700065D16Rik - RIKEN cDNA 1700065D16 gene protein-coding unique_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-3 chr5 31626623 31627229 + 0.559339468345748 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 12975 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-9 chr4 133595199 133595542 + 0.559339468345748 NA Intergenic Intergenic 6798 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-5 chr15 102624633 102624860 + 0.559339468345748 NA intron (NM_001310067, intron 1 of 11) intron (NM_001310067, intron 1 of 11) 718 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000099083 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-11 chr9 54586595 54586970 + 0.559339468345748 NA intron (NM_029573, intron 1 of 10) CpG 271 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748 chr10 75898504 75898925 + 0.559339468345748 NA intron (NM_011418, intron 7 of 8) intron (NM_011418, intron 7 of 8) 5316 NM_001358985 70377 Mm.275878 NM_024440 ENSMUSG00000009092 Derl3 1810006I20Rik|1810063P04Rik|IZP6|derlin-3 Der1-like domain family, member 3 protein-coding unique_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-6 chr9 102994201 102995119 + 0.559339468345748 NA Intergenic Intergenic -13829 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-18 chrX 159808830 159809314 + 0.559339468345748 NA intron (NM_021389, intron 3 of 16) intron (NM_021389, intron 3 of 16) -31396 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-9 chr18 33463253 33463676 + 0.559339468345748 NA promoter-TSS (NR_045415) promoter-TSS (NR_045415) 170 NM_001267717 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding unique_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-3 chr15 62261350 62262075 + 0.559339468345748 NA Intergenic Intergenic -42261 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-7 chr9 56994446 56994781 + 0.559339468345748 NA promoter-TSS (NM_019651) promoter-TSS (NM_019651) -355 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-10 chr7 133088670 133089009 + 0.559339468345748 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -6979 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_36_23_0.345998240336286_4.7579616208893_0.559339468345748-8 chr2 34527930 34528503 + 0.559339468345748 NA intron (NM_001290625, intron 6 of 11) intron (NM_001290625, intron 6 of 11) 121365 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-6 chr16 85801882 85802444 + 0.559339468345748 NA exon (NM_009621, exon 1 of 9) exon (NM_009621, exon 1 of 9) 950 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-11 chr2 34527913 34528508 + 0.559339468345748 NA intron (NM_001290625, intron 6 of 11) intron (NM_001290625, intron 6 of 11) 121359 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-7 chr2 180443405 180443872 + 0.559339468345748 NA Intergenic Intergenic -12607 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_37_23_0.384200953823991_4.77706297763315_0.559339468345748-4 chr18 60914851 60915335 + 0.559339468345748 NA intron (NM_001038499, intron 1 of 1) intron (NM_001038499, intron 1 of 1) 2853 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_37_23_0.384200953823991_4.77706297763315_0.559339468345748-4 chrX 12773669 12774027 + 0.559339468345748 NA intron (NR_045852, intron 2 of 4) intron (NR_045852, intron 2 of 4) 11570 NR_045852 552913 Mm.216846 NR_045852 ENSMUSG00000085891 Gm14634 - predicted gene 14634 ncRNA common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-2 chr15 58379408 58379623 + 0.559339468345748 NA intron (NM_027211, intron 1 of 8) intron (NM_027211, intron 1 of 8) 9759 NM_027211 69787 Mm.237985 NM_027211 Anxa13 1810034H17Rik|AV055219 annexin A13 protein-coding common_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-5 chr7 39544493 39544880 + 0.559339468345748 NA Intergenic CpG 26920 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding unique_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-4 chr3 85886791 85887305 + 0.559339468345748 NA intron (NM_177130, intron 1 of 1) intron (NM_177130, intron 1 of 1) 470 NM_177130 320302 Mm.482978 NM_177130 ENSMUSG00000031286 Glt28d2 4732486J07Rik|Glt28d1l glycosyltransferase 28 domain containing 2 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-4 chr16 43889907 43890216 + 0.559339468345748 NA promoter-TSS (NM_001356328) promoter-TSS (NM_001356328) 159 NM_027801 212153 Mm.209835 NM_027801 ENSMUSG00000022701 Ccdc191 2610015P09Rik|8430422M09Rik|AU040712 coiled-coil domain containing 191 protein-coding common_peak1_27_31_-0.468300906208075_4.76584954689596_0.559339468345748-8 chr6 54278850 54279182 + 0.559339468345748 NA intron (NM_001163640, intron 7 of 12) intron (NM_001163640, intron 7 of 12) 6194 NM_023543 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-2 chr14 99045686 99046113 + 0.559339468345748 NA promoter-TSS (NM_175265) promoter-TSS (NM_175265) 237 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding common_peak2_37_23_0.384200953823991_4.77706297763315_0.559339468345748-3 chr3 144578453 144578943 + 0.559339468345748 NA intron (NM_053102, intron 2 of 4) intron (NM_053102, intron 2 of 4) 8271 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_36_23_0.345998240336286_4.7579616208893_0.559339468345748-16 chr8 26823567 26824024 + 0.559339468345748 NA intron (NR_045904, intron 1 of 2) intron (NR_045904, intron 1 of 2) 628 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_27_31_-0.468300906208075_4.76584954689596_0.559339468345748 chr1 54830540 54830967 + 0.559339468345748 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 95634 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_240_175_0.155892407470993_7.53737782237279_0.559286425789933 chr15 39005593 39007247 + 0.559286425789933 NA promoter-TSS (NM_008056) promoter-TSS (NM_008056) 87 NM_008056 14368 Mm.4769 NM_008056 ENSMUSG00000022297 Fzd6 Fz6 frizzled class receptor 6 protein-coding common_peak1_264_193_0.151404152690124_7.67561491853219_0.558751206252824 chr9 110683366 110685977 + 0.558751206252824 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 28168 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_141_100_0.199354279381693_6.75788862244264_0.558625560805335-2 chr8 106059649 106060721 + 0.558625560805335 NA intron (NM_010901, intron 1 of 9) CpG 582 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_141_100_0.199354279381693_6.75788862244264_0.558625560805335 chr6 17463405 17465079 + 0.558625560805335 NA 5' UTR (NM_008591, exon 1 of 22) 5' UTR (NM_008591, exon 1 of 22) 285 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_219_159_0.162794247317088_7.40332521854591_0.558159148594897 chr7 112225924 112227630 + 0.558159148594897 NA intron (NM_001193305, intron 1 of 25) intron (NM_001193305, intron 1 of 25) 941 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_78_78_-0.286213081901827_6.16067420722619_0.558013209752558 chr17 25183848 25184405 + 0.558013209752558 NA promoter-TSS (NM_183150) promoter-TSS (NM_183150) -435 NM_183150 214489 Mm.274433 NM_183150 ENSMUSG00000067722 BC003965 Ccsmst1 cDNA sequence BC003965 protein-coding common_peak1_94_65_0.237371254367328_6.16307974654212_0.558013209752558-2 chr6 113739868 113740690 + 0.558013209752558 NA intron (NM_024206, intron 1 of 8) intron (NM_024206, intron 1 of 8) 402 NM_024206 110379 Mm.29296 NM_024206 ENSMUSG00000030298 Sec13 1110003H02Rik|Sec13l1|Sec13r SEC13 homolog, nuclear pore and COPII coat complex component protein-coding common_peak1_78_78_-0.286213081901827_6.16067420722619_0.558013209752558 chr2 33467937 33468588 + 0.558013209752558 NA intron (NM_001355611, intron 1 of 2) CpG 270 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak1_78_78_-0.286213081901827_6.16067420722619_0.558013209752558-2 chr4 106911551 106912633 + 0.558013209752558 NA intron (NM_198438, intron 1 of 16) CpG 622 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_94_65_0.237371254367328_6.16307974654212_0.558013209752558 chr2 144269801 144270894 + 0.558013209752558 NA promoter-TSS (NM_001289630) promoter-TSS (NM_001289630) 225 NM_024225 69178 Mm.273379 NM_024225 ENSMUSG00000027423 Snx5 0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e sorting nexin 5 protein-coding common_peak1_66_67_-0.305909823609952_5.93450792944536_0.557749827489198-2 chr8 95887536 95888316 + 0.557749827489198 NA intron (NM_010325, intron 1 of 9) intron (NM_010325, intron 1 of 9) 439 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding common_peak1_81_55_0.263604645542834_5.93915724482902_0.557749827489198 chr1 170175338 170176286 + 0.557749827489198 NA promoter-TSS (NM_001305045) promoter-TSS (NM_001305045) -848 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_81_55_0.263604645542834_5.93915724482902_0.557749827489198-2 chr10 117063361 117063763 + 0.557749827489198 NA promoter-TSS (NM_001358767) promoter-TSS (NM_001358767) -187 NM_001358767 12461 Mm.247788 NM_007636 ENSMUSG00000034024 Cct2 Cctb chaperonin containing Tcp1, subunit 2 (beta) protein-coding common_peak2_66_67_-0.305909823609952_5.93450792944536_0.557749827489198-2 chr12 3572500 3573375 + 0.557749827489198 NA promoter-TSS (NM_007886) promoter-TSS (NM_007886) -47 NM_007886 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak2_66_67_-0.305909823609952_5.93450792944536_0.557749827489198 chr11 31563637 31564124 + 0.557749827489198 NA Intergenic Intergenic 107982 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_81_55_0.263604645542834_5.93915724482902_0.557749827489198-4 chr19 4162511 4163516 + 0.557749827489198 NA intron (NR_153661, intron 1 of 14) intron (NR_153661, intron 1 of 14) 370 NR_153661 58988 Mm.271937 NM_021485 ENSMUSG00000024830 Rps6kb2 S6K-beta-2|S6K2 ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_66_67_-0.305909823609952_5.93450792944536_0.557749827489198-4 chr15 6411868 6412907 + 0.557749827489198 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 25639 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak1_66_67_-0.305909823609952_5.93450792944536_0.557749827489198 chr13 55714144 55714996 + 0.557749827489198 NA promoter-TSS (NM_175150) promoter-TSS (NM_175150) -80 NM_175150 69672 Mm.294457 NM_175150 ENSMUSG00000021497 Txndc15 2310047H23Rik|AI854086|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding common_peak2_81_55_0.263604645542834_5.93915724482902_0.557749827489198-2 chr15 85665471 85666115 + 0.557749827489198 NA Intergenic Intergenic -37980 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_81_55_0.263604645542834_5.93915724482902_0.557749827489198 chr15 62120416 62121200 + 0.557749827489198 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 81551 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_81_55_0.263604645542834_5.93915724482902_0.557749827489198-5 chr4 32520449 32521750 + 0.557749827489198 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 50563 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak2_66_67_-0.305909823609952_5.93450792944536_0.557749827489198-3 chr14 99324825 99325518 + 0.557749827489198 NA Intergenic Intergenic 26480 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_66_67_-0.305909823609952_5.93450792944536_0.557749827489198-3 chr9 122950366 122950969 + 0.557749827489198 NA promoter-TSS (NM_010620) promoter-TSS (NM_010620) 333 NM_025419 66202 Mm.268307 NM_025419 ENSMUSG00000032551 1110059G10Rik - RIKEN cDNA 1110059G10 gene protein-coding common_peak1_81_55_0.263604645542834_5.93915724482902_0.557749827489198-6 chr5 92933239 92934063 + 0.557749827489198 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 35658 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_66_67_-0.305909823609952_5.93450792944536_0.557749827489198-5 chr4 82504016 82504886 + 0.557749827489198 NA intron (NM_001286131, intron 1 of 9) CpG 1328 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak1_81_55_0.263604645542834_5.93915724482902_0.557749827489198-3 chr15 78807554 78808350 + 0.557749827489198 NA Intergenic Intergenic -4910 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak2_109_76_0.224990781082793_6.3792819312363_0.557725524115039 chr2 32712106 32713165 + 0.557725524115039 NA TTS (NR_037217) TTS (NR_037217) 149 NM_130860 107951 Mm.27557 NM_130860 ENSMUSG00000009555 Cdk9 PITALRE cyclin-dependent kinase 9 (CDC2-related kinase) protein-coding common_peak1_159_114_0.183041953307567_6.93701102759816_0.557381047291801 chr11 98960175 98962082 + 0.557381047291801 NA exon (NM_001176528, exon 1 of 8) exon (NM_001176528, exon 1 of 8) 657 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_159_114_0.183041953307567_6.93701102759816_0.557381047291801-2 chr19 32757609 32759277 + 0.557381047291801 NA 5' UTR (NM_008960, exon 1 of 9) 5' UTR (NM_008960, exon 1 of 9) 866 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak2_125_88_0.210581887707193_6.58102437481999_0.557095317016001 chr7 84521666 84523382 + 0.557095317016001 NA Intergenic Intergenic -6430 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_106_103_-0.248273681111933_6.57630287758512_0.557095317016001 chr13 28883971 28885328 + 0.557095317016001 NA intron (NR_045054, intron 1 of 7) intron (NR_045054, intron 1 of 7) 773 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak2_107_103_-0.234947846814177_6.582965794734_0.557095317016001 chr2 151542646 151543606 + 0.557095317016001 NA intron (NR_126058, intron 2 of 3) CpG-8654 643 NM_001302078 14225 Mm.278458 NM_008019 ENSMUSG00000032966 Fkbp1a FKBP12|Fkbp|Fkbp1 FK506 binding protein 1a protein-coding common_peak1_125_88_0.210581887707193_6.58102437481999_0.557095317016001 chr11 120235505 120237517 + 0.557095317016001 NA intron (NM_198423, intron 1 of 27) CpG 3564 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_106_103_-0.248273681111933_6.57630287758512_0.557095317016001-2 chr8 22652507 22654035 + 0.557095317016001 NA intron (NM_011130, intron 1 of 13) CpG-13889 166 NM_011130 18970 Mm.123211 NM_011130 ENSMUSG00000031536 Polb A430088C08Rik polymerase (DNA directed), beta protein-coding common_peak1_107_103_-0.234947846814177_6.582965794734_0.557095317016001 chr10 126979042 126980436 + 0.557095317016001 NA intron (NM_001113470, intron 1 of 7) CpG 1022 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381 chr12 55492178 55492571 + 0.556669751231381 NA exon (NM_010907, exon 1 of 6) exon (NM_010907, exon 1 of 6) 273 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-4 chr3 41183573 41184257 + 0.556669751231381 NA Intergenic Intergenic -100869 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-7 chr7 63939346 63939899 + 0.556669751231381 NA promoter-TSS (NM_021366) promoter-TSS (NM_021366) -707 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_46_30_0.319464992915179_5.11392880684446_0.556669751231381 chr10 128909009 128909642 + 0.556669751231381 NA promoter-TSS (NM_001282966) promoter-TSS (NM_001282966) -20 NM_001282966 12512 Mm.371552 NM_007653 ENSMUSG00000025351 Cd63 C75951|ME491|Tspan30 CD63 antigen protein-coding unique_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-2 chr3 127836855 127837416 + 0.556669751231381 NA intron (NM_145964, intron 1 of 9) CpG 388 NM_001346718 211556 Mm.403486 NM_145964 ENSMUSG00000074238 Ap1ar AA407621|C78909|Gadkin adaptor-related protein complex 1 associated regulatory protein protein-coding common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-2 chr14 28808538 28809334 + 0.556669751231381 NA Intergenic Intergenic -209272 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak2_46_30_0.319464992915179_5.11392880684446_0.556669751231381-2 chr9 67840383 67840828 + 0.556669751231381 NA intron (NM_177184, intron 1 of 84) CpG 209 NM_177184 320528 Mm.241454 NM_177184 ENSMUSG00000035284 Vps13c AI552542|AV026040|C230055H22Rik|W51662|chorein vacuolar protein sorting 13C protein-coding common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-5 chr3 121602183 121602724 + 0.556669751231381 NA Intergenic Intergenic 41032 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-3 chr19 46003594 46004104 + 0.556669751231381 NA exon (NM_176785, exon 1 of 1) exon (NM_176785, exon 1 of 1) 371 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 protein-coding common_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381-6 chr6 120916107 120916898 + 0.556669751231381 NA intron (NM_007544, intron 1 of 5) CpG 322 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding unique_peak1_46_30_0.319464992915179_5.11392880684446_0.556669751231381 chr11 49846730 49847359 + 0.556669751231381 NA intron (NM_016961, intron 1 of 11) CpG 293 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak1_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-4 chr2 27843211 27843977 + 0.556669751231374 NA Intergenic Intergenic -42831 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-4 chr15 5196271 5196691 + 0.556669751231374 NA intron (NM_001355621, intron 3 of 5) intron (NM_001355621, intron 3 of 5) 10921 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak1_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-3 chr17 42876145 42876510 + 0.556669751231374 NA promoter-TSS (NM_009847) promoter-TSS (NM_009847) 97 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak1_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-6 chr5 140704450 140704742 + 0.556669751231374 NA promoter-TSS (NM_001276287) promoter-TSS (NM_001276287) -415 NM_181066 231841 Mm.271932 NM_172724 ENSMUSG00000000148 Brat1 AA881470|Baat1 BRCA1-associated ATM activator 1 protein-coding common_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374 chr1 36243784 36244236 + 0.556669751231374 NA intron (NM_198899, intron 1 of 40) CpG 292 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding common_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-2 chr10 80261320 80261767 + 0.556669751231374 NA promoter-TSS (NM_001347119) promoter-TSS (NM_001347119) -531 NM_010255 14431 Mm.7329 NM_010255 ENSMUSG00000020150 Gamt AA571402|Spintz1 guanidinoacetate methyltransferase protein-coding common_peak1_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-2 chr13 40860016 40860546 + 0.556669751231374 NA 5' UTR (NM_023887, exon 1 of 3) 5' UTR (NM_023887, exon 1 of 3) 513 NM_023887 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding unique_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374 chr5 114657580 114658338 + 0.556669751231374 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 462 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-5 chr16 87382401 87383095 + 0.556669751231374 NA exon (NM_001081068, exon 26 of 30) exon (NM_001081068, exon 26 of 30) 28563 NM_026366 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding common_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-3 chr12 56345362 56346069 + 0.556669751231374 NA exon (NM_145442, exon 1 of 9) exon (NM_145442, exon 1 of 9) 179 NM_145442 217588 Mm.25656 NM_145442 ENSMUSG00000021028 Mbip 4933408E06Rik MAP3K12 binding inhibitory protein 1 protein-coding common_peak1_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-5 chr2 30237086 30237536 + 0.556669751231374 NA promoter-TSS (NM_177725) promoter-TSS (NM_177725) 320 NR_028299 67350 Mm.402683 NR_028299 1700084E18Rik - RIKEN cDNA 1700084E18 gene ncRNA common_peak2_35_39_-0.430216846214658_5.10681967178003_0.556669751231374-6 chr5 137107272 137107946 + 0.556669751231374 NA Intergenic PB1D7|SINE|Alu 8598 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_35_39_-0.430216846214658_5.10681967178003_0.556669751231374 chr1 88533899 88534209 + 0.556669751231374 NA Intergenic Intergenic -17463 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak2_69_46_0.289712161294921_5.6994449323251_0.556612435105728-3 chr5 137045305 137046007 + 0.556612435105728 NA intron (NM_007457, intron 1 of 4) intron (NM_007457, intron 1 of 4) 452 NM_007457 11769 Mm.833 NM_007457 ENSMUSG00000004849 Ap1s1 AP19 adaptor protein complex AP-1, sigma 1 protein-coding common_peak2_55_57_-0.333336880908892_5.69131255467313_0.556612435105728-3 chr17 28257248 28258097 + 0.556612435105728 NA intron (NM_011145, intron 2 of 7) B1_Mur4|SINE|Alu -14036 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak1_55_57_-0.333336880908892_5.69131255467313_0.556612435105728 chr3 122419889 122420703 + 0.556612435105728 NA intron (NM_013867, intron 1 of 11) intron (NM_013867, intron 1 of 11) 539 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_55_57_-0.333336880908892_5.69131255467313_0.556612435105728-4 chr7 15922136 15922820 + 0.556612435105728 NA promoter-TSS (NM_009156) promoter-TSS (NM_009156) -107 NM_009156 20364 Mm.42829 NM_009156 ENSMUSG00000041571 Selenow Sepw1|selW selenoprotein W protein-coding common_peak1_68_46_0.269100052346071_5.68913887785067_0.556612435105728-2 chr4 143294539 143295042 + 0.556612435105728 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 4774 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding common_peak2_69_46_0.289712161294921_5.6994449323251_0.556612435105728-2 chr17 24454506 24455186 + 0.556612435105728 NA intron (NR_125990, intron 1 of 13) CpG 546 NM_001301784 13560 Mm.163132 NM_007893 ENSMUSG00000024137 E4f1 p120E4F|phi-AP3 E4F transcription factor 1 protein-coding unique_peak1_69_46_0.289712161294921_5.6994449323251_0.556612435105728 chr19 42779531 42780436 + 0.556612435105728 NA promoter-TSS (NM_001346703) promoter-TSS (NM_001346703) -5 NM_019424 192236 Mm.218381 NM_019424 ENSMUSG00000025188 Hps1 6030422N11Rik|BB405864|Gm21361|Hps|ep HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding unique_peak1_69_46_0.289712161294921_5.6994449323251_0.556612435105728-2 chr8 26830752 26831775 + 0.556612435105728 NA Intergenic Intergenic -6840 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_69_46_0.289712161294921_5.6994449323251_0.556612435105728 chr11 49711983 49712672 + 0.556612435105728 NA intron (NM_212484, intron 1 of 11) CpG 395 NM_212484 104625 Mm.247113 NM_212484 ENSMUSG00000020362 Cnot6 CCR4 CCR4-NOT transcription complex, subunit 6 protein-coding common_peak2_55_57_-0.333336880908892_5.69131255467313_0.556612435105728-2 chr16 34572337 34573432 + 0.556612435105728 NA Intergenic CpG -58857 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak1_68_46_0.269100052346071_5.68913887785067_0.556612435105728-3 chr8 84191657 84192102 + 0.556612435105728 NA Intergenic Intergenic -12918 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak2_55_57_-0.333336880908892_5.69131255467313_0.556612435105728-5 chr8 60773727 60774417 + 0.556612435105728 NA Intergenic Intergenic -116321 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak1_68_46_0.269100052346071_5.68913887785067_0.556612435105728 chr3 126693044 126693734 + 0.556612435105728 NA intron (NM_001025438, intron 3 of 18) intron (NM_001025438, intron 3 of 18) 96438 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_55_57_-0.333336880908892_5.69131255467313_0.556612435105728 chr11 95078362 95079028 + 0.556612435105728 NA Intergenic Intergenic -1884 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_69_46_0.289712161294921_5.6994449323251_0.556612435105728 chr9 100644077 100644670 + 0.556612435105728 NA intron (NM_009282, intron 1 of 33) CpG 925 NM_001357265 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding common_peak2_175_163_-0.192486561167511_7.26130872403433_0.556535772571193 chr17 80727055 80728890 + 0.556535772571193 NA promoter-TSS (NM_001290345) promoter-TSS (NM_001290345) 53 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_175_163_-0.192486561167511_7.26130872403433_0.556535772571193-2 chr8 79028485 79030544 + 0.556535772571193 NA intron (NM_001294279, intron 1 of 14) CpG 1077 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak1_216_198_-0.171571010989981_7.55083911504866_0.556528789585259 chr4 120567854 120571127 + 0.556528789585259 NA promoter-TSS (NM_001355491) promoter-TSS (NM_001355491) -31 NM_001355491 51797 Mm.1815 NM_016748 ENSMUSG00000028633 Ctps Ctps1 cytidine 5'-triphosphate synthase protein-coding common_peak1_242_177_0.151429644815427_7.55144825337411_0.556528789585259 chr9 62810466 62812680 + 0.556528789585259 NA promoter-TSS (NM_010193) promoter-TSS (NM_010193) 75 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding common_peak2_142_101_0.195193211289638_6.77002194761631_0.556258020955848 chr2 125122451 125123964 + 0.556258020955848 NA intron (NM_001162418, intron 1 of 14) CpG 453 NM_001162417 17876 Mm.18535 NM_010852 ENSMUSG00000027201 Myef2 9430071B01|mKIAA1341 myelin basic protein expression factor 2, repressor protein-coding common_peak2_122_117_-0.230847879533949_6.76721910959487_0.556258020955823 chr8 105937189 105938154 + 0.556258020955823 NA intron (NM_013640, intron 2 of 7) intron (NM_013640, intron 2 of 7) 721 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak1_123_117_-0.219248489382304_6.77301880467069_0.556258020955823-2 chr1 85793323 85794412 + 0.556258020955823 NA promoter-TSS (NM_001355047) promoter-TSS (NM_001355047) -150 NM_001355047 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_123_117_-0.219248489382304_6.77301880467069_0.556258020955823-3 chr10 79926778 79928265 + 0.556258020955823 NA intron (NM_001288625, intron 1 of 8) CpG 180 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak1_123_117_-0.219248489382304_6.77301880467069_0.556258020955823 chr1 39901043 39902190 + 0.556258020955823 NA intron (NM_001252202, intron 2 of 29) intron (NM_001252202, intron 2 of 29) 703 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak2_239_217_-0.15881671829753_7.68877596562816_0.556246664394647 chr2 156720358 156722394 + 0.556246664394647 NA promoter-TSS (NR_040505) promoter-TSS (NR_040505) 97 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak1_140_132_-0.207840509544925_6.95136218072873_0.555302029367416-2 chr8 106058397 106059377 + 0.555302029367416 NA promoter-TSS (NM_010901) promoter-TSS (NM_010901) -716 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_161_115_0.188346478426798_6.95215423434097_0.555302029367416 chr11 93955043 93956714 + 0.555302029367416 NA promoter-TSS (NM_001077529) promoter-TSS (NM_001077529) -95 NM_001077529 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding common_peak1_140_132_-0.207840509544925_6.95136218072873_0.555302029367416 chr1 156222690 156223942 + 0.555302029367416 NA Intergenic Intergenic -18290 NM_177838 329274 Mm.150857 NM_177838 ENSMUSG00000015484 Fam163a A230106N23Rik family with sequence similarity 163, member A protein-coding common_peak1_243_178_0.149230332892132_7.55843094371032_0.555171949915598 chr15 58887954 58890143 + 0.555171949915598 NA promoter-TSS (NM_175226) promoter-TSS (NM_175226) -181 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding common_peak2_110_77_0.219339144849404_6.39507179128695_0.554662476768468-2 chr3 30602375 30603169 + 0.554662476768468 NA intron (NM_001289621, intron 1 of 6) CpG 685 NM_001289622 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding common_peak2_110_77_0.219339144849404_6.39507179128695_0.554662476768468 chr15 94589253 94589835 + 0.554662476768468 NA intron (NM_008971, intron 1 of 8) CpG 280 NM_008971 19230 Mm.490250 NM_008971 ENSMUSG00000022451 Twf1 A6|Ptk9|twinfilin twinfilin actin binding protein 1 protein-coding common_peak2_79_79_-0.286341111062177_6.17875753935627_0.554459000578111 chr16 36071251 36071983 + 0.554459000578111 NA promoter-TSS (NM_027342) promoter-TSS (NM_027342) -43 NM_198645 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak1_80_79_-0.268545641759749_6.18765527400749_0.554459000578111 chr5 93131859 93132737 + 0.554459000578111 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 38882 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_80_79_-0.268545641759749_6.18765527400749_0.554459000578111-3 chr5 31179809 31180680 + 0.554459000578111 NA promoter-TSS (NM_027901) promoter-TSS (NM_027901) -100 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000106864 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding common_peak1_95_66_0.23067649684099_6.18142743887827_0.554459000578111 chr1 93445005 93446001 + 0.554459000578111 NA intron (NM_133808, intron 1 of 27) CpG 198 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak2_80_79_-0.268545641759749_6.18765527400749_0.554459000578111-2 chr3 84319875 84320937 + 0.554459000578111 NA Intergenic B2_Mm2|SINE|B2 -15631 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_79_79_-0.286341111062177_6.17875753935627_0.554459000578111-3 chr8 80857722 80858635 + 0.554459000578111 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 22301 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak2_80_79_-0.268545641759749_6.18765527400749_0.554459000578111 chr15 76350187 76351022 + 0.554459000578111 NA promoter-TSS (NM_001164608) promoter-TSS (NM_001164608) 506 NM_025340 106025 Mm.41463 NM_025340 ENSMUSG00000022552 Sharpin 0610041B22Rik|AW121341|RBCKL1|SIPL1|cpdm SHANK-associated RH domain interacting protein protein-coding common_peak1_79_79_-0.286341111062177_6.17875753935627_0.554459000578111 chr13 52981297 52982389 + 0.554459000578111 NA promoter-TSS (NM_017373) promoter-TSS (NM_017373) -804 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_79_79_-0.286341111062177_6.17875753935627_0.554459000578111-2 chr2 140100318 140101675 + 0.554459000578111 NA Intergenic Intergenic -34191 NR_110351 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak2_96_66_0.245521363953306_6.18884987243442_0.554459000578111 chr10 127311310 127312067 + 0.554459000578111 NA promoter-TSS (NM_001171582) promoter-TSS (NM_001171582) 98 NM_001003913 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding common_peak1_80_79_-0.268545641759749_6.18765527400749_0.554459000578111-2 chr9 121719423 121720148 + 0.554459000578111 NA intron (NM_010918, intron 2 of 16) CpG-15515 604 NM_010918 18087 Mm.32842 NM_010918 ENSMUSG00000032525 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence protein-coding common_peak1_126_89_0.205786525244241_6.5947463589518_0.554436398782392 chr17 21962189 21963414 + 0.554436398782392 NA promoter-TSS (NM_001199048) promoter-TSS (NM_001199048) 242 NM_001025373 74670 Mm.26540 NM_001025373 ENSMUSG00000053347 Zfp943 4930432O21Rik zinc finger prtoein 943 protein-coding common_peak2_108_104_-0.235550632537676_6.59647020139728_0.554436398782368 chr1 92933756 92935233 + 0.554436398782368 NA promoter-TSS (NM_011796) promoter-TSS (NM_011796) 86 NM_011796 23830 Mm.294315 NM_011796 ENSMUSG00000026270 Capn10 AW049679|Capn8|mKIAA1845 calpain 10 protein-coding common_peak2_108_104_-0.235550632537676_6.59647020139728_0.554436398782368-2 chr16 96081675 96082528 + 0.554436398782368 NA intron (NM_145125, intron 2 of 41) CpG-5898 327 NM_001103179 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak2_158_148_-0.19961784253809_7.11935959919312_0.554285203367993 chr11 93885226 93886612 + 0.554285203367993 NA promoter-TSS (NM_134012) promoter-TSS (NM_134012) -153 NM_001013375 217109 Mm.379350 NM_001013375 ENSMUSG00000054079 Utp18 6230425C22Rik|6430513M13|Wdr50 UTP18 small subunit processome component protein-coding common_peak1_180_130_0.171771588520676_7.11930879579779_0.554285203367993 chr10 59577451 59579241 + 0.554285203367993 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 38346 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_340_303_-0.135397595084783_8.18022871590119_0.554203681319971 chr1 132344473 132347351 + 0.554203681319971 NA Intergenic Intergenic 22036 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_57_38_0.289510802515018_5.43015762011976_0.554098881286537-2 chr14 54108133 54108742 + 0.554098881286537 NA Intergenic MIRc|SINE|MIR 145492 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-2 chr11 120572151 120572900 + 0.554098881286537 NA intron (NM_011032, intron 1 of 10) CpG 728 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-5 chr17 34118641 34119240 + 0.554098881286537 NA non-coding (NR_037970, exon 1 of 13) non-coding (NR_037970, exon 1 of 13) 960 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-5 chr2 165992374 165993154 + 0.554098881286537 NA intron (NM_008679, intron 1 of 22) CpG 127 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-8 chr8 73319831 73320405 + 0.554098881286537 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 33422 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding unique_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537 chr12 27491951 27492955 + 0.554098881286537 NA Intergenic Intergenic -149735 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_58_38_0.313998866460431_5.44240165209246_0.554098881286537-3 chr9 66240944 66241521 + 0.554098881286537 NA intron (NM_010019, intron 4 of 11) intron (NM_010019, intron 4 of 11) 83006 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-3 chr12 77094993 77096119 + 0.554098881286537 NA Intergenic MamGypLTR1a|LTR|Gypsy -133308 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-2 chr13 110912100 110912775 + 0.554098881286537 NA Intergenic B2_Mm2|SINE|B2 -8591 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537 chr11 88550593 88551565 + 0.554098881286537 NA intron (NM_054043, intron 6 of 13) (CAG)n|Simple_repeat|Simple_repeat -68172 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-3 chr17 3336500 3337334 + 0.554098881286537 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) 10344 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_57_38_0.289510802515018_5.43015762011976_0.554098881286537-3 chr5 142629794 142630299 + 0.554098881286537 NA intron (NM_178398, intron 1 of 11) CpG 462 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak1_58_38_0.313998866460431_5.44240165209246_0.554098881286537 chr13 24564688 24565330 + 0.554098881286537 NA Intergenic Intergenic -17180 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak1_45_48_-0.371856542318953_5.42878157295573_0.554098881286537 chr8 36727877 36728203 + 0.554098881286537 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 5014 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-6 chr2 33220976 33221680 + 0.554098881286537 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 5367 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-7 chr2 118113851 118114675 + 0.554098881286537 NA intron (NM_001313914, intron 3 of 21) intron (NM_001313914, intron 3 of 21) 2387 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-4 chr2 44926358 44926955 + 0.554098881286537 NA Intergenic CpG -65034 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak1_58_38_0.313998866460431_5.44240165209246_0.554098881286537-3 chr13 98014397 98015368 + 0.554098881286537 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 191283 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak1_58_38_0.313998866460431_5.44240165209246_0.554098881286537-2 chr13 34371366 34371850 + 0.554098881286537 NA Intergenic Intergenic -26426 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_58_38_0.313998866460431_5.44240165209246_0.554098881286537 chr15 89075428 89075845 + 0.554098881286537 NA promoter-TSS (NM_001355617) promoter-TSS (NM_001355617) 218 NR_040417 69120 Mm.276391 NR_040417 ENSMUSG00000087331 1810021B22Rik - RIKEN cDNA 1810021B22 gene ncRNA common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-4 chr12 108495917 108496554 + 0.554098881286537 NA intron (NM_001043335, intron 4 of 21) intron (NM_001043335, intron 4 of 21) -58485 NM_001163394 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774|b2b2600Clo Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-2 chr9 78448349 78448862 + 0.554098881286537 NA intron (NM_026658, intron 1 of 11) CpG 395 NM_026658 68291 Mm.291779 NM_026658 ENSMUSG00000032342 Mto1 2310039H01Rik|5730419A02Rik mitochondrial tRNA translation optimization 1 protein-coding common_peak2_45_48_-0.371856542318953_5.42878157295573_0.554098881286537 chr11 100737729 100738196 + 0.554098881286537 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 253 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding common_peak1_58_38_0.313998866460431_5.44240165209246_0.554098881286537-4 chr2 155929660 155930541 + 0.554098881286537 NA 5' UTR (NM_018888, exon 1 of 10) 5' UTR (NM_018888, exon 1 of 10) 210 NM_001355443 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-7 chr5 108312266 108313098 + 0.554098881286537 NA promoter-TSS (NM_001081234) promoter-TSS (NM_001081234) -243 NM_001081234 433931 Mm.319881 NM_001081234 ENSMUSG00000029263 Pigg Gpi7 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding common_peak2_58_38_0.313998866460431_5.44240165209246_0.554098881286537-2 chr5 107288898 107289637 + 0.554098881286537 NA 5' UTR (NM_011578, exon 1 of 17) 5' UTR (NM_011578, exon 1 of 17) 362 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding common_peak2_57_38_0.289510802515018_5.43015762011976_0.554098881286537 chr11 115824192 115824699 + 0.554098881286537 NA intron (NM_001252532, intron 1 of 25) CpG 387 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_57_38_0.289510802515018_5.43015762011976_0.554098881286537-6 chr4 117126415 117126874 + 0.554098881286537 NA promoter-TSS (NM_175030) promoter-TSS (NM_175030) -169 NM_175030 242646 Mm.358914 NM_175030 ENSMUSG00000047671 Tctex1d4 4833401D15Rik Tctex1 domain containing 4 protein-coding common_peak1_45_48_-0.371856542318953_5.42878157295573_0.554098881286537-3 chr9 92251225 92251941 + 0.554098881286537 NA intron (NM_011636, intron 1 of 8) (CAAA)n|Simple_repeat|Simple_repeat 1389 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding common_peak1_144_102_0.201014413374684_6.78700773387056_0.553933642692859 chr7 28929204 28930791 + 0.553933642692859 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 32335 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_144_102_0.201014413374684_6.78700773387056_0.553933642692859 chr1 91022795 91024070 + 0.553933642692859 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 24705 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_124_118_-0.219916981975_6.78485927232044_0.553933642692835 chr10 59578030 59579585 + 0.553933642692835 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 37885 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak1_82_56_0.255433606726177_5.96060681752783_0.553596074251794-3 chr19 41483314 41484128 + 0.553596074251794 NA Intergenic Intergenic -41531 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak1_67_68_-0.305748579014962_5.95565016727069_0.553596074251794 chr11 62602816 62603622 + 0.553596074251794 NA promoter-TSS (NR_028550) promoter-TSS (NR_028550) 133 NR_028526 100217426 NR_028526 ENSMUSG00000064437 Snord49b MBII-252|MBII-366 small nucleolar RNA, C/D box 49B snoRNA common_peak1_67_68_-0.305748579014962_5.95565016727069_0.553596074251794-2 chr2 53190493 53191179 + 0.553596074251794 NA intron (NM_018785, intron 1 of 25) intron (NM_018785, intron 1 of 25) 351 NM_018785 56194 Mm.257474 NM_018785 ENSMUSG00000061136 Prpf40a 2810012K09Rik|FBP-11|FBP11|Fnbp11|Fnbp3 pre-mRNA processing factor 40A protein-coding common_peak1_82_56_0.255433606726177_5.96060681752783_0.553596074251794-2 chr12 55398875 55399289 + 0.553596074251794 NA intron (NM_011968, intron 1 of 6) CpG 257 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak1_82_56_0.255433606726177_5.96060681752783_0.553596074251794 chr11 106215244 106216225 + 0.553596074251794 NA intron (NM_026009, intron 1 of 12) intron (NM_026009, intron 1 of 12) 633 NM_026009 67163 Mm.22109 NM_026009 ENSMUSG00000078622 Ccdc47 2610204L23Rik|C88307|asp4|calumin coiled-coil domain containing 47 protein-coding common_peak2_67_68_-0.305748579014962_5.95565016727069_0.553596074251794 chr4 148151369 148152195 + 0.553596074251794 NA 5' UTR (NM_015797, exon 1 of 6) 5' UTR (NM_015797, exon 1 of 6) 143 NM_001163705 50762 Mm.27445 NM_015797 ENSMUSG00000055401 Fbxo6 AA408845|FBG2|Fbs2|Fbx6b|Fbxo6b F-box protein 6 protein-coding common_peak1_141_133_-0.208523428324284_6.96182747629563_0.55325648810194 chr18 80534752 80535372 + 0.55325648810194 NA Intergenic Intergenic 9484 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_201_146_0.162770574847804_7.28105763226027_0.553245399638007 chr8 109920222 109922040 + 0.553245399638007 NA intron (NM_001122594, intron 10 of 18) intron (NM_001122594, intron 10 of 18) 41074 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak2_201_146_0.162770574847804_7.28105763226027_0.553245399638007 chr3 95314693 95316152 + 0.553245399638007 NA intron (NM_029789, intron 1 of 10) CpG 232 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_246_180_0.150705738552771_7.57519875635959_0.552501071343185 chr3 41193939 41195459 + 0.552501071343185 NA Intergenic Intergenic -111653 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_246_180_0.150705738552771_7.57519875635959_0.552501071343185-2 chr3 146499842 146501083 + 0.552501071343185 NA promoter-TSS (NM_027617) promoter-TSS (NM_027617) 626 NM_010318 14707 Mm.140804 NM_010318 ENSMUSG00000068523 Gng5 G(y)5 guanine nucleotide binding protein (G protein), gamma 5 protein-coding common_peak2_160_149_-0.191361318698741_7.13313803114651_0.552473730091231 chr8 110808881 110809921 + 0.552473730091231 NA Intergenic Intergenic -3477 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_128_90_0.212228512664947_6.61390889653117_0.551832186332007 chr6 90359748 90361142 + 0.551832186332007 NA intron (NM_144940, intron 18 of 19) intron (NM_144940, intron 18 of 19) -9049 NM_173002 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_127_90_0.201080465299367_6.60833487284838_0.551832186332007-2 chr8 105594042 105594980 + 0.551832186332007 NA Intergenic Intergenic -10718 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak2_127_90_0.201080465299367_6.60833487284838_0.551832186332007 chr15 85336315 85336988 + 0.551832186332007 NA intron (NM_016843, intron 1 of 11) CpG 270 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding common_peak2_127_90_0.201080465299367_6.60833487284838_0.551832186332007-2 chr8 25331458 25332578 + 0.551832186332007 NA Intergenic Intergenic -25748 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_127_90_0.201080465299367_6.60833487284838_0.551832186332007 chr1 63176108 63177482 + 0.551832186332007 NA promoter-TSS (NM_001160039) promoter-TSS (NM_001160039) 27 NM_145518 227197 Mm.290791 NM_145518 ENSMUSG00000025968 Ndufs1 5830412M15Rik|9930026A05Rik NADH dehydrogenase (ubiquinone) Fe-S protein 1 protein-coding common_peak2_109_105_-0.236143132785505_6.60984888817045_0.551832186331982 chr1 93753752 93755286 + 0.551832186331982 NA promoter-TSS (NM_174874) promoter-TSS (NM_174874) 319 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak1_70_47_0.279658240985575_5.72479162121394_0.551726087667598-2 chr3 66985700 66986316 + 0.551726087667598 NA promoter-TSS (NM_001356273) promoter-TSS (NM_001356273) 41 NM_001356273 66880 Mm.316418 NM_025822 ENSMUSG00000034544 Rsrc1 1200013F24Rik|SRrp53 arginine/serine-rich coiled-coil 1 protein-coding common_peak2_56_58_-0.33264399258924_5.71632105306722_0.551726087667598-3 chr5 117362685 117363300 + 0.551726087667598 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 5687 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_70_47_0.279658240985575_5.72479162121394_0.551726087667598-3 chr3 152346366 152347151 + 0.551726087667598 NA intron (NM_001355666, intron 1 of 21) CpG 280 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding common_peak1_70_47_0.279658240985575_5.72479162121394_0.551726087667598 chr3 27656258 27657277 + 0.551726087667598 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 53685 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_70_47_0.279658240985575_5.72479162121394_0.551726087667598 chr11 106036965 106037476 + 0.551726087667598 NA exon (NM_027946, exon 1 of 7) exon (NM_027946, exon 1 of 7) 348 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak2_56_58_-0.33264399258924_5.71632105306722_0.551726087667598-2 chr19 33391908 33392273 + 0.551726087667598 NA 5' UTR (NM_001167818, exon 1 of 7) 5' UTR (NM_001167818, exon 1 of 7) 205 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak1_56_58_-0.33264399258924_5.71632105306722_0.551726087667598 chr16 3744172 3744628 + 0.551726087667598 NA exon (NM_148924, exon 1 of 6) exon (NM_148924, exon 1 of 6) 301 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak2_56_58_-0.33264399258924_5.71632105306722_0.551726087667598 chr11 79196727 79197418 + 0.551726087667598 NA Intergenic Intergenic 45952 NM_001042565 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_70_47_0.279658240985575_5.72479162121394_0.551726087667598-4 chr5 92082974 92083637 + 0.551726087667598 NA promoter-TSS (NM_001080797) promoter-TSS (NM_001080797) 32 NM_001359196 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding common_peak1_56_58_-0.33264399258924_5.71632105306722_0.551726087667598-2 chr4 133574486 133575210 + 0.551726087667598 NA exon (NM_172876, exon 1 of 7) exon (NM_172876, exon 1 of 7) 103 NM_172876 242691 Mm.40110 NM_172876 ENSMUSG00000028850 Gpatch3 D930035B09Rik|Gpatc3 G patch domain containing 3 protein-coding common_peak2_112_78_0.226541953483149_6.41705172491868_0.55167174988274 chr15 76197967 76198689 + 0.55167174988274 NA promoter-TSS (NM_201393) promoter-TSS (NM_201393) -119 NM_201393 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_94_92_-0.25739343738225_6.41046209241691_0.55167174988274 chr6 55177788 55179043 + 0.55167174988274 NA Intergenic Intergenic -3425 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak1_112_78_0.226541953483149_6.41705172491868_0.55167174988274 chrX 13071648 13072683 + 0.55167174988274 NA intron (NM_009481, intron 1 of 44) CpG 667 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak2_145_103_0.196920737851591_6.79890008706689_0.551651255369988 chr19 40270689 40271471 + 0.551651255369988 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 536 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_125_119_-0.220575276934928_6.79660295714105_0.551651255369988 chr19 53600091 53601561 + 0.551651255369988 NA intron (NM_007790, intron 1 of 28) CpG 430 NM_007790 13006 Mm.14910 NM_007790 ENSMUSG00000024974 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD structural maintenance of chromosomes 3 protein-coding common_peak2_163_117_0.181261538665352_6.97327381869452_0.551243620767812 chr18 75363501 75364977 + 0.551243620767812 NA non-coding (NR_155535, exon 5 of 7) non-coding (NR_155535, exon 5 of 7) 2849 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_142_134_-0.209197043789698_6.97221707515598_0.551243620767812 chr8 110823021 110824982 + 0.551243620767812 NA intron (NM_133953, intron 14 of 25) intron (NM_133953, intron 14 of 25) 14597 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_318_284_-0.137824708868818_8.08590575461769_0.551057644864817 chr16 92620209 92622685 + 0.551057644864817 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 75882 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_81_80_-0.268890435284186_6.20540478524253_0.551001890598192 chr13 52977343 52979022 + 0.551001890598192 NA intron (NM_017373, intron 1 of 1) (A)n|Simple_repeat|Simple_repeat 2857 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_97_67_0.238840322542472_6.20688300252158_0.551001890598192 chr2 13406723 13407896 + 0.551001890598192 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 84567 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_81_80_-0.268890435284186_6.20540478524253_0.551001890598192 chr11 5901274 5902409 + 0.551001890598192 NA intron (NM_001287386, intron 9 of 9) intron (NM_001287386, intron 9 of 9) -3059 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding common_peak2_97_67_0.238840322542472_6.20688300252158_0.551001890598192-2 chr4 33247910 33248472 + 0.551001890598192 NA exon (NM_001033225, exon 1 of 2) exon (NM_001033225, exon 1 of 2) 596 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak1_161_150_-0.192077265770709_7.14236610643972_0.550688004371156 chr8 71382151 71383441 + 0.550688004371156 NA promoter-TSS (NM_010150) promoter-TSS (NM_010150) -844 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak2_350_260_0.126029025421104_8.09092050928044_0.550139466601834 chr1 59762339 59765717 + 0.550139466601834 NA promoter-TSS (NM_007561) promoter-TSS (NM_007561) -251 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding unique_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-3 chr13 70644133 70644720 + 0.550049347815239 NA Intergenic Intergenic -6792 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-5 chr19 6941117 6941485 + 0.550049347815239 NA promoter-TSS (NM_007522) promoter-TSS (NM_007522) -108 NM_001177360 107173 Mm.276555 NM_207220 ENSMUSG00000024958 Gpr137 AI428855 G protein-coupled receptor 137 protein-coding common_peak1_28_32_-0.462426118407943_4.81318106015448_0.550049347815239 chr12 116047806 116048131 + 0.550049347815239 NA intron (NM_019565, intron 1 of 2) CpG 244 NM_019565 56220 Mm.254997 NM_019565 ENSMUSG00000042063 Zfp386 Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) protein-coding unique_peak1_28_32_-0.462426118407943_4.81318106015448_0.550049347815239 chr9 43946051 43946548 + 0.550049347815239 NA Intergenic Intergenic -97085 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239 chr1 136227089 136227603 + 0.550049347815239 NA intron (NM_028872, intron 2 of 9) intron (NM_028872, intron 2 of 9) 6934 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding unique_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-5 chr7 13278538 13279030 + 0.550049347815239 NA promoter-TSS (NM_010715) promoter-TSS (NM_010715) -42 NM_010715 16881 Mm.288179 NM_010715 ENSMUSG00000056394 Lig1 AL033288|LigI ligase I, DNA, ATP-dependent protein-coding unique_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-2 chr13 41321233 41322034 + 0.550049347815239 NA intron (NM_001111324, intron 3 of 7) intron (NM_001111324, intron 3 of 7) 37368 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-2 chr10 79985384 79985947 + 0.550049347815239 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1405 NM_001003949 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding unique_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239 chr11 19014412 19014994 + 0.550049347815239 NA intron (NM_010789, intron 2 of 11) intron (NM_010789, intron 2 of 11) 4266 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-6 chr8 84270100 84270358 + 0.550049347815239 NA intron (NM_026350, intron 1 of 9) intron (NM_026350, intron 1 of 9) 173 NM_001294281 67736 Mm.30095 NM_026350 ENSMUSG00000004994 Ccdc130 4930527D15Rik|C77430 coiled-coil domain containing 130 protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-4 chr16 4601222 4601769 + 0.550049347815239 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 6782 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-3 chr5 24843096 24843533 + 0.550049347815239 NA promoter-TSS (NM_053075) promoter-TSS (NM_053075) -953 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-3 chr12 8379174 8379499 + 0.550049347815239 NA Intergenic Intergenic 65903 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-7 chr9 123238233 123238797 + 0.550049347815239 NA Intergenic Intergenic 22274 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding common_peak1_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-2 chr13 60051161 60051703 + 0.550049347815239 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 21721 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA unique_peak2_28_32_-0.462426118407943_4.81318106015448_0.550049347815239-4 chr15 76330705 76331124 + 0.550049347815239 NA promoter-TSS (NM_010331) promoter-TSS (NM_010331) -380 NM_010331 14731 Mm.5903 NM_010331 ENSMUSG00000022561 Gpaa1 C80044|mGAA1 GPI anchor attachment protein 1 protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-3 chr12 86085518 86085851 + 0.550049347815233 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 3123 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_38_24_0.362517586907845_4.82511498322865_0.550049347815233-4 chr8 44800958 44801382 + 0.550049347815233 NA Intergenic Intergenic -149038 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_38_24_0.362517586907845_4.82511498322865_0.550049347815233-3 chr18 3337938 3338192 + 0.550049347815233 NA promoter-TSS (NM_001110852) promoter-TSS (NM_001110852) -476 NM_001110852 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak2_38_24_0.362517586907845_4.82511498322865_0.550049347815233-2 chr12 70937841 70938197 + 0.550049347815233 NA exon (NM_019785, exon 1 of 13) exon (NM_019785, exon 1 of 13) 162 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-2 chr12 70467101 70467705 + 0.550049347815233 NA 3' UTR (NM_028339, exon 8 of 8) 3' UTR (NM_028339, exon 8 of 8) 14249 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-6 chr4 148591580 148592155 + 0.550049347815233 NA intron (NM_009272, intron 1 of 6) CpG 354 NM_009272 20810 Mm.10 NM_009272 ENSMUSG00000006442 Srm AA407669|SpdST|SpdSy spermidine synthase protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-7 chr7 142374821 142375278 + 0.550049347815233 NA TTS (NM_009983) TTS (NM_009983) -1303 NM_001347541 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-5 chr4 43973626 43974008 + 0.550049347815233 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -9687 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-9 chr9 44326591 44327081 + 0.550049347815233 NA promoter-TSS (NM_007875) promoter-TSS (NM_007875) -9 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-4 chr19 16273479 16273791 + 0.550049347815233 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 41369 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-8 chr8 25075228 25075858 + 0.550049347815233 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 26268 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-10 chr9 49813737 49814085 + 0.550049347815233 NA Intergenic Intergenic -14518 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233 chr10 62320331 62320917 + 0.550049347815233 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 19797 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_38_24_0.362517586907845_4.82511498322865_0.550049347815233 chr11 115186841 115187247 + 0.550049347815233 NA promoter-TSS (NM_001033393) promoter-TSS (NM_001033393) 272 NM_025400 66176 Mm.86823 NM_025400 ENSMUSG00000015542 Nat9 1110028N05Rik N-acetyltransferase 9 (GCN5-related, putative) protein-coding common_peak1_38_24_0.362517586907845_4.82511498322865_0.550049347815233-11 chr9 63664738 63665111 + 0.550049347815233 NA intron (NM_016769, intron 4 of 8) intron (NM_016769, intron 4 of 8) 62278 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-5 chr4 101646886 101647177 + 0.549581527953409 NA promoter-TSS (NM_175036) promoter-TSS (NM_175036) -752 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak1_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-2 chr2 117911109 117911318 + 0.549581527953409 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 89285 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-2 chr2 92389371 92389571 + 0.549581527953409 NA intron (NM_011162, intron 2 of 11) CpG -2025 NR_105966 102466783 NR_105966 ENSMUSG00000099093 Mir7000 Gm27338|mmu-mir-7000 microRNA 7000 ncRNA common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-5 chr13 114735635 114736079 + 0.549581527953409 NA Intergenic Intergenic -82380 NM_013826 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-18 chr8 121476611 121476985 + 0.549581527953409 NA Intergenic Intergenic 65156 NM_001357260 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding common_peak1_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-4 chr4 84884552 84884800 + 0.549581527953409 NA exon (NM_177385, exon 1 of 5) exon (NM_177385, exon 1 of 5) 367 NM_177385 338349 Mm.440562 NM_175275 ENSMUSG00000038070 Cntln AI448092|B430108F07Rik|D530005L17Rik centlein, centrosomal protein protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-2 chr10 116580745 116581128 + 0.549581527953409 NA promoter-TSS (NM_001359248) promoter-TSS (NM_001359248) -400 NM_001359248 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-15 chr8 25537492 25537801 + 0.549581527953409 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 18437 NR_110510 102633315 Mm.437828 NR_110510 ENSMUSG00000086134 Gm16159 - predicted gene 16159 ncRNA unique_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409 chr19 53543190 53543622 + 0.549581527953409 NA Intergenic Intergenic 14088 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-3 chr4 40143017 40143234 + 0.549581527953409 NA promoter-TSS (NM_007386) promoter-TSS (NM_007386) -140 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-17 chr8 82631442 82631903 + 0.549581527953409 NA Intergenic Intergenic 142454 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409 chr1 105663300 105663706 + 0.549581527953409 NA promoter-TSS (NM_029349) promoter-TSS (NM_029349) 173 NM_013784 27392 Mm.268911 NM_013784 ENSMUSG00000056536 Pign Gm20308|PIG-N phosphatidylinositol glycan anchor biosynthesis, class N protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-14 chr7 128308908 128309366 + 0.549581527953409 NA Intergenic Intergenic -11006 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-3 chr12 78728446 78728876 + 0.549581527953409 NA intron (NM_029069, intron 7 of 8) intron (NM_029069, intron 7 of 8) -20286 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-11 chr4 82443538 82443861 + 0.549581527953409 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 62080 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-8 chr3 90603866 90604315 + 0.549581527953409 NA intron (NM_011311, intron 1 of 2) intron (NM_011311, intron 1 of 2) 320 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding unique_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-3 chr5 137600126 137600526 + 0.549581527953409 NA exon (NM_030037, exon 2 of 6) exon (NM_030037, exon 2 of 6) 382 NM_001254762 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak1_21_25_-0.514209335970787_4.4433350501557_0.549581527953409 chr1 153572580 153573073 + 0.549581527953409 NA Intergenic Intergenic -23112 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-19 chr9 88373496 88373775 + 0.549581527953409 NA Intergenic Intergenic 46026 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-4 chr13 72198121 72198353 + 0.549581527953409 NA Intergenic Intergenic -234514 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-10 chr4 62287699 62287942 + 0.549581527953409 NA intron (NM_025286, intron 1 of 3) intron (NM_025286, intron 1 of 3) 1391 NM_025286 20530 Mm.292539 NM_025286 ENSMUSG00000066152 Slc31a2 AI604396|CTR2 solute carrier family 31, member 2 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-9 chr3 152192187 152192565 + 0.549581527953409 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 1469 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-16 chr8 61589070 61589600 + 0.549581527953409 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 1834 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-6 chr17 63678661 63678950 + 0.549581527953409 NA Intergenic Intergenic -178225 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-13 chr4 155130244 155130641 + 0.549581527953409 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 43838 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-12 chr4 132533318 132533560 + 0.549581527953409 NA intron (NM_007512, intron 2 of 3) CpG-10417 1975 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding unique_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-5 chr8 94306319 94306650 + 0.549581527953409 NA intron (NM_001357268, intron 13 of 20) intron (NM_001357268, intron 13 of 20) -17827 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-7 chr2 60871429 60871789 + 0.549581527953409 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 9829 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_21_25_-0.514209335970787_4.4433350501557_0.549581527953409-4 chr7 98574589 98574994 + 0.549581527953409 NA Intergenic Intergenic 80569 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-4 chr12 84845307 84845767 + 0.549581527953406 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -30265 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-12 chr4 57844636 57845058 + 0.549581527953406 NA promoter-TSS (NM_009649) promoter-TSS (NM_009649) -401 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-7 chr16 23424193 23424419 + 0.549581527953406 NA Intergenic Intergenic -4827 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-2 chr11 58199217 58199460 + 0.549581527953406 NA promoter-TSS (NM_018738) promoter-TSS (NM_018738) -218 NM_018738 16145 Mm.33902 NM_018738 ENSMUSG00000078853 Igtp AW558444|Irgm3 interferon gamma induced GTPase protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-15 chr7 45433533 45433968 + 0.549581527953406 NA intron (NM_011304, intron 1 of 14) intron (NM_011304, intron 1 of 14) 714 NM_011304 20174 Mm.34410 NM_011304 ENSMUSG00000003868 Ruvbl2 mp47|p47 RuvB-like protein 2 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-11 chr8 94052548 94052763 + 0.549581527953406 NA intron (NM_001093757, intron 4 of 11) intron (NM_001093757, intron 4 of 11) 15457 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-6 chr4 132842749 132843023 + 0.549581527953406 NA exon (NM_001355199, exon 1 of 7) exon (NM_001355199, exon 1 of 7) 248 NM_001355198 100336 Mm.105230 NM_146154 ENSMUSG00000028882 Ppp1r8 6330548N22Rik|AU044684|NIPP1 protein phosphatase 1, regulatory (inhibitor) subunit 8 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-11 chr3 22077899 22078309 + 0.549581527953406 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 1452 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-4 chr12 86001072 86001620 + 0.549581527953406 NA intron (NM_001347395, intron 30 of 32) intron (NM_001347395, intron 30 of 32) 77695 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-5 chr13 73683927 73684228 + 0.549581527953406 NA exon (NM_028878, exon 10 of 12) exon (NM_028878, exon 10 of 12) -6054 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-7 chr5 100037421 100038330 + 0.549581527953406 NA exon (NM_016690, exon 2 of 8) exon (NM_016690, exon 2 of 8) 1347 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-10 chr2 137458242 137458944 + 0.549581527953406 NA Intergenic Intergenic -342073 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-4 chr12 3350362 3350634 + 0.549581527953406 NA Intergenic Intergenic -14634 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-9 chr7 4813035 4813315 + 0.549581527953406 NA promoter-TSS (NM_133777) promoter-TSS (NM_133777) -835 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-6 chr16 45893822 45894176 + 0.549581527953406 NA Intergenic Intergenic -49248 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406 chr1 9967893 9968446 + 0.549581527953406 NA promoter-TSS (NM_001285425) promoter-TSS (NM_001285425) -684 NM_001285425 100039596 Mm.412928 NM_001285425 ENSMUSG00000099032 Tcf24 Gm10567|Gm2330 transcription factor 24 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-9 chr19 44294269 44294615 + 0.549581527953406 NA intron (NM_009128, intron 1 of 5) intron (NM_009128, intron 1 of 5) 766 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-13 chr5 104395412 104395843 + 0.549581527953406 NA Intergenic Intergenic -39484 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-5 chr15 81523028 81523531 + 0.549581527953406 NA Intergenic CpG 56963 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406 chr1 143777432 143777890 + 0.549581527953406 NA promoter-TSS (NM_013835) promoter-TSS (NM_013835) 383 NM_019562 56207 Mm.261004 NM_019562 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-3 chr10 20952719 20953098 + 0.549581527953406 NA intron (NM_001358561, intron 1 of 22) CpG 361 NM_001358561 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-16 chr9 62372507 62372958 + 0.549581527953406 NA intron (NM_009672, intron 3 of 6) intron (NM_009672, intron 3 of 6) 31389 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-2 chr1 132128928 132129505 + 0.549581527953406 NA intron (NM_008795, intron 1 of 15) B1F2|SINE|Alu 10469 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-3 chr11 59455850 59456408 + 0.549581527953406 NA non-coding (NR_037992, exon 6 of 6) non-coding (NR_037992, exon 6 of 6) 6084 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-8 chr2 154613071 154613528 + 0.549581527953406 NA promoter-TSS (NM_199304) promoter-TSS (NM_199304) -69 NM_199304 228807 Mm.103555 NM_199304 ENSMUSG00000059842 Zfp341 Znf341 zinc finger protein 341 protein-coding unique_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406 chr1 53837780 53838083 + 0.549581527953406 NA intron (NM_001001883, intron 23 of 28) intron (NM_001001883, intron 23 of 28) -11493 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-14 chr6 99484627 99485084 + 0.549581527953406 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 36138 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-3 chr11 75458418 75458819 + 0.549581527953406 NA Intergenic (TGG)n|Simple_repeat|Simple_repeat -2921 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-12 chr8 111724802 111725091 + 0.549581527953406 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 7190 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-6 chr16 10974684 10975063 + 0.549581527953406 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 18248 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-8 chr7 139970734 139971143 + 0.549581527953406 NA Intergenic Intergenic 7817 NM_001347614 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-7 chr17 75168278 75168488 + 0.549581527953406 NA intron (NM_019919, intron 4 of 33) intron (NM_019919, intron 4 of 33) -10398 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-8 chr17 24724083 24724321 + 0.549581527953406 NA exon (NM_026684, exon 1 of 4) exon (NM_026684, exon 1 of 4) 186 NM_026684 68342 Mm.1129 NM_026684 ENSMUSG00000040048 Ndufb10 0610011B04Rik|22kDa|PDSW NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-13 chr9 44499727 44499996 + 0.549581527953406 NA intron (NM_030256, intron 2 of 8) intron (NM_030256, intron 2 of 8) 725 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406 chr10 76931493 76931965 + 0.549581527953406 NA intron (NM_001347216, intron 1 of 15) intron (NM_001347216, intron 1 of 15) 30218 NM_001347216 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding unique_peak1_29_18_0.382605031755544_4.43923002932136_0.549581527953406-5 chr19 6992013 6992430 + 0.549581527953406 NA TTS (NM_026675) TTS (NM_026675) 297 NM_001356999 57431 Mm.10721 NM_020566 ENSMUSG00000024963 Dnajc4 Hspf2|Mcg18 DnaJ heat shock protein family (Hsp40) member C4 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-2 chr11 74522965 74523308 + 0.549581527953406 NA intron (NM_001015046, intron 2 of 24) CpG 67022 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_29_18_0.382605031755544_4.43923002932136_0.549581527953406-10 chr7 109986573 109986871 + 0.549581527953406 NA promoter-TSS (NM_153525) promoter-TSS (NM_153525) -492 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding common_peak2_69_69_-0.284982003972408_5.98679201495876_0.549574798715332 chr11 31562648 31563388 + 0.549574798715332 NA Intergenic Intergenic 108844 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_68_69_-0.305594112921257_5.97648596048434_0.549574798715332 chr14 31018632 31019645 + 0.549574798715332 NA promoter-TSS (NM_153547) promoter-TSS (NM_153547) 0 NM_001081251 66923 Mm.27913 NM_025847 ENSMUSG00000042323 Pbrm1 2610016F04Rik|AI507524|BAF180|Pb1 polybromo 1 protein-coding common_peak2_68_69_-0.305594112921257_5.97648596048434_0.549574798715332 chr11 88068529 88069302 + 0.549574798715332 NA intron (NM_016686, intron 1 of 5) CpG 636 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding common_peak2_68_69_-0.305594112921257_5.97648596048434_0.549574798715332-2 chr2 132247271 132248358 + 0.549574798715332 NA promoter-TSS (NM_001141971) promoter-TSS (NM_001141971) -26 NM_001141971 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak1_69_69_-0.284982003972408_5.98679201495876_0.549574798715332 chr19 44134779 44135872 + 0.549574798715332 NA 5' UTR (NM_001356578, exon 1 of 14) 5' UTR (NM_001356578, exon 1 of 14) 131 NM_001356578 72502 Mm.276109 NM_001081077 ENSMUSG00000025200 Cwf19l1 - CWF19-like 1, cell cycle control (S. pombe) protein-coding common_peak2_69_69_-0.284982003972408_5.98679201495876_0.549574798715332-2 chr2 24454319 24455697 + 0.549574798715332 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 20591 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_83_57_0.247498721318564_5.98173035578685_0.54957479871532 chr6 47877957 47878861 + 0.54957479871532 NA intron (NM_146175, intron 1 of 7) MER5B|DNA|hAT-Charlie 854 NM_146175 101095 Mm.440186 NM_146175 ENSMUSG00000025821 Zfp282 AI449432|C81429|E430019K09Rik|HUB1 zinc finger protein 282 protein-coding common_peak1_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-4 chr4 107434732 107435282 + 0.549429090733251 NA intron (NM_147221, intron 1 of 10) CpG 288 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-5 chr14 76780735 76781211 + 0.549429090733251 NA Intergenic Intergenic 20842 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-2 chr16 45384326 45384888 + 0.549429090733251 NA intron (NM_001358443, intron 4 of 4) intron (NM_001358443, intron 4 of 4) 24446 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251 chr11 108365568 108366461 + 0.549429090733251 NA Intergenic MER5A|DNA|hAT-Charlie -22126 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_37_40_-0.388388550072936_5.16335772958162_0.549429090733251-3 chr9 108263035 108263736 + 0.549429090733251 NA intron (NM_001276486, intron 1 of 3) CpG 430 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding common_peak1_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-3 chr2 35432354 35432831 + 0.549429090733251 NA 5' UTR (NM_001145821, exon 2 of 8) 5' UTR (NM_001145821, exon 2 of 8) 28857 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-4 chr13 90796899 90797351 + 0.549429090733251 NA Intergenic Intergenic 108230 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-2 chr11 113201390 113201925 + 0.549429090733251 NA non-coding (NR_015556, exon 1 of 3) non-coding (NR_015556, exon 1 of 3) 181 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_37_40_-0.388388550072936_5.16335772958162_0.549429090733251-4 chrX 68678812 68679418 + 0.549429090733251 NA promoter-TSS (NR_033481) promoter-TSS (NR_033481) 574 NM_001290424 14265 Mm.3451 NM_008031 ENSMUSG00000000838 Fmr1 FMRP|Fmr-1 fragile X mental retardation syndrome 1 protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-6 chr3 102659789 102660462 + 0.549429090733251 NA Intergenic Intergenic -74645 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak2_37_40_-0.388388550072936_5.16335772958162_0.549429090733251 chr11 29514566 29515007 + 0.549429090733251 NA intron (NM_001163454, intron 1 of 2) intron (NM_001163454, intron 1 of 2) 247 NM_026465 67939 Mm.251087 NM_026465 ENSMUSG00000032673 Prorsd1 2010316F05Rik|Ncrna00117|Prdxdd1 prolyl-tRNA synthetase domain containing 1 protein-coding common_peak1_36_40_-0.426591263560642_5.14425637283776_0.549429090733251 chr16 33057101 33057722 + 0.549429090733251 NA exon (NM_021338, exon 3 of 5) exon (NM_021338, exon 3 of 5) 897 NM_021338 57808 Mm.19355 NM_021338 ENSMUSG00000060636 Rpl35a 2810431L15Rik|Rpl35 ribosomal protein L35A protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-7 chr6 48048533 48049092 + 0.549429090733251 NA promoter-TSS (NM_001081382) promoter-TSS (NM_001081382) -698 NM_001081382 72306 Mm.381553 NM_001081382 ENSMUSG00000071477 Zfp777 2500002G23Rik zinc finger protein 777 protein-coding common_peak2_36_40_-0.426591263560642_5.14425637283776_0.549429090733251-3 chr12 111432487 111432841 + 0.549429090733251 NA TTS (NM_028807) TTS (NM_028807) -9997 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak2_37_40_-0.388388550072936_5.16335772958162_0.549429090733251-2 chr11 58024054 58024786 + 0.549429090733251 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 15356 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak1_37_40_-0.388388550072936_5.16335772958162_0.549429090733251 chr14 14633563 14634056 + 0.549429090733251 NA Intergenic Intergenic -69216 NM_001360505 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding unique_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244 chr11 69418281 69418787 + 0.549429090733244 NA Intergenic Intergenic -4859 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak2_48_31_0.333358143366055_5.16667907168303_0.549429090733244 chr13 63187569 63187834 + 0.549429090733244 NA intron (NM_001289926, intron 7 of 15) intron (NM_001289926, intron 7 of 15) -52328 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-4 chr15 102013161 102013682 + 0.549429090733244 NA Intergenic Intergenic -9079 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-2 chr11 77493607 77494371 + 0.549429090733244 NA intron (NM_001004144, intron 1 of 19) CpG 577 NM_001004144 216963 Mm.290182 NM_001004144 ENSMUSG00000011877 Git1 Cat-1|p95Cat G protein-coupled receptor kinase-interactor 1 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244 chr11 120237790 120238595 + 0.549429090733244 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 5245 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-8 chr6 128032131 128032624 + 0.549429090733244 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 111201 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak2_47_31_0.303820666872006_5.151910333436_0.549429090733244-3 chr3 138742363 138742784 + 0.549429090733244 NA non-coding (NR_121195, exon 1 of 8) non-coding (NR_121195, exon 1 of 8) 365 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-5 chr5 64160100 64160626 + 0.549429090733244 NA 5' UTR (NM_001310611, exon 1 of 22) 5' UTR (NM_001310611, exon 1 of 22) 103 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-7 chr7 74376220 74376795 + 0.549429090733244 NA intron (NM_001038643, intron 2 of 10) intron (NM_001038643, intron 2 of 10) 178273 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_48_31_0.333358143366055_5.16667907168303_0.549429090733244-3 chr5 109557539 109558321 + 0.549429090733244 NA intron (NM_001310694, intron 1 of 7) intron (NM_001310694, intron 1 of 7) 1063 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-3 chr14 54687109 54687638 + 0.549429090733244 NA promoter-TSS (NM_023190) promoter-TSS (NM_023190) -442 NM_023190 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-10 chr8 91999768 92000268 + 0.549429090733244 NA Intergenic Intergenic -198364 NM_008393 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding unique_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-3 chr2 152929761 152930492 + 0.549429090733244 NA Intergenic Intergenic 3082 NM_010226 14239 Mm.205798 NM_010226 ENSMUSG00000074676 Foxs1 FREAC10|Fkh3|Fkhl18 forkhead box S1 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-3 chr18 57779324 57779923 + 0.549429090733244 NA non-coding (NR_152224, exon 1 of 4) non-coding (NR_152224, exon 1 of 4) 372 NR_152224 100503033 Mm.381112 NR_152224 Gm19519 - predicted gene, 19519 ncRNA common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-2 chr12 27920996 27921695 + 0.549429090733244 NA Intergenic Intergenic -578627 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-5 chr2 153433189 153434053 + 0.549429090733244 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 10858 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-2 chr19 6986903 6987677 + 0.549429090733244 NA TTS (NM_001357001) TTS (NM_001357001) 361 NM_001185164 22340 Mm.15607 NM_011697 ENSMUSG00000024962 Vegfb VEGF-B|Vrf vascular endothelial growth factor B protein-coding common_peak2_48_31_0.333358143366055_5.16667907168303_0.549429090733244-2 chr16 24475419 24476156 + 0.549429090733244 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) 27696 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244 chr10 67756058 67756757 + 0.549429090733244 NA Intergenic Intergenic 156255 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-6 chr7 30956142 30956615 + 0.549429090733244 NA intron (NM_011680, intron 2 of 9) CpG-12986 425 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding common_peak2_47_31_0.303820666872006_5.151910333436_0.549429090733244 chr10 94116365 94116895 + 0.549429090733244 NA intron (NM_053072, intron 8 of 20) PB1D10|SINE|Alu -31301 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-9 chr7 34233563 34234087 + 0.549429090733244 NA Intergenic Intergenic -3489 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-6 chr2 174415876 174416386 + 0.549429090733244 NA intron (NM_020580, intron 1 of 14) CpG 327 NM_020580 57314 Mm.271709 NM_020580 ENSMUSG00000016253 Nelfcd 2410003I03Rik|C77797|Th1|Th1l negative elongation factor complex member C/D, Th1l protein-coding common_peak2_47_31_0.303820666872006_5.151910333436_0.549429090733244-2 chr2 90940496 90940834 + 0.549429090733244 NA intron (NM_198683, intron 1 of 13) CpG 268 NM_017368 13046 Mm.29495 NM_017368 ENSMUSG00000005506 Celf1 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50 CUGBP, Elav-like family member 1 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-8 chr9 88438347 88438842 + 0.549429090733244 NA intron (NM_001359958, intron 1 of 28) CpG 357 NM_001359958 244962 Mm.439873 NM_172926 ENSMUSG00000032422 Snx14 B830022K16|C330035N22Rik|YR-14 sorting nexin 14 protein-coding common_peak2_48_31_0.333358143366055_5.16667907168303_0.549429090733244-4 chr9 63724723 63725206 + 0.549429090733244 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 33030 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244-4 chr2 32259560 32260034 + 0.549429090733244 NA intron (NM_011675, intron 1 of 6) intron (NM_011675, intron 1 of 6) 308 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak1_48_31_0.333358143366055_5.16667907168303_0.549429090733244-7 chr3 98024934 98025356 + 0.549429090733244 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 11607 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_47_31_0.303820666872006_5.151910333436_0.549429090733244 chr6 34272860 34273612 + 0.549429090733244 NA Intergenic Intergenic 44207 NR_037965 626009 Mm.451 NR_028277 Gm6644 Akr1b3p|EG626009 Akr1b3 pseudogene pseudo common_peak2_126_120_-0.221223615700679_6.80825142942425_0.549409730331405-2 chr5 72914406 72915613 + 0.549409730331405 NA exon (NM_001113423, exon 1 of 8) exon (NM_001113423, exon 1 of 8) 647 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak2_126_120_-0.221223615700679_6.80825142942425_0.549409730331405 chr12 86832655 86833806 + 0.549409730331405 NA Intergenic Intergenic 51584 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_129_91_0.207523158005491_6.62732353505976_0.549281006919574-2 chr6 113690675 113691604 + 0.549281006919574 NA intron (NM_001113553, intron 11 of 11) intron (NM_001113553, intron 11 of 11) -5911 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_129_91_0.207523158005491_6.62732353505976_0.549281006919574 chr4 116650594 116651943 + 0.549281006919574 NA intron (NM_021473, intron 1 of 8) intron (NM_021473, intron 1 of 8) 406 NM_021473 58810 Mm.30085 NM_021473 ENSMUSG00000028692 Akr1a1 2610201A18Rik|Akr1a4 aldo-keto reductase family 1, member A1 (aldehyde reductase) protein-coding common_peak2_110_106_-0.236725622689494_6.6231041750564_0.54928100691955 chr19 32387002 32388486 + 0.54928100691955 NA 5' UTR (NM_001362423, exon 1 of 10) 5' UTR (NM_001362423, exon 1 of 10) 305 NM_001362423 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_164_118_0.177795160697206_6.98371534365655_0.549262650117945 chr8 128653723 128655253 + 0.549262650117945 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -31166 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_143_135_-0.209861551724122_6.98253206538828_0.549262650117945 chr8 47974274 47975693 + 0.549262650117945 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 15568 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_184_133_0.17041849020706_7.1512984355613_0.548927480766874-2 chr15 77148765 77150843 + 0.548927480766874 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 4008 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_184_133_0.17041849020706_7.1512984355613_0.548927480766874 chr14 25485287 25487576 + 0.548927480766874 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 27246 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_96_93_-0.24297829726656_6.43309970304436_0.548750809231233 chr6 6173713 6174628 + 0.548750809231233 NA intron (NM_001177572, intron 3 of 17) intron (NM_001177572, intron 3 of 17) 43003 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_113_79_0.221015982311994_6.43243608604336_0.548750809231233 chr13 113686897 113688033 + 0.548750809231233 NA Intergenic Intergenic -23789 NM_019960 56534 Mm.41410 NM_019960 ENSMUSG00000051456 Hspb3 2310035K17Rik|AI844863|Hsbp3|spb3 heat shock protein 3 protein-coding common_peak1_95_93_-0.257823164378875_6.4256772694882_0.548750809231233 chr1 92831737 92832653 + 0.548750809231233 NA intron (NM_016696, intron 1 of 8) CpG 550 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_113_79_0.221015982311994_6.43243608604336_0.548750809231233 chr15 99771546 99772325 + 0.548750809231233 NA intron (NM_028015, intron 1 of 9) CpG 580 NM_028015 71949 Mm.390821 NM_028015 ENSMUSG00000023021 Cers5 2310081H14Rik|AU045339|AW544927|Lass5|Trh4 ceramide synthase 5 protein-coding common_peak1_250_183_0.150002483464182_7.5985631977891_0.548598430857852 chr3 87985038 87986861 + 0.548598430857852 NA Intergenic Intergenic 14407 NM_007529 12032 Mm.4598 NM_007529 ENSMUSG00000004892 Bcan Cspg7 brevican protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-5 chr19 32904962 32905724 + 0.548322060310103 NA Intergenic Intergenic 147766 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-2 chr11 4895008 4895932 + 0.548322060310103 NA intron (NM_172438, intron 1 of 19) CpG 127 NM_172438 107829 Mm.28969 NM_172438 ENSMUSG00000034274 Thoc5 1700060C24Rik|A430085L24Rik|Fmip|PK1.3|Sgk2 THO complex 5 protein-coding common_peak1_46_49_-0.37019488647267_5.45875874653839_0.548322060310103 chr1 92907036 92907383 + 0.548322060310103 NA exon (NM_175118, exon 1 of 2) exon (NM_175118, exon 1 of 2) 220 NM_175118 67446 Mm.46179 NM_175118 ENSMUSG00000047067 Dusp28 0710001B24Rik|AV005521 dual specificity phosphatase 28 protein-coding common_peak1_46_49_-0.37019488647267_5.45875874653839_0.548322060310103-3 chr5 108065724 108066257 + 0.548322060310103 NA intron (NM_001253880, intron 1 of 12) intron (NM_001253880, intron 1 of 12) 316 NR_152817 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding common_peak2_59_39_0.301549470738522_5.47270283025662_0.548322060310103 chr2 153014813 153015319 + 0.548322060310103 NA intron (NM_178939, intron 1 of 4) intron (NM_178939, intron 1 of 4) 317 NM_178939 68559 Mm.12746 NM_178939 ENSMUSG00000027472 Pdrg1 1110004D19Rik|AU020945|AV006589|Pdrg p53 and DNA damage regulated 1 protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-4 chr13 115089553 115090346 + 0.548322060310103 NA 5' UTR (NM_134058, exon 1 of 2) 5' UTR (NM_134058, exon 1 of 2) 209 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota mRNA surveillance and ribosome rescue factor protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103 chr1 191025474 191026126 + 0.548322060310103 NA non-coding (NR_027298, exon 1 of 2) non-coding (NR_027298, exon 1 of 2) 390 NM_001313747 226844 Mm.134053 NM_198025 ENSMUSG00000066595 Flvcr1 9630055N22Rik|FLVCR|Mfsd7b feline leukemia virus subgroup C cellular receptor 1 protein-coding common_peak1_46_49_-0.37019488647267_5.45875874653839_0.548322060310103-4 chr9 23134747 23135571 + 0.548322060310103 NA Intergenic Intergenic -87917 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-3 chr12 44209508 44210039 + 0.548322060310103 NA promoter-TSS (NR_049203) promoter-TSS (NR_049203) 295 NM_013760 27362 Mm.27432 NM_013760 ENSMUSG00000014905 Dnajb9 AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7 DnaJ heat shock protein family (Hsp40) member B9 protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-6 chr2 72366812 72367733 + 0.548322060310103 NA intron (NM_023057, intron 4 of 19) intron (NM_023057, intron 4 of 19) 81571 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_46_49_-0.37019488647267_5.45875874653839_0.548322060310103 chr1 16665199 16665869 + 0.548322060310103 NA intron (NM_027415, intron 1 of 2) CpG 343 NM_026392 70397 Mm.194225 NM_026392 ENSMUSG00000025940 Tmem70 1110020A09Rik|2210416J16Rik transmembrane protein 70 protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-8 chr5 151367830 151368395 + 0.548322060310103 NA promoter-TSS (NR_045699) promoter-TSS (NR_045699) -563 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak1_46_49_-0.37019488647267_5.45875874653839_0.548322060310103-2 chr11 102284960 102285545 + 0.548322060310103 NA 5' UTR (NM_001302505, exon 1 of 3) 5' UTR (NM_001302505, exon 1 of 3) 313 NM_001302505 72053 Mm.101274 NM_028076 ENSMUSG00000034757 Tmub2 2010008E23Rik transmembrane and ubiquitin-like domain containing 2 protein-coding common_peak2_46_49_-0.37019488647267_5.45875874653839_0.548322060310103-2 chr2 74825559 74826224 + 0.548322060310103 NA promoter-TSS (NM_016804) promoter-TSS (NM_016804) 79 NM_016804 53375 Mm.292613 NM_016804 ENSMUSG00000027099 Mtx2 1500012G02Rik metaxin 2 protein-coding common_peak1_59_39_0.301549470738522_5.47270283025662_0.548322060310103-7 chr4 59388133 59388854 + 0.548322060310103 NA intron (NM_001163288, intron 6 of 16) intron (NM_001163288, intron 6 of 16) 50140 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_299_221_0.13460863888317_7.86172018579169_0.548164996646314 chr18 36513575 36515721 + 0.548164996646314 NA intron (NM_010415, intron 2 of 5) intron (NM_010415, intron 2 of 5) 1157 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_98_68_0.2323221502738_6.22468553191507_0.547637949363094 chr15 93274095 93275166 + 0.547637949363094 NA intron (NM_001346785, intron 1 of 7) intron (NM_001346785, intron 1 of 7) 549 NM_001357006 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak2_98_68_0.2323221502738_6.22468553191507_0.547637949363094 chr12 104056074 104057190 + 0.547637949363094 NA Intergenic Intergenic -12189 NM_026535 68054 Mm.20286 NM_026535 ENSMUSG00000041567 Serpina12 4632419J12Rik serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 protein-coding common_peak1_98_68_0.2323221502738_6.22468553191507_0.547637949363094-2 chr8 11400708 11401803 + 0.547637949363094 NA exon (NM_009932, exon 7 of 48) exon (NM_009932, exon 7 of 48) -76674 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_251_184_0.147878878584034_7.60532089980833_0.547324343436867 chr3 144570504 144571885 + 0.547324343436867 NA promoter-TSS (NM_011828) promoter-TSS (NM_011828) 767 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_166_119_0.182981776418026_6.99838148381753_0.54731282338142 chr11 16806903 16809541 + 0.54731282338142 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 56019 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_147_105_0.188930327347755_6.82238561823708_0.547207979045057 chr8 12753424 12754396 + 0.547207979045057 NA Intergenic Intergenic -3106 NM_015804 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak1_163_152_-0.193483254665458_7.16064621535992_0.547191629146008 chr2 129800686 129801909 + 0.547191629146008 NA non-coding (NR_029452, exon 1 of 1) non-coding (NR_029452, exon 1 of 1) 162 NR_029452 654409 Mm.305555 NR_029452 Stk35os1 4932416H05Rik serine/threonine kinase 35, opposite strand 1 ncRNA common_peak1_71_48_0.269946424984252_5.74968305660733_0.547023400307279-2 chr3 96696752 96697729 + 0.547023400307279 NA intron (NM_001165949, intron 1 of 13) CpG 164 NM_018812 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak2_71_48_0.269946424984252_5.74968305660733_0.547023400307279 chr11 59471985 59472429 + 0.547023400307279 NA intron (NM_178417, intron 1 of 3) CpG 267 NM_178417 237775 Mm.339604 NM_178417 ENSMUSG00000054519 Zfp867 - zinc finger protein 867 protein-coding common_peak2_71_48_0.269946424984252_5.74968305660733_0.547023400307279-2 chr14 120276191 120277036 + 0.547023400307279 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) 944 NM_001360380 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak2_71_48_0.269946424984252_5.74968305660733_0.547023400307279-3 chr2 6212490 6213119 + 0.547023400307279 NA exon (NM_024208, exon 1 of 5) exon (NM_024208, exon 1 of 5) 190 NM_024208 67856 Mm.38342 NM_024208 ENSMUSG00000039063 Echdc3 2310005D12Rik|AI662097 enoyl Coenzyme A hydratase domain containing 3 protein-coding common_peak1_71_48_0.269946424984252_5.74968305660733_0.547023400307279 chr16 31200336 31201126 + 0.547023400307279 NA intron (NM_030138, intron 1 of 22) CpG 507 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak2_58_59_-0.307489510285839_5.7531458404656_0.547023400307267 chr3 41318138 41318834 + 0.547023400307267 NA Intergenic Intergenic 174713 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_58_59_-0.307489510285839_5.7531458404656_0.547023400307267-2 chr5 36226716 36227519 + 0.547023400307267 NA intron (NM_030889, intron 2 of 26) RMER10A|LTR|ERVL 23096 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_58_59_-0.307489510285839_5.7531458404656_0.547023400307267 chr12 87471720 87472255 + 0.547023400307267 NA intron (NM_025507, intron 1 of 13) CpG 312 NM_025507 66354 Mm.271174 NM_025507 ENSMUSG00000021039 Snw1 2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip SNW domain containing 1 protein-coding common_peak1_58_59_-0.307489510285839_5.7531458404656_0.547023400307267-4 chr9 66988260 66989220 + 0.547023400307267 NA Intergenic Intergenic -13256 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak2_57_59_-0.331977574231252_5.74090180849289_0.547023400307267 chr10 23349845 23350907 + 0.547023400307267 NA promoter-TSS (NM_001347372) promoter-TSS (NM_001347372) -433 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_58_59_-0.307489510285839_5.7531458404656_0.547023400307267-3 chr8 95000751 95001663 + 0.547023400307267 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) -16485 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak1_58_59_-0.307489510285839_5.7531458404656_0.547023400307267-2 chr7 19629028 19629402 + 0.547023400307267 NA exon (NM_009046, exon 1 of 11) exon (NM_009046, exon 1 of 11) 223 NM_001290457 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding common_peak2_57_59_-0.331977574231252_5.74090180849289_0.547023400307267-3 chr11 69881540 69882015 + 0.547023400307267 NA promoter-TSS (NM_153143) promoter-TSS (NM_153143) 317 NR_105889 102466208 NR_105889 ENSMUSG00000104996 Mir6924 mmu-mir-6924 microRNA 6924 ncRNA common_peak2_58_59_-0.307489510285839_5.7531458404656_0.547023400307267-3 chr9 15237720 15238992 + 0.547023400307267 NA promoter-TSS (NM_026955) promoter-TSS (NM_026955) -689 NM_026955 69137 Mm.41396 NM_026955 ENSMUSG00000031937 Vstm5 2200002K05Rik V-set and transmembrane domain containing 5 protein-coding common_peak2_57_59_-0.331977574231252_5.74090180849289_0.547023400307267-4 chr14 31018253 31018974 + 0.547023400307267 NA promoter-TSS (NM_001081251) promoter-TSS (NM_001081251) 518 NM_153547 30877 Mm.88512 NM_153547 ENSMUSG00000042354 Gnl3 Ns guanine nucleotide binding protein-like 3 (nucleolar) protein-coding common_peak1_57_59_-0.331977574231252_5.74090180849289_0.547023400307267 chrX 96098008 96099029 + 0.547023400307267 NA intron (NM_010833, intron 1 of 12) B3|SINE|B2 2473 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_57_59_-0.331977574231252_5.74090180849289_0.547023400307267-2 chr11 5788670 5789312 + 0.547023400307267 NA intron (NM_001146309, intron 1 of 12) intron (NM_001146309, intron 1 of 12) 508 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak2_206_150_0.159064787352841_7.3179371330015_0.546912655296165 chr15 13367897 13368817 + 0.546912655296165 NA Intergenic Intergenic -194682 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_183_169_-0.180647593487936_7.31906713939373_0.546912655296165 chr1 75399300 75401252 + 0.546912655296165 NA intron (NM_001173477, intron 1 of 4) intron (NM_001173477, intron 1 of 4) 191 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_111_107_-0.237298367518032_6.63623831840445_0.546781255373177 chr19 8965875 8966862 + 0.546781255373177 NA promoter-TSS (NM_026007) promoter-TSS (NM_026007) -673 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_130_92_0.20290349733436_6.64061055977521_0.546781255373152 chr1 36068575 36070561 + 0.546781255373152 NA intron (NM_015818, intron 1 of 1) intron (NM_015818, intron 1 of 1) 1168 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak2_130_92_0.20290349733436_6.64061055977521_0.546781255373152 chr12 100199634 100200751 + 0.546781255373152 NA promoter-TSS (NM_001313934) promoter-TSS (NM_001313934) 48 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1 calmodulin 1 protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-6 chr6 17495112 17495306 + 0.546772548767014 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 31252 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-5 chr13 31476607 31477040 + 0.546772548767014 NA Intergenic Intergenic -81347 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-8 chr3 96488490 96488695 + 0.546772548767014 NA Intergenic CpG -36286 NM_001256181 329716 Mm.275223 NM_183223 ENSMUSG00000046317 BC107364 D730018G16 cDNA sequence BC107364 protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-8 chr18 61052011 61052323 + 0.546772548767014 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 7017 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-3 chr16 23285130 23285487 + 0.546772548767014 NA intron (NM_001252505, intron 2 of 7) intron (NM_001252505, intron 2 of 7) -5162 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-14 chr2 152888328 152888683 + 0.546772548767014 NA intron (NM_001141975, intron 13 of 17) intron (NM_001141975, intron 13 of 17) -22847 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-5 chr16 10841275 10841727 + 0.546772548767014 NA 3' UTR (NM_001162932, exon 2 of 2) 3' UTR (NM_001162932, exon 2 of 2) 6442 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-12 chr5 112281286 112281525 + 0.546772548767014 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 4714 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-22 chr9 43947726 43948153 + 0.546772548767014 NA Intergenic Intergenic -95445 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-9 chr19 9066138 9066436 + 0.546772548767014 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 21669 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-2 chr5 53589053 53589295 + 0.546772548767014 NA intron (NM_001080928, intron 1 of 10) CpG -1172 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-4 chr12 8808074 8808390 + 0.546772548767014 NA Intergenic Intergenic 36836 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014 chr1 172376024 172376317 + 0.546772548767014 NA promoter-TSS (NM_026234) promoter-TSS (NM_026234) -361 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding common_peak2_22_13_0.442553359311895_4.02863160171355_0.546772548767014-2 chr15 77917739 77917946 + 0.546772548767014 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 11152 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-13 chr2 137757681 137757872 + 0.546772548767014 NA Intergenic Intergenic -498808 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-15 chr4 108357065 108357535 + 0.546772548767014 NA Intergenic Intergenic 26355 NM_001099303 545667 Mm.380025 NM_001099303 ENSMUSG00000059816 Fam159a Shisal2a family with sequence similarity 159, member A protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-2 chr11 108267549 108267867 + 0.546772548767014 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 76180 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014 chr1 133046255 133046515 + 0.546772548767014 NA 5' UTR (NM_001099276, exon 1 of 33) 5' UTR (NM_001099276, exon 1 of 33) 373 NM_001099276 240752 Mm.387308 NM_001099276 ENSMUSG00000026447 Pik3c2b C330011J12Rik|Gm199|PI3K-C2beta|PI3KC2beta phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-5 chr13 23584465 23584861 + 0.546772548767014 NA TTS (NM_001290530) TTS (NM_001290530) 1307 NM_001290530 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-15 chr7 101344858 101345057 + 0.546772548767014 NA intron (NM_019990, intron 5 of 6) intron (NM_019990, intron 5 of 6) -3112 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-3 chr11 102603507 102603836 + 0.546772548767014 NA promoter-TSS (NM_020510) promoter-TSS (NM_020510) -760 NM_020510 57265 Mm.36416 NM_020510 ENSMUSG00000050288 Fzd2 AL033370|AW456835|Fz10|Fzd10|Mfz10|Mfz10a frizzled class receptor 2 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-14 chr3 159847902 159848313 + 0.546772548767014 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 8457 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-10 chr15 99875616 99875929 + 0.546772548767014 NA promoter-TSS (NM_001113545) promoter-TSS (NM_001113545) -316 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding unique_peak2_22_13_0.442553359311895_4.02863160171355_0.546772548767014 chr18 66332560 66332932 + 0.546772548767014 NA Intergenic Intergenic -40908 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-6 chr15 8233518 8233742 + 0.546772548767014 NA intron (NM_001162906, intron 37 of 52) intron (NM_001162906, intron 37 of 52) 64524 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-4 chr17 71003633 71003847 + 0.546772548767014 NA Intergenic Intergenic -1207 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014 chr1 172376031 172376330 + 0.546772548767014 NA promoter-TSS (NM_026234) promoter-TSS (NM_026234) -351 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-10 chr19 57271842 57272321 + 0.546772548767014 NA Intergenic Intergenic -1879 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-2 chr10 108336291 108336764 + 0.546772548767014 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 4338 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-18 chr9 108854216 108854438 + 0.546772548767014 NA 5' UTR (NM_134420, exon 1 of 18) 5' UTR (NM_134420, exon 1 of 18) 284 NM_134420 171429 Mm.45201 NM_134420 ENSMUSG00000023259 Slc26a6 B930010B04Rik|CFEX|Pat-1|Pat1 solute carrier family 26, member 6 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-12 chr2 130696949 130697423 + 0.546772548767014 NA intron (NM_001081162, intron 1 of 20) CpG 333 NM_001081162 269356 Mm.441391 NM_001081162 ENSMUSG00000074796 Slc4a11 AI503023|BTR1|NaBC1 solute carrier family 4, sodium bicarbonate transporter-like, member 11 protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-10 chrX 162990913 162991257 + 0.546772548767014 NA intron (NM_001168571, intron 14 of 16) intron (NM_001168571, intron 14 of 16) -26486 NM_009789 12309 Mm.6891 NM_009789 ENSMUSG00000040808 S100g AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3 S100 calcium binding protein G protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-2 chr11 55405458 55405870 + 0.546772548767014 NA intron (NM_009242, intron 4 of 9) intron (NM_009242, intron 4 of 9) 14416 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-3 chr12 76962692 76963178 + 0.546772548767014 NA promoter-TSS (NM_001146176) promoter-TSS (NM_001146176) -687 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-3 chr11 84080772 84081089 + 0.546772548767014 NA intron (NM_172562, intron 15 of 15) intron (NM_172562, intron 15 of 15) -12573 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding unique_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-3 chr8 11379845 11380125 + 0.546772548767014 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -67159 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-12 chr9 102751886 102752229 + 0.546772548767014 NA intron (NR_033301, intron 3 of 3) intron (NR_033301, intron 3 of 3) 12409 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-9 chr14 25489880 25490212 + 0.546772548767014 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 30861 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-2 chr1 184059295 184059576 + 0.546772548767014 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 25054 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-2 chr11 44950393 44950663 + 0.546772548767014 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 166400 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-4 chr13 6250345 6250812 + 0.546772548767014 NA Intergenic Intergenic -297579 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-20 chr8 39014962 39015381 + 0.546772548767014 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 9326 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-13 chr6 34601633 34601896 + 0.546772548767014 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 3260 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014 chr1 189921620 189921820 + 0.546772548767014 NA intron (NM_026796, intron 1 of 11) intron (NM_026796, intron 1 of 11) 571 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-9 chr8 111338023 111338303 + 0.546772548767014 NA promoter-TSS (NM_029005) promoter-TSS (NM_029005) 42 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-12 chr16 97288278 97288648 + 0.546772548767014 NA Intergenic Intergenic -68265 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding unique_peak2_22_13_0.442553359311895_4.02863160171355_0.546772548767014-2 chr3 54443681 54443956 + 0.546772548767014 NA Intergenic Intergenic 82711 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-10 chr19 5406910 5407104 + 0.546772548767014 NA non-coding (NR_015545, exon 1 of 5) non-coding (NR_015545, exon 1 of 5) 192 NR_027938 74931 Mm.388511 NR_015545 ENSMUSG00000086938 4930481A15Rik - RIKEN cDNA 4930481A15 gene ncRNA common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-17 chr8 31841789 31842075 + 0.546772548767014 NA intron (NM_178591, intron 2 of 8) intron (NM_178591, intron 2 of 8) 76271 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-8 chr13 23575592 23576110 + 0.546772548767014 NA promoter-TSS (NM_178204) promoter-TSS (NM_178204) 88 NM_178204 319149 Mm.347699 NM_178204 ENSMUSG00000099583 Hist1h3d H3-b histone cluster 1, H3d protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-16 chr8 34275939 34276232 + 0.546772548767014 NA Intergenic Intergenic -109373 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-18 chr6 124829155 124829385 + 0.546772548767014 NA promoter-TSS (NM_013538) promoter-TSS (NM_013538) 214 NM_001326594 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-10 chr4 59315447 59315653 + 0.546772548767014 NA intron (NM_001163288, intron 16 of 16) intron (NM_001163288, intron 16 of 16) 55499 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-7 chr7 112681735 112682038 + 0.546772548767014 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 2566 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-9 chr3 145923762 145924019 + 0.546772548767014 NA promoter-TSS (NM_009740) promoter-TSS (NM_009740) -372 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-4 chr12 86241262 86241644 + 0.546772548767014 NA promoter-TSS (NM_001324488) promoter-TSS (NM_001324488) -405 NM_027405 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-7 chr12 112644922 112645199 + 0.546772548767014 NA exon (NM_001161737, exon 1 of 3) exon (NM_001161737, exon 1 of 3) 232 NM_013929 30954 Mm.289812 NM_013929 ENSMUSG00000064326 Siva1 CD27bp|Siva SIVA1, apoptosis-inducing factor protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-18 chr8 126597694 126597980 + 0.546772548767014 NA Intergenic Intergenic -4401 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-8 chr16 38017595 38017865 + 0.546772548767014 NA intron (NR_040565, intron 1 of 3) intron (NR_040565, intron 1 of 3) 407 NR_040565 75175 Mm.399335 NR_040565 4930542C21Rik - RIKEN cDNA 4930542C21 gene ncRNA unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-17 chr6 115602028 115602309 + 0.546772548767014 NA intron (NM_023290, intron 1 of 7) CpG 230 NM_023290 67027 Mm.101316 NM_023290 ENSMUSG00000000439 Mkrn2 2610002L04Rik|C81377 makorin, ring finger protein, 2 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-19 chr7 16601738 16602090 + 0.546772548767014 NA intron (NM_172739, intron 1 of 6) intron (NM_172739, intron 1 of 6) -11910 NR_136928 102634559 Mm.421602 NR_136928 ENSMUSG00000100583 Gm29443 - predicted gene 29443 ncRNA unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-4 chr13 55760896 55761275 + 0.546772548767014 NA intron (NM_028281, intron 2 of 3) intron (NM_028281, intron 2 of 3) -23494 NM_029772 76856 Mm.159795 NM_029772 ENSMUSG00000021499 Catsper3 4921522D01Rik|CACRC cation channel, sperm associated 3 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-16 chr6 72538556 72538803 + 0.546772548767014 NA Intergenic Intergenic -5712 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-11 chr6 82760502 82760779 + 0.546772548767014 NA intron (NM_013820, intron 1 of 17) intron (NM_013820, intron 1 of 17) 13814 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_22_13_0.442553359311895_4.02863160171355_0.546772548767014-3 chr18 52558274 52558586 + 0.546772548767014 NA Intergenic B1_Mus1|SINE|Alu -28563 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-3 chr12 8807926 8808265 + 0.546772548767014 NA Intergenic Intergenic 36699 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-6 chr12 27494136 27494566 + 0.546772548767014 NA Intergenic Intergenic -151633 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-11 chr5 72856797 72857302 + 0.546772548767014 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 11399 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-7 chr16 32667485 32667758 + 0.546772548767014 NA intron (NR_033493, intron 1 of 2) intron (NR_033493, intron 1 of 2) 576 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA unique_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014 chr5 21488889 21489210 + 0.546772548767014 NA intron (NM_001199632, intron 19 of 20) intron (NM_001199632, intron 19 of 20) -54478 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-14 chr7 88940051 88940264 + 0.546772548767014 NA Intergenic Intergenic 398630 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-8 chr8 94981746 94981993 + 0.546772548767014 NA intron (NM_001198894, intron 1 of 13) intron (NM_001198894, intron 1 of 13) -2530 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-19 chr9 22084947 22085311 + 0.546772548767014 NA non-coding (NR_040406, exon 4 of 4) non-coding (NR_040406, exon 4 of 4) 298 NM_001253898 26940 Mm.425568 NM_012029 ENSMUSG00000066839 Ecsit Sitpec ECSIT signalling integrator protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-21 chr8 117224627 117224948 + 0.546772548767014 NA Intergenic Intergenic -32232 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-6 chr18 46958796 46959069 + 0.546772548767014 NA promoter-TSS (NM_178377) promoter-TSS (NM_178377) 56 NM_178377 69456 Mm.210734 NM_178377 ENSMUSG00000042705 Commd10 2310003A05Rik|AU019438|DRWMS2|Tg(Vav1-icre)A2Kio|Vav-cre|Vav-iCre|Vav1-Cre|VavCre COMM domain containing 10 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-7 chr3 68469704 68470221 + 0.546772548767014 NA intron (NM_001282045, intron 1 of 7) RLTR20A4|LTR|ERVK 1779 NM_001282045 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_22_13_0.442553359311895_4.02863160171355_0.546772548767014-4 chr5 90634222 90634743 + 0.546772548767014 NA intron (NM_001310656, intron 1 of 10) intron (NM_001310656, intron 1 of 10) 6045 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-6 chr16 16866039 16866235 + 0.546772548767014 NA Intergenic Intergenic -2152 NM_001190325 16136 Mm.184441 NM_001190325 ENSMUSG00000075370 Igll1 BB139905|Igl-5|Igll|Lambda5 immunoglobulin lambda-like polypeptide 1 protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-7 chr15 36045314 36045618 + 0.546772548767014 NA intron (NM_001195748, intron 19 of 27) intron (NM_001195748, intron 19 of 27) 94934 NM_001195748 626596 Mm.321798 NM_001195748 ENSMUSG00000037627 Rgs22 - regulator of G-protein signalling 22 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-16 chr4 150238944 150239335 + 0.546772548767014 NA intron (NM_023119, intron 1 of 11) intron (NM_023119, intron 1 of 11) 1815 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-13 chr19 25406557 25406898 + 0.546772548767014 NA intron (NM_181404, intron 4 of 13) intron (NM_181404, intron 4 of 13) -98979 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-17 chr9 98434901 98435278 + 0.546772548767014 NA intron (NM_011254, intron 2 of 3) intron (NM_011254, intron 2 of 3) 12128 NM_011254 19659 Mm.279741 NM_011254 ENSMUSG00000046402 Rbp1 CRBPI|Crbp|Rbp-1 retinol binding protein 1, cellular protein-coding common_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-19 chrX 17571107 17571335 + 0.546772548767014 NA intron (NM_001313745, intron 2 of 3) intron (NM_001313745, intron 2 of 3) 786 NM_001313746 72018 Mm.41558 NM_028058 ENSMUSG00000025040 Fundc1 1500005J14Rik|1810033P05Rik FUN14 domain containing 1 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-11 chr2 103668562 103668899 + 0.546772548767014 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 92540 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-5 chr3 121889417 121889681 + 0.546772548767014 NA Intergenic Intergenic -63680 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-11 chr16 25041852 25042094 + 0.546772548767014 NA Intergenic Intergenic -17666 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-9 chr18 38800795 38801301 + 0.546772548767014 NA Intergenic Intergenic -91408 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding unique_peak1_22_13_0.442553359311895_4.02863160171355_0.546772548767014-15 chr4 58825434 58825983 + 0.546772548767014 NA intron (NM_001355696, intron 28 of 48) intron (NM_001355696, intron 28 of 48) -39988 NM_146920 258922 Mm.223327 NM_146920 ENSMUSG00000043385 Olfr267 MOR262-1 olfactory receptor 267 protein-coding common_peak2_22_13_0.442553359311895_4.02863160171355_0.546772548767014 chr14 96519792 96520096 + 0.546772548767014 NA promoter-TSS (NM_053105) promoter-TSS (NM_053105) -910 NM_053105 93688 Mm.308735 NM_053105 ENSMUSG00000022076 Klhl1 mKIAA1490 kelch-like 1 protein-coding common_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014-5 chr12 21316701 21317006 + 0.546772548767014 NA intron (NM_026347, intron 1 of 5) intron (NM_026347, intron 1 of 5) 461 NM_026347 67732 Mm.335830 NM_026347 ENSMUSG00000062054 Iah1 1500019E20Rik|4833421E05Rik isoamyl acetate-hydrolyzing esterase 1 homolog protein-coding unique_peak2_15_19_-0.591888050669567_4.02598406955258_0.546772548767014 chr1 87902094 87902562 + 0.546772548767014 NA intron (NM_177646, intron 3 of 29) intron (NM_177646, intron 3 of 29) -48029 NR_136921 100503175 Mm.426422 NR_136921 ENSMUSG00000101942 Gm19582 - predicted gene, 19582 ncRNA common_peak1_114_80_0.215605218092264_6.44765261193076_0.545897237751491 chr3 158030871 158032037 + 0.545897237751491 NA exon (NM_001093753, exon 1 of 12) exon (NM_001093753, exon 1 of 12) 318 NM_001356997 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak2_114_80_0.215605218092264_6.44765261193076_0.545897237751491-2 chr4 149980199 149981635 + 0.545897237751491 NA 3' UTR (NM_173371, exon 5 of 5) 3' UTR (NM_173371, exon 5 of 5) 22319 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_114_80_0.215605218092264_6.44765261193076_0.545897237751491 chr18 60621743 60622959 + 0.545897237751491 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 1954 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_97_94_-0.243552444538137_6.44807938606188_0.545897237751466 chr16 32858408 32859227 + 0.545897237751466 NA intron (NM_172615, intron 1 of 18) intron (NM_172615, intron 1 of 18) 9549 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak1_85_58_0.256544501274347_6.01091529999901_0.545679753374787-3 chr17 5821906 5822609 + 0.545679753374787 NA Intergenic B4A|SINE|B4 -19123 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak2_70_70_-0.285126377797951_6.00718393060571_0.545679753374787-2 chr6 88924056 88924752 + 0.545679753374787 NA Intergenic Intergenic 22153 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_85_58_0.256544501274347_6.01091529999901_0.545679753374787-4 chr2 165759930 165761221 + 0.545679753374787 NA intron (NM_001271962, intron 10 of 15) intron (NM_001271962, intron 10 of 15) 97598 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_85_58_0.256544501274347_6.01091529999901_0.545679753374787 chr19 3575015 3575707 + 0.545679753374787 NA intron (NM_001360430, intron 1 of 22) CpG 388 NM_001360430 52036 Mm.284686 NM_028999 ENSMUSG00000024908 Ppp6r3 4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558 protein phosphatase 6, regulatory subunit 3 protein-coding common_peak2_70_70_-0.285126377797951_6.00718393060571_0.545679753374787 chr2 30322666 30323989 + 0.545679753374787 NA intron (NM_198304, intron 19 of 43) intron (NM_198304, intron 19 of 43) 35989 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding common_peak1_85_58_0.256544501274347_6.01091529999901_0.545679753374787 chr15 97778454 97779262 + 0.545679753374787 NA Intergenic Intergenic -5507 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak2_84_58_0.239789727155244_6.00253791293946_0.545679753374787-2 chr8 117801381 117801872 + 0.545679753374787 NA intron (NM_001357233, intron 1 of 4) intron (NM_001357233, intron 1 of 4) 348 NM_001357233 68533 Mm.181836 NM_026758 ENSMUSG00000031843 Mphosph6 1110001M01Rik|AA536809|C86426 M phase phosphoprotein 6 protein-coding common_peak2_85_58_0.256544501274347_6.01091529999901_0.545679753374787-2 chr5 135187322 135188125 + 0.545679753374787 NA exon (NM_011714, exon 1 of 19) exon (NM_011714, exon 1 of 19) 400 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak2_84_58_0.239789727155244_6.00253791293946_0.545679753374787 chr11 40733956 40734881 + 0.545679753374787 NA promoter-TSS (NM_013552) promoter-TSS (NM_013552) 757 NM_001290697 52653 Mm.276504 NM_026023 ENSMUSG00000020328 Nudcd2 - NudC domain containing 2 protein-coding common_peak1_84_58_0.239789727155244_6.00253791293946_0.545679753374787 chr15 41712200 41713470 + 0.545679753374787 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -76160 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_70_70_-0.285126377797951_6.00718393060571_0.545679753374787 chr7 98656945 98657570 + 0.545679753374787 NA promoter-TSS (NM_172280) promoter-TSS (NM_172280) -688 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak1_85_58_0.256544501274347_6.01091529999901_0.545679753374787-2 chr15 98952804 98953483 + 0.545679753374787 NA intron (NM_011653, intron 1 of 3) CpG 358 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak1_230_168_0.153735638543215_7.47774725555379_0.545144165214564 chr4 124849570 124851944 + 0.545144165214564 NA promoter-TSS (NM_001142727) promoter-TSS (NM_001142727) -2 NM_153566 230734 Mm.258568 NM_153566 ENSMUSG00000028889 Yrdc AV303379|BC023823|IRIP|ITIP yrdC domain containing (E.coli) protein-coding common_peak1_205_188_-0.17171003873609_7.47638740485303_0.545144165214564 chr15 81191052 81192612 + 0.545144165214564 NA non-coding (NR_015603, exon 2 of 2) non-coding (NR_015603, exon 2 of 2) 979 NR_015603 67638 Mm.390832 NM_026288 ENSMUSG00000047938 4930483J18Rik - RIKEN cDNA 4930483J18 gene ncRNA common_peak2_148_106_0.18503041012412_6.83398219146321_0.545044951333066 chr13 63240105 63241282 + 0.545044951333066 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 664 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_227_207_-0.164550620514978_7.6181644078836_0.544815128180255 chr19 36128642 36130377 + 0.544815128180255 NA Intergenic Intergenic -9665 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_99_69_0.225960865634097_6.24226344976202_0.544363455991957-2 chr14 76774729 76775659 + 0.544363455991957 NA Intergenic Intergenic 15063 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_99_69_0.225960865634097_6.24226344976202_0.544363455991957 chr1 130733963 130734506 + 0.544363455991957 NA intron (NM_177604, intron 1 of 3) intron (NM_177604, intron 1 of 3) 2258 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak2_99_69_0.225960865634097_6.24226344976202_0.544363455991957-2 chr5 149388287 149389564 + 0.544363455991957 NA Intergenic Intergenic -22824 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_99_69_0.225960865634097_6.24226344976202_0.544363455991957 chr5 88720075 88721552 + 0.544363455991957 NA promoter-TSS (NM_026735) promoter-TSS (NM_026735) -58 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak2_83_82_-0.269559714900788_6.24025957389653_0.544363455991957 chr6 94282614 94283737 + 0.544363455991957 NA exon (NM_001286784, exon 1 of 23) exon (NM_001286784, exon 1 of 23) 742 NM_010367 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak1_99_69_0.225960865634097_6.24226344976202_0.544363455991957-3 chr6 113062621 113063610 + 0.544363455991957 NA exon (NM_001355266, exon 6 of 10) exon (NM_001355266, exon 6 of 10) 14129 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak1_131_93_0.198367173573632_6.65377243846445_0.544331390712582 chr6 125164089 125165393 + 0.544331390712582 NA intron (NM_001289726, intron 2 of 6) intron (NM_001289726, intron 2 of 6) 1032 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak2_113_108_-0.225240247577569_6.65556420098814_0.544331390712582 chr16 22265295 22266281 + 0.544331390712582 NA 5' UTR (NM_009186, exon 1 of 9) 5' UTR (NM_009186, exon 1 of 9) 217 NM_001330554 20462 Mm.210352 NM_009186 ENSMUSG00000022858 Tra2b 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta transformer 2 beta protein-coding common_peak1_131_93_0.198367173573632_6.65377243846445_0.544331390712582-2 chr7 84360999 84362781 + 0.544331390712582 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 48148 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_166_154_-0.186252033247693_7.18299838865039_0.543791894686251 chr1 10232098 10233921 + 0.543791894686251 NA promoter-TSS (NM_001102430) promoter-TSS (NM_001102430) -339 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_206_189_-0.172386081653029_7.48366256750443_0.543778973316245 chr8 122230311 122231624 + 0.543778973316245 NA Intergenic Intergenic -51174 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_229_208_-0.158958890677239_7.62787968674226_0.543579605064549 chr8 123101951 123103333 + 0.543579605064549 NA promoter-TSS (NR_028128) promoter-TSS (NR_028128) 292 NM_016738 270106 Mm.319719 NM_016738 ENSMUSG00000000740 Rpl13 A52|L13 ribosomal protein L13 protein-coding common_peak1_168_121_0.176189007983056_7.01883184155441_0.543503707252088 chr13 46726436 46727964 + 0.543503707252088 NA intron (NM_175749, intron 1 of 21) CpG 649 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_115_81_0.210306037185938_6.46270502321105_0.543108728845504 chr11 70654982 70656524 + 0.543108728845504 NA Intergenic CpG-2177 -1103 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak1_98_95_-0.244115893669187_6.46290455388656_0.543108728845504 chr7 28808364 28809546 + 0.543108728845504 NA Intergenic CpG -1935 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak2_98_95_-0.244115893669187_6.46290455388656_0.543108728845504 chr3 138060270 138061576 + 0.543108728845504 NA intron (NR_037975, intron 1 of 3) intron (NR_037975, intron 1 of 3) 6465 NR_037975 329763 Mm.169710 NM_177860 ENSMUSG00000049349 Gm5105 D830013H12|EG329763 predicted gene 5105 ncRNA common_peak2_98_95_-0.244115893669187_6.46290455388656_0.543108728845504-2 chr5 137501602 137502821 + 0.543108728845504 NA intron (NM_028753, intron 1 of 1) intron (NM_028753, intron 1 of 1) 218 NM_028753 74097 Mm.290242 NM_028753 ENSMUSG00000029715 Pop7 0610037N12Rik|AI852017|Rpp20 processing of precursor 7, ribonuclease P family, (S. cerevisiae) protein-coding common_peak2_98_95_-0.244115893669187_6.46290455388656_0.543108728845504-4 chr7 143548277 143549419 + 0.543108728845504 NA promoter-TSS (NM_001285490) promoter-TSS (NM_001285490) -20 NM_001285490 17955 Mm.294625 NM_008672 ENSMUSG00000059119 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 protein-coding common_peak2_115_81_0.210306037185938_6.46270502321105_0.543108728845504 chr15 27465408 27466489 + 0.543108728845504 NA promoter-TSS (NM_020332) promoter-TSS (NM_020332) -729 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_115_81_0.210306037185938_6.46270502321105_0.543108728845504-2 chr13 17212984 17213833 + 0.543108728845504 NA intron (NM_138654, intron 12 of 13) intron (NM_138654, intron 12 of 13) 481357 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_98_95_-0.244115893669187_6.46290455388656_0.543108728845504-3 chr7 81828688 81829895 + 0.543108728845504 NA exon (NM_146193, exon 1 of 8) exon (NM_146193, exon 1 of 8) 140 NM_146193 83962 Mm.439893 NM_146193 ENSMUSG00000025103 Btbd1 1190005H08Rik BTB (POZ) domain containing 1 protein-coding common_peak1_150_107_0.190710402093571_6.85024270321025_0.542919633696583 chr6 71493800 71495051 + 0.542919633696583 NA 5' UTR (NM_001308303, exon 1 of 4) 5' UTR (NM_001308303, exon 1 of 4) 548 NM_001308303 22644 Mm.422969 NM_009543 ENSMUSG00000052656 Rnf103 AW146237|AW212918|Zfp103|kf-1 ring finger protein 103 protein-coding common_peak2_47_50_-0.36860467509949_5.48812300442175_0.542803625802499-2 chr17 84956522 84957333 + 0.542803625802499 NA intron (NM_001159497, intron 1 of 5) intron (NM_001159497, intron 1 of 5) 186 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499-5 chr14 118750258 118750980 + 0.542803625802499 NA Intergenic Intergenic -37252 NM_001160098 58187 Mm.390755 NM_021386 ENSMUSG00000022132 Cldn10 6720456I16Rik|Cldn10a|Cldn10b|D14Ertd728e claudin 10 protein-coding common_peak1_60_40_0.289604064684792_5.50235403696048_0.542803625802499-3 chr13 98263257 98263709 + 0.542803625802499 NA promoter-TSS (NM_178918) promoter-TSS (NM_178918) 407 NM_001271388 68558 Mm.209642 NM_023472 ENSMUSG00000021661 Ankra2 1110004M18Rik|Ankra ankyrin repeat, family A (RFXANK-like), 2 protein-coding common_peak1_48_50_-0.339067198605441_5.50289174266877_0.542803625802499-3 chr17 74395706 74396248 + 0.542803625802499 NA intron (NM_001252478, intron 1 of 13) intron (NM_001252478, intron 1 of 13) 369 NM_144798 210148 Mm.243943 NM_144798 ENSMUSG00000024069 Slc30a6 9530029F08Rik|ZnT6 solute carrier family 30 (zinc transporter), member 6 protein-coding common_peak1_48_50_-0.339067198605441_5.50289174266877_0.542803625802499-2 chr15 81857542 81858146 + 0.542803625802499 NA intron (NM_020507, intron 1 of 1) CpG 482 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak1_60_40_0.289604064684792_5.50235403696048_0.542803625802499-5 chr9 56091022 56091954 + 0.542803625802499 NA intron (NM_011193, intron 1 of 14) MIR3|SINE|MIR 1512 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499-2 chr10 120717746 120718212 + 0.542803625802499 NA Intergenic Intergenic -47753 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_60_40_0.289604064684792_5.50235403696048_0.542803625802499 chr10 127289952 127290409 + 0.542803625802499 NA promoter-TSS (NM_007837) promoter-TSS (NM_007837) -613 NM_007837 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak1_48_50_-0.339067198605441_5.50289174266877_0.542803625802499 chr1 182088553 182089235 + 0.542803625802499 NA Intergenic Intergenic -35843 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499-4 chr14 75753916 75754433 + 0.542803625802499 NA intron (NM_177381, intron 1 of 22) CpG 319 NM_177381 338337 Mm.86507 NM_177381 ENSMUSG00000034893 Cog3 E430004N23 component of oligomeric golgi complex 3 protein-coding common_peak1_60_40_0.289604064684792_5.50235403696048_0.542803625802499-6 chr9 87254762 87255647 + 0.542803625802499 NA intron (NM_199316, intron 1 of 26) intron (NM_199316, intron 1 of 26) 328 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499-7 chr2 145903248 145903680 + 0.542803625802499 NA intron (NM_026425, intron 1 of 5) CpG 223 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding common_peak1_48_50_-0.339067198605441_5.50289174266877_0.542803625802499-6 chr5 32194724 32195342 + 0.542803625802499 NA Intergenic Intergenic -37675 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak2_48_50_-0.339067198605441_5.50289174266877_0.542803625802499 chr2 120403756 120404458 + 0.542803625802499 NA promoter-TSS (NM_001110496) promoter-TSS (NM_001110496) 9 NM_173734 211499 Mm.260712 NM_173734 ENSMUSG00000033808 Tmem87a A930025J12Rik transmembrane protein 87A protein-coding common_peak2_47_50_-0.36860467509949_5.48812300442175_0.542803625802499 chr13 19619061 19619686 + 0.542803625802499 NA exon (NM_134065, exon 1 of 3) exon (NM_134065, exon 1 of 3) 457 NM_134065 105298 Mm.275054 NM_134065 ENSMUSG00000002808 Epdr1 AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1 ependymin related protein 1 (zebrafish) protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499-6 chr15 59386632 59387334 + 0.542803625802499 NA intron (NM_001164604, intron 2 of 4) intron (NM_001164604, intron 2 of 4) 12785 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak1_60_40_0.289604064684792_5.50235403696048_0.542803625802499-2 chr13 45390705 45391568 + 0.542803625802499 NA intron (NM_153789, intron 1 of 6) intron (NM_153789, intron 1 of 6) 1394 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499 chr1 34121564 34121980 + 0.542803625802499 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 4413 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak1_48_50_-0.339067198605441_5.50289174266877_0.542803625802499-5 chr2 74825580 74826305 + 0.542803625802499 NA 5' UTR (NM_016804, exon 1 of 10) 5' UTR (NM_016804, exon 1 of 10) 130 NM_016804 53375 Mm.292613 NM_016804 ENSMUSG00000027099 Mtx2 1500012G02Rik metaxin 2 protein-coding common_peak2_60_40_0.289604064684792_5.50235403696048_0.542803625802499-3 chr11 51688843 51689348 + 0.542803625802499 NA promoter-TSS (NM_025319) promoter-TSS (NM_025319) -461 NM_025319 66050 Mm.35693 NM_025319 ENSMUSG00000007777 0610009B22Rik - RIKEN cDNA 0610009B22 gene protein-coding common_peak1_60_40_0.289604064684792_5.50235403696048_0.542803625802499-4 chr2 68911454 68912080 + 0.542803625802499 NA intron (NM_001347161, intron 1 of 10) intron (NM_001347161, intron 1 of 10) 50326 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_47_50_-0.36860467509949_5.48812300442175_0.542803625802499-3 chr5 123720472 123721360 + 0.542803625802499 NA exon (NM_027494, exon 1 of 14) exon (NM_027494, exon 1 of 14) 128 NM_027494 70650 Mm.279427 NM_027494 ENSMUSG00000029427 Zcchc8 5730565F05Rik zinc finger, CCHC domain containing 8 protein-coding common_peak1_48_50_-0.339067198605441_5.50289174266877_0.542803625802499-4 chr17 80772852 80773560 + 0.542803625802499 NA Intergenic Intergenic -45181 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-4 chr4 81442599 81443147 + 0.542588322087496 NA promoter-TSS (NM_010820) promoter-TSS (NM_010820) -58 NM_001305284 17475 Mm.153039 NM_010820 ENSMUSG00000028402 Mpdz AI225843|B930003D11Rik|MUPP1 multiple PDZ domain protein protein-coding common_peak2_38_41_-0.385943646096192_5.19934559973066_0.542588322087496 chr12 29933928 29934379 + 0.542588322087496 NA Intergenic Intergenic -3883 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak2_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-5 chr5 104399746 104400323 + 0.542588322087496 NA Intergenic Intergenic -35077 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-2 chr12 104064037 104064412 + 0.542588322087496 NA Intergenic Intergenic -13735 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak1_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-3 chr17 24162818 24163330 + 0.542588322087496 NA TTS (NM_001361535) TTS (NM_001361535) 659 NM_172935 245847 Mm.87319 NM_172935 ENSMUSG00000036820 Amdhd2 5730457F11Rik amidohydrolase domain containing 2 protein-coding common_peak2_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-4 chr4 117133506 117133955 + 0.542588322087496 NA exon (NM_013807, exon 1 of 15) exon (NM_013807, exon 1 of 15) 233 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo like kinase 3 protein-coding common_peak1_38_41_-0.385943646096192_5.19934559973066_0.542588322087496 chr10 17108180 17108882 + 0.542588322087496 NA Intergenic Intergenic -12749 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-2 chr10 81997002 81997310 + 0.542588322087496 NA Intergenic CpG -50967 NM_001319203 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding common_peak2_38_41_-0.385943646096192_5.19934559973066_0.542588322087496-3 chr13 13590361 13591008 + 0.542588322087496 NA intron (NM_010748, intron 1 of 52) CpG 275 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak2_49_32_0.317904742793855_5.20334649075538_0.542588322087489 chr1 89123632 89124113 + 0.542588322087489 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 53457 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_49_32_0.317904742793855_5.20334649075538_0.542588322087489-3 chr9 44881711 44882204 + 0.542588322087489 NA promoter-TSS (NM_001357549) promoter-TSS (NM_001357549) -683 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding unique_peak1_49_32_0.317904742793855_5.20334649075538_0.542588322087489 chr3 97007478 97008149 + 0.542588322087489 NA Intergenic Intergenic -24589 NM_001271628 14613 Mm.281816 NM_008121 ENSMUSG00000057123 Gja5 5730555N10Rik|Cnx40|Cx40|Gja-5 gap junction protein, alpha 5 protein-coding common_peak1_49_32_0.317904742793855_5.20334649075538_0.542588322087489-2 chr8 119437290 119437721 + 0.542588322087489 NA intron (NM_027950, intron 1 of 5) intron (NM_027950, intron 1 of 5) 343 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_49_32_0.317904742793855_5.20334649075538_0.542588322087489-3 chr16 13386796 13387454 + 0.542588322087489 NA intron (NM_153588, intron 6 of 14) intron (NM_153588, intron 6 of 14) 28704 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_49_32_0.317904742793855_5.20334649075538_0.542588322087489-2 chr10 71122883 71123610 + 0.542588322087489 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 36444 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_49_32_0.317904742793855_5.20334649075538_0.542588322087489 chr18 65431013 65431555 + 0.542588322087489 NA exon (NM_172833, exon 1 of 16) exon (NM_172833, exon 1 of 16) 287 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak2_59_60_-0.307259771937002_5.77710745159439_0.542494191925768-2 chr4 150373708 150374855 + 0.542494191925768 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 92365 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak2_59_60_-0.307259771937002_5.77710745159439_0.542494191925768 chr16 15194506 15195259 + 0.542494191925768 NA Intergenic Intergenic 288236 NM_025769 66793 Mm.100270 NM_025769 ENSMUSG00000068617 Efcab1 4930449A16Rik|5430404L10Rik EF-hand calcium binding domain 1 protein-coding common_peak2_59_60_-0.307259771937002_5.77710745159439_0.542494191925768-3 chr7 79349132 79349954 + 0.542494191925768 NA intron (NM_018811, intron 6 of 10) intron (NM_018811, intron 6 of 10) 37484 NM_020599 19771 Mm.41653 NM_020599 ENSMUSG00000039194 Rlbp1 3110056M11Rik|CRALBP retinaldehyde binding protein 1 protein-coding common_peak1_72_49_0.260559245791202_5.77413581267033_0.542494191925743-3 chr6 93657566 93658212 + 0.542494191925743 NA Intergenic Intergenic 255074 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak1_72_49_0.260559245791202_5.77413581267033_0.542494191925743-4 chr8 24431985 24432671 + 0.542494191925743 NA Intergenic Intergenic 6618 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_72_49_0.260559245791202_5.77413581267033_0.542494191925743-2 chr19 5023473 5024339 + 0.542494191925743 NA promoter-TSS (NM_007854) promoter-TSS (NM_007854) -100 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding common_peak1_72_49_0.260559245791202_5.77413581267033_0.542494191925743 chr1 124486713 124487898 + 0.542494191925743 NA Intergenic Intergenic -441746 NM_199021 269109 Mm.417716 NM_199021 ENSMUSG00000036815 Dpp10 6430601K09Rik|DPP X|Dprp3 dipeptidylpeptidase 10 protein-coding common_peak1_72_49_0.260559245791202_5.77413581267033_0.542494191925743-2 chr2 31768901 31770139 + 0.542494191925743 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 9347 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_72_49_0.260559245791202_5.77413581267033_0.542494191925743 chr15 62322894 62323951 + 0.542494191925743 NA Intergenic Intergenic -103971 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_72_49_0.260559245791202_5.77413581267033_0.542494191925743-3 chr2 69897338 69897734 + 0.542494191925743 NA exon (NM_001303033, exon 1 of 39) exon (NM_001303033, exon 1 of 39) 290 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding common_peak2_132_94_0.193911916215085_6.66681156643849_0.541929932969571-2 chr19 7382498 7383051 + 0.541929932969571 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -229 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA common_peak2_132_94_0.193911916215085_6.66681156643849_0.541929932969571 chr15 53113227 53114334 + 0.541929932969571 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 232403 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_114_109_-0.225904492547771_6.66840746725077_0.541929932969546 chr16 17722014 17722948 + 0.541929932969546 NA intron (NM_001285886, intron 1 of 16) intron (NM_001285886, intron 1 of 16) 419 NM_001285886 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak1_71_71_-0.285268732342852_6.02729063527089_0.541905078033632-2 chr6 37870829 37871689 + 0.541905078033632 NA exon (NM_001272064, exon 1 of 19) exon (NM_001272064, exon 1 of 19) 448 NM_145076 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak1_71_71_-0.285268732342852_6.02729063527089_0.541905078033632 chr4 63052748 63053836 + 0.541905078033632 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 87718 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_71_71_-0.285268732342852_6.02729063527089_0.541905078033632 chr13 33004259 33005731 + 0.541905078033632 NA intron (NM_009256, intron 1 of 6) intron (NM_009256, intron 1 of 6) 454 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_71_71_-0.285268732342852_6.02729063527089_0.541905078033632-2 chr8 84832034 84832788 + 0.541905078033632 NA promoter-TSS (NR_033145) promoter-TSS (NR_033145) 129 NM_183358 102060 Mm.489649 NM_183358 ENSMUSG00000033751 Gadd45gip1 2310040G17Rik|AI425883|Crif1|MRP-L59|Plinp1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 protein-coding common_peak2_86_59_0.248858027996202_6.03131960960662_0.54190507803362 chr15 66843216 66844019 + 0.54190507803362 NA intron (NM_009375, intron 45 of 47) intron (NM_009375, intron 45 of 47) -11788 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_86_59_0.248858027996202_6.03131960960662_0.54190507803362-2 chr5 110230500 110231486 + 0.54190507803362 NA promoter-TSS (NM_001253814) promoter-TSS (NM_001253814) -11 NM_001253814 71782 Mm.288442 NM_027922 ENSMUSG00000029501 Ankle2 1110001J12Rik|AI661024|D5Ertd585e ankyrin repeat and LEM domain containing 2 protein-coding common_peak1_148_139_-0.2027856204197_7.02789020673512_0.541643026310195 chr3 86141676 86142561 + 0.541643026310195 NA intron (NM_016959, intron 1 of 5) intron (NM_016959, intron 1 of 5) 550 NM_016959 20091 Mm.391785 NM_016959 ENSMUSG00000028081 Rps3a1 Rps3a ribosomal protein S3A1 protein-coding common_peak2_29_33_-0.45693029605121_4.85899769322473_0.541406350295756 chr11 8658781 8659319 + 0.541406350295756 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 5485 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-3 chr12 69985509 69986089 + 0.541406350295756 NA intron (NM_022028, intron 1 of 4) intron (NM_022028, intron 1 of 4) 1203 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak1_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-2 chr1 136415261 136415577 + 0.541406350295756 NA promoter-TSS (NR_024328) promoter-TSS (NR_024328) 100 NR_024328 320054 Mm.208000 NR_024328 ENSMUSG00000097403 9230116N13Rik - RIKEN cDNA 9230116N13 gene ncRNA common_peak2_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-4 chr18 16741316 16741938 + 0.541406350295756 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 67619 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak2_29_33_-0.45693029605121_4.85899769322473_0.541406350295756 chr18 61091906 61092299 + 0.541406350295756 NA Intergenic Intergenic -13470 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-8 chr5 91988295 91988839 + 0.541406350295756 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 1094 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding common_peak1_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-4 chr5 148756931 148757177 + 0.541406350295756 NA Intergenic Intergenic 15214 NR_028285 70138 Mm.417834 NR_028285 ENSMUSG00000086494 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene ncRNA common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-5 chr17 15564522 15564770 + 0.541406350295756 NA Intergenic Intergenic -1323 NM_144809 213389 Mm.215162 NM_144809 ENSMUSG00000051977 Prdm9 BC012016|Dsbc1|G1-419-29|Meisetz|PRDM9-B|Rcr1|repro7 PR domain containing 9 protein-coding common_peak2_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-5 chr2 30759354 30759837 + 0.541406350295756 NA Intergenic Intergenic 38385 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-4 chr14 104522049 104522583 + 0.541406350295756 NA intron (NM_026047, intron 1 of 5) CpG 350 NM_026047 72486 Mm.291811 NM_026047 ENSMUSG00000022120 Rnf219 2610206B13Rik|2810449K13Rik|AI451544 ring finger protein 219 protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756 chr10 77975998 77976455 + 0.541406350295756 NA Intergenic Intergenic -2424 NM_026431 67884 Mm.297512 NM_026431 ENSMUSG00000020284 1810043G02Rik AV026620|D10Jhu13e RIKEN cDNA 1810043G02 gene protein-coding common_peak2_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-2 chr12 76529322 76529699 + 0.541406350295756 NA Intergenic Intergenic 3702 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-9 chr6 146905131 146906002 + 0.541406350295756 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 17072 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-6 chr17 82905399 82905867 + 0.541406350295756 NA Intergenic Intergenic 172592 NR_045094 100503434 Mm.187281 NR_045094 Gm19689 - predicted gene, 19689 ncRNA common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-2 chr11 94327475 94327808 + 0.541406350295756 NA promoter-TSS (NM_146024) promoter-TSS (NM_146024) -360 NM_027799 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak2_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-3 chr15 58379368 58379660 + 0.541406350295756 NA intron (NM_027211, intron 1 of 8) intron (NM_027211, intron 1 of 8) 9760 NM_027211 69787 Mm.237985 NM_027211 Anxa13 1810034H17Rik|AV055219 annexin A13 protein-coding common_peak1_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-3 chr10 58497978 58498383 + 0.541406350295756 NA intron (NM_001162956, intron 1 of 15) CpG 243 NM_001162956 76138 Mm.211744 NM_001162956 ENSMUSG00000038010 Ccdc138 6230424H07Rik|BC042726 coiled-coil domain containing 138 protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-6 chr2 119034900 119035496 + 0.541406350295756 NA exon (NM_173450, exon 1 of 3) exon (NM_173450, exon 1 of 3) 408 NM_173450 271842 Mm.33617 NM_173450 ENSMUSG00000027324 Rpusd2 4921503C21Rik|9630001E10|BB231107 RNA pseudouridylate synthase domain containing 2 protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-7 chr3 67463270 67463829 + 0.541406350295756 NA intron (NM_016753, intron 1 of 5) intron (NM_016753, intron 1 of 5) 358 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding unique_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-2 chr7 134110393 134110815 + 0.541406350295756 NA intron (NM_007400, intron 3 of 22) intron (NM_007400, intron 3 of 22) 114493 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_29_33_-0.45693029605121_4.85899769322473_0.541406350295756 chr1 135937883 135938367 + 0.541406350295756 NA Intergenic Intergenic -18918 NM_019645 18772 Mm.4494 NM_019645 ENSMUSG00000026413 Pkp1 - plakophilin 1 protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756 chr11 51584343 51584616 + 0.541406350295756 NA promoter-TSS (NM_028398) promoter-TSS (NM_028398) -278 NM_028398 72947 Mm.256875 NM_028398 ENSMUSG00000020359 Phykpl 2900006B13Rik|Agxt2l2 5-phosphohydroxy-L-lysine phospholyase protein-coding common_peak1_29_33_-0.45693029605121_4.85899769322473_0.541406350295756-5 chr8 106530210 106530654 + 0.541406350295756 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 19580 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-10 chr7 28435748 28436031 + 0.541406350295756 NA intron (NM_175021, intron 1 of 12) CpG 302 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-3 chr14 61556337 61556679 + 0.541406350295756 NA intron (NM_001310603, intron 1 of 3) CpG 378 NM_025697 66674 Mm.282706 NM_025697 ENSMUSG00000021930 Spryd7 6330409N04Rik|Clld6 SPRY domain containing 7 protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-11 chr9 58253324 58253659 + 0.541406350295756 NA intron (NR_028146, intron 1 of 7) intron (NR_028146, intron 1 of 7) 327 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-9 chr8 122173248 122173448 + 0.541406350295756 NA Intergenic Intergenic -108793 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-4 chr14 63132013 63132343 + 0.541406350295756 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 9716 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-2 chr11 107548173 107548530 + 0.541406350295756 NA intron (NM_198298, intron 1 of 31) CpG-2765 391 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-8 chr3 105686829 105687329 + 0.541406350295756 NA intron (NM_017397, intron 1 of 10) CpG 492 NM_017397 53975 Mm.272826 NM_017397 ENSMUSG00000027905 Ddx20 GEMIN3|dp103 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 protein-coding common_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756-5 chr17 33289652 33290080 + 0.541406350295756 NA intron (NM_001142957, intron 1 of 3) intron (NM_001142957, intron 1 of 3) 322 NM_001142957 100043468 Mm.276296 NM_001142957 ENSMUSG00000096910 Zfp955b A430003O12Rik|C430039G02Rik|C530035A18Rik|Gm4455|Zfp883b zinc finger protein 955B protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-7 chr2 150904224 150904544 + 0.541406350295756 NA exon (NM_024465, exon 1 of 13) exon (NM_024465, exon 1 of 13) 347 NM_024465 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding unique_peak1_39_25_0.342202245257338_4.87154084076976_0.541406350295756 chr19 55423508 55424012 + 0.541406350295756 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 107703 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak2_39_25_0.342202245257338_4.87154084076976_0.541406350295756-10 chr9 96789560 96789909 + 0.541406350295756 NA Intergenic L2c|LINE|L2 24172 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_85_83_-0.253129872142572_6.26575248670748_0.541174885372638 chr9 57434117 57435092 + 0.541174885372638 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 5132 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_84_83_-0.269884646261675_6.25737509964792_0.541174885372638-2 chr13 37826340 37827371 + 0.541174885372638 NA promoter-TSS (NR_033615) promoter-TSS (NR_033615) -57 NM_001177868 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_101_70_0.233864360485979_6.26667929974767_0.541174885372638 chr11 119603014 119603866 + 0.541174885372638 NA 5' UTR (NM_001306081, exon 1 of 33) 5' UTR (NM_001306081, exon 1 of 33) 535 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_84_83_-0.269884646261675_6.25737509964792_0.541174885372638 chr12 35534011 35535016 + 0.541174885372638 NA intron (NM_001314027, intron 1 of 9) CpG 476 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding common_peak1_484_423_-0.110762960544729_8.67253897429083_0.540584611507539 chr5 32135966 32139760 + 0.540584611507539 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 1391 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_99_96_-0.244668959608064_6.4775783623831_0.54038308013283 chr10 24591439 24592398 + 0.54038308013283 NA Intergenic Intergenic -3524 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_259_190_0.146601306453511_7.6507294812625_0.539947085077934 chr19 4211314 4212767 + 0.539947085077934 NA Intergenic Intergenic -2198 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak2_232_211_-0.160956020008872_7.64744244455876_0.539947085077885 chr6 72898336 72900642 + 0.539947085077885 NA promoter-TSS (NM_001347231) promoter-TSS (NM_001347231) -197 NM_001347231 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak2_134_95_0.200186269359638_6.68505563540097_0.539575460195755-2 chr3 100685151 100686413 + 0.539575460195755 NA promoter-TSS (NM_010763) promoter-TSS (NM_010763) -309 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak2_134_95_0.200186269359638_6.68505563540097_0.539575460195755 chr19 9978738 9979821 + 0.539575460195755 NA Intergenic Intergenic -1321 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_115_110_-0.226557824546084_6.68113695407706_0.53957546019573 chr8 95806470 95807423 + 0.53957546019573 NA non-coding (NR_015574, exon 1 of 4) non-coding (NR_015574, exon 1 of 4) 116 NR_015574 319960 Mm.386996 NR_015574 ENSMUSG00000074136 4930513N10Rik - RIKEN cDNA 4930513N10 gene ncRNA common_peak2_669_576_-0.0923825309709478_9.12623624316001_0.539211656619883 chr12 76532767 76537550 + 0.539211656619883 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 1598 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-10 chr13 74350612 74350910 + 0.53895475198017 NA promoter-TSS (NM_023281) promoter-TSS (NM_023281) 444 NM_001168658 67433 Mm.101586 NM_024201 ENSMUSG00000021578 Ccdc127 0610011N22Rik|5430420E17Rik|A430066A18|AI256405|AW050060|C130002N06 coiled-coil domain containing 127 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-33 chr6 34497843 34498081 + 0.53895475198017 NA intron (NM_007563, intron 2 of 2) intron (NM_007563, intron 2 of 2) 21606 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-5 chr14 70560148 70560459 + 0.53895475198017 NA intron (NM_021877, intron 6 of 19) intron (NM_021877, intron 6 of 19) 6247 NM_021877 15460 Mm.7598 NM_021877 ENSMUSG00000022096 Hr ALUNC|AU|N|ba|bldy|hr|rh|rh-bmh|rhino hairless protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-21 chr5 13470497 13470890 + 0.53895475198017 NA intron (NM_001243073, intron 4 of 17) intron (NM_001243073, intron 4 of 17) 71384 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-3 chr4 11323125 11323364 + 0.53895475198017 NA Intergenic Intergenic -1113 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-9 chr12 31950667 31950866 + 0.53895475198017 NA promoter-TSS (NM_001361928) promoter-TSS (NM_001361928) -521 NM_001361928 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-16 chr16 57673764 57674131 + 0.53895475198017 NA intron (NM_007739, intron 2 of 3) intron (NM_007739, intron 2 of 3) -67080 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-8 chr6 57535902 57536093 + 0.53895475198017 NA promoter-TSS (NM_175523) promoter-TSS (NM_175523) -571 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding unique_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-2 chr6 82125828 82126143 + 0.53895475198017 NA Intergenic ORR1B2|LTR|ERVL-MaLR 84357 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017 chr1 77513374 77513575 + 0.53895475198017 NA intron (NM_007936, intron 1 of 17) intron (NM_007936, intron 1 of 17) 1614 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-2 chr3 105800272 105800483 + 0.53895475198017 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 1004 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein 1a protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-44 chr9 40448895 40449103 + 0.53895475198017 NA intron (NM_001357617, intron 1 of 20) intron (NM_001357617, intron 1 of 20) 6765 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017 chr1 155095521 155095747 + 0.53895475198017 NA TTS (NM_010500) TTS (NM_010500) 4002 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-30 chr5 112282856 112283114 + 0.53895475198017 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 6294 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-24 chr19 28636768 28637091 + 0.53895475198017 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -41295 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-8 chr7 127935788 127935997 + 0.53895475198017 NA exon (NM_001319147, exon 9 of 15) exon (NM_001319147, exon 9 of 15) -5779 NM_133351 76560 Mm.5875 NM_133351 ENSMUSG00000030800 Prss8 2410039E18Rik|AI313909|C79772|CAP1|fr|mCAP1 protease, serine 8 (prostasin) protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-11 chr12 80103295 80103511 + 0.53895475198017 NA Intergenic Intergenic 9610 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-4 chr10 4075837 4076074 + 0.53895475198017 NA intron (NM_001170785, intron 20 of 27) intron (NM_001170785, intron 20 of 27) 102880 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-28 chr9 14395621 14395870 + 0.53895475198017 NA Intergenic Intergenic -14503 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-26 chr2 160745195 160745425 + 0.53895475198017 NA intron (NM_021280, intron 2 of 33) intron (NM_021280, intron 2 of 33) 14000 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-4 chr14 33360029 33360251 + 0.53895475198017 NA intron (NM_153800, intron 6 of 10) intron (NM_153800, intron 6 of 10) 50884 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-38 chr8 6814280 6814557 + 0.53895475198017 NA Intergenic Intergenic -1709131 NM_011388 20494 Mm.3500 NM_011388 ENSMUSG00000023073 Slc10a2 9130221J18Rik|AI605518|ASBT|IBAT|ISBT solute carrier family 10, member 2 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-31 chr5 136564077 136564412 + 0.53895475198017 NA intron (NM_001291238, intron 1 of 22) intron (NM_001291238, intron 1 of 22) 1737 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-2 chr7 142089485 142089739 + 0.53895475198017 NA intron (NM_008748, intron 2 of 6) intron (NM_008748, intron 2 of 6) 5672 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-14 chrX 12091614 12091830 + 0.53895475198017 NA intron (NM_001168321, intron 1 of 13) CpG -11169 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-5 chr18 60716671 60716961 + 0.53895475198017 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 10750 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-7 chr11 19849719 19849931 + 0.53895475198017 NA Intergenic Intergenic -74617 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-19 chr17 46553924 46554242 + 0.53895475198017 NA promoter-TSS (NR_105942) promoter-TSS (NR_105942) -194 NR_105942 102466778 NR_105942 ENSMUSG00000106514 Mir6976 mmu-mir-6976 microRNA 6976 ncRNA unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-43 chr8 126555664 126555952 + 0.53895475198017 NA Intergenic Intergenic 37628 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-24 chr7 82174992 82175208 + 0.53895475198017 NA intron (NM_001277954, intron 1 of 8) CpG 304 NM_001277954 20408 Mm.736 NM_017400 ENSMUSG00000030638 Sh3gl3 EEN-B2|SH3P13|Sh3d2c|Sh3d2c2 SH3-domain GRB2-like 3 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-11 chr8 111338520 111338771 + 0.53895475198017 NA promoter-TSS (NM_029005) promoter-TSS (NM_029005) -440 NM_029005 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-2 chr10 19188162 19188464 + 0.53895475198017 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 21075 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-8 chr2 32713803 32714131 + 0.53895475198017 NA promoter-TSS (NR_039536) promoter-TSS (NR_039536) -995 NR_039536 100628606 NR_039536 ENSMUSG00000105841 Mir3960 mmu-mir-3960 microRNA 3960 ncRNA unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-2 chr1 183144939 183145186 + 0.53895475198017 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 2495 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-42 chr8 126533112 126533506 + 0.53895475198017 NA Intergenic Intergenic -58244 NM_001159907 212728 Mm.482479 NM_001159907 ENSMUSG00000090290 Tarbp1 Gm17296|Gm179 TAR RNA binding protein 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-35 chr7 106239152 106239380 + 0.53895475198017 NA Intergenic Intergenic -23926 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-46 chrX 93731382 93731654 + 0.53895475198017 NA intron (NM_211138, intron 5 of 7) intron (NM_211138, intron 5 of 7) 56406 NM_211138 236899 Mm.166467 NM_177546 ENSMUSG00000035246 Pcyt1b AW045697|CTTbeta phosphate cytidylyltransferase 1, choline, beta isoform protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-12 chr17 78324179 78324394 + 0.53895475198017 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 93866 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-3 chr5 100569661 100569872 + 0.53895475198017 NA intron (NM_139198, intron 1 of 4) intron (NM_139198, intron 1 of 4) 2439 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-3 chr13 51310161 51310419 + 0.53895475198017 NA Intergenic Intergenic -98328 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-8 chr11 96318811 96319273 + 0.53895475198017 NA exon (NM_010459, exon 1 of 2) exon (NM_010459, exon 1 of 2) 775 NM_010459 15412 Mm.3546 NM_010459 ENSMUSG00000038692 Hoxb4 Hox-2.6 homeobox B4 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-13 chr18 38097821 38098036 + 0.53895475198017 NA Intergenic Intergenic -98959 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-23 chr19 25415301 25415530 + 0.53895475198017 NA intron (NM_181404, intron 5 of 13) intron (NM_181404, intron 5 of 13) -90291 NM_015826 50796 Mm.391208 NM_015826 ENSMUSG00000024837 Dmrt1 - doublesex and mab-3 related transcription factor 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-32 chr5 143058705 143059000 + 0.53895475198017 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 54168 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-28 chr4 118135251 118135441 + 0.53895475198017 NA promoter-TSS (NM_001161774) promoter-TSS (NM_001161774) -400 NM_001161774 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-10 chr8 95150289 95150533 + 0.53895475198017 NA Intergenic Intergenic -7871 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-14 chr15 56833470 56833684 + 0.53895475198017 NA Intergenic Intergenic -139031 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-18 chr2 153436195 153436503 + 0.53895475198017 NA intron (NM_001134300, intron 4 of 10) intron (NM_001134300, intron 4 of 10) 8130 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-22 chr18 84851461 84851720 + 0.53895475198017 NA exon (NM_025797, exon 1 of 5) exon (NM_025797, exon 1 of 5) 252 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-10 chr7 84331705 84331996 + 0.53895475198017 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 78188 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-12 chr9 41937575 41937846 + 0.53895475198017 NA Intergenic Intergenic 139503 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-29 chr5 72559978 72560226 + 0.53895475198017 NA promoter-TSS (NM_133921) promoter-TSS (NM_133921) -457 NM_133921 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-6 chr10 82698629 82698838 + 0.53895475198017 NA promoter-TSS (NM_001081218) promoter-TSS (NM_001081218) -274 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838|fkls host cell factor C2 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-6 chr16 92905282 92905566 + 0.53895475198017 NA Intergenic Intergenic -79350 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-14 chr18 52640110 52640351 + 0.53895475198017 NA TTS (NM_025749) TTS (NM_025749) -5990 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding unique_peak1_10_14_-0.71360523386497_3.55008797867603_0.53895475198017 chr11 55420061 55420250 + 0.53895475198017 NA promoter-TSS (NM_001290817) promoter-TSS (NM_001290817) -75 NM_001290817 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-6 chr7 82335612 82335820 + 0.53895475198017 NA promoter-TSS (NM_001190374) promoter-TSS (NM_001190374) 22 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-3 chr1 193415790 193416083 + 0.53895475198017 NA Intergenic Intergenic -45654 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-17 chr17 26503803 26504035 + 0.53895475198017 NA Intergenic Intergenic 4553 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-2 chr10 77200882 77201085 + 0.53895475198017 NA Intergenic Intergenic -34453 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-41 chr8 111721591 111722088 + 0.53895475198017 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 10297 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-12 chr14 20803749 20803968 + 0.53895475198017 NA Intergenic Intergenic 9619 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-5 chr10 22158617 22158841 + 0.53895475198017 NA intron (NM_001359809, intron 1 of 7) CpG 120 NM_009016 19368 Mm.458004 NM_009016 Raet1a RAE-1alpha|Rae1alpha|Raet1 retinoic acid early transcript 1, alpha protein-coding common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-7 chr7 97081245 97081464 + 0.53895475198017 NA promoter-TSS (NM_010248) promoter-TSS (NM_010248) -397 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-9 chr7 143739194 143739397 + 0.53895475198017 NA intron (NM_024289, intron 1 of 21) intron (NM_024289, intron 1 of 21) 1065 NM_001199227 79196 Mm.21199 NM_024289 ENSMUSG00000037606 Osbpl5 1110006M06Rik|AI462538|ORP5|Obph1|Osbp2 oxysterol binding protein-like 5 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-15 chr18 69654956 69655212 + 0.53895475198017 NA intron (NM_001361128, intron 14 of 19) intron (NM_001361128, intron 14 of 19) -270475 NM_201362 381175 Mm.266831 NM_201362 ENSMUSG00000038903 Ccdc68 BC046343 coiled-coil domain containing 68 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-25 chr7 142481636 142481845 + 0.53895475198017 NA intron (NM_001271523, intron 1 of 10) intron (NM_001271523, intron 1 of 10) 4727 NM_001271523 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-20 chr4 148000624 148000867 + 0.53895475198017 NA promoter-TSS (NM_008725) promoter-TSS (NM_008725) 23 NM_008725 230899 Mm.482123 NM_008725 ENSMUSG00000041616 Nppa ANP|Anf|Pnd natriuretic peptide type A protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-6 chr18 60727328 60727637 + 0.53895475198017 NA promoter-TSS (NM_001348103) promoter-TSS (NM_001348103) 84 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017 chr1 16179668 16179927 + 0.53895475198017 NA Intergenic Intergenic 73915 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-4 chr10 61147328 61147616 + 0.53895475198017 NA intron (NM_001316674, intron 1 of 14) CpG 212 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017 chr1 160900391 160900659 + 0.53895475198017 NA Intergenic Intergenic -5886 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-37 chr7 141413596 141413910 + 0.53895475198017 NA intron (NM_172116, intron 1 of 7) intron (NM_172116, intron 1 of 7) 372 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Gatd1 BC023835|D230016J19Rik|Pddc1 glutamine amidotransferase like class 1 domain containing 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-6 chr10 81146081 81146372 + 0.53895475198017 NA intron (NM_010731, intron 2 of 2) intron (NM_010731, intron 2 of 2) 9955 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-2 chr1 172197601 172197811 + 0.53895475198017 NA 3' UTR (NM_001329869, exon 4 of 4) 3' UTR (NM_001329869, exon 4 of 4) 9098 NM_001329871 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-3 chr15 80137640 80137845 + 0.53895475198017 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 4588 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding unique_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017 chr17 12326195 12326435 + 0.53895475198017 NA non-coding (NR_045290, exon 2 of 2) non-coding (NR_045290, exon 2 of 2) 7462 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA common_peak1_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-2 chr11 94601755 94601952 + 0.53895475198017 NA promoter-TSS (NM_153807) promoter-TSS (NM_153807) -67 NM_153807 264895 Mm.386885 NM_153807 ENSMUSG00000076435 Acsf2 - acyl-CoA synthetase family member 2 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-11 chr15 5541688 5541959 + 0.53895475198017 NA intron (NR_045274, intron 2 of 4) intron (NR_045274, intron 2 of 4) 45505 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-4 chr7 134263929 134264176 + 0.53895475198017 NA Intergenic Intergenic -38955 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-3 chr1 193301127 193301372 + 0.53895475198017 NA promoter-TSS (NM_001277928) promoter-TSS (NM_001277928) -745 NM_008484 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-16 chr18 80547570 80548028 + 0.53895475198017 NA Intergenic Intergenic -3253 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-34 chr6 51172369 51172642 + 0.53895475198017 NA Intergenic Intergenic 97405 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-40 chr8 82368918 82369399 + 0.53895475198017 NA intron (NM_008357, intron 2 of 7) intron (NM_008357, intron 2 of 7) 33428 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-20 chr18 35941761 35942048 + 0.53895475198017 NA Intergenic Intergenic -22926 NM_001289602 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-15 chr16 38092619 38092827 + 0.53895475198017 NA intron (NM_001347232, intron 1 of 11) intron (NM_001347232, intron 1 of 11) -3463 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-4 chr5 31582637 31582900 + 0.53895475198017 NA Intergenic Intergenic -11371 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_10_14_-0.71360523386497_3.55008797867603_0.53895475198017 chr10 77130868 77131099 + 0.53895475198017 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -17278 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-17 chr19 9104433 9104778 + 0.53895475198017 NA Intergenic Intergenic -16649 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017 chr1 171440595 171440878 + 0.53895475198017 NA intron (NM_172647, intron 1 of 9) intron (NM_172647, intron 1 of 9) 3175 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-27 chr3 154836406 154836676 + 0.53895475198017 NA intron (NM_177066, intron 21 of 24) intron (NM_177066, intron 21 of 24) 125408 NM_175176 209601 Mm.331454 NM_175176 ENSMUSG00000078161 Erich3 1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133 glutamate rich 3 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-7 chr5 136633256 136633541 + 0.53895475198017 NA Intergenic Intergenic -59748 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-9 chr4 136524820 136525084 + 0.53895475198017 NA intron (NM_024452, intron 2 of 4) intron (NM_024452, intron 2 of 4) 55191 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-13 chr9 58297248 58297537 + 0.53895475198017 NA intron (NM_010729, intron 2 of 6) intron (NM_010729, intron 2 of 6) 15820 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-39 chr8 76604278 76604501 + 0.53895475198017 NA Intergenic Intergenic 296232 NR_028579 102640923 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 - predicted gene 10649 ncRNA unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-9 chr11 74565106 74565414 + 0.53895475198017 NA intron (NM_001015046, intron 2 of 24) PB1D11|SINE|Alu 24898 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-27 chr8 12806874 12807168 + 0.53895475198017 NA intron (NM_015804, intron 2 of 28) intron (NM_015804, intron 2 of 28) 24898 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-8 chr11 59732375 59732691 + 0.53895475198017 NA intron (NR_045476, intron 3 of 5) intron (NR_045476, intron 3 of 5) 7621 NR_045476 69320 Mm.443242 NR_045476 ENSMUSG00000086330 1700007J10Rik 4930573L17Rik RIKEN cDNA 1700007J10 gene ncRNA unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-10 chr12 10536723 10536966 + 0.53895475198017 NA Intergenic Intergenic 90456 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-7 chr11 69097413 69097618 + 0.53895475198017 NA Intergenic Intergenic -1434 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-22 chr5 151190780 151191081 + 0.53895475198017 NA promoter-TSS (NM_001163493) promoter-TSS (NM_001163493) -737 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-23 chr7 70634019 70634305 + 0.53895475198017 NA Intergenic Intergenic -267416 NM_183261 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak2_16_9_0.494957742022334_3.56940696589853_0.53895475198017-5 chr6 30308929 30309137 + 0.53895475198017 NA Intergenic Intergenic -4494 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-18 chr17 31659032 31659277 + 0.53895475198017 NA promoter-TSS (NM_001357907) promoter-TSS (NM_001357907) -390 NM_001357907 108121 Mm.379289 NM_024187 ENSMUSG00000061613 U2af1 2010107D16Rik U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-45 chrX 74372961 74373217 + 0.53895475198017 NA intron (NR_103489, intron 1 of 5) intron (NR_103489, intron 1 of 5) 260 NM_001256104 214601 Mm.19931 NM_145406 ENSMUSG00000032806 Slc10a3 DXHXS253E|DXS253Eh|DXSmhG28|P3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-26 chr7 144993945 144994286 + 0.53895475198017 NA Intergenic Intergenic -54190 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-7 chr2 18927838 18928116 + 0.53895475198017 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 70144 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-36 chr7 111024909 111025177 + 0.53895475198017 NA Intergenic Intergenic -3908 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding unique_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-19 chr3 87619091 87619328 + 0.53895475198017 NA intron (NM_001360197, intron 1 of 38) intron (NM_001360197, intron 1 of 38) 1650 NM_001360195 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-4 chr16 90886469 90886897 + 0.53895475198017 NA intron (NM_027627, intron 4 of 6) ID_B1|SINE|B4 48166 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-5 chr10 79778523 79778794 + 0.53895475198017 NA exon (NM_031380, exon 2 of 5) exon (NM_031380, exon 2 of 5) 1384 NM_031380 83554 Mm.251710 NM_031380 ENSMUSG00000020325 Fstl3 E030038F23Rik|Flrg follistatin-like 3 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-13 chr15 55133969 55134360 + 0.53895475198017 NA intron (NM_001037937, intron 1 of 8) intron (NM_001037937, intron 1 of 8) 728 NM_001037937 97998 Mm.295397 NM_145470 ENSMUSG00000022419 Deptor Depdc6 DEP domain containing MTOR-interacting protein protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-25 chr2 125922502 125922892 + 0.53895475198017 NA intron (NM_175154, intron 5 of 9) intron (NM_175154, intron 5 of 9) 56474 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak1_16_9_0.494957742022334_3.56940696589853_0.53895475198017-21 chr18 40160841 40161148 + 0.53895475198017 NA Intergenic Intergenic 58405 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding common_peak2_10_14_-0.71360523386497_3.55008797867603_0.53895475198017-11 chr9 31204280 31204643 + 0.53895475198017 NA intron (NM_001357698, intron 1 of 17) intron (NM_001357698, intron 1 of 17) 7387 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding common_peak1_338_251_0.126823400814545_8.04069162390719_0.538901185114202 chr8 107292622 107294847 + 0.538901185114202 NA 5' UTR (NM_133957, exon 1 of 16) 5' UTR (NM_133957, exon 1 of 16) 264 NM_133957 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak2_169_157_-0.188402951233261_7.20957927256047_0.538864902325501 chr1 43224010 43226177 + 0.538864902325501 NA Intergenic Intergenic -28332 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_169_157_-0.188402951233261_7.20957927256047_0.538864902325501-2 chr12 73044310 73046278 + 0.538864902325501 NA intron (NM_009189, intron 1 of 1) CpG 1418 NM_009189 20471 Mm.4645 NM_009189 ENSMUSG00000051367 Six1 BB138287 sine oculis-related homeobox 1 protein-coding common_peak2_132_125_-0.213512398953884_6.87052372402298_0.538778248597146 chr4 54947574 54949881 + 0.538778248597146 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 782 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_152_109_0.183087368693458_6.87290339787139_0.538778248597146 chr16 38522096 38523540 + 0.538778248597146 NA promoter-TSS (NM_024273) promoter-TSS (NM_024273) -155 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding common_peak1_132_125_-0.213512398953884_6.87052372402298_0.538778248597146 chr15 100038578 100039679 + 0.538778248597146 NA intron (NM_001159361, intron 1 of 37) CpG 464 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding common_peak2_31_19_0.401056969757189_4.52245657976596_0.538442145997695-5 chr4 24496592 24497036 + 0.538442145997695 NA non-coding (NR_149739, exon 1 of 25) non-coding (NR_149739, exon 1 of 25) 363 NM_199467 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-8 chr4 46304939 46305253 + 0.538442145997695 NA Intergenic CpG -39098 NM_183298 110805 Mm.354634 NM_183298 ENSMUSG00000070990 Foxe1 Titf2 forkhead box E1 protein-coding unique_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-6 chr8 126767122 126767509 + 0.538442145997695 NA Intergenic Intergenic -81705 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-5 chrX 6400058 6400619 + 0.538442145997695 NA intron (NM_001040459, intron 1 of 8) CpG 306 NM_001040459 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-4 chr16 18289508 18289809 + 0.538442145997695 NA promoter-TSS (NM_033324) promoter-TSS (NM_033324) -490 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DGCR8, microprocessor complex subunit protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-6 chr18 9212329 9212661 + 0.538442145997695 NA promoter-TSS (NM_008058) promoter-TSS (NM_008058) -361 NM_008058 14370 Mm.184289 NM_008058 ENSMUSG00000036904 Fzd8 Fz8 frizzled class receptor 8 protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-9 chr8 79295166 79295443 + 0.538442145997695 NA promoter-TSS (NM_133823) promoter-TSS (NM_133823) 226 NR_045823 234479 Mm.238026 NR_045822 Gm4890 A630049P17 predicted gene 4890 ncRNA common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-9 chr6 114457751 114458216 + 0.538442145997695 NA promoter-TSS (NM_001317124) promoter-TSS (NM_001317124) -539 NM_001317124 15465 Mm.333327 NM_008285 ENSMUSG00000053004 Hrh1 Bphs|H1R|HH1R|Hir histamine receptor H1 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-10 chr4 149445574 149446022 + 0.538442145997695 NA Intergenic Intergenic 9170 NM_022020 63954 Mm.46023 NM_022020 ENSMUSG00000028996 Rbp7 1110002J23Rik|CRBP-III retinol binding protein 7, cellular protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-7 chr2 27842150 27842448 + 0.538442145997695 NA Intergenic Intergenic -44126 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-3 chr13 37895335 37895796 + 0.538442145997695 NA intron (NR_033218, intron 4 of 11) intron (NR_033218, intron 4 of 11) 6694 NM_001177869 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-2 chr10 91229601 91230018 + 0.538442145997695 NA Intergenic Intergenic -9190 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_31_19_0.401056969757189_4.52245657976596_0.538442145997695-6 chr6 140547748 140548094 + 0.538442145997695 NA intron (NM_144920, intron 11 of 30) intron (NM_144920, intron 11 of 30) -74742 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-10 chr2 24440573 24440950 + 0.538442145997695 NA exon (NM_011040, exon 7 of 12) exon (NM_011040, exon 7 of 12) 34838 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-4 chr15 73185081 73185387 + 0.538442145997695 NA promoter-TSS (NM_153178) promoter-TSS (NM_153178) -287 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding unique_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-4 chr19 5818962 5819768 + 0.538442145997695 NA Intergenic Intergenic -16693 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA unique_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-3 chr3 52641868 52642334 + 0.538442145997695 NA Intergenic Intergenic -97623 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-3 chr14 54863804 54864109 + 0.538442145997695 NA 5' UTR (NM_001177705, exon 1 of 2) 5' UTR (NM_001177705, exon 1 of 2) 202 NM_001177705 239099 Mm.280994 NM_183174 ENSMUSG00000057156 Homez mKIAA1443 homeodomain leucine zipper-encoding gene protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-9 chr2 13409440 13409737 + 0.538442145997695 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 82288 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-8 chr4 130360163 130360586 + 0.538442145997695 NA promoter-TSS (NM_153160) promoter-TSS (NM_153160) 242 NM_025645 66585 Mm.423019 NM_025645 ENSMUSG00000074088 Snrnp40 0610009C03Rik|Prp8bp|Wdr57 small nuclear ribonucleoprotein 40 (U5) protein-coding common_peak1_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-2 chr13 52765052 52765586 + 0.538442145997695 NA Intergenic Intergenic -8114 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-6 chr17 80772279 80772583 + 0.538442145997695 NA Intergenic Intergenic -44406 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-9 chr4 123905127 123905491 + 0.538442145997695 NA intron (NM_019660, intron 2 of 4) CpG-10277 296 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-7 chr8 26973607 26973987 + 0.538442145997695 NA Intergenic Intergenic -3539 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-8 chr19 53793686 53793961 + 0.538442145997695 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) -98408 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-11 chr2 120134654 120135029 + 0.538442145997695 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 19734 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-6 chr5 142909271 142909731 + 0.538442145997695 NA Intergenic Intergenic -2747 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-15 chr8 107206728 107206996 + 0.538442145997695 NA Intergenic Intergenic -49302 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak2_31_19_0.401056969757189_4.52245657976596_0.538442145997695-4 chr16 37786633 37786988 + 0.538442145997695 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 9755 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-11 chr5 151114357 151114889 + 0.538442145997695 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 75570 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-3 chr16 20499065 20499489 + 0.538442145997695 NA intron (NM_172265, intron 1 of 15) intron (NM_172265, intron 1 of 15) 460 NM_172265 224045 Mm.233855 NM_172265 ENSMUSG00000003235 Eif2b5 C81315 eukaryotic translation initiation factor 2B, subunit 5 epsilon protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-7 chr3 135668801 135669141 + 0.538442145997695 NA intron (NM_008689, intron 2 of 24) intron (NM_008689, intron 2 of 24) 22576 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-3 chr2 151960811 151961176 + 0.538442145997695 NA Intergenic Intergenic 6624 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak2_31_19_0.401056969757189_4.52245657976596_0.538442145997695-3 chr13 119462305 119462605 + 0.538442145997695 NA promoter-TSS (NM_001113550) promoter-TSS (NM_001113550) -304 NR_153825 67392 Mm.390641 NM_026127 ENSMUSG00000062822 4833420G17Rik 2210017J06Rik|5730533D17Rik|AW107518|C85193 RIKEN cDNA 4833420G17 gene protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695 chr11 72495628 72495983 + 0.538442145997695 NA Intergenic Intergenic -5885 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695 chr10 78244107 78244399 + 0.538442145997695 NA intron (NM_001081055, intron 1 of 22) CpG 389 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1|b2b2416Clo|b2b2613Clo trafficking protein particle complex 10 protein-coding unique_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695 chr11 77463813 77464373 + 0.538442145997695 NA exon (NM_139130, exon 1 of 10) exon (NM_139130, exon 1 of 10) 180 NM_139130 216961 Mm.33477 NM_139128 ENSMUSG00000020836 Coro6 - coronin 6 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-8 chr2 31950351 31950732 + 0.538442145997695 NA exon (NM_145144, exon 2 of 6) exon (NM_145144, exon 2 of 6) 238 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-2 chr1 78273268 78273769 + 0.538442145997695 NA Intergenic Intergenic -36828 NM_001004173 433323 Mm.276248 NM_001004173 ENSMUSG00000032908 Sgpp2 SPPase2|Spp2 sphingosine-1-phosphate phosphotase 2 protein-coding unique_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695 chr13 52673846 52674277 + 0.538442145997695 NA Intergenic Intergenic 77179 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-6 chr18 43393303 43393807 + 0.538442145997695 NA promoter-TSS (NM_009468) promoter-TSS (NM_009468) -178 NM_009468 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak1_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-4 chr5 37338609 37339003 + 0.538442145997695 NA intron (NM_145920, intron 1 of 19) intron (NM_145920, intron 1 of 19) 328 NM_145920 68525 Mm.25506 NM_145920 ENSMUSG00000050248 Evc2 1110017L09Rik|Lbn|limbin EvC ciliary complex subunit 2 protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-5 chr4 119106113 119106632 + 0.538442145997695 NA Intergenic Intergenic -2373 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-2 chr12 25110662 25110908 + 0.538442145997695 NA Intergenic Intergenic -14693 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-16 chr9 69473363 69473730 + 0.538442145997695 NA intron (NM_007585, intron 3 of 12) B3A|SINE|B2 16602 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695 chr1 60409797 60410303 + 0.538442145997695 NA intron (NM_198127, intron 1 of 8) CpG 431 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-13 chr5 104406681 104407012 + 0.538442145997695 NA Intergenic Intergenic -28265 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-4 chr16 45968475 45968884 + 0.538442145997695 NA non-coding (NR_152226, exon 3 of 3) non-coding (NR_152226, exon 3 of 3) 23073 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA unique_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-2 chr15 11783555 11784022 + 0.538442145997695 NA Intergenic Intergenic 121886 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-5 chr7 13277891 13278318 + 0.538442145997695 NA promoter-TSS (NM_010715) promoter-TSS (NM_010715) 617 NM_177312 321008 Mm.458832 NM_177312 ENSMUSG00000070814 Zswim9 6330408A02Rik zinc finger SWIM-type containing 9 protein-coding common_peak2_31_19_0.401056969757189_4.52245657976596_0.538442145997695 chr1 166811730 166812243 + 0.538442145997695 NA Intergenic Intergenic -130141 NM_001347135 240894 Mm.246610 NM_172844 ENSMUSG00000026560 Fmo9 4831428F09Rik flavin containing monooxygenase 9 protein-coding unique_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-4 chr7 49257864 49258481 + 0.538442145997695 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 11983 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-5 chr17 45695425 45695742 + 0.538442145997695 NA intron (NM_026732, intron 2 of 2) intron (NM_026732, intron 2 of 2) 9234 NM_026732 68463 Mm.379158 NM_026732 ENSMUSG00000023939 Mrpl14 1110006I11Rik|AI846816|MRP-L32|Rpml32 mitochondrial ribosomal protein L14 protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-4 chr3 96174887 96175586 + 0.538442145997695 NA intron (NM_153053, intron 4 of 5) intron (NM_153053, intron 4 of 5) 2730 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695 chr1 135728655 135729099 + 0.538442145997695 NA promoter-TSS (NR_153810) promoter-TSS (NR_153810) -290 NR_153810 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-5 chr19 17339256 17339609 + 0.538442145997695 NA promoter-TSS (NM_001136484) promoter-TSS (NM_001136484) 73 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-2 chr14 20892236 20892528 + 0.538442145997695 NA Intergenic Intergenic -37016 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_22_26_-0.504979220793969_4.50239789176648_0.538442145997695 chr12 111678204 111678563 + 0.538442145997695 NA 5' UTR (NM_177374, exon 1 of 3) 5' UTR (NM_177374, exon 1 of 3) 278 NM_177374 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding unique_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-2 chr11 94676814 94677203 + 0.538442145997695 NA intron (NM_145828, intron 1 of 10) CpG 485 NM_145828 217119 Mm.100638 NM_145828 ENSMUSG00000020868 Xylt2 E030002B02Rik|XT-II|XT2|xylT-II xylosyltransferase II protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-7 chr19 17339246 17339586 + 0.538442145997695 NA promoter-TSS (NM_001136484) promoter-TSS (NM_001136484) 89 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-14 chr5 114100580 114100823 + 0.538442145997695 NA intron (NM_001033202, intron 1 of 12) CpG 368 NM_001033202 100756 Mm.240421 NM_001033202 ENSMUSG00000029592 Usp30 6330590F17Rik|AI851327|D5Ertd483e ubiquitin specific peptidase 30 protein-coding unique_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695 chr1 38292475 38293087 + 0.538442145997695 NA intron (NM_001290814, intron 8 of 21) intron (NM_001290814, intron 8 of 21) 160698 NR_151587 329123 Mm.207123 NR_151587 ENSMUSG00000102716 Gm5099 EG329123 predicted gene 5099 ncRNA common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-5 chr17 27821036 27821397 + 0.538442145997695 NA promoter-TSS (NM_001271511) promoter-TSS (NM_001271511) -674 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_30_19_0.355576424238664_4.4997163070067_0.538442145997695-12 chr4 107177959 107178215 + 0.538442145997695 NA promoter-TSS (NM_029565) promoter-TSS (NM_029565) 279 NM_025617 66526 Mm.246956 NM_025617 ENSMUSG00000028619 Tceanc2 2210010B22Rik|2210012G02Rik|6330404A07Rik|AU015593|Tdeanc2 transcription elongation factor A (SII) N-terminal and central domain containing 2 protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-11 chr7 66378358 66378778 + 0.538442145997695 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 3156 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-10 chr6 136828476 136828740 + 0.538442145997695 NA promoter-TSS (NM_178776) promoter-TSS (NM_178776) -235 NM_178776 320135 Mm.386899 NM_178776 ENSMUSG00000047515 BC049715 - cDNA sequence BC049715 protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-6 chr2 119035006 119035462 + 0.538442145997695 NA exon (NM_173450, exon 1 of 3) exon (NM_173450, exon 1 of 3) 444 NM_173450 271842 Mm.33617 NM_173450 ENSMUSG00000027324 Rpusd2 4921503C21Rik|9630001E10|BB231107 RNA pseudouridylate synthase domain containing 2 protein-coding common_peak2_31_19_0.401056969757189_4.52245657976596_0.538442145997695-2 chr11 84828776 84829037 + 0.538442145997695 NA promoter-TSS (NR_046281) promoter-TSS (NR_046281) 97 NM_177564 192970 Mm.192213 NM_177564 ENSMUSG00000034449 Dhrs11 - dehydrogenase/reductase (SDR family) member 11 protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-4 chr15 37755050 37755463 + 0.538442145997695 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) -20625 NM_001359843 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-8 chr9 21546947 21547296 + 0.538442145997695 NA exon (NM_021531, exon 1 of 16) exon (NM_021531, exon 1 of 16) 227 NM_153141 59035 Mm.178115 NM_021531 ENSMUSG00000032185 Carm1 Prmt4 coactivator-associated arginine methyltransferase 1 protein-coding unique_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-3 chr11 108197060 108197633 + 0.538442145997695 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 146542 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-3 chr11 116615309 116615660 + 0.538442145997695 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 8768 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-12 chr8 126547528 126548131 + 0.538442145997695 NA Intergenic Intergenic 45607 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_22_26_-0.504979220793969_4.50239789176648_0.538442145997695-2 chr19 17876099 17876641 + 0.538442145997695 NA Intergenic Intergenic -38738 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding common_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-7 chr4 33248809 33249259 + 0.538442145997695 NA promoter-TSS (NM_001033225) promoter-TSS (NM_001033225) -247 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding unique_peak1_31_19_0.401056969757189_4.52245657976596_0.538442145997695-3 chr14 25517298 25517894 + 0.538442145997695 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -16843 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-2 chr11 69125296 69125549 + 0.538442145997695 NA promoter-TSS (NM_011786) promoter-TSS (NM_011786) -955 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695 chr1 91256363 91256979 + 0.538442145997695 NA intron (NM_001355764, intron 3 of 10) intron (NM_001355764, intron 3 of 10) 6105 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_30_19_0.355576424238664_4.4997163070067_0.538442145997695-5 chr16 58728115 58728436 + 0.538442145997695 NA intron (NR_045518, intron 1 of 3) CpG 365 NM_001252451 224250 Mm.29482 NM_171826 ENSMUSG00000022744 Cldnd1 1110019C08Rik|AA407103|AI849195|AW489850|Cldn25 claudin domain containing 1 protein-coding common_peak1_87_60_0.241383085460929_6.05142888029335_0.538245270207283-2 chr15 66843188 66843985 + 0.538245270207283 NA intron (NM_009375, intron 45 of 47) MIRc|SINE|MIR -11757 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_87_60_0.241383085460929_6.05142888029335_0.538245270207283-4 chr9 67104948 67105887 + 0.538245270207283 NA intron (NR_153957, intron 1 of 2) intron (NR_153957, intron 1 of 2) 3117 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak1_87_60_0.241383085460929_6.05142888029335_0.538245270207283-3 chr2 39004358 39005098 + 0.538245270207283 NA intron (NM_025592, intron 2 of 3) intron (NM_025592, intron 2 of 3) 403 NM_025592 66489 Mm.345333 NM_025592 ENSMUSG00000062997 Rpl35 2410039E09Rik ribosomal protein L35 protein-coding common_peak1_87_60_0.241383085460929_6.05142888029335_0.538245270207283 chr11 3963660 3964425 + 0.538245270207283 NA promoter-TSS (NM_022889) promoter-TSS (NM_022889) 67 NM_022889 64934 Mm.28659 NM_022889 ENSMUSG00000020430 Pes1 - pescadillo ribosomal biogenesis factor 1 protein-coding common_peak1_72_72_-0.285409123314091_6.04711999722297_0.53824527020727 chr4 141138906 141139757 + 0.53824527020727 NA intron (NM_001277195, intron 1 of 3) CpG 465 NR_102344 213491 Mm.332006 NM_174996 ENSMUSG00000040842 Szrd1 1110022I03|D4Ertd22e SUZ RNA binding domain containing 1 protein-coding common_peak2_72_72_-0.285409123314091_6.04711999722297_0.53824527020727 chr15 90432593 90433309 + 0.53824527020727 NA Intergenic Intergenic 79241 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA common_peak1_72_72_-0.285409123314091_6.04711999722297_0.53824527020727-2 chr7 4914854 4915975 + 0.53824527020727 NA intron (NM_170759, intron 1 of 2) CpG 197 NM_170759 232816 Mm.27442 NM_170759 ENSMUSG00000074406 Zfp628 Zec|Znf628 zinc finger protein 628 protein-coding common_peak2_73_50_0.251480419512703_5.79816555172785_0.538129021504633 chr8 46947396 46948211 + 0.538129021504633 NA Intergenic MIRb|SINE|MIR -39084 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_60_61_-0.307040241083999_5.80067618984488_0.538129021504633 chr6 88962464 88962988 + 0.538129021504633 NA Intergenic Intergenic 60475 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_60_61_-0.307040241083999_5.80067618984488_0.538129021504633 chr15 11539879 11540640 + 0.538129021504633 NA Intergenic Intergenic -140601 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_60_61_-0.307040241083999_5.80067618984488_0.538129021504633-2 chr4 89050982 89052120 + 0.538129021504633 NA intron (NR_033533, intron 1 of 2) intron (NR_033533, intron 1 of 2) 1244 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak2_60_61_-0.307040241083999_5.80067618984488_0.538129021504633-3 chr8 95012924 95013510 + 0.538129021504633 NA 3' UTR (NM_001198894, exon 14 of 14) 3' UTR (NM_001198894, exon 14 of 14) -4475 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak1_73_50_0.251480419512703_5.79816555172785_0.538129021504633 chr11 80209096 80209675 + 0.538129021504633 NA intron (NM_001163355, intron 1 of 19) CpG 330 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding common_peak1_73_50_0.251480419512703_5.79816555172785_0.538129021504633-2 chr14 117930865 117931371 + 0.538129021504633 NA intron (NM_001079844, intron 7 of 9) intron (NM_001079844, intron 7 of 9) 22729 NR_105747 102465148 NR_105747 ENSMUSG00000098648 Mir6239 Gm28025|mmu-mir-6239 microRNA 6239 ncRNA common_peak1_102_71_0.227662363615915_6.28375618325027_0.53806889543825 chr15 58075530 58076483 + 0.53806889543825 NA intron (NM_009572, intron 1 of 3) CpG 502 NM_001042438 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding common_peak1_86_84_-0.253642312532981_6.28256977987121_0.53806889543825 chr1 91398051 91398734 + 0.53806889543825 NA intron (NM_023343, intron 1 of 11) CpG 431 NM_023343 67444 Mm.337240 NM_023343 ENSMUSG00000026309 Ilkap 0710007A14Rik|1600009O09Rik|PP2C-DELTA integrin-linked kinase-associated serine/threonine phosphatase 2C protein-coding common_peak1_172_124_0.174652755204768_7.05311066226447_0.538006097890649 chr16 95701737 95703623 + 0.538006097890649 NA intron (NM_011809, intron 1 of 9) CpG 273 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak1_118_83_0.212117504558577_6.49837617505805_0.537718187625393-2 chr19 16252619 16254500 + 0.537718187625393 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 61445 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_118_83_0.212117504558577_6.49837617505805_0.537718187625393 chr1 170174031 170174845 + 0.537718187625393 NA intron (NM_133806, intron 1 of 10) intron (NM_133806, intron 1 of 10) 526 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_118_83_0.212117504558577_6.49837617505805_0.537718187625393 chr12 8921653 8923005 + 0.537718187625393 NA intron (NM_008640, intron 1 of 6) CpG 1022 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak2_118_83_0.212117504558577_6.49837617505805_0.537718187625393-2 chr2 155825800 155826686 + 0.537718187625393 NA intron (NM_010579, intron 1 of 5) CpG-8733 682 NM_010579 16418 Mm.271674 NM_010579 ENSMUSG00000027613 Eif6 1110004P11|AA408895|CAB|Itgb4bp|eIF-6|imc-415|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding common_peak2_100_97_-0.245211944857795_6.49210387168631_0.537718187625369 chr2 70661482 70662315 + 0.537718187625369 NA intron (NM_027352, intron 1 of 9) CpG 389 NM_027352 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding common_peak1_61_41_0.278132116774021_5.53138348116577_0.537526587463064 chr1 175624757 175625567 + 0.537526587463064 NA intron (NM_010209, intron 1 of 9) intron (NM_010209, intron 1 of 9) 473 NM_010209 14194 Mm.41502 NM_010209 ENSMUSG00000026526 Fh1 Fh|Fh-1 fumarate hydratase 1 protein-coding common_peak1_49_51_-0.338140855988783_5.5313692901467_0.537526587463064-3 chr8 126883571 126884185 + 0.537526587463064 NA Intergenic Intergenic 34858 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_49_51_-0.338140855988783_5.5313692901467_0.537526587463064 chr15 12824152 12824639 + 0.537526587463064 NA promoter-TSS (NM_001130149) promoter-TSS (NM_001130149) 262 NM_029998 77877 Mm.207311 NM_029998 ENSMUSG00000022195 6030458C11Rik - RIKEN cDNA 6030458C11 gene protein-coding common_peak2_61_41_0.278132116774021_5.53138348116577_0.537526587463064 chr13 70836722 70837485 + 0.537526587463064 NA intron (NM_172053, intron 2 of 22) intron (NM_172053, intron 2 of 22) 4708 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak1_61_41_0.278132116774021_5.53138348116577_0.537526587463064-3 chr5 67261067 67261767 + 0.537526587463064 NA intron (NM_001285452, intron 1 of 6) intron (NM_001285452, intron 1 of 6) 852 NM_030108 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding common_peak2_61_41_0.278132116774021_5.53138348116577_0.537526587463064-2 chr7 100371028 100371862 + 0.537526587463064 NA promoter-TSS (NM_001017985) promoter-TSS (NM_001017985) 451 NM_028292 72590 Mm.177502 NM_028292 ENSMUSG00000030718 Ppme1 1110069N17Rik|2700017M01Rik|PME-1|Pme1 protein phosphatase methylesterase 1 protein-coding common_peak2_49_51_-0.338140855988783_5.5313692901467_0.537526587463064-4 chr5 138161137 138161723 + 0.537526587463064 NA exon (NM_012002, exon 2 of 10) exon (NM_012002, exon 2 of 10) 328 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding common_peak2_49_51_-0.338140855988783_5.5313692901467_0.537526587463064-2 chr15 76538081 76538652 + 0.537526587463064 NA promoter-TSS (NM_029643) promoter-TSS (NM_029643) 380 NM_013909 30840 Mm.275279 NM_013909 ENSMUSG00000022559 Fbxl6 AU021795|Fbl6 F-box and leucine-rich repeat protein 6 protein-coding common_peak2_49_51_-0.338140855988783_5.5313692901467_0.537526587463064 chr15 64312954 64313535 + 0.537526587463064 NA promoter-TSS (NM_001276462) promoter-TSS (NM_001276462) -571 NM_001276463 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_61_41_0.278132116774021_5.53138348116577_0.537526587463064-2 chr11 12463799 12464751 + 0.537526587463064 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 685 NM_172496 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_49_51_-0.338140855988783_5.5313692901467_0.537526587463064-3 chr5 100636625 100637242 + 0.537526587463064 NA Intergenic Intergenic 37323 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak1_49_51_-0.338140855988783_5.5313692901467_0.537526587463064-2 chr6 5139082 5139707 + 0.537526587463064 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 54552 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding common_peak1_116_111_-0.227200522720826_6.69375466069719_0.537266605643687 chr16 44138326 44139688 + 0.537266605643687 NA promoter-TSS (NM_028108) promoter-TSS (NM_028108) 252 NM_001358203 11964 Mm.217787 NM_007508 ENSMUSG00000052459 Atp6v1a AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2 ATPase, H+ transporting, lysosomal V1 subunit A protein-coding common_peak2_237_174_0.146168835931764_7.52429552979821_0.537175935790835 chr16 25058727 25060771 + 0.537175935790835 NA non-coding (NR_040374, exon 1 of 3) non-coding (NR_040374, exon 1 of 3) 110 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_153_110_0.179363606247839_6.88409766947403_0.536760323636035 chr1 91022686 91024095 + 0.536760323636035 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 24663 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_153_110_0.179363606247839_6.88409766947403_0.536760323636035 chr2 69722430 69723974 + 0.536760323636035 NA 5' UTR (NM_001081086, exon 1 of 14) 5' UTR (NM_001081086, exon 1 of 14) 114 NM_001081086 228005 Mm.11815 NM_001081086 ENSMUSG00000042133 Ppig AU019516|AU022200|B230312B02Rik|CYP|SRCyp peptidyl-prolyl isomerase G (cyclophilin G) protein-coding common_peak1_531_400_0.102199138944624_8.69855799592723_0.536542155034167 chr15 85565834 85571373 + 0.536542155034167 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 9467 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_262_193_0.140551700355524_7.67018869236489_0.536421811467087 chr3 89418584 89420319 + 0.536421811467087 NA intron (NM_011368, intron 1 of 12) intron (NM_011368, intron 1 of 12) 900 NM_011368 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding common_peak2_152_142_-0.195424254560272_7.06215920949825_0.536228582006485 chr18 80534660 80535786 + 0.536228582006485 NA Intergenic Intergenic 9323 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_39_42_-0.383622791303668_5.23445335905026_0.53611512876719-2 chr18 61044011 61044608 + 0.53611512876719 NA promoter-TSS (NM_001146268) promoter-TSS (NM_001146268) -841 NM_001146268 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding unique_peak1_50_33_0.303203618313567_5.23906465040712_0.53611512876719-2 chr15 78987622 78988162 + 0.53611512876719 NA exon (NM_138579, exon 12 of 24) exon (NM_138579, exon 12 of 24) 4836 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding unique_peak1_50_33_0.303203618313567_5.23906465040712_0.53611512876719 chr11 101806638 101807388 + 0.53611512876719 NA Intergenic Intergenic -21703 NM_001316365 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding common_peak2_50_33_0.303203618313567_5.23906465040712_0.53611512876719-5 chr9 44880488 44881033 + 0.53611512876719 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 514 NM_001357549 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding unique_peak2_39_42_-0.383622791303668_5.23445335905026_0.53611512876719 chr6 50387306 50388160 + 0.53611512876719 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -4896 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_50_33_0.303203618313567_5.23906465040712_0.53611512876719-3 chr7 125552335 125552855 + 0.53611512876719 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 313 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak2_50_33_0.303203618313567_5.23906465040712_0.53611512876719-4 chr3 90231690 90232112 + 0.53611512876719 NA 5' UTR (NM_206924, exon 1 of 5) 5' UTR (NM_206924, exon 1 of 5) 304 NM_206924 23922 Mm.13912 NM_206924 ENSMUSG00000027937 Jtb Gm622 jumping translocation breakpoint protein-coding common_peak1_50_33_0.303203618313567_5.23906465040712_0.53611512876719 chr15 53174646 53175195 + 0.53611512876719 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 171263 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_39_42_-0.383622791303668_5.23445335905026_0.53611512876719 chr13 29855047 29855676 + 0.53611512876719 NA intron (NM_001308486, intron 1 of 5) CpG 312 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_50_33_0.303203618313567_5.23906465040712_0.53611512876719-3 chr2 141587790 141588370 + 0.53611512876719 NA intron (NM_001013802, intron 6 of 18) intron (NM_001013802, intron 6 of 18) -916604 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding common_peak1_39_42_-0.383622791303668_5.23445335905026_0.53611512876719-3 chr19 53407380 53407745 + 0.53611512876719 NA Intergenic Intergenic -16928 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_39_42_-0.383622791303668_5.23445335905026_0.53611512876719-2 chr2 153291264 153292011 + 0.53611512876719 NA intron (NM_008444, intron 1 of 8) CpG 221 NM_008444 16569 Mm.315560 NM_008444 ENSMUSG00000027475 Kif3b AI854312|AW549267|mKIAA0359 kinesin family member 3B protein-coding common_peak2_50_33_0.303203618313567_5.23906465040712_0.53611512876719-2 chr2 19684926 19685639 + 0.53611512876719 NA Intergenic Intergenic 27220 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding common_peak2_39_42_-0.383622791303668_5.23445335905026_0.53611512876719-3 chr5 110107709 110108178 + 0.53611512876719 NA exon (NM_145147, exon 1 of 10) exon (NM_145147, exon 1 of 10) 254 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding common_peak2_50_33_0.303203618313567_5.23906465040712_0.53611512876719 chr13 110912114 110912644 + 0.53611512876719 NA Intergenic Intergenic -8533 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_39_42_-0.383622791303668_5.23445335905026_0.53611512876719-4 chr9 96863323 96863798 + 0.53611512876719 NA intron (NM_001289645, intron 1 of 6) intron (NM_001289645, intron 1 of 6) 25914 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak1_50_33_0.303203618313567_5.23906465040712_0.53611512876719-2 chr16 22161335 22162143 + 0.53611512876719 NA intron (NM_183029, intron 1 of 15) CpG 1560 NM_183029 319765 Mm.489442 NM_183029 ENSMUSG00000033581 Igf2bp2 C330012H03Rik|IMP-2|Imp2|Neilsen insulin-like growth factor 2 mRNA binding protein 2 protein-coding common_peak1_39_42_-0.383622791303668_5.23445335905026_0.53611512876719 chr18 5334544 5334776 + 0.53611512876719 NA promoter-TSS (NM_178722) promoter-TSS (NM_178722) 147 NM_001360447 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding common_peak1_239_175_0.149935987842099_7.53439961255835_0.535898222341529 chr2 20966859 20969431 + 0.535898222341529 NA promoter-TSS (NR_033225) promoter-TSS (NR_033225) -424 NM_001128084 71435 Mm.28507 NM_001081364 ENSMUSG00000036591 Arhgap21 5530401C11Rik|AA416458|ARHGAP10 Rho GTPase activating protein 21 protein-coding common_peak2_194_141_0.162173596785276_7.23083391789732_0.535689930320005 chr19 53037489 53038599 + 0.535689930320005 NA intron (NM_133216, intron 1 of 20) intron (NM_133216, intron 1 of 20) 610 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding common_peak1_432_324_0.11039818344387_8.39949499963775_0.53561159435593 chr19 38025571 38027666 + 0.53561159435593 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 16959 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_263_194_0.138570731928417_7.67661567971382_0.53526973554843 chr15 39005703 39007671 + 0.53526973554843 NA intron (NM_008056, intron 1 of 6) CpG 354 NM_008056 14368 Mm.4769 NM_008056 ENSMUSG00000022297 Fzd6 Fz6 frizzled class receptor 6 protein-coding common_peak1_237_215_-0.157507554399375_7.67613372496378_0.53526973554843 chr15 61985633 61987119 + 0.53526973554843 NA intron (NM_001177353, intron 1 of 2) CpG 1035 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_193_177_-0.171177856128564_7.39014450290212_0.535156070593048 chr10 80151464 80153705 + 0.535156070593048 NA intron (NM_001347117, intron 4 of 7) intron (NM_001347117, intron 4 of 7) 2902 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_102_98_-0.231769255021383_6.51347199256892_0.535112040287526 chr6 72956991 72958297 + 0.535112040287526 NA exon (NM_001039392, exon 2 of 2) exon (NM_001039392, exon 2 of 2) 588 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak2_119_84_0.207031649914939_6.51290676109517_0.535112040287526-2 chr4 4792211 4793311 + 0.535112040287526 NA exon (NM_177730, exon 1 of 5) exon (NM_177730, exon 1 of 5) 545 NM_177730 242291 Mm.218889 NM_177730 ENSMUSG00000066324 Impad1 1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP inositol monophosphatase domain containing 1 protein-coding common_peak2_119_84_0.207031649914939_6.51290676109517_0.535112040287526 chr12 79171966 79172711 + 0.535112040287526 NA 5' UTR (NM_016800, exon 1 of 6) 5' UTR (NM_016800, exon 1 of 6) 120 NM_016800 53612 Mm.265929 NM_016800 ENSMUSG00000021124 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding common_peak1_103_72_0.221603656428607_6.30062638709432_0.535042315425563 chr13 14613300 14613936 + 0.535042315425563 NA promoter-TSS (NM_029271) promoter-TSS (NM_029271) 376 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding common_peak1_103_72_0.221603656428607_6.30062638709432_0.535042315425563-2 chr7 133775884 133777128 + 0.535042315425563 NA promoter-TSS (NM_025850) promoter-TSS (NM_025850) 297 NM_001286032 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_136_97_0.191505730000571_6.71046270911549_0.535002055111823 chr10 122046498 122047809 + 0.535002055111823 NA exon (NM_001242411, exon 1 of 22) exon (NM_001242411, exon 1 of 22) 162 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding common_peak1_136_97_0.191505730000571_6.71046270911549_0.535002055111823-2 chr11 52360633 52361790 + 0.535002055111823 NA intron (NM_011694, intron 1 of 8) CpG 349 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak2_135_127_-0.204279101810037_6.89786044909498_0.534776390967081-2 chr4 136310284 136311814 + 0.534776390967081 NA promoter-TSS (NM_001355182) promoter-TSS (NM_001355182) 107 NM_001277123 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding common_peak2_135_127_-0.204279101810037_6.89786044909498_0.534776390967081 chr19 5928706 5930272 + 0.534776390967081 NA Intergenic Intergenic -4673 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak1_135_127_-0.204279101810037_6.89786044909498_0.534776390967081 chr15 53616124 53617656 + 0.534776390967081 NA intron (NM_177225, intron 4 of 4) intron (NM_177225, intron 4 of 4) -2611 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_88_61_0.234110916013052_6.0712517683934_0.534695158203314 chr2 167763989 167765308 + 0.534695158203314 NA Intergenic Intergenic 73471 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_73_73_-0.285547604144752_6.06667956355657_0.534695158203301 chr13 8995715 8996623 + 0.534695158203301 NA promoter-TSS (NM_027000) promoter-TSS (NM_027000) -157 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding common_peak2_73_73_-0.285547604144752_6.06667956355657_0.534695158203301-2 chr14 33359197 33360129 + 0.534695158203301 NA intron (NM_153800, intron 6 of 10) intron (NM_153800, intron 6 of 10) 51361 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_153_143_-0.196145528844367_7.07185223702013_0.534477550943962 chr18 3336131 3337702 + 0.534477550943962 NA non-coding (NR_033457, exon 1 of 2) non-coding (NR_033457, exon 1 of 2) 500 NR_033457 633947 Mm.461446 NR_033457 ENSMUSG00000097746 Gm6225 EG621440 predicted gene 6225 ncRNA common_peak2_239_216_-0.152183625965083_7.68545941946194_0.534128886788004 chr3 105051456 105053881 + 0.534128886788004 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 285 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding unique_peak1_75_51_0.261668756830811_5.8312740965565_0.533919121953929 chr6 88970899 88971843 + 0.533919121953929 NA Intergenic Intergenic 69120 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_74_51_0.242694746238671_5.82178709126043_0.533919121953929-3 chr6 94283176 94283823 + 0.533919121953929 NA 5' UTR (NM_001286784, exon 1 of 23) 5' UTR (NM_001286784, exon 1 of 23) 418 NM_010367 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak1_75_51_0.261668756830811_5.8312740965565_0.533919121953929 chr9 65020879 65021598 + 0.533919121953929 NA intron (NM_021345, intron 1 of 10) CpG 479 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak2_61_62_-0.306830383947135_5.82386473152635_0.533919121953929-2 chr3 152142922 152143961 + 0.533919121953929 NA intron (NM_016867, intron 1 of 5) intron (NM_016867, intron 1 of 5) 22459 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak2_61_62_-0.306830383947135_5.82386473152635_0.533919121953929-4 chr7 34654754 34655922 + 0.533919121953929 NA promoter-TSS (NM_001360820) promoter-TSS (NM_001360820) 171 NM_001360818 233107 Mm.76761 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak2_75_51_0.261668756830811_5.8312740965565_0.533919121953929 chr19 9107088 9107734 + 0.533919121953929 NA Intergenic Intergenic -19455 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_74_51_0.242694746238671_5.82178709126043_0.533919121953929-2 chr6 88936319 88937450 + 0.533919121953929 NA Intergenic Intergenic 34633 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_61_62_-0.306830383947135_5.82386473152635_0.533919121953929-3 chr5 67260797 67261422 + 0.533919121953929 NA intron (NM_001285452, intron 1 of 6) CpG 544 NM_030108 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding common_peak2_74_51_0.242694746238671_5.82178709126043_0.533919121953929 chr13 109242752 109243409 + 0.533919121953929 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -81664 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA common_peak1_61_62_-0.306830383947135_5.82386473152635_0.533919121953929-2 chr8 111056457 111057083 + 0.533919121953929 NA exon (NM_028274, exon 1 of 1) exon (NM_028274, exon 1 of 1) 431 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding unique_peak2_61_62_-0.306830383947135_5.82386473152635_0.533919121953929 chr13 98262335 98262931 + 0.533919121953929 NA promoter-TSS (NM_001271390) promoter-TSS (NM_001271390) 359 NM_178918 105372 Mm.28221 NM_178918 ENSMUSG00000041747 Utp15 AW544865 UTP15 small subunit processome component protein-coding common_peak1_74_51_0.242694746238671_5.82178709126043_0.533919121953929 chr2 137756044 137757018 + 0.533919121953929 NA Intergenic Intergenic -500053 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_74_51_0.242694746238671_5.82178709126043_0.533919121953929-2 chr4 107453364 107454032 + 0.533919121953929 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 18979 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_61_62_-0.306830383947135_5.82386473152635_0.533919121953929 chr11 72207082 72208168 + 0.533919121953929 NA promoter-TSS (NM_026559) promoter-TSS (NM_026559) 71 NM_026559 52700 Mm.27670 NM_026559 ENSMUSG00000020803 Txndc17 4831443O22Rik|D11Ertd672e|TRP14|Txnl5 thioredoxin domain containing 17 protein-coding common_peak1_61_62_-0.306830383947135_5.82386473152635_0.533919121953929 chr5 136465255 136466060 + 0.533919121953929 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -89854 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA common_peak2_40_26_0.323127045010214_4.91645102466858_0.533344939162183 chr1 164451051 164451505 + 0.533344939162183 NA intron (NM_009721, intron 2 of 5) intron (NM_009721, intron 2 of 5) 7077 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak2_40_26_0.323127045010214_4.91645102466858_0.533344939162183-2 chr2 37702539 37703112 + 0.533344939162183 NA Intergenic CpG -14541 NR_039590 100628597 NR_039590 ENSMUSG00000092958 Mir5128 mir-5128|mmu-mir-5128|mu-mir-5128 microRNA 5128 ncRNA unique_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-2 chr13 73467329 73468195 + 0.533344939162183 NA intron (NM_145376, intron 1 of 13) intron (NM_145376, intron 1 of 13) 379 NM_145376 210992 Mm.284649 NM_145376 ENSMUSG00000021608 Lpcat1 2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11 lysophosphatidylcholine acyltransferase 1 protein-coding common_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-3 chr15 12203763 12204262 + 0.533344939162183 NA Intergenic Intergenic -1016 NM_001356498 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak2_40_26_0.323127045010214_4.91645102466858_0.533344939162183-3 chr3 116594385 116594773 + 0.533344939162183 NA promoter-TSS (NM_001289571) promoter-TSS (NM_001289571) 308 NR_152258 229780 Mm.259648 NM_030016 ENSMUSG00000033439 Trmt13 4631408H19Rik|A330067P21|A930028L21Rik|Ccdc76 tRNA methyltransferase 13 protein-coding unique_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-3 chr13 73603507 73603864 + 0.533344939162183 NA promoter-TSS (NM_146047) promoter-TSS (NM_146047) -317 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding common_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183 chr1 33755844 33756318 + 0.533344939162183 NA intron (NM_145392, intron 1 of 2) intron (NM_145392, intron 1 of 2) 1669 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding common_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-5 chr7 44818694 44819342 + 0.533344939162183 NA intron (NM_001171024, intron 1 of 8) intron (NM_001171024, intron 1 of 8) -2360 NR_033136 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding unique_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183 chr10 68092092 68092760 + 0.533344939162183 NA Intergenic Intergenic 112856 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-4 chr6 140620261 140620766 + 0.533344939162183 NA Intergenic Intergenic -2150 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-2 chr13 48261176 48262103 + 0.533344939162183 NA exon (NM_031166, exon 1 of 3) exon (NM_031166, exon 1 of 3) 212 NM_031166 15904 Mm.458006 NM_031166 ENSMUSG00000021379 Id4 Idb4|bHLHb27 inhibitor of DNA binding 4 protein-coding common_peak1_40_26_0.323127045010214_4.91645102466858_0.533344939162183-6 chr7 65693530 65694414 + 0.533344939162183 NA intron (NM_178056, intron 2 of 5) intron (NM_178056, intron 2 of 5) 555 NM_026795 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-8 chr18 36726459 36726793 + 0.533344939162177 NA 5' UTR (NM_009841, exon 1 of 2) 5' UTR (NM_009841, exon 1 of 2) 189 NM_009841 12475 Mm.3460 NM_009841 ENSMUSG00000051439 Cd14 - CD14 antigen protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-10 chr6 100707080 100707476 + 0.533344939162177 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 2544 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-2 chr11 115813140 115813608 + 0.533344939162177 NA intron (NM_080643, intron 1 of 19) CpG 218 NM_080643 140721 Mm.383737 NM_080643 ENSMUSG00000034471 Caskin2 1600028L06Rik|mKIAA1139 CASK-interacting protein 2 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-7 chr17 86536233 86536785 + 0.533344939162177 NA intron (NM_011104, intron 10 of 14) intron (NM_011104, intron 10 of 14) -217355 NM_010137 13819 Mm.1415 NM_010137 ENSMUSG00000024140 Epas1 HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73 endothelial PAS domain protein 1 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-11 chr2 101985297 101986013 + 0.533344939162177 NA intron (NM_178886, intron 4 of 5) HAL1|LINE|L1 99393 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding common_peak1_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-3 chr5 5749033 5749309 + 0.533344939162177 NA intron (NM_027399, intron 1 of 4) CpG 146 NM_027399 70358 Mm.85429 NM_027399 ENSMUSG00000015652 Steap1 2410007B19Rik|Prss24|Steap six transmembrane epithelial antigen of the prostate 1 protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-5 chr15 98672889 98673369 + 0.533344939162177 NA intron (NM_172612, intron 3 of 4) intron (NM_172612, intron 3 of 4) 4332 NM_172612 223881 Mm.274010 NM_172612 ENSMUSG00000054855 Rnd1 A830014L09Rik|Arhs Rho family GTPase 1 protein-coding common_peak1_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-6 chr7 95753370 95753814 + 0.533344939162177 NA Intergenic Intergenic -417652 NM_001310762 23966 Mm.254610 NM_011858 ENSMUSG00000048078 Tenm4 Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302 teneurin transmembrane protein 4 protein-coding unique_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177 chr1 40541990 40542440 + 0.533344939162177 NA intron (NM_010553, intron 10 of 12) intron (NM_010553, intron 10 of 12) 26853 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_31_34_-0.406297952300415_4.92613404079476_0.533344939162177 chr11 72469929 72470369 + 0.533344939162177 NA intron (NM_153060, intron 2 of 12) intron (NM_153060, intron 2 of 12) 4878 NM_001276383 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-10 chr2 9480934 9481723 + 0.533344939162177 NA Intergenic Intergenic 291813 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-2 chr1 178528876 178529705 + 0.533344939162177 NA 5' UTR (NM_001161665, exon 1 of 15) 5' UTR (NM_001161665, exon 1 of 15) 165 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-9 chr19 24719884 24720389 + 0.533344939162177 NA intron (NM_175013, intron 9 of 10) intron (NM_175013, intron 9 of 10) 46128 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-4 chr13 51965884 51966641 + 0.533344939162177 NA Intergenic Intergenic 119587 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-4 chr6 52160640 52161089 + 0.533344939162177 NA intron (NR_131181, intron 1 of 1) intron (NR_131181, intron 1 of 1) 2340 NR_131181 105242658 Mm.372521 NR_131181 ENSMUSG00000087658 Hotairm1 Gm15051|Hoxaas1 Hoxa transcript antisense RNA, myeloid-specific 1 ncRNA common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177 chr1 82595470 82596248 + 0.533344939162177 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 8938 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-12 chr3 53109655 53109967 + 0.533344939162177 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 68264 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-7 chr3 37917792 37918504 + 0.533344939162177 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 19335 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-4 chr11 17158711 17159086 + 0.533344939162177 NA promoter-TSS (NM_024459) promoter-TSS (NM_024459) -400 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-3 chr11 120549290 120549653 + 0.533344939162177 NA TTS (NM_026814) TTS (NM_026814) 256 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Mcrip1 Fam195b MAPK regulated corepressor interacting protein 1 protein-coding common_peak1_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-2 chr13 112445773 112446286 + 0.533344939162177 NA Intergenic ID4|SINE|ID -18041 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-3 chr10 24388657 24389300 + 0.533344939162177 NA Intergenic Intergenic 165461 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-5 chr7 25249000 25249375 + 0.533344939162177 NA intron (NM_010155, intron 1 of 3) CpG 1571 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-12 chr9 102734888 102735459 + 0.533344939162177 NA Intergenic Intergenic -4475 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-6 chr15 56841913 56842251 + 0.533344939162177 NA Intergenic Intergenic -147536 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-6 chr2 32395612 32395841 + 0.533344939162177 NA promoter-TSS (NM_133783) promoter-TSS (NM_133783) -164 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding unique_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-2 chr4 121020565 121021223 + 0.533344939162177 NA Intergenic Intergenic -3647 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-14 chr7 12478355 12478832 + 0.533344939162177 NA 5' UTR (NM_001039951, exon 1 of 4) 5' UTR (NM_001039951, exon 1 of 4) 288 NM_026112 67370 Mm.98929 NM_026112 ENSMUSG00000030386 Zfp606 2410022M24Rik|AW494727 zinc finger protein 606 protein-coding common_peak1_30_34_-0.45177849781894_4.9033937680355_0.533344939162177 chr13 34077291 34077782 + 0.533344939162177 NA intron (NM_009450, intron 1 of 3) intron (NM_009450, intron 1 of 3) 472 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177 chr1 184708958 184709419 + 0.533344939162177 NA Intergenic Intergenic -3309 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA unique_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-3 chr4 130359398 130359892 + 0.533344939162177 NA promoter-TSS (NM_025645) promoter-TSS (NM_025645) 347 NR_149716 619605 Mm.297196 NM_153160 ENSMUSG00000028772 Zcchc17 2810055E05Rik|HSPC251|LDC4|pNO40|pS1D zinc finger, CCHC domain containing 17 protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-13 chr4 123283025 123283559 + 0.533344939162177 NA 5' UTR (NM_001356377, exon 1 of 14) 5' UTR (NM_001356377, exon 1 of 14) 381 NM_130881 230721 Mm.277091 NM_130881 ENSMUSG00000011257 Pabpc4 - poly(A) binding protein, cytoplasmic 4 protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-11 chr7 4996285 4996851 + 0.533344939162177 NA promoter-TSS (NM_026741) promoter-TSS (NM_026741) -467 NM_026741 68490 Mm.76400 NM_026741 ENSMUSG00000051550 Zfp579 1110003A17Rik|Znf579 zinc finger protein 579 protein-coding common_peak1_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-2 chr4 129018844 129019228 + 0.533344939162177 NA Intergenic Intergenic 25812 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-8 chr3 41319403 41319834 + 0.533344939162177 NA Intergenic Intergenic 173581 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_31_34_-0.406297952300415_4.92613404079476_0.533344939162177-9 chr5 30232792 30233271 + 0.533344939162177 NA intron (NM_027652, intron 1 of 9) intron (NM_027652, intron 1 of 9) 450 NR_137634 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak2_30_34_-0.45177849781894_4.9033937680355_0.533344939162177-5 chr13 45749279 45749929 + 0.533344939162177 NA intron (NM_001199304, intron 4 of 6) intron (NM_001199304, intron 4 of 6) 215387 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_136_128_-0.205011681307474_6.90872141476952_0.532825598221426 chr5 145231203 145232484 + 0.532825598221426 NA promoter-TSS (NM_028298) promoter-TSS (NM_028298) 84 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding common_peak2_136_128_-0.205011681307474_6.90872141476952_0.532825598221426-2 chr8 11361868 11364032 + 0.532825598221426 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -50124 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_119_113_-0.2164674281121_6.72465630010869_0.532780544441769 chr6 86849070 86850764 + 0.532780544441769 NA promoter-TSS (NR_028298) promoter-TSS (NR_028298) 400 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak1_137_98_0.187277304370856_6.72299527226504_0.532780544441769 chr8 106935534 106936797 + 0.532780544441769 NA exon (NM_009229, exon 1 of 7) exon (NM_009229, exon 1 of 7) 415 NM_009229 20650 Mm.30228 NM_009229 ENSMUSG00000041308 Sntb2 Snt2 syntrophin, basic 2 protein-coding common_peak1_155_144_-0.187645272478854_7.08608645377551_0.532752416761417 chr12 73044497 73046113 + 0.532752416761417 NA intron (NM_009189, intron 1 of 1) CpG 1407 NM_009189 20471 Mm.4645 NM_009189 ENSMUSG00000051367 Six1 BB138287 sine oculis-related homeobox 1 protein-coding common_peak1_176_127_0.173181707976889_7.08659085398844_0.532752416761417 chr11 59809376 59810461 + 0.532752416761417 NA promoter-TSS (NR_045686) promoter-TSS (NR_045686) 121 NM_001271356 216805 Mm.339640 NM_146018 ENSMUSG00000032633 Flcn AU014660|B430214A04Rik|Bhd|FLCL folliculin protein-coding common_peak1_175_127_0.165065443450573_7.08253272172529_0.532752416761417 chr19 10203651 10204719 + 0.532752416761417 NA promoter-TSS (NM_026919) promoter-TSS (NM_026919) -16 NM_007999 14156 Mm.2952 NM_007999 ENSMUSG00000024742 Fen1 AW538437|FEN-1 flap structure specific endonuclease 1 protein-coding common_peak1_154_144_-0.196857631281518_7.08148027437418_0.532752416761417 chr1 135844856 135846811 + 0.532752416761417 NA intron (NM_001130175, intron 4 of 13) intron (NM_001130175, intron 4 of 13) 4972 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak2_155_144_-0.187645272478854_7.08608645377551_0.532752416761417 chr14 31250922 31252110 + 0.532752416761417 NA promoter-TSS (NM_001360624) promoter-TSS (NM_001360624) 27 NM_027088 104416 Mm.3779 NM_027088 ENSMUSG00000021901 Bap1 2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4 Brca1 associated protein 1 protein-coding common_peak1_174_161_-0.18294707073143_7.24837646751891_0.532598659084714 chr11 60776306 60778410 + 0.532598659084714 NA promoter-TSS (NM_175491) promoter-TSS (NM_175491) 7 NM_009410 21975 Mm.10708 NM_009410 ENSMUSG00000002814 Top3a - topoisomerase (DNA) III alpha protein-coding common_peak2_174_161_-0.18294707073143_7.24837646751891_0.532598659084714 chr10 128035111 128036475 + 0.532598659084714 NA intron (NM_013608, intron 1 of 7) CpG 447 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding common_peak1_196_143_0.156613360632363_7.24823168175849_0.532598659084714 chr19 43659301 43661072 + 0.532598659084714 NA Intergenic Intergenic 14695 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_196_143_0.156613360632363_7.24823168175849_0.532598659084714 chr3 103967519 103969057 + 0.532598659084714 NA promoter-TSS (NR_030676) promoter-TSS (NR_030676) 28 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak1_197_143_0.163866626036413_7.25185831446052_0.532598659084714 chr7 45523794 45526185 + 0.532598659084714 NA exon (NM_008654, exon 2 of 3) exon (NM_008654, exon 2 of 3) 1279 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak1_120_85_0.202046006274227_6.52728775783921_0.532562714954118-2 chr11 103689629 103691218 + 0.532562714954118 NA intron (NM_019650, intron 1 of 5) intron (NM_019650, intron 1 of 5) 7287 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak1_120_85_0.202046006274227_6.52728775783921_0.532562714954118 chr11 23770065 23771597 + 0.532562714954118 NA 5' UTR (NM_009044, exon 1 of 10) 5' UTR (NM_009044, exon 1 of 10) 139 NM_009044 19696 Mm.4869 NM_009044 ENSMUSG00000020275 Rel c-Rel reticuloendotheliosis oncogene protein-coding common_peak2_103_99_-0.2324279744661_6.52764220254167_0.532562714954094 chr2 31454573 31455388 + 0.532562714954094 NA Intergenic Intergenic -15290 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak1_103_99_-0.2324279744661_6.52764220254167_0.532562714954094 chr1 33756592 33757994 + 0.532562714954094 NA intron (NM_145392, intron 1 of 2) intron (NM_145392, intron 1 of 2) 457 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding common_peak1_62_42_0.267105543544736_5.55981752647447_0.532475415427916-4 chr6 124808810 124809537 + 0.532475415427916 NA intron (NM_013539, intron 1 of 2) intron (NM_013539, intron 1 of 2) 255 NM_001306053 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding common_peak2_50_52_-0.337253994999292_5.55929345706355_0.532475415427916-4 chr8 126618898 126619630 + 0.532475415427916 NA Intergenic Intergenic -25828 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_62_42_0.267105543544736_5.55981752647447_0.532475415427916-3 chr3 95281293 95281739 + 0.532475415427916 NA intron (NM_173347, intron 1 of 7) CpG 560 NM_173347 229589 Mm.14155 NM_173347 ENSMUSG00000015711 Prune1 9230112O05Rik|C130058A12|DRES-17|HTCD37|PRUNEM1|Prune|Prune-M1 prune exopolyphosphatase protein-coding common_peak2_50_52_-0.337253994999292_5.55929345706355_0.532475415427916 chr17 42908606 42909196 + 0.532475415427916 NA Intergenic Intergenic -32477 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak1_62_42_0.267105543544736_5.55981752647447_0.532475415427916-2 chr2 145903210 145903723 + 0.532475415427916 NA intron (NM_026425, intron 1 of 5) CpG 225 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding unique_peak2_50_52_-0.337253994999292_5.55929345706355_0.532475415427916 chr1 153100848 153101759 + 0.532475415427916 NA intron (NM_175460, intron 8 of 10) intron (NM_175460, intron 8 of 10) 85144 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_50_52_-0.337253994999292_5.55929345706355_0.532475415427916-3 chr8 84199713 84200602 + 0.532475415427916 NA Intergenic Intergenic -8361 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_50_52_-0.337253994999292_5.55929345706355_0.532475415427916-2 chr3 122481327 122482293 + 0.532475415427916 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -1759 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak1_62_42_0.267105543544736_5.55981752647447_0.532475415427916 chr2 34799375 34800257 + 0.532475415427916 NA promoter-TSS (NM_145522) promoter-TSS (NM_145522) 96 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-6 chr3 138766804 138767033 + 0.532159081577619 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 24710 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-3 chr15 27325503 27325917 + 0.532159081577619 NA Intergenic MIR|SINE|MIR -140967 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-8 chr3 41284185 41284781 + 0.532159081577619 NA Intergenic B3|SINE|B2 -201437 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-2 chr1 71912828 71913127 + 0.532159081577619 NA Intergenic Intergenic 24865 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-6 chr11 12409292 12409586 + 0.532159081577619 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 2701 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-8 chr2 90904845 90905275 + 0.532159081577619 NA promoter-TSS (NM_026688) promoter-TSS (NM_026688) 58 NM_001361372 67136 Mm.330394 NM_025991 ENSMUSG00000005505 Kbtbd4 2510026C23Rik kelch repeat and BTB (POZ) domain containing 4 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-4 chr17 17624178 17624425 + 0.532159081577619 NA intron (NM_172827, intron 1 of 17) CpG 188 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-17 chr3 88717078 88717497 + 0.532159081577619 NA intron (NM_001163310, intron 1 of 4) intron (NM_001163310, intron 1 of 4) 433 NR_028056 19769 Mm.4009 NM_009069 ENSMUSG00000028057 Rit1 RIBB|ROC1|Rit Ras-like without CAAX 1 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-11 chr6 127991326 127991516 + 0.532159081577619 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 103799 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-4 chr2 122737984 122738187 + 0.532159081577619 NA promoter-TSS (NM_019788) promoter-TSS (NM_019788) -420 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-24 chrX 133604749 133605079 + 0.532159081577619 NA intron (NM_001105245, intron 5 of 5) intron (NM_001105245, intron 5 of 5) -82866 NR_153117 102632590 Mm.403836 NR_153117 ENSMUSG00000096978 Gm26851 - predicted gene, 26851 ncRNA unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-7 chr11 97739750 97740150 + 0.532159081577619 NA intron (NM_054051, intron 1 of 9) intron (NM_054051, intron 1 of 9) 4754 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-6 chr17 26502418 26502846 + 0.532159081577619 NA Intergenic Intergenic 5840 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-2 chr10 7141814 7142203 + 0.532159081577619 NA intron (NM_172546, intron 5 of 12) intron (NM_172546, intron 5 of 12) 70229 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-11 chr4 155735156 155735547 + 0.532159081577619 NA intron (NM_001101506, intron 1 of 3) CpG 547 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-4 chr1 189889513 189889816 + 0.532159081577619 NA intron (NM_026796, intron 6 of 11) intron (NM_026796, intron 6 of 11) 32627 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-19 chr7 19817701 19818184 + 0.532159081577619 NA intron (NM_033601, intron 2 of 8) intron (NM_033601, intron 2 of 8) 4813 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619 chr1 64944719 64945052 + 0.532159081577619 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 11939 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-22 chr7 129763978 129764485 + 0.532159081577619 NA Intergenic Intergenic 172368 NM_172255 207425 Mm.229323 NM_172255 ENSMUSG00000042055 Wdr11 2900055P10Rik|AW489876|Brwd2|mKIAA1351 WD repeat domain 11 protein-coding unique_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-2 chr9 21723202 21723448 + 0.532159081577619 NA promoter-TSS (NM_010700) promoter-TSS (NM_010700) -251 NM_001252658 16835 Mm.3213 NM_010700 ENSMUSG00000032193 Ldlr Hlb301 low density lipoprotein receptor protein-coding common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-8 chr7 125707479 125707717 + 0.532159081577619 NA promoter-TSS (NM_207239) promoter-TSS (NM_207239) 90 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding common_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619 chr13 75798128 75798363 + 0.532159081577619 NA Intergenic Intergenic -41640 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-7 chr17 35235485 35235831 + 0.532159081577619 NA promoter-TSS (NM_023179) promoter-TSS (NM_023179) 157 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-3 chr13 71149312 71149724 + 0.532159081577619 NA Intergenic Intergenic 42429 NR_130325 100316804 NR_130325 ENSMUSG00000080580 Mir466f-4 Mirn466f-4|mmu-mir-466f-4 microRNA 466f-4 ncRNA common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-16 chr6 38874788 38875152 + 0.532159081577619 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 1220 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-4 chr10 37139986 37140503 + 0.532159081577619 NA Intergenic Intergenic -1318 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-12 chr5 3345201 3345425 + 0.532159081577619 NA intron (NM_009873, intron 2 of 7) intron (NM_009873, intron 2 of 7) 1420 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-25 chrX 166440307 166440602 + 0.532159081577619 NA promoter-TSS (NM_025432) promoter-TSS (NM_025432) 250 NM_177429 237222 Mm.247480 NM_177429 ENSMUSG00000040586 Ofd1 Cxorf5|DXGgc7e|ORF2 OFD1, centriole and centriolar satellite protein protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-10 chr8 18647059 18647362 + 0.532159081577619 NA intron (NM_173189, intron 9 of 13) intron (NM_173189, intron 9 of 13) 52079 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-6 chr19 28363171 28363436 + 0.532159081577619 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -314921 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-5 chr2 173251249 173251497 + 0.532159081577619 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 25160 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-13 chr5 77356633 77357021 + 0.532159081577619 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 46343 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-6 chr9 31386342 31386684 + 0.532159081577619 NA intron (NM_001359654, intron 1 of 25) CpG 321 NM_001359654 235134 Mm.238146 NM_172766 ENSMUSG00000042185 Nfrkb A530090G11Rik nuclear factor related to kappa B binding protein protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-9 chr7 113163240 113163810 + 0.532159081577619 NA Intergenic Intergenic -21510 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-12 chr15 96406335 96406658 + 0.532159081577619 NA Intergenic Intergenic 54347 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-3 chr1 91490112 91490485 + 0.532159081577619 NA Intergenic Intergenic -4370 NM_028718 74019 Mm.318430 NM_028718 ENSMUSG00000034292 Traf3ip1 3930402D05Rik|AU041749|MIP-T3 TRAF3 interacting protein 1 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-10 chr5 29853703 29854248 + 0.532159081577619 NA Intergenic Intergenic -118039 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-14 chr5 93104574 93104872 + 0.532159081577619 NA intron (NM_001009818, intron 1 of 9) Lx8|LINE|L1 11307 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-5 chr10 111672214 111672435 + 0.532159081577619 NA Intergenic Intergenic -78051 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619 chr1 23203272 23203585 + 0.532159081577619 NA Intergenic Intergenic -68841 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-4 chr15 62125064 62125339 + 0.532159081577619 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 85944 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619 chr10 32889966 32890180 + 0.532159081577619 NA promoter-TSS (NM_001013411) promoter-TSS (NM_001013411) -158 NM_001025286 432450 Mm.49665 NM_001013411 ENSMUSG00000069670 Nkain2 6330571D19Rik|AW455467|Tcba1 Na+/K+ transporting ATPase interacting 2 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-6 chr16 55967232 55967629 + 0.532159081577619 NA intron (NM_024218, intron 3 of 5) intron (NM_024218, intron 3 of 5) 1155 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-15 chr5 124598921 124599238 + 0.532159081577619 NA intron (NM_026486, intron 1 of 18) intron (NM_026486, intron 1 of 18) 330 NM_026486 67978 Mm.1158 NM_026486 Tctn2 4432405B04Rik|Tect2 tectonic family member 2 protein-coding common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-3 chr15 84450951 84451179 + 0.532159081577619 NA Intergenic Intergenic -3968 NM_001163145 72301 Mm.275387 NM_001163145 ENSMUSG00000062760 1810041L15Rik Kiaa1644|Shisal1 RIKEN cDNA 1810041L15 gene protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-13 chr19 4096815 4097064 + 0.532159081577619 NA promoter-TSS (NM_026373) promoter-TSS (NM_026373) -412 NM_026373 52004 Mm.29609 NM_026373 ENSMUSG00000024856 Cdk2ap2 5830466O21Rik|D19Ertd144e|Doc-1r CDK2-associated protein 2 protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-7 chr17 75251818 75252255 + 0.532159081577619 NA intron (NM_019919, intron 8 of 33) intron (NM_019919, intron 8 of 33) 73255 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-23 chr9 83973164 83973760 + 0.532159081577619 NA intron (NM_199195, intron 3 of 10) intron (NM_199195, intron 3 of 10) 24681 NM_199195 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-18 chr4 136117372 136117700 + 0.532159081577619 NA Intergenic Intergenic -26286 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-21 chr7 102267921 102268331 + 0.532159081577619 NA 5' UTR (NM_009287, exon 1 of 12) 5' UTR (NM_009287, exon 1 of 12) 302 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-10 chr3 95014321 95014678 + 0.532159081577619 NA intron (NM_001357863, intron 1 of 8) intron (NM_001357863, intron 1 of 8) 739 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-4 chr7 100121829 100122026 + 0.532159081577619 NA promoter-TSS (NM_133692) promoter-TSS (NM_133692) -427 NM_133692 67967 Mm.37562 NM_133692 ENSMUSG00000030726 Pold3 2410142G14Rik|C85233|P66|P68 polymerase (DNA-directed), delta 3, accessory subunit protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-3 chr1 131528072 131528603 + 0.532159081577619 NA promoter-TSS (NM_001081011) promoter-TSS (NM_001081011) 434 NM_175382 108900 Mm.31278 NM_175382 ENSMUSG00000055184 Fam72a 2700049P18Rik|P17 family with sequence similarity 72, member A protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619 chr1 71880866 71881114 + 0.532159081577619 NA Intergenic Intergenic -7122 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-5 chr12 81781358 81781621 + 0.532159081577619 NA promoter-TSS (NM_177395) promoter-TSS (NM_177395) -319 NM_001174107 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-8 chr12 103682100 103682309 + 0.532159081577619 NA Intergenic Intergenic -5442 NM_001310472 194604 NM_001310472 ENSMUSG00000071179 Serpina16 Gm46 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 protein-coding common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-7 chr6 93724337 93724641 + 0.532159081577619 NA intron (NM_001029850, intron 12 of 23) intron (NM_001029850, intron 12 of 23) 188474 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-10 chr14 7808430 7808640 + 0.532159081577619 NA Intergenic Intergenic -9422 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-12 chr8 109737910 109738247 + 0.532159081577619 NA promoter-TSS (NM_001080930) promoter-TSS (NM_001080930) -339 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-19 chr5 36383585 36383934 + 0.532159081577619 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 14380 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding unique_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619 chr16 26401689 26401969 + 0.532159081577619 NA Intergenic Intergenic -29990 NM_016674 12737 Mm.289441 NM_016674 ENSMUSG00000022512 Cldn1 AI596271 claudin 1 protein-coding common_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-5 chr8 126597641 126597941 + 0.532159081577619 NA Intergenic Intergenic -4355 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-7 chr2 137005385 137005957 + 0.532159081577619 NA intron (NM_001038641, intron 4 of 7) MIR3|SINE|MIR 106320 NM_001038641 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-14 chr19 28286903 28287333 + 0.532159081577619 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -275952 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-9 chr13 4279159 4279493 + 0.532159081577619 NA promoter-TSS (NM_013777) promoter-TSS (NM_013777) 73 NM_013777 622402 Mm.27447 NM_013777 ENSMUSG00000021211 Akr1c12 AI266976|Akra aldo-keto reductase family 1, member C12 protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-9 chr3 128455568 128456027 + 0.532159081577619 NA Intergenic Intergenic -224192 NR_045704 402774 Mm.209170 NR_045704 ENSMUSG00000105816 D030025E07Rik - RIKEN cDNA D030025E07 gene ncRNA common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-13 chr9 22070929 22071149 + 0.532159081577619 NA promoter-TSS (NR_040406) promoter-TSS (NR_040406) 37 NR_040407 100503652 Mm.439941 NR_040406 ENSMUSG00000096981 Gm16845 - predicted gene, 16845 ncRNA unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-11 chr14 77874526 77874731 + 0.532159081577619 NA intron (NM_025384, intron 1 of 5) intron (NM_025384, intron 1 of 5) 289 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-20 chr7 37653384 37653753 + 0.532159081577619 NA intron (NM_172385, intron 2 of 5) intron (NM_172385, intron 2 of 5) 116184 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619 chr1 88697775 88698062 + 0.532159081577619 NA TTS (NM_177305) TTS (NM_177305) 4273 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-2 chr14 41421316 41421672 + 0.532159081577619 NA Intergenic Intergenic -151717 NM_001358037 100041722 Mm.425891 NM_001358037 ENSMUSG00000090440 1700049E17Rik2 - tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2 protein-coding unique_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-5 chr15 81168599 81169158 + 0.532159081577619 NA intron (NM_001082536, intron 1 of 13) intron (NM_001082536, intron 1 of 13) 21879 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619 chr17 13867272 13867596 + 0.532159081577619 NA intron (NR_151731, intron 22 of 33) intron (NR_151731, intron 22 of 33) -80939 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding common_peak2_23_14_0.403985050836731_4.10888312102688_0.532159081577619-2 chr15 41728570 41728902 + 0.532159081577619 NA intron (NR_152565, intron 3 of 17) ID4|SINE|ID -60259 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-18 chr7 4793929 4794248 + 0.532159081577619 NA exon (NM_009081, exon 4 of 5) exon (NM_009081, exon 4 of 5) 1123 NM_009081 19943 Mm.379002 NM_009081 ENSMUSG00000030432 Rpl28 D7Wsu21e ribosomal protein L28 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-9 chr3 88296601 88296868 + 0.532159081577619 NA promoter-TSS (NM_009836) promoter-TSS (NM_009836) 104 NM_029801 76927 Mm.273330 NM_029801 ENSMUSG00000010538 Tsacc 1700021C14Rik|SIP TSSK6 activating co-chaperone protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-15 chr2 30848593 30848890 + 0.532159081577619 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 3374 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-17 chr6 81987359 81987707 + 0.532159081577619 NA Intergenic Intergenic -21584 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-2 chr11 78876382 78876846 + 0.532159081577619 NA Intergenic Intergenic -44173 NM_010927 18126 Mm.2893 NM_010927 ENSMUSG00000020826 Nos2 MAC-NOS|NOS-II|Nos-2|Nos2a|i-NOS|iNOS nitric oxide synthase 2, inducible protein-coding common_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-8 chr19 10116068 10116263 + 0.532159081577619 NA Intergenic Intergenic -14662 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-3 chr5 104374607 104374926 + 0.532159081577619 NA Intergenic Intergenic 49437 NM_053172 94111 Mm.196672 NM_053172 ENSMUSG00000053863 Mepe Of45 matrix extracellular phosphoglycoprotein with ASARM motif (bone) protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-20 chr7 4865851 4866129 + 0.532159081577619 NA intron (NM_026158, intron 1 of 5) CpG 189 NM_026158 67441 Mm.41385 NM_026158 ENSMUSG00000052605 Isoc2b 0610042E07Rik|AI553388|Isoc2 isochorismatase domain containing 2b protein-coding common_peak2_16_20_-0.575431585869065_4.10460162984423_0.532159081577619-5 chr19 18746378 18746687 + 0.532159081577619 NA Intergenic PB1D7|SINE|Alu -3451 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-16 chr2 38925928 38926344 + 0.532159081577619 NA exon (NM_010264, exon 1 of 11) exon (NM_010264, exon 1 of 11) 325 NM_010264 14536 Mm.439703 NM_010264 ENSMUSG00000063972 Nr6a1 1700113M01Rik|Gcnf|NCNF|RTR nuclear receptor subfamily 6, group A, member 1 protein-coding unique_peak1_23_14_0.403985050836731_4.10888312102688_0.532159081577619-2 chr1 93678798 93679425 + 0.532159081577619 NA Intergenic Intergenic -6464 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak1_266_239_-0.144802746554379_7.83448922233133_0.531600335192869 chr10 108161315 108163439 + 0.531600335192869 NA promoter-TSS (NM_027892) promoter-TSS (NM_027892) -23 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_75_74_-0.266710215523978_6.09546358273389_0.531249876599858-3 chr7 81763004 81763633 + 0.531249876599858 NA intron (NM_025997, intron 1 of 2) CpG 365 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding common_peak2_75_74_-0.266710215523978_6.09546358273389_0.531249876599858 chr16 70313783 70314721 + 0.531249876599858 NA exon (NM_028803, exon 1 of 16) exon (NM_028803, exon 1 of 16) 303 NM_028803 74185 Mm.396102 NM_028803 ENSMUSG00000022707 Gbe1 2310045H19Rik|2810426P10Rik|D16Ertd536e glucan (1,4-alpha-), branching enzyme 1 protein-coding common_peak2_75_74_-0.266710215523978_6.09546358273389_0.531249876599858-2 chr5 130221954 130222792 + 0.531249876599858 NA promoter-TSS (NM_027854) promoter-TSS (NM_027854) 38 NM_027854 71667 Mm.258508 NM_027854 ENSMUSG00000053094 Tmem248 0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik transmembrane protein 248 protein-coding common_peak1_75_74_-0.266710215523978_6.09546358273389_0.531249876599858-2 chr2 75831931 75833080 + 0.531249876599858 NA exon (NM_172666, exon 1 of 20) exon (NM_172666, exon 1 of 20) 328 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding common_peak1_75_74_-0.266710215523978_6.09546358273389_0.531249876599858-3 chr5 124440009 124440835 + 0.531249876599858 NA intron (NM_001310725, intron 1 of 6) intron (NM_001310725, intron 1 of 6) 492 NM_001310725 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_75_74_-0.266710215523978_6.09546358273389_0.531249876599858 chr15 73423400 73423841 + 0.531249876599858 NA promoter-TSS (NM_001358045) promoter-TSS (NM_001358045) -429 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_74_74_-0.285684226116118_6.08597657743782_0.531249876599858 chr18 60652820 60654084 + 0.531249876599858 NA Intergenic L1MA5|LINE|L1 -9958 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_74_74_-0.285684226116118_6.08597657743782_0.531249876599858 chr16 91647111 91647650 + 0.531249876599858 NA promoter-TSS (NM_178880) promoter-TSS (NM_178880) -408 NM_001357351 14450 Mm.4505 NM_010256 ENSMUSG00000022962 Gart Gaps|Prgs phosphoribosylglycinamide formyltransferase protein-coding common_peak2_74_74_-0.285684226116118_6.08597657743782_0.531249876599858-2 chr2 158360632 158361441 + 0.531249876599858 NA non-coding (NR_027887, exon 2 of 6) non-coding (NR_027887, exon 2 of 6) 473 NR_015463 68108 Mm.119198 NR_015463 Snhg17 9430008C03Rik small nucleolar RNA host gene 17 ncRNA common_peak1_89_62_0.227033244353422_6.09079654567663_0.531249876599846 chr10 71147176 71148533 + 0.531249876599846 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 11836 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_89_62_0.227033244353422_6.09079654567663_0.531249876599846-2 chr19 46507065 46508182 + 0.531249876599846 NA intron (NM_053100, intron 1 of 5) intron (NM_053100, intron 1 of 5) 5975 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_89_62_0.227033244353422_6.09079654567663_0.531249876599846 chr16 96127093 96127816 + 0.531249876599846 NA exon (NM_008251, exon 2 of 6) exon (NM_008251, exon 2 of 6) 271 NM_008251 15312 Mm.2756 NM_008251 ENSMUSG00000040681 Hmgn1 HMG-14|Hmg14 high mobility group nucleosomal binding domain 1 protein-coding common_peak1_409_306_0.11441166183765_8.319300676289_0.531174498285866 chr2 137113590 137116570 + 0.531174498285866 NA intron (NM_013822, intron 2 of 25) intron (NM_013822, intron 2 of 25) 1440 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_156_145_-0.188407247855611_7.09562093495221_0.531052608802876 chr15 102073898 102074868 + 0.531052608802876 NA intron (NM_145625, intron 1 of 14) CpG 610 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak2_121_86_0.197157593880904_6.54152229278918_0.530068371578828 chr8 106059683 106060355 + 0.530068371578828 NA intron (NM_010901, intron 1 of 9) CpG 416 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_121_86_0.197157593880904_6.54152229278918_0.530068371578828 chr16 32877244 32878786 + 0.530068371578828 NA intron (NM_001356387, intron 1 of 7) CpG 231 NM_001159349 69823 Mm.12831 NM_027226 ENSMUSG00000022800 Fyttd1 2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190 forty-two-three domain containing 1 protein-coding common_peak1_51_34_0.289200177936903_5.27388310591342_0.529980592868312-3 chr4 132421970 132422511 + 0.529980592868312 NA intron (NM_001161797, intron 1 of 12) CpG 206 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312 chr11 26593378 26594009 + 0.529980592868312 NA 5' UTR (NM_001252447, exon 1 of 12) 5' UTR (NM_001252447, exon 1 of 12) 227 NM_027260 69922 Mm.285351 NM_027260 ENSMUSG00000064090 Vrk2 2810003O05Rik|AI447698 vaccinia related kinase 2 protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312-7 chr8 79490962 79491334 + 0.529980592868312 NA Intergenic Intergenic -91680 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak1_51_34_0.289200177936903_5.27388310591342_0.529980592868312-4 chr5 31220791 31221328 + 0.529980592868312 NA promoter-TSS (NM_008014) promoter-TSS (NM_008014) -514 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312-6 chr8 23037982 23038425 + 0.529980592868312 NA intron (NM_001277284, intron 1 of 42) intron (NM_001277284, intron 1 of 42) 3104 NM_001277284 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312-3 chr16 92904416 92905430 + 0.529980592868312 NA Intergenic Intergenic -78849 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_51_34_0.289200177936903_5.27388310591342_0.529980592868312 chr10 40349540 40350029 + 0.529980592868312 NA intron (NM_001291816, intron 1 of 11) CpG 476 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_51_34_0.289200177936903_5.27388310591342_0.529980592868312-2 chr11 32533384 32533916 + 0.529980592868312 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 384 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312-5 chr7 132859268 132859709 + 0.529980592868312 NA intron (NM_198017, intron 1 of 8) CpG 263 NM_198017 109359 Mm.274824 NM_198017 ENSMUSG00000030965 Abraxas2 AA589499|AI853413|Abro1|C430003P19Rik|Fam175b BRISC complex subunit protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312-4 chr6 29164015 29164782 + 0.529980592868312 NA intron (NM_133925, intron 1 of 18) PB1D9|SINE|Alu 326 NM_133925 68272 Mm.40802 NM_026650 ENSMUSG00000029701 Rbm28 2810480G15Rik|AI503051 RNA binding motif protein 28 protein-coding common_peak2_51_34_0.289200177936903_5.27388310591342_0.529980592868312-2 chr16 10411941 10412282 + 0.529980592868312 NA exon (NM_011955, exon 2 of 11) exon (NM_011955, exon 2 of 11) 173 NM_011955 26425 Mm.29037 NM_011955 ENSMUSG00000022503 Nubp1 - nucleotide binding protein 1 protein-coding common_peak1_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-4 chr5 122263909 122264342 + 0.529980592868306 NA intron (NR_104441, intron 1 of 12) intron (NR_104441, intron 1 of 12) 335 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak2_40_43_-0.381417071463615_5.26872308290549_0.529980592868306 chr10 93799237 93799883 + 0.529980592868306 NA Intergenic Intergenic -31995 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding common_peak1_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-6 chr8 25304556 25304877 + 0.529980592868306 NA non-coding (NR_040352, exon 3 of 3) non-coding (NR_040352, exon 3 of 3) 1554 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak2_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-2 chr15 11795108 11795539 + 0.529980592868306 NA Intergenic Intergenic 110351 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-3 chr19 32180076 32180525 + 0.529980592868306 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 30713 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_40_43_-0.381417071463615_5.26872308290549_0.529980592868306 chr11 60913184 60913883 + 0.529980592868306 NA intron (NM_025294, intron 1 of 2) CpG 259 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding common_peak1_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-2 chr15 32920347 32921111 + 0.529980592868306 NA promoter-TSS (NM_008304) promoter-TSS (NM_008304) 6 NM_008304 15529 Mm.234266 NM_008304 ENSMUSG00000022261 Sdc2 4833414L08Rik|AA960457|Hspg1|Synd2|syndecan-2 syndecan 2 protein-coding common_peak1_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-5 chr6 94699443 94700037 + 0.529980592868306 NA 5' UTR (NM_008377, exon 1 of 19) 5' UTR (NM_008377, exon 1 of 19) 405 NM_001355269 16206 Mm.245210 NM_008377 ENSMUSG00000030029 Lrig1 D6Bwg0781e|Img|LIG-1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding common_peak1_40_43_-0.381417071463615_5.26872308290549_0.529980592868306-3 chr2 118112842 118113455 + 0.529980592868306 NA exon (NM_011580, exon 3 of 22) exon (NM_011580, exon 3 of 22) 1272 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_62_63_-0.306629701753166_5.84668514912342_0.529856340941694 chr8 105826409 105827121 + 0.529856340941694 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) 585 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak2_62_63_-0.306629701753166_5.84668514912342_0.529856340941694-4 chr9 102650548 102651498 + 0.529856340941694 NA Intergenic Intergenic 24727 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_62_63_-0.306629701753166_5.84668514912342_0.529856340941694-3 chr8 84711874 84712607 + 0.529856340941694 NA intron (NM_001081982, intron 9 of 9) intron (NM_001081982, intron 9 of 9) 10783 NM_008535 17095 Mm.4925 NM_008535 ENSMUSG00000034041 Lyl1 Lyl-1|bHLHa18 lymphoblastomic leukemia 1 protein-coding common_peak2_62_63_-0.306629701753166_5.84668514912342_0.529856340941694 chr14 28960449 28961264 + 0.529856340941694 NA intron (NM_009785, intron 31 of 37) intron (NM_009785, intron 31 of 37) -57352 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak2_62_63_-0.306629701753166_5.84668514912342_0.529856340941694-2 chr3 52069230 52070500 + 0.529856340941694 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 35141 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak1_76_52_0.25291399760799_5.85437745336719_0.529856340941682-2 chr3 132871683 132872298 + 0.529856340941682 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 6606 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_76_52_0.25291399760799_5.85437745336719_0.529856340941682 chr15 56840472 56841483 + 0.529856340941682 NA Intergenic Intergenic -146431 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak2_76_52_0.25291399760799_5.85437745336719_0.529856340941682 chr8 68190965 68191677 + 0.529856340941682 NA Intergenic Intergenic -85207 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak1_76_52_0.25291399760799_5.85437745336719_0.529856340941682-3 chr7 44816455 44817072 + 0.529856340941682 NA promoter-TSS (NR_033136) promoter-TSS (NR_033136) -105 NR_033136 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding common_peak2_177_163_-0.176299757791401_7.26940212572238_0.5295878199499 chr1 88698267 88700810 + 0.5295878199499 NA 3' UTR (NM_177305, exon 1 of 1) 3' UTR (NM_177305, exon 1 of 1) 2653 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_177_163_-0.176299757791401_7.26940212572238_0.5295878199499 chr14 21830524 21832098 + 0.5295878199499 NA promoter-TSS (NM_011695) promoter-TSS (NM_011695) -250 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding common_peak1_157_146_-0.189159658134332_7.1050925157692_0.529377573067446 chr4 141546223 141547084 + 0.529377573067446 NA non-coding (NR_030695, exon 1 of 1) non-coding (NR_030695, exon 1 of 1) 491 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_105_74_0.209896385200736_6.33376688309625_0.52921549434918-3 chr18 80532947 80534315 + 0.52921549434918 NA Intergenic B2_Mm2|SINE|B2 10915 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_105_74_0.209896385200736_6.33376688309625_0.52921549434918-2 chr8 75034407 75035055 + 0.52921549434918 NA intron (NM_001136259, intron 1 of 15) intron (NM_001136259, intron 1 of 15) 1045 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding common_peak1_105_74_0.209896385200736_6.33376688309625_0.52921549434918-2 chr11 120347735 120348468 + 0.52921549434918 NA promoter-TSS (NR_105900) promoter-TSS (NR_105900) 394 NM_001313923 11465 Mm.196173 NM_009609 ENSMUSG00000062825 Actg1 AL023024|Actg|Actl|E51 actin, gamma, cytoplasmic 1 protein-coding common_peak1_105_74_0.209896385200736_6.33376688309625_0.52921549434918 chr1 130717036 130718145 + 0.52921549434918 NA exon (NM_178691, exon 1 of 2) exon (NM_178691, exon 1 of 2) 263 NM_178691 226418 Mm.106553 NM_178691 ENSMUSG00000046404 Yod1 6330564D18Rik|9930028C20Rik|Hshin7 YOD1 deubiquitinase protein-coding common_peak2_105_74_0.209896385200736_6.33376688309625_0.52921549434918 chr13 113687040 113688128 + 0.52921549434918 NA Intergenic Intergenic -23908 NM_019960 56534 Mm.41410 NM_019960 ENSMUSG00000051456 Hspb3 2310035K17Rik|AI844863|Hsbp3|spb3 heat shock protein 3 protein-coding common_peak2_89_87_-0.255118450783958_6.33187239324532_0.52921549434918 chr10 80071486 80072616 + 0.52921549434918 NA intron (NM_001359635, intron 5 of 31) ID_B1|SINE|B4 3388 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_139_130_-0.196176968138134_6.93533451746838_0.529020163271982 chr5 34336391 34337595 + 0.529020163271982 NA promoter-TSS (NM_001304270) promoter-TSS (NM_001304270) 61 NM_001304270 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak2_158_114_0.174060626979696_6.93252036443422_0.529020163271982 chr16 90283597 90284947 + 0.529020163271982 NA 5' UTR (NM_178923, exon 1 of 20) 5' UTR (NM_178923, exon 1 of 20) 214 NM_001346799 224432 Mm.439811 NM_178923 ENSMUSG00000022983 Scaf4 AA517739|Sfrs15|Sra4|Srsf15 SR-related CTD-associated factor 4 protein-coding common_peak2_138_130_-0.206445950154364_6.93020002646027_0.529020163271982 chr3 65926919 65927893 + 0.529020163271982 NA Intergenic Intergenic 30843 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_138_130_-0.206445950154364_6.93020002646027_0.529020163271982 chr14 26669135 26670727 + 0.529020163271982 NA promoter-TSS (NR_106132) promoter-TSS (NR_106132) -85 NM_178668 211948 Mm.290758 NM_178668 ENSMUSG00000043702 Pde12 2'-PDE|E430028B21Rik phosphodiesterase 12 protein-coding common_peak2_158_114_0.174060626979696_6.93252036443422_0.529020163271982-2 chr5 125140297 125141679 + 0.529020163271982 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 38226 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_221_201_-0.160525098613387_7.5779489334451_0.528513299872739 chr3 121722727 121724771 + 0.528513299872739 NA exon (NM_010171, exon 1 of 6) exon (NM_010171, exon 1 of 6) 212 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_121_115_-0.21787990539794_6.7490410424286_0.528461822230224-3 chr9 57437424 57439039 + 0.528461822230224 NA intron (NR_152146, intron 1 of 5) intron (NR_152146, intron 1 of 5) 1505 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_121_115_-0.21787990539794_6.7490410424286_0.528461822230224-2 chr8 126596504 126597390 + 0.528461822230224 NA Intergenic Intergenic -3511 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_121_115_-0.21787990539794_6.7490410424286_0.528461822230224 chr8 66860302 66861367 + 0.528461822230224 NA exon (NM_001163564, exon 1 of 8) exon (NM_001163564, exon 1 of 8) 617 NM_001163564 234344 Mm.334561 NM_001163564 ENSMUSG00000014907 Naf1 Gm174 nuclear assembly factor 1 ribonucleoprotein protein-coding common_peak1_743_637_-0.0872924107043662_9.27376640841269_0.528382580021895 chr8 36609986 36613920 + 0.528382580021895 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 1990 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_222_163_0.146572668366133_7.43083833880115_0.528362830586554 chr5 129786571 129788163 + 0.528362830586554 NA promoter-TSS (NM_009838) promoter-TSS (NM_009838) 11 NM_009838 12466 Mm.153159 NM_009838 Cct6a CCT-zeta|CCT-zeta-1|Cct6|Cctz-1|TCP-1-zeta chaperonin containing Tcp1, subunit 6a (zeta) protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-4 chr16 16599285 16599547 + 0.528262014464657 NA intron (NM_001301817, intron 1 of 16) intron (NM_001301817, intron 1 of 16) 562 NM_001301817 224014 Mm.256131 NM_139232 ENSMUSG00000022788 Fgd4 9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-9 chr6 85069142 85069436 + 0.528262014464657 NA intron (NM_177077, intron 1 of 21) CpG 224 NM_177077 75914 Mm.159621 NM_177077 ENSMUSG00000033769 Exoc6b 4930569O18Rik|G430127E12Rik|Sec15b|Sec15l2|mKIAA0919 exocyst complex component 6B protein-coding unique_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-2 chr10 60351240 60351833 + 0.528262014464657 NA intron (NM_028732, intron 1 of 6) intron (NM_028732, intron 1 of 6) 4685 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding unique_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-6 chr9 119092565 119093094 + 0.528262014464657 NA intron (NM_019676, intron 1 of 14) intron (NM_019676, intron 1 of 14) 673 NR_121571 18799 Mm.23963 NM_019676 ENSMUSG00000010660 Plcd1 AW212592|C79986 phospholipase C, delta 1 protein-coding unique_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-4 chr16 17233616 17234097 + 0.528262014464657 NA intron (NM_178922, intron 1 of 2) CpG 269 NM_178922 58180 Mm.261602 NM_178922 ENSMUSG00000050240 Hic2 AA409108|HRG22|mKIAA1020 hypermethylated in cancer 2 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-11 chr7 109616139 109616420 + 0.528262014464657 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 289 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-5 chr2 16451669 16452189 + 0.528262014464657 NA intron (NM_026162, intron 1 of 13) intron (NM_026162, intron 1 of 13) 95625 NM_026162 67448 Mm.313938 NM_026162 ENSMUSG00000026748 Plxdc2 1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r plexin domain containing 2 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-6 chr4 135874138 135874553 + 0.528262014464657 NA promoter-TSS (NM_026383) promoter-TSS (NM_026383) -499 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-3 chr2 30744313 30744757 + 0.528262014464657 NA Intergenic Intergenic 23325 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-9 chr8 120062123 120062811 + 0.528262014464657 NA Intergenic MER5A1|DNA|hAT-Charlie 39005 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-4 chr3 96264213 96264590 + 0.528262014464657 NA Intergenic Intergenic -1084 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657 chr11 99454357 99454825 + 0.528262014464657 NA Intergenic Intergenic -16438 NM_023256 66809 Mm.28042 NM_023256 ENSMUSG00000035775 Krt20 9030623C06Rik|Ck-20|Ck20|K20|Krt21 keratin 20 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-12 chrX 38600768 38601099 + 0.528262014464657 NA promoter-TSS (NM_001356360) promoter-TSS (NM_001356360) -326 NM_001361382 68995 Mm.262453 NM_026902 ENSMUSG00000000355 Mcts1 1500019M23Rik|MCT-1 malignant T cell amplified sequence 1 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-8 chr6 4903391 4903863 + 0.528262014464657 NA intron (NM_181595, intron 1 of 15) CpG 307 NM_181595 243725 Mm.332901 NM_181595 ENSMUSG00000032827 Ppp1r9a 2810430P21Rik|4930518N04Rik|5330407E15|A230094E16Rik|BB181831|NRB|mKIAA1222|neurabin-I protein phosphatase 1, regulatory (inhibitor) subunit 9A protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-2 chr12 102415803 102416492 + 0.528262014464657 NA intron (NM_011175, intron 2 of 13) intron (NM_011175, intron 2 of 13) 23666 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-5 chr3 99141068 99141288 + 0.528262014464657 NA promoter-TSS (NM_027462) promoter-TSS (NM_027462) 88 NM_027462 70560 Mm.316754 NM_027462 ENSMUSG00000004233 Wars2 5730427B17Rik|9430020O07Rik|AI413375|TrpRS tryptophanyl tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-11 chr9 59723085 59723657 + 0.528262014464657 NA Intergenic Intergenic 15607 NM_001033498 546134 Mm.297580 NM_001033498 ENSMUSG00000074259 Gramd2 BC064463|Gramd2a GRAM domain containing 2 protein-coding unique_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-3 chr10 71134036 71135066 + 0.528262014464657 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 25139 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657 chr17 15023864 15024117 + 0.528262014464657 NA Intergenic CpG -13806 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-10 chr7 35318071 35318335 + 0.528262014464657 NA intron (NM_026181, intron 1 of 19) CpG 237 NM_026181 67471 Mm.358705 NM_026181 ENSMUSG00000063808 Gpatch1 1300003A17Rik|ECGP|Gpatc1 G patch domain containing 1 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-12 chrX 38600765 38601139 + 0.528262014464657 NA promoter-TSS (NM_001356360) promoter-TSS (NM_001356360) -307 NM_001361382 68995 Mm.262453 NM_026902 ENSMUSG00000000355 Mcts1 1500019M23Rik|MCT-1 malignant T cell amplified sequence 1 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-8 chr4 130104820 130105057 + 0.528262014464657 NA Intergenic Intergenic -2618 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-2 chr17 80789333 80789637 + 0.528262014464657 NA Intergenic Intergenic -61460 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-7 chr3 84731259 84731641 + 0.528262014464657 NA Intergenic Intergenic 65258 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-3 chr14 51063558 51063868 + 0.528262014464657 NA Intergenic Intergenic -6471 NM_001011875 497106 Mm.379740 NM_001011875 ENSMUSG00000068407 Rnase12 Rai1 ribonuclease, RNase A family, 12 (non-active) protein-coding unique_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657 chr1 72781325 72781753 + 0.528262014464657 NA Intergenic Intergenic -42941 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-6 chr2 104109657 104110125 + 0.528262014464657 NA intron (NM_007652, intron 2 of 3) intron (NM_007652, intron 2 of 3) -12878 NM_026634 68243 Mm.158191 NM_026634 ENSMUSG00000032671 A930018P22Rik - RIKEN cDNA A930018P22 gene protein-coding common_peak2_32_20_0.374748561618998_4.57969170358826_0.528262014464657-7 chr5 136569238 136569543 + 0.528262014464657 NA Intergenic Intergenic -1900 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-10 chr9 32711694 32712124 + 0.528262014464657 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 15867 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_32_20_0.374748561618998_4.57969170358826_0.528262014464657-5 chr17 24885803 24886264 + 0.528262014464657 NA promoter-TSS (NM_001163750) promoter-TSS (NM_001163750) 317 NM_001355396 26426 Mm.36718 NM_011956 ENSMUSG00000039183 Nubp2 D17Wsu11e nucleotide binding protein 2 protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-8 chr9 6539286 6539723 + 0.528262014464654 NA Intergenic Intergenic -272957 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding unique_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654 chr1 133978568 133978870 + 0.528262014464654 NA Intergenic Intergenic -57318 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-5 chr2 152343797 152344087 + 0.528262014464654 NA 5' UTR (NM_175093, exon 1 of 4) 5' UTR (NM_175093, exon 1 of 4) 118 NM_175093 228775 Mm.276018 NM_144554 ENSMUSG00000032715 Trib3 Ifld2|Nipk|SINK|SKIP3|TRB-3|Trb3 tribbles pseudokinase 3 protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-2 chr11 120235601 120235965 + 0.528262014464654 NA intron (NM_198423, intron 1 of 27) CpG 2836 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-6 chr6 55176828 55177250 + 0.528262014464654 NA Intergenic Intergenic -2049 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-3 chr15 64220400 64220723 + 0.528262014464654 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 92112 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_23_27_-0.496479275612354_4.55911528425143_0.528262014464654 chr13 12257714 12258029 + 0.528262014464654 NA 5' UTR (NM_001081128, exon 1 of 33) 5' UTR (NM_001081128, exon 1 of 33) 242 NM_001081128 238505 Mm.40335 NM_001081128 ENSMUSG00000021311 Mtr AI894170|D830038K18Rik|MS 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding common_peak1_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-5 chr9 123238271 123238714 + 0.528262014464654 NA Intergenic Intergenic 22297 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding common_peak1_23_27_-0.496479275612354_4.55911528425143_0.528262014464654 chr10 121961063 121961404 + 0.528262014464654 NA intron (NM_001081037, intron 1 of 21) intron (NM_001081037, intron 1 of 21) 86082 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding unique_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-2 chr3 102373153 102373561 + 0.528262014464654 NA Intergenic Intergenic -96562 NM_001112698 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-3 chr18 73815061 73815385 + 0.528262014464654 NA intron (NM_145494, intron 1 of 15) CpG 169 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-4 chr17 46873694 46874208 + 0.528262014464654 NA Intergenic Intergenic -16670 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding unique_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-3 chr7 100120968 100121323 + 0.528262014464654 NA intron (NM_133692, intron 1 of 11) CpG 355 NM_133692 67967 Mm.37562 NM_133692 ENSMUSG00000030726 Pold3 2410142G14Rik|C85233|P66|P68 polymerase (DNA-directed), delta 3, accessory subunit protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-7 chr7 110237697 110238046 + 0.528262014464654 NA intron (NM_009302, intron 1 of 11) intron (NM_009302, intron 1 of 11) 16168 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak2_23_27_-0.496479275612354_4.55911528425143_0.528262014464654 chr11 94937665 94937937 + 0.528262014464654 NA intron (NM_007742, intron 1 of 50) intron (NM_007742, intron 1 of 50) 1577 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak1_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-2 chr17 26607413 26607719 + 0.528262014464654 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 46054 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_23_27_-0.496479275612354_4.55911528425143_0.528262014464654-4 chr2 30692657 30692927 + 0.528262014464654 NA Intergenic Intergenic -14781 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak2_91_63_0.235798322223011_6.11789916111151_0.527904843875901 chr4 138217299 138218027 + 0.527904843875901 NA intron (NM_001356432, intron 1 of 11) CpG 536 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak2_91_63_0.235798322223011_6.11789916111151_0.527904843875901-2 chr8 35916110 35916819 + 0.527904843875901 NA Intergenic Intergenic -33507 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak1_76_75_-0.267093061272396_6.11438098280739_0.527904843875901 chr11 69099217 69099898 + 0.527904843875901 NA promoter-TSS (NM_001159367) promoter-TSS (NM_001159367) -595 NM_001159367 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak1_90_63_0.220142244455999_6.110071122228_0.527904843875901-2 chr2 48948181 48949268 + 0.527904843875901 NA promoter-TSS (NM_029924) promoter-TSS (NM_029924) 543 NM_001177313 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding common_peak1_91_63_0.235798322223011_6.11789916111151_0.527904843875901 chr1 71919363 71920901 + 0.527904843875901 NA Intergenic Intergenic 32020 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_90_63_0.220142244455999_6.110071122228_0.527904843875901 chr4 3776512 3777332 + 0.527904843875901 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 58733 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_90_63_0.220142244455999_6.110071122228_0.527904843875901 chr13 59768645 59769703 + 0.527904843875901 NA promoter-TSS (NR_015349) promoter-TSS (NR_015349) 615 NM_026921 69046 Mm.7884 NM_026921 ENSMUSG00000044792 Isca1 1810010A06Rik|Hbld2 iron-sulfur cluster assembly 1 protein-coding common_peak1_90_63_0.220142244455999_6.110071122228_0.527904843875901-3 chr8 69774438 69774948 + 0.527904843875901 NA intron (NM_177899, intron 1 of 3) CpG 218 NM_177899 330788 Mm.41364 NM_177899 ENSMUSG00000043090 Zfp866 9830167H18Rik|AI875089|C85843|D330038O06Rik zinc finger protein 866 protein-coding common_peak2_91_63_0.235798322223011_6.11789916111151_0.527904843875901-3 chr8 64725577 64726660 + 0.527904843875901 NA intron (NM_025436, intron 2 of 5) intron (NM_025436, intron 2 of 5) 7460 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding common_peak2_76_75_-0.267093061272396_6.11438098280739_0.527904843875901 chr5 138085022 138085831 + 0.527904843875901 NA intron (NM_029869, intron 1 of 3) intron (NM_029869, intron 1 of 3) 342 NM_029869 74570 Mm.213114 NM_029869 ENSMUSG00000029729 Zkscan1 5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139 zinc finger with KRAB and SCAN domains 1 protein-coding common_peak2_325_242_0.123275506545398_7.98645025687848_0.527677575819538 chr8 107292892 107294951 + 0.527677575819538 NA intron (NM_001286260, intron 1 of 12) CpG 451 NM_133957 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak1_51_53_-0.336404307281599_5.58668534852267_0.527635886371667 chr9 32709591 32710315 + 0.527635886371667 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 13911 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_51_53_-0.336404307281599_5.58668534852267_0.527635886371667-2 chr9 107568851 107569462 + 0.527635886371667 NA promoter-TSS (NM_010489) promoter-TSS (NM_010489) -7 NM_010489 15587 Mm.4834 NM_010489 ENSMUSG00000010047 Hyal2 AI256841|AU020858|AW555733 hyaluronoglucosaminidase 2 protein-coding common_peak2_51_53_-0.336404307281599_5.58668534852267_0.527635886371667 chr11 6475286 6475767 + 0.527635886371667 NA exon (NM_011221, exon 1 of 1) exon (NM_011221, exon 1 of 1) 550 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak2_51_53_-0.336404307281599_5.58668534852267_0.527635886371667-2 chr15 7878249 7879003 + 0.527635886371667 NA intron (NM_001081402, intron 17 of 17) intron (NM_001081402, intron 17 of 17) 63076 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_64_43_0.27870847499845_5.59878585613652_0.527635886371654-2 chr6 93656588 93657237 + 0.527635886371654 NA Intergenic Intergenic 256051 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak1_63_43_0.25649846643401_5.5876808518543_0.527635886371654 chr1 91051959 91053108 + 0.527635886371654 NA promoter-TSS (NM_001310732) promoter-TSS (NM_001310732) -911 NM_001111311 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_63_43_0.25649846643401_5.5876808518543_0.527635886371654 chr16 4912602 4913108 + 0.527635886371654 NA intron (NM_001357062, intron 4 of 17) intron (NM_001357062, intron 4 of 17) -26256 NM_001316715 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding common_peak1_63_43_0.25649846643401_5.5876808518543_0.527635886371654-2 chr11 44944218 44945302 + 0.527635886371654 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 172168 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak1_63_43_0.25649846643401_5.5876808518543_0.527635886371654-3 chr19 10102184 10102839 + 0.527635886371654 NA Intergenic Intergenic -1008 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_64_43_0.27870847499845_5.59878585613652_0.527635886371654-4 chr8 109608470 109609367 + 0.527635886371654 NA promoter-TSS (NM_020046) promoter-TSS (NM_020046) -245 NM_020046 56749 Mm.23894 NM_020046 ENSMUSG00000031730 Dhodh 2810417D19Rik|AI834883 dihydroorotate dehydrogenase protein-coding common_peak1_63_43_0.25649846643401_5.5876808518543_0.527635886371654-4 chr3 41219655 41220799 + 0.527635886371654 NA Intergenic Intergenic -137181 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_64_43_0.27870847499845_5.59878585613652_0.527635886371654 chr15 27417442 27418097 + 0.527635886371654 NA Intergenic Intergenic -48908 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_64_43_0.27870847499845_5.59878585613652_0.527635886371654 chr12 87266490 87267036 + 0.527635886371654 NA promoter-TSS (NM_001142580) promoter-TSS (NM_001142580) 35 NM_146036 217737 Mm.22626 NM_146036 ENSMUSG00000021037 Ahsa1 BC023857|p38 AHA1, activator of heat shock protein ATPase 1 protein-coding common_peak1_64_43_0.27870847499845_5.59878585613652_0.527635886371654-2 chr17 88630171 88630650 + 0.527635886371654 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 3855 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_63_43_0.25649846643401_5.5876808518543_0.527635886371654-5 chr3 94443189 94443836 + 0.527635886371654 NA intron (NM_030116, intron 1 of 6) CpG 176 NM_030116 78523 Mm.218515 NM_030116 ENSMUSG00000028140 Mrpl9 8030480E20Rik|AA409733|C330013D18Rik|L9mt mitochondrial ribosomal protein L9 protein-coding common_peak1_64_43_0.27870847499845_5.59878585613652_0.527635886371654-3 chr2 75703988 75704420 + 0.527635886371654 NA intron (NR_132727, intron 1 of 1) CpG 459 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak2_63_43_0.25649846643401_5.5876808518543_0.527635886371654-2 chr6 131387371 131388388 + 0.527635886371654 NA intron (NM_011733, intron 1 of 8) intron (NM_011733, intron 1 of 8) 571 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding common_peak1_63_43_0.25649846643401_5.5876808518543_0.527635886371654-6 chr3 133091939 133092468 + 0.527635886371654 NA promoter-TSS (NM_026231) promoter-TSS (NM_026231) -164 NM_001356309 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_123_87_0.20396294134224_6.56141308930842_0.52762724878729-2 chr2 32450864 32451888 + 0.52762724878729 NA promoter-TSS (NM_001164357) promoter-TSS (NM_001164357) 94 NM_001164357 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_105_101_-0.233710266274879_6.55557020883406_0.52762724878729 chr7 67966929 67968225 + 0.52762724878729 NA intron (NM_010513, intron 1 of 20) B1_Mm|SINE|Alu 15320 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_105_101_-0.233710266274879_6.55557020883406_0.52762724878729-2 chr3 30968488 30969374 + 0.52762724878729 NA intron (NM_001165954, intron 1 of 14) CpG 484 NM_001165954 241915 Mm.233173 NM_153421 ENSMUSG00000037652 Phc3 E030046K01Rik|Edr3|Hph3 polyhomeotic 3 protein-coding common_peak1_122_87_0.192363551190596_6.5556133942326_0.52762724878729 chr4 129671987 129672787 + 0.52762724878729 NA intron (NM_008468, intron 1 of 13) CpG 380 NM_008468 16650 Mm.202358 NM_008468 ENSMUSG00000003731 Kpna6 IPOA7|Kpna5|NPI-2 karyopherin (importin) alpha 6 protein-coding common_peak1_105_101_-0.233710266274879_6.55557020883406_0.52762724878729 chr13 49420582 49421972 + 0.52762724878729 NA promoter-TSS (NM_199056) promoter-TSS (NM_199056) 54 NM_199056 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak2_123_87_0.20396294134224_6.56141308930842_0.52762724878729 chr1 150098320 150099845 + 0.52762724878729 NA promoter-TSS (NM_011198) promoter-TSS (NM_011198) 792 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA common_peak1_123_87_0.20396294134224_6.56141308930842_0.52762724878729 chrX 151803314 151804635 + 0.52762724878729 NA intron (NM_021523, intron 1 of 82) intron (NM_021523, intron 1 of 82) 692 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak1_159_115_0.17055100912437_6.94325649968976_0.527163953142608 chr11 117986698 117988213 + 0.527163953142608 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 598 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak1_160_115_0.179476376669568_6.94771918346236_0.527163953142608 chr7 28960239 28962239 + 0.527163953142608 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 1093 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_200_183_-0.168228315762414_7.43944779817581_0.527051239123261 chr8 23255747 23257517 + 0.527051239123261 NA intron (NM_020585, intron 1 of 4) intron (NM_020585, intron 1 of 4) 448 NM_020585 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding common_peak1_179_165_-0.177781243066829_7.28614880981351_0.526654312348249 chr8 79209031 79210340 + 0.526654312348249 NA TTS (NM_026315) TTS (NM_026315) 38898 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding common_peak1_90_88_-0.255591186510399_6.3479378377112_0.526409674640124 chr4 126261068 126262027 + 0.526409674640124 NA promoter-TSS (NM_013718) promoter-TSS (NM_013718) -858 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak1_107_75_0.21756435788333_6.35670969238525_0.526409674640124 chr18 34932219 34933240 + 0.526409674640124 NA promoter-TSS (NM_144866) promoter-TSS (NM_144866) -726 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak1_106_75_0.204238523585573_6.35004677523637_0.526409674640124 chr11 35975979 35977380 + 0.526409674640124 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 3410 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_91_88_-0.239935108743387_6.3557658765947_0.526409674640124 chr15 27996679 27997635 + 0.526409674640124 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 28691 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_90_88_-0.255591186510399_6.3479378377112_0.526409674640124 chr8 95331953 95332789 + 0.526409674640124 NA promoter-TSS (NM_024467) promoter-TSS (NM_024467) 87 NM_133954 101985 Mm.29069 NM_133954 ENSMUSG00000031792 Usb1 AA960436 U6 snRNA biogenesis 1 protein-coding common_peak2_106_75_0.204238523585573_6.35004677523637_0.526409674640124 chr1 118321896 118323067 + 0.526409674640124 NA intron (NM_026472, intron 1 of 6) intron (NM_026472, intron 1 of 6) 638 NM_026472 67949 Mm.280311 NM_026472 ENSMUSG00000026377 Nifk AI852665|C130020J04Rik|Mki67ip nucleolar protein interacting with the FHA domain of MKI67 protein-coding common_peak1_141_101_0.185140420161993_6.76499555205249_0.526362311986403 chr4 40702418 40704514 + 0.526362311986403 NA promoter-TSS (NM_025545) promoter-TSS (NM_025545) -272 NM_001025445 66408 Mm.430710 NM_025545 ENSMUSG00000028411 Aptx 2410016G21Rik|AA388047|FHA-HIT aprataxin protein-coding common_peak2_141_101_0.185140420161993_6.76499555205249_0.526362311986403-2 chr9 59485463 59486637 + 0.526362311986403 NA exon (NM_019927, exon 1 of 14) exon (NM_019927, exon 1 of 14) 324 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak2_141_101_0.185140420161993_6.76499555205249_0.526362311986403 chr11 115603801 115604880 + 0.526362311986403 NA promoter-TSS (NM_001252067) promoter-TSS (NM_001252067) 200 NM_025305 50529 Mm.193040 NM_025305 ENSMUSG00000046756 Mrps7 MRP-S7|Rpms7|S7mt mitchondrial ribosomal protein S7 protein-coding common_peak2_123_116_-0.206970159603867_6.76687963978147_0.526362311986378 chr15 85574885 85575778 + 0.526362311986378 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 2739 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_160_148_-0.181711148665022_7.12831294612965_0.526099681939836 chr8 31373596 31375344 + 0.526099681939836 NA intron (NR_046272, intron 1 of 3) intron (NR_046272, intron 1 of 3) 6721 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_181_131_0.168693145524301_7.1287406921206_0.526099681939836 chr11 60536659 60538423 + 0.526099681939836 NA promoter-TSS (NM_172943) promoter-TSS (NM_172943) -142 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak1_159_148_-0.190636516210219_7.12385026235705_0.526099681939836 chr15 58415512 58416699 + 0.526099681939836 NA intron (NM_145959, intron 1 of 23) intron (NM_145959, intron 1 of 23) 637 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding common_peak2_327_290_-0.128025734454333_8.12086247568112_0.526058199774656 chr11 8443323 8446617 + 0.526058199774656 NA exon (NM_001083587, exon 26 of 31) exon (NM_001083587, exon 26 of 31) 219565 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_63_64_-0.306437727957147_5.86914894904988_0.525933087859455 chr1 36691569 36692406 + 0.525933087859455 NA intron (NM_009942, intron 1 of 3) intron (NM_009942, intron 1 of 3) 500 NM_009942 12859 Mm.180182 NM_009942 ENSMUSG00000061518 Cox5b - cytochrome c oxidase subunit Vb protein-coding common_peak2_64_64_-0.284227719392707_5.8802539533321_0.525933087859455 chr11 113649560 113650196 + 0.525933087859455 NA intron (NM_013581, intron 1 of 13) CpG 349 NM_013581 16834 Mm.261620 NM_013581 ENSMUSG00000018661 Cog1 6030445I15|Ldlb|mKIAA1381 component of oligomeric golgi complex 1 protein-coding common_peak1_64_64_-0.284227719392707_5.8802539533321_0.525933087859455-2 chr3 144198164 144199003 + 0.525933087859455 NA intron (NM_001161769, intron 2 of 4) CpG 3749 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_64_64_-0.284227719392707_5.8802539533321_0.525933087859455-2 chr12 13248573 13249567 + 0.525933087859455 NA intron (NM_134040, intron 1 of 25) CpG 104 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_77_53_0.244431294945856_5.8771031496364_0.525933087859455 chr11 4302435 4303053 + 0.525933087859455 NA Intergenic Intergenic 35948 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_63_64_-0.306437727957147_5.86914894904988_0.525933087859455-2 chr2 92433193 92433939 + 0.525933087859455 NA intron (NM_009963, intron 1 of 11) intron (NM_009963, intron 1 of 11) 503 NM_009963 12953 Mm.254181 NM_009963 ENSMUSG00000068742 Cry2 AV006279|D130054K12Rik cryptochrome 2 (photolyase-like) protein-coding common_peak2_63_64_-0.306437727957147_5.86914894904988_0.525933087859455-3 chr5 110447777 110448511 + 0.525933087859455 NA exon (NM_001142642, exon 1 of 19) exon (NM_001142642, exon 1 of 19) 359 NM_001317042 381668 Mm.348782 NM_028596 ENSMUSG00000043323 Fbrsl1 2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545 fibrosin-like 1 protein-coding common_peak1_64_64_-0.284227719392707_5.8802539533321_0.525933087859455 chr11 116842758 116843229 + 0.525933087859455 NA promoter-TSS (NM_028865) promoter-TSS (NM_028865) 456 NM_033398 107817 Mm.481684 NM_033398 ENSMUSG00000056962 Jmjd6 5730436I23Rik|D11Ertd195e|PSR|PtdSerR|Ptdsr|mKIAA0585 jumonji domain containing 6 protein-coding common_peak1_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-2 chr11 106272417 106272872 + 0.525808162491377 NA exon (NM_001130187, exon 1 of 13) exon (NM_001130187, exon 1 of 13) 328 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak1_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-3 chr15 77036205 77036541 + 0.525808162491377 NA intron (NM_013593, intron 1 of 3) intron (NM_013593, intron 1 of 3) -8702 NM_001163621 71939 Mm.34173 NM_028010 ENSMUSG00000033576 Apol6 2310076O14Rik apolipoprotein L 6 protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377 chr1 4807635 4808219 + 0.525808162491377 NA exon (NM_008866, exon 1 of 9) exon (NM_008866, exon 1 of 9) 104 NM_008866 18777 Mm.299955 NM_008866 ENSMUSG00000025903 Lypla1 APT-1|Gm39587|LPL-I|Pla1a lysophospholipase 1 protein-coding common_peak1_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-4 chr17 67989554 67990073 + 0.525808162491377 NA intron (NM_172964, intron 1 of 17) intron (NM_172964, intron 1 of 17) 14295 NM_172964 268970 Mm.9935 NM_172964 ENSMUSG00000024043 Arhgap28 AU044757|AW550892|E130310N06 Rho GTPase activating protein 28 protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-2 chr11 16760379 16760907 + 0.525808162491377 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 8440 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-7 chr5 23787750 23788333 + 0.525808162491377 NA intron (NM_001310467, intron 1 of 13) intron (NM_001310467, intron 1 of 13) 330 NM_001310467 72772 Mm.133300 NM_177323 ENSMUSG00000028999 Rint1 1500019C06Rik|2810450M21Rik|Rint-1 RAD50 interactor 1 protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-5 chr3 97966421 97966820 + 0.525808162491377 NA exon (NM_001033779, exon 2 of 2) exon (NM_001033779, exon 2 of 2) 36447 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-3 chr17 67989428 67989945 + 0.525808162491377 NA intron (NM_172964, intron 1 of 17) intron (NM_172964, intron 1 of 17) 14422 NM_172964 268970 Mm.9935 NM_172964 ENSMUSG00000024043 Arhgap28 AU044757|AW550892|E130310N06 Rho GTPase activating protein 28 protein-coding common_peak1_32_35_-0.402859017044554_4.96849549292004_0.525808162491377 chr10 111654795 111655323 + 0.525808162491377 NA Intergenic Intergenic -60786 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377 chrX 74254915 74255431 + 0.525808162491377 NA intron (NM_007927, intron 1 of 5) CpG 486 NM_007927 13726 Mm.18892 NM_007927 ENSMUSG00000001964 Emd AW550900|Sta emerin protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-6 chr4 147132111 147132345 + 0.525808162491377 NA Intergenic Intergenic -43638 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding common_peak2_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-4 chr19 9071382 9071797 + 0.525808162491377 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 16367 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_32_35_-0.402859017044554_4.96849549292004_0.525808162491377-5 chr7 126861191 126861741 + 0.525808162491377 NA promoter-TSS (NM_172746) promoter-TSS (NM_172746) -3 NM_153580 233875 Mm.486253 NM_153580 ENSMUSG00000030689 Ino80e AI225782|AI854876|Ccdc85|Ccdc95 INO80 complex subunit E protein-coding common_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371-4 chr7 66581061 66581542 + 0.525808162491371 NA Intergenic MIRb|SINE|MIR 108260 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371-3 chr15 59781814 59782363 + 0.525808162491371 NA Intergenic Intergenic 12871 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371-5 chr7 127207779 127208221 + 0.525808162491371 NA promoter-TSS (NM_001347655) promoter-TSS (NM_001347655) 468 NM_144522 68449 Mm.41420 NM_144522 ENSMUSG00000042492 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-9 chr9 62627394 62627916 + 0.525808162491371 NA Intergenic Intergenic -50200 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-6 chr7 96563276 96564000 + 0.525808162491371 NA intron (NM_011858, intron 5 of 32) intron (NM_011858, intron 5 of 32) -221674 NR_046043 670727 Mm.421352 NR_046043 ENSMUSG00000085751 Gm15412 - predicted gene 15412 ncRNA common_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371 chr12 112587959 112588489 + 0.525808162491371 NA promoter-TSS (NM_198411) promoter-TSS (NM_198411) -560 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-7 chr8 60755864 60756132 + 0.525808162491371 NA Intergenic Intergenic 100441 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371-2 chr13 106936427 106936937 + 0.525808162491371 NA intron (NM_001360897, intron 1 of 30) CpG 276 NM_001360897 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-7 chr8 61624435 61624826 + 0.525808162491371 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -33461 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371 chr19 5429391 5429912 + 0.525808162491371 NA Intergenic Intergenic 4507 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding unique_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371 chr13 49190368 49190940 + 0.525808162491371 NA intron (NM_013610, intron 1 of 3) intron (NM_013610, intron 1 of 3) 3107 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-4 chr17 72968205 72968685 + 0.525808162491371 NA Intergenic Intergenic 50140 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-2 chr11 48994018 48994536 + 0.525808162491371 NA Intergenic Intergenic -2031 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding unique_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-2 chr17 49851557 49852153 + 0.525808162491371 NA intron (NM_177052, intron 15 of 22) intron (NM_177052, intron 15 of 22) 236683 NM_177052 319991 Mm.441340 NM_177052 ENSMUSG00000023999 Kif6 D130004B10Rik|D130084M03Rik kinesin family member 6 protein-coding common_peak2_42_27_0.338887608151828_4.97679872613352_0.525808162491371-2 chr4 155839872 155840328 + 0.525808162491371 NA intron (NM_024263, intron 1 of 9) intron (NM_024263, intron 1 of 9) 420 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-5 chr7 16417395 16417997 + 0.525808162491371 NA intron (NM_198631, intron 3 of 13) intron (NM_198631, intron 3 of 13) 16500 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-6 chr4 148524863 148525213 + 0.525808162491371 NA intron (NM_020009, intron 32 of 57) intron (NM_020009, intron 32 of 57) -24576 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_42_27_0.338887608151828_4.97679872613352_0.525808162491371-2 chr4 139147030 139147927 + 0.525808162491371 NA Intergenic B1_Mus2|SINE|Alu -16365 NM_001163006 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371 chr10 80102830 80103276 + 0.525808162491371 NA promoter-TSS (NM_183426) promoter-TSS (NM_183426) -351 NM_001359637 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_42_27_0.338887608151828_4.97679872613352_0.525808162491371 chr11 96292659 96293391 + 0.525808162491371 NA intron (NR_131758, intron 2 of 2) intron (NR_131758, intron 2 of 2) -6049 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-2 chr11 32551666 32552161 + 0.525808162491371 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 18647 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-4 chr9 47590045 47590773 + 0.525808162491371 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 60057 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-3 chr17 15564493 15564806 + 0.525808162491371 NA Intergenic Intergenic -1326 NM_144809 213389 Mm.215162 NM_144809 ENSMUSG00000051977 Prdm9 BC012016|Dsbc1|G1-419-29|Meisetz|PRDM9-B|Rcr1|repro7 PR domain containing 9 protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-3 chr11 117115331 117115720 + 0.525808162491371 NA intron (NM_001166507, intron 1 of 16) CpG 353 NM_001166506 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding unique_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371-3 chr7 101108628 101109294 + 0.525808162491371 NA 5' UTR (NM_001146010, exon 1 of 20) 5' UTR (NM_001146010, exon 1 of 20) 186 NM_199012 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-8 chr8 123634057 123634381 + 0.525808162491371 NA Intergenic Intergenic -19710 NM_133955 69581 Mm.168257 NM_133955 ENSMUSG00000039960 Rhou 2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K ras homolog family member U protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-4 chr3 84442465 84442802 + 0.525808162491371 NA 3' UTR (NM_001205355, exon 12 of 12) 3' UTR (NM_001205355, exon 12 of 12) 36858 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding common_peak1_41_27_0.305179773961776_4.95994480903849_0.525808162491371 chr1 51478647 51479069 + 0.525808162491371 NA promoter-TSS (NM_001310549) promoter-TSS (NM_001310549) -459 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_41_27_0.305179773961776_4.95994480903849_0.525808162491371-5 chr4 139622873 139623204 + 0.525808162491371 NA 5' UTR (NM_175438, exon 1 of 15) 5' UTR (NM_175438, exon 1 of 15) 144 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak1_124_88_0.199167350366546_6.57531710614967_0.525237659713344 chr7 28951753 28952659 + 0.525237659713344 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 10126 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_181_166_-0.170617027591297_7.2983957786784_0.525215632267454 chr19 4192176 4193330 + 0.525215632267454 NA exon (NM_031868, exon 2 of 7) exon (NM_031868, exon 2 of 7) 579 NM_031868 19045 Mm.1970 NM_031868 ENSMUSG00000040385 Ppp1ca Ppp1c|dism2 protein phosphatase 1, catalytic subunit, alpha isoform protein-coding common_peak1_250_184_0.142182979004883_7.60247295001875_0.524992371374274 chr7 127875046 127877496 + 0.524992371374274 NA promoter-TSS (NM_001362191) promoter-TSS (NM_001362191) 565 NM_146259 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding common_peak1_387_341_-0.120351919621308_8.35767655507524_0.524856200968547 chr8 70475271 70477733 + 0.524856200968547 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 441 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_92_64_0.228917328751782_6.13682647740435_0.524655741976941-2 chrX 96106399 96107483 + 0.524655741976941 NA intron (NM_010833, intron 1 of 12) PB1D9|SINE|Alu 10896 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_92_64_0.228917328751782_6.13682647740435_0.524655741976941 chr7 100943472 100944575 + 0.524655741976941 NA intron (NM_183168, intron 1 of 2) (CCTG)n|Simple_repeat|Simple_repeat -11862 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_92_64_0.228917328751782_6.13682647740435_0.524655741976941-4 chr3 146813060 146813583 + 0.524655741976941 NA promoter-TSS (NM_011100) promoter-TSS (NM_011100) -375 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_92_64_0.228917328751782_6.13682647740435_0.524655741976941-3 chr19 56459179 56460552 + 0.524655741976941 NA Intergenic Intergenic -1772 NM_001164263 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding common_peak2_77_76_-0.267467743585577_6.13305266890211_0.524655741976941 chr13 45880013 45881157 + 0.524655741976941 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 84406 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_92_64_0.228917328751782_6.13682647740435_0.524655741976941-2 chr12 116281308 116282277 + 0.524655741976941 NA intron (NM_028731, intron 1 of 21) CpG 570 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak1_92_64_0.228917328751782_6.13682647740435_0.524655741976941 chr1 157080722 157081973 + 0.524655741976941 NA Intergenic Intergenic 27303 NM_001305059 73435 Mm.116705 NM_028540 ENSMUSG00000026592 Tex35 1700057K13Rik testis expressed 35 protein-coding common_peak2_77_76_-0.267467743585577_6.13305266890211_0.524655741976941-2 chr16 4879492 4880471 + 0.524655741976941 NA promoter-TSS (NM_145359) promoter-TSS (NM_145359) -130 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak2_142_102_0.181118026077915_6.77705954022218_0.524301240106372 chr15 13366871 13367681 + 0.524301240106372 NA Intergenic Intergenic -193601 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_124_117_-0.207742268028898_6.77877191534739_0.524301240106348 chr3 88949959 88951374 + 0.524301240106348 NA promoter-TSS (NM_022994) promoter-TSS (NM_022994) -384 NM_001164533 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding common_peak1_124_117_-0.207742268028898_6.77877191534739_0.524301240106348-2 chr7 120634608 120636068 + 0.524301240106348 NA intron (NM_025899, intron 1 of 13) CpG 149 NM_025899 67003 Mm.334206 NM_025899 ENSMUSG00000030884 Uqcrc2 1500004O06Rik ubiquinol cytochrome c reductase core protein 2 protein-coding common_peak1_41_44_-0.379318400310295_5.30219389617453_0.524158758825513-2 chr13 85189537 85189958 + 0.524158758825513 NA intron (NM_023243, intron 1 of 8) intron (NM_023243, intron 1 of 8) 362 NM_023243 66671 Mm.18474 NM_023243 ENSMUSG00000021548 Ccnh 6330408H09Rik|AI661354|AV102684|AW538719 cyclin H protein-coding common_peak2_42_44_-0.345610566120243_5.31904781326955_0.524158758825513-2 chr15 98539995 98540933 + 0.524158758825513 NA Intergenic Intergenic -6195 NR_153345 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak1_41_44_-0.379318400310295_5.30219389617453_0.524158758825513 chr11 117940425 117941009 + 0.524158758825513 NA Intergenic Intergenic 28649 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_42_44_-0.345610566120243_5.31904781326955_0.524158758825513 chr17 46646230 46646546 + 0.524158758825513 NA promoter-TSS (NM_029091) promoter-TSS (NM_029091) 159 NM_025302 27398 Mm.391007 NM_025302 ENSMUSG00000002767 Mrpl2 CGI-22|L2mt|MRP-L14|MRP-L2|Rpml14 mitochondrial ribosomal protein L2 protein-coding common_peak2_41_44_-0.379318400310295_5.30219389617453_0.524158758825513 chr1 155039710 155040208 + 0.524158758825513 NA Intergenic Intergenic 43305 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_42_44_-0.345610566120243_5.31904781326955_0.524158758825513-5 chr6 81923586 81924179 + 0.524158758825513 NA exon (NM_177884, exon 1 of 17) exon (NM_177884, exon 1 of 17) 213 NM_177884 330361 Mm.474487 NM_177884 ENSMUSG00000035125 Gcfc2 A130099G21|AW146020|GCF2|Tcf9 GC-rich sequence DNA binding factor 2 protein-coding common_peak2_42_44_-0.345610566120243_5.31904781326955_0.524158758825513-4 chr2 84743190 84743729 + 0.524158758825513 NA Intergenic CpG -2281 NR_029544 387149 NR_029544 ENSMUSG00000065484 Mir130a Mirn130|Mirn130a|mir-130a microRNA 130a ncRNA common_peak2_41_44_-0.379318400310295_5.30219389617453_0.524158758825513-3 chr6 116192924 116193362 + 0.524158758825513 NA intron (NM_177412, intron 1 of 5) CpG 231 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding unique_peak2_41_44_-0.379318400310295_5.30219389617453_0.524158758825513 chr6 3498485 3498980 + 0.524158758825513 NA intron (NM_001167751, intron 1 of 26) intron (NM_001167751, intron 1 of 26) 339 NM_001167750 73288 Mm.45539 NM_024260 ENSMUSG00000001376 Vps50 1700034M03Rik|8430415E05Rik|BLM|C87205|Ccdc132|mKIAA1861 VPS50 EARP/GARPII complex subunit protein-coding common_peak1_41_44_-0.379318400310295_5.30219389617453_0.524158758825513-3 chr17 87458758 87459463 + 0.524158758825513 NA Intergenic Intergenic -12175 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding common_peak1_41_44_-0.379318400310295_5.30219389617453_0.524158758825513-5 chrX 12857915 12858472 + 0.524158758825513 NA Intergenic Intergenic -78680 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding common_peak2_42_44_-0.345610566120243_5.31904781326955_0.524158758825513 chr15 31342564 31343185 + 0.524158758825513 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 24885 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak2_42_44_-0.345610566120243_5.31904781326955_0.524158758825513-3 chr17 74527500 74528012 + 0.524158758825513 NA promoter-TSS (NM_007566) promoter-TSS (NM_007566) -539 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak2_41_44_-0.379318400310295_5.30219389617453_0.524158758825513-2 chr1 184140991 184141834 + 0.524158758825513 NA Intergenic Intergenic 107031 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_41_44_-0.379318400310295_5.30219389617453_0.524158758825513-4 chr18 38296664 38296965 + 0.524158758825513 NA promoter-TSS (NM_001164621) promoter-TSS (NM_001164621) 9 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding common_peak2_53_35_0.302621849457847_5.32123592617124_0.524158758825507-5 chr7 139296030 139296506 + 0.524158758825507 NA Intergenic Intergenic 47786 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-6 chr4 43557771 43558316 + 0.524158758825507 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 4540 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak2_53_35_0.302621849457847_5.32123592617124_0.524158758825507-6 chr8 94299352 94299917 + 0.524158758825507 NA intron (NM_001357268, intron 6 of 20) intron (NM_001357268, intron 6 of 20) -24677 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-8 chr7 28013713 28014416 + 0.524158758825507 NA promoter-TSS (NM_001254951) promoter-TSS (NM_001254951) 51 NM_001254951 100043772 Mm.129275 NM_001100456 ENSMUSG00000096916 Zfp850 C130069I09Rik|Gm4636 zinc finger protein 850 protein-coding common_peak2_52_35_0.275845053827548_5.30784752835609_0.524158758825507 chr15 103377986 103378358 + 0.524158758825507 NA Intergenic Intergenic -11381 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-4 chr17 24141017 24141501 + 0.524158758825507 NA intron (NM_001286662, intron 1 of 13) CpG 335 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak2_53_35_0.302621849457847_5.32123592617124_0.524158758825507-4 chr7 25076361 25076888 + 0.524158758825507 NA promoter-TSS (NM_175477) promoter-TSS (NM_175477) -183 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding unique_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507 chrX 7898790 7899851 + 0.524158758825507 NA promoter-TSS (NM_001313693) promoter-TSS (NM_001313693) -16 NM_011591 21855 Mm.27393 NM_011591 ENSMUSG00000031158 Timm17b 17kDa|Sfc3|mTim17b translocase of inner mitochondrial membrane 17b protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-7 chr6 72215608 72216423 + 0.524158758825507 NA intron (NM_153778, intron 2 of 2) intron (NM_153778, intron 2 of 2) 19562 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding common_peak2_53_35_0.302621849457847_5.32123592617124_0.524158758825507-2 chr18 24205397 24206014 + 0.524158758825507 NA promoter-TSS (NM_001160404) promoter-TSS (NM_001160404) -254 NM_001361200 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - polypeptide N-acetylgalactosaminyltransferase 1 protein-coding common_peak2_52_35_0.275845053827548_5.30784752835609_0.524158758825507-2 chr16 64852080 64852423 + 0.524158758825507 NA promoter-TSS (NM_001347245) promoter-TSS (NM_001347245) 250 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-5 chr3 105059555 105060328 + 0.524158758825507 NA Intergenic Intergenic -6795 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_53_35_0.302621849457847_5.32123592617124_0.524158758825507-3 chr8 45719364 45719981 + 0.524158758825507 NA intron (NM_001310708, intron 1 of 19) intron (NM_001310708, intron 1 of 19) 57679 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak1_53_35_0.302621849457847_5.32123592617124_0.524158758825507 chr11 116107366 116107954 + 0.524158758825507 NA intron (NM_001205081, intron 3 of 5) intron (NM_001205081, intron 3 of 5) 2575 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak2_53_35_0.302621849457847_5.32123592617124_0.524158758825507 chr12 80217849 80218683 + 0.524158758825507 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 42105 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_53_35_0.302621849457847_5.32123592617124_0.524158758825507-2 chr16 18425945 18426519 + 0.524158758825507 NA promoter-TSS (NM_013711) promoter-TSS (NM_013711) -185 NM_001353143 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding common_peak2_53_35_0.302621849457847_5.32123592617124_0.524158758825507-3 chr4 118179236 118179971 + 0.524158758825507 NA intron (NM_001161823, intron 1 of 21) intron (NM_001161823, intron 1 of 21) 440 NM_172382 230674 Mm.234234 NM_172382 ENSMUSG00000033326 Kdm4a D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677 lysine (K)-specific demethylase 4A protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-3 chr15 96709934 96710471 + 0.524158758825507 NA Intergenic CpG -10474 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak2_52_35_0.275845053827548_5.30784752835609_0.524158758825507-3 chr2 166906065 166906969 + 0.524158758825507 NA intron (NM_023565, intron 1 of 24) CpG 421 NM_023565 110750 Mm.22417 NM_023565 ENSMUSG00000002718 Cse1l 2610100P18Rik|AA407533|Capts|Cas|Xpo2 chromosome segregation 1-like (S. cerevisiae) protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-9 chr7 110773208 110773755 + 0.524158758825507 NA intron (NM_009667, intron 1 of 14) intron (NM_009667, intron 1 of 14) 877 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507 chr10 63242909 63243627 + 0.524158758825507 NA promoter-TSS (NM_026101) promoter-TSS (NM_026101) -529 NM_030114 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak1_52_35_0.275845053827548_5.30784752835609_0.524158758825507-2 chr10 86289423 86290089 + 0.524158758825507 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -10656 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_182_167_-0.171380730821674_7.30662705736792_0.523795193141657 chr7 67951922 67953975 + 0.523795193141657 NA exon (NM_010513, exon 1 of 21) exon (NM_010513, exon 1 of 21) 691 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_92_89_-0.240567954549438_6.37156911905496_0.523672089663765 chr2 91054025 91055007 + 0.523672089663765 NA intron (NM_008948, intron 1 of 11) intron (NM_008948, intron 1 of 11) 500 NM_008948 19182 Mm.289832 NM_008948 ENSMUSG00000002102 Psmc3 TBP-1 proteasome (prosome, macropain) 26S subunit, ATPase 3 protein-coding common_peak2_108_76_0.211908344433545_6.37274071291167_0.52367208966374-2 chr17 35869710 35870638 + 0.52367208966374 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 3559 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak2_108_76_0.211908344433545_6.37274071291167_0.52367208966374 chr1 161875468 161876587 + 0.52367208966374 NA intron (NR_151684, intron 1 of 24) intron (NR_151684, intron 1 of 24) 655 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding common_peak1_108_76_0.211908344433545_6.37274071291167_0.52367208966374 chr8 104394543 104395738 + 0.52367208966374 NA intron (NM_153582, intron 1 of 3) CpG 667 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak1_162_117_0.172499940362583_6.96889301954313_0.523540816573272 chr8 107254019 107255773 + 0.523540816573272 NA Intergenic Intergenic -1268 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak1_142_133_-0.198470637196639_6.96685387185945_0.523540816573272 chr19 32711604 32712643 + 0.523540816573272 NA intron (NM_026487, intron 1 of 9) CpG 175 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding common_peak1_332_247_0.124325675978987_8.01635914837637_0.523290752438077 chr5 125079635 125082680 + 0.523290752438077 NA exon (NM_001253904, exon 13 of 48) exon (NM_001253904, exon 13 of 48) 77682 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_52_54_-0.3355896582548_5.61356488439726_0.522994948702178-3 chr7 126565923 126566459 + 0.522994948702178 NA 5' UTR (NM_146200, exon 2 of 21) 5' UTR (NM_146200, exon 2 of 21) 175 NM_146200 56347 Mm.22776 NM_146200 ENSMUSG00000030738 Eif3c 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl eukaryotic translation initiation factor 3, subunit C protein-coding common_peak1_65_44_0.26815790849484_5.6259320505771_0.522994948702178-5 chr5 137045339 137046017 + 0.522994948702178 NA intron (NM_007457, intron 1 of 4) intron (NM_007457, intron 1 of 4) 430 NM_007457 11769 Mm.833 NM_007457 ENSMUSG00000004849 Ap1s1 AP19 adaptor protein complex AP-1, sigma 1 protein-coding common_peak2_65_44_0.26815790849484_5.6259320505771_0.522994948702178 chr16 91485283 91485765 + 0.522994948702178 NA intron (NM_010508, intron 1 of 10) CpG 309 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak2_65_44_0.26815790849484_5.6259320505771_0.522994948702178-3 chr3 37313713 37314163 + 0.522994948702178 NA intron (NM_001255992, intron 1 of 1) intron (NM_001255992, intron 1 of 1) 1384 NM_001008502 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding common_peak2_53_54_-0.3088128626245_5.62695328221241_0.522994948702178-2 chr2 73910791 73911467 + 0.522994948702178 NA intron (NM_001301722, intron 1 of 4) CpG-8181 197 NM_175015 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding common_peak1_65_44_0.26815790849484_5.6259320505771_0.522994948702178-4 chr2 29692019 29692520 + 0.522994948702178 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -69259 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding common_peak1_65_44_0.26815790849484_5.6259320505771_0.522994948702178 chr13 98015685 98016163 + 0.522994948702178 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 190241 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_65_44_0.26815790849484_5.6259320505771_0.522994948702178-2 chr18 56707913 56708835 + 0.522994948702178 NA exon (NM_010721, exon 1 of 11) exon (NM_010721, exon 1 of 11) 561 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_52_54_-0.3355896582548_5.61356488439726_0.522994948702178 chr13 107021437 107022099 + 0.522994948702178 NA promoter-TSS (NR_015471) promoter-TSS (NR_015471) 346 NM_001145779 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding common_peak2_53_54_-0.3088128626245_5.62695328221241_0.522994948702178-3 chr3 84480194 84480923 + 0.522994948702178 NA promoter-TSS (NM_001033301) promoter-TSS (NM_001033301) -119 NM_001033301 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding common_peak2_65_44_0.26815790849484_5.6259320505771_0.522994948702178-5 chr5 91616569 91617277 + 0.522994948702178 NA intron (NM_145562, intron 3 of 3) intron (NM_145562, intron 3 of 3) 99223 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak2_53_54_-0.3088128626245_5.62695328221241_0.522994948702178 chr17 35703869 35704536 + 0.522994948702178 NA promoter-TSS (NM_172962) promoter-TSS (NM_172962) -63 NM_172962 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_52_54_-0.3355896582548_5.61356488439726_0.522994948702178-2 chr9 103008319 103008796 + 0.522994948702178 NA promoter-TSS (NM_033314) promoter-TSS (NM_033314) 68 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_52_54_-0.3355896582548_5.61356488439726_0.522994948702178 chr17 26068741 26069479 + 0.522994948702178 NA promoter-TSS (NM_001162868) promoter-TSS (NM_001162868) 67 NM_001162868 215445 Mm.41191 NM_153140 ENSMUSG00000037098 Rab11fip3 Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665 RAB11 family interacting protein 3 (class II) protein-coding common_peak2_65_44_0.26815790849484_5.6259320505771_0.522994948702178-4 chr4 136441035 136441684 + 0.522994948702178 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 16747 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_53_54_-0.3088128626245_5.62695328221241_0.522994948702178-4 chr5 3341055 3341734 + 0.522994948702178 NA Intergenic CpG -2499 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_52_54_-0.3355896582548_5.61356488439726_0.522994948702178-2 chr2 30808033 30808736 + 0.522994948702178 NA intron (NM_001356433, intron 1 of 3) intron (NM_001356433, intron 1 of 3) 201 NM_001356437 66617 Mm.33167 NM_170592 ENSMUSG00000026857 Ntmt1 2610205E22Rik|AL033331|AL033332|Mettl11a|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding common_peak2_65_44_0.26815790849484_5.6259320505771_0.522994948702178-6 chr8 119428731 119429065 + 0.522994948702178 NA Intergenic Intergenic -8264 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_53_54_-0.3088128626245_5.62695328221241_0.522994948702178-5 chr5 134313745 134314651 + 0.522994948702178 NA intron (NM_001359066, intron 1 of 32) CpG 562 NM_001359063 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak1_65_44_0.26815790849484_5.6259320505771_0.522994948702178-3 chr15 74676994 74677902 + 0.522994948702178 NA Intergenic Intergenic -4878 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak1_65_44_0.26815790849484_5.6259320505771_0.522994948702178-2 chr15 62325514 62326512 + 0.522994948702178 NA Intergenic Intergenic -106562 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_162_150_-0.183261749600654_7.14677386452475_0.522914622171082 chr11 86587245 86588525 + 0.522914622171082 NA intron (NM_001356531, intron 10 of 11) B1_Mur3|SINE|Alu -3727 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_183_133_0.162654152191994_7.14741626655377_0.522914622171082 chr6 72439044 72440682 + 0.522914622171082 NA promoter-TSS (NM_145569) promoter-TSS (NM_145569) -305 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak1_125_89_0.194462222343916_6.58908420750163_0.522897988096819-2 chr9 65032143 65033201 + 0.522897988096819 NA intron (NM_028906, intron 1 of 20) CpG 214 NM_028906 74388 Mm.202749 NM_028906 ENSMUSG00000032393 Dpp8 2310004I03Rik|4932434F09Rik|AI666706|DPP VIII dipeptidylpeptidase 8 protein-coding common_peak2_125_89_0.194462222343916_6.58908420750163_0.522897988096819 chr8 105594084 105594973 + 0.522897988096819 NA Intergenic Intergenic -10701 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak1_108_103_-0.221744833012646_6.58956730163477_0.522897988096819-2 chr7 98692325 98693497 + 0.522897988096819 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 10017 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak1_125_89_0.194462222343916_6.58908420750163_0.522897988096819 chr12 111712454 111713637 + 0.522897988096819 NA promoter-TSS (NM_026511) promoter-TSS (NM_026511) -92 NM_001324482 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak1_108_103_-0.221744833012646_6.58956730163477_0.522897988096819 chr15 10663756 10664399 + 0.522897988096819 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 49463 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_228_206_-0.151328629487131_7.61782264275576_0.52270504450355 chr19 8711809 8713825 + 0.52270504450355 NA exon (NM_008577, exon 2 of 9) exon (NM_008577, exon 2 of 9) 1080 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_392_294_0.111271786847396_8.2602070376729_0.522489494311137 chr11 86577614 86580985 + 0.522489494311137 NA Intergenic Intergenic 4859 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_125_118_-0.208502444634353_6.79056654099077_0.522277559749933-2 chr16 44138240 44139706 + 0.522277559749933 NA promoter-TSS (NM_028108) promoter-TSS (NM_028108) 286 NM_001358203 11964 Mm.217787 NM_007508 ENSMUSG00000052459 Atp6v1a AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2 ATPase, H+ transporting, lysosomal V1 subunit A protein-coding common_peak1_143_103_0.177161571385125_6.78902050383365_0.522277559749933 chr9 31029605 31031409 + 0.522277559749933 NA promoter-TSS (NM_172765) promoter-TSS (NM_172765) -137 NM_001115130 235132 Mm.239355 NM_172765 ENSMUSG00000047412 Zbtb44 6030404E16Rik|Btbd15|E230011F09 zinc finger and BTB domain containing 44 protein-coding common_peak2_125_118_-0.208502444634353_6.79056654099077_0.522277559749933 chr13 58214812 58215901 + 0.522277559749933 NA exon (NM_152234, exon 1 of 10) exon (NM_152234, exon 1 of 10) 297 NM_152234 56085 Mm.182053 NM_026842 ENSMUSG00000005312 Ubqln1 1110046H03Rik|1810030E05Rik|AU019746|C77538|D13Ertd372e|Da41|Dsk2|Plic-1|Plic1|Xdrp1 ubiquilin 1 protein-coding common_peak1_144_103_0.18707522241681_6.7939773293495_0.522277559749933 chr13 90922925 90923976 + 0.522277559749933 NA intron (NM_024175, intron 1 of 3) CpG 328 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak2_65_65_-0.284383114533939_5.90220256209148_0.522142286192486 chr13 52024195 52025222 + 0.522142286192486 NA Intergenic Intergenic -72033 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_78_54_0.236207952750616_5.89946368989997_0.522142286192486 chr11 96270161 96270790 + 0.522142286192486 NA promoter-TSS (NM_008270) promoter-TSS (NM_008270) -855 NM_008270 15417 Mm.258271 NM_008270 ENSMUSG00000020875 Hoxb9 Hox-2.5 homeobox B9 protein-coding common_peak2_65_65_-0.284383114533939_5.90220256209148_0.522142286192486-3 chr3 36475902 36477077 + 0.522142286192486 NA promoter-TSS (NR_105976) promoter-TSS (NR_105976) 552 NM_028183 72282 Mm.55317 NM_028183 ENSMUSG00000027713 1810062G17Rik - RIKEN cDNA 1810062G17 gene protein-coding common_peak2_78_54_0.236207952750616_5.89946368989997_0.522142286192486-2 chr3 95042054 95042588 + 0.522142286192486 NA intron (NM_001282017, intron 1 of 9) intron (NM_001282017, intron 1 of 9) 293 NM_001282017 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak2_65_65_-0.284383114533939_5.90220256209148_0.522142286192486-2 chr18 68299393 68300167 + 0.522142286192486 NA promoter-TSS (NM_026440) promoter-TSS (NM_026440) 553 NM_153794 108654 Mm.125857 NM_153794 ENSMUSG00000038121 Fam210a 4933403F05Rik|AA987140|AV134576|AW491926 family with sequence similarity 210, member A protein-coding common_peak1_65_65_-0.284383114533939_5.90220256209148_0.522142286192486 chr5 125268766 125269300 + 0.522142286192486 NA Intergenic Intergenic 72061 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding common_peak2_65_65_-0.284383114533939_5.90220256209148_0.522142286192486-4 chr5 100605595 100606659 + 0.522142286192486 NA Intergenic Intergenic -33922 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_78_54_0.236207952750616_5.89946368989997_0.522142286192486 chr11 45851942 45852829 + 0.522142286192486 NA intron (NM_001045520, intron 1 of 11) CpG 421 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding common_peak1_163_118_0.16908682471925_6.97936117566757_0.521772469045118 chrX 94122020 94123652 + 0.521772469045118 NA intron (NM_001358356, intron 1 of 8) CpG 571 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak2_78_77_-0.267834552586972_6.15148494256876_0.521498497621986 chrX 151520395 151521598 + 0.521498497621986 NA 5' UTR (NM_177201, exon 1 of 19) 5' UTR (NM_177201, exon 1 of 19) 324 NM_001113354 320595 Mm.17156 NM_177201 ENSMUSG00000041229 Phf8 9830141C09Rik|mKIAA1111 PHD finger protein 8 protein-coding common_peak1_78_77_-0.267834552586972_6.15148494256876_0.521498497621986-2 chr9 102776906 102777601 + 0.521498497621986 NA Intergenic Intergenic 37605 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_78_77_-0.267834552586972_6.15148494256876_0.521498497621986 chr6 148944135 148945160 + 0.521498497621986 NA promoter-TSS (NR_144294) promoter-TSS (NR_144294) 179 NM_001355645 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding common_peak2_93_65_0.222212204370357_6.15550022154363_0.521498497621986 chr3 123508600 123509340 + 0.521498497621986 NA promoter-TSS (NR_028574) promoter-TSS (NR_028574) -634 NR_028574 69895 Mm.260791 NR_028574 ENSMUSG00000104960 Snhg8 1110065M07Rik|2010109N14Rik small nucleolar RNA host gene 8 ncRNA common_peak1_184_134_0.159692083614001_7.15666163885783_0.521355679625955 chr11 115603454 115605018 + 0.521355679625955 NA promoter-TSS (NM_025305) promoter-TSS (NM_025305) 96 NM_025305 50529 Mm.193040 NM_025305 ENSMUSG00000046756 Mrps7 MRP-S7|Rpms7|S7mt mitchondrial ribosomal protein S7 protein-coding common_peak1_206_151_0.149542013234334_7.32269852006075_0.521007666747502 chr6 100704606 100706130 + 0.521007666747502 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 634 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak2_93_90_-0.241188316469886_6.38720048196375_0.52100027772274 chr5 124540848 124541776 + 0.52100027772274 NA intron (NM_019770, intron 1 of 3) CpG 521 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding common_peak1_93_90_-0.241188316469886_6.38720048196375_0.52100027772274-2 chr2 38643168 38643940 + 0.52100027772274 NA intron (NM_011187, intron 1 of 7) intron (NM_011187, intron 1 of 7) 352 NM_011187 19177 Mm.389251 NM_011187 ENSMUSG00000026750 Psmb7 AU020723|MC14 proteasome (prosome, macropain) subunit, beta type 7 protein-coding common_peak1_109_77_0.206375102915445_6.38858977031997_0.52100027772274 chr7 109751740 109752716 + 0.52100027772274 NA promoter-TSS (NM_020050) promoter-TSS (NM_020050) 35 NM_020050 56786 Mm.240668 NM_020050 ENSMUSG00000031021 Tmem9b 2310004K06Rik|AW539847|D7H11orf15|ICRFP703B1614Q5.3 TMEM9 domain family, member B protein-coding common_peak1_93_90_-0.241188316469886_6.38720048196375_0.52100027772274 chr19 44106658 44107418 + 0.52100027772274 NA intron (NM_001162410, intron 1 of 20) intron (NM_001162410, intron 1 of 20) 439 NM_007700 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK alpha|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak1_126_90_0.189844981375219_6.60271713088631_0.520606684624854 chr8 111258398 111259509 + 0.520606684624854 NA exon (NM_009149, exon 1 of 26) exon (NM_009149, exon 1 of 26) 249 NM_009149 20340 Mm.276271 NM_009149 ENSMUSG00000003316 Glg1 AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel golgi apparatus protein 1 protein-coding common_peak2_109_104_-0.222468195888428_6.60301141972191_0.52060668462483 chr19 8992573 8993785 + 0.52060668462483 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 3895 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_126_119_-0.209250974034603_6.80226510859122_0.520290261776281 chr4 141572254 141573563 + 0.520290261776281 NA Intergenic Intergenic 26746 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_165_119_0.174378045709155_6.9940796184631_0.520032025387926 chr3 61364612 61365734 + 0.520032025387926 NA exon (NM_028712, exon 1 of 1) exon (NM_028712, exon 1 of 1) 666 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_164_119_0.165722328396631_6.98975175980683_0.520032025387926 chr4 133752488 133753894 + 0.520032025387926 NA exon (NM_001080819, exon 1 of 20) exon (NM_001080819, exon 1 of 20) 420 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak2_145_135_-0.190102385257656_6.99241164862151_0.520032025387926 chr11 86649281 86650827 + 0.520032025387926 NA intron (NM_001356531, intron 5 of 11) B1F1|SINE|Alu 21221 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_145_135_-0.190102385257656_6.99241164862151_0.520032025387926 chr4 156189156 156191166 + 0.520032025387926 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 7327 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_164_119_0.165722328396631_6.98975175980683_0.520032025387926-2 chr9 110407094 110408181 + 0.520032025387926 NA intron (NM_001081043, intron 1 of 24) intron (NM_001081043, intron 1 of 24) 573 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak1_164_119_0.165722328396631_6.98975175980683_0.520032025387926 chr9 64736138 64738024 + 0.520032025387926 NA intron (NM_017382, intron 1 of 4) intron (NM_017382, intron 1 of 4) 675 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791 chr10 27249343 27249595 + 0.519648556297791 NA intron (NM_008481, intron 14 of 63) intron (NM_008481, intron 14 of 63) -140397 NR_131034 75855 Mm.402080 NR_131034 ENSMUSG00000101636 4930579H20Rik - RIKEN cDNA 4930579H20 gene ncRNA common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-14 chr8 70552295 70552617 + 0.519648556297791 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 12781 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding unique_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-2 chr16 8847149 8847445 + 0.519648556297791 NA intron (NM_001081400, intron 3 of 3) intron (NM_001081400, intron 3 of 3) 17197 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-15 chr18 36670485 36670723 + 0.519648556297791 NA promoter-TSS (NM_001164406) promoter-TSS (NM_001164406) -293 NM_025291 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-34 chr9 78230039 78230259 + 0.519648556297791 NA promoter-TSS (NM_008181) promoter-TSS (NM_008181) -520 NM_008181 14857 Mm.467426 NM_008181 ENSMUSG00000074183 Gsta1 Gst2-1 glutathione S-transferase, alpha 1 (Ya) protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-12 chr13 74563375 74563801 + 0.519648556297791 NA Intergenic Intergenic -69638 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-18 chrX 97376156 97376410 + 0.519648556297791 NA intron (NM_001161432, intron 1 of 7) intron (NM_001161432, intron 1 of 7) 926 NM_001161432 245527 Mm.189270 NM_175540 ENSMUSG00000034457 Eda2r 9430060M22Rik|TNFRSF27|Xedar ectodysplasin A2 receptor protein-coding common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-3 chr11 70195750 70195968 + 0.519648556297791 NA Intergenic Intergenic -18051 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-28 chr5 148374486 148374771 + 0.519648556297791 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 18187 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-28 chr6 86319292 86319504 + 0.519648556297791 NA Intergenic Intergenic -46285 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-3 chr12 29998518 29998755 + 0.519648556297791 NA intron (NM_181395, intron 14 of 22) (GA)n|Simple_repeat|Simple_repeat 60600 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-17 chr9 75410444 75410692 + 0.519648556297791 NA promoter-TSS (NM_015806) promoter-TSS (NM_015806) 384 NR_040719 71274 Mm.399152 NR_040719 ENSMUSG00000097021 4933433G15Rik 4921522K19Rik RIKEN cDNA 4933433G15 gene ncRNA unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-8 chr11 102958263 102958497 + 0.519648556297791 NA TTS (NR_037963) TTS (NR_037963) 5774 NR_037963 69739 Mm.276539 NR_037963 ENSMUSG00000085338 2410004I01Rik - RIKEN cDNA 2410004I01 gene ncRNA common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-2 chr10 93643298 93643510 + 0.519648556297791 NA intron (NM_021320, intron 1 of 9) intron (NM_021320, intron 1 of 9) 2355 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-17 chr17 26143262 26143566 + 0.519648556297791 NA exon (NM_009733, exon 2 of 11) exon (NM_009733, exon 2 of 11) 4728 NM_001159598 12005 Mm.23684 NM_009733 ENSMUSG00000024182 Axin1 AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly axin 1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-23 chr2 84677790 84677987 + 0.519648556297791 NA promoter-TSS (NM_025885) promoter-TSS (NM_025885) 286 NM_001290751 66958 Mm.371621 NM_025868 ENSMUSG00000050043 Tmx2 2310042M24Rik|AA589631|Txndc14 thioredoxin-related transmembrane protein 2 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-3 chr10 76902867 76903176 + 0.519648556297791 NA intron (NM_001347216, intron 1 of 15) intron (NM_001347216, intron 1 of 15) 58926 NM_001347216 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-10 chr13 5369975 5370329 + 0.519648556297791 NA Intergenic Intergenic 487940 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-7 chr17 40880027 40880227 + 0.519648556297791 NA exon (NM_027834, exon 1 of 2) exon (NM_027834, exon 1 of 2) 431 NM_027834 71583 Mm.158733 NM_027834 ENSMUSG00000054951 9130008F23Rik - RIKEN cDNA 9130008F23 gene protein-coding common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-4 chr13 110917760 110918039 + 0.519648556297791 NA Intergenic Intergenic -14053 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-29 chr7 30231475 30231734 + 0.519648556297791 NA promoter-TSS (NM_027259) promoter-TSS (NM_027259) -213 NM_001360648 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-30 chr7 30649409 30649680 + 0.519648556297791 NA intron (NM_133693, intron 2 of 9) intron (NM_133693, intron 2 of 9) 684 NM_133693 68035 Mm.401747 NM_133693 ENSMUSG00000036733 Rbm42 1700003D06Rik|3100004P22Rik RNA binding motif protein 42 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-8 chr18 11052780 11053004 + 0.519648556297791 NA promoter-TSS (NR_105023) promoter-TSS (NR_105023) -325 NR_105022 68434 Mm.57626 NR_105022 ENSMUSG00000097222 1010001N08Rik Gata6as RIKEN cDNA 1010001N08 gene ncRNA unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-8 chr12 108791640 108791973 + 0.519648556297791 NA Intergenic Intergenic -1505 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-5 chr11 60930425 60930674 + 0.519648556297791 NA intron (NR_027800, intron 1 of 1) intron (NR_027800, intron 1 of 1) 1318 NR_027800 24082 Mm.46270 NM_025293 ENSMUSG00000042549 Map2k3os F3-1|Gm16516|Gtlf3a mitogen-activated protein kinase kinase 3, opposite strand ncRNA unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-12 chr15 85859906 85860141 + 0.519648556297791 NA promoter-TSS (NM_013882) promoter-TSS (NM_013882) 77 NM_013882 29870 Mm.20858 NM_013882 ENSMUSG00000022385 Gtse1 B99|Gtse-1 G two S phase expressed protein 1 protein-coding common_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-4 chr4 43025563 43025759 + 0.519648556297791 NA 5' UTR (NM_020035, exon 1 of 10) 5' UTR (NM_020035, exon 1 of 10) 113 NM_020035 56703 Mm.143738 NM_020035 ENSMUSG00000028454 Pigo PIG-O phosphatidylinositol glycan anchor biosynthesis, class O protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-32 chr8 36683841 36684057 + 0.519648556297791 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 49105 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-4 chr10 80168268 80168471 + 0.519648556297791 NA intron (NR_152857, intron 1 of 7) intron (NR_152857, intron 1 of 7) 530 NR_152857 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-27 chr3 131139217 131139585 + 0.519648556297791 NA intron (NM_001276403, intron 3 of 11) intron (NM_001276403, intron 3 of 11) 26610 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding unique_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791 chr13 56093155 56093449 + 0.519648556297791 NA intron (NM_001159513, intron 5 of 8) intron (NM_001159513, intron 5 of 8) 42248 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-16 chr9 50554988 50555201 + 0.519648556297791 NA promoter-TSS (NM_133217) promoter-TSS (NM_133217) 44 NM_133217 170752 Mm.390149 NM_133217 ENSMUSG00000032066 Bco2 B-diox-II|Bcdo2|Bcmo2|CMO2 beta-carotene oxygenase 2 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-11 chr6 55444340 55444625 + 0.519648556297791 NA Intergenic Intergenic -7496 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-33 chr7 46639362 46639695 + 0.519648556297791 NA intron (NM_013789, intron 1 of 10) intron (NM_013789, intron 1 of 10) 279 NM_013789 27414 Mm.76659 NM_013789 ENSMUSG00000030839 Sergef DelGEF|Gef|Gnef|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-22 chr2 60633311 60633567 + 0.519648556297791 NA intron (NM_021359, intron 8 of 14) intron (NM_021359, intron 8 of 14) 40254 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-17 chr2 118372997 118373304 + 0.519648556297791 NA exon (NM_201367, exon 1 of 3) exon (NM_201367, exon 1 of 3) 269 NM_201367 381413 Mm.70979 NM_201367 ENSMUSG00000040133 Gpr176 Gm1012 G protein-coupled receptor 176 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-18 chr17 28341441 28341645 + 0.519648556297791 NA exon (NM_011566, exon 2 of 13) exon (NM_011566, exon 2 of 13) 8803 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-26 chr3 102337382 102337609 + 0.519648556297791 NA Intergenic Intergenic 75090 NR_040391 319951 Mm.225196 NR_040391 ENSMUSG00000105891 A230001M10Rik - RIKEN cDNA A230001M10 gene ncRNA unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-11 chr15 85538447 85538692 + 0.519648556297791 NA intron (NM_009528, intron 3 of 3) intron (NM_009528, intron 3 of 3) -35342 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-2 chr10 80940200 80940496 + 0.519648556297791 NA Intergenic ID_B1|SINE|B4 10257 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-10 chr4 130573624 130573883 + 0.519648556297791 NA intron (NM_025998, intron 1 of 6) CpG 283 NM_025998 67149 Mm.423029 NM_025998 ENSMUSG00000078532 Nkain1 2610200G18Rik|2810426C15Rik Na+/K+ transporting ATPase interacting 1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-15 chr16 3958780 3959089 + 0.519648556297791 NA exon (NM_175547, exon 3 of 15) exon (NM_175547, exon 3 of 15) 17698 NM_175547 268857 Mm.215994 NM_175547 ENSMUSG00000049871 Nlrc3 CLR16.2|D230007K08Rik|mFLJ00348 NLR family, CARD domain containing 3 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-6 chr11 72843254 72843565 + 0.519648556297791 NA intron (NM_001045536, intron 10 of 54) intron (NM_001045536, intron 10 of 54) 47183 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-3 chr1 162460574 162460810 + 0.519648556297791 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 17342 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-22 chr4 114958936 114959288 + 0.519648556297791 NA Intergenic Intergenic 28116 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-36 chr8 64639756 64640073 + 0.519648556297791 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 53195 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-7 chr8 34275976 34276205 + 0.519648556297791 NA Intergenic Intergenic -109378 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-5 chr15 66816195 66816556 + 0.519648556297791 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 15454 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-6 chr11 79094830 79095236 + 0.519648556297791 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) -35197 NM_001348207 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-35 chrX 99241598 99241831 + 0.519648556297791 NA Intergenic Intergenic 105653 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-3 chr10 83149852 83150160 + 0.519648556297791 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 164509 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-5 chr13 32939056 32939285 + 0.519648556297791 NA Intergenic Intergenic -26343 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-14 chr17 87264450 87264782 + 0.519648556297791 NA intron (NM_176808, intron 1 of 4) intron (NM_176808, intron 1 of 4) 1331 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-2 chr1 82578883 82579291 + 0.519648556297791 NA intron (NM_007735, intron 1 of 47) (TTAG)n|Simple_repeat|Simple_repeat 7762 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-13 chr9 78442659 78442936 + 0.519648556297791 NA exon (NM_173386, exon 1 of 5) exon (NM_173386, exon 1 of 5) 440 NR_125721 214763 Mm.101559 NM_173386 ENSMUSG00000032344 Mb21d1 E330016A19Rik|cGAS Mab-21 domain containing 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-23 chr5 102856282 102856735 + 0.519648556297791 NA intron (NM_001346585, intron 1 of 6) intron (NM_001346585, intron 1 of 6) 11501 NM_001346585 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-9 chr2 119350821 119351027 + 0.519648556297791 NA promoter-TSS (NM_026929) promoter-TSS (NM_026929) -318 NM_026929 69065 Mm.35083 NM_026929 ENSMUSG00000027313 Chac1 1810008K03Rik ChaC, cation transport regulator 1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-25 chr3 84283776 84284087 + 0.519648556297791 NA intron (NM_001271726, intron 1 of 11) intron (NM_001271726, intron 1 of 11) -13148 NM_001271725 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-39 chrX 94060941 94061344 + 0.519648556297791 NA Intergenic A-rich|Low_complexity|Low_complexity 62265 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-6 chr15 6278618 6278817 + 0.519648556297791 NA Intergenic Intergenic -21072 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-27 chr6 55179449 55179656 + 0.519648556297791 NA Intergenic Intergenic -4562 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding unique_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-5 chr4 109204288 109204524 + 0.519648556297791 NA Intergenic Intergenic -2134 NM_001346502 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-20 chr2 24480111 24480411 + 0.519648556297791 NA Intergenic Intergenic -4662 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-2 chr2 20520204 20520451 + 0.519648556297791 NA intron (NM_001177630, intron 1 of 17) intron (NM_001177630, intron 1 of 17) 814 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-35 chr7 137087810 137088071 + 0.519648556297791 NA intron (NM_008598, intron 3 of 4) intron (NM_008598, intron 3 of 4) -146743 NR_045885 100038555 Mm.444788 NR_045885 ENSMUSG00000109722 Gm10578 - predicted gene 10578 ncRNA common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-2 chr1 171330108 171330343 + 0.519648556297791 NA intron (NM_001357553, intron 1 of 4) intron (NM_001357553, intron 1 of 4) 656 NM_001357553 21945 Mm.270139 NM_011615 ENSMUSG00000013973 Dedd CASP8IP1|DEFT|Dedpro1|FLDED1|KE05 death effector domain-containing protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-13 chr14 55746039 55746276 + 0.519648556297791 NA promoter-TSS (NM_026819) promoter-TSS (NM_026819) 464 NM_026403 67842 Mm.180338 NM_026403 ENSMUSG00000019297 Nop9 2610027L16Rik NOP9 nucleolar protein protein-coding common_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-6 chr5 77370328 77370563 + 0.519648556297791 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 37600 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-24 chr2 168455303 168455606 + 0.519648556297791 NA Intergenic MIRb|SINE|MIR 134911 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791 chr1 131512723 131513145 + 0.519648556297791 NA intron (NM_001081011, intron 2 of 22) intron (NM_001081011, intron 2 of 22) 14427 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-20 chr4 11736924 11737199 + 0.519648556297791 NA Intergenic Intergenic -21096 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791 chr1 132347637 132347882 + 0.519648556297791 NA Intergenic MER34A|LTR|ERV1 20189 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-13 chr17 35394199 35394526 + 0.519648556297791 NA non-coding (NR_051981, exon 2 of 3) non-coding (NR_051981, exon 2 of 3) 263 NR_051981 15016 Mm.439648 NR_051981 ENSMUSG00000055413 H2-Q5 H-2Q5|Qa-5|Qa5|Qat-5 histocompatibility 2, Q region locus 5 pseudo common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-8 chr17 56360014 56360384 + 0.519648556297791 NA intron (NM_172132, intron 5 of 22) intron (NM_172132, intron 5 of 22) 34149 NM_001357909 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b lysine (K)-specific demethylase 4B protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-5 chr11 4289463 4289703 + 0.519648556297791 NA Intergenic Intergenic 22787 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-4 chr10 96015595 96015788 + 0.519648556297791 NA intron (NM_001001932, intron 13 of 28) intron (NM_001001932, intron 13 of 28) 75028 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-7 chr17 14171889 14172193 + 0.519648556297791 NA Intergenic Intergenic 31790 NM_172826 240025 Mm.79993 NM_172826 ENSMUSG00000048826 Dact2 2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2 dishevelled-binding antagonist of beta-catenin 2 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-24 chr5 104381776 104382031 + 0.519648556297791 NA Intergenic Intergenic -53208 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-6 chr4 130101440 130101687 + 0.519648556297791 NA Intergenic Intergenic -5993 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-12 chr7 34133363 34133620 + 0.519648556297791 NA promoter-TSS (NM_207212) promoter-TSS (NM_207212) -223 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-38 chr9 124279888 124280135 + 0.519648556297791 NA Intergenic Intergenic 32683 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-5 chr2 118043742 118043996 + 0.519648556297791 NA intron (NR_126479, intron 4 of 9) intron (NR_126479, intron 4 of 9) 67333 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791 chr1 160057353 160057572 + 0.519648556297791 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 13082 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-3 chr4 15958682 15958907 + 0.519648556297791 NA intron (NM_013752, intron 1 of 15) ID_B1|SINE|B4 827 NM_013752 27354 Mm.20866 NM_013752 ENSMUSG00000028224 Nbn Nbs1 nibrin protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-34 chr7 81178966 81179435 + 0.519648556297791 NA Intergenic ID_B1|SINE|B4 -34604 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-11 chr3 103171218 103171505 + 0.519648556297791 NA promoter-TSS (NM_026602) promoter-TSS (NM_026602) -294 NM_026602 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-32 chr6 125008524 125008762 + 0.519648556297791 NA promoter-TSS (NM_001252083) promoter-TSS (NM_001252083) -595 NM_001252083 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-9 chr13 69595286 69595541 + 0.519648556297791 NA intron (NM_175283, intron 2 of 4) intron (NM_175283, intron 2 of 4) 16050 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-6 chr6 50391477 50391842 + 0.519648556297791 NA intron (NM_001163645, intron 2 of 21) B1_Mus2|SINE|Alu -8822 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-18 chr3 49757221 49757561 + 0.519648556297791 NA promoter-TSS (NM_130448) promoter-TSS (NM_130448) -75 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-5 chr5 77366260 77366508 + 0.519648556297791 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 41661 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-13 chr7 144964709 144964915 + 0.519648556297791 NA Intergenic Intergenic -24887 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-37 chr9 59353560 59353764 + 0.519648556297791 NA promoter-TSS (NM_175325) promoter-TSS (NM_175325) -154 NM_175325 102774 Mm.200714 NM_175325 ENSMUSG00000025235 Bbs4 AW537059|AW742241|D9Ertd464e Bardet-Biedl syndrome 4 (human) protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-33 chr9 18473220 18473494 + 0.519648556297791 NA 5' UTR (NM_028935, exon 1 of 8) 5' UTR (NM_028935, exon 1 of 8) 202 NM_028935 72230 Mm.289689 NM_028160 ENSMUSG00000074500 Zfp558 1700007A21Rik|4932704I17Rik|Zfp558-ps zinc finger protein 558 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-11 chr13 43202837 43203142 + 0.519648556297791 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -31488 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-4 chr12 77973288 77973554 + 0.519648556297791 NA Intergenic Intergenic -253234 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791 chr1 189799837 189800076 + 0.519648556297791 NA intron (NM_008976, intron 3 of 18) intron (NM_008976, intron 3 of 18) 71688 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-25 chr5 137033070 137033406 + 0.519648556297791 NA 3' UTR (NM_001039385, exon 2 of 2) 3' UTR (NM_001039385, exon 2 of 2) 2943 NM_001039385 381677 Mm.389697 NM_001039385 ENSMUSG00000037428 Vgf Gm1052 VGF nerve growth factor inducible protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-21 chr4 57301609 57301986 + 0.519648556297791 NA promoter-TSS (NM_011207) promoter-TSS (NM_011207) 40 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-4 chr11 8580225 8580418 + 0.519648556297791 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 84214 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-16 chr16 30188976 30189324 + 0.519648556297791 NA Intergenic Intergenic 78382 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-9 chr12 99063233 99063483 + 0.519648556297791 NA Intergenic Intergenic 99450 NR_038130 67639 Mm.87374 NR_038130 ENSMUSG00000113210 4930474N09Rik - RIKEN cDNA 4930474N09 gene ncRNA unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-19 chr18 34900943 34901175 + 0.519648556297791 NA Intergenic Intergenic 30944 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-7 chr11 102965407 102965695 + 0.519648556297791 NA Intergenic Intergenic -1397 NR_037963 69739 Mm.276539 NR_037963 ENSMUSG00000085338 2410004I01Rik - RIKEN cDNA 2410004I01 gene ncRNA unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-2 chr10 61695587 61695846 + 0.519648556297791 NA exon (NM_001272090, exon 1 of 4) exon (NM_001272090, exon 1 of 4) 130 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-31 chr6 83124883 83125105 + 0.519648556297791 NA promoter-TSS (NM_023547) promoter-TSS (NM_023547) 35 NM_023547 70020 Mm.27814 NM_023547 ENSMUSG00000030034 Ino80b 2510009I23Rik|HMG1YL4|Hmga1l4|Papa1|Znhit4 INO80 complex subunit B protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-12 chr7 110002803 110003082 + 0.519648556297791 NA intron (NR_037959, intron 2 of 2) MLTR14|LTR|ERV1 3704 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA unique_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791 chr16 45075983 45076229 + 0.519648556297791 NA Intergenic Intergenic -17905 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-10 chr2 137730538 137730804 + 0.519648556297791 NA Intergenic Intergenic -525913 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-4 chr19 47217207 47217422 + 0.519648556297791 NA intron (NM_021360, intron 1 of 5) intron (NM_021360, intron 1 of 5) -11529 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791 chr1 51143109 51143528 + 0.519648556297791 NA intron (NM_019790, intron 7 of 9) intron (NM_019790, intron 7 of 9) -145808 NM_138741 20324 Mm.398690 NM_138741 ENSMUSG00000045954 Cavin2 Sdpr caveolae associated 2 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-14 chr15 41748542 41748816 + 0.519648556297791 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -40316 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-31 chr8 36590788 36591195 + 0.519648556297791 NA intron (NM_001194940, intron 7 of 17) intron (NM_001194940, intron 7 of 17) 22952 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-26 chr6 21949765 21949992 + 0.519648556297791 NA intron (NM_001311061, intron 1 of 11) CpG 263 NM_023626 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-9 chr2 60686198 60686408 + 0.519648556297791 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -12610 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak2_17_10_0.439334609608652_3.67909892344162_0.519648556297791-3 chr16 18897006 18897254 + 0.519648556297791 NA intron (NM_010435, intron 3 of 24) intron (NM_010435, intron 3 of 24) 20380 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-21 chr2 25557261 25557450 + 0.519648556297791 NA promoter-TSS (NM_021519) promoter-TSS (NM_021519) -545 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak1_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-2 chr2 132613070 132613436 + 0.519648556297791 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 15057 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA common_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-15 chr8 84067732 84067944 + 0.519648556297791 NA intron (NM_009055, intron 1 of 20) intron (NM_009055, intron 1 of 20) 1002 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-10 chr14 31929670 31929926 + 0.519648556297791 NA Intergenic Intergenic -99305 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-16 chr19 46406857 46407078 + 0.519648556297791 NA intron (NM_001025391, intron 2 of 11) intron (NM_001025391, intron 2 of 11) 10071 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) SUFU negative regulator of hedgehog signaling protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-30 chr6 72981478 72981762 + 0.519648556297791 NA Intergenic Intergenic -22872 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-7 chr11 87126567 87126842 + 0.519648556297791 NA promoter-TSS (NM_197987) promoter-TSS (NM_197987) -371 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding unique_peak1_17_10_0.439334609608652_3.67909892344162_0.519648556297791-29 chr6 67037742 67038003 + 0.519648556297791 NA promoter-TSS (NM_007836) promoter-TSS (NM_007836) -465 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding common_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-6 chr15 99401978 99402208 + 0.519648556297791 NA exon (NM_026669, exon 3 of 10) exon (NM_026669, exon 3 of 10) 8874 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak2_11_15_-0.682069373981505_3.65896531300925_0.519648556297791-19 chr3 65634368 65634682 + 0.519648556297791 NA Intergenic Intergenic -24763 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-14 chr3 101601911 101602162 + 0.519193887192487 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 2671 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-19 chr8 109763748 109763989 + 0.519193887192487 NA Intergenic Intergenic -14715 NM_009677 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-10 chr16 6842410 6842756 + 0.519193887192487 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -196787 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-3 chr14 99300119 99300361 + 0.519193887192487 NA intron (NM_009769, intron 1 of 3) intron (NM_009769, intron 1 of 3) 1549 NM_009769 12224 Mm.30262 NM_009769 ENSMUSG00000005148 Klf5 4930520J07Rik|Bteb2|CKLF|IKLF Kruppel-like factor 5 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-2 chr11 75410519 75410920 + 0.519193887192487 NA intron (NM_011340, intron 7 of 7) intron (NM_011340, intron 7 of 7) 11904 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-9 chr3 144642755 144643103 + 0.519193887192487 NA Intergenic Intergenic 72502 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-12 chr5 65390283 65390586 + 0.519193887192487 NA exon (NM_011292, exon 4 of 8) exon (NM_011292, exon 4 of 8) 997 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487 chr10 17548670 17548942 + 0.519193887192487 NA Intergenic Intergenic -174422 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-5 chr3 66215307 66215641 + 0.519193887192487 NA exon (NM_145820, exon 5 of 14) exon (NM_145820, exon 5 of 14) -4413 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-6 chr18 33795708 33796095 + 0.519193887192487 NA TTS (NR_038151) TTS (NR_038151) 1009 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-8 chr14 16484236 16484570 + 0.519193887192487 NA intron (NM_001289760, intron 5 of 9) intron (NM_001289760, intron 5 of 9) 91073 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-12 chr5 30851175 30851443 + 0.519193887192487 NA intron (NM_133350, intron 1 of 6) intron (NM_133350, intron 1 of 6) -10498 NM_001310516 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-11 chr19 21105749 21106078 + 0.519193887192487 NA TTS (NR_126458) TTS (NR_126458) 1203 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487 chr1 173767225 173767467 + 0.519193887192487 NA promoter-TSS (NM_008329) promoter-TSS (NM_008329) -427 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487 chr1 16271729 16272068 + 0.519193887192487 NA intron (NM_001111272, intron 11 of 12) intron (NM_001111272, intron 11 of 12) 166016 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-3 chr14 76715364 76715734 + 0.519193887192487 NA Intergenic Intergenic 37981 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487 chr1 173767227 173767488 + 0.519193887192487 NA promoter-TSS (NM_008329) promoter-TSS (NM_008329) -438 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487 chr12 31291356 31291699 + 0.519193887192487 NA intron (NM_008482, intron 12 of 32) intron (NM_008482, intron 12 of 32) 26233 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-21 chr5 134951217 134951692 + 0.519193887192487 NA Intergenic Intergenic -4520 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-13 chr17 31326374 31326729 + 0.519193887192487 NA intron (NM_001242427, intron 9 of 19) intron (NM_001242427, intron 9 of 19) 30327 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-4 chr16 6963158 6963448 + 0.519193887192487 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -76067 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-24 chrX 94724574 94724907 + 0.519193887192487 NA exon (NM_001081473, exon 1 of 1) exon (NM_001081473, exon 1 of 1) 171 NM_001081473 668166 Mm.426145 NM_001081473 ENSMUSG00000073062 Zxdb Zxda zinc finger, X-linked, duplicated B protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-13 chr2 13271026 13271289 + 0.519193887192487 NA intron (NM_009105, intron 1 of 8) intron (NM_009105, intron 1 of 8) 258 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-13 chr7 109637916 109638347 + 0.519193887192487 NA Intergenic Intergenic -20984 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-8 chr19 5085080 5085433 + 0.519193887192487 NA intron (NM_001001885, intron 1 of 1) intron (NM_001001885, intron 1 of 1) 221 NM_001001885 381199 Mm.329663 NM_001001885 ENSMUSG00000061451 Tmem151a AW125688|Gm961|Tmem151 transmembrane protein 151A protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-11 chr8 110965941 110966305 + 0.519193887192487 NA intron (NM_009179, intron 3 of 6) intron (NM_009179, intron 3 of 6) 31700 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-24 chr8 126903655 126904056 + 0.519193887192487 NA Intergenic Intergenic 42066 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-4 chr2 145755538 145755959 + 0.519193887192487 NA Intergenic Intergenic -30368 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-3 chr13 24105928 24106343 + 0.519193887192487 NA intron (NM_026825, intron 17 of 37) intron (NM_026825, intron 17 of 37) -114921 NM_145399 214189 Mm.255667 NM_145399 ENSMUSG00000021337 Scgn - secretagogin, EF-hand calcium binding protein protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-2 chr12 73308143 73308484 + 0.519193887192487 NA intron (NM_001037717, intron 3 of 15) intron (NM_001037717, intron 3 of 15) 21465 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-17 chr6 34743804 34744203 + 0.519193887192487 NA intron (NM_145575, intron 2 of 11) intron (NM_145575, intron 2 of 11) 34559 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-6 chr12 82170652 82171047 + 0.519193887192487 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 833 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-17 chr18 75382672 75383104 + 0.519193887192487 NA intron (NM_001042660, intron 3 of 3) AT_rich|Low_complexity|Low_complexity 15523 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-9 chr3 19204427 19204678 + 0.519193887192487 NA intron (NM_001356295, intron 2 of 7) intron (NM_001356295, intron 2 of 7) 16257 NM_001356295 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-11 chr7 112300908 112301193 + 0.519193887192487 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) -67258 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-12 chr16 86346238 86346782 + 0.519193887192487 NA Intergenic ID_B1|SINE|B4 -445385 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-14 chr7 144647151 144647388 + 0.519193887192487 NA intron (NM_001242349, intron 8 of 24) intron (NM_001242349, intron 8 of 24) -64833 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-13 chr6 122870220 122870544 + 0.519193887192487 NA Intergenic Intergenic -4175 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-9 chr15 77307246 77307459 + 0.519193887192487 NA promoter-TSS (NM_001110827) promoter-TSS (NM_001110827) -299 NM_053104 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-7 chr18 75389453 75389840 + 0.519193887192487 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 22281 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-23 chrX 75834544 75834911 + 0.519193887192487 NA intron (NM_001346519, intron 1 of 16) intron (NM_001346519, intron 1 of 16) 8294 NM_001166454 102866 Mm.28777 NM_145629 ENSMUSG00000016382 Pls3 AI115446|AL024105 plastin 3 (T-isoform) protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-15 chr9 35026425 35026737 + 0.519193887192487 NA intron (NM_001190912, intron 12 of 15) intron (NM_001190912, intron 12 of 15) -90147 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-19 chr4 151798106 151798436 + 0.519193887192487 NA intron (NM_001195565, intron 3 of 3) intron (NM_001195565, intron 3 of 3) 63497 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-10 chr4 43875580 43875930 + 0.519193887192487 NA intron (NM_016678, intron 1 of 20) CpG 225 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-16 chr18 68083452 68083799 + 0.519193887192487 NA intron (NM_172631, intron 2 of 5) intron (NM_172631, intron 2 of 5) -144321 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-10 chr4 141875150 141875527 + 0.519193887192487 NA promoter-TSS (NM_025994) promoter-TSS (NM_025994) -418 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-23 chr8 104436559 104436896 + 0.519193887192487 NA intron (NM_001013380, intron 4 of 12) intron (NM_001013380, intron 4 of 12) 6320 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-10 chr7 29281757 29282096 + 0.519193887192487 NA promoter-TSS (NM_011464) promoter-TSS (NM_011464) 51 NM_001082548 20733 Mm.295230 NM_011464 ENSMUSG00000074227 Spint2 AL024025|C76321|HAI-2 serine protease inhibitor, Kunitz type 2 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-5 chr12 3351163 3351443 + 0.519193887192487 NA Intergenic Intergenic -13829 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-22 chrX 38456039 38456419 + 0.519193887192487 NA intron (NR_152733, intron 1 of 9) intron (NR_152733, intron 1 of 9) 231 NR_152733 16784 Mm.486 NM_010685 ENSMUSG00000016534 Lamp2 CD107b|LGP-B|Lamp II|Lamp-2|Lamp-2a|Lamp-2b|Lamp-2c|Mac3 lysosomal-associated membrane protein 2 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-14 chr17 56266144 56266384 + 0.519193887192487 NA Intergenic Intergenic 9471 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-8 chr19 18757153 18757359 + 0.519193887192487 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 7273 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-7 chr12 79609043 79609358 + 0.519193887192487 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 311849 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-18 chr4 134551681 134552026 + 0.519193887192487 NA intron (NM_029100, intron 1 of 11) intron (NM_029100, intron 1 of 11) 313 NM_029100 74777 Mm.29773 NM_029100 ENSMUSG00000050989 Selenon 1110019I12Rik|AI414492|SelN|Sepn1 selenoprotein N protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-26 chr9 108650032 108650289 + 0.519193887192487 NA promoter-TSS (NM_011790) promoter-TSS (NM_011790) -752 NM_001357286 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-9 chr3 131271563 131271880 + 0.519193887192487 NA intron (NM_008212, intron 1 of 7) CpG 380 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-6 chr17 71000690 71001086 + 0.519193887192487 NA intron (NM_026064, intron 1 of 3) intron (NM_026064, intron 1 of 3) 1645 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-15 chr3 102475326 102475664 + 0.519193887192487 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 5576 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-4 chr10 79683323 79683569 + 0.519193887192487 NA intron (NM_001359818, intron 1 of 4) intron (NM_001359818, intron 1 of 4) 1251 NM_001359817 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-11 chr4 143412848 143413176 + 0.519193887192487 NA 5' UTR (NM_001355724, exon 1 of 4) 5' UTR (NM_001355724, exon 1 of 4) 586 NM_001355724 242736 Mm.275953 NM_172877 ENSMUSG00000046862 Pramef8 4732496O08Rik|AU023234 PRAME family member 8 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-7 chr18 60890116 60890375 + 0.519193887192487 NA Intergenic Intergenic -21995 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-8 chr13 64274595 64274983 + 0.519193887192487 NA 5' UTR (NM_172587, exon 1 of 14) 5' UTR (NM_172587, exon 1 of 14) 199 NM_172587 218294 Mm.25335 NM_172587 ENSMUSG00000033102 Cdc14b 2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1 CDC14 cell division cycle 14B protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-6 chr6 34274863 34275274 + 0.519193887192487 NA Intergenic Intergenic 42375 NR_037965 626009 Mm.451 NR_028277 Gm6644 Akr1b3p|EG626009 Akr1b3 pseudogene pseudo common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-2 chr12 111431924 111432194 + 0.519193887192487 NA TTS (NM_028807) TTS (NM_028807) -10602 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-5 chr16 33381683 33381908 + 0.519193887192487 NA 5' UTR (NM_001358570, exon 1 of 9) 5' UTR (NM_001358570, exon 1 of 9) 493 NM_001358570 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-6 chr12 33285750 33285979 + 0.519193887192487 NA Intergenic Intergenic -16651 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-21 chr9 124464695 124464981 + 0.519193887192487 NA Intergenic Intergenic 12024 NM_001163415 19054 Mm.271249 NM_011154 ENSMUSG00000093803 Ppp2r3d PP2A B''-PR59|PP2A PR59|PR59|Ppp2r3|Ppp2r3a protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-13 chr8 34761440 34761713 + 0.519193887192487 NA Intergenic Intergenic -46034 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-2 chr10 76238014 76238253 + 0.519193887192487 NA promoter-TSS (NR_126571) promoter-TSS (NR_126571) -268 NM_133182 15468 Mm.32020 NM_133182 ENSMUSG00000020230 Prmt2 AI504737|Hrmt1l1 protein arginine N-methyltransferase 2 protein-coding unique_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-3 chr8 64675382 64675769 + 0.519193887192487 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 17534 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-8 chr2 152792363 152792619 + 0.519193887192487 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 35998 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-8 chr6 115493860 115494290 + 0.519193887192487 NA Intergenic Intergenic -50629 NM_199033 381802 Mm.291208 NM_199033 ENSMUSG00000042389 Tsen2 AU067695 tRNA splicing endonuclease subunit 2 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487 chr1 183931134 183931592 + 0.519193887192487 NA Intergenic Intergenic 102635 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-25 chr9 101274821 101275204 + 0.519193887192487 NA Intergenic Intergenic -23180 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-3 chr10 77418422 77418764 + 0.519193887192487 NA promoter-TSS (NR_004429) promoter-TSS (NR_004429) 217 NR_027377 100045653 Mm.363175 NR_027377 Gm17769 - predicted gene, 17769 ncRNA common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-2 chr10 60821438 60821667 + 0.519193887192487 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 10029 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-18 chr6 52184206 52184484 + 0.519193887192487 NA intron (NM_010452, intron 2 of 4) intron (NM_010452, intron 2 of 4) 7358 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-10 chr4 47151248 47151637 + 0.519193887192487 NA Intergenic Intergenic -56570 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-7 chr6 100799680 100799939 + 0.519193887192487 NA intron (NM_198612, intron 6 of 6) intron (NM_198612, intron 6 of 6) -33829 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-5 chr11 65806269 65806592 + 0.519193887192487 NA promoter-TSS (NM_026107) promoter-TSS (NM_026107) -745 NM_001302374 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding unique_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487 chr15 58762227 58762565 + 0.519193887192487 NA Intergenic Intergenic 61031 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-14 chr8 120065345 120065693 + 0.519193887192487 NA Intergenic Intergenic 35953 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-10 chr18 34220401 34220717 + 0.519193887192487 NA promoter-TSS (NM_007462) promoter-TSS (NM_007462) -425 NM_007462 11789 Mm.384171 NM_007462 ENSMUSG00000005871 Apc AI047805|AU020952|AW124434|CC1|Min|mAPC adenomatosis polyposis coli protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-20 chr9 122886947 122887171 + 0.519193887192487 NA Intergenic CpG -1412 NM_001177505 382118 Mm.86999 NM_001177505 ENSMUSG00000063488 Zkscan7 BC042569|Zfp167 zinc finger with KRAB and SCAN domains 7 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-7 chr13 5838560 5839044 + 0.519193887192487 NA Intergenic Intergenic 19290 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-4 chr15 77803273 77803808 + 0.519193887192487 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 38635 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-15 chr17 80707413 80707737 + 0.519193887192487 NA intron (NM_001360278, intron 1 of 33) intron (NM_001360278, intron 1 of 33) 20450 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-7 chr18 65745222 65745414 + 0.519193887192487 NA exon (NM_177028, exon 12 of 15) exon (NM_177028, exon 12 of 15) 47050 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-16 chr5 151108492 151108972 + 0.519193887192487 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 81461 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-4 chr11 18584871 18585161 + 0.519193887192487 NA Intergenic Intergenic 433953 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-3 chr13 15777314 15777672 + 0.519193887192487 NA Intergenic Intergenic 25137 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-4 chr17 26612289 26612551 + 0.519193887192487 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 50908 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-5 chr17 34647323 34647530 + 0.519193887192487 NA intron (NM_017406, intron 1 of 17) CpG 280 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-9 chr15 11699598 11700012 + 0.519193887192487 NA Intergenic Intergenic 205869 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-20 chr5 44157204 44157596 + 0.519193887192487 NA Intergenic Intergenic -55664 NM_001163577 19126 Mm.6250 NM_008935 ENSMUSG00000029086 Prom1 4932416E19Rik|AC133|CD133|Prom|Prom-1|Proml1 prominin 1 protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-5 chr18 12941504 12941826 + 0.519193887192487 NA 5' UTR (NM_207530, exon 1 of 28) 5' UTR (NM_207530, exon 1 of 28) 176 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_25_15_0.425538174455113_4.21276908722756_0.519193887192487-15 chr9 57643025 57643320 + 0.519193887192487 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 2481 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-6 chr17 4947012 4947200 + 0.519193887192487 NA Intergenic Intergenic -47968 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-12 chr7 145044555 145044838 + 0.519193887192487 NA Intergenic Intergenic -104771 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-11 chr16 23166693 23167127 + 0.519193887192487 NA Intergenic Intergenic -8370 NR_155420 105246089 Mm.390905 NR_155420 C730014E05Rik - RIKEN cDNA C730014E05 gene ncRNA unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-2 chr11 104288556 104288988 + 0.519193887192487 NA intron (NM_001038609, intron 3 of 11) intron (NM_001038609, intron 3 of 11) 57336 NM_001285454 17762 Mm.1287 NM_010838 ENSMUSG00000018411 Mapt AI413597|AW045860|Mtapt|Tau microtubule-associated protein tau protein-coding common_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-11 chr4 156110086 156110292 + 0.519193887192487 NA intron (NM_177205, intron 1 of 9) CpG 191 NM_177205 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding unique_peak1_25_15_0.425538174455113_4.21276908722756_0.519193887192487-9 chr7 28939259 28939634 + 0.519193887192487 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 22886 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-3 chr10 61679788 61680096 + 0.519193887192487 NA promoter-TSS (NM_001358488) promoter-TSS (NM_001358488) -343 NM_001358488 20224 Mm.391794 NM_009120 ENSMUSG00000020088 Sar1a 1600019H17Rik|Sara|Sara1 secretion associated Ras related GTPase 1A protein-coding common_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-16 chr9 108003243 108003471 + 0.519193887192487 NA intron (NM_013785, intron 1 of 5) intron (NM_013785, intron 1 of 5) 709 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-12 chr19 58533657 58533991 + 0.519193887192487 NA intron (NM_029372, intron 5 of 8) intron (NM_029372, intron 5 of 8) 21822 NM_029372 75645 Mm.159542 NM_029372 ENSMUSG00000025090 Ccdc172 1700011F14Rik coiled-coil domain containing 172 protein-coding unique_peak2_24_15_0.369353841725552_4.18467692086278_0.519193887192487-2 chr7 43672089 43672378 + 0.519193887192487 NA intron (NM_145582, intron 1 of 2) intron (NM_145582, intron 1 of 2) 202 NM_145582 233189 Mm.26514 NM_145582 ENSMUSG00000038888 Ctu1 Atpbd3|BC005752 cytosolic thiouridylase subunit 1 protein-coding unique_peak1_24_15_0.369353841725552_4.18467692086278_0.519193887192487-22 chr7 125672362 125672755 + 0.519193887192487 NA intron (NM_207239, intron 12 of 36) intron (NM_207239, intron 12 of 36) 35130 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-5 chr2 84522754 84523122 + 0.519193887192484 NA Intergenic Intergenic -16065 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-3 chr15 77801693 77801940 + 0.519193887192484 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 40359 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-14 chr7 144646303 144646785 + 0.519193887192484 NA intron (NM_001242349, intron 8 of 24) intron (NM_001242349, intron 8 of 24) -64108 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-7 chr4 32304295 32304598 + 0.519193887192484 NA Intergenic Intergenic -112989 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-2 chr12 86109334 86109765 + 0.519193887192484 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 26988 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-10 chr19 8897477 8897789 + 0.519193887192484 NA promoter-TSS (NM_008060) promoter-TSS (NM_008060) -424 NM_001293621 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-8 chr18 4736766 4737130 + 0.519193887192484 NA Intergenic Intergenic -75538 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-19 chr6 119333032 119333273 + 0.519193887192484 NA intron (NM_001362214, intron 1 of 11) intron (NM_001362214, intron 1 of 11) -2386 NM_172492 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding unique_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484 chr2 126311580 126312171 + 0.519193887192484 NA Intergenic Intergenic 159734 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-12 chr5 123572640 123572958 + 0.519193887192484 NA intron (NM_001359513, intron 1 of 11) CpG 216 NM_001359513 77573 Mm.41372 NM_029929 ENSMUSG00000029434 Vps33a 3830421M04Rik|AI503300|AW048546|AW554476|bf VPS33A CORVET/HOPS core subunit protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-10 chr6 38381074 38381407 + 0.519193887192484 NA promoter-TSS (NM_153600) promoter-TSS (NM_153600) -284 NM_153600 264134 Mm.253446 NM_153600 ENSMUSG00000056832 Ttc26 9330141E21Rik|9430097H08Rik|Ift56|hop|hpy tetratricopeptide repeat domain 26 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-5 chr16 8811038 8811476 + 0.519193887192484 NA Intergenic Intergenic -18843 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-12 chr2 163822564 163823076 + 0.519193887192484 NA intron (NM_016873, intron 2 of 4) intron (NM_016873, intron 2 of 4) 1986 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-11 chr7 27488315 27488585 + 0.519193887192484 NA intron (NM_018820, intron 1 of 1) intron (NM_018820, intron 1 of 1) 1497 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-17 chr8 92357927 92358177 + 0.519193887192484 NA 5' UTR (NM_018826, exon 1 of 3) 5' UTR (NM_018826, exon 1 of 3) 256 NM_018826 54352 Mm.101153 NM_018826 ENSMUSG00000031737 Irx5 - Iroquois homeobox 5 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-2 chr12 95599785 95599995 + 0.519193887192484 NA Intergenic Intergenic -92336 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-11 chr2 129208495 129208920 + 0.519193887192484 NA intron (NM_015747, intron 8 of 10) intron (NM_015747, intron 8 of 10) 1611 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-13 chr2 164941799 164942301 + 0.519193887192484 NA Intergenic Intergenic -6169 NM_013599 17395 Mm.4406 NM_013599 ENSMUSG00000017737 Mmp9 AW743869|B/MMP9|Clg4b|Gel B|MMP-9|pro-MMP-9 matrix metallopeptidase 9 protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-9 chr5 124439211 124439450 + 0.519193887192484 NA promoter-TSS (NM_030241) promoter-TSS (NM_030241) -600 NM_030241 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484 chr11 96943605 96943902 + 0.519193887192484 NA promoter-TSS (NR_003293) promoter-TSS (NR_003293) 266 NM_134021 103711 Mm.254704 NM_134021 ENSMUSG00000018659 Pnpo AI415282 pyridoxine 5'-phosphate oxidase protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-3 chr13 5871804 5872078 + 0.519193887192484 NA Intergenic Intergenic 10452 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-7 chr17 24960267 24960581 + 0.519193887192484 NA TTS (NM_020608) TTS (NM_020608) 199 NM_198937 52009 Mm.371601 NM_198937 ENSMUSG00000024165 Jpt2 2810430B18Rik|AL022629|C16orf34|D17Ertd441e|Hn1l Jupiter microtubule associated homolog 2 protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-5 chr2 68985073 68985367 + 0.519193887192484 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 123779 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-7 chr2 163349729 163349969 + 0.519193887192484 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 48124 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-11 chr5 102845960 102846355 + 0.519193887192484 NA exon (NM_001346585, exon 1 of 7) exon (NM_001346585, exon 1 of 7) 1150 NM_001346585 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484 chr10 83153360 83153759 + 0.519193887192484 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 168062 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-4 chr16 25041861 25042170 + 0.519193887192484 NA Intergenic Intergenic -17624 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-2 chr11 31472612 31473111 + 0.519193887192484 NA Intergenic Intergenic -102800 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-14 chr4 132514438 132514871 + 0.519193887192484 NA Intergenic Intergenic -4198 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-9 chr18 77947452 77947694 + 0.519193887192484 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 9106 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-8 chr5 36460252 36460618 + 0.519193887192484 NA intron (NR_126490, intron 1 of 1) intron (NR_126490, intron 1 of 1) 4419 NR_126490 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-4 chr18 14783527 14783921 + 0.519193887192484 NA exon (NM_001100449, exon 1 of 15) exon (NM_001100449, exon 1 of 15) 479 NM_001100449 72504 Mm.312233 NM_001100449 ENSMUSG00000054321 Taf4b 105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2 TATA-box binding protein associated factor 4b protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484 chr12 27432027 27432230 + 0.519193887192484 NA Intergenic Intergenic -89410 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-9 chr4 154294277 154294587 + 0.519193887192484 NA intron (NM_001112744, intron 1 of 14) intron (NM_001112744, intron 1 of 14) 5463 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-6 chr16 18384143 18384559 + 0.519193887192484 NA intron (NM_001272028, intron 1 of 17) B1_Mur1|SINE|Alu 3568 NM_001272030 11877 Mm.293599 NM_033474 ENSMUSG00000000325 Arvcf - armadillo repeat gene deleted in velocardiofacial syndrome protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-15 chr4 156131254 156131612 + 0.519193887192484 NA intron (NM_001220499, intron 1 of 1) intron (NM_001220499, intron 1 of 1) 3945 NM_001220499 100045778 NM_001220499 ENSMUSG00000110404 Rnf223 9930005F22Rik ring finger 223 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-18 chr9 50001285 50001592 + 0.519193887192484 NA Intergenic Intergenic -202045 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-13 chr6 91687579 91687914 + 0.519193887192484 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 3679 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-6 chr2 153649739 153650110 + 0.519193887192484 NA intron (NM_001271744, intron 1 of 22) CpG 475 NM_001271747 13436 Mm.89772 NM_010068 ENSMUSG00000027478 Dnmt3b MmuIIIB DNA methyltransferase 3B protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-16 chr8 86885912 86886328 + 0.519193887192484 NA promoter-TSS (NM_030563) promoter-TSS (NM_030563) -862 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-16 chr5 32345713 32346083 + 0.519193887192484 NA intron (NM_001081407, intron 50 of 58) intron (NM_001081407, intron 50 of 58) -7682 NM_172147 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-6 chr2 180234975 180235264 + 0.519193887192484 NA Intergenic Intergenic -9260 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-4 chr13 70732593 70732972 + 0.519193887192484 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -95148 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-3 chr11 61930454 61930728 + 0.519193887192484 NA promoter-TSS (NM_019921) promoter-TSS (NM_019921) -334 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-17 chr5 36698604 36698938 + 0.519193887192484 NA Intergenic Intergenic -2750 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-20 chr9 75533864 75534171 + 0.519193887192484 NA intron (NM_001357828, intron 1 of 10) intron (NM_001357828, intron 1 of 10) 25640 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-15 chr8 25603274 25603498 + 0.519193887192484 NA intron (NM_001001735, intron 1 of 9) intron (NM_001001735, intron 1 of 9) 1102 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-10 chr5 77362848 77363290 + 0.519193887192484 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 44976 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding unique_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-18 chr6 117203822 117204258 + 0.519193887192484 NA Intergenic Intergenic 35505 NM_021704 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding common_peak2_17_21_-0.560665390391348_4.17909892344162_0.519193887192484-8 chr3 121726840 121727202 + 0.519193887192484 NA intron (NM_010171, intron 2 of 5) intron (NM_010171, intron 2 of 5) 3484 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-6 chr2 160731872 160732183 + 0.518921928796332 NA exon (NM_021280, exon 2 of 34) exon (NM_021280, exon 2 of 34) 717 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-10 chr7 79279159 79279629 + 0.518921928796332 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 6128 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-3 chr11 116851618 116852274 + 0.518921928796332 NA intron (NM_011358, intron 2 of 2) intron (NM_011358, intron 2 of 2) 1148 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-5 chr17 23192625 23193016 + 0.518921928796332 NA intron (NM_001357697, intron 1 of 5) intron (NM_001357697, intron 1 of 5) 408 NM_009555 22700 Mm.437934 NM_009555 ENSMUSG00000002617 Zfp40 CTfin12|NTfin12|Zfp-40 zinc finger protein 40 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-8 chr4 141883185 141883985 + 0.518921928796332 NA Intergenic B4A|SINE|B4 -8665 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332 chr1 83100086 83100713 + 0.518921928796332 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -16367 NM_016960 20297 Mm.116739 NM_016960 ENSMUSG00000026166 Ccl20 CKb4|LARC|MIP-3A|MIP-3[a]|MIP3A|ST38|Scya20|exodus-1 chemokine (C-C motif) ligand 20 protein-coding unique_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332 chr15 12824923 12825203 + 0.518921928796332 NA promoter-TSS (NM_029998) promoter-TSS (NM_029998) 248 NM_001130149 14000 Mm.293142 NM_026799 ENSMUSG00000022191 Drosha 1110013A17Rik|AI874853|Etohi2|Rn3|Rnasen drosha, ribonuclease type III protein-coding unique_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332 chr11 69098165 69098578 + 0.518921928796332 NA promoter-TSS (NM_011065) promoter-TSS (NM_011065) -578 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-2 chr10 3973280 3973562 + 0.518921928796332 NA exon (NM_172308, exon 1 of 28) exon (NM_172308, exon 1 of 28) 346 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-3 chr11 6267939 6268325 + 0.518921928796332 NA promoter-TSS (NM_026538) promoter-TSS (NM_026538) -403 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-7 chr2 155819341 155819816 + 0.518921928796332 NA promoter-TSS (NR_015528) promoter-TSS (NR_015528) -375 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA unique_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332 chr14 27059033 27059655 + 0.518921928796332 NA intron (NM_134437, intron 1 of 12) intron (NM_134437, intron 1 of 12) 20343 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-5 chr17 25755445 25755846 + 0.518921928796332 NA Intergenic Intergenic -1267 NM_001356286 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding unique_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-2 chr18 16807899 16808396 + 0.518921928796332 NA intron (NM_007664, intron 1 of 15) CpG 1099 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-5 chr17 6978961 6979317 + 0.518921928796332 NA intron (NM_026611, intron 1 of 8).2 intron (NM_026611, intron 1 of 8).2 279 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-12 chr8 84183571 84183890 + 0.518921928796332 NA Intergenic CpG -4769 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-4 chr11 86544994 86545269 + 0.518921928796332 NA promoter-TSS (NM_028259) promoter-TSS (NM_028259) 140 NM_001199046 56427 Mm.383207 NM_019756 ENSMUSG00000020513 Tubd1 4930550G19Rik|Tubd tubulin, delta 1 protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-10 chrX 73465825 73466120 + 0.518921928796332 NA Intergenic Intergenic -6943 NM_207104 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding common_peak1_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-2 chr10 67725846 67726313 + 0.518921928796332 NA Intergenic Intergenic -154120 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-6 chr18 38103439 38103971 + 0.518921928796332 NA Intergenic MIRb|SINE|MIR -104736 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-4 chr13 111807736 111808253 + 0.518921928796332 NA intron (NM_011945, intron 1 of 19) CpG 999 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-2 chr10 21833422 21833803 + 0.518921928796332 NA Intergenic Intergenic -48572 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-11 chr7 118855948 118856368 + 0.518921928796332 NA promoter-TSS (NM_001168220) promoter-TSS (NM_001168220) -160 NM_023197 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-7 chr4 138464236 138464642 + 0.518921928796332 NA Intergenic MIRb|SINE|MIR 9291 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-3 chr2 127292815 127293252 + 0.518921928796332 NA intron (NM_139308, intron 6 of 7) intron (NM_139308, intron 6 of 7) 22804 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-9 chr9 67036023 67036447 + 0.518921928796332 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) 7636 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-2 chr17 66352682 66353026 + 0.518921928796332 NA intron (NM_172963, intron 10 of 13) intron (NM_172963, intron 10 of 13) 96896 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-11 chr9 29342659 29343288 + 0.518921928796332 NA intron (NM_001357601, intron 1 of 7) intron (NM_001357601, intron 1 of 7) 69712 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding unique_peak2_33_21_0.350399238699154_4.63463123798687_0.518921928796332 chr4 129618743 129618993 + 0.518921928796332 NA TTS (NM_025455) TTS (NM_025455) 225 NM_198026 230767 Mm.441132 NM_198026 ENSMUSG00000040795 Iqcc BC026978 IQ motif containing C protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-14 chrX 105079733 105080117 + 0.518921928796332 NA intron (NM_001281871, intron 1 of 5) intron (NM_001281871, intron 1 of 5) 169 NM_026312 67683 Mm.273405 NM_026312 ENSMUSG00000031226 Pbdc1 2610029G23Rik polysaccharide biosynthesis domain containing 1 protein-coding unique_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-4 chr2 26314550 26315110 + 0.518921928796332 NA promoter-TSS (NM_001199146) promoter-TSS (NM_001199146) 213 NM_001355574 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding unique_peak1_24_28_-0.48862715340202_4.61366741842656_0.518921928796332 chr5 134958762 134959117 + 0.518921928796332 NA Intergenic ID_B1|SINE|B4 -12005 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-6 chr3 29903420 29903912 + 0.518921928796332 NA intron (NR_110437, intron 1 of 1) intron (NR_110437, intron 1 of 1) 12649 NR_110437 102636083 NR_110437 ENSMUSG00000102590 Mannr Manr Mecom adjacent non-protein coding RNA ncRNA common_peak2_33_21_0.350399238699154_4.63463123798687_0.518921928796332-2 chr12 76553843 76554260 + 0.518921928796332 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -6126 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_24_28_-0.48862715340202_4.61366741842656_0.518921928796332 chr1 128102693 128103000 + 0.518921928796332 NA promoter-TSS (NM_027678) promoter-TSS (NM_027678) 155 NM_001357573 226409 Mm.425048 NM_027678 ENSMUSG00000036086 Zranb3 4933425L19Rik|AH2|AI316834|C730006D09 zinc finger, RAN-binding domain containing 3 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-9 chr7 89611033 89611367 + 0.518921928796332 NA Intergenic Intergenic -21618 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-3 chr19 9975971 9976469 + 0.518921928796332 NA Intergenic Intergenic -4380 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-13 chr9 105643102 105643392 + 0.518921928796332 NA 5' UTR (NM_001081309, exon 1 of 20) 5' UTR (NM_001081309, exon 1 of 20) 252 NM_001081309 75669 Mm.274830 NM_029380 ENSMUSG00000032571 Pik3r4 2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e|Vps15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-9 chr7 109578578 109578911 + 0.518921928796332 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 37824 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-3 chr17 80789215 80789681 + 0.518921928796332 NA Intergenic Intergenic -61423 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_33_21_0.350399238699154_4.63463123798687_0.518921928796332-3 chr2 155236613 155236833 + 0.518921928796332 NA non-coding (NR_111890, exon 1 of 4) non-coding (NR_111890, exon 1 of 4) 115 NM_001291108 67068 Mm.23693 NM_025947 ENSMUSG00000047459 Dynlrb1 2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1 dynein light chain roadblock-type 1 protein-coding common_peak1_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-4 chr8 115705783 115706092 + 0.518921928796332 NA exon (NM_001025577, exon 1 of 1) exon (NM_001025577, exon 1 of 1) 957 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-7 chr8 34225592 34225982 + 0.518921928796332 NA Intergenic Intergenic -59075 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332 chr12 77039275 77039750 + 0.518921928796332 NA Intergenic Intergenic -77264 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-2 chr15 60838648 60838988 + 0.518921928796332 NA Intergenic Intergenic -13738 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332 chr1 193568935 193569250 + 0.518921928796332 NA Intergenic Intergenic -61562 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-8 chr7 16207901 16208139 + 0.518921928796332 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 13973 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-5 chr4 48492053 48492609 + 0.518921928796332 NA Intergenic Intergenic -18868 NM_001355740 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-3 chr11 59191551 59191875 + 0.518921928796332 NA intron (NM_008193, intron 1 of 7) CpG 239 NM_008193 14923 Mm.3624 NM_008193 ENSMUSG00000020444 Guk1 AA409738|AL033299|AL033300|AV026611|Gmk|Guk-1 guanylate kinase 1 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-4 chr11 86545002 86545253 + 0.518921928796332 NA promoter-TSS (NM_028259) promoter-TSS (NM_028259) 136 NM_001199046 56427 Mm.383207 NM_019756 ENSMUSG00000020513 Tubd1 4930550G19Rik|Tubd tubulin, delta 1 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332 chr1 151226509 151226841 + 0.518921928796332 NA Intergenic Intergenic 88641 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-8 chr7 90342301 90342651 + 0.518921928796332 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 40121 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_33_21_0.350399238699154_4.63463123798687_0.518921928796332-4 chr3 122244996 122245292 + 0.518921928796332 NA promoter-TSS (NM_008129) promoter-TSS (NM_008129) -413 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding unique_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-6 chr9 70656428 70656999 + 0.518921928796332 NA exon (NM_172772, exon 1 of 9) exon (NM_172772, exon 1 of 9) 461 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Mindy2 AI465301|B230380D07Rik|Fam63b|mKIAA1164 MINDY lysine 48 deubiquitinase 2 protein-coding unique_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-3 chrX 105069841 105070465 + 0.518921928796332 NA promoter-TSS (NR_015467) promoter-TSS (NR_015467) -29 NR_015467 71445 Mm.242968 NR_015467 ENSMUSG00000087174 5530601H04Rik AI835882 RIKEN cDNA 5530601H04 gene ncRNA common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-4 chr2 165492984 165493273 + 0.518921928796332 NA exon (NM_001007581, exon 1 of 2) exon (NM_001007581, exon 1 of 2) 186 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-10 chr7 144553254 144553542 + 0.518921928796332 NA intron (NM_001195086, intron 1 of 31) CpG 331 NM_001033319 233977 Mm.490347 NM_001033319 ENSMUSG00000037519 Ppfia1 C030014K08Rik|C87158|LIP.1|LIP1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 protein-coding unique_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-2 chr19 17225935 17226401 + 0.518921928796332 NA Intergenic Intergenic 113337 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-8 chr8 93982111 93982500 + 0.518921928796332 NA intron (NM_011787, intron 9 of 13) intron (NM_011787, intron 9 of 13) 30335 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-6 chr7 49476792 49477191 + 0.518921928796332 NA intron (NM_175272, intron 10 of 37) intron (NM_175272, intron 10 of 37) 159844 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-2 chr10 19082681 19082990 + 0.518921928796332 NA Intergenic Intergenic -58914 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_33_21_0.350399238699154_4.63463123798687_0.518921928796332-5 chr4 134286759 134287197 + 0.518921928796332 NA intron (NM_146156, intron 1 of 2) CpG 275 NM_001163794 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak2_33_21_0.350399238699154_4.63463123798687_0.518921928796332-5 chr5 115565327 115565742 + 0.518921928796332 NA intron (NM_172719, intron 1 of 57) CpG 271 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak2_33_21_0.350399238699154_4.63463123798687_0.518921928796332 chr1 183081838 183082159 + 0.518921928796332 NA Intergenic Intergenic 65559 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak2_25_28_-0.432442820672459_4.64175958479134_0.518921928796332-7 chr4 81672563 81673205 + 0.518921928796332 NA Intergenic Intergenic -185871 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA common_peak2_24_28_-0.48862715340202_4.61366741842656_0.518921928796332-9 chr7 67644782 67645179 + 0.518921928796332 NA intron (NR_028144, intron 1 of 8) intron (NR_028144, intron 1 of 8) 256 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak1_25_28_-0.432442820672459_4.64175958479134_0.518921928796332 chr1 176832947 176833706 + 0.518921928796332 NA intron (NM_001357390, intron 5 of 18) MIRb|SINE|MIR 2807 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak1_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-4 chr5 30950203 30950812 + 0.518746288394493 NA intron (NM_021304, intron 1 of 9) intron (NM_021304, intron 1 of 9) 401 NM_021304 57742 Mm.389615 NM_021304 ENSMUSG00000006638 Abhd1 LABH-1|LABH1 abhydrolase domain containing 1 protein-coding common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-4 chr4 108999936 109000473 + 0.518746288394493 NA promoter-TSS (NM_001347169) promoter-TSS (NM_001347169) -451 NM_001346554 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak1_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-6 chr7 5062268 5062674 + 0.518746288394493 NA intron (NM_001205231, intron 1 of 11) CpG 328 NM_001205231 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-2 chr15 27414405 27414719 + 0.518746288394493 NA Intergenic Intergenic -52115 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493 chr1 71944987 71945834 + 0.518746288394493 NA Intergenic Intergenic 57298 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_33_36_-0.399622508292499_5.0096421114827_0.518746288394493 chr11 101552924 101553285 + 0.518746288394493 NA intron (NM_008676, intron 1 of 23) intron (NM_008676, intron 1 of 23) 450 NM_001252223 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-5 chr7 65931634 65932179 + 0.518746288394493 NA intron (NM_011048, intron 6 of 21) intron (NM_011048, intron 6 of 21) 69770 NM_011048 18553 Mm.294007 NM_011048 ENSMUSG00000030513 Pcsk6 C86343|Pace4|SPC4|b2b2830Clo proprotein convertase subtilisin/kexin type 6 protein-coding common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-7 chrX 157598077 157598646 + 0.518746288394493 NA intron (NM_172307, intron 1 of 10) CpG 354 NM_172307 270669 Mm.37577 NM_172307 ENSMUSG00000046873 Mbtps2 9630032G22Rik|AI662535 membrane-bound transcription factor peptidase, site 2 protein-coding common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493 chr13 51852799 51853153 + 0.518746288394493 NA Intergenic Intergenic 6301 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-3 chr17 84956534 84956980 + 0.518746288394493 NA promoter-TSS (NM_001159497) promoter-TSS (NM_001159497) 16 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-2 chr16 35422844 35423215 + 0.518746288394493 NA intron (NM_028295, intron 10 of 16) intron (NM_028295, intron 10 of 16) -59111 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-3 chr19 53414355 53414827 + 0.518746288394493 NA Intergenic Intergenic -23957 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-5 chr6 146675575 146675948 + 0.518746288394493 NA Intergenic Intergenic 18543 NR_046277 74925 Mm.386304 NR_046277 ENSMUSG00000085238 4930479D17Rik - RIKEN cDNA 4930479D17 gene ncRNA common_peak2_33_36_-0.399622508292499_5.0096421114827_0.518746288394493-6 chr9 58131397 58131864 + 0.518746288394493 NA intron (NM_009291, intron 1 of 18) intron (NM_009291, intron 1 of 18) 2281 NM_009291 20897 Mm.10801 NM_009291 ENSMUSG00000032327 Stra6 AI891933 stimulated by retinoic acid gene 6 protein-coding common_peak1_43_28_0.321194407469489_5.01857819886232_0.518746288394487-5 chr7 120982589 120983176 + 0.518746288394487 NA promoter-TSS (NM_007672) promoter-TSS (NM_007672) 373 NM_028955 74466 Mm.189707 NM_028955 ENSMUSG00000030877 Mfsd13b 4933427G17Rik major facilitator superfamily domain containing 13B protein-coding common_peak1_43_28_0.321194407469489_5.01857819886232_0.518746288394487 chr15 7878625 7879125 + 0.518746288394487 NA intron (NM_001081402, intron 17 of 17) intron (NM_001081402, intron 17 of 17) 63325 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_43_28_0.321194407469489_5.01857819886232_0.518746288394487-4 chr2 35461713 35462235 + 0.518746288394487 NA promoter-TSS (NM_001145821) promoter-TSS (NM_001145821) -525 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_43_28_0.321194407469489_5.01857819886232_0.518746288394487-3 chr18 21001236 21001687 + 0.518746288394487 NA promoter-TSS (NM_001303011) promoter-TSS (NM_001303011) 161 NM_001303005 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak2_43_28_0.321194407469489_5.01857819886232_0.518746288394487-2 chr17 75808980 75809794 + 0.518746288394487 NA Intergenic Intergenic -51636 NR_033456 100043885 Mm.127562 NR_033456 Gm4710 - predicted gene 4710 ncRNA common_peak2_43_28_0.321194407469489_5.01857819886232_0.518746288394487-4 chr4 115088414 115088926 + 0.518746288394487 NA promoter-TSS (NM_001164558) promoter-TSS (NM_001164558) -38 NM_001164558 67182 Mm.30181 NM_026018 ENSMUSG00000028716 Pdzk1ip1 0610007F13Rik|2700030M23Rik|AU046042|Map17 PDZK1 interacting protein 1 protein-coding common_peak2_43_28_0.321194407469489_5.01857819886232_0.518746288394487-5 chr5 143235300 143235628 + 0.518746288394487 NA TTS (NR_040700) TTS (NR_040700) 301 NM_177681 231866 Mm.55211 NM_177681 ENSMUSG00000029587 Zfp12 C530015C18|Krox-7|Zfp-12|Znf12 zinc finger protein 12 protein-coding common_peak2_43_28_0.321194407469489_5.01857819886232_0.518746288394487-3 chr3 121291101 121291573 + 0.518746288394487 NA promoter-TSS (NM_024178) promoter-TSS (NM_024178) -403 NR_155539 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_43_28_0.321194407469489_5.01857819886232_0.518746288394487-2 chr16 24449580 24449961 + 0.518746288394487 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 1679 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_43_28_0.321194407469489_5.01857819886232_0.518746288394487 chr19 5808551 5809109 + 0.518746288394487 NA Intergenic Intergenic -6158 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_43_28_0.321194407469489_5.01857819886232_0.518746288394487 chr11 100472266 100472768 + 0.518746288394487 NA exon (NM_172565, exon 1 of 2) exon (NM_172565, exon 1 of 2) 265 NR_155072 217194 Mm.183320 NM_172565 ENSMUSG00000048732 Klhl11 BC011167 kelch-like 11 protein-coding common_peak1_54_36_0.289378935721989_5.35414283348995_0.51862626278861 chr13 50417617 50418231 + 0.51862626278861 NA promoter-TSS (NM_175401) promoter-TSS (NM_175401) 60 NR_154273 109082 Mm.18638 NM_175401 ENSMUSG00000037816 Fbxw17 1110064L07Rik|C85886 F-box and WD-40 domain protein 17 protein-coding common_peak2_43_45_-0.344386553459953_5.35136867932704_0.51862626278861 chr11 86625359 86626045 + 0.51862626278861 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -41544 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_43_45_-0.344386553459953_5.35136867932704_0.51862626278861-5 chr9 108508046 108508635 + 0.51862626278861 NA intron (NM_133794, intron 1 of 23) intron (NM_133794, intron 1 of 23) 335 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding common_peak2_43_45_-0.344386553459953_5.35136867932704_0.51862626278861-4 chr8 120901846 120902411 + 0.51862626278861 NA Intergenic Intergenic 163489 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_54_36_0.289378935721989_5.35414283348995_0.51862626278861 chr3 51196723 51197297 + 0.51862626278861 NA Intergenic PB1D7|SINE|Alu -27437 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_43_45_-0.344386553459953_5.35136867932704_0.51862626278861-3 chr7 89676763 89677446 + 0.51862626278861 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 44286 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_54_36_0.289378935721989_5.35414283348995_0.51862626278861-3 chr17 15705639 15706305 + 0.51862626278861 NA intron (NM_007690, intron 1 of 35) intron (NM_007690, intron 1 of 35) 1005 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak2_43_45_-0.344386553459953_5.35136867932704_0.51862626278861-2 chr12 31654332 31654917 + 0.51862626278861 NA promoter-TSS (NM_001163126) promoter-TSS (NM_001163126) 202 NM_028002 71916 Mm.62979 NM_028002 ENSMUSG00000020648 Dus4l 2310069P03Rik|2700089B10Rik|AI482040|Pp35 dihydrouridine synthase 4-like (S. cerevisiae) protein-coding common_peak1_43_45_-0.344386553459953_5.35136867932704_0.51862626278861 chr6 108705401 108705961 + 0.51862626278861 NA Intergenic Intergenic -44747 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_43_45_-0.344386553459953_5.35136867932704_0.51862626278861-2 chr6 120822296 120822718 + 0.51862626278861 NA intron (NM_007510, intron 1 of 8) CpG 191 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|Vma4|p31 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding common_peak1_43_45_-0.344386553459953_5.35136867932704_0.51862626278861-3 chr7 24387688 24388318 + 0.51862626278861 NA Intergenic ID4_|SINE|ID -11625 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_54_36_0.289378935721989_5.35414283348995_0.51862626278861-2 chr17 15704329 15704861 + 0.51862626278861 NA promoter-TSS (NM_007690) promoter-TSS (NM_007690) -372 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak1_54_55_-0.308522620706665_5.65309361170427_0.518540604135986-5 chr7 90129664 90130052 + 0.518540604135986 NA promoter-TSS (NM_146194) promoter-TSS (NM_146194) 78 NR_046007 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_54_55_-0.308522620706665_5.65309361170427_0.518540604135986 chr17 31312971 31313700 + 0.518540604135986 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 17111 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_54_55_-0.308522620706665_5.65309361170427_0.518540604135986-3 chr16 16870963 16871619 + 0.518540604135986 NA intron (NM_011624, intron 1 of 17) intron (NM_011624, intron 1 of 17) 555 NM_011624 21976 Mm.326089 NM_011624 ENSMUSG00000022779 Top3b - topoisomerase (DNA) III beta protein-coding common_peak1_54_55_-0.308522620706665_5.65309361170427_0.518540604135986-4 chr2 75658398 75658870 + 0.518540604135986 NA promoter-TSS (NM_198090) promoter-TSS (NM_198090) -625 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak2_54_55_-0.308522620706665_5.65309361170427_0.518540604135986-3 chr9 85616976 85617479 + 0.518540604135986 NA Intergenic Intergenic 132107 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding common_peak1_54_55_-0.308522620706665_5.65309361170427_0.518540604135986-2 chr15 87653787 87654524 + 0.518540604135986 NA intron (NM_134096, intron 1 of 3) intron (NM_134096, intron 1 of 3) 28925 NM_134096 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding common_peak2_54_55_-0.308522620706665_5.65309361170427_0.518540604135986-2 chr4 45408391 45409048 + 0.518540604135986 NA promoter-TSS (NM_001009949) promoter-TSS (NM_001009949) 47 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_54_55_-0.308522620706665_5.65309361170427_0.518540604135986 chr1 16103214 16103974 + 0.518540604135986 NA exon (NM_011291, exon 2 of 7) exon (NM_011291, exon 2 of 7) 839 NM_011291 19989 Mm.319659 NM_011291 ENSMUSG00000043716 Rpl7 Rpl7a|Surf-3 ribosomal protein L7 protein-coding common_peak2_66_45_0.257991061583374_5.6525574868487_0.518540604135974 chr2 26315529 26316265 + 0.518540604135974 NA intron (NM_001355575, intron 1 of 13) intron (NM_001355575, intron 1 of 13) 364 NM_153410 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding common_peak1_66_45_0.257991061583374_5.6525574868487_0.518540604135974-3 chr11 117654846 117655646 + 0.518540604135974 NA intron (NM_198022, intron 1 of 21) CpG 957 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding common_peak1_66_45_0.257991061583374_5.6525574868487_0.518540604135974-2 chr11 49086327 49087137 + 0.518540604135974 NA promoter-TSS (NM_001271676) promoter-TSS (NM_001271676) -285 NM_001271676 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_66_45_0.257991061583374_5.6525574868487_0.518540604135974 chr1 135283093 135284044 + 0.518540604135974 NA exon (NM_145417, exon 1 of 11) exon (NM_145417, exon 1 of 11) 516 NM_145417 215615 Mm.291048 NM_145417 ENSMUSG00000041926 Rnpep - arginyl aminopeptidase (aminopeptidase B) protein-coding common_peak2_79_55_0.228232061767582_5.92147095294139_0.518477330661964 chr12 108394041 108395334 + 0.518477330661964 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -15946 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_80_55_0.24602753107001_5.93036868759261_0.518477330661964 chr2 85048079 85048921 + 0.518477330661964 NA Intergenic CpG -1960 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak1_66_66_-0.284536172817385_5.92382110404908_0.518477330661964 chr2 72319624 72320186 + 0.518477330661964 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 34204 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-3 chr15 3905918 3906777 + 0.518477330661964 NA Intergenic Intergenic 73226 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak2_66_66_-0.284536172817385_5.92382110404908_0.518477330661964-4 chr7 28944950 28946081 + 0.518477330661964 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 16817 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-8 chr9 102736707 102737609 + 0.518477330661964 NA Intergenic Intergenic -2490 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-7 chr4 136441976 136442848 + 0.518477330661964 NA 5' UTR (NM_001285484, exon 2 of 2) 5' UTR (NM_001285484, exon 2 of 2) 17800 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_79_55_0.228232061767582_5.92147095294139_0.518477330661964-2 chr15 76899904 76900807 + 0.518477330661964 NA 5' UTR (NM_025536, exon 2 of 2) 5' UTR (NM_025536, exon 2 of 2) 414 NM_025536 66398 Mm.291716 NM_025536 ENSMUSG00000055041 Commd5 2310065H03Rik|AI854466|D15Ertd81e|Hcarg COMM domain containing 5 protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-5 chr19 47219112 47219734 + 0.518477330661964 NA intron (NM_021360, intron 1 of 5) intron (NM_021360, intron 1 of 5) -9420 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-6 chr3 107850018 107850642 + 0.518477330661964 NA Intergenic Intergenic -26900 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-4 chr17 75005711 75006575 + 0.518477330661964 NA exon (NM_019919, exon 1 of 34) exon (NM_019919, exon 1 of 34) 614 NM_019919 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_79_55_0.228232061767582_5.92147095294139_0.518477330661964-3 chr4 133595155 133596326 + 0.518477330661964 NA Intergenic Intergenic 6428 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak1_79_55_0.228232061767582_5.92147095294139_0.518477330661964-2 chr4 59579902 59580646 + 0.518477330661964 NA Intergenic Intergenic -1289 NM_001301367 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964 chr10 79908540 79909071 + 0.518477330661964 NA intron (NM_198107, intron 1 of 14) CpG 133 NM_001163276 216154 Mm.260089 NM_198107 ENSMUSG00000013833 Med16 95kDa|A630083L04|DRIP92|Thrap5|Trap95 mediator complex subunit 16 protein-coding common_peak1_80_55_0.24602753107001_5.93036868759261_0.518477330661964-2 chr11 8446957 8448149 + 0.518477330661964 NA intron (NM_001083587, intron 24 of 30) intron (NM_001083587, intron 24 of 30) 216982 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_66_66_-0.284536172817385_5.92382110404908_0.518477330661964-3 chr2 72319570 72320259 + 0.518477330661964 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 34213 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_66_66_-0.284536172817385_5.92382110404908_0.518477330661964-2 chr11 69368545 69369253 + 0.518477330661964 NA intron (NM_146019, intron 1 of 39) CpG 527 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak1_79_55_0.228232061767582_5.92147095294139_0.518477330661964 chr15 89089192 89090078 + 0.518477330661964 NA exon (NM_027905, exon 1 of 9) exon (NM_027905, exon 1 of 9) 597 NM_027905 223776 Mm.44763 NM_027905 ENSMUSG00000035757 Selenoo 1300018J18Rik|Selo selenoprotein O protein-coding common_peak2_66_66_-0.284536172817385_5.92382110404908_0.518477330661964 chr11 31560184 31561362 + 0.518477330661964 NA Intergenic Intergenic 111089 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_79_78_-0.268193764351917_6.16968386600114_0.518429265182087 chr7 65470046 65470928 + 0.518429265182087 NA Intergenic Intergenic -99243 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak2_94_66_0.215676183268009_6.17392728209178_0.518429265182087-2 chr9 58582438 58583779 + 0.518429265182087 NA intron (NR_151824, intron 1 of 7) intron (NR_151824, intron 1 of 7) 868 NM_001357751 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak1_94_66_0.215676183268009_6.17392728209178_0.518429265182087-2 chr9 67043282 67044521 + 0.518429265182087 NA promoter-TSS (NM_001164254) promoter-TSS (NM_001164254) -30 NM_001164256 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_80_78_-0.250398295049489_6.17858160065236_0.518429265182087-2 chrX 96107943 96109161 + 0.518429265182087 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 12507 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_94_66_0.215676183268009_6.17392728209178_0.518429265182087 chr15 89172550 89173435 + 0.518429265182087 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 959 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_79_78_-0.268193764351917_6.16968386600114_0.518429265182087-2 chr16 4879437 4880445 + 0.518429265182087 NA promoter-TSS (NM_145359) promoter-TSS (NM_145359) -90 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak1_80_78_-0.250398295049489_6.17858160065236_0.518429265182087 chrX 18162690 18163562 + 0.518429265182087 NA exon (NM_009483, exon 1 of 29) exon (NM_009483, exon 1 of 29) 551 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_94_66_0.215676183268009_6.17392728209178_0.518429265182087 chr4 62699737 62700675 + 0.518429265182087 NA intron (NM_134257, intron 13 of 15) intron (NM_134257, intron 13 of 15) 26232 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_79_78_-0.268193764351917_6.16968386600114_0.518429265182087 chr10 59899941 59900892 + 0.518429265182087 NA Intergenic (GTTTG)n|Simple_repeat|Simple_repeat 20825 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_94_91_-0.241796582331232_6.4026636648914_0.518391894242941-2 chr9 6666412 6667757 + 0.518391894242941 NA Intergenic B1_Mur4|SINE|Alu -400537 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_94_91_-0.241796582331232_6.4026636648914_0.518391894242941 chr12 110601508 110602214 + 0.518391894242941 NA intron (NM_030238, intron 1 of 76) CpG 466 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak2_110_78_0.20096061553455_6.40426105594438_0.518391894242941 chr11 109362875 109363662 + 0.518391894242941 NA non-coding (NR_038097, exon 1 of 2) non-coding (NR_038097, exon 1 of 2) 386 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 - predicted gene 11696 ncRNA common_peak1_110_78_0.20096061553455_6.40426105594438_0.518391894242941 chr12 111449658 111450812 + 0.518391894242941 NA intron (NM_009396, intron 8 of 11) intron (NM_009396, intron 8 of 11) 7574 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_110_78_0.20096061553455_6.40426105594438_0.518391894242941-2 chr8 94982504 94983721 + 0.518391894242941 NA intron (NM_001198894, intron 1 of 13) intron (NM_001198894, intron 1 of 13) -1287 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_94_91_-0.241796582331232_6.4026636648914_0.518391894242941 chr2 180710255 180711143 + 0.518391894242941 NA promoter-TSS (NM_177852) promoter-TSS (NM_177852) 371 NM_001289651 76425 Mm.41464 NM_029607 ENSMUSG00000027573 Gid8 2310003C23Rik|4833420G11Rik|AI451474|Twa1 GID complex subunit 8 protein-coding common_peak2_94_91_-0.241796582331232_6.4026636648914_0.518391894242941-2 chr2 37422101 37422979 + 0.518391894242941 NA intron (NM_001100591, intron 1 of 21) intron (NM_001100591, intron 1 of 21) 363 NM_001100591 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak2_127_91_0.18531314944105_6.61621853077754_0.518362263498028 chr16 32867459 32868760 + 0.518362263498028 NA exon (NM_001200038, exon 1 of 20) exon (NM_001200038, exon 1 of 20) 257 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak2_127_91_0.18531314944105_6.61621853077754_0.518362263498028-2 chr8 79293985 79294850 + 0.518362263498028 NA promoter-TSS (NR_045822) promoter-TSS (NR_045822) 539 NM_133823 109136 Mm.26510 NM_133823 ENSMUSG00000037022 Mmaa 2810018E08Rik|AI840684 methylmalonic aciduria (cobalamin deficiency) type A protein-coding common_peak2_127_91_0.18531314944105_6.61621853077754_0.518362263498028-3 chr8 123042523 123043249 + 0.518362263498028 NA promoter-TSS (NR_037865) promoter-TSS (NR_037865) 311 NR_045268 100503178 Mm.294938 NR_045268 ENSMUSG00000099881 2810013P06Rik - RIKEN cDNA 2810013P06 gene ncRNA common_peak1_128_120_-0.198840084410952_6.81944319506912_0.518338373061678 chr5 129020230 129021437 + 0.518338373061678 NA intron (NM_009391, intron 3 of 6) CpG-11569 677 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak2_127_120_-0.209988131776531_6.81386917138633_0.518338373061678 chr11 116108710 116110435 + 0.518338373061678 NA exon (NM_172570, exon 1 of 6) exon (NM_172570, exon 1 of 6) 663 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_127_120_-0.209988131776531_6.81386917138633_0.518338373061678 chr2 61711792 61712540 + 0.518338373061678 NA intron (NM_021526, intron 1 of 11) intron (NM_021526, intron 1 of 11) 472 NM_021526 59029 Mm.218198 NM_021526 ENSMUSG00000026914 Psmd14 2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 protein-coding common_peak2_128_120_-0.198840084410952_6.81944319506912_0.518338373061678 chr2 61711805 61712690 + 0.518338373061678 NA intron (NM_021526, intron 1 of 11) intron (NM_021526, intron 1 of 11) 553 NM_021526 59029 Mm.218198 NM_021526 ENSMUSG00000026914 Psmd14 2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 protein-coding common_peak1_146_105_0.179218311457066_6.81752961029173_0.518338373061653 chr7 3645187 3646097 + 0.518338373061653 NA intron (NM_146176, intron 1 of 17) CpG 373 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak2_146_105_0.179218311457066_6.81752961029173_0.518338373061653 chr4 132883456 132884806 + 0.518338373061653 NA intron (NM_133887, intron 1 of 8) CpG 327 NM_133887 100226 Mm.28237 NM_133887 ENSMUSG00000028879 Stx12 AI850350|AU041521|Stx13 syntaxin 12 protein-coding common_peak1_166_120_0.17100913475195_7.00436780465057_0.518318829874227 chr15 61239412 61241805 + 0.518318829874227 NA Intergenic Intergenic -319338 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak1_310_231_0.122629068879815_7.91929552956748_0.518252073702381 chr16 92697311 92699173 + 0.518252073702381 NA promoter-TSS (NM_009821) promoter-TSS (NM_009821) -913 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_259_191_0.139067633768104_7.65449631760521_0.517186124756634 chr19 21272292 21273581 + 0.517186124756634 NA intron (NM_009551, intron 1 of 5) CpG 658 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_167_154_-0.177699668401345_7.18727457107356_0.51680764822649-2 chr6 72549165 72550498 + 0.51680764822649 NA 5' UTR (NM_001271395, exon 1 of 10) 5' UTR (NM_001271395, exon 1 of 10) 184 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_167_154_-0.177699668401345_7.18727457107356_0.51680764822649 chr1 176812660 176814627 + 0.51680764822649 NA Intergenic CpG -1017 NR_151682 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak1_147_137_-0.191673674867215_7.01268761934456_0.51663224717598 chr11 72846016 72847817 + 0.51663224717598 NA intron (NM_001045536, intron 11 of 54) intron (NM_001045536, intron 11 of 54) 50690 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak2_147_106_0.175383795509807_6.82915888415605_0.516420954904897-3 chr7 145111030 145112104 + 0.516420954904897 NA Intergenic Intergenic 96552 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_147_106_0.175383795509807_6.82915888415605_0.516420954904897-2 chr7 65978369 65979554 + 0.516420954904897 NA intron (NM_011048, intron 11 of 21) intron (NM_011048, intron 11 of 21) -81375 NR_152094 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak2_147_106_0.175383795509807_6.82915888415605_0.516420954904897 chr7 3645202 3646133 + 0.516420954904897 NA intron (NM_146176, intron 1 of 17) CpG 398 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak2_403_354_-0.11628727428112_8.41353157725148_0.516319017339971 chr2 126674238 126677297 + 0.516319017339971 NA promoter-TSS (NM_010249) promoter-TSS (NM_010249) -175 NR_073183 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak2_129_92_0.191926302954473_6.63512196258527_0.516163299205869 chr10 117375943 117376897 + 0.516163299205869 NA intron (NM_001013391, intron 1 of 9) CpG 553 NM_001013391 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak1_111_106_-0.22387785175571_6.62952806052329_0.516163299205869 chr4 88933616 88935435 + 0.516163299205869 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 7517 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak2_111_106_-0.22387785175571_6.62952806052329_0.516163299205869-2 chr19 56396952 56398186 + 0.516163299205869 NA intron (NM_007611, intron 1 of 6) intron (NM_007611, intron 1 of 6) 440 NM_007611 12369 Mm.35687 NM_007611 ENSMUSG00000025076 Casp7 AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7 caspase 7 protein-coding common_peak1_112_106_-0.211144284740895_6.6358948440307_0.516163299205869 chr2 23039054 23040071 + 0.516163299205869 NA intron (NM_001077190, intron 1 of 10) CpG 679 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak2_111_106_-0.22387785175571_6.62952806052329_0.516163299205869 chr13 98316395 98317730 + 0.516163299205869 NA promoter-TSS (NM_001170540) promoter-TSS (NM_001170540) -54 NR_137279 105246056 Mm.256021 NR_137279 ENSMUSG00000048603 Gm9828 - predicted gene 9828 ncRNA common_peak2_260_192_0.137072208990852_7.66099314176351_0.516115167204622 chr11 73176097 73178496 + 0.516115167204622 NA promoter-TSS (NM_025318) promoter-TSS (NM_025318) 213 NM_029564 76281 Mm.371656 NM_029564 ENSMUSG00000040158 Tax1bp3 1300011C24Rik|TIP-1 Tax1 (human T cell leukemia virus type I) binding protein 3 protein-coding common_peak2_619_470_0.0893582499741452_8.92426237459986_0.515977433993966 chr3 68492320 68496709 + 0.515977433993966 NA intron (NM_001282044, intron 1 of 7) CpG 333 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_95_92_-0.242393123809268_6.4179622492034_0.515844704882417 chr17 25539925 25540892 + 0.515844704882417 NA Intergenic Intergenic 21819 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA common_peak2_112_79_0.208394606772889_6.42612539827381_0.515844704882417 chr19 28989947 28990871 + 0.515844704882417 NA promoter-TSS (NM_001302443) promoter-TSS (NM_001302443) 57 NM_025950 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding common_peak2_111_79_0.195661039758074_6.4197586147664_0.515844704882417 chr10 71123814 71124874 + 0.515844704882417 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 35346 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_111_79_0.195661039758074_6.4197586147664_0.515844704882417 chr12 79172147 79172755 + 0.515844704882417 NA promoter-TSS (NM_016800) promoter-TSS (NM_016800) 7 NM_016800 53612 Mm.265929 NM_016800 ENSMUSG00000021124 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding common_peak2_111_79_0.195661039758074_6.4197586147664_0.515844704882417-2 chr14 28504248 28505301 + 0.515844704882417 NA promoter-TSS (NM_009524) promoter-TSS (NM_009524) -699 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_96_92_-0.227548256696953_6.42538468275955_0.515844704882417 chr11 70199522 70201112 + 0.515844704882417 NA Intergenic Intergenic -13593 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_111_79_0.195661039758074_6.4197586147664_0.515844704882417-2 chr15 99125488 99126730 + 0.515844704882417 NA promoter-TSS (NM_139140) promoter-TSS (NM_139140) -736 NM_139140 72572 Mm.276650 NM_139140 ENSMUSG00000051934 Spats2 2700012F11Rik|59kDa|Scr59|p59 spermatogenesis associated, serine-rich 2 protein-coding common_peak1_189_173_-0.16823310169619_7.35882694500063_0.515636893695902 chr2 173266735 173268120 + 0.515636893695902 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 9106 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_95_67_0.209302846048423_6.19211426427455_0.515444410977657 chr3 88409836 88410945 + 0.515444410977657 NA promoter-TSS (NM_025928) promoter-TSS (NM_025928) 7 NM_001310605 67037 Mm.36715 NM_025928 ENSMUSG00000028066 Pmf1 2600009M07Rik|AL033286|AW060657 polyamine-modulated factor 1 protein-coding common_peak1_81_79_-0.250968527286925_6.1964438312439_0.515444410977657 chr2 113847820 113848936 + 0.515444410977657 NA 5' UTR (NM_181416, exon 1 of 12) 5' UTR (NM_181416, exon 1 of 12) 283 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding common_peak2_81_79_-0.250968527286925_6.1964438312439_0.515444410977657-2 chrX 96107928 96109208 + 0.515444410977657 NA intron (NM_010833, intron 1 of 12) MIR3|SINE|MIR 12523 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_95_67_0.209302846048423_6.19211426427455_0.515444410977657-4 chr8 120971961 120972677 + 0.515444410977657 NA Intergenic Intergenic 110791 NR_045471 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA common_peak1_95_67_0.209302846048423_6.19211426427455_0.515444410977657-2 chr5 110652912 110653909 + 0.515444410977657 NA promoter-TSS (NM_027156) promoter-TSS (NM_027156) -28 NM_153570 100608 Mm.29960 NM_153570 ENSMUSG00000033294 Noc4l AI326906 NOC4 like protein-coding common_peak2_81_79_-0.250968527286925_6.1964438312439_0.515444410977657 chr10 21296027 21297117 + 0.515444410977657 NA intron (NM_019702, intron 1 of 17) CpG 593 NM_001145209 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak2_95_67_0.209302846048423_6.19211426427455_0.515444410977657 chr15 53114549 53115409 + 0.515444410977657 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 231204 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_95_67_0.209302846048423_6.19211426427455_0.515444410977657-3 chr5 135393866 135394527 + 0.515444410977657 NA exon (NM_148932, exon 1 of 13) exon (NM_148932, exon 1 of 13) 350 NM_148932 107939 Mm.28399 NM_148932 ENSMUSG00000053293 Pom121 2610027A18Rik|C80273|mKIAA0618 nuclear pore membrane protein 121 protein-coding common_peak2_81_56_0.238069553435697_5.95192479088259_0.514932048590334-4 chr6 119848309 119848968 + 0.514932048590334 NA promoter-TSS (NM_053204) promoter-TSS (NM_053204) 445 NR_030776 67289 Mm.418299 NR_030776 3110021A11Rik - RIKEN cDNA 3110021A11 gene ncRNA common_peak2_67_67_-0.284686963487132_5.94511935950677_0.514932048590334 chr16 24427261 24428044 + 0.514932048590334 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -20439 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_81_56_0.238069553435697_5.95192479088259_0.514932048590334-5 chr7 81213347 81214115 + 0.514932048590334 NA promoter-TSS (NM_008803) promoter-TSS (NM_008803) -73 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding common_peak1_81_56_0.238069553435697_5.95192479088259_0.514932048590334-4 chr5 105777425 105778821 + 0.514932048590334 NA intron (NM_001122768, intron 2 of 2) ID4|SINE|ID 77313 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_81_56_0.238069553435697_5.95192479088259_0.514932048590334-3 chr12 72085928 72086881 + 0.514932048590334 NA intron (NM_001205067, intron 1 of 6) intron (NM_001205067, intron 1 of 6) 565 NM_024205 104771 Mm.258935 NM_024205 ENSMUSG00000005078 Jkamp 1200003C05Rik|2310047L11Rik|Jamp JNK1/MAPK8-associated membrane protein protein-coding common_peak2_67_67_-0.284686963487132_5.94511935950677_0.514932048590334-2 chr5 77371754 77372891 + 0.514932048590334 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 35723 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_81_56_0.238069553435697_5.95192479088259_0.514932048590334 chr11 86484701 86485439 + 0.514932048590334 NA intron (NM_029788, intron 1 of 8) CpG 413 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding common_peak1_81_56_0.238069553435697_5.95192479088259_0.514932048590334-2 chr1 74008593 74009863 + 0.514932048590334 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 115219 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_81_56_0.238069553435697_5.95192479088259_0.514932048590334 chr1 36709537 36710145 + 0.514932048590334 NA promoter-TSS (NM_146107) promoter-TSS (NM_146107) 84 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding common_peak2_81_56_0.238069553435697_5.95192479088259_0.514932048590334-2 chr15 84191895 84192624 + 0.514932048590334 NA promoter-TSS (NM_178614) promoter-TSS (NM_178614) 26 NM_178614 68653 Mm.290725 NM_178614 ENSMUSG00000022437 Samm50 1110030L07Rik SAMM50 sorting and assembly machinery component protein-coding common_peak2_81_56_0.238069553435697_5.95192479088259_0.514932048590334-3 chr19 6014535 6015316 + 0.514932048590334 NA non-coding (NR_045783, exon 3 of 5) non-coding (NR_045783, exon 3 of 5) 322 NM_007600 12333 Mm.6221 NM_007600 ENSMUSG00000024942 Capn1 Capa-1|Capa1|mu-calpin calpain 1 protein-coding common_peak2_236_174_0.140137177097158_7.52127970038091_0.514722663500978 chr15 81188644 81190763 + 0.514722663500978 NA intron (NM_001082536, intron 1 of 13) intron (NM_001082536, intron 1 of 13) 1054 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak1_149_107_0.181191982643051_6.84548349348499_0.514537101518018-2 chr8 120537485 120538704 + 0.514537101518018 NA promoter-TSS (NR_106159) promoter-TSS (NR_106159) -368 NR_151732 74227 Mm.334856 NR_151732 ENSMUSG00000102737 1700016A09Rik - RIKEN cDNA 1700016A09 gene ncRNA common_peak1_149_107_0.181191982643051_6.84548349348499_0.514537101518018 chr12 55229761 55231319 + 0.514537101518018 NA promoter-TSS (NM_001100110) promoter-TSS (NM_001100110) 62 NM_001100110 100101806 Mm.471968 NM_001100110 ENSMUSG00000079108 Srp54c E330029E12Rik signal recognition particle 54C protein-coding common_peak1_190_174_-0.168980926885312_7.36672064838967_0.514334949543366 chr8 123504819 123506664 + 0.514334949543366 NA TTS (NM_001170975) TTS (NM_001170975) 9714 NM_001170975 72185 Mm.27925 NM_028146 ENSMUSG00000031970 Dbndd1 2810427I04Rik|D8Ertd590e dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding common_peak2_190_174_-0.168980926885312_7.36672064838967_0.514334949543366 chr13 98925763 98926924 + 0.514334949543366 NA promoter-TSS (NM_178716) promoter-TSS (NM_178716) 41 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_55_56_-0.308245899946061_5.67876706419171_0.514261803374139 chr13 112772334 112772966 + 0.514261803374139 NA Intergenic Intergenic -28127 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak1_55_56_-0.308245899946061_5.67876706419171_0.514261803374139-3 chr7 5038171 5038938 + 0.514261803374139 NA promoter-TSS (NM_001039532) promoter-TSS (NM_001039532) -108 NM_001039532 654801 Mm.333548 NM_001039532 ENSMUSG00000043290 Zfp784 C730049F21Rik|Znf784 zinc finger protein 784 protein-coding common_peak1_67_46_0.24818702608557_5.67868236472042_0.514261803374139-3 chr9 108783879 108784469 + 0.514261803374139 NA Intergenic Intergenic -11820 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak1_67_46_0.24818702608557_5.67868236472042_0.514261803374139 chr10 95232940 95233477 + 0.514261803374139 NA intron (NM_001330138, intron 2 of 2) intron (NM_001330138, intron 2 of 2) -87383 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak2_55_56_-0.308245899946061_5.67876706419171_0.514261803374139 chr11 96295771 96296926 + 0.514261803374139 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -2726 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak1_67_46_0.24818702608557_5.67868236472042_0.514261803374139-2 chr7 122066651 122067083 + 0.514261803374139 NA promoter-TSS (NM_138589) promoter-TSS (NM_138589) 219 NM_026140 67417 Mm.45171 NM_026140 ENSMUSG00000030871 Ears2 3230401I01Rik|mKIAA1970 glutamyl-tRNA synthetase 2, mitochondrial protein-coding common_peak1_55_56_-0.308245899946061_5.67876706419171_0.514261803374139-2 chr14 20347461 20348053 + 0.514261803374139 NA promoter-TSS (NM_001360365) promoter-TSS (NM_001360365) 364 NM_027475 70601 Mm.35105 NM_027475 ENSMUSG00000021810 Ecd 5730461K03Rik|Hsgt1 ecdysoneless cell cycle regulator protein-coding common_peak2_67_46_0.24818702608557_5.67868236472042_0.514261803374139 chr1 130717528 130718102 + 0.514261803374139 NA intron (NM_178691, intron 1 of 1) CpG 488 NM_178691 226418 Mm.106553 NM_178691 ENSMUSG00000046404 Yod1 6330564D18Rik|9930028C20Rik|Hshin7 YOD1 deubiquitinase protein-coding common_peak2_55_56_-0.308245899946061_5.67876706419171_0.514261803374139-3 chr4 134930984 134931654 + 0.514261803374139 NA intron (NM_026780, intron 2 of 6) CpG-10479 339 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak2_55_56_-0.308245899946061_5.67876706419171_0.514261803374139-4 chr4 141790068 141790729 + 0.514261803374139 NA intron (NM_172338, intron 1 of 14) CpG 246 NM_172338 214063 Mm.39102 NM_172338 ENSMUSG00000040697 Dnajc16 2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962 DnaJ heat shock protein family (Hsp40) member C16 protein-coding common_peak2_55_56_-0.308245899946061_5.67876706419171_0.514261803374139-2 chr4 88784910 88785478 + 0.514261803374139 NA 5' UTR (NM_001085532, exon 1 of 1) 5' UTR (NM_001085532, exon 1 of 1) 140 NM_001085532 545649 Mm.474424 NM_001085532 ENSMUSG00000099545 Gm13276 - predicted gene 13276 protein-coding common_peak1_113_107_-0.211943424964112_6.64891578968141_0.51400842349742 chr11 95078488 95080213 + 0.51400842349742 NA Intergenic Intergenic -2539 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_113_107_-0.211943424964112_6.64891578968141_0.51400842349742 chr18 9449011 9450110 + 0.51400842349742 NA exon (NM_026484, exon 1 of 10) exon (NM_026484, exon 1 of 10) 594 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak2_130_93_0.187473456764753_6.64832558006001_0.514008423497395 chr3 37937475 37938213 + 0.514008423497395 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 39031 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_130_93_0.187473456764753_6.64832558006001_0.514008423497395 chr2 173256345 173257483 + 0.514008423497395 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 19619 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_347_259_0.11927085142978_8.08200323874334_0.513424670327715 chr8 108714143 108716457 + 0.513424670327715 NA 5' UTR (NM_007496, exon 1 of 10) 5' UTR (NM_007496, exon 1 of 10) 656 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488-6 chr7 49330515 49331033 + 0.513362016391488 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 84585 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-7 chr19 6969336 6969761 + 0.513362016391488 NA exon (NM_008874, exon 1 of 31) exon (NM_008874, exon 1 of 31) 266 NM_008874 18797 Mm.273204 NM_008874 ENSMUSG00000024960 Plcb3 mKIAA4098 phospholipase C, beta 3 protein-coding common_peak2_55_37_0.276716600775095_5.38628581383113_0.513362016391488-2 chr5 115506791 115507123 + 0.513362016391488 NA intron (NM_011223, intron 1 of 10) CpG 281 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488-3 chr15 102135651 102136191 + 0.513362016391488 NA intron (NM_001033277, intron 1 of 10) CpG 294 NM_001033277 223918 Mm.385009 NM_001033277 ENSMUSG00000036966 Spryd3 BC008150 SPRY domain containing 3 protein-coding common_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488 chr10 68136770 68137352 + 0.513362016391488 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 141665 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-4 chr11 88718518 88719183 + 0.513362016391488 NA promoter-TSS (NM_001201341) promoter-TSS (NM_001201341) 207 NR_038058 193280 Mm.396842 NR_038058 C030037D09Rik 9330160M04 RIKEN cDNA C030037D09 gene ncRNA common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-6 chr17 20944678 20945122 + 0.513362016391488 NA promoter-TSS (NM_016891) promoter-TSS (NM_016891) -554 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding common_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488-4 chr19 45017151 45017718 + 0.513362016391488 NA promoter-TSS (NM_001130526) promoter-TSS (NM_001130526) -701 NM_001130526 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak2_55_37_0.276716600775095_5.38628581383113_0.513362016391488 chr13 45389819 45390574 + 0.513362016391488 NA intron (NM_153789, intron 1 of 6) CpG 454 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488 chr1 92214915 92215379 + 0.513362016391488 NA Intergenic Intergenic -34806 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_44_46_-0.343220704251054_5.38297849955211_0.513362016391488 chr10 75212046 75212642 + 0.513362016391488 NA promoter-TSS (NM_001145826) promoter-TSS (NM_001145826) -46 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-2 chr10 78008971 78009719 + 0.513362016391488 NA intron (NM_001358793, intron 1 of 21) CpG 462 NM_008826 18641 Mm.269649 NM_008826 ENSMUSG00000020277 Pfkl AA407869|ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver, B-type protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-8 chr5 138619239 138619748 + 0.513362016391488 NA intron (NM_013844, intron 1 of 5) CpG 250 NM_001163797 24135 Mm.27575 NM_013844 ENSMUSG00000058291 Zfp68 KRAB3|KRAZ2|Zfp70|mszf22|mszf49 zinc finger protein 68 protein-coding common_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488-5 chr2 157204258 157205095 + 0.513362016391488 NA promoter-TSS (NM_001139516) promoter-TSS (NM_001139516) -142 NM_001139516 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 RB transcriptional corepressor like 1 protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-5 chr16 4885762 4886456 + 0.513362016391488 NA promoter-TSS (NM_001357061) promoter-TSS (NM_001357061) 9 NM_001357061 17237 Mm.291326 NM_029657 ENSMUSG00000022517 Mgrn1 2610042J20Rik|mKIAA0544|md|nc mahogunin, ring finger 1 protein-coding common_peak2_55_37_0.276716600775095_5.38628581383113_0.513362016391488-3 chr7 128309795 128310268 + 0.513362016391488 NA Intergenic Intergenic -11900 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-9 chr7 24387635 24388299 + 0.513362016391488 NA Intergenic Intergenic -11661 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488 chr1 132328392 132329226 + 0.513362016391488 NA intron (NM_001195025, intron 5 of 7) intron (NM_001195025, intron 5 of 7) 12684 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_55_37_0.276716600775095_5.38628581383113_0.513362016391488-2 chr11 88552886 88553761 + 0.513362016391488 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -65928 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-2 chr3 103791435 103791998 + 0.513362016391488 NA promoter-TSS (NM_001301306) promoter-TSS (NM_001301306) -153 NM_001301304 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_44_46_-0.343220704251054_5.38297849955211_0.513362016391488-3 chr11 5064694 5065547 + 0.513362016391488 NA intron (NM_030228, intron 1 of 6) CpG 207 NM_144560 78926 Mm.44591 NM_030228 ENSMUSG00000034201 Gas2l1 4930500E24Rik|D0Jmb1|Gar22|TU-71.1 growth arrest-specific 2 like 1 protein-coding common_peak1_97_93_-0.228285687884827_6.44044600773522_0.513356579122551 chr14 20702076 20703473 + 0.513356579122551 NA promoter-TSS (NM_025366) promoter-TSS (NM_025366) -253 NM_025366 66121 Mm.246996 NM_025366 ENSMUSG00000063787 Chchd1 1110001O19Rik|2400010G13Rik|MRP-S37 coiled-coil-helix-coiled-coil-helix domain containing 1 protein-coding common_peak2_97_93_-0.228285687884827_6.44044600773522_0.513356579122551-2 chr8 124231564 124232725 + 0.513356579122551 NA intron (NM_139272, intron 1 of 15) CpG 750 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_97_93_-0.228285687884827_6.44044600773522_0.513356579122551 chr5 121204571 121205694 + 0.513356579122551 NA intron (NM_011290, intron 1 of 6) intron (NM_011290, intron 1 of 6) 631 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak1_263_195_0.131191201562819_7.68030544489662_0.512965060350671 chr8 78508092 78510021 + 0.512965060350671 NA promoter-TSS (NM_009033) promoter-TSS (NM_009033) -128 NM_009033 19656 Mm.24718 NM_009033 ENSMUSG00000037070 Rbmxl1 Hnrpg|Rbmx|Rbmxrt RNA binding motif protein, X-linked like-1 protein-coding common_peak1_131_123_-0.201240285135605_6.85357616781907_0.512685938594891 chr1 136228659 136229585 + 0.512685938594891 NA intron (NM_028872, intron 1 of 9) intron (NM_028872, intron 1 of 9) 5158 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding common_peak2_97_68_0.217778707014642_6.21741381028549_0.512540498859089-4 chr8 107055996 107056674 + 0.512540498859089 NA promoter-TSS (NM_001164472) promoter-TSS (NM_001164472) 402 NM_139229 97484 Mm.288641 NM_139229 ENSMUSG00000031916 Cog8 BB235941|C87832 component of oligomeric golgi complex 8 protein-coding common_peak2_82_80_-0.251526381993706_6.21408681188777_0.512540498859089-3 chr2 130273717 130274266 + 0.512540498859089 NA promoter-TSS (NM_024193) promoter-TSS (NM_024193) -421 NM_024193 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak2_82_80_-0.251526381993706_6.21408681188777_0.512540498859089-2 chr16 56036606 56038132 + 0.512540498859089 NA intron (NM_029092, intron 1 of 1) AT_rich|Low_complexity|Low_complexity 405 NM_029092 52575 Mm.288742 NM_029092 ENSMUSG00000044763 Trmt10c 1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1 tRNA methyltransferase 10C protein-coding common_peak1_82_80_-0.251526381993706_6.21408681188777_0.512540498859089-2 chr6 67267078 67267868 + 0.512540498859089 NA intron (NM_001113565, intron 1 of 7) CpG 494 NM_025814 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding common_peak2_82_80_-0.251526381993706_6.21408681188777_0.512540498859089 chr12 21285536 21286706 + 0.512540498859089 NA promoter-TSS (NM_018813) promoter-TSS (NM_018813) 163 NM_008403 16413 Mm.273333 NM_008403 ENSMUSG00000062352 Itgb1bp1 AI449260|AU019480|Icap1 integrin beta 1 binding protein 1 protein-coding common_peak2_97_68_0.217778707014642_6.21741381028549_0.512540498859089-3 chr17 56584989 56585710 + 0.512540498859089 NA promoter-TSS (NM_001355463) promoter-TSS (NM_001355463) 367 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding common_peak2_97_68_0.217778707014642_6.21741381028549_0.512540498859089-2 chr11 97703455 97704267 + 0.512540498859089 NA exon (NM_011971, exon 2 of 6) exon (NM_011971, exon 2 of 6) 427 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak2_97_68_0.217778707014642_6.21741381028549_0.512540498859089 chr1 130733951 130734478 + 0.512540498859089 NA intron (NM_177604, intron 1 of 3) intron (NM_177604, intron 1 of 3) 2238 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak1_82_80_-0.251526381993706_6.21408681188777_0.512540498859089 chr4 21930962 21932124 + 0.512540498859089 NA 5' UTR (NM_175234, exon 1 of 6) 5' UTR (NM_175234, exon 1 of 6) 217 NM_175234 76132 Mm.159689 NM_175234 ENSMUSG00000028246 Faxc 6230409E13Rik|AW742931 failed axon connections homolog protein-coding common_peak2_292_260_-0.132703021852516_7.96155448564363_0.512141393849964 chr2 157422969 157425796 + 0.512141393849964 NA promoter-TSS (NM_009271) promoter-TSS (NM_009271) 89 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak1_34_37_-0.396571520897782_5.04964175299469_0.512115693271959 chr3 30995433 30995683 + 0.512115693271959 NA promoter-TSS (NM_008857) promoter-TSS (NM_008857) -213 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-7 chr8 126832003 126832687 + 0.512115693271959 NA Intergenic Intergenic -16675 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959 chr11 120630130 120630846 + 0.512115693271959 NA intron (NM_010756, intron 1 of 2) intron (NM_010756, intron 1 of 2) 3059 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding unique_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959 chr11 51944973 51945540 + 0.512115693271959 NA Intergenic Intergenic -22375 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-6 chr8 110965181 110965682 + 0.512115693271959 NA intron (NM_009179, intron 3 of 6) intron (NM_009179, intron 3 of 6) 32392 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding unique_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-2 chr3 145798144 145798857 + 0.512115693271959 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 39808 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-4 chr14 46635642 46636252 + 0.512115693271959 NA intron (NR_046460, intron 1 of 4) PB1D11|SINE|Alu 1476 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA common_peak2_34_37_-0.396571520897782_5.04964175299469_0.512115693271959-3 chr6 88936296 88936799 + 0.512115693271959 NA Intergenic Charlie7|DNA|hAT-Charlie 34296 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_44_29_0.304477551818065_5.05912937151755_0.512115693271959-3 chr8 45710130 45710603 + 0.512115693271959 NA intron (NM_001310708, intron 1 of 19) intron (NM_001310708, intron 1 of 19) 48373 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_34_37_-0.396571520897782_5.04964175299469_0.512115693271959 chr4 64084231 64084816 + 0.512115693271959 NA Intergenic MIR|SINE|MIR -37508 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-2 chr12 101957840 101958148 + 0.512115693271959 NA intron (NM_029705, intron 1 of 10) CpG 249 NM_029705 110616 Mm.271914 NM_029705 ENSMUSG00000021189 Atxn3 2210008M02Rik|AI463012|AI647473|ATX3|MJD1|Mjd|Sca3|ataxin-3 ataxin 3 protein-coding common_peak2_34_37_-0.396571520897782_5.04964175299469_0.512115693271959-4 chr9 103201216 103201958 + 0.512115693271959 NA intron (NM_009275, intron 1 of 6) intron (NM_009275, intron 1 of 6) 478 NM_009275 20818 Mm.273053 NM_009275 ENSMUSG00000032553 Srprb AA409543 signal recognition particle receptor, B subunit protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-5 chr7 110796995 110797380 + 0.512115693271959 NA intron (NM_009667, intron 6 of 14) intron (NM_009667, intron 6 of 14) 24583 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_44_29_0.304477551818065_5.05912937151755_0.512115693271959 chr15 62080147 62080637 + 0.512115693271959 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 41135 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_34_37_-0.396571520897782_5.04964175299469_0.512115693271959-2 chr4 155784158 155784855 + 0.512115693271959 NA exon (NM_001033394, exon 2 of 2) exon (NM_001033394, exon 2 of 2) 1368 NM_001033394 320587 Mm.384382 NM_001033394 ENSMUSG00000073680 Tmem88b A230069A22Rik transmembrane protein 88B protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-8 chr9 26999839 27000799 + 0.512115693271959 NA promoter-TSS (NM_025862) promoter-TSS (NM_025862) 642 NM_001326361 77862 Mm.16925 NM_144543 ENSMUSG00000035443 Thyn1 D730042P09Rik|HSPC144|MDS012|MY105|Thy28 thymocyte nuclear protein 1 protein-coding common_peak1_44_29_0.304477551818065_5.05912937151755_0.512115693271959-3 chr12 110066294 110067135 + 0.512115693271959 NA Intergenic Intergenic 91359 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak2_44_29_0.304477551818065_5.05912937151755_0.512115693271959-2 chr6 145441647 145442163 + 0.512115693271959 NA Intergenic Intergenic -6980 NM_028742 74071 Mm.441497 NM_028742 ENSMUSG00000054966 Lmntd1 4933403M22Rik|AI482300|Ifltd1|Lmna-rs1|Lmna1 lamin tail domain containing 1 protein-coding common_peak1_131_94_0.183100416920322_6.66140581679111_0.511896322532404 chr1 82724721 82725991 + 0.511896322532404 NA intron (NM_001310695, intron 1 of 7) intron (NM_001310695, intron 1 of 7) 466 NM_001310695 75734 Mm.396863 NM_029409 ENSMUSG00000026150 Mff 5230400G24Rik|AI314724 mitochondrial fission factor protein-coding common_peak2_171_124_0.166348286400857_7.04895842786252_0.511726112390116 chr8 127063659 127065189 + 0.511726112390116 NA exon (NM_001309391, exon 1 of 25) exon (NM_001309391, exon 1 of 25) 368 NM_001309391 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak1_68_68_-0.28483555275446_5.96610668040094_0.511500665010653 chr4 126259728 126260262 + 0.511500665010653 NA Intergenic Intergenic -2410 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak2_69_68_-0.26422344380561_5.97641273487536_0.511500665010653 chr15 87653615 87654591 + 0.511500665010653 NA intron (NM_134096, intron 1 of 3) intron (NM_134096, intron 1 of 3) 28873 NM_134096 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding common_peak2_69_68_-0.26422344380561_5.97641273487536_0.511500665010653-2 chr17 33824181 33824895 + 0.511500665010653 NA promoter-TSS (NR_103515) promoter-TSS (NR_103515) 24 NM_016844 54127 Mm.352374 NM_016844 ENSMUSG00000067288 Rps28 - ribosomal protein S28 protein-coding common_peak1_69_68_-0.26422344380561_5.97641273487536_0.511500665010653 chr4 6365421 6366062 + 0.511500665010653 NA promoter-TSS (NM_016807) promoter-TSS (NM_016807) 61 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak1_82_57_0.230342625763346_5.97315230800925_0.511500665010641-2 chr16 57671931 57672792 + 0.511500665010641 NA intron (NM_007739, intron 2 of 3) intron (NM_007739, intron 2 of 3) -65494 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak2_82_57_0.230342625763346_5.97315230800925_0.511500665010641-2 chr5 138186750 138187712 + 0.511500665010641 NA promoter-TSS (NM_178612) promoter-TSS (NM_178612) -5 NM_001356600 21343 Mm.248517 NM_009315 ENSMUSG00000036980 Taf6 80kDa|AW549759|TAF(II)80|TAFII70|Taf2e|p80 TATA-box binding protein associated factor 6 protein-coding common_peak2_82_57_0.230342625763346_5.97315230800925_0.511500665010641 chr11 61174104 61174967 + 0.511500665010641 NA intron (NM_001004143, intron 1 of 12) intron (NM_001004143, intron 1 of 12) 524 NM_001004143 216825 Mm.30602 NM_001004143 ENSMUSG00000042506 Usp22 AI427806 ubiquitin specific peptidase 22 protein-coding common_peak1_82_57_0.230342625763346_5.97315230800925_0.511500665010641 chr16 33890997 33892060 + 0.511500665010641 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 61863 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_381_335_-0.117142217404988_8.33374631407627_0.511496705151748 chr1 155096118 155099405 + 0.511496705151748 NA 3' UTR (NM_010500, exon 1 of 1) 3' UTR (NM_010500, exon 1 of 1) 1875 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_172_158_-0.172445915417501_7.22665999757561_0.511028013397119 chr8 94666715 94667565 + 0.511028013397119 NA promoter-TSS (NM_024269) promoter-TSS (NM_024269) 49 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak2_951_806_-0.0731548746601778_9.61984742594769_0.511020332447591 chr11 86578678 86586842 + 0.511020332447591 NA Intergenic URR1B|DNA|hAT-Charlie 1398 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_114_81_0.197903216358805_6.45650361279749_0.510925484301437-2 chr3 105704631 105706037 + 0.510925484301437 NA promoter-TSS (NM_001163356) promoter-TSS (NM_001163356) -124 NM_001163356 109050 Mm.212591 NM_175398 ENSMUSG00000048458 Fam212b 6530418L21Rik|inka2 family with sequence similarity 212, member B protein-coding common_peak1_98_94_-0.229009001278979_6.45535110769146_0.510925484301437 chr18 12128769 12130065 + 0.510925484301437 NA intron (NM_024182, intron 1 of 12) intron (NM_024182, intron 1 of 12) 567 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding common_peak1_98_94_-0.229009001278979_6.45535110769146_0.510925484301437-2 chr7 132315763 132317054 + 0.510925484301437 NA non-coding (NR_028578, exon 1 of 1) non-coding (NR_028578, exon 1 of 1) 618 NM_001360768 77590 Mm.213582 NM_029935 ENSMUSG00000030930 Chst15 4631426J05Rik|BRAG|GalNAc4S-6ST|GalNAcS-6ST|MAd5|mKIAA0598 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein-coding common_peak1_114_81_0.197903216358805_6.45650361279749_0.510925484301437 chr15 81190049 81190616 + 0.510925484301437 NA promoter-TSS (NR_015603) promoter-TSS (NR_015603) 425 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak1_133_124_-0.191286246594943_6.87014116136462_0.510866621954391 chr8 123253738 123255234 + 0.510866621954391 NA promoter-TSS (NM_001310661) promoter-TSS (NM_001310661) -264 NM_028200 72325 Mm.276193 NM_028200 ENSMUSG00000001062 Vps9d1 1300018I17Rik|2410004N05Rik|5DOS1|Vsp9d1 VPS9 domain containing 1 protein-coding common_peak1_267_239_-0.139447537114619_7.83716682705121_0.510648514590556 chr2 157422989 157425208 + 0.510648514590556 NA promoter-TSS (NM_009271) promoter-TSS (NM_009271) -195 NM_009271 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_216_159_0.143125514666306_7.39349085222052_0.510522248765638 chr10 128546580 128549345 + 0.510522248765638 NA promoter-TSS (NM_134003) promoter-TSS (NM_134003) -218 NM_134003 103284 Mm.68289 NM_134003 ENSMUSG00000039810 Zc3h10 AI790326 zinc finger CCCH type containing 10 protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-10 chr7 66571766 66572327 + 0.51032171069054 NA Intergenic Intergenic 117515 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_26_29_-0.427288765135116_4.69324621304096_0.51032171069054 chr1 51915246 51915625 + 0.51032171069054 NA intron (NM_010863, intron 1 of 29) CpG 543 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding unique_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054 chr12 4863063 4863745 + 0.51032171069054 NA 3' UTR (NM_001033488, exon 14 of 14) 3' UTR (NM_001033488, exon 14 of 14) 10955 NM_001033488 432628 Mm.154078 NM_001033488 ENSMUSG00000037336 Mfsd2b Gm1964 major facilitator superfamily domain containing 2B protein-coding common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-2 chr18 6760455 6760882 + 0.51032171069054 NA Intergenic Intergenic -4499 NM_181070 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-8 chr4 139230831 139231274 + 0.51032171069054 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 36941 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-7 chr4 128961939 128962253 + 0.51032171069054 NA 5' UTR (NM_172875, exon 2 of 11) 5' UTR (NM_172875, exon 2 of 11) 359 NM_172875 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding common_peak1_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-6 chr9 21547518 21547877 + 0.51032171069054 NA intron (NM_153141, intron 1 of 14) intron (NM_153141, intron 1 of 14) 803 NM_153141 59035 Mm.178115 NM_021531 ENSMUSG00000032185 Carm1 Prmt4 coactivator-associated arginine methyltransferase 1 protein-coding common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-7 chr6 91476816 91477193 + 0.51032171069054 NA intron (NM_028766, intron 1 of 11) intron (NM_028766, intron 1 of 11) 3253 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding unique_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054 chr14 48131971 48132645 + 0.51032171069054 NA intron (NM_033602, intron 1 of 5) intron (NM_033602, intron 1 of 5) 11439 NM_033602 93834 Mm.296457 NM_033602 ENSMUSG00000021846 Peli2 AW047589|BB129927 pellino 2 protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-8 chr4 137644188 137644506 + 0.51032171069054 NA exon (NM_001347227, exon 23 of 27) exon (NM_001347227, exon 23 of 27) -20379 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-2 chr11 118402052 118402454 + 0.51032171069054 NA promoter-TSS (NM_011150) promoter-TSS (NM_011150) -294 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-6 chr2 174463562 174464004 + 0.51032171069054 NA intron (NM_025983, intron 1 of 2) intron (NM_025983, intron 1 of 2) 318 NM_025983 67126 Mm.20841 NM_025983 ENSMUSG00000016252 Atp5e 2410043G19Rik|ATPE|AV000645|Atp5f1e ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054 chr1 74284338 74284608 + 0.51032171069054 NA promoter-TSS (NM_025580) promoter-TSS (NM_025580) 265 NM_001190444 227290 Mm.379371 NM_146110 ENSMUSG00000006299 Aamp AU040907|Aamp-rs angio-associated migratory protein protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-4 chr19 5912990 5913446 + 0.51032171069054 NA promoter-TSS (NM_001291078) promoter-TSS (NM_001291078) -347 NM_001291078 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak1_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-4 chr15 102235079 102235569 + 0.51032171069054 NA 3' UTR (NM_011244, exon 10 of 10) 3' UTR (NM_011244, exon 10 of 10) -3389 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-4 chr3 98414286 98414942 + 0.51032171069054 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 32133 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-3 chr12 33146911 33147329 + 0.51032171069054 NA promoter-TSS (NM_028139) promoter-TSS (NM_028139) 466 NR_015602 320046 Mm.208337 NR_015602 ENSMUSG00000052125 F730043M19Rik - RIKEN cDNA F730043M19 gene ncRNA common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-5 chr2 170130665 170131021 + 0.51032171069054 NA intron (NM_001159683, intron 2 of 6) CpG 377 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-7 chr4 129336122 129336451 + 0.51032171069054 NA promoter-TSS (NM_009030) promoter-TSS (NM_009030) 260 NM_025970 67106 Mm.36575 NM_025970 ENSMUSG00000057572 Zbtb8os 2010001H09Rik|2310028N13Rik|AI851226|Arch|Archm zinc finger and BTB domain containing 8 opposite strand protein-coding unique_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-3 chr7 29980474 29980843 + 0.51032171069054 NA Intergenic Intergenic -3297 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-6 chr3 145888634 145888901 + 0.51032171069054 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -35495 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-3 chr16 4003995 4004452 + 0.51032171069054 NA Intergenic Intergenic -2545 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding unique_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-3 chr5 121848025 121848554 + 0.51032171069054 NA promoter-TSS (NM_001359949) promoter-TSS (NM_001359949) -708 NM_175474 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-9 chr5 139018112 139018471 + 0.51032171069054 NA 3' UTR (NM_001253890, exon 11 of 11) 3' UTR (NM_001253890, exon 11 of 11) -23338 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-3 chr13 9094994 9095497 + 0.51032171069054 NA intron (NM_172585, intron 1 of 17) intron (NM_172585, intron 1 of 17) 1364 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-3 chr2 181837456 181838018 + 0.51032171069054 NA promoter-TSS (NM_153594) promoter-TSS (NM_153594) -117 NM_153594 245867 Mm.491085 NM_153594 ENSMUSG00000027589 Pcmtd2 5330414D10Rik|AI314201 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054 chr1 180387833 180388413 + 0.51032171069054 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -57574 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-2 chr3 68508114 68508716 + 0.51032171069054 NA intron (NM_001113421, intron 2 of 7) intron (NM_001113421, intron 2 of 7) 14234 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-6 chr5 24825782 24826237 + 0.51032171069054 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 16352 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-2 chr10 43901903 43902312 + 0.51032171069054 NA promoter-TSS (NM_001081054) promoter-TSS (NM_001081054) 300 NM_130892 170728 Mm.390253 NM_130892 ENSMUSG00000019864 Rtn4ip1 D10Ertd690e|NIMP reticulon 4 interacting protein 1 protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-5 chr19 24671099 24671395 + 0.51032171069054 NA Intergenic Intergenic -2761 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-9 chr6 94635761 94636273 + 0.51032171069054 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -29602 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-2 chr19 34526804 34527354 + 0.51032171069054 NA intron (NM_021460, intron 1 of 9) intron (NM_021460, intron 1 of 9) 395 NM_001111100 16889 Mm.157545 NM_021460 ENSMUSG00000024781 Lipa AA960673|Lal|Lip-1|Lip1 lysosomal acid lipase A protein-coding common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054 chr1 33688965 33689517 + 0.51032171069054 NA Intergenic Intergenic 19417 NR_033199 67503 Mm.87069 NM_026204 ENSMUSG00000103746 1700001G17Rik - RIKEN cDNA 1700001G17 gene ncRNA common_peak1_34_22_0.327794036488791_4.68745897430141_0.51032171069054-5 chr4 83378712 83378999 + 0.51032171069054 NA non-coding (NR_045450, exon 3 of 3) non-coding (NR_045450, exon 3 of 3) 11813 NR_045450 790913 Mm.406752 NR_045450 ENSMUSG00000086321 Gm11413 - predicted gene 11413 ncRNA common_peak1_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-5 chr8 111728165 111728489 + 0.51032171069054 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 3809 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-4 chr16 13404910 13405292 + 0.51032171069054 NA intron (NM_153588, intron 11 of 14) intron (NM_153588, intron 11 of 14) -44422 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-2 chr10 89527326 89527867 + 0.51032171069054 NA intron (NM_001163504, intron 1 of 9) (GA)n|Simple_repeat|Simple_repeat 6026 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding common_peak2_34_22_0.327794036488791_4.68745897430141_0.51032171069054-10 chr7 127025430 127025827 + 0.51032171069054 NA exon (NM_010772, exon 2 of 5) exon (NM_010772, exon 2 of 5) 851 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak2_26_29_-0.427288765135116_4.69324621304096_0.51032171069054-11 chr8 110938581 110938911 + 0.51032171069054 NA intron (NM_009179, intron 1 of 6) intron (NM_009179, intron 1 of 6) 18881 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak1_56_57_-0.30798193835497_5.70399002595009_0.510148353955622-4 chrX 74243743 74244636 + 0.510148353955622 NA intron (NM_001290421, intron 1 of 46) intron (NM_001290421, intron 1 of 46) 2345 NM_010227 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak1_69_47_0.259338512251403_5.71463175684686_0.510148353955622 chr10 59950144 59950822 + 0.510148353955622 NA 3' UTR (NM_029083, exon 3 of 3) 3' UTR (NM_029083, exon 3 of 3) 1287 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_56_57_-0.30798193835497_5.70399002595009_0.510148353955622-2 chr10 120582810 120583535 + 0.510148353955622 NA Intergenic Intergenic -106703 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_68_47_0.238726403302553_5.70432570237243_0.510148353955622 chr15 56692745 56693656 + 0.510148353955622 NA intron (NR_002874, intron 1 of 3) intron (NR_002874, intron 1 of 3) 1346 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_68_47_0.238726403302553_5.70432570237243_0.510148353955622 chr11 8587034 8588059 + 0.510148353955622 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 76989 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_69_47_0.259338512251403_5.71463175684686_0.510148353955622-3 chr8 11258289 11258933 + 0.510148353955622 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -54194 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_69_47_0.259338512251403_5.71463175684686_0.510148353955622-4 chr18 63462877 63463542 + 0.510148353955622 NA Intergenic Intergenic -76026 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding common_peak2_69_47_0.259338512251403_5.71463175684686_0.510148353955622 chr11 120348026 120348386 + 0.510148353955622 NA promoter-TSS (NR_105900) promoter-TSS (NR_105900) 289 NM_001313923 11465 Mm.196173 NM_009609 ENSMUSG00000062825 Actg1 AL023024|Actg|Actl|E51 actin, gamma, cytoplasmic 1 protein-coding common_peak1_69_47_0.259338512251403_5.71463175684686_0.510148353955622-5 chr4 88793684 88794289 + 0.510148353955622 NA promoter-TSS (NM_001161609).6 promoter-TSS (NM_001161609).6 244 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 - predicted gene 13275 protein-coding common_peak1_56_57_-0.30798193835497_5.70399002595009_0.510148353955622-3 chr18 84867515 84868255 + 0.510148353955622 NA intron (NM_001348159, intron 1 of 5) intron (NM_001348159, intron 1 of 5) 16547 NM_001348159 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding common_peak1_69_47_0.259338512251403_5.71463175684686_0.510148353955622-2 chr14 70442545 70443387 + 0.510148353955622 NA promoter-TSS (NR_029802) promoter-TSS (NR_029802) 261 NM_001164082 67065 Mm.20420 NM_025945 ENSMUSG00000000776 Polr3d 2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51 polymerase (RNA) III (DNA directed) polypeptide D protein-coding common_peak2_69_47_0.259338512251403_5.71463175684686_0.510148353955622-2 chr2 173000143 173000776 + 0.510148353955622 NA intron (NM_175112, intron 1 of 11) CpG 342 NM_175112 66679 Mm.4113 NM_175112 ENSMUSG00000027509 Rae1 3230401I12Rik|D2Ertd342e|MNRP|MNRP41 ribonucleic acid export 1 protein-coding common_peak1_69_47_0.259338512251403_5.71463175684686_0.510148353955622-6 chr4 139597808 139598431 + 0.510148353955622 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 23399 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_68_47_0.238726403302553_5.70432570237243_0.510148353955622-2 chr9 64084617 64085378 + 0.510148353955622 NA intron (NR_040743, intron 1 of 2) CpG 4236 NR_040743 76814 Mm.243771 NR_040743 Scarletltr 2600006L11Rik Scarletltr, erythroid developmental long intergenic non-protein coding transcript ncRNA common_peak1_56_57_-0.30798193835497_5.70399002595009_0.510148353955622 chr1 132150512 132151338 + 0.510148353955622 NA Intergenic Intergenic -11240 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak1_69_47_0.259338512251403_5.71463175684686_0.510148353955622-3 chr17 5741483 5741960 + 0.510148353955622 NA intron (NM_146073, intron 8 of 8) intron (NM_146073, intron 8 of 8) -56936 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak1_133_95_0.189535537345987_6.67973026939415_0.509825734201316 chr11 100969305 100970709 + 0.509825734201316 NA exon (NM_008986, exon 1 of 2) exon (NM_008986, exon 1 of 2) 608 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding common_peak1_132_95_0.178805023824877_6.67436501263359_0.509825734201316 chr11 97765890 97767082 + 0.509825734201316 NA 5' UTR (NM_026186, exon 1 of 10) 5' UTR (NM_026186, exon 1 of 10) 127 NM_026186 67480 Mm.33206 NM_026186 ENSMUSG00000018541 Cwc25 1300013D05Rik|AA473636|Ccdc49|R75228 CWC25 spliceosome-associated protein protein-coding common_peak2_132_95_0.178805023824877_6.67436501263359_0.509825734201316 chr8 108895964 108896971 + 0.509825734201316 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -40393 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak1_133_95_0.189535537345987_6.67973026939415_0.509825734201316-2 chr9 96363003 96364315 + 0.509825734201316 NA promoter-TSS (NM_001357213) promoter-TSS (NM_001357213) 56 NM_001357213 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_115_109_-0.213501671720638_6.67460887766434_0.509825734201292-2 chr8 22192789 22193648 + 0.509825734201292 NA intron (NM_027338, intron 1 of 13) CpG 358 NM_027338 70160 Mm.41453 NM_027338 ENSMUSG00000031479 Vps36 1700010A24Rik|2210415M20Rik|2810408E15Rik|Eap45 vacuolar protein sorting 36 protein-coding common_peak1_115_109_-0.213501671720638_6.67460887766434_0.509825734201292 chr7 46845822 46846994 + 0.509825734201292 NA promoter-TSS (NM_001136069) promoter-TSS (NM_001136069) 604 NR_102727 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak2_98_69_0.211563590107002_6.23506481199847_0.509714276950291 chr1 184084051 184084761 + 0.509714276950291 NA Intergenic Intergenic 50025 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_83_81_-0.252072288171948_6.23151586053211_0.509714276950291 chr8 80878766 80879994 + 0.509714276950291 NA intron (NM_021356, intron 1 of 9) CpG 1099 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak1_194_142_0.15204937951157_7.23589602653417_0.509631186121324 chr12 8498719 8499917 + 0.509631186121324 NA exon (NM_007483, exon 1 of 1) exon (NM_007483, exon 1 of 1) 691 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak1_218_160_0.14727918010552_7.40455646816738_0.509281472173305 chr15 38708130 38710132 + 0.509281472173305 NA Intergenic Intergenic 19385 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak1_270_241_-0.135473629804617_7.85112642237229_0.508828433560266 chr1 155243157 155245482 + 0.508828433560266 NA Intergenic CpG 85616 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak2_153_142_-0.186091864180444_7.06682540468817_0.508577621102526 chr15 79347630 79348806 + 0.508577621102526 NA promoter-TSS (NM_001304832) promoter-TSS (NM_001304832) 157 NM_001304831 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_115_82_0.192818610457097_6.47144873657547_0.508549480054183-2 chr16 55817401 55818700 + 0.508549480054183 NA exon (NM_001159394, exon 5 of 12) exon (NM_001159394, exon 5 of 12) 4088 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_115_82_0.192818610457097_6.47144873657547_0.508549480054183 chr10 121586090 121587315 + 0.508549480054183 NA promoter-TSS (NM_019786) promoter-TSS (NM_019786) 92 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak1_99_95_-0.229718618142092_6.47010319165011_0.508549480054158 chr2 37422005 37422956 + 0.508549480054158 NA intron (NM_001100591, intron 1 of 21) intron (NM_001100591, intron 1 of 21) 423 NM_001100591 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007-7 chr9 121710604 121711278 + 0.508346935805007 NA intron (NM_026794, intron 2 of 2) intron (NM_026794, intron 2 of 2) 552 NM_026794 26901 Mm.24848 NM_026794 ENSMUSG00000032526 Ss18l2 1110020I04Rik|AI463209|Deb1 SS18, nBAF chromatin remodeling complex subunit like 2 protein-coding common_peak2_56_38_0.264596837910353_5.41770063781743_0.508346935805007 chr13 34372416 34373264 + 0.508346935805007 NA Intergenic Intergenic -27658 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_45_47_-0.342109198924901_5.41390790125871_0.508346935805007-3 chr8 116992960 116993511 + 0.508346935805007 NA intron (NM_026572, intron 1 of 4) CpG 214 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007-6 chr9 44905287 44905695 + 0.508346935805007 NA Intergenic Intergenic 15251 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007-5 chr5 76529394 76530137 + 0.508346935805007 NA intron (NM_001359370, intron 1 of 19) intron (NM_001359370, intron 1 of 19) 407 NM_001359373 69940 Mm.403233 NM_027270 ENSMUSG00000036435 Exoc1 2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p exocyst complex component 1 protein-coding common_peak1_45_47_-0.342109198924901_5.41390790125871_0.508346935805007-2 chr11 93995485 93995817 + 0.508346935805007 NA promoter-TSS (NM_001199203) promoter-TSS (NM_001199203) -440 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007-3 chr18 84088160 84088653 + 0.508346935805007 NA intron (NM_146090, intron 1 of 1) CpG 248 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak1_45_47_-0.342109198924901_5.41390790125871_0.508346935805007-3 chr8 106519138 106519573 + 0.508346935805007 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 8503 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak2_45_47_-0.342109198924901_5.41390790125871_0.508346935805007 chr11 86992887 86993622 + 0.508346935805007 NA intron (NM_001005341, intron 1 of 4) CpG 508 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak2_45_47_-0.342109198924901_5.41390790125871_0.508346935805007-2 chr12 111448868 111449338 + 0.508346935805007 NA intron (NM_009396, intron 6 of 11) intron (NM_009396, intron 6 of 11) 6442 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak2_56_38_0.264596837910353_5.41770063781743_0.508346935805007-2 chr19 6254242 6254787 + 0.508346935805007 NA intron (NM_194348, intron 24 of 39) intron (NM_194348, intron 24 of 39) -10129 NR_029830 723957 NR_029830 ENSMUSG00000065582 Mir194-2 Mirn194-2|mir-194-2 microRNA 194-2 ncRNA common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007-2 chr12 87199736 87200212 + 0.508346935805007 NA promoter-TSS (NM_001290288) promoter-TSS (NM_001290288) 255 NM_001033475 382620 Mm.374912 NM_001033475 ENSMUSG00000034111 Tmed8 6430595O10Rik|AI447224|Gm1184|Mem1 transmembrane p24 trafficking protein 8 protein-coding common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007-4 chr4 130001925 130002448 + 0.508346935805007 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 10132 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_56_38_0.264596837910353_5.41770063781743_0.508346935805007 chr10 60002763 60003114 + 0.508346935805007 NA promoter-TSS (NM_001199187) promoter-TSS (NM_001199187) 133 NM_026937 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding common_peak1_45_47_-0.342109198924901_5.41390790125871_0.508346935805007 chr1 132289294 132290021 + 0.508346935805007 NA Intergenic Intergenic -8969 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak2_56_38_0.264596837910353_5.41770063781743_0.508346935805007-3 chr9 21752111 21752618 + 0.508346935805007 NA Intergenic Intergenic 7939 NR_151672 67629 Mm.295642 NM_026282 ENSMUSG00000074476 Spc24 2410030K01Rik|AV109292|Spbc24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein-coding common_peak1_83_58_0.222836667084295_5.99406138290399_0.508177771104095 chr11 76060270 76061139 + 0.508177771104095 NA intron (NM_026664, intron 19 of 21) MIRb|SINE|MIR -32922 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding common_peak2_70_69_-0.264662275238235_5.99695187932585_0.508177771104095 chr11 97450213 97451020 + 0.508177771104095 NA intron (NM_021493, intron 1 of 18) intron (NM_021493, intron 1 of 18) 456 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_70_69_-0.264662275238235_5.99695187932585_0.508177771104095-3 chr13 66932609 66933317 + 0.508177771104095 NA 5' UTR (NM_008959, exon 1 of 13) 5' UTR (NM_008959, exon 1 of 13) 109 NM_025547 66410 Mm.347939 NM_025547 ENSMUSG00000021519 Mterf3 2410017I18Rik|Mterfd1 mitochondrial transcription termination factor 3 protein-coding common_peak1_83_58_0.222836667084295_5.99406138290399_0.508177771104095-3 chr4 137494449 137495189 + 0.508177771104095 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 26016 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_83_58_0.222836667084295_5.99406138290399_0.508177771104095-2 chr3 41172346 41173515 + 0.508177771104095 NA Intergenic Intergenic -89884 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_70_69_-0.264662275238235_5.99695187932585_0.508177771104095-2 chr12 35284500 35285574 + 0.508177771104095 NA Intergenic Intergenic -90140 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak1_70_69_-0.264662275238235_5.99695187932585_0.508177771104095 chr17 23770729 23771550 + 0.508177771104095 NA intron (NM_001357993, intron 1 of 8) CpG 452 NM_153791 224613 Mm.328835 NM_153791 ENSMUSG00000040097 Flywch1 E030034P13Rik|mKIAA1552 FLYWCH-type zinc finger 1 protein-coding common_peak2_83_58_0.222836667084295_5.99406138290399_0.508177771104095-2 chr19 41670021 41670688 + 0.508177771104095 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 73502 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak2_83_58_0.222836667084295_5.99406138290399_0.508177771104095 chr16 90220890 90221779 + 0.508177771104095 NA intron (NM_011434, intron 1 of 4) intron (NM_011434, intron 1 of 4) 592 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding common_peak2_70_69_-0.264662275238235_5.99695187932585_0.508177771104095-4 chr3 152568328 152569424 + 0.508177771104095 NA intron (NM_001355635, intron 6 of 8) intron (NM_001355635, intron 6 of 8) -98037 NR_040386 99542 Mm.394921 NR_040386 ENSMUSG00000097745 AI115009 - expressed sequence AI115009 ncRNA common_peak1_70_69_-0.264662275238235_5.99695187932585_0.508177771104095-2 chr5 64864886 64866145 + 0.508177771104095 NA Intergenic Intergenic 61992 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_219_161_0.144872339319827_7.41228617254454_0.508055313579527 chr4 124703373 124705694 + 0.508055313579527 NA intron (NM_010213, intron 1 of 5) intron (NM_010213, intron 1 of 5) 3834 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding common_peak2_116_110_-0.214261467013328_6.68728513284344_0.507795445601793 chr18 80255279 80256858 + 0.507795445601793 NA promoter-TSS (NM_001164424) promoter-TSS (NM_001164424) -158 NM_001164424 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-10 chr9 113730344 113730551 + 0.50761186003982 NA Intergenic Intergenic -11026 NM_001286599 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-6 chr2 58552042 58552579 + 0.50761186003982 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 9100 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-10 chr9 120866303 120866589 + 0.50761186003982 NA Intergenic Intergenic 48804 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-9 chr9 31386259 31386643 + 0.50761186003982 NA intron (NM_001359654, intron 1 of 25) CpG 259 NM_001359654 235134 Mm.238146 NM_172766 ENSMUSG00000042185 Nfrkb A530090G11Rik nuclear factor related to kappa B binding protein protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-7 chr4 133864093 133864304 + 0.50761186003982 NA intron (NM_009097, intron 11 of 21) intron (NM_009097, intron 11 of 21) 10533 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-3 chr13 53502088 53502514 + 0.50761186003982 NA Intergenic Intergenic -29521 NM_013601 17702 Mm.1763 NM_013601 ENSMUSG00000021469 Msx2 BB122635|Hox-8|Hox8|Hox8.1 msh homeobox 2 protein-coding unique_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-5 chr7 141455323 141455757 + 0.50761186003982 NA intron (NM_025802, intron 1 of 7) CpG 352 NM_001163689 66853 Mm.29998 NM_025802 ENSMUSG00000025509 Pnpla2 0610039C21Rik|1110001C14Rik|Atgl|TTS-2.2 patatin-like phospholipase domain containing 2 protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-3 chr13 5871802 5872089 + 0.50761186003982 NA Intergenic Intergenic 10456 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-11 chrX 51018340 51018647 + 0.50761186003982 NA promoter-TSS (NM_172413) promoter-TSS (NM_172413) -475 NM_172413 72065 Mm.43152 NM_172413 ENSMUSG00000050029 Rap2c 2010200P20Rik|AI194294|AL022976 RAP2C, member of RAS oncogene family protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-2 chr1 91085993 91086548 + 0.50761186003982 NA intron (NM_008515, intron 7 of 22) intron (NM_008515, intron 7 of 22) 32826 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-8 chr2 137686893 137687292 + 0.50761186003982 NA Intergenic Intergenic -569492 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-6 chr13 24638821 24639118 + 0.50761186003982 NA intron (NM_001080381, intron 1 of 14) intron (NM_001080381, intron 1 of 14) 321 NM_029679 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-5 chr16 90845361 90845601 + 0.50761186003982 NA intron (NM_001316761, intron 1 of 5) intron (NM_001316761, intron 1 of 5) 14622 NM_001316761 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-4 chr11 70873978 70874390 + 0.50761186003982 NA intron (NM_001291143, intron 2 of 18) intron (NM_001291143, intron 2 of 18) 29423 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding unique_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982 chr11 91064943 91065322 + 0.50761186003982 NA Intergenic Intergenic 260441 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-2 chr12 77950524 77950748 + 0.50761186003982 NA Intergenic Intergenic -276019 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-2 chr13 34708457 34708947 + 0.50761186003982 NA Intergenic Intergenic -30940 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-3 chr10 12694136 12694596 + 0.50761186003982 NA intron (NM_011682, intron 24 of 73) B2_Mm2|SINE|B2 167369 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-7 chr2 30699996 30700257 + 0.50761186003982 NA Intergenic Intergenic -21084 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982 chr1 58972911 58973184 + 0.50761186003982 NA promoter-TSS (NR_151686) promoter-TSS (NR_151686) 435 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-8 chr8 44992145 44992508 + 0.50761186003982 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 42118 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-4 chr15 101372233 101372445 + 0.50761186003982 NA Intergenic Intergenic -2214 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding unique_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-4 chr17 94834807 94835137 + 0.50761186003982 NA promoter-TSS (NR_045963) promoter-TSS (NR_045963) -173 NR_045963 100038746 Mm.456686 NR_045963 ENSMUSG00000066057 Gm1976 100038868 predicted gene 1976 ncRNA common_peak1_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-9 chr8 120063153 120063346 + 0.50761186003982 NA Intergenic Intergenic 38223 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982 chr1 7398113 7398703 + 0.50761186003982 NA Intergenic CpG 309488 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak2_18_22_-0.547343521938621_4.2498901950877_0.50761186003982-5 chr12 72085024 72085395 + 0.50761186003982 NA promoter-TSS (NM_001205067) promoter-TSS (NM_001205067) 104 NM_026038 67217 Mm.286120 NM_026038 ENSMUSG00000019718 L3hypdh 2810055F11Rik L-3-hydroxyproline dehydratase (trans-) protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-7 chr14 41643441 41643895 + 0.507611860039817 NA Intergenic Intergenic 70457 NM_001358038 666214 NM_001358038 1700049E17Rik1 1700049E17Rik RIKEN cDNA 1700049E17 gene, gene 1 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-12 chr6 92465082 92465426 + 0.507611860039817 NA intron (NM_001081146, intron 2 of 8) intron (NM_001081146, intron 2 of 8) 16138 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-3 chr13 15985556 15985853 + 0.507611860039817 NA intron (NR_155430, intron 1 of 3) intron (NR_155430, intron 1 of 3) -26147 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-12 chr18 4758129 4758509 + 0.507611860039817 NA Intergenic Intergenic -54167 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817 chr11 72039177 72039687 + 0.507611860039817 NA Intergenic Intergenic -1923 NM_053245 114230 Mm.95707 NM_053245 ENSMUSG00000040554 Aipl1 A930007I01Rik aryl hydrocarbon receptor-interacting protein-like 1 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-5 chr14 30879649 30879852 + 0.507611860039817 NA intron (NM_181390, intron 1 of 2) intron (NM_181390, intron 1 of 2) 493 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-8 chr16 56074927 56075381 + 0.507611860039817 NA promoter-TSS (NM_025483) promoter-TSS (NM_025483) -250 NM_025483 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-12 chr8 71579684 71579974 + 0.507611860039817 NA intron (NM_001357180, intron 3 of 12) intron (NM_001357180, intron 3 of 12) 9235 NM_001357182 26457 Mm.38165 NM_011977 ENSMUSG00000031808 Slc27a1 FATP1|Fatp solute carrier family 27 (fatty acid transporter), member 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-22 chr7 110122498 110122834 + 0.507611860039817 NA exon (NM_001355058, exon 1 of 10) exon (NM_001355058, exon 1 of 10) 607 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-15 chr3 39268964 39269254 + 0.507611860039817 NA Intergenic Intergenic 382169 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-25 chr8 71537940 71538183 + 0.507611860039817 NA promoter-TSS (NM_198095) promoter-TSS (NM_198095) -624 NM_198095 69550 Mm.260325 NM_198095 ENSMUSG00000046718 Bst2 2310015I10Rik|Bst-2|C87040|CD317|DAMP-1|GREG bone marrow stromal cell antigen 2 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-4 chr13 69588475 69588808 + 0.507611860039817 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 22822 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-18 chr4 130792844 130793168 + 0.507611860039817 NA intron (NM_011520, intron 1 of 4) intron (NM_011520, intron 1 of 4) 469 NM_011520 20970 Mm.206536 NM_011520 ENSMUSG00000025743 Sdc3 Synd3|mKIAA0468|syn-3 syndecan 3 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-6 chr2 13271677 13272049 + 0.507611860039817 NA promoter-TSS (NM_009105) promoter-TSS (NM_009105) -448 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-6 chr14 20765097 20765487 + 0.507611860039817 NA intron (NM_001039139, intron 8 of 18) intron (NM_001039139, intron 8 of 18) 28796 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-14 chr19 41935554 41935778 + 0.507611860039817 NA intron (NM_001360676, intron 2 of 11) intron (NM_001360676, intron 2 of 11) 2221 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-14 chr7 142383776 142384242 + 0.507611860039817 NA intron (NM_009983, intron 2 of 8) intron (NM_009983, intron 2 of 8) 3861 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-9 chr4 93335397 93335781 + 0.507611860039817 NA promoter-TSS (NM_026954) promoter-TSS (NM_026954) -78 NM_026954 69136 Mm.171558 NM_026954 ENSMUSG00000054000 Tusc1 2200001D17Rik|TSG-9 tumor suppressor candidate 1 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-10 chr4 155834171 155834595 + 0.507611860039817 NA Intergenic Intergenic 3114 NM_025338 66077 Mm.28999 NM_025338 ENSMUSG00000065990 Aurkaip1 0610033H09Rik|Aip|Akip|MRP-S38 aurora kinase A interacting protein 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-26 chr8 86769980 86770394 + 0.507611860039817 NA Intergenic Intergenic -24181 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-6 chr2 102185783 102186192 + 0.507611860039817 NA intron (NM_178886, intron 1 of 5) intron (NM_178886, intron 1 of 5) 473 NM_178886 241576 Mm.489740 NM_178886 ENSMUSG00000048058 Ldlrad3 6430500P08|AI194318|Lrad3 low density lipoprotein receptor class A domain containing 3 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-13 chr18 61707187 61707396 + 0.507611860039817 NA intron (NM_172832, intron 1 of 5) intron (NM_172832, intron 1 of 5) 344 NM_172832 240334 Mm.234457 NM_172832 ENSMUSG00000024579 Pcyox1l BC060677|C630049M13 prenylcysteine oxidase 1 like protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-24 chr8 41133229 41133649 + 0.507611860039817 NA intron (NM_001005863, intron 1 of 13) intron (NM_001005863, intron 1 of 13) 287 NM_001005863 102103 Mm.149438 NM_001005863 ENSMUSG00000045636 Mtus1 AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288 mitochondrial tumor suppressor 1 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-7 chr2 91062260 91062512 + 0.507611860039817 NA non-coding (NR_110981, exon 8 of 8) non-coding (NR_110981, exon 8 of 8) 7929 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-4 chr11 70918342 70918829 + 0.507611860039817 NA intron (NM_019400, intron 9 of 17) MIRc|SINE|MIR 51388 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-13 chr6 97209671 97210236 + 0.507611860039817 NA promoter-TSS (NM_022992) promoter-TSS (NM_022992) -839 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817 chr1 153301018 153301333 + 0.507611860039817 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 31611 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-3 chr12 48020863 48021244 + 0.507611860039817 NA Intergenic Intergenic -1202278 NM_021361 664883 Mm.247195 NM_021361 ENSMUSG00000021047 Nova1 9430099M15Rik|G630039L02|Nova-1 neuro-oncological ventral antigen 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-16 chr3 94310395 94310601 + 0.507611860039817 NA intron (NM_029431, intron 1 of 5) intron (NM_029431, intron 1 of 5) 366 NM_029431 75778 Mm.45092 NM_029431 ENSMUSG00000028145 Them4 2700077M13Rik|4921507I02Rik thioesterase superfamily member 4 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-8 chr3 84609943 84610186 + 0.507611860039817 NA Intergenic Intergenic 16490 NM_207278 403175 Mm.83086 NM_207278 ENSMUSG00000047819 Tigd4 C130063O11Rik|Gm418 tigger transposable element derived 4 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-21 chr6 100833323 100833545 + 0.507611860039817 NA promoter-TSS (NM_182939) promoter-TSS (NM_182939) -204 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-11 chr8 70470288 70470629 + 0.507611860039817 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 6485 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-7 chr3 19628015 19628213 + 0.507611860039817 NA Intergenic Intergenic -16346 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-19 chr5 123345477 123345798 + 0.507611860039817 NA intron (NM_029850, intron 1 of 5) CpG 1189 NM_029850 77045 Mm.151960 NM_029850 ENSMUSG00000029438 Bcl7a 4432415N06Rik|AI448316 B cell CLL/lymphoma 7A protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-16 chr8 64622129 64622442 + 0.507611860039817 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 70824 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-5 chr14 7852401 7852644 + 0.507611860039817 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 34565 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-4 chr12 54656024 54656475 + 0.507611860039817 NA intron (NM_134054, intron 1 of 1) CpG 323 NM_134054 104725 Mm.485026 NM_134054 ENSMUSG00000044408 Sptssa 1110002B05Rik|AA407909|AA409588|AU041967|Ssspta serine palmitoyltransferase, small subunit A protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-8 chr3 104675454 104675892 + 0.507611860039817 NA Intergenic Intergenic 37009 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-11 chr17 75804046 75804312 + 0.507611860039817 NA Intergenic Intergenic -56844 NR_033456 100043885 Mm.127562 NR_033456 Gm4710 - predicted gene 4710 ncRNA unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-15 chr8 25619571 25619931 + 0.507611860039817 NA intron (NM_001001735, intron 1 of 9) intron (NM_001001735, intron 1 of 9) 17467 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-9 chr7 83632125 83632388 + 0.507611860039817 NA intron (NM_023377, intron 1 of 5) intron (NM_023377, intron 1 of 5) 239 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-11 chr5 30949136 30949774 + 0.507611860039817 NA promoter-TSS (NR_003522) promoter-TSS (NR_003522) -611 NR_003522 57742 Mm.389615 NM_021304 ENSMUSG00000006638 Abhd1 LABH-1|LABH1 abhydrolase domain containing 1 protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-5 chr14 120137405 120137739 + 0.507611860039817 NA Intergenic Intergenic -95137 NM_001001490 239283 Mm.138520 NM_001001490 ENSMUSG00000044819 Oxgr1 Cysltr3|Gm299|Gpr80|Gpr99|P2Y15 oxoglutarate (alpha-ketoglutarate) receptor 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-23 chr8 36116710 36117107 + 0.507611860039817 NA intron (NM_172911, intron 3 of 5) intron (NM_172911, intron 3 of 5) 22080 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-9 chr17 26938417 26938794 + 0.507611860039817 NA TTS (NM_001302397) TTS (NM_001302397) 853 NR_104458 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding unique_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-2 chr11 116386432 116387086 + 0.507611860039817 NA intron (NM_027258, intron 2 of 18) PB1D9|SINE|Alu 26273 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-3 chr10 81560759 81561112 + 0.507611860039817 NA intron (NM_001276288, intron 1 of 6) intron (NM_001276288, intron 1 of 6) 1491 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-10 chr17 43568285 43568500 + 0.507611860039817 NA promoter-TSS (NM_013737) promoter-TSS (NM_013737) -59 NM_013737 27226 Mm.9277 NM_013737 ENSMUSG00000023913 Pla2g7 PAF-AH|R75400 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-17 chr4 43389894 43390313 + 0.507611860039817 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) 8121 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-2 chr10 81430585 81430841 + 0.507611860039817 NA Intergenic CpG -3540 NM_026756 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817 chr1 34122191 34122556 + 0.507611860039817 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 5014 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA unique_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817 chr15 76069421 76069685 + 0.507611860039817 NA TTS (NM_133691) TTS (NM_133691) 231 NM_134089 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-10 chr8 41374909 41375138 + 0.507611860039817 NA promoter-TSS (NM_019734) promoter-TSS (NM_019734) -326 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-20 chr6 97177670 97177967 + 0.507611860039817 NA intron (NM_001081111, intron 1 of 16) intron (NM_001081111, intron 1 of 16) 1306 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak2_26_16_0.392138989223064_4.28353233586187_0.507611860039817-2 chr10 20952736 20953050 + 0.507611860039817 NA intron (NM_001358561, intron 1 of 22) CpG 346 NM_001358561 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_26_16_0.392138989223064_4.28353233586187_0.507611860039817-27 chr9 37806343 37806719 + 0.507611860039817 NA Intergenic Intergenic 2642 NM_146883 258883 Mm.377734 NM_146883 ENSMUSG00000066750 Olfr876 MOR161-1 olfactory receptor 876 protein-coding common_peak2_135_126_-0.192963788582202_6.89220279248106_0.507320293764797-2 chr15 37457691 37459474 + 0.507320293764797 NA promoter-TSS (NM_001359842) promoter-TSS (NM_001359842) -71 NM_001359842 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_135_126_-0.192963788582202_6.89220279248106_0.507320293764797-3 chr17 6106869 6108354 + 0.507320293764797 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 781 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_135_126_-0.192963788582202_6.89220279248106_0.507320293764797 chr12 55398122 55399441 + 0.507320293764797 NA promoter-TSS (NM_011968) promoter-TSS (NM_011968) -44 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak1_174_127_0.156902932153194_7.0784514660766_0.507038420922556 chr16 23437731 23439859 + 0.507038420922556 NA Intergenic Intergenic 9662 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_154_143_-0.186873542708896_7.07648823008786_0.507038420922556 chr15 74708406 74709896 + 0.507038420922556 NA promoter-TSS (NR_033197) promoter-TSS (NR_033197) -10 NR_033197 66769 Mm.482908 NM_025756 ENSMUSG00000044276 4933427E11Rik - RIKEN cDNA 4933427E11 gene ncRNA common_peak1_174_127_0.156902932153194_7.0784514660766_0.507038420922556-2 chr7 89516848 89518494 + 0.507038420922556 NA promoter-TSS (NM_029614) promoter-TSS (NM_029614) -85 NM_029614 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_84_82_-0.252606654829838_6.24873610393201_0.506962665446446-2 chr4 133864556 133865408 + 0.506962665446446 NA intron (NM_009097, intron 11 of 21) intron (NM_009097, intron 11 of 21) 9749 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_84_82_-0.252606654829838_6.24873610393201_0.506962665446446 chr6 83244561 83245508 + 0.506962665446446 NA intron (NM_001166067, intron 2 of 24) intron (NM_001166067, intron 2 of 24) 7659 NM_001166067 232156 Mm.333189 NM_001166067 ENSMUSG00000068323 Slc4a5 C330006M16|C330016K18Rik solute carrier family 4, sodium bicarbonate cotransporter, member 5 protein-coding common_peak1_84_82_-0.252606654829838_6.24873610393201_0.506962665446446 chr16 32332346 32333127 + 0.506962665446446 NA intron (NM_177633, intron 1 of 10) CpG 484 NM_177633 224111 Mm.31275 NM_177633 ENSMUSG00000053774 Ubxn7 A630090P18|AI196514|Ubxd7|mKIAA0794 UBX domain protein 7 protein-coding common_peak2_85_82_-0.235851880710736_6.25711349099156_0.506962665446446 chr9 102776915 102777730 + 0.506962665446446 NA Intergenic Intergenic 37674 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_197_144_0.153882537463791_7.25685035874683_0.506892575252363 chr10 122983634 122985747 + 0.506892575252363 NA TTS (NR_029527) TTS (NR_029527) 1034 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_359_316_-0.118135821432558_8.24927111942313_0.506801891895483 chr2 118760956 118763597 + 0.506801891895483 NA intron (NM_001001982, intron 1 of 10) intron (NM_001001982, intron 1 of 10) 385 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding common_peak1_101_96_-0.216301362196466_6.49176216108889_0.506226713128487 chr12 111455534 111457024 + 0.506226713128487 NA Intergenic Intergenic 13618 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_100_96_-0.230414942929714_6.48470537072227_0.506226713128487 chr8 72219623 72220260 + 0.506226713128487 NA exon (NM_026455, exon 2 of 4) exon (NM_026455, exon 2 of 4) 211 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding common_peak2_101_96_-0.216301362196466_6.49176216108889_0.506226713128487 chr1 89069087 89070083 + 0.506226713128487 NA promoter-TSS (NM_133816) promoter-TSS (NM_133816) -830 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_117_83_0.200028682970674_6.4923317642641_0.506226713128462 chr10 128918525 128920055 + 0.506226713128462 NA promoter-TSS (NM_134006) promoter-TSS (NM_134006) 7 NM_001358527 19682 Mm.439856 NM_134006 ENSMUSG00000025350 Rdh5 9-cis|AI987873|RDH4|cRDH retinol dehydrogenase 5 protein-coding common_peak1_117_83_0.200028682970674_6.4923317642641_0.506226713128462-3 chr6 134790930 134792659 + 0.506226713128462 NA promoter-TSS (NR_151454) promoter-TSS (NR_151454) -566 NR_151454 105242798 Mm.398227 NR_151454 1700055D16Rik - RIKEN cDNA 1700055D16 gene ncRNA common_peak1_117_83_0.200028682970674_6.4923317642641_0.506226713128462-2 chr4 129011774 129013290 + 0.506226713128462 NA Intergenic Intergenic 19308 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892-3 chr18 24745036 24745848 + 0.50619083865892 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 36819 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_70_48_0.249910897591523_5.73966529291097_0.50619083865892-3 chr19 5023447 5024299 + 0.50619083865892 NA promoter-TSS (NM_007854) promoter-TSS (NM_007854) -133 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding common_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892-4 chr2 126707401 126708170 + 0.50619083865892 NA intron (NM_019729, intron 1 of 18) intron (NM_019729, intron 1 of 18) 457 NM_019729 84092 Mm.272629 NM_019729 ENSMUSG00000027363 Usp8 AI574262|AW557536|Ubpy|mKIAA0055 ubiquitin specific peptidase 8 protein-coding common_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892 chr12 113098608 113099449 + 0.50619083865892 NA intron (NM_001346696, intron 1 of 19) intron (NM_001346696, intron 1 of 19) 750 NM_054081 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding common_peak1_70_48_0.249910897591523_5.73966529291097_0.50619083865892-2 chr11 94937681 94938659 + 0.50619083865892 NA intron (NM_007742, intron 2 of 50) intron (NM_007742, intron 2 of 50) 1946 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892-5 chr2 144368933 144369601 + 0.50619083865892 NA intron (NM_001166640, intron 1 of 10) CpG 232 NM_181417 228714 Mm.227925 NM_181417 ENSMUSG00000027425 Kat14 2510008M08Rik|ATAC2|AU023459|Csrp2bp|D2Ertd473e|D2Wsu131e|E430020F17 lysine acetyltransferase 14 protein-coding common_peak2_57_58_-0.307730027984575_5.72877803536955_0.50619083865892-5 chr9 98032523 98033626 + 0.50619083865892 NA promoter-TSS (NM_022319) promoter-TSS (NM_022319) 93 NM_022319 64085 Mm.440903 NM_022319 ENSMUSG00000032452 Clstn2 2900042C18Rik|AI448973|CSTN2|Cs2|Cst-2|mKIAA4134 calsyntenin 2 protein-coding common_peak2_57_58_-0.307730027984575_5.72877803536955_0.50619083865892-4 chr8 24432196 24432892 + 0.50619083865892 NA Intergenic Intergenic 6402 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_58_58_-0.283241964039162_5.74102206734226_0.50619083865892-2 chr8 84237365 84237744 + 0.50619083865892 NA promoter-TSS (NM_172503) promoter-TSS (NM_172503) -512 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak1_70_48_0.249910897591523_5.73966529291097_0.50619083865892-4 chr2 71544861 71545523 + 0.50619083865892 NA intron (NM_010054, intron 2 of 2) CpG 1562 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak1_57_58_-0.307730027984575_5.72877803536955_0.50619083865892-2 chr4 150706831 150707304 + 0.50619083865892 NA Intergenic Intergenic -54893 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_57_58_-0.307730027984575_5.72877803536955_0.50619083865892 chr19 3708359 3708907 + 0.50619083865892 NA intron (NM_001358257, intron 1 of 3) CpG 222 NM_001358257 72056 Mm.23780 NM_028077 ENSMUSG00000035372 1810055G02Rik AI256204 RIKEN cDNA 1810055G02 gene protein-coding common_peak2_57_58_-0.307730027984575_5.72877803536955_0.50619083865892-3 chr7 73606520 73607672 + 0.50619083865892 NA Intergenic Intergenic -48701 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_57_58_-0.307730027984575_5.72877803536955_0.50619083865892-3 chr7 81571332 81572221 + 0.50619083865892 NA exon (NM_001004185, exon 1 of 10) exon (NM_001004185, exon 1 of 10) 484 NM_001004185 434204 Mm.181641 NM_001004185 ENSMUSG00000045795 Whamm BB081391|Whdc1|mKIAA1971 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding common_peak2_57_58_-0.307730027984575_5.72877803536955_0.50619083865892-2 chr2 32875422 32876079 + 0.50619083865892 NA promoter-TSS (NM_146119) promoter-TSS (NM_146119) -384 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_70_48_0.249910897591523_5.73966529291097_0.50619083865892 chr1 150099325 150099876 + 0.50619083865892 NA promoter-TSS (NM_011198) promoter-TSS (NM_011198) 274 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA common_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892-2 chr14 20707623 20708090 + 0.50619083865892 NA exon (NM_001252081, exon 1 of 26) exon (NM_001252081, exon 1 of 26) 304 NM_001252082 268721 Mm.275082 NM_027996 ENSMUSG00000021819 Zswim8 2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913 zinc finger SWIM-type containing 8 protein-coding common_peak1_58_58_-0.283241964039162_5.74102206734226_0.50619083865892 chr1 30950256 30950843 + 0.50619083865892 NA promoter-TSS (NR_002688) promoter-TSS (NR_002688) -794 NM_011200 19243 Mm.491181 NM_011200 ENSMUSG00000026064 Ptp4a1 AA415290|AU019864|C130021B01|Prl-1 protein tyrosine phosphatase 4a1 protein-coding common_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892-6 chr9 88270800 88271972 + 0.50619083865892 NA Intergenic Intergenic -56223 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_57_58_-0.307730027984575_5.72877803536955_0.50619083865892 chr1 57969393 57969996 + 0.50619083865892 NA promoter-TSS (NR_027630) promoter-TSS (NR_027630) -170 NR_027630 51960 Mm.339711 NM_030211 ENSMUSG00000054770 Kctd18 4932411A20Rik|6530404F10Rik potassium channel tetramerisation domain containing 18 protein-coding common_peak2_70_48_0.249910897591523_5.73966529291097_0.50619083865892 chr1 135759924 135760325 + 0.50619083865892 NA Intergenic Intergenic -5961 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding unique_peak2_58_58_-0.283241964039162_5.74102206734226_0.50619083865892 chr5 39642711 39643846 + 0.50619083865892 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 1353 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274-3 chr15 73149289 73149573 + 0.505877949819274 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 35516 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-8 chr8 69936159 69936508 + 0.505877949819274 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) -33775 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274 chr12 51693477 51694186 + 0.505877949819274 NA intron (NM_001329698, intron 1 of 5) intron (NM_001329698, intron 1 of 5) -1917 NM_052973 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274-6 chr7 68181553 68181884 + 0.505877949819274 NA intron (NM_010513, intron 5 of 20) intron (NM_010513, intron 5 of 20) 82515 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-5 chr19 24961189 24961496 + 0.505877949819274 NA non-coding (NR_033744, exon 1 of 15) non-coding (NR_033744, exon 1 of 15) 274 NR_033744 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-2 chr17 36031979 36032570 + 0.505877949819274 NA exon (NM_010398, exon 2 of 7) exon (NM_010398, exon 2 of 7) 427 NM_010398 15040 Mm.439648 NM_010398 ENSMUSG00000067212 H2-T23 37b|37c|H-2T23|H2-Qa1|Qa-1|Qa-1(b)|Qa1|Qed-1|T18c|T18c(37)|T23b|T23d histocompatibility 2, T region locus 23 protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-6 chr4 45520397 45520981 + 0.505877949819274 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 10139 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274 chr11 70525462 70526084 + 0.505877949819274 NA intron (NM_008946, intron 1 of 5) intron (NM_008946, intron 1 of 5) 416 NM_008946 19175 Mm.98 NM_008946 ENSMUSG00000018286 Psmb6 Lmp19|Mpnd proteasome (prosome, macropain) subunit, beta type 6 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274-4 chr3 101377103 101377721 + 0.505877949819274 NA intron (NM_207205, intron 1 of 10) CpG 287 NM_207205 78908 Mm.257997 NM_207205 ENSMUSG00000042035 Igsf3 1700016K10Rik|2810035F16Rik|4833439O17Rik|mKIAA0466 immunoglobulin superfamily, member 3 protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-3 chr19 10107592 10108235 + 0.505877949819274 NA Intergenic Intergenic -6410 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274-7 chr7 80026953 80027522 + 0.505877949819274 NA intron (NM_175433, intron 1 of 4) CpG 1009 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274-2 chr12 112796579 112797062 + 0.505877949819274 NA Intergenic Intergenic -12155 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-7 chr7 81788950 81789252 + 0.505877949819274 NA intron (NM_026077, intron 1 of 4) intron (NM_026077, intron 1 of 4) 352 NM_026077 67290 Mm.248391 NM_026077 ENSMUSG00000025102 3110040N11Rik AI851475 RIKEN cDNA 3110040N11 gene protein-coding common_peak1_45_30_0.28865699140938_5.09852480609156_0.505877949819274-4 chr19 23091938 23092457 + 0.505877949819274 NA Intergenic Intergenic -49029 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274-5 chr6 134566294 134566712 + 0.505877949819274 NA intron (NM_008514, intron 1 of 22) GC_rich|Low_complexity|Low_complexity 410 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak2_45_30_0.28865699140938_5.09852480609156_0.505877949819274 chr10 82857980 82858629 + 0.505877949819274 NA promoter-TSS (NM_015762) promoter-TSS (NM_015762) -902 NM_001042513 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-3 chr11 50224726 50225411 + 0.505877949819268 NA promoter-TSS (NM_145926) promoter-TSS (NM_145926) -267 NM_145926 103534 Mm.86759 NM_145926 ENSMUSG00000036620 Mgat4b AA407995|GnTIVb mannoside acetylglucosaminyltransferase 4, isoenzyme B protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-5 chr13 34002444 34002840 + 0.505877949819268 NA promoter-TSS (NM_009068) promoter-TSS (NM_009068) 152 NM_001243192 20719 Mm.252210 NM_009254 ENSMUSG00000060147 Serpinb6a 4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6a protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-7 chr16 45837519 45837997 + 0.505877949819268 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 6620 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-2 chr6 83349499 83349783 + 0.505877949819268 NA intron (NM_175277, intron 1 of 3) intron (NM_175277, intron 1 of 3) 157 NM_175277 78653 Mm.391470 NM_175277 ENSMUSG00000045160 Bola3 1810056O20Rik bolA-like 3 (E. coli) protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-8 chr3 101600169 101600648 + 0.505877949819268 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 4299 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268 chr10 18472095 18472750 + 0.505877949819268 NA intron (NM_001163592, intron 1 of 7) intron (NM_001163592, intron 1 of 7) 2441 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding common_peak1_35_38_-0.393690970189544_5.08855673376748_0.505877949819268 chr14 7850317 7850746 + 0.505877949819268 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 32574 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-2 chr10 40152048 40152505 + 0.505877949819268 NA Intergenic Intergenic -10022 NM_001114332 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-4 chr12 98049788 98050412 + 0.505877949819268 NA Intergenic Intergenic 209359 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak2_35_38_-0.393690970189544_5.08855673376748_0.505877949819268-6 chr15 76207219 76207938 + 0.505877949819268 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 675 NM_201388 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_118_111_-0.202919994720266_6.70589492469747_0.505804290662409 chr5 103775062 103776297 + 0.505804290662409 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 21106 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_221_163_0.140134379520324_7.42761919437825_0.505645828634674 chr15 99972511 99974497 + 0.505645828634674 NA promoter-TSS (NR_028124) promoter-TSS (NR_028124) -217 NR_028124 70281 Mm.484037 NR_028124 ENSMUSG00000100084 2310068J16Rik - RIKEN cDNA 2310068J16 gene ncRNA common_peak1_199_181_-0.159605737192877_7.42799177160226_0.505645828634674 chr14 76555543 76557339 + 0.505645828634674 NA non-coding (NR_027699, exon 2 of 5) non-coding (NR_027699, exon 2 of 5) 246 NR_153389 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak2_154_112_0.162872496318228_6.9016152105743_0.505591733217315 chr14 43527871 43528923 + 0.505591733217315 NA Intergenic Intergenic 79616 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding common_peak1_177_162_-0.167475907404394_7.26499020052888_0.505550072987541 chr9 57261048 57262798 + 0.505550072987541 NA intron (NM_028820, intron 1 of 2) CpG 676 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak1_176_128_0.161954452553635_7.09220448170007_0.505521895607906 chr3 90588147 90589997 + 0.505521895607906 NA intron (NM_001355602, intron 1 of 2) B2_Mm1t|SINE|B2 509 NM_001355602 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak2_248_223_-0.145250678512475_7.73472958280137_0.504999086883702 chr19 5474160 5476040 + 0.504999086883702 NA exon (NM_001164352, exon 1 of 10) exon (NM_001164352, exon 1 of 10) 365 NM_001164352 58859 Mm.276367 NM_021474 ENSMUSG00000024909 Efemp2 0610011K11Rik|Fbln4|MBP1 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 protein-coding common_peak2_248_223_-0.145250678512475_7.73472958280137_0.504999086883702-2 chr7 105736731 105739997 + 0.504999086883702 NA promoter-TSS (NM_133951) promoter-TSS (NM_133951) -979 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak1_71_70_-0.265090850405222_6.01720169430207_0.50495829559894 chr5 38561893 38562594 + 0.50495829559894 NA promoter-TSS (NM_011715) promoter-TSS (NM_011715) -648 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak2_71_70_-0.265090850405222_6.01720169430207_0.50495829559894 chr12 98713717 98714711 + 0.50495829559894 NA intron (NM_001146199, intron 3 of 18) intron (NM_001146199, intron 3 of 18) 20431 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding common_peak1_71_70_-0.265090850405222_6.01720169430207_0.50495829559894-2 chr9 111118186 111119111 + 0.50495829559894 NA intron (NM_027742, intron 1 of 13) CpG 537 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_85_59_0.23229695502767_6.02303907312235_0.504958295598928-2 chr3 53201945 53202530 + 0.504958295598928 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 160690 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_85_59_0.23229695502767_6.02303907312235_0.504958295598928 chr17 24033806 24035020 + 0.504958295598928 NA Intergenic B1_Mur4|SINE|Alu -3830 NM_175440 213171 Mm.133083 NM_175440 ENSMUSG00000050762 Prss27 CAPH2|Mpn|marapsin protease, serine 27 protein-coding common_peak1_84_59_0.215542180908567_6.0146616860628_0.504958295598928 chr4 62699801 62700623 + 0.504958295598928 NA intron (NM_134257, intron 13 of 15) intron (NM_134257, intron 13 of 15) 26238 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_84_59_0.215542180908567_6.0146616860628_0.504958295598928 chr19 46395298 46395706 + 0.504958295598928 NA intron (NM_016860, intron 1 of 10) CpG 233 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding common_peak1_84_59_0.215542180908567_6.0146616860628_0.504958295598928-2 chr5 122371345 122372324 + 0.504958295598928 NA promoter-TSS (NM_024216) promoter-TSS (NM_024216) 129 NM_026883 68948 Mm.474469 NM_026883 ENSMUSG00000029463 Fam216a 1500011H22Rik family with sequence similarity 216, member A protein-coding common_peak2_85_59_0.23229695502767_6.02303907312235_0.504958295598928 chr2 167570176 167570958 + 0.504958295598928 NA Intergenic Intergenic 32372 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_426_321_0.1037882816159_8.38281101892257_0.504551465466208 chr11 120250453 120253875 + 0.504551465466208 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 19217 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_100_71_0.199572897815101_6.26971145034986_0.504282745370237 chr13 70653496 70654286 + 0.504282745370237 NA Intergenic Intergenic -16257 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_100_71_0.199572897815101_6.26971145034986_0.504282745370237 chr1 58726205 58727588 + 0.504282745370237 NA intron (NM_001355056, intron 2 of 8) intron (NM_001355056, intron 2 of 8) -3656 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_101_71_0.213686478548349_6.27676824071649_0.504282745370237 chr1 132316218 132317130 + 0.504282745370237 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 549 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_100_71_0.199572897815101_6.26971145034986_0.504282745370237-2 chr4 56864248 56865394 + 0.504282745370237 NA intron (NM_018761, intron 1 of 18) CpG 390 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding common_peak2_86_83_-0.23656879917404_6.27403302319174_0.504282745370237 chr8 10910709 10911697 + 0.504282745370237 NA Intergenic Intergenic 11281 NR_102285 71624 Mm.139075 NR_102285 ENSMUSG00000109089 4833411C07Rik - RIKEN cDNA 4833411C07 gene ncRNA common_peak2_178_163_-0.168274432281576_7.2734147884773_0.504224975933224 chr5 31630367 31631415 + 0.504224975933224 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 16940 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_396_347_-0.112593940966757_8.38664652536535_0.503942746684648 chr1 155096038 155099576 + 0.503942746684648 NA 3' UTR (NM_010500, exon 1 of 1) 3' UTR (NM_010500, exon 1 of 1) 1829 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_137_128_-0.194593330972789_6.91393058993686_0.503891918693718 chr15 58214142 58215856 + 0.503891918693718 NA promoter-TSS (NM_026346) promoter-TSS (NM_026346) -107 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak1_119_112_-0.203756376362547_6.71830077423391_0.503851147901832-2 chr5 64804955 64806237 + 0.503851147901832 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 2073 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_136_98_0.17685895403617_6.71778609709769_0.503851147901832 chr5 35037848 35039120 + 0.503851147901832 NA Intergenic Intergenic -3025 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak1_119_112_-0.203756376362547_6.71830077423391_0.503851147901832 chr11 75587812 75589677 + 0.503851147901832 NA intron (NM_008850, intron 1 of 11) intron (NM_008850, intron 1 of 11) 665 NM_008850 18738 Mm.3128 NM_008850 ENSMUSG00000017781 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha protein-coding common_peak2_248_184_0.130722783028816_7.59674285203072_0.503669985442885 chr11 70026851 70029633 + 0.503669985442885 NA intron (NM_007864, intron 2 of 19) intron (NM_007864, intron 2 of 19) 9637 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-2 chr1 164306836 164307417 + 0.503563708672202 NA promoter-TSS (NM_001293313) promoter-TSS (NM_001293313) 358 NM_001160209 66352 Mm.33285 NM_025505 ENSMUSG00000026577 Blzf1 1700030G05Rik|Blzf1l|Golgin-45|Jem-1 basic leucine zipper nuclear factor 1 protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-9 chrX 137037784 137038547 + 0.503563708672202 NA intron (NM_001082412, intron 1 of 6) CpG 137 NM_001082412 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202-3 chr17 80772895 80773415 + 0.503563708672202 NA Intergenic Intergenic -45130 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_57_39_0.252984926489904_5.44842055813231_0.503563708672202-2 chr6 91202414 91202799 + 0.503563708672202 NA Intergenic Intergenic -10158 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_58_39_0.277472990435317_5.46066459010502_0.503563708672202 chr1 163403640 163404039 + 0.503563708672202 NA promoter-TSS (NR_132627) promoter-TSS (NR_132627) -170 NM_178883 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding common_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202 chr14 76703603 76704281 + 0.503563708672202 NA Intergenic MER20B|DNA|hAT-Charlie 26374 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_46_48_-0.341048540813154_5.44418557370863_0.503563708672202 chr1 93671825 93672587 + 0.503563708672202 NA Intergenic PB1D10|SINE|Alu -13369 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-5 chr17 24478847 24479386 + 0.503563708672202 NA promoter-TSS (NM_001252463) promoter-TSS (NM_001252463) -38 NM_019988 56716 Mm.289516 NM_019988 ENSMUSG00000024142 Mlst8 0610033N12Rik|AA409454|AI505104|AI851821|Gbl MTOR associated protein, LST8 homolog (S. cerevisiae) protein-coding common_peak1_58_39_0.277472990435317_5.46066459010502_0.503563708672202-6 chr9 124425378 124426167 + 0.503563708672202 NA TTS (NR_027950) TTS (NR_027950) 1985 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202 chr1 121567204 121567920 + 0.503563708672202 NA intron (NM_025860, intron 1 of 12) intron (NM_025860, intron 1 of 12) 418 NM_025860 66942 Mm.44219 NM_025860 ENSMUSG00000001674 Ddx18 2310005B10Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding common_peak1_58_39_0.277472990435317_5.46066459010502_0.503563708672202-2 chr2 27304961 27305617 + 0.503563708672202 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -57986 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-4 chr15 34412076 34412607 + 0.503563708672202 NA intron (NM_001358780, intron 10 of 18) intron (NM_001358780, intron 10 of 18) 30884 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202-5 chr8 70506127 70506700 + 0.503563708672202 NA promoter-TSS (NR_151646) promoter-TSS (NR_151646) 13 NR_151646 66462 Mm.28242 NM_025577 ENSMUSG00000058833 Rex1bd 2810428I15Rik required for excision 1-B domain containing protein-coding common_peak1_58_39_0.277472990435317_5.46066459010502_0.503563708672202-4 chr7 16044038 16044722 + 0.503563708672202 NA Intergenic Intergenic -27465 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-6 chr17 68003580 68004538 + 0.503563708672202 NA promoter-TSS (NM_172964) promoter-TSS (NM_172964) 49 NM_172964 268970 Mm.9935 NM_172964 ENSMUSG00000024043 Arhgap28 AU044757|AW550892|E130310N06 Rho GTPase activating protein 28 protein-coding common_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202-2 chr17 55892062 55892350 + 0.503563708672202 NA intron (NM_145490, intron 1 of 3) CpG 113 NM_145490 224893 Mm.294853 NM_145490 ENSMUSG00000003198 Zfp959 - zinc finger protein 959 protein-coding unique_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202 chr5 134440523 134441440 + 0.503563708672202 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 15281 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202-2 chr9 88439189 88439867 + 0.503563708672202 NA promoter-TSS (NM_172926) promoter-TSS (NM_172926) -577 NM_172926 244962 Mm.439873 NM_172926 ENSMUSG00000032422 Snx14 B830022K16|C330035N22Rik|YR-14 sorting nexin 14 protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-8 chr6 85431820 85432481 + 0.503563708672202 NA intron (NM_144918, intron 1 of 12) CpG 174 NM_144918 232187 Mm.219946 NM_144918 ENSMUSG00000033706 Smyd5 AW536703|NN8-4AG|Rai15|Rrg1 SET and MYND domain containing 5 protein-coding common_peak2_46_48_-0.341048540813154_5.44418557370863_0.503563708672202-4 chr6 53730321 53731125 + 0.503563708672202 NA Intergenic Intergenic 90102 NM_025817 66873 Mm.422727 NM_025817 ENSMUSG00000043496 Tril 1200009O22Rik|AI316813|mKIAA0644 TLR4 interactor with leucine-rich repeats protein-coding common_peak2_57_39_0.252984926489904_5.44842055813231_0.503563708672202 chr3 122515075 122515613 + 0.503563708672202 NA intron (NM_013867, intron 7 of 11) intron (NM_013867, intron 7 of 11) 26337 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA common_peak2_58_39_0.277472990435317_5.46066459010502_0.503563708672202 chr10 93800118 93800700 + 0.503563708672202 NA Intergenic Intergenic -31146 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-7 chr5 103366004 103366643 + 0.503563708672202 NA Intergenic Intergenic 19725 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak1_58_39_0.277472990435317_5.46066459010502_0.503563708672202-5 chr7 139251132 139252020 + 0.503563708672202 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 3094 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_57_39_0.252984926489904_5.44842055813231_0.503563708672202-3 chr10 125974075 125975047 + 0.503563708672202 NA intron (NM_177152, intron 3 of 18) intron (NM_177152, intron 3 of 18) 8342 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding common_peak2_58_39_0.277472990435317_5.46066459010502_0.503563708672202-2 chr4 119232907 119233600 + 0.503563708672202 NA promoter-TSS (NM_001042411) promoter-TSS (NM_001042411) 338 NM_019782 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding common_peak1_58_39_0.277472990435317_5.46066459010502_0.503563708672202-3 chr6 147042611 147043313 + 0.503563708672202 NA intron (NM_145573, intron 1 of 7) CpG 192 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding common_peak1_201_183_-0.161119036372845_7.44300243787059_0.503291809282411 chr1 6286948 6289095 + 0.503291809282411 NA Intergenic Intergenic -71310 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-7 chr13 114859953 114860165 + 0.503257505534083 NA intron (NM_008396, intron 16 of 29) intron (NM_008396, intron 16 of 29) 41822 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-24 chr6 17216402 17216710 + 0.503257505534083 NA Intergenic Intergenic 18449 NR_102304 319682 Mm.136046 NR_102304 ENSMUSG00000085171 D830026I12Rik - RIKEN cDNA D830026I12 gene ncRNA common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-6 chr2 24471042 24471236 + 0.503257505534083 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 4460 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-17 chr19 41592148 41592374 + 0.503257505534083 NA Intergenic Intergenic 3610 NR_106166 102465884 NR_106166 ENSMUSG00000098286 Mir8091 Gm27575|mmu-mir-8091 microRNA 8091 ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-19 chr2 164457882 164458143 + 0.503257505534083 NA Intergenic Intergenic -2959 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-10 chr15 85564471 85564860 + 0.503257505534083 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 13405 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-12 chr17 36121695 36122060 + 0.503257505534083 NA promoter-TSS (NR_046286) promoter-TSS (NR_046286) -433 NR_046286 15024 Mm.426031 NM_010395 ENSMUSG00000079491 H2-T10 H-2T10 histocompatibility 2, T region locus 10 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-4 chr12 69461873 69462228 + 0.503257505534083 NA Intergenic Intergenic 13500 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-20 chr3 36467305 36467509 + 0.503257505534083 NA intron (NM_009673, intron 2 of 12) intron (NM_009673, intron 2 of 12) 8117 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083 chr1 164508866 164509296 + 0.503257505534083 NA intron (NR_151593, intron 2 of 2) intron (NR_151593, intron 2 of 2) 5774 NR_151593 102635083 Mm.98705 NR_151593 ENSMUSG00000097281 Gm26685 - predicted gene, 26685 ncRNA common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-13 chr6 54867267 54867491 + 0.503257505534083 NA intron (NM_199143, intron 2 of 4) intron (NM_199143, intron 2 of 4) 50463 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-32 chr8 13506412 13506750 + 0.503257505534083 NA Intergenic Intergenic -12046 NM_019521 14456 Mm.3982 NM_019521 ENSMUSG00000031451 Gas6 Gas-6 growth arrest specific 6 protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-8 chr2 21239654 21239881 + 0.503257505534083 NA Intergenic Intergenic 34043 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-8 chr14 20903526 20903802 + 0.503257505534083 NA Intergenic Intergenic -25734 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-20 chr3 104967783 104968072 + 0.503257505534083 NA Intergenic CpG -6218 NM_009520 22414 Mm.10740 NM_009520 ENSMUSG00000027840 Wnt2b Wnt13 wingless-type MMTV integration site family, member 2B protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-2 chr11 11462181 11462404 + 0.503257505534083 NA exon (NM_001185153, exon 1 of 8) exon (NM_001185153, exon 1 of 8) 127 NM_015785 53604 Mm.9500 NM_015785 ENSMUSG00000020193 Zpbp 4930486K01Rik|Iam38|Sp38 zona pellucida binding protein protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-22 chr3 142851313 142851645 + 0.503257505534083 NA intron (NM_178654, intron 2 of 21) intron (NM_178654, intron 2 of 21) 30525 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083 chr1 72451118 72451366 + 0.503257505534083 NA intron (NM_001045533, intron 2 of 3) intron (NM_001045533, intron 2 of 3) 85322 NM_001045533 381270 Mm.337023 NM_001045533 ENSMUSG00000039372 March4 BC056494|mKIAA1399 membrane-associated ring finger (C3HC4) 4 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-14 chr18 75453382 75453671 + 0.503257505534083 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -61119 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-11 chr5 5419066 5419316 + 0.503257505534083 NA Intergenic Intergenic -38940 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-14 chrX 6414906 6415120 + 0.503257505534083 NA promoter-TSS (NM_001313764) promoter-TSS (NM_001313764) -729 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-6 chr13 59659055 59659343 + 0.503257505534083 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 16585 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-3 chr10 86294739 86295089 + 0.503257505534083 NA intron (NM_001164495, intron 6 of 6) intron (NM_001164495, intron 6 of 6) -5498 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding unique_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-5 chr3 58420318 58420625 + 0.503257505534083 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 5751 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-13 chr17 63499016 63499244 + 0.503257505534083 NA exon (NM_015794, exon 1 of 9) exon (NM_015794, exon 1 of 9) 1450 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-35 chr8 121831921 121832195 + 0.503257505534083 NA Intergenic Intergenic -2489 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-9 chr3 37978910 37979103 + 0.503257505534083 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 80193 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-11 chr17 74316175 74316432 + 0.503257505534083 NA promoter-TSS (NM_001146222) promoter-TSS (NM_001146222) 91 NM_001146222 66310 Mm.28536 NM_024428 ENSMUSG00000024067 Dpy30 2810410M20Rik|C87842 dpy-30, histone methyltransferase complex regulatory subunit protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-9 chr2 57652664 57652973 + 0.503257505534083 NA Intergenic Intergenic -345337 NM_172855 241391 Mm.484118 NM_172855 ENSMUSG00000026828 Galnt5 4832424J23 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-31 chr6 145978113 145978304 + 0.503257505534083 NA Intergenic Intergenic 44086 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-2 chr13 28917202 28917400 + 0.503257505534083 NA Intergenic B1F|SINE|Alu -31879 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083 chr1 16621545 16621849 + 0.503257505534083 NA Intergenic (CAAA)n|Simple_repeat|Simple_repeat -2359 NM_001271017 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-21 chr5 64610182 64610426 + 0.503257505534083 NA intron (NR_045078, intron 1 of 3) intron (NR_045078, intron 1 of 3) 395 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-29 chr5 135522126 135522399 + 0.503257505534083 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 22860 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-3 chr12 4863948 4864213 + 0.503257505534083 NA intron (NM_001033488, intron 13 of 13) intron (NM_001033488, intron 13 of 13) 10279 NM_001033488 432628 Mm.154078 NM_001033488 ENSMUSG00000037336 Mfsd2b Gm1964 major facilitator superfamily domain containing 2B protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-13 chr9 42107932 42108256 + 0.503257505534083 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 16203 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-2 chr10 78352442 78352665 + 0.503257505534083 NA promoter-TSS (NM_053014) promoter-TSS (NM_053014) -853 NM_053014 28169 Mm.141230 NM_053014 ENSMUSG00000001211 Agpat3 AW061257|AW493985|D10Jhu12e|lpaat3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-23 chr3 151557254 151557489 + 0.503257505534083 NA Intergenic Intergenic 119489 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-15 chr2 35882320 35882659 + 0.503257505534083 NA intron (NM_029774, intron 6 of 9) intron (NM_029774, intron 6 of 9) 63299 NR_040618 77665 Mm.400558 NR_040618 ENSMUSG00000086449 9030204H09Rik - RIKEN cDNA 9030204H09 gene ncRNA common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-13 chr9 110682722 110683018 + 0.503257505534083 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 26367 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-5 chr15 70618134 70618334 + 0.503257505534083 NA Intergenic Intergenic 694001 NR_045071 100503580 Mm.404646 NR_045071 ENSMUSG00000116483 Gm19782 - predicted gene, 19782 ncRNA common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-8 chr2 154390517 154390704 + 0.503257505534083 NA intron (NM_009228, intron 2 of 7) intron (NM_009228, intron 2 of 7) 17474 NM_009228 20648 Mm.1541 NM_009228 ENSMUSG00000027488 Snta1 AW228934|Snt1 syntrophin, acidic 1 protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-3 chr15 3270806 3271007 + 0.503257505534083 NA promoter-TSS (NM_009155) promoter-TSS (NM_009155) -71 NM_009155 20363 Mm.392203 NM_009155 ENSMUSG00000064373 Selenop AU018766|D15Ucla1|Se-P|Sepp1|selp selenoprotein P protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-30 chr6 34354302 34354558 + 0.503257505534083 NA intron (NM_008012, intron 1 of 9) intron (NM_008012, intron 1 of 9) 284 NM_008012 14187 Mm.5378 NM_008012 ENSMUSG00000029762 Akr1b8 FR-1|Fgfrp|Fgrp aldo-keto reductase family 1, member B8 protein-coding unique_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-2 chr15 11837314 11837584 + 0.503257505534083 NA Intergenic Intergenic 68225 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-4 chr2 165859648 165859920 + 0.503257505534083 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) -1611 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-12 chr17 84264673 84264939 + 0.503257505534083 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -76859 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-22 chr5 123980458 123980717 + 0.503257505534083 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 6959 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-39 chrX 101640115 101640506 + 0.503257505534083 NA promoter-TSS (NM_001290535) promoter-TSS (NM_001290535) 92 NM_001290535 108155 Mm.487332 NM_139144 ENSMUSG00000034160 Ogt 1110038P24Rik|4831420N21Rik|AI115525|Ogtl O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-9 chr5 90891190 90891454 + 0.503257505534083 NA promoter-TSS (NM_008176) promoter-TSS (NM_008176) 77 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding unique_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-2 chr18 16806711 16806962 + 0.503257505534083 NA intron (NM_007664, intron 1 of 15) intron (NM_007664, intron 1 of 15) 2410 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-8 chr8 7732113 7732335 + 0.503257505534083 NA Intergenic Intergenic 928549 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-37 chr9 107956290 107956557 + 0.503257505534083 NA exon (NM_011634, exon 3 of 15) exon (NM_011634, exon 3 of 15) 5460 NM_011634 22036 Mm.297870 NM_011634 ENSMUSG00000032586 Traip Trip TRAF-interacting protein protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-27 chr8 124246071 124246433 + 0.503257505534083 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 14858 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-38 chr9 119052032 119052401 + 0.503257505534083 NA promoter-TSS (NM_001164567) promoter-TSS (NM_001164567) -562 NM_011700 22351 Mm.83817 NM_011700 ENSMUSG00000038775 Vill Villp villin-like protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-5 chr11 113062216 113062487 + 0.503257505534083 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 139487 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-4 chr16 87267524 87267842 + 0.503257505534083 NA Intergenic MER20|DNA|hAT-Charlie -86502 NM_001159331 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-13 chr18 39389081 39389344 + 0.503257505534083 NA Intergenic Intergenic 98033 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-28 chr9 63610903 63611128 + 0.503257505534083 NA intron (NR_151671, intron 1 of 9) intron (NR_151671, intron 1 of 9) 8369 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083 chr1 45597474 45597703 + 0.503257505534083 NA Intergenic Intergenic -94306 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-25 chr4 89056307 89056686 + 0.503257505534083 NA intron (NR_033533, intron 1 of 2) intron (NR_033533, intron 1 of 2) 6189 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-11 chr16 24488675 24488933 + 0.503257505534083 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -40510 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-7 chr5 90609170 90609432 + 0.503257505534083 NA intron (NM_028478, intron 5 of 10) intron (NM_028478, intron 5 of 10) 31226 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-4 chr11 98777280 98777546 + 0.503257505534083 NA Intergenic Intergenic -2036 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-36 chr9 63691244 63691559 + 0.503257505534083 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 66593 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-6 chr3 86114585 86114782 + 0.503257505534083 NA intron (NM_001082414, intron 8 of 14) intron (NM_001082414, intron 8 of 14) 24175 NR_004417 19870 NR_004417 ENSMUSG00000064984 Snord73a Rnu73a|U73a small nucleolar RNA, C/D box U73A snoRNA unique_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-4 chr2 60809294 60809571 + 0.503257505534083 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) 72006 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-17 chr2 69822821 69823142 + 0.503257505534083 NA 5' UTR (NM_001360394, exon 1 of 4) 5' UTR (NM_001360394, exon 1 of 4) 140 NM_001360394 277396 Mm.138073 NM_177784 ENSMUSG00000042155 Klhl23 C130068N17Rik kelch-like 23 protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-2 chr11 50025427 50025671 + 0.503257505534083 NA exon (NM_001290749, exon 1 of 8) exon (NM_001290749, exon 1 of 8) 218 NM_001290750 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-5 chr17 26939983 26940193 + 0.503257505534083 NA promoter-TSS (NM_026307) promoter-TSS (NM_026307) -550 NM_026307 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-12 chr9 27191644 27192021 + 0.503257505534083 NA Intergenic Intergenic -36411 NM_023277 83964 Mm.28770 NM_023277 ENSMUSG00000031990 Jam3 1110002N23Rik|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-2 chr10 60575635 60575964 + 0.503257505534083 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 120691 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-29 chr9 70265777 70266176 + 0.503257505534083 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 58626 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-6 chr4 134660938 134661206 + 0.503257505534083 NA intron (NM_207237, intron 1 of 11) RSINE1|SINE|B4 43218 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083 chr10 43690380 43690579 + 0.503257505534083 NA Intergenic Intergenic -55679 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-10 chr2 59203303 59203529 + 0.503257505534083 NA intron (NM_175464, intron 1 of 20) intron (NM_175464, intron 1 of 20) 42566 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-25 chr8 44987792 44988172 + 0.503257505534083 NA intron (NM_001081286, intron 1 of 25) intron (NM_001081286, intron 1 of 25) 37774 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-7 chr4 149780381 149780619 + 0.503257505534083 NA Intergenic Intergenic -6233 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-10 chr15 103241721 103242077 + 0.503257505534083 NA intron (NM_001039129, intron 3 of 10) intron (NM_001039129, intron 3 of 10) 1445 NR_002883 434858 Mm.391346 NR_002883 Gm5643 EG434858 heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-4 chr17 17792082 17792350 + 0.503257505534083 NA Intergenic Intergenic -37972 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-18 chr2 52676196 52676467 + 0.503257505534083 NA promoter-TSS (NM_001285426) promoter-TSS (NM_001285426) -188 NM_001285426 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083 chr11 120311170 120311460 + 0.503257505534083 NA Intergenic CpG 36098 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-11 chr9 25244806 25245306 + 0.503257505534083 NA Intergenic Intergenic -6935 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-26 chr4 150784939 150785261 + 0.503257505534083 NA Intergenic Intergenic -68696 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-11 chr7 84504856 84505084 + 0.503257505534083 NA Intergenic Intergenic -23984 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-7 chr13 51761169 51761477 + 0.503257505534083 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 32424 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-3 chr19 59339515 59339851 + 0.503257505534083 NA intron (NM_001033222, intron 1 of 4) intron (NM_001033222, intron 1 of 4) 6097 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-21 chr3 68477441 68477650 + 0.503257505534083 NA intron (NM_001282045, intron 1 of 7) intron (NM_001282045, intron 1 of 7) 9362 NM_001282045 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-9 chr14 76785840 76786269 + 0.503257505534083 NA Intergenic Intergenic 25923 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-34 chr8 113876657 113877052 + 0.503257505534083 NA Intergenic Intergenic -28015 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-9 chr9 50554944 50555168 + 0.503257505534083 NA promoter-TSS (NM_133217) promoter-TSS (NM_133217) 82 NM_133217 170752 Mm.390149 NM_133217 ENSMUSG00000032066 Bco2 B-diox-II|Bcdo2|Bcmo2|CMO2 beta-carotene oxygenase 2 protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-8 chr4 156236134 156236343 + 0.503257505534083 NA exon (NM_021303, exon 2 of 19) exon (NM_021303, exon 2 of 19) 228 NM_021303 57741 Mm.423051 NM_021303 ENSMUSG00000095567 Noc2l AA410003|AF155546|NIR NOC2 like nucleolar associated transcriptional repressor protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083 chr11 7130049 7130376 + 0.503257505534083 NA intron (NM_009622, intron 4 of 19) intron (NM_009622, intron 4 of 19) 58357 NR_045101 100041347 Mm.300962 NR_045101 ENSMUSG00000087512 Gm11985 - predicted gene 11985 ncRNA unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-26 chr8 103235098 103235502 + 0.503257505534083 NA Intergenic Intergenic 112234 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083 chr11 48991694 48991895 + 0.503257505534083 NA intron (NM_011579, intron 1 of 1) intron (NM_011579, intron 1 of 1) 452 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-28 chr5 122502577 122502969 + 0.503257505534083 NA promoter-TSS (NM_009722) promoter-TSS (NM_009722) -548 NR_027838 11938 Mm.227583 NM_009722 ENSMUSG00000029467 Atp2a2 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|Serca2a|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-5 chr17 21909407 21909692 + 0.503257505534083 NA intron (NM_001256493, intron 1 of 4) intron (NM_001256493, intron 1 of 4) 377 NM_001256493 70081 Mm.245648 NM_001256493 ENSMUSG00000078546 Zfp995 2210404O09Rik zinc finger protein 995 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-19 chr2 84537518 84538026 + 0.503257505534083 NA Intergenic Intergenic -30899 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-27 chr5 92837638 92837987 + 0.503257505534083 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 28430 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-10 chr6 85137392 85137608 + 0.503257505534083 NA exon (NM_011467, exon 1 of 3) exon (NM_011467, exon 1 of 3) 264 NM_011467 20751 Mm.28393 NM_011467 ENSMUSG00000033735 Spr AA409688|Gm10328 sepiapterin reductase protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-6 chr12 25096643 25096899 + 0.503257505534083 NA promoter-TSS (NM_010496) promoter-TSS (NM_010496) -679 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-9 chr15 95825210 95825468 + 0.503257505534083 NA intron (NR_155276, intron 1 of 1) intron (NR_155276, intron 1 of 1) 4733 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-10 chr7 89667209 89667460 + 0.503257505534083 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 34516 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-14 chr18 24653921 24654177 + 0.503257505534083 NA exon (NM_026779, exon 1 of 15) exon (NM_026779, exon 1 of 15) 358 NM_026779 68591 Mm.28252 NM_026779 ENSMUSG00000039616 Mocos 1110018O12Rik|HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-18 chr2 154734960 154735359 + 0.503257505534083 NA Intergenic Intergenic -55951 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-6 chr18 36511533 36511816 + 0.503257505534083 NA intron (NM_010415, intron 3 of 5) intron (NM_010415, intron 3 of 5) 4131 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-16 chr2 51934848 51935140 + 0.503257505534083 NA promoter-TSS (NM_001141982) promoter-TSS (NM_001141982) 169 NM_030243 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-8 chr15 79028591 79028858 + 0.503257505534083 NA exon (NM_008197, exon 1 of 1) exon (NM_008197, exon 1 of 1) 512 NM_008197 14958 Mm.24350 NM_008197 ENSMUSG00000096210 H1f0 D130017D06Rik|H1(0)|H1fv H1 histone family, member 0 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-16 chr18 60605653 60605987 + 0.503257505534083 NA intron (NM_177340, intron 1 of 2) B1_Mus1|SINE|Alu 4284 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-7 chr2 122145932 122146164 + 0.503257505534083 NA intron (NM_026251, intron 2 of 17) intron (NM_026251, intron 2 of 17) -1639 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-4 chr15 64325761 64326039 + 0.503257505534083 NA intron (NM_001276461, intron 2 of 28) intron (NM_001276461, intron 2 of 28) -13227 NM_001276463 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-12 chr8 12995231 12995503 + 0.503257505534083 NA intron (NM_001159486, intron 5 of 29) intron (NM_001159486, intron 5 of 29) -30667 NM_010172 14068 Mm.4827 NM_010172 ENSMUSG00000031443 F7 AI132620|Cf7|FVII coagulation factor VII protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-24 chr4 48579557 48579891 + 0.503257505534083 NA Intergenic Intergenic -5450 NM_001356272 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding unique_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-3 chr17 47754053 47754256 + 0.503257505534083 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) 16223 NM_001161723 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-5 chr3 41182113 41182381 + 0.503257505534083 NA Intergenic Intergenic -99201 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-15 chr18 36320308 36320531 + 0.503257505534083 NA Intergenic CpG 20318 NM_001267796 109169 Mm.426423 NM_001267796 ENSMUSG00000110185 Igip 6330403M23Rik IgA inducing protein protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-3 chr16 13818873 13819118 + 0.503257505534083 NA promoter-TSS (NM_010946) promoter-TSS (NM_010946) -256 NM_010946 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-5 chr13 41709356 41709614 + 0.503257505534083 NA Intergenic Intergenic 103269 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_18_11_0.391255933397236_3.78059046741977_0.503257505534083-33 chr8 110941929 110942232 + 0.503257505534083 NA intron (NM_009179, intron 1 of 6) B2_Mm2|SINE|B2 22215 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-12 chr5 104374764 104375022 + 0.503257505534083 NA Intergenic Intergenic 49564 NM_053172 94111 Mm.196672 NM_053172 ENSMUSG00000053863 Mepe Of45 matrix extracellular phosphoglycoprotein with ASARM motif (bone) protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-7 chr2 13385402 13385635 + 0.503257505534083 NA intron (NM_001081084, intron 29 of 66) intron (NM_001081084, intron 29 of 66) 106358 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-2 chr15 97256774 97257018 + 0.503257505534083 NA intron (NM_172293, intron 1 of 5) intron (NM_172293, intron 1 of 5) -9609 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding unique_peak2_12_16_-0.654869687221981_3.76002799763935_0.503257505534083-23 chr5 145130687 145131050 + 0.503257505534083 NA intron (NM_001033313, intron 5 of 5) intron (NM_001033313, intron 5 of 5) 9221 NM_001033313 231887 Mm.188851 NM_001033313 ENSMUSG00000029623 Pdap1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding common_peak2_18_11_0.391255933397236_3.78059046741977_0.503257505534083-3 chr14 120478819 120479056 + 0.503257505534083 NA exon (NM_029519, exon 1 of 2) exon (NM_029519, exon 1 of 2) 476 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak2_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-2 chr16 64850926 64851682 + 0.502380543067039 NA promoter-TSS (NM_001357416) promoter-TSS (NM_001357416) 419 NM_001347245 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak1_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-3 chr2 26603558 26604330 + 0.502380543067039 NA intron (NM_026212, intron 1 of 5) CpG 473 NM_026212 67512 Mm.24244 NM_026212 ENSMUSG00000026922 Agpat2 2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) protein-coding common_peak1_71_49_0.240800079324736_5.76425622943709_0.502380543067039-4 chr3 88325093 88325725 + 0.502380543067039 NA intron (NM_020003, intron 1 of 5) intron (NM_020003, intron 1 of 5) 386 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding common_peak2_71_49_0.240800079324736_5.76425622943709_0.502380543067039 chr17 33778976 33780389 + 0.502380543067039 NA intron (NM_020581, intron 3 of 6) intron (NM_020581, intron 3 of 6) 1893 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak1_71_49_0.240800079324736_5.76425622943709_0.502380543067039-3 chr15 99399360 99400551 + 0.502380543067039 NA intron (NM_001171034, intron 2 of 10) intron (NM_001171034, intron 2 of 10) 6736 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-5 chr7 34389828 34390233 + 0.502380543067039 NA promoter-TSS (NM_001360654) promoter-TSS (NM_001360654) -325 NM_025948 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak2_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-5 chr9 64281614 64282177 + 0.502380543067039 NA intron (NM_001324558, intron 1 of 7) CpG 310 NM_001324557 66131 Mm.196219 NM_025372 ENSMUSG00000032397 Tipin 1110005A05Rik|1110018P21Rik timeless interacting protein protein-coding common_peak1_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-2 chr17 45433094 45433603 + 0.502380543067039 NA promoter-TSS (NR_130960) promoter-TSS (NR_130960) 359 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak1_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-6 chr8 45001892 45002579 + 0.502380543067039 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 52027 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_59_59_-0.283413029982634_5.7651840806172_0.502380543067039 chr1 151065135 151066242 + 0.502380543067039 NA Intergenic Intergenic -72253 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak2_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-3 chr7 19629015 19629392 + 0.502380543067039 NA exon (NM_009046, exon 1 of 11) exon (NM_009046, exon 1 of 11) 235 NM_001290457 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding common_peak2_71_49_0.240800079324736_5.76425622943709_0.502380543067039-2 chr6 11925669 11926686 + 0.502380543067039 NA 5' UTR (NM_029404, exon 1 of 17) 5' UTR (NM_029404, exon 1 of 17) 296 NM_001168382 75725 Mm.212411 NM_029404 ENSMUSG00000029629 Phf14 1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783 PHD finger protein 14 protein-coding common_peak1_71_49_0.240800079324736_5.76425622943709_0.502380543067039 chr10 23178205 23179433 + 0.502380543067039 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 171071 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-4 chr3 87919126 87920051 + 0.502380543067039 NA promoter-TSS (NM_026591) promoter-TSS (NM_026591) 44 NM_026591 67707 Mm.393802 NM_026591 ENSMUSG00000019710 Mrpl24 2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670 mitochondrial ribosomal protein L24 protein-coding common_peak2_59_59_-0.283413029982634_5.7651840806172_0.502380543067039-4 chr7 34389823 34390290 + 0.502380543067039 NA promoter-TSS (NM_001360654) promoter-TSS (NM_001360654) -351 NM_025948 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak1_59_59_-0.283413029982634_5.7651840806172_0.502380543067039 chr10 94147969 94148432 + 0.502380543067039 NA intron (NM_011629, intron 1 of 13) CpG 269 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding common_peak1_71_49_0.240800079324736_5.76425622943709_0.502380543067039-2 chr15 44427232 44427805 + 0.502380543067039 NA promoter-TSS (NM_175009) promoter-TSS (NM_175009) -593 NM_175009 223527 Mm.291828 NM_175009 ENSMUSG00000022338 Eny2 1810057B09Rik|6720481I12|DC6|Ey2 ENY2 transcription and export complex 2 subunit protein-coding common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663-4 chr19 42080489 42081019 + 0.502376547007663 NA intron (NM_198108, intron 1 of 4) intron (NM_198108, intron 1 of 4) 5616 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding unique_peak1_27_30_-0.42249721659495_4.7429477020894_0.502376547007663 chr13 97137551 97137798 + 0.502376547007663 NA promoter-TSS (NM_001271464) promoter-TSS (NM_001271464) 252 NM_021552 59050 Mm.390634 NM_021552 ENSMUSG00000060739 Nsa2 5730427N09Rik|LNR42|Nsa2p|Tinp1|Yr29 NSA2 ribosome biogenesis homolog protein-coding common_peak1_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-2 chr16 91688397 91688702 + 0.502376547007663 NA promoter-TSS (NR_040389) promoter-TSS (NR_040389) 179 NM_021720 60364 Mm.328698 NM_021720 ENSMUSG00000022960 Donson 1110025J21Rik|AI845729|ORF60 downstream neighbor of SON protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-7 chr3 144506654 144507080 + 0.502376547007663 NA intron (NM_001355234, intron 1 of 6) intron (NM_001355234, intron 1 of 6) 63349 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663-7 chr9 110656498 110656811 + 0.502376547007663 NA exon (NM_028312, exon 1 of 7) exon (NM_028312, exon 1 of 7) 151 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-3 chr15 55265678 55266174 + 0.502376547007663 NA Intergenic Intergenic -41824 NM_181277 12818 Mm.297859 NM_181277 ENSMUSG00000022371 Col14a1 5730412L22Rik|AW108078 collagen, type XIV, alpha 1 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-6 chr18 35498588 35498881 + 0.502376547007663 NA intron (NM_030749, intron 1 of 9) CpG 191 NM_030749 81500 Mm.291482 NM_030749 ENSMUSG00000024357 Sil1 1810057E01Rik|AI042831|wz endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein-coding common_peak1_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-3 chr4 109662171 109662649 + 0.502376547007663 NA intron (NM_007671, intron 1 of 1) intron (NM_007671, intron 1 of 1) 2962 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-11 chr8 33815199 33815710 + 0.502376547007663 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -67684 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-8 chr6 52192026 52192394 + 0.502376547007663 NA promoter-TSS (NM_008265) promoter-TSS (NM_008265) -507 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding unique_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-2 chr14 50807915 50808237 + 0.502376547007663 NA promoter-TSS (NR_002142) promoter-TSS (NR_002142) 160 NM_009632 11546 Mm.281482 NM_009632 ENSMUSG00000036023 Parp2 ADPRT-2|ARTD2|Adprt2|Adprtl2|Aspartl2|C78626|PARP-2|mPARP-2|pADPRT-2 poly (ADP-ribose) polymerase family, member 2 protein-coding common_peak1_27_30_-0.42249721659495_4.7429477020894_0.502376547007663 chr10 60206989 60207388 + 0.502376547007663 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 12072 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-7 chr2 153139947 153140580 + 0.502376547007663 NA intron (NM_001172117, intron 10 of 12) L2c|LINE|L2 -21038 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-9 chr4 126111814 126112413 + 0.502376547007663 NA intron (NM_028800, intron 1 of 10) MIRb|SINE|MIR 8156 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663 chr16 34825760 34826234 + 0.502376547007663 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 41047 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-5 chr17 80807476 80808009 + 0.502376547007663 NA Intergenic B1_Mus1|SINE|Alu -79717 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-3 chr13 3537392 3537723 + 0.502376547007663 NA promoter-TSS (NM_008112) promoter-TSS (NM_008112) -518 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663 chr1 136717310 136717910 + 0.502376547007663 NA intron (NR_037986, intron 2 of 4) intron (NR_037986, intron 2 of 4) 21399 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-2 chr15 41399849 41400373 + 0.502376547007663 NA Intergenic Intergenic -47371 NR_152565 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663 chr12 112576036 112576404 + 0.502376547007663 NA Intergenic Intergenic -12564 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-4 chr16 34573725 34574120 + 0.502376547007663 NA Intergenic CpG -59895 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663 chr1 34111103 34111559 + 0.502376547007663 NA intron (NM_001276764, intron 5 of 102) intron (NM_001276764, intron 5 of 102) -6028 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-9 chr6 124829653 124830010 + 0.502376547007663 NA promoter-TSS (NM_001326594) promoter-TSS (NM_001326594) -345 NM_013538 14793 Mm.285723 NM_013538 ENSMUSG00000023505 Cdca3 2410005A12Rik|C8|Grcc8|Tome-1 cell division cycle associated 3 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-12 chr9 20972377 20972784 + 0.502376547007663 NA intron (NM_010333, intron 1 of 1) intron (NM_010333, intron 1 of 1) 4213 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-2 chr11 114852964 114853302 + 0.502376547007663 NA intron (NM_147217, intron 1 of 3) intron (NM_147217, intron 1 of 3) 1103 NM_147217 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663 chr12 112722322 112722591 + 0.502376547007663 NA intron (NM_001024602, intron 1 of 18) CpG 282 NM_001024602 217882 Mm.23689 NM_001024602 ENSMUSG00000072825 Cep170b AI466840|AW555464|Kiaa0284|mKIAA0284 centrosomal protein 170B protein-coding common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663-5 chr2 35461838 35462212 + 0.502376547007663 NA promoter-TSS (NM_001145821) promoter-TSS (NM_001145821) -576 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-5 chr17 75809057 75809747 + 0.502376547007663 NA Intergenic Intergenic -51621 NR_033456 100043885 Mm.127562 NR_033456 Gm4710 - predicted gene 4710 ncRNA common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663-6 chr5 145115926 145116254 + 0.502376547007663 NA intron (NM_023142, intron 1 of 9) intron (NM_023142, intron 1 of 9) 1834 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-4 chr14 42794777 42795311 + 0.502376547007663 NA intron (NM_001244671, intron 3 of 4).2 intron (NM_001244671, intron 3 of 4).2 2891 NM_001244671 100042055 Mm.429109 NM_001244671 ENSMUSG00000095226 Gm10377 - predicted gene 10377 protein-coding common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663-2 chr14 34088126 34088598 + 0.502376547007663 NA intron (NM_013473, intron 1 of 11) intron (NM_013473, intron 1 of 11) 2383 NM_013473 11752 Mm.3267 NM_013473 ENSMUSG00000021950 Anxa8 AI466995|Anx8 annexin A8 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-10 chr5 3346184 3346784 + 0.502376547007663 NA intron (NM_009873, intron 2 of 7) intron (NM_009873, intron 2 of 7) 2591 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-2 chr17 34850456 34850911 + 0.502376547007663 NA promoter-TSS (NM_021337) promoter-TSS (NM_021337) 292 NM_001045864 27632 Mm.653 NM_138580 ENSMUSG00000024369 Nelfe D17H6S45|NELF-E|RD|Rdbp negative elongation factor complex member E, Rdbp protein-coding common_peak2_35_23_0.306748747951548_4.73833687469693_0.502376547007663-3 chr15 76671668 76671878 + 0.502376547007663 NA intron (NR_152559, intron 1 of 8) CpG 130 NM_033371 73062 Mm.322901 NM_033371 ENSMUSG00000033819 Ppp1r16a 2900084E10Rik|Mypt3|R75527 protein phosphatase 1, regulatory (inhibitor) subunit 16A protein-coding common_peak2_27_30_-0.42249721659495_4.7429477020894_0.502376547007663-6 chr18 35837166 35837539 + 0.502376547007663 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 7038 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_35_23_0.306748747951548_4.73833687469693_0.502376547007663-8 chr4 35157024 35157419 + 0.502376547007663 NA intron (NM_178061, intron 1 of 3) CpG 263 NM_178061 214944 Mm.32968 NM_178061 ENSMUSG00000073910 Mob3b 8430436F23Rik|A430018A01Rik|Mobkl2b MOB kinase activator 3B protein-coding common_peak2_138_129_-0.195390761645368_6.92467243220577_0.502220138582521 chr9 25150872 25151757 + 0.502220138582521 NA 5' UTR (NM_020586, exon 1 of 8) 5' UTR (NM_020586, exon 1 of 8) 467 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak1_139_129_-0.185121779629139_6.92980692321389_0.502220138582521 chr8 120494479 120495740 + 0.502220138582521 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 6243 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_139_129_-0.185121779629139_6.92980692321389_0.502220138582521 chr10 42761538 42762856 + 0.502220138582521 NA intron (NM_001359285, intron 1 of 19) CpG 701 NM_153055 140740 Mm.214344 NM_153055 ENSMUSG00000019802 Sec63 5730478J10Rik|AI649014|AW319215 SEC63-like (S. cerevisiae) protein-coding common_peak2_157_114_0.165022635757658_6.9280013688232_0.502220138582521 chr9 63720800 63721735 + 0.502220138582521 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 36727 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_397_299_0.105134682278829_8.2813860316353_0.502168042921968 chr8 46740172 46742143 + 0.502168042921968 NA intron (NR_152560, intron 1 of 7) CpG 1412 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_203_184_-0.154824960098894_7.45396898046686_0.502135003864754 chr15 66894287 66895644 + 0.502135003864754 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 3572 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_120_113_-0.204579253188417_6.73060038757053_0.501934938316613 chr1 171294263 171295311 + 0.501934938316613 NA 5' UTR (NM_001360931, exon 2 of 7) 5' UTR (NM_001360931, exon 2 of 7) 215 NM_001360932 66155 Mm.2815 NM_025388 ENSMUSG00000062963 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 protein-coding common_peak1_86_60_0.225011286041834_6.0432429805838_0.501837478813393-2 chr19 46395316 46395727 + 0.501837478813393 NA intron (NM_016860, intron 1 of 10) CpG 214 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding common_peak1_86_60_0.225011286041834_6.0432429805838_0.501837478813393 chr17 69156574 69157637 + 0.501837478813393 NA intron (NM_013813, intron 1 of 21) CpG 361 NM_013813 13823 Mm.131135 NM_013813 ENSMUSG00000024044 Epb41l3 4.1B|DAL1P|Dal1|Epb4.1l3|NBL3 erythrocyte membrane protein band 4.1 like 3 protein-coding common_peak1_86_60_0.225011286041834_6.0432429805838_0.501837478813393-3 chr19 46599216 46599922 + 0.501837478813393 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 463 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak2_72_71_-0.265509565876386_6.03717021850412_0.501837478813381 chr13 3610150 3610986 + 0.501837478813381 NA intron (NM_001360838, intron 1 of 19) CpG 540 NM_134063 105203 Mm.221609 NM_134063 ENSMUSG00000033799 Fam208b AI645998|Pap20|mKIAA2006 family with sequence similarity 208, member B protein-coding common_peak2_72_71_-0.265509565876386_6.03717021850412_0.501837478813381-2 chr17 25941528 25942174 + 0.501837478813381 NA TTS (NM_001039038) TTS (NM_001039038) 138 NM_001357592 14755 Mm.362054 NM_011822 ENSMUSG00000025728 Pigq Gpi1|Gpi1h|Gpi1p|Gpih phosphatidylinositol glycan anchor biosynthesis, class Q protein-coding common_peak1_72_71_-0.265509565876386_6.03717021850412_0.501837478813381 chr9 102763875 102764339 + 0.501837478813381 NA Intergenic Intergenic 24459 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_72_71_-0.265509565876386_6.03717021850412_0.501837478813381-3 chr2 13404436 13405325 + 0.501837478813381 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 86996 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_103_98_-0.217928404770985_6.52039241769412_0.501733885083345 chr15 86213906 86214912 + 0.501733885083345 NA promoter-TSS (NM_145476) promoter-TSS (NM_145476) -50 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak1_87_84_-0.237270513113886_6.29075567958076_0.501671748198386 chr4 94978802 94979679 + 0.501671748198386 NA promoter-TSS (NM_177239) promoter-TSS (NM_177239) -140 NM_177239 320713 Mm.208868 NM_177239 ENSMUSG00000062627 Mysm1 C130067A03Rik|C530050H10Rik myb-like, SWIRM and MPN domains 1 protein-coding common_peak2_87_84_-0.237270513113886_6.29075567958076_0.501671748198386-2 chr5 124439968 124441057 + 0.501671748198386 NA intron (NM_001310725, intron 1 of 6) intron (NM_001310725, intron 1 of 6) 582 NM_001310725 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_102_72_0.207762806178209_6.29370596196912_0.501671748198386-2 chr18 46596724 46597544 + 0.501671748198386 NA promoter-TSS (NM_010120) promoter-TSS (NM_010120) 401 NM_025698 66676 Mm.296043 NM_025698 ENSMUSG00000033184 Tmed7 3930401E15Rik|5830493P14Rik|AU044611|AW545765|TRAM transmembrane p24 trafficking protein 7 protein-coding common_peak1_102_72_0.207762806178209_6.29370596196912_0.501671748198386 chr17 35869775 35870640 + 0.501671748198386 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 3592 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak2_87_84_-0.237270513113886_6.29075567958076_0.501671748198386 chr15 43282278 43282696 + 0.501671748198386 NA intron (NM_008388, intron 1 of 12) CpG 249 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak1_87_84_-0.237270513113886_6.29075567958076_0.501671748198386-2 chr9 20887942 20888699 + 0.501671748198386 NA intron (NM_145610, intron 1 of 10) CpG 145 NM_145610 235036 Mm.2930 NM_145610 ENSMUSG00000004100 Ppan A230087P06Rik|SSF1 peter pan homolog protein-coding common_peak1_102_72_0.207762806178209_6.29370596196912_0.501671748198386-3 chr18 60560514 60561470 + 0.501671748198386 NA intron (NM_025776, intron 1 of 10) CpG 206 NM_025776 66810 Mm.275106 NM_025776 ENSMUSG00000024604 Rbm22 8430430L24Rik RNA binding motif protein 22 protein-coding common_peak2_202_148_0.150348570915991_7.29434280592016_0.501625660199937 chr19 47313898 47315312 + 0.501625660199937 NA intron (NM_008018, intron 7 of 14) intron (NM_008018, intron 7 of 14) -41016 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA common_peak1_140_130_-0.185981075581185_6.94043246374686_0.500575704582984 chr15 86169429 86170676 + 0.500575704582984 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) -15676 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak2_140_130_-0.185981075581185_6.94043246374686_0.500575704582984 chr8 120494463 120495734 + 0.500575704582984 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 6232 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_203_149_0.147737809921537_7.30268759545665_0.500350794171882 chr8 86883864 86885090 + 0.500350794171882 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 781 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_182_166_-0.162767600516966_7.30232049221557_0.500350794171882 chr5 31630319 31631465 + 0.500350794171882 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 16941 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_308_230_0.11961894629638_7.91155851456425_0.50018255001277 chr8 122140078 122142941 + 0.50018255001277 NA Intergenic Intergenic -140632 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_588_506_-0.0903789462696949_8.94065246386849_0.500075746801864 chr15 77881958 77884288 + 0.500075746801864 NA Intergenic Intergenic -40948 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_139_100_0.179034550647521_6.74772875807555_0.500054623387009-2 chr11 119491120 119492091 + 0.500054623387009 NA promoter-TSS (NR_153849) promoter-TSS (NR_153849) -15 NM_177394 338371 Mm.271946 NM_177394 ENSMUSG00000039850 Endov A730011L01Rik endonuclease V protein-coding common_peak1_139_100_0.179034550647521_6.74772875807555_0.500054623387009 chr10 59879556 59880570 + 0.500054623387009 NA intron (NM_019965, intron 1 of 8) intron (NM_019965, intron 1 of 8) 472 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_37_39_-0.352764640342215_5.14554577471625_0.499999074040597 chr17 53567290 53568052 + 0.499999074040597 NA intron (NR_151733, intron 1 of 16) CpG 700 NR_151733 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597 chr10 80589833 80590258 + 0.499999074040597 NA intron (NM_145421, intron 1 of 4) CpG 296 NM_145421 216169 Mm.29802 NM_145421 ENSMUSG00000003346 Abhd17a 1700013O15Rik|BC005632|D10Bwg1364e|Fam108a abhydrolase domain containing 17A protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-2 chr11 3371507 3372295 + 0.499999074040597 NA promoter-TSS (NM_001361623) promoter-TSS (NM_001361623) -497 NM_173053 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-4 chr17 25016180 25016956 + 0.499999074040597 NA 5' UTR (NM_134126, exon 1 of 30) 5' UTR (NM_134126, exon 1 of 30) 482 NM_134126 106633 Mm.32802 NM_134126 ENSMUSG00000024169 Ift140 AI661311|Tce5|Wdtc2|mKIAA0590 intraflagellar transport 140 protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-5 chr15 85879353 85879865 + 0.499999074040597 NA intron (NM_028063, intron 1 of 10) intron (NM_028063, intron 1 of 10) 282 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak2_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-2 chr10 16499077 16499792 + 0.499999074040597 NA Intergenic Intergenic 596348 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-3 chr11 98940018 98940764 + 0.499999074040597 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 680 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-4 chr11 120316320 120316732 + 0.499999074040597 NA Intergenic Intergenic 30887 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-4 chr13 34408074 34408499 + 0.499999074040597 NA Intergenic Intergenic -63104 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-3 chr11 103953506 103953986 + 0.499999074040597 NA intron (NM_008740, intron 1 of 20) intron (NM_008740, intron 1 of 20) 310 NM_008740 18195 Mm.260117 NM_008740 ENSMUSG00000034187 Nsf AI316878|AU020090|AU067812|SKD2 N-ethylmaleimide sensitive fusion protein protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-6 chr19 34192210 34192620 + 0.499999074040597 NA promoter-TSS (NM_001360717) promoter-TSS (NM_001360717) 186 NM_029682 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak2_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-6 chr9 92276735 92277423 + 0.499999074040597 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 1477 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak1_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-6 chr9 56227195 56227936 + 0.499999074040597 NA exon (NM_172924, exon 6 of 7) exon (NM_172924, exon 6 of 7) -66495 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_36_39_-0.390967353829921_5.1264444179724_0.499999074040597 chr1 24678772 24679049 + 0.499999074040597 NA promoter-TSS (NM_001310483) promoter-TSS (NM_001310483) -8 NM_001310483 68421 Mm.336563 NM_026719 ENSMUSG00000073725 Lmbrd1 0910001K20Rik|AV347960 LMBR1 domain containing 1 protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-7 chr2 155592331 155592693 + 0.499999074040597 NA intron (NM_008180, intron 1 of 12) CpG 298 NM_001291111 14854 Mm.252316 NM_008180 ENSMUSG00000027610 Gss AI314904|GS-A/GS-B|GSH-S glutathione synthetase protein-coding common_peak2_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-5 chr8 68102707 68103243 + 0.499999074040597 NA Intergenic Intergenic -128401 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-5 chr15 6412311 6412822 + 0.499999074040597 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 25818 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-8 chr4 155582758 155583279 + 0.499999074040597 NA intron (NM_001355599, intron 2 of 10) intron (NM_001355599, intron 2 of 10) -18398 NM_177186 320541 Mm.306018 NM_177186 ENSMUSG00000042202 Slc35e2 A530082C11Rik|AI957035 solute carrier family 35, member E2 protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-9 chr5 140704478 140704760 + 0.499999074040597 NA promoter-TSS (NM_001276287) promoter-TSS (NM_001276287) -392 NM_181066 231841 Mm.271932 NM_172724 ENSMUSG00000000148 Brat1 AA881470|Baat1 BRCA1-associated ATM activator 1 protein-coding common_peak2_37_39_-0.352764640342215_5.14554577471625_0.499999074040597 chr1 79775854 79776485 + 0.499999074040597 NA exon (NM_001081210, exon 1 of 4) exon (NM_001081210, exon 1 of 4) 151 NM_001081210 69163 Mm.238455 NM_001081210 ENSMUSG00000026248 Mrpl44 1810030E18Rik|5730593H20Rik|AI463302 mitochondrial ribosomal protein L44 protein-coding common_peak2_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-10 chr8 121229904 121230213 + 0.499999074040597 NA Intergenic Intergenic 102373 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-3 chr7 112644166 112644760 + 0.499999074040597 NA Intergenic Intergenic -34857 NM_001166584 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak2_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-3 chr10 60579101 60579957 + 0.499999074040597 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 116961 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding common_peak1_36_39_-0.390967353829921_5.1264444179724_0.499999074040597-2 chr10 111972774 111973072 + 0.499999074040597 NA intron (NM_178610, intron 1 of 9) CpG 228 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak1_37_39_-0.352764640342215_5.14554577471625_0.499999074040597-2 chr4 155492182 155492619 + 0.499999074040597 NA intron (NM_001160017, intron 1 of 10) CpG 1039 NM_001160016 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding common_peak1_46_31_0.273661303302054_5.13683065165103_0.499999074040591-2 chr12 75734855 75735594 + 0.499999074040591 NA exon (NM_030750, exon 1 of 3) exon (NM_030750, exon 1 of 3) 505 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak2_46_31_0.273661303302054_5.13683065165103_0.499999074040591 chr14 57291857 57292377 + 0.499999074040591 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 106366 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak2_46_31_0.273661303302054_5.13683065165103_0.499999074040591-2 chr14 120911252 120911931 + 0.499999074040591 NA intron (NM_023579, intron 1 of 25) CpG 397 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5 importin 5 protein-coding common_peak1_46_31_0.273661303302054_5.13683065165103_0.499999074040591 chr11 49052245 49052771 + 0.499999074040591 NA Intergenic Intergenic -1266 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_46_31_0.273661303302054_5.13683065165103_0.499999074040591-4 chr6 83017515 83017962 + 0.499999074040591 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 15733 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak2_46_31_0.273661303302054_5.13683065165103_0.499999074040591-3 chr6 92480516 92481199 + 0.499999074040591 NA 5' UTR (NM_001134460, exon 1 of 8) 5' UTR (NM_001134460, exon 1 of 8) 535 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak1_46_31_0.273661303302054_5.13683065165103_0.499999074040591-3 chr15 13288678 13289228 + 0.499999074040591 NA Intergenic Intergenic -115278 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_181_132_0.157804829381565_7.13418485019197_0.49967280338316 chr18 50061351 50062749 + 0.49967280338316 NA intron (NM_134131, intron 1 of 1) intron (NM_134131, intron 1 of 1) -8388 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak2_181_132_0.157804829381565_7.13418485019197_0.49967280338316-2 chr8 124862512 124863525 + 0.49967280338316 NA promoter-TSS (NM_025615) promoter-TSS (NM_025615) 11 NM_025615 66523 Mm.436864 NM_025615 ENSMUSG00000031984 2810004N23Rik 3110004G14Rik|Ayu21-55|Gt(pU21)55Imeg|GtAyu21-55 RIKEN cDNA 2810004N23 gene protein-coding common_peak1_181_132_0.157804829381565_7.13418485019197_0.49967280338316 chr7 133793846 133795185 + 0.49967280338316 NA intron (NM_025850, intron 1 of 10) intron (NM_025850, intron 1 of 10) -11730 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak2_161_148_-0.172841046907791_7.13274799700827_0.49967280338316 chr8 84983562 84984683 + 0.49967280338316 NA Intergenic Intergenic -5374 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_589_507_-0.0907916414153398_8.9432888660645_0.49967105671718 chr15 77881948 77884282 + 0.49967105671718 NA Intergenic Intergenic -40940 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_120_86_0.185367265127597_6.53562712841253_0.499560511047247 chr1 90998462 90999478 + 0.499560511047247 NA intron (NM_001111312, intron 1 of 12) CpG 243 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_104_99_-0.21871957457471_6.53449640248737_0.499560511047247-4 chr7 118242654 118243602 + 0.499560511047247 NA promoter-TSS (NR_027879) promoter-TSS (NR_027879) 509 NM_001031814 233789 Mm.309053 NM_177180 ENSMUSG00000030655 Smg1 2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) protein-coding common_peak2_120_86_0.185367265127597_6.53562712841253_0.499560511047247 chr17 88626291 88627467 + 0.499560511047247 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 324 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_120_86_0.185367265127597_6.53562712841253_0.499560511047247-2 chr7 111121653 111123271 + 0.499560511047247 NA non-coding (NR_015573, exon 1 of 3) non-coding (NR_015573, exon 1 of 3) 213 NR_015573 75479 Mm.381620 NR_015573 ENSMUSG00000110424 1700012D14Rik - RIKEN cDNA 1700012D14 gene ncRNA common_peak2_104_99_-0.21871957457471_6.53449640248737_0.499560511047247-3 chr4 132508790 132510422 + 0.499560511047247 NA intron (NM_144907, intron 1 of 9) intron (NM_144907, intron 1 of 9) 850 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak2_120_86_0.185367265127597_6.53562712841253_0.499560511047247-2 chr7 109751691 109752851 + 0.499560511047247 NA promoter-TSS (NM_020050) promoter-TSS (NM_020050) -8 NM_020050 56786 Mm.240668 NM_020050 ENSMUSG00000031021 Tmem9b 2310004K06Rik|AW539847|D7H11orf15|ICRFP703B1614Q5.3 TMEM9 domain family, member B protein-coding common_peak2_104_99_-0.21871957457471_6.53449640248737_0.499560511047247-2 chr3 89998051 89999217 + 0.499560511047247 NA promoter-TSS (NM_001310681) promoter-TSS (NM_001310681) 82 NM_011826 23897 Mm.256035 NM_011826 ENSMUSG00000027944 Hax1 HAX-1|HSP1BP-1|Hs1bp1|SIG-111|Silg111|mHAX-1s HCLS1 associated X-1 protein-coding common_peak2_104_99_-0.21871957457471_6.53449640248737_0.499560511047247 chr11 31870095 31871515 + 0.499560511047247 NA promoter-TSS (NM_001290676) promoter-TSS (NM_001290676) -135 NM_001290676 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_103_73_0.201974849679674_6.31044079046879_0.499127046282402 chr19 5688104 5688691 + 0.499127046282402 NA promoter-TSS (NM_022012) promoter-TSS (NM_022012) 511 NM_144868 104401 Mm.329650 NM_144868 ENSMUSG00000054874 Pcnx3 Pcnxl3|mKIAA4073 pecanex homolog 3 protein-coding common_peak2_88_85_-0.237957528302171_6.30728599055101_0.499127046282402 chr12 102756938 102758578 + 0.499127046282402 NA promoter-TSS (NM_025666) promoter-TSS (NM_025666) 52 NM_001142939 100859931 Mm.291222 NM_001142939 ENSMUSG00000041716 Gm20604 AK010878-Moap1 predicted gene 20604 protein-coding common_peak2_59_40_0.265925561007801_5.49051478512198_0.498996592876743-4 chr6 87914131 87914828 + 0.498996592876743 NA TTS (NM_017477) TTS (NM_017477) 503 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743-5 chr2 80315288 80316032 + 0.498996592876743 NA 5' UTR (NM_024181, exon 1 of 23) 5' UTR (NM_024181, exon 1 of 23) 194 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743-2 chr15 103272896 103273505 + 0.498996592876743 NA intron (NM_019817, intron 1 of 8) intron (NM_019817, intron 1 of 8) 312 NM_001357748 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743-3 chr17 63864007 63864720 + 0.498996592876743 NA intron (NM_001037997, intron 1 of 18) CpG 382 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743-7 chr8 94299187 94299931 + 0.498996592876743 NA intron (NM_001357268, intron 6 of 20) intron (NM_001357268, intron 6 of 20) -24752 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak2_48_49_-0.31049804640867_5.48860716657039_0.498996592876743-4 chr5 148360400 148361282 + 0.498996592876743 NA intron (NM_007513, intron 2 of 12) intron (NM_007513, intron 2 of 12) 31974 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_59_40_0.265925561007801_5.49051478512198_0.498996592876743-2 chr16 37653629 37654337 + 0.498996592876743 NA intron (NM_026610, intron 1 of 2) intron (NM_026610, intron 1 of 2) 385 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding common_peak2_48_49_-0.31049804640867_5.48860716657039_0.498996592876743 chr1 194619907 194620755 + 0.498996592876743 NA 5' UTR (NM_008882, exon 1 of 32) 5' UTR (NM_008882, exon 1 of 32) 502 NM_008882 18845 Mm.2251 NM_008882 ENSMUSG00000026640 Plxna2 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 plexin A2 protein-coding common_peak1_48_49_-0.31049804640867_5.48860716657039_0.498996592876743-3 chr5 64196671 64197037 + 0.498996592876743 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -33503 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_48_49_-0.31049804640867_5.48860716657039_0.498996592876743-2 chr4 59454318 59454926 + 0.498996592876743 NA Intergenic Intergenic -15989 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743 chr13 69533309 69534112 + 0.498996592876743 NA 5' UTR (NM_001169131, exon 1 of 13) 5' UTR (NM_001169131, exon 1 of 13) 154 NM_198600 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak2_48_49_-0.31049804640867_5.48860716657039_0.498996592876743-2 chr15 11906656 11907370 + 0.498996592876743 NA intron (NR_131059, intron 1 of 1) intron (NR_131059, intron 1 of 1) 358 NM_001286395 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_48_49_-0.31049804640867_5.48860716657039_0.498996592876743-3 chr16 32671225 32672092 + 0.498996592876743 NA intron (NM_001110147, intron 9 of 13) intron (NM_001110147, intron 9 of 13) -1496 NM_001347185 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743-6 chr6 108212076 108212922 + 0.498996592876743 NA promoter-TSS (NM_010585) promoter-TSS (NM_010585) -597 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak2_47_49_-0.340035522902719_5.47383842832336_0.498996592876743-2 chr7 66079696 66080260 + 0.498996592876743 NA intron (NM_001348246, intron 1 of 5) CpG 329 NM_024439 109815 Mm.482127 NM_024439 ENSMUSG00000075701 Selenos 1500011E07Rik|C78786|H-4|H-47|H4|H47|Sels|Vimp selenoprotein S protein-coding common_peak2_59_40_0.265925561007801_5.49051478512198_0.498996592876743-3 chr19 21271492 21272042 + 0.498996592876743 NA promoter-TSS (NM_009551) promoter-TSS (NM_009551) -511 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak2_47_49_-0.340035522902719_5.47383842832336_0.498996592876743 chr10 91170791 91171450 + 0.498996592876743 NA promoter-TSS (NM_001283048) promoter-TSS (NM_001283048) 499 NM_001080132 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_48_49_-0.31049804640867_5.48860716657039_0.498996592876743 chr15 74920978 74921618 + 0.498996592876743 NA Intergenic RSINE1|SINE|B4 -33753 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_47_49_-0.340035522902719_5.47383842832336_0.498996592876743 chr16 13903213 13903907 + 0.498996592876743 NA promoter-TSS (NM_053181) promoter-TSS (NM_053181) 399 NM_001289562 93734 Mm.76554 NM_033564 ENSMUSG00000022679 Mpv17l M-LP Mpv17 transgene, kidney disease mutant-like protein-coding common_peak1_59_40_0.265925561007801_5.49051478512198_0.498996592876743-4 chr19 8819544 8819874 + 0.498996592876743 NA promoter-TSS (NM_027412) promoter-TSS (NM_027412) 308 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak2_59_40_0.265925561007801_5.49051478512198_0.498996592876743 chr10 95232930 95233374 + 0.498996592876743 NA intron (NM_001330138, intron 2 of 2) intron (NM_001330138, intron 2 of 2) -87327 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak2_141_131_-0.186828357224965_6.95097994074597_0.498957950757526 chr8 8689508 8690568 + 0.498957950757526 NA TTS (NR_106114) TTS (NR_106114) 124 NR_106114 102465762 NR_106114 ENSMUSG00000098917 Mir7654 Gm27748|mmu-mir-7654 microRNA 7654 ncRNA common_peak2_159_116_0.158167284668537_6.94944836191767_0.498957950757526 chr8 122547282 122548996 + 0.498957950757526 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 3190 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak1_141_131_-0.186828357224965_6.95097994074597_0.498957950757526 chr17 26582474 26584542 + 0.498957950757526 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 21996 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_160_116_0.167092652213735_6.95391104569027_0.498957950757526 chr6 67035745 67037326 + 0.498957950757526 NA promoter-TSS (NR_040278) promoter-TSS (NR_040278) -64 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_141_131_-0.186828357224965_6.95097994074597_0.498957950757526-2 chr8 85036902 85038460 + 0.498957950757526 NA intron (NM_001122843, intron 1 of 24) CpG 513 NM_001122843 212999 Mm.220357 NM_145390 ENSMUSG00000031691 Tnpo2 1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2 transportin 2 (importin 3, karyopherin beta 2b) protein-coding common_peak2_87_61_0.217924112636941_6.06315836670534_0.498810849059183-3 chr9 65345948 65346834 + 0.498810849059183 NA exon (NM_016688, exon 1 of 5) exon (NM_016688, exon 1 of 5) 323 NM_016688 50996 Mm.29193 NM_016688 ENSMUSG00000041837 Pdcd7 C80112|ES18 programmed cell death 7 protein-coding common_peak1_87_61_0.217924112636941_6.06315836670534_0.498810849059183 chr4 41274498 41275357 + 0.498810849059183 NA intron (NM_026872, intron 1 of 28) intron (NM_026872, intron 1 of 28) 208 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak1_87_61_0.217924112636941_6.06315836670534_0.498810849059183-3 chr6 66896527 66897786 + 0.498810849059183 NA intron (NM_001177558, intron 1 of 4) intron (NM_001177558, intron 1 of 4) 265 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak2_87_61_0.217924112636941_6.06315836670534_0.498810849059183-2 chr15 66861874 66862703 + 0.498810849059183 NA Intergenic Intergenic -29105 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_87_61_0.217924112636941_6.06315836670534_0.498810849059183-2 chr4 43965708 43966521 + 0.498810849059183 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 8412 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak2_87_61_0.217924112636941_6.06315836670534_0.498810849059183 chr12 31270381 31271139 + 0.498810849059183 NA intron (NM_008482, intron 3 of 32) intron (NM_008482, intron 3 of 32) 5466 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak2_73_72_-0.26591879739582_6.05686516018211_0.498810849059171 chr12 59061014 59061445 + 0.498810849059171 NA exon (NM_030057, exon 1 of 6) exon (NM_030057, exon 1 of 6) 243 NM_001306218 78232 Mm.290070 NM_030057 ENSMUSG00000020993 Trappc6b 5830498C14Rik|C79212 trafficking protein particle complex 6B protein-coding common_peak2_73_72_-0.26591879739582_6.05686516018211_0.498810849059171-2 chr19 36120313 36121255 + 0.498810849059171 NA promoter-TSS (NM_013468) promoter-TSS (NM_013468) -940 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_73_72_-0.26591879739582_6.05686516018211_0.498810849059171-2 chr8 47533719 47534251 + 0.498810849059171 NA promoter-TSS (NM_177240) promoter-TSS (NM_177240) 340 NM_203507 192174 Mm.273081 NM_203507 ENSMUSG00000031568 Rwdd4a BC016198|Gm1942|Rwdd4 RWD domain containing 4A protein-coding common_peak1_73_72_-0.26591879739582_6.05686516018211_0.498810849059171 chr10 39732234 39733139 + 0.498810849059171 NA promoter-TSS (NR_038037) promoter-TSS (NR_038037) 526 NM_011264 19714 Mm.439723 NM_011264 ENSMUSG00000019841 Rev3l Rev|Rev3|Sez4 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding common_peak2_60_60_-0.283581268260011_5.78894670343288_0.498709391116689-3 chr8 108764826 108765436 + 0.498709391116689 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 50487 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_60_60_-0.283581268260011_5.78894670343288_0.498709391116689-3 chr9 55511478 55512137 + 0.498709391116689 NA intron (NM_145615, intron 1 of 11) CpG 436 NM_145615 110842 Mm.290853 NM_145615 ENSMUSG00000032314 Etfa 2010200I21Rik|D9Ertd394e electron transferring flavoprotein, alpha polypeptide protein-coding common_peak1_60_60_-0.283581268260011_5.78894670343288_0.498709391116689 chr2 32167006 32167854 + 0.498709391116689 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 16282 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_60_60_-0.283581268260011_5.78894670343288_0.498709391116689-2 chr7 16924278 16924632 + 0.498709391116689 NA promoter-TSS (NM_007590) promoter-TSS (NM_007590) -423 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|Cam3|Camc|R75142 calmodulin 3 protein-coding common_peak2_60_60_-0.283581268260011_5.78894670343288_0.498709391116689 chr11 8675083 8675953 + 0.498709391116689 NA Intergenic PB1D10|SINE|Alu -10983 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_60_60_-0.283581268260011_5.78894670343288_0.498709391116689-2 chr7 144025235 144025939 + 0.498709391116689 NA Intergenic B3|SINE|B2 16333 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_140_101_0.17501658398477_6.75993363396388_0.49820920319504 chr15 76710657 76711413 + 0.49820920319504 NA promoter-TSS (NM_058214) promoter-TSS (NM_058214) 394 NM_001358893 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding common_peak2_122_115_-0.206185825299679_6.75488808247773_0.498209203195015 chr10 41518777 41520056 + 0.498209203195015 NA promoter-TSS (NM_016898) promoter-TSS (NM_016898) -84 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak2_123_115_-0.194586435148034_6.76068777755355_0.498209203195015 chr8 123212128 123212713 + 0.498209203195015 NA promoter-TSS (NM_177279) promoter-TSS (NM_177279) 368 NM_145606 234852 Mm.41596 NM_145606 ENSMUSG00000000743 Chmp1a 2900018H07Rik|Pcoln3 charged multivesicular body protein 1A protein-coding common_peak1_205_151_0.142604872041398_7.31922994946428_0.497849088446738 chr3 107630977 107632356 + 0.497849088446738 NA promoter-TSS (NM_153563) promoter-TSS (NM_153563) 44 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding common_peak1_233_209_-0.141146097902587_7.64367246871483_0.497570864827679 chr11 31367613 31370296 + 0.497570864827679 NA intron (NM_011491, intron 1 of 3) CpG 1107 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_105_100_-0.219496407055178_6.54846327922421_0.49743374032296 chr11 117779514 117780599 + 0.49743374032296 NA promoter-TSS (NR_154387) promoter-TSS (NR_154387) -408 NR_154387 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding common_peak2_105_100_-0.219496407055178_6.54846327922421_0.49743374032296-2 chr15 97787171 97787865 + 0.49743374032296 NA intron (NM_026353, intron 1 of 2) intron (NM_026353, intron 1 of 2) 3153 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding unique_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-4 chr16 30518130 30518494 + 0.497202060940027 NA exon (NM_001357413, exon 11 of 12) exon (NM_001357413, exon 11 of 12) 32266 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-9 chr17 73068140 73068533 + 0.497202060940027 NA Intergenic Intergenic -39649 NM_001177968 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-4 chr15 6737063 6737388 + 0.497202060940027 NA intron (NM_030168, intron 3 of 37) intron (NM_030168, intron 3 of 37) 28844 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027 chr1 21078843 21079125 + 0.497202060940027 NA intron (NM_177409, intron 1 of 10) CpG 241 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-12 chr8 12662970 12663190 + 0.497202060940027 NA intron (NM_198031, intron 2 of 21) intron (NM_198031, intron 2 of 21) 9020 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-6 chr2 26380168 26380707 + 0.497202060940027 NA intron (NM_001290419, intron 1 of 23) CpG 216 NM_172339 227644 Mm.207460 NM_172339 ENSMUSG00000036281 Snapc4 5730436L13Rik small nuclear RNA activating complex, polypeptide 4 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-13 chr8 67280639 67281210 + 0.497202060940027 NA Intergenic Intergenic -209834 NM_008673 17960 Mm.14125 NM_008673 ENSMUSG00000025588 Nat1 Nat-1 N-acetyl transferase 1 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-15 chr6 91369477 91369813 + 0.497202060940027 NA intron (NM_009527, intron 3 of 3) intron (NM_009527, intron 3 of 3) 41724 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-9 chr7 49778380 49778854 + 0.497202060940027 NA exon (NM_133740, exon 2 of 16) exon (NM_133740, exon 2 of 16) 259 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-2 chr12 78728478 78728835 + 0.497202060940027 NA intron (NM_029069, intron 7 of 8) intron (NM_029069, intron 7 of 8) -20291 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak1_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-2 chr8 94785116 94785315 + 0.497202060940027 NA Intergenic Intergenic 13035 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-5 chr10 77147547 77147811 + 0.497202060940027 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 18851 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-6 chr2 172345566 172345964 + 0.497202060940027 NA exon (NM_025912, exon 1 of 3) exon (NM_025912, exon 1 of 3) 188 NM_025912 67017 Mm.30013 NM_025912 ENSMUSG00000027495 Fam210b 2010011I20Rik|AI430961|AV108736 family with sequence similarity 210, member B protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027 chr1 43092612 43092831 + 0.497202060940027 NA promoter-TSS (NM_001357299) promoter-TSS (NM_001357299) -235 NM_001357299 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-3 chr14 55591238 55591482 + 0.497202060940027 NA promoter-TSS (NM_011190) promoter-TSS (NM_011190) -259 NM_001029855 19188 Mm.371573 NM_011190 ENSMUSG00000079197 Psme2 AA589371|AI788882|PA28b proteasome (prosome, macropain) activator subunit 2 (PA28 beta) protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-16 chr6 128399310 128399562 + 0.497202060940027 NA promoter-TSS (NM_021717) promoter-TSS (NM_021717) -330 NM_021717 60345 Mm.269883 NM_021717 ENSMUSG00000001520 Nrip2 AW491344|NIX1 nuclear receptor interacting protein 2 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-3 chr11 60256142 60256630 + 0.497202060940027 NA intron (NM_001359810, intron 7 of 12) intron (NM_001359810, intron 7 of 12) -33805 NM_001358315 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027 chr1 69458761 69459333 + 0.497202060940027 NA Intergenic Intergenic 226913 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-7 chr3 37204324 37204584 + 0.497202060940027 NA Intergenic Intergenic 21569 NR_153188 102639848 Mm.424479 NR_153188 Gm12532 - predicted gene 12532 ncRNA unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027 chr11 63114850 63115482 + 0.497202060940027 NA Intergenic Intergenic -13816 NM_001302258 18858 Mm.1237 NM_008885 ENSMUSG00000018217 Pmp22 22kDa|Gas-3|HNPP|TRE002|Tr|trembler peripheral myelin protein 22 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-3 chr13 45950105 45950384 + 0.497202060940027 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 14747 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-2 chr11 98773192 98773661 + 0.497202060940027 NA intron (NM_145434, intron 1 of 7) MIR3|SINE|MIR 1951 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-2 chr11 83913443 83913851 + 0.497202060940027 NA Intergenic Intergenic -28443 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-12 chr6 146963549 146963891 + 0.497202060940027 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -9299 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-2 chr10 31313516 31313992 + 0.497202060940027 NA intron (NM_027168, intron 1 of 5) CpG 349 NM_027168 69692 Mm.245537 NM_027168 ENSMUSG00000000295 Hddc2 2310057G13Rik HD domain containing 2 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-2 chr11 53802306 53802651 + 0.497202060940027 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 32005 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-13 chr3 129878632 129878852 + 0.497202060940027 NA exon (NM_023196, exon 1 of 4) exon (NM_023196, exon 1 of 4) 136 NM_023196 66350 Mm.151951 NM_023196 ENSMUSG00000027999 Pla2g12a 2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1 phospholipase A2, group XIIA protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-8 chr6 146963492 146963767 + 0.497202060940027 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -9208 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-6 chr13 56522649 56523008 + 0.497202060940027 NA intron (NM_178674, intron 1 of 6) intron (NM_178674, intron 1 of 6) 356 NM_001359807 213311 Mm.233904 NM_178674 ENSMUSG00000035509 Fbxl21 D630045D17Rik|FBL3B|FBXL3B|Psttm F-box and leucine-rich repeat protein 21 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-4 chr11 116413099 116413381 + 0.497202060940027 NA promoter-TSS (NM_027258) promoter-TSS (NM_027258) -208 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-4 chr19 32255021 32255428 + 0.497202060940027 NA intron (NM_144792, intron 3 of 9) intron (NM_144792, intron 3 of 9) -44211 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027 chr1 64533023 64533250 + 0.497202060940027 NA intron (NM_001037726, intron 1 of 6) CpG 332 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-7 chr2 164609425 164609775 + 0.497202060940027 NA intron (NM_001080550, intron 1 of 7) intron (NM_001080550, intron 1 of 7) 3786 NM_001276432 277343 Mm.383292 NM_001080550 ENSMUSG00000070533 Wfdc8 Gm706 WAP four-disulfide core domain 8 protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-7 chr5 72802460 72802881 + 0.497202060940027 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -49893 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-10 chr7 64192883 64193433 + 0.497202060940027 NA intron (NM_018752, intron 1 of 13) intron (NM_018752, intron 1 of 13) 7699 NM_018752 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-9 chr9 79215681 79216010 + 0.497202060940027 NA Intergenic Intergenic 303457 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-10 chr9 71693853 71694249 + 0.497202060940027 NA intron (NM_001304362, intron 8 of 18) intron (NM_001304362, intron 8 of 18) 77551 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-8 chr16 45378554 45378947 + 0.497202060940027 NA Intergenic Intergenic 30303 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-6 chr4 107374198 107374633 + 0.497202060940027 NA intron (NM_028355, intron 4 of 17) intron (NM_028355, intron 4 of 17) 6631 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-13 chr8 128272001 128272321 + 0.497202060940027 NA Intergenic Intergenic 6064 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-18 chr8 36457791 36458006 + 0.497202060940027 NA Intergenic CpG -31293 NM_176952 319582 Mm.180924 NM_176952 ENSMUSG00000039620 6430573F11Rik Kiaa1456|TRM9L|Trmt9b RIKEN cDNA 6430573F11 gene protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-5 chr17 45944756 45944957 + 0.497202060940027 NA Intergenic Intergenic -63404 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA unique_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027 chr10 111996721 111997140 + 0.497202060940027 NA exon (NM_028608, exon 1 of 6) exon (NM_028608, exon 1 of 6) 334 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding unique_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-5 chr16 33873609 33874060 + 0.497202060940027 NA intron (NM_001145884, intron 3 of 14) intron (NM_001145884, intron 3 of 14) 44169 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-3 chr10 63338262 63338661 + 0.497202060940027 NA intron (NM_019812, intron 1 of 8) CpG 574 NM_019812 93759 Mm.351459 NM_019812 ENSMUSG00000020063 Sirt1 AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha sirtuin 1 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-6 chr11 77771929 77772274 + 0.497202060940027 NA Intergenic Intergenic -5134 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-11 chr2 126677750 126678091 + 0.497202060940027 NA Intergenic B1_Mus1|SINE|Alu -1583 NM_001271470 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027 chr12 30911284 30911478 + 0.497202060940027 NA promoter-TSS (NM_013709) promoter-TSS (NM_013709) 231 NM_021330 11431 Mm.359831 NM_021330 ENSMUSG00000044573 Acp1 4632432E04Rik|AI427468|Acp-1|LMW-PTP|Lmptp acid phosphatase 1, soluble protein-coding common_peak1_19_23_-0.535265557749482_4.31732972184641_0.497202060940027 chr2 118114455 118114939 + 0.497202060940027 NA exon (NM_011580, exon 5 of 22) exon (NM_011580, exon 5 of 22) 2821 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-10 chr7 109153678 109154289 + 0.497202060940027 NA intron (NM_001302205, intron 1 of 3) B4A|SINE|B4 16529 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-5 chr2 112454400 112454766 + 0.497202060940027 NA promoter-TSS (NM_133749) promoter-TSS (NM_133749) -442 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-7 chr11 115382122 115382585 + 0.497202060940027 NA exon (NM_001080929, exon 1 of 5) exon (NM_001080929, exon 1 of 5) 437 NM_001080929 237988 Mm.102872 NM_001080929 ENSMUSG00000050910 Cdr2l D030068L24Rik|Gm21 cerebellar degeneration-related protein 2-like protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-10 chr18 66223336 66223583 + 0.497202060940027 NA intron (NM_178793, intron 2 of 10) G-rich|Low_complexity|Low_complexity -4126 NR_030467 751558 NR_030467 ENSMUSG00000076147 Mir694 Mirn694|mir-694|mmu-mir-694 microRNA 694 ncRNA common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-9 chr8 3587817 3588184 + 0.497202060940027 NA intron (NM_001347111, intron 1 of 18) CpG 550 NM_001347111 69697 Mm.390010 NM_027171 ENSMUSG00000044433 Camsap3 2310057J16Rik|Kiaa1543|Nezha calmodulin regulated spectrin-associated protein family, member 3 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-5 chr11 119056433 119056835 + 0.497202060940027 NA Intergenic CpG -15721 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027 chr1 132321473 132321941 + 0.497202060940027 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 5582 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-5 chr3 29977140 29977545 + 0.497202060940027 NA exon (NM_007963, exon 8 of 15) exon (NM_007963, exon 8 of 15) 35862 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-9 chr6 117916393 117916826 + 0.497202060940027 NA promoter-TSS (NM_001166427) promoter-TSS (NM_001166427) -685 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-10 chr17 35121725 35122027 + 0.497202060940027 NA promoter-TSS (NM_001303476) promoter-TSS (NM_001303476) 177 NM_001303446 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-5 chr17 34898178 34898461 + 0.497202060940027 NA promoter-TSS (NM_001286573) promoter-TSS (NM_001286573) -173 NM_001286575 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-2 chr1 87849241 87849612 + 0.497202060940027 NA Intergenic Intergenic -3861 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-2 chr11 48994195 48994479 + 0.497202060940027 NA Intergenic Intergenic -2091 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-4 chr16 17451364 17451756 + 0.497202060940027 NA promoter-TSS (NM_001277231) promoter-TSS (NM_001277231) -425 NM_001277231 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-3 chr13 55622528 55622775 + 0.497202060940027 NA promoter-TSS (NM_007596) promoter-TSS (NM_007596) -354 NM_007596 12328 Mm.2313 NM_007596 ENSMUSG00000021501 Caml AI385748|Camlg calcium modulating ligand protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-4 chr15 74752563 74752999 + 0.497202060940027 NA intron (NM_011838, intron 1 of 3) intron (NM_011838, intron 1 of 3) 198 NM_011838 23936 Mm.257067 NM_011838 ENSMUSG00000022594 Lynx1 AI838844|SLURP-2 Ly6/neurotoxin 1 protein-coding unique_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-3 chr15 73150015 73150448 + 0.497202060940027 NA intron (NM_153178, intron 1 of 18) A-rich|Low_complexity|Low_complexity 34716 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-8 chr17 44685176 44685650 + 0.497202060940027 NA intron (NM_001271627, intron 4 of 7) intron (NM_001271627, intron 4 of 7) 50763 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-7 chr5 140015849 140016286 + 0.497202060940027 NA intron (NR_152617, intron 16 of 16) intron (NR_152617, intron 16 of 16) 108124 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-6 chr5 139731027 139731378 + 0.497202060940027 NA intron (NM_174850, intron 1 of 16) intron (NM_174850, intron 1 of 16) 5131 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-11 chr7 130968301 130968610 + 0.497202060940027 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 32252 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-9 chr6 42265161 42265477 + 0.497202060940027 NA TTS (NM_175408) TTS (NM_175408) 334 NM_007610 12366 Mm.3921 NM_007610 ENSMUSG00000029863 Casp2 CASP-2|ICH-1|NEDD-2|Nedd2 caspase 2 protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-8 chr5 140063822 140064318 + 0.497202060940027 NA intron (NR_152617, intron 16 of 16) B1_Mur1|SINE|Alu 110848 NM_001359027 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-8 chr4 47151447 47151768 + 0.497202060940027 NA Intergenic Intergenic -56405 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-7 chr13 102014804 102015286 + 0.497202060940027 NA Intergenic Intergenic -246828 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-9 chr16 46009950 46010285 + 0.497202060940027 NA 5' UTR (NM_001134480, exon 1 of 4) 5' UTR (NM_001134480, exon 1 of 4) 296 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-3 chr1 170006907 170007310 + 0.497202060940027 NA intron (NM_022563, intron 2 of 16) intron (NM_022563, intron 2 of 16) 37699 NR_040438 67303 Mm.396611 NR_040438 ENSMUSG00000097503 3110045C21Rik AI838577 RIKEN cDNA 3110045C21 gene ncRNA unique_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-2 chr1 131827377 131827784 + 0.497202060940027 NA promoter-TSS (NM_173865) promoter-TSS (NM_173865) -432 NM_173865 98396 Mm.389181 NM_173865 ENSMUSG00000013275 Slc41a1 AI573938|B230315F01Rik solute carrier family 41, member 1 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-6 chr2 35259826 35260511 + 0.497202060940027 NA intron (NM_001206368, intron 1 of 16) B1_Mur4|SINE|Alu 3809 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-4 chr10 77134510 77134983 + 0.497202060940027 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -21041 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-10 chr7 109546445 109546729 + 0.497202060940027 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 26455 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-12 chr3 54432301 54432648 + 0.497202060940027 NA Intergenic Intergenic 71367 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-8 chr5 92842958 92843270 + 0.497202060940027 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 33732 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-17 chr7 19004508 19004937 + 0.497202060940027 NA exon (NM_178757, exon 1 of 1) exon (NM_178757, exon 1 of 1) 657 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak2_27_17_0.361774092349613_4.35081204761712_0.497202060940027-8 chr7 28919639 28919854 + 0.497202060940027 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 38090 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-5 chr18 69415911 69416430 + 0.497202060940027 NA intron (NM_001361128, intron 3 of 19) intron (NM_001361128, intron 3 of 19) 70010 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-11 chr3 121660208 121660633 + 0.497202060940027 NA Intergenic Intergenic -10343 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-11 chr8 95352357 95352773 + 0.497202060940027 NA 5' UTR (NM_008609, exon 1 of 10) 5' UTR (NM_008609, exon 1 of 10) 269 NM_008609 17388 Mm.217116 NM_008609 ENSMUSG00000031790 Mmp15 AI503551|MT-MMP 2|MT2-MMP matrix metallopeptidase 15 protein-coding common_peak2_19_23_-0.535265557749482_4.31732972184641_0.497202060940027-14 chr4 32174489 32174801 + 0.497202060940027 NA Intergenic Intergenic 210538 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak1_27_17_0.361774092349613_4.35081204761712_0.497202060940027-7 chr5 92839431 92839926 + 0.497202060940027 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 30296 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-3 chr10 24444684 24445119 + 0.497202060940027 NA Intergenic Intergenic -150541 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_20_23_-0.465372825128532_4.35227608815689_0.497202060940027-4 chr16 18471727 18472096 + 0.497202060940027 NA intron (NM_001353143, intron 12 of 16) intron (NM_001353143, intron 12 of 16) -26802 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding common_peak1_183_134_0.151927745598935_7.1527794698503_0.496872030112221-2 chr2 151915100 151916280 + 0.496872030112221 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 4483 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_183_134_0.151927745598935_7.1527794698503_0.496872030112221 chr15 53689440 53690471 + 0.496872030112221 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -75676 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_284_212_0.120836376154155_7.79512780830292_0.496724351164445 chr8 108895946 108898299 + 0.496724351164445 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -39738 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak1_89_86_-0.238630327995389_6.32362833185103_0.496646143992127 chr18 36348750 36349610 + 0.496646143992127 NA intron (NM_001081365, intron 1 of 2) CpG 556 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding common_peak2_104_74_0.196317924704134_6.32697765284795_0.496646143992127 chrX 13071579 13072498 + 0.496646143992127 NA intron (NM_009481, intron 1 of 44) CpG 540 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak1_104_74_0.196317924704134_6.32697765284795_0.496646143992127 chr1 34109884 34111157 + 0.496646143992127 NA intron (NM_001276764, intron 5 of 102) intron (NM_001276764, intron 5 of 102) -6839 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak1_207_152_0.146985393042729_7.33088053921402_0.496621649154246 chr15 76227921 76229920 + 0.496621649154246 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 577 NM_201385 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_206_152_0.140081683985267_7.32742868468529_0.496621649154246 chr3 5574801 5576889 + 0.496621649154246 NA intron (NM_008994, intron 1 of 5) CpG 403 NM_001163301 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding common_peak1_234_210_-0.141890945797742_7.65015371580832_0.496589874666241 chr2 117903092 117905516 + 0.496589874666241 NA intron (NR_040631, intron 5 of 5) intron (NR_040631, intron 5 of 5) 82376 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_141_102_0.171065234950269_6.77203314465835_0.496397714646132 chr1 93477110 93478801 + 0.496397714646132 NA intron (NM_133808, intron 1 of 27) intron (NM_133808, intron 1 of 27) 422 NM_001357556 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_141_102_0.171065234950269_6.77203314465835_0.496397714646132-2 chr5 138992586 138993942 + 0.496397714646132 NA intron (NM_008808, intron 2 of 5) CpG 1689 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_141_102_0.171065234950269_6.77203314465835_0.496397714646132 chr17 12991845 12993196 + 0.496397714646132 NA promoter-TSS (NM_175394) promoter-TSS (NM_175394) 19 NM_175394 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding common_peak2_74_73_-0.266318901249187_6.07629391500436_0.495874201160631 chr12 98736923 98737579 + 0.495874201160631 NA intron (NM_001146199, intron 1 of 18) intron (NM_001146199, intron 1 of 18) 154 NM_001146199 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding common_peak1_74_73_-0.266318901249187_6.07629391500436_0.495874201160631-2 chr5 9161029 9161584 + 0.495874201160631 NA intron (NR_152859, intron 1 of 16) CpG 470 NR_152860 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding common_peak1_74_73_-0.266318901249187_6.07629391500436_0.495874201160631 chr19 10555806 10556666 + 0.495874201160631 NA promoter-TSS (NM_026798) promoter-TSS (NM_026798) 2 NM_026798 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding common_peak2_75_73_-0.247344890657048_6.08578092030043_0.495874201160631 chr10 62313662 62314731 + 0.495874201160631 NA intron (NM_010438, intron 5 of 21) intron (NM_010438, intron 5 of 21) 26225 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_74_73_-0.266318901249187_6.07629391500436_0.495874201160631-3 chr7 81763025 81763744 + 0.495874201160631 NA intron (NM_025997, intron 1 of 2) CpG 431 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding common_peak1_88_62_0.21102730290001_6.08279357494992_0.495874201160619 chr6 145862167 145863482 + 0.495874201160619 NA 3' UTR (NM_024469, exon 5 of 5) 3' UTR (NM_024469, exon 5 of 5) 2596 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_88_62_0.21102730290001_6.08279357494992_0.495874201160619-2 chr9 36768070 36768836 + 0.495874201160619 NA promoter-TSS (NM_008408) promoter-TSS (NM_008408) -875 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak2_88_62_0.21102730290001_6.08279357494992_0.495874201160619 chr19 57198789 57199368 + 0.495874201160619 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) -1447 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_162_118_0.160325226416481_6.97498037651618_0.495799926327935 chr18 36280257 36282116 + 0.495799926327935 NA promoter-TSS (NM_008989) promoter-TSS (NM_008989) 24 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak2_162_118_0.160325226416481_6.97498037651618_0.495799926327935 chr7 80992544 80994321 + 0.495799926327935 NA promoter-TSS (NM_178707) promoter-TSS (NM_178707) -252 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 A730014M16Rik|Znf592 zinc finger protein 592 protein-coding common_peak2_144_133_-0.17857424989987_6.97680206550784_0.495799926327935 chr2 167630316 167632024 + 0.495799926327935 NA intron (NM_001311131, intron 1 of 4) intron (NM_001311131, intron 1 of 4) 835 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_162_118_0.160325226416481_6.97498037651618_0.495799926327935-2 chr8 61223819 61225039 + 0.495799926327935 NA intron (NM_021506, intron 1 of 11) CpG 258 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak1_187_170_-0.158301170730332_7.33870192952073_0.495409431582823 chr2 167421048 167422630 + 0.495409431582823 NA intron (NM_001304542, intron 1 of 15) CpG 129 NM_001304542 77031 Mm.278924 NM_148929 ENSMUSG00000039463 Slc9a8 1200006P13Rik|6430709P13Rik|AI182282|NHE-8|NHE8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 protein-coding common_peak2_106_101_-0.220259304942337_6.56229568950033_0.495352088675007 chr10 13192177 13193241 + 0.495352088675007 NA intron (NM_181470, intron 1 of 10) intron (NM_181470, intron 1 of 10) 428 NM_181470 353258 Mm.117581 NM_181470 ENSMUSG00000019814 Ltv1 2610020N02Rik LTV1 ribosome biogenesis factor protein-coding common_peak2_106_101_-0.220259304942337_6.56229568950033_0.495352088675007-2 chr12 108793425 108794663 + 0.495352088675007 NA exon (NM_009537, exon 1 of 5) exon (NM_009537, exon 1 of 5) 733 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_106_101_-0.220259304942337_6.56229568950033_0.495352088675007 chr17 20945432 20946339 + 0.495352088675007 NA intron (NM_016891, intron 1 of 14) CpG 431 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding common_peak1_122_88_0.176061738861495_6.56376430039715_0.495352088674982-2 chr11 31504076 31504834 + 0.495352088674982 NA Intergenic Intergenic -134394 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_123_88_0.18766112901314_6.56956399547297_0.495352088674982 chr13 104816714 104817698 + 0.495352088674982 NA promoter-TSS (NM_026072) promoter-TSS (NM_026072) 36 NR_135272 67288 Mm.125465 NM_026075 ENSMUSG00000021716 Srek1ip1 3110031B13Rik|AI462702|AV348305|AW121048|Sfrs12ip1|Srsf12ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 protein-coding common_peak1_122_88_0.176061738861495_6.56376430039715_0.495352088674982 chr1 87756033 87756932 + 0.495352088674982 NA intron (NM_029846, intron 1 of 17) CpG 471 NM_001205392 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding common_peak1_122_88_0.176061738861495_6.56376430039715_0.495352088674982-3 chr2 152226579 152227613 + 0.495352088674982 NA intron (NM_007788, intron 1 of 12) CpG 256 NM_007788 12995 Mm.23692 NM_007788 ENSMUSG00000074698 Csnk2a1 CK2|Csnk2a1-rs4 casein kinase 2, alpha 1 polypeptide protein-coding common_peak1_123_88_0.18766112901314_6.56956399547297_0.495352088674982-2 chr18 75495114 75496555 + 0.495352088674982 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -18811 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_61_61_-0.283746770834093_5.81232292496983_0.495169887621129 chr8 124291129 124291670 + 0.495169887621129 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 60005 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_61_61_-0.283746770834093_5.81232292496983_0.495169887621129 chr2 130283580 130284663 + 0.495169887621129 NA intron (NM_130884, intron 2 of 11) CpG 330 NM_130884 170718 Mm.29590 NM_130884 ENSMUSG00000027406 Idh3b C78231 isocitrate dehydrogenase 3 (NAD+) beta protein-coding common_peak2_61_61_-0.283746770834093_5.81232292496983_0.495169887621129-3 chr7 5051344 5052181 + 0.495169887621129 NA intron (NM_026900, intron 1 of 1) CpG 230 NM_026900 68992 Mm.41484 NM_026900 ENSMUSG00000055633 Zfp580 1500015O20Rik|AI838225|Znf580 zinc finger protein 580 protein-coding common_peak2_61_61_-0.283746770834093_5.81232292496983_0.495169887621129-2 chr3 32708741 32709365 + 0.495169887621129 NA intron (NM_019673, intron 1 of 13) CpG 507 NM_019673 56456 Mm.41077 NM_019673 ENSMUSG00000027671 Actl6a 2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802 actin-like 6A protein-coding common_peak1_73_51_0.223466043343106_5.81217273981265_0.495169887621104-3 chr7 67615859 67616889 + 0.495169887621104 NA intron (NM_027413, intron 5 of 5) intron (NM_027413, intron 5 of 5) 28862 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_73_51_0.223466043343106_5.81217273981265_0.495169887621104-2 chr8 86855630 86856190 + 0.495169887621104 NA intron (NM_030563, intron 2 of 6) intron (NM_030563, intron 2 of 6) 29348 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_73_51_0.223466043343106_5.81217273981265_0.495169887621104 chr17 31296164 31297245 + 0.495169887621104 NA 5' UTR (NM_001242427, exon 1 of 20) 5' UTR (NM_001242427, exon 1 of 20) 480 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_73_51_0.223466043343106_5.81217273981265_0.495169887621104-2 chr6 28423703 28424175 + 0.495169887621104 NA intron (NM_007480, intron 1 of 5) intron (NM_007480, intron 1 of 5) 335 NM_007480 11844 Mm.389075 NM_007480 ENSMUSG00000020440 Arf5 - ADP-ribosylation factor 5 protein-coding common_peak1_73_51_0.223466043343106_5.81217273981265_0.495169887621104-4 chr8 86855630 86856220 + 0.495169887621104 NA intron (NM_030563, intron 2 of 6) intron (NM_030563, intron 2 of 6) 29333 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_73_51_0.223466043343106_5.81217273981265_0.495169887621104 chr1 160195256 160195884 + 0.495169887621104 NA intron (NM_001347121, intron 1 of 2) intron (NM_001347121, intron 1 of 2) 238 NM_001347121 64659 Mm.29599 NM_025474 ENSMUSG00000058267 Mrps14 1810032L21Rik|AL022847|Rpms14 mitochondrial ribosomal protein S14 protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-8 chr4 139226258 139226771 + 0.49501414494053 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 32403 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-3 chr16 25062068 25062461 + 0.49501414494053 NA intron (NR_040374, intron 1 of 2) intron (NR_040374, intron 1 of 2) 2625 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-7 chr4 126261720 126262028 + 0.49501414494053 NA promoter-TSS (NM_013718) promoter-TSS (NM_013718) -531 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak1_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-4 chr4 133967477 133967939 + 0.49501414494053 NA intron (NM_016957, intron 1 of 5) CpG 283 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak1_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-2 chr10 68241335 68241757 + 0.49501414494053 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 37180 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-6 chr19 16253464 16253904 + 0.49501414494053 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 61320 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-5 chr5 36723026 36723503 + 0.49501414494053 NA Intergenic Intergenic 25415 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding unique_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053 chr1 181009868 181010661 + 0.49501414494053 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 7305 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding common_peak1_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-6 chr6 51470191 51470484 + 0.49501414494053 NA promoter-TSS (NM_182650) promoter-TSS (NM_182650) -279 NM_007624 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-9 chr8 105289302 105289608 + 0.49501414494053 NA promoter-TSS (NM_001166394) promoter-TSS (NM_001166394) 73 NM_001166394 74356 Mm.204876 NM_028888 ENSMUSG00000014837 4931428F04Rik AI426165|Kiaa0895l RIKEN cDNA 4931428F04 gene protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-2 chr1 135793700 135794152 + 0.49501414494053 NA Intergenic Intergenic -5495 NM_021467 21952 Mm.44379 NM_021467 ENSMUSG00000026418 Tnni1 2700018B22Rik|AI747285|ssTnI troponin I, skeletal, slow 1 protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-4 chr11 104631914 104632402 + 0.49501414494053 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 24158 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_28_31_-0.418031999049489_4.79098400047526_0.49501414494053 chr10 53629501 53629929 + 0.49501414494053 NA intron (NM_027830, intron 2 of 13) CpG 724 NM_027830 71567 Mm.278221 NM_027830 ENSMUSG00000058298 Mcm9 9030408O17Rik|Gm235|Mcmdc1 minichromosome maintenance 9 homologous recombination repair factor protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-3 chr11 35932912 35933532 + 0.49501414494053 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 46867 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053-5 chr15 79140724 79141164 + 0.49501414494053 NA promoter-TSS (NM_027231) promoter-TSS (NM_027231) 307 NM_001310581 27660 Mm.390827 NM_138581 ENSMUSG00000033029 1700088E04Rik ESTJ0827E04 RIKEN cDNA 1700088E04 gene protein-coding common_peak2_28_31_-0.418031999049489_4.79098400047526_0.49501414494053 chr1 66817164 66817570 + 0.49501414494053 NA intron (NM_001357156, intron 1 of 14) CpG 228 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-4 chr14 30561250 30561669 + 0.495014144940524 NA intron (NM_009388, intron 4 of 13) intron (NM_009388, intron 4 of 13) -10690 NR_037237 100526475 NR_037237 ENSMUSG00000093156 Mir3076 mir-3076|mmu-mir-3076 microRNA 3076 ncRNA common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-4 chr18 13384694 13385202 + 0.495014144940524 NA Intergenic Intergenic 377958 NM_153087 225192 Mm.207073 NM_153087 ENSMUSG00000037346 Hrh4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-2 chr11 12410039 12410505 + 0.495014144940524 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 1868 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_36_24_0.287104551282718_4.78740846541608_0.495014144940524-2 chr11 121260451 121260890 + 0.495014144940524 NA intron (NM_001080932, intron 1 of 8) intron (NM_001080932, intron 1 of 8) 683 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding common_peak2_36_24_0.287104551282718_4.78740846541608_0.495014144940524 chr1 152386107 152386611 + 0.495014144940524 NA intron (NM_025677, intron 1 of 4) CpG 323 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-7 chr19 4220035 4220444 + 0.495014144940524 NA exon (NM_001310038, exon 3 of 4) exon (NM_001310038, exon 3 of 4) 5850 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-6 chr7 123082795 123083366 + 0.495014144940524 NA Intergenic ID_B1|SINE|B4 -40805 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding unique_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-2 chr17 78323038 78323418 + 0.495014144940524 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 94924 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-6 chr4 154248107 154248469 + 0.495014144940524 NA intron (NM_001162977, intron 5 of 36) intron (NM_001162977, intron 5 of 36) 51607 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524 chr10 13008500 13008979 + 0.495014144940524 NA exon (NM_175102, exon 1 of 1) exon (NM_175102, exon 1 of 1) 289 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-8 chr6 31217974 31218501 + 0.495014144940524 NA non-coding (NR_110471, exon 1 of 4) non-coding (NR_110471, exon 1 of 4) 237 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-5 chr15 83100351 83100896 + 0.495014144940524 NA intron (NM_023475, intron 1 of 11) intron (NM_023475, intron 1 of 11) 418 NM_023475 68607 Mm.30056 NM_023475 ENSMUSG00000058586 Serhl 0610008B10Rik|1110019M09Rik|AU019786 serine hydrolase-like protein-coding unique_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-2 chr2 120849853 120850396 + 0.495014144940524 NA promoter-TSS (NR_038349) promoter-TSS (NR_038349) 294 NM_001024857 140810 Mm.275698 NM_080788 ENSMUSG00000090100 Ttbk2 2610507N02Rik|AI326283|B930008N24Rik|TTK|Ttbk|Ttbk1|mKIAA0847 tau tubulin kinase 2 protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-7 chr9 49813742 49814085 + 0.495014144940524 NA Intergenic Intergenic -14520 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_36_24_0.287104551282718_4.78740846541608_0.495014144940524-6 chr9 67071258 67071551 + 0.495014144940524 NA Intergenic Intergenic -22191 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-4 chr2 76675311 76675700 + 0.495014144940524 NA 5' UTR (NM_031256, exon 1 of 8) 5' UTR (NM_031256, exon 1 of 8) 190 NM_031256 83435 Mm.41636 NM_031256 ENSMUSG00000002733 Plekha3 FAPP1 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-3 chr11 67052117 67052555 + 0.495014144940524 NA promoter-TSS (NM_001040026) promoter-TSS (NM_001040026) 282 NM_025510 66358 Mm.22511 NM_025510 ENSMUSG00000020910 Adprm 2310004I24Rik|MDS006 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-5 chr7 19228978 19229379 + 0.495014144940524 NA intron (NM_207525, intron 1 of 1) intron (NM_207525, intron 1 of 1) 789 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524 chr10 77146738 77147111 + 0.495014144940524 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 19606 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-10 chr5 23616158 23616796 + 0.495014144940524 NA promoter-TSS (NM_009274) promoter-TSS (NM_009274) 94 NM_001359175 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding unique_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524 chr10 5194294 5194920 + 0.495014144940524 NA promoter-TSS (NM_001079686) promoter-TSS (NM_001079686) 100 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|KASH1|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-5 chr3 54358701 54359166 + 0.495014144940524 NA Intergenic Intergenic -2174 NM_001198766 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-3 chr14 20609196 20610185 + 0.495014144940524 NA intron (NM_030180, intron 1 of 20) intron (NM_030180, intron 1 of 20) 8664 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-2 chr10 77976036 77976419 + 0.495014144940524 NA Intergenic Intergenic -2423 NM_026431 67884 Mm.297512 NM_026431 ENSMUSG00000020284 1810043G02Rik AV026620|D10Jhu13e RIKEN cDNA 1810043G02 gene protein-coding common_peak2_36_24_0.287104551282718_4.78740846541608_0.495014144940524-3 chr4 123905115 123905652 + 0.495014144940524 NA intron (NM_019660, intron 2 of 4) CpG-10277 370 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-8 chr19 53434348 53435050 + 0.495014144940524 NA Intergenic Intergenic 30097 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-11 chr9 88522419 88522864 + 0.495014144940524 NA non-coding (NR_040721, exon 1 of 5) non-coding (NR_040721, exon 1 of 5) 256 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-9 chr3 132876428 132877218 + 0.495014144940524 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 1773 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524 chr1 120025013 120025538 + 0.495014144940524 NA intron (NM_001012322, intron 3 of 13) intron (NM_001012322, intron 3 of 13) 18295 NM_001012322 319229 Mm.189223 NM_001012322 ENSMUSG00000026387 Sctr 6530402O03Rik secretin receptor protein-coding common_peak2_36_24_0.287104551282718_4.78740846541608_0.495014144940524-4 chr7 98415973 98416249 + 0.495014144940524 NA Intergenic Intergenic -24305 NM_001130693 14918 Mm.389928 NM_001034890 ENSMUSG00000074003 Gucy2d - guanylate cyclase 2d protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-2 chr10 68165932 68166443 + 0.495014144940524 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 112539 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-12 chr9 92272629 92273117 + 0.495014144940524 NA TTS (NM_011636) TTS (NM_011636) -2729 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-8 chrX 142897156 142897526 + 0.495014144940524 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 69387 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-9 chr9 21265363 21265776 + 0.495014144940524 NA exon (NM_153583, exon 1 of 10) exon (NM_153583, exon 1 of 10) 284 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-7 chr5 149622977 149623628 + 0.495014144940524 NA intron (NM_001347534, intron 11 of 16) intron (NM_001347534, intron 11 of 16) 13013 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding unique_peak1_37_24_0.325307264770423_4.80650982215994_0.495014144940524-3 chr2 117018767 117019516 + 0.495014144940524 NA Intergenic Intergenic -101930 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524-3 chr11 106612508 106612903 + 0.495014144940524 NA intron (NM_198292, intron 1 of 11) CpG 225 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_36_24_0.287104551282718_4.78740846541608_0.495014144940524-5 chr7 139780598 139781134 + 0.495014144940524 NA Intergenic Intergenic 1848 NR_105827 102465215 NR_105827 ENSMUSG00000098619 Mir6401 Gm27442|mmu-mir-6401 microRNA 6401 ncRNA common_peak1_36_24_0.287104551282718_4.78740846541608_0.495014144940524-6 chr17 3419056 3419419 + 0.495014144940524 NA intron (NM_011878, intron 3 of 26) intron (NM_011878, intron 3 of 26) 22030 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_37_24_0.325307264770423_4.80650982215994_0.495014144940524 chr1 88879305 88879740 + 0.495014144940524 NA Intergenic Intergenic 124632 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak1_346_260_0.109610314376349_8.08271115375806_0.49499336020852 chr8 92847767 92849330 + 0.49499336020852 NA intron (NM_008610, intron 11 of 12) intron (NM_008610, intron 11 of 12) -6785 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak1_451_392_-0.102172759744844_8.56729912238618_0.494724366238247 chr2 60697192 60701430 + 0.494724366238247 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 23292 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_49_50_-0.310126479819187_5.5173621020619_0.494631242176868 chr9 22306916 22307653 + 0.494631242176868 NA intron (NM_145612, intron 1 of 7) intron (NM_145612, intron 1 of 7) 354 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding common_peak2_49_50_-0.310126479819187_5.5173621020619_0.494631242176868-2 chr19 53450684 53451334 + 0.494631242176868 NA non-coding (NR_028427, exon 5 of 10) non-coding (NR_028427, exon 5 of 10) 13787 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_60_41_0.254838646524115_5.51973674604082_0.494631242176868-3 chr9 95512124 95512574 + 0.494631242176868 NA promoter-TSS (NM_001114977) promoter-TSS (NM_001114977) -353 NM_001357974 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak2_49_50_-0.310126479819187_5.5173621020619_0.494631242176868-4 chr8 123806065 123806579 + 0.494631242176868 NA intron (NM_009003, intron 1 of 7) intron (NM_009003, intron 1 of 7) 326 NM_009003 19341 Mm.9221 NM_009003 ENSMUSG00000019478 Rab4a AI848268|Rab4 RAB4A, member RAS oncogene family protein-coding common_peak1_60_41_0.254838646524115_5.51973674604082_0.494631242176868 chr14 54253188 54253820 + 0.494631242176868 NA promoter-TSS (NM_001205181) promoter-TSS (NM_001205181) 425 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_60_41_0.254838646524115_5.51973674604082_0.494631242176868-2 chr8 94532628 94533089 + 0.494631242176868 NA promoter-TSS (NM_153507) promoter-TSS (NM_153507) -170 NM_153507 234577 Mm.291815 NM_153507 ENSMUSG00000034361 Cpne2 3322401K10Rik copine II protein-coding common_peak2_49_50_-0.310126479819187_5.5173621020619_0.494631242176868-3 chr3 83055565 83056183 + 0.494631242176868 NA intron (NM_016784, intron 1 of 14) intron (NM_016784, intron 1 of 14) 336 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding common_peak1_60_41_0.254838646524115_5.51973674604082_0.494631242176868-2 chr17 47687284 47688045 + 0.494631242176868 NA promoter-TSS (NR_045945) promoter-TSS (NR_045945) 54 NR_045945 100415787 Mm.392206 NR_045945 ENSMUSG00000084880 Tomm6os Gm14872|Prickle4os translocase of outer mitochondrial membrane 6, opposite strand ncRNA common_peak2_49_50_-0.310126479819187_5.5173621020619_0.494631242176868 chr11 95079262 95080037 + 0.494631242176868 NA Intergenic Intergenic -2838 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_60_41_0.254838646524115_5.51973674604082_0.494631242176868 chr2 155956254 155956930 + 0.494631242176868 NA promoter-TSS (NM_001129999) promoter-TSS (NM_001129999) 34 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak2_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-3 chr11 96281192 96282169 + 0.494448899774786 NA promoter-TSS (NM_010461) promoter-TSS (NM_010461) -225 NM_010461 15416 Mm.4822 NM_010461 ENSMUSG00000056648 Hoxb8 Hox-2.4 homeobox B8 protein-coding common_peak1_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-3 chr5 64111887 64112300 + 0.494448899774786 NA exon (NM_001356964, exon 13 of 15) exon (NM_001356964, exon 13 of 15) 19154 NM_001356964 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak2_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-2 chr10 93308790 93309330 + 0.494448899774786 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 2099 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak2_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-4 chr19 46338269 46338652 + 0.494448899774786 NA intron (NM_001164290, intron 1 of 9) CpG 200 NM_001164294 67116 Mm.218848 NM_024192 ENSMUSG00000036748 Cuedc2 3010002G01Rik CUE domain containing 2 protein-coding common_peak2_38_40_-0.351178227935515_5.18196289065033_0.494448899774786 chr1 86486820 86487404 + 0.494448899774786 NA Intergenic Intergenic -39445 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-4 chr5 72167598 72168113 + 0.494448899774786 NA intron (NM_178599, intron 1 of 4) CpG 334 NM_001356611 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak1_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-2 chr14 27039161 27039819 + 0.494448899774786 NA intron (NM_134437, intron 1 of 12) CpG 489 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak1_38_40_-0.351178227935515_5.18196289065033_0.494448899774786 chr1 86486916 86487399 + 0.494448899774786 NA Intergenic Intergenic -39400 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_38_40_-0.351178227935515_5.18196289065033_0.494448899774786-5 chr7 110164478 110164809 + 0.494448899774786 NA Intergenic Intergenic 42584 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-3 chr17 26507809 26508355 + 0.49444889977478 NA exon (NM_013642, exon 1 of 4) exon (NM_013642, exon 1 of 4) 390 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-3 chr7 44857079 44857756 + 0.49444889977478 NA promoter-TSS (NM_001290767) promoter-TSS (NM_001290767) 14 NM_001290767 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding common_peak2_48_32_0.288964024007601_5.18887613136225_0.49444889977478-3 chr2 27318174 27318553 + 0.49444889977478 NA intron (NR_133905, intron 3 of 29) intron (NR_133905, intron 3 of 29) -71060 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478-4 chr13 85431219 85431717 + 0.49444889977478 NA Intergenic Intergenic -141982 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-6 chr7 49271269 49272222 + 0.49444889977478 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 25556 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478-5 chr13 112447394 112447877 + 0.49444889977478 NA Intergenic Intergenic -16435 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478 chr16 24766398 24767142 + 0.49444889977478 NA intron (NM_178665, intron 8 of 12) intron (NM_178665, intron 8 of 12) 44915 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_48_32_0.288964024007601_5.18887613136225_0.49444889977478-3 chr9 123717020 123717568 + 0.49444889977478 NA intron (NM_033322, intron 1 of 9) intron (NM_033322, intron 1 of 9) 331 NM_033322 93730 Mm.378263 NM_033322 ENSMUSG00000025245 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545 leucine zipper transcription factor-like 1 protein-coding common_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478-2 chr11 75399579 75400410 + 0.49444889977478 NA intron (NM_001102611, intron 6 of 10) intron (NM_001102611, intron 6 of 10) 22629 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-5 chr5 35041607 35042124 + 0.49444889977478 NA intron (NM_019447, intron 1 of 13) intron (NM_019447, intron 1 of 13) 356 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak2_48_32_0.288964024007601_5.18887613136225_0.49444889977478-4 chr4 33310421 33310841 + 0.49444889977478 NA intron (NM_001305273, intron 1 of 15) CpG 320 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak2_48_32_0.288964024007601_5.18887613136225_0.49444889977478 chr19 60756025 60756552 + 0.49444889977478 NA exon (NM_178421, exon 1 of 1) exon (NM_178421, exon 1 of 1) 301 NM_178421 332397 Mm.186390 NM_178421 ENSMUSG00000072437 Nanos1 NOS-1 nanos C2HC-type zinc finger 1 protein-coding unique_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-2 chr19 32305391 32305942 + 0.49444889977478 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 43650 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478-3 chr11 80779346 80779695 + 0.49444889977478 NA intron (NM_177390, intron 1 of 21) intron (NM_177390, intron 1 of 21) 505 NM_177390 338367 Mm.151948 NM_177390 ENSMUSG00000035441 Myo1d 9930104H07Rik|AW544947|D11Ertd9e|myosin-1d myosin ID protein-coding common_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-2 chr17 15041735 15042686 + 0.49444889977478 NA promoter-TSS (NM_011560) promoter-TSS (NM_011560) 570 NM_001360401 381062 Mm.393767 NM_183133 ENSMUSG00000036552 Ermard 2210404J11Rik|2410011O22Rik|AI448938 ER membrane associated RNA degradation protein-coding unique_peak1_48_32_0.288964024007601_5.18887613136225_0.49444889977478 chr19 28646651 28647102 + 0.49444889977478 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -31348 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478 chr10 80433747 80433990 + 0.49444889977478 NA promoter-TSS (NM_001164151) promoter-TSS (NM_001164151) -215 NM_001164148 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding unique_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478 chr19 5601920 5602541 + 0.49444889977478 NA TTS (NR_037603) TTS (NR_037603) 357 NM_026616 68209 Mm.246200 NM_026616 ENSMUSG00000024925 Rnaseh2c 1500026D16Rik|AYP1 ribonuclease H2, subunit C protein-coding common_peak1_48_32_0.288964024007601_5.18887613136225_0.49444889977478 chr14 30564692 30565236 + 0.49444889977478 NA intron (NM_009388, intron 4 of 13) intron (NM_009388, intron 4 of 13) -7185 NR_037237 100526475 NR_037237 ENSMUSG00000093156 Mir3076 mir-3076|mmu-mir-3076 microRNA 3076 ncRNA common_peak2_47_32_0.259426547513552_5.17410739311523_0.49444889977478-6 chr2 117839099 117839931 + 0.49444889977478 NA intron (NR_040631, intron 2 of 5) intron (NR_040631, intron 2 of 5) 17587 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_48_32_0.288964024007601_5.18887613136225_0.49444889977478-2 chr4 89441159 89441620 + 0.49444889977478 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -130357 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478-4 chr4 149875933 149876439 + 0.49444889977478 NA Intergenic Intergenic 78820 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak2_48_32_0.288964024007601_5.18887613136225_0.49444889977478-2 chr2 10080647 10081092 + 0.49444889977478 NA promoter-TSS (NM_020615) promoter-TSS (NM_020615) 257 NM_025280 16588 Mm.35498 NM_025280 ENSMUSG00000037262 Kin Kin17 Kin17 DNA and RNA binding protein protein-coding common_peak1_47_32_0.259426547513552_5.17410739311523_0.49444889977478 chr15 6564606 6564960 + 0.49444889977478 NA Intergenic Intergenic -15064 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Fyb1|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak2_48_32_0.288964024007601_5.18887613136225_0.49444889977478-5 chr8 126422507 126422942 + 0.49444889977478 NA exon (NM_174987, exon 1 of 2) exon (NM_174987, exon 1 of 2) 223 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak2_212_191_-0.146561136360214_7.51168193254105_0.494393754694413 chr18 50062974 50065405 + 0.494393754694413 NA intron (NM_134131, intron 1 of 1) intron (NM_134131, intron 1 of 1) -10527 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak1_320_283_-0.123800459821313_8.08784688959403_0.494279869725507 chr1 135765547 135767977 + 0.494279869725507 NA exon (NM_013750, exon 1 of 2) exon (NM_013750, exon 1 of 2) 677 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak1_163_119_0.157013992418675_6.98539759181786_0.49425842776466 chr3 121953338 121955298 + 0.49425842776466 NA intron (NM_172525, intron 1 of 22) intron (NM_172525, intron 1 of 22) 1089 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_90_87_-0.239289374181299_6.33978693154665_0.494226669520052 chr16 36071158 36072040 + 0.494226669520052 NA promoter-TSS (NM_027342) promoter-TSS (NM_027342) -61 NM_198645 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak2_91_87_-0.223633296414286_6.34761497043015_0.494226669520052-2 chr4 117155386 117156366 + 0.494226669520052 NA promoter-TSS (NR_030704) promoter-TSS (NR_030704) -28 NR_030704 100216533 NR_030704 ENSMUSG00000092680 Snord55 - small nucleolar RNA, C/D box 55 snoRNA common_peak2_90_87_-0.239289374181299_6.33978693154665_0.494226669520052 chr11 107479509 107480350 + 0.494226669520052 NA intron (NM_025894, intron 1 of 10) intron (NM_025894, intron 1 of 10) 401 NM_025894 66997 Mm.491171 NM_025894 ENSMUSG00000020720 Psmd12 1500002F15Rik|AI480719|P55 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 protein-coding common_peak2_90_87_-0.239289374181299_6.33978693154665_0.494226669520052-2 chr12 84847314 84848271 + 0.494226669520052 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -28010 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak1_105_75_0.190787562253031_6.3433212945701_0.494226669520052 chr3 96245543 96246443 + 0.494226669520052 NA promoter-TSS (NM_178216).2 promoter-TSS (NM_178216).2 496 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_105_75_0.190787562253031_6.3433212945701_0.494226669520052-2 chr7 140941360 140942808 + 0.494226669520052 NA intron (NR_153832, intron 1 of 11) intron (NR_153832, intron 1 of 11) 693 NM_145387 212974 Mm.260139 NM_145387 ENSMUSG00000062031 Pgghg 5730511L01Rik|Athl1|BC023151 protein glucosylgalactosylhydroxylysine glucosidase protein-coding common_peak2_90_87_-0.239289374181299_6.33978693154665_0.494226669520052-3 chr19 46304729 46305556 + 0.494226669520052 NA promoter-TSS (NM_001177370) promoter-TSS (NM_001177370) 405 NM_001177369 18034 Mm.102365 NM_019408 ENSMUSG00000025225 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 protein-coding common_peak2_91_87_-0.223633296414286_6.34761497043015_0.494226669520052 chr15 5115612 5116449 + 0.494226669520052 NA promoter-TSS (NM_026069) promoter-TSS (NM_026069) -583 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding common_peak2_105_75_0.190787562253031_6.3433212945701_0.494226669520052 chr19 42518856 42519494 + 0.494226669520052 NA intron (NM_177464, intron 1 of 6) CpG 370 NM_177464 52013 Mm.254169 NM_177464 ENSMUSG00000025184 R3hcc1l 1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88 R3H domain and coiled-coil containing 1 like protein-coding common_peak1_188_171_-0.159113833801053_7.34670783780157_0.494212154197458 chr1 43163236 43164877 + 0.494212154197458 NA promoter-TSS (NM_010212) promoter-TSS (NM_010212) -95 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_263_235_-0.136742003683814_7.81427204751993_0.494113361263864 chr1 134099483 134101368 + 0.494113361263864 NA Intergenic Intergenic -10817 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak2_528_456_-0.0944937548298448_8.78880347764315_0.4936452836868 chr17 34119608 34122730 + 0.4936452836868 NA intron (NM_001204973, intron 1 of 12) CpG-6274 578 NM_010238 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak2_235_174_0.134080014343862_7.51825111900426_0.493336266580755 chr3 16182752 16184582 + 0.493336266580755 NA intron (NM_001358043, intron 1 of 4) CpG 502 NM_172677 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding common_peak2_108_102_-0.207805642054772_6.58259770615583_0.493314134281197 chr13 34874708 34876050 + 0.493314134281197 NA promoter-TSS (NM_013830) promoter-TSS (NM_013830) -115 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding common_peak2_108_102_-0.207805642054772_6.58259770615583_0.493314134281197-3 chr6 136827015 136828151 + 0.493314134281197 NA intron (NM_021714, intron 1 of 11) intron (NM_021714, intron 1 of 11) 633 NM_021714 60321 Mm.141197 NM_021714 ENSMUSG00000030216 Wbp11 2510026P17Rik|D6Wsu113e|Npwbp|SIPP1 WW domain binding protein 11 protein-coding common_peak2_108_102_-0.207805642054772_6.58259770615583_0.493314134281197-2 chr3 110250217 110251006 + 0.493314134281197 NA non-coding (NR_024139, exon 1 of 2) non-coding (NR_024139, exon 1 of 2) 388 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding common_peak1_124_89_0.183047685003269_6.58337693883131_0.493314134281172 chr3 65391471 65392623 + 0.493314134281172 NA intron (NM_026155, intron 1 of 4) intron (NM_026155, intron 1 of 4) 506 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding common_peak1_124_89_0.183047685003269_6.58337693883131_0.493314134281172-2 chr4 150048400 150049659 + 0.493314134281172 NA Intergenic CpG -19425 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak2_124_89_0.183047685003269_6.58337693883131_0.493314134281172-2 chr4 116650710 116651952 + 0.493314134281172 NA intron (NM_021473, intron 1 of 8) intron (NM_021473, intron 1 of 8) 343 NM_021473 58810 Mm.30085 NM_021473 ENSMUSG00000028692 Akr1a1 2610201A18Rik|Akr1a4 aldo-keto reductase family 1, member A1 (aldehyde reductase) protein-coding common_peak2_124_89_0.183047685003269_6.58337693883131_0.493314134281172 chr3 65391487 65392651 + 0.493314134281172 NA intron (NM_026155, intron 1 of 4) intron (NM_026155, intron 1 of 4) 484 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding common_peak2_76_74_-0.247984238324691_6.10482657133353_0.493023576869589 chr4 89137115 89138472 + 0.493023576869589 NA intron (NM_024433, intron 1 of 7) CpG 423 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding common_peak1_89_63_0.204313167853339_6.10215658392667_0.493023576869589 chr10 69670365 69671358 + 0.493023576869589 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 137153 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding common_peak1_76_74_-0.247984238324691_6.10482657133353_0.493023576869589-2 chr18 37643533 37644121 + 0.493023576869589 NA intron (NM_175770, intron 1 of 1) intron (NM_175770, intron 1 of 1) 377 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak1_89_63_0.204313167853339_6.10215658392667_0.493023576869589-2 chr15 101077907 101078914 + 0.493023576869589 NA Intergenic CpG -24011 NM_001214911 668225 Mm.385011 NM_001214911 ENSMUSG00000095440 Fignl2 EG668225 fidgetin-like 2 protein-coding common_peak1_76_74_-0.247984238324691_6.10482657133353_0.493023576869589 chr1 190928037 190928794 + 0.493023576869589 NA promoter-TSS (NM_001357131) promoter-TSS (NM_001357131) -75 NM_001357132 52477 Mm.289914 NM_021421 ENSMUSG00000026634 Angel2 2610307I21Rik|5730410O10Rik|AI845692|D1Ertd396e|D1Ertd654e angel homolog 2 protein-coding common_peak2_76_74_-0.247984238324691_6.10482657133353_0.493023576869589-2 chr9 20898046 20898582 + 0.493023576869589 NA intron (NM_016876, intron 2 of 10) CpG 276 NM_016876 53356 Mm.427309 NM_016876 ENSMUSG00000070319 Eif3g 44kDa|D0Jmb4|Eif3s4|TU-189B2|eIF3-p44|p44 eukaryotic translation initiation factor 3, subunit G protein-coding common_peak2_126_118_-0.197178141734028_6.79622869244093_0.492872854222073 chr10 127041026 127042586 + 0.492872854222073 NA promoter-TSS (NM_001205036) promoter-TSS (NM_001205036) -126 NM_010792 17299 Mm.251593 NM_010792 ENSMUSG00000006732 Mettl1 2810012D02Rik methyltransferase like 1 protein-coding common_peak2_143_104_0.163355771860094_6.79592340359617_0.492872854222048 chr2 181364754 181366227 + 0.492872854222048 NA promoter-TSS (NM_001165991) promoter-TSS (NM_001165991) 67 NM_001048148 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding common_peak2_187_137_0.151026887377397_7.18403790046687_0.492815963041668 chr11 118361629 118363330 + 0.492815963041668 NA Intergenic Intergenic -7068 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_165_120_0.16240540404308_7.00006593929613_0.492741151861452 chr8 46162849 46164322 + 0.492741151861452 NA promoter-TSS (NM_001357215) promoter-TSS (NM_001357215) -66 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding common_peak2_106_76_0.185379496334257_6.35947628886203_0.491866367289398-2 chr10 121586225 121587308 + 0.491866367289398 NA promoter-TSS (NM_019786) promoter-TSS (NM_019786) 28 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak2_106_76_0.185379496334257_6.35947628886203_0.491866367289398 chr1 189728342 189729414 + 0.491866367289398 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 610 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak1_106_76_0.185379496334257_6.35947628886203_0.491866367289398 chr11 61578720 61579637 + 0.491866367289398 NA intron (NM_001252188, intron 1 of 10) CpG 509 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding common_peak1_106_76_0.185379496334257_6.35947628886203_0.491866367289398-2 chr15 73245799 73246604 + 0.491866367289398 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 8681 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak1_92_88_-0.224448289186161_6.36350928637332_0.491866367289398 chr8 123717691 123718544 + 0.491866367289398 NA Intergenic Intergenic -15841 NR_040702 234863 Mm.246601 NR_040702 ENSMUSG00000110599 6030466F02Rik - RIKEN cDNA 6030466F02 gene ncRNA common_peak1_211_156_0.137039347231744_7.3631404225075_0.491861328149866 chr19 8988662 8990100 + 0.491861328149866 NA promoter-TSS (NM_001286518) promoter-TSS (NM_001286518) 97 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_75_52_0.234188020408704_5.84501446476755_0.491755066901284-2 chr3 95065300 95066488 + 0.491755066901284 NA intron (NM_001293707, intron 9 of 14) intron (NM_001293707, intron 9 of 14) -23280 NM_008951 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak2_74_52_0.215214009816564_5.83552745947148_0.491755066901284 chr11 79646848 79647521 + 0.491755066901284 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -24021 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak2_75_52_0.234188020408704_5.84501446476755_0.491755066901284 chr1 132417513 132418170 + 0.491755066901284 NA exon (NM_172516, exon 1 of 13) exon (NM_172516, exon 1 of 13) 388 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding common_peak2_74_52_0.215214009816564_5.83552745947148_0.491755066901284-2 chr3 130060972 130061860 + 0.491755066901284 NA promoter-TSS (NM_207209) promoter-TSS (NM_207209) -509 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak2_62_62_-0.283909625253083_5.83532511087338_0.491755066901284-2 chr9 43239043 43240405 + 0.491755066901284 NA promoter-TSS (NM_178644) promoter-TSS (NM_178644) 92 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak1_75_52_0.234188020408704_5.84501446476755_0.491755066901284-4 chr8 94917737 94918305 + 0.491755066901284 NA promoter-TSS (NM_001033533) promoter-TSS (NM_001033533) 77 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding common_peak2_62_62_-0.283909625253083_5.83532511087338_0.491755066901284 chr17 66448357 66449399 + 0.491755066901284 NA exon (NM_001114098, exon 1 of 15) exon (NM_001114098, exon 1 of 15) 872 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_75_52_0.234188020408704_5.84501446476755_0.491755066901284-3 chr7 37769087 37770444 + 0.491755066901284 NA promoter-TSS (NM_172385) promoter-TSS (NM_172385) -13 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak1_74_52_0.215214009816564_5.83552745947148_0.491755066901284 chr8 121902341 121903327 + 0.491755066901284 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 4852 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_74_52_0.215214009816564_5.83552745947148_0.491755066901284 chr16 65814674 65815654 + 0.491755066901284 NA promoter-TSS (NM_028572) promoter-TSS (NM_028572) -469 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak2_75_52_0.234188020408704_5.84501446476755_0.491755066901284-2 chr17 70738831 70739375 + 0.491755066901284 NA intron (NM_001347411, intron 9 of 14) B1_Mus2|SINE|Alu 107674 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_75_52_0.234188020408704_5.84501446476755_0.491755066901284 chr12 55820392 55821268 + 0.491755066901284 NA 5' UTR (NM_019994, exon 1 of 41) 5' UTR (NM_019994, exon 1 of 41) 686 NM_019994 56784 Mm.292180 NM_019994 ENSMUSG00000021027 Ralgapa1 2310003F20Rik|4930400K19Rik|AI563624|GRIPE|Garnl1|Tulip1|mKIAA0884 Ral GTPase activating protein, alpha subunit 1 protein-coding common_peak1_188_138_0.148209848177538_7.19304599681228_0.491501038794317 chr9 107632645 107635093 + 0.491501038794317 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 1473 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_125_90_0.178520678474895_6.59705497943614_0.491318514483967-2 chr2 163995204 163996134 + 0.491318514483967 NA intron (NM_018753, intron 1 of 5) CpG 472 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding common_peak1_125_90_0.178520678474895_6.59705497943614_0.491318514483967 chr9 120571513 120572454 + 0.491318514483967 NA intron (NM_025974, intron 1 of 5) intron (NM_025974, intron 1 of 5) 466 NM_025974 67115 Mm.289810 NM_025974 ENSMUSG00000025794 Rpl14 3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14 ribosomal protein L14 protein-coding common_peak2_125_90_0.178520678474895_6.59705497943614_0.491318514483967 chr16 95702296 95703416 + 0.491318514483967 NA intron (NM_011809, intron 1 of 9) CpG 449 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak1_147_136_-0.181181301049572_7.00744143243574_0.491247531804488 chr11 70653085 70654522 + 0.491247531804488 NA intron (NM_011072, intron 1 of 2) CpG 847 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak1_145_105_0.169440001429484_6.81264045527794_0.491157725597945-2 chr15 102518251 102519384 + 0.491157725597945 NA intron (NM_001253795, intron 1 of 6) intron (NM_001253795, intron 1 of 6) 625 NM_009319 21357 Mm.291485 NM_009319 ENSMUSG00000023051 Tarbp2 Prbp|TRBP TARBP2, RISC loading complex RNA binding subunit protein-coding common_peak2_145_105_0.169440001429484_6.81264045527794_0.491157725597945 chr7 134224591 134225569 + 0.491157725597945 NA promoter-TSS (NM_007400) promoter-TSS (NM_007400) 17 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_145_105_0.169440001429484_6.81264045527794_0.491157725597945 chr10 24463442 24465731 + 0.491157725597945 NA Intergenic Intergenic -130856 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_61_42_0.244184784850684_5.54835714712744_0.490454554604827 chr7 82463889 82464422 + 0.490454554604827 NA intron (NM_001190374, intron 6 of 29) intron (NM_001190374, intron 6 of 29) 128461 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_50_51_-0.309773258577185_5.5455530888525_0.490454554604827-2 chr3 108209918 108210454 + 0.490454554604827 NA intron (NM_175183, intron 1 of 11) CpG 341 NM_001289545 72522 Mm.187326 NM_175183 ENSMUSG00000048997 Atxn7l2 2610528J18Rik ataxin 7-like 2 protein-coding common_peak1_61_42_0.244184784850684_5.54835714712744_0.490454554604827-2 chr9 57643487 57644123 + 0.490454554604827 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 1848 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_61_42_0.244184784850684_5.54835714712744_0.490454554604827 chr12 3570863 3571360 + 0.490454554604827 NA Intergenic Intergenic -1280 NM_001162465 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak2_61_42_0.244184784850684_5.54835714712744_0.490454554604827-2 chr4 40757368 40757829 + 0.490454554604827 NA intron (NM_021535, intron 1 of 11) CpG 287 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_50_51_-0.309773258577185_5.5455530888525_0.490454554604827 chr13 49187578 49187934 + 0.490454554604827 NA intron (NM_013610, intron 1 of 3) CpG 209 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak2_50_51_-0.309773258577185_5.5455530888525_0.490454554604827 chr3 88834845 88835591 + 0.490454554604827 NA promoter-TSS (NM_001242372) promoter-TSS (NM_001242372) -13 NM_027389 76022 Mm.126870 NM_027389 ENSMUSG00000054199 Gon4l 1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005 gon-4-like (C.elegans) protein-coding common_peak1_50_51_-0.309773258577185_5.5455530888525_0.490454554604827-2 chr4 149165893 149166600 + 0.490454554604827 NA promoter-TSS (NM_001356332) promoter-TSS (NM_001356332) -164 NM_001356332 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak2_50_51_-0.309773258577185_5.5455530888525_0.490454554604827-3 chr4 130107694 130108010 + 0.490454554604827 NA intron (NM_026441, intron 1 of 4) CpG 296 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak1_90_64_0.197774431427544_6.12125502874223_0.490255246984408-3 chr5 92932213 92932943 + 0.490255246984408 NA intron (NM_001077596, intron 2 of 9) RSINE1|SINE|B4 34585 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_90_64_0.197774431427544_6.12125502874223_0.490255246984408-4 chr8 105606547 105607618 + 0.490255246984408 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 1853 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak2_90_64_0.197774431427544_6.12125502874223_0.490255246984408 chr9 70241597 70242414 + 0.490255246984408 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 34655 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_90_64_0.197774431427544_6.12125502874223_0.490255246984408-5 chr9 21167887 21168662 + 0.490255246984408 NA intron (NM_183408, intron 1 of 14) intron (NM_183408, intron 1 of 14) 2560 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_90_64_0.197774431427544_6.12125502874223_0.490255246984408-2 chr16 44723808 44724922 + 0.490255246984408 NA promoter-TSS (NM_145972) promoter-TSS (NM_145972) 64 NM_145972 212547 Mm.310573 NM_145972 ENSMUSG00000036208 Nepro - nucleolus and neural progenitor protein protein-coding common_peak1_91_64_0.213430509194557_6.12908306762573_0.490255246984408 chr12 59067053 59067823 + 0.490255246984408 NA intron (NM_008891, intron 1 of 8) CpG 519 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak2_77_75_-0.248608716334261_6.12362315527646_0.490255246984408 chr4 87982427 87983720 + 0.490255246984408 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 50334 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak2_77_75_-0.248608716334261_6.12362315527646_0.490255246984408-2 chr6 142367208 142368632 + 0.490255246984408 NA intron (NM_001355511, intron 8 of 14) intron (NM_001355511, intron 8 of 14) 19022 NM_001355511 19691 Mm.27407 NM_023042 ENSMUSG00000030243 Recql RecQ1 RecQ protein-like protein-coding common_peak1_91_64_0.213430509194557_6.12908306762573_0.490255246984408-2 chr18 33291621 33292903 + 0.490255246984408 NA Intergenic Intergenic -78400 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak1_90_64_0.197774431427544_6.12125502874223_0.490255246984408 chr14 57826077 57827118 + 0.490255246984408 NA promoter-TSS (NM_198605) promoter-TSS (NM_198605) 358 NM_026401 67840 Mm.319530 NM_026401 ENSMUSG00000021967 Mrpl57 2610025P17Rik|AV005697|Mrp63 mitochondrial ribosomal protein L57 protein-coding common_peak2_239_177_0.133634175512999_7.5425505187229_0.490232108329943 chr15 37006496 37008068 + 0.490232108329943 NA 5' UTR (NM_026521, exon 1 of 4) 5' UTR (NM_026521, exon 1 of 4) 120 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak1_93_89_-0.225246772600864_6.37922971002924_0.489563090914018 chr10 80071427 80072753 + 0.489563090914018 NA intron (NM_001359635, intron 5 of 31) intron (NM_001359635, intron 5 of 31) 3349 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak2_108_77_0.193292666266197_6.38204855199535_0.489563090914018 chr1 160213090 160213957 + 0.489563090914018 NA promoter-TSS (NM_009786) promoter-TSS (NM_009786) -631 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak2_108_77_0.193292666266197_6.38204855199535_0.489563090914018-2 chr15 63399851 63400499 + 0.489563090914018 NA Intergenic Intergenic 79433 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA common_peak1_129_120_-0.187778123212091_6.82497417566855_0.489473012191681 chr15 98662144 98662880 + 0.489473012191681 NA intron (NM_001080981, intron 1 of 16) intron (NM_001080981, intron 1 of 16) 377 NM_001080981 74351 Mm.45725 NM_001080981 ENSMUSG00000003360 Ddx23 3110082M05Rik|4921506D17Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 protein-coding common_peak2_129_120_-0.187778123212091_6.82497417566855_0.489473012191681-2 chr15 98662097 98662871 + 0.489473012191681 NA intron (NM_001080981, intron 1 of 16) intron (NM_001080981, intron 1 of 16) 405 NM_001080981 74351 Mm.45725 NM_001080981 ENSMUSG00000003360 Ddx23 3110082M05Rik|4921506D17Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 protein-coding common_peak2_129_120_-0.187778123212091_6.82497417566855_0.489473012191681 chr1 6286552 6287948 + 0.489473012191681 NA Intergenic Intergenic -72081 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak2_146_106_0.165671779619118_6.82430287621071_0.489473012191657 chr8 106935403 106936900 + 0.489473012191657 NA exon (NM_009229, exon 1 of 7) exon (NM_009229, exon 1 of 7) 401 NM_009229 20650 Mm.30228 NM_009229 ENSMUSG00000041308 Sntb2 Snt2 syntrophin, basic 2 protein-coding common_peak1_146_106_0.165671779619118_6.82430287621071_0.489473012191657 chr8 121241893 121243156 + 0.489473012191657 NA Intergenic Intergenic 114839 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_126_91_0.174077665516903_6.61060078881546_0.489363922741936 chr1 6214207 6215368 + 0.489363922741936 NA 5' UTR (NM_009826, exon 1 of 24) 5' UTR (NM_009826, exon 1 of 24) 125 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_126_91_0.174077665516903_6.61060078881546_0.489363922741936 chr1 184077190 184078174 + 0.489363922741936 NA Intergenic Intergenic 43301 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_49_33_0.27483602090197_5.22488085170132_0.489200556185773-3 chr18 46676328 46677412 + 0.489200556185773 NA Intergenic Intergenic 51632 NM_033037 12583 Mm.241056 NM_033037 ENSMUSG00000033022 Cdo1 1300002L19Rik|Cdo|D18Ucla3 cysteine dioxygenase 1, cytosolic protein-coding common_peak1_49_33_0.27483602090197_5.22488085170132_0.489200556185773-2 chr16 87553254 87554072 + 0.489200556185773 NA intron (NM_144854, intron 1 of 4) intron (NM_144854, intron 1 of 4) 333 NM_144854 224419 Mm.194466 NM_144854 ENSMUSG00000025610 Map3k7cl C21orf7|ORF63|Tak1l Map3k7 C-terminal like protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-6 chr8 109155788 109156506 + 0.489200556185773 NA intron (NR_151498, intron 1 of 4) L3b|LINE|CR1 80925 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-9 chr9 107699863 107700254 + 0.489200556185773 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 5533 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_39_41_-0.349675459380331_5.2174796930886_0.489200556185773 chr4 9068172 9068851 + 0.489200556185773 NA Intergenic GA-rich|Low_complexity|Low_complexity -200782 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-5 chr8 8334659 8335100 + 0.489200556185773 NA Intergenic Intergenic 325894 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak1_49_33_0.27483602090197_5.22488085170132_0.489200556185773-4 chr5 110448113 110448461 + 0.489200556185773 NA 5' UTR (NM_001142642, exon 1 of 19) 5' UTR (NM_001142642, exon 1 of 19) 216 NM_001317042 381668 Mm.348782 NM_028596 ENSMUSG00000043323 Fbrsl1 2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545 fibrosin-like 1 protein-coding common_peak2_39_41_-0.349675459380331_5.2174796930886_0.489200556185773 chr1 38440403 38440985 + 0.489200556185773 NA intron (NM_001290814, intron 4 of 21) intron (NM_001290814, intron 4 of 21) 186550 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding common_peak1_39_41_-0.349675459380331_5.2174796930886_0.489200556185773-2 chr4 152258676 152259339 + 0.489200556185773 NA intron (NM_133348, intron 7 of 8) intron (NM_133348, intron 7 of 8) -15355 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-2 chr15 66806586 66807063 + 0.489200556185773 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 25005 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_39_41_-0.349675459380331_5.2174796930886_0.489200556185773-2 chr10 24149449 24149961 + 0.489200556185773 NA 5' UTR (NM_016797, exon 1 of 10) 5' UTR (NM_016797, exon 1 of 10) 388 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773 chr15 25366266 25366824 + 0.489200556185773 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 47219 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_39_41_-0.349675459380331_5.2174796930886_0.489200556185773-5 chr5 33658136 33658424 + 0.489200556185773 NA promoter-TSS (NM_001356983) promoter-TSS (NM_001356983) 152 NM_001040435 21335 Mm.379024 NM_011524 ENSMUSG00000037313 Tacc3 Aint|C86661|Eric1 transforming, acidic coiled-coil containing protein 3 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-7 chr8 120064548 120065137 + 0.489200556185773 NA Intergenic Intergenic 36630 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_39_41_-0.349675459380331_5.2174796930886_0.489200556185773-4 chr2 27515276 27515633 + 0.489200556185773 NA intron (NM_080848, intron 1 of 13) CpG 307 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-8 chr9 71216162 71216657 + 0.489200556185773 NA intron (NM_009022, intron 1 of 13) CpG 620 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak1_49_33_0.27483602090197_5.22488085170132_0.489200556185773-5 chr5 130029007 130029819 + 0.489200556185773 NA intron (NM_007761, intron 1 of 5) CpG 107 NM_007761 12909 Mm.18072 NM_007761 ENSMUSG00000025532 Crcp AL022669 calcitonin gene-related peptide-receptor component protein protein-coding common_peak2_39_41_-0.349675459380331_5.2174796930886_0.489200556185773-3 chr16 59639204 59639836 + 0.489200556185773 NA promoter-TSS (NM_001347244) promoter-TSS (NM_001347244) -111 NM_001347244 56297 Mm.392505 NM_019665 ENSMUSG00000022722 Arl6 1110018H24Rik|2210411E14Rik|BBS3 ADP-ribosylation factor-like 6 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-4 chr5 20701735 20702081 + 0.489200556185773 NA intron (NM_001170746, intron 22 of 22) CpG 180216 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak1_49_33_0.27483602090197_5.22488085170132_0.489200556185773-6 chr8 117335346 117335705 + 0.489200556185773 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -13645 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_49_33_0.27483602090197_5.22488085170132_0.489200556185773 chr12 36156396 36157035 + 0.489200556185773 NA promoter-TSS (NM_146033) promoter-TSS (NM_146033) 110 NM_025840 66912 Mm.288669 NM_025840 ENSMUSG00000020547 Bzw2 1110001I24Rik|Bdm2|HSPC028 basic leucine zipper and W2 domains 2 protein-coding common_peak2_49_33_0.27483602090197_5.22488085170132_0.489200556185773-3 chr18 35191617 35192115 + 0.489200556185773 NA intron (NM_009818, intron 7 of 17) intron (NM_009818, intron 7 of 17) 23158 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-6 chr3 159030491 159030724 + 0.489164546851866 NA Intergenic Intergenic -45757 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-3 chr11 80183856 80184122 + 0.489164546851866 NA exon (NM_028019, exon 1 of 5) exon (NM_028019, exon 1 of 5) 117 NM_028019 71956 Mm.22985 NM_028019 ENSMUSG00000020707 Rnf135 0610037N03Rik|2410006N06Rik ring finger protein 135 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-5 chr16 11007847 11008260 + 0.489164546851866 NA promoter-TSS (NR_040518) promoter-TSS (NR_040518) -845 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-16 chr19 16959347 16959547 + 0.489164546851866 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 3329 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866 chr1 172499283 172499529 + 0.489164546851866 NA promoter-TSS (NM_178598) promoter-TSS (NM_178598) -840 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-27 chr9 14200585 14200833 + 0.489164546851866 NA Intergenic Intergenic -75592 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-22 chr9 54733314 54733552 + 0.489164546851866 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 1116 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-11 chr3 87072930 87073146 + 0.489164546851866 NA Intergenic Intergenic -73698 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-8 chr13 21974602 21974893 + 0.489164546851866 NA Intergenic Intergenic -6434 NM_001162928 195236 Mm.204664 NM_001162928 ENSMUSG00000016982 Pom121l2 Gm24 POM121 membrane glycoprotein-like 2 (rat) protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-17 chr5 92816103 92816629 + 0.489164546851866 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 6984 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-3 chr10 80156449 80156704 + 0.489164546851866 NA exon (NM_021565, exon 9 of 9) exon (NM_021565, exon 9 of 9) 6894 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-14 chr17 72976126 72976490 + 0.489164546851866 NA Intergenic Intergenic 58003 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-6 chr4 139226643 139226888 + 0.489164546851866 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 32654 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-10 chr4 45509450 45509882 + 0.489164546851866 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 21162 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-19 chr8 124959266 124959467 + 0.489164546851866 NA Intergenic Intergenic -10112 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-7 chr15 41711668 41711895 + 0.489164546851866 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -77214 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-11 chr14 66103681 66103875 + 0.489164546851866 NA exon (NM_001271403, exon 5 of 18) exon (NM_001271403, exon 5 of 18) 6882 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-13 chr9 57130246 57130452 + 0.489164546851866 NA promoter-TSS (NM_028636) promoter-TSS (NM_028636) -428 NM_028636 73744 Mm.30110 NM_028636 ENSMUSG00000032295 Man2c1 1110025H24Rik mannosidase, alpha, class 2C, member 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-5 chr11 35963925 35964171 + 0.489164546851866 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 16041 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-21 chr6 121166448 121166699 + 0.489164546851866 NA Intergenic Intergenic -17094 NR_130903 74043 Mm.491240 NM_028730 ENSMUSG00000067825 Pex26 4632428M11Rik peroxisomal biogenesis factor 26 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-9 chr14 51632679 51632990 + 0.489164546851866 NA intron (NM_001013816, intron 1 of 4) intron (NM_001013816, intron 1 of 4) 80044 NM_001013816 434459 Mm.359230 NM_001013816 ENSMUSG00000079244 Gm5622 EG434459 predicted gene 5622 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-13 chr16 26444553 26444836 + 0.489164546851866 NA Intergenic Intergenic -18441 NM_053241 114141 Mm.275205 NM_053241 ENSMUSG00000038148 Cldn16 PCLN1|claudin-16 claudin 16 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866 chr1 9637263 9637508 + 0.489164546851866 NA Intergenic Intergenic -6293 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-10 chr2 168104516 168104770 + 0.489164546851866 NA Intergenic Intergenic 23639 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-14 chr5 64201412 64201630 + 0.489164546851866 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -28836 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-12 chr4 59239674 59239961 + 0.489164546851866 NA Intergenic Intergenic -20234 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866 chr10 68275773 68275989 + 0.489164546851866 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 2845 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-20 chr8 36166170 36166425 + 0.489164546851866 NA Intergenic Intergenic 10287 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-15 chr7 67619431 67619862 + 0.489164546851866 NA intron (NR_028144, intron 2 of 8) intron (NR_028144, intron 2 of 8) 25590 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-19 chr7 130979895 130980156 + 0.489164546851866 NA intron (NM_019564, intron 5 of 8) intron (NM_019564, intron 5 of 8) 43822 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-14 chr3 79984157 79984485 + 0.489164546851866 NA Intergenic Intergenic 98391 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-24 chr8 124081333 124081555 + 0.489164546851866 NA Intergenic Intergenic 57971 NM_001029876 382038 Mm.334891 NM_001029876 ENSMUSG00000031976 Urb2 C77575|mKIAA0133 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-10 chr17 87376564 87377035 + 0.489164546851866 NA intron (NM_028639, intron 19 of 19) intron (NM_028639, intron 19 of 19) 50942 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-19 chr4 53631824 53632093 + 0.489164546851866 NA intron (NM_001355377, intron 1 of 12) CpG 487 NM_001195284 319636 Mm.103464 NM_176966 ENSMUSG00000054752 Fsd1l A230072O16Rik|Ccdc10|Csdufd1|Fsd1nl fibronectin type III and SPRY domain containing 1-like protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-2 chr12 113012295 113012515 + 0.489164546851866 NA Intergenic Intergenic -2103 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-15 chr7 37565556 37565990 + 0.489164546851866 NA intron (NM_172385, intron 4 of 5) intron (NM_172385, intron 4 of 5) 203979 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-3 chr12 86799207 86799509 + 0.489164546851866 NA Intergenic Intergenic 64989 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-2 chr10 52382990 52383210 + 0.489164546851866 NA promoter-TSS (NM_001199272) promoter-TSS (NM_001199272) -976 NM_001199272 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866 chr1 72070035 72070477 + 0.489164546851866 NA Intergenic MLT2B2|LTR|ERVL -65061 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-2 chr11 48822545 48822770 + 0.489164546851866 NA Intergenic Intergenic -3481 NM_053166 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-17 chr4 150373110 150373387 + 0.489164546851866 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 91332 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-5 chr15 39077796 39078146 + 0.489164546851866 NA intron (NM_026778, intron 1 of 3) intron (NM_026778, intron 1 of 3) 1039 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-10 chr15 81249000 81249218 + 0.489164546851866 NA intron (NR_077230, intron 1 of 1) intron (NR_077230, intron 1 of 1) -1138 NR_077231 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-4 chr15 78449374 78449587 + 0.489164546851866 NA intron (NM_001355601, intron 10 of 17) intron (NM_001355601, intron 10 of 17) 19154 NM_001355601 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-5 chr3 57252824 57253140 + 0.489164546851866 NA Intergenic Intergenic 49006 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-17 chr7 67742075 67742276 + 0.489164546851866 NA intron (NM_207663, intron 2 of 4) intron (NM_207663, intron 2 of 4) 17567 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-5 chr11 98588345 98588643 + 0.489164546851866 NA Intergenic Intergenic -1249 NM_025661 66612 Mm.180546 NM_025661 ENSMUSG00000038150 Ormdl3 2810011N17Rik|AI315223 ORM1-like 3 (S. cerevisiae) protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-21 chr5 122849375 122849756 + 0.489164546851866 NA promoter-TSS (NM_030564) promoter-TSS (NM_030564) -623 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-5 chr14 69487784 69488195 + 0.489164546851866 NA Intergenic Intergenic 24560 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-8 chr9 31204170 31204598 + 0.489164546851866 NA intron (NM_001357698, intron 1 of 17) PB1D10|SINE|Alu 7464 NM_001357698 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2|CDEBP amyloid beta (A4) precursor-like protein 2 protein-coding unique_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-3 chr17 21536181 21536588 + 0.489164546851866 NA promoter-TSS (NR_131123) promoter-TSS (NR_131123) -506 NR_131123 319870 Mm.488274 NR_131123 ENSMUSG00000097781 9330136K24Rik - RIKEN cDNA 9330136K24 gene ncRNA unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-18 chr5 137050952 137051176 + 0.489164546851866 NA Intergenic Intergenic -4956 NM_007457 11769 Mm.833 NM_007457 ENSMUSG00000004849 Ap1s1 AP19 adaptor protein complex AP-1, sigma 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-14 chr18 35833471 35833663 + 0.489164546851866 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 3253 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-10 chr17 35796410 35796695 + 0.489164546851866 NA Intergenic Intergenic 24102 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-12 chr9 32628713 32628984 + 0.489164546851866 NA Intergenic Intergenic -67194 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-6 chr11 117264314 117264569 + 0.489164546851866 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -1805 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-2 chr8 111336990 111337189 + 0.489164546851866 NA intron (NM_001310613, intron 1 of 10) intron (NM_001310613, intron 1 of 10) 1116 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-4 chr18 68127899 68128131 + 0.489164546851866 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -99931 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866 chr11 102156040 102156254 + 0.489164546851866 NA intron (NM_029649, intron 1 of 3) intron (NM_029649, intron 1 of 3) 260 NM_029649 76547 Mm.46529 NM_029649 ENSMUSG00000020921 Tmem101 2610511E22Rik transmembrane protein 101 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-16 chr3 21905587 21905976 + 0.489164546851866 NA Intergenic Intergenic -170871 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-9 chr2 167632668 167632998 + 0.489164546851866 NA promoter-TSS (NM_001311131) promoter-TSS (NM_001311131) -828 NM_023230 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-18 chr2 94158482 94158696 + 0.489164546851866 NA promoter-TSS (NM_019657) promoter-TSS (NM_019657) -680 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-17 chr8 24485408 24485714 + 0.489164546851866 NA promoter-TSS (NR_035483).2 promoter-TSS (NR_035483).2 -575 NR_035483 unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-7 chr17 31314138 31314530 + 0.489164546851866 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 18110 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-5 chr17 3350178 3350453 + 0.489164546851866 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) 23742 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-3 chr13 49681633 49681962 + 0.489164546851866 NA promoter-TSS (NM_172015) promoter-TSS (NM_172015) -333 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-4 chr11 88535012 88535375 + 0.489164546851866 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -84058 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-20 chr5 92773838 92774190 + 0.489164546851866 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 14548 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-6 chr17 14173094 14173397 + 0.489164546851866 NA Intergenic Intergenic 30586 NM_172826 240025 Mm.79993 NM_172826 ENSMUSG00000048826 Dact2 2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2 dishevelled-binding antagonist of beta-catenin 2 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-19 chr6 90508704 90509065 + 0.489164546851866 NA Intergenic Intergenic -41909 NM_001356412 107747 Mm.30035 NM_027406 ENSMUSG00000030088 Aldh1l1 1810048F20Rik|FDH|Fthfd|Neut2 aldehyde dehydrogenase 1 family, member L1 protein-coding common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-9 chrX 75416146 75416450 + 0.489164546851866 NA promoter-TSS (NM_001166457) promoter-TSS (NM_001166457) 286 NM_010839 105886298 Mm.16366 NM_010839 ENSMUSG00000090110 Cmc4 Mtcp1nb|p8MTCP1 C-x(9)-C motif containing 4 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-4 chr14 25470652 25471001 + 0.489164546851866 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 11641 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-2 chr1 184845466 184845697 + 0.489164546851866 NA exon (NM_133684, exon 1 of 8) exon (NM_133684, exon 1 of 8) 266 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-13 chr2 32960752 32961196 + 0.489164546851866 NA promoter-TSS (NM_009076) promoter-TSS (NM_009076) 281 NM_199302 227738 Mm.248037 NM_199302 ENSMUSG00000026792 Lrsam1 - leucine rich repeat and sterile alpha motif containing 1 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-19 chr9 49927521 49927816 + 0.489164546851866 NA Intergenic Intergenic -128275 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-16 chr5 72868594 72868803 + 0.489164546851866 NA promoter-TSS (NM_001113460) promoter-TSS (NM_001113460) -250 NM_001113460 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-4 chr2 166398593 166398978 + 0.489164546851866 NA Intergenic Intergenic -48666 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-14 chr2 181693536 181693861 + 0.489164546851866 NA 5' UTR (NM_001291208, exon 1 of 5) 5' UTR (NM_001291208, exon 1 of 5) 112 NM_001291206 56470 Mm.274366 NM_026446 ENSMUSG00000002458 Rgs19 2610042F04Rik|AI324841|AW547781|GAIP regulator of G-protein signaling 19 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-5 chr11 103266230 103266440 + 0.489164546851866 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 1066 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-7 chr12 85496734 85496978 + 0.489164546851866 NA Intergenic Intergenic 22966 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-18 chr4 32280476 32280705 + 0.489164546851866 NA Intergenic Intergenic -136845 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-8 chr17 35777031 35777360 + 0.489164546851866 NA non-coding (NR_045459, exon 2 of 3) non-coding (NR_045459, exon 2 of 3) 4745 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-22 chr9 108280179 108280410 + 0.489164546851866 NA Intergenic Intergenic -10163 NM_025449 66257 Mm.10407 NM_025449 ENSMUSG00000032606 Nicn1 1500032A17Rik nicolin 1 protein-coding unique_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-5 chr6 42396914 42397162 + 0.489164546851866 NA Intergenic Intergenic -3200 NM_001001452 387514 Mm.377921 NM_001001452 ENSMUSG00000046652 Tas2r143 Gm1404|Tas2r43|mt2r36 taste receptor, type 2, member 143 protein-coding common_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-3 chr15 84681633 84681867 + 0.489164546851866 NA intron (NM_146061, intron 1 of 7) intron (NM_146061, intron 1 of 7) 752 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-3 chr16 36072418 36072653 + 0.489164546851866 NA intron (NM_001159421, intron 1 of 3) intron (NM_001159421, intron 1 of 3) 875 NM_001159421 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-2 chr1 71938974 71939213 + 0.489164546851866 NA Intergenic Intergenic 50981 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-19 chr4 123622275 123622476 + 0.489164546851866 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) 5955 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866 chr10 4123829 4124084 + 0.489164546851866 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 89164 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-7 chr9 25152178 25152428 + 0.489164546851866 NA promoter-TSS (NM_020586) promoter-TSS (NM_020586) -522 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding unique_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866 chr1 40449529 40449861 + 0.489164546851866 NA intron (NM_001025602, intron 8 of 10) intron (NM_001025602, intron 8 of 10) 10066 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-17 chr3 144099137 144099522 + 0.489164546851866 NA Intergenic Intergenic 103003 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-13 chr3 58372862 58373136 + 0.489164546851866 NA Intergenic Intergenic -41721 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-9 chr13 32801251 32801674 + 0.489164546851866 NA promoter-TSS (NM_030215) promoter-TSS (NM_030215) -568 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-16 chr7 84504906 84505216 + 0.489164546851866 NA Intergenic Intergenic -23893 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-3 chr1 161436302 161436580 + 0.489164546851866 NA Intergenic Intergenic 41003 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-4 chr12 110533079 110533336 + 0.489164546851866 NA intron (NM_001081457, intron 2 of 12) intron (NM_001081457, intron 2 of 12) 47468 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-5 chr13 104462048 104462388 + 0.489164546851866 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 174383 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-11 chr19 6232678 6233052 + 0.489164546851866 NA exon (NM_198168, exon 4 of 14) exon (NM_198168, exon 4 of 14) 2975 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-8 chr15 102233785 102234020 + 0.489164546851866 NA Intergenic Intergenic -1967 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-11 chr16 14029234 14029526 + 0.489164546851866 NA intron (NM_144518, intron 1 of 5) intron (NM_144518, intron 1 of 5) -42513 NM_001270718 74482 Mm.484026 NM_028968 ENSMUSG00000065968 Ifitm7 4933438K12Rik|Mil4 interferon induced transmembrane protein 7 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-13 chr17 45945515 45945763 + 0.489164546851866 NA Intergenic Intergenic -64187 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-22 chr8 95167509 95167862 + 0.489164546851866 NA Intergenic ORSL|DNA|hAT-Tip100 -25145 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-7 chr16 23985491 23985783 + 0.489164546851866 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) 3215 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-21 chr9 25175437 25175886 + 0.489164546851866 NA Intergenic Intergenic -23880 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-8 chr17 72947822 72948201 + 0.489164546851866 NA Intergenic Intergenic 29706 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-8 chr2 30257726 30257950 + 0.489164546851866 NA intron (NM_177725, intron 3 of 3) intron (NM_177725, intron 3 of 3) -8365 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-25 chr8 25496629 25496958 + 0.489164546851866 NA Intergenic Intergenic -21966 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-2 chr11 88549696 88550065 + 0.489164546851866 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -69371 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-14 chr6 97212293 97212715 + 0.489164546851866 NA intron (NM_022992, intron 1 of 2) B1_Mur3|SINE|Alu 1712 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-7 chr17 6079159 6079576 + 0.489164546851866 NA promoter-TSS (NM_181392) promoter-TSS (NM_181392) 372 NM_001111017 321007 Mm.5548 NM_177311 ENSMUSG00000015659 Serac1 4930511N22Rik|D17Ertd141e serine active site containing 1 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-16 chr3 96058141 96058439 + 0.489164546851866 NA 5' UTR (NM_013841, exon 1 of 15) 5' UTR (NM_013841, exon 1 of 15) 165 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-8 chr13 104542376 104542698 + 0.489164546851866 NA Intergenic Intergenic 254702 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-25 chr9 44396512 44396767 + 0.489164546851866 NA promoter-TSS (NM_001293630) promoter-TSS (NM_001293630) -288 NM_001293631 14385 Mm.30087 NM_008063 ENSMUSG00000032114 Slc37a4 100043178|G6PT|G6pt1|GSD-1b|mG6PT solute carrier family 37 (glucose-6-phosphate transporter), member 4 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-3 chr11 86629750 86630084 + 0.489164546851866 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) 41358 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-16 chr4 14826051 14826322 + 0.489164546851866 NA intron (NM_152812, intron 1 of 6) intron (NM_152812, intron 1 of 6) 401 NM_152812 72201 Mm.387724 NM_152812 ENSMUSG00000040550 Otud6b 2600013N14Rik|AU015433 OTU domain containing 6B protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-9 chr3 133091125 133091436 + 0.489164546851866 NA promoter-TSS (NM_027927) promoter-TSS (NM_027927) 545 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-9 chr16 34559870 34560240 + 0.489164546851866 NA Intergenic Intergenic -46028 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding unique_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866 chr11 57911470 57911822 + 0.489164546851866 NA Intergenic Intergenic -79499 NM_008213 15110 Mm.4746 NM_008213 ENSMUSG00000037335 Hand1 Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND heart and neural crest derivatives expressed 1 protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-5 chr14 8332652 8332889 + 0.489164546851866 NA Intergenic Intergenic -15163 NM_001360339 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-6 chr16 87552829 87553057 + 0.489164546851866 NA promoter-TSS (NM_144854) promoter-TSS (NM_144854) -387 NM_144854 224419 Mm.194466 NM_144854 ENSMUSG00000025610 Map3k7cl C21orf7|ORF63|Tak1l Map3k7 C-terminal like protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-15 chr3 66216152 66216488 + 0.489164546851866 NA intron (NM_145820, intron 4 of 13) intron (NM_145820, intron 4 of 13) -3567 NM_008987 19288 Mm.276776 NM_008987 ENSMUSG00000027832 Ptx3 AI607804|TSG-14 pentraxin related gene protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-9 chr3 121904344 121904723 + 0.489164546851866 NA Intergenic Intergenic -48696 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-2 chr1 151677087 151677355 + 0.489164546851866 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) 77506 NR_151474 102640772 NR_151473 ENSMUSG00000100594 2810414N06Rik - RIKEN cDNA 2810414N06 gene ncRNA common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-6 chr15 43650670 43650909 + 0.489164546851866 NA Intergenic Intergenic 173560 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-9 chr17 84368326 84368558 + 0.489164546851866 NA intron (NM_183021, intron 26 of 37) intron (NM_183021, intron 26 of 37) 97766 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-22 chr5 135724718 135725019 + 0.489164546851866 NA intron (NM_008898, intron 2 of 15) intron (NM_008898, intron 2 of 15) 11021 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-5 chr11 59662090 59662314 + 0.489164546851866 NA promoter-TSS (NM_012027) promoter-TSS (NM_012027) -293 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-8 chr3 53016770 53016974 + 0.489164546851866 NA intron (NM_026225, intron 1 of 18) CpG 351 NM_026225 67542 Mm.249548 NM_026225 ENSMUSG00000027742 Cog6 4933405E16Rik|AU018618|mKIAA1134 component of oligomeric golgi complex 6 protein-coding common_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-2 chr14 103346461 103346662 + 0.489164546851866 NA 5' UTR (NM_207215, exon 1 of 85) 5' UTR (NM_207215, exon 1 of 85) 239 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-11 chr17 45735272 45735561 + 0.489164546851866 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 910 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-17 chr2 67675179 67675530 + 0.489164546851866 NA promoter-TSS (NR_106083) promoter-TSS (NR_106083) -103 NR_106083 102465706 NR_106083 ENSMUSG00000098299 Mir7224 Gm27971|mmu-mir-7224 microRNA 7224 ncRNA common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-16 chr7 66581051 66581288 + 0.489164546851866 NA Intergenic Intergenic 108392 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-6 chr17 88038582 88038842 + 0.489164546851866 NA intron (NM_001081034, intron 1 of 22) intron (NM_001081034, intron 1 of 22) 26220 NM_001348248 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-24 chr7 79280783 79281061 + 0.489164546851866 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 7656 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-7 chr12 57196983 57197208 + 0.489164546851866 NA 5' UTR (NM_172577, exon 1 of 10) 5' UTR (NM_172577, exon 1 of 10) 377 NM_172577 217593 Mm.32835 NM_172577 ENSMUSG00000035472 Slc25a21 9930033G19Rik|A630030I10|BB158148 solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 protein-coding unique_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866 chr14 55721992 55722226 + 0.489164546851866 NA promoter-TSS (NM_019519) promoter-TSS (NM_019519) 93 NR_153435 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-23 chr9 57937742 57937965 + 0.489164546851866 NA Intergenic Intergenic -2282 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-15 chr3 20035038 20035279 + 0.489164546851866 NA exon (NM_001146324, exon 1 of 9) exon (NM_001146324, exon 1 of 9) 152 NM_001146324 12807 Mm.291533 NM_080634 ENSMUSG00000027615 Hps3 coa HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-2 chr13 17696119 17696474 + 0.489164546851866 NA intron (NM_025479, intron 1 of 1) intron (NM_025479, intron 1 of 1) 883 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-9 chr14 7812270 7812723 + 0.489164546851866 NA Intergenic Intergenic -5461 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-12 chr19 38031477 38031681 + 0.489164546851866 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 11998 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-5 chr3 152189056 152189316 + 0.489164546851866 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 4659 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-6 chr15 95367112 95367343 + 0.489164546851866 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 160787 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-9 chr19 4207393 4207650 + 0.489164546851866 NA Intergenic MIR|SINE|MIR -5918 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding unique_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-2 chr11 76797706 76797988 + 0.489164546851866 NA exon (NM_007754, exon 12 of 21) exon (NM_007754, exon 12 of 21) -34269 NM_001356321 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-4 chr11 4096946 4097134 + 0.489164546851866 NA TTS (NM_144520) TTS (NM_144520) -1609 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-11 chr3 21495460 21495796 + 0.489164546851866 NA Intergenic Intergenic -581024 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-20 chr6 120800154 120800444 + 0.489164546851866 NA intron (NM_007510, intron 7 of 8) intron (NM_007510, intron 7 of 8) 22399 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|Vma4|p31 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-8 chr13 73773742 73774214 + 0.489164546851866 NA intron (NM_001360694, intron 1 of 24) intron (NM_001360694, intron 1 of 24) 10281 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-18 chr8 70711380 70711646 + 0.489164546851866 NA Intergenic Intergenic -7030 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding unique_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-2 chr8 95154941 95155386 + 0.489164546851866 NA Intergenic Intergenic -12623 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-23 chr6 43666360 43666762 + 0.489164546851866 NA promoter-TSS (NM_001311111) promoter-TSS (NM_001311111) -283 NM_001311111 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-11 chr5 91617606 91617812 + 0.489164546851866 NA intron (NM_145562, intron 3 of 3) intron (NM_145562, intron 3 of 3) 100009 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-12 chr15 77836877 77837130 + 0.489164546851866 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 5172 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-13 chr19 44903892 44904223 + 0.489164546851866 NA Intergenic Intergenic -27062 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-6 chr13 13637363 13637689 + 0.489164546851866 NA exon (NM_010748, exon 6 of 53) exon (NM_010748, exon 6 of 53) 47117 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-13 chr5 29844694 29844958 + 0.489164546851866 NA Intergenic Intergenic -108890 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-9 chr9 45659920 45660137 + 0.489164546851866 NA intron (NM_001081270, intron 3 of 32) intron (NM_001081270, intron 3 of 32) 168610 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866 chr1 125677088 125677325 + 0.489164546851866 NA 5' UTR (NM_027677, exon 1 of 2) 5' UTR (NM_027677, exon 1 of 2) 210 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-14 chr6 108212018 108212282 + 0.489164546851866 NA promoter-TSS (NM_010585) promoter-TSS (NM_010585) -946 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-11 chr2 128133798 128134087 + 0.489164546851866 NA intron (NM_207681, intron 3 of 4) intron (NM_207681, intron 3 of 4) 6367 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-2 chr12 110204929 110205367 + 0.489164546851866 NA Intergenic Intergenic -47075 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-4 chr17 46681538 46681773 + 0.489164546851866 NA promoter-TSS (NM_027910) promoter-TSS (NM_027910) 475 NM_001277312 17256 Mm.329083 NM_010787 ENSMUSG00000002768 Mea1 Mea-1 male enhanced antigen 1 protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-3 chr10 77621796 77622129 + 0.489164546851866 NA promoter-TSS (NM_019803) promoter-TSS (NM_019803) -359 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-4 chr13 75740056 75740395 + 0.489164546851866 NA intron (NM_138953, intron 2 of 11) intron (NM_138953, intron 2 of 11) 32741 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-8 chr6 57535914 57536187 + 0.489164546851866 NA promoter-TSS (NM_175523) promoter-TSS (NM_175523) -624 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-12 chr5 114370913 114371118 + 0.489164546851866 NA intron (NM_001159941, intron 2 of 6) intron (NM_001159941, intron 2 of 6) 9490 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-12 chr3 49093989 49094227 + 0.489164546851866 NA Intergenic Intergenic -485008 NR_003617 66332 Mm.46124 NM_025493 1700018B24Rik - enhancer of rudimentary homolog pseudogene pseudo unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-14 chr2 61309541 61310076 + 0.489164546851866 NA Intergenic Intergenic -268778 NM_011529 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-15 chr6 20038161 20038524 + 0.489164546851866 NA Intergenic Intergenic 483000 NR_105789 102465192 NR_105789 ENSMUSG00000099149 Mir6370 Gm27480|mmu-mir-6370 microRNA 6370 ncRNA common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-6 chr3 41284390 41284749 + 0.489164546851866 NA Intergenic B3|SINE|B2 -201523 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-15 chr3 122010699 122010901 + 0.489164546851866 NA intron (NM_001356524, intron 20 of 22) intron (NM_001356524, intron 20 of 22) -33660 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-18 chr8 35668187 35668434 + 0.489164546851866 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -79290 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-10 chr19 4922991 4923221 + 0.489164546851866 NA exon (NM_133803, exon 4 of 18) exon (NM_133803, exon 4 of 18) 4864 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-4 chr13 5871080 5871420 + 0.489164546851866 NA TTS (NM_011803) TTS (NM_011803) 9761 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866 chr1 16218222 16218576 + 0.489164546851866 NA Intergenic Intergenic 112517 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-13 chr5 24452143 24452476 + 0.489164546851866 NA exon (NM_139153, exon 1 of 18) exon (NM_139153, exon 1 of 18) 132 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-20 chr4 102571999 102572303 + 0.489164546851866 NA intron (NM_019840, intron 6 of 14) intron (NM_019840, intron 6 of 14) 2091 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-12 chr16 38549897 38550129 + 0.489164546851866 NA intron (NM_001300827, intron 1 of 10) CpG 243 NR_153380 224143 Mm.284366 NM_172380 ENSMUSG00000034064 Poglut1 9630046K23Rik|Clp46|Ktelc1|Rumi|wsnp protein O-glucosyltransferase 1 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-10 chr15 66730491 66730765 + 0.489164546851866 NA intron (NM_009375, intron 27 of 47) intron (NM_009375, intron 27 of 47) 59858 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-11 chr8 36025494 36025723 + 0.489164546851866 NA Intergenic Intergenic -69220 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-7 chr2 29826629 29826846 + 0.489164546851866 NA promoter-TSS (NM_026615) promoter-TSS (NM_026615) -652 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-23 chr8 110830022 110830302 + 0.489164546851866 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 8436 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-15 chr18 66326645 66326961 + 0.489164546851866 NA Intergenic Intergenic -34965 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-7 chr12 76594129 76594386 + 0.489164546851866 NA intron (NM_013675, intron 32 of 35) intron (NM_013675, intron 32 of 35) -46332 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-13 chr6 94635696 94635920 + 0.489164546851866 NA intron (NM_001355269, intron 3 of 17) intron (NM_001355269, intron 3 of 17) -29393 NR_106008 102466992 NR_106008 ENSMUSG00000098531 Mir7041 Gm27872|mmu-mir-7041 microRNA 7041 ncRNA unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-8 chr2 125934279 125934616 + 0.489164546851866 NA intron (NM_175154, intron 7 of 9) intron (NM_175154, intron 7 of 9) 68224 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-17 chr3 84260197 84260427 + 0.489164546851866 NA promoter-TSS (NM_001271727) promoter-TSS (NM_001271727) -533 NM_001271727 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-4 chr11 94989605 94989851 + 0.489164546851866 NA Intergenic Intergenic -1484 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding unique_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-15 chr3 38887659 38888085 + 0.489164546851866 NA exon (NM_183221, exon 1 of 17) exon (NM_183221, exon 1 of 17) 932 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak1_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-2 chr1 183369247 183369456 + 0.489164546851866 NA intron (NM_177389, intron 1 of 26) CpG 214 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-26 chr8 95146445 95146676 + 0.489164546851866 NA Intergenic Intergenic -4020 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866 chr1 149861722 149862029 + 0.489164546851866 NA intron (NM_008869, intron 12 of 17) intron (NM_008869, intron 12 of 17) 60564 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-10 chr4 119123065 119123430 + 0.489164546851866 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 14502 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-10 chr14 25461858 25462094 + 0.489164546851866 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 2791 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-2 chr1 91459634 91459931 + 0.489164546851866 NA promoter-TSS (NM_011066) promoter-TSS (NM_011066) -454 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-26 chrX 8206088 8206375 + 0.489164546851866 NA intron (NM_145907, intron 1 of 13) intron (NM_145907, intron 1 of 13) 294 NM_145907 53627 Mm.443425 NM_016913 ENSMUSG00000031169 Porcn 2410004O13Rik|AW045557|DXHXS7465e|Mg61|Mporc|Ppn|mMg61|porc porcupine O-acyltransferase protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-3 chr11 16525456 16525835 + 0.489164546851866 NA Intergenic Intergenic -17161 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-2 chr12 16831665 16832092 + 0.489164546851866 NA Intergenic Intergenic 20913 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-10 chr9 114639701 114639925 + 0.489164546851866 NA intron (NM_153585, intron 1 of 19) intron (NM_153585, intron 1 of 19) 387 NM_153585 78893 Mm.283708 NM_153585 ENSMUSG00000056167 Cnot10 2600001P13Rik CCR4-NOT transcription complex, subunit 10 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-4 chr15 99402104 99402391 + 0.489164546851866 NA intron (NM_001171035, intron 3 of 9) intron (NM_001171035, intron 3 of 9) 9028 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-21 chr4 154964133 154964368 + 0.489164546851866 NA exon (NM_001305804, exon 1 of 20) exon (NM_001305804, exon 1 of 20) 127 NR_131230 269614 Mm.30042 NM_172990 ENSMUSG00000029056 Pank4 D030031I12Rik|R75150 pantothenate kinase 4 protein-coding unique_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-3 chr5 32458387 32458708 + 0.489164546851866 NA promoter-TSS (NM_172707) promoter-TSS (NM_172707) -423 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866 chr10 68355144 68355475 + 0.489164546851866 NA Intergenic A-rich|Low_complexity|Low_complexity -34167 NR_045357 75148 Mm.23505 NR_045357 ENSMUSG00000112157 4930545H06Rik - RIKEN cDNA 4930545H06 gene ncRNA unique_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-3 chr13 63431018 63431222 + 0.489164546851866 NA intron (NM_001347515, intron 1 of 15) intron (NM_001347515, intron 1 of 15) 625 NM_001347515 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-18 chr5 24394409 24394654 + 0.489164546851866 NA exon (NM_029020, exon 1 of 16) exon (NM_029020, exon 1 of 16) 375 NM_029020 74610 Mm.283914 NM_029020 ENSMUSG00000028973 Abcb8 4833412N02Rik|AA409895 ATP-binding cassette, sub-family B (MDR/TAP), member 8 protein-coding common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866 chr1 91490114 91490376 + 0.489164546851866 NA Intergenic Intergenic -4423 NM_028718 74019 Mm.318430 NM_028718 ENSMUSG00000034292 Traf3ip1 3930402D05Rik|AU041749|MIP-T3 TRAF3 interacting protein 1 protein-coding common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-4 chr10 81402727 81403012 + 0.489164546851866 NA intron (NM_026756, intron 8 of 8) intron (NM_026756, intron 8 of 8) -6706 NR_152732 102634174 Mm.392213 NR_152732 ENSMUSG00000085327 Gm16104 - predicted gene 16104 ncRNA common_peak2_19_12_0.349257224830582_3.87506833055638_0.489164546851866-7 chr18 12972910 12973131 + 0.489164546851866 NA intron (NM_008378, intron 1 of 10) intron (NM_008378, intron 1 of 10) 1097 NM_008378 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding unique_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866-12 chr17 72924634 72924874 + 0.489164546851866 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 6449 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_20_12_0.419149957451532_3.91001469686686_0.489164546851866-7 chr5 136136239 136136478 + 0.489164546851866 NA promoter-TSS (NM_027891) promoter-TSS (NM_027891) 23 NM_001359416 72041 Mm.294725 NM_028070 ENSMUSG00000039754 Alkbh4 2010004B12Rik|Abj4 alkB homolog 4, lysine demethylase protein-coding common_peak1_13_17_-0.631170928077143_3.85433953740374_0.489164546851866 chr13 15762309 15762693 + 0.489164546851866 NA Intergenic Intergenic 40129 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-6 chr11 113565444 113565674 + 0.489164546851866 NA intron (NM_027216, intron 1 of 9) intron (NM_027216, intron 1 of 9) 256 NM_001166503 69806 Mm.341021 NM_027216 ENSMUSG00000041654 Slc39a11 1810074D23Rik solute carrier family 39 (metal ion transporter), member 11 protein-coding common_peak1_20_12_0.419149957451532_3.91001469686686_0.489164546851866 chr1 9630184 9630567 + 0.489164546851866 NA intron (NR_015470, intron 1 of 4) intron (NR_015470, intron 1 of 4) 717 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA common_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-12 chr4 89386657 89386926 + 0.489164546851866 NA intron (NR_132431, intron 4 of 9) intron (NR_132431, intron 4 of 9) -75759 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak2_13_17_-0.631170928077143_3.85433953740374_0.489164546851866-6 chr11 107468563 107468885 + 0.489164546851866 NA intron (NR_153311, intron 1 of 9) intron (NR_153311, intron 1 of 9) 1996 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_19_12_0.349257224830582_3.87506833055638_0.489164546851866-24 chr9 120110453 120110646 + 0.489164546851866 NA exon (NM_144793, exon 1 of 7) exon (NM_144793, exon 1 of 7) 150 NM_144793 208638 Mm.236656 NM_144793 ENSMUSG00000032519 Slc25a38 AV019094|BC010801|appoptosin solute carrier family 25, member 38 protein-coding common_peak2_14_17_-0.532337476669939_3.90375626310734_0.489164546851866-3 chr12 76551358 76551605 + 0.489164546851866 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -3556 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_243_218_-0.141740949444785_7.70391658487878_0.489081074822677 chr10 80797701 80799488 + 0.489081074822677 NA promoter-TSS (NM_013651) promoter-TSS (NM_013651) 32 NM_023900 78670 Mm.41479 NM_023900 ENSMUSG00000035278 Plekhj1 9530063M10Rik pleckstrin homology domain containing, family J member 1 protein-coding common_peak1_190_140_0.142678832548223_7.21089076867291_0.488924577005941 chr10 4105577 4107926 + 0.488924577005941 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 106369 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-3 chr5 72854976 72855723 + 0.488458446780741 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 13099 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_63_63_-0.284069914928692_5.85796504253565_0.488458446780741 chr13 29983614 29984331 + 0.488458446780741 NA intron (NM_010093, intron 1 of 6) CpG 419 NM_001289920 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak2_63_63_-0.284069914928692_5.85796504253565_0.488458446780741 chr13 113614942 113615891 + 0.488458446780741 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 3148 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-4 chr5 120612049 120612915 + 0.488458446780741 NA promoter-TSS (NM_028041) promoter-TSS (NM_028041) 107 NM_029096 100764 Mm.9654 NM_029096 ENSMUSG00000029600 Rita1 1110008J03Rik|AI853657|C86297|Rita RBPJ interacting and tubulin associated 1 protein-coding common_peak1_63_63_-0.284069914928692_5.85796504253565_0.488458446780741-2 chr15 53618565 53619447 + 0.488458446780741 NA intron (NM_177225, intron 4 of 4) (GAA)n|Simple_repeat|Simple_repeat -4727 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-4 chr7 129591936 129592471 + 0.488458446780741 NA intron (NM_172255, intron 1 of 28) intron (NM_172255, intron 1 of 28) 340 NM_172255 207425 Mm.229323 NM_172255 ENSMUSG00000042055 Wdr11 2900055P10Rik|AW489876|Brwd2|mKIAA1351 WD repeat domain 11 protein-coding common_peak1_63_63_-0.284069914928692_5.85796504253565_0.488458446780741-3 chr6 128300618 128301336 + 0.488458446780741 NA promoter-TSS (NM_011567) promoter-TSS (NM_011567) -164 NM_011567 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding common_peak2_63_63_-0.284069914928692_5.85796504253565_0.488458446780741-2 chr8 95887655 95888376 + 0.488458446780741 NA intron (NM_010325, intron 1 of 9) intron (NM_010325, intron 1 of 9) 350 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding common_peak1_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-5 chr5 125405902 125406849 + 0.488458446780741 NA Intergenic Intergenic -16358 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-2 chr11 19019744 19020251 + 0.488458446780741 NA Intergenic CpG -1028 NM_010789 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak2_64_63_-0.261859906364252_5.86907004681787_0.488458446780741 chr1 138963491 138964332 + 0.488458446780741 NA intron (NM_001166501, intron 1 of 21) CpG 202 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding common_peak2_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-3 chr11 30267281 30268112 + 0.488458446780741 NA Intergenic CpG -47924 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak1_76_53_0.225946950007721_5.86786097716733_0.488458446780741 chr5 111246860 111247610 + 0.488458446780741 NA intron (NM_001267622, intron 12 of 22) intron (NM_001267622, intron 12 of 22) -83462 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_64_63_-0.261859906364252_5.86907004681787_0.488458446780741-2 chr11 31381381 31382089 + 0.488458446780741 NA Intergenic Intergenic -11674 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_64_63_-0.261859906364252_5.86907004681787_0.488458446780741 chr11 4276157 4277414 + 0.488458446780741 NA Intergenic Intergenic 9989 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_150_138_-0.173343168466468_7.03226948849027_0.488329079088269 chr11 82780406 82781910 + 0.488329079088269 NA promoter-TSS (NR_126067) promoter-TSS (NR_126067) 49 NM_010716 16882 Mm.277136 NM_010716 ENSMUSG00000020697 Lig3 D11Wsu78e ligase III, DNA, ATP-dependent protein-coding common_peak1_150_138_-0.173343168466468_7.03226948849027_0.488329079088269 chr4 33030323 33031949 + 0.488329079088269 NA promoter-TSS (NM_019586) promoter-TSS (NM_019586) 187 NR_036602 100504166 Mm.426309 NR_036602 ENSMUSG00000085037 4933421O10Rik - RIKEN cDNA 4933421O10 gene ncRNA common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-5 chr11 80538216 80538803 + 0.488172498216822 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -29403 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA unique_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-3 chr6 102119095 102119881 + 0.488172498216822 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -146612 NR_131018 75893 Mm.2968 NR_131017 ENSMUSG00000107563 4930587E11Rik 4930523E13Rik|Gm44188 RIKEN cDNA 4930587E11 gene ncRNA common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-4 chr2 108622248 108622812 + 0.488172498216822 NA Intergenic Intergenic 655760 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding unique_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-2 chr11 57090193 57090816 + 0.488172498216822 NA intron (NM_008165, intron 2 of 15) intron (NM_008165, intron 2 of 15) 77458 NM_001252403 14799 Mm.4920 NM_008165 ENSMUSG00000020524 Gria1 2900051M01Rik|Glr-1|Glr1|GluA1|GluR-A|GluRA|Glur-1|Glur1|HIPA1|gluR-K1 glutamate receptor, ionotropic, AMPA1 (alpha 1) protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-16 chr7 19076232 19076830 + 0.488172498216822 NA exon (NM_010058, exon 1 of 5) exon (NM_010058, exon 1 of 5) 331 NM_010058 13401 Mm.2852 NM_010058 ENSMUSG00000030410 Dmwd DMR-N9|Dm9 dystrophia myotonica-containing WD repeat motif protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-9 chr2 153433047 153433545 + 0.488172498216822 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 11183 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-5 chr5 25499220 25499480 + 0.488172498216822 NA promoter-TSS (NM_001081383) promoter-TSS (NM_001081383) -447 NR_030700 320965 Mm.32025 NR_030700 4831440E17Rik - RIKEN cDNA 4831440E17 gene ncRNA common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-11 chr5 93128075 93128684 + 0.488172498216822 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 34963 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-3 chr12 102416489 102417135 + 0.488172498216822 NA intron (NM_011175, intron 2 of 13) intron (NM_011175, intron 2 of 13) 23001 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-7 chr19 61140581 61140852 + 0.488172498216822 NA non-coding (NR_131953, exon 1 of 7) non-coding (NR_131953, exon 1 of 7) 124 NR_131956 414758 Mm.100056 NM_001001737 ENSMUSG00000074733 Zfp950 5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84 zinc finger protein 950 protein-coding common_peak2_38_25_0.305934058541477_4.85340674741183_0.488172498216822-3 chr7 16618241 16618610 + 0.488172498216822 NA intron (NR_136929, intron 1 of 2) B4A|SINE|B4 -3432 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822 chr1 16228077 16228337 + 0.488172498216822 NA TTS (NM_025303) TTS (NM_025303) 122325 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_38_25_0.305934058541477_4.85340674741183_0.488172498216822 chr11 120795965 120796376 + 0.488172498216822 NA 5' UTR (NM_026824, exon 1 of 14) 5' UTR (NM_026824, exon 1 of 14) 225 NM_026824 68730 Mm.180622 NM_026824 ENSMUSG00000025155 Dus1l 1110032N12Rik dihydrouridine synthase 1-like (S. cerevisiae) protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-17 chr9 32715842 32716503 + 0.488172498216822 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 20130 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-7 chr13 12650008 12650624 + 0.488172498216822 NA promoter-TSS (NR_003568) promoter-TSS (NR_003568) 79 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik G protein-coupled receptor 137B, pseudogene pseudo common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-2 chr10 82178285 82178865 + 0.488172498216822 NA Intergenic Intergenic 50562 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-4 chr13 69591617 69592266 + 0.488172498216822 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 19522 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-12 chr5 142797982 142798651 + 0.488172498216822 NA intron (NM_178242, intron 2 of 15) intron (NM_178242, intron 2 of 15) 19071 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822 chr1 183115351 183115917 + 0.488172498216822 NA intron (NM_001278218, intron 3 of 8) intron (NM_001278218, intron 3 of 8) 31923 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-4 chr11 54860912 54861342 + 0.488172498216822 NA promoter-TSS (NM_029327) promoter-TSS (NM_029327) -536 NM_029327 75530 Mm.83578 NM_029327 ENSMUSG00000020268 Lyrm7 1700024C24Rik|9330147L21Rik LYR motif containing 7 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-2 chr11 96968984 96969722 + 0.488172498216822 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 8335 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-7 chr9 47574625 47575113 + 0.488172498216822 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 44517 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-14 chr6 50389348 50390063 + 0.488172498216822 NA intron (NM_001163645, intron 2 of 21) B1F1|SINE|Alu -6868 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-15 chr6 108452129 108452492 + 0.488172498216822 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -37433 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-8 chr2 120404901 120405337 + 0.488172498216822 NA intron (NM_172672, intron 1 of 23) intron (NM_172672, intron 1 of 23) -1003 NM_001110496 211499 Mm.260712 NM_173734 ENSMUSG00000033808 Tmem87a A930025J12Rik transmembrane protein 87A protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-9 chr16 85165720 85166323 + 0.488172498216822 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 7686 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-10 chr4 48539855 48540311 + 0.488172498216822 NA promoter-TSS (NM_001145924) promoter-TSS (NM_001145924) 2 NM_001145924 66665 Mm.140749 NM_028137 ENSMUSG00000039693 Msantd3 2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3 Myb/SANT-like DNA-binding domain containing 3 protein-coding common_peak2_38_25_0.305934058541477_4.85340674741183_0.488172498216822-2 chr4 34550615 34550987 + 0.488172498216822 NA 5' UTR (NM_001007589, exon 1 of 5) 5' UTR (NM_001007589, exon 1 of 5) 186 NM_001007589 433693 Mm.389532 NM_026019 ENSMUSG00000028291 Akirin2 2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2 akirin 2 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-6 chr18 35045510 35046173 + 0.488172498216822 NA Intergenic Intergenic -73071 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-6 chr12 85605031 85605375 + 0.488172498216822 NA intron (NM_001205053, intron 1 of 3) intron (NM_001205053, intron 1 of 3) 5185 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-12 chr6 7844850 7845128 + 0.488172498216822 NA promoter-TSS (NM_052993) promoter-TSS (NM_052993) -235 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-10 chr4 133967437 133967961 + 0.488172498216822 NA intron (NM_016957, intron 1 of 5) CpG 292 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822 chr1 135534799 135535401 + 0.488172498216822 NA intron (NM_173437, intron 2 of 28) intron (NM_173437, intron 2 of 28) 50255 NM_173437 215690 Mm.34977 NM_173437 ENSMUSG00000009418 Nav1 9530089B19|9930003A20Rik|C230080M11Rik|Gm38399|Pomfil3|Unc53h1|mKIAA1151|steerin-1 neuron navigator 1 protein-coding common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-2 chr12 87299848 87300266 + 0.488172498216822 NA promoter-TSS (NM_001290302) promoter-TSS (NM_001290302) -352 NM_001290302 217738 Mm.219363 NM_001290302 ENSMUSG00000050671 Ism2 Gm264|Thsd3 isthmin 2 protein-coding common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-6 chr8 106193717 106194084 + 0.488172498216822 NA intron (NM_001357381, intron 6 of 9) intron (NM_001357381, intron 6 of 9) 17033 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak2_38_25_0.305934058541477_4.85340674741183_0.488172498216822-4 chr7 130965133 130965386 + 0.488172498216822 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 29056 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-3 chr11 16805907 16806354 + 0.488172498216822 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 53927 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822 chrX 150458931 150459504 + 0.488172498216822 NA promoter-TSS (NM_001164683) promoter-TSS (NM_001164683) -67 NR_152724 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak1_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-3 chr19 5841448 5841765 + 0.488172498216822 NA TTS (NR_003513) TTS (NR_003513) 3872 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-11 chr4 150853971 150854594 + 0.488172498216822 NA promoter-TSS (NM_133753) promoter-TSS (NM_133753) 486 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822-5 chr16 14317022 14317234 + 0.488172498216822 NA intron (NM_025345, intron 1 of 4) intron (NM_025345, intron 1 of 4) 204 NM_025345 66086 Mm.42072 NM_025345 ENSMUSG00000022677 Fopnl 0610037P05Rik Fgfr1op N-terminal like protein-coding unique_peak2_29_32_-0.413861574159324_4.83746333227879_0.488172498216822 chr1 43258164 43258860 + 0.488172498216822 NA Intergenic Intergenic -61751 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-8 chr16 37786553 37787251 + 0.488172498216822 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 9847 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak1_38_25_0.305934058541477_4.85340674741183_0.488172498216822-13 chr5 151316109 151316706 + 0.488172498216822 NA Intergenic Intergenic -52268 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-15 chr5 91282643 91283000 + 0.487794509777423 NA intron (NR_040428, intron 1 of 5) intron (NR_040428, intron 1 of 5) 255 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA unique_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423 chr15 71872403 71872818 + 0.487794509777423 NA intron (NM_027174, intron 40 of 63) intron (NM_027174, intron 40 of 63) -144772 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-2 chr11 61973820 61974094 + 0.487794509777423 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 17194 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423 chr1 43092679 43092885 + 0.487794509777423 NA promoter-TSS (NM_001357299) promoter-TSS (NM_001357299) -296 NM_001357299 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423 chr18 4920844 4921324 + 0.487794509777423 NA Intergenic CpG 108598 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 - predicted gene 10556 ncRNA common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-19 chr6 125039871 125040377 + 0.487794509777423 NA intron (NM_133345, intron 1 of 7) intron (NM_133345, intron 1 of 7) 276 NM_133345 28019 Mm.262547 NM_133345 ENSMUSG00000030330 Ing4 D6Wsu147e|D6Xrf92|p29ING4 inhibitor of growth family, member 4 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423 chr11 44949589 44950001 + 0.487794509777423 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 167133 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-7 chr2 173043234 173043691 + 0.487794509777423 NA Intergenic Intergenic 21560 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-6 chr18 80656387 80656702 + 0.487794509777423 NA intron (NM_198429, intron 6 of 9) intron (NM_198429, intron 6 of 9) 51629 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-7 chr18 53744263 53744565 + 0.487794509777423 NA intron (NM_178686, intron 1 of 20) CpG-6979 133 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-13 chr4 47311278 47311697 + 0.487794509777423 NA intron (NM_009928, intron 39 of 39) intron (NM_009928, intron 39 of 39) -41735 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-9 chr4 88515150 88515581 + 0.487794509777423 NA Intergenic MIRb|SINE|MIR 7429 NM_010510 15977 Mm.1245 NM_010510 ENSMUSG00000048806 Ifnb1 IFN-beta|IFNB|Ifb interferon beta 1, fibroblast protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-4 chr11 117824068 117824347 + 0.487794509777423 NA intron (NM_001271729, intron 2 of 5) intron (NM_001271729, intron 2 of 5) -1712 NM_027827 71562 Mm.273958 NM_027827 ENSMUSG00000017718 Afmid 9030621K19Rik|Ammd|FKF|KFA|Kf|formylase arylformamidase protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-9 chr9 59660813 59661334 + 0.487794509777423 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 4705 NM_011099 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-5 chr12 84187140 84187556 + 0.487794509777423 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 6667 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-17 chr6 67481875 67482210 + 0.487794509777423 NA intron (NM_144548, intron 3 of 10) intron (NM_144548, intron 3 of 10) 9813 NM_144548 209590 Mm.221227 NM_144548 ENSMUSG00000049093 Il23r IL-23R interleukin 23 receptor protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-2 chr11 117995470 117995860 + 0.487794509777423 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) -6605 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-6 chr3 86809910 86810349 + 0.487794509777423 NA intron (NM_001195500, intron 8 of 11) intron (NM_001195500, intron 8 of 11) 110755 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-8 chr18 80656386 80656695 + 0.487794509777423 NA intron (NM_198429, intron 6 of 9) intron (NM_198429, intron 6 of 9) 51633 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-12 chr9 102768903 102769206 + 0.487794509777423 NA Intergenic Intergenic 29406 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-3 chr12 8436975 8437460 + 0.487794509777423 NA Intergenic Intergenic 62792 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-5 chr17 70994501 70994956 + 0.487794509777423 NA exon (NM_001357820, exon 4 of 4) exon (NM_001357820, exon 4 of 4) 3284 NM_001357820 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-11 chr9 75542111 75542648 + 0.487794509777423 NA intron (NM_001357828, intron 1 of 10) intron (NM_001357828, intron 1 of 10) 17278 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-4 chr12 72490506 72490928 + 0.487794509777423 NA intron (NM_030070, intron 23 of 24) intron (NM_030070, intron 23 of 24) -45640 NM_026327 67708 Mm.11233 NM_026327 ENSMUSG00000034501 Pcnx4 1810048J11Rik|4932413O10|AU017192|Pcnxl4 pecanex homolog 4 protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-4 chr2 29619220 29619518 + 0.487794509777423 NA promoter-TSS (NM_001039087) promoter-TSS (NM_001039087) -351 NM_054050 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-10 chr7 64286997 64287437 + 0.487794509777423 NA promoter-TSS (NM_172742) promoter-TSS (NM_172742) -453 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-10 chr2 78868333 78868693 + 0.487794509777423 NA promoter-TSS (NM_009454) promoter-TSS (NM_009454) -534 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-6 chr17 80809929 80810189 + 0.487794509777423 NA Intergenic Intergenic -82034 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-14 chr5 35035367 35035759 + 0.487794509777423 NA Intergenic Intergenic -5946 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-3 chr2 27331149 27331613 + 0.487794509777423 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -84078 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-20 chr8 126844254 126844557 + 0.487794509777423 NA Intergenic Intergenic -4615 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-18 chr6 99523176 99523629 + 0.487794509777423 NA Intergenic Intergenic -2409 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-7 chr7 84333744 84334074 + 0.487794509777423 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 76129 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-2 chr2 25262943 25263360 + 0.487794509777423 NA exon (NM_175286, exon 1 of 4) exon (NM_175286, exon 1 of 4) 553 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-21 chr9 124280999 124281337 + 0.487794509777423 NA Intergenic Intergenic 31526 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-3 chr11 101784931 101785246 + 0.487794509777423 NA intron (NM_008815, intron 1 of 12) CpG-2651 222 NM_008815 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-8 chr7 112375217 112375491 + 0.487794509777423 NA intron (NM_027587, intron 1 of 9) intron (NM_027587, intron 1 of 9) 7046 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-12 chr4 16163152 16163465 + 0.487794509777423 NA promoter-TSS (NR_045765) promoter-TSS (NR_045765) 335 NM_138952 192656 Mm.112765 NM_138952 ENSMUSG00000041135 Ripk2 2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2 receptor (TNFRSF)-interacting serine-threonine kinase 2 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-9 chr2 28446548 28447250 + 0.487794509777423 NA Intergenic CpG -1042 NM_001005420 241289 Mm.330095 NM_001005420 ENSMUSG00000035829 Ppp1r26 Gm347|Kiaa0649|mKIAA0649 protein phosphatase 1, regulatory subunit 26 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-16 chr6 31102829 31103191 + 0.487794509777423 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -39917 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-5 chr3 55461915 55462328 + 0.487794509777423 NA intron (NM_001357476, intron 1 of 13) intron (NM_001357476, intron 1 of 13) 393 NM_001357476 13175 Mm.393242 NM_019978 ENSMUSG00000027797 Dclk1 1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369 doublecortin-like kinase 1 protein-coding common_peak1_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-8 chr4 32174473 32174820 + 0.487794509777423 NA Intergenic Intergenic 210539 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_21_24_-0.45762580760442_4.41504328597251_0.487794509777423-11 chr2 137731956 137732261 + 0.487794509777423 NA Intergenic Intergenic -524476 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-9 chr18 77953852 77954260 + 0.48779450977742 NA intron (NM_001195633, intron 3 of 43) intron (NM_001195633, intron 3 of 43) 15589 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-11 chr5 136136200 136136619 + 0.48779450977742 NA promoter-TSS (NM_027891) promoter-TSS (NM_027891) 74 NM_001359416 72041 Mm.294725 NM_028070 ENSMUSG00000039754 Alkbh4 2010004B12Rik|Abj4 alkB homolog 4, lysine demethylase protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-6 chr19 7310940 7311374 + 0.48779450977742 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -15710 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742-5 chr7 19272083 19272518 + 0.48779450977742 NA promoter-TSS (NM_001282021) promoter-TSS (NM_001282021) -446 NM_001282022 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742 chr14 51960006 51960282 + 0.48779450977742 NA Intergenic Intergenic -24689 NM_001145921 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-9 chr4 14864921 14865302 + 0.48779450977742 NA intron (NM_028264, intron 1 of 6) intron (NM_028264, intron 1 of 6) 892 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360|Pip4p2 transmembrane protein 55A protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-8 chr18 73815595 73816008 + 0.48779450977742 NA promoter-TSS (NM_145494) promoter-TSS (NM_145494) -409 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-12 chr8 33927731 33928143 + 0.48779450977742 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 1926 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-2 chr10 71130532 71131070 + 0.48779450977742 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 28889 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-11 chr8 3599758 3600212 + 0.48779450977742 NA intron (NM_001347113, intron 5 of 17) intron (NM_001347113, intron 5 of 17) 12535 NM_001347111 69697 Mm.390010 NM_027171 ENSMUSG00000044433 Camsap3 2310057J16Rik|Kiaa1543|Nezha calmodulin regulated spectrin-associated protein family, member 3 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-4 chr18 46526271 46526696 + 0.48779450977742 NA promoter-TSS (NM_173423) promoter-TSS (NM_173423) -512 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-6 chr11 102155944 102156293 + 0.48779450977742 NA intron (NM_029649, intron 1 of 3) intron (NM_029649, intron 1 of 3) 289 NM_029649 76547 Mm.46529 NM_029649 ENSMUSG00000020921 Tmem101 2610511E22Rik transmembrane protein 101 protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-13 chr9 70834384 70834717 + 0.48779450977742 NA intron (NM_001324473, intron 1 of 8) intron (NM_001324473, intron 1 of 8) 100258 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-7 chr2 158170048 158170552 + 0.48779450977742 NA Intergenic Intergenic -21708 NR_036606 73399 Mm.416861 NR_036606 ENSMUSG00000078957 1700060C20Rik - RIKEN cDNA 1700060C20 gene ncRNA common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742-2 chr15 27998841 27999063 + 0.48779450977742 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 26896 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-10 chr2 59882253 59882610 + 0.48779450977742 NA 5' UTR (NM_028118, exon 1 of 11) 5' UTR (NM_028118, exon 1 of 11) 175 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-4 chr11 72848075 72848354 + 0.48779450977742 NA intron (NM_001045536, intron 11 of 54) (CCAA)n|Simple_repeat|Simple_repeat 51988 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-13 chr8 106516833 106517037 + 0.48779450977742 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 6083 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-3 chr10 86099911 86100221 + 0.48779450977742 NA intron (NR_038024, intron 1 of 2) MIR3|SINE|MIR 4212 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-5 chr19 5052017 5052348 + 0.48779450977742 NA exon (NM_145495, exon 6 of 10) exon (NM_145495, exon 6 of 10) 1374 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-10 chr7 67954689 67955211 + 0.48779450977742 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 2693 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742-4 chr2 180582739 180583078 + 0.48779450977742 NA exon (NM_028479, exon 2 of 6) exon (NM_028479, exon 2 of 6) 1686 NR_151482 73247 Mm.426558 NM_028479 ENSMUSG00000027569 Mrgbp 1600027N09Rik|AW060503|C80444 MRG/MORF4L binding protein protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-7 chr13 59557032 59557286 + 0.48779450977742 NA promoter-TSS (NM_001284219) promoter-TSS (NM_001284219) 188 NM_001284218 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-8 chr3 122085299 122085664 + 0.48779450977742 NA intron (NM_007378, intron 8 of 49) intron (NM_007378, intron 8 of 49) 41021 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742-3 chr17 13668885 13669283 + 0.48779450977742 NA Intergenic Intergenic -91457 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742-7 chr8 119424130 119424387 + 0.48779450977742 NA Intergenic Intergenic -12904 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-2 chr13 23697745 23698170 + 0.48779450977742 NA TTS (NM_178208) TTS (NM_178208) 501 NM_178208 319155 Mm.261662 NM_178208 ENSMUSG00000060678 Hist1h4c - histone cluster 1, H4c protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-3 chr15 6237838 6238229 + 0.48779450977742 NA Intergenic Intergenic -61756 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742 chr1 45596252 45596802 + 0.48779450977742 NA Intergenic Intergenic -93245 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_28_18_0.334040487506925_4.41494775719705_0.48779450977742-6 chr8 18724721 18725180 + 0.48779450977742 NA intron (NM_007426, intron 1 of 8) intron (NM_007426, intron 1 of 8) 16612 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-5 chr11 101767642 101768047 + 0.48779450977742 NA TTS (NM_144831) TTS (NM_144831) 17466 NM_008815 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding unique_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742-12 chr8 86881746 86882057 + 0.48779450977742 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 3357 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_28_18_0.334040487506925_4.41494775719705_0.48779450977742 chr1 180331893 180332337 + 0.48779450977742 NA 5' UTR (NM_001081175, exon 2 of 8) 5' UTR (NM_001081175, exon 2 of 8) -1566 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_78_76_-0.249218874419625_6.14217710348509_0.487565695002494-2 chr4 46649522 46650815 + 0.487565695002494 NA promoter-TSS (NM_198664) promoter-TSS (NM_198664) 31 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding common_peak1_92_65_0.206891022421783_6.14783963056935_0.487565695002494 chr1 89122859 89124078 + 0.487565695002494 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 53053 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_78_76_-0.249218874419625_6.14217710348509_0.487565695002494 chr6 83136739 83137537 + 0.487565695002494 NA promoter-TSS (NM_009106) promoter-TSS (NM_009106) 54 NM_133641 20166 Mm.4139 NM_009106 ENSMUSG00000034930 Rtkn - rhotekin protein-coding common_peak1_78_76_-0.249218874419625_6.14217710348509_0.487565695002494 chr19 53412415 53412830 + 0.487565695002494 NA Intergenic Intergenic -21988 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_92_65_0.206891022421783_6.14783963056935_0.487565695002494 chrX 19165466 19166960 + 0.487565695002494 NA Intergenic Intergenic -19242 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak2_112_105_-0.197597752902947_6.62912157811173_0.487449105769037-2 chr7 128532419 128533569 + 0.487449105769037 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 9411 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_112_105_-0.197597752902947_6.62912157811173_0.487449105769037-3 chr8 70609692 70610154 + 0.487449105769037 NA Intergenic Intergenic -1609 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak2_127_92_0.169716294390033_6.62401695830305_0.487449105769037 chr4 43561679 43562916 + 0.487449105769037 NA promoter-TSS (NM_013497) promoter-TSS (NM_013497) 286 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_127_92_0.169716294390033_6.62401695830305_0.487449105769037 chr17 29090516 29091976 + 0.487449105769037 NA intron (NM_001111099, intron 1 of 2) intron (NM_001111099, intron 1 of 2) 267 NM_001111099 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak1_111_105_-0.210331319917763_6.62275479460432_0.487449105769037 chr12 111943284 111945027 + 0.487449105769037 NA intron (NR_029464, intron 1 of 2) intron (NR_029464, intron 1 of 2) 327 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak1_128_92_0.180864341755612_6.62959098198584_0.487449105769037 chr12 71831216 71832406 + 0.487449105769037 NA intron (NM_026102, intron 1 of 25) CpG 743 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_111_105_-0.210331319917763_6.62275479460432_0.487449105769037 chr15 86213869 86215046 + 0.487449105769037 NA promoter-TSS (NM_145476) promoter-TSS (NM_145476) -2 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_112_105_-0.197597752902947_6.62912157811173_0.487449105769037 chr11 109650875 109652193 + 0.487449105769037 NA intron (NM_001313976, intron 1 of 10) intron (NM_001313976, intron 1 of 10) 613 NM_001313976 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding common_peak2_216_160_0.134136731439051_7.39798524383414_0.487327311772241 chr19 8988600 8990066 + 0.487327311772241 NA promoter-TSS (NM_001286518) promoter-TSS (NM_001286518) 49 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_109_78_0.187996573600591_6.3977790349774_0.487314796664552-3 chr3 98375318 98376057 + 0.487314796664552 NA Intergenic Intergenic -6794 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_109_78_0.187996573600591_6.3977790349774_0.487314796664552 chr13 112464212 112465331 + 0.487314796664552 NA intron (NM_010560, intron 1 of 16) intron (NM_010560, intron 1 of 16) 701 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_109_78_0.187996573600591_6.3977790349774_0.487314796664552 chr14 76774329 76775502 + 0.487314796664552 NA Intergenic Intergenic 14784 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_94_90_-0.226029266472915_6.39478000696224_0.487314796664552 chr3 90292121 90292884 + 0.487314796664552 NA Intergenic Intergenic 22353 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak2_109_78_0.187996573600591_6.3977790349774_0.487314796664552-2 chr8 94214586 94215426 + 0.487314796664552 NA intron (NM_001357266, intron 1 of 21) CpG 442 NM_172410 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_109_78_0.187996573600591_6.3977790349774_0.487314796664552-2 chr17 56608569 56610264 + 0.487314796664552 NA intron (NM_153152, intron 1 of 3) intron (NM_153152, intron 1 of 3) 355 NM_153152 224904 Mm.34002 NM_153152 ENSMUSG00000049760 2410015M20Rik Mic13|QIL1|sr104 RIKEN cDNA 2410015M20 gene protein-coding common_peak2_94_90_-0.226029266472915_6.39478000696224_0.487314796664552-2 chr6 125191795 125192900 + 0.487314796664552 NA promoter-TSS (NM_146171) promoter-TSS (NM_146171) 147 NM_025595 66493 Mm.138749 NM_025595 ENSMUSG00000030335 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 protein-coding common_peak1_109_78_0.187996573600591_6.3977790349774_0.487314796664552-4 chr8 11635153 11635712 + 0.487314796664552 NA promoter-TSS (NR_030781) promoter-TSS (NR_030781) 304 NR_106097 102465714 NR_106097 ENSMUSG00000104958 Mir7238 mmu-mir-7238 microRNA 7238 ncRNA common_peak1_246_220_-0.137350933755455_7.7192270925137_0.487293145787359 chr9 124422608 124425138 + 0.487293145787359 NA promoter-TSS (NR_015516) promoter-TSS (NR_015516) 86 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak1_299_224_0.115243314016238_7.87140284822516_0.486682461219649 chr3 52268433 52270640 + 0.486682461219649 NA intron (NM_019739, intron 1 of 2) CpG 1199 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_62_43_0.233938679609537_5.57640095844207_0.486454540233427-6 chr9 102625265 102626115 + 0.486454540233427 NA promoter-TSS (NM_181394) promoter-TSS (NM_181394) 434 NM_001301689 28135 Mm.38910 NM_001081122 ENSMUSG00000032534 Cep63 4921501M07|AL450317.13gm1|AW107703|CD20R|D9Mgc41|D9Mgc48e|ET2 centrosomal protein 63 protein-coding common_peak2_62_43_0.233938679609537_5.57640095844207_0.486454540233427 chr15 85678084 85678671 + 0.486454540233427 NA Intergenic Intergenic -25396 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_62_43_0.233938679609537_5.57640095844207_0.486454540233427-2 chr5 72558957 72559595 + 0.486454540233427 NA intron (NR_153351, intron 1 of 21) CpG 369 NM_001359837 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding common_peak1_62_43_0.233938679609537_5.57640095844207_0.486454540233427-2 chr18 24603002 24603668 + 0.486454540233427 NA promoter-TSS (NM_021448) promoter-TSS (NM_021448) 482 NM_139143 106957 Mm.21688 NM_139143 ENSMUSG00000024270 Slc39a6 Ermelin|Zip6 solute carrier family 39 (metal ion transporter), member 6 protein-coding common_peak1_62_43_0.233938679609537_5.57640095844207_0.486454540233427-3 chr18 60679782 60680960 + 0.486454540233427 NA Intergenic Intergenic 16961 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_62_43_0.233938679609537_5.57640095844207_0.486454540233427-4 chr4 156192710 156193370 + 0.486454540233427 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 4448 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_62_43_0.233938679609537_5.57640095844207_0.486454540233427 chr15 8444758 8445314 + 0.486454540233427 NA promoter-TSS (NM_027707) promoter-TSS (NM_027707) -573 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak1_62_43_0.233938679609537_5.57640095844207_0.486454540233427-5 chr8 60746091 60747035 + 0.486454540233427 NA Intergenic Intergenic 91006 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_51_52_-0.30943725968133_5.57320182472253_0.486454540233415-4 chr8 77132483 77133378 + 0.486454540233415 NA intron (NM_001083906, intron 3 of 8) intron (NM_001083906, intron 3 of 8) 230422 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding common_peak1_51_52_-0.30943725968133_5.57320182472253_0.486454540233415-2 chr17 44500943 44501537 + 0.486454540233415 NA intron (NR_073425, intron 5 of 5) intron (NR_073425, intron 5 of 5) 234936 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_51_52_-0.30943725968133_5.57320182472253_0.486454540233415-3 chr7 100582686 100583181 + 0.486454540233415 NA intron (NR_003559, intron 1 of 7) CpG 197 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak2_51_52_-0.30943725968133_5.57320182472253_0.486454540233415-2 chr5 93262192 93263283 + 0.486454540233415 NA Intergenic Intergenic -4836 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_51_52_-0.30943725968133_5.57320182472253_0.486454540233415 chr12 111166377 111167010 + 0.486454540233415 NA intron (NM_001286122, intron 1 of 9) CpG 323 NM_011632 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_51_52_-0.30943725968133_5.57320182472253_0.486454540233415-3 chr7 132736496 132736962 + 0.486454540233415 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 40187 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_51_52_-0.30943725968133_5.57320182472253_0.486454540233415 chr11 3895298 3895714 + 0.486454540233415 NA promoter-TSS (NM_026150) promoter-TSS (NM_026150) 266 NM_173745 75219 Mm.32588 NM_173745 ENSMUSG00000047205 Dusp18 4930527G07Rik|AI430870|BB028064|DSP18|DUSP20|LMWDSP20 dual specificity phosphatase 18 protein-coding common_peak2_193_142_0.144684238059445_7.23221345580811_0.486416920152432 chr8 105860650 105861916 + 0.486416920152432 NA intron (NM_001357230, intron 1 of 4) intron (NM_001357230, intron 1 of 4) 408 NM_001357230 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding common_peak1_243_181_0.125251469957692_7.57042037517754_0.486245890442876 chr19 55253232 55255058 + 0.486245890442876 NA 5' UTR (NM_027976, exon 1 of 22) 5' UTR (NM_027976, exon 1 of 22) 776 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak1_149_108_0.167895160029593_6.85213190479172_0.4861916492431-2 chr2 155804586 155806602 + 0.4861916492431 NA intron (NM_010808, intron 4 of 8) intron (NM_010808, intron 4 of 8) 13609 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_149_108_0.167895160029593_6.85213190479172_0.4861916492431 chr9 64020401 64021447 + 0.4861916492431 NA exon (NM_008542, exon 1 of 4) exon (NM_008542, exon 1 of 4) 1135 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_149_108_0.167895160029593_6.85213190479172_0.4861916492431 chr1 151342560 151344330 + 0.4861916492431 NA Intergenic Intergenic -1041 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_276_245_-0.127754662023325_7.87863717432758_0.485891972314988 chr11 53350290 53352369 + 0.485891972314988 NA intron (NM_033565, intron 1 of 20) intron (NM_033565, intron 1 of 20) 562 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak2_113_106_-0.19852290920179_6.64220553180025_0.485572860846279 chr17 26583240 26584525 + 0.485572860846279 NA intron (NM_026170, intron 1 of 9) MIRb|SINE|MIR 22370 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_113_106_-0.19852290920179_6.64220553180025_0.485572860846279-2 chr5 100415325 100416826 + 0.485572860846279 NA intron (NM_001359344, intron 1 of 26) CpG 159 NM_001359323 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak1_222_200_-0.146927018194711_7.57758818208157_0.485275453111844 chr8 122230275 122231823 + 0.485275453111844 NA Intergenic Intergenic -51092 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_77_54_0.217959083584664_5.89033925531699_0.485273987300002 chr11 75531077 75532414 + 0.485273987300002 NA promoter-TSS (NM_173388) promoter-TSS (NM_173388) 51 NM_173388 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak2_65_64_-0.26235680820394_5.89118940892648_0.485273987300002-2 chr17 78321842 78322825 + 0.485273987300002 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 95819 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_65_64_-0.26235680820394_5.89118940892648_0.485273987300002-4 chr4 137485039 137486202 + 0.485273987300002 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 16817 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_65_64_-0.26235680820394_5.89118940892648_0.485273987300002-3 chr18 60670083 60670714 + 0.485273987300002 NA non-coding (NR_045401, exon 3 of 3) non-coding (NR_045401, exon 3 of 3) 6988 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_65_64_-0.26235680820394_5.89118940892648_0.485273987300002 chr10 25272174 25272944 + 0.485273987300002 NA intron (NM_018747, intron 3 of 7) intron (NM_018747, intron 3 of 7) 26604 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak1_65_64_-0.26235680820394_5.89118940892648_0.485273987300002 chr5 73292839 73293499 + 0.485273987300002 NA intron (NM_023429, intron 1 of 8) CpG 375 NM_001159888 68095 Mm.247039 NM_023429 ENSMUSG00000029152 Ociad1 6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018 OCIA domain containing 1 protein-coding common_peak1_110_79_0.18281326882429_6.41333472929951_0.485119537398548 chr10 120227095 120228057 + 0.485119537398548 NA intron (NM_025431, intron 1 of 2) intron (NM_025431, intron 1 of 2) 516 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding common_peak1_110_79_0.18281326882429_6.41333472929951_0.485119537398548-2 chr13 63252754 63254184 + 0.485119537398548 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 13440 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_96_91_-0.211951401645935_6.41758625523405_0.485119537398548-2 chr10 128376515 128378117 + 0.485119537398548 NA intron (NM_172790, intron 1 of 27) CpG 192 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding common_peak1_96_91_-0.211951401645935_6.41758625523405_0.485119537398548 chr16 55525610 55526951 + 0.485119537398548 NA Intergenic Intergenic 31549 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_110_79_0.18281326882429_6.41333472929951_0.485119537398548 chr11 31504151 31504745 + 0.485119537398548 NA Intergenic Intergenic -134387 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_96_91_-0.211951401645935_6.41758625523405_0.485119537398548 chr10 24445869 24447126 + 0.485119537398548 NA Intergenic Intergenic -148945 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_93_66_0.200517133271038_6.16634775709329_0.484951602153905-2 chr12 112578513 112579596 + 0.484951602153905 NA Intergenic Intergenic -9730 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_93_66_0.200517133271038_6.16634775709329_0.484951602153905-2 chr6 119478765 119479480 + 0.484951602153905 NA promoter-TSS (NM_133940) promoter-TSS (NM_133940) -546 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding common_peak1_93_66_0.200517133271038_6.16634775709329_0.484951602153905 chr14 79586801 79587975 + 0.484951602153905 NA promoter-TSS (NM_026474) promoter-TSS (NM_026474) -272 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak1_80_77_-0.232019765734635_6.16939233599493_0.484951602153905-2 chr8 126540078 126540841 + 0.484951602153905 NA Intergenic Intergenic 52977 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_93_66_0.200517133271038_6.16634775709329_0.484951602153905-3 chr6 124755170 124756670 + 0.484951602153905 NA intron (NM_007881, intron 1 of 9) intron (NM_007881, intron 1 of 9) 567 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_80_77_-0.232019765734635_6.16939233599493_0.484951602153905 chr2 157077987 157079197 + 0.484951602153905 NA exon (NM_001164663, exon 1 of 15) exon (NM_001164663, exon 1 of 15) 673 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak2_79_77_-0.249815235037063_6.16049460134372_0.484951602153905 chr16 33251371 33252193 + 0.484951602153905 NA intron (NM_080557, intron 1 of 13) CpG 326 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding common_peak2_93_66_0.200517133271038_6.16634775709329_0.484951602153905 chr10 27987049 27988093 + 0.484951602153905 NA Intergenic Intergenic -87249 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_132_123_-0.190428785840842_6.85898191746645_0.484593477592807 chr16 13255986 13257257 + 0.484593477592807 NA intron (NM_001122667, intron 1 of 16) CpG 140 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_132_123_-0.190428785840842_6.85898191746645_0.484593477592807-2 chr19 43662025 43662951 + 0.484593477592807 NA Intergenic Intergenic 12393 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_50_34_0.26138344261894_5.25997473825444_0.484230028934922 chr17 83513630 83514191 + 0.484230028934922 NA intron (NM_009187, intron 1 of 2) intron (NM_009187, intron 1 of 2) 423 NM_009187 20463 Mm.30072 NM_009187 ENSMUSG00000024248 Cox7a2l COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like protein-coding common_peak1_50_34_0.26138344261894_5.25997473825444_0.484230028934922 chr11 32564084 32564957 + 0.484230028934922 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 31254 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_50_34_0.26138344261894_5.25997473825444_0.484230028934922-2 chr2 102451069 102452089 + 0.484230028934922 NA exon (NM_010218, exon 1 of 1) exon (NM_010218, exon 1 of 1) 213 NM_010218 14221 Mm.29730 NM_010218 ENSMUSG00000075012 Fjx1 - four jointed box 1 protein-coding common_peak1_50_34_0.26138344261894_5.25997473825444_0.484230028934922-5 chr7 45680881 45681925 + 0.484230028934922 NA intron (NM_001271578, intron 3 of 3) intron (NM_001271578, intron 3 of 3) -2619 NM_001358870 243967 Mm.291240 NM_001033356 ENSMUSG00000070564 Ntn5 Gm484 netrin 5 protein-coding common_peak1_50_34_0.26138344261894_5.25997473825444_0.484230028934922-4 chr6 83455826 83456580 + 0.484230028934922 NA intron (NM_001347313, intron 1 of 11) CpG 189 NM_001347313 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding common_peak1_50_34_0.26138344261894_5.25997473825444_0.484230028934922-3 chr5 118560407 118561165 + 0.484230028934922 NA promoter-TSS (NM_172424) promoter-TSS (NM_172424) 67 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_50_34_0.26138344261894_5.25997473825444_0.484230028934922-2 chr2 164456672 164457201 + 0.484230028934922 NA Intergenic Intergenic -4035 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_40_42_-0.348250207528416_5.25213965093789_0.484230028934915 chr11 48817119 48817342 + 0.484230028934915 NA 5' UTR (NM_145377, exon 1 of 6) 5' UTR (NM_145377, exon 1 of 6) 161 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_40_42_-0.348250207528416_5.25213965093789_0.484230028934915-3 chr19 5874741 5875239 + 0.484230028934915 NA intron (NM_026169, intron 1 of 10) intron (NM_026169, intron 1 of 10) 218 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak1_40_42_-0.348250207528416_5.25213965093789_0.484230028934915-4 chr9 109875790 109876338 + 0.484230028934915 NA exon (NM_007658, exon 1 of 15) exon (NM_007658, exon 1 of 15) 485 NM_007658 12530 Mm.307103 NM_007658 ENSMUSG00000032477 Cdc25a D9Ertd393e cell division cycle 25A protein-coding common_peak2_40_42_-0.348250207528416_5.25213965093789_0.484230028934915 chr10 24209600 24209984 + 0.484230028934915 NA Intergenic Intergenic -13725 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_40_42_-0.348250207528416_5.25213965093789_0.484230028934915-3 chr9 58131216 58131719 + 0.484230028934915 NA intron (NM_009291, intron 1 of 18) intron (NM_009291, intron 1 of 18) 2118 NM_009291 20897 Mm.10801 NM_009291 ENSMUSG00000032327 Stra6 AI891933 stimulated by retinoic acid gene 6 protein-coding unique_peak1_40_42_-0.348250207528416_5.25213965093789_0.484230028934915 chr8 70234184 70234436 + 0.484230028934915 NA promoter-TSS (NM_001168290) promoter-TSS (NM_001168290) 84 NM_172755 234373 Mm.284505 NM_172755 ENSMUSG00000036054 Sugp2 Sfrs14|Srsf14|mKIAA0365 SURP and G patch domain containing 2 protein-coding common_peak2_40_42_-0.348250207528416_5.25213965093789_0.484230028934915-2 chr18 77880212 77880880 + 0.484230028934915 NA intron (NM_013831, intron 14 of 14) intron (NM_013831, intron 14 of 14) -57921 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_40_42_-0.348250207528416_5.25213965093789_0.484230028934915-2 chr7 110787602 110788140 + 0.484230028934915 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 15267 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_176_160_-0.157735170137728_7.25204929304575_0.483975347116962 chr19 45074583 45075807 + 0.483975347116962 NA promoter-TSS (NM_001362398) promoter-TSS (NM_001362398) -46 NM_001362398 107250 Mm.24417 NM_178929 ENSMUSG00000025213 Kazald1 AI842353|Bono1|IGFBP-rP10 Kazal-type serine peptidase inhibitor domain 1 protein-coding common_peak1_130_94_0.172206700111443_6.65595895838667_0.483734033295074 chr9 59035812 59037412 + 0.483734033295074 NA promoter-TSS (NM_001042752) promoter-TSS (NM_001042752) -171 NM_008684 18007 Mm.42249 NM_008684 ENSMUSG00000032340 Neo1 2610028H22Rik|AI327052|D930014N22Rik|Igdcc2 neogenin protein-coding common_peak2_114_107_-0.19943228118658_6.65517136157018_0.48373403329505-2 chr8 47673630 47675146 + 0.48373403329505 NA intron (NM_023503, intron 1 of 1) CpG 771 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak2_114_107_-0.19943228118658_6.65517136157018_0.48373403329505 chr15 98144724 98146081 + 0.48373403329505 NA intron (NM_001170711, intron 1 of 3) CpG 300 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding common_peak2_134_124_-0.180635514581293_6.87546652737144_0.483022674584033 chr9 31280576 31281754 + 0.483022674584033 NA Intergenic CpG 9764 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak1_111_80_0.177739131760812_6.42871956876503_0.482975456916943 chr11 4308913 4309723 + 0.482975456916943 NA Intergenic Intergenic 42522 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_111_80_0.177739131760812_6.42871956876503_0.482975456916943-3 chr8 110828314 110829706 + 0.482975456916943 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 9588 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak1_112_80_0.190472698775627_6.43508635227244_0.482975456916943 chr6 120037043 120038607 + 0.482975456916943 NA 5' UTR (NM_001199083, exon 1 of 28) 5' UTR (NM_001199083, exon 1 of 28) 830 NM_001185020 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding common_peak2_111_80_0.177739131760812_6.42871956876503_0.482975456916943 chr6 24663568 24664904 + 0.482975456916943 NA intron (NM_028459, intron 1 of 10) intron (NM_028459, intron 1 of 10) 759 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding common_peak1_111_80_0.177739131760812_6.42871956876503_0.482975456916943-2 chr8 81013842 81014844 + 0.482975456916943 NA exon (NM_027554, exon 1 of 10) exon (NM_027554, exon 1 of 10) 563 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak2_154_142_-0.176819878044973_7.0714613977559_0.48275297242774 chr11 8463526 8464845 + 0.48275297242774 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 200350 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_173_127_0.148693644031478_7.07434682201574_0.48275297242774 chr9 63754208 63756192 + 0.48275297242774 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 2794 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_52_53_-0.309117446893608_5.60032877871666_0.482620205478473 chr13 113045837 113046535 + 0.482620205478473 NA exon (NM_027127, exon 1 of 3) exon (NM_027127, exon 1 of 3) 202 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_64_44_0.246286997306073_5.61499659498271_0.482620205478473 chr1 89656170 89656721 + 0.482620205478473 NA intron (NM_001037136, intron 6 of 16) intron (NM_001037136, intron 6 of 16) 27447 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_63_44_0.224076988741633_5.60389159070049_0.482620205478473 chr17 78321674 78322431 + 0.482620205478473 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 96100 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_52_53_-0.309117446893608_5.60032877871666_0.482620205478473-2 chr16 44745921 44746345 + 0.482620205478473 NA exon (NM_001356392, exon 1 of 5) exon (NM_001356392, exon 1 of 5) 230 NM_001356392 66067 Mm.34520 NM_025332 ENSMUSG00000022668 Gtpbp8 0610037H22Rik GTP-binding protein 8 (putative) protein-coding common_peak1_64_44_0.246286997306073_5.61499659498271_0.482620205478473-2 chr19 41673928 41674241 + 0.482620205478473 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 69772 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak2_64_44_0.246286997306073_5.61499659498271_0.482620205478473-2 chr7 82463745 82464388 + 0.482620205478473 NA intron (NM_001190374, intron 6 of 29) intron (NM_001190374, intron 6 of 29) 128372 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_63_44_0.224076988741633_5.60389159070049_0.482620205478473-2 chr6 93657528 93658067 + 0.482620205478473 NA Intergenic Intergenic 255166 NR_104594 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding common_peak1_53_53_-0.282340651263309_5.61371717653181_0.482620205478473-2 chr13 74808029 74808814 + 0.482620205478473 NA promoter-TSS (NM_009817) promoter-TSS (NM_009817) 339 NM_001301153 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak2_52_53_-0.309117446893608_5.60032877871666_0.482620205478473 chr4 107367801 107368512 + 0.482620205478473 NA intron (NM_028355, intron 1 of 17) CpG 372 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak1_64_44_0.246286997306073_5.61499659498271_0.482620205478473-4 chr8 121651380 121652223 + 0.482620205478473 NA exon (NM_080855, exon 1 of 13) exon (NM_080855, exon 1 of 13) 132 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak2_53_53_-0.282340651263309_5.61371717653181_0.482620205478473 chr8 70656327 70657031 + 0.482620205478473 NA intron (NM_023217, intron 2 of 4) intron (NM_023217, intron 2 of 4) 3059 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_52_53_-0.309117446893608_5.60032877871666_0.482620205478473-2 chr8 71382884 71383449 + 0.482620205478473 NA Intergenic Intergenic -1214 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak1_64_44_0.246286997306073_5.61499659498271_0.482620205478473-3 chr2 130839144 130839721 + 0.482620205478473 NA 5' UTR (NM_001311147, exon 1 of 37) 5' UTR (NM_001311147, exon 1 of 37) 255 NM_001311147 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding common_peak2_52_53_-0.309117446893608_5.60032877871666_0.482620205478473-3 chr9 122117357 122118126 + 0.482620205478473 NA intron (NM_001357776, intron 1 of 5) CpG 282 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_64_44_0.246286997306073_5.61499659498271_0.482620205478473 chr2 31245993 31246547 + 0.482620205478473 NA intron (NM_019681, intron 1 of 7) CpG 347 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak2_53_53_-0.282340651263309_5.61371717653181_0.482620205478473 chr2 168457819 168458588 + 0.482620205478473 NA Intergenic Intergenic 132162 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_63_44_0.224076988741633_5.60389159070049_0.482620205478473-2 chr4 141559596 141560156 + 0.482620205478473 NA Intergenic Intergenic 13714 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_63_44_0.224076988741633_5.60389159070049_0.482620205478473-3 chr8 111624625 111625345 + 0.482620205478473 NA 3' UTR (NM_001168623, exon 5 of 5) 3' UTR (NM_001168623, exon 5 of 5) 5337 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding unique_peak1_64_44_0.246286997306073_5.61499659498271_0.482620205478473 chr8 122171444 122171924 + 0.482620205478473 NA Intergenic Intergenic -110457 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_63_44_0.224076988741633_5.60389159070049_0.482620205478473 chr2 126303876 126304556 + 0.482620205478473 NA Intergenic Intergenic 152075 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak2_64_44_0.246286997306073_5.61499659498271_0.482620205478473-3 chr7 83892207 83892907 + 0.482620205478473 NA intron (NM_023403, intron 1 of 2) intron (NM_023403, intron 1 of 2) 557 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesd 2210015O11Rik|AW537813|Mesdc2|mKIAA0081|mesd|msd mesoderm development LRP chaperone protein-coding common_peak1_53_53_-0.282340651263309_5.61371717653181_0.482620205478473 chr1 58856264 58856853 + 0.482620205478473 NA Intergenic Intergenic 54056 NM_001277926 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_94_67_0.194302532475442_6.18461410748806_0.482409833682749-2 chr19 42128157 42129009 + 0.482409833682749 NA intron (NM_027106, intron 1 of 2) intron (NM_027106, intron 1 of 2) 410 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak1_94_67_0.194302532475442_6.18461410748806_0.482409833682749 chr14 75845348 75846071 + 0.482409833682749 NA promoter-TSS (NR_045294) promoter-TSS (NR_045294) 453 NM_009429 22070 Mm.297482 NM_009429 ENSMUSG00000060126 Tpt1 TCTP|Trt|p21|p23 tumor protein, translationally-controlled 1 protein-coding common_peak1_94_67_0.194302532475442_6.18461410748806_0.482409833682749-3 chr3 86114989 86116028 + 0.482409833682749 NA intron (NM_001082414, intron 9 of 14) intron (NM_001082414, intron 9 of 14) 23350 NR_004417 19870 NR_004417 ENSMUSG00000064984 Snord73a Rnu73a|U73a small nucleolar RNA, C/D box U73A snoRNA common_peak2_81_78_-0.232821180576665_6.18737015788877_0.482409833682749-2 chr7 116333478 116334106 + 0.482409833682749 NA intron (NM_026533, intron 2 of 5) CpG 398 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding common_peak2_81_78_-0.232821180576665_6.18737015788877_0.482409833682749 chr11 78176112 78177336 + 0.482409833682749 NA promoter-TSS (NM_080849) promoter-TSS (NM_080849) -58 NM_080849 140859 Mm.23788 NM_080849 ENSMUSG00000017405 Nek8 4632401F23Rik|b2b1449Clo|jck NIMA (never in mitosis gene a)-related expressed kinase 8 protein-coding common_peak1_81_78_-0.232821180576665_6.18737015788877_0.482409833682749 chr15 81858457 81859434 + 0.482409833682749 NA promoter-TSS (NM_020507) promoter-TSS (NM_020507) -619 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak1_94_67_0.194302532475442_6.18461410748806_0.482409833682749-4 chr8 105264187 105265210 + 0.482409833682749 NA promoter-TSS (NM_015821) promoter-TSS (NM_015821) 50 NM_015821 50788 Mm.334764 NM_015821 ENSMUSG00000033313 Fbxl8 FBL8 F-box and leucine-rich repeat protein 8 protein-coding common_peak1_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-3 chr19 8702636 8703413 + 0.482196053595805 NA Intergenic Intergenic 10873 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_78_55_0.210212744217673_5.91246129416644_0.482196053595805 chr11 22990111 22991026 + 0.482196053595805 NA promoter-TSS (NM_009837) promoter-TSS (NM_009837) -25 NM_009837 12464 Mm.296985 NM_009837 ENSMUSG00000007739 Cct4 2610204B21Rik|A45|C78323|Cctd chaperonin containing Tcp1, subunit 4 (delta) protein-coding common_peak2_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-3 chr2 112239168 112240290 + 0.482196053595805 NA promoter-TSS (NM_207206) promoter-TSS (NM_207206) -112 NM_207206 99010 Mm.33438 NM_207206 ENSMUSG00000027134 Lpcat4 AI505034|Agpat7|Aytl3|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding common_peak1_78_55_0.210212744217673_5.91246129416644_0.482196053595805-2 chr6 52221971 52223005 + 0.482196053595805 NA TTS (NM_010456) TTS (NM_010456) -3915 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak2_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-4 chr4 117119638 117120406 + 0.482196053595805 NA non-coding (NR_024078, exon 7 of 7) non-coding (NR_024078, exon 7 of 7) 5703 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak2_78_55_0.210212744217673_5.91246129416644_0.482196053595805-2 chr5 112292401 112293112 + 0.482196053595805 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 16065 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak2_66_65_-0.262841101718066_5.91297356849942_0.482196053595805 chr3 101516725 101517781 + 0.482196053595805 NA Intergenic Intergenic 87454 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-2 chr16 24427346 24428082 + 0.482196053595805 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -20377 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-2 chr19 43523739 43524418 + 0.482196053595805 NA intron (NM_010324, intron 1 of 8) intron (NM_010324, intron 1 of 8) 527 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak2_66_65_-0.262841101718066_5.91297356849942_0.482196053595805 chr11 76494025 76494942 + 0.482196053595805 NA promoter-TSS (NM_001346670) promoter-TSS (NM_001346670) 12 NM_001346670 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-4 chr5 137072436 137073261 + 0.482196053595805 NA promoter-TSS (NM_008871) promoter-TSS (NM_008871) -576 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak1_66_65_-0.262841101718066_5.91297356849942_0.482196053595805 chr1 133609785 133610341 + 0.482196053595805 NA intron (NM_009227, intron 1 of 4) CpG 217 NM_009227 20643 Mm.249110 NM_009227 ENSMUSG00000090553 Snrpe AL022645|C76690|SME small nuclear ribonucleoprotein E protein-coding common_peak2_66_65_-0.262841101718066_5.91297356849942_0.482196053595805-5 chr5 124249788 124250331 + 0.482196053595805 NA promoter-TSS (NM_011256) promoter-TSS (NM_011256) -299 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding common_peak1_78_55_0.210212744217673_5.91246129416644_0.482196053595805 chr15 89429524 89429859 + 0.482196053595805 NA non-coding (NR_004843, exon 1 of 27) non-coding (NR_004843, exon 1 of 27) 236 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak1_277_207_0.11948235366875_7.76018089497547_0.482127754055316 chr16 93911414 93915008 + 0.482127754055316 NA Intergenic Intergenic 16356 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding common_peak1_282_250_-0.126085746142349_7.9085006808796_0.482038426148779 chr8 40510660 40512728 + 0.482038426148779 NA promoter-TSS (NM_011135) promoter-TSS (NM_011135) 60 NM_001271543 18983 Mm.272551 NM_011135 ENSMUSG00000031601 Cnot7 AU022737|CAF-1|Caf1|Pop2 CCR4-NOT transcription complex, subunit 7 protein-coding common_peak1_39_26_0.287754461234962_4.89876473278095_0.481798116163919-2 chr13 104177791 104178352 + 0.481798116163919 NA promoter-TSS (NM_001361539) promoter-TSS (NM_001361539) 395 NM_025879 66975 Mm.272541 NM_025879 ENSMUSG00000021711 Trappc13 2410002O22Rik|2610524F24Rik|AI451892|AU017229 trafficking protein particle complex 13 protein-coding unique_peak1_39_26_0.287754461234962_4.89876473278095_0.481798116163919 chr12 3718060 3718821 + 0.481798116163919 NA non-coding (NR_149729, exon 10 of 19) non-coding (NR_149729, exon 10 of 19) -88540 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-6 chr2 59584237 59584731 + 0.481798116163919 NA Intergenic Intergenic -27558 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919 chr1 64942269 64942549 + 0.481798116163919 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 14415 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-4 chr11 51921268 51921653 + 0.481798116163919 NA Intergenic Intergenic -46171 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_39_26_0.287754461234962_4.89876473278095_0.481798116163919-5 chr2 152674086 152674615 + 0.481798116163919 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 4889 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-9 chr5 92767758 92768207 + 0.481798116163919 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 20580 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-10 chr5 93128022 93128523 + 0.481798116163919 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 34856 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_39_26_0.287754461234962_4.89876473278095_0.481798116163919-4 chr2 68470945 68471473 + 0.481798116163919 NA intron (NM_016866, intron 1 of 17) CpG 772 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-2 chr1 89817383 89817923 + 0.481798116163919 NA intron (NM_001037136, intron 12 of 16) intron (NM_001037136, intron 12 of 16) 113523 NM_010262 14472 Mm.204730 NM_010262 ENSMUSG00000034486 Gbx2 D130058E05Rik|Gbx-2|MMoxA|Stra7 gastrulation brain homeobox 2 protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-7 chr3 27657110 27657673 + 0.481798116163919 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 53061 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-3 chr11 22981815 22982236 + 0.481798116163919 NA intron (NM_144514, intron 1 of 2) CpG 259 NM_144514 17846 Mm.259903 NM_144514 ENSMUSG00000051355 Commd1 AI256843|Murr1|U2/Mu COMM domain containing 1 protein-coding common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-5 chr2 26122323 26122644 + 0.481798116163919 NA intron (NM_026495, intron 1 of 5) CpG 328 NM_026495 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding common_peak1_39_26_0.287754461234962_4.89876473278095_0.481798116163919 chr11 88467347 88467781 + 0.481798116163919 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 114791 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA common_peak2_39_26_0.287754461234962_4.89876473278095_0.481798116163919-8 chr5 24576926 24577241 + 0.481798116163919 NA 5' UTR (NM_001359205, exon 1 of 14) 5' UTR (NM_001359205, exon 1 of 14) 263 NM_001359205 27407 Mm.21629 NM_013853 ENSMUSG00000028953 Abcf2 0710005O05Rik|Drr3|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 protein-coding common_peak1_39_26_0.287754461234962_4.89876473278095_0.481798116163919-3 chr2 32678532 32679113 + 0.481798116163919 NA intron (NM_001146348, intron 11 of 14) intron (NM_001146348, intron 11 of 14) 8944 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-2 chr10 59902157 59902784 + 0.481798116163913 NA Intergenic Intergenic 22879 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-9 chr9 15306324 15306524 + 0.481798116163913 NA promoter-TSS (NM_001199484) promoter-TSS (NM_001199484) 24 NM_001199484 70984 Mm.261842 NM_133732 ENSMUSG00000031938 4931406C07Rik - RIKEN cDNA 4931406C07 gene protein-coding common_peak1_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-2 chr9 58309303 58309693 + 0.481798116163913 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 3714 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-4 chr8 22506768 22507262 + 0.481798116163913 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -30136 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-2 chr2 151976231 151976643 + 0.481798116163913 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) -2456 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-4 chr3 65659142 65659756 + 0.481798116163913 NA TTS (NR_106200) TTS (NR_106200) 161 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-6 chr19 30923769 30924207 + 0.481798116163913 NA intron (NM_001013833, intron 4 of 17) intron (NM_001013833, intron 4 of 17) 6974 NR_033643 625995 Mm.454508 NR_033643 Gm6642 EG625995 ubiquitin-like 5 pseudogene pseudo common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913 chr1 166001603 166001987 + 0.481798116163913 NA intron (NM_198932, intron 1 of 15) CpG 839 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding unique_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-2 chr19 38004838 38005397 + 0.481798116163913 NA intron (NM_001302140, intron 3 of 53) intron (NM_001302140, intron 3 of 53) 38460 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-2 chr5 142464038 142464430 + 0.481798116163913 NA intron (NM_172725, intron 1 of 16) CpG 303 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-7 chr8 46941480 46942013 + 0.481798116163913 NA Intergenic Intergenic -45141 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-10 chr9 111405323 111405751 + 0.481798116163913 NA Intergenic Intergenic -33544 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-8 chr8 119710676 119711102 + 0.481798116163913 NA intron (NM_026922, intron 1 of 26) intron (NM_026922, intron 1 of 26) 10880 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913 chr13 21778937 21779279 + 0.481798116163913 NA TTS (NM_020034) TTS (NM_020034) 1517 NM_020034 56702 Mm.221314 NM_020034 ENSMUSG00000058773 Hist1h1b H1.5|H1B|H1f5|H1s-3 histone cluster 1, H1b protein-coding unique_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913 chr19 44931261 44931736 + 0.481798116163913 NA intron (NM_172638, intron 1 of 19) CpG 379 NM_001081225 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-7 chr4 149874733 149875339 + 0.481798116163913 NA Intergenic Intergenic 79970 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-4 chr13 98532873 98533361 + 0.481798116163913 NA Intergenic Intergenic -98052 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913 chr1 193389260 193389860 + 0.481798116163913 NA Intergenic Intergenic -19278 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913 chr14 11612096 11612510 + 0.481798116163913 NA intron (NM_008981, intron 1 of 29) intron (NM_008981, intron 1 of 29) 58750 NM_008981 19270 Mm.431266 NM_008981 ENSMUSG00000021745 Ptprg 5430405N12Rik|AW046354|AW549872|RPTPgamma protein tyrosine phosphatase, receptor type, G protein-coding common_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-5 chr8 107503760 107504112 + 0.481798116163913 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -47308 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-5 chr18 44472014 44472562 + 0.481798116163913 NA intron (NM_001085373, intron 11 of 18) intron (NM_001085373, intron 11 of 18) 91788 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-5 chr3 132983672 132984239 + 0.481798116163913 NA intron (NM_001356309, intron 11 of 11) intron (NM_001356309, intron 11 of 11) -33664 NM_033525 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-3 chr3 21950650 21951111 + 0.481798116163913 NA Intergenic Intergenic -125772 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_31_33_-0.364477776605788_4.90522395294744_0.481798116163913 chr18 15063896 15064316 + 0.481798116163913 NA promoter-TSS (NM_001142731) promoter-TSS (NM_001142731) -524 NM_001142731 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding common_peak1_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-3 chr8 3499920 3500317 + 0.481798116163913 NA promoter-TSS (NM_053177) promoter-TSS (NM_053177) -401 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding common_peak2_30_33_-0.409958322124313_4.88248368018818_0.481798116163913-6 chr4 124708470 124708981 + 0.481798116163913 NA TTS (NM_010213) TTS (NM_010213) -6136 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-3 chr12 16893352 16893883 + 0.481798116163913 NA Intergenic B1_Mus1|SINE|Alu -1361 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak2_31_33_-0.364477776605788_4.90522395294744_0.481798116163913-8 chr6 31112040 31112507 + 0.481798116163913 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -49180 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_227_204_-0.143591001879333_7.60768459856578_0.481493343697658 chr5 5692444 5694610 + 0.481493343697658 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 562 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_135_125_-0.181559025309953_6.88650041084494_0.481478542744403 chr15 35370828 35371963 + 0.481478542744403 NA promoter-TSS (NM_177151) promoter-TSS (NM_177151) -151 NM_177151 666173 Mm.309250 NM_177151 ENSMUSG00000037646 Vps13b 1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032 vacuolar protein sorting 13B protein-coding common_peak2_135_125_-0.181559025309953_6.88650041084494_0.481478542744403 chr4 136601495 136602677 + 0.481478542744403 NA intron (NM_001356567, intron 1 of 19) CpG 637 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak2_152_111_0.157092160160514_6.88590100213786_0.481478542744403 chr9 108339150 108340528 + 0.481478542744403 NA exon (NM_001329528, exon 3 of 3) exon (NM_001329528, exon 3 of 3) 759 NM_001329527 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding common_peak2_203_183_-0.147005455639595_7.45005922823722_0.480916508957382 chr13 49186808 49188716 + 0.480916508957382 NA intron (NM_013610, intron 1 of 3) CpG 215 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak1_98_93_-0.213742244625669_6.4477177293648_0.48088078471097-3 chr8 11391881 11392486 + 0.48088078471097 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -79357 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_113_81_0.185392072581273_6.45024804090872_0.48088078471097 chr13 108214455 108215661 + 0.48088078471097 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 654 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak1_98_93_-0.213742244625669_6.4477177293648_0.48088078471097-2 chr15 3581440 3582614 + 0.48088078471097 NA promoter-TSS (NM_001286370) promoter-TSS (NM_001286370) -185 NM_001286370 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding common_peak1_98_93_-0.213742244625669_6.4477177293648_0.48088078471097 chr11 107479411 107480466 + 0.48088078471097 NA intron (NM_025894, intron 1 of 10) intron (NM_025894, intron 1 of 10) 410 NM_025894 66997 Mm.491171 NM_025894 ENSMUSG00000020720 Psmd12 1500002F15Rik|AI480719|P55 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 protein-coding common_peak2_284_252_-0.127447578314317_7.91926978553715_0.48054163277302 chr10 99260500 99262940 + 0.48054163277302 NA Intergenic CpG -1511 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_199_147_0.13873553737687_7.27882113431738_0.480431288700555 chr8 105170767 105172206 + 0.480431288700555 NA intron (NM_001161456, intron 2 of 4) CpG-14413 812 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak2_117_109_-0.189013607775225_6.68685290963705_0.480164237676975-2 chr6 52713669 52714884 + 0.480164237676975 NA 5' UTR (NM_001355596, exon 1 of 18) 5' UTR (NM_001355596, exon 1 of 18) 111 NM_001355596 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak2_116_109_-0.201205314187882_6.68075705643072_0.480164237676975 chr1 182026501 182028304 + 0.480164237676975 NA Intergenic Intergenic -7422 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak1_116_109_-0.201205314187882_6.68075705643072_0.480164237676975 chr10 77621553 77623071 + 0.480164237676975 NA promoter-TSS (NM_019803) promoter-TSS (NM_019803) -9 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak2_133_96_0.174585195880016_6.68720544012714_0.480164237676975 chr5 90930925 90932467 + 0.480164237676975 NA intron (NM_026788, intron 1 of 7) intron (NM_026788, intron 1 of 7) 500 NM_026788 665563 Mm.153030 NM_026788 ENSMUSG00000029376 Mthfd2l 1110019K23Rik|C630010D07Rik methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like protein-coding common_peak1_117_109_-0.189013607775225_6.68685290963705_0.480164237676975 chr8 36659833 36660503 + 0.480164237676975 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -46225 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_117_109_-0.189013607775225_6.68685290963705_0.480164237676975 chr4 62359871 62361361 + 0.480164237676975 NA promoter-TSS (NM_175090) promoter-TSS (NM_175090) -20 NM_001045528 338355 Mm.357792 NM_001045528 ENSMUSG00000066151 Fkbp15 BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674 FK506 binding protein 15 protein-coding common_peak1_133_96_0.174585195880016_6.68720544012714_0.480164237676975 chr3 135422681 135424429 + 0.480164237676975 NA promoter-TSS (NM_025902) promoter-TSS (NM_025902) -122 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding common_peak1_175_129_0.142697630422118_7.09371662823951_0.480087660123505 chr17 17623596 17626094 + 0.480087660123505 NA promoter-TSS (NM_172827) promoter-TSS (NM_172827) -356 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak2_157_144_-0.169396403312902_7.09521088835848_0.480087660123505 chr4 86671487 86674071 + 0.480087660123505 NA Intergenic Intergenic -2720 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_157_144_-0.169396403312902_7.09521088835848_0.480087660123505 chr11 86587301 86588483 + 0.480087660123505 NA intron (NM_001356531, intron 10 of 11) B1_Mur3|SINE|Alu -3734 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_96_68_0.203086097632909_6.21006750559462_0.479937426256323 chr15 77892542 77893361 + 0.479937426256323 NA Intergenic B1_Mus1|SINE|Alu 36043 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_95_68_0.188241230520593_6.20264507203847_0.479937426256323 chr1 59482381 59483524 + 0.479937426256323 NA 5' UTR (NM_008057, exon 1 of 1) 5' UTR (NM_008057, exon 1 of 1) 805 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding common_peak1_96_68_0.203086097632909_6.21006750559462_0.479937426256323-2 chr17 26584796 26585555 + 0.479937426256323 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 23663 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_95_68_0.188241230520593_6.20264507203847_0.479937426256323 chr6 90369603 90370337 + 0.479937426256323 NA exon (NM_030260, exon 1 of 6) exon (NM_030260, exon 1 of 6) 476 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak2_42_43_-0.313189088427865_5.30283707442336_0.479515789778906-3 chr14 69088502 69089163 + 0.479515789778906 NA Intergenic Intergenic 59543 NM_009285 20855 Mm.20911 NM_009285 ENSMUSG00000014813 Stc1 Stc stanniocalcin 1 protein-coding common_peak2_41_43_-0.346896922617917_5.28598315732834_0.479515789778906 chr13 45956413 45957039 + 0.479515789778906 NA intron (NM_001199304, intron 1 of 6) intron (NM_001199304, intron 1 of 6) 8265 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-3 chr6 55179964 55180366 + 0.479515789778906 NA Intergenic Intergenic -5175 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak1_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-2 chr14 14703131 14703570 + 0.479515789778906 NA intron (NM_001360513, intron 1 of 25) CpG 325 NM_001360509 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak2_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-5 chr8 110813140 110813951 + 0.479515789778906 NA intron (NM_133953, intron 22 of 25) intron (NM_133953, intron 22 of 25) -7621 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-2 chr16 25061978 25062684 + 0.479515789778906 NA intron (NR_040374, intron 1 of 2) intron (NR_040374, intron 1 of 2) 2692 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_42_43_-0.313189088427865_5.30283707442336_0.479515789778906-2 chr7 80261254 80261831 + 0.479515789778906 NA TTS (NM_177765) TTS (NM_177765) 327 NM_031375 83485 Mm.21175 NM_031375 ENSMUSG00000047084 Ngrn AW552001 neugrin, neurite outgrowth associated protein-coding common_peak2_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-3 chr2 30995166 30995854 + 0.479515789778906 NA intron (NM_028846, intron 1 of 24) intron (NM_028846, intron 1 of 24) 13231 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak2_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-4 chr3 103791389 103791792 + 0.479515789778906 NA promoter-TSS (NM_001301306) promoter-TSS (NM_001301306) -27 NM_001301304 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_42_43_-0.313189088427865_5.30283707442336_0.479515789778906 chr10 128303361 128303977 + 0.479515789778906 NA intron (NM_001358822, intron 1 of 25) intron (NM_001358822, intron 1 of 25) 334 NM_001252326 103135 Mm.244183 NM_133992 ENSMUSG00000005682 Pan2 1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710 PAN2 poly(A) specific ribonuclease subunit protein-coding common_peak2_42_43_-0.313189088427865_5.30283707442336_0.479515789778906-4 chr2 101678479 101678934 + 0.479515789778906 NA intron (NM_001303273, intron 1 of 6) CpG 286 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding common_peak1_42_43_-0.313189088427865_5.30283707442336_0.479515789778906 chr10 95231841 95232377 + 0.479515789778906 NA intron (NM_001330138, intron 2 of 2) intron (NM_001330138, intron 2 of 2) -86284 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak1_41_43_-0.346896922617917_5.28598315732834_0.479515789778906 chr12 86106412 86107013 + 0.479515789778906 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 24151 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_42_43_-0.313189088427865_5.30283707442336_0.479515789778906-2 chr11 3536527 3536942 + 0.479515789778906 NA intron (NM_001159284, intron 3 of 21) intron (NM_001159284, intron 3 of 21) 2558 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_41_43_-0.346896922617917_5.28598315732834_0.479515789778906-4 chr8 126833484 126833851 + 0.479515789778906 NA Intergenic Intergenic -15353 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_51_35_0.248558193439557_5.29420409816209_0.479515789778899-2 chr3 94443416 94443898 + 0.479515789778899 NA intron (NM_030116, intron 1 of 6) CpG 321 NM_030116 78523 Mm.218515 NM_030116 ENSMUSG00000028140 Mrpl9 8030480E20Rik|AA409733|C330013D18Rik|L9mt mitochondrial ribosomal protein L9 protein-coding common_peak2_51_35_0.248558193439557_5.29420409816209_0.479515789778899-5 chr8 121952293 121953000 + 0.479515789778899 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 2154 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_51_35_0.248558193439557_5.29420409816209_0.479515789778899 chr11 20249059 20249976 + 0.479515789778899 NA promoter-TSS (NM_172260) promoter-TSS (NM_172260) -93 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding common_peak1_51_35_0.248558193439557_5.29420409816209_0.479515789778899-5 chr2 128133694 128134551 + 0.479515789778899 NA intron (NM_207681, intron 3 of 4) intron (NM_207681, intron 3 of 4) 6547 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_51_35_0.248558193439557_5.29420409816209_0.479515789778899-3 chr4 123616814 123617570 + 0.479515789778899 NA TTS (NR_105824) TTS (NR_105824) 772 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_51_35_0.248558193439557_5.29420409816209_0.479515789778899-3 chr18 36496756 36497303 + 0.479515789778899 NA Intergenic Intergenic 18776 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_51_35_0.248558193439557_5.29420409816209_0.479515789778899-2 chr16 31602805 31603484 + 0.479515789778899 NA Intergenic B1_Mus1|SINE|Alu -14989 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_51_35_0.248558193439557_5.29420409816209_0.479515789778899 chr2 109696391 109696864 + 0.479515789778899 NA intron (NM_001285417, intron 1 of 1) intron (NM_001285417, intron 1 of 1) 2218 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_51_35_0.248558193439557_5.29420409816209_0.479515789778899-4 chr4 151995543 151996036 + 0.479515789778899 NA intron (NM_172705, intron 1 of 3) CpG 390 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak1_51_35_0.248558193439557_5.29420409816209_0.479515789778899-4 chr19 37375660 37376301 + 0.479515789778899 NA promoter-TSS (NM_010615) promoter-TSS (NM_010615) -423 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding common_peak2_180_164_-0.16112762418769_7.28575840215197_0.479280267348099 chr12 85373620 85375321 + 0.479280267348099 NA exon (NM_026775, exon 1 of 5) exon (NM_026775, exon 1 of 5) 247 NM_026775 68581 Mm.379159 NM_026775 ENSMUSG00000021248 Tmed10 1110014C03Rik|Tmp21|p23|p24delta1 transmembrane p24 trafficking protein 10 protein-coding common_peak2_200_148_0.136165119832437_7.28725108037838_0.479280267348099 chr3 121647039 121648608 + 0.479280267348099 NA Intergenic MLT1A1|LTR|ERVL-MaLR -1370 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-2 chr1 171246645 171246978 + 0.479250674391597 NA intron (NM_153064, intron 1 of 12) intron (NM_153064, intron 1 of 12) 311 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-9 chrX 13037447 13037985 + 0.479250674391597 NA Intergenic Intergenic -4299 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-10 chr7 109546406 109546735 + 0.479250674391597 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 26438 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-2 chr14 73234402 73234694 + 0.479250674391597 NA intron (NM_009029, intron 17 of 26) intron (NM_009029, intron 17 of 26) -3343 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-5 chr4 89055600 89056021 + 0.479250674391597 NA intron (NR_033533, intron 1 of 2) intron (NR_033533, intron 1 of 2) 5503 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA unique_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-2 chr4 139230299 139230677 + 0.479250674391597 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 36377 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597 chr1 40220010 40220393 + 0.479250674391597 NA Intergenic Intergenic -4879 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-19 chr8 10925332 10925695 + 0.479250674391597 NA non-coding (NR_030715, exon 3 of 3) non-coding (NR_030715, exon 3 of 3) 2944 NR_030715 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597 chr13 55599803 55600333 + 0.479250674391597 NA 5' UTR (NM_001311137, exon 1 of 5) 5' UTR (NM_001311137, exon 1 of 5) 172 NM_001311137 218271 Mm.139825 NM_146045 ENSMUSG00000021504 B4galt7 - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-6 chr12 71889141 71889673 + 0.479250674391597 NA promoter-TSS (NM_001286452) promoter-TSS (NM_001286452) -136 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-7 chr12 80212543 80213047 + 0.479250674391597 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 47576 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-10 chr19 7557516 7557960 + 0.479250674391597 NA 5' UTR (NM_001362425, exon 1 of 5) 5' UTR (NM_001362425, exon 1 of 5) 253 NM_001362425 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 AdPLA|C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-7 chr17 75345588 75345834 + 0.479250674391597 NA intron (NM_001331234, intron 20 of 28) intron (NM_001331234, intron 20 of 28) -90194 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-8 chr7 126884394 126884610 + 0.479250674391597 NA 5' UTR (NM_001163775, exon 1 of 16) 5' UTR (NM_001163775, exon 1 of 16) 465 NM_001163775 381921 Mm.259634 NM_001163774 ENSMUSG00000059981 Taok2 1110033K02Rik|B230344N16|MAP3K17|PSK|PSK1|TAO1|TAO2|mKIAA0881 TAO kinase 2 protein-coding unique_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-2 chr10 95779839 95780284 + 0.479250674391597 NA Intergenic Intergenic -160602 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-14 chr3 96593787 96594197 + 0.479250674391597 NA intron (NM_027241, intron 1 of 7) intron (NM_027241, intron 1 of 7) 189 NM_027241 69870 Mm.292739 NM_027241 ENSMUSG00000028104 Polr3gl 2010003I19Rik polymerase (RNA) III (DNA directed) polypeptide G like protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-11 chr8 126845737 126846100 + 0.479250674391597 NA Intergenic Intergenic -3102 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-13 chr3 60604567 60604999 + 0.479250674391597 NA intron (NM_001253711, intron 3 of 7) intron (NM_001253711, intron 3 of 7) 103604 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-7 chr7 80900927 80901154 + 0.479250674391597 NA non-coding (NR_027976, exon 1 of 7) non-coding (NR_027976, exon 1 of 7) 229 NR_152101 71968 Mm.274226 NM_028026 ENSMUSG00000025722 Wdr73 1200011I23Rik|2410008B13Rik|AI848574|C85352 WD repeat domain 73 protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-7 chr2 32685144 32685375 + 0.479250674391597 NA intron (NM_010236, intron 13 of 14) intron (NM_010236, intron 13 of 14) 2507 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-8 chr15 28159115 28159355 + 0.479250674391597 NA Intergenic Intergenic -44531 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding unique_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597 chr12 80210895 80211356 + 0.479250674391597 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 49246 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597 chr1 134082737 134083115 + 0.479250674391597 NA Intergenic Intergenic -3771 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-3 chr4 149400891 149401279 + 0.479250674391597 NA intron (NM_022022, intron 1 of 26) intron (NM_022022, intron 1 of 26) 25546 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-5 chr17 35699348 35699744 + 0.479250674391597 NA intron (NM_172962, intron 1 of 16) ID_B1|SINE|B4 1044 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-12 chr3 38886698 38887156 + 0.479250674391597 NA promoter-TSS (NM_183221) promoter-TSS (NM_183221) -13 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-9 chr18 35299459 35299806 + 0.479250674391597 NA intron (NM_001360814, intron 7 of 9) intron (NM_001360814, intron 7 of 9) -84608 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-6 chr6 135363057 135363332 + 0.479250674391597 NA intron (NM_001288628, intron 1 of 5) intron (NM_001288628, intron 1 of 5) 263 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-6 chr19 55439730 55440054 + 0.479250674391597 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 123835 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-13 chr8 60792350 60793075 + 0.479250674391597 NA Intergenic Intergenic -97681 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-16 chr4 136450376 136451063 + 0.479250674391597 NA Intergenic B1_Mus2|SINE|Alu -19042 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-12 chr7 100987649 100988241 + 0.479250674391597 NA Intergenic Intergenic -23579 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding unique_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-2 chr15 85423428 85423650 + 0.479250674391597 NA intron (NM_016843, intron 9 of 11) intron (NM_016843, intron 9 of 11) 79688 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-9 chr3 38277997 38278262 + 0.479250674391597 NA Intergenic Intergenic -70010 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-20 chr8 24402441 24402806 + 0.479250674391597 NA Intergenic Intergenic 36323 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597 chr1 106716865 106717354 + 0.479250674391597 NA Intergenic Intergenic -2819 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-8 chr2 72285176 72285533 + 0.479250674391597 NA promoter-TSS (NM_001164791) promoter-TSS (NM_001164791) -283 NM_023057 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-2 chr1 171247443 171247722 + 0.479250674391597 NA promoter-TSS (NM_153064) promoter-TSS (NM_153064) -460 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-15 chr3 102475476 102475988 + 0.479250674391597 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 5813 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-4 chr15 6648866 6649146 + 0.479250674391597 NA intron (NM_011815, intron 13 of 17) intron (NM_011815, intron 13 of 17) 5297 NR_155272 102632231 Mm.444780 NR_155272 LOC102632231 - uncharacterized LOC102632231 ncRNA unique_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597 chr2 102873850 102874184 + 0.479250674391597 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 27648 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-3 chr15 79399902 79400541 + 0.479250674391597 NA intron (NM_172608, intron 1 of 8) intron (NM_172608, intron 1 of 8) 2698 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-3 chr17 78524496 78524784 + 0.479250674391597 NA intron (NM_001197028, intron 1 of 12) intron (NM_001197028, intron 1 of 12) 16577 NM_028813 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-18 chr7 17027439 17027778 + 0.479250674391597 NA intron (NM_011155, intron 1 of 12) CpG 306 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-17 chr5 144100483 144100883 + 0.479250674391597 NA exon (NM_001081109, exon 1 of 14) exon (NM_001081109, exon 1 of 14) 247 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-3 chr10 67187008 67187426 + 0.479250674391597 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 1467 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-12 chr9 35559607 35559904 + 0.479250674391597 NA intron (NM_023292, intron 2 of 4) intron (NM_023292, intron 2 of 4) 1195 NM_023292 67049 Mm.425574 NM_023292 ENSMUSG00000032103 Pus3 2610020J05Rik|5730412F04Rik pseudouridine synthase 3 protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-8 chr19 32485525 32485727 + 0.479250674391597 NA promoter-TSS (NM_010799) promoter-TSS (NM_010799) -143 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding unique_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597 chr3 122923896 122924097 + 0.479250674391597 NA promoter-TSS (NM_024461) promoter-TSS (NM_024461) 120 NR_046036 74057 Mm.159123 NR_046036 ENSMUSG00000097852 4933405D12Rik - RIKEN cDNA 4933405D12 gene ncRNA common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-11 chr4 62742606 62743100 + 0.479250674391597 NA Intergenic Intergenic 68879 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-2 chr13 32925351 32925634 + 0.479250674391597 NA Intergenic Intergenic -27352 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-4 chr16 23422859 23423262 + 0.479250674391597 NA Intergenic Intergenic -6073 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597 chr1 72779267 72779580 + 0.479250674391597 NA Intergenic Intergenic -45057 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-9 chr4 43419712 43420012 + 0.479250674391597 NA intron (NM_001037709, intron 2 of 11) intron (NM_001037709, intron 2 of 11) 9272 NM_177377 329831 Mm.454466 NM_177377 ENSMUSG00000042788 Fam166b 4833436C18Rik family with sequence similarity 166, member B protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-4 chr10 128459672 128460029 + 0.479250674391597 NA intron (NM_001114097, intron 1 of 27) CpG 614 NM_001114097 68094 Mm.417338 NM_198160 ENSMUSG00000025369 Smarcc2 5930405J04Rik SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-10 chr3 97158946 97159409 + 0.479250674391597 NA exon (NM_019800, exon 1 of 10) exon (NM_019800, exon 1 of 10) 400 NM_019800 66659 Mm.101368 NM_019800 ENSMUSG00000028093 Acp6 5730559A09Rik|ACPL1|AU022842|mPACPL1 acid phosphatase 6, lysophosphatidic protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-5 chr16 92058401 92058695 + 0.479250674391597 NA intron (NM_080456, intron 1 of 2) CpG 212 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-11 chr3 37722839 37723159 + 0.479250674391597 NA intron (NM_198657, intron 1 of 2) intron (NM_198657, intron 1 of 2) 1361 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-4 chr2 78868307 78868676 + 0.479250674391597 NA promoter-TSS (NM_009454) promoter-TSS (NM_009454) -556 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_22_25_-0.450531436771593_4.4751739997553_0.479250674391597-5 chr11 96776951 96777322 + 0.479250674391597 NA intron (NM_028965, intron 1 of 8) intron (NM_028965, intron 1 of 8) 419 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-6 chr17 26591899 26592540 + 0.479250674391597 NA intron (NM_026170, intron 1 of 9) L1MC1|LINE|L1 30707 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_29_19_0.308604450311766_4.47623032004325_0.479250674391597-4 chr6 100799077 100799347 + 0.479250674391597 NA intron (NM_198612, intron 6 of 6) intron (NM_198612, intron 6 of 6) -34426 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_29_19_0.308604450311766_4.47623032004325_0.479250674391597-3 chr12 104416037 104416263 + 0.479250674391597 NA Intergenic Intergenic 9442 NM_009252 20716 Mm.482074 NM_009252 ENSMUSG00000021091 Serpina3n Spi2-2|Spi2.2|Spi2/eb.4 serine (or cysteine) peptidase inhibitor, clade A, member 3N protein-coding common_peak2_80_56_0.220492438962872_5.94313623364618_0.479219382460968-3 chr2 35978999 35979753 + 0.479219382460968 NA exon (NM_029774, exon 1 of 10) exon (NM_029774, exon 1 of 10) 248 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_80_56_0.220492438962872_5.94313623364618_0.479219382460968-4 chr6 142362295 142363456 + 0.479219382460968 NA TTS (NM_183165) TTS (NM_183165) 17178 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_67_66_-0.263313312694565_5.93443253411049_0.479219382460968-2 chr14 76527969 76528733 + 0.479219382460968 NA Intergenic Intergenic -7496 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_80_56_0.220492438962872_5.94313623364618_0.479219382460968 chr1 192854940 192855485 + 0.479219382460968 NA intron (NR_131748, intron 1 of 1) CpG 284 NR_131748 100503471 Mm.380305 NR_131748 Gm15867 - predicted gene 15867 ncRNA common_peak1_67_66_-0.263313312694565_5.93443253411049_0.479219382460968-2 chr4 133613634 133614372 + 0.479219382460968 NA intron (NM_001017968, intron 3 of 7) intron (NM_001017968, intron 3 of 7) -11835 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_80_56_0.220492438962872_5.94313623364618_0.479219382460968 chr10 25359915 25360837 + 0.479219382460968 NA intron (NM_001358754, intron 1 of 16) CpG 578 NM_001358751 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding common_peak2_79_56_0.202696969660445_5.93423849899496_0.479219382460968 chr3 133543634 133544811 + 0.479219382460968 NA 5' UTR (NM_001346736, exon 1 of 12) 5' UTR (NM_001346736, exon 1 of 12) 168 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding common_peak1_67_66_-0.263313312694565_5.93443253411049_0.479219382460968-3 chr7 28169378 28170498 + 0.479219382460968 NA intron (NM_007991, intron 1 of 8) CpG 190 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak2_79_56_0.202696969660445_5.93423849899496_0.479219382460968-3 chr8 25464353 25465396 + 0.479219382460968 NA Intergenic Intergenic -53885 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_67_66_-0.263313312694565_5.93443253411049_0.479219382460968 chr13 55189598 55190252 + 0.479219382460968 NA Intergenic Intergenic -19857 NM_008739 18193 Mm.168965 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_80_56_0.220492438962872_5.94313623364618_0.479219382460968-2 chr18 77938468 77939038 + 0.479219382460968 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 286 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_79_56_0.202696969660445_5.93423849899496_0.479219382460968-2 chr5 33019081 33019953 + 0.479219382460968 NA intron (NM_011738, intron 1 of 1) intron (NM_011738, intron 1 of 1) 701 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding common_peak1_80_56_0.220492438962872_5.94313623364618_0.479219382460968-2 chr16 85133648 85134398 + 0.479219382460968 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 39684 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_80_56_0.220492438962872_5.94313623364618_0.479219382460968-3 chr4 10874178 10875082 + 0.479219382460968 NA exon (NM_026005, exon 1 of 6) exon (NM_026005, exon 1 of 6) 132 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding common_peak1_79_56_0.202696969660445_5.93423849899496_0.479219382460968 chr9 96773414 96774123 + 0.479219382460968 NA non-coding (NR_102293, exon 5 of 5) non-coding (NR_102293, exon 5 of 5) 8206 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_67_66_-0.263313312694565_5.93443253411049_0.479219382460968 chr14 28960289 28961238 + 0.479219382460968 NA intron (NM_009785, intron 31 of 37) intron (NM_009785, intron 31 of 37) -57445 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak2_67_66_-0.263313312694565_5.93443253411049_0.479219382460968-3 chr15 5220767 5221530 + 0.479219382460968 NA Intergenic Intergenic 23039 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak1_65_45_0.236449048767502_5.64178648044076_0.478941451571433 chr13 48871165 48871775 + 0.478941451571433 NA promoter-TSS (NM_011078) promoter-TSS (NM_011078) -585 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak2_65_45_0.236449048767502_5.64178648044076_0.478941451571433 chr2 117710580 117711351 + 0.478941451571433 NA Intergenic Intergenic 101837 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_65_45_0.236449048767502_5.64178648044076_0.478941451571433-2 chr17 84148439 84149280 + 0.478941451571433 NA Intergenic Intergenic 39088 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_65_45_0.236449048767502_5.64178648044076_0.478941451571433-3 chr4 156082841 156084183 + 0.478941451571433 NA Intergenic Intergenic -23710 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 - predicted gene 13648 ncRNA common_peak1_65_45_0.236449048767502_5.64178648044076_0.478941451571433-4 chr5 64876317 64877006 + 0.478941451571433 NA Intergenic Intergenic 56038 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding common_peak2_54_54_-0.282527412173721_5.6400960074378_0.47894145157142 chr13 104460675 104461383 + 0.47894145157142 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 173194 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_54_54_-0.282527412173721_5.6400960074378_0.47894145157142-2 chr16 21332865 21333630 + 0.47894145157142 NA non-coding (NR_131983, exon 1 of 1) non-coding (NR_131983, exon 1 of 1) 109 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak1_54_54_-0.282527412173721_5.6400960074378_0.47894145157142-4 chr9 86467257 86467736 + 0.47894145157142 NA intron (NM_177208, intron 1 of 38) CpG 342 NM_177208 320615 Mm.245500 NM_177208 ENSMUSG00000034973 Dopey1 B130005I07Rik|BC035275|C130028L17|D9Ertd809e dopey family member 1 protein-coding common_peak1_54_54_-0.282527412173721_5.6400960074378_0.47894145157142-2 chr2 118479125 118479708 + 0.47894145157142 NA exon (NM_009273, exon 2 of 5) exon (NM_009273, exon 2 of 5) 280 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak1_54_54_-0.282527412173721_5.6400960074378_0.47894145157142-3 chr4 141790127 141790704 + 0.47894145157142 NA intron (NM_172338, intron 1 of 14) CpG 229 NM_172338 214063 Mm.39102 NM_172338 ENSMUSG00000040697 Dnajc16 2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962 DnaJ heat shock protein family (Hsp40) member C16 protein-coding common_peak1_54_54_-0.282527412173721_5.6400960074378_0.47894145157142 chr11 86623158 86623712 + 0.47894145157142 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -39277 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_114_82_0.180415789629964_6.46524732616191_0.478833831070768 chr7 28350798 28351606 + 0.478833831070768 NA promoter-TSS (NR_028129) promoter-TSS (NR_028129) -338 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak1_99_94_-0.214611725751884_6.46254974545501_0.478833831070744 chr4 135856177 135857515 + 0.478833831070744 NA intron (NM_001080387, intron 1 of 5) intron (NM_001080387, intron 1 of 5) 775 NM_010178 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding common_peak1_158_145_-0.170273880955946_7.10468761840204_0.478784123896625 chr7 46918643 46920497 + 0.478784123896625 NA intron (NM_021884, intron 1 of 9) intron (NM_021884, intron 1 of 9) 399 NM_001348089 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak1_155_113_0.159373803371339_6.91257691585041_0.478467619266911 chr6 108444360 108446604 + 0.478467619266911 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -44261 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_134_97_0.170438925965586_6.699929307098_0.478431179756661 chr17 21532059 21533283 + 0.478431179756661 NA intron (NR_131123, intron 2 of 2) CpG -2868 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak1_201_149_0.133624229188288_7.29563080509002_0.478143927887924 chr4 155704225 155706083 + 0.478143927887924 NA 5' UTR (NM_026899, exon 1 of 5) 5' UTR (NM_026899, exon 1 of 5) 339 NM_026899 68991 Mm.294770 NM_026899 ENSMUSG00000029038 Ssu72 1190002E22Rik|1500011L16Rik|2610101M12Rik Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) protein-coding common_peak2_97_69_0.197020146847844_6.22779309036889_0.477531576394469 chr19 5688151 5688651 + 0.477531576394469 NA promoter-TSS (NM_022012) promoter-TSS (NM_022012) 507 NM_144868 104401 Mm.329650 NM_144868 ENSMUSG00000054874 Pcnx3 Pcnxl3|mKIAA4073 pecanex homolog 3 protein-coding common_peak1_97_69_0.197020146847844_6.22779309036889_0.477531576394469 chr17 34981388 34982318 + 0.477531576394469 NA promoter-TSS (NM_001110101) promoter-TSS (NM_001110101) -1 NM_001110101 27756 Mm.165735 NM_030597 ENSMUSG00000007050 Lsm2 D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_83_80_-0.234370286438488_6.22266485966538_0.477531576394469 chr5 4103824 4104784 + 0.477531576394469 NA exon (NM_020010, exon 1 of 10) exon (NM_020010, exon 1 of 10) 393 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding common_peak1_97_69_0.197020146847844_6.22779309036889_0.477531576394469-2 chr7 89560263 89560939 + 0.477531576394469 NA Intergenic Intergenic -33414 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_159_146_-0.171140340584422_7.11410217454415_0.477499439167402 chr6 88959284 88960898 + 0.477499439167402 NA Intergenic Intergenic 57840 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_261_232_-0.129178815785134_7.79959673676171_0.477241206760927 chr8 47989310 47990904 + 0.477241206760927 NA exon (NM_133791, exon 1 of 23) exon (NM_133791, exon 1 of 23) 444 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_183_166_-0.154960949824286_7.30622381756191_0.477021991067732 chr15 77840404 77842020 + 0.477021991067732 NA intron (NM_022410, intron 1 of 40) CpG 963 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_138_128_-0.184250204040167_6.91910215340317_0.476999546368067 chr8 13104055 13105461 + 0.476999546368067 NA promoter-TSS (NM_146207) promoter-TSS (NM_146207) 585 NM_178708 234069 Mm.103427 NM_178708 ENSMUSG00000038542 Pcid2 A730042J05Rik PCI domain containing 2 protein-coding common_peak2_139_128_-0.173981222023938_6.92423664441128_0.476999546368067 chr2 45109286 45110807 + 0.476999546368067 NA exon (NM_001355289, exon 3 of 11) exon (NM_001355289, exon 3 of 11) 231 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_156_114_0.155927260080031_6.92345368098439_0.476999546368067 chr9 64340314 64341441 + 0.476999546368067 NA promoter-TSS (NM_001177784) promoter-TSS (NM_001177784) -104 NM_001177784 213550 Mm.268341 NM_172519 ENSMUSG00000032396 Dis3l AV340375 DIS3 like exosome 3'-5' exoribonuclease protein-coding common_peak1_156_114_0.155927260080031_6.92345368098439_0.476999546368067 chr12 86946610 86948392 + 0.476999546368067 NA intron (NM_173735, intron 1 of 3) intron (NM_173735, intron 1 of 3) 158 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak1_156_114_0.155927260080031_6.92345368098439_0.476999546368067-2 chr13 70636579 70638134 + 0.476999546368067 NA intron (NM_144837, intron 1 of 18) CpG 278 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-15 chr6 113045783 113046027 + 0.476916024233333 NA promoter-TSS (NM_001355266) promoter-TSS (NM_001355266) -397 NM_001355266 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-21 chr8 84241849 84242124 + 0.476916024233333 NA Intergenic Intergenic -4944 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-10 chr2 167877190 167877446 + 0.476916024233333 NA Intergenic Intergenic -55009 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-5 chr16 10842682 10842954 + 0.476916024233333 NA 3' UTR (NM_001162932, exon 2 of 2) 3' UTR (NM_001162932, exon 2 of 2) 7759 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-5 chr2 60879160 60879426 + 0.476916024233333 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 2145 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-8 chr7 73606649 73606865 + 0.476916024233333 NA Intergenic Intergenic -48362 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-13 chr7 5061232 5061462 + 0.476916024233333 NA promoter-TSS (NM_133671) promoter-TSS (NM_133671) -796 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-2 chr1 193515959 193516370 + 0.476916024233333 NA Intergenic Intergenic -8634 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333 chr10 34507529 34507741 + 0.476916024233333 NA intron (NM_001358769, intron 2 of 8) intron (NM_001358769, intron 2 of 8) 24235 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-10 chr5 143272695 143272950 + 0.476916024233333 NA Intergenic Intergenic -2800 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-6 chr16 20537505 20537711 + 0.476916024233333 NA intron (NM_001302970, intron 1 of 10) intron (NM_001302970, intron 1 of 10) 2128 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333 chr10 5208062 5208413 + 0.476916024233333 NA intron (NM_001347711, intron 86 of 145) intron (NM_001347711, intron 86 of 145) -13530 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|KASH1|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-5 chr12 86790687 86790911 + 0.476916024233333 NA Intergenic Intergenic 56430 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-16 chr6 112266298 112266744 + 0.476916024233333 NA Intergenic Intergenic -7237 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-8 chr14 121237245 121237494 + 0.476916024233333 NA intron (NM_134082, intron 9 of 26) intron (NM_134082, intron 9 of 26) -11337 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-16 chr8 83567457 83567867 + 0.476916024233333 NA intron (NM_025843, intron 1 of 2) intron (NM_025843, intron 1 of 2) 904 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-11 chr7 45704481 45704728 + 0.476916024233333 NA promoter-TSS (NM_016974) promoter-TSS (NM_016974) -643 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-4 chr14 54109119 54109394 + 0.476916024233333 NA Intergenic Intergenic 144673 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-16 chr7 4690731 4691072 + 0.476916024233333 NA promoter-TSS (NM_001168572) promoter-TSS (NM_001168572) -27 NM_001003920 381979 Mm.297064 NM_001003920 ENSMUSG00000035390 Brsk1 Gm1100|SAD-B|SADB BR serine/threonine kinase 1 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-4 chr11 43547084 43547294 + 0.476916024233333 NA intron (NM_001045530, intron 2 of 5) intron (NM_001045530, intron 2 of 5) 18440 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-12 chr4 119320653 119320957 + 0.476916024233333 NA promoter-TSS (NM_028677) promoter-TSS (NM_028677) -282 NM_001110130 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-8 chr18 65325574 65325848 + 0.476916024233333 NA intron (NM_001037294, intron 4 of 12) intron (NM_001037294, intron 4 of 12) 68177 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-23 chr9 70209181 70209722 + 0.476916024233333 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 2101 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-2 chr13 32509628 32509916 + 0.476916024233333 NA Intergenic Intergenic -171228 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-12 chr6 28262145 28262427 + 0.476916024233333 NA promoter-TSS (NM_001081678) promoter-TSS (NM_001081678) -685 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-2 chr1 59965932 59966163 + 0.476916024233333 NA intron (NM_001037725, intron 4 of 7) intron (NM_001037725, intron 4 of 7) 53041 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-13 chr3 52087917 52088179 + 0.476916024233333 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 16958 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-7 chr13 55023136 55023373 + 0.476916024233333 NA Intergenic Intergenic -1869 NM_001033245 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-20 chr8 3408120 3408483 + 0.476916024233333 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 15293 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-6 chr17 17234932 17235252 + 0.476916024233333 NA intron (NM_001362181, intron 1 of 3) intron (NM_001362181, intron 1 of 3) 189 NM_001362181 102640673 NM_001362181 LOC102640673 - zinc finger protein 431-like protein-coding unique_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333 chr15 76206770 76207017 + 0.476916024233333 NA promoter-TSS (NM_001163540) promoter-TSS (NM_001163540) -572 NM_001163540 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-15 chr7 139253260 139253462 + 0.476916024233333 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 4879 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-9 chr5 31583932 31584125 + 0.476916024233333 NA Intergenic Intergenic -12631 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-4 chr11 96991591 96991838 + 0.476916024233333 NA Intergenic Intergenic -14026 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333 chr1 10231555 10231831 + 0.476916024233333 NA intron (NM_001102430, intron 1 of 37) intron (NM_001102430, intron 1 of 37) 977 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-18 chr7 112458085 112458431 + 0.476916024233333 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 30552 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-6 chr17 26592763 26593143 + 0.476916024233333 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 31441 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-3 chr1 97662088 97662355 + 0.476916024233333 NA promoter-TSS (NM_133825) promoter-TSS (NM_133825) -203 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding unique_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-2 chr8 126550671 126550981 + 0.476916024233333 NA Intergenic Intergenic 42610 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-7 chr17 35816183 35816597 + 0.476916024233333 NA Intergenic Intergenic -5323 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333 chr1 40401395 40401639 + 0.476916024233333 NA Intergenic Intergenic -28053 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-7 chr3 90600519 90600793 + 0.476916024233333 NA intron (NM_011310, intron 1 of 2) intron (NM_011310, intron 1 of 2) 442 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-7 chr17 80887084 80887418 + 0.476916024233333 NA Intergenic Intergenic -9542 NR_131128 320784 Mm.474182 NR_131127 ENSMUSG00000112121 C230072F16Rik - RIKEN cDNA C230072F16 gene ncRNA common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333 chr1 40440584 40440804 + 0.476916024233333 NA 5' UTR (NM_010743, exon 2 of 8) 5' UTR (NM_010743, exon 2 of 8) 1065 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-7 chr3 28722538 28722872 + 0.476916024233333 NA intron (NM_031197, intron 8 of 10) intron (NM_031197, intron 8 of 10) 24802 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-6 chr13 53720832 53721098 + 0.476916024233333 NA Intergenic Intergenic 72380 NR_131010 75252 Mm.401989 NR_131010 ENSMUSG00000113329 4930555G21Rik - RIKEN cDNA 4930555G21 gene ncRNA unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-8 chr17 84069889 84070208 + 0.476916024233333 NA Intergenic Intergenic -8612 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-17 chr8 86501790 86502135 + 0.476916024233333 NA Intergenic Intergenic 64628 NM_172912 244562 Mm.67485 NM_172912 ENSMUSG00000036872 Abcc12 4930467B22Rik|MRP9 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein-coding common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-4 chr16 10842686 10842955 + 0.476916024233333 NA 3' UTR (NM_001162932, exon 2 of 2) 3' UTR (NM_001162932, exon 2 of 2) 7761 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-8 chr4 45484144 45484509 + 0.476916024233333 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 46502 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-2 chr13 63324635 63324886 + 0.476916024233333 NA non-coding (NR_110521, exon 6 of 6) non-coding (NR_110521, exon 6 of 6) -23477 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-4 chr10 43691865 43692374 + 0.476916024233333 NA Intergenic Intergenic -54039 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA unique_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-3 chr5 142926717 142926975 + 0.476916024233333 NA Intergenic Intergenic -20092 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-15 chr6 72360502 72360839 + 0.476916024233333 NA TTS (NM_144916) TTS (NM_144916) 1762 NM_001331171 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-11 chr6 70874665 70875040 + 0.476916024233333 NA intron (NM_010121, intron 2 of 16) intron (NM_010121, intron 2 of 16) 30337 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-9 chr2 29826736 29826947 + 0.476916024233333 NA promoter-TSS (NM_026615) promoter-TSS (NM_026615) -548 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-11 chr2 68980887 68981556 + 0.476916024233333 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 119780 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-8 chr15 38696848 38697286 + 0.476916024233333 NA Intergenic Intergenic 31449 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-22 chr8 122775656 122775992 + 0.476916024233333 NA intron (NM_144932, intron 1 of 9) CpG 338 NM_144932 257633 Mm.334875 NM_144932 ENSMUSG00000015016 Acsf3 BB101783 acyl-CoA synthetase family member 3 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-12 chr2 152671875 152672142 + 0.476916024233333 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 2547 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-4 chr14 20609967 20610232 + 0.476916024233333 NA intron (NM_030180, intron 1 of 20) intron (NM_030180, intron 1 of 20) 8255 NM_030180 78787 Mm.301173 NM_030180 ENSMUSG00000034235 Usp54 4930429G18Rik|AI115571|C030002J06Rik ubiquitin specific peptidase 54 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-5 chr15 66807686 66807937 + 0.476916024233333 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 24018 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333 chr1 190978884 190979156 + 0.476916024233333 NA promoter-TSS (NM_144879) promoter-TSS (NM_144879) -22 NM_144879 226841 Mm.22856 NM_144879 ENSMUSG00000037568 Vash2 B130052G07Rik vasohibin 2 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-19 chr7 116504507 116504707 + 0.476916024233333 NA intron (NM_001130479, intron 1 of 13) CpG 238 NM_001360375 53322 Mm.9901 NM_016773 ENSMUSG00000030659 Nucb2 AI607786|Calnuc|Nefa|Nesfatin-1 nucleobindin 2 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-9 chr18 7003888 7004267 + 0.476916024233333 NA intron (NM_177595, intron 1 of 6) intron (NM_177595, intron 1 of 6) 702 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-5 chr11 101425640 101426102 + 0.476916024233333 NA promoter-TSS (NM_026865) promoter-TSS (NM_026865) -543 NM_001361123 73635 Mm.472804 NM_026865 ENSMUSG00000097487 Ptges3l 1110069E20Rik|1700113I22Rik prostaglandin E synthase 3 like protein-coding common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-6 chr3 67462742 67463074 + 0.476916024233333 NA intron (NM_016753, intron 1 of 5) intron (NM_016753, intron 1 of 5) 999 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-9 chr19 34303228 34303500 + 0.476916024233333 NA intron (NM_007987, intron 1 of 8) intron (NM_007987, intron 1 of 8) 12705 NM_001146708 14102 Mm.1626 NM_007987 ENSMUSG00000024778 Fas AI196731|APO1|APT1|CD95|TNFR6|Tnfrsf6|lpr Fas (TNF receptor superfamily member 6) protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-3 chr11 31718703 31718961 + 0.476916024233333 NA Intergenic Intergenic -46970 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-14 chr6 37354681 37354947 + 0.476916024233333 NA intron (NM_178661, intron 6 of 11) intron (NM_178661, intron 6 of 11) -54838 NM_001347104 320127 Mm.119469 NM_001081206 ENSMUSG00000038665 Dgki 6430604M11Rik|C130010K08Rik diacylglycerol kinase, iota protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-10 chr19 36084020 36084216 + 0.476916024233333 NA intron (NM_019428, intron 1 of 10) intron (NM_019428, intron 1 of 10) 402 NM_019428 54364 Mm.277891 NM_019428 ENSMUSG00000024800 Rpp30 Rnasep2|TSG15 ribonuclease P/MRP 30 subunit protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-9 chr15 67176489 67176726 + 0.476916024233333 NA intron (NM_009177, intron 1 of 8) intron (NM_009177, intron 1 of 8) 275 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-17 chr6 114966510 114966814 + 0.476916024233333 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 2541 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-5 chr11 44947507 44947774 + 0.476916024233333 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 169288 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-2 chr1 168432533 168432839 + 0.476916024233333 NA promoter-TSS (NM_001291509) promoter-TSS (NM_001291509) -517 NM_008783 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333 chr10 121376503 121376779 + 0.476916024233333 NA exon (NM_029364, exon 5 of 14) exon (NM_029364, exon 5 of 14) 11551 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-13 chr8 94052976 94053331 + 0.476916024233333 NA intron (NM_001093757, intron 4 of 11) L1MC4a|LINE|L1 15955 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-17 chr9 21332757 21333027 + 0.476916024233333 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) -4936 NM_152808 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-6 chr13 6194430 6194780 + 0.476916024233333 NA Intergenic Intergenic 333116 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-13 chr4 126314251 126314567 + 0.476916024233333 NA TTS (NM_199473) TTS (NM_199473) 7294 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-10 chr5 144909867 144910314 + 0.476916024233333 NA intron (NM_001038627, intron 1 of 17) ID_B1|SINE|B4 -13274 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-10 chr2 85036630 85036895 + 0.476916024233333 NA promoter-TSS (NM_001136081) promoter-TSS (NM_001136081) -358 NM_182990 20833 Mm.219793 NM_182990 ENSMUSG00000027067 Ssrp1 C81323|Hmg1-rs1|Hmgi-rs3|Hmgox|T160 structure specific recognition protein 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-3 chr13 104286469 104286784 + 0.476916024233333 NA Intergenic Intergenic -1209 NR_136938 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-11 chr3 131110352 131110569 + 0.476916024233333 NA 5' UTR (NM_010703, exon 1 of 12) 5' UTR (NM_010703, exon 1 of 12) 163 NM_001276402 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-14 chr5 115071248 115071545 + 0.476916024233333 NA intron (NM_029012, intron 2 of 10) B1_Mm|SINE|Alu 36566 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding unique_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-2 chr11 88560351 88560691 + 0.476916024233333 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -58730 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-3 chr13 75824734 75824926 + 0.476916024233333 NA Intergenic Intergenic -15055 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-3 chr13 32516267 32516585 + 0.476916024233333 NA Intergenic Intergenic -177882 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-11 chr2 117802440 117802692 + 0.476916024233333 NA Intergenic Intergenic 10236 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-14 chr7 25297621 25297900 + 0.476916024233333 NA 5' UTR (NM_001357350, exon 1 of 5) 5' UTR (NM_001357350, exon 1 of 5) 195 NM_008776 18476 Mm.597 NM_008776 ENSMUSG00000005447 Pafah1b3 Pafahg|mus[g] platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 protein-coding common_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-12 chr8 72727954 72728269 + 0.476916024233333 NA intron (NM_001113248, intron 3 of 6) intron (NM_001113248, intron 3 of 6) 4841 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding unique_peak2_15_18_-0.517887469225789_3.98898377883069_0.476916024233333-7 chr13 45879423 45879730 + 0.476916024233333 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 85415 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_21_13_0.3788754601127_3.99679265211395_0.476916024233333-2 chr12 85601981 85602245 + 0.476916024233333 NA intron (NM_001205053, intron 1 of 3) intron (NM_001205053, intron 1 of 3) 2095 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak2_21_13_0.3788754601127_3.99679265211395_0.476916024233333-3 chr11 85353367 85353609 + 0.476916024233333 NA intron (NM_001166643, intron 1 of 23) intron (NM_001166643, intron 1 of 23) 324 NM_001166643 192197 Mm.209989 NM_138681 ENSMUSG00000059439 Bcas3 1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira breast carcinoma amplified sequence 3 protein-coding common_peak1_291_257_-0.120921779003815_7.95076636592135_0.476905785926435 chr1 58652345 58654062 + 0.476905785926435 NA intron (NR_045007, intron 1 of 1) intron (NR_045007, intron 1 of 1) 562 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak2_291_257_-0.120921779003815_7.95076636592135_0.476905785926435 chr1 58652348 58654096 + 0.476905785926435 NA intron (NR_045007, intron 1 of 1) RSINE1|SINE|B4 581 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak2_316_237_0.113166067197016_7.95140079690645_0.476905785926435 chr13 28951368 28953577 + 0.476905785926435 NA exon (NM_009238, exon 1 of 1) exon (NM_009238, exon 1 of 1) 1227 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak2_115_83_0.175540619025261_6.48008773229139_0.476832982524219 chr16 20535626 20536912 + 0.476832982524219 NA intron (NM_001302970, intron 1 of 10) intron (NM_001302970, intron 1 of 10) 789 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak1_115_83_0.175540619025261_6.48008773229139_0.476832982524219 chr8 94214529 94215455 + 0.476832982524219 NA intron (NM_001357266, intron 1 of 21) CpG 428 NM_172410 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_115_83_0.175540619025261_6.48008773229139_0.476832982524219-2 chr9 71805369 71806488 + 0.476832982524219 NA Intergenic Intergenic -34326 NM_001304362 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak1_101_95_-0.201351020730494_6.48428699035591_0.476832982524194-2 chr5 108461350 108462569 + 0.476832982524194 NA intron (NM_172716, intron 1 of 10) intron (NM_172716, intron 1 of 10) 627 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding common_peak1_101_95_-0.201351020730494_6.48428699035591_0.476832982524194 chr19 53944884 53945872 + 0.476832982524194 NA promoter-TSS (NM_001195338) promoter-TSS (NM_001195338) 502 NM_019658 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak2_100_95_-0.215464601463743_6.47723019998928_0.476832982524194-2 chr5 125070889 125072413 + 0.476832982524194 NA intron (NM_011424, intron 14 of 46) ORR1B1|LTR|ERVL-MaLR 68176 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_101_95_-0.201351020730494_6.48428699035591_0.476832982524194-3 chr9 100545376 100546091 + 0.476832982524194 NA intron (NM_010878, intron 1 of 3) CpG 401 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak2_100_95_-0.215464601463743_6.47723019998928_0.476832982524194 chr19 38029162 38029958 + 0.476832982524194 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 14017 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_573_437_0.0837215984269051_8.81664785881463_0.476750350314533 chr3 58413638 58418405 + 0.476750350314533 NA exon (NM_001081229, exon 1 of 4) exon (NM_001081229, exon 1 of 4) 1301 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak2_135_98_0.166364278110354_6.71253875913479_0.476731355409255 chr12 29937962 29939188 + 0.476731355409255 NA intron (NM_181395, intron 1 of 22) CpG 539 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak2_119_111_-0.190932336004963_6.71188875405512_0.476731355409255 chr7 45016485 45017226 + 0.476731355409255 NA promoter-TSS (NM_001008422) promoter-TSS (NM_001008422) -606 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak1_135_98_0.166364278110354_6.71253875913479_0.476731355409255 chr18 24019900 24021500 + 0.476731355409255 NA promoter-TSS (NM_001357447) promoter-TSS (NM_001357447) 113 NM_021559 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf24 zinc finger protein 24 protein-coding common_peak2_69_67_-0.24316182827778_5.96588192711145_0.476339052167862-3 chr7 5020556 5021311 + 0.476339052167862 NA intron (NM_001033383, intron 1 of 2) intron (NM_001033383, intron 1 of 2) 557 NM_001033383 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding common_peak2_68_67_-0.26377393722663_5.95557587263702_0.476339052167862-2 chr14 26969801 26970468 + 0.476339052167862 NA intron (NM_145221, intron 1 of 21) CpG 417 NM_145221 72993 Mm.202322 NM_145221 ENSMUSG00000040760 Appl1 2900057D21Rik|7330406P05Rik|AI585782|AW209077|BB022931|C88264|DIP13 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 protein-coding common_peak2_68_67_-0.26377393722663_5.95557587263702_0.476339052167862 chr13 113340550 113341390 + 0.476339052167862 NA Intergenic Intergenic 131311 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak1_68_67_-0.26377393722663_5.95557587263702_0.476339052167862 chr16 20610229 20611308 + 0.476339052167862 NA promoter-TSS (NM_177940) promoter-TSS (NM_177940) -7 NM_001357403 208624 Mm.24950 NM_145939 ENSMUSG00000033809 Alg3 D16Ertd36e|not asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) protein-coding common_peak2_69_67_-0.24316182827778_5.96588192711145_0.476339052167862-2 chr3 135628967 135629668 + 0.476339052167862 NA intron (NM_008689, intron 6 of 24) intron (NM_008689, intron 6 of 24) 62230 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_69_67_-0.24316182827778_5.96588192711145_0.476339052167862-4 chr9 108460592 108461029 + 0.476339052167862 NA intron (NM_133744, intron 1 of 1) CpG 292 NM_133744 72454 Mm.46488 NM_133744 ENSMUSG00000049305 Ccdc71 2600016J21Rik coiled-coil domain containing 71 protein-coding common_peak2_69_67_-0.24316182827778_5.96588192711145_0.476339052167862 chr15 7810872 7811611 + 0.476339052167862 NA intron (NM_010275, intron 1 of 2) intron (NM_010275, intron 1 of 2) 1193 NM_001301332 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_81_57_0.212978572472866_5.964470281364_0.476339052167849 chr10 88731230 88731839 + 0.476339052167849 NA promoter-TSS (NM_001037166) promoter-TSS (NM_001037166) 120 NM_025859 104303 Mm.291247 NM_025859 ENSMUSG00000060904 Arl1 2310008D22Rik|AU019749 ADP-ribosylation factor-like 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-29 chr17 87100466 87100782 + 0.47592484417103 NA Intergenic Intergenic -7055 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-2 chr10 93286918 93287222 + 0.47592484417103 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 24089 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-7 chr2 37703532 37703787 + 0.47592484417103 NA Intergenic CpG -15375 NR_039590 100628597 NR_039590 ENSMUSG00000092958 Mir5128 mir-5128|mmu-mir-5128|mu-mir-5128 microRNA 5128 ncRNA unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-46 chr5 147736440 147736746 + 0.47592484417103 NA Intergenic Intergenic -10605 NM_010228 14254 Mm.389712 NM_010228 ENSMUSG00000029648 Flt1 AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1 FMS-like tyrosine kinase 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-60 chr9 96768183 96768426 + 0.47592484417103 NA intron (NR_102294, intron 1 of 2) intron (NR_102294, intron 1 of 2) 2742 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-18 chr8 117331936 117332216 + 0.47592484417103 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -17094 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-2 chr11 58017120 58017353 + 0.47592484417103 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 8172 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-10 chr7 80839421 80839715 + 0.47592484417103 NA Intergenic Intergenic -22540 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103 chr1 132344287 132344475 + 0.47592484417103 NA Intergenic Intergenic 23567 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-25 chr16 92607235 92607446 + 0.47592484417103 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 89989 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-2 chr1 160520380 160520785 + 0.47592484417103 NA intron (NM_013862, intron 13 of 20) L1MD|LINE|L1 57171 NM_001146330 620246 Mm.478780 NM_001146330 Gpr52 EG620246 G protein-coupled receptor 52 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-2 chr1 90604325 90604529 + 0.47592484417103 NA exon (NM_133805, exon 2 of 8) exon (NM_133805, exon 2 of 8) 1002 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-28 chr19 23328949 23329158 + 0.47592484417103 NA intron (NM_174857, intron 11 of 13) intron (NM_174857, intron 11 of 13) -55156 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-5 chr4 107570122 107570397 + 0.47592484417103 NA intron (NM_147221, intron 4 of 10) MIRb|SINE|MIR 113330 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-9 chr10 95355906 95356182 + 0.47592484417103 NA intron (NR_045337, intron 1 of 2) intron (NR_045337, intron 1 of 2) 19768 NR_045337 69629 Mm.250542 NR_045337 ENSMUSG00000100550 2310039L15Rik A53T-syn|G2-3|PrPsynA53T|Tg(Prnp-SNCA*A53T)23Mkle RIKEN cDNA 2310039L15 gene ncRNA common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-15 chr4 53404913 53405135 + 0.47592484417103 NA Intergenic Intergenic -35389 NM_001159633 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-37 chr2 158141962 158142166 + 0.47592484417103 NA intron (NM_009373, intron 2 of 12) intron (NM_009373, intron 2 of 12) 4328 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-5 chr2 36217757 36217959 + 0.47592484417103 NA Intergenic Intergenic -12568 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-10 chr11 103272030 103272293 + 0.47592484417103 NA Intergenic Intergenic -4760 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-30 chr18 23041267 23041471 + 0.47592484417103 NA 5' UTR (NM_001347510, exon 1 of 10) 5' UTR (NM_001347510, exon 1 of 10) 312 NM_199024 319211 Mm.209896 NM_199024 ENSMUSG00000041923 Nol4 1700013J13Rik|4930568N03Rik|Gm1262 nucleolar protein 4 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-32 chr2 60872109 60872327 + 0.47592484417103 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 9220 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-56 chr9 41207802 41208010 + 0.47592484417103 NA intron (NR_040392, intron 1 of 4) intron (NR_040392, intron 1 of 4) 1751 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-58 chr9 70250324 70250547 + 0.47592484417103 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 43085 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-64 chrX 23693172 23693432 + 0.47592484417103 NA 5' UTR (NM_175180, exon 1 of 20) 5' UTR (NM_175180, exon 1 of 20) 251 NM_001305675 72404 Mm.423 NM_175180 ENSMUSG00000036769 Wdr44 2610034K17Rik|RAB11BP|RPH11 WD repeat domain 44 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-31 chr2 18690101 18690291 + 0.47592484417103 NA Intergenic CpG -8826 NM_001001334 381350 Mm.330024 NM_001001334 ENSMUSG00000037708 Spag6 Spag6l sperm associated antigen 6 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-57 chr9 64005531 64005739 + 0.47592484417103 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 16424 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-29 chr19 32486605 32486807 + 0.47592484417103 NA intron (NM_010799, intron 1 of 4) intron (NM_010799, intron 1 of 4) 937 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-10 chr19 42073284 42073483 + 0.47592484417103 NA Intergenic Intergenic 12987 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-6 chr1 184085454 184085705 + 0.47592484417103 NA Intergenic Intergenic 51198 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103 chr1 73545134 73545326 + 0.47592484417103 NA Intergenic Intergenic -137661 NR_003202 723792 Mm.385493 NR_003202 Pinc - pregnancy induced noncoding RNA ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-8 chr11 86618656 86618904 + 0.47592484417103 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -34622 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-53 chr8 17555077 17555365 + 0.47592484417103 NA Intergenic Intergenic -19836 NM_053171 94109 Mm.436988 NM_053171 ENSMUSG00000060924 Csmd1 B930082H09|mKIAA1890 CUB and Sushi multiple domains 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-16 chr13 28633534 28633726 + 0.47592484417103 NA intron (NR_045054, intron 5 of 7) intron (NR_045054, intron 5 of 7) 77243 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-35 chr2 151902676 151902900 + 0.47592484417103 NA Intergenic Intergenic -8419 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-6 chr2 32885310 32885542 + 0.47592484417103 NA intron (NM_146119, intron 1 of 13) RSINE1|SINE|B4 9292 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-6 chr14 76932510 76932749 + 0.47592484417103 NA Intergenic Intergenic 103988 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-48 chr6 91652354 91652679 + 0.47592484417103 NA Intergenic Intergenic -31551 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-61 chr9 107542416 107542618 + 0.47592484417103 NA promoter-TSS (NM_019720) promoter-TSS (NM_019720) 308 NM_018879 56032 Mm.11337 NM_018879 ENSMUSG00000010057 Nprl2 2810446G01Rik|G21|NPR2L|Tusc4 nitrogen permease regulator-like 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-54 chr7 143062598 143062865 + 0.47592484417103 NA intron (NM_133655, intron 2 of 7) intron (NM_133655, intron 2 of 7) -6637 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding unique_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-5 chr8 122239040 122239384 + 0.47592484417103 NA Intergenic Intergenic -42929 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-41 chr4 132388908 132389100 + 0.47592484417103 NA intron (NM_001161797, intron 2 of 12) (CA)n|Simple_repeat|Simple_repeat 33442 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-50 chr6 97919582 97919793 + 0.47592484417103 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) -10130 NM_001178049 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-25 chr18 75684237 75684528 + 0.47592484417103 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 13314 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-4 chr9 110881980 110882240 + 0.47592484417103 NA intron (NM_001146060, intron 1 of 26) intron (NM_001146060, intron 1 of 26) 1788 NM_001146060 235633 Mm.86338 NM_146228 ENSMUSG00000044037 Als2cl 79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018 ALS2 C-terminal like protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-50 chr7 72590220 72590453 + 0.47592484417103 NA Intergenic Intergenic -283741 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-11 chr11 76290348 76290573 + 0.47592484417103 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 46724 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-4 chr2 31770311 31770526 + 0.47592484417103 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 10245 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-17 chr13 63080927 63081144 + 0.47592484417103 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) 116142 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-9 chr5 115328042 115328299 + 0.47592484417103 NA intron (NR_036616, intron 1 of 4) intron (NR_036616, intron 1 of 4) 993 NR_036616 108014 Mm.287826 NM_025573 ENSMUSG00000029538 Srsf9 25kDa|2610029M16Rik|SRp30c|Sfrs9 serine/arginine-rich splicing factor 9 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-19 chr14 13566854 13567226 + 0.47592484417103 NA intron (NM_001163032, intron 3 of 4) intron (NM_001163032, intron 3 of 4) -103836 NM_177624 218739 Mm.39919 NM_177624 ENSMUSG00000044772 Sntn A430083B19Rik sentan, cilia apical structure protein protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-39 chr2 163820376 163820653 + 0.47592484417103 NA promoter-TSS (NM_016873) promoter-TSS (NM_016873) -320 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-65 chrX 73915511 73915798 + 0.47592484417103 NA Intergenic Intergenic -4356 NM_001162424 171207 Mm.482337 NM_138630 ENSMUSG00000031389 Arhgap4 A130009C12Rik|A530015A20Rik|Rgc1|c1|mKIAA0131 Rho GTPase activating protein 4 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-54 chr9 9127217 9127529 + 0.47592484417103 NA intron (NM_027823, intron 3 of 22) intron (NM_027823, intron 3 of 22) -108915 NR_045754 100579151 Mm.412450 NR_045754 ENSMUSG00000085253 Gm16833 - predicted gene, 16833 ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-21 chr17 79235917 79236189 + 0.47592484417103 NA Intergenic ID2|SINE|ID 119038 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-2 chr4 41348279 41348511 + 0.47592484417103 NA promoter-TSS (NM_001290454) promoter-TSS (NM_001290454) -601 NM_001355509 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-5 chr16 42873924 42874150 + 0.47592484417103 NA intron (NR_040522, intron 1 of 1) intron (NR_040522, intron 1 of 1) 1550 NR_040521 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-40 chr4 119293062 119293287 + 0.47592484417103 NA intron (NM_011732, intron 2 of 7) intron (NM_011732, intron 2 of 7) 1339 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-27 chr17 24633283 24633563 + 0.47592484417103 NA promoter-TSS (NM_001286720) promoter-TSS (NM_001286720) 741 NM_008743 18207 Mm.148315 NM_008743 ENSMUSG00000041429 Nthl1 Nth1|Octs3 nth (endonuclease III)-like 1 (E.coli) protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-7 chr10 12807635 12807909 + 0.47592484417103 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 53963 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-49 chr6 124757101 124757378 + 0.47592484417103 NA promoter-TSS (NM_007881) promoter-TSS (NM_007881) -752 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-13 chr3 145105461 145105730 + 0.47592484417103 NA Intergenic Intergenic -6489 NM_178697 229933 Mm.331420 NM_178697 ENSMUSG00000036960 Clca2 4732440A06|AI586120|Clca5 chloride channel accessory 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-15 chr12 104003568 104003780 + 0.47592484417103 NA intron (NM_027997, intron 2 of 4) B3A|SINE|B2 9978 NM_001361912 71907 Mm.326723 NM_027997 ENSMUSG00000058260 Serpina9 2310014L03Rik|AW049635|Centerin serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-12 chr11 105902415 105902619 + 0.47592484417103 NA intron (NM_181071, intron 18 of 25) intron (NM_181071, intron 18 of 25) 41970 NM_007805 13056 Mm.149403 NM_007805 ENSMUSG00000019590 Cyb561 - cytochrome b-561 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-62 chr9 108261982 108262203 + 0.47592484417103 NA intron (NM_001276486, intron 1 of 3) intron (NM_001276486, intron 1 of 3) 1723 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-51 chr7 82648753 82648985 + 0.47592484417103 NA promoter-TSS (NM_177894) promoter-TSS (NM_177894) 255 NM_175317 101592 Mm.238020 NM_175317 ENSMUSG00000038563 Efl1 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1 elongation factor like GPTase 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-56 chr9 44397217 44397475 + 0.47592484417103 NA promoter-TSS (NM_008063) promoter-TSS (NM_008063) 251 NM_001293630 14385 Mm.30087 NM_008063 ENSMUSG00000032114 Slc37a4 100043178|G6PT|G6pt1|GSD-1b|mG6PT solute carrier family 37 (glucose-6-phosphate transporter), member 4 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-23 chr16 14029665 14029875 + 0.47592484417103 NA intron (NM_144518, intron 1 of 5) PB1D10|SINE|Alu -42903 NM_001270718 74482 Mm.484026 NM_028968 ENSMUSG00000065968 Ifitm7 4933438K12Rik|Mil4 interferon induced transmembrane protein 7 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-8 chr3 79678383 79678587 + 0.47592484417103 NA intron (NM_212452, intron 5 of 17) intron (NM_212452, intron 5 of 17) 49406 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-4 chr1 135635839 135636091 + 0.47592484417103 NA Intergenic Intergenic 38189 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-3 chr16 65821275 65821519 + 0.47592484417103 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 5764 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-9 chr18 73947981 73948169 + 0.47592484417103 NA intron (NM_172632, intron 2 of 5) intron (NM_172632, intron 2 of 5) -7046 NM_001360936 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-7 chr11 77513543 77513783 + 0.47592484417103 NA promoter-TSS (NM_001024920) promoter-TSS (NM_001024920) -390 NM_001024920 216964 Mm.341211 NM_001024920 ENSMUSG00000044328 Trp53i13 2410019G02Rik|Tp53i13 transformation related protein 53 inducible protein 13 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-14 chr12 70907919 70908315 + 0.47592484417103 NA Intergenic Intergenic -29740 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-32 chr2 30358689 30358959 + 0.47592484417103 NA intron (NM_001346806, intron 1 of 12) intron (NM_001346806, intron 1 of 12) 492 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-22 chr17 80720703 80720965 + 0.47592484417103 NA intron (NM_001360278, intron 1 of 33) intron (NM_001360278, intron 1 of 33) 7191 NM_001360278 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-3 chr10 69776910 69777120 + 0.47592484417103 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) -148517 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-36 chr3 88594553 88594765 + 0.47592484417103 NA Intergenic Intergenic 15051 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-4 chr12 35292229 35292454 + 0.47592484417103 NA Intergenic Intergenic -97444 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-48 chr6 72958600 72958809 + 0.47592484417103 NA promoter-TSS (NM_001039392) promoter-TSS (NM_001039392) 44 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-27 chr19 5744775 5745054 + 0.47592484417103 NA intron (NM_008520, intron 2 of 27) intron (NM_008520, intron 2 of 27) 4010 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-38 chr2 159732122 159732467 + 0.47592484417103 NA Intergenic Intergenic -215047 NR_040498 71081 Mm.383491 NR_040498 ENSMUSG00000085198 4933416E03Rik - RIKEN cDNA 4933416E03 gene ncRNA unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-59 chrX 123612308 123612614 + 0.47592484417103 NA Intergenic Intergenic 281292 NR_152851 100113394 Mm.435429 NR_152851 Astx5 Astx|Gm14948 amplified spermatogenic transcripts X encoded 5 ncRNA common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-4 chr15 84669260 84669489 + 0.47592484417103 NA intron (NM_001346662, intron 1 of 8) intron (NM_001346662, intron 1 of 8) 6168 NM_001346662 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-14 chr13 3749888 3750176 + 0.47592484417103 NA Intergenic Intergenic 54286 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-35 chr2 126325840 126326130 + 0.47592484417103 NA intron (NM_001359975, intron 26 of 27) intron (NM_001359975, intron 26 of 27) 165568 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-16 chr4 136134613 136134804 + 0.47592484417103 NA Intergenic Intergenic -9114 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-4 chr2 35258237 35258447 + 0.47592484417103 NA intron (NM_001206368, intron 1 of 16) intron (NM_001206368, intron 1 of 16) 1983 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-3 chr11 69578959 69579169 + 0.47592484417103 NA 5' UTR (NM_144824, exon 1 of 10) 5' UTR (NM_144824, exon 1 of 10) 260 NM_144824 216853 Mm.31586 NM_144824 ENSMUSG00000041346 Wrap53 BC021790|Wdr79 WD repeat containing, antisense to Trp53 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-55 chr8 64636079 64636317 + 0.47592484417103 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 56911 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-66 chrX 133603873 133604099 + 0.47592484417103 NA intron (NM_001105245, intron 5 of 5) intron (NM_001105245, intron 5 of 5) -83794 NR_153117 102632590 Mm.403836 NR_153117 ENSMUSG00000096978 Gm26851 - predicted gene, 26851 ncRNA unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-20 chr15 13168099 13168395 + 0.47592484417103 NA intron (NM_007666, intron 1 of 11) intron (NM_007666, intron 1 of 11) 5428 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-45 chr5 96980129 96980339 + 0.47592484417103 NA Intergenic Intergenic -17455 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-23 chr17 87833991 87834334 + 0.47592484417103 NA Intergenic Intergenic -36168 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-44 chr5 91983918 91984155 + 0.47592484417103 NA Intergenic Intergenic -3437 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-6 chr11 68638401 68638643 + 0.47592484417103 NA Intergenic Intergenic 51485 NM_177779 276920 Mm.123046 NM_177779 ENSMUSG00000045915 Ccdc42 A530001H01Rik coiled-coil domain containing 42 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-39 chr4 105226339 105226564 + 0.47592484417103 NA intron (NM_080555, intron 5 of 5) intron (NM_080555, intron 5 of 5) 69104 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-8 chr17 28351159 28351460 + 0.47592484417103 NA promoter-TSS (NM_011566) promoter-TSS (NM_011566) -504 NM_011566 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-11 chr2 35431613 35431936 + 0.47592484417103 NA intron (NM_010283, intron 2 of 8) B3A|SINE|B2 29675 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103 chr10 77388207 77388431 + 0.47592484417103 NA intron (NM_001024838, intron 1 of 11) intron (NM_001024838, intron 1 of 11) 29954 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-13 chr12 69389627 69389912 + 0.47592484417103 NA Intergenic Intergenic 17619 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-36 chr2 157070753 157070961 + 0.47592484417103 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 8408 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-47 chr5 128030110 128030297 + 0.47592484417103 NA intron (NM_172885, intron 3 of 8) intron (NM_172885, intron 3 of 8) 397941 NM_177005 319804 Mm.237888 NM_177005 ENSMUSG00000049971 Glt1d1 5730455A04Rik glycosyltransferase 1 domain containing 1 protein-coding unique_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-3 chr3 138453843 138454085 + 0.47592484417103 NA intron (NM_007410, intron 7 of 8) intron (NM_007410, intron 7 of 8) 10871 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-13 chr11 117260066 117260310 + 0.47592484417103 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -6058 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-9 chr11 97740802 97741000 + 0.47592484417103 NA intron (NM_054051, intron 1 of 9) intron (NM_054051, intron 1 of 9) 3803 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-52 chr7 109582596 109582881 + 0.47592484417103 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 33830 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-21 chr15 34215924 34216133 + 0.47592484417103 NA Intergenic Intergenic -21998 NM_033521 114128 Mm.197518 NM_033521 ENSMUSG00000022257 Laptm4b C330023P13Rik|LAPTM4beta lysosomal-associated protein transmembrane 4B protein-coding common_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-6 chr7 110245501 110245721 + 0.47592484417103 NA intron (NM_009302, intron 2 of 11) intron (NM_009302, intron 2 of 11) 23908 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-7 chr15 77836447 77836651 + 0.47592484417103 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 5626 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-42 chr4 135270519 135270800 + 0.47592484417103 NA intron (NM_013885, intron 1 of 5) intron (NM_013885, intron 1 of 5) 2101 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-17 chr13 70689114 70689338 + 0.47592484417103 NA Intergenic Intergenic -51592 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-18 chr13 110545034 110545350 + 0.47592484417103 NA Intergenic Intergenic 150148 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103 chr12 79948519 79948740 + 0.47592484417103 NA Intergenic Intergenic -12365 NR_131074 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-43 chr4 105404844 105405095 + 0.47592484417103 NA Intergenic Intergenic 247622 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding unique_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103 chr12 111434379 111434722 + 0.47592484417103 NA Intergenic Intergenic -8111 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-10 chr11 49847584 49847833 + 0.47592484417103 NA intron (NM_016961, intron 1 of 11) intron (NM_016961, intron 1 of 11) 957 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-12 chr12 35703635 35703836 + 0.47592484417103 NA Intergenic Intergenic -8617 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-24 chr17 94864945 94865136 + 0.47592484417103 NA intron (NM_001024731, intron 1 of 4) intron (NM_001024731, intron 1 of 4) 122 NM_001024731 100044193 NM_001024731 ENSMUSG00000095193 Gm20939 - predicted gene, 20939 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-2 chr10 19188383 19188580 + 0.47592484417103 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 21243 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-3 chr9 37348587 37348858 + 0.47592484417103 NA promoter-TSS (NM_001081429) promoter-TSS (NM_001081429) -330 NM_001081429 245902 Mm.390150 NM_001081429 ENSMUSG00000034303 Ccdc15 A630039F14Rik|D030074L19 coiled-coil domain containing 15 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-38 chr4 105110047 105110239 + 0.47592484417103 NA promoter-TSS (NM_178143) promoter-TSS (NM_178143) -245 NM_001356568 108079 Mm.48638 NM_178143 ENSMUSG00000028518 Prkaa2 2310008I11Rik|A830082D05|AMPKalpha2 protein kinase, AMP-activated, alpha 2 catalytic subunit protein-coding common_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-3 chr19 36491234 36491459 + 0.47592484417103 NA Intergenic Intergenic -63293 NM_001163471 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain E3 ubiquitin protein ligase 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-46 chr5 105519026 105519218 + 0.47592484417103 NA promoter-TSS (NM_133897) promoter-TSS (NM_133897) -349 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-45 chr5 146687173 146687391 + 0.47592484417103 NA Intergenic G-rich|Low_complexity|Low_complexity -102043 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-20 chr16 23981846 23982088 + 0.47592484417103 NA promoter-TSS (NM_001348026) promoter-TSS (NM_001348026) -684 NM_001348026 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103 chr1 83102051 83102274 + 0.47592484417103 NA Intergenic Intergenic -14604 NM_016960 20297 Mm.116739 NM_016960 ENSMUSG00000026166 Ccl20 CKb4|LARC|MIP-3A|MIP-3[a]|MIP3A|ST38|Scya20|exodus-1 chemokine (C-C motif) ligand 20 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-34 chr2 125307402 125307717 + 0.47592484417103 NA intron (NM_007993, intron 63 of 65) intron (NM_007993, intron 63 of 65) 60044 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-5 chr11 62538718 62539008 + 0.47592484417103 NA exon (NM_028448, exon 1 of 5) exon (NM_028448, exon 1 of 5) 398 NM_028448 73139 Mm.390409 NM_028448 ENSMUSG00000018509 Cenpv 3110013H01Rik|AA671303|Prr6 centromere protein V protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-14 chr4 31425798 31426068 + 0.47592484417103 NA Intergenic Intergenic -538174 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103 chr1 16172507 16172720 + 0.47592484417103 NA Intergenic Intergenic 66731 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-2 chr15 75968704 75968982 + 0.47592484417103 NA promoter-TSS (NM_001347040) promoter-TSS (NM_001347040) -280 NM_001361464 69020 Mm.294295 NM_001081065 ENSMUSG00000034429 Zfp707 1500031N24Rik|AI451708|AW495315 zinc finger protein 707 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-26 chr17 5977848 5978237 + 0.47592484417103 NA intron (NR_151772, intron 2 of 25) intron (NR_151772, intron 2 of 25) 2456 NM_011523 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-42 chr4 56503235 56503527 + 0.47592484417103 NA Intergenic Intergenic 238044 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103 chr1 183934632 183934906 + 0.47592484417103 NA Intergenic Intergenic 99229 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-16 chr13 43017717 43018002 + 0.47592484417103 NA intron (NM_001005740, intron 2 of 12) intron (NM_001005740, intron 2 of 12) -104980 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-57 chr9 80166387 80166647 + 0.47592484417103 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 1483 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-3 chr1 129543001 129543222 + 0.47592484417103 NA intron (NM_172485, intron 2 of 27) intron (NM_172485, intron 2 of 27) 269807 NM_172485 210417 Mm.380518 NM_172485 ENSMUSG00000042581 Thsd7b 1700074E13Rik|B930082A18|D130067I03Rik thrombospondin, type I, domain containing 7B protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-33 chr2 102934556 102934850 + 0.47592484417103 NA Intergenic Intergenic -33038 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-11 chr12 31948487 31948698 + 0.47592484417103 NA intron (NM_177993, intron 1 of 8) intron (NM_177993, intron 1 of 8) 1653 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-34 chr2 146985622 146985852 + 0.47592484417103 NA Intergenic Intergenic -27262 NM_001356403 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-52 chr7 29257649 29257955 + 0.47592484417103 NA intron (NM_001082548, intron 5 of 5) intron (NM_001082548, intron 5 of 5) -9335 NM_028179 72275 Mm.441142 NM_028179 ENSMUSG00000030587 2200002D01Rik 2010005J02Rik|H2RSP|IMUP|IMUP-1|IMUP-2 RIKEN cDNA 2200002D01 gene protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-4 chr11 53891309 53891524 + 0.47592484417103 NA exon (NM_011396, exon 1 of 10) exon (NM_011396, exon 1 of 10) 287 NM_011396 20520 Mm.42253 NM_011396 ENSMUSG00000018900 Slc22a5 Lstpl|Octn2|jvs solute carrier family 22 (organic cation transporter), member 5 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-22 chr15 36489506 36489776 + 0.47592484417103 NA intron (NM_001358007, intron 2 of 4) intron (NM_001358007, intron 2 of 4) 7093 NM_001358007 68839 Mm.396537 NM_175134 ENSMUSG00000048307 Ankrd46 1110054N06Rik|AI314978|AI987733 ankyrin repeat domain 46 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-40 chr2 167064732 167064991 + 0.47592484417103 NA promoter-TSS (NR_028540) promoter-TSS (NR_028540) -432 NR_028540 100217443 NR_028540 Snord12 MBII-99 small nucleolar RNA, C/D box 12 snoRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-59 chr9 71356718 71357073 + 0.47592484417103 NA Intergenic Intergenic 128063 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-7 chr8 94311654 94311855 + 0.47592484417103 NA intron (NM_001357268, intron 19 of 20) intron (NM_001357268, intron 19 of 20) -12557 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-37 chr3 116835879 116836073 + 0.47592484417103 NA Intergenic Intergenic -23591 NM_001113478 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-5 chr13 42382375 42382637 + 0.47592484417103 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 81030 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak2_14_8_0.467662523330061_3.40375626310734_0.47592484417103-4 chr5 16470373 16470602 + 0.47592484417103 NA Intergenic Intergenic -83008 NM_001289460 15234 Mm.267078 NM_010427 ENSMUSG00000028864 Hgf C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF hepatocyte growth factor protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-15 chr13 32371166 32371376 + 0.47592484417103 NA Intergenic Intergenic -32727 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-41 chr3 142316711 142316999 + 0.47592484417103 NA intron (NM_001190857, intron 2 of 7) intron (NM_001190857, intron 2 of 7) 74995 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-3 chr14 32014800 32015026 + 0.47592484417103 NA Intergenic Intergenic -14190 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-53 chr7 133102905 133103135 + 0.47592484417103 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 20463 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-58 chr9 108662467 108662674 + 0.47592484417103 NA intron (NM_020520, intron 1 of 8) intron (NM_020520, intron 1 of 8) 472 NM_020520 57279 Mm.29666 NM_020520 ENSMUSG00000032602 Slc25a20 1110007P09Rik|C78826|Cact|mCAC solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-26 chr19 4257965 4258167 + 0.47592484417103 NA Intergenic L3|LINE|CR1 5812 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-30 chr19 56941449 56941683 + 0.47592484417103 NA intron (NM_001177796, intron 5 of 19) intron (NM_001177796, intron 5 of 19) 67009 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-17 chr5 121170659 121170851 + 0.47592484417103 NA intron (NM_011202, intron 2 of 15) intron (NM_011202, intron 2 of 15) 20642 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-55 chr9 32669997 32670293 + 0.47592484417103 NA Intergenic Intergenic -25897 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-31 chr18 78133019 78133269 + 0.47592484417103 NA intron (NM_001171011, intron 1 of 8) intron (NM_001171011, intron 1 of 8) 8975 NM_001171011 108052 Mm.33832 NM_028122 ENSMUSG00000059336 Slc14a1 2610507K20Rik|3021401A05Rik|UT-B|Utb1 solute carrier family 14 (urea transporter), member 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-19 chr16 20726196 20726393 + 0.47592484417103 NA intron (NM_009379, intron 5 of 5) intron (NM_009379, intron 5 of 5) 4304 NM_001289896 21832 Mm.3943 NM_009379 ENSMUSG00000022847 Thpo Mgdf|Ml|Mpllg|Tpo thrombopoietin protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-8 chr10 41810304 41810494 + 0.47592484417103 NA promoter-TSS (NM_001243075) promoter-TSS (NM_001243075) -175 NM_001162908 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-33 chr2 137690903 137691115 + 0.47592484417103 NA Intergenic Intergenic -565575 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-51 chr6 147090973 147091259 + 0.47592484417103 NA promoter-TSS (NM_001081237) promoter-TSS (NM_001081237) 41 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-47 chr6 72476036 72476294 + 0.47592484417103 NA Intergenic Intergenic -36607 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-12 chr3 105800131 105800391 + 0.47592484417103 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 1120 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein 1a protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-28 chr17 56025891 56026190 + 0.47592484417103 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 10597 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-49 chr6 82831330 82831571 + 0.47592484417103 NA Intergenic Intergenic 50403 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak2_13_8_0.368829071922857_3.35433953740374_0.47592484417103-6 chr3 87931144 87931375 + 0.47592484417103 NA intron (NM_177663, intron 1 of 3) intron (NM_177663, intron 1 of 3) 945 NM_177663 229504 Mm.45744 NM_177663 ENSMUSG00000048039 Isg20l2 4930429N24|C80587 interferon stimulated exonuclease gene 20-like 2 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-43 chr5 51552701 51552893 + 0.47592484417103 NA intron (NR_132764, intron 1 of 12) intron (NR_132764, intron 1 of 12) 1124 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-18 chr14 120278868 120279180 + 0.47592484417103 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) 3355 NM_001360380 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-2 chr12 104916709 104916931 + 0.47592484417103 NA Intergenic Intergenic -51744 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-5 chr1 180943678 180943963 + 0.47592484417103 NA intron (NM_144794, intron 1 of 22) PB1D9|SINE|Alu 1302 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-44 chr5 66498089 66498331 + 0.47592484417103 NA intron (NM_001310626, intron 2 of 15) intron (NM_001310626, intron 2 of 15) 120607 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_13_8_0.368829071922857_3.35433953740374_0.47592484417103-63 chr9 119340372 119340577 + 0.47592484417103 NA promoter-TSS (NM_130864) promoter-TSS (NM_130864) -434 NM_010851 17874 Mm.213003 NM_010851 ENSMUSG00000032508 Myd88 - myeloid differentiation primary response gene 88 protein-coding unique_peak1_14_8_0.467662523330061_3.40375626310734_0.47592484417103-24 chr16 55559458 55559696 + 0.47592484417103 NA Intergenic Intergenic 64846 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-19 chr9 104321852 104322065 + 0.475924844171029 NA intron (NM_207668, intron 4 of 10) intron (NM_207668, intron 4 of 10) 15764 NM_019807 56318 Mm.19941 NM_019807 ENSMUSG00000032561 Acpp 5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal acid phosphatase, prostate protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-11 chr15 71529268 71529468 + 0.475924844171029 NA intron (NM_177819, intron 4 of 19) intron (NM_177819, intron 4 of 19) 198470 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-6 chr16 86302315 86302520 + 0.475924844171029 NA Intergenic Intergenic -401292 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-4 chr18 10469057 10469306 + 0.475924844171029 NA intron (NM_001083628, intron 4 of 32) intron (NM_001083628, intron 4 of 32) 141171 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-46 chr8 126659615 126659839 + 0.475924844171029 NA Intergenic Intergenic -66291 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-22 chr2 52966030 52966243 + 0.475924844171029 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 108268 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-31 chr4 135307760 135307963 + 0.475924844171029 NA Intergenic Intergenic -35101 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-41 chr7 98493326 98493557 + 0.475924844171029 NA promoter-TSS (NM_001113379) promoter-TSS (NM_001113379) -781 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-34 chr5 118477354 118477736 + 0.475924844171029 NA Intergenic MLT1K|LTR|ERVL-MaLR -83174 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-45 chr8 122559304 122559551 + 0.475924844171029 NA Intergenic Intergenic -8098 NM_001357349 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-23 chr2 59171195 59171600 + 0.475924844171029 NA intron (NM_175464, intron 1 of 20) B1_Mur4|SINE|Alu 10547 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding common_peak1_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-3 chr13 92355365 92355621 + 0.475924844171029 NA promoter-TSS (NM_010829) promoter-TSS (NM_010829) -490 NM_010829 17686 Mm.343101 NM_010829 ENSMUSG00000014850 Msh3 D13Em1|Rep-3|Rep3 mutS homolog 3 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-20 chrX 7739754 7739978 + 0.475924844171029 NA intron (NM_207202, intron 1 of 9) intron (NM_207202, intron 1 of 9) 1458 NM_207202 54648 Mm.63342 NM_207202 ENSMUSG00000031150 Ccdc120 AA030924|DXImx50e|Jm11|Sfc25 coiled-coil domain containing 120 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-30 chr4 107719765 107720027 + 0.475924844171029 NA Intergenic Intergenic -35734 NM_019872 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-28 chr4 49631682 49631886 + 0.475924844171029 NA promoter-TSS (NM_001163263) promoter-TSS (NM_001163263) -276 NM_001163263 109331 Mm.24765 NM_182999 ENSMUSG00000028309 Rnf20 4833430L21Rik|AW540162|C79397|mKIAA4116 ring finger protein 20 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-16 chr6 37355728 37355939 + 0.475924844171029 NA intron (NM_178661, intron 5 of 11) intron (NM_178661, intron 5 of 11) -55857 NM_001347104 320127 Mm.119469 NM_001081206 ENSMUSG00000038665 Dgki 6430604M11Rik|C130010K08Rik diacylglycerol kinase, iota protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-40 chr7 49478223 49478439 + 0.475924844171029 NA intron (NM_175272, intron 10 of 37) intron (NM_175272, intron 10 of 37) 158504 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-10 chr3 15216849 15217141 + 0.475924844171029 NA Intergenic Intergenic 115307 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-26 chr3 86110568 86110846 + 0.475924844171029 NA intron (NM_001082414, intron 7 of 14) intron (NM_001082414, intron 7 of 14) 26273 NM_001082414 27059 Mm.2454 NM_012059 ENSMUSG00000028082 Sh3d19 AW011754|Kryn SH3 domain protein D19 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-49 chr9 72535451 72535764 + 0.475924844171029 NA intron (NM_001033536, intron 1 of 8) intron (NM_001033536, intron 1 of 8) 3367 NM_001033536 319758 Mm.32081 NM_001033536 ENSMUSG00000037674 Rfx7 2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2 regulatory factor X, 7 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-43 chr7 144946557 144946853 + 0.475924844171029 NA Intergenic Intergenic -6780 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-2 chr1 90288711 90289032 + 0.475924844171029 NA Intergenic Intergenic 84891 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-38 chr6 129181666 129181951 + 0.475924844171029 NA intron (NM_053109, intron 1 of 4) intron (NM_053109, intron 1 of 4) 1193 NM_053109 93694 Mm.197536 NM_053109 ENSMUSG00000030157 Clec2d Clr-b|Clrb|Ocil C-type lectin domain family 2, member d protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-20 chr19 55621767 55622102 + 0.475924844171029 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 80270 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-2 chr12 64964917 64965129 + 0.475924844171029 NA promoter-TSS (NM_177805) promoter-TSS (NM_177805) 513 NM_025707 66689 Mm.248678 NM_025707 ENSMUSG00000020948 Klhl28 2810440N09Rik|4122402F11Rik|4931401E10Rik|Btbd5 kelch-like 28 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-29 chr4 55650775 55651020 + 0.475924844171029 NA Intergenic Intergenic -118422 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-17 chr7 24547145 24547346 + 0.475924844171029 NA 5' UTR (NM_009532, exon 2 of 18) 5' UTR (NM_009532, exon 2 of 18) 546 NM_001360170 22594 Mm.4347 NM_009532 ENSMUSG00000051768 Xrcc1 Xrcc-1 X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-33 chr5 35006742 35007041 + 0.475924844171029 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 7813 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-8 chr17 55959848 55960057 + 0.475924844171029 NA promoter-TSS (NR_108021) promoter-TSS (NR_108021) -551 NR_108021 100504333 Mm.391908 NR_108021 ENSMUSG00000097077 Gm16712 - predicted gene, 16712 ncRNA unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-27 chr3 122096931 122097247 + 0.475924844171029 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 52629 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-21 chr19 57235823 57236107 + 0.475924844171029 NA Intergenic Intergenic -19933 NM_178688 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_9_12_-0.643687795596174_3.37859582034301_0.475924844171029 chr1 72779787 72779977 + 0.475924844171029 NA Intergenic Intergenic -44598 NM_008342 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-36 chr5 149524229 149524509 + 0.475924844171029 NA intron (NR_045423, intron 1 of 4) intron (NR_045423, intron 1 of 4) -4310 NM_029440 381693 Mm.136919 NM_029440 ENSMUSG00000029658 Wdr95 4930434E21Rik WD40 repeat domain 95 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-47 chr9 44512192 44512491 + 0.475924844171029 NA TTS (NM_030256) TTS (NM_030256) 13205 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-7 chr11 69326414 69326716 + 0.475924844171029 NA TTS (NM_001024206) TTS (NM_001024206) 307 NM_010599 16499 Mm.232472 NM_010599 ENSMUSG00000018470 Kcnab3 C330022D06Rik|Kcnab4|mKv(beta)4 potassium voltage-gated channel, shaker-related subfamily, beta member 3 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-9 chr2 167833451 167833661 + 0.475924844171029 NA Intergenic Intergenic -98771 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-14 chr17 30097681 30098061 + 0.475924844171029 NA intron (NM_001356265, intron 2 of 5) intron (NM_001356265, intron 2 of 5) 92832 NM_001356265 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-24 chr2 118763842 118764047 + 0.475924844171029 NA Intergenic Intergenic -1283 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-42 chr7 140955453 140955692 + 0.475924844171029 NA intron (NM_030694, intron 1 of 1) intron (NM_030694, intron 1 of 1) 389 NM_030694 80876 Mm.379266 NM_030694 ENSMUSG00000060591 Ifitm2 DSPA2c|Ifitm3l|fragilis3|mil-3 interferon induced transmembrane protein 2 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-14 chr4 150057920 150058123 + 0.475924844171029 NA Intergenic Intergenic -10433 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-35 chr5 135877548 135877837 + 0.475924844171029 NA Intergenic Intergenic -10227 NM_013560 15507 Mm.13849 NM_013560 ENSMUSG00000004951 Hspb1 27kDa|Hsp25 heat shock protein 1 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-7 chr17 29169750 29169952 + 0.475924844171029 NA intron (NM_001360239, intron 13 of 21) intron (NM_001360239, intron 13 of 21) 34795 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-3 chr1 113288618 113288850 + 0.475924844171029 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -1423816 NM_001081316 319901 Mm.103468 NM_001081316 ENSMUSG00000038702 Dsel 9330132E09Rik|DS-epi2 dermatan sulfate epimerase-like protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-8 chr11 83919856 83920121 + 0.475924844171029 NA Intergenic Intergenic -22102 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-15 chr5 100500054 100500326 + 0.475924844171029 NA intron (NM_001359914, intron 1 of 13) CpG 449 NM_172714 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-15 chr17 80758522 80758901 + 0.475924844171029 NA Intergenic Intergenic -30686 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-25 chr2 163798190 163798422 + 0.475924844171029 NA Intergenic Intergenic -22528 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-16 chr18 36509471 36509698 + 0.475924844171029 NA intron (NM_010415, intron 3 of 5) intron (NM_010415, intron 3 of 5) 6221 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-4 chr10 24407915 24408193 + 0.475924844171029 NA Intergenic Intergenic 184537 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-3 chr13 60873643 60873948 + 0.475924844171029 NA Intergenic Intergenic -9379 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-39 chr7 16364666 16364944 + 0.475924844171029 NA intron (NM_019748, intron 5 of 8) B1_Mur1|SINE|Alu 23091 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak1_9_12_-0.643687795596174_3.37859582034301_0.475924844171029 chr5 115520422 115520712 + 0.475924844171029 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 13891 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-19 chr19 28176522 28176731 + 0.475924844171029 NA Intergenic Intergenic -165460 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-9 chr13 104290581 104290862 + 0.475924844171029 NA intron (NR_136938, intron 1 of 26) intron (NR_136938, intron 1 of 26) 2886 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-44 chr8 31402988 31403214 + 0.475924844171029 NA Intergenic Intergenic 35352 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-2 chr12 79864588 79864825 + 0.475924844171029 NA Intergenic Intergenic 60027 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-4 chr14 20894875 20895152 + 0.475924844171029 NA Intergenic A-rich|Low_complexity|Low_complexity -34385 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-17 chr18 38634656 38634914 + 0.475924844171029 NA Intergenic Intergenic -33517 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-37 chr6 54019804 54020034 + 0.475924844171029 NA Intergenic Intergenic -20013 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-5 chr10 79946443 79946696 + 0.475924844171029 NA intron (NM_001288625, intron 4 of 8) intron (NM_001288625, intron 4 of 8) -13583 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-11 chr3 41287725 41287969 + 0.475924844171029 NA Intergenic Intergenic -204801 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-18 chr18 46650373 46650637 + 0.475924844171029 NA Intergenic Intergenic 52801 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029 chr1 44591870 44592089 + 0.475924844171029 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 40308 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-48 chr9 69458347 69458602 + 0.475924844171029 NA intron (NM_007585, intron 1 of 12) intron (NM_007585, intron 1 of 12) 1530 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-12 chr4 54772217 54772443 + 0.475924844171029 NA Intergenic Intergenic -175615 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-12 chr15 85660009 85660386 + 0.475924844171029 NA Intergenic Intergenic -43576 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-5 chr16 32246091 32246320 + 0.475924844171029 NA intron (NM_173439, intron 1 of 2) intron (NM_173439, intron 1 of 2) 820 NM_173439 268882 Mm.256137 NM_173439 ENSMUSG00000035764 Fbxo45 2610017J04Rik|AI463119|BC026799 F-box protein 45 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-10 chr15 25558866 25559070 + 0.475924844171029 NA Intergenic Intergenic -63582 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-50 chrX 159841056 159841277 + 0.475924844171029 NA intron (NM_001135728, intron 1 of 12) intron (NM_001135728, intron 1 of 12) 698 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029 chr10 77127820 77128131 + 0.475924844171029 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -14270 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-13 chr4 107552100 107552303 + 0.475924844171029 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 117482 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-6 chr11 5857030 5857242 + 0.475924844171029 NA Intergenic Intergenic -4730 NM_009636 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-13 chr16 57752728 57753094 + 0.475924844171029 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 1826 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding unique_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-32 chr5 13402269 13402630 + 0.475924844171029 NA intron (NM_001243073, intron 2 of 17) intron (NM_001243073, intron 2 of 17) 3140 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak2_9_12_-0.643687795596174_3.37859582034301_0.475924844171029-18 chr8 122987039 122987376 + 0.475924844171029 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 55077 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382-4 chr7 80787231 80787554 + 0.475844607239382 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 15939 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_40_27_0.270659625116078_4.94268473461564_0.475844607239382-5 chr5 24825632 24826263 + 0.475844607239382 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 16414 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382 chr18 31634405 31634772 + 0.475844607239382 NA promoter-TSS (NM_001357555) promoter-TSS (NM_001357555) 220 NM_172965 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding common_peak2_40_27_0.270659625116078_4.94268473461564_0.475844607239382-3 chr15 36791362 36791842 + 0.475844607239382 NA promoter-TSS (NM_001253807) promoter-TSS (NM_001253807) -670 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382-2 chr5 100567701 100568367 + 0.475844607239382 NA intron (NM_139198, intron 1 of 4) intron (NM_139198, intron 1 of 4) 4171 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak2_40_27_0.270659625116078_4.94268473461564_0.475844607239382-2 chr10 43693470 43693782 + 0.475844607239382 NA Intergenic Intergenic -52532 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382-3 chr5 122779598 122780210 + 0.475844607239382 NA promoter-TSS (NM_145358) promoter-TSS (NM_145358) -494 NM_145358 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding common_peak2_40_27_0.270659625116078_4.94268473461564_0.475844607239382 chr1 132318285 132318685 + 0.475844607239382 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 2360 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_40_27_0.270659625116078_4.94268473461564_0.475844607239382-4 chr3 94838334 94838777 + 0.475844607239382 NA intron (NM_001165948, intron 1 of 18) intron (NM_001165948, intron 1 of 18) 988 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382-5 chr8 90869507 90869899 + 0.475844607239382 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 40868 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382-6 chr9 77545013 77545481 + 0.475844607239382 NA promoter-TSS (NM_001146048) promoter-TSS (NM_001146048) -395 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak1_40_27_0.270659625116078_4.94268473461564_0.475844607239382-7 chr9 88273548 88274111 + 0.475844607239382 NA Intergenic (TGG)n|Simple_repeat|Simple_repeat -53780 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding unique_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-2 chr11 23632930 23633504 + 0.475844607239376 NA intron (NM_027860, intron 1 of 21) CpG 414 NM_001347242 71675 Mm.48031 NM_027860 ENSMUSG00000042208 0610010F05Rik Kiaa1841|mKIAA1841 RIKEN cDNA 0610010F05 gene protein-coding unique_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376 chr1 161130759 161131297 + 0.475844607239376 NA intron (NM_001039482, intron 1 of 11) intron (NM_001039482, intron 1 of 11) 451 NM_001039482 226541 Mm.255165 NM_144876 ENSMUSG00000026705 Klhl20 AI504637|D930050H05Rik|Kleip|mKIAA4210 kelch-like 20 protein-coding common_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-2 chr6 29272716 29273085 + 0.475844607239376 NA intron (NM_023516, intron 1 of 1) CpG 274 NM_023516 69573 Mm.45161 NM_023516 ENSMUSG00000043421 Hilpda 2310016C08Rik|AW049004|Hig2 hypoxia inducible lipid droplet associated protein-coding common_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376 chr12 26339268 26339956 + 0.475844607239376 NA intron (NM_080563, intron 2 of 8) intron (NM_080563, intron 2 of 8) -7098 NR_130981 75243 Mm.444753 NR_130981 ENSMUSG00000114048 4930549C15Rik - RIKEN cDNA 4930549C15 gene ncRNA common_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-5 chr8 60632264 60632605 + 0.475844607239376 NA promoter-TSS (NM_027756) promoter-TSS (NM_027756) -391 NM_027756 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-3 chr3 88592794 88593236 + 0.475844607239376 NA Intergenic Intergenic 13407 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-4 chr6 38876269 38876796 + 0.475844607239376 NA promoter-TSS (NM_001294144) promoter-TSS (NM_001294144) -342 NM_001294143 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak1_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-2 chr19 44794082 44794696 + 0.475844607239376 NA intron (NM_011037, intron 5 of 9) intron (NM_011037, intron 5 of 9) -14017 NR_105831 102466645 NR_105831 ENSMUSG00000098952 Mir6405 Gm27349|mmu-mir-6405 microRNA 6405 ncRNA common_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-3 chr6 31078958 31079431 + 0.475844607239376 NA Intergenic Intergenic -16101 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-6 chr9 44728121 44728607 + 0.475844607239376 NA intron (NM_153537, intron 1 of 21) intron (NM_153537, intron 1 of 21) 6834 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_32_34_-0.362217032547208_4.94817450067136_0.475844607239376 chr11 115765548 115766055 + 0.475844607239376 NA intron (NM_028014, intron 1 of 31) CpG 368 NM_028014 71947 Mm.23168 NM_028014 ENSMUSG00000020747 Tmem94 2310067B10Rik|Kiaa0195|mKIAA0195 transmembrane protein 94 protein-coding common_peak1_32_34_-0.362217032547208_4.94817450067136_0.475844607239376-4 chr8 60757087 60757488 + 0.475844607239376 NA Intergenic Intergenic 101730 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_157_115_0.152531691574461_6.9342468409148_0.47555558029382 chr1 33813250 33814459 + 0.47555558029382 NA intron (NM_001359274, intron 1 of 13) intron (NM_001359274, intron 1 of 13) 741 NM_133817 98403 Mm.289103 NM_133817 ENSMUSG00000042197 Zfp451 4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702 zinc finger protein 451 protein-coding common_peak1_140_129_-0.174925887072189_6.93490486949236_0.47555558029382 chr8 8689523 8690560 + 0.47555558029382 NA TTS (NR_106114) TTS (NR_106114) 121 NR_106114 102465762 NR_106114 ENSMUSG00000098917 Mir7654 Gm27748|mmu-mir-7654 microRNA 7654 ncRNA common_peak2_293_259_-0.122284026581434_7.96122579973774_0.475492365636497 chr7 28922873 28925309 + 0.475492365636497 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 38241 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_55_55_-0.282710807838924_5.66599951813814_0.475408985215012-2 chr1 134494307 134495241 + 0.475408985215012 NA exon (NM_145510, exon 1 of 2) exon (NM_145510, exon 1 of 2) 114 NM_145510 98710 Mm.198119 NM_145510 ENSMUSG00000042229 Rabif AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3 RAB interacting factor protein-coding common_peak1_66_46_0.22696416596275_5.66807093465901_0.475408985215012 chr11 53762115 53763008 + 0.475408985215012 NA Intergenic ID_B1|SINE|B4 1093 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak1_66_46_0.22696416596275_5.66807093465901_0.475408985215012-3 chr4 43393976 43394548 + 0.475408985215012 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -12240 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_55_55_-0.282710807838924_5.66599951813814_0.475408985215012 chr18 74268278 74268847 + 0.475408985215012 NA intron (NM_001357422, intron 1 of 14) intron (NM_001357422, intron 1 of 14) 387 NM_001357422 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak1_66_46_0.22696416596275_5.66807093465901_0.475408985215012-4 chr8 70647678 70648256 + 0.475408985215012 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 11771 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_55_55_-0.282710807838924_5.66599951813814_0.475408985215012-4 chr2 170245143 170245994 + 0.475408985215012 NA Intergenic B3A|SINE|B2 -102893 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_55_55_-0.282710807838924_5.66599951813814_0.475408985215012-2 chr19 46075988 46076546 + 0.475408985215012 NA intron (NM_001039351, intron 1 of 12) intron (NM_001039351, intron 1 of 12) 420 NM_001039351 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_66_46_0.22696416596275_5.66807093465901_0.475408985215012 chr8 94917785 94918183 + 0.475408985215012 NA 5' UTR (NM_001033533, exon 1 of 9) 5' UTR (NM_001033533, exon 1 of 9) 114 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding common_peak2_55_55_-0.282710807838924_5.66599951813814_0.475408985215012-3 chr2 132605584 132606548 + 0.475408985215012 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 7870 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA common_peak2_55_55_-0.282710807838924_5.66599951813814_0.475408985215012-6 chr6 38532823 38533357 + 0.475408985215012 NA Intergenic Intergenic -1771 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak2_55_55_-0.282710807838924_5.66599951813814_0.475408985215012-5 chr6 13069828 13070476 + 0.475408985215012 NA intron (NM_027992, intron 1 of 8) intron (NM_027992, intron 1 of 8) 393 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding common_peak1_66_46_0.22696416596275_5.66807093465901_0.475408985215012-2 chr2 119675111 119675649 + 0.475408985215012 NA intron (NM_030112, intron 1 of 17) CpG 312 NM_030112 76246 Mm.33437 NM_030112 ENSMUSG00000027304 Rtf1 2900005O08Rik|6530416A09Rik|AI853581|AU043144|AW553985|Gtl7|cbp82 RTF1, Paf1/RNA polymerase II complex component protein-coding common_peak2_55_55_-0.282710807838924_5.66599951813814_0.475408985215012 chr1 90050514 90051166 + 0.475408985215012 NA intron (NM_029122, intron 16 of 18) intron (NM_029122, intron 16 of 18) -36174 NM_139152 208372 Mm.215164 NM_139152 ENSMUSG00000067081 Asb18 Asb-18 ankyrin repeat and SOCS box-containing 18 protein-coding common_peak2_85_81_-0.218364453981895_6.24836977762714_0.475189629825186 chr12 54984957 54986328 + 0.475189629825186 NA intron (NM_013815, intron 2 of 26) CpG 694 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak2_85_81_-0.218364453981895_6.24836977762714_0.475189629825186-2 chr13 45871933 45873023 + 0.475189629825186 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 92513 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_98_70_0.191099487547286_6.24529686327833_0.475189629825186 chr6 72389607 72390698 + 0.475189629825186 NA intron (NM_016794, intron 1 of 2) intron (NM_016794, intron 1 of 2) 515 NM_016794 22320 Mm.1838 NM_016794 ENSMUSG00000050732 Vamp8 AU041171|Edb|endobrevin vesicle-associated membrane protein 8 protein-coding common_peak2_85_81_-0.218364453981895_6.24836977762714_0.475189629825186-3 chr13 114458329 114459673 + 0.475189629825186 NA promoter-TSS (NM_001301373) promoter-TSS (NM_001301373) -50 NM_008046 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding common_peak1_120_112_-0.191868201438863_6.72424486169576_0.475063817168609 chr11 19019017 19020345 + 0.475063817168609 NA promoter-TSS (NM_001193271) promoter-TSS (NM_001193271) -712 NM_010789 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-5 chr15 41710218 41710991 + 0.475038482441584 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -78391 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_53_36_0.263093485271209_5.34100010826455_0.475038482441584-3 chr5 13399438 13400243 + 0.475038482441584 NA 5' UTR (NM_009152, exon 1 of 17) 5' UTR (NM_009152, exon 1 of 17) 531 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-11 chr8 128687836 128688364 + 0.475038482441584 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 2446 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_52_36_0.23631668964091_5.32761171044941_0.475038482441584-5 chr7 98178416 98178903 + 0.475038482441584 NA promoter-TSS (NM_007602) promoter-TSS (NM_007602) -385 NM_007602 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding common_peak1_53_36_0.263093485271209_5.34100010826455_0.475038482441584-6 chrX 75764152 75764898 + 0.475038482441584 NA intron (NR_029443, intron 1 of 8) intron (NR_029443, intron 1 of 8) 174 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik|Dxz4 RIKEN cDNA 4933407K13 gene ncRNA common_peak1_53_36_0.263093485271209_5.34100010826455_0.475038482441584-2 chr4 123917574 123918172 + 0.475038482441584 NA intron (NM_017475, intron 1 of 6) CpG 440 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-4 chr10 93188818 93189365 + 0.475038482441584 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 26306 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_53_36_0.263093485271209_5.34100010826455_0.475038482441584 chr18 12955369 12956065 + 0.475038482441584 NA Intergenic Intergenic -13876 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_52_36_0.23631668964091_5.32761171044941_0.475038482441584-4 chr7 5060452 5061031 + 0.475038482441584 NA TTS (NM_001290432) TTS (NM_001290432) -1402 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-8 chr4 149997806 149998487 + 0.475038482441584 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 5090 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_52_36_0.23631668964091_5.32761171044941_0.475038482441584 chr1 40270842 40271316 + 0.475038482441584 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 4493 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-6 chr4 32180082 32180507 + 0.475038482441584 NA Intergenic Intergenic 216187 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_52_36_0.23631668964091_5.32761171044941_0.475038482441584-2 chr11 116142918 116143508 + 0.475038482441584 NA 3' UTR (NM_172571, exon 31 of 31) 3' UTR (NM_172571, exon 31 of 31) -4345 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-10 chr7 19228379 19228716 + 0.475038482441584 NA exon (NM_207525, exon 1 of 2) exon (NM_207525, exon 1 of 2) 158 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak2_52_36_0.23631668964091_5.32761171044941_0.475038482441584-5 chr4 45454524 45454961 + 0.475038482441584 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -45976 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_53_36_0.263093485271209_5.34100010826455_0.475038482441584-4 chr4 11486007 11486454 + 0.475038482441584 NA intron (NM_001081183, intron 1 of 24) CpG 272 NM_001347055 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 Virma 1110037F02Rik|4930422M05Rik|Kiaa1429|mKIAA1429 vir like m6A methyltransferase associated protein-coding common_peak2_52_36_0.23631668964091_5.32761171044941_0.475038482441584-6 chr9 35421642 35422222 + 0.475038482441584 NA Intergenic CpG -30144 NM_021339 57810 Mm.80509 NM_021339 ENSMUSG00000038119 Cdon CDO|Cd0|Orcam cell adhesion molecule-related/down-regulated by oncogenes protein-coding common_peak1_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-2 chr6 87042143 87042652 + 0.475038482441584 NA promoter-TSS (NM_013528) promoter-TSS (NM_013528) -449 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak2_52_36_0.23631668964091_5.32761171044941_0.475038482441584-2 chr10 122046710 122047149 + 0.475038482441584 NA intron (NM_001081037, intron 1 of 21) intron (NM_001081037, intron 1 of 21) 386 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-9 chr5 124352783 124353442 + 0.475038482441584 NA intron (NM_013812, intron 1 of 3) intron (NM_013812, intron 1 of 3) 1516 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak2_53_36_0.263093485271209_5.34100010826455_0.475038482441584-3 chr3 108839866 108840424 + 0.475038482441584 NA intron (NM_011504, intron 1 of 18) CpG 357 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding common_peak2_52_36_0.23631668964091_5.32761171044941_0.475038482441584-3 chr15 102135698 102136182 + 0.475038482441584 NA intron (NM_001033277, intron 1 of 10) CpG 275 NM_001033277 223918 Mm.385009 NM_001033277 ENSMUSG00000036966 Spryd3 BC008150 SPRY domain containing 3 protein-coding common_peak2_53_36_0.263093485271209_5.34100010826455_0.475038482441584-2 chr2 121871569 121872367 + 0.475038482441584 NA intron (NM_001205371, intron 1 of 9) intron (NM_001205371, intron 1 of 9) 4263 NM_001205371 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-3 chr10 17108203 17108956 + 0.475038482441584 NA Intergenic Intergenic -12797 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_52_36_0.23631668964091_5.32761171044941_0.475038482441584-4 chr19 4037401 4037960 + 0.475038482441584 NA intron (NM_013541, intron 1 of 6) intron (NM_013541, intron 1 of 6) 232 NM_013541 14870 Mm.299292 NM_013541 ENSMUSG00000060803 Gstp1 GstpiB glutathione S-transferase, pi 1 protein-coding common_peak1_43_44_-0.312677693732614_5.33551424946337_0.475038482441584 chr13 64161930 64162547 + 0.475038482441584 NA exon (NM_019986, exon 1 of 8) exon (NM_019986, exon 1 of 8) 372 NM_019986 56541 Mm.40989 NM_019986 ENSMUSG00000021476 Habp4 4933413D03Rik|4933428J01Rik hyaluronic acid binding protein 4 protein-coding common_peak1_53_36_0.263093485271209_5.34100010826455_0.475038482441584 chr1 89454800 89455320 + 0.475038482441584 NA 5' UTR (NM_178119, exon 1 of 18) 5' UTR (NM_178119, exon 1 of 18) 249 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584 chr1 55052055 55052431 + 0.475038482441584 NA promoter-TSS (NM_026424) promoter-TSS (NM_026424) -527 NM_026424 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding common_peak1_52_36_0.23631668964091_5.32761171044941_0.475038482441584-3 chr15 10664904 10665296 + 0.475038482441584 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 48440 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_52_36_0.23631668964091_5.32761171044941_0.475038482441584 chr1 135728617 135729552 + 0.475038482441584 NA promoter-TSS (NR_153810) promoter-TSS (NR_153810) -83 NR_153810 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-2 chr1 153333230 153333736 + 0.475038482441584 NA promoter-TSS (NM_010683) promoter-TSS (NM_010683) -697 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak1_53_36_0.263093485271209_5.34100010826455_0.475038482441584-4 chr5 25497864 25498583 + 0.475038482441584 NA intron (NM_001081383, intron 1 of 58) CpG 560 NM_001081383 231051 Mm.332268 NM_001081383 ENSMUSG00000038056 Kmt2c E330008K23Rik|HALR|Mll3|mKIAA1506 lysine (K)-specific methyltransferase 2C protein-coding common_peak2_53_36_0.263093485271209_5.34100010826455_0.475038482441584-5 chr7 111083252 111083718 + 0.475038482441584 NA promoter-TSS (NM_001040131) promoter-TSS (NM_001040131) -455 NM_013507 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak2_43_44_-0.312677693732614_5.33551424946337_0.475038482441584-7 chr4 59454370 59454782 + 0.475038482441584 NA Intergenic Intergenic -15943 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_53_36_0.263093485271209_5.34100010826455_0.475038482441584-5 chrX 18161815 18162402 + 0.475038482441584 NA promoter-TSS (NM_009483) promoter-TSS (NM_009483) -467 NM_009483 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak1_180_133_0.139105399600354_7.13564189025795_0.47498501099134 chr3 35931637 35933410 + 0.47498501099134 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) -189 NM_001205362 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak1_180_133_0.139105399600354_7.13564189025795_0.47498501099134-2 chr9 14613312 14615265 + 0.47498501099134 NA intron (NM_001081395, intron 1 of 12) intron (NM_001081395, intron 1 of 12) 712 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding common_peak2_117_84_0.182955169611733_6.50086852094357_0.474876697582089 chr10 62791549 62792243 + 0.474876697582089 NA intron (NM_026201, intron 1 of 24) CpG 472 NM_026201 67500 Mm.196371 NM_026201 ENSMUSG00000020074 Ccar1 2610511G16Rik|9430036H15Rik|Carp1 cell division cycle and apoptosis regulator 1 protein-coding common_peak1_117_84_0.182955169611733_6.50086852094357_0.474876697582089 chr7 3629121 3630390 + 0.474876697582089 NA promoter-TSS (NM_027328) promoter-TSS (NM_027328) 174 NM_023524 69714 Mm.358730 NM_023524 ENSMUSG00000006335 Tfpt 2400004F01Rik|AI450389|Amida|FB1 TCF3 (E2A) fusion partner protein-coding common_peak2_116_84_0.170763463199076_6.49477266773724_0.474876697582089 chr1 16105478 16106734 + 0.474876697582089 NA exon (NM_133832, exon 1 of 6) exon (NM_133832, exon 1 of 6) 224 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_117_84_0.182955169611733_6.50086852094357_0.474876697582089-2 chr8 24438186 24438915 + 0.474876697582089 NA 3' UTR (NM_026931, exon 1 of 1) 3' UTR (NM_026931, exon 1 of 1) 396 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_326_286_-0.112431418893031_8.10869121722917_0.474868707344224 chr11 8466187 8469496 + 0.474868707344224 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 196694 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_205_152_0.133144542792331_7.32396011408882_0.474820243318482 chr4 119126112 119127632 + 0.474820243318482 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 18127 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_141_130_-0.175857239403962_6.94549438183547_0.474135131783491 chr11 96271344 96272928 + 0.474135131783491 NA intron (NM_008270, intron 1 of 1) CpG 806 NM_008270 15417 Mm.258271 NM_008270 ENSMUSG00000020875 Hoxb9 Hox-2.5 homeobox B9 protein-coding common_peak1_70_68_-0.243903715071438_5.98657259924245_0.473550455187116 chr15 59759952 59760545 + 0.473550455187116 NA Intergenic Intergenic 34711 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_70_68_-0.243903715071438_5.98657259924245_0.473550455187116 chr13 69593848 69594909 + 0.473550455187116 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 17085 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_82_58_0.205680571529077_5.98548333512638_0.473550455187116-2 chr4 10874161 10875092 + 0.473550455187116 NA exon (NM_026005, exon 1 of 6) exon (NM_026005, exon 1 of 6) 128 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding common_peak1_82_58_0.205680571529077_5.98548333512638_0.473550455187116-2 chr16 23989688 23990601 + 0.473550455187116 NA Intergenic Intergenic -1292 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_82_58_0.205680571529077_5.98548333512638_0.473550455187116 chr11 88561563 88562605 + 0.473550455187116 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -57167 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_70_68_-0.243903715071438_5.98657259924245_0.473550455187116-2 chr6 38551471 38552533 + 0.473550455187116 NA intron (NM_001170848, intron 1 of 8) CpG 668 NM_001170849 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak2_82_58_0.205680571529077_5.98548333512638_0.473550455187116-3 chr4 137494478 137495184 + 0.473550455187116 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 26028 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_70_68_-0.243903715071438_5.98657259924245_0.473550455187116-2 chr15 74920850 74921926 + 0.473550455187116 NA Intergenic RSINE1|SINE|B4 -33663 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_82_58_0.205680571529077_5.98548333512638_0.473550455187116 chr10 96633208 96634212 + 0.473550455187116 NA Intergenic Intergenic 16709 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_239_213_-0.13209937992175_7.67541729644027_0.473526434039563 chr16 23224779 23227199 + 0.473526434039563 NA promoter-TSS (NM_001252505) promoter-TSS (NM_001252505) -32 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_322_242_0.110031804911533_7.97982840606155_0.473414334803311 chr9 44603766 44606097 + 0.473414334803311 NA promoter-TSS (NM_181324) promoter-TSS (NM_181324) 39 NM_181324 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak1_329_289_-0.114351145583029_8.12273351722342_0.472995225092286 chr1 132344781 132347351 + 0.472995225092286 NA Intergenic Intergenic 21882 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_118_85_0.17817017263524_6.51534984101972_0.472963502765614 chr8 105496189 105497085 + 0.472963502765614 NA intron (NM_175160, intron 1 of 13) CpG 265 NM_175160 70796 Mm.100917 NM_175160 ENSMUSG00000039199 Zdhhc1 4432412D04Rik|DHHC-1 zinc finger, DHHC domain containing 1 protein-coding common_peak2_86_82_-0.219290807742204_6.26539402747582_0.472909071679608 chr10 80162410 80163664 + 0.472909071679608 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -4802 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_99_71_0.185318881136752_6.26258444201069_0.472909071679608 chr8 104394776 104395671 + 0.472909071679608 NA intron (NM_153582, intron 1 of 3) CpG 584 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak1_99_71_0.185318881136752_6.26258444201069_0.472909071679608 chr12 87442967 87444289 + 0.472909071679608 NA promoter-TSS (NM_026958) promoter-TSS (NM_026958) 211 NM_001102565 211064 Mm.486235 NM_001102565 ENSMUSG00000079036 Alkbh1 2700073G19Rik|Abh|Alkbh|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding common_peak1_142_131_-0.17677556609732_6.95600633630979_0.472737630635625 chr8 79398148 79399445 + 0.472737630635625 NA intron (NM_008539, intron 1 of 6) CpG 672 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak1_160_117_0.154814322435298_6.96005021057949_0.472737630635625 chr17 86962651 86964045 + 0.472737630635625 NA 5' UTR (NM_145491, exon 1 of 5) 5' UTR (NM_145491, exon 1 of 5) 237 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_142_131_-0.17677556609732_6.95600633630979_0.472737630635625 chr5 111246796 111248618 + 0.472737630635625 NA intron (NM_001267622, intron 12 of 22) intron (NM_001267622, intron 12 of 22) -82990 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_595_510_-0.0847920435588421_8.9547834591582_0.472669158461215 chr12 76533456 76537820 + 0.472669158461215 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 2078 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding common_peak1_183_135_0.141280501399427_7.15810309195005_0.472541262651138 chr19 43675151 43676993 + 0.472541262651138 NA non-coding (NR_045645, exon 1 of 1) non-coding (NR_045645, exon 1 of 1) 894 NR_045645 100502982 Mm.313570 NR_045645 BC037704 - cDNA sequence BC037704 ncRNA common_peak2_183_135_0.141280501399427_7.15810309195005_0.472541262651138 chr4 63048867 63050460 + 0.472541262651138 NA intron (NM_028326, intron 1 of 14) LTR33A|LTR|ERVL 84089 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_214_192_-0.140667567451258_7.52212325354245_0.472087255011355 chr18 73572765 73574509 + 0.472087255011355 NA exon (NM_001039214, exon 1 of 2) exon (NM_001039214, exon 1 of 2) 932 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_56_56_-0.28289095739214_5.69144453546867_0.472014239747252 chr10 76468515 76469241 + 0.472014239747252 NA promoter-TSS (NM_019434) promoter-TSS (NM_019434) -93 NM_019434 54387 Mm.30098 NM_019434 ENSMUSG00000001150 Mcm3ap GANP|mKIAA0572 minichromosome maintenance complex component 3 associated protein protein-coding common_peak2_56_56_-0.28289095739214_5.69144453546867_0.472014239747252-5 chr9 121710362 121711158 + 0.472014239747252 NA intron (NM_026794, intron 2 of 2) CpG-15514 371 NM_026794 26901 Mm.24848 NM_026794 ENSMUSG00000032526 Ss18l2 1110020I04Rik|AI463209|Deb1 SS18, nBAF chromatin remodeling complex subunit like 2 protein-coding common_peak1_56_56_-0.28289095739214_5.69144453546867_0.472014239747252 chr4 32100224 32100933 + 0.472014239747252 NA Intergenic Intergenic 136471 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_56_56_-0.28289095739214_5.69144453546867_0.472014239747252-2 chr11 31381598 31382087 + 0.472014239747252 NA Intergenic Intergenic -11781 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_67_47_0.217813377042051_5.69386918924218_0.472014239747252-3 chr2 104711670 104712563 + 0.472014239747252 NA promoter-TSS (NM_177190) promoter-TSS (NM_177190) 46 NM_177190 320554 Mm.249065 NM_177190 ENSMUSG00000027175 Tcp11l1 C130096D04Rik t-complex 11 like 1 protein-coding common_peak2_67_47_0.217813377042051_5.69386918924218_0.472014239747252-3 chr7 45128306 45128726 + 0.472014239747252 NA intron (NM_009438, intron 1 of 7) intron (NM_009438, intron 1 of 7) 229 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding common_peak2_67_47_0.217813377042051_5.69386918924218_0.472014239747252 chr15 81465543 81466072 + 0.472014239747252 NA promoter-TSS (NM_019712) promoter-TSS (NM_019712) -509 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak2_56_56_-0.28289095739214_5.69144453546867_0.472014239747252-3 chr11 98773943 98774719 + 0.472014239747252 NA intron (NM_145434, intron 1 of 7) intron (NM_145434, intron 1 of 7) 1046 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak2_56_56_-0.28289095739214_5.69144453546867_0.472014239747252-4 chr13 23746837 23747494 + 0.472014239747252 NA TTS (NM_175664) TTS (NM_175664) 431 NM_175664 319178 Mm.390567 NM_175664 ENSMUSG00000075031 Hist1h2bb H2b-143 histone cluster 1, H2bb protein-coding common_peak1_67_47_0.217813377042051_5.69386918924218_0.472014239747252 chr14 47276985 47277785 + 0.472014239747252 NA promoter-TSS (NM_172598) promoter-TSS (NM_172598) 242 NM_080843 67296 Mm.23957 NM_080843 ENSMUSG00000048379 Socs4 3110032M18Rik|A730004F22Rik|AI427843|AU015727|AU015859|Socs7 suppressor of cytokine signaling 4 protein-coding common_peak1_67_47_0.217813377042051_5.69386918924218_0.472014239747252-2 chr2 70508695 70509421 + 0.472014239747252 NA 5' UTR (NM_025744, exon 1 of 13) 5' UTR (NM_025744, exon 1 of 13) 239 NM_025744 66748 Mm.423014 NM_025744 ENSMUSG00000075302 Erich2 4933404M02Rik glutamate rich 2 protein-coding common_peak2_67_47_0.217813377042051_5.69386918924218_0.472014239747252-2 chr4 49632104 49632626 + 0.472014239747252 NA 5' UTR (NM_001163263, exon 1 of 20) 5' UTR (NM_001163263, exon 1 of 20) 305 NM_182999 109331 Mm.24765 NM_182999 ENSMUSG00000028309 Rnf20 4833430L21Rik|AW540162|C79397|mKIAA4116 ring finger protein 20 protein-coding common_peak1_67_47_0.217813377042051_5.69386918924218_0.472014239747252-4 chr7 128744950 128745608 + 0.472014239747252 NA intron (NM_001029982, intron 1 of 18) intron (NM_001029982, intron 1 of 18) 409 NM_001029982 207352 Mm.297105 NM_001029982 ENSMUSG00000055319 Sec23ip D7Ertd373e|p125 Sec23 interacting protein protein-coding common_peak1_241_215_-0.133631720760388_7.68807164178327_0.471850639261588 chr19 8712385 8714511 + 0.471850639261588 NA exon (NM_008577, exon 1 of 9) exon (NM_008577, exon 1 of 9) 449 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_139_101_0.164820691427821_6.75483568768541_0.471821985969629 chr12 83687543 83689296 + 0.471821985969629 NA promoter-TSS (NM_008943) promoter-TSS (NM_008943) -144 NM_008943 19164 Mm.998 NM_008943 ENSMUSG00000019969 Psen1 Ad3h|PS-1|PS1|S182 presenilin 1 protein-coding common_peak2_139_101_0.164820691427821_6.75483568768541_0.471821985969629 chr7 97081809 97083109 + 0.471821985969629 NA intron (NM_001162477, intron 1 of 9) intron (NM_001162477, intron 1 of 9) 708 NM_010248 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_122_114_-0.193694881116482_6.74864261038613_0.471821985969604 chr1 171294283 171295367 + 0.471821985969604 NA 5' UTR (NM_001360931, exon 2 of 7) 5' UTR (NM_001360931, exon 2 of 7) 177 NM_001360932 66155 Mm.2815 NM_025388 ENSMUSG00000062963 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-10 chr6 136828479 136828760 + 0.471456499375596 NA promoter-TSS (NM_178776) promoter-TSS (NM_178776) -224 NM_178776 320135 Mm.386899 NM_178776 ENSMUSG00000047515 BC049715 - cDNA sequence BC049715 protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-7 chr7 48761333 48761904 + 0.471456499375596 NA Intergenic Intergenic -27385 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-8 chr2 135737838 135738517 + 0.471456499375596 NA intron (NM_001355156, intron 1 of 37) RMER4B|LTR|ERVK -26661 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-5 chr15 52928755 52928981 + 0.471456499375596 NA Intergenic Intergenic 216423 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-8 chr9 50659073 50659448 + 0.471456499375596 NA exon (NM_145614, exon 1 of 14) exon (NM_145614, exon 1 of 14) 520 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-2 chr1 93173138 93173491 + 0.471456499375596 NA intron (NM_001310428, intron 1 of 31) intron (NM_001310428, intron 1 of 31) 4891 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-2 chr14 20892735 20893266 + 0.471456499375596 NA Intergenic B1F|SINE|Alu -36398 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-4 chr11 96822970 96823403 + 0.471456499375596 NA intron (NM_008686, intron 2 of 4) intron (NM_008686, intron 2 of 4) 745 NM_001361682 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-10 chr7 132723171 132723802 + 0.471456499375596 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 53430 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-8 chr15 27822417 27822773 + 0.471456499375596 NA intron (NM_001081302, intron 30 of 56) MER45C|DNA|hAT-Tip100 -141053 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-9 chr6 38636908 38637203 + 0.471456499375596 NA exon (NM_001033171, exon 1 of 5) exon (NM_001033171, exon 1 of 5) 184 NM_001033171 74253 Mm.121859 NM_001033171 ENSMUSG00000071537 Klrg2 2310020F24Rik killer cell lectin-like receptor subfamily G, member 2 protein-coding unique_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-2 chr7 100862817 100863203 + 0.471456499375596 NA intron (NM_177073, intron 1 of 10) CpG 403 NM_001358914 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-16 chr9 20972338 20972699 + 0.471456499375596 NA intron (NM_010333, intron 1 of 1) intron (NM_010333, intron 1 of 1) 4275 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596 chr1 62722344 62722847 + 0.471456499375596 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 19278 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-3 chr10 76531805 76532159 + 0.471456499375596 NA exon (NM_146006, exon 2 of 22) exon (NM_146006, exon 2 of 22) 377 NM_146006 16987 Mm.55075 NM_146006 ENSMUSG00000033105 Lss 2810025N20Rik|D10Ertd116e|Osc lanosterol synthase protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-2 chr10 77118806 77119180 + 0.471456499375596 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -5288 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-7 chr13 63186676 63187017 + 0.471456499375596 NA intron (NM_001289926, intron 7 of 15) intron (NM_001289926, intron 7 of 15) -53183 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596 chr1 92800632 92800962 + 0.471456499375596 NA Intergenic Intergenic -30848 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-6 chr2 26963756 26964153 + 0.471456499375596 NA intron (NM_207234, intron 1 of 7) intron (NM_207234, intron 1 of 7) 432 NM_207234 227656 Mm.291874 NM_207234 ENSMUSG00000052406 Rexo4 Gm111|Rex4|Xpmc2h REX4, 3'-5' exonuclease protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-6 chr7 3142603 3143075 + 0.471456499375596 NA intron (NR_001583, intron 3 of 3) intron (NR_001583, intron 3 of 3) 14693 NR_001583 73949 Mm.55687 NR_001583 ENSMUSG00000107956 Speer9-ps1 4930415A14Rik|SPEER-9|Speer9-ps spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1 pseudo unique_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-4 chr9 118149583 118150061 + 0.471456499375596 NA promoter-TSS (NR_155294) promoter-TSS (NR_155294) 374 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596 chr10 128438418 128439045 + 0.471456499375596 NA non-coding (NR_104288, exon 7 of 7) non-coding (NR_104288, exon 7 of 7) -19949 NR_106183 102465894 NR_106183 ENSMUSG00000098957 Mir8105 Gm27346|mmu-mir-8105 microRNA 8105 ncRNA unique_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596 chr4 133338682 133339154 + 0.471456499375596 NA intron (NM_199306, intron 1 of 15) CpG 397 NM_199306 230796 Mm.226576 NM_199306 ENSMUSG00000037622 Wdtc1 Gm695|adipose|adp WD and tetratricopeptide repeats 1 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-7 chr2 93217182 93217630 + 0.471456499375596 NA intron (NM_183180, intron 5 of 9) intron (NM_183180, intron 5 of 9) 29858 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-4 chr11 77801136 77801660 + 0.471456499375596 NA promoter-TSS (NM_001291215) promoter-TSS (NM_001291215) 100 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-9 chr6 88968044 88968571 + 0.471456499375596 NA Intergenic Intergenic 66056 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-5 chr11 116198280 116198534 + 0.471456499375596 NA promoter-TSS (NM_027107) promoter-TSS (NM_027107) -448 NM_027107 69535 Mm.390347 NM_027107 ENSMUSG00000020778 Ten1 2310004N24Rik TEN1 telomerase capping complex subunit protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-9 chr7 112699416 112699936 + 0.471456499375596 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 20356 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-2 chr2 153136600 153136908 + 0.471456499375596 NA exon (NM_010407, exon 9 of 13) exon (NM_010407, exon 9 of 13) -24547 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-8 chr2 178414071 178414376 + 0.471456499375596 NA promoter-TSS (NM_001081289) promoter-TSS (NM_001081289) 240 NM_001085501 228966 Mm.472736 NM_001085501 ENSMUSG00000049999 Ppp1r3d 2610024M03Rik|Gm359 protein phosphatase 1, regulatory subunit 3D protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-12 chr19 41674656 41674947 + 0.471456499375596 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 69055 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-6 chr4 48279838 48280158 + 0.471456499375596 NA promoter-TSS (NM_029572) promoter-TSS (NM_029572) 238 NM_001281977 16348 Mm.317706 NM_010569 ENSMUSG00000028344 Invs Nphp2|inv inversin protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-9 chr17 78401735 78402072 + 0.471456499375596 NA intron (NM_001360407, intron 4 of 9) intron (NM_001360407, intron 4 of 9) 16249 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-11 chr8 61606243 61606537 + 0.471456499375596 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -15221 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-11 chr8 4313441 4313729 + 0.471456499375596 NA intron (NM_010485, intron 1 of 5) intron (NM_010485, intron 1 of 5) 11515 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-5 chr6 88964311 88964605 + 0.471456499375596 NA Intergenic Intergenic 62207 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-2 chr7 140881977 140882245 + 0.471456499375596 NA promoter-TSS (NM_001177804) promoter-TSS (NM_001177804) 198 NM_022433 64384 Mm.29760 NM_022433 ENSMUSG00000025486 Sirt3 2310003L23Rik|AI848213|Sir2l3 sirtuin 3 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-10 chr7 44896244 44896654 + 0.471456499375596 NA intron (NM_027376, intron 1 of 10) intron (NM_027376, intron 1 of 10) 370 NM_027376 70300 Mm.276298 NM_027376 ENSMUSG00000011658 Fuz 2600013E07Rik|b2b1273Clo fuzzy planar cell polarity protein protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-13 chr4 135273286 135273566 + 0.471456499375596 NA promoter-TSS (NM_013885) promoter-TSS (NM_013885) -666 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-12 chr9 107553995 107554357 + 0.471456499375596 NA promoter-TSS (NM_019713) promoter-TSS (NM_019713) -407 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-7 chr4 127328420 127328785 + 0.471456499375596 NA intron (NM_001160012, intron 1 of 1) intron (NM_001160012, intron 1 of 1) 523 NM_008126 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-6 chr15 102983628 102984032 + 0.471456499375596 NA intron (NM_008272, intron 2 of 2) intron (NM_008272, intron 2 of 2) -2767 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-2 chr1 131828016 131828503 + 0.471456499375596 NA 5' UTR (NM_173865, exon 1 of 11) 5' UTR (NM_173865, exon 1 of 11) 247 NM_173865 98396 Mm.389181 NM_173865 ENSMUSG00000013275 Slc41a1 AI573938|B230315F01Rik solute carrier family 41, member 1 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-12 chr9 43231194 43231625 + 0.471456499375596 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 8407 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-14 chr5 115340865 115341108 + 0.471456499375596 NA promoter-TSS (NM_026933) promoter-TSS (NM_026933) 175 NM_029645 384281 Mm.229308 NM_029645 ENSMUSG00000029536 Gatc 2010003O18Rik glutamyl-tRNA(Gln) amidotransferase, subunit C protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-5 chr2 51277255 51277858 + 0.471456499375596 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 35725 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-15 chr6 83317275 83317586 + 0.471456499375596 NA exon (NM_008638, exon 1 of 8) exon (NM_008638, exon 1 of 8) 174 NM_008638 17768 Mm.443 NM_008638 ENSMUSG00000005667 Mthfd2 AW558851|NMDMC methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase protein-coding unique_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596 chr13 49653135 49653539 + 0.471456499375596 NA promoter-TSS (NM_025495) promoter-TSS (NM_025495) 259 NR_073167 70930 Mm.258915 NM_001081350 ENSMUSG00000021392 Nol8 4921532D18Rik|5730412B09Rik nucleolar protein 8 protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596 chr1 170189547 170190216 + 0.471456499375596 NA Intergenic Intergenic -14917 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-4 chr19 20601248 20601573 + 0.471456499375596 NA promoter-TSS (NM_013467) promoter-TSS (NM_013467) -558 NM_013467 11668 Mm.250866 NM_013467 ENSMUSG00000053279 Aldh1a1 ALDH-E1|ALHDII|Ahd-2|Ahd2|Aldh1|Aldh1a2|E1|Raldh1 aldehyde dehydrogenase family 1, subfamily A1 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-5 chr11 107341740 107342367 + 0.471456499375596 NA intron (NR_153311, intron 1 of 9) B3A|SINE|B2 128667 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596 chr1 72070951 72071242 + 0.471456499375596 NA Intergenic Intergenic -65901 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA common_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-3 chr11 16754389 16754686 + 0.471456499375596 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 2334 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-8 chr5 137746082 137746738 + 0.471456499375596 NA 5' UTR (NM_029805, exon 1 of 6) 5' UTR (NM_029805, exon 1 of 6) 441 NM_029805 78829 Mm.286399 NM_023910 ENSMUSG00000029723 Tsc22d4 0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2 TSC22 domain family, member 4 protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-3 chr3 122480361 122480826 + 0.471456499375596 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -2976 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-6 chr13 29503071 29503381 + 0.471456499375596 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 352447 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-4 chr13 108599029 108599350 + 0.471456499375596 NA Intergenic Intergenic -54988 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-11 chr18 39489425 39489750 + 0.471456499375596 NA Intergenic CpG -2342 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-3 chr19 16327128 16327583 + 0.471456499375596 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -12351 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-10 chr18 35889472 35889774 + 0.471456499375596 NA Intergenic CpG 34936 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_31_20_0.330667641865791_4.55765124371166_0.471456499375596-4 chr6 29526854 29527248 + 0.471456499375596 NA intron (NM_001311083, intron 1 of 9) CpG 426 NM_012057 27056 Mm.6479 NM_012057 ENSMUSG00000029771 Irf5 AW491843|mirf5 interferon regulatory factor 5 protein-coding unique_peak1_30_20_0.285187096347266_4.53491097095239_0.471456499375596-3 chr8 127963308 127963728 + 0.471456499375596 NA Intergenic Intergenic 314707 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_30_20_0.285187096347266_4.53491097095239_0.471456499375596-3 chr1 134411831 134412138 + 0.471456499375596 NA TTS (NM_001355133) TTS (NM_001355133) -3394 NM_028320 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak2_31_20_0.330667641865791_4.55765124371166_0.471456499375596-7 chr17 57032347 57032656 + 0.471456499375596 NA promoter-TSS (NM_010613) promoter-TSS (NM_010613) -994 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-5 chr5 36582144 36582381 + 0.471456499375593 NA intron (NM_001113362, intron 2 of 14) CpG 135 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-6 chr6 72355542 72355991 + 0.471456499375593 NA intron (NM_144916, intron 1 of 7) CpG 283 NM_144916 232086 Mm.491165 NM_144916 ENSMUSG00000055912 Tmem150a BC014685|Tmem150 transmembrane protein 150A protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-7 chr16 17406090 17406427 + 0.471456499375593 NA promoter-TSS (NM_001001983) promoter-TSS (NM_001001983) 56 NM_001001983 224020 Mm.5718 NM_001001983 ENSMUSG00000041720 Pi4ka Pik4ca phosphatidylinositol 4-kinase alpha protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-7 chr7 118705398 118705906 + 0.471456499375593 NA promoter-TSS (NM_019580) promoter-TSS (NM_019580) 86 NM_019580 56209 Mm.273142 NM_019580 ENSMUSG00000033917 Gde1 1200003M13Rik|Mir16|RGS16 glycerophosphodiester phosphodiesterase 1 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593 chr1 162547603 162548373 + 0.471456499375593 NA intron (NM_144877, intron 1 of 7) intron (NM_144877, intron 1 of 7) 357 NM_144877 71449 Mm.270569 NM_144877 ENSMUSG00000026694 Mettl13 5630401D24Rik methyltransferase like 13 protein-coding common_peak1_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-3 chr2 73893053 73893361 + 0.471456499375593 NA promoter-TSS (NM_001284376) promoter-TSS (NM_001284376) -568 NM_001284370 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-16 chr6 30896285 30896678 + 0.471456499375593 NA TTS (NM_054073) TTS (NM_054073) 313 NR_149738 54160 Mm.39896 NM_017478 ENSMUSG00000025607 Copg2 AW227625|gamma-2-COP coatomer protein complex, subunit gamma 2 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-6 chr13 56665055 56665427 + 0.471456499375593 NA Intergenic Intergenic -37769 NM_008541 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-12 chr4 9074282 9074772 + 0.471456499375593 NA Intergenic Intergenic -194766 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-11 chr3 95930096 95930611 + 0.471456499375593 NA intron (NM_001253758, intron 1 of 4) CpG 1096 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-8 chr16 78301881 78302357 + 0.471456499375593 NA intron (NM_001025192, intron 1 of 6) CpG 448 NM_001276263 13052 Mm.66222 NM_009988 ENSMUSG00000022865 Cxadr 2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR coxsackie virus and adenovirus receptor protein-coding common_peak1_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-2 chr15 100420441 100420861 + 0.471456499375593 NA intron (NM_008732, intron 1 of 16) intron (NM_008732, intron 1 of 16) 2404 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-2 chr15 97773920 97774333 + 0.471456499375593 NA Intergenic Intergenic -6460 NM_001357630 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-14 chr5 113772833 113773281 + 0.471456499375593 NA promoter-TSS (NM_016926) promoter-TSS (NM_016926) 245 NM_025526 66383 Mm.29497 NM_025526 ENSMUSG00000025825 Iscu 2310020H20Rik|AA407971|Nifu|Nifun iron-sulfur cluster assembly enzyme protein-coding common_peak1_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-5 chr7 24365104 24365557 + 0.471456499375593 NA Intergenic Intergenic -4933 NM_001163510 16534 Mm.9911 NM_008433 ENSMUSG00000054342 Kcnn4 IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-4 chr10 69917040 69917538 + 0.471456499375593 NA intron (NM_170689, intron 23 of 41) intron (NM_170689, intron 23 of 41) -8243 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding common_peak1_23_26_-0.444011855718219_4.53288157430436_0.471456499375593 chr13 95326811 95327209 + 0.471456499375593 NA intron (NM_001302539, intron 1 of 1) intron (NM_001302539, intron 1 of 1) 243 NM_001302539 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-3 chr10 7159319 7159837 + 0.471456499375593 NA intron (NM_172546, intron 2 of 12) intron (NM_172546, intron 2 of 12) 52659 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-4 chr4 129696306 129696724 + 0.471456499375593 NA intron (NM_001356378, intron 1 of 9) intron (NM_001356378, intron 1 of 9) 330 NM_199305 230770 Mm.257157 NM_199305 ENSMUSG00000053730 Tmem39b 6330509E05Rik|BC037095 transmembrane protein 39b protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-3 chr18 4352748 4353286 + 0.471456499375593 NA promoter-TSS (NR_040328) promoter-TSS (NR_040328) -64 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593 chr1 136234121 136234509 + 0.471456499375593 NA promoter-TSS (NM_028872) promoter-TSS (NM_028872) -35 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-8 chr9 70291394 70291840 + 0.471456499375593 NA intron (NM_181072, intron 2 of 27) intron (NM_181072, intron 2 of 27) 84267 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-13 chr5 53102590 53102917 + 0.471456499375593 NA Intergenic Intergenic 53400 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-2 chr1 168431351 168431686 + 0.471456499375593 NA 5' UTR (NM_001291509, exon 1 of 7) 5' UTR (NM_001291509, exon 1 of 7) 651 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-10 chr3 61441997 61442427 + 0.471456499375593 NA Intergenic Intergenic 77705 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-9 chr2 157065620 157066074 + 0.471456499375593 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 13418 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding unique_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-4 chr2 93457932 93458552 + 0.471456499375593 NA intron (NR_040532, intron 2 of 4) intron (NR_040532, intron 2 of 4) 3609 NM_001271461 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-5 chr10 96807099 96807521 + 0.471456499375593 NA Intergenic Intergenic 190309 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-15 chr6 18848140 18848488 + 0.471456499375593 NA promoter-TSS (NM_133939) promoter-TSS (NM_133939) -321 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding common_peak1_23_26_-0.444011855718219_4.53288157430436_0.471456499375593-6 chr8 86863212 86863582 + 0.471456499375593 NA intron (NM_030563, intron 1 of 6) (CA)n|Simple_repeat|Simple_repeat 21861 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_143_132_-0.177681145974973_6.9664418625137_0.47136252494492 chr3 116661744 116662579 + 0.47136252494492 NA intron (NM_008246, intron 1 of 11) CpG 516 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding common_peak1_161_118_0.151509710246426_6.97057261843116_0.47136252494492 chr3 81035775 81037117 + 0.47136252494492 NA promoter-TSS (NM_019971) promoter-TSS (NM_019971) 30 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_295_221_0.115379935987602_7.85210583434391_0.471121887326535 chr9 69455003 69458014 + 0.471121887326535 NA promoter-TSS (NR_037296) promoter-TSS (NR_037296) -436 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak1_104_98_-0.204220004879595_6.52724661763981_0.4710919888931-2 chr6 136827145 136828170 + 0.4710919888931 NA intron (NM_021714, intron 1 of 11) intron (NM_021714, intron 1 of 11) 559 NM_021714 60321 Mm.141197 NM_021714 ENSMUSG00000030216 Wbp11 2510026P17Rik|D6Wsu113e|Npwbp|SIPP1 WW domain binding protein 11 protein-coding common_peak1_104_98_-0.204220004879595_6.52724661763981_0.4710919888931 chr3 37418508 37419544 + 0.4710919888931 NA promoter-TSS (NM_001163511) promoter-TSS (NM_001163511) 570 NM_001291044 229228 Mm.436967 NM_153561 ENSMUSG00000050174 Nudt6 Asfgf2b nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein-coding common_peak1_119_86_0.173479090203913_6.52968304095068_0.4710919888931 chr6 65778682 65779968 + 0.4710919888931 NA intron (NM_029549, intron 1 of 10) CpG 363 NM_029549 70779 Mm.263355 NM_027547 ENSMUSG00000029913 Prdm5 4432417F03Rik|6530401I24Rik|AI197291|E130112L17Rik|PFM2 PR domain containing 5 protein-coding common_peak1_71_69_-0.244626747845506_6.00696964302221_0.470849273483598-3 chr6 143166708 143167960 + 0.470849273483598 NA 5' UTR (NM_029250, exon 1 of 8) 5' UTR (NM_029250, exon 1 of 8) 104 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding common_peak1_71_69_-0.244626747845506_6.00696964302221_0.470849273483598-2 chr4 155943057 155943594 + 0.470849273483598 NA promoter-TSS (NM_001039157) promoter-TSS (NM_001039157) -488 NM_001039158 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak1_71_69_-0.244626747845506_6.00696964302221_0.470849273483598 chr17 71183649 71184828 + 0.470849273483598 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) 260 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_83_59_0.198589120837617_6.00618515602733_0.470849273483586 chr14 70334007 70334979 + 0.470849273483586 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 13940 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_83_59_0.198589120837617_6.00618515602733_0.470849273483586-2 chr17 25539765 25540320 + 0.470849273483586 NA Intergenic Intergenic 21453 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA common_peak2_83_59_0.198589120837617_6.00618515602733_0.470849273483586 chr6 119902388 119903447 + 0.470849273483586 NA intron (NR_149727, intron 1 of 10) CpG 219 NM_001166383 19365 Mm.149 NM_011236 ENSMUSG00000030166 Rad52 Rad52yh RAD52 homolog, DNA repair protein protein-coding common_peak1_83_59_0.198589120837617_6.00618515602733_0.470849273483586-3 chr2 35229517 35230219 + 0.470849273483586 NA Intergenic Intergenic -26491 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_44_45_-0.312193808630429_5.3674650517418_0.470780655014941-3 chr17 47501711 47502303 + 0.470780655014941 NA intron (NM_001356290, intron 1 of 7) intron (NM_001356290, intron 1 of 7) 284 NM_001356290 63856 Mm.275901 NM_022015 ENSMUSG00000023980 Taf8 AW260255|Tbn TATA-box binding protein associated factor 8 protein-coding common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-3 chr15 52712474 52712856 + 0.470780655014941 NA exon (NM_027212, exon 1 of 4) exon (NM_027212, exon 1 of 4) 220 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-8 chr7 67972891 67973475 + 0.470780655014941 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 20926 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_54_37_0.250904787907354_5.37337990739726_0.470780655014941-5 chr7 3692222 3692716 + 0.470780655014941 NA intron (NM_029934, intron 1 of 7) intron (NM_029934, intron 1 of 7) 1056 NM_029934 77582 Mm.397541 NM_029934 ENSMUSG00000035596 Mboat7 5730589L02Rik|BB1|Leng4|Lpiat|Lpiat1|mBB1 membrane bound O-acyltransferase domain containing 7 protein-coding common_peak2_54_37_0.250904787907354_5.37337990739726_0.470780655014941 chr10 68008566 68009135 + 0.470780655014941 NA intron (NM_001359319, intron 6 of 11) intron (NM_001359319, intron 6 of 11) 29280 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak2_54_37_0.250904787907354_5.37337990739726_0.470780655014941-2 chr11 51874602 51875041 + 0.470780655014941 NA Intergenic Intergenic -17191 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_54_37_0.250904787907354_5.37337990739726_0.470780655014941-4 chr19 55245060 55245651 + 0.470780655014941 NA Intergenic Intergenic -4119 NM_001081076 73707 Mm.489987 NM_001081076 ENSMUSG00000055523 Gucy2g 2410077I05Rik|GC-G guanylate cyclase 2g protein-coding common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-6 chr5 35617308 35618083 + 0.470780655014941 NA Intergenic Intergenic -28932 NR_045807 74364 Mm.473123 NM_175208 ENSMUSG00000055061 4931431C16Rik - RIKEN cDNA 4931431C16 gene ncRNA common_peak2_44_45_-0.312193808630429_5.3674650517418_0.470780655014941 chr12 35193020 35193506 + 0.470780655014941 NA Intergenic Intergenic 1634 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941 chr11 35955889 35956688 + 0.470780655014941 NA intron (NM_170779, intron 1 of 22) PB1D10|SINE|Alu 23801 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-2 chr11 51874611 51875075 + 0.470780655014941 NA Intergenic Intergenic -17213 NM_001357588 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_54_37_0.250904787907354_5.37337990739726_0.470780655014941-3 chr11 57707787 57708727 + 0.470780655014941 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) -58763 NR_153850 78762 Mm.362149 NR_153850 4933424L21Rik - RIKEN cDNA 4933424L21 gene ncRNA common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-7 chr7 25076466 25076968 + 0.470780655014941 NA promoter-TSS (NM_175477) promoter-TSS (NM_175477) -90 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak2_44_45_-0.312193808630429_5.3674650517418_0.470780655014941-2 chr2 145674942 145675602 + 0.470780655014941 NA Intergenic CpG -25923 NR_033220 408057 Mm.486711 NR_033220 ENSMUSG00000087594 BC039771 - cDNA sequence BC039771 ncRNA common_peak2_44_45_-0.312193808630429_5.3674650517418_0.470780655014941-4 chr9 107698943 107699382 + 0.470780655014941 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 6429 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_44_45_-0.312193808630429_5.3674650517418_0.470780655014941 chr10 39613120 39613741 + 0.470780655014941 NA intron (NM_134000, intron 1 of 8) intron (NM_134000, intron 1 of 8) 252 NR_152259 100504626 Mm.440236 NR_152259 Gm16364 Gm16365 predicted gene 16364 ncRNA common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-4 chr19 53732220 53732601 + 0.470780655014941 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) 55104 NM_001170847 73713 Mm.313695 NM_001170847 ENSMUSG00000043639 Rbm20 1110018J23Rik|2010003H22Rik|AI646761 RNA binding motif protein 20 protein-coding common_peak1_44_45_-0.312193808630429_5.3674650517418_0.470780655014941-2 chr16 34572537 34573169 + 0.470780655014941 NA Intergenic CpG -58826 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak2_44_45_-0.312193808630429_5.3674650517418_0.470780655014941-3 chr2 157566966 157567229 + 0.470780655014941 NA promoter-TSS (NM_016916) promoter-TSS (NM_016916) -736 NM_016916 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak1_54_37_0.250904787907354_5.37337990739726_0.470780655014941-5 chr3 34020592 34021200 + 0.470780655014941 NA intron (NM_001113189, intron 1 of 16) intron (NM_001113189, intron 1 of 16) 817 NM_001113189 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak2_100_72_0.179673340377396_6.27966122906872_0.470687517451348 chr13 55622435 55623482 + 0.470687517451348 NA promoter-TSS (NM_007596) promoter-TSS (NM_007596) -47 NM_007596 12328 Mm.2313 NM_007596 ENSMUSG00000021501 Caml AI385748|Camlg calcium modulating ligand protein-coding common_peak2_101_72_0.193786921110644_6.28671801943534_0.470687517451348-2 chr3 90265208 90266232 + 0.470687517451348 NA promoter-TSS (NM_201407) promoter-TSS (NM_201407) 485 NM_001356483 229541 Mm.30571 NM_201407 ENSMUSG00000042404 Dennd4b - DENN/MADD domain containing 4B protein-coding common_peak2_100_72_0.179673340377396_6.27966122906872_0.470687517451348-3 chr18 46596733 46597502 + 0.470687517451348 NA promoter-TSS (NM_010120) promoter-TSS (NM_010120) 418 NM_025698 66676 Mm.296043 NM_025698 ENSMUSG00000033184 Tmed7 3930401E15Rik|5830493P14Rik|AU044611|AW545765|TRAM transmembrane p24 trafficking protein 7 protein-coding common_peak1_100_72_0.179673340377396_6.27966122906872_0.470687517451348-2 chr7 90096634 90097411 + 0.470687517451348 NA Intergenic A-rich|Low_complexity|Low_complexity 32452 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak1_87_83_-0.220196999754945_6.28221892290129_0.470687517451348 chr12 80790624 80791531 + 0.470687517451348 NA intron (NM_001242419, intron 1 of 6) CpG 545 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak2_101_72_0.193786921110644_6.28671801943534_0.470687517451348 chr17 25014765 25015719 + 0.470687517451348 NA promoter-TSS (NM_020608) promoter-TSS (NM_020608) -12 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 cramped chromatin regulator homolog 1 protein-coding common_peak2_100_72_0.179673340377396_6.27966122906872_0.470687517451348-2 chr16 10981308 10982585 + 0.470687517451348 NA intron (NM_019980, intron 1 of 3) B3A|SINE|B2 11175 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_87_83_-0.220196999754945_6.28221892290129_0.470687517451348-2 chr7 49248972 49249773 + 0.470687517451348 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 3183 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_100_72_0.179673340377396_6.27966122906872_0.470687517451348 chr5 117318610 117319817 + 0.470687517451348 NA promoter-TSS (NM_001033311) promoter-TSS (NM_001033311) -53 NM_001033311 231668 Mm.298603 NM_001033311 ENSMUSG00000066894 Vsig10 - V-set and immunoglobulin domain containing 10 protein-coding common_peak2_87_83_-0.220196999754945_6.28221892290129_0.470687517451348 chr4 6365428 6366402 + 0.470687517451348 NA intron (NM_001098227, intron 1 of 8) CpG 235 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak2_41_28_0.254553700891808_4.98525784557348_0.470271536760928 chr3 104706750 104707237 + 0.470271536760928 NA Intergenic Intergenic 68329 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-6 chr17 46751554 46752075 + 0.470271536760928 NA intron (NM_028065, intron 1 of 5) intron (NM_028065, intron 1 of 5) 400 NM_001305989 72029 Mm.240325 NM_028065 ENSMUSG00000023973 Cnpy3 1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5 canopy FGF signaling regulator 3 protein-coding common_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-6 chr7 89679152 89679881 + 0.470271536760928 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 46698 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-7 chr18 53861640 53861954 + 0.470271536760928 NA promoter-TSS (NM_152809) promoter-TSS (NM_152809) -316 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-3 chr2 14055069 14055789 + 0.470271536760928 NA intron (NM_001012396, intron 1 of 5) CpG 606 NM_001012396 30963 Mm.241205 NM_013935 ENSMUSG00000063275 Hacd1 Ptpla 3-hydroxyacyl-CoA dehydratase 1 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-5 chr15 83473617 83473977 + 0.470271536760928 NA Intergenic Intergenic -9191 NM_001358643 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-10 chr3 144203216 144203709 + 0.470271536760928 NA intron (NM_010723, intron 1 of 4) intron (NM_010723, intron 1 of 4) -1066 NM_001161769 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-8 chr18 60745947 60746536 + 0.470271536760928 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 505 NM_001348101 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928-2 chr10 93356347 93357192 + 0.470271536760928 NA Intergenic Intergenic 20558 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA common_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928 chr1 193398509 193398770 + 0.470271536760928 NA Intergenic Intergenic -28357 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928-4 chr18 6136416 6136897 + 0.470271536760928 NA promoter-TSS (NM_029277) promoter-TSS (NM_029277) -558 NM_001039692 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-2 chr10 33950893 33951257 + 0.470271536760928 NA intron (NM_001359455, intron 1 of 10) CpG 184 NM_001359456 72580 Mm.248081 NM_028287 ENSMUSG00000039531 Zufsp 2700019D07Rik zinc finger with UFM1-specific peptidase domain protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-8 chr18 60500193 60500567 + 0.470271536760928 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 1603 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak2_42_28_0.28826153508186_5.0021117626685_0.470271536760928-2 chr13 98815417 98815935 + 0.470271536760928 NA promoter-TSS (NM_172591) promoter-TSS (NM_172591) -227 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-12 chr7 39517537 39517942 + 0.470271536760928 NA promoter-TSS (NM_001004139) promoter-TSS (NM_001004139) -27 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-3 chr10 61475895 61476480 + 0.470271536760928 NA intron (NM_153542, intron 1 of 4) CpG 354 NM_153542 216011 Mm.136116 NM_153542 ENSMUSG00000037151 Lrrc20 BC036304 leucine rich repeat containing 20 protein-coding unique_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928 chr15 64373536 64374203 + 0.470271536760928 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 9050 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-4 chr13 23581610 23582221 + 0.470271536760928 NA TTS (NM_175654) TTS (NM_175654) 313 NM_175654 319156 Mm.260530 NM_175654 ENSMUSG00000061482 Hist1h4d - histone cluster 1, H4d protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928 chr10 9900788 9901158 + 0.470271536760928 NA promoter-TSS (NM_001081344) promoter-TSS (NM_001081344) 67 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding common_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-5 chr5 124922501 124923016 + 0.470271536760928 NA Intergenic URR1B|DNA|hAT-Charlie 60053 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928-7 chr6 121102137 121102695 + 0.470271536760928 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -20789 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-2 chr1 193398453 193398764 + 0.470271536760928 NA Intergenic Intergenic -28326 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928-6 chr2 170130576 170131053 + 0.470271536760928 NA intron (NM_001159683, intron 2 of 6) CpG 406 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-2 chr10 43228572 43228980 + 0.470271536760928 NA intron (NM_027772, intron 1 of 7) intron (NM_027772, intron 1 of 7) 7290 NM_001168289 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-11 chr4 130360260 130360813 + 0.470271536760928 NA promoter-TSS (NM_153160) promoter-TSS (NM_153160) 404 NM_025645 66585 Mm.423019 NM_025645 ENSMUSG00000074088 Snrnp40 0610009C03Rik|Prp8bp|Wdr57 small nuclear ribonucleoprotein 40 (U5) protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928 chr1 82577822 82578361 + 0.470271536760928 NA intron (NM_007735, intron 1 of 47) intron (NM_007735, intron 1 of 47) 8758 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928-5 chr19 28287667 28288297 + 0.470271536760928 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -276816 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-7 chr17 80809820 80810332 + 0.470271536760928 NA Intergenic Intergenic -82051 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928 chr1 43218195 43218644 + 0.470271536760928 NA Intergenic Intergenic -21658 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-13 chr7 84337176 84337997 + 0.470271536760928 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 72452 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-9 chr19 53414215 53414606 + 0.470271536760928 NA Intergenic Intergenic -23776 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-4 chr12 79540092 79540793 + 0.470271536760928 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 243091 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-3 chr10 43228563 43228982 + 0.470271536760928 NA intron (NM_027772, intron 1 of 7) intron (NM_027772, intron 1 of 7) 7286 NM_001168289 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-4 chr4 155868694 155869264 + 0.470271536760928 NA promoter-TSS (NM_028020) promoter-TSS (NM_028020) 461 NM_024472 79554 Mm.25556 NM_024472 ENSMUSG00000029073 Cptp Gltpd1 ceramide-1-phosphate transfer protein protein-coding unique_peak2_33_35_-0.360094144105861_4.98987792938938_0.470271536760928 chr3 128456547 128457239 + 0.470271536760928 NA Intergenic Intergenic -225288 NR_045704 402774 Mm.209170 NR_045704 ENSMUSG00000105816 D030025E07Rik - RIKEN cDNA D030025E07 gene ncRNA common_peak1_33_35_-0.360094144105861_4.98987792938938_0.470271536760928-5 chr13 33000809 33001253 + 0.470271536760928 NA Intergenic Intergenic -3510 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak1_41_28_0.254553700891808_4.98525784557348_0.470271536760928-3 chr14 20891534 20891937 + 0.470271536760928 NA Intergenic Intergenic -37663 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_42_28_0.28826153508186_5.0021117626685_0.470271536760928 chr1 191718710 191719216 + 0.470271536760928 NA intron (NM_001134829, intron 1 of 7) CpG 568 NM_001134829 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak1_42_28_0.28826153508186_5.0021117626685_0.470271536760928-6 chr17 87975167 87975773 + 0.470271536760928 NA intron (NM_010830, intron 1 of 9) CpG 420 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding common_peak1_124_115_-0.183080213794629_6.76644088823026_0.470245969997857 chr4 46138094 46139228 + 0.470245969997857 NA promoter-TSS (NM_173033) promoter-TSS (NM_173033) 48 NM_001355376 272027 Mm.249594 NM_173033 ENSMUSG00000035495 Tstd2 3010020C06 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 protein-coding common_peak2_216_194_-0.142276704195942_7.53619196165164_0.470241672322709 chr15 85567321 85569427 + 0.470241672322709 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 9696 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_167_152_-0.15896310581976_7.17790628978277_0.470165253945334 chr1 135842527 135844529 + 0.470165253945334 NA intron (NM_001130179, intron 4 of 14) intron (NM_001130179, intron 4 of 14) 2667 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak1_145_133_-0.168728734465089_6.98172482322523_0.470009280371669 chr9 116174205 116175710 + 0.470009280371669 NA exon (NM_009371, exon 1 of 8) exon (NM_009371, exon 1 of 8) 406 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_105_99_-0.205141114078108_6.54128563273567_0.469260807609282 chr7 43579674 43580571 + 0.469260807609282 NA intron (NM_001357769, intron 1 of 3) intron (NM_001357769, intron 1 of 3) 536 NM_001357769 210105 Mm.234422 NM_172482 ENSMUSG00000030469 Zfp719 8030458J18|9430094P17Rik|C630016O21Rik|mszf6 zinc finger protein 719 protein-coding common_peak2_120_87_0.168879142339027_6.54387118980681_0.469260807609233 chr6 34720791 34721728 + 0.469260807609233 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 11815 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_298_224_0.110460281670045_7.86901133205206_0.468935337611028 chr11 77785130 77786996 + 0.468935337611028 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) 8828 NM_001291212 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_58_57_-0.258579909804892_5.72869104022513_0.468749305398727-2 chr9 86467215 86467775 + 0.468749305398727 NA intron (NM_177208, intron 1 of 38) CpG 341 NM_177208 320615 Mm.245500 NM_177208 ENSMUSG00000034973 Dopey1 B130005I07Rik|BC035275|C130028L17|D9Ertd809e dopey family member 1 protein-coding common_peak1_58_57_-0.258579909804892_5.72869104022513_0.468749305398727 chr8 47714329 47714754 + 0.468749305398727 NA promoter-TSS (NM_172407) promoter-TSS (NM_172407) -610 NM_172407 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak2_57_57_-0.283067973750305_5.71644700825242_0.468749305398727 chr13 36533135 36533967 + 0.468749305398727 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 200926 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_57_57_-0.283067973750305_5.71644700825242_0.468749305398727 chr15 11539883 11540557 + 0.468749305398727 NA Intergenic Intergenic -140562 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_57_57_-0.283067973750305_5.71644700825242_0.468749305398727-2 chr13 52891786 52892651 + 0.468749305398727 NA intron (NM_016709, intron 4 of 9) intron (NM_016709, intron 4 of 9) 37459 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak2_58_57_-0.258579909804892_5.72869104022513_0.468749305398727 chr11 90638216 90638708 + 0.468749305398727 NA promoter-TSS (NM_011505) promoter-TSS (NM_011505) 278 NM_199008 69802 Mm.151940 NM_199008 ENSMUSG00000020544 Cox11 2010004I09Rik cytochrome c oxidase assembly protein 11 protein-coding common_peak1_57_57_-0.283067973750305_5.71644700825242_0.468749305398727-2 chr5 30959659 30960175 + 0.468749305398727 NA intron (NM_001294302, intron 1 of 7) intron (NM_001294302, intron 1 of 7) 410 NM_001294302 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding common_peak1_68_48_0.208979059908501_5.71919937406946_0.468749305398715 chr11 43921047 43922289 + 0.468749305398715 NA Intergenic Intergenic -20431 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_69_48_0.22959116885735_5.72950542854388_0.468749305398715-2 chr8 126391837 126392304 + 0.468749305398715 NA intron (NM_175434, intron 6 of 6) intron (NM_175434, intron 6 of 6) -30431 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak1_69_48_0.22959116885735_5.72950542854388_0.468749305398715-3 chr7 73540411 73541656 + 0.468749305398715 NA non-coding (NR_037569, exon 5 of 5) non-coding (NR_037569, exon 5 of 5) 713 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak1_68_48_0.208979059908501_5.71919937406946_0.468749305398715-2 chr4 89128359 89129166 + 0.468749305398715 NA promoter-TSS (NR_151607) promoter-TSS (NR_151607) -536 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak1_69_48_0.22959116885735_5.72950542854388_0.468749305398715-2 chr7 31150500 31151489 + 0.468749305398715 NA non-coding (NR_153431, exon 1 of 19) non-coding (NR_153431, exon 1 of 19) 177 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak1_69_48_0.22959116885735_5.72950542854388_0.468749305398715-4 chr9 78107982 78108594 + 0.468749305398715 NA promoter-TSS (NM_001163780) promoter-TSS (NM_001163780) 368 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding common_peak2_68_48_0.208979059908501_5.71919937406946_0.468749305398715-2 chr3 121600524 121601394 + 0.468749305398715 NA Intergenic Intergenic 42526 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_69_48_0.22959116885735_5.72950542854388_0.468749305398715 chr1 153092742 153093611 + 0.468749305398715 NA intron (NM_175460, intron 7 of 10) intron (NM_175460, intron 7 of 10) 93271 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_68_48_0.208979059908501_5.71919937406946_0.468749305398715 chr10 69670379 69671001 + 0.468749305398715 NA intron (NM_170730, intron 1 of 17) intron (NM_170730, intron 1 of 17) 136982 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding common_peak1_69_48_0.22959116885735_5.72950542854388_0.468749305398715 chr19 8893025 8893634 + 0.468749305398715 NA intron (NM_176843, intron 1 of 1) intron (NM_176843, intron 1 of 1) 342 NM_176843 109077 Mm.290474 NM_176843 ENSMUSG00000071652 Ints5 1110055N21Rik|mKIAA1698 integrator complex subunit 5 protein-coding common_peak2_68_48_0.208979059908501_5.71919937406946_0.468749305398715-3 chr3 152346482 152347220 + 0.468749305398715 NA intron (NM_001355666, intron 1 of 21) CpG 373 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding common_peak1_125_116_-0.184049400909814_6.7783400191285_0.468698791045168 chr17 46247664 46248695 + 0.468698791045168 NA promoter-TSS (NM_145353) promoter-TSS (NM_145353) 99 NM_145353 28064 Mm.248769 NM_145353 ENSMUSG00000071074 Yipf3 C6orf109|D17Wsu94e|KLIP1 Yip1 domain family, member 3 protein-coding common_peak1_88_84_-0.221083709737774_6.29884908126881_0.468522704650658 chr17 78200321 78202168 + 0.468522704650658 NA intron (NM_015800, intron 1 of 16) CpG 996 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak2_88_84_-0.221083709737774_6.29884908126881_0.468522704650658-2 chr3 137867146 137868221 + 0.468522704650658 NA promoter-TSS (NM_001033155) promoter-TSS (NM_001033155) 8 NM_001033155 70604 Mm.256488 NM_001033155 ENSMUSG00000074212 Dnajb14 5730496F10Rik DnaJ heat shock protein family (Hsp40) member B14 protein-coding common_peak2_88_84_-0.221083709737774_6.29884908126881_0.468522704650658 chr15 58822499 58823386 + 0.468522704650658 NA exon (NM_175212, exon 1 of 7) exon (NM_175212, exon 1 of 7) 485 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak1_102_73_0.188133999429277_6.30352036534359_0.468522704650658 chr13 114457920 114458908 + 0.468522704650658 NA intron (NM_001301375, intron 1 of 5) intron (NM_001301375, intron 1 of 5) 537 NM_001301373 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding common_peak2_219_196_-0.137329477251925_7.55338708083041_0.468435503032558 chr3 104863613 104865298 + 0.468435503032558 NA promoter-TSS (NM_001355044) promoter-TSS (NM_001355044) 50 NM_009797 12340 Mm.19142 NM_009797 ENSMUSG00000070372 Capza1 CAPZ|CAZ1|Cappa1|capZ alpha-1 capping protein (actin filament) muscle Z-line, alpha 1 protein-coding common_peak1_84_60_0.191695438954199_6.02658505703999_0.468231456109363-2 chr17 56764354 56765216 + 0.468231456109363 NA promoter-TSS (NM_144858) promoter-TSS (NM_144858) 34 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak2_84_60_0.191695438954199_6.02658505703999_0.468231456109363-2 chr16 24428438 24429337 + 0.468231456109363 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -19204 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_85_60_0.208450213073302_6.03496244409954_0.468231456109363 chr5 140767695 140768437 + 0.468231456109363 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 43939 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding common_peak1_85_60_0.208450213073302_6.03496244409954_0.468231456109363-2 chr19 32389191 32389974 + 0.468231456109363 NA intron (NR_033198, intron 1 of 1) CpG-7452 366 NR_033198 67188 Mm.391160 NR_033198 ENSMUSG00000097787 2700046G09Rik - RIKEN cDNA 2700046G09 gene ncRNA common_peak2_84_60_0.191695438954199_6.02658505703999_0.468231456109363-3 chr16 91372673 91373467 + 0.468231456109363 NA 5' UTR (NM_001110498, exon 1 of 7) 5' UTR (NM_001110498, exon 1 of 7) 287 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak1_84_60_0.191695438954199_6.02658505703999_0.468231456109363 chr10 13964609 13965651 + 0.468231456109363 NA promoter-TSS (NM_001358783) promoter-TSS (NM_001358783) -945 NM_001358783 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_85_60_0.208450213073302_6.03496244409954_0.468231456109363 chr17 46650135 46651123 + 0.468231456109363 NA TTS (NM_001316742) TTS (NM_001316742) 291 NM_025611 66515 Mm.329078 NM_025611 ENSMUSG00000038545 Cul7 2510004L20Rik|AA409809|C230011P08Rik|p185|p193 cullin 7 protein-coding common_peak2_84_60_0.191695438954199_6.02658505703999_0.468231456109363 chr10 94546164 94546930 + 0.468231456109363 NA intron (NM_172051, intron 1 of 3) MER5B|DNA|hAT-Charlie -4325 NM_001359761 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_84_60_0.191695438954199_6.02658505703999_0.468231456109363-4 chr6 98954830 98955852 + 0.468231456109363 NA intron (NM_001197321, intron 10 of 17) (CAAAAA)n|Simple_repeat|Simple_repeat 72957 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_72_70_-0.245331683938756_6.0270812775353_0.468231456109351-2 chr4 114600631 114601653 + 0.468231456109351 NA intron (NM_001085549, intron 5 of 6) intron (NM_001085549, intron 5 of 6) 194418 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak2_72_70_-0.245331683938756_6.0270812775353_0.468231456109351 chr11 67921525 67922558 + 0.468231456109351 NA exon (NM_001291049, exon 1 of 15) exon (NM_001291049, exon 1 of 15) 112 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding common_peak1_72_70_-0.245331683938756_6.0270812775353_0.468231456109351 chr19 10602538 10603132 + 0.468231456109351 NA intron (NM_145496, intron 1 of 16) intron (NM_145496, intron 1 of 16) 1423 NM_145496 225913 Mm.374868 NM_145496 ENSMUSG00000034371 Tkfc BC021917|Dak triokinase, FMN cyclase protein-coding common_peak1_188_139_0.137867903956079_7.19821696892301_0.467854205590889 chr15 89373271 89374679 + 0.467854205590889 NA promoter-TSS (NM_001111288) promoter-TSS (NM_001111288) -157 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding common_peak2_170_154_-0.152344725847424_7.19995204235053_0.467854205590889 chr4 124850140 124851586 + 0.467854205590889 NA promoter-TSS (NM_001142727) promoter-TSS (NM_001142727) 104 NM_153566 230734 Mm.258568 NM_153566 ENSMUSG00000028889 Yrdc AV303379|BC023823|IRIP|ITIP yrdC domain containing (E.coli) protein-coding common_peak1_214_159_0.12986137492946_7.38685878235209_0.46752991942446 chr19 8774132 8775273 + 0.46752991942446 NA promoter-TSS (NR_028418) promoter-TSS (NR_028418) 217 NR_015538 100039957 Mm.220886 NR_015538 Gm2518 D630022E15Rik interferon induced transmembrane protein 2 pseudogene pseudo common_peak2_106_100_-0.206045445722636_6.55518875989048_0.467468668135477 chr10 86269965 86271531 + 0.467468668135477 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -29664 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_106_100_-0.206045445722636_6.55518875989048_0.467468668135477 chr13 73763722 73764914 + 0.467468668135477 NA intron (NM_001360694, intron 1 of 24) intron (NM_001360694, intron 1 of 24) 621 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_121_88_0.164367658763235_6.55791726034801_0.467468668135477 chr8 120535984 120537215 + 0.467468668135477 NA promoter-TSS (NM_001145896) promoter-TSS (NM_001145896) 742 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_107_100_-0.19271961142488_6.56185167703936_0.467468668135477 chr11 77077961 77079052 + 0.467468668135477 NA promoter-TSS (NR_030756) promoter-TSS (NR_030756) -69 NM_001012309 237859 Mm.156195 NM_001012309 ENSMUSG00000037958 Nsrp1 8030451K07|AI851076|AL022898|Ccdc55|NSpr70|NSrp70 nuclear speckle regulatory protein 1 protein-coding common_peak1_126_117_-0.185003427787926_6.79014133546788_0.467179664368446 chr4 143160653 143162179 + 0.467179664368446 NA intron (NM_001256380, intron 6 of 7) intron (NM_001256380, intron 6 of 7) -25254 NR_105988 102465618 NR_105988 ENSMUSG00000106597 Mir7021 mmu-mir-7021 microRNA 7021 ncRNA common_peak2_126_117_-0.185003427787926_6.79014133546788_0.467179664368446 chr6 70812676 70814014 + 0.467179664368446 NA Intergenic B1_Mur1|SINE|Alu -21170 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_55_38_0.239241895356431_5.40502316654046_0.466726531031556 chr11 116104351 116104907 + 0.466726531031556 NA Intergenic Intergenic 5606 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-3 chr9 66974999 66975371 + 0.466726531031556 NA exon (NM_030717, exon 1 of 6) exon (NM_030717, exon 1 of 6) 299 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak2_55_38_0.239241895356431_5.40502316654046_0.466726531031556-4 chr5 151187630 151188441 + 0.466726531031556 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 2158 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_55_38_0.239241895356431_5.40502316654046_0.466726531031556-3 chr5 93129460 93129991 + 0.466726531031556 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 36309 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-2 chr3 37722609 37723355 + 0.466726531031556 NA intron (NM_198657, intron 1 of 2) intron (NM_198657, intron 1 of 2) 1378 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_55_38_0.239241895356431_5.40502316654046_0.466726531031556 chr11 120467701 120468100 + 0.466726531031556 NA promoter-TSS (NM_197995) promoter-TSS (NM_197995) 265 NM_001159328 15239 Mm.7919 NM_008244 ENSMUSG00000025793 Hgs Hgr|Hrs|ZFYVE8|tn HGF-regulated tyrosine kinase substrate protein-coding common_peak1_45_46_-0.311735549881383_5.39872107673695_0.466726531031556 chr11 116218402 116218841 + 0.466726531031556 NA intron (NR_004853, intron 6 of 6) intron (NR_004853, intron 6 of 6) 2619 NR_004853 69681 Mm.33677 NR_004853 ENSMUSG00000092300 Cdk3-ps 2310050O10Rik|Cdk3 cyclin-dependent kinase 3, pseudogene pseudo common_peak1_55_38_0.239241895356431_5.40502316654046_0.466726531031556-3 chr19 16254812 16255314 + 0.466726531031556 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 59941 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_55_38_0.239241895356431_5.40502316654046_0.466726531031556-4 chr2 61294863 61295619 + 0.466726531031556 NA Intergenic Intergenic -283345 NM_011529 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak2_55_38_0.239241895356431_5.40502316654046_0.466726531031556-5 chr9 88274426 88275116 + 0.466726531031556 NA Intergenic Intergenic -52838 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_45_46_-0.311735549881383_5.39872107673695_0.466726531031556 chr1 91024404 91025322 + 0.466726531031556 NA intron (NM_001111312, intron 1 of 12) B1_Mus1|SINE|Alu 26136 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-3 chr1 181741602 181742138 + 0.466726531031556 NA Intergenic Intergenic 100531 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_55_38_0.239241895356431_5.40502316654046_0.466726531031556-5 chr8 60648306 60649004 + 0.466726531031556 NA intron (NM_001293769, intron 1 of 1) intron (NM_001293769, intron 1 of 1) -6449 NM_001177881 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-4 chr15 36938200 36938750 + 0.466726531031556 NA Intergenic Intergenic 68927 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak2_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-2 chr1 168430128 168431078 + 0.466726531031556 NA intron (NM_183355, intron 1 of 8) intron (NM_183355, intron 1 of 8) 1566 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_55_38_0.239241895356431_5.40502316654046_0.466726531031556 chr4 62408891 62409580 + 0.466726531031556 NA promoter-TSS (NM_139291) promoter-TSS (NM_139291) 452 NM_027297 70052 Mm.30660 NM_027297 ENSMUSG00000066148 Prpf4 1600015H11Rik|AI874830|AW047464|bN189G18.1 pre-mRNA processing factor 4 protein-coding common_peak1_55_38_0.239241895356431_5.40502316654046_0.466726531031556-2 chr12 28751827 28752378 + 0.466726531031556 NA intron (NM_201357, intron 1 of 8) intron (NM_201357, intron 1 of 8) 274 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Eipr1 D12Ertd604e|Tssc1 EARP complex and GARP complex interacting protein 1 protein-coding common_peak2_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-5 chr6 35542102 35542631 + 0.466726531031556 NA Intergenic Intergenic -2478 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak2_55_38_0.239241895356431_5.40502316654046_0.466726531031556-2 chr18 4375580 4376012 + 0.466726531031556 NA intron (NM_026157, intron 1 of 8) CpG 204 NM_001361009 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak2_45_46_-0.311735549881383_5.39872107673695_0.466726531031556-6 chr6 94699349 94700041 + 0.466726531031556 NA 5' UTR (NM_008377, exon 1 of 19) 5' UTR (NM_008377, exon 1 of 19) 450 NM_001355269 16206 Mm.245210 NM_008377 ENSMUSG00000030029 Lrig1 D6Bwg0781e|Img|LIG-1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding common_peak1_89_85_-0.221951586848759_6.31528896127772_0.466412485092343 chr17 14336674 14337767 + 0.466412485092343 NA intron (NM_022315, intron 3 of 12) intron (NM_022315, intron 3 of 12) 57714 NM_022315 64074 Mm.30162 NM_022315 ENSMUSG00000023886 Smoc2 1700056C05Rik|5430426J21Rik|Smoc2l SPARC related modular calcium binding 2 protein-coding common_peak1_103_74_0.182609524812744_6.32012345290225_0.466412485092343-2 chr8 70283131 70283794 + 0.466412485092343 NA intron (NM_001146153, intron 1 of 9) CpG 463 NM_001146153 26558 Mm.388127 NM_011984 ENSMUSG00000003573 Homer3 AW146114 homer scaffolding protein 3 protein-coding common_peak2_103_74_0.182609524812744_6.32012345290225_0.466412485092343 chr5 52189914 52190502 + 0.466412485092343 NA promoter-TSS (NR_015537) promoter-TSS (NR_015537) 338 NR_104311 13204 Mm.993 NM_007839 ENSMUSG00000029169 Dhx15 DBP1|DEAH9|Ddx15|HRH2|mDEAH9 DEAH (Asp-Glu-Ala-His) box polypeptide 15 protein-coding common_peak1_103_74_0.182609524812744_6.32012345290225_0.466412485092343 chr15 76242849 76243827 + 0.466412485092343 NA 5' UTR (NM_001163576, exon 1 of 10) 5' UTR (NM_001163576, exon 1 of 10) 102 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding common_peak1_272_204_0.114442767604763_7.73670148330783_0.466233413686686 chr3 121646179 121648560 + 0.466233413686686 NA promoter-TSS (NR_036458) promoter-TSS (NR_036458) -916 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-3 chr10 80098418 80098992 + 0.466170754204149 NA intron (NM_001359637, intron 1 of 3) intron (NM_001359637, intron 1 of 3) 2482 NM_001359635 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-5 chr12 29998648 29998892 + 0.466170754204149 NA intron (NM_181395, intron 14 of 22) intron (NM_181395, intron 14 of 22) 60734 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-8 chr5 53948690 53949043 + 0.466170754204149 NA Intergenic Intergenic -49657 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-16 chr8 86874064 86874392 + 0.466170754204149 NA intron (NM_030563, intron 1 of 6) B3A|SINE|B2 11030 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-14 chr5 26820664 26820887 + 0.466170754204149 NA intron (NM_010075, intron 1 of 25) intron (NM_010075, intron 1 of 25) 3418 NM_010075 13483 Mm.42078 NM_010075 ENSMUSG00000061576 Dpp6 B930011P16Rik|D5Buc3|D5Buc4|D5Buc5|DPP VI|Dpp-6|Gm1377|In(5)6H-p|Peplb|Rw dipeptidylpeptidase 6 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-9 chr3 52677714 52678197 + 0.466170754204149 NA Intergenic MLT1G|LTR|ERVL-MaLR -61769 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-12 chr9 107975494 107975766 + 0.466170754204149 NA promoter-TSS (NM_023738) promoter-TSS (NM_023738) 63 NM_023738 74153 Mm.277125 NM_023738 ENSMUSG00000032596 Uba7 1300004C08Rik|Ube1l ubiquitin-like modifier activating enzyme 7 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-5 chr13 53584244 53584613 + 0.466170754204149 NA Intergenic Intergenic 54773 NR_131079 77398 Mm.174307 NR_131079 ENSMUSG00000113599 9530014B07Rik - RIKEN cDNA 9530014B07 gene ncRNA unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149 chr1 23256644 23257019 + 0.466170754204149 NA Intergenic CpG -15438 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-7 chr15 102105298 102105515 + 0.466170754204149 NA intron (NM_001355636, intron 3 of 28) intron (NM_001355636, intron 3 of 28) 2472 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-2 chr10 21609043 21609382 + 0.466170754204149 NA intron (NR_027968, intron 2 of 2) intron (NR_027968, intron 2 of 2) 16067 NR_027968 67692 Mm.54306 NM_183266 ENSMUSG00000050844 1700020N01Rik - RIKEN cDNA 1700020N01 gene ncRNA common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-2 chr1 161036512 161036818 + 0.466170754204149 NA intron (NR_153815, intron 5 of 8) intron (NR_153815, intron 5 of 8) -1427 NR_028543 100217446 NR_028543 ENSMUSG00000064968 Snord47 MBII-96 small nucleolar RNA, C/D box 47 snoRNA unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-13 chr4 150375358 150375950 + 0.466170754204149 NA intron (NM_001085492, intron 1 of 22) PB1D10|SINE|Alu 93738 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-7 chr17 15526768 15527178 + 0.466170754204149 NA intron (NM_008799, intron 1 of 5) CpG 328 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-3 chr14 76740234 76740570 + 0.466170754204149 NA Intergenic Intergenic -19729 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-20 chr9 50900421 50900649 + 0.466170754204149 NA intron (NM_178710, intron 9 of 15) intron (NM_178710, intron 9 of 15) 43611 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-18 chr9 124282318 124282585 + 0.466170754204149 NA Intergenic Intergenic 30243 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-3 chr12 16810993 16811217 + 0.466170754204149 NA non-coding (NR_027677, exon 1 of 8) non-coding (NR_027677, exon 1 of 8) 140 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding unique_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-3 chr8 70490894 70491136 + 0.466170754204149 NA Intergenic Intergenic -2116 NM_018827 12931 Mm.335584 NM_018827 ENSMUSG00000007888 Crlf1 CLF-1|CRLM-3|CRLM3|NR6|NR6.1 cytokine receptor-like factor 1 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-18 chr9 54802697 54802994 + 0.466170754204149 NA Intergenic Intergenic 38097 NM_001284507 12903 Mm.34797 NM_013496 ENSMUSG00000032291 Crabp1 AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5 cellular retinoic acid binding protein I protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-21 chr9 54802711 54803022 + 0.466170754204149 NA Intergenic Intergenic 38118 NM_001284507 12903 Mm.34797 NM_013496 ENSMUSG00000032291 Crabp1 AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5 cellular retinoic acid binding protein I protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-16 chr7 80835840 80836120 + 0.466170754204149 NA Intergenic Intergenic -26128 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-9 chr14 54383231 54383550 + 0.466170754204149 NA intron (NM_011405, intron 4 of 11) intron (NM_011405, intron 4 of 11) 22549 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-14 chr7 28357321 28357607 + 0.466170754204149 NA Intergenic Intergenic 5924 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-9 chr2 153649758 153650065 + 0.466170754204149 NA intron (NM_001271744, intron 1 of 22) CpG 462 NM_001271747 13436 Mm.89772 NM_010068 ENSMUSG00000027478 Dnmt3b MmuIIIB DNA methyltransferase 3B protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-9 chr2 30133846 30134247 + 0.466170754204149 NA intron (NM_146252, intron 1 of 11) intron (NM_146252, intron 1 of 11) 300 NM_146252 70296 Mm.19172 NM_146252 ENSMUSG00000039678 Tbc1d13 2600014A06Rik|BC025586 TBC1 domain family, member 13 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-17 chr7 80370988 80371276 + 0.466170754204149 NA 5' UTR (NM_172903, exon 1 of 24) 5' UTR (NM_172903, exon 1 of 24) 243 NM_172903 140481 Mm.269245 NM_172903 ENSMUSG00000038886 Man2a2 1700052O22Rik|4931438M07Rik|AI480988|MX|Man IIx mannosidase 2, alpha 2 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-7 chr13 28916488 28916752 + 0.466170754204149 NA Intergenic Intergenic -31198 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-2 chr10 91229639 91229897 + 0.466170754204149 NA Intergenic Intergenic -9149 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-7 chr15 53102651 53103006 + 0.466170754204149 NA intron (NM_010162, intron 3 of 10) intron (NM_010162, intron 3 of 10) 243355 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-17 chr9 67834869 67835082 + 0.466170754204149 NA Intergenic Intergenic -2645 NM_001163143 244911 Mm.325849 NM_001163143 ENSMUSG00000047990 C2cd4a EG244911|Fam148a C2 calcium-dependent domain containing 4A protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-6 chr19 37886471 37886743 + 0.466170754204149 NA Intergenic Intergenic 156970 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-10 chr4 59581783 59582118 + 0.466170754204149 NA intron (NM_024255, intron 1 of 10) CpG 387 NM_024255 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-19 chr8 94036061 94036479 + 0.466170754204149 NA promoter-TSS (NM_177767) promoter-TSS (NM_177767) 769 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-4 chr12 111569133 111569445 + 0.466170754204149 NA Intergenic RSINE1|SINE|B4 5113 NR_045295 100504687 Mm.26072 NR_045295 ENSMUSG00000096995 2810029C07Rik AU017849 RIKEN cDNA 2810029C07 gene ncRNA common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-5 chr11 84513724 84513945 + 0.466170754204149 NA promoter-TSS (NM_019816) promoter-TSS (NM_019816) -333 NM_019816 56321 Mm.257482 NM_019816 ENSMUSG00000018697 Aatf 4933415H02Rik|5830465M17Rik|Che-1|Trb apoptosis antagonizing transcription factor protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-10 chr3 145615326 145615721 + 0.466170754204149 NA Intergenic Intergenic 34462 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-15 chr5 92505268 92505585 + 0.466170754204149 NA 5' UTR (NM_007644, exon 1 of 12) 5' UTR (NM_007644, exon 1 of 12) 231 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-22 chr9 108263438 108263704 + 0.466170754204149 NA 5' UTR (NM_001276481, exon 1 of 3) 5' UTR (NM_001276481, exon 1 of 3) 244 NM_001276493 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149 chr10 14018235 14018591 + 0.466170754204149 NA intron (NM_001358783, intron 2 of 12) intron (NM_001358783, intron 2 of 12) 52034 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-15 chr3 107863543 107863807 + 0.466170754204149 NA Intergenic Intergenic -13555 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-4 chr11 69685906 69686149 + 0.466170754204149 NA promoter-TSS (NM_023517) promoter-TSS (NM_023517) -473 NM_023517 69583 Mm.8983 NM_023517 ENSMUSG00000089669 Tnfsf13 2310026N09Rik|April|Tall2|Tnlg7b|Trdl1 tumor necrosis factor (ligand) superfamily, member 13 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149 chr10 7118236 7118463 + 0.466170754204149 NA TTS (NM_172546) TTS (NM_172546) 93888 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-9 chr5 100607796 100608216 + 0.466170754204149 NA Intergenic Intergenic -35801 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-17 chr8 126698670 126698922 + 0.466170754204149 NA Intergenic Intergenic -105360 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-8 chr15 22732814 22733170 + 0.466170754204149 NA Intergenic Intergenic -18008 NM_001165971 545091 Mm.475598 NM_001165971 Hnrnpa1l2-ps2 EG545091|Gm5803 heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-2 chr10 12787253 12787830 + 0.466170754204149 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 74194 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-8 chr16 45965098 45965371 + 0.466170754204149 NA intron (NM_001134480, intron 3 of 3) intron (NM_001134480, intron 3 of 3) 19628 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-18 chr7 112225405 112225607 + 0.466170754204149 NA promoter-TSS (NM_177282) promoter-TSS (NM_177282) -330 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-6 chr12 104899835 104900084 + 0.466170754204149 NA Intergenic Intergenic -34883 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-15 chr7 66577458 66577845 + 0.466170754204149 NA Intergenic Intergenic 111910 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-3 chr8 70723182 70723451 + 0.466170754204149 NA promoter-TSS (NM_001310465) promoter-TSS (NM_001310465) -748 NM_001310465 110385 Mm.255180 NM_201607 ENSMUSG00000031842 Pde4c Dpde1|E130301F19Rik|dunce phosphodiesterase 4C, cAMP specific protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-16 chr6 50377479 50377720 + 0.466170754204149 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 5238 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-16 chr4 89383231 89383582 + 0.466170754204149 NA non-coding (NR_132431, exon 3 of 10) non-coding (NR_132431, exon 3 of 10) -72374 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-8 chr19 7342016 7342243 + 0.466170754204149 NA promoter-TSS (NM_007928) promoter-TSS (NM_007928) -269 NM_001080388 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-10 chr14 56690038 56690384 + 0.466170754204149 NA intron (NR_153396, intron 9 of 12) intron (NR_153396, intron 9 of 12) 10789 NR_046209 100503823 Mm.474486 NR_046209 Gm16973 - predicted gene, 16973 ncRNA unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-4 chr15 37769568 37769965 + 0.466170754204149 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) 22234 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-4 chr12 112644968 112645229 + 0.466170754204149 NA intron (NM_001161737, intron 1 of 2) CpG 270 NM_013929 30954 Mm.289812 NM_013929 ENSMUSG00000064326 Siva1 CD27bp|Siva SIVA1, apoptosis-inducing factor protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-11 chr16 97288083 97288494 + 0.466170754204149 NA Intergenic Intergenic -68440 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-12 chr9 70631979 70632359 + 0.466170754204149 NA intron (NM_172772, intron 3 of 8) intron (NM_172772, intron 3 of 8) 25005 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Mindy2 AI465301|B230380D07Rik|Fam63b|mKIAA1164 MINDY lysine 48 deubiquitinase 2 protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149 chr1 132338898 132339190 + 0.466170754204149 NA Intergenic Intergenic 22919 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-4 chr11 98932401 98932796 + 0.466170754204149 NA Intergenic Intergenic -5098 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-12 chr17 47296715 47296934 + 0.466170754204149 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 66594 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-10 chr3 9547066 9547528 + 0.466170754204149 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 62788 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-12 chr4 58552896 58553155 + 0.466170754204149 NA intron (NM_010336, intron 1 of 3) CpG 268 NM_172989 14745 Mm.4772 NM_010336 ENSMUSG00000038668 Lpar1 AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1 lysophosphatidic acid receptor 1 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-7 chr2 166448704 166449051 + 0.466170754204149 NA intron (NR_015558, intron 1 of 2) intron (NR_015558, intron 1 of 2) 1426 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA unique_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-2 chr19 59844628 59844944 + 0.466170754204149 NA Intergenic Intergenic 98578 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-13 chr7 25707919 25708301 + 0.466170754204149 NA Intergenic Intergenic 10943 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-10 chr6 89000598 89000984 + 0.466170754204149 NA Intergenic Intergenic -95319 NR_134978 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-17 chr8 109608534 109608770 + 0.466170754204149 NA promoter-TSS (NM_020046) promoter-TSS (NM_020046) 21 NM_020046 56749 Mm.23894 NM_020046 ENSMUSG00000031730 Dhodh 2810417D19Rik|AI834883 dihydroorotate dehydrogenase protein-coding unique_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149 chr10 39983725 39983979 + 0.466170754204149 NA intron (NM_001113385, intron 1 of 3) intron (NM_001113385, intron 1 of 3) 2794 NM_001113385 215928 Mm.31744 NM_001001489 ENSMUSG00000038528 Mfsd4b5 Naglt1c major facilitator superfamily domain containing 4B5 protein-coding unique_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149 chr12 51348378 51348630 + 0.466170754204149 NA intron (NM_001015099, intron 1 of 14) CpG 274 NM_001015099 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-3 chr11 20200702 20201047 + 0.466170754204149 NA promoter-TSS (NM_008996) promoter-TSS (NM_008996) -538 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-11 chr7 112213385 112213825 + 0.466170754204149 NA Intergenic Intergenic -12231 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-15 chr5 139910589 139910909 + 0.466170754204149 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 2806 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-9 chr15 25877626 25877980 + 0.466170754204149 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 34505 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-6 chr15 94543096 94543383 + 0.466170754204149 NA promoter-TSS (NM_029926) promoter-TSS (NM_029926) 268 NM_172437 78895 Mm.34344 NM_172437 ENSMUSG00000033356 Pus7l 3000003F02Rik pseudouridylate synthase 7-like protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-6 chr14 28664552 28664788 + 0.466170754204149 NA Intergenic Intergenic 153265 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-6 chr12 79253710 79253922 + 0.466170754204149 NA intron (NM_001008550, intron 29 of 41) intron (NM_001008550, intron 29 of 41) 42466 NM_001008550 211978 Mm.297919 NM_001008550 ENSMUSG00000066440 Zfyve26 4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321 zinc finger, FYVE domain containing 26 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-4 chr12 86001012 86001374 + 0.466170754204149 NA intron (NM_001347395, intron 30 of 32) intron (NM_001347395, intron 30 of 32) 77848 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-10 chr15 43281511 43281910 + 0.466170754204149 NA intron (NM_008388, intron 1 of 12) intron (NM_008388, intron 1 of 12) 1026 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-11 chr4 32521122 32521338 + 0.466170754204149 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 50432 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-13 chr19 18766779 18767078 + 0.466170754204149 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 16945 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-5 chr15 31223931 31224118 + 0.466170754204149 NA promoter-TSS (NM_146057) promoter-TSS (NM_146057) -361 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-2 chr10 111685336 111685723 + 0.466170754204149 NA Intergenic Intergenic -91256 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-3 chr10 17727290 17727591 + 0.466170754204149 NA Intergenic Intergenic 4212 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-14 chr4 133369917 133370153 + 0.466170754204149 NA TTS (NR_039582) TTS (NR_039582) 259 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-11 chr3 27474629 27474923 + 0.466170754204149 NA intron (NM_001356953, intron 12 of 26) intron (NM_001356953, intron 12 of 26) 103425 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|GHRP|GHS-R|Ghsr1a growth hormone secretagogue receptor protein-coding common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-3 chr10 95779289 95779494 + 0.466170754204149 NA Intergenic Intergenic -161272 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-7 chr13 31206775 31207117 + 0.466170754204149 NA Intergenic Intergenic 34140 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149 chr1 45623110 45623573 + 0.466170754204149 NA Intergenic Intergenic -120059 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding unique_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-2 chr6 108455249 108455436 + 0.466170754204149 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -34401 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149 chr1 64004744 64005104 + 0.466170754204149 NA Intergenic Intergenic 37577 NR_105864 102466760 NR_105864 ENSMUSG00000098487 Mir6899 Gm27384|mmu-mir-6899 microRNA 6899 ncRNA common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-14 chr2 117455936 117456222 + 0.466170754204149 NA Intergenic Intergenic -113202 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-8 chr13 111807683 111807944 + 0.466170754204149 NA intron (NM_011945, intron 1 of 19) CpG 1180 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-6 chr16 8666909 8667101 + 0.466170754204149 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 5148 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-2 chr12 71925914 71926427 + 0.466170754204149 NA intron (NM_026102, intron 3 of 25) intron (NM_026102, intron 3 of 25) 36627 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-11 chr19 3903317 3903623 + 0.466170754204149 NA intron (NM_001136091, intron 4 of 19) intron (NM_001136091, intron 4 of 19) 1760 NM_016921 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-12 chr3 65301014 65301430 + 0.466170754204149 NA intron (NM_001357358, intron 5 of 13) intron (NM_001357358, intron 5 of 13) 1463 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-11 chr7 67647570 67647862 + 0.466170754204149 NA 5' UTR (NM_001168475, exon 1 of 11) 5' UTR (NM_001168475, exon 1 of 11) 306 NM_001360653 67009 Mm.249356 NM_025905 ENSMUSG00000030555 Ttc23 1600012K10Rik tetratricopeptide repeat domain 23 protein-coding unique_peak1_22_14_0.34301768576098_4.07839943848901_0.466170754204149-8 chr16 15252018 15252537 + 0.466170754204149 NA Intergenic Intergenic 342241 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-12 chr6 137648812 137649135 + 0.466170754204149 NA intron (NM_007945, intron 1 of 21) CpG 312 NM_001271588 13860 Mm.235346 NM_007945 ENSMUSG00000015766 Eps8 AW261790 epidermal growth factor receptor pathway substrate 8 protein-coding common_peak1_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-5 chr14 121712998 121713225 + 0.466170754204149 NA intron (NM_134074, intron 1 of 52) intron (NM_134074, intron 1 of 52) -14694 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak2_16_19_-0.505042257977667_4.06940696589853_0.466170754204149-5 chr19 5818435 5818791 + 0.466170754204149 NA Intergenic Intergenic -15941 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_22_14_0.34301768576098_4.07839943848901_0.466170754204149-13 chr4 95026376 95026870 + 0.466170754204149 NA Intergenic Intergenic 25599 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_148_136_-0.17153468643526_7.0122647397429_0.466075619126616 chr2 117902536 117903779 + 0.466075619126616 NA intron (NR_040631, intron 4 of 5) intron (NR_040631, intron 4 of 5) 81229 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_122_89_0.159942073498218_6.57182413307878_0.465714334227052-2 chr8 13757322 13758111 + 0.465714334227052 NA promoter-TSS (NM_001357247) promoter-TSS (NM_001357247) 60 NM_001357247 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak1_122_89_0.159942073498218_6.57182413307878_0.465714334227052 chr2 30719561 30720888 + 0.465714334227052 NA promoter-TSS (NR_037272) promoter-TSS (NR_037272) -986 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_122_89_0.159942073498218_6.57182413307878_0.465714334227052 chr4 8535719 8536816 + 0.465714334227052 NA intron (NM_021518, intron 1 of 7) CpG 623 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak1_108_101_-0.193730456843049_6.57556011354997_0.465714334227027-2 chr10 111009560 111010522 + 0.465714334227027 NA promoter-TSS (NM_172554) promoter-TSS (NM_172554) 25 NM_001359624 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|DHHC-17|Hip14 zinc finger, DHHC domain containing 17 protein-coding common_peak1_108_101_-0.193730456843049_6.57556011354997_0.465714334227027 chr1 37429282 37430844 + 0.465714334227027 NA promoter-TSS (NM_001356528) promoter-TSS (NM_001356528) 40 NM_198006 76178 Mm.28085 NM_198006 ENSMUSG00000026112 Coa5 1700001A24Rik|6330578E17Rik|Pet191 cytochrome C oxidase assembly factor 5 protein-coding common_peak2_86_61_0.201552313217846_6.0549724669958_0.465693198848476 chr1 191717634 191718217 + 0.465693198848476 NA promoter-TSS (NM_172266) promoter-TSS (NM_172266) -99 NM_172266 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak1_86_61_0.201552313217846_6.0549724669958_0.465693198848476-2 chr4 43963782 43965065 + 0.465693198848476 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 6721 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_86_61_0.201552313217846_6.0549724669958_0.465693198848476 chr16 4880757 4881238 + 0.465693198848476 NA Intergenic CpG -1146 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak2_73_71_-0.246019239958114_6.04691538146326_0.465693198848464-3 chr5 38561871 38562616 + 0.465693198848464 NA promoter-TSS (NM_011715) promoter-TSS (NM_011715) -648 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak2_73_71_-0.246019239958114_6.04691538146326_0.465693198848464-2 chr13 29502127 29502732 + 0.465693198848464 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 353244 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak1_73_71_-0.246019239958114_6.04691538146326_0.465693198848464-2 chr15 78406278 78406883 + 0.465693198848464 NA promoter-TSS (NM_001162493) promoter-TSS (NM_001162493) -132 NM_001162493 246221 Mm.294215 NM_138670 ENSMUSG00000071711 Mpst Mst mercaptopyruvate sulfurtransferase protein-coding common_peak2_73_71_-0.246019239958114_6.04691538146326_0.465693198848464 chr12 8500174 8501001 + 0.465693198848464 NA promoter-TSS (NM_007483) promoter-TSS (NM_007483) -578 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak1_73_71_-0.246019239958114_6.04691538146326_0.465693198848464 chr15 59795048 59795700 + 0.465693198848464 NA promoter-TSS (NR_045076) promoter-TSS (NR_045076) -415 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_143_105_0.149680834963018_6.80276087204471_0.465687833458268 chr12 111574504 111575439 + 0.465687833458268 NA promoter-TSS (NR_045295) promoter-TSS (NR_045295) 461 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding common_peak2_144_105_0.159594485994703_6.80771769756055_0.465687833458268 chr12 112828381 112829403 + 0.465687833458268 NA 5' UTR (NM_001359292, exon 1 of 3) 5' UTR (NM_001359292, exon 1 of 3) 497 NM_001359292 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak2_59_58_-0.259165483735956_5.75306030749386_0.465606867440106-3 chr4 45502843 45503952 + 0.465606867440106 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 27431 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_59_58_-0.259165483735956_5.75306030749386_0.465606867440106 chr12 113098609 113099474 + 0.465606867440106 NA intron (NM_001346696, intron 1 of 19) intron (NM_001346696, intron 1 of 19) 763 NM_054081 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding common_peak2_59_58_-0.259165483735956_5.75306030749386_0.465606867440106-5 chr9 61370835 61371697 + 0.465606867440106 NA Intergenic CpG -1100 NM_001083928 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_59_58_-0.259165483735956_5.75306030749386_0.465606867440106-4 chr4 89523300 89524477 + 0.465606867440106 NA Intergenic Intergenic -164310 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_59_58_-0.259165483735956_5.75306030749386_0.465606867440106 chr11 32226529 32227169 + 0.465606867440106 NA intron (NM_010822, intron 1 of 3) intron (NM_010822, intron 1 of 3) 344 NM_010822 268395 Mm.263161 NM_010822 ENSMUSG00000020287 Mpg 9830006D05|AI326268|APNG|Aag|Mid1 N-methylpurine-DNA glycosylase protein-coding common_peak2_59_58_-0.259165483735956_5.75306030749386_0.465606867440106-6 chr9 102747155 102748396 + 0.465606867440106 NA intron (NR_033301, intron 2 of 3) BC1_Mm|scRNA|scRNA 8127 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_59_58_-0.259165483735956_5.75306030749386_0.465606867440106-2 chr15 5513251 5514119 + 0.465606867440106 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 17367 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_70_49_0.220764551932007_5.75423846574073_0.465606867440093 chr1 162126817 162127866 + 0.465606867440093 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -90282 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_70_49_0.220764551932007_5.75423846574073_0.465606867440093-2 chr11 106036924 106037465 + 0.465606867440093 NA exon (NM_027946, exon 1 of 7) exon (NM_027946, exon 1 of 7) 322 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak2_70_49_0.220764551932007_5.75423846574073_0.465606867440093 chr19 41455793 41456464 + 0.465606867440093 NA Intergenic Lx7|LINE|L1 -69124 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak2_172_156_-0.154183709024772_7.21752889437924_0.46560548835892 chr8 94301096 94302030 + 0.46560548835892 NA intron (NM_001357268, intron 7 of 20) intron (NM_001357268, intron 7 of 20) -22748 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak2_217_161_0.131789902670577_7.40574495421991_0.465558023409884 chr6 113306878 113308090 + 0.465558023409884 NA 5' UTR (NM_001282126, exon 1 of 13) 5' UTR (NM_001282126, exon 1 of 13) 347 NM_001282126 78783 Mm.356059 NM_030178 ENSMUSG00000001632 Brpf1 4833438B11Rik|4930540D11Rik|Brpf2 bromodomain and PHD finger containing, 1 protein-coding common_peak2_196_177_-0.149195068891722_7.40113589652054_0.465558023409834 chr4 155490762 155492654 + 0.465558023409834 NA intron (NM_001160017, intron 1 of 10) CpG 347 NM_001160016 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding common_peak2_34_36_-0.358097373083146_5.03040467908738_0.465043498729215-4 chr4 11007931 11008376 + 0.465043498729215 NA promoter-TSS (NM_175175) promoter-TSS (NM_175175) -534 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding common_peak2_34_36_-0.358097373083146_5.03040467908738_0.465043498729215 chr12 69356793 69357395 + 0.465043498729215 NA promoter-TSS (NM_025441) promoter-TSS (NM_025441) 82 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak1_34_36_-0.358097373083146_5.03040467908738_0.465043498729215-2 chr5 104381042 104381395 + 0.465043498729215 NA Intergenic Intergenic -53893 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_43_29_0.272284806988542_5.04303299910279_0.465043498729215-3 chr11 107469211 107469677 + 0.465043498729215 NA intron (NR_153311, intron 1 of 9) CpG 1276 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-4 chr11 103133414 103134056 + 0.465043498729215 NA intron (NM_027658, intron 1 of 2) intron (NM_027658, intron 1 of 2) 376 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_34_36_-0.358097373083146_5.03040467908738_0.465043498729215 chr1 92179241 92179729 + 0.465043498729215 NA intron (NM_207225, intron 1 of 26) intron (NM_207225, intron 1 of 26) 856 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_43_29_0.272284806988542_5.04303299910279_0.465043498729215-5 chr15 99343377 99343825 + 0.465043498729215 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 26881 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak2_34_36_-0.358097373083146_5.03040467908738_0.465043498729215-2 chr19 42091235 42091692 + 0.465043498729215 NA intron (NM_145501, intron 1 of 8) intron (NM_145501, intron 1 of 8) 1028 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-3 chr11 71018648 71019243 + 0.465043498729215 NA promoter-TSS (NM_025993) promoter-TSS (NM_025993) 358 NM_001291147 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak2_43_29_0.272284806988542_5.04303299910279_0.465043498729215-6 chr3 101599426 101599889 + 0.465043498729215 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 5050 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-2 chr1 93512236 93513033 + 0.465043498729215 NA intron (NM_145519, intron 1 of 26) intron (NM_145519, intron 1 of 26) 530 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding unique_peak2_34_36_-0.358097373083146_5.03040467908738_0.465043498729215 chr17 47368962 47369431 + 0.465043498729215 NA promoter-TSS (NM_183086) promoter-TSS (NM_183086) -1 NM_183086 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding common_peak1_34_36_-0.358097373083146_5.03040467908738_0.465043498729215-3 chr7 134000745 134001254 + 0.465043498729215 NA intron (NM_007400, intron 4 of 22) intron (NM_007400, intron 4 of 22) -218214 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak2_43_29_0.272284806988542_5.04303299910279_0.465043498729215 chr10 79766472 79766860 + 0.465043498729215 NA intron (NR_027505, intron 1 of 7) CpG 286 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding common_peak2_43_29_0.272284806988542_5.04303299910279_0.465043498729215-2 chr11 58903773 58904165 + 0.465043498729215 NA intron (NM_011758, intron 1 of 4) intron (NM_011758, intron 1 of 4) 256 NM_011758 22698 Mm.127646 NM_011758 ENSMUSG00000037001 Zfp39 CTfin33|Zfp-39 zinc finger protein 39 protein-coding common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-5 chr17 26496526 26497337 + 0.465043498729215 NA Intergenic Intergenic 11541 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-8 chr5 92819560 92820113 + 0.465043498729215 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 10454 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_34_36_-0.358097373083146_5.03040467908738_0.465043498729215-3 chr2 117654562 117655325 + 0.465043498729215 NA Intergenic Intergenic 157859 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-7 chr2 137728790 137729271 + 0.465043498729215 NA Intergenic Intergenic -527554 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215 chr1 45625588 45625952 + 0.465043498729215 NA Intergenic Intergenic -122488 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_43_29_0.272284806988542_5.04303299910279_0.465043498729215-4 chr14 69692722 69693102 + 0.465043498729215 NA TTS (NR_105915) TTS (NR_105915) 664 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak1_43_29_0.272284806988542_5.04303299910279_0.465043498729215-6 chr2 125302395 125302708 + 0.465043498729215 NA intron (NM_007993, intron 65 of 65) intron (NM_007993, intron 65 of 65) 55036 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak2_34_36_-0.358097373083146_5.03040467908738_0.465043498729215-5 chr6 114891651 114892318 + 0.465043498729215 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 29837 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_224_200_-0.134136604144954_7.58398338910645_0.464936458451001 chr6 47453790 47455732 + 0.464936458451001 NA promoter-TSS (NM_001355550) promoter-TSS (NM_001355550) 4 NM_001355550 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 Cul-1 cullin 1 protein-coding common_peak1_167_123_0.144228426486017_7.02631052362988_0.464804803360077 chr5 147429809 147431202 + 0.464804803360077 NA 5' UTR (NM_001359433, exon 1 of 20) 5' UTR (NM_001359433, exon 1 of 20) 349 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak1_274_206_0.110892283459003_7.74893309922883_0.464695734851945 chr8 120317124 120319472 + 0.464695734851945 NA Intergenic Intergenic -90068 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_192_142_0.137281033691803_7.22851185362429_0.464503720833508 chr6 88925243 88926943 + 0.464503720833508 NA Intergenic Intergenic 23842 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_173_157_-0.155087104145625_7.22623719610429_0.464503720833508 chr19 40461130 40463124 + 0.464503720833508 NA intron (NM_178362, intron 1 of 28) B1_Mm|SINE|Alu -10729 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_104_75_0.177209101756429_6.3365320643218_0.464354817761423 chr16 17508451 17509825 + 0.464354817761423 NA promoter-TSS (NM_001331226) promoter-TSS (NM_001331226) -74 NM_001331226 66863 Mm.161726 NM_025808 ENSMUSG00000022761 Lztr1 1200003E21Rik|AI591627|AW550890 leucine-zipper-like transcriptional regulator, 1 protein-coding common_peak1_90_86_-0.222801251392729_6.33154287015236_0.464354817761423-3 chr7 143548203 143549116 + 0.464354817761423 NA intron (NM_001285489, intron 1 of 14) CpG 169 NM_001285490 17955 Mm.294625 NM_008672 ENSMUSG00000059119 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 protein-coding common_peak2_90_86_-0.222801251392729_6.33154287015236_0.464354817761423 chr13 23738254 23739652 + 0.464354817761423 NA exon (NM_015786, exon 1 of 1) exon (NM_015786, exon 1 of 1) 146 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding common_peak1_90_86_-0.222801251392729_6.33154287015236_0.464354817761423 chr2 129205592 129206803 + 0.464354817761423 NA promoter-TSS (NM_001355252) promoter-TSS (NM_001355252) -899 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_104_75_0.177209101756429_6.3365320643218_0.464354817761423 chr14 14120177 14120963 + 0.464354817761423 NA intron (NM_025550, intron 1 of 7) CpG 334 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak1_91_86_-0.207145173625717_6.33937090903587_0.464354817761423 chr18 83817653 83818793 + 0.464354817761423 NA Intergenic Intergenic 268339 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak1_90_86_-0.222801251392729_6.33154287015236_0.464354817761423-2 chr4 141537169 141538264 + 0.464354817761423 NA intron (NM_001347235, intron 1 of 14) CpG 881 NM_001347235 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak2_104_75_0.177209101756429_6.3365320643218_0.464354817761423-2 chr3 41082116 41083011 + 0.464354817761423 NA intron (NM_027558, intron 1 of 2) CpG 483 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_91_86_-0.207145173625717_6.33937090903587_0.464354817761423 chr15 78934922 78935619 + 0.464354817761423 NA intron (NM_133800, intron 1 of 5) CpG 337 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-9 chr8 70506423 70506675 + 0.464317215211849 NA promoter-TSS (NR_151646) promoter-TSS (NR_151646) -123 NR_151646 66462 Mm.28242 NM_025577 ENSMUSG00000058833 Rex1bd 2810428I15Rik required for excision 1-B domain containing protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-4 chr13 35501585 35502028 + 0.464317215211849 NA Intergenic Intergenic -158056 NM_009881 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-9 chr7 24365067 24365406 + 0.464317215211849 NA Intergenic Intergenic -5027 NM_001163510 16534 Mm.9911 NM_008433 ENSMUSG00000054342 Kcnn4 IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-8 chr14 76875569 76875967 + 0.464317215211849 NA Intergenic Intergenic 115637 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-12 chr8 124926752 124927281 + 0.464317215211849 NA intron (NM_053207, intron 1 of 4) intron (NM_053207, intron 1 of 4) 22238 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-17 chr7 80861119 80861469 + 0.464317215211849 NA promoter-TSS (NM_009553) promoter-TSS (NM_009553) -814 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-3 chr5 34525813 34526174 + 0.464317215211849 NA intron (NM_011893, intron 1 of 12) CpG 209 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-11 chr8 60770645 60771157 + 0.464317215211849 NA Intergenic Intergenic 115344 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_32_21_0.307634365760461_4.61324880151753_0.464317215211849 chr1 132351650 132352138 + 0.464317215211849 NA Intergenic Intergenic 16054 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-9 chr14 121251724 121252166 + 0.464317215211849 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 3239 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-5 chr2 110186891 110187427 + 0.464317215211849 NA Intergenic Intergenic 118566 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-8 chr2 150136337 150136904 + 0.464317215211849 NA promoter-TSS (NM_181266) promoter-TSS (NM_181266) 58 NM_023266 104348 Mm.485851 NM_023266 ENSMUSG00000068134 Zfp120 AI315103|E030042N05Rik|F80|MZF31|Zfp844 zinc finger protein 120 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-2 chr11 3371624 3372091 + 0.464317215211849 NA promoter-TSS (NM_001361623) promoter-TSS (NM_001361623) -453 NM_173053 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849 chr1 62712642 62712901 + 0.464317215211849 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 9454 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-18 chr7 82811291 82811896 + 0.464317215211849 NA Intergenic Intergenic -55740 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding unique_peak1_24_27_-0.438001080332052_4.58835438189158_0.464317215211849 chr9 67236446 67237014 + 0.464317215211849 NA promoter-TSS (NR_029576) promoter-TSS (NR_029576) -4 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-6 chr13 60174647 60175185 + 0.464317215211849 NA 3' UTR (NM_008086, exon 1 of 1) 3' UTR (NM_008086, exon 1 of 1) 2619 NM_008086 14451 Mm.22701 NM_008086 ENSMUSG00000052957 Gas1 AW554192|Gas-1 growth arrest specific 1 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-10 chr8 104386207 104386685 + 0.464317215211849 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 9361 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-2 chr1 172242827 172243295 + 0.464317215211849 NA intron (NM_013734, intron 11 of 22) intron (NM_013734, intron 11 of 22) 15363 NM_013734 27222 Mm.482392 NM_013734 ENSMUSG00000007107 Atp1a4 - ATPase, Na+/K+ transporting, alpha 4 polypeptide protein-coding common_peak2_32_21_0.307634365760461_4.61324880151753_0.464317215211849-4 chr4 108578898 108579277 + 0.464317215211849 NA promoter-TSS (NM_011015) promoter-TSS (NM_011015) 249 NM_172697 230596 Mm.157534 NM_172697 ENSMUSG00000063800 Prpf38a 2410002M20Rik PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-10 chr15 78845335 78845774 + 0.464317215211849 NA intron (NM_027219, intron 1 of 2) intron (NM_027219, intron 1 of 2) 2907 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-2 chr13 24104377 24104742 + 0.464317215211849 NA intron (NM_026825, intron 17 of 37) intron (NM_026825, intron 17 of 37) -113345 NM_145399 214189 Mm.255667 NM_145399 ENSMUSG00000021337 Scgn - secretagogin, EF-hand calcium binding protein protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-19 chr8 72144841 72145234 + 0.464317215211849 NA intron (NM_001001491, intron 4 of 7) intron (NM_001001491, intron 4 of 7) 9745 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-8 chr7 17027432 17027851 + 0.464317215211849 NA intron (NM_011155, intron 1 of 12) CpG 273 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-3 chr17 27083332 27083580 + 0.464317215211849 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) -7789 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA unique_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-2 chr15 6260418 6260936 + 0.464317215211849 NA Intergenic Intergenic -39112 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-7 chr5 115327316 115327572 + 0.464317215211849 NA exon (NM_025573, exon 1 of 4) exon (NM_025573, exon 1 of 4) 267 NR_036616 108014 Mm.287826 NM_025573 ENSMUSG00000029538 Srsf9 25kDa|2610029M16Rik|SRp30c|Sfrs9 serine/arginine-rich splicing factor 9 protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-13 chr9 98563129 98563519 + 0.464317215211849 NA promoter-TSS (NM_015827) promoter-TSS (NM_015827) 287 NR_029444 75881 Mm.483402 NM_175227 ENSMUSG00000051074 4930579K19Rik - RIKEN cDNA 4930579K19 gene ncRNA common_peak1_24_27_-0.438001080332052_4.58835438189158_0.464317215211849 chr10 82127955 82128342 + 0.464317215211849 NA intron (NM_001163064, intron 1 of 3) CpG 135 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-15 chr6 125354241 125354627 + 0.464317215211849 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 4711 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-3 chr15 97963704 97963920 + 0.464317215211849 NA promoter-TSS (NM_001252153) promoter-TSS (NM_001252153) -417 NM_001356508 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding unique_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849 chr11 70197545 70198198 + 0.464317215211849 NA Intergenic B2_Mm2|SINE|B2 -16039 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-2 chr15 79328594 79328839 + 0.464317215211849 NA promoter-TSS (NM_001199024) promoter-TSS (NM_001199024) -345 NM_001199023 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849 chr1 177441364 177441794 + 0.464317215211849 NA promoter-TSS (NM_001355101) promoter-TSS (NM_001355101) -772 NM_001355099 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238.|zfp-238 zinc finger and BTB domain containing 18 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-11 chr16 45889915 45890257 + 0.464317215211849 NA Intergenic Intergenic -45335 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-13 chr19 7483485 7483790 + 0.464317215211849 NA promoter-TSS (NM_001271487) promoter-TSS (NM_001271487) -346 NM_001003934 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-6 chr4 105897779 105898182 + 0.464317215211849 NA Intergenic Intergenic -343233 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak2_32_21_0.307634365760461_4.61324880151753_0.464317215211849-2 chr17 27083286 27083572 + 0.464317215211849 NA intron (NM_080553, intron 2 of 57) intron (NM_080553, intron 2 of 57) -7816 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849 chr10 81544493 81544964 + 0.464317215211849 NA intron (NM_010301, intron 1 of 6) CpG 318 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-4 chr13 18717361 18717747 + 0.464317215211849 NA intron (NM_172120, intron 1 of 28) intron (NM_172120, intron 1 of 28) 262 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-16 chr7 28948566 28948939 + 0.464317215211849 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 13580 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-3 chr11 17158723 17158988 + 0.464317215211849 NA promoter-TSS (NM_024459) promoter-TSS (NM_024459) -443 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-2 chr1 132351711 132352143 + 0.464317215211849 NA Intergenic Intergenic 16021 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849 chr1 74601045 74601233 + 0.464317215211849 NA promoter-TSS (NM_175031) promoter-TSS (NM_175031) 258 NM_021313 57751 Mm.280920 NM_021313 ENSMUSG00000026171 Rnf25 0610009H16Rik|AO7 ring finger protein 25 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-12 chr18 65740078 65740475 + 0.464317215211849 NA intron (NM_177028, intron 10 of 14) intron (NM_177028, intron 10 of 14) 42008 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-6 chr4 105897766 105898166 + 0.464317215211849 NA Intergenic Intergenic -343247 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-11 chr8 109142359 109142610 + 0.464317215211849 NA intron (NR_126329, intron 2 of 9) intron (NR_126329, intron 2 of 9) 67262 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-4 chr16 23239909 23240245 + 0.464317215211849 NA intron (NM_001252505, intron 1 of 7) intron (NM_001252505, intron 1 of 7) 14056 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-3 chr13 34369639 34369961 + 0.464317215211849 NA Intergenic Intergenic -24618 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-20 chr9 114978542 114978957 + 0.464317215211849 NA Intergenic CpG -44762 NM_175380 333433 Mm.38198 NM_175380 ENSMUSG00000050627 Gpd1l 2210409H23Rik|D9Ertd660e glycerol-3-phosphate dehydrogenase 1-like protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-14 chr4 130519876 130520313 + 0.464317215211849 NA Intergenic Intergenic 53942 NM_025998 67149 Mm.423029 NM_025998 ENSMUSG00000078532 Nkain1 2610200G18Rik|2810426C15Rik Na+/K+ transporting ATPase interacting 1 protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-5 chr2 167552673 167553164 + 0.464317215211849 NA Intergenic Intergenic 14723 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-5 chr2 167552791 167553132 + 0.464317215211849 NA Intergenic Intergenic 14766 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-3 chr11 103142583 103143012 + 0.464317215211849 NA Intergenic Intergenic 9438 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849 chr1 43819546 43820107 + 0.464317215211849 NA intron (NM_026430, intron 1 of 14) intron (NM_026430, intron 1 of 14) 7882 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-10 chr7 89769695 89770347 + 0.464317215211849 NA intron (NM_181407, intron 3 of 13) intron (NM_181407, intron 3 of 13) 133608 NM_001162979 70884 Mm.252823 NM_001162979 ENSMUSG00000039391 Ccdc81 4921513D09Rik coiled-coil domain containing 81 protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-4 chr18 56736802 56737330 + 0.464317215211849 NA intron (NM_010721, intron 5 of 10) RSINE1|SINE|B4 29253 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-7 chr8 71671920 71672233 + 0.464317215211849 NA promoter-TSS (NM_001029873) promoter-TSS (NM_001029873) -319 NM_001029873 382018 Mm.334606 NM_001029873 ENSMUSG00000034799 Unc13a 2410078G03Rik|Munc13-1 unc-13 homolog A (C. elegans) protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-7 chr4 155249471 155249792 + 0.464317215211849 NA promoter-TSS (NM_001190445) promoter-TSS (NM_001190445) -335 NM_001190445 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-7 chr2 148874987 148875332 + 0.464317215211849 NA exon (NM_009976, exon 1 of 3) exon (NM_009976, exon 1 of 3) 353 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-4 chr13 115101028 115101641 + 0.464317215211849 NA intron (NM_001033228, intron 1 of 28) intron (NM_001033228, intron 1 of 28) 630 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-7 chr14 76481074 76481362 + 0.464317215211849 NA intron (NM_207652, intron 1 of 2) intron (NM_207652, intron 1 of 2) -7218 NM_001177751 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-2 chr10 14545258 14545664 + 0.464317215211849 NA promoter-TSS (NM_001002268) promoter-TSS (NM_001002268) -425 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-6 chr2 110187996 110188249 + 0.464317215211849 NA Intergenic Intergenic 117603 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak2_25_27_-0.381816747602491_4.61644654825636_0.464317215211849-8 chr5 34956701 34957369 + 0.464317215211849 NA intron (NM_173402, intron 1 of 16) intron (NM_173402, intron 1 of 16) 7587 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-6 chr6 91204133 91204546 + 0.464317215211849 NA Intergenic Intergenic -8425 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849-5 chr13 55600288 55600736 + 0.464317215211849 NA intron (NM_146045, intron 1 of 5) URR1A|DNA|hAT-Charlie 616 NM_001311137 218271 Mm.139825 NM_146045 ENSMUSG00000021504 B4galt7 - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein-coding common_peak2_32_21_0.307634365760461_4.61324880151753_0.464317215211849-3 chr19 8714075 8714454 + 0.464317215211849 NA promoter-TSS (NM_008577) promoter-TSS (NM_008577) -367 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding unique_peak2_24_27_-0.438001080332052_4.58835438189158_0.464317215211849 chr12 13145894 13146488 + 0.464317215211849 NA Intergenic Intergenic 102983 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-5 chr17 46674624 46674985 + 0.464317215211849 NA promoter-TSS (NM_144857) promoter-TSS (NM_144857) -549 NM_144857 224823 Mm.45101 NM_144857 ENSMUSG00000023971 Rrp36 - ribosomal RNA processing 36 homolog (S. cerevisiae) protein-coding common_peak1_32_21_0.307634365760461_4.61324880151753_0.464317215211849-9 chr5 136464233 136464819 + 0.464317215211849 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -88723 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA common_peak1_129_119_-0.175805481546015_6.81898785483551_0.464222568780026-2 chr3 152209248 152210283 + 0.464222568780026 NA promoter-TSS (NM_001355372) promoter-TSS (NM_001355372) 318 NM_001356363 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_129_119_-0.175805481546015_6.81898785483551_0.464222568780026 chr15 41788312 41789736 + 0.464222568780026 NA promoter-TSS (NM_130885) promoter-TSS (NM_130885) -10 NM_001130165 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_109_102_-0.194723205405524_6.58913892448046_0.463996621321638 chr10 23569675 23571005 + 0.463996621321638 NA Intergenic Intergenic 215111 NR_037680 100529074 Mm.371846 NR_037680 ENSMUSG00000070063 Snora33 ACA33|MBI-42 small nucleolar RNA, H/ACA box 33 snoRNA common_peak2_199_179_-0.143664193323855_7.42002099966775_0.463632304793368 chr10 93160798 93162710 + 0.463632304793368 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 878 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak1_151_138_-0.163887577324849_7.03699728406108_0.463553417341568 chr5 121544713 121546269 + 0.463553417341568 NA 5' UTR (NM_010765, exon 1 of 14) 5' UTR (NM_010765, exon 1 of 14) 401 NM_010765 17165 Mm.272206 NM_010765 ENSMUSG00000029454 Mapkapk5 MK5|PRAK MAP kinase-activated protein kinase 5 protein-coding common_peak1_174_158_-0.155980023131161_7.23489294371877_0.463416613078058 chr8 94666747 94667640 + 0.463416613078058 NA 5' UTR (NM_024269, exon 1 of 6) 5' UTR (NM_024269, exon 1 of 6) 102 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak2_75_72_-0.227716083908115_6.07596651692596_0.463230925696336 chr16 3744137 3744957 + 0.463230925696336 NA exon (NM_148924, exon 1 of 6) exon (NM_148924, exon 1 of 6) 448 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak2_75_72_-0.227716083908115_6.07596651692596_0.463230925696336-2 chr2 85050448 85050917 + 0.463230925696336 NA intron (NM_001081260, intron 1 of 11) intron (NM_001081260, intron 1 of 11) 222 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak1_74_72_-0.246690094500255_6.06647951162989_0.463230925696336-2 chr8 108764941 108765673 + 0.463230925696336 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 50663 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_74_72_-0.246690094500255_6.06647951162989_0.463230925696336 chr7 44928638 44929480 + 0.463230925696336 NA intron (NM_001077264, intron 1 of 22) intron (NM_001077264, intron 1 of 22) 431 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak2_74_72_-0.246690094500255_6.06647951162989_0.463230925696336 chr5 38259940 38260861 + 0.463230925696336 NA 5' UTR (NM_001356960, exon 1 of 5) 5' UTR (NM_001356960, exon 1 of 5) 215 NM_025480 66309 Mm.256185 NM_025480 ENSMUSG00000067365 Tmem128 2810021O14Rik transmembrane protein 128 protein-coding common_peak1_87_62_0.194840499523899_6.07470017326187_0.463230925696324 chr17 84789787 84790862 + 0.463230925696324 NA intron (NM_028233, intron 1 of 37) CpG 462 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_87_62_0.194840499523899_6.07470017326187_0.463230925696324-2 chr2 18996977 18998092 + 0.463230925696324 NA promoter-TSS (NR_024323) promoter-TSS (NR_024323) 587 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak2_87_62_0.194840499523899_6.07470017326187_0.463230925696324 chr12 5175573 5176802 + 0.463230925696324 NA intron (NM_001164493, intron 3 of 13) intron (NM_001164493, intron 3 of 13) 199495 NM_001164493 208439 Mm.388281 NM_001164493 ENSMUSG00000020627 Klhl29 A230106N14Rik|Gm68|Kbtbd9|mKIAA1921 kelch-like 29 protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739-7 chr5 115564886 115565796 + 0.462861812831739 NA promoter-TSS (NM_172719) promoter-TSS (NM_172719) 78 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739-5 chr18 38631689 38632709 + 0.462861812831739 NA Intergenic Intergenic -30931 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty RTK signaling antagonist 4 protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739-6 chr4 59335601 59336535 + 0.462861812831739 NA intron (NM_001163288, intron 12 of 16) intron (NM_001163288, intron 12 of 16) 76017 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_46_47_-0.311301197419102_5.42931190201161_0.462861812831739-4 chr2 72314493 72315325 + 0.462861812831739 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 29208 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_56_39_0.228070961885239_5.43596357582998_0.462861812831739-2 chr17 46711497 46712061 + 0.462861812831739 NA exon (NM_145488, exon 1 of 17) exon (NM_145488, exon 1 of 17) 316 NM_145488 224824 Mm.299399 NM_145488 ENSMUSG00000002763 Pex6 AI132582|D130055I09Rik|mKIAA4177 peroxisomal biogenesis factor 6 protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739-4 chr18 4375538 4376067 + 0.462861812831739 NA intron (NM_026157, intron 1 of 8) CpG 210 NM_001361009 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak1_46_47_-0.311301197419102_5.42931190201161_0.462861812831739 chr17 34118556 34119167 + 0.462861812831739 NA non-coding (NR_037970, exon 1 of 13) non-coding (NR_037970, exon 1 of 13) 1039 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak2_46_47_-0.311301197419102_5.42931190201161_0.462861812831739-3 chr17 88595362 88596300 + 0.462861812831739 NA Intergenic Intergenic -30724 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739-2 chr11 120573512 120574105 + 0.462861812831739 NA promoter-TSS (NM_011032) promoter-TSS (NM_011032) -555 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak2_46_47_-0.311301197419102_5.42931190201161_0.462861812831739-2 chr12 86834218 86834612 + 0.462861812831739 NA Intergenic Intergenic 50399 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739 chr10 86300742 86301238 + 0.462861812831739 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 578 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_56_39_0.228070961885239_5.43596357582998_0.462861812831739-3 chr13 59674977 59675729 + 0.462861812831739 NA intron (NM_027307, intron 1 of 10) intron (NM_027307, intron 1 of 10) 431 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak2_46_47_-0.311301197419102_5.42931190201161_0.462861812831739 chr10 7025384 7025977 + 0.462861812831739 NA intron (NM_001039652, intron 5 of 5) intron (NM_001039652, intron 5 of 5) -2495 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_46_47_-0.311301197419102_5.42931190201161_0.462861812831739-5 chr7 84150606 84151427 + 0.462861812831739 NA intron (NM_133722, intron 1 of 2) intron (NM_133722, intron 1 of 2) 877 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak2_56_39_0.228070961885239_5.43596357582998_0.462861812831739 chr1 180386935 180387426 + 0.462861812831739 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -56631 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_146_107_0.152251263856797_6.83101313409187_0.462783166581151 chr2 30472195 30473394 + 0.462783166581151 NA exon (NM_030244, exon 1 of 1) exon (NM_030244, exon 1 of 1) 1405 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_130_120_-0.176800928832204_6.83046277285849_0.462783166581151 chr3 89164280 89165567 + 0.462783166581151 NA 5' UTR (NM_007712, exon 1 of 13) 5' UTR (NM_007712, exon 1 of 13) 128 NM_001163432 12748 Mm.288098 NM_007712 ENSMUSG00000068917 Clk2 AU041688 CDC-like kinase 2 protein-coding common_peak1_146_107_0.152251263856797_6.83101313409187_0.462783166581151 chr6 145864873 145866812 + 0.462783166581151 NA promoter-TSS (NM_024469) promoter-TSS (NM_024469) -422 NM_001271768 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_71_50_0.212230927127965_5.77854080553548_0.462580151197435-4 chr15 56692731 56693731 + 0.462580151197435 NA intron (NR_002874, intron 1 of 3) intron (NR_002874, intron 1 of 3) 1315 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak2_71_50_0.212230927127965_5.77854080553548_0.462580151197435-2 chr15 3905991 3906695 + 0.462580151197435 NA Intergenic Intergenic 73230 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding unique_peak1_71_50_0.212230927127965_5.77854080553548_0.462580151197435 chr8 60953867 60954776 + 0.462580151197435 NA intron (NM_007711, intron 1 of 11) intron (NM_007711, intron 1 of 11) 478 NM_173876 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding common_peak1_71_50_0.212230927127965_5.77854080553548_0.462580151197435-5 chr19 8722683 8723199 + 0.462580151197435 NA promoter-TSS (NR_002896) promoter-TSS (NR_002896) 428 NM_001161413 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_71_50_0.212230927127965_5.77854080553548_0.462580151197435-3 chr12 111302817 111303684 + 0.462580151197435 NA intron (NM_183016, intron 27 of 36) intron (NM_183016, intron 27 of 36) 32154 NM_033603 93835 Mm.197639 NM_033603 ENSMUSG00000021278 Amn - amnionless protein-coding common_peak1_71_50_0.212230927127965_5.77854080553548_0.462580151197435 chr1 192070012 192070859 + 0.462580151197435 NA exon (NM_011633, exon 2 of 10) exon (NM_011633, exon 2 of 10) 22164 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_71_50_0.212230927127965_5.77854080553548_0.462580151197435 chr14 36918454 36919442 + 0.462580151197435 NA intron (NM_028407, intron 2 of 7) intron (NM_028407, intron 2 of 7) 587 NM_001347503 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_71_50_0.212230927127965_5.77854080553548_0.462580151197435-2 chr12 80270733 80271812 + 0.462580151197435 NA Intergenic Intergenic -10891 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-3 chr16 16358133 16359142 + 0.462580151197411 NA promoter-TSS (NM_001276341) promoter-TSS (NM_001276341) -62 NR_075074 74006 Mm.218820 NM_152816 ENSMUSG00000022789 Dnm1l 6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python dynamin 1-like protein-coding common_peak2_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-5 chr8 31525340 31525936 + 0.462580151197411 NA Intergenic Intergenic 157889 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-2 chr15 5220944 5221595 + 0.462580151197411 NA Intergenic Intergenic 22918 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_60_59_-0.259734526305643_5.7770233324557_0.462580151197411 chr12 80216006 80217253 + 0.462580151197411 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 43742 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-3 chr8 111027164 111027681 + 0.462580151197411 NA intron (NM_001190786, intron 1 of 11) intron (NM_001190786, intron 1 of 11) 348 NM_172284 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding common_peak1_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-4 chr9 56041875 56042644 + 0.462580151197411 NA intron (NM_001278274, intron 1 of 1) CpG 414 NM_011992 26611 Mm.1782 NM_011992 ENSMUSG00000032320 Rcn2 AA408742|Tcbp49 reticulocalbin 2 protein-coding common_peak2_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-2 chr13 32556768 32557791 + 0.462580151197411 NA Intergenic Intergenic -218735 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_60_59_-0.259734526305643_5.7770233324557_0.462580151197411 chr13 69534926 69535440 + 0.462580151197411 NA Intergenic CpG-3990 -1319 NM_001169131 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak2_60_59_-0.259734526305643_5.7770233324557_0.462580151197411-4 chr4 120951438 120952523 + 0.462580151197411 NA promoter-TSS (NM_001005788) promoter-TSS (NM_001005788) -279 NM_001005788 381549 Mm.331840 NM_001005788 ENSMUSG00000064141 Zfp69 Gm1029|Krab2|Zfp63 zinc finger protein 69 protein-coding common_peak2_343_259_0.102709778461245_8.07372270225908_0.462514964746341 chr8 92847813 92849369 + 0.462514964746341 NA intron (NM_008610, intron 11 of 12) intron (NM_008610, intron 11 of 12) -6742 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak2_278_209_0.110820246768324_7.76965564105029_0.462442164105415 chr11 74723179 74724925 + 0.462442164105415 NA promoter-TSS (NR_037610) promoter-TSS (NR_037610) -194 NR_037610 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding common_peak2_248_186_0.115209783657492_7.60449935171638_0.462406714167163 chr3 144570417 144571783 + 0.462406714167163 NA promoter-TSS (NM_011828) promoter-TSS (NM_011828) 673 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_248_186_0.115209783657492_7.60449935171638_0.462406714167163 chr16 65816184 65818908 + 0.462406714167163 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 1913 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak1_105_76_0.171928535001715_6.35275080819576_0.462347762207705 chr15 76948469 76949129 + 0.462347762207705 NA exon (NM_001347540, exon 2 of 5) exon (NM_001347540, exon 2 of 5) 538 NM_001347540 117171 Mm.322968 NM_054099 ENSMUSG00000063236 1110038F14Rik - RIKEN cDNA 1110038F14 gene protein-coding common_peak2_92_87_-0.208146476857061_6.35535838020877_0.462347762207705-2 chr4 147904356 147905016 + 0.462347762207705 NA promoter-TSS (NM_001285923) promoter-TSS (NM_001285923) 12 NM_001285923 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak2_92_87_-0.208146476857061_6.35535838020877_0.462347762207705 chr10 127667889 127668894 + 0.462347762207705 NA intron (NR_045171, intron 1 of 1) intron (NR_045171, intron 1 of 1) 1268 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA common_peak2_105_76_0.171928535001715_6.35275080819576_0.462347762207705 chr4 11155750 11156283 + 0.462347762207705 NA promoter-TSS (NM_021897) promoter-TSS (NM_021897) -425 NM_001199105 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap|p53DINP1 transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak1_92_87_-0.208146476857061_6.35535838020877_0.462347762207705 chr12 80221100 80222099 + 0.462347762207705 NA intron (NM_134156, intron 1 of 20) MIRb|SINE|MIR 38772 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_176_159_-0.148746386910473_7.24755490143213_0.462343874319641 chr7 67952086 67954010 + 0.462343874319641 NA intron (NM_010513, intron 1 of 20) CpG-13221 791 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_169_125_0.138097873443925_7.04632886022188_0.462321018645952 chr10 22730630 22732097 + 0.462321018645952 NA promoter-TSS (NM_011603) promoter-TSS (NM_011603) 84 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak2_169_125_0.138097873443925_7.04632886022188_0.462321018645952-2 chr15 8443073 8444493 + 0.462321018645952 NA intron (NM_201232, intron 1 of 45) CpG 680 NM_027707 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak1_125_91_0.162753362616578_6.6049386373653_0.46231439386471 chr8 11007252 11008858 + 0.46231439386471 NA exon (NM_001081212, exon 1 of 2) exon (NM_001081212, exon 1 of 2) 205 NR_046017 619321 Mm.403007 NR_046017 ENSMUSG00000096938 9530052E02Rik - RIKEN cDNA 9530052E02 gene ncRNA common_peak2_125_91_0.162753362616578_6.6049386373653_0.46231439386471 chr11 97766001 97767054 + 0.46231439386471 NA promoter-TSS (NM_026186) promoter-TSS (NM_026186) 86 NM_026186 67480 Mm.33206 NM_026186 ENSMUSG00000018541 Cwc25 1300013D05Rik|AA473636|Ccdc49|R75228 CWC25 spliceosome-associated protein protein-coding common_peak2_125_91_0.162753362616578_6.6049386373653_0.46231439386471-2 chr15 35937387 35938238 + 0.46231439386471 NA intron (NM_053071, intron 1 of 3) CpG 434 NM_053071 12864 Mm.548 NM_053071 ENSMUSG00000014313 Cox6c - cytochrome c oxidase subunit VIc protein-coding common_peak2_201_181_-0.145351720514528_7.43511877994143_0.461751159717704 chr5 137101815 137103059 + 0.461751159717704 NA Intergenic Intergenic 13770 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_221_165_0.122646952791484_7.43636290774267_0.461751159717704 chr13 17803133 17805196 + 0.461751159717704 NA exon (NM_001081058, exon 1 of 14) exon (NM_001081058, exon 1 of 14) 933 NM_001081058 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding common_peak1_131_121_-0.177781312311617_6.84184668140708_0.461368947762428 chr16 13256018 13257252 + 0.461368947762428 NA intron (NM_001122667, intron 1 of 16) CpG 154 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_131_121_-0.177781312311617_6.84184668140708_0.461368947762428-2 chr7 24884237 24885628 + 0.461368947762428 NA promoter-TSS (NM_001360115) promoter-TSS (NM_001360115) 19 NM_001360115 20085 Mm.300281 NM_023133 ENSMUSG00000040952 Rps19 Dsk3 ribosomal protein S19 protein-coding common_peak1_147_108_0.148666457134028_6.84251755334394_0.461368947762403 chr4 43383252 43384594 + 0.461368947762403 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) 1941 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak2_147_108_0.148666457134028_6.84251755334394_0.461368947762403 chr5 21054951 21055917 + 0.461368947762403 NA intron (NM_011203, intron 1 of 17) CpG 477 NM_001356591 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_153_140_-0.165771879800849_7.05666541249837_0.461107178185414 chr19 46503501 46505174 + 0.461107178185414 NA intron (NM_053100, intron 1 of 5) intron (NM_053100, intron 1 of 5) 2689 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_88_63_0.188307226399927_6.09415361319996_0.460841271984764 chr13 94788945 94789860 + 0.460841271984764 NA intron (NM_009321, intron 1 of 3) intron (NM_009321, intron 1 of 3) 459 NM_009321 21371 Mm.379025 NM_009321 ENSMUSG00000042043 Tbca Tbca13 tubulin cofactor A protein-coding common_peak1_88_63_0.188307226399927_6.09415361319996_0.460841271984764-3 chr7 13009450 13010219 + 0.460841271984764 NA promoter-TSS (NM_001024699) promoter-TSS (NM_001024699) 18 NM_001024699 232879 Mm.279272 NM_001024699 ENSMUSG00000049600 Zbtb45 BB161562|Gm157|Zfp499 zinc finger and BTB domain containing 45 protein-coding common_peak2_76_73_-0.228618913457761_6.09514390890007_0.460841271984764-2 chr5 137105657 137106984 + 0.460841271984764 NA Intergenic Intergenic 9887 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_76_73_-0.228618913457761_6.09514390890007_0.460841271984764-2 chr9 108460505 108461051 + 0.460841271984764 NA intron (NM_133744, intron 1 of 1) CpG 260 NM_133744 72454 Mm.46488 NM_133744 ENSMUSG00000049305 Ccdc71 2600016J21Rik coiled-coil domain containing 71 protein-coding common_peak1_88_63_0.188307226399927_6.09415361319996_0.460841271984764-2 chr18 60756547 60757212 + 0.460841271984764 NA Intergenic Intergenic -8214 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_76_73_-0.228618913457761_6.09514390890007_0.460841271984764 chr5 130222037 130222843 + 0.460841271984764 NA 5' UTR (NM_027854, exon 1 of 7) 5' UTR (NM_027854, exon 1 of 7) 105 NM_027854 71667 Mm.258508 NM_027854 ENSMUSG00000053094 Tmem248 0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik transmembrane protein 248 protein-coding common_peak2_76_73_-0.228618913457761_6.09514390890007_0.460841271984764 chr4 155942991 155943596 + 0.460841271984764 NA promoter-TSS (NM_001039157) promoter-TSS (NM_001039157) -520 NM_001039158 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak1_222_166_0.120420380510165_7.44391448272913_0.460826821252015 chr9 67044714 67047815 + 0.460826821252015 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) -2393 NM_001164256 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_457_348_0.0880201222292971_8.4910932873243_0.460822053365918 chr19 41262094 41265402 + 0.460822053365918 NA intron (NM_133352, intron 1 of 14) CpG 256 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_111_104_-0.196656383020686_6.61591732615578_0.460666562799274 chr8 105605296 105606179 + 0.460666562799274 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 508 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak2_112_104_-0.183922816005871_6.62228410966319_0.460666562799274 chr4 120825048 120826101 + 0.460666562799274 NA promoter-TSS (NM_001357194) promoter-TSS (NM_001357194) 167 NM_001277095 18046 Mm.318389 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak2_112_104_-0.183922816005871_6.62228410966319_0.460666562799274-2 chr9 100545117 100546078 + 0.460666562799274 NA intron (NM_010878, intron 1 of 3) CpG 537 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak2_93_88_-0.209127107237587_6.3711698773476_0.460389472422342-2 chr2 38643206 38643924 + 0.460389472422342 NA intron (NM_011187, intron 1 of 7) intron (NM_011187, intron 1 of 7) 341 NM_011187 19177 Mm.389251 NM_011187 ENSMUSG00000026750 Psmb7 AU020723|MC14 proteasome (prosome, macropain) subunit, beta type 7 protein-coding common_peak1_93_88_-0.209127107237587_6.3711698773476_0.460389472422342-4 chr5 31568075 31569238 + 0.460389472422342 NA TTS (NR_102275) TTS (NR_102275) 2741 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_93_88_-0.209127107237587_6.3711698773476_0.460389472422342 chr1 58586334 58587363 + 0.460389472422342 NA promoter-TSS (NM_172513) promoter-TSS (NM_172513) 451 NM_025597 66495 Mm.2033 NM_025597 ENSMUSG00000026032 Ndufb3 2700033I16Rik|CI-B12 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 protein-coding common_peak2_107_77_0.180089652464666_6.37544704509458_0.460389472422342-2 chr16 4789277 4790544 + 0.460389472422342 NA promoter-TSS (NM_001358080) promoter-TSS (NM_001358080) 31 NM_025670 66626 Mm.157648 NM_025670 ENSMUSG00000004071 Cdip1 2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP cell death inducing Trp53 target 1 protein-coding common_peak2_93_88_-0.209127107237587_6.3711698773476_0.460389472422342 chr11 35877847 35879187 + 0.460389472422342 NA intron (NM_170779, intron 9 of 22) intron (NM_170779, intron 9 of 22) -43989 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak2_106_77_0.16676381816691_6.3687841279457_0.460389472422342 chr4 149306601 149307611 + 0.460389472422342 NA intron (NM_008441, intron 1 of 20) CpG 592 NM_207682 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak1_107_77_0.180089652464666_6.37544704509458_0.460389472422342-2 chr8 124662143 124663265 + 0.460389472422342 NA intron (NM_175149, intron 1 of 3) intron (NM_175149, intron 1 of 3) 665 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak1_107_77_0.180089652464666_6.37544704509458_0.460389472422342 chr1 40275730 40276588 + 0.460389472422342 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 9573 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_93_88_-0.209127107237587_6.3711698773476_0.460389472422342-3 chr19 6950573 6951480 + 0.460389472422342 NA intron (NM_001285453, intron 3 of 3) intron (NM_001285453, intron 3 of 3) 8464 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak2_107_77_0.180089652464666_6.37544704509458_0.460389472422342 chr13 63564359 63565796 + 0.460389472422342 NA intron (NM_001328514, intron 1 of 23) CpG-3956 658 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak1_93_88_-0.209127107237587_6.3711698773476_0.460389472422342-2 chr17 79894881 79896019 + 0.460389472422342 NA intron (NM_001357752, intron 1 of 13) CpG 673 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak2_93_88_-0.209127107237587_6.3711698773476_0.460389472422342-3 chr4 126320596 126321756 + 0.460389472422342 NA TTS (NM_011902) TTS (NM_011902) 527 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding common_peak1_178_161_-0.150572430548117_7.26456378761057_0.460240378665717 chr4 58911119 58912943 + 0.460240378665717 NA promoter-TSS (NM_001355697) promoter-TSS (NM_001355697) -101 NM_001355696 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|Ecpas|mKIAA0368 expressed sequence AI314180 protein-coding common_peak2_196_146_0.126866017238311_7.26310535345552_0.460240378665668 chr19 59942534 59943892 + 0.460240378665668 NA 5' UTR (NM_001033172, exon 1 of 6) 5' UTR (NM_001033172, exon 1 of 6) 151 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-3 chr17 66749606 66750086 + 0.460129356264044 NA intron (NM_001357625, intron 20 of 32) MER2|DNA|TcMar-Tigger 35390 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA common_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044-3 chr2 4651641 4652126 + 0.460129356264044 NA intron (NM_026045, intron 1 of 9) intron (NM_026045, intron 1 of 9) 252 NM_026045 67229 Mm.38529 NM_026045 ENSMUSG00000039449 Prpf18 2810441A10Rik pre-mRNA processing factor 18 protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-8 chr4 35225370 35225700 + 0.460129356264044 NA intron (NM_001081343, intron 1 of 10) CpG 345 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585|C9orf72 RIKEN cDNA 3110043O21 gene protein-coding common_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044-2 chr17 26243709 26244190 + 0.460129356264044 NA intron (NM_001206335, intron 1 of 12) CpG 293 NM_207217 106581 Mm.28844 NM_207217 ENSMUSG00000024187 Fam234a Itfg3 family with sequence similarity 234, member A protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-2 chr16 29579370 29579868 + 0.460129356264044 NA intron (NM_133752, intron 1 of 28) intron (NM_133752, intron 1 of 28) 285 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-5 chr19 10107729 10108244 + 0.460129356264044 NA Intergenic Intergenic -6483 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-10 chr8 126875493 126875944 + 0.460129356264044 NA Intergenic Intergenic 26698 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044-5 chr5 125069842 125070626 + 0.460129356264044 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 66759 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044 chr15 53617879 53618218 + 0.460129356264044 NA intron (NM_177225, intron 4 of 4) intron (NM_177225, intron 4 of 4) -3769 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044 chr1 167308764 167309056 + 0.460129356264044 NA exon (NM_001039483, exon 1 of 7) exon (NM_001039483, exon 1 of 7) 240 NM_001039483 68944 Mm.330045 NM_026881 ENSMUSG00000052428 Tmco1 1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39 transmembrane and coiled-coil domains 1 protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-4 chr18 56359137 56359582 + 0.460129356264044 NA Intergenic Intergenic -40981 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-9 chr6 87810994 87811623 + 0.460129356264044 NA intron (NR_104478, intron 1 of 2) CpG 471 NM_001039394 69834 Mm.37380 NM_133717 ENSMUSG00000030055 Rab43 1810048P08Rik|2500004H21Rik|AW490415 RAB43, member RAS oncogene family protein-coding unique_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044-2 chr7 144022948 144023540 + 0.460129356264044 NA Intergenic Intergenic 13990 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044-4 chr3 108210223 108210476 + 0.460129356264044 NA exon (NM_001289545, exon 1 of 11) exon (NM_001289545, exon 1 of 11) 178 NM_001289545 72522 Mm.187326 NM_175183 ENSMUSG00000048997 Atxn7l2 2610528J18Rik ataxin 7-like 2 protein-coding unique_peak1_44_30_0.257171837039709_5.08278222890673_0.460129356264044 chr3 119955414 119955908 + 0.460129356264044 NA Intergenic Intergenic -172273 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-6 chr3 41741945 41742260 + 0.460129356264044 NA promoter-TSS (NM_001291048) promoter-TSS (NM_001291048) 412 NR_155540 67161 Mm.331001 NM_001081411 ENSMUSG00000059834 Sclt1 2610207F23Rik|4931421F20Rik|CAGGS-SB10|Tg(ACTB-sb10)1Dla|Tg(CAG-sb10)1Dla sodium channel and clathrin linker 1 protein-coding common_peak2_44_30_0.257171837039709_5.08278222890673_0.460129356264044-7 chr3 107822012 107822471 + 0.460129356264044 NA Intergenic Intergenic -54989 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-3 chr17 70719375 70720013 + 0.460129356264038 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 127083 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-8 chr8 119811191 119811886 + 0.460129356264038 NA intron (NM_028071, intron 3 of 3) ID2|SINE|ID 29041 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-4 chr2 30350363 30350936 + 0.460129356264038 NA exon (NM_001289710, exon 4 of 10) exon (NM_001289710, exon 4 of 10) 8667 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding common_peak1_35_37_-0.356216264770881_5.06981938105814_0.460129356264038 chr14 32165450 32165970 + 0.460129356264038 NA promoter-TSS (NM_019744) promoter-TSS (NM_019744) -79 NM_019744 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-5 chr2 140170274 140170842 + 0.460129356264038 NA promoter-TSS (NM_001081090) promoter-TSS (NM_001081090) 0 NM_001081090 66580 Mm.21228 NM_001081090 ENSMUSG00000045624 Esf1 2610101J03Rik|ABTAP|AW545818|C79684 ESF1 nucleolar pre-rRNA processing protein homolog protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-6 chr4 115784765 115785509 + 0.460129356264038 NA exon (NM_181040, exon 1 of 9) exon (NM_181040, exon 1 of 9) 323 NM_181040 230649 Mm.109600 NM_181040 ENSMUSG00000028710 Atpaf1 6330547J17Rik|AI593252|ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-7 chr6 113692194 113692597 + 0.460129356264038 NA intron (NM_001113553, intron 11 of 11) intron (NM_001113553, intron 11 of 11) -4655 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038 chr1 74015196 74015968 + 0.460129356264038 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 108865 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-9 chr9 107905735 107906297 + 0.460129356264038 NA promoter-TSS (NM_009074) promoter-TSS (NM_009074) -873 NR_109782 19882 Mm.3901 NM_009074 ENSMUSG00000032584 Mst1r CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK macrophage stimulating 1 receptor (c-met-related tyrosine kinase) protein-coding common_peak1_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-2 chr3 122088008 122088375 + 0.460129356264038 NA intron (NM_007378, intron 11 of 49) MIRb|SINE|MIR 43731 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-10 chr9 108002650 108003014 + 0.460129356264038 NA intron (NM_013785, intron 1 of 5) CpG 184 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak2_35_37_-0.356216264770881_5.06981938105814_0.460129356264038-2 chr14 30878422 30879145 + 0.460129356264038 NA promoter-TSS (NM_181390) promoter-TSS (NM_181390) -474 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak1_133_122_-0.168016467272096_6.85850627170319_0.459979256805583-2 chr12 108793097 108794795 + 0.459979256805583 NA exon (NM_009537, exon 1 of 5) exon (NM_009537, exon 1 of 5) 635 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_133_122_-0.168016467272096_6.85850627170319_0.459979256805583 chr10 24478174 24479281 + 0.459979256805583 NA Intergenic PB1D7|SINE|Alu -116715 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_133_122_-0.168016467272096_6.85850627170319_0.459979256805583 chr13 95523526 95525189 + 0.459979256805583 NA intron (NM_007974, intron 1 of 1) CpG 883 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_148_109_0.145137683000606_6.85392855502496_0.459979256805583 chr12 10390766 10391741 + 0.459979256805583 NA intron (NM_023697, intron 1 of 1) intron (NM_023697, intron 1 of 1) 473 NM_023697 105014 Mm.119343 NM_023697 ENSMUSG00000020621 Rdh14 3110030G19Rik|AW215439|PAN2 retinol dehydrogenase 14 (all-trans and 9-cis) protein-coding common_peak1_148_109_0.145137683000606_6.85392855502496_0.459979256805583-2 chr2 32680374 32681287 + 0.459979256805583 NA intron (NM_001146348, intron 13 of 14) intron (NM_001146348, intron 13 of 14) 6936 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak1_149_109_0.154719771281859_6.85871959916559_0.459979256805583 chr7 122969981 122970764 + 0.459979256805583 NA promoter-TSS (NM_011247) promoter-TSS (NM_011247) 87 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak2_149_109_0.154719771281859_6.85871959916559_0.459979256805583 chr6 86404257 86405396 + 0.459979256805583 NA intron (NM_001164078, intron 1 of 11) intron (NM_001164078, intron 1 of 11) 607 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-18 chr2 29633964 29634204 + 0.459837087125828 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 14364 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-6 chr10 4159874 4160124 + 0.459837087125828 NA intron (NM_001170785, intron 27 of 27) intron (NM_001170785, intron 27 of 27) 53121 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-46 chr9 57626408 57626663 + 0.459837087125828 NA TTS (NM_007783) TTS (NM_007783) -5761 NM_199222 235416 Mm.295630 NM_199222 ENSMUSG00000056271 Lman1l BC020188|slamp lectin, mannose-binding 1 like protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-6 chr15 69078614 69078886 + 0.459837087125828 NA intron (NM_010158, intron 7 of 8) intron (NM_010158, intron 7 of 8) 150330 NM_010158 13992 Mm.17964 NM_010158 ENSMUSG00000022332 Khdrbs3 Etle|SLM-2|Salp|Slm2|T-STAR KH domain containing, RNA binding, signal transduction associated 3 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-13 chr3 89411556 89411800 + 0.459837087125828 NA 5' UTR (NM_001362376, exon 1 of 8) 5' UTR (NM_001362376, exon 1 of 8) 203 NM_001362375 319945 Mm.258142 NM_177041 ENSMUSG00000042642 Flad1 A930017E24Rik|Pp591 flavin adenine dinucleotide synthetase 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-7 chr11 97629329 97629657 + 0.459837087125828 NA 5' UTR (NM_175332, exon 1 of 1) 5' UTR (NM_175332, exon 1 of 1) 223 NM_175332 103551 Mm.24506 NM_175332 ENSMUSG00000043439 Epop AA409164|AI413509|AW539173|E13|E130012A19Rik|esPRC2p48 elongin BC and polycomb repressive complex 2 associated protein protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-12 chr18 74981784 74981983 + 0.459837087125828 NA promoter-TSS (NR_110446) promoter-TSS (NR_110446) -336 NR_110446 71545 Mm.488094 NR_110446 9030625G05Rik - RIKEN cDNA 9030625G05 gene ncRNA common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-2 chr11 6474715 6474945 + 0.459837087125828 NA 3' UTR (NM_011221, exon 1 of 1) 3' UTR (NM_011221, exon 1 of 1) 1246 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-21 chr19 9066491 9066713 + 0.459837087125828 NA intron (NM_001286518, intron 6 of 6) (TG)n|Simple_repeat|Simple_repeat 21354 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828 chr1 39760454 39760683 + 0.459837087125828 NA Intergenic Intergenic -39579 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-33 chr5 74531427 74531650 + 0.459837087125828 NA exon (NM_178672, exon 1 of 5) exon (NM_178672, exon 1 of 5) 204 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-16 chr14 70170254 70170508 + 0.459837087125828 NA intron (NM_145978, intron 6 of 9) intron (NM_145978, intron 6 of 9) 6434 NM_001253736 213019 Mm.283968 NM_145978 ENSMUSG00000022090 Pdlim2 4732462F18Rik|Slim PDZ and LIM domain 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-52 chrX 94153113 94153361 + 0.459837087125828 NA Intergenic Intergenic -29470 NM_001358356 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-3 chr18 46198287 46198573 + 0.459837087125828 NA intron (NM_178872, intron 1 of 9) CpG 388 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding common_peak1_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-2 chr4 107524234 107524437 + 0.459837087125828 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 89616 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-10 chr18 32139507 32139797 + 0.459837087125828 NA promoter-TSS (NM_001042767) promoter-TSS (NM_001042767) -82 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-17 chr8 71950583 71950894 + 0.459837087125828 NA promoter-TSS (NM_001164581) promoter-TSS (NM_001164581) -328 NM_001164581 234413 Mm.334607 NM_001164581 ENSMUSG00000052446 Zfp961 A230105L22Rik|BC065788|mszf37|mszf55-2 zinc finger protein 961 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-28 chr6 99443715 99444002 + 0.459837087125828 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -8513 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828 chr13 30668544 30668761 + 0.459837087125828 NA intron (NM_134068, intron 1 of 7) intron (NM_134068, intron 1 of 7) 8593 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-30 chr8 25077591 25077823 + 0.459837087125828 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 24104 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-36 chr6 145999034 145999251 + 0.459837087125828 NA Intergenic Intergenic 65020 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-29 chr3 122074143 122074340 + 0.459837087125828 NA intron (NM_007378, intron 6 of 49) intron (NM_007378, intron 6 of 49) 29781 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-47 chr9 63965609 63965873 + 0.459837087125828 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 56318 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-4 chr18 80464024 80464231 + 0.459837087125828 NA intron (NM_026295, intron 1 of 12) intron (NM_026295, intron 1 of 12) 5540 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-19 chr2 110295514 110295846 + 0.459837087125828 NA intron (NM_130452, intron 2 of 6) intron (NM_130452, intron 2 of 6) 10045 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-27 chr6 58641842 58642122 + 0.459837087125828 NA intron (NM_011920, intron 1 of 15) intron (NM_011920, intron 1 of 15) 45310 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-8 chr17 3337312 3337517 + 0.459837087125828 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) 10841 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-9 chr10 75773060 75773271 + 0.459837087125828 NA TTS (NM_133994) TTS (NM_133994) 209 NM_010027 13202 Mm.298947 NM_010027 ENSMUSG00000001666 Ddt C78655 D-dopachrome tautomerase protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-14 chr12 24975009 24975359 + 0.459837087125828 NA intron (NM_001081378, intron 1 of 31) CpG 252 NM_001081378 77480 Mm.250641 NM_001081378 ENSMUSG00000036333 Kidins220 3110039L19Rik|AI194387|AI316525|C330002I19Rik|mKIAA1250 kinase D-interacting substrate 220 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-11 chr18 11916152 11916347 + 0.459837087125828 NA intron (NM_001146287, intron 4 of 9) intron (NM_001146287, intron 4 of 9) -75811 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-5 chr15 59652026 59652227 + 0.459837087125828 NA intron (NM_144549, intron 2 of 2) intron (NM_144549, intron 2 of 2) 3472 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-15 chr5 64390135 64390487 + 0.459837087125828 NA Intergenic Intergenic 77631 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA unique_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-3 chr2 151984528 151984858 + 0.459837087125828 NA Intergenic Intergenic -4474 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-2 chr10 68267958 68268148 + 0.459837087125828 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 10673 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-19 chr9 33851144 33851350 + 0.459837087125828 NA Intergenic Intergenic -191124 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik TH-cre|Tg(Th-cre)1Tmd RIKEN cDNA 7630403G23 gene ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-23 chr2 11705400 11705633 + 0.459837087125828 NA promoter-TSS (NM_001271501) promoter-TSS (NM_001271501) -196 NM_008358 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-10 chr12 85471648 85471878 + 0.459837087125828 NA Intergenic Intergenic -2127 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-5 chr3 90513833 90514098 + 0.459837087125828 NA promoter-TSS (NM_009113) promoter-TSS (NM_009113) 365 NM_011309 20193 Mm.24662 NM_011309 ENSMUSG00000044080 S100a1 AI266795|S100|S100a S100 calcium binding protein A1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828 chr1 64690264 64690545 + 0.459837087125828 NA promoter-TSS (NM_001097644) promoter-TSS (NM_001097644) 255 NR_038009 69941 Mm.69044 NR_038009 ENSMUSG00000087213 2810408I11Rik - RIKEN cDNA 2810408I11 gene ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-39 chr7 18957865 18958130 + 0.459837087125828 NA exon (NM_001029877, exon 4 of 4) exon (NM_001029877, exon 4 of 4) -29527 NM_194064 378430 Mm.277153 NM_194064 ENSMUSG00000051965 Nanos2 nos2 nanos C2HC-type zinc finger 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-50 chr9 119181621 119181956 + 0.459837087125828 NA intron (NM_001037749, intron 2 of 11) intron (NM_001037749, intron 2 of 11) 8605 NM_001037749 382113 Mm.335525 NM_001037749 ENSMUSG00000070280 Slc22a14 Gm1128 solute carrier family 22 (organic cation transporter), member 14 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-4 chr14 55681354 55681685 + 0.459837087125828 NA exon (NM_145705, exon 1 of 9) exon (NM_145705, exon 1 of 9) 298 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-44 chr8 18630869 18631083 + 0.459837087125828 NA intron (NM_173189, intron 7 of 13) intron (NM_173189, intron 7 of 13) 35845 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT|Tg(HLA-A2.1)1Enge microcephaly, primary autosomal recessive 1 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-12 chr3 68677010 68677218 + 0.459837087125828 NA Intergenic Intergenic -13530 NM_001159424 16159 Mm.103783 NM_008351 ENSMUSG00000027776 Il12a IL-12p35|Il-12a|Ll12a|p35 interleukin 12a protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-35 chr5 115573511 115573804 + 0.459837087125828 NA intron (NM_172719, intron 2 of 57) intron (NM_172719, intron 2 of 57) -7292 NR_105996 102466790 NR_105996 ENSMUSG00000099047 Mir7029 Gm27293|mmu-mir-7029 microRNA 7029 ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-24 chr2 29643868 29644133 + 0.459837087125828 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 24280 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-3 chr10 69711188 69711414 + 0.459837087125828 NA intron (NM_170730, intron 1 of 17) MIR|SINE|MIR 177593 NM_146005 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-11 chr11 96758637 96758907 + 0.459837087125828 NA 3' UTR (NM_001177899, exon 12 of 12) 3' UTR (NM_001177899, exon 12 of 12) 18783 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-8 chr10 44126426 44126648 + 0.459837087125828 NA Intergenic Intergenic -43910 NR_001582 70365 Mm.87073 NR_001582 ENSMUSG00000091358 Speer5-ps1 1700007C10Rik|SPEER-5|Speer5-ps spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1 pseudo common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-16 chr5 64817088 64817290 + 0.459837087125828 NA intron (NM_008453, intron 2 of 5) intron (NM_008453, intron 2 of 5) 13666 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-3 chr13 97243507 97243785 + 0.459837087125828 NA intron (NM_007930, intron 1 of 2) intron (NM_007930, intron 1 of 2) 2541 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-49 chr9 77544550 77544821 + 0.459837087125828 NA promoter-TSS (NM_172528) promoter-TSS (NM_172528) 167 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-40 chr7 28379444 28379787 + 0.459837087125828 NA promoter-TSS (NM_011756) promoter-TSS (NM_011756) -387 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-12 chr11 100960104 100960335 + 0.459837087125828 NA intron (NM_008986, intron 1 of 1) intron (NM_008986, intron 1 of 1) 10396 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-11 chr15 27415991 27416261 + 0.459837087125828 NA Intergenic Intergenic -50551 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-13 chr2 128430731 128430972 + 0.459837087125828 NA Intergenic Intergenic -1500 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-27 chr2 158222410 158222675 + 0.459837087125828 NA intron (NM_001131021, intron 1 of 15) intron (NM_001131021, intron 1 of 15) 6682 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-3 chr1 155742905 155743155 + 0.459837087125828 NA Intergenic CpG-621 -1003 NM_010712 16872 Mm.103624 NM_010712 ENSMUSG00000026468 Lhx4 A330062J17Rik|Gsh-4|Gsh4 LIM homeobox protein 4 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-33 chr9 57988414 57988911 + 0.459837087125828 NA Intergenic Intergenic -9362 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-13 chr15 81860473 81860872 + 0.459837087125828 NA Intergenic Intergenic -2346 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-29 chr7 72590624 72590839 + 0.459837087125828 NA Intergenic Intergenic -284136 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-3 chr11 103049824 103050056 + 0.459837087125828 NA intron (NM_008707, intron 3 of 11) B1_Mus2|SINE|Alu 21397 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-9 chr17 21733419 21733664 + 0.459837087125828 NA promoter-TSS (NM_001164676) promoter-TSS (NM_001164676) -183 NM_001164676 381067 Mm.482723 NM_001164676 ENSMUSG00000061544 Zfp229 - zinc finger protein 229 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-19 chr16 5256311 5256562 + 0.459837087125828 NA promoter-TSS (NM_027446) promoter-TSS (NM_027446) -480 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-34 chr5 114131178 114131551 + 0.459837087125828 NA exon (NM_011677, exon 1 of 6) exon (NM_011677, exon 1 of 6) 208 NM_011677 22256 Mm.1393 NM_011677 ENSMUSG00000029591 Ung UNG1|UNG2 uracil DNA glycosylase protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-31 chr8 35632183 35632509 + 0.459837087125828 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -43326 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-7 chr6 73222090 73222352 + 0.459837087125828 NA promoter-TSS (NM_001164669) promoter-TSS (NM_001164669) -590 NM_001164669 330355 Mm.333166 NM_001164669 ENSMUSG00000052861 Dnah6 9830168K20|A730004I20Rik|Dnahc6|mKIAA1697|mdhc6 dynein, axonemal, heavy chain 6 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-37 chr6 146491265 146491568 + 0.459837087125828 NA intron (NM_019923, intron 1 of 56) intron (NM_019923, intron 1 of 56) 10807 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-10 chr11 32218358 32218662 + 0.459837087125828 NA intron (NM_010117, intron 1 of 17) intron (NM_010117, intron 1 of 17) 3783 NM_010117 13650 Mm.11545 NM_010117 ENSMUSG00000020282 Rhbdf1 C16ORF8|Dist|Dist1|Egfr-rs|mKIAA4242 rhomboid 5 homolog 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-24 chr5 4024147 4024424 + 0.459837087125828 NA intron (NM_194462, intron 21 of 47) intron (NM_194462, intron 21 of 47) 80412 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-26 chr2 152608002 152608210 + 0.459837087125828 NA intron (NM_001037247, intron 1 of 1) intron (NM_001037247, intron 1 of 1) 3779 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-41 chr7 45333565 45333842 + 0.459837087125828 NA promoter-TSS (NM_175130) promoter-TSS (NM_175130) 77 NM_175130 68667 Mm.439890 NM_175130 ENSMUSG00000038260 Trpm4 1110030C19Rik|AW047689|LTRPC4|LTrpC-4|TRPM4B transient receptor potential cation channel, subfamily M, member 4 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-13 chr12 12421094 12421316 + 0.459837087125828 NA Intergenic Intergenic -28730 NR_045829 70858 Mm.410838 NR_045829 ENSMUSG00000114136 4921511I17Rik - RIKEN cDNA 4921511I17 gene ncRNA unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-12 chr15 64007030 64007331 + 0.459837087125828 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) -9114 NM_001360035 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-14 chr15 83403018 83403262 + 0.459837087125828 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 29710 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-6 chr11 77837107 77837312 + 0.459837087125828 NA intron (NM_011586, intron 20 of 39) intron (NM_011586, intron 20 of 39) 35911 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-6 chr15 75268197 75268423 + 0.459837087125828 NA promoter-TSS (NM_008530) promoter-TSS (NM_008530) -111 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-2 chr2 117747501 117747845 + 0.459837087125828 NA Intergenic Intergenic 65129 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-9 chr18 11052671 11052870 + 0.459837087125828 NA promoter-TSS (NR_105023) promoter-TSS (NR_105023) -203 NR_105022 68434 Mm.57626 NR_105022 ENSMUSG00000097222 1010001N08Rik Gata6as RIKEN cDNA 1010001N08 gene ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-42 chr7 49882222 49882513 + 0.459837087125828 NA Intergenic Intergenic -27932 NM_001146013 104245 Mm.207053 NM_148931 ENSMUSG00000039728 Slc6a5 Glyt2|prestin solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-14 chr4 149886622 149886822 + 0.459837087125828 NA Intergenic Intergenic 68284 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-7 chr16 37675704 37675957 + 0.459837087125828 NA Intergenic Intergenic -21462 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding common_peak1_10_13_-0.614069560314055_3.50032014190058_0.459837087125828 chr16 85803272 85803460 + 0.459837087125828 NA promoter-TSS (NM_009621) promoter-TSS (NM_009621) -253 NM_009621 11504 Mm.1421 NM_009621 ENSMUSG00000022893 Adamts1 ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-5 chr1 189776880 189777211 + 0.459837087125828 NA intron (NM_008976, intron 1 of 18) intron (NM_008976, intron 1 of 18) 48777 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-31 chr4 89124974 89125266 + 0.459837087125828 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 3106 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-11 chr18 39737440 39737644 + 0.459837087125828 NA Intergenic Intergenic -35955 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-20 chr16 32658364 32658602 + 0.459837087125828 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 9714 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-8 chr12 8351498 8351749 + 0.459837087125828 NA Intergenic Intergenic 38190 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-18 chr9 25246333 25246565 + 0.459837087125828 NA Intergenic Intergenic -5542 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-22 chr4 48227492 48227709 + 0.459837087125828 NA intron (NM_001355184, intron 3 of 10) intron (NM_001355184, intron 3 of 10) -14385 NR_035484 100316708 NR_035484 ENSMUSG00000087844 Mir1958 mmu-mir-1958 microRNA 1958 ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-32 chr4 152294100 152294390 + 0.459837087125828 NA Intergenic Intergenic -2583 NM_008237 15207 Mm.3516 NM_008237 ENSMUSG00000028946 Hes3 Hes-3|bHLHb43 hes family bHLH transcription factor 3 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-2 chr1 62712096 62712398 + 0.459837087125828 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 8930 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-17 chr15 27753228 27753452 + 0.459837087125828 NA intron (NM_001081302, intron 45 of 56) intron (NM_001081302, intron 45 of 56) -71798 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-25 chr2 91303308 91303606 + 0.459837087125828 NA intron (NM_175123, intron 4 of 8) intron (NM_175123, intron 4 of 8) 38342 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-2 chr1 152791435 152791722 + 0.459837087125828 NA Intergenic Intergenic -8575 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-15 chr17 75467023 75467306 + 0.459837087125828 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 1626 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-43 chr7 84576694 84576948 + 0.459837087125828 NA intron (NR_045098, intron 2 of 2) intron (NR_045098, intron 2 of 2) 29121 NM_010176 14085 Mm.3798 NM_010176 ENSMUSG00000030630 Fah swst fumarylacetoacetate hydrolase protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-48 chr9 70141135 70141379 + 0.459837087125828 NA intron (NM_029784, intron 1 of 8) CpG 300 NM_029784 76886 Mm.44355 NM_029784 ENSMUSG00000032224 Fam81a 6430514L14Rik family with sequence similarity 81, member A protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-28 chr3 95233123 95233312 + 0.459837087125828 NA intron (NM_001038708, intron 3 of 4) intron (NM_001038708, intron 3 of 4) 4274 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-15 chr12 86852285 86852544 + 0.459837087125828 NA Intergenic Intergenic 32400 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-30 chr4 11966774 11967060 + 0.459837087125828 NA promoter-TSS (NM_001290391) promoter-TSS (NM_001290391) 343 NR_040577 100503636 Mm.209078 NR_040577 1700123M08Rik 1600025K15Rik RIKEN cDNA 1700123M08 gene ncRNA unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-34 chr9 120837055 120837367 + 0.459837087125828 NA Intergenic Intergenic 78039 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA unique_peak1_10_13_-0.614069560314055_3.50032014190058_0.459837087125828 chr10 121206258 121206509 + 0.459837087125828 NA Intergenic Intergenic -3734 NR_152796 74647 Mm.370609 NR_152796 ENSMUSG00000112846 4930432O09Rik - RIKEN cDNA 4930432O09 gene ncRNA unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-26 chr5 53043254 53043587 + 0.459837087125828 NA Intergenic Intergenic -5933 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding common_peak1_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-3 chr7 24316907 24317146 + 0.459837087125828 NA promoter-TSS (NM_001199321) promoter-TSS (NM_001199321) -360 NM_001199321 22756 Mm.295762 NM_009568 ENSMUSG00000074282 Zfp94 - zinc finger protein 94 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-4 chr1 180812202 180812655 + 0.459837087125828 NA intron (NM_008210, intron 1 of 3) intron (NM_008210, intron 1 of 3) 1177 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-14 chr2 128545167 128545361 + 0.459837087125828 NA Intergenic Intergenic -47077 NM_001310641 241634 Mm.297682 NM_001310641 ENSMUSG00000074812 Spdye4c Gm355|SpeedyB3|SpyB3 speedy/RINGO cell cycle regulator family, member E4C protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-4 chr13 104109904 104110130 + 0.459837087125828 NA promoter-TSS (NM_029447) promoter-TSS (NM_029447) 276 NM_144838 218544 Mm.44416 NM_144838 ENSMUSG00000042743 Sgtb C630001O05Rik small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-10 chr17 56475804 56476046 + 0.459837087125828 NA intron (NM_001252455, intron 1 of 27) CpG 555 NM_001252455 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-21 chr3 121945653 121945893 + 0.459837087125828 NA Intergenic Intergenic -7456 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-7 chr15 77803699 77803938 + 0.459837087125828 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 38357 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-23 chr4 135819255 135819629 + 0.459837087125828 NA Intergenic Intergenic -36629 NM_001284196 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-18 chr15 64040564 64040804 + 0.459837087125828 NA intron (NM_001360037, intron 1 of 11) intron (NM_001360037, intron 1 of 11) 19080 NM_001360038 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-32 chr8 70655525 70655786 + 0.459837087125828 NA intron (NM_023217, intron 2 of 4) intron (NM_023217, intron 2 of 4) 4083 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-16 chr19 57237096 57237344 + 0.459837087125828 NA Intergenic Intergenic -21188 NM_178688 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-8 chr16 97235557 97235763 + 0.459837087125828 NA Intergenic Intergenic -64925 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-22 chr2 6331894 6332132 + 0.459837087125828 NA intron (NM_001080548, intron 1 of 14) intron (NM_001080548, intron 1 of 14) 9256 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-25 chr5 13416241 13416514 + 0.459837087125828 NA intron (NM_001243073, intron 2 of 17) intron (NM_001243073, intron 2 of 17) 17068 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-17 chr2 10047902 10048121 + 0.459837087125828 NA intron (NM_027748, intron 1 of 6) CpG 598 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding unique_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828 chr19 46988368 46988572 + 0.459837087125828 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) -18903 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-8 chr9 78023121 78023370 + 0.459837087125828 NA Intergenic Intergenic -28713 NM_008103 14531 Mm.1400 NM_008103 ENSMUSG00000023333 Gcm1 GCMa|Gcm-rs2|Gcm1-rs1|glide glial cells missing homolog 1 protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-6 chr4 40703908 40704110 + 0.459837087125828 NA promoter-TSS (NM_001025445) promoter-TSS (NM_001025445) -815 NM_001025445 66408 Mm.430710 NM_025545 ENSMUSG00000028411 Aptx 2410016G21Rik|AA388047|FHA-HIT aprataxin protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-20 chr3 89090207 89090449 + 0.459837087125828 NA promoter-TSS (NM_001083808) promoter-TSS (NM_001083808) -297 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-5 chr14 105589633 105589877 + 0.459837087125828 NA intron (NR_102319, intron 1 of 2) intron (NR_102319, intron 1 of 2) 206 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-51 chrX 19160202 19160475 + 0.459837087125828 NA Intergenic Intergenic -13367 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-38 chr6 146882185 146882429 + 0.459837087125828 NA Intergenic Intergenic -6187 NM_001355728 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-45 chr8 111774162 111774453 + 0.459837087125828 NA intron (NM_011801, intron 6 of 6) intron (NM_011801, intron 6 of 6) -30458 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-5 chr10 108436285 108436540 + 0.459837087125828 NA Intergenic Intergenic 104223 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-4 chr10 86170195 86170424 + 0.459837087125828 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 74455 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828 chr1 135410755 135411004 + 0.459837087125828 NA intron (NM_001357578, intron 5 of 24) PB1|SINE|Alu 19612 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding common_peak2_15_9_0.408111949330434_3.52598406955258_0.459837087125828-2 chr17 70730947 70731211 + 0.459837087125828 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 115698 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828 chr1 91095545 91095790 + 0.459837087125828 NA intron (NM_008515, intron 10 of 22) intron (NM_008515, intron 10 of 22) 42223 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_10_13_-0.614069560314055_3.50032014190058_0.459837087125828-9 chr12 80370081 80370321 + 0.459837087125828 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 21476 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_15_9_0.408111949330434_3.52598406955258_0.459837087125828-7 chr10 17367134 17367330 + 0.459837087125828 NA Intergenic Intergenic -271450 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_61_60_-0.260287798010105_5.80059343855783_0.459662873060288-3 chr12 100326145 100326814 + 0.459662873060288 NA intron (NM_001033213, intron 18 of 19) intron (NM_001033213, intron 18 of 19) 49870 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA common_peak1_61_60_-0.260287798010105_5.80059343855783_0.459662873060288-5 chr18 69345835 69346705 + 0.459662873060288 NA 5' UTR (NM_001361126, exon 1 of 20) 5' UTR (NM_001361126, exon 1 of 20) 110 NM_001361126 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak1_61_60_-0.260287798010105_5.80059343855783_0.459662873060288 chr12 35246780 35247471 + 0.459662873060288 NA Intergenic Intergenic -52228 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_61_60_-0.260287798010105_5.80059343855783_0.459662873060288-3 chr6 39573991 39575150 + 0.459662873060288 NA exon (NM_178873, exon 1 of 8) exon (NM_178873, exon 1 of 8) 694 NM_178873 57869 Mm.247957 NM_178873 ENSMUSG00000046947 Adck2 AA408112|BB006057 aarF domain containing kinase 2 protein-coding common_peak2_61_60_-0.260287798010105_5.80059343855783_0.459662873060288-2 chr5 32853770 32854282 + 0.459662873060288 NA intron (NM_194340, intron 1 of 10) intron (NM_194340, intron 1 of 10) 204 NM_194340 215476 Mm.248721 NM_194340 ENSMUSG00000054280 Prr14l 6030436E02Rik|C330019G07Rik|Prl14l proline rich 14-like protein-coding common_peak1_61_60_-0.260287798010105_5.80059343855783_0.459662873060288-4 chr16 4885764 4886707 + 0.459662873060288 NA 5' UTR (NM_001357061, exon 1 of 16) 5' UTR (NM_001357061, exon 1 of 16) 135 NM_001357061 17237 Mm.291326 NM_029657 ENSMUSG00000022517 Mgrn1 2610042J20Rik|mKIAA0544|md|nc mahogunin, ring finger 1 protein-coding common_peak2_61_60_-0.260287798010105_5.80059343855783_0.459662873060288 chr14 43344371 43345101 + 0.459662873060288 NA intron (NM_027940, intron 3 of 4) intron (NM_027940, intron 3 of 4) 3075 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_61_60_-0.260287798010105_5.80059343855783_0.459662873060288-2 chr12 80260504 80261357 + 0.459662873060288 NA promoter-TSS (NM_001346669) promoter-TSS (NM_001346669) -549 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-7 chr4 147906472 147907315 + 0.459662873060263 NA Intergenic Intergenic -1984 NM_001285921 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-6 chr18 44828161 44829008 + 0.459662873060263 NA promoter-TSS (NM_001163013) promoter-TSS (NM_001163013) -81 NM_001163013 240255 Mm.244482 NM_001163013 ENSMUSG00000034653 Ythdc2 3010002F02Rik|BC037178 YTH domain containing 2 protein-coding common_peak2_72_51_0.203975717424835_5.80242757685351_0.459662873060263 chr19 44145719 44146424 + 0.459662873060263 NA intron (NM_028607, intron 1 of 4) intron (NM_028607, intron 1 of 4) 375 NM_028607 73689 Mm.124685 NM_028607 ENSMUSG00000057506 Bloc1s2 2410089B13Rik|BLOS2|Bloc1s2a biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-5 chr17 73108034 73108963 + 0.459662873060263 NA intron (NM_001081071, intron 1 of 5) intron (NM_001081071, intron 1 of 5) 513 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263 chr11 106084573 106085403 + 0.459662873060263 NA promoter-TSS (NM_011947) promoter-TSS (NM_011947) 86 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-8 chr8 70139450 70140124 + 0.459662873060263 NA promoter-TSS (NM_011266) promoter-TSS (NM_011266) 288 NR_132133 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding common_peak2_72_51_0.203975717424835_5.80242757685351_0.459662873060263-2 chr8 70139429 70140106 + 0.459662873060263 NA promoter-TSS (NM_011266) promoter-TSS (NM_011266) 268 NR_132133 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-3 chr17 26676152 26677227 + 0.459662873060263 NA intron (NM_025272, intron 1 of 3) CpG 293 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-2 chr14 54686211 54686618 + 0.459662873060263 NA 5' UTR (NM_021437, exon 1 of 2) 5' UTR (NM_021437, exon 1 of 2) 243 NM_021437 58248 Mm.197509 NM_021437 ENSMUSG00000040822 1700123O20Rik MNCb-2990 RIKEN cDNA 1700123O20 gene protein-coding common_peak1_72_51_0.203975717424835_5.80242757685351_0.459662873060263-4 chr17 34030823 34031464 + 0.459662873060263 NA promoter-TSS (NM_011306) promoter-TSS (NM_011306) 547 NM_001077709 14977 Mm.18556 NM_008202 ENSMUSG00000024327 Slc39a7 AA408174|AI117660|AL024048|H-2Ke4|H2-Ke4|Ke-4|Ke4|Ring5|Zip7 solute carrier family 39 (zinc transporter), member 7 protein-coding common_peak1_261_231_-0.122973666258426_7.79649416199836_0.459532227116864 chr19 36833615 36835550 + 0.459532227116864 NA exon (NM_001163635, exon 1 of 27) exon (NM_001163635, exon 1 of 27) 350 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-8 chr8 123949463 123949989 + 0.459173512026158 NA promoter-TSS (NM_172288) promoter-TSS (NM_172288) -461 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak2_48_48_-0.281351700749154_5.47403399374063_0.459173512026158 chr10 91171735 91172307 + 0.459173512026158 NA promoter-TSS (NM_011605) promoter-TSS (NM_011605) -402 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak1_57_40_0.217361016759183_5.46623251299768_0.459173512026158 chr11 88522597 88523703 + 0.459173512026158 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -96101 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_58_40_0.241849080704596_5.47847654497038_0.459173512026158-2 chr2 39190097 39190715 + 0.459173512026158 NA intron (NM_178778, intron 1 of 17) CpG 324 NM_178778 320271 Mm.204836 NM_178778 ENSMUSG00000035236 Scai 9330112M16|A930041I02Rik|AI662729 suppressor of cancer cell invasion protein-coding common_peak2_48_48_-0.281351700749154_5.47403399374063_0.459173512026158-2 chr2 71589357 71590157 + 0.459173512026158 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -43003 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak2_58_40_0.241849080704596_5.47847654497038_0.459173512026158-2 chr19 55714284 55715010 + 0.459173512026158 NA Intergenic Intergenic -12443 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_57_40_0.217361016759183_5.46623251299768_0.459173512026158-4 chr9 50885462 50886107 + 0.459173512026158 NA intron (NM_001286553, intron 15 of 16) intron (NM_001286553, intron 15 of 16) 28860 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_58_40_0.241849080704596_5.47847654497038_0.459173512026158 chr13 55099699 55100165 + 0.459173512026158 NA intron (NM_001293660, intron 1 of 12) CpG 368 NR_121592 20184 Mm.259301 NM_011307 ENSMUSG00000025878 Uimc1 9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110 ubiquitin interaction motif containing 1 protein-coding common_peak1_57_40_0.217361016759183_5.46623251299768_0.459173512026158-2 chr17 42909888 42910486 + 0.459173512026158 NA Intergenic Intergenic -33763 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-4 chr3 152478004 152478506 + 0.459173512026158 NA intron (NM_001081277, intron 12 of 13) intron (NM_001081277, intron 12 of 13) 81571 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak2_57_40_0.217361016759183_5.46623251299768_0.459173512026158 chr14 62760446 62761070 + 0.459173512026158 NA 5' UTR (NM_008715, exon 1 of 19) 5' UTR (NM_008715, exon 1 of 19) 257 NR_045503 71000 Mm.399410 NR_045503 ENSMUSG00000097775 4931440J10Rik - RIKEN cDNA 4931440J10 gene ncRNA common_peak2_58_40_0.241849080704596_5.47847654497038_0.459173512026158-4 chr8 117335253 117335749 + 0.459173512026158 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -13669 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_58_40_0.241849080704596_5.47847654497038_0.459173512026158 chr1 132356288 132357063 + 0.459173512026158 NA 3' UTR (NM_001311108, exon 4 of 4) 3' UTR (NM_001311108, exon 4 of 4) 11273 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak1_57_40_0.217361016759183_5.46623251299768_0.459173512026158-3 chr6 87914099 87914804 + 0.459173512026158 NA TTS (NM_017477) TTS (NM_017477) 475 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding common_peak2_57_40_0.217361016759183_5.46623251299768_0.459173512026158-2 chr4 149485381 149485997 + 0.459173512026158 NA promoter-TSS (NM_133435) promoter-TSS (NM_133435) 423 NM_026963 69151 Mm.464434 NM_026963 ENSMUSG00000028990 Lzic 1810030J04Rik|AW047580 leucine zipper and CTNNBIP1 domain containing protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-6 chr5 100846471 100846912 + 0.459173512026158 NA 5' UTR (NM_172715, exon 2 of 13) 5' UTR (NM_172715, exon 2 of 13) 462 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding common_peak2_57_40_0.217361016759183_5.46623251299768_0.459173512026158-5 chr8 85431998 85432592 + 0.459173512026158 NA intron (NM_025722, intron 1 of 3) CpG 546 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-3 chr12 76530333 76530907 + 0.459173512026158 NA Intergenic ID4|SINE|ID 2592 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak1_48_48_-0.281351700749154_5.47403399374063_0.459173512026158-3 chr3 121671731 121672347 + 0.459173512026158 NA intron (NM_001033814, intron 2 of 5) intron (NM_001033814, intron 2 of 5) 1276 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_47_48_-0.310889177243203_5.45926525549361_0.459173512026158 chr17 84081692 84082075 + 0.459173512026158 NA intron (NR_045458, intron 2 of 5) intron (NR_045458, intron 2 of 5) 3223 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_58_40_0.241849080704596_5.47847654497038_0.459173512026158-3 chr8 46499394 46500193 + 0.459173512026158 NA intron (NM_001302163, intron 2 of 20) intron (NM_001302163, intron 2 of 20) 8827 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-5 chr5 43233317 43233804 + 0.459173512026158 NA promoter-TSS (NM_175937) promoter-TSS (NM_175937) 97 NM_001177379 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding common_peak1_48_48_-0.281351700749154_5.47403399374063_0.459173512026158-2 chr1 165236336 165237022 + 0.459173512026158 NA exon (NM_001357410, exon 1 of 7) exon (NM_001357410, exon 1 of 7) 279 NM_145513 226591 Mm.21520 NM_145513 ENSMUSG00000040843 Tiprl 1810011K17Rik TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein-coding common_peak2_57_40_0.217361016759183_5.46623251299768_0.459173512026158-4 chr5 149052525 149053001 + 0.459173512026158 NA intron (NM_010439, intron 1 of 4) intron (NM_010439, intron 1 of 4) 294 NM_010439 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak1_57_40_0.217361016759183_5.46623251299768_0.459173512026158 chr15 38594400 38594897 + 0.459173512026158 NA intron (NR_045757, intron 1 of 2) (TTTG)n|Simple_repeat|Simple_repeat 286 NR_045757 69679 Mm.416890 NR_045757 ENSMUSG00000102106 2310043O21Rik - RIKEN cDNA 2310043O21 gene ncRNA common_peak2_48_48_-0.281351700749154_5.47403399374063_0.459173512026158-4 chr8 64614941 64615518 + 0.459173512026158 NA intron (NM_013494, intron 3 of 8) intron (NM_013494, intron 3 of 8) 77880 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_57_40_0.217361016759183_5.46623251299768_0.459173512026158-3 chr5 104408161 104408795 + 0.459173512026158 NA Intergenic GA-rich|Low_complexity|Low_complexity -26633 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-2 chr10 91124200 91124895 + 0.459173512026158 NA promoter-TSS (NM_133668) promoter-TSS (NM_133668) -584 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158-7 chr7 114117433 114117703 + 0.459173512026158 NA 5' UTR (NM_025846, exon 1 of 6) 5' UTR (NM_025846, exon 1 of 6) 213 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_47_48_-0.310889177243203_5.45926525549361_0.459173512026158 chr10 75212052 75212708 + 0.459173512026158 NA promoter-TSS (NM_001145826) promoter-TSS (NM_001145826) -10 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak1_48_48_-0.281351700749154_5.47403399374063_0.459173512026158 chr1 151500141 151500636 + 0.459173512026158 NA intron (NM_001360844, intron 1 of 8) CpG 603 NM_001360845 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding common_peak2_48_48_-0.281351700749154_5.47403399374063_0.459173512026158-3 chr3 121704387 121705113 + 0.459173512026158 NA Intergenic Intergenic -18787 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_127_93_0.154286253820426_6.63173197858785_0.459052083208626 chr16 57419448 57420733 + 0.459052083208626 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 66813 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_113_105_-0.184976377363842_6.63543226588128_0.459052083208626 chr15 11398849 11400154 + 0.459052083208626 NA exon (NM_033074, exon 1 of 19) exon (NM_033074, exon 1 of 19) 157 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_128_93_0.165434301186005_6.63730600227064_0.459052083208626 chr6 88902355 88903973 + 0.459052083208626 NA intron (NM_011906, intron 1 of 11) ID_B1|SINE|B4 913 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_127_93_0.154286253820426_6.63173197858785_0.459052083208626-2 chr3 121684491 121685716 + 0.459052083208626 NA Intergenic Intergenic 14340 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_128_93_0.165434301186005_6.63730600227064_0.459052083208626-2 chr8 122154924 122156092 + 0.459052083208626 NA Intergenic Intergenic -126633 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_156_142_-0.158454025753983_7.0806443239014_0.458733519333425 chr17 69228631 69230267 + 0.458733519333425 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 47757 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA common_peak1_150_110_0.151182037906933_6.87000688530357_0.458613460759951 chr19 40255445 40256704 + 0.458613460759951 NA intron (NM_016861, intron 1 of 6) ID_B1|SINE|B4 15542 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_134_123_-0.169047540306081_6.86967254023383_0.458613460759951-2 chr4 150236417 150238157 + 0.458613460759951 NA promoter-TSS (NM_001025388).2 promoter-TSS (NM_001025388).2 -37 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak2_134_123_-0.169047540306081_6.86967254023383_0.458613460759951 chr4 44012056 44013574 + 0.458613460759951 NA exon (NM_001290470, exon 1 of 6) exon (NM_001290470, exon 1 of 6) 165 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak2_89_64_0.181945354824885_6.1133404904409_0.458521068983781-3 chr5 139797246 139797840 + 0.458521068983781 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 6007 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_89_64_0.181945354824885_6.1133404904409_0.458521068983781 chr12 116281274 116282226 + 0.458521068983781 NA intron (NM_028731, intron 1 of 21) CpG 528 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak1_89_64_0.181945354824885_6.1133404904409_0.458521068983781-3 chr16 85149042 85149783 + 0.458521068983781 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 24295 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak2_89_64_0.181945354824885_6.1133404904409_0.458521068983781-2 chr16 50528663 50529664 + 0.458521068983781 NA intron (NR_040379, intron 1 of 5) CpG 661 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA common_peak1_89_64_0.181945354824885_6.1133404904409_0.458521068983781-2 chr16 24428424 24429450 + 0.458521068983781 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -19154 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_89_64_0.181945354824885_6.1133404904409_0.458521068983781 chr11 16843770 16844902 + 0.458521068983781 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 92133 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_94_89_-0.210087722603894_6.38680923502773_0.458478191157105 chr16 45944513 45945425 + 0.458478191157105 NA promoter-TSS (NR_152227) promoter-TSS (NR_152227) -637 NR_152226 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak1_108_78_0.174914136951343_6.39123781665277_0.458478191157105 chr11 50377763 50378414 + 0.458478191157105 NA intron (NM_001347487, intron 1 of 12) CpG 369 NM_001347487 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak2_108_78_0.174914136951343_6.39123781665277_0.458478191157105 chr15 76948429 76949169 + 0.458478191157105 NA exon (NM_001347540, exon 2 of 5) exon (NM_001347540, exon 2 of 5) 538 NM_001347540 117171 Mm.322968 NM_054099 ENSMUSG00000063236 1110038F14Rik - RIKEN cDNA 1110038F14 gene protein-coding common_peak2_94_89_-0.210087722603894_6.38680923502773_0.458478191157105 chr14 34548551 34549501 + 0.458478191157105 NA intron (NM_001039071, intron 8 of 12) CpG -26225 NM_030062 78243 Mm.117483 NM_030062 ENSMUSG00000021797 9230112D13Rik - RIKEN cDNA 9230112D13 gene protein-coding common_peak2_108_78_0.174914136951343_6.39123781665277_0.458478191157105-2 chr3 57509948 57511017 + 0.458478191157105 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 65394 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_94_89_-0.210087722603894_6.38680923502773_0.458478191157105-2 chr8 80879272 80880427 + 0.458478191157105 NA 5' UTR (NM_001301298, exon 1 of 11) 5' UTR (NM_001301298, exon 1 of 11) 630 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak2_108_78_0.174914136951343_6.39123781665277_0.458478191157105-3 chr8 81013877 81014820 + 0.458478191157105 NA exon (NM_027554, exon 1 of 10) exon (NM_027554, exon 1 of 10) 558 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak2_593_454_0.0778495150468785_8.8686474926095_0.458214684322183 chr19 5843077 5846444 + 0.458214684322183 NA non-coding (NR_003513, exon 1 of 1) non-coding (NR_003513, exon 1 of 1) 718 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_199_148_0.129020382543659_7.28367871173399_0.458191056114509 chr8 105170745 105172247 + 0.458191056114509 NA intron (NM_001161456, intron 2 of 4) CpG-14413 822 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak1_199_148_0.129020382543659_7.28367871173399_0.458191056114509 chr1 131096479 131097827 + 0.458191056114509 NA intron (NM_008551, intron 1 of 9) CpG 690 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779-2 chr19 52631932 52632407 + 0.457753417732779 NA Intergenic Intergenic -291012 NR_030678 100043450 Mm.145594 NR_030678 AA387883 - expressed sequence AA387883 ncRNA unique_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779 chr10 11149527 11150030 + 0.457753417732779 NA intron (NM_001077707, intron 1 of 29) CpG 348 NM_001284354 268281 Mm.133101 NM_172937 ENSMUSG00000090112 Shprh 2610103K11Rik|AA450458|AU024614|BC006883|D230017O13Rik|E130018M05 SNF2 histone linker PHD RING helicase protein-coding common_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779-2 chr11 69662772 69663350 + 0.457753417732779 NA promoter-TSS (NM_001301710) promoter-TSS (NM_001301710) 18 NR_035455 100316840 NR_035455 ENSMUSG00000088752 Mir1934 mir-1934|mmu-mir-1934 microRNA 1934 ncRNA unique_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779 chr8 90741087 90741520 + 0.457753417732779 NA Intergenic Intergenic -87532 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-7 chr2 152606992 152607245 + 0.457753417732779 NA intron (NM_001037247, intron 1 of 1) intron (NM_001037247, intron 1 of 1) 2791 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-10 chr8 110811757 110812196 + 0.457753417732779 NA intron (NM_133953, intron 24 of 25) intron (NM_133953, intron 24 of 25) -6052 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-4 chr14 42794996 42795486 + 0.457753417732779 NA intron (NM_001244671, intron 3 of 4).2 intron (NM_001244671, intron 3 of 4).2 2694 NM_001244671 100042055 Mm.429109 NM_001244671 ENSMUSG00000095226 Gm10377 - predicted gene 10377 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779 chr10 16961935 16962399 + 0.457753417732779 NA intron (NR_038020, intron 5 of 8) intron (NR_038020, intron 5 of 8) 133615 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-5 chr19 23135819 23136298 + 0.457753417732779 NA Intergenic CpG -5168 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-5 chr17 56074731 56074979 + 0.457753417732779 NA exon (NM_024432, exon 2 of 12) exon (NM_024432, exon 2 of 12) 4478 NM_024432 66530 Mm.28000 NM_024432 ENSMUSG00000019578 Ubxn6 1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2 UBX domain protein 6 protein-coding common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-2 chr14 22965251 22965734 + 0.457753417732779 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 129079 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA common_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779 chr1 69610778 69611340 + 0.457753417732779 NA intron (NM_011770, intron 3 of 7) intron (NM_011770, intron 3 of 7) 74901 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-6 chr9 116153884 116154272 + 0.457753417732779 NA intron (NM_029575, intron 1 of 6) intron (NM_029575, intron 1 of 6) 21285 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-6 chr19 6084591 6084803 + 0.457753417732779 NA promoter-TSS (NM_026410) promoter-TSS (NM_026410) 278 NM_001356994 81909 Mm.289471 NM_024231 ENSMUSG00000024792 Zfpl1 - zinc finger like protein 1 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-11 chr9 13245505 13245825 + 0.457753417732779 NA promoter-TSS (NM_001033181) promoter-TSS (NM_001033181) 76 NM_001033181 77532 Mm.459434 NM_001033181 ENSMUSG00000079083 Jrkl C030035D04Rik|HHMJG Jrk-like protein-coding unique_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779 chr11 108920444 108920836 + 0.457753417732779 NA intron (NM_015732, intron 1 of 10) CpG 291 NM_015732 12006 Mm.71710 NM_015732 ENSMUSG00000000142 Axin2 Axi1|Axil|Conductin axin 2 protein-coding unique_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-3 chr10 81059719 81060093 + 0.457753417732779 NA intron (NM_001358550, intron 1 of 11) CpG 270 NM_001358549 52551 Mm.30068 NM_024499 ENSMUSG00000004937 Sgta 5330427H01Rik|AI194281|D10Ertd190e|Sgt|Stg small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha protein-coding common_peak2_33_22_0.286268901279438_4.66669640669673_0.457753417732779-3 chr19 38032598 38032868 + 0.457753417732779 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 10844 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-3 chr13 21362902 21363298 + 0.457753417732779 NA intron (NM_016684, intron 1 of 3) intron (NM_016684, intron 1 of 3) 280 NM_016684 22758 Mm.24124 NM_016684 ENSMUSG00000036721 Zscan12 2510038J07Rik|FPM315|Zfp96|mKIAA0426|zfp-96 zinc finger and SCAN domain containing 12 protein-coding common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-4 chr3 38254421 38254846 + 0.457753417732779 NA Intergenic Intergenic -46514 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-2 chr10 77120046 77120437 + 0.457753417732779 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -6536 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779 chr13 24831827 24832270 + 0.457753417732779 NA promoter-TSS (NM_025790) promoter-TSS (NM_025790) 389 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding common_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779-5 chr5 142921165 142921475 + 0.457753417732779 NA Intergenic Intergenic -14566 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-8 chr5 140015887 140016414 + 0.457753417732779 NA intron (NR_152617, intron 16 of 16) intron (NR_152617, intron 16 of 16) 108207 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-5 chr6 70811743 70812265 + 0.457753417732779 NA Intergenic Intergenic -19829 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_33_22_0.286268901279438_4.66669640669673_0.457753417732779 chr10 86101267 86101677 + 0.457753417732779 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 5618 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779-4 chr2 32288603 32288984 + 0.457753417732779 NA promoter-TSS (NR_110965) promoter-TSS (NR_110965) 540 NM_001080968 99412 Mm.106376 NM_133852 ENSMUSG00000002546 Golga2 AW555139|GM130|mKIAA4150 golgi autoantigen, golgin subfamily a, 2 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-2 chr10 75222956 75223425 + 0.457753417732779 NA intron (NM_001145826, intron 2 of 18) intron (NM_001145826, intron 2 of 18) 10800 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak2_33_22_0.286268901279438_4.66669640669673_0.457753417732779-4 chr5 121593064 121593405 + 0.457753417732779 NA intron (NM_009656, intron 1 of 12) CpG 590 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-7 chrX 157598259 157598640 + 0.457753417732779 NA intron (NM_172307, intron 1 of 10) CpG 266 NM_172307 270669 Mm.37577 NM_172307 ENSMUSG00000046873 Mbtps2 9630032G22Rik|AI662535 membrane-bound transcription factor peptidase, site 2 protein-coding common_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-9 chr6 115676723 115677131 + 0.457753417732779 NA promoter-TSS (NM_001356333) promoter-TSS (NM_001356333) -292 NM_029780 110157 Mm.184163 NM_029780 ENSMUSG00000000441 Raf1 6430402F14Rik|AA990557|BB129353|Craf1|D830050J10Rik|Raf-1|c-Raf|cRaf|v-Raf v-raf-leukemia viral oncogene 1 protein-coding unique_peak2_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-4 chr11 70212439 70212967 + 0.457753417732779 NA Intergenic Intergenic -1207 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_33_22_0.286268901279438_4.66669640669673_0.457753417732779-2 chr18 75695470 75695815 + 0.457753417732779 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 2054 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779-3 chr15 64361956 64362320 + 0.457753417732779 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 20781 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_33_22_0.286268901279438_4.66669640669673_0.457753417732779-5 chr6 108459678 108460076 + 0.457753417732779 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -29866 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_26_28_-0.378379164654169_4.66879141280049_0.457753417732779-3 chr16 32099377 32099674 + 0.457753417732779 NA promoter-TSS (NM_025892) promoter-TSS (NM_025892) 202 NM_001111025 72084 Mm.37613 NM_024464 ENSMUSG00000023791 Pigx 2010319C14Rik|PIG-X phosphatidylinositol glycan anchor biosynthesis, class X protein-coding unique_peak1_33_22_0.286268901279438_4.66669640669673_0.457753417732779-3 chr6 56924089 56924563 + 0.457753417732779 NA promoter-TSS (NM_026004) promoter-TSS (NM_026004) -394 NM_001360963 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|P5'N-1|P5N-1|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_256_192_0.114947956770946_7.64993101565355_0.457574544519053 chr19 5058259 5060103 + 0.457574544519053 NA Intergenic Intergenic 8373 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak1_235_209_-0.128954391489931_7.64976832192116_0.457574544519004 chr7 13036563 13038714 + 0.457574544519004 NA promoter-TSS (NM_001243968) promoter-TSS (NM_001243968) -11 NM_001243968 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak2_114_106_-0.186011765424258_6.64846110368902_0.457469952101277 chr9 56107840 56108918 + 0.457469952101277 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 18403 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_151_111_0.147698573341055_6.88120420872813_0.457270948277713 chr15 76197444 76198670 + 0.457270948277713 NA exon (NM_201393, exon 1 of 32) exon (NM_201393, exon 1 of 32) 152 NM_201393 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_135_124_-0.170063386472123_6.88075259142603_0.457270948277713 chr17 6106937 6108363 + 0.457270948277713 NA intron (NM_001103181, intron 1 of 13) intron (NM_001103181, intron 1 of 13) 820 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_135_124_-0.170063386472123_6.88075259142603_0.457270948277713 chr16 91043371 91044488 + 0.457270948277713 NA intron (NR_152264, intron 1 of 17) CpG 450 NM_026110 67367 Mm.347 NM_026110 ENSMUSG00000022974 Paxbp1 1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp PAX3 and PAX7 binding protein 1 protein-coding common_peak2_200_149_0.126514949798718_7.29207616539524_0.457186059703072 chr19 59344521 59345779 + 0.457186059703072 NA exon (NM_001033222, exon 1 of 5) exon (NM_001033222, exon 1 of 5) 630 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak2_62_61_-0.260826012140041_5.82378330431685_0.456849196733789-2 chr17 24719513 24719938 + 0.456849196733789 NA promoter-TSS (NM_008503) promoter-TSS (NM_008503) 107 NR_028515 100306952 Mm.484806 NR_028515 ENSMUSG00000089255 Snora78 ACA64 small nucleolar RNA, H/ACA box 7 snoRNA common_peak1_62_61_-0.260826012140041_5.82378330431685_0.456849196733789 chr5 135009151 135009840 + 0.456849196733789 NA promoter-TSS (NR_033794) promoter-TSS (NR_033794) 39 NR_033794 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_62_61_-0.260826012140041_5.82378330431685_0.456849196733789 chr11 69979750 69980588 + 0.456849196733789 NA promoter-TSS (NM_026017) promoter-TSS (NM_026017) 161 NM_001253700 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak2_62_61_-0.260826012140041_5.82378330431685_0.456849196733789-3 chr7 25755011 25756016 + 0.456849196733789 NA promoter-TSS (NM_001360789) promoter-TSS (NM_001360789) -754 NM_178089 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak1_73_52_0.195985306920999_5.8259131080237_0.456849196733765-4 chr7 135605718 135606471 + 0.456849196733765 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 266 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_73_52_0.195985306920999_5.8259131080237_0.456849196733765-3 chr4 141538850 141539761 + 0.456849196733765 NA promoter-TSS (NM_019763) promoter-TSS (NM_019763) -708 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak1_73_52_0.195985306920999_5.8259131080237_0.456849196733765 chr15 72809275 72809923 + 0.456849196733765 NA non-coding (NR_002864, exon 1 of 1) non-coding (NR_002864, exon 1 of 1) 725 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak2_73_52_0.195985306920999_5.8259131080237_0.456849196733765 chr8 61270324 61271227 + 0.456849196733765 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) 18097 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_73_52_0.195985306920999_5.8259131080237_0.456849196733765-2 chr15 100599272 100600076 + 0.456849196733765 NA intron (NM_001304965, intron 1 of 10) CpG 310 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-8 chr11 68691473 68691736 + 0.456667090758524 NA promoter-TSS (NM_175260) promoter-TSS (NM_175260) -311 NM_175260 77579 Mm.218233 NM_175260 ENSMUSG00000020900 Myh10 5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005 myosin, heavy polypeptide 10, non-muscle protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-14 chr7 28596674 28597058 + 0.456667090758524 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 1318 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-5 chr18 17290598 17290819 + 0.456667090758524 NA Intergenic Intergenic -55226 NR_033607 664619 Mm.250005 NR_033607 4921533I20Rik - PRP18 pre-mRNA processing factor 18 homolog pseudogene pseudo common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-7 chr15 97904890 97905233 + 0.456667090758524 NA intron (NM_009504, intron 1 of 9) intron (NM_009504, intron 1 of 9) 3235 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-5 chr1 182511988 182512443 + 0.456667090758524 NA exon (NM_009794, exon 2 of 21) exon (NM_009794, exon 2 of 21) 5395 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-10 chr17 26592431 26592820 + 0.456667090758524 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 31113 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-6 chr3 152569199 152569559 + 0.456667090758524 NA intron (NM_001355635, intron 6 of 8) intron (NM_001355635, intron 6 of 8) -97534 NR_040386 99542 Mm.394921 NR_040386 ENSMUSG00000097745 AI115009 - expressed sequence AI115009 ncRNA common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-10 chr6 137125732 137126114 + 0.456667090758524 NA intron (NM_181988, intron 2 of 4) intron (NM_181988, intron 2 of 4) 43795 NM_001164214 232441 Mm.46233 NM_181988 ENSMUSG00000030222 Rerg - RAS-like, estrogen-regulated, growth-inhibitor protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-9 chr6 31061559 31061776 + 0.456667090758524 NA TTS (NR_029744) TTS (NR_029744) 1080 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-6 chr5 151187068 151187373 + 0.456667090758524 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 2973 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-4 chr15 59550735 59551047 + 0.456667090758524 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -97763 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-10 chr17 84118041 84118284 + 0.456667090758524 NA Intergenic Intergenic 39502 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-14 chr9 61402683 61402905 + 0.456667090758524 NA intron (NM_001083928, intron 7 of 19) intron (NM_001083928, intron 7 of 19) 30428 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-6 chr13 32927873 32928114 + 0.456667090758524 NA Intergenic Intergenic -29853 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-7 chr7 74524310 74524644 + 0.456667090758524 NA intron (NM_001038643, intron 1 of 10) intron (NM_001038643, intron 1 of 10) 30303 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-4 chr2 180230797 180231037 + 0.456667090758524 NA Intergenic Intergenic -5058 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-11 chr18 70052912 70053313 + 0.456667090758524 NA intron (NM_001302798, intron 1 of 6) CpG 476 NM_030554 80718 Mm.246753 NM_030554 ENSMUSG00000024511 Rab27b 2310021G14Rik|B130064M09Rik RAB27B, member RAS oncogene family protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-11 chr19 46406232 46406545 + 0.456667090758524 NA intron (NM_001025391, intron 2 of 11) intron (NM_001025391, intron 2 of 11) 9492 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) SUFU negative regulator of hedgehog signaling protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-18 chr5 64505763 64506166 + 0.456667090758524 NA Intergenic Intergenic 28956 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-4 chr11 31542076 31542426 + 0.456667090758524 NA Intergenic Intergenic 129611 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-17 chr7 130670877 130671203 + 0.456667090758524 NA intron (NM_206856, intron 3 of 20) intron (NM_206856, intron 3 of 20) -21516 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-10 chr7 16415678 16416008 + 0.456667090758524 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 14647 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-11 chr17 33783157 33783397 + 0.456667090758524 NA Intergenic Intergenic -1702 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-21 chr6 98959566 98960022 + 0.456667090758524 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 68504 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-15 chr4 80941663 80941909 + 0.456667090758524 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 31100 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-9 chr16 18409807 18410232 + 0.456667090758524 NA intron (NM_001111062, intron 5 of 5) intron (NM_001111062, intron 5 of 5) 3475 NM_001111063 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-4 chr2 122375844 122376103 + 0.456667090758524 NA Intergenic Intergenic -7055 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-15 chrX 73476251 73476575 + 0.456667090758524 NA Intergenic RLTR28|LTR|ERVL -7188 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-7 chr14 7820237 7820528 + 0.456667090758524 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 2425 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-6 chr10 23478552 23478805 + 0.456667090758524 NA Intergenic Intergenic -128735 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524 chr11 16789933 16790250 + 0.456667090758524 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 37888 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-4 chr1 60343800 60344223 + 0.456667090758524 NA intron (NM_030013, intron 1 of 12) PB1D10|SINE|Alu 711 NM_001313721 77951 Mm.197640 NM_030013 ENSMUSG00000049439 Cyp20a1 A930011N14Rik|Cypm cytochrome P450, family 20, subfamily a, polypeptide 1 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524 chr11 99553994 99554503 + 0.456667090758524 NA Intergenic Intergenic 2605 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-3 chr14 27351361 27351626 + 0.456667090758524 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -9896 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-19 chr5 76905241 76905449 + 0.456667090758524 NA intron (NM_173765, intron 1 of 15) CpG 169 NM_173765 231326 Mm.39271 NM_173765 ENSMUSG00000055923 Aasdh A230062G08Rik|A830035E16|Acsf4|U26 aminoadipate-semialdehyde dehydrogenase protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-12 chr2 137715531 137715956 + 0.456667090758524 NA Intergenic Intergenic -540841 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-12 chr18 33460945 33461343 + 0.456667090758524 NA intron (NM_001109988, intron 3 of 4) intron (NM_001109988, intron 3 of 4) 2490 NM_001267717 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-4 chr11 97029855 97030209 + 0.456667090758524 NA promoter-TSS (NM_146027) promoter-TSS (NM_146027) 80 NM_146027 217140 Mm.46189 NM_146027 ENSMUSG00000020877 Scrn2 AV001119|D11Moh48|SES2 secernin 2 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-13 chr2 90580871 90581134 + 0.456667090758524 NA promoter-TSS (NM_008982) promoter-TSS (NM_008982) -355 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-17 chr8 110321905 110322222 + 0.456667090758524 NA intron (NM_172916, intron 6 of 86) intron (NM_172916, intron 6 of 86) 55086 NM_172916 244653 Mm.444803 NM_172916 ENSMUSG00000059854 Hydin 1700034M11Rik|4930545D19Rik|4932703P14|672398|A830061H17|AC069308.21gm4|Gm9558|hy-3|hy3|hyrh HYDIN, axonemal central pair apparatus protein protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-17 chr4 141277136 141277412 + 0.456667090758524 NA Intergenic Intergenic -1165 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-20 chr5 115569585 115569963 + 0.456667090758524 NA intron (NM_172719, intron 1 of 57) intron (NM_172719, intron 1 of 57) 4511 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-6 chr13 64379938 64380329 + 0.456667090758524 NA Intergenic Intergenic -9613 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-2 chr13 17215627 17216179 + 0.456667090758524 NA intron (NM_138654, intron 12 of 13) intron (NM_138654, intron 12 of 13) 478862 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-7 chr5 124579533 124579895 + 0.456667090758524 NA promoter-TSS (NM_145371) promoter-TSS (NM_145371) 566 NM_181410 209357 Mm.185467 NM_181410 ENSMUSG00000029387 Gtf2h3 34kDa|5033417D07Rik|BTF2|BTF2 p34|C730029A10|D5Ertd679e|TFIIH general transcription factor IIH, polypeptide 3 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524 chr1 36557889 36558183 + 0.456667090758524 NA promoter-TSS (NM_001304330) promoter-TSS (NM_001304330) 345 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-14 chr2 117250255 117250591 + 0.456667090758524 NA intron (NM_026620, intron 1 of 7) intron (NM_026620, intron 1 of 7) 684 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-9 chr6 125215732 125216029 + 0.456667090758524 NA intron (NM_001080557, intron 1 of 3) CpG 299 NM_009496 22317 Mm.32321 NM_009496 ENSMUSG00000030337 Vamp1 Syb-1|Syb1|VAMP-1|lew vesicle-associated membrane protein 1 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-13 chr7 100964758 100965048 + 0.456667090758524 NA promoter-TSS (NM_183168) promoter-TSS (NM_183168) -537 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-5 chr3 90513557 90513955 + 0.456667090758524 NA promoter-TSS (NM_009113) promoter-TSS (NM_009113) 574 NM_011309 20193 Mm.24662 NM_011309 ENSMUSG00000044080 S100a1 AI266795|S100|S100a S100 calcium binding protein A1 protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-10 chr18 61535992 61536302 + 0.456667090758524 NA intron (NM_177828, intron 1 of 12) intron (NM_177828, intron 1 of 12) 389 NM_177828 328967 Mm.488098 NM_177828 ENSMUSG00000045094 Arhgef37 4933429F08Rik Rho guanine nucleotide exchange factor (GEF) 37 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-23 chrX 96125765 96126093 + 0.456667090758524 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 29884 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-18 chr8 77100006 77100289 + 0.456667090758524 NA intron (NM_001083906, intron 3 of 8) intron (NM_001083906, intron 3 of 8) 197639 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-13 chr3 153669727 153670120 + 0.456667090758524 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 55210 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-3 chr1 182592951 182593289 + 0.456667090758524 NA intron (NM_130890, intron 2 of 20) intron (NM_130890, intron 2 of 20) 28113 NM_130890 170725 Mm.189201 NM_130890 ENSMUSG00000038599 Capn8 nCL-2|nCL-2' calpain 8 protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-15 chr7 66653498 66654086 + 0.456667090758524 NA intron (NM_080443, intron 5 of 5) intron (NM_080443, intron 5 of 5) 35769 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-7 chr3 39269089 39269291 + 0.456667090758524 NA Intergenic Intergenic 382250 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-22 chr9 79717441 79717825 + 0.456667090758524 NA intron (NM_001290308, intron 1 of 65) intron (NM_001290308, intron 1 of 65) 1089 NM_001290308 12816 Mm.3819 NM_007730 ENSMUSG00000032332 Col12a1 - collagen, type XII, alpha 1 protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-9 chr11 69008014 69008359 + 0.456667090758524 NA intron (NM_001159519, intron 1 of 27) intron (NM_001159519, intron 1 of 27) 274 NM_001159519 237823 Mm.340288 NM_001159519 ENSMUSG00000020899 Pfas 4432409B16Rik|FGAMS|FGAR-AT|FGARAT|Gm18|PURL|Sofa phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524 chr1 16229773 16230082 + 0.456667090758524 NA intron (NM_001111272, intron 12 of 12) intron (NM_001111272, intron 12 of 12) 124045 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524 chr1 30947606 30947981 + 0.456667090758524 NA intron (NM_011200, intron 1 of 5) intron (NM_011200, intron 1 of 5) 1917 NR_002688 433406 Mm.389003 NR_002688 Gm13363 - predicted gene 13363 pseudo common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-8 chr15 100402388 100402811 + 0.456667090758524 NA intron (NM_008732, intron 10 of 16) intron (NM_008732, intron 10 of 16) 20456 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-15 chr3 28722651 28722966 + 0.456667090758524 NA intron (NM_031197, intron 8 of 10) intron (NM_031197, intron 8 of 10) 24905 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-14 chr4 31960716 31961074 + 0.456667090758524 NA Intergenic Intergenic -3212 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-8 chr5 92825074 92825408 + 0.456667090758524 NA intron (NM_001077595, intron 1 of 9) RSINE1|SINE|B4 15859 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-2 chr1 33754483 33755145 + 0.456667090758524 NA intron (NM_145392, intron 1 of 2) ID_B1|SINE|B4 2936 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-8 chr15 25556903 25557235 + 0.456667090758524 NA Intergenic Intergenic -65481 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-2 chr1 172288902 172289253 + 0.456667090758524 NA intron (NM_178405, intron 7 of 22) intron (NM_178405, intron 7 of 22) 8987 NM_178405 98660 Mm.207432 NM_178405 ENSMUSG00000007097 Atp1a2 AW060654|Atpa-3|mKIAA0778 ATPase, Na+/K+ transporting, alpha 2 polypeptide protein-coding common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-3 chr18 36678887 36679097 + 0.456667090758524 NA promoter-TSS (NM_001083317) promoter-TSS (NM_001083317) -223 NM_001360989 67843 Mm.273350 NM_026404 ENSMUSG00000033272 Slc35a4 2610030J16Rik solute carrier family 35, member A4 protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-11 chr6 146576874 146577310 + 0.456667090758524 NA promoter-TSS (NM_001347513) promoter-TSS (NM_001347513) 743 NM_001362108 71177 Mm.271774 NM_138757 ENSMUSG00000040250 Ints13 4933424B01Rik|Asun|Spata30 integrator complex subunit 13 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-2 chr1 169694433 169694794 + 0.456667090758524 NA 3' UTR (NM_009063, exon 5 of 5) 3' UTR (NM_009063, exon 5 of 5) 39112 NM_009063 19737 Mm.20954 NM_009063 ENSMUSG00000026678 Rgs5 1110070A02Rik regulator of G-protein signaling 5 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-6 chr18 62162322 62162751 + 0.456667090758524 NA Intergenic Intergenic 17445 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-16 chr3 37978804 37979095 + 0.456667090758524 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 80136 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-16 chr8 25073294 25073682 + 0.456667090758524 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 28323 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-3 chr12 85956721 85956994 + 0.456667090758524 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 122184 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524 chr11 31156259 31156840 + 0.456667090758524 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -170184 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding common_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-5 chr13 23573780 23574170 + 0.456667090758524 NA promoter-TSS (NM_178188) promoter-TSS (NM_178188) 215 NM_178195 319180 NM_178195 ENSMUSG00000069268 Hist1h2bf - histone cluster 1, H2bf protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-3 chr1 58651594 58651913 + 0.456667090758524 NA promoter-TSS (NR_045007) promoter-TSS (NR_045007) -888 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-3 chr10 18430999 18431348 + 0.456667090758524 NA intron (NM_173390, intron 1 of 6) intron (NM_173390, intron 1 of 6) 23498 NM_173390 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-9 chr15 77596194 77596598 + 0.456667090758524 NA promoter-TSS (NM_177820) promoter-TSS (NM_177820) -271 NM_177820 328561 Mm.379486 NM_177820 ENSMUSG00000050014 Apol10b 9130218O11Rik apolipoprotein L 10B protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-8 chr6 71978627 71979146 + 0.456667090758524 NA 3' UTR (NM_009088, exon 34 of 34) 3' UTR (NM_009088, exon 34 of 34) 63642 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-19 chr9 63602811 63603097 + 0.456667090758524 NA promoter-TSS (NM_001311098) promoter-TSS (NM_001311098) 308 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-12 chr7 84331289 84331730 + 0.456667090758524 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 78529 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-16 chr6 56919970 56920359 + 0.456667090758524 NA intron (NM_001360963, intron 1 of 9) PB1|SINE|Alu 3768 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|P5'N-1|P5N-1|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-12 chr2 19657144 19657520 + 0.456667090758524 NA promoter-TSS (NM_027715) promoter-TSS (NM_027715) 565 NR_033642 100041244 Mm.407223 NR_033642 Gm3230 - predicted gene 3230 ncRNA common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-2 chr17 33783159 33783410 + 0.456667090758524 NA Intergenic Intergenic -1709 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524-2 chr12 8510358 8510711 + 0.456667090758524 NA Intergenic Intergenic -10525 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-7 chr10 71126249 71126536 + 0.456667090758524 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 33298 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524 chr12 80131106 80131595 + 0.456667090758524 NA intron (NR_033514, intron 2 of 2) URR1B|DNA|hAT-Charlie 1494 NR_033514 69548 Mm.269712 NR_033514 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA unique_peak2_23_15_0.31087564644525_4.15543782322263_0.456667090758524 chr16 14483682 14483957 + 0.456667090758524 NA Intergenic Intergenic -78498 NR_033556 545280 Mm.123679 NR_033556 A630010A05Rik - RIKEN cDNA A630010A05 gene ncRNA unique_peak1_23_15_0.31087564644525_4.15543782322263_0.456667090758524-13 chr7 19332605 19332920 + 0.456667090758524 NA Intergenic Intergenic -12309 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak1_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-5 chr3 135668909 135669148 + 0.456667090758524 NA intron (NM_008689, intron 2 of 24) intron (NM_008689, intron 2 of 24) 22519 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak2_17_20_-0.493551194532812_4.14554182551236_0.456667090758524-5 chr12 85288173 85288457 + 0.456667090758524 NA promoter-TSS (NM_172414) promoter-TSS (NM_172414) -276 NM_172414 72350 Mm.158810 NM_172414 ENSMUSG00000045064 Zc2hc1c 2810002I04Rik|AV046379|Fam164c zinc finger, C2HC-type containing 1C protein-coding common_peak1_109_79_0.169849226890332_6.40685270833253_0.456612244650066-2 chr19 17011342 17012498 + 0.456612244650066 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 55802 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_96_90_-0.196184085787618_6.40970259730489_0.456612244650066 chr1 33756843 33758101 + 0.456612244650066 NA intron (NM_145392, intron 1 of 2) intron (NM_145392, intron 1 of 2) 278 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding common_peak1_109_79_0.169849226890332_6.40685270833253_0.456612244650066-4 chr8 31842555 31844241 + 0.456612244650066 NA intron (NM_178591, intron 2 of 8) intron (NM_178591, intron 2 of 8) 74805 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_95_90_-0.211028952899934_6.40228016374873_0.456612244650066 chr17 27084030 27084690 + 0.456612244650066 NA intron (NM_080553, intron 3 of 57) intron (NM_080553, intron 3 of 57) -6885 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA common_peak1_96_90_-0.196184085787618_6.40970259730489_0.456612244650066 chr19 56397298 56398187 + 0.456612244650066 NA intron (NM_007611, intron 1 of 6) intron (NM_007611, intron 1 of 6) 613 NM_007611 12369 Mm.35687 NM_007611 ENSMUSG00000025076 Casp7 AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7 caspase 7 protein-coding common_peak1_109_79_0.169849226890332_6.40685270833253_0.456612244650066-3 chr7 109575478 109576738 + 0.456612244650066 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 40460 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_109_79_0.169849226890332_6.40685270833253_0.456612244650066 chr11 59344049 59345004 + 0.456612244650066 NA Intergenic Intergenic 31127 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_95_90_-0.211028952899934_6.40228016374873_0.456612244650066-2 chr7 49553300 49554518 + 0.456612244650066 NA intron (NM_175272, intron 16 of 37) intron (NM_175272, intron 16 of 37) 82926 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_96_90_-0.196184085787618_6.40970259730489_0.456612244650066-2 chr11 95096614 95097749 + 0.456612244650066 NA Intergenic Intergenic -20370 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_91_65_0.191404202864558_6.14009622079073_0.456267329831144-3 chr6 52226641 52228009 + 0.456267329831144 NA promoter-TSS (NM_010456) promoter-TSS (NM_010456) 45 NM_010456 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding common_peak2_90_65_0.175748125097545_6.13226818190723_0.456267329831144 chr5 135393874 135394467 + 0.456267329831144 NA exon (NM_148932, exon 1 of 13) exon (NM_148932, exon 1 of 13) 376 NM_148932 107939 Mm.28399 NM_148932 ENSMUSG00000053293 Pom121 2610027A18Rik|C80273|mKIAA0618 nuclear pore membrane protein 121 protein-coding common_peak1_90_65_0.175748125097545_6.13226818190723_0.456267329831144-2 chr4 155581834 155583129 + 0.456267329831144 NA intron (NM_001355599, intron 2 of 10) intron (NM_001355599, intron 2 of 10) 18666 NM_001355599 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak2_91_65_0.191404202864558_6.14009622079073_0.456267329831144-2 chr10 117147897 117148514 + 0.456267329831144 NA intron (NM_177798, intron 1 of 9) CpG 269 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak1_90_65_0.175748125097545_6.13226818190723_0.456267329831144 chr3 34019566 34020362 + 0.456267329831144 NA promoter-TSS (NM_001113188) promoter-TSS (NM_001113188) -115 NM_008053 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak1_91_65_0.191404202864558_6.14009622079073_0.456267329831144-2 chr3 98377058 98377623 + 0.456267329831144 NA Intergenic Intergenic -5141 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_91_65_0.191404202864558_6.14009622079073_0.456267329831144 chr10 84397616 84398209 + 0.456267329831144 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 42559 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_91_65_0.191404202864558_6.14009622079073_0.456267329831144 chr19 18713231 18713809 + 0.456267329831144 NA exon (NM_177640, exon 1 of 2) exon (NM_177640, exon 1 of 2) 284 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak2_91_65_0.191404202864558_6.14009622079073_0.456267329831144-3 chr3 51483180 51484616 + 0.456267329831144 NA promoter-TSS (NM_016858) promoter-TSS (NM_016858) -68 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak1_202_150_0.131112352053074_7.30396091535161_0.456193839740535 chr8 36247145 36249349 + 0.456193839740535 NA intron (NM_001081150, intron 1 of 11) CpG 1269 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak2_183_165_-0.146296088697158_7.30189138699835_0.456193839740535 chr7 144937708 144939667 + 0.456193839740535 NA intron (NM_007631, intron 1 of 4) AT_rich|Low_complexity|Low_complexity 1238 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak1_152_112_0.14426811980293_6.89231302231665_0.455951128700267-2 chr6 121109117 121110439 + 0.455951128700267 NA intron (NM_001270475, intron 1 of 31) CpG 21244 NM_001270475 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_152_112_0.14426811980293_6.89231302231665_0.455951128700267 chr1 86434004 86435311 + 0.455951128700267 NA Intergenic CpG 8328 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393-6 chr7 66179328 66180207 + 0.455649802789393 NA Intergenic Intergenic 70252 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393-4 chr4 133614770 133615308 + 0.455649802789393 NA intron (NM_001017968, intron 3 of 7) intron (NM_001017968, intron 3 of 7) -12871 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_59_41_0.231160142847124_5.50789749420232_0.455649802789393 chr1 155558104 155558696 + 0.455649802789393 NA 5' UTR (NM_028250, exon 1 of 8) 5' UTR (NM_028250, exon 1 of 8) 280 NM_028250 72482 Mm.288249 NM_026683 ENSMUSG00000033701 Acbd6 0610010G04Rik|2610100E10Rik acyl-Coenzyme A binding domain containing 6 protein-coding common_peak1_49_49_-0.281557327622416_5.50307752596352_0.455649802789393-2 chr11 121738375 121738991 + 0.455649802789393 NA Intergenic Intergenic 36256 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_49_49_-0.281557327622416_5.50307752596352_0.455649802789393-2 chr5 33935713 33936266 + 0.455649802789393 NA intron (NM_011914, intron 1 of 10) CpG 269 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding common_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393-3 chr2 84827112 84827729 + 0.455649802789393 NA intron (NM_013899, intron 1 of 2) MIR3|SINE|MIR 399 NM_013899 30059 Mm.21826 NM_013899 ENSMUSG00000027076 Timm10 Tim13|Timm13a translocase of inner mitochondrial membrane 10 protein-coding common_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393-2 chr19 53413137 53413477 + 0.455649802789393 NA Intergenic Intergenic -22673 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_49_49_-0.281557327622416_5.50307752596352_0.455649802789393 chr10 23786567 23787090 + 0.455649802789393 NA exon (NM_011295, exon 3 of 6) exon (NM_011295, exon 3 of 6) 381 NM_011295 20042 Mm.371846 NM_011295 ENSMUSG00000061983 Rps12 - ribosomal protein S12 protein-coding common_peak2_49_49_-0.281557327622416_5.50307752596352_0.455649802789393-3 chr6 83794976 83795606 + 0.455649802789393 NA 5' UTR (NM_001164187, exon 1 of 10) 5' UTR (NM_001164187, exon 1 of 10) 133 NM_001164187 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak2_49_49_-0.281557327622416_5.50307752596352_0.455649802789393 chr3 27689349 27690074 + 0.455649802789393 NA intron (NM_001356953, intron 1 of 26) ID_B1|SINE|B4 20741 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_49_49_-0.281557327622416_5.50307752596352_0.455649802789393-3 chr5 138161182 138161657 + 0.455649802789393 NA exon (NM_012002, exon 2 of 10) exon (NM_012002, exon 2 of 10) 317 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding unique_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393 chr3 117866264 117867067 + 0.455649802789393 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 2271 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding common_peak2_59_41_0.231160142847124_5.50789749420232_0.455649802789393-3 chr8 3414911 3415618 + 0.455649802789393 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 22256 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393-5 chr6 86438094 86438601 + 0.455649802789393 NA promoter-TSS (NM_146170) promoter-TSS (NM_146170) -51 NM_146170 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding common_peak2_59_41_0.231160142847124_5.50789749420232_0.455649802789393-2 chr6 50565759 50566436 + 0.455649802789393 NA promoter-TSS (NR_015581) promoter-TSS (NR_015581) 377 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak1_59_41_0.231160142847124_5.50789749420232_0.455649802789393 chr11 121735446 121736379 + 0.455649802789393 NA Intergenic Intergenic 33485 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-2 chr14 27823345 27823926 + 0.455501615909292 NA intron (NM_001347497, intron 4 of 19) intron (NM_001347497, intron 4 of 19) 201228 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-3 chr18 36560661 36561208 + 0.455501615909292 NA exon (NM_175375, exon 1 of 34) exon (NM_175375, exon 1 of 34) 331 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak2_37_38_-0.316238764317101_5.1272828367037_0.455501615909292-3 chr8 36668126 36668730 + 0.455501615909292 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -54485 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292 chr1 58857405 58858065 + 0.455501615909292 NA Intergenic Intergenic 55233 NM_001277926 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-8 chr8 26688388 26688709 + 0.455501615909292 NA Intergenic Intergenic 135875 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_37_38_-0.316238764317101_5.1272828367037_0.455501615909292 chr10 71159913 71160581 + 0.455501615909292 NA promoter-TSS (NM_001347189) promoter-TSS (NM_001347189) -557 NM_001347189 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-5 chr5 64111905 64112273 + 0.455501615909292 NA exon (NM_001356964, exon 13 of 15) exon (NM_001356964, exon 13 of 15) 19150 NM_001356964 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak2_37_38_-0.316238764317101_5.1272828367037_0.455501615909292 chr12 108371033 108371565 + 0.455501615909292 NA 5' UTR (NM_001286346, exon 1 of 22) 5' UTR (NM_001286346, exon 1 of 22) 146 NM_001286346 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292 chr1 82596913 82597263 + 0.455501615909292 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 10167 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-2 chr14 27823356 27823938 + 0.455501615909292 NA intron (NM_001347497, intron 4 of 19) intron (NM_001347497, intron 4 of 19) 201240 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding common_peak1_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-4 chr2 153436934 153437619 + 0.455501615909292 NA intron (NM_001134300, intron 4 of 10) intron (NM_001134300, intron 4 of 10) 7203 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_37_38_-0.316238764317101_5.1272828367037_0.455501615909292-2 chr5 146703856 146704394 + 0.455501615909292 NA Intergenic Intergenic 90831 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-7 chr7 139844066 139844809 + 0.455501615909292 NA intron (NM_177469, intron 3 of 7) intron (NM_177469, intron 3 of 7) 10263 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-4 chr18 83816547 83817146 + 0.455501615909292 NA Intergenic Intergenic 269716 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak1_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-3 chr2 151976099 151976616 + 0.455501615909292 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) -2376 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-6 chr9 67208765 67209347 + 0.455501615909292 NA Intergenic B3A|SINE|B2 27670 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak1_36_38_-0.354441477804807_5.10818147995985_0.455501615909292 chr11 6267209 6267711 + 0.455501615909292 NA exon (NM_026538, exon 2 of 14) exon (NM_026538, exon 2 of 14) 269 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding common_peak1_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-5 chr9 20644131 20644629 + 0.455501615909292 NA promoter-TSS (NM_001310746) promoter-TSS (NM_001310746) 387 NM_001002846 30843 Mm.24608 NM_013911 ENSMUSG00000066892 Fbxl12 3110048D16Rik|Fbl12 F-box and leucine-rich repeat protein 12 protein-coding common_peak2_37_38_-0.316238764317101_5.1272828367037_0.455501615909292-2 chr17 27057350 27057989 + 0.455501615909292 NA exon (NM_080553, exon 1 of 58) exon (NM_080553, exon 1 of 58) 365 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding common_peak2_36_38_-0.354441477804807_5.10818147995985_0.455501615909292-6 chr6 34708159 34708581 + 0.455501615909292 NA intron (NM_001347100, intron 3 of 13) intron (NM_001347100, intron 3 of 13) -1074 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286 chr11 35969939 35970419 + 0.455501615909286 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 9910 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_45_31_0.242853301796255_5.12142665089813_0.455501615909286-2 chr18 33666520 33667038 + 0.455501615909286 NA Intergenic Intergenic -128113 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA common_peak2_45_31_0.242853301796255_5.12142665089813_0.455501615909286-3 chr19 5272569 5272948 + 0.455501615909286 NA exon (NM_153129, exon 1 of 24) exon (NM_153129, exon 1 of 24) 361 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286-6 chr2 93907898 93908500 + 0.455501615909286 NA Intergenic Intergenic -39042 NM_001033452 381411 Mm.9889 NM_001033452 ENSMUSG00000075023 Accsl Gm1967 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like protein-coding common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286-3 chr11 75399580 75400368 + 0.455501615909286 NA intron (NM_001102611, intron 6 of 10) intron (NM_001102611, intron 6 of 10) 22649 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak2_45_31_0.242853301796255_5.12142665089813_0.455501615909286 chr11 102406906 102407466 + 0.455501615909286 NA intron (NM_026542, intron 1 of 11) intron (NM_026542, intron 1 of 11) 331 NM_026542 68066 Mm.44226 NM_026542 ENSMUSG00000018677 Slc25a39 3010027G13Rik|D11Ertd333e solute carrier family 25, member 39 protein-coding common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286-7 chr7 99381754 99382284 + 0.455501615909286 NA 5' UTR (NM_001362166, exon 1 of 19) 5' UTR (NM_001362166, exon 1 of 19) 501 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286-4 chr12 113142049 113142594 + 0.455501615909286 NA intron (NM_001347443, intron 1 of 6) intron (NM_001347443, intron 1 of 6) 1716 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding unique_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286 chr19 60944643 60945382 + 0.455501615909286 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 55263 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286-5 chr17 35994289 35994723 + 0.455501615909286 NA promoter-TSS (NR_015618) promoter-TSS (NR_015618) 2 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak1_45_31_0.242853301796255_5.12142665089813_0.455501615909286-2 chr11 51763725 51764244 + 0.455501615909286 NA intron (NM_025535, intron 1 of 6) intron (NM_025535, intron 1 of 6) 321 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak1_210_188_-0.137355470062436_7.49356468918985_0.455496688144006 chr16 10976716 10979373 + 0.455496688144006 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 15077 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_291_219_0.108945762894779_7.83583259497205_0.455358917837583 chr1 132007261 132009460 + 0.455358917837583 NA intron (NM_007923, intron 1 of 4) CpG 755 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak2_159_145_-0.161292554628075_7.10917828156598_0.455302203899196 chr19 18630580 18632276 + 0.455302203899196 NA promoter-TSS (NM_145497) promoter-TSS (NM_145497) 385 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_177_131_0.13685812746823_7.11282318309257_0.455302203899196 chr6 108537407 108539509 + 0.455302203899196 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 48715 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_184_166_-0.14719661180922_7.31010598656944_0.455214154036618 chr5 36225313 36227349 + 0.455214154036618 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) 22310 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_97_91_-0.197258792264202_6.42493255992491_0.454790037721445 chr15 74622532 74622966 + 0.454790037721445 NA intron (NM_001177437, intron 11 of 26) intron (NM_001177437, intron 11 of 26) 13569 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding common_peak2_97_91_-0.197258792264202_6.42493255992491_0.454790037721445 chr7 67968739 67969719 + 0.454790037721445 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 16972 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_153_113_0.140889458433204_6.90333474338134_0.454653431189891 chr1 89454821 89456567 + 0.454653431189891 NA intron (NM_001037136, intron 1 of 16) CpG 883 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_137_126_-0.1720507623217_6.90265930561132_0.454653431189891 chr12 86832495 86833782 + 0.454653431189891 NA Intergenic Intergenic 51676 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_137_126_-0.1720507623217_6.90265930561132_0.454653431189891 chr1 62705995 62708227 + 0.454653431189891 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 3794 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_212_189_-0.131454243970006_7.50412848634594_0.454642723043947 chr18 61952482 61954465 + 0.454642723043947 NA intron (NM_172628, intron 1 of 16) intron (NM_172628, intron 1 of 16) 398 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak2_131_96_0.153043183064142_6.6764344337192_0.454398920621993 chr3 135691357 135692354 + 0.454398920621993 NA promoter-TSS (NM_008689) promoter-TSS (NM_008689) -308 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_131_96_0.153043183064142_6.6764344337192_0.454398920621993 chr15 5194828 5196004 + 0.454398920621993 NA intron (NM_001355621, intron 3 of 5) intron (NM_001355621, intron 3 of 5) 9856 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_185_167_-0.148087260571769_7.31827379249288_0.454246766485101 chr7 133121774 133123378 + 0.454246766485101 NA intron (NM_009980, intron 1 of 10) CpG 907 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_75_53_0.207220972808434_5.85849798856769_0.454133694090049-2 chr15 5536860 5537419 + 0.454133694090049 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 40821 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_75_53_0.207220972808434_5.85849798856769_0.454133694090049-3 chr15 11399006 11399596 + 0.454133694090049 NA intron (NM_033074, intron 1 of 18) intron (NM_033074, intron 1 of 18) 357 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_75_53_0.207220972808434_5.85849798856769_0.454133694090049-2 chr17 34605658 34606705 + 0.454133694090049 NA intron (NM_001163379, intron 1 of 6) intron (NM_001163379, intron 1 of 6) 320 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak2_74_53_0.188246962216295_5.84901098327162_0.454133694090049 chr17 71616311 71617071 + 0.454133694090049 NA intron (NM_175639, intron 1 of 17) CpG 476 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding common_peak1_74_53_0.188246962216295_5.84901098327162_0.454133694090049-2 chr6 146527909 146528778 + 0.454133694090049 NA Intergenic Intergenic -26120 NM_019923 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_75_53_0.207220972808434_5.85849798856769_0.454133694090049 chr16 32657160 32657911 + 0.454133694090049 NA intron (NM_001110147, intron 1 of 13) intron (NM_001110147, intron 1 of 13) 10662 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak2_74_53_0.188246962216295_5.84901098327162_0.454133694090049-2 chr5 110807875 110808966 + 0.454133694090049 NA intron (NM_001347394, intron 3 of 27) intron (NM_001347394, intron 3 of 27) 1661 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding common_peak1_74_53_0.188246962216295_5.84901098327162_0.454133694090049 chr2 60691496 60692195 + 0.454133694090049 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -18152 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_75_53_0.207220972808434_5.85849798856769_0.454133694090049-4 chr6 127993185 127994383 + 0.454133694090049 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 106162 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak1_75_53_0.207220972808434_5.85849798856769_0.454133694090049 chr11 75653177 75653928 + 0.454133694090049 NA intron (NM_001080774, intron 1 of 31) intron (NM_001080774, intron 1 of 31) 1402 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak2_63_62_-0.261349838428609_5.84660500428561_0.454133694090037 chr4 123749618 123750257 + 0.454133694090037 NA intron (NM_023423, intron 1 of 4) CpG 362 NM_023423 68050 Mm.27903 NM_023423 ENSMUSG00000023075 Akirin1 6330407G11Rik akirin 1 protein-coding common_peak2_64_62_-0.239139829864169_5.85771000856783_0.454133694090037-3 chr16 45966774 45967578 + 0.454133694090037 NA intron (NR_152226, intron 2 of 2) intron (NR_152226, intron 2 of 2) 21570 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak1_63_62_-0.261349838428609_5.84660500428561_0.454133694090037 chr9 45938082 45939070 + 0.454133694090037 NA TTS (NR_106055) TTS (NR_106055) 1014 NR_106055 102465659 NR_106055 ENSMUSG00000098327 Mir7087 Gm27273|mmu-mir-7087 microRNA 7087 ncRNA common_peak2_64_62_-0.239139829864169_5.85771000856783_0.454133694090037-2 chr12 98282445 98283021 + 0.454133694090037 NA Intergenic Intergenic 14098 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak2_64_62_-0.239139829864169_5.85771000856783_0.454133694090037 chr1 177257197 177258327 + 0.454133694090037 NA Intergenic CpG -8995 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak1_64_62_-0.239139829864169_5.85771000856783_0.454133694090037 chr1 36691638 36692460 + 0.454133694090037 NA intron (NM_009942, intron 1 of 3) intron (NM_009942, intron 1 of 3) 562 NM_009942 12859 Mm.180182 NM_009942 ENSMUSG00000061518 Cox5b - cytochrome c oxidase subunit Vb protein-coding common_peak1_64_62_-0.239139829864169_5.85771000856783_0.454133694090037-2 chr11 4262367 4262870 + 0.454133694090037 NA intron (NM_008501, intron 1 of 3) intron (NM_008501, intron 1 of 3) -4178 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_92_66_0.185195951322465_6.158687166119_0.45407723665872 chr12 112580278 112581440 + 0.45407723665872 NA Intergenic Intergenic -7925 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_92_66_0.185195951322465_6.158687166119_0.45407723665872-3 chr6 147199265 147200158 + 0.45407723665872 NA intron (NR_033640, intron 2 of 2) intron (NR_033640, intron 2 of 2) 19470 NR_033640 100039641 Mm.170402 NR_033640 ENSMUSG00000085600 E330012B07Rik Gm15768 RIKEN cDNA E330012B07 gene ncRNA common_peak2_92_66_0.185195951322465_6.158687166119_0.45407723665872 chr2 118388608 118389322 + 0.45407723665872 NA promoter-TSS (NM_001177806) promoter-TSS (NM_001177806) -147 NM_001177806 27103 Mm.217616 NM_013719 ENSMUSG00000005102 Eif2ak4 2610011M03|GCN2|MGCN2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding common_peak2_92_66_0.185195951322465_6.158687166119_0.45407723665872-2 chr6 113062656 113063441 + 0.45407723665872 NA intron (NM_008188, intron 5 of 9) intron (NM_008188, intron 5 of 9) 14196 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak1_80_76_-0.213404087567287_6.16008449691126_0.45407723665872 chr19 44908293 44909008 + 0.45407723665872 NA Intergenic Intergenic -22469 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_139_127_-0.162753966600684_6.91862301669966_0.453377303904507 chr4 109977602 109978980 + 0.453377303904507 NA 5' UTR (NM_172296, exon 1 of 3) 5' UTR (NM_172296, exon 1 of 3) 266 NM_172296 242620 Mm.32825 NM_172296 ENSMUSG00000047143 Dmrta2 Dmrt5 doublesex and mab-3 related transcription factor like family A2 protein-coding common_peak1_162_147_-0.154310375904526_7.13229817767669_0.453096462361606 chr17 6826975 6828783 + 0.453096462361606 NA Intergenic CpG -45099 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_112_81_0.172770697042168_6.44393735313917_0.453010049212859 chr8 86901441 86902091 + 0.453010049212859 NA Intergenic Intergenic -16508 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_98_92_-0.198312204056062_6.44000270908_0.453010049212859 chr10 91181266 91182549 + 0.453010049212859 NA Intergenic CpG -10288 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_234_175_0.119776624272147_7.51931993077337_0.452962818744474 chr14 54221436 54223967 + 0.452962818744474 NA Intergenic (CCCCCA)n|Simple_repeat|Simple_repeat 31228 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_132_97_0.149057680430825_6.68923868433062_0.452908205752178 chr11 3647895 3649001 + 0.452908205752178 NA promoter-TSS (NR_002322) promoter-TSS (NR_002322) 366 NR_002321 544752 Mm.390314 NR_002321 ENSMUSG00000056579 Tug1 AI316828 taurine upregulated gene 1 ncRNA common_peak1_118_109_-0.176924786187322_6.692897320431_0.452908205752178-2 chr5 103775088 103776283 + 0.452908205752178 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 21112 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_118_109_-0.176924786187322_6.692897320431_0.452908205752178 chr11 62820551 62821898 + 0.452908205752178 NA intron (NM_053169, intron 1 of 5) intron (NM_053169, intron 1 of 5) 971 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding common_peak2_132_97_0.149057680430825_6.68923868433062_0.452908205752178 chr3 145650085 145651347 + 0.452908205752178 NA promoter-TSS (NM_010516) promoter-TSS (NM_010516) -731 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_118_109_-0.176924786187322_6.692897320431_0.452908205752178 chr7 30956714 30958303 + 0.452908205752178 NA promoter-TSS (NM_011680) promoter-TSS (NM_011680) -705 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding common_peak2_244_216_-0.122646149471033_7.70022815770896_0.452290514830593 chr19 58103235 58106592 + 0.452290514830593 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 53746 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_60_42_0.220891314600778_5.53671041200249_0.452279894471924-3 chr2 3332074 3332576 + 0.452279894471924 NA intron (NM_001013376, intron 1 of 1) CpG 303 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding common_peak2_60_42_0.220891314600778_5.53671041200249_0.452279894471924 chr1 74036352 74036953 + 0.452279894471924 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 87795 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_60_42_0.220891314600778_5.53671041200249_0.452279894471924 chr1 13659687 13660426 + 0.452279894471924 NA intron (NM_145381, intron 1 of 6) B1F1|SINE|Alu 453 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak1_60_42_0.220891314600778_5.53671041200249_0.452279894471924-5 chr3 37747974 37748613 + 0.452279894471924 NA Intergenic Intergenic -23933 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_60_42_0.220891314600778_5.53671041200249_0.452279894471924-6 chr6 39573560 39574398 + 0.452279894471924 NA 5' UTR (NM_178873, exon 1 of 8) 5' UTR (NM_178873, exon 1 of 8) 103 NM_178873 57869 Mm.247957 NM_178873 ENSMUSG00000046947 Adck2 AA408112|BB006057 aarF domain containing kinase 2 protein-coding common_peak2_50_50_-0.281758882407589_5.5315459007677_0.452279894471924-2 chr2 84650864 84651403 + 0.452279894471924 NA promoter-TSS (NM_007615) promoter-TSS (NM_007615) -393 NM_001355066 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak2_50_50_-0.281758882407589_5.5315459007677_0.452279894471924-3 chrX 164012868 164013288 + 0.452279894471924 NA intron (NM_181315, intron 2 of 7) intron (NM_181315, intron 2 of 7) 14932 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_60_42_0.220891314600778_5.53671041200249_0.452279894471924-4 chr2 31572796 31573614 + 0.452279894471924 NA intron (NM_001290548, intron 1 of 18) intron (NM_001290548, intron 1 of 18) 554 NM_001290548 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding common_peak1_50_50_-0.281758882407589_5.5315459007677_0.452279894471924 chr11 86601117 86601759 + 0.452279894471924 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -17280 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_50_50_-0.281758882407589_5.5315459007677_0.452279894471924-2 chr3 121704340 121705097 + 0.452279894471924 NA Intergenic Intergenic -18819 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_60_42_0.220891314600778_5.53671041200249_0.452279894471924-2 chr10 85957048 85957741 + 0.452279894471924 NA intron (NM_145422, intron 1 of 11) intron (NM_145422, intron 1 of 11) 399 NM_145422 28088 Mm.9257 NM_145422 ENSMUSG00000001783 Rtcb AI255213|AI463255|D10Wsu52e|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding common_peak2_50_50_-0.281758882407589_5.5315459007677_0.452279894471924 chr2 52955427 52955921 + 0.452279894471924 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 97806 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak2_163_148_-0.155263932434967_7.14153655424468_0.452017086184721 chr14 26638107 26639498 + 0.452017086184721 NA intron (NM_007479, intron 1 of 5) intron (NM_007479, intron 1 of 5) 668 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding common_peak1_93_67_0.179143482478471_6.17703458248957_0.451948128797766-3 chr6 72615441 72616679 + 0.451948128797766 NA exon (NM_009444, exon 2 of 4) exon (NM_009444, exon 2 of 4) 688 NM_009444 22135 Mm.246563 NM_009444 Tgoln2 TGN38B|TGN41|TGN46|Ttgn2 trans-golgi network protein 2 protein-coding common_peak1_81_77_-0.214442651261811_6.17818089323134_0.451948128797766 chr14 20707344 20708222 + 0.451948128797766 NA 5' UTR (NM_001252081, exon 1 of 26) 5' UTR (NM_001252081, exon 1 of 26) 231 NM_001252082 268721 Mm.275082 NM_027996 ENSMUSG00000021819 Zswim8 2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913 zinc finger SWIM-type containing 8 protein-coding common_peak1_81_77_-0.214442651261811_6.17818089323134_0.451948128797766-3 chr3 96635276 96636207 + 0.451948128797766 NA promoter-TSS (NM_001162388) promoter-TSS (NM_001162388) -106 NM_001162388 18632 Mm.20901 NM_011069 ENSMUSG00000028102 Pex11b PEX11beta|Pex11pbeta peroxisomal biogenesis factor 11 beta protein-coding common_peak2_81_77_-0.214442651261811_6.17818089323134_0.451948128797766 chr10 16544490 16545352 + 0.451948128797766 NA Intergenic Intergenic 550861 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_93_67_0.179143482478471_6.17703458248957_0.451948128797766 chr15 98568056 98568903 + 0.451948128797766 NA promoter-TSS (NM_009833) promoter-TSS (NM_009833) -843 NM_009833 12455 Mm.29941 NM_009833 ENSMUSG00000011960 Ccnt1 2810478G24Rik|AI115585|CycT1 cyclin T1 protein-coding common_peak1_93_67_0.179143482478471_6.17703458248957_0.451948128797766-2 chr3 9524846 9526053 + 0.451948128797766 NA intron (NM_133218, intron 2 of 8) B1_Mm|SINE|Alu 84636 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak1_81_77_-0.214442651261811_6.17818089323134_0.451948128797766-2 chr2 130273739 130274258 + 0.451948128797766 NA promoter-TSS (NM_024193) promoter-TSS (NM_024193) -414 NM_024193 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-6 chr9 6539308 6539899 + 0.451698068655807 NA Intergenic Intergenic -273056 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_34_23_0.266393491824648_4.71815924663348_0.451698068655807-6 chr8 120317062 120317442 + 0.451698068655807 NA Intergenic MIR|SINE|MIR -89022 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-3 chr15 77904074 77904533 + 0.451698068655807 NA Intergenic Intergenic 24691 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-8 chr5 32784878 32785573 + 0.451698068655807 NA intron (NM_177298, intron 1 of 7) intron (NM_177298, intron 1 of 7) 401 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak2_34_23_0.266393491824648_4.71815924663348_0.451698068655807-2 chr15 85699659 85700137 + 0.451698068655807 NA Intergenic Intergenic -3875 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807 chr1 75247818 75248143 + 0.451698068655807 NA intron (NM_001359281, intron 21 of 22) intron (NM_001359281, intron 21 of 22) 11278 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-8 chr2 127256374 127257037 + 0.451698068655807 NA intron (NM_175145, intron 3 of 3) ID4|SINE|ID 8730 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding unique_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807 chr2 119288859 119289166 + 0.451698068655807 NA 5' UTR (NM_172269, exon 1 of 5) 5' UTR (NM_172269, exon 1 of 5) 270 NM_172269 228545 Mm.294761 NM_172269 ENSMUSG00000034216 Vps18 9930024E13Rik VPS18 CORVET/HOPS core subunit protein-coding unique_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807 chr5 115525280 115525960 + 0.451698068655807 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 18944 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-14 chr9 122865736 122866066 + 0.451698068655807 NA intron (NM_001359935, intron 1 of 6) CpG 105 NM_001359935 235682 Mm.326477 NM_173364 ENSMUSG00000047036 Zfp445 AW610627|ZNF168|Znf445|mszf29|mszf50 zinc finger protein 445 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-12 chr7 110221787 110222359 + 0.451698068655807 NA intron (NM_009302, intron 1 of 11) CpG 370 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding unique_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-2 chr8 70642926 70643320 + 0.451698068655807 NA Intergenic Intergenic -10667 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-6 chr18 46404245 46404765 + 0.451698068655807 NA Intergenic Intergenic 61311 NR_045438 72076 Mm.82766 NM_028086 Mospd4 2010013H21Rik motile sperm domain containing 4 pseudo common_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-4 chr2 168006084 168006634 + 0.451698068655807 NA intron (NM_001080708, intron 1 of 21) intron (NM_001080708, intron 1 of 21) 4234 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Ripor3 2310033K02Rik|Fam65c|Gm124 RIPOR family member 3 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-12 chr8 36457489 36457891 + 0.451698068655807 NA Intergenic Intergenic -31501 NM_176952 319582 Mm.180924 NM_176952 ENSMUSG00000039620 6430573F11Rik Kiaa1456|TRM9L|Trmt9b RIKEN cDNA 6430573F11 gene protein-coding unique_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-2 chr3 65872091 65872615 + 0.451698068655807 NA Intergenic Intergenic 85896 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807 chr11 106778988 106779400 + 0.451698068655807 NA non-coding (NR_027785, exon 1 of 8) non-coding (NR_027785, exon 1 of 8) 272 NM_001353435 50776 Mm.859 NM_015810 ENSMUSG00000020718 Polg2 mtPolB|p55|polG-beta polymerase (DNA directed), gamma 2, accessory subunit protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-13 chr8 66486633 66487018 + 0.451698068655807 NA promoter-TSS (NM_025465) promoter-TSS (NM_025465) -295 NM_001357208 66282 Mm.294985 NM_025465 ENSMUSG00000025591 Tma16 1810029B16Rik translation machinery associated 16 protein-coding unique_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807 chr13 34112708 34113213 + 0.451698068655807 NA intron (NR_046184, intron 1 of 4) ORR1F|LTR|ERVL-MaLR 312 NR_046184 432745 Mm.159104 NR_046184 ENSMUSG00000113591 4930447K03Rik - RIKEN cDNA 4930447K03 gene ncRNA common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-6 chr2 93217563 93217991 + 0.451698068655807 NA intron (NM_183180, intron 5 of 9) intron (NM_183180, intron 5 of 9) 30229 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-11 chr6 6172976 6173263 + 0.451698068655807 NA intron (NM_001177572, intron 3 of 17) Charlie1b|DNA|hAT-Charlie 44054 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak2_34_23_0.266393491824648_4.71815924663348_0.451698068655807 chr11 61956820 61957183 + 0.451698068655807 NA intron (NM_001310526, intron 1 of 7) CpG 238 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-7 chr2 102551656 102552144 + 0.451698068655807 NA intron (NM_173749, intron 1 of 10) intron (NM_173749, intron 1 of 10) 1879 NM_173749 210622 Mm.28649 NM_173749 ENSMUSG00000027188 Pamr1 5930437L24|E430002G05Rik|Ramp peptidase domain containing associated with muscle regeneration 1 protein-coding common_peak2_34_23_0.266393491824648_4.71815924663348_0.451698068655807-3 chr3 123052998 123053299 + 0.451698068655807 NA Intergenic Intergenic -18161 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-10 chr5 136585133 136585595 + 0.451698068655807 NA Intergenic Intergenic -17874 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-10 chr5 124579191 124579833 + 0.451698068655807 NA promoter-TSS (NM_145371) promoter-TSS (NM_145371) 364 NM_181410 209357 Mm.185467 NM_181410 ENSMUSG00000029387 Gtf2h3 34kDa|5033417D07Rik|BTF2|BTF2 p34|C730029A10|D5Ertd679e|TFIIH general transcription factor IIH, polypeptide 3 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807 chr10 24458463 24458801 + 0.451698068655807 NA Intergenic Intergenic -136810 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-5 chr7 66602252 66602899 + 0.451698068655807 NA Intergenic Intergenic 86986 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_34_23_0.266393491824648_4.71815924663348_0.451698068655807-5 chr5 36978476 36978896 + 0.451698068655807 NA intron (NM_011716, intron 2 of 7) intron (NM_011716, intron 2 of 7) 10296 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-7 chr19 44914680 44914957 + 0.451698068655807 NA Intergenic Intergenic -16301 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-4 chr15 103378688 103378974 + 0.451698068655807 NA Intergenic Intergenic -12040 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-2 chr13 17694488 17694790 + 0.451698068655807 NA promoter-TSS (NM_025479) promoter-TSS (NM_025479) 126 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-9 chr4 150508292 150508829 + 0.451698068655807 NA intron (NM_001085492, intron 8 of 22) intron (NM_001085492, intron 8 of 22) 143614 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-4 chr14 20885415 20886080 + 0.451698068655807 NA Intergenic Intergenic -43651 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-5 chr16 26082375 26082860 + 0.451698068655807 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 23167 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding common_peak2_34_23_0.266393491824648_4.71815924663348_0.451698068655807-4 chr4 150569633 150570094 + 0.451698068655807 NA intron (NM_001085492, intron 11 of 22) CpG 82311 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-3 chr11 86962245 86962685 + 0.451698068655807 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 31297 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-5 chr17 15023858 15024185 + 0.451698068655807 NA Intergenic CpG -13837 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-13 chr9 111271060 111271522 + 0.451698068655807 NA promoter-TSS (NM_175266) promoter-TSS (NM_175266) 317 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak1_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-3 chr15 95823096 95823476 + 0.451698068655807 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 6786 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak2_27_29_-0.375191501816594_4.71929484470022_0.451698068655807-2 chr10 80578043 80578449 + 0.451698068655807 NA promoter-TSS (NM_078477) promoter-TSS (NM_078477) -950 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-9 chr5 48372378 48372740 + 0.451698068655807 NA intron (NM_025755, intron 1 of 8) CpG 167 NM_025755 66768 Mm.29409 NM_025755 ENSMUSG00000029089 Pacrgl 4933428G09Rik PARK2 co-regulated-like protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-2 chr11 69396535 69396990 + 0.451698068655807 NA TTS (NM_030083) TTS (NM_030083) 971 NM_030083 78304 Mm.45683 NM_030083 ENSMUSG00000059278 Naa38 1500034E06Rik|Lsmd1 N(alpha)-acetyltransferase 38, NatC auxiliary subunit protein-coding common_peak1_34_23_0.266393491824648_4.71815924663348_0.451698068655807-11 chr7 112056241 112056919 + 0.451698068655807 NA exon (NM_177249, exon 5 of 29) exon (NM_177249, exon 5 of 29) 33074 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak1_266_200_0.111036157875212_7.70656977011653_0.451564641414398 chr2 173259752 173261452 + 0.451564641414398 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 15931 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_76_54_0.199474738646529_5.88109708284792_0.451511310064814 chr10 83337011 83337875 + 0.451511310064814 NA intron (NM_177388, intron 1 of 10) CpG 374 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak2_65_63_-0.239988995175485_5.88000550241226_0.451511310064814 chr9 79759345 79760334 + 0.451511310064814 NA promoter-TSS (NM_009945) promoter-TSS (NM_009945) 14 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding common_peak2_76_54_0.199474738646529_5.88109708284792_0.451511310064814-2 chr16 57671988 57672760 + 0.451511310064814 NA intron (NM_007739, intron 2 of 3) intron (NM_007739, intron 2 of 3) -65507 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak1_65_63_-0.239988995175485_5.88000550241226_0.451511310064814-3 chrX 164012445 164013288 + 0.451511310064814 NA intron (NM_181315, intron 2 of 7) B2_Mm2|SINE|B2 15144 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak2_76_54_0.199474738646529_5.88109708284792_0.451511310064814 chr10 79908656 79909118 + 0.451511310064814 NA promoter-TSS (NM_001359629) promoter-TSS (NM_001359629) 51 NM_001163276 216154 Mm.260089 NM_198107 ENSMUSG00000013833 Med16 95kDa|A630083L04|DRIP92|Thrap5|Trap95 mediator complex subunit 16 protein-coding common_peak1_65_63_-0.239988995175485_5.88000550241226_0.451511310064814-2 chr7 29982997 29983649 + 0.451511310064814 NA promoter-TSS (NM_001167873) promoter-TSS (NM_001167873) -632 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak1_65_63_-0.239988995175485_5.88000550241226_0.451511310064814 chr15 79027877 79028364 + 0.451511310064814 NA promoter-TSS (NM_008197) promoter-TSS (NM_008197) -92 NM_008197 14958 Mm.24350 NM_008197 ENSMUSG00000096210 H1f0 D130017D06Rik|H1(0)|H1fv H1 histone family, member 0 protein-coding common_peak1_134_98_0.155792150001185_6.7072526950802_0.451446206786942 chr2 70661612 70662655 + 0.451446206786942 NA intron (NM_027352, intron 1 of 9) intron (NM_027352, intron 1 of 9) 624 NM_027352 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding common_peak1_208_155_0.125841614488919_7.34832302610671_0.451416119025556 chr1 43167461 43168666 + 0.451416119025556 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) -4102 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_208_155_0.125841614488919_7.34832302610671_0.451416119025556-2 chr18 3336585 3338390 + 0.451416119025556 NA 5' UTR (NM_001110852, exon 1 of 4) 5' UTR (NM_001110852, exon 1 of 4) 102 NM_001110851 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak2_113_82_0.167904645852432_6.45899175427314_0.451270827739867 chr4 141301235 141302119 + 0.451270827739867 NA intron (NM_010139, intron 1 of 16) CpG 456 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_99_93_-0.199344969098574_6.45491636712835_0.451270827739842-2 chr19 5929329 5930368 + 0.451270827739842 NA Intergenic Intergenic -5032 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_99_93_-0.199344969098574_6.45491636712835_0.451270827739842 chr4 94978656 94979661 + 0.451270827739842 NA promoter-TSS (NM_177239) promoter-TSS (NM_177239) -58 NM_177239 320713 Mm.208868 NM_177239 ENSMUSG00000062627 Mysm1 C130067A03Rik|C530050H10Rik myb-like, SWIRM and MPN domains 1 protein-coding common_peak1_99_93_-0.199344969098574_6.45491636712835_0.451270827739842 chr12 55079947 55081154 + 0.451270827739842 NA promoter-TSS (NM_028314) promoter-TSS (NM_028314) 54 NM_011899 24067 Mm.471968 NM_011899 ENSMUSG00000073079 Srp54a 54kDa|Srp54 signal recognition particle 54A protein-coding common_peak2_99_93_-0.199344969098574_6.45491636712835_0.451270827739842-3 chr8 64521725 64522648 + 0.451270827739842 NA Intergenic Intergenic -7745 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_99_93_-0.199344969098574_6.45491636712835_0.451270827739842-3 chr9 96630740 96632069 + 0.451270827739842 NA promoter-TSS (NM_053268) promoter-TSS (NM_053268) 99 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding common_peak2_99_93_-0.199344969098574_6.45491636712835_0.451270827739842-2 chr4 123572497 123573701 + 0.451270827739842 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -43321 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-4 chr8 70713651 70714217 + 0.451135909022758 NA Intergenic Intergenic -4609 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-5 chr16 4684263 4684585 + 0.451135909022758 NA intron (NM_001135112, intron 1 of 10) intron (NM_001135112, intron 1 of 10) 354 NM_001135112 83945 Mm.248337 NM_023646 ENSMUSG00000004069 Dnaja3 1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l DnaJ heat shock protein family (Hsp40) member A3 protein-coding common_peak1_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-2 chr12 16870731 16871222 + 0.451135909022758 NA Intergenic Intergenic -24002 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak1_38_39_-0.315554318204794_5.16415093578497_0.451135909022758 chr10 80961339 80961687 + 0.451135909022758 NA intron (NM_001038655, intron 2 of 3) intron (NM_001038655, intron 2 of 3) 31422 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758 chr9 31320657 31321493 + 0.451135909022758 NA intron (NM_001080817, intron 3 of 20) (TCTG)n|Simple_repeat|Simple_repeat 5968 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-6 chr3 98417937 98418502 + 0.451135909022758 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 35738 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758 chr1 128357801 128358475 + 0.451135909022758 NA intron (NM_008567, intron 1 of 16) URR1A|DNA|hAT-Charlie 1567 NM_001313695 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-9 chr9 30427082 30427574 + 0.451135909022758 NA promoter-TSS (NM_028874) promoter-TSS (NM_028874) -1 NM_028874 102607 Mm.35084 NM_028874 ENSMUSG00000031993 Snx19 3526401K03Rik|AI195321|AI848208|mKIAA0254 sorting nexin 19 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-4 chr15 99584524 99584929 + 0.451135909022758 NA TTS (NM_009699) TTS (NM_009699) 5670 NM_009699 11827 Mm.20206 NM_009699 ENSMUSG00000023013 Aqp2 AQP-CD|WCH-CD|cph|jpk aquaporin 2 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-8 chr8 72137225 72137827 + 0.451135909022758 NA intron (NM_001001491, intron 1 of 7) intron (NM_001001491, intron 1 of 7) 2234 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-3 chr15 84922645 84923091 + 0.451135909022758 NA promoter-TSS (NM_016714) promoter-TSS (NM_016714) -560 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-2 chr15 11523697 11524191 + 0.451135909022758 NA Intergenic Intergenic -124286 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-3 chr16 24491937 24492430 + 0.451135909022758 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -37131 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_38_39_-0.315554318204794_5.16415093578497_0.451135909022758-7 chr6 114874431 114874981 + 0.451135909022758 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 47115 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_46_32_0.229267183943601_5.15902771133025_0.451135909022752 chr11 95098962 95099272 + 0.451135909022752 NA Intergenic Intergenic -21000 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak2_46_32_0.229267183943601_5.15902771133025_0.451135909022752-5 chr8 69654524 69654883 + 0.451135909022752 NA intron (NM_001177527, intron 1 of 3) CpG 147 NM_001177527 636741 Mm.480188 NM_001177527 ENSMUSG00000091764 Zfp964 4732490P12|EG636741|Gm7187 zinc finger protein 964 protein-coding common_peak2_46_32_0.229267183943601_5.15902771133025_0.451135909022752-3 chr4 117886508 117887301 + 0.451135909022752 NA intron (NM_033617, intron 1 of 7) CpG 425 NM_033617 114143 Mm.207052 NM_033617 ENSMUSG00000033379 Atp6v0b 2310024H13Rik|Atp6f|VMA16 ATPase, H+ transporting, lysosomal V0 subunit B protein-coding common_peak2_46_32_0.229267183943601_5.15902771133025_0.451135909022752-6 chr9 49921660 49922100 + 0.451135909022752 NA Intergenic Intergenic -122487 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_46_32_0.229267183943601_5.15902771133025_0.451135909022752-2 chr12 98747029 98747434 + 0.451135909022752 NA intron (NM_001008506, intron 1 of 14) CpG 263 NM_029334 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding common_peak1_46_32_0.229267183943601_5.15902771133025_0.451135909022752-2 chr2 69401568 69402214 + 0.451135909022752 NA 3' UTR (NM_175512, exon 5 of 5) 3' UTR (NM_175512, exon 5 of 5) 21429 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak2_46_32_0.229267183943601_5.15902771133025_0.451135909022752-4 chr8 54565499 54566073 + 0.451135909022752 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 15455 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_46_32_0.229267183943601_5.15902771133025_0.451135909022752-3 chr8 119837895 119838532 + 0.451135909022752 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 2366 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_46_32_0.229267183943601_5.15902771133025_0.451135909022752 chr19 59457685 59458066 + 0.451135909022752 NA promoter-TSS (NM_010132) promoter-TSS (NM_010132) 760 NR_002863 329078 Mm.80382 NR_002863 ENSMUSG00000087095 Emx2os - Emx2 opposite strand/antisense transcript (non-protein coding) ncRNA common_peak1_164_149_-0.15620576649073_7.15071580725052_0.450952931130511 chr12 85373607 85374935 + 0.450952931130511 NA intron (NM_026775, intron 1 of 4) CpG 446 NM_026775 68581 Mm.379159 NM_026775 ENSMUSG00000021248 Tmed10 1110014C03Rik|Tmp21|p23|p24delta1 transmembrane p24 trafficking protein 10 protein-coding common_peak1_157_116_0.140147967118628_6.94043870314272_0.450887642954521 chr3 138527230 138528332 + 0.450887642954521 NA intron (NM_007917, intron 2 of 7) CpG 513 NM_001313980 13684 Mm.3941 NM_007917 ENSMUSG00000028156 Eif4e EG668879|Eif4e-ps|If4e|eIF-4E eukaryotic translation initiation factor 4E protein-coding common_peak2_299_226_0.102476017942361_7.87778649626209_0.450759601910631 chr11 77785057 77786993 + 0.450759601910631 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) 8790 NM_001291212 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_135_99_0.151864708415239_6.71978854398234_0.450012101453455-2 chr19 32304098 32305162 + 0.450012101453455 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 44686 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_135_99_0.151864708415239_6.71978854398234_0.450012101453455 chr15 5116686 5117434 + 0.450012101453455 NA intron (NM_026069, intron 1 of 3) CpG 447 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding common_peak1_135_99_0.151864708415239_6.71978854398234_0.450012101453455 chr13 55321449 55322847 + 0.450012101453455 NA promoter-TSS (NM_025596) promoter-TSS (NM_025596) 93 NM_025596 66494 Mm.439805 NM_025596 ENSMUSG00000021486 Prelid1 2610524G07Rik|Preli PRELI domain containing 1 protein-coding common_peak1_183_136_0.13071125968924_7.16338771280515_0.449903677358099 chr19 18630015 18631667 + 0.449903677358099 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 972 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_94_68_0.173240916947612_6.19514491525197_0.449877491958983 chr17 84958039 84958975 + 0.449877491958983 NA promoter-TSS (NR_027930) promoter-TSS (NR_027930) 506 NM_001159496 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_94_68_0.173240916947612_6.19514491525197_0.449877491958983-2 chr3 38282976 38283753 + 0.449877491958983 NA Intergenic Intergenic -75245 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak1_239_179_0.117514510149721_7.55061035140454_0.449710912105163 chr19 55710816 55712802 + 0.449710912105163 NA Intergenic Intergenic -9605 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_142_130_-0.165804448276317_6.95052077739929_0.449673093719602 chr1 134414851 134416697 + 0.449673093719602 NA 5' UTR (NM_001306069, exon 1 of 8) 5' UTR (NM_001306069, exon 1 of 8) 110 NM_001306069 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak2_192_172_-0.137475857166533_7.36589029905346_0.449586439920223 chr10 80073129 80075460 + 0.449586439920223 NA intron (NM_001359635, intron 4 of 31) intron (NM_001359635, intron 4 of 31) 1145 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_101_94_-0.186244128340286_6.4767335441608_0.44957098773469 chr13 51644867 51646217 + 0.44957098773469 NA intron (NM_025415, intron 1 of 2) CpG 310 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding common_peak2_101_94_-0.186244128340286_6.4767335441608_0.44957098773469 chr15 79229099 79230127 + 0.44957098773469 NA intron (NM_001045558, intron 1 of 12) CpG 231 NM_001045558 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak1_101_94_-0.186244128340286_6.4767335441608_0.44957098773469-2 chr9 44920339 44921217 + 0.44957098773469 NA promoter-TSS (NM_013795) promoter-TSS (NM_013795) -36 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak1_248_220_-0.125798315846303_7.72500340146828_0.449428239152702 chr15 31600734 31602300 + 0.449428239152702 NA promoter-TSS (NM_026546) promoter-TSS (NM_026546) 22 NM_001348035 12465 Mm.282158 NM_007637 ENSMUSG00000022234 Cct5 CCT-epsilon|Ccte|TCP-1-epsilon|TCPE|mKIAA0098 chaperonin containing Tcp1, subunit 5 (epsilon) protein-coding common_peak1_61_43_0.211017920915484_5.56494057909504_0.449053920623498-3 chr6 87887932 87888554 + 0.449053920623498 NA intron (NM_201244, intron 1 of 4) intron (NM_201244, intron 1 of 4) 271 NM_201244 54161 Mm.258785 NM_017477 ENSMUSG00000030058 Copg1 AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e coatomer protein complex, subunit gamma 1 protein-coding common_peak2_61_43_0.211017920915484_5.56494057909504_0.449053920623498-3 chr4 140961350 140961827 + 0.449053920623498 NA intron (NM_001355515, intron 1 of 7) CpG 317 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding common_peak1_61_43_0.211017920915484_5.56494057909504_0.449053920623498 chr11 54059413 54060188 + 0.449053920623498 NA intron (NM_019417, intron 3 of 6) intron (NM_019417, intron 3 of 6) 9217 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding common_peak1_61_43_0.211017920915484_5.56494057909504_0.449053920623498-2 chr14 12284210 12285081 + 0.449053920623498 NA intron (NM_001284384, intron 1 of 4) CpG 442 NM_001284386 218734 Mm.44068 NM_146051 ENSMUSG00000033111 3830406C13Rik - RIKEN cDNA 3830406C13 gene protein-coding common_peak2_61_43_0.211017920915484_5.56494057909504_0.449053920623498-2 chr4 138325705 138326198 + 0.449053920623498 NA exon (NM_026880, exon 1 of 8) exon (NM_026880, exon 1 of 8) 345 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak2_61_43_0.211017920915484_5.56494057909504_0.449053920623498 chr19 4208113 4208572 + 0.449053920623498 NA Intergenic ID4|SINE|ID -5896 NR_132308 105948585 Mm.32518 NR_132308 Gm45928 Clcf1-pold4 predicted gene, 45928 ncRNA common_peak1_61_43_0.211017920915484_5.56494057909504_0.449053920623498-4 chr9 102760501 102761323 + 0.449053920623498 NA Intergenic Intergenic 21264 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_51_51_-0.281956523259223_5.55946145651148_0.449053920623485 chr11 120823467 120824013 + 0.449053920623485 NA intron (NM_007988, intron 1 of 42) CpG 807 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak2_51_51_-0.281956523259223_5.55946145651148_0.449053920623485-2 chr15 88862201 88862927 + 0.449053920623485 NA 5' UTR (NM_145478, exon 1 of 6) 5' UTR (NM_145478, exon 1 of 6) 370 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak2_51_51_-0.281956523259223_5.55946145651148_0.449053920623485-5 chr8 106519133 106519666 + 0.449053920623485 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 8547 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak2_51_51_-0.281956523259223_5.55946145651148_0.449053920623485-4 chr5 130171892 130172424 + 0.449053920623485 NA intron (NM_001359233, intron 1 of 7) CpG 339 NM_001359233 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_51_51_-0.281956523259223_5.55946145651148_0.449053920623485-3 chr2 118479154 118479656 + 0.449053920623485 NA exon (NM_009273, exon 2 of 5) exon (NM_009273, exon 2 of 5) 291 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak2_51_51_-0.281956523259223_5.55946145651148_0.449053920623485-6 chr8 109957523 109958394 + 0.449053920623485 NA intron (NM_028584, intron 2 of 2) intron (NM_028584, intron 2 of 2) 4247 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak1_51_51_-0.281956523259223_5.55946145651148_0.449053920623485-2 chr3 65928536 65929247 + 0.449053920623485 NA Intergenic Intergenic 29358 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_51_51_-0.281956523259223_5.55946145651148_0.449053920623485 chr16 42874401 42875109 + 0.449053920623485 NA intron (NR_040522, intron 1 of 1) intron (NR_040522, intron 1 of 1) 832 NR_040521 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768-4 chr2 117540240 117541384 + 0.448977331118768 NA Intergenic Intergenic -197935 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak2_66_64_-0.240814795388067_5.90196041533442_0.448977331118768-3 chr7 112200444 112201454 + 0.448977331118768 NA Intergenic Intergenic -24887 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768-3 chr16 30066102 30067054 + 0.448977331118768 NA intron (NM_008235, intron 3 of 3) CpG 1221 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding common_peak2_77_55_0.19196387505172_5.90333685958346_0.448977331118768 chr17 47923653 47924650 + 0.448977331118768 NA intron (NM_028767, intron 1 of 16) CpG 481 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768-5 chr8 11393511 11394074 + 0.448977331118768 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -80966 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_66_64_-0.240814795388067_5.90196041533442_0.448977331118768-2 chr16 23272376 23273534 + 0.448977331118768 NA intron (NM_001252505, intron 2 of 7) intron (NM_001252505, intron 2 of 7) -17515 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768-7 chr8 70700885 70701912 + 0.448977331118768 NA TTS (NM_010592) TTS (NM_010592) 3659 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768-2 chr15 37406475 37407308 + 0.448977331118768 NA intron (NM_001359845, intron 4 of 6) intron (NM_001359845, intron 4 of 6) -18663 NM_029113 74892 Mm.107630 NM_029113 ENSMUSG00000022288 4930447A16Rik - RIKEN cDNA 4930447A16 gene protein-coding common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768-6 chr8 44936823 44937628 + 0.448977331118768 NA Intergenic Intergenic -12983 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_77_55_0.19196387505172_5.90333685958346_0.448977331118768 chr11 54062306 54062962 + 0.448977331118768 NA intron (NM_019417, intron 2 of 6) intron (NM_019417, intron 2 of 6) 6383 NM_019417 30794 Mm.21830 NM_019417 ENSMUSG00000020388 Pdlim4 Ril PDZ and LIM domain 4 protein-coding common_peak2_66_64_-0.240814795388067_5.90196041533442_0.448977331118768 chr12 80222728 80223945 + 0.448977331118768 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 37035 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_220_196_-0.130832791029095_7.55663542394183_0.448919576984802 chr4 46451050 46453213 + 0.448919576984802 NA intron (NM_130889, intron 1 of 6) CpG 1205 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding common_peak1_121_112_-0.180077872685556_6.73014002607241_0.448605098593023 chr8 123212142 123212702 + 0.448605098593023 NA promoter-TSS (NM_177279) promoter-TSS (NM_177279) 366 NM_145606 234852 Mm.41596 NM_145606 ENSMUSG00000000743 Chmp1a 2900018H07Rik|Pcoln3 charged multivesicular body protein 1A protein-coding common_peak1_160_118_0.142639608489196_6.96613756755254_0.448478082184892 chr7 133708298 133709930 + 0.448478082184892 NA promoter-TSS (NM_025392) promoter-TSS (NM_025392) 181 NM_009479 22276 Mm.3160 NM_009479 ENSMUSG00000030979 Uros AI415298|UROIIIS|Uros3 uroporphyrinogen III synthase protein-coding common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-6 chr8 95149202 95149476 + 0.448200956659578 NA Intergenic Intergenic -6799 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-4 chr16 31080984 31081418 + 0.448200956659578 NA exon (NM_198626, exon 1 of 4) exon (NM_198626, exon 1 of 4) 231 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-11 chr9 120010654 120011121 + 0.448200956659578 NA Intergenic RSINE1|SINE|B4 12711 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-2 chr13 112443496 112443805 + 0.448200956659578 NA Intergenic Intergenic -20420 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-5 chr8 33653651 33653885 + 0.448200956659578 NA exon (NM_010344, exon 1 of 13) exon (NM_010344, exon 1 of 13) 530 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-5 chr17 3350222 3350602 + 0.448200956659578 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) 23839 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-2 chr19 28554274 28554746 + 0.448200956659578 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -123714 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-4 chr4 141277104 141277427 + 0.448200956659578 NA Intergenic Intergenic -1174 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578 chr18 21299639 21300032 + 0.448200956659578 NA 5' UTR (NM_001033445, exon 1 of 6) 5' UTR (NM_001033445, exon 1 of 6) 304 NM_001033445 381126 Mm.312276 NM_001033445 ENSMUSG00000042680 Garem1 C86169|Fam59a|Garem|Gm944|mKIAA4238 GRB2 associated regulator of MAPK1 subtype 1 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-2 chr10 17102256 17102509 + 0.448200956659578 NA Intergenic Intergenic -6600 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-3 chr15 76190449 76190721 + 0.448200956659578 NA exon (NM_201391, exon 11 of 32) exon (NM_201391, exon 11 of 32) 5125 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-5 chr5 3595741 3596035 + 0.448200956659578 NA promoter-TSS (NM_027777) promoter-TSS (NM_027777) -178 NM_027777 71382 Mm.379196 NM_027777 ENSMUSG00000005907 Pex1 5430414H02Rik|E330005K07Rik|ZWS1 peroxisomal biogenesis factor 1 protein-coding common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-7 chr8 111597720 111598063 + 0.448200956659578 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 32431 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-9 chr5 135023641 135023897 + 0.448200956659578 NA intron (NM_001359179, intron 1 of 8) CpG 287 NR_133683 20907 Mm.6225 NM_016801 ENSMUSG00000007207 Stx1a HPC-1 syntaxin 1A (brain) protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-8 chr3 38254442 38254682 + 0.448200956659578 NA Intergenic Intergenic -46443 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA unique_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578 chr5 142793774 142794227 + 0.448200956659578 NA intron (NM_178242, intron 2 of 15) (CAAA)n|Simple_repeat|Simple_repeat 23387 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-6 chr5 31578898 31579331 + 0.448200956659578 NA Intergenic Intergenic -7717 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_18_21_-0.483213184518906_4.21782502637784_0.448200956659578 chr10 17102261 17102509 + 0.448200956659578 NA Intergenic Intergenic -6603 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-7 chr5 63917519 63917965 + 0.448200956659578 NA intron (NM_145923, intron 6 of 6) intron (NM_145923, intron 6 of 6) 51155 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578 chr1 193386979 193387273 + 0.448200956659578 NA Intergenic Intergenic -16844 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-3 chr19 32241509 32242110 + 0.448200956659578 NA intron (NM_144792, intron 4 of 9) intron (NM_144792, intron 4 of 9) -30796 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-6 chr2 112265722 112266022 + 0.448200956659578 NA promoter-TSS (NM_133649) promoter-TSS (NM_133649) -442 NM_133649 107723 Mm.491155 NM_133648 ENSMUSG00000027130 Slc12a6 9530023I19Rik|KCC3|gaxp solute carrier family 12, member 6 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-10 chr6 34596286 34596650 + 0.448200956659578 NA Intergenic Intergenic -2036 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-8 chr8 105635804 105636144 + 0.448200956659578 NA promoter-TSS (NM_181322) promoter-TSS (NM_181322) -564 NM_181322 13018 Mm.269474 NM_181322 ENSMUSG00000005698 Ctcf AW108038 CCCTC-binding factor protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-4 chr4 48578150 48578521 + 0.448200956659578 NA Intergenic CT-rich|Low_complexity|Low_complexity -6839 NM_001356272 230157 Mm.422686 NM_021436 ENSMUSG00000028347 Tmeff1 A830033E11|M7365|TR-1|Tr1 transmembrane protein with EGF-like and two follistatin-like domains 1 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-11 chr7 100608573 100608893 + 0.448200956659578 NA promoter-TSS (NR_003559) promoter-TSS (NR_003559) -432 NR_003559 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-3 chr10 29144552 29144983 + 0.448200956659578 NA intron (NM_026138, intron 1 of 6) intron (NM_026138, intron 1 of 6) 771 NM_026138 67412 Mm.390264 NM_026138 ENSMUSG00000038916 Soga3 6330407J23Rik SOGA family member 3 protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-10 chr9 9235930 9236506 + 0.448200956659578 NA promoter-TSS (NR_045754) promoter-TSS (NR_045754) -70 NR_045754 100579151 Mm.412450 NR_045754 ENSMUSG00000085253 Gm16833 - predicted gene, 16833 ncRNA common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-12 chr9 120776234 120776494 + 0.448200956659578 NA Intergenic Intergenic 138886 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-7 chr2 150362359 150362693 + 0.448200956659578 NA intron (NM_027017, intron 1 of 3) intron (NM_027017, intron 1 of 3) 239 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding unique_peak2_18_21_-0.483213184518906_4.21782502637784_0.448200956659578-9 chr8 128219204 128219514 + 0.448200956659578 NA Intergenic Intergenic 58866 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-16 chr9 106203208 106203529 + 0.448200956659575 NA intron (NM_011876, intron 1 of 8) intron (NM_011876, intron 1 of 8) 260 NM_011876 23999 Mm.274346 NM_011876 ENSMUSG00000023277 Twf2 A6-related|AU014993|Ptk9l|Ptk9r twinfilin actin binding protein 2 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-17 chr9 106370216 106370421 + 0.448200956659575 NA intron (NM_153459, intron 1 of 2) intron (NM_153459, intron 1 of 2) 1686 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-5 chr15 86188254 86188661 + 0.448200956659575 NA Intergenic Intergenic -2316 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-8 chrX 101532895 101533306 + 0.448200956659575 NA intron (NM_001290729, intron 1 of 38) intron (NM_001290729, intron 1 of 38) 365 NM_001290729 270627 Mm.261750 NM_001081008 ENSMUSG00000031314 Taf1 AU015687|B430306D02Rik|Ccg-1|Ccg1|KAT4|N-TAF1|TAFII250|Taf2a|p250 TATA-box binding protein associated factor 1 protein-coding unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575 chr10 121376895 121377456 + 0.448200956659575 NA intron (NM_029364, intron 5 of 13) intron (NM_029364, intron 5 of 13) 12085 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-6 chr2 180582810 180583061 + 0.448200956659575 NA exon (NM_028479, exon 2 of 6) exon (NM_028479, exon 2 of 6) 1713 NR_151482 73247 Mm.426558 NM_028479 ENSMUSG00000027569 Mrgbp 1600027N09Rik|AW060503|C80444 MRG/MORF4L binding protein protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-8 chr2 31470585 31470818 + 0.448200956659575 NA intron (NR_002687, intron 1 of 15) intron (NR_002687, intron 1 of 15) 393 NR_002687 432466 Mm.333323 NR_002687 ENSMUSG00000046687 Gm5424 EG432466 argininosuccinate synthase pseudogene pseudo unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-5 chr4 114588810 114589329 + 0.448200956659575 NA intron (NM_001085549, intron 4 of 6) intron (NM_001085549, intron 4 of 6) 182345 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-6 chr14 52022914 52023170 + 0.448200956659575 NA Intergenic Intergenic -2309 NM_027248 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik|Znf219 zinc finger protein 219 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-18 chr7 90389577 90390052 + 0.448200956659575 NA intron (NM_001040088, intron 2 of 9) intron (NM_001040088, intron 2 of 9) 2833 NM_001040088 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-11 chr18 35770922 35771226 + 0.448200956659575 NA promoter-TSS (NM_019912) promoter-TSS (NM_019912) -485 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-5 chr14 31768170 31768497 + 0.448200956659575 NA intron (NM_001024604, intron 2 of 27) intron (NM_001024604, intron 2 of 27) 62082 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-13 chr4 135883568 135883908 + 0.448200956659575 NA Intergenic Intergenic -9892 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-11 chr3 9145279 9145605 + 0.448200956659575 NA Intergenic Intergenic 83478 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-6 chr6 34634026 34634373 + 0.448200956659575 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 35695 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-9 chr17 45686468 45686775 + 0.448200956659575 NA promoter-TSS (NM_198167) promoter-TSS (NM_198167) 272 NM_026732 68463 Mm.379158 NM_026732 ENSMUSG00000023939 Mrpl14 1110006I11Rik|AI846816|MRP-L32|Rpml32 mitochondrial ribosomal protein L14 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-18 chrX 96119970 96120281 + 0.448200956659575 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 24080 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-11 chr3 107849262 107849742 + 0.448200956659575 NA Intergenic Intergenic -27728 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-14 chr4 137487252 137487528 + 0.448200956659575 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 18587 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-4 chr10 111671609 111672006 + 0.448200956659575 NA Intergenic Intergenic -77534 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-5 chr16 95769354 95769666 + 0.448200956659575 NA Intergenic Intergenic 67103 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-12 chr6 28480630 28480862 + 0.448200956659575 NA intron (NM_019776, intron 1 of 23) intron (NM_019776, intron 1 of 23) 398 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-12 chr3 53060821 53061158 + 0.448200956659575 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 19442 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-19 chr8 60759702 60760059 + 0.448200956659575 NA Intergenic Intergenic 104323 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-6 chr18 71215561 71215891 + 0.448200956659575 NA Intergenic Intergenic 647434 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-8 chr7 128554310 128554567 + 0.448200956659575 NA Intergenic Intergenic 30855 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-4 chr19 12004412 12004649 + 0.448200956659575 NA Intergenic Intergenic 32210 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-7 chr15 59556025 59556314 + 0.448200956659575 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -92485 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-4 chr15 76207034 76207330 + 0.448200956659575 NA promoter-TSS (NM_001163540) promoter-TSS (NM_001163540) -861 NM_001163540 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-17 chr7 80861041 80861290 + 0.448200956659575 NA promoter-TSS (NM_009553) promoter-TSS (NM_009553) -943 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575 chr10 88727831 88728098 + 0.448200956659575 NA Intergenic Intergenic 3137 NM_001037166 237433 Mm.478763 NM_001037166 Gm4925 EG237433 predicted gene 4925 protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-9 chr2 117461585 117461882 + 0.448200956659575 NA Intergenic Intergenic -118856 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-11 chr3 37314419 37314697 + 0.448200956659575 NA intron (NM_001255992, intron 1 of 1) intron (NM_001255992, intron 1 of 1) 2004 NM_001008502 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575 chr10 68136230 68136470 + 0.448200956659575 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 142376 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-2 chr4 83307855 83308249 + 0.448200956659575 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 16137 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-13 chr6 82879583 82879795 + 0.448200956659575 NA intron (NR_040520, intron 3 of 3) intron (NR_040520, intron 3 of 3) 2164 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-14 chr3 121481305 121481650 + 0.448200956659575 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 50867 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-4 chr11 121259350 121259743 + 0.448200956659575 NA promoter-TSS (NM_001080932) promoter-TSS (NM_001080932) -441 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-7 chr8 120539418 120539855 + 0.448200956659575 NA TTS (NR_106159) TTS (NR_106159) 940 NR_106159 102466849 NR_106159 ENSMUSG00000098280 Mir7687 Gm27573|mmu-mir-7687 microRNA 7687 ncRNA common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-10 chr17 83862177 83862430 + 0.448200956659575 NA Intergenic Intergenic -7885 NR_155491 320021 Mm.379475 NR_155490 C430042M11Rik - RIKEN cDNA C430042M11 gene ncRNA unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-7 chr16 24733660 24734019 + 0.448200956659575 NA intron (NM_001145954, intron 2 of 7) intron (NM_001145954, intron 2 of 7) 11984 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-5 chr11 103684878 103685249 + 0.448200956659575 NA intron (NM_019650, intron 4 of 5) intron (NM_019650, intron 4 of 5) 12647 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-2 chr15 97768129 97768317 + 0.448200956659575 NA promoter-TSS (NM_144850) promoter-TSS (NM_144850) -557 NM_001357630 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-9 chr9 63969918 63970165 + 0.448200956659575 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 52018 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-7 chr19 3769067 3769325 + 0.448200956659575 NA intron (NM_001167889, intron 2 of 10) intron (NM_001167889, intron 2 of 10) 1775 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575 chr1 175692237 175692653 + 0.448200956659575 NA exon (NM_010098, exon 1 of 4) exon (NM_010098, exon 1 of 4) 187 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-6 chr15 76462468 76462825 + 0.448200956659575 NA intron (NM_013481, intron 3 of 15) intron (NM_013481, intron 3 of 15) 5208 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-15 chr4 141926313 141926621 + 0.448200956659575 NA intron (NM_177868, intron 18 of 31) intron (NM_177868, intron 18 of 31) -51547 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-12 chr3 107279155 107279450 + 0.448200956659575 NA intron (NM_026774, intron 1 of 3) CpG 444 NM_026774 68576 Mm.290035 NM_026774 ENSMUSG00000087260 Lamtor5 1110003H18Rik|Hbxip|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-8 chr16 10782531 10782847 + 0.448200956659575 NA Intergenic Intergenic 2847 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-10 chr2 152683595 152683803 + 0.448200956659575 NA 3' UTR (NM_001159553, exon 3 of 3) 3' UTR (NM_001159553, exon 3 of 3) -3449 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-3 chr11 8580229 8580542 + 0.448200956659575 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 84150 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-14 chr6 86900900 86901116 + 0.448200956659575 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 51491 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-20 chr9 24944245 24944542 + 0.448200956659575 NA Intergenic Intergenic -29815 NR_153861 102631612 Mm.410759 NR_153861 E130101E03Rik - RIKEN cDNA E130101E03 gene ncRNA common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-15 chr7 133124523 133124905 + 0.448200956659575 NA Intergenic CpG-13663 -1231 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-2 chr11 104548934 104549342 + 0.448200956659575 NA intron (NM_145436, intron 1 of 18) intron (NM_145436, intron 1 of 18) 1482 NM_001285990 217232 Mm.89845 NM_145436 ENSMUSG00000020687 Cdc27 AI452358|APC3|BC023187 cell division cycle 27 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-4 chr11 119943194 119943524 + 0.448200956659575 NA intron (NM_001037754, intron 1 of 13) CpG 267 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-3 chr10 82763497 82763799 + 0.448200956659575 NA intron (NM_010914, intron 1 of 7) CpG 493 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-2 chr10 68235061 68235319 + 0.448200956659575 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 43536 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-2 chr1 191906841 191907170 + 0.448200956659575 NA 5' UTR (NM_009579, exon 1 of 2) 5' UTR (NM_009579, exon 1 of 2) 224 NM_009579 22782 Mm.9024 NM_009579 ENSMUSG00000037434 Slc30a1 AI839647|C130040I11Rik|Znt1 solute carrier family 30 (zinc transporter), member 1 protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-10 chr3 95725450 95725974 + 0.448200956659575 NA Intergenic Intergenic 9261 NR_105981 102466787 NR_105981 ENSMUSG00000098737 Mir7014 Gm27837|mmu-mir-7014 microRNA 7014 ncRNA common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-10 chr9 89704708 89704978 + 0.448200956659575 NA exon (NM_025360, exon 1 of 3) exon (NM_025360, exon 1 of 3) 200 NM_025360 66111 Mm.27606 NM_025360 ENSMUSG00000032353 Tmed3 1200002G13Rik|AW546672|P24b transmembrane p24 trafficking protein 3 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575 chr1 131244782 131245012 + 0.448200956659575 NA exon (NM_001313731, exon 1 of 6) exon (NM_001313731, exon 1 of 6) 281 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-7 chr5 148966183 148966620 + 0.448200956659575 NA Intergenic Intergenic 16151 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA unique_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575 chr7 74377145 74377502 + 0.448200956659575 NA intron (NM_001038643, intron 2 of 10) intron (NM_001038643, intron 2 of 10) 177457 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-21 chr9 26999158 26999438 + 0.448200956659575 NA promoter-TSS (NM_144543) promoter-TSS (NM_144543) 251 NM_025862 66948 Mm.289244 NM_025862 ENSMUSG00000031969 Acad8 2310016C19Rik|AI786953 acyl-Coenzyme A dehydrogenase family, member 8 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-9 chr2 131911632 131912027 + 0.448200956659575 NA intron (NM_001278256, intron 1 of 3) intron (NM_001278256, intron 1 of 3) 1901 NM_001278256 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-2 chr10 80038543 80038959 + 0.448200956659575 NA intron (NM_025554, intron 1 of 6) intron (NM_025554, intron 1 of 6) 908 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-16 chr9 24944237 24944533 + 0.448200956659575 NA Intergenic Intergenic -29823 NR_153861 102631612 Mm.410759 NR_153861 E130101E03Rik - RIKEN cDNA E130101E03 gene ncRNA unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-12 chr4 150808910 150809445 + 0.448200956659575 NA Intergenic GA-rich|Low_complexity|Low_complexity -44619 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-3 chr18 74921919 74922456 + 0.448200956659575 NA Intergenic Intergenic 39076 NM_010720 16891 Mm.299647 NM_010720 ENSMUSG00000053846 Lipg 3110013K01Rik|EL|lipase|mEDL lipase, endothelial protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-3 chr12 80435402 80435730 + 0.448200956659575 NA intron (NM_177267, intron 1 of 8) CpG 1035 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-16 chr7 16412081 16412769 + 0.448200956659575 NA intron (NM_198631, intron 1 of 13) ID_B1|SINE|B4 11229 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-9 chr3 7502871 7503232 + 0.448200956659575 NA promoter-TSS (NM_173181) promoter-TSS (NM_173181) -375 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-7 chr15 77894817 77895076 + 0.448200956659575 NA Intergenic Intergenic 34048 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-6 chr14 69665891 69666164 + 0.448200956659575 NA intron (NM_033325, intron 5 of 13) intron (NM_033325, intron 5 of 13) -26221 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-3 chr11 8533826 8534047 + 0.448200956659575 NA intron (NM_001083587, intron 10 of 30) intron (NM_001083587, intron 10 of 30) 130599 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-11 chr9 110680011 110680520 + 0.448200956659575 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 23762 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-8 chr15 101374914 101375155 + 0.448200956659575 NA Intergenic Intergenic -4909 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_24_16_0.281891000475213_4.22840834148795_0.448200956659575-4 chr11 99454460 99454804 + 0.448200956659575 NA Intergenic Intergenic -16479 NM_023256 66809 Mm.28042 NM_023256 ENSMUSG00000035775 Krt20 9030623C06Rik|Ck-20|Ck20|K20|Krt21 keratin 20 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-10 chr3 21955199 21955573 + 0.448200956659575 NA Intergenic Intergenic -121266 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-8 chr18 32148053 32148414 + 0.448200956659575 NA Intergenic ID_B1|SINE|B4 -8663 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-3 chr11 88594597 88595014 + 0.448200956659575 NA intron (NM_054043, intron 5 of 13) (TCTCTG)n|Simple_repeat|Simple_repeat -24446 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-12 chr9 110881743 110882195 + 0.448200956659575 NA intron (NM_001146060, intron 1 of 26) intron (NM_001146060, intron 1 of 26) 1647 NM_001146060 235633 Mm.86338 NM_146228 ENSMUSG00000044037 Als2cl 79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018 ALS2 C-terminal like protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575 chr1 21078128 21078446 + 0.448200956659575 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 938 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-15 chr9 58506989 58507249 + 0.448200956659575 NA Intergenic Intergenic 18516 NM_176921 319477 Mm.153674 NM_176921 ENSMUSG00000066607 6030419C18Rik - RIKEN cDNA 6030419C18 gene protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575 chr1 193449226 193449567 + 0.448200956659575 NA Intergenic Intergenic 58134 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-13 chr9 107324714 107325008 + 0.448200956659575 NA Intergenic Intergenic 13489 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding unique_peak1_25_16_0.338075333204774_4.25650050785273_0.448200956659575-5 chr11 88399531 88400037 + 0.448200956659575 NA intron (NM_054043, intron 8 of 13) intron (NM_054043, intron 8 of 13) 47011 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA common_peak2_25_16_0.338075333204774_4.25650050785273_0.448200956659575-2 chr10 4273404 4273708 + 0.448200956659575 NA intron (NM_031185, intron 1 of 3) B1_Mus2|SINE|Alu 7227 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak1_24_16_0.281891000475213_4.22840834148795_0.448200956659575-13 chr3 65929748 65929971 + 0.448200956659575 NA Intergenic Intergenic 28390 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_633_486_0.0731508888493728_8.96435340650703_0.448132344620451 chr8 126586676 126592068 + 0.448132344620451 NA 3' UTR (NM_001164598, exon 2 of 2) 3' UTR (NM_001164598, exon 2 of 2) 4064 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_115_84_0.15846710566632_6.48862448897086_0.447909205754324 chr3 90293322 90294336 + 0.447909205754324 NA Intergenic CpG 23680 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak1_102_95_-0.187375135662929_6.49127493288969_0.447909205754324 chr13 98316221 98317258 + 0.447909205754324 NA promoter-TSS (NR_137279) promoter-TSS (NR_137279) 228 NM_145455 218490 Mm.371688 NM_145455 ENSMUSG00000021660 Btf3 1700054E11Rik basic transcription factor 3 protein-coding common_peak2_115_84_0.15846710566632_6.48862448897086_0.447909205754324-2 chr7 3629245 3630443 + 0.447909205754324 NA promoter-TSS (NM_027328) promoter-TSS (NM_027328) 85 NM_023524 69714 Mm.358730 NM_023524 ENSMUSG00000006335 Tfpt 2400004F01Rik|AI450389|Amida|FB1 TCF3 (E2A) fusion partner protein-coding common_peak2_102_95_-0.187375135662929_6.49127493288969_0.447909205754324 chr7 106236956 106238014 + 0.447909205754324 NA Intergenic Intergenic -22145 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak2_96_69_0.182327537466112_6.22044678567802_0.447862948295038 chr14 75845393 75846196 + 0.447862948295038 NA promoter-TSS (NR_045294) promoter-TSS (NR_045294) 538 NM_009429 22070 Mm.297482 NM_009429 ENSMUSG00000060126 Tpt1 TCTP|Trt|p21|p23 tumor protein, translationally-controlled 1 protein-coding common_peak1_95_69_0.167482670353796_6.21302435212186_0.447862948295038 chr10 63243904 63244762 + 0.447862948295038 NA intron (NM_001359484, intron 1 of 22) CpG 536 NM_001359484 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak1_95_69_0.167482670353796_6.21302435212186_0.447862948295038-2 chr9 106159574 106160640 + 0.447862948295038 NA Intergenic CpG -1969 NM_174846 235582 Mm.335420 NM_174846 ENSMUSG00000020258 Glyctk 6230410P16Rik|C430006L12 glycerate kinase protein-coding common_peak1_96_69_0.182327537466112_6.22044678567802_0.447862948295038 chr10 27986999 27988142 + 0.447862948295038 NA Intergenic Intergenic -87250 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_340_258_0.0957216306722479_8.06466910302268_0.447584463902292 chr5 23433044 23435587 + 0.447584463902292 NA promoter-TSS (NM_026984) promoter-TSS (NM_026984) 38 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_223_198_-0.126090465471457_7.57357938780792_0.447361918655564 chr8 44934351 44936305 + 0.447361918655564 NA Intergenic CpG -14880 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_161_119_0.139436877945851_6.97660903458144_0.447302140466011 chr8 126602668 126604196 + 0.447302140466011 NA Intergenic Intergenic -9996 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_122_113_-0.181094844336848_6.74234259199632_0.447224436702445 chr17 3114350 3115607 + 0.447224436702445 NA promoter-TSS (NM_134123) promoter-TSS (NM_134123) 6 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak1_123_113_-0.169495454185204_6.74814228707214_0.447224436702445 chr12 52503940 52505034 + 0.447224436702445 NA Intergenic CpG -11590 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak2_499_382_0.0795902402614974_8.6209957020557_0.447011250846942 chr3 90612342 90615544 + 0.447011250846942 NA intron (NM_011313, intron 2 of 2) intron (NM_011313, intron 2 of 2) 1049 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_48_33_0.245895302115716_5.2104104923082_0.447010559430123-5 chr7 111976968 111977552 + 0.447010559430123 NA Intergenic Intergenic -46246 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-5 chr17 46556434 46556963 + 0.447010559430123 NA promoter-TSS (NM_020493) promoter-TSS (NM_020493) -536 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding common_peak2_48_33_0.245895302115716_5.2104104923082_0.447010559430123-3 chr6 30352271 30352744 + 0.447010559430123 NA Intergenic Intergenic 38513 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-6 chr7 80025266 80026043 + 0.447010559430123 NA promoter-TSS (NM_175433) promoter-TSS (NM_175433) -574 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123 chr13 55593170 55593746 + 0.447010559430123 NA intron (NM_026211, intron 1 of 4) CpG 323 NM_026211 67511 Mm.45233 NM_026211 ENSMUSG00000058569 Tmed9 2400003B06Rik transmembrane p24 trafficking protein 9 protein-coding common_peak1_48_33_0.245895302115716_5.2104104923082_0.447010559430123 chr1 172126784 172127630 + 0.447010559430123 NA intron (NM_001159525, intron 1 of 5) PB1D7|SINE|Alu 452 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_47_33_0.216357825621666_5.19564175406117_0.447010559430123-3 chr4 83305576 83305964 + 0.447010559430123 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 18419 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-6 chr18 36560657 36561286 + 0.447010559430123 NA exon (NM_175375, exon 1 of 34) exon (NM_175375, exon 1 of 34) 368 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak2_48_33_0.245895302115716_5.2104104923082_0.447010559430123-2 chr13 49706986 49707814 + 0.447010559430123 NA intron (NM_172015, intron 14 of 33) intron (NM_172015, intron 14 of 33) 25270 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-7 chr18 61107553 61108165 + 0.447010559430123 NA intron (NM_001037859, intron 2 of 21) intron (NM_001037859, intron 2 of 21) 2287 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123-7 chr9 44360955 44361592 + 0.447010559430123 NA intron (NM_027889, intron 1 of 15) MIRc|SINE|MIR 397 NM_001357393 71732 Mm.295013 NM_027889 ENSMUSG00000032127 Vps11 1200011A11Rik VPS11, CORVET/HOPS core subunit protein-coding common_peak2_47_33_0.216357825621666_5.19564175406117_0.447010559430123 chr11 75563803 75564263 + 0.447010559430123 NA intron (NM_001199284, intron 9 of 13) intron (NM_001199284, intron 9 of 13) 12604 NR_039553 100628624 NR_039553 ENSMUSG00000093100 Mir3971 mmu-mir-3971|mu-mir-3971 microRNA 3971 ncRNA common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123-4 chr17 65885137 65885650 + 0.447010559430123 NA promoter-TSS (NM_001198949) promoter-TSS (NM_001198949) 362 NM_009067 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-3 chr11 86625321 86625940 + 0.447010559430123 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -41472 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-3 chr15 77916799 77917240 + 0.447010559430123 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 11975 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-4 chr17 34960235 34960504 + 0.447010559430123 NA Intergenic Intergenic -1131 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding common_peak1_48_33_0.245895302115716_5.2104104923082_0.447010559430123-3 chr17 31981983 31982529 + 0.447010559430123 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 52252 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding common_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-2 chr15 74702435 74702860 + 0.447010559430123 NA 3' UTR (NM_008415, exon 2 of 2) 3' UTR (NM_008415, exon 2 of 2) -6514 NR_033197 66769 Mm.482908 NM_025756 ENSMUSG00000044276 4933427E11Rik - RIKEN cDNA 4933427E11 gene ncRNA common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-4 chr12 83950541 83951100 + 0.447010559430123 NA exon (NM_023633, exon 1 of 1) exon (NM_023633, exon 1 of 1) 212 NM_023633 71952 Mm.251483 NM_023633 ENSMUSG00000046791 Riox1 2410016O06Rik|MAPJD|NO66 ribosomal oxygenase 1 protein-coding unique_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-2 chr5 53104049 53104712 + 0.447010559430123 NA Intergenic Intergenic 55027 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding unique_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123 chr19 44388380 44389092 + 0.447010559430123 NA Intergenic Intergenic 18973 NM_009127 20249 Mm.267377 NM_009127 ENSMUSG00000037071 Scd1 AA589638|AI265570|Scd|Scd-1|ab stearoyl-Coenzyme A desaturase 1 protein-coding common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123-5 chr3 123053902 123054255 + 0.447010559430123 NA Intergenic Intergenic -19091 NM_001355462 59006 Mm.141157 NM_021503 ENSMUSG00000028116 Myoz2 1110012I24Rik|Fatz-2|Myozl2 myozenin 2 protein-coding common_peak2_47_33_0.216357825621666_5.19564175406117_0.447010559430123-2 chr16 5233630 5234020 + 0.447010559430123 NA exon (NM_145362, exon 1 of 13) exon (NM_145362, exon 1 of 13) 204 NM_145362 208211 Mm.34581 NM_145362 ENSMUSG00000039427 Alg1 HMAT1|HMT1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein-coding common_peak1_48_33_0.245895302115716_5.2104104923082_0.447010559430123-2 chr10 91187795 91188519 + 0.447010559430123 NA Intergenic Intergenic -16538 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_48_33_0.245895302115716_5.2104104923082_0.447010559430123-4 chr4 24495884 24496348 + 0.447010559430123 NA promoter-TSS (NM_199467) promoter-TSS (NM_199467) -335 NR_149739 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123-2 chr16 45889626 45890238 + 0.447010559430123 NA Intergenic Intergenic -45181 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123-6 chr4 19525482 19525965 + 0.447010559430123 NA intron (NM_027769, intron 14 of 15) intron (NM_027769, intron 14 of 15) 44385 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding common_peak2_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-5 chr5 34186899 34187687 + 0.447010559430123 NA intron (NM_010753, intron 2 of 5) CpG 417 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123-3 chr16 94568662 94569166 + 0.447010559430123 NA Intergenic Intergenic -1292 NM_007890 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123-2 chr1 182519744 182520072 + 0.447010559430123 NA Intergenic Intergenic -2298 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_47_33_0.216357825621666_5.19564175406117_0.447010559430123 chr15 53614438 53614759 + 0.447010559430123 NA promoter-TSS (NR_039538) promoter-TSS (NR_039538) -319 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_48_33_0.245895302115716_5.2104104923082_0.447010559430123 chr10 120721908 120722525 + 0.447010559430123 NA Intergenic Intergenic -43516 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_39_40_-0.314910041219654_5.20009698400826_0.447010559430123 chr1 179959393 179959794 + 0.447010559430123 NA Intergenic CpG -1167 NM_001359541 226751 Mm.259655 NM_001033285 ENSMUSG00000026490 Cdc42bpa A930014J19Rik|DMPK-like CDC42 binding protein kinase alpha protein-coding common_peak1_187_139_0.1302683272106_7.19441718055027_0.446842257020164 chr2 152820254 152821973 + 0.446842257020164 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 7376 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_244_183_0.115343126916433_7.58123351951523_0.446595333232244 chr2 32151261 32153092 + 0.446595333232244 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 1028 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_67_65_-0.241618241595246_5.92358499856083_0.446527356848066-3 chr6 142338680 142339673 + 0.446527356848066 NA Intergenic Intergenic -6521 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak1_78_56_0.184677652110535_5.92522884022001_0.446527356848066 chr18 82522696 82523485 + 0.446527356848066 NA intron (NM_001025245, intron 3 of 3) intron (NM_001025245, intron 3 of 3) -31373 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_67_65_-0.241618241595246_5.92358499856083_0.446527356848066-4 chr8 122282527 122283353 + 0.446527356848066 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 799 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_67_65_-0.241618241595246_5.92358499856083_0.446527356848066 chr3 32708693 32709430 + 0.446527356848066 NA intron (NM_019673, intron 1 of 13) CpG 515 NM_019673 56456 Mm.41077 NM_019673 ENSMUSG00000027671 Actl6a 2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802 actin-like 6A protein-coding common_peak2_78_56_0.184677652110535_5.92522884022001_0.446527356848066 chr19 4811821 4812409 + 0.446527356848066 NA promoter-TSS (NM_019869) promoter-TSS (NM_019869) -481 NM_019869 56275 Mm.276338 NM_019869 ENSMUSG00000006456 Rbm14 1300007E16Rik|PSP2|Sytip|p16|p16K RNA binding motif protein 14 protein-coding common_peak2_67_65_-0.241618241595246_5.92358499856083_0.446527356848066 chr12 78225901 78227127 + 0.446527356848066 NA promoter-TSS (NM_145965) promoter-TSS (NM_145965) -141 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak1_78_56_0.184677652110535_5.92522884022001_0.446527356848066-2 chr5 139014644 139015850 + 0.446527356848066 NA Intergenic Intergenic -20294 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_67_65_-0.241618241595246_5.92358499856083_0.446527356848066-2 chr6 49073587 49074247 + 0.446527356848066 NA exon (NM_029353, exon 1 of 4) exon (NM_029353, exon 1 of 4) 122 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding common_peak1_78_56_0.184677652110535_5.92522884022001_0.446527356848066-3 chr6 100707210 100708141 + 0.446527356848066 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 2941 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak2_78_56_0.184677652110535_5.92522884022001_0.446527356848066-2 chr5 122158317 122159085 + 0.446527356848066 NA intron (NM_013636, intron 1 of 6) CpG 422 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak1_319_279_-0.10780599226627_8.07538002081183_0.446496408643912 chr8 25601158 25603531 + 0.446496408643912 NA promoter-TSS (NM_001308482) promoter-TSS (NM_001308482) 60 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-38 chr5 142401152 142401394 + 0.446472590016315 NA promoter-TSS (NM_199068) promoter-TSS (NM_199068) -224 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-4 chr12 77956408 77956614 + 0.446472590016315 NA Intergenic Intergenic -270144 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315 chr1 40445027 40445228 + 0.446472590016315 NA intron (NM_001025602, intron 6 of 10) intron (NM_001025602, intron 6 of 10) 5498 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-10 chr5 137108563 137108809 + 0.446472590016315 NA Intergenic Intergenic 7521 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-4 chr1 106712635 106712888 + 0.446472590016315 NA exon (NM_177410, exon 1 of 1) exon (NM_177410, exon 1 of 1) 1529 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-19 chr5 146974889 146975178 + 0.446472590016315 NA Intergenic Intergenic -11178 NM_001359467 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-5 chr19 32197816 32198015 + 0.446472590016315 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 13098 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-14 chr13 41949495 41949848 + 0.446472590016315 NA Intergenic PB1D10|SINE|Alu 83756 NR_033545 100038577 Mm.387093 NR_033545 ENSMUSG00000113856 Gm10790 - predicted gene 10790 ncRNA common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-14 chr2 131686853 131687309 + 0.446472590016315 NA Intergenic Intergenic -124796 NM_013460 11550 Mm.389380 NM_013460 ENSMUSG00000027335 Adra1d Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR adrenergic receptor, alpha 1d protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-6 chr10 91199762 91199983 + 0.446472590016315 NA Intergenic Intergenic 20747 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-6 chr2 75703116 75703381 + 0.446472590016315 NA intron (NR_132727, intron 1 of 1) intron (NR_132727, intron 1 of 1) 1415 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-8 chr1 178791100 178791516 + 0.446472590016315 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 262183 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-11 chr15 13276237 13276528 + 0.446472590016315 NA Intergenic Intergenic -102707 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315 chr14 65878515 65878705 + 0.446472590016315 NA Intergenic Intergenic 41308 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-3 chr10 4274176 4274427 + 0.446472590016315 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 7972 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-24 chr8 126600438 126600892 + 0.446472590016315 NA Intergenic B1_Mus1|SINE|Alu -7229 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-6 chr16 18628602 18628813 + 0.446472590016315 NA intron (NM_213614, intron 2 of 11) intron (NM_213614, intron 2 of 11) 1231 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-16 chr9 62106931 62107179 + 0.446472590016315 NA Intergenic Intergenic 15539 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-7 chr6 89447288 89447532 + 0.446472590016315 NA intron (NM_001167736, intron 4 of 6) intron (NM_001167736, intron 4 of 6) -84797 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-5 chr11 106324970 106325238 + 0.446472590016315 NA intron (NM_133199, intron 18 of 23) intron (NM_133199, intron 18 of 23) -10542 NM_001313939 15985 Mm.2987 NM_008339 ENSMUSG00000040592 Cd79b B29|Ig-beta|Igb|Igbeta CD79B antigen protein-coding common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-6 chr3 70805862 70806145 + 0.446472590016315 NA intron (NR_040556, intron 1 of 3) intron (NR_040556, intron 1 of 3) 1288 NR_040556 625901 Mm.366028 NR_040556 ENSMUSG00000097252 Gm6634 EG625901 predicted gene 6634 ncRNA unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-25 chr9 70263668 70263986 + 0.446472590016315 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 56477 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-25 chr19 56983889 56984113 + 0.446472590016315 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 24574 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-10 chr11 69682173 69682371 + 0.446472590016315 NA promoter-TSS (NM_001163571) promoter-TSS (NM_001163571) -188 NM_001163571 80886 Mm.284592 NM_030702 ENSMUSG00000005204 Senp3 AA408656|Smt3ip|Smt3ip1 SUMO/sentrin specific peptidase 3 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-2 chr1 13372161 13372377 + 0.446472590016315 NA 5' UTR (NM_001302702, exon 1 of 22) 5' UTR (NM_001302702, exon 1 of 22) 160 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-9 chr11 32251274 32251703 + 0.446472590016315 NA intron (NM_001284359, intron 5 of 13) intron (NM_001284359, intron 5 of 13) 16219 NM_181569 17168 Mm.263161 NM_181569 ENSMUSG00000020289 Nprl3 Aag|CGTHBA|HS-26|HS-40|Mare|Phg|Prox1|m(alpha)RE nitrogen permease regulator-like 3 protein-coding common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-3 chr10 6848345 6848762 + 0.446472590016315 NA intron (NM_001302796, intron 3 of 4) intron (NM_001302796, intron 3 of 4) 59977 NM_001039652 18390 Mm.438000 NM_011013 ENSMUSG00000000766 Oprm1 M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR opioid receptor, mu 1 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-16 chr14 24199407 24199620 + 0.446472590016315 NA intron (NM_027726, intron 1 of 30) intron (NM_027726, intron 1 of 30) 46407 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-16 chr3 88497407 88497656 + 0.446472590016315 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) -4219 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-17 chr5 121205382 121205632 + 0.446472590016315 NA exon (NM_011290, exon 2 of 7) exon (NM_011290, exon 2 of 7) 1006 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315 chr1 55089028 55089267 + 0.446472590016315 NA promoter-TSS (NM_001356512) promoter-TSS (NM_001356512) -904 NM_001356512 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|CPN60|HSP-60|HSP-65|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-5 chr14 16483832 16484079 + 0.446472590016315 NA intron (NM_001289760, intron 5 of 9) intron (NM_001289760, intron 5 of 9) 91521 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-15 chr7 144945799 144946015 + 0.446472590016315 NA Intergenic Intergenic -5982 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-4 chr11 20957150 20957391 + 0.446472590016315 NA Intergenic Intergenic -126162 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-9 chr11 74555628 74555908 + 0.446472590016315 NA intron (NM_001015046, intron 2 of 24) B3|SINE|B2 34390 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-6 chr1 160280410 160280737 + 0.446472590016315 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) 15399 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-8 chr11 72111351 72111554 + 0.446472590016315 NA intron (NM_001024927, intron 3 of 19) intron (NM_001024927, intron 3 of 19) 24437 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-2 chr1 165194796 165195015 + 0.446472590016315 NA promoter-TSS (NM_145512) promoter-TSS (NM_145512) -467 NR_151712 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-11 chr19 5429105 5429327 + 0.446472590016315 NA Intergenic Intergenic 4072 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-28 chr2 102766440 102766758 + 0.446472590016315 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -19839 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-3 chr15 61239427 61239641 + 0.446472590016315 NA Intergenic Intergenic -318264 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-15 chr14 16817752 16818017 + 0.446472590016315 NA intron (NM_001289760, intron 2 of 9) intron (NM_001289760, intron 2 of 9) -242408 NM_001289762 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-10 chr16 50364499 50364708 + 0.446472590016315 NA intron (NM_027444, intron 2 of 16) intron (NM_027444, intron 2 of 16) 67786 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315 chr1 4785973 4786314 + 0.446472590016315 NA promoter-TSS (NR_033530) promoter-TSS (NR_033530) -417 NM_025300 27395 Mm.182927 NM_025300 ENSMUSG00000033845 Mrpl15 HSPC145|MRP-L7|Rpml7 mitochondrial ribosomal protein L15 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-23 chr18 75380819 75381056 + 0.446472590016315 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 13572 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-3 chr1 90224290 90224525 + 0.446472590016315 NA Intergenic Intergenic 20427 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding unique_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-2 chr12 50544606 50545036 + 0.446472590016315 NA intron (NM_008858, intron 1 of 18) MIR|SINE|MIR 104402 NM_008858 18760 Mm.133719 NM_008858 ENSMUSG00000002688 Prkd1 PKD|PKD1|Pkcm|Prkcm protein kinase D1 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-29 chrX 94725174 94725438 + 0.446472590016315 NA exon (NM_001081473, exon 1 of 1) exon (NM_001081473, exon 1 of 1) 737 NM_001081473 668166 Mm.426145 NM_001081473 ENSMUSG00000073062 Zxdb Zxda zinc finger, X-linked, duplicated B protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-27 chr9 77598968 77599228 + 0.446472590016315 NA Intergenic Intergenic -37634 NM_172925 244923 Mm.138238 NM_172925 ENSMUSG00000044938 Klhl31 9830147P19Rik|D930047P17Rik|Kbtbd1 kelch-like 31 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-18 chr14 66868835 66869093 + 0.446472590016315 NA promoter-TSS (NM_009955) promoter-TSS (NM_009955) 114 NM_001034881 432870 Mm.425890 NM_001034881 ENSMUSG00000075553 Gm5464 EG432870 predicted gene 5464 protein-coding common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-4 chr18 74981764 74982007 + 0.446472590016315 NA promoter-TSS (NR_110446) promoter-TSS (NR_110446) -338 NR_110446 71545 Mm.488094 NR_110446 9030625G05Rik - RIKEN cDNA 9030625G05 gene ncRNA unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-3 chr11 12036728 12036981 + 0.446472590016315 NA intron (NM_010345, intron 1 of 16) CpG 566 NM_010345 14783 Mm.273117 NM_010345 ENSMUSG00000020176 Grb10 5730571D09Rik|AI325020|Meg1|mKIAA0207 growth factor receptor bound protein 10 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-11 chr11 96344223 96344510 + 0.446472590016315 NA exon (NM_010458, exon 1 of 2) exon (NM_010458, exon 1 of 2) 597 NM_010458 15410 Mm.342481 NM_010458 ENSMUSG00000048763 Hoxb3 Hox-2.7 homeobox B3 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-36 chr5 125174596 125174819 + 0.446472590016315 NA intron (NM_001253905, intron 1 of 42) intron (NM_001253905, intron 1 of 42) 4507 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-20 chr6 5495967 5496197 + 0.446472590016315 NA exon (NM_013743, exon 1 of 11) exon (NM_013743, exon 1 of 11) 196 NM_013743 27273 Mm.235547 NM_013743 ENSMUSG00000019577 Pdk4 AV005916 pyruvate dehydrogenase kinase, isoenzyme 4 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-14 chr2 69513198 69513571 + 0.446472590016315 NA intron (NM_001081088, intron 18 of 78) intron (NM_001081088, intron 18 of 78) 72683 NM_001081088 14725 Mm.23847 NM_001081088 ENSMUSG00000027070 Lrp2 AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo low density lipoprotein receptor-related protein 2 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315 chr1 79469468 79469755 + 0.446472590016315 NA Intergenic Intergenic -29521 NM_001310680 20254 Mm.5038 NM_009129 ENSMUSG00000050711 Scg2 Chgc|SgII secretogranin II protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-5 chr10 77165442 77165713 + 0.446472590016315 NA intron (NM_009929, intron 2 of 41) CpG 953 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-19 chr7 116295438 116295682 + 0.446472590016315 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 12816 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-8 chr13 110400408 110400626 + 0.446472590016315 NA 3' UTR (NM_152804, exon 14 of 14) 3' UTR (NM_152804, exon 14 of 14) 5473 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315 chr10 58255632 58255904 + 0.446472590016315 NA intron (NM_027375, intron 1 of 22) intron (NM_027375, intron 1 of 22) 242 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-2 chr1 186610331 186610573 + 0.446472590016315 NA Intergenic Intergenic -51771 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-7 chr17 70756153 70756404 + 0.446472590016315 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 90499 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-10 chr13 13210890 13211139 + 0.446472590016315 NA Intergenic Intergenic 28298 NM_001311129 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-23 chr8 68197324 68197669 + 0.446472590016315 NA Intergenic Intergenic -79032 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-6 chr13 64382549 64382814 + 0.446472590016315 NA Intergenic Intergenic -12161 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-39 chr5 146707161 146707378 + 0.446472590016315 NA Intergenic Intergenic 87687 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-26 chr2 30458056 30458256 + 0.446472590016315 NA Intergenic Intergenic 16043 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-2 chr1 181232507 181232740 + 0.446472590016315 NA Intergenic Intergenic -20645 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-30 chr3 75687348 75687617 + 0.446472590016315 NA Intergenic Intergenic -31751 NR_040539 69193 Mm.374088 NR_040539 ENSMUSG00000099370 Platr10 2410007B07Rik pluripotency associated transcript 10 ncRNA unique_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-3 chr12 85603998 85604210 + 0.446472590016315 NA intron (NM_001205053, intron 1 of 3) intron (NM_001205053, intron 1 of 3) 4086 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-17 chr14 25480043 25480345 + 0.446472590016315 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 21009 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-41 chr8 25042599 25042890 + 0.446472590016315 NA exon (NM_031257, exon 12 of 12) exon (NM_031257, exon 12 of 12) -3782 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-13 chr2 38523032 38523384 + 0.446472590016315 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 11332 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-34 chr4 133116850 133117095 + 0.446472590016315 NA Intergenic Intergenic -13661 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-7 chr2 153444824 153445073 + 0.446472590016315 NA promoter-TSS (NM_001001986) promoter-TSS (NM_001001986) -469 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-28 chr9 98295451 98295667 + 0.446472590016315 NA Intergenic Intergenic -1011 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-2 chr15 79413878 79414081 + 0.446472590016315 NA Intergenic Intergenic -10676 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-35 chr5 30849867 30850175 + 0.446472590016315 NA intron (NM_133350, intron 1 of 6) intron (NM_133350, intron 1 of 6) -11786 NM_001310516 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-2 chr11 85310779 85311050 + 0.446472590016315 NA promoter-TSS (NM_016910) promoter-TSS (NM_016910) -340 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-37 chr5 131119532 131119921 + 0.446472590016315 NA intron (NM_145218, intron 2 of 10) intron (NM_145218, intron 2 of 10) 187796 NM_145218 212996 Mm.299204 NM_145218 ENSMUSG00000034040 Wbscr17 AA388321|E330012B09Rik|Galnt17 Williams-Beuren syndrome chromosome region 17 homolog (human) protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-5 chr1 156072215 156072465 + 0.446472590016315 NA Intergenic Intergenic 31479 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-2 chr15 11699696 11699951 + 0.446472590016315 NA Intergenic Intergenic 205851 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-21 chr18 9387409 9387666 + 0.446472590016315 NA intron (NM_026484, intron 1 of 9) intron (NM_026484, intron 1 of 9) 62617 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-9 chr4 149956375 149956758 + 0.446472590016315 NA Intergenic B2_Mm2|SINE|B2 -1560 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-12 chr2 24468574 24468899 + 0.446472590016315 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 6863 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-33 chr4 120488301 120488632 + 0.446472590016315 NA intron (NM_001355424, intron 7 of 14) intron (NM_001355424, intron 7 of 14) 35222 NM_001355423 29871 Mm.427014 NM_013883 ENSMUSG00000000085 Scmh1 AI315320|AI851618|Scml1|Scml3 sex comb on midleg homolog 1 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-15 chr3 122343880 122344180 + 0.446472590016315 NA Intergenic Intergenic -50327 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-13 chr11 109331652 109331895 + 0.446472590016315 NA Intergenic Intergenic -15094 NR_027883 67927 Mm.394490 NR_027883 ENSMUSG00000099630 1700096J18Rik - RIKEN cDNA 1700096J18 gene ncRNA unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-18 chr5 33658705 33659007 + 0.446472590016315 NA promoter-TSS (NM_001356983) promoter-TSS (NM_001356983) 728 NM_001040435 21335 Mm.379024 NM_011524 ENSMUSG00000037313 Tacc3 Aint|C86661|Eric1 transforming, acidic coiled-coil containing protein 3 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-7 chr10 120632519 120632731 + 0.446472590016315 NA Intergenic Intergenic -133107 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-21 chr6 146944724 146944955 + 0.446472590016315 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) 9582 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-29 chr3 65635757 65635986 + 0.446472590016315 NA Intergenic Intergenic -23417 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-13 chr7 24388517 24388736 + 0.446472590016315 NA Intergenic Intergenic -11002 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315-8 chrX 99470191 99470445 + 0.446472590016315 NA intron (NM_001290555, intron 1 of 1) intron (NM_001290555, intron 1 of 1) 417 NM_001083110 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger ubiquitin ligase 1 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-24 chr18 80655446 80655736 + 0.446472590016315 NA intron (NM_198429, intron 6 of 9) intron (NM_198429, intron 6 of 9) 52582 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-12 chr18 75389655 75389862 + 0.446472590016315 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 22393 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-32 chr4 45461849 45462093 + 0.446472590016315 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -53205 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315 chr11 96766136 96766367 + 0.446472590016315 NA Intergenic B1F1|SINE|Alu 11304 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-19 chr15 98691645 98691976 + 0.446472590016315 NA Intergenic Intergenic -14349 NM_172612 223881 Mm.274010 NM_172612 ENSMUSG00000054855 Rnd1 A830014L09Rik|Arhs Rho family GTPase 1 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-20 chr16 62853632 62853989 + 0.446472590016315 NA promoter-TSS (NM_011173) promoter-TSS (NM_011173) -497 NM_011173 19128 Mm.127156 NM_011173 ENSMUSG00000022912 Pros1 AW214361 protein S (alpha) protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-26 chr9 77045361 77045604 + 0.446472590016315 NA exon (NM_012033, exon 1 of 11) exon (NM_012033, exon 1 of 11) 299 NM_012033 26944 Mm.23199 NM_012033 ENSMUSG00000032357 Tinag AI452335|TIN-ag tubulointerstitial nephritis antigen protein-coding unique_peak2_16_10_0.357454218272399_3.6381587277735_0.446472590016315 chr11 114676026 114676244 + 0.446472590016315 NA intron (NM_053273, intron 1 of 13) intron (NM_053273, intron 1 of 13) 667 NM_053273 117160 Mm.271934 NM_053273 ENSMUSG00000034714 Ttyh2 1110001A03Rik tweety family member 2 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-16 chr3 135689441 135689678 + 0.446472590016315 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 1988 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-12 chr11 99473698 99473917 + 0.446472590016315 NA Intergenic Intergenic 19303 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-12 chr6 134671533 134671736 + 0.446472590016315 NA intron (NM_001170479, intron 2 of 3) intron (NM_001170479, intron 2 of 3) 30694 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-9 chr16 26445208 26445427 + 0.446472590016315 NA Intergenic Intergenic -17818 NM_053241 114141 Mm.275205 NM_053241 ENSMUSG00000038148 Cldn16 PCLN1|claudin-16 claudin 16 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-4 chr12 77956332 77956575 + 0.446472590016315 NA Intergenic Intergenic -270202 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-15 chr3 28523799 28524035 + 0.446472590016315 NA intron (NM_026910, intron 4 of 32) intron (NM_026910, intron 4 of 32) 103974 NR_130342 100628591 NR_130342 ENSMUSG00000092990 Mir466q Mir446q|mmu-mir-466q|mu-mir-446q microRNA 466q ncRNA common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-18 chr7 24547248 24547547 + 0.446472590016315 NA intron (NM_001360168, intron 2 of 17) intron (NM_001360168, intron 2 of 17) 698 NM_001360170 22594 Mm.4347 NM_009532 ENSMUSG00000051768 Xrcc1 Xrcc-1 X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-22 chr7 89739423 89739721 + 0.446472590016315 NA intron (NM_181407, intron 2 of 13) intron (NM_181407, intron 2 of 13) 106754 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-7 chr13 70798655 70798982 + 0.446472590016315 NA intron (NM_172053, intron 4 of 22) intron (NM_172053, intron 4 of 22) 42993 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-3 chr12 52835745 52836027 + 0.446472590016315 NA intron (NM_198111, intron 2 of 13) intron (NM_198111, intron 2 of 13) 136503 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-14 chr7 49271958 49272286 + 0.446472590016315 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 25933 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-31 chr3 104794957 104795170 + 0.446472590016315 NA TTS (NM_001291859) TTS (NM_001291859) 6029 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-7 chr1 169703038 169703555 + 0.446472590016315 NA Intergenic Intergenic 44346 NM_009062 19736 Mm.41642 NM_009062 ENSMUSG00000038530 Rgs4 AA004315|AA597169|ESTM48|ESTM50 regulator of G-protein signaling 4 protein-coding unique_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-17 chr4 41759935 41760299 + 0.446472590016315 NA promoter-TSS (NM_001172054) promoter-TSS (NM_001172054) -326 NM_001163401 16157 Mm.193451 NM_010549 ENSMUSG00000073889 Il11ra1 AI314697|GP130|Il-11ra|Il11ra|Il11ra2|NR1 interleukin 11 receptor, alpha chain 1 protein-coding common_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-5 chr13 94132997 94133253 + 0.446472590016315 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 75329 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-13 chr2 131511231 131511434 + 0.446472590016315 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 19470 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-40 chr6 121100763 121101007 + 0.446472590016315 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -19258 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak1_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-3 chr2 168455955 168456176 + 0.446472590016315 NA Intergenic Intergenic 134300 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-8 chr4 84637393 84637618 + 0.446472590016315 NA intron (NM_172870, intron 1 of 5) intron (NM_172870, intron 1 of 5) 37581 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_11_14_-0.588959969590024_3.61241061081351_0.446472590016315-11 chr6 118479142 118479359 + 0.446472590016315 NA promoter-TSS (NM_011763) promoter-TSS (NM_011763) 23 NM_011763 22750 Mm.106970 NM_011763 ENSMUSG00000072623 Zfp9 1810048F22Rik|AU016736|Krox-4|Zfp-9|mszf79-2 zinc finger protein 9 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-27 chr2 36260400 36260610 + 0.446472590016315 NA Intergenic Intergenic 30079 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding unique_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-22 chr18 68256639 68256828 + 0.446472590016315 NA Intergenic Intergenic 4240 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA common_peak1_16_10_0.357454218272399_3.6381587277735_0.446472590016315-4 chr10 21784518 21784706 + 0.446472590016315 NA Intergenic Intergenic 93767 NR_045843 432436 Mm.244553 NM_001004162 ENSMUSG00000056716 Gm5420 EG432436 predicted gene 5420 ncRNA common_peak2_286_251_-0.111716285898594_7.92142178055062_0.446426551938067 chr4 127329081 127331916 + 0.446426551938067 NA intron (NM_001160012, intron 1 of 1) intron (NM_001160012, intron 1 of 1) 338 NM_001160012 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak1_286_251_-0.111716285898594_7.92142178055062_0.446426551938067 chr7 28923149 28925380 + 0.446426551938067 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 38068 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_103_96_-0.188484626878504_6.50567052874788_0.446284217035615-2 chr8 71922862 71923708 + 0.446284217035615 NA intron (NM_133358, intron 1 of 3) B4A|SINE|B4 460 NM_133358 170938 Mm.480419 NM_133358 ENSMUSG00000066880 Zfp617 Zfps11-6 zinc finger protein 617 protein-coding common_peak1_103_96_-0.188484626878504_6.50567052874788_0.446284217035615-2 chr5 77386327 77387179 + 0.446284217035615 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 21292 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_103_96_-0.188484626878504_6.50567052874788_0.446284217035615 chr19 32388694 32389688 + 0.446284217035615 NA promoter-TSS (NR_033198) promoter-TSS (NR_033198) -25 NR_033198 67188 Mm.391160 NR_033198 ENSMUSG00000097787 2700046G09Rik - RIKEN cDNA 2700046G09 gene ncRNA common_peak1_103_96_-0.188484626878504_6.50567052874788_0.446284217035615 chr1 89069026 89070064 + 0.446284217035615 NA promoter-TSS (NM_133816) promoter-TSS (NM_133816) -870 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_116_85_0.15388964463468_6.50320957701944_0.44628421703559 chr16 92693750 92694806 + 0.44628421703559 NA intron (NM_001111022, intron 3 of 6) intron (NM_001111022, intron 3 of 6) 3051 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_117_85_0.166081351047337_6.50930543022577_0.44628421703559 chr9 79216263 79217006 + 0.44628421703559 NA Intergenic Intergenic 302668 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA common_peak1_116_85_0.15388964463468_6.50320957701944_0.44628421703559-2 chr8 4252393 4253332 + 0.44628421703559 NA promoter-TSS (NM_133968) promoter-TSS (NM_133968) -240 NM_133968 102209 Mm.28452 NM_133968 ENSMUSG00000011837 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 protein-coding common_peak1_146_133_-0.158950424437507_6.98661397823902_0.446144815506658 chr7 45460191 45461409 + 0.446144815506658 NA promoter-TSS (NM_010240) promoter-TSS (NM_010240) -914 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding unique_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-2 chr3 58526116 58526618 + 0.446094173747089 NA promoter-TSS (NM_030685) promoter-TSS (NM_030685) -483 NM_030685 28146 Mm.29702 NM_030685 ENSMUSG00000027808 Serp1 D3Ucla1|Ramp4 stress-associated endoplasmic reticulum protein 1 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-4 chr19 16925126 16925574 + 0.446094173747089 NA Intergenic Intergenic -30768 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-8 chr8 106892155 106892557 + 0.446094173747089 NA intron (NM_145412, intron 1 of 3) intron (NM_145412, intron 1 of 3) 1237 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding unique_peak2_28_30_-0.372228309436364_4.76808215566869_0.446094173747089 chr1 173766451 173766835 + 0.446094173747089 NA intron (NM_008329, intron 1 of 8) intron (NM_008329, intron 1 of 8) 276 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-3 chr15 7887097 7887403 + 0.446094173747089 NA intron (NM_001081402, intron 15 of 17) intron (NM_001081402, intron 15 of 17) 71700 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-4 chr2 117018212 117018686 + 0.446094173747089 NA Intergenic Intergenic -102622 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-3 chr6 50390698 50391098 + 0.446094173747089 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -8061 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-6 chr4 43729065 43729413 + 0.446094173747089 NA promoter-TSS (NM_001348108) promoter-TSS (NM_001348108) -795 NM_001348108 71406 Mm.33063 NM_027789 ENSMUSG00000028475 Spaar 5430416O09Rik|AI481365|Spar small regulatory polypeptide of amino acid response protein-coding common_peak2_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-3 chr2 77269196 77269579 + 0.446094173747089 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 11205 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089 chr11 31542056 31542673 + 0.446094173747089 NA Intergenic Intergenic 129498 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-2 chr12 36157377 36157824 + 0.446094173747089 NA promoter-TSS (NM_025840) promoter-TSS (NM_025840) 476 NM_146033 217473 Mm.130422 NM_146033 ENSMUSG00000036188 Ankmy2 AI035571|ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding unique_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089 chr12 70825050 70825260 + 0.446094173747089 NA promoter-TSS (NM_028127) promoter-TSS (NM_028127) -359 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-7 chr4 155624978 155625327 + 0.446094173747089 NA promoter-TSS (NR_040441) promoter-TSS (NR_040441) 298 NM_001355568 12537 Mm.267410 NM_007661 ENSMUSG00000029062 Cdk11b AA989746|CDK11-p110|CDK11-p46|CDK11-p58|Cdc11b|Cdc2l1|Cdc2l2|Cdk11|p58 cyclin-dependent kinase 11B protein-coding common_peak2_28_30_-0.372228309436364_4.76808215566869_0.446094173747089 chr19 32320040 32320623 + 0.446094173747089 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 28985 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-5 chr3 88835283 88835534 + 0.446094173747089 NA intron (NM_027389, intron 1 of 31) CpG 177 NM_001242372 76022 Mm.126870 NM_027389 ENSMUSG00000054199 Gon4l 1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005 gon-4-like (C.elegans) protein-coding common_peak2_28_30_-0.372228309436364_4.76808215566869_0.446094173747089-2 chr2 36048839 36049237 + 0.446094173747089 NA promoter-TSS (NM_029309) promoter-TSS (NM_029309) 254 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-7 chr6 146964672 146965223 + 0.446094173747083 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -10526 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-7 chr6 147475888 147476306 + 0.446094173747083 NA promoter-TSS (NM_001355713) promoter-TSS (NM_001355713) 226 NM_001355715 67015 Mm.209774 NM_025911 ENSMUSG00000030301 Ccdc91 1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56 coiled-coil domain containing 91 protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-2 chr15 10665569 10666311 + 0.446094173747083 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 47600 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-4 chr12 80436203 80436699 + 0.446094173747083 NA 5' UTR (NM_177267, exon 1 of 9) 5' UTR (NM_177267, exon 1 of 9) 150 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-5 chr2 164785166 164785623 + 0.446094173747083 NA promoter-TSS (NM_133924) promoter-TSS (NM_133924) -627 NM_133924 101113 Mm.295647 NM_133924 ENSMUSG00000050373 Snx21 5730407K14Rik|AI481716 sorting nexin family member 21 protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-4 chr2 148289098 148289829 + 0.446094173747083 NA Intergenic Intergenic -105914 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-9 chr7 100927159 100927774 + 0.446094173747083 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 4695 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-3 chr16 20536431 20537028 + 0.446094173747083 NA intron (NM_001302970, intron 1 of 10) intron (NM_001302970, intron 1 of 10) 1249 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-10 chr9 124312320 124312911 + 0.446094173747083 NA promoter-TSS (NM_001243117) promoter-TSS (NM_001243117) 79 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-3 chr11 113263997 113264577 + 0.446094173747083 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -54618 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA unique_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083 chr13 104289018 104289479 + 0.446094173747083 NA intron (NR_136938, intron 1 of 26) intron (NR_136938, intron 1 of 26) 1413 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083 chr4 106651191 106651592 + 0.446094173747083 NA intron (NM_001285784, intron 1 of 1) intron (NM_001285784, intron 1 of 1) 322 NM_001083887 230577 Mm.134029 NM_172272 ENSMUSG00000043572 Pars2 BC027073 prolyl-tRNA synthetase (mitochondrial)(putative) protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-8 chr7 83717827 83718196 + 0.446094173747083 NA intron (NM_001360088, intron 2 of 18) intron (NM_001360088, intron 2 of 18) 14387 NM_001360087 16170 Mm.10137 NM_010551 ENSMUSG00000001741 Il16 mKIAA4048 interleukin 16 protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083 chr1 34841683 34842205 + 0.446094173747083 NA intron (NM_001160236, intron 1 of 6) intron (NM_001160236, intron 1 of 6) 1106 NM_174997 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b Mani|mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-6 chr6 135064907 135065344 + 0.446094173747083 NA promoter-TSS (NM_181444) promoter-TSS (NM_181444) -537 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-5 chr13 54503892 54504260 + 0.446094173747083 NA intron (NM_176987, intron 1 of 9) CpG 271 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-6 chr14 54863623 54864089 + 0.446094173747083 NA intron (NM_001177705, intron 1 of 1) CpG 302 NM_001177705 239099 Mm.280994 NM_183174 ENSMUSG00000057156 Homez mKIAA1443 homeodomain leucine zipper-encoding gene protein-coding unique_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083-2 chr7 105640032 105640309 + 0.446094173747083 NA promoter-TSS (NM_001360053) promoter-TSS (NM_001360053) 246 NM_029802 76932 Mm.41637 NM_029802 ENSMUSG00000030881 Arfip2 2310002N04Rik|POR|Por1 ADP-ribosylation factor interacting protein 2 protein-coding common_peak2_35_24_0.24785505889798_4.76778371922371_0.446094173747083-2 chr1 74279035 74279328 + 0.446094173747083 NA TTS (NM_001190444) TTS (NM_001190444) 581 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak1_35_24_0.24785505889798_4.76778371922371_0.446094173747083 chr1 75504825 75505478 + 0.446094173747083 NA intron (NM_001310679, intron 1 of 8) intron (NM_001310679, intron 1 of 8) 1301 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding common_peak2_53_52_-0.255373603663039_5.60023365273168_0.445962842009412 chr11 62602950 62603533 + 0.445962842009412 NA promoter-TSS (NR_028550) promoter-TSS (NR_028550) 155 NR_028526 100217426 NR_028526 ENSMUSG00000064437 Snord49b MBII-252|MBII-366 small nucleolar RNA, C/D box 49B snoRNA common_peak1_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-2 chr10 24391481 24391993 + 0.445962842009412 NA Intergenic Intergenic 168220 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-4 chr16 97961624 97962192 + 0.445962842009412 NA intron (NM_175428, intron 1 of 2) intron (NM_175428, intron 1 of 2) 714 NM_001081685 114565 Mm.474489 NM_175428 ENSMUSG00000046962 Zbtb21 5430437K12Rik|B430213I24Rik|Zfp295|Znf295|mKIAA1227 zinc finger and BTB domain containing 21 protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-6 chr2 155956292 155956969 + 0.445962842009412 NA promoter-TSS (NM_001129999) promoter-TSS (NM_001129999) 72 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak2_52_52_-0.282150399293339_5.58684525491653_0.445962842009412-4 chr3 94657883 94658726 + 0.445962842009412 NA intron (NM_011656, intron 1 of 12) intron (NM_011656, intron 1 of 12) 568 NM_001293728 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding common_peak1_52_52_-0.282150399293339_5.58684525491653_0.445962842009412 chr11 78396777 78397573 + 0.445962842009412 NA TTS (NM_022411) TTS (NM_022411) 2690 NR_003282 790911 Mm.457257 NR_003282 ENSMUSG00000085747 Slc13a2os Gm11194 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand ncRNA common_peak1_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-3 chr4 134931002 134931572 + 0.445962842009412 NA intron (NM_026780, intron 2 of 6) CpG-10479 307 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-7 chr3 105058128 105058949 + 0.445962842009412 NA Intergenic MIRc|SINE|MIR -5392 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-2 chr11 95712535 95713480 + 0.445962842009412 NA promoter-TSS (NR_045780) promoter-TSS (NR_045780) -253 NR_045780 432396 Mm.426849 NR_045780 ENSMUSG00000086191 Zfp652os 1110035M17Rik zinc finger protein 652, opposite strand ncRNA common_peak2_52_52_-0.282150399293339_5.58684525491653_0.445962842009412-2 chr19 5431969 5433031 + 0.445962842009412 NA Intergenic Intergenic 7356 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak2_62_44_0.201517201917159_5.59261169728825_0.445962842009412-2 chr18 6959496 6959962 + 0.445962842009412 NA intron (NM_177595, intron 5 of 6) intron (NM_177595, intron 5 of 6) 45050 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-8 chr9 21592563 21593473 + 0.445962842009412 NA promoter-TSS (NM_138303) promoter-TSS (NM_138303) -187 NM_138303 74766 Mm.475712 NM_138303 ENSMUSG00000032182 Yipf2 1300010K09Rik Yip1 domain family, member 2 protein-coding common_peak1_52_52_-0.282150399293339_5.58684525491653_0.445962842009412-2 chr6 50354475 50355321 + 0.445962842009412 NA intron (NM_027881, intron 2 of 21) intron (NM_027881, intron 2 of 21) 27939 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412 chr10 86705876 86706651 + 0.445962842009412 NA promoter-TSS (NM_011631) promoter-TSS (NM_011631) 452 NM_001003939 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding common_peak2_62_44_0.201517201917159_5.59261169728825_0.445962842009412-4 chr6 125231239 125232041 + 0.445962842009412 NA TTS (NM_001286753) TTS (NM_001286753) 220 NM_145391 213233 Mm.296902 NM_145391 ENSMUSG00000038213 Tapbpl BC017613|TAPBPL-R|Tapbplr TAP binding protein-like protein-coding common_peak2_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-3 chr2 120563451 120563940 + 0.445962842009412 NA 5' UTR (NM_011743, exon 1 of 22) 5' UTR (NM_011743, exon 1 of 22) 164 NM_011743 20402 Mm.485295 NM_011743 ENSMUSG00000027288 Zfp106 Cd-1|D2Dcr28|EyeLinc12|H3a|Sh3bp3|Znf106|sirm|zfp-106 zinc finger protein 106 protein-coding common_peak2_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-2 chr14 34087312 34087860 + 0.445962842009412 NA intron (NM_013473, intron 1 of 11) intron (NM_013473, intron 1 of 11) 1607 NM_013473 11752 Mm.3267 NM_013473 ENSMUSG00000021950 Anxa8 AI466995|Anx8 annexin A8 protein-coding common_peak2_62_44_0.201517201917159_5.59261169728825_0.445962842009412 chr13 98263194 98263751 + 0.445962842009412 NA promoter-TSS (NM_178918) promoter-TSS (NM_178918) 396 NM_001271388 68558 Mm.209642 NM_023472 ENSMUSG00000021661 Ankra2 1110004M18Rik|Ankra ankyrin repeat, family A (RFXANK-like), 2 protein-coding common_peak2_52_52_-0.282150399293339_5.58684525491653_0.445962842009412-5 chr5 92752012 92752811 + 0.445962842009412 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 36151 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak2_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-5 chr7 64275716 64276693 + 0.445962842009412 NA Intergenic Intergenic -11466 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_52_52_-0.282150399293339_5.58684525491653_0.445962842009412 chr10 71237447 71238140 + 0.445962842009412 NA intron (NM_009360, intron 1 of 6) CpG 251 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding common_peak1_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-4 chr8 115904476 115905211 + 0.445962842009412 NA Intergenic Intergenic -197949 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_53_52_-0.255373603663039_5.60023365273168_0.445962842009412-4 chr4 47151862 47152465 + 0.445962842009412 NA Intergenic Intergenic -55849 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-3 chr11 98951089 98951940 + 0.445962842009412 NA intron (NM_009024, intron 2 of 8) intron (NM_009024, intron 2 of 8) -8957 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_52_52_-0.282150399293339_5.58684525491653_0.445962842009412-3 chr19 59862892 59863884 + 0.445962842009412 NA Intergenic MIR|SINE|MIR 79976 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_62_44_0.201517201917159_5.59261169728825_0.445962842009412-5 chr17 5848979 5849670 + 0.445962842009412 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 7944 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak2_62_44_0.201517201917159_5.59261169728825_0.445962842009412-3 chr3 144642984 144643774 + 0.445962842009412 NA Intergenic Intergenic 72952 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_53_52_-0.255373603663039_5.60023365273168_0.445962842009412 chr1 90050552 90051146 + 0.445962842009412 NA intron (NM_029122, intron 16 of 18) intron (NM_029122, intron 16 of 18) -36183 NM_139152 208372 Mm.215164 NM_139152 ENSMUSG00000067081 Asb18 Asb-18 ankyrin repeat and SOCS box-containing 18 protein-coding common_peak1_84_80_-0.217417226367538_6.23114138970086_0.445902247262471 chr19 41847474 41848450 + 0.445902247262471 NA 5' UTR (NM_177603, exon 1 of 1) 5' UTR (NM_177603, exon 1 of 1) 170 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak2_85_80_-0.200662452248435_6.23951877676041_0.445902247262471 chr11 60537758 60538814 + 0.445902247262471 NA 5' UTR (NM_172943, exon 1 of 4) 5' UTR (NM_172943, exon 1 of 4) 603 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak2_97_70_0.176556044288128_6.23802514164875_0.445902247262471 chr16 93832232 93832908 + 0.445902247262471 NA intron (NM_001045529, intron 1 of 16) CpG 449 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_85_80_-0.200662452248435_6.23951877676041_0.445902247262471-2 chr17 27622571 27623363 + 0.445902247262471 NA promoter-TSS (NM_001291046) promoter-TSS (NM_001291046) -3 NM_001291046 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding common_peak2_85_80_-0.200662452248435_6.23951877676041_0.445902247262471-3 chr2 156863080 156863867 + 0.445902247262471 NA promoter-TSS (NR_015591) promoter-TSS (NR_015591) 351 NM_026124 67388 Mm.29264 NM_026124 ENSMUSG00000027637 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene protein-coding common_peak1_85_80_-0.200662452248435_6.23951877676041_0.445902247262471 chr10 128564778 128565848 + 0.445902247262471 NA intron (NM_011119, intron 1 of 11) CpG 621 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding common_peak1_97_70_0.176556044288128_6.23802514164875_0.445902247262471 chr4 120405275 120406338 + 0.445902247262471 NA intron (NM_013883, intron 1 of 16) CpG 525 NM_013883 29871 Mm.427014 NM_013883 ENSMUSG00000000085 Scmh1 AI315320|AI851618|Scml1|Scml3 sex comb on midleg homolog 1 protein-coding common_peak2_138_102_0.140476524199868_6.75673878928315_0.445869382556218-2 chr2 155818158 155819116 + 0.445869382556218 NA TTS (NM_010808) TTS (NM_010808) 566 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak1_139_102_0.150745506216097_6.76187328029127_0.445869382556218-2 chr16 55630636 55632250 + 0.445869382556218 NA Intergenic Intergenic 136712 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_138_102_0.140476524199868_6.75673878928315_0.445869382556218 chr6 113046373 113047693 + 0.445869382556218 NA intron (NM_001355266, intron 1 of 9) intron (NM_001355266, intron 1 of 9) 731 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding common_peak1_139_102_0.150745506216097_6.76187328029127_0.445869382556218 chr13 119428495 119429680 + 0.445869382556218 NA 5' UTR (NM_145457, exon 1 of 11) 5' UTR (NM_145457, exon 1 of 11) 185 NM_145457 218693 Mm.490243 NM_145457 ENSMUSG00000025451 Paip1 PAIP-1 polyadenylate binding protein-interacting protein 1 protein-coding common_peak2_138_102_0.140476524199868_6.75673878928315_0.445869382556218-3 chr3 5574826 5576075 + 0.445869382556218 NA intron (NM_008994, intron 1 of 5) intron (NM_008994, intron 1 of 5) 798 NM_001163301 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding common_peak2_138_102_0.140476524199868_6.75673878928315_0.445869382556218 chr10 17011210 17012411 + 0.445869382556218 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 83972 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_139_102_0.150745506216097_6.76187328029127_0.445869382556218 chr7 4148685 4149885 + 0.445869382556218 NA exon (NM_175529, exon 1 of 1) exon (NM_175529, exon 1 of 1) 587 NM_175529 243813 Mm.347643 NM_175529 ENSMUSG00000043432 Leng9 9530024C23Rik|F630035L11Rik leukocyte receptor cluster (LRC) member 9 protein-coding common_peak1_505_387_0.0779658588419032_8.63889577160808_0.445179104565684 chr6 86524110 86527777 + 0.445179104565684 NA 5' UTR (NM_011865, exon 1 of 1) 5' UTR (NM_011865, exon 1 of 1) 246 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1|hnRNP-E1 poly(rC) binding protein 1 protein-coding common_peak1_396_343_-0.0959151998201264_8.37830715479203_0.445056846374996 chr2 126674072 126676823 + 0.445056846374996 NA promoter-TSS (NM_001355109) promoter-TSS (NM_001355109) -95 NM_001355109 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak1_147_134_-0.159964815139877_6.99683318948089_0.445005668495363 chr9 50616338 50617636 + 0.445005668495363 NA promoter-TSS (NM_028300) promoter-TSS (NM_028300) -334 NM_028300 72614 Mm.147232 NM_028300 ENSMUSG00000000167 Pih1d2 2700059L22Rik PIH1 domain containing 2 protein-coding common_peak2_189_141_0.124963274647856_7.21222875682861_0.444870339560376 chr15 102203181 102204943 + 0.444870339560376 NA promoter-TSS (NM_001289695) promoter-TSS (NM_001289695) 62 NM_001358674 68744 Mm.352945 NM_153194 ENSMUSG00000046897 Zfp740 1110034O07Rik|AW548228|Znf740 zinc finger protein 740 protein-coding common_peak1_104_97_-0.189573228915194_6.51992322965761_0.444694812276494-3 chr8 122376653 122377349 + 0.444694812276494 NA intron (NM_001029993, intron 1 of 18) CpG 385 NM_001029993 76014 Mm.241489 NM_001029993 ENSMUSG00000017478 Zc3h18 1190001B23Rik|5830416A07Rik|Nhn1 zinc finger CCCH-type containing 18 protein-coding common_peak2_104_97_-0.189573228915194_6.51992322965761_0.444694812276494 chr1 79760504 79761742 + 0.444694812276494 NA intron (NM_027057, intron 1 of 4) intron (NM_027057, intron 1 of 4) 646 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding common_peak1_104_97_-0.189573228915194_6.51992322965761_0.444694812276494-2 chr7 67967016 67968269 + 0.444694812276494 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 15385 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_104_97_-0.189573228915194_6.51992322965761_0.444694812276494 chr15 97787172 97787832 + 0.444694812276494 NA intron (NM_026353, intron 1 of 2) intron (NM_026353, intron 1 of 2) 3137 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak1_118_86_0.16149143148861_6.52368921159303_0.444694812276494 chr13 59822392 59823668 + 0.444694812276494 NA intron (NM_153538, intron 1 of 27) CpG 117 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak2_118_86_0.16149143148861_6.52368921159303_0.444694812276494 chr8 94602010 94603154 + 0.444694812276494 NA promoter-TSS (NM_028221) promoter-TSS (NM_028221) 641 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding common_peak2_278_210_0.103966575727261_7.77308247657082_0.44467162171131 chr6 86526194 86527644 + 0.44467162171131 NA promoter-TSS (NM_011865) promoter-TSS (NM_011865) -411 NR_037960 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA common_peak2_125_115_-0.171665676453981_6.77214815690058_0.444539229906122 chr13 14039218 14040279 + 0.444539229906122 NA promoter-TSS (NR_130788) promoter-TSS (NR_130788) -110 NM_178337 70430 Mm.260209 NM_178337 ENSMUSG00000039233 Tbce 2610206D02Rik|C530005D02Rik|pmn tubulin-specific chaperone E protein-coding common_peak1_125_115_-0.171665676453981_6.77214815690058_0.444539229906122 chr15 85574938 85575823 + 0.444539229906122 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 2690 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_218_163_0.120644053602053_7.41787403141911_0.444355209468018 chr3 30792677 30794195 + 0.444355209468018 NA intron (NM_001357528, intron 1 of 8) CpG 560 NM_001357528 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak1_69_66_-0.221788177485213_5.95519510171517_0.44415727438309 chr11 32226494 32227396 + 0.44415727438309 NA intron (NM_010822, intron 1 of 3) PB1D10|SINE|Alu 440 NM_010822 268395 Mm.263161 NM_010822 ENSMUSG00000020287 Mpg 9830006D05|AI326268|APNG|Aag|Mid1 N-methylpurine-DNA glycosylase protein-coding common_peak2_69_66_-0.221788177485213_5.95519510171517_0.44415727438309-3 chr7 19572552 19573666 + 0.44415727438309 NA intron (NM_027189, intron 1 of 1) CpG 234 NM_027189 69731 Mm.24540 NM_027189 ENSMUSG00000044709 Gemin7 2400008I04Rik|AI120175|AI461688 gem nuclear organelle associated protein 7 protein-coding common_peak2_69_66_-0.221788177485213_5.95519510171517_0.44415727438309 chr12 111966448 111966963 + 0.44415727438309 NA 5' UTR (NM_001361914, exon 1 of 4) 5' UTR (NM_001361914, exon 1 of 4) 304 NM_027360 70257 Mm.318 NM_027360 ENSMUSG00000021290 2010107E04Rik 9430003J03Rik|AU043134|AV124504|Mp68 RIKEN cDNA 2010107E04 gene protein-coding common_peak1_69_66_-0.221788177485213_5.95519510171517_0.44415727438309-2 chr17 78392807 78393844 + 0.44415727438309 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 24827 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_68_66_-0.242400286434063_5.94488904724074_0.44415727438309 chr1 33719674 33720578 + 0.44415727438309 NA promoter-TSS (NM_001159729) promoter-TSS (NM_001159729) 230 NM_008999 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding common_peak1_69_66_-0.221788177485213_5.95519510171517_0.44415727438309-3 chr6 54202533 54203416 + 0.44415727438309 NA intron (NM_001163640, intron 3 of 12) MER5A|DNA|hAT-Charlie -61884 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_69_66_-0.221788177485213_5.95519510171517_0.44415727438309-2 chr2 120976935 120977629 + 0.44415727438309 NA 5' UTR (NM_175285, exon 1 of 14) 5' UTR (NM_175285, exon 1 of 14) 220 NM_175285 96957 Mm.315212 NM_175285 ENSMUSG00000054484 Tmem62 B830009D23Rik|C77355 transmembrane protein 62 protein-coding common_peak1_80_57_0.195401458000042_5.95568172412759_0.444157274383078-2 chr19 4811777 4812392 + 0.444157274383078 NA promoter-TSS (NM_019869) promoter-TSS (NM_019869) -450 NM_019869 56275 Mm.276338 NM_019869 ENSMUSG00000006456 Rbm14 1300007E16Rik|PSP2|Sytip|p16|p16K RNA binding motif protein 14 protein-coding common_peak2_79_57_0.177605988697614_5.94678398947638_0.444157274383078-2 chr19 3638073 3638876 + 0.444157274383078 NA intron (NM_008513, intron 5 of 22) intron (NM_008513, intron 5 of 22) 48090 NM_008513 16973 Mm.274581 NM_008513 ENSMUSG00000024913 Lrp5 BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142 low density lipoprotein receptor-related protein 5 protein-coding common_peak1_80_57_0.195401458000042_5.95568172412759_0.444157274383078-5 chr7 113513898 113514828 + 0.444157274383078 NA intron (NM_001360668, intron 1 of 12) intron (NM_001360668, intron 1 of 12) 529 NM_001360669 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak2_80_57_0.195401458000042_5.95568172412759_0.444157274383078 chr17 73984964 73985860 + 0.444157274383078 NA Intergenic Intergenic -35216 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_80_57_0.195401458000042_5.95568172412759_0.444157274383078-4 chr5 144965477 144966143 + 0.444157274383078 NA promoter-TSS (NM_029438) promoter-TSS (NM_029438) 20 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak2_80_57_0.195401458000042_5.95568172412759_0.444157274383078-3 chr6 108538501 108539692 + 0.444157274383078 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 49353 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_79_57_0.177605988697614_5.94678398947638_0.444157274383078 chr10 97313162 97313844 + 0.444157274383078 NA Intergenic Intergenic -109975 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA common_peak1_79_57_0.177605988697614_5.94678398947638_0.444157274383078-2 chr9 7837222 7837867 + 0.444157274383078 NA promoter-TSS (NM_001291503) promoter-TSS (NM_001291503) -487 NM_007465 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak1_80_57_0.195401458000042_5.95568172412759_0.444157274383078 chr1 88874552 88875425 + 0.444157274383078 NA Intergenic Intergenic 120098 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak1_80_57_0.195401458000042_5.95568172412759_0.444157274383078-3 chr19 32107371 32108314 + 0.444157274383078 NA Intergenic ERVB3_1-I_MM-int|LTR|ERVK -4702 NM_018830 54447 Mm.491229 NM_018830 ENSMUSG00000024887 Asah2 AI585898 N-acylsphingosine amidohydrolase 2 protein-coding common_peak2_79_57_0.177605988697614_5.94678398947638_0.444157274383078 chr10 97313169 97313837 + 0.444157274383078 NA Intergenic Intergenic -109975 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA common_peak1_79_57_0.177605988697614_5.94678398947638_0.444157274383078-3 chr9 59539319 59540178 + 0.444157274383078 NA exon (NM_010421, exon 1 of 14) exon (NM_010421, exon 1 of 14) 208 NM_010421 15211 Mm.2284 NM_010421 ENSMUSG00000025232 Hexa Hex-1 hexosaminidase A protein-coding common_peak2_80_57_0.195401458000042_5.95568172412759_0.444157274383078-2 chr3 132871660 132872464 + 0.444157274383078 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 6534 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_313_237_0.0995445681432185_7.94459004737955_0.444061315854678 chr16 45069161 45071843 + 0.444061315854678 NA Intergenic Intergenic -23509 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_279_211_0.102270599262873_7.77905575419464_0.444016889777067 chr9 63719089 63721761 + 0.444016889777067 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 37569 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_98_71_0.170921605609657_6.25538580424714_0.443993257208683-2 chr6 149100788 149102086 + 0.443993257208683 NA 5' UTR (NM_177192, exon 1 of 21) 5' UTR (NM_177192, exon 1 of 21) 243 NM_177192 320560 Mm.426874 NM_177192 ENSMUSG00000030313 Dennd5b 9330160C06Rik|AI852444|D030011O10Rik|Gm17524 DENN/MADD domain containing 5B protein-coding common_peak1_98_71_0.170921605609657_6.25538580424714_0.443993257208683 chr2 126361644 126363051 + 0.443993257208683 NA intron (NM_001359975, intron 20 of 27) intron (NM_001359975, intron 20 of 27) 129206 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_98_71_0.170921605609657_6.25538580424714_0.443993257208683-3 chr7 29981076 29981777 + 0.443993257208683 NA Intergenic Intergenic -2529 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak2_190_142_0.122358848168628_7.2210507608627_0.443904254496326-2 chr8 122523356 122524931 + 0.443904254496326 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 27186 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_173_156_-0.145927104860149_7.22165719646155_0.443904254496326 chr19 8740759 8742616 + 0.443904254496326 NA promoter-TSS (NM_019829) promoter-TSS (NM_019829) -116 NM_019829 56389 Mm.153061 NM_019829 ENSMUSG00000010110 Stx5a 0610031F24Rik|D19Ertd627e|Stx5 syntaxin 5A protein-coding common_peak2_190_142_0.122358848168628_7.2210507608627_0.443904254496326 chr19 10605635 10606560 + 0.443904254496326 NA intron (NM_015735, intron 1 of 26) intron (NM_015735, intron 1 of 26) 472 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak1_164_122_0.13009841866591_7.00756371467219_0.443884274309525 chr18 35840849 35842576 + 0.443884274309525 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 11398 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_164_122_0.13009841866591_7.00756371467219_0.443884274309525-2 chr8 70872818 70873745 + 0.443884274309525 NA intron (NM_026964, intron 1 of 4) CpG 209 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak1_164_122_0.13009841866591_7.00756371467219_0.443884274309525-3 chr9 7183838 7185528 + 0.443884274309525 NA 5' UTR (NM_001357483, exon 1 of 7) 5' UTR (NM_001357483, exon 1 of 7) 178 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding common_peak1_219_164_0.118400127958635_7.42552227822513_0.443518958962674 chr19 7205204 7206831 + 0.443518958962674 NA intron (NM_134150, intron 1 of 6) GC_rich|Low_complexity|Low_complexity 267 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding common_peak2_126_116_-0.172725098009489_6.78400217057866_0.443233298250168-2 chr16 57548824 57550355 + 0.443233298250168 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 347 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_126_116_-0.172725098009489_6.78400217057866_0.443233298250168 chr12 102877335 102878957 + 0.443233298250168 NA intron (NM_172806, intron 1 of 11) CpG 260 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding common_peak2_141_104_0.143320244467366_6.78590563989981_0.443233298250143-2 chr8 105965179 105966107 + 0.443233298250143 NA intron (NR_045594, intron 1 of 23) CpG 472 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak2_141_104_0.143320244467366_6.78590563989981_0.443233298250143 chr5 149390528 149392368 + 0.443233298250143 NA Intergenic Intergenic -20301 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_119_87_0.156990967415344_6.53792710234497_0.443139834627296 chr10 117845027 117846581 + 0.443139834627296 NA intron (NM_024457, intron 1 of 7) CpG 170 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_119_87_0.156990967415344_6.53792710234497_0.443139834627296-2 chr2 80580082 80581023 + 0.443139834627296 NA intron (NM_001290745, intron 1 of 31) intron (NM_001290745, intron 1 of 31) 630 NM_001290745 50884 Mm.25203 NM_016965 ENSMUSG00000027002 Nckap1 C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1 NCK-associated protein 1 protein-coding common_peak1_105_98_-0.190641544382993_6.53403584788811_0.443139834627271 chr19 40239561 40240755 + 0.443139834627271 NA intron (NM_016861, intron 4 of 6) intron (NM_016861, intron 4 of 6) 31458 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak1_49_34_0.233015845207342_5.24579093954864_0.443106221030906-4 chr8 83441768 83442483 + 0.443106221030906 NA intron (NM_001039137, intron 1 of 3) PB1D7|SINE|Alu 537 NM_001285992 56367 Mm.246911 NM_019708 ENSMUSG00000063253 Scoc 0610011C06Rik|2810002J11Rik|AA415030|SCOCO short coiled-coil protein protein-coding common_peak2_49_34_0.233015845207342_5.24579093954864_0.443106221030906-5 chr6 108452030 108452457 + 0.443106221030906 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -37500 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_49_34_0.233015845207342_5.24579093954864_0.443106221030906-2 chr19 46504618 46505011 + 0.443106221030906 NA intron (NM_053100, intron 1 of 5) intron (NM_053100, intron 1 of 5) 3166 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_49_34_0.233015845207342_5.24579093954864_0.443106221030906-6 chrX 18161788 18162323 + 0.443106221030906 NA promoter-TSS (NM_009483) promoter-TSS (NM_009483) -520 NM_009483 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_49_34_0.233015845207342_5.24579093954864_0.443106221030906-3 chr3 88512522 88513056 + 0.443106221030906 NA Intergenic Intergenic -9437 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_49_34_0.233015845207342_5.24579093954864_0.443106221030906-5 chr9 95193820 95194390 + 0.443106221030906 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 213165 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_49_34_0.233015845207342_5.24579093954864_0.443106221030906 chr15 53614411 53614696 + 0.443106221030906 NA promoter-TSS (NR_039538) promoter-TSS (NR_039538) -274 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_49_34_0.233015845207342_5.24579093954864_0.443106221030906-4 chr6 88965956 88966919 + 0.443106221030906 NA Intergenic B3|SINE|B2 64186 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_49_34_0.233015845207342_5.24579093954864_0.443106221030906-3 chr4 137478188 137479307 + 0.443106221030906 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 9944 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_49_34_0.233015845207342_5.24579093954864_0.443106221030906 chr1 88879149 88879812 + 0.443106221030906 NA Intergenic Intergenic 124590 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak2_49_34_0.233015845207342_5.24579093954864_0.443106221030906-2 chr18 38190795 38191172 + 0.443106221030906 NA Intergenic Intergenic 18779 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899 chr1 182519734 182520116 + 0.443106221030899 NA Intergenic Intergenic -2315 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899 chr8 57511991 57512313 + 0.443106221030899 NA intron (NM_008252, intron 1 of 4) CpG 309 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding common_peak1_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-3 chr15 13243891 13244308 + 0.443106221030899 NA Intergenic Intergenic -70424 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-2 chr15 11795038 11795415 + 0.443106221030899 NA Intergenic Intergenic 110448 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-4 chr16 43363183 43363670 + 0.443106221030899 NA intron (NM_181058, intron 2 of 6) intron (NM_181058, intron 2 of 6) 56770 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-5 chr18 60669265 60669856 + 0.443106221030899 NA non-coding (NR_045401, exon 3 of 3) non-coding (NR_045401, exon 3 of 3) 6150 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-2 chr10 125973998 125974655 + 0.443106221030899 NA intron (NM_177152, intron 3 of 18) intron (NM_177152, intron 3 of 18) 8107 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding common_peak1_40_41_-0.314302875605079_5.23516598497622_0.443106221030899 chr1 38440403 38441019 + 0.443106221030899 NA intron (NM_001290814, intron 4 of 21) intron (NM_001290814, intron 4 of 21) 186533 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-6 chr6 129235695 129236328 + 0.443106221030899 NA intron (NR_040268, intron 2 of 3) MLTR14|LTR|ERV1 2034 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-7 chr8 11330896 11331666 + 0.443106221030899 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -18455 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-3 chr16 33684514 33685034 + 0.443106221030899 NA exon (NM_175256, exon 1 of 15) exon (NM_175256, exon 1 of 15) 308 NM_175256 77446 Mm.245741 NM_172934 ENSMUSG00000075254 Heg1 4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629 heart development protein with EGF-like domains 1 protein-coding common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-4 chr16 38347034 38347517 + 0.443106221030899 NA intron (NM_001017429, intron 1 of 2) intron (NM_001017429, intron 1 of 2) 276 NM_001017429 12856 Mm.27396 NM_001017429 ENSMUSG00000046516 Cox17 AI037035 cytochrome c oxidase assembly protein 17 protein-coding common_peak1_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-5 chr2 30995232 30995917 + 0.443106221030899 NA intron (NM_028846, intron 1 of 24) intron (NM_028846, intron 1 of 24) 13295 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak2_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-8 chr8 94788577 94789337 + 0.443106221030899 NA Intergenic MT2A|LTR|ERVL 16777 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak1_40_41_-0.314302875605079_5.23516598497622_0.443106221030899-6 chr6 121086999 121087454 + 0.443106221030899 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -5599 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_54_53_-0.256055200812529_5.6268599017572_0.442998361601932 chr11 95077065 95077748 + 0.442998361601932 NA promoter-TSS (NM_001306162) promoter-TSS (NM_001306162) -595 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_54_53_-0.256055200812529_5.6268599017572_0.442998361601932-2 chr19 59861767 59862426 + 0.442998361601932 NA Intergenic Intergenic 81268 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_54_53_-0.256055200812529_5.6268599017572_0.442998361601932 chr15 93595289 93595820 + 0.442998361601932 NA intron (NM_001033217, intron 1 of 7) CpG 337 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding common_peak2_54_53_-0.256055200812529_5.6268599017572_0.442998361601932-4 chr9 46282683 46283462 + 0.442998361601932 NA promoter-TSS (NM_146000) promoter-TSS (NM_146000) 60 NM_146000 215051 Mm.32648 NM_146000 ENSMUSG00000032077 Bud13 AV305342|D030060M11Rik BUD13 homolog protein-coding common_peak1_54_53_-0.256055200812529_5.6268599017572_0.442998361601932-2 chr4 133887552 133888295 + 0.442998361601932 NA promoter-TSS (NM_001285505) promoter-TSS (NM_001285505) -126 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_54_53_-0.256055200812529_5.6268599017572_0.442998361601932-3 chr3 142765181 142766002 + 0.442998361601932 NA intron (NM_145546, intron 1 of 6) CpG 344 NM_145546 229906 Mm.271756 NM_145546 ENSMUSG00000028271 Gtf2b - general transcription factor IIB protein-coding common_peak1_64_45_0.214578137578735_5.63085102484638_0.44299836160192 chr17 88543416 88544182 + 0.44299836160192 NA intron (NM_028658, intron 2 of 21) intron (NM_028658, intron 2 of 21) 13675 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak1_64_45_0.214578137578735_5.63085102484638_0.44299836160192-2 chr7 142386634 142387321 + 0.44299836160192 NA intron (NM_009983, intron 1 of 8) intron (NM_009983, intron 1 of 8) 893 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak2_63_45_0.192368129014294_5.61974602056416_0.44299836160192 chr16 31200387 31201062 + 0.44299836160192 NA intron (NM_030138, intron 1 of 22) CpG 514 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak1_63_45_0.192368129014294_5.61974602056416_0.44299836160192-2 chr12 13248807 13249501 + 0.44299836160192 NA promoter-TSS (NM_134040) promoter-TSS (NM_134040) 20 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_63_45_0.192368129014294_5.61974602056416_0.44299836160192-2 chr2 137756209 137756969 + 0.44299836160192 NA Intergenic Intergenic -499995 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_63_45_0.192368129014294_5.61974602056416_0.44299836160192-3 chr6 146978827 146979524 + 0.44299836160192 NA intron (NM_001355729, intron 5 of 27) intron (NM_001355729, intron 5 of 27) -24754 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_64_45_0.214578137578735_5.63085102484638_0.44299836160192-2 chr13 23739876 23740699 + 0.44299836160192 NA TTS (NM_015786) TTS (NM_015786) 1480 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding common_peak1_63_45_0.192368129014294_5.61974602056416_0.44299836160192-3 chr17 17837204 17837851 + 0.44299836160192 NA exon (NM_001162909, exon 5 of 9) exon (NM_001162909, exon 5 of 9) 6552 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak2_64_45_0.214578137578735_5.63085102484638_0.44299836160192 chr11 70189541 70190187 + 0.44299836160192 NA Intergenic Intergenic 23241 NM_010796 17312 Mm.252405 NM_010796 ENSMUSG00000000318 Clec10a CD301a|M-ASGP-BP-1|Mgl|Mgl1 C-type lectin domain family 10, member A protein-coding common_peak1_63_45_0.192368129014294_5.61974602056416_0.44299836160192 chr1 74013559 74014662 + 0.44299836160192 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 110337 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_63_45_0.192368129014294_5.61974602056416_0.44299836160192-5 chr8 115081995 115082702 + 0.44299836160192 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 624546 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_63_45_0.192368129014294_5.61974602056416_0.44299836160192-4 chr8 86902412 86903045 + 0.44299836160192 NA Intergenic Intergenic -17470 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_63_45_0.192368129014294_5.61974602056416_0.44299836160192-4 chr4 132328982 132329940 + 0.44299836160192 NA promoter-TSS (NM_027925) promoter-TSS (NM_027925) 77 NM_027925 71787 Mm.239183 NM_027925 ENSMUSG00000028898 Trnau1ap 1110007F05Rik|AA387999|Secp43|Trspap1|WI1-2643G14.2 tRNA selenocysteine 1 associated protein 1 protein-coding common_peak2_64_45_0.214578137578735_5.63085102484638_0.44299836160192-3 chr17 66076122 66076986 + 0.44299836160192 NA intron (NM_001025572, intron 1 of 12) CpG 492 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding common_peak2_150_136_-0.152434178703487_7.02181499360878_0.442780220986476 chr8 72547102 72548271 + 0.442780220986476 NA intron (NM_027485, intron 1 of 2) CpG 624 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak2_261_230_-0.116741712546911_7.7933781851426_0.442725174485443 chr1 58391718 58394121 + 0.442725174485443 NA promoter-TSS (NM_025824) promoter-TSS (NM_025824) -217 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak1_317_240_0.0996063621208654_7.96269251729039_0.442337291286231 chr8 11259337 11261629 + 0.442337291286231 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -52322 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_87_82_-0.202919008323109_6.27357992718537_0.442133957617833 chr9 95193413 95194903 + 0.442133957617833 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 213112 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_87_82_-0.202919008323109_6.27357992718537_0.442133957617833 chr11 4298361 4299242 + 0.442133957617833 NA Intergenic Intergenic 32005 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_128_117_-0.162619896498199_6.80133310111274_0.441950931670513 chr14 32159962 32160909 + 0.441950931670513 NA intron (NM_001033988, intron 1 of 9) intron (NM_001033988, intron 1 of 9) 548 NM_001033988 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak1_81_58_0.188316518238596_5.97680130848114_0.441863235260255-5 chr8 111940765 111941288 + 0.441863235260255 NA intron (NM_026693, intron 1 of 3) CpG 323 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding common_peak2_81_58_0.188316518238596_5.97680130848114_0.441863235260255 chr17 84790110 84791008 + 0.441863235260255 NA 5' UTR (NM_028233, exon 1 of 38) 5' UTR (NM_028233, exon 1 of 38) 227 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_70_67_-0.222842099543608_5.97604179147853_0.441863235260255 chr2 30322718 30323974 + 0.441863235260255 NA intron (NM_198304, intron 19 of 43) intron (NM_198304, intron 19 of 43) 35970 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding common_peak1_81_58_0.188316518238596_5.97680130848114_0.441863235260255-3 chr19 36348523 36349313 + 0.441863235260255 NA Intergenic CpG -30149 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak2_70_67_-0.222842099543608_5.97604179147853_0.441863235260255 chr1 69276508 69277421 + 0.441863235260255 NA Intergenic Intergenic -168905 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding common_peak1_81_58_0.188316518238596_5.97680130848114_0.441863235260255-4 chr7 127448398 127449144 + 0.441863235260255 NA exon (NM_175163, exon 1 of 3) exon (NM_175163, exon 1 of 3) 387 NM_175163 71131 Mm.474533 NM_175163 ENSMUSG00000048921 Zfp689 4933416E05Rik|Znf689 zinc finger protein 689 protein-coding common_peak2_81_58_0.188316518238596_5.97680130848114_0.441863235260255-2 chr9 75196735 75197472 + 0.441863235260255 NA intron (NM_010864, intron 32 of 40) PB1D9|SINE|Alu -34911 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding common_peak1_81_58_0.188316518238596_5.97680130848114_0.441863235260255 chr13 63431537 63432131 + 0.441863235260255 NA promoter-TSS (NM_001042673) promoter-TSS (NM_001042673) -89 NM_001282942 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding common_peak2_70_67_-0.222842099543608_5.97604179147853_0.441863235260255-2 chr8 64543172 64544214 + 0.441863235260255 NA Intergenic Tigger7|DNA|TcMar-Tigger -29252 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_81_58_0.188316518238596_5.97680130848114_0.441863235260255-2 chr14 55671302 55672213 + 0.441863235260255 NA promoter-TSS (NM_177992) promoter-TSS (NM_177992) 149 NM_008683 18002 Mm.296566 NM_008683 ENSMUSG00000010376 Nedd8 Rub1 neural precursor cell expressed, developmentally down-regulated gene 8 protein-coding common_peak1_70_67_-0.222842099543608_5.97604179147853_0.441863235260255-2 chr2 168079211 168080641 + 0.441863235260255 NA Intergenic Intergenic -1078 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_151_137_-0.153470961379511_7.03178897608841_0.44169310921661 chr9 53666503 53667527 + 0.44169310921661 NA intron (NM_001161618, intron 1 of 17) CpG 492 NM_001161618 75717 Mm.218910 NM_027807 ENSMUSG00000032030 Cul5 4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1 cullin 5 protein-coding common_peak1_107_99_-0.17836431844781_6.55467403055082_0.441618176875428 chr1 180941980 180943295 + 0.441618176875428 NA intron (NM_144794, intron 1 of 22) CpG 119 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding common_peak1_120_88_0.152577330009927_6.55202209597136_0.441618176875403 chr4 149425411 149426617 + 0.441618176875403 NA 5' UTR (NM_022022, exon 1 of 27) 5' UTR (NM_022022, exon 1 of 27) 617 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_120_88_0.152577330009927_6.55202209597136_0.441618176875403-2 chr9 66946062 66946911 + 0.441618176875403 NA promoter-TSS (NM_001361106) promoter-TSS (NM_001361106) 73 NM_001361106 67941 Mm.30120 NM_026467 ENSMUSG00000036781 Rps27l 1810034D23Rik ribosomal protein S27-like protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-5 chr17 27042640 27043091 + 0.440892966163086 NA Intergenic Intergenic 13606 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding unique_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-2 chr2 20519539 20519965 + 0.440892966163086 NA 5' UTR (NM_029895, exon 2 of 19) 5' UTR (NM_029895, exon 2 of 19) 239 NM_001177631 208618 Mm.237935 NM_029895 ENSMUSG00000036617 Etl4 6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt enhancer trap locus 4 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-3 chr2 35342343 35342725 + 0.440892966163086 NA Intergenic Intergenic -5525 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-9 chr8 93982064 93982665 + 0.440892966163086 NA intron (NM_011787, intron 9 of 13) intron (NM_011787, intron 9 of 13) 30276 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-2 chr18 24206163 24206477 + 0.440892966163086 NA 5' UTR (NM_001361200, exon 1 of 13) 5' UTR (NM_001361200, exon 1 of 13) 326 NM_001160404 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - polypeptide N-acetylgalactosaminyltransferase 1 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-10 chr9 122178776 122179154 + 0.440892966163086 NA intron (NM_001271873, intron 12 of 12) intron (NM_001271873, intron 12 of 12) 61506 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-4 chr17 46609667 46610143 + 0.440892966163086 NA intron (NM_175168, intron 1 of 19) intron (NM_175168, intron 1 of 19) 19599 NM_175168 71461 Mm.181833 NM_175168 ENSMUSG00000023972 Ptk7 8430404F20Rik|chz|mPTK7/CCK4 PTK7 protein tyrosine kinase 7 protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086 chr1 180312118 180312610 + 0.440892966163086 NA Intergenic Intergenic -18112 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-6 chr5 140331689 140332235 + 0.440892966163086 NA promoter-TSS (NM_026510) promoter-TSS (NM_026510) 6 NM_001356584 17766 Mm.118846 NM_008637 ENSMUSG00000036639 Nudt1 Mth1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 protein-coding common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086-3 chr18 82490877 82491145 + 0.440892966163086 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 15888 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding unique_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-4 chr8 105169847 105170518 + 0.440892966163086 NA promoter-TSS (NM_001161457) promoter-TSS (NM_001161457) -492 NM_001161457 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086 chr10 111595967 111596295 + 0.440892966163086 NA Intergenic Intergenic -1858 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-8 chr9 41481833 41482322 + 0.440892966163086 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 7184 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-8 chr5 124328281 124328662 + 0.440892966163086 NA promoter-TSS (NM_001277867) promoter-TSS (NM_001277867) 382 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-5 chr4 141558874 141559175 + 0.440892966163086 NA Intergenic Intergenic 12862 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-3 chr15 7887091 7887440 + 0.440892966163086 NA intron (NM_001081402, intron 15 of 17) intron (NM_001081402, intron 15 of 17) 71715 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-5 chr4 45012879 45013205 + 0.440892966163086 NA promoter-TSS (NM_001163284) promoter-TSS (NM_001163284) -630 NM_173399 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-9 chr9 44727913 44728257 + 0.440892966163086 NA 5' UTR (NM_153537, exon 2 of 22) 5' UTR (NM_153537, exon 2 of 22) 7113 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-7 chr4 148140466 148141024 + 0.440892966163086 NA 5' UTR (NM_027985, exon 1 of 8) 5' UTR (NM_027985, exon 1 of 8) 255 NM_027985 71890 Mm.9648 NM_027985 ENSMUSG00000029003 Mad2l2 2310033C13Rik|G1-453-4|MAD2B|REV7|repro22 MAD2 mitotic arrest deficient-like 2 protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-6 chr5 135522744 135523157 + 0.440892966163086 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 22172 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding unique_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086 chr12 112794043 112794658 + 0.440892966163086 NA Intergenic Intergenic -14625 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-6 chr17 42911557 42912039 + 0.440892966163086 NA Intergenic Intergenic -35374 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086-5 chr3 108131966 108132533 + 0.440892966163086 NA intron (NM_010306, intron 1 of 8) intron (NM_010306, intron 1 of 8) 13903 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-8 chr7 105810635 105810948 + 0.440892966163086 NA intron (NM_025301, intron 1 of 2) CpG 296 NM_025301 27397 Mm.44225 NM_025301 ENSMUSG00000030879 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-3 chr14 76731953 76732413 + 0.440892966163086 NA Intergenic Intergenic -27948 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-2 chr17 21383593 21384155 + 0.440892966163086 NA 5' UTR (NM_172486, exon 1 of 4) 5' UTR (NM_172486, exon 1 of 4) 126 NM_172486 210503 Mm.33443 NM_172486 ENSMUSG00000062743 Zfp677 A830058L05Rik|Tce8 zinc finger protein 677 protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-6 chr4 148512673 148513245 + 0.440892966163086 NA intron (NM_020009, intron 29 of 57) intron (NM_020009, intron 29 of 57) -12497 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-4 chr5 115348467 115348922 + 0.440892966163086 NA exon (NM_007748, exon 2 of 3) exon (NM_007748, exon 2 of 3) 261 NM_007748 12861 Mm.43415 NM_007748 ENSMUSG00000041697 Cox6a1 VIaL cytochrome c oxidase subunit VIa polypeptide 1 protein-coding unique_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086 chr2 168549676 168550171 + 0.440892966163086 NA intron (NM_001037177, intron 3 of 6) intron (NM_001037177, intron 3 of 6) 40442 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086 chr12 16034928 16035463 + 0.440892966163086 NA Intergenic Intergenic -218410 NM_144551 217410 Mm.491136 NM_144551 ENSMUSG00000020601 Trib2 AW319517|TRB-2|TRB2 tribbles pseudokinase 2 protein-coding common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086-4 chr3 97937160 97937601 + 0.440892966163086 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 7207 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-7 chr6 40325306 40325948 + 0.440892966163086 NA intron (NM_023538, intron 1 of 15) CpG 149 NM_023538 69923 Mm.32840 NM_023538 ENSMUSG00000029916 Agk 2610037M15Rik|6720408I04Rik|AI465370|Mulk acylglycerol kinase protein-coding unique_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086 chr1 33670054 33670669 + 0.440892966163086 NA promoter-TSS (NM_008922) promoter-TSS (NM_008922) 537 NR_033199 67503 Mm.87069 NM_026204 ENSMUSG00000103746 1700001G17Rik - RIKEN cDNA 1700001G17 gene ncRNA common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-9 chr6 15728208 15728904 + 0.440892966163086 NA intron (NM_175088, intron 2 of 4) intron (NM_175088, intron 2 of 4) 7895 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-4 chr18 24206227 24206584 + 0.440892966163086 NA intron (NM_001361200, intron 1 of 12) CpG 411 NM_001160404 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - polypeptide N-acetylgalactosaminyltransferase 1 protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-10 chr9 95857704 95858189 + 0.440892966163086 NA promoter-TSS (NR_073361) promoter-TSS (NR_073361) -64 NM_001271569 73410 Mm.443314 NM_028533 ENSMUSG00000096655 1700065D16Rik - RIKEN cDNA 1700065D16 gene protein-coding unique_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-3 chr6 113695754 113696658 + 0.440892966163086 NA promoter-TSS (NM_001033463) promoter-TSS (NM_001033463) -844 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-11 chrX 96119917 96120375 + 0.440892966163086 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 24101 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-4 chr9 21368068 21368733 + 0.440892966163086 NA promoter-TSS (NM_001277322) promoter-TSS (NM_001277322) -132 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086-7 chr9 77545074 77545484 + 0.440892966163086 NA promoter-TSS (NM_001146048) promoter-TSS (NM_001146048) -427 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-2 chr12 59011410 59011817 + 0.440892966163086 NA intron (NM_009147, intron 1 of 19) intron (NM_009147, intron 1 of 19) 404 NM_009147 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-7 chr6 88933722 88934471 + 0.440892966163086 NA Intergenic Intergenic 31845 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-3 chr12 77095164 77095754 + 0.440892966163086 NA Intergenic Intergenic -133211 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-3 chr5 143909236 143909696 + 0.440892966163086 NA promoter-TSS (NM_008886) promoter-TSS (NM_008886) 373 NM_001172146 231872 Mm.200499 NM_146165 ENSMUSG00000029610 Aimp2 AA407136|AA407225|Aimp2(p38)|Jtv1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-3 chr15 62322640 62323189 + 0.440892966163086 NA Intergenic Intergenic -103463 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-6 chr5 101765280 101765621 + 0.440892966163086 NA exon (NM_173370, exon 1 of 13) exon (NM_173370, exon 1 of 13) 320 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-7 chr6 124829634 124830008 + 0.440892966163086 NA promoter-TSS (NM_001326594) promoter-TSS (NM_001326594) -337 NM_013700 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-4 chr15 59555822 59556481 + 0.440892966163086 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -92503 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086-6 chr6 83455815 83456232 + 0.440892966163086 NA intron (NM_001347313, intron 1 of 11) CpG 369 NM_001347313 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-5 chr5 136619927 136620275 + 0.440892966163086 NA Intergenic Intergenic -52611 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086-2 chr12 17509895 17510132 + 0.440892966163086 NA Intergenic Intergenic -34860 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086 chr1 132266442 132267213 + 0.440892966163086 NA Intergenic Intergenic -31799 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-5 chr2 181592825 181593077 + 0.440892966163086 NA promoter-TSS (NM_001164597) promoter-TSS (NM_001164597) -490 NM_001164597 269401 Mm.386888 NM_001164597 ENSMUSG00000000823 Zfp512b Gm632|Znf512b zinc finger protein 512B protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-2 chr11 58979470 58979900 + 0.440892966163086 NA intron (NM_053168, intron 1 of 5) intron (NM_053168, intron 1 of 5) 1592 NM_053168 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-2 chr11 108365721 108366347 + 0.440892966163086 NA Intergenic Intergenic -22146 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-2 chr12 110978348 110978913 + 0.440892966163086 NA promoter-TSS (NM_001361917) promoter-TSS (NM_001361917) -12 NM_001361917 74251 Mm.250989 NM_175207 ENSMUSG00000037904 Ankrd9 2500003O20Rik ankyrin repeat domain 9 protein-coding unique_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-2 chr18 5413634 5414386 + 0.440892966163086 NA Intergenic Intergenic -79203 NM_001360447 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086 chr13 104459834 104460350 + 0.440892966163086 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 172257 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086 chr12 75978632 75979024 + 0.440892966163086 NA intron (NM_001005510, intron 51 of 115) intron (NM_001005510, intron 51 of 115) 69725 NR_039560 100628610 NR_039560 ENSMUSG00000092922 Mir5101 mmu-mir-5101|mu-mir-5101 microRNA 5101 ncRNA common_peak2_36_25_0.23052102291635_4.81570022959927_0.440892966163086 chr11 103133511 103133960 + 0.440892966163086 NA intron (NM_027658, intron 1 of 2) intron (NM_027658, intron 1 of 2) 376 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-4 chr2 69885106 69885552 + 0.440892966163086 NA exon (NM_029280, exon 1 of 7) exon (NM_029280, exon 1 of 7) 286 NM_029280 75422 Mm.10508 NM_029280 ENSMUSG00000051730 Mettl5 2810410A08Rik methyltransferase like 5 protein-coding common_peak2_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-10 chr6 35425588 35426231 + 0.440892966163086 NA Intergenic Intergenic 95063 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak1_29_31_-0.369467454800871_4.81526627259956_0.440892966163086-8 chr8 86885436 86886045 + 0.440892966163086 NA promoter-TSS (NM_030563) promoter-TSS (NM_030563) -482 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_37_25_0.268723736404056_4.83480158634312_0.440892966163086-7 chr5 150673854 150674324 + 0.440892966163086 NA intron (NM_175310, intron 1 of 34) CpG 262 NM_001346503 100710 Mm.32959 NM_175310 ENSMUSG00000034021 Pds5b AI646570|AS3|AW212954|Aprin|Tg(Wap-ERBB2)229Wzw|WAP-Her-2|mKIAA0979 PDS5 cohesin associated factor B protein-coding unique_peak1_36_25_0.23052102291635_4.81570022959927_0.440892966163086-3 chr8 11269030 11269735 + 0.440892966163086 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -43423 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_37_25_0.268723736404056_4.83480158634312_0.440892966163086-8 chr7 25708086 25708725 + 0.440892966163086 NA Intergenic Intergenic 10648 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_129_118_-0.16373264924544_6.81295143868522_0.440691497731765 chr1 91250336 91251440 + 0.440691497731765 NA intron (NM_001355764, intron 1 of 10) intron (NM_001355764, intron 1 of 10) 322 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-12 chr2 33217151 33217577 + 0.440610794044987 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 1403 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-12 chr6 47595491 47595842 + 0.440610794044987 NA promoter-TSS (NM_001146689) promoter-TSS (NM_001146689) -636 NM_007971 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-11 chr5 134957247 134957536 + 0.440610794044987 NA Intergenic Intergenic -10457 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-2 chr11 120823877 120824104 + 0.440610794044987 NA intron (NM_007988, intron 1 of 42) CpG 557 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding unique_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-4 chr8 46791981 46792429 + 0.440610794044987 NA intron (NR_152560, intron 1 of 7) intron (NR_152560, intron 1 of 7) 52460 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-6 chr2 15526601 15527035 + 0.440610794044987 NA exon (NM_001310455, exon 1 of 39) exon (NM_001310455, exon 1 of 39) 339 NM_001310455 102635496 NM_001310455 ENSMUSG00000075520 Malrd1 Diet1|Gm13318|Gm13364 MAM and LDL receptor class A domain containing 1 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-16 chr5 126538241 126538665 + 0.440610794044987 NA Intergenic Intergenic -492336 NR_040685 71247 Mm.399586 NR_040685 ENSMUSG00000105490 4933438B17Rik - RIKEN cDNA 4933438B17 gene ncRNA unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-2 chr11 87404647 87404927 + 0.440610794044987 NA promoter-TSS (NM_031386) promoter-TSS (NM_031386) 167 NM_001291440 114714 Mm.37376 NM_053269 ENSMUSG00000007646 Rad51c R51H3|Rad51l2 RAD51 paralog C protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-5 chr2 58709362 58709827 + 0.440610794044987 NA intron (NM_001289660, intron 1 of 7) intron (NM_001289660, intron 1 of 7) -45590 NM_001289659 76654 Mm.200370 NM_029692 ENSMUSG00000026839 Upp2 1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-6 chr11 74566252 74566465 + 0.440610794044987 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 23800 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-18 chr9 123213400 123213627 + 0.440610794044987 NA intron (NM_133974, intron 1 of 8) intron (NM_133974, intron 1 of 8) 2525 NM_133974 109332 Mm.27519 NM_133974 ENSMUSG00000035498 Cdcp1 9030022E12Rik|AA409659|E030027H19Rik CUB domain containing protein 1 protein-coding unique_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-5 chr3 65301868 65302193 + 0.440610794044987 NA intron (NM_001357358, intron 5 of 13) intron (NM_001357358, intron 5 of 13) 655 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-4 chr11 5788087 5788304 + 0.440610794044987 NA promoter-TSS (NM_001146308) promoter-TSS (NM_001146308) -288 NM_001146309 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-5 chr11 35976050 35976469 + 0.440610794044987 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 3830 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-7 chr2 181601416 181601680 + 0.440610794044987 NA intron (NM_133701, intron 1 of 20) intron (NM_133701, intron 1 of 20) 229 NM_133701 68879 Mm.292001 NM_133701 ENSMUSG00000002455 Prpf6 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K pre-mRNA splicing factor 6 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-10 chr5 31290664 31290985 + 0.440610794044987 NA intron (NM_026298, intron 1 of 47) intron (NM_026298, intron 1 of 47) 290 NM_026298 67661 Mm.293023 NM_026298 ENSMUSG00000038564 Ift172 4930553F24Rik|Slb|avc1|wim intraflagellar transport 172 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987 chr1 83090756 83091116 + 0.440610794044987 NA Intergenic Intergenic -25830 NM_016960 20297 Mm.116739 NM_016960 ENSMUSG00000026166 Ccl20 CKb4|LARC|MIP-3A|MIP-3[a]|MIP3A|ST38|Scya20|exodus-1 chemokine (C-C motif) ligand 20 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-7 chr11 116012362 116012575 + 0.440610794044987 NA intron (NM_016905, intron 1 of 7) CpG 251 NM_016905 14635 Mm.2820 NM_016905 ENSMUSG00000020766 Galk1 AA409894|GALK|Gk|Glk|Glk1 galactokinase 1 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-14 chr4 32055454 32055713 + 0.440610794044987 NA Intergenic Intergenic 91476 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-3 chr4 89504689 89505294 + 0.440610794044987 NA intron (NR_132431, intron 7 of 9) L1MC4a|LINE|L1 -183207 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-18 chr8 122151872 122152264 + 0.440610794044987 NA Intergenic L3|LINE|CR1 -130073 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987 chr1 45597260 45597537 + 0.440610794044987 NA Intergenic Intergenic -94116 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-11 chr5 96795381 96795797 + 0.440610794044987 NA intron (NM_013470, intron 1 of 12) B1_Mus1|SINE|Alu 2204 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding unique_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987 chr1 53313780 53314055 + 0.440610794044987 NA intron (NR_151661, intron 1 of 6) intron (NR_151661, intron 1 of 6) 293 NR_104360 72085 Mm.482256 NM_028091 ENSMUSG00000026096 Osgepl1 2610001M19Rik|AA416452 O-sialoglycoprotein endopeptidase-like 1 protein-coding unique_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-2 chr13 55190573 55190844 + 0.440610794044987 NA Intergenic Intergenic -19074 NM_008739 18193 Mm.168965 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-16 chr8 108749185 108749431 + 0.440610794044987 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 34664 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-10 chr19 41482180 41482412 + 0.440610794044987 NA Intergenic CpG -42956 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-8 chr5 13526830 13527551 + 0.440610794044987 NA intron (NM_001243073, intron 7 of 17) intron (NM_001243073, intron 7 of 17) 127881 NM_009152 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-3 chr10 108307618 108307994 + 0.440610794044987 NA Intergenic Intergenic -24383 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-6 chr15 98934103 98934319 + 0.440610794044987 NA intron (NM_011654, intron 1 of 3) CpG 179 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-11 chr6 118138891 118139147 + 0.440610794044987 NA promoter-TSS (NM_001362149) promoter-TSS (NM_001362149) 121 NM_030165 78752 Mm.300317 NM_030165 ENSMUSG00000042042 Csgalnact2 4632415D10Rik|Galnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-9 chr4 134853575 134853772 + 0.440610794044987 NA promoter-TSS (NM_001355501) promoter-TSS (NM_001355501) -328 NM_025382 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-7 chr4 137475799 137476322 + 0.440610794044987 NA intron (NM_008305, intron 1 of 96) MIRc|SINE|MIR 7257 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-10 chr3 122343279 122343999 + 0.440610794044987 NA Intergenic Intergenic -49936 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-13 chr8 14911813 14912069 + 0.440610794044987 NA intron (NM_001037736, intron 1 of 27) intron (NM_001037736, intron 1 of 27) 278 NM_001037736 234094 Mm.240298 NM_172751 ENSMUSG00000071176 Arhgef10 6430549H08Rik|mKIAA0294 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-4 chr16 57747076 57747636 + 0.440610794044987 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 7381 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-4 chr13 113794040 113794296 + 0.440610794044987 NA promoter-TSS (NM_172595) promoter-TSS (NM_172595) -340 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-5 chr15 59081089 59081483 + 0.440610794044987 NA intron (NM_144800, intron 1 of 14) CpG 740 NM_001146180 211401 Mm.215481 NM_144800 ENSMUSG00000022353 Mtss1 2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429 metastasis suppressor 1 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-2 chr10 76650733 76651003 + 0.440610794044987 NA Intergenic Intergenic -27238 NM_001347207 12834 Mm.1949 NM_146007 ENSMUSG00000020241 Col6a2 Col6a-2 collagen, type VI, alpha 2 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-7 chr16 57747524 57747982 + 0.440610794044987 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 6984 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-17 chr8 119429336 119429555 + 0.440610794044987 NA Intergenic Intergenic -7717 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-3 chr14 64440197 64440541 + 0.440610794044987 NA intron (NM_001253715, intron 1 of 4) intron (NM_001253715, intron 1 of 4) 657 NM_001253715 110265 Mm.26713 NM_026322 ENSMUSG00000054733 Msra 2310045J23Rik|6530413P12Rik|MSR-A methionine sulfoxide reductase A protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987 chr10 68281477 68281836 + 0.440610794044987 NA Intergenic Intergenic -2930 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-3 chr15 98531130 98531701 + 0.440610794044987 NA exon (NM_001289437, exon 4 of 10) exon (NM_001289437, exon 4 of 10) 2854 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding unique_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-3 chr18 32743781 32744304 + 0.440610794044987 NA intron (NR_045381, intron 2 of 4) intron (NR_045381, intron 2 of 4) -71341 NM_021367 53603 Mm.143716 NM_021367 ENSMUSG00000024379 Tslp - thymic stromal lymphopoietin protein-coding unique_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-2 chr2 30794784 30795183 + 0.440610794044987 NA TTS (NM_198000) TTS (NM_198000) 6754 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-9 chr19 4219055 4219263 + 0.440610794044987 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 4770 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-10 chr4 137498701 137498896 + 0.440610794044987 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 29995 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-2 chr9 110161866 110162322 + 0.440610794044987 NA intron (NM_009211, intron 7 of 27) intron (NM_009211, intron 7 of 27) 30070 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-3 chr11 121228908 121229218 + 0.440610794044987 NA promoter-TSS (NM_001254735) promoter-TSS (NM_001254735) -123 NM_001254735 217370 Mm.27182 NM_144832 ENSMUSG00000039294 BC017643 - cDNA sequence BC017643 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987 chr1 10955651 10956051 + 0.440610794044987 NA Intergenic B1_Mur1|SINE|Alu -37614 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-4 chr17 70994500 70994861 + 0.440610794044987 NA exon (NM_001357820, exon 4 of 4) exon (NM_001357820, exon 4 of 4) 3332 NM_001357820 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-10 chr2 35478846 35479242 + 0.440610794044987 NA Intergenic Intergenic -17595 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-8 chr8 70657937 70658181 + 0.440610794044987 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 1679 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-9 chr5 20882601 20883009 + 0.440610794044987 NA promoter-TSS (NM_172992) promoter-TSS (NM_172992) 352 NM_177601 212090 Mm.347525 NM_177601 ENSMUSG00000045435 Tmem60 BC027828 transmembrane protein 60 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-14 chr7 19342319 19342656 + 0.440610794044987 NA Intergenic Intergenic -2584 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987 chr1 153564823 153565261 + 0.440610794044987 NA Intergenic Intergenic -15328 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-2 chr11 86599762 86599960 + 0.440610794044987 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -15703 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-8 chr16 45365773 45366237 + 0.440610794044987 NA Intergenic B1F|SINE|Alu 43048 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-9 chr2 69647271 69647626 + 0.440610794044987 NA intron (NM_028284, intron 1 of 11) CpG 193 NM_028284 72569 Mm.252136 NM_028284 ENSMUSG00000063145 Bbs5 1700049I01Rik|2700023J09Rik Bardet-Biedl syndrome 5 (human) protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-19 chr9 96364630 96364943 + 0.440610794044987 NA promoter-TSS (NM_007502) promoter-TSS (NM_007502) -355 NM_001357212 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-17 chr9 57077211 57077631 + 0.440610794044987 NA intron (NM_001357754, intron 1 of 20) intron (NM_001357754, intron 1 of 20) 1045 NM_011378 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-13 chr2 102804340 102804901 + 0.440610794044987 NA Intergenic Intergenic -57860 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA unique_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987 chr15 90569891 90570376 + 0.440610794044987 NA intron (NM_001357979, intron 7 of 18) intron (NM_001357979, intron 7 of 18) 109255 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-5 chr19 6276120 6276383 + 0.440610794044987 NA promoter-TSS (NM_010119) promoter-TSS (NM_010119) -645 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-15 chr8 67726020 67726373 + 0.440610794044987 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 92099 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-7 chr16 18471831 18472159 + 0.440610794044987 NA intron (NM_001353143, intron 12 of 16) intron (NM_001353143, intron 12 of 16) -26718 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-9 chr9 50001328 50001657 + 0.440610794044987 NA Intergenic Intergenic -202099 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987 chr10 17351003 17351338 + 0.440610794044987 NA Intergenic Intergenic -255388 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987 chr11 43919198 43919519 + 0.440610794044987 NA Intergenic Intergenic -18121 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-7 chr3 60528054 60528284 + 0.440610794044987 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 26990 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-15 chr5 99126479 99126773 + 0.440610794044987 NA Intergenic Intergenic -89547 NM_008926 19092 Mm.263002 NM_008926 ENSMUSG00000029334 Prkg2 AW212535|CGKII|Prkgr2|cGK-II protein kinase, cGMP-dependent, type II protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-13 chr2 151908043 151908251 + 0.440610794044987 NA Intergenic Intergenic -3060 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-20 chrX 13037338 13037770 + 0.440610794044987 NA Intergenic Intergenic -4461 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-2 chr10 13008581 13008789 + 0.440610794044987 NA exon (NM_175102, exon 1 of 1) exon (NM_175102, exon 1 of 1) 235 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-4 chr19 46522226 46522777 + 0.440610794044987 NA Intergenic Intergenic 20853 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-12 chr7 106214903 106215238 + 0.440610794044987 NA intron (NM_001243039, intron 1 of 3).2 intron (NM_001243039, intron 1 of 3).2 267 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-3 chr15 93399239 93399466 + 0.440610794044987 NA 5' UTR (NM_001358749, exon 2 of 9) 5' UTR (NM_001358749, exon 2 of 9) 888 NM_001285863 223828 Mm.74208 NM_146062 ENSMUSG00000036167 Pphln1 CR|HSPC206|HSPC232 periphilin 1 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-11 chr2 60685926 60686349 + 0.440610794044987 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -12444 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-6 chrX 168672885 168673375 + 0.440610794044987 NA intron (NM_010832, intron 1 of 11) intron (NM_010832, intron 1 of 11) 772 NM_010832 17692 Mm.24248 NM_010832 ENSMUSG00000031358 Msl3 AU018931|Msl31|Msl3l1 MSL complex subunit 3 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-2 chr13 12395435 12395752 + 0.440610794044987 NA intron (NM_144835, intron 1 of 44) CpG 218 NM_144835 217995 Mm.171186 NM_144835 ENSMUSG00000050244 Heatr1 AA517551|B130016L12Rik|BC019693 HEAT repeat containing 1 protein-coding unique_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-4 chr19 46039060 46039455 + 0.440610794044987 NA 5' UTR (NM_010697, exon 1 of 11) 5' UTR (NM_010697, exon 1 of 11) 364 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-6 chr19 12002976 12003221 + 0.440610794044987 NA Intergenic Intergenic 33642 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-6 chr2 30700022 30700326 + 0.440610794044987 NA Intergenic Intergenic -21036 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-6 chr12 112861633 112861956 + 0.440610794044987 NA promoter-TSS (NM_019925) promoter-TSS (NM_019925) -878 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-12 chr2 84859714 84860041 + 0.440610794044987 NA intron (NM_001081349, intron 12 of 14) intron (NM_001081349, intron 12 of 14) 19251 NM_001083809 72401 Mm.22716 NM_024497 ENSMUSG00000027075 Slc43a1 2610016F07Rik|AA986141|Lat3|PB39|Pov1|R00504 solute carrier family 43, member 1 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-3 chr10 116260873 116261225 + 0.440610794044987 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -40325 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-14 chr2 125540837 125541279 + 0.440610794044987 NA Intergenic Intergenic -34620 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987 chr1 93174087 93174326 + 0.440610794044987 NA intron (NM_001310428, intron 1 of 31) intron (NM_001310428, intron 1 of 31) 5783 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-8 chr14 66257086 66257335 + 0.440610794044987 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 23842 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-15 chr4 97778752 97779185 + 0.440610794044987 NA intron (NM_010905, intron 1 of 10) intron (NM_010905, intron 1 of 10) 1342 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-5 chr14 29082565 29082901 + 0.440610794044987 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 64525 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-4 chr11 4271035 4271404 + 0.440610794044987 NA 3' UTR (NM_008501, exon 4 of 4) 3' UTR (NM_008501, exon 4 of 4) 4423 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-7 chr4 150909311 150909599 + 0.440610794044987 NA intron (NM_020569, intron 1 of 6) intron (NM_020569, intron 1 of 6) 466 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-8 chr4 155869052 155869324 + 0.440610794044987 NA promoter-TSS (NM_028020) promoter-TSS (NM_028020) 252 NM_024472 79554 Mm.25556 NM_024472 ENSMUSG00000029073 Cptp Gltpd1 ceramide-1-phosphate transfer protein protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-11 chr2 15054579 15054907 + 0.440610794044987 NA promoter-TSS (NM_029466) promoter-TSS (NM_029466) 129 NM_001165941 74455 Mm.478923 NM_028950 ENSMUSG00000026707 Nsun6 4933403D21Rik|4933414E04Rik|NOPD1 NOL1/NOP2/Sun domain family member 6 protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-6 chr2 109405883 109406349 + 0.440610794044987 NA Intergenic Intergenic 125378 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding unique_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-3 chr18 61105824 61106270 + 0.440610794044987 NA intron (NM_001037859, intron 2 of 21) intron (NM_001037859, intron 2 of 21) 475 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-13 chr6 125099231 125099642 + 0.440610794044987 NA intron (NM_001346610, intron 2 of 38) intron (NM_001346610, intron 2 of 38) 2412 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-9 chr17 80255132 80255672 + 0.440610794044987 NA intron (NM_198942, intron 13 of 22) intron (NM_198942, intron 13 of 22) 30951 NM_001355458 67242 Mm.279985 NM_026053 ENSMUSG00000055760 Gemin6 2610019B15Rik|2810470M17Rik gem nuclear organelle associated protein 6 protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-16 chr7 49476760 49477078 + 0.440610794044987 NA intron (NM_175272, intron 10 of 37) intron (NM_175272, intron 10 of 37) 159916 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-5 chr19 59843091 59843718 + 0.440610794044987 NA Intergenic Intergenic 99960 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_26_17_0.309676829031091_4.32476341595786_0.440610794044987-5 chr11 53352431 53352878 + 0.440610794044987 NA intron (NM_033565, intron 1 of 20) intron (NM_033565, intron 1 of 20) 1887 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding unique_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987 chr14 7866964 7867201 + 0.440610794044987 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 49125 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-17 chr8 108907362 108907733 + 0.440610794044987 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -29313 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA unique_peak1_26_17_0.309676829031091_4.32476341595786_0.440610794044987-5 chrX 101332177 101332486 + 0.440610794044987 NA Intergenic Intergenic 33152 NM_172932 245537 Mm.121508 NM_172932 ENSMUSG00000031302 Nlgn3 A230085M13Rik|HNL3|NL3|NLG3 neuroligin 3 protein-coding common_peak2_19_22_-0.473865013085339_4.28662944951434_0.440610794044987-8 chr18 54986223 54986558 + 0.440610794044987 NA intron (NM_175751, intron 2 of 9) intron (NM_175751, intron 2 of 9) 3790 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-4 chr14 66264605 66264903 + 0.440610794044987 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 16298 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-2 chr11 3330992 3331313 + 0.440610794044987 NA intron (NM_178149, intron 1 of 5) intron (NM_178149, intron 1 of 5) 421 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-14 chr9 108978262 108978503 + 0.440610794044987 NA exon (NM_007738, exon 99 of 118) exon (NM_007738, exon 99 of 118) -7781 NM_145077 171530 Mm.388865 NM_145077 ENSMUSG00000049699 Ucn2 Ucn II|Ucn-2|ucn-II urocortin 2 protein-coding unique_peak2_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-2 chr16 25531486 25532037 + 0.440610794044987 NA Intergenic Intergenic -152004 NM_001127259 22061 Mm.20894 NM_011641 ENSMUSG00000022510 Trp63 AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1 transformation related protein 63 protein-coding common_peak1_20_22_-0.403972280464389_4.32157581582482_0.440610794044987-8 chr3 96904876 96905123 + 0.440610794044987 NA intron (NM_026229, intron 1 of 13) CpG 299 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding common_peak1_478_366_0.0796888508594904_8.55948067827296_0.440438725402692 chr15 53342807 53345955 + 0.440438725402692 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 1802 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_101_73_0.174158114361711_6.29653242280981_0.440322431956433 chr6 142387282 142388019 + 0.440322431956433 NA promoter-TSS (NM_001204907) promoter-TSS (NM_001204907) 407 NM_025872 66964 Mm.3676 NM_025872 ENSMUSG00000030245 Golt1b 2310061A22Rik|AA407874|AU024291|CGI-141 golgi transport 1B protein-coding common_peak1_88_83_-0.204010196378833_6.29031232458934_0.440322431956433 chr9 70679038 70679813 + 0.440322431956433 NA intron (NM_007399, intron 1 of 15) CpG 443 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak2_101_73_0.174158114361711_6.29653242280981_0.440322431956433 chr5 137078863 137079866 + 0.440322431956433 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -7092 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_100_73_0.160044533628463_6.28947563244318_0.440322431956433 chr13 14613290 14613884 + 0.440322431956433 NA promoter-TSS (NM_029271) promoter-TSS (NM_029271) 345 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding common_peak1_224_168_0.116035650751789_7.45889726165808_0.44026934483067 chr6 113306869 113308253 + 0.44026934483067 NA 5' UTR (NM_001282126, exon 1 of 13) 5' UTR (NM_001282126, exon 1 of 13) 424 NM_001282126 78783 Mm.356059 NM_030178 ENSMUSG00000001632 Brpf1 4833438B11Rik|4930540D11Rik|Brpf2 bromodomain and PHD finger containing, 1 protein-coding common_peak1_65_46_0.205422153146877_5.65729992825108_0.440152849854807-2 chr12 33147802 33148609 + 0.440152849854807 NA promoter-TSS (NR_015602) promoter-TSS (NR_015602) 519 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_65_46_0.205422153146877_5.65729992825108_0.440152849854807 chr10 120635633 120636201 + 0.440152849854807 NA Intergenic Intergenic -129815 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_55_54_-0.25671559930598_5.65300191387167_0.440152849854807-3 chr17 46646236 46646719 + 0.440152849854807 NA promoter-TSS (NM_029091) promoter-TSS (NM_029091) 248 NM_025302 27398 Mm.391007 NM_025302 ENSMUSG00000002767 Mrpl2 CGI-22|L2mt|MRP-L14|MRP-L2|Rpml14 mitochondrial ribosomal protein L2 protein-coding common_peak1_55_54_-0.25671559930598_5.65300191387167_0.440152849854807 chr5 112326013 112326662 + 0.440152849854807 NA promoter-TSS (NM_018783) promoter-TSS (NM_018783) -32 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak2_55_54_-0.25671559930598_5.65300191387167_0.440152849854807-2 chr12 99337045 99337534 + 0.440152849854807 NA intron (NM_183186, intron 3 of 5) intron (NM_183186, intron 3 of 5) 112785 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_65_46_0.205422153146877_5.65729992825108_0.440152849854807-4 chr18 67205437 67206274 + 0.440152849854807 NA exon (NM_024190, exon 1 of 1) exon (NM_024190, exon 1 of 1) 496 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak2_55_54_-0.25671559930598_5.65300191387167_0.440152849854807 chr11 6414932 6415631 + 0.440152849854807 NA promoter-TSS (NM_008907) promoter-TSS (NM_008907) -589 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak1_65_46_0.205422153146877_5.65729992825108_0.440152849854807-3 chr17 64600880 64601840 + 0.440152849854807 NA promoter-TSS (NM_008549) promoter-TSS (NM_008549) -289 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding common_peak1_65_46_0.205422153146877_5.65729992825108_0.440152849854807 chr12 31634144 31635000 + 0.440152849854807 NA promoter-TSS (NM_001164090) promoter-TSS (NM_001164090) 25 NM_007530 12033 Mm.242379 NM_007530 ENSMUSG00000020650 Bcap29 AW208404|Bap29 B cell receptor associated protein 29 protein-coding common_peak2_121_89_0.148247993399957_6.56597709302965_0.440128778810489-3 chr8 121241874 121242701 + 0.440128778810489 NA Intergenic Intergenic 114602 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_121_89_0.148247993399957_6.56597709302965_0.440128778810489 chr11 119299345 119300499 + 0.440128778810489 NA exon (NM_138669, exon 1 of 12) exon (NM_138669, exon 1 of 12) 121 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak2_121_89_0.148247993399957_6.56597709302965_0.440128778810489-2 chr7 19561697 19562705 + 0.440128778810489 NA 5' UTR (NM_199149, exon 1 of 13) 5' UTR (NM_199149, exon 1 of 13) 197 NM_199149 232947 Mm.219662 NM_199149 ENSMUSG00000051403 Ppp1r37 Gm158|Lrrc68 protein phosphatase 1, regulatory subunit 37 protein-coding common_peak2_108_100_-0.179516597623349_6.56845318394012_0.440128778810489 chr3 75956095 75957014 + 0.440128778810489 NA 5' UTR (NM_175193, exon 1 of 15) 5' UTR (NM_175193, exon 1 of 15) 395 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711-3 chr16 30964635 30965706 + 0.439641634493711 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 116262 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711-4 chr17 80206363 80207278 + 0.439641634493711 NA intron (NM_001360435, intron 1 of 6) CpG 485 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711 chr11 103094751 103095487 + 0.439641634493711 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 6539 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711-5 chr2 74697989 74698797 + 0.439641634493711 NA exon (NM_013555, exon 1 of 2) exon (NM_013555, exon 1 of 2) 630 NM_013555 15438 Mm.26544 NM_013555 ENSMUSG00000043342 Hoxd9 Hox-4.4|Hox-5.2 homeobox D9 protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711-6 chr4 135254353 135255296 + 0.439641634493711 NA intron (NM_013885, intron 1 of 5) intron (NM_013885, intron 1 of 5) 17936 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711-7 chr5 137103394 137104110 + 0.439641634493711 NA Intergenic RSINE1|SINE|B4 12455 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_71_68_-0.223868187678709_5.99659036293881_0.439641634493711-2 chr13 60018789 60019748 + 0.439641634493711 NA Intergenic Intergenic -10443 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_82_59_0.181433025282399_5.99760710824972_0.439641634493699-4 chr7 84409498 84410407 + 0.439641634493699 NA promoter-TSS (NM_007488) promoter-TSS (NM_007488) 86 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_82_59_0.181433025282399_5.99760710824972_0.439641634493699-5 chr7 133123594 133124649 + 0.439641634493699 NA promoter-TSS (NM_009980) promoter-TSS (NM_009980) -638 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_82_59_0.181433025282399_5.99760710824972_0.439641634493699 chr6 72615741 72616702 + 0.439641634493699 NA exon (NM_009444, exon 2 of 4) exon (NM_009444, exon 2 of 4) 527 NM_009444 22135 Mm.246563 NM_009444 Tgoln2 TGN38B|TGN41|TGN46|Ttgn2 trans-golgi network protein 2 protein-coding common_peak1_82_59_0.181433025282399_5.99760710824972_0.439641634493699-3 chr5 111204104 111204974 + 0.439641634493699 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -126158 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_82_59_0.181433025282399_5.99760710824972_0.439641634493699-2 chr16 30510681 30511501 + 0.439641634493699 NA TTS (NM_172614) TTS (NM_172614) 39487 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak1_82_59_0.181433025282399_5.99760710824972_0.439641634493699 chr15 79435486 79436641 + 0.439641634493699 NA intron (NM_001359863, intron 2 of 10) intron (NM_001359863, intron 2 of 10) 5755 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak1_145_107_0.142472953829214_6.82612397907808_0.439454386439659 chr3 57302936 57304351 + 0.439454386439659 NA Intergenic Intergenic -1655 NM_001355130 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_130_119_-0.164828287166128_6.82447645202545_0.439454386439659 chr2 130839144 130840547 + 0.439454386439659 NA promoter-TSS (NM_001311147) promoter-TSS (NM_001311147) -158 NM_001311147 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding common_peak2_42_42_-0.280022224492666_5.28625364245577_0.439405572480898-4 chr8 36657092 36657876 + 0.439405572480898 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -43541 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_42_42_-0.280022224492666_5.28625364245577_0.439405572480898-2 chr16 62642512 62643064 + 0.439405572480898 NA Intergenic Intergenic 143928 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak2_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-4 chr3 144669764 144670311 + 0.439405572480898 NA Intergenic Intergenic 50298 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-3 chr18 64516090 64516502 + 0.439405572480898 NA intron (NM_001142950, intron 1 of 14) CpG 261 NM_027350 70223 Mm.29192 NM_027350 ENSMUSG00000024587 Nars 3010001M15Rik|AA960128|ASNRS|C78150 asparaginyl-tRNA synthetase protein-coding common_peak1_41_42_-0.313730058682718_5.26939972536074_0.439405572480898 chr11 104468695 104469309 + 0.439405572480898 NA promoter-TSS (NM_001359634) promoter-TSS (NM_001359634) -141 NM_001359634 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_42_42_-0.280022224492666_5.28625364245577_0.439405572480898 chr12 108496042 108496544 + 0.439405572480898 NA intron (NM_001043335, intron 4 of 21) intron (NM_001043335, intron 4 of 21) -58427 NM_001163394 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774|b2b2600Clo Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-2 chr12 80112129 80112742 + 0.439405572480898 NA intron (NM_007564, intron 1 of 1) intron (NM_007564, intron 1 of 1) 578 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-4 chr19 44069068 44069748 + 0.439405572480898 NA 5' UTR (NM_145502, exon 1 of 11) 5' UTR (NM_145502, exon 1 of 11) 278 NM_145502 226144 Mm.279865 NM_145502 ENSMUSG00000025198 Erlin1 2810439N09Rik|C80197|Keo4|Spfh1 ER lipid raft associated 1 protein-coding common_peak2_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-3 chr2 29060327 29060761 + 0.439405572480898 NA intron (NM_009442, intron 1 of 11) CpG 281 NM_009442 22130 Mm.252195 NM_009442 ENSMUSG00000026803 Ttf1 AV245725|TTF-1|TTF-I transcription termination factor, RNA polymerase I protein-coding common_peak2_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-2 chr19 37907000 37907742 + 0.439405572480898 NA intron (NM_001302140, intron 49 of 53) intron (NM_001302140, intron 49 of 53) 136206 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_42_42_-0.280022224492666_5.28625364245577_0.439405572480898-3 chr7 143784312 143784721 + 0.439405572480898 NA promoter-TSS (NM_175534) promoter-TSS (NM_175534) -16 NM_175534 244238 Mm.183561 NM_175534 ENSMUSG00000048965 Mrgpre C130069N09Rik|Ebrt3|Mgrf|MrgE MAS-related GPR, member E protein-coding common_peak2_42_42_-0.280022224492666_5.28625364245577_0.439405572480898 chr11 8425035 8425713 + 0.439405572480898 NA Intergenic Intergenic 239161 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_41_42_-0.313730058682718_5.26939972536074_0.439405572480898 chr13 49341615 49342148 + 0.439405572480898 NA exon (NM_029791, exon 1 of 8) exon (NM_029791, exon 1 of 8) 332 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - BICD cargo adaptor 2 protein-coding common_peak2_42_42_-0.280022224492666_5.28625364245577_0.439405572480898-2 chr19 6907921 6908588 + 0.439405572480898 NA intron (NM_012021, intron 1 of 5) intron (NM_012021, intron 1 of 5) -1444 NM_001166370 67674 Mm.318804 NM_026306 ENSMUSG00000038812 Trmt112 0610038D11Rik|Trm112p tRNA methyltransferase 11-2 protein-coding common_peak2_41_42_-0.313730058682718_5.26939972536074_0.439405572480898-5 chr6 120038048 120038616 + 0.439405572480898 NA 5' UTR (NM_001199083, exon 1 of 28) 5' UTR (NM_001199083, exon 1 of 28) 323 NM_001185020 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-4 chr17 43016644 43017117 + 0.439405572480892 NA 5' UTR (NM_178589, exon 1 of 6) 5' UTR (NM_178589, exon 1 of 6) 325 NM_178589 94185 Mm.200792 NM_178589 ENSMUSG00000023915 Tnfrsf21 AA959878|DR6|R74815|TR7 tumor necrosis factor receptor superfamily, member 21 protein-coding unique_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892 chr17 16343699 16344747 + 0.439405572480892 NA Intergenic Intergenic -517637 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-7 chr4 139534092 139534808 + 0.439405572480892 NA intron (NM_183148, intron 3 of 11) intron (NM_183148, intron 3 of 11) 3902 NM_183148 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-3 chr11 115829704 115830450 + 0.439405572480892 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 6019 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-5 chr4 89351057 89351601 + 0.439405572480892 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -40297 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-6 chr3 126046386 126047108 + 0.439405572480892 NA Intergenic Intergenic -108095 NR_149311 22239 Mm.306021 NM_011674 ENSMUSG00000032854 Ugt8a AI850488|AW455908|Cgt|Ugt8|mCerGT UDP galactosyltransferase 8A protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-2 chr10 128302598 128303121 + 0.439405572480892 NA promoter-TSS (NM_001252327) promoter-TSS (NM_001252327) -476 NM_133992 103135 Mm.244183 NM_133992 ENSMUSG00000005682 Pan2 1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710 PAN2 poly(A) specific ribonuclease subunit protein-coding unique_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-2 chr2 119594396 119594895 + 0.439405572480892 NA intron (NR_027832, intron 1 of 2) CpG 349 NR_015473 66602 Mm.379181 NR_015473 ENSMUSG00000085438 1700020I14Rik 1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano RIKEN cDNA 1700020I14 gene ncRNA common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-2 chr15 89211615 89211890 + 0.439405572480892 NA 5' UTR (NM_027805, exon 1 of 8) 5' UTR (NM_027805, exon 1 of 8) 193 NM_027805 71474 Mm.184055 NM_026813 ENSMUSG00000036561 Ppp6r2 1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2 protein phosphatase 6, regulatory subunit 2 protein-coding common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-6 chr4 130036426 130037055 + 0.439405572480892 NA Intergenic Intergenic -11100 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-8 chr7 142533133 142533642 + 0.439405572480892 NA intron (NM_011288, intron 1 of 4) intron (NM_011288, intron 1 of 4) 270 NM_011288 19935 Mm.12144 NM_011288 ENSMUSG00000037772 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 protein-coding common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892 chr13 54503798 54504413 + 0.439405572480892 NA intron (NM_176987, intron 1 of 9) CpG 300 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-7 chr7 24082008 24082508 + 0.439405572480892 NA intron (NM_001289637, intron 1 of 3) CpG 361 NM_001289637 210135 Mm.32254 NM_172483 ENSMUSG00000057101 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 protein-coding common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-4 chr3 97658305 97658857 + 0.439405572480892 NA intron (NM_182997, intron 1 of 7) CpG 369 NM_182997 108097 Mm.31175 NM_182997 ENSMUSG00000038205 Prkab2 5730553K21Rik|AW049591|BB124140 protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding common_peak1_50_35_0.220741458121594_5.28029573050311_0.439405572480892-3 chr2 152696372 152697212 + 0.439405572480892 NA intron (NM_010376, intron 10 of 11) intron (NM_010376, intron 10 of 11) 9644 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892-5 chr17 74489587 74490273 + 0.439405572480892 NA intron (NM_026417, intron 1 of 5) CpG 437 NM_026417 67864 Mm.41891 NM_026417 ENSMUSG00000024072 Yipf4 2310034L04Rik Yip1 domain family, member 4 protein-coding common_peak2_50_35_0.220741458121594_5.28029573050311_0.439405572480892 chr1 191025607 191026127 + 0.439405572480892 NA non-coding (NR_027298, exon 1 of 2) non-coding (NR_027298, exon 1 of 2) 323 NM_001313747 226844 Mm.134053 NM_198025 ENSMUSG00000066595 Flvcr1 9630055N22Rik|FLVCR|Mfsd7b feline leukemia virus subgroup C cellular receptor 1 protein-coding common_peak2_454_391_-0.0890206600518191_8.5701995140893_0.439337821365163 chr6 42350032 42353953 + 0.439337821365163 NA intron (NM_001289618, intron 4 of 9) intron (NM_001289618, intron 4 of 9) 2164 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_336_293_-0.104045476359573_8.14764960665658_0.439310121403746 chr3 41194089 41196848 + 0.439310121403746 NA Intergenic Intergenic -112422 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_109_101_-0.180648020193801_6.5821013318746_0.438670624754528 chr4 89049115 89050548 + 0.438670624754528 NA promoter-TSS (NR_033533) promoter-TSS (NR_033533) -476 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak2_109_101_-0.180648020193801_6.5821013318746_0.438670624754528-2 chr4 133129849 133131552 + 0.438670624754528 NA promoter-TSS (NM_153423) promoter-TSS (NM_153423) 67 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_109_101_-0.180648020193801_6.5821013318746_0.438670624754528 chr11 3348188 3349546 + 0.438670624754528 NA intron (NM_001034030, intron 7 of 11) intron (NM_001034030, intron 7 of 11) 7274 NM_001034030 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak1_122_90_0.144000529629197_6.57979490501329_0.438670624754503-3 chr7 97081736 97082659 + 0.438670624754503 NA intron (NM_001162477, intron 1 of 9) CpG 446 NM_010248 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_122_90_0.144000529629197_6.57979490501329_0.438670624754503-4 chr8 126873014 126874879 + 0.438670624754503 NA Intergenic Intergenic 24926 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_122_90_0.144000529629197_6.57979490501329_0.438670624754503 chr11 84868748 84869997 + 0.438670624754503 NA promoter-TSS (NR_131201) promoter-TSS (NR_131201) -633 NR_131201 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA common_peak1_122_90_0.144000529629197_6.57979490501329_0.438670624754503-2 chr11 118160992 118162165 + 0.438670624754503 NA Intergenic Intergenic -32359 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_122_90_0.144000529629197_6.57979490501329_0.438670624754503 chr8 122475222 122476496 + 0.438670624754503 NA promoter-TSS (NM_153775) promoter-TSS (NM_153775) 205 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak1_257_194_0.105637859540788_7.66014924352_0.438664239814691 chr3 138142371 138145005 + 0.438664239814691 NA promoter-TSS (NM_001163457) promoter-TSS (NM_001163457) -111 NM_001348197 108943 Mm.471692 NM_175389 ENSMUSG00000004127 Trmt10a 3110023L08Rik|AA794508|Rg9mtd2|Rnmtd2 tRNA methyltransferase 10A protein-coding common_peak1_238_210_-0.117712872156892_7.66224275262874_0.438664239814691 chr10 20311163 20313208 + 0.438664239814691 NA promoter-TSS (NM_153787) promoter-TSS (NM_153787) -284 NM_001025392 72567 Mm.294783 NM_153787 ENSMUSG00000037608 Bclaf1 2610102K23Rik|2700025J07Rik|2810454G14Rik|5730534O06Rik|AI450190|AW556225|Btf|mKIAA0164 BCL2-associated transcription factor 1 protein-coding common_peak1_102_74_0.168768674562346_6.31320302777705_0.43855686106456 chr11 97415306 97416406 + 0.43855686106456 NA Intergenic CpG -34304 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_89_84_-0.205077768284363_6.30685205199552_0.43855686106456 chr11 80383362 80384115 + 0.43855686106456 NA intron (NR_045038, intron 1 of 16) intron (NR_045038, intron 1 of 16) 459 NM_001130171 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding common_peak2_89_84_-0.205077768284363_6.30685205199552_0.43855686106456 chr19 4305013 4306043 + 0.43855686106456 NA intron (NM_130863, intron 1 of 21) intron (NM_130863, intron 1 of 21) 694 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_180_162_-0.143533564172951_7.2769613721446_0.438369797233405 chr8 111643077 111644319 + 0.438369797233405 NA intron (NM_001358993, intron 1 of 3) CpG 255 NM_011742 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak1_458_394_-0.087481138192139_8.5819682739684_0.438254171041239 chr9 41579642 41584486 + 0.438254171041239 NA TTS (NR_029822) TTS (NR_029822) 138 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_146_108_0.138954441243339_6.8376615453986_0.438239009253705 chr9 25251440 25252322 + 0.438239009253705 NA promoter-TSS (NM_001205367) promoter-TSS (NM_001205367) -110 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_72_69_-0.22486758137904_6.01684922625545_0.437489091603667 chr19 47137845 47138588 + 0.437489091603667 NA promoter-TSS (NM_133746) promoter-TSS (NM_133746) 78 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak1_72_69_-0.22486758137904_6.01684922625545_0.437489091603667-2 chr5 136478355 136479309 + 0.437489091603667 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 87149 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_72_69_-0.22486758137904_6.01684922625545_0.437489091603667 chr6 82753321 82753987 + 0.437489091603667 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 20800 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_72_69_-0.22486758137904_6.01684922625545_0.437489091603667-2 chrX 73475552 73476590 + 0.437489091603667 NA Intergenic Intergenic -7530 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak2_66_47_0.196590516919231_5.68325775918077_0.437419278836636 chr8 121651210 121652241 + 0.437419278836636 NA exon (NM_080855, exon 1 of 13) exon (NM_080855, exon 1 of 13) 208 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636-3 chr17 25541007 25541863 + 0.437419278836636 NA Intergenic B1F|SINE|Alu 22846 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA common_peak1_56_55_-0.257355865285002_5.6786769894151_0.437419278836636-3 chr4 145240648 145241397 + 0.437419278836636 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 5848 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636-2 chr1 91458591 91459258 + 0.437419278836636 NA intron (NM_011066, intron 1 of 22) MIRb|SINE|MIR 404 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636-5 chr4 98923621 98924051 + 0.437419278836636 NA promoter-TSS (NM_146144) promoter-TSS (NM_146144) 26 NM_001356424 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding common_peak1_56_55_-0.257355865285002_5.6786769894151_0.437419278836636 chr15 98985253 98985745 + 0.437419278836636 NA promoter-TSS (NR_045991) promoter-TSS (NR_045991) -466 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636-4 chr3 145938094 145938681 + 0.437419278836636 NA intron (NM_025555, intron 1 of 2) CpG 373 NR_151446 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak2_56_55_-0.257355865285002_5.6786769894151_0.437419278836636-2 chr9 109081932 109082620 + 0.437419278836636 NA promoter-TSS (NM_025689) promoter-TSS (NM_025689) 105 NM_183250 66167 Mm.2395 NM_183250 ENSMUSG00000091537 Tma7 1110017O22Rik|Ccdc72 translational machinery associated 7 protein-coding common_peak2_56_55_-0.257355865285002_5.6786769894151_0.437419278836636 chr4 145240646 145241521 + 0.437419278836636 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 5787 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_56_55_-0.257355865285002_5.6786769894151_0.437419278836636-2 chr2 83644542 83645044 + 0.437419278836636 NA intron (NM_026934, intron 1 of 9) CpG 215 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636-6 chr6 145863789 145864649 + 0.437419278836636 NA exon (NM_024469, exon 4 of 5) exon (NM_024469, exon 4 of 5) 1201 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_56_55_-0.257355865285002_5.6786769894151_0.437419278836636-4 chr6 145211236 145211892 + 0.437419278836636 NA promoter-TSS (NM_177222) promoter-TSS (NM_177222) 417 NM_001362057 67636 Mm.486359 NM_133688 ENSMUSG00000040370 Etfrf1 4930469P12Rik|AL022899|Ghiso|Lyrm5 electron transfer flavoprotein regulatory factor 1 protein-coding common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636 chr1 13588924 13589872 + 0.437419278836636 NA intron (NM_028173, intron 1 of 10) CpG 512 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak1_66_47_0.196590516919231_5.68325775918077_0.437419278836636-7 chr9 122293675 122294421 + 0.437419278836636 NA intron (NM_001271873, intron 1 of 12) CpG 375 NM_001271873 102566 Mm.87676 NM_133979 ENSMUSG00000037949 Ano10 AI604832|Tmem16k anoctamin 10 protein-coding common_peak2_306_267_-0.104023292943113_8.01407754398621_0.437405929817041 chr8 70475419 70476902 + 0.437405929817041 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 783 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_110_102_-0.181759163471566_6.59562094544744_0.437242741247067 chr13 98814223 98815171 + 0.437242741247067 NA intron (NM_172591, intron 1 of 25) CpG 752 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_210_187_-0.129701897519001_7.48973790291814_0.437164689840395 chr18 63691475 63693106 + 0.437164689840395 NA promoter-TSS (NM_016792) promoter-TSS (NM_016792) 69 NM_016792 53382 Mm.19169 NM_016792 ENSMUSG00000024583 Txnl1 32kDa|TRP32|Txnl thioredoxin-like 1 protein-coding common_peak2_133_121_-0.156239299495743_6.85261768781502_0.437044798151685 chr8 70873215 70873838 + 0.437044798151685 NA promoter-TSS (NM_026964) promoter-TSS (NM_026964) -36 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak1_147_109_0.135491068386294_6.84910524771781_0.437044798151685 chr9 45983881 45985416 + 0.437044798151685 NA promoter-TSS (NM_001357239) promoter-TSS (NM_001357239) 223 NM_001357246 18475 Mm.200859 NM_008775 ENSMUSG00000003131 Pafah1b2 2610005M20Rik|AI747451|AU021353|Pafahb|mus[b] platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 protein-coding common_peak1_132_121_-0.166969813016854_6.84725243105446_0.437044798151685 chr17 24072251 24073468 + 0.437044798151685 NA TTS (NM_011062) TTS (NM_011062) 626 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding common_peak2_91_85_-0.190466432479087_6.33103153846255_0.436835517045436 chr6 88934664 88935713 + 0.436835517045436 NA Intergenic Intergenic 32937 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_295_223_0.102440880280104_7.85857536219766_0.436601617300378 chr6 31106913 31109609 + 0.436601617300378 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -45168 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_157_142_-0.149358650076357_7.08519201174021_0.436498524636116 chr19 28181862 28183213 + 0.436498524636116 NA Intergenic Intergenic -171371 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_157_142_-0.149358650076357_7.08519201174021_0.436498524636116-2 chr19 36118860 36119902 + 0.436498524636116 NA exon (NM_013468, exon 2 of 9) exon (NM_013468, exon 2 of 9) 463 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_173_129_0.126325831003023_7.08553072852997_0.436498524636116 chr8 54610874 54612000 + 0.436498524636116 NA Intergenic Intergenic 10656 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak1_157_142_-0.149358650076357_7.08519201174021_0.436498524636116 chr2 151542049 151543503 + 0.436498524636116 NA intron (NM_001355078, intron 1 of 5) CpG 293 NM_001302078 14225 Mm.278458 NM_008019 ENSMUSG00000032966 Fkbp1a FKBP12|Fkbp|Fkbp1 FK506 binding protein 1a protein-coding unique_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795 chrX 94234221 94234802 + 0.436052471002795 NA promoter-TSS (NM_153165) promoter-TSS (NM_153165) -419 NM_001039059 236904 Mm.115533 NM_153165 ENSMUSG00000043929 Klhl15 6330500C13Rik kelch-like 15 protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-6 chr7 112696518 112697061 + 0.436052471002795 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 17469 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-6 chr19 41935511 41935974 + 0.436052471002795 NA intron (NM_001360676, intron 2 of 11) intron (NM_001360676, intron 2 of 11) 2297 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-3 chr4 57798006 57798562 + 0.436052471002795 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -46964 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795 chr13 24397443 24397767 + 0.436052471002795 NA intron (NM_001111110, intron 2 of 16) intron (NM_001111110, intron 2 of 16) -17517 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795 chr10 89530639 89531279 + 0.436052471002795 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 2663 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-7 chr6 145967931 145968319 + 0.436052471002795 NA Intergenic Intergenic 34003 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-4 chr4 149307979 149308330 + 0.436052471002795 NA promoter-TSS (NM_001290995) promoter-TSS (NM_001290995) -421 NM_001290995 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-7 chr4 103114443 103114647 + 0.436052471002795 NA promoter-TSS (NM_146254) promoter-TSS (NM_146254) 155 NM_001286222 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-4 chr19 30923771 30924197 + 0.436052471002795 NA intron (NM_001013833, intron 4 of 17) intron (NM_001013833, intron 4 of 17) 6978 NR_033643 625995 Mm.454508 NR_033643 Gm6642 EG625995 ubiquitin-like 5 pseudogene pseudo common_peak1_30_32_-0.366889600232427_4.86094931924224_0.436052471002795 chr1 40232941 40233505 + 0.436052471002795 NA intron (NM_008362, intron 1 of 10) intron (NM_008362, intron 1 of 10) 8143 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-9 chr5 146794217 146794685 + 0.436052471002795 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 505 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795 chr11 16812116 16812722 + 0.436052471002795 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 60216 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-5 chr18 61726472 61726970 + 0.436052471002795 NA promoter-TSS (NM_021296) promoter-TSS (NM_021296) 331 NR_029432 68982 Mm.441992 NR_029432 ENSMUSG00000098702 1500015A07Rik - RIKEN cDNA 1500015A07 gene ncRNA unique_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-2 chr2 93822024 93822561 + 0.436052471002795 NA intron (NM_001355075, intron 1 of 14) intron (NM_001355075, intron 1 of 14) 276 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-5 chr4 155174661 155175204 + 0.436052471002795 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 47603 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-3 chr17 81064388 81064919 + 0.436052471002795 NA intron (NM_028138, intron 1 of 9) intron (NM_028138, intron 1 of 9) 432 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-2 chr2 131722333 131723006 + 0.436052471002795 NA Intergenic Intergenic 124987 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA common_peak1_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-2 chr8 46616559 46617196 + 0.436052471002795 NA promoter-TSS (NM_009810) promoter-TSS (NM_009810) 350 NM_001001184 408022 Mm.217385 NM_001001184 ENSMUSG00000038225 Primpol BC065112|Ccdc111 primase and polymerase (DNA-directed) protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795-6 chr5 148954715 148955167 + 0.436052471002795 NA Intergenic Intergenic 4691 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-2 chr11 118354710 118355148 + 0.436052471002795 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) 482 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-7 chr9 111270989 111271508 + 0.436052471002795 NA promoter-TSS (NM_175266) promoter-TSS (NM_175266) 360 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-2 chr11 55032925 55033382 + 0.436052471002795 NA intron (NR_138556, intron 1 of 24) intron (NR_138556, intron 1 of 24) 318 NR_138556 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795 chr1 155416785 155417302 + 0.436052471002795 NA intron (NM_011273, intron 1 of 14) CpG 401 NM_011273 19775 Mm.266215 NM_011273 ENSMUSG00000026469 Xpr1 Rmc-1|Rmc1|Sxv|Syg1|XR xenotropic and polytropic retrovirus receptor 1 protein-coding common_peak1_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-5 chr3 65666053 65666459 + 0.436052471002795 NA promoter-TSS (NM_001166659) promoter-TSS (NM_001166659) 28 NM_001166659 624866 Mm.296317 NM_001037923 ENSMUSG00000074579 Lekr1 EG546798|EG624866|Gm6534 leucine, glutamate and lysine rich 1 protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-8 chr5 30850479 30850741 + 0.436052471002795 NA intron (NM_133350, intron 1 of 6) intron (NM_133350, intron 1 of 6) -11197 NM_001310516 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-4 chr18 34860117 34860620 + 0.436052471002795 NA promoter-TSS (NM_007913) promoter-TSS (NM_007913) -839 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak2_31_32_-0.321409054713902_4.8836895920015_0.436052471002795-3 chr16 32859552 32859975 + 0.436052471002795 NA intron (NM_172615, intron 1 of 18) intron (NM_172615, intron 1 of 18) 8603 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak2_30_32_-0.366889600232427_4.86094931924224_0.436052471002795 chr2 90679422 90679845 + 0.436052471002795 NA intron (NM_021512, intron 2 of 36) intron (NM_021512, intron 2 of 36) 2418 NM_021512 59015 Mm.24532 NM_021512 ENSMUSG00000051329 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197 nucleoporin 160 protein-coding common_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789-4 chr7 139285617 139286287 + 0.436052471002789 NA Intergenic Intergenic 37470 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-9 chr5 115490029 115490260 + 0.436052471002789 NA Intergenic CpG -5660 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding unique_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789 chr4 41713003 41713677 + 0.436052471002789 NA intron (NM_027278, intron 1 of 1) CpG 177 NM_027278 69961 Mm.425182 NM_027278 ENSMUSG00000036114 Rpp25l 2810432D09Rik|AW987258|Rppl25 ribonuclease P/MRP 25 subunit-like protein-coding common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-4 chr13 54694405 54694816 + 0.436052471002789 NA promoter-TSS (NR_027395) promoter-TSS (NR_027395) -650 NR_027396 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-3 chr12 8673446 8673940 + 0.436052471002789 NA promoter-TSS (NM_001160219) promoter-TSS (NM_001160219) -441 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-6 chr2 39190419 39190802 + 0.436052471002789 NA exon (NM_178778, exon 1 of 18) exon (NM_178778, exon 1 of 18) 120 NM_178778 320271 Mm.204836 NM_178778 ENSMUSG00000035236 Scai 9330112M16|A930041I02Rik|AI662729 suppressor of cancer cell invasion protein-coding common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-7 chr2 155810126 155810583 + 0.436052471002789 NA exon (NM_010808, exon 6 of 9) exon (NM_010808, exon 6 of 9) 8849 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-5 chr2 25983734 25984150 + 0.436052471002789 NA promoter-TSS (NM_001276361) promoter-TSS (NM_001276361) -660 NM_001276361 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789-3 chr6 37723054 37723909 + 0.436052471002789 NA Intergenic Intergenic -147330 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-8 chr3 151117603 151118079 + 0.436052471002789 NA Intergenic Intergenic -93979 NR_039540 100628568 NR_039540 ENSMUSG00000092830 Mir3963 mmu-mir-3963|mu-mir-3963 microRNA 3963 ncRNA common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789 chr1 136684079 136684366 + 0.436052471002789 NA intron (NR_045325, intron 1 of 2) intron (NR_045325, intron 1 of 2) 593 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789-5 chr9 59311411 59312013 + 0.436052471002789 NA intron (NM_001359282, intron 4 of 6) intron (NM_001359282, intron 4 of 6) 20140 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding unique_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789 chr4 145242515 145243325 + 0.436052471002789 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 3950 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789 chr11 76470022 76470447 + 0.436052471002789 NA intron (NM_001346670, intron 4 of 21) intron (NM_001346670, intron 4 of 21) -1769 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789-2 chr9 121061936 121062755 + 0.436052471002789 NA intron (NM_177589, intron 34 of 36) intron (NM_177589, intron 34 of 36) 107259 NR_106058 102465661 NR_106058 ENSMUSG00000106193 Mir7090 mmu-mir-7090 microRNA 7090 ncRNA common_peak2_38_26_0.251486274519101_4.88063063942302_0.436052471002789-2 chr11 77801152 77801841 + 0.436052471002789 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 198 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_38_26_0.251486274519101_4.88063063942302_0.436052471002789-2 chr12 108835374 108835830 + 0.436052471002789 NA intron (NM_181328, intron 1 of 3) CpG 274 NM_181328 214663 Mm.266264 NM_181328 ENSMUSG00000021265 Slc25a29 C030003J19Rik|CACL|mCACL solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 protein-coding common_peak1_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-4 chr3 121700291 121700672 + 0.435893058718175 NA Intergenic Intergenic -23056 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-6 chr4 139622821 139623352 + 0.435893058718175 NA 5' UTR (NM_175438, exon 1 of 15) 5' UTR (NM_175438, exon 1 of 15) 192 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-2 chr16 34751387 34751899 + 0.435893058718175 NA Intergenic Intergenic -33307 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding unique_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175 chr9 104063005 104063514 + 0.435893058718175 NA promoter-TSS (NM_175324) promoter-TSS (NM_175324) -138 NM_025692 66663 Mm.224935 NM_025692 ENSMUSG00000032557 Uba5 5730525G14Rik|AW240750|Ube1dc1 ubiquitin-like modifier activating enzyme 5 protein-coding common_peak2_51_36_0.209029829252919_5.31396828025541_0.435893058718175-4 chr7 31150489 31150973 + 0.435893058718175 NA intron (NR_153431, intron 1 of 18) CpG 440 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-7 chr6 39724870 39725463 + 0.435893058718175 NA exon (NM_139294, exon 1 of 22) exon (NM_139294, exon 1 of 22) 297 NM_139294 109880 Mm.245513 NM_139294 ENSMUSG00000002413 Braf 9930012E13Rik|AA120551|AA387315|AA473386|B-raf|Braf-2|Braf2|C230098H17|C87398|D6Ertd631e Braf transforming gene protein-coding common_peak1_43_43_-0.280256216040237_5.31930351061718_0.435893058718175 chr1 43235942 43236510 + 0.435893058718175 NA Intergenic Intergenic -39465 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-8 chr8 106399287 106399646 + 0.435893058718175 NA Intergenic Intergenic -15873 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-4 chr18 68084928 68085572 + 0.435893058718175 NA intron (NM_172631, intron 2 of 5) intron (NM_172631, intron 2 of 5) -142696 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-3 chr13 68582295 68582935 + 0.435893058718175 NA promoter-TSS (NR_131892) promoter-TSS (NR_131892) 405 NR_138478 69577 Mm.23670 NM_027123 ENSMUSG00000021532 Fastkd3 2310010B21Rik|AW048587 FAST kinase domains 3 protein-coding common_peak2_51_36_0.209029829252919_5.31396828025541_0.435893058718175-2 chr14 69690889 69691583 + 0.435893058718175 NA intron (NM_033325, intron 12 of 13) intron (NM_033325, intron 12 of 13) -1012 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak2_51_36_0.209029829252919_5.31396828025541_0.435893058718175 chr10 117224269 117224547 + 0.435893058718175 NA promoter-TSS (NM_026570) promoter-TSS (NM_026570) 99 NM_026570 64050 Mm.233529 NM_026570 ENSMUSG00000020171 Yeats4 4930573H17Rik|B230215M10Rik|GAS41|NuBI-1 YEATS domain containing 4 protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-6 chr4 3874737 3875422 + 0.435893058718175 NA Intergenic CpG -2974 NM_020021 17451 Mm.459300 NM_020021 ENSMUSG00000078365 Mos c-mos Moloney sarcoma oncogene protein-coding common_peak2_51_36_0.209029829252919_5.31396828025541_0.435893058718175-5 chr9 31279398 31280137 + 0.435893058718175 NA Intergenic ID_B1|SINE|B4 8366 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-2 chr15 80063148 80063666 + 0.435893058718175 NA Intergenic Intergenic 15172 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175 chr10 77581780 77582255 + 0.435893058718175 NA intron (NM_145925, intron 1 of 5) CpG 362 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-3 chr17 20944509 20944942 + 0.435893058718175 NA promoter-TSS (NM_016891) promoter-TSS (NM_016891) -729 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-8 chr7 79287287 79287868 + 0.435893058718175 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 14311 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-5 chr19 56602158 56602808 + 0.435893058718175 NA Intergenic Intergenic 54222 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak2_51_36_0.209029829252919_5.31396828025541_0.435893058718175-3 chr2 170129996 170130456 + 0.435893058718175 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 994 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-4 chr2 32362666 32363519 + 0.435893058718175 NA promoter-TSS (NM_028412) promoter-TSS (NM_028412) 82 NM_001252536 68379 Mm.170508 NM_028412 ENSMUSG00000039205 Ciz1 0610038H21Rik|2900056O04Rik|LSFR1|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175 chr1 52251505 52252264 + 0.435893058718175 NA Intergenic Intergenic -18652 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_51_36_0.209029829252919_5.31396828025541_0.435893058718175-5 chr4 64084353 64085082 + 0.435893058718175 NA Intergenic Intergenic -37702 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-9 chr8 11550368 11551220 + 0.435893058718175 NA promoter-TSS (NM_024248) promoter-TSS (NM_024248) -23 NM_001359137 71941 Mm.196576 NM_024248 ENSMUSG00000056228 Cars2 2310051N18Rik|2410044A07Rik|D530030H10Rik|cysRS cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-7 chr4 151634376 151635261 + 0.435893058718175 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 226950 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-3 chr16 91406365 91406723 + 0.435893058718175 NA TTS (NM_010509) TTS (NM_010509) 309 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_43_43_-0.280256216040237_5.31930351061718_0.435893058718175-2 chr13 59943291 59943798 + 0.435893058718175 NA Intergenic Intergenic -86167 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_149_110_0.141663618456413_6.86524767557831_0.435871204742955 chr12 10390759 10391765 + 0.435871204742955 NA intron (NM_023697, intron 1 of 1) intron (NM_023697, intron 1 of 1) 482 NM_023697 105014 Mm.119343 NM_023697 ENSMUSG00000020621 Rdh14 3110030G19Rik|AW215439|PAN2 retinol dehydrogenase 14 (all-trans and 9-cis) protein-coding common_peak1_134_122_-0.157365735258446_6.86383163771002_0.435871204742955 chr9 49798071 49799114 + 0.435871204742955 NA intron (NM_010875, intron 1 of 15) intron (NM_010875, intron 1 of 15) 477 NM_001113204 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_111_103_-0.182850583495656_6.60901442639326_0.435844194873134 chr17 70847193 70848389 + 0.435844194873134 NA intron (NM_001164074, intron 1 of 2) intron (NM_001164074, intron 1 of 2) -1014 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_125_92_0.14715650756556_6.61273706489081_0.435844194873109-2 chr8 84664173 84665672 + 0.435844194873109 NA Intergenic Intergenic -2070 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak1_125_92_0.14715650756556_6.61273706489081_0.435844194873109 chr12 73908070 73909640 + 0.435844194873109 NA intron (NM_010431, intron 1 of 14) intron (NM_010431, intron 1 of 14) 988 NM_001313919 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_184_165_-0.138531750682093_7.30577355600588_0.435760354629491 chr12 31264333 31266625 + 0.435760354629491 NA exon (NM_008482, exon 1 of 33) exon (NM_008482, exon 1 of 33) 185 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_84_61_0.168236466130211_6.03831454345198_0.435402433395212 chr17 29490878 29491682 + 0.435402433395212 NA intron (NM_008842, intron 1 of 5) CpG 235 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_85_61_0.184991240249314_6.04669193051153_0.435402433395212 chr11 50131176 50132005 + 0.435402433395212 NA intron (NM_029745, intron 1 of 20) CpG 230 NM_029745 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_84_61_0.168236466130211_6.03831454345198_0.435402433395212-2 chr2 72980616 72981216 + 0.435402433395212 NA promoter-TSS (NM_001018042) promoter-TSS (NM_001018042) -470 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak1_84_61_0.168236466130211_6.03831454345198_0.435402433395212-3 chr7 81213251 81214133 + 0.435402433395212 NA promoter-TSS (NM_008803) promoter-TSS (NM_008803) -112 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding common_peak2_84_61_0.168236466130211_6.03831454345198_0.435402433395212 chr1 23921643 23922302 + 0.435402433395212 NA intron (NM_001357395, intron 1 of 10) CpG 409 NM_001357395 98366 Mm.329963 NM_028534 ENSMUSG00000026155 Smap1 1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175 small ArfGAP 1 protein-coding common_peak1_85_61_0.184991240249314_6.04669193051153_0.435402433395212-2 chr9 102950574 102951876 + 0.435402433395212 NA Intergenic Intergenic -57264 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_84_61_0.168236466130211_6.03831454345198_0.435402433395212-2 chr4 141874191 141874903 + 0.435402433395212 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 373 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_73_70_-0.225841358020484_6.03682644049444_0.4354024333952 chr11 17210865 17211888 + 0.4354024333952 NA promoter-TSS (NM_178909) promoter-TSS (NM_178909) 213 NM_025443 66249 Mm.27831 NM_025443 ENSMUSG00000020116 Pno1 1810003N24Rik|AA407421|AU015468|AU019495|AU042323|Emi3|Imi3 partner of NOB1 homolog protein-coding common_peak2_73_70_-0.225841358020484_6.03682644049444_0.4354024333952 chr8 13668639 13669177 + 0.4354024333952 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 8679 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_73_70_-0.225841358020484_6.03682644049444_0.4354024333952-2 chr7 19603923 19604386 + 0.4354024333952 NA intron (NR_125834, intron 1 of 19) CpG 207 NR_125835 53609 Mm.20913 NM_016680 ENSMUSG00000061028 Clasrp Clasp|Sfrs16|Srsf16|Swap2 CLK4-associating serine/arginine rich protein protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-13 chr7 79270622 79270875 + 0.435191258261915 NA Intergenic Intergenic -2518 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-11 chr15 27935795 27936084 + 0.435191258261915 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 89909 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-3 chr2 108621735 108621973 + 0.435191258261915 NA Intergenic Intergenic 656436 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-16 chr9 63711377 63711739 + 0.435191258261915 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 46436 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-24 chr5 34990589 34990940 + 0.435191258261915 NA intron (NM_173402, intron 3 of 16) intron (NM_173402, intron 3 of 16) -8314 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding unique_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-4 chr6 129233724 129233997 + 0.435191258261915 NA intron (NR_040268, intron 2 of 3) intron (NR_040268, intron 2 of 3) 4185 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-5 chr13 41709973 41710342 + 0.435191258261915 NA Intergenic Intergenic 103941 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-9 chr13 8885502 8885773 + 0.435191258261915 NA promoter-TSS (NM_145360) promoter-TSS (NM_145360) 31 NM_145360 319554 Mm.29847 NM_145360 ENSMUSG00000058258 Idi1 4832416K17Rik|IPPI1 isopentenyl-diphosphate delta isomerase protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-31 chr8 67317042 67317289 + 0.435191258261915 NA Intergenic Intergenic -173593 NM_008673 17960 Mm.14125 NM_008673 ENSMUSG00000025588 Nat1 Nat-1 N-acetyl transferase 1 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-14 chr16 33894971 33895276 + 0.435191258261915 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 65458 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-17 chr18 44031642 44031847 + 0.435191258261915 NA intron (NM_001039218, intron 4 of 5) intron (NM_001039218, intron 4 of 5) 3875 NM_001039218 433178 Mm.120009 NM_001039218 ENSMUSG00000051050 Spink14 EG433178|Gm5505 serine peptidase inhibitor, Kazal type 14 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-6 chr2 130563966 130564183 + 0.435191258261915 NA promoter-TSS (NR_040348) promoter-TSS (NR_040348) 317 NM_207207 99045 Mm.30057 NM_207207 ENSMUSG00000037740 Mrps26 AI648866|GI008|MRP-S13|MRP-S26|Rpms13 mitochondrial ribosomal protein S26 protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-12 chr8 124645588 124645778 + 0.435191258261915 NA intron (NM_175149, intron 2 of 3) intron (NM_175149, intron 2 of 3) 17686 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-2 chr1 157301712 157302138 + 0.435191258261915 NA intron (NM_177644, intron 1 of 17) intron (NM_177644, intron 1 of 17) -110427 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-11 chr14 31780506 31780757 + 0.435191258261915 NA intron (NM_001024604, intron 1 of 27) intron (NM_001024604, intron 1 of 27) 49784 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-6 chr13 13163561 13163810 + 0.435191258261915 NA Intergenic Intergenic -19031 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-27 chr6 121081643 121082016 + 0.435191258261915 NA promoter-TSS (NM_153396) promoter-TSS (NM_153396) -202 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915 chr10 21694832 21695245 + 0.435191258261915 NA Intergenic Intergenic 4193 NR_045843 432436 Mm.244553 NM_001004162 ENSMUSG00000056716 Gm5420 EG432436 predicted gene 5420 ncRNA unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-19 chr6 114865395 114865768 + 0.435191258261915 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 56240 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-7 chr2 152914122 152914324 + 0.435191258261915 NA intron (NM_001081044, intron 3 of 11) intron (NM_001081044, intron 3 of 11) 2871 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-4 chr11 99106112 99106329 + 0.435191258261915 NA Intergenic Intergenic -16914 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-32 chr8 122153756 122154021 + 0.435191258261915 NA Intergenic Intergenic -128253 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-3 chr1 180313328 180313710 + 0.435191258261915 NA Intergenic Intergenic -16957 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-26 chr5 139734413 139734642 + 0.435191258261915 NA intron (NM_174850, intron 1 of 16) (CATATA)n|Simple_repeat|Simple_repeat 1806 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-10 chr5 121220239 121220502 + 0.435191258261915 NA 5' UTR (NM_181421, exon 1 of 76) 5' UTR (NM_181421, exon 1 of 76) 151 NM_181421 269700 Mm.184589 NM_181421 ENSMUSG00000042744 Hectd4 A130010L24|AU042671|BC019639|EG545802|Gm15800|mKIAA0614 HECT domain E3 ubiquitin protein ligase 4 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-4 chr1 183921095 183921288 + 0.435191258261915 NA Intergenic Intergenic 112807 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-9 chr5 125340194 125340413 + 0.435191258261915 NA intron (NM_001205083, intron 1 of 10) intron (NM_001205083, intron 1 of 10) 791 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-5 chr17 44651383 44651628 + 0.435191258261915 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 84671 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-4 chr11 59342460 59342703 + 0.435191258261915 NA Intergenic Intergenic 33072 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-16 chr18 54902357 54902627 + 0.435191258261915 NA intron (NM_001360787, intron 2 of 8) intron (NM_001360787, intron 2 of 8) 87688 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-13 chr15 41792236 41792555 + 0.435191258261915 NA intron (NM_001130163, intron 1 of 13) intron (NM_001130163, intron 1 of 13) 2880 NM_130885 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-11 chr6 89447291 89447563 + 0.435191258261915 NA intron (NM_001167736, intron 4 of 6) intron (NM_001167736, intron 4 of 6) -84814 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-2 chr10 77084245 77084461 + 0.435191258261915 NA intron (NM_001109991, intron 5 of 40) intron (NM_001109991, intron 5 of 40) 29352 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-7 chr11 115187688 115187922 + 0.435191258261915 NA promoter-TSS (NM_025400) promoter-TSS (NM_025400) 318 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-16 chr18 36708292 36708487 + 0.435191258261915 NA Intergenic Intergenic -12464 NM_172831 240216 Mm.252323 NM_172831 ENSMUSG00000044719 E230025N22Rik EG240216 Riken cDNA E230025N22 gene protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-34 chr9 77930323 77930535 + 0.435191258261915 NA intron (NM_134255, intron 1 of 7) intron (NM_134255, intron 1 of 7) 13064 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-5 chr10 59429819 59430160 + 0.435191258261915 NA intron (NM_010959, intron 5 of 8) intron (NM_010959, intron 5 of 8) 11790 NM_010959 18302 Mm.123013 NM_010959 ENSMUSG00000009654 Oit3 EF-9|LZP oncoprotein induced transcript 3 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-4 chr18 84675975 84676205 + 0.435191258261915 NA intron (NM_023149, intron 5 of 11) intron (NM_023149, intron 5 of 11) 5969 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-13 chr7 120843250 120843516 + 0.435191258261915 NA promoter-TSS (NM_001267710) promoter-TSS (NM_001267710) -217 NM_001267710 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding unique_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915 chr12 112849943 112850214 + 0.435191258261915 NA TTS (NM_019925) TTS (NM_019925) 10838 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915 chr1 93636086 93636337 + 0.435191258261915 NA promoter-TSS (NM_021537) promoter-TSS (NM_021537) -484 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-10 chr13 34676258 34676542 + 0.435191258261915 NA Intergenic Intergenic 23477 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 - predicted gene 15908 ncRNA common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-8 chr14 105589057 105589297 + 0.435191258261915 NA promoter-TSS (NR_102319) promoter-TSS (NR_102319) -372 NR_102319 380930 Mm.427836 NR_102319 ENSMUSG00000115149 9330188P03Rik Gm1589|mgt-6 RIKEN cDNA 9330188P03 gene ncRNA common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-12 chr4 119293601 119293826 + 0.435191258261915 NA intron (NM_011732, intron 2 of 7) CpG 800 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-12 chr15 36781392 36781720 + 0.435191258261915 NA intron (NM_001356569, intron 3 of 6) intron (NM_001356569, intron 3 of 6) 9376 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-35 chr9 90270237 90270527 + 0.435191258261915 NA exon (NM_194334, exon 1 of 13) exon (NM_194334, exon 1 of 13) 387 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-3 chr10 128491878 128492081 + 0.435191258261915 NA intron (NM_001317219, intron 4 of 5) intron (NM_001317219, intron 4 of 5) 1030 NM_001317220 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915 chr1 43252676 43252876 + 0.435191258261915 NA Intergenic Intergenic -56015 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-11 chr3 95651645 95651924 + 0.435191258261915 NA Intergenic PB1D11|SINE|Alu -6937 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-17 chr9 66126269 66126548 + 0.435191258261915 NA promoter-TSS (NM_026635) promoter-TSS (NM_026635) -203 NM_001359210 68250 Mm.27107 NM_026635 ENSMUSG00000032381 Fam96a 5730536A07Rik family with sequence similarity 96, member A protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-17 chr2 35266383 35266656 + 0.435191258261915 NA promoter-TSS (NM_001206369) promoter-TSS (NM_001206369) -225 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-2 chr1 153331220 153331500 + 0.435191258261915 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 1426 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-12 chr7 109155419 109155661 + 0.435191258261915 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 14972 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-30 chr8 45535950 45536141 + 0.435191258261915 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) 28257 NM_001205219 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-9 chr16 13818867 13819098 + 0.435191258261915 NA promoter-TSS (NM_010946) promoter-TSS (NM_010946) -269 NM_010946 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-6 chr11 96065565 96065779 + 0.435191258261915 NA promoter-TSS (NM_172300) promoter-TSS (NM_172300) -308 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-12 chr14 73238116 73238359 + 0.435191258261915 NA 5' UTR (NM_175116, exon 1 of 1) 5' UTR (NM_175116, exon 1 of 1) 346 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-2 chr1 184705293 184705593 + 0.435191258261915 NA Intergenic Intergenic -7054 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-5 chr2 94051452 94051661 + 0.435191258261915 NA intron (NM_019657, intron 7 of 10) intron (NM_019657, intron 7 of 10) -40826 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding unique_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-2 chr2 135052260 135052504 + 0.435191258261915 NA intron (NM_001145830, intron 3 of 31) intron (NM_001145830, intron 3 of 31) 163234 NR_040517 78805 Mm.78702 NR_040517 ENSMUSG00000085247 4930545L23Rik - RIKEN cDNA 4930545L23 gene ncRNA unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-21 chr2 113327818 113328111 + 0.435191258261915 NA intron (NM_010230, intron 1 of 19) intron (NM_010230, intron 1 of 19) 228 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-18 chr2 57124296 57124588 + 0.435191258261915 NA promoter-TSS (NM_001139509) promoter-TSS (NM_001139509) -439 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-2 chr11 76622632 76622937 + 0.435191258261915 NA Intergenic CpG -45045 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-14 chr17 23856955 23857178 + 0.435191258261915 NA intron (NM_027220, intron 3 of 4) intron (NM_027220, intron 3 of 4) 3294 NM_027220 69814 Mm.244143 NM_027220 ENSMUSG00000048992 Prss32 2010001P08Rik|mT5|tryptase-5 protease, serine 32 protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-3 chr1 182514494 182514699 + 0.435191258261915 NA intron (NM_009794, intron 1 of 20) intron (NM_009794, intron 1 of 20) 3014 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-10 chr3 27677277 27677566 + 0.435191258261915 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 33031 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-7 chr2 32427859 32428078 + 0.435191258261915 NA intron (NM_146118, intron 1 of 10) intron (NM_146118, intron 1 of 10) 3183 NM_001164358 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-14 chr5 36460360 36460560 + 0.435191258261915 NA intron (NR_126490, intron 1 of 1) intron (NR_126490, intron 1 of 1) 4394 NR_126490 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-3 chr11 32456240 32456456 + 0.435191258261915 NA intron (NM_001361561, intron 1 of 1) intron (NM_001361561, intron 1 of 1) 978 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-18 chr19 41911452 41911678 + 0.435191258261915 NA promoter-TSS (NM_023418) promoter-TSS (NM_023418) -306 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-7 chr11 5891763 5892136 + 0.435191258261915 NA Intergenic RMER5|LTR|ERV1 6833 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding unique_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915 chr10 24483062 24483432 + 0.435191258261915 NA Intergenic Intergenic -112195 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915 chr10 61783212 61783524 + 0.435191258261915 NA intron (NM_207000, intron 1 of 8) CpG 496 NM_207000 404634 Mm.272870 NM_207000 ENSMUSG00000020086 H2afy2 macroH2A2 H2A histone family, member Y2 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-28 chr7 7171388 7171589 + 0.435191258261915 NA 5' UTR (NM_146179, exon 1 of 4) 5' UTR (NM_146179, exon 1 of 4) 135 NM_146179 232854 Mm.184857 NM_146179 ENSMUSG00000034538 Zfp418 A230102I05Rik zinc finger protein 418 protein-coding unique_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-2 chr18 43469870 43470299 + 0.435191258261915 NA Intergenic Intergenic -31798 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-10 chr7 47073017 47073365 + 0.435191258261915 NA Intergenic BC1_Mm|scRNA|scRNA 10033 NR_106023 102465639 NR_106023 ENSMUSG00000098960 Mir7056 Gm27696|mmu-mir-7056 microRNA 7056 ncRNA common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-14 chr7 80442345 80442626 + 0.435191258261915 NA Intergenic Intergenic -37049 NM_001081454 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-10 chr3 123385524 123385840 + 0.435191258261915 NA intron (NM_201638, intron 1 of 10) (A)n|Simple_repeat|Simple_repeat 308 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-5 chr11 60143364 60143645 + 0.435191258261915 NA intron (NM_001037764, intron 1 of 4) intron (NM_001037764, intron 1 of 4) 3422 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-8 chr4 3938920 3939128 + 0.435191258261915 NA promoter-TSS (NM_019969) promoter-TSS (NM_019969) 136 NM_001285804 66433 Mm.27406 NM_181391 ENSMUSG00000042198 Chchd7 1810049H20Rik coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-6 chr18 61360511 61360718 + 0.435191258261915 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 37286 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA unique_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-5 chr7 70145457 70145713 + 0.435191258261915 NA Intergenic Intergenic 192237 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-8 chr12 84876976 84877438 + 0.435191258261915 NA promoter-TSS (NM_013589) promoter-TSS (NM_013589) -712 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-8 chr11 96410614 96410907 + 0.435191258261915 NA Intergenic Intergenic 45002 NM_008266 15407 Mm.890 NM_008266 ENSMUSG00000018973 Hoxb1 Hox-2.9 homeobox B1 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-15 chr16 93096599 93097013 + 0.435191258261915 NA Intergenic Intergenic 256383 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-7 chr13 75942846 75943104 + 0.435191258261915 NA intron (NM_028493, intron 2 of 11) intron (NM_028493, intron 2 of 11) 849 NM_028493 73296 Mm.276200 NM_028493 ENSMUSG00000021589 Rhobtb3 1700040C17Rik|2610033K01Rik|4930503C18Rik|AI317148|AW208826|mKIAA0878 Rho-related BTB domain containing 3 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-13 chr4 149557541 149557841 + 0.435191258261915 NA intron (NM_023465, intron 4 of 4) intron (NM_023465, intron 4 of 4) 12574 NM_001141930 67087 Mm.299735 NM_023465 ENSMUSG00000028988 Ctnnbip1 1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat catenin beta interacting protein 1 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-4 chr13 4608861 4609064 + 0.435191258261915 NA intron (NM_018859, intron 1 of 9) intron (NM_018859, intron 1 of 9) 202 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-20 chr2 92183923 92184271 + 0.435191258261915 NA promoter-TSS (NM_001346704) promoter-TSS (NM_001346704) -85 NM_138755 192285 Mm.330408 NM_138755 ENSMUSG00000058318 Phf21a 80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1 PHD finger protein 21A protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-2 chr1 150098898 150099119 + 0.435191258261915 NA intron (NR_015466, intron 1 of 4) intron (NR_015466, intron 1 of 4) 866 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-11 chr4 81077478 81077742 + 0.435191258261915 NA Intergenic Intergenic 166924 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-10 chr13 63048153 63048469 + 0.435191258261915 NA intron (NM_001289926, intron 3 of 15) intron (NM_001289926, intron 3 of 15) 83418 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-9 chr2 25497676 25497934 + 0.435191258261915 NA TTS (NM_027062) TTS (NM_027062) 2701 NM_027062 69379 Mm.24596 NM_027062 ENSMUSG00000015083 C8g - complement component 8, gamma polypeptide protein-coding common_peak1_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-5 chr12 52835713 52836025 + 0.435191258261915 NA intron (NM_198111, intron 2 of 13) intron (NM_198111, intron 2 of 13) 136486 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-9 chr11 103340428 103340619 + 0.435191258261915 NA intron (NM_001205236, intron 3 of 17) intron (NM_001205236, intron 3 of 17) 4179 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-4 chr11 76285889 76286146 + 0.435191258261915 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 42281 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915 chr1 133955327 133955752 + 0.435191258261915 NA Intergenic Intergenic -34138 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-7 chr19 28327931 28328237 + 0.435191258261915 NA intron (NM_175459, intron 6 of 10) intron (NM_175459, intron 6 of 10) -316918 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-11 chr7 90389623 90389862 + 0.435191258261915 NA intron (NM_001040088, intron 2 of 9) intron (NM_001040088, intron 2 of 9) 2761 NM_001040088 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-23 chr4 63531748 63532035 + 0.435191258261915 NA Intergenic Intergenic -12874 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-33 chr9 46120579 46120889 + 0.435191258261915 NA intron (NM_027498, intron 1 of 24) intron (NM_027498, intron 1 of 24) -107896 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-21 chr8 60776605 60776908 + 0.435191258261915 NA Intergenic Intergenic -113637 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-25 chr5 113206195 113206454 + 0.435191258261915 NA Intergenic Intergenic -20585 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-3 chr3 93556542 93556785 + 0.435191258261915 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 1546 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-3 chr12 3389835 3390172 + 0.435191258261915 NA intron (NM_008445, intron 4 of 7) PB1D7|SINE|Alu 24871 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-3 chr10 108431960 108432210 + 0.435191258261915 NA Intergenic (CAA)n|Simple_repeat|Simple_repeat 99896 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-22 chr3 144574851 144575142 + 0.435191258261915 NA intron (NM_053102, intron 1 of 4) intron (NM_053102, intron 1 of 4) 4569 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-15 chr17 56291440 56291675 + 0.435191258261915 NA Intergenic Intergenic -1046 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-20 chr7 25282407 25282706 + 0.435191258261915 NA 5' UTR (NM_027882, exon 1 of 20) 5' UTR (NM_027882, exon 1 of 20) 377 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-8 chr19 60789293 60789521 + 0.435191258261915 NA intron (NM_010123, intron 1 of 21) intron (NM_010123, intron 1 of 21) 1286 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-12 chr6 108665207 108665543 + 0.435191258261915 NA 3' UTR (NM_011498, exon 5 of 5) 3' UTR (NM_011498, exon 5 of 5) -4441 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-8 chr2 84525408 84525669 + 0.435191258261915 NA Intergenic Intergenic -18665 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915 chr1 82590439 82590677 + 0.435191258261915 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 3637 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-15 chr8 106622699 106622966 + 0.435191258261915 NA intron (NM_009864, intron 2 of 15) intron (NM_009864, intron 2 of 15) 19482 NM_009864 12550 Mm.35605 NM_009864 ENSMUSG00000000303 Cdh1 AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um cadherin 1 protein-coding common_peak2_17_11_0.313803727524793_3.74186436448355_0.435191258261915-14 chrX 74085111 74085458 + 0.435191258261915 NA intron (NM_010788, intron 1 of 3) CpG 406 NM_010788 17257 Mm.131408 NM_010788 ENSMUSG00000031393 Mecp2 1500041B07Rik|D630021H01Rik|Mbd5|WBP10 methyl CpG binding protein 2 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-19 chr2 73592363 73592592 + 0.435191258261915 NA Intergenic Intergenic -4049 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA common_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-6 chr18 61381340 61381681 + 0.435191258261915 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 16390 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-6 chr10 94992038 94992336 + 0.435191258261915 NA Intergenic Intergenic -47609 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-9 chr3 144197533 144197764 + 0.435191258261915 NA intron (NM_001161769, intron 2 of 4) intron (NM_001161769, intron 2 of 4) 4684 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_12_15_-0.567406845971642_3.71629657701418_0.435191258261915-13 chr15 77793597 77793845 + 0.435191258261915 NA intron (NM_022410, intron 5 of 40) intron (NM_022410, intron 5 of 40) -36711 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding unique_peak1_17_11_0.313803727524793_3.74186436448355_0.435191258261915-29 chr7 144061729 144062112 + 0.435191258261915 NA Intergenic Intergenic 52666 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_92_86_-0.191658354068491_6.34711431881448_0.435156757609696-3 chr4 134759812 134760925 + 0.435156757609696 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 7636 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_104_76_0.158350074505114_6.34596157794746_0.435156757609696 chr4 148557966 148559118 + 0.435156757609696 NA promoter-TSS (NM_001355489) promoter-TSS (NM_001355489) 123 NM_001355490 50912 Mm.266635 NM_016699 ENSMUSG00000017264 Exosc10 PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4 exosome component 10 protein-coding common_peak2_92_86_-0.191658354068491_6.34711431881448_0.435156757609696 chr17 33759991 33760396 + 0.435156757609696 NA intron (NM_008997, intron 1 of 4) CpG 293 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak2_92_86_-0.191658354068491_6.34711431881448_0.435156757609696-2 chr19 4011807 4012704 + 0.435156757609696 NA intron (NM_133666, intron 1 of 9) intron (NM_133666, intron 1 of 9) 500 NM_133666 17995 Mm.29842 NM_133666 ENSMUSG00000037916 Ndufv1 CI-51kD NADH dehydrogenase (ubiquinone) flavoprotein 1 protein-coding common_peak1_92_86_-0.191658354068491_6.34711431881448_0.435156757609696-2 chr17 33760013 33760377 + 0.435156757609696 NA intron (NM_008997, intron 1 of 4) CpG 291 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak1_92_86_-0.191658354068491_6.34711431881448_0.435156757609696 chr11 50430375 50431420 + 0.435156757609696 NA exon (NM_172557, exon 1 of 18) exon (NM_172557, exon 1 of 18) 214 NM_172557 216724 Mm.390400 NM_172557 ENSMUSG00000020375 Rufy1 3000002E04Rik|Rabip4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding common_peak2_203_152_0.119168657724765_7.31697217155503_0.434912444014988 chr9 56994503 56996441 + 0.434912444014988 NA 5' UTR (NM_019651, exon 1 of 13) 5' UTR (NM_019651, exon 1 of 13) 504 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding common_peak1_67_48_0.188066033647999_5.70874286093921_0.434791164020309 chr13 21179933 21180821 + 0.434791164020309 NA 5' UTR (NM_009054, exon 1 of 8) 5' UTR (NM_009054, exon 1 of 8) 446 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding common_peak2_57_56_-0.257976992787475_5.703901517771_0.434791164020309 chr10 115314136 115315046 + 0.434791164020309 NA intron (NM_024454, intron 1 of 6) intron (NM_024454, intron 1 of 6) 1000 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding common_peak1_58_56_-0.233488928842061_5.71614554974371_0.434791164020309 chr16 33594449 33595248 + 0.434791164020309 NA intron (NM_001083902, intron 5 of 11) intron (NM_001083902, intron 5 of 11) 76253 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak2_67_48_0.188066033647999_5.70874286093921_0.434791164020309 chr7 142386610 142387334 + 0.434791164020309 NA intron (NM_009983, intron 1 of 8) intron (NM_009983, intron 1 of 8) 898 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_58_56_-0.233488928842061_5.71614554974371_0.434791164020309-2 chr17 17838585 17839132 + 0.434791164020309 NA intron (NM_001162909, intron 8 of 8) intron (NM_001162909, intron 8 of 8) 7883 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak1_58_56_-0.233488928842061_5.71614554974371_0.434791164020309-3 chr19 5345236 5345884 + 0.434791164020309 NA 3' UTR (NM_028623, exon 3 of 3) 3' UTR (NM_028623, exon 3 of 3) 4014 NM_028623 73720 Mm.36816 NM_028623 ENSMUSG00000024846 Cst6 1110017E11Rik|N28197|ichq cystatin E/M protein-coding common_peak1_57_56_-0.257976992787475_5.703901517771_0.434791164020309 chr4 148151380 148151936 + 0.434791164020309 NA 5' UTR (NM_015797, exon 1 of 6) 5' UTR (NM_015797, exon 1 of 6) 267 NM_001163705 50762 Mm.27445 NM_015797 ENSMUSG00000055401 Fbxo6 AA408845|FBG2|Fbs2|Fbx6b|Fbxo6b F-box protein 6 protein-coding common_peak1_67_48_0.188066033647999_5.70874286093921_0.434791164020309-2 chr16 32277420 32278074 + 0.434791164020309 NA 5' UTR (NM_027355, exon 1 of 6) 5' UTR (NM_027355, exon 1 of 6) 286 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding common_peak1_58_56_-0.233488928842061_5.71614554974371_0.434791164020309-4 chr9 119983281 119983718 + 0.434791164020309 NA promoter-TSS (NM_001357560) promoter-TSS (NM_001357560) 280 NM_001357562 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_150_111_0.138242982199436_6.87647641315732_0.434717699427005 chr11 96828924 96830818 + 0.434717699427005 NA promoter-TSS (NM_001130450) promoter-TSS (NM_001130450) 97 NM_008686 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak2_150_111_0.138242982199436_6.87647641315732_0.434717699427005-2 chr8 46162970 46164183 + 0.434717699427005 NA promoter-TSS (NM_001357215) promoter-TSS (NM_001357215) -75 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding common_peak1_150_111_0.138242982199436_6.87647641315732_0.434717699427005 chr12 112828235 112829371 + 0.434717699427005 NA intron (NM_001359292, intron 1 of 2) intron (NM_001359292, intron 1 of 2) 586 NM_001359292 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak2_160_144_-0.142451718217795_7.10868323090604_0.434526592557569 chr17 79352772 79354989 + 0.434526592557569 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 1211 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_160_144_-0.142451718217795_7.10868323090604_0.434526592557569-2 chr7 7298012 7299851 + 0.434526592557569 NA promoter-TSS (NM_001302386) promoter-TSS (NM_001302386) 40 NR_049193 100885832 NR_049193 ENSMUSG00000093599 Mir5620 Gm23572|mir-5620|mmu-mir-5620 microRNA 5620 ncRNA common_peak1_126_93_0.143050769896278_6.62611423662578_0.434474090223577 chr2 103797173 103798184 + 0.434474090223577 NA promoter-TSS (NM_001111290) promoter-TSS (NM_001111290) -38 NM_016739 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak1_126_93_0.143050769896278_6.62611423662578_0.434474090223577-4 chr7 5079711 5080956 + 0.434474090223577 NA promoter-TSS (NM_001252454) promoter-TSS (NM_001252454) 98 NM_001252454 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding common_peak1_126_93_0.143050769896278_6.62611423662578_0.434474090223577-3 chr5 114379499 114380415 + 0.434474090223577 NA promoter-TSS (NM_054093) promoter-TSS (NM_054093) 548 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak1_113_104_-0.171301440466766_6.62859479743274_0.434474090223577 chr8 107587720 107588610 + 0.434474090223577 NA intron (NM_010817, intron 1 of 6) CpG 317 NM_010817 17463 Mm.18347 NM_010817 ENSMUSG00000039067 Psmd7 AW107203|Mov-34|Mov34 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding common_peak1_126_93_0.143050769896278_6.62611423662578_0.434474090223577-2 chr2 163995158 163996144 + 0.434474090223577 NA intron (NM_018753, intron 1 of 5) CpG 454 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding common_peak1_350_304_-0.0987304104592592_8.20330022722062_0.434143331632635 chr14 31661322 31663853 + 0.434143331632635 NA intron (NM_025295, intron 2 of 3) intron (NM_025295, intron 2 of 3) 21530 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-6 chr5 144100422 144100823 + 0.433767012642197 NA 5' UTR (NM_001081109, exon 1 of 14) 5' UTR (NM_001081109, exon 1 of 14) 186 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-3 chr12 75702184 75702551 + 0.433767012642197 NA Intergenic Intergenic -32830 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-3 chr15 25405893 25406515 + 0.433767012642197 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 7560 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-5 chr17 83323380 83323970 + 0.433767012642197 NA Intergenic Intergenic -27256 NM_001114361 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-10 chr3 154691564 154692077 + 0.433767012642197 NA Intergenic Intergenic -19313 NM_175176 209601 Mm.331454 NM_175176 ENSMUSG00000078161 Erich3 1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133 glutamate rich 3 protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-3 chr12 86084272 86084663 + 0.433767012642197 NA intron (NM_029601, intron 1 of 7) intron (NM_029601, intron 1 of 7) 1906 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-15 chr9 48480179 48480553 + 0.433767012642197 NA intron (NM_024233, intron 1 of 6) CpG 245 NM_001357505 104444 Mm.21911 NM_024233 ENSMUSG00000032026 Rexo2 1810038D15Rik|AW107347|Rex2|Sfn|Smfn RNA exonuclease 2 protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-6 chr4 141682202 141682536 + 0.433767012642197 NA Intergenic Intergenic 3347 NM_023544 69994 Mm.441022 NM_023544 ENSMUSG00000040715 Rsc1a1 1700027M01Rik|Rs1 regulatory solute carrier protein, family 1, member 1 protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-4 chr13 114735808 114736061 + 0.433767012642197 NA Intergenic Intergenic -82303 NM_013826 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-7 chr4 141886297 141886627 + 0.433767012642197 NA Intergenic Intergenic -11542 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197 chr11 80382618 80382993 + 0.433767012642197 NA promoter-TSS (NM_011751) promoter-TSS (NM_011751) -474 NM_001130169 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-5 chr15 61531216 61531526 + 0.433767012642197 NA Intergenic Intergenic 243080 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-5 chr15 103359910 103360337 + 0.433767012642197 NA intron (NM_001314041, intron 1 of 30) intron (NM_001314041, intron 1 of 30) 6668 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-2 chr10 70494654 70495071 + 0.433767012642197 NA intron (NM_001359551, intron 5 of 14) intron (NM_001359551, intron 5 of 14) 53952 NM_001143776 71721 Mm.477813 NM_024244 ENSMUSG00000043259 Fam13c 1200015N20Rik|C030038O19Rik|mKIAA1796 family with sequence similarity 13, member C protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-8 chr6 99025786 99026388 + 0.433767012642197 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) 2211 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-6 chr16 18687120 18687358 + 0.433767012642197 NA Intergenic Intergenic -57301 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-13 chr6 127446579 127447023 + 0.433767012642197 NA promoter-TSS (NM_001346513) promoter-TSS (NM_001346513) -39 NM_001346513 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding unique_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-2 chr3 53065903 53066138 + 0.433767012642197 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 24473 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-8 chr2 180453227 180453542 + 0.433767012642197 NA Intergenic Intergenic -2861 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-2 chr11 51619909 51620193 + 0.433767012642197 NA intron (NM_026631, intron 1 of 3) CpG 278 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-14 chr8 31720177 31720562 + 0.433767012642197 NA Intergenic Intergenic 197834 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-7 chr6 121087852 121088132 + 0.433767012642197 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -6365 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-7 chr16 45953530 45953941 + 0.433767012642197 NA intron (NR_152227, intron 2 of 2) intron (NR_152227, intron 2 of 2) 8129 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197 chr10 17174837 17175298 + 0.433767012642197 NA Intergenic Intergenic -79285 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-4 chr16 55495489 55495805 + 0.433767012642197 NA TTS (NR_039578) TTS (NR_039578) 916 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-8 chr8 120015617 120015943 + 0.433767012642197 NA exon (NM_030209, exon 5 of 15) exon (NM_030209, exon 5 of 15) 23342 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-9 chr3 53108894 53109297 + 0.433767012642197 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 67548 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-12 chr6 82761682 82762135 + 0.433767012642197 NA intron (NM_013820, intron 1 of 17) intron (NM_013820, intron 1 of 17) 12546 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-4 chr14 20082876 20083305 + 0.433767012642197 NA promoter-TSS (NM_026209) promoter-TSS (NM_026209) 82 NM_026209 67509 Mm.292423 NM_026209 ENSMUSG00000045107 Saysd1 1810063B07Rik|4930488P03Rik SAYSVFN motif domain containing 1 protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197 chr10 61382860 61383259 + 0.433767012642197 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 464 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding common_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-11 chr4 135946547 135946847 + 0.433767012642197 NA promoter-TSS (NM_001357529) promoter-TSS (NM_001357529) 249 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-9 chr9 99645829 99646069 + 0.433767012642197 NA intron (NM_001311142, intron 5 of 15) intron (NM_001311142, intron 5 of 15) 16371 NM_001311142 72507 Mm.221455 NM_028258 ENSMUSG00000037784 Dzip1l 2610524A10Rik|AI663976 DAZ interacting protein 1-like protein-coding unique_peak1_21_23_-0.398732118550852_4.38559644144573_0.433767012642197 chr11 58847234 58847526 + 0.433767012642197 NA Intergenic Intergenic 6264 NM_146537 258530 Mm.377556 NM_146537 ENSMUSG00000094805 Olfr311 MOR222-1 olfactory receptor 311 protein-coding unique_peak2_21_23_-0.398732118550852_4.38559644144573_0.433767012642197-2 chr14 121182815 121183295 + 0.433767012642197 NA intron (NM_134082, intron 2 of 26) intron (NM_134082, intron 2 of 26) -65651 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-3 chr14 8332558 8332942 + 0.433767012642194 NA Intergenic Intergenic -15143 NM_001360339 268709 Mm.256058 NM_183187 ENSMUSG00000021750 Fam107a DRR1 family with sequence similarity 107, member A protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-9 chr4 46305001 46305298 + 0.433767012642194 NA Intergenic CpG -39045 NM_183298 110805 Mm.354634 NM_183298 ENSMUSG00000070990 Foxe1 Titf2 forkhead box E1 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-6 chr16 91557104 91557332 + 0.433767012642194 NA intron (NM_008338, intron 2 of 6) intron (NM_008338, intron 2 of 6) 10124 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-7 chr4 46450315 46450944 + 0.433767012642194 NA promoter-TSS (NM_130889) promoter-TSS (NM_130889) -297 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-3 chr14 73237466 73237817 + 0.433767012642194 NA promoter-TSS (NM_175116) promoter-TSS (NM_175116) -250 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-10 chr4 141304186 141304437 + 0.433767012642194 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 3090 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-8 chr4 150808113 150808437 + 0.433767012642194 NA Intergenic Intergenic -45521 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194 chr1 52233415 52233762 + 0.433767012642194 NA promoter-TSS (NM_001113383) promoter-TSS (NM_001113383) -356 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194 chr1 36065291 36065677 + 0.433767012642194 NA Intergenic Intergenic -2916 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-5 chr2 18671863 18672168 + 0.433767012642194 NA promoter-TSS (NM_147778) promoter-TSS (NM_147778) -447 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-7 chr17 24034702 24035092 + 0.433767012642194 NA Intergenic Intergenic -3346 NM_175440 213171 Mm.133083 NM_175440 ENSMUSG00000050762 Prss27 CAPH2|Mpn|marapsin protease, serine 27 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-6 chr3 109155603 109155869 + 0.433767012642194 NA intron (NM_172685, intron 4 of 9) RMER5|LTR|ERV1 32587 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-6 chr3 138766746 138767040 + 0.433767012642194 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 24685 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-8 chr5 9161914 9162159 + 0.433767012642194 NA promoter-TSS (NM_011806) promoter-TSS (NM_011806) -260 NR_152861 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-4 chr15 36716274 36716635 + 0.433767012642194 NA Intergenic Intergenic 74478 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-10 chrX 136172589 136173069 + 0.433767012642194 NA promoter-TSS (NM_001168578) promoter-TSS (NM_001168578) -578 NM_025703 66684 Mm.182094 NM_025703 ENSMUSG00000051579 Tceal8 3930402F23Rik transcription elongation factor A (SII)-like 8 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-3 chr12 51844562 51845047 + 0.433767012642194 NA Intergenic Intergenic -15268 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-7 chr4 95053612 95053982 + 0.433767012642194 NA Intergenic Intergenic -1575 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-14 chr7 130963952 130964315 + 0.433767012642194 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 27930 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-10 chr9 67144092 67144426 + 0.433767012642194 NA intron (NR_045748, intron 1 of 2) intron (NR_045748, intron 1 of 2) 10698 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA unique_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194 chr9 110868673 110869002 + 0.433767012642194 NA intron (NM_146260, intron 4 of 5) intron (NM_146260, intron 4 of 5) 10870 NM_146227 235631 Mm.102265 NM_146227 ENSMUSG00000048752 Prss50 79H19C|Tsp50 protease, serine 50 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194 chr1 178758252 178758561 + 0.433767012642194 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 229281 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-4 chr2 148159482 148159802 + 0.433767012642194 NA Intergenic Intergenic -112673 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-9 chr8 26886662 26887111 + 0.433767012642194 NA Intergenic Intergenic -62463 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-15 chr8 111940089 111940326 + 0.433767012642194 NA promoter-TSS (NM_026693) promoter-TSS (NM_026693) -496 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-4 chr14 76702083 76702390 + 0.433767012642194 NA Intergenic Intergenic 24668 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-11 chr5 88675211 88675498 + 0.433767012642194 NA intron (NM_178700, intron 1 of 9) CpG 226 NM_001098476 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-5 chr16 8862788 8863064 + 0.433767012642194 NA Intergenic Intergenic 32826 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-9 chr6 115544791 115545371 + 0.433767012642194 NA intron (NM_199033, intron 1 of 11) ID_B1|SINE|B4 377 NM_199033 381802 Mm.291208 NM_199033 ENSMUSG00000042389 Tsen2 AU067695 tRNA splicing endonuclease subunit 2 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-8 chr2 3749345 3749782 + 0.433767012642194 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 36105 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-2 chr14 73234281 73234656 + 0.433767012642194 NA intron (NM_009029, intron 17 of 26) intron (NM_009029, intron 17 of 26) -3423 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-12 chr5 121170334 121170771 + 0.433767012642194 NA intron (NM_011202, intron 2 of 15) intron (NM_011202, intron 2 of 15) 20845 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-5 chr3 54431283 54431827 + 0.433767012642194 NA Intergenic Intergenic 70448 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding unique_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-2 chr11 35931870 35932487 + 0.433767012642194 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 47911 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_27_18_0.28377158034834_4.38981330361776_0.433767012642194-13 chr6 91076524 91076895 + 0.433767012642194 NA exon (NM_018815, exon 7 of 40) exon (NM_018815, exon 7 of 40) 40117 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_27_18_0.28377158034834_4.38981330361776_0.433767012642194-2 chr11 94346044 94346447 + 0.433767012642194 NA intron (NM_029600, intron 29 of 30) intron (NM_029600, intron 29 of 30) 18244 NM_146024 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak1_161_145_-0.143497085325648_7.11807601621719_0.433562006978009 chr15 79347223 79348687 + 0.433562006978009 NA promoter-TSS (NM_001304831) promoter-TSS (NM_001304831) -106 NM_001304831 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_93_87_-0.192825294908487_6.36301897118305_0.433519020835319 chr13 41643398 41644411 + 0.433519020835319 NA Intergenic Intergenic 37688 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_93_87_-0.192825294908487_6.36301897118305_0.433519020835319 chr1 180941746 180942841 + 0.433519020835319 NA promoter-TSS (NM_144794) promoter-TSS (NM_144794) -225 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding common_peak2_105_77_0.153312856834368_6.36205864727943_0.433519020835319 chrX 96099789 96101052 + 0.433519020835319 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 4375 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_75_71_-0.20781652647041_6.06601673820711_0.433378678297155-2 chr2 117911636 117912515 + 0.433378678297155 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 90147 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA unique_peak2_74_71_-0.226790537062549_6.05652973291104_0.433378678297155 chr8 94803931 94805197 + 0.433378678297155 NA Intergenic Intergenic -5889 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding common_peak2_75_71_-0.20781652647041_6.06601673820711_0.433378678297155 chr13 51962096 51962936 + 0.433378678297155 NA Intergenic Intergenic 115841 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_75_71_-0.20781652647041_6.06601673820711_0.433378678297155-2 chr14 20478972 20479872 + 0.433378678297155 NA intron (NM_001110794, intron 1 of 12) intron (NM_001110794, intron 1 of 12) 711 NM_001110794 11750 Mm.280231 NM_009674 ENSMUSG00000021814 Anxa7 AI265384|AI316497|Anx7|synexin annexin A7 protein-coding common_peak1_74_71_-0.226790537062549_6.05652973291104_0.433378678297155 chr12 13099281 13100341 + 0.433378678297155 NA Intergenic Intergenic 149363 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak1_75_71_-0.20781652647041_6.06601673820711_0.433378678297155 chr12 108179828 108180419 + 0.433378678297155 NA promoter-TSS (NM_028262) promoter-TSS (NM_028262) 385 NM_009832 12454 Mm.474441 NM_009832 ENSMUSG00000021258 Ccnk AW123198|AW413594|CPR4|CycK cyclin K protein-coding common_peak2_86_62_0.178468700104804_6.06651427355232_0.433378678297142 chr7 75455560 75456148 + 0.433378678297142 NA intron (NM_029332, intron 1 of 36) CpG 320 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_86_62_0.178468700104804_6.06651427355232_0.433378678297142-2 chr3 130057744 130058631 + 0.433378678297142 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 2720 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak1_86_62_0.178468700104804_6.06651427355232_0.433378678297142 chr16 11066459 11067195 + 0.433378678297142 NA intron (NM_009223, intron 1 of 1) CpG 529 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding common_peak1_86_62_0.178468700104804_6.06651427355232_0.433378678297142-3 chr4 43631087 43632284 + 0.433378678297142 NA promoter-TSS (NM_001355466) promoter-TSS (NM_001355466) -250 NM_001355466 230103 Mm.103477 NM_173788 ENSMUSG00000028469 Npr2 GC-B|GC-B2|GC-B3|cn|mNPR-B|pwe natriuretic peptide receptor 2 protein-coding common_peak2_127_94_0.139019497167116_6.63936535691451_0.433131567979839 chr3 145648724 145649753 + 0.433131567979839 NA exon (NM_010516, exon 2 of 5) exon (NM_010516, exon 2 of 5) 747 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_127_94_0.139019497167116_6.63936535691451_0.433131567979839 chr18 62015307 62016738 + 0.433131567979839 NA TTS (NM_172628) TTS (NM_172628) 62947 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak1_114_105_-0.17246523358631_6.64168783777004_0.43313156797979 chr1 86358623 86359412 + 0.43313156797979 NA promoter-TSS (NR_015507) promoter-TSS (NR_015507) 438 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding common_peak1_236_178_0.10753251166523_7.53758203309687_0.432758969302528 chr6 85372221 85374559 + 0.432758969302528 NA intron (NM_001003955, intron 1 of 5) B1_Mus1|SINE|Alu 1244 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak2_162_146_-0.14452935511194_7.12740766728039_0.432611265731315 chr8 22592842 22594308 + 0.432611265731315 NA intron (NM_011696, intron 1 of 8) CpG 238 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak2_52_37_0.197842541826275_5.34684878435672_0.432554671146866-4 chr7 98178442 98178926 + 0.432554671146866 NA promoter-TSS (NM_007602) promoter-TSS (NM_007602) -410 NM_007602 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866 chr1 59685026 59685414 + 0.432554671146866 NA exon (NM_018868, exon 1 of 15) exon (NM_018868, exon 1 of 15) 214 NM_018868 55989 Mm.220367 NM_018868 ENSMUSG00000026020 Nop58 MSSP|Nol5|SIK|nop5 NOP58 ribonucleoprotein protein-coding common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-2 chr10 75518070 75518648 + 0.432554671146866 NA promoter-TSS (NM_001347201) promoter-TSS (NM_001347201) 317 NM_026095 67332 Mm.45151 NM_026095 ENSMUSG00000020180 Snrpd3 1700043E15Rik|2310009E13Rik|AW046420|SMD3 small nuclear ribonucleoprotein D3 protein-coding common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866-2 chr18 73703583 73704256 + 0.432554671146866 NA promoter-TSS (NM_008540) promoter-TSS (NM_008540) -7 NR_155448 105246496 Mm.109270 NR_155448 4930578L24Rik - RIKEN cDNA 4930578L24 gene ncRNA common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-3 chr11 116104376 116104897 + 0.432554671146866 NA Intergenic Intergenic 5599 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866-7 chr9 107534563 107535503 + 0.432554671146866 NA exon (NM_019704, exon 1 of 2) exon (NM_019704, exon 1 of 2) 1088 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding common_peak2_52_37_0.197842541826275_5.34684878435672_0.432554671146866-2 chr17 66340008 66340848 + 0.432554671146866 NA intron (NM_172963, intron 13 of 13) intron (NM_172963, intron 13 of 13) 109322 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866-5 chr5 103693779 103694512 + 0.432554671146866 NA Intergenic Intergenic -38413 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-7 chr7 139971746 139972088 + 0.432554671146866 NA TTS (NM_001347613) TTS (NM_001347613) 6838 NM_001347614 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_44_44_-0.280484948903091_5.35161062187813_0.432554671146866 chr18 34330431 34331008 + 0.432554671146866 NA promoter-TSS (NM_025527) promoter-TSS (NM_025527) -426 NM_025527 66384 Mm.29452 NM_025527 ENSMUSG00000014504 Srp19 2310020D23Rik signal recognition particle 19 protein-coding common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-4 chr14 9457930 9458727 + 0.432554671146866 NA Intergenic Intergenic -425767 NR_030680 100042415 Mm.235938 NR_030680 ENSMUSG00000089686 Mnd1-ps Gm3833 Mnd1 retrotransposed pseudogene pseudo common_peak2_52_37_0.197842541826275_5.34684878435672_0.432554671146866 chr15 78832644 78833184 + 0.432554671146866 NA Intergenic Intergenic -9733 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_53_37_0.224619337456574_5.36023718217187_0.432554671146866 chr14 26579581 26579998 + 0.432554671146866 NA exon (NM_001134465, exon 1 of 20) exon (NM_001134465, exon 1 of 20) 239 NM_145969 211922 Mm.260512 NM_145969 ENSMUSG00000040818 Dennd6a Fam116a DENN/MADD domain containing 6A protein-coding common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-5 chr3 36449744 36450216 + 0.432554671146866 NA intron (NM_009673, intron 12 of 12) intron (NM_009673, intron 12 of 12) 25544 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866-6 chr6 128399963 128400506 + 0.432554671146866 NA exon (NM_021717, exon 1 of 6) exon (NM_021717, exon 1 of 6) 468 NM_001162858 60345 Mm.269883 NM_021717 ENSMUSG00000001520 Nrip2 AW491344|NIX1 nuclear receptor interacting protein 2 protein-coding common_peak2_44_44_-0.280484948903091_5.35161062187813_0.432554671146866-3 chr7 123098388 123099011 + 0.432554671146866 NA Intergenic MIRb|SINE|MIR -25186 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866 chr1 64795957 64796530 + 0.432554671146866 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -58493 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866-3 chr19 41270527 41271172 + 0.432554671146866 NA Intergenic Intergenic -6845 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-8 chr8 126875306 126875985 + 0.432554671146866 NA Intergenic Intergenic 26625 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_53_37_0.224619337456574_5.36023718217187_0.432554671146866-6 chr7 24971836 24972698 + 0.432554671146866 NA exon (NM_010261, exon 2 of 5) exon (NM_010261, exon 2 of 5) 461 NM_010261 14470 Mm.22473 NM_010261 ENSMUSG00000003380 Rabac1 2310040I06Rik|Gbpap1|PRA1|prenylin Rab acceptor 1 (prenylated) protein-coding common_peak2_52_37_0.197842541826275_5.34684878435672_0.432554671146866-3 chr18 84681193 84682049 + 0.432554671146866 NA intron (NM_023149, intron 2 of 11) intron (NM_023149, intron 2 of 11) 438 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak2_44_44_-0.280484948903091_5.35161062187813_0.432554671146866-2 chr5 24685023 24685518 + 0.432554671146866 NA promoter-TSS (NM_016736) promoter-TSS (NM_016736) -545 NM_016736 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding unique_peak2_53_37_0.224619337456574_5.36023718217187_0.432554671146866 chr19 7240391 7240961 + 0.432554671146866 NA intron (NM_027643, intron 1 of 7) intron (NM_027643, intron 1 of 7) 546 NM_027643 70999 Mm.329605 NM_027643 ENSMUSG00000024764 Naa40 4931433E08Rik|AU023197|Nat11|NatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding common_peak1_44_44_-0.280484948903091_5.35161062187813_0.432554671146866-3 chr9 27029246 27029964 + 0.432554671146866 NA promoter-TSS (NM_178113) promoter-TSS (NM_178113) 489 NM_178027 69091 Mm.218717 NM_178027 ENSMUSG00000031988 Vps26b 1810012I05Rik|2310075A12Rik|AI848392 VPS26 retromer complex component B protein-coding common_peak1_44_44_-0.280484948903091_5.35161062187813_0.432554671146866-2 chr8 124020668 124020968 + 0.432554671146866 NA intron (NM_133966, intron 1 of 4) CpG 238 NM_001357315 102162 Mm.291777 NM_133966 ENSMUSG00000038697 Taf5l 1110005N04Rik|AI849020 TATA-box binding protein associated factor 5 like protein-coding common_peak2_44_44_-0.280484948903091_5.35161062187813_0.432554671146866 chr13 52928791 52929542 + 0.432554671146866 NA intron (NM_016709, intron 1 of 9) intron (NM_016709, intron 1 of 9) 511 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_52_37_0.197842541826275_5.34684878435672_0.432554671146866-4 chr4 141406816 141407623 + 0.432554671146866 NA exon (NM_019701, exon 16 of 20) exon (NM_019701, exon 16 of 20) -8513 NM_024412 12733 Mm.167900 NM_024412 ENSMUSG00000033770 Clcnka C75963|CLC-K1|Clcnk1 chloride channel, voltage-sensitive Ka protein-coding common_peak1_137_125_-0.160645999049452_6.89695692397519_0.432468923875127 chr8 13104013 13105396 + 0.432468923875127 NA intron (NM_178708, intron 1 of 13) CpG 639 NM_178708 234069 Mm.103427 NM_178708 ENSMUSG00000038542 Pcid2 A730042J05Rik PCI domain containing 2 protein-coding common_peak2_137_125_-0.160645999049452_6.89695692397519_0.432468923875127 chr10 62449206 62450182 + 0.432468923875127 NA promoter-TSS (NM_181423) promoter-TSS (NM_181423) 44 NM_001359806 338359 Mm.235898 NM_181423 ENSMUSG00000020079 Supv3l1 6330443E10Rik suppressor of var1, 3-like 1 (S. cerevisiae) protein-coding common_peak1_152_113_0.131557068053376_6.89866854819143_0.432468923875127 chr3 33799743 33800790 + 0.432468923875127 NA promoter-TSS (NM_025978) promoter-TSS (NM_025978) 83 NM_001290500 67120 Mm.275710 NM_025978 ENSMUSG00000027677 Ttc14 2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980 tetratricopeptide repeat domain 14 protein-coding common_peak2_69_49_0.200444823197834_5.74407860137364_0.432262512709542 chr14 20155796 20156554 + 0.432262512709542 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 25607 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_68_49_0.179832714248985_5.73377254689922_0.432262512709542-3 chr15 53132738 53133515 + 0.432262512709542 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 213057 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_69_49_0.200444823197834_5.74407860137364_0.432262512709542-2 chr12 84996289 84996799 + 0.432262512709542 NA exon (NM_178363, exon 1 of 21) exon (NM_178363, exon 1 of 21) 223 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak1_69_49_0.200444823197834_5.74407860137364_0.432262512709542-3 chr15 81465484 81466049 + 0.432262512709542 NA promoter-TSS (NM_019712) promoter-TSS (NM_019712) -550 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_69_49_0.200444823197834_5.74407860137364_0.432262512709542 chr1 134086260 134087063 + 0.432262512709542 NA Intergenic Intergenic -7506 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_59_57_-0.234503429501687_5.74072928037673_0.432262512709542-2 chr6 147196297 147197058 + 0.432262512709542 NA intron (NR_033640, intron 2 of 2) intron (NR_033640, intron 2 of 2) 16436 NR_033640 100039641 Mm.170402 NR_033640 ENSMUSG00000085600 E330012B07Rik Gm15768 RIKEN cDNA E330012B07 gene ncRNA common_peak1_68_49_0.179832714248985_5.73377254689922_0.432262512709542-4 chr5 24907997 24908716 + 0.432262512709542 NA exon (NM_001310480, exon 3 of 14) exon (NM_001310480, exon 3 of 14) 153 NM_001170556 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding common_peak2_59_57_-0.234503429501687_5.74072928037673_0.432262512709542 chr4 45320093 45320835 + 0.432262512709542 NA exon (NM_025513, exon 1 of 4) exon (NM_025513, exon 1 of 4) 139 NM_025513 66362 Mm.275788 NM_025513 ENSMUSG00000028322 Exosc3 2310005D06Rik|AI593501|Rrp40 exosome component 3 protein-coding common_peak1_69_49_0.200444823197834_5.74407860137364_0.432262512709542-4 chr2 173665092 173665910 + 0.432262512709542 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 5656 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_69_49_0.200444823197834_5.74407860137364_0.432262512709542-5 chr6 5297677 5298547 + 0.432262512709542 NA intron (NM_183308, intron 1 of 8) intron (NM_183308, intron 1 of 8) 261 NM_183308 330260 Mm.126984 NM_183308 ENSMUSG00000032667 Pon2 6330405I24Rik|AI481612 paraoxonase 2 protein-coding common_peak1_68_49_0.179832714248985_5.73377254689922_0.432262512709542-3 chr4 126102636 126103217 + 0.432262512709542 NA Intergenic Intergenic -1031 NM_028800 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_68_49_0.179832714248985_5.73377254689922_0.432262512709542 chr15 99362482 99363540 + 0.432262512709542 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 7471 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_59_57_-0.234503429501687_5.74072928037673_0.432262512709542 chr7 113259665 113260477 + 0.432262512709542 NA intron (NM_001243048, intron 2 of 16) intron (NM_001243048, intron 2 of 16) 52606 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_68_49_0.179832714248985_5.73377254689922_0.432262512709542-2 chr15 27417344 27418109 + 0.432262512709542 NA Intergenic Intergenic -48951 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_68_49_0.179832714248985_5.73377254689922_0.432262512709542 chr11 52004314 52005004 + 0.432262512709542 NA intron (NM_001166657, intron 1 of 7) intron (NM_001166657, intron 1 of 7) 438 NM_001166653 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding common_peak1_68_49_0.179832714248985_5.73377254689922_0.432262512709542-5 chr8 107150646 107151175 + 0.432262512709542 NA intron (NM_025558, intron 1 of 4) CpG 249 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak1_68_49_0.179832714248985_5.73377254689922_0.432262512709542-2 chr18 82692919 82693417 + 0.432262512709542 NA promoter-TSS (NM_177832) promoter-TSS (NM_177832) -434 NM_177832 329002 Mm.34438 NM_177832 ENSMUSG00000041258 Zfp236 AI447957|Gm335 zinc finger protein 236 protein-coding common_peak2_269_204_0.0986136910021047_7.7287869450065_0.432168897642155 chr15 79108344 79110076 + 0.432168897642155 NA 5' UTR (NM_177461, exon 1 of 16) 5' UTR (NM_177461, exon 1 of 16) 227 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding common_peak1_106_78_0.148385288852055_6.37797339260313_0.431920820308006-4 chr4 34613996 34615386 + 0.431920820308006 NA promoter-TSS (NM_181406) promoter-TSS (NM_181406) 251 NM_001159563 50793 Mm.399624 NM_015824 ENSMUSG00000040044 Orc3 Orc3l origin recognition complex, subunit 3 protein-coding common_peak2_106_78_0.148385288852055_6.37797339260313_0.431920820308006 chr16 33185110 33185921 + 0.431920820308006 NA 5' UTR (NM_176840, exon 1 of 13) 5' UTR (NM_176840, exon 1 of 13) 444 NM_176840 106326 Mm.486405 NM_176840 ENSMUSG00000022807 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 protein-coding common_peak1_106_78_0.148385288852055_6.37797339260313_0.431920820308006-2 chr17 63499321 63500664 + 0.431920820308006 NA exon (NM_015794, exon 1 of 9) exon (NM_015794, exon 1 of 9) 588 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak2_94_88_-0.193968057240617_6.37874940234609_0.431920820308006 chr15 97772305 97773645 + 0.431920820308006 NA Intergenic Intergenic -5309 NM_001357630 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_106_78_0.148385288852055_6.37797339260313_0.431920820308006-3 chr18 60890145 60891343 + 0.431920820308006 NA Intergenic Intergenic -21496 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak1_106_78_0.148385288852055_6.37797339260313_0.431920820308006 chr16 87782905 87784580 + 0.431920820308006 NA Intergenic Intergenic 84788 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak2_94_88_-0.193968057240617_6.37874940234609_0.431920820308006-2 chr7 99132157 99133142 + 0.431920820308006 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 8495 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak2_163_147_-0.145548777601756_7.13667897682807_0.431674072781311 chr8 122904768 122906467 + 0.431674072781311 NA intron (NR_037865, intron 4 of 13) intron (NR_037865, intron 4 of 13) 57243 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak2_179_134_0.120442591229264_7.13703689266546_0.431674072781311 chr15 89373285 89374570 + 0.431674072781311 NA promoter-TSS (NM_001111288) promoter-TSS (NM_001111288) -109 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-3 chr11 76588368 76588870 + 0.431536360747188 NA Intergenic B2_Mm2|SINE|B2 -10880 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188 chr3 145681350 145682147 + 0.431536360747188 NA Intergenic Intergenic -31763 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-13 chr4 55531476 55531993 + 0.431536360747188 NA exon (NM_010637, exon 2 of 5) exon (NM_010637, exon 2 of 5) 741 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-5 chr17 36032086 36032586 + 0.431536360747188 NA exon (NM_010398, exon 2 of 7) exon (NM_010398, exon 2 of 7) 365 NM_010398 15040 Mm.439648 NM_010398 ENSMUSG00000067212 H2-T23 37b|37c|H-2T23|H2-Qa1|Qa-1|Qa-1(b)|Qa1|Qed-1|T18c|T18c(37)|T23b|T23d histocompatibility 2, T region locus 23 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188 chr1 160212439 160212778 + 0.431536360747188 NA intron (NM_009786, intron 1 of 5) CpG 284 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-3 chr15 57906032 57906569 + 0.431536360747188 NA Intergenic Intergenic -5899 NM_001081396 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-4 chr14 28808532 28809183 + 0.431536360747188 NA Intergenic Intergenic -209351 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak1_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-2 chr13 48565981 48566312 + 0.431536360747188 NA Intergenic Intergenic -27874 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-3 chr11 8635178 8635775 + 0.431536360747188 NA intron (NM_001083587, intron 1 of 30) B1_Mus2|SINE|Alu 29059 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-7 chr6 8209399 8209654 + 0.431536360747188 NA intron (NM_145374, intron 1 of 11) CpG 299 NM_145374 252875 Mm.257151 NM_145374 ENSMUSG00000042447 Mios C81488 meiosis regulator for oocyte development protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-9 chr15 99973709 99974159 + 0.431536360747188 NA promoter-TSS (NR_028124) promoter-TSS (NR_028124) -647 NR_028124 70281 Mm.484037 NR_028124 ENSMUSG00000100084 2310068J16Rik - RIKEN cDNA 2310068J16 gene ncRNA common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-9 chr7 25279729 25280301 + 0.431536360747188 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) -2164 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-9 chr7 98309016 98309436 + 0.431536360747188 NA intron (NM_001360615, intron 1 of 10) CpG 316 NM_001360616 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca|aPHC alkaline ceramidase 3 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188 chr10 24463654 24464115 + 0.431536360747188 NA Intergenic Intergenic -131558 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-2 chr10 86219809 86220510 + 0.431536360747188 NA intron (NM_013722, intron 6 of 13) B2_Mm2|SINE|B2 -80253 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_32_33_-0.320396856852581_4.92726441282405_0.431536360747188 chr11 20955190 20955602 + 0.431536360747188 NA Intergenic Intergenic -124288 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-2 chr13 23561663 23562129 + 0.431536360747188 NA TTS (NM_178205) TTS (NM_178205) 469 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-4 chr15 101995761 101996193 + 0.431536360747188 NA TTS (NM_031170) TTS (NM_031170) 8365 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-6 chr13 45684507 45684944 + 0.431536360747188 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 177281 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-4 chr6 83027886 83028399 + 0.431536360747188 NA intron (NM_033079, intron 8 of 9) intron (NM_033079, intron 8 of 9) 5329 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-5 chr2 158166840 158167179 + 0.431536360747188 NA Intergenic Intergenic -20617 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-8 chr15 9070433 9070904 + 0.431536360747188 NA promoter-TSS (NM_001286255) promoter-TSS (NM_001286255) -592 NM_001286255 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-11 chr9 117962345 117962735 + 0.431536360747188 NA Intergenic Intergenic -77982 NM_001286507 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-8 chr7 90340653 90341066 + 0.431536360747188 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 38504 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-14 chr5 35687472 35687975 + 0.431536360747188 NA Intergenic Intergenic -7943 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-6 chr3 90476365 90476943 + 0.431536360747188 NA intron (NM_026374, intron 1 of 13) intron (NM_026374, intron 1 of 13) 453 NM_026374 67781 Mm.227258 NM_026374 ENSMUSG00000001016 Ilf2 6230405A16Rik|TEG-267|Tex261|Tex267 interleukin enhancer binding factor 2 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-2 chr10 77004622 77005102 + 0.431536360747188 NA Intergenic Intergenic -7133 NR_045882 100038479 Mm.387034 NR_045882 ENSMUSG00000074919 Gm10787 - predicted gene 10787 ncRNA common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-7 chr4 47353331 47353859 + 0.431536360747188 NA intron (NM_001312868, intron 1 of 8) CpG 373 NM_009370 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-4 chr11 115965222 115965561 + 0.431536360747188 NA 3' UTR (NM_020483, exon 11 of 11) 3' UTR (NM_020483, exon 11 of 11) -9334 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-12 chr9 110748214 110748561 + 0.431536360747188 NA Intergenic Intergenic -1242 NM_011199 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-12 chr4 26346402 26346856 + 0.431536360747188 NA promoter-TSS (NM_172865) promoter-TSS (NM_172865) 23 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-5 chr12 25095262 25095669 + 0.431536360747188 NA intron (NM_010496, intron 1 of 2) intron (NM_010496, intron 1 of 2) 627 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-11 chr9 50753849 50754632 + 0.431536360747188 NA intron (NM_009964, intron 1 of 2) intron (NM_009964, intron 1 of 2) 1269 NM_009964 12955 Mm.178 NM_009964 ENSMUSG00000032060 Cryab Crya-2|Crya2|HspB5|P23 crystallin, alpha B protein-coding common_peak1_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-3 chr13 81657698 81658170 + 0.431536360747188 NA 5' UTR (NM_030257, exon 1 of 3) 5' UTR (NM_030257, exon 1 of 3) 128 NM_030257 80289 Mm.259969 NM_030257 ENSMUSG00000035840 Lysmd3 1110030H10Rik|BC003322 LysM, putative peptidoglycan-binding, domain containing 3 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-10 chr9 41580634 41581064 + 0.431536360747188 NA promoter-TSS (NR_015483) promoter-TSS (NR_015483) -404 NR_015483 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-11 chr2 3284246 3284551 + 0.431536360747188 NA exon (NM_001290370, exon 1 of 12) exon (NM_001290370, exon 1 of 12) 186 NM_001290370 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-10 chr9 58308719 58309089 + 0.431536360747188 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 4308 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188-8 chr4 83417132 83417514 + 0.431536360747188 NA promoter-TSS (NR_152448) promoter-TSS (NR_152448) -401 NR_152449 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-7 chr14 25487812 25488131 + 0.431536360747188 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 28786 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_39_27_0.235287041340826_4.92499844272802_0.431536360747188 chr11 58979478 58979956 + 0.431536360747188 NA intron (NM_053168, intron 1 of 5) intron (NM_053168, intron 1 of 5) 1624 NM_053168 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-15 chr6 86365706 86366456 + 0.431536360747188 NA intron (NM_025591, intron 1 of 2) intron (NM_025591, intron 1 of 2) 398 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding common_peak2_32_33_-0.320396856852581_4.92726441282405_0.431536360747188-10 chr16 18066048 18066572 + 0.431536360747188 NA promoter-TSS (NM_001289813) promoter-TSS (NM_001289813) -93 NR_110380 13353 Mm.27155 NM_010047 ENSMUSG00000003531 Dgcr6 - DiGeorge syndrome critical region gene 6 protein-coding common_peak2_39_27_0.235287041340826_4.92499844272802_0.431536360747188-6 chr3 86920446 86920768 + 0.431536360747188 NA 5' UTR (NM_001195499, exon 1 of 18) 5' UTR (NM_001195499, exon 1 of 18) 277 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding common_peak1_76_72_-0.208990106708828_6.0853295055256_0.4314150221026 chr10 95940105 95941339 + 0.4314150221026 NA promoter-TSS (NM_001001932) promoter-TSS (NM_001001932) 59 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_76_72_-0.208990106708828_6.0853295055256_0.4314150221026-2 chr6 88518159 88518829 + 0.4314150221026 NA intron (NM_016906, intron 1 of 11) intron (NM_016906, intron 1 of 11) 306 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak1_87_63_0.172120423023816_6.08606021151191_0.4314150221026-2 chr5 140767666 140768468 + 0.4314150221026 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 43940 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding common_peak1_87_63_0.172120423023816_6.08606021151191_0.4314150221026 chr5 53589980 53591349 + 0.4314150221026 NA 5' UTR (NM_001080927, exon 1 of 11) 5' UTR (NM_001080927, exon 1 of 11) 178 NM_001080927 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_87_63_0.172120423023816_6.08606021151191_0.4314150221026 chrX 142965796 142966610 + 0.4314150221026 NA intron (NM_019496, intron 1 of 5) CpG 525 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak1_76_72_-0.208990106708828_6.0853295055256_0.4314150221026-2 chr9 106886331 106886990 + 0.4314150221026 NA TTS (NM_029103) TTS (NM_029103) 340 NM_175402 109095 Mm.431589 NM_175402 ENSMUSG00000074102 Rbm15b 1810017N16Rik RNA binding motif protein 15B protein-coding common_peak2_76_72_-0.208990106708828_6.0853295055256_0.4314150221026 chr16 37790452 37791075 + 0.4314150221026 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 13708 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak2_138_126_-0.161707635389079_6.90783086907763_0.431372681404792 chr8 110810162 110811452 + 0.431372681404792 NA 3' UTR (NM_133953, exon 26 of 26) 3' UTR (NM_133953, exon 26 of 26) -4883 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_164_148_-0.146555596457011_7.14589072223366_0.430750140476008 chr8 36640855 36641938 + 0.430750140476008 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -27453 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_130_96_0.142149466255263_6.67098757531476_0.430526003185906 chr7 89558594 89559734 + 0.430526003185906 NA Intergenic MIRb|SINE|MIR -31977 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak2_117_107_-0.162541396414033_6.67361680395645_0.430526003185906-3 chr7 79285750 79286715 + 0.430526003185906 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 12966 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_117_107_-0.162541396414033_6.67361680395645_0.430526003185906 chr11 32347845 32349036 + 0.430526003185906 NA intron (NM_177364, intron 1 of 12) intron (NM_177364, intron 1 of 12) 629 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding common_peak2_116_107_-0.17473310282669_6.66752095075012_0.430526003185906 chr15 25984448 25985423 + 0.430526003185906 NA exon (NM_144523, exon 1 of 6) exon (NM_144523, exon 1 of 6) 569 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak2_117_107_-0.162541396414033_6.67361680395645_0.430526003185906-2 chr13 38036738 38037992 + 0.430526003185906 NA promoter-TSS (NM_027724) promoter-TSS (NM_027724) 376 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 protein-coding common_peak1_116_107_-0.17473310282669_6.66752095075012_0.430526003185906 chr1 132352770 132353476 + 0.430526003185906 NA Intergenic Intergenic 14825 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_108_79_0.156766790241083_6.4003114900079_0.430360740609959-3 chr8 86901476 86902113 + 0.430360740609959 NA Intergenic Intergenic -16536 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_108_79_0.156766790241083_6.4003114900079_0.430360740609959 chr1 156673655 156675073 + 0.430360740609959 NA promoter-TSS (NM_023141) promoter-TSS (NM_023141) -25 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak2_95_89_-0.195087409030912_6.39430939181422_0.430360740609959 chr13 17695120 17695848 + 0.430360740609959 NA promoter-TSS (NM_138654) promoter-TSS (NM_138654) 71 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak2_108_79_0.156766790241083_6.4003114900079_0.430360740609959-2 chr3 38275691 38276966 + 0.430360740609959 NA Intergenic Intergenic -68209 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_95_89_-0.195087409030912_6.39430939181422_0.430360740609959-2 chr5 90875546 90876782 + 0.430360740609959 NA Intergenic Intergenic -15081 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding common_peak2_108_79_0.156766790241083_6.4003114900079_0.430360740609959 chr10 120227117 120228030 + 0.430360740609959 NA intron (NM_025431, intron 1 of 2) CpG 513 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding common_peak1_96_89_-0.180242541918597_6.40173182537038_0.430360740609959 chr13 17695097 17695866 + 0.430360740609959 NA promoter-TSS (NM_138654) promoter-TSS (NM_138654) 68 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak1_95_89_-0.195087409030912_6.39430939181422_0.430360740609959-2 chr4 123572507 123573646 + 0.430360740609959 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -43344 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_95_89_-0.195087409030912_6.39430939181422_0.430360740609959 chr16 91405673 91406821 + 0.430360740609959 NA promoter-TSS (NM_008349) promoter-TSS (NM_008349) 12 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_253_223_-0.116770280056931_7.74896978202914_0.43033820127561 chr19 6908237 6910899 + 0.43033820127561 NA promoter-TSS (NM_026306) promoter-TSS (NM_026306) -130 NM_001166370 67674 Mm.318804 NM_026306 ENSMUSG00000038812 Trmt112 0610038D11Rik|Trm112p tRNA methyltransferase 11-2 protein-coding common_peak1_193_172_-0.130072652798891_7.36959190123728_0.430041011972091 chr10 93640791 93642841 + 0.430041011972091 NA intron (NM_021320, intron 1 of 9) intron (NM_021320, intron 1 of 9) 767 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding common_peak2_288_252_-0.107481863385692_7.92925264300146_0.42991768330309 chr10 28074261 28076444 + 0.42991768330309 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 532 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak1_60_58_-0.235486980058965_5.76489955933236_0.429827778234683 chr1 71651357 71651978 + 0.429827778234683 NA intron (NM_001276412, intron 1 of 44) intron (NM_001276412, intron 1 of 44) 1567 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak2_60_58_-0.235486980058965_5.76489955933236_0.429827778234683 chr11 86962102 86963103 + 0.429827778234683 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 31160 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak2_60_58_-0.235486980058965_5.76489955933236_0.429827778234683-3 chr18 52465683 52466425 + 0.429827778234683 NA intron (NM_026040, intron 1 of 7) intron (NM_026040, intron 1 of 7) 361 NM_026040 67222 Mm.100617 NM_026040 ENSMUSG00000024528 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 protein-coding common_peak1_60_58_-0.235486980058965_5.76489955933236_0.429827778234683-2 chr2 180232509 180233152 + 0.429827778234683 NA Intergenic Intergenic -6971 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_60_58_-0.235486980058965_5.76489955933236_0.429827778234683-5 chr8 64690998 64691850 + 0.429827778234683 NA intron (NM_013494, intron 1 of 8) (TAA)n|Simple_repeat|Simple_repeat 1685 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_60_58_-0.235486980058965_5.76489955933236_0.429827778234683-4 chr7 16924290 16924625 + 0.429827778234683 NA promoter-TSS (NM_007590) promoter-TSS (NM_007590) -425 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|Cam3|Camc|R75142 calmodulin 3 protein-coding common_peak2_60_58_-0.235486980058965_5.76489955933236_0.429827778234683-2 chr15 98180262 98181151 + 0.429827778234683 NA Intergenic Intergenic 12900 NM_177716 239650 Mm.54140 NM_177716 ENSMUSG00000029875 Ccdc184 5630400A08|AI836003 coiled-coil domain containing 184 protein-coding common_peak1_70_50_0.192195399735236_5.76852304183911_0.429827778234671 chr9 47444837 47445466 + 0.429827778234671 NA Intergenic Intergenic -85019 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak2_70_50_0.192195399735236_5.76852304183911_0.429827778234671-2 chr18 61058702 61059847 + 0.429827778234671 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 14124 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak2_70_50_0.192195399735236_5.76852304183911_0.429827778234671 chr13 40917072 40917928 + 0.429827778234671 NA promoter-TSS (NM_133219) promoter-TSS (NM_133219) -134 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak2_70_50_0.192195399735236_5.76852304183911_0.429827778234671-3 chr9 47444843 47445427 + 0.429827778234671 NA Intergenic Intergenic -85035 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak2_255_224_-0.111961065292219_7.75780065857093_0.429739277568634 chr8 4676966 4679204 + 0.429739277568634 NA Intergenic CpG 64915 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak2_77_73_-0.210134568519626_6.10438608136914_0.429508824963706 chr9 106170887 106171471 + 0.429508824963706 NA 5' UTR (NM_029896, exon 1 of 9) 5' UTR (NM_029896, exon 1 of 9) 250 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak1_88_64_0.165939413371473_6.10533751971419_0.429508824963706-2 chr7 45457980 45459259 + 0.429508824963706 NA exon (NM_010240, exon 3 of 4) exon (NM_010240, exon 3 of 4) 1267 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding common_peak1_88_64_0.165939413371473_6.10533751971419_0.429508824963706 chr18 61054344 61055194 + 0.429508824963706 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 9619 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-9 chr5 123394837 123395453 + 0.429377759889511 NA exon (NM_177582, exon 1 of 9) exon (NM_177582, exon 1 of 9) 347 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-2 chr15 27630278 27630668 + 0.429377759889511 NA exon (NM_001013792, exon 1 of 7) exon (NM_001013792, exon 1 of 7) 220 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-2 chr6 48840269 48841015 + 0.429377759889511 NA promoter-TSS (NM_025326) promoter-TSS (NM_025326) 346 NM_023056 65963 Mm.28385 NM_023056 ENSMUSG00000029810 Tmem176b 1810009M01Rik|Clast1|Lr8 transmembrane protein 176B protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-7 chr2 164432012 164432371 + 0.429377759889511 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 10997 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-8 chr4 130036064 130036986 + 0.429377759889511 NA Intergenic Intergenic -11315 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak1_54_38_0.21343008248869_5.39211726010659_0.429377759889511-4 chr7 142533168 142533785 + 0.429377759889511 NA intron (NM_011288, intron 1 of 4) intron (NM_011288, intron 1 of 4) 359 NM_011288 19935 Mm.12144 NM_011288 ENSMUSG00000037772 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-5 chr19 28298364 28299205 + 0.429377759889511 NA exon (NM_001305671, exon 7 of 10) exon (NM_001305671, exon 7 of 10) -287618 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511 chr13 114387615 114388372 + 0.429377759889511 NA exon (NM_010887, exon 1 of 5) exon (NM_010887, exon 1 of 5) 101 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-6 chr2 157447154 157448019 + 0.429377759889511 NA intron (NM_001025395, intron 2 of 13) intron (NM_001025395, intron 2 of 13) 23293 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-3 chr15 66968998 66969540 + 0.429377759889511 NA intron (NM_008681, intron 1 of 15) CpG 372 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding common_peak1_54_38_0.21343008248869_5.39211726010659_0.429377759889511-2 chr19 60755964 60756595 + 0.429377759889511 NA exon (NM_178421, exon 1 of 1) exon (NM_178421, exon 1 of 1) 292 NM_178421 332397 Mm.186390 NM_178421 ENSMUSG00000072437 Nanos1 NOS-1 nanos C2HC-type zinc finger 1 protein-coding common_peak1_45_45_-0.280708654260758_5.38320762892663_0.429377759889511 chr5 32192428 32192796 + 0.429377759889511 NA Intergenic Intergenic -40096 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_54_38_0.21343008248869_5.39211726010659_0.429377759889511-3 chr7 74346471 74347038 + 0.429377759889511 NA exon (NM_023908, exon 4 of 10) exon (NM_023908, exon 4 of 10) 208026 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_54_38_0.21343008248869_5.39211726010659_0.429377759889511 chr2 131903122 131903610 + 0.429377759889511 NA Intergenic B1F|SINE|Alu -6562 NM_011170 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding common_peak1_54_38_0.21343008248869_5.39211726010659_0.429377759889511 chr12 110207097 110207498 + 0.429377759889511 NA Intergenic Intergenic -49224 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak2_45_45_-0.280708654260758_5.38320762892663_0.429377759889511-4 chr16 64770245 64770895 + 0.429377759889511 NA intron (NM_026273, intron 1 of 2) CpG 369 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak2_242_183_0.103601119724812_7.57536251591942_0.429299703681598 chr19 55710763 55712820 + 0.429299703681598 NA Intergenic Intergenic -9587 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_224_198_-0.119709533509675_7.57676985378881_0.429299703681549 chr2 83723765 83726136 + 0.429299703681549 NA intron (NM_008402, intron 1 of 29) CpG 553 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_212_159_0.116473269473579_7.38016472962415_0.429263374599156 chr13 103919167 103921122 + 0.429263374599156 NA intron (NM_001005868, intron 1 of 26) intron (NM_001005868, intron 1 of 26) 442 NM_001289473 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak2_211_159_0.109732001236009_7.37679409550537_0.429263374599156 chr8 88361186 88362227 + 0.429263374599156 NA exon (NM_012047, exon 2 of 17) exon (NM_012047, exon 2 of 17) 485 NM_012047 26992 Mm.5400 NM_012047 ENSMUSG00000031660 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 protein-coding common_peak2_131_97_0.138246181136061_6.68383293468324_0.429261406766816-2 chr6 125164026 125165360 + 0.429261406766816 NA intron (NM_001289726, intron 2 of 6) intron (NM_001289726, intron 2 of 6) 1080 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak2_131_97_0.138246181136061_6.68383293468324_0.429261406766816 chr17 35000852 35002020 + 0.429261406766816 NA promoter-TSS (NM_033075) promoter-TSS (NM_033075) 529 NM_011690 22321 Mm.28420 NM_011690 ENSMUSG00000007029 Vars Bat6|D17H6S56E|G7a|Vars2 valyl-tRNA synthetase protein-coding common_peak1_131_97_0.138246181136061_6.68383293468324_0.429261406766816 chr18 56572351 56573800 + 0.429261406766816 NA promoter-TSS (NM_001127338) promoter-TSS (NM_001127338) -136 NM_001127338 110695 Mm.30250 NM_138600 ENSMUSG00000053644 Aldh7a1 Atq1|D18Wsu181e aldehyde dehydrogenase family 7, member A1 protein-coding common_peak1_118_108_-0.163749397439588_6.68630962605713_0.429261406766792 chr1 16655812 16657170 + 0.429261406766792 NA intron (NM_001310470, intron 1 of 4) intron (NM_001310470, intron 1 of 4) 374 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak2_118_108_-0.163749397439588_6.68630962605713_0.429261406766792 chr9 44920109 44921216 + 0.429261406766792 NA promoter-TSS (NM_013795) promoter-TSS (NM_013795) 80 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak2_156_116_0.131052591441001_6.93589101530391_0.429234176275016 chr11 98941020 98942883 + 0.429234176275016 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 2240 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_156_116_0.131052591441001_6.93589101530391_0.429234176275016 chr6 31078842 31080660 + 0.429234176275016 NA Intergenic Intergenic -16658 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_141_128_-0.153661493289766_6.93439650877837_0.429234176275016 chr5 30906221 30907699 + 0.429234176275016 NA TTS (NR_122117) TTS (NR_122117) 828 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak2_109_80_0.15192731889307_6.41581366233116_0.428837433128869 chr7 25686997 25688329 + 0.428837433128869 NA 5' UTR (NM_011577, exon 1 of 7) 5' UTR (NM_011577, exon 1 of 7) 661 NM_011577 21803 Mm.248380 NM_011577 ENSMUSG00000002603 Tgfb1 TGF-beta1|TGFbeta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 protein-coding common_peak1_109_80_0.15192731889307_6.41581366233116_0.428837433128869 chr18 84677011 84677938 + 0.428837433128869 NA intron (NM_023149, intron 4 of 11) intron (NM_023149, intron 4 of 11) 4585 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak2_97_90_-0.181491476405886_6.41704890199575_0.428837433128845-2 chr3 90051685 90052510 + 0.428837433128845 NA promoter-TSS (NM_027500) promoter-TSS (NM_027500) 383 NM_001165983 74383 Mm.25610 NM_028475 ENSMUSG00000042520 Ubap2l 3110083O19Rik|4932431F02Rik|A430103N23Rik|C77168|Nice-4|mKIAA0144 ubiquitin-associated protein 2-like protein-coding common_peak2_97_90_-0.181491476405886_6.41704890199575_0.428837433128845 chr16 45890594 45892085 + 0.428837433128845 NA Intergenic Intergenic -46588 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_257_226_-0.113580314000517_7.76975833029066_0.428557925491865 chr8 126826574 126827982 + 0.428557925491865 NA Intergenic Intergenic -21742 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_407_351_-0.0899300977931219_8.41446656974074_0.428407342047367 chr8 71379832 71382667 + 0.428407342047367 NA exon (NM_010150, exon 1 of 4) exon (NM_010150, exon 1 of 4) 703 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak2_168_151_-0.141001167897643_7.17742692949476_0.428055150551394 chr15 36607689 36608920 + 0.428055150551394 NA intron (NM_008774, intron 1 of 14) CpG 669 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_119_109_-0.164937127472019_6.69889114978865_0.428021281918605 chr9 44767097 44767797 + 0.428021281918605 NA intron (NM_145985, intron 1 of 9) CpG 361 NM_145985 213827 Mm.371682 NM_145985 ENSMUSG00000032096 Arcn1 4632432M07Rik|nur17 archain 1 protein-coding common_peak1_133_98_0.145141417987534_6.70192732907338_0.428021281918605 chr17 48408319 48409598 + 0.428021281918605 NA intron (NM_001110832, intron 1 of 9) intron (NM_001110832, intron 1 of 9) 862 NM_001110832 18044 Mm.4929 NM_010913 ENSMUSG00000023994 Nfya AA407810|Cbf-b|SEZ-10|SEZ10 nuclear transcription factor-Y alpha protein-coding common_peak2_245_185_0.105581379146617_7.59194950068134_0.427966352877545 chr8 11633841 11635736 + 0.427966352877545 NA TTS (NR_106097) TTS (NR_106097) 248 NR_030781 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak2_245_185_0.105581379146617_7.59194950068134_0.427966352877545-2 chr8 120536211 120538556 + 0.427966352877545 NA promoter-TSS (NM_001145896) promoter-TSS (NM_001145896) -26 NM_001145896 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_392_300_0.082223254336899_8.27473130392815_0.427689879354719 chr15 85670943 85674434 + 0.427689879354719 NA Intergenic Intergenic -31085 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_78_74_-0.211251024220604_6.12319317838558_0.427657599516012 chr13 23585065 23585904 + 0.427657599516012 NA TTS (NM_001290530) TTS (NM_001290530) 486 NM_001290530 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak1_89_65_0.159919048494886_6.1243536436059_0.427657599516012 chr10 29143351 29144867 + 0.427657599516012 NA 5' UTR (NM_026138, exon 1 of 7) 5' UTR (NM_026138, exon 1 of 7) 113 NM_026138 67412 Mm.390264 NM_026138 ENSMUSG00000038916 Soga3 6330407J23Rik SOGA family member 3 protein-coding common_peak1_78_74_-0.211251024220604_6.12319317838558_0.427657599516012 chr4 141278445 141279048 + 0.427657599516012 NA intron (NR_151527, intron 1 of 1) intron (NR_151527, intron 1 of 1) 307 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak2_78_74_-0.211251024220604_6.12319317838558_0.427657599516012-3 chr5 76140313 76141445 + 0.427657599516012 NA intron (NM_020611, intron 1 of 5) intron (NM_020611, intron 1 of 5) 606 NM_020611 57357 Mm.289446 NM_020611 ENSMUSG00000029233 Srd5a3 1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l steroid 5 alpha-reductase 3 protein-coding common_peak2_78_74_-0.211251024220604_6.12319317838558_0.427657599516012-2 chr2 118111954 118113384 + 0.427657599516012 NA exon (NM_011580, exon 2 of 22) exon (NM_011580, exon 2 of 22) 793 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-7 chr17 66844571 66844859 + 0.427564438475253 NA intron (NM_001357625, intron 15 of 32) intron (NM_001357625, intron 15 of 32) 130259 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-9 chr5 3346042 3346478 + 0.427564438475253 NA intron (NM_009873, intron 2 of 7) intron (NM_009873, intron 2 of 7) 2367 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-11 chr4 150008710 150008955 + 0.427564438475253 NA 5' UTR (NM_173371, exon 1 of 5) 5' UTR (NM_173371, exon 1 of 5) 191 NM_173371 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-4 chr12 24498280 24498856 + 0.427564438475253 NA promoter-TSS (NR_028341) promoter-TSS (NR_028341) -13 NM_020614 21340 Mm.39082 NM_020614 ENSMUSG00000059669 Taf1b 4930408G01Rik|A230108M10Rik|TAFI68|Tafi86|p63 TATA-box binding protein associated factor, RNA polymerase I, B protein-coding unique_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253 chr4 103313880 103314199 + 0.427564438475253 NA intron (NM_025909, intron 1 of 8) CpG 193 NM_025909 67013 Mm.30021 NM_025909 ENSMUSG00000035069 Oma1 2010001O09Rik|MPRP-1|ZMPOMA1 OMA1 zinc metallopeptidase protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-2 chr10 17035443 17036073 + 0.427564438475253 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 60024 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-4 chr11 74832546 74832795 + 0.427564438475253 NA intron (NM_010813, intron 1 of 5) intron (NM_010813, intron 1 of 5) 1746 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-7 chr14 117930171 117930433 + 0.427564438475253 NA intron (NM_001079844, intron 7 of 9) intron (NM_001079844, intron 7 of 9) 23545 NR_105747 102465148 NR_105747 ENSMUSG00000098648 Mir6239 Gm28025|mmu-mir-6239 microRNA 6239 ncRNA common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-14 chr8 106415375 106415614 + 0.427564438475253 NA 5' UTR (NM_011764, exon 1 of 4) 5' UTR (NM_011764, exon 1 of 4) 155 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-12 chr3 101924047 101924381 + 0.427564438475253 NA 5' UTR (NM_001039371, exon 1 of 12) 5' UTR (NM_001039371, exon 1 of 12) 239 NM_001039371 242126 Mm.90204 NM_001039371 ENSMUSG00000033147 Slc22a15 2610034P21Rik|4930477M19|A530052I06Rik|BB219042 solute carrier family 22 (organic anion/cation transporter), member 15 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-18 chr8 106517830 106518165 + 0.427564438475253 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 7145 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-5 chr13 52676171 52676609 + 0.427564438475253 NA Intergenic MTE2b|LTR|ERVL-MaLR 79508 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-10 chr5 131307532 131308032 + 0.427564438475253 NA promoter-TSS (NM_145218) promoter-TSS (NM_145218) -260 NM_145218 212996 Mm.299204 NM_145218 ENSMUSG00000034040 Wbscr17 AA388321|E330012B09Rik|Galnt17 Williams-Beuren syndrome chromosome region 17 homolog (human) protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-9 chr2 32883146 32883642 + 0.427564438475253 NA intron (NM_146119, intron 1 of 13) ID_B1|SINE|B4 7260 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-2 chr1 155090636 155091408 + 0.427564438475253 NA Intergenic Intergenic -7758 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-6 chr13 53034030 53034501 + 0.427564438475253 NA Intergenic Intergenic -53226 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-3 chr11 45955234 45955518 + 0.427564438475253 NA promoter-TSS (NM_001290737) promoter-TSS (NM_001290737) 127 NM_001080969 66628 Mm.269083 NM_001080969 ENSMUSG00000011254 Thg1l - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-12 chr7 126777024 126777323 + 0.427564438475253 NA 5' UTR (NM_026875, exon 1 of 5) 5' UTR (NM_026875, exon 1 of 5) 198 NM_025347 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee like 3 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-13 chr5 151705644 151706181 + 0.427564438475253 NA Intergenic Intergenic -54704 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-4 chr11 113064187 113064574 + 0.427564438475253 NA intron (NR_015556, intron 2 of 2) intron (NR_015556, intron 2 of 2) 137458 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-2 chr7 128530315 128530550 + 0.427564438475253 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 6849 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-9 chr19 28363089 28363526 + 0.427564438475253 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -314917 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-5 chr12 100520181 100520517 + 0.427564438475253 NA intron (NM_001033213, intron 1 of 19) CpG 473 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-17 chr8 71676342 71676649 + 0.427564438475253 NA 5' UTR (NM_010589, exon 1 of 25) 5' UTR (NM_010589, exon 1 of 25) 112 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-14 chr8 45649692 45650272 + 0.427564438475253 NA intron (NM_001310707, intron 1 of 23) intron (NM_001310707, intron 1 of 23) -12011 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-3 chr10 99063111 99063430 + 0.427564438475253 NA Intergenic Intergenic -43812 NM_027740 382406 Mm.440656 NM_027740 ENSMUSG00000019952 Poc1b 4933430F16Rik|Wdr51b POC1 centriolar protein B protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-11 chr7 31149658 31150147 + 0.427564438475253 NA intron (NR_153431, intron 1 of 18) intron (NR_153431, intron 1 of 18) 1269 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-14 chr6 86899430 86899885 + 0.427564438475253 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 50140 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-14 chr6 91203002 91203266 + 0.427564438475253 NA Intergenic Intergenic -9630 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-6 chr17 6979005 6979280 + 0.427564438475253 NA intron (NM_026611, intron 1 of 8).2 intron (NM_026611, intron 1 of 8).2 282 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253 chr1 62727986 62728297 + 0.427564438475253 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 24824 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-3 chr11 103049337 103049968 + 0.427564438475253 NA intron (NM_008707, intron 3 of 11) intron (NM_008707, intron 3 of 11) 21109 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253 chr1 91278787 91279177 + 0.427564438475253 NA intron (NM_001355764, intron 8 of 10) intron (NM_001355764, intron 8 of 10) -19356 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-14 chr7 144648083 144648455 + 0.427564438475253 NA intron (NM_001242349, intron 7 of 24) intron (NM_001242349, intron 7 of 24) -65833 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-11 chr3 21950792 21951083 + 0.427564438475253 NA Intergenic Intergenic -125715 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-3 chr11 69795678 69795903 + 0.427564438475253 NA TTS (NM_001291104) TTS (NM_001291104) 147 NM_009601 11443 Mm.86425 NM_009601 ENSMUSG00000041189 Chrnb1 Achr-2|Acrb cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-2 chr10 75667618 75667955 + 0.427564438475253 NA intron (NM_172549, intron 29 of 36) CpG -23778 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-12 chr6 88774767 88775312 + 0.427564438475253 NA intron (NM_001166249, intron 3 of 7) intron (NM_001166249, intron 3 of 7) 50335 NM_001166251 23945 Mm.272197 NM_011844 ENSMUSG00000033174 Mgll AA589436|Magl|Mgl monoglyceride lipase protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253 chr10 24444637 24445108 + 0.427564438475253 NA Intergenic Intergenic -150570 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-7 chr19 43939812 43940031 + 0.427564438475253 NA intron (NM_028029, intron 1 of 15) CpG 277 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-5 chr16 16592957 16593283 + 0.427564438475253 NA intron (NM_001301817, intron 1 of 16) intron (NM_001301817, intron 1 of 16) 6858 NM_001301817 224014 Mm.256131 NM_139232 ENSMUSG00000022788 Fgd4 9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-10 chr6 83165653 83165857 + 0.427564438475253 NA promoter-TSS (NM_001198866) promoter-TSS (NM_001198866) -169 NM_001198866 13191 Mm.6919 NM_007835 ENSMUSG00000031865 Dctn1 AL022633|DAP-150|DP-150|Glued|p150|p150-glued|p150 dynactin 1 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-6 chr13 113552373 113552877 + 0.427564438475253 NA Intergenic Intergenic -49781 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-10 chr2 75688574 75689026 + 0.427564438475253 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 15863 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-7 chr3 123338445 123338956 + 0.427564438475253 NA intron (NM_027135, intron 11 of 22) intron (NM_027135, intron 11 of 22) 47290 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-10 chr2 155819451 155819876 + 0.427564438475253 NA promoter-TSS (NR_015528) promoter-TSS (NR_015528) -460 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-19 chr9 102746374 102746741 + 0.427564438475253 NA intron (NR_033301, intron 1 of 3) intron (NR_033301, intron 1 of 3) 6909 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-13 chr4 133070515 133070765 + 0.427564438475253 NA intron (NM_146155, intron 6 of 6) intron (NM_146155, intron 6 of 6) 59134 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-13 chr7 137001747 137002191 + 0.427564438475253 NA intron (NM_008598, intron 2 of 4) intron (NM_008598, intron 2 of 4) 107358 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253 chr1 132331065 132331420 + 0.427564438475253 NA intron (NM_001195025, intron 7 of 7) intron (NM_001195025, intron 7 of 7) 15117 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-2 chr15 80797910 80798389 + 0.427564438475253 NA promoter-TSS (NM_177124) promoter-TSS (NM_177124) -461 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-6 chr18 40219012 40219304 + 0.427564438475253 NA intron (NM_023311, intron 1 of 5) CpG 241 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-8 chr4 89479472 89479723 + 0.427564438475253 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -168565 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-8 chr4 137476529 137477051 + 0.427564438475253 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 7987 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-20 chr9 104901454 104901780 + 0.427564438475253 NA intron (NM_028719, intron 5 of 15) intron (NM_028719, intron 5 of 15) -151651 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-11 chr3 93023947 93024212 + 0.427564438475253 NA Intergenic Intergenic -5018 NM_001355725 66203 Mm.292457 NM_025420 ENSMUSG00000027912 Lce1m 1110059L13Rik|AI131654|Lce5a|Sprrl10 late cornified envelope 1M protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-8 chr17 74717839 74718236 + 0.427564438475253 NA intron (NM_152817, intron 1 of 19) intron (NM_152817, intron 1 of 19) 287 NM_152817 74196 Mm.209503 NM_152817 ENSMUSG00000024078 Ttc27 2610511O17Rik tetratricopeptide repeat domain 27 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-9 chr5 124861813 124862341 + 0.427564438475253 NA promoter-TSS (NM_001081750) promoter-TSS (NM_001081750) 144 NM_144819 215707 Mm.389693 NM_144819 ENSMUSG00000037979 Ccdc92 AW050178|D5Bwg0834e coiled-coil domain containing 92 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-12 chr5 92816868 92817339 + 0.427564438475253 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 7721 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-5 chr15 80028816 80029146 + 0.427564438475253 NA Intergenic Intergenic -14173 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-4 chr13 40720760 40721350 + 0.427564438475253 NA intron (NM_001122948, intron 5 of 6) intron (NM_001122948, intron 5 of 6) -6753 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-13 chr5 145166745 145167011 + 0.427564438475253 NA promoter-TSS (NM_001291248) promoter-TSS (NM_001291248) 226 NM_133735 71799 Mm.277413 NM_133735 ENSMUSG00000029624 Ptcd1 1110069M14Rik pentatricopeptide repeat domain 1 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-5 chr2 57114608 57115043 + 0.427564438475253 NA 5' UTR (NM_013613, exon 1 of 8) 5' UTR (NM_013613, exon 1 of 8) 213 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-9 chr15 102922573 102922827 + 0.427564438475253 NA intron (NM_010464, intron 1 of 1) intron (NM_010464, intron 1 of 1) 1569 NM_010464 15422 Mm.207062 NM_010464 ENSMUSG00000001655 Hoxc13 - homeobox C13 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-8 chr17 78401850 78402161 + 0.427564438475253 NA intron (NM_001360407, intron 4 of 9) intron (NM_001360407, intron 4 of 9) 16147 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-15 chr6 108213272 108213627 + 0.427564438475253 NA intron (NM_010585, intron 1 of 61) intron (NM_010585, intron 1 of 61) 353 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-11 chr5 136053965 136054794 + 0.427564438475253 NA Intergenic ZP3AR|Satellite|Satellite -2888 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-2 chr10 24574073 24574301 + 0.427564438475253 NA Intergenic Intergenic -21255 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253 chr13 60427957 60428394 + 0.427564438475253 NA Intergenic Intergenic -173772 NM_001285917 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding common_peak1_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-12 chr5 113629702 113629954 + 0.427564438475253 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 13775 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-10 chr2 165034400 165034774 + 0.427564438475253 NA intron (NM_144892, intron 1 of 7) CpG 192 NM_144892 228869 Mm.233080 NM_144892 ENSMUSG00000039804 Ncoa5 CIA nuclear receptor coactivator 5 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-6 chr3 121425799 121426175 + 0.427564438475253 NA promoter-TSS (NM_028044) promoter-TSS (NM_028044) -554 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-4 chr11 120956875 120957408 + 0.427564438475253 NA intron (NM_001038653, intron 5 of 5) intron (NM_001038653, intron 5 of 5) 8074 NM_001038654 80879 Mm.28632 NM_030696 ENSMUSG00000025161 Slc16a3 Mct3|Mct4 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-15 chrX 12937189 12937672 + 0.427564438475253 NA exon (NM_001272033, exon 1 of 1) exon (NM_001272033, exon 1 of 1) 557 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding unique_peak2_22_24_-0.393947908405226_4.44688223557211_0.427564438475253-3 chr9 120128644 120129122 + 0.427564438475253 NA intron (NM_011029, intron 2 of 6) intron (NM_011029, intron 2 of 6) 1117 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253 chr1 52113330 52113671 + 0.427564438475253 NA Intergenic Intergenic -5938 NM_001357627 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-2 chr11 95074818 95075355 + 0.427564438475253 NA intron (NM_013565, intron 1 of 25) intron (NM_013565, intron 1 of 25) 1628 NM_013565 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-16 chr8 34225590 34225883 + 0.427564438475253 NA Intergenic Intergenic -59024 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-13 chr7 128298011 128298418 + 0.427564438475253 NA promoter-TSS (NM_145590) promoter-TSS (NM_145590) -83 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding unique_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-3 chr11 117810689 117811030 + 0.427564438475253 NA intron (NM_009304, intron 1 of 3) intron (NM_009304, intron 1 of 3) 1192 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak1_28_19_0.260039906063148_4.45194804791894_0.427564438475253-7 chr15 80816254 80816635 + 0.427564438475253 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 17834 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_28_19_0.260039906063148_4.45194804791894_0.427564438475253-8 chr15 76206109 76206484 + 0.427564438475253 NA promoter-TSS (NM_001163540) promoter-TSS (NM_001163540) 25 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_61_59_-0.236441056055737_5.78867006758065_0.427481819178421-3 chr16 11202578 11203290 + 0.427481819178421 NA promoter-TSS (NR_038156) promoter-TSS (NR_038156) 358 NM_025546 66409 Mm.28291 NM_025546 ENSMUSG00000005846 Rsl1d1 2410005K20Rik|C76439|pBK1 ribosomal L1 domain containing 1 protein-coding common_peak1_61_59_-0.236441056055737_5.78867006758065_0.427481819178421 chr14 20479069 20479711 + 0.427481819178421 NA intron (NM_001110794, intron 1 of 12) intron (NM_001110794, intron 1 of 12) 743 NM_001110794 11750 Mm.280231 NM_009674 ENSMUSG00000021814 Anxa7 AI265384|AI316497|Anx7|synexin annexin A7 protein-coding common_peak2_61_59_-0.236441056055737_5.78867006758065_0.427481819178421 chr1 71691902 71692428 + 0.427481819178421 NA Intergenic Intergenic 38830 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak2_61_59_-0.236441056055737_5.78867006758065_0.427481819178421-2 chr11 97807656 97808087 + 0.427481819178421 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 8306 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_71_51_0.184216550958369_5.79254799362028_0.427481819178421-2 chr2 151961518 151962304 + 0.427481819178421 NA Intergenic Intergenic 5706 NR_035478 100316704 NR_035478 ENSMUSG00000088491 Mir1953 mir-1953|mmu-mir-1953 microRNA 1953 ncRNA common_peak1_61_59_-0.236441056055737_5.78867006758065_0.427481819178421-2 chr2 32914384 32914978 + 0.427481819178421 NA intron (NM_146119, intron 5 of 13) intron (NM_146119, intron 5 of 13) 38547 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_71_51_0.184216550958369_5.79254799362028_0.427481819178421-3 chr8 90908713 90909357 + 0.427481819178421 NA intron (NM_177224, intron 2 of 39) CpG -23214 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_71_51_0.184216550958369_5.79254799362028_0.427481819178421 chr8 90908706 90909361 + 0.427481819178421 NA intron (NM_177224, intron 2 of 39) CpG -23216 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_71_51_0.184216550958369_5.79254799362028_0.427481819178421 chr11 88618146 88619319 + 0.427481819178421 NA promoter-TSS (NR_131025) promoter-TSS (NR_131025) -519 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_110_81_0.147189359093569_6.43114668416487_0.427349612160519-2 chr3 98375295 98376061 + 0.427349612160519 NA Intergenic Intergenic -6803 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_110_81_0.147189359093569_6.43114668416487_0.427349612160519-3 chrX 96134223 96135214 + 0.427349612160519 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 38673 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_110_81_0.147189359093569_6.43114668416487_0.427349612160519-2 chr19 8801913 8803426 + 0.427349612160519 NA 5' UTR (NM_001098237, exon 1 of 2) 5' UTR (NM_001098237, exon 1 of 2) 139 NM_001098237 75291 Mm.23423 NM_133759 ENSMUSG00000071661 Zbtb3 4930563M09Rik zinc finger and BTB domain containing 3 protein-coding common_peak1_110_81_0.147189359093569_6.43114668416487_0.427349612160519 chr1 71937802 71939023 + 0.427349612160519 NA Intergenic Intergenic 50300 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_98_91_-0.182715349005044_6.43220428155449_0.427349612160519 chr10 44003034 44004437 + 0.427349612160519 NA exon (NM_172393, exon 1 of 20) exon (NM_172393, exon 1 of 20) 1111 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Crybg1 AI462491|AI463325|Aim1 crystallin beta-gamma domain containing 1 protein-coding common_peak2_98_91_-0.182715349005044_6.43220428155449_0.427349612160519 chr4 108619397 108620601 + 0.427349612160519 NA promoter-TSS (NM_177045) promoter-TSS (NM_177045) 43 NM_177045 319965 Mm.151129 NM_177045 ENSMUSG00000028582 Cc2d1b A830039B04Rik|Freud2 coiled-coil and C2 domain containing 1B protein-coding common_peak2_110_81_0.147189359093569_6.43114668416487_0.427349612160519 chr17 64331324 64331874 + 0.427349612160519 NA intron (NM_001025309, intron 1 of 9) CpG 284 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894-2 chr11 76027233 76027680 + 0.427313034957894 NA exon (NM_029658, exon 1 of 3) exon (NM_029658, exon 1 of 3) 326 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding common_peak2_40_28_0.22003355204611_4.96799777115063_0.427313034957894-4 chr8 126810842 126811088 + 0.427313034957894 NA Intergenic Intergenic -38055 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894-4 chr12 50545257 50545720 + 0.427313034957894 NA intron (NM_008858, intron 1 of 18) intron (NM_008858, intron 1 of 18) 103735 NM_008858 18760 Mm.133719 NM_008858 ENSMUSG00000002688 Prkd1 PKD|PKD1|Pkcm|Prkcm protein kinase D1 protein-coding common_peak2_40_28_0.22003355204611_4.96799777115063_0.427313034957894-3 chr3 83862741 83863443 + 0.427313034957894 NA Intergenic Intergenic -21484 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak2_40_28_0.22003355204611_4.96799777115063_0.427313034957894 chr15 53139128 53139571 + 0.427313034957894 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 206834 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_40_28_0.22003355204611_4.96799777115063_0.427313034957894-2 chr2 90584223 90584741 + 0.427313034957894 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -3835 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894-7 chr9 106891525 106891860 + 0.427313034957894 NA intron (NM_029103, intron 1 of 3) CpG 246 NM_029103 74840 Mm.29778 NM_029103 ENSMUSG00000032575 Manf 3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17 mesencephalic astrocyte-derived neurotrophic factor protein-coding common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894-3 chr11 101301969 101302248 + 0.427313034957894 NA intron (NM_001359819, intron 1 of 10) CpG 178 NM_019584 56208 Mm.178947 NM_019584 ENSMUSG00000035086 Becn1 Atg6 beclin 1, autophagy related protein-coding common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894-5 chr3 70804231 70804846 + 0.427313034957894 NA intron (NR_040556, intron 1 of 3) intron (NR_040556, intron 1 of 3) 2753 NR_040556 625901 Mm.366028 NR_040556 ENSMUSG00000097252 Gm6634 EG625901 predicted gene 6634 ncRNA unique_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894 chr2 27733910 27734522 + 0.427313034957894 NA intron (NM_001290482, intron 1 of 9) RLTR17B_Mm|LTR|ERVK 23633 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894-6 chr8 126810871 126811143 + 0.427313034957894 NA Intergenic Intergenic -38013 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_40_28_0.22003355204611_4.96799777115063_0.427313034957894 chr11 69073150 69073410 + 0.427313034957894 NA promoter-TSS (NR_028566) promoter-TSS (NR_028566) -146 NR_028566 100216530 Mm.453052 NR_028566 ENSMUSG00000064899 Snord118 MBI-34 small nucleolar RNA, C/D box 118 snoRNA common_peak2_33_34_-0.319452159608515_4.96955693714071_0.427313034957882-3 chr13 112927673 112928273 + 0.427313034957882 NA promoter-TSS (NM_028151) promoter-TSS (NM_028151) 180 NM_172594 218629 Mm.35094 NM_172594 ENSMUSG00000042426 Dhx29 3732415M03|AU043276|Ddxx|E130202M19Rik DEAH (Asp-Glu-Ala-His) box polypeptide 29 protein-coding common_peak1_33_34_-0.319452159608515_4.96955693714071_0.427313034957882-2 chr7 139280898 139281402 + 0.427313034957882 NA Intergenic Intergenic 32668 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_33_34_-0.319452159608515_4.96955693714071_0.427313034957882 chr10 93272688 93273249 + 0.427313034957882 NA intron (NM_001322265, intron 2 of 4) intron (NM_001322265, intron 2 of 4) 38191 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_33_34_-0.319452159608515_4.96955693714071_0.427313034957882 chr15 98672918 98673473 + 0.427313034957882 NA intron (NM_172612, intron 3 of 4) intron (NM_172612, intron 3 of 4) 4266 NM_172612 223881 Mm.274010 NM_172612 ENSMUSG00000054855 Rnd1 A830014L09Rik|Arhs Rho family GTPase 1 protein-coding common_peak2_33_34_-0.319452159608515_4.96955693714071_0.427313034957882-4 chr17 42316079 42316491 + 0.427313034957882 NA promoter-TSS (NM_001355270) promoter-TSS (NM_001355270) -315 NM_001355270 627626 Mm.390999 NM_028474 ENSMUSG00000042256 Ptchd4 3110082D06Rik|Gm321 patched domain containing 4 protein-coding unique_peak2_33_34_-0.319452159608515_4.96955693714071_0.427313034957882 chr15 87624330 87624979 + 0.427313034957882 NA promoter-TSS (NM_134096) promoter-TSS (NM_134096) -576 NM_134096 106014 Mm.244319 NM_134096 ENSMUSG00000054863 Fam19a5 TAFA5|Tafa-5|Tara-5 family with sequence similarity 19, member A5 protein-coding common_peak2_33_34_-0.319452159608515_4.96955693714071_0.427313034957882-2 chr11 69260925 69261591 + 0.427313034957882 NA Intergenic Intergenic -24236 NM_008192 14919 Mm.291816 NM_008192 ENSMUSG00000020890 Gucy2e GC-E|GC1|ROS-GC1 guanylate cyclase 2e protein-coding common_peak2_33_34_-0.319452159608515_4.96955693714071_0.427313034957882-5 chrX 166510005 166510477 + 0.427313034957882 NA intron (NM_001007577, intron 1 of 4) CpG 237 NM_001007577 245695 Mm.336318 NM_001007577 ENSMUSG00000051224 Tceanc A630018P17Rik|Gm390 transcription elongation factor A (SII) N-terminal and central domain containing protein-coding common_peak1_454_390_-0.0853356132439647_8.56835699068537_0.427214652984004 chr6 42350031 42353876 + 0.427214652984004 NA exon (NM_011777, exon 5 of 10) exon (NM_011777, exon 5 of 10) 2125 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak1_185_139_0.114947145262025_7.18675658957598_0.427181541908062-2 chr8 95330979 95332767 + 0.427181541908062 NA promoter-TSS (NM_024467) promoter-TSS (NM_024467) 77 NM_024467 79233 Mm.350514 NM_024467 ENSMUSG00000046556 Zfp319 AI225750|AI413472|Znf319|mKIAA1388 zinc finger protein 319 protein-coding common_peak1_185_139_0.114947145262025_7.18675658957598_0.427181541908062 chr16 17797369 17798478 + 0.427181541908062 NA intron (NM_153790, intron 1 of 10) CpG 641 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding common_peak1_143_130_-0.155821712011234_6.95551214553183_0.427164737441228-2 chr5 145231212 145232577 + 0.427164737441228 NA intron (NM_028298, intron 1 of 3) CpG 135 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding common_peak1_143_130_-0.155821712011234_6.95551214553183_0.427164737441228 chr11 105181594 105182759 + 0.427164737441228 NA promoter-TSS (NR_027956) promoter-TSS (NR_027956) 649 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding common_peak1_144_130_-0.145908060979548_6.96046897104768_0.427164737441228 chr4 136601382 136602712 + 0.427164737441228 NA intron (NM_001356567, intron 1 of 19) CpG 676 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak2_120_110_-0.166105105373782_6.71136331366321_0.426804924788005 chr9 111271863 111273264 + 0.426804924788005 NA promoter-TSS (NM_026810) promoter-TSS (NM_026810) 718 NM_175266 77781 Mm.209005 NM_175266 ENSMUSG00000046785 Epm2aip1 A930003G21Rik|mKIAA0766 EPM2A (laforin) interacting protein 1 protein-coding common_peak1_134_99_0.14129258030607_6.71450247992776_0.42680492478798 chr15 6708103 6709172 + 0.42680492478798 NA exon (NM_030168, exon 2 of 38) exon (NM_030168, exon 2 of 38) 256 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak2_134_99_0.14129258030607_6.71450247992776_0.42680492478798 chr15 79327006 79328127 + 0.42680492478798 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 805 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-3 chr3 102477431 102477876 + 0.426350872773373 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 7734 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-2 chr2 93849308 93850002 + 0.426350872773373 NA 5' UTR (NM_183220, exon 1 of 15) 5' UTR (NM_183220, exon 1 of 15) 144 NM_183220 329470 Mm.486910 NM_183220 ENSMUSG00000040272 Accs 2610203E10Rik|Phacs 1-aminocyclopropane-1-carboxylate synthase (non-functional) protein-coding common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-3 chr17 12791777 12792506 + 0.426350872773373 NA intron (NR_027784, intron 2 of 2) B1F1|SINE|Alu -22435 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373 chr10 25788116 25788630 + 0.426350872773373 NA intron (NR_045349, intron 3 of 4) intron (NR_045349, intron 3 of 4) 49064 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-6 chr7 131362039 131362679 + 0.426350872773373 NA intron (NR_152380, intron 1 of 5) CpG 367 NM_026655 68277 Mm.121122 NM_026655 ENSMUSG00000040177 2310057M21Rik 3110040E10Rik|AI429544 RIKEN cDNA 2310057M21 gene protein-coding common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-7 chrX 56678468 56679155 + 0.426350872773373 NA Intergenic Intergenic -52950 NM_010211 14199 Mm.3126 NM_010211 ENSMUSG00000023092 Fhl1 FHL-1|KyoT|RAM14-1|SLIM|SLIM-1 four and a half LIM domains 1 protein-coding common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-4 chr2 117743238 117743935 + 0.426350872773373 NA Intergenic Intergenic 69216 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-7 chr7 134288261 134289044 + 0.426350872773373 NA intron (NM_001081331, intron 5 of 7) intron (NM_001081331, intron 5 of 7) -63555 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_46_46_-0.280927548375583_5.41412507748985_0.426350872773373 chr10 80319709 80320379 + 0.426350872773373 NA intron (NM_025521, intron 1 of 1) B1_Mus1|SINE|Alu 504 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-4 chr5 103367800 103368203 + 0.426350872773373 NA Intergenic Intergenic 21403 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak1_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-3 chr5 103367737 103368211 + 0.426350872773373 NA Intergenic Intergenic 21376 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-5 chr7 89517125 89517495 + 0.426350872773373 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 276 NM_029614 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-2 chr10 75170436 75171116 + 0.426350872773373 NA intron (NM_001081412, intron 16 of 22) intron (NM_001081412, intron 16 of 22) -41297 NM_153406 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-5 chr5 103374378 103375355 + 0.426350872773373 NA Intergenic Intergenic 28268 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-2 chr3 52102448 52103010 + 0.426350872773373 NA intron (NM_001004176, intron 1 of 4) CpG 2277 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373-6 chr9 54699571 54700084 + 0.426350872773373 NA exon (NM_001357875, exon 2 of 8) exon (NM_001357875, exon 2 of 8) 268 NM_021422 58233 Mm.489676 NM_021422 ENSMUSG00000032285 Dnaja4 1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4 DnaJ heat shock protein family (Hsp40) member A4 protein-coding common_peak2_55_39_0.202716019331318_5.42328610455302_0.426350872773373 chr19 17355869 17356551 + 0.426350872773373 NA intron (NM_010265, intron 1 of 2) intron (NM_010265, intron 1 of 2) 457 NM_173442 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_46_46_-0.280927548375583_5.41412507748985_0.426350872773373 chr10 56378806 56379231 + 0.426350872773373 NA intron (NM_010288, intron 1 of 1) intron (NM_010288, intron 1 of 1) 1718 NM_010288 14609 Mm.378921 NM_010288 ENSMUSG00000050953 Gja1 AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43 gap junction protein, alpha 1 protein-coding common_peak1_55_39_0.202716019331318_5.42328610455302_0.426350872773373-8 chr8 121952057 121952821 + 0.426350872773373 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 1947 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_217_163_0.114087900937117_7.41459595508664_0.426244390935686 chr7 111081460 111082965 + 0.426244390935686 NA intron (NM_013507, intron 1 of 21) CpG 818 NM_001040131 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak1_160_119_0.130566776188621_6.97217398370283_0.426154880266178-2 chr3 69722059 69723499 + 0.426154880266178 NA intron (NM_133787, intron 2 of 15) intron (NM_133787, intron 2 of 15) 724 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding common_peak1_160_119_0.130566776188621_6.97217398370283_0.426154880266178 chr15 27992324 27994274 + 0.426154880266178 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 32549 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_145_131_-0.147033663365771_6.97087728767557_0.426154880266178 chr12 8771557 8773645 + 0.426154880266178 NA intron (NM_011519, intron 1 of 4) CpG 1205 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak1_248_188_0.0998618193240555_7.6121733338831_0.426017516450685 chr11 72504020 72507079 + 0.426017516450685 NA intron (NM_029932, intron 8 of 11) intron (NM_029932, intron 8 of 11) -15629 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_112_82_0.155283270313327_6.45268106650359_0.425896051280204 chr13 45954796 45956131 + 0.425896051280204 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 9528 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_111_82_0.142549703298512_6.44631428299618_0.425896051280204-2 chr8 94857541 94858459 + 0.425896051280204 NA intron (NM_009090, intron 2 of 8) CpG-14378 550 NM_009090 20021 Mm.292492 NM_009090 ENSMUSG00000031783 Polr2c 33kDa|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C protein-coding common_peak1_111_82_0.142549703298512_6.44631428299618_0.425896051280204 chr12 100779205 100780246 + 0.425896051280204 NA intron (NM_145448, intron 1 of 12) intron (NM_145448, intron 1 of 12) 668 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding common_peak2_111_82_0.142549703298512_6.44631428299618_0.425896051280204 chr3 135670315 135671572 + 0.425896051280204 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 20604 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_112_82_0.155283270313327_6.45268106650359_0.425896051280204 chr4 129741654 129742222 + 0.425896051280204 NA non-coding (NR_045036, exon 1 of 12) non-coding (NR_045036, exon 1 of 12) 365 NM_011317 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak2_99_92_-0.183914928528967_6.44720134684355_0.425896051280179 chr19 9081777 9083031 + 0.425896051280179 NA Intergenic Intergenic 5552 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_90_66_0.154053053998227_6.14311571745688_0.425859000017569 chr12 33957688 33959010 + 0.425859000017569 NA exon (NM_011658, exon 1 of 2) exon (NM_011658, exon 1 of 2) 678 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding common_peak2_79_75_-0.212340529618399_6.14175724863439_0.425859000017569-3 chr10 29361575 29362414 + 0.425859000017569 NA 5' UTR (NM_001110196, exon 1 of 3) 5' UTR (NM_001110196, exon 1 of 3) 448 NM_026518 68031 Mm.28930 NM_026518 ENSMUSG00000038876 Rnf146 2610509H23Rik|Iduna ring finger protein 146 protein-coding common_peak1_80_75_-0.194545060315972_6.1506549832856_0.425859000017569 chr4 54948654 54949902 + 0.425859000017569 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 1333 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_79_75_-0.212340529618399_6.14175724863439_0.425859000017569-5 chr9 57439303 57440031 + 0.425859000017569 NA promoter-TSS (NM_001357913) promoter-TSS (NM_001357913) 69 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_79_75_-0.212340529618399_6.14175724863439_0.425859000017569-4 chr7 132736360 132737458 + 0.425859000017569 NA intron (NM_001347630, intron 3 of 3) intron (NM_001347630, intron 3 of 3) 40007 NM_001347630 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_90_66_0.154053053998227_6.14311571745688_0.425859000017569 chr10 120627482 120628224 + 0.425859000017569 NA Intergenic Intergenic -137879 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_79_75_-0.212340529618399_6.14175724863439_0.425859000017569 chr1 87213673 87214375 + 0.425859000017569 NA promoter-TSS (NM_001039169) promoter-TSS (NM_001039169) 85 NM_001039169 26987 Mm.227183 NM_023314 ENSMUSG00000026254 Eif4e2 2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3 eukaryotic translation initiation factor 4E member 2 protein-coding common_peak2_79_75_-0.212340529618399_6.14175724863439_0.425859000017569-2 chr1 183296452 183297240 + 0.425859000017569 NA promoter-TSS (NM_181732) promoter-TSS (NM_181732) -214 NM_181732 108909 Mm.290502 NM_145626 ENSMUSG00000042901 Aida 2610208M17Rik|BC004835 axin interactor, dorsalization associated protein-coding common_peak1_79_75_-0.212340529618399_6.14175724863439_0.425859000017569 chr10 62313706 62314836 + 0.425859000017569 NA intron (NM_010438, intron 5 of 21) intron (NM_010438, intron 5 of 21) 26150 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_90_66_0.154053053998227_6.14311571745688_0.425859000017569-2 chr12 84189018 84190019 + 0.425859000017569 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 4497 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_90_66_0.154053053998227_6.14311571745688_0.425859000017569-2 chr5 136961735 136962831 + 0.425859000017569 NA intron (NM_025562, intron 1 of 4) intron (NM_025562, intron 1 of 4) 206 NM_025562 66437 Mm.25849 NM_025562 ENSMUSG00000019054 Fis1 2010003O14Rik|Ttc11 fission, mitochondrial 1 protein-coding common_peak1_121_111_-0.167253832327972_6.72372800589362_0.425611658269827 chr8 126838788 126839574 + 0.425611658269827 NA Intergenic Intergenic -9839 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_135_100_0.137509415438169_6.72696619047088_0.425611658269827 chr6 113690667 113691873 + 0.425611658269827 NA intron (NM_001113553, intron 11 of 11) intron (NM_001113553, intron 11 of 11) -5780 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_135_100_0.137509415438169_6.72696619047088_0.425611658269827 chr14 20148434 20149942 + 0.425611658269827 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 32594 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_135_100_0.137509415438169_6.72696619047088_0.425611658269827-2 chr2 155818159 155819074 + 0.425611658269827 NA TTS (NM_010808) TTS (NM_010808) 587 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-17 chr7 144027808 144028116 + 0.425539671739611 NA Intergenic Intergenic 18708 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-17 chr8 84067611 84067812 + 0.425539671739611 NA intron (NM_009055, intron 1 of 20) intron (NM_009055, intron 1 of 20) 875 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-4 chr12 21373228 21373421 + 0.425539671739611 NA intron (NM_001291871, intron 1 of 18) CpG 308 NR_102380 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-5 chr11 51936414 51936651 + 0.425539671739611 NA Intergenic Intergenic -31099 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-5 chr7 90093624 90093866 + 0.425539671739611 NA Intergenic ID_B1|SINE|B4 35729 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-3 chr12 13217954 13218336 + 0.425539671739611 NA Intergenic Intergenic 31029 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-19 chr7 3142655 3142901 + 0.425539671739611 NA intron (NR_001583, intron 3 of 3) intron (NR_001583, intron 3 of 3) 14632 NR_001583 73949 Mm.55687 NR_001583 ENSMUSG00000107956 Speer9-ps1 4930415A14Rik|SPEER-9|Speer9-ps spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1 pseudo common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-14 chr6 99439912 99440117 + 0.425539671739611 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -4669 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-8 chr2 127270846 127271147 + 0.425539671739611 NA intron (NM_139308, intron 1 of 7) intron (NM_139308, intron 1 of 7) 767 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-5 chr15 10791290 10791481 + 0.425539671739611 NA Intergenic Intergenic -37666 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-6 chr15 86213080 86213377 + 0.425539671739611 NA Intergenic Intergenic -1231 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-10 chr2 72235273 72235722 + 0.425539671739611 NA intron (NM_001355478, intron 21 of 26) intron (NM_001355478, intron 21 of 26) -50140 NM_023057 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-3 chr11 65367177 65367428 + 0.425539671739611 NA Intergenic Intergenic -79469 NR_040280 327946 Mm.383301 NR_040280 ENSMUSG00000085162 Gm12295 A730013G04 predicted gene 12295 ncRNA common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-16 chr8 68117267 68117488 + 0.425539671739611 NA Intergenic Intergenic -142803 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-14 chr3 130055380 130055709 + 0.425539671739611 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 5363 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-8 chr6 54867270 54867520 + 0.425539671739611 NA intron (NM_199143, intron 2 of 4) intron (NM_199143, intron 2 of 4) 50479 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-2 chr1 136128089 136128402 + 0.425539671739611 NA intron (NR_046169, intron 2 of 2) intron (NR_046169, intron 2 of 2) 2938 NR_046170 329253 Mm.487858 NR_046167 ENSMUSG00000086264 Gm15850 6530439I21 predicted gene 15850 ncRNA common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-3 chr11 101424381 101424615 + 0.425539671739611 NA promoter-TSS (NM_172566) promoter-TSS (NM_172566) -587 NM_172566 217201 Mm.305941 NM_172566 ENSMUSG00000035007 Rundc1 AW125546|D930024B17 RUN domain containing 1 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-8 chr16 10542618 10542819 + 0.425539671739611 NA 5' UTR (NM_021428, exon 1 of 2) 5' UTR (NM_021428, exon 1 of 2) 336 NM_021428 58239 Mm.353006 NM_021428 ENSMUSG00000038055 Dexi 1810029J14Rik|AI836170|AW413143|D16Bwg0586e|Myle dexamethasone-induced transcript protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-3 chr11 121259540 121259755 + 0.425539671739611 NA promoter-TSS (NM_001080932) promoter-TSS (NM_001080932) -340 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-2 chr1 164632176 164632431 + 0.425539671739611 NA Intergenic Intergenic 128996 NR_151593 102635083 Mm.98705 NR_151593 ENSMUSG00000097281 Gm26685 - predicted gene, 26685 ncRNA common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611 chr1 58727825 58728160 + 0.425539671739611 NA intron (NM_001355056, intron 2 of 8) intron (NM_001355056, intron 2 of 8) -2560 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-13 chr6 34641589 34641975 + 0.425539671739611 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 43278 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-16 chr7 68026786 68027000 + 0.425539671739611 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 74636 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-17 chr5 148950527 148950801 + 0.425539671739611 NA non-coding (NR_040686, exon 2 of 3) non-coding (NR_040686, exon 2 of 3) 414 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-2 chr11 62076237 62076515 + 0.425539671739611 NA promoter-TSS (NM_001029936) promoter-TSS (NM_001029936) -648 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-7 chr15 98531632 98531873 + 0.425539671739611 NA exon (NM_001289437, exon 3 of 10) exon (NM_001289437, exon 3 of 10) 2517 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding unique_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611 chr15 99853093 99853328 + 0.425539671739611 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 22246 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-5 chr12 70554311 70554637 + 0.425539671739611 NA intron (NR_037248, intron 2 of 4) intron (NR_037248, intron 2 of 4) 101320 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611 chr1 135658242 135658599 + 0.425539671739611 NA Intergenic Intergenic 60644 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-12 chr19 44794238 44794449 + 0.425539671739611 NA intron (NM_011037, intron 5 of 9) intron (NM_011037, intron 5 of 9) -14063 NR_105831 102466645 NR_105831 ENSMUSG00000098952 Mir6405 Gm27349|mmu-mir-6405 microRNA 6405 ncRNA unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-16 chr8 32204054 32204358 + 0.425539671739611 NA Intergenic Intergenic 52311 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-12 chr19 34199651 34199931 + 0.425539671739611 NA intron (NM_001360718, intron 1 of 10) intron (NM_001360718, intron 1 of 10) 6857 NM_001360718 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-6 chr3 132869825 132870050 + 0.425539671739611 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 8659 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-11 chr9 44417790 44418004 + 0.425539671739611 NA exon (NM_201372, exon 1 of 11) exon (NM_201372, exon 1 of 11) 172 NR_151776 382073 Mm.259573 NM_201372 ENSMUSG00000043923 Ccdc84 D630044F24Rik|Gm1114 coiled-coil domain containing 84 protein-coding unique_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611 chr13 45802697 45803123 + 0.425539671739611 NA intron (NM_001199304, intron 3 of 6) intron (NM_001199304, intron 3 of 6) 162081 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-24 chr8 61342636 61342835 + 0.425539671739611 NA intron (NM_021506, intron 4 of 11) intron (NM_021506, intron 4 of 11) -53863 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-13 chr8 12805999 12806281 + 0.425539671739611 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 25779 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-5 chr15 103495781 103496094 + 0.425539671739611 NA intron (NM_153505, intron 30 of 30) intron (NM_153505, intron 30 of 30) -7097 NM_008800 18574 Mm.390792 NM_008800 ENSMUSG00000022489 Pde1b Pde1b1 phosphodiesterase 1B, Ca2+-calmodulin dependent protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-9 chr3 57847784 57848006 + 0.425539671739611 NA promoter-TSS (NM_019410) promoter-TSS (NM_019410) -138 NM_019410 18645 Mm.271744 NM_019410 ENSMUSG00000027805 Pfn2 Pfn profilin 2 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-16 chr4 57842665 57842987 + 0.425539671739611 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -2422 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-10 chr19 29499804 29500087 + 0.425539671739611 NA Intergenic Intergenic 22042 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-10 chr4 89293626 89293854 + 0.425539671739611 NA intron (NM_009877, intron 1 of 2) intron (NM_009877, intron 1 of 2) 879 NM_009877 12578 Mm.4733 NM_009877 ENSMUSG00000044303 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19|p19ARF cyclin dependent kinase inhibitor 2A protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-19 chr9 72701078 72701390 + 0.425539671739611 NA intron (NM_001357998, intron 1 of 23) intron (NM_001357998, intron 1 of 23) 7936 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding unique_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-2 chr3 123690582 123690812 + 0.425539671739611 NA intron (NR_121616, intron 1 of 13) intron (NR_121616, intron 1 of 13) 155 NR_121616 83398 Mm.443908 NM_031186 ENSMUSG00000027977 Ndst3 4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-26 chr8 36117348 36117657 + 0.425539671739611 NA intron (NM_172911, intron 3 of 5) intron (NM_172911, intron 3 of 5) 22674 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-8 chr4 11674016 11674377 + 0.425539671739611 NA Intergenic Intergenic -30251 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-7 chr13 73685983 73686316 + 0.425539671739611 NA exon (NM_028878, exon 7 of 12) exon (NM_028878, exon 7 of 12) 6487 NM_001359603 74338 Mm.271635 NM_028878 ENSMUSG00000021565 Slc6a19 4632401C08Rik|B<0>AT1 solute carrier family 6 (neurotransmitter transporter), member 19 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-5 chr11 116106961 116107302 + 0.425539671739611 NA intron (NM_001205081, intron 4 of 5) intron (NM_001205081, intron 4 of 5) 3104 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-12 chr3 102670587 102670816 + 0.425539671739611 NA Intergenic Intergenic -64069 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611 chr1 64004559 64004854 + 0.425539671739611 NA Intergenic Intergenic 37795 NR_105864 102466760 NR_105864 ENSMUSG00000098487 Mir6899 Gm27384|mmu-mir-6899 microRNA 6899 ncRNA unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-15 chr7 34229768 34230131 + 0.425539671739611 NA intron (NM_008155, intron 1 of 17) intron (NM_008155, intron 1 of 17) 387 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-6 chr17 45790682 45791020 + 0.425539671739611 NA Intergenic Intergenic 56345 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-2 chr7 100927998 100928315 + 0.425539671739611 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 4005 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-10 chr6 87839121 87839328 + 0.425539671739611 NA promoter-TSS (NM_133934) promoter-TSS (NM_133934) -465 NM_133934 57905 Mm.241546 NM_133934 ENSMUSG00000030056 Isy1 5830446M03Rik|AI181014|AU020769 ISY1 splicing factor homolog protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-14 chr7 109618624 109619015 + 0.425539671739611 NA Intergenic Intergenic -1672 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-27 chr8 90840368 90840593 + 0.425539671739611 NA intron (NM_177224, intron 1 of 39) intron (NM_177224, intron 1 of 39) 11645 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-16 chr7 112238300 112238595 + 0.425539671739611 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 12611 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-11 chr18 64478146 64478524 + 0.425539671739611 NA intron (NM_007998, intron 3 of 10) intron (NM_007998, intron 3 of 10) 10763 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611 chr1 71892364 71893029 + 0.425539671739611 NA Intergenic URR1B|DNA|hAT-Charlie 4584 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-22 chr7 90303015 90303215 + 0.425539671739611 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 760 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-15 chr4 82401351 82401629 + 0.425539671739611 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 104289 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-18 chrX 167208019 167208278 + 0.425539671739611 NA intron (NM_021278, intron 1 of 2) intron (NM_021278, intron 1 of 2) 1070 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4|Tbeta4 thymosin, beta 4, X chromosome protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-4 chr10 18996689 18997015 + 0.425539671739611 NA Intergenic Intergenic 15111 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611 chr1 91096153 91096344 + 0.425539671739611 NA intron (NM_008515, intron 10 of 22) intron (NM_008515, intron 10 of 22) 42804 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-25 chr8 25015330 25015637 + 0.425539671739611 NA intron (NM_001270996, intron 1 of 21) A-rich|Low_complexity|Low_complexity 1439 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-8 chr17 65702066 65702342 + 0.425539671739611 NA intron (NM_133685, intron 3 of 6) intron (NM_133685, intron 3 of 6) -60000 NM_001146002 213272 Mm.255732 NM_153519 ENSMUSG00000050612 Txndc2 AU021712|Sptrx-1|Sptrx1|Trx4 thioredoxin domain containing 2 (spermatozoa) protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-20 chr5 113542035 113542541 + 0.425539671739611 NA Intergenic Intergenic -8132 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-5 chr15 86202445 86202685 + 0.425539671739611 NA Intergenic Intergenic -11894 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-6 chr18 56400563 56400926 + 0.425539671739611 NA intron (NM_001360917, intron 1 of 13) intron (NM_001360917, intron 1 of 13) 404 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-4 chr15 59550780 59551030 + 0.425539671739611 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -97749 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-13 chr5 143057493 143057803 + 0.425539671739611 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 55372 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-2 chr10 70494695 70494982 + 0.425539671739611 NA intron (NM_001359551, intron 5 of 14) intron (NM_001359551, intron 5 of 14) 53928 NM_001143776 71721 Mm.477813 NM_024244 ENSMUSG00000043259 Fam13c 1200015N20Rik|C030038O19Rik|mKIAA1796 family with sequence similarity 13, member C protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-8 chr5 139733011 139733235 + 0.425539671739611 NA intron (NM_174850, intron 1 of 16) intron (NM_174850, intron 1 of 16) 3210 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-11 chr4 141883142 141883588 + 0.425539671739611 NA Intergenic Intergenic -8445 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-9 chr17 45772216 45772469 + 0.425539671739611 NA intron (NR_152153, intron 2 of 4) (TG)n|Simple_repeat|Simple_repeat 37836 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-14 chr3 121481996 121482301 + 0.425539671739611 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 50196 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-2 chr1 191062526 191062775 + 0.425539671739611 NA promoter-TSS (NM_198654) promoter-TSS (NM_198654) 260 NM_001357166 68972 Mm.237188 NM_026895 ENSMUSG00000026632 Tatdn3 1500010M24Rik TatD DNase domain containing 3 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-7 chr15 98992923 98993154 + 0.425539671739611 NA Intergenic Intergenic 7073 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-11 chr7 44468178 44468475 + 0.425539671739611 NA TTS (NM_026690) TTS (NM_026690) 346 NM_001205070 66124 Mm.358691 NM_025368 ENSMUSG00000038695 Josd2 1110007C05Rik Josephin domain containing 2 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-15 chr3 144694146 144694415 + 0.425539671739611 NA intron (NM_001282037, intron 9 of 10) intron (NM_001282037, intron 9 of 10) 26055 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-8 chr2 155929745 155929995 + 0.425539671739611 NA intron (NM_001355441, intron 1 of 9) intron (NM_001355441, intron 1 of 9) 440 NM_001355443 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-11 chr2 167656761 167656964 + 0.425539671739611 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 4682 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-7 chr3 95689098 95689407 + 0.425539671739611 NA Intergenic Intergenic -1335 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-21 chr6 82880258 82880594 + 0.425539671739611 NA non-coding (NR_040520, exon 3 of 4) non-coding (NR_040520, exon 3 of 4) 1427 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-3 chr11 35933969 35934409 + 0.425539671739611 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 45900 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-9 chr16 13161229 13161594 + 0.425539671739611 NA Intergenic Intergenic 51675 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-28 chr8 126566366 126566646 + 0.425539671739611 NA Intergenic Intergenic 26930 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-3 chr1 179574155 179574446 + 0.425539671739611 NA intron (NM_146105, intron 1 of 10) intron (NM_146105, intron 1 of 10) 27771 NM_146105 226744 Mm.87662 NM_146105 ENSMUSG00000038949 Cnst 9630058J23Rik consortin, connexin sorting protein protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-2 chr11 79712037 79712248 + 0.425539671739611 NA TTS (NR_029579) TTS (NR_029579) 173 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-7 chr2 117654805 117655026 + 0.425539671739611 NA Intergenic Intergenic 157887 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-12 chr4 150239449 150239914 + 0.425539671739611 NA intron (NM_023119, intron 2 of 11) PB1D10|SINE|Alu 2357 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-30 chrX 48423257 48423614 + 0.425539671739611 NA intron (NM_019680, intron 2 of 8) intron (NM_019680, intron 2 of 8) 39697 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-19 chr4 149255707 149256094 + 0.425539671739611 NA intron (NM_008441, intron 13 of 20) intron (NM_008441, intron 13 of 20) 51798 NM_207682 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-12 chr5 140772606 140772829 + 0.425539671739611 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 48590 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-7 chr15 58914360 58914802 + 0.425539671739611 NA intron (NM_175151, intron 8 of 11) intron (NM_175151, intron 8 of 11) 19149 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-8 chr14 76702592 76703137 + 0.425539671739611 NA Intergenic L2b|LINE|L2 25296 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-11 chr18 56358494 56358775 + 0.425539671739611 NA Intergenic B1_Mur1|SINE|Alu -41706 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-13 chr2 20937698 20937961 + 0.425539671739611 NA intron (NM_001128084, intron 1 of 24) intron (NM_001128084, intron 1 of 24) 29892 NM_001081364 71435 Mm.28507 NM_001081364 ENSMUSG00000036591 Arhgap21 5530401C11Rik|AA416458|ARHGAP10 Rho GTPase activating protein 21 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-8 chr17 14990599 14990945 + 0.425539671739611 NA exon (NM_001123370, exon 12 of 12) exon (NM_001123370, exon 12 of 12) 11908 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-29 chrX 47912443 47912679 + 0.425539671739611 NA 5' UTR (NM_177215, exon 1 of 24) 5' UTR (NM_177215, exon 1 of 24) 105 NM_177215 320634 Mm.210343 NM_177215 ENSMUSG00000001173 Ocrl 9530014D17Rik|BB143339|OCRL1 OCRL, inositol polyphosphate-5-phosphatase protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-24 chr7 99380983 99381182 + 0.425539671739611 NA promoter-TSS (NM_001362166) promoter-TSS (NM_001362166) -436 NM_001362168 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611 chr11 53309278 53309482 + 0.425539671739611 NA Intergenic Intergenic -8901 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-17 chrX 135008874 135009119 + 0.425539671739611 NA 5' UTR (NM_175446, exon 1 of 7) 5' UTR (NM_175446, exon 1 of 7) 213 NM_175446 215693 Mm.336238 NM_175446 ENSMUSG00000052676 Zmat1 A230096A06|AW990744|B930008K04Rik zinc finger, matrin type 1 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-25 chrX 36598434 36598774 + 0.425539671739611 NA exon (NM_016783, exon 1 of 3) exon (NM_016783, exon 1 of 3) 411 NM_016783 53328 Mm.9052 NM_016783 ENSMUSG00000006373 Pgrmc1 AA415812|HPR6.6|PPMR|Vema|mPR progesterone receptor membrane component 1 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-7 chr3 153669241 153669443 + 0.425539671739611 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 55791 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-18 chr4 129007090 129007505 + 0.425539671739611 NA intron (NM_016895, intron 4 of 6) intron (NM_016895, intron 4 of 6) 14073 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-10 chr5 140606754 140607054 + 0.425539671739611 NA promoter-TSS (NM_008494) promoter-TSS (NM_008494) -437 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-7 chr16 93007055 93007254 + 0.425539671739611 NA Intergenic Intergenic -181080 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-11 chr4 150798300 150798683 + 0.425539671739611 NA Intergenic L1MC1|LINE|L1 -55305 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-6 chr17 25568357 25568959 + 0.425539671739611 NA intron (NM_011447, intron 2 of 2) intron (NM_011447, intron 2 of 2) 2028 NM_011447 20681 Mm.258220 NM_011447 ENSMUSG00000024176 Sox8 - SRY (sex determining region Y)-box 8 protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-9 chr7 84087163 84087458 + 0.425539671739611 NA promoter-TSS (NM_030728) promoter-TSS (NM_030728) -805 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-22 chr6 112947504 112947746 + 0.425539671739611 NA promoter-TSS (NM_080448) promoter-TSS (NM_080448) -359 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-6 chr13 41670940 41671146 + 0.425539671739611 NA Intergenic Intergenic 64827 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-18 chr8 73232912 73233158 + 0.425539671739611 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 120505 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-9 chr5 138989034 138989306 + 0.425539671739611 NA intron (NM_008808, intron 2 of 5) intron (NM_008808, intron 2 of 5) 5783 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-20 chr7 30551934 30552156 + 0.425539671739611 NA promoter-TSS (NR_128568) promoter-TSS (NR_128568) 227 NM_183321 333193 Mm.34885 NM_183321 ENSMUSG00000036864 Proser3 - proline and serine rich 3 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-3 chr10 111685255 111685559 + 0.425539671739611 NA Intergenic Intergenic -91134 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-4 chr7 45129183 45129458 + 0.425539671739611 NA promoter-TSS (NM_009438) promoter-TSS (NM_009438) -575 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-18 chr6 84181749 84182000 + 0.425539671739611 NA intron (NM_001077694, intron 41 of 54) intron (NM_001077694, intron 41 of 54) 162488 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-17 chr4 89054367 89054649 + 0.425539671739611 NA intron (NR_033533, intron 1 of 2) Charlie2a|DNA|hAT-Charlie 4201 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-15 chr7 80839127 80839578 + 0.425539671739611 NA Intergenic Intergenic -22756 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-13 chr3 121968312 121968546 + 0.425539671739611 NA intron (NM_001356524, intron 1 of 22) intron (NM_001356524, intron 1 of 22) 623 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611 chr1 40223559 40223913 + 0.425539671739611 NA Intergenic Intergenic -1344 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-2 chr1 91494612 91495048 + 0.425539671739611 NA exon (NM_028718, exon 1 of 15) exon (NM_028718, exon 1 of 15) 162 NM_028718 74019 Mm.318430 NM_028718 ENSMUSG00000034292 Traf3ip1 3930402D05Rik|AU041749|MIP-T3 TRAF3 interacting protein 1 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-5 chr13 108243372 108243712 + 0.425539671739611 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 29138 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-23 chr7 66078757 66079120 + 0.425539671739611 NA promoter-TSS (NM_024439) promoter-TSS (NM_024439) -711 NM_001348246 109815 Mm.482127 NM_024439 ENSMUSG00000075701 Selenos 1500011E07Rik|C78786|H-4|H-47|H4|H47|Sels|Vimp selenoprotein S protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611 chr1 74054582 74054943 + 0.425539671739611 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 69685 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-23 chr7 141339932 141340186 + 0.425539671739611 NA intron (NM_133191, intron 1 of 20) intron (NM_133191, intron 1 of 20) 1057 NM_133191 98845 Mm.27451 NM_133191 ENSMUSG00000025504 Eps8l2 AI042819|AW545405|Eps8r2 EPS8-like 2 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-6 chr16 24136089 24136356 + 0.425539671739611 NA Intergenic Intergenic -53532 NR_155457 108168278 Mm.417246 NR_155457 Gm46545 - predicted gene, 46545 ncRNA common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-13 chr6 146846758 146846974 + 0.425539671739611 NA Intergenic Intergenic -3244 NM_027059 69371 Mm.252733 NM_027059 ENSMUSG00000030292 Smco2 1700023A16Rik single-pass membrane protein with coiled-coil domains 2 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-15 chr7 130142367 130142684 + 0.425539671739611 NA Intergenic Intergenic 124283 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-21 chr7 74524382 74524628 + 0.425539671739611 NA intron (NM_001038643, intron 1 of 10) intron (NM_001038643, intron 1 of 10) 30275 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-3 chr5 77369684 77369922 + 0.425539671739611 NA intron (NM_008048, intron 1 of 4) PB1D10|SINE|Alu 38242 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-16 chr4 107554593 107554987 + 0.425539671739611 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 120071 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-17 chr9 21852274 21852517 + 0.425539671739611 NA intron (NM_177030, intron 1 of 49) CpG 240 NM_177030 319899 Mm.128153 NM_177030 ENSMUSG00000032198 Dock6 2410095B20Rik|4931431C02Rik|C330023D02Rik|mKIAA1395 dedicator of cytokinesis 6 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-5 chr11 117311464 117311712 + 0.425539671739611 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -20127 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-2 chr10 80117431 80117917 + 0.425539671739611 NA intron (NM_001301853, intron 1 of 8) intron (NM_001301853, intron 1 of 8) 1871 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-9 chr18 68155018 68155326 + 0.425539671739611 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -72774 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-12 chr5 92205584 92205872 + 0.425539671739611 NA Intergenic Intergenic 9680 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-15 chr7 25786990 25787306 + 0.425539671739611 NA intron (NM_009465, intron 2 of 19) MIR|SINE|MIR 1585 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-2 chr10 17010745 17010964 + 0.425539671739611 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 84928 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-4 chr13 99151229 99151486 + 0.425539671739611 NA Intergenic Intergenic -33466 NM_001004149 238803 Mm.343207 NM_001004149 ENSMUSG00000050919 Zfp366 DC-SCRIPT|Znf366 zinc finger protein 366 protein-coding common_peak1_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-7 chr2 126948671 126948913 + 0.425539671739611 NA Intergenic B1F|SINE|Alu -15557 NM_023220 66552 Mm.269928 NM_023220 ENSMUSG00000027366 Sppl2a 2010106G01Rik|C130089K23Rik signal peptide peptidase like 2A protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-10 chr18 24603939 24604151 + 0.425539671739611 NA promoter-TSS (NM_139143) promoter-TSS (NM_139143) 84 NM_021448 58523 Mm.25298 NM_021448 ENSMUSG00000024271 Elp2 AU023723|Epl2|StIP1|Statip1 elongator acetyltransferase complex subunit 2 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-4 chr12 69297696 69297907 + 0.425539671739611 NA intron (NM_027117, intron 1 of 12) intron (NM_027117, intron 1 of 12) 1120 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-9 chr18 35829172 35829401 + 0.425539671739611 NA promoter-TSS (NM_133687) promoter-TSS (NM_133687) -502 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-9 chr5 151066166 151066420 + 0.425539671739611 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 113686 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-6 chr13 56607463 56607690 + 0.425539671739611 NA Intergenic Intergenic -2010 NM_009369 21810 Mm.14455 NM_009369 ENSMUSG00000035493 Tgfbi 68kDa|AI181842|AI747162|Beta-ig|big-h3 transforming growth factor, beta induced protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-5 chr18 56358484 56358803 + 0.425539671739611 NA Intergenic B1_Mur1|SINE|Alu -41697 NM_001360917 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2 GRAM domain containing 3 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-13 chr3 101108855 101109063 + 0.425539671739611 NA intron (NM_011197, intron 1 of 8) intron (NM_011197, intron 1 of 8) 1207 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-4 chr10 86778637 86778858 + 0.425539671739611 NA promoter-TSS (NM_175331) promoter-TSS (NM_175331) -258 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-3 chr1 170146333 170146607 + 0.425539671739611 NA intron (NM_001305046, intron 8 of 9) intron (NM_001305046, intron 8 of 9) 28494 NM_133806 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-11 chr2 12419531 12419759 + 0.425539671739611 NA promoter-TSS (NR_149732) promoter-TSS (NR_149732) -185 NR_149731 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Mindy3 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958|Fam188a MINDY lysine 48 deubiquitinase 3 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-10 chr17 75273046 75273368 + 0.425539671739611 NA intron (NM_019919, intron 10 of 33) intron (NM_019919, intron 10 of 33) 94426 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-4 chr13 5871074 5871374 + 0.425539671739611 NA TTS (NM_011803) TTS (NM_011803) 9735 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-12 chr8 11299801 11300106 + 0.425539671739611 NA intron (NM_009931, intron 1 of 51) intron (NM_009931, intron 1 of 51) -12852 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611 chr1 156070695 156070971 + 0.425539671739611 NA Intergenic Intergenic 29972 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak2_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-6 chr11 96288472 96288812 + 0.425539671739611 NA intron (NM_010460, intron 1 of 1) intron (NM_010460, intron 1 of 1) 1996 NM_010460 15415 Mm.390366 NM_010460 ENSMUSG00000038721 Hoxb7 AI325018|Hox-2.3 homeobox B7 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-14 chr7 3028096 3028526 + 0.425539671739611 NA Intergenic Intergenic -99835 NR_001583 73949 Mm.55687 NR_001583 ENSMUSG00000107956 Speer9-ps1 4930415A14Rik|SPEER-9|Speer9-ps spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1 pseudo unique_peak1_14_16_-0.449875316477966_3.86252518301136_0.425539671739611-6 chr8 106401409 106401670 + 0.425539671739611 NA Intergenic Intergenic -13800 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-9 chr2 137005899 137006313 + 0.425539671739611 NA intron (NM_001038641, intron 4 of 7) URR1A|DNA|hAT-Charlie 106755 NM_001038641 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding common_peak2_18_12_0.2757787159773_3.83832907612974_0.425539671739611-14 chr6 145793942 145794266 + 0.425539671739611 NA Intergenic Intergenic -14279 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-4 chr11 35933870 35934126 + 0.425539671739611 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 46091 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding unique_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-4 chr11 94497795 94498018 + 0.425539671739611 NA intron (NM_001361558, intron 1 of 8) intron (NM_001361558, intron 1 of 8) 2068 NM_001361558 71889 Mm.248620 NM_027984 ENSMUSG00000010080 Epn3 2310022G12Rik epsin 3 protein-coding common_peak2_13_16_-0.54870876788517_3.81310845730775_0.425539671739611-10 chr4 137084539 137084965 + 0.425539671739611 NA Intergenic L1M2|LINE|L1 -36057 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding unique_peak1_18_12_0.2757787159773_3.83832907612974_0.425539671739611-3 chr10 91230244 91230839 + 0.425539671739611 NA Intergenic Intergenic -9922 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_200_178_-0.128482136969658_7.41957470877943_0.425511732353046 chr8 126837625 126839575 + 0.425511732353046 NA Intergenic Intergenic -10420 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_62_60_-0.237367039316053_5.81205381790486_0.425219862997755 chr8 25785313 25785941 + 0.425219862997755 NA promoter-TSS (NM_026121) promoter-TSS (NM_026121) 36 NM_026032 67207 Mm.30198 NM_026032 ENSMUSG00000037296 Lsm1 2810025O06Rik|CASM LSM1 homolog, mRNA degradation associated protein-coding common_peak2_62_60_-0.237367039316053_5.81205381790486_0.425219862997755 chr5 134437871 134438264 + 0.425219862997755 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 18195 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_62_60_-0.237367039316053_5.81205381790486_0.425219862997755-2 chr8 94772004 94773015 + 0.425219862997755 NA intron (NM_009142, intron 1 of 2) intron (NM_009142, intron 1 of 2) 329 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak1_72_52_0.176494981002728_5.81616794506456_0.425219862997731-2 chr17 28348410 28349615 + 0.425219862997731 NA intron (NM_011566, intron 1 of 12) intron (NM_011566, intron 1 of 12) 1334 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak1_72_52_0.176494981002728_5.81616794506456_0.425219862997731 chr10 79916569 79917236 + 0.425219862997731 NA promoter-TSS (NM_177994) promoter-TSS (NM_177994) 28 NM_177994 109284 Mm.300416 NM_177994 ENSMUSG00000035781 R3hdm4 AI503502|C030046I01Rik R3H domain containing 4 protein-coding common_peak1_72_52_0.176494981002728_5.81616794506456_0.425219862997731-5 chr8 26687771 26688732 + 0.425219862997731 NA Intergenic Intergenic 136172 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_72_52_0.176494981002728_5.81616794506456_0.425219862997731-3 chr2 74711798 74712819 + 0.425219862997731 NA 5' UTR (NM_010468, exon 1 of 3) 5' UTR (NM_010468, exon 1 of 3) 315 NM_010468 15434 Mm.430708 NM_010468 ENSMUSG00000079277 Hoxd3 Hox-4.1|Hox-5.5 homeobox D3 protein-coding common_peak1_72_52_0.176494981002728_5.81616794506456_0.425219862997731-4 chr6 82755633 82756317 + 0.425219862997731 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 18479 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_72_52_0.176494981002728_5.81616794506456_0.425219862997731 chr17 72836710 72837182 + 0.425219862997731 NA promoter-TSS (NM_001357369) promoter-TSS (NM_001357369) 318 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee like 5 protein-coding common_peak2_72_52_0.176494981002728_5.81616794506456_0.425219862997731-2 chr19 6297332 6297644 + 0.425219862997731 NA intron (NM_010119, intron 3 of 4) intron (NM_010119, intron 3 of 4) -8969 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_161_120_0.127464236279775_6.98259535541448_0.425161070925192 chr6 71271689 71272739 + 0.425161070925192 NA TTS (NR_106192) TTS (NR_106192) 195 NM_145568 57896 Mm.250569 NM_145568 ENSMUSG00000053012 Krcc1 AA792894 lysine-rich coiled-coil 1 protein-coding common_peak1_189_142_0.114839057374149_7.21729086546546_0.424631379443554 chr9 92541256 92543561 + 0.424631379443554 NA non-coding (NR_029474, exon 1 of 1) non-coding (NR_029474, exon 1 of 1) 185 NM_001142916 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak2_113_83_0.150626654420596_6.46763074998906_0.424475579964465 chr16 94312239 94313663 + 0.424475579964465 NA intron (NM_139145, intron 1 of 10) intron (NM_139145, intron 1 of 10) 612 NM_139145 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak1_113_83_0.150626654420596_6.46763074998906_0.424475579964465 chr16 4789249 4790614 + 0.424475579964465 NA promoter-TSS (NM_001358080) promoter-TSS (NM_001358080) 10 NM_025670 66626 Mm.157648 NM_025670 ENSMUSG00000004071 Cdip1 2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP cell death inducing Trp53 target 1 protein-coding common_peak2_101_93_-0.170977371686976_6.46910016583415_0.424475579964441-2 chr18 80536062 80536770 + 0.424475579964441 NA Intergenic Intergenic 8130 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_101_93_-0.170977371686976_6.46910016583415_0.424475579964441-3 chr8 106619441 106620643 + 0.424475579964441 NA intron (NM_009864, intron 2 of 15) intron (NM_009864, intron 2 of 15) 16692 NM_009864 12550 Mm.35605 NM_009864 ENSMUSG00000000303 Cdh1 AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um cadherin 1 protein-coding common_peak2_100_93_-0.185090952420224_6.46204337546753_0.424475579964441 chr10 91122887 91123926 + 0.424475579964441 NA intron (NM_133668, intron 2 of 7) intron (NM_133668, intron 2 of 7) 557 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak2_101_93_-0.170977371686976_6.46910016583415_0.424475579964441 chr15 56843338 56844519 + 0.424475579964441 NA Intergenic Intergenic -149382 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_101_93_-0.170977371686976_6.46910016583415_0.424475579964441 chr1 64614564 64615798 + 0.424475579964441 NA exon (NM_025964, exon 2 of 3) exon (NM_025964, exon 2 of 3) 1987 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding common_peak2_136_101_0.133790232144285_6.73932045804364_0.424440830748062 chr8 54608497 54609373 + 0.424440830748062 NA intron (NM_133711, intron 5 of 5) intron (NM_133711, intron 5 of 5) 8154 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak1_136_101_0.133790232144285_6.73932045804364_0.424440830748062 chr2 128967392 128968408 + 0.424440830748062 NA intron (NM_178404, intron 1 of 11) GC_rich|Low_complexity|Low_complexity 498 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding common_peak1_136_101_0.133790232144285_6.73932045804364_0.424440830748062-2 chr4 139130115 139131165 + 0.424440830748062 NA intron (NM_001163006, intron 1 of 3) CpG 397 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak2_122_112_-0.168383792587295_6.73598706612154_0.424440830748037 chr1 131910539 131911671 + 0.424440830748037 NA intron (NM_001145804, intron 1 of 6) CpG 647 NM_175294 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding common_peak2_302_263_-0.10111559744683_7.99383632063504_0.424344779457901 chr15 77035990 77038497 + 0.424344779457901 NA intron (NM_013593, intron 1 of 3) CT-rich|Low_complexity|Low_complexity -7832 NM_001163621 71939 Mm.34173 NM_028010 ENSMUSG00000033576 Apol6 2310076O14Rik apolipoprotein L 6 protein-coding common_peak2_81_76_-0.195826973094463_6.16887305414767_0.424110812404971-2 chr8 31821799 31822547 + 0.424110812404971 NA intron (NM_178591, intron 7 of 8) intron (NM_178591, intron 7 of 8) 96030 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_92_67_0.163822300529898_6.16937399151529_0.424110812404971 chr3 104638233 104639549 + 0.424110812404971 NA intron (NM_009196, intron 1 of 4) CpG 227 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak2_92_67_0.163822300529898_6.16937399151529_0.424110812404971 chr9 18292354 18293230 + 0.424110812404971 NA intron (NM_025844, intron 1 of 10) intron (NM_025844, intron 1 of 10) 525 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding common_peak2_81_76_-0.195826973094463_6.16887305414767_0.424110812404971 chr15 81872103 81872939 + 0.424110812404971 NA promoter-TSS (NM_080633) promoter-TSS (NM_080633) 58 NM_080633 11429 Mm.154581 NM_080633 ENSMUSG00000022477 Aco2 Aco-2|Aco3|D10Wsu183e aconitase 2, mitochondrial protein-coding common_peak1_220_166_0.10751473595323_7.43746166045067_0.424071846345014 chr12 77237801 77239749 + 0.424071846345014 NA promoter-TSS (NR_045554) promoter-TSS (NR_045554) 36 NR_045554 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak2_174_156_-0.137717816738433_7.22576184052241_0.423804090989636 chr5 142960203 142962612 + 0.423804090989636 NA intron (NM_007984, intron 1 of 4) MT2B|LTR|ERVL 1052 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak1_191_143_0.119785706283206_7.22981785458392_0.423804090989636 chr8 25518758 25520503 + 0.423804090989636 NA intron (NM_001079908, intron 1 of 17) intron (NM_001079908, intron 1 of 17) 871 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_254_192_0.103756361903216_7.64433521821969_0.423510307243405 chr19 5058218 5059949 + 0.423510307243405 NA Intergenic Intergenic 8275 NM_145495 225870 Mm.271922 NM_145495 ENSMUSG00000024883 Rin1 - Ras and Rab interactor 1 protein-coding common_peak1_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-3 chr17 88629436 88629877 + 0.423463616707761 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 3101 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761 chr10 80929328 80929735 + 0.423463616707761 NA promoter-TSS (NM_008655) promoter-TSS (NM_008655) -560 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak1_56_40_0.192447052154518_5.45377553069534_0.423463616707761-3 chr9 96751984 96752745 + 0.423463616707761 NA intron (NR_015511, intron 1 of 3) intron (NR_015511, intron 1 of 3) 467 NR_015511 319859 Mm.259909 NM_177020 E030011O05Rik - RIKEN cDNA E030011O05 gene ncRNA common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-3 chr16 17891256 17891676 + 0.423463616707761 NA 5' UTR (NM_010048, exon 1 of 10) 5' UTR (NM_010048, exon 1 of 10) 262 NM_010048 13356 Mm.254515 NM_010048 ENSMUSG00000003166 Dgcr2 9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163 DiGeorge syndrome critical region gene 2 protein-coding common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-7 chr9 44305082 44305580 + 0.423463616707761 NA intron (NM_172162, intron 1 of 9) CpG 340 NM_172162 102423 Mm.24570 NM_172162 ENSMUSG00000032119 Hinfp AA589481|HiNF-P|Mizf histone H4 transcription factor protein-coding common_peak1_56_40_0.192447052154518_5.45377553069534_0.423463616707761 chr11 79145564 79146387 + 0.423463616707761 NA intron (NM_013571, intron 1 of 17) CpG 498 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak1_48_47_-0.251604357355101_5.4591603220436_0.423463616707761 chr15 84922413 84923152 + 0.423463616707761 NA promoter-TSS (NM_016714) promoter-TSS (NM_016714) -646 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak1_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-6 chr6 29768566 29769426 + 0.423463616707761 NA intron (NM_001171000, intron 1 of 16) CpG 553 NM_001171000 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak1_47_47_-0.28114183384915_5.44439158379658_0.423463616707761 chr11 100737683 100738137 + 0.423463616707761 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 305 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding common_peak1_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-5 chr4 88805245 88805874 + 0.423463616707761 NA promoter-TSS (NM_001243167) promoter-TSS (NM_001243167) 28 NM_001243167 668208 Mm.487241 NM_001243167 ENSMUSG00000070908 Gm13288 - predicted gene 13288 protein-coding common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-5 chr5 122391913 122392472 + 0.423463616707761 NA intron (NM_019824, intron 1 of 6) intron (NM_019824, intron 1 of 6) 314 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak2_56_40_0.192447052154518_5.45377553069534_0.423463616707761 chr11 48869075 48869700 + 0.423463616707761 NA intron (NM_008326, intron 1 of 2) intron (NM_008326, intron 1 of 2) 2033 NM_001355757 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak2_56_40_0.192447052154518_5.45377553069534_0.423463616707761-4 chr6 39724708 39725434 + 0.423463616707761 NA intron (NM_139294, intron 1 of 21) CpG 392 NM_139294 109880 Mm.245513 NM_139294 ENSMUSG00000002413 Braf 9930012E13Rik|AA120551|AA387315|AA473386|B-raf|Braf-2|Braf2|C230098H17|C87398|D6Ertd631e Braf transforming gene protein-coding common_peak2_47_47_-0.28114183384915_5.44439158379658_0.423463616707761 chr17 14339581 14340107 + 0.423463616707761 NA intron (NM_022315, intron 4 of 12) intron (NM_022315, intron 4 of 12) 59098 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA common_peak1_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-2 chr17 45685653 45686087 + 0.423463616707761 NA promoter-TSS (NM_026732) promoter-TSS (NM_026732) 348 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding common_peak2_56_40_0.192447052154518_5.45377553069534_0.423463616707761-3 chr15 5495669 5496520 + 0.423463616707761 NA promoter-TSS (NR_045274) promoter-TSS (NR_045274) -224 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-2 chr4 129742624 129743133 + 0.423463616707761 NA promoter-TSS (NR_045036) promoter-TSS (NR_045036) -575 NR_045036 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-4 chr2 83675546 83676392 + 0.423463616707761 NA Intergenic Intergenic 31391 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak1_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-5 chr6 42509565 42510075 + 0.423463616707761 NA Intergenic Intergenic -22606 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-6 chr7 25237219 25237790 + 0.423463616707761 NA exon (NM_001031667, exon 1 of 11) exon (NM_001031667, exon 1 of 11) 347 NM_001031667 606496 Mm.491101 NM_001031667 ENSMUSG00000057177 Gsk3a 2700086H06Rik glycogen synthase kinase 3 alpha protein-coding common_peak2_56_40_0.192447052154518_5.45377553069534_0.423463616707761-5 chr8 84066867 84067378 + 0.423463616707761 NA intron (NM_009055, intron 1 of 20) CpG 286 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding unique_peak1_56_40_0.192447052154518_5.45377553069534_0.423463616707761 chr15 25268702 25269574 + 0.423463616707761 NA Intergenic Intergenic 144626 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-4 chr8 11261239 11261762 + 0.423463616707761 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -51305 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-2 chr16 13109947 13110423 + 0.423463616707761 NA intron (NM_015769, intron 1 of 10) CpG 449 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding common_peak2_56_40_0.192447052154518_5.45377553069534_0.423463616707761-2 chr13 117024067 117024713 + 0.423463616707761 NA intron (NM_001081009, intron 2 of 26) CpG 1126 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_56_40_0.192447052154518_5.45377553069534_0.423463616707761-2 chr19 36120286 36120818 + 0.423463616707761 NA promoter-TSS (NM_013468) promoter-TSS (NM_013468) -708 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak2_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-3 chr5 45520098 45520775 + 0.423463616707761 NA exon (NM_025895, exon 1 of 4) exon (NM_025895, exon 1 of 4) 207 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding common_peak1_47_47_-0.28114183384915_5.44439158379658_0.423463616707761-4 chr19 5295050 5295474 + 0.423463616707761 NA exon (NM_030109, exon 1 of 21) exon (NM_030109, exon 1 of 21) 193 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding common_peak1_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-3 chr2 102400422 102401002 + 0.423463616707761 NA 5' UTR (NM_020267, exon 1 of 5) 5' UTR (NM_020267, exon 1 of 5) 188 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding unique_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761 chr3 137289039 137289885 + 0.423463616707761 NA Intergenic Intergenic -51616 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak2_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-2 chr11 104468711 104469457 + 0.423463616707761 NA promoter-TSS (NM_001359634) promoter-TSS (NM_001359634) -223 NM_001359634 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_56_40_0.192447052154518_5.45377553069534_0.423463616707761-3 chr4 118134246 118134908 + 0.423463616707761 NA 5' UTR (NM_009176, exon 1 of 12) 5' UTR (NM_009176, exon 1 of 12) 369 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding unique_peak1_56_40_0.192447052154518_5.45377553069534_0.423463616707761-2 chr6 72097806 72098436 + 0.423463616707761 NA intron (NM_011375, intron 1 of 6) intron (NM_011375, intron 1 of 6) 513 NM_011375 20454 Mm.38248 NM_011375 ENSMUSG00000056091 St3gal5 3S-T|Siat9|[a]2 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding common_peak1_48_47_-0.251604357355101_5.4591603220436_0.423463616707761-4 chr2 129210276 129211043 + 0.423463616707761 NA intron (NM_015747, intron 10 of 10) intron (NM_015747, intron 10 of 10) 3563 NM_001355252 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-15 chr8 124317087 124317703 + 0.423354874519384 NA intron (NM_139272, intron 3 of 15) intron (NM_139272, intron 3 of 15) 86001 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-4 chr2 30453313 30453940 + 0.423354874519384 NA Intergenic Intergenic 20573 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-11 chr8 122143591 122143935 + 0.423354874519384 NA Intergenic Intergenic -138378 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-7 chr8 24574202 24574592 + 0.423354874519384 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 1936 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-7 chr2 180257459 180257875 + 0.423354874519384 NA TTS (NR_037274) TTS (NR_037274) 131 NR_037274 100526556 NR_037274 ENSMUSG00000092827 Mir3091 mir-3091|mmu-mir-3091 microRNA 3091 ncRNA common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-4 chr19 10604093 10604447 + 0.423354874519384 NA promoter-TSS (NM_145496) promoter-TSS (NM_145496) -12 NM_145496 225913 Mm.374868 NM_145496 ENSMUSG00000034371 Tkfc BC021917|Dak triokinase, FMN cyclase protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-4 chr13 17604351 17604893 + 0.423354874519384 NA intron (NM_138654, intron 6 of 13) intron (NM_138654, intron 6 of 13) 90143 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-10 chr4 133130027 133130405 + 0.423354874519384 NA promoter-TSS (NM_153423) promoter-TSS (NM_153423) -417 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-8 chrX 97376161 97376935 + 0.423354874519384 NA intron (NM_001161432, intron 1 of 7) intron (NM_001161432, intron 1 of 7) 661 NM_001161432 245527 Mm.189270 NM_175540 ENSMUSG00000034457 Eda2r 9430060M22Rik|TNFRSF27|Xedar ectodysplasin A2 receptor protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-4 chr15 79773830 79774262 + 0.423354874519384 NA intron (NM_017470, intron 1 of 3) intron (NM_017470, intron 1 of 3) 421 NM_017470 54152 Mm.288159 NM_017470 ENSMUSG00000022420 Dnal4 D15Ertd424e|Dnalc4 dynein, axonemal, light chain 4 protein-coding common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-5 chr4 123016269 123016863 + 0.423354874519384 NA promoter-TSS (NM_025873) promoter-TSS (NM_025873) -27 NM_025873 66966 Mm.235030 NM_025873 ENSMUSG00000028653 Trit1 2310075G14Rik|AI314189|AI314635|AV099619|IPPT|IPT|MOD5 tRNA isopentenyltransferase 1 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-7 chr2 32424326 32424892 + 0.423354874519384 NA promoter-TSS (NM_001290558) promoter-TSS (NM_001290558) -543 NM_001290558 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-6 chr2 27802082 27802511 + 0.423354874519384 NA Intergenic Intergenic -84129 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-12 chr6 8209368 8209669 + 0.423354874519384 NA intron (NM_145374, intron 1 of 11) CpG 291 NM_145374 252875 Mm.257151 NM_145374 ENSMUSG00000042447 Mios C81488 meiosis regulator for oocyte development protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-5 chr19 18598661 18599394 + 0.423354874519384 NA intron (NM_017375, intron 2 of 9) intron (NM_017375, intron 2 of 9) 32786 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-5 chr2 34406947 34407268 + 0.423354874519384 NA 5' UTR (NM_177345, exon 1 of 12) 5' UTR (NM_177345, exon 1 of 12) 256 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-2 chr11 96294409 96295024 + 0.423354874519384 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -4358 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-6 chr2 94178526 94178864 + 0.423354874519384 NA Intergenic Intergenic -20786 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-3 chr17 84152547 84153021 + 0.423354874519384 NA Intergenic Intergenic 35163 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-3 chr12 80374116 80374524 + 0.423354874519384 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 17357 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384 chr2 29346893 29347376 + 0.423354874519384 NA intron (NM_029615, intron 1 of 4) CpG 324 NM_029615 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-5 chr19 59588350 59588676 + 0.423354874519384 NA Intergenic Intergenic 95377 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-11 chr5 34169751 34170127 + 0.423354874519384 NA promoter-TSS (NM_001289804) promoter-TSS (NM_001289804) -413 NM_001289803 272158 Mm.319286 NM_181857 ENSMUSG00000045102 Poln POL4P DNA polymerase N protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384 chr1 74016229 74016856 + 0.423354874519384 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 107905 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-9 chr9 121759523 121759921 + 0.423354874519384 NA promoter-TSS (NM_001166644) promoter-TSS (NM_001166644) 221 NR_033503 320301 Mm.373883 NR_033503 E530011L22Rik - RIKEN cDNA E530011L22 gene ncRNA common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-14 chr8 94036693 94037025 + 0.423354874519384 NA promoter-TSS (NM_177767) promoter-TSS (NM_177767) 180 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-7 chr7 39517533 39517946 + 0.423354874519384 NA promoter-TSS (NM_001004139) promoter-TSS (NM_001004139) -27 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding unique_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-3 chr8 77507939 77508604 + 0.423354874519384 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -8785 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-9 chr4 63065933 63066419 + 0.423354874519384 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 87996 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-2 chr10 29143655 29144176 + 0.423354874519384 NA promoter-TSS (NM_026138) promoter-TSS (NM_026138) -81 NM_026138 67412 Mm.390264 NM_026138 ENSMUSG00000038916 Soga3 6330407J23Rik SOGA family member 3 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384 chr11 69921807 69922309 + 0.423354874519384 NA promoter-TSS (NM_001166596) promoter-TSS (NM_001166596) -100 NM_001166593 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding unique_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-2 chr2 34545424 34546095 + 0.423354874519384 NA intron (NM_001290625, intron 7 of 11) intron (NM_001290625, intron 7 of 11) 138908 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-12 chr9 71323246 71323582 + 0.423354874519384 NA Intergenic Intergenic 107625 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-8 chr3 121721901 121722359 + 0.423354874519384 NA Intergenic Intergenic -1407 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384 chr1 131090173 131090840 + 0.423354874519384 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 7337 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-8 chr8 108723012 108723598 + 0.423354874519384 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 8661 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding unique_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-2 chr2 76504066 76504988 + 0.423354874519384 NA intron (NM_001290734, intron 2 of 24) intron (NM_001290734, intron 2 of 24) 5521 NM_001290735 99031 Mm.240435 NM_145525 ENSMUSG00000042359 Osbpl6 1110062M20Rik|AI596402|ORP-6|mKIAA4128 oxysterol binding protein-like 6 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-2 chr1 78657871 78658377 + 0.423354874519384 NA promoter-TSS (NM_001136226) promoter-TSS (NM_001136226) 299 NM_001033606 74205 Mm.276016 NM_028817 ENSMUSG00000032883 Acsl3 2610510B12Rik|Acs3|C85929|Facl3|Pro2194 acyl-CoA synthetase long-chain family member 3 protein-coding common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384 chr12 86891910 86892357 + 0.423354874519384 NA Intergenic CpG -7319 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_42_29_0.239351934600913_5.02656656290898_0.423354874519384-6 chr2 125302414 125302717 + 0.423354874519384 NA intron (NM_007993, intron 65 of 65) intron (NM_007993, intron 65 of 65) 55050 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-13 chr7 16175339 16176012 + 0.423354874519384 NA intron (NM_001277988, intron 1 of 12) C-rich|Low_complexity|Low_complexity 280 NR_102730 17537 Mm.360516 NM_008627 ENSMUSG00000041420 Meis3 AI573393|Mrg2 Meis homeobox 3 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-3 chr12 51377604 51378000 + 0.423354874519384 NA TTS (NM_001167963) TTS (NM_001167963) 289 NM_029825 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-2 chr12 108835263 108835809 + 0.423354874519384 NA intron (NM_181328, intron 1 of 3) CpG 340 NM_181328 214663 Mm.266264 NM_181328 ENSMUSG00000021265 Slc25a29 C030003J19Rik|CACL|mCACL solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-8 chr3 109124059 109124547 + 0.423354874519384 NA intron (NM_172685, intron 1 of 9) intron (NM_172685, intron 1 of 9) 1154 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-9 chr3 159841660 159842485 + 0.423354874519384 NA intron (NM_001356350, intron 1 of 12) intron (NM_001356350, intron 1 of 12) 2422 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding unique_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384 chr1 132133098 132133565 + 0.423354874519384 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 6354 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-10 chr5 36483703 36484061 + 0.423354874519384 NA promoter-TSS (NM_025725) promoter-TSS (NM_025725) 403 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding common_peak1_42_29_0.239351934600913_5.02656656290898_0.423354874519384-16 chrX 129749872 129750648 + 0.423354874519384 NA intron (NM_172493, intron 1 of 26) CpG 518 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding common_peak1_41_29_0.205644100410861_5.00971264581395_0.423354874519384-3 chr10 43693456 43693819 + 0.423354874519384 NA Intergenic Intergenic -52521 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_41_29_0.205644100410861_5.00971264581395_0.423354874519384-6 chr7 34233621 34234037 + 0.423354874519384 NA Intergenic Intergenic -3493 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-10 chr17 26601485 26602018 + 0.423354874519378 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 40239 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-2 chr8 128416187 128416991 + 0.423354874519378 NA intron (NM_001358959, intron 2 of 16) intron (NM_001358959, intron 2 of 16) 57348 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-15 chr8 128487962 128488248 + 0.423354874519378 NA intron (NM_001358959, intron 12 of 16) intron (NM_001358959, intron 12 of 16) 128864 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_34_35_-0.318569008896509_5.01064049699406_0.423354874519378 chr1 186568520 186569123 + 0.423354874519378 NA Intergenic Intergenic -10140 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-4 chr11 115765507 115766026 + 0.423354874519378 NA intron (NM_028014, intron 1 of 31) CpG 333 NM_028014 71947 Mm.23168 NM_028014 ENSMUSG00000020747 Tmem94 2310067B10Rik|Kiaa0195|mKIAA0195 transmembrane protein 94 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-13 chr7 45618995 45619478 + 0.423354874519378 NA exon (NM_008051, exon 2 of 2) exon (NM_008051, exon 2 of 2) 1630 NM_008051 14343 Mm.56933 NM_008051 ENSMUSG00000008461 Fut1 - fucosyltransferase 1 protein-coding common_peak1_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-2 chr12 111573602 111574200 + 0.423354874519378 NA promoter-TSS (NM_022801) promoter-TSS (NM_022801) 501 NR_045295 100504687 Mm.26072 NR_045295 ENSMUSG00000096995 2810029C07Rik AU017849 RIKEN cDNA 2810029C07 gene ncRNA unique_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378 chr9 107337960 107338754 + 0.423354874519378 NA promoter-TSS (NM_133984) promoter-TSS (NM_133984) -7 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-12 chr2 119547770 119548257 + 0.423354874519378 NA promoter-TSS (NM_172857) promoter-TSS (NM_172857) 306 NM_019769 56398 Mm.214765 NM_019769 ENSMUSG00000014077 Chp1 1500003O03Rik|AA960066|AI046351|Cahp|Chp|Sid470p|p24|vac calcineurin-like EF hand protein 1 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-6 chr13 48565905 48566303 + 0.423354874519378 NA Intergenic Intergenic -27832 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-11 chr19 38930430 38930796 + 0.423354874519378 NA promoter-TSS (NM_008234) promoter-TSS (NM_008234) -377 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-2 chr10 88501899 88502504 + 0.423354874519378 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 1769 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-3 chr11 96279518 96280007 + 0.423354874519378 NA Intergenic Intergenic -2143 NM_010461 15416 Mm.4822 NM_010461 ENSMUSG00000056648 Hoxb8 Hox-2.4 homeobox B8 protein-coding common_peak1_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-4 chr9 108479829 108480186 + 0.423354874519378 NA intron (NM_008483, intron 1 of 32) intron (NM_008483, intron 1 of 32) 145 NM_008483 16779 Mm.27560 NM_008483 ENSMUSG00000052911 Lamb2 AW211941|Lamb-2|Lams|npht laminin, beta 2 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-14 chr8 70529517 70530150 + 0.423354874519378 NA intron (NM_001111066, intron 2 of 8) B1F1|SINE|Alu 1987 NM_001199631 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-7 chr13 63657707 63658302 + 0.423354874519378 NA Intergenic Intergenic 76294 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-8 chr14 32201083 32201701 + 0.423354874519378 NA promoter-TSS (NM_001359915) promoter-TSS (NM_001359915) 499 NM_016897 53600 Mm.303703 NM_016897 ENSMUSG00000013701 Timm23 Tim23 translocase of inner mitochondrial membrane 23 protein-coding common_peak1_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-3 chr8 36668113 36668654 + 0.423354874519378 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -54440 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak1_34_35_-0.318569008896509_5.01064049699406_0.423354874519378 chr4 53439747 53440173 + 0.423354874519378 NA promoter-TSS (NM_001159633) promoter-TSS (NM_001159633) -453 NM_001159633 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-9 chr16 20097608 20098048 + 0.423354874519378 NA intron (NM_029436, intron 1 of 7) CpG 274 NM_029436 75785 Mm.392450 NM_029436 ENSMUSG00000062901 Klhl24 1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082 kelch-like 24 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378-5 chr12 85049689 85050410 + 0.423354874519378 NA intron (NM_001347421, intron 14 of 19) intron (NM_001347421, intron 14 of 19) 45566 NM_001361239 73422 Mm.311944 NM_175198 ENSMUSG00000042320 Prox2 1700058C01Rik prospero homeobox 2 protein-coding common_peak2_34_35_-0.318569008896509_5.01064049699406_0.423354874519378 chr1 170175173 170175690 + 0.423354874519378 NA promoter-TSS (NM_001305045) promoter-TSS (NM_001305045) -467 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_148_134_-0.150318200525565_7.00165649678805_0.423220089013176 chr11 8463505 8464699 + 0.423220089013176 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 200433 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_149_134_-0.140736112244312_7.00644754092867_0.423220089013176 chr17 70747097 70748788 + 0.423220089013176 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 98835 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_148_134_-0.150318200525565_7.00165649678805_0.423220089013176-2 chr9 90113543 90114594 + 0.423220089013176 NA intron (NM_001039147, intron 1 of 12) CpG 752 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak2_148_134_-0.150318200525565_7.00165649678805_0.423220089013176 chr9 90113540 90114612 + 0.423220089013176 NA intron (NM_001039147, intron 1 of 12) CpG 744 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak1_114_84_0.146064284839187_6.48242307855729_0.423087080439248-3 chr3 37419947 37421105 + 0.423087080439248 NA promoter-TSS (NM_001291044) promoter-TSS (NM_001291044) 576 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak1_102_94_-0.172268243272721_6.48372148669459_0.423087080439248 chr10 57531450 57532450 + 0.423087080439248 NA intron (NM_019760, intron 1 of 8) intron (NM_019760, intron 1 of 8) 579 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding common_peak1_114_84_0.146064284839187_6.48242307855729_0.423087080439248-2 chr10 117147759 117148850 + 0.423087080439248 NA intron (NM_177798, intron 1 of 9) CpG 170 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak2_102_94_-0.172268243272721_6.48372148669459_0.423087080439248 chr10 120898348 120899386 + 0.423087080439248 NA 5' UTR (NM_177092, exon 1 of 7) 5' UTR (NM_177092, exon 1 of 7) 104 NM_177092 320183 Mm.169755 NM_177092 ENSMUSG00000051236 Msrb3 D430026P16Rik|I-8-23|MsrB2 methionine sulfoxide reductase B3 protein-coding common_peak1_102_94_-0.172268243272721_6.48372148669459_0.423087080439248-3 chr19 24671147 24672273 + 0.423087080439248 NA Intergenic Intergenic -2298 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding common_peak1_114_84_0.146064284839187_6.48242307855729_0.423087080439248 chr1 24099140 24100288 + 0.423087080439248 NA intron (NM_026604, intron 1 of 20) CpG 627 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding common_peak1_102_94_-0.172268243272721_6.48372148669459_0.423087080439248-2 chr18 62547914 62548707 + 0.423087080439248 NA promoter-TSS (NM_177829) promoter-TSS (NM_177829) 553 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak1_63_61_-0.238266225315567_5.83506319772909_0.423037473498598-3 chr7 16405860 16406581 + 0.423037473498598 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 5024 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_63_61_-0.238266225315567_5.83506319772909_0.423037473498598-2 chr11 69368622 69369279 + 0.423037473498598 NA intron (NM_146019, intron 1 of 39) CpG 476 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak2_63_61_-0.238266225315567_5.83506319772909_0.423037473498598-2 chr5 148632894 148633464 + 0.423037473498598 NA Intergenic Intergenic -80391 NM_001359199 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak1_64_61_-0.216056216751127_5.84616820201131_0.423037473498598 chr2 130876016 130876906 + 0.423037473498598 NA intron (NR_015523, intron 1 of 2) intron (NR_015523, intron 1 of 2) 29935 NR_015523 613258 Mm.271990 NR_015523 A730017L22Rik - RIKEN cDNA A730017L22 gene ncRNA common_peak1_63_61_-0.238266225315567_5.83506319772909_0.423037473498598 chr1 118310782 118311441 + 0.423037473498598 NA promoter-TSS (NR_153836) promoter-TSS (NR_153836) 235 NM_011650 22099 Mm.426637 NM_011650 ENSMUSG00000026374 Tsn 2610034C24Rik|AU040286|C3PO|TB-RBP translin protein-coding common_peak2_64_61_-0.216056216751127_5.84616820201131_0.423037473498598 chr15 27418892 27419934 + 0.423037473498598 NA Intergenic Intergenic -47264 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_63_61_-0.238266225315567_5.83506319772909_0.423037473498598 chr17 17838597 17839176 + 0.423037473498598 NA intron (NM_001162909, intron 8 of 8) intron (NM_001162909, intron 8 of 8) 7911 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak2_64_61_-0.216056216751127_5.84616820201131_0.423037473498598-2 chr15 58075800 58076531 + 0.423037473498598 NA 5' UTR (NM_001042438, exon 1 of 5) 5' UTR (NM_001042438, exon 1 of 5) 343 NM_001042438 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding common_peak2_64_61_-0.216056216751127_5.84616820201131_0.423037473498598-3 chr5 72855020 72855745 + 0.423037473498598 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 13066 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak2_73_53_0.16901825932073_5.83939663182383_0.423037473498586-2 chr15 97785944 97786763 + 0.423037473498586 NA intron (NM_026353, intron 1 of 2) intron (NM_026353, intron 1 of 2) 1988 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak2_73_53_0.16901825932073_5.83939663182383_0.423037473498586-3 chr18 42275383 42276258 + 0.423037473498586 NA promoter-TSS (NR_033452) promoter-TSS (NR_033452) 467 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding common_peak1_73_53_0.16901825932073_5.83939663182383_0.423037473498586-2 chr17 24720135 24720941 + 0.423037473498586 NA promoter-TSS (NR_027900) promoter-TSS (NR_027900) -251 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA common_peak1_73_53_0.16901825932073_5.83939663182383_0.423037473498586-5 chr9 50603979 50604912 + 0.423037473498586 NA promoter-TSS (NM_025848) promoter-TSS (NM_025848) 544 NM_013897 30057 Mm.335149 NM_013897 ENSMUSG00000039016 Timm8b Tim8b translocase of inner mitochondrial membrane 8B protein-coding common_peak1_73_53_0.16901825932073_5.83939663182383_0.423037473498586-4 chr6 6112625 6113311 + 0.423037473498586 NA intron (NM_015829, intron 9 of 17) intron (NM_015829, intron 9 of 17) 104205 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_73_53_0.16901825932073_5.83939663182383_0.423037473498586-3 chr3 90052927 90053513 + 0.423037473498586 NA promoter-TSS (NM_001165984) promoter-TSS (NM_001165984) 418 NM_027500 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak1_73_53_0.16901825932073_5.83939663182383_0.423037473498586 chr1 87327070 87327650 + 0.423037473498586 NA intron (NM_146112, intron 1 of 28) CpG 362 NM_001110212 227331 Mm.23065 NM_146112 ENSMUSG00000048000 Gigyf2 2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642 GRB10 interacting GYF protein 2 protein-coding common_peak2_73_53_0.16901825932073_5.83939663182383_0.423037473498586 chr10 68233669 68234572 + 0.423037473498586 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 44606 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_73_53_0.16901825932073_5.83939663182383_0.423037473498586-4 chr8 83737819 83738499 + 0.423037473498586 NA intron (NM_011925, intron 1 of 19) intron (NM_011925, intron 1 of 19) 3152 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_176_157_-0.130599040200214_7.238481228077_0.422987806741144 chr18 67932336 67933887 + 0.422987806741144 NA promoter-TSS (NM_172631) promoter-TSS (NM_172631) -62 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_255_193_0.101907283737691_7.65086648405597_0.422899146981997 chr11 8444448 8446695 + 0.422899146981997 NA intron (NM_001083587, intron 25 of 30) intron (NM_001083587, intron 25 of 30) 218964 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_82_77_-0.197078597971331_6.18686291987658_0.422410945175116 chr3 107333474 107334270 + 0.422410945175116 NA promoter-TSS (NM_001045807) promoter-TSS (NM_001045807) -583 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak1_93_68_0.158081866950641_6.18756539025349_0.422410945175116 chr3 57503672 57504798 + 0.422410945175116 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 71641 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_82_77_-0.197078597971331_6.18686291987658_0.422410945175116-2 chr8 126540033 126540836 + 0.422410945175116 NA Intergenic Intergenic 53002 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_93_68_0.158081866950641_6.18756539025349_0.422410945175116 chr17 84958039 84958947 + 0.422410945175116 NA promoter-TSS (NR_027930) promoter-TSS (NR_027930) 492 NM_001159496 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak2_165_123_0.127072330930799_7.01773247585227_0.422272192329521 chr13 107887940 107889347 + 0.422272192329521 NA intron (NM_145456, intron 2 of 14) CpG 1421 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_164_123_0.118416613618275_7.01340461719601_0.422272192329521 chr1 79759744 79761677 + 0.422272192329521 NA intron (NM_027057, intron 1 of 4) intron (NM_027057, intron 1 of 4) 1059 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding common_peak1_139_103_0.136806315258224_6.7688428757702_0.422164006607571 chr19 3282018 3283575 + 0.422164006607571 NA promoter-TSS (NM_001347420) promoter-TSS (NM_001347420) 214 NM_009212 20589 Mm.3179 NM_009212 ENSMUSG00000024831 Ighmbp2 AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma immunoglobulin mu binding protein 2 protein-coding common_peak1_139_103_0.136806315258224_6.7688428757702_0.422164006607571-2 chr4 139232801 139234209 + 0.422164006607571 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 39394 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_138_103_0.126537333241995_6.76370838476209_0.422164006607571 chr12 111536823 111537882 + 0.422164006607571 NA promoter-TSS (NM_173363) promoter-TSS (NM_173363) -749 NM_178041 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak1_224_169_0.107524150896272_7.46315301158584_0.421973425462599 chr1 181210752 181212979 + 0.421973425462599 NA 5' UTR (NM_145514, exon 1 of 14) 5' UTR (NM_145514, exon 1 of 14) 113 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-7 chr6 34719412 34719765 + 0.421916810733237 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 10144 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-3 chr15 85677465 85677722 + 0.421916810733237 NA Intergenic Intergenic -26180 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-5 chr12 79560177 79560655 + 0.421916810733237 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 263065 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-10 chr8 70138893 70139157 + 0.421916810733237 NA promoter-TSS (NM_001309645) promoter-TSS (NM_001309645) 172 NM_011266 19727 Mm.161167 NM_011266 ENSMUSG00000036120 Rfxank Tvl1 regulatory factor X-associated ankyrin-containing protein protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-11 chr8 107448438 107449002 + 0.421916810733237 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 12322 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-8 chr16 6889514 6889869 + 0.421916810733237 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -149679 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-2 chr1 74387311 74387615 + 0.421916810733237 NA Intergenic Intergenic -4146 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237 chr1 72070949 72071228 + 0.421916810733237 NA Intergenic Intergenic -65893 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-4 chr12 17750239 17750502 + 0.421916810733237 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 59561 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237 chr1 131090461 131090860 + 0.421916810733237 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 7183 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-7 chr14 45851089 45851407 + 0.421916810733237 NA Intergenic Intergenic -193105 NM_001042719 114874 Mm.121918 NM_176845 ENSMUSG00000037697 Ddhd1 Mir5131|PA-PLA1 DDHD domain containing 1 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-3 chr11 102216388 102216723 + 0.421916810733237 NA intron (NM_001361596, intron 3 of 27) intron (NM_001361596, intron 3 of 27) 13595 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-5 chr4 138434739 138435036 + 0.421916810733237 NA intron (NM_026689, intron 1 of 3) CpG 215 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-13 chr9 63377651 63377934 + 0.421916810733237 NA promoter-TSS (NM_011840) promoter-TSS (NM_011840) 60 NM_011840 23938 Mm.325746 NM_011840 ENSMUSG00000058444 Map2k5 AI324775|AI428457|MEK5|Mapkk5|Prkmk5 mitogen-activated protein kinase kinase 5 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-2 chr1 131124282 131124939 + 0.421916810733237 NA Intergenic Intergenic 13624 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding unique_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-3 chr7 143055828 143056235 + 0.421916810733237 NA intron (NM_133655, intron 1 of 7) intron (NM_133655, intron 1 of 7) -2345 NR_110354 97423 Mm.5250 NM_133790 ENSMUSG00000059277 R74862 - expressed sequence R74862 ncRNA common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-12 chr9 56091191 56091596 + 0.421916810733237 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 1417 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding unique_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237 chr14 30695086 30695599 + 0.421916810733237 NA Intergenic Intergenic -19507 NM_019460 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding unique_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-2 chr2 125703301 125703949 + 0.421916810733237 NA intron (NM_199022, intron 1 of 11) intron (NM_199022, intron 1 of 11) 20523 NM_199022 271849 Mm.425101 NM_199022 ENSMUSG00000035109 Shc4 6230417E10Rik|9930029B02Rik|Gm685|RaLP SHC (Src homology 2 domain containing) family, member 4 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-10 chr17 79597969 79598541 + 0.421916810733237 NA Intergenic Intergenic -16645 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-9 chr17 75210176 75210459 + 0.421916810733237 NA intron (NM_019919, intron 5 of 33) intron (NM_019919, intron 5 of 33) 31536 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-6 chr5 125069909 125070352 + 0.421916810733237 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 66655 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237 chr1 133977768 133978265 + 0.421916810733237 NA Intergenic Intergenic -56615 NM_054077 116847 Mm.214514 NM_054077 ENSMUSG00000041577 Prelp 7330409J17Rik|SLRR2A proline arginine-rich end leucine-rich repeat protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-11 chr2 28524300 28524656 + 0.421916810733237 NA intron (NM_009058, intron 1 of 17) intron (NM_009058, intron 1 of 17) -8986 NM_001145835 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding unique_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-5 chr9 50000378 50000827 + 0.421916810733237 NA Intergenic Intergenic -201209 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-14 chr9 70542158 70542508 + 0.421916810733237 NA promoter-TSS (NM_025690) promoter-TSS (NM_025690) -382 NM_001357911 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-12 chr5 111205308 111205635 + 0.421916810733237 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -125226 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-4 chr8 72493514 72493974 + 0.421916810733237 NA TTS (NM_027485) TTS (NM_027485) -1130 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-9 chr8 27234929 27235230 + 0.421916810733237 NA Intergenic Intergenic -5491 NM_013462 11556 Mm.278475 NM_013462 ENSMUSG00000031489 Adrb3 Adrb-3 adrenergic receptor, beta 3 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-6 chr12 110696674 110697067 + 0.421916810733237 NA promoter-TSS (NM_010480) promoter-TSS (NM_010480) -475 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak1_29_20_0.238215122420368_4.51142498398895_0.421916810733237-13 chr6 83317284 83317574 + 0.421916810733237 NA exon (NM_008638, exon 1 of 8) exon (NM_008638, exon 1 of 8) 175 NM_008638 17768 Mm.443 NM_008638 ENSMUSG00000005667 Mthfd2 AW558851|NMDMC methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase protein-coding common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-8 chr8 26825002 26825318 + 0.421916810733237 NA promoter-TSS (NR_045904) promoter-TSS (NR_045904) -737 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_29_20_0.238215122420368_4.51142498398895_0.421916810733237-4 chr18 60722456 60722981 + 0.421916810733237 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 4848 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-9 chr15 73616034 73616408 + 0.421916810733234 NA intron (NM_001033219, intron 1 of 7) intron (NM_001033219, intron 1 of 7) 1103 NM_001357747 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding unique_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-3 chr2 173247527 173247989 + 0.421916810733234 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 28775 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-6 chr11 102697238 102697751 + 0.421916810733234 NA intron (NM_025918, intron 1 of 4) intron (NM_025918, intron 1 of 4) 231 NM_025918 52715 Mm.277638 NM_025918 ENSMUSG00000020925 Ccdc43 2610001E01Rik|D11Ertd707e coiled-coil domain containing 43 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-11 chr16 24183530 24184028 + 0.421916810733234 NA Intergenic Intergenic -101089 NR_155457 108168278 Mm.417246 NR_155457 Gm46545 - predicted gene, 46545 ncRNA common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-13 chr19 40269770 40270112 + 0.421916810733234 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 1675 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding unique_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-6 chr8 91070181 91070719 + 0.421916810733234 NA intron (NM_011250, intron 1 of 21) CpG 393 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 RB transcriptional corepressor like 2 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-10 chr15 84224067 84224408 + 0.421916810733234 NA Intergenic Intergenic -7806 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-3 chr10 89685561 89685970 + 0.421916810733234 NA promoter-TSS (NR_130956) promoter-TSS (NR_130956) 529 NM_001358843 213326 Mm.27651 NM_198021 ENSMUSG00000069539 Scyl2 AU015688|AW536445|BC030932|CVAK104|D10Ertd802e SCY1-like 2 (S. cerevisiae) protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-4 chr10 94035274 94035599 + 0.421916810733234 NA promoter-TSS (NM_053072) promoter-TSS (NM_053072) 306 NM_001304720 215008 Mm.124177 NM_172538 ENSMUSG00000036099 Vezt A630071D13Rik|AI848282 vezatin, adherens junctions transmembrane protein protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-7 chr12 99884639 99884938 + 0.421916810733234 NA intron (NM_028354, intron 1 of 15) CpG 273 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-15 chr5 121619225 121619542 + 0.421916810733234 NA promoter-TSS (NM_178799) promoter-TSS (NM_178799) -445 NM_178799 338350 Mm.482918 NM_178799 ENSMUSG00000042647 Acad12 9330129D05Rik acyl-Coenzyme A dehydrogenase family, member 12 protein-coding common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-7 chr8 94434439 94434915 + 0.421916810733234 NA intron (NR_015514, intron 1 of 2) intron (NR_015514, intron 1 of 2) 426 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-14 chr2 59670673 59670948 + 0.421916810733234 NA intron (NM_001290659, intron 1 of 25) intron (NM_001290659, intron 1 of 25) 24041 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding unique_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-2 chr17 66961589 66961996 + 0.421916810733234 NA intron (NM_001357625, intron 7 of 32) intron (NM_001357625, intron 7 of 32) 64443 NR_049205 100885844 NR_049205 ENSMUSG00000093508 Mir5709 Gm22041|mir-5709|mmu-mir-5709 microRNA 5709 ncRNA common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-6 chr8 44758127 44758608 + 0.421916810733234 NA Intergenic Intergenic -191841 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-12 chr17 81579948 81580475 + 0.421916810733234 NA intron (NR_104580, intron 2 of 8) intron (NR_104580, intron 2 of 8) 158176 NM_001286684 20541 Mm.265834 NM_011406 ENSMUSG00000054640 Slc8a1 AI852629|AV344025|D930008O12Rik|Ncx1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234 chr10 62320618 62321014 + 0.421916810733234 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 19605 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-17 chr6 72550867 72551367 + 0.421916810733234 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 1470 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-18 chr6 83114880 83115353 + 0.421916810733234 NA promoter-TSS (NM_020619) promoter-TSS (NM_020619) -390 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-4 chr7 25785784 25786174 + 0.421916810733234 NA exon (NM_001190974, exon 4 of 19) exon (NM_001190974, exon 4 of 19) 2754 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding unique_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-4 chr3 90084754 90085249 + 0.421916810733234 NA intron (NM_001357581, intron 1 of 8) intron (NM_001357581, intron 1 of 8) 5480 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-16 chr5 151185858 151186478 + 0.421916810733234 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 4025 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234 chr11 96969135 96969636 + 0.421916810733234 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 8303 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-2 chr10 77118615 77118981 + 0.421916810733234 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -5093 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-3 chr2 52623887 52624124 + 0.421916810733234 NA intron (NM_001037099, intron 2 of 13) intron (NM_001037099, intron 2 of 13) 51854 NM_001285428 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234 chr15 32778892 32779255 + 0.421916810733234 NA Intergenic CpG -5921 NR_155440 105245909 Mm.229263 NR_155440 ENSMUSG00000115749 Gm41289 - predicted gene, 41289 ncRNA unique_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-5 chr7 66580433 66580784 + 0.421916810733234 NA Intergenic Intergenic 108953 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-8 chr13 59823359 59823775 + 0.421916810733234 NA promoter-TSS (NM_153538) promoter-TSS (NM_153538) -420 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-5 chr11 101626955 101627374 + 0.421916810733234 NA promoter-TSS (NM_025654) promoter-TSS (NM_025654) -785 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-2 chr15 73435235 73435514 + 0.421916810733234 NA Intergenic Intergenic -12183 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding unique_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234 chr10 24210777 24211361 + 0.421916810733234 NA Intergenic Intergenic -12448 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-19 chr7 34341806 34342071 + 0.421916810733234 NA Intergenic Intergenic 47767 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak1_23_25_-0.389564071695842_4.50565768229317_0.421916810733234-5 chr7 34341755 34342069 + 0.421916810733234 NA Intergenic Intergenic 47793 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak2_292_222_0.0943030747970646_7.84805143731884_0.421901535062903 chr1 132007174 132009462 + 0.421901535062903 NA intron (NM_007923, intron 1 of 4) CpG 713 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak2_115_85_0.141593287101924_6.49706139825306_0.421729484740903 chr5 21498846 21500177 + 0.421729484740903 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -44016 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_115_85_0.141593287101924_6.49706139825306_0.421729484740903 chr12 102878002 102879312 + 0.421729484740903 NA promoter-TSS (NM_172806) promoter-TSS (NM_172806) -251 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding common_peak2_178_159_-0.132650522550855_7.25560283361193_0.421387383888159 chr6 112209226 112211154 + 0.421387383888159 NA promoter-TSS (NR_027865) promoter-TSS (NR_027865) -518 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA common_peak2_126_115_-0.160341373553656_6.77781030835074_0.421056823828402 chr14 43245279 43247040 + 0.421056823828402 NA Intergenic Intergenic 101652 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_140_104_0.133196408290143_6.78084372181119_0.421056823828377 chr1 93479045 93479928 + 0.421056823828377 NA promoter-TSS (NM_133808) promoter-TSS (NM_133808) 425 NM_001159719 18000 Mm.428652 NM_010891 ENSMUSG00000026276 Sept2 AW208991|Nedd-5|Nedd5|mKIAA0158 septin 2 protein-coding common_peak1_74_54_0.161774750855103_5.86224708895221_0.420930521695311 chr1 162133664 162134259 + 0.420930521695311 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -83662 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_75_54_0.180748761447243_5.87173409424828_0.420930521695311-2 chr11 74898136 74898873 + 0.420930521695311 NA intron (NM_177325, intron 2 of 14) intron (NM_177325, intron 2 of 14) 424 NM_177325 104662 Mm.220843 NM_177325 ENSMUSG00000038335 Tsr1 AU040765|AW550801|mKIAA1401 TSR1 20S rRNA accumulation protein-coding common_peak2_75_54_0.180748761447243_5.87173409424828_0.420930521695311 chr15 53129704 53130539 + 0.420930521695311 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 216062 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_75_54_0.180748761447243_5.87173409424828_0.420930521695311 chr1 20616266 20617087 + 0.420930521695311 NA intron (NM_153179, intron 1 of 66) intron (NM_153179, intron 1 of 66) 1381 NM_153179 241035 Mm.249253 NM_153179 ENSMUSG00000043760 Pkhd1 AI118496|AI182499|FPC|Tigm1 polycystic kidney and hepatic disease 1 protein-coding common_peak1_74_54_0.161774750855103_5.86224708895221_0.420930521695311-3 chr8 34613572 34614549 + 0.420930521695311 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 26256 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak1_74_54_0.161774750855103_5.86224708895221_0.420930521695311-2 chr11 53706635 53707425 + 0.420930521695311 NA exon (NM_009012, exon 1 of 25) exon (NM_009012, exon 1 of 25) 289 NM_009012 19360 Mm.4888 NM_009012 ENSMUSG00000020380 Rad50 Mrell|Rad50l RAD50 double strand break repair protein protein-coding common_peak1_65_62_-0.217268918675402_5.86864546416222_0.420930521695299 chr13 75943314 75944094 + 0.420930521695299 NA 5' UTR (NM_028493, exon 1 of 12) 5' UTR (NM_028493, exon 1 of 12) 120 NM_028493 73296 Mm.276200 NM_028493 ENSMUSG00000021589 Rhobtb3 1700040C17Rik|2610033K01Rik|4930503C18Rik|AI317148|AW208826|mKIAA0878 Rho-related BTB domain containing 3 protein-coding common_peak2_65_62_-0.217268918675402_5.86864546416222_0.420930521695299-2 chr7 24507079 24507788 + 0.420930521695299 NA non-coding (NR_110958, exon 1 of 3) non-coding (NR_110958, exon 1 of 3) 346 NR_110958 232969 Mm.181332 NM_146183 ENSMUSG00000064264 Zfp428 2410005H09Rik|AV271806|AW047854|Znf428 zinc finger protein 428 protein-coding common_peak1_65_62_-0.217268918675402_5.86864546416222_0.420930521695299-2 chr13 107328117 107329089 + 0.420930521695299 NA Intergenic Intergenic -141219 NR_045083 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA common_peak2_65_62_-0.217268918675402_5.86864546416222_0.420930521695299 chr1 172082869 172083448 + 0.420930521695299 NA promoter-TSS (NM_021607) promoter-TSS (NM_021607) -409 NM_021607 59287 Mm.218203 NM_021607 ENSMUSG00000003458 Ncstn 9430068N19Rik|AA727311|Aph2|D1Dau13e|Kiaa0253|Nct|mKIAA0253 nicastrin protein-coding common_peak2_94_69_0.152482356780815_6.20552419533537_0.420757421015467-2 chr8 104534007 104534747 + 0.420757421015467 NA promoter-TSS (NM_001301164) promoter-TSS (NM_001301164) 260 NM_144931 234664 Mm.237670 NM_144931 ENSMUSG00000031878 Nae1 59kDa|Appbp1 NEDD8 activating enzyme E1 subunit 1 protein-coding common_peak1_83_78_-0.198301031730967_6.20463023231162_0.420757421015467 chr7 74279713 74280437 + 0.420757421015467 NA intron (NM_001038643, intron 10 of 10) intron (NM_001038643, intron 10 of 10) -266393 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_83_78_-0.198301031730967_6.20463023231162_0.420757421015467 chr3 54735059 54736104 + 0.420757421015467 NA promoter-TSS (NM_025442) promoter-TSS (NM_025442) 42 NM_025442 66248 Mm.144218 NM_025442 ENSMUSG00000036632 Alg5 1500026A19Rik|2600005J22Rik|AV009521|AV170001|AW545564 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) protein-coding common_peak2_94_69_0.152482356780815_6.20552419533537_0.420757421015467 chr15 97778539 97779523 + 0.420757421015467 NA Intergenic Intergenic -5334 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak1_94_69_0.152482356780815_6.20552419533537_0.420757421015467 chr1 4857715 4858386 + 0.420757421015467 NA promoter-TSS (NM_001159751) promoter-TSS (NM_001159751) -278 NM_001159751 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-7 chr5 36712325 36713032 + 0.420706537898431 NA Intergenic Intergenic -16657 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak2_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-3 chr18 56974868 56975519 + 0.420706537898431 NA intron (NM_029909, intron 1 of 4) CpG 186 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding common_peak2_49_48_-0.2524109819629_5.48850435313376_0.420706537898431 chr12 51377613 51378594 + 0.420706537898431 NA intron (NM_001306178, intron 1 of 13) intron (NM_001306178, intron 1 of 13) 590 NM_029825 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding common_peak1_49_48_-0.2524109819629_5.48850435313376_0.420706537898431 chr1 88277267 88277548 + 0.420706537898431 NA exon (NM_198652, exon 1 of 8) exon (NM_198652, exon 1 of 8) 150 NM_172505 212427 Mm.384762 NM_172505 A730008H23Rik Fleg1 RIKEN cDNA A730008H23 gene protein-coding common_peak2_57_41_0.182595598598506_5.48361522207801_0.420706537898431-2 chr7 28013699 28014576 + 0.420706537898431 NA promoter-TSS (NM_001254951) promoter-TSS (NM_001254951) -22 NM_001254951 100043772 Mm.129275 NM_001100456 ENSMUSG00000096916 Zfp850 C130069I09Rik|Gm4636 zinc finger protein 850 protein-coding common_peak2_58_41_0.207083662543919_5.49585925405072_0.420706537898431-2 chr19 16132166 16132527 + 0.420706537898431 NA promoter-TSS (NM_008139) promoter-TSS (NM_008139) -485 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak1_57_41_0.182595598598506_5.48361522207801_0.420706537898431-3 chr16 46008821 46009805 + 0.420706537898431 NA intron (NM_001134480, intron 1 of 3) intron (NM_001134480, intron 1 of 3) 1100 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak2_58_41_0.207083662543919_5.49585925405072_0.420706537898431 chr14 28035368 28036006 + 0.420706537898431 NA intron (NM_001347497, intron 12 of 19) intron (NM_001347497, intron 12 of 19) 413280 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding common_peak2_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-4 chr4 107468629 107469108 + 0.420706537898431 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 34149 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_57_41_0.182595598598506_5.48361522207801_0.420706537898431-3 chr9 44905277 44905743 + 0.420706537898431 NA Intergenic Intergenic 15232 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak2_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-5 chr4 109000727 109001290 + 0.420706537898431 NA exon (NM_001347169, exon 1 of 33) exon (NM_001347169, exon 1 of 33) 353 NM_146150 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-5 chr3 57509963 57510385 + 0.420706537898431 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 65702 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_57_41_0.182595598598506_5.48361522207801_0.420706537898431-2 chr12 21285470 21286129 + 0.420706537898431 NA promoter-TSS (NM_018813) promoter-TSS (NM_018813) 485 NM_008403 16413 Mm.273333 NM_008403 ENSMUSG00000062352 Itgb1bp1 AI449260|AU019480|Icap1 integrin beta 1 binding protein 1 protein-coding common_peak1_57_41_0.182595598598506_5.48361522207801_0.420706537898431-5 chr7 109608141 109609008 + 0.420706537898431 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 7994 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-6 chr8 80856867 80857305 + 0.420706537898431 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 23393 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-8 chr7 37562533 37563549 + 0.420706537898431 NA intron (NM_172385, intron 4 of 5) intron (NM_172385, intron 4 of 5) 206711 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_57_41_0.182595598598506_5.48361522207801_0.420706537898431-4 chr4 45467335 45468522 + 0.420706537898431 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -59162 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_57_41_0.182595598598506_5.48361522207801_0.420706537898431 chr15 85533831 85534259 + 0.420706537898431 NA Intergenic Intergenic -30818 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431 chr13 34002147 34002750 + 0.420706537898431 NA promoter-TSS (NM_009068) promoter-TSS (NM_009068) 85 NM_001359997 19766 Mm.374799 NM_009068 ENSMUSG00000021408 Ripk1 D330015H01Rik|RIP|RIP-1|Rinp|Rip1 receptor (TNFRSF)-interacting serine-threonine kinase 1 protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-2 chr15 10759210 10759990 + 0.420706537898431 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 44700 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-6 chr4 12140389 12140950 + 0.420706537898431 NA intron (NM_028226, intron 1 of 2) CpG 552 NM_028226 72397 Mm.430709 NM_028226 ENSMUSG00000046667 Rbm12b1 3000004N20Rik|Rbm12b|Rbm12ba RNA binding motif protein 12 B1 protein-coding common_peak1_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-4 chr15 77834752 77835759 + 0.420706537898431 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 6920 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_57_41_0.182595598598506_5.48361522207801_0.420706537898431 chr1 138571808 138572394 + 0.420706537898431 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 47656 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-3 chr13 75798598 75799239 + 0.420706537898431 NA Intergenic Intergenic -40967 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-5 chr8 117157360 117157774 + 0.420706537898431 NA promoter-TSS (NM_001081151) promoter-TSS (NM_001081151) -568 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak2_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-2 chr13 54101428 54102118 + 0.420706537898431 NA intron (NM_027324, intron 8 of 10) intron (NM_027324, intron 8 of 10) 29928 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-4 chr18 80470101 80470658 + 0.420706537898431 NA promoter-TSS (NM_026295) promoter-TSS (NM_026295) -712 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak1_49_48_-0.2524109819629_5.48850435313376_0.420706537898431-2 chr11 101278356 101278876 + 0.420706537898431 NA promoter-TSS (NM_026562) promoter-TSS (NM_026562) 332 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding common_peak1_58_41_0.207083662543919_5.49585925405072_0.420706537898431-3 chr18 42261428 42262087 + 0.420706537898431 NA intron (NM_134137, intron 1 of 31) intron (NM_134137, intron 1 of 31) 314 NM_134137 107045 Mm.312170 NM_134137 ENSMUSG00000024493 Lars 2310045K21Rik|3110009L02Rik|AW536573|mKIAA1352 leucyl-tRNA synthetase protein-coding common_peak2_117_86_0.149402609900707_6.51764480079908_0.420401771970347 chr9 65032353 65033190 + 0.420401771970347 NA intron (NM_028906, intron 1 of 20) CpG 313 NM_028906 74388 Mm.202749 NM_028906 ENSMUSG00000032393 Dpp8 2310004I03Rik|4932434F09Rik|AI666706|DPP VIII dipeptidylpeptidase 8 protein-coding common_peak2_104_96_-0.174776226987113_6.51252472869357_0.420401771970347 chr8 85840363 85841315 + 0.420401771970347 NA promoter-TSS (NM_199446) promoter-TSS (NM_199446) 110 NM_028007 71927 Mm.61018 NM_028007 ENSMUSG00000031703 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 protein-coding common_peak1_394_339_-0.0862763302550356_8.36625277101018_0.419999673989821 chr17 23673566 23676709 + 0.419999673989821 NA TTS (NM_013749) TTS (NM_013749) -1260 NM_001357380 386612 Mm.328831 NM_001008425 ENSMUSG00000041319 Thoc6 F830014G06Rik|Wdr58 THO complex 6 protein-coding common_peak2_127_116_-0.161489614085341_6.78961991254073_0.419969705660413 chr1 106795461 106796659 + 0.419969705660413 NA intron (NM_009190, intron 1 of 10) intron (NM_009190, intron 1 of 10) 665 NM_009190 20479 Mm.18705 NM_009190 ENSMUSG00000009907 Vps4b 8030489C12Rik|Skd1 vacuolar protein sorting 4B protein-coding common_peak1_127_116_-0.161489614085341_6.78961991254073_0.419969705660413 chr19 53600042 53601483 + 0.419969705660413 NA intron (NM_007790, intron 1 of 28) CpG 366 NM_007790 13006 Mm.14910 NM_007790 ENSMUSG00000024974 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD structural maintenance of chromosomes 3 protein-coding common_peak1_242_213_-0.114303910619322_7.68431503109149_0.419932626730078 chr16 23224627 23227118 + 0.419932626730078 NA promoter-TSS (NM_001252505) promoter-TSS (NM_001252505) -149 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632 chr10 24397987 24398807 + 0.419637632935632 NA Intergenic Intergenic 174880 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_43_30_0.224979092210186_5.06668585649197_0.419637632935632-3 chr4 119422439 119422767 + 0.419637632935632 NA promoter-TSS (NM_001355214) promoter-TSS (NM_001355214) -81 NM_001014900 332934 Mm.388911 NM_001014900 ENSMUSG00000070806 Zmynd12 AI414736 zinc finger, MYND domain containing 12 protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-4 chr13 38960102 38960441 + 0.419637632935632 NA promoter-TSS (NR_131019) promoter-TSS (NR_131019) 266 NM_001170430 108652 Mm.255506 NM_134060 ENSMUSG00000021432 Slc35b3 4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2 solute carrier family 35, member B3 protein-coding common_peak2_43_30_0.224979092210186_5.06668585649197_0.419637632935632-2 chr18 74778274 74778742 + 0.419637632935632 NA promoter-TSS (NR_028560) promoter-TSS (NR_028560) -53 NR_028560 100217466 NR_028560 Scarna17 MBII-119 small Cajal body-specific RNA 17 ncRNA common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-10 chr9 41489458 41490295 + 0.419637632935632 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) 14983 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-9 chr8 105758040 105758580 + 0.419637632935632 NA intron (NM_027469, intron 1 of 2) CpG 297 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding common_peak2_43_30_0.224979092210186_5.06668585649197_0.419637632935632-5 chr8 22398077 22398550 + 0.419637632935632 NA promoter-TSS (NR_045473) promoter-TSS (NR_045473) -36 NM_001358971 18408 Mm.200907 NM_181325 ENSMUSG00000031482 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-2 chr10 58323596 58324100 + 0.419637632935632 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) 301 NM_026148 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_43_30_0.224979092210186_5.06668585649197_0.419637632935632 chr1 195131126 195131401 + 0.419637632935632 NA exon (NM_001355060, exon 1 of 10) exon (NM_001355060, exon 1 of 10) 307 NM_001355060 12946 Mm.301652 NM_013499 ENSMUSG00000016481 Cr1l Crry|Mcp|mCRY complement component (3b/4b) receptor 1-like protein-coding common_peak2_43_30_0.224979092210186_5.06668585649197_0.419637632935632-4 chr7 123369384 123369808 + 0.419637632935632 NA intron (NM_001316713, intron 1 of 19) CpG 319 NM_001122643 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding unique_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632 chr8 64689819 64690652 + 0.419637632935632 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 2874 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-8 chr3 121594869 121595671 + 0.419637632935632 NA Intergenic Intergenic 48215 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-5 chr14 27069437 27069932 + 0.419637632935632 NA intron (NM_134437, intron 1 of 12) intron (NM_134437, intron 1 of 12) 30683 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-6 chr18 10617851 10618218 + 0.419637632935632 NA intron (NM_009226, intron 1 of 3) CpG 238 NM_009226 20641 Mm.603 NM_009226 ENSMUSG00000002477 Snrpd1 AA407109|AL023031|SMD1 small nuclear ribonucleoprotein D1 protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-7 chr2 59670733 59671177 + 0.419637632935632 NA intron (NM_001290659, intron 1 of 25) intron (NM_001290659, intron 1 of 25) 24186 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_43_30_0.224979092210186_5.06668585649197_0.419637632935632-3 chr11 118327633 118328305 + 0.419637632935632 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) 14565 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding common_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-5 chr18 37935019 37935427 + 0.419637632935626 NA exon (NM_001305980, exon 1 of 28) exon (NM_001305980, exon 1 of 28) 253 NM_001305981 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak1_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-2 chr2 121600267 121600751 + 0.419637632935626 NA intron (NM_001360084, intron 1 of 13) intron (NM_001360084, intron 1 of 13) 93786 NM_001290986 241627 Mm.293284 NM_030234 ENSMUSG00000027242 Wdr76 5830411K18Rik|6030457D09|AA517836 WD repeat domain 76 protein-coding common_peak1_35_36_-0.317742116956246_5.05058230715083_0.419637632935626 chr1 173912631 173912944 + 0.419637632935626 NA intron (NM_001033450, intron 1 of 6) intron (NM_001033450, intron 1 of 6) 259 NM_001301745 381308 Mm.490248 NM_001033450 ENSMUSG00000026536 Ifi211 A730048F03|Ifi205b|Mnda|ifi-205-B interferon activated gene 211 protein-coding common_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626 chr12 9838265 9839047 + 0.419637632935626 NA Intergenic Intergenic 264214 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding unique_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626 chr3 84039245 84040024 + 0.419637632935626 NA intron (NM_172681, intron 1 of 34) CpG 527 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 Tmem131l D930015E06Rik|Kiaa0922|mKIAA0922 transmembrane 131 like protein-coding common_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-4 chr13 15807349 15807876 + 0.419637632935626 NA intron (NR_046131, intron 1 of 4) intron (NR_046131, intron 1 of 4) 369 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-3 chr12 83596425 83597166 + 0.419637632935626 NA intron (NM_001359167, intron 1 of 12) intron (NM_001359167, intron 1 of 12) 427 NM_001359167 217695 Mm.59257 NM_183154 ENSMUSG00000042628 Zfyve1 DFCP1|G630053K23|TAFF1|ZNFN2A1|mKIAA1589 zinc finger, FYVE domain containing 1 protein-coding common_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-6 chr7 145107097 145107699 + 0.419637632935626 NA Intergenic Intergenic 100721 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-2 chr12 17348014 17348664 + 0.419637632935626 NA promoter-TSS (NM_001008421) promoter-TSS (NM_001008421) -154 NM_001008421 217431 Mm.27536 NM_001008421 ENSMUSG00000061458 Nol10 Gm67 nucleolar protein 10 protein-coding common_peak1_35_36_-0.317742116956246_5.05058230715083_0.419637632935626-3 chr6 72616922 72617251 + 0.419637632935626 NA promoter-TSS (NM_009444) promoter-TSS (NM_009444) -86 NM_009443 22134 Mm.246563 NM_009443 ENSMUSG00000056429 Tgoln1 AU015504|D6Ertd384e|TGN38|TGN38A|Ttgn1 trans-golgi network protein protein-coding common_peak1_298_227_0.0913514587223414_7.87856574352591_0.419328795176733 chr10 60821901 60824374 + 0.419328795176733 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 8444 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_85_79_-0.182740544251174_6.23055782276178_0.419148369111222 chr19 53552551 53553525 + 0.419148369111222 NA Intergenic Intergenic 23720 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_96_70_0.161863434906396_6.23067883695788_0.419148369111222-2 chr12 80132007 80132828 + 0.419148369111222 NA intron (NR_033514, intron 1 of 2) intron (NR_033514, intron 1 of 2) 427 NR_033514 69548 Mm.269712 NR_033514 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak1_85_79_-0.182740544251174_6.23055782276178_0.419148369111222-2 chr2 156863122 156863900 + 0.419148369111222 NA promoter-TSS (NR_015591) promoter-TSS (NR_015591) 389 NM_026124 67388 Mm.29264 NM_026124 ENSMUSG00000027637 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene protein-coding common_peak1_96_70_0.161863434906396_6.23067883695788_0.419148369111222 chr10 85184621 85185766 + 0.419148369111222 NA promoter-TSS (NM_007771) promoter-TSS (NM_007771) -139 NM_007771 12952 Mm.26237 NM_007771 ENSMUSG00000020038 Cry1 AU020726|AU021000|Phll1 cryptochrome 1 (photolyase-like) protein-coding common_peak1_85_79_-0.182740544251174_6.23055782276178_0.419148369111222-4 chr5 137501665 137502517 + 0.419148369111222 NA intron (NM_028753, intron 1 of 1) intron (NM_028753, intron 1 of 1) 338 NM_028753 74097 Mm.290242 NM_028753 ENSMUSG00000029715 Pop7 0610037N12Rik|AI852017|Rpp20 processing of precursor 7, ribonuclease P family, (S. cerevisiae) protein-coding common_peak1_85_79_-0.182740544251174_6.23055782276178_0.419148369111222-3 chr2 180453953 180454911 + 0.419148369111222 NA Intergenic Intergenic -1813 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_96_70_0.161863434906396_6.23067883695788_0.419148369111222-5 chr3 10330608 10331561 + 0.419148369111222 NA TTS (NM_001010834) TTS (NM_001010834) 355 NM_001310433 55980 Mm.183042 NM_018864 ENSMUSG00000027531 Impa1 2610002K09Rik|2900059K10Rik|AI325909 inositol (myo)-1(or 4)-monophosphatase 1 protein-coding common_peak1_96_70_0.161863434906396_6.23067883695788_0.419148369111222-3 chr18 75387606 75388650 + 0.419148369111222 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 20763 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_96_70_0.161863434906396_6.23067883695788_0.419148369111222-4 chr2 48813491 48814730 + 0.419148369111222 NA promoter-TSS (NM_007396) promoter-TSS (NM_007396) 1 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_85_79_-0.182740544251174_6.23055782276178_0.419148369111222 chr10 80561215 80561757 + 0.419148369111222 NA promoter-TSS (NM_025852) promoter-TSS (NM_025852) 74 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding common_peak2_105_97_-0.175994768418592_6.52671245990591_0.419102965727316-3 chr4 58205603 58206923 + 0.419102965727316 NA exon (NM_022814, exon 1 of 48) exon (NM_022814, exon 1 of 48) 333 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak2_105_97_-0.175994768418592_6.52671245990591_0.419102965727316 chr1 182340875 182341630 + 0.419102965727316 NA intron (NM_175127, intron 1 of 4) CpG 354 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_105_97_-0.175994768418592_6.52671245990591_0.419102965727316 chr10 120898318 120899407 + 0.419102965727316 NA 5' UTR (NM_177092, exon 1 of 7) 5' UTR (NM_177092, exon 1 of 7) 109 NM_177092 320183 Mm.169755 NM_177092 ENSMUSG00000051236 Msrb3 D430026P16Rik|I-8-23|MsrB2 methionine sulfoxide reductase B3 protein-coding common_peak2_105_97_-0.175994768418592_6.52671245990591_0.419102965727316-2 chr18 46741648 46742569 + 0.419102965727316 NA promoter-TSS (NM_026217) promoter-TSS (NM_026217) 232 NM_009681 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding common_peak1_182_162_-0.127791462273991_7.28483242309408_0.419064009150694 chr15 62285719 62287390 + 0.419064009150694 NA Intergenic Intergenic -67103 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_129_117_-0.151557935299338_6.80686408171217_0.418902111358517 chr11 21238324 21239644 + 0.418902111358517 NA promoter-TSS (NM_139061) promoter-TSS (NM_139061) -48 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_129_117_-0.151557935299338_6.80686408171217_0.418902111358517-3 chr4 64045386 64047009 + 0.418902111358517 NA intron (NM_011607, intron 1 of 25) intron (NM_011607, intron 1 of 25) 818 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak2_129_117_-0.151557935299338_6.80686408171217_0.418902111358517-2 chr16 55966026 55967543 + 0.418902111358517 NA intron (NM_024218, intron 2 of 5) intron (NM_024218, intron 2 of 5) 509 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding common_peak2_66_63_-0.218446982359612_5.89077650882019_0.418895159650009-2 chr2 152735262 152735790 + 0.418895159650009 NA promoter-TSS (NM_010495) promoter-TSS (NM_010495) -725 NM_010495 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak2_66_63_-0.218446982359612_5.89077650882019_0.418895159650009-3 chr5 136465179 136466024 + 0.418895159650009 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -89798 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA common_peak1_66_63_-0.218446982359612_5.89077650882019_0.418895159650009-3 chr4 123749499 123750208 + 0.418895159650009 NA intron (NM_023423, intron 1 of 4) CpG 446 NM_023423 68050 Mm.27903 NM_023423 ENSMUSG00000023075 Akirin1 6330407G11Rik akirin 1 protein-coding common_peak1_76_55_0.173479530113585_5.8940946871144_0.418895159650009 chr3 95217457 95218221 + 0.418895159650009 NA TTS (NM_019914) TTS (NM_019914) 103 NM_172512 213054 Mm.224820 NM_029885 ENSMUSG00000038766 Gabpb2 1810015F01Rik|5830427M07|9430006E19Rik|A430024B14Rik|AV050852|Gabpb2-1 GA repeat binding protein, beta 2 protein-coding common_peak2_66_63_-0.218446982359612_5.89077650882019_0.418895159650009-4 chr5 142928704 142929578 + 0.418895159650009 NA Intergenic Intergenic -22387 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_66_63_-0.218446982359612_5.89077650882019_0.418895159650009 chr1 151064986 151066226 + 0.418895159650009 NA Intergenic Intergenic -72171 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak2_76_55_0.173479530113585_5.8940946871144_0.418895159650009 chr6 142362391 142363447 + 0.418895159650009 NA TTS (NM_183165) TTS (NM_183165) 17222 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_66_63_-0.218446982359612_5.89077650882019_0.418895159650009 chr11 117076525 117077543 + 0.418895159650009 NA promoter-TSS (NR_105853) promoter-TSS (NR_105853) 251 NR_027059 76972 Mm.309167 NR_027059 ENSMUSG00000086859 Snhg20 2810008D09Rik small nucleolar RNA host gene 20 ncRNA common_peak1_76_55_0.173479530113585_5.8940946871144_0.418895159650009-2 chr5 123014994 123015896 + 0.418895159650009 NA exon (NM_175423, exon 1 of 2) exon (NM_175423, exon 1 of 2) 371 NM_175423 109305 Mm.218582 NM_175423 ENSMUSG00000049686 Orai1 D730049H07Rik|Tmem142a|orai-1 ORAI calcium release-activated calcium modulator 1 protein-coding common_peak1_66_63_-0.218446982359612_5.89077650882019_0.418895159650009-2 chr16 55635067 55636218 + 0.418895159650009 NA Intergenic Intergenic 140911 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_245_215_-0.11014731190882_7.69981384620906_0.418786075349161 chr15 62037757 62040005 + 0.418786075349161 NA promoter-TSS (NR_132746) promoter-TSS (NR_132746) -376 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_245_215_-0.11014731190882_7.69981384620906_0.418786075349161 chr1 155243833 155245558 + 0.418786075349161 NA Intergenic CpG 85992 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_213_188_-0.117131366765157_7.50367674083849_0.418630755763362 chr11 31552748 31555129 + 0.418630755763362 NA Intergenic Intergenic 117924 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_154_139_-0.14623155821155_7.05616723783919_0.41862329514488 chr6 115807739 115808994 + 0.41862329514488 NA promoter-TSS (NR_028546) promoter-TSS (NR_028546) -263 NR_028546 100217451 Mm.484708 NR_028546 ENSMUSG00000064563 Snora7a MBI-141 small nucleolar RNA, H/ACA box 7A snoRNA common_peak1_169_127_0.115377796943842_7.05768889847192_0.41862329514488 chr2 181519951 181521497 + 0.41862329514488 NA intron (NR_073369, intron 1 of 5) CpG 239 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-7 chr9 13826508 13827019 + 0.418071017975767 NA promoter-TSS (NM_001358259) promoter-TSS (NM_001358259) 290 NR_037622 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak1_59_42_0.197212810923787_5.52487116016399_0.418071017975767-3 chr5 100429760 100430245 + 0.418071017975767 NA promoter-TSS (NR_034038) promoter-TSS (NR_034038) -467 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-7 chr2 128458117 128458944 + 0.418071017975767 NA Intergenic Intergenic -29179 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-2 chr14 7867509 7867891 + 0.418071017975767 NA exon (NM_134080, exon 2 of 46) exon (NM_134080, exon 2 of 46) 49743 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_59_42_0.197212810923787_5.52487116016399_0.418071017975767 chr11 12463877 12464826 + 0.418071017975767 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 609 NM_172496 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak1_59_42_0.197212810923787_5.52487116016399_0.418071017975767-2 chr15 79690909 79691496 + 0.418071017975767 NA intron (NM_013818, intron 1 of 11) CpG 306 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak1_59_42_0.197212810923787_5.52487116016399_0.418071017975767 chr12 111446689 111447657 + 0.418071017975767 NA intron (NM_009396, intron 3 of 11) intron (NM_009396, intron 3 of 11) 4512 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-3 chr19 57360114 57360584 + 0.418071017975767 NA promoter-TSS (NM_145505) promoter-TSS (NM_145505) 550 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767 chr12 71831854 71832316 + 0.418071017975767 NA intron (NM_026102, intron 1 of 25) C-rich|Low_complexity|Low_complexity 1017 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak1_59_42_0.197212810923787_5.52487116016399_0.418071017975767-4 chr7 133099699 133100483 + 0.418071017975767 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -18231 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-9 chr9 120935433 120936470 + 0.418071017975767 NA intron (NM_007614, intron 1 of 14) intron (NM_007614, intron 1 of 14) 2373 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding unique_peak1_59_42_0.197212810923787_5.52487116016399_0.418071017975767 chr5 36795971 36796722 + 0.418071017975767 NA exon (NM_026242, exon 1 of 2) exon (NM_026242, exon 1 of 2) 408 NM_026242 67568 Mm.332336 NM_026242 ENSMUSG00000055302 Mrfap1 9130413I22Rik|AL022827|Pam14 Morf4 family associated protein 1 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-2 chr11 6626226 6626845 + 0.418071017975767 NA promoter-TSS (NM_001130457) promoter-TSS (NM_001130457) -468 NM_134011 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-3 chr12 86834171 86834618 + 0.418071017975767 NA Intergenic Intergenic 50420 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-8 chrX 6415964 6416913 + 0.418071017975767 NA intron (NM_001313764, intron 1 of 8) MIRb|SINE|MIR 696 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-6 chr2 13372713 13373358 + 0.418071017975767 NA intron (NM_001081084, intron 31 of 66) intron (NM_001081084, intron 31 of 66) -101620 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-4 chr14 7848043 7848908 + 0.418071017975767 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 30518 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767 chr1 169694387 169695370 + 0.418071017975767 NA 3' UTR (NM_009063, exon 5 of 5) 3' UTR (NM_009063, exon 5 of 5) 39377 NM_009063 19737 Mm.20954 NM_009063 ENSMUSG00000026678 Rgs5 1110070A02Rik regulator of G-protein signaling 5 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-5 chr19 23273446 23273778 + 0.418071017975767 NA intron (NM_001252684, intron 1 of 24) CpG 285 NM_153808 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-4 chr2 130450331 130450856 + 0.418071017975767 NA intron (NM_001355161, intron 1 of 21) CpG 315 NM_001355161 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak2_59_42_0.197212810923787_5.52487116016399_0.418071017975767-2 chr16 23318778 23319332 + 0.418071017975767 NA intron (NM_001252505, intron 3 of 7) intron (NM_001252505, intron 3 of 7) 28585 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-6 chr7 84689284 84689878 + 0.418071017975767 NA promoter-TSS (NR_038175) promoter-TSS (NR_038175) -59 NR_038175 72495 Mm.382914 NR_038175 ENSMUSG00000085236 2610206C17Rik - RIKEN cDNA 2610206C17 gene ncRNA common_peak2_59_42_0.197212810923787_5.52487116016399_0.418071017975767-3 chr5 136170210 136170932 + 0.418071017975767 NA promoter-TSS (NM_178751) promoter-TSS (NM_178751) 85 NM_178751 269717 Mm.308396 NM_178751 ENSMUSG00000039747 Orai2 A730041O15Rik|Tmem142b ORAI calcium release-activated calcium modulator 2 protein-coding common_peak1_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-8 chr3 152477945 152478512 + 0.418071017975767 NA intron (NM_001081277, intron 12 of 13) intron (NM_001081277, intron 12 of 13) 81544 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak2_50_49_-0.253189730210818_5.51726132466931_0.418071017975767-5 chr5 123930368 123931188 + 0.418071017975767 NA promoter-TSS (NM_001134767) promoter-TSS (NM_001134767) 89 NM_001134767 208908 Mm.243679 NM_001134767 ENSMUSG00000061882 Ccdc62 AI661708|G1-485-3|Gm150|repro29 coiled-coil domain containing 62 protein-coding common_peak2_143_107_0.122713787362748_6.81624439584484_0.417853519443451 chr5 36694950 36696381 + 0.417853519443451 NA intron (NM_001081232, intron 1 of 8) CpG 356 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak2_106_98_-0.177190583050451_6.54076132855438_0.417832131711369 chr6 140622976 140623874 + 0.417832131711369 NA promoter-TSS (NM_009637) promoter-TSS (NM_009637) -77 NM_001005605 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_266_202_0.0967519318689636_7.71371188311966_0.417661429343373 chr2 32151218 32153558 + 0.417661429343373 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 1240 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_97_71_0.156378162350499_6.24811408261756_0.417582018066374 chr7 29981100 29981770 + 0.417582018066374 NA Intergenic Intergenic -2520 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak2_86_80_-0.184101379279904_6.24779931324467_0.417582018066374-2 chr8 78820383 78821455 + 0.417582018066374 NA intron (NM_001191004, intron 1 of 4) CpG 233 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_86_80_-0.184101379279904_6.24779931324467_0.417582018066374 chr8 47675379 47676560 + 0.417582018066374 NA promoter-TSS (NM_023503) promoter-TSS (NM_023503) -810 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak1_86_80_-0.184101379279904_6.24779931324467_0.417582018066374 chr15 78934920 78935456 + 0.417582018066374 NA intron (NM_133800, intron 1 of 5) CpG 255 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak1_97_71_0.156378162350499_6.24811408261756_0.417582018066374 chr1 166001483 166002640 + 0.417582018066374 NA intron (NM_198932, intron 1 of 15) CpG 573 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_215_190_-0.118991936282078_7.51793285989471_0.417344870654763 chr8 71380913 71381937 + 0.417344870654763 NA 5' UTR (NM_010150, exon 1 of 4) 5' UTR (NM_010150, exon 1 of 4) 527 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-5 chr4 35226311 35226580 + 0.417187467413082 NA promoter-TSS (NM_001081343) promoter-TSS (NM_001081343) -565 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585|C9orf72 RIKEN cDNA 3110043O21 gene protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-6 chr4 54948106 54948326 + 0.417187467413082 NA 5' UTR (NM_172867, exon 1 of 13) 5' UTR (NM_172867, exon 1 of 13) 271 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-2 chr10 67866187 67866648 + 0.417187467413082 NA Intergenic ID_B1|SINE|B4 46245 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-17 chr8 3621614 3621913 + 0.417187467413082 NA promoter-TSS (NM_026156) promoter-TSS (NM_026156) 212 NM_001195244 100503890 Mm.254898 NM_001195244 ENSMUSG00000087687 Pet100 2900053A13Rik PET100 homolog protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-3 chr11 43921626 43921872 + 0.417187467413082 NA Intergenic Intergenic -20512 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-8 chr15 39771366 39771587 + 0.417187467413082 NA intron (NM_022722, intron 9 of 9) intron (NM_022722, intron 9 of 9) 25546 NM_001289508 75766 Mm.159563 NM_029422 ENSMUSG00000022303 Dcstamp 4833414I07Rik|DC-STAMP|FIND|Tm7sf4|mDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-6 chr12 59066403 59066742 + 0.417187467413082 NA promoter-TSS (NM_008891) promoter-TSS (NM_008891) -347 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-8 chr4 154236737 154237031 + 0.417187467413082 NA intron (NM_001162977, intron 4 of 36) intron (NM_001162977, intron 4 of 36) 63011 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-12 chr2 72303797 72304060 + 0.417187467413082 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 18227 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-9 chr9 3335653 3335897 + 0.417187467413082 NA intron (NM_026303, intron 1 of 11) intron (NM_026303, intron 1 of 11) 544 NM_026303 67667 Mm.116968 NM_026303 ENSMUSG00000025899 Alkbh8 4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8 alkB homolog 8, tRNA methyltransferase protein-coding unique_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-5 chr7 99403102 99403341 + 0.417187467413082 NA intron (NM_201352, intron 2 of 17) intron (NM_201352, intron 2 of 17) 21703 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-12 chr5 123748130 123748497 + 0.417187467413082 NA intron (NR_153360, intron 1 of 11) intron (NR_153360, intron 1 of 11) 1101 NM_001005525 208606 Mm.276341 NM_025438 ENSMUSG00000029422 Rsrc2 1500011J06Rik arginine/serine-rich coiled-coil 2 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-23 chr6 143616126 143616383 + 0.417187467413082 NA intron (NR_045732, intron 2 of 4) intron (NR_045732, intron 2 of 4) 35034 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-16 chr8 128271887 128272183 + 0.417187467413082 NA Intergenic Intergenic 6190 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-9 chr5 92435386 92435632 + 0.417187467413082 NA promoter-TSS (NM_183392) promoter-TSS (NM_183392) -310 NM_183392 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding unique_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-5 chr5 125107713 125107947 + 0.417187467413082 NA intron (NM_011424, intron 5 of 46) intron (NM_011424, intron 5 of 46) 71384 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-17 chr4 107889423 107889652 + 0.417187467413082 NA promoter-TSS (NM_001347160) promoter-TSS (NM_001347160) -289 NM_001347160 74098 Mm.274853 NM_028754 ENSMUSG00000028608 0610037L13Rik 1110008H16Rik RIKEN cDNA 0610037L13 gene protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-19 chr6 72511518 72511726 + 0.417187467413082 NA Intergenic Intergenic -32769 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-4 chr3 9145958 9146259 + 0.417187467413082 NA Intergenic Intergenic 84144 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-7 chr13 63643530 63643959 + 0.417187467413082 NA Intergenic Intergenic -70284 NM_001328514 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-15 chr8 78738388 78738681 + 0.417187467413082 NA Intergenic Intergenic 82618 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-18 chr8 13624434 13624707 + 0.417187467413082 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 53017 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-5 chr10 43751047 43751320 + 0.417187467413082 NA intron (NR_040581, intron 1 of 3) intron (NR_040581, intron 1 of 3) 5025 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082 chr10 80386749 80387032 + 0.417187467413082 NA exon (NM_198615, exon 1 of 2) exon (NM_198615, exon 1 of 2) 761 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-10 chr19 47068816 47069019 + 0.417187467413082 NA intron (NM_177342, intron 1 of 10) intron (NM_177342, intron 1 of 10) 1169 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-17 chr5 93094950 93095187 + 0.417187467413082 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 1652 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-6 chr16 57282019 57282301 + 0.417187467413082 NA intron (NM_027651, intron 2 of 7) intron (NM_027651, intron 2 of 7) 10691 NM_027651 71027 Mm.158563 NM_027651 ENSMUSG00000022753 Tmem30c 4933401B01Rik|4933409A18Rik|Cdc50c transmembrane protein 30C protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-2 chr10 75037337 75037636 + 0.417187467413082 NA 5' UTR (NM_001359272, exon 1 of 10) 5' UTR (NM_001359272, exon 1 of 10) 260 NM_001359272 76877 Mm.133593 NM_029781 ENSMUSG00000020175 Rab36 6330593L16Rik|AW047545 RAB36, member RAS oncogene family protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-20 chr8 54077592 54077885 + 0.417187467413082 NA 5' UTR (NM_009506, exon 1 of 7) 5' UTR (NM_009506, exon 1 of 7) 206 NM_009506 22341 Mm.1402 NM_009506 ENSMUSG00000031520 Vegfc AW228853|VEGF-C vascular endothelial growth factor C protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-10 chr3 28723396 28723763 + 0.417187467413082 NA intron (NM_031197, intron 8 of 10) intron (NM_031197, intron 8 of 10) 25676 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-8 chr16 25532618 25532980 + 0.417187467413082 NA Intergenic Intergenic -150966 NM_001127259 22061 Mm.20894 NM_011641 ENSMUSG00000022510 Trp63 AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1 transformation related protein 63 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-8 chr12 81780431 81780838 + 0.417187467413082 NA exon (NM_177395, exon 1 of 8) exon (NM_177395, exon 1 of 8) 536 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-5 chr14 30950962 30951186 + 0.417187467413082 NA promoter-TSS (NM_011849) promoter-TSS (NM_011849) -303 NM_001308328 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-24 chr7 15947971 15948349 + 0.417187467413082 NA TTS (NM_153068) TTS (NM_153068) -2052 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Nop53 5330430H08Rik|9430097C02Rik|AU041936|AW536441|Gltscr2|PICT-1|R74911 NOP53 ribosome biogenesis factor protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-12 chr6 120916267 120916514 + 0.417187467413082 NA intron (NM_007544, intron 1 of 5) CpG 434 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-2 chr2 32683022 32683346 + 0.417187467413082 NA TTS (NM_007932) TTS (NM_007932) 4582 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-18 chr5 113151178 113151597 + 0.417187467413082 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 11926 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082 chr11 98939881 98940159 + 0.417187467413082 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 309 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-9 chr19 6135154 6135456 + 0.417187467413082 NA intron (NM_019722, intron 4 of 4) MIR|SINE|MIR 5832 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-7 chr4 126300574 126300940 + 0.417187467413082 NA intron (NM_199473, intron 2 of 3) intron (NM_199473, intron 2 of 3) 13963 NM_199473 329941 Mm.296327 NM_199473 ENSMUSG00000056174 Col8a2 AI429819 collagen, type VIII, alpha 2 protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-4 chr15 59679231 59679487 + 0.417187467413082 NA Intergenic MIR|SINE|MIR 30705 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-11 chr4 139203678 139203942 + 0.417187467413082 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 9699 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-8 chr8 22565704 22565923 + 0.417187467413082 NA intron (NM_011394, intron 10 of 10) intron (NM_011394, intron 10 of 10) 28000 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-8 chr19 36117057 36117436 + 0.417187467413082 NA intron (NM_013468, intron 4 of 8) intron (NM_013468, intron 4 of 8) 2598 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-4 chr11 62604279 62604731 + 0.417187467413082 NA promoter-TSS (NR_028541) promoter-TSS (NR_028541) -25 NR_028541 100217444 NR_028541 Snord65 MBII-135|snoRNA135 small nucleolar RNA, C/D box 65 snoRNA unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-15 chr5 91725631 91725895 + 0.417187467413082 NA Intergenic Intergenic 41537 NR_045383 73452 Mm.396233 NR_045383 ENSMUSG00000101978 1700063O14Rik - RIKEN cDNA 1700063O14 gene ncRNA unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-11 chr3 121373840 121374178 + 0.417187467413082 NA Intergenic Intergenic -52532 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-4 chr17 87838781 87839000 + 0.417187467413082 NA Intergenic Intergenic -40896 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-7 chr12 21316482 21316819 + 0.417187467413082 NA intron (NM_026347, intron 1 of 5) CpG 258 NM_026347 67732 Mm.335830 NM_026347 ENSMUSG00000062054 Iah1 1500019E20Rik|4833421E05Rik isoamyl acetate-hydrolyzing esterase 1 homolog protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-19 chr7 74629088 74629417 + 0.417187467413082 NA Intergenic Intergenic -74472 NM_001038643 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-8 chr15 84939494 84939891 + 0.417187467413082 NA exon (NM_016714, exon 8 of 8) exon (NM_016714, exon 8 of 8) 11931 NR_037206 100526461 NR_037206 ENSMUSG00000080441 Mir1249 mir-1249|mmu-mir-1249 microRNA 1249 ncRNA unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082 chr1 189716663 189717050 + 0.417187467413082 NA Intergenic Intergenic -11412 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-6 chr3 123268138 123268341 + 0.417187467413082 NA intron (NM_027135, intron 1 of 22) intron (NM_027135, intron 1 of 22) 743 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-3 chr2 90475191 90475538 + 0.417187467413082 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 3810 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-3 chr11 102888400 102888652 + 0.417187467413082 NA 3' UTR (NM_010277, exon 9 of 9) 3' UTR (NM_010277, exon 9 of 9) 3357 NM_025766 66784 Mm.483216 NM_025766 ENSMUSG00000075510 Fam187a 4933439F11Rik family with sequence similarity 187, member A protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-16 chr5 101162799 101163098 + 0.417187467413082 NA Intergenic Intergenic 316719 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-20 chr7 90092054 90092279 + 0.417187467413082 NA Intergenic Intergenic 37308 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-25 chr8 25495001 25495305 + 0.417187467413082 NA Intergenic Intergenic -23606 NM_001079909 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-9 chr5 136477859 136478130 + 0.417187467413082 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 87987 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-3 chr10 94020646 94021020 + 0.417187467413082 NA intron (NM_001304720, intron 1 of 11) intron (NM_001304720, intron 1 of 11) 14909 NM_001304720 215008 Mm.124177 NM_172538 ENSMUSG00000036099 Vezt A630071D13Rik|AI848282 vezatin, adherens junctions transmembrane protein protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-11 chr6 86195184 86195425 + 0.417187467413082 NA promoter-TSS (NM_031199) promoter-TSS (NM_031199) 77 NM_031199 21802 Mm.137222 NM_031199 ENSMUSG00000029999 Tgfa wa-1|wa1 transforming growth factor alpha protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-5 chr12 17374119 17374430 + 0.417187467413082 NA intron (NM_001008421, intron 12 of 20) intron (NM_001008421, intron 12 of 20) 18882 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-11 chr17 46269384 46269697 + 0.417187467413082 NA intron (NM_001252475, intron 1 of 8) intron (NM_001252475, intron 1 of 8) 13486 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-26 chr9 56546177 56546660 + 0.417187467413082 NA Intergenic Intergenic 89230 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-2 chr11 31562050 31562372 + 0.417187467413082 NA Intergenic Intergenic 109651 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082 chr10 82991030 82991339 + 0.417187467413082 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 5687 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-2 chr15 103358300 103358490 + 0.417187467413082 NA intron (NM_001314041, intron 3 of 30) intron (NM_001314041, intron 3 of 30) -7870 NR_105928 102466775 NR_105928 ENSMUSG00000098419 Mir6963 Gm27724|mmu-mir-6963 microRNA 6963 ncRNA unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-7 chr18 82911436 82911764 + 0.417187467413082 NA intron (NM_183033, intron 1 of 5) intron (NM_183033, intron 1 of 5) 721 NM_183033 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding unique_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082 chr10 128368280 128368594 + 0.417187467413082 NA intron (NM_001081040, intron 1 of 4) intron (NM_001081040, intron 1 of 4) 1600 NM_001081040 210582 Mm.296876 NM_001081040 ENSMUSG00000039914 Coq10a Gm1 coenzyme Q10A protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-12 chrX 101221734 101222140 + 0.417187467413082 NA intron (NM_001110310, intron 1 of 3) intron (NM_001110310, intron 1 of 3) 626 NM_001110311 55988 Mm.206949 NM_018875 ENSMUSG00000046032 Snx12 2610001F05Rik|AW045757|SDP8 sorting nexin 12 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-9 chr2 30918481 30918817 + 0.417187467413082 NA Intergenic Intergenic -15352 NM_022415 64292 Mm.28768 NM_022415 ENSMUSG00000050737 Ptges 2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1 prostaglandin E synthase protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082 chr1 180777941 180778175 + 0.417187467413082 NA Intergenic CpG 35547 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding unique_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-2 chr18 64438579 64438818 + 0.417187467413082 NA Intergenic Intergenic 50400 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-7 chr3 145876378 145876740 + 0.417187467413082 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -47703 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-3 chr1 191223866 191224242 + 0.417187467413082 NA promoter-TSS (NR_151547) promoter-TSS (NR_151547) -400 NR_151547 100504360 Mm.16927 NM_001033188 D730003I15Rik AU020850 RIKEN cDNA D730003I15 gene ncRNA common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-17 chr5 151188669 151188915 + 0.417187467413082 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 1401 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-3 chr11 83854991 83855221 + 0.417187467413082 NA intron (NM_001291269, intron 1 of 8) intron (NM_001291269, intron 1 of 8) 2146 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-6 chr14 101804671 101804884 + 0.417187467413082 NA intron (NM_201529, intron 2 of 30) intron (NM_201529, intron 2 of 30) -35846 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-16 chr4 43493477 43493679 + 0.417187467413082 NA promoter-TSS (NR_001460) promoter-TSS (NR_001460) 213 NM_001037913 622404 Mm.289109 NM_001037913 ENSMUSG00000028461 Ccdc107 - coiled-coil domain containing 107 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-13 chr5 139014428 139014762 + 0.417187467413082 NA Intergenic Intergenic -19642 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-11 chr2 29632839 29633100 + 0.417187467413082 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 13249 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-6 chr14 7852946 7853350 + 0.417187467413082 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 35191 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082 chr11 51615364 51615580 + 0.417187467413082 NA Intergenic Intergenic -4301 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-15 chr5 25529204 25529465 + 0.417187467413082 NA promoter-TSS (NR_027388) promoter-TSS (NR_027388) -684 NR_027388 73571 Mm.105263 NR_027388 ENSMUSG00000101856 1700096K18Rik - RIKEN cDNA 1700096K18 gene ncRNA unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-8 chr4 137484237 137484536 + 0.417187467413082 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 15583 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-19 chr8 22398728 22399126 + 0.417187467413082 NA promoter-TSS (NM_181325) promoter-TSS (NM_181325) 206 NR_045473 69108 Mm.46108 NR_045473 ENSMUSG00000099825 1810012K16Rik - RIKEN cDNA 1810012K16 gene ncRNA unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-19 chr5 136473341 136473590 + 0.417187467413082 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 92516 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-8 chr3 14534148 14534373 + 0.417187467413082 NA intron (NM_001163580, intron 1 of 18) intron (NM_001163580, intron 1 of 18) 472 NM_001163580 71710 Mm.257449 NM_028915 ENSMUSG00000027550 Lrrcc1 1200008A14Rik|4932441F23Rik|AI195358|AI447421 leucine rich repeat and coiled-coil domain containing 1 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-2 chr10 128821970 128822172 + 0.417187467413082 NA promoter-TSS (NM_001359169) promoter-TSS (NM_001359169) 307 NR_153109 66118 Mm.235562 NM_025364 ENSMUSG00000078427 Sarnp 1110005A23Rik|Cip29 SAP domain containing ribonucleoprotein protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-3 chr13 76098811 76099050 + 0.417187467413082 NA promoter-TSS (NM_029847) promoter-TSS (NM_029847) 196 NM_001081352 218343 Mm.277964 NM_001081352 ENSMUSG00000033991 Ttc37 - tetratricopeptide repeat domain 37 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-15 chr5 123141296 123141527 + 0.417187467413082 NA promoter-TSS (NM_001040398) promoter-TSS (NM_001040398) -782 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-6 chr18 61494817 61495171 + 0.417187467413082 NA exon (NM_177828, exon 13 of 13) exon (NM_177828, exon 13 of 13) -10387 NR_045419 442846 Mm.417648 NR_045419 A530050N04Rik - RIKEN cDNA A530050N04 gene ncRNA common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-2 chr1 85895613 85895910 + 0.417187467413082 NA intron (NM_022417, intron 1 of 5) intron (NM_022417, intron 1 of 5) 1251 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-11 chr9 57073016 57073444 + 0.417187467413082 NA intron (NM_001110351, intron 1 of 21) CpG 1190 NM_001110351 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-14 chr7 35586424 35586677 + 0.417187467413082 NA promoter-TSS (NM_145840) promoter-TSS (NM_145840) 303 NR_152519 245886 Mm.272620 NM_145633 ENSMUSG00000034867 Ankrd27 AA408090|BC016493|D330003H11Rik|Varp ankyrin repeat domain 27 (VPS9 domain) protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082 chr1 193516007 193516389 + 0.417187467413082 NA Intergenic Intergenic -8668 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-5 chr13 76017289 76017757 + 0.417187467413082 NA 5' UTR (NM_178916, exon 1 of 4) 5' UTR (NM_178916, exon 1 of 4) 1039 NM_178916 218341 Mm.266515 NM_178916 ENSMUSG00000043190 Rfesd AI256775|D030068K09 Rieske (Fe-S) domain containing protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-2 chr12 79610911 79611156 + 0.417187467413082 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 313682 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-5 chr11 104440585 104440833 + 0.417187467413082 NA intron (NM_001359634, intron 2 of 14) intron (NM_001359634, intron 2 of 14) 1582 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-21 chr8 61591408 61591704 + 0.417187467413082 NA promoter-TSS (NM_001293774) promoter-TSS (NM_001293774) -387 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-13 chr4 121215308 121215521 + 0.417187467413082 NA promoter-TSS (NM_001346660) promoter-TSS (NM_001346660) -330 NM_001346660 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-3 chr17 56290665 56291016 + 0.417187467413082 NA promoter-TSS (NM_025836) promoter-TSS (NM_025836) -329 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-10 chr9 25246555 25247040 + 0.417187467413082 NA Intergenic Intergenic -5194 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-10 chr15 97256959 97257329 + 0.417187467413082 NA intron (NM_172293, intron 1 of 5) intron (NM_172293, intron 1 of 5) -9857 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-6 chr2 152884011 152884312 + 0.417187467413082 NA intron (NM_001141975, intron 10 of 17) intron (NM_001141975, intron 10 of 17) 19094 NR_049195 100885834 NR_049195 ENSMUSG00000093746 Mir5622 Gm24421|mmu-mir-5622 microRNA 5622 ncRNA common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-4 chr11 99580764 99580967 + 0.417187467413082 NA exon (NM_027157, exon 1 of 1) exon (NM_027157, exon 1 of 1) 151 NM_027157 69664 Mm.38303 NM_027157 ENSMUSG00000047253 Krtap1-5 2310043L02Rik|AI592983 keratin associated protein 1-5 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-9 chr14 76616719 76617238 + 0.417187467413082 NA Intergenic Intergenic -60089 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-12 chr2 76370555 76370978 + 0.417187467413082 NA intron (NM_153405, intron 1 of 9) intron (NM_153405, intron 1 of 9) 782 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-7 chr15 78300211 78300427 + 0.417187467413082 NA intron (NM_001287389, intron 1 of 11) intron (NM_001287389, intron 1 of 11) 5402 NM_007781 12984 Mm.1940 NM_007781 ENSMUSG00000071714 Csf2rb2 AIC2A|BetaIl3|Bil3|Csfgmrb|Il3r|Il3rb|Il3rb2 colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-4 chr11 51939586 51939813 + 0.417187467413082 NA Intergenic Intergenic -27932 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-14 chr4 136462666 136463005 + 0.417187467413082 NA Intergenic Intergenic -6926 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-10 chr6 99466739 99467150 + 0.417187467413082 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -31599 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-5 chr17 80763689 80763918 + 0.417187467413082 NA Intergenic Intergenic -35778 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-16 chr5 66495963 66496435 + 0.417187467413082 NA intron (NM_001310626, intron 2 of 15) intron (NM_001310626, intron 2 of 15) 122618 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-13 chr2 150749173 150749413 + 0.417187467413082 NA intron (NM_001355068, intron 1 of 13) CpG 212 NM_172117 12497 Mm.275524 NM_172117 ENSMUSG00000033068 Entpd6 2700026H11Rik|Cd39l2|NTPDase-6 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-7 chr15 36867545 36867841 + 0.417187467413082 NA Intergenic Intergenic -70764 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-6 chr6 90604649 90605065 + 0.417187467413082 NA promoter-TSS (NM_027868) promoter-TSS (NM_027868) -23 NM_027868 71699 Mm.272633 NM_027868 ENSMUSG00000030089 Slc41a3 1010001P06Rik|AI480742|SLC41A1-L2 solute carrier family 41, member 3 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-10 chr2 60689353 60689670 + 0.417187467413082 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -15818 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-3 chr14 63132988 63133386 + 0.417187467413082 NA intron (NM_007798, intron 1 of 9) intron (NM_007798, intron 1 of 9) 10725 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-18 chr6 128133995 128134316 + 0.417187467413082 NA intron (NM_175414, intron 1 of 8) intron (NM_175414, intron 1 of 8) 9423 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-21 chr6 54021218 54021451 + 0.417187467413082 NA Intergenic Intergenic -18598 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-10 chr9 104321794 104322133 + 0.417187467413082 NA intron (NM_207668, intron 4 of 10) intron (NM_207668, intron 4 of 10) 15759 NM_019807 56318 Mm.19941 NM_019807 ENSMUSG00000032561 Acpp 5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal acid phosphatase, prostate protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-5 chr3 66293646 66293940 + 0.417187467413082 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 3044 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082 chr1 74249733 74250055 + 0.417187467413082 NA intron (NM_001357387, intron 4 of 10) RSINE1|SINE|B4 13377 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-13 chr4 63403744 63404026 + 0.417187467413082 NA promoter-TSS (NM_001045514) promoter-TSS (NM_001045514) -440 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding unique_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-4 chr4 119095252 119095476 + 0.417187467413082 NA Intergenic Intergenic -13381 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-16 chr7 139268698 139269076 + 0.417187467413082 NA Intergenic Intergenic 20405 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-22 chr8 90868779 90868971 + 0.417187467413082 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 40040 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-18 chr4 137077598 137077888 + 0.417187467413082 NA Intergenic Intergenic -29048 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding unique_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082 chr12 52828876 52829183 + 0.417187467413082 NA intron (NM_198111, intron 2 of 13) intron (NM_198111, intron 2 of 13) 129646 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding unique_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-2 chr11 8653701 8653971 + 0.417187467413082 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 10699 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-4 chr12 21543200 21543559 + 0.417187467413082 NA Intergenic CpG -125943 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-13 chr4 134152715 134152956 + 0.417187467413082 NA intron (NM_144527, intron 6 of 13) intron (NM_144527, intron 6 of 13) -24082 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-5 chr18 61085343 61085658 + 0.417187467413082 NA TTS (NM_001146268) TTS (NM_001146268) -20072 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding unique_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-6 chr7 101474884 101475271 + 0.417187467413082 NA promoter-TSS (NR_029791) promoter-TSS (NR_029791) -299 NR_029791 387157 NR_029791 ENSMUSG00000065446 Mir139 Mirn139|mir-139|mmu-mir-139 microRNA 139 ncRNA common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-17 chr9 103072616 103072861 + 0.417187467413082 NA intron (NM_033314, intron 7 of 13) intron (NM_033314, intron 7 of 13) -39336 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-11 chr4 41756446 41756747 + 0.417187467413082 NA promoter-TSS (NR_155499) promoter-TSS (NR_155499) 386 NM_001302511 14430 Mm.439669 NM_016658 ENSMUSG00000036073 Galt AW553376 galactose-1-phosphate uridyl transferase protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-14 chr2 167877205 167877458 + 0.417187467413082 NA Intergenic Intergenic -54996 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-16 chr5 123981149 123981357 + 0.417187467413082 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 7625 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-9 chr19 40436025 40436383 + 0.417187467413082 NA intron (NM_001034962, intron 1 of 22) intron (NM_001034962, intron 1 of 22) 15194 NM_001034962 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-7 chr8 91135627 91135934 + 0.417187467413082 NA promoter-TSS (NM_010241) promoter-TSS (NM_010241) -286 NM_010241 14339 Mm.324588 NM_010241 ENSMUSG00000031667 Aktip AL023020|Fif|Ft|Ft1|Fts thymoma viral proto-oncogene 1 interacting protein protein-coding unique_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-3 chr18 80169749 80170021 + 0.417187467413082 NA Intergenic Intergenic -16354 NR_131039 105246506 Mm.392326 NR_131039 LOC105246506 - uncharacterized LOC105246506 ncRNA unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082 chr1 135841415 135841664 + 0.417187467413082 NA intron (NM_001130176, intron 1 of 12) intron (NM_001130176, intron 1 of 12) 678 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-14 chr4 147896913 147897161 + 0.417187467413082 NA intron (NM_001355590, intron 3 of 18) intron (NM_001355590, intron 3 of 18) 7624 NM_001355590 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-14 chr7 73555884 73556165 + 0.417187467413082 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 2371 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-15 chr3 51564248 51564543 + 0.417187467413082 NA intron (NR_033624, intron 3 of 4) intron (NR_033624, intron 3 of 4) -3572 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-2 chr1 172026768 172027091 + 0.417187467413082 NA intron (NM_033509, intron 1 of 7) T-rich|Low_complexity|Low_complexity 366 NM_033509 93840 Mm.36148 NM_033509 ENSMUSG00000026556 Vangl2 C530001F03Rik|Lootl|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska|stbm|strabismus VANGL planar cell polarity 2 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-4 chr10 41302815 41303121 + 0.417187467413082 NA intron (NM_133999, intron 1 of 22) CpG 273 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-22 chr6 55433333 55433806 + 0.417187467413082 NA Intergenic Intergenic -18409 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding unique_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-3 chr15 73431934 73432368 + 0.417187467413082 NA Intergenic Intergenic -8960 NM_001358045 14083 Mm.254494 NM_007982 ENSMUSG00000022607 Ptk2 FADK 1|FAK|FRNK|Fadk|p125FAK PTK2 protein tyrosine kinase 2 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-14 chr5 34534038 34534343 + 0.417187467413082 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 8406 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-23 chrX 73565935 73566370 + 0.417187467413082 NA intron (NM_177236, intron 20 of 20) intron (NM_177236, intron 20 of 20) 63066 NM_177236 320707 Mm.210095 NM_177236 ENSMUSG00000031376 Atp2b3 6430519O13Rik|Pmca3 ATPase, Ca++ transporting, plasma membrane 3 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-7 chr2 126361821 126362080 + 0.417187467413082 NA intron (NM_001359975, intron 20 of 27) intron (NM_001359975, intron 20 of 27) 129603 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-2 chr11 44015190 44015453 + 0.417187467413082 NA Intergenic Intergenic -114084 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-4 chr4 89373400 89373687 + 0.417187467413082 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -62511 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-27 chrX 164976369 164976715 + 0.417187467413082 NA intron (NM_029730, intron 2 of 14) ID_B1|SINE|B4 3833 NM_001290523 76763 Mm.291758 NM_029730 ENSMUSG00000061778 Mospd2 2410013I23Rik motile sperm domain containing 2 protein-coding unique_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-4 chr3 98387372 98387815 + 0.417187467413082 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 5112 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082 chr1 87852702 87852992 + 0.417187467413082 NA promoter-TSS (NM_177646) promoter-TSS (NM_177646) -440 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-12 chr3 132869007 132869343 + 0.417187467413082 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 9421 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-20 chr6 31217120 31217473 + 0.417187467413082 NA intron (NR_110469, intron 1 of 3) intron (NR_110469, intron 1 of 3) 1178 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-15 chr7 109615575 109615848 + 0.417187467413082 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 857 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-7 chr4 107179744 107180081 + 0.417187467413082 NA intron (NM_029565, intron 1 of 7) intron (NM_029565, intron 1 of 7) 1282 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-10 chr17 78326409 78326751 + 0.417187467413082 NA intron (NM_015800, intron 7 of 16) intron (NM_015800, intron 7 of 16) 91572 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-9 chr17 46275222 46275588 + 0.417187467413082 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 7621 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-6 chr11 115277447 115277736 + 0.417187467413082 NA promoter-TSS (NM_007997) promoter-TSS (NM_007997) -622 NM_007997 14149 Mm.4719 NM_007997 ENSMUSG00000018861 Fdxr AR ferredoxin reductase protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-10 chr4 41755867 41756099 + 0.417187467413082 NA promoter-TSS (NM_001302511) promoter-TSS (NM_001302511) -211 NR_155499 105247116 Mm.488220 NR_155499 Gm42274 - predicted gene, 42274 ncRNA unique_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-12 chr4 102511218 102511506 + 0.417187467413082 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -58698 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak2_20_13_0.31223475353502_3.96347229882511_0.417187467413082-21 chr9 98277494 98277770 + 0.417187467413082 NA Intergenic Intergenic -18938 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak2_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-5 chr2 60627751 60627996 + 0.417187467413082 NA exon (NM_001159564, exon 13 of 18) exon (NM_001159564, exon 13 of 18) 45820 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_15_17_-0.439884957224516_3.94998252283005_0.417187467413082-6 chr7 112697938 112698224 + 0.417187467413082 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 18761 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-9 chr4 15265850 15266064 + 0.417187467413082 NA exon (NM_181401, exon 1 of 3) exon (NM_181401, exon 1 of 3) 137 NM_181401 100201 Mm.394111 NM_181401 ENSMUSG00000043252 Tmem64 9630015D15Rik|AI790744|AV300874 transmembrane protein 64 protein-coding common_peak1_19_13_0.24234202091407_3.92852593251464_0.417187467413082-3 chr2 120126323 120126575 + 0.417187467413082 NA intron (NM_133838, intron 3 of 5) intron (NM_133838, intron 3 of 5) 28126 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak1_20_13_0.31223475353502_3.96347229882511_0.417187467413082-4 chr17 70753410 70753618 + 0.417187467413082 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 93263 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_19_13_0.24234202091407_3.92852593251464_0.417187467413082-13 chr7 37320388 37320607 + 0.417187467413082 NA Intergenic Intergenic 449255 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak2_77_56_0.166428782944583_5.91610440563703_0.416927796942778 chr11 59349504 59350435 + 0.416927796942778 NA Intergenic Intergenic 25684 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_77_56_0.166428782944583_5.91610440563703_0.416927796942778-2 chr2 53191396 53192005 + 0.416927796942778 NA promoter-TSS (NM_022989) promoter-TSS (NM_022989) -384 NM_022989 65103 Mm.37623 NM_022989 ENSMUSG00000026960 Arl6ip6 2310057C01Rik|2610529A11Rik|Aip-6 ADP-ribosylation factor-like 6 interacting protein 6 protein-coding common_peak2_67_64_-0.219591935265247_5.91257184539583_0.416927796942778 chr13 37857235 37858226 + 0.416927796942778 NA intron (NM_001039188, intron 1 of 9) CpG 30337 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_77_56_0.166428782944583_5.91610440563703_0.416927796942778 chr11 102184447 102185196 + 0.416927796942778 NA intron (NM_172947, intron 1 of 4) intron (NM_172947, intron 1 of 4) 435 NM_172947 268490 Mm.259079 NM_172947 ENSMUSG00000020922 Lsm12 1110032E16Rik|1110059P07|2600001B17Rik LSM12 homolog protein-coding common_peak2_77_56_0.166428782944583_5.91610440563703_0.416927796942778-2 chr3 84478556 84479534 + 0.416927796942778 NA intron (NM_001033301, intron 1 of 11) intron (NM_001033301, intron 1 of 11) 446 NM_001205355 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding common_peak2_67_64_-0.219591935265247_5.91257184539583_0.416927796942778-2 chr4 3834910 3835629 + 0.416927796942778 NA exon (NM_026147, exon 2 of 4) exon (NM_026147, exon 2 of 4) 386 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_185_165_-0.130809269139933_7.30963479677696_0.416828661018833 chr15 68257798 68259877 + 0.416828661018833 NA promoter-TSS (NM_001145888) promoter-TSS (NM_001145888) 19 NR_152182 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding common_peak2_202_152_0.1121292486855_7.3134524670354_0.416828661018783 chr8 126590982 126592048 + 0.416828661018783 NA exon (NM_001164598, exon 2 of 2) exon (NM_001164598, exon 2 of 2) 1921 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-6 chr16 91688962 91689312 + 0.416752705545949 NA promoter-TSS (NM_021720) promoter-TSS (NM_021720) 239 NR_040389 100038392 Mm.440384 NR_040389 ENSMUSG00000085169 Gm10785 - predicted gene 10785 ncRNA unique_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-2 chr9 106476455 106476912 + 0.416752705545949 NA promoter-TSS (NM_145620) promoter-TSS (NM_145620) 266 NM_001311150 235587 Mm.273659 NM_145619 ENSMUSG00000023249 Parp3 A930002C11Rik|AW990611|Adprt3|Adprtl3|PARP-3|pADPRT-3 poly (ADP-ribose) polymerase family, member 3 protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-4 chr11 118403758 118404179 + 0.416752705545949 NA Intergenic Intergenic -2009 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-2 chr1 87840759 87841074 + 0.416752705545949 NA intron (NM_009118, intron 14 of 15) intron (NM_009118, intron 14 of 15) -12371 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-2 chr2 167569257 167569836 + 0.416752705545949 NA Intergenic Intergenic 31351 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-3 chr2 117542169 117542414 + 0.416752705545949 NA Intergenic Intergenic -199414 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-5 chr15 85664280 85664629 + 0.416752705545949 NA Intergenic Intergenic -39319 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-13 chr6 82751969 82752487 + 0.416752705545949 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 22226 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-2 chr11 69795627 69795875 + 0.416752705545949 NA TTS (NM_001291104) TTS (NM_001291104) 186 NM_009601 11443 Mm.86425 NM_009601 ENSMUSG00000041189 Chrnb1 Achr-2|Acrb cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) protein-coding common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-6 chr6 70874813 70875492 + 0.416752705545949 NA intron (NM_010121, intron 2 of 16) intron (NM_010121, intron 2 of 16) 30637 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949 chr1 182021394 182021725 + 0.416752705545949 NA Intergenic Intergenic -1579 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-16 chrX 167208492 167209114 + 0.416752705545949 NA intron (NM_021278, intron 1 of 2) intron (NM_021278, intron 1 of 2) 415 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4|Tbeta4 thymosin, beta 4, X chromosome protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-11 chr5 120613164 120613383 + 0.416752705545949 NA promoter-TSS (NM_029096) promoter-TSS (NM_029096) 143 NM_028041 71990 Mm.24495 NM_028041 ENSMUSG00000029599 Ddx54 2410015A15Rik|AI414901|DP97 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 protein-coding common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-5 chr2 168080375 168080632 + 0.416752705545949 NA promoter-TSS (NM_021409) promoter-TSS (NM_021409) -501 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-11 chr8 4166602 4166909 + 0.416752705545949 NA 5' UTR (NM_001039578, exon 1 of 11) 5' UTR (NM_001039578, exon 1 of 11) 188 NM_001346730 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-8 chr19 46623484 46623910 + 0.416752705545949 NA intron (NM_001177813, intron 1 of 3) intron (NM_001177813, intron 1 of 3) 296 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-13 chr7 28931775 28932217 + 0.416752705545949 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 30336 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-5 chr9 99140393 99140903 + 0.416752705545949 NA promoter-TSS (NM_029094) promoter-TSS (NM_029094) -437 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-4 chrX 151344244 151344819 + 0.416752705545949 NA exon (NM_198105, exon 1 of 16) exon (NM_198105, exon 1 of 16) 308 NM_198105 207375 Mm.391339 NM_198105 ENSMUSG00000025262 Fam120c D930001I21Rik|ORF34 family with sequence similarity 120, member C protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-10 chr4 132066023 132066377 + 0.416752705545949 NA intron (NM_183428, intron 1 of 20) intron (NM_183428, intron 1 of 20) 5897 NM_183428 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-2 chr13 52657628 52658270 + 0.416752705545949 NA Intergenic Intergenic 61067 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-4 chr11 88252541 88253149 + 0.416752705545949 NA Intergenic Intergenic -41198 NM_028859 74297 Mm.207320 NM_028859 ENSMUSG00000034031 Ccdc182 1700106J16Rik coiled-coil domain containing 182 protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-5 chr15 102970603 102970926 + 0.416752705545949 NA intron (NM_010462, intron 1 of 1) intron (NM_010462, intron 1 of 1) -2586 NR_029722 723958 NR_029722 ENSMUSG00000065488 Mir196a-2 Mirn196a-2|mir-196a-2 microRNA 196a-2 ncRNA common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-6 chr3 41288257 41288785 + 0.416752705545949 NA Intergenic Intergenic 204678 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-4 chr13 97243090 97243632 + 0.416752705545949 NA intron (NM_007930, intron 1 of 2) intron (NM_007930, intron 1 of 2) 2256 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding unique_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-3 chr15 89128651 89129035 + 0.416752705545949 NA promoter-TSS (NR_028449) promoter-TSS (NR_028449) -143 NR_028449 170787 Mm.203954 NM_199198 ENSMUSG00000062906 Hdac10 AW548891|Hd10 histone deacetylase 10 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-14 chr8 60859154 60859618 + 0.416752705545949 NA Intergenic Intergenic -31007 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-4 chr15 62333130 62333530 + 0.416752705545949 NA Intergenic Intergenic -113879 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-5 chr15 53170622 53170998 + 0.416752705545949 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 175373 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-13 chr9 50753257 50753577 + 0.416752705545949 NA exon (NM_001289784, exon 2 of 4) exon (NM_001289784, exon 2 of 4) 446 NM_009964 12955 Mm.178 NM_009964 ENSMUSG00000032060 Cryab Crya-2|Crya2|HspB5|P23 crystallin, alpha B protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-2 chr15 84277476 84278075 + 0.416752705545949 NA intron (NM_133167, intron 3 of 12) intron (NM_133167, intron 3 of 12) 45732 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-8 chr17 7945646 7945844 + 0.416752705545949 NA 5' UTR (NM_025789, exon 1 of 8) 5' UTR (NM_025789, exon 1 of 8) 131 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-4 chr15 60833863 60834187 + 0.416752705545949 NA Intergenic Intergenic -8945 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-7 chr17 80801514 80801844 + 0.416752705545949 NA Intergenic Intergenic -73654 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949 chr11 103260796 103261310 + 0.416752705545949 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 6348 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-3 chr10 128822017 128822589 + 0.416752705545949 NA promoter-TSS (NM_001359169) promoter-TSS (NM_001359169) 539 NR_153109 66118 Mm.235562 NM_025364 ENSMUSG00000078427 Sarnp 1110005A23Rik|Cip29 SAP domain containing ribonucleoprotein protein-coding unique_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-4 chr3 121888683 121889210 + 0.416752705545949 NA Intergenic Intergenic -64283 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-12 chr8 54530275 54530534 + 0.416752705545949 NA promoter-TSS (NM_029701) promoter-TSS (NM_029701) -406 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-5 chr2 164431053 164431480 + 0.416752705545949 NA exon (NM_011521, exon 2 of 5) exon (NM_011521, exon 2 of 5) 11922 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-8 chr4 56305409 56305794 + 0.416752705545949 NA Intergenic Intergenic 435824 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-11 chr5 76905135 76905410 + 0.416752705545949 NA intron (NM_173765, intron 1 of 15) intron (NM_173765, intron 1 of 15) 242 NM_173765 231326 Mm.39271 NM_173765 ENSMUSG00000055923 Aasdh A230062G08Rik|A830035E16|Acsf4|U26 aminoadipate-semialdehyde dehydrogenase protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-10 chr2 151978451 151978882 + 0.416752705545949 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 1553 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949 chr10 67717020 67717417 + 0.416752705545949 NA Intergenic Intergenic -145259 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-2 chr11 83298582 83298824 + 0.416752705545949 NA intron (NM_134025, intron 1 of 3) intron (NM_134025, intron 1 of 3) 274 NM_134025 103737 Mm.102205 NM_134025 ENSMUSG00000018733 Pex12 AI451906 peroxisomal biogenesis factor 12 protein-coding common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-3 chr15 32264774 32265202 + 0.416752705545949 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 20175 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding unique_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949 chr8 23208545 23208933 + 0.416752705545949 NA promoter-TSS (NM_018743) promoter-TSS (NM_018743) -286 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949 chr14 24222886 24223462 + 0.416752705545949 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 22746 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-4 chr14 25457324 25457594 + 0.416752705545949 NA Intergenic CpG -1726 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-8 chr17 24695779 24696011 + 0.416752705545949 NA promoter-TSS (NM_001357836) promoter-TSS (NM_001357836) 261 NM_023040 11692 Mm.28124 NM_023040 ENSMUSG00000040888 Gfer Alr|ERV1 growth factor, augmenter of liver regeneration protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-4 chr15 81913192 81913680 + 0.416752705545949 NA intron (NM_080633, intron 15 of 17) intron (NM_080633, intron 15 of 17) 12777 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-12 chr6 33871406 33871880 + 0.416752705545949 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -157805 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-6 chr16 23454734 23455207 + 0.416752705545949 NA intron (NM_008555, intron 13 of 15) intron (NM_008555, intron 13 of 15) 25837 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-11 chr8 4259460 4259730 + 0.416752705545949 NA promoter-TSS (NM_183315) promoter-TSS (NM_183315) -321 NM_183315 330695 Mm.34210 NM_183315 ENSMUSG00000048644 Ctxn1 BC028881|Ctxn cortexin 1 protein-coding common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-3 chr11 8569042 8569498 + 0.416752705545949 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 95265 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-15 chr8 94702996 94703269 + 0.416752705545949 NA Intergenic Intergenic -6890 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-9 chr2 145934307 145934608 + 0.416752705545949 NA promoter-TSS (NM_175280) promoter-TSS (NM_175280) 243 NM_025820 66877 Mm.248755 NM_025820 ENSMUSG00000001767 Crnkl1 1200013P10Rik|5730590A01Rik|C80326|crn crooked neck pre-mRNA splicing factor 1 protein-coding common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-5 chr7 110221943 110222417 + 0.416752705545949 NA intron (NM_009302, intron 1 of 11) CpG 477 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-3 chr11 88560984 88561256 + 0.416752705545949 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -58131 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-3 chr12 80376317 80376874 + 0.416752705545949 NA exon (NM_177267, exon 6 of 9) exon (NM_177267, exon 6 of 9) 15082 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-7 chr17 75255427 75255952 + 0.416752705545949 NA intron (NM_019919, intron 9 of 33) ID_B1|SINE|B4 76908 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-7 chr5 3494623 3494986 + 0.416752705545949 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -49029 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-12 chr7 4792469 4792671 + 0.416752705545949 NA promoter-TSS (NM_009081) promoter-TSS (NM_009081) -395 NM_009081 19943 Mm.379002 NM_009081 ENSMUSG00000030432 Rpl28 D7Wsu21e ribosomal protein L28 protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-8 chr3 121725022 121725238 + 0.416752705545949 NA intron (NM_010171, intron 2 of 5) intron (NM_010171, intron 2 of 5) 1593 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-9 chr2 25657037 25657445 + 0.416752705545949 NA promoter-TSS (NM_007947) promoter-TSS (NM_007947) -711 NM_007947 13863 Mm.12867 NM_007947 ENSMUSG00000026937 Lcn5 E-RABP|Erabp|MEP10 lipocalin 5 protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-2 chr13 23571419 23572053 + 0.416752705545949 NA promoter-TSS (NM_178187) promoter-TSS (NM_178187) 336 NM_178196 319181 Mm.261673 NM_178196 ENSMUSG00000058385 Hist1h2bg - histone cluster 1, H2bg protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-10 chr2 118113785 118114138 + 0.416752705545949 NA intron (NM_001313914, intron 3 of 21) intron (NM_001313914, intron 3 of 21) 2085 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-5 chr13 17606056 17606589 + 0.416752705545949 NA intron (NM_138654, intron 6 of 13) intron (NM_138654, intron 6 of 13) 88443 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-14 chr9 51056276 51056707 + 0.416752705545949 NA TTS (NM_001033534) TTS (NM_001033534) 20603 NM_001033534 244864 Mm.335152 NM_001033534 ENSMUSG00000060594 Layn E030012M19Rik|Gm511 layilin protein-coding unique_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-3 chr4 155697073 155697474 + 0.416752705545949 NA TTS (NM_178699) TTS (NM_178699) 2931 NM_178699 230991 Mm.29083 NM_178699 ENSMUSG00000074738 Fndc10 B930041F14Rik|MNCb-3966 fibronectin type III domain containing 10 protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-14 chr7 82866686 82866965 + 0.416752705545949 NA promoter-TSS (NM_175366) promoter-TSS (NM_175366) -508 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949 chr10 63338538 63339203 + 0.416752705545949 NA exon (NM_019812, exon 1 of 9) exon (NM_019812, exon 1 of 9) 165 NM_019812 93759 Mm.351459 NM_019812 ENSMUSG00000020063 Sirt1 AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha sirtuin 1 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-3 chr14 47299282 47299925 + 0.416752705545949 NA intron (NM_178684, intron 1 of 3) intron (NM_178684, intron 1 of 3) 1329 NM_001360542 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-8 chr19 40493051 40493294 + 0.416752705545949 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 20564 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949 chr12 3352553 3353019 + 0.416752705545949 NA Intergenic B2_Mm2|SINE|B2 -12346 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-2 chr11 5863119 5863408 + 0.416752705545949 NA intron (NM_009636, intron 1 of 20) intron (NM_009636, intron 1 of 20) 1397 NM_001291857 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949 chr1 155040921 155041233 + 0.416752705545949 NA Intergenic Intergenic 42187 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-7 chr3 67430183 67430495 + 0.416752705545949 NA intron (NM_138591, intron 1 of 17) CpG 224 NM_138591 28030 Mm.122466 NM_138591 ENSMUSG00000027774 Gfm1 AW545374|D3Wsu133e|Gfm G elongation factor, mitochondrial 1 protein-coding common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-6 chr7 144941068 144941396 + 0.416752705545949 NA Intergenic CpG -1307 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-3 chr2 120567923 120568430 + 0.416752705545949 NA intron (NM_009222, intron 1 of 7) intron (NM_009222, intron 1 of 7) 505 NM_009222 20619 Mm.245715 NM_009222 ENSMUSG00000027287 Snap23 23kDa|AA408749|SNAP-23|Sndt|Syndet synaptosomal-associated protein 23 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-13 chr5 136471905 136472506 + 0.416752705545949 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 93776 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-7 chr16 16215328 16215827 + 0.416752705545949 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 2232 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-6 chr3 95230183 95230444 + 0.416752705545949 NA intron (NM_001038708, intron 1 of 4) intron (NM_001038708, intron 1 of 4) 1370 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-12 chr5 103737194 103737519 + 0.416752705545949 NA Intergenic Intergenic -16806 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949 chr1 86111008 86111379 + 0.416752705545949 NA intron (NM_008311, intron 1 of 3) intron (NM_008311, intron 1 of 3) 777 NM_008311 15559 Mm.439747 NM_008311 ENSMUSG00000026228 Htr2b 5-HT2B|AJ012488|AV377389 5-hydroxytryptamine (serotonin) receptor 2B protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-5 chr12 69356705 69357080 + 0.416752705545949 NA intron (NM_025441, intron 1 of 32) CpG 284 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-2 chr11 60352507 60352721 + 0.416752705545949 NA promoter-TSS (NM_029044) promoter-TSS (NM_029044) 291 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-7 chr17 80772151 80772500 + 0.416752705545949 NA Intergenic Intergenic -44300 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949 chr1 191906937 191907515 + 0.416752705545949 NA non-coding (NR_030669, exon 1 of 5) non-coding (NR_030669, exon 1 of 5) 301 NR_030669 98736 Mm.379232 NM_001024489 ENSMUSG00000055833 1700034H15Rik 4930557M11Rik|BB016121 RIKEN cDNA 1700034H15 gene ncRNA common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-7 chr9 98563173 98563500 + 0.416752705545949 NA promoter-TSS (NM_015827) promoter-TSS (NM_015827) 275 NR_029444 75881 Mm.483402 NM_175227 ENSMUSG00000051074 4930579K19Rik - RIKEN cDNA 4930579K19 gene ncRNA common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-11 chr4 59035059 59035512 + 0.416752705545949 NA exon (NM_025277, exon 1 of 3) exon (NM_025277, exon 1 of 3) 129 NM_025277 14700 Mm.41780 NM_025277 ENSMUSG00000038607 Gng10 AV006524 guanine nucleotide binding protein (G protein), gamma 10 protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-14 chr8 31518521 31518881 + 0.416752705545949 NA Intergenic Intergenic 150952 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-2 chr15 78509861 78510485 + 0.416752705545949 NA Intergenic Intergenic -15107 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-10 chr3 102660047 102660389 + 0.416752705545949 NA Intergenic Intergenic -74552 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-5 chr3 54541121 54541463 + 0.416752705545949 NA Intergenic Intergenic -151523 NR_152185 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949 chr1 45794932 45795372 + 0.416752705545949 NA promoter-TSS (NM_028599) promoter-TSS (NM_028599) -14 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-13 chr9 47703002 47703412 + 0.416752705545949 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 115001 NR_046048 100038460 Mm.447649 NR_046048 Gm10677 - predicted gene 10677 ncRNA common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-10 chr7 98390940 98391272 + 0.416752705545949 NA Intergenic Intergenic -29778 NM_001168539 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-9 chr4 82443261 82443769 + 0.416752705545949 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 62264 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949 chr12 84865223 84865901 + 0.416752705545949 NA intron (NM_013589, intron 2 of 34) intron (NM_013589, intron 2 of 34) -10240 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-9 chr2 71529855 71530291 + 0.416752705545949 NA TTS (NR_002854) TTS (NR_002854) 628 NM_010053 13390 Mm.475101 NM_010053 ENSMUSG00000041911 Dlx1 Dlx|Dlx-1 distal-less homeobox 1 protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-14 chr9 118506320 118506694 + 0.416752705545949 NA exon (NM_018748, exon 1 of 24) exon (NM_018748, exon 1 of 24) 189 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-6 chr13 98532910 98533247 + 0.416752705545949 NA Intergenic Intergenic -98013 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-6 chr17 57247304 57247608 + 0.416752705545949 NA promoter-TSS (NM_001308074) promoter-TSS (NM_001308074) 14 NM_001308074 78308 Mm.28468 NM_030084 ENSMUSG00000005823 Gpr108 1810015L19Rik|AA589464|C79132|Lustr2 G protein-coupled receptor 108 protein-coding unique_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-4 chr3 145576229 145576684 + 0.416752705545949 NA exon (NM_001081094, exon 1 of 10) exon (NM_001081094, exon 1 of 10) 240 NM_001346521 229937 Mm.24586 NM_001081094 ENSMUSG00000074182 Znhit6 2410019A14Rik zinc finger, HIT type 6 protein-coding unique_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949 chr6 72539053 72539314 + 0.416752705545949 NA Intergenic Intergenic -5208 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-15 chr9 120933523 120933716 + 0.416752705545949 NA promoter-TSS (NM_001165902) promoter-TSS (NM_001165902) 41 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949-7 chr6 125314130 125314587 + 0.416752705545949 NA promoter-TSS (NM_010736) promoter-TSS (NM_010736) -473 NM_010736 17000 Mm.3122 NM_010736 ENSMUSG00000030339 Ltbr AI256028|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3 lymphotoxin B receptor protein-coding unique_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-4 chr3 53062913 53063308 + 0.416752705545949 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 21563 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-9 chr4 45520729 45520988 + 0.416752705545949 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 9970 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak2_24_26_-0.385533660437916_4.56212067194451_0.416752705545949 chr15 25555909 25556361 + 0.416752705545949 NA Intergenic Intergenic -66415 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding unique_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-3 chr3 88176948 88177404 + 0.416752705545949 NA intron (NR_045997, intron 1 of 2) intron (NR_045997, intron 1 of 2) 609 NR_045997 76642 Mm.424420 NR_045997 ENSMUSG00000096935 1700113A16Rik 2210408E11Rik|AA408983 RIKEN cDNA 1700113A16 gene ncRNA common_peak1_25_26_-0.329349327708355_4.59021283830929_0.416752705545949 chr10 96807097 96807513 + 0.416752705545949 NA Intergenic Intergenic 190304 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_31_21_0.263553446007254_4.59120834164092_0.416752705545949-3 chr13 49299570 49299961 + 0.416752705545949 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 9443 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-6 chr17 66352843 66353296 + 0.416752705545949 NA intron (NM_172963, intron 10 of 13) intron (NM_172963, intron 10 of 13) 96681 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_31_21_0.263553446007254_4.59120834164092_0.416752705545949-4 chr2 120126328 120126834 + 0.416752705545949 NA intron (NM_133838, intron 3 of 5) intron (NM_133838, intron 3 of 5) 27994 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-9 chr2 72308931 72309301 + 0.416752705545949 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 23415 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-10 chr3 130730523 130731110 + 0.416752705545949 NA promoter-TSS (NM_026724) promoter-TSS (NM_026724) -418 NM_001005859 68436 Mm.140568 NM_026724 ENSMUSG00000062006 Rpl34 1100001I22Rik ribosomal protein L34 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-2 chr10 57486772 57487080 + 0.416752705545949 NA promoter-TSS (NR_045353) promoter-TSS (NR_045353) 541 NM_008297 15500 Mm.261395 NM_008297 ENSMUSG00000019878 Hsf2 AI661205 heat shock factor 2 protein-coding common_peak2_30_21_0.218072900488729_4.56846806888166_0.416752705545949-11 chr3 158036794 158037022 + 0.416752705545949 NA promoter-TSS (NM_001093752) promoter-TSS (NM_001093752) 226 NM_001289524 67144 Mm.358704 NM_024194 ENSMUSG00000063052 Lrrc40 2610040E16Rik|AI837674 leucine rich repeat containing 40 protein-coding unique_peak2_25_26_-0.329349327708355_4.59021283830929_0.416752705545949-2 chr18 36793989 36794293 + 0.416752705545949 NA intron (NM_025594, intron 1 of 5) intron (NM_025594, intron 1 of 5) 218 NM_025594 66492 Mm.251155 NM_025594 ENSMUSG00000001383 Zmat2 2610510D14Rik|2900082I05Rik zinc finger, matrin type 2 protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-7 chr16 45367103 45367428 + 0.416752705545949 NA Intergenic Intergenic 41788 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_30_21_0.218072900488729_4.56846806888166_0.416752705545949-12 chr5 35105263 35105631 + 0.416752705545949 NA intron (NM_013587, intron 1 of 7) CpG 250 NM_013587 16976 Mm.277661 NM_013587 ENSMUSG00000029103 Lrpap1 AA617339|AI790446|AU042172|C77774|HBP44|RAP low density lipoprotein receptor-related protein associated protein 1 protein-coding common_peak1_234_177_0.103474811943046_7.52747083693792_0.41671241851035 chr8 4324187 4325907 + 0.41671241851035 NA promoter-TSS (NM_010485) promoter-TSS (NM_010485) 53 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding common_peak2_120_89_0.13645766464665_6.560081928653_0.416588375475314 chr8 109737220 109738078 + 0.416588375475314 NA promoter-TSS (NM_001080930) promoter-TSS (NM_001080930) 90 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e ataxin 1-like protein-coding common_peak1_120_89_0.13645766464665_6.560081928653_0.416588375475314 chr15 83463520 83464569 + 0.416588375475314 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 562 NM_001358641 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_108_99_-0.165161304646278_6.56127553745159_0.416588375475289 chr3 121645472 121646834 + 0.416588375475289 NA intron (NR_036458, intron 1 of 2) (CA)n|Simple_repeat|Simple_repeat 300 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_108_99_-0.165161304646278_6.56127553745159_0.416588375475289 chr17 74528603 74529619 + 0.416588375475289 NA intron (NM_007566, intron 1 of 72) CpG 816 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak2_305_233_0.0870273830614678_7.91387841111414_0.416382500478083 chr16 92697542 92699391 + 0.416382500478083 NA intron (NM_001111022, intron 2 of 6) CpG -1137 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-7 chr7 110779907 110780496 + 0.416139936131883 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 7597 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-4 chr5 30850435 30850840 + 0.416139936131883 NA intron (NM_133350, intron 1 of 6) intron (NM_133350, intron 1 of 6) -11170 NM_001310516 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-6 chr6 57812773 57813256 + 0.416139936131883 NA intron (NM_146168, intron 1 of 4) intron (NM_146168, intron 1 of 4) 12111 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-6 chr4 62732338 62732865 + 0.416139936131883 NA Intergenic Intergenic 58627 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-3 chr16 31948673 31949219 + 0.416139936131883 NA promoter-TSS (NR_027897) promoter-TSS (NR_027897) 400 NM_026554 68092 Mm.290027 NM_026554 ENSMUSG00000022774 Ncbp2 20kDa|5930413E18Rik|AA536802|AI843301|C79367 nuclear cap binding protein subunit 2 protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883 chr10 116266376 116266859 + 0.416139936131883 NA intron (NM_001358484, intron 12 of 12) PB1D10|SINE|Alu -34757 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-7 chr4 130102063 130102521 + 0.416139936131883 NA Intergenic Intergenic -5264 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-4 chr2 180119366 180119791 + 0.416139936131883 NA intron (NM_144500, intron 1 of 13) CpG 212 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-8 chr8 110831338 110831970 + 0.416139936131883 NA intron (NM_133953, intron 10 of 25) intron (NM_133953, intron 10 of 25) 6944 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-3 chr17 13759495 13759960 + 0.416139936131883 NA promoter-TSS (NM_010806) promoter-TSS (NM_010806) -814 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883 chr12 85598816 85599190 + 0.416139936131883 NA promoter-TSS (NM_030887) promoter-TSS (NM_030887) -102 NM_001205052 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-2 chr15 63410794 63411457 + 0.416139936131883 NA Intergenic Intergenic 68483 NR_045279 432958 Mm.255105 NR_045279 ENSMUSG00000115520 Gm20740 - predicted gene, 20740 ncRNA common_peak2_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-5 chr8 70713662 70714193 + 0.416139936131883 NA Intergenic Intergenic -4616 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-6 chr5 31220197 31220531 + 0.416139936131883 NA exon (NM_008014, exon 1 of 10) exon (NM_008014, exon 1 of 10) 181 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding unique_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883 chr3 37654170 37654717 + 0.416139936131883 NA Intergenic Intergenic 14496 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-5 chr3 97966353 97966779 + 0.416139936131883 NA exon (NM_001033779, exon 2 of 2) exon (NM_001033779, exon 2 of 2) 36393 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak2_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-2 chr11 94428042 94428533 + 0.416139936131883 NA intron (NM_009783, intron 22 of 35) intron (NM_009783, intron 22 of 35) -35311 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-2 chr11 49202955 49203341 + 0.416139936131883 NA promoter-TSS (NM_009562) promoter-TSS (NM_009562) -352 NM_001024846 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak2_37_37_-0.278764058898438_5.10854548399437_0.416139936131883 chr10 127666100 127666730 + 0.416139936131883 NA promoter-TSS (NR_045171) promoter-TSS (NR_045171) 288 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-2 chr15 56841918 56842366 + 0.416139936131883 NA Intergenic Intergenic -147596 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883 chr11 4307525 4308128 + 0.416139936131883 NA Intergenic (TCTCTG)n|Simple_repeat|Simple_repeat 41030 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-3 chr11 76060822 76061105 + 0.416139936131883 NA intron (NM_026664, intron 19 of 21) intron (NM_026664, intron 19 of 21) -33181 NM_029658 76566 Mm.34131 NM_029658 ENSMUSG00000020846 Rflnb 1500005K14Rik|Fam101b|RefilinB|cfm refilin B protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-8 chr8 77493699 77494367 + 0.416139936131883 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -23023 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-4 chr6 47835734 47836336 + 0.416139936131883 NA intron (NM_173034, intron 1 of 4) CpG 374 NM_173034 272347 Mm.169059 NM_027477 ENSMUSG00000062519 Zfp398 5730513I23Rik zinc finger protein 398 protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-4 chr17 27907247 27907698 + 0.416139936131883 NA intron (NM_026836, intron 2 of 5) CpG 1770 NM_026836 68776 Mm.267998 NM_026836 ENSMUSG00000024218 Taf11 1110038O14Rik|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding common_peak2_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-5 chr3 64996874 64997512 + 0.416139936131883 NA intron (NM_001357358, intron 1 of 13) intron (NM_001357358, intron 1 of 13) 47981 NM_001357358 16497 Mm.316402 NM_010597 ENSMUSG00000027827 Kcnab1 Akr8a8|Kvbeta1.1|mKv(beta)1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 protein-coding common_peak1_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-5 chr5 123906328 123906723 + 0.416139936131883 NA promoter-TSS (NM_026603) promoter-TSS (NM_026603) -750 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak1_36_37_-0.316966772386143_5.08944412725051_0.416139936131883-7 chr5 69557016 69557324 + 0.416139936131883 NA intron (NM_001310631, intron 1 of 14) CpG 246 NM_001310631 231279 Mm.21105 NM_172711 ENSMUSG00000029208 Guf1 4631409J12|AA407526|EF-4 GUF1 homolog, GTPase protein-coding common_peak2_37_37_-0.278764058898438_5.10854548399437_0.416139936131883-3 chr19 44900673 44901024 + 0.416139936131883 NA Intergenic Intergenic -30271 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_44_31_0.211368147426584_5.10568407371329_0.416139936131877-2 chr2 122702123 122702674 + 0.416139936131877 NA exon (NM_001290993, exon 1 of 6) exon (NM_001290993, exon 1 of 6) 265 NM_011774 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-2 chr12 54620783 54621227 + 0.416139936131877 NA Intergenic Intergenic 25007 NR_035439 100316682 NR_035439 ENSMUSG00000106344 Mir1892 Mirn1892|mir-1892|mmu-mir-1892 microRNA 1892 ncRNA common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-6 chr3 123138440 123139020 + 0.416139936131877 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) 97419 NM_080451 118449 Mm.34359 NM_080451 ENSMUSG00000050315 Synpo2 1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo synaptopodin 2 protein-coding common_peak2_44_31_0.211368147426584_5.10568407371329_0.416139936131877-3 chr6 30308052 30308565 + 0.416139936131877 NA Intergenic Intergenic -3769 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-8 chr5 135689279 135689832 + 0.416139936131877 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 410 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak2_44_31_0.211368147426584_5.10568407371329_0.416139936131877 chr2 119662565 119663223 + 0.416139936131877 NA promoter-TSS (NM_001356467) promoter-TSS (NM_001356467) -60 NM_027175 69702 Mm.5390 NM_027175 ENSMUSG00000027305 Ndufaf1 2410001M24Rik|CGI-65|CIA30 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-4 chr17 84083342 84083750 + 0.416139936131877 NA intron (NR_045458, intron 2 of 5) intron (NR_045458, intron 2 of 5) 4886 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-3 chr14 43163960 43164721 + 0.416139936131877 NA Intergenic Intergenic -148764 NM_001244671 100042055 Mm.429109 NM_001244671 ENSMUSG00000095226 Gm10377 - predicted gene 10377 protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-7 chr4 54356520 54356939 + 0.416139936131877 NA Intergenic Intergenic 530684 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877 chr11 96295589 96296238 + 0.416139936131877 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -3161 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-9 chr7 27473799 27474421 + 0.416139936131877 NA intron (NM_133210, intron 1 of 1) intron (NM_133210, intron 1 of 1) 270 NM_133210 170742 Mm.200120 NM_133210 ENSMUSG00000055200 Sertad3 AW124805|D1Mgi51|Rbt1|Sei3 SERTA domain containing 3 protein-coding common_peak1_44_31_0.211368147426584_5.10568407371329_0.416139936131877-5 chr2 168532580 168533238 + 0.416139936131877 NA intron (NM_001037177, intron 5 of 6) intron (NM_001037177, intron 5 of 6) 57456 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak2_44_31_0.211368147426584_5.10568407371329_0.416139936131877-4 chrX 75834222 75834988 + 0.416139936131877 NA intron (NM_001346519, intron 1 of 16) L2a|LINE|L2 8416 NM_001166454 102866 Mm.28777 NM_145629 ENSMUSG00000016382 Pls3 AI115446|AL024105 plastin 3 (T-isoform) protein-coding common_peak2_203_153_0.109769959722517_7.32167152055616_0.416102246974973 chr9 62811054 62812646 + 0.416102246974973 NA promoter-TSS (NM_010193) promoter-TSS (NM_010193) -202 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding common_peak1_98_72_0.151022048171951_6.26533558296599_0.416056689382471 chr10 36974237 36974961 + 0.416056689382471 NA promoter-TSS (NM_008229) promoter-TSS (NM_008229) 55 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding common_peak1_98_72_0.151022048171951_6.26533558296599_0.416056689382471-2 chr10 79683862 79684880 + 0.416056689382471 NA intron (NM_001359818, intron 1 of 4) intron (NM_001359818, intron 1 of 4) 2176 NM_001359817 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding common_peak2_87_81_-0.185431581594268_6.26483621382095_0.416056689382471-2 chr4 3677791 3678878 + 0.416056689382471 NA 5' UTR (NM_010747, exon 1 of 13) 5' UTR (NM_010747, exon 1 of 13) 213 NM_010747 17096 Mm.317331 NM_010747 ENSMUSG00000042228 Lyn AA407514|Hck-2|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding common_peak1_98_72_0.151022048171951_6.26533558296599_0.416056689382471-3 chr14 76741089 76742231 + 0.416056689382471 NA Intergenic Intergenic -18471 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_98_72_0.151022048171951_6.26533558296599_0.416056689382471-4 chr8 11262988 11263845 + 0.416056689382471 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -49389 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_87_81_-0.185431581594268_6.26483621382095_0.416056689382471-3 chr6 119478988 119479999 + 0.416056689382471 NA promoter-TSS (NM_133940) promoter-TSS (NM_133940) -175 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding common_peak2_87_81_-0.185431581594268_6.26483621382095_0.416056689382471 chr17 69383151 69384302 + 0.416056689382471 NA promoter-TSS (NM_009547) promoter-TSS (NM_009547) -78 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding common_peak2_173_130_0.115270642494028_7.09105832278446_0.416027621247612 chr7 13033576 13035271 + 0.416027621247612 NA TTS (NM_001168469) TTS (NM_001168469) 354 NM_001360733 68953 Mm.295670 NM_026885 ENSMUSG00000033916 Chmp2a 1500016L11Rik|mVps2 charged multivesicular body protein 2A protein-coding common_peak2_146_109_0.125779052495605_6.84424923977246_0.415811348124245 chr8 119708024 119709245 + 0.415811348124245 NA intron (NM_026922, intron 1 of 26) intron (NM_026922, intron 1 of 26) 8625 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_60_43_0.187724450665579_5.55329384397009_0.415549183621405-2 chr7 25077375 25078033 + 0.415549183621405 NA intron (NM_175477, intron 1 of 1) CpG 897 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak2_60_43_0.187724450665579_5.55329384397009_0.415549183621405-2 chr3 105059255 105060204 + 0.415549183621405 NA Intergenic Intergenic -6583 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak2_60_43_0.187724450665579_5.55329384397009_0.415549183621405 chr2 132846846 132847538 + 0.415549183621405 NA promoter-TSS (NM_025646) promoter-TSS (NM_025646) 526 NM_001024385 66586 Mm.357342 NM_025646 ENSMUSG00000027357 Crls1 0610009I22Rik|4930557M15Rik|5730490M08Rik cardiolipin synthase 1 protein-coding common_peak1_60_43_0.187724450665579_5.55329384397009_0.415549183621405 chr5 24030005 24030589 + 0.415549183621405 NA promoter-TSS (NM_001310471) promoter-TSS (NM_001310471) 15 NM_001310471 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding common_peak2_60_43_0.187724450665579_5.55329384397009_0.415549183621405-4 chr8 41416490 41417082 + 0.415549183621405 NA intron (NM_013522, intron 1 of 8) CpG 332 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding common_peak2_60_43_0.187724450665579_5.55329384397009_0.415549183621405-3 chr5 91517709 91518410 + 0.415549183621405 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 359 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak2_60_43_0.187724450665579_5.55329384397009_0.415549183621405-5 chr8 90825198 90825839 + 0.415549183621405 NA Intergenic Intergenic -3317 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_51_50_-0.253942147089626_5.54545426842668_0.415549183621393-3 chr15 77920956 77921470 + 0.415549183621393 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 7781 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_51_50_-0.253942147089626_5.54545426842668_0.415549183621393 chr12 69183212 69184003 + 0.415549183621393 NA promoter-TSS (NM_146035) promoter-TSS (NM_146035) 460 NM_025589 66483 Mm.379115 NM_025589 ENSMUSG00000049751 Rpl36al 2410038A03Rik|RPL36A ribosomal protein L36A-like protein-coding common_peak2_51_50_-0.253942147089626_5.54545426842668_0.415549183621393-4 chr6 72553001 72553676 + 0.415549183621393 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 3691 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_51_50_-0.253942147089626_5.54545426842668_0.415549183621393 chr11 58103158 58103813 + 0.415549183621393 NA promoter-TSS (NM_001356477) promoter-TSS (NM_001356477) -485 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak2_51_50_-0.253942147089626_5.54545426842668_0.415549183621393-2 chr12 75596504 75597100 + 0.415549183621393 NA promoter-TSS (NM_012024) promoter-TSS (NM_012024) -602 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak2_252_221_-0.109482185747831_7.73967477347619_0.4154753889538 chr11 98201749 98204638 + 0.4154753889538 NA promoter-TSS (NM_001109626) promoter-TSS (NM_001109626) -112 NM_001109628 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak2_252_221_-0.109482185747831_7.73967477347619_0.4154753889538-2 chr5 3342036 3344925 + 0.4154753889538 NA promoter-TSS (NM_009873) promoter-TSS (NM_009873) -413 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_219_193_-0.115190499982677_7.54231759219579_0.415467930500398 chr15 62328708 62330805 + 0.415467930500398 NA Intergenic Intergenic -110305 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_121_90_0.132306449530936_6.57394786496416_0.415370840322132 chr12 69892032 69893131 + 0.415370840322132 NA promoter-TSS (NM_178628) promoter-TSS (NM_178628) -524 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding common_peak2_159_143_-0.14139299719037_7.09922850284713_0.415187683217432 chr11 69995789 69997181 + 0.415187683217432 NA promoter-TSS (NM_001291127) promoter-TSS (NM_001291127) -456 NM_001291126 78246 Mm.20805 NM_030064 ENSMUSG00000018572 Phf23 JUNE-1 PHD finger protein 23 protein-coding common_peak1_160_143_-0.132467629645173_7.10369118661973_0.415187683217432 chr14 26638128 26639434 + 0.415187683217432 NA intron (NM_007479, intron 1 of 5) intron (NM_007479, intron 1 of 5) 647 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding common_peak2_68_65_-0.220705215334744_5.93404151169108_0.415025079468056-4 chr7 110768435 110769496 + 0.415025079468056 NA intron (NM_001276301, intron 1 of 14) CpG 759 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_68_65_-0.220705215334744_5.93404151169108_0.415025079468056-2 chr13 71962651 71963759 + 0.415025079468056 NA intron (NM_010573, intron 1 of 3) CpG 518 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak1_68_65_-0.220705215334744_5.93404151169108_0.415025079468056 chr13 32924304 32924980 + 0.415025079468056 NA Intergenic Intergenic -26502 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak2_68_65_-0.220705215334744_5.93404151169108_0.415025079468056-3 chr4 132274499 132275366 + 0.415025079468056 NA intron (NM_025579, intron 1 of 5) intron (NM_025579, intron 1 of 5) 557 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding common_peak2_68_65_-0.220705215334744_5.93404151169108_0.415025079468056 chr12 86824496 86825227 + 0.415025079468056 NA Intergenic Intergenic 59953 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_68_65_-0.220705215334744_5.93404151169108_0.415025079468056-2 chr18 60670026 60670751 + 0.415025079468056 NA non-coding (NR_045401, exon 3 of 3) non-coding (NR_045401, exon 3 of 3) 6978 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_69_65_-0.200093106385895_5.94434756616551_0.415025079468056 chr3 135674457 135675652 + 0.415025079468056 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 16493 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_78_57_0.159586671147705_5.93777433070142_0.415025079468044-2 chr2 121139944 121140636 + 0.415025079468044 NA promoter-TSS (NM_001290812) promoter-TSS (NM_001290812) -138 NM_001355748 75894 Mm.384805 NM_029475 ENSMUSG00000027259 Adal 4930578F03Rik adenosine deaminase-like protein-coding common_peak1_78_57_0.159586671147705_5.93777433070142_0.415025079468044 chr15 3582874 3583536 + 0.415025079468044 NA 5' UTR (NM_010284, exon 1 of 11) 5' UTR (NM_010284, exon 1 of 11) 147 NM_001048178 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding common_peak2_78_57_0.159586671147705_5.93777433070142_0.415025079468044 chr2 53191390 53192032 + 0.415025079468044 NA promoter-TSS (NM_022989) promoter-TSS (NM_022989) -373 NM_022989 65103 Mm.37623 NM_022989 ENSMUSG00000026960 Arl6ip6 2310057C01Rik|2610529A11Rik|Aip-6 ADP-ribosylation factor-like 6 interacting protein 6 protein-coding common_peak2_189_168_-0.126169042129646_7.33779491521736_0.414676428523872 chr8 126944305 126945835 + 0.414676428523872 NA intron (NM_024214, intron 1 of 4) intron (NM_024214, intron 1 of 4) 851 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_88_82_-0.186732204946997_6.28167332887343_0.414570791443893 chr17 83953661 83955039 + 0.414570791443893 NA Intergenic Intergenic -44202 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_88_82_-0.186732204946997_6.28167332887343_0.414570791443893 chr10 120624674 120626067 + 0.414570791443893 NA Intergenic Intergenic -140362 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_99_73_0.145790516950114_6.28234862410401_0.414570791443893 chr1 171247933 171249008 + 0.414570791443893 NA Intergenic Intergenic -1348 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak2_255_223_-0.105534796132785_7.75458752399121_0.414412819558925 chr8 126826621 126828002 + 0.414412819558925 NA Intergenic Intergenic -21709 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_161_144_-0.133581616460565_7.11311828178465_0.414359929810913 chr11 93885286 93886668 + 0.414359929810913 NA promoter-TSS (NM_134012) promoter-TSS (NM_134012) -211 NM_001013375 217109 Mm.379350 NM_001013375 ENSMUSG00000054079 Utp18 6230425C22Rik|6430513M13|Wdr50 UTP18 small subunit processome component protein-coding common_peak1_122_91_0.12823321377088_6.58767856294245_0.414178705333274 chr15 88751710 88752658 + 0.414178705333274 NA intron (NM_181412, intron 1 of 2) CpG 473 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding common_peak1_352_269_0.0852587471600401_8.11944497063085_0.414120751642302 chr12 86800311 86803363 + 0.414120751642302 NA Intergenic Intergenic 67468 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_440_338_0.0757779255381319_8.44303042590541_0.413835637902012 chr6 31080862 31084316 + 0.413835637902012 NA Intergenic Intergenic -19496 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_395_303_0.0788091344618955_8.28733208067453_0.413795166317913 chr15 102976421 102979290 + 0.413795166317913 NA intron (NM_008272, intron 1 of 2) intron (NM_008272, intron 1 of 2) 823 NM_008272 15427 Mm.4765 NM_008272 ENSMUSG00000036139 Hoxc9 Hox-3.2 homeobox C9 protein-coding common_peak2_313_239_0.0874717358426436_7.95062646352984_0.413579422652539 chr11 5097767 5100016 + 0.413579422652539 NA promoter-TSS (NR_110961) promoter-TSS (NR_110961) 197 NM_001283062 14030 Mm.142822 NM_007968 ENSMUSG00000009079 Ewsr1 Ews|Ewsh Ewing sarcoma breakpoint region 1 protein-coding common_peak1_177_133_0.115163056368911_7.12367071864223_0.413544097719307 chr7 55961603 55963168 + 0.413544097719307 NA promoter-TSS (NR_015495) promoter-TSS (NR_015495) 108 NM_001256133 93790 Mm.37249 NM_023647 ENSMUSG00000030452 Nipa2 2600017P10Rik|3830408P04Rik|AB041581 non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) protein-coding common_peak1_177_133_0.115163056368911_7.12367071864223_0.413544097719307-2 chr8 106892814 106894123 + 0.413544097719307 NA promoter-TSS (NM_011574) promoter-TSS (NM_011574) 125 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding common_peak1_70_66_-0.201468448751041_5.96535496608225_0.413183870294151-3 chr7 130645433 130646008 + 0.413183870294151 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -46836 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak2_80_58_0.170739403765772_5.96801275124473_0.413183870294151 chr11 3894354 3895082 + 0.413183870294151 NA promoter-TSS (NM_173745) promoter-TSS (NM_173745) 408 NM_026150 67430 Mm.347950 NM_026150 ENSMUSG00000020434 4921536K21Rik AV043724 RIKEN cDNA 4921536K21 gene protein-coding common_peak1_79_58_0.152943934463345_5.95911501659351_0.413183870294151-2 chr2 30237760 30238473 + 0.413183870294151 NA promoter-TSS (NR_028299) promoter-TSS (NR_028299) 347 NM_177725 241296 Mm.389232 NM_177725 ENSMUSG00000007476 Lrrc8a Lrrc8|mKIAA1437 leucine rich repeat containing 8A protein-coding common_peak2_79_58_0.152943934463345_5.95911501659351_0.413183870294151-2 chr2 122630605 122631504 + 0.413183870294151 NA exon (NM_001033256, exon 1 of 2) exon (NM_001033256, exon 1 of 2) 429 NM_001033256 214616 Mm.271306 NM_001033256 Spata5l1 AV141009|C130039A10Rik spermatogenesis associated 5-like 1 protein-coding common_peak1_70_66_-0.201468448751041_5.96535496608225_0.413183870294151-6 chr9 102636954 102637580 + 0.413183870294151 NA Intergenic Intergenic 10971 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_80_58_0.170739403765772_5.96801275124473_0.413183870294151 chr2 122630608 122631526 + 0.413183870294151 NA exon (NM_001033256, exon 1 of 2) exon (NM_001033256, exon 1 of 2) 442 NM_001033256 214616 Mm.271306 NM_001033256 Spata5l1 AV141009|C130039A10Rik spermatogenesis associated 5-like 1 protein-coding common_peak1_70_66_-0.201468448751041_5.96535496608225_0.413183870294151-2 chr12 78749020 78749660 + 0.413183870294151 NA intron (NM_019579, intron 1 of 14) CpG 393 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak2_80_58_0.170739403765772_5.96801275124473_0.413183870294151-2 chr5 122371519 122372279 + 0.413183870294151 NA promoter-TSS (NM_026883) promoter-TSS (NM_026883) 64 NM_026883 68948 Mm.474469 NM_026883 ENSMUSG00000029463 Fam216a 1500011H22Rik family with sequence similarity 216, member A protein-coding common_peak2_79_58_0.152943934463345_5.95911501659351_0.413183870294151-4 chr9 7837208 7837898 + 0.413183870294151 NA promoter-TSS (NM_001291503) promoter-TSS (NM_001291503) -496 NM_007465 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak1_70_66_-0.201468448751041_5.96535496608225_0.413183870294151-4 chr8 36819565 36820600 + 0.413183870294151 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -87028 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_79_58_0.152943934463345_5.95911501659351_0.413183870294151-3 chr3 122619034 122619655 + 0.413183870294151 NA intron (NM_001114665, intron 1 of 15) CpG 370 NM_153118 214459 Mm.209491 NM_153118 ENSMUSG00000039735 Fnbp1l 2610318I01Rik|AW548221|TOCA1|toca-1 formin binding protein 1-like protein-coding common_peak1_70_66_-0.201468448751041_5.96535496608225_0.413183870294151 chr11 5788600 5789435 + 0.413183870294151 NA intron (NM_001146309, intron 1 of 12) intron (NM_001146309, intron 1 of 12) 534 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak2_79_58_0.152943934463345_5.95911501659351_0.413183870294151 chr14 57826230 57827089 + 0.413183870294151 NA promoter-TSS (NM_198605) promoter-TSS (NM_198605) 420 NM_026401 67840 Mm.319530 NM_026401 ENSMUSG00000021967 Mrpl57 2610025P17Rik|AV005697|Mrp63 mitochondrial ribosomal protein L57 protein-coding common_peak1_80_58_0.170739403765772_5.96801275124473_0.413183870294151-2 chr6 35252732 35253154 + 0.413183870294151 NA non-coding (NR_027875, exon 1 of 3) non-coding (NR_027875, exon 1 of 3) 211 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak1_79_58_0.152943934463345_5.95911501659351_0.413183870294151 chr19 27428886 27429759 + 0.413183870294151 NA promoter-TSS (NR_027987) promoter-TSS (NR_027987) 586 NM_177474 52874 Mm.261027 NM_177474 ENSMUSG00000041360 Pum3 1110069H02Rik|AA675048|D19Bwg1357e pumilio RNA-binding family member 3 protein-coding common_peak2_70_66_-0.201468448751041_5.96535496608225_0.413183870294151 chr11 121738048 121739073 + 0.413183870294151 NA Intergenic Intergenic 36133 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_70_66_-0.201468448751041_5.96535496608225_0.413183870294151-5 chr9 57708549 57709357 + 0.413183870294151 NA intron (NM_153799, intron 1 of 6) CpG 384 NM_153799 353190 Mm.268104 NM_153799 ENSMUSG00000038957 Edc3 AA517853|Lsm16|Yjdc enhancer of mRNA decapping 3 protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651-2 chr14 7841985 7842925 + 0.413133827688651 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 24498 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_61_44_0.178596443223107_5.58115131794123_0.413133827688651-2 chr13 104227805 104228774 + 0.413133827688651 NA promoter-TSS (NR_075088) promoter-TSS (NR_075088) -322 NM_181061 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak1_61_44_0.178596443223107_5.58115131794123_0.413133827688651 chr1 180386900 180387467 + 0.413133827688651 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -56634 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_53_51_-0.227892867240932_5.58649328452063_0.413133827688651 chr11 86992718 86993591 + 0.413133827688651 NA intron (NM_001005341, intron 1 of 4) CpG 608 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651-4 chr18 7120354 7121533 + 0.413133827688651 NA intron (NM_001357492, intron 20 of 20) intron (NM_001357492, intron 20 of 20) -116164 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak2_61_44_0.178596443223107_5.58115131794123_0.413133827688651-2 chr9 32711216 32712101 + 0.413133827688651 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 15616 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651-7 chrX 74270895 74271762 + 0.413133827688651 NA intron (NM_052835, intron 2 of 6) intron (NM_052835, intron 2 of 6) 512 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding common_peak1_52_51_-0.254669662871231_5.57310488670548_0.413133827688651 chr8 13675814 13676391 + 0.413133827688651 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 1485 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651-6 chr7 126928997 126929739 + 0.413133827688651 NA intron (NM_172747, intron 1 of 5) intron (NM_172747, intron 1 of 5) 489 NM_172747 233877 Mm.245897 NM_172747 ENSMUSG00000030685 Kctd13 1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1 potassium channel tetramerisation domain containing 13 protein-coding common_peak2_61_44_0.178596443223107_5.58115131794123_0.413133827688651 chr14 43529410 43530240 + 0.413133827688651 NA Intergenic Intergenic 78188 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding common_peak2_52_51_-0.254669662871231_5.57310488670548_0.413133827688651-3 chr2 152675868 152676364 + 0.413133827688651 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 6655 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651 chr11 103966808 103967363 + 0.413133827688651 NA 5' UTR (NM_007477, exon 1 of 5) 5' UTR (NM_007477, exon 1 of 5) 214 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak1_61_44_0.178596443223107_5.58115131794123_0.413133827688651-5 chr8 123040101 123041031 + 0.413133827688651 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 1718 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_52_51_-0.254669662871231_5.57310488670548_0.413133827688651-2 chr17 34981906 34982385 + 0.413133827688651 NA promoter-TSS (NM_030597) promoter-TSS (NM_030597) 15 NM_030597 27756 Mm.165735 NM_030597 ENSMUSG00000007050 Lsm2 D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651-3 chr16 38452814 38453391 + 0.413133827688651 NA promoter-TSS (NM_007414) promoter-TSS (NM_007414) -413 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding common_peak1_61_44_0.178596443223107_5.58115131794123_0.413133827688651-3 chr15 66884520 66885469 + 0.413133827688651 NA Intergenic Intergenic -6399 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_61_44_0.178596443223107_5.58115131794123_0.413133827688651-3 chrX 142389730 142390421 + 0.413133827688651 NA intron (NM_001033600, intron 1 of 15) intron (NM_001033600, intron 1 of 15) 460 NM_001033600 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding common_peak2_52_51_-0.254669662871231_5.57310488670548_0.413133827688651 chr10 24391473 24391987 + 0.413133827688651 NA Intergenic Intergenic 168213 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_61_44_0.178596443223107_5.58115131794123_0.413133827688651-4 chr7 67741080 67741706 + 0.413133827688651 NA intron (NM_207663, intron 2 of 4) intron (NM_207663, intron 2 of 4) 18349 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding common_peak2_53_51_-0.227892867240932_5.58649328452063_0.413133827688651-5 chr2 136890955 136891473 + 0.413133827688651 NA promoter-TSS (NM_028201) promoter-TSS (NM_028201) -4 NM_028201 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding common_peak2_295_256_-0.0958287468561707_7.95771017576579_0.41312543647953 chr15 99364197 99366225 + 0.41312543647953 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 5271 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_100_74_0.140679208761533_6.29915829487665_0.413122813965767-2 chr19 47887032 47887743 + 0.413122813965767 NA Intergenic Intergenic 21593 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak2_101_74_0.154792789494781_6.30621508524327_0.413122813965767-3 chr8 53511793 53512607 + 0.413122813965767 NA intron (NM_001005847, intron 1 of 8) intron (NM_001005847, intron 1 of 8) 498 NM_001005847 11593 Mm.334535 NM_001005847 ENSMUSG00000031521 Aga AW060726 aspartylglucosaminidase protein-coding common_peak1_89_83_-0.188004254925421_6.29831529531605_0.413122813965767 chr2 158360341 158361432 + 0.413122813965767 NA intron (NR_015463, intron 2 of 5) intron (NR_015463, intron 2 of 5) 623 NR_015463 68108 Mm.119198 NR_015463 Snhg17 9430008C03Rik small nucleolar RNA host gene 17 ncRNA common_peak1_101_74_0.154792789494781_6.30621508524327_0.413122813965767 chr18 34777032 34777847 + 0.413122813965767 NA intron (NM_001081256, intron 1 of 23) CpG 431 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_100_74_0.140679208761533_6.29915829487665_0.413122813965767-3 chr3 107775431 107776306 + 0.413122813965767 NA Intergenic Intergenic -15399 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_101_74_0.154792789494781_6.30621508524327_0.413122813965767-2 chr7 133775930 133777178 + 0.413122813965767 NA promoter-TSS (NM_025850) promoter-TSS (NM_025850) 249 NM_001286032 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak2_89_83_-0.188004254925421_6.29831529531605_0.413122813965767 chr18 83817757 83818822 + 0.413122813965767 NA Intergenic Intergenic 268273 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak2_101_74_0.154792789494781_6.30621508524327_0.413122813965767 chr15 98568026 98569044 + 0.413122813965767 NA promoter-TSS (NM_009833) promoter-TSS (NM_009833) -899 NM_009833 12455 Mm.29941 NM_009833 ENSMUSG00000011960 Ccnt1 2810478G24Rik|AI115585|CycT1 cyclin T1 protein-coding common_peak1_101_74_0.154792789494781_6.30621508524327_0.413122813965767-2 chr8 119777602 119778397 + 0.413122813965767 NA intron (NM_028883, intron 1 of 7) intron (NM_028883, intron 1 of 7) 417 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak1_100_74_0.140679208761533_6.29915829487665_0.413122813965767 chr11 88099306 88099970 + 0.413122813965767 NA non-coding (NR_045499, exon 4 of 4) non-coding (NR_045499, exon 4 of 4) 492 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_397_305_0.0765655300820587_8.29567060773368_0.413076719400967 chr9 96785899 96788795 + 0.413076719400967 NA Intergenic Intergenic 21785 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_112_102_-0.156177825522967_6.60841161442174_0.413011183519153 chr8 70527330 70528192 + 0.413011183519153 NA promoter-TSS (NM_001199631) promoter-TSS (NM_001199631) 18 NM_010223 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding common_peak1_112_102_-0.156177825522967_6.60841161442174_0.413011183519153 chr8 70527293 70528197 + 0.413011183519153 NA promoter-TSS (NM_001199631) promoter-TSS (NM_001199631) 2 NM_010223 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|FKBPR38|Fkbp38|mFKBP38 FK506 binding protein 8 protein-coding common_peak1_111_102_-0.168911392537782_6.60204483091433_0.413011183519153 chr6 30048291 30049201 + 0.413011183519153 NA intron (NM_001164226, intron 1 of 11) CpG 758 NM_001164227 18181 Mm.259258 NM_010938 ENSMUSG00000058440 Nrf1 C87038|D6Ertd415e nuclear respiratory factor 1 protein-coding common_peak2_111_102_-0.168911392537782_6.60204483091433_0.413011183519153 chr9 54863856 54864628 + 0.413011183519153 NA intron (NM_022655, intron 1 of 21) intron (NM_022655, intron 1 of 21) 487 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding common_peak1_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-3 chr4 117133455 117133857 + 0.412842868820461 NA exon (NM_013807, exon 1 of 15) exon (NM_013807, exon 1 of 15) 307 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo like kinase 3 protein-coding common_peak1_38_38_-0.27902844217968_5.14588799777241_0.412842868820461 chr1 180330476 180331279 + 0.412842868820461 NA promoter-TSS (NR_003623) promoter-TSS (NR_003623) -328 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-2 chr16 45837447 45837954 + 0.412842868820461 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 6678 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-7 chr8 35665349 35665810 + 0.412842868820461 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -76559 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-2 chr12 112951890 112952544 + 0.412842868820461 NA Intergenic Intergenic -10075 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-6 chr3 40949872 40950772 + 0.412842868820461 NA promoter-TSS (NM_001040399) promoter-TSS (NM_001040399) -309 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-4 chr18 75497174 75497887 + 0.412842868820461 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -17115 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-5 chr19 4838419 4839116 + 0.412842868820461 NA promoter-TSS (NM_207268) promoter-TSS (NM_207268) 555 NM_016892 12460 Mm.434411 NM_016892 ENSMUSG00000034108 Ccs Ccsd copper chaperone for superoxide dismutase protein-coding common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461-3 chr17 75344239 75345001 + 0.412842868820461 NA intron (NM_001331234, intron 20 of 28) intron (NM_001331234, intron 20 of 28) -91285 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak2_38_38_-0.27902844217968_5.14588799777241_0.412842868820461 chr11 19919623 19920261 + 0.412842868820461 NA Intergenic Intergenic -4500 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-2 chr17 26615140 26615814 + 0.412842868820455 NA intron (NM_026170, intron 3 of 9) B1_Mus2|SINE|Alu 53965 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455 chr16 84834464 84834790 + 0.412842868820455 NA promoter-TSS (NM_008065) promoter-TSS (NM_008065) 349 NM_001358500 11957 Mm.353 NM_016755 ENSMUSG00000022890 Atp5j CF6 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-3 chr19 44746852 44747128 + 0.412842868820455 NA Intergenic Intergenic -10404 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-8 chr9 4375831 4376321 + 0.412842868820455 NA promoter-TSS (NM_145609) promoter-TSS (NM_145609) -476 NM_145609 78100 Mm.206549 NM_145609 ENSMUSG00000041124 Msantd4 8430410K20Rik|Mysantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-8 chr8 71611100 71611606 + 0.412842868820455 NA exon (NM_146211, exon 1 of 12) exon (NM_146211, exon 1 of 12) 329 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-5 chr4 54356489 54356933 + 0.412842868820455 NA Intergenic Intergenic 530666 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-6 chr6 30401477 30402310 + 0.412842868820455 NA promoter-TSS (NM_001311087) promoter-TSS (NM_001311087) 38 NM_001311087 76788 Mm.277308 NM_029742 ENSMUSG00000029775 Klhdc10 2410127E18Rik|AI593221|mKIAA0265 kelch domain containing 10 protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-3 chr11 101641273 101641734 + 0.412842868820455 NA Intergenic CpG 13554 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-2 chr11 48817734 48818273 + 0.412842868820455 NA promoter-TSS (NM_145377) promoter-TSS (NM_145377) -612 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-7 chr7 139252332 139253028 + 0.412842868820455 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 4198 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-5 chr7 130965112 130965526 + 0.412842868820455 NA intron (NM_019564, intron 3 of 8) intron (NM_019564, intron 3 of 8) 29116 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455 chr1 93824685 93825516 + 0.412842868820455 NA promoter-TSS (NM_178882) promoter-TSS (NM_178882) -140 NM_178882 98314 Mm.383401 NM_178882 ENSMUSG00000073609 D2hgdh AA408776|AA408778|AI325464 D-2-hydroxyglutarate dehydrogenase protein-coding common_peak2_45_32_0.198459182437801_5.14362371057735_0.412842868820455-4 chr2 58548380 58549080 + 0.412842868820455 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 12680 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-4 chr6 108531808 108532274 + 0.412842868820455 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 42298 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-7 chr8 54565554 54566089 + 0.412842868820455 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 15490 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-6 chr8 11360753 11361294 + 0.412842868820455 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -48197 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_45_32_0.198459182437801_5.14362371057735_0.412842868820455-9 chr9 65630761 65631389 + 0.412842868820455 NA intron (NM_028030, intron 1 of 7) CpG 493 NM_028030 71973 Mm.29148 NM_028030 ENSMUSG00000032387 Rbpms2 2400008B06Rik|AI316523 RNA binding protein with multiple splicing 2 protein-coding common_peak2_163_146_-0.13576775680917_7.13178846643178_0.412739931169346 chr9 71484892 71486102 + 0.412739931169346 NA promoter-TSS (NM_001164793) promoter-TSS (NM_001164793) 486 NM_178602 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding common_peak1_209_158_0.105198680342414_7.36548229545556_0.412602759429344 chr3 37640910 37642550 + 0.412602759429344 NA intron (NM_011896, intron 2 of 2) intron (NM_011896, intron 2 of 2) 1783 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092-7 chr9 117962421 117962696 + 0.412012472183092 NA Intergenic Intergenic -77964 NM_001286507 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-22 chr8 73198688 73199036 + 0.412012472183092 NA intron (NM_001317391, intron 3 of 15) intron (NM_001317391, intron 3 of 15) 154678 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-2 chr11 75410053 75410315 + 0.412012472183092 NA exon (NM_011340, exon 8 of 8) exon (NM_011340, exon 8 of 8) 12439 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-8 chr9 122177986 122178465 + 0.412012472183092 NA intron (NM_001271873, intron 12 of 12) intron (NM_001271873, intron 12 of 12) 60766 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-5 chr12 51347613 51347999 + 0.412012472183092 NA promoter-TSS (NM_001167963) promoter-TSS (NM_001167963) -424 NM_001167964 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding unique_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-3 chr17 27142220 27142621 + 0.412012472183092 NA Intergenic Intergenic -8529 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092 chr12 69985760 69986190 + 0.412012472183092 NA intron (NM_022028, intron 1 of 4) intron (NM_022028, intron 1 of 4) 1027 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-21 chr7 28825393 28825774 + 0.412012472183092 NA intron (NM_016772, intron 1 of 9) intron (NM_016772, intron 1 of 9) 245 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-9 chr17 36024715 36025030 + 0.412012472183092 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -4312 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-2 chr10 94688850 94689121 + 0.412012472183092 NA promoter-TSS (NR_015524) promoter-TSS (NR_015524) 195 NM_029852 77048 Mm.296971 NM_029852 ENSMUSG00000020024 Cep83 2600001G24Rik|4921537D05Rik|5730513H21Rik|Ccdc41 centrosomal protein 83 protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-4 chr17 56289946 56290522 + 0.412012472183092 NA intron (NM_025836, intron 1 of 7) intron (NM_025836, intron 1 of 7) 277 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092-3 chr6 91473174 91473446 + 0.412012472183092 NA promoter-TSS (NM_028766) promoter-TSS (NM_028766) 113 NM_133928 72170 Mm.41622 NM_133928 ENSMUSG00000034203 Chchd4 2410012P20Rik|2810014D17Rik|AI838740 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding unique_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-2 chr1 170006140 170006573 + 0.412012472183092 NA intron (NM_022563, intron 3 of 16) intron (NM_022563, intron 3 of 16) 36947 NR_040438 67303 Mm.396611 NR_040438 ENSMUSG00000097503 3110045C21Rik AI838577 RIKEN cDNA 3110045C21 gene ncRNA common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092-5 chr7 140882527 140882801 + 0.412012472183092 NA promoter-TSS (NM_001177804) promoter-TSS (NM_001177804) 270 NM_011875 23997 Mm.29760 NM_011875 ENSMUSG00000025487 Psmd13 S11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-8 chr16 35938783 35939229 + 0.412012472183092 NA promoter-TSS (NM_001013371) promoter-TSS (NM_001013371) 21 NM_001013371 209200 Mm.390852 NM_001013371 ENSMUSG00000049502 Dtx3l AU042200|BC023741 deltex 3-like, E3 ubiquitin ligase protein-coding common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092 chr14 121825717 121826262 + 0.412012472183092 NA Intergenic Intergenic -28255 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092 chr10 77516114 77516490 + 0.412012472183092 NA promoter-TSS (NM_133998) promoter-TSS (NM_133998) -489 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-20 chr5 64232779 64233169 + 0.412012472183092 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 2617 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-5 chr4 70535229 70535622 + 0.412012472183092 NA promoter-TSS (NM_172694) promoter-TSS (NM_172694) -497 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-14 chr2 113450241 113450667 + 0.412012472183092 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 9390 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-4 chr19 46479261 46479702 + 0.412012472183092 NA intron (NM_001025391, intron 10 of 11) intron (NM_001025391, intron 10 of 11) -22167 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-6 chr8 86730621 86731117 + 0.412012472183092 NA intron (NM_009172, intron 1 of 1) intron (NM_009172, intron 1 of 1) -14830 NR_027829 666945 Mm.391806 NR_027829 Gm10638 - predicted gene 10638 ncRNA common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-7 chr9 78633268 78633966 + 0.412012472183092 NA intron (NM_153098, intron 2 of 32) intron (NM_153098, intron 2 of 32) 18071 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092-4 chr6 122870171 122870735 + 0.412012472183092 NA Intergenic Intergenic -4104 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-10 chr17 46277237 46277648 + 0.412012472183092 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 5584 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-4 chr14 25457271 25457604 + 0.412012472183092 NA Intergenic CpG -1748 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-19 chr5 32610689 32610993 + 0.412012472183092 NA promoter-TSS (NM_001205133) promoter-TSS (NM_001205133) -330 NM_001205133 22612 Mm.4558 NM_009535 ENSMUSG00000014932 Yes1 Yes|p61-Yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-3 chr11 78399041 78399558 + 0.412012472183092 NA intron (NM_022411, intron 9 of 11) intron (NM_022411, intron 9 of 11) 4814 NR_003282 790911 Mm.457257 NR_003282 ENSMUSG00000085747 Slc13a2os Gm11194 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand ncRNA unique_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-4 chr2 180219605 180220239 + 0.412012472183092 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 5937 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-2 chr15 80020576 80021112 + 0.412012472183092 NA Intergenic Intergenic -6036 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding unique_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-5 chr4 144950025 144950648 + 0.412012472183092 NA Intergenic Intergenic 57199 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-23 chr9 124281705 124282065 + 0.412012472183092 NA Intergenic Intergenic 30809 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-6 chr16 25066876 25067281 + 0.412012472183092 NA non-coding (NR_040374, exon 3 of 3) non-coding (NR_040374, exon 3 of 3) 7439 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092 chr1 58654351 58654705 + 0.412012472183092 NA intron (NR_045007, intron 1 of 1) intron (NR_045007, intron 1 of 1) 1887 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-16 chr3 87072515 87073137 + 0.412012472183092 NA Intergenic Intergenic -73486 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-5 chr6 8509455 8509727 + 0.412012472183092 NA promoter-TSS (NM_133236) promoter-TSS (NM_133236) -9 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092-2 chr18 13384747 13385213 + 0.412012472183092 NA Intergenic Intergenic 377990 NM_153087 225192 Mm.207073 NM_153087 ENSMUSG00000037346 Hrh4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-7 chr7 121033977 121034337 + 0.412012472183092 NA promoter-TSS (NM_021554) promoter-TSS (NM_021554) -288 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-12 chr19 46503202 46503611 + 0.412012472183092 NA intron (NM_053100, intron 1 of 5) UCON4|Unknown|Unknown 1758 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-6 chr7 127244560 127244862 + 0.412012472183092 NA promoter-TSS (NM_001360916) promoter-TSS (NM_001360916) 185 NM_177362 244216 Mm.41038 NM_177362 ENSMUSG00000054716 Zfp771 G630024C07Rik|Znf771 zinc finger protein 771 protein-coding unique_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-2 chr12 13020779 13021180 + 0.412012472183092 NA Intergenic Intergenic -79143 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-17 chr3 142700502 142700839 + 0.412012472183092 NA promoter-TSS (NM_001293560) promoter-TSS (NM_001293560) -378 NM_173763 229905 Mm.289643 NM_173763 ENSMUSG00000040213 Kyat3 Ccbl2|KATIII|Kat3 kynurenine aminotransferase 3 protein-coding unique_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-3 chr12 53147417 53147929 + 0.412012472183092 NA intron (NM_198111, intron 13 of 13) intron (NM_198111, intron 13 of 13) -101004 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-5 chr14 29080034 29080550 + 0.412012472183092 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 62084 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-13 chr2 72315175 72315784 + 0.412012472183092 NA intron (NM_023057, intron 2 of 19) RLTR12E|LTR|ERVK 29778 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-6 chr18 80550101 80550463 + 0.412012472183092 NA Intergenic Intergenic -5736 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-18 chr4 45514568 45514922 + 0.412012472183092 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 16083 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092 chr1 88559192 88559608 + 0.412012472183092 NA intron (NR_037971, intron 4 of 5) intron (NR_037971, intron 4 of 5) 7883 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-3 chr10 116297405 116297873 + 0.412012472183092 NA Intergenic MER21C|LTR|ERVL -3735 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-3 chr17 13921033 13921357 + 0.412012472183092 NA Intergenic Intergenic -27178 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding unique_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092 chr1 160056584 160057145 + 0.412012472183092 NA intron (NM_001162896, intron 1 of 2) ID_B1|SINE|B4 12484 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-7 chr16 32068273 32068769 + 0.412012472183092 NA intron (NM_177326, intron 1 of 14) intron (NM_177326, intron 1 of 14) 10821 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding common_peak2_32_22_0.243504028340745_4.64531397022739_0.412012472183092-6 chr9 72196937 72197181 + 0.412012472183092 NA Intergenic Intergenic -77829 NM_146224 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-15 chr3 86793681 86794115 + 0.412012472183092 NA exon (NM_001195499, exon 14 of 18) exon (NM_001195499, exon 14 of 18) 126986 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding common_peak1_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-4 chr11 60879124 60879449 + 0.412012472183092 NA promoter-TSS (NM_001168507) promoter-TSS (NM_001168507) -248 NM_001168507 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092-11 chr17 94749542 94749907 + 0.412012472183092 NA promoter-TSS (NR_024720) promoter-TSS (NR_024720) 295 NM_001357136 76781 Mm.139146 NM_176917 ENSMUSG00000055660 Mettl4 2410198H06Rik|A730091E08Rik|AV296509|HsT661 methyltransferase like 4 protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-2 chr15 60833768 60834092 + 0.412012472183092 NA Intergenic Intergenic -8850 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak1_32_22_0.243504028340745_4.64531397022739_0.412012472183092 chr1 45627374 45627767 + 0.412012472183092 NA Intergenic Intergenic -124288 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_26_27_-0.327753091584201_4.6434783762655_0.412012472183092-6 chr6 70824044 70824497 + 0.412012472183092 NA Intergenic Intergenic -20245 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_179_135_0.109795347029756_7.14236051476522_0.411947181654529-2 chr2 180701353 180702793 + 0.411947181654529 NA promoter-TSS (NM_175551) promoter-TSS (NM_175551) 29 NM_011805 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak1_179_135_0.109795347029756_7.14236051476522_0.411947181654529-3 chr8 109564804 109566327 + 0.411947181654529 NA promoter-TSS (NM_175646) promoter-TSS (NM_175646) 296 NR_151644 64340 Mm.23705 NM_178380 ENSMUSG00000037993 Dhx38 5730550P09Rik|AI325984|AW540902|Ddx38|KIAA0224|Prp16 DEAH (Asp-Glu-Ala-His) box polypeptide 38 protein-coding common_peak1_179_135_0.109795347029756_7.14236051476522_0.411947181654529 chr13 102897474 102899339 + 0.411947181654529 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 138151 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_194_172_-0.122707511346766_7.37327447196334_0.411928255729072 chr11 52098743 52100044 + 0.411928255729072 NA intron (NM_019411, intron 1 of 6) CpG 569 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak2_210_159_0.102958859271274_7.373407524523_0.411928255729022 chr7 111081572 111082981 + 0.411928255729022 NA intron (NM_013507, intron 1 of 21) CpG 754 NM_001040131 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak2_125_93_0.131726466995953_6.62045208517561_0.411867520083741 chr8 13869339 13870357 + 0.411867520083741 NA intron (NM_181854, intron 1 of 1) CpG 207 NM_181854 101994 Mm.289346 NM_181854 ENSMUSG00000047710 Champ1 AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802 chromosome alignment maintaining phosphoprotein 1 protein-coding common_peak1_125_93_0.131726466995953_6.62045208517561_0.411867520083741 chr2 129197401 129198571 + 0.411867520083741 NA promoter-TSS (NM_001159593) promoter-TSS (NM_001159593) -787 NM_015747 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_91_84_-0.173592613914691_6.32259462918036_0.411711322860738-4 chr9 123464674 123465716 + 0.411711322860738 NA Intergenic Intergenic -13506 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak2_90_84_-0.189248691681703_6.31476659029685_0.411711322860738 chr1 106406963 106407862 + 0.411711322860738 NA Intergenic Intergenic 139219 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_102_75_0.149659851614642_6.32275743925091_0.411711322860738 chr12 9030012 9031078 + 0.411711322860738 NA intron (NM_029321, intron 1 of 2) intron (NM_029321, intron 1 of 2) 548 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding common_peak2_91_84_-0.173592613914691_6.32259462918036_0.411711322860738-2 chr10 128923204 128924066 + 0.411711322860738 NA promoter-TSS (NM_015740) promoter-TSS (NM_015740) -111 NM_015740 14533 Mm.30118 NM_015740 ENSMUSG00000090247 Bloc1s1 AI839753|BLOS1|Gcn5l1 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding common_peak2_90_84_-0.189248691681703_6.31476659029685_0.411711322860738-2 chr2 35229066 35230358 + 0.411711322860738 NA Intergenic Intergenic -26647 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_91_84_-0.173592613914691_6.32259462918036_0.411711322860738 chr5 73255521 73256474 + 0.411711322860738 NA intron (NM_028194, intron 1 of 62) CpG 621 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_91_84_-0.173592613914691_6.32259462918036_0.411711322860738 chr1 136624982 136626138 + 0.411711322860738 NA exon (NM_177643, exon 2 of 2) exon (NM_177643, exon 2 of 2) 659 NM_001160251 226442 Mm.62521 NM_177643 ENSMUSG00000041483 Zfp281 Znf281 zinc finger protein 281 protein-coding common_peak2_91_84_-0.173592613914691_6.32259462918036_0.411711322860738-3 chr5 31048310 31049109 + 0.411711322860738 NA promoter-TSS (NM_177870) promoter-TSS (NM_177870) 69 NM_027855 381629 Mm.28144 NM_027855 ENSMUSG00000013622 Atraid 0610007C21Rik|AI316792|Apr3|HSPC013|p18 all-trans retinoic acid induced differentiation factor protein-coding common_peak2_71_67_-0.202806572150878_5.9860595551749_0.41140123235455-3 chr17 56583943 56584556 + 0.41140123235455 NA promoter-TSS (NM_001163300) promoter-TSS (NM_001163300) 336 NM_001029979 224902 Mm.214973 NM_001029979 ENSMUSG00000042625 Safb2 AA389433|AI255170|mKIAA0138 scaffold attachment factor B2 protein-coding common_peak2_71_67_-0.202806572150878_5.9860595551749_0.41140123235455-2 chr13 104467264 104467999 + 0.41140123235455 NA intron (NR_136938, intron 23 of 26) intron (NR_136938, intron 23 of 26) 179796 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_71_67_-0.202806572150878_5.9860595551749_0.41140123235455 chr12 80230180 80230923 + 0.41140123235455 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 29820 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_71_67_-0.202806572150878_5.9860595551749_0.41140123235455-2 chr2 112492555 112493616 + 0.41140123235455 NA exon (NM_028844, exon 1 of 6) exon (NM_028844, exon 1 of 6) 121 NM_028844 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak2_71_67_-0.202806572150878_5.9860595551749_0.41140123235455-5 chr7 30562184 30563066 + 0.41140123235455 NA promoter-TSS (NM_170760) promoter-TSS (NM_170760) 559 NM_025498 66340 Mm.86557 NM_025498 ENSMUSG00000036835 Psenen 1700023M09Rik|Pen-2 presenilin enhancer gamma secretase subunit protein-coding common_peak1_71_67_-0.202806572150878_5.9860595551749_0.41140123235455 chr1 179042308 179042870 + 0.41140123235455 NA intron (NM_027188, intron 10 of 11) intron (NM_027188, intron 10 of 11) 475452 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak2_71_67_-0.202806572150878_5.9860595551749_0.41140123235455-4 chr4 47352191 47352935 + 0.41140123235455 NA promoter-TSS (NM_009370) promoter-TSS (NM_009370) -659 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak2_81_59_0.164068971991919_5.98892508160448_0.411401232354538 chr1 90603036 90603980 + 0.411401232354538 NA promoter-TSS (NM_133805) promoter-TSS (NM_133805) 83 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak1_81_59_0.164068971991919_5.98892508160448_0.411401232354538-2 chr10 21790612 21791857 + 0.411401232354538 NA Intergenic Intergenic -90950 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_81_59_0.164068971991919_5.98892508160448_0.411401232354538 chr1 23921641 23922250 + 0.411401232354538 NA intron (NM_001357395, intron 1 of 10) CpG 436 NM_001357395 98366 Mm.329963 NM_028534 ENSMUSG00000026155 Smap1 1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175 small ArfGAP 1 protein-coding common_peak1_81_59_0.164068971991919_5.98892508160448_0.411401232354538-3 chr18 80206865 80207767 + 0.411401232354538 NA exon (NM_178604, exon 2 of 4) exon (NM_178604, exon 2 of 4) 449 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding common_peak2_227_200_-0.115162593552815_7.59347039440252_0.411315475991854 chr8 123040794 123042209 + 0.411315475991854 NA intron (NM_001081379, intron 1 of 12) CpG 783 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_181_136_0.115055181922228_7.15555967392164_0.411165607679114 chr8 83608206 83609493 + 0.411165607679114 NA intron (NM_001308227, intron 1 of 2) intron (NM_001308227, intron 1 of 2) 301 NM_001308227 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_180_136_0.1071625070976_7.15161333650933_0.411165607679114 chr19 44758839 44760807 + 0.411165607679114 NA intron (NM_011037, intron 1 of 9) intron (NM_011037, intron 1 of 9) 2429 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_152_114_0.118957031273743_6.90496856658125_0.411005311115473 chr8 126844172 126846445 + 0.411005311115473 NA Intergenic Intergenic -3712 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_54_52_-0.22908815321226_5.61337637795707_0.410818340144431-5 chr9 34977787 34978722 + 0.410818340144431 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -138474 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_54_52_-0.22908815321226_5.61337637795707_0.410818340144431 chr11 121747269 121748000 + 0.410818340144431 NA Intergenic Intergenic 45207 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_54_52_-0.22908815321226_5.61337637795707_0.410818340144431-2 chr3 100162547 100163047 + 0.410818340144431 NA promoter-TSS (NM_175552) promoter-TSS (NM_175552) 334 NR_104341 14547 Mm.279228 NM_010269 ENSMUSG00000027865 Gdap2 C77050|D3Ertd801e ganglioside-induced differentiation-associated-protein 2 protein-coding common_peak2_54_52_-0.22908815321226_5.61337637795707_0.410818340144431-4 chr7 16272630 16273255 + 0.410818340144431 NA exon (NM_001136270, exon 1 of 1) exon (NM_001136270, exon 1 of 1) 750 NM_001136270 66300 Mm.218698 NM_001136270 ENSMUSG00000091811 Inafm1 2610014I16Rik|Prr24 InaF motif containing 1 protein-coding common_peak2_54_52_-0.22908815321226_5.61337637795707_0.410818340144431-6 chr9 69397991 69398359 + 0.410818340144431 NA intron (NM_145618, intron 1 of 15) CpG 177 NM_145618 93697 Mm.35911 NM_145618 ENSMUSG00000032235 Ice2 B230343B06Rik|Narg2 interactor of little elongation complex ELL subunit 2 protein-coding common_peak2_54_52_-0.22908815321226_5.61337637795707_0.410818340144431-3 chr4 133887549 133888274 + 0.410818340144431 NA promoter-TSS (NM_001285505) promoter-TSS (NM_001285505) -114 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_54_52_-0.22908815321226_5.61337637795707_0.410818340144431 chr11 17257673 17258320 + 0.410818340144431 NA 5' UTR (NM_001330649, exon 1 of 5) 5' UTR (NM_001330649, exon 1 of 5) 308 NM_001330649 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding common_peak1_62_45_0.169808342189821_5.60846612715192_0.410818340144418-3 chr14 20153993 20154863 + 0.410818340144418 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 27354 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_62_45_0.169808342189821_5.60846612715192_0.410818340144418 chr11 51940236 51940689 + 0.410818340144418 NA Intergenic Intergenic -27169 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_62_45_0.169808342189821_5.60846612715192_0.410818340144418-2 chr11 51940262 51940706 + 0.410818340144418 NA Intergenic Intergenic -27147 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak2_62_45_0.169808342189821_5.60846612715192_0.410818340144418-3 chr6 108531738 108532481 + 0.410818340144418 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 42366 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_62_45_0.169808342189821_5.60846612715192_0.410818340144418 chr10 18995635 18996322 + 0.410818340144418 NA Intergenic Intergenic 15985 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_62_45_0.169808342189821_5.60846612715192_0.410818340144418-2 chr5 31629434 31629856 + 0.410818340144418 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 15694 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_126_94_0.127784013242968_6.63374761495243_0.410746990793969 chr9 120571496 120572526 + 0.410746990793969 NA intron (NM_025974, intron 1 of 5) intron (NM_025974, intron 1 of 5) 494 NM_025974 67115 Mm.289810 NM_025974 ENSMUSG00000025794 Rpl14 3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14 ribosomal protein L14 protein-coding common_peak2_114_104_-0.158790296689234_6.63485036932151_0.41074699079392 chr1 135844897 135846022 + 0.41074699079392 NA intron (NM_001130175, intron 3 of 13) intron (NM_001130175, intron 3 of 13) 4598 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding common_peak2_579_491_-0.0691095239278265_8.90795974337533_0.410517980851692 chr15 38931536 38935891 + 0.410517980851692 NA promoter-TSS (NM_080640) promoter-TSS (NM_080640) -196 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_92_85_-0.174979612921861_6.33877494824117_0.410334955492133 chr2 121413476 121414570 + 0.410334955492133 NA promoter-TSS (NM_153075) promoter-TSS (NM_153075) 121 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding common_peak1_103_76_0.144641674613723_6.33910737800176_0.410334955492133 chr11 53300725 53301347 + 0.410334955492133 NA promoter-TSS (NM_008300) promoter-TSS (NM_008300) -557 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak1_103_76_0.144641674613723_6.33910737800176_0.410334955492133-2 chr18 50065187 50066592 + 0.410334955492133 NA intron (NM_134131, intron 1 of 1) intron (NM_134131, intron 1 of 1) -12227 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak1_92_85_-0.174979612921861_6.33877494824117_0.410334955492133 chr8 122556476 122557343 + 0.410334955492133 NA Intergenic Intergenic -5580 NM_001357349 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_92_85_-0.174979612921861_6.33877494824117_0.410334955492133-2 chr4 103119081 103120167 + 0.410334955492133 NA intron (NM_001039081, intron 1 of 12) CpG 234 NM_001039081 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak1_92_85_-0.174979612921861_6.33877494824117_0.410334955492133-2 chr9 56418396 56419985 + 0.410334955492133 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 571 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_230_202_-0.110720842359777_7.60997549600529_0.41018385407181 chr1 133130861 133133147 + 0.41018385407181 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 838 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak2_153_115_0.115798477470373_6.91588023386276_0.410092015618445 chr19 40255361 40256779 + 0.410092015618445 NA intron (NM_016861, intron 1 of 6) ID_B1|SINE|B4 15546 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_140_126_-0.1412427608159_6.91806330636422_0.410092015618445 chr1 38987080 38988682 + 0.410092015618445 NA promoter-TSS (NM_026850) promoter-TSS (NM_026850) 67 NM_026850 68833 Mm.28121 NM_026850 ENSMUSG00000026078 Pdcl3 1110061A19Rik|C80025|Viaf1 phosducin-like 3 protein-coding common_peak2_153_115_0.115798477470373_6.91588023386276_0.410092015618445-2 chr3 69722069 69723264 + 0.410092015618445 NA intron (NM_133787, intron 2 of 15) CpG-9222 611 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding common_peak1_198_175_-0.118423266289345_7.40021998549262_0.409952816792356 chr8 23255299 23256987 + 0.409952816792356 NA intron (NM_020585, intron 1 of 4) intron (NM_020585, intron 1 of 4) 937 NM_020585 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-12 chr6 145973185 145973395 + 0.409888142029227 NA Intergenic Intergenic 39168 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-17 chr5 32745609 32745886 + 0.409888142029227 NA intron (NM_001347332, intron 1 of 8) intron (NM_001347332, intron 1 of 8) 595 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-6 chr17 23856400 23856798 + 0.409888142029227 NA intron (NM_027220, intron 3 of 4) intron (NM_027220, intron 3 of 4) 2827 NM_027220 69814 Mm.244143 NM_027220 ENSMUSG00000048992 Prss32 2010001P08Rik|mT5|tryptase-5 protease, serine 32 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-18 chr5 125261954 125262229 + 0.409888142029227 NA Intergenic Intergenic 79003 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-13 chrX 74313159 74313589 + 0.409888142029227 NA intron (NM_138607, intron 1 of 12) CpG 341 NM_138607 108160 Mm.4370 NM_138607 ENSMUSG00000001962 Fam50a D0HXS9928E|XAP-5 family with sequence similarity 50, member A protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-20 chr6 48841680 48841973 + 0.409888142029227 NA promoter-TSS (NM_001164209) promoter-TSS (NM_001164209) 170 NM_001098271 66058 Mm.27061 NM_025326 ENSMUSG00000023367 Tmem176a 0610011I04Rik|AU040201|AU041743|Keg2 transmembrane protein 176A protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-7 chr17 17845908 17846146 + 0.409888142029227 NA intron (NM_008215, intron 4 of 4) intron (NM_008215, intron 4 of 4) 9161 NM_008215 15116 Mm.255701 NM_008215 ENSMUSG00000003665 Has1 HAS hyaluronan synthase 1 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-14 chr2 180070742 180071170 + 0.409888142029227 NA TTS (NM_178750) TTS (NM_178750) 363 NM_001083329 52856 Mm.219658 NM_028422 ENSMUSG00000039069 Mtg2 1810011P19Rik|2900056P18Rik|D2Bwg0647e|Gtpbp5 mitochondrial ribosome associated GTPase 2 protein-coding unique_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227 chr19 17285940 17286418 + 0.409888142029227 NA Intergenic Intergenic 53326 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-11 chr18 60751241 60751667 + 0.409888142029227 NA Intergenic Intergenic -2789 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-2 chr1 138537414 138537644 + 0.409888142029227 NA intron (NM_021605, intron 3 of 9) intron (NM_021605, intron 3 of 9) 82228 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-3 chr10 7955238 7955518 + 0.409888142029227 NA intron (NM_138667, intron 1 of 6) CpG 745 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-5 chr15 99401530 99401748 + 0.409888142029227 NA exon (NM_026669, exon 2 of 10) exon (NM_026669, exon 2 of 10) 8420 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227 chr1 171469961 171470353 + 0.409888142029227 NA Intergenic ID_B1|SINE|B4 32596 NM_172647 16456 Mm.294882 NM_172647 ENSMUSG00000038235 F11r 9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106 F11 receptor protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-22 chr6 91441141 91441476 + 0.409888142029227 NA promoter-TSS (NR_045980) promoter-TSS (NR_045980) 321 NR_038153 69798 Mm.229265 NR_038153 ENSMUSG00000100680 1810044D09Rik - RIKEN cDNA 1810044D09 gene ncRNA common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-4 chr19 53481837 53482211 + 0.409888142029227 NA Intergenic Intergenic -17228 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-5 chr16 90142720 90143084 + 0.409888142029227 NA non-coding (NR_033476, exon 1 of 1) non-coding (NR_033476, exon 1 of 1) 665 NR_033476 100038709 Mm.484070 NR_033476 Gm10789 - predicted gene 10789 ncRNA common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-7 chr16 6963269 6963475 + 0.409888142029227 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -75998 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-10 chr4 145238000 145238271 + 0.409888142029227 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 8735 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227 chr1 191062523 191062832 + 0.409888142029227 NA promoter-TSS (NM_198654) promoter-TSS (NM_198654) 233 NM_001357166 68972 Mm.237188 NM_026895 ENSMUSG00000026632 Tatdn3 1500010M24Rik TatD DNase domain containing 3 protein-coding common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-7 chr6 112870824 112871084 + 0.409888142029227 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 76312 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-14 chr9 51058334 51058835 + 0.409888142029227 NA intron (NM_001033534, intron 7 of 7) intron (NM_001033534, intron 7 of 7) 18510 NM_001033534 244864 Mm.335152 NM_001033534 ENSMUSG00000060594 Layn E030012M19Rik|Gm511 layilin protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-15 chr3 130730669 130730938 + 0.409888142029227 NA promoter-TSS (NM_026724) promoter-TSS (NM_026724) -405 NM_001005859 68436 Mm.140568 NM_026724 ENSMUSG00000062006 Rpl34 1100001I22Rik ribosomal protein L34 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-11 chr3 97298185 97298533 + 0.409888142029227 NA Intergenic Intergenic -70995 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-2 chr1 131691131 131691387 + 0.409888142029227 NA intron (NM_145509, intron 1 of 5) intron (NM_145509, intron 1 of 5) 2564 NM_145509 226421 Mm.44508 NM_145509 ENSMUSG00000052688 Rab7b 5430435G22Rik RAB7B, member RAS oncogene family protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-8 chr16 23497963 23498187 + 0.409888142029227 NA intron (NM_001359083, intron 2 of 10) intron (NM_001359083, intron 2 of 10) 22740 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-7 chr18 60992529 60992832 + 0.409888142029227 NA Intergenic Intergenic 21519 NM_201353 240332 Mm.39846 NM_201353 ENSMUSG00000052026 Slc6a7 AW455934|PROT solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-2 chr11 4273971 4274390 + 0.409888142029227 NA Intergenic Intergenic 7384 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-14 chr8 94434601 94434900 + 0.409888142029227 NA intron (NR_015514, intron 1 of 2) intron (NR_015514, intron 1 of 2) 353 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-3 chr13 67194575 67194890 + 0.409888142029227 NA intron (NM_001048204, intron 1 of 3) intron (NM_001048204, intron 1 of 3) 226 NM_001048204 218311 Mm.82396 NM_183156 ENSMUSG00000051037 Zfp455 3732412P20Rik|Rslcan-10 zinc finger protein 455 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-16 chrX 142833993 142834354 + 0.409888142029227 NA intron (NR_152447, intron 6 of 8) intron (NR_152447, intron 6 of 8) 95173 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA unique_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227 chr11 35969092 35969559 + 0.409888142029227 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 10764 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-6 chr2 141587079 141587281 + 0.409888142029227 NA intron (NM_001013802, intron 6 of 18) intron (NM_001013802, intron 6 of 18) -915704 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-9 chr4 141929172 141929557 + 0.409888142029227 NA intron (NM_177868, intron 17 of 31) intron (NM_177868, intron 17 of 31) -53628 NR_040672 545691 Mm.332015 NR_040672 ENSMUSG00000085424 Fhad1os1 Gm13037 forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1 ncRNA common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-16 chr4 89528876 89529369 + 0.409888142029227 NA Intergenic Intergenic -159076 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-9 chr2 84519132 84519435 + 0.409888142029227 NA Intergenic Intergenic -12410 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-13 chr18 77773512 77773829 + 0.409888142029227 NA promoter-TSS (NM_007505) promoter-TSS (NM_007505) -49 NM_001357533 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-5 chr11 101003357 101003715 + 0.409888142029227 NA Intergenic Intergenic -5916 NM_016920 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-5 chr13 73327930 73328414 + 0.409888142029227 NA intron (NM_010888, intron 1 of 3) intron (NM_010888, intron 1 of 3) 310 NR_033306 407785 Mm.29897 NM_010888 ENSMUSG00000021606 Ndufs6 BC059730|IP13 NADH dehydrogenase (ubiquinone) Fe-S protein 6 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-13 chr8 77488145 77488386 + 0.409888142029227 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -28791 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-8 chr17 80127668 80127981 + 0.409888142029227 NA exon (NM_176963, exon 1 of 7) exon (NM_176963, exon 1 of 7) 353 NM_176963 319625 Mm.29098 NM_176963 ENSMUSG00000035473 Galm A530057M15Rik|AU015645|AU020959 galactose mutarotase protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-12 chr9 40320750 40321011 + 0.409888142029227 NA 5' UTR (NM_001357622, exon 1 of 17) 5' UTR (NM_001357622, exon 1 of 17) 443 NM_001357622 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-10 chr18 54175008 54175295 + 0.409888142029227 NA Intergenic Intergenic -247144 NR_040338 77433 Mm.159919 NR_040338 Redrum 9430076G02Rik Redrum, erythroid developmental long intergenic non-protein coding transcript ncRNA common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-2 chr16 15195780 15195991 + 0.409888142029227 NA Intergenic Intergenic 289239 NM_025769 66793 Mm.100270 NM_025769 ENSMUSG00000068617 Efcab1 4930449A16Rik|5430404L10Rik EF-hand calcium binding domain 1 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-12 chr8 111554638 111555226 + 0.409888142029227 NA intron (NM_001168623, intron 1 of 4) B2_Mm1a|SINE|B2 16589 NM_001168623 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-10 chr6 91729503 91729724 + 0.409888142029227 NA intron (NM_009320, intron 5 of 14) intron (NM_009320, intron 5 of 14) 45546 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-8 chr2 137414301 137414631 + 0.409888142029227 NA Intergenic Intergenic -297946 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-3 chr14 21087869 21088180 + 0.409888142029227 NA intron (NM_001243041, intron 1 of 10) intron (NM_001243041, intron 1 of 10) 11872 NM_001243041 11534 Mm.188734 NM_134079 ENSMUSG00000039197 Adk 2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak adenosine kinase protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-5 chr15 80816311 80816571 + 0.409888142029227 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 17831 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-4 chr15 37443982 37444261 + 0.409888142029227 NA intron (NM_001359845, intron 4 of 6) intron (NM_001359845, intron 4 of 6) -11457 NR_045283 100503538 Mm.445166 NR_045283 ENSMUSG00000086992 Gm15941 - predicted gene 15941 ncRNA unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227 chr1 170729421 170729862 + 0.409888142029227 NA intron (NM_001081304, intron 15 of 15) intron (NM_001081304, intron 15 of 15) 85109 NM_177068 320078 Mm.287131 NM_177068 ENSMUSG00000038463 Olfml2b 1110018N05Rik|4832415H08Rik|AI467542 olfactomedin-like 2B protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-4 chr12 27304688 27305128 + 0.409888142029227 NA Intergenic Intergenic 37810 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-25 chr7 49499953 49500262 + 0.409888142029227 NA intron (NM_175272, intron 11 of 37) intron (NM_175272, intron 11 of 37) 136728 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227 chr13 119144277 119144691 + 0.409888142029227 NA Intergenic Intergenic 264527 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-6 chr15 22732624 22732983 + 0.409888142029227 NA Intergenic Intergenic -17819 NM_001165971 545091 Mm.475598 NM_001165971 Hnrnpa1l2-ps2 EG545091|Gm5803 heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-7 chr19 60040391 60040694 + 0.409888142029227 NA Intergenic Intergenic -96888 NM_001164367 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-13 chr9 23567456 23567827 + 0.409888142029227 NA Intergenic Intergenic 344565 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-8 chr7 144025164 144025398 + 0.409888142029227 NA Intergenic Intergenic 16027 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-12 chr8 105515005 105515214 + 0.409888142029227 NA Intergenic Intergenic -3637 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-3 chr10 79532987 79533205 + 0.409888142029227 NA intron (NM_001302389, intron 1 of 5) intron (NM_001302389, intron 1 of 5) 691 NM_001302442 50784 Mm.28873 NM_015817 ENSMUSG00000052151 Plpp2 Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c phospholipid phosphatase 2 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-26 chr7 110003369 110003569 + 0.409888142029227 NA intron (NR_037959, intron 2 of 2) ID_B1|SINE|B4 3177 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227 chr1 88543536 88543791 + 0.409888142029227 NA Intergenic Intergenic -7854 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-8 chr2 122377638 122377859 + 0.409888142029227 NA Intergenic Intergenic -8830 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding unique_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-2 chr4 129032112 129032343 + 0.409888142029227 NA Intergenic Intergenic -26044 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-8 chr2 90564807 90565104 + 0.409888142029227 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 15692 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-19 chr6 15731130 15731397 + 0.409888142029227 NA intron (NM_175088, intron 2 of 4) intron (NM_175088, intron 2 of 4) 10602 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-3 chr10 78338392 78338691 + 0.409888142029227 NA intron (NM_053014, intron 1 of 9) intron (NM_053014, intron 1 of 9) 1666 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA unique_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-2 chr14 57571107 57571452 + 0.409888142029227 NA promoter-TSS (NR_152103) promoter-TSS (NR_152103) 290 NM_026526 68043 Mm.45225 NM_026526 ENSMUSG00000021951 Eef1akmt1 2510005D08Rik|AW045965|Ayu21-96|Gt(pU21)96Imeg|GtAyu21-96|N6amt2 EEF1A alpha lysine methyltransferase 1 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-21 chr6 88965958 88966228 + 0.409888142029227 NA Intergenic Intergenic 63842 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-15 chr8 105533802 105534022 + 0.409888142029227 NA intron (NM_013477, intron 2 of 7) intron (NM_013477, intron 2 of 7) 15166 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227 chr1 135374442 135374773 + 0.409888142029227 NA intron (NM_175259, intron 1 of 4) intron (NM_175259, intron 1 of 4) 456 NM_175259 77552 Mm.41407 NM_175259 ENSMUSG00000041889 Shisa4 9330132O05Rik|Tmem58|mShisa4 shisa family member 4 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-9 chr4 65242419 65242654 + 0.409888142029227 NA intron (NM_021362, intron 9 of 21) intron (NM_021362, intron 9 of 21) 118362 NM_021362 18491 Mm.317854 NM_021362 ENSMUSG00000028370 Pappa 8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A pregnancy-associated plasma protein A protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-12 chr18 68192306 68192589 + 0.409888142029227 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -35499 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-27 chr9 41491331 41491609 + 0.409888142029227 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) 16577 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA unique_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-5 chr3 96113340 96113751 + 0.409888142029227 NA intron (NM_001025613, intron 2 of 12) intron (NM_001025613, intron 2 of 12) 9018 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-11 chr7 127244038 127244274 + 0.409888142029227 NA promoter-TSS (NM_177362) promoter-TSS (NM_177362) -370 NM_177362 244216 Mm.41038 NM_177362 ENSMUSG00000054716 Zfp771 G630024C07Rik|Znf771 zinc finger protein 771 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-4 chr11 76480305 76480592 + 0.409888142029227 NA intron (NM_001346670, intron 2 of 21) intron (NM_001346670, intron 2 of 21) -11983 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-6 chr14 73235080 73235614 + 0.409888142029227 NA intron (NM_009029, intron 17 of 26) intron (NM_009029, intron 17 of 26) -2544 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-23 chr7 3333074 3333344 + 0.409888142029227 NA intron (NM_133189, intron 1 of 5) intron (NM_133189, intron 1 of 5) 254 NM_133189 81904 Mm.214994 NM_133189 ENSMUSG00000069806 Cacng7 - calcium channel, voltage-dependent, gamma subunit 7 protein-coding common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-3 chr17 42911480 42911745 + 0.409888142029227 NA Intergenic Intergenic -35188 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-11 chr7 127912603 127912879 + 0.409888142029227 NA promoter-TSS (NM_001360699) promoter-TSS (NM_001360699) 224 NM_026370 67773 Mm.425492 NM_026370 ENSMUSG00000030801 Kat8 2010203C02Rik|5830450F21Rik|D7Ertd629e|MOF|MYST-1|Myst1 K(lysine) acetyltransferase 8 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-4 chr15 56842616 56843097 + 0.409888142029227 NA Intergenic Intergenic -148310 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-4 chr2 113448312 113448590 + 0.409888142029227 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 7387 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-10 chr5 36224068 36224557 + 0.409888142029227 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) 20291 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-6 chr19 16371271 16371620 + 0.409888142029227 NA intron (NM_008139, intron 5 of 6) B1_Mus1|SINE|Alu -56441 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-6 chr17 35821186 35821402 + 0.409888142029227 NA promoter-TSS (NM_133662) promoter-TSS (NM_133662) -419 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-10 chr3 96421571 96421861 + 0.409888142029227 NA Intergenic Intergenic -6883 NR_001579 21748 NR_001579 ENSMUSG00000064796 Terc mTER|mTR telomerase RNA component ncRNA common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-2 chr10 78338390 78338616 + 0.409888142029227 NA intron (NM_053014, intron 1 of 9) intron (NM_053014, intron 1 of 9) 1704 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-9 chr17 26638195 26638717 + 0.409888142029227 NA intron (NM_026170, intron 7 of 9) intron (NM_026170, intron 7 of 9) -37940 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-24 chr7 27804924 27805323 + 0.409888142029227 NA Intergenic Intergenic -2073 NM_027703 71163 Mm.440493 NM_027703 ENSMUSG00000030604 Zfp626 4833408D11Rik|4933426I21Rik|7630402I04Rik zinc finger protein 626 protein-coding common_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-9 chr6 49096961 49097298 + 0.409888142029227 NA intron (NM_023670, intron 10 of 14) intron (NM_023670, intron 10 of 14) 23334 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-2 chr12 91305117 91305597 + 0.409888142029227 NA intron (NM_181815, intron 10 of 25) intron (NM_181815, intron 10 of 25) 79052 NM_181815 75216 Mm.312204 NM_181815 ENSMUSG00000061533 Cep128 4930534B04Rik|5430424K18Rik|AI449708|AI480494|E230024F20 centrosomal protein 128 protein-coding unique_peak1_21_14_0.279339786561786_4.04656048888941_0.409888142029227-11 chr8 109197258 109197552 + 0.409888142029227 NA intron (NR_126329, intron 5 of 9) intron (NR_126329, intron 5 of 9) 52340 NR_151498 105243282 Mm.203332 NR_151498 4922502B01Rik 2900056M07Rik RIKEN cDNA 4922502B01 gene ncRNA common_peak1_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-5 chr2 74578602 74578871 + 0.409888142029227 NA intron (NM_001110209, intron 1 of 13) CpG 212 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding unique_peak2_21_14_0.279339786561786_4.04656048888941_0.409888142029227-3 chr18 35848403 35848630 + 0.409888142029227 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) -6171 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-4 chr10 15300395 15300703 + 0.409888142029227 NA Intergenic Intergenic -491228 NR_131087 77538 Mm.128235 NR_131087 ENSMUSG00000112227 C330004P14Rik - RIKEN cDNA C330004P14 gene ncRNA unique_peak2_16_18_-0.431041676533889_4.03240667517664_0.409888142029227-7 chr2 68983791 68984102 + 0.409888142029227 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 122505 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_39_39_-0.279286131488933_5.1822850291429_0.409729630423047-3 chr2 161108462 161108947 + 0.409729630423047 NA intron (NR_126509, intron 1 of 35) CpG 382 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047 chr1 60565992 60566631 + 0.409729630423047 NA intron (NM_001045513, intron 1 of 13) CpG 454 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak2_39_39_-0.279286131488933_5.1822850291429_0.409729630423047 chr1 150393493 150393945 + 0.409729630423047 NA promoter-TSS (NM_145511) promoter-TSS (NM_145511) -639 NM_001357579 226499 Mm.222093 NM_145511 ENSMUSG00000006010 BC003331 1810053E15Rik|Odr4|odr-4 cDNA sequence BC003331 protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-7 chr7 133098259 133098940 + 0.409729630423047 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -16739 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-8 chr9 65884667 65885445 + 0.409729630423047 NA 5' UTR (NM_019797, exon 4 of 16) 5' UTR (NM_019797, exon 4 of 16) 117 NM_001170907 56404 Mm.208379 NM_019797 ENSMUSG00000032386 Trip4 4930558E03Rik|ASC-1|Asc1|BB191711 thyroid hormone receptor interactor 4 protein-coding common_peak1_39_39_-0.279286131488933_5.1822850291429_0.409729630423047-4 chr5 74172461 74173206 + 0.409729630423047 NA Intergenic Intergenic -22493 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-3 chr17 35994323 35994924 + 0.409729630423047 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 119 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047 chr10 128092844 128093296 + 0.409729630423047 NA intron (NM_054078, intron 1 of 29) CpG 287 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047-7 chrX 143345188 143345682 + 0.409729630423047 NA intron (NM_001358592, intron 4 of 11) intron (NM_001358592, intron 4 of 11) 48827 NM_001358592 83453 Mm.157697 NM_031258 ENSMUSG00000031283 Chrdl1 CHL|CHL1|Nrln1|VOPT chordin-like 1 protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-2 chr16 24449567 24450056 + 0.409729630423047 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 1720 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-4 chr2 11777840 11778359 + 0.409729630423047 NA promoter-TSS (NM_001348237) promoter-TSS (NM_001348237) 346 NM_177268 320816 Mm.260201 NM_177268 ENSMUSG00000047909 Ankrd16 2810455F06Rik|AI646698|D430029B21Rik ankyrin repeat domain 16 protein-coding common_peak1_39_39_-0.279286131488933_5.1822850291429_0.409729630423047-2 chr2 73910919 73911268 + 0.409729630423047 NA intron (NM_001301722, intron 1 of 4) CpG-8181 233 NM_175015 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding common_peak2_39_39_-0.279286131488933_5.1822850291429_0.409729630423047-2 chr10 80930134 80930589 + 0.409729630423047 NA intron (NM_008655, intron 1 of 3) CpG 270 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-5 chr4 34551222 34551569 + 0.409729630423047 NA intron (NM_001007589, intron 1 of 4) intron (NM_001007589, intron 1 of 4) 780 NM_001007589 433693 Mm.389532 NM_026019 ENSMUSG00000028291 Akirin2 2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2 akirin 2 protein-coding common_peak2_39_39_-0.279286131488933_5.1822850291429_0.409729630423047-3 chr8 86289511 86290005 + 0.409729630423047 NA Intergenic Intergenic 276832 NM_172912 244562 Mm.67485 NM_172912 ENSMUSG00000036872 Abcc12 4930467B22Rik|MRP9 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047-6 chr8 86874134 86874776 + 0.409729630423047 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 10803 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_46_33_0.186198462051715_5.1805620722762_0.409729630423047-6 chr5 36714515 36714790 + 0.409729630423047 NA Intergenic Intergenic -18631 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047-5 chr16 15637618 15638237 + 0.409729630423047 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) 61 NM_011159 19090 Mm.71 NM_011159 ENSMUSG00000022672 Prkdc AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip protein kinase, DNA activated, catalytic polypeptide protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047-4 chr15 83167177 83167650 + 0.409729630423047 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 4795 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_39_39_-0.279286131488933_5.1822850291429_0.409729630423047 chr1 82596922 82597317 + 0.409729630423047 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 10198 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding unique_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047 chr16 87713507 87714531 + 0.409729630423047 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 15065 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047-3 chr15 36283388 36283658 + 0.409729630423047 NA promoter-TSS (NM_013923) promoter-TSS (NM_013923) -376 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_46_33_0.186198462051715_5.1805620722762_0.409729630423047-2 chr11 57092074 57092846 + 0.409729630423047 NA intron (NM_008165, intron 2 of 15) intron (NM_008165, intron 2 of 15) 79414 NM_001252403 14799 Mm.4920 NM_008165 ENSMUSG00000020524 Gria1 2900051M01Rik|Glr-1|Glr1|GluA1|GluR-A|GluRA|Glur-1|Glur1|HIPA1|gluR-K1 glutamate receptor, ionotropic, AMPA1 (alpha 1) protein-coding common_peak1_82_60_0.157586283328031_6.0095304792269_0.409674412769142 chr1 127239094 127240037 + 0.409674412769142 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 34579 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_82_60_0.157586283328031_6.0095304792269_0.409674412769142-3 chr9 41950823 41951796 + 0.409674412769142 NA Intergenic Intergenic 125904 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_82_60_0.157586283328031_6.0095304792269_0.409674412769142-2 chr8 9977458 9978311 + 0.409674412769142 NA 5' UTR (NM_026868, exon 1 of 3) 5' UTR (NM_026868, exon 1 of 3) 167 NM_026868 68904 Mm.142570 NM_026868 ENSMUSG00000040396 Abhd13 1110065L07Rik|AI463703|AI788994 abhydrolase domain containing 13 protein-coding common_peak1_72_68_-0.204109021212243_6.00646994617205_0.409674412769129-2 chr5 137075465 137076394 + 0.409674412769129 NA Intergenic Intergenic -3657 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak1_72_68_-0.204109021212243_6.00646994617205_0.409674412769129 chr5 121204546 121205115 + 0.409674412769129 NA intron (NM_011290, intron 1 of 6) CpG 329 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak2_72_68_-0.204109021212243_6.00646994617205_0.409674412769129 chr17 4993643 4994507 + 0.409674412769129 NA promoter-TSS (NM_001085355) promoter-TSS (NM_001085355) -999 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_72_68_-0.204109021212243_6.00646994617205_0.409674412769129-2 chr18 67245021 67245812 + 0.409674412769129 NA 5' UTR (NM_001357518, exon 1 of 11) 5' UTR (NM_001357518, exon 1 of 11) 414 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 Pgap5 metallophosphoesterase 1 protein-coding common_peak1_128_95_0.135060652142487_6.6524928267924_0.409648900448052-2 chr8 13869230 13870436 + 0.409648900448052 NA intron (NM_181854, intron 1 of 1) CpG 192 NM_181854 101994 Mm.289346 NM_181854 ENSMUSG00000047710 Champ1 AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802 chromosome alignment maintaining phosphoprotein 1 protein-coding common_peak1_128_95_0.135060652142487_6.6524928267924_0.409648900448052 chr18 75000478 75001401 + 0.409648900448052 NA promoter-TSS (NR_028552).2 promoter-TSS (NR_028552).2 -129 NR_028552 100217457 NR_028552 ENSMUSG00000064871 Snord58b MBII-199 small nucleolar RNA, C/D box 58B snoRNA common_peak1_127_95_0.123912604776907_6.64691880310961_0.409648900448052 chr6 85348386 85349363 + 0.409648900448052 NA exon (NM_177466, exon 2 of 5) exon (NM_177466, exon 2 of 5) -12501 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA common_peak2_115_105_-0.160062412759177_6.64788924818361_0.409648900448003 chr17 88629396 88630596 + 0.409648900448003 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 3441 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_154_116_0.112686739150011_6.92670808915841_0.409193769350563 chr16 45838352 45840348 + 0.409193769350563 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 5028 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_232_204_-0.112515664951119_7.62322226702989_0.409075223917172 chr1 93478143 93480400 + 0.409075223917172 NA promoter-TSS (NM_133808) promoter-TSS (NM_133808) 210 NM_001159719 18000 Mm.428652 NM_010891 ENSMUSG00000026276 Sept2 AW208991|Nedd-5|Nedd5|mKIAA0158 septin 2 protein-coding common_peak1_93_86_-0.176337172119918_6.35477490978877_0.408992416275689-2 chr2 148185093 148185957 + 0.408992416275689 NA Intergenic Intergenic -138556 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak1_93_86_-0.176337172119918_6.35477490978877_0.408992416275689 chr15 80711392 80712447 + 0.408992416275689 NA intron (NM_144812, intron 1 of 24) CpG 606 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_93_86_-0.176337172119918_6.35477490978877_0.408992416275689 chr6 117879164 117880265 + 0.408992416275689 NA Intergenic CpG 16833 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding common_peak2_200_177_-0.120399790671799_7.4155335356305_0.408674506501976 chr11 16752064 16753627 + 0.408674506501976 NA intron (NM_207655, intron 1 of 27) CpG 642 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_55_53_-0.230243387944788_5.63976580819107_0.408596647434913-5 chr6 83053526 83054082 + 0.408596647434913 NA promoter-TSS (NM_007517) promoter-TSS (NM_007517) -717 NM_007517 11993 Mm.386752 NM_007517 ENSMUSG00000068328 Aup1 AA589454 ancient ubiquitous protein 1 protein-coding common_peak2_63_46_0.16134123339367_5.63525946837447_0.408596647434913-3 chr19 44284454 44285022 + 0.408596647434913 NA Intergenic Intergenic -8938 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_64_46_0.18355124195811_5.64636447265669_0.408596647434913-2 chr4 156188369 156188894 + 0.408596647434913 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 8857 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_63_46_0.16134123339367_5.63525946837447_0.408596647434913 chr14 76521591 76522185 + 0.408596647434913 NA Intergenic Intergenic -1033 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_63_46_0.16134123339367_5.63525946837447_0.408596647434913-3 chr2 31442153 31442546 + 0.408596647434913 NA Intergenic Intergenic -27921 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak1_64_46_0.18355124195811_5.64636447265669_0.408596647434913-3 chr2 93045391 93046433 + 0.408596647434913 NA intron (NM_001177536, intron 1 of 6) CpG 232 NM_001177536 100042784 Mm.102816 NM_001177536 ENSMUSG00000075028 Prdm11 8030443D09Rik|AA163972|Gm707 PR domain containing 11 protein-coding common_peak2_63_46_0.16134123339367_5.63525946837447_0.408596647434913-2 chr19 3929009 3929997 + 0.408596647434913 NA intron (NM_026316, intron 1 of 9) intron (NM_026316, intron 1 of 9) 213 NM_026316 67689 Mm.109341 NM_026316 ENSMUSG00000024885 Aldh3b1 1700001N19Rik|ALDH4|ALDH7 aldehyde dehydrogenase 3 family, member B1 protein-coding common_peak2_55_53_-0.230243387944788_5.63976580819107_0.408596647434913-4 chr4 150008167 150009047 + 0.408596647434913 NA intron (NM_173371, intron 1 of 4) CpG 416 NM_173371 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_64_46_0.18355124195811_5.64636447265669_0.408596647434913 chr3 121703153 121703988 + 0.408596647434913 NA Intergenic Intergenic -19967 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_55_53_-0.230243387944788_5.63976580819107_0.408596647434913 chr14 20893435 20894001 + 0.408596647434913 NA Intergenic Intergenic -35680 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_63_46_0.16134123339367_5.63525946837447_0.408596647434913-5 chr9 88719597 88720356 + 0.408596647434913 NA promoter-TSS (NM_001128601) promoter-TSS (NM_001128601) -178 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding common_peak2_55_53_-0.230243387944788_5.63976580819107_0.408596647434913-6 chr8 106528219 106529050 + 0.408596647434913 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 17782 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_64_46_0.18355124195811_5.64636447265669_0.408596647434913-4 chr4 138325742 138326307 + 0.408596647434913 NA exon (NM_026880, exon 1 of 8) exon (NM_026880, exon 1 of 8) 272 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak1_55_53_-0.230243387944788_5.63976580819107_0.408596647434913 chr2 127336164 127337001 + 0.408596647434913 NA exon (NM_010090, exon 1 of 4) exon (NM_010090, exon 1 of 4) 423 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_63_46_0.16134123339367_5.63525946837447_0.408596647434913-5 chr4 119118913 119119585 + 0.408596647434913 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 10504 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_64_46_0.18355124195811_5.64636447265669_0.408596647434913 chr2 119675097 119675598 + 0.408596647434913 NA intron (NM_030112, intron 1 of 17) CpG 279 NM_030112 76246 Mm.33437 NM_030112 ENSMUSG00000027304 Rtf1 2900005O08Rik|6530416A09Rik|AI853581|AU043144|AW553985|Gtl7|cbp82 RTF1, Paf1/RNA polymerase II complex component protein-coding common_peak1_64_46_0.18355124195811_5.64636447265669_0.408596647434913-2 chr19 47050446 47050908 + 0.408596647434913 NA exon (NM_027654, exon 1 of 10) exon (NM_027654, exon 1 of 10) 229 NM_001360632 71041 Mm.35413 NM_027654 ENSMUSG00000025050 Pcgf6 4933407A11Rik|AI604840|MBLR|Rnf134 polycomb group ring finger 6 protein-coding common_peak1_64_46_0.18355124195811_5.64636447265669_0.408596647434913-5 chrX 71816346 71817182 + 0.408596647434913 NA promoter-TSS (NM_001290780) promoter-TSS (NM_001290780) 6 NM_001290780 67048 Mm.41102 NM_001081356 ENSMUSG00000073131 Vma21 2610030H06Rik|AI840175 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) protein-coding common_peak2_63_46_0.16134123339367_5.63525946837447_0.408596647434913 chr11 116107514 116108251 + 0.408596647434913 NA exon (NM_172570, exon 3 of 6) exon (NM_172570, exon 3 of 6) 2353 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak2_55_53_-0.230243387944788_5.63976580819107_0.408596647434913-3 chr2 117881020 117881710 + 0.408596647434913 NA intron (NR_040631, intron 3 of 5) MTD|LTR|ERVL-MaLR 59437 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_63_46_0.16134123339367_5.63525946837447_0.408596647434913-4 chr2 164517980 164518692 + 0.408596647434913 NA Intergenic Intergenic 20811 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_64_46_0.18355124195811_5.64636447265669_0.408596647434913 chr16 13780662 13781370 + 0.408596647434913 NA intron (NM_001039521, intron 1 of 17) intron (NM_001039521, intron 1 of 17) 317 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding common_peak2_64_46_0.18355124195811_5.64636447265669_0.408596647434913-3 chr8 70700906 70701714 + 0.408596647434913 NA TTS (NM_010592) TTS (NM_010592) 3571 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak1_63_46_0.16134123339367_5.63525946837447_0.408596647434913-6 chr4 156188411 156188880 + 0.408596647434913 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 8843 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_63_46_0.16134123339367_5.63525946837447_0.408596647434913-2 chr18 36448244 36449163 + 0.408596647434913 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 5792 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_63_46_0.16134123339367_5.63525946837447_0.408596647434913-4 chr3 108200603 108201225 + 0.408596647434913 NA promoter-TSS (NM_028061) promoter-TSS (NM_028061) -80 NM_001081320 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding common_peak2_55_53_-0.230243387944788_5.63976580819107_0.408596647434913-2 chr2 25982353 25983086 + 0.408596647434913 NA intron (NM_001276360, intron 1 of 17) CpG 563 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak2_129_96_0.131172271875376_6.66549897812482_0.408572581434327 chr11 100618846 100620520 + 0.408572581434327 NA 5' UTR (NM_019795, exon 1 of 14) 5' UTR (NM_019795, exon 1 of 14) 485 NM_019795 56354 Mm.402409 NM_019795 ENSMUSG00000014195 Dnajc7 2010003F24Rik|2010004G07Rik|CCRP|Ttc2|mDj11|mTpr2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding common_peak2_156_117_0.118774261662565_6.94203018019312_0.408310203256911 chr13 46726665 46727955 + 0.408310203256911 NA intron (NM_175749, intron 1 of 21) CpG 539 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak2_156_117_0.118774261662565_6.94203018019312_0.408310203256911-3 chr6 135065625 135067092 + 0.408310203256911 NA intron (NM_181444, intron 1 of 3) intron (NM_181444, intron 1 of 3) 696 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak2_156_117_0.118774261662565_6.94203018019312_0.408310203256911-2 chr15 53131018 53132379 + 0.408310203256911 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 214485 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_156_117_0.118774261662565_6.94203018019312_0.408310203256911-4 chr8 61223977 61225124 + 0.408310203256911 NA intron (NM_021506, intron 1 of 11) CpG 379 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak1_83_61_0.151283406059261_6.02983801341651_0.40800082862019 chr1 181841522 181842347 + 0.40800082862019 NA intron (NM_133815, intron 1 of 13) CpG 467 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_83_61_0.151283406059261_6.02983801341651_0.40800082862019 chr12 40222719 40223163 + 0.40800082862019 NA promoter-TSS (NR_035459) promoter-TSS (NR_035459) -130 NR_035459 100316693 NR_035459 ENSMUSG00000089371 Mir1938 mir-1938|mmu-mir-1938 microRNA 1938 ncRNA common_peak1_83_61_0.151283406059261_6.02983801341651_0.40800082862019-2 chr2 26351044 26352010 + 0.40800082862019 NA TTS (NM_001037747) TTS (NM_001037747) 583 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak2_73_69_-0.205377255460768_6.02659438921458_0.408000828620178 chr7 112377695 112378493 + 0.408000828620178 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 9786 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_73_69_-0.205377255460768_6.02659438921458_0.408000828620178 chr8 105304091 105305145 + 0.408000828620178 NA promoter-TSS (NM_172760) promoter-TSS (NM_172760) -983 NM_172760 234683 Mm.237966 NM_172760 ENSMUSG00000014791 Elmo3 9930107J06|BC058752|CED-12|Ced12 engulfment and cell motility 3 protein-coding common_peak2_73_69_-0.205377255460768_6.02659438921458_0.408000828620178-2 chr8 105304062 105305127 + 0.408000828620178 NA exon (NM_148952, exon 10 of 10) exon (NM_148952, exon 10 of 10) -1007 NM_172760 234683 Mm.237966 NM_172760 ENSMUSG00000014791 Elmo3 9930107J06|BC058752|CED-12|Ced12 engulfment and cell motility 3 protein-coding common_peak1_105_78_0.134934327519513_6.37124791193686_0.407682472603649 chr4 119124446 119125902 + 0.407682472603649 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 16429 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_94_87_-0.177666244911516_6.37059849618154_0.407682472603649 chr6 6173764 6174564 + 0.407682472603649 NA intron (NM_001177572, intron 3 of 17) intron (NM_001177572, intron 3 of 17) 43009 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak2_105_78_0.134934327519513_6.37124791193686_0.407682472603649 chr11 20632064 20633151 + 0.407682472603649 NA intron (NM_001038625, intron 1 of 1) intron (NM_001038625, intron 1 of 1) 630 NM_001038625 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-5 chr2 71644504 71644910 + 0.407645899519042 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -74710 NR_037979 381371 Mm.330284 NM_201366 ENSMUSG00000064263 Platr26 Gm1631 pluripotency associated transcript 26 ncRNA common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-10 chr4 58413922 58414389 + 0.407645899519042 NA Intergenic Intergenic 26943 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-2 chr10 91157908 91158288 + 0.407645899519042 NA intron (NM_001080129, intron 4 of 8) intron (NM_001080129, intron 4 of 8) 12452 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-7 chr15 75270543 75271098 + 0.407645899519042 NA intron (NM_008530, intron 3 of 3) B4|SINE|B4 2399 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-17 chr8 111933425 111933734 + 0.407645899519042 NA intron (NM_001357348, intron 1 of 7) CpG-14527 234 NM_001357348 234740 Mm.87513 NM_001033321 ENSMUSG00000031951 Tmem231 4932417I16Rik|Gm178 transmembrane protein 231 protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-6 chr5 112277947 112278345 + 0.407645899519042 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 1455 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-5 chr12 84284860 84285233 + 0.407645899519042 NA promoter-TSS (NM_029880) promoter-TSS (NM_029880) -250 NM_029880 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding unique_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-4 chr7 29248704 29249137 + 0.407645899519042 NA promoter-TSS (NM_028179) promoter-TSS (NM_028179) -453 NM_028179 72275 Mm.441142 NM_028179 ENSMUSG00000030587 2200002D01Rik 2010005J02Rik|H2RSP|IMUP|IMUP-1|IMUP-2 RIKEN cDNA 2200002D01 gene protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-4 chr19 42045836 42046102 + 0.407645899519042 NA TTS (NM_020033) TTS (NM_020033) 118 NM_026152 67432 Mm.24196 NM_026152 ENSMUSG00000025176 Hoga1 0610010D20Rik|Dhdpsl|Npl2 4-hydroxy-2-oxoglutarate aldolase 1 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-18 chr9 64017579 64017905 + 0.407645899519042 NA intron (NM_008542, intron 1 of 3) intron (NM_008542, intron 1 of 3) 4317 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-2 chr10 86103344 86103983 + 0.407645899519042 NA intron (NR_038024, intron 1 of 2) B2_Mm1t|SINE|B2 7809 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-10 chr6 38534866 38535307 + 0.407645899519042 NA intron (NM_025363, intron 1 of 1) intron (NM_025363, intron 1 of 1) 225 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-15 chr7 84335861 84336418 + 0.407645899519042 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 73899 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-7 chr5 137294684 137295140 + 0.407645899519042 NA TTS (NM_031405) TTS (NM_031405) 243 NM_027356 70240 Mm.124666 NM_027356 ENSMUSG00000051502 Ufsp1 2700038N03Rik|D5Ertd655e UFM1-specific peptidase 1 protein-coding common_peak1_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-5 chr7 19149934 19150403 + 0.407645899519042 NA promoter-TSS (NM_026111) promoter-TSS (NM_026111) 330 NM_026943 107686 Mm.29135 NM_026943 ENSMUSG00000040824 Snrpd2 1810009A06Rik|SMD2 small nuclear ribonucleoprotein D2 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-9 chr4 54772844 54773440 + 0.407645899519042 NA Intergenic Intergenic -174803 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-3 chr11 79961717 79962301 + 0.407645899519042 NA intron (NM_144826, intron 1 of 18) intron (NM_144826, intron 1 of 18) 378 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-11 chr7 127014034 127014454 + 0.407645899519042 NA TTS (NM_030240) TTS (NM_030240) 350 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-4 chr13 64369859 64370217 + 0.407645899519042 NA intron (NM_009984, intron 1 of 7) CpG 482 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-16 chr7 141539319 141539743 + 0.407645899519042 NA intron (NM_026522, intron 1 of 10) intron (NM_026522, intron 1 of 10) 326 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042 chr1 133019629 133020194 + 0.407645899519042 NA intron (NM_008575, intron 1 of 11) B1_Mus1|SINE|Alu 5505 NR_126506 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-3 chr12 98735085 98735658 + 0.407645899519042 NA promoter-TSS (NM_011877) promoter-TSS (NM_011877) -726 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-12 chr9 50900348 50900805 + 0.407645899519042 NA intron (NM_178710, intron 9 of 15) intron (NM_178710, intron 9 of 15) 43652 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-13 chr5 137350289 137351108 + 0.407645899519042 NA intron (NM_010144, intron 1 of 16) intron (NM_010144, intron 1 of 16) 589 NM_010144 13846 Mm.34533 NM_010144 ENSMUSG00000029710 Ephb4 AI042935|Htk|MDK2|Myk1|Tyro11|b2b2412Clo Eph receptor B4 protein-coding unique_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-5 chr9 63966490 63967144 + 0.407645899519042 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 55242 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_27_28_-0.326281901335647_4.69484004445975_0.407645899519042 chr16 91011236 91011645 + 0.407645899519042 NA promoter-TSS (NM_001164483) promoter-TSS (NM_001164483) -132 NM_001164483 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-11 chr6 57703076 57703358 + 0.407645899519042 NA exon (NM_133737, exon 1 of 9) exon (NM_133737, exon 1 of 9) 762 NM_133737 71835 Mm.274904 NM_133737 ENSMUSG00000062190 Lancl2 1700003F10Rik LanC (bacterial lantibiotic synthetase component C)-like 2 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042 chr1 157518557 157518902 + 0.407645899519042 NA intron (NM_033354, intron 2 of 27) intron (NM_033354, intron 2 of 27) -7006 NR_151610 102632813 Mm.420137 NR_151610 Gm15486 - predicted gene 15486 ncRNA common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-4 chr11 98959220 98959542 + 0.407645899519042 NA intron (NM_009024, intron 2 of 8) intron (NM_009024, intron 2 of 8) -1090 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-2 chr11 74484263 74484793 + 0.407645899519042 NA intron (NM_001015046, intron 3 of 24) intron (NM_001015046, intron 3 of 24) 105630 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-13 chr9 13498166 13498630 + 0.407645899519042 NA Intergenic Intergenic 67037 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-9 chr3 108880624 108880965 + 0.407645899519042 NA intron (NM_177091, intron 4 of 12) intron (NM_177091, intron 4 of 12) 9214 NM_177091 320181 Mm.244233 NM_177091 ENSMUSG00000045326 Fndc7 E230011A21Rik fibronectin type III domain containing 7 protein-coding common_peak1_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-2 chr11 106998985 106999425 + 0.407645899519042 NA intron (NM_010655, intron 1 of 10) CpG 320 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-9 chr6 34609763 34609972 + 0.407645899519042 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 11363 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-14 chr5 149678187 149678495 + 0.407645899519042 NA promoter-TSS (NM_001081204) promoter-TSS (NM_001081204) 84 NM_001081204 381694 Mm.45060 NM_001081204 ENSMUSG00000051950 B3glct B3galtl|Gm1057 beta-3-glucosyltransferase protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042 chr1 171378400 171378767 + 0.407645899519042 NA intron (NM_001122680, intron 1 of 7) intron (NM_001122680, intron 1 of 7) 8410 NM_001122680 71740 Mm.263414 NM_027893 ENSMUSG00000006411 Nectin4 1200017F15Rik|Prr4|Pvrl4 nectin cell adhesion molecule 4 protein-coding unique_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042 chr11 49081377 49081885 + 0.407645899519042 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) 5044 NM_001271677 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-4 chr5 146705879 146706122 + 0.407645899519042 NA Intergenic Intergenic 88956 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding unique_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042 chr13 51327871 51328376 + 0.407645899519042 NA Intergenic Intergenic -80495 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-11 chr4 150708424 150708823 + 0.407645899519042 NA Intergenic Intergenic -56449 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-8 chr5 142964422 142964797 + 0.407645899519042 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 4254 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-6 chr15 62118215 62118578 + 0.407645899519042 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 79139 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-3 chr5 77374865 77375150 + 0.407645899519042 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 33038 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-8 chr16 45799354 45799724 + 0.407645899519042 NA intron (NM_153412, intron 5 of 17) intron (NM_153412, intron 5 of 17) 44839 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-8 chr2 125472295 125472726 + 0.407645899519042 NA intron (NM_007993, intron 4 of 65) intron (NM_007993, intron 4 of 65) 33928 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding unique_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-3 chr5 145201350 145201848 + 0.407645899519042 NA exon (NM_023322, exon 1 of 3) exon (NM_023322, exon 1 of 3) 283 NM_023322 67235 Mm.432480 NM_023322 ENSMUSG00000029627 Zkscan14 2310046C23Rik|2810437E14Rik|Zfp99|Znf394 zinc finger with KRAB and SCAN domains 14 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-10 chr4 114602165 114602674 + 0.407645899519042 NA intron (NM_001085549, intron 5 of 6) intron (NM_001085549, intron 5 of 6) 195695 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-12 chr5 77374791 77375133 + 0.407645899519042 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 33083 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-6 chr16 16896765 16897281 + 0.407645899519042 NA intron (NM_176833, intron 1 of 7) intron (NM_176833, intron 1 of 7) 554 NM_176833 68606 Mm.230296 NM_176833 ENSMUSG00000026181 Ppm1f 1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015 protein phosphatase 1F (PP2C domain containing) protein-coding unique_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-2 chr12 12972298 12972969 + 0.407645899519042 NA Intergenic Intergenic -30797 NM_008709 18109 Mm.16469 NM_008709 ENSMUSG00000037169 Mycn N-myc|Nmyc|Nmyc-1|Nmyc1|bHLHe37|c-nmyc v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived protein-coding common_peak2_27_28_-0.326281901335647_4.69484004445975_0.407645899519042-5 chr13 107022689 107023025 + 0.407645899519042 NA promoter-TSS (NM_001145779) promoter-TSS (NM_001145779) 287 NR_015471 100040322 Mm.133867 NR_015471 ENSMUSG00000071181 3830408C21Rik - RIKEN cDNA 3830408C21 gene ncRNA common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-12 chr6 71987653 71988074 + 0.407645899519042 NA Intergenic Intergenic 54665 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak2_33_23_0.224868356615295_4.6973966790288_0.407645899519042-3 chr11 17468311 17468715 + 0.407645899519042 NA Intergenic Intergenic 210825 NM_001330649 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding common_peak1_33_23_0.224868356615295_4.6973966790288_0.407645899519042-7 chr19 11966146 11966470 + 0.407645899519042 NA intron (NM_001033174, intron 1 of 13) CpG 464 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_27_28_-0.326281901335647_4.69484004445975_0.407645899519042 chr1 36470941 36471370 + 0.407645899519042 NA promoter-TSS (NM_033570) promoter-TSS (NM_033570) -442 NM_033570 94220 Mm.422638 NM_033570 ENSMUSG00000037408 Cnnm4 5430430O18Rik|Acdp4 cyclin M4 protein-coding common_peak2_130_97_0.127352464327182_6.6783860762788_0.407517392375985 chr11 97781561 97782357 + 0.407517392375985 NA promoter-TSS (NR_028078) promoter-TSS (NR_028078) -193 NR_028078 100302498 Mm.453536 NR_028078 ENSMUSG00000064901 Snora21 MBI-3 small nucleolar RNA, H/ACA box 21 snoRNA common_peak2_130_97_0.127352464327182_6.6783860762788_0.407517392375985-2 chr4 152008996 152010499 + 0.407517392375985 NA exon (NM_001033352, exon 1 of 4) exon (NM_001033352, exon 1 of 4) 856 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding common_peak1_130_97_0.127352464327182_6.6783860762788_0.407517392375985 chr4 122886229 122887272 + 0.407517392375985 NA promoter-TSS (NM_001358036) promoter-TSS (NM_001358036) -674 NM_001358036 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak2_118_107_-0.15045257482613_6.6796612147504_0.407517392375985 chr10 4105859 4107285 + 0.407517392375985 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 106548 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak2_236_207_-0.109091429211605_7.64589400353529_0.407453878153905 chr17 14336122 14339161 + 0.407453878153905 NA intron (NM_022315, intron 3 of 12) intron (NM_022315, intron 3 of 12) 58135 NM_022315 64074 Mm.30162 NM_022315 ENSMUSG00000023886 Smoc2 1700056C05Rik|5430426J21Rik|Smoc2l SPARC related modular calcium binding 2 protein-coding common_peak1_254_193_0.0963005569841684_7.64806312067921_0.407453878153905 chr18 36514125 36515734 + 0.407453878153905 NA intron (NM_010415, intron 2 of 5) intron (NM_010415, intron 2 of 5) 876 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_144_129_-0.134852872470552_6.95494137679318_0.407440960255861-2 chr5 115011274 115012788 + 0.407440960255861 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 507 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_144_129_-0.134852872470552_6.95494137679318_0.407440960255861 chr10 42761605 42762998 + 0.407440960255861 NA intron (NM_001359285, intron 1 of 19) CpG 805 NM_153055 140740 Mm.214344 NM_153055 ENSMUSG00000019802 Sec63 5730478J10Rik|AI649014|AW319215 SEC63-like (S. cerevisiae) protein-coding common_peak1_143_129_-0.144766523502238_6.94998455127734_0.407440960255861 chr2 118110470 118111724 + 0.407440960255861 NA promoter-TSS (NM_011580) promoter-TSS (NM_011580) 105 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak1_374_287_0.0787564025448422_8.20930320271473_0.407230011971969 chr11 69408757 69411773 + 0.407230011971969 NA intron (NM_001017426, intron 1 of 22) CpG 3410 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak2_220_167_0.0989016056485212_7.44176822560302_0.406812338873764 chr13 17803203 17805311 + 0.406812338873764 NA exon (NM_001081058, exon 1 of 14) exon (NM_001081058, exon 1 of 14) 840 NM_001081058 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493-7 chr8 111449270 111449764 + 0.406785247261493 NA promoter-TSS (NR_105819) promoter-TSS (NR_105819) -683 NR_105819 common_peak2_48_34_0.204075126421088_5.23132058015551_0.406785247261493-2 chr11 59838468 59839184 + 0.406785247261493 NA intron (NM_011991, intron 1 of 11) intron (NM_011991, intron 1 of 11) 941 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding unique_peak1_48_34_0.204075126421088_5.23132058015551_0.406785247261493 chr17 33940449 33941117 + 0.406785247261493 NA promoter-TSS (NM_020603) promoter-TSS (NM_020603) 60 NM_020603 57315 Mm.2437 NM_020603 ENSMUSG00000024312 Wdr46 2310007I04Rik|Bing4|C78447|C78559 WD repeat domain 46 protein-coding common_peak1_47_34_0.174537649927039_5.21655184190849_0.406785247261493-2 chr19 8756574 8756927 + 0.406785247261493 NA promoter-TSS (NM_001276704) promoter-TSS (NM_001276704) 219 NR_132423 102640359 Mm.440831 NR_132423 1700023D09Rik AV208457 RIKEN cDNA 1700023D09 gene ncRNA common_peak2_48_34_0.204075126421088_5.23132058015551_0.406785247261493-5 chr7 16044218 16044724 + 0.406785247261493 NA Intergenic Intergenic -27374 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_48_34_0.204075126421088_5.23132058015551_0.406785247261493-4 chr19 46500225 46500605 + 0.406785247261493 NA Intergenic CpG -1233 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_48_34_0.204075126421088_5.23132058015551_0.406785247261493 chr10 80938622 80939171 + 0.406785247261493 NA Intergenic Intergenic 8805 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493 chr1 157519199 157519864 + 0.406785247261493 NA intron (NM_033354, intron 2 of 27) intron (NM_033354, intron 2 of 27) -6639 NM_001159986 89867 Mm.87114 NM_033354 ENSMUSG00000026589 Sec16b Lztr2|Rgpr|Rgpr-p117 SEC16 homolog B (S. cerevisiae) protein-coding common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493-2 chr11 22287493 22288028 + 0.406785247261493 NA promoter-TSS (NM_153078) promoter-TSS (NM_153078) -965 NM_001252515 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding common_peak1_47_34_0.174537649927039_5.21655184190849_0.406785247261493 chr14 76742691 76743217 + 0.406785247261493 NA Intergenic Intergenic -17177 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_48_34_0.204075126421088_5.23132058015551_0.406785247261493 chr19 46622648 46623175 + 0.406785247261493 NA promoter-TSS (NM_001177813) promoter-TSS (NM_001177813) -490 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493-3 chr15 84281017 84281584 + 0.406785247261493 NA intron (NM_133167, intron 3 of 12) intron (NM_133167, intron 3 of 12) -43420 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding common_peak2_48_34_0.204075126421088_5.23132058015551_0.406785247261493-6 chr9 102625581 102626062 + 0.406785247261493 NA promoter-TSS (NM_181394) promoter-TSS (NM_181394) 303 NM_001301689 28135 Mm.38910 NM_001081122 ENSMUSG00000032534 Cep63 4921501M07|AL450317.13gm1|AW107703|CD20R|D9Mgc41|D9Mgc48e|ET2 centrosomal protein 63 protein-coding unique_peak1_47_34_0.174537649927039_5.21655184190849_0.406785247261493 chr2 30981149 30981839 + 0.406785247261493 NA promoter-TSS (NM_028846) promoter-TSS (NM_028846) 447 NM_144885 227707 Mm.235238 NM_144885 ENSMUSG00000026851 BC005624 - cDNA sequence BC005624 protein-coding common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493-4 chr16 31948053 31948426 + 0.406785247261493 NA promoter-TSS (NM_026554) promoter-TSS (NM_026554) 282 NR_027897 106264 Mm.347369 NM_025320 ENSMUSG00000107002 0610012G03Rik AI839730 RIKEN cDNA 0610012G03 gene ncRNA common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493-5 chr2 25054341 25054878 + 0.406785247261493 NA TTS (NM_146251) TTS (NM_146251) 230 NM_001177655 56876 Mm.42956 NM_020276 ENSMUSG00000006476 Nsmf Jacob|Nelf NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding common_peak1_47_34_0.174537649927039_5.21655184190849_0.406785247261493-3 chr19 53407972 53408392 + 0.406785247261493 NA Intergenic Intergenic -17548 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_48_34_0.204075126421088_5.23132058015551_0.406785247261493-3 chr15 100422605 100422959 + 0.406785247261493 NA promoter-TSS (NR_040351) promoter-TSS (NR_040351) 273 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak2_47_34_0.174537649927039_5.21655184190849_0.406785247261493-6 chr6 13677266 13677883 + 0.406785247261493 NA intron (NM_175312, intron 1 of 4) CpG 392 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-5 chr19 4334283 4334640 + 0.406785247261486 NA intron (NM_001001984, intron 12 of 20) intron (NM_001001984, intron 12 of 20) -28239 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486 chr1 89456781 89457103 + 0.406785247261486 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 2131 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-7 chr2 161108574 161109022 + 0.406785247261486 NA intron (NR_126509, intron 1 of 35) CpG 288 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak1_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-2 chr17 45747238 45747532 + 0.406785247261486 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 12879 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_40_40_-0.279537457444402_5.21778327589588_0.406785247261486 chr12 70706644 70707465 + 0.406785247261486 NA Intergenic Intergenic -118460 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-4 chr4 57560322 57560770 + 0.406785247261486 NA Intergenic Intergenic -7702 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-9 chr4 132328876 132329455 + 0.406785247261486 NA intron (NM_027925, intron 1 of 8) B1F|SINE|Alu 373 NM_027925 71787 Mm.239183 NM_027925 ENSMUSG00000028898 Trnau1ap 1110007F05Rik|AA387999|Secp43|Trspap1|WI1-2643G14.2 tRNA selenocysteine 1 associated protein 1 protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-2 chr10 127195133 127195620 + 0.406785247261486 NA non-coding (NR_045715, exon 1 of 4) non-coding (NR_045715, exon 1 of 4) 127 NR_045716 100038591 Mm.441071 NR_045715 ENSMUSG00000097331 F420014N23Rik - RIKEN cDNA F420014N23 gene ncRNA common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-8 chr4 45458067 45458828 + 0.406785247261486 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -49681 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-4 chr15 31367115 31367774 + 0.406785247261486 NA 5' UTR (NM_026153, exon 1 of 2) 5' UTR (NM_026153, exon 1 of 2) 315 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak1_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-5 chr7 24529925 24530405 + 0.406785247261486 NA promoter-TSS (NM_153134) promoter-TSS (NM_153134) -483 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding common_peak1_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-6 chr7 90342716 90343520 + 0.406785247261486 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 40763 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-6 chr19 4928490 4928964 + 0.406785247261486 NA promoter-TSS (NM_133803) promoter-TSS (NM_133803) -440 NM_133803 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak1_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-3 chr2 84550285 84550596 + 0.406785247261486 NA Intergenic Intergenic -43567 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_40_40_-0.279537457444402_5.21778327589588_0.406785247261486-3 chr13 92610428 92610897 + 0.406785247261486 NA promoter-TSS (NM_172588) promoter-TSS (NM_172588) -476 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding common_peak2_145_130_-0.136062545544767_6.96539172876507_0.406585694756923 chr19 5770418 5771373 + 0.406585694756923 NA intron (NR_155264, intron 1 of 15) intron (NR_155264, intron 1 of 15) 524 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding common_peak1_131_98_0.12359940517166_6.69115632266544_0.40648271685358 chr5 124353152 124354595 + 0.40648271685358 NA intron (NM_013812, intron 1 of 3) CpG 755 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak2_131_98_0.12359940517166_6.69115632266544_0.40648271685358 chr13 97241287 97242476 + 0.40648271685358 NA intron (NM_007930, intron 1 of 2) CpG 776 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak2_65_47_0.175048504103358_5.67248675277284_0.406463159098199-3 chr2 91068440 91068996 + 0.406463159098199 NA exon (NM_026721, exon 2 of 10) exon (NM_026721, exon 2 of 10) 1597 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding unique_peak1_56_54_-0.231360656752059_5.66567938514863_0.406463159098199 chr8 128463541 128464496 + 0.406463159098199 NA intron (NM_001358959, intron 8 of 16) intron (NM_001358959, intron 8 of 16) 104777 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_65_47_0.175048504103358_5.67248675277284_0.406463159098199-2 chr16 62786443 62787191 + 0.406463159098199 NA promoter-TSS (NM_178925) promoter-TSS (NM_178925) -101 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak2_56_54_-0.231360656752059_5.66567938514863_0.406463159098199-3 chr6 48047246 48047856 + 0.406463159098199 NA intron (NM_001081382, intron 1 of 5) CpG 243 NM_001347139 72306 Mm.381553 NM_001081382 ENSMUSG00000071477 Zfp777 2500002G23Rik zinc finger protein 777 protein-coding common_peak1_56_54_-0.231360656752059_5.66567938514863_0.406463159098199 chr10 82699172 82699988 + 0.406463159098199 NA intron (NM_001081218, intron 1 of 14) CpG 573 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838|fkls host cell factor C2 protein-coding common_peak2_56_54_-0.231360656752059_5.66567938514863_0.406463159098199-2 chr19 6974447 6974895 + 0.406463159098199 NA promoter-TSS (NM_008889) promoter-TSS (NM_008889) -377 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak2_65_47_0.175048504103358_5.67248675277284_0.406463159098199-4 chr5 92934143 92935355 + 0.406463159098199 NA intron (NM_001077596, intron 3 of 9) intron (NM_001077596, intron 3 of 9) 36756 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_56_54_-0.231360656752059_5.66567938514863_0.406463159098199-3 chr7 5051408 5052108 + 0.406463159098199 NA intron (NM_026900, intron 1 of 1) CpG 226 NM_026900 68992 Mm.41484 NM_026900 ENSMUSG00000055633 Zfp580 1500015O20Rik|AI838225|Znf580 zinc finger protein 580 protein-coding common_peak1_65_47_0.175048504103358_5.67248675277284_0.406463159098199-2 chr7 139212646 139213196 + 0.406463159098199 NA promoter-TSS (NM_027164) promoter-TSS (NM_027164) -67 NM_027164 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding common_peak1_56_54_-0.231360656752059_5.66567938514863_0.406463159098199-4 chr8 123805947 123806608 + 0.406463159098199 NA intron (NM_009003, intron 1 of 7) CpG 281 NM_009003 19341 Mm.9221 NM_009003 ENSMUSG00000019478 Rab4a AI848268|Rab4 RAB4A, member RAS oncogene family protein-coding common_peak1_65_47_0.175048504103358_5.67248675277284_0.406463159098199 chr12 69184258 69185033 + 0.406463159098199 NA promoter-TSS (NM_025589) promoter-TSS (NM_025589) 487 NM_146035 217664 Mm.206642 NM_146035 ENSMUSG00000043998 Mgat2 AA407964|CDGS2|GLCNACTII|GNT-II|GNT2 mannoside acetylglucosaminyltransferase 2 protein-coding common_peak2_65_47_0.175048504103358_5.67248675277284_0.406463159098199 chr15 76193258 76193760 + 0.406463159098199 NA intron (NM_201394, intron 3 of 31) intron (NM_201394, intron 3 of 31) 2201 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_56_54_-0.231360656752059_5.66567938514863_0.406463159098199 chr15 73243750 73244386 + 0.406463159098199 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 10814 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak1_56_54_-0.231360656752059_5.66567938514863_0.406463159098199-2 chr2 79635570 79636150 + 0.406463159098199 NA intron (NM_080558, intron 1 of 17) CpG 435 NM_080558 70599 Mm.272881 NM_080558 ENSMUSG00000027007 Ssfa2 5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927 sperm specific antigen 2 protein-coding common_peak1_95_88_-0.178967743667635_6.38624955913258_0.406403951062135-2 chr13 33934998 33936364 + 0.406403951062135 NA promoter-TSS (NR_040707) promoter-TSS (NR_040707) -351 NR_040707 68808 Mm.443347 NR_040707 ENSMUSG00000085457 1110046J04Rik - RIKEN cDNA 1110046J04 gene ncRNA common_peak2_106_79_0.130237942141796_6.38704706595826_0.406403951062135 chr4 135872682 135873885 + 0.406403951062135 NA intron (NM_026383, intron 1 of 2) intron (NM_026383, intron 1 of 2) 563 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak1_95_88_-0.178967743667635_6.38624955913258_0.406403951062135 chr11 35877943 35879290 + 0.406403951062135 NA intron (NM_170779, intron 9 of 22) MER5A|DNA|hAT-Charlie -44088 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak2_96_88_-0.16412287655532_6.39367199268874_0.406403951062135-2 chr8 95806836 95807429 + 0.406403951062135 NA non-coding (NR_015574, exon 1 of 4) non-coding (NR_015574, exon 1 of 4) 302 NR_015574 319960 Mm.386996 NR_015574 ENSMUSG00000074136 4930513N10Rik - RIKEN cDNA 4930513N10 gene ncRNA common_peak2_96_88_-0.16412287655532_6.39367199268874_0.406403951062135 chr15 44619247 44620174 + 0.406403951062135 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) 69 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak1_107_79_0.143563776439552_6.39370998310714_0.406403951062135 chr4 127021378 127022387 + 0.406403951062135 NA non-coding (NR_045010, exon 1 of 12) non-coding (NR_045010, exon 1 of 12) 581 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak2_107_79_0.143563776439552_6.39370998310714_0.406403951062135 chr10 13965887 13967193 + 0.406403951062135 NA 5' UTR (NM_010437, exon 1 of 9) 5' UTR (NM_010437, exon 1 of 9) 161 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_106_79_0.130237942141796_6.38704706595826_0.406403951062135 chr19 4440588 4441787 + 0.406403951062135 NA intron (NR_045989, intron 1 of 4) intron (NR_045989, intron 1 of 4) 1628 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak2_107_79_0.143563776439552_6.39370998310714_0.406403951062135-2 chr15 99074279 99074798 + 0.406403951062135 NA promoter-TSS (NM_030159) promoter-TSS (NM_030159) 131 NR_155351 102637490 Mm.421289 NR_155351 ENSMUSG00000116371 Gm34284 - predicted gene, 34284 ncRNA common_peak1_106_79_0.130237942141796_6.38704706595826_0.406403951062135-2 chr7 114116749 114117750 + 0.406403951062135 NA intron (NM_025846, intron 1 of 5) CpG 532 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_75_70_-0.18763864453278_6.05592779723829_0.406378054027074-4 chr4 133659672 133660502 + 0.406378054027074 NA Intergenic Intergenic 12560 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak2_75_70_-0.18763864453278_6.05592779723829_0.406378054027074-3 chr2 126875349 126876215 + 0.406378054027074 NA intron (NM_001164325, intron 1 of 38) CpG 479 NM_001164325 58800 Mm.244705 NM_021450 ENSMUSG00000027365 Trpm7 2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK transient receptor potential cation channel, subfamily M, member 7 protein-coding common_peak2_75_70_-0.18763864453278_6.05592779723829_0.406378054027074 chr14 47298283 47298711 + 0.406378054027074 NA intron (NM_178684, intron 1 of 3) CpG 223 NM_001360542 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak2_75_70_-0.18763864453278_6.05592779723829_0.406378054027074-2 chr15 76715384 76716241 + 0.406378054027074 NA TTS (NM_145471) TTS (NM_145471) 5171 NM_001358893 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding common_peak1_75_70_-0.18763864453278_6.05592779723829_0.406378054027074-2 chr2 38545416 38546282 + 0.406378054027074 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 33973 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_75_70_-0.18763864453278_6.05592779723829_0.406378054027074 chr15 89314579 89315227 + 0.406378054027074 NA intron (NM_001081030, intron 1 of 39) CpG 408 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_74_70_-0.206612655124919_6.04644079194222_0.406378054027074 chr2 117911085 117912106 + 0.406378054027074 NA intron (NR_126479, intron 8 of 9) MLTR11A|LTR|ERVK 89667 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_85_62_0.161907627136272_6.05823373706805_0.406378054027061 chr8 4312496 4313737 + 0.406378054027061 NA intron (NM_010485, intron 1 of 5) intron (NM_010485, intron 1 of 5) 11984 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding common_peak2_84_62_0.145152853017169_6.0498563500085_0.406378054027061-2 chr2 153161281 153161796 + 0.406378054027061 NA 5' UTR (NM_133847, exon 1 of 18) 5' UTR (NM_133847, exon 1 of 18) 237 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_84_62_0.145152853017169_6.0498563500085_0.406378054027061 chr7 46795569 46796542 + 0.406378054027061 NA promoter-TSS (NM_001291075) promoter-TSS (NM_001291075) -39 NM_008186 14884 Mm.22700 NM_008186 ENSMUSG00000006599 Gtf2h1 62kDa|AW743425|AW822074|BTF2 p62|C77871|p62 general transcription factor II H, polypeptide 1 protein-coding common_peak2_84_62_0.145152853017169_6.0498563500085_0.406378054027061-3 chr4 34614488 34615359 + 0.406378054027061 NA promoter-TSS (NM_015824) promoter-TSS (NM_015824) 19 NM_001159563 50793 Mm.399624 NM_015824 ENSMUSG00000040044 Orc3 Orc3l origin recognition complex, subunit 3 protein-coding common_peak2_84_62_0.145152853017169_6.0498563500085_0.406378054027061 chr13 59822506 59823124 + 0.406378054027061 NA intron (NM_153538, intron 1 of 27) CpG 332 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak1_85_62_0.161907627136272_6.05823373706805_0.406378054027061 chr1 155093803 155094738 + 0.406378054027061 NA Intergenic Intergenic 5366 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_85_62_0.161907627136272_6.05823373706805_0.406378054027061-2 chr19 6076776 6077711 + 0.406378054027061 NA promoter-TSS (NM_001081041) promoter-TSS (NM_001081041) -56 NM_001081041 68505 Mm.227361 NM_001081041 ENSMUSG00000024799 Vps51 1110014N23Rik|3110057M17Rik|AI837850|Ffr VPS51 GARP complex subunit protein-coding common_peak2_471_363_0.070441506404249_8.54301539340082_0.406263088233413 chr15 53342912 53345978 + 0.406263088233413 NA exon (NM_010162, exon 1 of 11) exon (NM_010162, exon 1 of 11) 1738 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_160_120_0.118594134522545_6.97816030453587_0.405744072202717 chr11 29693025 29694250 + 0.405744072202717 NA promoter-TSS (NM_194051) promoter-TSS (NM_194051) -137 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak1_160_120_0.118594134522545_6.97816030453587_0.405744072202717-2 chr8 61487737 61488379 + 0.405744072202717 NA intron (NM_145595, intron 1 of 4) CpG 324 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak2_317_274_-0.0907921100611944_8.05789175338142_0.405537659235872 chr18 35838432 35841755 + 0.405537659235872 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 9779 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_120_109_-0.153048952548335_6.70483523725049_0.405467962203103-2 chr5 103771742 103773631 + 0.405467962203103 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 18113 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_120_109_-0.153048952548335_6.70483523725049_0.405467962203103 chr12 78861792 78862913 + 0.405467962203103 NA promoter-TSS (NM_023721) promoter-TSS (NM_023721) 280 NM_026114 13665 Mm.196220 NM_026114 ENSMUSG00000021116 Eif2s1 0910001O23Rik|2410026C18Rik|35kDa|Eif2a|eIF2alpha eukaryotic translation initiation factor 2, subunit 1 alpha protein-coding common_peak2_133_99_0.130641848292419_6.70917711392093_0.405467962203079 chr10 111594708 111596297 + 0.405467962203079 NA Intergenic Intergenic -1229 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_241_211_-0.106664673160118_7.67458811798314_0.405366307544429 chr8 11391875 11394052 + 0.405366307544429 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -80137 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_190_144_0.102321094932083_7.23106963748098_0.405288483971646 chr19 55743492 55744478 + 0.405288483971646 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 2175 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_108_80_0.138844882243822_6.40927244400654_0.405155733918668 chr11 50377803 50378518 + 0.405155733918668 NA intron (NM_001347487, intron 1 of 12) CpG 441 NM_001347487 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak1_108_80_0.138844882243822_6.40927244400654_0.405155733918668 chr7 127614516 127615830 + 0.405155733918668 NA promoter-TSS (NM_177226) promoter-TSS (NM_177226) 99 NR_155450 320683 Mm.156718 NM_177226 ENSMUSG00000045639 Zfp629 9330199A09Rik|Znf629 zinc finger protein 629 protein-coding common_peak2_208_183_-0.112318122705846_7.46740289470409_0.405013518123126 chr7 118490892 118492377 + 0.405013518123126 NA 5' UTR (NM_001033380, exon 1 of 1) 5' UTR (NM_001033380, exon 1 of 1) 341 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak1_86_63_0.155748623604721_6.07787431180236_0.404803808383254 chr11 117968174 117969140 + 0.404803808383254 NA intron (NM_007707, intron 1 of 1) CpG 709 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_76_71_-0.189090549271123_6.07537972680675_0.404803808383254 chr12 98713660 98714709 + 0.404803808383254 NA intron (NM_001146199, intron 3 of 18) intron (NM_001146199, intron 3 of 18) 20461 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding common_peak1_86_63_0.155748623604721_6.07787431180236_0.404803808383254-2 chr6 17306156 17306784 + 0.404803808383254 NA exon (NM_007616, exon 1 of 3) exon (NM_007616, exon 1 of 3) 135 NM_007616 12389 Mm.28278 NM_007616 ENSMUSG00000007655 Cav1 Cav|Cav-1 caveolin 1, caveolae protein protein-coding common_peak2_86_63_0.155748623604721_6.07787431180236_0.404803808383254 chr7 84545768 84546723 + 0.404803808383254 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 17291 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA unique_peak2_57_55_-0.232441900680337_5.69113397171744_0.404412720632912 chr11 84818340 84819425 + 0.404412720632912 NA exon (NM_145433, exon 1 of 5) exon (NM_145433, exon 1 of 5) 633 NM_145433 217038 Mm.280825 NM_145433 ENSMUSG00000018405 Mrm1 A530065E19Rik mitochondrial rRNA methyltransferase 1 protein-coding common_peak2_57_55_-0.232441900680337_5.69113397171744_0.404412720632912-2 chr14 55899613 55900186 + 0.404412720632912 NA exon (NM_001082975, exon 2 of 6) exon (NM_001082975, exon 2 of 6) 333 NM_001082975 654795 Mm.486218 NM_001082975 ENSMUSG00000022223 Sdr39u1 2310014G06Rik short chain dehydrogenase/reductase family 39U, member 1 protein-coding common_peak1_57_55_-0.232441900680337_5.69113397171744_0.404412720632912 chr18 62180125 62180720 + 0.404412720632912 NA promoter-TSS (NM_007420) promoter-TSS (NM_007420) 322 NM_001013754 225609 Mm.296917 NM_001013754 ENSMUSG00000054589 Gm9949 EG225609 predicted gene 9949 protein-coding common_peak1_58_55_-0.207953836734924_5.70337800369014_0.404412720632912 chr10 58322345 58323069 + 0.404412720632912 NA promoter-TSS (NM_001359115) promoter-TSS (NM_001359115) -840 NM_001359115 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_66_48_0.166843173525179_5.6981314308778_0.404412720632912 chr1 40438546 40439822 + 0.404412720632912 NA promoter-TSS (NM_010743) promoter-TSS (NM_010743) -445 NM_001025602 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_57_55_-0.232441900680337_5.69113397171744_0.404412720632912-4 chrX 52987807 52988770 + 0.404412720632912 NA intron (NM_013556, intron 1 of 8) CpG 210 NM_013556 15452 Mm.299381 NM_013556 ENSMUSG00000025630 Hprt C81579|HPGRT|Hprt1 hypoxanthine guanine phosphoribosyl transferase protein-coding common_peak2_66_48_0.166843173525179_5.6981314308778_0.404412720632912-2 chr18 80151296 80151816 + 0.404412720632912 NA promoter-TSS (NM_175028) promoter-TSS (NM_175028) -74 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding common_peak2_57_55_-0.232441900680337_5.69113397171744_0.404412720632912-3 chr19 46075975 46076521 + 0.404412720632912 NA intron (NM_001039351, intron 1 of 12) intron (NM_001039351, intron 1 of 12) 401 NM_001039351 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_58_55_-0.207953836734924_5.70337800369014_0.404412720632912 chr11 84179818 84180672 + 0.404412720632912 NA Intergenic CpG -12769 NM_001037932 628813 Mm.390389 NM_001037932 ENSMUSG00000051452 Gm11437 AI463690 predicted gene 11437 protein-coding common_peak2_66_48_0.166843173525179_5.6981314308778_0.404412720632912 chr1 162126807 162127789 + 0.404412720632912 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -90325 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_66_48_0.166843173525179_5.6981314308778_0.404412720632912-2 chr15 100204800 100205515 + 0.404412720632912 NA intron (NM_172819, intron 28 of 32) intron (NM_172819, intron 28 of 32) -17121 NR_037311 100499528 NR_037311 ENSMUSG00000092752 Mir3473a Mir3473|mir-3473a|mmu-mir-3473|mmu-mir-3473a microRNA 3473a ncRNA common_peak2_58_55_-0.207953836734924_5.70337800369014_0.404412720632912-2 chr7 24459602 24460234 + 0.404412720632912 NA Intergenic Intergenic -2565 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak2_57_55_-0.232441900680337_5.69113397171744_0.404412720632912 chr11 61408036 61408722 + 0.404412720632912 NA Intergenic CpG -30304 NM_026183 67473 Mm.100741 NM_026183 ENSMUSG00000010122 Slc47a1 1300013J15Rik|AI036982|MATE1|mMATE1 solute carrier family 47, member 1 protein-coding common_peak1_243_213_-0.108420876244758_7.68725654827877_0.404352941555375 chr6 72898522 72900891 + 0.404352941555375 NA promoter-TSS (NM_001347231) promoter-TSS (NM_001347231) 273 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak1_148_133_-0.139591793932506_6.99629329349152_0.404100470262367 chr1 182018470 182019897 + 0.404100470262367 NA intron (NM_001083121, intron 1 of 13) intron (NM_001083121, intron 1 of 13) 797 NM_010135 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak1_41_41_-0.279782726759381_5.25242605939907_0.403996330555226 chr11 103016672 103017093 + 0.403996330555226 NA intron (NM_026551, intron 1 of 4) CpG 265 NM_026551 68087 Mm.277449 NM_026551 ENSMUSG00000020935 Dcakd 3010024O21Rik|6720485C15Rik|AI849483 dephospho-CoA kinase domain containing protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-6 chr2 167573859 167574826 + 0.403996330555226 NA Intergenic Intergenic 36147 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-4 chr13 49584146 49584891 + 0.403996330555226 NA intron (NM_001360708, intron 1 of 2) intron (NM_001360708, intron 1 of 2) 2056 NM_001360708 27047 Mm.390589 NM_012050 ENSMUSG00000048368 Omd OSAD|SLRR2C osteomodulin protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-5 chr2 165492696 165493316 + 0.403996330555226 NA intron (NM_001007581, intron 1 of 1) CpG 308 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-6 chr8 86888694 86889130 + 0.403996330555226 NA Intergenic Intergenic -3654 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-8 chr7 25783536 25784267 + 0.403996330555226 NA intron (NM_009465, intron 4 of 19) intron (NM_009465, intron 4 of 19) 4832 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding unique_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226 chr11 120784547 120785085 + 0.403996330555226 NA promoter-TSS (NM_009053) promoter-TSS (NM_009053) 301 NM_145370 209318 Mm.30195 NM_145370 ENSMUSG00000025156 Gps1 Cops1|Csn1|R75577|Sgn1 G protein pathway suppressor 1 protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-9 chr8 106512845 106513492 + 0.403996330555226 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 2316 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-7 chr4 58150230 58151057 + 0.403996330555226 NA intron (NM_022814, intron 3 of 47) intron (NM_022814, intron 3 of 47) 55953 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-2 chr10 59702813 59703404 + 0.403996330555226 NA intron (NM_001359267, intron 1 of 11) intron (NM_001359267, intron 1 of 11) 545 NM_001291443 216001 Mm.27199 NM_144822 ENSMUSG00000020111 Micu1 C730016L05Rik|Calc|Cbara1 mitochondrial calcium uptake 1 protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-8 chr9 44335288 44335957 + 0.403996330555226 NA TTS (NM_013551) TTS (NM_013551) 907 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding unique_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-2 chr16 57422127 57422876 + 0.403996330555226 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 69224 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-3 chr16 38347061 38347525 + 0.403996330555226 NA intron (NM_001017429, intron 1 of 2) intron (NM_001017429, intron 1 of 2) 294 NM_001017429 12856 Mm.27396 NM_001017429 ENSMUSG00000046516 Cox17 AI037035 cytochrome c oxidase assembly protein 17 protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-3 chr5 32611193 32611914 + 0.403996330555226 NA 5' UTR (NM_009535, exon 1 of 12) 5' UTR (NM_009535, exon 1 of 12) 382 NM_009535 22612 Mm.4558 NM_009535 ENSMUSG00000014932 Yes1 Yes|p61-Yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226 chr3 94658494 94659221 + 0.403996330555226 NA promoter-TSS (NM_011656) promoter-TSS (NM_011656) 15 NM_001293728 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-5 chr8 64543193 64543445 + 0.403996330555226 NA Intergenic L2|LINE|L2 -28878 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-4 chr16 57421154 57421777 + 0.403996330555226 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 68188 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226 chr1 138328621 138329401 + 0.403996330555226 NA Intergenic Intergenic 55273 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-4 chr7 70350892 70351581 + 0.403996330555226 NA TTS (NM_009697) TTS (NM_009697) 9357 NM_009697 11819 Mm.158143 NM_009697 ENSMUSG00000030551 Nr2f2 2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2 nuclear receptor subfamily 2, group F, member 2 protein-coding common_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-5 chr5 113156356 113156947 + 0.403996330555226 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 6662 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226 chr1 71865205 71865637 + 0.403996330555226 NA Intergenic Intergenic -22691 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-9 chr9 105643031 105643561 + 0.403996330555226 NA 5' UTR (NM_001081309, exon 1 of 20) 5' UTR (NM_001081309, exon 1 of 20) 301 NM_001081309 75669 Mm.274830 NM_029380 ENSMUSG00000032571 Pik3r4 2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e|Vps15|p150 phosphoinositide-3-kinase regulatory subunit 4 protein-coding common_peak1_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-4 chr5 148360669 148361357 + 0.403996330555226 NA intron (NM_007513, intron 2 of 12) intron (NM_007513, intron 2 of 12) 31802 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-2 chr10 128491991 128492844 + 0.403996330555226 NA intron (NM_001317217, intron 3 of 6) intron (NM_001317217, intron 3 of 6) 592 NM_001317220 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak2_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-3 chr16 13405739 13406276 + 0.403996330555226 NA intron (NM_153588, intron 13 of 14) intron (NM_153588, intron 13 of 14) -43516 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-7 chr8 126884443 126884948 + 0.403996330555226 NA Intergenic Intergenic 35675 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-5 chr6 87009894 87010339 + 0.403996330555226 NA intron (NM_020045, intron 1 of 7) CpG 280 NM_020045 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding common_peak1_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-2 chr15 5196275 5196802 + 0.403996330555226 NA intron (NM_001355621, intron 3 of 5) intron (NM_001355621, intron 3 of 5) 10978 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak1_42_41_-0.246074892569329_5.2692799764941_0.403996330555226-2 chr4 95918289 95918957 + 0.403996330555226 NA intron (NM_001113412, intron 14 of 15) intron (NM_001113412, intron 14 of 15) 48412 NR_045777 319247 Mm.473527 NM_175680 ENSMUSG00000044125 9530080O11Rik - RIKEN cDNA 9530080O11 gene ncRNA common_peak2_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-3 chr11 103140153 103141059 + 0.403996330555226 NA TTS (NM_027658) TTS (NM_027658) 7247 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_41_41_-0.279782726759381_5.25242605939907_0.403996330555226-6 chr6 112872896 112873568 + 0.403996330555226 NA intron (NM_080448, intron 1 of 21) L2b|LINE|L2 74034 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-2 chr12 55492110 55492579 + 0.40399633055522 NA exon (NM_010907, exon 1 of 6) exon (NM_010907, exon 1 of 6) 303 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522 chr11 120236503 120237120 + 0.40399633055522 NA intron (NM_198423, intron 1 of 27) CpG 3864 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522-3 chr1 162094532 162095347 + 0.40399633055522 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 89970 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522-7 chr5 31526093 31526900 + 0.40399633055522 NA promoter-TSS (NM_009206) promoter-TSS (NM_009206) 266 NM_028150 72195 Mm.164187 NM_028150 ENSMUSG00000053134 Supt7l 2610524B01Rik|6030455L14Rik suppressor of Ty 7-like protein-coding common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522 chr1 6279855 6280292 + 0.40399633055522 NA Intergenic Intergenic 65411 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-6 chr19 56991930 56992522 + 0.40399633055522 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 16349 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522-2 chr1 91817022 91817332 + 0.40399633055522 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 15716 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-5 chr19 53732281 53732636 + 0.40399633055522 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) 55152 NM_001170847 73713 Mm.313695 NM_001170847 ENSMUSG00000043639 Rbm20 1110018J23Rik|2010003H22Rik|AI646761 RNA binding motif protein 20 protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-7 chr19 59588220 59588702 + 0.40399633055522 NA Intergenic Intergenic 95325 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-3 chr14 61172956 61173430 + 0.40399633055522 NA intron (NM_172809, intron 2 of 9) CpG 34736 NM_015788 50720 Mm.440703 NM_015788 ENSMUSG00000048279 Sacs A230052M14|DNAJC29|E130115J16Rik sacsin protein-coding common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522-4 chr13 45911294 45911741 + 0.40399633055522 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 53474 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-8 chr9 45850265 45850924 + 0.40399633055522 NA intron (NM_011792, intron 1 of 8) intron (NM_011792, intron 1 of 8) 12049 NM_001145947 23821 Mm.24044 NM_011792 ENSMUSG00000032086 Bace1 ASP2|Bace|C76936 beta-site APP cleaving enzyme 1 protein-coding common_peak2_49_35_0.192373860709997_5.26611193179731_0.40399633055522-4 chr14 70599375 70599803 + 0.40399633055522 NA intron (NM_194345, intron 1 of 16) CpG 246 NM_194345 239170 Mm.247582 NM_194345 ENSMUSG00000022095 Fam160b2 G430067P06Rik|Rai16 family with sequence similarity 160, member B2 protein-coding common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522-6 chr4 127351827 127352347 + 0.40399633055522 NA exon (NM_008127, exon 2 of 2) exon (NM_008127, exon 2 of 2) 1994 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak1_49_35_0.192373860709997_5.26611193179731_0.40399633055522-5 chr17 71526899 71527517 + 0.40399633055522 NA promoter-TSS (NM_023294) promoter-TSS (NM_023294) -351 NM_023294 67052 Mm.225956 NM_023294 ENSMUSG00000024056 Ndc80 2610020P18Rik|AV139730|HEC|HEC1|Kntc2 NDC80 kinetochore complex component protein-coding common_peak2_109_81_0.13422531715961_6.42466466319789_0.403936755856314 chr11 23770344 23771656 + 0.403936755856314 NA promoter-TSS (NM_009044) promoter-TSS (NM_009044) -30 NM_009044 19696 Mm.4869 NM_009044 ENSMUSG00000020275 Rel c-Rel reticuloendotheliosis oncogene protein-coding common_peak1_109_81_0.13422531715961_6.42466466319789_0.403936755856314 chr12 31498750 31500010 + 0.403936755856314 NA intron (NM_001253847, intron 1 of 5) CpG 236 NM_134048 104836 Mm.273270 NM_134048 ENSMUSG00000020659 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 protein-coding common_peak2_98_90_-0.166948033146728_6.42432062362533_0.403936755856314 chr17 87569835 87571357 + 0.403936755856314 NA Intergenic Intergenic -65383 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding common_peak1_109_81_0.13422531715961_6.42466466319789_0.403936755856314-2 chr6 39592070 39593116 + 0.403936755856314 NA promoter-TSS (NM_001358797) promoter-TSS (NM_001358797) 28 NR_152450 68198 Mm.29415 NM_026612 ENSMUSG00000002416 Ndufb2 1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 protein-coding common_peak2_98_90_-0.166948033146728_6.42432062362533_0.403936755856314-2 chr7 127512055 127512920 + 0.403936755856314 NA non-coding (NR_024331, exon 1 of 1) non-coding (NR_024331, exon 1 of 1) 382 NR_024331 629159 Mm.256720 NR_024331 ENSMUSG00000101225 1700008J07Rik AW048743 RIKEN cDNA 1700008J07 gene ncRNA common_peak2_262_200_0.0894128513637238_7.69575811686079_0.40385360602314 chr3 89418523 89420355 + 0.40385360602314 NA intron (NM_011368, intron 1 of 12) intron (NM_011368, intron 1 of 12) 888 NM_011368 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding common_peak2_226_172_0.0949640824581204_7.48211026886579_0.403847918308257 chr15 58888075 58890032 + 0.403847918308257 NA promoter-TSS (NM_175226) promoter-TSS (NM_175226) -176 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-10 chr4 105225813 105226188 + 0.403610417161439 NA intron (NM_080555, intron 5 of 5) intron (NM_080555, intron 5 of 5) 68653 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439 chr11 70409734 70410038 + 0.403610417161439 NA exon (NM_029231, exon 1 of 17) exon (NM_029231, exon 1 of 17) 145 NM_029231 75273 Mm.340601 NM_029231 ENSMUSG00000018921 Pelp1 4930563C04Rik|MNAR proline, glutamic acid and leucine rich protein 1 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-4 chr11 8447531 8447999 + 0.403610417161439 NA intron (NM_001083587, intron 24 of 30) intron (NM_001083587, intron 24 of 30) 216770 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-7 chr4 40948664 40948936 + 0.403610417161439 NA promoter-TSS (NM_009736) promoter-TSS (NM_009736) 247 NM_029814 76959 Mm.212763 NM_029814 ENSMUSG00000028419 Chmp5 2210412K09Rik|AW545668 charged multivesicular body protein 5 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-3 chr10 60208345 60208909 + 0.403610417161439 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 10633 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-7 chr12 108894368 108894671 + 0.403610417161439 NA promoter-TSS (NM_001164314) promoter-TSS (NM_001164314) 247 NM_177602 212198 Mm.342082 NM_177602 ENSMUSG00000040877 Wdr25 B930090D16Rik WD repeat domain 25 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-8 chr16 56075048 56075640 + 0.403610417161439 NA promoter-TSS (NM_025483) promoter-TSS (NM_025483) -60 NM_025483 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding unique_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-2 chr15 55134888 55135166 + 0.403610417161439 NA intron (NM_001037937, intron 1 of 8) intron (NM_001037937, intron 1 of 8) 1591 NM_001037937 97998 Mm.295397 NM_145470 ENSMUSG00000022419 Deptor Depdc6 DEP domain containing MTOR-interacting protein protein-coding common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-9 chr8 71469643 71469947 + 0.403610417161439 NA intron (NM_001294259, intron 1 of 3) intron (NM_001294259, intron 1 of 3) 601 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-2 chr10 17350344 17350742 + 0.403610417161439 NA Intergenic Intergenic -254761 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-11 chr5 92773861 92774509 + 0.403610417161439 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 14377 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439 chr1 36470940 36471410 + 0.403610417161439 NA promoter-TSS (NM_033570) promoter-TSS (NM_033570) -422 NM_033570 94220 Mm.422638 NM_033570 ENSMUSG00000037408 Cnnm4 5430430O18Rik|Acdp4 cyclin M4 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-12 chr6 34582722 34583378 + 0.403610417161439 NA Intergenic Intergenic -15454 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-3 chr19 9975281 9975643 + 0.403610417161439 NA Intergenic Intergenic -5138 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-6 chr2 168549058 168549446 + 0.403610417161439 NA intron (NM_001037177, intron 3 of 6) intron (NM_001037177, intron 3 of 6) 41113 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-4 chr4 129019701 129019987 + 0.403610417161439 NA Intergenic Intergenic 26620 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-14 chr8 126825781 126826302 + 0.403610417161439 NA Intergenic Intergenic -22979 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-6 chr11 80080533 80080913 + 0.403610417161439 NA intron (NM_018776, intron 1 of 7) GC_rich|Low_complexity|Low_complexity 268 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-13 chr7 142362792 142363097 + 0.403610417161439 NA intron (NM_001347541, intron 2 of 2) intron (NM_001347541, intron 2 of 2) 9315 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-3 chr18 14783296 14783934 + 0.403610417161439 NA exon (NM_001100449, exon 1 of 15) exon (NM_001100449, exon 1 of 15) 370 NM_001100449 72504 Mm.312233 NM_001100449 ENSMUSG00000054321 Taf4b 105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2 TATA-box binding protein associated factor 4b protein-coding unique_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439 chr1 151235545 151236312 + 0.403610417161439 NA Intergenic Intergenic 97894 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-8 chr5 30232861 30233262 + 0.403610417161439 NA intron (NM_027652, intron 1 of 9) intron (NM_027652, intron 1 of 9) 480 NR_137634 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-5 chr11 72508961 72509699 + 0.403610417161439 NA intron (NM_029932, intron 8 of 11) intron (NM_029932, intron 8 of 11) -19410 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-4 chr18 75465659 75465918 + 0.403610417161439 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -48857 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-5 chr2 126302639 126302944 + 0.403610417161439 NA Intergenic Intergenic 150650 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak2_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-9 chr18 11940646 11941189 + 0.403610417161439 NA intron (NM_022021, intron 7 of 8) intron (NM_022021, intron 7 of 8) -100479 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak1_28_29_-0.324922594658008_4.74442929827952_0.403610417161439-2 chr11 86603488 86604003 + 0.403610417161439 NA intron (NM_001356531, intron 9 of 11) intron (NM_001356531, intron 9 of 11) -19587 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-5 chr15 78828637 78828939 + 0.403610417161433 NA Intergenic Intergenic -13859 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-10 chr6 127971472 127972178 + 0.403610417161433 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 84203 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433-5 chr5 65391609 65391952 + 0.403610417161433 NA promoter-TSS (NM_011292) promoter-TSS (NM_011292) 283 NM_001310612 79464 Mm.195776 NM_024471 ENSMUSG00000029199 Lias 2900022L22Rik|4933425M12Rik|7a5ex|C77512|LS|lip-syn lipoic acid synthetase protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-6 chr17 27840209 27840515 + 0.403610417161433 NA intron (NM_011432, intron 1 of 5) CpG 275 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-3 chr11 61973118 61973406 + 0.403610417161433 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 16499 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433-4 chr3 68508937 68509390 + 0.403610417161433 NA intron (NM_001113421, intron 2 of 7) intron (NM_001113421, intron 2 of 7) 14982 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-11 chr7 19817274 19817882 + 0.403610417161433 NA intron (NM_033601, intron 2 of 8) intron (NM_033601, intron 2 of 8) 5177 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-12 chrX 17571888 17572205 + 0.403610417161433 NA promoter-TSS (NM_001313746) promoter-TSS (NM_001313746) -39 NM_001313746 72018 Mm.41558 NM_028058 ENSMUSG00000025040 Fundc1 1500005J14Rik|1810033P05Rik FUN14 domain containing 1 protein-coding unique_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-2 chr8 126683253 126683736 + 0.403610417161433 NA Intergenic Intergenic -90058 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433 chr10 30802603 30803116 + 0.403610417161433 NA 5' UTR (NM_001358841, exon 1 of 16) 5' UTR (NM_001358841, exon 1 of 16) 467 NM_001358841 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433-7 chrX 155262668 155262984 + 0.403610417161433 NA intron (NM_019736, intron 1 of 14) intron (NM_019736, intron 1 of 14) 383 NM_019736 56360 Mm.268710 NM_019736 ENSMUSG00000025287 Acot9 0610041P13Rik|Acate2|C76421|MT-ACT48|MTE-2|U8|p48 acyl-CoA thioesterase 9 protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433-6 chr7 97071039 97071451 + 0.403610417161433 NA Intergenic Intergenic -10506 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-7 chr18 35022136 35022531 + 0.403610417161433 NA Intergenic Intergenic -67982 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding unique_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433 chr2 164786078 164786525 + 0.403610417161433 NA exon (NM_133924, exon 1 of 3) exon (NM_133924, exon 1 of 3) 280 NM_133924 101113 Mm.295647 NM_133924 ENSMUSG00000050373 Snx21 5730407K14Rik|AI481716 sorting nexin family member 21 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-2 chr11 20858940 20859559 + 0.403610417161433 NA Intergenic Intergenic -28141 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433-2 chr2 32424487 32424847 + 0.403610417161433 NA promoter-TSS (NM_001290558) promoter-TSS (NM_001290558) -601 NM_001290558 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-8 chr2 160731259 160731637 + 0.403610417161433 NA intron (NM_021280, intron 1 of 33) CpG 138 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433 chr1 62766637 62767003 + 0.403610417161433 NA intron (NM_001077404, intron 10 of 16) intron (NM_001077404, intron 10 of 16) 27912 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-9 chr5 23712096 23712572 + 0.403610417161433 NA intron (NR_015554, intron 1 of 4) CpG 333 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_34_24_0.207499802771079_4.74760609116026_0.403610417161433-4 chr12 27508215 27508615 + 0.403610417161433 NA Intergenic Intergenic -165697 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433 chr19 10111469 10111946 + 0.403610417161433 NA Intergenic Intergenic -10204 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak2_34_24_0.207499802771079_4.74760609116026_0.403610417161433-3 chr2 34869342 34869814 + 0.403610417161433 NA intron (NM_080554, intron 1 of 9) intron (NM_080554, intron 1 of 9) 1384 NM_001355544 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_122_111_-0.155559752229711_6.72957504594275_0.40349595689857 chr2 49451173 49452496 + 0.40349595689857 NA exon (NM_172663, exon 1 of 14) exon (NM_172663, exon 1 of 14) 348 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 protein-coding common_peak1_123_111_-0.143960362078066_6.73537474101857_0.40349595689857 chr15 64311116 64312436 + 0.40349595689857 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 897 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_122_111_-0.155559752229711_6.72957504594275_0.40349595689857 chr12 102282625 102283502 + 0.40349595689857 NA promoter-TSS (NM_001161365) promoter-TSS (NM_001161365) -11 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-2 chr15 64375492 64375959 + 0.403453972741636 NA intron (NM_001276461, intron 1 of 28) URR1A|DNA|hAT-Charlie 7194 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-4 chr11 117829205 117829848 + 0.403453972741636 NA intron (NM_027827, intron 2 of 10) B3A|SINE|B2 -3512 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-5 chr11 121736256 121736711 + 0.403453972741636 NA Intergenic Intergenic 34056 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-4 chr2 75643528 75643768 + 0.403453972741636 NA Intergenic Intergenic -15611 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-3 chr10 127542708 127543030 + 0.403453972741636 NA intron (NM_008512, intron 77 of 88) intron (NM_008512, intron 77 of 88) -8310 NM_183297 104080 Mm.437200 NM_183297 ENSMUSG00000040258 Nxph4 1110036M10Rik|AI851051 neurexophilin 4 protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-4 chr16 24498031 24498314 + 0.403453972741636 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -31142 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-8 chr4 107551829 107552189 + 0.403453972741636 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 117290 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-5 chr2 166433192 166433668 + 0.403453972741636 NA Intergenic Intergenic -14021 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-7 chr13 112443544 112443864 + 0.403453972741636 NA Intergenic Intergenic -20366 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-13 chr5 66089828 66090174 + 0.403453972741636 NA intron (NM_139065, intron 2 of 6) intron (NM_139065, intron 2 of 6) 8178 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-6 chr3 144695725 144696151 + 0.403453972741636 NA intron (NM_001282037, intron 9 of 10) intron (NM_001282037, intron 9 of 10) 24397 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-6 chr16 92300783 92301064 + 0.403453972741636 NA promoter-TSS (NM_138743) promoter-TSS (NM_138743) -380 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-6 chr12 118836812 118837195 + 0.403453972741636 NA Intergenic CpG -9326 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-10 chr2 164455822 164456127 + 0.403453972741636 NA Intergenic Intergenic -4997 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-3 chr13 24194879 24195212 + 0.403453972741636 NA intron (NM_026825, intron 2 of 37) intron (NM_026825, intron 2 of 37) 85745 NM_001311122 68732 Mm.211047 NM_026825 ENSMUSG00000021338 Carmil1 1110037D04Rik|AI425970|CARMIL|CARML1|D130057M20|Lrrc16|Lrrc16a capping protein regulator and myosin 1 linker 1 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-9 chr2 132613145 132613502 + 0.403453972741636 NA intron (NR_033469, intron 2 of 3) intron (NR_033469, intron 2 of 3) 15127 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-7 chr5 64610848 64611090 + 0.403453972741636 NA promoter-TSS (NR_045078) promoter-TSS (NR_045078) -270 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-2 chr11 117995582 117995807 + 0.403453972741636 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) -6576 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636 chr1 172632738 172633072 + 0.403453972741636 NA promoter-TSS (NM_026725) promoter-TSS (NM_026725) 69 NM_026725 68440 Mm.33024 NM_026725 ENSMUSG00000026544 Dusp23 1300005N15Rik|LDP-3 dual specificity phosphatase 23 protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-5 chr16 46010028 46010300 + 0.403453972741636 NA 5' UTR (NM_001134480, exon 1 of 4) 5' UTR (NM_001134480, exon 1 of 4) 249 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636 chr11 102185404 102185648 + 0.403453972741636 NA promoter-TSS (NM_172947) promoter-TSS (NM_172947) -270 NM_172947 268490 Mm.259079 NM_172947 ENSMUSG00000020922 Lsm12 1110032E16Rik|1110059P07|2600001B17Rik LSM12 homolog protein-coding unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636 chr11 121721052 121721367 + 0.403453972741636 NA Intergenic Intergenic 18782 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-8 chr15 86647636 86647905 + 0.403453972741636 NA Intergenic Intergenic 370095 NM_001358062 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-12 chr4 147848537 147848799 + 0.403453972741636 NA promoter-TSS (NM_001355730) promoter-TSS (NM_001355730) -250 NM_198619 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-10 chr9 31319079 31319320 + 0.403453972741636 NA intron (NM_001080817, intron 3 of 20) intron (NM_001080817, intron 3 of 20) 4092 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-9 chr7 109578722 109578930 + 0.403453972741636 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 37742 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-2 chr10 80703032 80703390 + 0.403453972741636 NA exon (NM_027829, exon 3 of 10) exon (NM_027829, exon 3 of 10) 518 NM_027829 71564 Mm.35802 NM_027829 ENSMUSG00000055862 Izumo4 9030607L17Rik|AI550407 IZUMO family member 4 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-14 chr8 70001494 70001742 + 0.403453972741636 NA Intergenic PB1D10|SINE|Alu -5234 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636 chr1 54826015 54826518 + 0.403453972741636 NA intron (NM_001081433, intron 2 of 27) intron (NM_001081433, intron 2 of 27) 100121 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-11 chr3 21954534 21954953 + 0.403453972741636 NA Intergenic Intergenic -121909 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-2 chr12 104908555 104908994 + 0.403453972741636 NA Intergenic Intergenic -43698 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak1_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-7 chr3 85971280 85971511 + 0.403453972741636 NA Intergenic CpG 31096 NM_001001650 368202 Mm.253822 NM_001001650 ENSMUSG00000049013 Prss48 Esspl|Gm1019 protease, serine 48 protein-coding unique_peak2_17_19_-0.423161866641414_4.11034716156666_0.403453972741636-3 chr15 77860362 77860674 + 0.403453972741636 NA Intergenic RSINE1|SINE|B4 -18343 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-4 chr15 99400192 99400429 + 0.403453972741633 NA intron (NM_001171034, intron 2 of 10) intron (NM_001171034, intron 2 of 10) 7091 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-15 chr8 90868731 90868994 + 0.403453972741633 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 40027 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633 chr11 29246635 29246895 + 0.403453972741633 NA intron (NM_025740, intron 1 of 9) intron (NM_025740, intron 1 of 9) 507 NM_025740 216618 Mm.128663 NM_025740 ENSMUSG00000020462 Cfap36 2300003H10|4931428D14Rik|Ccdc104 cilia and flagella associated protein 36 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-3 chr15 85687272 85687536 + 0.403453972741633 NA Intergenic Intergenic -16369 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-12 chr6 83016813 83017077 + 0.403453972741633 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 16526 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-12 chr8 36730348 36730657 + 0.403453972741633 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 2552 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-7 chr14 70332235 70332546 + 0.403453972741633 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 16043 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-10 chr19 10781310 10781503 + 0.403453972741633 NA intron (NR_027805, intron 1 of 3) intron (NR_027805, intron 1 of 3) 40459 NR_027805 403202 Mm.34482 NM_207529 ENSMUSG00000067577 A430093F15Rik Gm674 RIKEN cDNA A430093F15 gene ncRNA common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-9 chr16 34857878 34858212 + 0.403453972741633 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 73095 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-2 chr1 138348262 138348555 + 0.403453972741633 NA Intergenic Intergenic 74670 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-6 chr11 104628646 104629026 + 0.403453972741633 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 20836 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-11 chr2 137419682 137419971 + 0.403453972741633 NA Intergenic Charlie24|DNA|hAT-Charlie -303306 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633 chr1 24100620 24100889 + 0.403453972741633 NA promoter-TSS (NM_026604) promoter-TSS (NM_026604) -413 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-7 chr19 36121314 36121571 + 0.403453972741633 NA Intergenic Intergenic -1598 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding unique_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633 chr11 103685807 103686025 + 0.403453972741633 NA intron (NM_019650, intron 4 of 5) intron (NM_019650, intron 4 of 5) 11794 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-14 chr7 128554338 128554555 + 0.403453972741633 NA Intergenic Intergenic 30863 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-6 chr17 47296700 47296935 + 0.403453972741633 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 66587 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-13 chr9 77172483 77172766 + 0.403453972741633 NA intron (NM_027150, intron 6 of 7) intron (NM_027150, intron 6 of 7) -126843 NR_136923 26944 Mm.23199 NM_012033 ENSMUSG00000032357 Tinag AI452335|TIN-ag tubulointerstitial nephritis antigen protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-8 chr2 85228055 85228523 + 0.403453972741633 NA Intergenic Intergenic -31590 NM_001033346 241528 Mm.291095 NM_001033346 ENSMUSG00000075224 Lrrc55 A330097E02Rik|Gm351 leucine rich repeat containing 55 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-11 chr4 86712471 86712903 + 0.403453972741633 NA Intergenic Intergenic -35868 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-4 chr10 95779281 95779484 + 0.403453972741633 NA Intergenic Intergenic -161281 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-11 chr5 151173373 151173651 + 0.403453972741633 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 16681 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-8 chr15 77857998 77858232 + 0.403453972741633 NA Intergenic Intergenic -15940 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-7 chr18 67369944 67370268 + 0.403453972741633 NA Intergenic Intergenic -20625 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-5 chr15 79455856 79456056 + 0.403453972741633 NA Intergenic Intergenic -13813 NM_001359863 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding unique_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-4 chr5 3990170 3990506 + 0.403453972741633 NA intron (NM_194462, intron 14 of 47) intron (NM_194462, intron 14 of 47) 62152 NM_194462 100986 Mm.46044 NM_194462 ENSMUSG00000040407 Akap9 5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12 A kinase (PRKA) anchor protein (yotiao) 9 protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-3 chr1 165194019 165194272 + 0.403453972741633 NA intron (NR_151711, intron 1 of 6) CpG 288 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-10 chr3 36468022 36468305 + 0.403453972741633 NA intron (NM_009673, intron 2 of 12) intron (NM_009673, intron 2 of 12) 7361 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-9 chr2 167788847 167789100 + 0.403453972741633 NA Intergenic Intergenic 97796 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633 chr1 82291122 82291420 + 0.403453972741633 NA 5' UTR (NM_010570, exon 1 of 2) 5' UTR (NM_010570, exon 1 of 2) 168 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding unique_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-3 chr4 136434404 136434615 + 0.403453972741633 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 9897 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-5 chr15 99804029 99804438 + 0.403453972741633 NA intron (NM_001113545, intron 6 of 10) intron (NM_001113545, intron 6 of 10) 15916 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-16 chr9 14365886 14366215 + 0.403453972741633 NA intron (NM_028013, intron 1 of 1) intron (NM_028013, intron 1 of 1) 15192 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-8 chr2 73387058 73387299 + 0.403453972741633 NA promoter-TSS (NM_001190297) promoter-TSS (NM_001190297) -698 NM_001276444 68526 Mm.451014 NM_001080707 ENSMUSG00000041762 Gpr155 1110017O10Rik|DEPDC3|F730029F15Rik|PGR22 G protein-coupled receptor 155 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-6 chr18 80047023 80047417 + 0.403453972741633 NA intron (NM_053117, intron 1 of 2) CpG 325 NM_053117 93737 Mm.24678 NM_053117 ENSMUSG00000056214 Pard6g 2410049N21Rik|Par6a par-6 family cell polarity regulator gamma protein-coding unique_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-2 chr16 20548000 20548371 + 0.403453972741633 NA promoter-TSS (NM_013852) promoter-TSS (NM_013852) 371 NR_030670 100042948 Mm.406754 NR_030670 Gm15760 - mitochondrial ribosomal protein S18B pseudogene pseudo common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-13 chr7 16312886 16313126 + 0.403453972741633 NA intron (NM_133234, intron 2 of 3) intron (NM_133234, intron 2 of 3) 3423 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-2 chr1 170439434 170439847 + 0.403453972741633 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 117470 NM_027528 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-13 chr9 63678397 63678741 + 0.403453972741633 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 75923 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-9 chr3 41228784 41228997 + 0.403453972741633 NA Intergenic Intergenic -145844 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-10 chr3 83876430 83876754 + 0.403453972741633 NA Intergenic Intergenic -34984 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-3 chr13 23622184 23622534 + 0.403453972741633 NA exon (NM_015787, exon 1 of 1) exon (NM_015787, exon 1 of 1) 199 NM_015787 50709 Mm.170587 NM_015787 ENSMUSG00000051627 Hist1h1e H1-4|H1.4|H1e|H1f4|H1s-4|H1var2 histone cluster 1, H1e protein-coding common_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-5 chr11 59892276 59892543 + 0.403453972741633 NA Intergenic Intergenic -29090 NR_130986 69854 Mm.57859 NR_130986 ENSMUSG00000085551 1810063I02Rik - RIKEN cDNA 1810063I02 gene ncRNA unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-12 chr8 3516150 3516352 + 0.403453972741633 NA promoter-TSS (NM_001359123) promoter-TSS (NM_001359123) -612 NM_001359124 50767 Mm.23085 NM_015801 ENSMUSG00000004565 Pnpla6 AI661849|MSws|Nte patatin-like phospholipase domain containing 6 protein-coding common_peak2_22_15_0.249908281369499_4.12495414068475_0.403453972741633-2 chr12 59012744 59013242 + 0.403453972741633 NA promoter-TSS (NM_009147) promoter-TSS (NM_009147) -398 NM_025656 66603 Mm.35353 NM_025656 ENSMUSG00000060121 Gemin2 Sip1|gemin-2 gem nuclear organelle associated protein 2 protein-coding unique_peak1_22_15_0.249908281369499_4.12495414068475_0.403453972741633-4 chr15 76626659 76627029 + 0.403453972741633 NA promoter-TSS (NM_001305668) promoter-TSS (NM_001305668) -760 NM_001305668 66914 Mm.30028 NM_025842 ENSMUSG00000115987 Vps28 1110014J03Rik|CIIA|D730005C08Rik vacuolar protein sorting 28 protein-coding common_peak2_163_123_0.109708277640319_7.00905044920703_0.403297873094561-2 chr7 90095098 90097419 + 0.403297873094561 NA Intergenic B1F|SINE|Alu 33216 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_163_123_0.109708277640319_7.00905044920703_0.403297873094561 chr10 117709502 117710742 + 0.403297873094561 NA intron (NM_010786, intron 1 of 11) CpG-1528 636 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding common_peak1_77_72_-0.190505761770694_6.09457167799467_0.403275945635944 chr15 97821601 97822579 + 0.403275945635944 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -7227 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_77_72_-0.190505761770694_6.09457167799467_0.403275945635944-2 chr10 111575215 111576073 + 0.403275945635944 NA Intergenic Intergenic 18629 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_77_72_-0.190505761770694_6.09457167799467_0.403275945635944-3 chr17 34204475 34205830 + 0.403275945635944 NA intron (NM_011530, intron 1 of 11) intron (NM_011530, intron 1 of 11) 673 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak2_77_72_-0.190505761770694_6.09457167799467_0.403275945635944 chr10 84533280 84534309 + 0.403275945635944 NA promoter-TSS (NM_175451) promoter-TSS (NM_175451) 94 NM_175451 216197 Mm.334999 NM_175451 ENSMUSG00000046841 Ckap4 5630400A09Rik|CLIMP-63|P63 cytoskeleton-associated protein 4 protein-coding common_peak2_87_64_0.149752609995361_6.09724411802613_0.403275945635944 chr9 92542476 92543427 + 0.403275945635944 NA promoter-TSS (NR_029474) promoter-TSS (NR_029474) -82 NR_029474 78575 Mm.407669 NR_029474 ENSMUSG00000103622 B430319G15Rik D530025C14Rik RIKEN cDNA B430319G15 gene ncRNA common_peak1_77_72_-0.190505761770694_6.09457167799467_0.403275945635944-2 chr9 53383871 53385103 + 0.403275945635944 NA intron (NM_212445, intron 1 of 7) CpG 464 NM_212445 68304 Mm.427519 NM_212445 ENSMUSG00000034487 Kdelc2 2010004J24Rik|4833410J10Rik|AW549401 KDEL (Lys-Asp-Glu-Leu) containing 2 protein-coding common_peak1_212_186_-0.108493095526694_7.49264791212429_0.403274865230816 chr13 85287477 85289383 + 0.403274865230816 NA exon (NM_145452, exon 1 of 25) exon (NM_145452, exon 1 of 25) 1056 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_265_202_0.0913766277876116_7.71102423107898_0.402869278062525 chr19 21272249 21273729 + 0.402869278062525 NA intron (NM_009551, intron 1 of 5) CpG 711 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_110_82_0.129701932364728_6.43989039752929_0.402746000935386 chr8 3392705 3393769 + 0.402746000935386 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 229 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_99_91_-0.168318073477949_6.43940291931804_0.402746000935361 chr11 106216550 106217608 + 0.402746000935361 NA promoter-TSS (NM_026009) promoter-TSS (NM_026009) 153 NM_028074 72047 Mm.41367 NM_028074 ENSMUSG00000020705 Ddx42 1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 protein-coding common_peak1_99_91_-0.168318073477949_6.43940291931804_0.402746000935361 chr9 111271902 111272804 + 0.402746000935361 NA promoter-TSS (NM_026810) promoter-TSS (NM_026810) 508 NM_175266 77781 Mm.209005 NM_175266 ENSMUSG00000046785 Epm2aip1 A930003G21Rik|mKIAA0766 EPM2A (laforin) interacting protein 1 protein-coding common_peak1_653_506_0.0595785912060727_9.01563123260638_0.402681055318587 chr8 84199983 84204264 + 0.402681055318587 NA Intergenic PB1D10|SINE|Alu -6395 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak1_195_148_0.100079663757405_7.26920835234086_0.402579081435008 chr19 56988451 56990606 + 0.402579081435008 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 19047 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_67_49_0.158919687988483_5.72331603376897_0.402440571782919 chr12 17881914 17882744 + 0.402440571782919 NA Intergenic CpG 191520 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_67_49_0.158919687988483_5.72331603376897_0.402440571782919-2 chr9 65020975 65021601 + 0.402440571782919 NA intron (NM_021345, intron 1 of 10) CpG 429 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_67_49_0.158919687988483_5.72331603376897_0.402440571782919-4 chr2 120563230 120563807 + 0.402440571782919 NA intron (NM_011743, intron 1 of 21) CpG 341 NM_011743 20402 Mm.485295 NM_011743 ENSMUSG00000027288 Zfp106 Cd-1|D2Dcr28|EyeLinc12|H3a|Sh3bp3|Znf106|sirm|zfp-106 zinc finger protein 106 protein-coding common_peak1_67_49_0.158919687988483_5.72331603376897_0.402440571782919-2 chr11 69632933 69633697 + 0.402440571782919 NA 5' UTR (NM_011814, exon 1 of 17) 5' UTR (NM_011814, exon 1 of 17) 344 NM_011814 23879 Mm.41930 NM_011814 ENSMUSG00000018765 Fxr2 Fxr2h fragile X mental retardation, autosomal homolog 2 protein-coding common_peak1_67_49_0.158919687988483_5.72331603376897_0.402440571782919-3 chr18 75362301 75363204 + 0.402440571782919 NA intron (NR_155535, intron 6 of 6) intron (NR_155535, intron 6 of 6) 4336 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_67_49_0.158919687988483_5.72331603376897_0.402440571782919 chr10 40883584 40884524 + 0.402440571782919 NA promoter-TSS (NM_027879) promoter-TSS (NM_027879) 520 NM_031877 83767 Mm.41353 NM_031877 ENSMUSG00000019831 Wasf1 AI195380|AI838537|Scar|WAVE|WAVE-1 WAS protein family, member 1 protein-coding common_peak2_59_56_-0.209412448538856_5.72818378989531_0.402440571782907-2 chr13 95617908 95618383 + 0.402440571782907 NA intron (NM_010169, intron 1 of 1) CpG 321 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_59_56_-0.209412448538856_5.72818378989531_0.402440571782907 chr18 61951816 61952237 + 0.402440571782907 NA Intergenic Intergenic -1049 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak1_59_56_-0.209412448538856_5.72818378989531_0.402440571782907-2 chr8 95434123 95434742 + 0.402440571782907 NA intron (NM_008187, intron 1 of 5) CpG 437 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding common_peak2_59_56_-0.209412448538856_5.72818378989531_0.402440571782907-5 chr8 84237374 84237759 + 0.402440571782907 NA promoter-TSS (NM_172503) promoter-TSS (NM_172503) -524 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding common_peak2_59_56_-0.209412448538856_5.72818378989531_0.402440571782907 chr1 136140080 136140823 + 0.402440571782907 NA intron (NM_001039472, intron 1 of 34) CpG 9061 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak2_59_56_-0.209412448538856_5.72818378989531_0.402440571782907-3 chr17 47610922 47611524 + 0.402440571782907 NA promoter-TSS (NM_020048) promoter-TSS (NM_020048) 269 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak2_59_56_-0.209412448538856_5.72818378989531_0.402440571782907-4 chr7 16416452 16417220 + 0.402440571782907 NA exon (NM_198631, exon 2 of 14) exon (NM_198631, exon 2 of 14) 15640 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_250_218_-0.101222620079978_7.72417574956118_0.401903620724789 chr17 35241480 35243547 + 0.401903620724789 NA promoter-TSS (NM_001252457) promoter-TSS (NM_001252457) -304 NM_001252457 53817 Mm.439827 NM_019693 ENSMUSG00000019432 Ddx39b 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding common_peak2_78_73_-0.191885699353674_6.11351051595211_0.401792444501623 chr18 67774885 67775708 + 0.401792444501623 NA TTS (NR_045376) TTS (NR_045376) 420 NM_028112 72124 Mm.307315 NM_028112 ENSMUSG00000079614 Seh1l 2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1 SEH1-like (S. cerevisiae protein-coding common_peak2_88_65_0.143913107041474_6.11635067287919_0.401792444501623 chr15 73242303 73243254 + 0.401792444501623 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 12104 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak1_78_73_-0.191885699353674_6.11351051595211_0.401792444501623 chr16 49855255 49856227 + 0.401792444501623 NA promoter-TSS (NM_010581) promoter-TSS (NM_010581) 87 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_78_73_-0.191885699353674_6.11351051595211_0.401792444501623-2 chr7 84547018 84547723 + 0.401792444501623 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 18416 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_78_73_-0.191885699353674_6.11351051595211_0.401792444501623-2 chr2 32423312 32424172 + 0.401792444501623 NA intron (NM_146118, intron 1 of 10) intron (NM_146118, intron 1 of 10) 324 NM_001290558 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_88_65_0.143913107041474_6.11635067287919_0.401792444501623 chr13 38450674 38451534 + 0.401792444501623 NA intron (NM_007556, intron 1 of 6) intron (NM_007556, intron 1 of 6) 10689 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA common_peak1_88_65_0.143913107041474_6.11635067287919_0.401792444501623-2 chr19 11818235 11818932 + 0.401792444501623 NA intron (NM_011502, intron 1 of 10) CpG 820 NM_001286543 20908 Mm.272264 NM_011502 ENSMUSG00000041488 Stx3 Syn-3 syntaxin 3 protein-coding common_peak1_166_125_0.112592448526628_7.03357614776323_0.401729613028376 chr19 60579432 60580945 + 0.401729613028376 NA intron (NM_001172097, intron 1 of 6) intron (NM_001172097, intron 1 of 6) 835 NM_001172097 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding common_peak2_125_113_-0.14657469549115_6.75960266641917_0.401597068741964-2 chr17 78402574 78404026 + 0.401597068741964 NA intron (NM_001360407, intron 3 of 9) intron (NM_001360407, intron 3 of 9) 14852 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_125_113_-0.14657469549115_6.75960266641917_0.401597068741964 chr1 184033183 184034147 + 0.401597068741964 NA promoter-TSS (NM_022019) promoter-TSS (NM_022019) 333 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak2_215_189_-0.111418716577277_7.51414625004231_0.401593410437342 chr8 73351857 73353507 + 0.401593410437342 NA 5' UTR (NM_010687, exon 1 of 15) 5' UTR (NM_010687, exon 1 of 15) 858 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak2_112_83_0.138005278881491_6.46132006221951_0.401582499764368 chr3 90588142 90588955 + 0.401582499764368 NA promoter-TSS (NM_001355602) promoter-TSS (NM_001355602) -15 NM_001355602 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding common_peak2_112_83_0.138005278881491_6.46132006221951_0.401582499764368-2 chr8 31523951 31525138 + 0.401582499764368 NA Intergenic Intergenic 156795 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_101_92_-0.155547331117369_6.46138514554935_0.401582499764343 chr2 31454566 31455273 + 0.401582499764343 NA Intergenic Intergenic -15351 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak2_100_92_-0.169660911850618_6.45432835518272_0.401582499764343 chr2 170511225 170511909 + 0.401582499764343 NA non-coding (NR_040367, exon 1 of 3) non-coding (NR_040367, exon 1 of 3) 337 NM_001199902 109054 Mm.28808 NM_001013369 ENSMUSG00000052033 Pfdn4 0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4 prefoldin 4 protein-coding common_peak2_100_92_-0.169660911850618_6.45432835518272_0.401582499764343-2 chr3 142881070 142881912 + 0.401582499764343 NA intron (NM_178654, intron 1 of 21) CpG 513 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding common_peak1_350_269_0.0771194249401574_8.11537530952091_0.401386357032626 chr3 27708904 27711300 + 0.401386357032626 NA intron (NM_001356953, intron 1 of 26) CpG 350 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_50_36_0.181213093934956_5.30005991259643_0.401350871931209 chr12 84996403 84996652 + 0.401350871931209 NA exon (NM_178363, exon 1 of 21) exon (NM_178363, exon 1 of 21) 206 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak1_50_36_0.181213093934956_5.30005991259643_0.401350871931209 chr1 86154009 86154575 + 0.401350871931209 NA promoter-TSS (NM_001310702) promoter-TSS (NM_001310702) -488 NM_030184 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak2_43_42_-0.247089352105037_5.30272007864958_0.401350871931209-2 chr3 123507660 123508293 + 0.401350871931209 NA promoter-TSS (NR_028573) promoter-TSS (NR_028573) 90 NR_028573 100306957 Mm.260791 NR_028573 ENSMUSG00000092730 Snora24 ACA24 small nucleolar RNA, H/ACA box 24 snoRNA common_peak1_50_36_0.181213093934956_5.30005991259643_0.401350871931209-2 chr11 120255379 120255740 + 0.401350871931209 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 22612 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_43_42_-0.247089352105037_5.30272007864958_0.401350871931209 chr10 76650803 76651651 + 0.401350871931209 NA Intergenic Intergenic -27597 NM_001347207 12834 Mm.1949 NM_146007 ENSMUSG00000020241 Col6a2 Col6a-2 collagen, type VI, alpha 2 protein-coding unique_peak1_50_36_0.181213093934956_5.30005991259643_0.401350871931209-2 chr12 71885712 71886769 + 0.401350871931209 NA intron (NM_026102, intron 1 of 25) intron (NM_026102, intron 1 of 25) -3303 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak1_43_42_-0.247089352105037_5.30272007864958_0.401350871931209-2 chr5 140701515 140702287 + 0.401350871931209 NA intron (NM_001347517, intron 1 of 22) CpG 477 NM_028833 74239 Mm.179704 NM_028833 ENSMUSG00000036555 Iqce 1700028P05Rik|mKIAA1023 IQ motif containing E protein-coding common_peak2_43_42_-0.247089352105037_5.30272007864958_0.401350871931209 chr17 6948002 6948612 + 0.401350871931209 NA promoter-TSS (NM_001083945) promoter-TSS (NM_001083945) 49 NM_001083945 100037282 Mm.29830 NM_001083945 ENSMUSG00000023806 Rsph3b Rshl2b radial spoke 3B homolog (Chlamydomonas) protein-coding common_peak1_50_36_0.181213093934956_5.30005991259643_0.401350871931209-4 chr7 133112468 133113101 + 0.401350871931209 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 10699 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak2_43_42_-0.247089352105037_5.30272007864958_0.401350871931209 chr8 113803446 113804208 + 0.401350871931209 NA intron (NM_172466, intron 3 of 22) intron (NM_172466, intron 3 of 22) 45012 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak1_50_36_0.181213093934956_5.30005991259643_0.401350871931209 chr10 21789195 21790097 + 0.401350871931209 NA Intergenic Intergenic -92538 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_50_36_0.181213093934956_5.30005991259643_0.401350871931209-3 chr13 45685236 45685888 + 0.401350871931209 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 178118 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak2_50_36_0.181213093934956_5.30005991259643_0.401350871931209-2 chr3 126830171 126830986 + 0.401350871931209 NA intron (NM_001025438, intron 14 of 18) intron (NM_001025438, intron 14 of 18) 112808 NM_001034168 109676 Mm.220242 NM_178655 ENSMUSG00000032826 Ank2 100043364|AI835472|AW491075|Ank-2|Gm4392 ankyrin 2, brain protein-coding common_peak1_43_42_-0.247089352105037_5.30272007864958_0.401350871931209-3 chr8 95010413 95011125 + 0.401350871931209 NA intron (NM_018882, intron 12 of 13) intron (NM_018882, intron 12 of 13) -6923 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak1_198_150_0.102603613022874_7.28970654583652_0.401276523330272 chr18 75500419 75502456 + 0.401276523330272 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -13208 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_153_137_-0.134744984180224_7.04115196468806_0.400963387725319 chr2 117667919 117669594 + 0.400963387725319 NA Intergenic Intergenic 144046 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_252_220_-0.102968878789157_7.73641811999685_0.400956107692655 chr8 20122299 20123068 + 0.400956107692655 NA Intergenic CpG 174749 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_606_470_0.0590022336676839_8.90908436644663_0.400686141442612 chr2 137113475 137118239 + 0.400686141442612 NA intron (NM_013822, intron 1 of 25) CpG-8595 663 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_138_104_0.112731533716964_6.7706112845246_0.400673784039031-2 chr11 116023365 116024513 + 0.400673784039031 NA exon (NM_008211, exon 2 of 4) exon (NM_008211, exon 2 of 4) 565 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak1_138_104_0.112731533716964_6.7706112845246_0.400673784039031 chr10 81176698 81177907 + 0.400673784039031 NA intron (NM_007907, intron 1 of 13) intron (NM_007907, intron 1 of 13) 671 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak1_138_104_0.112731533716964_6.7706112845246_0.400673784039031-3 chr18 75695495 75697512 + 0.400673784039031 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 1193 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak2_139_104_0.123000515733193_6.77574577553272_0.400673784039031 chr3 87985857 87986681 + 0.400673784039031 NA Intergenic Intergenic 14087 NM_007529 12032 Mm.4598 NM_007529 ENSMUSG00000004892 Bcan Cspg7 brevican protein-coding common_peak2_138_104_0.112731533716964_6.7706112845246_0.400673784039031 chr13 45906638 45908561 + 0.400673784039031 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 57392 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_139_104_0.123000515733193_6.77574577553272_0.400673784039031 chr12 33175592 33177568 + 0.400673784039031 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 28894 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_139_104_0.123000515733193_6.77574577553272_0.400673784039031-2 chr7 135608891 135609778 + 0.400673784039031 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 3506 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_69_50_0.171875671001064_5.75836317747203_0.400542309525533-3 chr7 127232372 127233106 + 0.400542309525533 NA promoter-TSS (NM_001360912) promoter-TSS (NM_001360912) -322 NM_001360912 233887 Mm.258371 NM_146201 ENSMUSG00000045598 Zfp553 2600009K23Rik|AI431057|BC026401|C330013F15Rik|Znf48 zinc finger protein 553 protein-coding common_peak2_69_50_0.171875671001064_5.75836317747203_0.400542309525533-2 chr5 130254570 130255296 + 0.400542309525533 NA promoter-TSS (NM_178897) promoter-TSS (NM_178897) 597 NM_023248 66711 Mm.280484 NM_023248 ENSMUSG00000025337 Sbds 4733401P19Rik|AI836084|CGI-97|SDS SBDS ribosome maturation factor protein-coding common_peak2_68_50_0.151263562052214_5.7480571229976_0.400542309525533 chr1 75316354 75317334 + 0.400542309525533 NA intron (NM_001110831, intron 1 of 14) intron (NM_001110831, intron 1 of 14) 173 NM_016878 13437 Mm.24680 NM_016878 ENSMUSG00000026209 Dnpep AA407814 aspartyl aminopeptidase protein-coding common_peak1_68_50_0.151263562052214_5.7480571229976_0.400542309525533-3 chr2 72316927 72317577 + 0.400542309525533 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 31551 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_69_50_0.171875671001064_5.75836317747203_0.400542309525533 chr13 54693156 54693760 + 0.400542309525533 NA intron (NR_027396, intron 1 of 10) intron (NR_027396, intron 1 of 10) 502 NR_027395 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak2_68_50_0.151263562052214_5.7480571229976_0.400542309525533-2 chr10 128058171 128058762 + 0.400542309525533 NA promoter-TSS (NM_019766) promoter-TSS (NM_019766) -516 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 protein-coding common_peak1_68_50_0.151263562052214_5.7480571229976_0.400542309525533 chr12 80370626 80371614 + 0.400542309525533 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 20557 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_68_50_0.151263562052214_5.7480571229976_0.400542309525533-5 chr6 124964762 124965520 + 0.400542309525533 NA intron (NM_001355542, intron 1 of 7) intron (NM_001355542, intron 1 of 7) 397 NM_012003 26894 Mm.244536 NM_012003 ENSMUSG00000030127 Cops7a D6Ertd35e|SGN7a COP9 signalosome subunit 7A protein-coding common_peak1_69_50_0.171875671001064_5.75836317747203_0.400542309525533 chr18 80151211 80151729 + 0.400542309525533 NA promoter-TSS (NM_175028) promoter-TSS (NM_175028) 12 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding common_peak1_68_50_0.151263562052214_5.7480571229976_0.400542309525533-2 chr16 87354236 87354537 + 0.400542309525533 NA exon (NM_001159331, exon 1 of 5) exon (NM_001159331, exon 1 of 5) 201 NM_026366 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding common_peak2_68_50_0.151263562052214_5.7480571229976_0.400542309525533-3 chr3 101712656 101713302 + 0.400542309525533 NA Intergenic Intergenic -108272 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_69_50_0.171875671001064_5.75836317747203_0.400542309525533-2 chr2 156111327 156111965 + 0.400542309525533 NA intron (NM_029397, intron 1 of 2) CpG 319 NM_170598 75710 Mm.27660 NM_029397 ENSMUSG00000089824 Rbm12 5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765 RNA binding motif protein 12 protein-coding common_peak1_68_50_0.151263562052214_5.7480571229976_0.400542309525533-4 chr3 84317793 84318632 + 0.400542309525533 NA Intergenic Intergenic -13437 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_60_57_-0.210824925824696_5.75256853221522_0.400542309525508 chr13 32495489 32496384 + 0.400542309525508 NA Intergenic Intergenic -157392 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_234_178_0.0953924656451877_7.53151201008685_0.400502838278967 chr1 43161737 43163823 + 0.400502838278967 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 1181 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_102_93_-0.157001486619411_6.47608810836793_0.40044532686291-2 chr18 80536031 80536748 + 0.40044532686291 NA Intergenic Intergenic 8157 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_102_93_-0.157001486619411_6.47608810836793_0.40044532686291 chr13 91224142 91224954 + 0.40044532686291 NA promoter-TSS (NM_025770) promoter-TSS (NM_025770) -561 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak1_102_93_-0.157001486619411_6.47608810836793_0.40044532686291 chr17 71474968 71475979 + 0.40044532686291 NA promoter-TSS (NM_028887) promoter-TSS (NM_028887) -130 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak1_80_74_-0.175436237368267_6.14110057181175_0.40035139952362 chr2 74697563 74698679 + 0.40035139952362 NA exon (NM_013555, exon 1 of 2) exon (NM_013555, exon 1 of 2) 358 NM_013555 15438 Mm.26544 NM_013555 ENSMUSG00000043342 Hoxd9 Hox-4.4|Hox-5.2 homeobox D9 protein-coding common_peak2_89_66_0.138223977395567_6.13520117915556_0.40035139952362 chr15 62138807 62139748 + 0.40035139952362 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 80174 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_79_74_-0.193231706670694_6.13220283716053_0.40035139952362-2 chr9 64049624 64050696 + 0.40035139952362 NA intron (NR_040713, intron 1 of 2) intron (NR_040713, intron 1 of 2) 331 NR_040713 68697 Mm.491042 NR_040713 ENSMUSG00000097036 1110036E04Rik - RIKEN cDNA 1110036E04 gene ncRNA common_peak1_80_74_-0.175436237368267_6.14110057181175_0.40035139952362-2 chr5 114774599 114775338 + 0.40035139952362 NA promoter-TSS (NM_026718) promoter-TSS (NM_026718) 15 NR_027872 67642 Mm.482535 NM_175120 ENSMUSG00000092183 4930515G01Rik - RIKEN cDNA 4930515G01 gene ncRNA common_peak2_89_66_0.138223977395567_6.13520117915556_0.40035139952362-2 chr8 105516253 105517217 + 0.40035139952362 NA Intergenic Intergenic -2011 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak1_79_74_-0.193231706670694_6.13220283716053_0.40035139952362 chr19 4012212 4012692 + 0.40035139952362 NA intron (NM_133666, intron 1 of 9) intron (NM_133666, intron 1 of 9) 303 NM_133666 17995 Mm.29842 NM_133666 ENSMUSG00000037916 Ndufv1 CI-51kD NADH dehydrogenase (ubiquinone) flavoprotein 1 protein-coding common_peak2_155_138_-0.126677255187428_7.05560244512979_0.400208738142035 chr10 84440785 84441834 + 0.400208738142035 NA promoter-TSS (NM_001004363) promoter-TSS (NM_001004363) -838 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_312_239_0.0829023002079525_7.9483417457125_0.400149002401689 chr4 127353604 127356202 + 0.400149002401689 NA promoter-TSS (NM_008127) promoter-TSS (NM_008127) -822 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak2_200_152_0.0979457976019464_7.30636074149363_0.400006965494322 chr10 112928065 112929608 + 0.400006965494322 NA 5' UTR (NM_001033474, exon 1 of 1) 5' UTR (NM_001033474, exon 1 of 1) 190 NM_001033474 382423 Mm.431239 NM_001033474 ENSMUSG00000074748 Atxn7l3b 4921506J03Rik|6230409E21Rik|AI315132 ataxin 7-like 3B protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-14 chr5 140705117 140705602 + 0.399869693390336 NA intron (NM_001276287, intron 1 of 13) intron (NM_001276287, intron 1 of 13) 293 NM_001276287 231841 Mm.271932 NM_172724 ENSMUSG00000000148 Brat1 AA881470|Baat1 BRCA1-associated ATM activator 1 protein-coding common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-5 chr4 143289168 143289726 + 0.399869693390336 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 10117 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-8 chr7 116288735 116289345 + 0.399869693390336 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) 19336 NM_001305185 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-8 chr3 144577363 144577957 + 0.399869693390336 NA exon (NM_053102, exon 2 of 5) exon (NM_053102, exon 2 of 5) 7233 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-8 chr4 83378558 83379060 + 0.399869693390336 NA non-coding (NR_045450, exon 3 of 3) non-coding (NR_045450, exon 3 of 3) 11859 NR_045450 790913 Mm.406752 NR_045450 ENSMUSG00000086321 Gm11413 - predicted gene 11413 ncRNA common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-4 chr18 32146969 32147577 + 0.399869693390336 NA Intergenic MTE2a|LTR|ERVL-MaLR -7703 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-10 chr6 82042622 82043254 + 0.399869693390336 NA intron (NM_145570, intron 1 of 2) intron (NM_145570, intron 1 of 2) 1310 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-3 chr11 80565166 80565591 + 0.399869693390336 NA intron (NM_177390, intron 20 of 21) intron (NM_177390, intron 20 of 21) -56272 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-9 chr3 145104572 145105638 + 0.399869693390336 NA Intergenic Intergenic -5999 NM_178697 229933 Mm.331420 NM_178697 ENSMUSG00000036960 Clca2 4732440A06|AI586120|Clca5 chloride channel accessory 2 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-11 chr4 156083133 156083794 + 0.399869693390336 NA Intergenic Intergenic -23661 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 - predicted gene 13648 ncRNA unique_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-3 chr17 44649982 44650453 + 0.399869693390336 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 85959 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336 chr15 41716389 41716682 + 0.399869693390336 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -72460 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-3 chr16 55523092 55523741 + 0.399869693390336 NA Intergenic Intergenic 28685 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-12 chr5 118459366 118459873 + 0.399869693390336 NA Intergenic Intergenic -101100 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-6 chr2 163810413 163810703 + 0.399869693390336 NA Intergenic Intergenic -10276 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-7 chr8 126619298 126619665 + 0.399869693390336 NA Intergenic Intergenic -26045 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-8 chr8 126663488 126663847 + 0.399869693390336 NA Intergenic Intergenic -70231 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-17 chr8 107198235 107198511 + 0.399869693390336 NA Intergenic Intergenic 47712 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-2 chr11 61267276 61267858 + 0.399869693390336 NA promoter-TSS (NR_138545) promoter-TSS (NR_138545) -39 NR_138545 11671 Mm.398221 NM_007437 ENSMUSG00000010025 Aldh3a2 AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH aldehyde dehydrogenase family 3, subfamily A2 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-13 chr5 137294010 137294430 + 0.399869693390336 NA promoter-TSS (NM_027356) promoter-TSS (NM_027356) 440 NR_106196 102466887 NR_106196 ENSMUSG00000099145 Mir8116 Gm27485|mmu-mir-8116 microRNA 8116 ncRNA common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336 chr10 96627849 96628421 + 0.399869693390336 NA Intergenic RMER1C|Other|Other 11134 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-7 chr2 153136578 153137007 + 0.399869693390336 NA exon (NM_010407, exon 9 of 13) exon (NM_010407, exon 9 of 13) -24509 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding unique_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336 chr2 168076480 168076895 + 0.399869693390336 NA Intergenic Intergenic -4317 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-10 chr4 139582128 139582721 + 0.399869693390336 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 7704 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding unique_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-2 chr16 34937446 34938246 + 0.399869693390336 NA intron (NR_040536, intron 1 of 2) intron (NR_040536, intron 1 of 2) 1483 NR_040536 76649 Mm.420532 NR_040536 ENSMUSG00000100593 1700119H24Rik - RIKEN cDNA 1700119H24 gene ncRNA common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-9 chr4 132065879 132066310 + 0.399869693390336 NA intron (NM_183428, intron 1 of 20) intron (NM_183428, intron 1 of 20) 6003 NM_183428 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336 chr12 17373109 17373708 + 0.399869693390336 NA intron (NM_001008421, intron 11 of 20) intron (NM_001008421, intron 11 of 20) 18016 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-6 chr6 38876279 38876740 + 0.399869693390336 NA promoter-TSS (NM_001294144) promoter-TSS (NM_001294144) -319 NM_001294143 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336 chr15 10771503 10771929 + 0.399869693390336 NA intron (NR_045063, intron 5 of 6) intron (NR_045063, intron 5 of 6) 56816 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-4 chr17 63677633 63678094 + 0.399869693390336 NA Intergenic Intergenic -177283 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-15 chr6 52238770 52239337 + 0.399869693390336 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 1801 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-2 chr16 25061169 25061546 + 0.399869693390336 NA intron (NR_040374, intron 1 of 2) intron (NR_040374, intron 1 of 2) 1718 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-5 chr19 41801525 41801934 + 0.399869693390336 NA intron (NM_027667, intron 1 of 11) CpG 355 NM_001163495 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-18 chr8 110618651 110619028 + 0.399869693390336 NA non-coding (NR_151674, exon 1 of 19) non-coding (NR_151674, exon 1 of 19) 272 NR_151675 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-16 chr7 133112825 133113141 + 0.399869693390336 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 10500 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-5 chr18 82521814 82522301 + 0.399869693390336 NA exon (NM_010777, exon 3 of 7) exon (NM_010777, exon 3 of 7) -32406 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-4 chr13 5869352 5869870 + 0.399869693390336 NA 3' UTR (NM_011803, exon 4 of 4) 3' UTR (NM_011803, exon 4 of 4) 8122 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-20 chrX 38634545 38635045 + 0.399869693390336 NA intron (NM_021550, intron 1 of 1) intron (NM_021550, intron 1 of 1) 348 NM_021550 59048 Mm.441410 NM_021550 ENSMUSG00000048970 C1galt1c1 1500002I11Rik|AB030184|C1GalT2|C81205|Cosmc C1GALT1-specific chaperone 1 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-19 chr9 44494168 44494710 + 0.399869693390336 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) -4697 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-5 chr13 38449980 38450416 + 0.399869693390336 NA intron (NM_007556, intron 1 of 6) RMER17C2|LTR|ERVK 11595 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-3 chr16 87382589 87383053 + 0.399869693390336 NA intron (NM_001081068, intron 25 of 29) intron (NM_001081068, intron 25 of 29) 28636 NM_026366 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-2 chr16 13358439 13358945 + 0.399869693390336 NA exon (NM_153588, exon 1 of 15) exon (NM_153588, exon 1 of 15) 271 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-6 chr2 74578428 74579049 + 0.399869693390336 NA intron (NM_001110209, intron 1 of 13) CpG 210 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding unique_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336 chr15 28132048 28132357 + 0.399869693390336 NA Intergenic Intergenic -71564 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336 chr10 56228801 56229093 + 0.399869693390336 NA promoter-TSS (NM_001033385) promoter-TSS (NM_001033385) -258 NM_001033385 544696 Mm.411188 NM_001033385 ENSMUSG00000038122 Tbc1d32 Bromi|C6orf170|D630037F22Rik|b2b2284Clo TBC1 domain family, member 32 protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-3 chr11 117259416 117259862 + 0.399869693390336 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -6607 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_29_30_-0.323663765187746_4.792364427793_0.399869693390336-4 chr19 24994634 24995096 + 0.399869693390336 NA Intergenic Intergenic -4664 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_35_25_0.191271530531613_4.7960754834069_0.399869693390336-6 chr17 74295694 74296157 + 0.399869693390336 NA Intergenic Intergenic -1062 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak1_35_25_0.191271530531613_4.7960754834069_0.399869693390336-7 chr3 69317073 69317538 + 0.399869693390336 NA 5' UTR (NM_178726, exon 1 of 4) 5' UTR (NM_178726, exon 1 of 4) 387 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-2 chr11 70701443 70702028 + 0.399869693390336 NA intron (NM_153103, intron 1 of 22) intron (NM_153103, intron 1 of 22) 1187 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding common_peak2_29_30_-0.323663765187746_4.792364427793_0.399869693390336-7 chr3 41199210 41199949 + 0.399869693390336 NA Intergenic Intergenic -116533 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_128_115_-0.137957842263929_6.78900207399561_0.399767303863329 chr2 32961745 32962843 + 0.399767303863329 NA intron (NM_009076, intron 2 of 6) intron (NM_009076, intron 2 of 6) 582 NM_009076 269261 Mm.250030 NM_009076 ENSMUSG00000038900 Rpl12 E430018F03 ribosomal protein L12 protein-coding common_peak2_127_115_-0.149105889629508_6.78342805031282_0.399767303863329 chr18 53862132 53863318 + 0.399767303863329 NA intron (NM_152809, intron 1 of 12) CpG 612 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_140_105_0.119521471393067_6.78768119025973_0.399767303863305 chr8 54608313 54609360 + 0.399767303863305 NA intron (NM_133711, intron 5 of 5) intron (NM_133711, intron 5 of 5) 8055 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak2_156_139_-0.12786570592056_7.06535016398469_0.399465403851711 chr9 96780532 96782174 + 0.399465403851711 NA Intergenic Intergenic 15791 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_169_128_0.104150541520588_7.06330252618355_0.399465403851711 chr19 4396065 4397094 + 0.399465403851711 NA 5' UTR (NM_001001984, exon 1 of 21) 5' UTR (NM_001001984, exon 1 of 21) 498 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding common_peak1_187_165_-0.115488087191358_7.31729538775125_0.399384172147537 chr9 64172377 64174501 + 0.399384172147537 NA promoter-TSS (NM_026507) promoter-TSS (NM_026507) 52 NM_024212 67891 Mm.280083 NM_024212 ENSMUSG00000032399 Rpl4 2010004J23Rik ribosomal protein L4 protein-coding common_peak1_103_94_-0.158427393022324_6.49064191181979_0.39933359820233 chr15 59782879 59783440 + 0.39933359820233 NA Intergenic Intergenic 11800 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_103_94_-0.158427393022324_6.49064191181979_0.39933359820233 chr1 43445436 43446943 + 0.39933359820233 NA intron (NM_010879, intron 1 of 4) CpG 438 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_103_94_-0.158427393022324_6.49064191181979_0.39933359820233-2 chr4 59548520 59549222 + 0.39933359820233 NA intron (NM_144904, intron 1 of 14) CpG 493 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_90_67_0.13267940320566_6.15380254285317_0.398951012888126 chr9 62626511 62628059 + 0.398951012888126 NA Intergenic Intergenic -50570 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding common_peak2_91_67_0.148335480972672_6.16163058173668_0.398951012888126-2 chr13 70654741 70655377 + 0.398951012888126 NA Intergenic Intergenic -17425 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_91_67_0.148335480972672_6.16163058173668_0.398951012888126-3 chr17 46889615 46890202 + 0.398951012888126 NA promoter-TSS (NM_178385) promoter-TSS (NM_178385) -713 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_81_75_-0.176967945843147_6.15944354052201_0.398951012888126 chr4 89440608 89441722 + 0.398951012888126 NA intron (NR_132431, intron 5 of 9) Charlie16a|DNA|hAT-Charlie -130133 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_81_75_-0.176967945843147_6.15944354052201_0.398951012888126-3 chr8 26974441 26974849 + 0.398951012888126 NA Intergenic Intergenic -2691 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak2_91_67_0.148335480972672_6.16163058173668_0.398951012888126-4 chr3 84581494 84582325 + 0.398951012888126 NA intron (NM_001293801, intron 1 of 7) intron (NM_001293801, intron 1 of 7) 716 NM_001293801 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding common_peak2_91_67_0.148335480972672_6.16163058173668_0.398951012888126 chr12 31350414 31351634 + 0.398951012888126 NA intron (NM_007861, intron 1 of 13) CpG 447 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding common_peak2_81_75_-0.176967945843147_6.15944354052201_0.398951012888126-2 chr7 127471093 127472433 + 0.398951012888126 NA 5' UTR (NM_145589, exon 1 of 11) 5' UTR (NM_145589, exon 1 of 11) 149 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding common_peak1_81_75_-0.176967945843147_6.15944354052201_0.398951012888126 chr14 34548712 34549439 + 0.398951012888126 NA intron (NM_001039071, intron 8 of 12) CpG -26274 NM_030062 78243 Mm.117483 NM_030062 ENSMUSG00000021797 9230112D13Rik - RIKEN cDNA 9230112D13 gene protein-coding common_peak1_141_106_0.116098775732342_6.79951637426732_0.398877173414238 chr13 42547726 42549315 + 0.398877173414238 NA Intergenic Intergenic -132279 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-7 chr7 135509618 135510361 + 0.398838069828027 NA Intergenic Intergenic 18665 NM_178669 212070 Mm.39721 NM_178669 ENSMUSG00000050866 Clrn3 AI649392|Tmem12 clarin 3 protein-coding common_peak1_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-2 chr17 29887343 29888310 + 0.398838069828027 NA promoter-TSS (NM_001081160) promoter-TSS (NM_001081160) 56 NM_001081160 74762 Mm.40901 NM_001081160 ENSMUSG00000043557 Mdga1 1200011I03Rik|GPIM|Mamdc3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-9 chr4 98382712 98383183 + 0.398838069828027 NA intron (NM_053157, intron 1 of 6) CpG 318 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-4 chr16 25061070 25061764 + 0.398838069828027 NA intron (NR_040374, intron 1 of 2) intron (NR_040374, intron 1 of 2) 1778 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-3 chr2 152414124 152415043 + 0.398838069828027 NA exon (NM_175126, exon 1 of 1) exon (NM_175126, exon 1 of 1) 461 NM_175126 67917 Mm.391810 NM_175126 ENSMUSG00000074682 Zcchc3 2810406K24Rik zinc finger, CCHC domain containing 3 protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-4 chr15 6279060 6279717 + 0.398838069828027 NA Intergenic Intergenic -20401 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_51_37_0.170555681438284_5.33320535416273_0.398838069828027-4 chr6 15720601 15721232 + 0.398838069828027 NA 5' UTR (NM_175088, exon 1 of 5) 5' UTR (NM_175088, exon 1 of 5) 255 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-2 chr13 34369657 34370444 + 0.398838069828027 NA Intergenic Intergenic -24868 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-5 chr2 119351367 119351927 + 0.398838069828027 NA intron (NM_026929, intron 1 of 2) intron (NM_026929, intron 1 of 2) 405 NM_026929 69065 Mm.35083 NM_026929 ENSMUSG00000027313 Chac1 1810008K03Rik ChaC, cation transport regulator 1 protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-7 chr4 40948672 40949244 + 0.398838069828027 NA promoter-TSS (NM_009736) promoter-TSS (NM_009736) 405 NM_029814 76959 Mm.212763 NM_029814 ENSMUSG00000028419 Chmp5 2210412K09Rik|AW545668 charged multivesicular body protein 5 protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-5 chr2 73584862 73585548 + 0.398838069828027 NA intron (NR_153820, intron 1 of 1) PB1D11|SINE|Alu 345 NR_153820 102633437 NR_153820 Chrna1os Gm13705|Gm31264 cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), opposite strand ncRNA common_peak2_51_37_0.170555681438284_5.33320535416273_0.398838069828027-2 chr13 99385228 99385957 + 0.398838069828027 NA intron (NM_173757, intron 4 of 10) intron (NM_173757, intron 4 of 10) 27234 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027 chr1 71920137 71920743 + 0.398838069828027 NA Intergenic Intergenic 32328 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_51_37_0.170555681438284_5.33320535416273_0.398838069828027 chr10 91158736 91159464 + 0.398838069828027 NA intron (NM_001080129, intron 3 of 8) intron (NM_001080129, intron 3 of 8) 11450 NM_001283048 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_51_37_0.170555681438284_5.33320535416273_0.398838069828027-3 chr3 96629953 96630545 + 0.398838069828027 NA promoter-TSS (NR_003619) promoter-TSS (NR_003619) 321 NM_001102407 60365 Mm.261972 NM_025875 ENSMUSG00000038374 Rbm8a 2310057C03Rik|AA673428|Rbm8 RNA binding motif protein 8a protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-3 chr15 85036367 85036821 + 0.398838069828027 NA promoter-TSS (NM_133750) promoter-TSS (NM_133750) -468 NM_001356617 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-10 chr8 25304520 25304905 + 0.398838069828027 NA non-coding (NR_040352, exon 3 of 3) non-coding (NR_040352, exon 3 of 3) 1558 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-6 chr9 30427055 30427716 + 0.398838069828027 NA promoter-TSS (NM_028874) promoter-TSS (NM_028874) 56 NM_028874 102607 Mm.35084 NM_028874 ENSMUSG00000031993 Snx19 3526401K03Rik|AI195321|AI848208|mKIAA0254 sorting nexin 19 protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-3 chr14 61439082 61439879 + 0.398838069828027 NA intron (NM_008466, intron 1 of 16) CpG 467 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-6 chr2 121170505 121171120 + 0.398838069828027 NA promoter-TSS (NM_001290824) promoter-TSS (NM_001290824) 313 NM_001290819 99334 Mm.188422 NM_178889 ENSMUSG00000050619 Zscan29 AW125441|Zfp690 zinc finger SCAN domains 29 protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-8 chr9 92276580 92277263 + 0.398838069828027 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 1319 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_51_37_0.170555681438284_5.33320535416273_0.398838069828027-5 chr9 88438139 88438841 + 0.398838069828027 NA intron (NM_001359958, intron 1 of 28) intron (NM_001359958, intron 1 of 28) 461 NM_001359958 244962 Mm.439873 NM_172926 ENSMUSG00000032422 Snx14 B830022K16|C330035N22Rik|YR-14 sorting nexin 14 protein-coding common_peak1_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-4 chr3 121645366 121645932 + 0.398838069828027 NA intron (NR_036458, intron 1 of 2) intron (NR_036458, intron 1 of 2) 804 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027 chr12 21286478 21287171 + 0.398838069828027 NA promoter-TSS (NM_008403) promoter-TSS (NM_008403) 527 NM_018813 54451 Mm.356778 NM_018813 ENSMUSG00000054309 Cpsf3 - cleavage and polyadenylation specificity factor 3 protein-coding common_peak1_44_43_-0.248063471210713_5.33539988303194_0.398838069828027 chr12 55124547 55125023 + 0.398838069828027 NA intron (NM_028527, intron 1 of 4) CpG 257 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-2 chr13 54071899 54072489 + 0.398838069828027 NA intron (NM_027324, intron 1 of 10) CpG 349 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak1_51_37_0.170555681438284_5.33320535416273_0.398838069828027-6 chr5 142401650 142402656 + 0.398838069828027 NA intron (NM_199068, intron 1 of 8) intron (NM_199068, intron 1 of 8) 656 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-5 chr5 45520362 45520845 + 0.398838069828027 NA intron (NM_025895, intron 1 of 3) CpG 374 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding common_peak2_44_43_-0.248063471210713_5.33539988303194_0.398838069828027-8 chr4 86574949 86575502 + 0.398838069828027 NA promoter-TSS (NM_178376) promoter-TSS (NM_178376) -448 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding common_peak1_203_154_0.10043209514318_7.32634045284583_0.398769169232609 chr9 99628961 99631004 + 0.398769169232609 NA intron (NM_001311142, intron 1 of 15) CpG 404 NM_001311142 72507 Mm.221455 NM_028258 ENSMUSG00000037784 Dzip1l 2610524A10Rik|AI663976 DAZ interacting protein 1-like protein-coding common_peak1_157_140_-0.129038665696761_7.07503201955041_0.39873313218364 chr10 127667080 127668931 + 0.39873313218364 NA intron (NR_045171, intron 1 of 1) intron (NR_045171, intron 1 of 1) 882 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA common_peak2_61_58_-0.21219350980906_5.77654629445731_0.398713855155094 chr19 41932605 41933239 + 0.398713855155094 NA promoter-TSS (NM_023740) promoter-TSS (NM_023740) 392 NM_001164561 66583 Mm.289086 NM_025644 ENSMUSG00000034321 Exosc1 2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561 exosome component 1 protein-coding common_peak1_61_58_-0.21219350980906_5.77654629445731_0.398713855155094 chr11 79196788 79197524 + 0.398713855155094 NA Intergenic Intergenic 45868 NM_001042565 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak2_70_51_0.164181023565639_5.78253022992391_0.398713855155082 chr15 5536892 5537388 + 0.398713855155082 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 40822 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_70_51_0.164181023565639_5.78253022992391_0.398713855155082-2 chr2 72316910 72317723 + 0.398713855155082 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 31615 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_70_51_0.164181023565639_5.78253022992391_0.398713855155082-3 chr2 163602280 163602803 + 0.398713855155082 NA intron (NR_131225, intron 1 of 3) CpG 227 NR_131225 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding common_peak1_70_51_0.164181023565639_5.78253022992391_0.398713855155082 chr13 51852380 51853352 + 0.398713855155082 NA Intergenic Intergenic 6191 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_70_51_0.164181023565639_5.78253022992391_0.398713855155082-2 chr17 33919715 33920458 + 0.398713855155082 NA TTS (NM_020625) TTS (NM_020625) 608 NM_009318 21356 Mm.154457 NM_009318 ENSMUSG00000024308 Tapbp D17Wsu91e|TPN TAP binding protein protein-coding common_peak2_70_51_0.164181023565639_5.78253022992391_0.398713855155082-3 chr4 3777634 3778427 + 0.398713855155082 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 57625 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak2_223_195_-0.104175689043016_7.5626219995937_0.398391162375525 chr17 84084117 84085778 + 0.398391162375525 NA intron (NR_045458, intron 2 of 5) intron (NR_045458, intron 2 of 5) 6287 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_222_195_-0.110585171130992_7.55941725854971_0.398391162375525 chr17 84084089 84085752 + 0.398391162375525 NA intron (NR_045458, intron 2 of 5) intron (NR_045458, intron 2 of 5) 6260 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_115_86_0.124914545955294_6.50540076882637_0.398246468909489 chr15 101246597 101247616 + 0.398246468909489 NA Intergenic Intergenic -19740 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|NUR77-1|NUR77-2|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak2_104_95_-0.159825885521141_6.50504955796059_0.398246468909489 chr19 32757616 32758374 + 0.398246468909489 NA 5' UTR (NM_008960, exon 1 of 9) 5' UTR (NM_008960, exon 1 of 9) 418 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak2_172_130_0.107014038329405_7.08693002070215_0.3980116779363 chr3 121814552 121815993 + 0.3980116779363 NA promoter-TSS (NM_001355756) promoter-TSS (NM_001355756) 30 NM_008991 19299 Mm.399042 NM_008991 ENSMUSG00000028127 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding common_peak1_158_141_-0.130196441580611_7.08464889871438_0.3980116779363 chr14 70577781 70579032 + 0.3980116779363 NA 5' UTR (NM_001360474, exon 1 of 3) 5' UTR (NM_001360474, exon 1 of 3) 307 NM_001360474 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding common_peak1_142_107_0.112731051097665_6.8112530277123_0.398002954161618 chr3 101571977 101573123 + 0.398002954161618 NA Intergenic Intergenic 32157 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_130_117_-0.140580740919451_6.81235267890212_0.398002954161618 chr19 10136520 10137559 + 0.398002954161618 NA Intergenic Intergenic -35536 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-17 chr5 66550924 66551134 + 0.397739447719386 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 67788 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-18 chr7 139250860 139251274 + 0.397739447719386 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 2585 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-11 chr17 64600828 64601101 + 0.397739447719386 NA promoter-TSS (NM_008549) promoter-TSS (NM_008549) -685 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding common_peak1_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-4 chr2 126310535 126310814 + 0.397739447719386 NA Intergenic Intergenic 158533 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-7 chr3 40799637 40799968 + 0.397739447719386 NA promoter-TSS (NM_173169) promoter-TSS (NM_173169) -149 NM_173169 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo like kinase 4 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386 chr1 172216892 172217181 + 0.397739447719386 NA intron (NM_009813, intron 2 of 10) intron (NM_009813, intron 2 of 10) 2859 NM_009813 12372 Mm.12829 NM_009813 ENSMUSG00000007122 Casq1 CSQ|CSQ-1|CSQ1|sCSQ calsequestrin 1 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-3 chr10 80947443 80947738 + 0.397739447719386 NA Intergenic Intergenic 17499 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-7 chr13 32801444 32801842 + 0.397739447719386 NA promoter-TSS (NM_030215) promoter-TSS (NM_030215) -387 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-12 chr6 97510668 97511103 + 0.397739447719386 NA intron (NM_145148, intron 2 of 23) intron (NM_145148, intron 2 of 23) -23065 NM_001346637 232288 Mm.27789 NM_145148 ENSMUSG00000030064 Frmd4b 6030440G05Rik|C87375|GOBLIN|GRSP1|R74720 FERM domain containing 4B protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-2 chr10 62340250 62340540 + 0.397739447719386 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 26 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-6 chr12 80379328 80379686 + 0.397739447719386 NA intron (NM_177267, intron 5 of 8) intron (NM_177267, intron 5 of 8) 12170 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-13 chr7 35118718 35119040 + 0.397739447719386 NA promoter-TSS (NM_001287523) promoter-TSS (NM_001287523) -414 NM_001287521 12606 Mm.349667 NM_007678 ENSMUSG00000034957 Cebpa C/ebpalpha|CBF-A|Cebp CCAAT/enhancer binding protein (C/EBP), alpha protein-coding common_peak1_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-2 chr15 84224066 84224311 + 0.397739447719386 NA Intergenic Intergenic -7855 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386 chr1 71650426 71650749 + 0.397739447719386 NA exon (NM_001276410, exon 3 of 44) exon (NM_001276410, exon 3 of 44) 2647 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak1_18_20_-0.416098988660369_4.18426792844858_0.397739447719386 chr10 31313438 31313743 + 0.397739447719386 NA intron (NM_027168, intron 1 of 5) CpG 185 NM_027168 69692 Mm.245537 NM_027168 ENSMUSG00000000295 Hddc2 2310057G13Rik HD domain containing 2 protein-coding unique_peak1_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-2 chr5 113633022 113633361 + 0.397739447719386 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 10412 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-5 chr18 67981311 67981512 + 0.397739447719386 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 48238 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-3 chr2 18927797 18928322 + 0.397739447719386 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 70062 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-10 chr3 135212105 135212432 + 0.397739447719386 NA promoter-TSS (NM_173762) promoter-TSS (NM_173762) -295 NM_173762 229841 Mm.161470 NM_173762 ENSMUSG00000045328 Cenpe 312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10 centromere protein E protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-15 chr3 151331828 151332171 + 0.397739447719386 NA Intergenic Intergenic -105883 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-12 chr2 11777273 11777521 + 0.397739447719386 NA promoter-TSS (NM_177268) promoter-TSS (NM_177268) 188 NM_001348234 50755 Mm.24088 NM_015792 ENSMUSG00000058594 Fbxo18 AU015756|Fbh1|Fbx18 F-box protein 18 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-8 chr13 54789520 54789778 + 0.397739447719386 NA exon (NM_028841, exon 1 of 8) exon (NM_028841, exon 1 of 8) 244 NM_028841 74257 Mm.32883 NM_028841 ENSMUSG00000025875 Tspan17 2210021G21Rik|AI047581|Fbxo23|Tm4sf17 tetraspanin 17 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-8 chr3 119509558 119509787 + 0.397739447719386 NA Intergenic Intergenic 273716 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-4 chr10 79532880 79533121 + 0.397739447719386 NA intron (NM_001302389, intron 1 of 5) intron (NM_001302389, intron 1 of 5) 787 NM_001302442 50784 Mm.28873 NM_015817 ENSMUSG00000052151 Plpp2 Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c phospholipid phosphatase 2 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-4 chr11 4293291 4293731 + 0.397739447719386 NA Intergenic Intergenic 26715 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-11 chr5 113634614 113634920 + 0.397739447719386 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 8836 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-14 chr3 121643188 121643558 + 0.397739447719386 NA non-coding (NR_036456, exon 1 of 4) non-coding (NR_036456, exon 1 of 4) 112 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-16 chr5 36988596 36988878 + 0.397739447719386 NA intron (NM_011716, intron 1 of 7) CpG 245 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-14 chr7 90333061 90333522 + 0.397739447719386 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 30936 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-3 chr10 24587733 24587975 + 0.397739447719386 NA Intergenic Intergenic -7588 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-10 chr16 75766429 75766641 + 0.397739447719386 NA intron (NR_027492, intron 1 of 5) intron (NR_027492, intron 1 of 5) 283 NR_027492 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-6 chr2 27323507 27324093 + 0.397739447719386 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -76497 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-15 chr7 128538293 128538615 + 0.397739447719386 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 14871 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-2 chr1 132320400 132320965 + 0.397739447719386 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 4557 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_18_20_-0.416098988660369_4.18426792844858_0.397739447719386 chr15 100421621 100421958 + 0.397739447719386 NA intron (NM_008732, intron 1 of 16) B1F2|SINE|Alu 1266 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-13 chr2 108622491 108622705 + 0.397739447719386 NA Intergenic Intergenic 655692 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-9 chr16 30519011 30519443 + 0.397739447719386 NA intron (NM_001357415, intron 10 of 11) intron (NM_001357415, intron 10 of 11) 31351 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-9 chr3 121663749 121664113 + 0.397739447719386 NA Intergenic Intergenic -6832 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-5 chr10 111937556 111937986 + 0.397739447719386 NA Intergenic Intergenic -34924 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-19 chr8 11385663 11385974 + 0.397739447719386 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -72992 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_18_20_-0.416098988660369_4.18426792844858_0.397739447719386-20 chrX 75416042 75416449 + 0.397739447719386 NA promoter-TSS (NM_001166457) promoter-TSS (NM_001166457) 339 NM_010839 105886298 Mm.16366 NM_010839 ENSMUSG00000090110 Cmc4 Mtcp1nb|p8MTCP1 C-x(9)-C motif containing 4 protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-2 chr1 134651955 134652331 + 0.397739447719379 NA intron (NM_009307, intron 1 of 9) intron (NM_009307, intron 1 of 9) 5531 NM_009307 20980 Mm.5102 NM_009307 ENSMUSG00000026452 Syt2 IP4BP|R74640|mKIAA4194|sytII synaptotagmin II protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-12 chr7 97696783 97697005 + 0.397739447719379 NA promoter-TSS (NR_154552) promoter-TSS (NR_154552) 237 NM_023671 12729 Mm.21482 NM_023671 ENSMUSG00000025439 Clns1a 2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN chloride channel, nucleotide-sensitive, 1A protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-8 chr2 60729271 60729607 + 0.397739447719379 NA Intergenic Intergenic -6836 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-9 chr3 139075637 139075866 + 0.397739447719379 NA promoter-TSS (NM_001040690) promoter-TSS (NM_001040690) -550 NM_001356388 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-3 chr11 31672116 31672493 + 0.397739447719379 NA promoter-TSS (NM_001024919) promoter-TSS (NM_001024919) -442 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-2 chr15 6256816 6257080 + 0.397739447719379 NA Intergenic Intergenic -42841 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-12 chr5 135632701 135632973 + 0.397739447719379 NA exon (NM_146002, exon 1 of 4) exon (NM_146002, exon 1 of 4) 183 NM_146002 215160 Mm.295438 NM_031398 ENSMUSG00000039917 Rhbdd2 0610011L13Rik|AI480532|Rhbdl7|Usmg1 rhomboid domain containing 2 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-5 chr19 7483588 7483828 + 0.397739447719379 NA promoter-TSS (NM_001271487) promoter-TSS (NM_001271487) -417 NM_001003934 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-7 chr18 11883821 11884273 + 0.397739447719379 NA intron (NM_022021, intron 2 of 8) (CCCCCA)n|Simple_repeat|Simple_repeat -43609 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-16 chr8 94037384 94037599 + 0.397739447719379 NA promoter-TSS (NM_026623) promoter-TSS (NM_026623) 293 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-11 chr5 31635079 31635384 + 0.397739447719379 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 21280 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-2 chr12 50545261 50545474 + 0.397739447719379 NA intron (NM_008858, intron 1 of 18) intron (NM_008858, intron 1 of 18) 103856 NM_008858 18760 Mm.133719 NM_008858 ENSMUSG00000002688 Prkd1 PKD|PKD1|Pkcm|Prkcm protein kinase D1 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-15 chrX 12087156 12087452 + 0.397739447719379 NA intron (NM_001168321, intron 1 of 13) CpG -6751 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379 chr11 31718715 31719017 + 0.397739447719379 NA Intergenic Intergenic -47004 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding unique_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379 chr1 92270257 92270552 + 0.397739447719379 NA Intergenic Intergenic -90063 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-19 chr9 120738637 120738918 + 0.397739447719379 NA Intergenic Intergenic 161446 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-8 chr3 58314961 58315268 + 0.397739447719379 NA Intergenic Intergenic -99606 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-3 chr13 28931461 28931775 + 0.397739447719379 NA Intergenic Intergenic 22081 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-9 chr2 117597850 117598109 + 0.397739447719379 NA Intergenic Intergenic 214823 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-14 chr8 108765993 108766352 + 0.397739447719379 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 51528 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-7 chr17 87171809 87172085 + 0.397739447719379 NA Intergenic Intergenic 22995 NR_046016 399626 Mm.396062 NR_046016 C330024C12Rik - RIKEN cDNA C330024C12 gene ncRNA unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-11 chr7 97511573 97511958 + 0.397739447719379 NA intron (NM_001358012, intron 11 of 22) intron (NM_001358012, intron 11 of 22) 30809 NM_001358012 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-4 chr14 28510816 28511113 + 0.397739447719379 NA promoter-TSS (NM_001256224) promoter-TSS (NM_001256224) -441 NM_001256224 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379 chr11 115535561 115535772 + 0.397739447719379 NA intron (NM_133354, intron 1 of 3) CpG 564 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-3 chr15 61988608 61988812 + 0.397739447719379 NA intron (NM_001177352, intron 2 of 2) intron (NM_001177352, intron 2 of 2) 3369 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-13 chr7 29518242 29518470 + 0.397739447719379 NA Intergenic CpG -12896 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-5 chr16 8737998 8738269 + 0.397739447719379 NA intron (NM_001003918, intron 1 of 30) CpG 209 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-13 chr6 42354764 42355109 + 0.397739447719379 NA intron (NM_001289618, intron 4 of 9) intron (NM_001289618, intron 4 of 9) 5108 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-17 chr8 114133929 114134189 + 0.397739447719379 NA 5' UTR (NM_001290181, exon 1 of 4) 5' UTR (NM_001290181, exon 1 of 4) 485 NM_024437 67528 Mm.27889 NM_024437 ENSMUSG00000031767 Nudt7 1300007B24Rik|2210404C19Rik nudix (nucleoside diphosphate linked moiety X)-type motif 7 protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-6 chr17 33358415 33358743 + 0.397739447719379 NA intron (NM_207541, intron 1 of 3) CpG 299 NM_207541 224694 Mm.170029 NM_207541 ENSMUSG00000003929 Zfp81 AA409460|AA409461|C330034P10Rik|D330034E10Rik|Hszfp36|KRAB13|Zfp78 zinc finger protein 81 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-6 chr19 41673309 41673563 + 0.397739447719379 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 70420 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-15 chr8 79097395 79097792 + 0.397739447719379 NA intron (NM_001294279, intron 5 of 14) B1_Mur2|SINE|Alu 69156 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-12 chr4 155176490 155177005 + 0.397739447719379 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 45788 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-18 chr9 57625362 57625663 + 0.397739447719379 NA Intergenic Intergenic -4738 NM_199222 235416 Mm.295630 NM_199222 ENSMUSG00000056271 Lman1l BC020188|slamp lectin, mannose-binding 1 like protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-6 chr17 42938888 42939087 + 0.397739447719379 NA Intergenic Intergenic -62563 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379 chr1 82587068 82587580 + 0.397739447719379 NA promoter-TSS (NM_007735) promoter-TSS (NM_007735) 403 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-8 chr2 71546063 71546399 + 0.397739447719379 NA exon (NM_010054, exon 1 of 3) exon (NM_010054, exon 1 of 3) 523 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-4 chr14 46956119 46956458 + 0.397739447719379 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -1360 NR_105813 102465206 NR_105813 ENSMUSG00000099036 Mir378c Gm27930|mmu-mir-378c microRNA 378c ncRNA unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-10 chr6 31123657 31123923 + 0.397739447719379 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -60697 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-4 chr18 61954672 61954910 + 0.397739447719379 NA intron (NM_172628, intron 1 of 16) intron (NM_172628, intron 1 of 16) 1716 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-11 chr3 159884902 159885287 + 0.397739447719379 NA intron (NM_001356350, intron 2 of 12) intron (NM_001356350, intron 2 of 12) 45444 NM_001356350 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|EVI|Gpr177 wntless WNT ligand secretion mediator protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-7 chr19 47220581 47220893 + 0.397739447719379 NA intron (NM_021360, intron 1 of 5) intron (NM_021360, intron 1 of 5) -8106 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-10 chr4 45475961 45476401 + 0.397739447719379 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 54647 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_23_16_0.22341280519491_4.19916924384779_0.397739447719379-14 chr6 100721024 100721314 + 0.397739447719379 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 16435 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-9 chr5 3151705 3152036 + 0.397739447719379 NA Intergenic Intergenic -192023 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-10 chr3 122322076 122322384 + 0.397739447719379 NA Intergenic Intergenic -28527 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA unique_peak1_23_16_0.22341280519491_4.19916924384779_0.397739447719379-5 chr14 69393278 69393855 + 0.397739447719379 NA Intergenic Intergenic 56415 NM_001359160 100862375 Mm.489765 NM_001359159 ENSMUSG00000022066 Entpd4b Gm21685 ectonucleoside triphosphate diphosphohydrolase 4B protein-coding common_peak1_92_68_0.142760685002068_6.1799047992792_0.39758958692552-2 chr19 46044636 46045641 + 0.39758958692552 NA 5' UTR (NM_001113408, exon 1 of 11) 5' UTR (NM_001113408, exon 1 of 11) 173 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_92_68_0.142760685002068_6.1799047992792_0.39758958692552 chr1 171113513 171114513 + 0.39758958692552 NA Intergenic Intergenic -7648 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak1_82_76_-0.178462919803983_6.17755508079291_0.39758958692552 chr2 152735331 152736067 + 0.39758958692552 NA promoter-TSS (NM_010495) promoter-TSS (NM_010495) -552 NM_010495 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak1_92_68_0.142760685002068_6.1799047992792_0.39758958692552-3 chr7 58658261 58659066 + 0.39758958692552 NA exon (NM_009728, exon 1 of 21) exon (NM_009728, exon 1 of 21) 461 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_92_68_0.142760685002068_6.1799047992792_0.39758958692552 chr11 102318396 102318961 + 0.39758958692552 NA intron (NM_011551, intron 1 of 20) CpG-2669 418 NM_001302955 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak2_82_76_-0.178462919803983_6.17755508079291_0.39758958692552 chr5 127616325 127617362 + 0.39758958692552 NA exon (NM_133895, exon 1 of 8) exon (NM_133895, exon 1 of 8) 549 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak1_82_76_-0.178462919803983_6.17755508079291_0.39758958692552-2 chr7 49249092 49249806 + 0.39758958692552 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 3260 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_279_214_0.0819982042366112_7.78919195170777_0.397337639675478 chr15 83148173 83149736 + 0.397337639675478 NA promoter-TSS (NR_004432) promoter-TSS (NR_004432) 424 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak2_105_96_-0.161197766490512_6.51931395894187_0.397183131122319-2 chr11 75486841 75487796 + 0.397183131122319 NA intron (NM_138659, intron 1 of 41) intron (NM_138659, intron 1 of 41) 541 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding common_peak1_105_96_-0.161197766490512_6.51931395894187_0.397183131122319 chr3 53107978 53109917 + 0.397183131122319 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 67400 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_105_96_-0.161197766490512_6.51931395894187_0.397183131122319-2 chr9 56107870 56108752 + 0.397183131122319 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 18335 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_105_96_-0.161197766490512_6.51931395894187_0.397183131122319-3 chr7 135604901 135606404 + 0.397183131122319 NA promoter-TSS (NM_001316679) promoter-TSS (NM_001316679) -176 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_105_96_-0.161197766490512_6.51931395894187_0.397183131122319 chr1 91398079 91399253 + 0.397183131122319 NA exon (NM_023343, exon 1 of 12) exon (NM_023343, exon 1 of 12) 157 NM_023343 67444 Mm.337240 NM_023343 ENSMUSG00000026309 Ilkap 0710007A14Rik|1600009O09Rik|PP2C-DELTA integrin-linked kinase-associated serine/threonine phosphatase 2C protein-coding common_peak1_117_87_0.132914487112138_6.52588886219337_0.397183131122294 chr3 131489988 131491062 + 0.397183131122294 NA Intergenic CpG -74243 NM_001289479 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding common_peak2_116_87_0.120722780699481_6.51979300898704_0.397183131122294-2 chr18 60612388 60613350 + 0.397183131122294 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) -2765 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_116_87_0.120722780699481_6.51979300898704_0.397183131122294 chr11 75732975 75733791 + 0.397183131122294 NA intron (NM_009536, intron 1 of 5) CpG 496 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding common_peak1_116_87_0.120722780699481_6.51979300898704_0.397183131122294 chr5 124482936 124483953 + 0.397183131122294 NA intron (NM_029532, intron 1 of 1) CpG 289 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak1_131_118_-0.141861738056674_6.82388689427961_0.397144223124522 chr9 31280537 31281593 + 0.397144223124522 NA Intergenic CpG 9664 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak1_207_157_0.100592487558278_7.35407699195624_0.396969467934187-2 chr7 100977404 100979920 + 0.396969467934187 NA Intergenic Intergenic -14296 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak1_207_157_0.100592487558278_7.35407699195624_0.396969467934187 chr15 85670903 85672382 + 0.396969467934187 NA Intergenic CpG -32131 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_192_169_-0.11223856566751_7.35327165330395_0.396969467934138 chr18 73572851 73574226 + 0.396969467934138 NA exon (NM_001039214, exon 1 of 2) exon (NM_001039214, exon 1 of 2) 833 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_192_169_-0.11223856566751_7.35327165330395_0.396969467934138 chr3 88685415 88686890 + 0.396969467934138 NA intron (NR_151827, intron 1 of 13) CpG 365 NR_151827 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Khdc4|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak2_62_59_-0.213520297361685_5.80013044692768_0.39695142494299-3 chr7 109671134 109671913 + 0.39695142494299 NA Intergenic Intergenic -32214 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding common_peak1_62_59_-0.213520297361685_5.80013044692768_0.39695142494299-2 chr5 77371978 77372808 + 0.39695142494299 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 35652 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_71_52_0.156735814536262_5.80628836183133_0.39695142494299-3 chr5 24164968 24165799 + 0.39695142494299 NA intron (NM_153092, intron 1 of 6) intron (NM_153092, intron 1 of 6) 420 NM_001346582 231042 Mm.45513 NM_153092 ENSMUSG00000048439 Nupl2 AV116043|CG1|NLP-1|Nlp1 nucleoporin like 2 protein-coding common_peak2_62_59_-0.213520297361685_5.80013044692768_0.39695142494299-2 chr7 109547701 109548707 + 0.39695142494299 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 28072 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_71_52_0.156735814536262_5.80628836183133_0.39695142494299 chr12 55820303 55821099 + 0.39695142494299 NA exon (NM_019994, exon 1 of 41) exon (NM_019994, exon 1 of 41) 815 NM_019994 56784 Mm.292180 NM_019994 ENSMUSG00000021027 Ralgapa1 2310003F20Rik|4930400K19Rik|AI563624|GRIPE|Garnl1|Tulip1|mKIAA0884 Ral GTPase activating protein, alpha subunit 1 protein-coding common_peak1_71_52_0.156735814536262_5.80628836183133_0.39695142494299-4 chr9 55208514 55209510 + 0.39695142494299 NA promoter-TSS (NM_028049) promoter-TSS (NM_028049) 77 NM_028049 71999 Mm.276429 NM_028049 ENSMUSG00000032309 Fbxo22 0610033L19Rik|1600016C16Rik F-box protein 22 protein-coding common_peak1_71_52_0.156735814536262_5.80628836183133_0.39695142494299 chr2 154603237 154603663 + 0.39695142494299 NA intron (NM_021534, intron 1 of 3) intron (NM_021534, intron 1 of 3) 223 NM_021534 59038 Mm.24673 NM_021534 ENSMUSG00000000876 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 protein-coding common_peak1_71_52_0.156735814536262_5.80628836183133_0.39695142494299-2 chr3 102995422 102996160 + 0.39695142494299 NA promoter-TSS (NM_025679) promoter-TSS (NM_025679) 51 NM_025679 66641 Mm.33937 NM_025679 ENSMUSG00000027854 Sike1 2810005O12Rik|5730470L24Rik|AI450236|AI839862|Sike|Sikeb suppressor of IKBKE 1 protein-coding common_peak2_62_59_-0.213520297361685_5.80013044692768_0.39695142494299-4 chr9 67040811 67041958 + 0.39695142494299 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) 2487 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak1_71_52_0.156735814536262_5.80628836183133_0.39695142494299 chr9 95406414 95407805 + 0.39695142494299 NA 5' UTR (NM_018763, exon 1 of 2) 5' UTR (NM_018763, exon 1 of 2) 161 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding unique_peak2_62_59_-0.213520297361685_5.80013044692768_0.39695142494299 chr1 195241648 195241867 + 0.39695142494299 NA Intergenic CpG -65042 NM_007758 12902 Mm.235387 NM_007758 ENSMUSG00000026616 Cr2 C3DR|CD21|CD35|Cr-1|Cr-2|Cr1 complement receptor 2 protein-coding common_peak1_62_59_-0.213520297361685_5.80013044692768_0.39695142494299 chr11 76494130 76494928 + 0.39695142494299 NA promoter-TSS (NM_001346670) promoter-TSS (NM_001346670) -34 NM_001346670 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_62_59_-0.213520297361685_5.80013044692768_0.39695142494299 chr11 106215569 106216277 + 0.39695142494299 NA intron (NM_026009, intron 1 of 12) intron (NM_026009, intron 1 of 12) 444 NM_026009 67163 Mm.22109 NM_026009 ENSMUSG00000078622 Ccdc47 2610204L23Rik|C88307|asp4|calumin coiled-coil domain containing 47 protein-coding common_peak1_161_143_-0.123597527887942_7.10812623749834_0.396600276612485 chr4 83323245 83324657 + 0.396600276612485 NA intron (NM_027238, intron 1 of 19) CpG 238 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702 chr7 44849189 44849651 + 0.396448181476702 NA promoter-TSS (NM_001253920) promoter-TSS (NM_001253920) 196 NM_026270 67605 Mm.148007 NM_026270 ENSMUSG00000011096 Akt1s1 1110012J22Rik|AI227026|Lobe|Lobel|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-9 chr5 124351573 124352226 + 0.396448181476702 NA intron (NM_013812, intron 1 of 3) MIR3|SINE|MIR 2729 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702 chr11 116130415 116131233 + 0.396448181476702 NA TTS (NM_024177) TTS (NM_024177) 304 NM_178802 338364 Mm.439976 NM_178802 ENSMUSG00000054517 Trim65 4732463G12Rik tripartite motif-containing 65 protein-coding common_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702-6 chr2 131903103 131903558 + 0.396448181476702 NA Intergenic Intergenic -6598 NM_011170 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding common_peak2_52_38_0.160367836407612_5.36558613706605_0.396448181476702-3 chr8 71681965 71682256 + 0.396448181476702 NA exon (NM_010589, exon 11 of 25) exon (NM_010589, exon 11 of 25) 5727 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding common_peak2_52_38_0.160367836407612_5.36558613706605_0.396448181476702-5 chr8 122172629 122172958 + 0.396448181476702 NA Intergenic Intergenic -109348 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_52_38_0.160367836407612_5.36558613706605_0.396448181476702-2 chr19 41476131 41476623 + 0.396448181476702 NA Intergenic Intergenic -48875 NM_001326287 627352 Mm.395111 NM_001326287 Morf4l1b EG627352|Gm6747 mortality factor 4 like 1B protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-4 chr19 6084402 6084929 + 0.396448181476702 NA promoter-TSS (NM_026410) promoter-TSS (NM_026410) 310 NM_001356994 81909 Mm.289471 NM_024231 ENSMUSG00000024792 Zfpl1 - zinc finger like protein 1 protein-coding common_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702-5 chr2 60689988 60690604 + 0.396448181476702 NA intron (NM_001159564, intron 1 of 17) (CA)n|Simple_repeat|Simple_repeat -16603 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-3 chr18 31609509 31609904 + 0.396448181476702 NA exon (NM_026165, exon 1 of 8) exon (NM_026165, exon 1 of 8) 224 NM_026165 67453 Mm.23896 NM_026165 ENSMUSG00000024259 Slc25a46 1200007B05Rik|AI325987 solute carrier family 25, member 46 protein-coding common_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702-4 chr15 80916662 80917091 + 0.396448181476702 NA intron (NM_177124, intron 16 of 21) intron (NM_177124, intron 16 of 21) -23163 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702 chr1 178187738 178188288 + 0.396448181476702 NA intron (NM_024282, intron 1 of 4) CpG 596 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding common_peak1_45_44_-0.24899979453342_5.36735319906296_0.396448181476702-4 chr4 129334745 129335206 + 0.396448181476702 NA intron (NM_009030, intron 1 of 11) CpG 395 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4, chromatin remodeling factor protein-coding common_peak2_52_38_0.160367836407612_5.36558613706605_0.396448181476702-4 chr8 95886756 95887225 + 0.396448181476702 NA intron (NM_010325, intron 1 of 9) intron (NM_010325, intron 1 of 9) 1375 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding common_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702-3 chr15 79402651 79403160 + 0.396448181476702 NA promoter-TSS (NM_001253817) promoter-TSS (NM_001253817) 14 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-2 chr15 79670879 79671331 + 0.396448181476702 NA intron (NM_172609, intron 1 of 3) CpG 237 NM_172609 223696 Mm.246435 NM_172609 ENSMUSG00000022427 Tomm22 2310047D01|Tom22 translocase of outer mitochondrial membrane 22 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-8 chr4 59314338 59315117 + 0.396448181476702 NA TTS (NM_001163288) TTS (NM_001163288) 54676 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_53_38_0.187144632037911_5.3789745348812_0.396448181476702-3 chr3 98024912 98025471 + 0.396448181476702 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 11653 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_53_38_0.187144632037911_5.3789745348812_0.396448181476702-2 chr2 29889899 29890440 + 0.396448181476702 NA 5' UTR (NM_013615, exon 1 of 17) 5' UTR (NM_013615, exon 1 of 17) 106 NM_013615 18286 Mm.330116 NM_013615 ENSMUSG00000026790 Odf2 AI848335|MMTEST29 outer dense fiber of sperm tails 2 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-12 chr6 100710590 100711148 + 0.396448181476702 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 6135 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak2_53_38_0.187144632037911_5.3789745348812_0.396448181476702-4 chr4 130001948 130002408 + 0.396448181476702 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 10124 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-10 chr6 11925650 11926345 + 0.396448181476702 NA 5' UTR (NM_029404, exon 1 of 17) 5' UTR (NM_029404, exon 1 of 17) 116 NM_001168382 75725 Mm.212411 NM_029404 ENSMUSG00000029629 Phf14 1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783 PHD finger protein 14 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-7 chr3 135675070 135675798 + 0.396448181476702 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 16113 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_45_44_-0.24899979453342_5.36735319906296_0.396448181476702 chr10 127030479 127030847 + 0.396448181476702 NA intron (NM_025537, intron 1 of 5) CpG 151 NM_025537 66399 Mm.29900 NM_025537 ENSMUSG00000040521 Tsfm 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt Ts translation elongation factor, mitochondrial protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-6 chr2 126301497 126302144 + 0.396448181476702 NA Intergenic Intergenic 149679 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_45_44_-0.24899979453342_5.36735319906296_0.396448181476702-2 chr16 34751295 34751841 + 0.396448181476702 NA Intergenic Intergenic -33382 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak2_53_38_0.187144632037911_5.3789745348812_0.396448181476702 chr10 68237360 68238082 + 0.396448181476702 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 41005 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_53_38_0.187144632037911_5.3789745348812_0.396448181476702-5 chr7 74376069 74376751 + 0.396448181476702 NA intron (NM_001038643, intron 2 of 10) intron (NM_001038643, intron 2 of 10) 178370 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_45_44_-0.24899979453342_5.36735319906296_0.396448181476702 chr15 31246962 31247727 + 0.396448181476702 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 22959 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_45_44_-0.24899979453342_5.36735319906296_0.396448181476702-2 chr16 30599639 30600227 + 0.396448181476702 NA 5' UTR (NM_177632, exon 1 of 1) 5' UTR (NM_177632, exon 1 of 1) 210 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding unique_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702 chr17 5491661 5492408 + 0.396448181476702 NA promoter-TSS (NM_146073) promoter-TSS (NM_146073) -566 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak2_52_38_0.160367836407612_5.36558613706605_0.396448181476702 chr11 100290593 100291200 + 0.396448181476702 NA Intergenic Intergenic -21025 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding common_peak1_53_38_0.187144632037911_5.3789745348812_0.396448181476702-2 chr12 84175410 84176255 + 0.396448181476702 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 18183 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-5 chr2 71055781 71056375 + 0.396448181476702 NA promoter-TSS (NM_145524) promoter-TSS (NM_145524) 334 NM_001165980 75763 Mm.281668 NM_198005 ENSMUSG00000041966 Dcaf17 2810055O12Rik|4833418A01Rik|A030004A10Rik|A930009G19Rik|AI448937 DDB1 and CUL4 associated factor 17 protein-coding common_peak1_52_38_0.160367836407612_5.36558613706605_0.396448181476702-11 chr6 83165761 83166356 + 0.396448181476702 NA intron (NM_001198867, intron 1 of 27) CpG 134 NM_001198867 13191 Mm.6919 NM_007835 ENSMUSG00000031865 Dctn1 AL022633|DAP-150|DP-150|Glued|p150|p150-glued|p150 dynactin 1 protein-coding common_peak1_45_44_-0.24899979453342_5.36735319906296_0.396448181476702-3 chr16 92399367 92399993 + 0.396448181476702 NA intron (NM_001081549, intron 1 of 3) intron (NM_001081549, intron 1 of 3) 398 NM_019466 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-11 chr8 13889890 13890177 + 0.396392531282615 NA intron (NM_001359059, intron 1 of 2) CpG 238 NM_001359059 66423 Mm.29063 NM_025556 ENSMUSG00000031458 Coprs 1700029I03Rik|2410022L05Rik|AA409325|AI256813|C85432|Copr5 coordinator of PRMT5, differentiation stimulator protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-12 chr4 57568242 57568597 + 0.396392531282615 NA intron (NM_001304544, intron 1 of 8) intron (NM_001304544, intron 1 of 8) 171 NM_172868 242481 Mm.331630 NM_172868 ENSMUSG00000090053 Palm2 53-H12|B130066I24|R75368|pEN70 paralemmin 2 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-3 chr1 130733351 130733741 + 0.396392531282615 NA intron (NM_177604, intron 1 of 3) intron (NM_177604, intron 1 of 3) 1570 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-9 chr2 32693724 32694083 + 0.396392531282615 NA intron (NM_010236, intron 1 of 14) CpG 272 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-19 chr8 36028562 36029004 + 0.396392531282615 NA Intergenic Intergenic -66045 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-7 chr19 45646450 45647055 + 0.396392531282615 NA intron (NM_013907, intron 1 of 8) intron (NM_013907, intron 1 of 8) 13441 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-4 chr13 19395270 19395703 + 0.396392531282615 NA intron (NM_001347485, intron 1 of 7) CpG 327 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-3 chr15 82338516 82338777 + 0.396392531282615 NA intron (NM_001355546, intron 1 of 8) intron (NM_001355546, intron 1 of 8) 180 NM_001355546 17939 Mm.20325 NM_008669 ENSMUSG00000022453 Naga - N-acetyl galactosaminidase, alpha protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-8 chr19 46529211 46529679 + 0.396392531282615 NA Intergenic Intergenic 27797 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-6 chr19 4478137 4478419 + 0.396392531282615 NA Intergenic Intergenic -1135 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-5 chr2 113368194 113368738 + 0.396392531282615 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 40730 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615 chr6 49319355 49319767 + 0.396392531282615 NA intron (NM_001311112, intron 1 of 3) CpG 287 NM_001311112 57895 Mm.32416 NM_175098 ENSMUSG00000050786 Ccdc126 6330407D12Rik|AA675040|AI465320|AL022711 coiled-coil domain containing 126 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-2 chr1 161735230 161735454 + 0.396392531282615 NA Intergenic Intergenic 53153 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_37_26_0.214275952381679_4.86202547835431_0.396392531282615 chr1 45625563 45625882 + 0.396392531282615 NA Intergenic Intergenic -122440 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-6 chr2 135863130 135863620 + 0.396392531282615 NA intron (NM_001355156, intron 3 of 37) intron (NM_001355156, intron 3 of 37) 98537 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-13 chr4 106910799 106911333 + 0.396392531282615 NA promoter-TSS (NM_023672) promoter-TSS (NM_023672) -404 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-10 chr7 130519093 130519304 + 0.396392531282615 NA intron (NM_001271343, intron 1 of 11) CpG 382 NM_001136054 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding common_peak2_37_26_0.214275952381679_4.86202547835431_0.396392531282615-3 chr17 46274588 46275007 + 0.396392531282615 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 8229 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-5 chr13 59942552 59942936 + 0.396392531282615 NA Intergenic Intergenic -86967 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-8 chr6 85349608 85349912 + 0.396392531282615 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) -13387 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-5 chr18 60607250 60607950 + 0.396392531282615 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 2504 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-11 chr4 45012895 45013231 + 0.396392531282615 NA promoter-TSS (NM_001163284) promoter-TSS (NM_001163284) -651 NM_173399 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-7 chr4 137449678 137450032 + 0.396392531282615 NA Intergenic Intergenic -3441 NM_027063 69380 Mm.272519 NM_027063 ENSMUSG00000041399 1700013G24Rik AI507018 RIKEN cDNA 1700013G24 gene protein-coding common_peak2_37_26_0.214275952381679_4.86202547835431_0.396392531282615-4 chr4 11322303 11322537 + 0.396392531282615 NA promoter-TSS (NM_001081201) promoter-TSS (NM_001081201) -289 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-18 chr7 112305258 112306057 + 0.396392531282615 NA intron (NM_001193305, intron 4 of 25) intron (NM_001193305, intron 4 of 25) -62651 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding unique_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-2 chr8 126767727 126768239 + 0.396392531282615 NA Intergenic Intergenic -81037 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-4 chr17 25757207 25757608 + 0.396392531282615 NA Intergenic Intergenic -3029 NM_001356286 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-6 chr13 91911501 91912062 + 0.396392531282615 NA intron (NM_009027, intron 6 of 14) intron (NM_009027, intron 6 of 14) -34896 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding common_peak2_37_26_0.214275952381679_4.86202547835431_0.396392531282615-2 chr12 70111504 70111923 + 0.396392531282615 NA promoter-TSS (NR_104398) promoter-TSS (NR_104398) -84 NR_104398 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615 chr10 81233438 81233978 + 0.396392531282615 NA intron (NM_001034895, intron 1 of 17) intron (NM_001034895, intron 1 of 17) 545 NM_001034895 103406 Mm.158783 NM_001034895 ENSMUSG00000034949 Zfr2 2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086 zinc finger RNA binding protein 2 protein-coding unique_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-3 chr9 43226817 43227219 + 0.396392531282615 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 12798 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-16 chr6 85349589 85349919 + 0.396392531282615 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) -13381 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-3 chr13 23423422 23423837 + 0.396392531282615 NA exon (NM_013924, exon 1 of 3) exon (NM_013924, exon 1 of 3) 237 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615 chr1 5019500 5019964 + 0.396392531282615 NA promoter-TSS (NM_001290372) promoter-TSS (NM_001290372) -193 NM_021374 58175 Mm.103771 NM_021374 ENSMUSG00000002459 Rgs20 2900073E09Rik|Rgsz1 regulator of G-protein signaling 20 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-8 chr15 13245421 13245837 + 0.396392531282615 NA Intergenic Intergenic -71954 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-2 chr1 106401171 106401461 + 0.396392531282615 NA Intergenic Intergenic 145315 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615 chr1 59236738 59237185 + 0.396392531282615 NA 5' UTR (NM_001159948, exon 1 of 34) 5' UTR (NM_001159948, exon 1 of 34) 132 NM_001159948 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 alsin Rho guanine nucleotide exchange factor protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-11 chr9 54642936 54643289 + 0.396392531282615 NA intron (NM_053178, intron 1 of 13) intron (NM_053178, intron 1 of 13) 18773 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-2 chr13 23423389 23423822 + 0.396392531282615 NA exon (NM_013924, exon 1 of 3) exon (NM_013924, exon 1 of 3) 261 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-9 chr6 134699972 134700492 + 0.396392531282615 NA intron (NM_001170479, intron 3 of 3) intron (NM_001170479, intron 3 of 3) 59292 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-9 chr3 121643106 121643746 + 0.396392531282615 NA promoter-TSS (NR_036456) promoter-TSS (NR_036456) 59 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-10 chr3 145899103 145899906 + 0.396392531282615 NA Intergenic Intergenic -24758 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615-4 chr13 32939514 32939923 + 0.396392531282615 NA Intergenic Intergenic -25795 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-17 chr6 113481661 113482069 + 0.396392531282615 NA intron (NM_178942, intron 16 of 17) intron (NM_178942, intron 16 of 17) -1491 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-14 chr5 5380152 5380595 + 0.396392531282615 NA promoter-TSS (NM_011074) promoter-TSS (NM_011074) -122 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-7 chr14 25376927 25377499 + 0.396392531282615 NA Intergenic Intergenic -81972 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_36_26_0.176073238893974_4.84292412161046_0.396392531282615-10 chr3 146045356 146045779 + 0.396392531282615 NA intron (NM_172864, intron 20 of 22) intron (NM_172864, intron 20 of 22) 57697 NM_001166064 214804 Mm.268854 NM_001166064 ENSMUSG00000036863 Syde2 C430017H16Rik synapse defective 1, Rho GTPase, homolog 2 (C. elegans) protein-coding unique_peak2_36_26_0.176073238893974_4.84292412161046_0.396392531282615 chr10 96623920 96624547 + 0.396392531282615 NA Intergenic Intergenic 7232 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_37_26_0.214275952381679_4.86202547835431_0.396392531282615 chr8 68739775 68740250 + 0.396392531282615 NA Intergenic Intergenic -4866 NM_172753 234356 Mm.334569 NM_172753 ENSMUSG00000036356 Csgalnact1 4732435N03Rik|CSGalNAcT-1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding common_peak1_37_26_0.214275952381679_4.86202547835431_0.396392531282615-15 chr5 36293822 36294252 + 0.396392531282615 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) -7533 NR_106162 102465792 NR_106162 ENSMUSG00000098884 Mir7689 Gm27434|mmu-mir-7689 microRNA 7689 ncRNA common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-6 chr14 33247132 33247928 + 0.396392531282608 NA intron (NM_153800, intron 2 of 10) intron (NM_153800, intron 2 of 10) 30707 NM_153800 239027 Mm.318350 NM_153800 ENSMUSG00000063506 Arhgap22 B230341L19Rik|RHOGAP2|p68RacGAP Rho GTPase activating protein 22 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-14 chr6 59208841 59209313 + 0.396392531282608 NA 5' UTR (NM_001081145, exon 1 of 2) 5' UTR (NM_001081145, exon 1 of 2) 207 NM_001081145 68140 Mm.25843 NM_001081145 ENSMUSG00000049232 Tigd2 3632410O17Rik tigger transposable element derived 2 protein-coding unique_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608 chr1 36546786 36547170 + 0.396392531282608 NA non-coding (NR_132321, exon 1 of 4) non-coding (NR_132321, exon 1 of 4) 274 NM_001310533 109346 Mm.247537 NM_026241 ENSMUSG00000079610 Ankrd39 9130416N05Rik|C030004B10Rik ankyrin repeat domain 39 protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-2 chr11 119776625 119777217 + 0.396392531282608 NA intron (NM_028898, intron 6 of 33) intron (NM_028898, intron 6 of 33) 57444 NR_045313 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-6 chr5 115569174 115569900 + 0.396392531282608 NA intron (NM_172719, intron 1 of 57) intron (NM_172719, intron 1 of 57) 4274 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-7 chr18 67983939 67984340 + 0.396392531282608 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 50966 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-9 chr5 96800416 96801001 + 0.396392531282608 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 7323 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-12 chr4 149737341 149738051 + 0.396392531282608 NA promoter-TSS (NM_001284273) promoter-TSS (NM_001284273) 74 NM_001284273 230917 Mm.266704 NM_177672 ENSMUSG00000044700 Tmem201 AV028368|D4Ertd429e|Net5|Samp1 transmembrane protein 201 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608 chr1 64600596 64601136 + 0.396392531282608 NA 3' UTR (NM_009952, exon 9 of 9) 3' UTR (NM_009952, exon 9 of 9) 16302 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding unique_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-4 chr13 116950467 116951128 + 0.396392531282608 NA intron (NM_001081009, intron 3 of 26) intron (NM_001081009, intron 3 of 26) 74719 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-4 chr15 27321867 27322286 + 0.396392531282608 NA Intergenic Intergenic -144601 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-17 chr9 123924933 123925424 + 0.396392531282608 NA Intergenic CpG 43514 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-5 chr15 56721903 56722253 + 0.396392531282608 NA Intergenic Intergenic -27532 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608 chr3 121637811 121638385 + 0.396392531282608 NA intron (NR_036458, intron 2 of 2) intron (NR_036458, intron 2 of 2) 5387 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-8 chr19 10115732 10116251 + 0.396392531282608 NA Intergenic Intergenic -14488 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-16 chr7 75796247 75796602 + 0.396392531282608 NA Intergenic Intergenic -51914 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-2 chr1 86434078 86434412 + 0.396392531282608 NA Intergenic Intergenic 7916 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-11 chr8 122174395 122174647 + 0.396392531282608 NA Intergenic Intergenic -107620 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-15 chr7 16043133 16043841 + 0.396392531282608 NA Intergenic Intergenic -28358 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608 chr10 99172366 99172826 + 0.396392531282608 NA intron (NR_153333, intron 11 of 12) intron (NR_153333, intron 11 of 12) 64461 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 polypeptide N-acetylgalactosaminyltransferase 4 protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-8 chr7 45434948 45435309 + 0.396392531282608 NA promoter-TSS (NM_011304) promoter-TSS (NM_011304) 289 NM_030678 14936 Mm.275654 NM_030678 ENSMUSG00000003865 Gys1 Gys3|MGS glycogen synthase 1, muscle protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-7 chr17 14960727 14961133 + 0.396392531282608 NA intron (NM_024250, intron 1 of 11) CpG 330 NM_001360983 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-13 chr9 65435781 65436245 + 0.396392531282608 NA intron (NM_027134, intron 1 of 8) CpG 231 NM_027134 69606 Mm.287956 NM_027134 ENSMUSG00000059183 Mtfmt 2310020P08Rik mitochondrial methionyl-tRNA formyltransferase protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-9 chr7 110237699 110238204 + 0.396392531282608 NA intron (NM_009302, intron 1 of 11) intron (NM_009302, intron 1 of 11) 16248 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding unique_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-2 chr1 87792718 87793451 + 0.396392531282608 NA TTS (NM_001205391) TTS (NM_001205391) 8513 NR_028519 100217415 Mm.453537 NR_028519 ENSMUSG00000089281 Scarna6 MBI-46 small Cajal body-specific RNA 6 ncRNA common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-7 chr6 31147467 31147782 + 0.396392531282608 NA intron (NR_110471, intron 2 of 3) intron (NR_110471, intron 2 of 3) 70850 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA unique_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-2 chr6 34718502 34718899 + 0.396392531282608 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 9256 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-3 chr13 113794556 113794935 + 0.396392531282608 NA intron (NM_172595, intron 1 of 4) CpG 237 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-9 chr19 46041789 46042220 + 0.396392531282608 NA intron (NM_001113408, intron 1 of 10) intron (NM_001113408, intron 1 of 10) -2383 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-8 chr2 173257206 173257460 + 0.396392531282608 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 19200 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-14 chr9 78615652 78616154 + 0.396392531282608 NA exon (NM_153098, exon 1 of 33) exon (NM_153098, exon 1 of 33) 357 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-2 chr11 16810435 16810829 + 0.396392531282608 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 58429 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-3 chr1 162207579 162208038 + 0.396392531282608 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -9815 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608 chr1 9545440 9545730 + 0.396392531282608 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 177 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-8 chr8 126944238 126944616 + 0.396392531282608 NA intron (NM_024214, intron 1 of 4) intron (NM_024214, intron 1 of 4) 1494 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-6 chr5 23787705 23788197 + 0.396392531282608 NA intron (NM_001310467, intron 1 of 13) CpG 240 NM_001310467 72772 Mm.133300 NM_177323 ENSMUSG00000028999 Rint1 1500019C06Rik|2810450M21Rik|Rint-1 RAD50 interactor 1 protein-coding common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-9 chr9 64960946 64961228 + 0.396392531282608 NA 5' UTR (NM_175153, exon 1 of 13) 5' UTR (NM_175153, exon 1 of 13) 157 NM_175153 69882 Mm.272616 NM_175153 ENSMUSG00000034263 Ints14 2010321M09Rik|Vwa9 integrator complex subunit 14 protein-coding common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-2 chr10 16961920 16962468 + 0.396392531282608 NA intron (NR_038020, intron 5 of 8) intron (NR_038020, intron 5 of 8) 133588 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-13 chr5 149321872 149322259 + 0.396392531282608 NA Intergenic Intergenic 57061 NM_009663 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding unique_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-3 chr10 70098030 70098554 + 0.396392531282608 NA intron (NM_001111121, intron 1 of 8) intron (NM_001111121, intron 1 of 8) 1171 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-10 chr2 85098565 85099013 + 0.396392531282608 NA Intergenic Intergenic -12328 NR_040504 74687 Mm.66996 NR_040504 ENSMUSG00000086969 4930443O20Rik - RIKEN cDNA 4930443O20 gene ncRNA common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-3 chr11 82012070 82012583 + 0.396392531282608 NA Intergenic Intergenic -23251 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-3 chr17 22739232 22739745 + 0.396392531282608 NA Intergenic Intergenic 65090 NM_001362121 100534296 Mm.390939 NM_001362121 Gm9805 - predicted gene 9805 protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-7 chr5 113628002 113628597 + 0.396392531282608 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 15304 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-15 chr9 107702326 107703022 + 0.396392531282608 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 2917 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-11 chr4 107523202 107523697 + 0.396392531282608 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 88730 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-4 chr14 6108072 6108694 + 0.396392531282608 NA Intergenic CpG 178867 NM_001270812 100861615 Mm.488431 NM_001270812 ENSMUSG00000079396 LOC100861615 - alpha takusan-like protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-10 chr7 28597340 28597952 + 0.396392531282608 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 538 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-4 chr15 53675678 53676235 + 0.396392531282608 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -61677 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-4 chr17 72969938 72970603 + 0.396392531282608 NA Intergenic L1MC2|LINE|L1 51965 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-5 chr14 8214234 8214707 + 0.396392531282608 NA promoter-TSS (NM_001305936) promoter-TSS (NM_001305936) -32 NM_001305936 71393 Mm.292712 NM_027782 ENSMUSG00000021752 Kctd6 5430433B02Rik|AU044285 potassium channel tetramerisation domain containing 6 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-6 chr15 76196718 76197158 + 0.396392531282608 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) -1228 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608 chr11 87577573 87577941 + 0.396392531282608 NA promoter-TSS (NM_001361936) promoter-TSS (NM_001361936) -632 NM_001361936 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|Pnutl2 septin 4 protein-coding common_peak1_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-5 chr2 90679465 90679875 + 0.396392531282608 NA intron (NM_021512, intron 2 of 36) intron (NM_021512, intron 2 of 36) 2455 NM_021512 59015 Mm.24532 NM_021512 ENSMUSG00000051329 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197 nucleoporin 160 protein-coding common_peak2_31_31_-0.277014935355449_4.86149253232228_0.396392531282608-12 chr8 126830012 126830400 + 0.396392531282608 NA Intergenic Intergenic -18814 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_30_31_-0.322495480873974_4.83875225956301_0.396392531282608-5 chr4 136146306 136146902 + 0.396392531282608 NA Intergenic Intergenic 2782 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_133_119_-0.132392557541375_6.84069431683783_0.396300572187295 chr2 144009549 144011184 + 0.396300572187295 NA intron (NM_133626, intron 1 of 2) CpG 897 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding common_peak1_132_119_-0.143123071062486_6.83532906007728_0.396300572187295 chr11 21238301 21239672 + 0.396300572187295 NA promoter-TSS (NM_139061) promoter-TSS (NM_139061) -46 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_132_119_-0.143123071062486_6.83532906007728_0.396300572187295 chr13 110966468 110967814 + 0.396300572187295 NA Intergenic Intergenic -63295 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_132_119_-0.143123071062486_6.83532906007728_0.396300572187295-2 chr3 37906070 37907345 + 0.396300572187295 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 7894 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_93_69_0.137323306783844_6.19794467033689_0.396265517229168 chr10 7024764 7026075 + 0.396265517229168 NA intron (NM_001039652, intron 5 of 5) intron (NM_001039652, intron 5 of 5) -2234 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_93_69_0.137323306783844_6.19794467033689_0.396265517229168-2 chr17 56613363 56614321 + 0.396265517229168 NA TTS (NM_028782) TTS (NM_028782) 447 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding common_peak2_83_77_-0.179922502416113_6.19544096765419_0.396265517229168-2 chr19 59457771 59458723 + 0.396265517229168 NA promoter-TSS (NM_010132) promoter-TSS (NM_010132) 388 NR_002863 329078 Mm.80382 NR_002863 ENSMUSG00000087095 Emx2os - Emx2 opposite strand/antisense transcript (non-protein coding) ncRNA common_peak2_83_77_-0.179922502416113_6.19544096765419_0.396265517229168-4 chr5 139791573 139792165 + 0.396265517229168 NA intron (NM_010757, intron 1 of 2) CpG 333 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_93_69_0.137323306783844_6.19794467033689_0.396265517229168 chr11 98943106 98944241 + 0.396265517229168 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 3962 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_83_77_-0.179922502416113_6.19544096765419_0.396265517229168 chr17 87851973 87852748 + 0.396265517229168 NA Intergenic Intergenic -54366 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_83_77_-0.179922502416113_6.19544096765419_0.396265517229168-3 chr5 90222833 90223893 + 0.396265517229168 NA intron (NR_028088, intron 1 of 5) intron (NR_028088, intron 1 of 5) 633 NR_028088 231430 Mm.319697 NM_001033310 ENSMUSG00000035505 Cox18 BC038311 cytochrome c oxidase assembly protein 18 protein-coding common_peak1_118_88_0.12870149637094_6.54008417915187_0.396142811983599 chr8 3676529 3677138 + 0.396142811983599 NA intron (NM_025701, intron 1 of 1) intron (NM_025701, intron 1 of 1) 356 NM_025701 66682 Mm.29090 NM_025701 ENSMUSG00000040236 Trappc5 4021401A16Rik|TRS31 trafficking protein particle complex 5 protein-coding common_peak2_106_97_-0.16254380708605_6.53343794057218_0.396142811983599 chr9 123112503 123113684 + 0.396142811983599 NA promoter-TSS (NM_001081188) promoter-TSS (NM_001081188) 112 NM_026917 69035 Mm.28300 NM_026917 ENSMUSG00000025786 Zdhhc3 1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373 zinc finger, DHHC domain containing 3 protein-coding common_peak1_106_97_-0.16254380708605_6.53343794057218_0.396142811983599 chr10 75920908 75922187 + 0.396142811983599 NA promoter-TSS (NM_001161853) promoter-TSS (NM_001161853) 67 NM_011418 20587 Mm.279751 NM_011418 ENSMUSG00000000902 Smarcb1 AU020204|Baf47|Ini1|SNF5/INI1|Snf5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 protein-coding common_peak2_107_97_-0.149217972788294_6.54010085772106_0.396142811983599 chr19 4441394 4442733 + 0.396142811983599 NA intron (NR_045989, intron 1 of 4) intron (NR_045989, intron 1 of 4) 2504 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_266_231_-0.0958931460734318_7.81003442209086_0.39604738217528 chr5 36378758 36381465 + 0.39604738217528 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 18028 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_325_250_0.0765444562004074_8.00981578205097_0.395913567664275 chr4 86668180 86671309 + 0.395913567664275 NA intron (NM_007408, intron 1 of 7) intron (NM_007408, intron 1 of 7) 315 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_370_285_0.0734478089191128_8.19659524123795_0.395904744328154 chr17 35915611 35919011 + 0.395904744328154 NA promoter-TSS (NR_035445) promoter-TSS (NR_035445) 115 NM_001163818 52040 Mm.29385 NM_175934 ENSMUSG00000039220 Ppp1r10 2610025H06Rik|Cat53|D17Ertd808e|Fb19|Pnuts protein phosphatase 1, regulatory subunit 10 protein-coding common_peak1_194_171_-0.114344038412139_7.36909273549603_0.395806049085074 chr10 115314313 115316536 + 0.395806049085074 NA 5' UTR (NM_024454, exon 1 of 7) 5' UTR (NM_024454, exon 1 of 7) 167 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding common_peak1_209_159_0.0961535407394072_7.37000486525707_0.395806049085025 chr18 60747083 60749227 + 0.395806049085025 NA intron (NM_001348146, intron 1 of 6) GC_rich|Low_complexity|Low_complexity 265 NM_001348100 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_134_120_-0.1337144671938_6.85200600367769_0.395471607452959-2 chr5 43781438 43782577 + 0.395471607452959 NA exon (NM_001159963, exon 1 of 11) exon (NM_001159963, exon 1 of 11) 142 NM_001159963 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding common_peak2_134_120_-0.1337144671938_6.85200600367769_0.395471607452959 chr5 66616975 66618641 + 0.395471607452959 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 1009 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak1_134_120_-0.1337144671938_6.85200600367769_0.395471607452959 chr18 6240854 6242247 + 0.395471607452959 NA promoter-TSS (NM_008448) promoter-TSS (NM_008448) -26 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding common_peak2_64_60_-0.192597243927139_5.83443871559932_0.395251503927869 chr1 60180672 60181393 + 0.395251503927869 NA intron (NM_173444, intron 1 of 54) intron (NM_173444, intron 1 of 54) 433 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak1_64_60_-0.192597243927139_5.83443871559932_0.395251503927869 chr11 97807635 97808107 + 0.395251503927869 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 8306 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_63_60_-0.214807252491579_5.8233337113171_0.395251503927869-3 chr8 108764110 108764601 + 0.395251503927869 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 49711 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_64_60_-0.192597243927139_5.83443871559932_0.395251503927869-2 chr15 85655880 85656645 + 0.395251503927869 NA Intergenic Intergenic -47511 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_63_60_-0.214807252491579_5.8233337113171_0.395251503927869 chr10 76468518 76469373 + 0.395251503927869 NA promoter-TSS (NM_019434) promoter-TSS (NM_019434) -26 NM_019434 54387 Mm.30098 NM_019434 ENSMUSG00000001150 Mcm3ap GANP|mKIAA0572 minichromosome maintenance complex component 3 associated protein protein-coding common_peak1_63_60_-0.214807252491579_5.8233337113171_0.395251503927869-2 chr4 109656844 109657695 + 0.395251503927869 NA Intergenic CpG 8103 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_63_60_-0.214807252491579_5.8233337113171_0.395251503927869 chr13 52675651 52676686 + 0.395251503927869 NA Intergenic Intergenic 79286 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_64_60_-0.192597243927139_5.83443871559932_0.395251503927869-3 chr17 80885400 80886188 + 0.395251503927869 NA Intergenic Intergenic -10999 NR_131128 320784 Mm.474182 NR_131127 ENSMUSG00000112121 C230072F16Rik - RIKEN cDNA C230072F16 gene ncRNA common_peak2_63_60_-0.214807252491579_5.8233337113171_0.395251503927869-2 chr5 138441494 138442139 + 0.395251503927869 NA intron (NM_028130, intron 1 of 4) CpG 340 NM_028130 72154 Mm.20263 NM_028130 ENSMUSG00000036898 Zfp157 2610020C11Rik|A630094N24Rik|AI327407|Roma|mszf12|mszf23-1 zinc finger protein 157 protein-coding common_peak1_63_60_-0.214807252491579_5.8233337113171_0.395251503927869-3 chr8 12671569 12672174 + 0.395251503927869 NA intron (NM_198031, intron 1 of 21) CpG 229 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding common_peak2_72_53_0.149527933402458_5.8296514688647_0.395251503927856 chr11 112782275 112783029 + 0.395251503927856 NA exon (NM_011448, exon 1 of 3) exon (NM_011448, exon 1 of 3) 442 NM_011448 20682 Mm.286407 NM_011448 ENSMUSG00000000567 Sox9 2010306G03Rik|AV220920|mKIAA4243 SRY (sex determining region Y)-box 9 protein-coding common_peak2_72_53_0.149527933402458_5.8296514688647_0.395251503927856-3 chr15 38299361 38299906 + 0.395251503927856 NA intron (NM_013692, intron 1 of 3) CpG 267 NM_001357677 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak2_72_53_0.149527933402458_5.8296514688647_0.395251503927856-2 chr11 116021784 116023115 + 0.395251503927856 NA 3' UTR (NM_008211, exon 4 of 4) 3' UTR (NM_008211, exon 4 of 4) 2055 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak1_72_53_0.149527933402458_5.8296514688647_0.395251503927856 chr7 143599237 143599976 + 0.395251503927856 NA intron (NM_013742, intron 1 of 22) intron (NM_013742, intron 1 of 22) 484 NM_001252593 27267 Mm.125659 NM_013742 ENSMUSG00000010755 Cars CA3 cysteinyl-tRNA synthetase protein-coding common_peak2_72_53_0.149527933402458_5.8296514688647_0.395251503927856-4 chr2 154603270 154603695 + 0.395251503927856 NA intron (NM_021534, intron 1 of 3) intron (NM_021534, intron 1 of 3) 191 NM_021534 59038 Mm.24673 NM_021534 ENSMUSG00000000876 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 protein-coding common_peak2_309_267_-0.0900927112975989_8.02104283480897_0.395182083211505 chr1 155215252 155217817 + 0.395182083211505 NA Intergenic Intergenic 57831 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_119_89_0.124569489722966_6.55413784119116_0.395124771764859-2 chr9 102674085 102674956 + 0.395124771764859 NA Intergenic Intergenic -43284 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_119_89_0.124569489722966_6.55413784119116_0.395124771764859 chr3 86115024 86116672 + 0.395124771764859 NA intron (NM_001082414, intron 9 of 14) intron (NM_001082414, intron 9 of 14) 23010 NR_004417 19870 NR_004417 ENSMUSG00000064984 Snord73a Rnu73a|U73a small nucleolar RNA, C/D box U73A snoRNA common_peak2_108_98_-0.150661734951163_6.55402575260403_0.395124771764859 chr4 59548452 59549257 + 0.395124771764859 NA intron (NM_144904, intron 1 of 14) CpG 510 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_119_89_0.124569489722966_6.55413784119116_0.395124771764859 chr12 111537149 111537887 + 0.395124771764859 NA promoter-TSS (NM_173363) promoter-TSS (NM_173363) -583 NM_178041 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak2_108_98_-0.150661734951163_6.55402575260403_0.395124771764859-2 chr6 134920476 134921969 + 0.395124771764859 NA exon (NM_009875, exon 1 of 3) exon (NM_009875, exon 1 of 3) 821 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding common_peak2_119_89_0.124569489722966_6.55413784119116_0.395124771764859-2 chr8 124661956 124663333 + 0.395124771764859 NA intron (NM_175149, intron 1 of 3) intron (NM_175149, intron 1 of 3) 725 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak2_85_78_-0.164593197540914_6.22148414940665_0.394977286334986 chr10 11280865 11281940 + 0.394977286334986 NA promoter-TSS (NM_027968) promoter-TSS (NM_027968) 72 NM_027968 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding common_peak1_94_70_0.132018254221099_6.21575624661523_0.394977286334986 chr1 91823055 91824275 + 0.394977286334986 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 22204 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_94_70_0.132018254221099_6.21575624661523_0.394977286334986-2 chr13 49300973 49301999 + 0.394977286334986 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 7722 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_94_70_0.132018254221099_6.21575624661523_0.394977286334986 chr11 119603087 119603899 + 0.394977286334986 NA 5' UTR (NM_001306081, exon 1 of 33) 5' UTR (NM_001306081, exon 1 of 33) 588 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_94_70_0.132018254221099_6.21575624661523_0.394977286334986-2 chr1 167271017 167271931 + 0.394977286334986 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 13653 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak1_85_78_-0.164593197540914_6.22148414940665_0.394977286334986 chr8 125342450 125343220 + 0.394977286334986 NA Intergenic Intergenic 149998 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_94_70_0.132018254221099_6.21575624661523_0.394977286334986-4 chr6 6112244 6113202 + 0.394977286334986 NA intron (NM_015829, intron 9 of 17) intron (NM_015829, intron 9 of 17) 104450 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak2_84_78_-0.181347971660017_6.21310676234709_0.394977286334986 chr16 8637073 8638372 + 0.394977286334986 NA promoter-TSS (NM_016881) promoter-TSS (NM_016881) 15 NM_016881 54128 Mm.9699 NM_016881 ENSMUSG00000022711 Pmm2 AI585868|C86848 phosphomannomutase 2 protein-coding common_peak2_85_78_-0.164593197540914_6.22148414940665_0.394977286334986-2 chr12 85338789 85339367 + 0.394977286334986 NA exon (NM_145138, exon 1 of 22) exon (NM_145138, exon 1 of 22) 284 NM_145138 217718 Mm.29071 NM_145138 ENSMUSG00000034290 Nek9 C130021H08Rik NIMA (never in mitosis gene a)-related expressed kinase 9 protein-coding common_peak2_94_70_0.132018254221099_6.21575624661523_0.394977286334986-3 chr19 18759875 18760716 + 0.394977286334986 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 10312 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_84_78_-0.181347971660017_6.21310676234709_0.394977286334986-2 chr6 28423147 28424153 + 0.394977286334986 NA promoter-TSS (NM_007480) promoter-TSS (NM_007480) 46 NM_007480 11844 Mm.389075 NM_007480 ENSMUSG00000020440 Arf5 - ADP-ribosylation factor 5 protein-coding common_peak2_211_161_0.0918100932387471_7.385755049504_0.39467051478053 chr16 93912730 93914970 + 0.39467051478053 NA Intergenic Intergenic 15717 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding common_peak2_135_121_-0.135016439372923_6.86322911787643_0.394656948628384 chr4 123663899 123665574 + 0.394656948628384 NA intron (NM_001199137, intron 1 of 92) CpG -1145 NR_136925 102633214 Mm.399387 NR_136925 Gm12925 - predicted gene 12925 ncRNA common_peak1_355_305_-0.083190575439211_8.21579255497305_0.394626658651743 chr5 3340542 3345228 + 0.394626658651743 NA Intergenic CpG -1008 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_165_146_-0.11840370351869_7.14047049307702_0.394558575268888 chr15 25411685 25413101 + 0.394558575268888 NA intron (NM_027395, intron 1 of 1) CpG 1371 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_178_135_0.101814731086169_7.13837020679342_0.394558575268888 chr15 102981396 102982856 + 0.394558575268888 NA exon (NM_008272, exon 2 of 3) exon (NM_008272, exon 2 of 3) -1063 NR_155438 102640931 Mm.385821 NR_155438 Gm36878 - predicted gene, 36878 ncRNA common_peak1_248_190_0.0846754155093796_7.61976653579044_0.394425871485613 chr7 90130257 90132278 + 0.394425871485613 NA intron (NM_001360867, intron 1 of 19) intron (NM_001360867, intron 1 of 19) 1054 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak2_232_203_-0.105460907417168_7.61969488826291_0.394425871485564 chr9 45953934 45955977 + 0.394425871485564 NA non-coding (NR_152206, exon 1 of 1) non-coding (NR_152206, exon 1 of 1) 294 NM_001289668 214597 Mm.379345 NM_172257 ENSMUSG00000034908 Sidt2 B930096O19|BC023957|CGI-40 SID1 transmembrane family, member 2 protein-coding unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-3 chr12 80032830 80033030 + 0.394412252720706 NA Intergenic Intergenic 80083 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-39 chr7 56019702 56019942 + 0.394412252720706 NA promoter-TSS (NM_153578) promoter-TSS (NM_153578) -249 NM_153578 233280 Mm.389901 NM_153578 ENSMUSG00000047037 Nipa1 1110027G09Rik|A830014A18Rik|FSP3|Spg6 non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human) protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-3 chr15 71862733 71862958 + 0.394412252720706 NA intron (NM_027174, intron 44 of 63) intron (NM_027174, intron 44 of 63) -135007 NM_177819 70363 Mm.126450 NM_177819 ENSMUSG00000036800 Fam135b 1700010C24Rik|A830008O07Rik family with sequence similarity 135, member B protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706 chr1 30877701 30878011 + 0.394412252720706 NA Intergenic Intergenic -14600 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-34 chr7 97331716 97331992 + 0.394412252720706 NA promoter-TSS (NM_001039039) promoter-TSS (NM_001039039) -469 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-12 chr16 23446148 23446456 + 0.394412252720706 NA Intergenic Intergenic 17169 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-3 chr10 34531584 34531825 + 0.394412252720706 NA intron (NM_001358769, intron 2 of 8) intron (NM_001358769, intron 2 of 8) 48304 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-5 chr2 32587239 32587430 + 0.394412252720706 NA 5' UTR (NM_011373, exon 1 of 5) 5' UTR (NM_011373, exon 1 of 5) 256 NM_011373 20448 Mm.27446 NM_011373 ENSMUSG00000079442 St6galnac4 SIAT7-D|ST6GalNAcIV|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-19 chr19 46407081 46407287 + 0.394412252720706 NA intron (NM_001025391, intron 2 of 11) intron (NM_001025391, intron 2 of 11) 10288 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) SUFU negative regulator of hedgehog signaling protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-25 chr4 127348207 127348439 + 0.394412252720706 NA Intergenic Intergenic 5758 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-8 chr4 111719394 111719699 + 0.394412252720706 NA promoter-TSS (NM_026470) promoter-TSS (NM_026470) -464 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-27 chr7 144634513 144634817 + 0.394412252720706 NA intron (NM_001242349, intron 11 of 24) intron (NM_001242349, intron 11 of 24) -52229 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-6 chr11 77162112 77162302 + 0.394412252720706 NA intron (NM_176965, intron 2 of 17) intron (NM_176965, intron 2 of 17) 26761 NM_176965 319634 Mm.108786 NM_176965 ENSMUSG00000050944 Efcab5 4930563A03Rik EF-hand calcium binding domain 5 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-26 chr2 145792003 145792273 + 0.394412252720706 NA intron (NM_028724, intron 2 of 12) intron (NM_028724, intron 2 of 12) 6022 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706 chr1 191216783 191216989 + 0.394412252720706 NA Intergenic Intergenic -7568 NR_151547 100504360 Mm.16927 NM_001033188 D730003I15Rik AU020850 RIKEN cDNA D730003I15 gene ncRNA unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-29 chr5 74159486 74159694 + 0.394412252720706 NA Intergenic Intergenic -35736 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-10 chr7 79147183 79147417 + 0.394412252720706 NA intron (NM_001045489, intron 1 of 8) intron (NM_001045489, intron 1 of 8) 1760 NM_001045489 17304 Mm.1451 NM_008594 ENSMUSG00000030605 Mfge8 AA408458|AI325141|MFG-E8|MP47|Mfgm|P47|SED1|lactadherin milk fat globule-EGF factor 8 protein protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-23 chr18 80532228 80532428 + 0.394412252720706 NA Intergenic Intergenic 12218 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-9 chr4 120924505 120924737 + 0.394412252720706 NA 5' UTR (NM_001160043, exon 1 of 2) 5' UTR (NM_001160043, exon 1 of 2) 384 NM_028457 73172 Mm.151436 NM_028457 ENSMUSG00000028629 Exo5 3110037I16Rik|AV297100|Dem1|Exo V|mExo5 exonuclease 5 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-20 chr2 13384941 13385172 + 0.394412252720706 NA intron (NM_001081084, intron 29 of 66) intron (NM_001081084, intron 29 of 66) 106820 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-11 chr13 43018391 43018664 + 0.394412252720706 NA intron (NM_001005740, intron 2 of 12) intron (NM_001005740, intron 2 of 12) -104312 NM_001005748 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-30 chr3 102189295 102189557 + 0.394412252720706 NA exon (NM_177545, exon 3 of 8) exon (NM_177545, exon 3 of 8) 15267 NM_177545 229658 Mm.118004 NM_177545 ENSMUSG00000027860 Vangl1 Kitenin|Lpp2|Stb2|Stbm VANGL planar cell polarity 1 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-22 chr4 11735537 11735789 + 0.394412252720706 NA Intergenic Intergenic -22494 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-8 chr8 121573056 121573313 + 0.394412252720706 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 5622 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-13 chr14 7853619 7853808 + 0.394412252720706 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 35756 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-6 chr17 43130656 43130868 + 0.394412252720706 NA Intergenic Intergenic 27529 NR_045155 545207 Mm.329050 NR_045153 E130008D07Rik - RIKEN cDNA E130008D07 gene ncRNA common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706 chr1 91025127 91025355 + 0.394412252720706 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 26514 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706 chr1 72598892 72599209 + 0.394412252720706 NA intron (NM_018817, intron 8 of 16) intron (NM_018817, intron 8 of 16) 15799 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-6 chr12 85570039 85570294 + 0.394412252720706 NA Intergenic Intergenic -28939 NM_001205052 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-35 chr7 143799623 143799978 + 0.394412252720706 NA exon (NM_030221, exon 17 of 21) exon (NM_030221, exon 17 of 21) -15300 NM_175534 244238 Mm.183561 NM_175534 ENSMUSG00000048965 Mrgpre C130069N09Rik|Ebrt3|Mgrf|MrgE MAS-related GPR, member E protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-2 chr10 4431252 4431515 + 0.394412252720706 NA intron (NM_001358796, intron 1 of 13) intron (NM_001358796, intron 1 of 13) 1005 NM_025343 66084 Mm.153111 NM_025343 ENSMUSG00000019763 Rmnd1 0610042C05Rik|AA408137|AI462664|AW536662 required for meiotic nuclear division 1 homolog protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-14 chr14 65883951 65884195 + 0.394412252720706 NA Intergenic ID4_|SINE|ID 46771 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-15 chr19 36236350 36236647 + 0.394412252720706 NA Intergenic Intergenic -116654 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding unique_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706 chr10 111673187 111673382 + 0.394412252720706 NA Intergenic Intergenic -79011 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-10 chr7 80260763 80260998 + 0.394412252720706 NA promoter-TSS (NR_028053) promoter-TSS (NR_028053) -335 NR_028053 83485 Mm.21175 NM_031375 ENSMUSG00000047084 Ngrn AW552001 neugrin, neurite outgrowth associated protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-20 chr4 134628711 134628948 + 0.394412252720706 NA intron (NM_207237, intron 2 of 11) intron (NM_207237, intron 2 of 11) -60978 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-13 chr13 52080213 52080445 + 0.394412252720706 NA Intergenic Intergenic -16412 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-4 chr14 25471738 25471946 + 0.394412252720706 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 12657 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-38 chr9 14520457 14520754 + 0.394412252720706 NA Intergenic Intergenic 19986 NM_023153 66070 Mm.245938 NM_023153 ENSMUSG00000004096 Cwc15 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1 CWC15 spliceosome-associated protein protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-4 chr2 51985938 51986170 + 0.394412252720706 NA Intergenic Intergenic -12846 NM_001141948 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-34 chr6 143099622 143099911 + 0.394412252720706 NA exon (NM_029897, exon 2 of 25) exon (NM_029897, exon 2 of 25) 386 NM_001362118 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-21 chr2 69789145 69789351 + 0.394412252720706 NA promoter-TSS (NM_028521) promoter-TSS (NM_028521) 238 NM_001077684 75051 Mm.195726 NM_001077684 ENSMUSG00000070883 Ccdc173 4930525K21Rik|4930578N16Rik coiled-coil domain containing 173 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-43 chrX 16618744 16619067 + 0.394412252720706 NA promoter-TSS (NM_173740) promoter-TSS (NM_173740) -793 NM_173740 17161 Mm.21108 NM_173740 ENSMUSG00000025037 Maoa 1110061B18Rik|AA407771 monoamine oxidase A protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-3 chr14 25694462 25694659 + 0.394412252720706 NA intron (NM_134084, intron 1 of 5) intron (NM_134084, intron 1 of 5) 390 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-13 chr9 106684614 106684835 + 0.394412252720706 NA intron (NM_001081654, intron 2 of 5) intron (NM_001081654, intron 2 of 5) 1092 NM_011573 21767 Mm.22266 NM_011573 ENSMUSG00000040813 Tex264 TEG-264 testis expressed gene 264 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-29 chr3 102112215 102112546 + 0.394412252720706 NA intron (NM_001355663, intron 2 of 11) intron (NM_001355663, intron 2 of 11) 25965 NM_009814 12373 Mm.15343 NM_009814 ENSMUSG00000027861 Casq2 AA033488|AW146219|Csq2|ESTM52|cCSQ calsequestrin 2 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-10 chr15 7012571 7012781 + 0.394412252720706 NA Intergenic Intergenic -116896 NM_001113386 16880 Mm.149720 NM_013584 ENSMUSG00000054263 Lifr A230075M04Rik|AW061234|LIF leukemia inhibitory factor receptor protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-8 chr4 148087749 148087981 + 0.394412252720706 NA intron (NM_001301281, intron 1 of 4) CpG 199 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-18 chr16 62873394 62873586 + 0.394412252720706 NA intron (NM_011173, intron 1 of 14) intron (NM_011173, intron 1 of 14) 19183 NM_011173 19128 Mm.127156 NM_011173 ENSMUSG00000022912 Pros1 AW214361 protein S (alpha) protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-6 chr19 38395973 38396184 + 0.394412252720706 NA promoter-TSS (NM_175507) promoter-TSS (NM_175507) 98 NM_175507 240660 Mm.262085 NM_175507 ENSMUSG00000044026 Slc35g1 AA590464|D330039I19Rik|Tmem20 solute carrier family 35, member G1 protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-12 chr9 21411830 21412048 + 0.394412252720706 NA promoter-TSS (NR_045742) promoter-TSS (NR_045742) 102 NM_021888 60507 Mm.436579 NM_021888 ENSMUSG00000002825 Qtrt1 2610028E17Rik|Tgt queuine tRNA-ribosyltransferase catalytic subunit 1 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-32 chr5 148342926 148343120 + 0.394412252720706 NA intron (NM_007513, intron 5 of 12) intron (NM_007513, intron 5 of 12) 49792 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-6 chr11 61914980 61915244 + 0.394412252720706 NA exon (NM_019921, exon 4 of 15) exon (NM_019921, exon 4 of 15) 15145 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-37 chr7 25778326 25778671 + 0.394412252720706 NA intron (NM_009465, intron 5 of 19) intron (NM_009465, intron 5 of 19) 10235 NM_001190974 26362 Mm.4128 NM_009465 ENSMUSG00000002602 Axl AI323647|Ark|Tyro7|Ufo AXL receptor tyrosine kinase protein-coding unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-7 chr7 144669304 144669505 + 0.394412252720706 NA exon (NM_178642, exon 3 of 26) exon (NM_178642, exon 3 of 26) 69188 NM_178642 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-14 chr19 17024625 17024838 + 0.394412252720706 NA intron (NM_181348, intron 6 of 19) intron (NM_181348, intron 6 of 19) 68613 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-2 chr11 67532283 67532537 + 0.394412252720706 NA promoter-TSS (NM_008088) promoter-TSS (NM_008088) -588 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-12 chr6 17494355 17494605 + 0.394412252720706 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 30523 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-10 chr12 73377324 73377537 + 0.394412252720706 NA intron (NR_046013, intron 2 of 3) intron (NR_046013, intron 2 of 3) 32133 NR_046013 380765 Mm.490476 NR_046013 ENSMUSG00000056359 D830013O20Rik Gm891 RIKEN cDNA D830013O20 gene ncRNA unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-12 chr13 102573123 102573326 + 0.394412252720706 NA Intergenic Intergenic -120323 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-5 chr11 50275245 50275473 + 0.394412252720706 NA intron (NM_175334, intron 1 of 4) intron (NM_175334, intron 1 of 4) 16977 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706 chr1 134096687 134096909 + 0.394412252720706 NA Intergenic Intergenic -14444 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-7 chr3 121374931 121375163 + 0.394412252720706 NA Intergenic Intergenic -51494 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-24 chr19 60947203 60947433 + 0.394412252720706 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 57569 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-27 chr4 140700558 140700759 + 0.394412252720706 NA promoter-TSS (NM_173867) promoter-TSS (NM_173867) -815 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-3 chr10 19170246 19170471 + 0.394412252720706 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 3120 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-4 chr16 97075129 97075382 + 0.394412252720706 NA intron (NM_031174, intron 1 of 32) intron (NM_031174, intron 1 of 32) 95480 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-21 chr5 124908617 124908837 + 0.394412252720706 NA Intergenic Intergenic 46022 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-4 chr10 111527914 111528114 + 0.394412252720706 NA Intergenic Intergenic 21728 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-40 chr7 90388550 90388793 + 0.394412252720706 NA intron (NM_001040087, intron 1 of 9) intron (NM_001040087, intron 1 of 9) 1690 NM_001040088 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-7 chr7 78924951 78925181 + 0.394412252720706 NA Intergenic Intergenic 10831 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-8 chr11 88715968 88716216 + 0.394412252720706 NA intron (NM_054043, intron 4 of 13) intron (NM_054043, intron 4 of 13) 2137 NM_054043 76626 Mm.400451 NM_054043 ENSMUSG00000069769 Msi2 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h musashi RNA-binding protein 2 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-17 chr17 47595755 47596039 + 0.394412252720706 NA intron (NM_001081635, intron 4 of 6) intron (NM_001081635, intron 4 of 6) 2430 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-5 chr9 107619397 107619658 + 0.394412252720706 NA intron (NM_008138, intron 4 of 8) intron (NM_008138, intron 4 of 8) -10286 NM_001291539 20347 Mm.4083 NM_009153 ENSMUSG00000057969 Sema3b SemA|Semaa|sema5|semaV sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B protein-coding common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-7 chrX 9662241 9662490 + 0.394412252720706 NA intron (NM_025975, intron 1 of 4) intron (NM_025975, intron 1 of 4) 618 NM_025975 67117 Mm.29150 NM_025975 ENSMUSG00000031176 Dynlt3 2310075M16Rik|AU042796|Tcte1l dynein light chain Tctex-type 3 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-21 chr18 11840058 11840301 + 0.394412252720706 NA promoter-TSS (NR_045421) promoter-TSS (NR_045421) 259 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-5 chr10 127605028 127605226 + 0.394412252720706 NA intron (NM_008512, intron 6 of 88) intron (NM_008512, intron 6 of 88) 16021 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-7 chr11 88526632 88526822 + 0.394412252720706 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -92524 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-35 chr7 16230236 16230425 + 0.394412252720706 NA Intergenic Intergenic -8298 NM_027883 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-24 chr4 126125169 126125433 + 0.394412252720706 NA intron (NM_028800, intron 3 of 10) intron (NM_028800, intron 3 of 10) 21344 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-19 chr17 47039130 47039347 + 0.394412252720706 NA Intergenic Intergenic -28706 NM_001177374 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-4 chr13 23573846 23574052 + 0.394412252720706 NA promoter-TSS (NM_178188) promoter-TSS (NM_178188) 241 NM_178195 319180 NM_178195 ENSMUSG00000069268 Hist1h2bf - histone cluster 1, H2bf protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-2 chr1 170187660 170187940 + 0.394412252720706 NA Intergenic Intergenic -12836 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-8 chr13 63658881 63659185 + 0.394412252720706 NA Intergenic Intergenic 75265 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-9 chr12 30003470 30003704 + 0.394412252720706 NA intron (NM_181395, intron 17 of 22) intron (NM_181395, intron 17 of 22) 65551 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-11 chr7 109560642 109560936 + 0.394412252720706 NA intron (NM_001001326, intron 2 of 19) intron (NM_001001326, intron 2 of 19) 40657 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-4 chr19 18712471 18712751 + 0.394412252720706 NA promoter-TSS (NM_177640) promoter-TSS (NM_177640) -625 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-15 chr13 104024233 104024532 + 0.394412252720706 NA 3' UTR (NM_029447, exon 13 of 13) 3' UTR (NM_029447, exon 13 of 13) 85232 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-37 chr8 69849379 69849649 + 0.394412252720706 NA intron (NR_151670, intron 1 of 3) B3|SINE|B2 16890 NR_151669 80720 Mm.210823 NM_001024954 ENSMUSG00000031860 Pbx4 2410015M21Rik|AI429113|AW045266 pre B cell leukemia homeobox 4 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-28 chr4 155697626 155697988 + 0.394412252720706 NA Intergenic Intergenic 3465 NM_178699 230991 Mm.29083 NM_178699 ENSMUSG00000074738 Fndc10 B930041F14Rik|MNCb-3966 fibronectin type III domain containing 10 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-17 chr2 69376517 69376729 + 0.394412252720706 NA Intergenic Intergenic -3839 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-2 chr10 111937688 111937922 + 0.394412252720706 NA Intergenic Intergenic -34890 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-22 chr6 18849347 18849636 + 0.394412252720706 NA intron (NM_133939, intron 1 of 3) intron (NM_133939, intron 1 of 3) 856 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-11 chr13 41805263 41805477 + 0.394412252720706 NA intron (NM_001145875, intron 4 of 6) intron (NM_001145875, intron 4 of 6) 42118 NM_175417 109254 Mm.25195 NM_175417 ENSMUSG00000058022 Adtrp 9530008L14Rik androgen dependent TFPI regulating protein protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-30 chr5 100602088 100602303 + 0.394412252720706 NA Intergenic Intergenic -29990 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-4 chr10 117033729 117033918 + 0.394412252720706 NA Intergenic Intergenic -11518 NM_146242 237560 Mm.37320 NM_146242 ENSMUSG00000060187 Lrrc10 D330003I11Rik|Hrlrrp|Serdin1 leucine rich repeat containing 10 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-32 chr4 109664987 109665177 + 0.394412252720706 NA exon (NM_001301368, exon 2 of 3) exon (NM_001301368, exon 2 of 3) 290 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-6 chr5 137785081 137785326 + 0.394412252720706 NA exon (NM_144913, exon 1 of 4) exon (NM_144913, exon 1 of 4) 1498 NM_144913 231803 Mm.61193 NM_144913 ENSMUSG00000029726 Mepce Bcdin3|D5Wsu46e methylphosphate capping enzyme protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-19 chr3 21949078 21949396 + 0.394412252720706 NA Intergenic Intergenic -127415 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-9 chr7 38271954 38272182 + 0.394412252720706 NA promoter-TSS (NM_025390) promoter-TSS (NM_025390) -720 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-7 chr3 21569571 21569782 + 0.394412252720706 NA Intergenic Intergenic -506976 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-31 chr4 47199490 47199876 + 0.394412252720706 NA Intergenic Intergenic -8329 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-10 chr13 34709860 34710144 + 0.394412252720706 NA Intergenic Intergenic -29640 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-20 chr17 72926103 72926341 + 0.394412252720706 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 7917 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-3 chr12 80434501 80434749 + 0.394412252720706 NA intron (NM_177267, intron 1 of 8) intron (NM_177267, intron 1 of 8) 1976 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-8 chr12 21426973 21427170 + 0.394412252720706 NA Intergenic Intergenic -9635 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706 chr10 43695781 43696055 + 0.394412252720706 NA Intergenic Intergenic -50240 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-5 chr16 24205973 24206225 + 0.394412252720706 NA Intergenic Intergenic -123409 NR_155457 108168278 Mm.417246 NR_155457 Gm46545 - predicted gene, 46545 ncRNA common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-11 chr7 127573978 127574246 + 0.394412252720706 NA intron (NM_001360741, intron 2 of 8) intron (NM_001360741, intron 2 of 8) 764 NM_026888 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-7 chr3 39059613 39059842 + 0.394412252720706 NA Intergenic Intergenic 172787 NM_183221 329628 Mm.316210 NM_183221 ENSMUSG00000046743 Fat4 6030410K14Rik|9430004M15 FAT atypical cadherin 4 protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-4 chr11 96350063 96350324 + 0.394412252720706 NA intron (NR_155303, intron 1 of 3) intron (NR_155303, intron 1 of 3) -1439 NM_134032 103889 Mm.281153 NM_134032 ENSMUSG00000075588 Hoxb2 AI894218|Hox-2.8|Hoxbes2 homeobox B2 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-15 chr15 55122646 55122880 + 0.394412252720706 NA intron (NM_145470, intron 1 of 8) intron (NM_145470, intron 1 of 8) -9181 NR_045093 100503794 Mm.360519 NR_045093 ENSMUSG00000053749 Gm9920 - predicted gene 9920 ncRNA unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-7 chr12 99339355 99339602 + 0.394412252720706 NA intron (NM_183186, intron 3 of 5) intron (NM_183186, intron 3 of 5) 110596 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-3 chr11 86347613 86347842 + 0.394412252720706 NA intron (NM_001080931, intron 2 of 29) intron (NM_001080931, intron 2 of 29) 9798 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-16 chr19 43550760 43551020 + 0.394412252720706 NA Intergenic Intergenic -26285 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-10 chr5 43788312 43788521 + 0.394412252720706 NA Intergenic Intergenic -6267 NM_178729 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-4 chr17 72956714 72957001 + 0.394412252720706 NA Intergenic Intergenic 38552 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-31 chr5 101121033 101121256 + 0.394412252720706 NA Intergenic Intergenic 274915 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-16 chr16 16213471 16213703 + 0.394412252720706 NA exon (NM_026163, exon 1 of 13) exon (NM_026163, exon 1 of 13) 242 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706 chr10 19163123 19163358 + 0.394412252720706 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) -3998 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-23 chr7 19084702 19084960 + 0.394412252720706 NA intron (NM_032418, intron 1 of 14) intron (NM_032418, intron 1 of 14) 982 NM_001190491 13400 Mm.6529 NM_032418 ENSMUSG00000030409 Dmpk DM|DMK|Dm15|MDPK|MT-PK dystrophia myotonica-protein kinase protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-5 chr10 125969705 125969956 + 0.394412252720706 NA intron (NM_177152, intron 1 of 18) intron (NM_177152, intron 1 of 18) 3611 NM_177152 320398 Mm.275586 NM_177152 ENSMUSG00000020105 Lrig3 9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016 leucine-rich repeats and immunoglobulin-like domains 3 protein-coding common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-2 chr10 117148724 117148927 + 0.394412252720706 NA promoter-TSS (NM_177798) promoter-TSS (NM_177798) -351 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-2 chr1 178734171 178734398 + 0.394412252720706 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 205159 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding unique_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-2 chr2 6117941 6118178 + 0.394412252720706 NA intron (NM_144883, intron 1 of 3) intron (NM_144883, intron 1 of 3) 12126 NM_144883 227545 Mm.133542 NM_144883 ENSMUSG00000045319 Proser2 5430407P10Rik|AU067770 proline and serine rich 2 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-42 chr9 72807542 72807839 + 0.394412252720706 NA intron (NM_175485, intron 1 of 19) CpG 416 NM_175485 235472 Mm.31696 NM_175485 ENSMUSG00000036030 Prtg A230098A12Rik|Igdcc5 protogenin protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-24 chr7 98389626 98389846 + 0.394412252720706 NA Intergenic Intergenic -28408 NM_001168539 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-18 chr19 18767270 18767492 + 0.394412252720706 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 17398 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-3 chr3 87170588 87170784 + 0.394412252720706 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 4061 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-38 chr7 34967260 34967489 + 0.394412252720706 NA intron (NM_008820, intron 7 of 14) intron (NM_008820, intron 7 of 14) 54967 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-4 chr17 84109871 84110066 + 0.394412252720706 NA Intergenic Intergenic 31308 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-2 chr10 108184547 108184792 + 0.394412252720706 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 22269 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-11 chr15 85425305 85425522 + 0.394412252720706 NA intron (NM_016843, intron 9 of 11) intron (NM_016843, intron 9 of 11) 77814 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-17 chr16 25353599 25353790 + 0.394412252720706 NA intron (NM_175165, intron 3 of 5) intron (NM_175165, intron 3 of 5) 66877 NM_175165 71338 Mm.126851 NM_175165 ENSMUSG00000048399 Tprg 5430420C16Rik|Tprg1 transformation related protein 63 regulated protein-coding common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-5 chr5 117284983 117285270 + 0.394412252720706 NA intron (NM_018858, intron 3 of 3) (TG)n|Simple_repeat|Simple_repeat 2438 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-11 chr5 100519266 100519466 + 0.394412252720706 NA intron (NM_001359203, intron 1 of 8) intron (NM_001359203, intron 1 of 8) 1057 NM_001359204 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e|SGN4 COP9 signalosome subunit 4 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-25 chr2 110186150 110186396 + 0.394412252720706 NA Intergenic B1_Mus2|SINE|Alu 119452 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-7 chr2 116064066 116064271 + 0.394412252720706 NA 5' UTR (NM_001346044, exon 1 of 14) 5' UTR (NM_001346044, exon 1 of 14) 451 NM_001346044 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-28 chr8 36685778 36685992 + 0.394412252720706 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 47169 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-13 chr6 33868991 33869237 + 0.394412252720706 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -160334 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-9 chr12 40115176 40115426 + 0.394412252720706 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 18927 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-3 chr1 131910055 131910301 + 0.394412252720706 NA promoter-TSS (NM_175294) promoter-TSS (NM_175294) -280 NM_001145804 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-2 chr10 96686407 96686612 + 0.394412252720706 NA Intergenic Intergenic 69508 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-26 chr4 136451281 136451582 + 0.394412252720706 NA Intergenic ID4|SINE|ID -18330 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-7 chr11 86644721 86644967 + 0.394412252720706 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 26431 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-22 chr18 80208694 80208936 + 0.394412252720706 NA intron (NM_025299, intron 2 of 3) intron (NM_025299, intron 2 of 3) 1948 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-2 chr1 82316179 82316377 + 0.394412252720706 NA promoter-TSS (NM_029777) promoter-TSS (NM_029777) -301 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-9 chr6 131292582 131292775 + 0.394412252720706 NA intron (NM_001327860, intron 1 of 5) intron (NM_001327860, intron 1 of 5) 566 NM_001327860 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-23 chr4 116555458 116555649 + 0.394412252720706 NA intron (NM_177670, intron 1 of 2) intron (NM_177670, intron 1 of 2) 390 NM_177670 230657 Mm.291484 NM_177670 ENSMUSG00000055900 Tmem69 A630048M13Rik transmembrane protein 69 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-25 chr7 98697134 98697375 + 0.394412252720706 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 5674 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706 chr10 80675664 80675933 + 0.394412252720706 NA intron (NM_021462, intron 2 of 13) CpG 495 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-3 chr10 95257644 95257866 + 0.394412252720706 NA intron (NM_001330138, intron 2 of 2) intron (NM_001330138, intron 2 of 2) 65954 NM_001330138 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-5 chr13 63246143 63246355 + 0.394412252720706 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 6220 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706 chr1 81759617 81759821 + 0.394412252720706 NA Intergenic Intergenic -372197 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-36 chr7 145199502 145199812 + 0.394412252720706 NA intron (NR_132643, intron 19 of 22) intron (NR_132643, intron 19 of 22) 8462 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-14 chr13 73693032 73693265 + 0.394412252720706 NA promoter-TSS (NM_001359603) promoter-TSS (NM_001359603) -512 NM_001359603 74338 Mm.271635 NM_028878 ENSMUSG00000021565 Slc6a19 4632401C08Rik|B<0>AT1 solute carrier family 6 (neurotransmitter transporter), member 19 protein-coding common_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-8 chr5 91111815 91112115 + 0.394412252720706 NA Intergenic Intergenic -27634 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-33 chr6 118479509 118479754 + 0.394412252720706 NA promoter-TSS (NM_011763) promoter-TSS (NM_011763) -358 NM_011763 22750 Mm.106970 NM_011763 ENSMUSG00000072623 Zfp9 1810048F22Rik|AU016736|Krox-4|Zfp-9|mszf79-2 zinc finger protein 9 protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-3 chr17 26586151 26586388 + 0.394412252720706 NA intron (NM_026170, intron 1 of 9) (TCTA)n|Simple_repeat|Simple_repeat 24757 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-9 chr14 101729221 101729485 + 0.394412252720706 NA promoter-TSS (NM_201529) promoter-TSS (NM_201529) -575 NM_201529 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-18 chr2 130697639 130697872 + 0.394412252720706 NA promoter-TSS (NM_001081162) promoter-TSS (NM_001081162) -236 NM_001081162 269356 Mm.441391 NM_001081162 ENSMUSG00000074796 Slc4a11 AI503023|BTR1|NaBC1 solute carrier family 4, sodium bicarbonate transporter-like, member 11 protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-8 chr4 150871214 150871426 + 0.394412252720706 NA Intergenic Intergenic 16250 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-6 chrX 153434345 153434561 + 0.394412252720706 NA Intergenic B2_Mm2|SINE|B2 -63779 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-2 chr10 75550946 75551146 + 0.394412252720706 NA 3' UTR (NM_198860, exon 4 of 4) 3' UTR (NM_198860, exon 4 of 4) 9284 NM_198860 192734 Mm.259320 NM_198860 ENSMUSG00000046807 Lrrc75b AI646023|Fam211b leucine rich repeat containing 75B protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-28 chr3 52843422 52843775 + 0.394412252720706 NA Intergenic Intergenic 84068 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-33 chr6 29396619 29396869 + 0.394412252720706 NA intron (NM_001347073, intron 1 of 9) intron (NM_001347073, intron 1 of 9) 160 NM_001347073 232664 Mm.251303 NM_145574 ENSMUSG00000029769 Ccdc136 4921511K06Rik|BC006583 coiled-coil domain containing 136 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-4 chr10 68087108 68087344 + 0.394412252720706 NA Intergenic Intergenic 107656 NM_001359319 170799 Mm.209844 NM_133244 ENSMUSG00000037846 Rtkn2 B130039D23Rik|Mbf|Plekhk1 rhotekin 2 protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-9 chr7 4877088 4877313 + 0.394412252720706 NA intron (NM_001101598, intron 1 of 5) CpG 147 NM_001101598 664994 Mm.302624 NM_001101598 ENSMUSG00000086784 Isoc2a Isoc2 isochorismatase domain containing 2a protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-5 chr18 74824435 74824747 + 0.394412252720706 NA Intergenic Intergenic 45379 NM_177470 52538 Mm.245724 NM_177470 ENSMUSG00000036880 Acaa2 0610011L04Rik|AI255831|AI265397|D18Ertd240e acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein-coding common_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-2 chr11 100806591 100806930 + 0.394412252720706 NA intron (NM_001113563, intron 2 of 18) intron (NM_001113563, intron 2 of 18) 15810 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-26 chr7 102565102 102565408 + 0.394412252720706 NA intron (NM_009277, intron 1 of 7) intron (NM_009277, intron 1 of 7) 227 NM_001082552 20821 Mm.321227 NM_009277 ENSMUSG00000030966 Trim21 Ro52|Ssa1 tripartite motif-containing 21 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-12 chr13 49579056 49579364 + 0.394412252720706 NA intron (NM_025495, intron 5 of 7) intron (NM_025495, intron 5 of 7) -3252 NM_012050 27047 Mm.390589 NM_012050 ENSMUSG00000048368 Omd OSAD|SLRR2C osteomodulin protein-coding common_peak1_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-6 chr2 167231783 167231987 + 0.394412252720706 NA intron (NM_008968, intron 1 of 9) intron (NM_008968, intron 1 of 9) 8652 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-27 chr3 31000151 31000415 + 0.394412252720706 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 4512 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-5 chr2 137730050 137730270 + 0.394412252720706 NA Intergenic Intergenic -526424 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-36 chr7 24903013 24903291 + 0.394412252720706 NA TTS (NM_007655) TTS (NM_007655) 166 NM_001130151 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-13 chr16 31502728 31502954 + 0.394412252720706 NA Intergenic Intergenic -73065 NR_152205 100047123 Mm.466711 NR_152205 Gm15743 - predicted gene 15743 ncRNA unique_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-6 chr18 36510778 36511016 + 0.394412252720706 NA intron (NM_010415, intron 3 of 5) intron (NM_010415, intron 3 of 5) 4908 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-5 chr16 87307157 87307380 + 0.394412252720706 NA Intergenic Intergenic -46917 NM_001159331 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding unique_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706 chr1 74278332 74278627 + 0.394412252720706 NA promoter-TSS (NM_174985) promoter-TSS (NM_174985) -121 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak2_13_9_0.216825978477807_3.43034108412627_0.394412252720706-3 chr15 4026134 4026361 + 0.394412252720706 NA promoter-TSS (NM_024188) promoter-TSS (NM_024188) -181 NM_024188 67041 Mm.13445 NM_024188 ENSMUSG00000022186 Oxct1 2610008O03Rik|Oxct|Oxct2a|Scot-s 3-oxoacid CoA transferase 1 protein-coding unique_peak1_14_9_0.315659429885011_3.47975780982987_0.394412252720706-41 chr9 69875175 69875411 + 0.394412252720706 NA Intergenic Intergenic 114147 NR_040765 319970 Mm.186434 NR_040765 ENSMUSG00000097623 B230323A14Rik - RIKEN cDNA B230323A14 gene ncRNA common_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706 chr10 80758227 80758462 + 0.394412252720706 NA intron (NM_199322, intron 1 of 27) PB1D10|SINE|Alu 3141 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding unique_peak1_13_9_0.216825978477807_3.43034108412627_0.394412252720706-16 chr17 23550740 23550992 + 0.394412252720706 NA promoter-TSS (NR_126485) promoter-TSS (NR_126485) 67 NR_126484 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak2_10_12_-0.507154356397543_3.44686253994232_0.394412252720706-6 chr2 167877945 167878247 + 0.394412252720706 NA Intergenic ID_B1|SINE|B4 -54231 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_14_9_0.315659429885011_3.47975780982987_0.394412252720706-6 chr18 58659163 58659374 + 0.394412252720706 NA promoter-TSS (NM_025478) promoter-TSS (NM_025478) -214 NM_025478 66307 Mm.182574 NM_025478 ENSMUSG00000024601 Isoc1 2610034N03Rik isochorismatase domain containing 1 protein-coding common_peak1_54_39_0.176904206463576_5.41038019811915_0.394172396164276 chr15 77862570 77863030 + 0.394172396164276 NA Intergenic Intergenic -20625 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_54_39_0.176904206463576_5.41038019811915_0.394172396164276-2 chr16 13405862 13406529 + 0.394172396164276 NA intron (NM_153588, intron 13 of 14) intron (NM_153588, intron 13 of 14) -43328 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-3 chr11 31870267 31870665 + 0.394172396164276 NA promoter-TSS (NM_001290676) promoter-TSS (NM_001290676) -474 NM_001290676 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-2 chr10 17348342 17348686 + 0.394172396164276 NA Intergenic Intergenic -252732 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_54_39_0.176904206463576_5.41038019811915_0.394172396164276-3 chr16 64851950 64852399 + 0.394172396164276 NA promoter-TSS (NM_001347245) promoter-TSS (NM_001347245) 173 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_54_39_0.176904206463576_5.41038019811915_0.394172396164276-4 chr8 126920354 126921010 + 0.394172396164276 NA Intergenic Intergenic 25239 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak2_46_45_-0.249900652754959_5.39861162967953_0.394172396164276 chr1 158604744 158605381 + 0.394172396164276 NA intron (NM_007495, intron 14 of 22) intron (NM_007495, intron 14 of 22) 99437 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA common_peak2_54_39_0.176904206463576_5.41038019811915_0.394172396164276 chr1 134803995 134804760 + 0.394172396164276 NA promoter-TSS (NR_015606) promoter-TSS (NR_015606) -656 NR_015606 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak2_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-2 chr10 84917266 84917711 + 0.394172396164276 NA promoter-TSS (NM_183172) promoter-TSS (NM_183172) -125 NM_001013441 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak2_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-4 chr5 64234601 64235093 + 0.394172396164276 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 4490 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-5 chr7 113260016 113260457 + 0.394172396164276 NA intron (NM_001243048, intron 2 of 16) intron (NM_001243048, intron 2 of 16) 52771 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_54_39_0.176904206463576_5.41038019811915_0.394172396164276-2 chr3 84730774 84731612 + 0.394172396164276 NA Intergenic Intergenic 65001 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak1_54_39_0.176904206463576_5.41038019811915_0.394172396164276-6 chrX 144317893 144318803 + 0.394172396164276 NA intron (NR_037145, intron 1 of 26) CpG 382 NM_026247 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031 asparagine-linked glycosylation 13 protein-coding common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-7 chr8 95852814 95853344 + 0.394172396164276 NA intron (NM_172758, intron 1 of 11) intron (NM_172758, intron 1 of 11) 412 NM_172758 234595 Mm.29267 NM_172758 ENSMUSG00000036534 Slc38a7 D430050E18 solute carrier family 38, member 7 protein-coding common_peak2_54_39_0.176904206463576_5.41038019811915_0.394172396164276-3 chr4 119118972 119119482 + 0.394172396164276 NA intron (NM_011400, intron 1 of 9) intron (NM_011400, intron 1 of 9) 10482 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-6 chr7 16295041 16295442 + 0.394172396164276 NA Intergenic Intergenic -8446 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276 chr1 194619993 194620696 + 0.394172396164276 NA 5' UTR (NM_008882, exon 1 of 32) 5' UTR (NM_008882, exon 1 of 32) 515 NM_008882 18845 Mm.2251 NM_008882 ENSMUSG00000026640 Plxna2 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 plexin A2 protein-coding common_peak2_54_39_0.176904206463576_5.41038019811915_0.394172396164276-5 chrX 142834608 142835116 + 0.394172396164276 NA 3' UTR (NM_001199360, exon 7 of 7) 3' UTR (NM_001199360, exon 7 of 7) 95862 NR_030523 723976 NR_030523 ENSMUSG00000076011 Mir652 Mirn652|miRX|mmu-mir-652 microRNA 652 ncRNA common_peak2_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-3 chr15 80060639 80061052 + 0.394172396164276 NA Intergenic Intergenic 17734 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_54_39_0.176904206463576_5.41038019811915_0.394172396164276-4 chr6 97311898 97312521 + 0.394172396164276 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -59429 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-5 chr17 29263618 29264429 + 0.394172396164276 NA promoter-TSS (NM_026845) promoter-TSS (NM_026845) -52 NM_026845 68816 Mm.328928 NM_026845 ENSMUSG00000024007 Ppil1 1110060O10Rik|AI327391|Cypl1 peptidylprolyl isomerase (cyclophilin)-like 1 protein-coding common_peak1_54_39_0.176904206463576_5.41038019811915_0.394172396164276-5 chr8 11758621 11758943 + 0.394172396164276 NA intron (NM_017402, intron 1 of 19) intron (NM_017402, intron 1 of 19) 452 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak1_46_45_-0.249900652754959_5.39861162967953_0.394172396164276-4 chr16 32671261 32672078 + 0.394172396164276 NA intron (NM_001110147, intron 9 of 13) intron (NM_001110147, intron 9 of 13) -1485 NM_001347185 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_120_90_0.120516120777628_6.56805270058751_0.394128302109948 chr19 34192293 34193650 + 0.394128302109948 NA promoter-TSS (NM_001360717) promoter-TSS (NM_001360717) 37 NM_001360718 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak1_109_99_-0.15207886799703_6.56781675577621_0.394128302109923 chr13 59769999 59770836 + 0.394128302109923 NA promoter-TSS (NM_026921) promoter-TSS (NM_026921) 451 NR_015349 13996 Mm.490435 NR_015349 Etohd2 AW491659 ethanol decreased 2 ncRNA common_peak2_166_147_-0.119580993602406_7.14966286882775_0.393897261527946 chr10 96617139 96618780 + 0.393897261527946 NA intron (NM_007569, intron 1 of 1) intron (NM_007569, intron 1 of 1) 958 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_148_112_0.106318434110078_6.87333817947023_0.393856228441667 chr3 33799856 33800854 + 0.393856228441667 NA exon (NM_025978, exon 1 of 10) exon (NM_025978, exon 1 of 10) 172 NM_001290500 67120 Mm.275710 NM_025978 ENSMUSG00000027677 Ttc14 2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980 tetratricopeptide repeat domain 14 protein-coding common_peak2_149_112_0.115900522391331_6.87812922361085_0.393856228441667 chr9 119981603 119982940 + 0.393856228441667 NA intron (NM_153287, intron 1 of 4) L2a|LINE|L2 752 NM_001357560 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_95_71_0.12684068585645_6.23334534437054_0.393723457908232 chr2 121867051 121868117 + 0.393723457908232 NA promoter-TSS (NM_001205371) promoter-TSS (NM_001205371) -121 NM_001205371 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak2_86_79_-0.166179471282642_6.23883835924604_0.393723457908232-3 chr4 86748650 86749525 + 0.393723457908232 NA intron (NM_184088, intron 1 of 31) CpG 532 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_86_79_-0.166179471282642_6.23883835924604_0.393723457908232 chr12 80109626 80110837 + 0.393723457908232 NA exon (NM_007564, exon 2 of 2) exon (NM_007564, exon 2 of 2) 2782 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_95_71_0.12684068585645_6.23334534437054_0.393723457908232-2 chr6 149309370 149310436 + 0.393723457908232 NA 5' UTR (NM_001289662, exon 1 of 5) 5' UTR (NM_001289662, exon 1 of 5) 489 NM_001289662 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak2_96_71_0.141685552968766_6.2407677779267_0.393723457908232 chr6 142387215 142387895 + 0.393723457908232 NA promoter-TSS (NM_001204907) promoter-TSS (NM_001204907) 312 NM_025872 66964 Mm.3676 NM_025872 ENSMUSG00000030245 Golt1b 2310061A22Rik|AA407874|AU024291|CGI-141 golgi transport 1B protein-coding common_peak1_95_71_0.12684068585645_6.23334534437054_0.393723457908232 chr3 96575981 96577450 + 0.393723457908232 NA Intergenic Intergenic -9914 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 - predicted gene 15441 ncRNA common_peak2_86_79_-0.166179471282642_6.23883835924604_0.393723457908232 chr12 73286380 73287834 + 0.393723457908232 NA promoter-TSS (NM_029580) promoter-TSS (NM_029580) 259 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding common_peak2_86_79_-0.166179471282642_6.23883835924604_0.393723457908232-2 chr2 11602631 11603293 + 0.393723457908232 NA intron (NM_152824, intron 1 of 11) CpG 237 NM_152824 76938 Mm.182769 NM_152824 ENSMUSG00000037197 Rbm17 2700027J02Rik RNA binding motif protein 17 protein-coding common_peak1_65_61_-0.19418530556236_5.85710365760569_0.393610822453566-4 chr5 134313275 134314517 + 0.393610822453566 NA intron (NM_001359066, intron 1 of 32) CpG 864 NM_001359063 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak1_65_61_-0.19418530556236_5.85710365760569_0.393610822453566-5 chr9 123465238 123465737 + 0.393610822453566 NA Intergenic Intergenic -13214 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak1_65_61_-0.19418530556236_5.85710365760569_0.393610822453566 chr1 71691804 71692424 + 0.393610822453566 NA Intergenic Intergenic 38779 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak2_65_61_-0.19418530556236_5.85710365760569_0.393610822453566 chr5 3928145 3929174 + 0.393610822453566 NA intron (NM_194462, intron 1 of 47) intron (NM_194462, intron 1 of 47) 473 NM_194462 100986 Mm.46044 NM_194462 ENSMUSG00000040407 Akap9 5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12 A kinase (PRKA) anchor protein (yotiao) 9 protein-coding common_peak1_65_61_-0.19418530556236_5.85710365760569_0.393610822453566-2 chr15 66888201 66888760 + 0.393610822453566 NA Intergenic Intergenic -2913 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_65_61_-0.19418530556236_5.85710365760569_0.393610822453566-3 chr17 70746357 70746825 + 0.393610822453566 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 100186 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_73_54_0.142546047959538_5.85263273750443_0.393610822453554-2 chr8 47675362 47676115 + 0.393610822453554 NA promoter-TSS (NM_023503) promoter-TSS (NM_023503) -579 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak1_73_54_0.142546047959538_5.85263273750443_0.393610822453554-3 chr9 20606916 20607842 + 0.393610822453554 NA promoter-TSS (NR_033729) promoter-TSS (NR_033729) -96 NR_033729 66662 Mm.477847 NM_175110 ENSMUSG00000062470 Fbxl12os 5730577I03Rik F-box and leucine-rich repeat protein 12, opposite strand pseudo common_peak2_73_54_0.142546047959538_5.85263273750443_0.393610822453554-2 chr3 31017306 31018005 + 0.393610822453554 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) -21311 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak1_73_54_0.142546047959538_5.85263273750443_0.393610822453554 chr15 97907761 97908589 + 0.393610822453554 NA intron (NM_009504, intron 1 of 9) CpG 121 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding common_peak2_73_54_0.142546047959538_5.85263273750443_0.393610822453554 chr2 121139969 121140584 + 0.393610822453554 NA promoter-TSS (NM_001290812) promoter-TSS (NM_001290812) -152 NM_001355748 75894 Mm.384805 NM_029475 ENSMUSG00000027259 Adal 4930578F03Rik adenosine deaminase-like protein-coding common_peak1_180_137_0.0966701332799573_7.15685952341815_0.393245236354563-2 chr13 107887943 107889495 + 0.393245236354563 NA intron (NM_145456, intron 2 of 14) CpG 1345 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_180_137_0.0966701332799573_7.15685952341815_0.393245236354563 chr1 155237677 155239760 + 0.393245236354563 NA Intergenic Intergenic 80015 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_180_137_0.0966701332799573_7.15685952341815_0.393245236354563-3 chr9 14379553 14382063 + 0.393245236354563 NA exon (NM_028013, exon 1 of 2) exon (NM_028013, exon 1 of 2) 434 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak2_121_91_0.116539133672619_6.58183152289332_0.393152724387913 chr7 64871925 64873242 + 0.393152724387913 NA exon (NM_023239, exon 1 of 1) exon (NM_023239, exon 1 of 1) 457 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak1_121_91_0.116539133672619_6.58183152289332_0.393152724387913 chr5 66617589 66618745 + 0.393152724387913 NA intron (NM_001310626, intron 1 of 15) CpG 650 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-6 chr7 16923030 16923773 + 0.393151991482011 NA intron (NM_007590, intron 1 of 5) intron (NM_007590, intron 1 of 5) 631 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|Cam3|Camc|R75142 calmodulin 3 protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-3 chr14 54883571 54883901 + 0.393151991482011 NA intron (NM_007537, intron 1 of 3) intron (NM_007537, intron 1 of 3) 311 NM_007537 12050 Mm.6967 NM_007537 ENSMUSG00000089682 Bcl2l2 AW048834|Bcl-w|Gtrgal2|Gtrosa41|bclw|c98 BCL2-like 2 protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-9 chr9 49816506 49817178 + 0.393151991482011 NA Intergenic MIR|SINE|MIR -17449 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-10 chr9 96775235 96775888 + 0.393151991482011 NA Intergenic B4A|SINE|B4 9999 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-4 chr15 100494725 100495232 + 0.393151991482011 NA intron (NM_153407, intron 1 of 4) CpG 261 NM_153407 207785 Mm.294969 NM_153407 ENSMUSG00000044636 Csrnp2 CSRNP-2|Csnrp2|taip-12 cysteine-serine-rich nuclear protein 2 protein-coding unique_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011 chr10 43634947 43635471 + 0.393151991482011 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 41782 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA common_peak1_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-2 chr16 10843849 10844408 + 0.393151991482011 NA TTS (NM_001162932) TTS (NM_001162932) 9069 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-7 chr7 64249005 64249327 + 0.393151991482011 NA TTS (NR_105844) TTS (NR_105844) 933 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-2 chr1 88995522 88996178 + 0.393151991482011 NA Intergenic B4A|SINE|B4 -20263 NR_040471 73475 Mm.491040 NR_040471 ENSMUSG00000099378 1700067G17Rik - RIKEN cDNA 1700067G17 gene ncRNA unique_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-2 chr5 35005749 35006396 + 0.393151991482011 NA intron (NM_173402, intron 4 of 16) intron (NM_173402, intron 4 of 16) 6994 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-5 chr2 137455956 137456364 + 0.393151991482011 NA Intergenic Intergenic -339640 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-3 chr8 122174394 122174660 + 0.393151991482011 NA Intergenic Intergenic -107614 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_32_32_-0.277328134960695_4.90573005187811_0.393151991482011 chr15 79454613 79454969 + 0.393151991482011 NA Intergenic Intergenic -12648 NM_001359863 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011 chr1 71918904 71919485 + 0.393151991482011 NA Intergenic Intergenic 31082 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_32_32_-0.277328134960695_4.90573005187811_0.393151991482011-8 chr8 126663397 126663819 + 0.393151991482011 NA Intergenic Intergenic -70172 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004-4 chr5 34659739 34660094 + 0.393151991482004 NA promoter-TSS (NM_019497) promoter-TSS (NM_019497) 232 NM_029278 75416 Mm.40292 NM_029278 ENSMUSG00000036693 Nop14 2610033H07Rik|Nol14 NOP14 nucleolar protein protein-coding common_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004-5 chr5 125475916 125476390 + 0.393151991482004 NA intron (NM_030210, intron 1 of 17) CpG 280 NM_030210 78894 Mm.431573 NM_030210 ENSMUSG00000029482 Aacs 2210408B16Rik|SUR5 acetoacetyl-CoA synthetase protein-coding common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004-5 chr17 83350955 83351320 + 0.393151991482004 NA 5' UTR (NM_001286567, exon 1 of 24) 5' UTR (NM_001286567, exon 1 of 24) 206 NM_001357886 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding unique_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004 chrX 160501936 160502477 + 0.393151991482004 NA promoter-TSS (NM_001358968) promoter-TSS (NM_001358968) 44 NM_001177878 110094 Mm.350712 NM_172783 ENSMUSG00000031295 Phka2 6330505C01Rik|D330034O08|Phk phosphorylase kinase alpha 2 protein-coding common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004 chr1 51478634 51479010 + 0.393151991482004 NA promoter-TSS (NM_001310549) promoter-TSS (NM_001310549) -423 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004-6 chr5 34659789 34660088 + 0.393151991482004 NA promoter-TSS (NM_019497) promoter-TSS (NM_019497) 210 NM_029278 75416 Mm.40292 NM_029278 ENSMUSG00000036693 Nop14 2610033H07Rik|Nol14 NOP14 nucleolar protein protein-coding common_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004-2 chr2 116980778 116981089 + 0.393151991482004 NA Intergenic Intergenic 80781 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA unique_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004 chr3 51219846 51220389 + 0.393151991482004 NA Intergenic Intergenic -4330 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004-3 chr3 152714167 152714492 + 0.393151991482004 NA intron (NM_025662, intron 1 of 10) CpG 229 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004-3 chr11 62624156 62624782 + 0.393151991482004 NA intron (NM_198861, intron 1 of 3) intron (NM_198861, intron 1 of 3) 19939 NR_028541 100217444 NR_028541 Snord65 MBII-135|snoRNA135 small nucleolar RNA, C/D box 65 snoRNA common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004-4 chr13 59556791 59557261 + 0.393151991482004 NA promoter-TSS (NM_001284219) promoter-TSS (NM_001284219) -104 NM_001284219 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004 chr16 14159617 14159945 + 0.393151991482004 NA promoter-TSS (NM_001081154) promoter-TSS (NM_001081154) 155 NR_030252 723916 NR_030252 ENSMUSG00000070074 Mir484 Mirn484|mir-484|mmu-mir-484 microRNA 484 ncRNA common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004-2 chr10 30802517 30803125 + 0.393151991482004 NA intron (NM_001358842, intron 1 of 14) CpG 505 NM_001358841 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding common_peak2_38_27_0.199018854624965_4.90686434937009_0.393151991482004-7 chr5 121836343 121836726 + 0.393151991482004 NA promoter-TSS (NM_001306126) promoter-TSS (NM_001306126) 325 NM_001306128 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak1_38_27_0.199018854624965_4.90686434937009_0.393151991482004-6 chr6 35425093 35425589 + 0.393151991482004 NA Intergenic Intergenic 94495 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak1_137_123_-0.13756238593641_6.88541511741867_0.393069092090684 chr8 71922396 71923666 + 0.393069092090684 NA intron (NM_133358, intron 1 of 3) CpG 206 NM_133358 170938 Mm.480419 NM_133358 ENSMUSG00000066880 Zfp617 Zfps11-6 zinc finger protein 617 protein-coding common_peak1_150_113_0.112707890092298_6.88924395921089_0.393069092090684 chr10 116949042 116950308 + 0.393069092090684 NA promoter-TSS (NR_038025) promoter-TSS (NR_038025) 778 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak1_150_113_0.112707890092298_6.88924395921089_0.393069092090684-2 chr6 142338416 142340285 + 0.393069092090684 NA Intergenic RLTR49|LTR|ERVK -6347 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_236_206_-0.102138668569839_7.64241762321441_0.393020921125929 chr15 77910835 77913281 + 0.393020921125929 NA Intergenic Intergenic 16936 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-17 chr7 135210895 135211236 + 0.392630012299441 NA Intergenic Intergenic -15063 NR_046050 74314 Mm.415339 NR_046050 ENSMUSG00000100717 1700120G07Rik - RIKEN cDNA 1700120G07 gene ncRNA unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-8 chr15 41791459 41791847 + 0.392630012299441 NA intron (NM_001130163, intron 1 of 13) intron (NM_001130163, intron 1 of 13) 2138 NM_130885 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-21 chr9 119937047 119937408 + 0.392630012299441 NA promoter-TSS (NM_028735) promoter-TSS (NM_028735) 331 NM_028976 74498 Mm.104789 NM_028976 ENSMUSG00000032513 Gorasp1 5430411C10Rik|GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-3 chr11 55470039 55470432 + 0.392630012299441 NA intron (NM_013716, intron 1 of 11) intron (NM_013716, intron 1 of 11) 483 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-2 chr10 61382933 61383288 + 0.392630012299441 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 413 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-23 chr7 47008023 47008312 + 0.392630012299441 NA 5' UTR (NM_175318, exon 1 of 6) 5' UTR (NM_175318, exon 1 of 6) 247 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-3 chr14 76152348 76152598 + 0.392630012299441 NA Intergenic Intergenic 41582 NM_013745 27275 Mm.21138 NM_013745 ENSMUSG00000022009 Nufip1 Nufip nuclear fragile X mental retardation protein interacting protein 1 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-7 chr19 6877423 6877745 + 0.392630012299441 NA Intergenic RLTR19-int|LTR|ERVK -19373 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-14 chr6 146959877 146960120 + 0.392630012299441 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -5577 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-17 chr9 44488119 44488539 + 0.392630012299441 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) 5504 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-8 chr12 8386960 8387391 + 0.392630012299441 NA Intergenic MIRb|SINE|MIR 73742 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-6 chr15 64476759 64477113 + 0.392630012299441 NA Intergenic L2a|LINE|L2 -94017 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-14 chr2 128416881 128417220 + 0.392630012299441 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 12301 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-10 chr17 35059021 35059567 + 0.392630012299441 NA TTS (NM_033444) TTS (NM_033444) 259 NM_016765 51793 Mm.1457 NM_016765 ENSMUSG00000007039 Ddah2 1110003M04Rik|AU019324|AW413173|DDAH-2|DDAHII|Ddah|G6a|NG30 dimethylarginine dimethylaminohydrolase 2 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-7 chr14 122904586 122905147 + 0.392630012299441 NA intron (NM_145466, intron 1 of 2) intron (NM_145466, intron 1 of 2) -8164 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-14 chr5 64810665 64811076 + 0.392630012299441 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 7347 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-6 chr16 44631378 44631648 + 0.392630012299441 NA Intergenic Intergenic -72643 NM_172506 117606 Mm.41561 NM_172506 ENSMUSG00000022687 Boc 4732455C11|mFLJ00376 biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-11 chr9 41589379 41589905 + 0.392630012299441 NA intron (NR_015483, intron 1 of 1) C-rich|Low_complexity|Low_complexity 7716 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-3 chr11 51922886 51923258 + 0.392630012299441 NA Intergenic Intergenic -44559 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-3 chr14 33334465 33334781 + 0.392630012299441 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 76401 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-15 chr5 104397745 104398182 + 0.392630012299441 NA Intergenic Intergenic -37148 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-4 chr18 82914821 82915158 + 0.392630012299441 NA intron (NM_001177464, intron 1 of 5) intron (NM_001177464, intron 1 of 5) 357 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-6 chr19 6067309 6067755 + 0.392630012299441 NA TTS (NM_001081041) TTS (NM_001081041) 318 NM_028454 73166 Mm.489613 NM_028454 ENSMUSG00000024799 Tm7sf2 3110041O18Rik|ANG1|C14SR|Dhcr14 transmembrane 7 superfamily member 2 protein-coding unique_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441 chr1 164508405 164508710 + 0.392630012299441 NA intron (NR_151593, intron 2 of 2) intron (NR_151593, intron 2 of 2) 5250 NR_151593 102635083 Mm.98705 NR_151593 ENSMUSG00000097281 Gm26685 - predicted gene, 26685 ncRNA common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-15 chr2 180229916 180230261 + 0.392630012299441 NA Intergenic Intergenic -4229 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-12 chr4 100188648 100189057 + 0.392630012299441 NA intron (NM_013845, intron 1 of 8) MIR3|SINE|MIR 93061 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-20 chr8 11371254 11371471 + 0.392630012299441 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -58536 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-12 chr7 127194714 127195083 + 0.392630012299441 NA exon (NM_027353, exon 4 of 7) exon (NM_027353, exon 4 of 7) 1179 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-8 chr13 110924344 110924868 + 0.392630012299441 NA Intergenic Intergenic -20760 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-3 chr11 54113620 54114063 + 0.392630012299441 NA intron (NM_001136076, intron 5 of 15) intron (NM_001136076, intron 5 of 15) 12917 NM_011031 18452 Mm.3705 NM_011031 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-11 chr6 70843606 70843949 + 0.392630012299441 NA promoter-TSS (NM_010121) promoter-TSS (NM_010121) -738 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441 chr1 77847748 77848030 + 0.392630012299441 NA Intergenic Intergenic -332801 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding unique_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-4 chr16 4593168 4593631 + 0.392630012299441 NA Intergenic Intergenic -1314 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-5 chr11 95414303 95414564 + 0.392630012299441 NA intron (NM_001359107, intron 1 of 9) intron (NM_001359107, intron 1 of 9) 350 NM_001359107 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-10 chr6 100710841 100711040 + 0.392630012299441 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 6206 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-25 chr9 41478012 41478461 + 0.392630012299441 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 3343 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-16 chr8 122990819 122991185 + 0.392630012299441 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 51282 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-4 chr10 4270148 4270659 + 0.392630012299441 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 4074 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-9 chr16 86142293 86142682 + 0.392630012299441 NA Intergenic Intergenic -241362 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-11 chr3 59139138 59139394 + 0.392630012299441 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) -6804 NM_001287120 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-13 chr3 121595102 121595431 + 0.392630012299441 NA Intergenic Intergenic 48219 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-9 chr3 90220593 90220949 + 0.392630012299441 NA promoter-TSS (NM_026677) promoter-TSS (NM_026677) -13 NM_026677 68328 Mm.29355 NM_026677 ENSMUSG00000027935 Rab13 0610007N03Rik|B230212B15Rik RAB13, member RAS oncogene family protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-21 chr8 24404257 24404661 + 0.392630012299441 NA Intergenic Intergenic 34487 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-13 chrX 36874844 36875105 + 0.392630012299441 NA intron (NM_019668, intron 2 of 5) CpG-15640 679 NM_019668 22209 Mm.395649 NM_019668 ENSMUSG00000016308 Ube2a HHR6A|HR6A|Mhr6a ubiquitin-conjugating enzyme E2A protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-2 chr11 63132414 63132854 + 0.392630012299441 NA promoter-TSS (NM_001302259) promoter-TSS (NM_001302259) 65 NM_001302259 18858 Mm.1237 NM_008885 ENSMUSG00000018217 Pmp22 22kDa|Gas-3|HNPP|TRE002|Tr|trembler peripheral myelin protein 22 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-6 chr11 118361005 118361255 + 0.392630012299441 NA Intergenic Intergenic -5719 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-13 chr8 11636111 11636402 + 0.392630012299441 NA promoter-TSS (NM_001281975) promoter-TSS (NM_001281975) -499 NM_001281974 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441 chr1 23202593 23202802 + 0.392630012299441 NA Intergenic Intergenic -69572 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-2 chr10 127542775 127543306 + 0.392630012299441 NA intron (NM_008512, intron 77 of 88) intron (NM_008512, intron 77 of 88) -8481 NM_183297 104080 Mm.437200 NM_183297 ENSMUSG00000040258 Nxph4 1110036M10Rik|AI851051 neurexophilin 4 protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-4 chr3 95662777 95663244 + 0.392630012299441 NA 3' UTR (NM_008562, exon 3 of 3) 3' UTR (NM_008562, exon 3 of 3) 4289 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-4 chr12 82257651 82258153 + 0.392630012299441 NA intron (NM_001167983, intron 2 of 23) intron (NM_001167983, intron 2 of 23) -53447 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-5 chr19 5038956 5039226 + 0.392630012299441 NA exon (NM_175383, exon 1 of 2) exon (NM_175383, exon 1 of 2) 265 NM_175383 108902 Mm.29628 NM_175383 ENSMUSG00000047379 B4gat1 1500032M01Rik|B3gnt1|B3gnt6|BETA3GNT1|iGAT|iGNT beta-1,4-glucuronyltransferase 1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-4 chr11 70918576 70918949 + 0.392630012299441 NA intron (NM_019400, intron 9 of 17) intron (NM_019400, intron 9 of 17) 51211 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-12 chr9 63656970 63657338 + 0.392630012299441 NA intron (NM_016769, intron 5 of 8) intron (NM_016769, intron 5 of 8) 54508 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-21 chr6 72544425 72544691 + 0.392630012299441 NA promoter-TSS (NM_001271415) promoter-TSS (NM_001271415) 21 NM_001271415 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-2 chr10 17366070 17366275 + 0.392630012299441 NA Intergenic Intergenic -270390 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-16 chr8 22858672 22858995 + 0.392630012299441 NA promoter-TSS (NM_001081149) promoter-TSS (NM_001081149) -706 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-12 chr17 46874511 46874826 + 0.392630012299441 NA Intergenic Intergenic -15953 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-7 chr7 28587964 28588449 + 0.392630012299441 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 9978 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-16 chr6 29736450 29736743 + 0.392630012299441 NA intron (NM_176996, intron 1 of 11) intron (NM_176996, intron 1 of 11) 1099 NM_176996 319757 Mm.29279 NM_176996 ENSMUSG00000001761 Smo E130215L21Rik|Smoh|bnb|smoothened smoothened, frizzled class receptor protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-12 chr5 64878573 64878961 + 0.392630012299441 NA Intergenic Intergenic 53932 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-13 chr8 33878391 33878784 + 0.392630012299441 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 51276 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-12 chr3 10367071 10367270 + 0.392630012299441 NA exon (NM_025519, exon 1 of 5) exon (NM_025519, exon 1 of 5) 197 NM_025519 66371 Mm.366147 NM_025519 ENSMUSG00000027536 Chmp4c 2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3 charged multivesicular body protein 4C protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-5 chr13 28671870 28672460 + 0.392630012299441 NA intron (NR_045054, intron 3 of 7) intron (NR_045054, intron 3 of 7) 38708 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441 chr15 101990504 101990820 + 0.392630012299441 NA Intergenic Intergenic 13680 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441 chr1 138288503 138288825 + 0.392630012299441 NA 3' UTR (NM_177397, exon 3 of 3) 3' UTR (NM_177397, exon 3 of 3) 14926 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-5 chr11 77981941 77982262 + 0.392630012299441 NA promoter-TSS (NM_174852) promoter-TSS (NM_174852) -715 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441 chr1 151230251 151230659 + 0.392630012299441 NA Intergenic Intergenic 92421 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-7 chr11 106920996 106921261 + 0.392630012299441 NA promoter-TSS (NM_025481) promoter-TSS (NM_025481) -413 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-11 chr4 58189929 58190430 + 0.392630012299441 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 16417 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-19 chr8 126824539 126824832 + 0.392630012299441 NA Intergenic Intergenic -24335 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-2 chr1 121326993 121327434 + 0.392630012299441 NA intron (NM_178082, intron 1 of 5) intron (NM_178082, intron 1 of 5) 465 NM_001271531 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-8 chr16 8470892 8471183 + 0.392630012299441 NA intron (NM_146247, intron 1 of 10) intron (NM_146247, intron 1 of 10) 224 NM_146247 239706 Mm.214953 NM_146247 ENSMUSG00000039345 Mettl22 - methyltransferase like 22 protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441 chr11 53773505 53773917 + 0.392630012299441 NA exon (NM_001159396, exon 4 of 10) exon (NM_001159396, exon 4 of 10) 3238 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-8 chr3 51194972 51195284 + 0.392630012299441 NA Intergenic Intergenic -29319 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-22 chr8 24484348 24484632 + 0.392630012299441 NA TTS (NR_035483).2 TTS (NR_035483).2 496 NR_035483 unique_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-6 chr2 118521913 118522336 + 0.392630012299441 NA Intergenic Intergenic 22463 NR_138603 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-8 chr18 82914878 82915166 + 0.392630012299441 NA intron (NM_001177464, intron 1 of 5) intron (NM_001177464, intron 1 of 5) 390 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-10 chr5 104435721 104436420 + 0.392630012299441 NA promoter-TSS (NM_001204233) promoter-TSS (NM_001204233) -122 NM_001204233 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-20 chr9 96771726 96772076 + 0.392630012299441 NA intron (NR_102296, intron 4 of 4) intron (NR_102296, intron 4 of 4) 6339 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-5 chr12 76528010 76528489 + 0.392630012299441 NA Intergenic Intergenic 4963 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-8 chr15 3435472 3435737 + 0.392630012299441 NA intron (NM_001048178, intron 2 of 8) intron (NM_001048178, intron 2 of 8) -132078 NM_001357801 100039139 Mm.455610 NM_001166063 ENSMUSG00000091119 Ccdc152 - coiled-coil domain containing 152 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-10 chr15 102406341 102406782 + 0.392630012299441 NA intron (NM_013672, intron 1 of 5) CpG-5406 245 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-14 chr7 118855805 118856132 + 0.392630012299441 NA promoter-TSS (NM_001168220) promoter-TSS (NM_001168220) 30 NM_001168218 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-14 chr4 106910970 106911214 + 0.392630012299441 NA promoter-TSS (NM_023672) promoter-TSS (NM_023672) -378 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-13 chr6 85370251 85370738 + 0.392630012299441 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) 4140 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-5 chr15 37754990 37755295 + 0.392630012299441 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) -20511 NM_001359843 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-26 chr8 18726194 18726455 + 0.392630012299441 NA intron (NM_007426, intron 1 of 8) intron (NM_007426, intron 1 of 8) 15238 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-4 chr11 59654534 59655022 + 0.392630012299441 NA Intergenic MIR|SINE|MIR -7717 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-6 chr6 97176057 97176336 + 0.392630012299441 NA exon (NM_001081111, exon 2 of 17) exon (NM_001081111, exon 2 of 17) 2928 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-7 chr14 61648945 61649234 + 0.392630012299441 NA intron (NR_028264, intron 1 of 6) CpG -16979 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-2 chr10 19012823 19013313 + 0.392630012299441 NA intron (NM_009397, intron 1 of 8) intron (NM_009397, intron 1 of 8) -1105 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-2 chr14 31658112 31658629 + 0.392630012299441 NA intron (NM_025295, intron 1 of 3) intron (NM_025295, intron 1 of 3) 17313 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-23 chr8 109155186 109155429 + 0.392630012299441 NA intron (NR_151498, intron 1 of 4) intron (NR_151498, intron 1 of 4) 80085 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-6 chr2 94288366 94288713 + 0.392630012299441 NA Intergenic Intergenic -27140 NR_030431 735259 NR_030431 ENSMUSG00000076335 Mir670 Mirn670|mir-670|mmu-mir-670 microRNA 670 ncRNA unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441 chr10 20951922 20952405 + 0.392630012299441 NA promoter-TSS (NM_026203) promoter-TSS (NM_026203) -384 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-13 chr3 131271664 131272005 + 0.392630012299441 NA intron (NM_008212, intron 1 of 7) CpG 267 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-11 chr19 46963115 46963341 + 0.392630012299441 NA promoter-TSS (NR_028353) promoter-TSS (NR_028353) -877 NR_028353 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-11 chr6 55438440 55438674 + 0.392630012299441 NA Intergenic Intergenic -13421 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-18 chr5 5181249 5181664 + 0.392630012299441 NA intron (NM_011074, intron 5 of 14) intron (NM_011074, intron 5 of 14) 84612 NM_001310448 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-13 chr5 53490371 53490663 + 0.392630012299441 NA Intergenic Intergenic -65262 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-5 chr11 84513703 84513981 + 0.392630012299441 NA promoter-TSS (NM_019816) promoter-TSS (NM_019816) -341 NM_019816 56321 Mm.257482 NM_019816 ENSMUSG00000018697 Aatf 4933415H02Rik|5830465M17Rik|Che-1|Trb apoptosis antagonizing transcription factor protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-10 chr17 34590067 34590354 + 0.392630012299441 NA 5' UTR (NM_134116, exon 1 of 4) 5' UTR (NM_134116, exon 1 of 4) 404 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-11 chr7 31041328 31041666 + 0.392630012299441 NA 5' UTR (NM_001111073, exon 1 of 8) 5' UTR (NM_001111073, exon 1 of 8) 342 NM_001111073 18301 Mm.1870 NM_008761 ENSMUSG00000009687 Fxyd5 EF-8|Oit2|RIC FXYD domain-containing ion transport regulator 5 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-2 chr11 33839850 33840142 + 0.392630012299441 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) 3589 NM_027398 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-12 chr7 25712124 25712468 + 0.392630012299441 NA 3' UTR (NM_028771, exon 5 of 5) 3' UTR (NM_028771, exon 5 of 5) 6757 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-4 chr11 94133635 94134047 + 0.392630012299441 NA Intergenic Intergenic -77613 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-18 chr6 134641126 134641425 + 0.392630012299441 NA intron (NM_026371, intron 1 of 3) CpG 335 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-2 chr1 179044020 179044315 + 0.392630012299441 NA intron (NM_027188, intron 9 of 11) intron (NM_027188, intron 9 of 11) 473874 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-7 chr12 79541895 79542324 + 0.392630012299441 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 244758 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-15 chr8 25537564 25537797 + 0.392630012299441 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 18403 NR_110510 102633315 Mm.437828 NR_110510 ENSMUSG00000086134 Gm16159 - predicted gene 16159 ncRNA common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-7 chr11 69070486 69070731 + 0.392630012299441 NA promoter-TSS (NM_025838) promoter-TSS (NM_025838) -201 NM_025838 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-6 chr13 40916284 40916582 + 0.392630012299441 NA intron (NM_008105, intron 1 of 2) intron (NM_008105, intron 1 of 2) -1201 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-19 chr6 135253081 135253377 + 0.392630012299441 NA intron (NM_001080553, intron 1 of 5) intron (NM_001080553, intron 1 of 5) 1107 NM_010352 14840 Mm.272306 NM_010352 ENSMUSG00000030206 Gsg1 - germ cell associated 1 protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-2 chr10 91198698 91199113 + 0.392630012299441 NA Intergenic Intergenic 21714 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441 chr1 40441010 40441427 + 0.392630012299441 NA intron (NM_001025602, intron 2 of 10) intron (NM_001025602, intron 2 of 10) 1589 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-3 chr11 79752997 79753434 + 0.392630012299441 NA Intergenic Intergenic 26815 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-27 chr9 47283594 47283829 + 0.392630012299441 NA Intergenic Intergenic -246459 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-9 chr4 44981516 44981919 + 0.392630012299441 NA intron (NM_080289, intron 1 of 8) intron (NM_080289, intron 1 of 8) 323 NM_001312880 76238 Mm.196574 NM_080289 ENSMUSG00000035637 Grhpr 1110059D05Rik|6430629L09Rik|Glxr glyoxylate reductase/hydroxypyruvate reductase protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-10 chr2 52437768 52438101 + 0.392630012299441 NA intron (NM_001037099, intron 12 of 13) intron (NM_001037099, intron 12 of 13) -13060 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-7 chr3 79904436 79904699 + 0.392630012299441 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 18637 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-24 chr8 123858802 123859167 + 0.392630012299441 NA intron (NM_028536, intron 2 of 3) intron (NM_028536, intron 2 of 3) 1225 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-12 chr6 135070265 135070626 + 0.392630012299441 NA intron (NM_181444, intron 1 of 3) intron (NM_181444, intron 1 of 3) 4783 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-10 chr3 137292825 137293076 + 0.392630012299441 NA Intergenic Intergenic -48128 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-3 chr11 78887351 78887710 + 0.392630012299441 NA Intergenic Intergenic -33257 NM_010927 18126 Mm.2893 NM_010927 ENSMUSG00000020826 Nos2 MAC-NOS|NOS-II|Nos-2|Nos2a|i-NOS|iNOS nitric oxide synthase 2, inducible protein-coding unique_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-2 chr15 102459402 102459670 + 0.392630012299441 NA 5' UTR (NM_025385, exon 2 of 5) 5' UTR (NM_025385, exon 2 of 5) 366 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-5 chr12 108396434 108396840 + 0.392630012299441 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -13996 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-9 chr19 10144802 10145182 + 0.392630012299441 NA Intergenic Intergenic -37896 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-16 chr7 84151677 84151900 + 0.392630012299441 NA exon (NM_133722, exon 1 of 3) exon (NM_133722, exon 1 of 3) 105 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-22 chr9 123528860 123529323 + 0.392630012299441 NA promoter-TSS (NM_030692) promoter-TSS (NM_030692) -662 NM_001357485 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-5 chr4 125114959 125115274 + 0.392630012299441 NA Intergenic Intergenic 12765 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-11 chr4 137048292 137048605 + 0.392630012299441 NA intron (NM_198248, intron 1 of 18) CpG 247 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-24 chr7 83430851 83431218 + 0.392630012299441 NA Intergenic Intergenic -153897 NM_177695 233424 Mm.486619 NM_177695 ENSMUSG00000038540 Tmc3 9030203A06 transmembrane channel-like gene family 3 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-2 chr10 12804236 12804550 + 0.392630012299441 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 57342 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-4 chr9 56100748 56101042 + 0.392630012299441 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 10919 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding unique_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441 chr9 21723767 21724210 + 0.392630012299441 NA intron (NM_001252659, intron 1 of 17) intron (NM_001252659, intron 1 of 17) 412 NM_010700 16835 Mm.3213 NM_010700 ENSMUSG00000032193 Ldlr Hlb301 low density lipoprotein receptor protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-9 chr2 117018338 117018577 + 0.392630012299441 NA Intergenic Intergenic -102614 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-8 chr9 13497361 13497735 + 0.392630012299441 NA Intergenic Intergenic 66187 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-8 chr4 59819309 59819630 + 0.392630012299441 NA intron (NM_172468, intron 1 of 8) intron (NM_172468, intron 1 of 8) 13819 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-11 chr18 69344135 69344380 + 0.392630012299441 NA promoter-TSS (NM_013685) promoter-TSS (NM_013685) -235 NM_013685 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-11 chr16 13589485 13589893 + 0.392630012299441 NA intron (NM_001358453, intron 20 of 22) B3A|SINE|B2 -69270 NR_037997 70100 Mm.158330 NR_037997 ENSMUSG00000099411 2310015D24Rik - RIKEN cDNA 2310015D24 gene ncRNA unique_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-3 chr17 28327661 28328060 + 0.392630012299441 NA promoter-TSS (NM_011287) promoter-TSS (NM_011287) -611 NM_011287 19896 Mm.336955 NM_011287 ENSMUSG00000037805 Rpl10a CsA-19|Nedd6 ribosomal protein L10A protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-7 chr15 95370233 95370459 + 0.392630012299441 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 157668 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-9 chr15 84654514 84654826 + 0.392630012299441 NA Intergenic Intergenic -8536 NM_001346662 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-3 chr11 78176819 78177025 + 0.392630012299441 NA promoter-TSS (NM_080849) promoter-TSS (NM_080849) -256 NM_080849 140859 Mm.23788 NM_080849 ENSMUSG00000017405 Nek8 4632401F23Rik|b2b1449Clo|jck NIMA (never in mitosis gene a)-related expressed kinase 8 protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-6 chr11 86573615 86574115 + 0.392630012299441 NA Intergenic Intergenic 10293 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-9 chr2 94051403 94051738 + 0.392630012299441 NA intron (NM_019657, intron 7 of 10) intron (NM_019657, intron 7 of 10) -40840 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441 chr10 12693931 12694499 + 0.392630012299441 NA intron (NM_011682, intron 24 of 73) intron (NM_011682, intron 24 of 73) 167520 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441 chr12 112598778 112599124 + 0.392630012299441 NA intron (NM_198411, intron 1 of 22) X7C_LINE|LINE|CR1 10167 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-20 chr5 151187060 151187402 + 0.392630012299441 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 2962 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-9 chr14 55591941 55592285 + 0.392630012299441 NA intron (NM_194346, intron 1 of 20) intron (NM_194346, intron 1 of 20) 371 NM_194346 268749 Mm.23748 NM_194346 ENSMUSG00000047098 Rnf31 AL033293|BC031509|Flj10111|HOIP|Paul|mFLJ00217 ring finger protein 31 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-15 chr4 137486469 137486884 + 0.392630012299441 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 17873 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-6 chr10 63243302 63243537 + 0.392630012299441 NA promoter-TSS (NM_026101) promoter-TSS (NM_026101) -378 NM_030114 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding unique_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-5 chr16 15992339 15992767 + 0.392630012299441 NA intron (NM_001355731, intron 7 of 18) intron (NM_001355731, intron 7 of 18) 105267 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-19 chr5 21498227 21498554 + 0.392630012299441 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -45137 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-4 chr12 3389756 3390259 + 0.392630012299441 NA intron (NM_008445, intron 4 of 7) intron (NM_008445, intron 4 of 7) 24875 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-6 chr13 112340537 112340918 + 0.392630012299441 NA intron (NM_001168403, intron 6 of 11) intron (NM_001168403, intron 6 of 11) 52209 NM_001168404 77318 Mm.159895 NM_029898 ENSMUSG00000049985 Ankrd55 C030011J08Rik ankyrin repeat domain 55 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441 chr1 132195699 132196144 + 0.392630012299441 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) -2167 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-5 chr15 60821852 60822231 + 0.392630012299441 NA promoter-TSS (NR_030696) promoter-TSS (NR_030696) -924 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-9 chr5 32140152 32140509 + 0.392630012299441 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 3858 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-12 chr4 43389765 43390216 + 0.392630012299441 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) 8008 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-25 chr7 139285587 139285853 + 0.392630012299441 NA Intergenic Intergenic 37238 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-8 chr15 25369105 25369351 + 0.392630012299441 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 44536 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-10 chr3 79904439 79904704 + 0.392630012299441 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 18641 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-9 chr18 80551029 80551353 + 0.392630012299441 NA Intergenic Intergenic -6645 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-10 chr5 77362384 77363008 + 0.392630012299441 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 45349 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-5 chr10 12803355 12803908 + 0.392630012299441 NA intron (NM_011682, intron 1 of 73) L1MC3|LINE|L1 58104 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-3 chr12 25155103 25155497 + 0.392630012299441 NA Intergenic Intergenic 26126 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-12 chr2 135526071 135526430 + 0.392630012299441 NA Intergenic Intergenic 56970 NR_015544 320684 Mm.421433 NR_015544 ENSMUSG00000085631 9630028H03Rik - RIKEN cDNA 9630028H03 gene ncRNA unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-7 chr13 113613892 113614407 + 0.392630012299441 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 4415 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-22 chr6 135070252 135070513 + 0.392630012299441 NA intron (NM_181444, intron 1 of 3) intron (NM_181444, intron 1 of 3) 4720 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-14 chr8 120489369 120489678 + 0.392630012299441 NA intron (NM_198671, intron 1 of 15) CpG-14576 657 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding unique_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441 chr2 21958781 21959255 + 0.392630012299441 NA Intergenic Intergenic -268485 NM_148413 667663 Mm.330033 NM_148413 ENSMUSG00000025716 Myo3a 9030416P08Rik myosin IIIA protein-coding unique_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-2 chr16 57418946 57419207 + 0.392630012299441 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 65799 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-8 chr17 83955340 83955629 + 0.392630012299441 NA Intergenic Intergenic -43068 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-4 chr10 128459712 128460031 + 0.392630012299441 NA intron (NM_001114097, intron 1 of 27) intron (NM_001114097, intron 1 of 27) 635 NM_001114097 68094 Mm.417338 NM_198160 ENSMUSG00000025369 Smarcc2 5930405J04Rik SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-4 chr15 6389451 6389803 + 0.392630012299441 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 2879 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-3 chr10 111619461 111619706 + 0.392630012299441 NA Intergenic Intergenic -25310 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-15 chr7 134287562 134287920 + 0.392630012299441 NA intron (NM_001081331, intron 5 of 7) intron (NM_001081331, intron 5 of 7) -62644 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak2_25_17_0.255613173012801_4.29773158794871_0.392630012299441-2 chr14 54516911 54517235 + 0.392630012299441 NA intron (NM_013768, intron 1 of 16) intron (NM_013768, intron 1 of 16) 397 NM_001313906 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-13 chr5 112324786 112325017 + 0.392630012299441 NA Intergenic Intergenic -1468 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak2_24_17_0.19942884028324_4.26963942158393_0.392630012299441-3 chr10 91187826 91188041 + 0.392630012299441 NA Intergenic Intergenic -16314 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-17 chr6 108453794 108454146 + 0.392630012299441 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -35773 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-17 chr4 141926142 141926393 + 0.392630012299441 NA intron (NM_177868, intron 18 of 31) intron (NM_177868, intron 18 of 31) -51347 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding unique_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-14 chr9 7764354 7764611 + 0.392630012299441 NA intron (NR_152989, intron 1 of 5) CpG 317 NR_152989 71929 Mm.283293 NM_133739 ENSMUSG00000050912 Tmem123 2310075C12Rik transmembrane protein 123 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-13 chr18 80707726 80707969 + 0.392630012299441 NA intron (NM_198429, intron 1 of 9) CpG 326 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-6 chr11 79639599 79640080 + 0.392630012299441 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -16676 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA unique_peak1_24_17_0.19942884028324_4.26963942158393_0.392630012299441-10 chr4 89427036 89427538 + 0.392630012299441 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -116255 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-4 chr11 95414338 95414619 + 0.392630012299441 NA intron (NM_001359107, intron 1 of 9) intron (NM_001359107, intron 1 of 9) 395 NM_001359107 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding unique_peak1_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-3 chr6 122869423 122869687 + 0.392630012299441 NA Intergenic Intergenic -5002 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441 chr1 62704110 62704416 + 0.392630012299441 NA exon (NM_010939, exon 1 of 16) exon (NM_010939, exon 1 of 16) 946 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_19_21_-0.409734675665623_4.25456428080449_0.392630012299441 chr1 178528874 178529278 + 0.392630012299441 NA promoter-TSS (NM_001161665) promoter-TSS (NM_001161665) -49 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak2_20_21_-0.339841943044673_4.28951064711496_0.392630012299441-16 chr4 136433770 136433982 + 0.392630012299441 NA intron (NM_001285484, intron 1 of 1) B1F2|SINE|Alu 9264 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak1_25_17_0.255613173012801_4.29773158794871_0.392630012299441-7 chr17 17791842 17792238 + 0.392630012299441 NA Intergenic Intergenic -38148 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-18 chr8 68306808 68307341 + 0.392630012299441 NA intron (NM_028182, intron 4 of 8) intron (NM_028182, intron 4 of 8) 30546 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak2_19_21_-0.409734675665623_4.25456428080449_0.392630012299441-3 chr1 157081742 157081980 + 0.392630012299441 NA Intergenic Intergenic 26789 NM_001305059 73435 Mm.116705 NM_028540 ENSMUSG00000026592 Tex35 1700057K13Rik testis expressed 35 protein-coding common_peak1_87_80_-0.167729579860809_6.25598521295422_0.392502671390497 chr1 127204664 127206149 + 0.392502671390497 NA 5' UTR (NM_145128, exon 1 of 18) 5' UTR (NM_145128, exon 1 of 18) 420 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_87_80_-0.167729579860809_6.25598521295422_0.392502671390497-2 chr19 34254243 34254955 + 0.392502671390497 NA intron (NM_007392, intron 1 of 8) intron (NM_007392, intron 1 of 8) 774 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding common_peak2_87_80_-0.167729579860809_6.25598521295422_0.392502671390497-3 chr3 121721114 121722260 + 0.392502671390497 NA Intergenic Intergenic -1850 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_97_72_0.136478604912793_6.25806386133641_0.392502671390497 chr15 73245942 73246639 + 0.392502671390497 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 8592 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak1_97_72_0.136478604912793_6.25806386133641_0.392502671390497 chr14 76519312 76520557 + 0.392502671390497 NA non-coding (NR_045660, exon 2 of 4) non-coding (NR_045660, exon 2 of 4) 921 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak2_87_80_-0.167729579860809_6.25598521295422_0.392502671390497 chr11 8588925 8589446 + 0.392502671390497 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 75350 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_87_80_-0.167729579860809_6.25598521295422_0.392502671390497-4 chr5 73255498 73256356 + 0.392502671390497 NA intron (NM_028194, intron 1 of 62) CpG 691 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_201_177_-0.113290511282229_7.41908817532528_0.392479182881626 chr19 6140182 6141774 + 0.392479182881626 NA intron (NM_019722, intron 1 of 4) CpG 159 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak2_319_275_-0.087047432099471_8.06500074072843_0.392365570271642 chr19 60789841 60791395 + 0.392365570271642 NA promoter-TSS (NM_010123) promoter-TSS (NM_010123) 75 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding common_peak1_139_124_-0.128538251262771_6.9015151590307_0.392295196716639 chr19 17262778 17264301 + 0.392295196716639 NA Intergenic Intergenic 75966 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_123_92_0.124235748871507_6.60127668554378_0.392197388149971 chr16 84835089 84835679 + 0.392197388149971 NA promoter-TSS (NM_001302216) promoter-TSS (NM_001302216) 241 NM_016755 11957 Mm.353 NM_016755 ENSMUSG00000022890 Atp5j CF6 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein-coding common_peak1_75_55_0.154753552914299_5.88473169851475_0.392026335124032-3 chr9 67633804 67634817 + 0.392026335124032 NA Intergenic Intergenic -74607 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding common_peak1_75_55_0.154753552914299_5.88473169851475_0.392026335124032 chr11 22858897 22859625 + 0.392026335124032 NA intron (NM_001169114, intron 1 of 1) CpG 474 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_75_55_0.154753552914299_5.88473169851475_0.392026335124032 chr11 83878111 83878661 + 0.392026335124032 NA intron (NM_009330, intron 4 of 8) intron (NM_009330, intron 4 of 8) 25426 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_74_55_0.135779542322159_5.87524469321868_0.392026335124032 chr11 31550763 31551290 + 0.392026335124032 NA Intergenic Intergenic 120836 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_75_55_0.154753552914299_5.88473169851475_0.392026335124032-2 chr8 72474427 72475109 + 0.392026335124032 NA exon (NM_138585, exon 2 of 18) exon (NM_138585, exon 2 of 18) 465 NM_001359024 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak1_74_55_0.135779542322159_5.87524469321868_0.392026335124032-3 chr8 70712608 70713191 + 0.392026335124032 NA Intergenic Intergenic -5644 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding common_peak1_74_55_0.135779542322159_5.87524469321868_0.392026335124032-2 chr2 26118224 26119170 + 0.392026335124032 NA intron (NM_026495, intron 1 of 5) intron (NM_026495, intron 1 of 5) 4114 NM_026495 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding common_peak1_75_55_0.154753552914299_5.88473169851475_0.392026335124032-2 chr12 80257333 80258152 + 0.392026335124032 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 2629 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_66_62_-0.195726905859529_5.87941647057015_0.39202633512402-3 chr15 81858424 81859192 + 0.39202633512402 NA promoter-TSS (NM_020507) promoter-TSS (NM_020507) -482 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak2_66_62_-0.195726905859529_5.87941647057015_0.39202633512402-2 chr14 32513505 32514078 + 0.39202633512402 NA intron (NM_001081221, intron 1 of 20) CpG 270 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding common_peak1_66_62_-0.195726905859529_5.87941647057015_0.39202633512402 chr17 6782548 6783598 + 0.39202633512402 NA promoter-TSS (NM_009510) promoter-TSS (NM_009510) -293 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_66_62_-0.195726905859529_5.87941647057015_0.39202633512402 chr10 25789829 25790345 + 0.39202633512402 NA intron (NR_045349, intron 2 of 4) intron (NR_045349, intron 2 of 4) 47350 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA common_peak2_66_62_-0.195726905859529_5.87941647057015_0.39202633512402-4 chr17 7945347 7946374 + 0.39202633512402 NA exon (NM_025789, exon 1 of 8) exon (NM_025789, exon 1 of 8) 246 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak1_66_62_-0.195726905859529_5.87941647057015_0.39202633512402-3 chr8 95012957 95013615 + 0.39202633512402 NA 3' UTR (NM_001198894, exon 14 of 14) 3' UTR (NM_001198894, exon 14 of 14) -4406 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak2_66_62_-0.195726905859529_5.87941647057015_0.39202633512402-5 chr18 76929616 76930645 + 0.39202633512402 NA exon (NM_025409, exon 1 of 3) exon (NM_025409, exon 1 of 3) 103 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding common_peak1_66_62_-0.195726905859529_5.87941647057015_0.39202633512402-2 chr3 104359493 104360370 + 0.39202633512402 NA Intergenic Intergenic -139525 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak2_55_40_0.167092109600596_5.44109805941838_0.392002726290462-4 chr3 96171815 96172340 + 0.392002726290462 NA promoter-TSS (NM_153053) promoter-TSS (NM_153053) -429 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak1_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-5 chr8 116992927 116993475 + 0.392002726290462 NA intron (NM_026572, intron 1 of 4) CpG 248 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak1_48_46_-0.221230708311583_5.44397349752185_0.392002726290462-2 chr5 77373326 77373820 + 0.392002726290462 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 34472 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_55_40_0.167092109600596_5.44109805941838_0.392002726290462 chr1 192070204 192070759 + 0.392002726290462 NA exon (NM_011633, exon 2 of 10) exon (NM_011633, exon 2 of 10) 22118 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-3 chr16 17927437 17928089 + 0.392002726290462 NA intron (NM_153150, intron 1 of 8) CpG-5572 456 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_48_46_-0.221230708311583_5.44397349752185_0.392002726290462-3 chr18 61092741 61093392 + 0.392002726290462 NA Intergenic Intergenic -12506 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak2_55_40_0.167092109600596_5.44109805941838_0.392002726290462-2 chr11 99556708 99557340 + 0.392002726290462 NA promoter-TSS (NM_025720) promoter-TSS (NM_025720) -171 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding common_peak1_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-3 chr7 110164384 110164844 + 0.392002726290462 NA Intergenic Intergenic 42555 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak2_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-2 chr13 14629833 14630766 + 0.392002726290462 NA promoter-TSS (NM_001104646) promoter-TSS (NM_001104646) 41 NM_134067 105351 Mm.41450 NM_134067 ENSMUSG00000039182 AW209491 - expressed sequence AW209491 protein-coding common_peak1_55_40_0.167092109600596_5.44109805941838_0.392002726290462-3 chr13 6416368 6417129 + 0.392002726290462 NA Intergenic MTEb|LTR|ERVL-MaLR -131409 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak2_48_46_-0.221230708311583_5.44397349752185_0.392002726290462-4 chr3 104781167 104781895 + 0.392002726290462 NA intron (NM_027982, intron 1 of 9) CpG 475 NM_027982 71887 Mm.379204 NM_027982 ENSMUSG00000002228 Ppm1j 2310008J22Rik|PP2Czeta|Ppp2cz protein phosphatase 1J protein-coding common_peak1_55_40_0.167092109600596_5.44109805941838_0.392002726290462 chr10 108433731 108434439 + 0.392002726290462 NA Intergenic Intergenic 101896 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-5 chr6 100670593 100671147 + 0.392002726290462 NA intron (NM_181590, intron 1 of 10) CpG 287 NM_181590 72171 Mm.256022 NM_181590 ENSMUSG00000035378 Shq1 2810403P18Rik|Grim-1 SHQ1 homolog (S. cerevisiae) protein-coding common_peak1_55_40_0.167092109600596_5.44109805941838_0.392002726290462-2 chr11 54522874 54523414 + 0.392002726290462 NA intron (NM_001252494, intron 1 of 28) CpG 299 NM_001252496 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_48_46_-0.221230708311583_5.44397349752185_0.392002726290462 chr17 46932112 46932769 + 0.392002726290462 NA intron (NM_146078, intron 46 of 46) intron (NM_146078, intron 46 of 46) 21955 NM_008938 19133 Mm.291370 NM_008938 ENSMUSG00000023978 Prph2 AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds peripherin 2 protein-coding common_peak1_55_40_0.167092109600596_5.44109805941838_0.392002726290462-5 chr3 95696752 95697426 + 0.392002726290462 NA Intergenic (TCTA)n|Simple_repeat|Simple_repeat -9172 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_48_46_-0.221230708311583_5.44397349752185_0.392002726290462-3 chr7 34654837 34655585 + 0.392002726290462 NA promoter-TSS (NM_001360820) promoter-TSS (NM_001360820) 298 NM_001360818 233107 Mm.76761 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak1_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-2 chr5 92698366 92698882 + 0.392002726290462 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 15189 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-4 chr4 152039369 152040131 + 0.392002726290462 NA exon (NM_028727, exon 1 of 12) exon (NM_028727, exon 1 of 12) 429 NM_028727 74035 Mm.275803 NM_028727 ENSMUSG00000028948 Nol9 4632412I24Rik|6030462G04Rik|AI449622|AW490720 nucleolar protein 9 protein-coding common_peak2_48_46_-0.221230708311583_5.44397349752185_0.392002726290462-2 chr18 57878647 57879374 + 0.392002726290462 NA exon (NM_009194, exon 1 of 27) exon (NM_009194, exon 1 of 27) 332 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak1_48_46_-0.221230708311583_5.44397349752185_0.392002726290462 chr15 83166099 83166707 + 0.392002726290462 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 5805 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak2_55_40_0.167092109600596_5.44109805941838_0.392002726290462-3 chr3 88335742 88336508 + 0.392002726290462 NA promoter-TSS (NM_178246) promoter-TSS (NM_178246) -135 NM_178246 229512 Mm.439830 NM_173188 ENSMUSG00000001415 Smg5 BC024683|mKIAA1089 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_47_46_-0.250768184805632_5.42920475927482_0.392002726290462 chr1 170885002 170885396 + 0.392002726290462 NA exon (NM_001356485, exon 1 of 5) exon (NM_001356485, exon 1 of 5) 341 NR_151476 80915 Mm.34365 NM_023173 ENSMUSG00000026659 Dusp12 1190004O14Rik|AA027408|AW049275|ESTM36|LMW-DSP4|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 protein-coding common_peak1_47_46_-0.250768184805632_5.42920475927482_0.392002726290462-4 chr8 25305276 25305780 + 0.392002726290462 NA intron (NR_040352, intron 2 of 2) intron (NR_040352, intron 2 of 2) 742 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_47_46_-0.250768184805632_5.42920475927482_0.392002726290462 chr3 115888250 115888732 + 0.392002726290462 NA promoter-TSS (NR_027894) promoter-TSS (NR_027894) 308 NM_027193 69740 Mm.5915 NM_027193 ENSMUSG00000033554 Dph5 2410012M04Rik|AU045680|C80186 diphthamide biosynthesis 5 protein-coding common_peak1_55_40_0.167092109600596_5.44109805941838_0.392002726290462-4 chr19 41993985 41994508 + 0.392002726290462 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 12483 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak1_55_40_0.167092109600596_5.44109805941838_0.392002726290462-6 chr8 82863695 82864504 + 0.392002726290462 NA exon (NM_177378, exon 1 of 7) exon (NM_177378, exon 1 of 7) 743 NM_177378 330812 Mm.491438 NM_177378 ENSMUSG00000047747 Rnf150 A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214 ring finger protein 150 protein-coding common_peak2_55_40_0.167092109600596_5.44109805941838_0.392002726290462-5 chr9 86695101 86695708 + 0.392002726290462 NA promoter-TSS (NR_045835) promoter-TSS (NR_045835) -38 NR_045835 319556 Mm.386894 NR_045835 ENSMUSG00000087466 A330041J22Rik - RIKEN cDNA A330041J22 gene ncRNA common_peak2_152_115_0.106466087090546_6.91121403867284_0.39153421090643 chr9 110407222 110408170 + 0.39153421090643 NA intron (NM_001081043, intron 1 of 24) intron (NM_001081043, intron 1 of 24) 514 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak1_341_263_0.0723305804951124_8.08055940960601_0.391352345255328 chr4 117123312 117126139 + 0.391352345255328 NA non-coding (NR_024078, exon 2 of 7) non-coding (NR_024078, exon 2 of 7) 1000 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak2_184_140_0.0969563282660379_7.18802951653181_0.391342975205301 chr19 43659473 43661010 + 0.391342975205301 NA Intergenic L3|LINE|CR1 14640 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_98_73_0.131393241423019_6.27514998634046_0.391313637065645-2 chr19 40254161 40254631 + 0.391313637065645 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 17220 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_88_81_-0.169244778218157_6.27292961550901_0.391313637065645 chr3 88297178 88298233 + 0.391313637065645 NA promoter-TSS (NM_029801) promoter-TSS (NM_029801) 570 NM_009836 12462 Mm.256034 NM_009836 ENSMUSG00000001416 Cct3 AL024092|Cctg|Tcp1-rs3|TriC-P5 chaperonin containing Tcp1, subunit 3 (gamma) protein-coding common_peak2_98_73_0.131393241423019_6.27514998634046_0.391313637065645-3 chr2 144269734 144271091 + 0.391313637065645 NA promoter-TSS (NM_001289630) promoter-TSS (NM_001289630) 160 NM_024225 69178 Mm.273379 NM_024225 ENSMUSG00000027423 Snx5 0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e sorting nexin 5 protein-coding common_peak2_98_73_0.131393241423019_6.27514998634046_0.391313637065645 chr11 102184500 102185671 + 0.391313637065645 NA exon (NM_172947, exon 1 of 5) exon (NM_172947, exon 1 of 5) 171 NM_172947 268490 Mm.259079 NM_172947 ENSMUSG00000020922 Lsm12 1110032E16Rik|1110059P07|2600001B17Rik LSM12 homolog protein-coding common_peak2_124_93_0.120311929655306_6.61474481650529_0.391261669680795-2 chr19 47885230 47886526 + 0.391261669680795 NA intron (NM_030051, intron 8 of 8) intron (NM_030051, intron 8 of 8) 20084 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak2_124_93_0.120311929655306_6.61474481650529_0.391261669680795 chr11 116030353 116031290 + 0.391261669680795 NA intron (NM_001286006, intron 1 of 15) intron (NM_001286006, intron 1 of 15) 505 NM_172569 217331 Mm.297706 NM_172569 ENSMUSG00000020770 Unk B230379M23Rik|Unkh|Zc3h5|Zc3hdc5|mKIAA1753 unkempt family zinc finger protein-coding common_peak1_124_93_0.120311929655306_6.61474481650529_0.391261669680795 chr12 16893379 16894748 + 0.391261669680795 NA promoter-TSS (NM_009072) promoter-TSS (NM_009072) -915 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak1_124_93_0.120311929655306_6.61474481650529_0.391261669680795-3 chr8 11554796 11555751 + 0.391261669680795 NA promoter-TSS (NM_001302458) promoter-TSS (NM_001302458) -489 NM_001302458 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_124_93_0.120311929655306_6.61474481650529_0.391261669680795-2 chr13 34875147 34876414 + 0.391261669680795 NA intron (NM_013830, intron 1 of 14) CpG 286 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding common_peak1_153_116_0.10341475301454_6.92207209609067_0.39078581421855 chr7 79285710 79287207 + 0.39078581421855 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 13192 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_141_126_-0.131118924638677_6.92312522445283_0.39078581421855 chr7 128460429 128461615 + 0.39078581421855 NA intron (NM_001347641, intron 1 of 12) CpG 491 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding common_peak1_141_126_-0.131118924638677_6.92312522445283_0.39078581421855 chr4 132210830 132212090 + 0.39078581421855 NA intron (NM_145393, intron 1 of 4) CpG-10406 796 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding common_peak1_141_126_-0.131118924638677_6.92312522445283_0.39078581421855-2 chr7 98655434 98656738 + 0.39078581421855 NA intron (NM_172280, intron 1 of 19) CpG 483 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak1_186_141_0.10216411663779_7.20082917782358_0.390726213470324 chr2 137116870 137118175 + 0.390726213470324 NA Intergenic CpG-8595 -1002 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_185_141_0.0944830427023096_7.19698864085584_0.390726213470324 chr7 133793596 133795183 + 0.390726213470324 NA intron (NM_025850, intron 1 of 10) intron (NM_025850, intron 1 of 10) -11604 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_76_56_0.147944438006448_5.90686223316797_0.390495201889466 chr1 88007854 88008642 + 0.390495201889466 NA intron (NM_001033291, intron 1 of 27) CpG 303 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding common_peak1_67_63_-0.197224122236793_5.9013879388816_0.390495201889466 chr11 59948227 59948937 + 0.390495201889466 NA promoter-TSS (NR_045273) promoter-TSS (NR_045273) 368 NM_138675 192191 Mm.125288 NM_138675 ENSMUSG00000061650 Med9 BC019367|Med25 mediator complex subunit 9 protein-coding common_peak2_67_63_-0.197224122236793_5.9013879388816_0.390495201889466-2 chr19 53902631 53903174 + 0.390495201889466 NA promoter-TSS (NM_001168492) promoter-TSS (NM_001168492) -449 NM_001168492 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_67_63_-0.197224122236793_5.9013879388816_0.390495201889466-2 chr9 102734292 102735489 + 0.390495201889466 NA Intergenic Intergenic -4758 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_76_56_0.147944438006448_5.90686223316797_0.390495201889466-2 chr13 112463322 112463987 + 0.390495201889466 NA promoter-TSS (NM_010560) promoter-TSS (NM_010560) -416 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_67_63_-0.197224122236793_5.9013879388816_0.390495201889466 chr1 178733087 178733805 + 0.390495201889466 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 204321 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak1_76_56_0.147944438006448_5.90686223316797_0.390495201889466-3 chr9 50845940 50847035 + 0.390495201889466 NA Intergenic Intergenic -10437 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_125_94_0.116459710342643_6.62808546350227_0.390344970638848-2 chr3 98415772 98417398 + 0.390344970638848 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 34104 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_125_94_0.116459710342643_6.62808546350227_0.390344970638848 chr19 22916021 22917150 + 0.390344970638848 NA intron (NM_001035239, intron 19 of 24) intron (NM_001035239, intron 19 of 24) 165980 NR_029591 387200 NR_029591 ENSMUSG00000065507 Mir204 Mirn204|mir-204|mmu-mir-204 microRNA 204 ncRNA common_peak2_114_103_-0.144984497164203_6.62794746955899_0.390344970638823 chr10 24480991 24482785 + 0.390344970638823 NA Intergenic Intergenic -113554 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_89_82_-0.170726263493585_6.28967629960013_0.39015513150604-2 chr17 46202835 46203633 + 0.39015513150604 NA promoter-TSS (NM_030715) promoter-TSS (NM_030715) 379 NM_028198 72322 Mm.275039 NM_028198 ENSMUSG00000067150 Xpo5 2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291 exportin 5 protein-coding common_peak2_99_74_0.126425192083183_6.29203128653747_0.39015513150604 chr12 85959036 85959826 + 0.39015513150604 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 119610 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_89_82_-0.170726263493585_6.28967629960013_0.39015513150604 chr15 66875882 66876915 + 0.39015513150604 NA Intergenic Intergenic -14995 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-12 chr8 11261841 11262270 + 0.390124689062469 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -50750 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-13 chr8 54553248 54553954 + 0.390124689062469 NA intron (NM_029569, intron 1 of 6) intron (NM_029569, intron 1 of 6) 3270 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-7 chr2 32845952 32846485 + 0.390124689062469 NA intron (NM_001113569, intron 1 of 19) CpG 1014 NM_009295 20910 Mm.278865 NM_009295 ENSMUSG00000026797 Stxbp1 AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1 syntaxin binding protein 1 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-7 chr5 111228808 111229379 + 0.390124689062469 NA intron (NM_001267622, intron 8 of 22) intron (NM_001267622, intron 8 of 22) -101604 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-4 chr11 101465392 101466014 + 0.390124689062469 NA intron (NM_012037, intron 1 of 5) CpG 496 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-6 chr18 68119288 68119755 + 0.390124689062469 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -108425 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-10 chr6 43264055 43264838 + 0.390124689062469 NA Intergenic Intergenic -1198 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-15 chrX 142901813 142902613 + 0.390124689062469 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 64515 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469 chr1 52251460 52252030 + 0.390124689062469 NA Intergenic Intergenic -18513 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-9 chr8 24419148 24419438 + 0.390124689062469 NA Intergenic L2|LINE|L2 19653 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-8 chr4 121016628 121017197 + 0.390124689062469 NA 5' UTR (NM_133716, exon 1 of 10) 5' UTR (NM_133716, exon 1 of 10) 335 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-4 chr18 26368317 26368580 + 0.390124689062469 NA Intergenic Intergenic -614291 NM_001362334 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-6 chr4 141558901 141559227 + 0.390124689062469 NA Intergenic Intergenic 12902 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-11 chr7 90341585 90342033 + 0.390124689062469 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 39454 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-2 chr11 48817846 48818264 + 0.390124689062469 NA promoter-TSS (NM_145377) promoter-TSS (NM_145377) -664 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469 chr1 125678498 125679252 + 0.390124689062469 NA intron (NM_027677, intron 1 of 1) (GGGA)n|Simple_repeat|Simple_repeat 1879 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-3 chr11 94211466 94212128 + 0.390124689062469 NA intron (NM_009427, intron 1 of 1) CpG-2446 343 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-3 chr16 4593891 4594314 + 0.390124689062469 NA promoter-TSS (NM_031184) promoter-TSS (NM_031184) -611 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-8 chr5 135689246 135689713 + 0.390124689062469 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 334 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-9 chr5 31633862 31634544 + 0.390124689062469 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 20252 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-5 chr2 174415871 174416213 + 0.390124689062469 NA intron (NM_020580, intron 1 of 14) CpG 238 NM_020580 57314 Mm.271709 NM_020580 ENSMUSG00000016253 Nelfcd 2410003I03Rik|C77797|Th1|Th1l negative elongation factor complex member C/D, Th1l protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-5 chr16 30963953 30964391 + 0.390124689062469 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 117260 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak2_39_28_0.184660968270858_4.950311479263_0.390124689062469-10 chr9 102784627 102784929 + 0.390124689062469 NA Intergenic Intergenic 45130 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-14 chr8 122462040 122462693 + 0.390124689062469 NA Intergenic Intergenic -1674 NM_013914 30927 Mm.103673 NM_013914 ENSMUSG00000006587 Snai3 AI643946|Smuc|Zfp293 snail family zinc finger 3 protein-coding common_peak1_39_28_0.184660968270858_4.950311479263_0.390124689062469-2 chr10 96821885 96822372 + 0.390124689062469 NA Intergenic Intergenic 205127 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_33_33_-0.277631983913888_4.94864684929339_0.390124689062463-4 chr2 69400625 69401190 + 0.390124689062463 NA intron (NM_175512, intron 4 of 4) MER5A|DNA|hAT-Charlie 20445 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak2_33_33_-0.277631983913888_4.94864684929339_0.390124689062463 chr11 76179465 76180019 + 0.390124689062463 NA promoter-TSS (NM_026664) promoter-TSS (NM_026664) -112 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak2_33_33_-0.277631983913888_4.94864684929339_0.390124689062463-2 chr12 26414628 26415213 + 0.390124689062463 NA promoter-TSS (NR_105856) promoter-TSS (NR_105856) 90 NR_105856 102466676 NR_105856 ENSMUSG00000098771 Mir6538 Gm27439|mmu-mir-6538 microRNA 6538 ncRNA common_peak2_33_33_-0.277631983913888_4.94864684929339_0.390124689062463-5 chr3 102478154 102478769 + 0.390124689062463 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 8542 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_33_33_-0.277631983913888_4.94864684929339_0.390124689062463 chr11 12410774 12411155 + 0.390124689062463 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) 1176 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_33_33_-0.277631983913888_4.94864684929339_0.390124689062463-3 chr13 42049485 42050022 + 0.390124689062463 NA Intergenic CpG -2268 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak1_33_33_-0.277631983913888_4.94864684929339_0.390124689062463-2 chr9 78615625 78616157 + 0.390124689062463 NA exon (NM_153098, exon 1 of 33) exon (NM_153098, exon 1 of 33) 345 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding common_peak1_187_142_0.0996800073771773_7.20971134046698_0.39011782046696 chr6 120363530 120365442 + 0.39011782046696 NA promoter-TSS (NR_045558) promoter-TSS (NR_045558) -117 NR_045558 67200 Mm.45767 NM_026028 ENSMUSG00000030177 Ccdc77 2400002C23Rik|2700091N06Rik|AV168274 coiled-coil domain containing 77 protein-coding common_peak1_154_117_0.100408409371575_6.93284725404763_0.390049696732756 chr4 109475549 109477187 + 0.390049696732756 NA 5' UTR (NM_013876, exon 1 of 3) 5' UTR (NM_013876, exon 1 of 3) 137 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding common_peak2_56_41_0.157681633993841_5.47115823977568_0.389931913367351 chr3 96696861 96697516 + 0.389931913367351 NA exon (NM_018812, exon 1 of 15) exon (NM_018812, exon 1 of 15) 112 NM_018812 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak1_56_41_0.157681633993841_5.47115823977568_0.389931913367351-2 chr3 146521151 146521776 + 0.389931913367351 NA promoter-TSS (NM_027332) promoter-TSS (NM_027332) -40 NM_027371 70285 Mm.28128 NM_027332 ENSMUSG00000028187 Rpf1 2210420E24Rik|2310066N05Rik|Bxdc5 ribosome production factor 1 homolog protein-coding common_peak2_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-4 chr14 79481203 79481465 + 0.389931913367351 NA promoter-TSS (NM_018765) promoter-TSS (NM_018765) -66 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding common_peak1_56_41_0.157681633993841_5.47115823977568_0.389931913367351-3 chr8 35599223 35599845 + 0.389931913367351 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -10514 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-6 chr7 84328405 84329125 + 0.389931913367351 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 81273 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-3 chr6 134927829 134928567 + 0.389931913367351 NA promoter-TSS (NR_037955) promoter-TSS (NR_037955) -894 NR_037956 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak1_49_47_-0.222663638568847_5.47363068143673_0.389931913367351 chr11 31503127 31503489 + 0.389931913367351 NA Intergenic Intergenic -133247 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_56_41_0.157681633993841_5.47115823977568_0.389931913367351-4 chr9 21752074 21752617 + 0.389931913367351 NA Intergenic Intergenic 7958 NR_151672 67629 Mm.295642 NM_026282 ENSMUSG00000074476 Spc24 2410030K01Rik|AV109292|Spbc24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein-coding common_peak2_56_41_0.157681633993841_5.47115823977568_0.389931913367351-3 chr5 92137988 92138570 + 0.389931913367351 NA promoter-TSS (NM_001359195) promoter-TSS (NM_001359195) 341 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding common_peak1_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-2 chr15 10793439 10793922 + 0.389931913367351 NA Intergenic Intergenic -35371 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak2_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-3 chr11 31503156 31503529 + 0.389931913367351 NA Intergenic Intergenic -133281 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_56_41_0.157681633993841_5.47115823977568_0.389931913367351-2 chr4 149998851 149999316 + 0.389931913367351 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 4153 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-2 chr11 5835459 5836342 + 0.389931913367351 NA intron (NM_017401, intron 2 of 10) intron (NM_017401, intron 2 of 10) 2116 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak2_49_47_-0.222663638568847_5.47363068143673_0.389931913367351-5 chr15 99820333 99820994 + 0.389931913367351 NA promoter-TSS (NM_023063) promoter-TSS (NM_023063) -514 NM_023063 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_56_41_0.157681633993841_5.47115823977568_0.389931913367351 chr15 37791348 37791933 + 0.389931913367351 NA intron (NM_001359844, intron 1 of 7) CpG 360 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_49_47_-0.222663638568847_5.47363068143673_0.389931913367351 chr1 171150122 171150548 + 0.389931913367351 NA promoter-TSS (NM_008623) promoter-TSS (NM_008623) 268 NM_025321 66052 Mm.198138 NM_025321 ENSMUSG00000058076 Sdhc 0610010E03Rik|AI316496|AU019277 succinate dehydrogenase complex, subunit C, integral membrane protein protein-coding common_peak2_223_170_0.092681640186294_7.46419333497905_0.389880172673399 chr19 8774089 8775379 + 0.389880172673399 NA promoter-TSS (NR_028418) promoter-TSS (NR_028418) 249 NR_015538 100039957 Mm.220886 NR_015538 Gm2518 D630022E15Rik interferon induced transmembrane protein 2 pseudogene pseudo common_peak2_188_143_0.097225919458733_7.21853796117168_0.38951762697347 chr19 47854213 47855412 + 0.38951762697347 NA promoter-TSS (NM_010362) promoter-TSS (NM_010362) -161 NM_010362 14873 Mm.378931 NM_010362 ENSMUSG00000025068 Gsto1 AA407097|AI194287|AU018802|Gsto-1|Gstx|Spg-r|p28 glutathione S-transferase omega 1 protein-coding common_peak1_126_95_0.112677120852759_6.64130106114754_0.389446716778348 chr3 89164694 89165743 + 0.389446716778348 NA intron (NM_001310017, intron 1 of 18) CpG 423 NM_001163432 12748 Mm.288098 NM_007712 ENSMUSG00000068917 Clk2 AU041688 CDC-like kinase 2 protein-coding common_peak1_126_95_0.112677120852759_6.64130106114754_0.389446716778348-2 chr8 47712841 47713957 + 0.389446716778348 NA intron (NM_001359133, intron 1 of 2) CpG 532 NM_001359133 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak2_247_215_-0.0985479217571745_7.70561354128488_0.38904877356038 chr11 59345180 59347068 + 0.38904877356038 NA Intergenic Intergenic 29529 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_91_83_-0.15651910055575_6.31405787250089_0.389025993365906-3 chr8 4275298 4276201 + 0.389025993365906 NA intron (NM_011592, intron 1 of 12) CpG 156 NM_011592 21856 Mm.195249 NM_011592 ENSMUSG00000002949 Timm44 0710005E20Rik|D8Ertd118e|Mimt44|Tim44 translocase of inner mitochondrial membrane 44 protein-coding common_peak2_91_83_-0.15651910055575_6.31405787250089_0.389025993365906-2 chr4 155601425 155602348 + 0.389025993365906 NA intron (NM_177186, intron 1 of 8) CpG 470 NM_177186 320541 Mm.306018 NM_177186 ENSMUSG00000042202 Slc35e2 A530082C11Rik|AI957035 solute carrier family 35, member E2 protein-coding common_peak1_101_75_0.135683966547076_6.31576949671712_0.389025993365906 chr4 135872852 135873843 + 0.389025993365906 NA intron (NM_026383, intron 1 of 2) intron (NM_026383, intron 1 of 2) 499 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak2_100_75_0.121570385813828_6.3087127063505_0.389025993365906 chr13 41001014 41001682 + 0.389025993365906 NA promoter-TSS (NR_155347) promoter-TSS (NR_155347) -202 NR_155347 102633880 Mm.314757 NR_155347 A730081D07Rik - RIKEN cDNA A730081D07 gene ncRNA common_peak1_100_75_0.121570385813828_6.3087127063505_0.389025993365906-3 chr4 114405816 114407314 + 0.389025993365906 NA promoter-TSS (NM_001085549) promoter-TSS (NM_001085549) -159 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak1_100_75_0.121570385813828_6.3087127063505_0.389025993365906-2 chr19 6241664 6242371 + 0.389025993365906 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 349 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding common_peak2_90_83_-0.172175178322762_6.30622983361738_0.389025993365906 chr7 110787036 110788010 + 0.389025993365906 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 14919 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_91_83_-0.15651910055575_6.31405787250089_0.389025993365906 chr17 34024377 34025294 + 0.389025993365906 NA promoter-TSS (NM_009066) promoter-TSS (NM_009066) -155 NM_009066 19763 Mm.20343 NM_009066 ENSMUSG00000024325 Ring1 Ring1A ring finger protein 1 protein-coding common_peak1_100_75_0.121570385813828_6.3087127063505_0.389025993365906 chr14 14012297 14013341 + 0.389025993365906 NA intron (NM_139227, intron 1 of 11) CpG 328 NM_139227 246103 Mm.133625 NM_139227 ENSMUSG00000021738 Atxn7 A430107N12Rik|AI627028|Sca7|ataxin-7 ataxin 7 protein-coding common_peak1_91_83_-0.15651910055575_6.31405787250089_0.389025993365906 chr8 4275301 4276205 + 0.389025993365906 NA intron (NM_011592, intron 1 of 12) CpG 152 NM_011592 21856 Mm.195249 NM_011592 ENSMUSG00000002949 Timm44 0710005E20Rik|D8Ertd118e|Mimt44|Tim44 translocase of inner mitochondrial membrane 44 protein-coding common_peak1_90_83_-0.172175178322762_6.30622983361738_0.389025993365906 chr3 90292314 90292889 + 0.389025993365906 NA Intergenic Intergenic 22452 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak2_100_75_0.121570385813828_6.3087127063505_0.389025993365906-2 chr15 89196125 89196834 + 0.389025993365906 NA promoter-TSS (NM_027081) promoter-TSS (NM_027081) -5 NM_027081 69440 Mm.482128 NM_027081 ENSMUSG00000015377 Dennd6b 1700027J05Rik|AI414881|Fam116b DENN/MADD domain containing 6B protein-coding common_peak1_69_64_-0.178066800055896_5.93333441300051_0.389014771016025 chr5 100605714 100606862 + 0.389014771016025 NA Intergenic Intergenic -34083 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_68_64_-0.198678909004745_5.92302835852608_0.389014771016025-2 chr4 152259726 152260504 + 0.389014771016025 NA intron (NM_133348, intron 7 of 8) intron (NM_133348, intron 7 of 8) -14247 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding common_peak2_69_64_-0.178066800055896_5.93333441300051_0.389014771016025-2 chr4 127077056 127077964 + 0.389014771016025 NA non-coding (NR_104366, exon 1 of 16) non-coding (NR_104366, exon 1 of 16) 127 NM_001285887 100177 Mm.276096 NM_177462 ENSMUSG00000042408 Zmym6 9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258 zinc finger, MYM-type 6 protein-coding common_peak2_69_64_-0.178066800055896_5.93333441300051_0.389014771016025 chr19 43916999 43917740 + 0.389014771016025 NA intron (NM_028029, intron 1 of 15) intron (NM_028029, intron 1 of 15) 22829 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak2_68_64_-0.198678909004745_5.92302835852608_0.389014771016025 chr18 5334143 5334811 + 0.389014771016025 NA promoter-TSS (NM_178722) promoter-TSS (NM_178722) -38 NM_178722 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding common_peak2_69_64_-0.178066800055896_5.93333441300051_0.389014771016025-3 chr7 123097143 123097970 + 0.389014771016025 NA Intergenic Intergenic -26329 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_68_64_-0.198678909004745_5.92302835852608_0.389014771016025 chr11 8443042 8443900 + 0.389014771016025 NA intron (NM_001083587, intron 27 of 30) intron (NM_001083587, intron 27 of 30) 221064 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_77_57_0.141337801981752_5.92864989611845_0.389014771016012-2 chr2 167575162 167575691 + 0.389014771016012 NA Intergenic Intergenic 37231 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_77_57_0.141337801981752_5.92864989611845_0.389014771016012 chr12 70968333 70969135 + 0.389014771016012 NA Intergenic Intergenic -5889 NM_001310595 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_306_235_0.0794228481528174_7.92235447343825_0.388977921831472 chr9 44603820 44605916 + 0.388977921831472 NA promoter-TSS (NM_181324) promoter-TSS (NM_181324) -24 NM_001110826 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak1_210_184_-0.106494506357675_7.47813420733747_0.388881475550831 chr5 137077282 137079874 + 0.388881475550831 NA Intergenic RSINE1|SINE|B4 -6306 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_157_119_0.103622091093514_6.95870164115528_0.388613109743914 chr19 28560482 28561990 + 0.388613109743914 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -116988 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_128_96_0.120110310676515_6.65996799752538_0.388566356748065 chr12 111712402 111713722 + 0.388566356748065 NA promoter-TSS (NM_026511) promoter-TSS (NM_026511) -109 NM_001324482 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak2_128_96_0.120110310676515_6.65996799752538_0.388566356748065-4 chr9 66946171 66947327 + 0.388566356748065 NA intron (NM_001361106, intron 1 of 3) intron (NM_001361106, intron 1 of 3) 336 NM_001361106 67941 Mm.30120 NM_026467 ENSMUSG00000036781 Rps27l 1810034D23Rik ribosomal protein S27-like protein-coding common_peak2_128_96_0.120110310676515_6.65996799752538_0.388566356748065-2 chr19 22916005 22917176 + 0.388566356748065 NA intron (NM_001035239, intron 19 of 24) intron (NM_001035239, intron 19 of 24) 165985 NR_029591 387200 NR_029591 ENSMUSG00000065507 Mir204 Mirn204|mir-204|mmu-mir-204 microRNA 204 ncRNA common_peak2_128_96_0.120110310676515_6.65996799752538_0.388566356748065-3 chr7 142434461 142435935 + 0.388566356748065 NA intron (NM_001285858, intron 1 of 8) intron (NM_001285858, intron 1 of 8) 221 NM_018802 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding common_peak1_128_96_0.120110310676515_6.65996799752538_0.388566356748065 chr14 76776045 76777310 + 0.388566356748065 NA Intergenic Intergenic 16546 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_116_105_-0.147766055226421_6.65403742694999_0.38856635674804 chr11 101253087 101254414 + 0.38856635674804 NA promoter-TSS (NM_001284414) promoter-TSS (NM_001284414) 43 NM_026776 28084 Mm.301020 NM_026776 ENSMUSG00000078656 Vps25 1110020N13Rik|AW107467|D11Wsu68e vacuolar protein sorting 25 protein-coding common_peak2_117_105_-0.135574348813764_6.66013328015632_0.38856635674804 chr11 78245194 78246053 + 0.38856635674804 NA promoter-TSS (NM_009297) promoter-TSS (NM_009297) 80 NM_009297 20926 Mm.20755 NM_009297 ENSMUSG00000002052 Supt6 5131400N11Rik|AI132449|SPT6|Supt6h|mKIAA0162 suppressor of Ty 6 protein-coding common_peak2_117_105_-0.135574348813764_6.66013328015632_0.38856635674804-2 chr16 17530272 17531465 + 0.38856635674804 NA intron (NM_026909, intron 1 of 4) CpG-5555 184 NM_026909 69009 Mm.10174 NM_026909 ENSMUSG00000022760 Thap7 1810004B07Rik THAP domain containing 7 protein-coding common_peak1_117_105_-0.135574348813764_6.66013328015632_0.38856635674804 chr16 96081563 96082491 + 0.38856635674804 NA intron (NM_145125, intron 2 of 41) CpG-5898 401 NM_001103179 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak1_117_105_-0.135574348813764_6.66013328015632_0.38856635674804-2 chr8 61622744 61624097 + 0.38856635674804 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -32251 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_191_145_0.0998861488455001_7.23976763330277_0.388341184142861 chr12 3308534 3309893 + 0.388341184142861 NA intron (NM_016676, intron 1 of 5) intron (NM_016676, intron 1 of 5) 756 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak2_191_145_0.0998861488455001_7.23976763330277_0.388341184142861 chr6 100704810 100706079 + 0.388341184142861 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 710 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak2_190_145_0.0924056260669994_7.23602737191352_0.388341184142861 chr7 83883171 83884940 + 0.388341184142861 NA 5' UTR (NM_030705, exon 1 of 1) 5' UTR (NM_030705, exon 1 of 1) 286 NM_030705 80889 Mm.272998 NM_030705 ENSMUSG00000070462 Tlnrd1 AW061151|Mesdc1 talin rod domain containing 1 protein-coding common_peak1_190_145_0.0924056260669994_7.23602737191352_0.388341184142861 chr12 101082813 101084296 + 0.388341184142861 NA non-coding (NR_038047, exon 1 of 4) non-coding (NR_038047, exon 1 of 4) 148 NM_211355 68734 Mm.87077 NM_211355 ENSMUSG00000041846 Ppp4r3a 1110034C04Rik|BC064465|Smek1|mKIAA2010 protein phosphatase 4 regulatory subunit 3A protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789 chr10 80070323 80070693 + 0.388034239052789 NA intron (NM_001359635, intron 5 of 31) intron (NM_001359635, intron 5 of 31) 4931 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-3 chr15 101119058 101119572 + 0.388034239052789 NA exon (NM_144790, exon 4 of 4) exon (NM_144790, exon 4 of 4) 3560 NM_001355656 208258 Mm.152952 NM_144790 ENSMUSG00000047034 Ankrd33 A930021G21Rik|Panky|Panky-a ankyrin repeat domain 33 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-6 chr5 107437922 107438210 + 0.388034239052789 NA promoter-TSS (NM_001255991) promoter-TSS (NM_001255991) 69 NM_001255991 100503185 Mm.366650 NM_001255991 ENSMUSG00000111375 Btbd8 EG627196|Gm16115 BTB (POZ) domain containing 8 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-8 chr5 52786121 52786606 + 0.388034239052789 NA intron (NM_030185, intron 3 of 11) PB1D9|SINE|Alu 3308 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-15 chr7 100977736 100977941 + 0.388034239052789 NA Intergenic Intergenic -13472 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-2 chr15 89078543 89078798 + 0.388034239052789 NA intron (NM_026485, intron 1 of 9) intron (NM_026485, intron 1 of 9) 2606 NM_001355617 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-12 chr2 163355419 163355802 + 0.388034239052789 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 42363 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-11 chr8 70657405 70657680 + 0.388034239052789 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 2196 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-16 chr7 118488393 118488776 + 0.388034239052789 NA 3' UTR (NM_001033380, exon 1 of 1) 3' UTR (NM_001033380, exon 1 of 1) 3391 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-8 chr19 45646582 45646959 + 0.388034239052789 NA intron (NM_013907, intron 1 of 8) intron (NM_013907, intron 1 of 8) 13423 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-3 chr11 79200803 79201334 + 0.388034239052789 NA Intergenic Intergenic 41956 NM_001042565 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-17 chrX 109141905 109142217 + 0.388034239052789 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 46654 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-4 chr15 31235368 31235706 + 0.388034239052789 NA intron (NM_146057, intron 1 of 3) intron (NM_146057, intron 1 of 3) 11152 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-4 chr18 5186415 5186781 + 0.388034239052789 NA Intergenic Intergenic -20867 NR_153824 102637682 Mm.451914 NR_153824 Gm26682 Gm38715 predicted gene, 26682 ncRNA common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789 chr10 21833490 21833791 + 0.388034239052789 NA Intergenic Intergenic -48544 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-6 chr4 135946556 135946823 + 0.388034239052789 NA promoter-TSS (NM_001357529) promoter-TSS (NM_001357529) 241 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-3 chr11 44519011 44519239 + 0.388034239052789 NA promoter-TSS (NM_001166553) promoter-TSS (NM_001166553) 161 NM_028862 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-10 chr2 9878877 9879357 + 0.388034239052789 NA promoter-TSS (NM_008091) promoter-TSS (NM_008091) -517 NM_001355112 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-7 chr5 130079513 130079822 + 0.388034239052789 NA intron (NM_001130476, intron 1 of 5) CpG 297 NM_001130476 22021 Mm.332720 NM_013837 ENSMUSG00000034118 Tpst1 R75054|Tango13a protein-tyrosine sulfotransferase 1 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-5 chr15 55266401 55266786 + 0.388034239052789 NA Intergenic Intergenic -41157 NM_181277 12818 Mm.297859 NM_181277 ENSMUSG00000022371 Col14a1 5730412L22Rik|AW108078 collagen, type XIV, alpha 1 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-2 chr10 24466057 24466413 + 0.388034239052789 NA Intergenic Intergenic -129207 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-13 chr9 82829539 82829781 + 0.388034239052789 NA promoter-TSS (NM_022986) promoter-TSS (NM_022986) -146 NM_022986 65099 Mm.41415 NM_022986 ENSMUSG00000032251 Irak1bp1 4921528N06Rik|AI851240|Aabp3|Aip70|Simpl interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-5 chr19 60041675 60041908 + 0.388034239052789 NA Intergenic Intergenic -98137 NM_001164367 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding unique_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-2 chrY 90784472 90784682 + 0.388034239052789 NA promoter-TSS (NM_133362) promoter-TSS (NM_133362) -865 NR_137282 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-8 chr7 49250141 49250616 + 0.388034239052789 NA intron (NM_175272, intron 1 of 37) GA-rich|Low_complexity|Low_complexity 4189 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-11 chr2 48441670 48442006 + 0.388034239052789 NA Intergenic Intergenic -372271 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-6 chr15 66867106 66867356 + 0.388034239052789 NA Intergenic L2|LINE|L2 -24162 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-12 chr8 108749136 108749383 + 0.388034239052789 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 34615 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-7 chr17 57011660 57011874 + 0.388034239052789 NA promoter-TSS (NM_133801) promoter-TSS (NM_133801) -479 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-2 chr11 62821658 62821961 + 0.388034239052789 NA intron (NM_053169, intron 1 of 5) intron (NM_053169, intron 1 of 5) 1556 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-4 chr11 94134259 94134521 + 0.388034239052789 NA Intergenic Intergenic -77064 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-5 chr3 58090018 58090532 + 0.388034239052789 NA Intergenic MamGypLTR2c|LTR|Gypsy 73532 NR_040538 67850 Mm.416968 NR_040538 ENSMUSG00000100666 1700007F19Rik - RIKEN cDNA 1700007F19 gene ncRNA unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-10 chr8 11370377 11370738 + 0.388034239052789 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -57731 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-13 chr4 150724426 150724917 + 0.388034239052789 NA Intergenic Intergenic -72497 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-9 chr19 53313496 53313871 + 0.388034239052789 NA intron (NM_001360348, intron 1 of 5) CpG 2238 NM_001360348 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-10 chr6 100719710 100719963 + 0.388034239052789 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 15102 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-9 chr5 92988672 92989168 + 0.388034239052789 NA Intergenic Intergenic 56102 NM_175270 78088 Mm.245085 NM_175270 ENSMUSG00000045314 Sowahb 5730467H21Rik|Ankrd56 sosondowah ankyrin repeat domain family member B protein-coding common_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-7 chr4 136433721 136433975 + 0.388034239052789 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 9236 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789 chr13 24800009 24800425 + 0.388034239052789 NA Intergenic Intergenic -1440 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding unique_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-9 chr7 113591295 113591805 + 0.388034239052789 NA Intergenic Intergenic -26563 NR_126544 69295 Mm.396150 NR_126544 ENSMUSG00000084984 Far1os 1700006P19Rik fatty acyl CoA reductase 1, opposite strand ncRNA unique_peak1_21_22_-0.337331573886709_4.35489616911366_0.388034239052789 chr4 83525048 83525264 + 0.388034239052789 NA promoter-TSS (NM_001355378) promoter-TSS (NM_001355378) -389 NM_001355549 320226 Mm.180032 NM_029117 ENSMUSG00000052407 Ccdc171 4930418J05Rik|4930473A06Rik|A330015D16Rik coiled-coil domain containing 171 protein-coding common_peak2_21_22_-0.337331573886709_4.35489616911366_0.388034239052789-14 chr7 66602304 66602672 + 0.388034239052789 NA Intergenic Intergenic 87073 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-6 chr16 57556341 57556870 + 0.388034239052786 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 7363 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-17 chr4 141547386 141547756 + 0.388034239052786 NA non-coding (NR_030695, exon 1 of 1) non-coding (NR_030695, exon 1 of 1) 1409 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786 chr11 104640238 104640720 + 0.388034239052786 NA intron (NM_016780, intron 7 of 14) intron (NM_016780, intron 7 of 14) 32479 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-2 chr12 104054711 104055211 + 0.388034239052786 NA Intergenic Intergenic -10518 NM_026535 68054 Mm.20286 NM_026535 ENSMUSG00000041567 Serpina12 4632419J12Rik serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-21 chr7 110843459 110843942 + 0.388034239052786 NA intron (NM_025999, intron 1 of 5) intron (NM_025999, intron 1 of 5) 681 NM_025999 67150 Mm.96867 NM_025999 ENSMUSG00000030788 Rnf141 2610110L04Rik|AA792898|AU022812|ZFP36|ZNF230 ring finger protein 141 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-7 chr14 47299709 47300348 + 0.388034239052786 NA intron (NM_178684, intron 1 of 3) B3A|SINE|B2 1754 NM_001360542 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-6 chr14 41486484 41486942 + 0.388034239052786 NA Intergenic Intergenic -86498 NM_001358037 100041722 Mm.425891 NM_001358037 ENSMUSG00000090440 1700049E17Rik2 - tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2 protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-7 chr5 24824095 24824406 + 0.388034239052786 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 18111 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-2 chr10 17103979 17104270 + 0.388034239052786 NA Intergenic Intergenic -8342 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-13 chr3 41199767 41200323 + 0.388034239052786 NA Intergenic Intergenic -116999 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-9 chr19 9064859 9065294 + 0.388034239052786 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 22880 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-4 chr17 34644820 34645109 + 0.388034239052786 NA promoter-TSS (NM_019873) promoter-TSS (NM_019873) 81 NM_019873 56299 Mm.10025 NM_019873 ENSMUSG00000033739 Fkbpl DIR1|NG7|Ppiase-X|Wisp39 FK506 binding protein-like protein-coding unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-3 chr14 24205902 24206412 + 0.388034239052786 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 39763 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-8 chr5 35041821 35042118 + 0.388034239052786 NA intron (NM_019447, intron 1 of 13) intron (NM_019447, intron 1 of 13) 460 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-18 chr6 127972455 127972831 + 0.388034239052786 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 85021 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-4 chr15 11536551 11536856 + 0.388034239052786 NA Intergenic Intergenic -137045 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-22 chr7 144042977 144043285 + 0.388034239052786 NA Intergenic Intergenic 33877 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-5 chr17 45753077 45753288 + 0.388034239052786 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 18676 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-14 chr3 79679174 79679550 + 0.388034239052786 NA intron (NM_212452, intron 4 of 17) intron (NM_212452, intron 4 of 17) 50283 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-10 chr19 40493056 40493261 + 0.388034239052786 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 20578 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-8 chr18 73703029 73703364 + 0.388034239052786 NA promoter-TSS (NR_155448) promoter-TSS (NR_155448) 545 NM_008540 17128 Mm.100399 NM_008540 ENSMUSG00000024515 Smad4 AW743858|D18Wsu70e|DPC4|Madh4 SMAD family member 4 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-19 chr6 131293035 131293318 + 0.388034239052786 NA promoter-TSS (NM_025564) promoter-TSS (NM_025564) 68 NM_001327860 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-23 chr8 111596840 111597220 + 0.388034239052786 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 33292 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-24 chrX 38634718 38635044 + 0.388034239052786 NA intron (NM_021550, intron 1 of 1) intron (NM_021550, intron 1 of 1) 262 NM_021550 59048 Mm.441410 NM_021550 ENSMUSG00000048970 C1galt1c1 1500002I11Rik|AB030184|C1GalT2|C81205|Cosmc C1GALT1-specific chaperone 1 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-15 chr3 131365441 131365958 + 0.388034239052786 NA Intergenic Intergenic -20776 NM_028943 74442 Mm.273360 NM_028943 ENSMUSG00000050931 Sgms2 4933405A16Rik|5133401H06Rik|AI854299 sphingomyelin synthase 2 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-11 chr2 30252075 30252333 + 0.388034239052786 NA intron (NM_177725, intron 2 of 3) intron (NM_177725, intron 2 of 3) -13999 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786 chr1 36030112 36030488 + 0.388034239052786 NA Intergenic Intergenic -38100 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-16 chr4 89349392 89349696 + 0.388034239052786 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -38512 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-12 chr2 84518042 84518448 + 0.388034239052786 NA Intergenic (TGGA)n|Simple_repeat|Simple_repeat -11372 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-20 chr7 37320411 37320849 + 0.388034239052786 NA Intergenic Intergenic 449122 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-7 chrX 75833149 75833599 + 0.388034239052786 NA intron (NM_001346519, intron 1 of 16) intron (NM_001346519, intron 1 of 16) 9647 NM_001166454 102866 Mm.28777 NM_145629 ENSMUSG00000016382 Pls3 AI115446|AL024105 plastin 3 (T-isoform) protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-2 chr10 109903609 109903930 + 0.388034239052786 NA exon (NM_001081035, exon 2 of 39) exon (NM_001081035, exon 2 of 39) 96450 NM_001081035 260315 Mm.225050 NM_177797 ENSMUSG00000020181 Nav3 4732483H20Rik|9630020C08Rik|POMFIL1|Pomfil1p|mKIAA0938|unc53H3 neuron navigator 3 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-5 chr13 104109156 104109543 + 0.388034239052786 NA promoter-TSS (NM_001361054) promoter-TSS (NM_001361054) 265 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-9 chr7 116208500 116208933 + 0.388034239052786 NA intron (NM_001305185, intron 3 of 26) ID_B1|SINE|B4 -10155 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-10 chr8 117348019 117348295 + 0.388034239052786 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -1013 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-3 chr15 42369277 42369627 + 0.388034239052786 NA Intergenic Intergenic 307525 NM_001286062 11600 Mm.309336 NM_009640 ENSMUSG00000022309 Angpt1 1110046O21Rik|Ang-1|Ang1 angiopoietin 1 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-4 chr12 4817065 4817400 + 0.388034239052786 NA promoter-TSS (NM_025323) promoter-TSS (NM_025323) -376 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786 chr1 156069494 156069790 + 0.388034239052786 NA TTS (NM_001358627) TTS (NM_001358627) 28781 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding unique_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-5 chr16 45876297 45876565 + 0.388034239052786 NA Intergenic Intergenic -31680 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_26_18_0.231674317029817_4.36376467195849_0.388034239052786-3 chr11 97310887 97311197 + 0.388034239052786 NA Intergenic Intergenic -4674 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-6 chr2 32687896 32688340 + 0.388034239052786 NA promoter-TSS (NR_106168) promoter-TSS (NR_106168) -352 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA unique_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786-2 chr15 99041279 99041672 + 0.388034239052786 NA Intergenic Intergenic 11584 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding unique_peak2_26_18_0.231674317029817_4.36376467195849_0.388034239052786 chr1 40392817 40393214 + 0.388034239052786 NA Intergenic Intergenic -36555 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-4 chr10 7955321 7956100 + 0.387953346623085 NA intron (NM_138667, intron 1 of 6) CpG 413 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-4 chr16 43363926 43364618 + 0.387953346623085 NA intron (NM_181058, intron 2 of 6) intron (NM_181058, intron 2 of 6) 55924 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak2_58_42_0.173136330620582_5.51283292001239_0.387953346623085-4 chr8 94300461 94300859 + 0.387953346623085 NA intron (NM_001357268, intron 6 of 20) intron (NM_001357268, intron 6 of 20) -23651 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-8 chr8 122145795 122146138 + 0.387953346623085 NA Intergenic Intergenic -136175 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_50_48_-0.224043384551302_5.50268815183956_0.387953346623085-5 chr8 106377397 106378249 + 0.387953346623085 NA Intergenic Intergenic -37516 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak2_57_42_0.148648266675169_5.50058888803968_0.387953346623085-2 chr2 31442157 31442478 + 0.387953346623085 NA Intergenic Intergenic -27953 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak2_50_48_-0.224043384551302_5.50268815183956_0.387953346623085-4 chr8 11261977 11262594 + 0.387953346623085 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -50520 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_58_42_0.173136330620582_5.51283292001239_0.387953346623085-3 chr2 151494386 151494790 + 0.387953346623085 NA intron (NM_198326, intron 1 of 8) CpG 406 NM_198326 386649 Mm.419479 NM_198326 ENSMUSG00000027455 Nsfl1c Munc-18c|Stxbp3a|p47 NSFL1 (p97) cofactor (p47) protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-7 chr6 5140087 5140777 + 0.387953346623085 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 53514 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-7 chr4 82859273 82859912 + 0.387953346623085 NA promoter-TSS (NM_026647) promoter-TSS (NM_026647) 81 NR_149737 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding common_peak2_57_42_0.148648266675169_5.50058888803968_0.387953346623085-3 chr3 53101973 53102497 + 0.387953346623085 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 60688 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-6 chr2 72318128 72318609 + 0.387953346623085 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 32667 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_50_48_-0.224043384551302_5.50268815183956_0.387953346623085-3 chr7 30169366 30170011 + 0.387953346623085 NA promoter-TSS (NM_001357557) promoter-TSS (NM_001357557) 53 NM_011980 26465 Mm.446516 NM_011980 ENSMUSG00000037029 Zfp146 OZF|Znf146 zinc finger protein 146 protein-coding common_peak2_50_48_-0.224043384551302_5.50268815183956_0.387953346623085-2 chr10 40036499 40037595 + 0.387953346623085 NA 3' UTR (NM_001114332, exon 6 of 6) 3' UTR (NM_001114332, exon 6 of 6) -11779 NM_144821 215929 Mm.55513 NM_144821 ENSMUSG00000038522 Mfsd4b1 AI317395|AI482555|Naglt1a major facilitator superfamily domain containing 4B1 protein-coding common_peak1_50_48_-0.224043384551302_5.50268815183956_0.387953346623085 chr11 70764348 70765080 + 0.387953346623085 NA intron (NM_177565, intron 1 of 1) intron (NM_177565, intron 1 of 1) 267 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding unique_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085 chr19 47247340 47248308 + 0.387953346623085 NA intron (NM_001163480, intron 3 of 5) intron (NM_001163480, intron 3 of 5) 18981 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding common_peak2_58_42_0.173136330620582_5.51283292001239_0.387953346623085 chr12 110207009 110207525 + 0.387953346623085 NA Intergenic Intergenic -49194 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-8 chr7 127588753 127589355 + 0.387953346623085 NA promoter-TSS (NM_001033040) promoter-TSS (NM_001033040) 129 NM_001360883 233900 Mm.41122 NM_172281 ENSMUSG00000030816 Rnf40 AI848422|BRE1-B|mKIAA0661 ring finger protein 40 protein-coding common_peak1_50_48_-0.224043384551302_5.50268815183956_0.387953346623085-2 chr2 30807988 30808543 + 0.387953346623085 NA promoter-TSS (NM_001356437) promoter-TSS (NM_001356437) 82 NM_001356437 66617 Mm.33167 NM_170592 ENSMUSG00000026857 Ntmt1 2610205E22Rik|AL033331|AL033332|Mettl11a|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding common_peak2_57_42_0.148648266675169_5.50058888803968_0.387953346623085 chr11 3649263 3649731 + 0.387953346623085 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) 3 NM_001159288 74522 Mm.139127 NM_198162 ENSMUSG00000034543 Morc2a 8430403M08Rik|Zcwcc1 microrchidia 2A protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085 chr11 44470696 44471409 + 0.387953346623085 NA promoter-TSS (NM_024475) promoter-TSS (NM_024475) -504 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-3 chr15 36937976 36938685 + 0.387953346623085 NA Intergenic Intergenic 69072 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-3 chr1 192770759 192771473 + 0.387953346623085 NA 5' UTR (NM_144881, exon 1 of 12) 5' UTR (NM_144881, exon 1 of 12) 103 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-2 chr1 179545369 179546233 + 0.387953346623085 NA promoter-TSS (NM_146105) promoter-TSS (NM_146105) 475 NM_001331054 15278 Mm.293529 NM_008249 ENSMUSG00000026492 Tfb2m Hkp1 transcription factor B2, mitochondrial protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-6 chr17 21566559 21567497 + 0.387953346623085 NA promoter-TSS (NM_001357347) promoter-TSS (NM_001357347) 50 NM_001357347 381066 Mm.441097 NM_001002008 ENSMUSG00000067931 Zfp948 - zinc finger protein 948 protein-coding common_peak2_50_48_-0.224043384551302_5.50268815183956_0.387953346623085 chr1 51477386 51478338 + 0.387953346623085 NA exon (NM_028696, exon 1 of 6) exon (NM_028696, exon 1 of 6) 537 NM_001310548 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085 chr1 86109979 86110672 + 0.387953346623085 NA intron (NM_008311, intron 2 of 3) intron (NM_008311, intron 2 of 3) 1645 NM_008311 15559 Mm.439747 NM_008311 ENSMUSG00000026228 Htr2b 5-HT2B|AJ012488|AV377389 5-hydroxytryptamine (serotonin) receptor 2B protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-2 chr15 25933500 25934191 + 0.387953346623085 NA intron (NM_001277318, intron 1 of 6) intron (NM_001277318, intron 1 of 6) 293 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak2_58_42_0.173136330620582_5.51283292001239_0.387953346623085-2 chr2 72317959 72318520 + 0.387953346623085 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 32538 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_57_42_0.148648266675169_5.50058888803968_0.387953346623085-5 chr13 80886202 80887102 + 0.387953346623085 NA intron (NR_153411, intron 1 of 7) intron (NR_153411, intron 1 of 7) 557 NR_153411 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak1_58_42_0.173136330620582_5.51283292001239_0.387953346623085-5 chr16 44173251 44174043 + 0.387953346623085 NA intron (NM_001029889, intron 1 of 7) CpG 250 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak2_92_84_-0.158105794357465_6.33033803895897_0.387925119491232-2 chr19 61266656 61267034 + 0.387925119491232 NA Intergenic CpG -38427 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_102_76_0.130800824363326_6.33218695287656_0.387925119491232 chr19 17874716 17875875 + 0.387925119491232 NA Intergenic Intergenic -37663 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding common_peak1_92_84_-0.158105794357465_6.33033803895897_0.387925119491232 chr19 61266655 61267035 + 0.387925119491232 NA Intergenic CpG -38427 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_92_84_-0.158105794357465_6.33033803895897_0.387925119491232-3 chr6 115272165 115273222 + 0.387925119491232 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -20488 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding common_peak1_102_76_0.130800824363326_6.33218695287656_0.387925119491232 chr16 17508442 17509808 + 0.387925119491232 NA promoter-TSS (NM_001331226) promoter-TSS (NM_001331226) -87 NM_001331226 66863 Mm.161726 NM_025808 ENSMUSG00000022761 Lztr1 1200003E21Rik|AI591627|AW550890 leucine-zipper-like transcriptional regulator, 1 protein-coding common_peak1_102_76_0.130800824363326_6.33218695287656_0.387925119491232-2 chr18 77713340 77714464 + 0.387925119491232 NA promoter-TSS (NR_027978) promoter-TSS (NR_027978) 108 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding common_peak2_92_84_-0.158105794357465_6.33033803895897_0.387925119491232 chr18 75366788 75367185 + 0.387925119491232 NA promoter-TSS (NM_001042660) promoter-TSS (NM_001042660) 102 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak2_192_146_0.0974800256338275_7.24841235765328_0.387764618429359 chr11 84078470 84080428 + 0.387764618429359 NA 3' UTR (NM_172562, exon 16 of 16) 3' UTR (NM_172562, exon 16 of 16) -11092 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak1_129_97_0.116375269947295_6.67289747908886_0.387703360961336 chr12 55155058 55156249 + 0.387703360961336 NA intron (NM_001100109, intron 1 of 15) CpG 549 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000112449 Srp54b - signal recognition particle 54B protein-coding common_peak2_129_97_0.116375269947295_6.67289747908886_0.387703360961336 chr3 37311916 37312981 + 0.387703360961336 NA promoter-TSS (NM_001255992) promoter-TSS (NM_001255992) -2 NM_145825 207175 Mm.344708 NM_145825 ENSMUSG00000045031 Cetn4 - centrin 4 protein-coding common_peak2_118_106_-0.137032059063809_6.67295095686924_0.387703360961311-2 chr2 32686048 32687441 + 0.387703360961311 NA TTS (NR_106168) TTS (NR_106168) 1022 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak2_118_106_-0.137032059063809_6.67295095686924_0.387703360961311 chr17 79614774 79615678 + 0.387703360961311 NA intron (NM_201361, intron 1 of 10) CpG 326 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak2_70_65_-0.179773377651722_5.95450743053259_0.387582563723712-2 chr11 83473118 83473853 + 0.387582563723712 NA intron (NM_027427, intron 1 of 15) CpG 377 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak2_70_65_-0.179773377651722_5.95450743053259_0.387582563723712 chr1 71653412 71654103 + 0.387582563723712 NA promoter-TSS (NM_001276410) promoter-TSS (NM_001276410) 422 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak2_70_65_-0.179773377651722_5.95450743053259_0.387582563723712-5 chr19 10602538 10603047 + 0.387582563723712 NA intron (NM_145496, intron 1 of 16) intron (NM_145496, intron 1 of 16) 1466 NM_145496 225913 Mm.374868 NM_145496 ENSMUSG00000034371 Tkfc BC021917|Dak triokinase, FMN cyclase protein-coding common_peak1_78_58_0.134924616913435_5.95010535781856_0.387582563723712 chr1 39535678 39536377 + 0.387582563723712 NA exon (NM_028043, exon 1 of 7) exon (NM_028043, exon 1 of 7) 326 NM_028043 52846 Mm.259421 NM_028043 ENSMUSG00000003135 Cnot11 2410015L18Rik|C40|D1Bwg0212e CCR4-NOT transcription complex, subunit 11 protein-coding common_peak1_70_65_-0.179773377651722_5.95450743053259_0.387582563723712-2 chr7 24459203 24460125 + 0.387582563723712 NA Intergenic Intergenic -2819 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak2_70_65_-0.179773377651722_5.95450743053259_0.387582563723712-4 chr15 102279479 102280093 + 0.387582563723712 NA intron (NM_134100, intron 1 of 1) CpG 330 NM_134100 106073 Mm.287740 NM_134100 ENSMUSG00000045665 Mfsd5 AA409375|AW556797|D15Mgi27 major facilitator superfamily domain containing 5 protein-coding common_peak1_70_65_-0.179773377651722_5.95450743053259_0.387582563723712 chr1 43237646 43238193 + 0.387582563723712 NA Intergenic Intergenic -41158 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_70_65_-0.179773377651722_5.95450743053259_0.387582563723712-6 chr2 72321279 72322347 + 0.387582563723712 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 36112 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_78_58_0.134924616913435_5.95010535781856_0.387582563723712 chr13 102905350 102905982 + 0.387582563723712 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 145411 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_78_58_0.134924616913435_5.95010535781856_0.387582563723712-2 chr19 18747780 18748532 + 0.387582563723712 NA Intergenic MER87|LTR|ERV1 -1827 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_78_58_0.134924616913435_5.95010535781856_0.387582563723712-3 chr8 88137893 88138403 + 0.387582563723712 NA promoter-TSS (NR_106039) promoter-TSS (NR_106039) -58 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA common_peak2_70_65_-0.179773377651722_5.95450743053259_0.387582563723712-3 chr11 107469908 107470630 + 0.387582563723712 NA non-coding (NR_153311, exon 1 of 10) non-coding (NR_153311, exon 1 of 10) 451 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_311_239_0.0783182423543183_7.94604971678568_0.387547484888417 chr5 125079860 125082624 + 0.387547484888417 NA intron (NM_011424, intron 12 of 46) intron (NM_011424, intron 12 of 46) 77767 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-3 chr2 32363064 32363696 + 0.387290225425543 NA 5' UTR (NM_001252537, exon 1 of 18) 5' UTR (NM_001252537, exon 1 of 18) 182 NM_028412 68379 Mm.170508 NM_028412 ENSMUSG00000039205 Ciz1 0610038H21Rik|2900056O04Rik|LSFR1|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding common_peak1_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-2 chr7 80947546 80947821 + 0.387290225425543 NA promoter-TSS (NM_019951) promoter-TSS (NM_019951) -133 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding common_peak2_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-2 chr14 69502618 69503250 + 0.387290225425543 NA Intergenic CpG 9615 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_34_34_-0.277927024399163_4.99031950474538_0.387290225425543 chr6 42512226 42512796 + 0.387290225425543 NA Intergenic Intergenic -25297 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak2_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-5 chr6 72512845 72513362 + 0.387290225425543 NA Intergenic Intergenic -31288 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-4 chr9 96800089 96800511 + 0.387290225425543 NA Intergenic Intergenic 34738 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-4 chr5 148373542 148374027 + 0.387290225425543 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 19031 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_34_34_-0.277927024399163_4.99031950474538_0.387290225425543 chr10 61475821 61476317 + 0.387290225425543 NA intron (NM_153542, intron 1 of 4) CpG 236 NM_153542 216011 Mm.136116 NM_153542 ENSMUSG00000037151 Lrrc20 BC036304 leucine rich repeat containing 20 protein-coding common_peak1_34_34_-0.277927024399163_4.99031950474538_0.387290225425543-3 chr9 56107243 56107535 + 0.387290225425543 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 17413 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_40_29_0.171123951565163_4.9924525713911_0.387290225425537 chr11 88529764 88530224 + 0.387290225425537 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -89257 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-3 chr14 54687177 54687628 + 0.387290225425537 NA promoter-TSS (NM_023190) promoter-TSS (NM_023190) -471 NM_023190 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-4 chr14 73143093 73143505 + 0.387290225425537 NA intron (NR_033185, intron 1 of 15) CpG 514 NR_033185 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-7 chr2 152293980 152294350 + 0.387290225425537 NA intron (NM_024196, intron 1 of 7) CpG 293 NM_024196 67231 Mm.288733 NM_024196 ENSMUSG00000027465 Tbc1d20 1110028I04Rik|2810442O16Rik|AI414693|bs TBC1 domain family, member 20 protein-coding common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-10 chr8 105553695 105554223 + 0.387290225425537 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 12105 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-6 chr2 32259577 32259964 + 0.387290225425537 NA intron (NM_011675, intron 1 of 6) intron (NM_011675, intron 1 of 6) 335 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak1_40_29_0.171123951565163_4.9924525713911_0.387290225425537-6 chr9 120013218 120013579 + 0.387290225425537 NA TTS (NM_011724) TTS (NM_011724) 10200 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-5 chr18 75500315 75500758 + 0.387290225425537 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -14109 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_40_29_0.171123951565163_4.9924525713911_0.387290225425537-5 chr9 102752309 102753092 + 0.387290225425537 NA intron (NR_033301, intron 3 of 3) intron (NR_033301, intron 3 of 3) 13052 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-8 chr6 108659676 108660266 + 0.387290225425537 NA promoter-TSS (NM_011498) promoter-TSS (NM_011498) -658 NM_011498 20893 Mm.2436 NM_011498 ENSMUSG00000030103 Bhlhe40 Bhlhb2|C130042M06Rik|CR8|Clast5|Dec1|Sharp2|Stra13|Stra14 basic helix-loop-helix family, member e40 protein-coding common_peak1_40_29_0.171123951565163_4.9924525713911_0.387290225425537-4 chr8 126876783 126877130 + 0.387290225425537 NA Intergenic Intergenic 27936 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537 chr13 113403279 113403703 + 0.387290225425537 NA Intergenic Intergenic 99353 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_40_29_0.171123951565163_4.9924525713911_0.387290225425537-3 chr2 144173655 144174388 + 0.387290225425537 NA non-coding (NR_136884, exon 4 of 4) non-coding (NR_136884, exon 4 of 4) 15269 NR_136884 433481 Mm.330630 NR_136884 ENSMUSG00000074758 Gm5535 EG433481 predicted gene 5535 ncRNA common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-2 chr14 25488387 25488827 + 0.387290225425537 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 29422 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_40_29_0.171123951565163_4.9924525713911_0.387290225425537-2 chr18 56924754 56925345 + 0.387290225425537 NA intron (NM_177115, intron 1 of 4) CpG 499 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak2_40_29_0.171123951565163_4.9924525713911_0.387290225425537-9 chr7 80787202 80787491 + 0.387290225425537 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 15985 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_159_121_0.0977946666890555_6.97963467090741_0.387222165233646-2 chr2 80579927 80581648 + 0.387222165233646 NA intron (NM_001290745, intron 1 of 31) CpG 395 NM_001290745 50884 Mm.25203 NM_016965 ENSMUSG00000027002 Nckap1 C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1 NCK-associated protein 1 protein-coding common_peak2_159_121_0.0977946666890555_6.97963467090741_0.387222165233646 chr1 39576134 39577370 + 0.387222165233646 NA intron (NM_001033135, intron 1 of 6) CpG 595 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4 ring finger protein 149 protein-coding common_peak1_230_176_0.0870095247424016_7.5111103124542_0.386949965958988 chr3 87970305 87972802 + 0.386949965958988 NA exon (NM_016701, exon 1 of 4) exon (NM_016701, exon 1 of 4) 460 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak2_119_107_-0.138464916110827_6.68565504410805_0.386857220532368-2 chr15 79658577 79659571 + 0.386857220532368 NA promoter-TSS (NM_029407) promoter-TSS (NM_029407) -118 NM_029407 75729 Mm.78946 NM_029407 ENSMUSG00000042564 Fam227a 4933432B09Rik family with sequence similarity 227, member A protein-coding common_peak2_119_107_-0.138464916110827_6.68565504410805_0.386857220532368 chr11 8462434 8463269 + 0.386857220532368 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 201684 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_119_107_-0.138464916110827_6.68565504410805_0.386857220532368 chr10 127041116 127042480 + 0.386857220532368 NA promoter-TSS (NM_001205036) promoter-TSS (NM_001205036) -134 NM_010792 17299 Mm.251593 NM_010792 ENSMUSG00000006732 Mettl1 2810012D02Rik methyltransferase like 1 protein-coding common_peak1_130_98_0.112705688362781_6.685709464261_0.386857220532368 chr9 49796444 49797862 + 0.386857220532368 NA intron (NM_010875, intron 1 of 15) CpG 1916 NM_001113204 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak2_103_77_0.126025996446375_6.34841521708544_0.386851461318747 chr5 24820865 24822261 + 0.386851461318747 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 20798 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_93_85_-0.159658430973288_6.34643553921545_0.386851461318747 chr10 58446880 58447640 + 0.386851461318747 NA intron (NM_011240, intron 1 of 28) CpG 408 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak1_93_85_-0.159658430973288_6.34643553921545_0.386851461318747-2 chr5 122706844 122708394 + 0.386851461318747 NA promoter-TSS (NM_011026) promoter-TSS (NM_011026) 75 NM_001310718 18438 Mm.290884 NM_011026 ENSMUSG00000029470 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 protein-coding common_peak2_194_148_0.0927521958277975_7.26554461837606_0.38663403841549 chr13 49297573 49299058 + 0.38663403841549 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 10893 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_161_122_0.10381296821513_6.99442098944681_0.386543134342364 chr11 117986628 117988284 + 0.386543134342364 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 599 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_231_177_0.0850696312643811_7.51826824659859_0.386480289109852 chr2 20967065 20969619 + 0.386480289109852 NA promoter-TSS (NR_033225) promoter-TSS (NR_033225) -532 NR_033225 433408 Mm.386941 NR_033225 Gm13375 - predicted gene 13375 ncRNA unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-5 chr10 7182033 7182244 + 0.386243247519795 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 30099 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-2 chr10 80069816 80070035 + 0.386243247519795 NA intron (NM_001359635, intron 6 of 31) intron (NM_001359635, intron 6 of 31) 5514 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-21 chr4 89439446 89439645 + 0.386243247519795 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -128513 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-9 chr5 20882543 20882761 + 0.386243247519795 NA promoter-TSS (NM_172992) promoter-TSS (NM_172992) 199 NM_177601 212090 Mm.347525 NM_177601 ENSMUSG00000045435 Tmem60 BC027828 transmembrane protein 60 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-10 chr13 45826702 45827026 + 0.386243247519795 NA intron (NM_001199304, intron 3 of 6) intron (NM_001199304, intron 3 of 6) 138127 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-25 chr5 90625104 90625386 + 0.386243247519795 NA intron (NM_001310656, intron 2 of 10) intron (NM_001310656, intron 2 of 10) 15282 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-9 chr2 25549822 25550101 + 0.386243247519795 NA Intergenic Intergenic -3021 NM_009422 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-8 chr11 88494798 88495063 + 0.386243247519795 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -124321 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-29 chr4 141427904 141428166 + 0.386243247519795 NA Intergenic Intergenic 7256 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-7 chr6 145972480 145972741 + 0.386243247519795 NA Intergenic Intergenic 38488 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-12 chr9 98312841 98313140 + 0.386243247519795 NA intron (NM_001357445, intron 1 of 3) intron (NM_001357445, intron 1 of 3) 16420 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-5 chr2 117674893 117675198 + 0.386243247519795 NA Intergenic Intergenic 137757 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-10 chr2 126309905 126310162 + 0.386243247519795 NA Intergenic Intergenic 157892 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding unique_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795 chr1 171221926 171222201 + 0.386243247519795 NA 5' UTR (NM_001037170, exon 2 of 10) 5' UTR (NM_001037170, exon 2 of 10) 451 NM_001037170 641376 Mm.288374 NM_001037170 ENSMUSG00000005674 Tomm40l - translocase of outer mitochondrial membrane 40-like protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-14 chr5 115124767 115124984 + 0.386243247519795 NA 3' UTR (NM_175352, exon 5 of 5) 3' UTR (NM_175352, exon 5 of 5) -5529 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-20 chr2 131159545 131159784 + 0.386243247519795 NA intron (NR_154887, intron 1 of 6) intron (NR_154887, intron 1 of 6) 417 NR_154887 67326 Mm.27711 NM_026091 ENSMUSG00000027327 1700037H04Rik - RIKEN cDNA 1700037H04 gene protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-11 chr13 64377388 64377674 + 0.386243247519795 NA Intergenic Intergenic -7011 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-3 chr13 51128031 51128233 + 0.386243247519795 NA intron (NM_146043, intron 3 of 5) intron (NM_146043, intron 3 of 5) -6186 NM_011462 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding unique_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-5 chr6 145989790 145990091 + 0.386243247519795 NA Intergenic Intergenic 55818 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-35 chr7 19327046 19327250 + 0.386243247519795 NA Intergenic Intergenic -17103 NM_001347586 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-4 chr18 32162455 32162695 + 0.386243247519795 NA promoter-TSS (NM_011946) promoter-TSS (NM_011946) -514 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-14 chr14 18234456 18234818 + 0.386243247519795 NA intron (NM_011584, intron 1 of 7) intron (NM_011584, intron 1 of 7) 4469 NM_011584 353187 Mm.26587 NM_011584 ENSMUSG00000021775 Nr1d2 RVR|Rev-erb nuclear receptor subfamily 1, group D, member 2 protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-11 chr7 109167009 109167243 + 0.386243247519795 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 3386 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-18 chr2 110182715 110183033 + 0.386243247519795 NA Intergenic Intergenic 122851 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-13 chrX 12937046 12937358 + 0.386243247519795 NA exon (NM_001272033, exon 1 of 1) exon (NM_001272033, exon 1 of 1) 329 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-3 chr10 43629654 43630039 + 0.386243247519795 NA non-coding (NR_033558, exon 3 of 3) non-coding (NR_033558, exon 3 of 3) 36419 NR_033558 414125 Mm.244305 NR_033558 ENSMUSG00000075184 F830002L21Rik F930017D23Rik RIKEN cDNA F830002L21 gene ncRNA common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-2 chr13 35395232 35395432 + 0.386243247519795 NA Intergenic Intergenic -183284 NR_126478 75543 Mm.489052 NR_126478 ENSMUSG00000113770 1700019C18Rik - RIKEN cDNA 1700019C18 gene ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-17 chr16 58414914 58415225 + 0.386243247519795 NA intron (NM_001356484, intron 1 of 15) intron (NM_001356484, intron 1 of 15) 6534 NM_028523 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-18 chr9 21411898 21412194 + 0.386243247519795 NA promoter-TSS (NR_045742) promoter-TSS (NR_045742) 209 NM_021888 60507 Mm.436579 NM_021888 ENSMUSG00000002825 Qtrt1 2610028E17Rik|Tgt queuine tRNA-ribosyltransferase catalytic subunit 1 protein-coding unique_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-2 chr14 76527314 76527646 + 0.386243247519795 NA Intergenic Intergenic -6625 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-6 chr10 14313686 14313995 + 0.386243247519795 NA Intergenic Intergenic 231196 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-32 chr5 121833542 121833883 + 0.386243247519795 NA intron (NM_001306127, intron 1 of 8) intron (NM_001306127, intron 1 of 8) 2392 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-3 chr16 23455033 23455306 + 0.386243247519795 NA intron (NM_008555, intron 13 of 15) intron (NM_008555, intron 13 of 15) 26036 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-7 chr10 93938461 93938734 + 0.386243247519795 NA Intergenic Intergenic 25266 NR_029764 723908 NR_029764 ENSMUSG00000065607 Mir331 Mirn331|mmu-mir-331 microRNA 331 ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-24 chr3 90486708 90486915 + 0.386243247519795 NA intron (NM_026374, intron 10 of 13) intron (NM_026374, intron 10 of 13) 4202 NM_133854 20615 Mm.331182 NM_133854 ENSMUSG00000001018 Snapin 25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap SNAP-associated protein protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-9 chr12 108554998 108555240 + 0.386243247519795 NA 5' UTR (NM_007965, exon 1 of 13) 5' UTR (NM_007965, exon 1 of 13) 399 NM_007965 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774|b2b2600Clo Ena-vasodilator stimulated phosphoprotein protein-coding unique_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-3 chr9 22386487 22386704 + 0.386243247519795 NA intron (NM_028390, intron 1 of 23) intron (NM_028390, intron 1 of 23) 2611 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-7 chr4 43442650 43442898 + 0.386243247519795 NA 5' UTR (NM_011571, exon 1 of 10) 5' UTR (NM_011571, exon 1 of 10) 497 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-10 chr5 135186897 135187115 + 0.386243247519795 NA promoter-TSS (NM_011714) promoter-TSS (NM_011714) -317 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-37 chr7 83307616 83307841 + 0.386243247519795 NA Intergenic Intergenic 159258 NM_177895 330578 Mm.5796 NM_177895 ENSMUSG00000053528 A530021J07Rik - Riken cDNA A530021J07 gene protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-4 chr11 116102315 116102534 + 0.386243247519795 NA Intergenic Intergenic 7811 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-6 chr10 120582328 120582536 + 0.386243247519795 NA Intergenic Intergenic -105963 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-41 chr9 108570007 108570212 + 0.386243247519795 NA intron (NM_026378, intron 1 of 11) CpG 217 NM_026378 67789 Mm.458081 NM_026378 ENSMUSG00000019039 Dalrd3 6330580J24Rik|C77829|mir-425 DALR anticodon binding domain containing 3 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-38 chr7 100910443 100910857 + 0.386243247519795 NA intron (NM_001081116, intron 1 of 20) intron (NM_001081116, intron 1 of 20) 21511 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-7 chr19 29217023 29217222 + 0.386243247519795 NA Intergenic Intergenic -34681 NM_001048177 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-6 chr2 165859805 165860033 + 0.386243247519795 NA intron (NM_001252587, intron 2 of 11) MIRb|SINE|MIR -1746 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-23 chr3 87960829 87961019 + 0.386243247519795 NA Intergenic Intergenic -10169 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-6 chr17 35811298 35811537 + 0.386243247519795 NA Intergenic Intergenic -10296 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-12 chr4 19569749 19569967 + 0.386243247519795 NA intron (NM_027769, intron 1 of 15) CpG 250 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795 chr1 14308199 14308590 + 0.386243247519795 NA intron (NM_010164, intron 1 of 17) intron (NM_010164, intron 1 of 17) 1805 NM_001310459 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-5 chr10 79986831 79987023 + 0.386243247519795 NA intron (NR_038088, intron 1 of 4) Cheshire|DNA|hAT-Charlie -1673 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding unique_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-3 chr18 65026102 65026304 + 0.386243247519795 NA intron (NM_031881, intron 1 of 29) intron (NM_031881, intron 1 of 29) 2676 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-27 chr8 84903077 84903343 + 0.386243247519795 NA exon (NM_010635, exon 2 of 3) exon (NM_010635, exon 2 of 3) 1282 NM_010635 16596 Mm.4847 NM_010635 ENSMUSG00000054191 Klf1 Eklf|Nan Kruppel-like factor 1 (erythroid) protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-17 chr2 69884711 69885007 + 0.386243247519795 NA intron (NR_110977, intron 1 of 5) intron (NR_110977, intron 1 of 5) 756 NM_029280 75422 Mm.10508 NM_029280 ENSMUSG00000051730 Mettl5 2810410A08Rik methyltransferase like 5 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-8 chr19 58533614 58533819 + 0.386243247519795 NA intron (NM_029372, intron 5 of 8) intron (NM_029372, intron 5 of 8) 21714 NM_029372 75645 Mm.159542 NM_029372 ENSMUSG00000025090 Ccdc172 1700011F14Rik coiled-coil domain containing 172 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-18 chr19 9093427 9093747 + 0.386243247519795 NA Intergenic Intergenic -5631 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-11 chr13 59647588 59647797 + 0.386243247519795 NA intron (NM_001035122, intron 5 of 9) intron (NM_001035122, intron 5 of 9) 28092 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-26 chr3 122202034 122202273 + 0.386243247519795 NA Intergenic Intergenic -43404 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-8 chr8 61622135 61622402 + 0.386243247519795 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -31099 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-16 chr17 28330518 28330791 + 0.386243247519795 NA exon (NM_011287, exon 5 of 6) exon (NM_011287, exon 5 of 6) 2089 NM_001357628 19896 Mm.336955 NM_011287 ENSMUSG00000037805 Rpl10a CsA-19|Nedd6 ribosomal protein L10A protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-11 chr2 174331804 174332057 + 0.386243247519795 NA intron (NM_201616, intron 1 of 11) intron (NM_201616, intron 1 of 11) 1841 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-11 chr4 133633625 133633834 + 0.386243247519795 NA promoter-TSS (NM_001017968) promoter-TSS (NM_001017968) -300 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-24 chr5 90608612 90608885 + 0.386243247519795 NA intron (NM_001310656, intron 6 of 10) intron (NM_001310656, intron 6 of 10) 31779 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-4 chr1 182057812 182058061 + 0.386243247519795 NA Intergenic Intergenic -37956 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-4 chr10 77143286 77143750 + 0.386243247519795 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 23012 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-12 chr14 62880566 62880924 + 0.386243247519795 NA intron (NM_175546, intron 1 of 11) intron (NM_175546, intron 1 of 11) 15203 NR_105860 102465311 NR_105860 ENSMUSG00000098858 Mir6541 Gm27311|mmu-mir-6541 microRNA 6541 ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-21 chr2 180032506 180032750 + 0.386243247519795 NA exon (NM_177727, exon 7 of 9) exon (NM_177727, exon 7 of 9) 7641 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-34 chr6 108234991 108235188 + 0.386243247519795 NA intron (NM_010585, intron 2 of 61) ID4|SINE|ID 21993 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding unique_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795 chr11 88289274 88289523 + 0.386243247519795 NA Intergenic Intergenic -4645 NM_028859 74297 Mm.207320 NM_028859 ENSMUSG00000034031 Ccdc182 1700106J16Rik coiled-coil domain containing 182 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-7 chr16 10451866 10452142 + 0.386243247519795 NA Intergenic Intergenic -4642 NM_001013778 383103 Mm.325732 NM_001013778 ENSMUSG00000050908 Tvp23a Fam18a trans-golgi network vesicle protein 23A protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-10 chr2 153443723 153443958 + 0.386243247519795 NA intron (NM_001134300, intron 4 of 10) CpG 639 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-2 chr11 76285954 76286284 + 0.386243247519795 NA intron (NM_008750, intron 1 of 7) B4A|SINE|B4 42383 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-17 chr8 84389130 84389368 + 0.386243247519795 NA Intergenic Intergenic -26115 NM_001252060 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-15 chr16 32674310 32674641 + 0.386243247519795 NA intron (NM_001289443, intron 1 of 5) intron (NM_001289443, intron 1 of 5) 1321 NM_001289443 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-10 chr13 5348332 5348824 + 0.386243247519795 NA Intergenic Intergenic 509514 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-20 chr2 93214758 93215000 + 0.386243247519795 NA intron (NM_183180, intron 5 of 9) intron (NM_183180, intron 5 of 9) 27331 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-31 chr5 92937800 92938086 + 0.386243247519795 NA intron (NM_001077596, intron 3 of 9) intron (NM_001077596, intron 3 of 9) 39950 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795 chr1 133694050 133694295 + 0.386243247519795 NA Intergenic Intergenic -4064 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-6 chr15 64532085 64532309 + 0.386243247519795 NA Intergenic Intergenic -149278 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-7 chr11 18585741 18586064 + 0.386243247519795 NA Intergenic Intergenic 433067 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-6 chr4 136431881 136432119 + 0.386243247519795 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 7388 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-13 chr7 112454273 112454515 + 0.386243247519795 NA intron (NM_020606, intron 1 of 12) MIRc|SINE|MIR 26688 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-25 chr3 96250877 96251069 + 0.386243247519795 NA Intergenic Intergenic 4273 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-4 chr10 95124148 95124411 + 0.386243247519795 NA intron (NR_131146, intron 3 of 3) ID4_|SINE|ID 21546 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-13 chr13 113509715 113509923 + 0.386243247519795 NA Intergenic Intergenic -6975 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-26 chr5 93101712 93102028 + 0.386243247519795 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 8454 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-40 chr9 67156690 67156889 + 0.386243247519795 NA intron (NR_045748, intron 1 of 2) intron (NR_045748, intron 1 of 2) 23228 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-9 chr9 62106937 62107178 + 0.386243247519795 NA Intergenic Intergenic 15537 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795 chr1 60409698 60409934 + 0.386243247519795 NA exon (NM_001198571, exon 1 of 11) exon (NM_001198571, exon 1 of 11) 197 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-28 chr4 135253790 135254122 + 0.386243247519795 NA intron (NM_013885, intron 1 of 5) intron (NM_013885, intron 1 of 5) 18804 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-8 chr4 53405024 53405266 + 0.386243247519795 NA Intergenic Intergenic -35268 NM_001159633 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-5 chr16 34528753 34528981 + 0.386243247519795 NA Intergenic Intergenic -14840 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-13 chr5 38209577 38209791 + 0.386243247519795 NA intron (NR_153116, intron 2 of 5) intron (NR_153116, intron 2 of 5) 10770 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-14 chr16 18788544 18788767 + 0.386243247519795 NA intron (NM_001358206, intron 13 of 18) intron (NM_001358206, intron 13 of 18) 11808 NM_013805 12741 Mm.22768 NM_013805 ENSMUSG00000041378 Cldn5 AI854493|MBEC1|Tmvcf claudin 5 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-19 chr2 120130124 120130405 + 0.386243247519795 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 24311 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding unique_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-6 chr8 82251529 82251751 + 0.386243247519795 NA Intergenic Intergenic 150946 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-5 chr13 23575958 23576243 + 0.386243247519795 NA exon (NM_178204, exon 1 of 1) exon (NM_178204, exon 1 of 1) 337 NM_178204 319149 Mm.347699 NM_178204 ENSMUSG00000099583 Hist1h3d H3-b histone cluster 1, H3d protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-36 chr7 27356350 27356557 + 0.386243247519795 NA promoter-TSS (NM_138676) promoter-TSS (NM_138676) -445 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding unique_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-4 chr9 59656106 59656306 + 0.386243247519795 NA promoter-TSS (NM_011099) promoter-TSS (NM_011099) -162 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795 chr1 91079037 91079315 + 0.386243247519795 NA intron (NM_008515, intron 6 of 22) intron (NM_008515, intron 6 of 22) 25732 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-2 chr1 36129276 36129598 + 0.386243247519795 NA Intergenic Intergenic 14876 NR_105862 102465540 NR_105862 ENSMUSG00000098752 Mir6897 Gm27652|mmu-mir-6897 microRNA 6897 ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-27 chr4 128958780 128959008 + 0.386243247519795 NA intron (NM_001301841, intron 2 of 8) intron (NM_001301841, intron 2 of 8) 3561 NM_172875 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-19 chr19 47415334 47415558 + 0.386243247519795 NA intron (NM_008018, intron 2 of 14) intron (NM_008018, intron 2 of 14) 48965 NM_001164717 14218 Mm.127560 NM_008018 ENSMUSG00000053617 Sh3pxd2a 2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5 SH3 and PX domains 2A protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-12 chr13 64402086 64402364 + 0.386243247519795 NA Intergenic Intergenic -30328 NM_053180 105278 Mm.74982 NM_053180 ENSMUSG00000021483 Cdk20 4932702G04Rik|AU019450|AW558027|CDCH|Ccrk|PNQLARE|p42 cyclin-dependent kinase 20 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-2 chr1 150100924 150101143 + 0.386243247519795 NA exon (NM_011198, exon 2 of 10) exon (NM_011198, exon 2 of 10) 1002 NM_011198 19225 Mm.292547 NM_011198 ENSMUSG00000032487 Ptgs2 COX2|Cox-2|PES-2|PGHS-2|PHS II|PHS-2|Pghs2|TIS10|gripghs prostaglandin-endoperoxide synthase 2 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-12 chr6 91647864 91648170 + 0.386243247519795 NA Intergenic Intergenic -36050 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-9 chr2 30996147 30996365 + 0.386243247519795 NA intron (NM_028846, intron 2 of 24) intron (NM_028846, intron 2 of 24) 13977 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-5 chr4 107554810 107555015 + 0.386243247519795 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 120193 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-23 chr4 143296062 143296387 + 0.386243247519795 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 3340 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-19 chr9 49814669 49814862 + 0.386243247519795 NA Intergenic Intergenic -15372 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-16 chr15 66864828 66865019 + 0.386243247519795 NA Intergenic Intergenic -26470 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795 chr1 74505143 74505367 + 0.386243247519795 NA promoter-TSS (NM_021383) promoter-TSS (NM_021383) 566 NM_001310662 319651 Mm.66568 NM_176972 ENSMUSG00000033364 Usp37 4932415L06Rik|C330008N13Rik ubiquitin specific peptidase 37 protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-3 chr1 71756059 71756413 + 0.386243247519795 NA Intergenic Intergenic 102901 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-22 chr4 141305569 141305841 + 0.386243247519795 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 4484 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-8 chr18 60895527 60895754 + 0.386243247519795 NA Intergenic Intergenic -16600 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-2 chr10 4075169 4075394 + 0.386243247519795 NA intron (NM_001170785, intron 20 of 27) intron (NM_001170785, intron 20 of 27) 102206 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-16 chr7 112238124 112238431 + 0.386243247519795 NA intron (NM_001193305, intron 2 of 25) intron (NM_001193305, intron 2 of 25) 12441 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-8 chr11 101087416 101087620 + 0.386243247519795 NA TTS (NM_001305982) TTS (NM_001305982) 228 NM_001159384 21428 Mm.628 NM_011550 ENSMUSG00000017801 Mlx Tcfl4|Tf4|bHLHd13 MAX-like protein X protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-30 chr5 74160306 74160515 + 0.386243247519795 NA Intergenic Intergenic -34916 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-2 chr7 49523121 49523353 + 0.386243247519795 NA intron (NM_175272, intron 11 of 37) intron (NM_175272, intron 11 of 37) 113598 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795 chr11 104624026 104624218 + 0.386243247519795 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 16122 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-3 chr11 49246579 49246769 + 0.386243247519795 NA promoter-TSS (NM_001110149) promoter-TSS (NM_001110149) -803 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-39 chr7 139213522 139213759 + 0.386243247519795 NA promoter-TSS (NM_001162540) promoter-TSS (NM_001162540) -333 NM_001162540 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-13 chr15 61454483 61454688 + 0.386243247519795 NA Intergenic Intergenic 319866 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-22 chr3 9514093 9514500 + 0.386243247519795 NA intron (NM_133218, intron 2 of 8) AT_rich|Low_complexity|Low_complexity 95789 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-33 chr5 125388142 125388463 + 0.386243247519795 NA intron (NM_019639, intron 1 of 1) intron (NM_019639, intron 1 of 1) 1715 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-15 chr14 33358579 33358771 + 0.386243247519795 NA intron (NM_153800, intron 5 of 10) intron (NM_153800, intron 5 of 10) 52349 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-3 chr10 68274906 68275148 + 0.386243247519795 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 3699 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_15_10_0.270608425580499_3.59473583142755_0.386243247519795-4 chr3 119747786 119748053 + 0.386243247519795 NA exon (NM_019550, exon 6 of 14) exon (NM_019550, exon 6 of 14) 35469 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak1_15_10_0.270608425580499_3.59473583142755_0.386243247519795-15 chr5 138623161 138623660 + 0.386243247519795 NA intron (NM_183025, intron 1 of 3) intron (NM_183025, intron 1 of 3) 551 NM_183025 243308 Mm.36612 NM_183025 ENSMUSG00000056014 A430033K04Rik C86988 RIKEN cDNA A430033K04 gene protein-coding common_peak1_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-4 chr15 75268188 75268447 + 0.386243247519795 NA promoter-TSS (NM_008530) promoter-TSS (NM_008530) -104 NM_008530 17071 Mm.377095 NM_008530 ENSMUSG00000022583 Ly6f - lymphocyte antigen 6 complex, locus F protein-coding unique_peak2_11_13_-0.489424296039109_3.56264277403805_0.386243247519795-9 chr12 108676136 108676609 + 0.386243247519795 NA intron (NM_001163396, intron 8 of 14) B2_Mm2|SINE|B2 17752 NR_029771 723909 NR_029771 ENSMUSG00000065436 Mir342 Mirn342|mmu-mir-342 microRNA 342 ncRNA common_peak1_71_66_-0.181432921358311_5.97537272977862_0.386196260304377-3 chr9 57439326 57439947 + 0.386196260304377 NA promoter-TSS (NM_001357913) promoter-TSS (NM_001357913) 100 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak2_71_66_-0.181432921358311_5.97537272977862_0.386196260304377 chr16 17922073 17922881 + 0.386196260304377 NA Intergenic Intergenic 5742 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak1_71_66_-0.181432921358311_5.97537272977862_0.386196260304377 chr5 124249710 124250351 + 0.386196260304377 NA promoter-TSS (NM_011256) promoter-TSS (NM_011256) -270 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding common_peak1_71_66_-0.181432921358311_5.97537272977862_0.386196260304377-2 chr5 134176109 134176817 + 0.386196260304377 NA exon (NM_033572, exon 1 of 11) exon (NM_033572, exon 1 of 11) 304 NM_033572 94254 Mm.29508 NM_033572 ENSMUSG00000061979 Rcc1l 5730496C04Rik|AU019812|Wbscr16 reculator of chromosome condensation 1 like protein-coding common_peak1_79_59_0.128696388216667_5.97123878971685_0.386196260304364-4 chr4 155173762 155174334 + 0.386196260304364 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 48487 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_79_59_0.128696388216667_5.97123878971685_0.386196260304364-2 chr15 89196166 89196542 + 0.386196260304364 NA exon (NM_027081, exon 1 of 20) exon (NM_027081, exon 1 of 20) 120 NM_027081 69440 Mm.482128 NM_027081 ENSMUSG00000015377 Dennd6b 1700027J05Rik|AI414881|Fam116b DENN/MADD domain containing 6B protein-coding common_peak1_80_59_0.146491857519095_5.98013652436807_0.386196260304364 chr1 171503080 171504098 + 0.386196260304364 NA 5' UTR (NM_019484, exon 1 of 1) 5' UTR (NM_019484, exon 1 of 1) 111 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding common_peak2_79_59_0.128696388216667_5.97123878971685_0.386196260304364 chr2 70824846 70825402 + 0.386196260304364 NA intron (NM_172664, intron 1 of 19) CpG 356 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding common_peak1_79_59_0.128696388216667_5.97123878971685_0.386196260304364-3 chr2 70824847 70825408 + 0.386196260304364 NA intron (NM_172664, intron 1 of 19) CpG 353 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding common_peak2_80_59_0.146491857519095_5.98013652436807_0.386196260304364-2 chr6 113740024 113740700 + 0.386196260304364 NA intron (NM_024206, intron 1 of 8) intron (NM_024206, intron 1 of 8) 319 NM_024206 110379 Mm.29296 NM_024206 ENSMUSG00000030298 Sec13 1110003H02Rik|Sec13l1|Sec13r SEC13 homolog, nuclear pore and COPII coat complex component protein-coding common_peak1_79_59_0.128696388216667_5.97123878971685_0.386196260304364 chr14 76780812 76781831 + 0.386196260304364 NA Intergenic Intergenic 21190 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_80_59_0.146491857519095_5.98013652436807_0.386196260304364 chr6 28260976 28261927 + 0.386196260304364 NA intron (NM_001081678, intron 1 of 5) CpG 150 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding common_peak1_80_59_0.146491857519095_5.98013652436807_0.386196260304364-2 chr10 84396449 84397042 + 0.386196260304364 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 43726 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_80_59_0.146491857519095_5.98013652436807_0.386196260304364-3 chr10 84917356 84917978 + 0.386196260304364 NA promoter-TSS (NM_183172) promoter-TSS (NM_183172) 54 NM_183172 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak2_79_59_0.128696388216667_5.97123878971685_0.386196260304364-2 chr6 124755480 124756492 + 0.386196260304364 NA intron (NM_007881, intron 1 of 9) intron (NM_007881, intron 1 of 9) 501 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_195_149_0.0904294937236854_7.27403343735772_0.386079731936961 chr1 172501217 172503036 + 0.386079731936961 NA intron (NM_178598, intron 1 of 4) intron (NM_178598, intron 1 of 4) 1880 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding common_peak1_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-4 chr4 109000719 109001333 + 0.386060992278541 NA exon (NM_001347169, exon 1 of 33) exon (NM_001347169, exon 1 of 33) 371 NM_146150 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak1_51_49_-0.225372994892855_5.5311696923283_0.386060992278541 chr11 70916879 70917735 + 0.386060992278541 NA intron (NM_019400, intron 8 of 17) intron (NM_019400, intron 8 of 17) 52666 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak2_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-5 chr9 32715448 32716271 + 0.386060992278541 NA intron (NM_001038642, intron 1 of 6) ID4|SINE|ID 19817 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_51_49_-0.225372994892855_5.5311696923283_0.386060992278541 chr1 155083921 155084661 + 0.386060992278541 NA Intergenic Intergenic -1027 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak1_59_43_0.164045946988588_5.54145459213159_0.386060992278541-3 chr18 33666171 33667071 + 0.386060992278541 NA Intergenic Intergenic -128271 NR_038152 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA common_peak2_59_43_0.164045946988588_5.54145459213159_0.386060992278541 chr2 152820027 152820549 + 0.386060992278541 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 8201 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-3 chr3 142530125 142530702 + 0.386060992278541 NA promoter-TSS (NM_001083312) promoter-TSS (NM_001083312) 77 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-4 chr8 90907734 90908382 + 0.386060992278541 NA intron (NM_177224, intron 2 of 39) CpG -24191 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_59_43_0.164045946988588_5.54145459213159_0.386060992278541-4 chr5 86171931 86172734 + 0.386060992278541 NA intron (NM_172712, intron 1 of 32) intron (NM_172712, intron 1 of 32) 411 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak1_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-2 chr11 72796251 72796770 + 0.386060992278541 NA promoter-TSS (NM_001024926) promoter-TSS (NM_001024926) 284 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak1_59_43_0.164045946988588_5.54145459213159_0.386060992278541-2 chr17 46274553 46275541 + 0.386060992278541 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 7979 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak2_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-2 chr2 92007212 92007895 + 0.386060992278541 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 16617 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak1_51_49_-0.225372994892855_5.5311696923283_0.386060992278541-3 chr15 27937428 27937973 + 0.386060992278541 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 88148 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_59_43_0.164045946988588_5.54145459213159_0.386060992278541-2 chr4 88799486 88800050 + 0.386060992278541 NA promoter-TSS (NM_001161609).8 promoter-TSS (NM_001161609).8 193 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 - predicted gene 13275 protein-coding common_peak1_59_43_0.164045946988588_5.54145459213159_0.386060992278541-5 chrX 140664739 140665581 + 0.386060992278541 NA 5' UTR (NM_001358366, exon 1 of 10) 5' UTR (NM_001358366, exon 1 of 10) 204 NM_001358366 23947 Mm.131097 NM_011845 ENSMUSG00000000266 Mid2 FXY2|Trim1 midline 2 protein-coding common_peak1_59_43_0.164045946988588_5.54145459213159_0.386060992278541 chr10 3973418 3974182 + 0.386060992278541 NA intron (NM_001170785, intron 1 of 27) CpG 725 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak1_120_108_-0.139873563800601_6.69824754287663_0.386027446274199 chr17 79614744 79615720 + 0.386027446274199 NA intron (NM_201361, intron 1 of 10) CpG 332 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak2_94_86_-0.161178122122947_6.36235443478725_0.38580402153869 chr17 65782246 65783151 + 0.38580402153869 NA promoter-TSS (NR_104465) promoter-TSS (NR_104465) -657 NR_152099 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_94_86_-0.161178122122947_6.36235443478725_0.38580402153869-2 chr19 24476599 24477413 + 0.38580402153869 NA exon (NM_026520, exon 1 of 1) exon (NM_026520, exon 1 of 1) 468 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|Gm9849 family with sequence similarity 122, member A protein-coding common_peak2_104_78_0.121355867022912_6.36445868168856_0.38580402153869 chr3 53200748 53201719 + 0.38580402153869 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 159686 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_104_78_0.121355867022912_6.36445868168856_0.38580402153869-2 chr4 108779878 108780673 + 0.38580402153869 NA intron (NM_001347163, intron 1 of 18) CpG 813 NM_001347163 230597 Mm.196776 NM_183300 ENSMUSG00000034557 Zfyve9 Madhip|NSP|SARA|SMADIP zinc finger, FYVE domain containing 9 protein-coding common_peak1_94_86_-0.161178122122947_6.36235443478725_0.38580402153869 chr11 86650021 86650909 + 0.38580402153869 NA intron (NM_001356531, intron 5 of 11) (CA)n|Simple_repeat|Simple_repeat 20810 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak2_257_223_-0.0943867487672057_7.760161547674_0.38579535102357 chr9 102759040 102762668 + 0.38579535102357 NA Intergenic IMPB_01|Satellite|Satellite 21206 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_151_134_-0.121762101652172_7.01593454622475_0.385216679459145 chr7 78895973 78897086 + 0.385216679459145 NA intron (NM_001360709, intron 1 of 3) intron (NM_001360709, intron 1 of 3) 471 NM_001360709 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding common_peak1_163_124_0.098120303365107_7.01484443634464_0.385216679459145 chr6 52219912 52221725 + 0.385216679459145 NA Intergenic Intergenic -2245 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak2_133_100_0.116286555315349_6.71635476040947_0.385213567753735 chr1 86434640 86435969 + 0.385213567753735 NA Intergenic Intergenic 8975 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak2_81_60_0.140222230037551_6.00084845258166_0.384853687557072-3 chr4 133756436 133757442 + 0.384853687557072 NA Intergenic CpG -3328 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_81_60_0.140222230037551_6.00084845258166_0.384853687557072 chr11 85311460 85312326 + 0.384853687557072 NA exon (NM_016910, exon 1 of 6) exon (NM_016910, exon 1 of 6) 639 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak2_81_60_0.140222230037551_6.00084845258166_0.384853687557072 chr18 34777049 34777576 + 0.384853687557072 NA exon (NM_001081256, exon 1 of 24) exon (NM_001081256, exon 1 of 24) 304 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak2_81_60_0.140222230037551_6.00084845258166_0.384853687557072-2 chr2 148877616 148878602 + 0.384853687557072 NA Intergenic Intergenic -2597 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_81_60_0.140222230037551_6.00084845258166_0.384853687557072-3 chrX 73476875 73477838 + 0.384853687557072 NA Intergenic Intergenic -6245 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak1_81_60_0.140222230037551_6.00084845258166_0.384853687557072-2 chr8 120224474 120225489 + 0.384853687557072 NA intron (NR_110496, intron 1 of 2) intron (NR_110496, intron 1 of 2) 3249 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_72_67_-0.183047405684412_5.99593913840813_0.38485368755706-2 chr6 52222255 52223427 + 0.38485368755706 NA TTS (NM_010456) TTS (NM_010456) -4268 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak1_72_67_-0.183047405684412_5.99593913840813_0.38485368755706 chr5 135933960 135934520 + 0.38485368755706 NA intron (NM_018871, intron 1 of 1) CpG 401 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_72_67_-0.183047405684412_5.99593913840813_0.38485368755706-2 chr8 107031266 107031969 + 0.38485368755706 NA intron (NM_126165, intron 1 of 10) CpG 291 NM_126165 116733 Mm.236004 NM_126165 ENSMUSG00000031913 Vps4a 4930589C15Rik|AI325971|AW553189 vacuolar protein sorting 4A protein-coding common_peak2_72_67_-0.183047405684412_5.99593913840813_0.38485368755706-3 chr9 57708537 57709389 + 0.38485368755706 NA intron (NM_153799, intron 1 of 6) CpG 394 NM_153799 353190 Mm.268104 NM_153799 ENSMUSG00000038957 Edc3 AA517853|Lsm16|Yjdc enhancer of mRNA decapping 3 protein-coding common_peak2_72_67_-0.183047405684412_5.99593913840813_0.38485368755706 chr19 46483756 46484959 + 0.38485368755706 NA intron (NM_001025391, intron 11 of 11) intron (NM_001025391, intron 11 of 11) -17291 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_95_87_-0.162665931338535_6.37809865296803_0.384781851000355-2 chr2 30445674 30446447 + 0.384781851000355 NA intron (NM_138748, intron 9 of 9) intron (NM_138748, intron 9 of 9) 28139 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_105_79_0.116786980809254_6.38032158529199_0.384781851000355-2 chr5 93265450 93266580 + 0.384781851000355 NA Intergenic Intergenic -1558 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_96_87_-0.147821064226219_6.38552108652419_0.384781851000355 chr7 127511942 127512796 + 0.384781851000355 NA non-coding (NR_024331, exon 1 of 1) non-coding (NR_024331, exon 1 of 1) 386 NM_001304266 100043597 Mm.428042 NM_175144 ENSMUSG00000053877 Srcap B930091H02Rik|D030022P06Rik|F630004O05Rik Snf2-related CREBBP activator protein protein-coding common_peak2_105_79_0.116786980809254_6.38032158529199_0.384781851000355 chr4 127021365 127022356 + 0.384781851000355 NA non-coding (NR_045010, exon 1 of 12) non-coding (NR_045010, exon 1 of 12) 559 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak2_96_87_-0.147821064226219_6.38552108652419_0.384781851000355 chr1 185363088 185363714 + 0.384781851000355 NA intron (NM_001357474, intron 1 of 32) CpG 357 NM_001357474 107508 Mm.154511 NM_029735 ENSMUSG00000026615 Eprs 2410081F06Rik|3010002K18Rik|C79379|Qprs glutamyl-prolyl-tRNA synthetase protein-coding common_peak1_95_87_-0.162665931338535_6.37809865296803_0.384781851000355-2 chr2 34802399 34803068 + 0.384781851000355 NA Intergenic CpG -2821 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak1_95_87_-0.162665931338535_6.37809865296803_0.384781851000355 chr19 38027890 38028992 + 0.384781851000355 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 15136 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_105_79_0.116786980809254_6.38032158529199_0.384781851000355 chr4 40970415 40971701 + 0.384781851000355 NA exon (NM_001290449, exon 1 of 16) exon (NM_001290449, exon 1 of 16) 115 NM_023739 74164 Mm.247456 NM_023739 ENSMUSG00000028423 Nfx1 1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding common_peak2_95_87_-0.162665931338535_6.37809865296803_0.384781851000355 chr19 8898105 8898747 + 0.384781851000355 NA TTS (NM_176843) TTS (NM_176843) 369 NM_008060 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-3 chr1 190911412 190912063 + 0.384630725886669 NA promoter-TSS (NM_178775) promoter-TSS (NM_178775) 33 NM_178775 320119 Mm.220912 NM_178775 ENSMUSG00000089872 Rps6kc1 AA682037|B130003F20Rik|C80612|Rpk118 ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-7 chr4 130001281 130001629 + 0.384630725886669 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 9401 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak2_42_30_0.192046219822557_5.05021942029815_0.384630725886669-2 chr16 14351107 14351681 + 0.384630725886669 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -10164 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-3 chr11 32643558 32643983 + 0.384630725886669 NA intron (NM_001271349, intron 1 of 11) intron (NM_001271349, intron 1 of 11) 1215 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-8 chr19 43689876 43690271 + 0.384630725886669 NA intron (NM_053103, intron 1 of 12) CpG 384 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-8 chr17 66749644 66750091 + 0.384630725886669 NA intron (NM_001357625, intron 20 of 32) MER2|DNA|TcMar-Tigger 35411 NR_151453 102639882 Mm.443262 NR_151453 1700016K05Rik - RIKEN cDNA 1700016K05 gene ncRNA unique_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669 chr5 64807792 64808376 + 0.384630725886669 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 4561 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-6 chr4 54865734 54866091 + 0.384630725886669 NA Intergenic Intergenic -82033 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-9 chr17 73942193 73942812 + 0.384630725886669 NA intron (NM_011723, intron 2 of 35) intron (NM_011723, intron 2 of 35) 7694 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-10 chr4 88760244 88760584 + 0.384630725886669 NA promoter-TSS (NM_001085531) promoter-TSS (NM_001085531) -360 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645 predicted gene 13283 protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-9 chr7 99381707 99382196 + 0.384630725886669 NA 5' UTR (NM_001362166, exon 1 of 19) 5' UTR (NM_001362166, exon 1 of 19) 433 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak2_42_30_0.192046219822557_5.05021942029815_0.384630725886669-6 chr8 90795836 90796417 + 0.384630725886669 NA Intergenic Intergenic -32709 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-2 chr11 54955752 54956105 + 0.384630725886669 NA intron (NM_001271456, intron 1 of 18) CpG 7012 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-2 chr5 105794700 105795581 + 0.384630725886669 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -81428 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-6 chr15 51798515 51798791 + 0.384630725886669 NA intron (NM_080635, intron 3 of 7) intron (NM_080635, intron 3 of 7) 66808 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-6 chr11 86919886 86920679 + 0.384630725886669 NA Intergenic Intergenic 73480 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-2 chr10 81606397 81606825 + 0.384630725886669 NA intron (NR_030677, intron 1 of 2) intron (NR_030677, intron 1 of 2) 303 NR_030677 268319 Mm.131825 NM_001033363 ENSMUSG00000074862 BC025920 - zinc finger protein pseudogene pseudo common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-4 chr12 79601734 79602316 + 0.384630725886669 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 304674 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_42_30_0.192046219822557_5.05021942029815_0.384630725886669-5 chr8 70752428 70753056 + 0.384630725886669 NA Intergenic Intergenic -1937 NM_001328047 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak2_42_30_0.192046219822557_5.05021942029815_0.384630725886669 chr11 51763790 51764187 + 0.384630725886669 NA intron (NM_025535, intron 1 of 6) intron (NM_025535, intron 1 of 6) 325 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-5 chr15 33591031 33591819 + 0.384630725886669 NA intron (NM_176073, intron 7 of 7) intron (NM_176073, intron 7 of 7) 62011 NR_045070 75880 Mm.396109 NR_045070 ENSMUSG00000115779 4930592A05Rik - RIKEN cDNA 4930592A05 gene ncRNA common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-5 chr18 36744734 36745125 + 0.384630725886669 NA promoter-TSS (NM_010885) promoter-TSS (NM_010885) 273 NM_011879 24010 Mm.30234 NM_011879 ENSMUSG00000024474 Ik MuRED IK cytokine protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-10 chr9 118606731 118607432 + 0.384630725886669 NA exon (NM_133721, exon 1 of 28) exon (NM_133721, exon 1 of 28) 372 NM_133721 104099 Mm.335520 NM_133721 ENSMUSG00000039115 Itga9 (alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e integrin alpha 9 protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-7 chr17 88530253 88530643 + 0.384630725886669 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 324 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-4 chr17 7168946 7169660 + 0.384630725886669 NA promoter-TSS (NM_011299) promoter-TSS (NM_011299) -812 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-4 chr10 58323603 58323936 + 0.384630725886669 NA intron (NM_026148, intron 1 of 9) CpG 222 NM_026148 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-3 chr11 74829847 74830309 + 0.384630725886669 NA promoter-TSS (NM_010813) promoter-TSS (NM_010813) -846 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-11 chr8 3420474 3420878 + 0.384630725886669 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 27668 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669 chr1 162463185 162463861 + 0.384630725886669 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 14511 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669-7 chr15 79414768 79415340 + 0.384630725886669 NA Intergenic Intergenic -11751 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_42_30_0.192046219822557_5.05021942029815_0.384630725886669 chr1 131126228 131126578 + 0.384630725886669 NA Intergenic Intergenic 11831 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-9 chr7 55794174 55794602 + 0.384630725886669 NA intron (NM_001360873, intron 1 of 21) CpG 263 NM_001360873 233276 Mm.284306 NM_146190 ENSMUSG00000033790 Tubgcp5 B130010C12Rik|GCP5|mKIAA1899 tubulin, gamma complex associated protein 5 protein-coding unique_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669 chr10 61452130 61452635 + 0.384630725886669 NA intron (NM_010124, intron 1 of 2) CpG 287 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-2 chr1 164249117 164249513 + 0.384630725886669 NA exon (NM_054087, exon 1 of 6) exon (NM_054087, exon 1 of 6) 269 NM_054087 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA|ThTr-1 solute carrier family 19 (thiamine transporter), member 2 protein-coding common_peak2_42_30_0.192046219822557_5.05021942029815_0.384630725886669-4 chr5 115568540 115569357 + 0.384630725886669 NA intron (NM_172719, intron 1 of 57) intron (NM_172719, intron 1 of 57) 3685 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak1_41_30_0.158338385632505_5.03336550320313_0.384630725886669-8 chr4 133011855 133012462 + 0.384630725886669 NA intron (NM_146155, intron 1 of 6) CpG 652 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669 chr1 131244798 131245394 + 0.384630725886669 NA promoter-TSS (NM_001313731) promoter-TSS (NM_001313731) 82 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_42_30_0.192046219822557_5.05021942029815_0.384630725886669-3 chr4 89294946 89295213 + 0.384630725886669 NA promoter-TSS (NM_009877) promoter-TSS (NM_009877) -101 NR_132431 102633081 Mm.409388 NR_132431 Gm12610 ANRIL|Gm12609 predicted gene 12610 ncRNA common_peak2_41_30_0.158338385632505_5.03336550320313_0.384630725886669-5 chr11 54955734 54956107 + 0.384630725886669 NA intron (NM_001271456, intron 1 of 18) CpG 7020 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-10 chr7 99519419 99520023 + 0.384630725886657 NA Intergenic Intergenic -15765 NM_178220 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-2 chr12 17040085 17040674 + 0.384630725886657 NA Intergenic Intergenic -28652 NM_001201333 73667 Mm.159048 NM_001201332 ENSMUSG00000071398 2410004P03Rik - RIKEN cDNA 2410004P03 gene protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-6 chr6 8259314 8259679 + 0.384630725886657 NA promoter-TSS (NM_026632) promoter-TSS (NM_026632) 208 NM_001302353 100036521 Mm.446106 NM_001302353 ENSMUSG00000089862 Umad1 Gm16039 UMAP1-MVP12 associated (UMA) domain containing 1 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-9 chr7 68025676 68026222 + 0.384630725886657 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 73692 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657 chr15 81810510 81810798 + 0.384630725886657 NA promoter-TSS (NM_017376) promoter-TSS (NM_017376) -760 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657 chr1 64533458 64533739 + 0.384630725886657 NA intron (NM_001037726, intron 1 of 6) CpG 794 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-4 chr5 138170404 138171124 + 0.384630725886657 NA intron (NM_008568, intron 1 of 14) intron (NM_008568, intron 1 of 14) 502 NM_001356577 17220 Mm.378965 NM_008568 ENSMUSG00000029730 Mcm7 AI747533|Mcmd7|mCDC47 minichromosome maintenance complex component 7 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-12 chr9 55208922 55209317 + 0.384630725886657 NA exon (NM_028049, exon 1 of 7) exon (NM_028049, exon 1 of 7) 184 NM_028049 71999 Mm.276429 NM_028049 ENSMUSG00000032309 Fbxo22 0610033L19Rik|1600016C16Rik F-box protein 22 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-5 chr5 146676831 146677388 + 0.384630725886657 NA Intergenic (CACCC)n|Simple_repeat|Simple_repeat -91870 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding unique_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-2 chr3 121376107 121376737 + 0.384630725886657 NA Intergenic Intergenic -50119 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-5 chr7 28356887 28357533 + 0.384630725886657 NA Intergenic Intergenic 5670 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-6 chr9 108508084 108508444 + 0.384630725886657 NA intron (NM_133794, intron 1 of 23) intron (NM_133794, intron 1 of 23) 259 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding common_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-2 chr17 87312576 87313114 + 0.384630725886657 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 29959 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-7 chr6 100825457 100826164 + 0.384630725886657 NA Intergenic Intergenic -7828 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-11 chr8 25276140 25276513 + 0.384630725886657 NA Intergenic Intergenic 29944 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA unique_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657 chr10 77211546 77211836 + 0.384630725886657 NA Intergenic Intergenic -45161 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-3 chr3 145885583 145885804 + 0.384630725886657 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -38569 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding unique_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657 chr12 110850149 110850810 + 0.384630725886657 NA exon (NM_001199785, exon 1 of 7) exon (NM_001199785, exon 1 of 7) 200 NM_028365 72805 Mm.443524 NM_028365 ENSMUSG00000021271 Zfp839 2810455K09Rik zinc finger protein 839 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-8 chr7 34806294 34807033 + 0.384630725886657 NA intron (NM_175140, intron 1 of 3) intron (NM_175140, intron 1 of 3) 6048 NM_175140 68947 Mm.29380 NM_175140 ENSMUSG00000060402 Chst8 1500011J21Rik|AI426009 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-13 chr9 108264115 108264482 + 0.384630725886657 NA promoter-TSS (NM_001276481) promoter-TSS (NM_001276481) -340 NM_001276485 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-3 chr14 13960794 13961114 + 0.384630725886657 NA intron (NM_001359900, intron 1 of 8) CpG 359 NM_001285780 66231 Mm.295875 NM_025435 ENSMUSG00000053453 Thoc7 Nif3l1bp1 THO complex 7 protein-coding common_peak2_35_35_-0.278213752769608_5.03081812505751_0.384630725886657-4 chr5 135544541 135545103 + 0.384630725886657 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 300 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_152_135_-0.123015759032222_7.02595496173423_0.384568768719337 chr13 110395169 110396574 + 0.384568768719337 NA intron (NM_152804, intron 1 of 13) intron (NM_152804, intron 1 of 13) 827 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak2_152_135_-0.123015759032222_7.02595496173423_0.384568768719337-2 chr8 82773715 82774664 + 0.384568768719337 NA promoter-TSS (NM_145600) promoter-TSS (NM_145600) -63 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak1_134_101_0.112723428109299_6.72878705602614_0.384415132402501-3 chr9 63702175 63703623 + 0.384415132402501 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 55095 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_134_101_0.112723428109299_6.72878705602614_0.384415132402501 chr8 70302001 70303238 + 0.384415132402501 NA promoter-TSS (NM_021538) promoter-TSS (NM_021538) -166 NM_021538 59042 Mm.28668 NM_021538 ENSMUSG00000055681 Cope 1110005D17Rik|Cope1 coatomer protein complex, subunit epsilon protein-coding common_peak1_134_101_0.112723428109299_6.72878705602614_0.384415132402501-2 chr8 83715210 83716226 + 0.384415132402501 NA intron (NM_197982, intron 1 of 10) CpG 541 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak2_122_110_-0.142620696522213_6.723105518089_0.384415132402477 chr17 26252702 26253812 + 0.384415132402477 NA intron (NM_028190, intron 1 of 9) CpG 347 NR_037905 66978 Mm.440216 NM_025881 ENSMUSG00000024188 Luc7l 1810045C04Rik|2410018D03Rik Luc7-like protein-coding common_peak2_123_110_-0.131021306370569_6.72890521316482_0.384415132402477 chr2 127247950 127248913 + 0.384415132402477 NA promoter-TSS (NM_025296) promoter-TSS (NM_025296) 456 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding common_peak2_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-4 chr18 65581036 65581578 + 0.384249331899717 NA intron (NM_207255, intron 1 of 5) CpG 1077 NM_207255 328977 Mm.286232 NM_207255 ENSMUSG00000042439 Zfp532 C530030I18Rik|Znf532|mKIAA1629 zinc finger protein 532 protein-coding common_peak1_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-5 chr6 124414150 124414978 + 0.384249331899717 NA intron (NM_001360570, intron 1 of 14) intron (NM_001360570, intron 1 of 14) 299 NM_001277330 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1-BP|PTS1R|PXR1P|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding common_peak2_60_44_0.155302972973201_5.56950458281628_0.384249331899717 chr11 97309693 97310217 + 0.384249331899717 NA Intergenic Intergenic -5761 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-6 chr4 126261041 126261489 + 0.384249331899717 NA Intergenic Intergenic -1140 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-6 chr5 100846457 100846950 + 0.384249331899717 NA 5' UTR (NM_172715, exon 2 of 13) 5' UTR (NM_172715, exon 2 of 13) 474 NM_172715 231510 Mm.271911 NM_172715 ENSMUSG00000029314 Gpat3 1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|Agpat9|GPAT-3|mGPAT3 glycerol-3-phosphate acyltransferase 3 protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-3 chr14 55899696 55900162 + 0.384249331899717 NA intron (NM_001082975, intron 1 of 5) intron (NM_001082975, intron 1 of 5) 303 NM_001082975 654795 Mm.486218 NM_001082975 ENSMUSG00000022223 Sdr39u1 2310014G06Rik short chain dehydrogenase/reductase family 39U, member 1 protein-coding common_peak2_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-3 chr9 66918765 66919474 + 0.384249331899717 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 586 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_60_44_0.155302972973201_5.56950458281628_0.384249331899717-4 chr5 149052450 149053031 + 0.384249331899717 NA intron (NM_010439, intron 1 of 4) intron (NM_010439, intron 1 of 4) 317 NM_010439 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak2_60_44_0.155302972973201_5.56950458281628_0.384249331899717-5 chr8 111708569 111709431 + 0.384249331899717 NA Intergenic Intergenic -17990 NM_025583 66473 Mm.34374 NM_025583 ENSMUSG00000031957 Ctrb1 2200008D09Rik|AI504462|Ctrb|Prt-2 chymotrypsinogen B1 protein-coding common_peak1_60_44_0.155302972973201_5.56950458281628_0.384249331899717-5 chr6 108448637 108449269 + 0.384249331899717 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -40790 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-8 chr7 19715948 19716586 + 0.384249331899717 NA promoter-TSS (NM_016871) promoter-TSS (NM_016871) -838 NM_016871 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-4 chr17 26068726 26069428 + 0.384249331899717 NA promoter-TSS (NM_001162868) promoter-TSS (NM_001162868) 100 NM_001162868 215445 Mm.41191 NM_153140 ENSMUSG00000037098 Rab11fip3 Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665 RAB11 family interacting protein 3 (class II) protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717 chr13 52079214 52079878 + 0.384249331899717 NA Intergenic Intergenic -17195 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_60_44_0.155302972973201_5.56950458281628_0.384249331899717-3 chr2 25500867 25501399 + 0.384249331899717 NA promoter-TSS (NM_027062) promoter-TSS (NM_027062) 383 NM_013908 30839 Mm.29170 NM_013908 ENSMUSG00000015095 Fbxw5 AI159739|Fbw5 F-box and WD-40 domain protein 5 protein-coding common_peak1_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-2 chr12 111945287 111946189 + 0.384249331899717 NA Intergenic Intergenic -1256 NR_029464 77675 Mm.98331 NR_029464 ENSMUSG00000113769 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak2_60_44_0.155302972973201_5.56950458281628_0.384249331899717-2 chr2 18027848 18028319 + 0.384249331899717 NA non-coding (NR_028376, exon 2 of 2) non-coding (NR_028376, exon 2 of 2) 834 NR_028378 100034739 Mm.401643 NR_028378 Gm17762 - predicted gene, 17762 ncRNA common_peak1_60_44_0.155302972973201_5.56950458281628_0.384249331899717 chr10 17721528 17722278 + 0.384249331899717 NA Intergenic Intergenic -1325 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_60_44_0.155302972973201_5.56950458281628_0.384249331899717-4 chr2 71055748 71056479 + 0.384249331899717 NA promoter-TSS (NM_145524) promoter-TSS (NM_145524) 369 NM_001165980 75763 Mm.281668 NM_198005 ENSMUSG00000041966 Dcaf17 2810055O12Rik|4833418A01Rik|A030004A10Rik|A930009G19Rik|AI448937 DDB1 and CUL4 associated factor 17 protein-coding common_peak2_53_50_-0.199878491071336_5.57248609643583_0.384249331899717 chr11 70000684 70001410 + 0.384249331899717 NA intron (NM_007888, intron 1 of 14) intron (NM_007888, intron 1 of 14) 421 NM_007888 13543 Mm.5114 NM_007888 ENSMUSG00000020888 Dvl2 - dishevelled segment polarity protein 2 protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-2 chr13 104460668 104461322 + 0.384249331899717 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 173160 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_60_44_0.155302972973201_5.56950458281628_0.384249331899717-3 chr12 108309893 108310536 + 0.384249331899717 NA intron (NM_001044380, intron 1 of 8) intron (NM_001044380, intron 1 of 8) 3944 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak1_60_44_0.155302972973201_5.56950458281628_0.384249331899717-2 chr12 82169622 82170217 + 0.384249331899717 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) -97 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-3 chr17 73107909 73108475 + 0.384249331899717 NA intron (NM_001081071, intron 1 of 5) CpG 207 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak1_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-4 chr6 70812682 70813126 + 0.384249331899717 NA Intergenic Intergenic -20729 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-7 chr6 113442617 113443081 + 0.384249331899717 NA intron (NM_001243739, intron 1 of 1) CpG 280 NM_001243739 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding common_peak2_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-2 chr17 27634644 27635193 + 0.384249331899717 NA intron (NM_025963, intron 1 of 5) CpG 324 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding common_peak1_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-3 chr5 130171996 130172503 + 0.384249331899717 NA intron (NM_001359233, intron 1 of 7) CpG 430 NM_001359233 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-2 chr15 62500463 62501058 + 0.384249331899717 NA Intergenic Intergenic -281309 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_52_50_-0.226655286701635_5.55909769862068_0.384249331899717 chr11 70451754 70452279 + 0.384249331899717 NA promoter-TSS (NM_025397) promoter-TSS (NM_025397) 85 NM_025397 66172 Mm.46424 NM_025397 ENSMUSG00000018923 Med11 1110030J09Rik|AI465144|AW545069 mediator complex subunit 11 protein-coding common_peak1_60_44_0.155302972973201_5.56950458281628_0.384249331899717-6 chr8 70488969 70489659 + 0.384249331899717 NA Intergenic PB1D7|SINE|Alu -1956 NM_182991 67937 Mm.23002 NM_182991 ENSMUSG00000035964 Tmem59l 5330410G16Rik transmembrane protein 59-like protein-coding common_peak2_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-5 chr3 103809532 103809935 + 0.384249331899717 NA promoter-TSS (NM_133865) promoter-TSS (NM_133865) 216 NM_026193 67489 Mm.197568 NM_026193 ENSMUSG00000032952 Ap4b1 1810038H16Rik|AV004952|Ap4b4 adaptor-related protein complex AP-4, beta 1 protein-coding common_peak1_52_50_-0.226655286701635_5.55909769862068_0.384249331899717-5 chr4 155178779 155179524 + 0.384249331899717 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 43384 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_53_50_-0.199878491071336_5.57248609643583_0.384249331899717 chr11 22859877 22860625 + 0.384249331899717 NA promoter-TSS (NM_001169114) promoter-TSS (NM_001169114) 85 NM_001169114 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_53_50_-0.199878491071336_5.57248609643583_0.384249331899717-6 chr9 58581477 58582033 + 0.384249331899717 NA promoter-TSS (NM_009145) promoter-TSS (NM_009145) -485 NM_001293673 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak1_223_194_-0.0967961586774182_7.5589322344109_0.384206892267855 chr10 67547936 67549927 + 0.384206892267855 NA promoter-TSS (NM_001005419) promoter-TSS (NM_001005419) 24 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_200_153_0.0885470995996975_7.31106009049475_0.383932493033948 chr15 84923382 84924500 + 0.383932493033948 NA intron (NM_016714, intron 1 of 7) CpG 513 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-5 chr2 117746173 117746427 + 0.383878263347744 NA Intergenic Intergenic 66502 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-9 chr15 73268104 73268333 + 0.383878263347744 NA intron (NM_001358046, intron 19 of 34) intron (NM_001358046, intron 19 of 34) -13336 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA unique_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744 chr2 73607555 73607932 + 0.383878263347744 NA intron (NR_040623, intron 1 of 3) intron (NR_040623, intron 1 of 3) 11217 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-23 chr9 27030226 27030531 + 0.383878263347744 NA promoter-TSS (NM_178027) promoter-TSS (NM_178027) 203 NM_178113 78658 Mm.251777 NM_178113 ENSMUSG00000035024 Ncapd3 2810487N22Rik|4632407J06Rik|AI195468|AU018739|B130055D15Rik|mKIAA0056 non-SMC condensin II complex, subunit D3 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-9 chr8 109763640 109763915 + 0.383878263347744 NA Intergenic Intergenic -14806 NM_009677 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-11 chr17 70846571 70846886 + 0.383878263347744 NA promoter-TSS (NM_001164077) promoter-TSS (NM_001164077) 49 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-4 chr11 95105739 95105938 + 0.383878263347744 NA Intergenic Intergenic -14279 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-5 chr16 24914021 24914312 + 0.383878263347744 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -145473 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744 chr17 24885913 24886272 + 0.383878263347744 NA promoter-TSS (NM_001163750) promoter-TSS (NM_001163750) 258 NM_001355396 26426 Mm.36718 NM_011956 ENSMUSG00000039183 Nubp2 D17Wsu11e nucleotide binding protein 2 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-24 chr9 44494076 44494526 + 0.383878263347744 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) -4835 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-14 chr2 69401624 69401940 + 0.383878263347744 NA 3' UTR (NM_175512, exon 5 of 5) 3' UTR (NM_175512, exon 5 of 5) 21320 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-19 chr5 104402768 104403192 + 0.383878263347744 NA Intergenic Intergenic -32131 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-21 chr6 124758732 124759305 + 0.383878263347744 NA Intergenic Intergenic -2531 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-12 chr2 109917977 109918321 + 0.383878263347744 NA exon (NM_172671, exon 1 of 18) exon (NM_172671, exon 1 of 18) 502 NM_172671 107515 Mm.277351 NM_172671 ENSMUSG00000050199 Lgr4 9130225G07|A330106J01Rik|A930009A08Rik|Gpr48 leucine-rich repeat-containing G protein-coupled receptor 4 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-8 chr17 47267445 47267737 + 0.383878263347744 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 37361 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744 chr1 82831308 82831803 + 0.383878263347744 NA Intergenic Intergenic -7905 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-18 chr4 136285537 136285846 + 0.383878263347744 NA promoter-TSS (NM_009557) promoter-TSS (NM_009557) -376 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding unique_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-4 chr8 8299845 8300443 + 0.383878263347744 NA Intergenic Intergenic 360629 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-25 chrX 166510211 166510411 + 0.383878263347744 NA 5' UTR (NM_001007577, exon 1 of 5) 5' UTR (NM_001007577, exon 1 of 5) 167 NM_001007577 245695 Mm.336318 NM_001007577 ENSMUSG00000051224 Tceanc A630018P17Rik|Gm390 transcription elongation factor A (SII) N-terminal and central domain containing protein-coding unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744 chr13 103388392 103388791 + 0.383878263347744 NA Intergenic Intergenic -54099 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-11 chr2 101986760 101987155 + 0.383878263347744 NA intron (NM_178886, intron 4 of 5) HAL1|LINE|L1 100695 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-2 chr17 26602809 26603248 + 0.383878263347744 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 41516 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-2 chr10 44112324 44112571 + 0.383878263347744 NA Intergenic Intergenic -58000 NR_001582 70365 Mm.87073 NR_001582 ENSMUSG00000091358 Speer5-ps1 1700007C10Rik|SPEER-5|Speer5-ps spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1 pseudo common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-3 chr13 42328329 42328668 + 0.383878263347744 NA Intergenic Intergenic 27022 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-3 chr17 46888991 46889340 + 0.383878263347744 NA Intergenic Intergenic -1456 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-7 chr13 45391261 45391514 + 0.383878263347744 NA intron (NM_153789, intron 2 of 6) intron (NM_153789, intron 2 of 6) 1645 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744 chr1 175880543 175880761 + 0.383878263347744 NA promoter-TSS (NM_012012) promoter-TSS (NM_012012) -126 NM_012012 26909 Mm.283046 NM_012012 ENSMUSG00000039748 Exo1 5730442G03Rik|Msa exonuclease 1 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-6 chr3 121682502 121682907 + 0.383878263347744 NA intron (NM_001033814, intron 5 of 5) intron (NM_001033814, intron 5 of 5) 11941 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-6 chr4 125131187 125131509 + 0.383878263347744 NA Intergenic Intergenic -3467 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-12 chr18 56925019 56925340 + 0.383878263347744 NA intron (NM_177115, intron 1 of 4) CpG 369 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-6 chr3 130053088 130053590 + 0.383878263347744 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 7568 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-5 chr12 51347664 51347928 + 0.383878263347744 NA promoter-TSS (NM_001167963) promoter-TSS (NM_001167963) -434 NM_001167964 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-14 chr2 152951420 152951824 + 0.383878263347744 NA promoter-TSS (NM_145744) promoter-TSS (NM_145744) -40 NM_001159376 252864 Mm.330671 NM_145744 ENSMUSG00000042662 Dusp15 AI851682|LMW-DSP10|T-DSP10 dual specificity phosphatase-like 15 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744 chr1 71923008 71923501 + 0.383878263347744 NA Intergenic Intergenic 35142 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-15 chr3 36613046 36613321 + 0.383878263347744 NA intron (NM_027810, intron 1 of 18) CpG 206 NM_027810 71492 Mm.286187 NM_027810 ENSMUSG00000037325 Bbs7 8430406N16Rik Bardet-Biedl syndrome 7 (human) protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-16 chr4 11762931 11763280 + 0.383878263347744 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 4948 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-2 chr3 104994269 104994570 + 0.383878263347744 NA Intergenic Intergenic -32710 NM_009520 22414 Mm.10740 NM_009520 ENSMUSG00000027840 Wnt2b Wnt13 wingless-type MMTV integration site family, member 2B protein-coding unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-3 chr19 57118270 57118669 + 0.383878263347744 NA intron (NM_001103177, intron 6 of 21) intron (NM_001103177, intron 6 of 21) 555 NM_001347459 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-13 chr2 137659463 137660049 + 0.383878263347744 NA Intergenic Intergenic -543236 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-20 chr6 6211947 6212335 + 0.383878263347744 NA intron (NM_001177572, intron 1 of 17) intron (NM_001177572, intron 1 of 17) 5032 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-5 chr15 77796312 77796592 + 0.383878263347744 NA intron (NM_022410, intron 4 of 40) intron (NM_022410, intron 4 of 40) -39442 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding unique_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744 chr11 97308819 97309329 + 0.383878263347744 NA Intergenic Intergenic -6642 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-7 chr6 18848155 18848407 + 0.383878263347744 NA promoter-TSS (NM_133939) promoter-TSS (NM_133939) -354 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-4 chr2 173270554 173270984 + 0.383878263347744 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 5764 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-8 chr14 57730159 57730428 + 0.383878263347744 NA intron (NM_153382, intron 1 of 1) intron (NM_153382, intron 1 of 1) 4125 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-4 chr15 32260954 32261292 + 0.383878263347744 NA intron (NM_009154, intron 1 of 22) intron (NM_009154, intron 1 of 22) 16310 NM_009154 20356 Mm.260374 NM_009154 ENSMUSG00000022231 Sema5a 5930434A13|9130201M22Rik|AI464145|Semaf|semF sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-8 chr5 142797986 142798358 + 0.383878263347744 NA intron (NM_178242, intron 2 of 15) MER44D|DNA|TcMar-Tigger 19215 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-3 chr11 52098068 52098364 + 0.383878263347744 NA promoter-TSS (NM_019411) promoter-TSS (NM_019411) -608 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-10 chr16 24911376 24911882 + 0.383878263347744 NA intron (NM_178665, intron 10 of 12) (TTCC)n|Simple_repeat|Simple_repeat -148010 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-7 chr5 103376101 103376446 + 0.383878263347744 NA Intergenic Intergenic 29675 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-9 chr19 37672787 37673363 + 0.383878263347744 NA intron (NM_175353, intron 20 of 21) ID_B1|SINE|B4 -12605 NM_001105201 546726 Mm.457750 NM_001105201 ENSMUSG00000062432 Cyp26c1 EG546726 cytochrome P450, family 26, subfamily c, polypeptide 1 protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-2 chr12 26469194 26469427 + 0.383878263347744 NA promoter-TSS (NM_020557) promoter-TSS (NM_020557) 95 NM_020557 22169 Mm.271839 NM_020557 ENSMUSG00000020638 Cmpk2 1200004E04Rik|TDKI|Tyki cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial protein-coding unique_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-5 chr8 11463492 11463923 + 0.383878263347744 NA intron (NM_011227, intron 1 of 1) intron (NM_011227, intron 1 of 1) -14222 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-17 chr9 107308490 107308711 + 0.383878263347744 NA Intergenic Intergenic 11941 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-4 chr17 82905566 82905860 + 0.383878263347744 NA Intergenic Intergenic 172512 NR_045094 100503434 Mm.187281 NR_045094 Gm19689 - predicted gene, 19689 ncRNA common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-13 chr19 43963342 43963681 + 0.383878263347744 NA intron (NM_030703, intron 7 of 8) intron (NM_030703, intron 7 of 8) 23009 NM_030703 93721 Mm.206774 NM_030703 ENSMUSG00000025196 Cpn1 0610011F20Rik|CPN carboxypeptidase N, polypeptide 1 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-7 chr4 95053530 95053983 + 0.383878263347744 NA Intergenic Intergenic -1534 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-15 chr3 79884418 79884756 + 0.383878263347744 NA Intergenic Intergenic -1343 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-3 chr15 99889024 99889454 + 0.383878263347744 NA Intergenic Intergenic -13783 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-6 chr13 24281198 24281564 + 0.383878263347744 NA promoter-TSS (NM_001311122) promoter-TSS (NM_001311122) -591 NM_026825 68732 Mm.211047 NM_026825 ENSMUSG00000021338 Carmil1 1110037D04Rik|AI425970|CARMIL|CARML1|D130057M20|Lrrc16|Lrrc16a capping protein regulator and myosin 1 linker 1 protein-coding common_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-16 chr7 81523698 81524056 + 0.383878263347744 NA intron (NR_045299, intron 1 of 4) IMPB_01|Satellite|Satellite 327 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-2 chr11 70196768 70196990 + 0.383878263347744 NA Intergenic Intergenic -17031 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-17 chr4 122884165 122884686 + 0.383878263347744 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 1651 NM_001358035 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding unique_peak2_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-3 chr5 144356998 144357416 + 0.383878263347744 NA promoter-TSS (NR_102374) promoter-TSS (NR_102374) -716 NR_102374 100579137 NR_102372 ENSMUSG00000104600 Dmrt1i Dmr Dmrt1 interacting ncRNA ncRNA unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-2 chr14 16244147 16244575 + 0.383878263347744 NA intron (NM_001359882, intron 1 of 3) intron (NM_001359882, intron 1 of 3) -1030 NM_001359883 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-7 chr16 57685488 57685916 + 0.383878263347744 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 69035 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-10 chr2 37748694 37749216 + 0.383878263347744 NA Intergenic Intergenic -27294 NM_001163566 241324 Mm.392369 NM_001163566 ENSMUSG00000035403 Crb2 5930402A21|BC043114 crumbs family member 2 protein-coding common_peak2_27_19_0.209770998904562_4.42681359433964_0.383878263347744-10 chr9 22156893 22157160 + 0.383878263347744 NA intron (NM_001082532, intron 1 of 1) CpG 180 NM_001082532 66268 Mm.28924 NM_025457 ENSMUSG00000010607 Pigyl 1810008A14Rik|PIG-Y|Pigy phosphatidylinositol glycan anchor biosynthesis, class Y-like protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-22 chr8 45610498 45610818 + 0.383878263347744 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -17093 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak1_22_23_-0.335054219351657_4.41743539104533_0.383878263347744-4 chr15 101320352 101320611 + 0.383878263347744 NA Intergenic Intergenic 27269 NR_033803 77717 Mm.391998 NR_033803 ENSMUSG00000075408 6030408B16Rik AI225877 RIKEN cDNA 6030408B16 gene ncRNA unique_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-5 chr3 144602527 144602913 + 0.383878263347744 NA Intergenic Intergenic 32293 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_27_19_0.209770998904562_4.42681359433964_0.383878263347744-6 chr16 10545487 10545771 + 0.383878263347744 NA exon (NM_001204229, exon 1 of 23) exon (NM_001204229, exon 1 of 23) 290 NM_001204229 74374 Mm.159176 NM_177562 ENSMUSG00000068663 Clec16a 4932416N17Rik|curt|mKIAA0350 C-type lectin domain family 16, member A protein-coding common_peak1_107_80_0.12564186844229_6.40267093710577_0.383784045838184 chr3 40681454 40682437 + 0.383784045838184 NA intron (NM_175515, intron 7 of 15) intron (NM_175515, intron 7 of 15) -26926 NM_178386 73333 Mm.78691 NM_178386 ENSMUSG00000069041 Slc25a31 1700034J06Rik|Ant4|Sfec solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 protein-coding common_peak1_106_80_0.112316034144534_6.39600801995689_0.383784045838184-3 chr5 102068984 102070217 + 0.383784045838184 NA 5' UTR (NM_172882, exon 1 of 67) 5' UTR (NM_172882, exon 1 of 67) 321 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding common_peak1_97_88_-0.149430267173587_6.4010182973796_0.383784045838184 chr17 65782306 65783208 + 0.383784045838184 NA promoter-TSS (NR_104465) promoter-TSS (NR_104465) -598 NR_152099 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_106_80_0.112316034144534_6.39600801995689_0.383784045838184 chr10 86217948 86219526 + 0.383784045838184 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -81675 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_106_80_0.112316034144534_6.39600801995689_0.383784045838184 chr4 109676112 109677723 + 0.383784045838184 NA 5' UTR (NM_007983, exon 1 of 19) 5' UTR (NM_007983, exon 1 of 19) 290 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak1_106_80_0.112316034144534_6.39600801995689_0.383784045838184-4 chr7 43442707 43443528 + 0.383784045838184 NA promoter-TSS (NM_026695) promoter-TSS (NM_026695) -955 NM_026695 110826 Mm.30200 NM_026695 ENSMUSG00000004610 Etfb 0610009I16Rik|2810441H06Rik electron transferring flavoprotein, beta polypeptide protein-coding common_peak2_97_88_-0.149430267173587_6.4010182973796_0.383784045838184 chr15 10769938 10771311 + 0.383784045838184 NA intron (NR_045063, intron 5 of 6) intron (NR_045063, intron 5 of 6) 55724 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak1_106_80_0.112316034144534_6.39600801995689_0.383784045838184-2 chr18 75492729 75493479 + 0.383784045838184 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -21541 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_97_88_-0.149430267173587_6.4010182973796_0.383784045838184-2 chr5 92927281 92928592 + 0.383784045838184 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 29943 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_82_61_0.134127310504043_6.0212599656389_0.383552807395311 chr13 23684329 23685435 + 0.383552807395311 NA promoter-TSS (NM_178189) promoter-TSS (NM_178189) 683 NM_023422 68024 Mm.261676 NM_023422 ENSMUSG00000018102 Hist1h2bc 2610022J01Rik|H2bfs|R74621 histone cluster 1, H2bc protein-coding common_peak1_82_61_0.134127310504043_6.0212599656389_0.383552807395311 chr15 36609283 36610059 + 0.383552807395311 NA promoter-TSS (NM_008774) promoter-TSS (NM_008774) -698 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak1_82_61_0.134127310504043_6.0212599656389_0.383552807395311-3 chr8 117372377 117372987 + 0.383552807395311 NA intron (NM_028941, intron 1 of 20) intron (NM_028941, intron 1 of 20) 23512 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_82_61_0.134127310504043_6.0212599656389_0.383552807395311-3 chr9 120739343 120740292 + 0.383552807395311 NA Intergenic Intergenic 162486 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA common_peak1_82_61_0.134127310504043_6.0212599656389_0.383552807395311-2 chr2 11777767 11779052 + 0.383552807395311 NA promoter-TSS (NM_001348237) promoter-TSS (NM_001348237) 656 NM_177268 320816 Mm.260201 NM_177268 ENSMUSG00000047909 Ankrd16 2810455F06Rik|AI646698|D430029B21Rik ankyrin repeat domain 16 protein-coding common_peak2_82_61_0.134127310504043_6.0212599656389_0.383552807395311-2 chr18 84087666 84088617 + 0.383552807395311 NA promoter-TSS (NM_146090) promoter-TSS (NM_146090) -17 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak1_73_68_-0.184618695293971_6.01621510913118_0.383552807395299 chr11 101316296 101317531 + 0.383552807395299 NA intron (NM_011192, intron 1 of 10) intron (NM_011192, intron 1 of 10) 700 NM_011192 19192 Mm.288477 NM_011192 ENSMUSG00000078652 Psme3 AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) protein-coding common_peak1_73_68_-0.184618695293971_6.01621510913118_0.383552807395299-3 chr13 60018715 60019722 + 0.383552807395299 NA Intergenic Intergenic -10493 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_73_68_-0.184618695293971_6.01621510913118_0.383552807395299-2 chr11 102319509 102320628 + 0.383552807395299 NA promoter-TSS (NM_001302954) promoter-TSS (NM_001302954) -972 NM_011551 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_73_68_-0.184618695293971_6.01621510913118_0.383552807395299-4 chr17 70754218 70754977 + 0.383552807395299 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 92180 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_538_418_0.0575771088994781_8.73959498814909_0.383419827361854 chr15 102963263 102966441 + 0.383419827361854 NA Intergenic Intergenic -1944 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding common_peak2_202_154_0.0933926861039147_7.32282074832619_0.383412521343031 chr15 84923369 84924495 + 0.383412521343031 NA intron (NM_016714, intron 1 of 7) CpG 504 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_154_137_-0.125472998044753_7.04578795775579_0.383302419153864 chr16 65816935 65818864 + 0.383302419153864 NA intron (NM_028572, intron 1 of 3) intron (NM_028572, intron 1 of 3) 2266 NM_028572 73569 Mm.25670 NM_028572 ENSMUSG00000091243 Vgll3 1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2 vestigial like family member 3 protein-coding common_peak1_226_197_-0.0997643099847645_7.57947446508723_0.382900015423406 chr7 19269267 19272863 + 0.382900015423406 NA intron (NM_009499, intron 1 of 12) intron (NM_009499, intron 1 of 12) 789 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak1_125_112_-0.133863643741597_6.75324714054439_0.382862865257914 chr8 120100806 120101950 + 0.382862865257914 NA promoter-TSS (NM_133967) promoter-TSS (NM_133967) 94 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_136_103_0.105775855974688_6.75332764612844_0.382862865257914 chr7 128237429 128238338 + 0.382862865257914 NA 5' UTR (NM_146205, exon 1 of 6) 5' UTR (NM_146205, exon 1 of 6) 148 NM_177001 100043133 Mm.183647 NM_177001 ENSMUSG00000062944 9130023H24Rik GLI4 RIKEN cDNA 9130023H24 gene protein-coding common_peak1_98_89_-0.151006489277706_6.41634985169082_0.382809744802044 chrX 73966453 73967612 + 0.382809744802044 NA promoter-TSS (NM_008224) promoter-TSS (NM_008224) -675 NM_008224 15161 Mm.491126 NM_008224 ENSMUSG00000031386 Hcfc1 AW060991|HCF|HCF1 host cell factor C1 protein-coding common_peak1_108_81_0.121142880510362_6.41812344487326_0.382809744802044 chr2 120608604 120609765 + 0.382809744802044 NA promoter-TSS (NM_025475) promoter-TSS (NM_025475) 131 NM_025657 66606 Mm.428639 NM_025657 ENSMUSG00000027286 Lrrc57 2810002D13Rik|AA407405 leucine rich repeat containing 57 protein-coding common_peak1_108_81_0.121142880510362_6.41812344487326_0.382809744802044-2 chr3 133310137 133311069 + 0.382809744802044 NA intron (NM_001293641, intron 1 of 11) CpG 493 NM_001293641 74776 Mm.210305 NM_146141 ENSMUSG00000028013 Ppa2 1110013G13Rik|Sid6306 pyrophosphatase (inorganic) 2 protein-coding common_peak2_108_81_0.121142880510362_6.41812344487326_0.382809744802044-2 chr19 10108607 10109412 + 0.382809744802044 NA Intergenic Intergenic -7506 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_108_81_0.121142880510362_6.41812344487326_0.382809744802044-3 chr8 69088705 69089819 + 0.382809744802044 NA promoter-TSS (NM_153054) promoter-TSS (NM_153054) -40 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak2_108_81_0.121142880510362_6.41812344487326_0.382809744802044 chr11 99558777 99559820 + 0.382809744802044 NA Intergenic Intergenic -2445 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding common_peak2_377_292_0.065339086905551_8.22742639787502_0.382604681625734 chr11 69408690 69411779 + 0.382604681625734 NA intron (NM_001017426, intron 1 of 22) CpG 3441 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak2_54_51_-0.201607416790153_5.59963600974602_0.382513308492835 chr19 23134648 23135560 + 0.382513308492835 NA Intergenic CpG -6122 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_54_51_-0.201607416790153_5.59963600974602_0.382513308492835-2 chr6 55438349 55439190 + 0.382513308492835 NA Intergenic Intergenic -13209 NM_001025372 11517 Mm.44245 NM_007407 ENSMUSG00000029778 Adcyap1r1 2900024I10Rik|AI846590|PAC1|PAC1R|PACAP1-R adenylate cyclase activating polypeptide 1 receptor 1 protein-coding common_peak2_54_51_-0.201607416790153_5.59963600974602_0.382513308492835-3 chr8 31112209 31113169 + 0.382513308492835 NA intron (NM_175136, intron 1 of 5) intron (NM_175136, intron 1 of 5) 843 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak1_54_51_-0.201607416790153_5.59963600974602_0.382513308492835 chr9 85617072 85617572 + 0.382513308492835 NA Intergenic Intergenic 132012 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding common_peak2_61_45_0.146887583495769_5.5970057478049_0.382513308492823-2 chr8 75090034 75090902 + 0.382513308492823 NA Intergenic Intergenic -3150 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak2_61_45_0.146887583495769_5.5970057478049_0.382513308492823 chr18 24602938 24603633 + 0.382513308492823 NA promoter-TSS (NM_021448) promoter-TSS (NM_021448) 532 NM_139143 106957 Mm.21688 NM_139143 ENSMUSG00000024270 Slc39a6 Ermelin|Zip6 solute carrier family 39 (metal ion transporter), member 6 protein-coding common_peak2_228_198_-0.0944662925314548_7.58939147427792_0.382473469816477 chr10 12867214 12869545 + 0.382473469816477 NA Intergenic Intergenic -6644 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_204_156_0.0889407378894456_7.33909111783635_0.382391907126123 chr19 53529319 53530657 + 0.382391907126123 NA intron (NM_001085390, intron 1 of 3) CpG 670 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_204_156_0.0889407378894456_7.33909111783635_0.382391907126123 chr17 28328550 28330228 + 0.382391907126123 NA exon (NM_011287, exon 4 of 6) exon (NM_011287, exon 4 of 6) 824 NM_001357628 19896 Mm.336955 NM_011287 ENSMUSG00000037805 Rpl10a CsA-19|Nedd6 ribosomal protein L10A protein-coding common_peak2_74_69_-0.186148552565204_6.03620874066236_0.382291706502818 chr12 108179790 108180388 + 0.382291706502818 NA promoter-TSS (NM_028262) promoter-TSS (NM_028262) 351 NM_009832 12454 Mm.474441 NM_009832 ENSMUSG00000021258 Ccnk AW123198|AW413594|CPR4|CycK cyclin K protein-coding common_peak1_74_69_-0.186148552565204_6.03620874066236_0.382291706502818-4 chr7 101896403 101897365 + 0.382291706502818 NA intron (NM_001291349, intron 1 of 4) intron (NM_001291349, intron 1 of 4) 553 NM_001291349 75430 Mm.284491 NM_027532 ENSMUSG00000030649 Anapc15 3200002M19Rik|6330414C15Rik|APC15 anaphase prompoting complex C subunit 15 protein-coding common_peak2_74_69_-0.186148552565204_6.03620874066236_0.382291706502818-3 chr4 83485669 83486788 + 0.382291706502818 NA intron (NM_001355203, intron 1 of 10) CpG-10005 235 NM_001290527 101739 Mm.105331 NM_133948 ENSMUSG00000028484 Psip1 AA408851|AU015605|Dfs70|Ledgfa|Ledgfb|Psip2 PC4 and SFRS1 interacting protein 1 protein-coding common_peak2_74_69_-0.186148552565204_6.03620874066236_0.382291706502818-2 chr3 54806870 54807887 + 0.382291706502818 NA exon (NM_133231, exon 1 of 3) exon (NM_133231, exon 1 of 3) 413 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding common_peak1_74_69_-0.186148552565204_6.03620874066236_0.382291706502818 chr15 34494808 34495712 + 0.382291706502818 NA promoter-TSS (NM_008287) promoter-TSS (NM_008287) -14 NM_008287 15473 Mm.491154 NM_008287 ENSMUSG00000022323 Rida HR12|HRP12|Hrsp12 reactive intermediate imine deaminase A homolog protein-coding common_peak1_74_69_-0.186148552565204_6.03620874066236_0.382291706502818-2 chr16 17922018 17922896 + 0.382291706502818 NA Intergenic Intergenic 5762 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_74_69_-0.186148552565204_6.03620874066236_0.382291706502818-4 chr6 31398828 31399723 + 0.382291706502818 NA promoter-TSS (NR_040300) promoter-TSS (NR_040300) 447 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding common_peak2_75_69_-0.167174541973064_6.04569574595843_0.382291706502818 chr3 109156216 109157097 + 0.382291706502818 NA intron (NM_172685, intron 4 of 9) intron (NM_172685, intron 4 of 9) 33507 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_74_69_-0.186148552565204_6.03620874066236_0.382291706502818-3 chr7 65470142 65470753 + 0.382291706502818 NA Intergenic Intergenic -99203 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak1_83_62_0.128199792946219_6.04137981997303_0.382291706502806-3 chr7 82867413 82868461 + 0.382291706502806 NA intron (NM_175366, intron 1 of 1) CpG-13318 604 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak1_83_62_0.128199792946219_6.04137981997303_0.382291706502806-2 chr5 125392607 125393145 + 0.382291706502806 NA Intergenic Intergenic -2859 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_83_62_0.128199792946219_6.04137981997303_0.382291706502806 chr2 60124203 60124998 + 0.382291706502806 NA intron (NM_001001182, intron 1 of 35) intron (NM_001001182, intron 1 of 35) 1140 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_83_62_0.128199792946219_6.04137981997303_0.382291706502806-2 chr2 120970122 120971053 + 0.382291706502806 NA exon (NM_009461, exon 1 of 47) exon (NM_009461, exon 1 of 47) 128 NM_009461 22222 Mm.389330 NM_009461 ENSMUSG00000027272 Ubr1 AI504731 ubiquitin protein ligase E3 component n-recognin 1 protein-coding common_peak1_83_62_0.128199792946219_6.04137981997303_0.382291706502806 chr2 151494306 151495096 + 0.382291706502806 NA intron (NM_198326, intron 1 of 8) CpG 519 NM_198326 386649 Mm.419479 NM_198326 ENSMUSG00000027455 Nsfl1c Munc-18c|Stxbp3a|p47 NSFL1 (p97) cofactor (p47) protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-8 chr4 32221414 32221989 + 0.382130460680159 NA Intergenic Intergenic -195734 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-4 chr3 98419035 98419587 + 0.382130460680159 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 36830 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-3 chr16 30187471 30187987 + 0.382130460680159 NA Intergenic Intergenic 79803 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak2_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-2 chr12 13098893 13099512 + 0.382130460680159 NA Intergenic Intergenic 149972 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159 chr1 82283370 82284124 + 0.382130460680159 NA intron (NM_010570, intron 1 of 1) intron (NM_010570, intron 1 of 1) 7692 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-3 chr16 56716353 56716951 + 0.382130460680159 NA intron (NM_001357126, intron 1 of 8) intron (NM_001357126, intron 1 of 8) 798 NM_001357124 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak1_36_36_-0.278492624571508_5.0702070533432_0.382130460680159 chr10 127188293 127188760 + 0.382130460680159 NA 5' UTR (NM_001358557, exon 1 of 15) 5' UTR (NM_001358557, exon 1 of 15) 246 NM_001358557 52666 Mm.272230 NM_028027 ENSMUSG00000019467 Arhgef25 2410008H17Rik|D10Ertd610e|GEFT Rho guanine nucleotide exchange factor (GEF) 25 protein-coding common_peak2_36_36_-0.278492624571508_5.0702070533432_0.382130460680159 chr10 17103820 17104922 + 0.382130460680159 NA Intergenic L1MC1|LINE|L1 -8589 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-5 chr19 4440574 4441036 + 0.382130460680159 NA intron (NR_045989, intron 1 of 4) ID_B1|SINE|B4 1246 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-6 chr3 152142904 152143482 + 0.382130460680159 NA intron (NM_016867, intron 1 of 5) intron (NM_016867, intron 1 of 5) 22707 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak2_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-5 chr9 120492624 120493182 + 0.382130460680159 NA intron (NM_026892, intron 1 of 3) CpG 297 NM_026892 68969 Mm.28753 NM_026892 ENSMUSG00000006941 Eif1b 1500010M16Rik|3110001N14Rik|Gc20 eukaryotic translation initiation factor 1B protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-10 chr8 84197343 84197745 + 0.382130460680159 NA Intergenic CpG -10974 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-6 chr2 32679641 32680041 + 0.382130460680159 NA intron (NM_001146348, intron 12 of 14) L1Md_T|LINE|L1 7925 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA unique_peak1_36_36_-0.278492624571508_5.0702070533432_0.382130460680159 chr4 114337119 114337609 + 0.382130460680159 NA Intergenic Intergenic -69360 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding common_peak2_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-3 chr16 11134115 11134512 + 0.382130460680159 NA exon (NM_029582, exon 1 of 12) exon (NM_029582, exon 1 of 12) 219 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-3 chr16 4963749 4964171 + 0.382130460680159 NA promoter-TSS (NM_001271586) promoter-TSS (NM_001271586) 277 NM_028301 72615 Mm.290628 NM_028301 ENSMUSG00000022515 Anks3 2700067D09Rik|C81345|mKIAA1977 ankyrin repeat and sterile alpha motif domain containing 3 protein-coding common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-2 chr13 5822225 5823037 + 0.382130460680159 NA Intergenic Intergenic 35461 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-8 chr5 113156485 113156946 + 0.382130460680159 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 6598 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-9 chr7 127016529 127016977 + 0.382130460680159 NA TTS (NM_001102563) TTS (NM_001102563) 599 NM_030240 67278 Mm.345385 NM_030240 ENSMUSG00000107068 Pagr1a 2900092E17Rik|C77040|PA1|PAGR1 PAXIP1 associated glutamate rich protein 1A protein-coding common_peak1_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-2 chr15 11399821 11400375 + 0.382130460680159 NA promoter-TSS (NM_033074) promoter-TSS (NM_033074) -440 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-9 chr8 32200144 32200572 + 0.382130460680159 NA Intergenic Intergenic 48463 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-5 chr2 165866323 165866815 + 0.382130460680159 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) -8396 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-4 chr17 70737782 70738236 + 0.382130460680159 NA intron (NM_001347411, intron 9 of 14) URR1B|DNA|hAT-Charlie 108768 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-4 chr2 156720300 156720806 + 0.382130460680159 NA promoter-TSS (NM_001042487) promoter-TSS (NM_001042487) 356 NR_040505 74846 Mm.443946 NR_040505 ENSMUSG00000086638 4930405A21Rik - RIKEN cDNA 4930405A21 gene ncRNA common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159 chr1 134079385 134079752 + 0.382130460680159 NA promoter-TSS (NM_007570) promoter-TSS (NM_007570) -413 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-2 chr10 24465842 24466565 + 0.382130460680159 NA Intergenic Intergenic -129239 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-7 chr2 59339378 59339886 + 0.382130460680159 NA intron (NM_175464, intron 15 of 20) intron (NM_175464, intron 15 of 20) 47050 NR_040510 76676 Mm.110038 NR_040510 ENSMUSG00000087455 5330411J11Rik - RIKEN cDNA 5330411J11 gene ncRNA common_peak2_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-11 chrX 142898724 142899448 + 0.382130460680159 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 67642 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak1_37_36_-0.240289911083803_5.08930841008705_0.382130460680159-7 chr5 33658189 33658416 + 0.382130460680159 NA promoter-TSS (NM_001356983) promoter-TSS (NM_001356983) 174 NM_001040435 21335 Mm.379024 NM_011524 ENSMUSG00000037313 Tacc3 Aint|C86661|Eric1 transforming, acidic coiled-coil containing protein 3 protein-coding common_peak1_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-5 chr7 65931556 65932143 + 0.382130460680159 NA intron (NM_011048, intron 6 of 21) intron (NM_011048, intron 6 of 21) 69713 NM_011048 18553 Mm.294007 NM_011048 ENSMUSG00000030513 Pcsk6 C86343|Pace4|SPC4|b2b2830Clo proprotein convertase subtilisin/kexin type 6 protein-coding common_peak2_36_36_-0.278492624571508_5.0702070533432_0.382130460680159-4 chr4 120924668 120925364 + 0.382130460680159 NA promoter-TSS (NM_001160043) promoter-TSS (NM_001160043) -11 NM_001160043 73172 Mm.151436 NM_028457 ENSMUSG00000028629 Exo5 3110037I16Rik|AV297100|Dem1|Exo V|mExo5 exonuclease 5 protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-3 chr11 58903747 58904191 + 0.382130460680153 NA intron (NM_011758, intron 1 of 4) intron (NM_011758, intron 1 of 4) 256 NM_011758 22698 Mm.127646 NM_011758 ENSMUSG00000037001 Zfp39 CTfin33|Zfp-39 zinc finger protein 39 protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153 chr10 68263699 68264478 + 0.382130460680153 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 14638 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-2 chr10 119240311 119240946 + 0.382130460680153 NA promoter-TSS (NM_027994) promoter-TSS (NM_027994) -573 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding unique_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-2 chr15 10817758 10818157 + 0.382130460680153 NA Intergenic Intergenic -11094 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-8 chr4 151996485 151997036 + 0.382130460680153 NA promoter-TSS (NM_172705) promoter-TSS (NM_172705) -581 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak2_43_31_0.17917540259706_5.08958770129853_0.382130460680153-3 chr5 130029161 130029733 + 0.382130460680153 NA intron (NM_007761, intron 1 of 5) CpG 141 NM_007761 12909 Mm.18072 NM_007761 ENSMUSG00000025532 Crcp AL022669 calcitonin gene-related peptide-receptor component protein protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-7 chr18 84588773 84589152 + 0.382130460680153 NA intron (NM_001033341, intron 1 of 8) CpG 542 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-6 chr15 101388142 101388826 + 0.382130460680153 NA Intergenic Intergenic -18359 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-9 chr6 13871260 13872020 + 0.382130460680153 NA promoter-TSS (NM_001352887) promoter-TSS (NM_001352887) 71 NR_045995 76311 Mm.367129 NR_045995 ENSMUSG00000097616 1110019D14Rik - RIKEN cDNA 1110019D14 gene ncRNA common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-5 chr13 85289672 85290091 + 0.382130460680153 NA promoter-TSS (NM_145452) promoter-TSS (NM_145452) -395 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_43_31_0.17917540259706_5.08958770129853_0.382130460680153-4 chr9 106891514 106891895 + 0.382130460680153 NA intron (NM_029103, intron 1 of 3) CpG 234 NM_029103 74840 Mm.29778 NM_029103 ENSMUSG00000032575 Manf 3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17 mesencephalic astrocyte-derived neurotrophic factor protein-coding common_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153-4 chr12 108371221 108371826 + 0.382130460680153 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) 370 NM_001286346 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding unique_peak1_43_31_0.17917540259706_5.08958770129853_0.382130460680153 chr12 8859748 8860416 + 0.382130460680153 NA Intergenic Intergenic -61225 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak2_43_31_0.17917540259706_5.08958770129853_0.382130460680153 chr10 83321231 83321887 + 0.382130460680153 NA intron (NM_177388, intron 1 of 10) intron (NM_177388, intron 1 of 10) 16258 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak2_43_31_0.17917540259706_5.08958770129853_0.382130460680153-2 chr14 76698338 76698761 + 0.382130460680153 NA Intergenic Intergenic 20981 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak2_137_104_0.102388406784343_6.76543972105829_0.382108210316536 chr4 40969494 40971358 + 0.382108210316536 NA promoter-TSS (NM_001290449) promoter-TSS (NM_001290449) -480 NM_001290449 74164 Mm.247456 NM_023739 ENSMUSG00000028423 Nfx1 1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding common_peak2_170_129_0.101411866398359_7.07307374622763_0.382073897817893 chr1 134100216 134101195 + 0.382073897817893 NA Intergenic Intergenic -10537 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_99_90_-0.152550757619633_6.43151926138888_0.381858126774389 chr7 106236995 106237860 + 0.381858126774389 NA Intergenic Intergenic -22087 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_109_82_0.11673789043077_6.43340837656231_0.381858126774364-2 chr5 137073977 137075118 + 0.381858126774364 NA Intergenic Intergenic -2275 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak1_109_82_0.11673789043077_6.43340837656231_0.381858126774364 chr15 98144983 98146047 + 0.381858126774364 NA intron (NM_001170711, intron 1 of 3) CpG 187 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding common_peak1_158_140_-0.120000674474722_7.07955101516143_0.381473296854334 chr3 65926806 65928241 + 0.381473296854334 NA Intergenic Intergenic 30726 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak2_128_114_-0.125466898080732_6.78275660190401_0.381367350791263-2 chr17 24414718 24415630 + 0.381367350791263 NA promoter-TSS (NR_033554) promoter-TSS (NR_033554) 499 NM_001080128 19826 Mm.1951 NM_009070 ENSMUSG00000034681 Rnps1 - ribonucleic acid binding protein S1 protein-coding common_peak2_128_114_-0.125466898080732_6.78275660190401_0.381367350791263 chr1 162739779 162740558 + 0.381367350791263 NA intron (NM_001081290, intron 1 of 34) CpG 388 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding common_peak2_138_105_0.0990565968198878_6.77744875297314_0.381367350791238 chr18 36280243 36281355 + 0.381367350791238 NA promoter-TSS (NM_008989) promoter-TSS (NM_008989) -363 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak1_139_105_0.109325578836117_6.78258324398126_0.381367350791238 chr7 135608873 135609774 + 0.381367350791238 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 3495 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_334_258_0.0702916695612235_8.05195412246717_0.381342844971238 chr3 87981945 87984499 + 0.381342844971238 NA Intergenic Intergenic 12129 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak1_84_63_0.122432776517086_6.06121638825854_0.381068586924698-3 chr8 106619934 106620563 + 0.381068586924698 NA intron (NM_009864, intron 2 of 15) intron (NM_009864, intron 2 of 15) 16898 NM_009864 12550 Mm.35605 NM_009864 ENSMUSG00000000303 Cdh1 AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um cadherin 1 protein-coding common_peak2_76_70_-0.168912667333493_6.06529078583794_0.381068586924698-2 chr13 65112318 65113425 + 0.381068586924698 NA 5' UTR (NM_133680, exon 1 of 12) 5' UTR (NM_133680, exon 1 of 12) 111 NM_001083901 66631 Mm.239196 NM_133680 ENSMUSG00000038212 Mfsd14b 5730414C17Rik|AU045608|AW539692|Hiatl1 major facilitator superfamily domain containing 14B protein-coding common_peak2_85_63_0.139187550636189_6.06959377531809_0.381068586924698 chr4 47474029 47475154 + 0.381068586924698 NA promoter-TSS (NM_019998) promoter-TSS (NM_019998) -70 NM_024171 66212 Mm.20188 NM_024171 ENSMUSG00000053317 Sec61b 1190006C12Rik|AI326121|AW122942 Sec61 beta subunit protein-coding common_peak1_84_63_0.122432776517086_6.06121638825854_0.381068586924698 chr1 58445148 58446127 + 0.381068586924698 NA promoter-TSS (NM_027351) promoter-TSS (NM_027351) -151 NM_027351 70225 Mm.340195 NM_027351 ENSMUSG00000026035 Ppil3 2310076N22Rik|2510026K04Rik|Cyp10l peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding common_peak2_85_63_0.139187550636189_6.06959377531809_0.381068586924698-2 chr7 127448273 127449076 + 0.381068586924698 NA exon (NM_175163, exon 1 of 3) exon (NM_175163, exon 1 of 3) 484 NM_175163 71131 Mm.474533 NM_175163 ENSMUSG00000048921 Zfp689 4933416E05Rik|Znf689 zinc finger protein 689 protein-coding common_peak1_85_63_0.139187550636189_6.06959377531809_0.381068586924698 chr6 71908340 71909224 + 0.381068586924698 NA promoter-TSS (NM_009088) promoter-TSS (NM_009088) -20 NM_001362069 69956 Mm.30256 NM_027275 ENSMUSG00000063884 Ptcd3 2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39 pentatricopeptide repeat domain 3 protein-coding common_peak2_76_70_-0.168912667333493_6.06529078583794_0.381068586924698-3 chr8 46471188 46471963 + 0.381068586924698 NA intron (NM_007981, intron 1 of 20) CpG 538 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_76_70_-0.168912667333493_6.06529078583794_0.381068586924698 chr1 86703568 86704503 + 0.381068586924698 NA intron (NM_001172157, intron 1 of 21) CpG 231 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding common_peak2_84_63_0.122432776517086_6.06121638825854_0.381068586924698 chr10 83337021 83338086 + 0.381068586924698 NA intron (NM_177388, intron 1 of 10) CpG 264 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak1_84_63_0.122432776517086_6.06121638825854_0.381068586924698-2 chr2 27514783 27515828 + 0.381068586924698 NA intron (NM_080848, intron 1 of 13) CpG 158 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak2_84_63_0.122432776517086_6.06121638825854_0.381068586924698-2 chr11 83896679 83897783 + 0.381068586924698 NA intron (NM_009330, intron 8 of 8) intron (NM_009330, intron 8 of 8) 44271 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_85_63_0.139187550636189_6.06959377531809_0.381068586924698-3 chr9 61373664 61374684 + 0.381068586924698 NA intron (NM_001083928, intron 2 of 19) CpG-15054 1808 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_76_70_-0.168912667333493_6.06529078583794_0.381068586924698 chr15 77928458 77928965 + 0.381068586924698 NA intron (NM_019913, intron 1 of 3) intron (NM_019913, intron 1 of 3) 283 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_110_83_0.112423940932892_6.44852939324521_0.380928408457998 chr9 75195325 75196472 + 0.380928408457998 NA intron (NM_010864, intron 31 of 40) intron (NM_010864, intron 31 of 40) -36116 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding common_peak2_100_91_-0.1540640567996_6.44652992765721_0.380928408457974 chr3 98107182 98109156 + 0.380928408457974 NA intron (NM_010928, intron 12 of 33) intron (NM_010928, intron 12 of 33) -52465 NM_027665 71078 Mm.50711 NM_027665 ENSMUSG00000043468 Adam30 4933424D07Rik|svph4 a disintegrin and metallopeptidase domain 30 protein-coding common_peak1_100_91_-0.1540640567996_6.44652992765721_0.380928408457974 chr10 56378255 56379449 + 0.380928408457974 NA intron (NM_010288, intron 1 of 1) intron (NM_010288, intron 1 of 1) 1552 NM_010288 14609 Mm.378921 NM_010288 ENSMUSG00000050953 Gja1 AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43 gap junction protein, alpha 1 protein-coding common_peak1_100_91_-0.1540640567996_6.44652992765721_0.380928408457974-2 chr4 155812496 155813472 + 0.380928408457974 NA intron (NM_207678, intron 1 of 10) CpG 495 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak2_101_91_-0.139950476066351_6.45358671802384_0.380928408457974 chr4 57844669 57846165 + 0.380928408457974 NA intron (NM_001035532, intron 1 of 3) intron (NM_001035532, intron 1 of 3) 169 NM_001035532 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak2_160_141_-0.112289747707543_7.09360224565091_0.380881534278452 chr8 24437336 24439351 + 0.380881534278452 NA 3' UTR (NM_026931, exon 1 of 1) 3' UTR (NM_026931, exon 1 of 1) 603 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_172_131_0.0960429205084017_7.09241557961265_0.380881534278452 chr13 102897565 102899300 + 0.380881534278452 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 138177 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak1_62_46_0.138781446569197_5.62397957496224_0.380848279231604-4 chr17 64192343 64193080 + 0.380848279231604 NA Intergenic Intergenic 139172 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding common_peak2_62_46_0.138781446569197_5.62397957496224_0.380848279231604-2 chr13 114876353 114877199 + 0.380848279231604 NA intron (NM_008396, intron 7 of 29) intron (NM_008396, intron 7 of 29) 55324 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5|GPIa integrin alpha 2 protein-coding common_peak2_62_46_0.138781446569197_5.62397957496224_0.380848279231604-6 chr9 43115564 43116219 + 0.380848279231604 NA intron (NM_001034863, intron 1 of 2) intron (NM_001034863, intron 1 of 2) 679 NR_153341 235300 Mm.261326 NM_001034863 ENSMUSG00000048503 Tmem136 AA396355|Gm184 transmembrane protein 136 protein-coding common_peak1_62_46_0.138781446569197_5.62397957496224_0.380848279231604-3 chr15 79892093 79892881 + 0.380848279231604 NA promoter-TSS (NM_001160415) promoter-TSS (NM_001160415) 79 NM_030255 80287 Mm.284059 NM_030255 ENSMUSG00000009585 Apobec3 Apobec|Arp3|BC003314|Cem15|Gm20117|Rfv3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 protein-coding common_peak2_62_46_0.138781446569197_5.62397957496224_0.380848279231604-4 chr15 82346051 82346294 + 0.380848279231604 NA TTS (NM_177391) TTS (NM_177391) 126 NM_026914 69029 Mm.260042 NM_026914 ENSMUSG00000022452 Smdt1 1500032L24Rik|Emre single-pass membrane protein with aspartate rich tail 1 protein-coding common_peak2_62_46_0.138781446569197_5.62397957496224_0.380848279231604-3 chr15 79439627 79440802 + 0.380848279231604 NA intron (NM_001359863, intron 1 of 10) intron (NM_001359863, intron 1 of 10) 1604 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak1_55_52_-0.203276340344519_5.62628228439094_0.380848279231604 chr5 77310284 77310966 + 0.380848279231604 NA promoter-TSS (NM_019836) promoter-TSS (NM_019836) 141 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak2_55_52_-0.203276340344519_5.62628228439094_0.380848279231604 chr11 96789201 96790145 + 0.380848279231604 NA intron (NM_007622, intron 1 of 5) CpG 537 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding common_peak1_62_46_0.138781446569197_5.62397957496224_0.380848279231604-5 chr9 121704835 121705776 + 0.380848279231604 NA promoter-TSS (NM_178677) promoter-TSS (NM_178677) -276 NM_001164562 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak2_62_46_0.138781446569197_5.62397957496224_0.380848279231604 chr1 132317432 132318041 + 0.380848279231604 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 1611 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_55_52_-0.203276340344519_5.62628228439094_0.380848279231604-3 chr8 35599374 35600228 + 0.380848279231604 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -10781 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_62_46_0.138781446569197_5.62397957496224_0.380848279231604-2 chr1 91088306 91089358 + 0.380848279231604 NA intron (NM_008515, intron 8 of 22) intron (NM_008515, intron 8 of 22) 35388 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_62_46_0.138781446569197_5.62397957496224_0.380848279231604 chr1 58742813 58743403 + 0.380848279231604 NA intron (NM_001355056, intron 7 of 8) intron (NM_001355056, intron 7 of 8) 12556 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_55_52_-0.203276340344519_5.62628228439094_0.380848279231604-2 chr3 154596825 154597511 + 0.380848279231604 NA promoter-TSS (NM_001168358) promoter-TSS (NM_001168358) -29 NM_001357673 12972 Mm.374855 NM_009968 ENSMUSG00000028199 Cryz Sez9 crystallin, zeta protein-coding common_peak1_55_52_-0.203276340344519_5.62628228439094_0.380848279231604-2 chr6 83326068 83326490 + 0.380848279231604 NA intron (NM_145571, intron 1 of 5) CpG 240 NM_145571 232157 Mm.29500 NM_145571 ENSMUSG00000043131 Mob1a 4022402H07Rik|MOB1|MOB4B|Mobk1b|Mobkl1b MOB kinase activator 1A protein-coding common_peak2_62_46_0.138781446569197_5.62397957496224_0.380848279231604-5 chr5 115559482 115560152 + 0.380848279231604 NA 5' UTR (NM_007475, exon 2 of 7) 5' UTR (NM_007475, exon 2 of 7) 350 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_129_115_-0.126895881065068_6.79453305459504_0.380639911725357 chr4 141572306 141573625 + 0.380639911725357 NA Intergenic Intergenic 26803 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_129_115_-0.126895881065068_6.79453305459504_0.380639911725357-2 chr9 25151035 25151758 + 0.380639911725357 NA 5' UTR (NM_020586, exon 1 of 8) 5' UTR (NM_020586, exon 1 of 8) 385 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak2_129_115_-0.126895881065068_6.79453305459504_0.380639911725357 chr9 63722058 63723593 + 0.380639911725357 NA intron (NM_016769, intron 1 of 8) 5S|rRNA|rRNA 35169 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_140_106_0.105974939555119_6.79445445617871_0.380639911725333-2 chr4 139232821 139234260 + 0.380639911725333 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 39429 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_140_106_0.105974939555119_6.79445445617871_0.380639911725333-4 chr8 110815915 110817307 + 0.380639911725333 NA intron (NM_133953, intron 18 of 25) intron (NM_133953, intron 18 of 25) -10687 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_140_106_0.105974939555119_6.79445445617871_0.380639911725333 chr17 29090520 29092492 + 0.380639911725333 NA intron (NM_001111099, intron 1 of 2) intron (NM_001111099, intron 1 of 2) 527 NM_001111099 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak2_140_106_0.105974939555119_6.79445445617871_0.380639911725333-5 chr9 66349947 66351102 + 0.380639911725333 NA promoter-TSS (NM_145617) promoter-TSS (NM_145617) 74 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak2_140_106_0.105974939555119_6.79445445617871_0.380639911725333-3 chr6 113046318 113047735 + 0.380639911725333 NA intron (NM_001355266, intron 1 of 9) intron (NM_001355266, intron 1 of 9) 724 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding common_peak1_209_160_0.087164757512153_7.37449925687069_0.38042472268519 chr8 82773421 82774759 + 0.38042472268519 NA promoter-TSS (NM_145600) promoter-TSS (NM_145600) 36 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak2_276_238_-0.0861069646648334_7.85781332564833_0.380301501281496 chr7 112298348 112300638 + 0.380301501281496 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) -68815 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_173_132_0.0934112085302878_7.10198803976633_0.380298416374737 chr15 31530213 31531869 + 0.380298416374737 NA promoter-TSS (NM_172606) promoter-TSS (NM_172606) -4 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak1_161_142_-0.113543863224019_7.10309940516638_0.380298416374737 chr19 5805365 5807205 + 0.380298416374737 NA Intergenic Intergenic -3613 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-5 chr13 91911567 91911911 + 0.380101753845079 NA intron (NM_009027, intron 6 of 14) intron (NM_009027, intron 6 of 14) -34854 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-2 chr10 24581415 24581872 + 0.380101753845079 NA Intergenic B4A|SINE|B4 -13799 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-2 chr10 86099882 86100241 + 0.380101753845079 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 4207 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-10 chr4 12906820 12907157 + 0.380101753845079 NA intron (NM_001171801, intron 1 of 4) CpG 151 NM_001171801 208820 Mm.12057 NM_173746 ENSMUSG00000055963 Triqk C130086A10|Gm11818 triple QxxK/R motif containing protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-15 chr6 72361995 72362251 + 0.380101753845079 NA intron (NM_001331167, intron 2 of 5) CpG 309 NM_001331171 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-9 chr3 89203208 89203520 + 0.380101753845079 NA intron (NR_122037, intron 2 of 11) intron (NR_122037, intron 2 of 11) 439 NR_122037 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-7 chr17 78736883 78737182 + 0.380101753845079 NA promoter-TSS (NM_011500) promoter-TSS (NM_011500) -472 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-16 chr6 82879473 82879832 + 0.380101753845079 NA intron (NR_040520, intron 3 of 3) intron (NR_040520, intron 3 of 3) 2201 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-11 chr5 118466085 118466468 + 0.380101753845079 NA Intergenic Intergenic -94443 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-5 chr16 58670258 58670797 + 0.380101753845079 NA exon (NM_007757, exon 1 of 7) exon (NM_007757, exon 1 of 7) 319 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-3 chr11 8460299 8460726 + 0.380101753845079 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 204023 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-7 chr18 4674494 4674772 + 0.380101753845079 NA exon (NM_001081963, exon 3 of 4) exon (NM_001081963, exon 3 of 4) 39704 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-8 chr19 53008952 53009205 + 0.380101753845079 NA intron (NM_133216, intron 8 of 20) intron (NM_133216, intron 8 of 20) 1678 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-13 chr8 10665341 10665616 + 0.380101753845079 NA Intergenic Intergenic 216976 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-13 chr5 92767770 92768072 + 0.380101753845079 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 20641 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-14 chr5 118466105 118466389 + 0.380101753845079 NA Intergenic Intergenic -94472 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-8 chr3 27689072 27689536 + 0.380101753845079 NA intron (NM_001356953, intron 1 of 26) intron (NM_001356953, intron 1 of 26) 21148 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-6 chr15 66817461 66817878 + 0.380101753845079 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 14160 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-4 chr12 8922139 8922340 + 0.380101753845079 NA exon (NM_008640, exon 1 of 7) exon (NM_008640, exon 1 of 7) 932 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-2 chr19 34291295 34291676 + 0.380101753845079 NA intron (NM_007987, intron 1 of 8) intron (NM_007987, intron 1 of 8) 826 NM_001146708 14102 Mm.1626 NM_007987 ENSMUSG00000024778 Fas AI196731|APO1|APT1|CD95|TNFR6|Tnfrsf6|lpr Fas (TNF receptor superfamily member 6) protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-3 chr10 94380920 94381193 + 0.380101753845079 NA intron (NM_001359762, intron 1 of 4) intron (NM_001359762, intron 1 of 4) 69107 NM_001359762 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079 chr10 24470423 24470747 + 0.380101753845079 NA Intergenic Intergenic -124857 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-12 chr6 31098728 31098939 + 0.380101753845079 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -35740 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-6 chr16 84703514 84703827 + 0.380101753845079 NA Intergenic Intergenic -9353 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-10 chr4 105402841 105403174 + 0.380101753845079 NA Intergenic Intergenic 245660 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-4 chr11 57720115 57720370 + 0.380101753845079 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) -70748 NR_153850 78762 Mm.362149 NR_153850 4933424L21Rik - RIKEN cDNA 4933424L21 gene ncRNA common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-11 chr4 83916499 83916906 + 0.380101753845079 NA Intergenic Intergenic 128177 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079 chr10 84727389 84727767 + 0.380101753845079 NA TTS (NM_027423) TTS (NM_027423) -28470 NM_001024918 71137 Mm.79070 NM_027689 ENSMUSG00000020037 Rfx4 4933412G19Rik|NYD-sp10 regulatory factor X, 4 (influences HLA class II expression) protein-coding common_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079-12 chr4 139227158 139227423 + 0.380101753845079 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 33179 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-9 chr19 57314615 57315022 + 0.380101753845079 NA Intergenic CpG 40858 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA common_peak2_28_20_0.18965057817175_4.48714271186464_0.380101753845079-14 chr8 126806656 126806949 + 0.380101753845079 NA Intergenic Intergenic -42218 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak1_28_20_0.18965057817175_4.48714271186464_0.380101753845079 chr12 11266567 11267038 + 0.380101753845079 NA intron (NM_001361252, intron 1 of 9) intron (NM_001361252, intron 1 of 9) 916 NM_025695 67241 Mm.173953 NM_025695 ENSMUSG00000020608 Smc6 2810489L22Rik|3830418C19Rik|AA990493|AU018782|AW742439|SMC-6|Smc6l1|mKIAA4103 structural maintenance of chromosomes 6 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-6 chr18 80707627 80708006 + 0.380101753845076 NA intron (NM_198429, intron 1 of 9) CpG 357 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-10 chr5 136619863 136620112 + 0.380101753845076 NA Intergenic Intergenic -52497 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076 chr12 35245900 35246181 + 0.380101753845076 NA Intergenic Intergenic -51143 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-3 chr17 33092340 33092851 + 0.380101753845076 NA intron (NM_001024950, intron 1 of 3) intron (NM_001024950, intron 1 of 3) 3228 NM_001024950 240068 Mm.121392 NM_001024950 ENSMUSG00000067424 Zfp563 D10628|D130054H01|NTfin7|Zfp413 zinc finger protein 563 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-9 chr7 30232009 30232215 + 0.380101753845076 NA promoter-TSS (NM_027259) promoter-TSS (NM_027259) 38 NM_027259 69920 Mm.440028 NM_027259 ENSMUSG00000019738 Polr2i 2810002B19Rik polymerase (RNA) II (DNA directed) polypeptide I protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-11 chr8 94905230 94905502 + 0.380101753845076 NA intron (NM_001033533, intron 7 of 8) intron (NM_001033533, intron 7 of 8) 12732 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-3 chr15 101388563 101388964 + 0.380101753845076 NA Intergenic Intergenic -18638 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-7 chr19 38223520 38223802 + 0.380101753845076 NA intron (NM_001081075, intron 1 of 13) intron (NM_001081075, intron 1 of 13) 471 NM_001081075 70567 Mm.30607 NM_001081075 ENSMUSG00000054237 Fra10ac1 5730455O13Rik|AI448293 FRA10AC1 homolog (human) protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-9 chr5 135671252 135671551 + 0.380101753845076 NA Intergenic Intergenic -17744 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding unique_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-6 chr4 141286606 141286927 + 0.380101753845076 NA Intergenic Intergenic 8327 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-2 chr15 41712091 41712431 + 0.380101753845076 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -76734 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-6 chr18 38993259 38993522 + 0.380101753845076 NA 5' UTR (NM_175164, exon 1 of 23) 5' UTR (NM_175164, exon 1 of 23) 245 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding unique_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-4 chr4 45511137 45511664 + 0.380101753845076 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 19428 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076 chr1 90519017 90519572 + 0.380101753845076 NA Intergenic Intergenic -84131 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-16 chrX 73228418 73228808 + 0.380101753845076 NA exon (NM_007978, exon 1 of 1) exon (NM_007978, exon 1 of 1) 307 NM_007978 14070 Mm.165807 NM_007978 ENSMUSG00000078317 F8a AI852759|DXUcsf1|F8a1 factor 8-associated gene A protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-5 chr18 35864906 35865351 + 0.380101753845076 NA Intergenic Intergenic 10441 NM_001357459 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-8 chr6 52192191 52192483 + 0.380101753845076 NA promoter-TSS (NM_008265) promoter-TSS (NM_008265) -634 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-15 chr9 96119403 96119773 + 0.380101753845076 NA exon (NM_177352, exon 1 of 17) exon (NM_177352, exon 1 of 17) 159 NM_177352 235533 Mm.213651 NM_177352 ENSMUSG00000041440 Gk5 AV095337|C330018K18Rik|G630067D24Rik glycerol kinase 5 (putative) protein-coding unique_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-2 chr16 38452171 38452550 + 0.380101753845076 NA intron (NM_007414, intron 1 of 3) intron (NM_007414, intron 1 of 3) 329 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-2 chr11 72145285 72145665 + 0.380101753845076 NA Intergenic Intergenic -9586 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-4 chr16 91491930 91492243 + 0.380101753845076 NA intron (NM_010508, intron 2 of 10) intron (NM_010508, intron 2 of 10) 6871 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-8 chr5 96209588 96209913 + 0.380101753845076 NA promoter-TSS (NM_053158) promoter-TSS (NM_053158) -365 NM_001039084 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-3 chr12 35294157 35294709 + 0.380101753845076 NA Intergenic T-rich|Low_complexity|Low_complexity -99536 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-13 chr6 82751784 82752216 + 0.380101753845076 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 22454 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-10 chr7 141539403 141539755 + 0.380101753845076 NA intron (NM_026522, intron 1 of 10) intron (NM_026522, intron 1 of 10) 278 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-17 chrX 104483189 104483832 + 0.380101753845076 NA intron (NM_001081189, intron 1 of 6) intron (NM_001081189, intron 1 of 6) 728 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076 chr11 45955224 45955520 + 0.380101753845076 NA promoter-TSS (NM_001290737) promoter-TSS (NM_001290737) 131 NM_001080969 66628 Mm.269083 NM_001080969 ENSMUSG00000011254 Thg1l - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-14 chr7 90094041 90094412 + 0.380101753845076 NA Intergenic Intergenic 35248 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-12 chr5 145166737 145167031 + 0.380101753845076 NA promoter-TSS (NM_001291248) promoter-TSS (NM_001291248) 220 NM_133735 71799 Mm.277413 NM_133735 ENSMUSG00000029624 Ptcd1 1110069M14Rik pentatricopeptide repeat domain 1 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-4 chr13 64379638 64380245 + 0.380101753845076 NA Intergenic Intergenic -9421 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-11 chr5 137109229 137109619 + 0.380101753845076 NA Intergenic Intergenic 6783 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-5 chr17 79711681 79712120 + 0.380101753845076 NA intron (NM_009994, intron 2 of 2) intron (NM_009994, intron 2 of 2) 3141 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076 chr15 76710121 76710440 + 0.380101753845076 NA promoter-TSS (NM_145471) promoter-TSS (NM_145471) 279 NM_058214 79456 Mm.18373 NM_058214 ENSMUSG00000033762 Recql4 RecQ4 RecQ protein-like 4 protein-coding unique_peak2_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-5 chr4 106958703 106959102 + 0.380101753845076 NA intron (NM_001355532, intron 1 of 14) intron (NM_001355532, intron 1 of 14) 35717 NM_001355532 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_23_24_-0.332980543329475_4.47736591810999_0.380101753845076-7 chr4 47311132 47311662 + 0.380101753845076 NA intron (NM_009928, intron 39 of 39) intron (NM_009928, intron 39 of 39) -41825 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak2_112_84_0.12093176552255_6.46985681889898_0.380019842223465 chr19 4625395 4626225 + 0.380019842223465 NA promoter-TSS (NM_023131) promoter-TSS (NM_023131) -193 NM_023131 19671 Mm.391143 NM_023131 ENSMUSG00000024889 Rce1 D19Ertd283e|D19Ertd98e Ras converting CAAX endopeptidase 1 protein-coding common_peak2_111_84_0.108198198507734_6.46349003539157_0.380019842223465 chr14 20148415 20149473 + 0.380019842223465 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 32838 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_111_84_0.108198198507734_6.46349003539157_0.380019842223465 chr6 125096196 125098109 + 0.380019842223465 NA TTS (NR_106012) TTS (NR_106012) 128 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak1_235_204_-0.0941889733292554_7.63238561284082_0.380004718062476 chr13 5843672 5846373 + 0.380004718062476 NA Intergenic Intergenic 13070 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_196_172_-0.108089865562049_7.3805832948557_0.379947703391351 chr7 116442715 116445321 + 0.379947703391351 NA promoter-TSS (NM_011083) promoter-TSS (NM_011083) -560 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak1_86_64_0.133380810576266_6.08905821831659_0.379881757498728-2 chr19 45748949 45749686 + 0.379881757498728 NA TTS (NR_151594) TTS (NR_151594) 246 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding common_peak2_77_71_-0.170606204332988_6.08462189927582_0.379881757498728-3 chr19 5388132 5388645 + 0.379881757498728 NA promoter-TSS (NR_033224) promoter-TSS (NR_033224) 52 NR_033224 414115 Mm.483102 NR_033224 D330050I16Rik - RIKEN cDNA D330050I16 gene ncRNA common_peak2_77_71_-0.170606204332988_6.08462189927582_0.379881757498728 chr1 119525907 119526854 + 0.379881757498728 NA 5' UTR (NM_146103, exon 1 of 1) 5' UTR (NM_146103, exon 1 of 1) 226 NM_146103 226351 Mm.439806 NM_146103 ENSMUSG00000098923 Tmem185b 2500001K11Rik transmembrane protein 185B protein-coding common_peak1_86_64_0.133380810576266_6.08905821831659_0.379881757498728-3 chr2 143914374 143915411 + 0.379881757498728 NA promoter-TSS (NM_019771) promoter-TSS (NM_019771) -439 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak2_77_71_-0.170606204332988_6.08462189927582_0.379881757498728-5 chr8 25840062 25840812 + 0.379881757498728 NA promoter-TSS (NM_001286207) promoter-TSS (NM_001286207) 20 NM_001286207 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ASH2 like histone lysine methyltransferase complex subunit protein-coding common_peak1_77_71_-0.170606204332988_6.08462189927582_0.379881757498728 chr4 44233628 44234844 + 0.379881757498728 NA Intergenic CpG -12969 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA common_peak2_86_64_0.133380810576266_6.08905821831659_0.379881757498728 chr19 44755168 44756057 + 0.379881757498728 NA Intergenic CpG -1782 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_77_71_-0.170606204332988_6.08462189927582_0.379881757498728-4 chr4 155623841 155624631 + 0.379881757498728 NA promoter-TSS (NM_001347308) promoter-TSS (NM_001347308) 519 NR_040441 100502734 Mm.306018 NR_040441 ENSMUSG00000086682 Gm16023 - predicted gene 16023 ncRNA common_peak2_77_71_-0.170606204332988_6.08462189927582_0.379881757498728-2 chr1 183114088 183114982 + 0.379881757498728 NA intron (NM_001278218, intron 3 of 8) intron (NM_001278218, intron 3 of 8) 33022 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak1_86_64_0.133380810576266_6.08905821831659_0.379881757498728 chr15 77889538 77890079 + 0.379881757498728 NA Intergenic Intergenic 39186 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-4 chr14 8172437 8172874 + 0.379775532323854 NA intron (NM_024221, intron 2 of 9) CpG 337 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding unique_peak1_38_37_-0.241553736761016_5.12715064506308_0.379775532323854 chr4 129640054 129640604 + 0.379775532323854 NA exon (NM_001199695, exon 2 of 11) exon (NM_001199695, exon 2 of 11) 476 NM_001005506 109658 Mm.268863 NM_001005506 ENSMUSG00000053841 Txlna 2600010N21Rik|AI425952|AW209241|Il14|Txln taxilin alpha protein-coding common_peak1_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-3 chr14 25495528 25496097 + 0.379775532323854 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 36627 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-10 chr7 110122644 110123574 + 0.379775532323854 NA intron (NM_009516, intron 1 of 10) intron (NM_009516, intron 1 of 10) 1050 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-5 chr15 8445907 8446507 + 0.379775532323854 NA Intergenic Intergenic -1744 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-6 chr15 38939007 38939380 + 0.379775532323854 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 5284 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_38_37_-0.241553736761016_5.12715064506308_0.379775532323854 chr10 108447326 108447933 + 0.379775532323854 NA Intergenic Intergenic 115440 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-3 chr13 15665609 15666164 + 0.379775532323854 NA intron (NM_008130, intron 10 of 14) intron (NM_008130, intron 10 of 14) 136744 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854 chr1 74661809 74662308 + 0.379775532323854 NA intron (NM_001014974, intron 1 of 19) CpG 304 NM_001014974 67534 Mm.260714 NM_001014974 ENSMUSG00000033257 Ttll4 4632407P03Rik|AI451681|mKIAA0173 tubulin tyrosine ligase-like family, member 4 protein-coding common_peak1_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-2 chr12 16034712 16035458 + 0.379775532323854 NA Intergenic Intergenic -218300 NM_144551 217410 Mm.491136 NM_144551 ENSMUSG00000020601 Trib2 AW319517|TRB-2|TRB2 tribbles pseudokinase 2 protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-7 chr18 52528023 52528437 + 0.379775532323854 NA intron (NM_001286182, intron 3 of 7) intron (NM_001286182, intron 3 of 7) 1491 NM_001286181 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-9 chr3 144680207 144680674 + 0.379775532323854 NA Intergenic Intergenic 39895 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-4 chr15 97963684 97964045 + 0.379775532323854 NA promoter-TSS (NM_001252153) promoter-TSS (NM_001252153) -365 NM_001356508 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-8 chr2 140101041 140101775 + 0.379775532323854 NA Intergenic Intergenic -34603 NR_110351 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak2_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-2 chr11 104607942 104608568 + 0.379775532323854 NA intron (NM_016780, intron 1 of 14) CpG 255 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_38_37_-0.241553736761016_5.12715064506308_0.379775532323854-5 chr3 37885952 37886680 + 0.379775532323854 NA Intergenic Intergenic -12497 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-4 chr3 144664567 144664966 + 0.379775532323848 NA Intergenic Intergenic 55569 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_44_32_0.166974028068131_5.12788113339252_0.379775532323848-5 chr8 31187376 31187796 + 0.379775532323848 NA intron (NM_001286425, intron 1 of 3) intron (NM_001286425, intron 1 of 3) 255 NM_001286425 171167 Mm.334477 NM_134161 ENSMUSG00000046152 Fut10 fuc-TX|fut10A fucosyltransferase 10 protein-coding common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-8 chr9 75193751 75194200 + 0.379775532323848 NA exon (NM_010864, exon 31 of 41) exon (NM_010864, exon 31 of 41) -38039 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-7 chr7 82406008 82406771 + 0.379775532323848 NA intron (NM_001190374, intron 3 of 29) intron (NM_001190374, intron 3 of 29) 70695 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_44_32_0.166974028068131_5.12788113339252_0.379775532323848-4 chr5 64160357 64160984 + 0.379775532323848 NA intron (NM_019636, intron 1 of 19) intron (NM_019636, intron 1 of 19) 410 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-6 chr5 135962914 135963516 + 0.379775532323848 NA exon (NM_001160366, exon 9 of 11) exon (NM_001160366, exon 9 of 11) 11261 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-3 chr13 113403197 113403755 + 0.379775532323848 NA Intergenic Intergenic 99368 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848 chr13 31166854 31167509 + 0.379775532323848 NA Intergenic Intergenic 73905 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA common_peak2_44_32_0.166974028068131_5.12788113339252_0.379775532323848-3 chr2 26915910 26916284 + 0.379775532323848 NA promoter-TSS (NM_013678) promoter-TSS (NM_013678) -324 NM_013678 20931 Mm.389260 NM_013678 ENSMUSG00000014873 Surf2 Surf-2 surfeit gene 2 protein-coding common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-5 chr5 113874691 113875186 + 0.379775532323848 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 33768 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_44_32_0.166974028068131_5.12788113339252_0.379775532323848-2 chr13 54610917 54611247 + 0.379775532323848 NA exon (NM_001347512, exon 1 of 6) exon (NM_001347512, exon 1 of 6) 291 NM_028870 74325 Mm.290026 NM_028870 ENSMUSG00000047547 Cltb 2310046E19Rik|lcb clathrin, light polypeptide (Lcb) protein-coding common_peak2_44_32_0.166974028068131_5.12788113339252_0.379775532323848 chr11 96978074 96978564 + 0.379775532323848 NA promoter-TSS (NM_001080964) promoter-TSS (NM_001080964) -631 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_44_32_0.166974028068131_5.12788113339252_0.379775532323848-2 chr14 60251643 60252103 + 0.379775532323848 NA promoter-TSS (NM_170591) promoter-TSS (NM_170591) -394 NM_001362439 71844 Mm.258051 NM_170591 ENSMUSG00000114797 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak1_174_133_0.0908137416954222_7.11149606130548_0.379723755049011 chr12 111758492 111760117 + 0.379723755049011 NA intron (NM_001361610, intron 1 of 14) CpG 436 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak2_162_143_-0.114782011717888_7.11253399558337_0.379723755049011 chr17 84510767 84512700 + 0.379723755049011 NA promoter-TSS (NM_177606) promoter-TSS (NM_177606) -162 NM_001357986 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding common_peak2_236_205_-0.095152238253732_7.63892440805635_0.379607739530833 chr8 86883565 86885674 + 0.379607739530833 NA intron (NM_030563, intron 1 of 6) CpG 639 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-17 chr18 65430286 65430627 + 0.379391706698377 NA promoter-TSS (NM_172833) promoter-TSS (NM_172833) -541 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-23 chr6 137754628 137754875 + 0.379391706698377 NA intron (NM_172733, intron 1 of 8) intron (NM_172733, intron 1 of 8) 174 NM_172733 232449 Mm.29181 NM_172733 ENSMUSG00000030225 Dera 2010002D22Rik|2500002K03Rik|DEOC deoxyribose-phosphate aldolase (putative) protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-12 chr17 42580516 42580813 + 0.379391706698377 NA exon (NM_181753, exon 5 of 7) exon (NM_181753, exon 5 of 7) 30649 NM_181753 353344 Mm.184937 NM_181753 ENSMUSG00000043972 Opn5 Gpr136|Neuropsin|PGR12|TMEM13 opsin 5 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-6 chr10 93424125 93424346 + 0.379391706698377 NA Intergenic Intergenic -8872 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-5 chr14 70159979 70160400 + 0.379391706698377 NA promoter-TSS (NM_001004155) promoter-TSS (NM_001004155) -687 NM_001004155 268759 Mm.12148 NM_001004155 ENSMUSG00000044551 9930012K11Rik - RIKEN cDNA 9930012K11 gene protein-coding unique_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-4 chr7 121981416 121981608 + 0.379391706698377 NA exon (NM_001033318, exon 1 of 17) exon (NM_001033318, exon 1 of 17) 181 NM_001033318 233824 Mm.442015 NM_001033318 ENSMUSG00000034951 Cog7 5630400E24Rik|Gm167 component of oligomeric golgi complex 7 protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-3 chr15 77836867 77837112 + 0.379391706698377 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 5186 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-19 chr3 65302429 65302719 + 0.379391706698377 NA intron (NM_001357358, intron 6 of 13) intron (NM_001357358, intron 6 of 13) 111 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-17 chr9 116368741 116368940 + 0.379391706698377 NA Intergenic Intergenic 179660 NR_152204 100043817 Mm.404276 NR_152204 Gm4668 - predicted gene 4668 ncRNA common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-14 chr7 84504371 84504571 + 0.379391706698377 NA Intergenic Intergenic -24483 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-6 chr3 101069830 101070084 + 0.379391706698377 NA intron (NM_011197, intron 4 of 8) intron (NM_011197, intron 4 of 8) 40209 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-6 chr13 21717777 21718064 + 0.379391706698377 NA exon (NM_178206, exon 1 of 1) exon (NM_178206, exon 1 of 1) 292 NM_178206 319152 Mm.377874 NM_178206 ENSMUSG00000101355 Hist1h3h H3-291 histone cluster 1, H3h protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-21 chr5 96210390 96210648 + 0.379391706698377 NA intron (NM_001039084, intron 1 of 6) intron (NM_001039084, intron 1 of 6) 404 NM_053158 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-2 chr1 43234811 43235129 + 0.379391706698377 NA Intergenic Intergenic -38209 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-15 chr2 84548427 84548650 + 0.379391706698377 NA Intergenic Intergenic -41665 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-11 chr15 37442632 37442853 + 0.379391706698377 NA intron (NM_001359845, intron 4 of 6) intron (NM_001359845, intron 4 of 6) -10078 NR_045283 100503538 Mm.445166 NR_045283 ENSMUSG00000086992 Gm15941 - predicted gene 15941 ncRNA common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-25 chr9 40748440 40748777 + 0.379391706698377 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) -52665 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-6 chr14 121822083 121822314 + 0.379391706698377 NA Intergenic Intergenic -24464 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-3 chr1 183144349 183144550 + 0.379391706698377 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 3108 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-4 chr10 77081917 77082272 + 0.379391706698377 NA intron (NM_001109991, intron 5 of 40) intron (NM_001109991, intron 5 of 40) 31611 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-26 chr6 12749232 12749478 + 0.379391706698377 NA promoter-TSS (NM_001164805) promoter-TSS (NM_001164805) -102 NM_001164805 330267 Mm.11989 NM_001164805 ENSMUSG00000032625 Thsd7a Gm837 thrombospondin, type I, domain containing 7A protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-31 chr8 111782861 111783260 + 0.379391706698377 NA intron (NM_011801, intron 5 of 6) intron (NM_011801, intron 5 of 6) -39211 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-16 chr9 64811499 64811783 + 0.379391706698377 NA intron (NM_001162917, intron 2 of 34) CpG-15087 630 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding unique_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377 chr5 115008050 115008325 + 0.379391706698377 NA Intergenic Intergenic -3337 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-5 chr2 6164236 6164516 + 0.379391706698377 NA Intergenic Intergenic -28875 NR_040333 320132 Mm.445891 NR_040333 ENSMUSG00000087125 A230108P19Rik - RIKEN cDNA A230108P19 gene ncRNA unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-11 chr15 86168070 86168369 + 0.379391706698377 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) -17509 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-5 chr19 18766801 18767006 + 0.379391706698377 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 16920 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-27 chr6 34743011 34743387 + 0.379391706698377 NA intron (NM_145575, intron 2 of 11) intron (NM_145575, intron 2 of 11) 33755 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-22 chr6 72520007 72520369 + 0.379391706698377 NA Intergenic Intergenic -24203 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-7 chr11 80532994 80533311 + 0.379391706698377 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -24046 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377 chr1 118628101 118628337 + 0.379391706698377 NA intron (NM_023755, intron 1 of 14) CpG 274 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-9 chr13 104448948 104449227 + 0.379391706698377 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 161252 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-3 chr4 83380080 83380276 + 0.379391706698377 NA intron (NR_045450, intron 2 of 2) MERVL_2A-int|LTR|ERVL 10490 NR_045450 790913 Mm.406752 NR_045450 ENSMUSG00000086321 Gm11413 - predicted gene 11413 ncRNA unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-19 chr3 121375627 121375875 + 0.379391706698377 NA Intergenic Intergenic -50790 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-5 chr10 80156662 80157014 + 0.379391706698377 NA 3' UTR (NM_021565, exon 9 of 9) 3' UTR (NM_021565, exon 9 of 9) 7156 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-2 chr11 78876453 78876728 + 0.379391706698377 NA Intergenic Intergenic -44197 NM_010927 18126 Mm.2893 NM_010927 ENSMUSG00000020826 Nos2 MAC-NOS|NOS-II|Nos-2|Nos2a|i-NOS|iNOS nitric oxide synthase 2, inducible protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-12 chrX 6409450 6409710 + 0.379391706698377 NA intron (NM_001040459, intron 1 of 8) intron (NM_001040459, intron 1 of 8) -6162 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-32 chr8 126854707 126854958 + 0.379391706698377 NA Intergenic Intergenic 5812 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-24 chr7 16451911 16452225 + 0.379391706698377 NA promoter-TSS (NM_026938) promoter-TSS (NM_026938) -711 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377 chr1 71865956 71866178 + 0.379391706698377 NA Intergenic Intergenic -22045 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-26 chr8 46901535 46901758 + 0.379391706698377 NA Intergenic Intergenic -85241 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-9 chr17 7101084 7101295 + 0.379391706698377 NA Intergenic Intergenic -68926 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-2 chr1 182593042 182593234 + 0.379391706698377 NA intron (NM_130890, intron 2 of 20) intron (NM_130890, intron 2 of 20) 28131 NM_130890 170725 Mm.189201 NM_130890 ENSMUSG00000038599 Capn8 nCL-2|nCL-2' calpain 8 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-14 chr2 32713990 32714290 + 0.379391706698377 NA Intergenic Intergenic -1168 NR_039536 100628606 NR_039536 ENSMUSG00000105841 Mir3960 mmu-mir-3960 microRNA 3960 ncRNA unique_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-2 chr8 94289532 94289787 + 0.379391706698377 NA intron (NM_001357268, intron 3 of 20) intron (NM_001357268, intron 3 of 20) 21053 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-3 chr11 98027722 98028028 + 0.379391706698377 NA exon (NM_001159483, exon 2 of 6) exon (NM_001159483, exon 2 of 6) 951 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-17 chr2 4501041 4501320 + 0.379391706698377 NA intron (NM_001177843, intron 5 of 23) RSINE1|SINE|B4 -58574 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-3 chr11 115627815 115628027 + 0.379391706698377 NA intron (NM_001252384, intron 1 of 7) CpG 374 NM_001252394 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377 chr1 59429991 59430202 + 0.379391706698377 NA Intergenic Intergenic -52051 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding unique_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-2 chr16 92907174 92907378 + 0.379391706698377 NA Intergenic Intergenic -81202 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-6 chr11 16818883 16819185 + 0.379391706698377 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 66831 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-10 chr4 109433062 109433288 + 0.379391706698377 NA intron (NM_001145948, intron 12 of 17) intron (NM_001145948, intron 12 of 17) 17528 NM_001145948 230603 Mm.33091 NM_153392 ENSMUSG00000028555 Ttc39a 4922503N01Rik tetratricopeptide repeat domain 39A protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-8 chr15 77821668 77821885 + 0.379391706698377 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 20399 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-4 chr16 28929100 28929315 + 0.379391706698377 NA intron (NM_177718, intron 1 of 1) CpG 491 NM_177718 239796 Mm.155887 NM_177718 ENSMUSG00000051065 Mb21d2 1600021P15Rik|A430031N04|C87006 Mab-21 domain containing 2 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-8 chr13 24937463 24937715 + 0.379391706698377 NA promoter-TSS (NM_172532) promoter-TSS (NM_172532) 72 NM_172532 214579 Mm.393311 NM_172532 ENSMUSG00000035936 Aldh5a1 6330403E24Rik|Ahd-1|Ahd1|D630032B01Rik|SSADH|Ssdh1 aldhehyde dehydrogenase family 5, subfamily A1 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-23 chr7 102442157 102442376 + 0.379391706698377 NA intron (NM_009103, intron 1 of 18) intron (NM_009103, intron 1 of 18) 571 NM_009103 20133 Mm.197486 NM_009103 ENSMUSG00000030978 Rrm1 RnrM1 ribonucleotide reductase M1 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-4 chr10 80039307 80039554 + 0.379391706698377 NA intron (NM_025554, intron 1 of 6) intron (NM_025554, intron 1 of 6) 229 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-7 chr15 27784991 27785260 + 0.379391706698377 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -103583 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-10 chrX 140521768 140522142 + 0.379391706698377 NA Intergenic Intergenic 20713 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-11 chr2 129197043 129197439 + 0.379391706698377 NA Intergenic Intergenic -1532 NM_015747 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377 chr1 72401444 72401707 + 0.379391706698377 NA Intergenic Intergenic 94154 NM_001357519 22596 Mm.246952 NM_009533 ENSMUSG00000026187 Xrcc5 AI314015|CTC85|CTCBF|Ku80|Ku86 X-ray repair complementing defective repair in Chinese hamster cells 5 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-3 chr11 32564172 32564480 + 0.379391706698377 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 31060 NM_001359177 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-20 chr4 70921791 70922038 + 0.379391706698377 NA Intergenic Intergenic -386986 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-15 chr17 27131749 27132199 + 0.379391706698377 NA intron (NM_026063, intron 1 of 3) intron (NM_026063, intron 1 of 3) 1917 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-21 chr5 148563501 148563836 + 0.379391706698377 NA Intergenic Intergenic -10880 NM_001359199 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-12 chr15 58890280 58890651 + 0.379391706698377 NA 3' UTR (NM_175151, exon 12 of 12) 3' UTR (NM_175151, exon 12 of 12) 1236 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-34 chrX 7187458 7187749 + 0.379391706698377 NA intron (NM_001243762, intron 3 of 13) intron (NM_001243762, intron 3 of 13) 1111 NM_016691 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-2 chr1 165194772 165195019 + 0.379391706698377 NA promoter-TSS (NM_145512) promoter-TSS (NM_145512) -457 NR_151712 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-15 chr17 78350925 78351248 + 0.379391706698377 NA intron (NM_015800, intron 12 of 16) intron (NM_015800, intron 12 of 16) 67066 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-29 chr6 145210257 145210590 + 0.379391706698377 NA promoter-TSS (NM_133688) promoter-TSS (NM_133688) 547 NM_177222 320662 Mm.207779 NM_177222 ENSMUSG00000043541 Casc1 A230084G12Rik|Las1 cancer susceptibility candidate 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-23 chr5 73491732 73492083 + 0.379391706698377 NA intron (NM_178896, intron 1 of 10) CpG 881 NM_178896 100737 Mm.220312 NM_178896 ENSMUSG00000051674 Dcun1d4 AI836376 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-30 chr8 3221462 3221685 + 0.379391706698377 NA intron (NM_001330056, intron 2 of 21) intron (NM_001330056, intron 2 of 21) 58044 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-5 chr10 80033916 80034161 + 0.379391706698377 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) 5621 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-22 chr6 113068362 113068646 + 0.379391706698377 NA TTS (NM_001355266) TTS (NM_001355266) 8740 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-14 chr16 92826691 92826960 + 0.379391706698377 NA promoter-TSS (NM_001111021) promoter-TSS (NM_001111021) -751 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-8 chr5 92205600 92205818 + 0.379391706698377 NA Intergenic Intergenic 9699 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377 chr1 131512563 131512905 + 0.379391706698377 NA intron (NM_001081011, intron 2 of 22) intron (NM_001081011, intron 2 of 22) 14627 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-24 chr7 143690581 143690837 + 0.379391706698377 NA intron (NM_001199227, intron 21 of 21) intron (NM_001199227, intron 21 of 21) -4834 NR_131763 79201 Mm.290780 NM_024290 ENSMUSG00000037613 Tnfrsf23 SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB tumor necrosis factor receptor superfamily, member 23 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-10 chr15 78611134 78611515 + 0.379391706698377 NA intron (NM_028195, intron 7 of 12) intron (NM_028195, intron 7 of 12) 14277 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-19 chr3 121634105 121634328 + 0.379391706698377 NA TTS (NR_036456) TTS (NR_036456) 9269 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-28 chr6 135048761 135048966 + 0.379391706698377 NA Intergenic Intergenic -16799 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-8 chr11 96304773 96304984 + 0.379391706698377 NA intron (NM_008268, intron 1 of 1) intron (NM_008268, intron 1 of 1) 1366 NM_008268 15413 Mm.207 NM_008268 ENSMUSG00000038700 Hoxb5 AI385717|Hox-2.1 homeobox B5 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-30 chr9 50745627 50745869 + 0.379391706698377 NA intron (NM_025865, intron 1 of 3) intron (NM_025865, intron 1 of 3) 773 NM_025865 66952 Mm.273375 NM_025865 ENSMUSG00000032062 2310030G06Rik 2610024D04Rik|AV017521 RIKEN cDNA 2310030G06 gene protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-20 chr3 128788421 128788629 + 0.379391706698377 NA Intergenic Intergenic -411353 NM_001286942 18741 Mm.246804 NM_011098 ENSMUSG00000028023 Pitx2 9430085M16Rik|Brx1|Brx1b|Munc30|Otlx2|Ptx2|Rieg paired-like homeodomain transcription factor 2 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-14 chr15 80914206 80914498 + 0.379391706698377 NA intron (NM_177124, intron 15 of 21) B1_Mus1|SINE|Alu -25687 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-9 chr5 151054977 151055179 + 0.379391706698377 NA intron (NR_153382, intron 7 of 13) intron (NR_153382, intron 7 of 13) 102471 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-29 chr9 44906210 44906591 + 0.379391706698377 NA Intergenic Intergenic 14342 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-2 chr1 151046415 151046660 + 0.379391706698377 NA Intergenic Intergenic -53102 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-18 chr3 94975528 94975853 + 0.379391706698377 NA intron (NM_001293716, intron 1 of 9) intron (NM_001293716, intron 1 of 9) 959 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-11 chr14 121825034 121825235 + 0.379391706698377 NA Intergenic Intergenic -27400 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-22 chr4 135433486 135433713 + 0.379391706698377 NA intron (NM_022980, intron 1 of 4) CpG 206 NM_022980 53902 Mm.331970 NM_022980 ENSMUSG00000059713 Rcan3 AU041093|Csp3|Dscr1l2 regulator of calcineurin 3 protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-2 chr12 108397826 108398033 + 0.379391706698377 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -12704 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-18 chr2 6267285 6267545 + 0.379391706698377 NA intron (NR_040333, intron 3 of 6) intron (NR_040333, intron 3 of 6) -54421 NM_024208 67856 Mm.38342 NM_024208 ENSMUSG00000039063 Echdc3 2310005D12Rik|AI662097 enoyl Coenzyme A hydratase domain containing 3 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-18 chr2 118765777 118766027 + 0.379391706698377 NA Intergenic Intergenic -3241 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-5 chr11 116103608 116103888 + 0.379391706698377 NA Intergenic Intergenic 6487 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding unique_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-5 chr8 10866066 10866267 + 0.379391706698377 NA Intergenic Intergenic 16288 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-11 chr7 37565783 37566091 + 0.379391706698377 NA intron (NM_172385, intron 4 of 5) intron (NM_172385, intron 4 of 5) 203815 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-3 chr1 89132017 89132242 + 0.379391706698377 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 61714 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-25 chr6 5430192 5430472 + 0.379391706698377 NA intron (NM_001355662, intron 4 of 4) intron (NM_001355662, intron 4 of 4) 39922 NM_001355662 65255 Mm.51340 NM_023048 ENSMUSG00000042607 Asb4 8430401O13Rik|AV117194|AW060255 ankyrin repeat and SOCS box-containing 4 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-26 chrX 113185174 113185387 + 0.379391706698377 NA intron (NM_018818, intron 1 of 14) intron (NM_018818, intron 1 of 14) 235 NM_018818 12662 Mm.257316 NM_018818 ENSMUSG00000025531 Chm Rep-1 choroidermia (RAB escort protein 1) protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-32 chr9 77545723 77545974 + 0.379391706698377 NA promoter-TSS (NM_001146048) promoter-TSS (NM_001146048) -996 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-9 chr4 34225849 34226129 + 0.379391706698377 NA Intergenic Intergenic -175922 NM_026293 67652 Mm.55848 NM_026293 ENSMUSG00000028264 Spaca1 1700124L11Rik|4930540L03Rik sperm acrosome associated 1 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-10 chr14 118709409 118709615 + 0.379391706698377 NA Intergenic ID4_|SINE|ID -3293 NM_001033336 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-12 chr16 4420047 4420282 + 0.379391706698377 NA 5' UTR (NM_001291910, exon 1 of 12) 5' UTR (NM_001291910, exon 1 of 12) 334 NM_001291910 11515 Mm.439750 NM_009624 ENSMUSG00000005580 Adcy9 AC9|ACtp10|AW125421|D16Wsu65e|mKIAA0520 adenylate cyclase 9 protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-6 chr4 89126747 89126970 + 0.379391706698377 NA intron (NR_151607, intron 1 of 3) intron (NR_151607, intron 1 of 3) 1368 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-31 chr9 61668490 61668842 + 0.379391706698377 NA Intergenic Intergenic 245844 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-4 chr11 108215197 108215453 + 0.379391706698377 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 128563 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-10 chr18 4514234 4514442 + 0.379391706698377 NA Intergenic Intergenic -120591 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-13 chr15 76078908 76079178 + 0.379391706698377 NA intron (NM_028364, intron 1 of 11) intron (NM_028364, intron 1 of 11) 1827 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-21 chr4 130100671 130100977 + 0.379391706698377 NA Intergenic Intergenic -6732 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-10 chr13 113337900 113338236 + 0.379391706698377 NA Intergenic Intergenic 128409 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-33 chr9 123245028 123245313 + 0.379391706698377 NA Intergenic Intergenic 15619 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-25 chr7 37363701 37364127 + 0.379391706698377 NA Intergenic Intergenic 405838 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-17 chr2 113944583 113944795 + 0.379391706698377 NA Intergenic Intergenic -68876 NR_028423 320846 Mm.441458 NR_028423 ENSMUSG00000087694 A530058N18Rik - RIKEN cDNA A530058N18 gene ncRNA unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-27 chr8 105789268 105789598 + 0.379391706698377 NA intron (NM_145824, intron 3 of 13) intron (NM_145824, intron 3 of 13) -30826 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-24 chr5 135703747 135704045 + 0.379391706698377 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 14751 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-8 chr15 37689722 37690071 + 0.379391706698377 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) -9322 NM_001359839 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-13 chr16 89836131 89836363 + 0.379391706698377 NA intron (NM_009384, intron 14 of 27) intron (NM_009384, intron 14 of 27) -17895 NM_001145887 21844 Mm.310902 NM_009384 ENSMUSG00000002489 Tiam1 AI847750|D16Ium10|D16Ium10e T cell lymphoma invasion and metastasis 1 protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-7 chr5 31403190 31403448 + 0.379391706698377 NA Intergenic Intergenic -49117 NM_172993 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-8 chr3 121711578 121711791 + 0.379391706698377 NA Intergenic Intergenic -11853 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-33 chrX 75130539 75130818 + 0.379391706698377 NA intron (NM_008621, intron 1 of 11) intron (NM_008621, intron 1 of 11) 338 NM_008621 17524 Mm.391267 NM_008621 ENSMUSG00000031402 Mpp1 55kDa|C130070C03Rik|p55 membrane protein, palmitoylated protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-9 chr14 20870968 20871365 + 0.379391706698377 NA Intergenic B3|SINE|B2 34504 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-7 chr14 30548587 30548854 + 0.379391706698377 NA promoter-TSS (NM_009388) promoter-TSS (NM_009388) -411 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding unique_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377 chr13 6648397 6648613 + 0.379391706698377 NA intron (NM_019703, intron 1 of 21) intron (NM_019703, intron 1 of 21) 266 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-4 chr14 25506106 25506334 + 0.379391706698377 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -28219 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-13 chr6 91579962 91580171 + 0.379391706698377 NA Intergenic Intergenic 64031 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-7 chr12 111454060 111454267 + 0.379391706698377 NA 3' UTR (NM_009396, exon 12 of 12) 3' UTR (NM_009396, exon 12 of 12) 11502 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-13 chr19 46525050 46525279 + 0.379391706698377 NA Intergenic Intergenic 23516 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_16_11_0.23192333618854_3.70092416881543_0.379391706698377-7 chr3 121618982 121619295 + 0.379391706698377 NA Intergenic Intergenic 24347 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-16 chr18 31931522 31931866 + 0.379391706698377 NA intron (NM_144862, intron 1 of 9) intron (NM_144862, intron 1 of 9) 187 NM_144862 225341 Mm.24551 NM_144862 ENSMUSG00000024395 Lims2 PINCH2 LIM and senescent cell antigen like domains 2 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-4 chr14 27242421 27242810 + 0.379391706698377 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 4605 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-20 chr4 132212465 132212675 + 0.379391706698377 NA promoter-TSS (NM_145393) promoter-TSS (NM_145393) -314 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377 chr1 6289335 6289545 + 0.379391706698377 NA Intergenic ORR1D2|LTR|ERVL-MaLR -69891 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-12 chr4 145272456 145272655 + 0.379391706698377 NA intron (NM_009401, intron 12 of 12) intron (NM_009401, intron 12 of 12) -25685 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-16 chr2 103661907 103662148 + 0.379391706698377 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 95717 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-15 chr8 60792479 60792747 + 0.379391706698377 NA Intergenic Intergenic -97780 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-9 chr15 64104953 64105200 + 0.379391706698377 NA intron (NM_001276461, intron 24 of 28) intron (NM_001276461, intron 24 of 28) -44628 NM_001360037 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak2_12_14_-0.474297441580161_3.66974187481844_0.379391706698377-28 chr8 124137645 124138011 + 0.379391706698377 NA Intergenic Intergenic -93566 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_16_11_0.23192333618854_3.70092416881543_0.379391706698377-16 chr17 35795256 35795566 + 0.379391706698377 NA Intergenic Intergenic 22961 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak1_56_53_-0.204888445390867_5.65244327946803_0.379249973882642-4 chr8 90907699 90908450 + 0.379249973882642 NA intron (NM_177224, intron 2 of 39) CpG -24175 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_64_47_0.153177592914592_5.66155129717845_0.379249973882642-3 chr15 103002127 103002817 + 0.379249973882642 NA Intergenic Intergenic -7090 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding common_peak1_64_47_0.153177592914592_5.66155129717845_0.379249973882642 chr11 88999823 89000588 + 0.379249973882642 NA intron (NM_009546, intron 1 of 8) intron (NM_009546, intron 1 of 8) 802 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642-6 chr5 65436071 65436470 + 0.379249973882642 NA promoter-TSS (NM_009466) promoter-TSS (NM_009466) -428 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak1_56_53_-0.204888445390867_5.65244327946803_0.379249973882642-2 chr18 67985892 67986616 + 0.379249973882642 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 53081 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642-7 chr6 31111529 31112447 + 0.379249973882642 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -48895 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642-2 chr11 4291559 4292674 + 0.379249973882642 NA Intergenic MIRc|SINE|MIR 25320 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_56_53_-0.204888445390867_5.65244327946803_0.379249973882642-3 chr19 6974460 6974939 + 0.379249973882642 NA promoter-TSS (NM_008889) promoter-TSS (NM_008889) -349 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak1_64_47_0.153177592914592_5.66155129717845_0.379249973882642-2 chr6 87224705 87225419 + 0.379249973882642 NA intron (NM_054041, intron 12 of 17) intron (NM_054041, intron 12 of 17) 110713 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding common_peak2_64_47_0.153177592914592_5.66155129717845_0.379249973882642 chr11 106084660 106085353 + 0.379249973882642 NA intron (NM_011947, intron 1 of 15) CpG 104 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak2_56_53_-0.204888445390867_5.65244327946803_0.379249973882642 chr11 59655708 59656209 + 0.379249973882642 NA Intergenic Intergenic -6537 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642-4 chr18 35822825 35823678 + 0.379249973882642 NA Intergenic Intergenic -6537 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642 chr10 25359941 25360495 + 0.379249973882642 NA intron (NM_001358754, intron 1 of 16) CpG 420 NM_001358751 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding common_peak2_63_47_0.130967584350151_5.65044629289623_0.379249973882642-2 chr8 13644441 13644915 + 0.379249973882642 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 32909 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_63_47_0.130967584350151_5.65044629289623_0.379249973882642 chr2 39004642 39005077 + 0.379249973882642 NA exon (NM_025592, exon 2 of 4) exon (NM_025592, exon 2 of 4) 272 NM_025592 66489 Mm.345333 NM_025592 ENSMUSG00000062997 Rpl35 2410039E09Rik ribosomal protein L35 protein-coding common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642-5 chr2 156862423 156862871 + 0.379249973882642 NA promoter-TSS (NM_026124) promoter-TSS (NM_026124) 298 NR_015591 74487 Mm.490465 NR_015591 ENSMUSG00000085741 5430405H02Rik 2610307N17Rik RIKEN cDNA 5430405H02 gene ncRNA common_peak2_64_47_0.153177592914592_5.66155129717845_0.379249973882642-4 chr3 95015767 95016224 + 0.379249973882642 NA promoter-TSS (NM_030074) promoter-TSS (NM_030074) -538 NM_001357863 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak2_56_53_-0.204888445390867_5.65244327946803_0.379249973882642-2 chr19 5940584 5941050 + 0.379249973882642 NA TTS (NM_001164057) TTS (NM_001164057) -16001 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_64_47_0.153177592914592_5.66155129717845_0.379249973882642-5 chr4 126102664 126103158 + 0.379249973882642 NA Intergenic MIRb|SINE|MIR -1046 NM_028800 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_64_47_0.153177592914592_5.66155129717845_0.379249973882642-2 chr12 44209265 44210021 + 0.379249973882642 NA promoter-TSS (NR_049203) promoter-TSS (NR_049203) 425 NM_013760 27362 Mm.27432 NM_013760 ENSMUSG00000014905 Dnajb9 AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7 DnaJ heat shock protein family (Hsp40) member B9 protein-coding common_peak1_63_47_0.130967584350151_5.65044629289623_0.379249973882642-3 chr13 17943532 17944222 + 0.379249973882642 NA intron (NM_019491, intron 1 of 4) CpG 340 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding common_peak1_56_53_-0.204888445390867_5.65244327946803_0.379249973882642 chr17 34961271 34962346 + 0.379249973882642 NA Intergenic B2_Mm1a|SINE|B2 -2570 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding common_peak2_163_144_-0.11600450198774_7.12190683902106_0.379157367625731 chr2 180171551 180172657 + 0.379157367625731 NA exon (NM_019822, exon 2 of 10) exon (NM_019822, exon 2 of 10) 516 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding common_peak2_175_134_0.0882498463997416_7.1209405202507_0.379157367625731 chr5 33335415 33337000 + 0.379157367625731 NA intron (NM_021500, intron 1 of 8) CpG 635 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak2_113_85_0.116679322497259_6.48460441595073_0.379131714100395 chr5 137073912 137075118 + 0.379131714100395 NA Intergenic Intergenic -2243 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak1_113_85_0.116679322497259_6.48460441595073_0.379131714100395-2 chr17 64331272 64331943 + 0.379131714100395 NA intron (NM_001025309, intron 1 of 9) CpG 276 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding common_peak1_113_85_0.116679322497259_6.48460441595073_0.379131714100395 chr11 97805579 97806900 + 0.379131714100395 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 6674 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_103_93_-0.143160636369013_6.48300853349313_0.37913171410037-2 chr9 50751765 50752786 + 0.37913171410037 NA promoter-TSS (NM_001289784) promoter-TSS (NM_001289784) 79 NM_001164708 69253 Mm.1980 NM_024441 ENSMUSG00000038086 Hspb2 27kDa|2810021G24Rik|HSP27|MKBP heat shock protein 2 protein-coding common_peak1_103_93_-0.143160636369013_6.48300853349313_0.37913171410037-2 chr12 27340393 27341650 + 0.37913171410037 NA 3' UTR (NM_009234, exon 1 of 1) 3' UTR (NM_009234, exon 1 of 1) 1697 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_103_93_-0.143160636369013_6.48300853349313_0.37913171410037 chr1 74247960 74249352 + 0.37913171410037 NA intron (NM_001357387, intron 4 of 10) intron (NM_001357387, intron 4 of 10) 12139 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_103_93_-0.143160636369013_6.48300853349313_0.37913171410037 chr2 38823209 38824242 + 0.37913171410037 NA intron (NM_010264, intron 3 of 10) intron (NM_010264, intron 3 of 10) -29010 NR_029568 387176 NR_029568 ENSMUSG00000065423 Mir181a-2 Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a|mir-181a-2 microRNA 181a-2 ncRNA common_peak1_78_72_-0.172256892604741_6.10369611257765_0.378729626038611 chr16 5048832 5049777 + 0.378729626038611 NA promoter-TSS (NM_001356320) promoter-TSS (NM_001356320) 606 NM_001359747 74022 Mm.21652 NM_028720 ENSMUSG00000022536 Glyr1 2810419J22Rik|3930401K13Rik|AW545332|Npac glyoxylate reductase 1 homolog (Arabidopsis) protein-coding common_peak1_78_72_-0.172256892604741_6.10369611257765_0.378729626038611-2 chr2 167765499 167766880 + 0.378729626038611 NA Intergenic Intergenic 75012 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_87_65_0.127726303665362_6.10825727119113_0.378729626038611-2 chr8 72161351 72161799 + 0.378729626038611 NA intron (NM_023126, intron 1 of 7) CpG 375 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak2_78_72_-0.172256892604741_6.10369611257765_0.378729626038611 chr10 80148803 80149413 + 0.378729626038611 NA promoter-TSS (NM_001305799) promoter-TSS (NM_001305799) -574 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak2_87_65_0.127726303665362_6.10825727119113_0.378729626038611 chr11 108342545 108343490 + 0.378729626038611 NA intron (NM_011101, intron 1 of 16) CpG 871 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_78_72_-0.172256892604741_6.10369611257765_0.378729626038611-2 chr16 3884069 3885069 + 0.378729626038611 NA promoter-TSS (NM_029090) promoter-TSS (NM_029090) -50 NM_029090 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|HAT4|Nat15|NatF N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_87_65_0.127726303665362_6.10825727119113_0.378729626038611 chr1 119525621 119526518 + 0.378729626038611 NA promoter-TSS (NM_146103) promoter-TSS (NM_146103) -85 NM_146103 226351 Mm.439806 NM_146103 ENSMUSG00000098923 Tmem185b 2500001K11Rik transmembrane protein 185B protein-coding common_peak2_78_72_-0.172256892604741_6.10369611257765_0.378729626038611-3 chr6 108444256 108445055 + 0.378729626038611 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -45088 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_177_135_0.0937894055763442_7.13435754403851_0.378599076654497 chr8 105636511 105637614 + 0.378599076654497 NA intron (NM_001358924, intron 1 of 11) CpG 288 NR_151743 546100 Mm.471801 NR_151742 ENSMUSG00000098120 Gm5914 - predicted gene 5914 ncRNA common_peak1_164_145_-0.117211634874868_7.13121874144258_0.378599076654497 chr4 64044514 64046845 + 0.378599076654497 NA intron (NM_011607, intron 1 of 25) intron (NM_011607, intron 1 of 25) 1336 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_164_145_-0.117211634874868_7.13121874144258_0.378599076654497-2 chr8 84983476 84984614 + 0.378599076654497 NA Intergenic Intergenic -5297 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_143_109_0.0962415760015567_6.82948050152544_0.378534566199579 chr13 70636812 70638175 + 0.378534566199579 NA intron (NM_144837, intron 1 of 18) CpG 141 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_255_196_0.0797683064684422_7.6619359726906_0.378440397351496 chr3 104863731 104865643 + 0.378440397351496 NA promoter-TSS (NM_001355044) promoter-TSS (NM_001355044) 181 NM_001253702 229681 Mm.206379 NM_153091 ENSMUSG00000045576 St7l St7r suppression of tumorigenicity 7-like protein-coding common_peak2_114_86_0.112511725128161_6.49919935841281_0.378263341903969 chr2 30719567 30720779 + 0.378263341903969 NA Intergenic Intergenic -1037 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_104_94_-0.144718993130933_6.49749611176548_0.378263341903969-2 chr4 44755966 44757352 + 0.378263341903969 NA promoter-TSS (NM_138590) promoter-TSS (NM_138590) 100 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak2_104_94_-0.144718993130933_6.49749611176548_0.378263341903969 chr15 80711400 80712709 + 0.378263341903969 NA intron (NM_144812, intron 1 of 24) CpG 741 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_114_86_0.112511725128161_6.49919935841281_0.378263341903969 chr7 89515290 89516435 + 0.378263341903969 NA intron (NM_001360752, intron 1 of 1) intron (NM_001360752, intron 1 of 1) 1724 NM_029614 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_215_165_0.0833974604067462_7.4167381615503_0.378095611224614 chr8 106210301 106211788 + 0.378095611224614 NA promoter-TSS (NM_001007567) promoter-TSS (NM_001007567) -10 NM_145404 214572 Mm.251804 NM_145404 ENSMUSG00000060098 Prmt7 4933402B05Rik|BC006705 protein arginine N-methyltransferase 7 protein-coding common_peak2_241_209_-0.0929897362630419_7.6677506495346_0.378058953943672 chr3 31094976 31096207 + 0.378058953943672 NA intron (NM_001039090, intron 1 of 6) CpG 533 NM_001271772 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak1_134_119_-0.121741825527725_6.84601968284466_0.377857319997267 chr2 13572203 13573547 + 0.377857319997267 NA Intergenic Intergenic -1436 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak2_145_110_0.102944589642576_6.84588816117139_0.377857319997267 chr3 145892009 145894048 + 0.377857319997267 NA 3' UTR (NM_026993, exon 6 of 6) 3' UTR (NM_026993, exon 6 of 6) -31234 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_57_54_-0.206446692147393_5.67813636745096_0.377714458142987 chr19 4927086 4927913 + 0.377714458142987 NA intron (NM_133803, intron 1 of 17) intron (NM_133803, intron 1 of 17) 471 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-6 chr6 42490495 42491205 + 0.377714458142987 NA Intergenic Intergenic -3636 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak1_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-6 chr9 58109682 58110860 + 0.377714458142987 NA intron (NM_001166282, intron 3 of 19) intron (NM_001166282, intron 3 of 19) -7974 NM_001311085 382077 Mm.335193 NM_029212 ENSMUSG00000037716 Ccdc33 4930535E21Rik|Gm1117|Tzip1 coiled-coil domain containing 33 protein-coding common_peak1_58_54_-0.18195862820198_5.69038039942367_0.377714458142987 chr11 72441450 72442127 + 0.377714458142987 NA intron (NM_016776, intron 2 of 25) intron (NM_016776, intron 2 of 25) 461 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding common_peak1_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-2 chr13 34096334 34097110 + 0.377714458142987 NA intron (NR_046184, intron 2 of 4) intron (NR_046184, intron 2 of 4) 16550 NR_046184 432745 Mm.159104 NR_046184 ENSMUSG00000113591 4930447K03Rik - RIKEN cDNA 4930447K03 gene ncRNA common_peak1_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-4 chr4 66336567 66337564 + 0.377714458142987 NA intron (NM_207109, intron 1 of 22) intron (NM_207109, intron 1 of 22) 67418 NM_019514 56079 Mm.445312 NM_019514 ENSMUSG00000028373 Astn2 1d8|Astnl|bM452J22.1 astrotactin 2 protein-coding common_peak2_65_48_0.145301160709306_5.68736042446986_0.377714458142987-2 chr18 49832727 49833524 + 0.377714458142987 NA exon (NM_001081371, exon 1 of 43) exon (NM_001081371, exon 1 of 43) 128 NM_001081371 240283 Mm.257790 NM_001081371 ENSMUSG00000037416 Dmxl1 C630007L23Rik|D030030C22 Dmx-like 1 protein-coding common_peak1_57_54_-0.206446692147393_5.67813636745096_0.377714458142987 chr11 74831209 74831844 + 0.377714458142987 NA intron (NM_010813, intron 1 of 5) CpG-2219 602 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-3 chr5 135961727 135962302 + 0.377714458142987 NA intron (NM_001160366, intron 9 of 10) intron (NM_001160366, intron 9 of 10) 12462 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak2_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-3 chr5 53998438 53999241 + 0.377714458142987 NA 5' UTR (NM_001081103, exon 1 of 12) 5' UTR (NM_001081103, exon 1 of 12) 316 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987 chr12 54795048 54795699 + 0.377714458142987 NA intron (NM_026998, intron 2 of 13) CpG 289 NM_026998 72183 Mm.28240 NM_026998 ENSMUSG00000005656 Snx6 2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963 sorting nexin 6 protein-coding common_peak1_65_48_0.145301160709306_5.68736042446986_0.377714458142987 chr19 41895426 41896140 + 0.377714458142987 NA intron (NM_199447, intron 1 of 33) intron (NM_199447, intron 1 of 33) 370 NM_199447 107094 Mm.276044 NM_199447 ENSMUSG00000035049 Rrp12 AA408556|AA536972|mKIAA0690 ribosomal RNA processing 12 homolog (S. cerevisiae) protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-3 chr15 84987308 84987816 + 0.377714458142987 NA intron (NM_001033273, intron 1 of 9) CpG 409 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding common_peak1_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-5 chr8 124897109 124897679 + 0.377714458142987 NA promoter-TSS (NM_001111141) promoter-TSS (NM_001111141) 311 NM_198103 102058 Mm.347360 NM_198103 ENSMUSG00000074030 Exoc8 AI414418|EXO84|Exo84p|R74783|SEC84 exocyst complex component 8 protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-5 chr3 60502671 60503825 + 0.377714458142987 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 2069 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-2 chr12 69986397 69987075 + 0.377714458142987 NA exon (NM_022028, exon 1 of 5) exon (NM_022028, exon 1 of 5) 266 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-4 chr19 57199749 57200870 + 0.377714458142987 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) -2678 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_65_48_0.145301160709306_5.68736042446986_0.377714458142987 chr1 13659425 13660458 + 0.377714458142987 NA intron (NM_145381, intron 1 of 6) intron (NM_145381, intron 1 of 6) 568 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak2_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-7 chr8 3631123 3631882 + 0.377714458142987 NA intron (NM_001357168, intron 1 of 18) intron (NM_001357168, intron 1 of 18) 393 NM_011503 20911 Mm.7247 NM_011503 ENSMUSG00000004626 Stxbp2 C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1 syntaxin binding protein 2 protein-coding common_peak1_58_54_-0.18195862820198_5.69038039942367_0.377714458142987-2 chr11 86959082 86959400 + 0.377714458142987 NA intron (NM_001005341, intron 2 of 4) intron (NM_001005341, intron 2 of 4) 34521 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding common_peak1_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-3 chr15 84987320 84987834 + 0.377714458142987 NA intron (NM_001033273, intron 1 of 9) CpG 394 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding common_peak2_57_54_-0.206446692147393_5.67813636745096_0.377714458142987-2 chr3 32510648 32511091 + 0.377714458142987 NA intron (NM_001356625, intron 1 of 6) CpG 277 NM_144519 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding common_peak2_79_73_-0.173866381803764_6.12252017472707_0.377610692194725-2 chr12 100110205 100111192 + 0.377610692194725 NA Intergenic L2a|LINE|L2 -1633 NM_008947 19179 Mm.157105 NM_008947 ENSMUSG00000021178 Psmc1 AI325227|P26s4|Rpt2/S4|S4|rpt2 protease (prosome, macropain) 26S subunit, ATPase 1 protein-coding common_peak2_80_73_-0.156070912501336_6.13141790937828_0.377610692194725 chr4 136140654 136141332 + 0.377610692194725 NA Intergenic L3b|LINE|CR1 -2829 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_79_73_-0.173866381803764_6.12252017472707_0.377610692194725-3 chr13 24565619 24566448 + 0.377610692194725 NA Intergenic Intergenic -16156 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak1_88_66_0.122218035942155_6.12719820842885_0.377610692194725 chr5 32196802 32197921 + 0.377610692194725 NA Intergenic MER94|DNA|hAT-Blackjack -35347 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_79_73_-0.173866381803764_6.12252017472707_0.377610692194725 chr16 93603588 93604564 + 0.377610692194725 NA promoter-TSS (NM_145482) promoter-TSS (NM_145482) -261 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding common_peak2_79_73_-0.173866381803764_6.12252017472707_0.377610692194725 chr11 72441094 72442230 + 0.377610692194725 NA intron (NM_016776, intron 1 of 25) intron (NM_016776, intron 1 of 25) 335 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding common_peak2_88_66_0.122218035942155_6.12719820842885_0.377610692194725 chr17 31658137 31658776 + 0.377610692194725 NA intron (NM_024187, intron 1 of 7) CpG 298 NM_024187 108121 Mm.379289 NM_024187 ENSMUSG00000061613 U2af1 2010107D16Rik U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 protein-coding common_peak2_333_285_-0.0770539443250886_8.12134436461584_0.377586394603031 chr3 146498983 146501273 + 0.377586394603031 NA promoter-TSS (NM_027617) promoter-TSS (NM_027617) 292 NM_010318 14707 Mm.140804 NM_010318 ENSMUSG00000068523 Gng5 G(y)5 guanine nucleotide binding protein (G protein), gamma 5 protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376 chr1 6214150 6214486 + 0.377553616161376 NA promoter-TSS (NM_009826) promoter-TSS (NM_009826) -344 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-5 chr14 47276979 47277355 + 0.377553616161376 NA promoter-TSS (NM_172598) promoter-TSS (NM_172598) 24 NM_080843 67296 Mm.23957 NM_080843 ENSMUSG00000048379 Socs4 3110032M18Rik|A730004F22Rik|AI427843|AU015727|AU015859|Socs7 suppressor of cytokine signaling 4 protein-coding common_peak2_45_33_0.155390460545916_5.1651580715233_0.377553616161376-2 chr18 84588714 84589121 + 0.377553616161376 NA intron (NM_001033341, intron 1 of 8) CpG 587 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak1_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-2 chr10 60752151 60752736 + 0.377553616161376 NA intron (NM_023596, intron 1 of 5) intron (NM_023596, intron 1 of 5) 339 NM_023596 71279 Mm.284462 NM_023596 ENSMUSG00000020100 Slc29a3 4933435C21Rik|AW987637|Ent3 solute carrier family 29 (nucleoside transporters), member 3 protein-coding common_peak1_45_33_0.155390460545916_5.1651580715233_0.377553616161376-3 chr4 55651361 55652181 + 0.377553616161376 NA Intergenic C-rich|Low_complexity|Low_complexity -119296 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak2_45_33_0.155390460545916_5.1651580715233_0.377553616161376-3 chr7 135509674 135510299 + 0.377553616161376 NA Intergenic Intergenic 18668 NM_178669 212070 Mm.39721 NM_178669 ENSMUSG00000050866 Clrn3 AI649392|Tmem12 clarin 3 protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-3 chr10 86290457 86290935 + 0.377553616161376 NA TTS (NM_001164495) TTS (NM_001164495) -9716 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_45_33_0.155390460545916_5.1651580715233_0.377553616161376 chr14 120477872 120478173 + 0.377553616161376 NA promoter-TSS (NM_029519) promoter-TSS (NM_029519) -439 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-7 chr4 118290629 118291241 + 0.377553616161376 NA intron (NM_011213, intron 1 of 32) CpG 462 NM_011213 19268 Mm.29855 NM_011213 ENSMUSG00000033295 Ptprf AA591035|LAR|LARS|RPTP-LAR protein tyrosine phosphatase, receptor type, F protein-coding common_peak1_39_38_-0.242760255463819_5.16402209113034_0.377553616161376 chr10 19010065 19010827 + 0.377553616161376 NA intron (NM_001166402, intron 1 of 7) intron (NM_001166402, intron 1 of 7) 1517 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-8 chr4 129461695 129462262 + 0.377553616161376 NA exon (NM_133889, exon 2 of 11) exon (NM_133889, exon 2 of 11) 299 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding common_peak1_45_33_0.155390460545916_5.1651580715233_0.377553616161376-2 chr3 90603375 90604152 + 0.377553616161376 NA promoter-TSS (NM_011311) promoter-TSS (NM_011311) -7 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-4 chr12 116047810 116048295 + 0.377553616161376 NA intron (NM_019565, intron 1 of 2) intron (NM_019565, intron 1 of 2) 328 NM_019565 56220 Mm.254997 NM_019565 ENSMUSG00000042063 Zfp386 Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-6 chr16 58728037 58728661 + 0.377553616161376 NA intron (NR_045518, intron 1 of 3) CpG 439 NM_001252451 224250 Mm.29482 NM_171826 ENSMUSG00000022744 Cldnd1 1110019C08Rik|AA407103|AI849195|AW489850|Cldn25 claudin domain containing 1 protein-coding unique_peak1_39_38_-0.242760255463819_5.16402209113034_0.377553616161376 chr1 92379392 92379953 + 0.377553616161376 NA Intergenic Intergenic 84870 NR_105865 102465542 NR_105865 ENSMUSG00000098288 Mir6900 Gm27708|mmu-mir-6900 microRNA 6900 ncRNA common_peak1_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-3 chr7 120866218 120866717 + 0.377553616161376 NA intron (NM_001267710, intron 2 of 17) intron (NM_001267710, intron 2 of 17) 15278 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_45_33_0.155390460545916_5.1651580715233_0.377553616161376-4 chr5 64849487 64849970 + 0.377553616161376 NA Intergenic Intergenic 46205 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak1_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-2 chr17 6005671 6006285 + 0.377553616161376 NA intron (NM_001357667, intron 6 of 24) intron (NM_001357667, intron 6 of 24) -1602 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak1_45_33_0.155390460545916_5.1651580715233_0.377553616161376-5 chr7 144747299 144747834 + 0.377553616161376 NA Intergenic Intergenic -8974 NM_001242349 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding common_peak1_45_33_0.155390460545916_5.1651580715233_0.377553616161376 chr1 86528120 86528666 + 0.377553616161376 NA intron (NM_008972, intron 1 of 4) CpG-365 1836 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_39_38_-0.242760255463819_5.16402209113034_0.377553616161376-2 chr10 79684221 79684496 + 0.377553616161376 NA intron (NM_001359818, intron 1 of 4) intron (NM_001359818, intron 1 of 4) 2163 NM_001359817 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding common_peak1_105_95_-0.14624742502454_6.51183878820889_0.377414073485289-2 chr13 66932595 66933779 + 0.377414073485289 NA promoter-TSS (NM_025547) promoter-TSS (NM_025547) -115 NM_025547 66410 Mm.347939 NM_025547 ENSMUSG00000021519 Mterf3 2410017I18Rik|Mterfd1 mitochondrial transcription termination factor 3 protein-coding common_peak1_105_95_-0.14624742502454_6.51183878820889_0.377414073485289 chr10 42502113 42502825 + 0.377414073485289 NA exon (NM_017472, exon 1 of 4) exon (NM_017472, exon 1 of 4) 415 NM_017472 54198 Mm.277870 NM_017472 ENSMUSG00000019804 Snx3 SDP3 sorting nexin 3 protein-coding common_peak1_204_178_-0.100254290483184_7.43368863202266_0.377201792087372 chr9 6644949 6647288 + 0.377201792087372 NA Intergenic Intergenic -379571 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_135_120_-0.123142339084631_6.85729206773228_0.377191809992285 chr2 154791106 154792149 + 0.377191809992285 NA intron (NM_001139513, intron 1 of 8) CpG 517 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak2_168_148_-0.112242174916219_7.16304743300405_0.376971082480676 chr6 71543428 71544717 + 0.376971082480676 NA promoter-TSS (NM_001355675) promoter-TSS (NM_001355675) 220 NM_025783 66700 Mm.181278 NM_025783 ENSMUSG00000053119 Chmp3 25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24 charged multivesicular body protein 3 protein-coding common_peak1_260_200_0.0784775550800045_7.69029046871893_0.376936853264167 chr4 43399167 43401959 + 0.376936853264167 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -5939 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-5 chr18 52559383 52559831 + 0.376654945067947 NA Intergenic Intergenic -29740 NM_001286182 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-14 chr8 109142360 109142571 + 0.376654945067947 NA intron (NR_126329, intron 2 of 9) intron (NR_126329, intron 2 of 9) 67243 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-11 chr4 151996450 151996791 + 0.376654945067947 NA promoter-TSS (NM_172705) promoter-TSS (NM_172705) -441 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-2 chr13 45872449 45872832 + 0.376654945067947 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 92351 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-9 chr3 153913281 153913743 + 0.376654945067947 NA promoter-TSS (NM_001163478) promoter-TSS (NM_001163478) -546 NR_028094 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding unique_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-2 chr15 31185540 31186063 + 0.376654945067947 NA Intergenic Intergenic -38584 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-14 chr8 27059555 27059867 + 0.376654945067947 NA Intergenic Intergenic 17156 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-15 chr9 78113347 78113885 + 0.376654945067947 NA intron (NM_019987, intron 1 of 13) CpG 378 NM_019987 56542 Mm.288719 NM_019987 ENSMUSG00000009828 Ick 2210420N10Rik|AI848300|Mrk intestinal cell kinase protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-15 chr6 108117282 108117655 + 0.376654945067947 NA intron (NM_145937, intron 8 of 8) intron (NM_145937, intron 8 of 8) 52423 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-2 chr10 115362688 115363045 + 0.376654945067947 NA promoter-TSS (NM_001359470) promoter-TSS (NM_001359470) -365 NM_001359472 67226 Mm.29647 NM_133683 ENSMUSG00000069520 Tmem19 2810428F02Rik|AW125171 transmembrane protein 19 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-8 chr16 11063520 11063808 + 0.376654945067947 NA Intergenic Intergenic -2634 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding unique_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947 chr10 19570503 19570852 + 0.376654945067947 NA Intergenic Intergenic -21272 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947 chr3 51074269 51074664 + 0.376654945067947 NA Intergenic Intergenic -149981 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-14 chr5 118459470 118459743 + 0.376654945067947 NA Intergenic Intergenic -101113 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding unique_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-2 chr17 29489714 29490228 + 0.376654945067947 NA Intergenic Intergenic -1074 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-7 chr18 61951011 61951599 + 0.376654945067947 NA Intergenic Intergenic -1770 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-3 chr14 50870027 50870482 + 0.376654945067947 NA intron (NM_009351, intron 1 of 54) intron (NM_009351, intron 1 of 54) 300 NM_009351 21745 Mm.318736 NM_009351 ENSMUSG00000006281 Tep1 Tp1 telomerase associated protein 1 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-8 chr16 18878023 18878443 + 0.376654945067947 NA intron (NM_010435, intron 1 of 24) intron (NM_010435, intron 1 of 24) 1483 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-13 chr7 143008427 143008653 + 0.376654945067947 NA intron (NM_020286, intron 2 of 7) intron (NM_020286, intron 2 of 7) 2881 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947 chr1 33755952 33756247 + 0.376654945067947 NA intron (NM_145392, intron 1 of 2) intron (NM_145392, intron 1 of 2) 1651 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947 chr10 128981593 128981959 + 0.376654945067947 NA Intergenic Intergenic -8138 NM_146861 18373 Mm.377111 NM_146861 ENSMUSG00000069430 Olfr9 MOR269-3 olfactory receptor 9 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-3 chr10 85102280 85102488 + 0.376654945067947 NA promoter-TSS (NM_001013028) promoter-TSS (NM_001013028) 111 NM_010214 14202 Mm.46163 NM_010214 ENSMUSG00000050035 Fhl4 - four and a half LIM domains 4 protein-coding common_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947 chr3 36612965 36613317 + 0.376654945067947 NA intron (NM_027810, intron 1 of 18) CpG 248 NM_027810 71492 Mm.286187 NM_027810 ENSMUSG00000037325 Bbs7 8430406N16Rik Bardet-Biedl syndrome 7 (human) protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-2 chr11 97744911 97745174 + 0.376654945067947 NA promoter-TSS (NM_054051) promoter-TSS (NM_054051) 145 NR_106180 102466256 NR_106180 ENSMUSG00000098919 Mir8102 Gm27795|mmu-mir-8102 microRNA 8102 ncRNA common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-3 chr11 16830298 16830628 + 0.376654945067947 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 78260 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-7 chr4 137509308 137509889 + 0.376654945067947 NA intron (NM_008305, intron 6 of 96) MIR|SINE|MIR -28688 NR_105985 102465616 NR_105985 ENSMUSG00000099134 Mir7018 Gm27606|mmu-mir-7018 microRNA 7018 ncRNA unique_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-3 chr18 35661772 35662054 + 0.376654945067947 NA intron (NM_029485, intron 1 of 5) intron (NM_029485, intron 1 of 5) 273 NM_027733 71242 Mm.151498 NM_027733 ENSMUSG00000024352 Spata24 2700012K08Rik|4930583E11Rik|5133400G04Rik|AU016220|TIPT|TIPT2 spermatogenesis associated 24 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-6 chr12 95488090 95488471 + 0.376654945067947 NA Intergenic Intergenic -203946 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947 chr1 171038179 171038504 + 0.376654945067947 NA Intergenic CpG 19415 NM_144559 246256 Mm.251254 NM_144559 ENSMUSG00000059089 Fcgr4 4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3 Fc receptor, IgG, low affinity IV protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-12 chr7 112187936 112188497 + 0.376654945067947 NA Intergenic Intergenic -28734 NM_001360257 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-4 chr11 54214041 54214471 + 0.376654945067947 NA promoter-TSS (NR_045506) promoter-TSS (NR_045506) -968 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-13 chr8 3608623 3609021 + 0.376654945067947 NA exon (NM_001163749, exon 17 of 17) exon (NM_001163749, exon 17 of 17) 12474 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-8 chr19 28360457 28360880 + 0.376654945067947 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -317556 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-16 chr7 100706200 100706523 + 0.376654945067947 NA promoter-TSS (NM_001362169) promoter-TSS (NM_001362169) -274 NM_001362169 319604 Mm.260362 NM_178764 ENSMUSG00000029461 Fam168a 2610030B18Rik|B930006L02Rik|mKIAA0280 family with sequence similarity 168, member A protein-coding common_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-5 chr8 47933803 47934057 + 0.376654945067947 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 56621 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-15 chr9 110100694 110101034 + 0.376654945067947 NA exon (NM_001252683, exon 1 of 19) exon (NM_001252683, exon 1 of 19) 223 NM_001252683 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-10 chr2 84550161 84550447 + 0.376654945067947 NA Intergenic Intergenic -43431 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-6 chr12 112597088 112597410 + 0.376654945067947 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 8465 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-10 chr5 110135982 110136201 + 0.376654945067947 NA exon (NM_172717, exon 2 of 18) exon (NM_172717, exon 2 of 18) 261 NM_001289580 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-4 chr12 75528382 75528872 + 0.376654945067947 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 67573 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-11 chr3 57512681 57513227 + 0.376654945067947 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 62922 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-5 chr11 95099965 95100445 + 0.376654945067947 NA Intergenic Intergenic -19912 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-9 chr16 42876178 42876566 + 0.376654945067947 NA promoter-TSS (NR_040521) promoter-TSS (NR_040521) -610 NR_040522 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik Gm10809 RIKEN cDNA 4932412D23 gene ncRNA common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947 chr11 99466238 99466858 + 0.376654945067947 NA Intergenic Intergenic 26562 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding common_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-4 chr8 25088461 25088841 + 0.376654945067947 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 13160 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-6 chr17 31853339 31853799 + 0.376654945067947 NA intron (NM_010831, intron 3 of 13) intron (NM_010831, intron 3 of 13) 2235 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding unique_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947 chr1 186748950 186749248 + 0.376654945067947 NA intron (NM_026041, intron 1 of 4) intron (NM_026041, intron 1 of 4) 259 NM_026041 67223 Mm.289841 NM_026041 ENSMUSG00000001305 Rrp15 2810430M08Rik|5430437H21Rik ribosomal RNA processing 15 homolog (S. cerevisiae) protein-coding unique_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947 chr1 134909057 134909509 + 0.376654945067947 NA intron (NM_001081307, intron 1 of 23) intron (NM_001081307, intron 1 of 23) 46657 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-4 chr10 89527616 89528150 + 0.376654945067947 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 5739 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-15 chr8 121085645 121085984 + 0.376654945067947 NA intron (NM_010426, intron 1 of 1) intron (NM_010426, intron 1 of 1) 1428 NM_010426 15227 Mm.33897 NM_010426 ENSMUSG00000042812 Foxf1 AI450827|FREAC1|Foxf1a|Freac-1|HFH-8|Hfh8 forkhead box F1 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-3 chr11 97811480 97812026 + 0.376654945067947 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 12188 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding unique_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-2 chr4 56532323 56532855 + 0.376654945067947 NA Intergenic Intergenic 208836 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-6 chr3 19894877 19895330 + 0.376654945067947 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 232 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-3 chr11 78032432 78032953 + 0.376654945067947 NA promoter-TSS (NR_152257) promoter-TSS (NR_152257) -27 NR_152257 100504178 Mm.274329 NR_152257 ENSMUSG00000087050 Dhrs13os A030003K02Rik|AA682085 dehydrogenase/reductase (SDR family) member 13, opposite strand ncRNA common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-10 chr19 37907393 37907765 + 0.376654945067947 NA intron (NM_001302140, intron 49 of 53) intron (NM_001302140, intron 49 of 53) 135998 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-6 chr8 72134627 72135007 + 0.376654945067947 NA promoter-TSS (NM_001001491) promoter-TSS (NM_001001491) -475 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-7 chr15 98951906 98952446 + 0.376654945067947 NA intron (NM_011653, intron 1 of 3) intron (NM_011653, intron 1 of 3) 1325 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-12 chr5 34513617 34513983 + 0.376654945067947 NA exon (NM_139064, exon 1 of 6) exon (NM_139064, exon 1 of 6) 179 NM_139064 231130 Mm.28615 NM_139064 ENSMUSG00000059866 Tnip2 1810020H16Rik|ABIN-2|AI428870 TNFAIP3 interacting protein 2 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-2 chr10 24388968 24389229 + 0.376654945067947 NA Intergenic Intergenic 165581 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-4 chr8 34476089 34476501 + 0.376654945067947 NA Intergenic Intergenic 164021 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-4 chr12 71016159 71016626 + 0.376654945067947 NA promoter-TSS (NR_045055) promoter-TSS (NR_045055) 425 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-13 chr4 62360988 62361360 + 0.376654945067947 NA promoter-TSS (NM_001045528) promoter-TSS (NM_001045528) 473 NM_175090 20529 Mm.248637 NM_175090 ENSMUSG00000066150 Slc31a1 4930445G01Rik|AI787263|AU016967|Ctr1 solute carrier family 31, member 1 protein-coding unique_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-3 chr7 84332316 84332757 + 0.376654945067947 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 77502 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-4 chr9 9241579 9242106 + 0.376654945067947 NA intron (NR_045754, intron 2 of 3) intron (NR_045754, intron 2 of 3) -2829 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-12 chr5 138255787 138256239 + 0.376654945067947 NA intron (NM_001081108, intron 1 of 3) intron (NM_001081108, intron 1 of 3) 531 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-8 chr19 42268267 42268627 + 0.376654945067947 NA exon (NM_001141983, exon 7 of 7) exon (NM_001141983, exon 7 of 7) 11723 NR_037246 100526549 NR_037246 ENSMUSG00000093234 Mir3085 mir-3085|mmu-mir-3085 microRNA 3085 ncRNA common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-7 chr15 10770790 10771272 + 0.376654945067947 NA intron (NR_045063, intron 5 of 6) intron (NR_045063, intron 5 of 6) 56131 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-17 chr9 108578379 108578686 + 0.376654945067947 NA TTS (NM_028944) TTS (NM_028944) 138 NM_031392 83669 Mm.335454 NM_031392 ENSMUSG00000066357 Wdr6 mWDR6 WD repeat domain 6 protein-coding common_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-3 chr5 88565834 88566442 + 0.376654945067947 NA intron (NM_001289774, intron 1 of 17) intron (NM_001289774, intron 1 of 17) 1098 NM_001289775 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-13 chr5 135963069 135963369 + 0.376654945067947 NA exon (NM_001160366, exon 9 of 11) exon (NM_001160366, exon 9 of 11) 11257 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947 chr1 40171561 40172168 + 0.376654945067947 NA Intergenic Intergenic -53216 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-4 chr15 31245491 31245949 + 0.376654945067947 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 21335 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding unique_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947 chr5 38220145 38220423 + 0.376654945067947 NA promoter-TSS (NM_025281) promoter-TSS (NM_025281) 170 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-11 chr4 59387620 59387976 + 0.376654945067947 NA intron (NM_001163288, intron 6 of 16) intron (NM_001163288, intron 6 of 16) 50835 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-7 chr16 15887739 15888274 + 0.376654945067947 NA exon (NM_007679, exon 1 of 1) exon (NM_007679, exon 1 of 1) 720 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-11 chr7 39552486 39552708 + 0.376654945067947 NA Intergenic CpG 34831 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-10 chr4 141061021 141061489 + 0.376654945067947 NA promoter-TSS (NM_001145958) promoter-TSS (NM_001145958) -710 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-9 chr18 34519698 34520052 + 0.376654945067947 NA Intergenic Intergenic -13052 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-5 chr13 47277450 47277884 + 0.376654945067947 NA Intergenic Intergenic 83664 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding unique_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947 chr19 57242254 57242451 + 0.376654945067947 NA Intergenic Intergenic -26320 NM_178688 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-8 chr4 148448627 148448841 + 0.376654945067947 NA intron (NM_020009, intron 1 of 57) CpG 152 NM_020009 56717 Mm.21158 NM_020009 ENSMUSG00000028991 Mtor 2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat mechanistic target of rapamycin kinase protein-coding unique_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-3 chr19 57203712 57204169 + 0.376654945067947 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) -6309 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-9 chr2 173268720 173269165 + 0.376654945067947 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 7591 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-5 chr15 64325624 64326143 + 0.376654945067947 NA intron (NM_001276461, intron 2 of 28) intron (NM_001276461, intron 2 of 28) -13210 NM_001276463 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-6 chr15 100468632 100468934 + 0.376654945067947 NA promoter-TSS (NM_001357982) promoter-TSS (NM_001357982) -228 NM_001357983 68614 Mm.275272 NM_134093 ENSMUSG00000037353 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-9 chr7 112289726 112289952 + 0.376654945067947 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 64003 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_29_21_0.171100926561832_4.54498208191821_0.376654945067947-5 chr9 78531706 78532288 + 0.376654945067947 NA Intergenic Intergenic -50273 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-5 chr11 23497493 23497867 + 0.376654945067947 NA intron (NM_172391, intron 1 of 8) CpG 359 NM_001290655 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding common_peak1_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-2 chr4 105960793 105961113 + 0.376654945067947 NA Intergenic Intergenic -280260 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA unique_peak2_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-4 chr8 36666390 36666965 + 0.376654945067947 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -52734 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_24_25_-0.33108587641554_4.53489677993332_0.376654945067947-14 chr8 72421163 72421420 + 0.376654945067947 NA intron (NM_001122832, intron 1 of 15) CpG 183 NM_001122832 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-2 chr10 43750882 43751355 + 0.376654945067947 NA intron (NR_040581, intron 1 of 3) intron (NR_040581, intron 1 of 3) 4960 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_29_21_0.171100926561832_4.54498208191821_0.376654945067947-10 chr8 126421755 126422253 + 0.376654945067947 NA promoter-TSS (NM_174987) promoter-TSS (NM_174987) -497 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak1_25_25_-0.274901543685979_4.5629889462981_0.376654945067947-12 chr3 96226493 96226816 + 0.376654945067947 NA Intergenic Intergenic 5582 NM_178214 319190 Mm.439791 NM_178214 ENSMUSG00000068854 Hist2h2be AV127319|H2b-613|T25626 histone cluster 2, H2be protein-coding common_peak1_116_88_0.104420968370381_6.52794391515159_0.376583285095203 chr19 42518804 42519638 + 0.376583285095203 NA intron (NM_177464, intron 1 of 6) CpG 416 NM_177464 52013 Mm.254169 NM_177464 ENSMUSG00000025184 R3hcc1l 1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88 R3H domain and coiled-coil containing 1 like protein-coding common_peak1_117_88_0.116612674783037_6.53403976835792_0.376583285095203 chr8 27042367 27043441 + 0.376583285095203 NA intron (NM_001039077, intron 1 of 4) CpG 349 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak2_107_96_-0.134420970860213_6.53270235675702_0.376583285095203 chr18 42511558 42512476 + 0.376583285095203 NA intron (NM_001360881, intron 1 of 20) CpG 530 NR_110344 56070 Mm.270511 NM_001039474 ENSMUSG00000024498 Tcerg1 2410022J09Rik|2900090C16Rik|AI428505|CA150b|FBP23|FBP28|Taf2s|ca150|p144 transcription elongation regulator 1 (CA150) protein-coding common_peak2_147_112_0.0966718194957661_6.86851487216307_0.376537733660042 chr1 156558504 156559756 + 0.376537733660042 NA exon (NM_009595, exon 1 of 12) exon (NM_009595, exon 1 of 12) 343 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding common_peak1_136_121_-0.124521763447107_6.86847645583933_0.376537733660042 chr15 38710512 38711567 + 0.376537733660042 NA Intergenic Intergenic 17477 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak1_81_74_-0.157859122895442_6.14988912904816_0.376523540924376 chr19 22917652 22919136 + 0.376523540924376 NA intron (NM_001035239, intron 19 of 24) intron (NM_001035239, intron 19 of 24) 167789 NR_029591 387200 NR_029591 ENSMUSG00000065507 Mir204 Mirn204|mir-204|mmu-mir-204 microRNA 204 ncRNA common_peak2_89_67_0.116850326603_6.14588800455184_0.376523540924376 chr15 79435452 79436734 + 0.376523540924376 NA intron (NM_001359863, intron 2 of 10) intron (NM_001359863, intron 2 of 10) 5725 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_89_67_0.116850326603_6.14588800455184_0.376523540924376-2 chr18 77065143 77066067 + 0.376523540924376 NA promoter-TSS (NM_001164168) promoter-TSS (NM_001164168) -75 NM_001164168 17344 Mm.6370 NM_008602 ENSMUSG00000025423 Pias2 6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2 protein inhibitor of activated STAT 2 protein-coding common_peak2_81_74_-0.157859122895442_6.14988912904816_0.376523540924376-2 chr8 119686509 119687265 + 0.376523540924376 NA intron (NM_023395, intron 6 of 6) intron (NM_023395, intron 6 of 6) -13122 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_89_67_0.116850326603_6.14588800455184_0.376523540924376 chr5 35669385 35670436 + 0.376523540924376 NA intron (NM_001042615, intron 2 of 6) intron (NM_001042615, intron 2 of 6) 9870 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak2_81_74_-0.157859122895442_6.14988912904816_0.376523540924376-3 chr9 59036083 59037035 + 0.376523540924376 NA promoter-TSS (NM_001042752) promoter-TSS (NM_001042752) -118 NM_008684 18007 Mm.42249 NM_008684 ENSMUSG00000032340 Neo1 2610028H22Rik|AI327052|D930014N22Rik|Igdcc2 neogenin protein-coding common_peak2_81_74_-0.157859122895442_6.14988912904816_0.376523540924376 chr8 86624121 86624765 + 0.376523540924376 NA intron (NM_025827, intron 1 of 14) CpG 400 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak2_355_275_0.065672810475272_8.14136086201581_0.376500263508837 chr3 27708804 27711278 + 0.376500263508837 NA intron (NM_001356953, intron 1 of 26) CpG 411 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_66_49_0.137696827865663_5.71270460370756_0.376238101225474-3 chr2 155276518 155277098 + 0.376238101225474 NA intron (NR_046364, intron 1 of 2) CpG 444 NR_046364 66734 Mm.196239 NM_025735 ENSMUSG00000027602 Map1lc3a 1010001H21Rik|4922501H04Rik|LC3|LC3a microtubule-associated protein 1 light chain 3 alpha protein-coding common_peak2_66_49_0.137696827865663_5.71270460370756_0.376238101225474-2 chr2 73528941 73529836 + 0.376238101225474 NA promoter-TSS (NM_153138) promoter-TSS (NM_153138) 99 NM_153138 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding unique_peak2_66_49_0.137696827865663_5.71270460370756_0.376238101225474 chr19 7039269 7039909 + 0.376238101225474 NA intron (NM_016737, intron 1 of 13) CpG 437 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding common_peak1_66_49_0.137696827865663_5.71270460370756_0.376238101225474 chr14 13960484 13961158 + 0.376238101225474 NA intron (NM_001359900, intron 1 of 8) intron (NM_001359900, intron 1 of 8) 492 NM_001285780 66231 Mm.295875 NM_025435 ENSMUSG00000053453 Thoc7 Nif3l1bp1 THO complex 7 protein-coding common_peak1_66_49_0.137696827865663_5.71270460370756_0.376238101225474-4 chr7 38227232 38227826 + 0.376238101225474 NA intron (NM_024413, intron 1 of 1) intron (NM_024413, intron 1 of 1) 465 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_66_49_0.137696827865663_5.71270460370756_0.376238101225474 chr15 81263783 81264319 + 0.376238101225474 NA Intergenic MIRb|SINE|MIR -12189 NR_077230 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak1_66_49_0.137696827865663_5.71270460370756_0.376238101225474-2 chr15 53222767 53223254 + 0.376238101225474 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 123173 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_59_55_-0.183877356431719_5.71541624384174_0.376238101225462-2 chrX 73476898 73477494 + 0.376238101225462 NA Intergenic Intergenic -6405 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak2_59_55_-0.183877356431719_5.71541624384174_0.376238101225462 chr8 25785359 25785905 + 0.376238101225462 NA promoter-TSS (NM_026121) promoter-TSS (NM_026121) 41 NM_026032 67207 Mm.30198 NM_026032 ENSMUSG00000037296 Lsm1 2810025O06Rik|CASM LSM1 homolog, mRNA degradation associated protein-coding common_peak1_59_55_-0.183877356431719_5.71541624384174_0.376238101225462 chr16 21422842 21423684 + 0.376238101225462 NA intron (NM_001285894, intron 1 of 45) CpG 145 NM_001285894 209018 Mm.235683 NM_145948 ENSMUSG00000033653 Vps8 AI315068|AU040738|mKIAA0804 VPS8 CORVET complex subunit protein-coding common_peak1_59_55_-0.183877356431719_5.71541624384174_0.376238101225462-2 chr3 96196948 96197758 + 0.376238101225462 NA intron (NM_026975, intron 1 of 1) CpG 233 NM_026975 69168 Mm.104531 NM_026975 ENSMUSG00000015943 Bola1 1810037G04Rik bolA-like 1 (E. coli) protein-coding common_peak2_292_251_-0.0820769487825475_7.93624144910864_0.376085635090932 chr16 92693807 92696561 + 0.376085635090932 NA intron (NM_001111022, intron 3 of 6) intron (NM_001111022, intron 3 of 6) 2145 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_183_140_0.0891919902509724_7.18414734752428_0.375923200826777 chr11 100394528 100396478 + 0.375923200826777 NA intron (NM_010593, intron 1 of 13) intron (NM_010593, intron 1 of 13) 2287 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak2_171_150_-0.106272168262135_7.18526865519401_0.375923200826777 chr15 53617345 53619464 + 0.375923200826777 NA intron (NM_177225, intron 4 of 4) MIRb|SINE|MIR -4125 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_148_113_0.093607382360525_6.879693705345_0.375894798787257 chr8 120668253 120669426 + 0.375894798787257 NA promoter-TSS (NM_010926) promoter-TSS (NM_010926) 519 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit 4I1 protein-coding common_peak2_148_113_0.093607382360525_6.879693705345_0.375894798787257 chr14 31001064 31002051 + 0.375894798787257 NA 5' UTR (NM_029626, exon 1 of 10) 5' UTR (NM_029626, exon 1 of 10) 109 NM_026911 69019 Mm.28852 NM_026911 ENSMUSG00000021917 Spcs1 1810004F21Rik signal peptidase complex subunit 1 homolog (S. cerevisiae) protein-coding common_peak2_137_122_-0.125880580888775_6.87957421489485_0.375894798787257 chr2 72289748 72290738 + 0.375894798787257 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 4542 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_149_113_0.103189470641778_6.88448474948563_0.375894798787257 chr6 121109164 121110591 + 0.375894798787257 NA intron (NM_001270475, intron 1 of 31) CpG 21145 NM_001270475 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_137_122_-0.125880580888775_6.87957421489485_0.375894798787257 chr19 8820154 8821348 + 0.375894798787257 NA exon (NM_001081196, exon 1 of 14) exon (NM_001081196, exon 1 of 14) 1350 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak2_293_252_-0.0829097882472905_7.94153868057067_0.375779837855325 chr19 29521446 29523550 + 0.375779837855325 NA promoter-TSS (NR_015567) promoter-TSS (NR_015567) 216 NM_001081319 226089 Mm.353838 NM_177641 ENSMUSG00000038658 Ric1 C030046E11Rik|C130057E09Rik|Kiaa1432 RAB6A GEF complex partner 1 protein-coding common_peak1_118_89_0.112581831007663_6.54814401183351_0.375770379854992 chr3 7611935 7613691 + 0.375770379854992 NA promoter-TSS (NM_001313890) promoter-TSS (NM_001313890) 80 NM_001313890 16196 Mm.3825 NM_008371 ENSMUSG00000040329 Il7 A630026I06Rik|Il-7|hlb368 interleukin 7 protein-coding common_peak1_108_97_-0.136014958986762_6.54670236462183_0.375770379854992 chr15 38518571 38519166 + 0.375770379854992 NA intron (NM_001301688, intron 1 of 11) CpG 398 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding common_peak2_118_89_0.112581831007663_6.54814401183351_0.375770379854992 chr6 85960936 85961843 + 0.375770379854992 NA intron (NM_028099, intron 1 of 8) CpG 278 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding common_peak2_223_171_0.0842694003700943_7.46839945488714_0.375474953489808 chr3 142393396 142395657 + 0.375474953489808 NA intron (NM_001190854, intron 1 of 12) intron (NM_001190854, intron 1 of 12) 1170 NM_001190853 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_90_68_0.111617787677829_6.16433335061708_0.375466836511065 chr6 38875006 38875973 + 0.375466836511065 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 701 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak2_91_68_0.127273865444842_6.17216138950059_0.375466836511065 chr5 117318775 117319803 + 0.375466836511065 NA promoter-TSS (NM_001033311) promoter-TSS (NM_001033311) 23 NM_001033311 231668 Mm.298603 NM_001033311 ENSMUSG00000066894 Vsig10 - V-set and immunoglobulin domain containing 10 protein-coding common_peak1_91_68_0.127273865444842_6.17216138950059_0.375466836511065-2 chr9 96771620 96773059 + 0.375466836511065 NA intron (NR_102296, intron 4 of 4) intron (NR_102296, intron 4 of 4) 6777 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_82_75_-0.159603892552667_6.16812556716725_0.375466836511065-3 chr9 106170909 106171521 + 0.375466836511065 NA 5' UTR (NM_029896, exon 1 of 9) 5' UTR (NM_029896, exon 1 of 9) 286 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak2_90_68_0.111617787677829_6.16433335061708_0.375466836511065-3 chr5 115542692 115543573 + 0.375466836511065 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -16335 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_91_68_0.127273865444842_6.17216138950059_0.375466836511065 chr19 5117466 5118460 + 0.375466836511065 NA intron (NR_045528, intron 1 of 15) CpG 445 NR_045528 16594 Mm.271648 NM_008451 ENSMUSG00000024862 Klc2 8030455F02Rik|AW212649|KLC 2|KLC-2 kinesin light chain 2 protein-coding common_peak2_82_75_-0.159603892552667_6.16812556716725_0.375466836511065 chr9 99132258 99132975 + 0.375466836511065 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 7595 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak1_82_75_-0.159603892552667_6.16812556716725_0.375466836511065-2 chr2 58566014 58566930 + 0.375466836511065 NA promoter-TSS (NM_001289660) promoter-TSS (NM_001289660) 356 NM_001110205 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak2_90_68_0.111617787677829_6.16433335061708_0.375466836511065-2 chr2 163017033 163017973 + 0.375466836511065 NA 5' UTR (NM_172150, exon 1 of 13) 5' UTR (NM_172150, exon 1 of 13) 150 NM_001356522 245866 Mm.34034 NM_172150 ENSMUSG00000017858 Ift52 BC037708|NGD5 intraflagellar transport 52 protein-coding common_peak2_90_68_0.111617787677829_6.16433335061708_0.375466836511065 chr18 84677262 84677885 + 0.375466836511065 NA intron (NM_023149, intron 4 of 11) intron (NM_023149, intron 4 of 11) 4486 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_82_75_-0.159603892552667_6.16812556716725_0.375466836511065 chr11 83941294 83942659 + 0.375466836511065 NA promoter-TSS (NM_030096) promoter-TSS (NM_030096) -114 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-8 chr8 22411461 22411723 + 0.375453743811476 NA intron (NM_020560, intron 1 of 6) CpG 252 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-2 chr12 100159067 100159579 + 0.375453743811476 NA intron (NM_001290303, intron 1 of 13) intron (NM_001290303, intron 1 of 13) 330 NM_001290303 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-7 chr7 143783257 143783886 + 0.375453743811476 NA intron (NM_175534, intron 1 of 1) intron (NM_175534, intron 1 of 1) 929 NM_175534 244238 Mm.183561 NM_175534 ENSMUSG00000048965 Mrgpre C130069N09Rik|Ebrt3|Mgrf|MrgE MAS-related GPR, member E protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-5 chr4 45453577 45454217 + 0.375453743811476 NA intron (NM_001033306, intron 3 of 5) MIRb|SINE|MIR -45131 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-6 chr5 145167268 145167614 + 0.375453743811476 NA promoter-TSS (NM_133735) promoter-TSS (NM_133735) 228 NM_001291248 54188 Mm.196884 NM_178576 ENSMUSG00000029625 Cpsf4 30kDa|C79664 cleavage and polyadenylation specific factor 4 protein-coding common_peak1_46_34_0.144378286357088_5.20147216012351_0.375453743811476-3 chr4 137471574 137472238 + 0.375453743811476 NA intron (NM_008305, intron 1 of 96) B1_Mus2|SINE|Alu 3103 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476 chr1 163403769 163403970 + 0.375453743811476 NA promoter-TSS (NR_132627) promoter-TSS (NR_132627) -200 NM_178883 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-3 chr13 49213915 49214335 + 0.375453743811476 NA intron (NM_026738, intron 1 of 5) intron (NM_026738, intron 1 of 5) 1901 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak1_46_34_0.144378286357088_5.20147216012351_0.375453743811476-2 chr2 113440081 113440707 + 0.375453743811476 NA promoter-TSS (NM_001285459) promoter-TSS (NM_001285459) -670 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_46_34_0.144378286357088_5.20147216012351_0.375453743811476 chr1 43264234 43265004 + 0.375453743811476 NA Intergenic Intergenic -67858 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-4 chr2 146027046 146027748 + 0.375453743811476 NA Intergenic Intergenic 92613 NM_175280 78774 Mm.136347 NM_175280 ENSMUSG00000037143 Cfap61 4930529M08Rik|BB178539|BC024760 cilia and flagella associated protein 61 protein-coding common_peak2_46_34_0.144378286357088_5.20147216012351_0.375453743811476-9 chr9 106477353 106477941 + 0.375453743811476 NA promoter-TSS (NM_001311150) promoter-TSS (NM_001311150) 338 NM_145620 27966 Mm.239997 NM_145620 ENSMUSG00000041506 Rrp9 55kDa|D19435|D9Wsu10e|Rnu3ip2|U3-55k RRP9, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-7 chr7 30955823 30956457 + 0.37545374381147 NA intron (NM_011680, intron 3 of 9) CpG-12986 663 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding common_peak1_40_39_-0.243913547713681_5.19997132103052_0.37545374381147 chr12 112951732 112952462 + 0.37545374381147 NA Intergenic Intergenic -9955 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-4 chr19 42090547 42090933 + 0.37545374381147 NA exon (NM_145501, exon 1 of 9) exon (NM_145501, exon 1 of 9) 305 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-10 chr7 127207842 127208432 + 0.37545374381147 NA promoter-TSS (NM_001347655) promoter-TSS (NM_001347655) 331 NM_144522 68449 Mm.41420 NM_144522 ENSMUSG00000042492 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-9 chr7 120866160 120866629 + 0.37545374381147 NA intron (NM_001267710, intron 2 of 17) intron (NM_001267710, intron 2 of 17) 15205 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-6 chr6 48840434 48841034 + 0.37545374381147 NA promoter-TSS (NM_025326) promoter-TSS (NM_025326) 254 NM_023056 65963 Mm.28385 NM_023056 ENSMUSG00000029810 Tmem176b 1810009M01Rik|Clast1|Lr8 transmembrane protein 176B protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-3 chr16 46008776 46009461 + 0.37545374381147 NA intron (NM_001134480, intron 1 of 3) intron (NM_001134480, intron 1 of 3) 1295 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-8 chr7 80828406 80828975 + 0.37545374381147 NA Intergenic Intergenic -25359 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-11 chr8 71537637 71538127 + 0.37545374381147 NA promoter-TSS (NM_198095) promoter-TSS (NM_198095) -445 NM_198095 69550 Mm.260325 NM_198095 ENSMUSG00000046718 Bst2 2310015I10Rik|Bst-2|C87040|CD317|DAMP-1|GREG bone marrow stromal cell antigen 2 protein-coding common_peak1_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-2 chr5 86064716 86065475 + 0.37545374381147 NA intron (NM_001345903, intron 1 of 19) intron (NM_001345903, intron 1 of 19) 488 NM_001345902 12617 Mm.4649 NM_007683 ENSMUSG00000029253 Cenpc1 CENP-C|Cenpc centromere protein C1 protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-5 chr2 60746845 60747504 + 0.37545374381147 NA Intergenic Intergenic -24571 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147-2 chr12 52604640 52605133 + 0.37545374381147 NA Intergenic Intergenic -2564 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak2_40_39_-0.243913547713681_5.19997132103052_0.37545374381147 chr10 91240914 91241416 + 0.37545374381147 NA Intergenic Intergenic -20546 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_139_123_-0.116950276987559_6.8957211718931_0.37526272303666 chr15 38710459 38711429 + 0.37526272303666 NA Intergenic Intergenic 17572 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak1_150_114_0.100107853312664_6.89554397760071_0.37526272303666 chr1 89455569 89457123 + 0.37526272303666 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 1535 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_138_123_-0.127219259003788_6.89058668088498_0.37526272303666 chr8 35587878 35588638 + 0.37526272303666 NA 5' UTR (NM_001081279, exon 1 of 3) 5' UTR (NM_001081279, exon 1 of 3) 460 NM_001081279 52065 Mm.103246 NM_001081279 ENSMUSG00000070056 Mfhas1 2310066G09Rik|D8Ertd91e malignant fibrous histiocytoma amplified sequence 1 protein-coding common_peak1_138_123_-0.127219259003788_6.89058668088498_0.37526272303666 chr5 72914396 72915736 + 0.37526272303666 NA intron (NM_153567, intron 1 of 8) CpG 704 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak1_109_98_-0.137579298301915_6.56056697092865_0.374974786324343 chr15 76343228 76344414 + 0.374974786324343 NA intron (NM_025567, intron 1 of 6) CpG 298 NM_025567 66445 Mm.29196 NM_025567 ENSMUSG00000022551 Cyc1 2610002H19Rik|AA408921|Cyct1 cytochrome c-1 protein-coding common_peak2_119_90_0.108627945853945_6.56210861312567_0.374974786324343 chr15 88751648 88752580 + 0.374974786324343 NA intron (NM_181412, intron 1 of 2) CpG 403 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding common_peak2_119_90_0.108627945853945_6.56210861312567_0.374974786324343-2 chr18 75000539 75001310 + 0.374974786324343 NA promoter-TSS (NR_028552).2 promoter-TSS (NR_028552).2 -144 NR_028552 100217457 NR_028552 ENSMUSG00000064871 Snord58b MBII-199 small nucleolar RNA, C/D box 58B snoRNA common_peak2_109_98_-0.137579298301915_6.56056697092865_0.374974786324343 chr10 82860006 82861078 + 0.374974786324343 NA 5' UTR (NM_001042514, exon 1 of 14) 5' UTR (NM_001042514, exon 1 of 14) 201 NM_001042514 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak2_173_152_-0.108694198661174_7.20304074336206_0.374903849699649 chr9 64172532 64174235 + 0.374903849699649 NA promoter-TSS (NM_026507) promoter-TSS (NM_026507) -4 NM_024212 67891 Mm.280083 NM_024212 ENSMUSG00000032399 Rpl4 2010004J23Rik ribosomal protein L4 protein-coding common_peak2_186_142_0.0920398993640834_7.20589128646043_0.374903849699649 chr13 113616535 113618472 + 0.374903849699649 NA exon (NM_130796, exon 1 of 2) exon (NM_130796, exon 1 of 2) 1061 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_60_56_-0.185733944861865_5.74002304173381_0.374817547128552-2 chr11 12410214 12411089 + 0.374817547128552 NA intron (NM_001282993, intron 1 of 13) (TATATG)n|Simple_repeat|Simple_repeat 1489 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_60_56_-0.185733944861865_5.74002304173381_0.374817547128552-3 chr12 86859382 86860183 + 0.374817547128552 NA Intergenic Intergenic 25032 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_60_56_-0.185733944861865_5.74002304173381_0.374817547128552 chr4 133630876 133631837 + 0.374817547128552 NA intron (NM_001017968, intron 1 of 7) intron (NM_001017968, intron 1 of 7) 2073 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak2_60_56_-0.185733944861865_5.74002304173381_0.374817547128552-4 chr6 52159101 52159640 + 0.374817547128552 NA TTS (NR_146400) TTS (NR_146400) 846 NR_131181 105242658 Mm.372521 NR_131181 ENSMUSG00000087658 Hotairm1 Gm15051|Hoxaas1 Hoxa transcript antisense RNA, myeloid-specific 1 ncRNA common_peak2_60_56_-0.185733944861865_5.74002304173381_0.374817547128552 chr1 143702187 143702817 + 0.374817547128552 NA exon (NM_145991, exon 1 of 17) exon (NM_145991, exon 1 of 17) 391 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding common_peak2_60_56_-0.185733944861865_5.74002304173381_0.374817547128552-5 chr8 13531232 13532323 + 0.374817547128552 NA Intergenic Intergenic 30684 NM_025601 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_67_50_0.130350535791712_5.73760060986735_0.374817547128539-2 chr5 44226812 44227544 + 0.374817547128539 NA promoter-TSS (NM_173764) promoter-TSS (NM_173764) -572 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding common_peak1_67_50_0.130350535791712_5.73760060986735_0.374817547128539-3 chr5 139252464 139253326 + 0.374817547128539 NA promoter-TSS (NM_001163316) promoter-TSS (NM_001163316) 571 NM_026269 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding common_peak1_67_50_0.130350535791712_5.73760060986735_0.374817547128539-4 chr9 105395472 105396328 + 0.374817547128539 NA promoter-TSS (NM_172461) promoter-TSS (NM_172461) 538 NR_152139 66595 Mm.84941 NM_025651 ENSMUSG00000032567 Aste1 1100001A21Rik|AV006403 asteroid homolog 1 protein-coding common_peak2_67_50_0.130350535791712_5.73760060986735_0.374817547128539-2 chr19 10102121 10102946 + 0.374817547128539 NA Intergenic Intergenic -1030 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak2_67_50_0.130350535791712_5.73760060986735_0.374817547128539-3 chr9 100642592 100643227 + 0.374817547128539 NA promoter-TSS (NM_001357264) promoter-TSS (NM_001357264) -539 NM_009282 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding common_peak2_67_50_0.130350535791712_5.73760060986735_0.374817547128539 chr10 79916649 79917210 + 0.374817547128539 NA promoter-TSS (NM_177994) promoter-TSS (NM_177994) 1 NM_177994 109284 Mm.300416 NM_177994 ENSMUSG00000035781 R3hdm4 AI503502|C030046I01Rik R3H domain containing 4 protein-coding common_peak1_67_50_0.130350535791712_5.73760060986735_0.374817547128539 chr15 58033604 58034474 + 0.374817547128539 NA intron (NM_029418, intron 1 of 5) CpG 255 NM_029418 75758 Mm.455792 NM_029418 ENSMUSG00000101892 9130401M01Rik AI849328 RIKEN cDNA 9130401M01 gene protein-coding common_peak1_151_115_0.0970725002710866_6.90651724526312_0.374641233533041 chr13 30659525 30660979 + 0.374641233533041 NA intron (NM_134068, intron 1 of 7) intron (NM_134068, intron 1 of 7) 193 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding common_peak1_268_207_0.0723386048322583_7.73660902055722_0.374441590329558 chr9 57764084 57766099 + 0.374441590329558 NA exon (NM_007713, exon 1 of 13) exon (NM_007713, exon 1 of 13) 769 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak2_268_207_0.0723386048322583_7.73660902055722_0.374441590329558 chr8 26118429 26120243 + 0.374441590329558 NA promoter-TSS (NM_207659) promoter-TSS (NM_207659) -32 NM_001357292 77733 Mm.291906 NM_029965 ENSMUSG00000013878 Rnf170 6720407G21Rik|AI481227 ring finger protein 170 protein-coding common_peak2_92_69_0.12200212483527_6.1902840793626_0.374439317080688 chr13 45001386 45002042 + 0.374439317080688 NA intron (NM_025772, intron 1 of 9) CpG 382 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak1_92_69_0.12200212483527_6.1902840793626_0.374439317080688 chr1 34842110 34843010 + 0.374439317080688 NA intron (NM_001160236, intron 1 of 6) CpG 490 NM_174997 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b Mani|mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak1_92_69_0.12200212483527_6.1902840793626_0.374439317080688-3 chr2 90847236 90848174 + 0.374439317080688 NA intron (NM_001317242, intron 1 of 12) intron (NM_001317242, intron 1 of 12) 550 NM_001317242 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak1_92_69_0.12200212483527_6.1902840793626_0.374439317080688-2 chr18 84678284 84679588 + 0.374439317080688 NA intron (NM_023149, intron 3 of 11) intron (NM_023149, intron 3 of 11) 3123 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak2_83_76_-0.161306824248765_6.18613312857052_0.374439317080688 chr6 91210146 91210814 + 0.374439317080688 NA Intergenic Intergenic -2284 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_110_99_-0.139114826063071_6.57429877674319_0.374195957159847 chr3 34172264 34173022 + 0.374195957159847 NA Intergenic Intergenic -91289 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding common_peak2_110_99_-0.139114826063071_6.57429877674319_0.374195957159847-2 chr5 137080723 137081840 + 0.374195957159847 NA Intergenic (GGAGA)n|Simple_repeat|Simple_repeat -9009 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_120_91_0.104748804919311_6.57593635851667_0.374195957159823 chr11 119491365 119492026 + 0.374195957159823 NA promoter-TSS (NR_153849) promoter-TSS (NR_153849) 75 NM_177394 338371 Mm.271946 NM_177394 ENSMUSG00000039850 Endov A730011L01Rik endonuclease V protein-coding common_peak1_120_91_0.104748804919311_6.57593635851667_0.374195957159823 chr7 123123864 123124524 + 0.374195957159823 NA 5' UTR (NM_144925, exon 1 of 24) 5' UTR (NM_144925, exon 1 of 24) 309 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_520_439_-0.061632363992933_8.75054353152819_0.373921552872926 chr9 102717886 102721334 + 0.373921552872926 NA intron (NM_019764, intron 1 of 9) intron (NM_019764, intron 1 of 9) 1806 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-9 chr15 101388152 101388356 + 0.373562084705529 NA Intergenic Intergenic -18129 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-28 chrX 152368776 152369089 + 0.373562084705529 NA promoter-TSS (NR_045452) promoter-TSS (NR_045452) -96 NR_045452 75693 Mm.287381 NR_045451 ENSMUSG00000084885 3010001F23Rik - RIKEN cDNA 3010001F23 gene ncRNA unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-12 chr3 144686230 144686565 + 0.373562084705529 NA TTS (NM_019464) TTS (NM_019464) 33938 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-17 chr5 96163196 96163393 + 0.373562084705529 NA Intergenic Intergenic -1304 NM_144910 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-9 chr14 101830671 101831129 + 0.373562084705529 NA intron (NM_201529, intron 3 of 30) B1F|SINE|Alu -9723 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529 chr1 182504587 182504859 + 0.373562084705529 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 12887 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-8 chr17 33254667 33254932 + 0.373562084705529 NA intron (NM_029952, intron 1 of 3) intron (NM_029952, intron 1 of 3) 346 NM_029952 77652 Mm.460572 NM_029952 ENSMUSG00000094441 Zfp955a AI842447|Zfp883a zinc finger protein 955A protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-2 chr13 15536182 15536562 + 0.373562084705529 NA intron (NM_008130, intron 2 of 14) B1_Mus2|SINE|Alu 72649 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-8 chr19 29485165 29485421 + 0.373562084705529 NA Intergenic Intergenic 36694 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-18 chr7 73555036 73555530 + 0.373562084705529 NA non-coding (NR_037569, exon 3 of 5) non-coding (NR_037569, exon 3 of 5) 3112 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-3 chr11 68089653 68089894 + 0.373562084705529 NA intron (NM_018768, intron 6 of 7) intron (NM_018768, intron 6 of 7) 123315 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-6 chr11 76375838 76376223 + 0.373562084705529 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 23111 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-4 chr11 94346275 94346481 + 0.373562084705529 NA intron (NM_029600, intron 29 of 30) intron (NM_029600, intron 29 of 30) 18377 NM_146024 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-22 chr8 3647021 3647272 + 0.373562084705529 NA Intergenic Intergenic -8624 NM_001204959 57264 Mm.1181 NM_022984 ENSMUSG00000012705 Retn ADSF|Fizz3|Rstn|Xcp4 resistin protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-11 chr17 24721919 24722184 + 0.373562084705529 NA TTS (NM_008503) TTS (NM_008503) 1262 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-6 chr4 154248828 154249054 + 0.373562084705529 NA intron (NM_001162977, intron 5 of 36) intron (NM_001162977, intron 5 of 36) 50954 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-16 chr19 5433504 5433715 + 0.373562084705529 NA Intergenic Intergenic 8465 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-9 chr14 25462001 25462256 + 0.373562084705529 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 2943 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-14 chr7 80790375 80790632 + 0.373562084705529 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 12828 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-13 chr4 82304384 82304646 + 0.373562084705529 NA intron (NM_008687, intron 8 of 8) intron (NM_008687, intron 8 of 8) 201264 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-25 chrX 7260998 7261324 + 0.373562084705529 NA intron (NM_001243762, intron 2 of 13) intron (NM_001243762, intron 2 of 13) -12664 NR_030242 751544 NR_030242 ENSMUSG00000070139 Mir532 Mirn532|mir-532|mmu-mir-532 microRNA 532 ncRNA common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-18 chr5 124920569 124920833 + 0.373562084705529 NA Intergenic Intergenic 57996 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-21 chr6 48602200 48602424 + 0.373562084705529 NA Intergenic Intergenic 8429 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-8 chr5 105684532 105684869 + 0.373562084705529 NA Intergenic ID_B1|SINE|B4 -15269 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-10 chr8 120588689 120588895 + 0.373562084705529 NA exon (NM_178856, exon 2 of 5) exon (NM_178856, exon 2 of 5) 283 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-12 chr15 77821130 77821365 + 0.373562084705529 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 20928 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-11 chr8 90816785 90817032 + 0.373562084705529 NA Intergenic Intergenic -11927 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-19 chr17 56266656 56266957 + 0.373562084705529 NA Intergenic Intergenic 9961 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-3 chr11 76476607 76476843 + 0.373562084705529 NA intron (NM_001346670, intron 3 of 21) intron (NM_001346670, intron 3 of 21) -8260 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-7 chr15 62397526 62397907 + 0.373562084705529 NA Intergenic Intergenic -178265 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-4 chr12 69724980 69725213 + 0.373562084705529 NA promoter-TSS (NM_145443) promoter-TSS (NM_145443) 151 NM_001361690 68055 Mm.27844 NM_026536 ENSMUSG00000054894 Atp5s 1110015E18Rik|ATPW ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-17 chr7 130177598 130178021 + 0.373562084705529 NA exon (NM_001347638, exon 11 of 16) exon (NM_001347638, exon 11 of 16) 88999 NM_010207 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-23 chrX 10717834 10718096 + 0.373562084705529 NA intron (NM_026524, intron 1 of 1) CpG 600 NM_001166635 68041 Mm.29429 NM_026524 ENSMUSG00000008035 Mid1ip1 3110038L01Rik|Mig12|S14R Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-8 chr13 104179237 104179487 + 0.373562084705529 NA promoter-TSS (NM_001093760) promoter-TSS (NM_001093760) 264 NM_030731 81003 Mm.244190 NM_030731 ENSMUSG00000021712 Trim23 6330516O20Rik|AI450195|Arfd1 tripartite motif-containing 23 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-18 chr4 149425525 149425739 + 0.373562084705529 NA intron (NM_022022, intron 1 of 26) intron (NM_022022, intron 1 of 26) 999 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-5 chr13 74564158 74564558 + 0.373562084705529 NA Intergenic Intergenic -70408 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding unique_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-2 chr19 53450138 53450423 + 0.373562084705529 NA non-coding (NR_028427, exon 5 of 10) non-coding (NR_028427, exon 5 of 10) 14516 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-6 chr9 69432145 69432402 + 0.373562084705529 NA 3' UTR (NM_145618, exon 16 of 16) 3' UTR (NM_145618, exon 16 of 16) -21410 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-18 chr17 17619034 17619426 + 0.373562084705529 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 5259 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-6 chr15 53168169 53168448 + 0.373562084705529 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 177875 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-11 chr2 122348728 122348950 + 0.373562084705529 NA TTS (NM_001099297) TTS (NM_001099297) 20079 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-22 chrX 8239257 8239659 + 0.373562084705529 NA 3' UTR (NM_001290430, exon 13 of 13) 3' UTR (NM_001290430, exon 13 of 13) 12948 NM_133991 54632 Mm.327529 NM_133991 ENSMUSG00000031171 Ftsj1 AI931847|Ftsj|Ftsjl|Sfc12 FtsJ RNA methyltransferase homolog 1 (E. coli) protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529 chr1 160039683 160039882 + 0.373562084705529 NA Intergenic Intergenic -4598 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-13 chr2 173022501 173022736 + 0.373562084705529 NA intron (NM_019547, intron 1 of 3) intron (NM_019547, intron 1 of 3) 716 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-5 chr2 163803289 163803665 + 0.373562084705529 NA Intergenic Intergenic -17357 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-5 chr13 51101933 51102183 + 0.373562084705529 NA intron (NM_001283029, intron 1 of 5) intron (NM_001283029, intron 1 of 5) 511 NM_001283029 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-11 chr15 76701018 76701298 + 0.373562084705529 NA promoter-TSS (NM_027122) promoter-TSS (NM_027122) -384 NM_027122 69572 Mm.34920 NM_027122 ENSMUSG00000019080 Mfsd3 2310010G13Rik major facilitator superfamily domain containing 3 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-17 chr3 144098490 144098740 + 0.373562084705529 NA Intergenic Intergenic 103717 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-10 chr15 41715085 41715395 + 0.373562084705529 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -73755 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529 chr1 40129601 40129937 + 0.373562084705529 NA Intergenic Intergenic 43676 NM_001360800 16178 Mm.1349 NM_010555 ENSMUSG00000026073 Il1r2 CD121b|Il1r-2 interleukin 1 receptor, type II protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-16 chr9 54643657 54643947 + 0.373562084705529 NA intron (NM_053178, intron 1 of 13) intron (NM_053178, intron 1 of 13) 18083 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-24 chr9 54733438 54733642 + 0.373562084705529 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 1009 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-22 chr4 59455734 59455925 + 0.373562084705529 NA Intergenic Intergenic -17196 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-26 chrX 38456252 38456483 + 0.373562084705529 NA promoter-TSS (NM_010685) promoter-TSS (NM_010685) 93 NR_152733 16784 Mm.486 NM_010685 ENSMUSG00000016534 Lamp2 CD107b|LGP-B|Lamp II|Lamp-2|Lamp-2a|Lamp-2b|Lamp-2c|Mac3 lysosomal-associated membrane protein 2 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-8 chr13 95518795 95519049 + 0.373562084705529 NA intron (NM_007974, intron 1 of 1) intron (NM_007974, intron 1 of 1) 6318 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-18 chr8 121695809 121696013 + 0.373562084705529 NA Intergenic Intergenic -34648 NM_020605 57340 Mm.306870 NM_020605 ENSMUSG00000025318 Jph3 JP-3|Jp3 junctophilin 3 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-26 chr8 69936727 69936967 + 0.373562084705529 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) -34289 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-20 chr6 42359741 42359974 + 0.373562084705529 NA 3' UTR (NM_001289617, exon 11 of 11) 3' UTR (NM_001289617, exon 11 of 11) 10029 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-6 chr12 8876152 8876479 + 0.373562084705529 NA Intergenic Intergenic -44992 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-7 chr11 78984570 78984868 + 0.373562084705529 NA intron (NM_010708, intron 1 of 10) intron (NM_010708, intron 1 of 10) 205 NM_001159301 16859 Mm.341434 NM_010708 ENSMUSG00000001123 Lgals9 AA407335|AI194909|AI265545|LGALS35|Lgals5|gal-9|galectin-9 lectin, galactose binding, soluble 9 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-14 chr15 102019979 102020323 + 0.373562084705529 NA Intergenic Intergenic -8065 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-2 chr1 182371178 182371425 + 0.373562084705529 NA Intergenic Intergenic -29695 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529 chr1 183388466 183388696 + 0.373562084705529 NA promoter-TSS (NM_001277959) promoter-TSS (NM_001277959) -304 NM_021466 21339 Mm.383556 NM_021466 ENSMUSG00000072258 Taf1a TAFI48|mTAFI48 TATA-box binding protein associated factor, RNA polymerase I, A protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-10 chr3 88618897 88619277 + 0.373562084705529 NA intron (NM_001198911, intron 2 of 22) intron (NM_001198911, intron 2 of 22) -2019 NM_008487 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-12 chr2 152890002 152890417 + 0.373562084705529 NA intron (NM_001141975, intron 14 of 17) intron (NM_001141975, intron 14 of 17) -21143 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-19 chr5 105684614 105684875 + 0.373562084705529 NA Intergenic ID_B1|SINE|B4 -15225 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-12 chr2 38548162 38548394 + 0.373562084705529 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 36402 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-14 chr19 32187857 32188113 + 0.373562084705529 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 23028 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-9 chr17 56366633 56366932 + 0.373562084705529 NA intron (NM_172132, intron 5 of 22) intron (NM_172132, intron 5 of 22) 40732 NM_001357909 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b lysine (K)-specific demethylase 4B protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529 chr1 20653982 20654229 + 0.373562084705529 NA Intergenic Intergenic -15777 NR_131249 105661730 Mm.137893 NR_131249 ENSMUSG00000099906 Lincmd1 Linc-md1 long intergenic non-protein coding RNA of muscle differentiation 1 ncRNA unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-4 chr13 63246762 63247055 + 0.373562084705529 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 6879 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-4 chr10 96230335 96230578 + 0.373562084705529 NA intron (NR_110448, intron 1 of 2) intron (NR_110448, intron 1 of 2) 4249 NR_110448 74881 Mm.410819 NR_110448 ENSMUSG00000112762 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-2 chr18 74063804 74064036 + 0.373562084705529 NA intron (NM_172632, intron 1 of 5) CpG 1029 NM_172632 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-23 chr7 63925465 63925699 + 0.373562084705529 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 8725 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-6 chr13 15898057 15898302 + 0.373562084705529 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 90936 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-23 chr9 41937389 41937646 + 0.373562084705529 NA Intergenic Intergenic 139696 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-10 chr2 3238926 3239238 + 0.373562084705529 NA Intergenic Intergenic -45130 NM_008708 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-7 chr16 25067658 25067873 + 0.373562084705529 NA non-coding (NR_040374, exon 3 of 3) non-coding (NR_040374, exon 3 of 3) 8126 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-16 chr2 152793436 152793732 + 0.373562084705529 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 34905 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-5 chr14 7811521 7811918 + 0.373562084705529 NA Intergenic Intergenic -6238 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-24 chr5 146678307 146678682 + 0.373562084705529 NA Intergenic Intergenic -93255 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-16 chr7 55853149 55853365 + 0.373562084705529 NA intron (NM_011370, intron 1 of 30) intron (NM_011370, intron 1 of 30) 11186 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-3 chr11 75813659 75813971 + 0.373562084705529 NA intron (NR_136933, intron 1 of 3) intron (NR_136933, intron 1 of 3) -17755 NM_007873 13447 Mm.5137 NM_007873 ENSMUSG00000020848 Doc2b - double C2, beta protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-15 chr17 87613557 87613814 + 0.373562084705529 NA Intergenic Intergenic -22294 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-18 chr5 124578841 124579112 + 0.373562084705529 NA promoter-TSS (NM_181410) promoter-TSS (NM_181410) 155 NM_145371 209354 Mm.28839 NM_145371 ENSMUSG00000029388 Eif2b1 D5Ertd406e|EIF2BA eukaryotic translation initiation factor 2B, subunit 1 (alpha) protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-13 chr4 137287615 137287916 + 0.373562084705529 NA intron (NM_009523, intron 1 of 4) intron (NM_009523, intron 1 of 4) 10130 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-7 chr14 7826284 7826485 + 0.373562084705529 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 8427 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-21 chr3 94953730 94953931 + 0.373562084705529 NA promoter-TSS (NM_017395) promoter-TSS (NM_017395) -278 NM_017395 53970 Mm.24308 NM_017395 ENSMUSG00000005774 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-20 chr9 66989276 66989508 + 0.373562084705529 NA Intergenic Intergenic -13908 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-13 chr5 113736444 113736802 + 0.373562084705529 NA intron (NM_001010825, intron 1 of 2) intron (NM_001010825, intron 1 of 2) 841 NM_001010825 231630 Mm.21926 NM_001010825 ENSMUSG00000053334 Ficd D5Ertd40e|Hype FIC domain containing protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-5 chr11 103145444 103145659 + 0.373562084705529 NA Intergenic Intergenic 12192 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-7 chr5 66590597 66590798 + 0.373562084705529 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 28120 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-9 chr17 72967153 72967448 + 0.373562084705529 NA Intergenic (GAAAA)n|Simple_repeat|Simple_repeat 48995 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-10 chr5 144913866 144914251 + 0.373562084705529 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) -17242 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-2 chr10 17363684 17364073 + 0.373562084705529 NA Intergenic Intergenic -268096 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-20 chr2 102875762 102876120 + 0.373562084705529 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 25724 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-9 chr6 86405061 86405309 + 0.373562084705529 NA intron (NM_001164078, intron 1 of 11) intron (NM_001164078, intron 1 of 11) 966 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-19 chr6 52227516 52227718 + 0.373562084705529 NA promoter-TSS (NM_010456) promoter-TSS (NM_010456) -247 NM_001277238 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-2 chr1 133418507 133418891 + 0.373562084705529 NA intron (NM_011439, intron 1 of 13) intron (NM_011439, intron 1 of 13) 5513 NM_011439 20668 Mm.8575 NM_011439 ENSMUSG00000070643 Sox13 AA407916|AW259412|AW540933|Sox-13 SRY (sex determining region Y)-box 13 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-22 chr7 45619369 45619599 + 0.373562084705529 NA exon (NM_008051, exon 2 of 2) exon (NM_008051, exon 2 of 2) 1878 NM_008051 14343 Mm.56933 NM_008051 ENSMUSG00000008461 Fut1 - fucosyltransferase 1 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-15 chr2 113944301 113944696 + 0.373562084705529 NA Intergenic Intergenic -69067 NR_028423 320846 Mm.441458 NR_028423 ENSMUSG00000087694 A530058N18Rik - RIKEN cDNA A530058N18 gene ncRNA common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-12 chr16 43889307 43889561 + 0.373562084705529 NA promoter-TSS (NM_027801) promoter-TSS (NM_027801) 242 NM_029128 106248 Mm.275354 NM_029128 ENSMUSG00000022704 Qtrt2 3110012M05Rik|4930470H18Rik|AI648807|Qrtr2|Qtrtd1 queuine tRNA-ribosyltransferase accessory subunit 2 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-24 chrX 20364726 20365068 + 0.373562084705529 NA intron (NM_001290643, intron 1 of 5) intron (NM_001290643, intron 1 of 5) 416 NR_110967 19889 Mm.288141 NM_133669 ENSMUSG00000060090 Rp2 AI662636|Rp2h retinitis pigmentosa 2 homolog protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-2 chr10 111550068 111550312 + 0.373562084705529 NA Intergenic Intergenic 43904 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-7 chr17 27140627 27140932 + 0.373562084705529 NA Intergenic Intergenic -6888 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-4 chr10 111510968 111511263 + 0.373562084705529 NA Intergenic Intergenic 4829 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-3 chr11 88537073 88537297 + 0.373562084705529 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -82066 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-16 chr16 87712912 87713244 + 0.373562084705529 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 14124 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-23 chr4 138344749 138345053 + 0.373562084705529 NA intron (NM_028176, intron 2 of 3) intron (NM_028176, intron 2 of 3) -18605 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-4 chr13 34233774 34234040 + 0.373562084705529 NA intron (NM_001033167, intron 3 of 10) intron (NM_001033167, intron 3 of 10) 70943 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-25 chr8 11322428 11322710 + 0.373562084705529 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -9743 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-6 chr10 43489946 43490294 + 0.373562084705529 NA intron (NM_199028, intron 1 of 3) intron (NM_199028, intron 1 of 3) -2519 NM_001359601 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-14 chr5 125078724 125079043 + 0.373562084705529 NA intron (NM_011424, intron 14 of 46) intron (NM_011424, intron 14 of 46) 75408 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-8 chr17 44685501 44685737 + 0.373562084705529 NA intron (NM_001271627, intron 4 of 7) intron (NM_001271627, intron 4 of 7) 50557 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-6 chr6 58831585 58831799 + 0.373562084705529 NA 5' UTR (NM_001361967, exon 1 of 23) 5' UTR (NM_001361967, exon 1 of 23) 227 NM_001361966 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529 chr15 55121528 55121825 + 0.373562084705529 NA intron (NM_145470, intron 1 of 8) intron (NM_145470, intron 1 of 8) -8094 NR_045093 100503794 Mm.360519 NR_045093 ENSMUSG00000053749 Gm9920 - predicted gene 9920 ncRNA common_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-3 chr4 70410041 70410329 + 0.373562084705529 NA intron (NM_001313762, intron 1 of 33) CpG 250 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-19 chr8 121905878 121906102 + 0.373562084705529 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 1696 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-16 chr4 155130538 155130793 + 0.373562084705529 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 44061 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-15 chr7 109154751 109155028 + 0.373562084705529 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 15623 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529 chr10 24578034 24578379 + 0.373562084705529 NA Intergenic Intergenic -17236 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-5 chr10 111573615 111574010 + 0.373562084705529 NA Intergenic Intergenic 20461 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-8 chr12 102294306 102294583 + 0.373562084705529 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 10803 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-8 chr15 95366630 95366836 + 0.373562084705529 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 161281 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-27 chrX 73824651 73824904 + 0.373562084705529 NA 5' UTR (NM_001290540, exon 1 of 6) 5' UTR (NM_001290540, exon 1 of 6) 192 NM_001029868 245469 Mm.103782 NM_001029868 ENSMUSG00000002006 Pdzd4 B230341P03|D130075J17Rik|Kiaa1444-hp|LU1|PDZRN4L|Pdzk4|Pdzrnk4l|Xlu PDZ domain containing 4 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-9 chr18 52650674 52650862 + 0.373562084705529 NA intron (NM_030097, intron 1 of 3) intron (NM_030097, intron 1 of 3) 4548 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-15 chr6 31071204 31071497 + 0.373562084705529 NA Intergenic Intergenic -8257 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-13 chr19 5840666 5840923 + 0.373562084705529 NA non-coding (NR_131212, exon 1 of 1) non-coding (NR_131212, exon 1 of 1) 4684 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-19 chr5 130264199 130264419 + 0.373562084705529 NA intron (NR_153350, intron 3 of 15) intron (NR_153350, intron 3 of 15) 7272 NM_001015876 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-5 chr10 24595636 24595912 + 0.373562084705529 NA exon (NM_010217, exon 1 of 5) exon (NM_010217, exon 1 of 5) 332 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-4 chr13 49549356 49549639 + 0.373562084705529 NA intron (NM_001172481, intron 1 of 7) intron (NM_001172481, intron 1 of 7) 5054 NM_025711 66695 Mm.383216 NM_025711 ENSMUSG00000021388 Aspn 4631401G09Rik|AA986886|Plap1|Slrr1c asporin protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-19 chr9 45660999 45661305 + 0.373562084705529 NA exon (NM_001081270, exon 4 of 33) exon (NM_001081270, exon 4 of 33) 167486 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-13 chr17 26620623 26620986 + 0.373562084705529 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) -55592 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-11 chr16 34857908 34858127 + 0.373562084705529 NA intron (NM_139300, intron 2 of 31) intron (NM_139300, intron 2 of 31) 73067 NM_139300 107589 Mm.33360 NM_139300 ENSMUSG00000022836 Mylk 9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|nmMlck|smMLCK myosin, light polypeptide kinase protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-9 chr16 57166882 57167181 + 0.373562084705529 NA intron (NM_023175, intron 1 of 9) CpG 301 NM_023175 52633 Mm.383203 NM_023175 ENSMUSG00000022751 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-21 chr7 113213891 113214151 + 0.373562084705529 NA intron (NM_001357070, intron 1 of 19) intron (NM_001357070, intron 1 of 19) 6556 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-10 chr17 24649830 24650058 + 0.373562084705529 NA exon (NM_001357796, exon 1 of 6) exon (NM_001357796, exon 1 of 6) 361 NM_001357796 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-5 chr11 20898400 20898698 + 0.373562084705529 NA Intergenic Intergenic -67441 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-3 chr13 6226741 6227007 + 0.373562084705529 NA Intergenic Intergenic -321283 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-7 chr12 32819696 32819935 + 0.373562084705529 NA promoter-TSS (NM_021524) promoter-TSS (NM_021524) -520 NM_021524 59027 Mm.202727 NM_021524 ENSMUSG00000020572 Nampt 1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin nicotinamide phosphoribosyltransferase protein-coding unique_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529 chr11 101665540 101665771 + 0.373562084705529 NA intron (NM_025404, intron 1 of 1) CpG 114 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529 chr1 10954914 10955208 + 0.373562084705529 NA Intergenic Intergenic -38404 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-12 chr9 42098285 42098497 + 0.373562084705529 NA intron (NM_011436, intron 3 of 47) intron (NM_011436, intron 3 of 47) -21178 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-2 chr10 128323360 128323630 + 0.373562084705529 NA intron (NM_019953, intron 2 of 5) intron (NM_019953, intron 2 of 5) 1036 NM_019953 56530 Mm.44220 NM_019953 ENSMUSG00000025381 Cnpy2 5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9 canopy FGF signaling regulator 2 protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-5 chr17 87834962 87835173 + 0.373562084705529 NA Intergenic Intergenic -37073 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-17 chr3 128455912 128456192 + 0.373562084705529 NA Intergenic Intergenic -224447 NR_045704 402774 Mm.209170 NR_045704 ENSMUSG00000105816 D030025E07Rik - RIKEN cDNA D030025E07 gene ncRNA unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-15 chr16 31600916 31601244 + 0.373562084705529 NA Intergenic Intergenic -17053 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529 chr1 58797476 58797752 + 0.373562084705529 NA intron (NM_009812, intron 1 of 8) intron (NM_009812, intron 1 of 8) 2240 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-16 chr6 116693920 116694195 + 0.373562084705529 NA 3' UTR (NM_178768, exon 5 of 5) 3' UTR (NM_178768, exon 5 of 5) -20221 NM_178045 213391 Mm.257931 NM_178045 ENSMUSG00000042129 Rassf4 3830411C14Rik|AD037|AI586137 Ras association (RalGDS/AF-6) domain family member 4 protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-11 chr9 116368712 116368906 + 0.373562084705529 NA Intergenic Intergenic 179629 NR_152204 100043817 Mm.404276 NR_152204 Gm4668 - predicted gene 4668 ncRNA common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-5 chr12 81750485 81750738 + 0.373562084705529 NA intron (NM_001174107, intron 2 of 10) intron (NM_001174107, intron 2 of 10) 30559 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529 chr1 135812917 135813167 + 0.373562084705529 NA Intergenic Intergenic -5556 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-10 chr2 73608046 73608266 + 0.373562084705529 NA intron (NR_040623, intron 1 of 3) intron (NR_040623, intron 1 of 3) 11630 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-8 chr15 78451479 78451708 + 0.373562084705529 NA intron (NM_001355601, intron 10 of 17) intron (NM_001355601, intron 10 of 17) 17041 NM_001355601 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-11 chr2 91299535 91299796 + 0.373562084705529 NA intron (NM_175123, intron 4 of 8) intron (NM_175123, intron 4 of 8) 34550 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding unique_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-3 chr7 58800646 58800855 + 0.373562084705529 NA intron (NM_009728, intron 10 of 20) intron (NM_009728, intron 10 of 20) 142548 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-6 chr15 90608392 90608765 + 0.373562084705529 NA intron (NM_025815, intron 5 of 19) intron (NM_025815, intron 5 of 19) 70810 NM_025815 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-14 chr17 79741791 79742121 + 0.373562084705529 NA Intergenic Intergenic -26915 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-4 chr15 99875715 99875921 + 0.373562084705529 NA promoter-TSS (NM_001113545) promoter-TSS (NM_001113545) -362 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-5 chr8 35663865 35664098 + 0.373562084705529 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -74961 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-4 chr15 85424055 85424294 + 0.373562084705529 NA intron (NM_016843, intron 9 of 11) intron (NM_016843, intron 9 of 11) 79053 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-15 chr6 82030150 82030456 + 0.373562084705529 NA Intergenic Intergenic -11325 NM_145570 232146 Mm.489683 NM_145570 ENSMUSG00000035104 Eva1a BC014699|Fam176a|Tmem166 eva-1 homolog A (C. elegans) protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-20 chr6 143191785 143192041 + 0.373562084705529 NA intron (NM_029250, intron 4 of 7) intron (NM_029250, intron 4 of 7) 24683 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-21 chr9 69890281 69890518 + 0.373562084705529 NA Intergenic Intergenic -99067 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-15 chr4 133378054 133378256 + 0.373562084705529 NA intron (NM_016981, intron 1 of 11) intron (NM_016981, intron 1 of 11) 8379 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-4 chr1 149960229 149960751 + 0.373562084705529 NA intron (NM_008869, intron 1 of 17) intron (NM_008869, intron 1 of 17) 800 NM_008869 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-9 chr2 155894914 155895183 + 0.373562084705529 NA intron (NM_001355443, intron 6 of 9) intron (NM_001355443, intron 6 of 9) 35262 NM_001355443 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-14 chr5 33818664 33819015 + 0.373562084705529 NA Intergenic Intergenic -24273 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-12 chr5 103519874 103520182 + 0.373562084705529 NA intron (NM_011204, intron 9 of 47) intron (NM_011204, intron 9 of 47) 94836 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-17 chr16 91557658 91558048 + 0.373562084705529 NA intron (NM_008338, intron 2 of 6) intron (NM_008338, intron 2 of 6) 10759 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-7 chr8 73343446 73343737 + 0.373562084705529 NA intron (NM_001317391, intron 1 of 15) intron (NM_001317391, intron 1 of 15) 9949 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-2 chr12 13209443 13209643 + 0.373562084705529 NA Intergenic Intergenic 39631 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-6 chr13 70725792 70726174 + 0.373562084705529 NA Intergenic Intergenic -88349 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-2 chr1 128357122 128357410 + 0.373562084705529 NA intron (NM_008567, intron 1 of 16) intron (NM_008567, intron 1 of 16) 2439 NM_001313695 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-25 chrX 52912411 52912642 + 0.373562084705529 NA intron (NM_001290546, intron 1 of 8) CpG 312 NM_001290546 70998 Mm.26870 NM_027642 ENSMUSG00000025626 Phf6 2700007B13Rik|4931428F02Rik|mKIAA1823 PHD finger protein 6 protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-11 chr15 101371079 101371282 + 0.373562084705529 NA Intergenic Intergenic -1055 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding unique_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-11 chr3 128565768 128566114 + 0.373562084705529 NA Intergenic Intergenic -334336 NR_045704 402774 Mm.209170 NR_045704 ENSMUSG00000105816 D030025E07Rik - RIKEN cDNA D030025E07 gene ncRNA unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-10 chr15 25576383 25576821 + 0.373562084705529 NA Intergenic Intergenic -45948 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-14 chr4 11736376 11736606 + 0.373562084705529 NA Intergenic Intergenic -21666 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-7 chr14 63178219 63178453 + 0.373562084705529 NA promoter-TSS (NM_001360211) promoter-TSS (NM_001360211) -449 NM_001360211 14137 Mm.474432 NM_010191 ENSMUSG00000021273 Fdft1 SQS|SS farnesyl diphosphate farnesyl transferase 1 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-13 chr15 89475843 89476161 + 0.373562084705529 NA promoter-TSS (NR_077233) promoter-TSS (NR_077233) -250 NR_077233 100532730 Mm.461541 NR_077233 C230037L18Rik - RIKEN cDNA C230037L18 gene ncRNA common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-7 chr10 71130663 71130862 + 0.373562084705529 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 28928 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-3 chr13 15808706 15809057 + 0.373562084705529 NA intron (NR_046131, intron 1 of 4) intron (NR_046131, intron 1 of 4) 1638 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-25 chr7 80715064 80715312 + 0.373562084705529 NA intron (NM_016721, intron 37 of 37) intron (NM_016721, intron 37 of 37) -26311 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-17 chr7 49210023 49210303 + 0.373562084705529 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -36026 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-10 chr15 103495804 103496064 + 0.373562084705529 NA intron (NM_153505, intron 30 of 30) intron (NM_153505, intron 30 of 30) -7100 NM_008800 18574 Mm.390792 NM_008800 ENSMUSG00000022489 Pde1b Pde1b1 phosphodiesterase 1B, Ca2+-calmodulin dependent protein-coding common_peak2_13_15_-0.461245926634831_3.76937703668258_0.373562084705529-3 chr1 135846271 135846471 + 0.373562084705529 NA intron (NM_001130175, intron 5 of 13) intron (NM_001130175, intron 5 of 13) 5510 NM_001130176 21956 Mm.247470 NM_011619 ENSMUSG00000026414 Tnnt2 Tnt|cTnT troponin T2, cardiac protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-3 chr10 7156870 7157145 + 0.373562084705529 NA intron (NM_172546, intron 2 of 12) intron (NM_172546, intron 2 of 12) 55230 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-12 chr18 14990733 14990978 + 0.373562084705529 NA intron (NR_045372, intron 3 of 4) intron (NR_045372, intron 3 of 4) 1860 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-2 chr11 16832039 16832363 + 0.373562084705529 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 79998 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-3 chr13 15551173 15551417 + 0.373562084705529 NA intron (NM_008130, intron 3 of 14) intron (NM_008130, intron 3 of 14) 87572 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-4 chr5 5418992 5419269 + 0.373562084705529 NA Intergenic Intergenic -38879 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding unique_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-3 chr1 150042199 150042413 + 0.373562084705529 NA Intergenic Intergenic 57568 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA common_peak1_17_12_0.198326510104857_3.79960297319352_0.373562084705529-24 chr7 89769857 89770216 + 0.373562084705529 NA intron (NM_181407, intron 3 of 13) intron (NM_181407, intron 3 of 13) 133593 NM_001162979 70884 Mm.252823 NM_001162979 ENSMUSG00000039391 Ccdc81 4921513D09Rik coiled-coil domain containing 81 protein-coding common_peak2_17_12_0.198326510104857_3.79960297319352_0.373562084705529-2 chr10 67747677 67747915 + 0.373562084705529 NA Intergenic Intergenic 164866 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding unique_peak2_14_15_-0.362412475227627_3.81879376238619_0.373562084705529-6 chr13 23751159 23751363 + 0.373562084705529 NA exon (NM_175660, exon 1 of 1) exon (NM_175660, exon 1 of 1) 173 NM_175660 319172 Mm.423402 NM_175660 ENSMUSG00000061615 Hist1h2ab H2A.1|H2a-53 histone cluster 1, H2ab protein-coding common_peak1_13_15_-0.461245926634831_3.76937703668258_0.373562084705529 chr10 84390933 84391134 + 0.373562084705529 NA intron (NM_001004363, intron 4 of 6) intron (NM_001004363, intron 4 of 6) 49438 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-2 chr13 21811919 21812215 + 0.373496418836697 NA TTS (NM_175657) TTS (NM_175657) 283 NM_175657 319161 Mm.261664 NM_175657 ENSMUSG00000069305 Hist1h4n - histone cluster 1, H4n protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-3 chr13 113270304 113270767 + 0.373496418836697 NA Intergenic Intergenic 60876 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-5 chr16 21338403 21338770 + 0.373496418836697 NA Intergenic Intergenic -5230 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-9 chr3 69317085 69317468 + 0.373496418836697 NA 5' UTR (NM_178726, exon 1 of 4) 5' UTR (NM_178726, exon 1 of 4) 358 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-7 chr3 60504249 60504663 + 0.373496418836697 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 3277 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-7 chr5 125433649 125433978 + 0.373496418836697 NA intron (NM_203319, intron 1 of 26) intron (NM_203319, intron 1 of 26) 235 NM_203319 208144 Mm.296385 NM_203319 ENSMUSG00000029480 Dhx37 Gm1050|Gm451|mKIAA1517 DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-3 chr13 31165948 31166280 + 0.373496418836697 NA Intergenic Intergenic 74972 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-6 chr15 81859623 81859922 + 0.373496418836697 NA Intergenic CpG -1446 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-10 chr4 103214435 103214731 + 0.373496418836697 NA intron (NM_177732, intron 1 of 9) CpG 593 NM_001356276 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-7 chr4 45138060 45138617 + 0.373496418836697 NA Intergenic Intergenic -30225 NM_001099675 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 protein-coding unique_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-2 chr8 13288273 13288563 + 0.373496418836697 NA promoter-TSS (NM_001042650) promoter-TSS (NM_001042650) -292 NM_001042650 102323 Mm.368890 NM_001024504 ENSMUSG00000038506 Dcun1d2 AW495713|mFLJ10704 DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-8 chr3 94310379 94310831 + 0.373496418836697 NA intron (NM_029431, intron 1 of 5) intron (NM_029431, intron 1 of 5) 473 NM_029431 75778 Mm.45092 NM_029431 ENSMUSG00000028145 Them4 2700077M13Rik|4921507I02Rik thioesterase superfamily member 4 protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697 chr12 84284837 84285171 + 0.373496418836697 NA promoter-TSS (NM_029880) promoter-TSS (NM_029880) -292 NM_029880 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-4 chr15 27321991 27322284 + 0.373496418836697 NA Intergenic Intergenic -144540 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-2 chr12 17266638 17266967 + 0.373496418836697 NA intron (NM_027959, intron 1 of 12) CpG 207 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-4 chr19 16016573 16016940 + 0.373496418836697 NA Intergenic Intergenic 31681 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-9 chr7 138845504 138846096 + 0.373496418836697 NA promoter-TSS (NM_026391) promoter-TSS (NM_026391) 467 NM_001045483 69546 Mm.31598 NM_027115 ENSMUSG00000041775 Mapk1ip1 2310009E07Rik|AU043776|MISS mitogen-activated protein kinase 1 interacting protein 1 protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-2 chr11 80491049 80491568 + 0.373496418836697 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 14285 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-11 chr7 49093364 49093578 + 0.373496418836697 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 68687 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA unique_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-3 chr8 124201741 124202252 + 0.373496418836697 NA Intergenic Intergenic -29398 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697 chr19 57274868 57275550 + 0.373496418836697 NA intron (NR_045319, intron 1 of 2) intron (NR_045319, intron 1 of 2) 1249 NR_045319 78120 Mm.445892 NR_045319 4930449E18Rik - RIKEN cDNA 4930449E18 gene ncRNA common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-5 chr2 51972134 51972750 + 0.373496418836697 NA intron (NM_019401, intron 1 of 7) intron (NM_019401, intron 1 of 7) 766 NM_001141949 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-8 chr5 66549905 66550434 + 0.373496418836697 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 68648 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-9 chr8 64543729 64544024 + 0.373496418836697 NA Intergenic Intergenic -29435 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-9 chr4 45467524 45468013 + 0.373496418836697 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) -59002 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697 chr7 80269754 80270252 + 0.373496418836697 NA exon (NM_178070, exon 1 of 23) exon (NM_178070, exon 1 of 23) 348 NM_178070 233405 Mm.322870 NM_178070 ENSMUSG00000030534 Vps33b - vacuolar protein sorting 33B protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-3 chr11 116620608 116621160 + 0.373496418836697 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 3368 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-10 chr7 98816455 98816988 + 0.373496418836697 NA Intergenic Intergenic -18391 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-5 chr2 84648172 84648822 + 0.373496418836697 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 983 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-12 chr6 6956101 6956491 + 0.373496418836697 NA intron (NM_001077713, intron 1 of 1) intron (NM_001077713, intron 1 of 1) 278 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-8 chr4 62705274 62705854 + 0.373496418836697 NA Intergenic MIR|SINE|MIR 31590 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-3 chr15 102571765 102572136 + 0.373496418836697 NA intron (NM_001310066, intron 2 of 11) intron (NM_001310066, intron 2 of 11) -31058 NR_155446 105246046 NR_155446 LOC105246046 - uncharacterized LOC105246046 ncRNA common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-8 chr6 145968013 145968281 + 0.373496418836697 NA Intergenic Intergenic 34025 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697 chr8 71396891 71397182 + 0.373496418836697 NA intron (NM_026636, intron 1 of 8) CpG 181 NM_026636 68251 Mm.21749 NM_026636 ENSMUSG00000031820 Babam1 5430437P03Rik|Merit40 BRISC and BRCA1 A complex member 1 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-5 chr2 119112502 119112792 + 0.373496418836697 NA promoter-TSS (NM_011234) promoter-TSS (NM_011234) -170 NM_011234 19361 Mm.330492 NM_011234 ENSMUSG00000027323 Rad51 AV304093|Rad51a|Reca RAD51 recombinase protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-10 chr6 142344588 142345077 + 0.373496418836697 NA promoter-TSS (NM_183165) promoter-TSS (NM_183165) -865 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-10 chr9 119340793 119341340 + 0.373496418836697 NA promoter-TSS (NM_130864) promoter-TSS (NM_130864) -228 NM_130864 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-8 chr5 124531168 124531466 + 0.373496418836697 NA promoter-TSS (NM_021430) promoter-TSS (NM_021430) 74 NM_021430 75695 Mm.41180 NM_021430 ENSMUSG00000029392 Rilpl1 2900002H16Rik|6330559I19Rik|GOSPEL Rab interacting lysosomal protein-like 1 protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-12 chr8 34277209 34277574 + 0.373496418836697 NA Intergenic Intergenic -110679 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-2 chr13 67552644 67553059 + 0.373496418836697 NA promoter-TSS (NR_131100) promoter-TSS (NR_131100) 301 NM_001035231 212276 Mm.422831 NM_183145 ENSMUSG00000095432 Zfp748 KRAB-O|Rslcan20/21|Zfp208|mszf54 zinc finger protein 748 protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-13 chr8 61757342 61757731 + 0.373496418836697 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 2562 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-4 chr15 64060160 64060441 + 0.373496418836697 NA promoter-TSS (NM_001360038) promoter-TSS (NM_001360038) 148 NM_001360036 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-6 chr18 35815899 35816177 + 0.373496418836697 NA Intergenic Intergenic -13750 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-8 chr19 32293800 32294122 + 0.373496418836697 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 55355 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-6 chr5 31567448 31567848 + 0.373496418836697 NA Intergenic Intergenic 3749 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-13 chr7 84077612 84077914 + 0.373496418836697 NA intron (NM_030728, intron 1 of 28) intron (NM_030728, intron 1 of 28) 8742 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-5 chr15 80916625 80916859 + 0.373496418836697 NA exon (NM_144812, exon 19 of 25) exon (NM_144812, exon 19 of 25) -23297 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-9 chr6 57691707 57692080 + 0.373496418836697 NA exon (NM_025574, exon 1 of 2) exon (NM_025574, exon 1 of 2) 185 NM_025574 66459 Mm.44201 NM_025574 ENSMUSG00000043162 Pyurf 2610022G08Rik|AI847956|Prey Pigy upstream reading frame protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-6 chr19 36208383 36208665 + 0.373496418836697 NA Intergenic Intergenic -88680 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-11 chr5 115489246 115489450 + 0.373496418836697 NA Intergenic Intergenic -4864 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding unique_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-4 chr11 105126568 105126934 + 0.373496418836697 NA intron (NM_172567, intron 1 of 8) CpG 326 NM_172567 52686 Mm.270091 NM_172567 ENSMUSG00000020691 Mettl2 2810438F06Rik|AW493404|C130031G21Rik|D11Ertd768e|METL|PSENIP1 methyltransferase like 2 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-7 chr2 168532622 168532957 + 0.373496418836697 NA intron (NM_001037177, intron 5 of 6) intron (NM_001037177, intron 5 of 6) 57576 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-3 chr15 39042168 39042597 + 0.373496418836697 NA Intergenic Intergenic -34550 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-3 chr12 103434287 103434644 + 0.373496418836697 NA intron (NM_194069, intron 1 of 3) intron (NM_194069, intron 1 of 3) 276 NM_194069 52668 Mm.2121 NM_026790 ENSMUSG00000064215 Ifi27 1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1 interferon, alpha-inducible protein 27 protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-12 chr7 25267630 25267871 + 0.373496418836697 NA promoter-TSS (NM_001302811) promoter-TSS (NM_001302811) 51 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-15 chr8 11386938 11387205 + 0.373496418836697 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -74245 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697 chr1 24005261 24005666 + 0.373496418836697 NA intron (NM_026503, intron 1 of 2) CpG 177 NM_026503 68002 Mm.250424 NM_026503 ENSMUSG00000026154 Sdhaf4 1110058L19Rik|1700001E18Rik|C6orf57 succinate dehydrogenase complex assembly factor 4 protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-6 chr2 167539786 167540298 + 0.373496418836697 NA intron (NM_011427, intron 2 of 2) intron (NM_011427, intron 2 of 2) 1847 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-4 chr16 11908497 11908968 + 0.373496418836697 NA intron (NR_033509, intron 2 of 2) intron (NR_033509, intron 2 of 2) 691 NM_146067 223978 Mm.86360 NM_146067 ENSMUSG00000065979 Cpped1 C530044N13Rik calcineurin-like phosphoesterase domain containing 1 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-4 chr15 53342350 53342620 + 0.373496418836697 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 3698 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697 chr1 179573991 179574610 + 0.373496418836697 NA intron (NM_146105, intron 1 of 10) intron (NM_146105, intron 1 of 10) 27771 NM_146105 226744 Mm.87662 NM_146105 ENSMUSG00000038949 Cnst 9630058J23Rik consortin, connexin sorting protein protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-7 chr19 46216074 46216407 + 0.373496418836697 NA intron (NM_178930, intron 3 of 39) intron (NM_178930, intron 3 of 39) 63682 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-11 chr6 142360006 142360808 + 0.373496418836697 NA TTS (NM_023042) TTS (NM_023042) 14710 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding unique_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-5 chr3 144665228 144665574 + 0.373496418836697 NA Intergenic Intergenic 54934 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-7 chr18 65800157 65800431 + 0.373496418836697 NA promoter-TSS (NM_025468) promoter-TSS (NM_025468) -284 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding unique_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-2 chr7 84549627 84550098 + 0.373496418836697 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 20908 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-14 chr8 11374624 11375031 + 0.373496418836697 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -62001 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-2 chr10 68157248 68157916 + 0.373496418836697 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 121144 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697 chr10 60572941 60573340 + 0.373496418836697 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 123350 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697-5 chr16 93911783 93912129 + 0.373496418836697 NA Intergenic PB1D7|SINE|Alu 17611 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding common_peak2_30_22_0.153942563069013_4.60053323759152_0.373496418836697 chr11 97434614 97435004 + 0.373496418836697 NA Intergenic Intergenic -15351 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-9 chr5 115489229 115489465 + 0.373496418836697 NA Intergenic Intergenic -4863 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697 chr10 79704476 79704874 + 0.373496418836697 NA intron (NM_001077184, intron 1 of 6) intron (NM_001077184, intron 1 of 6) 317 NM_009768 12215 Mm.726 NM_009768 ENSMUSG00000023175 Bsg AI115436|AI325119|CD147|EMMPRIN|HT-7 basigin protein-coding common_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-4 chr17 73574774 73575199 + 0.373496418836697 NA intron (NM_027864, intron 1 of 14) MamTip2|DNA|hAT-Tip100 135465 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding unique_peak1_31_22_0.199423108587538_4.62327351035078_0.373496418836697-3 chr10 127120599 127121079 + 0.373496418836697 NA intron (NM_177614, intron 1 of 13) intron (NM_177614, intron 1 of 13) 321 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak2_26_26_-0.275285671690066_4.61724466631844_0.373496418836697 chr1 52499993 52500252 + 0.373496418836697 NA intron (NM_008667, intron 1 of 7) CpG 326 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_26_26_-0.275285671690066_4.61724466631844_0.373496418836697-2 chr12 80367927 80368221 + 0.373496418836697 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 23603 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak2_31_22_0.199423108587538_4.62327351035078_0.373496418836697-2 chr14 55094874 55095151 + 0.373496418836697 NA 5' UTR (NM_153083, exon 1 of 2) 5' UTR (NM_153083, exon 1 of 2) 228 NM_153083 105663 Mm.319204 NM_153083 ENSMUSG00000045691 Thtpa AW122966 thiamine triphosphatase protein-coding common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-10 chr6 108704712 108705111 + 0.373496418836697 NA Intergenic Intergenic -43977 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_30_22_0.153942563069013_4.60053323759152_0.373496418836697-6 chr2 165666644 165667207 + 0.373496418836697 NA intron (NM_001271962, intron 2 of 15) intron (NM_001271962, intron 2 of 15) 11627 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-8 chr6 86371438 86371859 + 0.373466121463214 NA intron (NM_026506, intron 1 of 3) CpG 108 NM_026506 68011 Mm.276802 NM_026506 ENSMUSG00000057278 Snrpg 2810024K17Rik|AL022803|SMG|sm-G|snRNP-G small nuclear ribonucleoprotein polypeptide G protein-coding common_peak1_41_40_-0.245017308598704_5.23504335031873_0.373466121463214 chr7 66079739 66080121 + 0.373466121463214 NA intron (NM_001348246, intron 1 of 5) CpG 281 NM_024439 109815 Mm.482127 NM_024439 ENSMUSG00000075701 Selenos 1500011E07Rik|C78786|H-4|H-47|H4|H47|Sels|Vimp selenoprotein S protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-5 chr19 6980635 6981049 + 0.373466121463214 NA promoter-TSS (NM_001360286) promoter-TSS (NM_001360286) -378 NM_001166368 14227 Mm.4234 NM_008020 ENSMUSG00000056629 Fkbp2 mFKBP13|mFKBP2 FK506 binding protein 2 protein-coding common_peak2_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-2 chr13 70731760 70732195 + 0.373466121463214 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -94343 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_41_40_-0.245017308598704_5.23504335031873_0.373466121463214 chr3 53463791 53464144 + 0.373466121463214 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) 150 NM_173382 212127 Mm.491292 NM_173382 ENSMUSG00000049504 Proser1 2810046L04Rik|9330161F11 proline and serine rich 1 protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-6 chr4 48042960 48043833 + 0.373466121463214 NA Intergenic CpG -1909 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-2 chr11 5541510 5542148 + 0.373466121463214 NA intron (NM_134033, intron 1 of 4) CpG 388 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-3 chr12 25131558 25132044 + 0.373466121463214 NA non-coding (NR_045844, exon 3 of 3) non-coding (NR_045844, exon 3 of 3) 2627 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-6 chr7 112378818 112379419 + 0.373466121463214 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 10810 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-3 chr4 137498639 137499375 + 0.373466121463214 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 30204 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-4 chr15 100468621 100469257 + 0.373466121463214 NA promoter-TSS (NM_001357982) promoter-TSS (NM_001357982) -72 NM_001357983 68614 Mm.275272 NM_134093 ENSMUSG00000037353 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 protein-coding common_peak2_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-5 chr7 112376874 112377241 + 0.373466121463214 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 8749 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_42_40_-0.211309474408652_5.25189726741376_0.373466121463214 chr12 86827244 86827802 + 0.373466121463214 NA Intergenic RSINE1|SINE|B4 57291 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-9 chr9 44773088 44773529 + 0.373466121463214 NA intron (NM_023831, intron 1 of 11) intron (NM_023831, intron 1 of 11) 299 NM_023831 76568 Mm.278597 NM_023831 ENSMUSG00000002031 Ift46 1500035H01Rik|AA408110|AI663846|R75047|c11orf2 intraflagellar transport 46 protein-coding common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214 chr1 89657059 89657651 + 0.373466121463214 NA intron (NM_001037136, intron 6 of 16) intron (NM_001037136, intron 6 of 16) 26537 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-7 chr4 152039368 152039952 + 0.373466121463214 NA exon (NM_028727, exon 1 of 12) exon (NM_028727, exon 1 of 12) 339 NM_028727 74035 Mm.275803 NM_028727 ENSMUSG00000028948 Nol9 4632412I24Rik|6030462G04Rik|AI449622|AW490720 nucleolar protein 9 protein-coding common_peak2_42_40_-0.211309474408652_5.25189726741376_0.373466121463214-4 chr5 30869645 30870153 + 0.373466121463214 NA intron (NM_144525, intron 1 of 16) CpG 320 NM_144525 68796 Mm.205169 NM_144525 ENSMUSG00000038828 Tmem214 1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280 transmembrane protein 214 protein-coding common_peak1_41_40_-0.245017308598704_5.23504335031873_0.373466121463214-2 chr8 111933325 111933782 + 0.373466121463214 NA intron (NM_001357348, intron 1 of 7) CpG-14527 260 NM_001357348 234740 Mm.87513 NM_001033321 ENSMUSG00000031951 Tmem231 4932417I16Rik|Gm178 transmembrane protein 231 protein-coding common_peak1_47_35_0.133895665429693_5.23687283415716_0.373466121463208-4 chr6 128424730 128425061 + 0.373466121463208 NA promoter-TSS (NM_133927) promoter-TSS (NM_133927) 15 NM_133927 101142 Mm.31345 NM_133927 ENSMUSG00000001518 Itfg2 2700050P07Rik|AI646725 integrin alpha FG-GAP repeat containing 2 protein-coding common_peak2_48_35_0.163433141923742_5.25164157240418_0.373466121463208-3 chr19 53482005 53482632 + 0.373466121463208 NA Intergenic Intergenic -17522 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_48_35_0.163433141923742_5.25164157240418_0.373466121463208-2 chr13 63046889 63047391 + 0.373466121463208 NA intron (NM_001289926, intron 3 of 15) intron (NM_001289926, intron 3 of 15) 82247 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_48_35_0.163433141923742_5.25164157240418_0.373466121463208-2 chr19 8819557 8819795 + 0.373466121463208 NA promoter-TSS (NM_027412) promoter-TSS (NM_027412) 275 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak1_47_35_0.133895665429693_5.23687283415716_0.373466121463208-5 chr8 95081390 95082036 + 0.373466121463208 NA intron (NM_028805, intron 1 of 19) intron (NM_028805, intron 1 of 19) 512 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_47_35_0.133895665429693_5.23687283415716_0.373466121463208-3 chr2 165387836 165388317 + 0.373466121463208 NA 5' UTR (NM_178411, exon 1 of 5) 5' UTR (NM_178411, exon 1 of 5) 183 NM_178411 228876 Mm.26316 NM_178411 ENSMUSG00000017667 Zfp334 D2Ertd535e zinc finger protein 334 protein-coding common_peak1_47_35_0.133895665429693_5.23687283415716_0.373466121463208-2 chr17 13479177 13479699 + 0.373466121463208 NA Intergenic Intergenic -42018 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo common_peak1_48_35_0.163433141923742_5.25164157240418_0.373466121463208 chr10 7211320 7212068 + 0.373466121463208 NA 5' UTR (NM_172546, exon 1 of 13) 5' UTR (NM_172546, exon 1 of 13) 543 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_47_35_0.133895665429693_5.23687283415716_0.373466121463208-2 chr19 8880329 8880879 + 0.373466121463208 NA exon (NM_001160356, exon 2 of 2) exon (NM_001160356, exon 2 of 2) 329 NM_001160356 107197 Mm.381181 NM_001160356 ENSMUSG00000071654 Uqcc3 AI462493|Cbp4 ubiquinol-cytochrome c reductase complex assembly factor 3 protein-coding common_peak2_47_35_0.133895665429693_5.23687283415716_0.373466121463208-3 chr19 60955247 60955778 + 0.373466121463208 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 65763 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_48_35_0.163433141923742_5.25164157240418_0.373466121463208 chr10 23185098 23185602 + 0.373466121463208 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 164540 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak2_48_35_0.163433141923742_5.25164157240418_0.373466121463208-4 chr3 144090915 144091321 + 0.373466121463208 NA Intergenic Intergenic 111214 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_48_35_0.163433141923742_5.25164157240418_0.373466121463208-4 chr7 79287474 79287976 + 0.373466121463208 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 14459 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_47_35_0.133895665429693_5.23687283415716_0.373466121463208 chr11 118327629 118328481 + 0.373466121463208 NA intron (NM_011594, intron 1 of 4) (TGGA)n|Simple_repeat|Simple_repeat 14479 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding common_peak1_47_35_0.133895665429693_5.23687283415716_0.373466121463208 chr12 21111956 21112593 + 0.373466121463208 NA intron (NM_001004364, intron 1 of 26) CpG 518 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_48_35_0.163433141923742_5.25164157240418_0.373466121463208-3 chr17 34604361 34604942 + 0.373466121463208 NA Intergenic Intergenic -1090 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding common_peak2_69_51_0.143861294831467_5.77237036555683_0.373449689110125-2 chr16 33921912 33922998 + 0.373449689110125 NA intron (NM_001145884, intron 10 of 14) intron (NM_001145884, intron 10 of 14) 44583 NM_001348087 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding common_peak2_68_51_0.123249185882617_5.7620643110824_0.373449689110125-3 chr15 98953058 98953466 + 0.373449689110125 NA intron (NM_011653, intron 1 of 3) CpG 239 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak1_61_57_-0.18753145557479_5.76421526734018_0.373449689110125 chr1 77538213 77539193 + 0.373449689110125 NA Intergenic Intergenic -23615 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding common_peak1_68_51_0.123249185882617_5.7620643110824_0.373449689110125-6 chr7 67372869 67373373 + 0.373449689110125 NA promoter-TSS (NM_001291191) promoter-TSS (NM_001291191) -263 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak2_68_51_0.123249185882617_5.7620643110824_0.373449689110125-2 chr13 95616649 95617577 + 0.373449689110125 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 1353 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak2_69_51_0.143861294831467_5.77237036555683_0.373449689110125-3 chr8 115081949 115082820 + 0.373449689110125 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 624510 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_68_51_0.123249185882617_5.7620643110824_0.373449689110125-3 chr19 18747995 18748672 + 0.373449689110125 NA Intergenic Intergenic -1650 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_68_51_0.123249185882617_5.7620643110824_0.373449689110125-4 chr2 167015334 167015871 + 0.373449689110125 NA intron (NM_153065, intron 1 of 20) intron (NM_153065, intron 1 of 20) 289 NM_153065 228889 Mm.295031 NM_153065 ENSMUSG00000017999 Ddx27 C86129 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein-coding common_peak2_68_51_0.123249185882617_5.7620643110824_0.373449689110125-4 chr2 28524244 28525276 + 0.373449689110125 NA intron (NM_009058, intron 1 of 17) intron (NM_009058, intron 1 of 17) -8704 NM_001145835 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak1_61_57_-0.18753145557479_5.76421526734018_0.373449689110125-2 chr15 58214145 58214867 + 0.373449689110125 NA exon (NM_026346, exon 1 of 9) exon (NM_026346, exon 1 of 9) 386 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak2_68_51_0.123249185882617_5.7620643110824_0.373449689110125 chr11 74837283 74838371 + 0.373449689110125 NA intron (NM_010813, intron 4 of 5) CpG 6903 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_69_51_0.143861294831467_5.77237036555683_0.373449689110125 chr10 60002515 60003095 + 0.373449689110125 NA promoter-TSS (NM_001199187) promoter-TSS (NM_001199187) 0 NM_026937 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding common_peak1_68_51_0.123249185882617_5.7620643110824_0.373449689110125-2 chr16 4683848 4684582 + 0.373449689110125 NA exon (NM_023646, exon 1 of 12) exon (NM_023646, exon 1 of 12) 145 NM_001135112 83945 Mm.248337 NM_023646 ENSMUSG00000004069 Dnaja3 1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l DnaJ heat shock protein family (Hsp40) member A3 protein-coding common_peak1_61_57_-0.18753145557479_5.76421526734018_0.373449689110125-4 chr4 101264173 101265123 + 0.373449689110125 NA intron (NM_146145, intron 1 of 24) CpG 634 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_68_51_0.123249185882617_5.7620643110824_0.373449689110125 chr15 31366814 31367938 + 0.373449689110125 NA exon (NM_026153, exon 1 of 2) exon (NM_026153, exon 1 of 2) 383 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak1_61_57_-0.18753145557479_5.76421526734018_0.373449689110125-3 chr4 57845339 57846061 + 0.373449689110125 NA intron (NM_001035532, intron 1 of 3) intron (NM_001035532, intron 1 of 3) 452 NM_001035532 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak1_68_51_0.123249185882617_5.7620643110824_0.373449689110125-5 chr4 49632081 49632663 + 0.373449689110125 NA 5' UTR (NM_001163263, exon 1 of 20) 5' UTR (NM_001163263, exon 1 of 20) 312 NM_182999 109331 Mm.24765 NM_182999 ENSMUSG00000028309 Rnf20 4833430L21Rik|AW540162|C79397|mKIAA4116 ring finger protein 20 protein-coding common_peak2_84_77_-0.162969442345163_6.20391749768967_0.373439789566456 chr8 70879735 70880567 + 0.373439789566456 NA Intergenic Intergenic -6661 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak1_84_77_-0.162969442345163_6.20391749768967_0.373439789566456 chr4 62524552 62525361 + 0.373439789566456 NA promoter-TSS (NM_177607) promoter-TSS (NM_177607) 58 NM_021498 59001 Mm.27444 NM_021498 ENSMUSG00000028394 Pole3 1810034K18Rik|YBL1 polymerase (DNA directed), epsilon 3 (p17 subunit) protein-coding common_peak2_93_70_0.116859204224128_6.20817672161675_0.373439789566456-2 chr6 125096242 125097684 + 0.373439789566456 NA promoter-TSS (NR_106012) promoter-TSS (NR_106012) -61 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak1_85_77_-0.14621466822606_6.21229488474922_0.373439789566456-2 chr4 46388908 46390203 + 0.373439789566456 NA promoter-TSS (NM_029086) promoter-TSS (NM_029086) -118 NM_001347095 74753 Mm.45973 NM_029086 ENSMUSG00000028331 Trmo 5830415F09Rik|AV014846|Nap1 tRNA methyltransferase O protein-coding common_peak1_85_77_-0.14621466822606_6.21229488474922_0.373439789566456-3 chr8 117329169 117330213 + 0.373439789566456 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -19479 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_84_77_-0.162969442345163_6.20391749768967_0.373439789566456-2 chr9 13323005 13324194 + 0.373439789566456 NA Intergenic Intergenic 76643 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak2_93_70_0.116859204224128_6.20817672161675_0.373439789566456 chr16 85148958 85149749 + 0.373439789566456 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 24354 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_85_77_-0.14621466822606_6.21229488474922_0.373439789566456 chr11 88068352 88069483 + 0.373439789566456 NA intron (NM_016686, intron 1 of 5) CpG 638 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding common_peak2_84_77_-0.162969442345163_6.20391749768967_0.373439789566456-2 chr9 65561383 65562506 + 0.373439789566456 NA intron (NM_153119, intron 3 of 5) intron (NM_153119, intron 3 of 5) 18143 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_85_77_-0.14621466822606_6.21229488474922_0.373439789566456 chr1 44147407 44148661 + 0.373439789566456 NA 5' UTR (NM_011729, exon 1 of 15) 5' UTR (NM_011729, exon 1 of 15) 290 NM_011729 22592 Mm.2213 NM_011729 ENSMUSG00000026048 Ercc5 Xpg excision repair cross-complementing rodent repair deficiency, complementation group 5 protein-coding common_peak2_121_92_0.100942278621601_6.58962995041883_0.373433367857953 chr15 77892627 77893873 + 0.373433367857953 NA Intergenic MER117|DNA|hAT-Charlie 35744 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_111_100_-0.140622348106358_6.58790030869862_0.373433367857928 chr19 42090440 42091786 + 0.373433367857928 NA intron (NM_145501, intron 1 of 8) intron (NM_145501, intron 1 of 8) 678 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding common_peak2_142_126_-0.121066133511032_6.92815162001665_0.373428966735395 chr2 180232500 180234178 + 0.373428966735395 NA Intergenic Intergenic -7480 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_216_188_-0.0971888146674047_7.51364801688737_0.373026694015423 chr12 51828592 51830050 + 0.373026694015423 NA 5' UTR (NM_144788, exon 1 of 43) 5' UTR (NM_144788, exon 1 of 43) 215 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding common_peak2_190_146_0.0825578401106526_7.24095126489169_0.372946200950652 chr8 25518815 25520602 + 0.372946200950652 NA intron (NM_001079908, intron 1 of 17) intron (NM_001079908, intron 1 of 17) 949 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak1_191_146_0.0900383628891532_7.24469152628094_0.372946200950652 chr13 49297574 49299006 + 0.372946200950652 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 10918 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_191_146_0.0900383628891532_7.24469152628094_0.372946200950652 chr5 125177554 125179120 + 0.372946200950652 NA intron (NM_001253905, intron 1 of 42) CpG 877 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_143_127_-0.122398710473783_6.93880064476311_0.372837687558178 chr11 120990097 120991231 + 0.372837687558178 NA intron (NM_027874, intron 1 of 9) intron (NM_027874, intron 1 of 9) 669 NM_139059 104318 Mm.216227 NM_027874 ENSMUSG00000025162 Csnk1d 1200006A05Rik|AA409348|D930010H05Rik casein kinase 1, delta protein-coding common_peak1_154_118_0.0882336954254725_6.93893461102068_0.372837687558178 chr10 82860063 82862121 + 0.372837687558178 NA intron (NM_001042513, intron 2 of 14) intron (NM_001042513, intron 2 of 14) 751 NM_001042514 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak2_113_101_-0.129481264772139_6.60768470958543_0.372686515575375-2 chr12 27342934 27344037 + 0.372686515575375 NA promoter-TSS (NM_009234) promoter-TSS (NM_009234) -767 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_113_101_-0.129481264772139_6.60768470958543_0.372686515575375-3 chr13 70794524 70795668 + 0.372686515575375 NA intron (NM_172053, intron 6 of 22) (CA)n|Simple_repeat|Simple_repeat 46715 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak2_113_101_-0.129481264772139_6.60768470958543_0.372686515575375 chr1 184731537 184732533 + 0.372686515575375 NA exon (NM_008250, exon 1 of 4) exon (NM_008250, exon 1 of 4) 458 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox protein-coding common_peak2_113_101_-0.129481264772139_6.60768470958543_0.372686515575375-4 chr16 92624397 92625368 + 0.372686515575375 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 72447 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_122_93_0.0972063181502554_6.60319201075277_0.372686515575326-2 chr18 60612290 60613419 + 0.372686515575326 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) -2750 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_123_93_0.1088057083019_6.60899170582859_0.372686515575326 chr7 98485056 98486489 + 0.372686515575326 NA Intergenic Intergenic -8450 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_122_93_0.0972063181502554_6.60319201075277_0.372686515575326 chr16 49969720 49971157 + 0.372686515575326 NA Intergenic Intergenic -10022 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak2_123_93_0.1088057083019_6.60899170582859_0.372686515575326 chr15 5194846 5195919 + 0.372686515575326 NA intron (NM_001355621, intron 3 of 5) intron (NM_001355621, intron 3 of 5) 9822 NM_001355621 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_179_157_-0.106522559897008_7.2505194682286_0.372472896684602 chr8 109692450 109693825 + 0.372472896684602 NA intron (NR_155034, intron 1 of 10) CpG 157 NR_155034 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak2_94_71_0.111840372283469_6.22584518758405_0.372467125080179-2 chr6 54816626 54817901 + 0.372467125080179 NA exon (NM_199143, exon 1 of 5) exon (NM_199143, exon 1 of 5) 347 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_86_78_-0.148032124572382_6.22976468589091_0.372467125080179 chr1 182368302 182369463 + 0.372467125080179 NA Intergenic Intergenic -27276 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_94_71_0.111840372283469_6.22584518758405_0.372467125080179 chr1 43146287 43147428 + 0.372467125080179 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 17104 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_86_78_-0.148032124572382_6.22976468589091_0.372467125080179 chr10 94198646 94199516 + 0.372467125080179 NA promoter-TSS (NM_025551) promoter-TSS (NM_025551) 72 NM_025551 66414 Mm.27886 NM_025551 ENSMUSG00000020022 Ndufa12 2410011G03Rik|AW112974 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 protein-coding common_peak1_86_78_-0.148032124572382_6.22976468589091_0.372467125080179-2 chr8 33673238 33674240 + 0.372467125080179 NA intron (NM_010344, intron 4 of 12) intron (NM_010344, intron 4 of 12) 20501 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak2_86_78_-0.148032124572382_6.22976468589091_0.372467125080179-2 chr3 122984740 122985220 + 0.372467125080179 NA promoter-TSS (NM_133857) promoter-TSS (NM_133857) -533 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak2_94_71_0.111840372283469_6.22584518758405_0.372467125080179 chr1 4857769 4858433 + 0.372467125080179 NA promoter-TSS (NM_001159751) promoter-TSS (NM_001159751) -227 NM_001159751 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding common_peak1_233_179_0.0812463234338603_7.53247625804661_0.372246009418204 chr7 73555956 73558459 + 0.372246009418204 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 1188 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_232_179_0.0751113382246524_7.529408765442_0.372246009418204 chr15 81810401 81812742 + 0.372246009418204 NA exon (NM_017376, exon 1 of 4) exon (NM_017376, exon 1 of 4) 157 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak2_359_306_-0.0718916366633291_8.22614902703851_0.372208503956727 chr5 125389238 125393037 + 0.372208503956727 NA Intergenic Intergenic -1120 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-5 chr9 102951160 102952009 + 0.372131646957075 NA Intergenic Intergenic -56905 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-2 chr4 120951123 120952097 + 0.372131646957075 NA promoter-TSS (NM_001005788) promoter-TSS (NM_001005788) 91 NM_001005788 381549 Mm.331840 NM_001005788 ENSMUSG00000064141 Zfp69 Gm1029|Krab2|Zfp63 zinc finger protein 69 protein-coding common_peak2_62_58_-0.189272751115007_5.78800667380434_0.372131646957075 chr11 68853500 68854204 + 0.372131646957075 NA promoter-TSS (NM_023668) promoter-TSS (NM_023668) -721 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak2_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-3 chr2 30718755 30719325 + 0.372131646957075 NA Intergenic Intergenic -2170 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-4 chr8 122990245 122991154 + 0.372131646957075 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 51585 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-4 chr8 11264258 11264844 + 0.372131646957075 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -48254 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_62_58_-0.189272751115007_5.78800667380434_0.372131646957075 chr4 117119772 117120367 + 0.372131646957075 NA non-coding (NR_024078, exon 7 of 7) non-coding (NR_024078, exon 7 of 7) 5656 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak2_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-2 chr11 72144655 72145812 + 0.372131646957075 NA Intergenic Intergenic -9344 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak1_62_58_-0.189272751115007_5.78800667380434_0.372131646957075-3 chr6 38532685 38533359 + 0.372131646957075 NA Intergenic Intergenic -1839 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak1_70_52_0.136700287143532_5.79627059813497_0.372131646957063-2 chr11 117348941 117350164 + 0.372131646957063 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 17239 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_70_52_0.136700287143532_5.79627059813497_0.372131646957063-3 chr4 115827855 115828871 + 0.372131646957063 NA intron (NM_175308, intron 1 of 3) CpG 271 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding common_peak2_70_52_0.136700287143532_5.79627059813497_0.372131646957063-2 chr2 118746053 118746723 + 0.372131646957063 NA exon (NM_001301269, exon 1 of 1) exon (NM_001301269, exon 1 of 1) 630 NM_001301269 100043272 Mm.398072 NM_001301269 ENSMUSG00000074918 Inafm2 5430417L22Rik InaF motif containing 2 protein-coding common_peak1_70_52_0.136700287143532_5.79627059813497_0.372131646957063 chr11 97427553 97428175 + 0.372131646957063 NA Intergenic Intergenic -22296 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_70_52_0.136700287143532_5.79627059813497_0.372131646957063 chr11 4135195 4136045 + 0.372131646957063 NA intron (NM_027859, intron 1 of 8) intron (NM_027859, intron 1 of 8) 460 NM_027859 71673 Mm.240586 NM_027859 ENSMUSG00000003581 Rnf215 0610009J22Rik|AW557025|C77903 ring finger protein 215 protein-coding common_peak2_262_226_-0.0860839447482631_7.78350651491678_0.372105177932723 chr18 7868304 7870225 + 0.372105177932723 NA promoter-TSS (NM_001146298) promoter-TSS (NM_001146298) 67 NM_153085 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak1_181_158_-0.0997956904016011_7.26298511008356_0.372005782731185 chr7 144937852 144939652 + 0.372005782731185 NA intron (NM_007631, intron 1 of 4) intron (NM_007631, intron 1 of 4) 1173 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak2_124_94_0.105045173001995_6.62237819483195_0.371954918022231 chr15 77838603 77840092 + 0.371954918022231 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 2828 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_220_191_-0.0937434722938741_7.53809076457422_0.371861982730166 chr13 110394209 110396681 + 0.371861982730166 NA intron (NM_152804, intron 1 of 13) CpG 401 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak2_234_180_0.0793623558262384_7.53952706499632_0.371861982730166 chr2 173260136 173261466 + 0.371861982730166 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 15732 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_416_353_-0.066847876045701_8.43418161206015_0.37174195965251 chr15 97836166 97840841 + 0.37174195965251 NA intron (NM_001204280, intron 1 of 21) MIR3|SINE|MIR 5999 NM_001204279 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_146_129_-0.11522904700819_6.96475328952436_0.371683643475057 chr8 64541291 64542480 + 0.371683643475057 NA Intergenic Intergenic -27444 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-6 chr9 79214909 79215353 + 0.37158197664092 NA Intergenic Intergenic 304171 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA common_peak2_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-2 chr16 57550762 57551397 + 0.37158197664092 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 1837 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-2 chr18 46524328 46524987 + 0.37158197664092 NA 5' UTR (NM_173423, exon 2 of 3) 5' UTR (NM_173423, exon 2 of 3) 1314 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak1_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-2 chr2 30658754 30659363 + 0.37158197664092 NA intron (NR_136917, intron 3 of 3) intron (NR_136917, intron 3 of 3) 18953 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak2_49_36_0.152845496523359_5.28587611389063_0.37158197664092-3 chr6 51119732 51120189 + 0.37158197664092 NA Intergenic Intergenic 149950 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak1_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-3 chr4 139202498 139202940 + 0.37158197664092 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 8608 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_43_41_-0.2131420201817_5.28574641268791_0.37158197664092 chr14 20147543 20148040 + 0.37158197664092 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 33991 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-4 chr4 141077710 141078259 + 0.37158197664092 NA intron (NR_149724, intron 1 of 8) CpG 373 NR_149724 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898|NECAP-2 NECAP endocytosis associated 2 protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-4 chr18 61092658 61093074 + 0.37158197664092 NA Intergenic Intergenic -12706 NM_001037859 12978 Mm.22574 NM_007779 ENSMUSG00000024621 Csf1r AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fim2|Fms|M-CSF-R|M-CSFR colony stimulating factor 1 receptor protein-coding common_peak1_43_41_-0.2131420201817_5.28574641268791_0.37158197664092 chr13 59656865 59657355 + 0.37158197664092 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 18674 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-3 chr18 60731424 60731870 + 0.37158197664092 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 1494 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-6 chr4 63402734 63403586 + 0.37158197664092 NA intron (NM_001045514, intron 1 of 21) intron (NM_001045514, intron 1 of 21) 285 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-3 chr4 88773376 88773751 + 0.37158197664092 NA promoter-TSS (NM_001243155) promoter-TSS (NM_001243155) -271 NM_001243155 545646 Mm.380019 NM_001243155 ENSMUSG00000094271 Gm13290 - predicted gene 13290 protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-5 chr3 57510575 57511068 + 0.37158197664092 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 65055 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-4 chr4 152027106 152027584 + 0.37158197664092 NA TTS (NM_031867) TTS (NM_031867) 326 NM_133879 100090 Mm.24661 NM_133879 ENSMUSG00000028952 Zbtb48 0610011D15Rik|AI327031|Hkr3|TZAP zinc finger and BTB domain containing 48 protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092 chr16 77013791 77014418 + 0.37158197664092 NA promoter-TSS (NM_013918) promoter-TSS (NM_013918) 35 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding common_peak2_49_36_0.152845496523359_5.28587611389063_0.37158197664092 chr10 9900692 9901194 + 0.37158197664092 NA promoter-TSS (NM_001081344) promoter-TSS (NM_001081344) 97 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding common_peak2_49_36_0.152845496523359_5.28587611389063_0.37158197664092-2 chr5 139483824 139484406 + 0.37158197664092 NA intron (NM_001159908, intron 1 of 6) intron (NM_001159908, intron 1 of 6) 376 NM_133349 100494 Mm.24521 NM_133349 ENSMUSG00000053581 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A protein-coding common_peak1_43_41_-0.2131420201817_5.28574641268791_0.37158197664092-5 chr7 126566024 126566337 + 0.37158197664092 NA 5' UTR (NM_146200, exon 2 of 21) 5' UTR (NM_146200, exon 2 of 21) 186 NM_146200 56347 Mm.22776 NM_146200 ENSMUSG00000030738 Eif3c 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl eukaryotic translation initiation factor 3, subunit C protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-8 chr8 70792102 70792431 + 0.37158197664092 NA exon (NM_199308, exon 1 of 26) exon (NM_199308, exon 1 of 26) 167 NM_199308 546071 Mm.250731 NM_199308 ENSMUSG00000031833 Mast3 BC024265|mKIAA0561 microtubule associated serine/threonine kinase 3 protein-coding common_peak1_49_36_0.152845496523359_5.28587611389063_0.37158197664092-7 chr5 142963756 142964096 + 0.37158197664092 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 3571 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak2_96_72_0.12178599553106_6.25071755664555_0.371520254652761-2 chr19 18713062 18713814 + 0.371520254652761 NA exon (NM_177640, exon 1 of 2) exon (NM_177640, exon 1 of 2) 202 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak1_95_72_0.106941128418745_6.24329512308939_0.371520254652761-3 chr5 35893467 35894234 + 0.371520254652761 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 531 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding common_peak2_96_72_0.12178599553106_6.25071755664555_0.371520254652761-3 chr19 40257096 40258143 + 0.371520254652761 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 13997 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak1_95_72_0.106941128418745_6.24329512308939_0.371520254652761-2 chr1 185204087 185205123 + 0.371520254652761 NA intron (NM_001163754, intron 1 of 34) intron (NM_001163754, intron 1 of 34) 437 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_96_72_0.12178599553106_6.25071755664555_0.371520254652761 chr10 36974241 36974937 + 0.371520254652761 NA promoter-TSS (NM_008229) promoter-TSS (NM_008229) 45 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding common_peak2_87_79_-0.149807671863547_6.24702425895559_0.371520254652761 chr15 31531157 31531812 + 0.371520254652761 NA promoter-TSS (NM_172606) promoter-TSS (NM_172606) -447 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak2_95_72_0.106941128418745_6.24329512308939_0.371520254652761 chr1 71937752 71938754 + 0.371520254652761 NA Intergenic Intergenic 50141 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_96_72_0.12178599553106_6.25071755664555_0.371520254652761 chr13 56702493 56703371 + 0.371520254652761 NA promoter-TSS (NM_001164042) promoter-TSS (NM_001164042) -78 NM_008541 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak1_95_72_0.106941128418745_6.24329512308939_0.371520254652761 chr1 71556580 71557652 + 0.371520254652761 NA promoter-TSS (NM_026195) promoter-TSS (NM_026195) -40 NM_026195 108147 Mm.38010 NM_026195 ENSMUSG00000026192 Atic 2610509C24Rik|AA536954|AW212393 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding common_peak2_235_181_0.0774964859774947_7.54654288318744_0.371482076092342 chr10 128919170 128921397 + 0.371482076092342 NA promoter-TSS (NM_134006) promoter-TSS (NM_134006) -986 NM_134006 19682 Mm.439856 NM_134006 ENSMUSG00000025350 Rdh5 9-cis|AI987873|RDH4|cRDH retinol dehydrogenase 5 protein-coding common_peak1_71_53_0.129768766935992_5.81977188563146_0.370860746697923-3 chr5 36292517 36293088 + 0.370860746697923 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) -8768 NR_106162 102465792 NR_106162 ENSMUSG00000098884 Mir7689 Gm27434|mmu-mir-7689 microRNA 7689 ncRNA common_peak2_71_53_0.129768766935992_5.81977188563146_0.370860746697923-4 chr5 118559607 118560404 + 0.370860746697923 NA promoter-TSS (NM_172424) promoter-TSS (NM_172424) -714 NM_001347445 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_71_53_0.129768766935992_5.81977188563146_0.370860746697923 chr14 21750102 21751260 + 0.370860746697923 NA promoter-TSS (NM_001359953) promoter-TSS (NM_001359953) 150 NM_001359954 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding common_peak2_71_53_0.129768766935992_5.81977188563146_0.370860746697923 chr10 83543574 83544390 + 0.370860746697923 NA promoter-TSS (NM_001033375) promoter-TSS (NM_001033375) 41 NM_001033375 319277 Mm.491194 NM_001033375 ENSMUSG00000034560 Washc4 A230046K03Rik|AA589518|Kiaa1033|mKIAA1033 WASH complex subunit 4 protein-coding common_peak2_71_53_0.129768766935992_5.81977188563146_0.370860746697923-3 chr14 121248020 121248460 + 0.370860746697923 NA promoter-TSS (NR_155502) promoter-TSS (NR_155502) -466 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak1_71_53_0.129768766935992_5.81977188563146_0.370860746697923-2 chr19 40487025 40488272 + 0.370860746697923 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 26088 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_71_53_0.129768766935992_5.81977188563146_0.370860746697923-2 chr14 25534201 25534940 + 0.370860746697923 NA TTS (NR_037236) TTS (NR_037236) 131 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_63_59_-0.190960510537211_5.81141034033991_0.370860746697911 chr2 79635490 79636195 + 0.370860746697911 NA intron (NM_080558, intron 1 of 17) CpG 417 NM_080558 70599 Mm.272881 NM_080558 ENSMUSG00000027007 Ssfa2 5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927 sperm specific antigen 2 protein-coding common_peak1_64_59_-0.168750501972771_5.82251534462213_0.370860746697911 chr19 34198471 34199448 + 0.370860746697911 NA intron (NM_001360718, intron 1 of 10) intron (NM_001360718, intron 1 of 10) 6025 NM_001360718 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak1_64_59_-0.168750501972771_5.82251534462213_0.370860746697911-3 chr8 68307580 68308238 + 0.370860746697911 NA intron (NM_028182, intron 4 of 8) intron (NM_028182, intron 4 of 8) 31381 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak1_63_59_-0.190960510537211_5.81141034033991_0.370860746697911-2 chr7 49600929 49601564 + 0.370860746697911 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 35589 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_64_59_-0.168750501972771_5.82251534462213_0.370860746697911 chr7 49600896 49601567 + 0.370860746697911 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 35604 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_64_59_-0.168750501972771_5.82251534462213_0.370860746697911-2 chr7 19664155 19664953 + 0.370860746697911 NA intron (NM_019649, intron 1 of 13) intron (NM_019649, intron 1 of 13) 476 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding common_peak2_63_59_-0.190960510537211_5.81141034033991_0.370860746697911-3 chr6 11907201 11907762 + 0.370860746697911 NA promoter-TSS (NM_010886) promoter-TSS (NM_010886) -31 NM_010886 17992 Mm.415865 NM_010886 ENSMUSG00000029632 Ndufa4 MLRQ NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 protein-coding common_peak1_63_59_-0.190960510537211_5.81141034033991_0.370860746697911 chr13 113841240 113842256 + 0.370860746697911 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 47240 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak2_63_59_-0.190960510537211_5.81141034033991_0.370860746697911-2 chr4 155236567 155237698 + 0.370860746697911 NA Intergenic Intergenic -12834 NM_001190445 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_97_73_0.116849798163861_6.26787826471088_0.370598165309234 chr6 125349797 125350595 + 0.370598165309234 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 473 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-6 chr3 40949897 40950368 + 0.370591422759391 NA promoter-TSS (NM_001040399) promoter-TSS (NM_001040399) -499 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-8 chr2 4651796 4652093 + 0.370591422759391 NA exon (NM_001356451, exon 1 of 11) exon (NM_001356451, exon 1 of 11) 191 NM_026045 67229 Mm.38529 NM_026045 ENSMUSG00000039449 Prpf18 2810441A10Rik pre-mRNA processing factor 18 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-3 chr14 46884703 46885025 + 0.370591422759391 NA exon (NM_028966, exon 2 of 12) exon (NM_028966, exon 2 of 12) 1899 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391 chr1 54438476 54438765 + 0.370591422759391 NA intron (NM_001033194, intron 1 of 17) intron (NM_001033194, intron 1 of 17) 406 NM_001033194 98488 Mm.25856 NM_001033194 ENSMUSG00000041303 Gtf3c3 TF3C-gamma|TFIIIC102 general transcription factor IIIC, polypeptide 3 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-14 chr2 144556349 144556821 + 0.370591422759391 NA 5' UTR (NM_001355379, exon 1 of 20) 5' UTR (NM_001355379, exon 1 of 20) 356 NM_001355380 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-5 chr11 78383138 78383466 + 0.370591422759391 NA intron (NM_008238, intron 1 of 8) intron (NM_008238, intron 1 of 8) 3306 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-4 chr19 32320050 32320573 + 0.370591422759391 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 29005 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391 chr1 194879784 194880235 + 0.370591422759391 NA Intergenic Intergenic 58008 NR_039539 100628615 NR_039539 ENSMUSG00000092633 Mir3962 mmu-mir-3962|mu-mir-3962 microRNA 3962 ncRNA common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391-2 chr13 23561716 23562086 + 0.370591422759391 NA TTS (NM_178205) TTS (NM_178205) 464 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-2 chr1 186444213 186444691 + 0.370591422759391 NA Intergenic Intergenic 114229 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-9 chr8 35667328 35667695 + 0.370591422759391 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -78491 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-17 chr5 112277866 112278301 + 0.370591422759391 NA intron (NM_001326590, intron 1 of 5) PB1D10|SINE|Alu 1392 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-11 chr4 148444484 148444696 + 0.370591422759391 NA 5' UTR (NM_027873, exon 1 of 2) 5' UTR (NM_027873, exon 1 of 2) 161 NM_027873 71707 Mm.292503 NM_027873 ENSMUSG00000047719 Ubiad1 1200002M06Rik|AI426463|AW320947|Tere1 UbiA prenyltransferase domain containing 1 protein-coding unique_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391 chr12 113148420 113148985 + 0.370591422759391 NA Intergenic Intergenic -3310 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-7 chr11 114829338 114829651 + 0.370591422759391 NA Intergenic Intergenic -22038 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding unique_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391 chr1 165281909 165282352 + 0.370591422759391 NA Intergenic CpG -13636 NM_001310429 240888 Mm.329929 NM_001081126 ENSMUSG00000040836 Gpr161 Gm208|Gm208Gpr|vl G protein-coupled receptor 161 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-3 chr11 72144677 72145085 + 0.370591422759391 NA Intergenic Intergenic -8992 NM_001081641 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-17 chr9 85326630 85327238 + 0.370591422759391 NA intron (NM_001160379, intron 1 of 2) CpG 190 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-8 chr12 77949068 77949590 + 0.370591422759391 NA Intergenic Intergenic -277326 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-14 chr7 80370853 80371314 + 0.370591422759391 NA intron (NM_172903, intron 1 of 23) CpG-13291 292 NM_172903 140481 Mm.269245 NM_172903 ENSMUSG00000038886 Man2a2 1700052O22Rik|4931438M07Rik|AI480988|MX|Man IIx mannosidase 2, alpha 2 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-6 chr19 8803807 8804166 + 0.370591422759391 NA exon (NM_001098237, exon 2 of 2) exon (NM_001098237, exon 2 of 2) 1456 NM_001098237 75291 Mm.23423 NM_133759 ENSMUSG00000071661 Zbtb3 4930563M09Rik zinc finger and BTB domain containing 3 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-2 chr12 86888975 86889239 + 0.370591422759391 NA Intergenic Intergenic -4293 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391-5 chr3 126385549 126385769 + 0.370591422759391 NA intron (NM_173451, intron 1 of 1) intron (NM_173451, intron 1 of 1) 21807 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-18 chr7 28392130 28392623 + 0.370591422759391 NA promoter-TSS (NM_019458) promoter-TSS (NM_019458) 314 NM_026042 67224 Mm.41647 NM_026042 ENSMUSG00000003444 Med29 2810405O22Rik|AU020902|Ixl mediator complex subunit 29 protein-coding common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-7 chr4 141060980 141061538 + 0.370591422759391 NA promoter-TSS (NM_001145958) promoter-TSS (NM_001145958) -714 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-11 chr17 80790041 80790393 + 0.370591422759391 NA Intergenic Intergenic -62192 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-4 chr11 75904606 75905007 + 0.370591422759391 NA intron (NM_001291159, intron 4 of 4) intron (NM_001291159, intron 4 of 4) 6253 NM_029548 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391 chr10 24492911 24493510 + 0.370591422759391 NA Intergenic Intergenic -102232 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-15 chr7 110003321 110003795 + 0.370591422759391 NA intron (NR_037959, intron 2 of 2) intron (NR_037959, intron 2 of 2) 3088 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-5 chr19 57199912 57200270 + 0.370591422759391 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) -2460 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-4 chr16 73483051 73483703 + 0.370591422759391 NA Intergenic Intergenic 820228 NM_019413 19876 Mm.310772 NM_019413 ENSMUSG00000022883 Robo1 AW494633|AW742721|DUTT1|Gm310 roundabout guidance receptor 1 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-10 chr17 75254650 75255210 + 0.370591422759391 NA intron (NM_019919, intron 9 of 33) intron (NM_019919, intron 9 of 33) 76149 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-12 chr4 156192772 156193073 + 0.370591422759391 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 4566 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-2 chr11 115813255 115813576 + 0.370591422759391 NA intron (NM_080643, intron 1 of 19) CpG 177 NM_080643 140721 Mm.383737 NM_080643 ENSMUSG00000034471 Caskin2 1600028L06Rik|mKIAA1139 CASK-interacting protein 2 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-6 chr11 91065748 91066122 + 0.370591422759391 NA Intergenic Intergenic 261244 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391-6 chr6 5442363 5442701 + 0.370591422759391 NA Intergenic Intergenic 52122 NM_001355662 65255 Mm.51340 NM_023048 ENSMUSG00000042607 Asb4 8430401O13Rik|AV117194|AW060255 ankyrin repeat and SOCS box-containing 4 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-10 chr4 41123816 41124111 + 0.370591422759391 NA intron (NM_139236, intron 1 of 25) intron (NM_139236, intron 1 of 25) 376 NM_139236 230082 Mm.285797 NM_139236 ENSMUSG00000028430 Nol6 AA410091|Nrap nucleolar protein family 6 (RNA-associated) protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-9 chr2 84493864 84494257 + 0.370591422759391 NA Intergenic Intergenic 12813 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-10 chrX 109141751 109142237 + 0.370591422759391 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 46587 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-13 chr2 130563813 130564387 + 0.370591422759391 NA promoter-TSS (NR_040348) promoter-TSS (NR_040348) 343 NM_207207 99045 Mm.30057 NM_207207 ENSMUSG00000037740 Mrps26 AI648866|GI008|MRP-S13|MRP-S26|Rpms13 mitochondrial ribosomal protein S26 protein-coding common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391-7 chr7 29505286 29505705 + 0.370591422759391 NA promoter-TSS (NM_001081028) promoter-TSS (NM_001081028) -35 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-5 chr18 38171478 38171926 + 0.370591422759391 NA Intergenic Intergenic 38060 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-12 chr2 33206375 33206766 + 0.370591422759391 NA intron (NM_001290570, intron 7 of 16) intron (NM_001290570, intron 7 of 16) -9391 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391-4 chr19 56935329 56935661 + 0.370591422759391 NA intron (NM_001177796, intron 6 of 19) intron (NM_001177796, intron 6 of 19) 61079 NM_172840 240675 Mm.129534 NM_172840 ENSMUSG00000025082 Vwa2 Amaco von Willebrand factor A domain containing 2 protein-coding common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391 chr10 81233423 81233895 + 0.370591422759391 NA intron (NM_001034895, intron 1 of 17) intron (NM_001034895, intron 1 of 17) 496 NM_001034895 103406 Mm.158783 NM_001034895 ENSMUSG00000034949 Zfr2 2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086 zinc finger RNA binding protein 2 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-16 chr4 41722455 41723110 + 0.370591422759391 NA intron (NM_001159565, intron 1 of 5) intron (NM_001159565, intron 1 of 5) 381 NM_001159565 53598 Mm.29025 NM_016890 ENSMUSG00000028447 Dctn3 p24 dynactin 3 protein-coding common_peak2_32_23_0.182103483676602_4.67601424255946_0.370591422759391-3 chr19 37057265 37057482 + 0.370591422759391 NA intron (NM_198300, intron 8 of 10) intron (NM_198300, intron 8 of 10) -116470 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-8 chr6 8509490 8509754 + 0.370591422759391 NA promoter-TSS (NM_133236) promoter-TSS (NM_133236) 22 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-16 chr8 64658941 64659286 + 0.370591422759391 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 33996 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-9 chr13 104542515 104543132 + 0.370591422759391 NA Intergenic Intergenic 254988 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-7 chr19 29468653 29469001 + 0.370591422759391 NA intron (NM_021396, intron 5 of 5) intron (NM_021396, intron 5 of 5) 53160 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak1_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-3 chr16 58523135 58523718 + 0.370591422759391 NA promoter-TSS (NM_018784) promoter-TSS (NM_018784) 0 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_32_23_0.182103483676602_4.67601424255946_0.370591422759391-15 chr3 102507433 102507876 + 0.370591422759391 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 37735 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak2_27_27_-0.275655828265679_4.66952700792476_0.370591422759391-13 chr6 42508564 42509188 + 0.370591422759391 NA Intergenic Intergenic -21662 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak2_148_131_-0.117896722833187_6.98544575794186_0.370566114393641 chr11 3347695 3349582 + 0.370566114393641 NA exon (NM_001361623, exon 12 of 16) exon (NM_001361623, exon 12 of 16) 7503 NM_001034030 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak1_148_131_-0.117896722833187_6.98544575794186_0.370566114393641 chr7 78895981 78897039 + 0.370566114393641 NA intron (NM_001360709, intron 1 of 3) intron (NM_001360709, intron 1 of 3) 452 NM_001360709 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding common_peak2_117_104_-0.121899411916687_6.65329581170778_0.370535654535705 chr15 66882916 66883791 + 0.370535654535705 NA Intergenic Intergenic -8040 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_117_104_-0.121899411916687_6.65329581170778_0.370535654535705-2 chr5 39638133 39639514 + 0.370535654535705 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 5808 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak1_117_104_-0.121899411916687_6.65329581170778_0.370535654535705 chr18 9448738 9450005 + 0.370535654535705 NA intron (NM_026484, intron 1 of 9) intron (NM_026484, intron 1 of 9) 783 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak1_186_162_-0.0968169180886047_7.30031969518677_0.370196862676168 chr5 77357488 77359036 + 0.370196862676168 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 47778 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak2_486_410_-0.0599419502455198_8.65302360855892_0.370175970117779 chr1 132352848 132355937 + 0.370175970117779 NA Intergenic Intergenic 13556 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_150_132_-0.109684531244151_7.00044016987911_0.370020505538763 chr7 97579591 97580961 + 0.370020505538763 NA promoter-TSS (NM_001177947) promoter-TSS (NM_001177947) 380 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding common_peak1_161_123_0.0921311631674948_7.00026189197062_0.370020505538763 chr2 35199733 35200987 + 0.370020505538763 NA intron (NM_026697, intron 1 of 7) CpG 760 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak1_128_97_0.105313308748435_6.66736649848943_0.369847117739386 chr11 120632289 120633498 + 0.369847117739386 NA intron (NM_010756, intron 1 of 2) CpG 654 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_128_97_0.105313308748435_6.66736649848943_0.369847117739386-2 chr5 93092765 93093920 + 0.369847117739386 NA promoter-TSS (NM_001347377) promoter-TSS (NM_001347377) -74 NM_001009818 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_118_105_-0.123485527225861_6.66617769095027_0.369847117739361 chr9 67136809 67138219 + 0.369847117739361 NA intron (NR_045748, intron 1 of 2) intron (NR_045748, intron 1 of 2) 3953 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA common_peak1_118_105_-0.123485527225861_6.66617769095027_0.369847117739361 chr7 34312740 34313914 + 0.369847117739361 NA Intergenic CpG -27718 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding common_peak2_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-2 chr12 55124556 55125016 + 0.369793428364259 NA intron (NM_028527, intron 1 of 4) CpG 258 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-9 chr7 28277788 28278311 + 0.369793428364259 NA exon (NM_001177427, exon 1 of 1) exon (NM_001177427, exon 1 of 1) 343 NM_001177427 434156 Mm.118535 NM_001177427 ENSMUSG00000070705 Eid2b 3010005C08Rik EP300 interacting inhibitor of differentiation 2B protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-2 chr11 117822654 117823114 + 0.369793428364259 NA intron (NM_001271729, intron 2 of 5) intron (NM_001271729, intron 2 of 5) -3035 NM_027827 71562 Mm.273958 NM_027827 ENSMUSG00000017718 Afmid 9030621K19Rik|Ammd|FKF|KFA|Kf|formylase arylformamidase protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-6 chr19 53409430 53409846 + 0.369793428364259 NA Intergenic Intergenic -19004 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-8 chr4 66829015 66829646 + 0.369793428364259 NA intron (NM_021297, intron 1 of 2) intron (NM_021297, intron 1 of 2) 1779 NM_021297 21898 Mm.38049 NM_021297 ENSMUSG00000039005 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 protein-coding common_peak2_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-3 chr13 110394453 110394930 + 0.369793428364259 NA promoter-TSS (NM_152804) promoter-TSS (NM_152804) -353 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo like kinase 2 protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-10 chr7 105640617 105641283 + 0.369793428364259 NA promoter-TSS (NM_029802) promoter-TSS (NM_029802) 505 NM_001360054 14356 Mm.220330 NM_019502 ENSMUSG00000089847 Timm10b Fxc1|Tim10b|Tim9b translocase of inner mitochondrial membrane 10B protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-4 chr16 62874486 62875430 + 0.369793428364259 NA intron (NM_011173, intron 1 of 14) intron (NM_011173, intron 1 of 14) 20651 NM_011173 19128 Mm.127156 NM_011173 ENSMUSG00000022912 Pros1 AW214361 protein S (alpha) protein-coding common_peak2_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-5 chr9 99436363 99437101 + 0.369793428364259 NA promoter-TSS (NM_008624) promoter-TSS (NM_008624) -20 NM_008624 17532 Mm.2045 NM_008624 ENSMUSG00000032470 Mras 2900078C09Rik|AI326250 muscle and microspikes RAS protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-4 chr13 52675335 52675966 + 0.369793428364259 NA Intergenic Intergenic 78768 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak2_44_42_-0.214896607275514_5.31881645106434_0.369793428364259 chr11 83895892 83896468 + 0.369793428364259 NA intron (NM_009330, intron 7 of 8) (TA)n|Simple_repeat|Simple_repeat 43220 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-4 chr9 41949885 41950525 + 0.369793428364259 NA Intergenic Intergenic 127008 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-5 chr13 90796788 90797309 + 0.369793428364259 NA Intergenic Intergenic 108307 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-3 chr12 25095361 25095969 + 0.369793428364259 NA exon (NM_010496, exon 1 of 3) exon (NM_010496, exon 1 of 3) 427 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_50_37_0.142738946120321_5.31929698650375_0.369793428364259 chr5 36378910 36379415 + 0.369793428364259 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 18977 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-3 chr16 16223750 16224383 + 0.369793428364259 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 10721 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-8 chr8 124195714 124196110 + 0.369793428364259 NA Intergenic Intergenic -35482 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-2 chr13 54072070 54072819 + 0.369793428364259 NA intron (NM_027324, intron 1 of 10) intron (NM_027324, intron 1 of 10) 599 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-7 chr3 146450383 146451138 + 0.369793428364259 NA intron (NM_028836, intron 1 of 5) intron (NM_028836, intron 1 of 5) 293 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-5 chr17 53478478 53478986 + 0.369793428364259 NA promoter-TSS (NM_025887) promoter-TSS (NM_025887) -502 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259-6 chr18 60669060 60669744 + 0.369793428364259 NA non-coding (NR_045401, exon 3 of 3) non-coding (NR_045401, exon 3 of 3) 5992 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA unique_peak2_50_37_0.142738946120321_5.31929698650375_0.369793428364259 chr19 46396988 46397686 + 0.369793428364259 NA intron (NM_001025391, intron 1 of 11) CpG 441 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) SUFU negative regulator of hedgehog signaling protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259 chr1 132265119 132265578 + 0.369793428364259 NA Intergenic Intergenic -33278 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_44_42_-0.214896607275514_5.31881645106434_0.369793428364259 chr11 95105767 95106326 + 0.369793428364259 NA Intergenic Intergenic -14071 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak1_50_37_0.142738946120321_5.31929698650375_0.369793428364259-7 chr2 158232044 158232944 + 0.369793428364259 NA Intergenic Intergenic -3270 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak2_89_81_-0.153238836764745_6.28093258623571_0.369699896448768 chr13 49296093 49297035 + 0.369699896448768 NA exon (NM_015759, exon 3 of 18) exon (NM_015759, exon 3 of 18) 12644 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_65_60_-0.170726332738372_5.8453741711937_0.369634502458893 chr2 6322436 6323284 + 0.369634502458893 NA 5' UTR (NM_001080548, exon 1 of 15) 5' UTR (NM_001080548, exon 1 of 15) 103 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_65_60_-0.170726332738372_5.8453741711937_0.369634502458893-2 chr9 88092140 88093055 + 0.369634502458893 NA Intergenic Intergenic -235012 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_65_60_-0.170726332738372_5.8453741711937_0.369634502458893 chr1 155972407 155973132 + 0.369634502458893 NA intron (NM_001039184, intron 1 of 37) CpG 486 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak2_65_60_-0.170726332738372_5.8453741711937_0.369634502458893-2 chr6 89344287 89344971 + 0.369634502458893 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 17984 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_72_54_0.123055722041267_5.84288757454529_0.36963450245888 chr16 5254794 5255918 + 0.36963450245888 NA intron (NM_027446, intron 1 of 7) intron (NM_027446, intron 1 of 7) 600 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding common_peak1_72_54_0.123055722041267_5.84288757454529_0.36963450245888-3 chr17 45744572 45745640 + 0.36963450245888 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 10600 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_72_54_0.123055722041267_5.84288757454529_0.36963450245888-2 chr16 18234545 18235565 + 0.36963450245888 NA promoter-TSS (NM_172151) promoter-TSS (NM_172151) 81 NM_172151 27801 Mm.326263 NM_172151 ENSMUSG00000060166 Zdhhc8 D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1 zinc finger, DHHC domain containing 8 protein-coding common_peak2_391_304_0.0595277721960734_8.28242931854829_0.369461593081874 chr15 36281757 36283860 + 0.369461593081874 NA intron (NM_001357631, intron 1 of 7) CpG 339 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_129_98_0.101728493982894_6.68022086707106_0.369172092162974 chr4 137387554 137389015 + 0.369172092162974 NA Intergenic CpG 21507 NM_001126318 242711 Mm.475541 NM_001126318 ENSMUSG00000078520 Cela3a Gm13011 chymotrypsin-like elastase family, member 3A protein-coding common_peak1_394_306_0.0610197605124885_8.29260472562642_0.369024257320619 chr15 74955162 74958091 + 0.369024257320619 NA intron (NM_008529, intron 1 of 3) intron (NM_008529, intron 1 of 3) 1520 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_201_155_0.0770407008219198_7.32392256927321_0.368899557457786 chr8 85298681 85300384 + 0.368899557457786 NA promoter-TSS (NM_022997) promoter-TSS (NM_022997) -35 NM_022997 65114 Mm.296520 NM_022997 ENSMUSG00000031696 Vps35 AI647796|Mem3 VPS35 retromer complex component protein-coding common_peak2_90_82_-0.154897186890926_6.29759083790146_0.368824536501612 chr17 36957793 36958882 + 0.368824536501612 NA promoter-TSS (NM_029602) promoter-TSS (NM_029602) 91 NM_023162 66136 Mm.486229 NM_023162 ENSMUSG00000036315 Znrd1 1110014N07Rik|Rpa12 zinc ribbon domain containing, 1 protein-coding common_peak1_91_82_-0.139241109123914_6.30541887678497_0.368824536501612-2 chr2 60880859 60881483 + 0.368824536501612 NA exon (NM_001141931, exon 1 of 14) exon (NM_001141931, exon 1 of 14) 267 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_99_75_0.107316369135479_6.30158569801132_0.368824536501612-2 chr19 46599165 46600250 + 0.368824536501612 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 601 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_91_82_-0.139241109123914_6.30541887678497_0.368824536501612 chr10 91123141 91123924 + 0.368824536501612 NA intron (NM_133668, intron 2 of 7) CpG 431 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak2_90_82_-0.154897186890926_6.29759083790146_0.368824536501612-2 chr6 134998397 134999736 + 0.368824536501612 NA Intergenic Intergenic -12546 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak2_91_82_-0.139241109123914_6.30541887678497_0.368824536501612 chr4 137387916 137388984 + 0.368824536501612 NA Intergenic CpG 21341 NM_001126318 242711 Mm.475541 NM_001126318 ENSMUSG00000078520 Cela3a Gm13011 chymotrypsin-like elastase family, member 3A protein-coding common_peak2_99_75_0.107316369135479_6.30158569801132_0.368824536501612 chr17 12916462 12917250 + 0.368824536501612 NA promoter-TSS (NM_026310) promoter-TSS (NM_026310) 527 NM_013686 21454 Mm.229342 NM_013686 ENSMUSG00000068039 Tcp1 AI528772|CCT|Cct1|Ccta|TRic|Tcp-1|Tp63|c-cpn|p63 t-complex protein 1 protein-coding common_peak1_90_82_-0.154897186890926_6.29759083790146_0.368824536501612 chr7 51269249 51270327 + 0.368824536501612 NA Intergenic Intergenic -241241 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak1_91_82_-0.139241109123914_6.30541887678497_0.368824536501612-3 chr9 44722678 44724392 + 0.368824536501612 NA intron (NM_153537, intron 4 of 21) intron (NM_153537, intron 4 of 21) 11663 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_291_225_0.0701265140042509_7.85524221941731_0.368719864944569 chr2 173274310 173276281 + 0.368719864944569 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 1238 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-11 chr17 46609968 46610167 + 0.368541233333383 NA intron (NM_175168, intron 1 of 19) intron (NM_175168, intron 1 of 19) 19437 NM_175168 71461 Mm.181833 NM_175168 ENSMUSG00000023972 Ptk7 8430404F20Rik|chz|mPTK7/CCK4 PTK7 protein tyrosine kinase 7 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383 chr11 51059620 51059898 + 0.368541233333383 NA intron (NM_009329, intron 1 of 4) intron (NM_009329, intron 1 of 4) 502 NM_001347495 21408 Mm.4792 NM_009329 ENSMUSG00000020364 Zfp354a AW488485|Tcf17|Znf354a|kid1 zinc finger protein 354A protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-13 chr3 15217920 15218192 + 0.368541233333383 NA Intergenic Intergenic 114246 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-8 chr2 28447229 28447550 + 0.368541233333383 NA promoter-TSS (NM_001005420) promoter-TSS (NM_001005420) -552 NM_001005420 241289 Mm.330095 NM_001005420 ENSMUSG00000035829 Ppp1r26 Gm347|Kiaa0649|mKIAA0649 protein phosphatase 1, regulatory subunit 26 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-3 chr10 121173789 121173995 + 0.368541233333383 NA Intergenic Intergenic 28757 NR_152796 74647 Mm.370609 NR_152796 ENSMUSG00000112846 4930432O09Rik - RIKEN cDNA 4930432O09 gene ncRNA common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-14 chr3 152143679 152143903 + 0.368541233333383 NA intron (NM_016867, intron 1 of 5) intron (NM_016867, intron 1 of 5) 22109 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383 chr1 134094627 134094862 + 0.368541233333383 NA Intergenic Intergenic -15589 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-14 chr3 96905476 96905718 + 0.368541233333383 NA promoter-TSS (NM_026229) promoter-TSS (NM_026229) -299 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-4 chr13 49320568 49320952 + 0.368541233333383 NA Intergenic Intergenic -11552 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-4 chr11 113268388 113268591 + 0.368541233333383 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -58820 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-7 chr12 108306369 108306652 + 0.368541233333383 NA exon (NM_001044380, exon 1 of 9) exon (NM_001044380, exon 1 of 9) 240 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-6 chr12 86948130 86948365 + 0.368541233333383 NA intron (NM_173735, intron 1 of 3) intron (NM_173735, intron 1 of 3) 904 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-10 chr16 29945464 29945733 + 0.368541233333383 NA Intergenic Intergenic 33526 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-19 chr7 46918641 46918869 + 0.368541233333383 NA intron (NM_021884, intron 1 of 9) intron (NM_021884, intron 1 of 9) 1214 NM_001348089 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding unique_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-3 chr8 94787973 94788207 + 0.368541233333383 NA Intergenic MLTR11A|LTR|ERVK 15910 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-9 chr19 59591121 59591372 + 0.368541233333383 NA Intergenic Intergenic 98110 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383 chr10 117793112 117793323 + 0.368541233333383 NA promoter-TSS (NM_134010) promoter-TSS (NM_134010) -512 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-10 chr5 41844139 41844359 + 0.368541233333383 NA promoter-TSS (NM_001310601) promoter-TSS (NM_001310601) 66 NM_001310601 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-2 chr10 127621855 127622099 + 0.368541233333383 NA promoter-TSS (NM_008512) promoter-TSS (NM_008512) -829 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-7 chr19 18632048 18632296 + 0.368541233333383 NA promoter-TSS (NM_017375) promoter-TSS (NM_017375) 156 NM_145497 225994 Mm.211595 NM_145497 ENSMUSG00000037847 Nmrk1 AA408380|D630020N23Rik|Nrk1 nicotinamide riboside kinase 1 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-15 chr7 112714631 112714871 + 0.368541233333383 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 35431 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-5 chr11 97884327 97884655 + 0.368541233333383 NA promoter-TSS (NM_001081435) promoter-TSS (NM_001081435) -337 NM_001081435 72973 Mm.245939 NM_001081435 ENSMUSG00000070336 Fbxo47 2900052P03Rik|Gm1562 F-box protein 47 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-16 chr5 32134043 32134397 + 0.368541233333383 NA Intergenic Intergenic -2252 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-17 chr8 6813117 6813353 + 0.368541233333383 NA Intergenic Intergenic -1707948 NM_011388 20494 Mm.3500 NM_011388 ENSMUSG00000023073 Slc10a2 9130221J18Rik|AI605518|ASBT|IBAT|ISBT solute carrier family 10, member 2 protein-coding unique_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-4 chr4 154023966 154024262 + 0.368541233333383 NA intron (NM_001163721, intron 2 of 3) intron (NM_001163721, intron 2 of 3) 1930 NM_001163722 68859 Mm.477488 NM_001033144 ENSMUSG00000078350 Smim1 0610011H04Rik|1190007F08Rik|2700009I11Rik small integral membrane protein 1 protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-3 chr11 16769920 16770273 + 0.368541233333383 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 17893 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-20 chr7 110843626 110843932 + 0.368541233333383 NA intron (NM_025999, intron 1 of 5) intron (NM_025999, intron 1 of 5) 602 NM_025999 67150 Mm.96867 NM_025999 ENSMUSG00000030788 Rnf141 2610110L04Rik|AA792898|AU022812|ZFP36|ZNF230 ring finger protein 141 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-17 chr9 86454343 86454736 + 0.368541233333383 NA intron (NM_027394, intron 1 of 9) intron (NM_027394, intron 1 of 9) 10377 NM_027394 70348 Mm.53469 NM_027394 ENSMUSG00000032415 Ube2cbp 2610018I03Rik|Ube3d ubiquitin-conjugating enzyme E2C binding protein protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383 chr1 71887441 71887930 + 0.368541233333383 NA promoter-TSS (NR_027658) promoter-TSS (NR_027658) -427 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-6 chr13 32496710 32496966 + 0.368541233333383 NA Intergenic Intergenic -158294 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-11 chr2 158231548 158231776 + 0.368541233333383 NA Intergenic Intergenic -2438 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-15 chr8 110750543 110750932 + 0.368541233333383 NA intron (NM_029646, intron 2 of 7) B1_Mur1|SINE|Alu 25011 NM_001310591 244654 Mm.490385 NM_198625 ENSMUSG00000033763 Mtss1l ABBA metastasis suppressor 1-like protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-6 chr15 75678056 75678299 + 0.368541233333383 NA intron (NM_028404, intron 1 of 13) intron (NM_028404, intron 1 of 13) 623 NM_001355589 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-22 chr9 83971394 83971741 + 0.368541233333383 NA intron (NM_199195, intron 3 of 10) intron (NM_199195, intron 3 of 10) 22786 NM_199195 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-9 chr16 57366171 57366364 + 0.368541233333383 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 12990 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-4 chr11 4218302 4218626 + 0.368541233333383 NA intron (NM_028022, intron 1 of 8) CpG 213 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik|Castor1 GATS protein-like 3 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-6 chr16 45037943 45038271 + 0.368541233333383 NA Intergenic Intergenic -55904 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-3 chr10 80157477 80157857 + 0.368541233333383 NA 3' UTR (NM_021565, exon 9 of 9) 3' UTR (NM_021565, exon 9 of 9) 7985 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-18 chrX 42148677 42148920 + 0.368541233333383 NA promoter-TSS (NM_001077712) promoter-TSS (NM_001077712) -614 NM_001077712 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding unique_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383 chr15 77877313 77877558 + 0.368541233333383 NA Intergenic Intergenic -35260 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-8 chr16 86816008 86816315 + 0.368541233333383 NA Intergenic Intergenic -9648 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-16 chr7 125706068 125706504 + 0.368541233333383 NA intron (NM_207239, intron 1 of 36) intron (NM_207239, intron 1 of 36) 1402 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-9 chr2 33220376 33220626 + 0.368541233333383 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 4540 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-22 chr7 80790451 80790718 + 0.368541233333383 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 12747 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-16 chr5 122284487 122284752 + 0.368541233333383 NA 5' UTR (NM_177242, exon 1 of 6) 5' UTR (NM_177242, exon 1 of 6) 221 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-2 chr13 21753532 21753804 + 0.368541233333383 NA promoter-TSS (NM_178201) promoter-TSS (NM_178201) 244 NM_178183 319169 Mm.370338 NM_178183 ENSMUSG00000063021 Hist1h2ak - histone cluster 1, H2ak protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-19 chr8 36644776 36645213 + 0.368541233333383 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -31051 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-2 chr1 91085293 91085630 + 0.368541233333383 NA intron (NM_008515, intron 7 of 22) intron (NM_008515, intron 7 of 22) 32017 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-3 chr13 32517031 32517443 + 0.368541233333383 NA Intergenic Intergenic -178693 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-7 chr16 13387692 13388143 + 0.368541233333383 NA intron (NM_153588, intron 6 of 14) MTEa|LTR|ERVL-MaLR 29496 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-15 chr4 63403777 63404061 + 0.368541233333383 NA promoter-TSS (NM_001045514) promoter-TSS (NM_001045514) -474 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding unique_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383 chr14 20152524 20152888 + 0.368541233333383 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 29076 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-17 chr9 49879635 49879984 + 0.368541233333383 NA Intergenic Intergenic -80416 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-5 chr12 85051608 85051912 + 0.368541233333383 NA intron (NM_001347421, intron 15 of 19) intron (NM_001347421, intron 15 of 19) 43855 NM_001361239 73422 Mm.311944 NM_175198 ENSMUSG00000042320 Prox2 1700058C01Rik prospero homeobox 2 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-8 chr15 7859023 7859279 + 0.368541233333383 NA Intergenic Intergenic 43601 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-10 chr19 11611726 11612051 + 0.368541233333383 NA Intergenic Intergenic -7084 NM_026835 68774 Mm.290390 NM_026835 ENSMUSG00000024679 Ms4a6d 1110058E16Rik|AI447446|Ms4a11 membrane-spanning 4-domains, subfamily A, member 6D protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-9 chr15 77922815 77923043 + 0.368541233333383 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 6065 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-5 chr10 77147685 77147873 + 0.368541233333383 NA intron (NM_009929, intron 2 of 41) RLTR12E|LTR|ERVK 18751 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-10 chr5 105495668 105495900 + 0.368541233333383 NA Intergenic Intergenic -23687 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-13 chr5 136569819 136570131 + 0.368541233333383 NA Intergenic RSINE1|SINE|B4 -2485 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383 chr1 54129302 54129533 + 0.368541233333383 NA intron (NM_001001883, intron 1 of 28) intron (NM_001001883, intron 1 of 28) 65617 NM_001001883 329152 Mm.132150 NM_172655 ENSMUSG00000042807 Hecw2 A730039N16Rik|D030049F17Rik|Gm971|Nedl2|mKIAA1301 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-10 chr15 81523186 81523485 + 0.368541233333383 NA Intergenic CpG 57019 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-2 chr10 69917212 69917455 + 0.368541233333383 NA intron (NM_170689, intron 23 of 41) intron (NM_170689, intron 23 of 41) -8199 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-3 chr10 91082344 91082574 + 0.368541233333383 NA promoter-TSS (NM_027078) promoter-TSS (NM_027078) 284 NM_001042558 11783 Mm.220289 NM_009684 ENSMUSG00000019979 Apaf1 6230400I06Rik|Apaf-1|Apaf1l|fog|mKIAA0413 apoptotic peptidase activating factor 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-18 chr6 48841683 48841912 + 0.368541233333383 NA promoter-TSS (NM_001164209) promoter-TSS (NM_001164209) 141 NM_001098271 66058 Mm.27061 NM_025326 ENSMUSG00000023367 Tmem176a 0610011I04Rik|AU040201|AU041743|Keg2 transmembrane protein 176A protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-11 chr2 135679721 135679987 + 0.368541233333383 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) 20307 NM_001355156 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-20 chr8 46010805 46011174 + 0.368541233333383 NA intron (NM_026278, intron 1 of 8) intron (NM_026278, intron 1 of 8) 387 NM_026278 67620 Mm.383914 NM_026278 ENSMUSG00000031637 Lrp2bp 1700113N17Rik|2310006J04Rik|4930479L12Rik|MegBP Lrp2 binding protein protein-coding unique_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-2 chr5 24451424 24451700 + 0.368541233333383 NA promoter-TSS (NM_139153) promoter-TSS (NM_139153) -615 NM_001359881 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-9 chr3 37977644 37977966 + 0.368541233333383 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 78992 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-12 chr5 149584731 149585029 + 0.368541233333383 NA intron (NM_029440, intron 14 of 22) intron (NM_029440, intron 14 of 22) -46850 NR_045423 100415916 Mm.145528 NR_045423 ENSMUSG00000107132 Gm15997 - predicted gene 15997 ncRNA common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-4 chr11 103145372 103145630 + 0.368541233333383 NA Intergenic Intergenic 12142 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-20 chr6 98958708 98958983 + 0.368541233333383 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 69453 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-15 chr8 108766141 108766424 + 0.368541233333383 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 51638 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-16 chr7 139268778 139269155 + 0.368541233333383 NA Intergenic Intergenic 20484 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-4 chr10 77134629 77134860 + 0.368541233333383 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -21039 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-17 chr5 89470465 89470697 + 0.368541233333383 NA Intergenic Intergenic -12683 NM_008096 14473 Mm.196595 NM_008096 ENSMUSG00000035540 Gc DBP|VDB vitamin D binding protein protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-10 chr3 107757079 107757374 + 0.368541233333383 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 3243 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-5 chr9 99098304 99098652 + 0.368541233333383 NA intron (NM_029094, intron 4 of 23) intron (NM_029094, intron 4 of 23) 41733 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-12 chr7 130640511 130640804 + 0.368541233333383 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -51899 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-18 chr5 140791204 140791445 + 0.368541233333383 NA intron (NM_010302, intron 1 of 3) intron (NM_010302, intron 1 of 3) 39107 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-2 chr10 77380697 77380992 + 0.368541233333383 NA intron (NM_001024838, intron 1 of 11) intron (NM_001024838, intron 1 of 11) 37429 NM_130895 110532 Mm.276815 NM_130895 ENSMUSG00000020262 Adarb1 1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1 adenosine deaminase, RNA-specific, B1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-16 chr8 119792200 119792424 + 0.368541233333383 NA Intergenic Intergenic -13896 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-12 chr2 168456542 168456842 + 0.368541233333383 NA Intergenic Intergenic 133673 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-18 chr8 25011393 25011712 + 0.368541233333383 NA intron (NM_001270996, intron 1 of 21) intron (NM_001270996, intron 1 of 21) 5370 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-12 chr2 72304417 72304621 + 0.368541233333383 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 18818 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-2 chr1 153752127 153752332 + 0.368541233333383 NA intron (NM_011882, intron 2 of 8) intron (NM_011882, intron 2 of 8) 2803 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-11 chr5 90880886 90881155 + 0.368541233333383 NA Intergenic Intergenic -10225 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-13 chr8 33895005 33895252 + 0.368541233333383 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 34735 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-15 chr3 107756231 107756453 + 0.368541233333383 NA intron (NM_007778, intron 2 of 8) intron (NM_007778, intron 2 of 8) 4127 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-6 chr12 40036981 40037308 + 0.368541233333383 NA intron (NM_001039515, intron 1 of 1) intron (NM_001039515, intron 1 of 1) 232 NM_007487 11861 Mm.12723 NM_007487 ENSMUSG00000047446 Arl4a AI467555|Arl4 ADP-ribosylation factor-like 4A protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-14 chr6 145795833 145796175 + 0.368541233333383 NA Intergenic Intergenic -12379 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-3 chr10 56485784 56486148 + 0.368541233333383 NA Intergenic B1_Mur1|SINE|Alu 53985 NR_152768 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-7 chr13 55486839 55487064 + 0.368541233333383 NA intron (NM_001177371, intron 1 of 14) intron (NM_001177371, intron 1 of 14) 1125 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-9 chr15 102205567 102205874 + 0.368541233333383 NA promoter-TSS (NM_001359126) promoter-TSS (NM_001359126) -668 NM_001359128 246277 Mm.296382 NM_144942 ENSMUSG00000023044 Csad Csd cysteine sulfinic acid decarboxylase protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-23 chr8 11374747 11374975 + 0.368541233333383 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -62035 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-5 chr15 84855731 84855981 + 0.368541233333383 NA promoter-TSS (NM_001356573) promoter-TSS (NM_001356573) 273 NM_001081166 271305 Mm.101022 NM_001081166 ENSMUSG00000016624 Phf21b A730032D07Rik PHD finger protein 21B protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-14 chr8 47598551 47598775 + 0.368541233333383 NA Intergenic Intergenic 65018 NM_203507 192174 Mm.273081 NM_203507 ENSMUSG00000031568 Rwdd4a BC016198|Gm1942|Rwdd4 RWD domain containing 4A protein-coding unique_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-4 chr9 71667899 71668150 + 0.368541233333383 NA intron (NM_001304362, intron 8 of 18) intron (NM_001304362, intron 8 of 18) -75664 NM_001033208 102371 Mm.27585 NM_001033208 ENSMUSG00000041361 Myzap AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap myocardial zonula adherens protein protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-16 chr8 123858968 123859208 + 0.368541233333383 NA intron (NM_028536, intron 2 of 3) CpG 1121 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-5 chr12 78860653 78860874 + 0.368541233333383 NA intron (NM_023721, intron 1 of 8) intron (NM_023721, intron 1 of 8) 875 NM_023721 73834 Mm.311549 NM_023721 ENSMUSG00000021114 Atp6v1d 1110004P10Rik|Atp6m|VATD|Vma8 ATPase, H+ transporting, lysosomal V1 subunit D protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-13 chr3 30261383 30261623 + 0.368541233333383 NA intron (NM_001361034, intron 1 of 16) intron (NM_001361034, intron 1 of 16) 248172 NM_001361034 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-13 chr3 107742708 107742916 + 0.368541233333383 NA 3' UTR (NM_001113529, exon 9 of 9) 3' UTR (NM_001113529, exon 9 of 9) 17657 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-23 chr9 104002105 104002385 + 0.368541233333383 NA promoter-TSS (NM_172460) promoter-TSS (NM_172460) -299 NM_028721 74025 Mm.479273 NM_028721 ENSMUSG00000032558 Nphp3 3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy nephronophthisis 3 (adolescent) protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-12 chr5 136472302 136472767 + 0.368541233333383 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 93447 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-8 chr14 76781528 76781746 + 0.368541233333383 NA Intergenic Intergenic 21506 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-6 chr11 104623938 104624224 + 0.368541233333383 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 16081 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-8 chr15 81249125 81249441 + 0.368541233333383 NA intron (NR_077230, intron 1 of 1) intron (NR_077230, intron 1 of 1) -1312 NR_077231 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA unique_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-3 chr2 32897861 32898206 + 0.368541233333383 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 21899 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-13 chr6 67482040 67482273 + 0.368541233333383 NA intron (NM_144548, intron 3 of 10) intron (NM_144548, intron 3 of 10) 9699 NM_144548 209590 Mm.221227 NM_144548 ENSMUSG00000049093 Il23r IL-23R interleukin 23 receptor protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-8 chr18 25558754 25559041 + 0.368541233333383 NA intron (NM_001362322, intron 2 of 12) intron (NM_001362322, intron 2 of 12) 120851 NM_001362337 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-12 chr3 30261390 30261619 + 0.368541233333383 NA intron (NM_001361034, intron 1 of 16) intron (NM_001361034, intron 1 of 16) 248171 NM_001361034 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-14 chr5 33344340 33344552 + 0.368541233333383 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 8874 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-7 chr15 62392627 62392848 + 0.368541233333383 NA Intergenic Intergenic -173286 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-4 chr11 31565993 31566262 + 0.368541233333383 NA Intergenic Intergenic 105735 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-14 chr8 33899164 33899492 + 0.368541233333383 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 30535 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-17 chrX 95444502 95444779 + 0.368541233333383 NA intron (NM_175179, intron 1 of 1) intron (NM_175179, intron 1 of 1) 200 NM_175179 72345 Mm.182867 NM_175179 ENSMUSG00000050332 Amer1 2810002O09Rik|AW492303|Fam123b|Wtx APC membrane recruitment 1 protein-coding unique_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-2 chr14 45476152 45476411 + 0.368541233333383 NA intron (NM_146054, intron 4 of 14) intron (NM_146054, intron 4 of 14) 53784 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-21 chr6 146934861 146935085 + 0.368541233333383 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 19448 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-21 chr8 47948079 47948328 + 0.368541233333383 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 42348 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-11 chr4 117019547 117019819 + 0.368541233333383 NA intron (NM_001111277, intron 1 of 11) intron (NM_001111277, intron 1 of 11) 281 NM_001111277 108067 Mm.34612 NM_175135 ENSMUSG00000028683 Eif2b3 1190002P15Rik eukaryotic translation initiation factor 2B, subunit 3 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-15 chr6 54961506 54961764 + 0.368541233333383 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 10026 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding unique_peak1_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-6 chr9 103010020 103010429 + 0.368541233333383 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 1735 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-11 chr7 80781933 80782381 + 0.368541233333383 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 21174 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-7 chr17 21535600 21535804 + 0.368541233333383 NA 5' UTR (NM_144515, exon 1 of 5) 5' UTR (NM_144515, exon 1 of 5) 163 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak2_15_16_-0.357422797032543_3.90875144273407_0.368541233333383-5 chr11 97191689 97191991 + 0.368541233333383 NA Intergenic B3|SINE|B2 -3948 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding unique_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383 chr1 93343790 93344087 + 0.368541233333383 NA intron (NM_023200, intron 1 of 9) CpG 293 NM_023200 66385 Mm.88704 NM_023200 ENSMUSG00000026275 Ppp1r7 2310014J01Rik|SDS22 protein phosphatase 1, regulatory (inhibitor) subunit 7 protein-coding common_peak1_18_13_0.168863512060788_3.891786678088_0.368541233333383-19 chr6 72551710 72551913 + 0.368541233333383 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 2164 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_18_13_0.168863512060788_3.891786678088_0.368541233333383-17 chr5 123508501 123508722 + 0.368541233333383 NA TTS (NM_001289822) TTS (NM_001289822) -1849 NM_198611 231727 Mm.484068 NM_198611 ENSMUSG00000029431 B3gnt4 1010001G17Rik|BGnT-4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 protein-coding common_peak2_191_166_-0.0939935847485343_7.33670750009978_0.368477871353519 chr9 78480121 78481580 + 0.368477871353519 NA intron (NM_010106, intron 1 of 7) intron (NM_010106, intron 1 of 7) 874 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_66_61_-0.172643292746487_5.86787466401363_0.368450600203475-3 chr6 88924053 88924689 + 0.368450600203475 NA Intergenic Intergenic 22120 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_66_61_-0.172643292746487_5.86787466401363_0.368450600203475 chr13 32556741 32557908 + 0.368450600203475 NA Intergenic Intergenic -218780 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_66_61_-0.172643292746487_5.86787466401363_0.368450600203475-2 chr13 110907989 110908666 + 0.368450600203475 NA TTS (NR_131193) TTS (NR_131193) -4481 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_73_55_0.116550839426594_5.8656303417709_0.368450600203463 chr15 44427102 44427783 + 0.368450600203463 NA promoter-TSS (NM_175009) promoter-TSS (NM_175009) -669 NM_175009 223527 Mm.291828 NM_175009 ENSMUSG00000022338 Eny2 1810057B09Rik|6720481I12|DC6|Ey2 ENY2 transcription and export complex 2 subunit protein-coding common_peak2_73_55_0.116550839426594_5.8656303417709_0.368450600203463-2 chr4 145194253 145195022 + 0.368450600203463 NA intron (NM_001276465, intron 1 of 69) CpG 368 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak2_73_55_0.116550839426594_5.8656303417709_0.368450600203463-3 chr9 96773480 96774186 + 0.368450600203463 NA non-coding (NR_102293, exon 5 of 5) non-coding (NR_102293, exon 5 of 5) 8271 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_73_55_0.116550839426594_5.8656303417709_0.368450600203463-2 chr15 76081122 76081492 + 0.368450600203463 NA promoter-TSS (NM_133691) promoter-TSS (NM_133691) -361 NM_028364 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding common_peak1_73_55_0.116550839426594_5.8656303417709_0.368450600203463 chr10 27983506 27984166 + 0.368450600203463 NA Intergenic Intergenic -90984 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_164_126_0.0839282372329846_7.03064880538866_0.368433880310474 chr8 88284424 88286066 + 0.368433880310474 NA intron (NM_001109756, intron 1 of 27) intron (NM_001109756, intron 1 of 27) 2253 NM_001109756 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_457_356_0.0553230844098511_8.50744180623402_0.36823989438333 chr15 97830415 97833385 + 0.36823989438333 NA promoter-TSS (NM_001204276) promoter-TSS (NM_001204276) -133 NM_001204276 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_233_201_-0.0851120629882596_7.61565545125766_0.368237881052311 chr15 41723590 41726455 + 0.368237881052311 NA intron (NR_152565, intron 3 of 17) B3A|SINE|B2 -63973 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_293_227_0.0671937722822786_7.86648690030588_0.368138706983052 chr15 13171297 13173602 + 0.368138706983052 NA intron (NM_007666, intron 1 of 11) intron (NM_007666, intron 1 of 11) 1226 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-3 chr12 104896235 104896631 + 0.368093376636814 NA Intergenic Intergenic -31357 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-7 chr5 125045755 125046316 + 0.368093376636814 NA intron (NM_011424, intron 21 of 46) intron (NM_011424, intron 21 of 46) 42560 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_45_43_-0.216578316841042_5.35114246021678_0.368093376636814 chr16 34573404 34574151 + 0.368093376636814 NA Intergenic CpG -59750 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak1_51_38_0.13308097601962_5.35194270687206_0.368093376636814-5 chr4 134734493 134735102 + 0.368093376636814 NA Intergenic Intergenic -30507 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-2 chr5 111248286 111248621 + 0.368093376636814 NA intron (NM_001267622, intron 12 of 22) intron (NM_001267622, intron 12 of 22) -82244 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-3 chr19 9983975 9984536 + 0.368093376636814 NA TTS (NM_011913) TTS (NM_011913) 1609 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-2 chr17 32363680 32364238 + 0.368093376636814 NA intron (NR_033525, intron 4 of 10) intron (NR_033525, intron 4 of 10) -13382 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-4 chr2 117866866 117867440 + 0.368093376636814 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 45225 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814 chr10 81429897 81430763 + 0.368093376636814 NA Intergenic CpG -3157 NM_026756 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding common_peak1_51_38_0.13308097601962_5.35194270687206_0.368093376636814-4 chr4 89137551 89138155 + 0.368093376636814 NA intron (NM_024433, intron 1 of 7) CpG 483 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-7 chr9 43262184 43263012 + 0.368093376636814 NA intron (NM_001243261, intron 1 of 2) G-rich|Low_complexity|Low_complexity 2719 NM_001243261 235302 Mm.135745 NM_001243261 D630033O11Rik Gm588 RIKEN cDNA D630033O11 gene protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-2 chr11 75409978 75410667 + 0.368093376636814 NA exon (NM_011340, exon 8 of 8) exon (NM_011340, exon 8 of 8) 12301 NM_011340 20317 Mm.2044 NM_011340 ENSMUSG00000000753 Serpinf1 AI195227|EPC-1|Pedf|Pedfl|Sdf3 serine (or cysteine) peptidase inhibitor, clade F, member 1 protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-8 chrX 162760522 162760934 + 0.368093376636814 NA intron (NM_009031, intron 1 of 11) CpG 356 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7, chromatin remodeling factor protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-5 chr2 132211924 132212750 + 0.368093376636814 NA Intergenic Intergenic 35451 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-8 chr7 143014138 143014713 + 0.368093376636814 NA intron (NM_001128082, intron 3 of 5) intron (NM_001128082, intron 3 of 5) 8766 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak1_51_38_0.13308097601962_5.35194270687206_0.368093376636814-2 chr15 74967688 74968214 + 0.368093376636814 NA Intergenic Intergenic 12845 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_51_38_0.13308097601962_5.35194270687206_0.368093376636814-6 chr8 31841221 31842298 + 0.368093376636814 NA intron (NM_178591, intron 2 of 8) intron (NM_178591, intron 2 of 8) 76444 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_45_43_-0.216578316841042_5.35114246021678_0.368093376636814-6 chr7 28378320 28378997 + 0.368093376636814 NA intron (NM_011756, intron 1 of 1) intron (NM_011756, intron 1 of 1) 570 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-5 chr17 26610706 26611195 + 0.368093376636814 NA intron (NM_026170, intron 2 of 9) intron (NM_026170, intron 2 of 9) 49438 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_51_38_0.13308097601962_5.35194270687206_0.368093376636814-3 chr3 121892490 121893318 + 0.368093376636814 NA Intergenic Intergenic -60325 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-4 chr16 18426013 18426610 + 0.368093376636814 NA promoter-TSS (NM_013711) promoter-TSS (NM_013711) -106 NM_001353143 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814-6 chr19 6118165 6118522 + 0.368093376636814 NA exon (NM_133678, exon 1 of 2) exon (NM_133678, exon 1 of 2) 243 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding common_peak2_51_38_0.13308097601962_5.35194270687206_0.368093376636814 chr10 80265098 80265437 + 0.368093376636814 NA intron (NM_133188, intron 1 of 11) CpG 276 NM_133188 70248 Mm.148693 NM_133188 ENSMUSG00000069565 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 protein-coding common_peak1_51_38_0.13308097601962_5.35194270687206_0.368093376636814 chr13 75825144 75825737 + 0.368093376636814 NA Intergenic Intergenic -14445 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_92_83_-0.141032280998524_6.3218012822795_0.367971219839485 chr13 49296037 49297347 + 0.367971219839485 NA exon (NM_015759, exon 3 of 18) exon (NM_015759, exon 3 of 18) 12516 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_101_76_0.116824939295761_6.32519901034278_0.367971219839485-2 chr17 12916401 12917253 + 0.367971219839485 NA promoter-TSS (NM_026310) promoter-TSS (NM_026310) 498 NM_013686 21454 Mm.229342 NM_013686 ENSMUSG00000068039 Tcp1 AI528772|CCT|Cct1|Ccta|TRic|Tcp-1|Tp63|c-cpn|p63 t-complex protein 1 protein-coding common_peak1_92_83_-0.141032280998524_6.3218012822795_0.367971219839485-2 chr7 73558849 73559623 + 0.367971219839485 NA promoter-TSS (NR_037569) promoter-TSS (NR_037569) -841 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_100_76_0.102711358562512_6.31814221997616_0.367971219839485 chr5 35893462 35894334 + 0.367971219839485 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 579 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding common_peak1_101_76_0.116824939295761_6.32519901034278_0.367971219839485 chr10 81320906 81321984 + 0.367971219839485 NA exon (NM_027381, exon 1 of 9) exon (NM_027381, exon 1 of 9) 342 NM_027381 70312 Mm.87628 NM_027381 ENSMUSG00000034889 Cactin 2510012J08Rik cactin, spliceosome C complex subunit protein-coding common_peak2_92_83_-0.141032280998524_6.3218012822795_0.367971219839485-3 chr7 73558838 73559622 + 0.367971219839485 NA promoter-TSS (NR_037569) promoter-TSS (NR_037569) -835 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_92_83_-0.141032280998524_6.3218012822795_0.367971219839485 chr12 69158371 69159107 + 0.367971219839485 NA exon (NM_009093, exon 2 of 3) exon (NM_009093, exon 2 of 3) 447 NM_009093 20090 Mm.379006 NM_009093 ENSMUSG00000034892 Rps29 - ribosomal protein S29 protein-coding common_peak1_100_76_0.102711358562512_6.31814221997616_0.367971219839485-2 chr15 83122369 83122766 + 0.367971219839485 NA intron (NM_001358061, intron 1 of 3) CpG 234 NM_001358061 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding common_peak2_92_83_-0.141032280998524_6.3218012822795_0.367971219839485-4 chr8 10921528 10922283 + 0.367971219839485 NA Intergenic Intergenic 6552 NR_030715 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA common_peak1_100_76_0.102711358562512_6.31814221997616_0.367971219839485-3 chr2 27425579 27427005 + 0.367971219839485 NA exon (NM_009500, exon 1 of 28) exon (NM_009500, exon 1 of 28) 1316 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding common_peak1_100_76_0.102711358562512_6.31814221997616_0.367971219839485 chr1 128244218 128245222 + 0.367971219839485 NA intron (NM_001356529, intron 1 of 12) CpG 583 NM_001356529 67812 Mm.293321 NM_026390 ENSMUSG00000026353 Ubxn4 1300013G12Rik|Ubxd2|mKIAA0242 UBX domain protein 4 protein-coding common_peak1_101_76_0.116824939295761_6.32519901034278_0.367971219839485-3 chr2 148877147 148878696 + 0.367971219839485 NA Intergenic Intergenic -2409 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_100_76_0.102711358562512_6.31814221997616_0.367971219839485-4 chr2 163357826 163358814 + 0.367971219839485 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 39653 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_92_83_-0.141032280998524_6.3218012822795_0.367971219839485-2 chr4 122885143 122885903 + 0.367971219839485 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 553 NM_001358035 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_154_136_-0.11498062422711_7.04054177084697_0.367921102240715 chr5 77367181 77368818 + 0.367921102240715 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 40046 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-5 chr4 136569591 136570068 + 0.367910579842133 NA intron (NM_001356567, intron 7 of 19) intron (NM_001356567, intron 7 of 19) 32894 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-4 chr3 95227957 95228197 + 0.367910579842133 NA promoter-TSS (NM_172395) promoter-TSS (NM_172395) -347 NM_172395 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak2_33_24_0.165974667561727_4.72684352355559_0.367910579842133-2 chr18 52650401 52650903 + 0.367910579842133 NA intron (NM_030097, intron 1 of 3) intron (NM_030097, intron 1 of 3) 4432 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding unique_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133 chr4 129010941 129011521 + 0.367910579842133 NA non-coding (NR_138540, exon 7 of 7) non-coding (NR_138540, exon 7 of 7) 18007 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-2 chr15 66867110 66867485 + 0.367910579842133 NA Intergenic Intergenic -24096 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-7 chr6 114874604 114874946 + 0.367910579842133 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 47046 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_33_24_0.165974667561727_4.72684352355559_0.367910579842133-4 chr8 84989952 84990248 + 0.367910579842133 NA promoter-TSS (NM_001167991) promoter-TSS (NM_001167991) -495 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133 chr12 85473604 85473875 + 0.367910579842133 NA promoter-TSS (NM_010234) promoter-TSS (NM_010234) -151 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-6 chr5 117159411 117160049 + 0.367910579842133 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 26142 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak2_33_24_0.165974667561727_4.72684352355559_0.367910579842133-3 chr7 25280080 25280433 + 0.367910579842133 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) -1923 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_33_24_0.165974667561727_4.72684352355559_0.367910579842133-5 chr9 50746120 50746488 + 0.367910579842133 NA intron (NM_025865, intron 1 of 3) intron (NM_025865, intron 1 of 3) 217 NM_025865 66952 Mm.273375 NM_025865 ENSMUSG00000032062 2310030G06Rik 2610024D04Rik|AV017521 RIKEN cDNA 2310030G06 gene protein-coding common_peak2_33_24_0.165974667561727_4.72684352355559_0.367910579842133 chr1 157518524 157518893 + 0.367910579842133 NA intron (NM_033354, intron 2 of 27) intron (NM_033354, intron 2 of 27) -6985 NR_151610 102632813 Mm.420137 NR_151610 Gm15486 - predicted gene 15486 ncRNA common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-3 chr17 25920274 25920539 + 0.367910579842133 NA promoter-TSS (NM_139154) promoter-TSS (NM_139154) -692 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-9 chr9 67108080 67108621 + 0.367910579842133 NA non-coding (NR_153957, exon 3 of 3) non-coding (NR_153957, exon 3 of 3) 6050 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak1_33_24_0.165974667561727_4.72684352355559_0.367910579842133-8 chr7 130959613 130960129 + 0.367910579842133 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 23668 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-6 chr7 27231973 27232355 + 0.367910579842127 NA promoter-TSS (NM_133770) promoter-TSS (NM_133770) -849 NM_133770 76889 Mm.124728 NM_133770 ENSMUSG00000003762 Coq8b 0610012P18Rik|Adck4 coenzyme Q8B protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-9 chr13 67108081 67108585 + 0.367910579842127 NA intron (NM_001256052, intron 2 of 6) intron (NM_001256052, intron 2 of 6) 5695 NM_001256052 432770 Mm.124021 NM_001256052 ENSMUSG00000074824 Rslcan18 mszf51 regulator of sex-limitation candidate 18 protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-7 chr8 105270004 105270244 + 0.367910579842127 NA TTS (NM_015821) TTS (NM_015821) 323 NM_001256044 26386 Mm.89204 NM_011939 ENSMUSG00000033249 Hsf4 HSF 4|HSTF 4|HSTF4|ldis1|mHSF4 heat shock transcription factor 4 protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-2 chr11 80080533 80080899 + 0.367910579842127 NA intron (NM_018776, intron 1 of 7) GC_rich|Low_complexity|Low_complexity 275 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-6 chr11 51584855 51585154 + 0.367910579842127 NA intron (NM_028398, intron 1 of 12) CpG 247 NM_028398 72947 Mm.256875 NM_028398 ENSMUSG00000020359 Phykpl 2900006B13Rik|Agxt2l2 5-phosphohydroxy-L-lysine phospholyase protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127 chr1 135794905 135795345 + 0.367910579842127 NA Intergenic Intergenic -4296 NM_021467 21952 Mm.44379 NM_021467 ENSMUSG00000026418 Tnni1 2700018B22Rik|AI747285|ssTnI troponin I, skeletal, slow 1 protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-3 chr5 30869694 30869963 + 0.367910579842127 NA intron (NM_144525, intron 1 of 16) CpG 249 NM_144525 68796 Mm.205169 NM_144525 ENSMUSG00000038828 Tmem214 1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280 transmembrane protein 214 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-10 chr19 29470302 29470592 + 0.367910579842127 NA intron (NM_021396, intron 5 of 5) intron (NM_021396, intron 5 of 5) 51540 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-5 chr6 127150372 127150835 + 0.367910579842127 NA exon (NM_009829, exon 1 of 5) exon (NM_009829, exon 1 of 5) 445 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-7 chr11 101425120 101425343 + 0.367910579842127 NA promoter-TSS (NM_026865) promoter-TSS (NM_026865) 97 NM_001357574 73635 Mm.472804 NM_026865 ENSMUSG00000097487 Ptges3l 1110069E20Rik|1700113I22Rik prostaglandin E synthase 3 like protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-12 chr4 126133386 126133887 + 0.367910579842127 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -14367 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-4 chr5 66586714 66587299 + 0.367910579842127 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 31811 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-2 chr10 62329954 62330390 + 0.367910579842127 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 10249 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-13 chr6 22355629 22356056 + 0.367910579842127 NA intron (NM_138587, intron 1 of 9) CpG 239 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-11 chr3 36151965 36152588 + 0.367910579842127 NA intron (NM_001101478, intron 1 of 3) intron (NM_001101478, intron 1 of 3) 1196 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-3 chr10 108433700 108434141 + 0.367910579842127 NA Intergenic Intergenic 101731 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-15 chr8 126593792 126594018 + 0.367910579842127 NA promoter-TSS (NM_001164598) promoter-TSS (NM_001164598) -469 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-14 chr7 3693774 3694198 + 0.367910579842127 NA promoter-TSS (NM_029934) promoter-TSS (NM_029934) 376 NM_001164205 66078 Mm.379100 NM_024168 ENSMUSG00000035585 Tsen34 0610027F08Rik|Leng5 tRNA splicing endonuclease subunit 34 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-4 chr11 33861172 33861721 + 0.367910579842127 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -17861 NM_001290690 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127 chr3 131084876 131085362 + 0.367910579842127 NA Intergenic Intergenic -25178 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-16 chr8 128689846 128690209 + 0.367910579842127 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 4373 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127 chr1 184141404 184141695 + 0.367910579842127 NA Intergenic Intergenic 107168 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-5 chr11 35951013 35951478 + 0.367910579842127 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 28844 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-8 chr12 70588615 70588987 + 0.367910579842127 NA intron (NR_037248, intron 4 of 4) intron (NR_037248, intron 4 of 4) 135647 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak1_28_28_-0.276012994177061_4.71997449803904_0.367910579842127-8 chr8 126593793 126594016 + 0.367910579842127 NA promoter-TSS (NM_001164598) promoter-TSS (NM_001164598) -468 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_247_191_0.0713770796851376_7.62065104056373_0.367895766599939 chr5 3801831 3804237 + 0.367895766599939 NA promoter-TSS (NM_001289528) promoter-TSS (NM_001289528) 90 NM_001289528 70797 Mm.130148 NM_001003909 ENSMUSG00000040351 Ankib1 2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386 ankyrin repeat and IBR domain containing 1 protein-coding common_peak1_131_100_0.0947445424994751_6.70558375400153_0.367861014108291 chr7 79273328 79274575 + 0.367861014108291 NA intron (NM_018811, intron 1 of 10) L3|LINE|CR1 685 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_131_100_0.0947445424994751_6.70558375400153_0.367861014108291 chr2 128967394 128968266 + 0.367861014108291 NA exon (NM_178404, exon 1 of 12) exon (NM_178404, exon 1 of 12) 428 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding common_peak1_121_108_-0.128083235047294_6.70414270725328_0.367861014108266 chr8 117332639 117334242 + 0.367861014108266 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -15730 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_167_128_0.0871974814496381_7.05482599614807_0.367416068719772 chr15 76228284 76229628 + 0.367416068719772 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 541 NM_201385 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_156_137_-0.107107145753763_7.05497088390129_0.367416068719772 chr13 16017280 16019432 + 0.367416068719772 NA intron (NM_008380, intron 4 of 4) intron (NM_008380, intron 4 of 4) 5067 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak2_74_56_0.110244450215021_5.88801223927225_0.367306883129917 chr16 23989709 23990504 + 0.367306883129917 NA Intergenic Intergenic -1254 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_74_56_0.110244450215021_5.88801223927225_0.367306883129917 chr12 112808606 112809669 + 0.367306883129917 NA 5' UTR (NM_145450, exon 1 of 5) 5' UTR (NM_145450, exon 1 of 5) 162 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak2_74_56_0.110244450215021_5.88801223927225_0.367306883129917-3 chr4 43965814 43966438 + 0.367306883129917 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 8424 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_75_56_0.129218460807161_5.89749924456832_0.367306883129917 chr13 36528087 36529034 + 0.367306883129917 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 205917 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_75_56_0.129218460807161_5.89749924456832_0.367306883129917-3 chr5 74068043 74068903 + 0.367306883129917 NA promoter-TSS (NM_177561) promoter-TSS (NM_177561) -62 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak2_74_56_0.110244450215021_5.88801223927225_0.367306883129917-2 chr3 10330805 10331397 + 0.367306883129917 NA TTS (NM_001010834) TTS (NM_001010834) 338 NM_001310433 55980 Mm.183042 NM_018864 ENSMUSG00000027531 Impa1 2610002K09Rik|2900059K10Rik|AI325909 inositol (myo)-1(or 4)-monophosphatase 1 protein-coding common_peak2_75_56_0.129218460807161_5.89749924456832_0.367306883129917 chr19 32107493 32108245 + 0.367306883129917 NA Intergenic ERVB3_1-I_MM-int|LTR|ERVK -4729 NM_018830 54447 Mm.491229 NM_018830 ENSMUSG00000024887 Asah2 AI585898 N-acylsphingosine amidohydrolase 2 protein-coding common_peak1_75_56_0.129218460807161_5.89749924456832_0.367306883129917-4 chr8 117283360 117283924 + 0.367306883129917 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 26623 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_75_56_0.129218460807161_5.89749924456832_0.367306883129917-2 chr5 64234136 64235241 + 0.367306883129917 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 4331 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_67_62_-0.174504045736709_5.89002790063156_0.367306883129905-3 chr13 56702701 56703317 + 0.367306883129905 NA promoter-TSS (NM_001164042) promoter-TSS (NM_001164042) -1 NM_008541 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak2_67_62_-0.174504045736709_5.89002790063156_0.367306883129905 chr10 128980089 128981028 + 0.367306883129905 NA Intergenic Intergenic -9356 NM_146861 18373 Mm.377111 NM_146861 ENSMUSG00000069430 Olfr9 MOR269-3 olfactory receptor 9 protein-coding common_peak1_67_62_-0.174504045736709_5.89002790063156_0.367306883129905 chr11 116167361 116168182 + 0.367306883129905 NA 5' UTR (NM_172571, exon 1 of 31) 5' UTR (NM_172571, exon 1 of 31) 407 NM_172571 217335 Mm.35241 NM_172571 ENSMUSG00000020776 Fbf1 1110033G01Rik|5930413D20|mKIAA1863 Fas (TNFRSF6) binding factor 1 protein-coding common_peak2_67_62_-0.174504045736709_5.89002790063156_0.367306883129905-4 chr9 56041850 56042723 + 0.367306883129905 NA intron (NM_001278274, intron 1 of 1) CpG 441 NM_011992 26611 Mm.1782 NM_011992 ENSMUSG00000032320 Rcn2 AA408742|Tcbp49 reticulocalbin 2 protein-coding common_peak2_67_62_-0.174504045736709_5.89002790063156_0.367306883129905-2 chr13 41358433 41358955 + 0.367306883129905 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) 307 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_122_109_-0.129564543696767_6.71657744167628_0.36722421855186 chr15 62037730 62038829 + 0.36722421855186 NA promoter-TSS (NR_132746) promoter-TSS (NR_132746) 293 NR_003368 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_122_109_-0.129564543696767_6.71657744167628_0.36722421855186 chr8 105937260 105938188 + 0.36722421855186 NA exon (NM_013640, exon 2 of 8) exon (NM_013640, exon 2 of 8) 668 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak1_102_77_0.112185146195978_6.34149479196024_0.36713912391627 chr12 86241875 86242920 + 0.36713912391627 NA intron (NM_027405, intron 1 of 9) intron (NM_027405, intron 1 of 9) 539 NM_001324488 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding common_peak1_102_77_0.112185146195978_6.34149479196024_0.36713912391627-4 chr2 164460971 164462111 + 0.36713912391627 NA intron (NM_025575, intron 2 of 3) CpG-8820 570 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_102_77_0.112185146195978_6.34149479196024_0.36713912391627-3 chr19 4962101 4962702 + 0.36713912391627 NA promoter-TSS (NM_025553) promoter-TSS (NM_025553) 95 NM_025553 66419 Mm.28494 NM_025553 ENSMUSG00000024902 Mrpl11 2410001P07Rik|L11mt mitochondrial ribosomal protein L11 protein-coding common_peak1_102_77_0.112185146195978_6.34149479196024_0.36713912391627-6 chr8 85024720 85025549 + 0.36713912391627 NA exon (NM_019652, exon 1 of 7) exon (NM_019652, exon 1 of 7) 153 NM_001357203 56495 Mm.41475 NM_019652 ENSMUSG00000052456 Asna1 1810048H22Rik|ArsA arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) protein-coding common_peak1_102_77_0.112185146195978_6.34149479196024_0.36713912391627-2 chr15 97828967 97830165 + 0.36713912391627 NA intron (NM_001204276, intron 1 of 25) intron (NM_001204276, intron 1 of 25) 2201 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_93_84_-0.142784612408891_6.33799862993326_0.36713912391627 chr16 24886661 24887698 + 0.36713912391627 NA intron (NM_178665, intron 9 of 12) intron (NM_178665, intron 9 of 12) 165324 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_102_77_0.112185146195978_6.34149479196024_0.36713912391627-5 chr8 70540734 70541855 + 0.36713912391627 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 1619 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak1_298_231_0.0662604777595108_7.89111123400733_0.367005826349898 chr8 20122342 20123615 + 0.367005826349898 NA Intergenic Intergenic 174454 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_168_129_0.0845585325174882_7.0646470792872_0.366918605579119 chr9 58298741 58300446 + 0.366918605579119 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 13619 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak2_195_170_-0.0986043306663325_7.36855034955273_0.366842264329488 chr5 114379440 114381112 + 0.366842264329488 NA promoter-TSS (NM_054093) promoter-TSS (NM_054093) 229 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak1_195_170_-0.0986043306663325_7.36855034955273_0.366842264329488 chr8 120003134 120004303 + 0.366842264329488 NA intron (NM_001310635, intron 1 of 14) intron (NM_001310635, intron 1 of 14) 11280 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak2_351_273_0.0599783809167995_8.12802127341893_0.366685080351613 chr8 122139670 122143254 + 0.366685080351613 NA Intergenic Intergenic -140679 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_124_110_-0.119515085017163_6.73465832384152_0.366599446653019-2 chr2 4558677 4560358 + 0.366599446653019 NA promoter-TSS (NM_001177844) promoter-TSS (NM_001177844) -237 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_124_110_-0.119515085017163_6.73465832384152_0.366599446653019 chr8 77517221 77518448 + 0.366599446653019 NA promoter-TSS (NM_030113) promoter-TSS (NM_030113) 73 NM_030113 78514 Mm.165974 NM_030113 ENSMUSG00000037148 Arhgap10 A930033B01Rik|PSGAP-m|PSGAP-s Rho GTPase activating protein 10 protein-coding common_peak2_124_110_-0.119515085017163_6.73465832384152_0.366599446653019 chr11 72607362 72608222 + 0.366599446653019 NA intron (NM_025985, intron 1 of 5) CpG 531 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-7 chr5 34998280 34998915 + 0.36647540798597 NA promoter-TSS (NM_001163512) promoter-TSS (NM_001163512) -481 NM_001163512 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak1_53_39_0.150618756012797_5.39723747289376_0.36647540798597-6 chr6 128299924 128300396 + 0.36647540798597 NA intron (NM_001080979, intron 1 of 10) intron (NM_001080979, intron 1 of 10) 653 NM_001080979 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-2 chr13 6416400 6417111 + 0.36647540798597 NA Intergenic MTEb|LTR|ERVL-MaLR -131402 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-6 chr4 133604069 133604566 + 0.36647540798597 NA Intergenic Intergenic -2149 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-6 chr17 45573733 45574493 + 0.36647540798597 NA promoter-TSS (NM_008302) promoter-TSS (NM_008302) -852 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak1_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-3 chr7 78846937 78847236 + 0.36647540798597 NA intron (NM_029585, intron 1 of 4) CpG 125 NM_029585 76375 Mm.250541 NM_029585 ENSMUSG00000030610 Det1 2610034H20Rik de-etiolated homolog 1 (Arabidopsis) protein-coding common_peak1_53_39_0.150618756012797_5.39723747289376_0.36647540798597-5 chr15 97964272 97964752 + 0.36647540798597 NA intron (NM_201359, intron 1 of 7) intron (NM_201359, intron 1 of 7) 283 NM_001252153 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding common_peak1_53_39_0.150618756012797_5.39723747289376_0.36647540798597 chr10 93361037 93361596 + 0.36647540798597 NA Intergenic Intergenic 25105 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-2 chr10 4267351 4268116 + 0.36647540798597 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 1404 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-4 chr2 52072987 52073803 + 0.36647540798597 NA intron (NM_001355414, intron 2 of 35) CpG-8094 558 NM_175238 51869 Mm.254530 NM_175238 ENSMUSG00000036202 Rif1 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e replication timing regulatory factor 1 protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-9 chr5 149635526 149636232 + 0.36647540798597 NA intron (NM_001347534, intron 1 of 16) CpG 436 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-2 chr17 74527546 74528079 + 0.36647540798597 NA promoter-TSS (NM_007566) promoter-TSS (NM_007566) -483 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-4 chr15 102961552 102962075 + 0.36647540798597 NA Intergenic Intergenic -4983 NM_010462 209448 Mm.31665 NM_010462 ENSMUSG00000022484 Hoxc10 AI506621|Hox-3.6 homeobox C10 protein-coding common_peak1_52_39_0.123841960382498_5.38384907507861_0.36647540798597 chr11 74566780 74567380 + 0.36647540798597 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 23078 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_52_39_0.123841960382498_5.38384907507861_0.36647540798597-3 chr6 88841150 88841808 + 0.36647540798597 NA intron (NR_155424, intron 1 of 11) intron (NR_155424, intron 1 of 11) 456 NM_001362152 80283 Mm.166858 NM_030251 ENSMUSG00000030083 Abtb1 AI847549|BC003234|BPOZ|EF1ABP ankyrin repeat and BTB (POZ) domain containing 1 protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-8 chr5 121710978 121711668 + 0.36647540798597 NA promoter-TSS (NM_009125) promoter-TSS (NM_009125) -286 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding common_peak1_53_39_0.150618756012797_5.39723747289376_0.36647540798597-4 chr13 99385246 99385999 + 0.36647540798597 NA intron (NM_173757, intron 4 of 10) intron (NM_173757, intron 4 of 10) 27204 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-3 chr15 51798288 51798692 + 0.36647540798597 NA intron (NM_080635, intron 3 of 7) intron (NM_080635, intron 3 of 7) 66971 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_52_39_0.123841960382498_5.38384907507861_0.36647540798597-4 chr8 31168883 31169347 + 0.36647540798597 NA promoter-TSS (NM_026453) promoter-TSS (NM_026453) -391 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding common_peak2_52_39_0.123841960382498_5.38384907507861_0.36647540798597-2 chr19 6296219 6296676 + 0.36647540798597 NA intron (NM_010119, intron 3 of 4) intron (NM_010119, intron 3 of 4) -10010 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_53_39_0.150618756012797_5.39723747289376_0.36647540798597-2 chr11 121702677 121703234 + 0.36647540798597 NA intron (NM_144797, intron 1 of 3) CpG 528 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_52_39_0.123841960382498_5.38384907507861_0.36647540798597 chr17 33955892 33956358 + 0.36647540798597 NA promoter-TSS (NM_011296) promoter-TSS (NM_011296) 35 NM_001357329 224705 Mm.448614 NM_172620 ENSMUSG00000024319 Vps52 ARE1|D130068D18|D430041K17Rik|SAC2|Sacm2l|tclw5 VPS52 GARP complex subunit protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-7 chr5 93264444 93265308 + 0.36647540798597 NA Intergenic Intergenic -2697 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597-5 chr17 15704272 15704820 + 0.36647540798597 NA promoter-TSS (NM_007690) promoter-TSS (NM_007690) -421 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak2_52_39_0.123841960382498_5.38384907507861_0.36647540798597-3 chr5 121384943 121385429 + 0.36647540798597 NA intron (NM_172275, intron 1 of 11) intron (NM_172275, intron 1 of 11) 223 NM_001359947 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_46_44_-0.21819179302762_5.38275719981586_0.36647540798597 chr10 77515429 77515834 + 0.36647540798597 NA exon (NM_133998, exon 1 of 6) exon (NM_133998, exon 1 of 6) 182 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-8 chr5 146231243 146231828 + 0.36647540798597 NA 5' UTR (NM_001359990, exon 1 of 13) 5' UTR (NM_001359990, exon 1 of 13) 285 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding common_peak1_52_39_0.123841960382498_5.38384907507861_0.36647540798597-2 chr17 31305026 31305875 + 0.36647540798597 NA intron (NM_001242427, intron 2 of 19) intron (NM_001242427, intron 2 of 19) 9226 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597 chr1 40445684 40446550 + 0.36647540798597 NA exon (NM_010743, exon 7 of 8) exon (NM_010743, exon 7 of 8) 6488 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-10 chrX 144318053 144318871 + 0.36647540798597 NA intron (NR_037145, intron 1 of 26) CpG 496 NM_026247 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031 asparagine-linked glycosylation 13 protein-coding unique_peak1_52_39_0.123841960382498_5.38384907507861_0.36647540798597 chr9 36766964 36767537 + 0.36647540798597 NA intron (NM_008408, intron 1 of 17) intron (NM_008408, intron 1 of 17) 328 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-3 chr13 41386782 41387536 + 0.36647540798597 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -28158 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_46_44_-0.21819179302762_5.38275719981586_0.36647540798597-5 chr2 128966615 128967112 + 0.36647540798597 NA promoter-TSS (NM_178404) promoter-TSS (NM_178404) -539 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding common_peak1_53_39_0.150618756012797_5.39723747289376_0.36647540798597-3 chr12 17728686 17729388 + 0.36647540798597 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 38228 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_53_39_0.150618756012797_5.39723747289376_0.36647540798597 chr12 31059104 31059615 + 0.36647540798597 NA Intergenic Intergenic -14609 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding common_peak2_209_161_0.0782316327421455_7.3789658192557_0.36644568455195 chr19 7340287 7342405 + 0.36644568455195 NA 5' UTR (NM_007928, exon 1 of 18) 5' UTR (NM_007928, exon 1 of 18) 514 NM_001080389 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_103_78_0.107647467131521_6.35760448174286_0.366327466620127-2 chr8 69088820 69089795 + 0.366327466620127 NA promoter-TSS (NM_153054) promoter-TSS (NM_153054) -85 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak1_103_78_0.107647467131521_6.35760448174286_0.366327466620127 chr1 59670148 59671155 + 0.366327466620127 NA intron (NM_009460, intron 1 of 4) L1MDb|LINE|L1 183 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding common_peak1_103_78_0.107647467131521_6.35760448174286_0.366327466620127-2 chr15 38451773 38452798 + 0.366327466620127 NA Intergenic Intergenic 38262 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_103_78_0.107647467131521_6.35760448174286_0.366327466620127 chr14 76740910 76742224 + 0.366327466620127 NA Intergenic L2c|LINE|L2 -18564 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_240_207_-0.0851156920328018_7.65788187212469_0.366236148832632 chr12 16894163 16896349 + 0.366236148832632 NA exon (NM_009072, exon 1 of 33) exon (NM_009072, exon 1 of 33) 278 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak1_68_63_-0.176311095976291_5.91184445201185_0.366201338534461-3 chr6 82753417 82754006 + 0.366201338534461 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 20743 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_69_63_-0.155698987027441_5.92215050648628_0.366201338534461 chr18 68157784 68158329 + 0.366201338534461 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -69890 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_68_63_-0.176311095976291_5.91184445201185_0.366201338534461 chr13 5803809 5804566 + 0.366201338534461 NA Intergenic Intergenic 53905 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_69_63_-0.155698987027441_5.92215050648628_0.366201338534461 chr18 75379509 75380758 + 0.366201338534461 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 12768 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_68_63_-0.176311095976291_5.91184445201185_0.366201338534461-2 chr19 4442004 4442839 + 0.366201338534461 NA intron (NR_045989, intron 1 of 4) B1F2|SINE|Alu 2862 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_69_63_-0.155698987027441_5.92215050648628_0.366201338534461-2 chr2 140066237 140066740 + 0.366201338534461 NA non-coding (NR_110350, exon 1 of 13) non-coding (NR_110350, exon 1 of 13) 317 NM_001159640 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak1_68_63_-0.176311095976291_5.91184445201185_0.366201338534461-4 chr9 102644262 102645303 + 0.366201338534461 NA Intergenic Intergenic 18486 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_68_63_-0.176311095976291_5.91184445201185_0.366201338534461 chr18 60728644 60729798 + 0.366201338534461 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) -1655 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_69_63_-0.155698987027441_5.92215050648628_0.366201338534461-4 chr7 128611404 128612475 + 0.366201338534461 NA intron (NM_178641, intron 1 of 19) intron (NM_178641, intron 1 of 19) 574 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding common_peak2_68_63_-0.176311095976291_5.91184445201185_0.366201338534461-2 chr3 9751285 9751931 + 0.366201338534461 NA intron (NM_053182, intron 2 of 7) intron (NM_053182, intron 2 of 7) 82071 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak1_69_63_-0.155698987027441_5.92215050648628_0.366201338534461-3 chr5 142928799 142929638 + 0.366201338534461 NA Intergenic CpG -22464 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_76_57_0.122853457043617_5.91940772364938_0.366201338534449 chr4 155173753 155174265 + 0.366201338534449 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 48526 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_76_57_0.122853457043617_5.91940772364938_0.366201338534449 chr19 44756867 44757740 + 0.366201338534449 NA promoter-TSS (NM_011037) promoter-TSS (NM_011037) -91 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_76_57_0.122853457043617_5.91940772364938_0.366201338534449-3 chr8 72474399 72475125 + 0.366201338534449 NA exon (NM_138585, exon 2 of 18) exon (NM_138585, exon 2 of 18) 471 NM_001359024 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak1_76_57_0.122853457043617_5.91940772364938_0.366201338534449-2 chr8 70764905 70765795 + 0.366201338534449 NA intron (NM_023065, intron 1 of 7) B1_Mus1|SINE|Alu 1313 NM_023065 65972 Mm.30241 NM_023065 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak1_198_172_-0.0936198752887725_7.38781828999234_0.366053856375587 chr2 156721080 156722345 + 0.366053856375587 NA promoter-TSS (NR_040505) promoter-TSS (NR_040505) 433 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak2_125_111_-0.121039603384013_6.7468351203656_0.365986360980867-2 chr7 66369390 66371193 + 0.365986360980867 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 11433 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_125_111_-0.121039603384013_6.7468351203656_0.365986360980867 chr1 171411005 171412591 + 0.365986360980867 NA 5' UTR (NM_009480, exon 1 of 10) 5' UTR (NM_009480, exon 1 of 10) 117 NM_009480 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding common_peak1_160_140_-0.102093980601654_7.08850436209797_0.365945719497339 chr1 10232039 10233527 + 0.365945719497339 NA promoter-TSS (NM_001102430) promoter-TSS (NM_001102430) -113 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_160_140_-0.102093980601654_7.08850436209797_0.365945719497339 chr8 36247751 36249254 + 0.365945719497339 NA intron (NM_001081150, intron 1 of 11) CpG 1014 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak2_412_321_0.0560332976357039_8.35893352693247_0.365914280109814 chr6 88938605 88941653 + 0.365914280109814 NA Intergenic Intergenic 37878 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_414_322_0.0584802058043845_8.36463045759612_0.365717033626055 chr2 165882897 165886945 + 0.365717033626055 NA promoter-TSS (NM_001252584) promoter-TSS (NM_001252584) -83 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_96_86_-0.13133294143765_6.3772770251299_0.365535503818061-3 chr6 42513773 42514640 + 0.365535503818061 NA Intergenic Intergenic 24814 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding common_peak2_95_86_-0.146177808549965_6.36985459157374_0.365535503818061 chr9 20459306 20460238 + 0.365535503818061 NA intron (NM_011753, intron 1 of 9) CpG 388 NM_011753 22688 Mm.107441 NM_011753 ENSMUSG00000063108 Zfp26 5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52 zinc finger protein 26 protein-coding common_peak1_95_86_-0.146177808549965_6.36985459157374_0.365535503818061 chr1 136227617 136228450 + 0.365535503818061 NA intron (NM_028872, intron 1 of 9) intron (NM_028872, intron 1 of 9) 6247 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding common_peak2_96_86_-0.13133294143765_6.3772770251299_0.365535503818061-2 chr3 69005141 69006462 + 0.365535503818061 NA intron (NM_001356976, intron 1 of 23) CpG 1063 NM_133786 70099 Mm.206841 NM_133786 ENSMUSG00000034349 Smc4 2500002A22Rik|C79747|SMC-4|Smc4l1 structural maintenance of chromosomes 4 protein-coding common_peak2_96_86_-0.13133294143765_6.3772770251299_0.365535503818061 chr15 80234091 80234681 + 0.365535503818061 NA intron (NM_001357660, intron 1 of 5) CpG 306 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_96_86_-0.13133294143765_6.3772770251299_0.365535503818061-2 chr12 69158306 69159063 + 0.365535503818061 NA exon (NM_009093, exon 2 of 3) exon (NM_009093, exon 2 of 3) 502 NM_009093 20090 Mm.379006 NM_009093 ENSMUSG00000034892 Rps29 - ribosomal protein S29 protein-coding common_peak1_96_86_-0.13133294143765_6.3772770251299_0.365535503818061-3 chr9 102650041 102651572 + 0.365535503818061 NA Intergenic Intergenic 24510 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_96_86_-0.13133294143765_6.3772770251299_0.365535503818061 chr11 3374512 3375321 + 0.365535503818061 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) -3512 NM_173053 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-8 chr2 32173806 32174336 + 0.36542888694933 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 22923 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding unique_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933 chr2 152741263 152741718 + 0.36542888694933 NA Intergenic Intergenic 5239 NM_001355113 15901 Mm.444 NM_010495 ENSMUSG00000042745 Id1 AI323524|D2Wsu140e|Idb1|bHLHb24 inhibitor of DNA binding 1 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-7 chr17 46269198 46269909 + 0.36542888694933 NA intron (NM_001252475, intron 1 of 8) intron (NM_001252475, intron 1 of 8) 13473 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-10 chr5 113889041 113889441 + 0.36542888694933 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 19465 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-4 chr19 29806196 29806437 + 0.36542888694933 NA promoter-TSS (NM_172836) promoter-TSS (NM_172836) -307 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-3 chr11 62077001 62077327 + 0.36542888694933 NA 5' UTR (NM_001029936, exon 1 of 13) 5' UTR (NM_001029936, exon 1 of 13) 140 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-12 chr9 64018165 64018498 + 0.36542888694933 NA intron (NM_008542, intron 1 of 3) intron (NM_008542, intron 1 of 3) 3728 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-6 chr7 29168659 29169310 + 0.36542888694933 NA promoter-TSS (NM_182927) promoter-TSS (NM_182927) -337 NM_182927 101809 Mm.377262 NM_182927 ENSMUSG00000037239 Spred3 AW047143|D130060H24Rik|Spred-3 sprouty-related, EVH1 domain containing 3 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-4 chr11 60727688 60728119 + 0.36542888694933 NA promoter-TSS (NR_039559) promoter-TSS (NR_039559) -495 NM_001009927 237781 Mm.339760 NM_001009927 ENSMUSG00000018599 Mief2 AI482195|Gm11|Smcr7 mitochondrial elongation factor 2 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-12 chr6 72927115 72927544 + 0.36542888694933 NA Intergenic Intergenic -27350 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-2 chr10 58382753 58383238 + 0.36542888694933 NA intron (NM_201242, intron 1 of 9) intron (NM_201242, intron 1 of 9) -11378 NM_001193303 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-6 chr17 31965951 31966515 + 0.36542888694933 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 68275 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-7 chr2 137408898 137409263 + 0.36542888694933 NA Intergenic Intergenic -292560 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-11 chr5 137107325 137107820 + 0.36542888694933 NA Intergenic PB1D7|SINE|Alu 8635 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933 chr1 43151607 43152031 + 0.36542888694933 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 12142 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-10 chr3 52576449 52576769 + 0.36542888694933 NA Intergenic Intergenic 59645 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-2 chr11 6443524 6443910 + 0.36542888694933 NA intron (NM_029938, intron 1 of 4) intron (NM_029938, intron 1 of 4) 726 NM_029938 77605 Mm.27624 NM_029938 ENSMUSG00000041126 H2afv C530002L11Rik|H2a.z-2|H2av|Tg(Wnt1-cre)11Rth|Wnt1-Cre|Wnt1::Cre|Wnt1cre H2A histone family, member V protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-3 chr11 16810469 16810795 + 0.36542888694933 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 58429 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-12 chr9 111405289 111405664 + 0.36542888694933 NA Intergenic Intergenic -33605 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-4 chr13 13163605 13164133 + 0.36542888694933 NA Intergenic Intergenic -18847 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-2 chr18 53861702 53861926 + 0.36542888694933 NA promoter-TSS (NM_152809) promoter-TSS (NM_152809) -299 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-7 chr14 8214253 8214706 + 0.36542888694933 NA promoter-TSS (NM_001305936) promoter-TSS (NM_001305936) -23 NM_001305936 71393 Mm.292712 NM_027782 ENSMUSG00000021752 Kctd6 5430433B02Rik|AU044285 potassium channel tetramerisation domain containing 6 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-5 chr14 30564947 30565349 + 0.36542888694933 NA intron (NM_009388, intron 4 of 13) intron (NM_009388, intron 4 of 13) -7001 NR_037237 100526475 NR_037237 ENSMUSG00000093156 Mir3076 mir-3076|mmu-mir-3076 microRNA 3076 ncRNA common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-5 chr19 41801512 41801914 + 0.36542888694933 NA intron (NM_027667, intron 1 of 11) CpG 371 NM_001163495 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding unique_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-3 chr6 34176615 34176967 + 0.36542888694933 NA exon (NM_021435, exon 1 of 10) exon (NM_021435, exon 1 of 10) 263 NM_021435 58246 Mm.245527 NM_021435 ENSMUSG00000018999 Slc35b4 4930474D06Rik|AB041549|AW494345 solute carrier family 35, member B4 protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-4 chr17 87826619 87826990 + 0.36542888694933 NA Intergenic Intergenic -28810 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-9 chr2 167828186 167828502 + 0.36542888694933 NA Intergenic Intergenic -103983 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-11 chr7 28825341 28825653 + 0.36542888694933 NA intron (NM_016772, intron 1 of 9) intron (NM_016772, intron 1 of 9) 159 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-5 chr11 103381841 103382054 + 0.36542888694933 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18255 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-11 chr6 35424414 35424931 + 0.36542888694933 NA Intergenic Intergenic 93826 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933 chr1 62712674 62713022 + 0.36542888694933 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 9531 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933 chr10 44268554 44269043 + 0.36542888694933 NA intron (NM_001358596, intron 1 of 6) intron (NM_001358596, intron 1 of 6) 459 NM_001358596 11793 Mm.22264 NM_053069 ENSMUSG00000038160 Atg5 2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy autophagy related 5 protein-coding unique_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933 chr11 62813533 62814095 + 0.36542888694933 NA Intergenic Intergenic -6439 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933 chr1 92770049 92770389 + 0.36542888694933 NA Intergenic Intergenic -61426 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-8 chr3 95066079 95066525 + 0.36542888694933 NA intron (NM_001293707, intron 9 of 14) intron (NM_001293707, intron 9 of 14) -23688 NM_008951 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-6 chr12 26414626 26415094 + 0.36542888694933 NA TTS (NR_105856) TTS (NR_105856) 150 NR_105856 102466676 NR_105856 ENSMUSG00000098771 Mir6538 Gm27439|mmu-mir-6538 microRNA 6538 ncRNA common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-7 chr8 8605116 8605690 + 0.36542888694933 NA Intergenic Intergenic 55370 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding unique_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-2 chr3 97227823 97228324 + 0.36542888694933 NA promoter-TSS (NM_029933) promoter-TSS (NM_029933) -709 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-3 chr14 20836815 20837217 + 0.36542888694933 NA intron (NM_008873, intron 1 of 10) intron (NM_008873, intron 1 of 10) 354 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-9 chr3 52576460 52576771 + 0.36542888694933 NA Intergenic Intergenic 59651 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-9 chr6 67105010 67105597 + 0.36542888694933 NA Intergenic Intergenic -67896 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding unique_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933 chr15 81193110 81193695 + 0.36542888694933 NA TTS (NR_015603) TTS (NR_015603) 2549 NR_015603 67638 Mm.390832 NM_026288 ENSMUSG00000047938 4930483J18Rik - RIKEN cDNA 4930483J18 gene ncRNA common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-3 chr19 4478118 4478383 + 0.36542888694933 NA Intergenic Intergenic -1107 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-9 chr9 49816931 49817522 + 0.36542888694933 NA Intergenic Intergenic -17833 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-8 chr18 54986239 54986756 + 0.36542888694933 NA intron (NM_175751, intron 2 of 9) intron (NM_175751, intron 2 of 9) 3683 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-5 chr2 145934307 145934706 + 0.36542888694933 NA promoter-TSS (NM_175280) promoter-TSS (NM_175280) 194 NM_025820 66877 Mm.248755 NM_025820 ENSMUSG00000001767 Crnkl1 1200013P10Rik|5730590A01Rik|C80326|crn crooked neck pre-mRNA splicing factor 1 protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-6 chr2 26503175 26503663 + 0.36542888694933 NA promoter-TSS (NR_132655) promoter-TSS (NR_132655) 403 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak2_34_25_0.150916274404712_4.77589785534345_0.36542888694933-10 chr7 16221623 16221897 + 0.36542888694933 NA 5' UTR (NM_001285931, exon 1 of 17) 5' UTR (NM_001285931, exon 1 of 17) 233 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding unique_peak2_29_29_-0.27635805040939_4.76871157040382_0.36542888694933 chr3 36000137 36000603 + 0.36542888694933 NA non-coding (NR_029456, exon 1 of 3) non-coding (NR_029456, exon 1 of 3) 308 NM_023644 72039 Mm.249016 NM_023644 ENSMUSG00000027709 Mccc1 1810045E08Rik|2310058B18Rik|MCCalpha|Mcca|R75106 methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) protein-coding unique_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-2 chr9 111587866 111588340 + 0.36542888694933 NA intron (NM_016853, intron 8 of 10) A-rich|Low_complexity|Low_complexity 102245 NM_016853 20840 Mm.1414 NM_016853 ENSMUSG00000032502 Stac - src homology three (SH3) and cysteine rich domain protein-coding common_peak1_34_25_0.150916274404712_4.77589785534345_0.36542888694933-8 chr8 128689611 128690053 + 0.36542888694933 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 4178 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_29_29_-0.27635805040939_4.76871157040382_0.36542888694933-2 chr10 93453488 93453852 + 0.36542888694933 NA intron (NM_008517, intron 1 of 18) CpG 274 NM_008517 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak1_126_112_-0.122539340841272_6.75890929199455_0.365384636616259 chr18 53862237 53863331 + 0.365384636616259 NA intron (NM_152809, intron 1 of 12) CpG 671 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_126_112_-0.122539340841272_6.75890929199455_0.365384636616259-2 chr4 141310582 141311911 + 0.365384636616259 NA intron (NM_010139, intron 3 of 16) intron (NM_010139, intron 3 of 16) 10025 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak2_126_112_-0.122539340841272_6.75890929199455_0.365384636616259-2 chr3 145117958 145119394 + 0.365384636616259 NA promoter-TSS (NM_025714) promoter-TSS (NM_025714) 76 NM_025714 52184 Mm.259105 NM_025714 ENSMUSG00000028256 Odf2l 4733401D09Rik|9630045K08Rik|D3Ertd250e outer dense fiber of sperm tails 2-like protein-coding common_peak2_126_112_-0.122539340841272_6.75890929199455_0.365384636616259 chr11 75655308 75656644 + 0.365384636616259 NA promoter-TSS (NM_001080775) promoter-TSS (NM_001080775) -39 NM_001080775 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak2_136_104_0.0919700564496573_6.76023054589095_0.365384636616234 chr15 53221691 53223201 + 0.365384636616234 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 123737 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_136_104_0.0919700564496573_6.76023054589095_0.365384636616234 chr1 156035375 156036916 + 0.365384636616234 NA exon (NM_001160018, exon 1 of 10) intron (NM_172843, intron 1 of 6) 109 NM_001160182 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak2_200_174_-0.0958774715377304_7.40327237606346_0.365284117237185 chr19 28557824 28559845 + 0.365284117237185 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -119390 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_70_64_-0.157747071321723_5.94349427736759_0.365132085969548-2 chr10 127063614 127064498 + 0.365132085969548 NA intron (NM_001355005, intron 1 of 6) intron (NM_001355005, intron 1 of 6) 521 NM_001355005 12567 Mm.6839 NM_009870 ENSMUSG00000006728 Cdk4 Crk3 cyclin-dependent kinase 4 protein-coding common_peak1_77_58_0.116675747747482_5.94098092323558_0.365132085969548-3 chr4 59373494 59374342 + 0.365132085969548 NA intron (NM_001163288, intron 8 of 16) intron (NM_001163288, intron 8 of 16) 64715 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_70_64_-0.157747071321723_5.94349427736759_0.365132085969548 chr11 106500948 106501539 + 0.365132085969548 NA TTS (NR_030703) TTS (NR_030703) 252 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak2_70_64_-0.157747071321723_5.94349427736759_0.365132085969548 chr10 84576604 84577104 + 0.365132085969548 NA promoter-TSS (NM_146008) promoter-TSS (NM_146008) -93 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding common_peak1_77_58_0.116675747747482_5.94098092323558_0.365132085969548-2 chr13 28884721 28885620 + 0.365132085969548 NA non-coding (NR_045053, exon 1 of 9) non-coding (NR_045053, exon 1 of 9) 252 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak2_70_64_-0.157747071321723_5.94349427736759_0.365132085969548-4 chr8 73353799 73354417 + 0.365132085969548 NA promoter-TSS (NM_010687) promoter-TSS (NM_010687) -568 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_70_64_-0.157747071321723_5.94349427736759_0.365132085969548-2 chr2 112379293 112380200 + 0.365132085969548 NA intron (NM_024254, intron 1 of 9) intron (NM_024254, intron 1 of 9) 535 NM_024254 72425 Mm.425091 NM_024254 ENSMUSG00000027132 Katnbl1 2410042D21Rik|AA166487|AA473307|AI467442 katanin p80 subunit B like 1 protein-coding common_peak2_70_64_-0.157747071321723_5.94349427736759_0.365132085969548-3 chr17 87265108 87265861 + 0.365132085969548 NA intron (NM_176808, intron 1 of 4) intron (NM_176808, intron 1 of 4) 463 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding common_peak1_70_64_-0.157747071321723_5.94349427736759_0.365132085969548-3 chr2 172644165 172644649 + 0.365132085969548 NA Intergenic Intergenic 93416 NM_001159696 21420 Mm.3629 NM_009335 ENSMUSG00000028640 Tfap2c AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c transcription factor AP-2, gamma protein-coding common_peak1_77_58_0.116675747747482_5.94098092323558_0.365132085969548 chr11 31671331 31671877 + 0.365132085969548 NA exon (NM_001024919, exon 1 of 4) exon (NM_001024919, exon 1 of 4) 258 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_162_142_-0.104728347053965_7.10750716325141_0.365001150952973 chr10 79987847 79989608 + 0.365001150952973 NA exon (NM_007725, exon 1 of 7) exon (NM_007725, exon 1 of 7) 127 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding common_peak1_54_40_0.141280296732855_5.42819215298451_0.36493371439645-2 chr2 179976850 179977253 + 0.36493371439645 NA promoter-TSS (NM_001081092) promoter-TSS (NM_001081092) 198 NR_033782 66730 Mm.31773 NR_033782 ENSMUSG00000085704 4921531C22Rik - RIKEN cDNA 4921531C22 gene ncRNA common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-3 chr16 23456362 23457323 + 0.36493371439645 NA intron (NM_008555, intron 13 of 15) intron (NM_008555, intron 13 of 15) 27709 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-3 chr19 43523780 43524079 + 0.36493371439645 NA intron (NM_010324, intron 1 of 8) intron (NM_010324, intron 1 of 8) 676 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_54_40_0.141280296732855_5.42819215298451_0.36493371439645 chr13 52652194 52652669 + 0.36493371439645 NA Intergenic Intergenic 55549 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak2_47_45_-0.219741289185007_5.41369131146451_0.36493371439645 chr3 90476149 90477058 + 0.36493371439645 NA intron (NM_026374, intron 1 of 13) intron (NM_026374, intron 1 of 13) 402 NM_026374 67781 Mm.227258 NM_026374 ENSMUSG00000001016 Ilf2 6230405A16Rik|TEG-267|Tex261|Tex267 interleukin enhancer binding factor 2 protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-3 chr14 28033368 28034189 + 0.36493371439645 NA intron (NM_001347497, intron 12 of 19) intron (NM_001347497, intron 12 of 19) 411371 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding common_peak1_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-6 chr8 123949421 123949931 + 0.36493371439645 NA promoter-TSS (NM_172288) promoter-TSS (NM_172288) -411 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak2_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-5 chr8 95081262 95081932 + 0.36493371439645 NA intron (NM_028805, intron 1 of 19) intron (NM_028805, intron 1 of 19) 396 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-4 chr16 76373174 76373603 + 0.36493371439645 NA promoter-TSS (NM_173440) promoter-TSS (NM_173440) -339 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-5 chr3 53463739 53464192 + 0.36493371439645 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) 148 NM_173382 212127 Mm.491292 NM_173382 ENSMUSG00000049504 Proser1 2810046L04Rik|9330161F11 proline and serine rich 1 protein-coding common_peak2_54_40_0.141280296732855_5.42819215298451_0.36493371439645-2 chr4 145233370 145234139 + 0.36493371439645 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 13116 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-5 chr4 126110633 126111119 + 0.36493371439645 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 6919 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-6 chr9 58581585 58582061 + 0.36493371439645 NA promoter-TSS (NM_009145) promoter-TSS (NM_009145) -417 NM_001293673 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-4 chr17 55944966 55945359 + 0.36493371439645 NA promoter-TSS (NM_146249) promoter-TSS (NM_146249) 97 NM_146249 240120 Mm.441018 NM_146249 ENSMUSG00000062101 Zfp119b - zinc finger protein 119b protein-coding common_peak1_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-5 chr6 40471478 40471906 + 0.36493371439645 NA 5' UTR (NM_001286664, exon 1 of 6) 5' UTR (NM_001286664, exon 1 of 6) 224 NM_001286663 381760 Mm.276356 NM_028358 ENSMUSG00000029911 Ssbp1 2810480P10Rik|G630031O20Rik|MtSSB|mtDBP single-stranded DNA binding protein 1 protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-8 chr8 128660633 128661223 + 0.36493371439645 NA Intergenic Intergenic -24726 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_48_45_-0.190203812690958_5.42846004971153_0.36493371439645 chr14 28033391 28034164 + 0.36493371439645 NA intron (NM_001347497, intron 12 of 19) intron (NM_001347497, intron 12 of 19) 411370 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-6 chr7 134108869 134109753 + 0.36493371439645 NA intron (NM_007400, intron 3 of 22) intron (NM_007400, intron 3 of 22) 115786 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645 chr10 91124286 91125032 + 0.36493371439645 NA promoter-TSS (NM_133668) promoter-TSS (NM_133668) -696 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645 chr10 108436789 108437467 + 0.36493371439645 NA Intergenic Intergenic 104939 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-2 chr3 144992876 144993255 + 0.36493371439645 NA Intergenic Intergenic -18020 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak1_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-2 chr16 93292418 93293109 + 0.36493371439645 NA Intergenic Intergenic 60426 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA unique_peak1_54_40_0.141280296732855_5.42819215298451_0.36493371439645 chr13 43559560 43560135 + 0.36493371439645 NA exon (NM_001081059, exon 1 of 9) exon (NM_001081059, exon 1 of 9) 344 NM_001081059 76137 Mm.426290 NM_001081059 ENSMUSG00000021371 Mcur1 6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a mitochondrial calcium uniporter regulator 1 protein-coding common_peak2_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-3 chr4 66336754 66337534 + 0.36493371439645 NA intron (NM_207109, intron 1 of 22) intron (NM_207109, intron 1 of 22) 67339 NM_019514 56079 Mm.445312 NM_019514 ENSMUSG00000028373 Astn2 1d8|Astnl|bM452J22.1 astrotactin 2 protein-coding common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-7 chr8 126876446 126877117 + 0.36493371439645 NA Intergenic Intergenic 27761 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-8 chr8 128449613 128450245 + 0.36493371439645 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 90688 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-2 chr11 121646866 121647441 + 0.36493371439645 NA intron (NM_178664, intron 4 of 12) L3b|LINE|CR1 25998 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-4 chr4 137077042 137077986 + 0.36493371439645 NA Intergenic Intergenic -28819 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-7 chr7 84689342 84689887 + 0.36493371439645 NA promoter-TSS (NR_038175) promoter-TSS (NR_038175) -26 NR_038175 72495 Mm.382914 NR_038175 ENSMUSG00000085236 2610206C17Rik - RIKEN cDNA 2610206C17 gene ncRNA common_peak1_48_45_-0.190203812690958_5.42846004971153_0.36493371439645-4 chr3 95110798 95111286 + 0.36493371439645 NA promoter-TSS (NM_009336) promoter-TSS (NM_009336) 0 NM_009336 21427 Mm.133919 NM_009336 ENSMUSG00000008958 Vps72 Tcfl1|YL-1 vacuolar protein sorting 72 protein-coding common_peak2_54_40_0.141280296732855_5.42819215298451_0.36493371439645 chr18 12643274 12643651 + 0.36493371439645 NA promoter-TSS (NM_028341) promoter-TSS (NM_028341) -71 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_54_40_0.141280296732855_5.42819215298451_0.36493371439645-3 chr7 100590922 100591486 + 0.36493371439645 NA intron (NR_003559, intron 1 of 7) intron (NR_003559, intron 1 of 7) 210 NR_153425 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-2 chr10 93188812 93189462 + 0.36493371439645 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 26352 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_47_45_-0.219741289185007_5.41369131146451_0.36493371439645-6 chr3 94837440 94837861 + 0.36493371439645 NA promoter-TSS (NM_172683) promoter-TSS (NM_172683) 83 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak2_128_113_-0.112866861301098_6.77645658351419_0.364793960577973-2 chr3 60500053 60502000 + 0.364793960577973 NA promoter-TSS (NM_001253710) promoter-TSS (NM_001253710) -153 NM_001253710 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak1_128_113_-0.112866861301098_6.77645658351419_0.364793960577973 chr4 137473093 137474596 + 0.364793960577973 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 5041 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_128_113_-0.112866861301098_6.77645658351419_0.364793960577973 chr17 29093919 29095116 + 0.364793960577973 NA intron (NM_007669, intron 1 of 2) CpG 748 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak2_127_113_-0.124014908666678_6.7708825598314_0.364793960577973 chr11 72847083 72848381 + 0.364793960577973 NA intron (NM_001045536, intron 11 of 54) ID4|SINE|ID 51506 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak2_97_87_-0.133128454844487_6.39286739121505_0.364762527077679 chr11 21091315 21092308 + 0.364762527077679 NA intron (NM_023324, intron 1 of 6) CpG 487 NM_023324 67245 Mm.28957 NM_023324 ENSMUSG00000020134 Peli1 2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e pellino 1 protein-coding common_peak2_97_87_-0.133128454844487_6.39286739121505_0.364762527077679-3 chr3 108085617 108086665 + 0.364762527077679 NA promoter-TSS (NM_001346665) promoter-TSS (NM_001346665) 165 NM_001358018 791415 Mm.374791 NM_001358018 ENSMUSG00000056411 Gm12500 - predicted gene 12500 protein-coding common_peak1_105_80_0.098865072811992_6.38928253929062_0.364762527077679 chr6 50379647 50380948 + 0.364762527077679 NA intron (NM_001163645, intron 2 of 21) B2_Mm1a|SINE|B2 2540 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_105_80_0.098865072811992_6.38928253929062_0.364762527077679 chr8 25720075 25720667 + 0.364762527077679 NA TTS (NM_001081269) TTS (NM_001081269) 323 NR_121643 71910 Mm.385055 NM_028000 ENSMUSG00000031570 Plpp5 1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1|Ppapdc1b phospholipid phosphatase 5 protein-coding common_peak1_97_87_-0.133128454844487_6.39286739121505_0.364762527077679 chr10 4110872 4112135 + 0.364762527077679 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 101617 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_97_87_-0.133128454844487_6.39286739121505_0.364762527077679-2 chr17 36957594 36958905 + 0.364762527077679 NA promoter-TSS (NM_029602) promoter-TSS (NM_029602) 179 NM_023162 66136 Mm.486229 NM_023162 ENSMUSG00000036315 Znrd1 1110014N07Rik|Rpa12 zinc ribbon domain containing, 1 protein-coding common_peak2_97_87_-0.133128454844487_6.39286739121505_0.364762527077679-2 chr19 47137429 47138456 + 0.364762527077679 NA 5' UTR (NM_133746, exon 1 of 3) 5' UTR (NM_133746, exon 1 of 3) 352 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak2_105_80_0.098865072811992_6.38928253929062_0.364762527077679-2 chrX 151803272 151804291 + 0.364762527077679 NA intron (NM_021523, intron 1 of 82) CpG 499 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak1_174_134_0.0800873351023634_7.11685926460201_0.364539102122531 chr4 145238892 145240369 + 0.364539102122531 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 7240 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_139_106_0.0957790469981692_6.78935650990023_0.364214031277949 chr18 75501217 75502415 + 0.364214031277949 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -12829 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_138_106_0.08551006498194_6.78422201889212_0.364214031277949 chr4 43383144 43384447 + 0.364214031277949 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) 1813 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_138_106_0.08551006498194_6.78422201889212_0.364214031277949 chr11 106787246 106788326 + 0.364214031277949 NA intron (NM_001355676, intron 2 of 13) CpG 708 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-11 chr2 48441780 48442017 + 0.364171515310935 NA Intergenic Intergenic -372211 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-9 chr3 152209020 152209391 + 0.364171515310935 NA intron (NM_001356363, intron 1 of 3) intron (NM_001356363, intron 1 of 3) 878 NM_001356363 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-17 chr6 17405578 17405983 + 0.364171515310935 NA Intergenic Intergenic -58177 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-8 chr2 6074920 6075249 + 0.364171515310935 NA Intergenic Intergenic 55101 NM_144883 227545 Mm.133542 NM_144883 ENSMUSG00000045319 Proser2 5430407P10Rik|AU067770 proline and serine rich 2 protein-coding unique_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-4 chr8 121628483 121628789 + 0.364171515310935 NA exon (NM_080855, exon 2 of 13) exon (NM_080855, exon 2 of 13) 23297 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-11 chr19 5039566 5040087 + 0.364171515310935 NA exon (NM_175383, exon 1 of 2) exon (NM_175383, exon 1 of 2) 1000 NM_175383 108902 Mm.29628 NM_175383 ENSMUSG00000047379 B4gat1 1500032M01Rik|B3gnt1|B3gnt6|BETA3GNT1|iGAT|iGNT beta-1,4-glucuronyltransferase 1 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-9 chr16 24136045 24136378 + 0.364171515310935 NA Intergenic Intergenic -53521 NR_155457 108168278 Mm.417246 NR_155457 Gm46545 - predicted gene, 46545 ncRNA unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-3 chr11 64978460 64978757 + 0.364171515310935 NA promoter-TSS (NM_023479) promoter-TSS (NM_023479) -427 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-20 chr8 25273792 25274049 + 0.364171515310935 NA Intergenic Intergenic 32350 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-13 chr2 150136265 150136546 + 0.364171515310935 NA intron (NM_023266, intron 1 of 2) intron (NM_023266, intron 1 of 2) 273 NM_023266 104348 Mm.485851 NM_023266 ENSMUSG00000068134 Zfp120 AI315103|E030042N05Rik|F80|MZF31|Zfp844 zinc finger protein 120 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935 chr1 91300028 91300322 + 0.364171515310935 NA intron (NM_016717, intron 1 of 11) intron (NM_016717, intron 1 of 11) 1837 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-6 chr2 135679702 135680002 + 0.364171515310935 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) 20305 NM_001355156 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-12 chr4 135354544 135354804 + 0.364171515310935 NA Intergenic Intergenic -1460 NM_001130477 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding unique_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-3 chr5 110402587 110402881 + 0.364171515310935 NA intron (NM_001142642, intron 4 of 18) intron (NM_001142642, intron 4 of 18) -15607 NM_028596 381668 Mm.348782 NM_028596 ENSMUSG00000043323 Fbrsl1 2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545 fibrosin-like 1 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-20 chr9 6431265 6431466 + 0.364171515310935 NA Intergenic Intergenic -164818 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-21 chr9 56089367 56089692 + 0.364171515310935 NA promoter-TSS (NM_011193) promoter-TSS (NM_011193) -447 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-16 chr6 114724311 114724756 + 0.364171515310935 NA intron (NM_001253718, intron 17 of 19) ID_B1|SINE|B4 81436 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-7 chr18 5134529 5134838 + 0.364171515310935 NA Intergenic Intergenic 31048 NR_153824 102637682 Mm.451914 NR_153824 Gm26682 Gm38715 predicted gene, 26682 ncRNA unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-14 chr7 16028180 16028673 + 0.364171515310935 NA Intergenic PB1D7|SINE|Alu -28931 NM_001081418 243842 Mm.440249 NM_001081418 ENSMUSG00000070808 Bicra Gltscr1 BRD4 interacting chromatin remodeling complex associated protein protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-13 chr7 113144890 113145188 + 0.364171515310935 NA Intergenic Intergenic -3024 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-4 chr10 82240938 82241213 + 0.364171515310935 NA intron (NM_001105557, intron 1 of 3) intron (NM_001105557, intron 1 of 3) 200 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-9 chr4 40278889 40279139 + 0.364171515310935 NA intron (NM_001033305, intron 1 of 3) intron (NM_001033305, intron 1 of 3) 407 NM_001033305 230075 Mm.1103 NM_001033305 ENSMUSG00000071014 Ndufb6 CI-B17|Gm137 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935 chr10 76874340 76874529 + 0.364171515310935 NA intron (NM_001347216, intron 2 of 15) intron (NM_001347216, intron 2 of 15) -51622 NR_152849 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-11 chr4 105898537 105898872 + 0.364171515310935 NA Intergenic Intergenic -342509 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-16 chr4 118062400 118062652 + 0.364171515310935 NA intron (NM_001285520, intron 2 of 11) intron (NM_001285520, intron 2 of 11) 72420 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-14 chr8 111718977 111719266 + 0.364171515310935 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 13015 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-3 chr12 69725050 69725287 + 0.364171515310935 NA promoter-TSS (NM_145443) promoter-TSS (NM_145443) 223 NM_001361690 68055 Mm.27844 NM_026536 ENSMUSG00000054894 Atp5s 1110015E18Rik|ATPW ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-7 chr19 5106206 5106418 + 0.364171515310935 NA intron (NM_029576, intron 1 of 5) intron (NM_029576, intron 1 of 5) 684 NM_029576 76308 Mm.182563 NM_029576 ENSMUSG00000024870 Rab1b 1110011F09Rik RAB1B, member RAS oncogene family protein-coding unique_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935 chr15 76331652 76331935 + 0.364171515310935 NA intron (NM_010331, intron 1 of 11) intron (NM_010331, intron 1 of 11) 499 NM_010331 14731 Mm.5903 NM_010331 ENSMUSG00000022561 Gpaa1 C80044|mGAA1 GPI anchor attachment protein 1 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-11 chr7 4690912 4691231 + 0.364171515310935 NA 5' UTR (NM_001168572, exon 1 of 10) 5' UTR (NM_001168572, exon 1 of 10) 143 NM_001168572 381979 Mm.297064 NM_001003920 ENSMUSG00000035390 Brsk1 Gm1100|SAD-B|SADB BR serine/threonine kinase 1 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-7 chr12 35248254 35248704 + 0.364171515310935 NA Intergenic Intergenic -53582 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-13 chr2 181378990 181379508 + 0.364171515310935 NA intron (NM_001048148, intron 3 of 5) intron (NM_001048148, intron 3 of 5) -1986 NM_023684 72699 Mm.440138 NM_023684 ENSMUSG00000090077 Lime1 2810038K19Rik|LIME Lck interacting transmembrane adaptor 1 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-20 chr9 15238694 15239018 + 0.364171515310935 NA promoter-TSS (NM_026955) promoter-TSS (NM_026955) -189 NM_026955 69137 Mm.41396 NM_026955 ENSMUSG00000031937 Vstm5 2200002K05Rik V-set and transmembrane domain containing 5 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-11 chr2 105904778 105905118 + 0.364171515310935 NA promoter-TSS (NM_023876) promoter-TSS (NM_023876) 310 NM_028260 66541 Mm.272253 NM_028260 ENSMUSG00000042670 Immp1l 1500034J20Rik|2610528O17Rik|AU042386 IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-21 chr9 21073742 21074065 + 0.364171515310935 NA promoter-TSS (NM_001039824) promoter-TSS (NM_001039824) -389 NM_001039824 68165 Mm.490294 NM_001039824 ENSMUSG00000079677 Fdx1l B230118G17Rik|Fdx2 ferredoxin 1-like protein-coding unique_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-2 chr3 27858309 27858606 + 0.364171515310935 NA Intergenic Intergenic 37911 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-4 chr13 5724354 5724708 + 0.364171515310935 NA Intergenic Intergenic 133561 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-7 chr17 6165396 6165741 + 0.364171515310935 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 27420 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-16 chr5 113220780 113221141 + 0.364171515310935 NA Intergenic CpG -5949 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935 chr1 164632086 164632393 + 0.364171515310935 NA Intergenic Intergenic 128932 NR_151593 102635083 Mm.98705 NR_151593 ENSMUSG00000097281 Gm26685 - predicted gene, 26685 ncRNA common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-3 chr11 31367794 31368169 + 0.364171515310935 NA intron (NM_011491, intron 1 of 3) intron (NM_011491, intron 1 of 3) 2080 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-17 chr7 67459553 67459835 + 0.364171515310935 NA Intergenic Intergenic -86836 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-6 chr16 31503848 31504143 + 0.364171515310935 NA Intergenic Intergenic -74219 NR_152205 100047123 Mm.466711 NR_152205 Gm15743 - predicted gene 15743 ncRNA unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-15 chr2 27326625 27327077 + 0.364171515310935 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -79548 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-14 chr3 95882561 95882869 + 0.364171515310935 NA promoter-TSS (NM_001033302) promoter-TSS (NM_001033302) -487 NM_001033302 229599 Mm.331218 NM_001033302 ENSMUSG00000038550 Ciart Chrono|Gm129 circadian associated repressor of transcription protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-19 chr8 33987940 33988195 + 0.364171515310935 NA Intergenic Intergenic -58204 NM_001042675 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-19 chr9 6431229 6431490 + 0.364171515310935 NA Intergenic Intergenic -164812 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-7 chr13 97534235 97534517 + 0.364171515310935 NA Intergenic Intergenic -25624 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA unique_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-4 chr6 34749966 34750340 + 0.364171515310935 NA intron (NM_145575, intron 3 of 11) T-rich|Low_complexity|Low_complexity -30279 NM_001289658 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-2 chr10 67714690 67715287 + 0.364171515310935 NA Intergenic Intergenic -143029 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-4 chr17 35780051 35780272 + 0.364171515310935 NA non-coding (NR_045459, exon 3 of 3) non-coding (NR_045459, exon 3 of 3) 7711 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-4 chr14 33312772 33313061 + 0.364171515310935 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 96093 NM_153800 239027 Mm.318350 NM_153800 ENSMUSG00000063506 Arhgap22 B230341L19Rik|RHOGAP2|p68RacGAP Rho GTPase activating protein 22 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-23 chr8 61591495 61591837 + 0.364171515310935 NA promoter-TSS (NM_001293774) promoter-TSS (NM_001293774) -497 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-15 chr5 77369079 77369413 + 0.364171515310935 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 38799 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-2 chr1 134080743 134081019 + 0.364171515310935 NA Intergenic Intergenic -1726 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-19 chr6 83441312 83441566 + 0.364171515310935 NA promoter-TSS (NR_028382) promoter-TSS (NR_028382) 239 NM_183138 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-12 chr5 137083227 137083522 + 0.364171515310935 NA Intergenic Intergenic -11102 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-10 chr5 104046394 104046608 + 0.364171515310935 NA promoter-TSS (NM_028794) promoter-TSS (NM_028794) -363 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-6 chr14 41643663 41643963 + 0.364171515310935 NA Intergenic Intergenic 70602 NM_001358038 666214 NM_001358038 1700049E17Rik1 1700049E17Rik RIKEN cDNA 1700049E17 gene, gene 1 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-8 chr16 8737128 8737453 + 0.364171515310935 NA intron (NM_001003918, intron 1 of 30) intron (NM_001003918, intron 1 of 30) 1052 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-7 chr15 86647714 86647993 + 0.364171515310935 NA Intergenic Intergenic 370178 NM_001358062 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-12 chr2 117883119 117883461 + 0.364171515310935 NA intron (NR_040631, intron 3 of 5) intron (NR_040631, intron 3 of 5) 61362 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-21 chr9 32708273 32708608 + 0.364171515310935 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 12398 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-5 chr14 64689165 64689356 + 0.364171515310935 NA intron (NM_001081177, intron 2 of 39) intron (NM_001081177, intron 2 of 39) 36729 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-18 chr6 140568387 140568715 + 0.364171515310935 NA intron (NM_144920, intron 16 of 30) intron (NM_144920, intron 16 of 30) -54112 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-5 chr11 23254921 23255326 + 0.364171515310935 NA promoter-TSS (NM_134014) promoter-TSS (NM_134014) -918 NM_001035226 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-13 chr9 35341850 35342225 + 0.364171515310935 NA Intergenic Intergenic 60932 NR_040715 71133 Mm.158577 NR_040715 ENSMUSG00000111746 4933422A05Rik - RIKEN cDNA 4933422A05 gene ncRNA common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-8 chr4 89050281 89050480 + 0.364171515310935 NA promoter-TSS (NR_033533) promoter-TSS (NR_033533) 73 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-7 chr2 164609418 164609656 + 0.364171515310935 NA intron (NM_001080550, intron 1 of 7) intron (NM_001080550, intron 1 of 7) 3849 NM_001276432 277343 Mm.383292 NM_001080550 ENSMUSG00000070533 Wfdc8 Gm706 WAP four-disulfide core domain 8 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-9 chr17 7169020 7169274 + 0.364171515310935 NA promoter-TSS (NM_011299) promoter-TSS (NM_011299) -968 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-19 chr7 6728000 6728245 + 0.364171515310935 NA intron (NM_008817, intron 1 of 8) intron (NM_008817, intron 1 of 8) 2297 NM_008817 18616 Mm.389800 NM_008817 ENSMUSG00000002265 Peg3 AL022617|ASF-1|End4|Gcap4|Pw1|Zfp102|mKIAA0287 paternally expressed 3 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-11 chr4 149445670 149445902 + 0.364171515310935 NA Intergenic Intergenic 9182 NM_022020 63954 Mm.46023 NM_022020 ENSMUSG00000028996 Rbp7 1110002J23Rik|CRBP-III retinol binding protein 7, cellular protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-4 chr11 102297426 102297619 + 0.364171515310935 NA promoter-TSS (NM_001098837) promoter-TSS (NM_001098837) -893 NM_001098837 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-15 chr4 127352557 127352782 + 0.364171515310935 NA intron (NM_008127, intron 1 of 1) intron (NM_008127, intron 1 of 1) 1412 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935 chr1 184617564 184618093 + 0.364171515310935 NA Intergenic Intergenic -60137 NR_040472 73590 Mm.82792 NR_040472 ENSMUSG00000101574 1700112H15Rik - RIKEN cDNA 1700112H15 gene ncRNA unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-16 chr8 11172763 11173247 + 0.364171515310935 NA Intergenic Intergenic -139800 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-9 chr2 32632077 32632361 + 0.364171515310935 NA intron (NM_001198791, intron 5 of 6) intron (NM_001198791, intron 5 of 6) 2719 NM_021515 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-18 chr5 136464548 136464829 + 0.364171515310935 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) -88885 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-7 chr12 40446462 40446693 + 0.364171515310935 NA promoter-TSS (NM_172575) promoter-TSS (NM_172575) 524 NM_172803 238130 Mm.341423 NM_172803 ENSMUSG00000035954 Dock4 5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716 dedicator of cytokinesis 4 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-13 chr5 30850981 30851307 + 0.364171515310935 NA intron (NM_133350, intron 1 of 6) intron (NM_133350, intron 1 of 6) -10663 NM_001310516 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-5 chr13 37847178 37847510 + 0.364171515310935 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 19951 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-17 chr4 150724477 150724857 + 0.364171515310935 NA Intergenic Intergenic -72493 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-2 chr10 80226089 80226296 + 0.364171515310935 NA promoter-TSS (NM_023431) promoter-TSS (NM_023431) -406 NM_023431 68114 Mm.273418 NM_023431 ENSMUSG00000020156 Mum1 2610019J09|9430059D04Rik|UBE-1C2 melanoma associated antigen (mutated) 1 protein-coding unique_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-2 chr15 97823362 97823669 + 0.364171515310935 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 8252 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-13 chr2 173046662 173047013 + 0.364171515310935 NA Intergenic Intergenic 24935 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935 chr1 131138969 131139244 + 0.364171515310935 NA promoter-TSS (NM_145508) promoter-TSS (NM_145508) -872 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-10 chr2 9480840 9481258 + 0.364171515310935 NA Intergenic Intergenic 291534 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-11 chr19 21105890 21106193 + 0.364171515310935 NA TTS (NR_126458) TTS (NR_126458) 1331 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-19 chr7 139388423 139388750 + 0.364171515310935 NA promoter-TSS (NM_001127363) promoter-TSS (NM_001127363) -523 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-20 chr8 13907320 13907609 + 0.364171515310935 NA promoter-TSS (NM_001347316) promoter-TSS (NM_001347316) -275 NM_025785 66822 Mm.37950 NM_025785 ENSMUSG00000038365 Fbxo25 9130015I06Rik|AI649137|Fbx25 F-box protein 25 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-5 chr13 4608736 4609052 + 0.364171515310935 NA intron (NM_018859, intron 1 of 9) intron (NM_018859, intron 1 of 9) 270 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-13 chr7 6777295 6777622 + 0.364171515310935 NA intron (NM_001360502, intron 2 of 7) intron (NM_001360502, intron 2 of 7) -26129 NR_037213 100499513 NR_037213 ENSMUSG00000092815 Mir3099 mir-3099|mmu-mir-3099 microRNA 3099 ncRNA common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-8 chr17 44733171 44733589 + 0.364171515310935 NA intron (NR_073392, intron 2 of 7) intron (NR_073392, intron 2 of 7) 2796 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-17 chr4 131696459 131696749 + 0.364171515310935 NA Intergenic Intergenic 141674 NM_011214 19273 Mm.4860 NM_011214 ENSMUSG00000028909 Ptpru Ftp-1|PCP-2|PTP|PTP-lambda|PTPlambda|Pcp2|Ptpf|Ptprl|R-PTP-U|R-PTP-psi|RPTPlambda protein tyrosine phosphatase, receptor type, U protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-9 chr5 72808828 72809075 + 0.364171515310935 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -56174 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935 chr1 71943905 71944282 + 0.364171515310935 NA Intergenic Intergenic 55981 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-14 chr5 113735774 113736053 + 0.364171515310935 NA 5' UTR (NM_001010825, exon 1 of 3) 5' UTR (NM_001010825, exon 1 of 3) 131 NM_001010825 231630 Mm.21926 NM_001010825 ENSMUSG00000053334 Ficd D5Ertd40e|Hype FIC domain containing protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-6 chr15 98677045 98677399 + 0.364171515310935 NA intron (NM_172612, intron 1 of 4) CpG 239 NM_172612 223881 Mm.274010 NM_172612 ENSMUSG00000054855 Rnd1 A830014L09Rik|Arhs Rho family GTPase 1 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-10 chr2 72311307 72311780 + 0.364171515310935 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 25842 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-12 chr8 80880740 80881047 + 0.364171515310935 NA promoter-TSS (NM_001301298) promoter-TSS (NM_001301298) -374 NM_001301298 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-13 chr4 117189715 117189910 + 0.364171515310935 NA Intergenic Intergenic -7188 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-17 chr5 143272556 143272825 + 0.364171515310935 NA Intergenic Intergenic -2668 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-15 chr6 83441297 83441571 + 0.364171515310935 NA promoter-TSS (NR_028382) promoter-TSS (NR_028382) 244 NM_183138 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding unique_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-4 chr9 9289752 9290056 + 0.364171515310935 NA Intergenic Intergenic -50891 NM_027823 71544 Mm.334955 NM_027823 ENSMUSG00000050730 Arhgap42 9030420J04Rik|BE136619 Rho GTPase activating protein 42 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-9 chr19 56460895 56461118 + 0.364171515310935 NA promoter-TSS (NM_001164263) promoter-TSS (NM_001164263) -631 NM_001164263 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-4 chr13 32493592 32493796 + 0.364171515310935 NA Intergenic Intergenic -155150 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-10 chr2 68406317 68406582 + 0.364171515310935 NA intron (NM_016866, intron 2 of 17) intron (NM_016866, intron 2 of 17) 65532 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-21 chr8 91070915 91071191 + 0.364171515310935 NA intron (NM_011250, intron 1 of 21) intron (NM_011250, intron 1 of 21) 996 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 RB transcriptional corepressor like 2 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-20 chr6 106799742 106800037 + 0.364171515310935 NA intron (NM_175357, intron 1 of 10) CpG 198 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-2 chr11 9010401 9010818 + 0.364171515310935 NA exon (NM_001303532, exon 2 of 8) exon (NM_001303532, exon 2 of 8) 582 NM_001303610 15574 Mm.42201 NM_008316 ENSMUSG00000020413 Hus1 - HUS1 checkpoint clamp component protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-6 chr4 45453111 45453332 + 0.364171515310935 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -44455 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-14 chr5 30012289 30012602 + 0.364171515310935 NA promoter-TSS (NM_031168) promoter-TSS (NM_031168) -669 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-10 chr18 10466725 10467155 + 0.364171515310935 NA intron (NM_001083628, intron 4 of 32) intron (NM_001083628, intron 4 of 32) 141761 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-4 chr11 60108873 60109145 + 0.364171515310935 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 3996 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-6 chr14 54876340 54876563 + 0.364171515310935 NA exon (NM_001167908, exon 2 of 2) exon (NM_001167908, exon 2 of 2) 1087 NM_001167908 105651 Mm.297365 NM_001167908 ENSMUSG00000072494 Ppp1r3e A630071A11Rik|AW049239|Gm1211 protein phosphatase 1, regulatory (inhibitor) subunit 3E protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-16 chr5 124578476 124578913 + 0.364171515310935 NA promoter-TSS (NM_181410) promoter-TSS (NM_181410) 437 NM_145371 209354 Mm.28839 NM_145371 ENSMUSG00000029388 Eif2b1 D5Ertd406e|EIF2BA eukaryotic translation initiation factor 2B, subunit 1 (alpha) protein-coding unique_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-5 chr7 112453688 112453957 + 0.364171515310935 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 26116 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-16 chr5 144953027 144953294 + 0.364171515310935 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 12670 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-4 chr12 103684688 103684901 + 0.364171515310935 NA Intergenic Intergenic -8032 NM_001310472 194604 NM_001310472 ENSMUSG00000071179 Serpina16 Gm46 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935 chr1 16217390 16217621 + 0.364171515310935 NA Intergenic Intergenic 111623 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-18 chr7 66569811 66570068 + 0.364171515310935 NA Intergenic Intergenic 119622 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-3 chr11 8452339 8452656 + 0.364171515310935 NA intron (NM_001083587, intron 21 of 30) intron (NM_001083587, intron 21 of 30) 212038 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-14 chr19 31082431 31082719 + 0.364171515310935 NA promoter-TSS (NM_031249) promoter-TSS (NM_031249) -266 NM_031249 83410 Mm.22031 NM_031249 ENSMUSG00000053536 Cstf2t 64kDa|C77975|tCstF-64|tauCstF-64 cleavage stimulation factor, 3' pre-RNA subunit 2, tau protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-8 chr13 111805693 111806044 + 0.364171515310935 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 3125 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-11 chr18 53744315 53744529 + 0.364171515310935 NA intron (NM_178686, intron 1 of 20) CpG-6979 125 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-12 chr4 33261935 33262235 + 0.364171515310935 NA Intergenic Intergenic -13298 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-8 chr3 89270414 89270615 + 0.364171515310935 NA promoter-TSS (NM_009057) promoter-TSS (NM_009057) 56 NM_009057 19729 Mm.17958 NM_009057 ENSMUSG00000027953 Slc50a1 MmSWEET1|Rag1ap1|Rga solute carrier family 50 (sugar transporter), member 1 protein-coding unique_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-3 chr6 119480179 119480470 + 0.364171515310935 NA exon (NM_133940, exon 1 of 1) exon (NM_133940, exon 1 of 1) 656 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-15 chr5 122849593 122849853 + 0.364171515310935 NA promoter-TSS (NM_030564) promoter-TSS (NM_030564) -465 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-5 chr17 56990479 56990799 + 0.364171515310935 NA exon (NM_017393, exon 2 of 6) exon (NM_017393, exon 2 of 6) 375 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-10 chr15 101321120 101321370 + 0.364171515310935 NA Intergenic Intergenic 28033 NR_033803 77717 Mm.391998 NR_033803 ENSMUSG00000075408 6030408B16Rik AI225877 RIKEN cDNA 6030408B16 gene ncRNA common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-3 chr11 44949590 44949848 + 0.364171515310935 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 167209 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-6 chr11 45882996 45883401 + 0.364171515310935 NA intron (NM_001045520, intron 1 of 11) intron (NM_001045520, intron 1 of 11) 31234 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-10 chr4 55651870 55652151 + 0.364171515310935 NA Intergenic Intergenic -119535 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-7 chr4 62208680 62208912 + 0.364171515310935 NA promoter-TSS (NM_001290353) promoter-TSS (NM_001290353) -250 NM_001290350 22696 Mm.5011 NM_009554 ENSMUSG00000028389 Zfp37 Tzn|Zfp-37 zinc finger protein 37 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-20 chr9 55126771 55127211 + 0.364171515310935 NA Intergenic Intergenic -22378 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-3 chr11 86907019 86907396 + 0.364171515310935 NA Intergenic Intergenic 86555 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-15 chr7 43409505 43409706 + 0.364171515310935 NA intron (NM_172900, intron 4 of 11) intron (NM_172900, intron 4 of 11) 1325 NM_172900 243958 Mm.24444 NM_172900 ENSMUSG00000030468 Siglecg 9830164H23|A630096C01Rik|Siglec-G|Siglec10|mSiglec-G sialic acid binding Ig-like lectin G protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-8 chr2 167541639 167541965 + 0.364171515310935 NA intron (NM_011427, intron 2 of 2) intron (NM_011427, intron 2 of 2) 3607 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-10 chr4 63403192 63403450 + 0.364171515310935 NA 5' UTR (NM_001045514, exon 1 of 22) 5' UTR (NM_001045514, exon 1 of 22) 124 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-3 chr10 78169387 78169689 + 0.364171515310935 NA intron (NM_138601, intron 1 of 6) CpG 230 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-21 chr7 118740818 118741099 + 0.364171515310935 NA intron (NM_027815, intron 1 of 30) intron (NM_027815, intron 1 of 30) 687 NM_027815 71517 Mm.213298 NM_027815 ENSMUSG00000030982 9030624J02Rik 2610029J22Rik RIKEN cDNA 9030624J02 gene protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935 chr10 60933917 60934181 + 0.364171515310935 NA intron (NR_033616, intron 1 of 2) intron (NR_033616, intron 1 of 2) 4083 NR_033616 73616 Mm.159038 NR_033616 ENSMUSG00000037247 Pldi 1700125F08Rik|Poldi polymorphic derived intron containing ncRNA unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-9 chr2 29691154 29691465 + 0.364171515310935 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -70219 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding unique_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-3 chr3 123137988 123138242 + 0.364171515310935 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) 98034 NM_080451 118449 Mm.34359 NM_080451 ENSMUSG00000050315 Synpo2 1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo synaptopodin 2 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-16 chr4 130520019 130520284 + 0.364171515310935 NA Intergenic Intergenic 53885 NM_025998 67149 Mm.423029 NM_025998 ENSMUSG00000078532 Nkain1 2610200G18Rik|2810426C15Rik Na+/K+ transporting ATPase interacting 1 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935 chr1 161464541 161464971 + 0.364171515310935 NA Intergenic Intergenic -29901 NM_183391 240873 Mm.276823 NM_183391 ENSMUSG00000066755 Tnfsf18 Gitrl|Tnlg2a tumor necrosis factor (ligand) superfamily, member 18 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-9 chr13 41865230 41865558 + 0.364171515310935 NA promoter-TSS (NR_033545) promoter-TSS (NR_033545) -521 NR_033545 100038577 Mm.387093 NR_033545 ENSMUSG00000113856 Gm10790 - predicted gene 10790 ncRNA common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-4 chr13 24281125 24281323 + 0.364171515310935 NA promoter-TSS (NM_001311122) promoter-TSS (NM_001311122) -434 NM_026825 68732 Mm.211047 NM_026825 ENSMUSG00000021338 Carmil1 1110037D04Rik|AI425970|CARMIL|CARML1|D130057M20|Lrrc16|Lrrc16a capping protein regulator and myosin 1 linker 1 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-18 chr8 105547180 105547453 + 0.364171515310935 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 18748 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-2 chr11 58016203 58016407 + 0.364171515310935 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 7241 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-5 chr13 98006550 98006957 + 0.364171515310935 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 199412 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-12 chr2 13452268 13452611 + 0.364171515310935 NA intron (NM_001081084, intron 17 of 66) intron (NM_001081084, intron 17 of 66) 39437 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935 chr14 27824206 27824460 + 0.364171515310935 NA intron (NM_001347497, intron 4 of 19) intron (NM_001347497, intron 4 of 19) 201926 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding unique_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-2 chr16 8856752 8857182 + 0.364171515310935 NA 3' UTR (NM_001081400, exon 4 of 4) 3' UTR (NM_001081400, exon 4 of 4) 26867 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-18 chr7 98699557 98699815 + 0.364171515310935 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 3242 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-15 chr9 44498944 44499230 + 0.364171515310935 NA promoter-TSS (NM_030256) promoter-TSS (NM_030256) -49 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-12 chr6 113066613 113067025 + 0.364171515310935 NA TTS (NR_027010) TTS (NR_027010) 10425 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-12 chr2 167540735 167540975 + 0.364171515310935 NA intron (NM_011427, intron 2 of 2) intron (NM_011427, intron 2 of 2) 2660 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-2 chr10 79985224 79985440 + 0.364171515310935 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1072 NM_001003949 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-6 chr11 97310874 97311087 + 0.364171515310935 NA Intergenic Intergenic -4736 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-2 chr1 134065017 134065337 + 0.364171515310935 NA Intergenic Intergenic 13978 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-19 chr7 127746540 127746943 + 0.364171515310935 NA promoter-TSS (NM_172748) promoter-TSS (NM_172748) -34 NM_172748 233902 Mm.259353 NM_172748 ENSMUSG00000030811 Fbxl19 6030430O11|BC059812|Fbl19 F-box and leucine-rich repeat protein 19 protein-coding common_peak1_16_17_-0.353039164532616_3.993405419176_0.364171515310935-6 chr13 73328114 73328390 + 0.364171515310935 NA intron (NM_010888, intron 1 of 3) CpG 230 NR_033306 407785 Mm.29897 NM_010888 ENSMUSG00000021606 Ndufs6 BC059730|IP13 NADH dehydrogenase (ubiquinone) Fe-S protein 6 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-22 chr8 25818991 25819199 + 0.364171515310935 NA intron (NM_001359012, intron 14 of 16) intron (NM_001359012, intron 14 of 16) 10621 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-14 chr6 17496840 17497191 + 0.364171515310935 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 33058 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-15 chr4 59683244 59683506 + 0.364171515310935 NA intron (NM_001015681, intron 1 of 3) intron (NM_001015681, intron 1 of 3) 57164 NM_153158 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-3 chr12 95488770 95488999 + 0.364171515310935 NA Intergenic Intergenic -203342 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-3 chr12 80219664 80219974 + 0.364171515310935 NA intron (NM_134156, intron 1 of 20) B1_Mur1|SINE|Alu 40552 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-24 chr8 119862350 119862557 + 0.364171515310935 NA intron (NM_146219, intron 1 of 4) CpG 148 NM_146219 234796 Mm.86446 NM_146219 ENSMUSG00000031828 Klhl36 - kelch-like 36 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-22 chr9 66737107 66737304 + 0.364171515310935 NA intron (NM_178396, intron 2 of 10) intron (NM_178396, intron 2 of 10) 23519 NM_001306148 76459 Mm.277921 NM_178396 ENSMUSG00000032373 Car12 2310047E01Rik|AI314958|CA-XII|Ca12 carbonic anhydrase 12 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-18 chr7 97512197 97512574 + 0.364171515310935 NA intron (NM_001358012, intron 11 of 22) intron (NM_001358012, intron 11 of 22) 31429 NM_001358012 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-5 chr16 13387945 13388263 + 0.364171515310935 NA intron (NM_153588, intron 6 of 14) intron (NM_153588, intron 6 of 14) 29683 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-14 chr3 21985822 21986331 + 0.364171515310935 NA Intergenic Intergenic -90576 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-5 chr11 74555563 74555954 + 0.364171515310935 NA intron (NM_001015046, intron 2 of 24) B3|SINE|B2 34400 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-12 chr19 8995415 8995783 + 0.364171515310935 NA intron (NM_001039959, intron 1 of 5) (GA)n|Simple_repeat|Simple_repeat 6315 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding unique_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935 chr1 52254003 52254438 + 0.364171515310935 NA Intergenic Intergenic -20988 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_19_14_0.142806347363155_3.9782937692901_0.364171515310935-5 chr12 33183235 33183436 + 0.364171515310935 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 35649 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-17 chr6 121088609 121088903 + 0.364171515310935 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -7129 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-2 chr10 93643198 93643482 + 0.364171515310935 NA intron (NM_021320, intron 1 of 9) intron (NM_021320, intron 1 of 9) 2291 NM_021320 57764 Mm.483868 NM_021320 ENSMUSG00000020019 Ntn4 - netrin 4 protein-coding common_peak2_19_14_0.142806347363155_3.9782937692901_0.364171515310935-10 chr18 65670684 65670996 + 0.364171515310935 NA intron (NM_001361052, intron 6 of 8) intron (NM_001361052, intron 6 of 8) -27428 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-8 chr19 28243834 28244037 + 0.364171515310935 NA Intergenic Intergenic -232769 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding unique_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-6 chr9 41545579 41545793 + 0.364171515310935 NA intron (NR_131930, intron 3 of 3) intron (NR_131930, intron 3 of 3) 8970 NR_029726 723965 NR_029726 ENSMUSG00000092770 Mirlet7a-2 Mirnlet7a-2|let-7a-2 microRNA let7a-2 ncRNA unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-8 chr13 13099052 13099475 + 0.364171515310935 NA Intergenic Intergenic -83453 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding common_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-2 chr10 93213521 93213867 + 0.364171515310935 NA intron (NM_146239, intron 3 of 16) intron (NM_146239, intron 3 of 16) 50909 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_20_14_0.212699079984105_4.01324013560057_0.364171515310935-16 chr9 108342039 108342318 + 0.364171515310935 NA Intergenic Intergenic 3098 NM_001329527 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding unique_peak1_20_14_0.212699079984105_4.01324013560057_0.364171515310935-11 chr2 109734128 109734463 + 0.364171515310935 NA Intergenic Intergenic 11374 NM_001285422 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding unique_peak2_16_17_-0.353039164532616_3.993405419176_0.364171515310935-13 chr19 10692024 10692511 + 0.364171515310935 NA intron (NM_001361958, intron 1 of 4) intron (NM_001361958, intron 1 of 4) 3532 NM_001361959 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_71_65_-0.159737850258993_5.96452519422896_0.364097366552605 chr10 80160183 80160757 + 0.364097366552605 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -7369 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-7 chr7 19714717 19715275 + 0.364097366552605 NA exon (NM_016871, exon 2 of 10) exon (NM_016871, exon 2 of 10) 433 NM_001109748 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 protein-coding common_peak1_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-2 chr8 36657357 36658475 + 0.364097366552605 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -43973 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-5 chr4 116053075 116054250 + 0.364097366552605 NA intron (NM_028142, intron 1 of 5) intron (NM_028142, intron 1 of 5) 214 NM_028142 72181 Mm.282560 NM_028142 ENSMUSG00000028706 Nsun4 2310010O12Rik|2810405F18Rik|AI507900|Shtap NOL1/NOP2/Sun domain family, member 4 protein-coding common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-4 chr4 66827689 66828329 + 0.364097366552605 NA intron (NM_021297, intron 1 of 2) intron (NM_021297, intron 1 of 2) 458 NM_021297 21898 Mm.38049 NM_021297 ENSMUSG00000039005 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 protein-coding common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-3 chr2 84544762 84545551 + 0.364097366552605 NA Intergenic Intergenic -38283 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-6 chr5 32610697 32611743 + 0.364097366552605 NA promoter-TSS (NM_001205133) promoter-TSS (NM_001205133) 49 NM_009535 22612 Mm.4558 NM_009535 ENSMUSG00000014932 Yes1 Yes|p61-Yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605 chr12 76546537 76547446 + 0.364097366552605 NA TTS (NR_046044) TTS (NR_046044) 934 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_71_65_-0.159737850258993_5.96452519422896_0.364097366552605-2 chr18 50065731 50066609 + 0.364097366552605 NA intron (NM_134131, intron 1 of 1) intron (NM_134131, intron 1 of 1) -12508 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak2_78_59_0.110677070666758_5.9622291309419_0.364097366552593-4 chr6 34717462 34718223 + 0.364097366552593 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 8398 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_78_59_0.110677070666758_5.9622291309419_0.364097366552593-5 chr8 117283250 117283926 + 0.364097366552593 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 26569 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_78_59_0.110677070666758_5.9622291309419_0.364097366552593-3 chr3 145938055 145939039 + 0.364097366552593 NA non-coding (NR_151445, exon 2 of 4) non-coding (NR_151445, exon 2 of 4) 533 NR_151446 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak1_78_59_0.110677070666758_5.9622291309419_0.364097366552593-3 chr5 115158421 115159424 + 0.364097366552593 NA promoter-TSS (NM_175403) promoter-TSS (NM_175403) -746 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak1_78_59_0.110677070666758_5.9622291309419_0.364097366552593-5 chr9 64022362 64022876 + 0.364097366552593 NA promoter-TSS (NM_008542) promoter-TSS (NM_008542) -560 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_78_59_0.110677070666758_5.9622291309419_0.364097366552593-4 chr6 34717503 34718212 + 0.364097366552593 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 8413 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_78_59_0.110677070666758_5.9622291309419_0.364097366552593 chr16 11066524 11067219 + 0.364097366552593 NA intron (NM_009223, intron 1 of 1) CpG 573 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding common_peak2_78_59_0.110677070666758_5.9622291309419_0.364097366552593-2 chr3 88488686 88489409 + 0.364097366552593 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 4265 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_78_59_0.110677070666758_5.9622291309419_0.364097366552593 chr3 88770942 88771901 + 0.364097366552593 NA intron (NM_018804, intron 1 of 3) intron (NM_018804, intron 1 of 3) 1178 NM_018804 229521 Mm.379376 NM_018804 ENSMUSG00000068923 Syt11 1500004A13Rik|3632445O20Rik|5430404N14Rik|6530420C11Rik|AI851970 synaptotagmin XI protein-coding common_peak1_78_59_0.110677070666758_5.9622291309419_0.364097366552593-2 chr3 152191109 152192601 + 0.364097366552593 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 1990 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak2_175_135_0.0776026022002334_7.12626414235046_0.36408368112289 chr2 180701198 180702576 + 0.36408368112289 NA intron (NM_001291432, intron 1 of 5) CpG 215 NM_011805 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak1_164_144_-0.107296166009784_7.12626100701004_0.36408368112289 chr4 130663399 130665400 + 0.36408368112289 NA intron (NM_001356566, intron 1 of 17) intron (NM_001356566, intron 1 of 17) 1042 NM_001356564 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding common_peak2_175_135_0.0776026022002334_7.12626414235046_0.36408368112289-2 chr6 114967153 114969535 + 0.36408368112289 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 859 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_176_135_0.08571886672655_7.13032227461361_0.36408368112289 chr17 75110624 75111921 + 0.36408368112289 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -67509 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_176_135_0.08571886672655_7.13032227461361_0.36408368112289 chr19 44758846 44760760 + 0.36408368112289 NA intron (NM_011037, intron 1 of 9) intron (NM_011037, intron 1 of 9) 2409 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_107_81_0.107939866708831_6.4115219379725_0.364007861551466 chr17 14338438 14339119 + 0.364007861551466 NA intron (NM_022315, intron 4 of 12) intron (NM_022315, intron 4 of 12) 59272 NM_022315 64074 Mm.30162 NM_022315 ENSMUSG00000023886 Smoc2 1700056C05Rik|5430426J21Rik|Smoc2l SPARC related modular calcium binding 2 protein-coding common_peak2_98_88_-0.134886823914429_6.40829001900918_0.364007861551466 chr1 172205375 172206668 + 0.364007861551466 NA intron (NM_001329871, intron 1 of 3) intron (NM_001329871, intron 1 of 3) 783 NM_001329871 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding common_peak2_98_88_-0.134886823914429_6.40829001900918_0.364007861551466-3 chr5 5513651 5514850 + 0.364007861551466 NA 5' UTR (NM_001193660, exon 2 of 5) 5' UTR (NM_001193660, exon 2 of 5) 539 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding common_peak2_107_81_0.107939866708831_6.4115219379725_0.364007861551466 chr1 58663712 58664611 + 0.364007861551466 NA intron (NM_001347056, intron 10 of 13) intron (NM_001347056, intron 10 of 13) 11520 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak1_107_81_0.107939866708831_6.4115219379725_0.364007861551466-2 chr9 106788178 106789182 + 0.364007861551466 NA intron (NM_030730, intron 1 of 21) intron (NM_030730, intron 1 of 21) 533 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak2_98_88_-0.134886823914429_6.40829001900918_0.364007861551466-2 chr18 36410489 36411410 + 0.364007861551466 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 43546 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_130_115_-0.115918686685181_6.80002165178498_0.363644558008837 chr7 44246000 44247127 + 0.363644558008837 NA promoter-TSS (NM_025880) promoter-TSS (NM_025880) -159 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-8 chr5 24444891 24445490 + 0.363463023472118 NA promoter-TSS (NM_023229) promoter-TSS (NM_023229) 45 NM_023229 66587 Mm.28123 NM_023229 ENSMUSG00000028959 Fastk 0610011K02Rik|610011K02Rik Fas-activated serine/threonine kinase protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-2 chr10 17348355 17348744 + 0.363463023472118 NA Intergenic Intergenic -252767 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-2 chr5 104399672 104400407 + 0.363463023472118 NA Intergenic Intergenic -35072 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_55_41_0.132326691439919_5.45848076849872_0.363463023472118-5 chr7 80186861 80187537 + 0.363463023472118 NA intron (NM_013659, intron 1 of 14) intron (NM_013659, intron 1 of 14) 358 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-7 chr19 5878244 5878705 + 0.363463023472118 NA 5' UTR (NM_134154, exon 1 of 6) 5' UTR (NM_134154, exon 1 of 6) 652 NM_001361974 107375 Mm.5323 NM_134154 ENSMUSG00000024818 Slc25a45 AW491445 solute carrier family 25, member 45 protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-2 chr12 102280659 102281239 + 0.363463023472118 NA Intergenic Intergenic -2125 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-4 chr6 128034307 128035105 + 0.363463023472118 NA intron (NM_001356301, intron 1 of 7) CpG 108872 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak1_55_41_0.132326691439919_5.45848076849872_0.363463023472118-4 chr7 66365186 66365702 + 0.363463023472118 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 16280 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-4 chr17 15497712 15498173 + 0.363463023472118 NA intron (NM_011185, intron 1 of 5) intron (NM_011185, intron 1 of 5) 334 NM_011185 19170 Mm.32912 NM_011185 ENSMUSG00000014769 Psmb1 AA409053|C81484|Lmpc5 proteasome (prosome, macropain) subunit, beta type 1 protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118 chr11 54522903 54523448 + 0.363463023472118 NA intron (NM_001252494, intron 1 of 28) intron (NM_001252494, intron 1 of 28) 330 NM_001252496 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-8 chr4 137495397 137496092 + 0.363463023472118 NA intron (NM_008305, intron 1 of 96) MIRc|SINE|MIR 26941 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_55_41_0.132326691439919_5.45848076849872_0.363463023472118 chr1 6306280 6306740 + 0.363463023472118 NA Intergenic Intergenic -52821 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-5 chr17 70999906 71000475 + 0.363463023472118 NA intron (NM_026064, intron 1 of 3) intron (NM_026064, intron 1 of 3) -2178 NM_001357820 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_49_46_-0.192289989525329_5.45844385691497_0.363463023472118 chr15 80060588 80061103 + 0.363463023472118 NA Intergenic Intergenic 17734 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-6 chr2 128818115 128818780 + 0.363463023472118 NA exon (NM_028248, exon 1 of 19) exon (NM_028248, exon 1 of 19) 144 NM_001355629 72477 Mm.259688 NM_028248 ENSMUSG00000014353 Tmem87b 2610301K12Rik|2810431I02Rik|AU014804 transmembrane protein 87B protein-coding common_peak1_55_41_0.132326691439919_5.45848076849872_0.363463023472118-2 chr13 34652837 34653707 + 0.363463023472118 NA promoter-TSS (NM_025831) promoter-TSS (NM_025831) 349 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 - predicted gene 15908 ncRNA common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-9 chr7 5060374 5060986 + 0.363463023472118 NA 3' UTR (NM_001290432, exon 6 of 6) 3' UTR (NM_001290432, exon 6 of 6) -1463 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-4 chr16 97096034 97096685 + 0.363463023472118 NA intron (NM_031174, intron 1 of 32) intron (NM_031174, intron 1 of 32) 74376 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik DS cell adhesion molecule protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-5 chr17 23546734 23547276 + 0.363463023472118 NA Intergenic CpG -3794 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak1_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-3 chr6 72553065 72553672 + 0.363463023472118 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 3721 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118 chr1 87853323 87853893 + 0.363463023472118 NA non-coding (NR_136921, exon 2 of 2) non-coding (NR_136921, exon 2 of 2) 321 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-3 chr14 54253270 54253842 + 0.363463023472118 NA promoter-TSS (NM_001205181) promoter-TSS (NM_001205181) 373 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-7 chr3 53110207 53110962 + 0.363463023472118 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 69037 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-3 chr12 26340205 26340746 + 0.363463023472118 NA intron (NM_080563, intron 2 of 8) intron (NM_080563, intron 2 of 8) -6235 NR_130981 75243 Mm.444753 NR_130981 ENSMUSG00000114048 4930549C15Rik - RIKEN cDNA 4930549C15 gene ncRNA common_peak2_55_41_0.132326691439919_5.45848076849872_0.363463023472118-6 chr17 63864094 63864876 + 0.363463023472118 NA intron (NM_001037997, intron 1 of 18) CpG 504 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak1_55_41_0.132326691439919_5.45848076849872_0.363463023472118-3 chr4 105364581 105365032 + 0.363463023472118 NA Intergenic Intergenic 207459 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak2_49_46_-0.192289989525329_5.45844385691497_0.363463023472118-9 chrX 167207951 167208955 + 0.363463023472118 NA intron (NM_021278, intron 1 of 2) intron (NM_021278, intron 1 of 2) 765 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4|Tbeta4 thymosin, beta 4, X chromosome protein-coding common_peak2_206_179_-0.0943835696517556_7.4446613115038_0.363437218431006 chr8 70896418 70897828 + 0.363437218431006 NA intron (NM_029751, intron 1 of 4) CpG 320 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding common_peak1_207_179_-0.0874798605942937_7.44811316603253_0.363437218431006 chr17 35241822 35243401 + 0.363437218431006 NA promoter-TSS (NM_001252457) promoter-TSS (NM_001252457) -206 NM_001252457 53817 Mm.439827 NM_019693 ENSMUSG00000019432 Ddx39b 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding common_peak2_99_89_-0.136609213750611_6.42354848945437_0.363270864008465 chr11 3374519 3375397 + 0.363270864008465 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) -3554 NM_173053 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_99_89_-0.136609213750611_6.42354848945437_0.363270864008465-2 chr7 90456507 90457700 + 0.363270864008465 NA 5' UTR (NM_025460, exon 1 of 5) 5' UTR (NM_025460, exon 1 of 5) 105 NM_025460 66271 Mm.28963 NM_025460 ENSMUSG00000030615 Tmem126a 1810020E01Rik transmembrane protein 126A protein-coding common_peak1_108_82_0.103655453781522_6.42686715823769_0.36327086400844-2 chr18 11656967 11657793 + 0.36327086400844 NA promoter-TSS (NR_045526) promoter-TSS (NR_045526) 31 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding common_peak1_108_82_0.103655453781522_6.42686715823769_0.36327086400844 chr14 103098544 103099533 + 0.36327086400844 NA promoter-TSS (NM_001347601) promoter-TSS (NM_001347601) -34 NM_001347601 50789 Mm.214746 NM_015822 ENSMUSG00000022124 Fbxl3 AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68 F-box and leucine-rich repeat protein 3 protein-coding common_peak2_108_82_0.103655453781522_6.42686715823769_0.36327086400844 chr10 80931527 80932837 + 0.36327086400844 NA TTS (NM_008655) TTS (NM_008655) 2091 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_562_439_0.0494300754097026_8.80607475122951_0.363214180990366 chr5 142812962 142817610 + 0.363214180990366 NA 5' UTR (NM_001122730, exon 2 of 28) 5' UTR (NM_001122730, exon 2 of 28) 2101 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak1_167_146_-0.101247607963472_7.14904854085463_0.363192160152054 chr7 89632203 89633729 + 0.363192160152054 NA exon (NM_181407, exon 1 of 14) exon (NM_181407, exon 1 of 14) 148 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-3 chr2 180228890 180229315 + 0.363124929330844 NA Intergenic Intergenic -3243 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-4 chr13 58274266 58274736 + 0.363124929330844 NA promoter-TSS (NM_019832) promoter-TSS (NM_019832) -313 NM_019832 56278 Mm.296625 NM_019832 ENSMUSG00000021552 Gkap1 42kDa|4933400B15Rik|D13Ertd340e|Gkap42 G kinase anchoring protein 1 protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-4 chr17 34899267 34899632 + 0.363124929330844 NA exon (NM_001286573, exon 2 of 26) exon (NM_001286573, exon 2 of 26) 475 NM_145830 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-8 chr6 42691735 42692190 + 0.363124929330844 NA intron (NM_001355769, intron 1 of 8) intron (NM_001355769, intron 1 of 8) 1138 NM_029930 77574 Mm.24652 NM_029930 ENSMUSG00000036667 Tcaf1 2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a TRPM8 channel-associated factor 1 protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-10 chrX 77511209 77511785 + 0.363124929330844 NA intron (NM_020601, intron 1 of 15) CpG 270 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844 chr1 186585598 186586028 + 0.363124929330844 NA Intergenic Intergenic -27132 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-6 chr5 21701595 21701793 + 0.363124929330844 NA promoter-TSS (NM_001359963) promoter-TSS (NM_001359963) -72 NM_001359965 242864 Mm.153292 NM_178728 ENSMUSG00000044968 Napepld A530089G06|Mbldc1|NAPE-PLD N-acyl phosphatidylethanolamine phospholipase D protein-coding unique_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-3 chr8 119687557 119687947 + 0.363124929330844 NA 3' UTR (NM_023395, exon 7 of 7) 3' UTR (NM_023395, exon 7 of 7) -12257 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-10 chr7 100706093 100706552 + 0.363124929330844 NA promoter-TSS (NM_001362169) promoter-TSS (NM_001362169) -313 NM_001362169 319604 Mm.260362 NM_178764 ENSMUSG00000029461 Fam168a 2610030B18Rik|B930006L02Rik|mKIAA0280 family with sequence similarity 168, member A protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-7 chr5 125404907 125405470 + 0.363124929330844 NA Intergenic Intergenic -15171 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-2 chr11 102900420 102900972 + 0.363124929330844 NA Intergenic Intergenic -3496 NM_010277 14580 Mm.1239 NM_010277 ENSMUSG00000020932 Gfap AI836096 glial fibrillary acidic protein protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-12 chr8 94290043 94290510 + 0.363124929330844 NA intron (NM_001357268, intron 3 of 20) intron (NM_001357268, intron 3 of 20) 21670 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_30_30_-0.276691791260848_4.81585041475645_0.363124929330844 chr18 61726544 61727097 + 0.363124929330844 NA promoter-TSS (NM_021296) promoter-TSS (NM_021296) 430 NR_029432 68982 Mm.441992 NR_029432 ENSMUSG00000098702 1500015A07Rik - RIKEN cDNA 1500015A07 gene ncRNA common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-6 chr17 28951995 28952336 + 0.363124929330844 NA promoter-TSS (NM_001356299) promoter-TSS (NM_001356299) -271 NM_001356300 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-5 chr18 61057249 61057656 + 0.363124929330844 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 12302 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-7 chr6 125354275 125354778 + 0.363124929330844 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 4803 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-9 chr6 85347264 85347767 + 0.363124929330844 NA intron (NM_001003955, intron 3 of 5) intron (NM_001003955, intron 3 of 5) -11142 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-2 chr2 30177787 30178328 + 0.363124929330844 NA intron (NM_172660, intron 1 of 11) intron (NM_172660, intron 1 of 11) 402 NM_172660 227695 Mm.4449 NM_172660 ENSMUSG00000039660 Spout1 9930028P05|AL033358|CENP-32|D2Wsu81e SPOUT domain containing methyltransferase 1 protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-9 chr7 141372852 141373445 + 0.363124929330844 NA Intergenic Intergenic -8038 NR_033532 320871 Mm.475463 NM_177280 ENSMUSG00000086844 B230206H07Rik - RIKEN cDNA B230206H07 gene ncRNA common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-8 chr8 11385649 11386218 + 0.363124929330844 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -73107 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-14 chrX 162159068 162159477 + 0.363124929330844 NA exon (NM_001081052, exon 1 of 8) exon (NM_001081052, exon 1 of 8) 169 NM_001081052 195727 Mm.336313 NM_001081052 ENSMUSG00000059493 Nhs Gm389|Gm48|Nhs1|Xcat NHS actin remodeling regulator protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-5 chr17 24527480 24527855 + 0.363124929330844 NA promoter-TSS (NR_045289) promoter-TSS (NR_045289) 271 NM_153792 224619 Mm.275150 NM_153792 ENSMUSG00000052752 Traf7 RFWD1 TNF receptor-associated factor 7 protein-coding unique_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-2 chr3 122131017 122131531 + 0.363124929330844 NA intron (NM_007378, intron 24 of 49) PB1D10|SINE|Alu 86814 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-5 chr4 129336109 129336509 + 0.363124929330844 NA promoter-TSS (NM_009030) promoter-TSS (NM_009030) 283 NM_025970 67106 Mm.36575 NM_025970 ENSMUSG00000057572 Zbtb8os 2010001H09Rik|2310028N13Rik|AI851226|Arch|Archm zinc finger and BTB domain containing 8 opposite strand protein-coding common_peak1_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-5 chr9 88373442 88373824 + 0.363124929330844 NA Intergenic Intergenic 46024 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-2 chr18 67983919 67984304 + 0.363124929330844 NA intron (NM_172631, intron 1 of 5) B3|SINE|B2 50938 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844 chr11 88537582 88538136 + 0.363124929330844 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -81392 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-3 chr14 32073183 32073915 + 0.363124929330844 NA Intergenic Intergenic 11737 NR_104305 105638 Mm.2519 NM_172254 ENSMUSG00000021905 Dph3 DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2 diphthamine biosynthesis 3 protein-coding common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844 chr12 70588680 70589127 + 0.363124929330844 NA intron (NR_037248, intron 4 of 4) intron (NR_037248, intron 4 of 4) 135749 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-8 chr3 97658296 97658645 + 0.363124929330844 NA intron (NM_182997, intron 1 of 7) CpG 258 NM_182997 108097 Mm.31175 NM_182997 ENSMUSG00000038205 Prkab2 5730553K21Rik|AW049591|BB124140 protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-3 chr4 32304890 32305330 + 0.363124929330844 NA Intergenic Intergenic -112325 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-4 chr7 142362758 142363100 + 0.363124929330844 NA intron (NM_001347541, intron 2 of 2) intron (NM_001347541, intron 2 of 2) 9330 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-2 chr10 79936439 79936874 + 0.363124929330844 NA intron (NM_001288625, intron 3 of 8) intron (NM_001288625, intron 3 of 8) 9315 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844 chr1 132207178 132207828 + 0.363124929330844 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) 9415 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-13 chr9 13497986 13498461 + 0.363124929330844 NA Intergenic Intergenic 66862 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-3 chr10 116271340 116271858 + 0.363124929330844 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -29775 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-6 chr5 113888997 113889399 + 0.363124929330844 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 19508 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-7 chr2 29711244 29711870 + 0.363124929330844 NA intron (NM_001039086, intron 11 of 25) intron (NM_001039086, intron 11 of 25) -49971 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding unique_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-4 chr9 69467077 69467646 + 0.363124929330844 NA exon (NM_007585, exon 3 of 13) exon (NM_007585, exon 3 of 13) 10417 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA unique_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844 chr14 43329136 43329586 + 0.363124929330844 NA Intergenic Intergenic 18450 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_31_30_-0.231211245742323_4.83859068751571_0.363124929330844-4 chr4 105937378 105937652 + 0.363124929330844 NA Intergenic Intergenic -303698 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak2_30_30_-0.276691791260848_4.81585041475645_0.363124929330844-11 chr8 73197599 73197963 + 0.363124929330844 NA intron (NM_001317391, intron 3 of 15) intron (NM_001317391, intron 3 of 15) 155759 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838-3 chr8 47674918 47675143 + 0.363124929330838 NA 5' UTR (NM_023503, exon 1 of 2) 5' UTR (NM_023503, exon 1 of 2) 129 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-5 chr17 27856601 27857018 + 0.363124929330838 NA intron (NM_001080769, intron 1 of 20) CpG 302 NM_001080769 224648 Mm.291291 NM_001080769 ENSMUSG00000039512 Uhrf1bp1 1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127 UHRF1 (ICBP90) binding protein 1 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-2 chr15 41716367 41716746 + 0.363124929330838 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -72439 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838-4 chr8 73232768 73233305 + 0.363124929330838 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 120504 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838 chr13 38634755 38635125 + 0.363124929330838 NA exon (NM_139063, exon 1 of 5) exon (NM_139063, exon 1 of 5) 169 NM_139063 17828 Mm.261554 NM_139063 ENSMUSG00000038982 Bloc1s5 1810074A19Rik|Muted|mu biogenesis of lysosomal organelles complex-1, subunit 5, muted protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-10 chr6 113481544 113481944 + 0.363124929330838 NA intron (NM_178942, intron 16 of 17) intron (NM_178942, intron 16 of 17) -1612 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-3 chr15 83447552 83447975 + 0.363124929330838 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 117 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding unique_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838 chr11 51945789 51946377 + 0.363124929330838 NA Intergenic Intergenic -21548 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838-2 chr19 28675121 28675602 + 0.363124929330838 NA intron (NM_175459, intron 1 of 10) intron (NM_175459, intron 1 of 10) -2863 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838-2 chr17 56289671 56290362 + 0.363124929330838 NA intron (NM_025836, intron 1 of 7) intron (NM_025836, intron 1 of 7) 495 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding common_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838-6 chrX 6408998 6409722 + 0.363124929330838 NA intron (NM_001040459, intron 1 of 8) intron (NM_001040459, intron 1 of 8) -6382 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-4 chr15 97839807 97840140 + 0.363124929330838 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 4529 NM_001204279 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-7 chr2 164785239 164785697 + 0.363124929330838 NA promoter-TSS (NM_133924) promoter-TSS (NM_133924) -553 NM_133924 101113 Mm.295647 NM_133924 ENSMUSG00000050373 Snx21 5730407K14Rik|AI481716 sorting nexin family member 21 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838 chr11 83935732 83936122 + 0.363124929330838 NA Intergenic Intergenic -6163 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-8 chr2 173662834 173663246 + 0.363124929330838 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 3195 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_35_26_0.136823746509236_4.82329937541809_0.363124929330838-5 chr8 106622874 106623438 + 0.363124929330838 NA intron (NM_009864, intron 2 of 15) intron (NM_009864, intron 2 of 15) 19806 NM_009864 12550 Mm.35605 NM_009864 ENSMUSG00000000303 Cdh1 AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um cadherin 1 protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-9 chr3 61343394 61343908 + 0.363124929330838 NA Intergenic Intergenic -20856 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_35_26_0.136823746509236_4.82329937541809_0.363124929330838-6 chr18 60755768 60756116 + 0.363124929330838 NA Intergenic Intergenic -7277 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_80_60_0.122645115564727_5.99205989534525_0.363095533294599 chr10 86218561 86219575 + 0.363095533294599 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -81344 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_80_60_0.122645115564727_5.99205989534525_0.363095533294599-3 chr3 65974033 65974806 + 0.363095533294599 NA Intergenic Intergenic -16170 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_80_60_0.122645115564727_5.99205989534525_0.363095533294599 chr2 6322823 6323683 + 0.363095533294599 NA intron (NM_001080548, intron 1 of 14) CpG 496 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_79_60_0.104849646262299_5.98316216069404_0.363095533294599 chr3 104817566 104818404 + 0.363095533294599 NA exon (NM_008619, exon 1 of 20) exon (NM_008619, exon 1 of 20) 320 NM_008619 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak2_80_60_0.122645115564727_5.99205989534525_0.363095533294599-2 chr15 77914175 77915336 + 0.363095533294599 NA TTS (NM_019913) TTS (NM_019913) 14239 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_80_60_0.122645115564727_5.99205989534525_0.363095533294599-4 chr8 61589831 61590451 + 0.363095533294599 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 1028 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_80_60_0.122645115564727_5.99205989534525_0.363095533294599-2 chr7 125444350 125445229 + 0.363095533294599 NA 5' UTR (NM_029842, exon 1 of 8) 5' UTR (NM_029842, exon 1 of 8) 169 NM_029842 77035 Mm.307239 NM_029842 ENSMUSG00000030752 Kdm8 3110005O21Rik|Jmjd5 lysine (K)-specific demethylase 8 protein-coding common_peak2_72_66_-0.161673754891845_5.98525231301185_0.363095533294587 chr10 81266230 81267009 + 0.363095533294587 NA intron (NM_025317, intron 1 of 2) CpG 307 NM_025317 66047 Mm.43397 NM_025317 ENSMUSG00000034932 Mrpl54 0610008M19Rik|D10Sut1e mitochondrial ribosomal protein L54 protein-coding common_peak2_72_66_-0.161673754891845_5.98525231301185_0.363095533294587-3 chr19 41847902 41848508 + 0.363095533294587 NA promoter-TSS (NM_177603) promoter-TSS (NM_177603) -73 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak1_72_66_-0.161673754891845_5.98525231301185_0.363095533294587 chr14 8080363 8081061 + 0.363095533294587 NA intron (NM_025938, intron 1 of 5) intron (NM_025938, intron 1 of 5) 399 NM_025938 67053 Mm.210048 NM_025938 ENSMUSG00000023156 Rpp14 2610511E03Rik|AA682089 ribonuclease P 14 subunit protein-coding common_peak1_72_66_-0.161673754891845_5.98525231301185_0.363095533294587-2 chr7 16816371 16817329 + 0.363095533294587 NA promoter-TSS (NM_173430) promoter-TSS (NM_173430) -118 NM_173430 243853 Mm.39703 NM_173430 ENSMUSG00000048920 Fkrp A830029B19Rik|AI842067|AI847300|LGMD1I|MDC1C fukutin related protein protein-coding common_peak2_72_66_-0.161673754891845_5.98525231301185_0.363095533294587-4 chr7 19603951 19604375 + 0.363095533294587 NA intron (NR_125834, intron 1 of 19) CpG 198 NR_125835 53609 Mm.20913 NM_016680 ENSMUSG00000061028 Clasrp Clasp|Sfrs16|Srsf16|Swap2 CLK4-associating serine/arginine rich protein protein-coding common_peak2_72_66_-0.161673754891845_5.98525231301185_0.363095533294587-2 chr11 55468307 55469160 + 0.363095533294587 NA Intergenic Intergenic -1019 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak2_131_116_-0.117408694332135_6.81166037241734_0.363085260456436 chr11 6415889 6417081 + 0.363085260456436 NA intron (NM_008907, intron 1 of 4) intron (NM_008907, intron 1 of 4) 615 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak1_141_108_0.089381437356562_6.81287504345521_0.363085260456411-2 chr18 35829718 35830932 + 0.363085260456411 NA promoter-TSS (NM_001357458) promoter-TSS (NM_001357458) 11 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_141_108_0.089381437356562_6.81287504345521_0.363085260456411 chr13 90922994 90924175 + 0.363085260456411 NA intron (NM_024175, intron 1 of 3) CpG 462 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak1_141_108_0.089381437356562_6.81287504345521_0.363085260456411 chr10 115385024 115385961 + 0.363085260456411 NA exon (NM_001033261, exon 1 of 35) exon (NM_001033261, exon 1 of 35) 533 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding common_peak1_209_181_-0.0897130045719265_7.46293813791273_0.362727853464008 chr7 118490950 118492451 + 0.362727853464008 NA 5' UTR (NM_001033380, exon 1 of 1) 5' UTR (NM_001033380, exon 1 of 1) 275 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak1_109_83_0.0994598989989335_6.44204737227823_0.362550921004498 chr17 46890687 46891893 + 0.362550921004498 NA exon (NM_178385, exon 1 of 1) exon (NM_178385, exon 1 of 1) 669 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak1_100_90_-0.138296740941283_6.43864626972806_0.362550921004473-2 chr7 27487041 27487883 + 0.362550921004473 NA intron (NM_018820, intron 1 of 1) CpG 509 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak1_100_90_-0.138296740941283_6.43864626972806_0.362550921004473 chr11 106216435 106217513 + 0.362550921004473 NA promoter-TSS (NM_026009) promoter-TSS (NM_026009) 48 NM_028074 72047 Mm.41367 NM_028074 ENSMUSG00000020705 Ddx42 1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 protein-coding common_peak1_101_90_-0.124183160208035_6.44570306009468_0.362550921004473 chr7 118242739 118243630 + 0.362550921004473 NA promoter-TSS (NR_027879) promoter-TSS (NR_027879) 453 NM_001031814 233789 Mm.309053 NM_177180 ENSMUSG00000030655 Smg1 2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) protein-coding common_peak1_142_109_0.0862588397364732_6.8244891333929_0.362535868239963 chr5 125243999 125245776 + 0.362535868239963 NA Intergenic Intergenic -65673 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_180_139_0.0759115731131601_7.16723880350155_0.362325502343627 chr12 8810964 8812661 + 0.362325502343627 NA Intergenic Intergenic 40416 NM_011519 20969 Mm.2580 NM_011519 ENSMUSG00000020592 Sdc1 AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1 syndecan 1 protein-coding common_peak1_180_139_0.0759115731131601_7.16723880350155_0.362325502343627 chr1 10037409 10038826 + 0.362325502343627 NA promoter-TSS (NM_026493) promoter-TSS (NM_026493) 42 NR_102282 26754 Mm.402384 NM_013715 ENSMUSG00000025917 Cops5 AI303502|CSN5|Jab1|Mov34|Sgn5 COP9 signalosome subunit 5 protein-coding common_peak1_81_61_0.116763257213563_6.01257793899366_0.362125042338591-2 chr17 55944965 55945830 + 0.362125042338591 NA promoter-TSS (NM_146249) promoter-TSS (NM_146249) -138 NM_146249 240120 Mm.441018 NM_146249 ENSMUSG00000062101 Zfp119b - zinc finger protein 119b protein-coding common_peak1_81_61_0.116763257213563_6.01257793899366_0.362125042338591-3 chr3 93520471 93521029 + 0.362125042338591 NA intron (NM_016740, intron 1 of 2) intron (NM_016740, intron 1 of 2) 254 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak1_81_61_0.116763257213563_6.01257793899366_0.362125042338591 chr1 177795718 177796440 + 0.362125042338591 NA intron (NM_007422, intron 1 of 12) CpG 430 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak2_73_67_-0.163557079766141_6.00568430136727_0.362125042338579 chr19 28676386 28677382 + 0.362125042338579 NA intron (NM_175459, intron 1 of 10) intron (NM_175459, intron 1 of 10) -1340 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_73_67_-0.163557079766141_6.00568430136727_0.362125042338579 chr13 104467254 104468016 + 0.362125042338579 NA intron (NR_136938, intron 23 of 26) intron (NR_136938, intron 23 of 26) 179800 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_56_42_0.123734302070504_5.48813190573735_0.362058538051628-2 chr1 160906440 160907091 + 0.362058538051628 NA intron (NM_001024952, intron 1 of 19) CpG 354 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak2_56_42_0.123734302070504_5.48813190573735_0.362058538051628 chr1 178187726 178188337 + 0.362058538051628 NA intron (NM_024282, intron 1 of 4) CpG 614 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding common_peak1_56_42_0.123734302070504_5.48813190573735_0.362058538051628 chr1 91802025 91802841 + 0.362058538051628 NA intron (NM_007855, intron 1 of 1) CpG 972 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak1_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-3 chr12 102270452 102271409 + 0.362058538051628 NA Intergenic Intergenic -12144 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_56_42_0.123734302070504_5.48813190573735_0.362058538051628-3 chr10 68136790 68137464 + 0.362058538051628 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 141599 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_56_42_0.123734302070504_5.48813190573735_0.362058538051628-5 chr8 128663812 128664172 + 0.362058538051628 NA Intergenic Intergenic -21662 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-5 chr5 121451956 121452455 + 0.362058538051628 NA promoter-TSS (NM_029912) promoter-TSS (NM_029912) 269 NM_026129 67397 Mm.154570 NM_026129 ENSMUSG00000029616 Erp29 1200015M03Rik|2810446M09Rik|AW209030|Erp28|Erp31|PDI-Db endoplasmic reticulum protein 29 protein-coding common_peak2_50_47_-0.19429604115725_5.48781448014253_0.362058538051628 chr1 170214997 170215385 + 0.362058538051628 NA promoter-TSS (NM_001360809) promoter-TSS (NM_001360809) 216 NM_010633 16589 Mm.209150 NM_010633 ENSMUSG00000026667 Uhmk1 4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|C820018A03Rik|KIS|Kist|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding common_peak1_56_42_0.123734302070504_5.48813190573735_0.362058538051628-3 chr15 38469160 38469759 + 0.362058538051628 NA Intergenic Intergenic 21088 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_56_42_0.123734302070504_5.48813190573735_0.362058538051628-6 chr9 66126538 66127534 + 0.362058538051628 NA intron (NM_001359210, intron 1 of 3) intron (NM_001359210, intron 1 of 3) 425 NM_026635 68250 Mm.27107 NM_026635 ENSMUSG00000032381 Fam96a 5730536A07Rik family with sequence similarity 96, member A protein-coding common_peak1_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-2 chr10 12922278 12923047 + 0.362058538051628 NA non-coding (NR_038027, exon 1 of 4) non-coding (NR_038027, exon 1 of 4) 465 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak2_56_42_0.123734302070504_5.48813190573735_0.362058538051628-2 chr10 17721642 17722276 + 0.362058538051628 NA Intergenic Intergenic -1269 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-2 chr11 40754848 40755184 + 0.362058538051628 NA 5' UTR (NM_009831, exon 1 of 6) 5' UTR (NM_009831, exon 1 of 6) 270 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding common_peak2_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-4 chr4 64086456 64087406 + 0.362058538051628 NA Intergenic Intergenic -39916 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_50_47_-0.19429604115725_5.48781448014253_0.362058538051628 chr1 66700953 66701525 + 0.362058538051628 NA intron (NM_025683, intron 1 of 5) CpG 408 NM_001310644 66646 Mm.240912 NM_025683 ENSMUSG00000026005 Rpe 2810429B02Rik|5730518J08Rik ribulose-5-phosphate-3-epimerase protein-coding common_peak2_56_42_0.123734302070504_5.48813190573735_0.362058538051628-4 chr2 3332089 3332555 + 0.362058538051628 NA intron (NM_001013376, intron 1 of 1) CpG 306 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding common_peak1_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-4 chr17 31511807 31512221 + 0.362058538051628 NA intron (NM_021322, intron 1 of 10) CpG 473 NM_021322 57773 Mm.143771 NM_021322 ENSMUSG00000024037 Wdr4 AI415180|AI448349|D530049K22Rik|Wh WD repeat domain 4 protein-coding common_peak1_56_42_0.123734302070504_5.48813190573735_0.362058538051628-4 chr18 46525315 46525814 + 0.362058538051628 NA intron (NM_173423, intron 1 of 2) C-rich|Low_complexity|Low_complexity 407 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak1_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-5 chr2 60881737 60882624 + 0.362058538051628 NA promoter-TSS (NM_001141931) promoter-TSS (NM_001141931) -742 NM_001141931 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-6 chr2 72365818 72366469 + 0.362058538051628 NA intron (NM_023057, intron 4 of 19) intron (NM_023057, intron 4 of 19) 80442 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_50_47_-0.19429604115725_5.48781448014253_0.362058538051628-3 chr19 6076777 6077200 + 0.362058538051628 NA exon (NM_001081041, exon 1 of 10) exon (NM_001081041, exon 1 of 10) 199 NM_001081041 68505 Mm.227361 NM_001081041 ENSMUSG00000024799 Vps51 1110014N23Rik|3110057M17Rik|AI837850|Ffr VPS51 GARP complex subunit protein-coding common_peak1_211_183_-0.0919018599336416_7.47761102609019_0.362034435647991 chr4 46451177 46453113 + 0.362034435647991 NA intron (NM_130889, intron 1 of 6) CpG 1219 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding common_peak1_271_210_0.0675667299095331_7.75488255366195_0.361999066097163 chr8 26118388 26120218 + 0.361999066097163 NA promoter-TSS (NM_207659) promoter-TSS (NM_207659) -65 NM_001357292 77733 Mm.291906 NM_029965 ENSMUSG00000013878 Rnf170 6720407G21Rik|AI481227 ring finger protein 170 protein-coding common_peak2_143_110_0.0831854231761104_6.83600857793816_0.361996120475765 chr15 13244054 13245846 + 0.361996120475765 NA Intergenic Intergenic -71275 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_143_110_0.0831854231761104_6.83600857793816_0.361996120475765-2 chr4 109475684 109477099 + 0.361996120475765 NA 5' UTR (NM_013876, exon 1 of 3) 5' UTR (NM_013876, exon 1 of 3) 114 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding common_peak1_143_110_0.0831854231761104_6.83600857793816_0.361996120475765 chr9 56506178 56507257 + 0.361996120475765 NA Intergenic Intergenic 88098 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_110_84_0.0953504275739512_6.45706614992468_0.361847447176661-2 chr15 81959808 81960825 + 0.361847447176661 NA intron (NM_001282041, intron 1 of 5) CpG 614 NM_001282040 29858 Mm.18939 NM_013872 ENSMUSG00000022474 Pmm1 C77612 phosphomannomutase 1 protein-coding common_peak1_102_91_-0.125974590998786_6.46057466055762_0.361847447176661 chr18 46741613 46742499 + 0.361847447176661 NA promoter-TSS (NM_026217) promoter-TSS (NM_026217) 180 NM_009681 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding common_peak1_110_84_0.0953504275739512_6.45706614992468_0.361847447176661-2 chr7 30957089 30958242 + 0.361847447176661 NA promoter-TSS (NM_011680) promoter-TSS (NM_011680) -862 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding common_peak1_110_84_0.0953504275739512_6.45706614992468_0.361847447176661 chr15 62119526 62120405 + 0.361847447176661 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 80708 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_110_84_0.0953504275739512_6.45706614992468_0.361847447176661 chr14 14120045 14120920 + 0.361847447176661 NA intron (NM_025550, intron 1 of 7) CpG 422 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak2_272_211_0.0660024125470109_7.7609216608367_0.361717393015631 chr5 92855921 92858465 + 0.361717393015631 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -40800 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_135_119_-0.111169697418555_6.85130574689924_0.361465765363393 chr11 78511721 78512892 + 0.361465765363393 NA promoter-TSS (NM_026389) promoter-TSS (NM_026389) 10 NM_026389 67811 Mm.197493 NM_026389 ENSMUSG00000001100 Poldip2 1300003F06Rik|Pdip38 polymerase (DNA-directed), delta interacting protein 2 protein-coding common_peak1_135_119_-0.111169697418555_6.85130574689924_0.361465765363393-2 chr3 37875477 37876811 + 0.361465765363393 NA Intergenic Intergenic -22669 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_145_111_0.0900055339350789_6.85235768902514_0.361465765363393 chr9 108306404 108307101 + 0.361465765363393 NA promoter-TSS (NM_001313961) promoter-TSS (NM_001313961) -45 NM_001313961 11848 Mm.757 NM_016802 ENSMUSG00000007815 Rhoa Arha|Arha1|Arha2 ras homolog family member A protein-coding common_peak1_135_119_-0.111169697418555_6.85130574689924_0.361465765363393-3 chr9 43105294 43107039 + 0.361465765363393 NA promoter-TSS (NM_027144) promoter-TSS (NM_027144) -448 NM_027144 69632 Mm.275266 NM_027144 ENSMUSG00000059495 Arhgef12 2310014B11Rik|AU019857|Larg|mKIAA0382 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding common_peak2_310_265_-0.0746723714938025_8.01794624975429_0.361400652311641 chr3 88493873 88496324 + 0.361400652311641 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) -1786 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_74_68_-0.165389992398406_6.02582946057897_0.3611844450086 chr13 54686868 54687671 + 0.3611844450086 NA intron (NR_027396, intron 1 of 10) CpG 539 NM_001146025 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_75_68_-0.146415981806267_6.03531646587504_0.3611844450086-2 chr8 31821855 31822502 + 0.3611844450086 NA intron (NM_178591, intron 7 of 8) intron (NM_178591, intron 7 of 8) 96025 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak2_74_68_-0.165389992398406_6.02582946057897_0.3611844450086-2 chr4 148526175 148526993 + 0.3611844450086 NA intron (NM_020009, intron 34 of 57) intron (NM_020009, intron 34 of 57) -26122 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak1_75_68_-0.146415981806267_6.03531646587504_0.3611844450086 chr6 127329077 127330159 + 0.3611844450086 NA Intergenic Intergenic -21651 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_75_68_-0.146415981806267_6.03531646587504_0.3611844450086 chr2 163418506 163419492 + 0.3611844450086 NA promoter-TSS (NR_151490) promoter-TSS (NR_151490) 471 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding common_peak1_74_68_-0.165389992398406_6.02582946057897_0.3611844450086-2 chr7 5020513 5021354 + 0.3611844450086 NA intron (NM_001033383, intron 1 of 2) intron (NM_001033383, intron 1 of 2) 557 NM_001033383 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding common_peak1_74_68_-0.165389992398406_6.02582946057897_0.3611844450086 chr13 55189497 55190269 + 0.3611844450086 NA Intergenic Intergenic -19899 NM_008739 18193 Mm.168965 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak1_82_62_0.111043697391001_6.03280177219542_0.361184445008588 chr9 22003021 22003860 + 0.361184445008588 NA promoter-TSS (NM_029939) promoter-TSS (NM_029939) 452 NM_001293650 19089 Mm.214593 NM_008925 ENSMUSG00000003402 Prkcsh 80K-H|PKCSH protein kinase C substrate 80K-H protein-coding common_peak2_82_62_0.111043697391001_6.03280177219542_0.361184445008588 chr16 30510770 30511735 + 0.361184445008588 NA TTS (NM_172614) TTS (NM_172614) 39326 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak2_111_85_0.0913243799433383_6.47192694467377_0.361159883654861 chr10 127266295 127267033 + 0.361159883654861 NA intron (NM_027151, intron 1 of 13) CpG 402 NM_001190453 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding common_peak2_184_142_0.0766363438864426_7.19818950872161_0.361069905118945 chr2 167690469 167692466 + 0.361069905118945 NA intron (NR_015500, intron 1 of 1) intron (NR_015500, intron 1 of 1) 290 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-2 chr12 27921029 27921474 + 0.360980258679647 NA Intergenic Intergenic -578533 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-7 chr2 32630619 32631100 + 0.360980258679647 NA intron (NM_001198791, intron 4 of 6) intron (NM_001198791, intron 4 of 6) 1359 NM_021515 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-10 chr4 65289531 65290194 + 0.360980258679647 NA intron (NM_021362, intron 10 of 21) intron (NM_021362, intron 10 of 21) 165688 NM_021362 18491 Mm.317854 NM_021362 ENSMUSG00000028370 Pappa 8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A pregnancy-associated plasma protein A protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-14 chr8 11557593 11557871 + 0.360980258679647 NA promoter-TSS (NM_001302459) promoter-TSS (NM_001302459) -678 NM_001302459 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-4 chr13 5867094 5867616 + 0.360980258679647 NA 3' UTR (NM_011803, exon 4 of 4) 3' UTR (NM_011803, exon 4 of 4) 5866 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-15 chr9 49534102 49534682 + 0.360980258679647 NA intron (NM_010875, intron 13 of 15) intron (NM_010875, intron 13 of 15) 16104 NR_029465 100036537 Mm.437541 NR_029465 ENSMUSG00000079564 Gm11149 - predicted gene 11149 ncRNA common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-10 chr3 144203292 144203707 + 0.360980258679647 NA intron (NM_010723, intron 1 of 4) intron (NM_010723, intron 1 of 4) -1103 NM_001161769 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647 chr11 97420690 97421183 + 0.360980258679647 NA Intergenic Intergenic -29224 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647 chr1 61638683 61639349 + 0.360980258679647 NA 5' UTR (NM_001081050, exon 1 of 23) 5' UTR (NM_001081050, exon 1 of 23) 192 NM_001081050 72823 Mm.35153 NM_001081050 ENSMUSG00000052062 Pard3b 1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-5 chr18 21001268 21001543 + 0.360980258679647 NA promoter-TSS (NM_001303011) promoter-TSS (NM_001303011) 105 NM_001303005 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-9 chr2 117729720 117730311 + 0.360980258679647 NA Intergenic Intergenic 82787 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-13 chr6 53573493 53574159 + 0.360980258679647 NA intron (NM_172728, intron 1 of 6) intron (NM_172728, intron 1 of 6) 452 NM_172728 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-11 chr5 45493617 45493897 + 0.360980258679647 NA intron (NM_024434, intron 1 of 12) CpG 383 NM_024434 66988 Mm.286830 NM_024434 ENSMUSG00000039682 Lap3 2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps leucine aminopeptidase 3 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-8 chr3 83841194 83841506 + 0.360980258679647 NA intron (NM_011905, intron 1 of 2) intron (NM_011905, intron 1 of 2) 258 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding unique_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-4 chr7 40065109 40065914 + 0.360980258679647 NA Intergenic Intergenic 547745 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-5 chr19 5748700 5749249 + 0.360980258679647 NA intron (NM_008520, intron 12 of 27) intron (NM_008520, intron 12 of 27) 8070 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-15 chr8 60648594 60648956 + 0.360980258679647 NA intron (NM_001293769, intron 1 of 1) intron (NM_001293769, intron 1 of 1) -6329 NM_001177881 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-3 chr10 99172653 99173216 + 0.360980258679647 NA intron (NR_153333, intron 11 of 12) intron (NR_153333, intron 11 of 12) 64799 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 polypeptide N-acetylgalactosaminyltransferase 4 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-2 chr10 94035367 94035815 + 0.360980258679647 NA promoter-TSS (NM_053072) promoter-TSS (NM_053072) 151 NM_001304720 215008 Mm.124177 NM_172538 ENSMUSG00000036099 Vezt A630071D13Rik|AI848282 vezatin, adherens junctions transmembrane protein protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-2 chr15 66899347 66899689 + 0.360980258679647 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 8125 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-11 chr5 23616137 23616826 + 0.360980258679647 NA promoter-TSS (NM_009274) promoter-TSS (NM_009274) 90 NM_001359175 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding unique_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647-3 chr12 54695507 54695839 + 0.360980258679647 NA intron (NM_025456, intron 1 of 5) CpG 221 NM_001331162 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-7 chr3 8923222 8923675 + 0.360980258679647 NA intron (NM_025434, intron 1 of 2) intron (NM_025434, intron 1 of 2) 409 NM_025434 66230 Mm.38460 NM_025434 ENSMUSG00000040269 Mrps28 1500012D08Rik|AW061224 mitochondrial ribosomal protein S28 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-12 chr6 43665765 43666076 + 0.360980258679647 NA intron (NM_013861, intron 1 of 8) intron (NM_013861, intron 1 of 8) 358 NM_013861 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-14 chr9 71287911 71288372 + 0.360980258679647 NA intron (NM_009022, intron 12 of 13) intron (NM_009022, intron 12 of 13) 72352 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-9 chr4 84204063 84204619 + 0.360980258679647 NA Intergenic Intergenic -159462 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-4 chr18 77714152 77714494 + 0.360980258679647 NA promoter-TSS (NM_178670) promoter-TSS (NM_178670) 139 NR_027978 67640 Mm.482903 NM_026289 4930465K10Rik - RIKEN cDNA 4930465K10 gene ncRNA common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-11 chr4 119095807 119096185 + 0.360980258679647 NA Intergenic Intergenic -12749 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-3 chr17 46277149 46277721 + 0.360980258679647 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 5591 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-8 chr17 66365308 66365648 + 0.360980258679647 NA intron (NM_172963, intron 8 of 13) intron (NM_172963, intron 8 of 13) 84272 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-4 chr16 23316903 23317289 + 0.360980258679647 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 26626 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding unique_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647 chr13 74494187 74494676 + 0.360980258679647 NA promoter-TSS (NM_146231) promoter-TSS (NM_146231) -481 NM_146231 235956 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647 chr12 27508240 27508682 + 0.360980258679647 NA Intergenic Intergenic -165743 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-6 chr15 53139141 53139531 + 0.360980258679647 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 206847 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647-4 chr4 127077524 127077990 + 0.360980258679647 NA non-coding (NR_104366, exon 1 of 16) non-coding (NR_104366, exon 1 of 16) 374 NM_001285887 100177 Mm.276096 NM_177462 ENSMUSG00000042408 Zmym6 9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258 zinc finger, MYM-type 6 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-10 chr4 125123698 125124118 + 0.360980258679647 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 3973 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647 chr1 157380127 157380721 + 0.360980258679647 NA intron (NM_177644, intron 1 of 17) intron (NM_177644, intron 1 of 17) -31928 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647 chr12 28649703 28650402 + 0.360980258679647 NA intron (NM_001286865, intron 1 of 7) intron (NM_001286865, intron 1 of 7) 450 NM_001286865 19819 Mm.10152 NM_011275 ENSMUSG00000020630 Rnaseh1 - ribonuclease H1 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-9 chr3 122293474 122293897 + 0.360980258679647 NA promoter-TSS (NR_030439) promoter-TSS (NR_030439) 18 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-14 chr8 11636685 11637208 + 0.360980258679647 NA Intergenic Intergenic -1189 NM_001281974 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647-2 chr12 80346343 80346934 + 0.360980258679647 NA intron (NM_177267, intron 8 of 8) intron (NM_177267, intron 8 of 8) 45039 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-2 chr17 36131171 36131857 + 0.360980258679647 NA Intergenic Intergenic -2089 NM_001177467 630294 Mm.484916 NM_001177467 ENSMUSG00000092243 Gm7030 EG630294|H2-t9 predicted gene 7030 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-8 chr3 68470466 68471121 + 0.360980258679647 NA intron (NM_001282045, intron 1 of 7) intron (NM_001282045, intron 1 of 7) 2610 NM_001282045 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-12 chr6 38918941 38919341 + 0.360980258679647 NA 5' UTR (NM_011539, exon 1 of 13) 5' UTR (NM_011539, exon 1 of 13) 155 NM_011539 21391 Mm.4054 NM_011539 ENSMUSG00000029925 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet protein-coding common_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647-5 chr9 69468944 69469828 + 0.360980258679647 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 12442 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA unique_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-3 chr2 30847667 30848122 + 0.360980258679647 NA intron (NM_009116, intron 1 of 3) intron (NM_009116, intron 1 of 3) 2527 NM_009116 20204 Mm.1802 NM_009116 ENSMUSG00000039476 Prrx2 Prx2|S8 paired related homeobox 2 protein-coding unique_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647 chr11 30026200 30026629 + 0.360980258679647 NA promoter-TSS (NM_146016) promoter-TSS (NM_146016) -381 NM_146016 237711 Mm.445271 NM_146016 ENSMUSG00000044072 Eml6 2900083P10Rik|C230094A16Rik|EMAP-6 echinoderm microtubule associated protein like 6 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-5 chr13 45684353 45684821 + 0.360980258679647 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 177143 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-13 chr7 43312712 43313033 + 0.360980258679647 NA intron (NM_001357812, intron 1 of 4) CpG 428 NM_001357812 69930 Mm.45367 NM_027264 ENSMUSG00000012640 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 protein-coding common_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647-3 chr2 135861277 135861769 + 0.360980258679647 NA intron (NM_001355156, intron 3 of 37) intron (NM_001355156, intron 3 of 37) 96685 NM_001355154 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-12 chr7 35080925 35081591 + 0.360980258679647 NA Intergenic Intergenic -24692 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-3 chr15 83473701 83474042 + 0.360980258679647 NA Intergenic Intergenic -9265 NM_001358643 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647 chr1 40530020 40530610 + 0.360980258679647 NA intron (NM_010553, intron 6 of 12) intron (NM_010553, intron 6 of 12) 14953 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_36_27_0.123605818999838_4.86915783155752_0.360980258679647-7 chr16 18629340 18629739 + 0.360980258679647 NA intron (NM_213614, intron 2 of 11) CpG 399 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-13 chr7 100964568 100965133 + 0.360980258679647 NA promoter-TSS (NM_183168) promoter-TSS (NM_183168) -484 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak2_37_27_0.161808532487544_4.88825918830138_0.360980258679647-6 chr2 13450501 13450789 + 0.360980258679647 NA intron (NM_001081084, intron 17 of 66) intron (NM_001081084, intron 17 of 66) 41231 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_37_27_0.161808532487544_4.88825918830138_0.360980258679647-2 chr11 97315889 97316224 + 0.360980258679647 NA intron (NM_025927, intron 1 of 7) intron (NM_025927, intron 1 of 7) 340 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_36_27_0.123605818999838_4.86915783155752_0.360980258679647-6 chr18 49755880 49756194 + 0.360980258679647 NA promoter-TSS (NM_001170960) promoter-TSS (NM_001170960) -436 NM_026854 68857 Mm.96010 NM_026854 ENSMUSG00000024505 Dtwd2 1190002H09Rik|8030470C17Rik|AI414673|BB115449 DTW domain containing 2 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-2 chr12 69361719 69362341 + 0.360980258679641 NA Intergenic Intergenic -4854 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-7 chr17 56935117 56935430 + 0.360980258679641 NA exon (NM_022328, exon 1 of 12) exon (NM_022328, exon 1 of 12) 115 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-5 chr16 15195638 15196103 + 0.360980258679641 NA Intergenic Intergenic 289224 NM_025769 66793 Mm.100270 NM_025769 ENSMUSG00000068617 Efcab1 4930449A16Rik|5430404L10Rik EF-hand calcium binding domain 1 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-12 chr5 143180282 143180747 + 0.360980258679641 NA promoter-TSS (NM_177880) promoter-TSS (NM_177880) 261 NM_001359235 57782 Mm.320419 NM_021326 ENSMUSG00000061898 Rbak - RB-associated KRAB zinc finger protein-coding common_peak1_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-2 chr18 16741458 16742055 + 0.360980258679641 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 67490 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-2 chr13 108602637 108603348 + 0.360980258679641 NA Intergenic Intergenic -51185 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding common_peak1_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-4 chr4 130101979 130102439 + 0.360980258679641 NA Intergenic Intergenic -5347 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641 chr11 64979087 64979526 + 0.360980258679641 NA exon (NM_023479, exon 1 of 25) exon (NM_023479, exon 1 of 25) 271 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding unique_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641 chr1 6289944 6290452 + 0.360980258679641 NA Intergenic Intergenic -69133 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-14 chr9 44881573 44881992 + 0.360980258679641 NA promoter-TSS (NM_001357549) promoter-TSS (NM_001357549) -508 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak1_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-6 chr9 98032525 98032980 + 0.360980258679641 NA intron (NM_022319, intron 1 of 17) CpG 415 NM_022319 64085 Mm.440903 NM_022319 ENSMUSG00000032452 Clstn2 2900042C18Rik|AI448973|CSTN2|Cs2|Cst-2|mKIAA4134 calsyntenin 2 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-11 chr3 127780086 127780495 + 0.360980258679641 NA 5' UTR (NM_027808, exon 1 of 14) 5' UTR (NM_027808, exon 1 of 14) 237 NM_027808 71481 Mm.158704 NM_027808 ENSMUSG00000028028 Alpk1 8430410J10Rik|LAK alpha-kinase 1 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-3 chr12 84772520 84772863 + 0.360980258679641 NA promoter-TSS (NM_028863) promoter-TSS (NM_028863) 421 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 NPC intracellular cholesterol transporter 2 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-6 chr17 21516394 21517084 + 0.360980258679641 NA Intergenic Intergenic -18800 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-8 chr19 56022593 56023092 + 0.360980258679641 NA Intergenic Intergenic 127521 NM_001142924 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak1_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-3 chr2 115581466 115581991 + 0.360980258679641 NA promoter-TSS (NM_001145898) promoter-TSS (NM_001145898) 12 NM_001145898 399568 Mm.134929 NM_207264 ENSMUSG00000040282 BC052040 - cDNA sequence BC052040 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-4 chr14 43526888 43527479 + 0.360980258679641 NA Intergenic (GGAA)n|Simple_repeat|Simple_repeat 80830 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-9 chr2 154372392 154372788 + 0.360980258679641 NA intron (NM_025876, intron 1 of 13) CpG 129 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-13 chr8 84186712 84187267 + 0.360980258679641 NA Intergenic Intergenic -8028 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_32_31_-0.232934015602241_4.88353299219888_0.360980258679641 chr1 193400864 193401529 + 0.360980258679641 NA Intergenic Intergenic -30914 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak2_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-10 chr3 69441085 69441559 + 0.360980258679641 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 124404 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak1_32_31_-0.232934015602241_4.88353299219888_0.360980258679641-5 chr4 146610990 146611396 + 0.360980258679641 NA Intergenic Intergenic -64320 NR_045468 67524 Mm.444300 NR_045468 ENSMUSG00000086046 1700095A21Rik - RIKEN cDNA 1700095A21 gene ncRNA common_peak1_146_112_0.0869598036050769_6.86365886421773_0.360944559794171 chr6 17483618 17485282 + 0.360944559794171 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 20493 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_146_112_0.0869598036050769_6.86365886421773_0.360944559794171 chr6 67036004 67037363 + 0.360944559794171 NA promoter-TSS (NR_040278) promoter-TSS (NR_040278) 84 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177-4 chr2 165758825 165759522 + 0.360715883817177 NA intron (NM_001271962, intron 10 of 15) intron (NM_001271962, intron 10 of 15) 99000 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177-3 chr2 158229441 158230024 + 0.360715883817177 NA promoter-TSS (NM_177657) promoter-TSS (NM_177657) -508 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak2_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-3 chr3 102668048 102668773 + 0.360715883817177 NA Intergenic Intergenic -66360 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177-7 chr9 57467164 57468034 + 0.360715883817177 NA intron (NM_001301635, intron 1 of 5) intron (NM_001301635, intron 1 of 5) 461 NM_001301634 56807 Mm.102278 NM_020270 ENSMUSG00000040722 Scamp5 Sc5 secretory carrier membrane protein 5 protein-coding common_peak1_57_43_0.115481402739969_5.51717232000728_0.360715883817177-3 chr4 134852535 134853110 + 0.360715883817177 NA intron (NM_001355499, intron 1 of 11) CpG 523 NM_001355501 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding common_peak2_58_43_0.139969466685383_5.52941635197999_0.360715883817177 chr2 30827755 30828184 + 0.360715883817177 NA intron (NM_133346, intron 1 of 5) CpG 331 NM_133346 72323 Mm.27656 NM_133346 ENSMUSG00000039483 Asb6 2510004M11Rik|AA409356 ankyrin repeat and SOCS box-containing 6 protein-coding common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177-2 chr13 89739592 89740286 + 0.360715883817177 NA intron (NM_001081249, intron 1 of 14) intron (NM_001081249, intron 1 of 14) 2573 NM_001081249 13003 Mm.158700 NM_019389 ENSMUSG00000021614 Vcan 5430420N07Rik|9430051N09|Cspg2|DPEAAE|NG2|PG-M|PG-M(V0)|PG-M(V1)|hdf versican protein-coding common_peak2_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-2 chr15 66733074 66733621 + 0.360715883817177 NA intron (NM_009375, intron 27 of 47) intron (NM_009375, intron 27 of 47) 62577 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding common_peak2_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-6 chr8 80880228 80880922 + 0.360715883817177 NA promoter-TSS (NM_001301298) promoter-TSS (NM_001301298) -56 NM_001301298 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak1_57_43_0.115481402739969_5.51717232000728_0.360715883817177-4 chr6 118419082 118419849 + 0.360715883817177 NA promoter-TSS (NM_194339) promoter-TSS (NM_194339) -48 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177-6 chr4 140961383 140961800 + 0.360715883817177 NA intron (NM_001355515, intron 1 of 7) CpG 320 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding common_peak2_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-5 chr5 146221114 146221680 + 0.360715883817177 NA promoter-TSS (NM_001256086) promoter-TSS (NM_001256086) 60 NM_028774 74132 Mm.26696 NM_028774 ENSMUSG00000029634 Rnf6 1200013I08Rik|5730419H05Rik|AA537053 ring finger protein (C3H2C3 type) 6 protein-coding common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177-5 chr3 95015770 95016164 + 0.360715883817177 NA promoter-TSS (NM_030074) promoter-TSS (NM_030074) -510 NM_001357863 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak1_57_43_0.115481402739969_5.51717232000728_0.360715883817177 chr16 16358248 16358876 + 0.360715883817177 NA promoter-TSS (NM_001276341) promoter-TSS (NM_001276341) 13 NM_001276341 74006 Mm.218820 NM_152816 ENSMUSG00000022789 Dnm1l 6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python dynamin 1-like protein-coding common_peak2_51_48_-0.196226649233339_5.51659651949854_0.360715883817177 chr1 132287140 132288022 + 0.360715883817177 NA Intergenic Intergenic -11045 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_57_43_0.115481402739969_5.51717232000728_0.360715883817177-2 chr4 134287518 134288441 + 0.360715883817177 NA promoter-TSS (NM_001163794) promoter-TSS (NM_001163794) -133 NM_146156 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak1_58_43_0.139969466685383_5.52941635197999_0.360715883817177 chr11 31502311 31502802 + 0.360715883817177 NA Intergenic Intergenic -132495 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_58_43_0.139969466685383_5.52941635197999_0.360715883817177-2 chr5 151069813 151070456 + 0.360715883817177 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 117527 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding common_peak1_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-3 chr8 64205480 64206033 + 0.360715883817177 NA 5' UTR (NM_009390, exon 1 of 21) 5' UTR (NM_009390, exon 1 of 21) 252 NM_009390 21892 Mm.418367 NM_009390 ENSMUSG00000053626 Tll1 Tll|Tll-1|b2b2476Clo tolloid-like protein-coding common_peak2_57_43_0.115481402739969_5.51717232000728_0.360715883817177-2 chr8 46487856 46488594 + 0.360715883817177 NA intron (NM_007981, intron 1 of 20) intron (NM_007981, intron 1 of 20) -2741 NM_001302163 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_57_43_0.115481402739969_5.51717232000728_0.360715883817177 chr7 37769382 37770375 + 0.360715883817177 NA promoter-TSS (NM_172385) promoter-TSS (NM_172385) -126 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_51_48_-0.196226649233339_5.51659651949854_0.360715883817177 chr10 86295408 86296188 + 0.360715883817177 NA intron (NM_001164495, intron 6 of 6) intron (NM_001164495, intron 6 of 6) -4614 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-2 chr7 114204193 114204879 + 0.360715883817177 NA Intergenic PB1D10|SINE|Alu 50144 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak2_51_48_-0.196226649233339_5.51659651949854_0.360715883817177-4 chr4 34686871 34687457 + 0.360715883817177 NA intron (NM_011895, intron 1 of 7) CpG 274 NM_011895 24060 Mm.281885 NM_011895 ENSMUSG00000028293 Slc35a1 AA408150|AI314851 solute carrier family 35 (CMP-sialic acid transporter), member 1 protein-coding common_peak2_104_93_-0.129452236477623_6.48986273343883_0.360487696578537 chr7 139294568 139295748 + 0.360487696578537 NA Intergenic Intergenic 46676 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_113_86_0.100000581350629_6.49294378652404_0.360487696578537 chr8 11375663 11376704 + 0.360487696578537 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -63357 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_104_93_-0.129452236477623_6.48986273343883_0.360487696578537 chr9 123112485 123113556 + 0.360487696578537 NA promoter-TSS (NM_001081188) promoter-TSS (NM_001081188) 185 NM_026917 69035 Mm.28300 NM_026917 ENSMUSG00000025786 Zdhhc3 1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373 zinc finger, DHHC domain containing 3 protein-coding common_peak2_137_121_-0.114103413112422_6.87368563100668_0.360432268979005 chr16 37868034 37869641 + 0.360432268979005 NA exon (NM_177093, exon 1 of 4) exon (NM_177093, exon 1 of 4) 437 NM_177093 320184 Mm.390882 NM_177093 ENSMUSG00000034158 Lrrc58 1810012N18Rik|C330018J07Rik leucine rich repeat containing 58 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-18 chr5 43868788 43869115 + 0.360333814299798 NA exon (NM_007646, exon 1 of 8) exon (NM_007646, exon 1 of 8) 142 NM_007646 12494 Mm.249873 NM_007646 ENSMUSG00000029084 Cd38 ADPRC 1|Cd38-rs1|I-19 CD38 antigen protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-15 chr4 33248890 33249158 + 0.360333814299798 NA promoter-TSS (NM_001033225) promoter-TSS (NM_001033225) -237 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-9 chr16 91969060 91969465 + 0.360333814299798 NA Intergenic Intergenic -37632 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-11 chr2 117455864 117456172 + 0.360333814299798 NA Intergenic Intergenic -113141 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-6 chr17 33781876 33782130 + 0.360333814299798 NA promoter-TSS (NM_020581) promoter-TSS (NM_020581) -428 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding unique_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-2 chr12 8334640 8334951 + 0.360333814299798 NA intron (NM_021429, intron 4 of 6) intron (NM_021429, intron 4 of 6) 21362 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-12 chr2 150218155 150218615 + 0.360333814299798 NA intron (NM_001142411, intron 1 of 3) intron (NM_001142411, intron 1 of 3) 286 NM_001142411 245174 Mm.378428 NM_001142411 ENSMUSG00000060336 Zfp937 EG245174|Gm4979|ZIPO-I zinc finger protein 937 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-8 chr16 44631415 44631628 + 0.360333814299798 NA Intergenic Intergenic -72651 NM_172506 117606 Mm.41561 NM_172506 ENSMUSG00000022687 Boc 4732455C11|mFLJ00376 biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-5 chr13 41644712 41645075 + 0.360333814299798 NA Intergenic Intergenic 38677 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-10 chr5 13398376 13398748 + 0.360333814299798 NA promoter-TSS (NM_009152) promoter-TSS (NM_009152) -435 NM_001243073 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-28 chrX 102119623 102119932 + 0.360333814299798 NA intron (NM_027181, intron 1 of 3) intron (NM_027181, intron 1 of 3) 312 NM_027181 69713 Mm.371635 NM_027181 ENSMUSG00000079480 Pin4 2410002I22Rik|EPVH|Par14 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-5 chr19 10116733 10117063 + 0.360333814299798 NA Intergenic Intergenic -15395 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-14 chr8 126834640 126834976 + 0.360333814299798 NA Intergenic Intergenic -14212 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-13 chr3 96488520 96488743 + 0.360333814299798 NA Intergenic CpG -36325 NM_001256181 329716 Mm.275223 NM_183223 ENSMUSG00000046317 BC107364 D730018G16 cDNA sequence BC107364 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-3 chr1 149916491 149916884 + 0.360333814299798 NA intron (NM_008869, intron 3 of 17) intron (NM_008869, intron 3 of 17) 5752 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-6 chr19 31615708 31616197 + 0.360333814299798 NA intron (NM_001013833, intron 1 of 17) intron (NM_001013833, intron 1 of 17) 48418 NM_011160 19091 Mm.381170 NM_011160 ENSMUSG00000052920 Prkg1 AW125416|CGKI|Gm19690|Prkg1b|Prkgr1b protein kinase, cGMP-dependent, type I protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-8 chr4 118061542 118061874 + 0.360333814299798 NA intron (NM_001285520, intron 2 of 11) intron (NM_001285520, intron 2 of 11) 73238 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-11 chr6 99486132 99486629 + 0.360333814299798 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 34613 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-27 chr8 106069753 106070065 + 0.360333814299798 NA intron (NM_010901, intron 1 of 9) intron (NM_010901, intron 1 of 9) 10306 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-2 chr10 95514478 95514718 + 0.360333814299798 NA promoter-TSS (NM_080560) promoter-TSS (NM_080560) -564 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-17 chr4 155668839 155669046 + 0.360333814299798 NA 5' UTR (NM_001256107, exon 1 of 20) 5' UTR (NM_001256107, exon 1 of 20) 312 NM_001256108 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-15 chr9 41487128 41487695 + 0.360333814299798 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 12518 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA unique_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798 chr11 69340109 69340516 + 0.360333814299798 NA promoter-TSS (NR_027827) promoter-TSS (NR_027827) -457 NR_027827 80515 Mm.5324 NM_020591 ENSMUSG00000043419 Chd3os 2310043C11Rik|A030009H04Rik|AA589459|AB041807|MNCb-2875|RNF21 chromodomain helicase DNA binding protein 3, opposite strand ncRNA common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-11 chr4 5768247 5768533 + 0.360333814299798 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 44078 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798 chr10 24459342 24459704 + 0.360333814299798 NA Intergenic Intergenic -135919 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-9 chr3 29903521 29903819 + 0.360333814299798 NA intron (NR_110437, intron 1 of 1) intron (NR_110437, intron 1 of 1) 12653 NR_110437 102636083 NR_110437 ENSMUSG00000102590 Mannr Manr Mecom adjacent non-protein coding RNA ncRNA unique_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-3 chr19 53830804 53831051 + 0.360333814299798 NA intron (NM_001170847, intron 5 of 13) intron (NM_001170847, intron 5 of 13) -61304 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-12 chr8 73178242 73178447 + 0.360333814299798 NA intron (NM_001317391, intron 3 of 15) intron (NM_001317391, intron 3 of 15) 161832 NR_039551 100628574 NR_039551 ENSMUSG00000093140 Mir28b mmu-mir-28b microRNA 28b ncRNA common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-14 chr3 101514398 101514651 + 0.360333814299798 NA Intergenic Intergenic 90183 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-16 chrX 48453935 48454196 + 0.360333814299798 NA intron (NM_019680, intron 1 of 8) CpG 9067 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-4 chr12 110798313 110798619 + 0.360333814299798 NA intron (NM_001347428, intron 2 of 2) intron (NM_001347428, intron 2 of 2) 42473 NM_011973 26448 Mm.140948 NM_011973 ENSMUSG00000056458 Mok RAGE1|Rage|Stk30 MOK protein kinase protein-coding unique_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-4 chr4 45442335 45442908 + 0.360333814299798 NA intron (NM_001033306, intron 5 of 5) intron (NM_001033306, intron 5 of 5) -33855 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-5 chr13 99152683 99152897 + 0.360333814299798 NA Intergenic Intergenic -32033 NM_001004149 238803 Mm.343207 NM_001004149 ENSMUSG00000050919 Zfp366 DC-SCRIPT|Znf366 zinc finger protein 366 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-20 chr5 90757976 90758250 + 0.360333814299798 NA Intergenic Intergenic -1185 NM_009141 20311 Mm.4660 NM_009141 ENSMUSG00000029371 Cxcl5 AMCF-II|Cxcl6|ENA-78|GCP-2|LIX|Scyb5|Scyb6 chemokine (C-X-C motif) ligand 5 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-3 chr17 8311222 8311501 + 0.360333814299798 NA promoter-TSS (NR_073374) promoter-TSS (NR_073374) -243 NR_073374 75060 Mm.426530 NR_073374 ENSMUSG00000087478 4930506C21Rik - RIKEN cDNA 4930506C21 gene ncRNA common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-10 chr3 52101747 52101967 + 0.360333814299798 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 3149 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798 chr1 71912848 71913162 + 0.360333814299798 NA Intergenic Intergenic 24893 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-16 chr4 139234558 139234779 + 0.360333814299798 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 40557 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-4 chr17 47630011 47630450 + 0.360333814299798 NA promoter-TSS (NM_198421) promoter-TSS (NM_198421) -460 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-24 chr6 134791294 134791637 + 0.360333814299798 NA promoter-TSS (NR_151454) promoter-TSS (NR_151454) -895 NR_151454 105242798 Mm.398227 NR_151454 1700055D16Rik - RIKEN cDNA 1700055D16 gene ncRNA common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-21 chr5 90891171 90891573 + 0.360333814299798 NA exon (NM_008176, exon 1 of 4) exon (NM_008176, exon 1 of 4) 127 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-13 chr6 94657864 94658127 + 0.360333814299798 NA intron (NM_001355269, intron 2 of 17) intron (NM_001355269, intron 2 of 17) 42150 NM_001355269 16206 Mm.245210 NM_008377 ENSMUSG00000030029 Lrig1 D6Bwg0781e|Img|LIG-1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-13 chr8 110800757 110801189 + 0.360333814299798 NA intron (NM_029646, intron 1 of 7) intron (NM_029646, intron 1 of 7) 4951 NM_029646 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-4 chr12 36156241 36156640 + 0.360333814299798 NA promoter-TSS (NM_146033) promoter-TSS (NM_146033) 385 NM_025840 66912 Mm.288669 NM_025840 ENSMUSG00000020547 Bzw2 1110001I24Rik|Bdm2|HSPC028 basic leucine zipper and W2 domains 2 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-19 chr5 53509958 53510226 + 0.360333814299798 NA Intergenic Intergenic -45687 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-25 chr7 42505259 42505555 + 0.360333814299798 NA intron (NM_001309388, intron 1 of 6) CpG 346 NM_001309389 434178 Mm.333810 NM_001309388 ENSMUSG00000092416 Zfp141 - zinc finger protein 141 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-7 chr14 69396082 69396462 + 0.360333814299798 NA Intergenic Intergenic 59121 NM_001359160 100862375 Mm.489765 NM_001359159 ENSMUSG00000022066 Entpd4b Gm21685 ectonucleoside triphosphate diphosphohydrolase 4B protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-23 chr5 129942150 129942390 + 0.360333814299798 NA exon (NM_001001327, exon 1 of 2) exon (NM_001001327, exon 1 of 2) 161 NM_027121 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-15 chr7 98816478 98816776 + 0.360333814299798 NA Intergenic Intergenic -18485 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-7 chr2 30062466 30062657 + 0.360333814299798 NA intron (NM_023871, intron 1 of 7) intron (NM_023871, intron 1 of 7) 565 NM_023871 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798 chr1 162508783 162509208 + 0.360333814299798 NA Intergenic Intergenic -30961 NM_001038619 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-2 chr1 119836593 119836913 + 0.360333814299798 NA intron (NM_019933, intron 1 of 26) intron (NM_019933, intron 1 of 26) 318 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-12 chr4 134762195 134762687 + 0.360333814299798 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 5563 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-22 chr5 92898156 92898412 + 0.360333814299798 NA intron (NM_001077596, intron 1 of 9) CpG 291 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-16 chrX 153432981 153433321 + 0.360333814299798 NA Intergenic Intergenic -65081 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-14 chr7 16210533 16210909 + 0.360333814299798 NA intron (NM_027883, intron 6 of 16) intron (NM_027883, intron 6 of 16) 11272 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-2 chr14 76912695 76913048 + 0.360333814299798 NA Intergenic Intergenic 123746 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase domain containing 1 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-26 chr8 60859384 60859695 + 0.360333814299798 NA Intergenic Intergenic -30854 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-10 chr2 72439788 72440239 + 0.360333814299798 NA intron (NM_023057, intron 19 of 19) intron (NM_023057, intron 19 of 19) -36206 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding unique_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-6 chrX 136740863 136741221 + 0.360333814299798 NA 5' UTR (NM_001168225, exon 1 of 4) 5' UTR (NM_001168225, exon 1 of 4) 113 NM_001168225 56397 Mm.27218 NM_019768 ENSMUSG00000031422 Morf4l2 2410017O14Rik|Mrgx|Sid393p|mKIAA0026 mortality factor 4 like 2 protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-9 chr4 137501835 137502035 + 0.360333814299798 NA intron (NM_008305, intron 2 of 96) intron (NM_008305, intron 2 of 96) 33132 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-7 chr3 144575578 144575947 + 0.360333814299798 NA intron (NM_053102, intron 1 of 4) intron (NM_053102, intron 1 of 4) 5335 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-5 chr8 122228635 122228934 + 0.360333814299798 NA Intergenic Intergenic -53357 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-3 chr12 75702101 75702402 + 0.360333814299798 NA Intergenic Intergenic -32714 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak1_21_15_0.186230382170304_4.09311519108515_0.360333814299798-8 chr2 153444917 153445309 + 0.360333814299798 NA promoter-TSS (NM_001001986) promoter-TSS (NM_001001986) -634 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak2_21_15_0.186230382170304_4.09311519108515_0.360333814299798-6 chr14 57798619 57798846 + 0.360333814299798 NA TTS (NR_037238) TTS (NR_037238) 308 NR_037238 100526476 NR_037238 ENSMUSG00000092784 Mir3077 mir-3077|mmu-mir-3077 microRNA 3077 ncRNA common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-14 chr8 34954701 34954903 + 0.360333814299795 NA intron (NM_175091, intron 1 of 26) intron (NM_175091, intron 1 of 26) 10888 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-3 chr10 68263993 68264306 + 0.360333814299795 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 14577 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-22 chr6 108453999 108454215 + 0.360333814299795 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -35636 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-4 chr15 41715125 41715514 + 0.360333814299795 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -73676 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-19 chr5 3321610 3322010 + 0.360333814299795 NA Intergenic B1F|SINE|Alu -22083 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-9 chr15 74620318 74620626 + 0.360333814299795 NA intron (NM_001177437, intron 12 of 26) intron (NM_001177437, intron 12 of 26) 15846 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-7 chr2 30444012 30444230 + 0.360333814299795 NA intron (NM_138748, intron 9 of 9) intron (NM_138748, intron 9 of 9) 28071 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-11 chr17 35517302 35517552 + 0.360333814299795 NA promoter-TSS (NM_001163764) promoter-TSS (NM_001163764) 311 NM_146248 240084 Mm.49544 NM_146248 ENSMUSG00000040312 Cchcr1 Hcr coiled-coil alpha-helical rod protein 1 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-6 chr11 58334054 58334386 + 0.360333814299795 NA intron (NM_001308167, intron 2 of 6) intron (NM_001308167, intron 2 of 6) 3430 NM_001308168 79566 Mm.290534 NM_024480 ENSMUSG00000013646 Sh3bp5l 2310074E09Rik|BC003251|mKIAA1720 SH3 binding domain protein 5 like protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-16 chr2 152605841 152606169 + 0.360333814299795 NA intron (NM_001037247, intron 1 of 1) intron (NM_001037247, intron 1 of 1) 1678 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-5 chr10 128458644 128458962 + 0.360333814299795 NA promoter-TSS (NM_001114096) promoter-TSS (NM_001114096) 123 NR_106183 102465894 NR_106183 ENSMUSG00000098957 Mir8105 Gm27346|mmu-mir-8105 microRNA 8105 ncRNA common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-6 chr16 26082542 26082799 + 0.360333814299795 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 23114 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795 chr11 86581301 86581537 + 0.360333814299795 NA Intergenic Intergenic 2739 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-7 chr17 59012992 59013246 + 0.360333814299795 NA TTS (NR_145522) TTS (NR_145522) 203 NM_026497 67993 Mm.36507 NM_026497 ENSMUSG00000024228 Nudt12 0610016O18Rik nudix (nucleoside diphosphate linked moiety X)-type motif 12 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-18 chr4 45474517 45474891 + 0.360333814299795 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 56124 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-9 chr5 148757518 148757843 + 0.360333814299795 NA Intergenic Intergenic 15840 NR_028285 70138 Mm.417834 NR_028285 ENSMUSG00000086494 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene ncRNA unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-2 chr16 91546527 91546791 + 0.360333814299795 NA promoter-TSS (NM_008338) promoter-TSS (NM_008338) -435 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-6 chr19 6995284 6995559 + 0.360333814299795 NA promoter-TSS (NR_027351) promoter-TSS (NR_027351) 616 NM_026675 68323 Mm.49041 NM_026675 ENSMUSG00000037349 Nudt22 0610006K04Rik|AI851793|AW545547 nudix (nucleoside diphosphate linked moiety X)-type motif 22 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-8 chr3 88296655 88296885 + 0.360333814299795 NA promoter-TSS (NM_009836) promoter-TSS (NM_009836) 68 NM_029801 76927 Mm.273330 NM_029801 ENSMUSG00000010538 Tsacc 1700021C14Rik|SIP TSSK6 activating co-chaperone protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-3 chr13 28884203 28884433 + 0.360333814299795 NA intron (NR_045054, intron 1 of 7) intron (NR_045054, intron 1 of 7) 1104 NR_045054 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-14 chr2 84525495 84525894 + 0.360333814299795 NA Intergenic Intergenic -18821 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-10 chr15 75820512 75820713 + 0.360333814299795 NA intron (NM_172121, intron 3 of 11) intron (NM_172121, intron 3 of 11) 21296 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-7 chr11 80810531 80811014 + 0.360333814299795 NA intron (NM_029537, intron 1 of 6) intron (NM_029537, intron 1 of 6) 357 NM_029537 103743 Mm.27682 NM_029537 ENSMUSG00000035413 Tmem98 6530411B15Rik|AI463522 transmembrane protein 98 protein-coding unique_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795 chr5 144910687 144910903 + 0.360333814299795 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) -13979 NR_106006 102465629 NR_106006 ENSMUSG00000098822 Mir7039 Gm27824|mmu-mir-7039 microRNA 7039 ncRNA common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-15 chr2 134786326 134786556 + 0.360333814299795 NA 5' UTR (NM_019677, exon 1 of 33) 5' UTR (NM_019677, exon 1 of 33) 277 NM_001145830 18795 Mm.330607 NM_019677 ENSMUSG00000051177 Plcb1 3110043I21Rik|AI132408|Plcb|mKIAA0581 phospholipase C, beta 1 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-2 chr1 193390083 193390503 + 0.360333814299795 NA Intergenic Intergenic -20011 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-3 chr17 12960572 12961048 + 0.360333814299795 NA promoter-TSS (NM_009338) promoter-TSS (NM_009338) -85 NM_009338 110460 Mm.439711 NM_009338 ENSMUSG00000023832 Acat2 AW742799|Tcp-1x|Tcp1-rs1 acetyl-Coenzyme A acetyltransferase 2 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-10 chr4 147848577 147848776 + 0.360333814299795 NA promoter-TSS (NM_001355730) promoter-TSS (NM_001355730) -258 NM_198619 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-23 chr6 113638538 113638836 + 0.360333814299795 NA intron (NM_001113553, intron 1 of 11) intron (NM_001113553, intron 1 of 11) 220 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-5 chr16 18878053 18878301 + 0.360333814299795 NA intron (NM_010435, intron 1 of 24) intron (NM_010435, intron 1 of 24) 1427 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-9 chr4 132768389 132768671 + 0.360333814299795 NA intron (NM_011284, intron 1 of 8) CpG 170 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795 chr1 176831997 176832283 + 0.360333814299795 NA intron (NM_001357390, intron 5 of 18) intron (NM_001357390, intron 5 of 18) 3993 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-8 chr12 84114437 84114699 + 0.360333814299795 NA intron (NM_028821, intron 1 of 7) CpG 240 NM_001346528 105000 Mm.101525 NM_028821 ENSMUSG00000042523 Dnal1 1700010H15Rik|AW121714|Dnalc1|E330027P08Rik dynein, axonemal, light chain 1 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-17 chr3 93495531 93495889 + 0.360333814299795 NA Intergenic Intergenic -24786 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-11 chr5 66550907 66551102 + 0.360333814299795 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 67813 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-8 chr4 140809370 140809886 + 0.360333814299795 NA intron (NM_011060, intron 1 of 15) MER20|DNA|hAT-Charlie 1020 NM_011060 18601 Mm.20851 NM_011060 ENSMUSG00000025328 Padi3 AI507004|Pad3|Pdi3|mKIAA4171 peptidyl arginine deiminase, type III protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-24 chr7 110002735 110002989 + 0.360333814299795 NA intron (NR_037959, intron 2 of 2) MLTR14|LTR|ERV1 3784 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-4 chr17 31747040 31747354 + 0.360333814299795 NA Intergenic Intergenic 69266 NM_001278570 12954 Mm.1228 NM_013501 ENSMUSG00000024041 Cryaa Acry-1|Crya-1|Crya1|DAcry-1|lop18 crystallin, alpha A protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-12 chr18 5133855 5134070 + 0.360333814299795 NA Intergenic Intergenic 31769 NR_153824 102637682 Mm.451914 NR_153824 Gm26682 Gm38715 predicted gene, 26682 ncRNA common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-15 chrX 143344269 143344507 + 0.360333814299795 NA intron (NM_001358592, intron 4 of 11) intron (NM_001358592, intron 4 of 11) 49874 NM_001358592 83453 Mm.157697 NM_031258 ENSMUSG00000031283 Chrdl1 CHL|CHL1|Nrln1|VOPT chordin-like 1 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-20 chr5 151066142 151066512 + 0.360333814299795 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 113720 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-21 chr6 17978698 17978965 + 0.360333814299795 NA Intergenic Intergenic 51614 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-5 chr18 36512082 36512582 + 0.360333814299795 NA intron (NM_010415, intron 3 of 5) intron (NM_010415, intron 3 of 5) 3473 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-13 chr7 82811331 82811549 + 0.360333814299795 NA Intergenic Intergenic -55796 NR_046004 77800 Mm.444811 NR_046004 ENSMUSG00000086690 4933406J10Rik A930009F24Rik RIKEN cDNA 4933406J10 gene ncRNA common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-13 chr19 42073108 42073384 + 0.360333814299795 NA Intergenic Intergenic 13124 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-2 chr12 33179742 33180098 + 0.360333814299795 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 32234 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795 chr13 113845746 113846229 + 0.360333814299795 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 51479 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak1_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-12 chr5 108629920 108630157 + 0.360333814299795 NA promoter-TSS (NM_001282052) promoter-TSS (NM_001282052) 228 NM_001359426 72392 Mm.258324 NM_028223 ENSMUSG00000013495 Tmem175 3010001K23Rik|AI504381|mTMEM175 transmembrane protein 175 protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-25 chr7 142392937 142393248 + 0.360333814299795 NA Intergenic Intergenic -5222 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak2_17_18_-0.349161285197636_4.07334687084477_0.360333814299795-4 chr10 78714973 78715259 + 0.360333814299795 NA exon (NM_009809, exon 4 of 7) exon (NM_009809, exon 4 of 7) 3177 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding common_peak1_76_69_-0.148448564773777_6.05505873455808_0.360272380583625-3 chr2 57116567 57117558 + 0.360272380583625 NA intron (NM_001139509, intron 1 of 7) intron (NM_001139509, intron 1 of 7) -2024 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_83_63_0.105479716446136_6.05273985822307_0.360272380583625 chr11 86600167 86600849 + 0.360272380583625 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -16350 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_83_63_0.105479716446136_6.05273985822307_0.360272380583625-2 chr6 127992123 127992697 + 0.360272380583625 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 104788 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak1_76_69_-0.148448564773777_6.05505873455808_0.360272380583625-2 chr15 27996903 27997562 + 0.360272380583625 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 28616 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_76_69_-0.148448564773777_6.05505873455808_0.360272380583625 chr10 116267117 116267568 + 0.360272380583625 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -34032 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_83_63_0.105479716446136_6.05273985822307_0.360272380583625-3 chr7 27978506 27979454 + 0.360272380583625 NA intron (NM_001081021, intron 1 of 5) intron (NM_001081021, intron 1 of 5) 177 NM_001081021 338354 Mm.389873 NM_001081021 ENSMUSG00000063047 Zfp780b B230208L21Rik zinc finger protein 780B protein-coding common_peak1_175_153_-0.101721097244329_7.21592599207274_0.360261037462896 chr11 52098781 52099708 + 0.360261037462896 NA intron (NM_019411, intron 1 of 6) CpG 420 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_187_144_0.0796422541406319_7.21973021708525_0.360261037462896 chr8 4237883 4239614 + 0.360261037462896 NA promoter-TSS (NM_001164172) promoter-TSS (NM_001164172) 8 NM_001164172 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak1_138_122_-0.115537453956153_6.88474577836116_0.359928666095459 chr19 5770535 5771409 + 0.359928666095459 NA intron (NR_155264, intron 1 of 15) intron (NR_155264, intron 1 of 15) 447 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding common_peak2_188_145_0.0773263620210276_7.22848773989053_0.359864723076472 chr16 17797228 17798504 + 0.359864723076472 NA intron (NM_153790, intron 1 of 10) CpG 584 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding common_peak2_105_94_-0.131140532634332_6.50428534201378_0.359830375713647 chr19 53420463 53422018 + 0.359830375713647 NA Intergenic Intergenic -30606 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_114_87_0.0960236023395913_6.50744341980709_0.359830375713647 chr5 124482971 124483868 + 0.359830375713647 NA intron (NM_029532, intron 1 of 1) CpG 264 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak2_105_94_-0.131140532634332_6.50428534201378_0.359830375713647-2 chr8 36025978 36027112 + 0.359830375713647 NA Intergenic Intergenic -68283 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_267_229_-0.0780469924504752_7.80646655471914_0.359816279126084 chr15 83171420 83173282 + 0.359816279126084 NA promoter-TSS (NM_029787) promoter-TSS (NM_029787) -143 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_281_218_0.0655998867818468_7.8075870029921_0.359816279126084 chr17 46855633 46857515 + 0.359816279126084 NA Intergenic CpG -25161 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Bicral Gltscr1l|mKIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding common_peak2_189_146_0.0750380493161735_7.23719136949445_0.3594736776985 chr17 30003714 30005249 + 0.3594736776985 NA promoter-TSS (NM_148926) promoter-TSS (NM_148926) -558 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_150_115_0.0876169091294674_6.90178944969231_0.359433531952881 chr3 75955493 75956930 + 0.359433531952881 NA exon (NM_175193, exon 1 of 15) exon (NM_175193, exon 1 of 15) 738 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-7 chr9 44305047 44305636 + 0.359431063687663 NA intron (NM_172162, intron 1 of 9) CpG 330 NM_172162 102423 Mm.24570 NM_172162 ENSMUSG00000032119 Hinfp AA589481|HiNF-P|Mizf histone H4 transcription factor protein-coding common_peak1_52_49_-0.198086134504864_5.54481312252229_0.359431063687663 chr16 59638876 59639682 + 0.359431063687663 NA promoter-TSS (NM_019665) promoter-TSS (NM_019665) 60 NM_019665 56297 Mm.392505 NM_019665 ENSMUSG00000022722 Arl6 1110018H24Rik|2210411E14Rik|BBS3 ADP-ribosylation factor-like 6 protein-coding common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663-2 chr18 50053519 50054138 + 0.359431063687663 NA promoter-TSS (NR_155293) promoter-TSS (NR_155293) -166 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak2_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-2 chr13 59675193 59676072 + 0.359431063687663 NA intron (NM_027307, intron 1 of 10) G-rich|Low_complexity|Low_complexity 152 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak2_59_44_0.13162446929621_5.55766533097778_0.359431063687663 chr11 79736847 79737679 + 0.359431063687663 NA Intergenic Intergenic 10863 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak2_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-5 chr2 125505303 125505910 + 0.359431063687663 NA 5' UTR (NM_007993, exon 2 of 66) 5' UTR (NM_007993, exon 2 of 66) 832 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding common_peak2_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-3 chr15 39043218 39043874 + 0.359431063687663 NA Intergenic Intergenic -33386 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak2_59_44_0.13162446929621_5.55766533097778_0.359431063687663-2 chr12 108309920 108310535 + 0.359431063687663 NA intron (NM_001044380, intron 1 of 8) intron (NM_001044380, intron 1 of 8) 3957 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663-3 chr2 109677354 109677888 + 0.359431063687663 NA intron (NM_001285419, intron 1 of 1) CpG 589 NM_001285419 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-6 chr5 92811597 92812382 + 0.359431063687663 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 2607 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_52_49_-0.198086134504864_5.54481312252229_0.359431063687663 chr10 71147244 71147964 + 0.359431063687663 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 12086 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-8 chr9 78527627 78528442 + 0.359431063687663 NA Intergenic ID_B1|SINE|B4 -46310 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-4 chr2 30760134 30760720 + 0.359431063687663 NA Intergenic Intergenic 39217 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663-7 chr9 67207106 67207859 + 0.359431063687663 NA Intergenic Intergenic 29244 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663-4 chr2 163808826 163809726 + 0.359431063687663 NA Intergenic Intergenic -11558 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak2_52_49_-0.198086134504864_5.54481312252229_0.359431063687663-3 chr13 94976350 94976953 + 0.359431063687663 NA intron (NM_172590, intron 1 of 12) intron (NM_172590, intron 1 of 12) 307 NM_172590 218460 Mm.33856 NM_172590 ENSMUSG00000042015 Wdr41 B830029I03Rik|MSTP048 WD repeat domain 41 protein-coding common_peak2_59_44_0.13162446929621_5.55766533097778_0.359431063687663-4 chr15 56840828 56841617 + 0.359431063687663 NA Intergenic Intergenic -146676 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-2 chr16 38452797 38453362 + 0.359431063687663 NA promoter-TSS (NM_007414) promoter-TSS (NM_007414) -390 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663-5 chr4 155847707 155848209 + 0.359431063687663 NA intron (NM_001356381, intron 1 of 15) CpG 556 NM_001356381 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak2_52_49_-0.198086134504864_5.54481312252229_0.359431063687663-2 chr11 116852478 116853054 + 0.359431063687663 NA promoter-TSS (NM_001361585) promoter-TSS (NM_001361585) 328 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-6 chr8 117327157 117327808 + 0.359431063687663 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -21688 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_52_49_-0.198086134504864_5.54481312252229_0.359431063687663-5 chr8 111299527 111300165 + 0.359431063687663 NA intron (NM_146218, intron 1 of 12) CpG 376 NM_146218 234736 Mm.334816 NM_146218 ENSMUSG00000033596 Rfwd3 BC027246 ring finger and WD repeat domain 3 protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-3 chr2 144369015 144369469 + 0.359431063687663 NA intron (NM_001166640, intron 1 of 10) CpG 207 NM_181417 228714 Mm.227925 NM_181417 ENSMUSG00000027425 Kat14 2510008M08Rik|ATAC2|AU023459|Csrp2bp|D2Ertd473e|D2Wsu131e|E430020F17 lysine acetyltransferase 14 protein-coding common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663-6 chr6 48047412 48048086 + 0.359431063687663 NA promoter-TSS (NM_001347139) promoter-TSS (NM_001347139) 45 NM_001347139 72306 Mm.381553 NM_001081382 ENSMUSG00000071477 Zfp777 2500002G23Rik zinc finger protein 777 protein-coding common_peak2_52_49_-0.198086134504864_5.54481312252229_0.359431063687663-4 chr2 143915538 143916185 + 0.359431063687663 NA intron (NM_019771, intron 1 of 3) intron (NM_019771, intron 1 of 3) 530 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663 chr11 58103045 58103780 + 0.359431063687663 NA promoter-TSS (NM_001356477) promoter-TSS (NM_001356477) -558 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak2_53_49_-0.171309338874565_5.55820152033744_0.359431063687663 chr10 86705806 86706527 + 0.359431063687663 NA promoter-TSS (NM_011631) promoter-TSS (NM_011631) 355 NM_001003939 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-4 chr4 88935700 88936518 + 0.359431063687663 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 5933 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak2_59_44_0.13162446929621_5.55766533097778_0.359431063687663-5 chr4 125066734 125067434 + 0.359431063687663 NA intron (NM_175246, intron 1 of 3) CpG 412 NM_001356560 76793 Mm.22548 NM_175246 ENSMUSG00000050213 Snip1 2410133M08Rik Smad nuclear interacting protein 1 protein-coding common_peak2_59_44_0.13162446929621_5.55766533097778_0.359431063687663-3 chr15 52712449 52712982 + 0.359431063687663 NA intron (NM_027212, intron 1 of 3) CpG 270 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_59_44_0.13162446929621_5.55766533097778_0.359431063687663 chr17 23546690 23547347 + 0.359431063687663 NA Intergenic CpG -3781 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak1_53_49_-0.171309338874565_5.55820152033744_0.359431063687663-5 chr8 64655627 64656644 + 0.359431063687663 NA intron (NM_013494, intron 1 of 8) B1F2|SINE|Alu 36974 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_234_181_0.0714136027107477_7.54350144155407_0.359409942237543 chr8 85554170 85555938 + 0.359409942237543 NA intron (NM_019794, intron 1 of 8) CpG 217 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak1_85_64_0.116819737607734_6.08077768183232_0.359387569720008 chr2 174472099 174472995 + 0.359387569720008 NA intron (NM_025531, intron 1 of 5) intron (NM_025531, intron 1 of 5) 394 NM_025531 66390 Mm.182294 NM_025531 ENSMUSG00000016257 Prelid3b 2310042G06Rik|AA407013|Slmo2 PRELI domain containing 3B protein-coding common_peak2_84_64_0.100064963488632_6.07240029477277_0.359387569720008 chr1 191396070 191397082 + 0.359387569720008 NA 5' UTR (NM_144880, exon 1 of 13) 5' UTR (NM_144880, exon 1 of 13) 465 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak2_84_64_0.100064963488632_6.07240029477277_0.359387569720008-4 chr9 106685186 106685954 + 0.359387569720008 NA 5' UTR (NM_011573, exon 1 of 6) 5' UTR (NM_011573, exon 1 of 6) 246 NM_011573 21767 Mm.22266 NM_011573 ENSMUSG00000040813 Tex264 TEG-264 testis expressed gene 264 protein-coding common_peak2_84_64_0.100064963488632_6.07240029477277_0.359387569720008-3 chr5 142822686 142823443 + 0.359387569720008 NA Intergenic Intergenic -5677 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_77_70_-0.150428322395358_6.074532958307_0.359387569720008 chr11 77763327 77763971 + 0.359387569720008 NA Intergenic Intergenic -13586 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_85_64_0.116819737607734_6.08077768183232_0.359387569720008 chr1 151342443 151343582 + 0.359387569720008 NA Intergenic Intergenic -1474 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_84_64_0.100064963488632_6.07240029477277_0.359387569720008-2 chr2 4445319 4446298 + 0.359387569720008 NA intron (NM_001177843, intron 2 of 23) intron (NM_001177843, intron 2 of 23) 44832 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_115_88_0.0921246108376241_6.52179573638521_0.359187433159348 chr9 57589139 57590454 + 0.359187433159348 NA TTS (NM_022813) TTS (NM_022813) 344 NM_027895 71742 Mm.155877 NM_027895 ENSMUSG00000032308 Ulk3 1200015E14Rik unc-51-like kinase 3 protein-coding common_peak2_107_95_-0.119470629394241_6.52522718602404_0.359187433159323-2 chr8 12804330 12805688 + 0.359187433159323 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 26910 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA common_peak2_106_95_-0.132796463691998_6.51856426887516_0.359187433159323-2 chrX 94212097 94213247 + 0.359187433159323 NA promoter-TSS (NM_012010) promoter-TSS (NM_012010) -21 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak2_107_95_-0.119470629394241_6.52522718602404_0.359187433159323 chr19 3851842 3852700 + 0.359187433159323 NA exon (NM_013490, exon 1 of 11) exon (NM_013490, exon 1 of 11) 498 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_106_95_-0.132796463691998_6.51856426887516_0.359187433159323 chr6 31146988 31148319 + 0.359187433159323 NA intron (NR_110471, intron 2 of 3) intron (NR_110471, intron 2 of 3) 70821 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_338_263_0.0597092049560075_8.07424872183646_0.359156010497242 chr17 34121332 34123815 + 0.359156010497242 NA promoter-TSS (NM_010386) promoter-TSS (NM_010386) 34 NM_001204973 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_223_192_-0.0819228821958884_7.55149559617014_0.35909767537835 chrX 96129185 96131684 + 0.35909767537835 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 34389 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_191_147_0.0802573420965675_7.24958203667723_0.35908779692976 chr14 43526728 43528778 + 0.35908779692976 NA Intergenic Intergenic 80260 NM_001098269 100042342 Mm.429750 NM_001098269 ENSMUSG00000095528 Gm10375 - predicted gene 10375 protein-coding common_peak1_191_147_0.0802573420965675_7.24958203667723_0.35908779692976-2 chr6 148211133 148212685 + 0.35908779692976 NA promoter-TSS (NR_015615) promoter-TSS (NR_015615) -379 NR_015615 320737 Mm.137858 NR_015615 4732416N19Rik - RIKEN cDNA 4732416N19 gene ncRNA common_peak2_179_156_-0.0973625606115318_7.24593946858586_0.35908779692976 chr18 60734628 60736321 + 0.35908779692976 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) -2333 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_190_147_0.0727768193180669_7.24584177528798_0.35908779692976 chr14 57745279 57746820 + 0.35908779692976 NA promoter-TSS (NM_015771) promoter-TSS (NM_015771) 74 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_179_156_-0.0973625606115318_7.24593946858586_0.35908779692976-3 chr7 140854962 140857099 + 0.35908779692976 NA intron (NM_018742, intron 1 of 3) intron (NM_018742, intron 1 of 3) 353 NM_018742 54399 Mm.155696 NM_018742 ENSMUSG00000025484 Bet1l 2610021K23Rik|Gs15 Bet1 golgi vesicular membrane trafficking protein like protein-coding common_peak2_179_156_-0.0973625606115318_7.24593946858586_0.35908779692976-2 chr5 77357696 77359036 + 0.35908779692976 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 47882 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-3 chr12 69754288 69754813 + 0.358978896303361 NA intron (NM_183294, intron 6 of 9) intron (NM_183294, intron 6 of 9) 9394 NR_030450 751538 NR_030450 ENSMUSG00000076065 Mir681 Mirn681|mmu-mir-681 microRNA 681 ncRNA common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-2 chr10 77212095 77212499 + 0.358978896303361 NA Intergenic Intergenic -45767 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-2 chr13 93191861 93192387 + 0.358978896303361 NA non-coding (NR_154997, exon 1 of 16) non-coding (NR_154997, exon 1 of 16) 293 NM_001361536 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-9 chr7 30588069 30588400 + 0.358978896303361 NA intron (NM_029274, intron 1 of 36) intron (NM_029274, intron 1 of 36) 492 NM_001290573 75410 Mm.168688 NM_029274 ENSMUSG00000006307 Kmt2b 2610014H22Rik|Mll2|Wbp7|mKIAA0304 lysine (K)-specific methyltransferase 2B protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-10 chr3 50001192 50001636 + 0.358978896303361 NA Intergenic Intergenic -244098 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361 chr1 135636480 135636832 + 0.358978896303361 NA Intergenic Intergenic 38880 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-7 chr2 137430402 137430757 + 0.358978896303361 NA Intergenic Intergenic -314059 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361-3 chr11 106722475 106722970 + 0.358978896303361 NA Intergenic Intergenic -7441 NM_001305157 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361-7 chr4 130177425 130177661 + 0.358978896303361 NA Intergenic Intergenic -2421 NM_023476 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-7 chr18 49755856 49756221 + 0.358978896303361 NA promoter-TSS (NM_001170960) promoter-TSS (NM_001170960) -437 NM_026854 68857 Mm.96010 NM_026854 ENSMUSG00000024505 Dtwd2 1190002H09Rik|8030470C17Rik|AI414673|BB115449 DTW domain containing 2 protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-6 chr4 63117845 63118471 + 0.358978896303361 NA intron (NM_028326, intron 11 of 14) intron (NM_028326, intron 11 of 14) 36014 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361-6 chr18 57779473 57779886 + 0.358978896303361 NA non-coding (NR_152224, exon 1 of 4) non-coding (NR_152224, exon 1 of 4) 316 NR_152224 100503033 Mm.381112 NR_152224 Gm19519 - predicted gene, 19519 ncRNA common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-5 chr17 78363091 78363471 + 0.358978896303361 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 54871 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-3 chr11 102320093 102320646 + 0.358978896303361 NA Intergenic Intergenic -1273 NM_011551 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-6 chr17 80797721 80798397 + 0.358978896303361 NA Intergenic Intergenic -70034 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-7 chr6 13052874 13053502 + 0.358978896303361 NA Intergenic Intergenic -16571 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361-2 chr1 92769998 92770406 + 0.358978896303361 NA Intergenic Intergenic -61443 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding unique_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361 chr10 71152538 71153019 + 0.358978896303361 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 6912 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-8 chr7 27804677 27805406 + 0.358978896303361 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -2155 NM_027703 71163 Mm.440493 NM_027703 ENSMUSG00000030604 Zfp626 4833408D11Rik|4933426I21Rik|7630402I04Rik zinc finger protein 626 protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-4 chr13 21453440 21453829 + 0.358978896303361 NA promoter-TSS (NM_001013786) promoter-TSS (NM_001013786) 93 NM_001013786 432731 Mm.390557 NM_001013786 ENSMUSG00000022228 Zscan26 BC068174|Zfp187|Znf187 zinc finger and SCAN domain containing 26 protein-coding common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361-4 chr13 27729705 27730062 + 0.358978896303361 NA Intergenic Intergenic -13146 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-6 chr2 29125094 29125498 + 0.358978896303361 NA 5' UTR (NM_198033, exon 1 of 26) 5' UTR (NM_198033, exon 1 of 26) 304 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361 chr10 128409172 128409604 + 0.358978896303361 NA promoter-TSS (NM_001358973) promoter-TSS (NM_001358973) -208 NM_001358973 69917 Mm.46614 NM_027257 ENSMUSG00000025374 Nabp2 2610036N15Rik|Obfc2b|SSB1 nucleic acid binding protein 2 protein-coding common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361 chr1 75141615 75142199 + 0.358978896303361 NA promoter-TSS (NM_001305231) promoter-TSS (NM_001305231) -216 NM_001356264 69171 Mm.28193 NM_026977 ENSMUSG00000033159 Cnppd1 1810031K17Rik|AU043960 cyclin Pas1/PHO80 domain containing 1 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-4 chr15 27998806 27999196 + 0.358978896303361 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 26847 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-5 chr13 110908338 110908713 + 0.358978896303361 NA TTS (NR_131193) TTS (NR_131193) -4679 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-3 chr15 59759211 59759655 + 0.358978896303361 NA Intergenic Intergenic 35526 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-13 chr5 147075919 147076385 + 0.358978896303361 NA intron (NM_080795, intron 1 of 9) intron (NM_080795, intron 1 of 9) 420 NM_080795 140887 Mm.272203 NM_080795 ENSMUSG00000016520 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 protein-coding common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-4 chr17 35517333 35517899 + 0.358978896303361 NA promoter-TSS (NM_001163764) promoter-TSS (NM_001163764) 500 NM_146248 240084 Mm.49544 NM_146248 ENSMUSG00000040312 Cchcr1 Hcr coiled-coil alpha-helical rod protein 1 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-9 chr2 103669586 103670061 + 0.358978896303361 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 91447 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-5 chr16 24514784 24515238 + 0.358978896303361 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -14303 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_33_32_-0.234563262022002_4.92711248834745_0.358978896303361 chr1 155055110 155055701 + 0.358978896303361 NA Intergenic Intergenic 27859 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361-2 chr11 62005247 62005677 + 0.358978896303361 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 48699 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-8 chr2 59339582 59340028 + 0.358978896303361 NA intron (NM_175464, intron 15 of 20) intron (NM_175464, intron 15 of 20) 46877 NR_040510 76676 Mm.110038 NR_040510 ENSMUSG00000087455 5330411J11Rik - RIKEN cDNA 5330411J11 gene ncRNA unique_peak2_33_32_-0.234563262022002_4.92711248834745_0.358978896303361 chr18 35702482 35703087 + 0.358978896303361 NA intron (NM_029669, intron 1 of 7) intron (NM_029669, intron 1 of 7) 360 NM_029669 76594 Mm.108596 NM_029669 ENSMUSG00000024350 Dnajc18 2700075B01Rik|AU041129 DnaJ heat shock protein family (Hsp40) member C18 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-12 chr3 89998819 89999309 + 0.358978896303361 NA promoter-TSS (NM_001310681) promoter-TSS (NM_001310681) 304 NR_045749 100503469 Mm.440636 NR_045749 ENSMUSG00000105552 Gm19710 - predicted gene, 19710 ncRNA common_peak2_38_28_0.148392781554997_4.93217738590507_0.358978896303361-5 chr14 20248187 20248783 + 0.358978896303361 NA Intergenic Intergenic 20677 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding common_peak1_38_28_0.148392781554997_4.93217738590507_0.358978896303361-11 chr3 68470477 68471154 + 0.358978896303361 NA intron (NM_001282045, intron 1 of 7) intron (NM_001282045, intron 1 of 7) 2632 NM_001282045 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_116_89_0.0883013030071034_6.53600374783323_0.358558402138782 chr18 38418961 38419876 + 0.358558402138782 NA intron (NM_001355749, intron 1 of 7) intron (NM_001355749, intron 1 of 7) 511 NM_001355749 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak2_108_96_-0.121217957058682_6.53930386365779_0.358558402138782 chr2 60700390 60701447 + 0.358558402138782 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 21685 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_117_89_0.10049300941976_6.54209960103955_0.358558402138782 chr15 31224436 31225287 + 0.358558402138782 NA intron (NM_146057, intron 1 of 3) intron (NM_146057, intron 1 of 3) 476 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_86_65_0.111354504246267_6.10007137148159_0.358528808455797-4 chr13 34398396 34399106 + 0.358528808455797 NA Intergenic Intergenic -53569 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_78_71_-0.152357335167036_6.09374633385879_0.358528808455797-3 chr6 108783105 108783647 + 0.358528808455797 NA exon (NM_026011, exon 1 of 7) exon (NM_026011, exon 1 of 7) 317 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding common_peak1_86_65_0.111354504246267_6.10007137148159_0.358528808455797-2 chr12 69986447 69987413 + 0.358528808455797 NA promoter-TSS (NM_022028) promoter-TSS (NM_022028) 72 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak1_86_65_0.111354504246267_6.10007137148159_0.358528808455797 chr10 128302675 128303812 + 0.358528808455797 NA promoter-TSS (NM_001252327) promoter-TSS (NM_001252327) -92 NM_133992 103135 Mm.244183 NM_133992 ENSMUSG00000005682 Pan2 1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710 PAN2 poly(A) specific ribonuclease subunit protein-coding common_peak1_86_65_0.111354504246267_6.10007137148159_0.358528808455797-3 chr12 102469238 102469919 + 0.358528808455797 NA promoter-TSS (NM_013747) promoter-TSS (NM_013747) -332 NM_013747 27277 Mm.273370 NM_013747 ENSMUSG00000021192 Golga5 Ret-II golgi autoantigen, golgin subfamily a, 5 protein-coding common_peak2_78_71_-0.152357335167036_6.09374633385879_0.358528808455797 chr13 76018036 76018601 + 0.358528808455797 NA 5' UTR (NM_178916, exon 1 of 4) 5' UTR (NM_178916, exon 1 of 4) 244 NM_178916 218341 Mm.266515 NM_178916 ENSMUSG00000043190 Rfesd AI256775|D030068K09 Rieske (Fe-S) domain containing protein-coding common_peak1_86_65_0.111354504246267_6.10007137148159_0.358528808455797-5 chr16 87455057 87455927 + 0.358528808455797 NA intron (NM_024258, intron 1 of 17) CpG 507 NM_024258 74112 Mm.152941 NM_024258 ENSMUSG00000025616 Usp16 1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM ubiquitin specific peptidase 16 protein-coding common_peak2_78_71_-0.152357335167036_6.09374633385879_0.358528808455797-2 chr3 58525134 58525752 + 0.358528808455797 NA promoter-TSS (NM_001005509) promoter-TSS (NM_001005509) -378 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak1_78_71_-0.152357335167036_6.09374633385879_0.358528808455797 chr3 41185611 41186358 + 0.358528808455797 NA Intergenic MTEa|LTR|ERVL-MaLR -102938 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_152_117_0.0818040328562759_6.92354506578998_0.358467829391083 chr15 83432372 83433952 + 0.358467829391083 NA promoter-TSS (NM_011862) promoter-TSS (NM_011862) -312 NM_001159510 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_193_149_0.0757368843419535_7.26668713266686_0.358331125237602 chr8 122550123 122551275 + 0.358331125237602 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 630 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak1_60_45_0.123594113245863_5.58535901267994_0.358200417993057 chr7 56050307 56050988 + 0.358200417993057 NA intron (NM_001360080, intron 1 of 92) intron (NM_001360080, intron 1 of 92) 258 NM_001360080 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_60_45_0.123594113245863_5.58535901267994_0.358200417993057 chr1 91458703 91459339 + 0.358200417993057 NA intron (NM_011066, intron 1 of 22) CpG 307 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_60_45_0.123594113245863_5.58535901267994_0.358200417993057-2 chr7 75848383 75849165 + 0.358200417993057 NA intron (NM_029652, intron 1 of 2) intron (NM_029652, intron 1 of 2) 436 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_60_45_0.123594113245863_5.58535901267994_0.358200417993057-3 chr7 105738387 105739063 + 0.358200417993057 NA intron (NM_001161724, intron 2 of 12) intron (NM_001161724, intron 2 of 12) -1340 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak1_54_50_-0.173593040620556_5.58562882166122_0.358200417993044-2 chr14 76703481 76704161 + 0.358200417993044 NA Intergenic Intergenic 26253 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_54_50_-0.173593040620556_5.58562882166122_0.358200417993044-3 chr2 25982407 25983136 + 0.358200417993044 NA intron (NM_001276360, intron 1 of 17) CpG 511 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak2_54_50_-0.173593040620556_5.58562882166122_0.358200417993044-3 chr2 152817462 152818234 + 0.358200417993044 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 10641 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak2_54_50_-0.173593040620556_5.58562882166122_0.358200417993044 chr10 12922252 12923110 + 0.358200417993044 NA non-coding (NR_038027, exon 1 of 4) non-coding (NR_038027, exon 1 of 4) 446 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak2_54_50_-0.173593040620556_5.58562882166122_0.358200417993044-2 chr15 80849416 80850038 + 0.358200417993044 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 51117 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_54_50_-0.173593040620556_5.58562882166122_0.358200417993044 chr12 31654375 31655215 + 0.358200417993044 NA promoter-TSS (NM_028002) promoter-TSS (NM_028002) 31 NM_028002 71916 Mm.62979 NM_028002 ENSMUSG00000020648 Dus4l 2310069P03Rik|2700089B10Rik|AI482040|Pp35 dihydrouridine synthase 4-like (S. cerevisiae) protein-coding common_peak2_54_50_-0.173593040620556_5.58562882166122_0.358200417993044-4 chr4 40852304 40852815 + 0.358200417993044 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 1978 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak1_153_118_0.0789617092900015_6.93429861795294_0.357996857961114 chr8 33641462 33642828 + 0.357996857961114 NA promoter-TSS (NM_178648) promoter-TSS (NM_178648) -169 NM_178648 108159 Mm.29301 NM_178648 ENSMUSG00000052906 Ubxn8 D0H8S2298E|Rep-8|Rep8h|Ubxd6 UBX domain protein 8 protein-coding common_peak1_118_90_0.0966402871386416_6.55611478376802_0.357942835868104 chr14 16365201 16366644 + 0.357942835868104 NA intron (NM_009409, intron 1 of 35) CpG 716 NM_009409 21974 Mm.130362 NM_009409 ENSMUSG00000017485 Top2b D230016L12Rik|Top-2 topoisomerase (DNA) II beta protein-coding common_peak2_109_97_-0.122932522337514_6.55324358294645_0.357942835868104 chr8 24419648 24420179 + 0.357942835868104 NA Intergenic Intergenic 19033 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_118_90_0.0966402871386416_6.55611478376802_0.357942835868104-2 chr16 37777048 37778182 + 0.357942835868104 NA intron (NM_008047, intron 2 of 10) intron (NM_008047, intron 2 of 10) 560 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak2_118_90_0.0966402871386416_6.55611478376802_0.357942835868104 chr3 135422550 135423979 + 0.357942835868104 NA exon (NM_025902, exon 1 of 3) exon (NM_025902, exon 1 of 3) 169 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding common_peak1_330_281_-0.0696590117498399_8.10472184652387_0.357887602994831 chr10 28073901 28076683 + 0.357887602994831 NA intron (NM_001359356, intron 1 of 30) intron (NM_001359356, intron 1 of 30) 472 NM_001359356 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_277_237_-0.074895691498102_7.85736991755889_0.357784398482359 chr4 43393992 43396407 + 0.357784398482359 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -11303 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak2_80_72_-0.136442105752404_6.12160350600382_0.357694962737398 chr2 163348448 163349325 + 0.357694962737398 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 49087 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_79_72_-0.154237575054831_6.1127057713526_0.357694962737398 chr15 76204551 76205227 + 0.357694962737398 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) 1432 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_87_66_0.106031232566044_6.11910480674079_0.357694962737398 chr5 135712635 135713812 + 0.357694962737398 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 22666 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA common_peak1_80_72_-0.136442105752404_6.12160350600382_0.357694962737398 chr1 179802734 179803597 + 0.357694962737398 NA intron (NM_026375, intron 1 of 35) CpG 850 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak2_79_72_-0.154237575054831_6.1127057713526_0.357694962737398-2 chr17 25918718 25919705 + 0.357694962737398 NA intron (NM_139154, intron 2 of 6) CpG 503 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak1_79_72_-0.154237575054831_6.1127057713526_0.357694962737398 chr12 31949583 31950244 + 0.357694962737398 NA intron (NM_177993, intron 1 of 8) CpG 332 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_79_72_-0.154237575054831_6.1127057713526_0.357694962737398-2 chr14 25493729 25494693 + 0.357694962737398 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 35026 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_195_151_0.0713206707759806_7.28358784883158_0.357593926032206 chr8 31523853 31526016 + 0.357593926032206 NA Intergenic Intergenic 157185 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_145_127_-0.102639544007317_6.94868022799634_0.357533548689834 chr8 64541371 64542462 + 0.357533548689834 NA Intergenic Intergenic -27475 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_154_119_0.0761608631248976_6.94497102717097_0.357533548689834 chr8 109692222 109693279 + 0.357533548689834 NA intron (NR_155034, intron 1 of 10) intron (NR_155034, intron 1 of 10) 544 NR_155034 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak1_525_441_-0.054492996422022_8.76065606118042_0.357385897536475 chr16 92620268 92624097 + 0.357385897536475 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 75147 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_119_91_0.0928606299956281_6.56999227105483_0.357340306497258-2 chr12 59218839 59220069 + 0.357340306497258 NA promoter-TSS (NM_001033156) promoter-TSS (NM_001033156) 29 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak1_119_91_0.0928606299956281_6.56999227105483_0.357340306497258 chr10 80149832 80151205 + 0.357340306497258 NA intron (NM_001347117, intron 2 of 7) CpG-1261 836 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak2_119_91_0.0928606299956281_6.56999227105483_0.357340306497258 chr2 59611488 59612618 + 0.357340306497258 NA promoter-TSS (NM_198294) promoter-TSS (NM_198294) 11 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak2_242_188_0.0649206515607519_7.59470275000145_0.357292052018165 chr8 78508283 78509957 + 0.357292052018165 NA promoter-TSS (NM_009033) promoter-TSS (NM_009033) -192 NM_009033 19656 Mm.24718 NM_009033 ENSMUSG00000037070 Rbmxl1 Hnrpg|Rbmx|Rbmxrt RNA binding motif protein, X-linked like-1 protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091 chr13 50957803 50958369 + 0.357106932979091 NA Intergenic Intergenic 142641 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-12 chr9 96800107 96800467 + 0.357106932979091 NA Intergenic Intergenic 34725 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-8 chr6 57812874 57813276 + 0.357106932979091 NA intron (NM_146168, intron 1 of 4) intron (NM_146168, intron 1 of 4) 12050 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091-5 chr2 44926557 44926926 + 0.357106932979091 NA Intergenic CpG -65119 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091-7 chr7 43480460 43480834 + 0.357106932979091 NA exon (NM_001164518, exon 2 of 8) exon (NM_001164518, exon 2 of 8) 9376 NM_001164518 210094 Mm.228087 NM_001164518 ENSMUSG00000013367 Iglon5 A230106M20Rik|Gm1431 IgLON family member 5 protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-3 chr17 13921112 13921498 + 0.357106932979091 NA Intergenic Intergenic -27068 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding common_peak1_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-4 chr5 135544544 135545084 + 0.357106932979091 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 308 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-3 chr2 106974072 106974426 + 0.357106932979091 NA intron (NM_001025102, intron 1 of 4) CpG 148 NM_001025102 212772 Mm.381231 NM_173750 ENSMUSG00000027122 Arl14ep 2700007P21Rik|4930448O08Rik|ARF7EP ADP-ribosylation factor-like 14 effector protein protein-coding common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091-2 chr14 48201804 48202364 + 0.357106932979091 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 3368 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000021846 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_34_33_-0.236106848704535_4.96940941689807_0.357106932979091 chr1 58585609 58586114 + 0.357106932979091 NA promoter-TSS (NM_025597) promoter-TSS (NM_025597) 293 NM_001310599 213056 Mm.26272 NM_172513 ENSMUSG00000038174 Fam126b C130065N10Rik|D1Ertd53e|D630010C10 family with sequence similarity 126, member B protein-coding common_peak1_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-3 chr17 70992722 70993416 + 0.357106932979091 NA TTS (NM_001357820) TTS (NM_001357820) -2553 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091-3 chr16 62854276 62854640 + 0.357106932979091 NA exon (NM_011173, exon 1 of 15) exon (NM_011173, exon 1 of 15) 151 NM_011173 19128 Mm.127156 NM_011173 ENSMUSG00000022912 Pros1 AW214361 protein S (alpha) protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-2 chr17 88441013 88441391 + 0.357106932979091 NA intron (NM_001355742, intron 1 of 5) CpG 498 NM_001355742 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-9 chr7 24460724 24461418 + 0.357106932979091 NA Intergenic Intergenic -1412 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding unique_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091 chr7 99482401 99482970 + 0.357106932979091 NA TTS (NR_002172) TTS (NR_002172) 247 NR_002172 449630 Mm.454449 NR_002172 ENSMUSG00000065822 Snord15a EG449630|Gm5774|RNU15A|Rnu15-a|U15A small nucleolar RNA, C/D box 15A snoRNA common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-10 chr7 27507299 27508029 + 0.357106932979091 NA intron (NM_019412, intron 4 of 5) intron (NM_019412, intron 4 of 5) 8340 NM_019412 19153 Mm.10119 NM_019412 ENSMUSG00000053198 Prx L-Periaxin periaxin protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-8 chr7 118533132 118533735 + 0.357106932979091 NA promoter-TSS (NM_001304758) promoter-TSS (NM_001304758) -77 NM_009940 12850 Mm.20634 NM_009940 ENSMUSG00000030652 Coq7 clk-1 demethyl-Q 7 protein-coding unique_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-2 chr9 77750254 77750610 + 0.357106932979091 NA Intergenic Intergenic -4103 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-7 chr5 110135898 110136377 + 0.357106932979091 NA exon (NM_172717, exon 2 of 18) exon (NM_172717, exon 2 of 18) 307 NM_001289580 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding unique_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091 chr15 99040326 99041139 + 0.357106932979091 NA Intergenic Intergenic 10841 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-9 chr8 122990225 122990618 + 0.357106932979091 NA intron (NM_001081379, intron 1 of 12) intron (NM_001081379, intron 1 of 12) 51863 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-6 chr3 145799165 145799598 + 0.357106932979091 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 40689 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091 chr11 61973053 61973422 + 0.357106932979091 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 16474 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-4 chr18 24709389 24710020 + 0.357106932979091 NA exon (NM_175276, exon 1 of 27) exon (NM_175276, exon 1 of 27) 1081 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-2 chr11 33861104 33861816 + 0.357106932979091 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -17875 NM_001290690 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-2 chr17 45735835 45736676 + 0.357106932979091 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 1749 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-6 chr7 29505320 29505867 + 0.357106932979091 NA promoter-TSS (NM_001081028) promoter-TSS (NM_001081028) -133 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-5 chr3 81377797 81378328 + 0.357106932979091 NA Intergenic Intergenic 341646 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-5 chr3 54432179 54432754 + 0.357106932979091 NA Intergenic Intergenic 71359 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-11 chr8 126881334 126881789 + 0.357106932979091 NA Intergenic Intergenic 32541 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-4 chr3 10440108 10440356 + 0.357106932979091 NA promoter-TSS (NM_029068) promoter-TSS (NM_029068) -102 NM_001127191 74718 Mm.440548 NM_029068 ENSMUSG00000027534 Snx16 4930522N22Rik|AI117577|AI747675 sorting nexin 16 protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-7 chr7 70037482 70038026 + 0.357106932979091 NA Intergenic Intergenic 300068 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091-4 chr2 30446710 30447195 + 0.357106932979091 NA 3' UTR (NM_138748, exon 10 of 10) 3' UTR (NM_138748, exon 10 of 10) 27247 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091 chr11 96776613 96777240 + 0.357106932979091 NA intron (NM_028965, intron 2 of 8) intron (NM_028965, intron 2 of 8) 629 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_34_33_-0.236106848704535_4.96940941689807_0.357106932979091-5 chr8 13530528 13530918 + 0.357106932979091 NA Intergenic Intergenic 31738 NM_025601 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak2_39_29_0.135751367789911_4.97476627950347_0.357106932979091-6 chr4 32249916 32250210 + 0.357106932979091 NA Intergenic Intergenic -167372 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_39_29_0.135751367789911_4.97476627950347_0.357106932979091-2 chr14 7809210 7809668 + 0.357106932979091 NA Intergenic Intergenic -8518 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_156_120_0.0825540737498116_6.9601402741495_0.357077716071707 chr9 110116995 110118417 + 0.357077716071707 NA promoter-TSS (NM_001252682) promoter-TSS (NM_001252682) -90 NM_001252682 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-3 chr19 16781258 16781682 + 0.357020589591567 NA promoter-TSS (NM_173028) promoter-TSS (NM_173028) -537 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-2 chr7 30168932 30169634 + 0.357020589591567 NA promoter-TSS (NM_001033540) promoter-TSS (NM_001033540) 458 NM_011980 26465 Mm.446516 NM_011980 ENSMUSG00000037029 Zfp146 OZF|Znf146 zinc finger protein 146 protein-coding common_peak2_61_46_0.115860687875144_5.61251919561521_0.357020589591567 chr7 15945502 15946073 + 0.357020589591567 NA intron (NM_133831, intron 1 of 12) CpG 321 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Nop53 5330430H08Rik|9430097C02Rik|AU041936|AW536441|Gltscr2|PICT-1|R74911 NOP53 ribosome biogenesis factor protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-6 chr5 140768658 140769453 + 0.357020589591567 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 44928 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-7 chr8 119801519 119801721 + 0.357020589591567 NA Intergenic Intergenic -23204 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-4 chr2 30061870 30062668 + 0.357020589591567 NA exon (NM_023871, exon 1 of 8) exon (NM_023871, exon 1 of 8) 273 NM_023871 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567 chr10 19010089 19011109 + 0.357020589591567 NA intron (NM_001166402, intron 1 of 7) intron (NM_001166402, intron 1 of 7) 1364 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-5 chr5 52834158 52834639 + 0.357020589591567 NA intron (NM_024213, intron 1 of 27) intron (NM_024213, intron 1 of 27) 263 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding unique_peak1_61_46_0.115860687875144_5.61251919561521_0.357020589591567 chr15 7862085 7862757 + 0.357020589591567 NA Intergenic Intergenic 46871 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_55_51_-0.175795603922412_5.61254191617989_0.357020589591567 chr11 70000640 70001368 + 0.357020589591567 NA TTS (NM_001291127) TTS (NM_001291127) 378 NM_007888 13543 Mm.5114 NM_007888 ENSMUSG00000020888 Dvl2 - dishevelled segment polarity protein 2 protein-coding common_peak1_61_46_0.115860687875144_5.61251919561521_0.357020589591567 chr9 108264039 108264869 + 0.357020589591567 NA promoter-TSS (NM_001276481) promoter-TSS (NM_001276481) -496 NM_001276485 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding common_peak2_55_51_-0.175795603922412_5.61254191617989_0.357020589591567-2 chr14 30549149 30549669 + 0.357020589591567 NA intron (NM_009388, intron 1 of 13) CpG 278 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding unique_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225 chr19 55440863 55441188 + 0.356936432242225 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 124968 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-14 chr4 129377556 129377892 + 0.356936432242225 NA intron (NM_028603, intron 1 of 4) GC_rich|Low_complexity|Low_complexity 304 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding unique_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-3 chrX 163908450 163908762 + 0.356936432242225 NA promoter-TSS (NM_026887) promoter-TSS (NM_026887) -411 NM_001290378 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-20 chr7 139844021 139844359 + 0.356936432242225 NA intron (NM_177469, intron 3 of 7) intron (NM_177469, intron 3 of 7) 10016 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-5 chr13 42328355 42328591 + 0.356936432242225 NA Intergenic Intergenic 26997 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-5 chr18 4522253 4522598 + 0.356936432242225 NA Intergenic Intergenic -112504 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-13 chr6 97511187 97511491 + 0.356936432242225 NA intron (NM_145148, intron 2 of 23) intron (NM_145148, intron 2 of 23) -23519 NM_001346637 232288 Mm.27789 NM_145148 ENSMUSG00000030064 Frmd4b 6030440G05Rik|C87375|GOBLIN|GRSP1|R74720 FERM domain containing 4B protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-7 chr13 43560506 43560940 + 0.356936432242225 NA promoter-TSS (NM_001081059) promoter-TSS (NM_001081059) -532 NM_001081059 76137 Mm.426290 NM_001081059 ENSMUSG00000021371 Mcur1 6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a mitochondrial calcium uniporter regulator 1 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-2 chr14 43346264 43346586 + 0.356936432242225 NA intron (NM_027940, intron 2 of 4) intron (NM_027940, intron 2 of 4) 1386 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-24 chr9 77754641 77754890 + 0.356936432242225 NA non-coding (NR_151778, exon 1 of 17) non-coding (NR_151778, exon 1 of 17) 230 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-11 chr16 45968452 45968682 + 0.356936432242225 NA intron (NR_152226, intron 2 of 2) intron (NR_152226, intron 2 of 2) 22961 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-2 chr10 63382295 63382629 + 0.356936432242225 NA promoter-TSS (NM_001253685) promoter-TSS (NM_001253685) 19 NM_001253685 30045 Mm.32550 NM_013888 ENSMUSG00000036764 Dnajc12 Jdp1|mJDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-20 chr7 19002650 19002889 + 0.356936432242225 NA Intergenic Intergenic -1296 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-7 chr2 180226872 180227389 + 0.356936432242225 NA Intergenic Intergenic -1271 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-16 chr3 64996170 64996567 + 0.356936432242225 NA intron (NM_001357358, intron 1 of 13) intron (NM_001357358, intron 1 of 13) 47156 NM_001357358 16497 Mm.316402 NM_010597 ENSMUSG00000027827 Kcnab1 Akr8a8|Kvbeta1.1|mKv(beta)1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-3 chr15 59544102 59544504 + 0.356936432242225 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -104351 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-12 chr2 126311125 126311390 + 0.356936432242225 NA Intergenic Intergenic 159116 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-4 chr16 45039134 45039444 + 0.356936432242225 NA Intergenic Intergenic -54722 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-9 chr16 24515525 24515801 + 0.356936432242225 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -13651 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-2 chr10 111582744 111583063 + 0.356936432242225 NA Intergenic Intergenic 11370 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-13 chr17 75250619 75251029 + 0.356936432242225 NA intron (NM_019919, intron 8 of 33) intron (NM_019919, intron 8 of 33) 72043 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-9 chr4 45456959 45457447 + 0.356936432242225 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -48437 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-4 chr12 31951104 31951494 + 0.356936432242225 NA Intergenic Intergenic -1054 NM_001361928 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225 chr1 78273410 78273756 + 0.356936432242225 NA Intergenic Intergenic -36763 NM_001004173 433323 Mm.276248 NM_001004173 ENSMUSG00000032908 Sgpp2 SPPase2|Spp2 sphingosine-1-phosphate phosphotase 2 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-13 chr4 11763718 11764149 + 0.356936432242225 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 5776 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-23 chr9 32750267 32750558 + 0.356936432242225 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 54370 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-10 chr4 152410606 152411009 + 0.356936432242225 NA intron (NM_010598, intron 5 of 15) intron (NM_010598, intron 5 of 15) 38048 NM_001252655 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-16 chrX 96109364 96109856 + 0.356936432242225 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 13565 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-15 chr2 167761922 167762162 + 0.356936432242225 NA Intergenic Intergenic 70865 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-23 chr9 120776925 120777242 + 0.356936432242225 NA Intergenic Intergenic 138167 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-19 chr5 143548901 143549151 + 0.356936432242225 NA 5' UTR (NM_026050, exon 1 of 3) 5' UTR (NM_026050, exon 1 of 3) 320 NM_026050 67238 Mm.383219 NM_026050 ENSMUSG00000083012 Fam220a 1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar family with sequence similarity 220, member A protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-14 chr19 46572754 46572983 + 0.356936432242225 NA promoter-TSS (NM_053196) promoter-TSS (NM_053196) 314 NM_001355233 56350 Mm.22085 NM_019718 ENSMUSG00000025035 Arl3 - ADP-ribosylation factor-like 3 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-18 chr4 33247129 33247350 + 0.356936432242225 NA intron (NM_001033225, intron 1 of 1) intron (NM_001033225, intron 1 of 1) 1548 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-10 chr17 29092168 29092603 + 0.356936432242225 NA intron (NM_001111099, intron 1 of 2) PB1D7|SINE|Alu -1384 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-11 chr5 96792761 96793139 + 0.356936432242225 NA promoter-TSS (NM_013470) promoter-TSS (NM_013470) -435 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-3 chr11 96311966 96312194 + 0.356936432242225 NA Intergenic Intergenic -5085 NR_029784 723893 NR_029784 ENSMUSG00000065519 Mir10a Mirn10a|miR-10a|mmu-mir-10a microRNA 10a ncRNA common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-19 chr7 116208567 116208944 + 0.356936432242225 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -10194 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-3 chr11 53324582 53324869 + 0.356936432242225 NA promoter-TSS (NM_026479) promoter-TSS (NM_026479) 36 NM_026479 67966 Mm.288072 NM_026479 ENSMUSG00000018239 Zcchc10 2410141K03Rik|AA675321|D11Ertd416e zinc finger, CCHC domain containing 10 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-4 chr11 60416771 60416990 + 0.356936432242225 NA promoter-TSS (NM_025757) promoter-TSS (NM_025757) 219 NM_145427 246782 Mm.41651 NM_145427 ENSMUSG00000042709 Atpaf2 ATP12|ATP12p ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-22 chr9 101035032 101035303 + 0.356936432242225 NA promoter-TSS (NM_025835) promoter-TSS (NM_025835) -283 NM_025835 66904 Mm.335385 NM_025835 ENSMUSG00000032527 Pccb 1300012P06Rik|AI314687|R74805 propionyl Coenzyme A carboxylase, beta polypeptide protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225 chr1 158605849 158606072 + 0.356936432242225 NA intron (NM_007495, intron 14 of 22) C-rich|Low_complexity|Low_complexity 100335 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-11 chr19 28246168 28246457 + 0.356936432242225 NA Intergenic Intergenic -235146 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-8 chr14 76520294 76520554 + 0.356936432242225 NA intron (NR_045660, intron 1 of 3) intron (NR_045660, intron 1 of 3) 431 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-21 chr8 94997059 94997411 + 0.356936432242225 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 12836 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-18 chr7 113144822 113145123 + 0.356936432242225 NA Intergenic Intergenic -2957 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA unique_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-2 chr5 124899785 124900070 + 0.356936432242225 NA Intergenic Intergenic 37222 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-10 chr15 53678695 53678991 + 0.356936432242225 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -64564 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-6 chr19 46471153 46471603 + 0.356936432242225 NA intron (NM_001025391, intron 8 of 11) intron (NM_001025391, intron 8 of 11) -30270 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225 chr13 51849589 51849981 + 0.356936432242225 NA Intergenic Intergenic 3110 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-21 chr9 78623106 78623335 + 0.356936432242225 NA intron (NM_153098, intron 2 of 32) intron (NM_153098, intron 2 of 32) 7674 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-16 chr5 24824074 24824355 + 0.356936432242225 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 18147 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-12 chr17 47267421 47267678 + 0.356936432242225 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 37319 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-8 chr15 79688354 79688722 + 0.356936432242225 NA promoter-TSS (NM_028792) promoter-TSS (NM_028792) -666 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-7 chr13 71148532 71148901 + 0.356936432242225 NA Intergenic Intergenic 41627 NR_130325 100316804 NR_130325 ENSMUSG00000080580 Mir466f-4 Mirn466f-4|mmu-mir-466f-4 microRNA 466f-4 ncRNA common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-5 chr12 17223004 17223417 + 0.356936432242225 NA Intergenic Intergenic -43385 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-22 chr8 110813183 110813456 + 0.356936432242225 NA intron (NM_133953, intron 22 of 25) intron (NM_133953, intron 22 of 25) -7395 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-15 chr4 150799437 150799655 + 0.356936432242225 NA Intergenic Intergenic -54250 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-17 chr5 140517978 140518282 + 0.356936432242225 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 12521 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-9 chr14 120373966 120374232 + 0.356936432242225 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 67647 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-15 chr9 63744333 63744690 + 0.356936432242225 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 13483 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-8 chr3 52578255 52578690 + 0.356936432242225 NA Intergenic Intergenic 61508 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-6 chr12 84920085 84920353 + 0.356936432242225 NA 3' UTR (NM_178065, exon 20 of 20) 3' UTR (NM_178065, exon 20 of 20) -43724 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-12 chr6 52224845 52225180 + 0.356936432242225 NA intron (NM_001277238, intron 2 of 2) intron (NM_001277238, intron 2 of 2) 2358 NM_010456 15405 Mm.4694 NM_010456 ENSMUSG00000038227 Hoxa9 D6a9|Hox-1.7 homeobox A9 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-6 chr13 49706462 49706676 + 0.356936432242225 NA intron (NM_172015, intron 13 of 33) intron (NM_172015, intron 13 of 33) 24439 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding unique_peak1_22_16_0.16244544011916_4.16868556130992_0.356936432242225-14 chr8 25532211 25532546 + 0.356936432242225 NA exon (NM_010206, exon 2 of 18) exon (NM_010206, exon 2 of 18) 13619 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_22_16_0.16244544011916_4.16868556130992_0.356936432242225-17 chr3 121615522 121615889 + 0.356936432242225 NA Intergenic Intergenic 27780 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-16 chr8 41133549 41133984 + 0.356936432242222 NA promoter-TSS (NM_001005863) promoter-TSS (NM_001005863) -40 NM_001005863 102103 Mm.149438 NM_001005863 ENSMUSG00000045636 Mtus1 AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288 mitochondrial tumor suppressor 1 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-6 chr14 20149764 20150062 + 0.356936432242222 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 31869 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-19 chrX 141475490 141475838 + 0.356936432242222 NA 5' UTR (NM_001163155, exon 1 of 51) 5' UTR (NM_001163155, exon 1 of 51) 245 NM_001163155 12830 Mm.286892 NM_007736 ENSMUSG00000031274 Col4a5 - collagen, type IV, alpha 5 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-7 chr16 32666059 32666349 + 0.356936432242222 NA non-coding (NR_033493, exon 2 of 3) non-coding (NR_033493, exon 2 of 3) 1993 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA unique_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222 chr9 56950523 56950810 + 0.356936432242222 NA promoter-TSS (NM_178374) promoter-TSS (NM_178374) -258 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-5 chr13 63246103 63246481 + 0.356936432242222 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 6263 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-6 chr13 42351409 42351659 + 0.356936432242222 NA Intergenic Intergenic 50058 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-18 chr9 106453374 106453631 + 0.356936432242222 NA promoter-TSS (NM_021567) promoter-TSS (NM_021567) -336 NM_021567 59092 Mm.286394 NM_021567 ENSMUSG00000023495 Pcbp4 1200003L19Rik|AlphaCP-4 poly(rC) binding protein 4 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-9 chr3 32615637 32616000 + 0.356936432242222 NA intron (NM_001348104, intron 1 of 10) intron (NM_001348104, intron 1 of 10) 349 NM_001348062 14696 Mm.139192 NM_013531 ENSMUSG00000027669 Gnb4 6720453A21Rik|G(beta)4 guanine nucleotide binding protein (G protein), beta 4 protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222 chr12 35259312 35259757 + 0.356936432242222 NA Intergenic Intergenic -64637 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-2 chr11 95106190 95106535 + 0.356936432242222 NA Intergenic Intergenic -13755 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-11 chr2 10048387 10048623 + 0.356936432242222 NA 5' UTR (NM_027748, exon 1 of 7) 5' UTR (NM_027748, exon 1 of 7) 104 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-8 chr17 26497044 26497296 + 0.356936432242222 NA Intergenic Intergenic 11302 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-17 chr8 71543009 71543271 + 0.356936432242222 NA exon (NM_028617, exon 2 of 9) exon (NM_028617, exon 2 of 9) 210 NM_028617 73711 Mm.307770 NM_028617 ENSMUSG00000031813 Mvb12a 1110012M11Rik|Fam125a multivesicular body subunit 12A protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-4 chr12 98575171 98575433 + 0.356936432242222 NA promoter-TSS (NM_001316666) promoter-TSS (NM_001316666) -175 NM_001316664 72258 Mm.196158 NM_029911 ENSMUSG00000033854 Kcnk10 1700024D23Rik|3010005K24Rik|Trek2 potassium channel, subfamily K, member 10 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-10 chr7 81829589 81829798 + 0.356936432242222 NA promoter-TSS (NM_146193) promoter-TSS (NM_146193) -262 NM_146193 83962 Mm.439893 NM_146193 ENSMUSG00000025103 Btbd1 1190005H08Rik BTB (POZ) domain containing 1 protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-8 chr3 80976178 80976436 + 0.356936432242222 NA Intergenic Intergenic -60109 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-4 chr13 34096972 34097371 + 0.356936432242222 NA intron (NR_046184, intron 2 of 4) intron (NR_046184, intron 2 of 4) 16101 NR_046184 432745 Mm.159104 NR_046184 ENSMUSG00000113591 4930447K03Rik - RIKEN cDNA 4930447K03 gene ncRNA common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-9 chr17 43130633 43131009 + 0.356936432242222 NA Intergenic Intergenic 27470 NR_045155 545207 Mm.329050 NR_045153 E130008D07Rik - RIKEN cDNA E130008D07 gene ncRNA unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-4 chr18 38017221 38017576 + 0.356936432242222 NA Intergenic Intergenic -18429 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-7 chr13 110925627 110925833 + 0.356936432242222 NA Intergenic MIRc|SINE|MIR -21884 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-3 chr13 17696057 17696288 + 0.356936432242222 NA intron (NM_025479, intron 1 of 1) intron (NM_025479, intron 1 of 1) 759 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-9 chr6 72316319 72316679 + 0.356936432242222 NA Intergenic RLTR25B|LTR|ERVK 11889 NM_147779 20388 Mm.46033 NM_147779 ENSMUSG00000056370 Sftpb AI562151|SF-B|SP-B|Sftp-3|Sftp3 surfactant associated protein B protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-5 chr19 40588066 40588374 + 0.356936432242222 NA intron (NM_153554, intron 1 of 18) CpG 243 NM_019698 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-12 chr2 154389744 154390148 + 0.356936432242222 NA intron (NM_009228, intron 2 of 7) B3A|SINE|B2 -17227 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-2 chr11 76286990 76287306 + 0.356936432242222 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 43412 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-15 chr7 116457374 116457775 + 0.356936432242222 NA Intergenic Intergenic -14116 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-6 chr2 59824651 59824949 + 0.356936432242222 NA intron (NM_001290659, intron 18 of 25) intron (NM_001290659, intron 18 of 25) 57806 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-3 chr12 81594524 81594760 + 0.356936432242222 NA intron (NM_001347386, intron 1 of 8) intron (NM_001347386, intron 1 of 8) 366 NM_001347385 69792 Mm.279993 NM_027213 ENSMUSG00000002679 Med6 1500012F11Rik|AU019660|AV213303 mediator complex subunit 6 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222 chr1 92799373 92799642 + 0.356936432242222 NA Intergenic Intergenic -32138 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-14 chr7 94153652 94153943 + 0.356936432242222 NA Intergenic Intergenic -969621 NM_001358087 100040298 Mm.260904 NM_001358087 Gm15501 EyeLinc5 predicted pseudogene 15501 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-5 chr13 28916507 28916910 + 0.356936432242222 NA Intergenic Intergenic -31286 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-2 chr14 8099416 8099785 + 0.356936432242222 NA intron (NM_001360314, intron 1 of 19) intron (NM_001360314, intron 1 of 19) 1389 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-7 chr3 65134322 65134847 + 0.356936432242222 NA non-coding (NR_126080, exon 5 of 5) non-coding (NR_126080, exon 5 of 5) 25570 NM_010597 16497 Mm.316402 NM_010597 ENSMUSG00000027827 Kcnab1 Akr8a8|Kvbeta1.1|mKv(beta)1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 protein-coding unique_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-3 chr15 95379266 95379736 + 0.356936432242222 NA intron (NM_001356950, intron 12 of 20) intron (NM_001356950, intron 12 of 20) 148513 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-10 chr17 59012969 59013266 + 0.356936432242222 NA TTS (NR_145522) TTS (NR_145522) 205 NM_026497 67993 Mm.36507 NM_026497 ENSMUSG00000024228 Nudt12 0610016O18Rik nudix (nucleoside diphosphate linked moiety X)-type motif 12 protein-coding common_peak2_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-13 chr6 50395986 50396290 + 0.356936432242222 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -13301 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222 chr1 134414820 134415207 + 0.356936432242222 NA promoter-TSS (NM_001306069) promoter-TSS (NM_001306069) -365 NM_028320 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-8 chr2 118658618 118658997 + 0.356936432242222 NA Intergenic Intergenic -4770 NM_001033254 214230 Mm.241857 NM_001033254 ENSMUSG00000074923 Pak6 4732456M09 p21 (RAC1) activated kinase 6 protein-coding common_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-11 chr8 69974702 69974966 + 0.356936432242222 NA promoter-TSS (NM_001113346) promoter-TSS (NM_001113346) -451 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak1_18_19_-0.345709660768971_4.14907326450288_0.356936432242222-2 chrX 98867469 98867864 + 0.356936432242222 NA intron (NM_001313755, intron 2 of 23) intron (NM_001313755, intron 2 of 23) 23359 NM_052976 94190 Mm.33536 NM_052976 ENSMUSG00000031214 Ophn1 C130037N19Rik|Wtgr oligophrenin 1 protein-coding common_peak1_81_73_-0.138493798028512_6.14020646661469_0.356884963416664-2 chr16 17722566 17722987 + 0.356884963416664 NA exon (NM_033609, exon 1 of 18) exon (NM_033609, exon 1 of 18) 124 NM_001285886 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak1_88_67_0.100844385149588_6.13788503382513_0.356884963416664 chr7 45465872 45466890 + 0.356884963416664 NA intron (NM_007527, intron 1 of 5) intron (NM_007527, intron 1 of 5) 517 NM_007527 12028 Mm.19904 NM_007527 ENSMUSG00000003873 Bax - BCL2-associated X protein protein-coding common_peak1_81_73_-0.138493798028512_6.14020646661469_0.356884963416664 chr10 43694268 43695263 + 0.356884963416664 NA Intergenic Intergenic -51393 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_81_73_-0.138493798028512_6.14020646661469_0.356884963416664-2 chr4 148524055 148524609 + 0.356884963416664 NA intron (NM_020009, intron 31 of 57) intron (NM_020009, intron 31 of 57) -23870 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak2_81_73_-0.138493798028512_6.14020646661469_0.356884963416664 chr4 14863649 14864670 + 0.356884963416664 NA promoter-TSS (NM_028264) promoter-TSS (NM_028264) -60 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360|Pip4p2 transmembrane protein 55A protein-coding common_peak1_187_162_-0.0891768100755108_7.30413974919332_0.356875457092724 chr15 99701579 99703474 + 0.356875457092724 NA intron (NM_031842, intron 1 of 12) GC_rich|Low_complexity|Low_complexity 239 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding common_peak2_112_99_-0.113533488114473_6.58708944571749_0.356750404116971 chr15 82898670 82899683 + 0.356750404116971 NA promoter-TSS (NR_027799) promoter-TSS (NR_027799) 96 NR_045068 100504637 Mm.440928 NR_045068 ENSMUSG00000100199 Gm20324 - predicted gene, 20324 ncRNA common_peak2_112_99_-0.113533488114473_6.58708944571749_0.356750404116971-2 chr19 12794563 12795450 + 0.356750404116971 NA non-coding (NR_024093, exon 1 of 13) non-coding (NR_024093, exon 1 of 13) 1117 NR_024093 664779 Mm.290924 NM_001039718 ENSMUSG00000024695 Gm44505 Zfp91-Cntf|Zfp91Cntf predicted readthrough transcript (NMD candidate), 44505 ncRNA common_peak1_112_99_-0.113533488114473_6.58708944571749_0.356750404116971 chr1 184731532 184732486 + 0.356750404116971 NA exon (NM_008250, exon 1 of 4) exon (NM_008250, exon 1 of 4) 484 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox protein-coding common_peak1_111_99_-0.126267055129288_6.58072266221008_0.356750404116971 chr17 27622594 27623808 + 0.356750404116971 NA promoter-TSS (NM_001291046) promoter-TSS (NM_001291046) -237 NM_001291046 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding common_peak1_111_99_-0.126267055129288_6.58072266221008_0.356750404116971-2 chr5 137080708 137081852 + 0.356750404116971 NA Intergenic (GGAGA)n|Simple_repeat|Simple_repeat -9008 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_111_99_-0.126267055129288_6.58072266221008_0.356750404116971 chr15 76343261 76344487 + 0.356750404116971 NA intron (NM_025567, intron 1 of 6) CpG 351 NM_025567 66445 Mm.29196 NM_025567 ENSMUSG00000022551 Cyc1 2610002H19Rik|AA408921|Cyct1 cytochrome c-1 protein-coding common_peak2_157_121_0.0797753491391457_6.97062501213246_0.356629180543539-3 chr9 7183921 7185494 + 0.356629180543539 NA 5' UTR (NM_001357483, exon 1 of 7) 5' UTR (NM_001357483, exon 1 of 7) 202 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding common_peak2_157_121_0.0797753491391457_6.97062501213246_0.356629180543539 chr4 136469800 136470933 + 0.356629180543539 NA intron (NM_024452, intron 1 of 4) CpG 605 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak2_157_121_0.0797753491391457_6.97062501213246_0.356629180543539-2 chr7 133708173 133709842 + 0.356629180543539 NA promoter-TSS (NM_025392) promoter-TSS (NM_025392) 288 NM_009479 22276 Mm.3160 NM_009479 ENSMUSG00000030979 Uros AI415298|UROIIIS|Uros3 uroporphyrinogen III synthase protein-coding common_peak1_199_154_0.0720644977315823_7.31215665414003_0.356523024779342 chr15 102954229 102956553 + 0.356523024779342 NA intron (NM_001024842, intron 1 of 1) intron (NM_001024842, intron 1 of 1) 865 NM_001024842 109663 Mm.37692 NM_001024842 ENSMUSG00000001656 Hoxc11 Hox-3.7 homeobox C11 protein-coding common_peak2_149_130_-0.0973435167309313_6.98475124317198_0.356187768246131 chr19 53412380 53413492 + 0.356187768246131 NA Intergenic B1_Mur1|SINE|Alu -22302 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_149_130_-0.0973435167309313_6.98475124317198_0.356187768246131-2 chr2 113375885 113378093 + 0.356187768246131 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 49253 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_148_130_-0.106925605012184_6.97996019903136_0.356187768246131 chr13 9763458 9765074 + 0.356187768246131 NA promoter-TSS (NM_001347476) promoter-TSS (NM_001347476) 204 NM_001347470 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak2_113_100_-0.115267405552438_6.60057777997558_0.356172735828017 chr13 110913206 110915105 + 0.356172735828017 NA Intergenic Intergenic -10309 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_235_202_-0.0800447910089854_7.62531352168068_0.356149427295941 chr2 83723348 83725970 + 0.356149427295941 NA 5' UTR (NM_008402, exon 1 of 30) 5' UTR (NM_008402, exon 1 of 30) 262 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_82_74_-0.140495069604962_6.1585711556934_0.356097801671622 chr8 105325805 105326603 + 0.356097801671622 NA promoter-TSS (NM_177449) promoter-TSS (NM_177449) 72 NM_177449 234684 Mm.381717 NM_177449 ENSMUSG00000041679 Lrrc29 A630024J02Rik|FBL9|FBXL9 leucine rich repeat containing 29 protein-coding common_peak2_89_68_0.0957887110751701_6.15641881231575_0.356097801671622-3 chr9 102783011 102783862 + 0.356097801671622 NA Intergenic Intergenic 43788 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_89_68_0.0957887110751701_6.15641881231575_0.356097801671622-2 chr8 90869241 90870450 + 0.356097801671622 NA intron (NM_177224, intron 2 of 39) MIR|SINE|MIR 41010 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_89_68_0.0957887110751701_6.15641881231575_0.356097801671622-2 chr11 93967299 93968332 + 0.356097801671622 NA intron (NM_008704, intron 1 of 4) intron (NM_008704, intron 1 of 4) 706 NM_008704 18102 Mm.439702 NM_008704 ENSMUSG00000037601 Nme1 AL024257|NDPK-A|NM23-M1|NM23A NME/NM23 nucleoside diphosphate kinase 1 protein-coding common_peak2_89_68_0.0957887110751701_6.15641881231575_0.356097801671622 chr3 93520519 93521257 + 0.356097801671622 NA intron (NM_016740, intron 1 of 2) CpG 392 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak1_89_68_0.0957887110751701_6.15641881231575_0.356097801671622 chr10 29361398 29362279 + 0.356097801671622 NA intron (NM_001110198, intron 1 of 3) CpG 604 NM_026518 68031 Mm.28930 NM_026518 ENSMUSG00000038876 Rnf146 2610509H23Rik|Iduna ring finger protein 146 protein-coding common_peak2_56_52_-0.177921397790597_5.6389597556679_0.355888493228951-2 chr5 136051905 136052598 + 0.355888493228951 NA Intergenic B3A|SINE|B2 -5016 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak1_56_52_-0.177921397790597_5.6389597556679_0.355888493228951-2 chr12 99337139 99337543 + 0.355888493228951 NA intron (NM_183186, intron 3 of 5) intron (NM_183186, intron 3 of 5) 112733 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_62_47_0.108407797525678_5.639166399484_0.355888493228951-3 chr4 82859191 82859983 + 0.355888493228951 NA promoter-TSS (NM_026647) promoter-TSS (NM_026647) 86 NR_149737 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding common_peak1_62_47_0.108407797525678_5.639166399484_0.355888493228951 chr15 38937379 38937943 + 0.355888493228951 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 3752 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_62_47_0.108407797525678_5.639166399484_0.355888493228951-2 chr17 34123000 34123497 + 0.355888493228951 NA promoter-TSS (NM_001204973) promoter-TSS (NM_001204973) 416 NM_010386 14998 Mm.16373 NM_010386 ENSMUSG00000037649 H2-DMa H-2Ma|H2-Ma histocompatibility 2, class II, locus DMa protein-coding common_peak1_62_47_0.108407797525678_5.639166399484_0.355888493228951-2 chr4 11485996 11486602 + 0.355888493228951 NA intron (NM_001081183, intron 1 of 24) CpG 341 NM_001347055 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 Virma 1110037F02Rik|4930422M05Rik|Kiaa1429|mKIAA1429 vir like m6A methyltransferase associated protein-coding common_peak2_56_52_-0.177921397790597_5.6389597556679_0.355888493228951-3 chr9 25591144 25592004 + 0.355888493228951 NA intron (NM_026189, intron 6 of 7) intron (NM_026189, intron 6 of 7) 109977 NM_026189 67484 Mm.112977 NM_026189 ENSMUSG00000036611 Eepd1 2310005P05Rik|AI481005 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding common_peak1_56_52_-0.177921397790597_5.6389597556679_0.355888493228951 chr11 6475184 6475715 + 0.355888493228951 NA exon (NM_011221, exon 1 of 1) exon (NM_011221, exon 1 of 1) 627 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak2_62_47_0.108407797525678_5.639166399484_0.355888493228951-5 chr8 123654066 123654630 + 0.355888493228951 NA intron (NM_133955, intron 1 of 2) CpG 419 NM_133955 69581 Mm.168257 NM_133955 ENSMUSG00000039960 Rhou 2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K ras homolog family member U protein-coding unique_peak1_62_47_0.108407797525678_5.639166399484_0.355888493228951 chr8 3418410 3419549 + 0.355888493228951 NA intron (NM_133962, intron 1 of 19) B3A|SINE|B2 25971 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_62_47_0.108407797525678_5.639166399484_0.355888493228951-4 chr4 89128458 89129207 + 0.355888493228951 NA promoter-TSS (NR_151607) promoter-TSS (NR_151607) -606 NR_151607 102637941 Mm.366358 NR_151607 Gm12602 - predicted gene 12602 ncRNA common_peak2_56_52_-0.177921397790597_5.6389597556679_0.355888493228951 chr4 54865340 54866086 + 0.355888493228951 NA Intergenic Intergenic -82232 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak1_62_47_0.108407797525678_5.639166399484_0.355888493228951-3 chr7 143014100 143014872 + 0.355888493228951 NA intron (NM_001128082, intron 3 of 5) intron (NM_001128082, intron 3 of 5) 8827 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak2_62_47_0.108407797525678_5.639166399484_0.355888493228951 chr11 75531055 75531975 + 0.355888493228951 NA promoter-TSS (NM_173388) promoter-TSS (NM_173388) -179 NM_001199284 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak1_56_52_-0.177921397790597_5.6389597556679_0.355888493228951-3 chr3 32510710 32511097 + 0.355888493228951 NA intron (NM_001356625, intron 1 of 6) CpG 311 NM_144519 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding common_peak1_191_165_-0.0853287236214069_7.33237506953622_0.355831340428516 chr15 62328705 62330141 + 0.355831340428516 NA Intergenic Intergenic -109972 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_191_165_-0.0853287236214069_7.33237506953622_0.355831340428516-2 chr6 55037172 55039248 + 0.355831340428516 NA exon (NM_180678, exon 1 of 17) exon (NM_180678, exon 1 of 17) 209 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding common_peak2_150_131_-0.0987962151014141_6.99499601180775_0.355753310801944 chr5 64811525 64813352 + 0.355753310801944 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 8915 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_122_94_0.0819395614969451_6.61082538907942_0.355606924867822 chr9 58299618 58300446 + 0.355606924867822 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 13180 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak1_123_94_0.0935389516485898_6.61662508415524_0.355606924867822 chr17 33909536 33910630 + 0.355606924867822 NA promoter-TSS (NR_045146) promoter-TSS (NR_045146) 482 NM_001199733 13163 Mm.271809 NM_007829 ENSMUSG00000002307 Daxx - Fas death domain-associated protein protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-10 chr5 33819531 33820139 + 0.35535220421655 NA Intergenic Intergenic -23277 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-8 chr6 5140043 5140475 + 0.35535220421655 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 53687 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-7 chr2 13456157 13456897 + 0.35535220421655 NA intron (NM_001081084, intron 16 of 66) intron (NM_001081084, intron 16 of 66) 35349 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-3 chr15 79325575 79326019 + 0.35535220421655 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 2574 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655 chr1 54925897 54926324 + 0.35535220421655 NA intron (NM_001081433, intron 1 of 27) CpG 277 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-9 chr4 150059354 150059948 + 0.35535220421655 NA Intergenic Intergenic -8803 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-5 chr18 38993266 38993845 + 0.35535220421655 NA exon (NM_175164, exon 1 of 23) exon (NM_175164, exon 1 of 23) 410 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-8 chr5 100820600 100820826 + 0.35535220421655 NA intron (NM_172405, intron 1 of 8) CpG 222 NM_172405 70681 Mm.486560 NM_172405 ENSMUSG00000035234 Abraxas1 3830405G04Rik|5630400M01Rik|AI506069|AL024423|AV118690|Ccdc98|Fam175a BRCA1 A complex subunit protein-coding unique_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655 chr16 92234824 92235272 + 0.35535220421655 NA Intergenic Intergenic -57341 NM_134110 246133 Mm.156736 NM_134110 ENSMUSG00000039672 Kcne2 2200002I16Rik|AW048273|MiRP1 potassium voltage-gated channel, Isk-related subfamily, gene 2 protein-coding common_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-5 chr4 84114194 84114796 + 0.35535220421655 NA Intergenic Intergenic -69616 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-8 chr2 15055429 15055781 + 0.35535220421655 NA promoter-TSS (NM_001165943) promoter-TSS (NM_001165943) 243 NM_029466 75869 Mm.174068 NM_029466 ENSMUSG00000017418 Arl5b 4930587A11Rik|AW146430|Arl8 ADP-ribosylation factor-like 5B protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-11 chr9 106822031 106822428 + 0.35535220421655 NA intron (NM_001015507, intron 1 of 22) CpG 253 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Dcaf1 AI447437|B930007L02Rik|Vprbp|mKIAA0800 DDB1 and CUL4 associated factor 1 protein-coding common_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-2 chr13 41706099 41706419 + 0.35535220421655 NA Intergenic Intergenic 100043 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-2 chr13 98680823 98681347 + 0.35535220421655 NA Intergenic Intergenic 13746 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-5 chr2 60711457 60712001 + 0.35535220421655 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 10874 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-9 chr8 47533153 47533375 + 0.35535220421655 NA promoter-TSS (NM_203507) promoter-TSS (NM_203507) 206 NM_177240 320714 Mm.39461 NM_177240 ENSMUSG00000038102 Trappc11 AW558465|D030016E14Rik|R75422 trafficking protein particle complex 11 protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-4 chr17 78445286 78445737 + 0.35535220421655 NA Intergenic Intergenic -27359 NM_001285940 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-11 chr8 120217639 120218169 + 0.35535220421655 NA intron (NR_110496, intron 2 of 2) intron (NR_110496, intron 2 of 2) 10326 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-6 chr19 46521237 46521701 + 0.35535220421655 NA Intergenic Intergenic 19821 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-6 chr3 89772833 89773354 + 0.35535220421655 NA promoter-TSS (NM_027315) promoter-TSS (NM_027315) 307 NR_130957 74034 Mm.386816 NR_130957 ENSMUSG00000042579 4632404H12Rik - RIKEN cDNA 4632404H12 gene ncRNA common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655 chr10 93271844 93272390 + 0.35535220421655 NA intron (NM_001322265, intron 2 of 4) intron (NM_001322265, intron 2 of 4) 39042 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-10 chr7 66478966 66479482 + 0.35535220421655 NA Intergenic Intergenic -51747 NM_053080 56847 Mm.140988 NM_053080 ENSMUSG00000015134 Aldh1a3 ALDH6|RALDH3|V1 aldehyde dehydrogenase family 1, subfamily A3 protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-3 chr13 24638712 24639346 + 0.35535220421655 NA intron (NM_001080381, intron 1 of 14) intron (NM_001080381, intron 1 of 14) 381 NM_029679 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-7 chr3 122921472 122921759 + 0.35535220421655 NA intron (NR_046036, intron 1 of 5) intron (NR_046036, intron 1 of 5) 2501 NR_046036 74057 Mm.159123 NR_046036 ENSMUSG00000097852 4933405D12Rik - RIKEN cDNA 4933405D12 gene ncRNA common_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-4 chr18 68058755 68059102 + 0.35535220421655 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 125755 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-6 chr9 106822009 106822379 + 0.35535220421655 NA intron (NM_001015507, intron 1 of 22) CpG 218 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Dcaf1 AI447437|B930007L02Rik|Vprbp|mKIAA0800 DDB1 and CUL4 associated factor 1 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-4 chr2 30124583 30124927 + 0.35535220421655 NA promoter-TSS (NM_001290503) promoter-TSS (NM_001290503) -144 NM_001290503 227693 Mm.44526 NM_178694 ENSMUSG00000039686 Zer1 C230075L19Rik|Zyg11bl zyg-11 related, cell cycle regulator protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-7 chr5 5342669 5343111 + 0.35535220421655 NA intron (NM_011074, intron 2 of 14) intron (NM_011074, intron 2 of 14) 37361 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-6 chr3 132867434 132867946 + 0.35535220421655 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 10906 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655 chr10 81606361 81606755 + 0.35535220421655 NA intron (NR_030677, intron 1 of 2) intron (NR_030677, intron 1 of 2) 250 NR_030677 268319 Mm.131825 NM_001033363 ENSMUSG00000074862 BC025920 - zinc finger protein pseudogene pseudo common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-5 chr2 164440383 164440916 + 0.35535220421655 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 2539 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-4 chr17 34592361 34593060 + 0.35535220421655 NA TTS (NM_134116) TTS (NM_134116) 239 NM_017463 18515 Mm.390957 NM_017463 ENSMUSG00000034673 Pbx2 AU043397|G17 pre B cell leukemia homeobox 2 protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655 chr11 83299073 83299507 + 0.35535220421655 NA promoter-TSS (NM_134025) promoter-TSS (NM_134025) -313 NM_134025 103737 Mm.102205 NM_134025 ENSMUSG00000018733 Pex12 AI451906 peroxisomal biogenesis factor 12 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-2 chr14 29079871 29080587 + 0.35535220421655 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 62021 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding unique_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-2 chr8 57589449 57589846 + 0.35535220421655 NA intron (NM_001167981, intron 1 of 11) intron (NM_001167981, intron 1 of 11) -62106 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA common_peak2_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-9 chr6 114642877 114643390 + 0.35535220421655 NA promoter-TSS (NM_028835) promoter-TSS (NM_028835) 36 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655-2 chr13 24104488 24105077 + 0.35535220421655 NA intron (NM_026825, intron 17 of 37) intron (NM_026825, intron 17 of 37) -113568 NM_145399 214189 Mm.255667 NM_145399 ENSMUSG00000021337 Scgn - secretagogin, EF-hand calcium binding protein protein-coding unique_peak1_40_30_0.123818236786807_5.01610542878028_0.35535220421655 chr10 80678132 80678824 + 0.35535220421655 NA Intergenic Intergenic -2185 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_40_30_0.123818236786807_5.01610542878028_0.35535220421655-3 chr17 35868785 35869289 + 0.35535220421655 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 2422 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak1_35_34_-0.237571768272262_5.01049713280884_0.35535220421655-3 chr13 55593145 55593584 + 0.35535220421655 NA intron (NM_026211, intron 1 of 4) CpG 229 NM_026211 67511 Mm.45233 NM_026211 ENSMUSG00000058569 Tmed9 2400003B06Rik transmembrane p24 trafficking protein 9 protein-coding common_peak1_90_69_0.0908592275110323_6.17471263070048_0.355332524809432-2 chr18 61055559 61056191 + 0.355332524809432 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 10725 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak1_91_69_0.106515305278045_6.18254066958399_0.355332524809432 chr17 25542884 25544175 + 0.355332524809432 NA Intergenic Intergenic 24940 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA common_peak2_83_75_-0.142447796997449_6.17670361494486_0.355332524809432 chr15 62119388 62120060 + 0.355332524809432 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 80467 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_90_69_0.0908592275110323_6.17471263070048_0.355332524809432 chr12 73286154 73287498 + 0.355332524809432 NA promoter-TSS (NM_029580) promoter-TSS (NM_029580) -22 NM_001037717 625098 Mm.32075 NM_001037717 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 protein-coding common_peak2_83_75_-0.142447796997449_6.17670361494486_0.355332524809432-2 chr4 133613360 133614387 + 0.355332524809432 NA exon (NM_001017968, exon 4 of 8) exon (NM_001017968, exon 4 of 8) -11705 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak2_239_205_-0.0771329207038223_7.64793406683131_0.355322462192324 chr5 105791667 105793963 + 0.355322462192324 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -83753 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_115_102_-0.118642485379197_6.62717928449362_0.355052609790503 chr7 45016591 45017259 + 0.355052609790503 NA promoter-TSS (NM_001008422) promoter-TSS (NM_001008422) -676 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak1_152_133_-0.101642108239655_7.01526813633794_0.354904613087279 chr3 108145104 108146737 + 0.354904613087279 NA exon (NM_010306, exon 1 of 9) exon (NM_010306, exon 1 of 9) 232 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak1_205_159_0.0686042905976203_7.35623024018617_0.354825554769007 chr19 34254471 34255840 + 0.354825554769007 NA intron (NM_007392, intron 1 of 8) intron (NM_007392, intron 1 of 8) 218 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding common_peak1_63_48_0.101220240956099_5.66531996459326_0.354801288549198-2 chr7 130865965 130866714 + 0.354801288549198 NA intron (NM_133942, intron 1 of 9) CpG 615 NM_001346515 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-6 chr6 146887538 146888322 + 0.354801288549198 NA promoter-TSS (NM_001170433) promoter-TSS (NM_001170433) -564 NM_001355728 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_64_48_0.123430249520539_5.67642496887548_0.354801288549198 chr10 34206784 34207557 + 0.354801288549198 NA 5' UTR (NM_172508, exon 1 of 6) 5' UTR (NM_172508, exon 1 of 6) 381 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak2_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-5 chr6 116628394 116629332 + 0.354801288549198 NA promoter-TSS (NM_001302439) promoter-TSS (NM_001302439) 65 NM_001302439 67255 Mm.18810 NM_026057 ENSMUSG00000059878 Zfp422 2900028O21Rik|AU041373|KOX15|Krox-25-2|Krox-26|Krox25|Krox26|Znf22 zinc finger protein 422 protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-3 chr17 29007266 29007885 + 0.354801288549198 NA intron (NM_001357173, intron 1 of 13) intron (NM_001357173, intron 1 of 13) 420 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-7 chr7 84362998 84363773 + 0.354801288549198 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 46653 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_57_53_-0.179974480786202_5.66490026177037_0.354801288549198 chr16 4913396 4913829 + 0.354801288549198 NA intron (NM_001357062, intron 4 of 17) intron (NM_001357062, intron 4 of 17) -25499 NM_001316715 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding common_peak1_64_48_0.123430249520539_5.67642496887548_0.354801288549198-4 chr3 9608578 9609298 + 0.354801288549198 NA intron (NM_133218, intron 1 of 8) intron (NM_133218, intron 1 of 8) 1147 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak2_63_48_0.101220240956099_5.66531996459326_0.354801288549198 chr1 58742771 58743416 + 0.354801288549198 NA intron (NM_001355056, intron 7 of 8) intron (NM_001355056, intron 7 of 8) 12541 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_64_48_0.123430249520539_5.67642496887548_0.354801288549198-6 chr5 143313901 143315340 + 0.354801288549198 NA intron (NM_172726, intron 1 of 5) intron (NM_172726, intron 1 of 5) 740 NM_172726 231868 Mm.440105 NM_172726 ENSMUSG00000039244 E130309D02Rik A630028N22 RIKEN cDNA E130309D02 gene protein-coding common_peak1_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-2 chr13 74316730 74317224 + 0.354801288549198 NA intron (NM_001359996, intron 1 of 5) G-rich|Low_complexity|Low_complexity 349 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding common_peak2_63_48_0.101220240956099_5.66531996459326_0.354801288549198-4 chr5 5684179 5685047 + 0.354801288549198 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 9476 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_64_48_0.123430249520539_5.67642496887548_0.354801288549198-3 chr17 29007397 29007956 + 0.354801288549198 NA intron (NM_001357173, intron 1 of 13) CpG 319 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak1_57_53_-0.179974480786202_5.66490026177037_0.354801288549198 chr12 54795097 54795716 + 0.354801288549198 NA intron (NM_026998, intron 2 of 13) CpG 256 NM_026998 72183 Mm.28240 NM_026998 ENSMUSG00000005656 Snx6 2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963 sorting nexin 6 protein-coding common_peak1_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-4 chr5 52834144 52834668 + 0.354801288549198 NA intron (NM_024213, intron 1 of 27) intron (NM_024213, intron 1 of 27) 271 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak2_63_48_0.101220240956099_5.66531996459326_0.354801288549198-3 chr2 173664070 173664671 + 0.354801288549198 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 4525 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak2_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-2 chr17 88597380 88598185 + 0.354801288549198 NA Intergenic Intergenic -28773 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198 chr13 37993540 37994187 + 0.354801288549198 NA intron (NM_001360842, intron 1 of 8) CpG 345 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak1_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-5 chr5 96803154 96803912 + 0.354801288549198 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 10148 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak1_63_48_0.101220240956099_5.66531996459326_0.354801288549198 chr13 5891971 5892708 + 0.354801288549198 NA Intergenic Intergenic 30850 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-6 chr8 46209932 46210706 + 0.354801288549198 NA intron (NM_007450, intron 1 of 3) MIRb|SINE|MIR 743 NM_007450 11739 Mm.16228 NM_007450 ENSMUSG00000031633 Slc25a4 AU019225|Ant1|mANC1 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 protein-coding common_peak2_64_48_0.123430249520539_5.67642496887548_0.354801288549198-2 chr3 116807572 116808189 + 0.354801288549198 NA intron (NM_001362367, intron 1 of 27) intron (NM_001362367, intron 1 of 27) 286 NM_001362367 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding common_peak2_63_48_0.101220240956099_5.66531996459326_0.354801288549198-2 chr13 5892125 5892720 + 0.354801288549198 NA Intergenic Intergenic 30933 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-3 chr2 137412691 137413577 + 0.354801288549198 NA Intergenic Intergenic -296614 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_58_53_-0.155486416840788_5.67714429374307_0.354801288549198 chr15 58257324 58257954 + 0.354801288549198 NA Intergenic Intergenic -42747 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak1_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-3 chr19 5814036 5814643 + 0.354801288549198 NA Intergenic Intergenic -11667 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_64_48_0.123430249520539_5.67642496887548_0.354801288549198-3 chr9 50885572 50886350 + 0.354801288549198 NA intron (NM_001286553, intron 15 of 16) intron (NM_001286553, intron 15 of 16) 29037 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-2 chr15 78833458 78834278 + 0.354801288549198 NA Intergenic Intergenic -8779 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-4 chr4 5793958 5795031 + 0.354801288549198 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 70182 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding common_peak1_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-4 chr5 24384770 24385272 + 0.354801288549198 NA TTS (NM_008713) TTS (NM_008713) 7122 NM_001002897 213948 Mm.332252 NM_001002897 ENSMUSG00000038295 Atg9b Apg912|Apg9l2|Apgdc2|Gm574|Nos3as|eONE|sONE autophagy related 9B protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-4 chr5 111204290 111204835 + 0.354801288549198 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -126135 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_63_48_0.101220240956099_5.66531996459326_0.354801288549198-5 chr8 69935802 69936473 + 0.354801288549198 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) -33579 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_64_48_0.123430249520539_5.67642496887548_0.354801288549198-5 chr3 101712645 101713273 + 0.354801288549198 NA Intergenic Intergenic -108252 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_64_48_0.123430249520539_5.67642496887548_0.354801288549198-2 chr11 116533911 116534359 + 0.354801288549198 NA promoter-TSS (NM_011451) promoter-TSS (NM_011451) -605 NM_011451 20698 Mm.20944 NM_011451 ENSMUSG00000061878 Sphk1 1110006G24Rik|Sk1|Spk1 sphingosine kinase 1 protein-coding common_peak2_57_53_-0.179974480786202_5.66490026177037_0.354801288549198-3 chr2 4541871 4542526 + 0.354801288549198 NA intron (NM_001177843, intron 11 of 23) intron (NM_001177843, intron 11 of 23) -17556 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-2 chr17 28257309 28258199 + 0.354801288549198 NA intron (NM_011145, intron 2 of 7) B1_Mur4|SINE|Alu -13954 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak2_64_48_0.123430249520539_5.67642496887548_0.354801288549198 chr2 32587136 32588120 + 0.354801288549198 NA 5' UTR (NM_001276425, exon 2 of 6) 5' UTR (NM_001276425, exon 2 of 6) 550 NM_011373 20448 Mm.27446 NM_011373 ENSMUSG00000079442 St6galnac4 SIAT7-D|ST6GalNAcIV|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding common_peak2_58_53_-0.155486416840788_5.67714429374307_0.354801288549198-5 chr6 119387892 119388690 + 0.354801288549198 NA intron (NM_197985, intron 1 of 7) CpG 443 NM_001355692 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak2_92_70_0.101538022275554_6.20051613064246_0.354588232415544 chr4 155563863 155564739 + 0.354588232415544 NA intron (NM_001355599, intron 1 of 10) intron (NM_001355599, intron 1 of 10) 486 NM_001355599 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak2_85_76_-0.127598990058712_6.20298704566554_0.354588232415544-2 chr10 86300503 86301544 + 0.354588232415544 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 611 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_84_76_-0.144353764177815_6.19460965860599_0.354588232415544 chr11 3373458 3374306 + 0.354588232415544 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) -2478 NM_173053 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_85_76_-0.127598990058712_6.20298704566554_0.354588232415544-4 chr19 55256918 55258043 + 0.354588232415544 NA intron (NM_027976, intron 1 of 21) B4A|SINE|B4 4111 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak1_85_76_-0.127598990058712_6.20298704566554_0.354588232415544 chr1 36555959 36556689 + 0.354588232415544 NA intron (NM_001304329, intron 1 of 14) intron (NM_001304329, intron 1 of 14) 1233 NM_001304330 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak2_85_76_-0.127598990058712_6.20298704566554_0.354588232415544-3 chr18 75696060 75697361 + 0.354588232415544 NA intron (NM_201354, intron 1 of 11) CpG 986 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak1_85_76_-0.127598990058712_6.20298704566554_0.354588232415544-2 chr5 31180045 31181111 + 0.354588232415544 NA promoter-TSS (NM_027901) promoter-TSS (NM_027901) -434 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000106864 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding common_peak2_92_70_0.101538022275554_6.20051613064246_0.354588232415544-2 chr8 119777702 119778358 + 0.354588232415544 NA intron (NM_028883, intron 1 of 7) intron (NM_028883, intron 1 of 7) 386 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak2_84_76_-0.144353764177815_6.19460965860599_0.354588232415544-2 chr19 4333026 4333765 + 0.354588232415544 NA intron (NM_001001984, intron 12 of 20) intron (NM_001001984, intron 12 of 20) -27173 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_84_76_-0.144353764177815_6.19460965860599_0.354588232415544 chr15 58822642 58823372 + 0.354588232415544 NA exon (NM_175212, exon 1 of 7) exon (NM_175212, exon 1 of 7) 420 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak1_92_70_0.101538022275554_6.20051613064246_0.354588232415544 chr1 134361147 134361933 + 0.354588232415544 NA exon (NM_020588, exon 2 of 8) exon (NM_020588, exon 2 of 8) 459 NM_020588 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding common_peak1_92_70_0.101538022275554_6.20051613064246_0.354588232415544-2 chr15 91702863 91703980 + 0.354588232415544 NA intron (NM_025730, intron 11 of 50) intron (NM_025730, intron 11 of 50) 30197 NM_025730 66725 Mm.37558 NM_025730 ENSMUSG00000036273 Lrrk2 4921513O20Rik|9330188B09Rik|AW561911|D630001M17Rik|Gm927|cI-46 leucine-rich repeat kinase 2 protein-coding common_peak2_85_76_-0.127598990058712_6.20298704566554_0.354588232415544 chr1 66816380 66816893 + 0.354588232415544 NA intron (NM_001357156, intron 1 of 14) CpG 959 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak2_125_96_0.0864024764864633_6.64311408043036_0.354509443695952 chr4 129671726 129672824 + 0.354509443695952 NA intron (NM_008468, intron 1 of 13) intron (NM_008468, intron 1 of 13) 492 NM_008468 16650 Mm.202358 NM_008468 ENSMUSG00000003731 Kpna6 IPOA7|Kpna5|NPI-2 karyopherin (importin) alpha 6 protein-coding common_peak2_153_134_-0.103036124452886_7.02529753482439_0.354490061583565 chr2 117668013 117669636 + 0.354490061583565 NA Intergenic Intergenic 143978 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_353_299_-0.0626919620922362_8.19747270944976_0.354394139816279 chr2 118761146 118763606 + 0.354394139816279 NA intron (NM_001001982, intron 1 of 10) intron (NM_001001982, intron 1 of 10) 285 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding common_peak1_243_209_-0.0811994075097342_7.67364581391126_0.354257688639275 chr11 59345343 59347129 + 0.354257688639275 NA Intergenic Intergenic 29417 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_197_170_-0.0840608874071727_7.37582207118231_0.354175296113394 chr8 70630752 70632598 + 0.354175296113394 NA 5' UTR (NM_011819, exon 1 of 2) 5' UTR (NM_011819, exon 1 of 2) 420 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_154_135_-0.104411382516923_7.03525714999188_0.354081842086077 chr12 4917379 4918506 + 0.354081842086077 NA intron (NM_001362349, intron 1 of 27) CpG 589 NM_001362349 320817 Mm.210966 NM_001099628 ENSMUSG00000052812 Atad2b 1110014E10Rik|BC032887|C79189|D530031C13Rik ATPase family, AAA domain containing 2B protein-coding common_peak1_155_135_-0.095199023714259_7.03986332939321_0.354081842086077 chr16 25059500 25060823 + 0.354081842086077 NA intron (NR_040374, intron 1 of 2) intron (NR_040374, intron 1 of 2) 522 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_165_127_0.0812686413176742_7.04063432065884_0.354081842086077 chr7 127478643 127479851 + 0.354081842086077 NA Intergenic CpG -5974 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding common_peak2_126_97_0.0829297774587072_6.65617473284456_0.353977093504907-4 chr7 28929468 28930785 + 0.353977093504907 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 32206 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_126_97_0.0829297774587072_6.65617473284456_0.353977093504907 chr11 117265793 117267449 + 0.353977093504907 NA intron (NM_001113487, intron 1 of 10) CpG 375 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_126_97_0.0829297774587072_6.65617473284456_0.353977093504907-2 chr14 76775951 76777181 + 0.353977093504907 NA Intergenic Intergenic 16435 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_126_97_0.0829297774587072_6.65617473284456_0.353977093504907-3 chr2 152226550 152227745 + 0.353977093504907 NA intron (NM_007788, intron 1 of 12) CpG 307 NM_007788 12995 Mm.23692 NM_007788 ENSMUSG00000074698 Csnk2a1 CK2|Csnk2a1-rs4 casein kinase 2, alpha 1 polypeptide protein-coding common_peak2_118_104_-0.109810590328784_6.65934022250173_0.353977093504883-2 chr6 49262936 49263990 + 0.353977093504883 NA intron (NM_001362188, intron 1 of 8) CpG 589 NM_001347209 101214 Mm.196598 NM_198102 ENSMUSG00000029817 Tra2a 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1 transformer 2 alpha protein-coding common_peak2_118_104_-0.109810590328784_6.65934022250173_0.353977093504883 chr5 65390792 65391396 + 0.353977093504883 NA promoter-TSS (NM_001310612) promoter-TSS (NM_001310612) 337 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-17 chr19 17873269 17873599 + 0.353907621462756 NA Intergenic Intergenic -35802 NM_001190483 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-6 chr9 23030040 23030596 + 0.353907621462756 NA Intergenic Intergenic -192758 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-3 chr15 36174152 36174479 + 0.353907621462756 NA intron (NM_001039368, intron 1 of 3) intron (NM_001039368, intron 1 of 3) 305 NM_001039368 17749 Mm.27375 NM_023127 ENSMUSG00000045996 Polr2k ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0 polymerase (RNA) II (DNA directed) polypeptide K protein-coding unique_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-3 chr5 91990892 91991417 + 0.353907621462756 NA intron (NM_001177577, intron 1 of 1) intron (NM_001177577, intron 1 of 1) 3681 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Odaph Gm1045|Gm1045-a|Gm1045-b odontogenesis associated phosphoprotein protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-21 chr9 43777781 43778147 + 0.353907621462756 NA intron (NM_021424, intron 1 of 5) intron (NM_021424, intron 1 of 5) 33388 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-5 chr11 99082252 99082718 + 0.353907621462756 NA intron (NM_172564, intron 2 of 12) intron (NM_172564, intron 2 of 12) 6821 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-11 chr12 82171335 82171763 + 0.353907621462756 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 1533 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-6 chr5 24451983 24452475 + 0.353907621462756 NA promoter-TSS (NM_139153) promoter-TSS (NM_139153) 52 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-18 chr6 42359790 42360296 + 0.353907621462756 NA 3' UTR (NM_001289617, exon 11 of 11) 3' UTR (NM_001289617, exon 11 of 11) 10215 NM_001289618 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak1_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-5 chr6 87225935 87226206 + 0.353907621462756 NA intron (NM_054041, intron 12 of 17) intron (NM_054041, intron 12 of 17) 109705 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-7 chr11 119677455 119677840 + 0.353907621462756 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 74742 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-12 chr15 38924509 38924955 + 0.353907621462756 NA Intergenic Intergenic -9177 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-3 chr12 13575530 13575823 + 0.353907621462756 NA intron (NM_027706, intron 51 of 51) intron (NM_027706, intron 51 of 51) 51970 NR_136761 102639399 Mm.122052 NR_136761 ENSMUSG00000113666 Gm35725 - predicted gene, 35725 ncRNA common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-17 chr5 96210179 96210641 + 0.353907621462756 NA intron (NM_001039084, intron 1 of 6) intron (NM_001039084, intron 1 of 6) 295 NM_053158 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-8 chr13 102674427 102674677 + 0.353907621462756 NA Intergenic Intergenic -18995 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding common_peak1_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-2 chr11 102888364 102888777 + 0.353907621462756 NA 3' UTR (NM_010277, exon 9 of 9) 3' UTR (NM_010277, exon 9 of 9) 3401 NM_025766 66784 Mm.483216 NM_025766 ENSMUSG00000075510 Fam187a 4933439F11Rik family with sequence similarity 187, member A protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-7 chr13 51888452 51888798 + 0.353907621462756 NA Intergenic Intergenic 41950 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-20 chr8 22688031 22688353 + 0.353907621462756 NA intron (NM_001159774, intron 5 of 21) intron (NM_001159774, intron 5 of 21) 18391 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-14 chr16 4598620 4598971 + 0.353907621462756 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 4082 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-14 chr3 52101795 52102076 + 0.353907621462756 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 3071 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-4 chr12 81532453 81532699 + 0.353907621462756 NA intron (NM_001309814, intron 1 of 2) CpG 335 NM_001309847 105940408 NM_001309847 ENSMUSG00000021139 Gm20498 ARIP2a|Synj2bp-cox16 predicted gene 20498 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-20 chr3 102507458 102507720 + 0.353907621462756 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 37670 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-9 chr14 54224768 54225000 + 0.353907621462756 NA Intergenic Intergenic 29045 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756 chr16 17110865 17111289 + 0.353907621462756 NA intron (NM_001252445, intron 1 of 19) CpG 175 NM_001252445 66053 Mm.253614 NM_144954 ENSMUSG00000022771 Ppil2 0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik|CYC4 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding common_peak1_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-3 chr15 98934176 98934367 + 0.353907621462756 NA intron (NM_011654, intron 1 of 3) CpG 119 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-19 chr3 58418924 58419320 + 0.353907621462756 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 4402 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-7 chr9 67082056 67082324 + 0.353907621462756 NA Intergenic Intergenic -20110 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-4 chr11 79962080 79962385 + 0.353907621462756 NA exon (NM_144826, exon 1 of 19) exon (NM_144826, exon 1 of 19) 155 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-11 chr2 32882938 32883284 + 0.353907621462756 NA intron (NM_146119, intron 1 of 13) MIRc|SINE|MIR 6977 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-7 chr9 108977295 108977623 + 0.353907621462756 NA exon (NM_007738, exon 94 of 118) exon (NM_007738, exon 94 of 118) 7537 NR_030492 751536 NR_030492 ENSMUSG00000076142 Mir711 Mirn711|mir-711|mmu-mir-711 microRNA 711 ncRNA common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-3 chr11 70239411 70239672 + 0.353907621462756 NA intron (NM_173742, intron 1 of 2) intron (NM_173742, intron 1 of 2) 311 NM_173742 52898 Mm.29852 NM_173742 ENSMUSG00000093989 Rnasek 2310033H11Rik|AA571397|D11Bwg0434e ribonuclease, RNase K protein-coding common_peak1_19_20_-0.342620479807087_4.22100718287522_0.353907621462756 chr1 136127985 136128440 + 0.353907621462756 NA intron (NR_046169, intron 2 of 2) intron (NR_046169, intron 2 of 2) 2971 NR_046170 329253 Mm.487858 NR_046167 ENSMUSG00000086264 Gm15850 6530439I21 predicted gene 15850 ncRNA common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-10 chr16 91405876 91406097 + 0.353907621462756 NA promoter-TSS (NM_008349) promoter-TSS (NM_008349) -249 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-6 chr13 15897788 15898236 + 0.353907621462756 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 90769 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-3 chr6 115994317 115994752 + 0.353907621462756 NA exon (NM_026376, exon 1 of 36) exon (NM_026376, exon 1 of 36) 471 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-19 chr6 52213630 52214011 + 0.353907621462756 NA promoter-TSS (NM_010452) promoter-TSS (NM_010452) -753 NM_010452 15400 Mm.71533 NM_010452 ENSMUSG00000079560 Hoxa3 Hox-1.5|Mo-10 homeobox A3 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-23 chr7 116444968 116445271 + 0.353907621462756 NA Intergenic Intergenic -1661 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-6 chr11 109650151 109650511 + 0.353907621462756 NA promoter-TSS (NM_021880) promoter-TSS (NM_021880) -590 NM_021880 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756 chr1 71881316 71881682 + 0.353907621462756 NA Intergenic Intergenic -6613 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-2 chr1 180363839 180364082 + 0.353907621462756 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -33411 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-2 chr14 21501008 21501208 + 0.353907621462756 NA intron (NM_017479, intron 1 of 16) CpG 1323 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756 chr1 138506843 138507138 + 0.353907621462756 NA intron (NM_021605, intron 7 of 9) intron (NM_021605, intron 7 of 9) 112767 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding unique_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-4 chr7 47051952 47052441 + 0.353907621462756 NA intron (NM_026436, intron 1 of 2) intron (NM_026436, intron 1 of 2) 1556 NM_026436 67893 Mm.27338 NM_026436 ENSMUSG00000010307 Tmem86a 1810054O13Rik|AI414959|AW742698 transmembrane protein 86A protein-coding common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756 chr11 94653825 94654030 + 0.353907621462756 NA promoter-TSS (NM_177752) promoter-TSS (NM_177752) 136 NM_053161 94064 Mm.34951 NM_053161 ENSMUSG00000024414 Mrpl27 A630055F16Rik|D11Moh47|D18Ertd643e mitochondrial ribosomal protein L27 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-22 chr5 105876064 105876372 + 0.353907621462756 NA promoter-TSS (NM_018759) promoter-TSS (NM_018759) -350 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-18 chr3 9001058 9001337 + 0.353907621462756 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 3007 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-5 chr8 35605412 35605780 + 0.353907621462756 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -16576 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-21 chr4 19569527 19569979 + 0.353907621462756 NA intron (NM_027769, intron 1 of 15) CpG 355 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756 chr1 134803373 134803758 + 0.353907621462756 NA non-coding (NR_015606, exon 1 of 2) non-coding (NR_015606, exon 1 of 2) 156 NR_015606 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-2 chr17 87025725 87025988 + 0.353907621462756 NA promoter-TSS (NM_008838) promoter-TSS (NM_008838) 295 NM_019936 56724 Mm.109329 NM_019936 ENSMUSG00000024146 Cript 1200020A08Rik|AA589469 cysteine-rich PDZ-binding protein protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-2 chr11 70191313 70191530 + 0.353907621462756 NA Intergenic Intergenic -22489 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-12 chr2 145842289 145842775 + 0.353907621462756 NA intron (NM_028724, intron 4 of 12) intron (NM_028724, intron 4 of 12) 56416 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-16 chr5 66590595 66590911 + 0.353907621462756 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 28064 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding unique_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756 chr11 51688351 51688539 + 0.353907621462756 NA intron (NM_025319, intron 1 of 1) intron (NM_025319, intron 1 of 1) 189 NM_025319 66050 Mm.35693 NM_025319 ENSMUSG00000007777 0610009B22Rik - RIKEN cDNA 0610009B22 gene protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-13 chr15 67177146 67177383 + 0.353907621462756 NA promoter-TSS (NM_009177) promoter-TSS (NM_009177) -382 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-13 chr2 153346959 153347173 + 0.353907621462756 NA intron (NM_001039939, intron 1 of 11) intron (NM_001039939, intron 1 of 11) 927 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-24 chr8 126684425 126684844 + 0.353907621462756 NA Intergenic Intergenic -91198 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-4 chr15 79455273 79455487 + 0.353907621462756 NA Intergenic Intergenic -13237 NM_001359863 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-8 chr11 120345617 120345871 + 0.353907621462756 NA TTS (NM_001313923) TTS (NM_001313923) 1669 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-5 chr12 119238986 119239434 + 0.353907621462756 NA promoter-TSS (NM_177290) promoter-TSS (NM_177290) -934 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-15 chr18 10466721 10467359 + 0.353907621462756 NA intron (NM_001083628, intron 4 of 32) intron (NM_001083628, intron 4 of 32) 141861 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding unique_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-4 chr8 10131272 10131655 + 0.353907621462756 NA Intergenic MLT1A1|LTR|ERVL-MaLR -22448 NM_001319151 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding unique_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-2 chrX 136741576 136742061 + 0.353907621462756 NA promoter-TSS (NM_019768) promoter-TSS (NM_019768) -209 NM_019768 56397 Mm.27218 NM_019768 ENSMUSG00000031422 Morf4l2 2410017O14Rik|Mrgx|Sid393p|mKIAA0026 mortality factor 4 like 2 protein-coding common_peak1_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-6 chr9 98033264 98033547 + 0.353907621462756 NA promoter-TSS (NM_022319) promoter-TSS (NM_022319) -238 NM_022319 64085 Mm.440903 NM_022319 ENSMUSG00000032452 Clstn2 2900042C18Rik|AI448973|CSTN2|Cs2|Cst-2|mKIAA4134 calsyntenin 2 protein-coding common_peak1_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-4 chr2 117597364 117597586 + 0.353907621462756 NA Intergenic Intergenic 215327 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-16 chr18 36744213 36744434 + 0.353907621462756 NA promoter-TSS (NM_011879) promoter-TSS (NM_011879) 264 NM_010885 17991 Mm.29867 NM_010885 ENSMUSG00000014294 Ndufa2 AV000592|B8|C1-B8|CI-B8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 protein-coding unique_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-2 chr19 28284547 28284806 + 0.353907621462756 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -273510 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_19_20_-0.342620479807087_4.22100718287522_0.353907621462756-15 chr4 152086952 152087280 + 0.353907621462756 NA intron (NR_104381, intron 1 of 21) CpG 253 NR_104381 269608 Mm.332102 NM_001004156 ENSMUSG00000039713 Plekhg5 BC023181|Syx pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-9 chr12 35734748 35735083 + 0.353907621462756 NA Intergenic Intergenic -39797 NR_045050 71581 Mm.100110 NR_045050 ENSMUSG00000113985 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA common_peak2_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-10 chr12 53253032 53253342 + 0.353907621462756 NA intron (NM_013780, intron 1 of 11) CpG 4510 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak1_20_20_-0.272727747186137_4.25595354918569_0.353907621462756-5 chr2 164437882 164438108 + 0.353907621462756 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 5193 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-9 chr2 148274663 148275140 + 0.353907621462753 NA Intergenic Intergenic -120476 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-5 chr13 107700028 107700536 + 0.353907621462753 NA Intergenic Intergenic 12885 NR_045900 72257 Mm.234155 NR_045900 ENSMUSG00000102000 1700006H21Rik - RIKEN cDNA 1700006H21 gene ncRNA common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-2 chr1 58359291 58359605 + 0.353907621462753 NA intron (NM_001008419, intron 34 of 35) intron (NM_001008419, intron 34 of 35) -33688 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753 chr1 20414314 20414546 + 0.353907621462753 NA exon (NM_153179, exon 37 of 67) exon (NM_153179, exon 37 of 67) 57976 NR_045734 75028 Mm.417820 NR_045734 ENSMUSG00000089914 4930486I03Rik - RIKEN cDNA 4930486I03 gene ncRNA common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-11 chr6 34716858 34717073 + 0.353907621462753 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 7521 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-11 chr15 58823819 58824006 + 0.353907621462753 NA promoter-TSS (NM_175212) promoter-TSS (NM_175212) -485 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-2 chr11 86595915 86596489 + 0.353907621462753 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -12044 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-13 chr8 109155225 109155479 + 0.353907621462753 NA intron (NR_151498, intron 1 of 4) intron (NR_151498, intron 1 of 4) 80130 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-9 chr5 115348683 115348928 + 0.353907621462753 NA intron (NM_007748, intron 1 of 2) CpG-11401 150 NM_007748 12861 Mm.43415 NM_007748 ENSMUSG00000041697 Cox6a1 VIaL cytochrome c oxidase subunit VIa polypeptide 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-14 chr2 21239447 21239748 + 0.353907621462753 NA Intergenic Intergenic 33873 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-10 chr15 42369275 42369604 + 0.353907621462753 NA Intergenic Intergenic 307538 NM_001286062 11600 Mm.309336 NM_009640 ENSMUSG00000022309 Angpt1 1110046O21Rik|Ang-1|Ang1 angiopoietin 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-24 chr9 101035051 101035340 + 0.353907621462753 NA promoter-TSS (NM_025835) promoter-TSS (NM_025835) -311 NM_025835 66904 Mm.335385 NM_025835 ENSMUSG00000032527 Pccb 1300012P06Rik|AI314687|R74805 propionyl Coenzyme A carboxylase, beta polypeptide protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-3 chr12 99377592 99378022 + 0.353907621462753 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 72267 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-20 chr5 142910008 142910272 + 0.353907621462753 NA Intergenic Intergenic -3386 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-13 chr19 46572760 46573014 + 0.353907621462753 NA promoter-TSS (NM_053196) promoter-TSS (NM_053196) 295 NM_001355233 56350 Mm.22085 NM_019718 ENSMUSG00000025035 Arl3 - ADP-ribosylation factor-like 3 protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-10 chr6 29526736 29527017 + 0.353907621462753 NA intron (NM_001311083, intron 1 of 9) CpG 251 NM_012057 27056 Mm.6479 NM_012057 ENSMUSG00000029771 Irf5 AW491843|mirf5 interferon regulatory factor 5 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-7 chr17 83861632 83861950 + 0.353907621462753 NA Intergenic CpG -7373 NR_155491 320021 Mm.379475 NR_155490 C430042M11Rik - RIKEN cDNA C430042M11 gene ncRNA common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-6 chr4 122836298 122836545 + 0.353907621462753 NA intron (NM_008917, intron 1 of 8) intron (NM_008917, intron 1 of 8) 194 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-16 chr3 97298315 97298630 + 0.353907621462753 NA Intergenic Intergenic -71108 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-6 chr17 36042949 36043212 + 0.353907621462753 NA promoter-TSS (NM_001347382) promoter-TSS (NM_001347382) 119 NM_001034909 547347 Mm.484641 NM_001034909 ENSMUSG00000073407 Gm6034 EG547347|H2-gs14-2 predicted gene 6034 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-3 chr1 86487818 86488155 + 0.353907621462753 NA Intergenic CpG -38571 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-7 chr4 154236633 154237016 + 0.353907621462753 NA intron (NM_001162977, intron 4 of 36) intron (NM_001162977, intron 4 of 36) 63071 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-10 chr3 143596158 143596640 + 0.353907621462753 NA Intergenic Intergenic 115744 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-25 chrX 152016526 152016785 + 0.353907621462753 NA promoter-TSS (NM_025660) promoter-TSS (NM_025660) 227 NM_019710 24061 Mm.482095 NM_019710 ENSMUSG00000041133 Smc1a 5830426I24Rik|SMC-1A|Sb1.8|Smc1|Smc1alpha|Smc1l1|Smcb|mKIAA0178 structural maintenance of chromosomes 1A protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-3 chr15 102997824 102998238 + 0.353907621462753 NA Intergenic Intergenic 7492 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-8 chr5 36460818 36461130 + 0.353907621462753 NA intron (NR_126490, intron 1 of 1) intron (NR_126490, intron 1 of 1) 3880 NR_126490 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-22 chr7 127009309 127009594 + 0.353907621462753 NA intron (NM_080638, intron 1 of 14) intron (NM_080638, intron 1 of 14) 5143 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-15 chr2 104096112 104096399 + 0.353907621462753 NA intron (NM_007652, intron 1 of 3) intron (NM_007652, intron 1 of 3) 454 NM_001111060 12509 Mm.247265 NM_007652 ENSMUSG00000032679 Cd59a AA987121|Cd59|protectin CD59a antigen protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753 chr14 47516409 47516821 + 0.353907621462753 NA intron (NR_027414, intron 4 of 5) PB1D7|SINE|Alu 44054 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-9 chr13 70796108 70796500 + 0.353907621462753 NA intron (NM_172053, intron 5 of 22) intron (NM_172053, intron 5 of 22) 45507 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-5 chr10 80399870 80400212 + 0.353907621462753 NA promoter-TSS (NM_001306143) promoter-TSS (NM_001306143) -510 NM_001306143 17192 Mm.7142 NM_013595 ENSMUSG00000035478 Mbd3 AI181826|AU019209 methyl-CpG binding domain protein 3 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-18 chr4 57798057 57798364 + 0.353907621462753 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -47038 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-11 chr4 137447996 137448287 + 0.353907621462753 NA Intergenic Intergenic -5155 NM_027063 69380 Mm.272519 NM_027063 ENSMUSG00000041399 1700013G24Rik AI507018 RIKEN cDNA 1700013G24 gene protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-8 chr11 113071633 113072225 + 0.353907621462753 NA intron (NR_015556, intron 1 of 2) intron (NR_015556, intron 1 of 2) 129909 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-4 chr13 42576756 42577259 + 0.353907621462753 NA Intergenic Intergenic -103792 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-23 chr8 70698171 70698420 + 0.353907621462753 NA 5' UTR (NM_010592, exon 1 of 1) 5' UTR (NM_010592, exon 1 of 1) 556 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding unique_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753 chr3 90598507 90598918 + 0.353907621462753 NA intron (NM_001355602, intron 1 of 2) intron (NM_001355602, intron 1 of 2) -1502 NM_011310 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-8 chr18 76242399 76242760 + 0.353907621462753 NA intron (NM_010754, intron 1 of 10) intron (NM_010754, intron 1 of 10) 878 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-12 chr8 13670037 13670397 + 0.353907621462753 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 7370 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-2 chr14 76789619 76789939 + 0.353907621462753 NA Intergenic Intergenic 29648 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753 chr10 24393824 24394292 + 0.353907621462753 NA Intergenic Intergenic 170541 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-17 chr4 15265866 15266195 + 0.353907621462753 NA exon (NM_181401, exon 1 of 3) exon (NM_181401, exon 1 of 3) 210 NM_181401 100201 Mm.394111 NM_181401 ENSMUSG00000043252 Tmem64 9630015D15Rik|AI790744|AV300874 transmembrane protein 64 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-7 chr11 82015947 82016223 + 0.353907621462753 NA Intergenic Intergenic -19492 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-4 chr1 90676547 90676873 + 0.353907621462753 NA Intergenic Intergenic 73285 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-5 chr3 89436763 89437030 + 0.353907621462753 NA intron (NM_146131, intron 1 of 10) intron (NM_146131, intron 1 of 10) 192 NM_146131 229534 Mm.65906 NM_146131 ENSMUSG00000042613 Pbxip1 4732463H20Rik pre B cell leukemia transcription factor interacting protein 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-21 chr6 135252530 135252800 + 0.353907621462753 NA intron (NM_001080553, intron 1 of 5) intron (NM_001080553, intron 1 of 5) 1671 NM_010352 14840 Mm.272306 NM_010352 ENSMUSG00000030206 Gsg1 - germ cell associated 1 protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-12 chr15 98049004 98049331 + 0.353907621462753 NA intron (NM_144851, intron 13 of 17) intron (NM_144851, intron 13 of 17) -43422 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-19 chr4 126129180 126129594 + 0.353907621462753 NA intron (NM_028800, intron 5 of 10) intron (NM_028800, intron 5 of 10) -18616 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_23_17_0.140950645002937_4.24040032394378_0.353907621462753-4 chr2 143916738 143917241 + 0.353907621462753 NA intron (NM_019771, intron 1 of 3) intron (NM_019771, intron 1 of 3) 1658 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak1_23_17_0.140950645002937_4.24040032394378_0.353907621462753-6 chr10 112929176 112929496 + 0.353907621462753 NA promoter-TSS (NM_001033474) promoter-TSS (NM_001033474) -310 NM_001033474 382423 Mm.431239 NM_001033474 ENSMUSG00000074748 Atxn7l3b 4921506J03Rik|6230409E21Rik|AI315132 ataxin 7-like 3B protein-coding common_peak1_93_71_0.0966813222864982_6.21826566258556_0.353864072814984 chr10 59221028 59221699 + 0.353864072814984 NA promoter-TSS (NM_172939) promoter-TSS (NM_172939) 484 NM_001024911 103080 Mm.346842 NM_001024910 ENSMUSG00000019917 Sept10 4921515A04Rik|9430099J10Rik|AA408298|AI874685 septin 10 protein-coding common_peak1_93_71_0.0966813222864982_6.21826566258556_0.353864072814984-2 chr6 112245009 112245716 + 0.353864072814984 NA Intergenic MIRb|SINE|MIR -28396 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding common_peak2_86_77_-0.129653595257528_6.22057542123348_0.353864072814984 chr19 21882157 21883484 + 0.353864072814984 NA Intergenic Intergenic 104480 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_59_54_-0.157882147898775_5.70241863957527_0.353756356258781 chr1 16665051 16665928 + 0.353756356258781 NA exon (NM_026392, exon 1 of 3) exon (NM_026392, exon 1 of 3) 298 NM_026392 70397 Mm.194225 NM_026392 ENSMUSG00000025940 Tmem70 1110020A09Rik|2210416J16Rik transmembrane protein 70 protein-coding unique_peak1_59_54_-0.157882147898775_5.70241863957527_0.353756356258781 chr18 67448499 67449178 + 0.353756356258781 NA intron (NM_027130, intron 1 of 16) CpG 298 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak1_59_54_-0.157882147898775_5.70241863957527_0.353756356258781-2 chr19 10895999 10896502 + 0.353756356258781 NA intron (NM_134129, intron 1 of 15) intron (NM_134129, intron 1 of 15) 1019 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak2_59_54_-0.157882147898775_5.70241863957527_0.353756356258781 chr1 171503583 171504213 + 0.353756356258781 NA exon (NM_019484, exon 1 of 1) exon (NM_019484, exon 1 of 1) 420 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding common_peak2_59_54_-0.157882147898775_5.70241863957527_0.353756356258781-2 chr11 121702481 121703250 + 0.353756356258781 NA intron (NM_144797, intron 1 of 3) CpG 438 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_65_49_0.11615481504979_5.70193359729962_0.353756356258769-2 chr5 122422268 122422986 + 0.353756356258769 NA exon (NM_019805, exon 1 of 11) exon (NM_019805, exon 1 of 11) 183 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding common_peak2_65_49_0.11615481504979_5.70193359729962_0.353756356258769-4 chr4 12140300 12141009 + 0.353756356258769 NA intron (NM_028226, intron 1 of 2) CpG 537 NM_028226 72397 Mm.430709 NM_028226 ENSMUSG00000046667 Rbm12b1 3000004N20Rik|Rbm12b|Rbm12ba RNA binding motif protein 12 B1 protein-coding common_peak2_65_49_0.11615481504979_5.70193359729962_0.353756356258769 chr14 76521514 76522094 + 0.353756356258769 NA promoter-TSS (NR_045660) promoter-TSS (NR_045660) -949 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak2_65_49_0.11615481504979_5.70193359729962_0.353756356258769-2 chr16 85150796 85151783 + 0.353756356258769 NA intron (NM_001198825, intron 1 of 15) (GAAAA)n|Simple_repeat|Simple_repeat 22418 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak2_65_49_0.11615481504979_5.70193359729962_0.353756356258769-3 chr18 75362265 75363157 + 0.353756356258769 NA intron (NR_155535, intron 6 of 6) intron (NR_155535, intron 6 of 6) 4377 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_65_49_0.11615481504979_5.70193359729962_0.353756356258769-3 chr6 52177689 52178365 + 0.353756356258769 NA intron (NM_010452, intron 3 of 4) intron (NM_010452, intron 3 of 4) 5146 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA common_peak1_65_49_0.11615481504979_5.70193359729962_0.353756356258769 chr3 104781193 104782118 + 0.353756356258769 NA intron (NM_027982, intron 1 of 9) CpG 599 NM_027982 71887 Mm.379204 NM_027982 ENSMUSG00000002228 Ppm1j 2310008J22Rik|PP2Czeta|Ppp2cz protein phosphatase 1J protein-coding common_peak1_65_49_0.11615481504979_5.70193359729962_0.353756356258769-4 chrX 163958275 163958749 + 0.353756356258769 NA 5' UTR (NM_009453, exon 1 of 11) 5' UTR (NM_009453, exon 1 of 11) 154 NM_009453 22184 Mm.426178 NM_009453 ENSMUSG00000031370 Zrsr2 35kDa|5031411E02Rik|A230052C13Rik|C77286|U2af1-rs2|URP zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 protein-coding common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522 chr1 130733137 130733646 + 0.353704024845522 NA intron (NM_177604, intron 1 of 3) intron (NM_177604, intron 1 of 3) 1415 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-6 chr18 82489664 82490452 + 0.353704024845522 NA intron (NM_001025245, intron 1 of 3) B4|SINE|B4 14935 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-10 chr6 71933663 71934191 + 0.353704024845522 NA intron (NM_009088, intron 12 of 33) intron (NM_009088, intron 12 of 33) 24874 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak1_37_35_-0.200761546897165_5.06954422799373_0.353704024845522 chr10 116268594 116269164 + 0.353704024845522 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -32495 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-4 chr16 55541052 55541449 + 0.353704024845522 NA Intergenic Intergenic 46519 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_42_31_0.146242530209432_5.07312126510472_0.353704024845522 chr16 62854264 62854650 + 0.353704024845522 NA exon (NM_011173, exon 1 of 15) exon (NM_011173, exon 1 of 15) 150 NM_011173 19128 Mm.127156 NM_011173 ENSMUSG00000022912 Pros1 AW214361 protein S (alpha) protein-coding common_peak1_42_31_0.146242530209432_5.07312126510472_0.353704024845522-2 chr16 64873534 64874229 + 0.353704024845522 NA Intergenic Intergenic 21880 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-6 chr5 113901876 113902519 + 0.353704024845522 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 6509 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-7 chr19 12010520 12011051 + 0.353704024845522 NA Intergenic Intergenic 25955 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-3 chr14 120375110 120376009 + 0.353704024845522 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 69107 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-7 chr2 27009950 27010529 + 0.353704024845522 NA TTS (NM_001290463) TTS (NM_001290463) 313 NM_001243239 381356 Mm.150270 NM_029862 ENSMUSG00000015488 Cacfd1 5930434B04Rik|mFwe calcium channel flower domain containing 1 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522 chr10 80142477 80143056 + 0.353704024845522 NA intron (NM_001347092, intron 1 of 2) intron (NM_001347092, intron 1 of 2) 451 NM_025313 66043 Mm.278560 NM_025313 ENSMUSG00000003072 Atp5d 0610008F14Rik|1500000I11Rik|AA960090|AI876556|AU020773|Atp5f1d|C85518 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-4 chr14 56810916 56811452 + 0.353704024845522 NA promoter-TSS (NR_152252) promoter-TSS (NR_152252) 280 NM_001253753 219105 Mm.473172 NM_144842 ENSMUSG00000040123 Zmym5 9830124H08Rik zinc finger, MYM-type 5 protein-coding common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-3 chr11 74838647 74839120 + 0.353704024845522 NA intron (NM_010813, intron 4 of 5) intron (NM_010813, intron 4 of 5) 7959 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_41_31_0.11253469601938_5.05626734800969_0.353704024845522 chr12 86085616 86085952 + 0.353704024845522 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 3223 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-5 chr16 77643825 77644348 + 0.353704024845522 NA Intergenic Intergenic -2187 NR_029540 723952 NR_029540 ENSMUSG00000065472 Mir125b-2 Mirn125b-2|mir-125b-2 microRNA 125b-2 ncRNA common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-9 chr3 137293454 137294146 + 0.353704024845522 NA Intergenic Intergenic -47278 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522 chr10 108377497 108377827 + 0.353704024845522 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 45473 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak1_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-2 chr14 31206391 31206702 + 0.353704024845522 NA intron (NM_001347583, intron 1 of 13) CpG 280 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-7 chr6 120836280 120836575 + 0.353704024845522 NA intron (NM_153516, intron 1 of 6) CpG 197 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522 chr12 64965935 64966507 + 0.353704024845522 NA promoter-TSS (NM_025707) promoter-TSS (NM_025707) 479 NM_177805 328108 Mm.138465 NM_177805 ENSMUSG00000035614 Togaram1 A430041B07Rik|BC062107|C130034K06|Fam179b|mKIAA0423 TOG array regulator of axonemal microtubules 1 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-9 chr3 88592518 88593019 + 0.353704024845522 NA Intergenic Intergenic 13160 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding unique_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522 chr11 5707242 5707624 + 0.353704024845522 NA intron (NM_026080, intron 2 of 3) CpG 266 NM_026080 64660 Mm.7328 NM_026080 ENSMUSG00000020477 Mrps24 3110030K20Rik|AI414579|Rpms24 mitochondrial ribosomal protein S24 protein-coding common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-3 chr15 97840467 97840935 + 0.353704024845522 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 3801 NM_001204279 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-11 chr9 13442654 13443286 + 0.353704024845522 NA Intergenic Intergenic 11609 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_41_31_0.11253469601938_5.05626734800969_0.353704024845522-2 chr15 53223733 53224025 + 0.353704024845522 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 122304 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-5 chr16 18066021 18066632 + 0.353704024845522 NA promoter-TSS (NM_001289813) promoter-TSS (NM_001289813) -77 NR_110380 13353 Mm.27155 NM_010047 ENSMUSG00000003531 Dgcr6 - DiGeorge syndrome critical region gene 6 protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-8 chr8 36163619 36164069 + 0.353704024845522 NA Intergenic Intergenic 7834 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522 chr1 74661852 74662283 + 0.353704024845522 NA intron (NM_001014974, intron 1 of 19) CpG 313 NM_001014974 67534 Mm.260714 NM_001014974 ENSMUSG00000033257 Ttll4 4632407P03Rik|AI451681|mKIAA0173 tubulin tyrosine ligase-like family, member 4 protein-coding common_peak1_42_31_0.146242530209432_5.07312126510472_0.353704024845522-3 chr6 108659675 108660314 + 0.353704024845522 NA promoter-TSS (NM_011498) promoter-TSS (NM_011498) -635 NM_011498 20893 Mm.2436 NM_011498 ENSMUSG00000030103 Bhlhe40 Bhlhb2|C130042M06Rik|CR8|Clast5|Dec1|Sharp2|Stra13|Stra14 basic helix-loop-helix family, member e40 protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-2 chr11 58333661 58334419 + 0.353704024845522 NA intron (NM_001308167, intron 2 of 6) intron (NM_001308167, intron 2 of 6) 3250 NM_001308168 79566 Mm.290534 NM_024480 ENSMUSG00000013646 Sh3bp5l 2310074E09Rik|BC003251|mKIAA1720 SH3 binding domain protein 5 like protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-2 chr15 103272972 103273314 + 0.353704024845522 NA intron (NM_019817, intron 1 of 8) intron (NM_019817, intron 1 of 8) 255 NM_001357748 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding common_peak1_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-4 chr16 45379520 45380098 + 0.353704024845522 NA Intergenic Intergenic 29244 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-7 chr19 4838753 4839330 + 0.353704024845522 NA promoter-TSS (NM_207268) promoter-TSS (NM_207268) 281 NM_016892 12460 Mm.434411 NM_016892 ENSMUSG00000034108 Ccs Ccsd copper chaperone for superoxide dismutase protein-coding common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-4 chr18 35834130 35834689 + 0.353704024845522 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 4095 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-6 chr19 7417077 7417571 + 0.353704024845522 NA promoter-TSS (NM_175381) promoter-TSS (NM_175381) -301 NM_175381 108899 Mm.386838 NM_175381 ENSMUSG00000053080 2700081O15Rik AI255177|AI848741|AW742297 RIKEN cDNA 2700081O15 gene protein-coding common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-6 chr18 35834123 35834716 + 0.353704024845522 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 4105 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_41_31_0.11253469601938_5.05626734800969_0.353704024845522-3 chr19 4439589 4440031 + 0.353704024845522 NA promoter-TSS (NM_007485) promoter-TSS (NM_007485) 251 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-2 chr15 25368871 25369302 + 0.353704024845522 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 44678 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-5 chr3 95668374 95668946 + 0.353704024845522 NA Intergenic B1F|SINE|Alu 9939 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-6 chr7 67222751 67223152 + 0.353704024845522 NA promoter-TSS (NR_131044) promoter-TSS (NR_131044) 335 NM_001191051 75099 Mm.121691 NM_175215 ENSMUSG00000043831 Lysmd4 4930506D23Rik LysM, putative peptidoglycan-binding, domain containing 4 protein-coding common_peak1_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-3 chr15 61608194 61608528 + 0.353704024845522 NA Intergenic Intergenic 166090 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-5 chr17 87024517 87025272 + 0.353704024845522 NA promoter-TSS (NM_019936) promoter-TSS (NM_019936) 507 NM_008838 18701 Mm.219685 NM_008838 ENSMUSG00000024145 Pigf - phosphatidylinositol glycan anchor biosynthesis, class F protein-coding common_peak2_41_31_0.11253469601938_5.05626734800969_0.353704024845522-4 chr3 121468861 121469530 + 0.353704024845522 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 42654 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-5 chr19 44900660 44900979 + 0.353704024845522 NA Intergenic Intergenic -30300 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-5 chr19 16015598 16016008 + 0.353704024845522 NA Intergenic Intergenic 30728 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-10 chr7 102210605 102211136 + 0.353704024845522 NA promoter-TSS (NM_022979) promoter-TSS (NM_022979) 535 NM_001291358 233575 Mm.302013 NM_145583 ENSMUSG00000030990 Pgap2 1810006G21Rik|C76649|Frag1 post-GPI attachment to proteins 2 protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-4 chr2 30416181 30416518 + 0.353704024845522 NA promoter-TSS (NM_007760) promoter-TSS (NM_007760) 299 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak2_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-7 chr9 88482872 88483185 + 0.353704024845522 NA promoter-TSS (NM_019796) promoter-TSS (NM_019796) -631 NM_001284328 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-8 chr2 90544993 90545863 + 0.353704024845522 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 35219 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-9 chr8 125734260 125734693 + 0.353704024845522 NA intron (NM_025636, intron 1 of 4) CpG 273 NM_001310688 66566 Mm.25296 NM_025636 ENSMUSG00000031851 Ntpcr 2310079N02Rik|AI449709 nucleoside-triphosphatase, cancer-related protein-coding common_peak2_41_31_0.11253469601938_5.05626734800969_0.353704024845522-5 chr8 61624364 61624753 + 0.353704024845522 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -33389 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-8 chr19 5433385 5433951 + 0.353704024845522 NA Intergenic Intergenic 8524 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_41_31_0.11253469601938_5.05626734800969_0.353704024845522-3 chr11 115535964 115536265 + 0.353704024845522 NA exon (NM_133354, exon 1 of 4) exon (NM_133354, exon 1 of 4) 116 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-4 chr11 94958444 94958987 + 0.353704024845522 NA Intergenic Intergenic -8878 NM_018792 54388 Mm.30482 NM_018792 ENSMUSG00000038994 Hils1 H1.9|TISP64 histone H1-like protein in spermatids 1 protein-coding common_peak2_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-2 chr13 45882664 45883282 + 0.353704024845522 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 82018 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522 chr9 72702409 72703445 + 0.353704024845522 NA intron (NM_001357998, intron 1 of 23) intron (NM_001357998, intron 1 of 23) 9629 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_37_35_-0.200761546897165_5.06954422799373_0.353704024845522-6 chr3 123267529 123267876 + 0.353704024845522 NA intron (NM_027135, intron 1 of 22) CpG 206 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding common_peak1_36_35_-0.23896426038487_5.05044287124988_0.353704024845522-2 chr10 88501003 88501486 + 0.353704024845522 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 2726 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak1_42_31_0.146242530209432_5.07312126510472_0.353704024845522-4 chr7 112378789 112379232 + 0.353704024845522 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 10702 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_42_31_0.146242530209432_5.07312126510472_0.353704024845522-3 chr17 35120723 35121102 + 0.353704024845522 NA promoter-TSS (NM_001128597) promoter-TSS (NM_001128597) 380 NM_001303476 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_166_128_0.0786451166032904_7.0505498137249_0.353679810596352 chr11 51999508 52000760 + 0.353679810596352 NA intron (NM_009458, intron 1 of 5) intron (NM_009458, intron 1 of 5) 332 NM_009458 22210 Mm.384918 NM_009458 ENSMUSG00000020390 Ube2b E2-14k|HR6B|Rad6b|mHR6B ubiquitin-conjugating enzyme E2B protein-coding common_peak1_156_136_-0.0966147719361201_7.04972469699247_0.353679810596352 chr2 180171594 180172544 + 0.353679810596352 NA exon (NM_019822, exon 2 of 10) exon (NM_019822, exon 2 of 10) 481 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding common_peak1_127_98_0.0795184854184541_6.66911586278884_0.353455239277955 chr12 54984909 54986781 + 0.353455239277955 NA intron (NM_013815, intron 1 of 26) CpG-3178 491 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak1_127_98_0.0795184854184541_6.66911586278884_0.353455239277955-2 chr17 26595193 26597252 + 0.353455239277955 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 34710 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_128_98_0.0906665327840335_6.67468988647163_0.353455239277955 chr1 153126100 153128074 + 0.353455239277955 NA exon (NM_008485, exon 22 of 24) exon (NM_008485, exon 22 of 24) 59360 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_128_98_0.0906665327840335_6.67468988647163_0.353455239277955 chr4 139130146 139130959 + 0.353455239277955 NA intron (NM_001163006, intron 1 of 3) CpG 485 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak1_127_98_0.0795184854184541_6.66911586278884_0.353455239277955-3 chr4 129032624 129034200 + 0.353455239277955 NA Intergenic Intergenic -24859 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_119_105_-0.111497868510558_6.67217152030792_0.35345523927793 chr13 97248409 97249711 + 0.35345523927793 NA intron (NM_007930, intron 2 of 2) intron (NM_007930, intron 2 of 2) 7955 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak2_119_105_-0.111497868510558_6.67217152030792_0.35345523927793-2 chr18 36411736 36413078 + 0.35345523927793 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 42088 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_167_129_0.0760569238444377_7.06039627495067_0.353283827450026 chr17 75110776 75111986 + 0.353283827450026 NA intron (NM_019919, intron 3 of 33) intron (NM_019919, intron 3 of 33) -67400 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_302_257_-0.0679487335116296_7.97725288866744_0.353270375088829 chr15 99368464 99370413 + 0.353270375088829 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 1044 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_302_257_-0.0679487335116296_7.97725288866744_0.353270375088829 chr10 99260146 99262951 + 0.353270375088829 NA Intergenic CpG -1683 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_87_78_-0.131660325153288_6.23795058560046_0.353159239817814 chr15 89314395 89315285 + 0.353159239817814 NA intron (NM_001081030, intron 1 of 39) CpG 471 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_87_78_-0.131660325153288_6.23795058560046_0.353159239817814-2 chr5 146845304 146846638 + 0.353159239817814 NA intron (NM_026864, intron 3 of 3) intron (NM_026864, intron 3 of 3) 900 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding common_peak1_94_72_0.0919408148457634_6.2357949663029_0.353159239817814 chr15 35155201 35155704 + 0.353159239817814 NA intron (NM_001357821, intron 1 of 11) CpG 354 NM_001357821 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding common_peak2_87_78_-0.131660325153288_6.23795058560046_0.353159239817814-3 chr8 107424365 107425096 + 0.353159239817814 NA intron (NM_026277, intron 2 of 8) CpG 308 NM_026277 67619 Mm.36817 NM_026277 ENSMUSG00000003848 Nob1 1700021I09Rik|ART-4|Nob1p|Psmd8bp1 NIN1/RPN12 binding protein 1 homolog protein-coding common_peak1_94_72_0.0919408148457634_6.2357949663029_0.353159239817814-2 chr8 70766190 70766706 + 0.353159239817814 NA intron (NM_023065, intron 1 of 7) intron (NM_023065, intron 1 of 7) 215 NM_023065 65972 Mm.30241 NM_023065 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak2_94_72_0.0919408148457634_6.2357949663029_0.353159239817814 chr14 75844226 75844920 + 0.353159239817814 NA promoter-TSS (NM_009429) promoter-TSS (NM_009429) 391 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak2_94_72_0.0919408148457634_6.2357949663029_0.353159239817814-2 chr15 35155207 35155701 + 0.353159239817814 NA intron (NM_001357821, intron 1 of 11) CpG 352 NM_001357821 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding common_peak2_129_99_0.0872289242877793_6.68747065191861_0.352943573573549 chr6 17478872 17480310 + 0.352943573573549 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 15634 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_120_106_-0.113156225424822_6.68488887368874_0.352943573573549 chr8 31149946 31151047 + 0.352943573573549 NA non-coding (NR_103719, exon 1 of 8) non-coding (NR_103719, exon 1 of 8) 180 NR_103719 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding common_peak1_129_99_0.0872289242877793_6.68747065191861_0.352943573573549 chr2 154657131 154658087 + 0.352943573573549 NA intron (NM_029362, intron 1 of 4) intron (NM_029362, intron 1 of 4) 583 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding common_peak2_120_106_-0.113156225424822_6.68488887368874_0.352943573573549 chr15 5143916 5144848 + 0.352943573573549 NA intron (NM_001013367, intron 1 of 8) intron (NM_001013367, intron 1 of 8) 521 NM_001355640 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak2_158_138_-0.0993903947994363_7.06924587532379_0.35289375715496 chr6 87849755 87851004 + 0.35289375715496 NA intron (NM_001355195, intron 1 of 4) intron (NM_001355195, intron 1 of 4) 727 NM_001109745 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak1_318_248_0.0569914681152062_7.98849766612568_0.35285815724692 chr3 121426559 121428966 + 0.35285815724692 NA intron (NM_028044, intron 1 of 6) intron (NM_028044, intron 1 of 6) 1221 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_60_55_-0.160198852754728_5.72725549568024_0.35275127702289-3 chr7 44496230 44496880 + 0.35275127702289 NA promoter-TSS (NM_028169) promoter-TSS (NM_028169) -33 NM_001357650 75538 Mm.258841 NM_028169 ENSMUSG00000051113 Fam71e1 0610007G24Rik|1700021N13Rik|1700021P22Rik|GARI-L5 family with sequence similarity 71, member E1 protein-coding common_peak2_60_55_-0.160198852754728_5.72725549568024_0.35275127702289-2 chr3 121592453 121593630 + 0.35275127702289 NA Intergenic MTEa|LTR|ERVL-MaLR 50444 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_60_55_-0.160198852754728_5.72725549568024_0.35275127702289 chr19 8977117 8978202 + 0.35275127702289 NA exon (NM_026007, exon 9 of 10) exon (NM_026007, exon 9 of 10) 10618 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878 chr11 5862067 5862759 + 0.352751277022878 NA intron (NM_009636, intron 1 of 20) intron (NM_009636, intron 1 of 20) 547 NM_001291857 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878-2 chr11 84879483 84880206 + 0.352751277022878 NA promoter-TSS (NM_025414) promoter-TSS (NM_025414) 351 NM_027388 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878-4 chr15 37406426 37407135 + 0.352751277022878 NA intron (NM_001359845, intron 4 of 6) intron (NM_001359845, intron 4 of 6) -18774 NM_029113 74892 Mm.107630 NM_029113 ENSMUSG00000022288 4930447A16Rik - RIKEN cDNA 4930447A16 gene protein-coding common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878-3 chr12 31634112 31635078 + 0.352751277022878 NA promoter-TSS (NM_001164090) promoter-TSS (NM_001164090) 2 NM_007530 12033 Mm.242379 NM_007530 ENSMUSG00000020650 Bcap29 AW208404|Bap29 B cell receptor associated protein 29 protein-coding common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878-7 chr5 33378620 33379146 + 0.352751277022878 NA non-coding (NR_153107, exon 1 of 14) non-coding (NR_153107, exon 1 of 14) 187 NM_001081101 71101 Mm.132178 NM_027674 ENSMUSG00000037355 Uvssa 4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530 UV stimulated scaffold protein A protein-coding common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878-6 chr17 24720165 24720834 + 0.352751277022878 NA promoter-TSS (NR_027900) promoter-TSS (NR_027900) -290 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA common_peak2_66_50_0.109127675668892_5.72698917980594_0.352751277022878-5 chr15 56720545 56721269 + 0.352751277022878 NA Intergenic Intergenic -26361 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_319_249_0.0556927400166103_7.99363065467039_0.352654478471321 chr15 36281723 36283119 + 0.352654478471321 NA intron (NM_001357631, intron 1 of 7) intron (NM_001357631, intron 1 of 7) 726 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_380_297_0.0522517237659628_8.24529438234514_0.352632712753324 chr2 165856245 165859358 + 0.352632712753324 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 372 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_214_166_0.0680851773427706_7.41774688114544_0.352616415390527 chr6 86524210 86525955 + 0.352616415390527 NA exon (NM_011865, exon 1 of 1) exon (NM_011865, exon 1 of 1) 1107 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1|hnRNP-E1 poly(rC) binding protein 1 protein-coding common_peak2_169_131_0.0709836775853887_7.07988595815115_0.352509468236555 chr15 27380378 27382167 + 0.352509468236555 NA Intergenic Intergenic -85405 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_160_139_-0.0918256451478268_7.08337019437105_0.352509468236555 chr11 4261520 4262886 + 0.352509468236555 NA intron (NM_008501, intron 1 of 3) intron (NM_008501, intron 1 of 3) -4593 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_96_73_0.102157188782128_6.26053196002001_0.352472969721833 chr17 75005444 75006839 + 0.352472969721833 NA exon (NM_019919, exon 1 of 34) exon (NM_019919, exon 1 of 34) 612 NM_019919 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_96_73_0.102157188782128_6.26053196002001_0.352472969721833 chr11 104442513 104443511 + 0.352472969721833 NA promoter-TSS (NM_001081045) promoter-TSS (NM_001081045) -721 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_88_79_-0.133620868487435_6.25511766064364_0.352472969721833 chr10 94198564 94199530 + 0.352472969721833 NA promoter-TSS (NM_025551) promoter-TSS (NM_025551) 38 NM_025551 66414 Mm.27886 NM_025551 ENSMUSG00000020022 Ndufa12 2410011G03Rik|AW112974 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 protein-coding common_peak2_96_73_0.102157188782128_6.26053196002001_0.352472969721833-2 chr7 140941449 140942584 + 0.352472969721833 NA intron (NR_153832, intron 1 of 11) intron (NR_153832, intron 1 of 11) 625 NM_145387 212974 Mm.260139 NM_145387 ENSMUSG00000062031 Pgghg 5730511L01Rik|Athl1|BC023151 protein glucosylgalactosylhydroxylysine glucosidase protein-coding common_peak2_95_73_0.0873123216698124_6.25310952646386_0.352472969721833 chr7 4500921 4502270 + 0.352472969721833 NA promoter-TSS (NM_029834) promoter-TSS (NM_029834) 85 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding common_peak1_307_261_-0.0666985085127472_8.00007374728108_0.352452394420835 chr16 23986401 23989480 + 0.352452394420835 NA intron (NM_009744, intron 1 of 9) CpG 912 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_130_100_0.0838508256905959_6.70013689559709_0.352441800843561 chr18 5592076 5593363 + 0.352441800843561 NA promoter-TSS (NR_033552) promoter-TSS (NR_033552) 72 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding common_peak1_121_107_-0.114786412433836_6.69749429594655_0.352441800843561 chr8 11361980 11363680 + 0.352441800843561 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -50004 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_121_107_-0.114786412433836_6.69749429594655_0.352441800843561-2 chr8 120563033 120563848 + 0.352441800843561 NA intron (NM_001145896, intron 3 of 15) intron (NM_001145896, intron 3 of 15) 24744 NR_106159 102466849 NR_106159 ENSMUSG00000098280 Mir7687 Gm27573|mmu-mir-7687 microRNA 7687 ncRNA common_peak2_121_107_-0.114786412433836_6.69749429594655_0.352441800843561 chr4 84522349 84523660 + 0.352441800843561 NA intron (NM_172870, intron 2 of 5) intron (NM_172870, intron 2 of 5) 152082 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak1_502_421_-0.0517389480037878_8.69522971470529_0.352434449040518 chr3 145650257 145654237 + 0.352434449040518 NA Intergenic Intergenic -2262 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_253_217_-0.0775996827762535_7.7293844833888_0.352248716586346 chr1 182516196 182517907 + 0.352248716586346 NA intron (NM_009794, intron 1 of 20) CpG 559 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-6 chr4 130000293 130000726 + 0.352152970649951 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 8455 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-7 chr4 137500424 137500795 + 0.352152970649951 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 31806 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-3 chr11 117317020 117317718 + 0.352152970649951 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -14346 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951 chr10 79936503 79936995 + 0.352152970649951 NA intron (NM_001288625, intron 3 of 8) intron (NM_001288625, intron 3 of 8) 9408 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-4 chr15 90430461 90431017 + 0.352152970649951 NA Intergenic Intergenic 77029 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-5 chr17 6001228 6001869 + 0.352152970649951 NA intron (NM_001357667, intron 4 of 24) intron (NM_001357667, intron 4 of 24) -6032 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak2_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-4 chr5 142401580 142402301 + 0.352152970649951 NA exon (NM_199068, exon 1 of 9) exon (NM_199068, exon 1 of 9) 443 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_38_36_-0.203079588946381_5.10791357115576_0.352152970649951 chr11 79214280 79214698 + 0.352152970649951 NA Intergenic Intergenic 28535 NM_001042565 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-2 chr11 6443368 6443872 + 0.352152970649951 NA intron (NM_029938, intron 1 of 4) intron (NM_029938, intron 1 of 4) 823 NM_029938 77605 Mm.27624 NM_029938 ENSMUSG00000041126 H2afv C530002L11Rik|H2a.z-2|H2av|Tg(Wnt1-cre)11Rth|Wnt1-Cre|Wnt1::Cre|Wnt1cre H2A histone family, member V protein-coding common_peak2_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-3 chr4 88793877 88794219 + 0.352152970649951 NA promoter-TSS (NM_001161609).6 promoter-TSS (NM_001161609).6 306 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 - predicted gene 13275 protein-coding common_peak2_38_36_-0.203079588946381_5.10791357115576_0.352152970649951-2 chr19 4045613 4046105 + 0.352152970649951 NA Intergenic Intergenic -3638 NM_181796 14869 Mm.441542 NM_181796 ENSMUSG00000038155 Gstp2 GSTpiA|Gst-3|Gst3 glutathione S-transferase, pi 2 protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-7 chr4 84675386 84675860 + 0.352152970649944 NA promoter-TSS (NM_172870) promoter-TSS (NM_172870) -537 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-3 chr12 105009311 105009994 + 0.352152970649944 NA intron (NM_172500, intron 1 of 16) CpG 157 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-2 chr17 5137821 5138334 + 0.352152970649944 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 143003 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-6 chr17 80786832 80787216 + 0.352152970649944 NA Intergenic Intergenic -58999 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-3 chr19 32905042 32905570 + 0.352152970649944 NA Intergenic Intergenic 147729 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-9 chr5 30814766 30815472 + 0.352152970649944 NA intron (NM_133350, intron 1 of 6) intron (NM_133350, intron 1 of 6) 478 NM_133350 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-6 chr3 121712268 121712796 + 0.352152970649944 NA Intergenic Intergenic -11005 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944 chr12 69754265 69755105 + 0.352152970649944 NA intron (NM_183294, intron 6 of 9) intron (NM_183294, intron 6 of 9) 9259 NR_030450 751538 NR_030450 ENSMUSG00000076065 Mir681 Mirn681|mmu-mir-681 microRNA 681 ncRNA common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-5 chr17 24550625 24551094 + 0.352152970649944 NA intron (NM_013630, intron 1 of 45) CpG 909 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystin 1, transient receptor poteintial channel interacting protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-5 chr3 88593725 88594260 + 0.352152970649944 NA Intergenic Intergenic 14384 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-8 chr5 113874723 113875180 + 0.352152970649944 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 33755 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-10 chr5 148995984 148996584 + 0.352152970649944 NA Intergenic Intergenic -1069 NR_102384 319982 Mm.33303 NR_102383 ENSMUSG00000106951 5930430L01Rik - RIKEN cDNA 5930430L01 gene ncRNA common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-4 chr16 4643371 4643905 + 0.352152970649944 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 3693 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-4 chr19 46521207 46521765 + 0.352152970649944 NA Intergenic Intergenic 19838 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-8 chr19 32210427 32210880 + 0.352152970649944 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 360 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-9 chr6 100707788 100708202 + 0.352152970649944 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 3261 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944 chr12 55836380 55836966 + 0.352152970649944 NA intron (NR_155205, intron 1 of 10) CpG 307 NR_155205 52592 Mm.24761 NM_027867 ENSMUSG00000012076 Brms1l 0710008O11Rik|AI159718|BRMS1|D12Ertd407e breast cancer metastasis-suppressor 1-like protein-coding common_peak2_43_32_0.134781283238607_5.11178476097776_0.352152970649944-10 chr8 22540374 22540722 + 0.352152970649944 NA intron (NM_011394, intron 4 of 10) intron (NM_011394, intron 4 of 10) 53265 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-7 chr19 24173633 24174121 + 0.352152970649944 NA intron (NM_011597, intron 1 of 22) CpG 312 NM_001198985 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak1_43_32_0.134781283238607_5.11178476097776_0.352152970649944-2 chr12 76403608 76404008 + 0.352152970649944 NA promoter-TSS (NM_008301) promoter-TSS (NM_008301) -368 NM_001002012 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding common_peak1_171_132_0.0768501355617541_7.09370750328207_0.352130833090263 chr10 71127710 71129863 + 0.352130833090263 NA intron (NM_031397, intron 1 of 20) B3A|SINE|B2 30904 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_131_101_0.0805306832797745_6.71269068361138_0.351949636863278 chr15 86184839 86186380 + 0.351949636863278 NA promoter-TSS (NR_155352) promoter-TSS (NR_155352) -119 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak2_131_101_0.0805306832797745_6.71269068361138_0.351949636863278 chr8 39005464 39006613 + 0.351949636863278 NA 5' UTR (NM_030254, exon 1 of 10) 5' UTR (NM_030254, exon 1 of 10) 193 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak2_122_108_-0.116389154949033_6.70998974730241_0.351949636863229 chr1 134077811 134078928 + 0.351949636863229 NA intron (NM_007570, intron 1 of 1) intron (NM_007570, intron 1 of 1) 786 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_123_108_-0.104789764797388_6.71578944237823_0.351949636863229 chr18 36411560 36413057 + 0.351949636863229 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 42187 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_123_108_-0.104789764797388_6.71578944237823_0.351949636863229 chr19 44756916 44758577 + 0.351949636863229 NA intron (NM_011037, intron 1 of 9) intron (NM_011037, intron 1 of 9) 352 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_89_80_-0.135536835031285_6.27208158536898_0.35180453854947 chr7 74012612 74013599 + 0.35180453854947 NA intron (NM_009181, intron 1 of 5) CpG 577 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_89_80_-0.135536835031285_6.27208158536898_0.35180453854947 chr2 157279037 157279797 + 0.35180453854947 NA promoter-TSS (NM_001355165) promoter-TSS (NM_001355165) -9 NM_001355165 20014 Mm.22130 NM_019642 ENSMUSG00000027642 Rpn2 1300012C06Rik|AV261018|Rpn-2 ribophorin II protein-coding common_peak2_89_80_-0.135536835031285_6.27208158536898_0.35180453854947-2 chr8 70658842 70659655 + 0.35180453854947 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 490 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_97_74_0.0974844732969302_6.27756092714435_0.35180453854947 chr15 83593748 83594895 + 0.35180453854947 NA intron (NM_183017, intron 1 of 13) intron (NM_183017, intron 1 of 13) 836 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding common_peak1_61_56_-0.16244047461196_5.75166977685876_0.351783812734557 chr11 43747267 43747970 + 0.351783812734557 NA intron (NM_133795, intron 1 of 7) intron (NM_133795, intron 1 of 7) 355 NM_133795 66827 Mm.271974 NM_133795 ENSMUSG00000041278 Ttc1 4833412C19Rik|C79328|TPR1 tetratricopeptide repeat domain 1 protein-coding common_peak2_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-5 chr4 89485104 89485951 + 0.351783812734557 NA intron (NR_132431, intron 7 of 9) MIRb|SINE|MIR -174495 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-3 chr17 24719418 24719873 + 0.351783812734557 NA promoter-TSS (NM_008503) promoter-TSS (NM_008503) 187 NR_028515 100306952 Mm.484806 NR_028515 ENSMUSG00000089255 Snora78 ACA64 small nucleolar RNA, H/ACA box 7 snoRNA common_peak2_61_56_-0.16244047461196_5.75166977685876_0.351783812734557 chr1 5083160 5083851 + 0.351783812734557 NA intron (NM_133826, intron 1 of 13) CpG 419 NM_001310442 108664 Mm.27082 NM_133826 ENSMUSG00000033793 Atp6v1h 0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13 ATPase, H+ transporting, lysosomal V1 subunit H protein-coding common_peak1_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-2 chr12 77971669 77972249 + 0.351783812734557 NA Intergenic Intergenic -254696 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-3 chr11 60931143 60931911 + 0.351783812734557 NA promoter-TSS (NM_008928) promoter-TSS (NM_008928) 340 NR_027800 24082 Mm.46270 NM_025293 ENSMUSG00000042549 Map2k3os F3-1|Gm16516|Gtlf3a mitogen-activated protein kinase kinase 3, opposite strand ncRNA common_peak1_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-4 chr2 163359142 163360351 + 0.351783812734557 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 38227 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-4 chr14 29968422 29968950 + 0.351783812734557 NA intron (NM_019979, intron 1 of 4) CpG 306 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak2_61_56_-0.16244047461196_5.75166977685876_0.351783812734557-2 chr10 34483460 34484311 + 0.351783812734557 NA 5' UTR (NM_010237, exon 2 of 9) 5' UTR (NM_010237, exon 2 of 9) 485 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding common_peak1_67_51_0.102336159622116_5.75160779795215_0.351783812734545-3 chr9 71287789 71288845 + 0.351783812734545 NA intron (NM_009022, intron 12 of 13) intron (NM_009022, intron 12 of 13) 72528 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak2_67_51_0.102336159622116_5.75160779795215_0.351783812734545 chr12 72085865 72086584 + 0.351783812734545 NA promoter-TSS (NM_026038) promoter-TSS (NM_026038) 385 NM_024205 104771 Mm.258935 NM_024205 ENSMUSG00000005078 Jkamp 1200003C05Rik|2310047L11Rik|Jamp JNK1/MAPK8-associated membrane protein protein-coding common_peak1_67_51_0.102336159622116_5.75160779795215_0.351783812734545 chr12 116280234 116281007 + 0.351783812734545 NA promoter-TSS (NM_028731) promoter-TSS (NM_028731) -602 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak1_67_51_0.102336159622116_5.75160779795215_0.351783812734545-2 chr2 158112960 158113833 + 0.351783812734545 NA Intergenic Intergenic -21599 NR_040609 72340 Mm.443395 NR_040609 ENSMUSG00000100860 2010009K17Rik - RIKEN cDNA 2010009K17 gene ncRNA common_peak1_172_133_0.074347849409083_7.10326311516231_0.351757727839532 chr11 62550228 62551594 + 0.351757727839532 NA promoter-TSS (NR_002875) promoter-TSS (NR_002875) -260 NM_011664 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak2_172_133_0.074347849409083_7.10326311516231_0.351757727839532 chr11 49087759 49089089 + 0.351757727839532 NA intron (NM_008330, intron 1 of 1) intron (NM_008330, intron 1 of 1) 1407 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_132_102_0.0772669973628144_6.72513402586463_0.351466808194361 chr17 78416375 78418063 + 0.351466808194361 NA intron (NM_001360407, intron 1 of 9) intron (NM_001360407, intron 1 of 9) 933 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_133_102_0.087997510883925_6.73049928262518_0.351466808194361 chr17 87445780 87447167 + 0.351466808194361 NA intron (NM_007589, intron 1 of 5) CpG 462 NM_001355703 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding common_peak2_133_102_0.087997510883925_6.73049928262518_0.351466808194361 chr6 31100602 31101791 + 0.351466808194361 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -38103 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_173_134_0.0718780469806468_7.11275462054115_0.351390032201024 chr3 132683014 132684642 + 0.351390032201024 NA promoter-TSS (NM_001163455) promoter-TSS (NM_001163455) 51 NM_007926 13722 Mm.235137 NM_007926 ENSMUSG00000028029 Aimp1 9830137A06Rik|AIMP1/p43|EMAPII|Emap2|Scye1|p43 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 protein-coding common_peak2_258_221_-0.0759060348650218_7.75646284891759_0.351300050684402 chr16 10990526 10993019 + 0.351300050684402 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 1349 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-3 chr11 77982014 77982329 + 0.351190433797602 NA promoter-TSS (NM_174852) promoter-TSS (NM_174852) -645 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-4 chr16 31606163 31606646 + 0.351190433797602 NA Intergenic Intergenic -11729 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-7 chr2 180033450 180033792 + 0.351190433797602 NA intron (NM_177727, intron 7 of 8) intron (NM_177727, intron 7 of 8) 8634 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-5 chr13 94155352 94155874 + 0.351190433797602 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 97817 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-10 chr6 20038069 20038548 + 0.351190433797602 NA Intergenic Intergenic 482966 NR_105789 102465192 NR_105789 ENSMUSG00000099149 Mir6370 Gm27480|mmu-mir-6370 microRNA 6370 ncRNA unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-9 chr7 102361127 102361649 + 0.351190433797602 NA intron (NM_009287, intron 2 of 11) intron (NM_009287, intron 2 of 11) -80307 NM_009103 20133 Mm.197486 NM_009103 ENSMUSG00000030978 Rrm1 RnrM1 ribonucleotide reductase M1 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-7 chr2 66256141 66256526 + 0.351190433797602 NA intron (NM_001047604, intron 1 of 28) intron (NM_001047604, intron 1 of 28) 284 NM_001047604 73668 Mm.250868 NM_001047604 ENSMUSG00000034848 Ttc21b 2410066K11Rik|Thm1|aln|mKIAA1992 tetratricopeptide repeat domain 21B protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-5 chr17 27856576 27856847 + 0.351190433797602 NA 5' UTR (NM_001080769, exon 1 of 21) 5' UTR (NM_001080769, exon 1 of 21) 204 NM_001080769 224648 Mm.291291 NM_001080769 ENSMUSG00000039512 Uhrf1bp1 1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127 UHRF1 (ICBP90) binding protein 1 protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-8 chr2 13408808 13409179 + 0.351190433797602 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 82883 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-13 chrX 153723630 153723940 + 0.351190433797602 NA 5' UTR (NM_027327, exon 1 of 4) 5' UTR (NM_027327, exon 1 of 4) 231 NM_027327 70123 Mm.146408 NM_027327 ENSMUSG00000086316 Nbdy 2210013O21Rik|AI181827|Thp5 negative regulator of P-body association protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-4 chr13 31805965 31806332 + 0.351190433797602 NA promoter-TSS (NM_008592) promoter-TSS (NM_008592) -498 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-9 chr5 66604143 66604512 + 0.351190433797602 NA intron (NM_001310626, intron 1 of 15) C-rich|Low_complexity|Low_complexity 14490 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-2 chr13 5347613 5347953 + 0.351190433797602 NA Intergenic Intergenic 510309 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-2 chr10 81345863 81346219 + 0.351190433797602 NA TTS (NM_010440) TTS (NM_010440) -2775 NM_148951 209047 Mm.218755 NM_148951 ENSMUSG00000034872 Gipc3 Ahl5|Rgs19ip3 GIPC PDZ domain containing family, member 3 protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-3 chr11 88864828 88865044 + 0.351190433797602 NA promoter-TSS (NM_001042541) promoter-TSS (NM_001042541) -350 NM_001042541 11640 Mm.2969 NM_009648 ENSMUSG00000018428 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84 A kinase (PRKA) anchor protein 1 protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-10 chr7 127572689 127573085 + 0.351190433797602 NA promoter-TSS (NM_026888) promoter-TSS (NM_026888) -461 NM_001360741 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602 chr10 80387905 80388172 + 0.351190433797602 NA promoter-TSS (NM_198615) promoter-TSS (NM_198615) -387 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602 chr1 43260977 43261513 + 0.351190433797602 NA Intergenic RSINE1|SINE|B4 -64484 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-6 chr2 23067668 23067909 + 0.351190433797602 NA promoter-TSS (NM_028793) promoter-TSS (NM_028793) -413 NR_149742 74159 Mm.181973 NM_028793 ENSMUSG00000026781 Acbd5 1300014E15Rik acyl-Coenzyme A binding domain containing 5 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-8 chr5 101766478 101766788 + 0.351190433797602 NA intron (NM_173370, intron 1 of 12) intron (NM_173370, intron 1 of 12) 1503 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-6 chr14 21075557 21075951 + 0.351190433797602 NA promoter-TSS (NM_001243041) promoter-TSS (NM_001243041) -398 NM_001243041 11534 Mm.188734 NM_134079 ENSMUSG00000039197 Adk 2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak adenosine kinase protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-10 chr8 36704936 36705370 + 0.351190433797602 NA intron (NM_001194940, intron 5 of 17) MIR|SINE|MIR 27901 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-4 chr16 33580552 33580781 + 0.351190433797602 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 62071 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding unique_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602 chr10 121740065 121740388 + 0.351190433797602 NA intron (NM_001359720, intron 1 of 2) intron (NM_001359720, intron 1 of 2) 296 NM_173022 270802 Mm.209172 NM_173022 ENSMUSG00000053684 BC048403 E030027L10 cDNA sequence BC048403 protein-coding common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-8 chr4 82165921 82166118 + 0.351190433797602 NA Intergenic Intergenic -100129 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602 chr12 17222604 17223239 + 0.351190433797602 NA Intergenic MLT1A|LTR|ERVL-MaLR -43674 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-3 chr15 25443787 25443991 + 0.351190433797602 NA intron (NR_027376, intron 1 of 1) intron (NR_027376, intron 1 of 1) 29697 NR_027376 432939 Mm.146555 NM_001013791 Gm5468 100040583|EG432939 predicted gene 5468 ncRNA common_peak1_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-11 chr8 24402466 24402791 + 0.351190433797602 NA Intergenic Intergenic 36318 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-6 chr2 32775137 32775413 + 0.351190433797602 NA promoter-TSS (NM_001290567) promoter-TSS (NM_001290567) 64 NM_001290564 338348 Mm.475130 NM_177384 ENSMUSG00000039021 Ttc16 1200002K10Rik tetratricopeptide repeat domain 16 protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-7 chr15 98933495 98933851 + 0.351190433797602 NA intron (NM_011654, intron 1 of 3) intron (NM_011654, intron 1 of 3) 717 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-12 chrX 95166035 95166392 + 0.351190433797602 NA 5' UTR (NM_001290385, exon 1 of 10) 5' UTR (NM_001290385, exon 1 of 10) 326 NM_001290385 236915 Mm.44841 NM_001033329 ENSMUSG00000025656 Arhgef9 9630036L12Rik CDC42 guanine nucleotide exchange factor (GEF) 9 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-9 chr7 45433802 45434141 + 0.351190433797602 NA promoter-TSS (NM_030678) promoter-TSS (NM_030678) 493 NM_011304 20174 Mm.34410 NM_011304 ENSMUSG00000003868 Ruvbl2 mp47|p47 RuvB-like protein 2 protein-coding unique_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-2 chr11 73198693 73198969 + 0.351190433797602 NA promoter-TSS (NM_029031) promoter-TSS (NM_029031) 188 NM_031251 83429 Mm.259852 NM_031251 ENSMUSG00000005949 Ctns AI195360|AW049661 cystinosis, nephropathic protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-11 chr9 79718291 79718573 + 0.351190433797602 NA 5' UTR (NM_001290308, exon 1 of 66) 5' UTR (NM_001290308, exon 1 of 66) 290 NM_001290308 12816 Mm.3819 NM_007730 ENSMUSG00000032332 Col12a1 - collagen, type XII, alpha 1 protein-coding common_peak2_21_21_-0.273201236466993_4.3228310004038_0.351190433797602-5 chr16 43698636 43698873 + 0.351190433797602 NA Intergenic Intergenic -34570 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-6 chr15 64005785 64006018 + 0.351190433797598 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) -7835 NM_001360035 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-5 chr19 4924484 4924856 + 0.351190433797598 NA intron (NM_001360711, intron 2 of 17) intron (NM_001360711, intron 2 of 17) 3300 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-3 chr1 131124249 131124750 + 0.351190433797598 NA Intergenic URR1A|DNA|hAT-Charlie 13735 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-4 chr5 36988402 36988803 + 0.351190433797598 NA intron (NM_011716, intron 1 of 7) CpG 380 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin wolframin ER transmembrane glycoprotein protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-12 chr3 81377147 81377546 + 0.351190433797598 NA Intergenic Intergenic 340930 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598 chr1 79704147 79704402 + 0.351190433797598 NA 3' UTR (NM_001111279, exon 12 of 12) 3' UTR (NM_001111279, exon 12 of 12) -32302 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding unique_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-2 chr15 80075642 80075929 + 0.351190433797598 NA Intergenic Intergenic 2794 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-4 chr15 96769899 96770173 + 0.351190433797598 NA Intergenic Intergenic -70308 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-14 chr7 29518237 29518495 + 0.351190433797598 NA Intergenic CpG -12906 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-6 chr7 65980102 65980522 + 0.351190433797598 NA exon (NM_001291184, exon 12 of 21) exon (NM_001291184, exon 12 of 21) -80024 NR_152094 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-12 chr7 127769398 127769676 + 0.351190433797598 NA promoter-TSS (NM_198424) promoter-TSS (NM_198424) -278 NM_198424 269999 Mm.36852 NM_198424 ENSMUSG00000043964 Orai3 9930124N15|BC061259|Tmem142c ORAI calcium release-activated calcium modulator 3 protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598 chr1 64088760 64089084 + 0.351190433797598 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 32467 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-8 chr18 11940600 11940898 + 0.351190433797598 NA intron (NM_022021, intron 7 of 8) intron (NM_022021, intron 7 of 8) -100311 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-2 chr10 23178880 23179184 + 0.351190433797598 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 170858 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-3 chr2 60546371 60546796 + 0.351190433797598 NA intron (NM_008867, intron 1 of 29) B1_Mus2|SINE|Alu 6725 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-7 chr7 139365081 139365437 + 0.351190433797598 NA Intergenic Intergenic -23850 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598 chr14 70516225 70516429 + 0.351190433797598 NA intron (NR_033241, intron 1 of 19) intron (NR_033241, intron 1 of 19) 3933 NM_009755 12153 Mm.27757 NM_009755 ENSMUSG00000022098 Bmp1 Pcp|Tld bone morphogenetic protein 1 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598 chr1 44552076 44552456 + 0.351190433797598 NA intron (NM_028450, intron 1 of 10) CpG 595 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-2 chr15 93397197 93397543 + 0.351190433797598 NA promoter-TSS (NM_175363) promoter-TSS (NM_175363) 964 NM_001347097 67197 Mm.293181 NM_026025 ENSMUSG00000022635 Zcrb1 2700088M22Rik|Madp-1 zinc finger CCHC-type and RNA binding motif 1 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-5 chr10 19192696 19192906 + 0.351190433797598 NA intron (NR_038021, intron 3 of 3) intron (NR_038021, intron 3 of 3) 25563 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-3 chr13 27732592 27733029 + 0.351190433797598 NA Intergenic Intergenic -16073 NM_011120 18814 Mm.3258 NM_011120 ENSMUSG00000021348 Prl7d1 Ghd19|PLF-RP|PRP|Plfr prolactin family 7, subfamily d, member 1 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-11 chr3 57522297 57522553 + 0.351190433797598 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 53451 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598 chr10 19597357 19597748 + 0.351190433797598 NA intron (NM_010511, intron 2 of 6) intron (NM_010511, intron 2 of 6) 5603 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-16 chr9 43239129 43239441 + 0.351190433797598 NA intron (NM_178644, intron 1 of 3) CpG 531 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-10 chr2 134786201 134786500 + 0.351190433797598 NA 5' UTR (NM_019677, exon 1 of 33) 5' UTR (NM_019677, exon 1 of 33) 186 NM_001145830 18795 Mm.330607 NM_019677 ENSMUSG00000051177 Plcb1 3110043I21Rik|AI132408|Plcb|mKIAA0581 phospholipase C, beta 1 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-19 chr9 123464627 123465006 + 0.351190433797598 NA Intergenic Intergenic -13885 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-7 chr8 11476375 11476756 + 0.351190433797598 NA intron (NM_011227, intron 1 of 1) intron (NM_011227, intron 1 of 1) -1364 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-4 chr14 21548594 21548944 + 0.351190433797598 NA intron (NM_017479, intron 2 of 16) intron (NM_017479, intron 2 of 16) 48984 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-3 chr19 60874168 60874514 + 0.351190433797598 NA intron (NM_007452, intron 1 of 6) intron (NM_007452, intron 1 of 6) 197 NM_007452 11757 Mm.29821 NM_007452 ENSMUSG00000024997 Prdx3 AW822249|Aop1|D0Tohi1|Ef2l|Mer5|Prx3|SP22|TDXM peroxiredoxin 3 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-6 chr11 68386600 68386835 + 0.351190433797598 NA 5' UTR (NM_008744, exon 1 of 7) 5' UTR (NM_008744, exon 1 of 7) 109 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-7 chr9 58247262 58247598 + 0.351190433797598 NA exon (NM_001311088, exon 2 of 9) exon (NM_001311088, exon 2 of 9) 2356 NM_008884 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-4 chr10 50592602 50592944 + 0.351190433797598 NA 5' UTR (NM_198007, exon 1 of 42) 5' UTR (NM_198007, exon 1 of 42) 104 NM_198007 77987 Mm.222497 NM_198007 ENSMUSG00000038774 Ascc3 ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-8 chr16 86808385 86808750 + 0.351190433797598 NA Intergenic Intergenic -2054 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-13 chr5 23386617 23386888 + 0.351190433797598 NA Intergenic Intergenic 47601 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-3 chr1 77461691 77462215 + 0.351190433797598 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 34815 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-6 chr2 173790658 173791241 + 0.351190433797598 NA Intergenic Intergenic 53378 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-15 chr9 63941407 63941699 + 0.351190433797598 NA Intergenic Intergenic 80506 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-11 chr6 117916523 117916841 + 0.351190433797598 NA promoter-TSS (NM_001166427) promoter-TSS (NM_001166427) -612 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-5 chr4 106896016 106896236 + 0.351190433797598 NA Intergenic Intergenic -15344 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598 chr1 16688401 16688696 + 0.351190433797598 NA promoter-TSS (NM_016923) promoter-TSS (NM_016923) 92 NM_001159711 17087 Mm.116844 NM_016923 ENSMUSG00000025779 Ly96 ESOP-1|MD-2|MD2 lymphocyte antigen 96 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-9 chr4 11762934 11763203 + 0.351190433797598 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 4911 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-11 chr5 125261931 125262318 + 0.351190433797598 NA Intergenic Intergenic 78970 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598 chr1 151230706 151231089 + 0.351190433797598 NA Intergenic Intergenic 92863 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-9 chr2 27539953 27540173 + 0.351190433797598 NA Intergenic Intergenic 24916 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-16 chr9 118607100 118607393 + 0.351190433797598 NA intron (NM_133721, intron 1 of 27) CpG 537 NM_133721 104099 Mm.335520 NM_133721 ENSMUSG00000039115 Itga9 (alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e integrin alpha 9 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-2 chr1 86487833 86488167 + 0.351190433797598 NA Intergenic CpG -38557 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598 chr10 24483707 24484056 + 0.351190433797598 NA Intergenic Intergenic -111561 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-10 chr4 153957320 153957549 + 0.351190433797598 NA intron (NM_001163019, intron 1 of 2) CpG 197 NM_001163019 97159 Mm.7066 NM_175287 ENSMUSG00000047613 A430005L14Rik C79672 RIKEN cDNA A430005L14 gene protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-7 chr3 65929727 65929977 + 0.351190433797598 NA Intergenic Intergenic 28397 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-4 chr1 192092149 192092495 + 0.351190433797598 NA 5' UTR (NM_011633, exon 1 of 10) 5' UTR (NM_011633, exon 1 of 10) 277 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-17 chr9 72837569 72838123 + 0.351190433797598 NA intron (NM_175485, intron 2 of 19) ID4_|SINE|ID 30572 NM_175485 235472 Mm.31696 NM_175485 ENSMUSG00000036030 Prtg A230098A12Rik|Igdcc5 protogenin protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-8 chr9 103073589 103073806 + 0.351190433797598 NA intron (NM_033314, intron 8 of 13) intron (NM_033314, intron 8 of 13) -38377 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-6 chr2 103670549 103670880 + 0.351190433797598 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 90556 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-7 chr15 103059556 103059906 + 0.351190433797598 NA Intergenic Intergenic 25336 NM_013553 15423 Mm.1351 NM_013553 ENSMUSG00000075394 Hoxc4 Hox-3.5 homeobox C4 protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-10 chr5 72808767 72809118 + 0.351190433797598 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -56165 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-15 chr6 114458606 114458828 + 0.351190433797598 NA intron (NM_001317124, intron 1 of 1) intron (NM_001317124, intron 1 of 1) 195 NM_001317124 15465 Mm.333327 NM_008285 ENSMUSG00000053004 Hrh1 Bphs|H1R|HH1R|Hir histamine receptor H1 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-13 chr6 128760195 128760456 + 0.351190433797598 NA Intergenic CpG 28316 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Klrb1b|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1b|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-13 chr8 11339884 11340152 + 0.351190433797598 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -27192 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-3 chr14 122982753 122983042 + 0.351190433797598 NA intron (NM_001360598, intron 1 of 18) CpG 245 NM_001360599 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-2 chr1 53313134 53313578 + 0.351190433797598 NA promoter-TSS (NR_104361) promoter-TSS (NR_104361) -268 NM_001285839 72085 Mm.482256 NM_028091 ENSMUSG00000026096 Osgepl1 2610001M19Rik|AA416452 O-sialoglycoprotein endopeptidase-like 1 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-6 chr7 73961850 73962311 + 0.351190433797598 NA intron (NM_009181, intron 4 of 5) intron (NM_009181, intron 4 of 5) 51602 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding unique_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-3 chr8 120063861 120064329 + 0.351190433797598 NA Intergenic ID_B1|SINE|B4 37377 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-5 chr7 66575750 66576008 + 0.351190433797598 NA Intergenic Intergenic 113682 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-2 chr11 69621997 69622529 + 0.351190433797598 NA 5' UTR (NM_001356469, exon 1 of 4) 5' UTR (NM_001356469, exon 1 of 4) 211 NM_001356468 69215 Mm.340410 NM_026991 ENSMUSG00000069835 Sat2 2610016A03Rik|SSAT-2|SSAT2 spermidine/spermine N1-acetyl transferase 2 protein-coding unique_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-2 chr10 84437547 84438014 + 0.351190433797598 NA intron (NM_001004363, intron 1 of 6) intron (NM_001004363, intron 1 of 6) 2691 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-12 chr6 127329256 127329471 + 0.351190433797598 NA Intergenic Intergenic -21396 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-8 chr3 89392951 89393186 + 0.351190433797598 NA promoter-TSS (NM_001355211) promoter-TSS (NM_001355211) 310 NM_009565 22724 Mm.262184 NM_009565 ENSMUSG00000028042 Zbtb7b Thpok|Zfp67|c-Krox zinc finger and BTB domain containing 7B protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-18 chr9 99164076 99164310 + 0.351190433797598 NA Intergenic Intergenic -23982 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-14 chr8 70682640 70683045 + 0.351190433797598 NA Intergenic Intergenic 9611 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-4 chr2 164435817 164436204 + 0.351190433797598 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 7178 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-5 chr14 52304395 52304723 + 0.351190433797598 NA intron (NM_019721, intron 1 of 10) intron (NM_019721, intron 1 of 10) 565 NM_019721 56335 Mm.271759 NM_019721 ENSMUSG00000022160 Mettl3 2310024F18Rik|M6A|Spo8 methyltransferase like 3 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-14 chr6 42508891 42509279 + 0.351190433797598 NA Intergenic Intergenic -21871 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak1_25_18_0.177610661011528_4.33673284394935_0.351190433797598-9 chr9 108507401 108507803 + 0.351190433797598 NA promoter-TSS (NM_133794) promoter-TSS (NM_133794) -403 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding common_peak2_25_18_0.177610661011528_4.33673284394935_0.351190433797598-5 chr18 67800212 67800447 + 0.351190433797598 NA promoter-TSS (NR_045376) promoter-TSS (NR_045376) 222 NM_027556 70799 Mm.30857 NM_027556 ENSMUSG00000024542 Cep192 4631422C13Rik|D430014P18Rik centrosomal protein 192 protein-coding common_peak1_24_18_0.121426328281967_4.30864067758457_0.351190433797598-7 chr15 89428975 89429269 + 0.351190433797598 NA non-coding (NR_004843, exon 2 of 27) non-coding (NR_004843, exon 2 of 27) 805 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak2_24_18_0.121426328281967_4.30864067758457_0.351190433797598-9 chr3 19428430 19428734 + 0.351190433797598 NA Intergenic Intergenic -80013 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak2_91_81_-0.121753682395073_6.29667516342055_0.351153259497152 chr19 34878154 34879404 + 0.351153259497152 NA promoter-TSS (NM_023792) promoter-TSS (NM_023792) 676 NM_001114339 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding common_peak1_91_81_-0.121753682395073_6.29667516342055_0.351153259497152-2 chr8 119557920 119558773 + 0.351153259497152 NA intron (NM_019709, intron 1 of 23) intron (NM_019709, intron 1 of 23) 415 NM_001167910 56453 Mm.206934 NM_019709 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 protein-coding common_peak1_98_75_0.0929190936083835_6.29438706024778_0.351153259497152-2 chr8 83601853 83602713 + 0.351153259497152 NA Intergenic PB1D10|SINE|Alu -5892 NM_018808 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_91_81_-0.121753682395073_6.29667516342055_0.351153259497152 chr16 55816237 55817159 + 0.351153259497152 NA intron (NM_001159395, intron 7 of 12) intron (NM_001159395, intron 7 of 12) 5440 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_98_75_0.0929190936083835_6.29438706024778_0.351153259497152 chr11 97440097 97441126 + 0.351153259497152 NA Intergenic CpG -9549 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_90_81_-0.137409760162085_6.28884712453704_0.351153259497152 chr17 33954829 33955638 + 0.351153259497152 NA promoter-TSS (NM_001357330) promoter-TSS (NM_001357330) 408 NM_011296 20084 Mm.298745 NM_011296 ENSMUSG00000008668 Rps18 H-2Ke3|H2-Ke3|Ke-3|ke3 ribosomal protein S18 protein-coding common_peak1_98_75_0.0929190936083835_6.29438706024778_0.351153259497152 chr8 13105782 13106658 + 0.351153259497152 NA promoter-TSS (NM_178708) promoter-TSS (NM_178708) 499 NM_146207 99375 Mm.212861 NM_146207 ENSMUSG00000031446 Cul4a 2810470J21Rik|AW495282 cullin 4A protein-coding common_peak1_272_212_0.0592132468843714_7.76431624366802_0.351068350339208 chr11 96351855 96354917 + 0.351068350339208 NA promoter-TSS (NR_155303) promoter-TSS (NR_155303) 8 NR_155303 102632302 Mm.281153 NR_155303 Hoxb3os Gm11530|Hoxb3s homeobox B3 and homeobox B2, opposite strand ncRNA common_peak2_174_135_0.0694400909028552_7.12218288670177_0.35102762935519 chr10 115384478 115386051 + 0.35102762935519 NA promoter-TSS (NM_025780) promoter-TSS (NM_025780) 305 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding common_peak1_125_110_-0.108100547676515_6.74036559251185_0.350993051678368 chr4 55350108 55350990 + 0.350993051678368 NA intron (NM_009011, intron 1 of 9) CpG 507 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak1_62_57_-0.164610696880738_5.7756756466872_0.350851889851556-3 chr13 55212068 55212662 + 0.350851889851556 NA intron (NM_008739, intron 1 of 22) CpG 2583 NM_008739 18193 Mm.168965 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_62_57_-0.164610696880738_5.7756756466872_0.350851889851556 chr13 60896297 60897339 + 0.350851889851556 NA intron (NM_007797, intron 1 of 4) Lx9|LINE|L1 629 NM_007797 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding common_peak1_62_57_-0.164610696880738_5.7756756466872_0.350851889851556-4 chr13 98355141 98355979 + 0.350851889851556 NA exon (NM_008242, exon 1 of 1) exon (NM_008242, exon 1 of 1) 1315 NM_008242 15229 Mm.347441 NM_008242 ENSMUSG00000078302 Foxd1 AI385632|BF-2|FREAC4|Hfh10|Hfhbf2 forkhead box D1 protein-coding common_peak2_69_52_0.11638055840936_5.78611073376788_0.350851889851556 chr12 69296427 69297195 + 0.350851889851556 NA 5' UTR (NM_027117, exon 1 of 13) 5' UTR (NM_027117, exon 1 of 13) 130 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding common_peak2_68_52_0.0957684494605102_5.77580467929345_0.350851889851556-2 chr18 36521223 36522047 + 0.350851889851556 NA Intergenic Intergenic -5830 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_62_57_-0.164610696880738_5.7756756466872_0.350851889851556-5 chr17 27634487 27635180 + 0.350851889851556 NA intron (NM_025963, intron 1 of 5) intron (NM_025963, intron 1 of 5) 409 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding common_peak2_68_52_0.0957684494605102_5.77580467929345_0.350851889851556-3 chr19 38041425 38042275 + 0.350851889851556 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 1727 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_69_52_0.11638055840936_5.78611073376788_0.350851889851556-2 chr3 90052924 90053442 + 0.350851889851556 NA promoter-TSS (NM_001165984) promoter-TSS (NM_001165984) 381 NM_027500 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak1_62_57_-0.164610696880738_5.7756756466872_0.350851889851556-2 chr1 162134464 162135477 + 0.350851889851556 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -82653 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_62_57_-0.164610696880738_5.7756756466872_0.350851889851556 chr1 60180697 60181358 + 0.350851889851556 NA intron (NM_173444, intron 1 of 54) intron (NM_173444, intron 1 of 54) 428 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak2_62_57_-0.164610696880738_5.7756756466872_0.350851889851556-2 chr9 65909042 65909888 + 0.350851889851556 NA promoter-TSS (NM_019797) promoter-TSS (NM_019797) 455 NM_173185 214897 Mm.325816 NM_173185 ENSMUSG00000032384 Csnk1g1 9130020E21Rik casein kinase 1, gamma 1 protein-coding common_peak2_68_52_0.0957684494605102_5.77580467929345_0.350851889851556 chr11 99658207 99659059 + 0.350851889851556 NA exon (NM_001126320, exon 1 of 1) exon (NM_001126320, exon 1 of 1) 326 NM_001126320 100040248 Mm.340791 NM_001126320 ENSMUSG00000069718 Gm11563 2310045F10Rik predicted gene 11563 protein-coding common_peak1_69_52_0.11638055840936_5.78611073376788_0.350851889851556 chr7 81828782 81829398 + 0.350851889851556 NA exon (NM_146193, exon 1 of 8) exon (NM_146193, exon 1 of 8) 341 NM_146193 83962 Mm.439893 NM_146193 ENSMUSG00000025103 Btbd1 1190005H08Rik BTB (POZ) domain containing 1 protein-coding common_peak1_69_52_0.11638055840936_5.78611073376788_0.350851889851556-2 chr8 46210100 46210952 + 0.350851889851556 NA intron (NM_007450, intron 1 of 3) intron (NM_007450, intron 1 of 3) 536 NM_007450 11739 Mm.16228 NM_007450 ENSMUSG00000031633 Slc25a4 AU019225|Ant1|mANC1 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 protein-coding common_peak1_68_52_0.0957684494605102_5.77580467929345_0.350851889851556-2 chr6 88518181 88518649 + 0.350851889851556 NA exon (NM_016906, exon 2 of 12) exon (NM_016906, exon 2 of 12) 385 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak1_68_52_0.0957684494605102_5.77580467929345_0.350851889851556 chr2 78869033 78870183 + 0.350851889851556 NA promoter-TSS (NR_151458) promoter-TSS (NR_151458) -70 NR_151458 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-9 chr5 24684967 24685429 + 0.350690697593776 NA promoter-TSS (NM_016736) promoter-TSS (NM_016736) -617 NM_016736 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-8 chr19 58104123 58104554 + 0.350690697593776 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 53171 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-6 chr19 18758672 18759030 + 0.350690697593776 NA intron (NM_153417, intron 1 of 38) intron (NM_153417, intron 1 of 38) 8868 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-14 chr8 94979751 94980317 + 0.350690697593776 NA intron (NM_001198894, intron 1 of 13) intron (NM_001198894, intron 1 of 13) 2925 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-10 chr8 84004937 84005450 + 0.350690697593776 NA promoter-TSS (NR_106191) promoter-TSS (NR_106191) -435 NR_106191 102466886 NR_106191 ENSMUSG00000098823 Mir8111 Gm27823|mmu-mir-8111 microRNA 8111 ncRNA common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-4 chr15 53133923 53134589 + 0.350690697593776 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 211927 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_44_33_0.123905306176245_5.14941549433846_0.350690697593776-2 chr4 48541803 48542264 + 0.350690697593776 NA intron (NM_028137, intron 1 of 2) intron (NM_028137, intron 1 of 2) 1534 NM_028137 66665 Mm.140749 NM_028137 ENSMUSG00000039693 Msantd3 2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3 Myb/SANT-like DNA-binding domain containing 3 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-2 chr11 62221675 62222351 + 0.350690697593776 NA 3' UTR (NM_001281818, exon 15 of 15) 3' UTR (NM_001281818, exon 15 of 15) -26971 NM_007413 11541 Mm.40740 NM_007413 ENSMUSG00000018500 Adora2b A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384 adenosine A2b receptor protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-8 chr5 114648957 114649432 + 0.350690697593776 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 9227 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak2_44_33_0.123905306176245_5.14941549433846_0.350690697593776-3 chr4 139534151 139534760 + 0.350690697593776 NA intron (NM_183148, intron 3 of 11) intron (NM_183148, intron 3 of 11) 3907 NM_183148 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding unique_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-2 chr8 123948628 123949152 + 0.350690697593776 NA intron (NM_172288, intron 1 of 25) CpG 375 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-7 chr4 11828447 11829221 + 0.350690697593776 NA Intergenic Intergenic 70677 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-12 chr4 141424982 141425699 + 0.350690697593776 NA TTS (NM_013868) TTS (NM_013868) 4561 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-13 chr9 100546312 100546828 + 0.350690697593776 NA promoter-TSS (NM_010878) promoter-TSS (NM_010878) -436 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding unique_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776 chr3 109165607 109166171 + 0.350690697593776 NA intron (NM_172685, intron 9 of 9) intron (NM_172685, intron 9 of 9) 42740 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-7 chr2 151740810 151741303 + 0.350690697593776 NA exon (NM_212446, exon 1 of 7) exon (NM_212446, exon 1 of 7) 254 NM_212446 228769 Mm.146984 NM_144889 ENSMUSG00000032869 Psmf1 AW048666|BC012260|PI31 proteasome (prosome, macropain) inhibitor subunit 1 protein-coding unique_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776 chr3 9001599 9002104 + 0.350690697593776 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 2353 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-5 chr17 36257461 36257907 + 0.350690697593776 NA exon (NM_026308, exon 2 of 5) exon (NM_026308, exon 2 of 5) 162 NM_026308 67676 Mm.27131 NM_026308 ENSMUSG00000024446 Rpp21 0610037N01Rik ribonuclease P 21 subunit protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-9 chr2 52955600 52955900 + 0.350690697593776 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 97882 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776 chr11 5541612 5542176 + 0.350690697593776 NA exon (NM_134033, exon 1 of 5) exon (NM_134033, exon 1 of 5) 323 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-2 chr11 43546251 43546720 + 0.350690697593776 NA intron (NM_001045530, intron 2 of 5) intron (NM_001045530, intron 2 of 5) 17736 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-10 chr3 117868538 117868834 + 0.350690697593776 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 250 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-6 chr2 35269987 35270588 + 0.350690697593776 NA intron (NM_001206367, intron 2 of 17) (ATG)n|Simple_repeat|Simple_repeat 3543 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-6 chr18 52527999 52528427 + 0.350690697593776 NA intron (NM_001286182, intron 3 of 7) intron (NM_001286182, intron 3 of 7) 1508 NM_001286181 16948 Mm.172 NM_010728 ENSMUSG00000024529 Lox AI893619|TSC-160|rrg lysyl oxidase protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-11 chr8 122186151 122186400 + 0.350690697593776 NA Intergenic Intergenic -95866 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-2 chr1 182408272 182408926 + 0.350690697593776 NA promoter-TSS (NM_173378) promoter-TSS (NM_173378) -568 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776 chr10 41450471 41450700 + 0.350690697593776 NA intron (NR_102360, intron 1 of 6) CpG 227 NR_102360 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak2_44_33_0.123905306176245_5.14941549433846_0.350690697593776 chr14 12284244 12284715 + 0.350690697593776 NA intron (NM_001284384, intron 1 of 4) CpG 276 NM_001284386 218734 Mm.44068 NM_146051 ENSMUSG00000033111 3830406C13Rik - RIKEN cDNA 3830406C13 gene protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-5 chr19 23090774 23091507 + 0.350690697593776 NA Intergenic Intergenic -50086 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-3 chr11 70237999 70238486 + 0.350690697593776 NA promoter-TSS (NM_001177603) promoter-TSS (NM_001177603) -328 NM_145758 104457 Mm.30016 NM_026757 ENSMUSG00000020831 0610010K14Rik 1110020A23Rik|AL033328|AU045833|Bap18 RIKEN cDNA 0610010K14 gene protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-8 chr4 108834783 108835309 + 0.350690697593776 NA promoter-TSS (NM_001356361) promoter-TSS (NM_001356361) 368 NM_025334 66073 Mm.159965 NM_025334 ENSMUSG00000028567 Txndc12 0610040B21Rik|ERp16|ERp19 thioredoxin domain containing 12 (endoplasmic reticulum) protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-4 chr16 20097586 20098155 + 0.350690697593776 NA intron (NM_029436, intron 1 of 7) CpG 316 NM_029436 75785 Mm.392450 NM_029436 ENSMUSG00000062901 Klhl24 1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082 kelch-like 24 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-5 chr19 5432351 5433090 + 0.350690697593776 NA Intergenic ID_B1|SINE|B4 7576 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-13 chr7 43787378 43787983 + 0.350690697593776 NA Intergenic Intergenic -4211 NM_028660 101533 Mm.19942 NM_028660 ENSMUSG00000047884 Klk9 1200016C12Rik|AI324041 kallikrein related-peptidase 9 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-4 chr18 68058033 68058546 + 0.350690697593776 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 125116 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-3 chr11 108364538 108365150 + 0.350690697593776 NA Intergenic Intergenic -20956 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776 chr1 155973438 155973851 + 0.350690697593776 NA promoter-TSS (NM_001039184) promoter-TSS (NM_001039184) -389 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-3 chr17 32320329 32320926 + 0.350690697593776 NA TTS (NM_017476) TTS (NM_017476) 611 NM_001357760 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-7 chr19 44909345 44909707 + 0.350690697593776 NA Intergenic Intergenic -21593 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak1_39_37_-0.205285550045155_5.14528473842101_0.350690697593776-12 chr9 77917538 77918194 + 0.350690697593776 NA intron (NM_134255, intron 1 of 7) CpG 501 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak1_44_33_0.123905306176245_5.14941549433846_0.350690697593776-11 chr3 154596755 154597112 + 0.350690697593776 NA promoter-TSS (NM_001357674) promoter-TSS (NM_001357674) 165 NM_001168358 209584 Mm.347513 NM_172474 ENSMUSG00000047583 Tyw3 5230400J09Rik tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) protein-coding common_peak1_175_136_0.0670333604900462_7.13154876320555_0.350670405822887 chr12 104064027 104065726 + 0.350670405822887 NA Intergenic Intergenic -13083 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak2_175_136_0.0670333604900462_7.13154876320555_0.350670405822887 chr19 10203516 10204605 + 0.350670405822887 NA promoter-TSS (NM_026919) promoter-TSS (NM_026919) 109 NM_007999 14156 Mm.2952 NM_007999 ENSMUSG00000024742 Fen1 AW538437|FEN-1 flap structure specific endonuclease 1 protein-coding common_peak1_166_144_-0.0900367179883901_7.13489073102074_0.350670405822887 chr17 84510759 84512758 + 0.350670405822887 NA promoter-TSS (NM_177606) promoter-TSS (NM_177606) -137 NM_001357986 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding common_peak1_274_214_0.0561863913688674_7.77628604527389_0.350611299271312 chr9 45953108 45955631 + 0.350611299271312 NA non-coding (NR_152206, exon 1 of 1) non-coding (NR_152206, exon 1 of 1) 383 NR_152206 100101457 Mm.397964 NR_152206 ENSMUSG00000111329 A830035O19Rik - RIKEN cDNA A830035O19 gene ncRNA common_peak2_92_82_-0.123754289566688_6.31316228656358_0.350518480579152-2 chr2 181287059 181287925 + 0.350518480579152 NA intron (NM_198169, intron 1 of 9) intron (NM_198169, intron 1 of 9) 474 NM_198169 229004 Mm.220423 NM_198169 ENSMUSG00000038705 Gmeb2 AI839884 glucocorticoid modulatory element binding protein 2 protein-coding common_peak1_99_76_0.0884573418841628_6.31101521163698_0.350518480579152 chr19 18891529 18892400 + 0.350518480579152 NA intron (NM_153417, intron 38 of 38) intron (NM_153417, intron 38 of 38) 109153 NM_146095 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding common_peak2_99_76_0.0884573418841628_6.31101521163698_0.350518480579152 chr1 128244132 128245085 + 0.350518480579152 NA intron (NM_001356529, intron 1 of 12) CpG 471 NM_001356529 67812 Mm.293321 NM_026390 ENSMUSG00000026353 Ubxn4 1300013G12Rik|Ubxd2|mKIAA0242 UBX domain protein 4 protein-coding common_peak2_99_76_0.0884573418841628_6.31101521163698_0.350518480579152-2 chr19 57197222 57198550 + 0.350518480579152 NA promoter-TSS (NM_001290816) promoter-TSS (NM_001290816) -255 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_99_76_0.0884573418841628_6.31101521163698_0.350518480579152-3 chr5 27790845 27792134 + 0.350518480579152 NA promoter-TSS (NM_018878) promoter-TSS (NM_018878) 61 NM_018878 55982 Mm.277190 NM_018878 ENSMUSG00000002221 Paxip1 D5Ertd149e|PTIP PAX interacting (with transcription-activation domain) protein 1 protein-coding common_peak1_92_82_-0.123754289566688_6.31316228656358_0.350518480579152 chr15 5115582 5116391 + 0.350518480579152 NA promoter-TSS (NM_026069) promoter-TSS (NM_026069) -627 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding common_peak2_92_82_-0.123754289566688_6.31316228656358_0.350518480579152 chr17 69226837 69227520 + 0.350518480579152 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 50028 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA common_peak2_224_174_0.0657039752016448_7.48406309943315_0.350303917493299 chr19 6363915 6365094 + 0.350303917493299 NA intron (NM_001360393, intron 1 of 11) CpG 814 NR_122118 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak2_710_558_0.0384244387405079_9.14591669221344_0.350139134146358 chr16 45840714 45845359 + 0.350139134146358 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 1342 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_128_112_-0.100155809551545_6.77010105763942_0.350071751020783 chr16 55630449 55632068 + 0.350071751020783 NA Intergenic Intergenic 136527 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_127_112_-0.111303856917124_6.76452703395663_0.350071751020783 chr3 145118030 145119493 + 0.350071751020783 NA 5' UTR (NM_001162539, exon 1 of 15) 5' UTR (NM_001162539, exon 1 of 15) 161 NM_025714 52184 Mm.259105 NM_025714 ENSMUSG00000028256 Odf2l 4733401D09Rik|9630045K08Rik|D3Ertd250e outer dense fiber of sperm tails 2-like protein-coding common_peak2_127_112_-0.111303856917124_6.76452703395663_0.350071751020783-2 chr7 29247593 29248429 + 0.350071751020783 NA TTS (NM_001110201) TTS (NM_001110201) 456 NM_028179 72275 Mm.441142 NM_028179 ENSMUSG00000030587 2200002D01Rik 2010005J02Rik|H2RSP|IMUP|IMUP-1|IMUP-2 RIKEN cDNA 2200002D01 gene protein-coding common_peak2_128_112_-0.100155809551545_6.77010105763942_0.350071751020783-2 chr6 113604427 113605879 + 0.350071751020783 NA intron (NM_133937, intron 1 of 2) CpG 381 NM_133937 101314 Mm.485793 NM_133937 ENSMUSG00000033940 Brk1 6720456B07Rik|AW011779 BRICK1, SCAR/WAVE actin-nucleating complex subunit protein-coding common_peak2_127_112_-0.111303856917124_6.76452703395663_0.350071751020783 chr5 114370680 114372493 + 0.350071751020783 NA intron (NM_001159941, intron 2 of 6) intron (NM_001159941, intron 2 of 6) 8919 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak1_136_105_0.0782951195525809_6.76706801433949_0.350071751020758 chr10 31608235 31609643 + 0.350071751020758 NA exon (NM_001146349, exon 1 of 6) exon (NM_001146349, exon 1 of 6) 786 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding common_peak1_136_105_0.0782951195525809_6.76706801433949_0.350071751020758-2 chr4 131873268 131874425 + 0.350071751020758 NA exon (NM_020587, exon 1 of 6) exon (NM_020587, exon 1 of 6) 207 NM_020587 57317 Mm.2478 NM_020587 ENSMUSG00000028911 Srsf4 5730499P16Rik|AW550192|MNCb-2616|SRp75|Sfrs4 serine/arginine-rich splicing factor 4 protein-coding common_peak2_136_105_0.0782951195525809_6.76706801433949_0.350071751020758 chr5 117114850 117116249 + 0.350071751020758 NA intron (NM_001122666, intron 1 of 12) CpG 444 NM_001122666 71954 Mm.34456 NM_178622 ENSMUSG00000066900 Suds3 2400003N08Rik|2410008L21Rik|AU067672|mSds3 suppressor of defective silencing 3 homolog (S. cerevisiae) protein-coding common_peak1_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-2 chr11 107470048 107470674 + 0.349953584539098 NA non-coding (NR_153311, exon 1 of 10) non-coding (NR_153311, exon 1 of 10) 359 NR_153311 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-5 chr2 156547212 156548250 + 0.349953584539098 NA 5' UTR (NM_001164818, exon 1 of 5) 5' UTR (NM_001164818, exon 1 of 5) 155 NM_001164818 68295 Mm.253648 NM_026661 ENSMUSG00000027628 Aar2 0610011L14Rik AAR2 splicing factor homolog protein-coding common_peak2_63_58_-0.166712964290534_5.79928656721657_0.349953584539098-3 chr13 35741490 35742249 + 0.349953584539098 NA exon (NM_001123386, exon 1 of 7) exon (NM_001123386, exon 1 of 7) 467 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak1_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-4 chr17 28349882 28350685 + 0.349953584539098 NA promoter-TSS (NM_001204156) promoter-TSS (NM_001204156) 63 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak2_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-3 chr17 44708859 44709804 + 0.349953584539098 NA intron (NM_001271627, intron 4 of 7) intron (NM_001271627, intron 4 of 7) 26845 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_63_58_-0.166712964290534_5.79928656721657_0.349953584539098 chr13 21530760 21531380 + 0.349953584539098 NA promoter-TSS (NM_001251833) promoter-TSS (NM_001251833) 44 NM_139141 93681 Mm.290601 NM_139141 ENSMUSG00000063894 Zkscan8 2510038J07Rik|D430019P06Rik|LD5-1|Zfp192 zinc finger with KRAB and SCAN domains 8 protein-coding common_peak1_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-3 chr17 12790690 12791453 + 0.349953584539098 NA intron (NR_027784, intron 2 of 2) intron (NR_027784, intron 2 of 2) -21365 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak1_64_58_-0.144502955726094_5.81039157149879_0.349953584539098 chr10 71155700 71156257 + 0.349953584539098 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 3712 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_70_53_0.109733239543263_5.8097541219351_0.349953584539098-2 chr4 84545094 84546018 + 0.349953584539098 NA intron (NM_172870, intron 2 of 5) CpG 129530 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_63_58_-0.166712964290534_5.79928656721657_0.349953584539098 chr10 25787933 25788757 + 0.349953584539098 NA intron (NR_045349, intron 3 of 4) intron (NR_045349, intron 3 of 4) 49092 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA common_peak2_63_58_-0.166712964290534_5.79928656721657_0.349953584539098-4 chr8 68307679 68308411 + 0.349953584539098 NA intron (NM_028182, intron 4 of 8) intron (NM_028182, intron 4 of 8) 31517 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak2_63_58_-0.166712964290534_5.79928656721657_0.349953584539098-2 chr11 58330704 58331895 + 0.349953584539098 NA promoter-TSS (NM_001256520) promoter-TSS (NM_001256520) 509 NM_001308168 79566 Mm.290534 NM_024480 ENSMUSG00000013646 Sh3bp5l 2310074E09Rik|BC003251|mKIAA1720 SH3 binding domain protein 5 like protein-coding common_peak2_64_58_-0.144502955726094_5.81039157149879_0.349953584539098 chr10 116581330 116582162 + 0.349953584539098 NA promoter-TSS (NM_028082) promoter-TSS (NM_028082) -235 NM_001359249 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak2_63_58_-0.166712964290534_5.79928656721657_0.349953584539098-5 chr9 46273317 46274336 + 0.349953584539098 NA intron (NM_011752, intron 2 of 13) intron (NM_011752, intron 2 of 13) 762 NM_011752 22687 Mm.17519 NM_011752 ENSMUSG00000032078 Zpr1 AI303781|Zfp259|Znf259 ZPR1 zinc finger protein-coding common_peak1_70_53_0.109733239543263_5.8097541219351_0.349953584539098 chr15 97786087 97786816 + 0.349953584539098 NA intron (NM_026353, intron 1 of 2) RLTR25B|LTR|ERVK 2086 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak1_70_53_0.109733239543263_5.8097541219351_0.349953584539098-3 chr4 145194271 145195008 + 0.349953584539098 NA intron (NM_001276465, intron 1 of 69) CpG 366 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak2_70_53_0.109733239543263_5.8097541219351_0.349953584539098 chr7 38229974 38231067 + 0.349953584539098 NA Intergenic Intergenic -2526 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-2 chr15 76368886 76369447 + 0.349953584539098 NA exon (NM_021555, exon 1 of 6) exon (NM_021555, exon 1 of 6) 268 NM_021555 59053 Mm.133202 NM_021555 ENSMUSG00000022554 Hgh1 Brp16|D15Ertd741e|Fam203a|MNCb-5873 HGH1 homolog protein-coding common_peak1_64_58_-0.144502955726094_5.81039157149879_0.349953584539098-6 chr3 95014490 95015319 + 0.349953584539098 NA intron (NM_001357863, intron 1 of 8) CpG 334 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak1_93_83_-0.12571109904995_6.32946187325379_0.34989958244832 chr2 69861582 69862913 + 0.34989958244832 NA intron (NM_009278, intron 1 of 11) intron (NM_009278, intron 1 of 11) 685 NM_009278 20823 Mm.10508 NM_009278 ENSMUSG00000068882 Ssb SS-B Sjogren syndrome antigen B protein-coding common_peak1_100_77_0.0840956803951647_6.32745005905983_0.34989958244832 chr16 32430488 32431665 + 0.34989958244832 NA promoter-TSS (NM_001163159) promoter-TSS (NM_001163159) 56 NM_001163159 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak2_93_83_-0.12571109904995_6.32946187325379_0.34989958244832-3 chr15 65787017 65787896 + 0.34989958244832 NA intron (NM_133766, intron 1 of 22) CpG 436 NM_001356582 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak1_100_77_0.0840956803951647_6.32745005905983_0.34989958244832-2 chr8 32286508 32287517 + 0.34989958244832 NA Intergenic Intergenic 135117 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA common_peak2_93_83_-0.12571109904995_6.32946187325379_0.34989958244832-2 chr15 7863277 7863948 + 0.34989958244832 NA Intergenic Intergenic 48062 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_93_83_-0.12571109904995_6.32946187325379_0.34989958244832 chr13 14062182 14063386 + 0.34989958244832 NA promoter-TSS (NM_198122) promoter-TSS (NM_198122) 704 NM_001331119 14593 Mm.148039 NM_010282 ENSMUSG00000021302 Ggps1 1810026C22Rik|9530089B04Rik|AI843169|C79210 geranylgeranyl diphosphate synthase 1 protein-coding common_peak2_93_83_-0.12571109904995_6.32946187325379_0.34989958244832-4 chr2 155804987 155806086 + 0.34989958244832 NA intron (NM_010808, intron 4 of 8) intron (NM_010808, intron 4 of 8) 13667 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_101_77_0.0982092611284129_6.33450684942646_0.34989958244832-2 chr8 47713241 47713955 + 0.34989958244832 NA exon (NM_172407, exon 1 of 3) exon (NM_172407, exon 1 of 3) 333 NM_001359133 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak2_101_77_0.0982092611284129_6.33450684942646_0.34989958244832 chr16 10974744 10976058 + 0.34989958244832 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 17720 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_267_228_-0.071760729603044_7.80332342329542_0.349721798091656 chr18 36414644 36417305 + 0.349721798091656 NA intron (NM_026027, intron 3 of 3) RSINE1|SINE|B4 38521 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_169_147_-0.094075568685108_7.1624155812864_0.349628723957445 chr12 101082551 101083970 + 0.349628723957445 NA non-coding (NR_038047, exon 1 of 4) non-coding (NR_038047, exon 1 of 4) 442 NM_211355 68734 Mm.87077 NM_211355 ENSMUSG00000041846 Ppp4r3a 1110034C04Rik|BC064465|Smek1|mKIAA2010 protein phosphatase 4 regulatory subunit 3A protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757 chr1 43165139 43165750 + 0.349309791294757 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) -1483 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-6 chr17 63677701 63678468 + 0.349309791294757 NA Intergenic Intergenic -177504 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-7 chr7 127273623 127274018 + 0.349309791294757 NA exon (NM_009266, exon 1 of 1) exon (NM_009266, exon 1 of 1) 239 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-8 chr6 87183499 87183902 + 0.349309791294757 NA intron (NM_054041, intron 16 of 17) intron (NM_054041, intron 16 of 17) 78954 NM_001167937 52372 Mm.282851 NM_001167937 ENSMUSG00000090891 D6Ertd527e AU043841 DNA segment, Chr 6, ERATO Doi 527, expressed protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-8 chr8 68121903 68122577 + 0.349309791294757 NA Intergenic Intergenic -147666 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-5 chr5 91242018 91242580 + 0.349309791294757 NA Intergenic Intergenic 40777 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-9 chr8 111145716 111146069 + 0.349309791294757 NA promoter-TSS (NR_040363) promoter-TSS (NR_040363) -394 NR_040364 434350 Mm.442061 NR_040363 9430091E24Rik - RIKEN cDNA 9430091E24 gene ncRNA common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757 chr10 115362379 115363033 + 0.349309791294757 NA promoter-TSS (NM_001359470) promoter-TSS (NM_001359470) -205 NM_001359472 67226 Mm.29647 NM_133683 ENSMUSG00000069520 Tmem19 2810428F02Rik|AW125171 transmembrane protein 19 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-3 chr12 65073496 65073936 + 0.349309791294757 NA intron (NM_013902, intron 1 of 6) CpG 222 NM_013902 30795 Mm.28480 NM_013902 ENSMUSG00000020949 Fkbp3 25kDa|FKBP-3|FKBP25 FK506 binding protein 3 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-10 chr9 54638081 54638776 + 0.349309791294757 NA intron (NM_053178, intron 2 of 13) intron (NM_053178, intron 2 of 13) 23457 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-2 chr14 69707162 69707510 + 0.349309791294757 NA 5' UTR (NM_001301652, exon 1 of 7) 5' UTR (NM_001301652, exon 1 of 7) 157 NM_001301652 71843 Mm.27738 NM_001146012 ENSMUSG00000034194 R3hcc1 1700020M16Rik|AA407796 R3H domain and coiled-coil containing 1 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-7 chr2 60963066 60963457 + 0.349309791294757 NA promoter-TSS (NM_020296) promoter-TSS (NM_020296) -57 NM_020296 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-6 chr7 25077415 25077854 + 0.349309791294757 NA intron (NM_175477, intron 1 of 1) CpG 827 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-2 chr11 58024509 58025039 + 0.349309791294757 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 15710 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-3 chr19 6921282 6921754 + 0.349309791294757 NA TTS (NM_001039494) TTS (NM_001039494) 290 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-5 chr17 17845778 17846547 + 0.349309791294757 NA intron (NM_008215, intron 4 of 4) intron (NM_008215, intron 4 of 4) 9026 NM_008215 15116 Mm.255701 NM_008215 ENSMUSG00000003665 Has1 HAS hyaluronan synthase 1 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-4 chr2 165887186 165887833 + 0.349309791294757 NA Intergenic Intergenic -2671 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_45_34_0.113570284851289_5.18606815937061_0.349309791294757-4 chr17 5740493 5741049 + 0.349309791294757 NA intron (NM_146073, intron 8 of 8) intron (NM_146073, intron 8 of 8) -57886 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-10 chr9 114731226 114731586 + 0.349309791294757 NA intron (NM_026036, intron 1 of 3) CpG 203 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding common_peak2_45_34_0.113570284851289_5.18606815937061_0.349309791294757-9 chr8 105292820 105293175 + 0.349309791294757 NA intron (NM_001357379, intron 5 of 12) intron (NM_001357379, intron 5 of 12) 3116 NM_001357379 277978 Mm.40228 NM_177788 ENSMUSG00000043251 Exoc3l C730015A04Rik|Exoc3l1 exocyst complex component 3-like protein-coding common_peak1_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-4 chr8 36165307 36165660 + 0.349309791294751 NA Intergenic Intergenic 9473 NR_151736 330738 Mm.128075 NR_151736 ENSMUSG00000109704 Gm38414 A230084N10|Gm45568 predicted gene, 38414 ncRNA common_peak2_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-2 chr17 88256030 88256749 + 0.349309791294751 NA Intergenic CpG 130877 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding common_peak1_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-3 chr6 134669990 134670893 + 0.349309791294751 NA intron (NM_001170479, intron 2 of 3) intron (NM_001170479, intron 2 of 3) 29501 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak2_40_38_-0.207387671688567_5.18170838301797_0.349309791294751 chr15 83142405 83142807 + 0.349309791294751 NA intron (NM_001347082, intron 1 of 7) intron (NM_001347082, intron 1 of 7) 6772 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak1_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-2 chr16 11134067 11134558 + 0.349309791294751 NA exon (NM_029582, exon 1 of 12) exon (NM_029582, exon 1 of 12) 220 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak1_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-5 chr9 105494507 105495026 + 0.349309791294751 NA intron (NM_001359822, intron 1 of 28) CpG 367 NM_175025 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding unique_peak2_40_38_-0.207387671688567_5.18170838301797_0.349309791294751 chr17 31308176 31308939 + 0.349309791294751 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 12333 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-3 chr4 116150524 116151087 + 0.349309791294751 NA promoter-TSS (NM_001290658) promoter-TSS (NM_001290658) 287 NM_026651 68273 Mm.196045 NM_026651 ENSMUSG00000028700 Pomgnt1 0610016I07Rik|4930467B06Rik protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein-coding common_peak2_40_38_-0.207387671688567_5.18170838301797_0.349309791294751-4 chr7 46033832 46034236 + 0.349309791294751 NA intron (NM_153057, intron 1 of 30) CpG 338 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak1_40_38_-0.207387671688567_5.18170838301797_0.349309791294751 chr13 5714130 5714791 + 0.349309791294751 NA Intergenic Intergenic 143632 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_94_84_-0.127625562411921_6.34557815493174_0.34929597637827 chr11 69758883 69759824 + 0.34929597637827 NA promoter-TSS (NM_001291068) promoter-TSS (NM_001291068) -720 NM_001291068 20020 Mm.16533 NM_009089 ENSMUSG00000005198 Polr2a 220kDa|Rpb1|Rpo2-1 polymerase (RNA) II (DNA directed) polypeptide A protein-coding common_peak1_102_78_0.0938066168811238_6.35068405661766_0.34929597637827 chr13 51853568 51854289 + 0.34929597637827 NA Intergenic Intergenic 7253 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_102_78_0.0938066168811238_6.35068405661766_0.34929597637827 chr7 144054466 144055182 + 0.34929597637827 NA Intergenic Intergenic 45570 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_94_84_-0.127625562411921_6.34557815493174_0.34929597637827 chr2 18694031 18694509 + 0.34929597637827 NA Intergenic CpG -4752 NM_001001334 381350 Mm.330024 NM_001001334 ENSMUSG00000037708 Spag6 Spag6l sperm associated antigen 6 protein-coding common_peak1_171_148_-0.0870359493992172_7.17565054576255_0.349291145639068 chr19 5366000 5367517 + 0.349291145639068 NA promoter-TSS (NM_027236) promoter-TSS (NM_027236) -55 NM_027236 69860 Mm.299167 NM_027236 ENSMUSG00000024841 Eif1ad 2010003J03Rik|AI131644 eukaryotic translation initiation factor 1A domain containing protein-coding common_peak2_269_230_-0.073655250908506_7.8149214159618_0.349288910482577 chr1 178336067 178338089 + 0.349288910482577 NA exon (NM_016805, exon 1 of 14) exon (NM_016805, exon 1 of 14) 737 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_138_107_0.0720895492196183_6.79093227677328_0.349183817669631 chr2 117730763 117732486 + 0.349183817669631 NA Intergenic Intergenic 81178 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_139_107_0.0823585312358475_6.79606676778139_0.349183817669631 chr3 103058274 103059385 + 0.349183817669631 NA TTS (NM_144901) TTS (NM_144901) 544 NM_010937 18176 Mm.400954 NM_010937 ENSMUSG00000027852 Nras AV095280|N-ras neuroblastoma ras oncogene protein-coding common_peak2_130_114_-0.103427742501984_6.79377617969338_0.349183817669631 chr11 19924253 19925837 + 0.349183817669631 NA intron (NM_033523, intron 1 of 5) CpG 603 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_71_54_0.103296555574801_5.83300799131206_0.349087109394252 chr2 26445644 26446388 + 0.349087109394252 NA promoter-TSS (NM_153125) promoter-TSS (NM_153125) 92 NR_152207 100125929 Mm.392411 NR_152207 0610009E02Rik - RIKEN cDNA 0610009E02 gene ncRNA common_peak2_71_54_0.103296555574801_5.83300799131206_0.349087109394252-2 chr8 18727291 18728094 + 0.349087109394252 NA intron (NM_007426, intron 1 of 8) intron (NM_007426, intron 1 of 8) 13870 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_71_54_0.103296555574801_5.83300799131206_0.349087109394252 chr8 13676694 13677409 + 0.349087109394252 NA intron (NM_009025, intron 1 of 23) CpG 536 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_71_54_0.103296555574801_5.83300799131206_0.349087109394252-3 chr9 123478752 123479510 + 0.349087109394252 NA 5' UTR (NM_013860, exon 1 of 8) 5' UTR (NM_013860, exon 1 of 8) 430 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak1_65_59_-0.146879590784004_5.83345080021652_0.34908710939424 chr17 35812456 35813031 + 0.34908710939424 NA Intergenic Intergenic -8970 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak2_65_59_-0.146879590784004_5.83345080021652_0.34908710939424 chr10 68238584 68239332 + 0.34908710939424 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 39768 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_65_59_-0.146879590784004_5.83345080021652_0.34908710939424-3 chr8 11264214 11264861 + 0.34908710939424 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -48268 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_65_59_-0.146879590784004_5.83345080021652_0.34908710939424-2 chr7 19507803 19509118 + 0.34908710939424 NA promoter-TSS (NM_177692) promoter-TSS (NM_177692) -129 NM_177692 232946 Mm.64557 NM_177692 ENSMUSG00000057667 Bloc1s3 BC043666|Blos3|E230011O18|rp biogenesis of lysosomal organelles complex-1, subunit 3 protein-coding common_peak1_65_59_-0.146879590784004_5.83345080021652_0.34908710939424-3 chr8 128358050 128358769 + 0.34908710939424 NA promoter-TSS (NM_008737) promoter-TSS (NM_008737) -664 NM_001358959 18186 Mm.271745 NM_008737 ENSMUSG00000025810 Nrp1 C530029I03|NP-1|NPN-1|Npn1|Nrp neuropilin 1 protein-coding common_peak1_65_59_-0.146879590784004_5.83345080021652_0.34908710939424-2 chr5 91109667 91110390 + 0.34908710939424 NA Intergenic Intergenic -29571 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding common_peak1_271_231_-0.0693150765108532_7.82332345687215_0.349075340533364 chr15 83171350 83173172 + 0.349075340533364 NA promoter-TSS (NM_029787) promoter-TSS (NM_029787) -53 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_182_141_0.0711895724524041_7.18534190573088_0.348958225358712 chr19 6057927 6059308 + 0.348958225358712 NA promoter-TSS (NM_026246) promoter-TSS (NM_026246) 650 NM_001190436 14109 Mm.329631 NM_007990 ENSMUSG00000038274 Fau MNSFbeta Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein-coding common_peak2_131_115_-0.105024969876302_6.80546851018942_0.348751802247908-2 chr8 71366950 71368167 + 0.348751802247908 NA intron (NM_025917, intron 1 of 7) intron (NM_025917, intron 1 of 7) 341 NM_025917 67023 Mm.41890 NM_025917 ENSMUSG00000002395 Use1 2010315L10Rik|5730403H22Rik|AV002165|D12|Ed2|Q-snare|p31 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding common_peak2_131_115_-0.105024969876302_6.80546851018942_0.348751802247908 chr2 32966377 32967764 + 0.348751802247908 NA Intergenic CpG 3769 NR_002898 104367 Mm.250030 NR_002898 ENSMUSG00000065124 Snora65 MBII-351|Rnu65 small nucleolar RNA, H/ACA box 65 snoRNA common_peak1_131_115_-0.105024969876302_6.80546851018942_0.348751802247908 chr15 102015328 102016145 + 0.348751802247908 NA Intergenic B1_Mus2|SINE|Alu -11394 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak2_140_108_0.0792576011793393_6.8078131253666_0.348751802247883 chr9 110879800 110881359 + 0.348751802247883 NA promoter-TSS (NM_146260) promoter-TSS (NM_146260) 257 NM_001146060 235633 Mm.86338 NM_146228 ENSMUSG00000044037 Als2cl 79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018 ALS2 C-terminal like protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342 chr1 82635008 82635381 + 0.348739088570342 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 48273 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-3 chr1 106629905 106630197 + 0.348739088570342 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -83420 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-16 chr9 98986499 98986825 + 0.348739088570342 NA intron (NM_011810, intron 1 of 4) CpG 289 NM_001122851 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342 chr10 19464748 19464990 + 0.348739088570342 NA Intergenic Intergenic -21846 NR_152784 102635880 Mm.331974 NR_152784 ENSMUSG00000110902 Gm33104 - predicted gene, 33104 ncRNA common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-10 chr5 148341862 148342323 + 0.348739088570342 NA exon (NM_001301424, exon 7 of 13) exon (NM_001301424, exon 7 of 13) 50723 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-4 chr13 113270529 113270828 + 0.348739088570342 NA Intergenic Intergenic 61019 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-7 chr19 4112721 4113011 + 0.348739088570342 NA TTS (NM_001276284) TTS (NM_001276284) 8709 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding unique_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-3 chr3 144153142 144153576 + 0.348739088570342 NA Intergenic Intergenic 48973 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-3 chr10 97063014 97063403 + 0.348739088570342 NA Intergenic Intergenic 27440 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-14 chr5 92763118 92763439 + 0.348739088570342 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 25284 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-2 chr1 88361416 88362080 + 0.348739088570342 NA intron (NM_134252, intron 20 of 26) intron (NM_134252, intron 20 of 26) -45262 NM_029269 75396 Mm.173058 NM_029269 ENSMUSG00000026295 Spp2 0610038O04Rik|pp-24|spp24 secreted phosphoprotein 2 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-17 chr9 121760136 121760361 + 0.348739088570342 NA promoter-TSS (NR_033503) promoter-TSS (NR_033503) 215 NM_001166644 270210 Mm.473702 NM_001166644 ENSMUSG00000013419 Zfp651 4732420M22Rik|BC030045|R74626 zinc finger protein 651 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-9 chr5 125386152 125386903 + 0.348739088570342 NA exon (NM_019639, exon 2 of 2) exon (NM_019639, exon 2 of 2) 3490 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-20 chr7 45457934 45458190 + 0.348739088570342 NA 3' UTR (NM_010240, exon 4 of 4) 3' UTR (NM_010240, exon 4 of 4) 1824 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding unique_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-4 chr7 68148256 68148814 + 0.348739088570342 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 115698 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding unique_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-3 chr2 73606638 73607045 + 0.348739088570342 NA intron (NR_040623, intron 1 of 3) intron (NR_040623, intron 1 of 3) 10315 NR_040623 329427 Mm.491618 NR_040623 ENSMUSG00000086544 Chn1os3 Gm13704 chimerin 1, opposite strand 3 ncRNA common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-15 chr5 115631372 115631654 + 0.348739088570342 NA promoter-TSS (NM_198163) promoter-TSS (NM_198163) 303 NR_027810 66123 Mm.133063 NM_021417 ENSMUSG00000107121 1110006O24Rik - RIKEN cDNA 1110006O24 gene ncRNA common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-2 chr10 69916489 69916747 + 0.348739088570342 NA intron (NM_170689, intron 23 of 41) intron (NM_170689, intron 23 of 41) -8914 NM_170687 11735 Mm.235960 NM_009670 ENSMUSG00000069601 Ank3 2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G ankyrin 3, epithelial protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342 chr10 115383807 115384227 + 0.348739088570342 NA promoter-TSS (NM_001033261) promoter-TSS (NM_001033261) 418 NM_025780 66816 Mm.32314 NM_025780 ENSMUSG00000020137 Thap2 2900040O07Rik|9030625G08Rik|AI450385|AI649097 THAP domain containing, apoptosis associated protein 2 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-14 chr9 22116786 22117028 + 0.348739088570342 NA 5' UTR (NM_001357309, exon 1 of 3) 5' UTR (NM_001357309, exon 1 of 3) 288 NM_001357311 66126 Mm.29801 NM_170777 ENSMUSG00000013822 Elof1 1110011K10Rik ELF1 homolog, elongation factor 1 protein-coding unique_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342 chr13 49320139 49320565 + 0.348739088570342 NA Intergenic Intergenic -11144 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-9 chr16 30885118 30885493 + 0.348739088570342 NA Intergenic Intergenic 196127 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-11 chr2 32885225 32885598 + 0.348739088570342 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 9277 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-3 chr11 59191516 59191765 + 0.348739088570342 NA intron (NM_008193, intron 1 of 7) CpG 312 NM_008193 14923 Mm.3624 NM_008193 ENSMUSG00000020444 Guk1 AA409738|AL033299|AL033300|AV026611|Gmk|Guk-1 guanylate kinase 1 protein-coding unique_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342 chr12 86835022 86835616 + 0.348739088570342 NA Intergenic PB1D10|SINE|Alu 49495 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-16 chr5 121849093 121849351 + 0.348739088570342 NA intron (NM_001359950, intron 1 of 2) CpG 225 NM_001359949 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding unique_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-2 chr8 69394254 69394611 + 0.348739088570342 NA TTS (NR_038044) TTS (NR_038044) 1112 NR_038044 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|Gm10311 predicted gene 10033 ncRNA common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-7 chr2 31973937 31974214 + 0.348739088570342 NA promoter-TSS (NM_172268) promoter-TSS (NM_172268) -375 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-4 chr13 64002858 64003133 + 0.348739088570342 NA Intergenic Intergenic 86206 NM_008291 15487 Mm.5109 NM_008291 ENSMUSG00000033122 Hsd17b3 - hydroxysteroid (17-beta) dehydrogenase 3 protein-coding unique_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-6 chr8 19980341 19980686 + 0.348739088570342 NA intron (NM_001270553, intron 6 of 9) CpG 250937 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-15 chr9 58454346 58454732 + 0.348739088570342 NA promoter-TSS (NR_040736) promoter-TSS (NR_040736) -634 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-11 chr7 12977366 12977674 + 0.348739088570342 NA promoter-TSS (NM_001168561) promoter-TSS (NM_001168561) -328 NM_175558 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-8 chr15 27630959 27631184 + 0.348739088570342 NA promoter-TSS (NM_001013792) promoter-TSS (NM_001013792) -378 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-17 chr5 140331769 140332173 + 0.348739088570342 NA promoter-TSS (NM_026510) promoter-TSS (NM_026510) 15 NM_001356584 17766 Mm.118846 NM_008637 ENSMUSG00000036639 Nudt1 Mth1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-12 chr6 99439202 99439436 + 0.348739088570342 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -3974 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-3 chr11 106193805 106194133 + 0.348739088570342 NA promoter-TSS (NM_028126) promoter-TSS (NM_028126) -366 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-5 chr13 74349832 74350128 + 0.348739088570342 NA promoter-TSS (NM_001168659) promoter-TSS (NM_001168659) 260 NM_023281 66945 Mm.158231 NM_023281 ENSMUSG00000021577 Sdha 1500032O14Rik|2310034D06Rik|4921513A11|C81073|FP|SDH2|SDHF succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-10 chr6 31075323 31075703 + 0.348739088570342 NA Intergenic Intergenic -12420 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA unique_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342 chr19 58523543 58523885 + 0.348739088570342 NA intron (NM_029372, intron 3 of 8) intron (NM_029372, intron 3 of 8) 11712 NM_029372 75645 Mm.159542 NM_029372 ENSMUSG00000025090 Ccdc172 1700011F14Rik coiled-coil domain containing 172 protein-coding unique_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-5 chr7 80786417 80786746 + 0.348739088570342 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 16750 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-21 chr8 31402275 31402537 + 0.348739088570342 NA Intergenic Intergenic 34657 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-18 chr7 4740155 4740460 + 0.348739088570342 NA 5' UTR (NM_001358044, exon 1 of 9) 5' UTR (NM_001358044, exon 1 of 9) 180 NM_001358044 232811 Mm.247844 NM_146177 ENSMUSG00000059851 Kmt5c BC024816|Suv4-20h2|Suv420h2 lysine methyltransferase 5C protein-coding common_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-2 chr10 25273261 25273775 + 0.348739088570342 NA intron (NM_018747, intron 3 of 7) intron (NM_018747, intron 3 of 7) 25645 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-10 chr17 83862061 83862394 + 0.348739088570342 NA Intergenic Intergenic -7809 NR_155491 320021 Mm.379475 NR_155490 C430042M11Rik - RIKEN cDNA C430042M11 gene ncRNA common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-5 chr15 101411039 101411411 + 0.348739088570342 NA Intergenic Intergenic -1178 NM_033073 110310 Mm.486285 NM_033073 ENSMUSG00000023039 Krt7 D15Wsu77e|K7|Krt2-7 keratin 7 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-4 chr11 20333059 20333530 + 0.348739088570342 NA promoter-TSS (NM_018861) promoter-TSS (NM_018861) -581 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding common_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-5 chr2 60539133 60539578 + 0.348739088570342 NA intron (NM_008867, intron 1 of 29) intron (NM_008867, intron 1 of 29) 13953 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342 chr10 7955782 7956078 + 0.348739088570342 NA 5' UTR (NM_138667, exon 1 of 7) 5' UTR (NM_138667, exon 1 of 7) 193 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-13 chr7 81523146 81523366 + 0.348739088570342 NA promoter-TSS (NR_045299) promoter-TSS (NR_045299) -294 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-19 chr7 12422252 12422656 + 0.348739088570342 NA promoter-TSS (NM_001033820) promoter-TSS (NM_001033820) 37 NM_001033820 619331 Mm.361832 NM_001033820 ENSMUSG00000034071 Zfp551 9630004E07Rik|Znf551 zinc fingr protein 551 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-8 chr4 65289775 65290166 + 0.348739088570342 NA intron (NM_021362, intron 10 of 21) intron (NM_021362, intron 10 of 21) 165796 NM_021362 18491 Mm.317854 NM_021362 ENSMUSG00000028370 Pappa 8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A pregnancy-associated plasma protein A protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-7 chr14 122912741 122913293 + 0.348739088570342 NA promoter-TSS (NR_155287) promoter-TSS (NR_155287) -13 NR_155287 105245866 Mm.390754 NM_001039531 ENSMUSG00000075463 Gm15735 4930594M22Rik|F930011C10Rik predicted gene 15735 ncRNA common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-13 chr7 49602990 49603405 + 0.348739088570342 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 33638 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-9 chr5 32745474 32745824 + 0.348739088570342 NA 5' UTR (NM_001347332, exon 2 of 9) 5' UTR (NM_001347332, exon 2 of 9) 693 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding unique_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-4 chr4 141605546 141605860 + 0.348739088570342 NA intron (NM_133754, intron 1 of 8) intron (NM_133754, intron 1 of 8) 349 NM_133754 74202 Mm.490327 NM_133754 ENSMUSG00000006219 Fblim1 2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s) filamin binding LIM protein 1 protein-coding common_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-4 chr12 109417357 109417709 + 0.348739088570342 NA Intergenic Intergenic -35290 NR_033813 13386 Mm.157069 NM_010052 ENSMUSG00000040856 Dlk1 AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1 delta like non-canonical Notch ligand 1 protein-coding unique_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342 chr1 9797608 9798025 + 0.348739088570342 NA promoter-TSS (NM_177547) promoter-TSS (NM_177547) -314 NM_133220 170755 Mm.336410 NM_133220 ENSMUSG00000025915 Sgk3 2510015P22Rik|A330005P07Rik|Cisk|fy|fz serum/glucocorticoid regulated kinase 3 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-6 chr17 12915452 12915825 + 0.348739088570342 NA promoter-TSS (NM_013686) promoter-TSS (NM_013686) 453 NM_026310 67681 Mm.290166 NM_026310 ENSMUSG00000057388 Mrpl18 1010001C05Rik|C79879|HSPC071|MRP-L18 mitochondrial ribosomal protein L18 protein-coding unique_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-5 chr5 32034825 32035384 + 0.348739088570342 NA intron (NM_144541, intron 10 of 11) intron (NM_144541, intron 10 of 11) -101368 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-6 chr16 30187680 30187901 + 0.348739088570342 NA Intergenic Intergenic 79742 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-14 chr8 67280328 67280658 + 0.348739088570342 NA Intergenic Intergenic -210265 NM_008673 17960 Mm.14125 NM_008673 ENSMUSG00000025588 Nat1 Nat-1 N-acetyl transferase 1 protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-12 chr7 19096124 19096643 + 0.348739088570342 NA exon (NM_011383, exon 2 of 3) exon (NM_011383, exon 2 of 3) 1839 NM_011383 20475 Mm.3410 NM_011383 ENSMUSG00000040841 Six5 Dmahp|MDMAHP|TrexBF sine oculis-related homeobox 5 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-6 chr14 54427038 54427277 + 0.348739088570342 NA intron (NM_026851, intron 2 of 4) intron (NM_026851, intron 2 of 4) 248 NM_026851 68836 Mm.248163 NM_026851 ENSMUSG00000010406 Mrpl52 1110047B07Rik mitochondrial ribosomal protein L52 protein-coding unique_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-2 chr14 51932167 51932579 + 0.348739088570342 NA Intergenic Intergenic -9600 NM_001011687 497071 Mm.378602 NM_001011687 ENSMUSG00000068392 Rnase13 - ribonuclease, RNase A family, 13 (non-active) protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-11 chr6 50420398 50420742 + 0.348739088570342 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 35600 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-2 chr10 116220662 116221182 + 0.348739088570342 NA intron (NM_001358484, intron 5 of 12) intron (NM_001358484, intron 5 of 12) 43571 NM_001161840 19279 Mm.336316 NM_011217 ENSMUSG00000020151 Ptprr Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213 protein tyrosine phosphatase, receptor type, R protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-5 chr14 20765750 20766002 + 0.348739088570342 NA intron (NM_001039139, intron 7 of 18) intron (NM_001039139, intron 7 of 18) 28212 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding unique_peak1_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-2 chr9 94538817 94539157 + 0.348739088570342 NA promoter-TSS (NM_001033145) promoter-TSS (NM_001033145) -906 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-13 chr5 5380306 5380560 + 0.348739088570342 NA promoter-TSS (NM_011074) promoter-TSS (NM_011074) -182 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-22 chrX 73478053 73478480 + 0.348739088570342 NA Intergenic Intergenic -5335 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak1_26_19_0.15767373558604_4.40076496268038_0.348739088570342-8 chr3 132949780 132950208 + 0.348739088570342 NA promoter-TSS (NM_001287103) promoter-TSS (NM_001287103) -180 NM_001287103 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding common_peak2_26_19_0.15767373558604_4.40076496268038_0.348739088570342-12 chr3 79884445 79884753 + 0.348739088570342 NA Intergenic Intergenic -1331 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak2_22_22_-0.273653674687514_4.38673511871326_0.348739088570342-2 chr13 17805610 17805945 + 0.348739088570342 NA promoter-TSS (NM_001081058) promoter-TSS (NM_001081058) -680 NM_027118 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding common_peak2_95_85_-0.129499067403335_6.36151522100043_0.348707102394169-2 chr19 43752336 43753377 + 0.348707102394169 NA promoter-TSS (NM_025530) promoter-TSS (NM_025530) 144 NM_144874 226139 Mm.248237 NM_144874 ENSMUSG00000040018 Cox15 2900026G05Rik cytochrome c oxidase assembly protein 15 protein-coding common_peak1_95_85_-0.129499067403335_6.36151522100043_0.348707102394169 chr4 107468583 107469684 + 0.348707102394169 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 34414 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_103_79_0.0895001204212615_6.36667815509799_0.348707102394169-2 chr8 85024674 85025535 + 0.348707102394169 NA intron (NM_019652, intron 1 of 6) intron (NM_019652, intron 1 of 6) 183 NM_001357203 56495 Mm.41475 NM_019652 ENSMUSG00000052456 Asna1 1810048H22Rik|ArsA arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) protein-coding common_peak1_103_79_0.0895001204212615_6.36667815509799_0.348707102394169 chr2 180233468 180234620 + 0.348707102394169 NA Intergenic B2_Mm2|SINE|B2 -8185 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_96_85_-0.11465420029102_6.36893765455659_0.348707102394169 chr12 8674357 8675324 + 0.348707102394169 NA intron (NM_030723, intron 1 of 20) CpG 159 NM_030723 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_95_85_-0.129499067403335_6.36151522100043_0.348707102394169 chr13 101766524 101768099 + 0.348707102394169 NA intron (NM_001077495, intron 1 of 15) CpG 906 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak2_103_79_0.0895001204212615_6.36667815509799_0.348707102394169 chr1 181015468 181016442 + 0.348707102394169 NA intron (NM_010145, intron 1 of 8) intron (NM_010145, intron 1 of 8) 1614 NM_001312918 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding common_peak2_231_180_0.060957175147573_7.53032447465699_0.34870119031816 chr3 8992135 8994685 + 0.34870119031816 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 10794 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak2_483_379_0.0443451934988897_8.59202820508039_0.348630025224188 chr7 16399243 16402723 + 0.348630025224188 NA promoter-TSS (NM_198631) promoter-TSS (NM_198631) -213 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_173_150_-0.0897110952936009_7.19354919167828_0.348629867354518 chr13 58214593 58216430 + 0.348629867354518 NA 5' UTR (NM_152234, exon 1 of 10) 5' UTR (NM_152234, exon 1 of 10) 142 NM_152234 56085 Mm.182053 NM_026842 ENSMUSG00000005312 Ubqln1 1110046H03Rik|1810030E05Rik|AU019746|C77538|D13Ertd372e|Da41|Dsk2|Plic-1|Plic1|Xdrp1 ubiquilin 1 protein-coding common_peak1_173_150_-0.0897110952936009_7.19354919167828_0.348629867354518-2 chr18 35118330 35119923 + 0.348629867354518 NA intron (NM_009818, intron 1 of 17) CpG 214 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_484_380_0.0435103065251479_8.5954023407559_0.348506856986691 chr6 31080219 31083713 + 0.348506856986691 NA Intergenic Intergenic -18873 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_141_109_0.0762060486088281_6.81946273782907_0.34832747085371 chr17 86962732 86963836 + 0.34832747085371 NA 5' UTR (NM_145491, exon 1 of 5) 5' UTR (NM_145491, exon 1 of 5) 173 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_132_116_-0.106597195037372_6.81706612206472_0.34832747085371 chr11 62819909 62821425 + 0.34832747085371 NA exon (NM_053169, exon 1 of 6) exon (NM_053169, exon 1 of 6) 414 NM_053169 94092 Mm.117087 NM_053169 ENSMUSG00000047821 Trim16 9130006M08Rik|AI482483|EBBP tripartite motif-containing 16 protein-coding common_peak2_141_109_0.0762060486088281_6.81946273782907_0.34832747085371-2 chr2 158144671 158146495 + 0.34832747085371 NA intron (NM_009373, intron 1 of 12) intron (NM_009373, intron 1 of 12) 809 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_132_116_-0.106597195037372_6.81706612206472_0.34832747085371 chr19 5488580 5489661 + 0.34832747085371 NA promoter-TSS (NR_153768) promoter-TSS (NR_153768) -741 NR_153769 71711 Mm.27697 NM_027877 ENSMUSG00000024906 Mus81 1200008A18Rik|AI182501|AW045863 MUS81 structure-specific endonuclease subunit protein-coding common_peak1_184_143_0.0665826792225195_7.20321634105357_0.348305978472577 chr11 53299163 53300421 + 0.348305978472577 NA intron (NM_008300, intron 1 of 18) CpG 687 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak1_184_143_0.0665826792225195_7.20321634105357_0.348305978472577-2 chr6 135065752 135067551 + 0.348305978472577 NA intron (NM_181444, intron 1 of 3) B1F|SINE|Alu 989 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak2_66_60_-0.149184319922499_5.85614517760164_0.348250801558508-4 chr8 124949505 124950159 + 0.348250801558508 NA promoter-TSS (NM_053207) promoter-TSS (NM_053207) -578 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_66_60_-0.149184319922499_5.85614517760164_0.348250801558508-2 chr18 31608986 31609921 + 0.348250801558508 NA intron (NM_001357461, intron 1 of 7) CpG 477 NM_026165 67453 Mm.23896 NM_026165 ENSMUSG00000024259 Slc25a46 1200007B05Rik|AI325987 solute carrier family 25, member 46 protein-coding common_peak1_66_60_-0.149184319922499_5.85614517760164_0.348250801558508 chr10 127063680 127064491 + 0.348250801558508 NA intron (NM_001355005, intron 1 of 6) intron (NM_001355005, intron 1 of 6) 550 NM_001355005 12567 Mm.6839 NM_009870 ENSMUSG00000006728 Cdk4 Crk3 cyclin-dependent kinase 4 protein-coding common_peak1_66_60_-0.149184319922499_5.85614517760164_0.348250801558508-3 chr9 96719123 96720144 + 0.348250801558508 NA promoter-TSS (NM_001359960) promoter-TSS (NM_001359960) -188 NM_001359960 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_66_60_-0.149184319922499_5.85614517760164_0.348250801558508 chr16 23306405 23307524 + 0.348250801558508 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 16494 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_66_60_-0.149184319922499_5.85614517760164_0.348250801558508-3 chr18 82522876 82523700 + 0.348250801558508 NA intron (NM_001025245, intron 3 of 3) intron (NM_001025245, intron 3 of 3) -31175 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_66_60_-0.149184319922499_5.85614517760164_0.348250801558508-2 chr3 130950808 130951468 + 0.348250801558508 NA Intergenic MIRc|SINE|MIR -159159 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_66_60_-0.149184319922499_5.85614517760164_0.348250801558508-5 chr9 96363866 96364295 + 0.348250801558508 NA promoter-TSS (NM_001357213) promoter-TSS (NM_001357213) 351 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_72_55_0.0970605135083229_5.85588517881177_0.348250801558495 chr1 81743695 81744605 + 0.348250801558495 NA Intergenic Intergenic -387766 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA common_peak2_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-4 chr17 5821928 5822504 + 0.348250801558495 NA Intergenic B4A|SINE|B4 -19164 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak2_72_55_0.0970605135083229_5.85588517881177_0.348250801558495 chr1 82316669 82317382 + 0.348250801558495 NA intron (NM_029777, intron 1 of 6) intron (NM_029777, intron 1 of 6) 446 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak1_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-5 chr3 31016385 31016874 + 0.348250801558495 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 20858 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak1_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-2 chr1 135821139 135821772 + 0.348250801558495 NA intron (NM_133664, intron 1 of 9) intron (NM_133664, intron 1 of 9) 2857 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding common_peak2_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-3 chr15 10664940 10665862 + 0.348250801558495 NA intron (NM_001356534, intron 2 of 16) MIRb|SINE|MIR 48139 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-3 chr12 84773306 84774074 + 0.348250801558495 NA promoter-TSS (NM_023409) promoter-TSS (NM_023409) 420 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding common_peak2_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-5 chr7 28267914 28268737 + 0.348250801558495 NA exon (NM_198425, exon 1 of 1) exon (NM_198425, exon 1 of 1) 444 NM_198425 386655 Mm.258201 NM_198425 ENSMUSG00000046058 Eid2 Cri2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding common_peak1_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-4 chr19 21882388 21883231 + 0.348250801558495 NA Intergenic Intergenic 104469 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-6 chr5 134439537 134440239 + 0.348250801558495 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 16374 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak2_72_55_0.0970605135083229_5.85588517881177_0.348250801558495-2 chr10 93423116 93424278 + 0.348250801558495 NA Intergenic Intergenic -9410 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA common_peak1_234_182_0.0635084046254013_7.54745404059674_0.348189871288004 chr8 85554150 85555939 + 0.348189871288004 NA intron (NM_019794, intron 1 of 8) CpG 227 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak2_223_191_-0.0744283456489638_7.54774832789667_0.348189871288004 chr7 100929908 100932595 + 0.348189871288004 NA exon (NM_001081116, exon 1 of 21) exon (NM_001081116, exon 1 of 21) 910 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak2_222_191_-0.0808378277369393_7.54454358685269_0.348189871288004 chr18 60774300 60776248 + 0.348189871288004 NA intron (NM_020600, intron 1 of 4) intron (NM_020600, intron 1 of 4) 678 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak2_104_80_0.0852866123153904_6.38249330904232_0.348132427537962-3 chr8 121898344 121898977 + 0.348132427537962 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 9026 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak2_104_80_0.0852866123153904_6.38249330904232_0.348132427537962-2 chr15 83122382 83122907 + 0.348132427537962 NA intron (NM_001358061, intron 1 of 3) CpG 157 NM_001358061 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding common_peak2_104_80_0.0852866123153904_6.38249330904232_0.348132427537962 chr10 81320949 81322198 + 0.348132427537962 NA intron (NM_027381, intron 1 of 8) intron (NM_027381, intron 1 of 8) 470 NM_027381 70312 Mm.87628 NM_027381 ENSMUSG00000034889 Cactin 2510012J08Rik cactin, spliceosome C complex subunit protein-coding common_peak1_97_86_-0.116640332055917_6.38462332982077_0.348132427537962 chr1 43445503 43446721 + 0.348132427537962 NA intron (NM_010879, intron 1 of 4) CpG 361 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_336_285_-0.0642444683015988_8.12774910262759_0.348036278530688 chr15 38933218 38935919 + 0.348036278530688 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 659 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_337_285_-0.0599999708056913_8.12987135137554_0.348036278530688 chr10 43578248 43581339 + 0.348036278530688 NA intron (NM_009846, intron 1 of 1) intron (NM_009846, intron 1 of 1) 624 NM_009846 12484 Mm.29742 NM_009846 ENSMUSG00000047139 Cd24a Cd24|HSA|Ly-52|nectadrin CD24a antigen protein-coding common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-4 chr4 57567453 57568000 + 0.348003640999435 NA promoter-TSS (NM_172868) promoter-TSS (NM_172868) -522 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding common_peak2_42_39_-0.175685564677931_5.2340853125484_0.348003640999435 chr10 77130898 77131663 + 0.348003640999435 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -17575 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-6 chr7 49808545 49809050 + 0.348003640999435 NA intron (NM_133740, intron 10 of 15) intron (NM_133740, intron 10 of 15) 30439 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435 chr10 80261155 80261682 + 0.348003640999435 NA promoter-TSS (NM_001347119) promoter-TSS (NM_001347119) -406 NM_010255 14431 Mm.7329 NM_010255 ENSMUSG00000020150 Gamt AA571402|Spintz1 guanidinoacetate methyltransferase protein-coding common_peak2_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-3 chr12 59011252 59011950 + 0.348003640999435 NA intron (NM_009147, intron 1 of 19) intron (NM_009147, intron 1 of 19) 416 NM_009147 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-6 chr6 99028489 99028942 + 0.348003640999435 NA promoter-TSS (NM_001197322) promoter-TSS (NM_001197322) -417 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_41_39_-0.209393398867983_5.21723139545337_0.348003640999435 chr11 5761874 5762388 + 0.348003640999435 NA promoter-TSS (NR_015577) promoter-TSS (NR_015577) -19 NR_015577 76508 Mm.260203 NR_015577 ENSMUSG00000083844 Ube2d-ps 1600028I17Rik|2210015D19Rik|AI596465 ubiquitin-conjugating enzyme E2D, pseudogene ncRNA common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-7 chr6 100670698 100671089 + 0.348003640999435 NA intron (NM_181590, intron 1 of 10) CpG 264 NM_181590 72171 Mm.256022 NM_181590 ENSMUSG00000035378 Shq1 2810403P18Rik|Grim-1 SHQ1 homolog (S. cerevisiae) protein-coding common_peak2_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-6 chr5 100622432 100622745 + 0.348003640999435 NA Intergenic Intergenic -50383 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-7 chr9 63743408 63743806 + 0.348003640999435 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 14387 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-4 chr17 48410246 48410817 + 0.348003640999435 NA promoter-TSS (NM_001357904) promoter-TSS (NM_001357904) 81 NM_001357904 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-5 chr2 32571030 32571588 + 0.348003640999435 NA intron (NM_010073, intron 2 of 3) intron (NM_010073, intron 2 of 3) 451 NM_010073 13481 Mm.22001 NM_010073 ENSMUSG00000026810 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 protein-coding common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-3 chr11 86581843 86582144 + 0.348003640999435 NA Intergenic Intergenic 2165 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-4 chr8 126686066 126686617 + 0.348003640999435 NA Intergenic Intergenic -92905 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-4 chr17 78936498 78936990 + 0.348003640999435 NA promoter-TSS (NM_028611) promoter-TSS (NM_028611) 326 NM_001024806 12607 Mm.24169 NM_009882 ENSMUSG00000024081 Cebpz AI848081|CBF2|Cbf|Cebpa-rs1 CCAAT/enhancer binding protein zeta protein-coding common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-2 chr13 55535937 55536399 + 0.348003640999435 NA intron (NM_134059, intron 2 of 16) intron (NM_134059, intron 2 of 16) 490 NM_134059 72935 Mm.205045 NM_134059 ENSMUSG00000021494 Ddx41 2900024F02Rik|AA958953|ABS|AI324246 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 protein-coding common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435 chr10 91240899 91241404 + 0.348003640999435 NA Intergenic Intergenic -20532 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-3 chr7 99323030 99323488 + 0.348003640999435 NA intron (NM_010837, intron 3 of 3) intron (NM_010837, intron 3 of 3) 29980 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-5 chr4 124708213 124709082 + 0.348003640999435 NA TTS (NM_010213) TTS (NM_010213) -6214 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding common_peak2_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-2 chr12 3426077 3426676 + 0.348003640999435 NA promoter-TSS (NM_172421) promoter-TSS (NM_172421) 371 NR_030694 100043040 Mm.415417 NR_030694 ENSMUSG00000071456 1110002L01Rik - RIKEN cDNA 1110002L01 gene ncRNA common_peak1_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-3 chr15 11835239 11835669 + 0.348003640999435 NA Intergenic Intergenic 70220 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_42_39_-0.175685564677931_5.2340853125484_0.348003640999435-2 chr15 102257051 102257530 + 0.348003640999435 NA 5' UTR (NM_011244, exon 1 of 10) 5' UTR (NM_011244, exon 1 of 10) 232 NM_011244 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-2 chr10 97093390 97093829 + 0.348003640999435 NA Intergenic Intergenic 57841 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_41_39_-0.209393398867983_5.21723139545337_0.348003640999435-5 chr18 10325221 10325819 + 0.348003640999435 NA intron (NM_001083628, intron 1 of 32) CpG 341 NM_001083628 381157 Mm.261535 NM_001083628 ENSMUSG00000042942 Greb1l mKIAA4095 growth regulation by estrogen in breast cancer-like protein-coding common_peak1_46_35_0.103736301859742_5.22179315237218_0.348003640999429 chr1 87181207 87181823 + 0.348003640999429 NA Intergenic Intergenic -1799 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding common_peak1_46_35_0.103736301859742_5.22179315237218_0.348003640999429-3 chr16 23306898 23307469 + 0.348003640999429 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 16713 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_46_35_0.103736301859742_5.22179315237218_0.348003640999429 chr11 87986695 87987311 + 0.348003640999429 NA promoter-TSS (NM_001168472) promoter-TSS (NM_001168472) -418 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak1_46_35_0.103736301859742_5.22179315237218_0.348003640999429-4 chr6 112210907 112211713 + 0.348003640999429 NA intron (NR_027865, intron 1 of 2) intron (NR_027865, intron 1 of 2) 602 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA common_peak2_46_35_0.103736301859742_5.22179315237218_0.348003640999429-5 chr8 27261996 27262392 + 0.348003640999429 NA intron (NM_007918, intron 1 of 2) intron (NM_007918, intron 1 of 2) 1867 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak1_46_35_0.103736301859742_5.22179315237218_0.348003640999429-2 chr1 93803898 93804230 + 0.348003640999429 NA promoter-TSS (NM_025454) promoter-TSS (NM_025454) 99 NM_025454 66262 Mm.64065 NM_025454 ENSMUSG00000026283 Ing5 1700001C14Rik|1700027H23Rik|1810018M11Rik|AI225768 inhibitor of growth family, member 5 protein-coding common_peak2_46_35_0.103736301859742_5.22179315237218_0.348003640999429-3 chr2 3713590 3714117 + 0.348003640999429 NA intron (NM_025626, intron 1 of 3) GC_rich|Low_complexity|Low_complexity 395 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_46_35_0.103736301859742_5.22179315237218_0.348003640999429-2 chr14 76414986 76415472 + 0.348003640999429 NA promoter-TSS (NM_207652) promoter-TSS (NM_207652) 268 NM_001310646 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_46_35_0.103736301859742_5.22179315237218_0.348003640999429-5 chr7 67222614 67223106 + 0.348003640999429 NA promoter-TSS (NR_131044) promoter-TSS (NR_131044) 244 NM_001191051 75099 Mm.121691 NM_175215 ENSMUSG00000043831 Lysmd4 4930506D23Rik LysM, putative peptidoglycan-binding, domain containing 4 protein-coding common_peak2_46_35_0.103736301859742_5.22179315237218_0.348003640999429-4 chr5 129725199 129725679 + 0.348003640999429 NA intron (NM_008095, intron 1 of 9) CpG 364 NM_008095 14467 Mm.12468 NM_008095 ENSMUSG00000029432 Nipsnap2 AV006093|Gbas nipsnap homolog 2 protein-coding common_peak2_175_152_-0.0923223992420796_7.21122664307161_0.347986468078005 chr15 82046100 82047807 + 0.347986468078005 NA intron (NM_011482, intron 1 of 2) B1_Mur1|SINE|Alu 645 NM_011482 20826 Mm.299312 NM_011482 ENSMUSG00000063480 Snu13 FA-1|Fta1|Nhp2l1|Ssfa1 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) protein-coding common_peak1_176_152_-0.084206134715763_7.21528477533477_0.347986468078005 chr19 45074572 45075674 + 0.347986468078005 NA promoter-TSS (NM_001362398) promoter-TSS (NM_001362398) -118 NM_001362398 107250 Mm.24417 NM_178929 ENSMUSG00000025213 Kazald1 AI842353|Bono1|IGFBP-rP10 Kazal-type serine peptidase inhibitor domain 1 protein-coding common_peak1_235_183_0.061729170119178_7.5544265411166_0.347938303512435 chr10 120977542 120979876 + 0.347938303512435 NA exon (NM_001081193, exon 1 of 13) exon (NM_001081193, exon 1 of 13) 621 NM_001081193 380664 Mm.339371 NM_001081193 ENSMUSG00000048661 Lemd3 AI316861|Man1 LEM domain containing 3 protein-coding common_peak2_224_192_-0.0755419502341068_7.55468606215103_0.347938303512435 chr15 97837323 97839540 + 0.347938303512435 NA intron (NM_001204280, intron 1 of 21) MIR3|SINE|MIR 6071 NM_001204279 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_225_193_-0.076645120100121_7.56159028213707_0.347689405655985 chr7 66366187 66368130 + 0.347689405655985 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 14566 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_177_153_-0.0855342938682178_7.22401939376079_0.347671247970197 chr11 84067657 84069631 + 0.347671247970197 NA promoter-TSS (NM_019819) promoter-TSS (NM_019819) -287 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak1_98_87_-0.118585011585329_6.40013911284463_0.347571444258301 chr4 54946158 54947702 + 0.347571444258301 NA Intergenic Intergenic -1015 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding common_peak2_105_81_0.0811630710785325_6.39813354015735_0.347571444258301-2 chr4 86575718 86576904 + 0.347571444258301 NA exon (NM_178376, exon 1 of 1) exon (NM_178376, exon 1 of 1) 638 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding common_peak1_105_81_0.0811630710785325_6.39813354015735_0.347571444258301 chr12 71136212 71137184 + 0.347571444258301 NA promoter-TSS (NM_029818) promoter-TSS (NM_029818) -23 NM_001024854 30056 Mm.207767 NM_013896 ENSMUSG00000021079 Timm9 2810011L15Rik|Tim10a|Timm10 translocase of inner mitochondrial membrane 9 protein-coding common_peak2_105_81_0.0811630710785325_6.39813354015735_0.347571444258301 chr19 4962066 4962697 + 0.347571444258301 NA promoter-TSS (NM_025553) promoter-TSS (NM_025553) 75 NM_025553 66419 Mm.28494 NM_025553 ENSMUSG00000024902 Mrpl11 2410001P07Rik|L11mt mitochondrial ribosomal protein L11 protein-coding common_peak1_105_81_0.0811630710785325_6.39813354015735_0.347571444258301-3 chr18 65738912 65740355 + 0.347571444258301 NA intron (NM_177028, intron 9 of 14) intron (NM_177028, intron 9 of 14) 41365 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak2_105_81_0.0811630710785325_6.39813354015735_0.347571444258301-3 chr7 28350762 28351471 + 0.347571444258301 NA promoter-TSS (NR_028129) promoter-TSS (NR_028129) -424 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak1_105_81_0.0811630710785325_6.39813354015735_0.347571444258301-2 chr17 45772904 45774326 + 0.347571444258301 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 39109 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_143_111_0.0702463674686129_6.84247810579191_0.347501054323148 chr11 3894436 3895767 + 0.347501054323148 NA promoter-TSS (NM_026150) promoter-TSS (NM_026150) 25 NM_026150 67430 Mm.347950 NM_026150 ENSMUSG00000020434 4921536K21Rik AV043724 RIKEN cDNA 4921536K21 gene protein-coding common_peak1_67_61_-0.151420432623667_5.87848609407504_0.347443112052886 chr13 69611826 69612311 + 0.347443112052886 NA promoter-TSS (NM_145354) promoter-TSS (NM_145354) 52 NM_145354 28114 Mm.260009 NM_145354 ENSMUSG00000021595 Nsun2 D13Wsu123e|Misu NOL1/NOP2/Sun domain family member 2 protein-coding common_peak1_67_61_-0.151420432623667_5.87848609407504_0.347443112052886-2 chr16 11202502 11203283 + 0.347443112052886 NA promoter-TSS (NR_038156) promoter-TSS (NR_038156) 400 NM_025546 66409 Mm.28291 NM_025546 ENSMUSG00000005846 Rsl1d1 2410005K20Rik|C76439|pBK1 ribosomal L1 domain containing 1 protein-coding common_peak2_67_61_-0.151420432623667_5.87848609407504_0.347443112052886 chr12 87443072 87443776 + 0.347443112052886 NA promoter-TSS (NM_026958) promoter-TSS (NM_026958) 415 NM_001102565 211064 Mm.486235 NM_001102565 ENSMUSG00000079036 Alkbh1 2700073G19Rik|Abh|Alkbh|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding common_peak2_73_56_0.0910157473194566_5.87839788782447_0.347443112052874 chr19 47865205 47865666 + 0.347443112052874 NA promoter-TSS (NM_026619) promoter-TSS (NM_026619) -110 NM_030051 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_73_56_0.0910157473194566_5.87839788782447_0.347443112052874 chr14 121247981 121248494 + 0.347443112052874 NA promoter-TSS (NR_155502) promoter-TSS (NR_155502) -469 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_73_56_0.0910157473194566_5.87839788782447_0.347443112052874-2 chr8 77548981 77549732 + 0.347443112052874 NA promoter-TSS (NM_001081240) promoter-TSS (NM_001081240) -41 NM_001081240 102182 Mm.197630 NM_178903 ENSMUSG00000037134 Prmt9 AI931714|Prmt10 protein arginine methyltransferase 9 protein-coding common_peak1_342_289_-0.0590018562212382_8.15040816190432_0.347372966730885 chr11 72500518 72503575 + 0.347372966730885 NA intron (NM_029932, intron 9 of 11) intron (NM_029932, intron 9 of 11) -12126 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak1_145_112_0.0771814935774948_6.85876970920394_0.347098583729822 chr7 97579890 97580900 + 0.347098583729822 NA promoter-TSS (NM_001177947) promoter-TSS (NM_001177947) 499 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding common_peak1_179_155_-0.0881440305821535_7.24133020357117_0.347053337503865 chr1 153129036 153131555 + 0.347053337503865 NA intron (NM_008485, intron 19 of 23) intron (NM_008485, intron 19 of 23) 56152 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_99_88_-0.120489548387334_6.41548865677273_0.347023668913793 chr2 140066239 140067291 + 0.347023668913793 NA promoter-TSS (NR_110350) promoter-TSS (NR_110350) 40 NM_001159640 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak1_99_88_-0.120489548387334_6.41548865677273_0.347023668913793 chr18 75374866 75375550 + 0.347023668913793 NA intron (NM_001042660, intron 2 of 3) intron (NM_001042660, intron 2 of 3) 7843 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_107_82_0.0904524399799902_6.42026565133692_0.347023668913793-2 chr8 70129383 70130392 + 0.347023668913793 NA TTS (NM_011266) TTS (NM_011266) -1440 NR_104434 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding common_peak2_107_82_0.0904524399799902_6.42026565133692_0.347023668913793 chr3 32396009 32396709 + 0.347023668913793 NA Intergenic Intergenic -30694 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_99_88_-0.120489548387334_6.41548865677273_0.347023668913793-2 chr3 142881135 142881938 + 0.347023668913793 NA promoter-TSS (NR_152127) promoter-TSS (NR_152127) 468 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding common_peak1_99_88_-0.120489548387334_6.41548865677273_0.347023668913793-3 chr4 120825312 120826044 + 0.347023668913793 NA promoter-TSS (NM_001277095) promoter-TSS (NM_001277095) 63 NM_001277095 18046 Mm.318389 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252 chr12 24680211 24681021 + 0.346766333527252 NA intron (NM_001004455, intron 1 of 4) intron (NM_001004455, intron 1 of 4) 1179 NM_138686 12879 Mm.52265 NM_138686 ENSMUSG00000062563 Cys1 2900006B19Rik|AV218859|Ccap|ck|cpk cystin 1 protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-7 chr8 77506734 77507439 + 0.346766333527252 NA intron (NM_030113, intron 1 of 22) B4A|SINE|B4 -9970 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-7 chr4 156228072 156228648 + 0.346766333527252 NA TTS (NM_198305) TTS (NM_198305) 182 NM_001008233 231002 Mm.423124 NM_001008233 ENSMUSG00000078485 Plekhn1 BC025458 pleckstrin homology domain containing, family N member 1 protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-2 chr12 71015254 71015723 + 0.346766333527252 NA promoter-TSS (NM_001081195) promoter-TSS (NM_001081195) 335 NR_045056 73204 Mm.363770 NR_045055 ENSMUSG00000085622 3110056K07Rik 4921536K06Rik RIKEN cDNA 3110056K07 gene ncRNA common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-8 chr8 23038690 23039070 + 0.346766333527252 NA intron (NM_001277284, intron 1 of 42) intron (NM_001277284, intron 1 of 42) 3781 NM_001277284 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-3 chr15 25875927 25876651 + 0.346766333527252 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 32991 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-8 chr9 106477380 106477975 + 0.346766333527252 NA promoter-TSS (NM_001311150) promoter-TSS (NM_001311150) 368 NM_145620 27966 Mm.239997 NM_145620 ENSMUSG00000041506 Rrp9 55kDa|D19435|D9Wsu10e|Rnu3ip2|U3-55k RRP9, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-3 chr11 72490163 72490686 + 0.346766333527252 NA promoter-TSS (NM_153060) promoter-TSS (NM_153060) -504 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak1_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-2 chr12 84218576 84219157 + 0.346766333527252 NA promoter-TSS (NM_001163501) promoter-TSS (NM_001163501) 15 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-5 chr5 34169810 34170461 + 0.346766333527252 NA promoter-TSS (NM_001289804) promoter-TSS (NM_001289804) -609 NM_001289803 272158 Mm.319286 NM_181857 ENSMUSG00000045102 Poln POL4P DNA polymerase N protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-4 chr14 61647920 61648617 + 0.346766333527252 NA intron (NR_028264, intron 1 of 6) CpG -16158 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-5 chr4 59549586 59549935 + 0.346766333527252 NA promoter-TSS (NM_178164) promoter-TSS (NM_178164) -396 NM_144904 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-5 chr2 26964374 26964791 + 0.346766333527252 NA promoter-TSS (NM_207234) promoter-TSS (NM_207234) -196 NM_207234 227656 Mm.291874 NM_207234 ENSMUSG00000052406 Rexo4 Gm111|Rex4|Xpmc2h REX4, 3'-5' exonuclease protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-3 chr13 108402102 108402708 + 0.346766333527252 NA Intergenic Intergenic 86068 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-6 chr4 141882365 141882940 + 0.346766333527252 NA Intergenic Intergenic -7732 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-6 chr2 153291128 153291782 + 0.346766333527252 NA promoter-TSS (NM_008444) promoter-TSS (NM_008444) 39 NM_008444 16569 Mm.315560 NM_008444 ENSMUSG00000027475 Kif3b AI854312|AW549267|mKIAA0359 kinesin family member 3B protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-6 chr4 94555946 94556704 + 0.346766333527252 NA intron (NM_026368, intron 1 of 5) CpG 471 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding common_peak2_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-2 chr12 75544608 75545226 + 0.346766333527252 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 51283 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-4 chr7 19228344 19228628 + 0.346766333527252 NA promoter-TSS (NM_207525) promoter-TSS (NM_207525) 97 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-7 chr7 126776575 126777252 + 0.346766333527252 NA promoter-TSS (NM_026875) promoter-TSS (NM_026875) -62 NM_026875 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee like 3 protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-2 chr10 93305485 93306077 + 0.346766333527252 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 5378 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-7 chr5 34949467 34950145 + 0.346766333527252 NA intron (NM_173402, intron 1 of 16) CpG 358 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak1_43_40_-0.178376602021023_5.26836370360757_0.346766333527252 chr10 128748276 128748843 + 0.346766333527252 NA exon (NM_001253704, exon 1 of 4) exon (NM_001253704, exon 1 of 4) 104 NM_001253704 78428 Mm.27358 NM_030100 ENSMUSG00000064030 Pym1 A030010B05Rik|Pym|Wibg PYM homolog 1, exon junction complex associated factor protein-coding common_peak1_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-3 chr19 32595610 32596321 + 0.346766333527252 NA intron (NM_001201470, intron 1 of 11) CpG 250 NM_001201470 23972 Mm.203916 NM_011864 ENSMUSG00000024899 Papss2 1810018P12Rik|AI159688|AtpsU2|Atpsk2|Sk2|bm 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding common_peak2_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-3 chr3 7612193 7612904 + 0.346766333527252 NA intron (NM_001313888, intron 1 of 5) intron (NM_001313888, intron 1 of 5) 345 NM_001313890 16196 Mm.3825 NM_008371 ENSMUSG00000040329 Il7 A630026I06Rik|Il-7|hlb368 interleukin 7 protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-6 chr5 64112901 64113324 + 0.346766333527252 NA intron (NM_025700, intron 12 of 13) intron (NM_025700, intron 12 of 13) 20173 NM_001356964 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-4 chr2 32678341 32679144 + 0.346766333527252 NA intron (NM_001146348, intron 11 of 14) intron (NM_001146348, intron 11 of 14) 9024 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252 chr11 116130879 116131618 + 0.346766333527252 NA promoter-TSS (NM_178802) promoter-TSS (NM_178802) -120 NM_178802 338364 Mm.439976 NM_178802 ENSMUSG00000054517 Trim65 4732463G12Rik tripartite motif-containing 65 protein-coding common_peak2_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-4 chr6 97205229 97205523 + 0.346766333527252 NA intron (NM_011666, intron 1 of 17) intron (NM_011666, intron 1 of 17) 271 NM_001301857 22200 Mm.277626 NM_011666 ENSMUSG00000030061 Uba3 A830034N06Rik|AI256736|AI848246|AW546539|Ube1c ubiquitin-like modifier activating enzyme 3 protein-coding common_peak2_43_40_-0.178376602021023_5.26836370360757_0.346766333527252 chr1 21053004 21053471 + 0.346766333527252 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 25988 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-4 chr19 8880310 8880882 + 0.346766333527252 NA exon (NM_001160356, exon 2 of 2) exon (NM_001160356, exon 2 of 2) 337 NM_001160356 107197 Mm.381181 NM_001160356 ENSMUSG00000071654 Uqcc3 AI462493|Cbp4 ubiquinol-cytochrome c reductase complex assembly factor 3 protein-coding common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-9 chr9 35266936 35267664 + 0.346766333527252 NA promoter-TSS (NM_028040) promoter-TSS (NM_028040) 505 NM_175411 109229 Mm.24197 NM_175411 ENSMUSG00000050471 Fam118b 2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l family with sequence similarity 118, member B protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252 chr10 89530430 89531301 + 0.346766333527252 NA intron (NM_001163504, intron 1 of 9) intron (NM_001163504, intron 1 of 9) 2757 NM_001163504 20186 Mm.3095 NM_009108 ENSMUSG00000047638 Nr1h4 AI957360|Fxr|HRR1|RIP14|Rxrip14 nuclear receptor subfamily 1, group H, member 4 protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-5 chr16 23316776 23317305 + 0.346766333527252 NA intron (NM_001252506, intron 1 of 6) intron (NM_001252506, intron 1 of 6) 26570 NM_001252506 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252 chr1 40444498 40445282 + 0.346766333527252 NA intron (NM_001025602, intron 6 of 10) intron (NM_001025602, intron 6 of 10) 5261 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-4 chr19 44909241 44909687 + 0.346766333527252 NA Intergenic Intergenic -21655 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_43_40_-0.178376602021023_5.26836370360757_0.346766333527252-5 chr8 117372557 117372879 + 0.346766333527252 NA intron (NM_028941, intron 1 of 20) intron (NM_028941, intron 1 of 20) 23548 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-2 chr11 101784054 101784664 + 0.346766333527252 NA intron (NM_008815, intron 2 of 12) intron (NM_008815, intron 2 of 12) 951 NM_008815 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding common_peak1_48_36_0.123904777737105_5.2714057544975_0.346766333527252-3 chr13 13392799 13393476 + 0.346766333527252 NA exon (NM_031999, exon 1 of 7) exon (NM_031999, exon 1 of 7) 487 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding common_peak2_47_36_0.0943673012430555_5.25663701625048_0.346766333527252-8 chr9 72701625 72702153 + 0.346766333527252 NA intron (NM_001357998, intron 1 of 23) B1_Mus1|SINE|Alu 8591 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_48_36_0.123904777737105_5.2714057544975_0.346766333527252-2 chr13 98014607 98015375 + 0.346766333527252 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 191174 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak1_191_148_0.0705421872633565_7.25443961409384_0.346750482202772 chr2 131261933 131263852 + 0.346750482202772 NA promoter-TSS (NR_149748) promoter-TSS (NR_149748) 53 NR_149748 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding common_peak1_347_293_-0.0580336803781289_8.1706555046473_0.346728115729438 chr19 28290475 28293261 + 0.346728115729438 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -280702 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_74_57_0.0851534692521909_5.90055772975367_0.346662596190348-2 chr5 36292506 36293146 + 0.346662596190348 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) -8744 NR_106162 102465792 NR_106162 ENSMUSG00000098884 Mir7689 Gm27434|mmu-mir-7689 microRNA 7689 ncRNA common_peak1_75_57_0.104127479844331_5.91004473504974_0.346662596190348-2 chr7 130518558 130519495 + 0.346662596190348 NA intron (NM_001271343, intron 1 of 11) intron (NM_001271343, intron 1 of 11) 554 NM_001136054 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding common_peak2_75_57_0.104127479844331_5.91004473504974_0.346662596190348 chr19 8722560 8723214 + 0.346662596190348 NA promoter-TSS (NR_002896) promoter-TSS (NR_002896) 482 NM_001161413 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_75_57_0.104127479844331_5.91004473504974_0.346662596190348-2 chr2 167015322 167015999 + 0.346662596190348 NA intron (NM_153065, intron 1 of 20) intron (NM_153065, intron 1 of 20) 347 NM_153065 228889 Mm.295031 NM_153065 ENSMUSG00000017999 Ddx27 C86129 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein-coding common_peak2_69_62_-0.132978910527358_5.91079046823624_0.346662596190348-3 chr7 16816384 16817245 + 0.346662596190348 NA promoter-TSS (NM_173430) promoter-TSS (NM_173430) -82 NM_173430 243853 Mm.39703 NM_173430 ENSMUSG00000048920 Fkrp A830029B19Rik|AI842067|AI847300|LGMD1I|MDC1C fukutin related protein protein-coding common_peak1_69_62_-0.132978910527358_5.91079046823624_0.346662596190348-3 chr9 109081806 109082775 + 0.346662596190348 NA promoter-TSS (NM_025689) promoter-TSS (NM_025689) 91 NM_183250 66167 Mm.2395 NM_183250 ENSMUSG00000091537 Tma7 1110017O22Rik|Ccdc72 translational machinery associated 7 protein-coding common_peak1_74_57_0.0851534692521909_5.90055772975367_0.346662596190348-2 chr19 47865186 47865662 + 0.346662596190348 NA promoter-TSS (NM_026619) promoter-TSS (NM_026619) -121 NM_030051 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_69_62_-0.132978910527358_5.91079046823624_0.346662596190348 chr13 23738887 23739660 + 0.346662596190348 NA exon (NM_015786, exon 1 of 1) exon (NM_015786, exon 1 of 1) 466 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding common_peak2_69_62_-0.132978910527358_5.91079046823624_0.346662596190348-2 chr2 130629342 130630073 + 0.346662596190348 NA intron (NM_080562, intron 1 of 5) CpG 320 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding common_peak1_75_57_0.104127479844331_5.91004473504974_0.346662596190348 chr7 28267893 28268864 + 0.346662596190348 NA exon (NM_198425, exon 1 of 1) exon (NM_198425, exon 1 of 1) 497 NM_198425 386655 Mm.258201 NM_198425 ENSMUSG00000046058 Eid2 Cri2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding common_peak2_69_62_-0.132978910527358_5.91079046823624_0.346662596190348-4 chr7 113146526 113147743 + 0.346662596190348 NA Intergenic Intergenic -5119 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_74_57_0.0851534692521909_5.90055772975367_0.346662596190348 chr19 8892911 8893679 + 0.346662596190348 NA intron (NM_176843, intron 1 of 1) intron (NM_176843, intron 1 of 1) 308 NM_176843 109077 Mm.290474 NM_176843 ENSMUSG00000071652 Ints5 1110055N21Rik|mKIAA1698 integrator complex subunit 5 protein-coding common_peak1_75_57_0.104127479844331_5.91004473504974_0.346662596190348-4 chr9 67040370 67041665 + 0.346662596190348 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) 2854 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_69_62_-0.132978910527358_5.91079046823624_0.346662596190348-2 chr17 35978861 35979739 + 0.346662596190348 NA promoter-TSS (NM_008136) promoter-TSS (NM_008136) 167 NM_145487 75210 Mm.40036 NM_145487 ENSMUSG00000038500 Prr3 4930540G07Rik|Cat56 proline-rich polypeptide 3 protein-coding common_peak2_68_62_-0.153591019476208_5.90048441376181_0.346662596190348 chr8 46686997 46687493 + 0.346662596190348 NA Intergenic Intergenic 52270 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak1_74_57_0.0851534692521909_5.90055772975367_0.346662596190348 chr1 44147932 44148732 + 0.346662596190348 NA intron (NM_011729, intron 1 of 14) intron (NM_011729, intron 1 of 14) 588 NM_011729 22592 Mm.2213 NM_011729 ENSMUSG00000026048 Ercc5 Xpg excision repair cross-complementing rodent repair deficiency, complementation group 5 protein-coding common_peak1_75_57_0.104127479844331_5.91004473504974_0.346662596190348-3 chr8 46471080 46471616 + 0.346662596190348 NA intron (NM_007981, intron 1 of 20) CpG 311 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_69_62_-0.132978910527358_5.91079046823624_0.346662596190348 chr11 86608202 86609038 + 0.346662596190348 NA intron (NM_001356531, intron 8 of 11) B1_Mur4|SINE|Alu -24462 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_361_283_0.048392490980202_8.17394336499478_0.346569697472369 chr8 108713756 108716441 + 0.346569697472369 NA 5' UTR (NM_007496, exon 1 of 10) 5' UTR (NM_007496, exon 1 of 10) 454 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-20 chr7 4740200 4740505 + 0.346516360977213 NA 5' UTR (NM_001358044, exon 1 of 9) 5' UTR (NM_001358044, exon 1 of 9) 225 NM_001358044 232811 Mm.247844 NM_146177 ENSMUSG00000059851 Kmt5c BC024816|Suv4-20h2|Suv420h2 lysine methyltransferase 5C protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-4 chr11 16809740 16810126 + 0.346516360977213 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 57730 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-9 chr16 24450262 24450678 + 0.346516360977213 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 2379 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-17 chr3 158272990 158273209 + 0.346516360977213 NA intron (NM_001081358, intron 8 of 27) intron (NM_001081358, intron 8 of 27) 236417 NM_001289524 67144 Mm.358704 NM_024194 ENSMUSG00000063052 Lrrc40 2610040E16Rik|AI837674 leucine rich repeat containing 40 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213 chr1 136717380 136717850 + 0.346516360977213 NA intron (NR_037986, intron 2 of 4) intron (NR_037986, intron 2 of 4) 21404 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA unique_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-3 chr6 114965313 114965802 + 0.346516360977213 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 3646 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-3 chr13 63231723 63232040 + 0.346516360977213 NA intron (NM_001289926, intron 11 of 15) intron (NM_001289926, intron 11 of 15) -8148 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-6 chr11 100850135 100850482 + 0.346516360977213 NA intron (NM_001113563, intron 1 of 18) CpG 277 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-5 chr11 69070413 69070675 + 0.346516360977213 NA promoter-TSS (NM_025838) promoter-TSS (NM_025838) -265 NM_025838 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-4 chr15 76476837 76477100 + 0.346516360977213 NA promoter-TSS (NM_001331154) promoter-TSS (NM_001331154) 301 NM_013481 12181 Mm.4283 NM_013481 ENSMUSG00000022557 Bop1 AU020183|AW146150|D18861|Erb1p|Kiaa0124|mKIAA0124 block of proliferation 1 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-12 chr2 35234600 35235083 + 0.346516360977213 NA Intergenic Intergenic -21518 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-16 chr8 11632919 11633260 + 0.346516360977213 NA intron (NM_001167967, intron 1 of 4) intron (NM_001167967, intron 1 of 4) 1947 NR_030781 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-11 chr18 65800209 65800423 + 0.346516360977213 NA promoter-TSS (NM_025468) promoter-TSS (NM_025468) -262 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-5 chr16 6889543 6889867 + 0.346516360977213 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -149665 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-10 chr18 38103784 38104108 + 0.346516360977213 NA Intergenic Intergenic -104977 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213 chr17 78916552 78917040 + 0.346516360977213 NA intron (NM_001177403, intron 1 of 4) intron (NM_001177403, intron 1 of 4) 297 NM_001177402 68554 Mm.391820 NM_001177402 ENSMUSG00000062691 Cebpzos 1110001A16Rik CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-19 chr6 35424353 35424714 + 0.346516360977213 NA Intergenic Intergenic 93687 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-11 chr3 144506763 144507077 + 0.346516360977213 NA intron (NM_001355234, intron 1 of 6) intron (NM_001355234, intron 1 of 6) 63296 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-14 chr2 148477057 148477717 + 0.346516360977213 NA Intergenic Intergenic -33852 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding unique_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213 chr6 124903944 124904243 + 0.346516360977213 NA TTS (NM_008479) TTS (NM_008479) 7612 NM_008479 16768 Mm.4528 NM_008479 ENSMUSG00000030124 Lag3 CD223|LAG-3|Ly66 lymphocyte-activation gene 3 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-2 chr1 134411857 134412107 + 0.346516360977213 NA TTS (NM_001355133) TTS (NM_001355133) -3396 NM_028320 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding unique_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-4 chr8 115108686 115109340 + 0.346516360977213 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 597881 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-2 chr4 149992511 149992936 + 0.346516360977213 NA intron (NM_001291004, intron 3 of 4) intron (NM_001291004, intron 3 of 4) 10513 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213 chr1 71970827 71971119 + 0.346516360977213 NA intron (NR_040454, intron 1 of 2) intron (NR_040454, intron 1 of 2) 34222 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-13 chr2 74705428 74705938 + 0.346516360977213 NA exon (NM_008276, exon 1 of 2) exon (NM_008276, exon 1 of 2) 194 NM_008276 15437 Mm.280673 NM_008276 ENSMUSG00000027102 Hoxd8 4921540P06Rik|AI047735|Hox-4.3|Hox-5.4 homeobox D8 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-12 chr4 21776298 21776603 + 0.346516360977213 NA intron (NM_152825, intron 1 of 17) CpG 180 NM_152825 77593 Mm.154306 NM_152825 ENSMUSG00000040455 Usp45 3110003C05Rik|4930550B20Rik|AI843191|Gcap7 ubiquitin specific petidase 45 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-15 chr6 128033177 128033671 + 0.346516360977213 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 110154 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-21 chrX 135742468 135743030 + 0.346516360977213 NA promoter-TSS (NM_026081) promoter-TSS (NM_026081) 57 NM_001005385 67298 Mm.271980 NM_026081 ENSMUSG00000043384 Gprasp1 2210415K24Rik|3110031O14Rik|C87852|GASP|GASP1 G protein-coupled receptor associated sorting protein 1 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-13 chr4 56305567 56305936 + 0.346516360977213 NA Intergenic Intergenic 435674 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Gm26657|Tact1 actin-like 7b protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-3 chr10 93944788 93945241 + 0.346516360977213 NA Intergenic Intergenic 18849 NR_029764 723908 NR_029764 ENSMUSG00000065607 Mir331 Mirn331|mmu-mir-331 microRNA 331 ncRNA common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-8 chr17 36024729 36024962 + 0.346516360977213 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -4285 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-16 chr3 96098162 96098568 + 0.346516360977213 NA Intergenic Intergenic -6162 NM_001025613 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-10 chr3 54358733 54359074 + 0.346516360977213 NA Intergenic Intergenic -2204 NM_001198766 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-15 chr3 8994344 8994716 + 0.346516360977213 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 9674 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-17 chr8 78742644 78742983 + 0.346516360977213 NA Intergenic Intergenic 78339 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-9 chr3 31023425 31023857 + 0.346516360977213 NA intron (NM_008857, intron 2 of 17) B3|SINE|B2 -15325 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-8 chr12 59012391 59012888 + 0.346516360977213 NA promoter-TSS (NM_009147) promoter-TSS (NM_009147) -622 NM_001361956 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-2 chr12 77949118 77949577 + 0.346516360977213 NA Intergenic Intergenic -277308 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-2 chr7 133111523 133112103 + 0.346516360977213 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) 11670 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-6 chr16 14159665 14159874 + 0.346516360977213 NA promoter-TSS (NM_001081154) promoter-TSS (NM_001081154) 143 NR_030252 723916 NR_030252 ENSMUSG00000070074 Mir484 Mirn484|mir-484|mmu-mir-484 microRNA 484 ncRNA common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-14 chr5 39644271 39644560 + 0.346516360977213 NA intron (NM_010474, intron 1 of 1) CpG 216 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak2_27_20_0.139381671013164_4.46200825828534_0.346516360977213-7 chr16 44494918 44495204 + 0.346516360977213 NA intron (NM_172506, intron 8 of 18) intron (NM_172506, intron 8 of 18) 63068 NR_037242 100526478 NR_037242 ENSMUSG00000093046 Mir3081 mir-3081|mmu-mir-3081 microRNA 3081 ncRNA common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-7 chr11 115513936 115514364 + 0.346516360977213 NA intron (NM_008258, intron 1 of 4) CpG 243 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Jpt1 Hn1 Jupiter microtubule associated homolog 1 protein-coding common_peak1_27_20_0.139381671013164_4.46200825828534_0.346516360977213-18 chr4 5793925 5794264 + 0.346516360977213 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 69782 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-7 chr6 47920591 47920841 + 0.34651636097721 NA 5' UTR (NM_001145881, exon 1 of 5) 5' UTR (NM_001145881, exon 1 of 5) 148 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-8 chr7 19342269 19342673 + 0.34651636097721 NA Intergenic Intergenic -2600 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-9 chr7 102249811 102250048 + 0.34651636097721 NA intron (NM_019566, intron 1 of 1) CpG 189 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721 chr1 135170159 135170381 + 0.34651636097721 NA Intergenic Intergenic -2589 NM_134438 171469 Mm.272290 NM_134438 ENSMUSG00000026424 Gpr37l1 AW047233|CAG-18|D0Kist8 G protein-coupled receptor 37-like 1 protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-3 chr13 51973196 51973526 + 0.34651636097721 NA Intergenic Intergenic -123380 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-2 chr11 117941874 117942147 + 0.34651636097721 NA Intergenic Intergenic 27356 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-7 chr4 137641282 137641544 + 0.34651636097721 NA intron (NM_001355588, intron 22 of 26) intron (NM_001355588, intron 22 of 26) -23313 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding unique_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-2 chr5 92962246 92962799 + 0.34651636097721 NA intron (NM_001077596, intron 9 of 9) intron (NM_001077596, intron 9 of 9) 64529 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721 chr16 14361032 14361406 + 0.34651636097721 NA promoter-TSS (NM_008576) promoter-TSS (NM_008576) -339 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-4 chr19 46152667 46152933 + 0.34651636097721 NA intron (NM_178930, intron 1 of 39) CpG 242 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-10 chr9 22116761 22117063 + 0.34651636097721 NA 5' UTR (NM_001357309, exon 1 of 3) 5' UTR (NM_001357309, exon 1 of 3) 283 NM_001357311 66126 Mm.29801 NM_170777 ENSMUSG00000013822 Elof1 1110011K10Rik ELF1 homolog, elongation factor 1 protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-2 chr13 23445389 23445752 + 0.34651636097721 NA Intergenic PB1D7|SINE|Alu -14553 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-10 chr8 8605052 8605501 + 0.34651636097721 NA Intergenic Intergenic 55497 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721 chr11 20858928 20859304 + 0.34651636097721 NA Intergenic Intergenic -28008 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-11 chr9 88037130 88037582 + 0.34651636097721 NA Intergenic Intergenic -290253 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-5 chr3 121706809 121707317 + 0.34651636097721 NA Intergenic MIR3|SINE|MIR -16474 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-9 chr7 45523855 45524450 + 0.34651636097721 NA exon (NM_008654, exon 2 of 3) exon (NM_008654, exon 2 of 3) 2116 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-6 chr4 59387606 59387942 + 0.34651636097721 NA intron (NM_001163288, intron 6 of 16) intron (NM_001163288, intron 6 of 16) 50859 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-8 chr7 19096070 19096509 + 0.34651636097721 NA exon (NM_011383, exon 2 of 3) exon (NM_011383, exon 2 of 3) 1745 NM_011383 20475 Mm.3410 NM_011383 ENSMUSG00000040841 Six5 Dmahp|MDMAHP|TrexBF sine oculis-related homeobox 5 protein-coding common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-5 chr2 75683049 75683567 + 0.34651636097721 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 21355 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-3 chr11 120598733 120599032 + 0.34651636097721 NA promoter-TSS (NM_011568) promoter-TSS (NM_011568) 350 NM_001038230 66156 Mm.21645 NM_025389 ENSMUSG00000025135 Anapc11 1110011I19Rik|R75218 anaphase promoting complex subunit 11 protein-coding common_peak1_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-4 chr13 51973185 51973531 + 0.34651636097721 NA Intergenic Intergenic -123383 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_23_23_-0.274086854275907_4.4479190735832_0.34651636097721-6 chr4 114908805 114909342 + 0.34651636097721 NA promoter-TSS (NM_008593) promoter-TSS (NM_008593) -175 NM_008593 17301 Mm.7997 NM_008593 ENSMUSG00000055210 Foxd2 AI426778|Mf2 forkhead box D2 protein-coding common_peak1_101_89_-0.108241616339013_6.43773228816017_0.346488640381782 chr19 40518087 40519522 + 0.346488640381782 NA Intergenic L1M2|LINE|L1 -4992 NM_009166 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_101_89_-0.108241616339013_6.43773228816017_0.346488640381782 chr11 31550719 31551831 + 0.346488640381782 NA Intergenic Intergenic 120587 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_101_89_-0.108241616339013_6.43773228816017_0.346488640381782-2 chr19 53411524 53412178 + 0.346488640381782 NA Intergenic Intergenic -21217 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_101_89_-0.108241616339013_6.43773228816017_0.346488640381782-3 chr6 29735537 29736701 + 0.346488640381782 NA exon (NM_176996, exon 1 of 12) exon (NM_176996, exon 1 of 12) 622 NM_176996 319757 Mm.29279 NM_176996 ENSMUSG00000001761 Smo E130215L21Rik|Smoh|bnb|smoothened smoothened, frizzled class receptor protein-coding common_peak1_101_89_-0.108241616339013_6.43773228816017_0.346488640381782-3 chr4 118427547 118428504 + 0.346488640381782 NA promoter-TSS (NM_019422) promoter-TSS (NM_019422) -68 NM_001039175 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding common_peak1_101_89_-0.108241616339013_6.43773228816017_0.346488640381782-2 chr2 114654108 114655176 + 0.346488640381782 NA intron (NM_025675, intron 1 of 8) intron (NM_025675, intron 1 of 8) 322 NM_001356438 66632 Mm.117809 NM_025675 ENSMUSG00000057147 Dph6 5730421E18Rik|Atpbd4 diphthamine biosynthesis 6 protein-coding common_peak2_108_83_0.0863774623496854_6.4355061539536_0.346488640381757 chr12 84193101 84193735 + 0.346488640381757 NA intron (NM_001163501, intron 1 of 12) CpG 597 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_108_83_0.0863774623496854_6.4355061539536_0.346488640381757-2 chr3 133310157 133311129 + 0.346488640381757 NA intron (NM_001293641, intron 1 of 11) intron (NM_001293641, intron 1 of 11) 533 NM_001293641 74776 Mm.210305 NM_146141 ENSMUSG00000028013 Ppa2 1110013G13Rik|Sid6306 pyrophosphatase (inorganic) 2 protein-coding common_peak1_108_83_0.0863774623496854_6.4355061539536_0.346488640381757 chr9 63696931 63698354 + 0.346488640381757 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 60352 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_242_189_0.0573074674508769_7.59850934205639_0.346483515832232 chr19 42015633 42016856 + 0.346483515832232 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) -19794 NM_020033 56642 Mm.143737 NM_020033 ENSMUSG00000025172 Ankrd2 Arpp|mArpp ankyrin repeat domain 2 (stretch responsive muscle) protein-coding common_peak1_139_121_-0.093491304163571_6.8839916854811_0.346314203489899-2 chr9 103032622 103034199 + 0.346314203489899 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 24921 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_147_114_0.0713607309665791_6.88117041642766_0.346314203489899 chr7 49329331 49331552 + 0.346314203489899 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 84252 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_147_114_0.0713607309665791_6.88117041642766_0.346314203489899-2 chr7 55961554 55962846 + 0.346314203489899 NA promoter-TSS (NR_015495) promoter-TSS (NR_015495) 293 NM_001256133 93790 Mm.37249 NM_023647 ENSMUSG00000030452 Nipa2 2600017P10Rik|3830408P04Rik|AB041581 non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) protein-coding common_peak1_139_121_-0.093491304163571_6.8839916854811_0.346314203489899 chr11 50212422 50214082 + 0.346314203489899 NA Intergenic Intergenic -2432 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak1_102_90_-0.110207275140469_6.45269100262846_0.345965918761608 chr2 13404216 13405825 + 0.345965918761608 NA intron (NM_001081084, intron 27 of 66) B1F|SINE|Alu 86856 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_109_84_0.0823863856399925_6.4505841289577_0.345965918761608 chr3 145924443 145925306 + 0.345965918761608 NA intron (NM_009740, intron 1 of 2) CpG 612 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_109_84_0.0823863856399925_6.4505841289577_0.345965918761608-2 chr19 10577520 10578406 + 0.345965918761608 NA promoter-TSS (NM_028411) promoter-TSS (NM_028411) 515 NM_001282067 225912 Mm.252701 NM_201351 ENSMUSG00000034445 Cyb561a3 2310004G04Rik|Cybasc3|Lcytb cytochrome b561 family, member A3 protein-coding common_peak2_109_84_0.0823863856399925_6.4505841289577_0.345965918761608-3 chr3 107332258 107333005 + 0.345965918761608 NA exon (NM_001045807, exon 1 of 2) exon (NM_001045807, exon 1 of 2) 658 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak2_109_84_0.0823863856399925_6.4505841289577_0.345965918761608 chr18 75495472 75496697 + 0.345965918761608 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -18561 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_109_84_0.0823863856399925_6.4505841289577_0.345965918761608-4 chr8 127226747 127227597 + 0.345965918761608 NA intron (NM_001122850, intron 2 of 15) intron (NM_001122850, intron 2 of 15) -72440 NM_001013581 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak1_140_122_-0.0950725793829745_6.89497821564775_0.34593194661749 chr3 37905981 37907348 + 0.34593194661749 NA intron (NR_040559, intron 1 of 3) L1Md_F3|LINE|L1 7851 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_76_58_0.0981914028093476_5.93173875076651_0.345907904941242-2 chr2 104590524 104591147 + 0.345907904941242 NA intron (NM_001037326, intron 1 of 1) CpG 351 NM_001037326 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding common_peak2_70_63_-0.135379258293269_5.93231037085337_0.345907904941242-2 chr4 40268765 40269745 + 0.345907904941242 NA promoter-TSS (NM_001349093) promoter-TSS (NM_001349093) -324 NM_001349093 100504309 Mm.392019 NM_001349093 Smim27 2010003O02Rik|Toporsos small integral membrane protein 27 protein-coding common_peak2_76_58_0.0981914028093476_5.93173875076651_0.345907904941242 chr13 94788927 94789547 + 0.345907904941242 NA intron (NM_009321, intron 1 of 3) CpG 294 NM_009321 21371 Mm.379025 NM_009321 ENSMUSG00000042043 Tbca Tbca13 tubulin cofactor A protein-coding common_peak2_76_58_0.0981914028093476_5.93173875076651_0.345907904941242-3 chr7 19344431 19345324 + 0.345907904941242 NA promoter-TSS (NM_007948) promoter-TSS (NM_007948) -194 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak2_70_63_-0.135379258293269_5.93231037085337_0.345907904941242-3 chr9 110685399 110685985 + 0.345907904941242 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 29189 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_76_58_0.0981914028093476_5.93173875076651_0.345907904941242-2 chr7 19344430 19345340 + 0.345907904941242 NA promoter-TSS (NM_007948) promoter-TSS (NM_007948) -186 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak2_70_63_-0.135379258293269_5.93231037085337_0.345907904941242 chr1 105431009 105431898 + 0.345907904941242 NA Intergenic ID_B1|SINE|B4 -74743 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_70_63_-0.135379258293269_5.93231037085337_0.345907904941242-3 chr2 60711208 60712497 + 0.345907904941242 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) 10751 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_70_63_-0.135379258293269_5.93231037085337_0.345907904941242 chr17 80206469 80207269 + 0.345907904941242 NA intron (NM_001360435, intron 1 of 6) CpG 436 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding common_peak1_70_63_-0.135379258293269_5.93231037085337_0.345907904941242-2 chr18 60526288 60527187 + 0.345907904941242 NA intron (NM_026302, intron 1 of 12) intron (NM_026302, intron 1 of 12) 583 NM_001357462 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding common_peak2_76_58_0.0981914028093476_5.93173875076651_0.345907904941242-4 chr8 66486101 66486947 + 0.345907904941242 NA promoter-TSS (NM_025465) promoter-TSS (NM_025465) 6 NM_025465 66282 Mm.294985 NM_025465 ENSMUSG00000025591 Tma16 1810029B16Rik translation machinery associated 16 protein-coding common_peak1_76_58_0.0981914028093476_5.93173875076651_0.345907904941242 chr4 62359851 62360487 + 0.345907904941242 NA promoter-TSS (NM_175090) promoter-TSS (NM_175090) 427 NM_001355385 338355 Mm.357792 NM_001045528 ENSMUSG00000066151 Fkbp15 BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674 FK506 binding protein 15 protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011-4 chr17 72966213 72966864 + 0.345592563585011 NA Intergenic Intergenic 48233 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-5 chr3 145892936 145893579 + 0.345592563585011 NA 3' UTR (NM_026993, exon 6 of 6) 3' UTR (NM_026993, exon 6 of 6) -31005 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_49_37_0.114371348708723_5.30511318779795_0.345592563585011 chr13 90797530 90798200 + 0.345592563585011 NA Intergenic Intergenic 107490 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011-7 chr8 45358274 45358702 + 0.345592563585011 NA intron (NM_153535, intron 1 of 13) CpG 23803 NM_153535 212326 Mm.51259 NM_153535 ENSMUSG00000070044 Fam149a AW213256|mKIAA4166 family with sequence similarity 149, member A protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011 chr1 192138175 192138628 + 0.345592563585011 NA promoter-TSS (NM_144814) promoter-TSS (NM_144814) -361 NM_001290282 214742 Mm.207457 NM_144814 ENSMUSG00000037395 Rcor3 4921514E24Rik|C730034D20Rik|E130101E15Rik REST corepressor 3 protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-7 chr7 19715943 19716422 + 0.345592563585011 NA promoter-TSS (NM_016871) promoter-TSS (NM_016871) -753 NM_016871 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-8 chr8 126844892 126845348 + 0.345592563585011 NA Intergenic Intergenic -3900 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_44_41_-0.180949275352177_5.30184278510267_0.345592563585011 chr1 36243616 36244149 + 0.345592563585011 NA intron (NM_198899, intron 1 of 40) intron (NM_198899, intron 1 of 40) 420 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding common_peak1_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-2 chr11 83895865 83896457 + 0.345592563585011 NA intron (NM_009330, intron 7 of 8) intron (NM_009330, intron 7 of 8) 43201 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011-6 chr7 31041853 31042604 + 0.345592563585011 NA promoter-TSS (NM_001111073) promoter-TSS (NM_001111073) 103 NM_008761 18301 Mm.1870 NM_008761 ENSMUSG00000009687 Fxyd5 EF-8|Oit2|RIC FXYD domain-containing ion transport regulator 5 protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-2 chr11 115933800 115934286 + 0.345592563585011 NA promoter-TSS (NM_130454) promoter-TSS (NM_130454) 384 NM_020483 57230 Mm.267810 NM_020483 ENSMUSG00000020755 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011 chr10 75170732 75171231 + 0.345592563585011 NA intron (NM_001081412, intron 16 of 22) intron (NM_001081412, intron 16 of 22) -41092 NM_153406 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-5 chr6 31317973 31318653 + 0.345592563585011 NA intron (NR_040261, intron 3 of 4) (TTTTG)n|Simple_repeat|Simple_repeat 80460 NR_040300 100503869 Mm.370532 NR_040300 ENSMUSG00000086212 Mkln1os Gm13845 muskelin 1, intracellular mediator containing kelch motifs, opposite strand ncRNA common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-3 chr19 27429451 27429785 + 0.345592563585011 NA promoter-TSS (NR_027987) promoter-TSS (NR_027987) 290 NM_177474 52874 Mm.261027 NM_177474 ENSMUSG00000041360 Pum3 1110069H02Rik|AA675048|D19Bwg1357e pumilio RNA-binding family member 3 protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-6 chr6 115270882 115271824 + 0.345592563585011 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -19148 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011-3 chr15 13275633 13276092 + 0.345592563585011 NA Intergenic Intergenic -102187 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-3 chr17 46932248 46932796 + 0.345592563585011 NA exon (NM_001177374, exon 46 of 47) exon (NM_001177374, exon 46 of 47) 22037 NM_008938 19133 Mm.291370 NM_008938 ENSMUSG00000023978 Prph2 AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds peripherin 2 protein-coding common_peak1_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-4 chr2 172644845 172645530 + 0.345592563585011 NA Intergenic Intergenic 94196 NM_001159696 21420 Mm.3629 NM_009335 ENSMUSG00000028640 Tfap2c AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c transcription factor AP-2, gamma protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011-2 chr13 24564774 24565285 + 0.345592563585011 NA Intergenic Intergenic -17160 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak2_44_41_-0.180949275352177_5.30184278510267_0.345592563585011-4 chr3 95105367 95105665 + 0.345592563585011 NA intron (NM_001293707, intron 1 of 14) intron (NM_001293707, intron 1 of 14) 1414 NM_008847 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak2_49_37_0.114371348708723_5.30511318779795_0.345592563585011-5 chr4 66829030 66829525 + 0.345592563585011 NA intron (NM_021297, intron 1 of 2) intron (NM_021297, intron 1 of 2) 1726 NM_021297 21898 Mm.38049 NM_021297 ENSMUSG00000039005 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 protein-coding common_peak2_141_123_-0.0966305482533869_6.90588103626018_0.345556090118983 chr2 147012611 147013868 + 0.345556090118983 NA intron (NM_001356402, intron 1 of 28) CpG 240 NM_001356402 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak1_150_116_0.0752331846736345_6.90798131192022_0.345556090118983 chr11 3201776 3203485 + 0.345556090118983 NA promoter-TSS (NM_001166547) promoter-TSS (NM_001166547) 47 NM_023743 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding common_peak2_150_116_0.0752331846736345_6.90798131192022_0.345556090118983 chr3 138527254 138528254 + 0.345556090118983 NA intron (NM_007917, intron 2 of 7) CpG 486 NM_001313980 13684 Mm.3941 NM_007917 ENSMUSG00000028156 Eif4e EG668879|Eif4e-ps|If4e|eIF-4E eukaryotic translation initiation factor 4E protein-coding common_peak1_306_239_0.0551753019061403_7.93447824656159_0.345530495807155 chr19 47853116 47855893 + 0.345530495807155 NA promoter-TSS (NM_010362) promoter-TSS (NM_010362) -469 NM_010362 14873 Mm.378931 NM_010362 ENSMUSG00000025068 Gsto1 AA407097|AI194287|AU018802|Gsto-1|Gstx|Spg-r|p28 glutathione S-transferase omega 1 protein-coding common_peak2_110_85_0.078476609009555_6.46550305920688_0.345455084168709 chr9 31029813 31031103 + 0.345455084168709 NA promoter-TSS (NM_172765) promoter-TSS (NM_172765) -186 NM_001115130 235132 Mm.239355 NM_172765 ENSMUSG00000047412 Zbtb44 6030404E16Rik|Btbd15|E230011F09 zinc finger and BTB domain containing 44 protein-coding common_peak2_103_91_-0.112133740748389_6.46749508568282_0.345455084168684 chr3 94974701 94975383 + 0.345455084168684 NA 5' UTR (NM_001293716, exon 1 of 10) 5' UTR (NM_001293716, exon 1 of 10) 311 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding common_peak1_103_91_-0.112133740748389_6.46749508568282_0.345455084168684 chr19 53411526 53412207 + 0.345455084168684 NA Intergenic Intergenic -21232 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_142_124_-0.0981657314009539_6.91670141896161_0.345186474558245 chr1 171328343 171330198 + 0.345186474558245 NA promoter-TSS (NM_001357552) promoter-TSS (NM_001357552) 125 NM_011615 21945 Mm.270139 NM_011615 ENSMUSG00000013973 Dedd CASP8IP1|DEFT|Dedpro1|FLDED1|KE05 death effector domain-containing protein-coding common_peak2_142_124_-0.0981657314009539_6.91670141896161_0.345186474558245-2 chr5 115011278 115012744 + 0.345186474558245 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 487 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_151_117_0.0724104460368169_6.91884827238025_0.345186474558245 chr9 102766814 102768389 + 0.345186474558245 NA Intergenic Intergenic 27953 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_71_64_-0.137711543928994_5.95351204106396_0.345177777143036-2 chr5 137103445 137104272 + 0.345177777143036 NA Intergenic Intergenic 12349 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_71_64_-0.137711543928994_5.95351204106396_0.345177777143036-3 chr8 115706293 115706961 + 0.345177777143036 NA exon (NM_001025577, exon 1 of 1) exon (NM_001025577, exon 1 of 1) 267 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_71_64_-0.137711543928994_5.95351204106396_0.345177777143036 chr12 111448382 111449267 + 0.345177777143036 NA intron (NM_009396, intron 6 of 11) intron (NM_009396, intron 6 of 11) 6163 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_77_59_0.0924282015008053_5.95310469635892_0.345177777143024-2 chr17 23803253 23803892 + 0.345177777143024 NA intron (NM_175229, intron 1 of 13) CpG 385 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_77_59_0.0924282015008053_5.95310469635892_0.345177777143024 chr8 25071611 25072365 + 0.345177777143024 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) 29823 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_77_59_0.0924282015008053_5.95310469635892_0.345177777143024 chr1 193567599 193568525 + 0.345177777143024 NA Intergenic Intergenic -60532 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak2_77_59_0.0924282015008053_5.95310469635892_0.345177777143024-2 chr8 105264170 105264923 + 0.345177777143024 NA promoter-TSS (NM_015821) promoter-TSS (NM_015821) 48 NM_001033161 71609 Mm.264255 NM_001033161 ENSMUSG00000031887 Tradd 9130005N23Rik|AA930854 TNFRSF1A-associated via death domain protein-coding common_peak1_308_241_0.0525047504378424_7.94511561249352_0.345168653085385 chr2 165883818 165886379 + 0.345168653085385 NA promoter-TSS (NM_001252584) promoter-TSS (NM_001252584) -260 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_250_195_0.0588545954059869_7.6441371418182_0.345116257154304 chr11 78164996 78167092 + 0.345116257154304 NA promoter-TSS (NM_009423) promoter-TSS (NM_009423) -494 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_309_242_0.0511839755543919_7.95040449138298_0.344989929602579 chr4 86668374 86671168 + 0.344989929602579 NA intron (NM_007408, intron 1 of 7) intron (NM_007408, intron 1 of 7) 288 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_112_86_0.0873792058115237_6.48663309875449_0.344955735607431-2 chr18 77064965 77066170 + 0.344955735607431 NA promoter-TSS (NM_001164168) promoter-TSS (NM_001164168) -113 NM_001164168 17344 Mm.6370 NM_008602 ENSMUSG00000025423 Pias2 6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2 protein inhibitor of activated STAT 2 protein-coding common_peak2_104_92_-0.114022195908016_6.48214771315402_0.344955735607431 chr18 32067709 32068505 + 0.344955735607431 NA intron (NM_173441, intron 1 of 13) CpG 373 NM_173441 73473 Mm.66853 NM_173441 ENSMUSG00000024384 Iws1 1700069O15Rik|3000008H23|AL117927|AW214353 IWS1, SUPT6 interacting protein protein-coding common_peak1_112_86_0.0873792058115237_6.48663309875449_0.344955735607431 chr1 74303500 74304542 + 0.344955735607431 NA intron (NM_027154, intron 1 of 11) CpG 315 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak2_112_86_0.0873792058115237_6.48663309875449_0.344955735607431-2 chr12 83687682 83688953 + 0.344955735607431 NA promoter-TSS (NM_008943) promoter-TSS (NM_008943) 165 NM_001362271 19164 Mm.998 NM_008943 ENSMUSG00000019969 Psen1 Ad3h|PS-1|PS1|S182 presenilin 1 protein-coding common_peak2_112_86_0.0873792058115237_6.48663309875449_0.344955735607431 chr11 84869091 84870138 + 0.344955735607431 NA promoter-TSS (NR_131201) promoter-TSS (NR_131201) -391 NR_131201 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA common_peak2_111_86_0.0746456387967083_6.48026631524708_0.344955735607431 chr2 144164890 144166162 + 0.344955735607431 NA Intergenic CpG 23764 NR_136884 433481 Mm.330630 NR_136884 ENSMUSG00000074758 Gm5535 EG433481 predicted gene 5535 ncRNA common_peak2_144_125_-0.0897649829420146_6.93239743202891_0.344822945751453 chr6 17463747 17465460 + 0.344822945751453 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 646 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_143_125_-0.0996786339737001_6.92744060651307_0.344822945751453 chr1 184032734 184034113 + 0.344822945751453 NA promoter-TSS (NM_022019) promoter-TSS (NM_022019) 575 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_310_243_0.0498727264444998_7.95567370078514_0.344812647732395 chr16 31591704 31594191 + 0.344812647732395 NA Intergenic Intergenic -25186 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_189_163_-0.0828416104655458_7.31613119938531_0.344737196000674 chr16 76372230 76373909 + 0.344737196000674 NA promoter-TSS (NM_173440) promoter-TSS (NM_173440) -20 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak2_241_206_-0.0722311760962446_7.6573713694512_0.344678603260894 chr11 51915449 51917505 + 0.344678603260894 NA Intergenic Intergenic -51154 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-8 chr9 78520150 78520349 + 0.344532117358383 NA Intergenic Intergenic -38525 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-5 chr12 80434603 80434807 + 0.344532117358383 NA intron (NM_177267, intron 1 of 8) intron (NM_177267, intron 1 of 8) 1896 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-31 chrX 142481947 142482195 + 0.344532117358383 NA Intergenic Intergenic -91536 NM_019477 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding unique_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383 chr1 135670752 135671015 + 0.344532117358383 NA Intergenic Intergenic -49180 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-19 chr6 17067794 17068100 + 0.344532117358383 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 2798 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-28 chr8 69868099 69868302 + 0.344532117358383 NA intron (NR_151668, intron 3 of 5) intron (NR_151668, intron 3 of 5) 19192 NM_026818 68709 Mm.334584 NM_026818 ENSMUSG00000044006 Cilp2 1110031K21Rik|AA407300|CLIP-2 cartilage intermediate layer protein 2 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-14 chr2 35273214 35273551 + 0.344532117358383 NA intron (NM_001206367, intron 2 of 17) intron (NM_001206367, intron 2 of 17) 6638 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-15 chr7 73539322 73539523 + 0.344532117358383 NA TTS (NR_037569) TTS (NR_037569) 2324 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-8 chr14 41486730 41486951 + 0.344532117358383 NA Intergenic Intergenic -86371 NM_001358037 100041722 Mm.425891 NM_001358037 ENSMUSG00000090440 1700049E17Rik2 - tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-18 chr5 113210351 113210669 + 0.344532117358383 NA Intergenic Intergenic -16399 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-12 chr5 65436704 65436984 + 0.344532117358383 NA Intergenic B3A|SINE|B2 -1002 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-8 chr18 33946598 33946843 + 0.344532117358383 NA intron (NM_013512, intron 2 of 23) intron (NM_013512, intron 2 of 23) 60486 NM_013512 13824 Mm.3465 NM_013512 ENSMUSG00000024376 Epb41l4a Epb4.1l4|Epb4.1l4a|NBL4 erythrocyte membrane protein band 4.1 like 4a protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-24 chr8 113634558 113634805 + 0.344532117358383 NA promoter-TSS (NM_001048143) promoter-TSS (NM_001048143) -905 NM_001048143 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-16 chr3 143192146 143192370 + 0.344532117358383 NA Intergenic Intergenic -50797 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-3 chr1 182028230 182028428 + 0.344532117358383 NA Intergenic Intergenic -8349 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-25 chr6 144670129 144670380 + 0.344532117358383 NA Intergenic B4|SINE|B4 -2614 NR_040519 66760 Mm.233631 NR_040519 ENSMUSG00000085785 Sox5os3 4933425H06Rik SRY (sex determining region Y)-box 5, opposite strand 3 ncRNA common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-6 chr2 60545800 60546086 + 0.344532117358383 NA intron (NM_008867, intron 1 of 29) MER45C|DNA|hAT-Tip100 7365 NM_008867 18779 Mm.5092 NM_008867 ENSMUSG00000054580 Pla2r1 Pla2-r|Pla2g1br|Pla2r phospholipase A2 receptor 1 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-6 chr12 100188129 100188338 + 0.344532117358383 NA non-coding (NR_045282, exon 1 of 3) non-coding (NR_045282, exon 1 of 3) 265 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 - predicted gene 10433 ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383 chr1 66862335 66862553 + 0.344532117358383 NA intron (NM_007381, intron 1 of 10) intron (NM_007381, intron 1 of 10) 865 NM_007381 11363 Mm.2445 NM_007381 ENSMUSG00000026003 Acadl AA960361|AU018452|C79855|LCAD acyl-Coenzyme A dehydrogenase, long-chain protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-2 chr10 80069582 80069914 + 0.344532117358383 NA intron (NM_001359635, intron 6 of 31) intron (NM_001359635, intron 6 of 31) 5691 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-4 chr11 107574365 107574601 + 0.344532117358383 NA intron (NM_198298, intron 2 of 31) intron (NM_198298, intron 2 of 31) 26523 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-21 chr6 94304250 94304511 + 0.344532117358383 NA Intergenic Intergenic -20463 NM_001286785 14924 Mm.217216 NM_010367 ENSMUSG00000045095 Magi1 AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129 membrane associated guanylate kinase, WW and PDZ domain containing 1 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-7 chr12 27494983 27495187 + 0.344532117358383 NA Intergenic Intergenic -152367 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-7 chr16 45364022 45364282 + 0.344532117358383 NA Intergenic Intergenic 44901 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-22 chr9 72837811 72838025 + 0.344532117358383 NA intron (NM_175485, intron 2 of 19) intron (NM_175485, intron 2 of 19) 30644 NM_175485 235472 Mm.31696 NM_175485 ENSMUSG00000036030 Prtg A230098A12Rik|Igdcc5 protogenin protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-15 chr2 84705243 84705438 + 0.344532117358383 NA intron (NM_144887, intron 2 of 11) intron (NM_144887, intron 2 of 11) 9824 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-11 chr5 31616164 31616384 + 0.344532117358383 NA intron (NM_025796, intron 2 of 3) intron (NM_025796, intron 2 of 3) 2323 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-6 chr15 81587835 81588076 + 0.344532117358383 NA intron (NM_177821, intron 1 of 30) intron (NM_177821, intron 1 of 30) 1741 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-7 chr14 25536526 25536755 + 0.344532117358383 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) 2201 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-5 chr11 95075045 95075245 + 0.344532117358383 NA intron (NM_013565, intron 1 of 25) intron (NM_013565, intron 1 of 25) 1569 NM_013565 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-9 chr15 39822369 39822656 + 0.344532117358383 NA intron (NM_001164466, intron 7 of 9) intron (NM_001164466, intron 7 of 9) 25467 NR_045788 100503072 Mm.446661 NR_045788 ENSMUSG00000087695 Gm16291 - predicted gene 16291 ncRNA common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-7 chr13 75791396 75791606 + 0.344532117358383 NA Intergenic Intergenic -48384 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-19 chr5 29772949 29773139 + 0.344532117358383 NA intron (NM_001359198, intron 8 of 8) intron (NM_001359198, intron 8 of 8) -37108 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-26 chr7 45464029 45464335 + 0.344532117358383 NA intron (NM_007527, intron 4 of 5) ID|SINE|ID 2716 NM_007527 12028 Mm.19904 NM_007527 ENSMUSG00000003873 Bax - BCL2-associated X protein protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-20 chr5 107082440 107082634 + 0.344532117358383 NA Intergenic Intergenic 117976 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-12 chr17 28348418 28348617 + 0.344532117358383 NA intron (NM_011566, intron 1 of 12) intron (NM_011566, intron 1 of 12) 1829 NM_001204156 21678 Mm.6655 NM_011566 ENSMUSG00000002249 Tead3 DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2 TEA domain family member 3 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383 chr10 6848545 6848773 + 0.344532117358383 NA intron (NM_001302796, intron 3 of 4) intron (NM_001302796, intron 3 of 4) 60083 NM_001039652 18390 Mm.438000 NM_011013 ENSMUSG00000000766 Oprm1 M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR opioid receptor, mu 1 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-6 chr11 100520450 100520779 + 0.344532117358383 NA intron (NM_134037, intron 3 of 27) RSINE1|SINE|B4 7386 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-18 chr5 104395282 104395520 + 0.344532117358383 NA Intergenic Intergenic -39710 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-2 chr1 153192443 153192660 + 0.344532117358383 NA Intergenic Intergenic -6104 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-16 chr3 116662989 116663269 + 0.344532117358383 NA promoter-TSS (NM_008246) promoter-TSS (NM_008246) -452 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-4 chr17 24668797 24669046 + 0.344532117358383 NA promoter-TSS (NM_183149) promoter-TSS (NM_183149) -766 NM_001348231 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-3 chr13 91164920 91165122 + 0.344532117358383 NA intron (NM_025770, intron 2 of 7) intron (NM_025770, intron 2 of 7) 58966 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-17 chr4 89446903 89447189 + 0.344532117358383 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -136014 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-21 chr9 72713957 72714159 + 0.344532117358383 NA intron (NM_010890, intron 9 of 28) intron (NM_010890, intron 9 of 28) 20760 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-9 chr2 137431326 137431565 + 0.344532117358383 NA Intergenic Intergenic -314925 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-6 chr13 37783961 37784175 + 0.344532117358383 NA Intergenic Intergenic -41970 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-2 chr1 186703494 186703684 + 0.344532117358383 NA intron (NM_001329107, intron 1 of 7) intron (NM_001329107, intron 1 of 7) 2400 NM_009367 21808 Mm.18213 NM_009367 ENSMUSG00000039239 Tgfb2 BB105277|Tgf-beta2|Tgfb-2 transforming growth factor, beta 2 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-8 chr12 69437328 69437543 + 0.344532117358383 NA Intergenic Intergenic 38115 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-4 chr11 70716390 70716643 + 0.344532117358383 NA intron (NM_153103, intron 16 of 22) intron (NM_153103, intron 16 of 22) 10526 NR_105890 102465557 NR_105890 ENSMUSG00000105932 Mir6925 mmu-mir-6925 microRNA 6925 ncRNA common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383 chr1 23204176 23204433 + 0.344532117358383 NA Intergenic Intergenic -67965 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-8 chr3 121890849 121891078 + 0.344532117358383 NA Intergenic Intergenic -62266 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-4 chr10 128094389 128094579 + 0.344532117358383 NA intron (NM_054078, intron 1 of 29) intron (NM_054078, intron 1 of 29) 1701 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-23 chr6 38810100 38810291 + 0.344532117358383 NA intron (NM_010433, intron 2 of 14) intron (NM_010433, intron 2 of 14) 27116 NM_001136065 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-17 chr3 144994230 144994449 + 0.344532117358383 NA Intergenic Intergenic -19294 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-3 chr13 67060907 67061133 + 0.344532117358383 NA intron (NM_001166218, intron 1 of 3) CpG 150 NM_001166218 78251 Mm.297247 NM_001166218 ENSMUSG00000090641 Zfp712 4921504N20Rik|mszf31|mszf89 zinc finger protein 712 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-2 chr11 35066495 35066750 + 0.344532117358383 NA Intergenic Intergenic -54834 NM_011412 20564 Mm.478604 NM_011412 ENSMUSG00000056427 Slit3 Slil2|Slit1|b2b2362.1Clo slit guidance ligand 3 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-5 chr10 97392709 97392984 + 0.344532117358383 NA Intergenic Intergenic -30632 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-27 chr9 57972025 57972243 + 0.344532117358383 NA Intergenic ID4|SINE|ID -25890 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-9 chr2 168457639 168457926 + 0.344532117358383 NA Intergenic Intergenic 132583 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-5 chr17 78389552 78389746 + 0.344532117358383 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 28503 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-14 chr3 105050997 105051207 + 0.344532117358383 NA intron (NM_030249, intron 1 of 5) intron (NM_030249, intron 1 of 5) 1851 NM_001163332 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-2 chr10 93189923 93190129 + 0.344532117358383 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 27241 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-14 chr7 51341871 51342089 + 0.344532117358383 NA Intergenic Intergenic -169049 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-3 chr10 4272704 4272907 + 0.344532117358383 NA intron (NM_031185, intron 1 of 3) B1_Mus2|SINE|Alu 6476 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-20 chr6 88921342 88921783 + 0.344532117358383 NA Intergenic IMPB_01|Satellite|Satellite 19311 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-4 chr16 11028673 11028884 + 0.344532117358383 NA Intergenic Intergenic 19880 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-5 chr12 51692761 51693008 + 0.344532117358383 NA promoter-TSS (NM_052973) promoter-TSS (NM_052973) -970 NM_052973 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-15 chr4 43555959 43556235 + 0.344532117358383 NA intron (NM_011602, intron 3 of 56) intron (NM_011602, intron 3 of 56) 6486 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-8 chr16 45371512 45371742 + 0.344532117358383 NA Intergenic Intergenic 37426 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-7 chr3 108781375 108781577 + 0.344532117358383 NA intron (NM_177859, intron 11 of 11) intron (NM_177859, intron 11 of 11) 41818 NM_177859 329738 Mm.72322 NM_177859 ENSMUSG00000049565 Aknad1 4921525H12Rik AKNA domain containing 1 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-3 chr10 80928881 80929098 + 0.344532117358383 NA Intergenic MIRc|SINE|MIR -1102 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-29 chr9 64701444 64701633 + 0.344532117358383 NA TTS (NM_172522) TTS (NM_172522) 36218 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-11 chr17 23739941 23740173 + 0.344532117358383 NA 5' UTR (NM_023824, exon 1 of 3) 5' UTR (NM_023824, exon 1 of 3) 273 NM_023824 76498 Mm.491253 NM_023824 ENSMUSG00000023909 Paqr4 1500004C10Rik progestin and adipoQ receptor family member IV protein-coding common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-4 chr17 23749520 23749723 + 0.344532117358383 NA non-coding (NR_015472, exon 1 of 3) non-coding (NR_015472, exon 1 of 3) 385 NR_015472 638247 Mm.382600 NR_015472 ENSMUSG00000097006 9530082P21Rik E030034P13Rik RIKEN cDNA 9530082P21 gene ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-4 chr10 24494850 24495084 + 0.344532117358383 NA Intergenic Intergenic -100475 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383 chr1 135466533 135466858 + 0.344532117358383 NA intron (NM_173437, intron 9 of 28) L3b|LINE|CR1 -12012 NR_049188 100885827 NR_049188 ENSMUSG00000093515 Mir1231 Gm23720|mir-1231|mmu-mir-1231 microRNA 1231 ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-10 chr19 27167691 27167896 + 0.344532117358383 NA Intergenic Intergenic -48691 NM_001347441 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-5 chr13 73765127 73765314 + 0.344532117358383 NA intron (NM_001360694, intron 1 of 24) intron (NM_001360694, intron 1 of 24) 1523 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-24 chr6 114934755 114934956 + 0.344532117358383 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -13034 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-18 chr4 119239008 119239253 + 0.344532117358383 NA intron (NM_019782, intron 5 of 15) intron (NM_019782, intron 5 of 15) 5301 NM_001042411 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-4 chr11 98741800 98742022 + 0.344532117358383 NA 5' UTR (NM_001313983, exon 1 of 10) 5' UTR (NM_001313983, exon 1 of 10) 126 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383 chr10 16958723 16958994 + 0.344532117358383 NA intron (NR_038020, intron 6 of 8) intron (NR_038020, intron 6 of 8) 136924 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-3 chr1 194941858 194942103 + 0.344532117358383 NA intron (NM_001111059, intron 1 of 7) intron (NM_001111059, intron 1 of 7) 3159 NM_133654 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-11 chr18 35383371 35383602 + 0.344532117358383 NA intron (NM_001360814, intron 3 of 9) intron (NM_001360814, intron 3 of 9) 86466 NM_001360814 81500 Mm.291482 NM_030749 ENSMUSG00000024357 Sil1 1810057E01Rik|AI042831|wz endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-13 chr17 73391928 73392176 + 0.344532117358383 NA intron (NM_001033444, intron 1 of 22) intron (NM_001033444, intron 1 of 22) 7244 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-19 chr6 145972485 145972707 + 0.344532117358383 NA Intergenic Intergenic 38474 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-21 chr5 144360181 144360421 + 0.344532117358383 NA intron (NR_102372, intron 1 of 1) intron (NR_102372, intron 1 of 1) 1776 NR_102373 100579137 NR_102372 ENSMUSG00000104600 Dmrt1i Dmr Dmrt1 interacting ncRNA ncRNA common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383 chr1 23204211 23204444 + 0.344532117358383 NA Intergenic Intergenic -67942 NR_029533 387225 NR_029533 ENSMUSG00000065405 Mir30a Mirn30a|mir-30a|mmu-mir-30a microRNA 30a ncRNA common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-10 chr16 85141153 85141513 + 0.344532117358383 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 32374 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-6 chr3 90585388 90585592 + 0.344532117358383 NA intron (NM_001355597, intron 1 of 2) intron (NM_001355597, intron 1 of 2) 831 NM_001355597 20197 Mm.440044 NM_011310 ENSMUSG00000001021 S100a3 S100E S100 calcium binding protein A3 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-16 chr4 132463177 132463382 + 0.344532117358383 NA intron (NM_026039, intron 1 of 2) intron (NM_026039, intron 1 of 2) 642 NM_026039 67219 Mm.45929 NM_026039 ENSMUSG00000066042 Med18 2810046C01Rik mediator complex subunit 18 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-28 chr9 102671510 102671729 + 0.344532117358383 NA Intergenic Intergenic 45323 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-10 chr2 164074985 164075215 + 0.344532117358383 NA intron (NM_021420, intron 1 of 10) intron (NM_021420, intron 1 of 10) 922 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-12 chr4 137486165 137486381 + 0.344532117358383 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 17470 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-20 chr8 109780100 109780324 + 0.344532117358383 NA intron (NM_001301211, intron 1 of 22) intron (NM_001301211, intron 1 of 22) 1629 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-2 chr1 162247255 162247507 + 0.344532117358383 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 24013 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-12 chr19 16328161 16328362 + 0.344532117358383 NA intron (NM_008139, intron 3 of 6) intron (NM_008139, intron 3 of 6) -13257 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-12 chr2 118180649 118180912 + 0.344532117358383 NA Intergenic Intergenic 68904 NM_001313914 21825 Mm.4159 NM_011580 ENSMUSG00000040152 Thbs1 TSP-1|TSP1|Thbs-1|tbsp1 thrombospondin 1 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-17 chrX 7261011 7261201 + 0.344532117358383 NA intron (NM_001243762, intron 2 of 13) intron (NM_001243762, intron 2 of 13) -12609 NR_030242 751544 NR_030242 ENSMUSG00000070139 Mir532 Mirn532|mir-532|mmu-mir-532 microRNA 532 ncRNA unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-2 chr1 131095690 131095994 + 0.344532117358383 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 2001 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-13 chr19 18833675 18833932 + 0.344532117358383 NA intron (NM_153417, intron 24 of 38) intron (NM_153417, intron 24 of 38) 83820 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-13 chr6 127446332 127446624 + 0.344532117358383 NA promoter-TSS (NM_001346513) promoter-TSS (NM_001346513) -362 NM_001346513 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-9 chr4 64020492 64020727 + 0.344532117358383 NA 5' UTR (NM_011607, exon 2 of 26) 5' UTR (NM_011607, exon 2 of 26) 26406 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-22 chr6 17547338 17547535 + 0.344532117358383 NA intron (NM_008591, intron 13 of 21) intron (NM_008591, intron 13 of 21) 83479 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-25 chr9 7678475 7678758 + 0.344532117358383 NA intron (NR_126562, intron 1 of 3) intron (NR_126562, intron 1 of 3) -13474 NM_010810 17393 Mm.4825 NM_010810 ENSMUSG00000018623 Mmp7 MAT|MMP-7 matrix metallopeptidase 7 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-7 chr19 55441596 55441857 + 0.344532117358383 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 125669 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-3 chr11 103099297 103099564 + 0.344532117358383 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 2228 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-6 chr13 70791943 70792218 + 0.344532117358383 NA intron (NM_172053, intron 7 of 22) intron (NM_172053, intron 7 of 22) 49731 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-13 chr3 54421050 54421362 + 0.344532117358383 NA Intergenic Intergenic 60099 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-5 chr18 41887783 41888028 + 0.344532117358383 NA intron (NM_029942, intron 5 of 6) intron (NM_029942, intron 5 of 6) 63289 NM_029942 77619 Mm.30649 NM_029942 ENSMUSG00000056671 Prelid2 1700003A01Rik|C330008K14Rik PRELI domain containing 2 protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-15 chr3 109154897 109155107 + 0.344532117358383 NA exon (NM_172685, exon 4 of 10) exon (NM_172685, exon 4 of 10) 31853 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-14 chr4 19526211 19526421 + 0.344532117358383 NA exon (NM_001356481, exon 15 of 17) exon (NM_001356481, exon 15 of 17) 43792 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383 chr1 179668716 179668959 + 0.344532117358383 NA intron (NM_178653, intron 1 of 11) intron (NM_178653, intron 1 of 11) 606 NM_178653 109232 Mm.136458 NM_178653 ENSMUSG00000038936 Sccpdh AW214504|C330023F11Rik saccharopine dehydrogenase (putative) protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-10 chr17 45881784 45882003 + 0.344532117358383 NA promoter-TSS (NR_152136) promoter-TSS (NR_152136) -441 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-8 chr2 30996640 30996890 + 0.344532117358383 NA intron (NM_028846, intron 2 of 24) intron (NM_028846, intron 2 of 24) 14486 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-7 chr7 19004885 19005075 + 0.344532117358383 NA exon (NM_178757, exon 1 of 1) exon (NM_178757, exon 1 of 1) 915 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-11 chr2 51450472 51450672 + 0.344532117358383 NA Intergenic Intergenic -12672 NR_130155 73375 Mm.396227 NR_130155 ENSMUSG00000086007 1700057H21Rik - RIKEN cDNA 1700057H21 gene ncRNA unique_peak1_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-3 chr10 23479406 23479776 + 0.344532117358383 NA Intergenic Intergenic -129648 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-11 chr2 181525141 181525424 + 0.344532117358383 NA intron (NM_001271584, intron 2 of 5) B1_Mur3|SINE|Alu 4797 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-22 chr7 52593445 52593739 + 0.344532117358383 NA Intergenic Intergenic -577876 NM_001195601 100503036 Mm.279725 NM_001195601 ENSMUSG00000094445 1700015G11Rik Ccdc179 RIKEN cDNA 1700015G11 gene protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-27 chr7 80824224 80824445 + 0.344532117358383 NA Intergenic Intergenic -21003 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-2 chr1 162547789 162548106 + 0.344532117358383 NA intron (NM_144877, intron 1 of 7) intron (NM_144877, intron 1 of 7) 398 NM_144877 71449 Mm.270569 NM_144877 ENSMUSG00000026694 Mettl13 5630401D24Rik methyltransferase like 13 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-17 chr5 33338567 33338942 + 0.344532117358383 NA intron (NM_021500, intron 1 of 8) intron (NM_021500, intron 1 of 8) 3182 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-9 chr17 29488496 29488757 + 0.344532117358383 NA Intergenic Intergenic -2419 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-16 chr9 44334840 44335041 + 0.344532117358383 NA exon (NM_010436, exon 1 of 1) exon (NM_010436, exon 1 of 1) 225 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding common_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-9 chr15 80763274 80763484 + 0.344532117358383 NA intron (NM_144812, intron 3 of 24) RSINE1|SINE|B4 -35231 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-26 chr9 48985838 48986079 + 0.344532117358383 NA intron (NM_001359739, intron 1 of 24) intron (NM_001359739, intron 1 of 24) 573 NM_175482 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding unique_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-30 chr9 111439162 111439362 + 0.344532117358383 NA 5' UTR (NM_172928, exon 1 of 5) 5' UTR (NM_172928, exon 1 of 5) 181 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak1_12_9_0.110665059140996_3.37726062445786_0.344532117358383-10 chr2 173789446 173789754 + 0.344532117358383 NA Intergenic Intergenic 52029 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding unique_peak2_12_9_0.110665059140996_3.37726062445786_0.344532117358383-10 chr6 145856490 145856731 + 0.344532117358383 NA Intergenic Intergenic 8810 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding unique_peak2_10_11_-0.391677138977607_3.38912393123235_0.344532117358383-23 chr7 141164331 141164542 + 0.344532117358383 NA intron (NM_001172100, intron 3 of 9) intron (NM_001172100, intron 3 of 9) 4250 NM_001172101 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-2 chr16 91491927 91492307 + 0.344491671143527 NA intron (NM_010508, intron 2 of 10) intron (NM_010508, intron 2 of 10) 6902 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-17 chr8 122167207 122167439 + 0.344491671143527 NA Intergenic Intergenic -114818 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-4 chr5 101861853 101862563 + 0.344491671143527 NA intron (NM_172882, intron 52 of 66) intron (NM_172882, intron 52 of 66) 97078 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-14 chr7 126776443 126776750 + 0.344491671143527 NA promoter-TSS (NM_026875) promoter-TSS (NM_026875) -379 NM_026875 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee like 3 protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-9 chr7 139296788 139297338 + 0.344491671143527 NA Intergenic Intergenic 48581 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-3 chr8 69584611 69584970 + 0.344491671143527 NA Intergenic CpG 40385 NM_001045553 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-10 chr4 40777507 40777779 + 0.344491671143527 NA Intergenic Intergenic -19758 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-7 chr15 27322565 27322833 + 0.344491671143527 NA Intergenic Intergenic -143978 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-8 chr4 135855512 135855915 + 0.344491671143527 NA promoter-TSS (NM_010178) promoter-TSS (NM_010178) -358 NM_001284196 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-9 chr18 62015430 62015698 + 0.344491671143527 NA 3' UTR (NM_172628, exon 17 of 17) 3' UTR (NM_172628, exon 17 of 17) 62489 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-2 chr11 8569263 8569662 + 0.344491671143527 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 95073 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-6 chr2 141586968 141587320 + 0.344491671143527 NA intron (NM_001013802, intron 6 of 18) intron (NM_001013802, intron 6 of 18) -915668 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-2 chr11 97806473 97806841 + 0.344491671143527 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 7092 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-2 chr16 33833156 33833452 + 0.344491671143527 NA intron (NM_001145884, intron 1 of 14) intron (NM_001145884, intron 1 of 14) 3639 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-5 chr7 88199507 88199907 + 0.344491671143527 NA Intergenic Intergenic -78378 NM_009982 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-11 chr4 43875624 43876137 + 0.344491671143527 NA intron (NM_016678, intron 1 of 20) intron (NM_016678, intron 1 of 20) 350 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-9 chr9 108560589 108560795 + 0.344491671143527 NA TTS (NM_001114119) TTS (NM_001114119) 191 NM_011830 23918 Mm.6065 NM_011830 ENSMUSG00000062867 Impdh2 IMPD inosine monophosphate dehydrogenase 2 protein-coding unique_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527 chr1 162183843 162184563 + 0.344491671143527 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -33420 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-5 chr13 44729991 44730372 + 0.344491671143527 NA promoter-TSS (NM_001205044) promoter-TSS (NM_001205044) -593 NM_021878 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527 chr10 25296432 25297026 + 0.344491671143527 NA intron (NM_018747, intron 1 of 7) CpG 2434 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-9 chr7 66688948 66689491 + 0.344491671143527 NA promoter-TSS (NM_001191001) promoter-TSS (NM_001191001) 342 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527 chr11 113266812 113267118 + 0.344491671143527 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -57296 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-15 chr6 134671212 134671536 + 0.344491671143527 NA intron (NM_001170479, intron 2 of 3) intron (NM_001170479, intron 2 of 3) 30434 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-13 chr6 17481807 17482381 + 0.344491671143527 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 18137 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527 chr15 59725503 59725902 + 0.344491671143527 NA Intergenic Intergenic 69257 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-4 chr6 35331527 35331804 + 0.344491671143527 NA intron (NR_040526, intron 1 of 2) intron (NR_040526, intron 1 of 2) 819 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-8 chr17 6778481 6778941 + 0.344491671143527 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 4069 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527 chr11 84513206 84513484 + 0.344491671143527 NA exon (NM_019816, exon 1 of 13) exon (NM_019816, exon 1 of 13) 156 NM_019816 56321 Mm.257482 NM_019816 ENSMUSG00000018697 Aatf 4933415H02Rik|5830465M17Rik|Che-1|Trb apoptosis antagonizing transcription factor protein-coding unique_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-5 chr6 30307326 30307671 + 0.344491671143527 NA Intergenic Intergenic -2959 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-4 chr13 36533092 36533400 + 0.344491671143527 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 201231 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-3 chr17 26243782 26244034 + 0.344491671143527 NA intron (NM_001206335, intron 1 of 12) CpG 334 NM_207217 106581 Mm.28844 NM_207217 ENSMUSG00000024187 Fam234a Itfg3 family with sequence similarity 234, member A protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-12 chr4 54980435 54980748 + 0.344491671143527 NA intron (NM_172867, intron 1 of 12) intron (NM_172867, intron 1 of 12) 32646 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-2 chr14 24232810 24233263 + 0.344491671143527 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 12884 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-7 chr6 121087807 121088158 + 0.344491671143527 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -6355 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527 chr10 128525472 128525815 + 0.344491671143527 NA exon (NM_011843, exon 1 of 31) exon (NM_011843, exon 1 of 31) 216 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-13 chr4 136285580 136285900 + 0.344491671143527 NA promoter-TSS (NM_009557) promoter-TSS (NM_009557) -327 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding unique_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-3 chr3 79567185 79567531 + 0.344491671143527 NA promoter-TSS (NR_152118) promoter-TSS (NR_152118) 321 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-8 chr17 13919655 13920094 + 0.344491671143527 NA Intergenic Intergenic -28499 NM_001122977 635895 Mm.388844 NM_001122977 ENSMUSG00000067941 Gm7168 EG635895 predicted gene 7168 protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-8 chr8 31379141 31379623 + 0.344491671143527 NA intron (NR_046272, intron 2 of 3) intron (NR_046272, intron 2 of 3) 11633 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-6 chr8 108797019 108797553 + 0.344491671143527 NA intron (NM_007496, intron 2 of 9) intron (NM_007496, intron 2 of 9) 82642 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-4 chr13 35818475 35818806 + 0.344491671143527 NA intron (NM_009881, intron 5 of 9) intron (NM_009881, intron 5 of 9) 77238 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527 chr11 87737602 87737879 + 0.344491671143527 NA intron (NR_149756, intron 1 of 5) CpG 189 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding unique_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527 chr11 101259888 101260260 + 0.344491671143527 NA promoter-TSS (NM_175638) promoter-TSS (NM_175638) -493 NM_175638 69847 Mm.23656 NM_175638 ENSMUSG00000035112 Wnk4 2010002J11Rik|Pha2b|Prkwnk4 WNK lysine deficient protein kinase 4 protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-6 chr3 37360646 37360939 + 0.344491671143527 NA intron (NM_008006, intron 1 of 2) intron (NM_008006, intron 1 of 2) 12139 NM_008006 14173 Mm.473689 NM_008006 ENSMUSG00000037225 Fgf2 Fgf-2|Fgfb|bFGF fibroblast growth factor 2 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-3 chr11 79737063 79737328 + 0.344491671143527 NA Intergenic Intergenic 10795 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-18 chr9 34986816 34987149 + 0.344491671143527 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -129746 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-5 chr15 36173651 36173956 + 0.344491671143527 NA promoter-TSS (NM_023127) promoter-TSS (NM_023127) -207 NM_023127 17749 Mm.27375 NM_023127 ENSMUSG00000045996 Polr2k ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0 polymerase (RNA) II (DNA directed) polypeptide K protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-2 chr12 80346418 80346858 + 0.344491671143527 NA intron (NM_177267, intron 8 of 8) intron (NM_177267, intron 8 of 8) 45039 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-4 chr7 12478379 12478672 + 0.344491671143527 NA 5' UTR (NM_001039951, exon 1 of 4) 5' UTR (NM_001039951, exon 1 of 4) 220 NM_026112 67370 Mm.98929 NM_026112 ENSMUSG00000030386 Zfp606 2410022M24Rik|AW494727 zinc finger protein 606 protein-coding common_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-6 chrX 101429796 101430205 + 0.344491671143527 NA intron (NM_001252518, intron 1 of 11) intron (NM_001252518, intron 1 of 11) 349 NM_001252518 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-5 chr2 30177998 30178292 + 0.344491671143527 NA intron (NM_172660, intron 1 of 11) intron (NM_172660, intron 1 of 11) 314 NM_172660 227695 Mm.4449 NM_172660 ENSMUSG00000039660 Spout1 9930028P05|AL033358|CENP-32|D2Wsu81e SPOUT domain containing methyltransferase 1 protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-5 chr2 32236228 32236492 + 0.344491671143527 NA promoter-TSS (NM_145145) promoter-TSS (NM_145145) -323 NM_145145 99011 Mm.31192 NM_145145 ENSMUSG00000039254 Pomt1 AI505244 protein-O-mannosyltransferase 1 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-3 chr12 80344301 80344729 + 0.344491671143527 NA intron (NM_177267, intron 8 of 8) intron (NM_177267, intron 8 of 8) 47162 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-5 chr9 102715749 102716187 + 0.344491671143527 NA Intergenic Intergenic -1836 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527 chr12 38779535 38780192 + 0.344491671143527 NA promoter-TSS (NM_007960) promoter-TSS (NM_007960) -219 NM_001347379 14009 Mm.4866 NM_007960 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant 1 protein-coding unique_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-3 chr6 29431074 29431509 + 0.344491671143527 NA Intergenic Intergenic -1862 NM_001081185 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-6 chr15 67177153 67177429 + 0.344491671143527 NA promoter-TSS (NM_009177) promoter-TSS (NM_009177) -409 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-10 chr3 41220206 41220577 + 0.344491671143527 NA Intergenic Intergenic -137345 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding unique_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527 chr6 146935558 146935932 + 0.344491671143527 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 18676 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-6 chr16 23108755 23109249 + 0.344491671143527 NA promoter-TSS (NR_030705) promoter-TSS (NR_030705) 49 NR_030705 100216532 NR_030705 ENSMUSG00000088524 Snord2 - small nucleolar RNA, C/D box 2 snoRNA common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-16 chr7 137001566 137002065 + 0.344491671143527 NA intron (NM_008598, intron 2 of 4) intron (NM_008598, intron 2 of 4) 107204 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-7 chr2 144164679 144165171 + 0.344491671143527 NA Intergenic Intergenic 24365 NR_136884 433481 Mm.330630 NR_136884 ENSMUSG00000074758 Gm5535 EG433481 predicted gene 5535 ncRNA common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-15 chr8 26823642 26824004 + 0.344491671143527 NA intron (NR_045904, intron 1 of 2) intron (NR_045904, intron 1 of 2) 600 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-2 chr5 33377908 33378373 + 0.344491671143527 NA promoter-TSS (NM_001081101) promoter-TSS (NM_001081101) -556 NR_153108 71101 Mm.132178 NM_027674 ENSMUSG00000037355 Uvssa 4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530 UV stimulated scaffold protein A protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-8 chr7 27838390 27838878 + 0.344491671143527 NA promoter-TSS (NM_011762) promoter-TSS (NM_011762) 50 NM_011762 22717 Mm.379046 NM_011762 ENSMUSG00000078779 Zfp59 Mfg-2|Mfg2 zinc finger protein 59 protein-coding unique_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-2 chr4 65243171 65243724 + 0.344491671143527 NA intron (NM_021362, intron 9 of 21) intron (NM_021362, intron 9 of 21) 119273 NM_021362 18491 Mm.317854 NM_021362 ENSMUSG00000028370 Pappa 8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A pregnancy-associated plasma protein A protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-4 chr19 37958883 37959147 + 0.344491671143527 NA intron (NM_001302140, intron 21 of 53) intron (NM_001302140, intron 21 of 53) 84562 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-2 chr12 21543067 21543725 + 0.344491671143527 NA Intergenic CpG -125960 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-6 chr14 73510067 73510502 + 0.344491671143527 NA intron (NM_026119, intron 1 of 6) CpG 235 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-9 chr2 25145939 25146276 + 0.344491671143527 NA Intergenic Intergenic -34651 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-7 chr6 126939806 126940015 + 0.344491671143527 NA promoter-TSS (NM_138594) promoter-TSS (NM_138594) -56 NM_138594 28040 Mm.44228 NM_138594 ENSMUSG00000030347 D6Wsu163e C12orf4 DNA segment, Chr 6, Wayne State University 163, expressed protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-5 chr15 75969273 75969567 + 0.344491671143527 NA intron (NM_001081065, intron 1 of 3) CpG 297 NM_001081065 69020 Mm.294295 NM_001081065 ENSMUSG00000034429 Zfp707 1500031N24Rik|AI451708|AW495315 zinc finger protein 707 protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-16 chr8 126687824 126688222 + 0.344491671143527 NA Intergenic Intergenic -94587 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-4 chr11 98782965 98783411 + 0.344491671143527 NA Intergenic Intergenic -7811 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527 chr10 43489864 43490544 + 0.344491671143527 NA intron (NM_199028, intron 1 of 3) intron (NM_199028, intron 1 of 3) -2435 NM_001359601 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-3 chr15 78428740 78429127 + 0.344491671143527 NA intron (NM_001289671, intron 1 of 7) CpG 369 NR_110357 72844 Mm.390816 NM_001081367 ENSMUSG00000033287 Kctd17 2900008M13Rik|AA414907|AW742389|N28155 potassium channel tetramerisation domain containing 17 protein-coding unique_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527 chr19 53142873 53143240 + 0.344491671143527 NA promoter-TSS (NM_013758) promoter-TSS (NM_013758) 300 NM_001164100 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-19 chr9 103304760 103305073 + 0.344491671143527 NA promoter-TSS (NM_176979) promoter-TSS (NM_176979) -411 NM_176979 235559 Mm.259893 NM_176979 ENSMUSG00000032555 Topbp1 1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259 topoisomerase (DNA) II binding protein 1 protein-coding common_peak1_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-3 chr12 31266363 31266621 + 0.344491671143527 NA intron (NM_008482, intron 1 of 32) intron (NM_008482, intron 1 of 32) 1198 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-12 chr4 144930395 144930688 + 0.344491671143527 NA Intergenic Intergenic 37404 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-14 chr6 81987401 81987932 + 0.344491671143527 NA Intergenic Intergenic -21717 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding common_peak1_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-3 chr2 113818508 113818763 + 0.344491671143527 NA intron (NM_009162, intron 2 of 5) intron (NM_009162, intron 2 of 5) 10456 NM_009162 20394 Mm.4836 NM_009162 ENSMUSG00000023236 Scg5 7B2|AI325031|Sgne-1|Sgne1 secretogranin V protein-coding unique_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-3 chr19 20614741 20615115 + 0.344491671143527 NA intron (NM_013467, intron 2 of 12) intron (NM_013467, intron 2 of 12) 12960 NM_013467 11668 Mm.250866 NM_013467 ENSMUSG00000053279 Aldh1a1 ALDH-E1|ALHDII|Ahd-2|Ahd2|Aldh1|Aldh1a2|E1|Raldh1 aldehyde dehydrogenase family 1, subfamily A1 protein-coding common_peak2_25_24_-0.218318015319611_4.53469718211492_0.344491671143527-4 chr17 46027109 46027646 + 0.344491671143527 NA intron (NM_001025250, intron 2 of 7) intron (NM_001025250, intron 2 of 7) -2214 NM_001110268 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak2_28_21_0.122536382313213_4.5206998097939_0.344491671143527-7 chr16 91688888 91689265 + 0.344491671143527 NA promoter-TSS (NM_021720) promoter-TSS (NM_021720) 178 NR_040389 100038392 Mm.440384 NR_040389 ENSMUSG00000085169 Gm10785 - predicted gene 10785 ncRNA common_peak1_28_21_0.122536382313213_4.5206998097939_0.344491671143527-11 chr4 45455846 45456187 + 0.344491671143527 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -47250 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak2_24_24_-0.274502348049173_4.50660501575014_0.344491671143527-2 chr13 107889677 107889919 + 0.344491671143527 NA exon (NM_145456, exon 1 of 15) exon (NM_145456, exon 1 of 15) 266 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak2_50_38_0.105264240701658_5.33803433921308_0.344477557577616 chr11 77493771 77494580 + 0.344477557577616 NA intron (NM_001004144, intron 1 of 19) intron (NM_001004144, intron 1 of 19) 763 NM_001004144 216963 Mm.290182 NM_001004144 ENSMUSG00000011877 Git1 Cat-1|p95Cat G protein-coupled receptor kinase-interactor 1 protein-coding common_peak1_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-3 chr17 14339572 14340018 + 0.344477557577616 NA intron (NM_022315, intron 4 of 12) intron (NM_022315, intron 4 of 12) 59147 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA common_peak2_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-3 chr15 95371153 95371659 + 0.344477557577616 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 156608 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak1_50_38_0.105264240701658_5.33803433921308_0.344477557577616 chr6 114642881 114643629 + 0.344477557577616 NA intron (NM_028835, intron 1 of 18) CpG 158 NM_001253718 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-6 chrX 52988166 52988776 + 0.344477557577616 NA intron (NM_013556, intron 1 of 8) CpG 393 NM_013556 15452 Mm.299381 NM_013556 ENSMUSG00000025630 Hprt C81579|HPGRT|Hprt1 hypoxanthine guanine phosphoribosyl transferase protein-coding common_peak1_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-5 chr8 3279112 3279535 + 0.344477557577616 NA 5' UTR (NM_010568, exon 1 of 21) 5' UTR (NM_010568, exon 1 of 21) 294 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding common_peak2_45_42_-0.183411452905843_5.33455902824918_0.344477557577616 chr1 82832229 82832738 + 0.344477557577616 NA Intergenic Intergenic -6977 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_50_38_0.105264240701658_5.33803433921308_0.344477557577616-2 chr8 106528333 106528998 + 0.344477557577616 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 17813 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak2_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-2 chr11 87086200 87086792 + 0.344477557577616 NA exon (NM_024262, exon 1 of 4) exon (NM_024262, exon 1 of 4) 281 NM_024262 74133 Mm.23257 NM_024262 ENSMUSG00000020495 Smg8 1200011M11Rik smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_50_38_0.105264240701658_5.33803433921308_0.344477557577616-3 chr9 108560428 108561121 + 0.344477557577616 NA TTS (NM_001114119) TTS (NM_001114119) 273 NM_011830 23918 Mm.6065 NM_011830 ENSMUSG00000062867 Impdh2 IMPD inosine monophosphate dehydrogenase 2 protein-coding common_peak1_45_42_-0.183411452905843_5.33455902824918_0.344477557577616 chr10 111600283 111600935 + 0.344477557577616 NA Intergenic Intergenic -6336 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_50_38_0.105264240701658_5.33803433921308_0.344477557577616-4 chr9 109058929 109059532 + 0.344477557577616 NA promoter-TSS (NM_001012236) promoter-TSS (NM_001012236) 21 NM_001012236 22040 Mm.439964 NM_011637 ENSMUSG00000049734 Trex1 AU041952 three prime repair exonuclease 1 protein-coding common_peak1_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-4 chr2 59611518 59611899 + 0.344477557577616 NA promoter-TSS (NM_198294) promoter-TSS (NM_198294) -334 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak2_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-4 chr8 75093759 75094181 + 0.344477557577616 NA intron (NM_010442, intron 1 of 4) intron (NM_010442, intron 1 of 4) 352 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak1_45_42_-0.183411452905843_5.33455902824918_0.344477557577616-2 chr15 83443971 83444639 + 0.344477557577616 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 3575 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_78_60_0.0868303287123897_5.97415250191908_0.344471032458758 chr4 59373488 59374375 + 0.344471032458758 NA intron (NM_001163288, intron 8 of 16) intron (NM_001163288, intron 8 of 16) 64702 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_78_60_0.0868303287123897_5.97415250191908_0.344471032458758-2 chr4 108459402 108460431 + 0.344471032458758 NA intron (NM_175472, intron 1 of 30) CpG 490 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_78_60_0.0868303287123897_5.97415250191908_0.344471032458758-3 chr8 11400679 11401470 + 0.344471032458758 NA intron (NM_009932, intron 6 of 47) intron (NM_009932, intron 6 of 47) -76855 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_78_60_0.0868303287123897_5.97415250191908_0.344471032458758 chr7 44997716 44998850 + 0.344471032458758 NA promoter-TSS (NM_029410) promoter-TSS (NM_029410) 635 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding common_peak1_72_65_-0.139978683792527_5.97440477746219_0.344471032458745 chr11 23305766 23306356 + 0.344471032458745 NA promoter-TSS (NM_001190401) promoter-TSS (NM_001190401) -834 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak2_113_87_0.0835124585620592_6.50118784791833_0.344467489921293 chr1 52232000 52233159 + 0.344467489921293 NA intron (NM_001081081, intron 1 of 17) CpG 653 NM_001081081 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak2_105_93_-0.115873775981021_6.49665196368713_0.344467489921244 chr14 31963138 31964579 + 0.344467489921244 NA Intergenic Intergenic -65245 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding common_peak2_105_93_-0.115873775981021_6.49665196368713_0.344467489921244-2 chr19 6135891 6136464 + 0.344467489921244 NA intron (NM_019722, intron 3 of 4) intron (NM_019722, intron 3 of 4) 4960 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak1_153_119_0.0668888769894265_6.94033503410323_0.344465354552964 chr12 70974635 70975513 + 0.344465354552964 NA intron (NM_011184, intron 1 of 10) CpG 451 NM_011184 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_145_126_-0.0913242307794828_6.94302257138242_0.344465354552964-2 chr13 41660705 41662440 + 0.344465354552964 NA Intergenic Intergenic 55356 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_145_126_-0.0913242307794828_6.94302257138242_0.344465354552964-3 chr17 70746372 70747841 + 0.344465354552964 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 99671 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_145_126_-0.0913242307794828_6.94302257138242_0.344465354552964 chr10 77150060 77151665 + 0.344465354552964 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 15668 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_200_156_0.0607128914029715_7.32497719459311_0.344463968886603 chr8 120562966 120564812 + 0.344463968886603 NA intron (NM_001145896, intron 3 of 15) intron (NM_001145896, intron 3 of 15) 25186 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak2_301_255_-0.0614570753162056_7.9692714623419_0.344462339614202 chr11 83851073 83854110 + 0.344462339614202 NA promoter-TSS (NM_001291269) promoter-TSS (NM_001291269) -369 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_202_157_0.0657363432010492_7.33664891977763_0.344194136952484 chr3 138143248 138144920 + 0.344194136952484 NA promoter-TSS (NM_001163457) promoter-TSS (NM_001163457) 285 NM_001348197 108943 Mm.471692 NM_175389 ENSMUSG00000004127 Trmt10a 3110023L08Rik|AA794508|Rg9mtd2|Rnmtd2 tRNA methyltransferase 10A protein-coding common_peak1_146_127_-0.0928612339797352_6.95356938301013_0.344113556651347-2 chr2 113440929 113442217 + 0.344113556651347 NA exon (NM_001285459, exon 1 of 17) exon (NM_001285459, exon 1 of 17) 509 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_146_127_-0.0928612339797352_6.95356938301013_0.344113556651347 chr12 112673079 112674738 + 0.344113556651347 NA intron (NM_001331107, intron 1 of 13) CpG 368 NM_001165894 11651 Mm.6645 NM_009652 ENSMUSG00000001729 Akt1 Akt|LTR-akt|PKB|PKB/Akt|PKBalpha|Rac thymoma viral proto-oncogene 1 protein-coding common_peak1_107_94_-0.104363737004033_6.51767373982893_0.34398998081151 chr8 23207577 23208338 + 0.34398998081151 NA intron (NM_018743, intron 1 of 12) CpG 496 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding common_peak2_106_94_-0.117689571301789_6.51101082268005_0.34398998081151 chr1 82597526 82598546 + 0.34398998081151 NA intron (NM_007734, intron 1 of 51) MLT1A0|LTR|ERVL-MaLR 11115 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_106_94_-0.117689571301789_6.51101082268005_0.34398998081151-2 chr15 79074973 79076017 + 0.34398998081151 NA intron (NM_145139, intron 1 of 12) intron (NM_145139, intron 1 of 12) 272 NM_145139 223691 Mm.206404 NM_145139 ENSMUSG00000033047 Eif3l 0610011H21Rik|D15N1e|Eif3eip|Eif3ip|Eif3s6ip|HSP-66Y|PAF67 eukaryotic translation initiation factor 3, subunit L protein-coding common_peak2_107_94_-0.104363737004033_6.51767373982893_0.34398998081151 chr12 55302390 55303591 + 0.34398998081151 NA promoter-TSS (NM_021529) promoter-TSS (NM_021529) 10 NM_021529 59032 Mm.427307 NM_021529 ENSMUSG00000021022 Ppp2r3c 4930511A21Rik|5730412A08Rik|G4-1|G5pr protein phosphatase 2, regulatory subunit B'', gamma protein-coding common_peak2_106_94_-0.117689571301789_6.51101082268005_0.34398998081151-3 chr16 48993057 48993945 + 0.34398998081151 NA promoter-TSS (NM_172616) promoter-TSS (NM_172616) 611 NM_027341 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak1_114_88_0.079721790010491_6.51559432597164_0.343989980811485 chr14 79480325 79481471 + 0.343989980811485 NA promoter-TSS (NM_007920) promoter-TSS (NM_007920) -296 NM_007920 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_193_166_-0.079148717636218_7.34412993365594_0.34392763729949 chr8 36820856 36822274 + 0.34392763729949 NA intron (NM_001194940, intron 4 of 17) intron (NM_001194940, intron 4 of 17) -88511 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_80_61_0.0991861427407388_6.00378938175724_0.34378656500321 chr12 108391319 108392323 + 0.34378656500321 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -18812 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_80_61_0.0991861427407388_6.00378938175724_0.34378656500321-2 chr8 94601219 94601627 + 0.34378656500321 NA promoter-TSS (NM_026274) promoter-TSS (NM_026274) 303 NM_028221 102122 Mm.250425 NM_028221 ENSMUSG00000031774 Fam192a 1700001O11Rik|2310065K24Rik|AI596259|Nip30 family with sequence similarity 192, member A protein-coding common_peak2_80_61_0.0991861427407388_6.00378938175724_0.34378656500321 chr15 36609297 36610020 + 0.34378656500321 NA promoter-TSS (NM_008774) promoter-TSS (NM_008774) -685 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_80_61_0.0991861427407388_6.00378938175724_0.34378656500321-3 chr9 106159863 106160446 + 0.34378656500321 NA Intergenic Intergenic -2016 NM_174846 235582 Mm.335420 NM_174846 ENSMUSG00000020258 Glyctk 6230410P16Rik|C430006L12 glycerate kinase protein-coding common_peak1_79_61_0.0813906734383112_5.99489164710603_0.34378656500321-2 chr17 26508669 26509638 + 0.34378656500321 NA promoter-TSS (NM_013642) promoter-TSS (NM_013642) -681 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_80_61_0.0991861427407388_6.00378938175724_0.34378656500321-3 chr5 114650705 114651972 + 0.34378656500321 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 7083 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_79_61_0.0813906734383112_5.99489164710603_0.34378656500321 chr13 63231321 63232567 + 0.34378656500321 NA intron (NM_001289926, intron 11 of 15) intron (NM_001289926, intron 11 of 15) -8085 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_79_61_0.0813906734383112_5.99489164710603_0.34378656500321 chr6 129229578 129230642 + 0.34378656500321 NA Intergenic Intergenic 7935 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_80_61_0.0991861427407388_6.00378938175724_0.34378656500321-2 chr2 156143864 156144740 + 0.34378656500321 NA promoter-TSS (NM_010911) promoter-TSS (NM_010911) 69 NM_025946 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding common_peak2_73_66_-0.142183428973574_5.99499747597098_0.343786565003198 chr1 74248682 74249448 + 0.343786565003198 NA intron (NM_001357387, intron 4 of 10) intron (NM_001357387, intron 4 of 10) 12548 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_73_66_-0.142183428973574_5.99499747597098_0.343786565003198-2 chr7 27258874 27259776 + 0.343786565003198 NA intron (NM_010950, intron 1 of 9) intron (NM_010950, intron 1 of 9) 564 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding common_peak1_73_66_-0.142183428973574_5.99499747597098_0.343786565003198 chr2 163418543 163419487 + 0.343786565003198 NA promoter-TSS (NR_151490) promoter-TSS (NR_151490) 455 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding common_peak1_73_66_-0.142183428973574_5.99499747597098_0.343786565003198-2 chr7 79348703 79349750 + 0.343786565003198 NA intron (NM_018811, intron 6 of 10) RSINE1|SINE|B4 37801 NM_020599 19771 Mm.41653 NM_020599 ENSMUSG00000039194 Rlbp1 3110056M11Rik|CRALBP retinaldehyde binding protein 1 protein-coding common_peak1_156_121_0.0706799734615196_6.96607732429365_0.343767412374598 chr8 13668650 13670394 + 0.343767412374598 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 8065 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_147_128_-0.0943764735123001_6.9640390186671_0.343767412374598 chr16 97850403 97852138 + 0.343767412374598 NA promoter-TSS (NM_144789) promoter-TSS (NM_144789) -43 NM_144789 114604 Mm.328741 NM_144789 ENSMUSG00000014039 Prdm15 C21orf83|E130018M06Rik|ORF62|Zfp298 PR domain containing 15 protein-coding common_peak1_194_167_-0.080396706488802_7.35211906953436_0.343664408571906 chr10 80073041 80075278 + 0.343664408571906 NA intron (NM_001359635, intron 4 of 31) intron (NM_001359635, intron 4 of 31) 1280 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_319_250_0.0499334707279253_7.99651028931473_0.343610614768912 chr15 79545388 79547346 + 0.343610614768912 NA 5' UTR (NM_199080, exon 1 of 13) 5' UTR (NM_199080, exon 1 of 13) 192 NM_199079 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak2_108_95_-0.10626761559271_6.5318286929248_0.343522857919551 chr15 27466709 27467578 + 0.343522857919551 NA intron (NM_020332, intron 1 of 11) CpG 466 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_108_95_-0.10626761559271_6.5318286929248_0.343522857919551-2 chr9 63719013 63720474 + 0.343522857919551 NA intron (NM_016769, intron 1 of 8) MIRc|SINE|MIR 38251 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_115_89_0.076004945474347_6.52985556906685_0.343522857919527 chr13 55321583 55322569 + 0.343522857919527 NA promoter-TSS (NM_025596) promoter-TSS (NM_025596) 21 NM_025596 66494 Mm.439805 NM_025596 ENSMUSG00000021486 Prelid1 2610524G07Rik|Preli PRELI domain containing 1 protein-coding common_peak2_115_89_0.076004945474347_6.52985556906685_0.343522857919527-2 chrX 96134045 96135308 + 0.343522857919527 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 38631 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348 chr1 91801913 91802690 + 0.343417008601348 NA intron (NM_007855, intron 1 of 1) CpG 840 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348 chr11 5902900 5903655 + 0.343417008601348 NA intron (NM_001287386, intron 7 of 9) intron (NM_001287386, intron 7 of 9) -4495 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding common_peak1_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-2 chr2 9482243 9482922 + 0.343417008601348 NA Intergenic Intergenic 293067 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-8 chr7 109703708 109704304 + 0.343417008601348 NA exon (NM_020616, exon 2 of 6) exon (NM_020616, exon 2 of 6) 269 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding common_peak2_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-3 chr19 11770344 11770810 + 0.343417008601348 NA intron (NM_025606, intron 1 of 3) intron (NM_025606, intron 1 of 3) 162 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding unique_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-2 chr19 9061511 9062001 + 0.343417008601348 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 26200 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-7 chr2 125247504 125248222 + 0.343417008601348 NA exon (NM_001159646, exon 2 of 7) exon (NM_001159646, exon 2 of 7) 348 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak2_51_39_0.0965550999945064_5.37020564488462_0.343417008601348 chr12 70892028 70892632 + 0.343417008601348 NA intron (NM_028127, intron 10 of 13) intron (NM_028127, intron 10 of 13) -45527 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-3 chr16 49854961 49855587 + 0.343417008601348 NA promoter-TSS (NM_010581) promoter-TSS (NM_010581) -380 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-4 chr19 46962289 46962726 + 0.343417008601348 NA promoter-TSS (NR_028353) promoter-TSS (NR_028353) -156 NR_028353 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-8 chr2 148731181 148732288 + 0.343417008601348 NA intron (NM_019632, intron 1 of 10) intron (NM_019632, intron 1 of 10) 686 NM_019632 17957 Mm.274308 NM_019632 ENSMUSG00000027438 Napb Brp14|E161|I47|SNARE|b-SNAP N-ethylmaleimide sensitive fusion protein attachment protein beta protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-3 chr11 86544009 86544725 + 0.343417008601348 NA promoter-TSS (NM_001199047) promoter-TSS (NM_001199047) 440 NM_028259 72508 Mm.394280 NM_028259 ENSMUSG00000020516 Rps6kb1 2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|P70S6K1|S6K|S6K1|p70/85s6k|p70s6k ribosomal protein S6 kinase, polypeptide 1 protein-coding unique_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348 chr17 46781874 46782608 + 0.343417008601348 NA intron (NM_025433, intron 1 of 6) intron (NM_025433, intron 1 of 6) 415 NM_025433 66229 Mm.218533 NM_025433 ENSMUSG00000063888 Rpl7l1 1500016H10Rik ribosomal protein L7-like 1 protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-2 chr13 102646666 102647197 + 0.343417008601348 NA Intergenic Intergenic -46616 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding common_peak2_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-5 chr5 124351604 124352236 + 0.343417008601348 NA intron (NM_013812, intron 1 of 3) intron (NM_013812, intron 1 of 3) 2708 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-5 chr16 94526797 94527334 + 0.343417008601348 NA promoter-TSS (NM_007834) promoter-TSS (NM_007834) -436 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra DSCR3 arrestin fold containing protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-6 chr6 142361542 142361935 + 0.343417008601348 NA 3' UTR (NM_023042, exon 15 of 15) 3' UTR (NM_023042, exon 15 of 15) 16041 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-2 chr16 32246842 32247536 + 0.343417008601348 NA promoter-TSS (NM_173439) promoter-TSS (NM_173439) -38 NM_001185162 68980 Mm.159860 NM_026898 ENSMUSG00000022787 Wdr53 1500002B03Rik|AI848860 WD repeat domain 53 protein-coding common_peak1_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-5 chr9 67077595 67077881 + 0.343417008601348 NA Intergenic Intergenic -24562 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-9 chr9 54638283 54639111 + 0.343417008601348 NA intron (NM_053178, intron 2 of 13) intron (NM_053178, intron 2 of 13) 23188 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-5 chr3 41083504 41083996 + 0.343417008601348 NA promoter-TSS (NM_027558) promoter-TSS (NM_027558) -704 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_46_43_-0.185770315335243_5.36654646096968_0.343417008601348 chr12 26340282 26340782 + 0.343417008601348 NA intron (NM_080563, intron 2 of 8) intron (NM_080563, intron 2 of 8) -6178 NR_130981 75243 Mm.444753 NR_130981 ENSMUSG00000114048 4930549C15Rik - RIKEN cDNA 4930549C15 gene ncRNA common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-2 chr11 61408030 61408571 + 0.343417008601348 NA Intergenic CpG -30225 NM_026183 67473 Mm.100741 NM_026183 ENSMUSG00000010122 Slc47a1 1300013J15Rik|AI036982|MATE1|mMATE1 solute carrier family 47, member 1 protein-coding common_peak2_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-4 chr3 88775323 88775896 + 0.343417008601348 NA Intergenic B1_Mus1|SINE|Alu -1448 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo common_peak1_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-3 chr2 71589461 71590153 + 0.343417008601348 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -43053 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-4 chr15 80173701 80174237 + 0.343417008601348 NA intron (NM_010795, intron 1 of 1) CpG 248 NM_010795 17309 Mm.299693 NM_010795 ENSMUSG00000042428 Mgat3 1110038J12Rik|AI848272|GnT-III mannoside acetylglucosaminyltransferase 3 protein-coding common_peak2_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-7 chr7 16174812 16175646 + 0.343417008601348 NA promoter-TSS (NM_001302472) promoter-TSS (NM_001302472) -166 NM_001277988 17537 Mm.360516 NM_008627 ENSMUSG00000041420 Meis3 AI573393|Mrg2 Meis homeobox 3 protein-coding common_peak1_46_43_-0.185770315335243_5.36654646096968_0.343417008601348-4 chr4 139379637 139380397 + 0.343417008601348 NA promoter-TSS (NM_001160319) promoter-TSS (NM_001160319) -642 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding common_peak1_51_39_0.0965550999945064_5.37020564488462_0.343417008601348-6 chr2 84635080 84635514 + 0.343417008601348 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 14183 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak2_260_203_0.0571039042874375_7.70097729411521_0.34341627397537 chr1 132298563 132300680 + 0.34341627397537 NA exon (NM_144810, exon 1 of 5) exon (NM_144810, exon 1 of 5) 995 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_207_161_0.0645232328507568_7.37211161931_0.343147525913575 chr2 38511436 38513833 + 0.343147525913575 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 758 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_74_67_-0.144328376870576_6.01529865281505_0.343123337561539-2 chr4 95052813 95053231 + 0.343123337561539 NA promoter-TSS (NM_010591) promoter-TSS (NM_010591) -800 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_74_67_-0.144328376870576_6.01529865281505_0.343123337561539-3 chr8 35664655 35665593 + 0.343123337561539 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -76104 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_75_67_-0.125354366278437_6.02478565811112_0.343123337561539 chr1 69276455 69277431 + 0.343123337561539 NA Intergenic Intergenic -168884 NM_010154 13869 Mm.442420 NM_010154 ENSMUSG00000062209 Erbb4 Her4|c-erbB-4 erb-b2 receptor tyrosine kinase 4 protein-coding common_peak1_75_67_-0.125354366278437_6.02478565811112_0.343123337561539-2 chr2 94010060 94010749 + 0.343123337561539 NA intron (NM_026944, intron 1 of 9) intron (NM_026944, intron 1 of 9) 326 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak2_75_67_-0.125354366278437_6.02478565811112_0.343123337561539 chr19 9981685 9982411 + 0.343123337561539 NA promoter-TSS (NM_010239) promoter-TSS (NM_010239) -598 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak2_74_67_-0.144328376870576_6.01529865281505_0.343123337561539-2 chr17 35837339 35838232 + 0.343123337561539 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 516 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak2_74_67_-0.144328376870576_6.01529865281505_0.343123337561539 chr16 37777005 37777675 + 0.343123337561539 NA exon (NM_008047, exon 2 of 11) exon (NM_008047, exon 2 of 11) 285 NM_008047 14314 Mm.182434 NM_008047 ENSMUSG00000022816 Fstl1 AI316791|AW107808|Fstl|TSC-36 follistatin-like 1 protein-coding common_peak2_75_67_-0.125354366278437_6.02478565811112_0.343123337561539-2 chr2 163809532 163810693 + 0.343123337561539 NA Intergenic Intergenic -10722 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_74_67_-0.144328376870576_6.01529865281505_0.343123337561539 chr13 54686883 54687653 + 0.343123337561539 NA intron (NR_027396, intron 1 of 10) CpG 540 NM_001146025 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak2_81_62_0.0936796441005212_6.02411974555018_0.343123337561527-3 chr8 69774570 69775007 + 0.343123337561527 NA intron (NM_177899, intron 1 of 3) CpG 123 NM_177899 330788 Mm.41364 NM_177899 ENSMUSG00000043090 Zfp866 9830167H18Rik|AI875089|C85843|D330038O06Rik zinc finger protein 866 protein-coding common_peak1_81_62_0.0936796441005212_6.02411974555018_0.343123337561527-3 chr19 42170581 42171129 + 0.343123337561527 NA intron (NM_177319, intron 1 of 12) CpG 288 NM_001164531 319740 Mm.287359 NM_177319 ENSMUSG00000018820 Zfyve27 2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681 zinc finger, FYVE domain containing 27 protein-coding common_peak2_81_62_0.0936796441005212_6.02411974555018_0.343123337561527-2 chr7 127008526 127009437 + 0.343123337561527 NA intron (NM_080638, intron 1 of 14) intron (NM_080638, intron 1 of 14) 5613 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak2_81_62_0.0936796441005212_6.02411974555018_0.343123337561527 chr13 9276527 9277187 + 0.343123337561527 NA 5' UTR (NM_001081426, exon 1 of 37) 5' UTR (NM_001081426, exon 1 of 37) 332 NM_001081426 208440 Mm.217326 NM_172459 ENSMUSG00000048264 Dip2c 2900024P20Rik|9630044M06|mKIAA0934 disco interacting protein 2 homolog C protein-coding common_peak1_81_62_0.0936796441005212_6.02411974555018_0.343123337561527-4 chr4 11253504 11254532 + 0.343123337561527 NA exon (NM_178112, exon 1 of 28) exon (NM_178112, exon 1 of 28) 241 NM_178112 72656 Mm.246713 NM_178112 ENSMUSG00000040738 Ints8 2810013E07Rik|AV063769|D130008D20Rik integrator complex subunit 8 protein-coding common_peak1_81_62_0.0936796441005212_6.02411974555018_0.343123337561527 chr12 52603052 52603773 + 0.343123337561527 NA Intergenic Intergenic -1090 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak1_81_62_0.0936796441005212_6.02411974555018_0.343123337561527-2 chr13 9276517 9277195 + 0.343123337561527 NA 5' UTR (NM_001081426, exon 1 of 37) 5' UTR (NM_001081426, exon 1 of 37) 331 NM_001081426 208440 Mm.217326 NM_172459 ENSMUSG00000048264 Dip2c 2900024P20Rik|9630044M06|mKIAA0934 disco interacting protein 2 homolog C protein-coding common_peak2_150_130_-0.0878250972804109_6.98951045289724_0.343091548103993 chr2 52741537 52742688 + 0.343091548103993 NA promoter-TSS (NM_019667) promoter-TSS (NM_019667) 37 NM_019667 56324 Mm.263639 NM_019667 ENSMUSG00000055371 Stam2 1200004O12Rik|5730456G07Rik|BB145015|Hbp signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein-coding common_peak1_117_90_0.0845514655507387_6.55007037297407_0.343065785969797 chr19 53555558 53556130 + 0.343065785969797 NA Intergenic Intergenic 26526 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_109_96_-0.108135520409434_6.54584508198241_0.343065785969797 chr2 90579310 90580621 + 0.343065785969797 NA intron (NM_008982, intron 1 of 23) CpG 682 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_109_96_-0.108135520409434_6.54584508198241_0.343065785969797 chr16 92624430 92625268 + 0.343065785969797 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 72480 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_116_90_0.0723597591380818_6.54397451976774_0.343065785969797 chr2 26388483 26389739 + 0.343065785969797 NA promoter-TSS (NM_173180) promoter-TSS (NM_173180) 205 NM_001085407 68112 Mm.253771 NM_026563 ENSMUSG00000026927 Sdccag3 C330016H24Rik|C630038K21Rik serologically defined colon cancer antigen 3 protein-coding common_peak2_312_264_-0.060055653634091_8.01982072263352_0.342952916675262 chr8 126594854 126596298 + 0.342952916675262 NA Intergenic Intergenic -2140 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_252_215_-0.0699538215611932_7.71991059138287_0.342812101284478 chr10 111507587 111510750 + 0.342812101284478 NA TTS (NM_009344) TTS (NM_009344) 2882 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_159_124_0.0627477195898551_6.99715814445701_0.342761570342931 chr18 67934079 67935716 + 0.342761570342931 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 1724 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-4 chr16 43699150 43699446 + 0.342639663781856 NA Intergenic PB1D11|SINE|Alu -35114 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-13 chr4 141147253 141147783 + 0.342639663781856 NA promoter-TSS (NM_172518) promoter-TSS (NM_172518) -404 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-9 chr2 141266948 141267276 + 0.342639663781856 NA intron (NM_001013802, intron 5 of 18) intron (NM_001013802, intron 5 of 18) -595636 NM_178382 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-3 chr15 77913230 77913739 + 0.342639663781856 NA Intergenic MIRb|SINE|MIR 15510 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-4 chr12 110796759 110797364 + 0.342639663781856 NA intron (NM_001347428, intron 2 of 2) intron (NM_001347428, intron 2 of 2) 43878 NM_011973 26448 Mm.140948 NM_011973 ENSMUSG00000056458 Mok RAGE1|Rage|Stk30 MOK protein kinase protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-4 chr13 34162740 34163172 + 0.342639663781856 NA promoter-TSS (NM_001101430) promoter-TSS (NM_001101430) -8 NM_001101430 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-6 chr4 126429177 126429412 + 0.342639663781856 NA 5' UTR (NM_153402, exon 1 of 19) 5' UTR (NM_153402, exon 1 of 19) 248 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-10 chr2 30285891 30286231 + 0.342639663781856 NA promoter-TSS (NM_198304) promoter-TSS (NM_198304) 293 NM_177648 227697 Mm.26690 NM_177648 ENSMUSG00000075419 Dolk BC026973|Tmem15|mKIAA1094 dolichol kinase protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856 chr10 75763929 75764165 + 0.342639663781856 NA 5' UTR (NM_172549, exon 1 of 37) 5' UTR (NM_172549, exon 1 of 37) 310 NM_172549 104248 Mm.257404 NM_172549 ENSMUSG00000020196 Cabin1 A330070M20Rik|Cain|Ppp3in calcineurin binding protein 1 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-14 chr4 149773785 149774206 + 0.342639663781856 NA intron (NM_027460, intron 1 of 6) CpG 272 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-15 chr9 50845964 50846390 + 0.342639663781856 NA Intergenic Intergenic -10747 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-21 chr9 65884589 65885001 + 0.342639663781856 NA intron (NM_001357872, intron 2 of 13) intron (NM_001357872, intron 2 of 13) 378 NM_001170907 56404 Mm.208379 NM_019797 ENSMUSG00000032386 Trip4 4930558E03Rik|ASC-1|Asc1|BB191711 thyroid hormone receptor interactor 4 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-3 chr12 10491025 10491537 + 0.342639663781856 NA intron (NR_110487, intron 8 of 11) intron (NR_110487, intron 8 of 11) 44893 NR_110487 328061 Mm.56067 NR_110487 ENSMUSG00000112792 Gm38407 4931412M21 predicted gene, 38407 ncRNA common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-12 chr6 53573468 53573910 + 0.342639663781856 NA intron (NM_172728, intron 1 of 6) intron (NM_172728, intron 1 of 6) 315 NM_172728 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding unique_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856 chr10 75150815 75151199 + 0.342639663781856 NA intron (NM_001081412, intron 8 of 22) intron (NM_001081412, intron 8 of 22) -61066 NM_153406 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding unique_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-3 chr13 67683004 67683500 + 0.342639663781856 NA intron (NM_001001187, intron 1 of 3) intron (NM_001001187, intron 1 of 3) 260 NM_001001187 408068 Mm.435551 NM_175676 ENSMUSG00000048280 Zfp738 3830402I07Rik|6720487G11Rik zinc finger protein 738 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-11 chr6 47835898 47836200 + 0.342639663781856 NA intron (NM_173034, intron 1 of 4) CpG 388 NM_173034 272347 Mm.169059 NM_027477 ENSMUSG00000062519 Zfp398 5730513I23Rik zinc finger protein 398 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-11 chr3 37642858 37643174 + 0.342639663781856 NA exon (NM_001305442, exon 2 of 2) exon (NM_001305442, exon 2 of 2) 3069 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-14 chr9 27030308 27030638 + 0.342639663781856 NA promoter-TSS (NM_178027) promoter-TSS (NM_178027) 298 NM_178113 78658 Mm.251777 NM_178113 ENSMUSG00000035024 Ncapd3 2810487N22Rik|4632407J06Rik|AI195468|AU018739|B130055D15Rik|mKIAA0056 non-SMC condensin II complex, subunit D3 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-2 chr12 84919436 84919817 + 0.342639663781856 NA 3' UTR (NM_178065, exon 20 of 20) 3' UTR (NM_178065, exon 20 of 20) -43131 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-19 chr8 128164451 128164810 + 0.342639663781856 NA Intergenic Intergenic 113595 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-11 chr2 165666589 165667046 + 0.342639663781856 NA intron (NM_001271962, intron 2 of 15) intron (NM_001271962, intron 2 of 15) 11519 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-2 chr11 43900646 43901091 + 0.342639663781856 NA intron (NM_001284381, intron 1 of 4) intron (NM_001284381, intron 1 of 4) 369 NM_001284380 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-9 chr2 32153727 32154073 + 0.342639663781856 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 2752 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-20 chr9 61402708 61403076 + 0.342639663781856 NA intron (NM_001083928, intron 7 of 19) intron (NM_001083928, intron 7 of 19) 30526 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-19 chr8 11360996 11361424 + 0.342639663781856 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -48384 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-2 chr10 122919655 122920181 + 0.342639663781856 NA intron (NM_001110218, intron 8 of 9) intron (NM_001110218, intron 8 of 9) 65806 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-17 chr6 124808810 124809126 + 0.342639663781856 NA promoter-TSS (NM_001306052) promoter-TSS (NM_001306052) 50 NM_001306053 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-3 chr13 23543833 23544216 + 0.342639663781856 NA promoter-TSS (NM_013548) promoter-TSS (NM_013548) -28 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-9 chr5 146794421 146794667 + 0.342639663781856 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 412 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-8 chr2 128430511 128431021 + 0.342639663781856 NA Intergenic Intergenic -1415 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-12 chr3 89730786 89731067 + 0.342639663781856 NA intron (NM_001146296, intron 1 of 14) intron (NM_001146296, intron 1 of 14) 208 NM_019655 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856 chr1 132290704 132290938 + 0.342639663781856 NA Intergenic Intergenic -7805 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-12 chr4 136808175 136808506 + 0.342639663781856 NA intron (NM_010142, intron 1 of 15) intron (NM_010142, intron 1 of 15) 27672 NM_001290753 13844 Mm.250981 NM_010142 ENSMUSG00000028664 Ephb2 Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5 Eph receptor B2 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-17 chr7 98480779 98481112 + 0.342639663781856 NA Intergenic Intergenic -13277 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-13 chr3 96226450 96226683 + 0.342639663781856 NA Intergenic Intergenic 5494 NM_178214 319190 Mm.439791 NM_178214 ENSMUSG00000068854 Hist2h2be AV127319|H2b-613|T25626 histone cluster 2, H2be protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856 chr10 68280419 68281048 + 0.342639663781856 NA Intergenic Intergenic -2007 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-8 chr19 43530552 43531018 + 0.342639663781856 NA Intergenic Intergenic -6180 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-10 chr5 147076829 147077302 + 0.342639663781856 NA promoter-TSS (NM_181730) promoter-TSS (NM_181730) -281 NM_181730 20018 Mm.317557 NM_009087 ENSMUSG00000029642 Polr1d 1110003G10Rik|AC19|RPA16|Rpo1-3 polymerase (RNA) I polypeptide D protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-8 chr18 66002226 66002600 + 0.342639663781856 NA exon (NM_001172062, exon 1 of 13) exon (NM_001172062, exon 1 of 13) 222 NM_027400 70361 Mm.290857 NM_027400 ENSMUSG00000041891 Lman1 2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58 lectin, mannose-binding, 1 protein-coding unique_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-4 chr2 128575241 128575658 + 0.342639663781856 NA Intergenic Intergenic -16892 NM_001310641 241634 Mm.297682 NM_001310641 ENSMUSG00000074812 Spdye4c Gm355|SpeedyB3|SpyB3 speedy/RINGO cell cycle regulator family, member E4C protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-20 chr9 23166710 23167238 + 0.342639663781856 NA Intergenic Intergenic -56102 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-12 chr6 66998102 66998675 + 0.342639663781856 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -38211 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-5 chr18 36448223 36448504 + 0.342639663781856 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 6132 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-11 chr5 38479914 38480313 + 0.342639663781856 NA exon (NM_001102414, exon 1 of 12) exon (NM_001102414, exon 1 of 12) 193 NM_001102414 117591 Mm.260137 NM_145559 ENSMUSG00000005107 Slc2a9 Glut9|SLC2A9B|SLC2a9A solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding unique_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856 chr10 77606653 77607001 + 0.342639663781856 NA 5' UTR (NM_001301671, exon 1 of 4) 5' UTR (NM_001301671, exon 1 of 4) 229 NM_001301671 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-9 chr19 24173766 24174040 + 0.342639663781856 NA intron (NM_011597, intron 1 of 22) CpG 286 NM_001198985 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856 chr11 35935276 35935548 + 0.342639663781856 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 44677 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-6 chr19 44281114 44281343 + 0.342639663781856 NA Intergenic Intergenic -12448 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-7 chr17 29436652 29437113 + 0.342639663781856 NA Intergenic Intergenic -54163 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-4 chr17 6655178 6655705 + 0.342639663781856 NA intron (NM_001166630, intron 1 of 4).2 CpG 390 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding unique_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-2 chr9 65293609 65294130 + 0.342639663781856 NA promoter-TSS (NM_011802) promoter-TSS (NM_011802) -391 NM_011802 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-14 chr3 123138756 123139110 + 0.342639663781856 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) 97216 NM_080451 118449 Mm.34359 NM_080451 ENSMUSG00000050315 Synpo2 1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo synaptopodin 2 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-5 chr14 56690202 56690696 + 0.342639663781856 NA intron (NR_153396, intron 9 of 12) intron (NR_153396, intron 9 of 12) 10551 NR_046209 100503823 Mm.474486 NR_046209 Gm16973 - predicted gene, 16973 ncRNA common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-10 chr2 121473575 121473981 + 0.342639663781856 NA intron (NM_001081975, intron 1 of 6) intron (NM_001081975, intron 1 of 6) 245 NM_001081975 100034361 Mm.270393 NM_001081975 ENSMUSG00000048222 Mfap1b - microfibrillar-associated protein 1B protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-18 chr7 112644314 112644564 + 0.342639663781856 NA Intergenic Intergenic -34881 NM_001166584 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-7 chr5 29861245 29861504 + 0.342639663781856 NA Intergenic Intergenic -125438 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-18 chr7 116202887 116203345 + 0.342639663781856 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -4555 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-5 chr2 34372212 34372637 + 0.342639663781856 NA promoter-TSS (NM_016768) promoter-TSS (NM_016768) -379 NM_016768 18516 Mm.239941 NM_016768 ENSMUSG00000038718 Pbx3 - pre B cell leukemia homeobox 3 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-16 chr6 108708875 108709337 + 0.342639663781856 NA Intergenic Intergenic -48172 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856 chr1 180850189 180850724 + 0.342639663781856 NA promoter-TSS (NM_145943) promoter-TSS (NM_145943) -695 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-6 chr16 24398391 24398736 + 0.342639663781856 NA intron (NM_178665, intron 1 of 12) intron (NM_178665, intron 1 of 12) -4908 NR_037954 68841 Mm.361995 NR_037954 Lppos 1110054M08Rik|AI481106 LIM domain containing preferred translocation partner in lipoma, opposite strand ncRNA common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-6 chr15 79141530 79141787 + 0.342639663781856 NA promoter-TSS (NM_001310579) promoter-TSS (NM_001310579) 333 NM_027231 69833 Mm.279861 NM_027231 ENSMUSG00000033020 Polr2f 1810060D16Rik|RPB6 polymerase (RNA) II (DNA directed) polypeptide F protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-8 chr5 32713580 32713913 + 0.342639663781856 NA Intergenic Intergenic 32596 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-15 chr5 102846018 102846606 + 0.342639663781856 NA intron (NM_001346585, intron 1 of 6) intron (NM_001346585, intron 1 of 6) 1305 NM_001346585 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-7 chr2 121473580 121474009 + 0.342639663781856 NA intron (NM_001081975, intron 1 of 6) intron (NM_001081975, intron 1 of 6) 229 NM_001081975 100034361 Mm.270393 NM_001081975 ENSMUSG00000048222 Mfap1b - microfibrillar-associated protein 1B protein-coding unique_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-2 chr10 75548955 75549418 + 0.342639663781856 NA TTS (NM_198860) TTS (NM_198860) 11144 NM_198860 192734 Mm.259320 NM_198860 ENSMUSG00000046807 Lrrc75b AI646023|Fam211b leucine rich repeat containing 75B protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-15 chr4 83916377 83916839 + 0.342639663781856 NA Intergenic MLT1K|LTR|ERVL-MaLR 128271 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-13 chr8 25521479 25521760 + 0.342639663781856 NA intron (NM_001079908, intron 1 of 17) intron (NM_001079908, intron 1 of 17) 2860 NM_001079908 14182 Mm.265716 NM_010206 ENSMUSG00000031565 Fgfr1 AW208770|Eask|FGFR-I|FLG|Fgfr-1|Flt-2|Hspy|MFR|bFGF-R-1|c-fgr fibroblast growth factor receptor 1 protein-coding common_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-7 chr15 79414839 79415137 + 0.342639663781856 NA Intergenic Intergenic -11685 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-3 chr14 20229727 20230321 + 0.342639663781856 NA Intergenic Intergenic 39138 NM_029006 74571 Mm.105571 NM_029006 ENSMUSG00000023387 Kcnk16 4731413G05Rik|TALK-1|TALK1 potassium channel, subfamily K, member 16 protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-5 chr14 76714477 76714756 + 0.342639663781856 NA Intergenic Intergenic 37048 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA unique_peak2_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-5 chr6 146912913 146913554 + 0.342639663781856 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 24739 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_29_22_0.106970589142116_4.57704725062807_0.342639663781856-10 chr4 132397787 132398068 + 0.342639663781856 NA intron (NM_001161797, intron 2 of 12) intron (NM_001161797, intron 2 of 12) 24519 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-2 chr11 78751109 78751592 + 0.342639663781856 NA exon (NM_197989, exon 1 of 1) exon (NM_197989, exon 1 of 1) 379 NM_197989 69109 Mm.341420 NM_197989 ENSMUSG00000049489 Fam58b 1810009O10Rik|Ccnq|Fam58a family with sequence similarity 58, member B protein-coding common_peak1_29_22_0.106970589142116_4.57704725062807_0.342639663781856-16 chr5 135911601 135911956 + 0.342639663781856 NA intron (NM_018871, intron 1 of 1) intron (NM_018871, intron 1 of 1) 22863 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_26_25_-0.220837887667689_4.59002077430725_0.342639663781856-13 chrX 13845959 13846665 + 0.342639663781856 NA 5' UTR (NM_001284504, exon 1 of 24) 5' UTR (NM_001284504, exon 1 of 24) 244 NM_001284505 12361 Mm.327591 NM_009806 ENSMUSG00000031012 Cask DXPri1|DXRib1|LIN-2|Pals3|mLin-2 calcium/calmodulin-dependent serine protein kinase (MAGUK family) protein-coding common_peak1_110_97_-0.109968480403555_6.55972560391343_0.342618443965869-2 chr5 64806491 64807588 + 0.342618443965869 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 3516 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_110_97_-0.109968480403555_6.55972560391343_0.342618443965869 chr10 24481145 24482770 + 0.342618443965869 NA Intergenic Intergenic -113485 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_82_63_0.0883236208909182_6.04416181044546_0.342480376340174 chr19 45748944 45749614 + 0.342480376340174 NA TTS (NR_151594) TTS (NR_151594) 284 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding common_peak2_82_63_0.0883236208909182_6.04416181044546_0.342480376340174-3 chr9 32697189 32698094 + 0.342480376340174 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 1599 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_82_63_0.0883236208909182_6.04416181044546_0.342480376340174 chr12 4906968 4907833 + 0.342480376340174 NA 5' UTR (NM_145441, exon 1 of 7) 5' UTR (NM_145441, exon 1 of 7) 120 NM_145441 217379 Mm.259170 NM_145441 ENSMUSG00000020634 Ubxn2a 6330407P03Rik|Ubxd4 UBX domain protein 2A protein-coding common_peak1_82_63_0.0883236208909182_6.04416181044546_0.342480376340174-2 chr12 110086966 110087625 + 0.342480376340174 NA Intergenic Intergenic 70778 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak2_82_63_0.0883236208909182_6.04416181044546_0.342480376340174-2 chr3 9608478 9609603 + 0.342480376340174 NA intron (NM_133218, intron 1 of 8) CpG 1045 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak1_76_68_-0.12769000460698_6.04467945447468_0.342480376340174-2 chr8 111719801 111720962 + 0.342480376340174 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 11755 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_82_63_0.0883236208909182_6.04416181044546_0.342480376340174-3 chr14 7842385 7843676 + 0.342480376340174 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 25073 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_76_68_-0.12769000460698_6.04467945447468_0.342480376340174 chr3 88297137 88297830 + 0.342480376340174 NA promoter-TSS (NM_029801) promoter-TSS (NM_029801) 348 NM_009836 12462 Mm.256034 NM_009836 ENSMUSG00000001416 Cct3 AL024092|Cctg|Tcp1-rs3|TriC-P5 chaperonin containing Tcp1, subunit 3 (gamma) protein-coding common_peak1_161_125_0.069047550054453_7.01180369852714_0.34243673034368 chr5 35035693 35037479 + 0.34243673034368 NA Intergenic Intergenic -4923 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-7 chr4 89294880 89295262 + 0.342407020751092 NA promoter-TSS (NM_009877) promoter-TSS (NM_009877) -109 NR_132431 102633081 Mm.409388 NR_132431 Gm12610 ANRIL|Gm12609 predicted gene 12610 ncRNA common_peak1_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-3 chr8 75093658 75094139 + 0.342407020751092 NA intron (NM_010442, intron 1 of 4) intron (NM_010442, intron 1 of 4) 280 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-4 chr4 95105870 95106844 + 0.342407020751092 NA Intergenic Intergenic -54135 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-4 chr9 47531199 47531872 + 0.342407020751092 NA intron (NM_001025600, intron 1 of 8) CpG 1183 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092-4 chr2 152343212 152344029 + 0.342407020751092 NA intron (NM_175093, intron 1 of 3) intron (NM_175093, intron 1 of 3) 440 NM_175093 228775 Mm.276018 NM_144554 ENSMUSG00000032715 Trib3 Ifld2|Nipk|SINK|SKIP3|TRB-3|Trb3 tribbles pseudokinase 3 protein-coding common_peak1_48_44_-0.15849495296362_5.41260561984786_0.342407020751092 chr15 66845359 66845992 + 0.342407020751092 NA intron (NM_009375, intron 45 of 47) intron (NM_009375, intron 45 of 47) -13846 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-7 chr8 95137117 95137667 + 0.342407020751092 NA intron (NM_010631, intron 2 of 19) intron (NM_010631, intron 2 of 19) 5148 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak1_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-2 chr3 41083476 41084013 + 0.342407020751092 NA promoter-TSS (NM_027558) promoter-TSS (NM_027558) -698 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-3 chr3 90589242 90589915 + 0.342407020751092 NA promoter-TSS (NM_001195760) promoter-TSS (NM_001195760) -669 NM_001195760 628324 Mm.33816 NM_001195760 ENSMUSG00000094018 S100a2 CaN19|EG628324|S100L S100 calcium binding protein A2 protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092 chr19 10576763 10577271 + 0.342407020751092 NA promoter-TSS (NM_001302218) promoter-TSS (NM_001302218) 69 NM_001302218 72982 Mm.391194 NM_028411 ENSMUSG00000024666 Tmem138 1700113I01Rik|2900055D14Rik transmembrane protein 138 protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-10 chr4 137484860 137485596 + 0.342407020751092 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 16425 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_47_44_-0.188032429457669_5.39783688160084_0.342407020751092-5 chr17 45564080 45564722 + 0.342407020751092 NA intron (NM_001357105, intron 1 of 3) CpG 465 NM_001357105 73836 Mm.289716 NM_028662 ENSMUSG00000037089 Slc35b2 1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1 solute carrier family 35, member B2 protein-coding common_peak2_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-2 chr1 60565833 60566714 + 0.342407020751092 NA intron (NM_001045513, intron 1 of 13) CpG 492 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092-5 chr3 41290026 41290512 + 0.342407020751092 NA Intergenic PB1|SINE|Alu 202930 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-4 chr16 17452073 17452835 + 0.342407020751092 NA 5' UTR (NM_001277231, exon 1 of 2) 5' UTR (NM_001277231, exon 1 of 2) 469 NM_007764 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-2 chr3 84318125 84318831 + 0.342407020751092 NA Intergenic B1_Mur2|SINE|Alu -13703 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-2 chr11 74770827 74771297 + 0.342407020751092 NA intron (NM_026197, intron 1 of 9) CpG 199 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak2_47_44_-0.188032429457669_5.39783688160084_0.342407020751092-4 chr17 25133533 25134269 + 0.342407020751092 NA intron (NM_011930, intron 1 of 24) intron (NM_011930, intron 1 of 24) 510 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-9 chr4 133038608 133039410 + 0.342407020751092 NA intron (NM_146155, intron 2 of 6) CpG 27503 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-5 chr4 107804166 107804832 + 0.342407020751092 NA intron (NM_001080926, intron 2 of 18) RSINE1|SINE|B4 2240 NM_001080926 16975 Mm.442134 NM_053073 ENSMUSG00000028613 Lrp8 4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-8 chr4 107804002 107804467 + 0.342407020751092 NA intron (NM_001080926, intron 2 of 18) intron (NM_001080926, intron 2 of 18) 1975 NM_001080926 16975 Mm.442134 NM_053073 ENSMUSG00000028613 Lrp8 4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding common_peak1_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-4 chr8 77132561 77133230 + 0.342407020751092 NA intron (NM_001083906, intron 3 of 8) intron (NM_001083906, intron 3 of 8) 230387 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding common_peak2_53_40_0.114994846282076_5.41504942775912_0.342407020751092-2 chr2 104027896 104028400 + 0.342407020751092 NA 5' UTR (NM_175161, exon 1 of 5) intron (NM_001355505, intron 1 of 10) 213 NM_175161 70986 Mm.460738 NM_175161 4931422A03Rik - RIKEN cDNA 4931422A03 gene protein-coding common_peak2_52_40_0.0882180506517765_5.40166102994397_0.342407020751092 chr1 21009164 21009961 + 0.342407020751092 NA intron (NM_177409, intron 4 of 10) intron (NM_177409, intron 4 of 10) 57936 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_47_44_-0.188032429457669_5.39783688160084_0.342407020751092 chr19 7417784 7418274 + 0.342407020751092 NA intron (NM_175381, intron 1 of 4) CpG 404 NM_175381 108899 Mm.386838 NM_175381 ENSMUSG00000053080 2700081O15Rik AI255177|AI848741|AW742297 RIKEN cDNA 2700081O15 gene protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092 chr1 105356065 105356782 + 0.342407020751092 NA non-coding (NR_151538, exon 1 of 2) non-coding (NR_151538, exon 1 of 2) 287 NM_178779 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-6 chr2 32236101 32236953 + 0.342407020751092 NA promoter-TSS (NM_145145) promoter-TSS (NM_145145) -156 NM_145145 99011 Mm.31192 NM_145145 ENSMUSG00000039254 Pomt1 AI505244 protein-O-mannosyltransferase 1 protein-coding common_peak2_53_40_0.114994846282076_5.41504942775912_0.342407020751092-5 chr6 87887978 87888475 + 0.342407020751092 NA intron (NM_201244, intron 1 of 4) intron (NM_201244, intron 1 of 4) 254 NM_201244 54161 Mm.258785 NM_017477 ENSMUSG00000030058 Copg1 AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e coatomer protein complex, subunit gamma 1 protein-coding common_peak1_47_44_-0.188032429457669_5.39783688160084_0.342407020751092-2 chr7 45897176 45897705 + 0.342407020751092 NA promoter-TSS (NM_001291064) promoter-TSS (NM_001291064) 371 NM_144801 70209 Mm.163766 NM_144801 ENSMUSG00000002781 Tmem143 2310076O21Rik|AI481604 transmembrane protein 143 protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-3 chr15 38938790 38939321 + 0.342407020751092 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 5146 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-12 chr9 14053204 14053773 + 0.342407020751092 NA Intergenic Intergenic -222813 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_53_40_0.114994846282076_5.41504942775912_0.342407020751092 chr12 101957694 101958171 + 0.342407020751092 NA intron (NM_029705, intron 1 of 10) CpG 311 NM_029705 110616 Mm.271914 NM_029705 ENSMUSG00000021189 Atxn3 2210008M02Rik|AI463012|AI647473|ATX3|MJD1|Mjd|Sca3|ataxin-3 ataxin 3 protein-coding common_peak2_47_44_-0.188032429457669_5.39783688160084_0.342407020751092 chr10 127211020 127211565 + 0.342407020751092 NA intron (NM_001359280, intron 1 of 10) CpG 330 NM_054097 117150 Mm.22682 NM_054097 ENSMUSG00000025417 Pip4k2c Pip5k2c phosphatidylinositol-5-phosphate 4-kinase, type II, gamma protein-coding common_peak2_53_40_0.114994846282076_5.41504942775912_0.342407020751092-4 chr5 137779026 137779765 + 0.342407020751092 NA exon (NM_001356989, exon 2 of 3) exon (NM_001356989, exon 2 of 3) 491 NM_027242 69871 Mm.276058 NM_027242 ENSMUSG00000029725 Ppp1r35 2010007H12Rik|2010011D20Rik|AL024004 protein phosphatase 1, regulatory subunit 35 protein-coding common_peak2_47_44_-0.188032429457669_5.39783688160084_0.342407020751092-2 chr11 67052237 67052971 + 0.342407020751092 NA promoter-TSS (NM_025510) promoter-TSS (NM_025510) 14 NM_025510 66358 Mm.22511 NM_025510 ENSMUSG00000020910 Adprm 2310004I24Rik|MDS006 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-5 chr17 66101025 66101454 + 0.342407020751092 NA intron (NM_001278415, intron 1 of 8) GC_rich|Low_complexity|Low_complexity 320 NM_001278415 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092-6 chr7 112333170 112334021 + 0.342407020751092 NA intron (NM_177282, intron 17 of 19) intron (NM_177282, intron 17 of 19) -34713 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-3 chr3 121661858 121662523 + 0.342407020751092 NA Intergenic Intergenic -8573 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092-3 chr17 53689537 53690228 + 0.342407020751092 NA promoter-TSS (NM_028232) promoter-TSS (NM_028232) -567 NM_028232 72415 Mm.153202 NM_028232 ENSMUSG00000023940 Sgo1 3300001M08Rik|C81037|Sgol1 shugoshin 1 protein-coding common_peak2_53_40_0.114994846282076_5.41504942775912_0.342407020751092-3 chr2 134643374 134644017 + 0.342407020751092 NA intron (NM_029148, intron 1 of 7) CpG 426 NM_029148 52837 Mm.264096 NM_029148 ENSMUSG00000034723 Tmx4 2810417D04Rik|4930500L08Rik|AI843224|AW046784|D2Bwg1356e|Txndc13|mKIAA1162 thioredoxin-related transmembrane protein 4 protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092-7 chr9 98313832 98314450 + 0.342407020751092 NA intron (NM_001357445, intron 1 of 3) intron (NM_001357445, intron 1 of 3) 17571 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_48_44_-0.15849495296362_5.41260561984786_0.342407020751092-6 chr5 148361920 148362530 + 0.342407020751092 NA intron (NM_007513, intron 2 of 12) intron (NM_007513, intron 2 of 12) 30590 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092-2 chr11 50224943 50225829 + 0.342407020751092 NA promoter-TSS (NM_145926) promoter-TSS (NM_145926) 51 NM_145926 103534 Mm.86759 NM_145926 ENSMUSG00000036620 Mgat4b AA407995|GnTIVb mannoside acetylglucosaminyltransferase 4, isoenzyme B protein-coding common_peak1_52_40_0.0882180506517765_5.40166102994397_0.342407020751092-11 chr5 125391910 125392395 + 0.342407020751092 NA Intergenic Intergenic -2135 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_47_44_-0.188032429457669_5.39783688160084_0.342407020751092-3 chr11 98412578 98413321 + 0.342407020751092 NA intron (NM_001003817, intron 1 of 26) CpG 465 NM_001003817 13866 Mm.290822 NM_001003817 ENSMUSG00000062312 Erbb2 Erbb-2|HER-2|HER2|Neu|c-erbB2|c-neu|l11Jus8|mKIAA3023 erb-b2 receptor tyrosine kinase 2 protein-coding common_peak1_53_40_0.114994846282076_5.41504942775912_0.342407020751092 chr10 120809659 120810463 + 0.342407020751092 NA intron (NM_177092, intron 5 of 6) intron (NM_177092, intron 5 of 6) 44329 NR_038003 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_256_218_-0.0673820655621471_7.7410960268201_0.342224911512832 chr15 77905047 77907592 + 0.342224911512832 NA Intergenic Intergenic 22675 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_119_92_0.0772637749446101_6.57779069858034_0.342180524438499 chr13 28542858 28544307 + 0.342180524438499 NA intron (NR_045053, intron 7 of 8) intron (NR_045053, intron 7 of 8) 167291 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_119_92_0.0772637749446101_6.57779069858034_0.342180524438499-2 chr19 4755908 4757301 + 0.342180524438499 NA promoter-TSS (NM_025717) promoter-TSS (NM_025717) 79 NM_025717 66704 Mm.396734 NM_025717 ENSMUSG00000033760 Rbm4b 4921506I22Rik|AI504630|AI506404|Lark2|Neosin RNA binding motif protein 4B protein-coding common_peak2_119_92_0.0772637749446101_6.57779069858034_0.342180524438499 chr11 3648055 3648994 + 0.342180524438499 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) 290 NR_002321 544752 Mm.390314 NR_002321 ENSMUSG00000056579 Tug1 AI316828 taurine upregulated gene 1 ncRNA common_peak1_112_98_-0.0990339184193578_6.57983966086993_0.342180524438475 chr1 134415403 134416449 + 0.342180524438475 NA 5' UTR (NM_001306069, exon 1 of 8) 5' UTR (NM_001306069, exon 1 of 8) 262 NM_001306069 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak2_111_98_-0.111767485434173_6.57347287736252_0.342180524438475 chr16 96091386 96092587 + 0.342180524438475 NA Intergenic Intergenic -9558 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak1_162_126_0.0664583029522587_7.0219138382483_0.342116909026332 chr12 84316442 84317801 + 0.342116909026332 NA non-coding (NR_045546, exon 1 of 12) non-coding (NR_045546, exon 1 of 12) 262 NM_001252583 52708 Mm.255150 NM_144833 ENSMUSG00000042472 Zfp410 Apa1|D12Ertd748e|Znf410 zinc finger protein 410 protein-coding common_peak2_162_126_0.0664583029522587_7.0219138382483_0.342116909026332 chr17 24168674 24169727 + 0.342116909026332 NA promoter-TSS (NM_001361535) promoter-TSS (NM_001361535) 195 NR_037854 100039636 Mm.30155 NR_037854 Atp6v0c-ps2 Atp6c-rs2|Atp6c3|Atp6l-ps2|Atp6v0c-rs2|Atpl-rs2|Gm15487|MGPLlambda1-3 ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2 pseudo common_peak1_162_126_0.0664583029522587_7.0219138382483_0.342116909026332-2 chr19 38024286 38025340 + 0.342116909026332 NA intron (NM_001302140, intron 1 of 53) MIR|SINE|MIR 18764 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_203_174_-0.0746546114149114_7.41388380612487_0.341908542872274 chr4 43399191 43400847 + 0.341908542872274 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -6483 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_83_64_0.0831119034176817_6.06392376473729_0.34185676619046 chr17 27037685 27038662 + 0.34185676619046 NA Intergenic Intergenic 8914 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_77_69_-0.129964219835642_6.06430090702715_0.34185676619046 chr19 18891630 18892212 + 0.34185676619046 NA intron (NM_153417, intron 38 of 38) intron (NM_153417, intron 38 of 38) 109196 NM_146095 225998 Mm.234641 NM_146095 ENSMUSG00000036192 Rorb Nr1f2|RZR-beta|RZRB|Rorbeta|hstp RAR-related orphan receptor beta protein-coding common_peak2_77_69_-0.129964219835642_6.06430090702715_0.34185676619046-2 chr3 121602321 121603695 + 0.34185676619046 NA Intergenic MLT1A1|LTR|ERVL-MaLR 40477 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_83_64_0.0831119034176817_6.06392376473729_0.34185676619046-2 chr2 122701453 122702811 + 0.34185676619046 NA exon (NM_001290993, exon 1 of 6) exon (NM_001290993, exon 1 of 6) 531 NM_011774 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding common_peak1_77_69_-0.129964219835642_6.06430090702715_0.34185676619046 chr19 4305409 4306062 + 0.34185676619046 NA intron (NM_130863, intron 1 of 21) CpG 487 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_77_69_-0.129964219835642_6.06430090702715_0.34185676619046-2 chr7 27258778 27259785 + 0.34185676619046 NA intron (NM_010950, intron 1 of 9) intron (NM_010950, intron 1 of 9) 520 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding common_peak2_83_64_0.0831119034176817_6.06392376473729_0.34185676619046-2 chr8 121990481 121991056 + 0.34185676619046 NA intron (NM_016812, intron 5 of 13) intron (NM_016812, intron 5 of 13) 12744 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak2_77_69_-0.129964219835642_6.06430090702715_0.34185676619046-3 chr4 41274132 41275196 + 0.34185676619046 NA intron (NM_026872, intron 1 of 28) intron (NM_026872, intron 1 of 28) 471 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak2_83_64_0.0831119034176817_6.06392376473729_0.34185676619046 chr14 87416037 87417051 + 0.34185676619046 NA promoter-TSS (NM_172605) promoter-TSS (NM_172605) -39 NM_172605 219249 Mm.35168 NM_172605 ENSMUSG00000022019 Tdrd3 4732418C03Rik|6720468N18 tudor domain containing 3 protein-coding common_peak1_163_127_0.063904588027194_7.0319522940136_0.341801990962403 chr11 70699866 70701872 + 0.341801990962403 NA promoter-TSS (NM_001252485) promoter-TSS (NM_001252485) 321 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding common_peak1_154_134_-0.0937641383174146_7.02993352789212_0.341801990962403-2 chr5 64811446 64813367 + 0.341801990962403 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 8883 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_155_134_-0.0845517795147508_7.03453970729346_0.341801990962403 chr8 85036821 85038619 + 0.341801990962403 NA intron (NM_001122843, intron 1 of 24) CpG 552 NM_001122843 212999 Mm.220357 NM_145390 ENSMUSG00000031691 Tnpo2 1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2 transportin 2 (importin 3, karyopherin beta 2b) protein-coding common_peak1_154_134_-0.0937641383174146_7.02993352789212_0.341801990962403 chr1 89687473 89688989 + 0.341801990962403 NA intron (NM_001037136, intron 9 of 16) intron (NM_001037136, intron 9 of 16) -4339 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_120_93_0.0737219092986869_6.59144980632698_0.341751732740254 chr6 65042564 65043353 + 0.341751732740254 NA promoter-TSS (NM_001253392) promoter-TSS (NM_001253392) -248 NM_001253392 13990 Mm.99113 NM_007958 ENSMUSG00000029920 Smarcad1 AV081750|AW226546|D6Pas1|Etl1|etl-1|mKIAA1122 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding common_peak1_113_99_-0.100912112575368_6.59340013348704_0.341751732740254 chr3 34172248 34173100 + 0.341751732740254 NA Intergenic Intergenic -91320 NM_001286973 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding common_peak1_113_99_-0.100912112575368_6.59340013348704_0.341751732740254-2 chr7 112376203 112377204 + 0.341751732740254 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 8395 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_204_175_-0.0758701318562247_7.42149655270918_0.341669443295419 chr10 60829356 60831514 + 0.341669443295419 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 1146 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_214_167_0.0594720470380619_7.42205344629779_0.341669443295419 chr2 156178933 156180177 + 0.341669443295419 NA promoter-TSS (NM_001291115) promoter-TSS (NM_001291115) 25 NM_001291115 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak2_204_175_-0.0758701318562247_7.42149655270918_0.341669443295419-2 chr4 126255424 126257349 + 0.341669443295419 NA promoter-TSS (NM_144941) promoter-TSS (NM_144941) -67 NM_001145970 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-4 chr3 95110857 95111294 + 0.341444061219173 NA promoter-TSS (NM_009336) promoter-TSS (NM_009336) 33 NM_009336 21427 Mm.133919 NM_009336 ENSMUSG00000008958 Vps72 Tcfl1|YL-1 vacuolar protein sorting 72 protein-coding common_peak1_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-2 chr3 90601834 90602600 + 0.341444061219173 NA exon (NM_001355597, exon 3 of 3) exon (NM_001355597, exon 3 of 3) -1553 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak2_54_41_0.106514878572178_5.44557486206485_0.341444061219173-3 chr15 53174498 53175180 + 0.341444061219173 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 171344 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173-2 chr2 151979639 151980015 + 0.341444061219173 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 392 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak2_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-3 chr2 156196683 156197513 + 0.341444061219173 NA intron (NM_172674, intron 1 of 17) CpG 451 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak1_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-3 chr4 134244674 134245519 + 0.341444061219173 NA non-coding (NR_040435, exon 4 of 5) non-coding (NR_040435, exon 4 of 5) 495 NM_024215 68040 Mm.300404 NM_024215 ENSMUSG00000028840 Zfp593 3110024A21Rik|AV062409|E130106C14Rik|ZNF593 zinc finger protein 593 protein-coding common_peak2_54_41_0.106514878572178_5.44557486206485_0.341444061219173-4 chr3 36449567 36450161 + 0.341444061219173 NA intron (NM_009673, intron 12 of 12) intron (NM_009673, intron 12 of 12) 25660 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173-6 chr8 95886708 95887279 + 0.341444061219173 NA intron (NM_010325, intron 1 of 9) intron (NM_010325, intron 1 of 9) 1372 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding common_peak2_54_41_0.106514878572178_5.44557486206485_0.341444061219173-2 chr14 76742536 76743185 + 0.341444061219173 NA Intergenic Intergenic -17271 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173 chr12 86887839 86888519 + 0.341444061219173 NA Intergenic Intergenic -3365 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173-5 chr7 15945712 15946104 + 0.341444061219173 NA exon (NM_133831, exon 1 of 13) exon (NM_133831, exon 1 of 13) 200 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Nop53 5330430H08Rik|9430097C02Rik|AU041936|AW536441|Gltscr2|PICT-1|R74911 NOP53 ribosome biogenesis factor protein-coding common_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173-4 chr6 122308968 122309502 + 0.341444061219173 NA intron (NM_010749, intron 1 of 6) CpG 515 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak1_49_45_-0.161263093904704_5.44293040910466_0.341444061219173 chr11 5834126 5834993 + 0.341444061219173 NA intron (NM_017401, intron 5 of 10) L2b|LINE|L2 3457 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173-3 chr4 40947644 40948196 + 0.341444061219173 NA promoter-TSS (NM_029814) promoter-TSS (NM_029814) 374 NM_009736 12017 Mm.688 NM_009736 ENSMUSG00000028416 Bag1 BAG-1|Rap46 BCL2-associated athanogene 1 protein-coding common_peak1_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-4 chr4 155236607 155237371 + 0.341444061219173 NA Intergenic Intergenic -12977 NM_001190445 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-2 chr19 58455670 58456290 + 0.341444061219173 NA promoter-TSS (NR_104342) promoter-TSS (NR_104342) -582 NM_010279 14585 Mm.88367 NM_010279 ENSMUSG00000025089 Gfra1 AU042498 glial cell line derived neurotrophic factor family receptor alpha 1 protein-coding common_peak2_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-5 chr4 43964182 43964761 + 0.341444061219173 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 6769 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_54_41_0.106514878572178_5.44557486206485_0.341444061219173 chr15 41725993 41726456 + 0.341444061219173 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -62771 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_49_45_-0.161263093904704_5.44293040910466_0.341444061219173-5 chr9 69442879 69443545 + 0.341444061219173 NA Intergenic IMPB_01|Satellite|Satellite -10471 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_54_41_0.106514878572178_5.44557486206485_0.341444061219173 chr13 49316998 49317384 + 0.341444061219173 NA Intergenic Intergenic -7983 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_49_45_-0.161263093904704_5.44293040910466_0.341444061219173 chr12 17220952 17221491 + 0.341444061219173 NA Intergenic Intergenic -44333 NM_201531 382571 Mm.40173 NM_201531 ENSMUSG00000051726 Kcnf1 Gm1182|Kv5.1 potassium voltage-gated channel, subfamily F, member 1 protein-coding common_peak1_121_94_0.0702454813986844_6.60497834903029_0.34133178638415-2 chr2 126875194 126876836 + 0.34133178638415 NA 5' UTR (NM_021450, exon 1 of 39) 5' UTR (NM_021450, exon 1 of 39) 246 NM_001164325 58800 Mm.244705 NM_021450 ENSMUSG00000027365 Trpm7 2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK transient receptor potential cation channel, subfamily M, member 7 protein-coding common_peak1_121_94_0.0702454813986844_6.60497834903029_0.34133178638415 chr11 77763340 77764696 + 0.34133178638415 NA Intergenic Intergenic -13217 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_114_100_-0.102756261774906_6.60683335186434_0.341331786384126-2 chr3 121953380 121954498 + 0.341331786384126 NA intron (NM_172525, intron 1 of 22) intron (NM_172525, intron 1 of 22) 710 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_114_100_-0.102756261774906_6.60683335186434_0.341331786384126 chr3 79989229 79990754 + 0.341331786384126 NA Intergenic Intergenic 104061 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_114_100_-0.102756261774906_6.60683335186434_0.341331786384126-2 chr19 12794513 12795425 + 0.341331786384126 NA intron (NM_053009, intron 1 of 10) CpG 1154 NR_024093 664779 Mm.290924 NM_001039718 ENSMUSG00000024695 Gm44505 Zfp91-Cntf|Zfp91Cntf predicted readthrough transcript (NMD candidate), 44505 ncRNA common_peak1_114_100_-0.102756261774906_6.60683335186434_0.341331786384126 chr13 32493498 32495163 + 0.341331786384126 NA Intergenic Intergenic -155786 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_84_65_0.0780386571586327_6.08341344793777_0.341251646259207-3 chr5 96997811 96998842 + 0.341251646259207 NA intron (NM_080708, intron 1 of 15) intron (NM_080708, intron 1 of 15) 637 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak1_84_65_0.0780386571586327_6.08341344793777_0.341251646259207 chr9 62980063 62980850 + 0.341251646259207 NA intron (NM_019663, intron 1 of 13) CpG 423 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak2_84_65_0.0780386571586327_6.08341344793777_0.341251646259207 chr18 73702931 73704271 + 0.341251646259207 NA promoter-TSS (NR_155448) promoter-TSS (NR_155448) 140 NM_008540 17128 Mm.100399 NM_008540 ENSMUSG00000024515 Smad4 AW743858|D18Wsu70e|DPC4|Madh4 SMAD family member 4 protein-coding common_peak2_84_65_0.0780386571586327_6.08341344793777_0.341251646259207-4 chr8 84857025 84857560 + 0.341251646259207 NA intron (NR_152751, intron 1 of 12) intron (NR_152751, intron 1 of 12) 306 NM_025648 66590 Mm.292517 NM_025648 ENSMUSG00000003808 Farsa 0610012A19Rik|Farsla|pheRS phenylalanyl-tRNA synthetase, alpha subunit protein-coding common_peak2_84_65_0.0780386571586327_6.08341344793777_0.341251646259207-2 chr2 93907318 93908348 + 0.341251646259207 NA Intergenic Intergenic -38676 NM_001033452 381411 Mm.9889 NM_001033452 ENSMUSG00000075023 Accsl Gm1967 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like protein-coding unique_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-2 chr7 126897497 126898127 + 0.340939137447793 NA intron (NM_026827, intron 1 of 5) intron (NM_026827, intron 1 of 5) 466 NM_026827 68742 Mm.248646 NM_026827 ENSMUSG00000060538 Tmem219 1110032O16Rik|2900045G02Rik|IGFBP-3R transmembrane protein 219 protein-coding unique_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-2 chr16 45964159 45964856 + 0.340939137447793 NA 3' UTR (NM_001134480, exon 4 of 4) 3' UTR (NM_001134480, exon 4 of 4) 18901 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-3 chr16 8848982 8849512 + 0.340939137447793 NA intron (NM_001081400, intron 3 of 3) intron (NM_001081400, intron 3 of 3) 19147 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-3 chr16 20611686 20612089 + 0.340939137447793 NA intron (NM_025462, intron 1 of 2) intron (NM_025462, intron 1 of 2) 286 NM_025462 110599566 Mm.263319 NM_025462 Eef1akmt4 - eukaryotic translation elongation factor 1 alpha lysine specific methyltransferase 4 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-12 chr5 112324151 112324517 + 0.340939137447793 NA Intergenic B1_Mur2|SINE|Alu -2035 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-4 chr16 29734185 29734778 + 0.340939137447793 NA Intergenic Intergenic 155147 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-6 chr2 34753730 34754142 + 0.340939137447793 NA intron (NR_151469, intron 2 of 26) CpG 1296 NM_001356441 66691 Mm.156452 NM_025709 ENSMUSG00000026867 Gapvd1 2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521 GTPase activating protein and VPS9 domains 1 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-9 chr3 135674272 135674692 + 0.340939137447793 NA intron (NM_008689, intron 1 of 24) (GA)n|Simple_repeat|Simple_repeat 17065 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-6 chr5 35105380 35105732 + 0.340939137447793 NA exon (NM_013587, exon 1 of 8) exon (NM_013587, exon 1 of 8) 141 NM_013587 16976 Mm.277661 NM_013587 ENSMUSG00000029103 Lrpap1 AA617339|AI790446|AU042172|C77774|HBP44|RAP low density lipoprotein receptor-related protein associated protein 1 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-5 chr14 70766111 70766532 + 0.340939137447793 NA intron (NM_023045, intron 1 of 27) CpG 307 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|exp7 exportin 7 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-7 chr6 99520391 99520886 + 0.340939137447793 NA 5' UTR (NM_001347345, exon 1 of 20) 5' UTR (NM_001347345, exon 1 of 20) 355 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793 chr10 14189368 14189657 + 0.340939137447793 NA Intergenic Intergenic 223133 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-12 chr9 77172403 77172830 + 0.340939137447793 NA intron (NM_027150, intron 6 of 7) intron (NM_027150, intron 6 of 7) -126835 NR_136923 26944 Mm.23199 NM_012033 ENSMUSG00000032357 Tinag AI452335|TIN-ag tubulointerstitial nephritis antigen protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-9 chr7 43443722 43443986 + 0.340939137447793 NA promoter-TSS (NM_026695) promoter-TSS (NM_026695) -218 NM_026695 110826 Mm.30200 NM_026695 ENSMUSG00000004610 Etfb 0610009I16Rik|2810441H06Rik electron transferring flavoprotein, beta polypeptide protein-coding common_peak1_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-2 chr14 120375089 120375665 + 0.340939137447793 NA intron (NM_001360376, intron 2 of 8) intron (NM_001360376, intron 2 of 8) 68925 NM_001360376 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-8 chr2 173268779 173269322 + 0.340939137447793 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 7483 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-4 chr1 91800969 91801283 + 0.340939137447793 NA promoter-TSS (NM_007855) promoter-TSS (NM_007855) -335 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-2 chr18 56736908 56737343 + 0.340939137447793 NA intron (NM_010721, intron 5 of 10) RSINE1|SINE|B4 29312 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-12 chr9 110781415 110781875 + 0.340939137447793 NA Intergenic CpG -16540 NM_153099 235628 Mm.292285 NM_153099 ENSMUSG00000044664 Prss42 Tessp2 protease, serine 42 protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-8 chr7 127026058 127026416 + 0.340939137447793 NA exon (NM_010772, exon 1 of 5) exon (NM_010772, exon 1 of 5) 242 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-8 chr5 93104191 93104712 + 0.340939137447793 NA intron (NM_001009818, intron 1 of 9) Lx10|LINE|L1 11035 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-10 chr2 116979918 116980205 + 0.340939137447793 NA Intergenic Intergenic 79909 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-10 chr8 124722218 124722467 + 0.340939137447793 NA promoter-TSS (NM_001357355) promoter-TSS (NM_001357355) 203 NM_026855 68865 Mm.22779 NM_026855 ENSMUSG00000031982 Arv1 1110067L22Rik|AI461928|AW121084 ARV1 homolog, fatty acid homeostasis modulator protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-7 chr2 164074659 164075469 + 0.340939137447793 NA intron (NM_021420, intron 1 of 10) intron (NM_021420, intron 1 of 10) 886 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793 chr10 75222824 75223256 + 0.340939137447793 NA intron (NM_001145826, intron 2 of 18) intron (NM_001145826, intron 2 of 18) 10650 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-9 chr8 3500603 3500907 + 0.340939137447793 NA intron (NM_053177, intron 1 of 13) CpG 236 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793 chr1 91052467 91052801 + 0.340939137447793 NA promoter-TSS (NM_001310732) promoter-TSS (NM_001310732) -810 NM_001111311 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-11 chr2 148875031 148875390 + 0.340939137447793 NA exon (NM_009976, exon 1 of 3) exon (NM_009976, exon 1 of 3) 302 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-4 chr17 79350819 79351210 + 0.340939137447793 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 4077 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-5 chr16 86808341 86808855 + 0.340939137447793 NA Intergenic Intergenic -2085 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793 chr1 40269629 40270180 + 0.340939137447793 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 3318 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793 chr1 132341646 132342110 + 0.340939137447793 NA Intergenic Intergenic 25753 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-2 chr1 75247820 75248112 + 0.340939137447793 NA intron (NM_001359281, intron 21 of 22) intron (NM_001359281, intron 21 of 22) 11264 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding unique_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-2 chr3 52104480 52104982 + 0.340939137447793 NA 5' UTR (NM_001004176, exon 1 of 5) 5' UTR (NM_001004176, exon 1 of 5) 275 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-10 chr7 142085209 142085695 + 0.340939137447793 NA intron (NM_008748, intron 3 of 6) intron (NM_008748, intron 3 of 6) 9832 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-5 chr3 32737057 32737477 + 0.340939137447793 NA promoter-TSS (NM_029017) promoter-TSS (NM_029017) 204 NM_025316 66046 Mm.28058 NM_025316 ENSMUSG00000027673 Ndufb5 0610007D05Rik|AU015782|CI-SGDH|SGDH NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 protein-coding common_peak1_27_26_-0.223188408371543_4.6432932979777_0.340939137447793 chr11 96830211 96830442 + 0.340939137447793 NA promoter-TSS (NM_001130450) promoter-TSS (NM_001130450) -358 NM_008686 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding unique_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793 chr5 125052171 125052681 + 0.340939137447793 NA intron (NM_011424, intron 18 of 46) intron (NM_011424, intron 18 of 46) 48951 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-9 chr18 82492550 82492835 + 0.340939137447793 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 17569 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-11 chr8 126594245 126594453 + 0.340939137447793 NA promoter-TSS (NM_001164598) promoter-TSS (NM_001164598) -913 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-12 chr8 79491658 79492238 + 0.340939137447793 NA Intergenic Intergenic -92480 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-9 chr9 21265326 21265659 + 0.340939137447793 NA exon (NM_153583, exon 1 of 10) exon (NM_153583, exon 1 of 10) 207 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793 chr11 100850070 100850480 + 0.340939137447793 NA intron (NM_001113563, intron 1 of 18) CpG 310 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-10 chr4 41755648 41756201 + 0.340939137447793 NA promoter-TSS (NM_001302511) promoter-TSS (NM_001302511) -152 NR_155499 105247116 Mm.488220 NR_155499 Gm42274 - predicted gene, 42274 ncRNA common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-2 chr10 43478666 43479105 + 0.340939137447793 NA promoter-TSS (NM_199028) promoter-TSS (NM_199028) -255 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-2 chr13 36529229 36529628 + 0.340939137447793 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 205049 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-3 chr11 76622720 76623350 + 0.340939137447793 NA Intergenic CpG -45296 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-13 chr6 135064916 135065288 + 0.340939137447793 NA promoter-TSS (NM_181444) promoter-TSS (NM_181444) -560 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-3 chr18 70472563 70473014 + 0.340939137447793 NA promoter-TSS (NM_172967) promoter-TSS (NM_172967) 122 NM_001289650 170461 Mm.83623 NM_029019 ENSMUSG00000079608 Stard6 1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424 StAR-related lipid transfer (START) domain containing 6 protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-6 chr4 89349289 89349743 + 0.340939137447793 NA intron (NR_132431, intron 2 of 9) intron (NR_132431, intron 2 of 9) -38484 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-3 chr18 6515901 6516433 + 0.340939137447793 NA promoter-TSS (NM_007935) promoter-TSS (NM_007935) -59 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-8 chr16 17451263 17451802 + 0.340939137447793 NA promoter-TSS (NM_001277231) promoter-TSS (NM_001277231) -453 NM_001277231 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding unique_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793 chr1 166812543 166813165 + 0.340939137447793 NA Intergenic MIRb|SINE|MIR -131009 NM_001347135 240894 Mm.246610 NM_172844 ENSMUSG00000026560 Fmo9 4831428F09Rik flavin containing monooxygenase 9 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-11 chr4 141682774 141683455 + 0.340939137447793 NA TTS (NM_023544) TTS (NM_023544) 2602 NM_023544 69994 Mm.441022 NM_023544 ENSMUSG00000040715 Rsc1a1 1700027M01Rik|Rs1 regulatory solute carrier protein, family 1, member 1 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-14 chr9 44326543 44326963 + 0.340939137447793 NA promoter-TSS (NM_007875) promoter-TSS (NM_007875) -92 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-8 chr7 141476870 141477221 + 0.340939137447793 NA intron (NM_001252588, intron 1 of 7) intron (NM_001252588, intron 1 of 7) 665 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-7 chr16 16223925 16224277 + 0.340939137447793 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 10756 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-14 chrX 20662991 20663240 + 0.340939137447793 NA 5' UTR (NM_001136085, exon 1 of 26) 5' UTR (NM_001136085, exon 1 of 26) 219 NM_001136085 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-7 chr6 56832269 56832631 + 0.340939137447793 NA intron (NM_012056, intron 1 of 9) CpG 391 NM_012056 27055 Mm.20943 NM_012056 ENSMUSG00000029781 Fkbp9 1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS FK506 binding protein 9 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-2 chr11 4303603 4304080 + 0.340939137447793 NA Intergenic Intergenic 37045 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-5 chr18 53244991 53245519 + 0.340939137447793 NA promoter-TSS (NM_029394) promoter-TSS (NM_029394) -407 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-13 chr9 63941421 63941763 + 0.340939137447793 NA Intergenic Intergenic 80467 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-5 chr5 72856285 72856588 + 0.340939137447793 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 12012 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-3 chr1 82794157 82794578 + 0.340939137447793 NA Intergenic Intergenic -25911 NM_025453 66261 Mm.46325 NM_025453 ENSMUSG00000026149 Tm4sf20 1810018L02Rik transmembrane 4 L six family member 20 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-4 chr3 10366907 10367280 + 0.340939137447793 NA exon (NM_025519, exon 1 of 5) exon (NM_025519, exon 1 of 5) 120 NM_025519 66371 Mm.366147 NM_025519 ENSMUSG00000027536 Chmp4c 2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3 charged multivesicular body protein 4C protein-coding unique_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793 chr11 54101004 54101428 + 0.340939137447793 NA intron (NM_001136076, intron 1 of 15) CpG 292 NM_011031 18452 Mm.3705 NM_011031 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-11 chr9 103201737 103202134 + 0.340939137447793 NA exon (NM_009275, exon 1 of 7) exon (NM_009275, exon 1 of 7) 130 NM_009275 20818 Mm.273053 NM_009275 ENSMUSG00000032553 Srprb AA409543 signal recognition particle receptor, B subunit protein-coding common_peak2_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-4 chr19 46003702 46004012 + 0.340939137447793 NA exon (NM_176785, exon 1 of 1) exon (NM_176785, exon 1 of 1) 379 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 protein-coding common_peak2_31_23_0.138022563923395_4.65397378268285_0.340939137447793-6 chr14 122983467 122983804 + 0.340939137447793 NA promoter-TSS (NM_001360598) promoter-TSS (NM_001360598) -352 NR_153663 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding common_peak2_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-5 chr4 45514493 45514850 + 0.340939137447793 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 16157 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_30_23_0.0925420184048704_4.63123350992359_0.340939137447793-6 chr17 29347482 29347771 + 0.340939137447793 NA promoter-TSS (NM_001357762) promoter-TSS (NM_001357762) -299 NM_001357763 56462 Mm.3224 NM_019880 ENSMUSG00000024012 Mtch1 2310034O17Rik|AI255158|AU018396|C77849|PSAP mitochondrial carrier 1 protein-coding common_peak1_31_23_0.138022563923395_4.65397378268285_0.340939137447793-7 chr2 163355312 163355800 + 0.340939137447793 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 42417 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_27_26_-0.223188408371543_4.6432932979777_0.340939137447793-4 chr2 29060312 29060527 + 0.340939137447793 NA intron (NM_009442, intron 1 of 11) CpG 156 NM_009442 22130 Mm.252195 NM_009442 ENSMUSG00000026803 Ttf1 AV245725|TTF-1|TTF-I transcription termination factor, RNA polymerase I protein-coding common_peak2_115_101_-0.104567300167473_6.62014169188776_0.340920414422423 chr9 44722690 44724796 + 0.340920414422423 NA intron (NM_153537, intron 4 of 21) intron (NM_153537, intron 4 of 21) 11455 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_123_95_0.0784320592583816_6.62417853035035_0.340920414422423 chr17 66448223 66450438 + 0.340920414422423 NA exon (NM_001114098, exon 1 of 15) exon (NM_001114098, exon 1 of 15) 420 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_123_95_0.0784320592583816_6.62417853035035_0.340920414422423 chr17 84075068 84075938 + 0.340920414422423 NA Intergenic Intergenic -3157 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_158_137_-0.0889737788540979_7.06403756735112_0.340885553921865-2 chr6 91205019 91207075 + 0.340885553921865 NA Intergenic Intergenic -6717 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_158_137_-0.0889737788540979_7.06403756735112_0.340885553921865 chr4 63050734 63052386 + 0.340885553921865 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 85986 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_167_130_0.065001735335442_7.06592386920517_0.340885553921865 chr13 112463359 112464880 + 0.340885553921865 NA promoter-TSS (NM_010560) promoter-TSS (NM_010560) 49 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak1_158_137_-0.0889737788540979_7.06403756735112_0.340885553921865 chr10 77150274 77152112 + 0.340885553921865 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 15337 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_80_71_-0.116542548314698_6.11165372728496_0.340664206019335 chr11 3373526 3374289 + 0.340664206019335 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) -2503 NM_173053 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak1_86_66_0.0896594331469487_6.11091890703125_0.340664206019335-2 chr10 21785014 21785805 + 0.340664206019335 NA Intergenic Intergenic 94564 NR_045843 432436 Mm.244553 NM_001004162 ENSMUSG00000056716 Gm5420 EG432436 predicted gene 5420 ncRNA common_peak1_86_66_0.0896594331469487_6.11091890703125_0.340664206019335-3 chr3 53064265 53065528 + 0.340664206019335 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 23349 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_86_66_0.0896594331469487_6.11091890703125_0.340664206019335 chr1 95313342 95314545 + 0.340664206019335 NA exon (NM_026321, exon 1 of 3) exon (NM_026321, exon 1 of 3) 315 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding common_peak2_80_71_-0.116542548314698_6.11165372728496_0.340664206019335 chr11 101230522 101231470 + 0.340664206019335 NA Intergenic Intergenic -4533 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding common_peak2_80_71_-0.116542548314698_6.11165372728496_0.340664206019335-3 chr6 149309142 149310050 + 0.340664206019335 NA 5' UTR (NM_001289662, exon 1 of 5) 5' UTR (NM_001289662, exon 1 of 5) 182 NM_001289662 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak1_79_71_-0.134338017617126_6.10275599263375_0.340664206019335 chr1 135659839 135660643 + 0.340664206019335 NA Intergenic Intergenic -59822 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_80_71_-0.116542548314698_6.11165372728496_0.340664206019335-2 chr2 24918833 24919561 + 0.340664206019335 NA intron (NM_001012518, intron 1 of 26) CpG 412 NM_172545 77683 Mm.24176 NM_172545 ENSMUSG00000036893 Ehmt1 9230102N17Rik|D330003E03|Eu-HMTase1|GLP|GLP1|KMT1D|mKIAA1876 euchromatic histone methyltransferase 1 protein-coding common_peak2_79_71_-0.134338017617126_6.10275599263375_0.340664206019335 chr8 45019568 45020295 + 0.340664206019335 NA intron (NM_001081286, intron 8 of 25) intron (NM_001081286, intron 8 of 25) 45487 NR_033588 434310 Mm.334512 NR_033588 ENSMUSG00000066158 AY512931 - cDNA sequence AY512931 ncRNA common_peak1_86_66_0.0896594331469487_6.11091890703125_0.340664206019335-4 chr4 32800140 32800819 + 0.340664206019335 NA intron (NM_175364, intron 1 of 2) CpG 220 NM_175364 108755 Mm.1182 NM_175364 ENSMUSG00000045854 Lyrm2 2610208E05Rik LYR motif containing 2 protein-coding common_peak1_159_138_-0.0904090684715655_7.07373653848772_0.340589162902928 chr12 86823428 86825400 + 0.340589162902928 NA Intergenic Intergenic 60400 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-7 chr10 99232808 99233125 + 0.340565874754526 NA Intergenic Intergenic -30265 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-16 chr7 80079166 80079411 + 0.340565874754526 NA intron (NM_175433, intron 1 of 4) intron (NM_175433, intron 1 of 4) -4031 NR_045695 100859962 Mm.392575 NR_045695 ENSMUSG00000108714 Gm21057 - predicted gene, 21057 ncRNA unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-5 chr10 59638149 59638452 + 0.340565874754526 NA Intergenic Intergenic -21608 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-3 chr1 164888179 164888461 + 0.340565874754526 NA Intergenic Intergenic 25199 NR_040303 433374 Mm.251149 NR_040303 ENSMUSG00000104117 Gm20743 - predicted gene, 20743 ncRNA unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-27 chr6 72552471 72552686 + 0.340565874754526 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 2931 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-5 chr11 4578379 4578656 + 0.340565874754526 NA intron (NM_028860, intron 1 of 17) intron (NM_028860, intron 1 of 17) 16298 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-21 chr8 105340549 105340752 + 0.340565874754526 NA intron (NM_177699, intron 1 of 21) intron (NM_177699, intron 1 of 21) 7320 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-27 chr7 144578386 144578662 + 0.340565874754526 NA 3' UTR (NM_010175, exon 2 of 2) 3' UTR (NM_010175, exon 2 of 2) 3912 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-9 chr15 62325246 62325506 + 0.340565874754526 NA Intergenic Intergenic -105925 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-18 chr19 5427104 5427392 + 0.340565874754526 NA TTS (NM_001256515) TTS (NM_001256515) 2104 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-2 chr11 116106878 116107102 + 0.340565874754526 NA exon (NM_172570, exon 5 of 6) exon (NM_172570, exon 5 of 6) 3245 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-3 chr10 68156398 68156674 + 0.340565874754526 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 122190 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-23 chr7 63817231 63817590 + 0.340565874754526 NA Intergenic Intergenic -99447 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-15 chr15 11569791 11570137 + 0.340565874754526 NA Intergenic (TTTC)n|Simple_repeat|Simple_repeat -170306 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-13 chr6 52191473 52191664 + 0.340565874754526 NA exon (NM_008265, exon 1 of 2) exon (NM_008265, exon 1 of 2) 135 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-16 chr9 120014319 120014572 + 0.340565874754526 NA 3' UTR (NM_011724, exon 3 of 3) 3' UTR (NM_011724, exon 3 of 3) 9153 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-24 chr5 31864200 31864562 + 0.340565874754526 NA intron (NM_144541, intron 6 of 11) intron (NM_144541, intron 6 of 11) 166331 NM_144541 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Babam2 6030405P19Rik|AI429776|B830038C02Rik|Bre BRISC and BRCA1 A complex member 2 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-6 chr11 98193564 98193924 + 0.340565874754526 NA promoter-TSS (NM_134027) promoter-TSS (NM_134027) -451 NM_001080118 19014 Mm.12926 NM_013634 ENSMUSG00000018160 Med1 AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|TRIP-2|l11Jus15 mediator complex subunit 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-9 chr12 72484977 72485217 + 0.340565874754526 NA intron (NM_030070, intron 21 of 24) intron (NM_030070, intron 21 of 24) 42848 NM_001142729 78257 Mm.266280 NM_030070 ENSMUSG00000021090 Lrrc9 4921529O18Rik|4930432K16Rik leucine rich repeat containing 9 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-4 chr12 16831649 16831879 + 0.340565874754526 NA Intergenic Intergenic 20799 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526 chr1 40413989 40414227 + 0.340565874754526 NA Intergenic Intergenic -15462 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-9 chr4 156128379 156128644 + 0.340565874754526 NA 5' UTR (NM_001220499, exon 1 of 2) 5' UTR (NM_001220499, exon 1 of 2) 1023 NM_001220499 100045778 NM_001220499 ENSMUSG00000110404 Rnf223 9930005F22Rik ring finger 223 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-3 chr10 61696112 61696396 + 0.340565874754526 NA exon (NM_001272090, exon 1 of 4) exon (NM_001272090, exon 1 of 4) 668 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-14 chr13 85507987 85508263 + 0.340565874754526 NA Intergenic Intergenic -218639 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-7 chr15 84669295 84669514 + 0.340565874754526 NA intron (NM_001346662, intron 1 of 8) intron (NM_001346662, intron 1 of 8) 6198 NM_001346662 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-15 chr15 98527424 98527748 + 0.340565874754526 NA intron (NR_153345, intron 6 of 10) intron (NR_153345, intron 6 of 10) -1127 NR_034052 100217416 Mm.296240 NR_034052 ENSMUSG00000065939 Snora2b MBI-137 small nucleolar RNA, H/ACA box 2B snoRNA unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-6 chr13 30726548 30726749 + 0.340565874754526 NA Intergenic Intergenic -22585 NM_001347508 16364 Mm.4677 NM_013674 ENSMUSG00000021356 Irf4 AI385587|IRF-4|LSIRF|NF-EM5|Spip interferon regulatory factor 4 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-7 chr16 43700617 43700892 + 0.340565874754526 NA Intergenic Intergenic -36570 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526 chr1 30875805 30876079 + 0.340565874754526 NA Intergenic Intergenic -12686 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik PHD finger protein 3 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-11 chr4 11763852 11764052 + 0.340565874754526 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 5795 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-14 chr9 58297184 58297444 + 0.340565874754526 NA intron (NM_010729, intron 2 of 6) intron (NM_010729, intron 2 of 6) 15898 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-8 chr12 34075749 34075956 + 0.340565874754526 NA intron (NM_001271386, intron 27 of 27) intron (NM_001271386, intron 27 of 27) 118181 NM_011658 22160 Mm.3280 NM_011658 ENSMUSG00000035799 Twist1 M-Twist|Pde|Ska10|Ska|Twist|bHLHa38|pdt twist basic helix-loop-helix transcription factor 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-29 chr9 108798143 108798398 + 0.340565874754526 NA intron (NM_029634, intron 2 of 5) intron (NM_029634, intron 2 of 5) 2276 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-26 chr6 38927030 38927397 + 0.340565874754526 NA intron (NM_011539, intron 1 of 12) MARNA|DNA|TcMar-Mariner 8227 NM_011539 21391 Mm.4054 NM_011539 ENSMUSG00000029925 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-30 chrX 8144899 8145106 + 0.340565874754526 NA promoter-TSS (NR_033561) promoter-TSS (NR_033561) -425 NR_033561 70226 Mm.391639 NR_033561 ENSMUSG00000055188 Rbm3os 2900002K06Rik RNA binding motif protein 3, opposite strand ncRNA unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-22 chr3 154693495 154693687 + 0.340565874754526 NA Intergenic Intergenic -17542 NM_175176 209601 Mm.331454 NM_175176 ENSMUSG00000078161 Erich3 1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133 glutamate rich 3 protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-7 chr13 75739576 75739778 + 0.340565874754526 NA intron (NM_138953, intron 2 of 11) intron (NM_138953, intron 2 of 11) 32193 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-2 chr10 80348228 80348484 + 0.340565874754526 NA promoter-TSS (NM_001285435) promoter-TSS (NM_001285435) 92 NM_001285435 66548 Mm.71891 NM_025629 ENSMUSG00000043822 Adamtsl5 2010109H09Rik|Thsd6 ADAMTS-like 5 protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-7 chr6 82888592 82888891 + 0.340565874754526 NA Intergenic Intergenic -6888 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-3 chr10 4277877 4278121 + 0.340565874754526 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 11670 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-20 chr3 68609184 68609493 + 0.340565874754526 NA intron (NM_001113421, intron 3 of 7) RSINE1|SINE|B4 36970 NM_013928 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-6 chr14 56690588 56690819 + 0.340565874754526 NA intron (NR_153396, intron 9 of 12) intron (NR_153396, intron 9 of 12) 10297 NR_046209 100503823 Mm.474486 NR_046209 Gm16973 - predicted gene, 16973 ncRNA unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-11 chr6 134276410 134276711 + 0.340565874754526 NA Intergenic Intergenic -119769 NM_025778 66813 Mm.474472 NM_025778 ENSMUSG00000030200 Bcl2l14 4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg BCL2-like 14 (apoptosis facilitator) protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-6 chr4 7670932 7671209 + 0.340565874754526 NA Intergenic Intergenic 110382 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-9 chr18 38297712 38297916 + 0.340565874754526 NA intron (NM_001361267, intron 2 of 9) intron (NM_001361267, intron 2 of 9) 1009 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-8 chr3 4689894 4690096 + 0.340565874754526 NA Intergenic Intergenic -108713 NR_045272 100503859 Mm.75172 NR_045272 ENSMUSG00000098659 1110015O18Rik - RIKEN cDNA 1110015O18 gene ncRNA common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-11 chr4 62638179 62638372 + 0.340565874754526 NA intron (NM_019492, intron 16 of 19) intron (NM_019492, intron 16 of 19) 18603 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-10 chr3 122042806 122043036 + 0.340565874754526 NA Intergenic Intergenic -1539 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding unique_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-2 chr12 33235064 33235294 + 0.340565874754526 NA intron (NM_028139, intron 3 of 3) intron (NM_028139, intron 3 of 3) -67336 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-25 chr5 135169908 135170178 + 0.340565874754526 NA intron (NM_009745, intron 1 of 5) intron (NM_009745, intron 1 of 5) 1671 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-29 chr8 79139532 79139732 + 0.340565874754526 NA intron (NM_001294279, intron 8 of 14) intron (NM_001294279, intron 8 of 14) 108951 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526 chr1 179055113 179055329 + 0.340565874754526 NA intron (NM_027188, intron 8 of 11) intron (NM_027188, intron 8 of 11) 462820 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-13 chr13 60863840 60864131 + 0.340565874754526 NA intron (NM_178098, intron 1 of 7) intron (NM_178098, intron 1 of 7) 431 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-28 chr9 108094208 108094442 + 0.340565874754526 NA exon (NM_146226, exon 2 of 22) exon (NM_146226, exon 2 of 22) 155 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-14 chr7 99355381 99355697 + 0.340565874754526 NA Intergenic Intergenic -2300 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-19 chr7 41499128 41499348 + 0.340565874754526 NA intron (NM_001033530, intron 1 of 3) intron (NM_001033530, intron 1 of 3) 652 NM_001033530 101835 Mm.370336 NM_001033530 ENSMUSG00000074166 AW146154 AI451288 expressed sequence AW146154 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-21 chr5 29845518 29845756 + 0.340565874754526 NA Intergenic Intergenic -109701 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-10 chr12 110204460 110204677 + 0.340565874754526 NA Intergenic Intergenic -46495 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-14 chr15 3877696 3878037 + 0.340565874754526 NA Intergenic Intergenic 101707 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-11 chr13 95525485 95525734 + 0.340565874754526 NA promoter-TSS (NM_007974) promoter-TSS (NM_007974) -369 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-5 chr15 36189826 36190092 + 0.340565874754526 NA intron (NM_012031, intron 4 of 18) intron (NM_012031, intron 4 of 18) 10429 NM_012031 26942 Mm.295539 NM_012031 ENSMUSG00000037617 Spag1 tpis sperm associated antigen 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-3 chr10 17102996 17103342 + 0.340565874754526 NA Intergenic Intergenic -7387 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-13 chr5 74161364 74161553 + 0.340565874754526 NA Intergenic Intergenic -33868 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-4 chr4 134630913 134631239 + 0.340565874754526 NA intron (NM_207237, intron 2 of 11) RMER15|LTR|ERVL -63225 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-5 chr10 93357977 93358176 + 0.340565874754526 NA Intergenic Intergenic 21865 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-26 chr6 134865890 134866357 + 0.340565874754526 NA Intergenic Intergenic 21662 NR_074084 14760 Mm.4787 NM_008157 ENSMUSG00000032641 Gpr19 - G protein-coupled receptor 19 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-11 chr3 79994356 79994655 + 0.340565874754526 NA Intergenic Intergenic 108575 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-2 chr1 169695806 169696052 + 0.340565874754526 NA TTS (NM_009063) TTS (NM_009063) 40428 NM_009063 19737 Mm.20954 NM_009063 ENSMUSG00000026678 Rgs5 1110070A02Rik regulator of G-protein signaling 5 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-8 chr18 57030156 57030379 + 0.340565874754526 NA Intergenic Intergenic -54888 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-17 chr16 38118841 38119163 + 0.340565874754526 NA intron (NM_001347232, intron 1 of 11) intron (NM_001347232, intron 1 of 11) -29742 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-17 chr5 143048299 143048574 + 0.340565874754526 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 64584 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-11 chr4 129034749 129034978 + 0.340565874754526 NA Intergenic Intergenic -23408 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-8 chr2 152824980 152825253 + 0.340565874754526 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 3373 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-6 chr6 72681893 72682171 + 0.340565874754526 NA intron (NM_001079822, intron 3 of 12) intron (NM_001079822, intron 3 of 12) 52201 NR_040421 100038714 Mm.321330 NR_040421 Gm15401 - predicted gene 15401 ncRNA unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-31 chr9 95188502 95188810 + 0.340565874754526 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 218614 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-20 chr7 112296696 112297077 + 0.340565874754526 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 71050 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-13 chr15 10706602 10706868 + 0.340565874754526 NA intron (NM_001166408, intron 1 of 17) intron (NM_001166408, intron 1 of 17) 6805 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526 chr1 177794421 177794735 + 0.340565874754526 NA intron (NM_007422, intron 1 of 12) intron (NM_007422, intron 1 of 12) 1931 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-13 chr5 117358504 117358729 + 0.340565874754526 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 1311 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-21 chr4 43407439 43407755 + 0.340565874754526 NA intron (NM_199057, intron 1 of 11) intron (NM_199057, intron 1 of 11) 1095 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-9 chr8 35708191 35708447 + 0.340565874754526 NA Intergenic Intergenic 118240 NM_027998 71908 Mm.37817 NM_027998 ENSMUSG00000055976 Cldn23 2310014B08Rik claudin 23 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-12 chr13 37943183 37943416 + 0.340565874754526 NA intron (NM_001177869, intron 10 of 11) intron (NM_001177869, intron 10 of 11) 50909 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-2 chr13 93192555 93192795 + 0.340565874754526 NA promoter-TSS (NM_133905) promoter-TSS (NM_133905) -258 NM_001361537 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526 chr1 74058114 74058313 + 0.340565874754526 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 66234 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-3 chr12 17992977 17993263 + 0.340565874754526 NA Intergenic CpG 302311 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-8 chr11 17170148 17170423 + 0.340565874754526 NA intron (NM_024459, intron 1 of 5) intron (NM_024459, intron 1 of 5) 10987 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-18 chr6 72488104 72488332 + 0.340565874754526 NA Intergenic Intergenic -48660 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-8 chr11 61970637 61970943 + 0.340565874754526 NA intron (NM_001310526, intron 1 of 7) B1_Mur2|SINE|Alu 14027 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-4 chr10 75070659 75070929 + 0.340565874754526 NA intron (NM_001081412, intron 1 of 22) B4|SINE|B4 9898 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-13 chr4 134668323 134668579 + 0.340565874754526 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 35839 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-8 chr17 35059416 35059619 + 0.340565874754526 NA TTS (NM_033444) TTS (NM_033444) 482 NM_016765 51793 Mm.1457 NM_016765 ENSMUSG00000007039 Ddah2 1110003M04Rik|AU019324|AW413173|DDAH-2|DDAHII|Ddah|G6a|NG30 dimethylarginine dimethylaminohydrolase 2 protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-3 chr10 81344480 81344712 + 0.340565874754526 NA Intergenic B2_Mm2|SINE|B2 -1330 NM_148951 209047 Mm.218755 NM_148951 ENSMUSG00000034872 Gipc3 Ahl5|Rgs19ip3 GIPC PDZ domain containing family, member 3 protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-5 chr5 123058162 123058411 + 0.340565874754526 NA Intergenic Intergenic -11270 NM_001347456 74890 Mm.141383 NM_029112 ENSMUSG00000029477 Morn3 4930438O03Rik MORN repeat containing 3 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-4 chr12 41024518 41024736 + 0.340565874754526 NA 5' UTR (NM_053122, exon 2 of 7) 5' UTR (NM_053122, exon 2 of 7) 537 NM_053122 93757 Mm.363813 NM_053122 ENSMUSG00000056899 Immp2l AI853880|IMP2|Tg(HLA-A/H2-D)2Enge IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526 chr1 192858967 192859327 + 0.340565874754526 NA Intergenic Intergenic -3395 NM_198247 214791 Mm.22806 NM_198247 ENSMUSG00000016262 Sertad4 4833404A09|C130018M11Rik SERTA domain containing 4 protein-coding unique_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-3 chr2 68086208 68086527 + 0.340565874754526 NA Intergenic Intergenic -18305 NM_020283 26877 Mm.226435 NM_020283 ENSMUSG00000034780 B3galt1 beta3Gal-T1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-7 chr5 3322379 3322656 + 0.340565874754526 NA Intergenic Intergenic -21376 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-24 chr7 110715932 110716157 + 0.340565874754526 NA Intergenic Intergenic -52162 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-24 chr5 114721523 114721838 + 0.340565874754526 NA 3' UTR (NM_029992, exon 13 of 13) 3' UTR (NM_029992, exon 13 of 13) 2165 NR_105995 102465622 NR_105995 ENSMUSG00000098656 Mir7028 Gm27674|mmu-mir-7028 microRNA 7028 ncRNA common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-14 chr7 35396344 35396619 + 0.340565874754526 NA promoter-TSS (NM_028120) promoter-TSS (NM_028120) 286 NM_178643 101831 Mm.389855 NM_178643 ENSMUSG00000030493 Faap24 AW124591|AW538696|C230052I12Rik Fanconi anemia core complex associated protein 24 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-27 chr8 113635106 113635311 + 0.340565874754526 NA promoter-TSS (NM_173015) promoter-TSS (NM_173015) -378 NM_001048143 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-3 chr10 80348225 80348466 + 0.340565874754526 NA intron (NR_104340, intron 1 of 11) intron (NR_104340, intron 1 of 11) 103 NM_001285435 66548 Mm.71891 NM_025629 ENSMUSG00000043822 Adamtsl5 2010109H09Rik|Thsd6 ADAMTS-like 5 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-5 chr14 76616889 76617240 + 0.340565874754526 NA Intergenic Intergenic -60175 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-4 chr11 53567559 53567796 + 0.340565874754526 NA intron (NM_008443, intron 1 of 17) CpG 308 NM_001290806 16568 Mm.88694 NM_008443 ENSMUSG00000018395 Kif3a Kif3|Kifl|Kns3 kinesin family member 3A protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-7 chr16 31606375 31606579 + 0.340565874754526 NA Intergenic Intergenic -11656 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-6 chr15 62333355 62333604 + 0.340565874754526 NA Intergenic Intergenic -114028 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-12 chr5 104424873 104425136 + 0.340565874754526 NA Intergenic Intergenic -10107 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-4 chr11 79639643 79639874 + 0.340565874754526 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -16595 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526 chr1 89111364 89111577 + 0.340565874754526 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 41055 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-16 chr5 36188882 36189142 + 0.340565874754526 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -15009 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-20 chr3 60516207 60516495 + 0.340565874754526 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 15172 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-3 chr16 32278225 32278459 + 0.340565874754526 NA exon (NM_027355, exon 1 of 6) exon (NM_027355, exon 1 of 6) 881 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526 chr1 89466654 89467050 + 0.340565874754526 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 12041 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-32 chrX 136271529 136271793 + 0.340565874754526 NA exon (NM_009750, exon 3 of 3) exon (NM_009750, exon 3 of 3) 1408 NM_001110234 12070 Mm.90787 NM_009750 ENSMUSG00000046432 Bex3 AL033356|DXWsu67e|Gcap27|Nade|Ngfrap1 brain expressed X-linked 3 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-13 chr6 97872023 97872280 + 0.340565874754526 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) -57666 NM_001178049 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-8 chr5 143637409 143637671 + 0.340565874754526 NA intron (NM_011182, intron 1 of 12) intron (NM_011182, intron 1 of 12) -13701 NM_001163548 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-5 chr12 84907525 84907737 + 0.340565874754526 NA Intergenic Intergenic -31136 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-16 chr16 32638839 32639124 + 0.340565874754526 NA Intergenic Intergenic -5662 NM_001110147 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526 chr1 40273055 40273297 + 0.340565874754526 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 6590 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-9 chr12 70694789 70694997 + 0.340565874754526 NA Intergenic MIRc|SINE|MIR -130621 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-23 chr5 92603234 92603466 + 0.340565874754526 NA intron (NM_175096, intron 1 of 1) CpG 299 NM_175096 52331 Mm.21965 NM_175096 ENSMUSG00000047963 Stbd1 D530019K15Rik|D5Ertd593e starch binding domain 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-10 chr11 115840132 115840392 + 0.340565874754526 NA intron (NM_001252532, intron 2 of 25) intron (NM_001252532, intron 2 of 25) 16204 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-12 chr2 131504114 131504321 + 0.340565874754526 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 12355 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-19 chr3 54401620 54401820 + 0.340565874754526 NA Intergenic Intergenic 40613 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-3 chr10 86777912 86778235 + 0.340565874754526 NA promoter-TSS (NM_175331) promoter-TSS (NM_175331) -932 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-5 chr5 92989476 92989698 + 0.340565874754526 NA Intergenic Intergenic 55435 NM_175270 78088 Mm.245085 NM_175270 ENSMUSG00000045314 Sowahb 5730467H21Rik|Ankrd56 sosondowah ankyrin repeat domain family member B protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-26 chr8 91441737 91442020 + 0.340565874754526 NA intron (NM_011936, intron 4 of 8) intron (NM_011936, intron 4 of 8) 128353 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-19 chr3 101597604 101597841 + 0.340565874754526 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 6985 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-2 chr10 95564389 95564603 + 0.340565874754526 NA promoter-TSS (NM_027722) promoter-TSS (NM_027722) -350 NM_001358996 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP-2|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-7 chr15 79399725 79400091 + 0.340565874754526 NA intron (NM_172608, intron 1 of 8) intron (NM_172608, intron 1 of 8) 3011 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-12 chr13 113258645 113258964 + 0.340565874754526 NA Intergenic Intergenic 49145 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-15 chr4 149166936 149167151 + 0.340565874754526 NA promoter-TSS (NM_001356332) promoter-TSS (NM_001356332) -338 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-9 chr6 83079000 83079194 + 0.340565874754526 NA intron (NM_197992, intron 2 of 8) intron (NM_197992, intron 2 of 8) 707 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-8 chr14 121823052 121823285 + 0.340565874754526 NA Intergenic Intergenic -25434 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-17 chr9 120577506 120577805 + 0.340565874754526 NA non-coding (NR_073359, exon 1 of 1) non-coding (NR_073359, exon 1 of 1) 324 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-4 chr10 61146054 61146366 + 0.340565874754526 NA intron (NM_009163, intron 2 of 14) intron (NM_009163, intron 2 of 14) 1474 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-4 chr10 58361322 58361561 + 0.340565874754526 NA intron (NM_001359116, intron 1 of 9) intron (NM_001359116, intron 1 of 9) 9478 NM_001359116 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-6 chr10 96648853 96649091 + 0.340565874754526 NA Intergenic Intergenic 31971 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-6 chr10 78336531 78336765 + 0.340565874754526 NA intron (NM_053014, intron 1 of 9) intron (NM_053014, intron 1 of 9) 3559 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-4 chr1 183220516 183220857 + 0.340565874754526 NA intron (NM_001278219, intron 1 of 8) intron (NM_001278219, intron 1 of 8) 843 NM_026866 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-17 chr17 29439716 29439955 + 0.340565874754526 NA Intergenic B1_Mus1|SINE|Alu -51210 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-6 chr11 118348681 118348880 + 0.340565874754526 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) -6246 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-10 chr6 106768695 106768908 + 0.340565874754526 NA promoter-TSS (NM_027296) promoter-TSS (NM_027296) -337 NM_001242358 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-22 chr5 145191678 145191945 + 0.340565874754526 NA promoter-TSS (NM_020582) promoter-TSS (NM_020582) -219 NM_020582 57423 Mm.133551 NM_020582 ENSMUSG00000038690 Atp5j2 1110019H14Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-11 chr2 128545091 128545313 + 0.340565874754526 NA Intergenic Intergenic -47139 NM_001310641 241634 Mm.297682 NM_001310641 ENSMUSG00000074812 Spdye4c Gm355|SpeedyB3|SpyB3 speedy/RINGO cell cycle regulator family, member E4C protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-3 chr11 83891743 83892080 + 0.340565874754526 NA intron (NM_009330, intron 6 of 8) B1_Mus1|SINE|Alu 38951 NM_001291269 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526 chr1 134102732 134103000 + 0.340565874754526 NA Intergenic Intergenic -8376 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-15 chr15 51990317 51990528 + 0.340565874754526 NA intron (NM_009009, intron 1 of 13) intron (NM_009009, intron 1 of 13) 1338 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-10 chr3 54431143 54431443 + 0.340565874754526 NA Intergenic Intergenic 70186 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-5 chr11 75454832 75455035 + 0.340565874754526 NA promoter-TSS (NM_138950) promoter-TSS (NM_138950) -216 NM_138950 192652 Mm.340378 NM_138950 ENSMUSG00000045374 Wdr81 BC054822|Gm883|mFLJ00182|nur5 WD repeat domain 81 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-23 chr4 139594983 139595207 + 0.340565874754526 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 20375 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-18 chr2 148293503 148293709 + 0.340565874754526 NA Intergenic Intergenic -101771 NM_009219 20608 Mm.35324 NM_009219 ENSMUSG00000037014 Sstr4 Smstr4|sst4 somatostatin receptor 4 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-11 chr13 5893600 5893821 + 0.340565874754526 NA Intergenic Intergenic 32221 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-19 chr2 72316053 72316265 + 0.340565874754526 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 30458 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-10 chr6 137648961 137649152 + 0.340565874754526 NA 5' UTR (NM_001271588, exon 1 of 21) 5' UTR (NM_001271588, exon 1 of 21) 229 NM_001271588 13860 Mm.235346 NM_007945 ENSMUSG00000015766 Eps8 AW261790 epidermal growth factor receptor pathway substrate 8 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-12 chr5 135912712 135912930 + 0.340565874754526 NA intron (NM_018871, intron 1 of 1) intron (NM_018871, intron 1 of 1) 21820 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-10 chr12 79551314 79551514 + 0.340565874754526 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 254063 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-5 chr11 102948839 102949101 + 0.340565874754526 NA Intergenic Intergenic -2509 NM_011795 23829 Mm.57154 NM_011795 ENSMUSG00000045532 C1ql1 C1qrf|CRF|CTRP14|gliacolin complement component 1, q subcomponent-like 1 protein-coding unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-13 chr8 27108129 27108351 + 0.340565874754526 NA intron (NM_054044, intron 2 of 18) intron (NM_054044, intron 2 of 18) 20392 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-14 chr15 11796006 11796249 + 0.340565874754526 NA Intergenic Intergenic 109547 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-15 chr6 145074897 145075150 + 0.340565874754526 NA intron (NM_007532, intron 1 of 10) GA-rich|Low_complexity|Low_complexity 1134 NM_007532 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-12 chr4 137287637 137287839 + 0.340565874754526 NA intron (NM_009523, intron 1 of 4) intron (NM_009523, intron 1 of 4) 10103 NM_009523 22417 Mm.20355 NM_009523 ENSMUSG00000036856 Wnt4 Wnt-4 wingless-type MMTV integration site family, member 4 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-22 chr8 122179598 122179837 + 0.340565874754526 NA Intergenic Intergenic -102424 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-6 chr15 74621618 74621826 + 0.340565874754526 NA intron (NM_001177437, intron 11 of 26) ORR1F|LTR|ERVL-MaLR 14596 NM_001177437 69439 Mm.263708 NM_001177437 ENSMUSG00000022603 Mroh4 1700016M24Rik maestro heat-like repeat family member 4 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-30 chr8 84847216 84847403 + 0.340565874754526 NA promoter-TSS (NM_007591) promoter-TSS (NM_007591) -378 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-23 chr9 47446605 47446837 + 0.340565874754526 NA Intergenic Intergenic -83449 NM_001310841 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-9 chr2 9483245 9483528 + 0.340565874754526 NA Intergenic Intergenic 293871 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-16 chr16 86644217 86644509 + 0.340565874754526 NA Intergenic Intergenic 162150 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-15 chr9 124278491 124278750 + 0.340565874754526 NA Intergenic Intergenic 34074 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-14 chr4 134762227 134762464 + 0.340565874754526 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 5659 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-18 chr3 35933745 35934062 + 0.340565874754526 NA promoter-TSS (NM_001205361) promoter-TSS (NM_001205361) -937 NM_001205361 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-2 chr10 24581374 24581578 + 0.340565874754526 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -13966 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-10 chr2 117712623 117712840 + 0.340565874754526 NA Intergenic Intergenic 100071 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-18 chrX 75382570 75382802 + 0.340565874754526 NA intron (NM_026126, intron 1 of 4) intron (NM_026126, intron 1 of 4) 287 NM_026126 67391 Mm.126404 NM_026126 ENSMUSG00000031198 Fundc2 4833415N24Rik|DC44|HCBP6 FUN14 domain containing 2 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-7 chr10 95194411 95194677 + 0.340565874754526 NA intron (NM_001330138, intron 2 of 2) intron (NM_001330138, intron 2 of 2) -48719 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-9 chr2 125540885 125541168 + 0.340565874754526 NA Intergenic Intergenic -34588 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-30 chr8 27140266 27140497 + 0.340565874754526 NA 3' UTR (NM_001080813, exon 6 of 6) 3' UTR (NM_001080813, exon 6 of 6) -2529 NR_045840 71082 Mm.395259 NR_045840 4933416M07Rik - RIKEN cDNA 4933416M07 gene ncRNA common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-4 chr11 49091648 49091868 + 0.340565874754526 NA intron (NM_008330, intron 1 of 1) B3|SINE|B2 4741 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-2 chr1 193569469 193569679 + 0.340565874754526 NA Intergenic Intergenic -62044 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-9 chr3 53152080 53152330 + 0.340565874754526 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 110658 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-8 chr6 82997990 82998280 + 0.340565874754526 NA intron (NM_033079, intron 4 of 9) intron (NM_033079, intron 4 of 9) 35336 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-22 chr4 129205415 129205735 + 0.340565874754526 NA intron (NM_134151, intron 4 of 12) intron (NM_134151, intron 4 of 12) 15780 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-10 chr16 45377765 45377971 + 0.340565874754526 NA Intergenic Intergenic 31185 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-7 chr11 121746605 121746888 + 0.340565874754526 NA Intergenic Intergenic 44319 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding unique_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526 chr1 186456672 186457041 + 0.340565874754526 NA Intergenic Intergenic 101825 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-4 chr11 96788719 96788974 + 0.340565874754526 NA promoter-TSS (NM_007622) promoter-TSS (NM_007622) -290 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-14 chr6 91200401 91200651 + 0.340565874754526 NA Intergenic Intergenic -12238 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-31 chrX 56455486 56455703 + 0.340565874754526 NA intron (NM_172779, intron 2 of 16) CpG-15696 755 NM_172779 236790 Mm.474772 NM_172779 ENSMUSG00000035967 Ints6l 4930535D10Rik|6330505F04Rik|D130066O12|Ddx26b integrator complex subunit 6 like protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-15 chr7 58657624 58657998 + 0.340565874754526 NA promoter-TSS (NM_009728) promoter-TSS (NM_009728) -391 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-2 chr1 91077316 91077509 + 0.340565874754526 NA intron (NM_008515, intron 4 of 22) intron (NM_008515, intron 4 of 22) 23968 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-2 chr10 17037392 17037686 + 0.340565874754526 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 58243 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-21 chr3 129533024 129533332 + 0.340565874754526 NA promoter-TSS (NR_153368) promoter-TSS (NR_153368) -790 NR_153368 102639747 Mm.393257 NR_153368 Gm35986 - predicted gene, 35986 ncRNA unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-2 chr1 150144854 150145077 + 0.340565874754526 NA Intergenic Intergenic 19983 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-25 chr8 26890781 26891054 + 0.340565874754526 NA Intergenic Intergenic -66494 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA unique_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-12 chr7 49762294 49762577 + 0.340565874754526 NA intron (NM_001146053, intron 3 of 5) intron (NM_001146053, intron 3 of 5) 2923 NM_001146052 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-31 chr8 105960010 105960340 + 0.340565874754526 NA intron (NR_045594, intron 2 of 23) intron (NR_045594, intron 2 of 23) 5940 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-5 chr13 32913093 32913318 + 0.340565874754526 NA Intergenic Intergenic -15065 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-8 chr18 4672532 4672738 + 0.340565874754526 NA exon (NM_001081963, exon 3 of 4) exon (NM_001081963, exon 3 of 4) 37706 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-9 chr11 103966016 103966266 + 0.340565874754526 NA promoter-TSS (NM_001304574) promoter-TSS (NM_001304574) -584 NM_001304574 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-28 chr8 54600519 54600770 + 0.340565874754526 NA promoter-TSS (NM_133711) promoter-TSS (NM_133711) -137 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-28 chr7 28159857 28160089 + 0.340565874754526 NA intron (NM_001164655, intron 17 of 19) intron (NM_001164655, intron 17 of 19) -9775 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-10 chr2 160225197 160225479 + 0.340565874754526 NA Intergenic Intergenic 102156 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-6 chr11 115969603 115969855 + 0.340565874754526 NA Intergenic B3|SINE|B2 -4996 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-11 chr12 75543576 75543881 + 0.340565874754526 NA intron (NM_012024, intron 2 of 13) B1_Mus2|SINE|Alu 52472 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526 chr11 117318259 117318539 + 0.340565874754526 NA intron (NM_001113486, intron 3 of 11) intron (NM_001113486, intron 3 of 11) -13316 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-20 chr4 63753378 63753643 + 0.340565874754526 NA Intergenic Intergenic -8397 NM_177371 326623 Mm.208152 NM_177371 ENSMUSG00000050395 Tnfsf15 Tl1|Tl1a|Tnlg1b|Vegi tumor necrosis factor (ligand) superfamily, member 15 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-13 chr14 55603704 55603922 + 0.340565874754526 NA promoter-TSS (NM_001159417) promoter-TSS (NM_001159417) -172 NM_008394 16391 Mm.2032 NM_008394 ENSMUSG00000002325 Irf9 Irf-9|Isgf3g|p48 interferon regulatory factor 9 protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-5 chr11 113731398 113731640 + 0.340565874754526 NA intron (NM_001163346, intron 1 of 1) intron (NM_001163346, intron 1 of 1) 19641 NM_020006 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-17 chr18 77938023 77938215 + 0.340565874754526 NA promoter-TSS (NM_001195633) promoter-TSS (NM_001195633) -348 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-17 chr9 123237639 123237883 + 0.340565874754526 NA Intergenic Intergenic -21723 NM_133974 109332 Mm.27519 NM_133974 ENSMUSG00000035498 Cdcp1 9030022E12Rik|AA409659|E030027H19Rik CUB domain containing protein 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-29 chr7 82465637 82465884 + 0.340565874754526 NA intron (NM_001190374, intron 7 of 29) intron (NM_001190374, intron 7 of 29) 130066 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak1_14_10_0.178155906135076_3.54850957170484_0.340565874754526-25 chr6 127326390 127326669 + 0.340565874754526 NA Intergenic Intergenic -18562 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-16 chr16 34526751 34527119 + 0.340565874754526 NA Intergenic Intergenic -12908 NM_177357 545156 Mm.82274 NM_177357 ENSMUSG00000061751 Kalrn 2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD kalirin, RhoGEF kinase protein-coding common_peak2_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-7 chr14 78849294 78849552 + 0.340565874754526 NA exon (NM_173758, exon 1 of 26) exon (NM_173758, exon 1 of 26) 245 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak2_14_10_0.178155906135076_3.54850957170484_0.340565874754526-12 chr4 155129174 155129427 + 0.340565874754526 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 42696 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding unique_peak1_13_10_0.0793224547278721_3.49909284600123_0.340565874754526-12 chr14 31891419 31891657 + 0.340565874754526 NA Intergenic Intergenic -61123 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding unique_peak2_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-2 chr1 170480842 170481166 + 0.340565874754526 NA intron (NM_001109985, intron 2 of 9) intron (NM_001109985, intron 2 of 9) 76106 NM_027528 70729 Mm.409310 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding unique_peak1_11_12_-0.382509092122597_3.50918517207979_0.340565874754526-4 chr3 27988823 27989087 + 0.340565874754526 NA intron (NM_008875, intron 1 of 25) intron (NM_008875, intron 1 of 25) 4784 NM_008875 18805 Mm.212039 NM_008875 ENSMUSG00000027695 Pld1 AA536939|C85393|Pld1a|Pld1b|mPLD1 phospholipase D1 protein-coding unique_peak1_55_42_0.0983793595165823_5.47545443446039_0.340524918943711 chr2 26408438 26409125 + 0.340524918943711 NA TTS (NM_153125) TTS (NM_153125) 346 NM_001290437 64436 Mm.330070 NM_033134 ENSMUSG00000026925 Inpp5e 1200002L24Rik|72kDa|mKIAA0123 inositol polyphosphate-5-phosphatase E protein-coding common_peak1_55_42_0.0983793595165823_5.47545443446039_0.340524918943711-4 chr5 64877521 64878123 + 0.340524918943711 NA Intergenic Intergenic 54877 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding common_peak1_55_42_0.0983793595165823_5.47545443446039_0.340524918943711-3 chr11 96789091 96789855 + 0.340524918943711 NA intron (NM_007622, intron 1 of 5) CpG 337 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding common_peak2_55_42_0.0983793595165823_5.47545443446039_0.340524918943711-2 chr3 103831570 103832453 + 0.340524918943711 NA promoter-TSS (NM_001142960) promoter-TSS (NM_001142960) -685 NM_001142959 229672 Mm.297245 NM_001142959 ENSMUSG00000044165 Bcl2l15 Bfk|Gm566 BCLl2-like 15 protein-coding common_peak2_55_42_0.0983793595165823_5.47545443446039_0.340524918943711 chr1 160906511 160907131 + 0.340524918943711 NA intron (NM_001024952, intron 1 of 19) CpG 410 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak1_55_42_0.0983793595165823_5.47545443446039_0.340524918943711-2 chr11 76478954 76479725 + 0.340524918943711 NA intron (NM_001346670, intron 2 of 21) intron (NM_001346670, intron 2 of 21) -10874 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_55_42_0.0983793595165823_5.47545443446039_0.340524918943711 chr1 43236763 43237373 + 0.340524918943711 NA Intergenic RSINE1|SINE|B4 -40307 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_55_42_0.0983793595165823_5.47545443446039_0.340524918943711-4 chr7 67741067 67741592 + 0.340524918943711 NA intron (NM_207663, intron 2 of 4) intron (NM_207663, intron 2 of 4) 18413 NM_183312 233335 Mm.60526 NM_183312 ENSMUSG00000030554 Synm 4930412K21Rik|AI852401|Dmn|E130104F11|Syn|Synemin synemin, intermediate filament protein protein-coding common_peak1_50_46_-0.163922392113731_5.47262765562077_0.340524918943711-2 chrX 68678737 68679570 + 0.340524918943711 NA promoter-TSS (NR_033481) promoter-TSS (NR_033481) 612 NM_001290424 14265 Mm.3451 NM_008031 ENSMUSG00000000838 Fmr1 FMRP|Fmr-1 fragile X mental retardation syndrome 1 protein-coding common_peak2_50_46_-0.163922392113731_5.47262765562077_0.340524918943711-2 chr7 101246162 101246830 + 0.340524918943711 NA intron (NM_199012, intron 11 of 20) intron (NM_199012, intron 11 of 20) 55592 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak2_50_46_-0.163922392113731_5.47262765562077_0.340524918943711 chr1 9637243 9638349 + 0.340524918943711 NA Intergenic Intergenic -6704 NR_015470 72481 Mm.279818 NR_015470 ENSMUSG00000079671 2610203C22Rik 2310007M24Rik RIKEN cDNA 2610203C22 gene ncRNA common_peak2_55_42_0.0983793595165823_5.47545443446039_0.340524918943711-3 chr3 121702112 121702937 + 0.340524918943711 NA Intergenic Intergenic -21013 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_50_46_-0.163922392113731_5.47262765562077_0.340524918943711 chr8 64614973 64615565 + 0.340524918943711 NA intron (NM_013494, intron 3 of 8) intron (NM_013494, intron 3 of 8) 77840 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_161_139_-0.0829555433905966_7.08780524524967_0.340297148130333 chr7 127344673 127346550 + 0.340297148130333 NA promoter-TSS (NM_146202) promoter-TSS (NM_146202) -297 NM_146202 233890 Mm.23031 NM_146202 ENSMUSG00000047371 Zfp768 BC026432|Znf768 zinc finger protein 768 protein-coding common_peak1_170_132_0.0684972439256235_7.089531057464_0.340297148130333 chr11 70027077 70028885 + 0.340297148130333 NA intron (NM_007864, intron 2 of 19) intron (NM_007864, intron 2 of 19) 9376 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding common_peak1_221_173_0.0547428882896801_7.47031493999357_0.340291596188486-2 chr8 33928392 33929819 + 0.340291596188486 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 758 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_221_173_0.0547428882896801_7.47031493999357_0.340291596188486 chr17 87849806 87851544 + 0.340291596188486 NA Intergenic Intergenic -52681 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak1_118_103_-0.0960047908037538_6.65243732273921_0.340122364122499 chr2 32686141 32687441 + 0.340122364122499 NA TTS (NR_106168) TTS (NR_106168) 975 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak1_125_97_0.0716054745583827_6.6505125813944_0.340122364122499 chr2 30657188 30658399 + 0.340122364122499 NA TTS (NR_136917) TTS (NR_136917) 20218 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA common_peak1_87_67_0.0846575817734765_6.12979163213708_0.340093681644832 chr7 99321836 99322724 + 0.340093681644832 NA intron (NM_010837, intron 3 of 3) intron (NM_010837, intron 3 of 3) 30959 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_81_72_-0.11886499127958_6.13039206324023_0.340093681644832 chr13 65112237 65113427 + 0.340093681644832 NA 5' UTR (NM_133680, exon 1 of 12) 5' UTR (NM_133680, exon 1 of 12) 150 NM_001083901 66631 Mm.239196 NM_133680 ENSMUSG00000038212 Mfsd14b 5730414C17Rik|AU045608|AW539692|Hiatl1 major facilitator superfamily domain containing 14B protein-coding common_peak1_223_174_0.0593230432398633_7.48087263345226_0.340070988153723 chr3 96218964 96220846 + 0.340070988153723 NA promoter-TSS (NM_178213) promoter-TSS (NM_178213) -11 NM_178213 621893 NM_178213 ENSMUSG00000063689 Hist2h2ab EG621893|H2a-613a histone cluster 2, H2ab protein-coding common_peak2_171_133_0.0660433806051719_7.09911088076036_0.340009413380132 chr16 33380251 33381912 + 0.340009413380132 NA promoter-TSS (NM_001358570) promoter-TSS (NM_001358570) -221 NM_001358570 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak2_119_104_-0.0978229316134813_6.66533405185938_0.339735196507764 chr12 104751134 104752584 + 0.339735196507764 NA promoter-TSS (NM_148948) promoter-TSS (NM_148948) 93 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding unique_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784 chr19 53007519 53008270 + 0.339646668784 NA exon (NM_133216, exon 9 of 21) exon (NM_133216, exon 9 of 21) 2862 NR_105834 102465220 NR_105834 ENSMUSG00000098730 Mir6407 Gm27832|mmu-mir-6407 microRNA 6407 ncRNA common_peak2_56_43_0.0905674381353041_5.50471533770495_0.339646668784 chr4 147906547 147906975 + 0.339646668784 NA Intergenic Intergenic -1852 NM_001285921 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak1_51_47_-0.166479305839287_5.50172284780151_0.339646668784-3 chr6 13069898 13070468 + 0.339646668784 NA intron (NM_027992, intron 1 of 8) intron (NM_027992, intron 1 of 8) 424 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding common_peak2_51_47_-0.166479305839287_5.50172284780151_0.339646668784-3 chr2 180257480 180258219 + 0.339646668784 NA TTS (NR_037274) TTS (NR_037274) 313 NR_037274 100526556 NR_037274 ENSMUSG00000092827 Mir3091 mir-3091|mmu-mir-3091 microRNA 3091 ncRNA common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-7 chr6 34722274 34723064 + 0.339646668784 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 13225 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_51_47_-0.166479305839287_5.50172284780151_0.339646668784-2 chr11 120571845 120572776 + 0.339646668784 NA intron (NM_011032, intron 1 of 10) intron (NM_011032, intron 1 of 10) 943 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak2_56_43_0.0905674381353041_5.50471533770495_0.339646668784-2 chr5 64876389 64876880 + 0.339646668784 NA Intergenic Intergenic 56065 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-4 chr2 25271636 25272222 + 0.339646668784 NA promoter-TSS (NM_175300) promoter-TSS (NM_175300) 489 NM_023464 68475 Mm.21444 NM_023464 ENSMUSG00000026966 Ssna1 1110003H09Rik|1190004J23Rik|AA934184|N14|NA14 SS nuclear autoantigen 1 protein-coding common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784 chr10 85871883 85872492 + 0.339646668784 NA intron (NM_133993, intron 1 of 14) CpG 356 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak2_51_47_-0.166479305839287_5.50172284780151_0.339646668784 chr10 122047354 122047782 + 0.339646668784 NA promoter-TSS (NM_001242411) promoter-TSS (NM_001242411) -253 NM_001081037 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-8 chrX 36795664 36796324 + 0.339646668784 NA intron (NM_007451, intron 1 of 3) CpG 397 NM_007451 11740 Mm.371544 NM_007451 ENSMUSG00000016319 Slc25a5 Ant2 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 protein-coding common_peak2_51_47_-0.166479305839287_5.50172284780151_0.339646668784-2 chr11 58329907 58330462 + 0.339646668784 NA promoter-TSS (NM_001161338) promoter-TSS (NM_001161338) 155 NM_001256520 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-3 chr15 8169116 8169429 + 0.339646668784 NA 5' UTR (NM_001162906, exon 1 of 53) 5' UTR (NM_001162906, exon 1 of 53) 166 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-6 chr3 121720714 121721584 + 0.339646668784 NA Intergenic Intergenic -2388 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_51_47_-0.166479305839287_5.50172284780151_0.339646668784 chr10 81704778 81705109 + 0.339646668784 NA intron (NM_001243067, intron 1 of 3) CpG 118 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-5 chr2 156392313 156393025 + 0.339646668784 NA non-coding (NR_024329, exon 1 of 1) non-coding (NR_024329, exon 1 of 1) 310 NR_024329 347740 Mm.324242 NR_024329 ENSMUSG00000102869 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA common_peak1_56_43_0.0905674381353041_5.50471533770495_0.339646668784-2 chr11 61929737 61930261 + 0.339646668784 NA exon (NM_019921, exon 1 of 15) exon (NM_019921, exon 1 of 15) 258 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding common_peak1_88_68_0.0797827696217581_6.14841584158905_0.339539352694109 chr10 84576624 84577429 + 0.339539352694109 NA promoter-TSS (NM_146008) promoter-TSS (NM_146008) 79 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding common_peak1_88_68_0.0797827696217581_6.14841584158905_0.339539352694109-2 chr17 25239825 25240910 + 0.339539352694109 NA promoter-TSS (NM_001346737) promoter-TSS (NM_001346737) 197 NM_026676 68327 Mm.180687 NM_026676 ENSMUSG00000015126 Tsr3 0610007P22Rik|1110014B11Rik|AL022759 TSR3 20S rRNA accumulation protein-coding common_peak2_82_73_-0.121129744738032_6.14888849325993_0.339539352694109 chr7 116443636 116444401 + 0.339539352694109 NA promoter-TSS (NM_011083) promoter-TSS (NM_011083) -560 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak1_82_73_-0.121129744738032_6.14888849325993_0.339539352694109 chr3 138488607 138489348 + 0.339539352694109 NA intron (NM_175224, intron 1 of 10) CpG 405 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding common_peak1_165_142_-0.0786026954607149_7.12056998904803_0.339446412954381 chr15 79686670 79688148 + 0.339446412954381 NA 5' UTR (NM_028792, exon 1 of 4) 5' UTR (NM_028792, exon 1 of 4) 463 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding common_peak1_173_135_0.0612308027811386_7.11807824264091_0.339446412954381 chr4 40721468 40723372 + 0.339446412954381 NA promoter-TSS (NR_029594) promoter-TSS (NR_029594) -48 NM_008298 15502 Mm.27897 NM_008298 ENSMUSG00000028410 Dnaja1 HSJ-2|Hsj2|Nedd7 DnaJ heat shock protein family (Hsp40) member A1 protein-coding common_peak1_164_142_-0.087258412773239_7.11624213039177_0.339446412954381 chr15 76904081 76905214 + 0.339446412954381 NA exon (NM_012053, exon 3 of 6) exon (NM_012053, exon 3 of 6) 576 NM_012053 26961 Mm.30066 NM_012053 ENSMUSG00000003970 Rpl8 - ribosomal protein L8 protein-coding common_peak1_216_185_-0.0741052015543628_7.50210621033085_0.33942379361645 chr18 60774323 60776075 + 0.33942379361645 NA intron (NM_020600, intron 1 of 4) intron (NM_020600, intron 1 of 4) 603 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-7 chr3 52343636 52344108 + 0.339372226903478 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 75535 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-9 chr19 17010438 17010856 + 0.339372226903478 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 54529 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478-2 chr13 51333855 51334195 + 0.339372226903478 NA Intergenic Intergenic -74593 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding common_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478 chr1 40530013 40530484 + 0.339372226903478 NA intron (NM_010553, intron 6 of 12) intron (NM_010553, intron 6 of 12) 14886 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding unique_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-4 chr5 114925940 114926557 + 0.339372226903478 NA intron (NM_001359946, intron 1 of 4) intron (NM_001359946, intron 1 of 4) 3008 NM_001359945 231655 Mm.95479 NM_145209 ENSMUSG00000041827 Oasl1 7530414C13Rik|oasl9 2'-5' oligoadenylate synthetase-like 1 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-5 chr11 48820139 48820413 + 0.339372226903478 NA Intergenic Intergenic -2885 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-7 chrX 94177548 94178081 + 0.339372226903478 NA Intergenic CpG 34837 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-13 chr7 28597457 28598030 + 0.339372226903478 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 441 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-2 chr12 52006117 52006670 + 0.339372226903478 NA exon (NM_029545, exon 1 of 3) exon (NM_029545, exon 1 of 3) 114 NM_029545 328092 Mm.2821 NM_029545 ENSMUSG00000020956 Dtd2 4930578F06Rik|6530401N04Rik|B830049N13Rik D-tyrosyl-tRNA deacylase 2 protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-4 chr13 51761899 51762339 + 0.339372226903478 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 31628 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478 chr15 76327638 76327934 + 0.339372226903478 NA intron (NM_175399, intron 1 of 2) MER68|LTR|ERVL 389 NM_175399 109075 Mm.322752 NM_175399 ENSMUSG00000034259 Exosc4 1110039I09Rik|1500001N04Rik|Rrp41 exosome component 4 protein-coding unique_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478-2 chr8 35597999 35598593 + 0.339372226903478 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -9276 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-10 chr7 89404501 89405050 + 0.339372226903478 NA promoter-TSS (NM_001360746) promoter-TSS (NM_001360746) 409 NM_008055 14366 Mm.86755 NM_008055 ENSMUSG00000049791 Fzd4 Fz4 frizzled class receptor 4 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-8 chr15 83594219 83594437 + 0.339372226903478 NA intron (NM_183017, intron 1 of 13) intron (NM_183017, intron 1 of 13) 829 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding unique_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478 chr13 28719239 28719632 + 0.339372226903478 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -8562 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-5 chr3 97609698 97610159 + 0.339372226903478 NA intron (NM_026539, intron 1 of 22) CpG 262 NM_026539 68058 Mm.31761 NM_026539 ENSMUSG00000028089 Chd1l 4432404A22Rik|Alc1|Snf2p chromodomain helicase DNA binding protein 1-like protein-coding common_peak1_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-3 chr7 25267607 25267873 + 0.339372226903478 NA promoter-TSS (NM_001302811) promoter-TSS (NM_001302811) 41 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-9 chr5 31583933 31584259 + 0.339372226903478 NA Intergenic Intergenic -12699 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-2 chr6 13052966 13053460 + 0.339372226903478 NA Intergenic Intergenic -16546 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding unique_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-6 chr8 121648126 121648526 + 0.339372226903478 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 3607 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-7 chr14 20809235 20809850 + 0.339372226903478 NA Intergenic Intergenic 15303 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA common_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478-5 chr6 108828724 108829145 + 0.339372226903478 NA exon (NM_138677, exon 1 of 12) exon (NM_138677, exon 1 of 12) 293 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-6 chr5 23850616 23851154 + 0.339372226903478 NA intron (NR_045042, intron 1 of 3) CpG 288 NR_045040 67194 Mm.423733 NR_045040 ENSMUSG00000097180 2700038G22Rik - RIKEN cDNA 2700038G22 gene ncRNA unique_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-3 chr15 63726527 63727440 + 0.339372226903478 NA Intergenic Intergenic 81756 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-5 chr13 110928489 110928733 + 0.339372226903478 NA Intergenic Intergenic -24765 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478-6 chr8 113958554 113958958 + 0.339372226903478 NA Intergenic Intergenic -109917 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-3 chr15 10686717 10687452 + 0.339372226903478 NA intron (NM_001356534, intron 2 of 16) B1F1|SINE|Alu 26456 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478 chr1 106629708 106630161 + 0.339372226903478 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -83303 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-2 chr10 77206959 77207376 + 0.339372226903478 NA Intergenic Intergenic -40637 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak1_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-2 chr7 142387612 142387908 + 0.339372226903478 NA exon (NM_009983, exon 1 of 9) exon (NM_009983, exon 1 of 9) 110 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-2 chr13 56443715 56444003 + 0.339372226903478 NA intron (NM_177809, intron 2 of 7) intron (NM_177809, intron 2 of 7) 5504 NM_177809 328258 Mm.482177 NM_177809 ENSMUSG00000021509 Slc25a48 AU042651|E230025K15 solute carrier family 25, member 48 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-4 chr10 71146188 71146754 + 0.339372226903478 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 13219 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-14 chr9 106202905 106203465 + 0.339372226903478 NA promoter-TSS (NM_011876) promoter-TSS (NM_011876) 77 NM_011876 23999 Mm.274346 NM_011876 ENSMUSG00000023277 Twf2 A6-related|AU014993|Ptk9l|Ptk9r twinfilin actin binding protein 2 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478 chr1 161036355 161036829 + 0.339372226903478 NA intron (NR_153815, intron 5 of 8) intron (NR_153815, intron 5 of 8) -1500 NR_028543 100217446 NR_028543 ENSMUSG00000064968 Snord47 MBII-96 small nucleolar RNA, C/D box 47 snoRNA unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-4 chr17 33939858 33940231 + 0.339372226903478 NA promoter-TSS (NM_020603) promoter-TSS (NM_020603) 286 NM_001185182 14976 Mm.2948 NM_010385 ENSMUSG00000024309 Pfdn6 H-2Ke2|H2-Ke2|Ke-2 prefoldin subunit 6 protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-10 chr2 137662855 137663224 + 0.339372226903478 NA Intergenic Intergenic -546519 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478 chr11 101060283 101060844 + 0.339372226903478 NA intron (NM_001243049, intron 20 of 20) intron (NM_001243049, intron 20 of 20) -9531 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-3 chr10 67607191 67607636 + 0.339372226903478 NA Intergenic Intergenic -35454 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-3 chr11 107131265 107131801 + 0.339372226903478 NA exon (NM_176850, exon 1 of 28) exon (NM_176850, exon 1 of 28) 389 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-11 chr8 69974581 69975047 + 0.339372226903478 NA promoter-TSS (NM_001113346) promoter-TSS (NM_001113346) -431 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-4 chr7 135210829 135211331 + 0.339372226903478 NA Intergenic Intergenic -15078 NR_046050 74314 Mm.415339 NR_046050 ENSMUSG00000100717 1700120G07Rik - RIKEN cDNA 1700120G07 gene ncRNA common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-8 chr3 98356586 98357080 + 0.339372226903478 NA Intergenic Intergenic -16864 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478-3 chr5 115560370 115560824 + 0.339372226903478 NA intron (NM_007475, intron 2 of 6) intron (NM_007475, intron 2 of 6) 1130 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_28_27_-0.225386921107093_4.69466146150406_0.339372226903478 chr13 5347573 5347990 + 0.339372226903478 NA Intergenic Intergenic 510311 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_32_24_0.123209794623034_4.70546108708624_0.339372226903478-4 chr5 130002489 130002957 + 0.339372226903478 NA exon (NM_010368, exon 1 of 12) exon (NM_010368, exon 1 of 12) 326 NM_010368 110006 Mm.3317 NM_010368 ENSMUSG00000025534 Gusb AI747421|Gur|Gus|Gus-r|Gus-s|Gus-t|Gus-u|Gut|asd|g glucuronidase, beta protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-2 chr10 17015172 17015727 + 0.339372226903478 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 80333 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-12 chr5 113901246 113901671 + 0.339372226903478 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 7248 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_28_27_-0.225386921107093_4.69466146150406_0.339372226903478-6 chr3 38144972 38145590 + 0.339372226903478 NA Intergenic Intergenic 62838 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-11 chr3 90265276 90265558 + 0.339372226903478 NA 5' UTR (NM_001356483, exon 1 of 28) 5' UTR (NM_001356483, exon 1 of 28) 182 NM_001356483 229541 Mm.30571 NM_201407 ENSMUSG00000042404 Dennd4b - DENN/MADD domain containing 4B protein-coding unique_peak1_28_27_-0.225386921107093_4.69466146150406_0.339372226903478 chr2 27097007 27097364 + 0.339372226903478 NA intron (NM_029981, intron 11 of 18) intron (NM_029981, intron 11 of 18) 17804 NM_029981 77794 Mm.330088 NM_029981 ENSMUSG00000036040 Adamtsl2 A930008K15Rik|tcp-1 ADAMTS-like 2 protein-coding unique_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-5 chr8 120575261 120575858 + 0.339372226903478 NA intron (NM_001145896, intron 13 of 15) intron (NM_001145896, intron 13 of 15) 13516 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak1_32_24_0.123209794623034_4.70546108708624_0.339372226903478-6 chr13 54789456 54789993 + 0.339372226903478 NA intron (NM_028841, intron 1 of 7) CpG 319 NM_028841 74257 Mm.32883 NM_028841 ENSMUSG00000025875 Tspan17 2210021G21Rik|AI047581|Fbxo23|Tm4sf17 tetraspanin 17 protein-coding common_peak2_127_99_0.0650189157233392_6.67636564763639_0.339355623733785 chr8 83715268 83716236 + 0.339355623733785 NA intron (NM_197982, intron 1 of 10) CpG 575 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak1_128_99_0.0761669630889186_6.68193967131918_0.339355623733785 chr8 39005598 39006660 + 0.339355623733785 NA exon (NM_030254, exon 1 of 10) exon (NM_030254, exon 1 of 10) 284 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak2_174_136_0.0588708491926679_7.12746750755686_0.33917096843448 chr11 3912174 3913844 + 0.33917096843448 NA exon (NM_153142, exon 1 of 2) exon (NM_153142, exon 1 of 2) 1655 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak1_166_143_-0.0800526294157677_7.12989868673443_0.33917096843448 chr6 71543514 71544724 + 0.33917096843448 NA promoter-TSS (NM_001355675) promoter-TSS (NM_001355675) -234 NM_001355675 66700 Mm.181278 NM_025783 ENSMUSG00000053119 Chmp3 25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24 charged multivesicular body protein 3 protein-coding common_peak2_229_179_0.056547145073969_7.52012666886666_0.339004122053175 chr3 103019869 103021864 + 0.339004122053175 NA intron (NM_001310693, intron 1 of 17) CpG 320 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak2_83_74_-0.123338974049744_6.16714920347101_0.339000539072378 chr13 74807470 74808711 + 0.339000539072378 NA promoter-TSS (NM_009817) promoter-TSS (NM_009817) -130 NM_009817 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak2_89_69_0.0750301509083728_6.16679809239915_0.339000539072378 chr14 54685853 54686674 + 0.339000539072378 NA promoter-TSS (NM_021437) promoter-TSS (NM_021437) 92 NM_021437 58248 Mm.197509 NM_021437 ENSMUSG00000040822 1700123O20Rik MNCb-2990 RIKEN cDNA 1700123O20 gene protein-coding common_peak1_83_74_-0.123338974049744_6.16714920347101_0.339000539072378 chr15 56843787 56844529 + 0.339000539072378 NA Intergenic Intergenic -149612 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak1_129_100_0.072873631310709_6.69464829840715_0.338983424464124-2 chr8 70631809 70632966 + 0.338983424464124 NA promoter-TSS (NM_001330687) promoter-TSS (NM_001330687) 69 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_129_100_0.072873631310709_6.69464829840715_0.338983424464124 chr17 35163704 35164834 + 0.338983424464124 NA intron (NM_001199044, intron 1 of 30) intron (NM_001199044, intron 1 of 30) 608 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_121_106_-0.101365896671514_6.69078403806539_0.338983424464099 chr11 20112001 20113634 + 0.338983424464099 NA exon (NM_146243, exon 1 of 9) exon (NM_146243, exon 1 of 9) 134 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak2_175_137_0.0565409866724034_7.13679495011437_0.338899446058961 chr3 121635393 121636836 + 0.338899446058961 NA non-coding (NR_036456, exon 4 of 4) non-coding (NR_036456, exon 4 of 4) 7371 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_359_282_0.0455449658749671_8.16743072576937_0.338862439350353 chr17 35915801 35919062 + 0.338862439350353 NA promoter-TSS (NR_035445) promoter-TSS (NR_035445) 235 NM_001163818 52040 Mm.29385 NM_175934 ENSMUSG00000039220 Ppp1r10 2610025H06Rik|Cat53|D17Ertd808e|Fb19|Pnuts protein phosphatase 1, regulatory subunit 10 protein-coding common_peak1_53_48_-0.142162993215049_5.54362834750768_0.338806640379593 chr12 30584592 30585091 + 0.338806640379593 NA intron (NM_172049, intron 1 of 4) intron (NM_172049, intron 1 of 4) 398 NM_172049 211986 Mm.34035 NM_172049 ENSMUSG00000043061 Tmem18 BC024093 transmembrane protein 18 protein-coding common_peak1_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-2 chr17 47266255 47267042 + 0.338806640379593 NA intron (NM_001097623, intron 4 of 19) PB1D10|SINE|Alu 36418 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-4 chr19 61226806 61227452 + 0.338806640379593 NA exon (NM_009970, exon 3 of 12) exon (NM_009970, exon 3 of 12) 1289 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak1_57_44_0.0830599250475919_5.53338305885347_0.338806640379593-3 chr3 98042529 98043083 + 0.338806640379593 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 29268 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-3 chr7 80186723 80187453 + 0.338806640379593 NA intron (NM_013659, intron 1 of 14) intron (NM_013659, intron 1 of 14) 247 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-4 chr19 44914365 44915148 + 0.338806640379593 NA Intergenic Intergenic -16363 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-4 chr7 112304566 112305518 + 0.338806640379593 NA intron (NM_001193305, intron 4 of 25) MIRb|SINE|MIR -63266 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_58_44_0.107547988993005_5.54562709082618_0.338806640379593-5 chr8 106893668 106894086 + 0.338806640379593 NA promoter-TSS (NM_145412) promoter-TSS (NM_145412) 237 NM_001358982 21771 Mm.10665 NM_011574 ENSMUSG00000041438 Utp4 Cirh1a|Cirhin|Naic|Teg-292|Tex292 UTP4 small subunit processome component protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-3 chr13 66904825 66905295 + 0.338806640379593 NA promoter-TSS (NM_001177750) promoter-TSS (NM_001177750) 290 NM_026219 67530 Mm.379136 NM_026219 ENSMUSG00000021520 Uqcrb 2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593 chr1 132264940 132265505 + 0.338806640379593 NA Intergenic Intergenic -33404 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-4 chr4 134703379 134704171 + 0.338806640379593 NA 5' UTR (NM_207237, exon 1 of 12) 5' UTR (NM_207237, exon 1 of 12) 515 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-2 chr7 3290720 3291209 + 0.338806640379593 NA intron (NM_001093765, intron 1 of 2) intron (NM_001093765, intron 1 of 2) 408 NM_001093765 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak2_53_48_-0.142162993215049_5.54362834750768_0.338806640379593 chr15 102470823 102471280 + 0.338806640379593 NA intron (NM_001174073, intron 1 of 12) CpG 419 NM_001174073 18521 Mm.236513 NM_011042 ENSMUSG00000056851 Pcbp2 AW412548|Hnrpx|alphaCP-2 poly(rC) binding protein 2 protein-coding common_peak1_57_44_0.0830599250475919_5.53338305885347_0.338806640379593-5 chr6 83830837 83831645 + 0.338806640379593 NA intron (NM_146169, intron 2 of 4) intron (NM_146169, intron 2 of 4) 500 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak1_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-2 chr16 64851104 64851660 + 0.338806640379593 NA promoter-TSS (NM_001357416) promoter-TSS (NM_001357416) 341 NM_001347245 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak2_57_44_0.0830599250475919_5.53338305885347_0.338806640379593-3 chr2 173665156 173665825 + 0.338806640379593 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 5645 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-7 chr3 98042377 98043012 + 0.338806640379593 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 29156 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_57_44_0.0830599250475919_5.53338305885347_0.338806640379593 chr11 76911764 76912436 + 0.338806640379593 NA intron (NM_025655, intron 3 of 5) intron (NM_025655, intron 3 of 5) 7555 NM_025655 66601 Mm.25138 NM_025655 ENSMUSG00000020839 Tmigd1 2010002A20Rik|Tmigd transmembrane and immunoglobulin domain containing 1 protein-coding common_peak2_58_44_0.107547988993005_5.54562709082618_0.338806640379593-2 chr14 20154013 20154840 + 0.338806640379593 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 27356 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_57_44_0.0830599250475919_5.53338305885347_0.338806640379593-2 chr11 113750245 113751046 + 0.338806640379593 NA intron (NM_001163346, intron 1 of 1) intron (NM_001163346, intron 1 of 1) 515 NM_020006 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding common_peak2_58_44_0.107547988993005_5.54562709082618_0.338806640379593 chr1 177258645 177259164 + 0.338806640379593 NA Intergenic CpG -10137 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak1_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-3 chr18 35831204 35831638 + 0.338806640379593 NA intron (NM_001357458, intron 1 of 2) CpG 1107 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-5 chr5 139344587 139345152 + 0.338806640379593 NA intron (NM_197980, intron 1 of 2) intron (NM_197980, intron 1 of 2) 297 NM_197980 68033 Mm.261064 NM_197980 ENSMUSG00000045438 Cox19 1810074D02Rik|2810437L13Rik cytochrome c oxidase assembly protein 19 protein-coding common_peak1_57_44_0.0830599250475919_5.53338305885347_0.338806640379593-4 chr3 135437577 135438012 + 0.338806640379593 NA promoter-TSS (NM_025356) promoter-TSS (NM_025356) -438 NM_001356594 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak1_57_44_0.0830599250475919_5.53338305885347_0.338806640379593 chr1 43933096 43933622 + 0.338806640379593 NA promoter-TSS (NM_001310540) promoter-TSS (NM_001310540) -635 NM_001310540 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-5 chr2 21205851 21206410 + 0.338806640379593 NA promoter-TSS (NM_027728) promoter-TSS (NM_027728) 406 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak1_52_48_-0.168939788845348_5.53023994969253_0.338806640379593 chr1 71650400 71651135 + 0.338806640379593 NA intron (NM_001276412, intron 2 of 44) intron (NM_001276412, intron 2 of 44) 2467 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-8 chr4 59783248 59783835 + 0.338806640379593 NA intron (NM_001013577, intron 1 of 4) CpG 314 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding common_peak2_58_44_0.107547988993005_5.54562709082618_0.338806640379593-4 chr2 84827045 84827680 + 0.338806640379593 NA intron (NM_013899, intron 1 of 2) MIR3|SINE|MIR 341 NM_013899 30059 Mm.21826 NM_013899 ENSMUSG00000027076 Timm10 Tim13|Timm13a translocase of inner mitochondrial membrane 10 protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-6 chr3 37728474 37729272 + 0.338806640379593 NA Intergenic Intergenic -4513 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak2_52_48_-0.168939788845348_5.53023994969253_0.338806640379593-2 chr11 60417649 60418398 + 0.338806640379593 NA promoter-TSS (NM_145427) promoter-TSS (NM_145427) 878 NM_025757 66771 Mm.29950 NM_025757 ENSMUSG00000018415 Gid4 4933439F18Rik GID complex subunit 4, VID24 homolog protein-coding common_peak1_57_44_0.0830599250475919_5.53338305885347_0.338806640379593-2 chr13 32338147 32339094 + 0.338806640379593 NA promoter-TSS (NM_146041) promoter-TSS (NM_146041) -76 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_58_44_0.107547988993005_5.54562709082618_0.338806640379593-3 chr14 121797634 121798457 + 0.338806640379593 NA promoter-TSS (NM_134074) promoter-TSS (NM_134074) -311 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_53_48_-0.142162993215049_5.54362834750768_0.338806640379593-3 chr19 56602138 56602959 + 0.338806640379593 NA Intergenic Intergenic 54287 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak2_292_229_0.0497129237729945_7.87034651283087_0.338695981652908 chr16 45069313 45071558 + 0.338695981652908 NA Intergenic Intergenic -23576 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_130_101_0.0696369664708953_6.70724382520694_0.338618385881984 chr2 120127192 120128523 + 0.338618385881984 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 26718 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_123_107_-0.0914929421839306_6.7091410310715_0.338618385881959 chr16 48992857 48994127 + 0.338618385881959 NA promoter-TSS (NM_172616) promoter-TSS (NM_172616) 620 NM_027341 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak2_122_107_-0.103092332335575_6.70334133599568_0.338618385881959-2 chr8 110814406 110815282 + 0.338618385881959 NA intron (NM_133953, intron 20 of 25) intron (NM_133953, intron 20 of 25) -8920 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_123_107_-0.0914929421839306_6.7091410310715_0.338618385881959 chr9 79216318 79217480 + 0.338618385881959 NA Intergenic Intergenic 302403 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA common_peak2_122_107_-0.103092332335575_6.70334133599568_0.338618385881959 chr7 45525577 45526686 + 0.338618385881959 NA promoter-TSS (NM_148927) promoter-TSS (NM_148927) 137 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak2_84_75_-0.125494736926499_6.18518014498034_0.338476598245404-3 chr2 35256032 35256913 + 0.338476598245404 NA 5' UTR (NM_001206367, exon 1 of 18) 5' UTR (NM_001206367, exon 1 of 18) 113 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_85_75_-0.108739962807396_6.19355753203989_0.338476598245404-2 chr4 136140492 136141332 + 0.338476598245404 NA Intergenic Intergenic -2910 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_84_75_-0.125494736926499_6.18518014498034_0.338476598245404 chr10 86172491 86173320 + 0.338476598245404 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 77051 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_90_70_0.0703951249513164_6.18494468198034_0.338476598245404-4 chr8 72571270 72572045 + 0.338476598245404 NA promoter-TSS (NM_172396) promoter-TSS (NM_172396) -166 NR_151663 74166 Mm.212927 NM_144534 ENSMUSG00000031791 Tmem38a 1110001E17Rik|AI413399|SPR-27|TRIC-A|mg33a transmembrane protein 38A protein-coding common_peak2_84_75_-0.125494736926499_6.18518014498034_0.338476598245404-2 chr19 34192946 34194461 + 0.338476598245404 NA intron (NM_001360718, intron 1 of 10) URR1B|DNA|hAT-Charlie 769 NM_001360718 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak2_90_70_0.0703951249513164_6.18494468198034_0.338476598245404 chr3 41289254 41290548 + 0.338476598245404 NA Intergenic B2_Mm2|SINE|B2 203298 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak1_90_70_0.0703951249513164_6.18494468198034_0.338476598245404-3 chr7 65370863 65371748 + 0.338476598245404 NA promoter-TSS (NM_001163574) promoter-TSS (NM_001163574) -61 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak2_91_70_0.0860512027183287_6.19277272086385_0.338476598245404 chr4 120405217 120406100 + 0.338476598245404 NA intron (NM_013883, intron 1 of 16) CpG 377 NM_013883 29871 Mm.427014 NM_013883 ENSMUSG00000000085 Scmh1 AI315320|AI851618|Scml1|Scml3 sex comb on midleg homolog 1 protein-coding common_peak1_85_75_-0.108739962807396_6.19355753203989_0.338476598245404 chr1 66816367 66816869 + 0.338476598245404 NA intron (NM_001357156, intron 1 of 14) CpG 977 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak2_85_75_-0.108739962807396_6.19355753203989_0.338476598245404 chr1 39535755 39536734 + 0.338476598245404 NA exon (NM_028043, exon 1 of 7) exon (NM_028043, exon 1 of 7) 543 NM_028043 52846 Mm.259421 NM_028043 ENSMUSG00000003135 Cnot11 2410015L18Rik|C40|D1Bwg0212e CCR4-NOT transcription complex, subunit 11 protein-coding common_peak1_90_70_0.0703951249513164_6.18494468198034_0.338476598245404 chr19 34253410 34254257 + 0.338476598245404 NA intron (NM_007392, intron 1 of 8) intron (NM_007392, intron 1 of 8) 1540 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding common_peak1_84_75_-0.125494736926499_6.18518014498034_0.338476598245404 chr12 35534121 35535155 + 0.338476598245404 NA 5' UTR (NM_013464, exon 1 of 11) 5' UTR (NM_013464, exon 1 of 11) 351 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding common_peak2_84_75_-0.125494736926499_6.18518014498034_0.338476598245404-5 chr9 99130827 99131970 + 0.338476598245404 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 8813 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak2_85_75_-0.108739962807396_6.19355753203989_0.338476598245404-2 chr19 53407369 53408280 + 0.338476598245404 NA Intergenic B3|SINE|B2 -17190 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_90_70_0.0703951249513164_6.18494468198034_0.338476598245404-2 chr5 124116074 124116854 + 0.338476598245404 NA TTS (NM_025671) TTS (NM_025671) 356 NM_144509 65105 Mm.29430 NM_144509 ENSMUSG00000029404 Arl6ip4 AA408210|AA408365|Aip-4|Srp25 ADP-ribosylation factor-like 6 interacting protein 4 protein-coding common_peak2_90_70_0.0703951249513164_6.18494468198034_0.338476598245404-2 chr7 127232557 127233795 + 0.338476598245404 NA promoter-TSS (NR_030674) promoter-TSS (NR_030674) -46 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA common_peak2_84_75_-0.125494736926499_6.18518014498034_0.338476598245404-4 chr8 126919078 126920148 + 0.338476598245404 NA Intergenic Intergenic 26308 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak2_131_102_0.0664554980680512_6.71972827621724_0.338260303283201 chr3 131489690 131491089 + 0.338260303283201 NA Intergenic CpG -74379 NM_001289479 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding common_peak1_131_102_0.0664554980680512_6.71972827621724_0.338260303283201 chr12 83632247 83633410 + 0.338260303283201 NA intron (NM_027349, intron 1 of 18) CpG 594 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak1_224_191_-0.0680474136871823_7.55093879387756_0.33819171599779 chr6 47453720 47455426 + 0.33819171599779 NA promoter-TSS (NM_001355550) promoter-TSS (NM_001355550) -184 NM_001355550 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 Cul-1 cullin 1 protein-coding common_peak1_179_140_0.0577068358813015_7.16840477033944_0.338107591505897 chr16 30387385 30389338 + 0.338107591505897 NA 5' UTR (NM_001128094, exon 1 of 33) 5' UTR (NM_001128094, exon 1 of 33) 169 NM_001128094 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding common_peak1_171_147_-0.0773207945660062_7.17079296834595_0.338107591505897 chr6 115807237 115808978 + 0.338107591505897 NA promoter-TSS (NR_028546) promoter-TSS (NR_028546) -4 NR_028546 100217451 Mm.484708 NR_028546 ENSMUSG00000064563 Snora7a MBI-141 small nucleolar RNA, H/ACA box 7A snoRNA common_peak1_54_49_-0.145023888423785_5.57134424556283_0.338002390994162 chr1 92214830 92215427 + 0.338002390994162 NA Intergenic Intergenic -34787 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162-3 chr4 53713789 53714818 + 0.338002390994162 NA intron (NM_139309, intron 1 of 9) CpG 121 NM_139309 246179 Mm.247210 NM_139309 ENSMUSG00000028414 Fktn D830030O17Rik|Fcmd fukutin protein-coding common_peak2_59_45_0.099915609568872_5.57351976084145_0.338002390994162 chr15 38594363 38595213 + 0.338002390994162 NA intron (NR_045757, intron 1 of 2) intron (NR_045757, intron 1 of 2) 146 NR_045757 69679 Mm.416890 NR_045757 ENSMUSG00000102106 2310043O21Rik - RIKEN cDNA 2310043O21 gene ncRNA common_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162-4 chr4 103214234 103214851 + 0.338002390994162 NA intron (NM_177732, intron 1 of 9) CpG 634 NM_001356276 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding common_peak2_59_45_0.099915609568872_5.57351976084145_0.338002390994162-4 chr9 108049135 108049770 + 0.338002390994162 NA TTS (NM_013785) TTS (NM_013785) 188 NM_001357682 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding common_peak2_54_49_-0.145023888423785_5.57134424556283_0.338002390994162-3 chr14 69466974 69467929 + 0.338002390994162 NA Intergenic B1F|SINE|Alu 45098 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak2_59_45_0.099915609568872_5.57351976084145_0.338002390994162-2 chr7 113185542 113186037 + 0.338002390994162 NA Intergenic Intergenic -21676 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162-5 chr7 80688347 80689261 + 0.338002390994162 NA promoter-TSS (NM_173863) promoter-TSS (NM_173863) 73 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding common_peak1_54_49_-0.145023888423785_5.57134424556283_0.338002390994162-2 chr17 34204608 34205455 + 0.338002390994162 NA intron (NM_011530, intron 1 of 11) intron (NM_011530, intron 1 of 11) 552 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162-6 chr7 113185520 113186033 + 0.338002390994162 NA Intergenic Intergenic -21689 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162-2 chr11 31870929 31871732 + 0.338002390994162 NA 5' UTR (NM_001290676, exon 1 of 9) 5' UTR (NM_001290676, exon 1 of 9) 390 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_54_49_-0.145023888423785_5.57134424556283_0.338002390994162-3 chr5 53998632 53999244 + 0.338002390994162 NA exon (NM_001081103, exon 1 of 12) exon (NM_001081103, exon 1 of 12) 415 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_54_49_-0.145023888423785_5.57134424556283_0.338002390994162-2 chr11 118012987 118014241 + 0.338002390994162 NA intron (NR_151726, intron 7 of 9) intron (NR_151726, intron 7 of 9) 11344 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_59_45_0.099915609568872_5.57351976084145_0.338002390994162-3 chr9 22003054 22003556 + 0.338002390994162 NA promoter-TSS (NM_029939) promoter-TSS (NM_029939) 317 NM_001293650 19089 Mm.214593 NM_008925 ENSMUSG00000003402 Prkcsh 80K-H|PKCSH protein kinase C substrate 80K-H protein-coding common_peak2_54_49_-0.145023888423785_5.57134424556283_0.338002390994162 chr10 81704799 81705208 + 0.338002390994162 NA intron (NM_001243067, intron 1 of 3) CpG 178 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162 chr10 128980345 128980957 + 0.338002390994162 NA Intergenic Intergenic -9263 NM_146861 18373 Mm.377111 NM_146861 ENSMUSG00000069430 Olfr9 MOR269-3 olfactory receptor 9 protein-coding common_peak2_54_49_-0.145023888423785_5.57134424556283_0.338002390994162-4 chr4 88411577 88412391 + 0.338002390994162 NA TTS (NM_025760) TTS (NM_025760) 26942 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding unique_peak1_59_45_0.099915609568872_5.57351976084145_0.338002390994162 chr8 88698459 88699336 + 0.338002390994162 NA intron (NM_001128170, intron 1 of 17) intron (NM_001128170, intron 1 of 17) 1869 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak1_92_71_0.0813601403379245_6.21060507161127_0.33796692268184 chr14 54221477 54222485 + 0.33796692268184 NA Intergenic Intergenic 31948 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_92_71_0.0813601403379245_6.21060507161127_0.33796692268184 chr1 134361152 134361954 + 0.33796692268184 NA exon (NM_020588, exon 2 of 8) exon (NM_020588, exon 2 of 8) 446 NM_020588 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding common_peak2_86_76_-0.11103791709018_6.21126758214981_0.33796692268184 chr11 118247207 118248450 + 0.33796692268184 NA intron (NM_011180, intron 1 of 12) CpG 764 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_86_76_-0.11103791709018_6.21126758214981_0.33796692268184 chr6 49073606 49074630 + 0.33796692268184 NA intron (NM_029353, intron 1 of 3) CpG 323 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding common_peak2_86_76_-0.11103791709018_6.21126758214981_0.33796692268184-2 chr13 32494097 32495138 + 0.33796692268184 NA Intergenic Intergenic -156073 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236 chr18 34862167 34862670 + 0.337923771396236 NA intron (NM_007913, intron 1 of 1) intron (NM_007913, intron 1 of 1) 1211 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-10 chr4 41123885 41124204 + 0.337923771396236 NA intron (NM_139236, intron 1 of 25) intron (NM_139236, intron 1 of 25) 295 NM_139236 230082 Mm.285797 NM_139236 ENSMUSG00000028430 Nol6 AA410091|Nrap nucleolar protein family 6 (RNA-associated) protein-coding unique_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-3 chr15 41612788 41613277 + 0.337923771396236 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 163929 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-8 chr2 180256219 180256904 + 0.337923771396236 NA promoter-TSS (NM_025587) promoter-TSS (NM_025587) -818 NM_025587 66481 Mm.289669 NM_025587 ENSMUSG00000039001 Rps21 1810049N11Rik|2410030A14Rik ribosomal protein S21 protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-5 chr11 103094195 103094516 + 0.337923771396236 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 7303 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-11 chr3 158272989 158273666 + 0.337923771396236 NA intron (NM_001081358, intron 8 of 27) (TG)n|Simple_repeat|Simple_repeat 236645 NM_001289524 67144 Mm.358704 NM_024194 ENSMUSG00000063052 Lrrc40 2610040E16Rik|AI837674 leucine rich repeat containing 40 protein-coding unique_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-2 chr15 77076610 77077098 + 0.337923771396236 NA Intergenic Intergenic -7544 NR_108037 74303 Mm.444304 NR_108037 ENSMUSG00000097267 1700109K24Rik 4933425G21Rik RIKEN cDNA 1700109K24 gene ncRNA common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-4 chr12 81748274 81748767 + 0.337923771396236 NA intron (NM_001174107, intron 2 of 10) G-rich|Low_complexity|Low_complexity 32650 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-3 chr12 80219038 80219530 + 0.337923771396236 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 41087 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-10 chr7 64192070 64192578 + 0.337923771396236 NA intron (NM_018752, intron 1 of 13) intron (NM_018752, intron 1 of 13) 6865 NM_018752 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-3 chr15 101410996 101411584 + 0.337923771396236 NA Intergenic Intergenic -1113 NM_033073 110310 Mm.486285 NM_033073 ENSMUSG00000023039 Krt7 D15Wsu77e|K7|Krt2-7 keratin 7 protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-2 chr10 128525364 128525833 + 0.337923771396236 NA exon (NM_011843, exon 1 of 31) exon (NM_011843, exon 1 of 31) 261 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-3 chr11 16508322 16508707 + 0.337923771396236 NA promoter-TSS (NM_011343) promoter-TSS (NM_011343) -30 NM_001109971 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding unique_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236 chr11 58977036 58977812 + 0.337923771396236 NA promoter-TSS (NM_001290988) promoter-TSS (NM_001290988) -669 NM_001290988 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-7 chr19 47067953 47068237 + 0.337923771396236 NA exon (NM_177342, exon 1 of 11) exon (NM_177342, exon 1 of 11) 347 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding unique_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-2 chr2 180441980 180442425 + 0.337923771396236 NA Intergenic Intergenic -14043 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-8 chr5 31565092 31565564 + 0.337923771396236 NA Intergenic Intergenic 6069 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-2 chr13 35501684 35502162 + 0.337923771396236 NA Intergenic Intergenic -157939 NM_009881 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-5 chr2 157447686 157447931 + 0.337923771396236 NA intron (NM_001025395, intron 2 of 13) intron (NM_001025395, intron 2 of 13) 23515 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236 chr10 30618595 30619199 + 0.337923771396236 NA promoter-TSS (NM_025798) promoter-TSS (NM_025798) -531 NM_025798 66847 Mm.46218 NM_025798 ENSMUSG00000019791 Hint3 0610010I17Rik|AV009015|HINT-3|HINT-4|HINT4 histidine triad nucleotide binding protein 3 protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-3 chr11 88467477 88467870 + 0.337923771396236 NA intron (NM_054043, intron 7 of 13) intron (NM_054043, intron 7 of 13) 114900 NR_039545 100628571 NR_039545 ENSMUSG00000092985 Mir378b mir-378b|mmu-mir-378b microRNA 378b ncRNA common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-7 chr15 62325916 62326253 + 0.337923771396236 NA Intergenic Intergenic -106633 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-4 chr11 91065862 91066325 + 0.337923771396236 NA Intergenic Intergenic 261402 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-13 chr7 92561761 92562432 + 0.337923771396236 NA intron (NM_025515, intron 1 of 8) intron (NM_025515, intron 1 of 8) 947 NM_001162918 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-10 chr2 60877642 60878006 + 0.337923771396236 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 3614 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-5 chr19 4219920 4220385 + 0.337923771396236 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 5763 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236 chr1 155091846 155092366 + 0.337923771396236 NA Intergenic Intergenic 7530 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-9 chr3 61442071 61442589 + 0.337923771396236 NA Intergenic Intergenic 77823 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-4 chr19 43963335 43963832 + 0.337923771396236 NA intron (NM_030703, intron 7 of 8) intron (NM_030703, intron 7 of 8) 22937 NM_030703 93721 Mm.206774 NM_030703 ENSMUSG00000025196 Cpn1 0610011F20Rik|CPN carboxypeptidase N, polypeptide 1 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-13 chr9 50746160 50746522 + 0.337923771396236 NA intron (NM_025865, intron 1 of 3) intron (NM_025865, intron 1 of 3) 180 NM_025865 66952 Mm.273375 NM_025865 ENSMUSG00000032062 2310030G06Rik 2610024D04Rik|AV017521 RIKEN cDNA 2310030G06 gene protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-5 chr16 44346995 44347740 + 0.337923771396236 NA promoter-TSS (NM_144550) promoter-TSS (NM_144550) -34 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-8 chr15 77055985 77056472 + 0.337923771396236 NA 3' UTR (NM_028010, exon 5 of 5) 3' UTR (NM_028010, exon 5 of 5) -5560 NM_013593 17189 Mm.404074 NM_013593 ENSMUSG00000018893 Mb AI325109 myoglobin protein-coding unique_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-3 chr3 89213417 89213948 + 0.337923771396236 NA intron (NM_001357367, intron 1 of 6) CpG 653 NM_013604 17827 Mm.280943 NM_013604 ENSMUSG00000064068 Mtx1 Gcap6|Mtx metaxin 1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-2 chr12 70452785 70453456 + 0.337923771396236 NA promoter-TSS (NM_028339) promoter-TSS (NM_028339) -34 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding unique_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236 chr12 108503825 108504355 + 0.337923771396236 NA intron (NM_001286347, intron 6 of 22) intron (NM_001286347, intron 6 of 22) -50630 NM_001163394 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774|b2b2600Clo Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-7 chr5 137076720 137077013 + 0.337923771396236 NA Intergenic Intergenic -4594 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-6 chr2 158166845 158167105 + 0.337923771396236 NA Intergenic Intergenic -20583 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-9 chr19 38038672 38039070 + 0.337923771396236 NA intron (NM_001302140, intron 1 of 53) B4A|SINE|B4 4706 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding unique_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-2 chr11 83817713 83818422 + 0.337923771396236 NA Intergenic Intergenic -32802 NM_001291268 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-7 chr5 24751564 24752084 + 0.337923771396236 NA intron (NM_153076, intron 3 of 3) intron (NM_153076, intron 3 of 3) 6019 NM_153076 214301 Mm.63484 NM_153076 ENSMUSG00000038135 Crygn - crystallin, gamma N protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-11 chr5 134315126 134315451 + 0.337923771396236 NA promoter-TSS (NM_001080749) promoter-TSS (NM_001080749) -528 NM_010365 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-4 chr18 35498622 35498920 + 0.337923771396236 NA intron (NM_030749, intron 1 of 9) CpG 154 NM_030749 81500 Mm.291482 NM_030749 ENSMUSG00000024357 Sil1 1810057E01Rik|AI042831|wz endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-6 chr5 125404923 125405425 + 0.337923771396236 NA Intergenic Intergenic -15157 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236 chr1 51477244 51477812 + 0.337923771396236 NA exon (NM_028696, exon 2 of 6) exon (NM_028696, exon 2 of 6) 871 NM_001310548 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-9 chr5 145084087 145084507 + 0.337923771396236 NA intron (NM_019767, intron 1 of 9) intron (NM_019767, intron 1 of 9) 428 NM_019767 56443 Mm.371610 NM_019767 ENSMUSG00000029621 Arpc1a 0610010H08Rik|1110030K07Rik|41kDa|AA407347|Sid32|Sid329 actin related protein 2/3 complex, subunit 1A protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-6 chr12 108792462 108792687 + 0.337923771396236 NA promoter-TSS (NM_009537) promoter-TSS (NM_009537) -737 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-12 chr5 64175562 64175850 + 0.337923771396236 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) 15446 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_33_25_0.10939113919536_4.75513528773877_0.337923771396236-11 chr9 110408417 110408921 + 0.337923771396236 NA promoter-TSS (NM_001081043) promoter-TSS (NM_001081043) -459 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-12 chr6 100218801 100219132 + 0.337923771396236 NA Intergenic Intergenic 68392 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-2 chr1 152793970 152794257 + 0.337923771396236 NA Intergenic Intergenic -6040 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak1_33_25_0.10939113919536_4.75513528773877_0.337923771396236-6 chr17 78403658 78403877 + 0.337923771396236 NA intron (NM_001360407, intron 3 of 9) intron (NM_001360407, intron 3 of 9) 14385 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_29_28_-0.227448449928443_4.74425677016335_0.337923771396236 chr1 74587810 74588078 + 0.337923771396236 NA promoter-TSS (NM_001310668) promoter-TSS (NM_001310668) 84 NM_029888 77264 Mm.207298 NM_029888 ENSMUSG00000026135 Zfp142 9330177B18Rik|BB154236|mKIAA0236 zinc finger protein 142 protein-coding common_peak1_29_28_-0.227448449928443_4.74425677016335_0.337923771396236-8 chr8 72144755 72145042 + 0.337923771396236 NA intron (NM_001001491, intron 4 of 7) intron (NM_001001491, intron 4 of 7) 9606 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak2_132_103_0.0633278064049412_6.73210362134356_0.337908979693415 chr1 34108915 34110793 + 0.337908979693415 NA intron (NM_001276764, intron 5 of 102) intron (NM_001276764, intron 5 of 102) -7505 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak1_298_234_0.0477245263220833_7.90037920972604_0.337906243611865 chr11 60104982 60107211 + 0.337906243611865 NA intron (NM_009021, intron 1 of 5) CpG 1083 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_180_141_0.0554474705534442_7.1774708547814_0.337850948774408 chr13 17211854 17213562 + 0.337850948774408 NA intron (NM_138654, intron 12 of 13) intron (NM_138654, intron 12 of 13) 482057 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_237_186_0.0504854878764567_7.57213720382586_0.337604864585193 chr7 113149638 113151606 + 0.337604864585193 NA Intergenic Intergenic -8607 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_301_236_0.0497996757855352_7.91364308679103_0.337599544481518 chr8 54527927 54529866 + 0.337599544481518 NA intron (NM_029701, intron 1 of 4) intron (NM_029701, intron 1 of 4) 1102 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_182_142_0.0610653551786973_7.19040401436774_0.337597834806264 chr11 59809130 59810406 + 0.337597834806264 NA promoter-TSS (NR_045686) promoter-TSS (NR_045686) -167 NM_001271357 216805 Mm.339640 NM_146018 ENSMUSG00000032633 Flcn AU014660|B430214A04Rik|Bhd|FLCL folliculin protein-coding common_peak2_87_77_-0.113281795838433_6.22876132094303_0.337470937500802 chr14 29080971 29082091 + 0.337470937500802 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 63323 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak1_93_72_0.0767817648487927_6.22821544130441_0.337470937500802-2 chr3 52676507 52677344 + 0.337470937500802 NA Intergenic Intergenic -62799 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_93_72_0.0767817648487927_6.22821544130441_0.337470937500802 chr18 80468824 80469857 + 0.337470937500802 NA exon (NM_026295, exon 1 of 13) exon (NM_026295, exon 1 of 13) 327 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak2_87_77_-0.113281795838433_6.22876132094303_0.337470937500802-2 chrX 103980261 103981233 + 0.337470937500802 NA intron (NM_001358205, intron 1 of 4) CpG 538 NM_001358205 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding common_peak2_93_72_0.0767817648487927_6.22821544130441_0.337470937500802 chr7 98485724 98486435 + 0.337470937500802 NA Intergenic Intergenic -8143 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_239_187_0.0547787548017586_7.58197822907852_0.337413345048429 chr4 95050105 95052220 + 0.337413345048429 NA exon (NM_010591, exon 1 of 1) exon (NM_010591, exon 1 of 1) 1060 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_174_150_-0.0815018071718843_7.19765383573914_0.337348177312279 chr18 35118379 35120043 + 0.337348177312279 NA intron (NM_009818, intron 1 of 17) CpG 299 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-12 chr2 117475531 117475846 + 0.337263207250336 NA Intergenic Intergenic -132811 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-32 chr7 37929989 37930192 + 0.337263207250336 NA Intergenic Intergenic 89462 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-40 chr9 60687521 60687818 + 0.337263207250336 NA promoter-TSS (NM_001146047) promoter-TSS (NM_001146047) -135 NM_001146047 102747 Mm.269413 NM_145616 ENSMUSG00000047766 Lrrc49 AI430817|AW050057|D430025H09Rik|PGs4|p79 leucine rich repeat containing 49 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-7 chr12 52337330 52337574 + 0.337263207250336 NA Intergenic Intergenic 143157 NR_136881 102638611 Mm.363799 NR_136881 ENSMUSG00000111982 Gm35135 - predicted gene, 35135 ncRNA unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-5 chr2 130877503 130877721 + 0.337263207250336 NA intron (NR_015523, intron 1 of 2) intron (NR_015523, intron 1 of 2) 28784 NR_015523 613258 Mm.271990 NR_015523 A730017L22Rik - RIKEN cDNA A730017L22 gene ncRNA common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-5 chr17 12194810 12195032 + 0.337263207250336 NA intron (NM_026644, intron 2 of 8) intron (NM_026644, intron 2 of 8) 75637 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-6 chr10 4162113 4162362 + 0.337263207250336 NA intron (NM_001170785, intron 27 of 27) intron (NM_001170785, intron 27 of 27) 50883 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-27 chr4 101203139 101203440 + 0.337263207250336 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 61993 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-18 chr7 140116618 140116955 + 0.337263207250336 NA promoter-TSS (NM_053119) promoter-TSS (NM_053119) -363 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-10 chr19 17340526 17340764 + 0.337263207250336 NA intron (NM_010265, intron 1 of 2) intron (NM_010265, intron 1 of 2) -1140 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-2 chr11 96340848 96341086 + 0.337263207250336 NA intron (NM_001079869, intron 1 of 3) CpG -2802 NM_010458 15410 Mm.342481 NM_010458 ENSMUSG00000048763 Hoxb3 Hox-2.7 homeobox B3 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-6 chr11 8457740 8458035 + 0.337263207250336 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 206648 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-4 chr16 91761394 91761656 + 0.337263207250336 NA intron (NM_001110276, intron 1 of 15) intron (NM_001110276, intron 1 of 15) 32154 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-23 chr9 40731263 40731477 + 0.337263207250336 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) 45406 NM_133733 71566 Mm.280560 NM_133733 ENSMUSG00000032024 Clmp 9030425E11Rik|ACAM|ASP5|AW557819 CXADR-like membrane protein protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-36 chr7 112291160 112291373 + 0.337263207250336 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 65430 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-6 chr15 65867447 65867843 + 0.337263207250336 NA intron (NM_133766, intron 22 of 22) intron (NM_133766, intron 22 of 22) 44609 NM_001347038 18256 Mm.41776 NM_010953 ENSMUSG00000015001 Oc90 Ocn-95|PLA2L|Pla2ll|oc95 otoconin 90 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-9 chr13 43480892 43481181 + 0.337263207250336 NA promoter-TSS (NM_019930) promoter-TSS (NM_019930) -63 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-37 chr7 126135170 126135374 + 0.337263207250336 NA intron (NM_028816, intron 9 of 23) intron (NM_028816, intron 9 of 23) -52861 NM_001358885 269994 Mm.39599 NM_001101488 ENSMUSG00000046182 Gsg1l AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l GSG1-like protein-coding common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-2 chr13 5841027 5841226 + 0.337263207250336 NA Intergenic Intergenic 16966 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-20 chr7 45680840 45681081 + 0.337263207250336 NA intron (NM_001271578, intron 3 of 3) intron (NM_001271578, intron 3 of 3) -3062 NM_001358870 243967 Mm.291240 NM_001033356 ENSMUSG00000070564 Ntn5 Gm484 netrin 5 protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-7 chr8 110997989 110998425 + 0.337263207250336 NA promoter-TSS (NM_007916) promoter-TSS (NM_007916) -384 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-20 chr18 36499467 36499722 + 0.337263207250336 NA Intergenic B1_Mur2|SINE|Alu 16211 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-8 chr17 35628188 35628421 + 0.337263207250336 NA Intergenic Intergenic -1667 NM_001244654 672682 Mm.454025 NM_001244654 ENSMUSG00000090588 Gm9573 Muc21 predicted gene 9573 protein-coding common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-3 chr13 49549440 49549673 + 0.337263207250336 NA intron (NM_001172481, intron 1 of 7) intron (NM_001172481, intron 1 of 7) 5113 NM_025711 66695 Mm.383216 NM_025711 ENSMUSG00000021388 Aspn 4631401G09Rik|AA986886|Plap1|Slrr1c asporin protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-14 chr3 83845544 83845769 + 0.337263207250336 NA Intergenic Intergenic -4048 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-19 chrX 36598354 36598622 + 0.337263207250336 NA exon (NM_016783, exon 1 of 3) exon (NM_016783, exon 1 of 3) 295 NM_016783 53328 Mm.9052 NM_016783 ENSMUSG00000006373 Pgrmc1 AA415812|HPR6.6|PPMR|Vema|mPR progesterone receptor membrane component 1 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-3 chr10 19162486 19162747 + 0.337263207250336 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) -4622 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-41 chr9 64114464 64114655 + 0.337263207250336 NA Intergenic Intergenic -2588 NM_145835 235435 Mm.436581 NM_145835 ENSMUSG00000032401 Lctl E130104I05Rik|KLPH lactase-like protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-16 chr6 67014292 67014514 + 0.337263207250336 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -22196 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-14 chr2 91062895 91063146 + 0.337263207250336 NA intron (NR_110981, intron 7 of 7) intron (NR_110981, intron 7 of 7) 7295 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-3 chr1 172241901 172242147 + 0.337263207250336 NA intron (NM_013734, intron 11 of 22) B1_Mur1|SINE|Alu 16400 NM_013734 27222 Mm.482392 NM_013734 ENSMUSG00000007107 Atp1a4 - ATPase, Na+/K+ transporting, alpha 4 polypeptide protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-8 chr9 35199188 35199462 + 0.337263207250336 NA intron (NM_001177845, intron 1 of 6) intron (NM_001177845, intron 1 of 6) 580 NM_001177847 117149 Mm.23987 NM_054096 ENSMUSG00000032041 Tirap AA407980|C130027E04Rik|Mal|Tlr4ap|Wyatt toll-interleukin 1 receptor (TIR) domain-containing adaptor protein protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-14 chr16 13611792 13612155 + 0.337263207250336 NA intron (NM_001358453, intron 17 of 22) intron (NM_001358453, intron 17 of 22) 56197 NM_001358452 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-8 chr2 35337256 35337468 + 0.337263207250336 NA promoter-TSS (NM_013515) promoter-TSS (NM_013515) -353 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336 chr10 19162470 19162669 + 0.337263207250336 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) -4669 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-38 chr9 6538888 6539091 + 0.337263207250336 NA Intergenic Intergenic -272442 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-11 chr2 128420842 128421154 + 0.337263207250336 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 8353 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-4 chr15 51189814 51190074 + 0.337263207250336 NA Intergenic Intergenic 205666 NR_045092 100502643 Mm.131987 NR_045092 ENSMUSG00000115654 Gm19303 - predicted gene, 19303 ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-13 chr3 49741770 49742101 + 0.337263207250336 NA Intergenic Intergenic 15381 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-18 chr17 36130266 36130528 + 0.337263207250336 NA promoter-TSS (NM_001177467) promoter-TSS (NM_001177467) -972 NM_001177467 630294 Mm.484916 NM_001177467 ENSMUSG00000092243 Gm7030 EG630294|H2-t9 predicted gene 7030 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-3 chr15 53676131 53676339 + 0.337263207250336 NA intron (NM_177225, intron 3 of 4) LTR16A|LTR|ERVL -61956 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-33 chr7 43408819 43409060 + 0.337263207250336 NA exon (NM_172900, exon 3 of 12) exon (NM_172900, exon 3 of 12) 659 NM_172900 243958 Mm.24444 NM_172900 ENSMUSG00000030468 Siglecg 9830164H23|A630096C01Rik|Siglec-G|Siglec10|mSiglec-G sialic acid binding Ig-like lectin G protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-18 chr7 67466611 67466871 + 0.337263207250336 NA Intergenic Intergenic -93883 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-8 chr7 112306372 112306607 + 0.337263207250336 NA intron (NM_001193305, intron 4 of 25) intron (NM_001193305, intron 4 of 25) -61819 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-7 chr19 16286600 16286827 + 0.337263207250336 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 28291 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336 chr1 182017367 182017595 + 0.337263207250336 NA intron (NM_001083121, intron 1 of 13) intron (NM_001083121, intron 1 of 13) 2499 NM_010135 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-17 chr6 88965527 88965731 + 0.337263207250336 NA Intergenic Intergenic 63378 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-4 chr13 107676706 107676912 + 0.337263207250336 NA Intergenic Intergenic -10588 NR_045900 72257 Mm.234155 NR_045900 ENSMUSG00000102000 1700006H21Rik - RIKEN cDNA 1700006H21 gene ncRNA common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-13 chr2 158070925 158071180 + 0.337263207250336 NA intron (NM_001291135, intron 7 of 7) intron (NM_001291135, intron 7 of 7) 20745 NR_040609 72340 Mm.443395 NR_040609 ENSMUSG00000100860 2010009K17Rik - RIKEN cDNA 2010009K17 gene ncRNA common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-5 chr5 64505935 64506126 + 0.337263207250336 NA Intergenic Intergenic 29022 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-5 chr10 19154490 19154728 + 0.337263207250336 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) -12629 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336 chr1 33997149 33997361 + 0.337263207250336 NA intron (NM_001276764, intron 3 of 102) intron (NM_001276764, intron 3 of 102) -14570 NM_133833 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336 chr1 125700958 125701208 + 0.337263207250336 NA intron (NM_027677, intron 1 of 1) intron (NM_027677, intron 1 of 1) 24087 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-11 chr2 15526737 15526970 + 0.337263207250336 NA intron (NM_001310455, intron 1 of 38) intron (NM_001310455, intron 1 of 38) 374 NM_001310455 102635496 NM_001310455 ENSMUSG00000075520 Malrd1 Diet1|Gm13318|Gm13364 MAM and LDL receptor class A domain containing 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-39 chr9 45933525 45933721 + 0.337263207250336 NA intron (NM_011526, intron 1 of 4) intron (NM_011526, intron 1 of 4) 2435 NM_011526 21345 Mm.283283 NM_011526 ENSMUSG00000032085 Tagln Sm22|Sm22a|Ws310 transgelin protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-42 chr9 74997772 74998097 + 0.337263207250336 NA intron (NM_153584, intron 1 of 11) intron (NM_153584, intron 1 of 11) 21823 NM_153584 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336 chr1 153202766 153203018 + 0.337263207250336 NA Intergenic Intergenic -16445 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-7 chr5 148632044 148632266 + 0.337263207250336 NA Intergenic Intergenic -79367 NM_001359199 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-4 chr10 12726025 12726266 + 0.337263207250336 NA intron (NM_011682, intron 16 of 73) intron (NM_011682, intron 16 of 73) 135590 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-34 chr7 45680409 45680606 + 0.337263207250336 NA intron (NM_001271578, intron 3 of 3) B1_Mur4|SINE|Alu -3515 NM_001358870 243967 Mm.291240 NM_001033356 ENSMUSG00000070564 Ntn5 Gm484 netrin 5 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-10 chr2 91299559 91299758 + 0.337263207250336 NA intron (NM_175123, intron 4 of 8) intron (NM_175123, intron 4 of 8) 34543 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-7 chr13 63243839 63244043 + 0.337263207250336 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 3912 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-17 chr16 93907187 93907398 + 0.337263207250336 NA Intergenic Intergenic 22275 NM_001165925 56173 Mm.328716 NM_019500 ENSMUSG00000047109 Cldn14 AI851731 claudin 14 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-16 chr3 137293585 137293805 + 0.337263207250336 NA Intergenic Intergenic -47383 NM_001163522 59308 Mm.27343 NM_016885 ENSMUSG00000054690 Emcn 0610012K22Rik|AI315669|Muc14 endomucin protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-19 chr17 45792619 45792955 + 0.337263207250336 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 58281 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-19 chr7 67960201 67960448 + 0.337263207250336 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 8067 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-8 chr12 55465809 55466197 + 0.337263207250336 NA Intergenic Intergenic 26644 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-16 chr2 118389573 118389786 + 0.337263207250336 NA intron (NM_001177806, intron 1 of 37) L2a|LINE|L2 567 NM_001177806 27103 Mm.217616 NM_013719 ENSMUSG00000005102 Eif2ak4 2610011M03|GCN2|MGCN2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-6 chr13 41385980 41386227 + 0.337263207250336 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -27102 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-6 chr18 4672529 4672766 + 0.337263207250336 NA exon (NM_001081963, exon 3 of 4) exon (NM_001081963, exon 3 of 4) 37718 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-21 chr8 70565521 70565822 + 0.337263207250336 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 25996 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-23 chr9 27191848 27192091 + 0.337263207250336 NA Intergenic Intergenic -36548 NM_023277 83964 Mm.28770 NM_023277 ENSMUSG00000031990 Jam3 1110002N23Rik|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-3 chr1 127345465 127345692 + 0.337263207250336 NA intron (NM_145128, intron 4 of 17) intron (NM_145128, intron 4 of 17) 140592 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-16 chr4 152573989 152574254 + 0.337263207250336 NA Intergenic Intergenic 95979 NM_153424 260305 Mm.302496 NM_153424 ENSMUSG00000039577 Nphp4 4930564O18Rik|nmf192 nephronophthisis 4 (juvenile) homolog (human) protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-17 chr2 180071139 180071386 + 0.337263207250336 NA intron (NM_181424, intron 1 of 9) intron (NM_181424, intron 1 of 9) 669 NM_001083329 52856 Mm.219658 NM_028422 ENSMUSG00000039069 Mtg2 1810011P19Rik|2900056P18Rik|D2Bwg0647e|Gtpbp5 mitochondrial ribosome associated GTPase 2 protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-11 chr2 130563239 130563553 + 0.337263207250336 NA promoter-TSS (NM_207207) promoter-TSS (NM_207207) 353 NR_040348 321014 Mm.442588 NR_040348 ENSMUSG00000060029 4930473A02Rik - RIKEN cDNA 4930473A02 gene ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-25 chr4 53441020 53441328 + 0.337263207250336 NA intron (NM_133891, intron 1 of 15) intron (NM_133891, intron 1 of 15) 761 NM_133891 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-35 chr7 81182632 81182949 + 0.337263207250336 NA Intergenic Intergenic -31014 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-13 chr15 62092241 62092458 + 0.337263207250336 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 53092 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336 chr1 40543943 40544292 + 0.337263207250336 NA intron (NM_010553, intron 11 of 12) intron (NM_010553, intron 11 of 12) 28755 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-8 chr12 105556741 105556976 + 0.337263207250336 NA Intergenic Intergenic -6314 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-13 chr2 128420766 128421159 + 0.337263207250336 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 8389 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-5 chr11 16897399 16897709 + 0.337263207250336 NA intron (NM_207655, intron 20 of 27) intron (NM_207655, intron 20 of 27) 53728 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-15 chr3 87175105 87175377 + 0.337263207250336 NA promoter-TSS (NM_130867) promoter-TSS (NM_130867) -494 NM_130867 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-6 chr7 16048537 16048888 + 0.337263207250336 NA Intergenic Intergenic -23133 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-13 chr2 85049864 85050150 + 0.337263207250336 NA promoter-TSS (NM_001081260) promoter-TSS (NM_001081260) -453 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-23 chr2 167539228 167539466 + 0.337263207250336 NA intron (NM_011427, intron 2 of 2) intron (NM_011427, intron 2 of 2) 1152 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-15 chr16 44632152 44632354 + 0.337263207250336 NA Intergenic Intergenic -73383 NM_172506 117606 Mm.41561 NM_172506 ENSMUSG00000022687 Boc 4732455C11|mFLJ00376 biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-22 chr8 125996102 125996417 + 0.337263207250336 NA intron (NM_008430, intron 1 of 2) intron (NM_008430, intron 1 of 2) 1157 NM_008430 16525 Mm.10800 NM_008430 ENSMUSG00000033998 Kcnk1 AI788889|TWIK-1 potassium channel, subfamily K, member 1 protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-9 chr7 125491112 125491394 + 0.337263207250336 NA intron (NM_001360659, intron 1 of 7) AT_rich|Low_complexity|Low_complexity 289 NM_001360659 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-12 chr2 155930528 155930806 + 0.337263207250336 NA promoter-TSS (NM_018888) promoter-TSS (NM_018888) -357 NM_001355441 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-2 chr1 168429585 168429813 + 0.337263207250336 NA intron (NM_183355, intron 1 of 8) intron (NM_183355, intron 1 of 8) 2470 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-28 chr4 119253664 119253946 + 0.337263207250336 NA Intergenic Intergenic -1636 NM_153105 242653 Mm.130701 NM_153105 ENSMUSG00000066058 Cldn19 - claudin 19 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-9 chr2 85060927 85061155 + 0.337263207250336 NA intron (NM_001081260, intron 5 of 11) intron (NM_001081260, intron 5 of 11) 10581 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-9 chr17 83953670 83953937 + 0.337263207250336 NA Intergenic Intergenic -44749 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-18 chr5 38445577 38445895 + 0.337263207250336 NA intron (NM_145559, intron 4 of 10) intron (NM_145559, intron 4 of 10) 34570 NM_001102414 117591 Mm.260137 NM_145559 ENSMUSG00000005107 Slc2a9 Glut9|SLC2A9B|SLC2a9A solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-15 chr4 32523134 32523584 + 0.337263207250336 NA intron (NM_001109661, intron 2 of 4) intron (NM_001109661, intron 2 of 4) 48303 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-14 chr3 95693506 95693740 + 0.337263207250336 NA Intergenic Intergenic -5706 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-2 chr1 189867813 189868227 + 0.337263207250336 NA intron (NM_008976, intron 18 of 18) intron (NM_008976, intron 18 of 18) 54271 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-12 chr15 27783486 27783682 + 0.337263207250336 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -102042 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-4 chr15 64532066 64532326 + 0.337263207250336 NA Intergenic Intergenic -149277 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-7 chr12 84362212 84362433 + 0.337263207250336 NA promoter-TSS (NM_172581) promoter-TSS (NM_172581) 354 NM_172582 217707 Mm.280062 NM_172582 ENSMUSG00000021235 Coq6 5930427M12Rik|AW742344 coenzyme Q6 monooxygenase protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-8 chr15 80052221 80052455 + 0.337263207250336 NA Intergenic Intergenic 26241 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-9 chr18 60618615 60618883 + 0.337263207250336 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 5556 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-21 chr8 22490783 22491079 + 0.337263207250336 NA intron (NM_011394, intron 1 of 10) MT2B1|LTR|ERVL -14052 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336 chr11 4660753 4661059 + 0.337263207250336 NA intron (NM_029291, intron 8 of 19) intron (NM_029291, intron 8 of 19) 23113 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-26 chr4 95049702 95049896 + 0.337263207250336 NA 3' UTR (NM_010591, exon 1 of 1) 3' UTR (NM_010591, exon 1 of 1) 2423 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-19 chr6 88934028 88934284 + 0.337263207250336 NA Intergenic Intergenic 31905 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-4 chr10 76651460 76651671 + 0.337263207250336 NA Intergenic Intergenic -27935 NM_001347207 12834 Mm.1949 NM_146007 ENSMUSG00000020241 Col6a2 Col6a-2 collagen, type VI, alpha 2 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-11 chr14 70308990 70309472 + 0.337263207250336 NA intron (NM_144808, intron 8 of 9) intron (NM_144808, intron 8 of 9) -19734 NM_001304992 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-7 chr8 69938823 69939017 + 0.337263207250336 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) 35463 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-5 chr15 59819097 59819331 + 0.337263207250336 NA Intergenic Intergenic -24255 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-24 chr9 49814558 49814784 + 0.337263207250336 NA Intergenic Intergenic -15278 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-3 chr15 27803453 27803684 + 0.337263207250336 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -122026 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-18 chr8 33824781 33825077 + 0.337263207250336 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -77159 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336 chr1 82595618 82595887 + 0.337263207250336 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 8831 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-10 chr18 75659805 75660047 + 0.337263207250336 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 37770 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-15 chr2 116066800 116067057 + 0.337263207250336 NA promoter-TSS (NR_153841) promoter-TSS (NR_153841) -297 NR_153841 654793 Mm.448948 NR_153841 G630016G05Rik - RIKEN cDNA G630016G05 gene ncRNA unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-4 chr2 155873566 155873928 + 0.337263207250336 NA intron (NM_001355443, intron 7 of 9) intron (NM_001355443, intron 7 of 9) -38893 NM_027788 71405 Mm.260918 NM_027788 ENSMUSG00000074647 Fam83c 5530400B04Rik family with sequence similarity 83, member C protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-21 chr19 44902453 44902705 + 0.337263207250336 NA Intergenic Intergenic -28540 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-20 chr8 24864241 24864595 + 0.337263207250336 NA exon (NM_153397, exon 18 of 22) exon (NM_153397, exon 18 of 22) -40049 NM_001272059 11499 Mm.143889 NM_007401 ENSMUSG00000031554 Adam5 tMDC II|tMDCII a disintegrin and metallopeptidase domain 5 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-15 chr6 51117442 51117735 + 0.337263207250336 NA Intergenic Intergenic 152322 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-30 chr6 108065047 108065272 + 0.337263207250336 NA exon (NM_178391, exon 1 of 2) exon (NM_178391, exon 1 of 2) 114 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-3 chr13 5837825 5838015 + 0.337263207250336 NA Intergenic ID_B1|SINE|B4 20172 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-22 chr8 94973175 94973466 + 0.337263207250336 NA Intergenic Intergenic -3789 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-4 chr1 182020912 182021130 + 0.337263207250336 NA Intergenic Intergenic -1041 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-2 chr1 64788145 64788423 + 0.337263207250336 NA TTS (NM_001039493) TTS (NM_001039493) -50534 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-43 chr9 83972276 83972575 + 0.337263207250336 NA intron (NM_199195, intron 3 of 10) intron (NM_199195, intron 3 of 10) 23644 NM_199195 12040 Mm.12819 NM_199195 ENSMUSG00000032263 Bckdhb BCKDE1B|BCKDH E1-beta branched chain ketoacid dehydrogenase E1, beta polypeptide protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-12 chr3 21936279 21936529 + 0.337263207250336 NA Intergenic Intergenic -140248 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-24 chr3 65625835 65626218 + 0.337263207250336 NA Intergenic Intergenic -33262 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-3 chr15 41399241 41399441 + 0.337263207250336 NA Intergenic Intergenic -48141 NR_152565 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-10 chr13 94155060 94155316 + 0.337263207250336 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 97392 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-11 chr2 38548161 38548367 + 0.337263207250336 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 36388 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-2 chr1 89689334 89689551 + 0.337263207250336 NA intron (NM_001037136, intron 9 of 16) MTE2b|LTR|ERVL-MaLR -5550 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-17 chr5 129847182 129847459 + 0.337263207250336 NA TTS (NM_009838) TTS (NM_009838) 330 NM_026445 67902 Mm.103546 NM_026445 ENSMUSG00000025538 Sumf2 2610040F05Rik sulfatase modifying factor 2 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-9 chr13 90799706 90799968 + 0.337263207250336 NA Intergenic Intergenic 105518 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-25 chrX 140456781 140457035 + 0.337263207250336 NA intron (NM_021463, intron 1 of 6) CpG 305 NM_021463 19139 Mm.287178 NM_021463 ENSMUSG00000031432 Prps1 2310010D17Rik|C76571|C76678|PRS-I|Prps-1 phosphoribosyl pyrophosphate synthetase 1 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-31 chr6 117049186 117049514 + 0.337263207250336 NA Intergenic Intergenic -119185 NM_001012477 20315 Mm.303231 NM_013655 ENSMUSG00000061353 Cxcl12 Pbsf|Scyb12|Sdf1|Tlsf|Tpar1 chemokine (C-X-C motif) ligand 12 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-5 chr1 193298737 193298970 + 0.337263207250336 NA Intergenic Intergenic -3141 NM_008484 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-14 chr4 87850422 87850683 + 0.337263207250336 NA intron (NM_027326, intron 4 of 10) intron (NM_027326, intron 4 of 10) -44229 NM_029931 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-6 chr5 140504491 140504726 + 0.337263207250336 NA Intergenic Intergenic -1001 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak2_15_11_0.14507754349664_3.65750127246948_0.337263207250336-5 chr2 157457092 157457468 + 0.337263207250336 NA exon (NM_009271, exon 4 of 15) exon (NM_009271, exon 4 of 15) 32987 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-22 chr2 110018026 110018230 + 0.337263207250336 NA exon (NM_026613, exon 1 of 6) exon (NM_026613, exon 1 of 6) 311 NR_149736 68201 Mm.181767 NM_026613 ENSMUSG00000027160 Ccdc34 2810027O19Rik|4930522P10Rik|AI596202 coiled-coil domain containing 34 protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-2 chr13 35740673 35741041 + 0.337263207250336 NA promoter-TSS (NM_001123386) promoter-TSS (NM_001123386) -545 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-24 chr9 106368249 106368498 + 0.337263207250336 NA promoter-TSS (NM_153459) promoter-TSS (NM_153459) -259 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-17 chr7 99353429 99353679 + 0.337263207250336 NA promoter-TSS (NM_009825) promoter-TSS (NM_009825) -315 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-6 chr6 38636436 38636650 + 0.337263207250336 NA exon (NM_001033171, exon 1 of 5) exon (NM_001033171, exon 1 of 5) 696 NM_001033171 74253 Mm.121859 NM_001033171 ENSMUSG00000071537 Klrg2 2310020F24Rik killer cell lectin-like receptor subfamily G, member 2 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-29 chr6 35274085 35274446 + 0.337263207250336 NA intron (NM_172892, intron 13 of 15) intron (NM_172892, intron 13 of 15) 21533 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-12 chr2 32527809 32528020 + 0.337263207250336 NA Intergenic Intergenic -7445 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-10 chr19 17140174 17140377 + 0.337263207250336 NA intron (NM_181348, intron 9 of 19) intron (NM_181348, intron 9 of 19) 184157 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-2 chr1 133130353 133130579 + 0.337263207250336 NA promoter-TSS (NM_133819) promoter-TSS (NM_133819) -700 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-16 chr16 50529859 50530192 + 0.337263207250336 NA intron (NR_040379, intron 1 of 5) intron (NR_040379, intron 1 of 5) 1523 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA unique_peak2_12_13_-0.374761768029246_3.61997403804298_0.337263207250336-7 chr17 23996227 23996499 + 0.337263207250336 NA exon (NM_133731, exon 4 of 6) exon (NM_133731, exon 4 of 6) 1737 NM_133731 70835 Mm.157351 NM_133731 ENSMUSG00000045027 Prss22 4733401N09Rik|BSSP-4|SP001LA protease, serine 22 protein-coding unique_peak1_15_11_0.14507754349664_3.65750127246948_0.337263207250336-44 chr9 87845626 87845922 + 0.337263207250336 NA Intergenic Intergenic -114514 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding common_peak1_55_50_-0.147781227752815_5.59853472809509_0.337231681760967 chr13 60048194 60048904 + 0.337231681760967 NA intron (NR_046142, intron 1 of 2) intron (NR_046142, intron 1 of 2) 18838 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-3 chr12 98049417 98050447 + 0.337231681760967 NA Intergenic Intergenic 209527 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding unique_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967 chr15 10796424 10797277 + 0.337231681760967 NA Intergenic Intergenic -32201 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak2_55_50_-0.147781227752815_5.59853472809509_0.337231681760967-2 chr11 23894476 23895182 + 0.337231681760967 NA intron (NM_172555, intron 1 of 21) CpG 441 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak2_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-2 chr14 57759496 57760350 + 0.337231681760967 NA Intergenic Intergenic -13800 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-6 chr9 121759206 121759942 + 0.337231681760967 NA promoter-TSS (NM_001166644) promoter-TSS (NM_001166644) 369 NR_033503 320301 Mm.373883 NR_033503 E530011L22Rik - RIKEN cDNA E530011L22 gene ncRNA common_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-5 chr7 66383505 66384159 + 0.337231681760967 NA intron (NM_146191, intron 1 of 33) intron (NM_146191, intron 1 of 33) -2108 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_55_50_-0.147781227752815_5.59853472809509_0.337231681760967 chr11 6527741 6528467 + 0.337231681760967 NA intron (NR_045893, intron 2 of 3) intron (NR_045893, intron 2 of 3) 656 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974 small nucleolar RNA host gene 15 ncRNA common_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967 chr1 58795566 58796055 + 0.337231681760967 NA intron (NM_009812, intron 1 of 8) CpG 436 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak2_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-4 chr5 65436086 65436435 + 0.337231681760967 NA promoter-TSS (NM_009466) promoter-TSS (NM_009466) -418 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-2 chr1 62707144 62707814 + 0.337231681760967 NA intron (NM_001077404, intron 1 of 16) intron (NM_001077404, intron 1 of 16) 4162 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_60_46_0.0925672176252386_5.60087246049026_0.337231681760967 chr1 138571763 138572497 + 0.337231681760967 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 47627 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-3 chr4 40947499 40948188 + 0.337231681760967 NA promoter-TSS (NM_029814) promoter-TSS (NM_029814) 451 NM_009736 12017 Mm.688 NM_009736 ENSMUSG00000028416 Bag1 BAG-1|Rap46 BCL2-associated athanogene 1 protein-coding common_peak2_55_50_-0.147781227752815_5.59853472809509_0.337231681760967-3 chr12 3235490 3236158 + 0.337231681760967 NA promoter-TSS (NR_015551) promoter-TSS (NR_015551) 33 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA common_peak1_60_46_0.0925672176252386_5.60087246049026_0.337231681760967-4 chr4 119293498 119294413 + 0.337231681760967 NA intron (NM_011732, intron 1 of 7) CpG-10232 558 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding common_peak2_127_111_-0.0984798165595402_6.75811501377783_0.337225858145287-4 chr7 92668885 92669876 + 0.337225858145287 NA intron (NM_029078, intron 1 of 15) intron (NM_029078, intron 1 of 15) 532 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding common_peak2_127_111_-0.0984798165595402_6.75811501377783_0.337225858145287-3 chr3 103058010 103059140 + 0.337225858145287 NA TTS (NM_144901) TTS (NM_144901) 290 NM_010937 18176 Mm.400954 NM_010937 ENSMUSG00000027852 Nras AV095280|N-ras neuroblastoma ras oncogene protein-coding common_peak1_128_111_-0.0873317691939608_6.76368903746062_0.337225858145287 chr1 93753779 93755606 + 0.337225858145287 NA promoter-TSS (NM_174874) promoter-TSS (NM_174874) 146 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak2_127_111_-0.0984798165595402_6.75811501377783_0.337225858145287 chr1 178405854 178406879 + 0.337225858145287 NA intron (NM_026626, intron 1 of 6) CpG 348 NM_026626 68226 Mm.252132 NM_026626 ENSMUSG00000026495 Efcab2 1700073K01Rik|D830011E08Rik EF-hand calcium binding domain 2 protein-coding common_peak2_127_111_-0.0984798165595402_6.75811501377783_0.337225858145287-2 chr3 22076775 22078026 + 0.337225858145287 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 748 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_135_105_0.0678004436267647_6.76182067637658_0.337225858145263 chr19 23687197 23688531 + 0.337225858145263 NA intron (NM_028208, intron 1 of 6) CpG 464 NM_028208 72351 Mm.474795 NM_028208 ENSMUSG00000074925 Ptar1 1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677 protein prenyltransferase alpha subunit repeat containing 1 protein-coding common_peak2_135_105_0.0678004436267647_6.76182067637658_0.337225858145263 chr3 88623088 88624446 + 0.337225858145263 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 2373 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_135_105_0.0678004436267647_6.76182067637658_0.337225858145263-2 chr8 70301801 70303248 + 0.337225858145263 NA promoter-TSS (NM_021538) promoter-TSS (NM_021538) -72 NM_001024922 234374 Mm.388127 NM_001024922 ENSMUSG00000057788 Ddx49 R27090_2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 protein-coding common_peak1_240_188_0.0530816018872171_7.58878322516468_0.337223820942026 chr1 178317751 178319446 + 0.337223820942026 NA promoter-TSS (NM_025511) promoter-TSS (NM_025511) -555 NM_025511 66359 Mm.489720 NM_025511 ENSMUSG00000026500 Cox20 2310005N03Rik|Fam36a COX20 Cox2 chaperone protein-coding common_peak1_175_151_-0.0828620699930127_7.20649647844708_0.337101905964871 chr6 87849349 87851036 + 0.337101905964871 NA intron (NM_001355195, intron 1 of 4) intron (NM_001355195, intron 1 of 4) 914 NM_001109745 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak1_241_189_0.0514001730721327_7.59555569486701_0.337036261240227 chr15 25395586 25398180 + 0.337036261240227 NA intron (NM_027395, intron 1 of 1) AT_rich|Low_complexity|Low_complexity 16881 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_94_73_0.0723120080968309_6.24560936967737_0.336988098307292 chr6 91646505 91647388 + 0.336988098307292 NA Intergenic Intergenic -37121 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_94_73_0.0723120080968309_6.24560936967737_0.336988098307292 chr6 48085921 48086527 + 0.336988098307292 NA intron (NM_001362062, intron 1 of 5) CpG 369 NM_001347142 69228 Mm.207555 NM_001163475 ENSMUSG00000057691 Zfp746 2810407L07Rik|AI317225|Znf746 zinc finger protein 746 protein-coding common_peak2_88_78_-0.115473521777176_6.24604398728852_0.336988098307292 chr1 58662755 58663390 + 0.336988098307292 NA intron (NM_001347056, intron 10 of 13) intron (NM_001347056, intron 10 of 13) 10431 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak2_88_78_-0.115473521777176_6.24604398728852_0.336988098307292-2 chr13 28917129 28918030 + 0.336988098307292 NA Intergenic Intergenic -32157 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak1_129_112_-0.0890938483526842_6.77563203823885_0.336893701733978-2 chr4 107177776 107179350 + 0.336893701733978 NA promoter-TSS (NM_025617) promoter-TSS (NM_025617) -67 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding common_peak1_129_112_-0.0890938483526842_6.77563203823885_0.336893701733978 chr1 106795665 106796832 + 0.336893701733978 NA intron (NM_009190, intron 1 of 10) CpG 477 NM_009190 20479 Mm.18705 NM_009190 ENSMUSG00000009907 Vps4b 8030489C12Rik|Skd1 vacuolar protein sorting 4B protein-coding common_peak2_185_145_0.0544056033269742_7.2170273605435_0.336858952331078 chr3 108910229 108911738 + 0.336858952331078 NA intron (NM_025845, intron 1 of 5) intron (NM_025845, intron 1 of 5) 746 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding common_peak2_177_152_-0.0761355958659689_7.21932004475967_0.336858952331078-2 chr8 69790765 69791956 + 0.336858952331078 NA exon (NM_133224, exon 1 of 26) exon (NM_133224, exon 1 of 26) 197 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding common_peak2_177_152_-0.0761355958659689_7.21932004475967_0.336858952331078 chr19 5365995 5367585 + 0.336858952331078 NA promoter-TSS (NR_104482) promoter-TSS (NR_104482) -23 NM_027236 69860 Mm.299167 NM_027236 ENSMUSG00000024841 Eif1ad 2010003J03Rik|AI131644 eukaryotic translation initiation factor 1A domain containing protein-coding common_peak1_177_152_-0.0761355958659689_7.21932004475967_0.336858952331078 chr19 46303975 46306072 + 0.336858952331078 NA promoter-TSS (NM_001177370) promoter-TSS (NM_001177370) 286 NM_001177369 18034 Mm.102365 NM_019408 ENSMUSG00000025225 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 protein-coding common_peak2_627_521_-0.0405986446919666_9.0076066742239_0.336694582640319 chr19 5809430 5813048 + 0.336694582640319 NA Intergenic Intergenic -8567 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA unique_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-2 chr11 98708123 98708685 + 0.336580821310529 NA intron (NM_001361995, intron 19 of 25) (TG)n|Simple_repeat|Simple_repeat 7091 NM_009971 12985 Mm.1238 NM_009971 ENSMUSG00000038067 Csf3 Csfg|G-CSF|MGI-IG colony stimulating factor 3 (granulocyte) protein-coding unique_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-2 chr8 22693581 22693988 + 0.336580821310529 NA intron (NM_001159774, intron 4 of 21) intron (NM_001159774, intron 4 of 21) 12799 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-6 chrX 141475566 141476075 + 0.336580821310529 NA intron (NM_007736, intron 2 of 51) intron (NM_007736, intron 2 of 51) 401 NM_001163155 12830 Mm.286892 NM_007736 ENSMUSG00000031274 Col4a5 - collagen, type IV, alpha 5 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-6 chr17 72968389 72968796 + 0.336580821310529 NA Intergenic Intergenic 50287 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-2 chr10 80153301 80153639 + 0.336580821310529 NA intron (NM_001347117, intron 4 of 7) intron (NM_001347117, intron 4 of 7) 3788 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529 chr1 72428884 72429116 + 0.336580821310529 NA exon (NM_001045533, exon 4 of 4) exon (NM_001045533, exon 4 of 4) 107564 NM_001045533 381270 Mm.337023 NM_001045533 ENSMUSG00000039372 March4 BC056494|mKIAA1399 membrane-associated ring finger (C3HC4) 4 protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-5 chr3 87616978 87617386 + 0.336580821310529 NA promoter-TSS (NM_001003912) promoter-TSS (NM_001003912) -377 NM_001360197 213498 Mm.287267 NM_001003912 ENSMUSG00000041977 Arhgef11 PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380 Rho guanine nucleotide exchange factor (GEF) 11 protein-coding unique_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-4 chr9 121285900 121286623 + 0.336580821310529 NA Intergenic Intergenic -9089 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-7 chr18 82489837 82490529 + 0.336580821310529 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 15060 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-8 chr6 34708126 34708446 + 0.336580821310529 NA intron (NM_001347100, intron 3 of 13) intron (NM_001347100, intron 3 of 13) -1158 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-8 chr7 105953230 105953738 + 0.336580821310529 NA intron (NM_001243039, intron 1 of 3) intron (NM_001243039, intron 1 of 3) 483 NM_001243040 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-13 chr5 142921224 142921599 + 0.336580821310529 NA Intergenic Intergenic -14657 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-8 chr19 60041624 60042043 + 0.336580821310529 NA Intergenic Intergenic -98179 NM_001164367 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-3 chr14 45464157 45464555 + 0.336580821310529 NA intron (NM_001360526, intron 12 of 15) intron (NM_001360526, intron 12 of 15) 65709 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-7 chr5 31566469 31567108 + 0.336580821310529 NA Intergenic Intergenic 4609 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-10 chr3 49686419 49686941 + 0.336580821310529 NA Intergenic Intergenic 70636 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-9 chr8 94788720 94789210 + 0.336580821310529 NA Intergenic MT2A|LTR|ERVL 16785 NM_009142 20312 Mm.103711 NM_009142 ENSMUSG00000031778 Cx3cl1 AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1 chemokine (C-X3-C motif) ligand 1 protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-2 chr13 98684324 98684938 + 0.336580821310529 NA Intergenic Intergenic 10200 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-3 chr2 90744899 90745246 + 0.336580821310529 NA promoter-TSS (NM_018828) promoter-TSS (NM_018828) -298 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-2 chr11 120624386 120624888 + 0.336580821310529 NA TTS (NR_105901) TTS (NR_105901) 239 NR_105901 102465565 NR_105901 ENSMUSG00000098282 Mir6936 Gm27574|mmu-mir-6936 microRNA 6936 ncRNA common_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529 chr11 6547166 6547357 + 0.336580821310529 NA intron (NM_001190343, intron 1 of 8) intron (NM_001190343, intron 1 of 8) 374 NM_001190343 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-6 chr2 73213950 73214355 + 0.336580821310529 NA intron (NM_030091, intron 1 of 7) CpG 295 NM_030091 67059 Mm.22661 NM_025942 ENSMUSG00000027108 Ola1 2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004 Obg-like ATPase 1 protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-10 chr9 111586925 111587496 + 0.336580821310529 NA intron (NM_016853, intron 8 of 10) intron (NM_016853, intron 8 of 10) 103138 NM_016853 20840 Mm.1414 NM_016853 ENSMUSG00000032502 Stac - src homology three (SH3) and cysteine rich domain protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-15 chr7 80789472 80789840 + 0.336580821310529 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 13675 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-2 chr16 45877944 45878533 + 0.336580821310529 NA Intergenic Intergenic -33487 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-3 chr9 41475831 41476368 + 0.336580821310529 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 1206 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-3 chr14 101795140 101795711 + 0.336580821310529 NA intron (NM_201529, intron 2 of 30) intron (NM_201529, intron 2 of 30) -45198 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-9 chr8 36095649 36095950 + 0.336580821310529 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 971 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-5 chr2 38536063 38536457 + 0.336580821310529 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 24384 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529 chr10 82354267 82354543 + 0.336580821310529 NA Intergenic CpG -113130 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-14 chr6 83572006 83572430 + 0.336580821310529 NA 5' UTR (NM_001362078, exon 1 of 10) 5' UTR (NM_001362078, exon 1 of 10) 286 NM_001362078 70527 Mm.32801 NM_024239 ENSMUSG00000006906 Stambp 5330424L14Rik|5730422L11Rik|AW107289|Amsh|mKIAA4198 STAM binding protein protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-4 chr2 180229898 180230396 + 0.336580821310529 NA Intergenic Intergenic -4288 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-4 chr2 32845923 32846375 + 0.336580821310529 NA intron (NM_001113569, intron 1 of 19) intron (NM_001113569, intron 1 of 19) 1083 NM_009295 20910 Mm.278865 NM_009295 ENSMUSG00000026797 Stxbp1 AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1 syntaxin binding protein 1 protein-coding common_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-5 chr9 107905831 107906270 + 0.336580821310529 NA promoter-TSS (NM_009074) promoter-TSS (NM_009074) -839 NR_109782 19882 Mm.3901 NM_009074 ENSMUSG00000032584 Mst1r CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK macrophage stimulating 1 receptor (c-met-related tyrosine kinase) protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-11 chr3 145702369 145702599 + 0.336580821310529 NA Intergenic Intergenic -52499 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-4 chr15 83157633 83158044 + 0.336580821310529 NA intron (NM_029787, intron 8 of 8) RMER15|LTR|ERVL 8193 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-3 chr19 46529954 46530340 + 0.336580821310529 NA TTS (NM_019718) TTS (NM_019718) 28499 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-4 chr4 89507325 89507661 + 0.336580821310529 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -180705 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529 chr11 103381821 103382068 + 0.336580821310529 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18252 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-12 chr4 59035208 59035713 + 0.336580821310529 NA intron (NM_025277, intron 1 of 2) CpG 304 NM_025277 14700 Mm.41780 NM_025277 ENSMUSG00000038607 Gng10 AV006524 guanine nucleotide binding protein (G protein), gamma 10 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-5 chr16 18498310 18498699 + 0.336580821310529 NA promoter-TSS (NM_023120) promoter-TSS (NM_023120) -209 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-7 chr3 84319117 84319351 + 0.336580821310529 NA Intergenic Intergenic -14459 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak1_31_29_-0.183905530963967_4.81493783012654_0.336580821310529 chr11 53793997 53794407 + 0.336580821310529 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 23729 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_31_29_-0.183905530963967_4.81493783012654_0.336580821310529-9 chr2 13270691 13271305 + 0.336580821310529 NA exon (NM_009105, exon 2 of 9) exon (NM_009105, exon 2 of 9) 417 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak1_30_29_-0.229386076482492_4.79219755736727_0.336580821310529-6 chr4 150854109 150854743 + 0.336580821310529 NA promoter-TSS (NM_133753) promoter-TSS (NM_133753) 523 NR_040649 73348 Mm.396218 NR_040649 ENSMUSG00000078492 1700045H11Rik - RIKEN cDNA 1700045H11 gene ncRNA common_peak2_30_29_-0.229386076482492_4.79219755736727_0.336580821310529 chr1 91063798 91064327 + 0.336580821310529 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 10618 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-8 chr17 57247278 57247615 + 0.336580821310522 NA promoter-TSS (NM_001308074) promoter-TSS (NM_001308074) 24 NM_001308074 78308 Mm.28468 NM_030084 ENSMUSG00000005823 Gpr108 1810015L19Rik|AA589464|C79132|Lustr2 G protein-coupled receptor 108 protein-coding unique_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522 chr8 119723949 119724629 + 0.336580821310522 NA intron (NM_026922, intron 3 of 26) intron (NM_026922, intron 3 of 26) 24280 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-3 chr12 84969474 84969869 + 0.336580821310522 NA intron (NM_178065, intron 1 of 19) intron (NM_178065, intron 1 of 19) 1215 NM_178065 68497 Mm.24446 NM_178065 ENSMUSG00000042350 Arel1 1110018G07Rik|AI649076|AW610792|Kiaa0317|mKIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-3 chr11 44944941 44945280 + 0.336580821310522 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 171818 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-5 chr13 63046268 63046651 + 0.336580821310522 NA intron (NM_001289926, intron 3 of 15) intron (NM_001289926, intron 3 of 15) 81566 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-6 chr18 36744767 36745031 + 0.336580821310522 NA promoter-TSS (NM_010885) promoter-TSS (NM_010885) 243 NM_011879 24010 Mm.30234 NM_011879 ENSMUSG00000024474 Ik MuRED IK cytokine protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-4 chr13 74208849 74209093 + 0.336580821310522 NA promoter-TSS (NM_177333) promoter-TSS (NM_177333) -271 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-12 chr7 45062479 45062854 + 0.336580821310522 NA intron (NM_001163684, intron 1 of 8) intron (NM_001163684, intron 1 of 8) 237 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-10 chrX 74249300 74249760 + 0.336580821310522 NA Intergenic Intergenic -2996 NM_001290421 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-4 chr12 86857097 86857546 + 0.336580821310522 NA Intergenic Intergenic 27493 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-5 chr14 7852248 7852616 + 0.336580821310522 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 34475 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-11 chr5 105779755 105780019 + 0.336580821310522 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 79077 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-2 chr9 71625562 71626016 + 0.336580821310522 NA TTS (NM_026599) TTS (NM_026599) -33429 NM_001033208 102371 Mm.27585 NM_001033208 ENSMUSG00000041361 Myzap AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap myocardial zonula adherens protein protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-2 chr10 71284775 71285131 + 0.336580821310522 NA intron (NM_145420, intron 1 of 6) CpG 309 NM_145420 216080 Mm.270530 NM_145420 ENSMUSG00000019927 Ube2d1 UBCH5 ubiquitin-conjugating enzyme E2D 1 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522 chr1 79776153 79776466 + 0.336580821310522 NA exon (NM_001081210, exon 1 of 4) exon (NM_001081210, exon 1 of 4) 291 NM_001081210 69163 Mm.238455 NM_001081210 ENSMUSG00000026248 Mrpl44 1810030E18Rik|5730593H20Rik|AI463302 mitochondrial ribosomal protein L44 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-9 chr4 42949906 42950208 + 0.336580821310522 NA promoter-TSS (NM_001355440) promoter-TSS (NM_001355440) 190 NM_001355439 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-8 chr8 110965222 110965568 + 0.336580821310522 NA intron (NM_009179, intron 3 of 6) intron (NM_009179, intron 3 of 6) 32428 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522 chr10 58382724 58383267 + 0.336580821310522 NA intron (NM_201242, intron 1 of 9) intron (NM_201242, intron 1 of 9) -11378 NM_001193303 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-7 chr4 156110055 156110503 + 0.336580821310522 NA intron (NM_177205, intron 1 of 9) CpG 281 NM_177205 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-9 chr8 119422479 119422858 + 0.336580821310522 NA Intergenic Intergenic -14494 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-7 chr15 77903523 77904072 + 0.336580821310522 NA Intergenic ID_B1|SINE|B4 25197 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-6 chr15 62118449 62118840 + 0.336580821310522 NA intron (NR_132746, intron 2 of 6) intron (NR_132746, intron 2 of 6) 79387 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-2 chr11 35920233 35920798 + 0.336580821310522 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 59574 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_34_26_0.0964684903823354_4.80312174735464_0.336580821310522-10 chr5 93262193 93262723 + 0.336580821310522 NA Intergenic Intergenic -5115 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_130_113_-0.0908277057223508_6.78747616130357_0.336567586798303 chr13 95324667 95326375 + 0.336567586798303 NA intron (NM_028106, intron 1 of 1) CpG 696 NM_028106 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding common_peak2_89_79_-0.117614927034023_6.26312063137035_0.336517889197633-2 chr15 66895999 66896968 + 0.336517889197633 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 5090 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_89_79_-0.117614927034023_6.26312063137035_0.336517889197633 chr7 129591648 129592588 + 0.336517889197633 NA intron (NM_172255, intron 1 of 28) CpG 255 NM_172255 207425 Mm.229323 NM_172255 ENSMUSG00000042055 Wdr11 2900055P10Rik|AW489876|Brwd2|mKIAA1351 WD repeat domain 11 protein-coding common_peak2_95_74_0.0679469968028821_6.26279218889732_0.336517889197633 chr11 59344190 59344939 + 0.336517889197633 NA Intergenic Intergenic 31089 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_95_74_0.0679469968028821_6.26279218889732_0.336517889197633-2 chr2 163357926 163358816 + 0.336517889197633 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 39602 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_89_79_-0.117614927034023_6.26312063137035_0.336517889197633 chr13 104816795 104817397 + 0.336517889197633 NA promoter-TSS (NM_026072) promoter-TSS (NM_026072) -74 NM_026075 67288 Mm.125465 NM_026075 ENSMUSG00000021716 Srek1ip1 3110031B13Rik|AI462702|AV348305|AW121048|Sfrs12ip1|Srsf12ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 protein-coding common_peak1_96_74_0.0827918639151974_6.27021462245348_0.336517889197633 chr7 4500877 4502227 + 0.336517889197633 NA exon (NM_029834, exon 1 of 22) exon (NM_029834, exon 1 of 22) 128 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding common_peak1_95_74_0.0679469968028821_6.26279218889732_0.336517889197633 chr2 29619862 29621242 + 0.336517889197633 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 832 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_56_51_-0.15044066136849_5.62521938745685_0.336492456843107-2 chr15 102349984 102350651 + 0.336492456843107 NA promoter-TSS (NR_155425) promoter-TSS (NR_155425) 442 NM_153416 223921 Mm.352946 NM_153416 ENSMUSG00000036678 Aaas AAA|ADRACALA|D030041N15Rik|GL003 achalasia, adrenocortical insufficiency, alacrimia protein-coding common_peak1_56_51_-0.15044066136849_5.62521938745685_0.336492456843107-5 chr8 25976119 25976559 + 0.336492456843107 NA intron (NM_029884, intron 1 of 17) intron (NM_029884, intron 1 of 17) 405 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak1_61_47_0.0854870388316256_5.62770602013697_0.336492456843107-2 chr11 99658404 99659030 + 0.336492456843107 NA exon (NM_001126320, exon 1 of 1) exon (NM_001126320, exon 1 of 1) 242 NM_001126320 100040248 Mm.340791 NM_001126320 ENSMUSG00000069718 Gm11563 2310045F10Rik predicted gene 11563 protein-coding common_peak2_56_51_-0.15044066136849_5.62521938745685_0.336492456843107 chr2 68911111 68911867 + 0.336492456843107 NA intron (NM_001347161, intron 1 of 10) intron (NM_001347161, intron 1 of 10) 50048 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_61_47_0.0854870388316256_5.62770602013697_0.336492456843107 chr13 98691212 98691995 + 0.336492456843107 NA intron (NM_001025606, intron 2 of 3) intron (NM_001025606, intron 2 of 3) 3228 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_56_51_-0.15044066136849_5.62521938745685_0.336492456843107-3 chr3 144680112 144680919 + 0.336492456843107 NA Intergenic Intergenic 39820 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_56_51_-0.15044066136849_5.62521938745685_0.336492456843107 chr11 115403587 115404426 + 0.336492456843107 NA non-coding (NR_154991, exon 1 of 5) intron (NM_026729, intron 1 of 5) 254 NR_154991 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding common_peak1_61_47_0.0854870388316256_5.62770602013697_0.336492456843107-4 chr4 12089409 12090009 + 0.336492456843107 NA 5' UTR (NM_001356563, exon 2 of 4) 5' UTR (NM_001356563, exon 2 of 4) 339 NM_198957 77604 Mm.474129 NM_198957 ENSMUSG00000052137 Rbm12b2 AV299215|C430048L16Rik|Rbm12bb RNA binding motif protein 12 B2 protein-coding common_peak2_61_47_0.0854870388316256_5.62770602013697_0.336492456843107-2 chr15 75920853 75921879 + 0.336492456843107 NA intron (NM_025412, intron 1 of 5) CpG 194 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak1_61_47_0.0854870388316256_5.62770602013697_0.336492456843107-3 chr12 70712758 70713514 + 0.336492456843107 NA Intergenic Intergenic -112378 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_61_47_0.0854870388316256_5.62770602013697_0.336492456843107 chr10 24209601 24210218 + 0.336492456843107 NA Intergenic Intergenic -13608 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_56_51_-0.15044066136849_5.62521938745685_0.336492456843107-4 chr5 44225846 44226550 + 0.336492456843107 NA intron (NM_173764, intron 1 of 13) CpG 408 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding common_peak2_61_47_0.0854870388316256_5.62770602013697_0.336492456843107-4 chr8 71680642 71681574 + 0.336492456843107 NA intron (NM_001190830, intron 9 of 23) PB1D10|SINE|Alu 4725 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding common_peak2_61_47_0.0854870388316256_5.62770602013697_0.336492456843107-3 chr2 156312051 156312814 + 0.336492456843107 NA promoter-TSS (NM_001316755) promoter-TSS (NM_001316755) -41 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding common_peak2_179_154_-0.0788662169941423_7.23669129677717_0.336382733572689 chr9 14613450 14615707 + 0.336382733572689 NA intron (NM_001081395, intron 1 of 12) CpG 422 NM_001081395 75723 Mm.159552 NM_001081395 ENSMUSG00000013076 Amotl1 2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155 angiomotin-like 1 protein-coding common_peak1_131_114_-0.0925340256931051_6.79922303809782_0.336247349974549 chr12 78861822 78863173 + 0.336247349974549 NA promoter-TSS (NM_023721) promoter-TSS (NM_023721) 425 NM_026114 13665 Mm.196220 NM_026114 ENSMUSG00000021116 Eif2s1 0910001O23Rik|2410026C18Rik|35kDa|Eif2a|eIF2alpha eukaryotic translation initiation factor 2, subunit 1 alpha protein-coding common_peak2_138_108_0.0587927266061605_6.79758068808001_0.336247349974524 chr19 23687070 23688379 + 0.336247349974524 NA intron (NM_028208, intron 1 of 6) CpG 324 NM_028208 72351 Mm.474795 NM_028208 ENSMUSG00000074925 Ptar1 1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677 protein prenyltransferase alpha subunit repeat containing 1 protein-coding common_peak2_139_108_0.0690617086223897_6.80271517908812_0.336247349974524 chr11 8663654 8665195 + 0.336247349974524 NA intron (NM_001083587, intron 1 of 30) CpG 111 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_189_148_0.0555418736903768_7.24693945730735_0.336149340500742 chr11 77686600 77687839 + 0.336149340500742 NA intron (NM_001024205, intron 1 of 3) CpG 1080 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding common_peak1_91_80_-0.104051680661613_6.28782416255382_0.33605982091883 chr11 6199890 6200809 + 0.33605982091883 NA 5' UTR (NM_173748, exon 1 of 6) 5' UTR (NM_173748, exon 1 of 6) 102 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding common_peak2_97_75_0.0783756503492254_6.2871153386182_0.33605982091883-3 chr8 13105755 13106625 + 0.33605982091883 NA promoter-TSS (NM_178708) promoter-TSS (NM_178708) 469 NM_146207 99375 Mm.212861 NM_146207 ENSMUSG00000031446 Cul4a 2810470J21Rik|AW495282 cullin 4A protein-coding common_peak2_90_80_-0.119707758428626_6.27999612367031_0.33605982091883-3 chr2 92008139 92009080 + 0.33605982091883 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 15561 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak2_90_80_-0.119707758428626_6.27999612367031_0.33605982091883 chr10 81384385 81385218 + 0.33605982091883 NA intron (NM_133964, intron 1 of 4) intron (NM_133964, intron 1 of 4) 373 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak2_97_75_0.0783756503492254_6.2871153386182_0.33605982091883-2 chr19 41673335 41674308 + 0.33605982091883 NA intron (NM_015748, intron 4 of 36) intron (NM_015748, intron 4 of 36) 70035 NM_015748 20562 Mm.39155 NM_015748 ENSMUSG00000025020 Slit1 Slil1|mKIAA0813 slit guidance ligand 1 protein-coding common_peak2_97_75_0.0783756503492254_6.2871153386182_0.33605982091883 chr14 14012256 14013292 + 0.33605982091883 NA intron (NM_139227, intron 1 of 11) CpG 283 NM_139227 246103 Mm.133625 NM_139227 ENSMUSG00000021738 Atxn7 A430107N12Rik|AI627028|Sca7|ataxin-7 ataxin 7 protein-coding common_peak2_97_75_0.0783756503492254_6.2871153386182_0.33605982091883-4 chr8 120971956 120972787 + 0.33605982091883 NA Intergenic Intergenic 110739 NR_045471 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA common_peak2_90_80_-0.119707758428626_6.27999612367031_0.33605982091883-4 chr6 52239565 52240444 + 0.33605982091883 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 850 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding common_peak2_90_80_-0.119707758428626_6.27999612367031_0.33605982091883-2 chr17 87106186 87107181 + 0.33605982091883 NA promoter-TSS (NM_019654) promoter-TSS (NM_019654) -996 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_314_247_0.0447209274673508_7.97655677412055_0.335999906485827 chr3 152209718 152211723 + 0.335999906485827 NA promoter-TSS (NM_001356364) promoter-TSS (NM_001356364) 298 NM_001355374 51886 Mm.278922 NM_057172 ENSMUSG00000028034 Fubp1 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4 far upstream element (FUSE) binding protein 1 protein-coding common_peak1_249_195_0.0531359576444901_7.64127782293745_0.335950496674084 chr7 73616497 73618367 + 0.335950496674084 NA Intergenic Intergenic -59037 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_239_203_-0.0630577354920989_7.64089647422545_0.335950496674084 chr9 62342428 62345034 + 0.335950496674084 NA intron (NM_009672, intron 1 of 6) CpG 2388 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_132_115_-0.0942134705815389_6.8108742598368_0.335932833736598 chr4 123663817 123665439 + 0.335932833736598 NA intron (NM_001199137, intron 1 of 92) CpG -1253 NR_136925 102633214 Mm.399387 NR_136925 Gm12925 - predicted gene 12925 ncRNA common_peak2_132_115_-0.0942134705815389_6.8108742598368_0.335932833736598 chr5 148398767 148400113 + 0.335932833736598 NA intron (NM_007513, intron 1 of 12) CpG 464 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_133_115_-0.0834829570604283_6.81623951659736_0.335932833736598 chr2 127247926 127249183 + 0.335932833736598 NA promoter-TSS (NM_025296) promoter-TSS (NM_025296) 579 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding common_peak2_58_52_-0.128519369240519_5.66366076994294_0.335782825099843-5 chr19 46044720 46045271 + 0.335782825099843 NA 5' UTR (NM_001113408, exon 1 of 11) 5' UTR (NM_001113408, exon 1 of 11) 316 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_57_52_-0.153007433185932_5.65141673797023_0.335782825099843 chr13 110909667 110910570 + 0.335782825099843 NA Intergenic Intergenic -6272 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-4 chr2 32175334 32175842 + 0.335782825099843 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 24440 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_62_48_0.0786604541316258_5.65404007118102_0.335782825099843 chr13 15862347 15863214 + 0.335782825099843 NA intron (NR_155430, intron 3 of 3) intron (NR_155430, intron 3 of 3) 55537 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak1_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-4 chr9 67025289 67026224 + 0.335782825099843 NA intron (NM_001164256, intron 7 of 7) intron (NM_001164256, intron 7 of 7) 18115 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-3 chr8 56931863 56932644 + 0.335782825099843 NA Intergenic Intergenic 381119 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak2_58_52_-0.128519369240519_5.66366076994294_0.335782825099843-2 chr11 58938259 58938739 + 0.335782825099843 NA exon (NM_022423, exon 1 of 4) exon (NM_022423, exon 1 of 4) 407 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-8 chr9 110684388 110685017 + 0.335782825099843 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 28199 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_58_52_-0.128519369240519_5.66366076994294_0.335782825099843-3 chr11 115707677 115708580 + 0.335782825099843 NA intron (NM_008163, intron 1 of 5) CpG 469 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-3 chr17 66366015 66366854 + 0.335782825099843 NA exon (NM_001114098, exon 8 of 15) exon (NM_001114098, exon 8 of 15) 83316 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-6 chr6 91201463 91202024 + 0.335782825099843 NA Intergenic Intergenic -11021 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_57_52_-0.153007433185932_5.65141673797023_0.335782825099843 chr11 71003636 71004331 + 0.335782825099843 NA intron (NM_178367, intron 1 of 11) CpG 449 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding common_peak2_57_52_-0.153007433185932_5.65141673797023_0.335782825099843-2 chr15 78406393 78406722 + 0.335782825099843 NA promoter-TSS (NM_001162493) promoter-TSS (NM_001162493) -155 NM_001162493 246221 Mm.294215 NM_138670 ENSMUSG00000071711 Mpst Mst mercaptopyruvate sulfurtransferase protein-coding common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843 chr11 49086578 49087271 + 0.335782825099843 NA promoter-TSS (NM_001271676) promoter-TSS (NM_001271676) -93 NM_001271676 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_58_52_-0.128519369240519_5.66366076994294_0.335782825099843-6 chr8 70648024 70648642 + 0.335782825099843 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 11405 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_58_52_-0.128519369240519_5.66366076994294_0.335782825099843 chr10 84622196 84622920 + 0.335782825099843 NA intron (NM_027423, intron 1 of 27) CpG 121 NM_027423 70428 Mm.335007 NM_027423 ENSMUSG00000034453 Polr3b 2700078H01Rik|A330032P03Rik|C85372|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-2 chr13 69533051 69533904 + 0.335782825099843 NA intron (NM_198600, intron 1 of 12) CpG 387 NM_198600 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak1_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-2 chr7 45922510 45923027 + 0.335782825099843 NA Intergenic Intergenic -1342 NM_010129 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak1_58_52_-0.128519369240519_5.66366076994294_0.335782825099843 chr11 96064744 96065301 + 0.335782825099843 NA exon (NM_172300, exon 1 of 7) exon (NM_172300, exon 1 of 7) 342 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-5 chr2 158113021 158113804 + 0.335782825099843 NA Intergenic Intergenic -21615 NR_040609 72340 Mm.443395 NR_040609 ENSMUSG00000100860 2010009K17Rik - RIKEN cDNA 2010009K17 gene ncRNA common_peak2_62_48_0.0786604541316258_5.65404007118102_0.335782825099843-7 chr8 34613787 34614514 + 0.335782825099843 NA intron (NR_040706, intron 2 of 4) intron (NR_040706, intron 2 of 4) 26166 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak2_58_52_-0.128519369240519_5.66366076994294_0.335782825099843-4 chr13 67637126 67638090 + 0.335782825099843 NA intron (NM_183146, intron 1 of 3) intron (NM_183146, intron 1 of 3) 145 NM_183146 212281 Mm.342918 NM_183146 ENSMUSG00000021510 Zfp729a A530054K11Rik|Rslcan3 zinc finger protein 729a protein-coding common_peak2_306_258_-0.0547423901718957_7.98943709260061_0.335723980652764 chr15 76079922 76081872 + 0.335723980652764 NA promoter-TSS (NM_133691) promoter-TSS (NM_133691) -27 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding common_peak1_134_116_-0.0852159495026106_6.8277567448321_0.335623886138388 chr13 110966627 110967980 + 0.335623886138388 NA Intergenic Intergenic -63457 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_134_116_-0.0852159495026106_6.8277567448321_0.335623886138388-2 chr7 123097171 123098939 + 0.335623886138388 NA Intergenic Intergenic -25830 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_98_76_0.0740600663570676_6.30381657387344_0.335613429170124 chr1 184075573 184076757 + 0.335613429170124 NA TTS (NM_022019) TTS (NM_022019) 41784 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_92_81_-0.106266862837847_6.30441857319916_0.335613429170124 chr1 87213284 87214303 + 0.335613429170124 NA promoter-TSS (NM_001347083) promoter-TSS (NM_001347083) -118 NM_001347083 26987 Mm.227183 NM_023314 ENSMUSG00000026254 Eif4e2 2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3 eukaryotic translation initiation factor 4E member 2 protein-coding common_peak1_98_76_0.0740600663570676_6.30381657387344_0.335613429170124-2 chr12 110737988 110738901 + 0.335613429170124 NA intron (NM_001347428, intron 1 of 2) CpG 512 NM_001347428 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_92_81_-0.106266862837847_6.30441857319916_0.335613429170124-2 chr2 23067812 23068788 + 0.335613429170124 NA promoter-TSS (NM_028793) promoter-TSS (NM_028793) 99 NM_001355639 74159 Mm.181973 NM_028793 ENSMUSG00000026781 Acbd5 1300014E15Rik acyl-Coenzyme A binding domain containing 5 protein-coding common_peak1_92_81_-0.106266862837847_6.30441857319916_0.335613429170124-2 chr17 33954847 33955671 + 0.335613429170124 NA promoter-TSS (NM_001357330) promoter-TSS (NM_001357330) 382 NM_011296 20084 Mm.298745 NM_011296 ENSMUSG00000008668 Rps18 H-2Ke3|H2-Ke3|Ke-3|ke3 ribosomal protein S18 protein-coding common_peak2_92_81_-0.106266862837847_6.30441857319916_0.335613429170124 chr13 14063869 14064611 + 0.335613429170124 NA promoter-TSS (NM_001331176) promoter-TSS (NM_001331176) 456 NM_198122 94246 Mm.439784 NM_194262 ENSMUSG00000039219 Arid4b BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding common_peak1_193_151_0.0566280613942487_7.27624154414071_0.33546729362757 chr8 122546646 122548777 + 0.33546729362757 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 3618 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_193_151_0.0566280613942487_7.27624154414071_0.33546729362757 chr8 121631269 121632836 + 0.33546729362757 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 19881 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_184_158_-0.0763752746195241_7.27469531797459_0.33546729362757 chr5 115534673 115536309 + 0.33546729362757 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -23976 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-4 chr13 53376928 53377300 + 0.335332249061431 NA intron (NM_009269, intron 1 of 14) intron (NM_009269, intron 1 of 14) 247 NM_009269 268656 Mm.240336 NM_009269 ENSMUSG00000021468 Sptlc1 AW552086|C77762|E030036H05|Lcb1|SPT1 serine palmitoyltransferase, long chain base subunit 1 protein-coding common_peak2_35_27_0.0843563266151008_4.84953308536515_0.335332249061431 chr12 83631657 83631941 + 0.335332249061431 NA promoter-TSS (NM_027349) promoter-TSS (NM_027349) -435 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-7 chr16 45076446 45077028 + 0.335332249061431 NA Intergenic Intergenic -17274 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-8 chr2 167867072 167867379 + 0.335332249061431 NA Intergenic Intergenic -65102 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-2 chr11 77765261 77765903 + 0.335332249061431 NA Intergenic Intergenic -11653 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-10 chr9 4310045 4310480 + 0.335332249061431 NA promoter-TSS (NM_026276) promoter-TSS (NM_026276) 446 NM_026962 69149 Mm.25946 NM_026962 ENSMUSG00000025893 Kbtbd3 2200003A07Rik|Bklhd3 kelch repeat and BTB (POZ) domain containing 3 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431 chr10 85102842 85103128 + 0.335332249061431 NA promoter-TSS (NM_010214) promoter-TSS (NM_010214) 358 NM_001013028 103266 Mm.335025 NM_001013028 ENSMUSG00000060935 Tmem263 AI597468 transmembrane protein 263 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-6 chr15 83447468 83447891 + 0.335332249061431 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 201 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-5 chr13 71963170 71963518 + 0.335332249061431 NA exon (NM_010573, exon 1 of 4) exon (NM_010573, exon 1 of 4) 379 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak2_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-2 chr6 128400089 128400402 + 0.335332249061431 NA exon (NM_021717, exon 1 of 6) exon (NM_021717, exon 1 of 6) 479 NM_001162858 60345 Mm.269883 NM_021717 ENSMUSG00000001520 Nrip2 AW491344|NIX1 nuclear receptor interacting protein 2 protein-coding unique_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431 chr8 94985944 94986335 + 0.335332249061431 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 1740 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-9 chr3 152189633 152190218 + 0.335332249061431 NA intron (NM_001356364, intron 1 of 2) intron (NM_001356364, intron 1 of 2) 3920 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_35_27_0.0843563266151008_4.84953308536515_0.335332249061431-3 chr11 101170135 101170858 + 0.335332249061431 NA intron (NM_146030, intron 1 of 12) CpG 806 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-10 chr9 56552188 56552785 + 0.335332249061425 NA Intergenic Intergenic 83162 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-4 chr18 25168428 25168884 + 0.335332249061425 NA promoter-TSS (NM_001033532) promoter-TSS (NM_001033532) 221 NM_001142698 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-2 chr1 172133893 172134550 + 0.335332249061425 NA exon (NM_001159525, exon 6 of 6) exon (NM_001159525, exon 6 of 6) 7466 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425 chr1 51144910 51145690 + 0.335332249061425 NA intron (NM_019790, intron 7 of 9) intron (NM_019790, intron 7 of 9) -143826 NM_138741 20324 Mm.398690 NM_138741 ENSMUSG00000045954 Cavin2 Sdpr caveolae associated 2 protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-4 chr13 50958003 50958324 + 0.335332249061425 NA Intergenic Intergenic 142564 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-10 chr9 42471692 42472174 + 0.335332249061425 NA intron (NM_173038, intron 1 of 7) intron (NM_173038, intron 1 of 7) 325 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-7 chr4 148444472 148444788 + 0.335332249061425 NA 5' UTR (NM_027873, exon 1 of 2) 5' UTR (NM_027873, exon 1 of 2) 121 NM_027873 71707 Mm.292503 NM_027873 ENSMUSG00000047719 Ubiad1 1200002M06Rik|AI426463|AW320947|Tere1 UbiA prenyltransferase domain containing 1 protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-2 chr11 44948058 44948565 + 0.335332249061425 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 168617 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-5 chr16 37539233 37539660 + 0.335332249061425 NA promoter-TSS (NM_001042499) promoter-TSS (NM_001042499) 343 NM_028812 74197 Mm.287795 NM_028812 ENSMUSG00000022828 Gtf2e1 2610024P03Rik|56kDa|AI303800|FE|TFIIE-A general transcription factor II E, polypeptide 1 (alpha subunit) protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-11 chr9 63717298 63718101 + 0.335332249061425 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 40295 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-5 chr2 32535388 32535821 + 0.335332249061425 NA 5' UTR (NM_153560, exon 1 of 11) 5' UTR (NM_153560, exon 1 of 11) 245 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-8 chr6 117545000 117545348 + 0.335332249061425 NA Intergenic Intergenic 49939 NR_152214 100126203 Mm.217172 NR_152214 6820426E19Rik Gm43983 RIKEN cDNA 6820426E19 gene ncRNA common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-9 chr8 95806119 95806623 + 0.335332249061425 NA promoter-TSS (NR_015574) promoter-TSS (NR_015574) -459 NR_015574 319960 Mm.386996 NR_015574 ENSMUSG00000074136 4930513N10Rik - RIKEN cDNA 4930513N10 gene ncRNA common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-9 chr7 112200493 112200821 + 0.335332249061425 NA Intergenic (GAAAA)n|Simple_repeat|Simple_repeat -25179 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-8 chr4 107489285 107489939 + 0.335332249061425 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 54893 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-3 chr10 17549451 17549831 + 0.335332249061425 NA Intergenic Intergenic -173587 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-3 chr12 76765580 76765799 + 0.335332249061425 NA intron (NR_154884, intron 1 of 2) intron (NR_154884, intron 1 of 2) 151 NM_206534 211151 Mm.80970 NM_206534 ENSMUSG00000090258 Churc1 1700030P15Rik|My015|chch churchill domain containing 1 protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-6 chr18 65726089 65726464 + 0.335332249061425 NA intron (NM_177028, intron 6 of 14) intron (NM_177028, intron 6 of 14) 28008 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-7 chr2 165759194 165759554 + 0.335332249061425 NA intron (NM_001271962, intron 10 of 15) intron (NM_001271962, intron 10 of 15) 98799 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_32_30_-0.187130325989116_4.86063114739232_0.335332249061425 chr10 123075926 123076304 + 0.335332249061425 NA 5' UTR (NM_153395, exon 1 of 34) 5' UTR (NM_153395, exon 1 of 34) 390 NM_001163024 67074 Mm.169924 NM_153395 ENSMUSG00000034602 Mon2 2610528O22Rik|AW495628|Sf21|mKIAA1040 MON2 homolog, regulator of endosome to Golgi trafficking protein-coding common_peak2_32_30_-0.187130325989116_4.86063114739232_0.335332249061425-6 chr2 33465592 33466149 + 0.335332249061425 NA intron (NM_001355611, intron 1 of 2) intron (NM_001355611, intron 1 of 2) 2662 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak2_194_152_0.0545328735973065_7.28465427949131_0.335245794372928 chr6 148211085 148212748 + 0.335245794372928 NA promoter-TSS (NR_015615) promoter-TSS (NR_015615) -372 NR_015615 320737 Mm.137858 NR_015615 4732416N19Rik - RIKEN cDNA 4732416N19 gene ncRNA common_peak1_93_82_-0.108433107618114_6.32082287753787_0.335178273031072-2 chr19 38032567 38033749 + 0.335178273031072 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 10419 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_93_82_-0.108433107618114_6.32082287753787_0.335178273031072 chr18 14988918 14990210 + 0.335178273031072 NA non-coding (NR_045372, exon 3 of 5) non-coding (NR_045372, exon 3 of 5) 569 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA common_peak2_93_82_-0.108433107618114_6.32082287753787_0.335178273031072-2 chr9 71320559 71321342 + 0.335178273031072 NA Intergenic Intergenic 105161 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak2_99_77_0.0698416637168151_6.32032305072066_0.335178273031072-2 chr4 107802409 107803687 + 0.335178273031072 NA intron (NM_001080926, intron 1 of 18) CpG 789 NM_001080926 16975 Mm.442134 NM_053073 ENSMUSG00000028613 Lrp8 4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding common_peak1_99_77_0.0698416637168151_6.32032305072066_0.335178273031072 chr11 96746842 96747654 + 0.335178273031072 NA intron (NM_001177898, intron 10 of 10) intron (NM_001177898, intron 10 of 10) 30307 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak2_99_77_0.0698416637168151_6.32032305072066_0.335178273031072 chr1 36068544 36069843 + 0.335178273031072 NA intron (NM_015818, intron 1 of 1) CpG 793 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak2_93_82_-0.108433107618114_6.32082287753787_0.335178273031072 chr14 70442746 70443984 + 0.335178273031072 NA promoter-TSS (NM_001164082) promoter-TSS (NM_001164082) 106 NM_025945 67065 Mm.20420 NM_025945 ENSMUSG00000000776 Polr3d 2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51 polymerase (RNA) III (DNA directed) polypeptide D protein-coding common_peak1_99_77_0.0698416637168151_6.32032305072066_0.335178273031072-2 chr6 100833768 100835037 + 0.335178273031072 NA intron (NM_182939, intron 1 of 8) intron (NM_182939, intron 1 of 8) 764 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_63_49_0.0720738952965831_5.67989313742302_0.33510104391349-3 chr15 64223571 64224277 + 0.33510104391349 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 88749 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_63_49_0.0720738952965831_5.67989313742302_0.33510104391349-2 chr2 155276438 155276985 + 0.33510104391349 NA intron (NR_046364, intron 1 of 2) CpG 347 NR_046364 66734 Mm.196239 NM_025735 ENSMUSG00000027602 Map1lc3a 1010001H21Rik|4922501H04Rik|LC3|LC3a microtubule-associated protein 1 light chain 3 alpha protein-coding common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349 chr10 116958199 116958842 + 0.33510104391349 NA intron (NR_038026, intron 2 of 2) intron (NR_038026, intron 2 of 2) -6220 NR_027847 103175 Mm.27138 NR_027846 ENSMUSG00000031294 D630029K05Rik AI314111|AI875589 RIKEN cDNA D630029K05 gene ncRNA common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-7 chr7 111121862 111122627 + 0.33510104391349 NA intron (NR_015573, intron 1 of 2) CpG 431 NR_015573 75479 Mm.381620 NR_015573 ENSMUSG00000110424 1700012D14Rik - RIKEN cDNA 1700012D14 gene ncRNA common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-4 chr16 33891357 33892121 + 0.33510104391349 NA intron (NM_001145884, intron 5 of 14) intron (NM_001145884, intron 5 of 14) 62074 NM_001145884 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding common_peak1_64_49_0.0942839038610233_5.69099814170524_0.33510104391349 chr10 116958187 116958851 + 0.33510104391349 NA intron (NR_038026, intron 2 of 2) intron (NR_038026, intron 2 of 2) -6221 NR_027847 103175 Mm.27138 NR_027846 ENSMUSG00000031294 D630029K05Rik AI314111|AI875589 RIKEN cDNA D630029K05 gene ncRNA common_peak1_63_49_0.0720738952965831_5.67989313742302_0.33510104391349 chr1 151338531 151339694 + 0.33510104391349 NA Intergenic Intergenic -5374 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_63_49_0.0720738952965831_5.67989313742302_0.33510104391349-4 chr17 72959959 72960829 + 0.33510104391349 NA Intergenic Intergenic 42089 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-2 chr11 61493615 61494105 + 0.33510104391349 NA exon (NM_001291034, exon 1 of 6) exon (NM_001291034, exon 1 of 6) 401 NM_001361989 23939 Mm.38172 NM_011841 ENSMUSG00000001034 Mapk7 BMK-1|BMK1|ERK-5|ERK5|Erk5-T|PRKM7|b2b2346Clo mitogen-activated protein kinase 7 protein-coding common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-6 chr7 56050242 56050928 + 0.33510104391349 NA intron (NM_001360080, intron 1 of 92) intron (NM_001360080, intron 1 of 92) 196 NM_001360080 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_63_49_0.0720738952965831_5.67989313742302_0.33510104391349 chr2 109677456 109678120 + 0.33510104391349 NA intron (NM_001285419, intron 1 of 1) intron (NM_001285419, intron 1 of 1) 756 NM_001285419 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-3 chr11 97427535 97428065 + 0.33510104391349 NA Intergenic Intergenic -22360 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_63_49_0.0720738952965831_5.67989313742302_0.33510104391349-2 chr1 151428665 151429303 + 0.33510104391349 NA promoter-TSS (NM_025819) promoter-TSS (NM_025819) 442 NM_001357570 98685 Mm.289373 NM_026876 ENSMUSG00000053286 Trmt1l 1190005F20Rik|AW226554|C1orf25|Trm1-like|Trm1l tRNA methyltransferase 1 like protein-coding common_peak2_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-5 chr17 17837306 17837904 + 0.33510104391349 NA intron (NM_001162909, intron 5 of 8) intron (NM_001162909, intron 5 of 8) 6630 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak1_64_49_0.0942839038610233_5.69099814170524_0.33510104391349-2 chr7 80402890 80403486 + 0.33510104391349 NA promoter-TSS (NM_011046) promoter-TSS (NM_011046) -376 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak2_59_53_-0.131409936537583_5.68918253389468_0.335101043913478 chr15 101077919 101078578 + 0.335101043913478 NA Intergenic CpG -23849 NM_001214911 668225 Mm.385011 NM_001214911 ENSMUSG00000095440 Fignl2 EG668225 fidgetin-like 2 protein-coding common_peak2_59_53_-0.131409936537583_5.68918253389468_0.335101043913478-2 chr8 91801061 91801597 + 0.335101043913478 NA 5' UTR (NM_008393, exon 1 of 4) 5' UTR (NM_008393, exon 1 of 4) 325 NM_001253822 16373 Mm.238044 NM_008393 ENSMUSG00000031734 Irx3 AI894186 Iroquois related homeobox 3 protein-coding common_peak1_136_118_-0.088602189192164_6.85051666871186_0.335022115516376 chr13 91223613 91225191 + 0.335022115516376 NA promoter-TSS (NM_025770) promoter-TSS (NM_025770) -415 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak2_144_112_0.0673359781427143_6.85384695148655_0.335022115516376 chr14 20929498 20930914 + 0.335022115516376 NA intron (NM_009502, intron 1 of 20) intron (NM_009502, intron 1 of 20) 808 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_197_154_0.0576672222044881_7.30495801637648_0.334811236037068 chr15 93397008 93398943 + 0.334811236037068 NA promoter-TSS (NM_175363) promoter-TSS (NM_175363) 359 NM_001347097 67197 Mm.293181 NM_026025 ENSMUSG00000022635 Zcrb1 2700088M22Rik|Madp-1 zinc finger CCHC-type and RNA binding motif 1 protein-coding common_peak2_94_83_-0.11055204905298_6.33704139825227_0.334753933508744-2 chr19 32304266 32304906 + 0.334753933508744 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 44730 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_101_78_0.0798307318135585_6.34369611408388_0.334753933508744 chr18 34932322 34933281 + 0.334753933508744 NA promoter-TSS (NM_144866) promoter-TSS (NM_144866) -798 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak2_94_83_-0.11055204905298_6.33704139825227_0.334753933508744 chr1 127774193 127774983 + 0.334753933508744 NA promoter-TSS (NR_045298) promoter-TSS (NR_045298) 424 NM_028399 72949 Mm.268672 NM_028399 ENSMUSG00000026349 Ccnt2 2900041I18Rik|C81304|CycT2|CycT2a|CycT2b cyclin T2 protein-coding common_peak2_137_119_-0.0902566711580537_6.86176226002949_0.334729014356514 chr6 85348095 85349342 + 0.334729014356514 NA exon (NM_177466, exon 2 of 5) exon (NM_177466, exon 2 of 5) -12345 NR_030486 735267 NR_030486 ENSMUSG00000076012 Mir705 Mirn705|mmu-mir-705 microRNA 705 ncRNA common_peak1_145_113_0.0644704418279414_6.86512523507871_0.334729014356514 chr19 55741917 55743053 + 0.334729014356514 NA exon (NM_001331147, exon 1 of 14) exon (NM_001331147, exon 1 of 14) 675 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak1_198_155_0.0556061334857034_7.3132052856051_0.334598070420234 chr11 62456716 62458800 + 0.334598070420234 NA promoter-TSS (NM_177229) promoter-TSS (NM_177229) -426 NM_177229 20185 Mm.271814 NM_011308 ENSMUSG00000018501 Ncor1 5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047 nuclear receptor co-repressor 1 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-21 chr8 76900263 76900513 + 0.334470287753051 NA non-coding (NR_028579, exon 1 of 2) non-coding (NR_028579, exon 1 of 2) 233 NR_028579 102640923 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 - predicted gene 10649 ncRNA unique_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-4 chr4 83918396 83918660 + 0.334470287753051 NA Intergenic Intergenic 126351 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-7 chr11 3331863 3332085 + 0.334470287753051 NA exon (NM_178149, exon 2 of 6) exon (NM_178149, exon 2 of 6) 1243 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-13 chr3 151331577 151331910 + 0.334470287753051 NA Intergenic Intergenic -106139 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-10 chr2 164805137 164805372 + 0.334470287753051 NA promoter-TSS (NM_133240) promoter-TSS (NM_133240) 140 NM_178375 67538 Mm.33184 NM_178375 ENSMUSG00000045822 Zswim3 4921517A06Rik|C86566 zinc finger SWIM-type containing 3 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-13 chr2 6549701 6549908 + 0.334470287753051 NA intron (NM_001310447, intron 10 of 11) intron (NM_001310447, intron 10 of 11) 171858 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-17 chr5 151333229 151333595 + 0.334470287753051 NA Intergenic Intergenic -35263 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-10 chr2 32621049 32621272 + 0.334470287753051 NA promoter-TSS (NM_001198790) promoter-TSS (NM_001198790) -598 NM_001198790 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-6 chr12 40116722 40117014 + 0.334470287753051 NA intron (NM_009132, intron 3 of 13) intron (NM_009132, intron 3 of 13) 17360 NM_009132 20259 Mm.2416 NM_009132 ENSMUSG00000002565 Scin AW545522|adseverin scinderin protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-7 chr18 24942017 24942254 + 0.334470287753051 NA intron (NM_001289654, intron 5 of 24) intron (NM_001289654, intron 5 of 24) 223830 NM_001142697 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-15 chrX 57392517 57392833 + 0.334470287753051 NA intron (NM_001166623, intron 1 of 8) CpG 361 NM_011252 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-12 chr17 27056984 27057206 + 0.334470287753051 NA promoter-TSS (NM_080553) promoter-TSS (NM_080553) -209 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-9 chr2 181525134 181525492 + 0.334470287753051 NA intron (NM_001271584, intron 2 of 5) B1_Mur3|SINE|Alu 4828 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-3 chr1 87214600 87214855 + 0.334470287753051 NA intron (NM_001039169, intron 1 of 6) intron (NM_001039169, intron 1 of 6) 788 NM_001039169 26987 Mm.227183 NM_023314 ENSMUSG00000026254 Eif4e2 2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3 eukaryotic translation initiation factor 4E member 2 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-23 chr9 14233615 14233845 + 0.334470287753051 NA Intergenic Intergenic -42571 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-12 chr19 18599062 18599390 + 0.334470287753051 NA intron (NM_017375, intron 2 of 9) intron (NM_017375, intron 2 of 9) 32587 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-11 chr17 8165038 8165289 + 0.334470287753051 NA promoter-TSS (NM_001197046) promoter-TSS (NM_001197046) -355 NM_001197046 75296 Mm.227250 NM_201230 ENSMUSG00000069135 Fgfr1op 4930553O10Rik|FOP Fgfr1 oncogene partner protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-17 chr5 96801837 96802112 + 0.334470287753051 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 8589 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-8 chr14 101870601 101870948 + 0.334470287753051 NA intron (NM_001347628, intron 1 of 26) intron (NM_001347628, intron 1 of 26) 30151 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051 chr1 16212876 16213174 + 0.334470287753051 NA Intergenic Intergenic 107143 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-15 chr3 53060987 53061221 + 0.334470287753051 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 19557 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-10 chr4 100248470 100248695 + 0.334470287753051 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 152791 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-2 chr1 132195772 132196000 + 0.334470287753051 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) -2202 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-7 chr13 31468456 31468660 + 0.334470287753051 NA Intergenic Intergenic -89612 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-24 chr8 122056542 122056746 + 0.334470287753051 NA Intergenic Intergenic 78620 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-9 chr5 140611738 140612036 + 0.334470287753051 NA exon (NM_008494, exon 2 of 8) exon (NM_008494, exon 2 of 8) 4546 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-2 chr1 74047145 74047443 + 0.334470287753051 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 77153 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-9 chr18 60608251 60608492 + 0.334470287753051 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 1733 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-16 chr5 140321251 140321477 + 0.334470287753051 NA promoter-TSS (NM_001356585) promoter-TSS (NM_001356585) 188 NM_001359025 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-22 chr8 33824680 33824989 + 0.334470287753051 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -77064 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-2 chr1 75546588 75546832 + 0.334470287753051 NA intron (NM_001357150, intron 1 of 22) CpG 248 NM_001357150 20536 Mm.5053 NM_009208 ENSMUSG00000006576 Slc4a3 A930038D23Rik|Ae3 solute carrier family 4 (anion exchanger), member 3 protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-11 chr17 26534065 26534322 + 0.334470287753051 NA Intergenic Intergenic -25721 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-8 chr16 43889271 43889468 + 0.334470287753051 NA promoter-TSS (NM_027801) promoter-TSS (NM_027801) 307 NM_029128 106248 Mm.275354 NM_029128 ENSMUSG00000022704 Qtrt2 3110012M05Rik|4930470H18Rik|AI648807|Qrtr2|Qtrtd1 queuine tRNA-ribosyltransferase accessory subunit 2 protein-coding unique_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051 chr1 88875687 88875931 + 0.334470287753051 NA Intergenic Intergenic 120919 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-3 chr1 106629038 106629284 + 0.334470287753051 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -82530 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-8 chr12 84176105 84176324 + 0.334470287753051 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 17801 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-12 chr19 44740411 44740657 + 0.334470287753051 NA Intergenic Intergenic -16860 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-17 chr5 114649808 114650076 + 0.334470287753051 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 8479 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-2 chr13 63249937 63250279 + 0.334470287753051 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 10079 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-19 chr7 84412885 84413162 + 0.334470287753051 NA Intergenic Intergenic -2985 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-22 chr8 121636660 121636878 + 0.334470287753051 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 15164 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-16 chr3 96221132 96221398 + 0.334470287753051 NA promoter-TSS (NM_175662) promoter-TSS (NM_175662) 193 NM_178214 319190 Mm.439791 NM_178214 ENSMUSG00000068854 Hist2h2be AV127319|H2b-613|T25626 histone cluster 2, H2be protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-11 chr17 45796411 45796638 + 0.334470287753051 NA Intergenic Intergenic 62018 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-6 chr8 47760589 47760832 + 0.334470287753051 NA Intergenic Intergenic -46779 NM_172407 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-21 chr8 39010970 39011179 + 0.334470287753051 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 5229 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-17 chr9 44903626 44903909 + 0.334470287753051 NA Intergenic Intergenic 16975 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-10 chr17 23739975 23740270 + 0.334470287753051 NA 5' UTR (NM_023824, exon 1 of 3) 5' UTR (NM_023824, exon 1 of 3) 208 NM_023824 76498 Mm.491253 NM_023824 ENSMUSG00000023909 Paqr4 1500004C10Rik progestin and adipoQ receptor family member IV protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-6 chr10 24364942 24365206 + 0.334470287753051 NA Intergenic Intergenic 141557 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-2 chr13 36116882 36117100 + 0.334470287753051 NA promoter-TSS (NM_024274) promoter-TSS (NM_024274) 366 NM_201358 380840 Mm.390576 NM_201358 ENSMUSG00000046573 Lyrm4 BC034664|Gm903 LYR motif containing 4 protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-8 chr17 6167519 6167756 + 0.334470287753051 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 29489 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-12 chr5 137099214 137099435 + 0.334470287753051 NA Intergenic Intergenic 16883 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051 chr1 54844775 54844962 + 0.334470287753051 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 81519 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-5 chr11 120548819 120549079 + 0.334470287753051 NA intron (NM_001033231, intron 1 of 4) intron (NM_001033231, intron 1 of 4) 778 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Mcrip1 Fam195b MAPK regulated corepressor interacting protein 1 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-18 chr6 112777143 112777472 + 0.334470287753051 NA intron (NM_080448, intron 5 of 21) intron (NM_080448, intron 5 of 21) -80637 NM_001167730 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-3 chr12 80227803 80228014 + 0.334470287753051 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 32463 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-3 chr10 109904269 109904543 + 0.334470287753051 NA intron (NM_001081035, intron 1 of 38) intron (NM_001081035, intron 1 of 38) 95813 NM_001081035 260315 Mm.225050 NM_177797 ENSMUSG00000020181 Nav3 4732483H20Rik|9630020C08Rik|POMFIL1|Pomfil1p|mKIAA0938|unc53H3 neuron navigator 3 protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-8 chr5 93105928 93106257 + 0.334470287753051 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 12676 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-14 chr3 96238340 96238541 + 0.334470287753051 NA TTS (NM_178216) TTS (NM_178216) 687 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-17 chr5 21186160 21186442 + 0.334470287753051 NA promoter-TSS (NM_175437) promoter-TSS (NM_175437) 34 NM_001359877 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-15 chr6 29211961 29212203 + 0.334470287753051 NA exon (NM_011829, exon 1 of 14) exon (NM_011829, exon 1 of 14) 215 NM_011829 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine monophosphate dehydrogenase 1 protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-17 chr6 15727961 15728233 + 0.334470287753051 NA intron (NM_175088, intron 2 of 4) (GGA)n|Simple_repeat|Simple_repeat 7436 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-3 chr15 10760316 10760559 + 0.334470287753051 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 45537 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-6 chr9 103010631 103010965 + 0.334470287753051 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 2309 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-23 chrX 96101269 96101485 + 0.334470287753051 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 5332 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-10 chr18 54906248 54906435 + 0.334470287753051 NA intron (NM_001360787, intron 2 of 8) intron (NM_001360787, intron 2 of 8) 83839 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-4 chr11 87748361 87748702 + 0.334470287753051 NA Intergenic Intergenic -8333 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051 chr1 90204139 90204420 + 0.334470287753051 NA intron (NM_007722, intron 1 of 1) intron (NM_007722, intron 1 of 1) 299 NM_007722 12778 Mm.6522 NM_007722 ENSMUSG00000044337 Ackr3 AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1 atypical chemokine receptor 3 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-11 chr2 60641349 60641567 + 0.334470287753051 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 32235 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-12 chr7 29458282 29458484 + 0.334470287753051 NA intron (NM_001081028, intron 2 of 22) intron (NM_001081028, intron 2 of 22) 47077 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-9 chr2 27330127 27330416 + 0.334470287753051 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -82968 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-4 chr10 42503051 42503307 + 0.334470287753051 NA intron (NM_017472, intron 1 of 3) intron (NM_017472, intron 1 of 3) 1125 NM_017472 54198 Mm.277870 NM_017472 ENSMUSG00000019804 Snx3 SDP3 sorting nexin 3 protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-7 chr2 152351059 152351278 + 0.334470287753051 NA intron (NR_033505, intron 1 of 4) intron (NR_033505, intron 1 of 4) 5499 NR_033505 791417 Mm.451219 NR_033505 ENSMUSG00000068062 Gm14164 - predicted gene 14164 ncRNA common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-7 chr13 69585502 69585718 + 0.334470287753051 NA intron (NM_175283, intron 4 of 4) intron (NM_175283, intron 4 of 4) 25853 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-10 chr16 26444636 26444859 + 0.334470287753051 NA Intergenic Intergenic -18388 NM_053241 114141 Mm.275205 NM_053241 ENSMUSG00000038148 Cldn16 PCLN1|claudin-16 claudin 16 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-25 chr9 65579753 65579944 + 0.334470287753051 NA intron (NM_153119, intron 1 of 5) intron (NM_153119, intron 1 of 5) 239 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051 chr11 88252536 88252759 + 0.334470287753051 NA Intergenic Intergenic -41396 NM_028859 74297 Mm.207320 NM_028859 ENSMUSG00000034031 Ccdc182 1700106J16Rik coiled-coil domain containing 182 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-2 chr1 135410748 135411038 + 0.334470287753051 NA intron (NM_001357578, intron 5 of 24) PB1|SINE|Alu 19598 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9 importin 9 protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051 chr10 84916814 84917034 + 0.334470287753051 NA promoter-TSS (NM_183172) promoter-TSS (NM_183172) -689 NM_001013441 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-14 chr2 150362384 150362603 + 0.334470287753051 NA intron (NM_027017, intron 1 of 3) intron (NM_027017, intron 1 of 3) 272 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-13 chr3 63904581 63904817 + 0.334470287753051 NA Intergenic Intergenic 24099 NM_001357824 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-6 chr13 23749180 23749406 + 0.334470287753051 NA Intergenic Intergenic -1795 NM_175660 319172 Mm.423402 NM_175660 ENSMUSG00000061615 Hist1h2ab H2A.1|H2a-53 histone cluster 1, H2ab protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-16 chr8 126854325 126854602 + 0.334470287753051 NA Intergenic Intergenic 5443 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-13 chr2 148476898 148477136 + 0.334470287753051 NA Intergenic Intergenic -33482 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051 chr1 131111986 131112452 + 0.334470287753051 NA Intergenic B1F|SINE|Alu -14376 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-11 chr3 102478303 102478525 + 0.334470287753051 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 8495 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-12 chr17 26597906 26598231 + 0.334470287753051 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 36556 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-5 chr8 72421854 72422046 + 0.334470287753051 NA promoter-TSS (NM_001289859) promoter-TSS (NM_001289859) -476 NM_001289859 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-3 chr10 84395543 84395749 + 0.334470287753051 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 44825 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-4 chr13 63239518 63239720 + 0.334470287753051 NA promoter-TSS (NR_110521) promoter-TSS (NR_110521) -410 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-5 chr12 25860430 25860821 + 0.334470287753051 NA Intergenic Intergenic 349880 NR_131149 629481 Mm.390460 NR_131149 ENSMUSG00000113550 Gm29687 - predicted gene, 29687 ncRNA common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-13 chr19 42085923 42086123 + 0.334470287753051 NA intron (NM_198108, intron 1 of 4) intron (NM_198108, intron 1 of 4) 347 NM_198108 226123 Mm.259441 NM_198108 ENSMUSG00000049670 Morn4 - MORN repeat containing 4 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-22 chr8 120062668 120062896 + 0.334470287753051 NA Intergenic Intergenic 38690 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-21 chr8 13516972 13517241 + 0.334470287753051 NA Intergenic Intergenic -22571 NM_019521 14456 Mm.3982 NM_019521 ENSMUSG00000031451 Gas6 Gas-6 growth arrest specific 6 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-14 chr9 102950728 102950956 + 0.334470287753051 NA Intergenic Intergenic -57647 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-15 chr4 137862408 137862608 + 0.334470287753051 NA intron (NM_199307, intron 1 of 19) CpG 271 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-18 chr5 130265071 130265343 + 0.334470287753051 NA intron (NR_153350, intron 3 of 15) intron (NR_153350, intron 3 of 15) 8170 NM_001015876 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-14 chr6 13838817 13839042 + 0.334470287753051 NA 5' UTR (NM_001330666, exon 2 of 4) 5' UTR (NM_001330666, exon 2 of 4) 1013 NM_001330666 64450 Mm.167625 NM_145066 ENSMUSG00000048216 Gpr85 2900026B03Rik G protein-coupled receptor 85 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-19 chr7 139280312 139280621 + 0.334470287753051 NA Intergenic Intergenic 31984 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-6 chr11 119228150 119228428 + 0.334470287753051 NA promoter-TSS (NM_175430) promoter-TSS (NM_175430) 210 NM_001347625 207592 Mm.205263 NM_172443 ENSMUSG00000039976 Tbc1d16 B930087K01|BC026530|Tcd1d16 TBC1 domain family, member 16 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-23 chr9 69445251 69445682 + 0.334470287753051 NA Intergenic Intergenic -8217 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-3 chr11 20200782 20201025 + 0.334470287753051 NA promoter-TSS (NM_008996) promoter-TSS (NM_008996) -509 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-8 chr2 6164199 6164519 + 0.334470287753051 NA Intergenic Intergenic -28892 NR_040333 320132 Mm.445891 NR_040333 ENSMUSG00000087125 A230108P19Rik - RIKEN cDNA A230108P19 gene ncRNA unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-7 chr13 72074943 72075203 + 0.334470287753051 NA Intergenic Intergenic -111350 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-2 chr1 36558013 36558208 + 0.334470287753051 NA promoter-TSS (NM_001304330) promoter-TSS (NM_001304330) 271 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-7 chr16 20548678 20548948 + 0.334470287753051 NA promoter-TSS (NR_030670) promoter-TSS (NR_030670) 210 NM_013852 27406 Mm.27135 NM_013852 ENSMUSG00000003234 Abcf3 AI326318|AU016058|BB119416 ATP-binding cassette, sub-family F (GCN20), member 3 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-20 chr8 10964450 10964692 + 0.334470287753051 NA Intergenic Intergenic -36114 NR_135302 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-13 chr18 80548907 80549193 + 0.334470287753051 NA Intergenic Intergenic -4504 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-24 chr9 41491208 41491537 + 0.334470287753051 NA intron (NR_131930, intron 2 of 3) intron (NR_131930, intron 2 of 3) 16479 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-6 chr12 53588033 53588352 + 0.334470287753051 NA intron (NM_013780, intron 3 of 11) intron (NM_013780, intron 3 of 11) 339515 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-4 chr11 52333982 52334234 + 0.334470287753051 NA Intergenic Intergenic -26754 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding unique_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-2 chr10 120477645 120477903 + 0.334470287753051 NA Intergenic Intergenic -1305 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-2 chr10 25790820 25791021 + 0.334470287753051 NA intron (NR_045349, intron 2 of 4) intron (NR_045349, intron 2 of 4) 46517 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-19 chr7 35754095 35754320 + 0.334470287753051 NA intron (NM_178704, intron 1 of 18) CpG 247 NM_178704 233115 Mm.257808 NM_178704 ENSMUSG00000043671 Dpy19l3 6030410G08|9330164H19Rik dpy-19-like 3 (C. elegans) protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-6 chr16 11134918 11135216 + 0.334470287753051 NA promoter-TSS (NM_029582) promoter-TSS (NM_029582) -535 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-17 chr8 94262328 94262564 + 0.334470287753051 NA intron (NM_172410, intron 4 of 22) intron (NM_172410, intron 4 of 22) -4401 NM_001357267 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051 chr1 7398312 7398608 + 0.334470287753051 NA Intergenic CpG 309540 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-16 chr4 89446275 89446472 + 0.334470287753051 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -135341 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-9 chr16 10451771 10452111 + 0.334470287753051 NA Intergenic Intergenic -4579 NM_001013778 383103 Mm.325732 NM_001013778 ENSMUSG00000050908 Tvp23a Fam18a trans-golgi network vesicle protein 23A protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-5 chr17 31788817 31789108 + 0.334470287753051 NA Intergenic Intergenic 66842 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-4 chr10 68281498 68281700 + 0.334470287753051 NA Intergenic Intergenic -2873 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-20 chr7 66177242 66177464 + 0.334470287753051 NA Intergenic Intergenic 67838 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-10 chr7 70144489 70144757 + 0.334470287753051 NA Intergenic Intergenic 193199 NR_131145 624549 Mm.116344 NR_131144 ENSMUSG00000109097 Gm29683 Gm44536 predicted gene, 29683 ncRNA unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-22 chr8 107114521 107114709 + 0.334470287753051 NA Intergenic Intergenic -18070 NR_104410 21750 Mm.6402 NM_009353 ENSMUSG00000031921 Terf2 TRF2 telomeric repeat binding factor 2 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-14 chr8 67726038 67726255 + 0.334470287753051 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 92149 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-3 chr13 45963360 45963573 + 0.334470287753051 NA intron (NM_001199304, intron 1 of 6) CpG 1525 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051 chr1 10954949 10955209 + 0.334470287753051 NA Intergenic Intergenic -38386 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-2 chr1 136137368 136137605 + 0.334470287753051 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 6096 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-16 chr4 63054770 63055005 + 0.334470287753051 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 89313 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-7 chr16 29882434 29882643 + 0.334470287753051 NA Intergenic Intergenic 96586 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-11 chr5 115632294 115632596 + 0.334470287753051 NA promoter-TSS (NR_027810) promoter-TSS (NR_027810) 458 NM_198163 77407 Mm.27553 NM_198163 ENSMUSG00000029518 Rab35 9530019H02Rik|AU040256|H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-16 chr8 44984877 44985183 + 0.334470287753051 NA intron (NM_001081286, intron 1 of 25) intron (NM_001081286, intron 1 of 25) 34822 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-14 chr4 108914764 108915019 + 0.334470287753051 NA intron (NM_023537, intron 2 of 4) intron (NM_023537, intron 2 of 4) 35821 NM_023537 69908 Mm.41580 NM_023537 ENSMUSG00000003411 Rab3b 2610528C18Rik RAB3B, member RAS oncogene family protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-18 chrX 99137235 99137481 + 0.334470287753051 NA intron (NM_010110, intron 1 of 4) intron (NM_010110, intron 1 of 4) 1297 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-15 chr6 82895302 82895661 + 0.334470287753051 NA Intergenic Intergenic -13628 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-10 chr15 77245727 77246037 + 0.334470287753051 NA promoter-TSS (NM_001358770) promoter-TSS (NM_001358770) -274 NM_001358770 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-18 chr9 21937116 21937437 + 0.334470287753051 NA promoter-TSS (NM_144935) promoter-TSS (NM_144935) 266 NM_001290299 235044 Mm.277521 NM_144935 ENSMUSG00000040563 Plppr2 Lppr2|PRG-4 phospholipid phosphatase related 2 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-7 chr12 86795526 86795766 + 0.334470287753051 NA Intergenic Intergenic 61277 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051 chr1 33997245 33997528 + 0.334470287753051 NA intron (NM_001276764, intron 3 of 102) intron (NM_001276764, intron 3 of 102) -14439 NM_133833 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-6 chr13 94133009 94133312 + 0.334470287753051 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 75364 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-13 chr7 79147110 79147372 + 0.334470287753051 NA intron (NM_001045489, intron 1 of 8) intron (NM_001045489, intron 1 of 8) 1819 NM_001045489 17304 Mm.1451 NM_008594 ENSMUSG00000030605 Mfge8 AA408458|AI325141|MFG-E8|MP47|Mfgm|P47|SED1|lactadherin milk fat globule-EGF factor 8 protein protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-14 chr2 6140457 6140697 + 0.334470287753051 NA TTS (NR_033470) TTS (NR_033470) 7694 NR_033471 100038358 Mm.353975 NR_033470 ENSMUSG00000102887 Gm10857 AU015850 predicted gene 10857 ncRNA common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-11 chr2 37748648 37748887 + 0.334470287753051 NA Intergenic Intergenic -27482 NM_001163566 241324 Mm.392369 NM_001163566 ENSMUSG00000035403 Crb2 5930402A21|BC043114 crumbs family member 2 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-6 chr13 52235869 52236138 + 0.334470287753051 NA Intergenic Intergenic 139262 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-10 chr18 33378269 33378458 + 0.334470287753051 NA Intergenic Intergenic 85271 NM_001267717 27528 Mm.407415 NM_053078 ENSMUSG00000042834 Nrep AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17 neuronal regeneration related protein protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-3 chr10 58255548 58255773 + 0.334470287753051 NA intron (NM_027375, intron 1 of 22) CpG 134 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-15 chr3 121660390 121660620 + 0.334470287753051 NA Intergenic Intergenic -10258 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-26 chrX 74085016 74085355 + 0.334470287753051 NA intron (NM_010788, intron 1 of 3) CpG 505 NM_010788 17257 Mm.131408 NM_010788 ENSMUSG00000031393 Mecp2 1500041B07Rik|D630021H01Rik|Mbd5|WBP10 methyl CpG binding protein 2 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-5 chr12 27941744 27942134 + 0.334470287753051 NA Intergenic Intergenic -599221 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-12 chr2 127331886 127332216 + 0.334470287753051 NA Intergenic Intergenic -4108 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-5 chr12 110798455 110798688 + 0.334470287753051 NA intron (NM_001347428, intron 2 of 2) intron (NM_001347428, intron 2 of 2) 42368 NM_011973 26448 Mm.140948 NM_011973 ENSMUSG00000056458 Mok RAGE1|Rage|Stk30 MOK protein kinase protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-6 chr18 62906075 62906337 + 0.334470287753051 NA Intergenic Intergenic -16121 NM_133237 494504 Mm.391102 NM_133237 ENSMUSG00000071847 Apcdd1 AB023957|AU041258|Drapc1|EIG180 adenomatosis polyposis coli down-regulated 1 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-5 chr12 54696186 54696378 + 0.334470287753051 NA promoter-TSS (NM_001331162) promoter-TSS (NM_001331162) -388 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-8 chr12 104991252 104991550 + 0.334470287753051 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 7276 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-23 chr8 94706394 94706778 + 0.334470287753051 NA Intergenic Intergenic -10344 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-9 chr16 56717803 56718025 + 0.334470287753051 NA promoter-TSS (NM_001252443) promoter-TSS (NM_001252443) -464 NM_001357126 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-11 chr17 26503350 26503632 + 0.334470287753051 NA Intergenic Intergenic 4981 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-20 chr7 109154731 109154997 + 0.334470287753051 NA intron (NM_001302205, intron 1 of 3) intron (NM_001302205, intron 1 of 3) 15648 NM_001302206 109594 Mm.360145 NM_057173 ENSMUSG00000036111 Lmo1 Rbtn-1|Rbtn1|Ttg1 LIM domain only 1 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-9 chr15 59716914 59717283 + 0.334470287753051 NA Intergenic Intergenic 68444 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-5 chr13 91223642 91223890 + 0.334470287753051 NA intron (NM_025770, intron 1 of 7) intron (NM_025770, intron 1 of 7) 221 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-11 chr18 64476142 64476458 + 0.334470287753051 NA intron (NM_007998, intron 3 of 10) B3A|SINE|B2 12798 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-4 chr11 6389559 6389846 + 0.334470287753051 NA Intergenic CpG -5423 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-10 chr16 97289065 97289309 + 0.334470287753051 NA Intergenic Intergenic -67541 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-21 chr7 110006269 110006553 + 0.334470287753051 NA intron (NR_037959, intron 1 of 2) intron (NR_037959, intron 1 of 2) 235 NR_037959 69781 Mm.440728 NR_037959 ENSMUSG00000101585 1600010M07Rik - RIKEN cDNA 1600010M07 gene ncRNA common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-14 chr3 40800379 40800601 + 0.334470287753051 NA intron (NR_045576, intron 1 of 15) CpG 539 NR_045576 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo like kinase 4 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-5 chr1 132329513 132329755 + 0.334470287753051 NA intron (NM_001195025, intron 5 of 7) intron (NM_001195025, intron 5 of 7) 13509 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-14 chr3 51916001 51916230 + 0.334470287753051 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 188891 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-15 chr3 142315495 142315898 + 0.334470287753051 NA intron (NM_001190857, intron 2 of 7) intron (NM_001190857, intron 2 of 7) 76154 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-9 chr13 108038770 108039108 + 0.334470287753051 NA Intergenic Intergenic -5535 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-8 chr2 33220283 33220523 + 0.334470287753051 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 4442 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-18 chr7 16366454 16366753 + 0.334470287753051 NA intron (NM_019748, intron 5 of 8) intron (NM_019748, intron 5 of 8) 21293 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-6 chr12 108495193 108495456 + 0.334470287753051 NA intron (NM_001043335, intron 4 of 21) intron (NM_001043335, intron 4 of 21) -59396 NM_001163394 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774|b2b2600Clo Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-18 chr7 68225518 68225740 + 0.334470287753051 NA intron (NM_010513, intron 20 of 20) intron (NM_010513, intron 20 of 20) 38604 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-9 chr17 8283412 8283659 + 0.334470287753051 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -278 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding unique_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-3 chr13 28958495 28958682 + 0.334470287753051 NA Intergenic CpG -4889 NM_009238 20677 Mm.240627 NM_009238 ENSMUSG00000076431 Sox4 AA682046|Sox-4 SRY (sex determining region Y)-box 4 protein-coding common_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-13 chr8 61622165 61622546 + 0.334470287753051 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -31186 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-4 chr10 111654768 111654973 + 0.334470287753051 NA Intergenic Intergenic -60597 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-2 chr10 62321501 62321786 + 0.334470287753051 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 18778 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding unique_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-2 chr11 31543031 31543309 + 0.334470287753051 NA Intergenic Intergenic 128692 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-16 chr9 78113459 78113671 + 0.334470287753051 NA intron (NM_019987, intron 1 of 13) CpG 327 NM_019987 56542 Mm.288719 NM_019987 ENSMUSG00000009828 Ick 2210420N10Rik|AI848300|Mrk intestinal cell kinase protein-coding common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-5 chr11 115833995 115834303 + 0.334470287753051 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 10091 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-9 chr18 24470765 24471071 + 0.334470287753051 NA promoter-TSS (NM_026529) promoter-TSS (NM_026529) 47 NM_026529 68046 Mm.276574 NM_026529 ENSMUSG00000024273 2700062C07Rik AI195775|C87515 RIKEN cDNA 2700062C07 gene protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-20 chr8 8990634 8990929 + 0.334470287753051 NA Intergenic Intergenic 141507 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-15 chr4 78235712 78235918 + 0.334470287753051 NA Intergenic Intergenic -23920 NM_011211 19266 Mm.184021 NM_011211 ENSMUSG00000028399 Ptprd 1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta protein tyrosine phosphatase, receptor type, D protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-19 chr7 97788696 97789177 + 0.334470287753051 NA 5' UTR (NM_001357364, exon 1 of 15) 5' UTR (NM_001357364, exon 1 of 15) 395 NM_001357364 18479 Mm.260227 NM_011035 ENSMUSG00000030774 Pak1 AW045634|PAK-1|Paka p21 (RAC1) activated kinase 1 protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-4 chr11 78328580 78328834 + 0.334470287753051 NA TTS (NM_001303423) TTS (NM_001303423) 285 NM_201406 276846 Mm.295908 NM_201406 ENSMUSG00000041958 Pigs BC058979|Gm393|Gm689 phosphatidylinositol glycan anchor biosynthesis, class S protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-7 chr12 76571776 76571996 + 0.334470287753051 NA intron (NM_153804, intron 14 of 18) intron (NM_153804, intron 14 of 18) -23961 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-12 chr2 154389867 154390120 + 0.334470287753051 NA intron (NM_009228, intron 2 of 7) B3A|SINE|B2 -17274 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-13 chr2 44927464 44927720 + 0.334470287753051 NA Intergenic CpG -65970 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding unique_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051 chr1 93714595 93714909 + 0.334470287753051 NA intron (NM_025920, intron 5 of 5) intron (NM_025920, intron 5 of 5) 17174 NM_001310761 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-3 chr10 75921900 75922117 + 0.334470287753051 NA promoter-TSS (NM_001161853) promoter-TSS (NM_001161853) -394 NM_001161853 20587 Mm.279751 NM_011418 ENSMUSG00000000902 Smarcb1 AU020204|Baf47|Ini1|SNF5/INI1|Snf5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 protein-coding unique_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-5 chr7 135607124 135607405 + 0.334470287753051 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 1436 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_14_14_-0.269303070836145_3.77223906019045_0.334470287753051-5 chr11 79200992 79201304 + 0.334470287753051 NA Intergenic Intergenic 41876 NM_001042565 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-15 chr9 22259462 22259717 + 0.334470287753051 NA intron (NM_181419, intron 1 of 4) CpG 306 NM_181419 235048 Mm.292381 NM_181419 ENSMUSG00000062794 Zfp599 6720416P20 zinc finger protein 599 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-8 chr12 31278193 31278481 + 0.334470287753051 NA intron (NM_008482, intron 4 of 32) intron (NM_008482, intron 4 of 32) 13043 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak2_16_12_0.116446118768604_3.75866277752539_0.334470287753051-4 chr15 79932380 79932650 + 0.334470287753051 NA exon (NM_144811, exon 1 of 7) exon (NM_144811, exon 1 of 7) 131 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-8 chr17 84255827 84256045 + 0.334470287753051 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -67989 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-12 chr18 74064404 74064668 + 0.334470287753051 NA intron (NM_172632, intron 1 of 5) CpG 413 NM_172632 225724 Mm.254517 NM_172632 ENSMUSG00000024558 Mapk4 A330097D03Rik|Erk3|Prkm4|p63Mapk mitogen-activated protein kinase 4 protein-coding common_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-3 chr1 151350183 151350551 + 0.334470287753051 NA intron (NM_001359263, intron 2 of 13) ID_B1|SINE|B4 5869 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding unique_peak2_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-16 chr3 146723804 146724216 + 0.334470287753051 NA Intergenic Intergenic 46228 NM_001164198 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding unique_peak1_13_14_-0.368136522243349_3.72282233448684_0.334470287753051-4 chr6 92450073 92450334 + 0.334470287753051 NA intron (NM_001134461, intron 2 of 7) intron (NM_001134461, intron 2 of 7) 31189 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak1_16_12_0.116446118768604_3.75866277752539_0.334470287753051-4 chr1 87551587 87551875 + 0.334470287753051 NA intron (NM_001111314, intron 1 of 14) intron (NM_001111314, intron 1 of 14) 22139 NM_001111314 53972 Mm.435439 NM_019867 ENSMUSG00000026259 Ngef Tims2|ephexin neuronal guanine nucleotide exchange factor protein-coding common_peak2_14_14_-0.269303070836145_3.77223906019045_0.334470287753051 chr1 33689168 33689393 + 0.334470287753051 NA Intergenic Intergenic 19456 NR_033199 67503 Mm.87069 NM_026204 ENSMUSG00000103746 1700001G17Rik - RIKEN cDNA 1700001G17 gene ncRNA common_peak2_60_54_-0.134203644221784_5.71425789141377_0.334445504886136 chr1 182025217 182026046 + 0.334445504886136 NA Intergenic Intergenic -5651 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak2_60_54_-0.134203644221784_5.71425789141377_0.334445504886136-2 chr18 38211288 38211960 + 0.334445504886136 NA Intergenic CpG -1862 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_60_54_-0.134203644221784_5.71425789141377_0.334445504886136 chr11 120437274 120437655 + 0.334445504886136 NA intron (NM_199469, intron 1 of 15) CpG 236 NM_001195023 217365 Mm.309520 NM_199469 ENSMUSG00000039703 Nploc4 AK129375|Npl4|mKIAA1499 NPL4 homolog, ubiquitin recognition factor protein-coding common_peak2_60_54_-0.134203644221784_5.71425789141377_0.334445504886136-3 chr7 125444705 125445393 + 0.334445504886136 NA intron (NM_029842, intron 1 of 7) CpG 429 NM_029842 77035 Mm.307239 NM_029842 ENSMUSG00000030752 Kdm8 3110005O21Rik|Jmjd5 lysine (K)-specific demethylase 8 protein-coding common_peak1_60_54_-0.134203644221784_5.71425789141377_0.334445504886136-2 chr19 41932725 41933281 + 0.334445504886136 NA promoter-TSS (NM_023740) promoter-TSS (NM_023740) 311 NM_001164561 66583 Mm.289086 NM_025644 ENSMUSG00000034321 Exosc1 2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561 exosome component 1 protein-coding common_peak1_65_50_0.0875856628530194_5.716218173398_0.334445504886124 chr11 54438264 54438866 + 0.334445504886124 NA intron (NM_173753, intron 1 of 17) CpG 386 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak1_65_50_0.0875856628530194_5.716218173398_0.334445504886124-3 chr6 145914897 145915558 + 0.334445504886124 NA Intergenic Intergenic -16646 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_65_50_0.0875856628530194_5.716218173398_0.334445504886124-2 chr15 82346000 82346301 + 0.334445504886124 NA TTS (NM_177391) TTS (NM_177391) 104 NM_026914 69029 Mm.260042 NM_026914 ENSMUSG00000022452 Smdt1 1500032L24Rik|Emre single-pass membrane protein with aspartate rich tail 1 protein-coding common_peak2_65_50_0.0875856628530194_5.716218173398_0.334445504886124 chr6 122811151 122811744 + 0.334445504886124 NA Intergenic CpG -8737 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak2_65_50_0.0875856628530194_5.716218173398_0.334445504886124-2 chr9 92541503 92542226 + 0.334445504886124 NA promoter-TSS (NM_001142916) promoter-TSS (NM_001142916) -359 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak2_146_114_0.06164871507589_6.87631440848232_0.334440925134904 chr11 29693026 29693987 + 0.334440925134904 NA promoter-TSS (NM_194051) promoter-TSS (NM_194051) -268 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak2_146_114_0.06164871507589_6.87631440848232_0.334440925134904-3 chr7 142371614 142372829 + 0.334440925134904 NA promoter-TSS (NM_177265) promoter-TSS (NM_177265) 38 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_146_114_0.06164871507589_6.87631440848232_0.334440925134904-2 chr17 71002748 71003908 + 0.334440925134904 NA promoter-TSS (NM_026064) promoter-TSS (NM_026064) -795 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_96_84_-0.0977803817266238_6.36050074527439_0.334340012190691-4 chr6 42513846 42514615 + 0.334340012190691 NA Intergenic Intergenic 24790 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding common_peak2_96_84_-0.0977803817266238_6.36050074527439_0.334340012190691 chr10 75517557 75518762 + 0.334340012190691 NA promoter-TSS (NM_001347201) promoter-TSS (NM_001347201) 117 NM_026095 67332 Mm.45151 NM_026095 ENSMUSG00000020180 Snrpd3 1700043E15Rik|2310009E13Rik|AW046420|SMD3 small nuclear ribonucleoprotein D3 protein-coding common_peak1_102_79_0.0756592701708643_6.3597577299728_0.334340012190691 chr11 60877949 60878795 + 0.334340012190691 NA intron (NM_001168507, intron 1 of 2) CpG 666 NM_173453 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak1_96_84_-0.0977803817266238_6.36050074527439_0.334340012190691-2 chr15 80234126 80234674 + 0.334340012190691 NA intron (NM_001357660, intron 1 of 5) CpG 320 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_95_84_-0.112625248838939_6.35307831171823_0.334340012190691 chr5 23417833 23418947 + 0.334340012190691 NA Intergenic CpG 15963 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_96_84_-0.0977803817266238_6.36050074527439_0.334340012190691-3 chr16 92608410 92609314 + 0.334340012190691 NA intron (NM_001111022, intron 6 of 6) intron (NM_001111022, intron 6 of 6) 88467 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_96_84_-0.0977803817266238_6.36050074527439_0.334340012190691 chr13 60897632 60898533 + 0.334340012190691 NA promoter-TSS (NM_001145801) promoter-TSS (NM_001145801) -635 NM_001145801 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding common_peak1_95_84_-0.112625248838939_6.35307831171823_0.334340012190691-2 chr7 116333380 116334280 + 0.334340012190691 NA intron (NM_026533, intron 2 of 5) CpG 360 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding common_peak2_96_84_-0.0977803817266238_6.36050074527439_0.334340012190691-2 chr4 137641914 137642983 + 0.334340012190691 NA intron (NM_001355588, intron 22 of 26) intron (NM_001355588, intron 22 of 26) -22278 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding common_peak1_690_545_0.0314983315481694_9.10850630669394_0.334301739443763 chr16 45840727 45845113 + 0.334301739443763 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 1458 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_200_157_0.0515528921174955_7.32955719423585_0.334179709910147 chr4 141721004 141723284 + 0.334179709910147 NA intron (NM_001017966, intron 1 of 9) intron (NM_001017966, intron 1 of 9) 1275 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak1_200_157_0.0515528921174955_7.32955719423585_0.334179709910147 chr9 85842165 85844609 + 0.334179709910147 NA intron (NM_001164792, intron 1 of 1) CpG 535 NM_001164792 21983 Mm.20864 NM_011627 ENSMUSG00000035274 Tpbg 5T4|AW495680|WAIF1 trophoblast glycoprotein protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-4 chr4 89440540 89440963 + 0.334168439396943 NA intron (NR_132431, intron 5 of 9) intron (NR_132431, intron 5 of 9) -129719 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-4 chr15 79774639 79775041 + 0.334168439396943 NA promoter-TSS (NM_017470) promoter-TSS (NM_017470) -373 NM_017470 54152 Mm.288159 NM_017470 ENSMUSG00000022420 Dnal4 D15Ertd424e|Dnalc4 dynein, axonemal, light chain 4 protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-5 chr4 141425051 141425550 + 0.334168439396943 NA TTS (NM_013868) TTS (NM_013868) 4521 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-11 chr7 109609290 109609881 + 0.334168439396943 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 6983 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-5 chr16 31602682 31603153 + 0.334168439396943 NA Intergenic Intergenic -15216 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-3 chr14 46635881 46636390 + 0.334168439396943 NA intron (NR_046460, intron 1 of 4) intron (NR_046460, intron 1 of 4) 1288 NR_046460 74458 Mm.390708 NR_046460 ENSMUSG00000115665 4933425B07Rik - RIKEN cDNA 4933425B07 gene ncRNA common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-4 chr17 35121574 35122211 + 0.334168439396943 NA promoter-TSS (NM_001303476) promoter-TSS (NM_001303476) 161 NM_001303446 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-8 chr9 75625830 75626071 + 0.334168439396943 NA exon (NM_027309, exon 1 of 3) exon (NM_027309, exon 1 of 3) 218 NM_027309 70082 Mm.19119 NM_027309 ENSMUSG00000032184 Lysmd2 2210402C18Rik|AV033872|AW538442 LysM, putative peptidoglycan-binding, domain containing 2 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-10 chr7 144964155 144964469 + 0.334168439396943 NA Intergenic Intergenic -24387 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-3 chr14 122105178 122105516 + 0.334168439396943 NA non-coding (NR_015586, exon 2 of 4) non-coding (NR_015586, exon 2 of 4) 1627 NR_015586 319727 Mm.215552 NR_015586 A330035P11Rik - RIKEN cDNA A330035P11 gene ncRNA common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-11 chrX 8145381 8145707 + 0.334168439396943 NA non-coding (NR_033561, exon 1 of 3) non-coding (NR_033561, exon 1 of 3) 117 NR_033561 70226 Mm.391639 NR_033561 ENSMUSG00000055188 Rbm3os 2900002K06Rik RNA binding motif protein 3, opposite strand ncRNA common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-12 chr8 110618746 110619136 + 0.334168439396943 NA exon (NM_146216, exon 1 of 19) exon (NM_146216, exon 1 of 19) 374 NR_151675 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-5 chr17 25833139 25833383 + 0.334168439396943 NA promoter-TSS (NM_019719) promoter-TSS (NM_019719) 100 NM_019719 56424 Mm.277599 NM_019719 ENSMUSG00000039615 Stub1 0610033N24Rik|2210017D18Rik|2310040B03Rik|AW046544|Chip STIP1 homology and U-Box containing protein 1 protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-5 chr4 153975287 153975661 + 0.334168439396943 NA promoter-TSS (NM_007859) promoter-TSS (NM_007859) -87 NM_177673 230967 Mm.297905 NM_177673 ENSMUSG00000039523 Cep104 A930027E11|AI115523|Kiaa0562|mKIAA0562 centrosomal protein 104 protein-coding unique_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-2 chr5 150385243 150385845 + 0.334168439396943 NA intron (NM_172887, intron 17 of 60) intron (NM_172887, intron 17 of 60) 116675 NR_024513 194292 Mm.300184 NR_024513 Gm5 Gm1812 predicted gene 5 ncRNA common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-2 chr11 79610577 79611077 + 0.334168439396943 NA intron (NR_003283, intron 2 of 2) intron (NR_003283, intron 2 of 2) 12336 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-10 chr4 136808043 136808479 + 0.334168439396943 NA intron (NM_010142, intron 1 of 15) intron (NM_010142, intron 1 of 15) 27751 NM_001290753 13844 Mm.250981 NM_010142 ENSMUSG00000028664 Ephb2 Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5 Eph receptor B2 protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-6 chr5 143180288 143180751 + 0.334168439396943 NA promoter-TSS (NM_177880) promoter-TSS (NM_177880) 256 NM_001359235 57782 Mm.320419 NM_021326 ENSMUSG00000061898 Rbak - RB-associated KRAB zinc finger protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943 chr1 58585644 58586114 + 0.334168439396943 NA promoter-TSS (NM_025597) promoter-TSS (NM_025597) 275 NM_001310599 213056 Mm.26272 NM_172513 ENSMUSG00000038174 Fam126b C130065N10Rik|D1Ertd53e|D630010C10 family with sequence similarity 126, member B protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-6 chr6 17978697 17979334 + 0.334168439396943 NA Intergenic Intergenic 51430 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-14 chr9 79213992 79214647 + 0.334168439396943 NA Intergenic Intergenic 304983 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-7 chr3 88624656 88625026 + 0.334168439396943 NA intron (NM_001198913, intron 1 of 21) intron (NM_001198913, intron 1 of 21) 3447 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-9 chr7 29444397 29445099 + 0.334168439396943 NA intron (NM_001081028, intron 2 of 22) intron (NM_001081028, intron 2 of 22) 60712 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-3 chr14 6107981 6108486 + 0.334168439396943 NA Intergenic Intergenic 179017 NM_001270812 100861615 Mm.488431 NM_001270812 ENSMUSG00000079396 LOC100861615 - alpha takusan-like protein-coding unique_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943 chr3 53103400 53103804 + 0.334168439396943 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 62055 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943 chr11 116817069 116817391 + 0.334168439396943 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 10816 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-3 chr2 152696642 152697204 + 0.334168439396943 NA intron (NM_010376, intron 10 of 11) intron (NM_010376, intron 10 of 11) 9775 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943 chr14 25530275 25530694 + 0.334168439396943 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -3955 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-7 chr9 72132575 72133087 + 0.334168439396943 NA Intergenic Intergenic -21012 NM_011544 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-3 chr12 102412878 102413305 + 0.334168439396943 NA intron (NM_011175, intron 3 of 13) intron (NM_011175, intron 3 of 13) 26722 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-9 chr4 43443237 43443614 + 0.334168439396943 NA 5' UTR (NM_011571, exon 1 of 10) 5' UTR (NM_011571, exon 1 of 10) 1148 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-8 chr6 59208922 59209501 + 0.334168439396943 NA intron (NM_001081145, intron 1 of 1) intron (NM_001081145, intron 1 of 1) 341 NM_001081145 68140 Mm.25843 NM_001081145 ENSMUSG00000049232 Tigd2 3632410O17Rik tigger transposable element derived 2 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-13 chr9 63742650 63743076 + 0.334168439396943 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 15131 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-7 chr2 144555682 144556114 + 0.334168439396943 NA promoter-TSS (NM_019787) promoter-TSS (NM_019787) -331 NM_001252544 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-10 chr4 148591665 148592278 + 0.334168439396943 NA intron (NM_009272, intron 1 of 6) CpG 458 NM_009272 20810 Mm.10 NM_009272 ENSMUSG00000006442 Srm AA407669|SpdST|SpdSy spermidine synthase protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-4 chr16 90885580 90885922 + 0.334168439396943 NA intron (NM_027627, intron 4 of 6) intron (NM_027627, intron 4 of 6) 49098 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943 chr12 83631623 83631927 + 0.334168439396943 NA promoter-TSS (NM_027349) promoter-TSS (NM_027349) -459 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-2 chr2 143915003 143915323 + 0.334168439396943 NA promoter-TSS (NM_019771) promoter-TSS (NM_019771) -168 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding unique_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943 chr8 22507802 22508312 + 0.334168439396943 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -31178 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-9 chr9 22070954 22071430 + 0.334168439396943 NA exon (NM_001310759, exon 1 of 9) exon (NM_001310759, exon 1 of 9) 184 NM_177318 319601 Mm.347707 NM_177318 ENSMUSG00000038895 Zfp653 E430039K05Rik|Znf653 zinc finger protein 653 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-2 chr11 78696774 78697240 + 0.334168439396943 NA 5' UTR (NM_008702, exon 1 of 11) 5' UTR (NM_008702, exon 1 of 11) 418 NM_008702 18099 Mm.9001 NM_008702 ENSMUSG00000017376 Nlk AI194375 nemo like kinase protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943 chr1 186444007 186444684 + 0.334168439396943 NA Intergenic Intergenic 114336 NR_131124 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-8 chr6 6216421 6216803 + 0.334168439396943 NA intron (NM_001177572, intron 1 of 17) intron (NM_001177572, intron 1 of 17) 561 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943 chr1 91455297 91455874 + 0.334168439396943 NA intron (NM_011066, intron 1 of 22) intron (NM_011066, intron 1 of 22) 3743 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-7 chr6 41548652 41549179 + 0.334168439396943 NA Intergenic Intergenic 27139 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-6 chr17 84113600 84113992 + 0.334168439396943 NA Intergenic Intergenic 35136 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-4 chr3 122321758 122322436 + 0.334168439396943 NA Intergenic Intergenic -28394 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-6 chr17 73377606 73377858 + 0.334168439396943 NA intron (NM_001033444, intron 2 of 22) intron (NM_001033444, intron 2 of 22) 21564 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-5 chr18 36525298 36525679 + 0.334168439396943 NA Intergenic Intergenic -2664 NM_172830 240215 Mm.135463 NM_172830 ENSMUSG00000024485 Slc4a9 AE4|D630003B07|D630024F24Rik solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-12 chr7 118533132 118533708 + 0.334168439396943 NA promoter-TSS (NM_001304758) promoter-TSS (NM_001304758) -64 NM_009940 12850 Mm.20634 NM_009940 ENSMUSG00000030652 Coq7 clk-1 demethyl-Q 7 protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-7 chr6 83775057 83775512 + 0.334168439396943 NA intron (NM_009357, intron 1 of 5) intron (NM_009357, intron 1 of 5) 528 NM_009357 21766 Mm.28371 NM_009357 ENSMUSG00000014748 Tex261 3110001O07Rik|AA409339|AI480706|AL033351|TEG-261 testis expressed gene 261 protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-9 chr9 79759926 79760311 + 0.334168439396943 NA promoter-TSS (NM_009945) promoter-TSS (NM_009945) -265 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-7 chr5 140791072 140791658 + 0.334168439396943 NA intron (NM_010302, intron 1 of 3) intron (NM_010302, intron 1 of 3) 39066 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding common_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943-2 chr13 28629442 28629982 + 0.334168439396943 NA intron (NR_045054, intron 5 of 7) intron (NR_045054, intron 5 of 7) 81161 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943 chr10 18234491 18235188 + 0.334168439396943 NA intron (NM_001346751, intron 1 of 4) intron (NM_001346751, intron 1 of 4) 142 NM_001346751 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-2 chr13 98684304 98684990 + 0.334168439396943 NA Intergenic Intergenic 10184 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-6 chr3 95855236 95855729 + 0.334168439396943 NA 5' UTR (NM_027541, exon 1 of 16) 5' UTR (NM_027541, exon 1 of 16) 271 NM_027541 70767 Mm.279872 NM_027541 ENSMUSG00000015748 Prpf3 3632413F13Rik pre-mRNA processing factor 3 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-4 chr15 78828659 78829047 + 0.334168439396943 NA Intergenic Intergenic -13794 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-13 chrX 153498337 153498652 + 0.334168439396943 NA exon (NM_018798, exon 1 of 1) exon (NM_018798, exon 1 of 1) 262 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-9 chr4 129600141 129600483 + 0.334168439396943 NA promoter-TSS (NM_029748) promoter-TSS (NM_029748) 336 NM_018799 54709 Mm.250874 NM_018799 ENSMUSG00000028798 Eif3i 36kDa|D4Ertd632e|Eif3s2|Trip1 eukaryotic translation initiation factor 3, subunit I protein-coding common_peak2_37_28_0.111182459417575_4.91357222483636_0.334168439396943-8 chr4 99829188 99829746 + 0.334168439396943 NA promoter-TSS (NM_145549) promoter-TSS (NM_145549) -33 NM_145549 230500 Mm.331727 NM_145549 ENSMUSG00000073791 Efcab7 mKIAA1799 EF-hand calcium binding domain 7 protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-3 chr12 110888584 110888904 + 0.334168439396943 NA promoter-TSS (NM_001081057) promoter-TSS (NM_001081057) 401 NM_027223 67236 Mm.287157 NM_026048 ENSMUSG00000021276 Cinp 1810047K05Rik|2810452K22Rik cyclin-dependent kinase 2 interacting protein protein-coding common_peak2_36_28_0.07297974592987_4.89447086809251_0.334168439396943-6 chr5 137314134 137314554 + 0.334168439396943 NA promoter-TSS (NM_011639) promoter-TSS (NM_011639) -103 NM_011639 22051 Mm.27063 NM_011639 ENSMUSG00000023348 Trip6 - thyroid hormone receptor interactor 6 protein-coding unique_peak1_36_28_0.07297974592987_4.89447086809251_0.334168439396943 chr6 112281287 112281917 + 0.334168439396943 NA intron (NM_144799, intron 1 of 5) intron (NM_144799, intron 1 of 5) 7844 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding unique_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943 chr19 34290494 34290915 + 0.334168439396943 NA promoter-TSS (NM_001146708) promoter-TSS (NM_001146708) 45 NM_001146708 14102 Mm.1626 NM_007987 ENSMUSG00000024778 Fas AI196731|APO1|APT1|CD95|TNFR6|Tnfrsf6|lpr Fas (TNF receptor superfamily member 6) protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943 chr1 125679802 125680623 + 0.334168439396943 NA intron (NM_027677, intron 1 of 1) intron (NM_027677, intron 1 of 1) 3216 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-5 chr18 66002147 66002665 + 0.334168439396943 NA exon (NM_001172062, exon 1 of 13) exon (NM_001172062, exon 1 of 13) 229 NM_027400 70361 Mm.290857 NM_027400 ENSMUSG00000041891 Lman1 2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58 lectin, mannose-binding, 1 protein-coding common_peak1_37_28_0.111182459417575_4.91357222483636_0.334168439396943-11 chr8 8661581 8661884 + 0.334168439396943 NA promoter-TSS (NM_010111) promoter-TSS (NM_010111) -959 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-8 chr3 107829162 107829623 + 0.334168439396943 NA Intergenic Intergenic -47838 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak1_33_31_-0.190169142663549_4.90491542866823_0.334168439396943-2 chr10 75517616 75517867 + 0.334168439396943 NA promoter-TSS (NM_175133) promoter-TSS (NM_175133) 231 NM_001347201 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak1_147_115_0.0588697867833821_6.88741588851926_0.334157720374157 chr19 59467171 59468813 + 0.334157720374157 NA Intergenic Intergenic 9302 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak1_321_270_-0.0517466491299743_8.05627571678888_0.334155737196019 chr15 99363757 99366084 + 0.334155737196019 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 5562 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_262_206_0.0469775850433267_7.71697575002099_0.334121100190377 chr19 57361053 57363486 + 0.334121100190377 NA intron (NM_145505, intron 1 of 16) intron (NM_145505, intron 1 of 16) 1260 NM_145505 226252 Mm.358870 NM_145505 ENSMUSG00000033478 Fam160b1 AI450540|mKIAA1600 family with sequence similarity 160, member B1 protein-coding common_peak1_594_469_0.0334649203797284_8.89324940675486_0.333945821227637 chr11 3535123 3539237 + 0.333945821227637 NA intron (NM_001159284, intron 3 of 21) intron (NM_001159284, intron 3 of 21) 2112 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak2_103_80_0.0715782124239999_6.37563910909662_0.333936129996735 chr11 50324352 50325611 + 0.333936129996735 NA intron (NM_001110500, intron 1 of 14) intron (NM_001110500, intron 1 of 14) 692 NM_001110499 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak1_148_116_0.0561326769418615_6.89843105805434_0.333879276883411 chr8 126944861 126945795 + 0.333879276883411 NA intron (NM_024214, intron 1 of 4) intron (NM_024214, intron 1 of 4) 593 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_66_51_0.0811132994992958_5.74099636789074_0.333814721158537-2 chr11 5862094 5862799 + 0.333814721158537 NA intron (NM_009636, intron 1 of 20) intron (NM_009636, intron 1 of 20) 580 NM_001291857 11568 Mm.3317 NM_009636 ENSMUSG00000020473 Aebp1 ACLP AE binding protein 1 protein-coding common_peak2_66_51_0.0811132994992958_5.74099636789074_0.333814721158537 chr8 111940741 111941094 + 0.333814721158537 NA intron (NM_026693, intron 1 of 3) CpG 214 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding common_peak1_66_51_0.0811132994992958_5.74099636789074_0.333814721158537 chr10 21295993 21296505 + 0.333814721158537 NA intron (NM_019702, intron 1 of 17) CpG 270 NM_001145209 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_66_51_0.0811132994992958_5.74099636789074_0.333814721158537-3 chr15 43477304 43477978 + 0.333814721158537 NA promoter-TSS (NR_046064) promoter-TSS (NR_046064) 412 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding common_peak1_66_51_0.0811132994992958_5.74099636789074_0.333814721158537-4 chr15 66881309 66882499 + 0.333814721158537 NA Intergenic Intergenic -9489 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_61_55_-0.136905382504822_5.73890223080519_0.333814721158525-4 chr8 94098602 94099077 + 0.333814721158525 NA promoter-TSS (NM_026116) promoter-TSS (NM_026116) -28 NM_026116 67378 Mm.292107 NM_026116 ENSMUSG00000031755 Bbs2 2410125H22Rik|AI447581 Bardet-Biedl syndrome 2 (human) protein-coding common_peak2_61_55_-0.136905382504822_5.73890223080519_0.333814721158525-2 chr3 136669217 136669894 + 0.333814721158525 NA promoter-TSS (NM_001293622) promoter-TSS (NM_001293622) -511 NM_008913 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak2_61_55_-0.136905382504822_5.73890223080519_0.333814721158525 chr11 96064753 96065351 + 0.333814721158525 NA exon (NM_172300, exon 1 of 7) exon (NM_172300, exon 1 of 7) 312 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding common_peak2_61_55_-0.136905382504822_5.73890223080519_0.333814721158525-5 chr8 106399038 106399581 + 0.333814721158525 NA Intergenic Intergenic -16030 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak1_61_55_-0.136905382504822_5.73890223080519_0.333814721158525-2 chr4 95160894 95161991 + 0.333814721158525 NA Intergenic CpG -109220 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_61_55_-0.136905382504822_5.73890223080519_0.333814721158525 chr15 102044726 102045697 + 0.333814721158525 NA Intergenic Intergenic 16995 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak2_61_55_-0.136905382504822_5.73890223080519_0.333814721158525-3 chr5 129019223 129019947 + 0.333814721158525 NA promoter-TSS (NM_009391) promoter-TSS (NM_009391) -571 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak2_61_55_-0.136905382504822_5.73890223080519_0.333814721158525-6 chr9 85327516 85328499 + 0.333814721158525 NA promoter-TSS (NM_001160378) promoter-TSS (NM_001160378) -857 NM_001160379 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_104_81_0.0675846105819309_6.39134430990905_0.333541926019859-3 chr9 57521272 57522265 + 0.333541926019859 NA intron (NM_007747, intron 1 of 4) CpG 536 NM_007747 12858 Mm.273403 NM_007747 ENSMUSG00000000088 Cox5a AA959768|CcOX cytochrome c oxidase subunit Va protein-coding common_peak2_98_86_-0.102096888796759_6.39189505145035_0.333541926019859-2 chr8 69901218 69902152 + 0.333541926019859 NA promoter-TSS (NM_032004) promoter-TSS (NM_032004) -499 NM_032004 83984 Mm.432504 NM_032004 ENSMUSG00000047654 Tssk6 Sstk|TSK-6|TSSK-6 testis-specific serine kinase 6 protein-coding common_peak1_104_81_0.0675846105819309_6.39134430990905_0.333541926019859 chr10 16589143 16590671 + 0.333541926019859 NA Intergenic Intergenic 505875 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_98_86_-0.102096888796759_6.39189505145035_0.333541926019859-2 chr8 105880515 105881636 + 0.333541926019859 NA TTS (NM_001357229) TTS (NM_001357229) 194 NM_181594 234699 Mm.28979 NM_181594 ENSMUSG00000036270 Edc4 BC022641 enhancer of mRNA decapping 4 protein-coding common_peak1_104_81_0.0675846105819309_6.39134430990905_0.333541926019859-2 chr3 9752282 9753117 + 0.333541926019859 NA intron (NM_053182, intron 1 of 7) intron (NM_053182, intron 1 of 7) 80980 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak2_104_81_0.0675846105819309_6.39134430990905_0.333541926019859-2 chr10 21784494 21785760 + 0.333541926019859 NA Intergenic Intergenic 94282 NR_045843 432436 Mm.244553 NM_001004162 ENSMUSG00000056716 Gm5420 EG432436 predicted gene 5420 ncRNA common_peak2_104_81_0.0675846105819309_6.39134430990905_0.333541926019859 chr1 87756032 87756741 + 0.333541926019859 NA intron (NM_029846, intron 1 of 17) CpG 375 NM_001205392 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding common_peak2_98_86_-0.102096888796759_6.39189505145035_0.333541926019859 chr1 179041033 179042029 + 0.333541926019859 NA intron (NM_027188, intron 10 of 11) intron (NM_027188, intron 10 of 11) 476510 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak1_98_86_-0.102096888796759_6.39189505145035_0.333541926019859 chr14 20641061 20641956 + 0.333541926019859 NA Intergenic Intergenic 15032 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding common_peak2_603_476_0.0336424891050395_8.91466670055803_0.33346776569077 chr8 84200966 84204461 + 0.33346776569077 NA Intergenic Intergenic -5805 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_205_161_0.0506823826003586_7.3651911941848_0.333373514645018 chr8 104442136 104443163 + 0.333373514645018 NA intron (NM_001013380, intron 1 of 12) CpG-14406 398 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak2_407_341_-0.0483509940417228_8.39367701786504_0.333344765893491 chr19 28677613 28680169 + 0.333344765893491 NA intron (NR_045330, intron 1 of 4) intron (NR_045330, intron 1 of 4) 667 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_151_118_0.0602357320907148_6.9249356293533_0.333336201323071 chr11 52360296 52361783 + 0.333336201323071 NA 5' UTR (NM_011694, exon 1 of 9) 5' UTR (NM_011694, exon 1 of 9) 177 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_143_124_-0.0881829951358704_6.92169278709415_0.333336201323071-2 chr2 147012577 147013867 + 0.333336201323071 NA intron (NM_001356402, intron 1 of 28) CpG 223 NM_001356402 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak1_143_124_-0.0881829951358704_6.92169278709415_0.333336201323071 chr15 25984452 25985988 + 0.333336201323071 NA intron (NM_144523, intron 1 of 5) CpG 854 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak1_151_118_0.0602357320907148_6.9249356293533_0.333336201323071 chr8 40307538 40308850 + 0.333336201323071 NA promoter-TSS (NR_106126) promoter-TSS (NR_106126) 143 NM_030110 78506 Mm.169893 NM_030110 ENSMUSG00000039478 Micu3 2900075B16Rik|Efha2 mitochondrial calcium uptake family, member 3 protein-coding common_peak1_67_52_0.0748554232000087_5.7653481661632_0.333207316140157-2 chr7 90128524 90129346 + 0.333207316140157 NA intron (NR_046006, intron 1 of 3) intron (NR_046006, intron 1 of 3) 539 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_67_52_0.0748554232000087_5.7653481661632_0.333207316140157-2 chr9 108783920 108784641 + 0.333207316140157 NA Intergenic Intergenic -11714 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak1_67_52_0.0748554232000087_5.7653481661632_0.333207316140157 chr6 83794779 83795571 + 0.333207316140157 NA promoter-TSS (NM_001164187) promoter-TSS (NM_001164187) 17 NM_001164187 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak2_67_52_0.0748554232000087_5.7653481661632_0.333207316140157 chr11 116623867 116624805 + 0.333207316140157 NA promoter-TSS (NM_001167680) promoter-TSS (NM_001167680) -84 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-2 chr17 26595281 26596029 + 0.333207316140145 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 34143 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-5 chr5 64864568 64865393 + 0.333207316140145 NA Intergenic Intergenic 61457 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-3 chr2 172370810 172371468 + 0.333207316140145 NA promoter-TSS (NM_001291185) promoter-TSS (NM_001291185) 136 NM_024199 67337 Mm.26944 NM_024199 ENSMUSG00000027498 Cstf1 1700057K18Rik|AI788832 cleavage stimulation factor, 3' pre-RNA, subunit 1 protein-coding common_peak1_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-4 chr7 66577551 66578657 + 0.333207316140145 NA Intergenic Intergenic 111457 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-7 chr7 58801234 58801857 + 0.333207316140145 NA intron (NM_009728, intron 10 of 20) intron (NM_009728, intron 10 of 20) 143343 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-3 chr17 23998703 23999452 + 0.333207316140145 NA promoter-TSS (NM_133731) promoter-TSS (NM_133731) -977 NM_133731 70835 Mm.157351 NM_133731 ENSMUSG00000045027 Prss22 4733401N09Rik|BSSP-4|SP001LA protease, serine 22 protein-coding common_peak1_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-2 chr15 76368923 76369438 + 0.333207316140145 NA exon (NM_021555, exon 1 of 6) exon (NM_021555, exon 1 of 6) 282 NM_021555 59053 Mm.133202 NM_021555 ENSMUSG00000022554 Hgh1 Brp16|D15Ertd741e|Fam203a|MNCb-5873 HGH1 homolog protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145 chr1 39556454 39557299 + 0.333207316140145 NA intron (NM_001033135, intron 5 of 6) intron (NM_001033135, intron 5 of 6) -8036 NR_028555 100217461 NR_028555 ENSMUSG00000077704 Snord89 MBII-289 small nucleolar RNA, C/D box 89 snoRNA common_peak1_62_56_-0.139519715917907_5.76313015620579_0.333207316140145 chr14 29968403 29968834 + 0.333207316140145 NA intron (NM_019979, intron 1 of 4) CpG 238 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-6 chr5 148928327 148928921 + 0.333207316140145 NA promoter-TSS (NM_153572) promoter-TSS (NM_153572) 23 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_62_56_-0.139519715917907_5.76313015620579_0.333207316140145-4 chr4 137471100 137471955 + 0.333207316140145 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 2724 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_99_87_-0.104187736058234_6.40733775060818_0.333157056450534-2 chr8 128450572 128451163 + 0.333157056450534 NA intron (NM_001358959, intron 6 of 16) intron (NM_001358959, intron 6 of 16) 91626 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_99_87_-0.104187736058234_6.40733775060818_0.333157056450534-2 chr15 76457138 76458308 + 0.333157056450534 NA exon (NM_198885, exon 1 of 2) exon (NM_198885, exon 1 of 2) 285 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak1_99_87_-0.104187736058234_6.40733775060818_0.333157056450534 chr2 170511148 170511797 + 0.333157056450534 NA non-coding (NR_040367, exon 1 of 3) non-coding (NR_040367, exon 1 of 3) 242 NM_001199902 109054 Mm.28808 NM_001013369 ENSMUSG00000052033 Pfdn4 0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4 prefoldin 4 protein-coding common_peak2_99_87_-0.104187736058234_6.40733775060818_0.333157056450534 chr13 40727807 40728947 + 0.333157056450534 NA exon (NM_011547, exon 2 of 7) exon (NM_011547, exon 2 of 7) 569 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-11 chr7 116262641 116263328 + 0.333081040816759 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -25208 NM_001305186 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-5 chr19 9077384 9077806 + 0.333081040816759 NA TTS (NM_001286518) TTS (NM_001286518) 10361 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-8 chr5 135778003 135778305 + 0.333081040816759 NA promoter-TSS (NM_008617) promoter-TSS (NM_008617) 147 NM_001289554 76571 Mm.247666 NM_029659 ENSMUSG00000019178 Styxl1 1700011C14Rik|Dusp24|Mkstyx serine/threonine/tyrosine interacting-like 1 protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-10 chr7 99519413 99519935 + 0.333081040816759 NA Intergenic Intergenic -15812 NM_178220 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak2_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-4 chr5 125475809 125476325 + 0.333081040816759 NA exon (NM_030210, exon 1 of 18) exon (NM_030210, exon 1 of 18) 194 NM_030210 78894 Mm.431573 NM_030210 ENSMUSG00000029482 Aacs 2210408B16Rik|SUR5 acetoacetyl-CoA synthetase protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-3 chr13 106947196 106947585 + 0.333081040816759 NA intron (NM_025447, intron 1 of 11) CpG 261 NM_025447 66254 Mm.9563 NM_025447 ENSMUSG00000021692 Dimt1 1500031M22Rik|AV111347|Dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759 chr10 24387965 24388236 + 0.333081040816759 NA Intergenic Intergenic 164583 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-5 chr6 72361946 72362343 + 0.333081040816759 NA intron (NM_001331167, intron 2 of 5) CpG 288 NM_001331171 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding common_peak2_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-2 chr10 71284809 71285210 + 0.333081040816759 NA intron (NM_145420, intron 1 of 6) CpG 253 NM_145420 216080 Mm.270530 NM_145420 ENSMUSG00000019927 Ube2d1 UBCH5 ubiquitin-conjugating enzyme E2D 1 protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-6 chr4 62519607 62519962 + 0.333081040816759 NA intron (NM_008525, intron 1 of 11) CpG 125 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak2_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-3 chr3 61364023 61364387 + 0.333081040816759 NA promoter-TSS (NM_028712) promoter-TSS (NM_028712) -302 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-9 chr7 30728949 30729409 + 0.333081040816759 NA TTS (NM_001290631) TTS (NM_001290631) 355 NM_027215 69804 Mm.27499 NM_027215 ENSMUSG00000006315 Tmem147 2010004E11Rik|5033425B17Rik|Nifie14 transmembrane protein 147 protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-2 chr12 69744583 69745258 + 0.333081040816759 NA TTS (NM_001361690) TTS (NM_001361690) 19024 NR_030450 751538 NR_030450 ENSMUSG00000076065 Mir681 Mirn681|mmu-mir-681 microRNA 681 ncRNA common_peak2_34_32_-0.19303812681265_4.94787505595213_0.333081040816759 chr1 134455409 134455912 + 0.333081040816759 NA 5' UTR (NM_153128, exon 1 of 12) 5' UTR (NM_153128, exon 1 of 12) 129 NM_001311136 240756 Mm.87398 NM_153128 ENSMUSG00000026455 Klhl12 C3ip1 kelch-like 12 protein-coding common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-4 chr13 110907231 110907619 + 0.333081040816759 NA non-coding (NR_131193, exon 5 of 5) non-coding (NR_131193, exon 5 of 5) -3579 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-6 chr7 49093304 49093675 + 0.333081040816759 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 68669 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak1_34_32_-0.19303812681265_4.94787505595213_0.333081040816759-7 chr5 110107862 110108197 + 0.333081040816759 NA exon (NM_145147, exon 1 of 10) exon (NM_145147, exon 1 of 10) 168 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-9 chr9 70283480 70284220 + 0.333081040816753 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 76500 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-10 chr3 103831513 103832075 + 0.333081040816753 NA promoter-TSS (NM_001142960) promoter-TSS (NM_001142960) -902 NM_001142959 229672 Mm.297245 NM_001142959 ENSMUSG00000044165 Bcl2l15 Bfk|Gm566 BCLl2-like 15 protein-coding unique_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-3 chr8 24518734 24519319 + 0.333081040816753 NA Intergenic Intergenic -34040 NR_035483 common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-4 chr14 101795215 101795906 + 0.333081040816753 NA intron (NM_201529, intron 2 of 30) intron (NM_201529, intron 2 of 30) -45063 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-6 chr2 29945036 29945584 + 0.333081040816753 NA intron (NM_028923, intron 9 of 15) intron (NM_028923, intron 9 of 15) 9901 NM_028923 74412 Mm.275121 NM_028923 ENSMUSG00000019715 Gle1 4933405K21Rik|AA553313|Gle1l GLE1 RNA export mediator (yeast) protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-12 chr7 19094704 19095494 + 0.333081040816753 NA exon (NM_011383, exon 1 of 3) exon (NM_011383, exon 1 of 3) 555 NM_011383 20475 Mm.3410 NM_011383 ENSMUSG00000040841 Six5 Dmahp|MDMAHP|TrexBF sine oculis-related homeobox 5 protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-7 chr2 117803453 117803919 + 0.333081040816753 NA TTS (NR_126427) TTS (NR_126427) 9116 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-9 chr2 152671825 152672510 + 0.333081040816753 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 2706 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-8 chr7 25268890 25269390 + 0.333081040816753 NA intron (NM_001302811, intron 1 of 20) intron (NM_001302811, intron 1 of 20) 1441 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-6 chr18 60613681 60614284 + 0.333081040816753 NA intron (NM_177340, intron 1 of 2) MIRc|SINE|MIR -3878 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753 chr1 86359857 86360237 + 0.333081040816753 NA promoter-TSS (NM_010880) promoter-TSS (NM_010880) 473 NR_015507 319336 Mm.389155 NR_015507 ENSMUSG00000073627 C130036L24Rik - RIKEN cDNA C130036L24 gene ncRNA common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-3 chr14 54883636 54884000 + 0.333081040816753 NA 5' UTR (NM_007537, exon 2 of 4) 5' UTR (NM_007537, exon 2 of 4) 393 NM_007537 12050 Mm.6967 NM_007537 ENSMUSG00000089682 Bcl2l2 AW048834|Bcl-w|Gtrgal2|Gtrosa41|bclw|c98 BCL2-like 2 protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753 chr13 13392958 13393452 + 0.333081040816753 NA exon (NM_031999, exon 1 of 7) exon (NM_031999, exon 1 of 7) 419 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-10 chr9 96478377 96478918 + 0.333081040816753 NA promoter-TSS (NM_011279) promoter-TSS (NM_011279) 28 NM_011279 19823 Mm.28235 NM_011279 ENSMUSG00000051234 Rnf7 Rbx2|SAG ring finger protein 7 protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-13 chr7 127691618 127692216 + 0.333081040816753 NA intron (NM_001347652, intron 5 of 5) intron (NM_001347652, intron 5 of 5) -16570 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-2 chr13 34993723 34994115 + 0.333081040816753 NA 5' UTR (NM_011868, exon 1 of 10) 5' UTR (NM_011868, exon 1 of 10) 225 NM_011868 23986 Mm.491141 NM_011868 ENSMUSG00000021417 Eci2 Acbd2|Drs1|Hca88|Peci enoyl-Coenzyme A delta isomerase 2 protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-8 chr2 137409933 137410587 + 0.333081040816753 NA Intergenic Intergenic -293740 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-5 chr15 36867152 36867688 + 0.333081040816753 NA Intergenic Intergenic -70491 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-3 chr15 82338498 82338854 + 0.333081040816753 NA intron (NM_001355546, intron 1 of 8) intron (NM_001355546, intron 1 of 8) 150 NM_001355546 17939 Mm.20325 NM_008669 ENSMUSG00000022453 Naga - N-acetyl galactosaminidase, alpha protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-7 chr2 39064940 39065433 + 0.333081040816753 NA intron (NM_001290649, intron 1 of 21) intron (NM_001290649, intron 1 of 21) 355 NR_110968 76899 Mm.131098 NM_029793 ENSMUSG00000026754 Golga1 0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97 golgi autoantigen, golgin subfamily a, 1 protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-4 chr15 96709995 96710299 + 0.333081040816753 NA Intergenic CpG -10419 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-2 chr13 32802217 32802746 + 0.333081040816753 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 451 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding unique_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753 chr2 127247035 127247646 + 0.333081040816753 NA promoter-TSS (NM_175145) promoter-TSS (NM_175145) 476 NM_025296 26371 Mm.45179 NM_025296 ENSMUSG00000003662 Ciao1 AW210570|Wdr39 cytosolic iron-sulfur protein assembly 1 protein-coding common_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-11 chr6 114967501 114967999 + 0.333081040816753 NA intron (NM_001356371, intron 1 of 5) intron (NM_001356371, intron 1 of 5) 1453 NM_001356371 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak1_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-2 chr2 173737535 173737982 + 0.333081040816753 NA intron (NM_019806, intron 1 of 5) CpG 187 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak2_38_29_0.0994831810740502_4.95663218614554_0.333081040816753-5 chr19 17263990 17264318 + 0.333081040816753 NA Intergenic Intergenic 75351 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_145_125_-0.0799194675072341_6.9373201897463_0.3330713427436 chr10 128410919 128412334 + 0.3330713427436 NA promoter-TSS (NR_104288) promoter-TSS (NR_104288) 10 NM_026259 67588 Mm.294120 NM_026259 ENSMUSG00000025373 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1 ring finger protein 41 protein-coding common_peak1_152_119_0.0575564866095988_6.93566883891332_0.3330713427436 chr14 54617347 54618803 + 0.3330713427436 NA promoter-TSS (NM_011186) promoter-TSS (NM_011186) -80 NM_011186 19173 Mm.8911 NM_011186 ENSMUSG00000022193 Psmb5 - proteasome (prosome, macropain) subunit, beta type 5 protein-coding common_peak2_208_163_0.0536918287330836_7.38439791898463_0.332984946316945 chr1 131096226 131097851 + 0.332984946316945 NA intron (NM_008551, intron 1 of 9) CpG 805 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak2_703_581_-0.0339198586042002_9.16791541360618_0.332969653379604 chr17 70848593 70853681 + 0.332969653379604 NA promoter-TSS (NM_009372) promoter-TSS (NM_009372) 73 NM_009372 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_146_126_-0.0815459207519007_6.94791172639622_0.332810792100067 chr8 11757571 11759165 + 0.332810792100067 NA promoter-TSS (NM_001113518) promoter-TSS (NM_001113518) 38 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak2_209_164_0.0517594213809538_7.39220192493629_0.332794142635373 chr3 107630784 107632282 + 0.332794142635373 NA exon (NM_153563, exon 1 of 21) exon (NM_153563, exon 1 of 21) 177 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding common_peak2_100_88_-0.106235531708984_6.42261566511191_0.33278119357548 chr7 44849987 44851061 + 0.33278119357548 NA TTS (NR_030488) TTS (NR_030488) 517 NM_001253920 67605 Mm.148007 NM_026270 ENSMUSG00000011096 Akt1s1 1110012J22Rik|AI227026|Lobe|Lobel|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding common_peak1_101_88_-0.0921219509757361_6.42967245547853_0.33278119357548-2 chr4 132273862 132275178 + 0.33278119357548 NA intron (NM_025579, intron 1 of 5) intron (NM_025579, intron 1 of 5) 145 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding common_peak1_101_88_-0.0921219509757361_6.42967245547853_0.33278119357548 chr2 162931302 162932151 + 0.33278119357548 NA exon (NM_026499, exon 1 of 6) exon (NM_026499, exon 1 of 6) 218 NM_026499 67996 Mm.24042 NM_026499 ENSMUSG00000016921 Srsf6 1210001E11Rik|AI314910|AW146126|Sfrs6 serine/arginine-rich splicing factor 6 protein-coding common_peak1_100_88_-0.106235531708984_6.42261566511191_0.33278119357548 chr16 30587184 30588259 + 0.33278119357548 NA promoter-TSS (NM_178069) promoter-TSS (NM_178069) -132 NM_178069 224092 Mm.567 NM_178069 ENSMUSG00000022538 Lsg1 5830465I20|AA409273|D16Bwg1547e large 60S subunit nuclear export GTPase 1 protein-coding common_peak2_106_83_0.0598486142503978_6.42224172990396_0.332781193575455 chr19 3906502 3907560 + 0.332781193575455 NA promoter-TSS (NM_001167784) promoter-TSS (NM_001167784) -48 NM_001167784 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak1_107_83_0.073174448548154_6.42890464705284_0.332781193575455 chr11 50324210 50325582 + 0.332781193575455 NA intron (NM_001110500, intron 1 of 14) intron (NM_001110500, intron 1 of 14) 777 NM_001110499 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak2_106_83_0.0598486142503978_6.42224172990396_0.332781193575455-2 chr9 106788302 106789361 + 0.332781193575455 NA intron (NM_030730, intron 1 of 21) intron (NM_030730, intron 1 of 21) 382 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak1_107_83_0.073174448548154_6.42890464705284_0.332781193575455-2 chr8 125253865 125254957 + 0.332781193575455 NA intron (NM_174854, intron 12 of 12) intron (NM_174854, intron 12 of 12) 200216 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak1_106_83_0.0598486142503978_6.42224172990396_0.332781193575455 chr2 31442902 31443722 + 0.332781193575455 NA Intergenic Intergenic -26958 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak1_840_664_0.0284655090016965_9.3914432848894_0.33274507110889 chr15 66890319 66894062 + 0.33274507110889 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 797 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_68_53_0.0688014018602408_5.78928820309359_0.332622013471003 chr10 120625007 120625820 + 0.332622013471003 NA Intergenic Intergenic -140319 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_69_53_0.0894135108090905_5.79959425756801_0.332622013471003 chr12 21373731 21374363 + 0.332622013471003 NA promoter-TSS (NM_001277266) promoter-TSS (NM_001277266) -415 NM_009615 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding common_peak1_68_53_0.0688014018602408_5.78928820309359_0.332622013471003-3 chr6 29348242 29349093 + 0.332622013471003 NA intron (NM_001285412, intron 1 of 6) intron (NM_001285412, intron 1 of 6) 561 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak2_69_53_0.0894135108090905_5.79959425756801_0.332622013471003 chr9 107770610 107771018 + 0.332622013471003 NA non-coding (NR_153190, exon 1 of 24) non-coding (NR_153190, exon 1 of 24) 188 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding common_peak1_69_53_0.0894135108090905_5.79959425756801_0.332622013471003-2 chr15 27801783 27803000 + 0.332622013471003 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -120849 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_69_53_0.0894135108090905_5.79959425756801_0.332622013471003-3 chr8 25753907 25754419 + 0.332622013471003 NA promoter-TSS (NR_154462) promoter-TSS (NR_154462) 117 NM_028102 72108 Mm.246875 NM_028102 ENSMUSG00000061313 Ddhd2 2010305K11Rik|SAMWD1|mKIAA0725 DDHD domain containing 2 protein-coding common_peak2_68_53_0.0688014018602408_5.78928820309359_0.332622013471003 chr2 174472375 174472945 + 0.332622013471003 NA intron (NM_025531, intron 1 of 5) CpG 281 NM_025531 66390 Mm.182294 NM_025531 ENSMUSG00000016257 Prelid3b 2310042G06Rik|AA407013|Slmo2 PRELI domain containing 3B protein-coding common_peak1_69_53_0.0894135108090905_5.79959425756801_0.332622013471003-4 chr9 96789438 96790518 + 0.332622013471003 NA Intergenic Intergenic 24416 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_68_53_0.0688014018602408_5.78928820309359_0.332622013471003-2 chr4 152325896 152326553 + 0.332622013471003 NA intron (NR_102291, intron 1 of 4) CpG 498 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding common_peak2_64_57_-0.119840901491824_5.79806054438166_0.33262201347099 chr11 78364717 78365563 + 0.33262201347099 NA intron (NM_008238, intron 6 of 8) intron (NM_008238, intron 6 of 8) 18430 NM_001313987 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding common_peak2_64_57_-0.119840901491824_5.79806054438166_0.33262201347099-2 chr5 121452698 121453204 + 0.33262201347099 NA promoter-TSS (NM_026129) promoter-TSS (NM_026129) 242 NM_029912 77462 Mm.358781 NM_029912 ENSMUSG00000029452 Tmem116 4930406A18Rik|4930513P12Rik|C030022K24Rik transmembrane protein 116 protein-coding common_peak1_63_57_-0.142050910056264_5.78695554009944_0.33262201347099 chr2 92433388 92434008 + 0.33262201347099 NA intron (NM_009963, intron 1 of 11) intron (NM_009963, intron 1 of 11) 371 NM_009963 12953 Mm.254181 NM_009963 ENSMUSG00000068742 Cry2 AV006279|D130054K12Rik cryptochrome 2 (photolyase-like) protein-coding common_peak1_63_57_-0.142050910056264_5.78695554009944_0.33262201347099-2 chr7 109671112 109671899 + 0.33262201347099 NA Intergenic Intergenic -32232 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding common_peak1_64_57_-0.119840901491824_5.79806054438166_0.33262201347099 chr5 100415465 100416186 + 0.33262201347099 NA intron (NM_001359344, intron 1 of 26) intron (NM_001359344, intron 1 of 26) 409 NM_001359323 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak1_63_57_-0.142050910056264_5.78695554009944_0.33262201347099-3 chr9 65909041 65909931 + 0.33262201347099 NA promoter-TSS (NM_019797) promoter-TSS (NM_019797) 476 NM_173185 214897 Mm.325816 NM_173185 ENSMUSG00000032384 Csnk1g1 9130020E21Rik casein kinase 1, gamma 1 protein-coding common_peak2_64_57_-0.119840901491824_5.79806054438166_0.33262201347099-3 chr5 134551394 134552150 + 0.33262201347099 NA intron (NM_001039162, intron 1 of 15) intron (NM_001039162, intron 1 of 15) 662 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak2_201_172_-0.0721853079525561_7.39853557366045_0.332605604177473 chr19 5490528 5491829 + 0.332605604177473 NA intron (NM_007687, intron 1 of 3) CpG 723 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding common_peak2_147_127_-0.0831492180890461_6.95842539095548_0.332554445126597 chr15 6707816 6709307 + 0.332554445126597 NA intron (NM_030168, intron 1 of 37) CpG 180 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak2_266_225_-0.0580911133610478_7.79113340573466_0.33247384703261 chr11 4265236 4267654 + 0.33247384703261 NA promoter-TSS (NM_001039537) promoter-TSS (NM_001039537) -351 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_212_166_0.0546970718868902_7.4110528284175_0.332419290839554 chr6 82772659 82774343 + 0.332419290839554 NA intron (NM_013820, intron 1 of 17) CpG 953 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_102_89_-0.0942657312714479_6.44472023069395_0.332414024846389 chr13 90089787 90090815 + 0.332414024846389 NA promoter-TSS (NM_028012) promoter-TSS (NM_028012) 634 NM_025335 66074 Mm.241387 NM_025335 ENSMUSG00000012422 Tmem167 0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a transmembrane protein 167 protein-coding common_peak2_108_84_0.0693039489907443_6.44404291063307_0.332414024846389 chr2 151973626 151975083 + 0.332414024846389 NA promoter-TSS (NM_001289151) promoter-TSS (NM_001289151) -373 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_108_84_0.0693039489907443_6.44404291063307_0.332414024846389 chr13 98814451 98815263 + 0.332414024846389 NA intron (NM_172591, intron 1 of 25) CpG 592 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_149_128_-0.0751477706167352_6.97365337011489_0.332302200896337-2 chr8 47991146 47992004 + 0.332302200896337 NA Intergenic Intergenic -1024 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_149_128_-0.0751477706167352_6.97365337011489_0.332302200896337 chr15 100615552 100616605 + 0.332302200896337 NA promoter-TSS (NR_045701) promoter-TSS (NR_045701) 416 NM_011873 23994 Mm.486175 NM_011873 ENSMUSG00000000346 Dazap2 AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058 DAZ associated protein 2 protein-coding common_peak1_156_122_0.0589028056851664_6.97196590818182_0.332302200896337 chr2 126363734 126365099 + 0.332302200896337 NA intron (NM_001359975, intron 20 of 27) MIRc|SINE|MIR 127137 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_148_128_-0.0847298588979877_6.96886232597426_0.332302200896337 chr8 79028735 79030348 + 0.332302200896337 NA intron (NM_001294279, intron 1 of 14) CpG 1104 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak2_204_174_-0.0676496250512564_7.4173862993067_0.332235163458577 chr11 4307498 4309536 + 0.332235163458577 NA Intergenic Intergenic 41721 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-11 chr6 42566223 42566505 + 0.332077462497413 NA Intergenic Intergenic -27344 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413 chr1 78745850 78746148 + 0.332077462497413 NA Intergenic Intergenic -70912 NM_021342 57814 Mm.24386 NM_021342 ENSMUSG00000047330 Kcne4 AW487937|MiRP3 potassium voltage-gated channel, Isk-related subfamily, gene 4 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-10 chr2 30619162 30619384 + 0.332077462497413 NA Intergenic Intergenic 24229 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-5 chr11 80538646 80538847 + 0.332077462497413 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -29640 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-3 chr1 170912006 170912215 + 0.332077462497413 NA exon (NM_001029984, exon 3 of 6) exon (NM_001029984, exon 3 of 6) 831 NM_001029984 435653 Mm.337931 NM_001029984 ENSMUSG00000070524 Fcrlb FREB-2|FREB2|FcRL2|Fcrlm2|Fcry|mFCRL2 Fc receptor-like B protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-2 chr13 103334697 103334889 + 0.332077462497413 NA promoter-TSS (NM_175171) promoter-TSS (NM_175171) -301 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-9 chr12 40445554 40445794 + 0.332077462497413 NA promoter-TSS (NM_172803) promoter-TSS (NM_172803) 116 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-8 chr15 11831861 11832287 + 0.332077462497413 NA Intergenic Intergenic 73600 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding unique_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-6 chr8 109143452 109143764 + 0.332077462497413 NA intron (NR_126329, intron 2 of 9) intron (NR_126329, intron 2 of 9) 68386 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-4 chr2 24479325 24479571 + 0.332077462497413 NA Intergenic Intergenic -3849 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-13 chr4 154022796 154023019 + 0.332077462497413 NA 3' UTR (NM_001163722, exon 4 of 4) 3' UTR (NM_001163722, exon 4 of 4) 3137 NM_001163722 68859 Mm.477488 NM_001033144 ENSMUSG00000078350 Smim1 0610011H04Rik|1190007F08Rik|2700009I11Rik small integral membrane protein 1 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-11 chr2 35264846 35265155 + 0.332077462497413 NA intron (NM_001206368, intron 1 of 16) intron (NM_001206368, intron 1 of 16) -1744 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-13 chr5 24822866 24823330 + 0.332077462497413 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 19263 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-15 chr7 97696306 97696533 + 0.332077462497413 NA promoter-TSS (NM_023671) promoter-TSS (NM_023671) 48 NR_154552 102641859 Mm.211743 NR_154551 Rsf1os2 Gm15623 remodeling and spacing factor 1, opposite strand 2 ncRNA common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-9 chr2 145842738 145843111 + 0.332077462497413 NA intron (NM_028724, intron 4 of 12) intron (NM_028724, intron 4 of 12) 56808 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-8 chr17 10316722 10317178 + 0.332077462497413 NA intron (NM_021881, intron 1 of 6) intron (NM_021881, intron 1 of 6) 2411 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-3 chr10 68167175 68167411 + 0.332077462497413 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 111433 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413 chr1 72450165 72450444 + 0.332077462497413 NA intron (NM_001045533, intron 2 of 3) intron (NM_001045533, intron 2 of 3) 86260 NM_001045533 381270 Mm.337023 NM_001045533 ENSMUSG00000039372 March4 BC056494|mKIAA1399 membrane-associated ring finger (C3HC4) 4 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-3 chr1 195033728 195034190 + 0.332077462497413 NA non-coding (NR_015566, exon 8 of 8) non-coding (NR_015566, exon 8 of 8) -3081 NR_029809 723963 NR_029809 ENSMUSG00000065412 Mir29b-2 Mirn29b-2|mir-29b-2 microRNA 29b-2 ncRNA common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-6 chr11 94489670 94490007 + 0.332077462497413 NA 3' UTR (NM_027984, exon 10 of 10) 3' UTR (NM_027984, exon 10 of 10) -4528 NM_144827 217116 Mm.156123 NM_144827 ENSMUSG00000020867 Spata20 Tisp78 spermatogenesis associated 20 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-11 chr4 137994778 137995135 + 0.332077462497413 NA intron (NM_001256195, intron 2 of 34) intron (NM_001256195, intron 2 of 34) 1500 NM_172703 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-15 chr4 135309268 135309530 + 0.332077462497413 NA Intergenic Intergenic -36639 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-3 chr17 79598246 79598504 + 0.332077462497413 NA Intergenic Intergenic -16525 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-9 chr5 66165309 66165537 + 0.332077462497413 NA Intergenic Intergenic -13469 NM_001127382 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-14 chr6 51120536 51120910 + 0.332077462497413 NA Intergenic Intergenic 149187 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-12 chr3 101070651 101070928 + 0.332077462497413 NA intron (NM_011197, intron 4 of 8) intron (NM_011197, intron 4 of 8) 39377 NM_011197 19221 Mm.24807 NM_011197 ENSMUSG00000027864 Ptgfrn 4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45 prostaglandin F2 receptor negative regulator protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-13 chr6 6203525 6203854 + 0.332077462497413 NA intron (NM_001177572, intron 1 of 17) intron (NM_001177572, intron 1 of 17) 13484 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-6 chr11 8455056 8455384 + 0.332077462497413 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 209315 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-16 chr6 34579172 34579423 + 0.332077462497413 NA Intergenic Intergenic -19207 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-18 chr8 126793539 126793988 + 0.332077462497413 NA Intergenic Intergenic -55257 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-6 chr3 79153316 79153553 + 0.332077462497413 NA Intergenic Intergenic -7559 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-4 chr2 172466872 172467224 + 0.332077462497413 NA intron (NM_025542, intron 8 of 8) intron (NM_025542, intron 8 of 8) -5506 NM_029608 76426 Mm.46148 NM_029608 ENSMUSG00000027505 Fam209 1700029J11Rik family with sequence similarity 209 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-16 chr7 98544804 98545032 + 0.332077462497413 NA Intergenic Intergenic 50696 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-2 chr16 5254634 5254856 + 0.332077462497413 NA intron (NM_027446, intron 1 of 7) intron (NM_027446, intron 1 of 7) 1211 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-7 chr15 84279575 84279893 + 0.332077462497413 NA intron (NM_133167, intron 3 of 12) intron (NM_133167, intron 3 of 12) -44986 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-11 chr4 62970045 62970329 + 0.332077462497413 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 4613 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-2 chr1 155054646 155054868 + 0.332077462497413 NA Intergenic Intergenic 28507 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-12 chr17 75168840 75169111 + 0.332077462497413 NA intron (NM_019919, intron 4 of 33) intron (NM_019919, intron 4 of 33) -9806 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-2 chr1 132328052 132328330 + 0.332077462497413 NA exon (NM_028778, exon 4 of 7) exon (NM_028778, exon 4 of 7) 12066 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-18 chrX 53669849 53670219 + 0.332077462497413 NA exon (NM_001018063, exon 1 of 1) exon (NM_001018063, exon 1 of 1) 374 NM_001018063 553127 Mm.328602 NM_001018063 ENSMUSG00000067924 Rtl8b Cxx1b|Mart8c retrotransposon Gag like 8B protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-5 chr11 29130875 29131192 + 0.332077462497413 NA intron (NM_027869, intron 1 of 27) intron (NM_027869, intron 1 of 27) 282 NM_027869 71701 Mm.211131 NM_027869 ENSMUSG00000020464 Pnpt1 1200003F12Rik|Old35|PNPase|Pnptl1 polyribonucleotide nucleotidyltransferase 1 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-14 chr2 167657243 167657498 + 0.332077462497413 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 4174 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-3 chr13 110924375 110924654 + 0.332077462497413 NA Intergenic Intergenic -20668 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA unique_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-3 chr3 61294551 61294820 + 0.332077462497413 NA Intergenic Intergenic -69822 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-8 chr12 8546062 8546279 + 0.332077462497413 NA intron (NM_177802, intron 2 of 6) intron (NM_177802, intron 2 of 6) -6604 NM_001286385 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-9 chr17 34116852 34117256 + 0.332077462497413 NA non-coding (NR_037970, exon 2 of 13) non-coding (NR_037970, exon 2 of 13) 2846 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-12 chr9 95194589 95194817 + 0.332077462497413 NA intron (NM_177909, intron 14 of 15) intron (NM_177909, intron 14 of 15) 212567 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-4 chr14 33247467 33247690 + 0.332077462497413 NA intron (NM_153800, intron 2 of 10) intron (NM_153800, intron 2 of 10) 30755 NM_153800 239027 Mm.318350 NM_153800 ENSMUSG00000063506 Arhgap22 B230341L19Rik|RHOGAP2|p68RacGAP Rho GTPase activating protein 22 protein-coding unique_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413 chr15 61164977 61165332 + 0.332077462497413 NA Intergenic Intergenic -243884 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-13 chr19 5956062 5956324 + 0.332077462497413 NA intron (NM_001164057, intron 4 of 17) intron (NM_001164057, intron 4 of 17) 8013 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-8 chr3 96098345 96098574 + 0.332077462497413 NA Intergenic Intergenic -6068 NM_001025613 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-19 chrX 73715735 73716037 + 0.332077462497413 NA promoter-TSS (NM_007435) promoter-TSS (NM_007435) 318 NM_012060 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding unique_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-2 chr18 16889605 16889866 + 0.332077462497413 NA Intergenic Intergenic 73328 NR_045399 328906 Mm.136064 NR_045399 ENSMUSG00000086095 Gm15328 D830029L11 predicted gene 15328 ncRNA unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-14 chr5 36723912 36724236 + 0.332077462497413 NA Intergenic Intergenic 24605 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-12 chr7 28950568 28950930 + 0.332077462497413 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 11583 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-16 chr8 33898170 33898370 + 0.332077462497413 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 31593 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-11 chr15 102205708 102205965 + 0.332077462497413 NA promoter-TSS (NM_001359126) promoter-TSS (NM_001359126) -784 NM_001359128 246277 Mm.296382 NM_144942 ENSMUSG00000023044 Csad Csd cysteine sulfinic acid decarboxylase protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-18 chr9 63979711 63979958 + 0.332077462497413 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 42225 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-9 chr17 46253950 46254511 + 0.332077462497413 NA promoter-TSS (NM_001111142) promoter-TSS (NM_001111142) 65 NM_001111142 224813 Mm.70999 NM_001111142 ENSMUSG00000071073 Lrrc73 Gm88 leucine rich repeat containing 73 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-7 chr2 32620997 32621286 + 0.332077462497413 NA promoter-TSS (NM_001198790) promoter-TSS (NM_001198790) -617 NM_001198790 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-4 chr10 80141033 80141282 + 0.332077462497413 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1118 NM_001347092 66043 Mm.278560 NM_025313 ENSMUSG00000003072 Atp5d 0610008F14Rik|1500000I11Rik|AA960090|AI876556|AU020773|Atp5f1d|C85518 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-14 chr7 3665159 3665373 + 0.332077462497413 NA TTS (NM_181820) TTS (NM_181820) 574 NM_027203 69757 Mm.389782 NM_027203 ENSMUSG00000078813 Leng1 1500001K17Rik leukocyte receptor cluster (LRC) member 1 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-5 chr15 86213255 86213460 + 0.332077462497413 NA Intergenic Intergenic -1102 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-10 chr4 136436517 136436868 + 0.332077462497413 NA intron (NM_001285484, intron 1 of 1) intron (NM_001285484, intron 1 of 1) 12080 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-17 chr6 72511435 72511677 + 0.332077462497413 NA Intergenic Intergenic -32835 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-4 chr10 4431838 4432133 + 0.332077462497413 NA promoter-TSS (NM_024261) promoter-TSS (NM_024261) 403 NM_025343 66084 Mm.153111 NM_025343 ENSMUSG00000019763 Rmnd1 0610042C05Rik|AA408137|AI462664|AW536662 required for meiotic nuclear division 1 homolog protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-6 chr16 86302723 86302960 + 0.332077462497413 NA Intergenic Intergenic -401716 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-7 chr14 66261180 66261438 + 0.332077462497413 NA intron (NM_001162366, intron 1 of 30) intron (NM_001162366, intron 1 of 30) 19743 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-12 chr5 151114176 151114446 + 0.332077462497413 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 75882 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-19 chrX 19157001 19157450 + 0.332077462497413 NA Intergenic Intergenic -10254 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-2 chr11 102962789 102963220 + 0.332077462497413 NA intron (NR_037963, intron 1 of 2) intron (NR_037963, intron 1 of 2) 1150 NR_037963 69739 Mm.276539 NR_037963 ENSMUSG00000085338 2410004I01Rik - RIKEN cDNA 2410004I01 gene ncRNA common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413 chr1 81950905 81951148 + 0.332077462497413 NA Intergenic Intergenic -180890 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-15 chr7 68225424 68225708 + 0.332077462497413 NA intron (NM_010513, intron 20 of 20) intron (NM_010513, intron 20 of 20) 38667 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-7 chr3 89337541 89337753 + 0.332077462497413 NA intron (NM_007910, intron 1 of 3) CpG 381 NM_007910 13639 Mm.16332 NM_007910 ENSMUSG00000028040 Efna4 EFL-4|Epl4|LERK-4 ephrin A4 protein-coding unique_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-5 chr5 124327675 124327878 + 0.332077462497413 NA promoter-TSS (NM_028310) promoter-TSS (NM_028310) 196 NM_001081323 269702 Mm.60224 NM_001081323 ENSMUSG00000038126 Mphosph9 4930548D04Rik|9630025B04Rik|AW413446|AW547060|B930097C17Rik|C87456|MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413 chr1 69460842 69461128 + 0.332077462497413 NA Intergenic Intergenic 224975 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-13 chr9 103043218 103043453 + 0.332077462497413 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 34846 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-13 chr7 80324247 80324456 + 0.332077462497413 NA TTS (NM_133952) TTS (NM_133952) 103 NM_173445 269955 Mm.474502 NM_173445 ENSMUSG00000038930 Rccd1 5830436H09|E430018M08Rik RCC1 domain containing 1 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-12 chr4 101354389 101354744 + 0.332077462497413 NA intron (NR_040640, intron 1 of 3) intron (NR_040640, intron 1 of 3) 783 NR_040640 68400 Mm.272098 NR_040640 ENSMUSG00000087361 0610043K17Rik - RIKEN cDNA 0610043K17 gene ncRNA unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-10 chr18 69344592 69344900 + 0.332077462497413 NA promoter-TSS (NM_001083967) promoter-TSS (NM_001083967) 254 NM_013685 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-6 chr19 15924112 15924379 + 0.332077462497413 NA intron (NM_177420, intron 1 of 8) intron (NM_177420, intron 1 of 8) 377 NM_001205339 107272 Mm.289936 NM_177420 ENSMUSG00000024640 Psat1 D8Ertd814e|EPIP|PSA|Psat phosphoserine aminotransferase 1 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-10 chr5 123572697 123572947 + 0.332077462497413 NA intron (NM_001359513, intron 1 of 11) CpG 193 NM_001359513 77573 Mm.41372 NM_029929 ENSMUSG00000029434 Vps33a 3830421M04Rik|AI503300|AW048546|AW554476|bf VPS33A CORVET/HOPS core subunit protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-4 chr15 38929028 38929238 + 0.332077462497413 NA Intergenic Intergenic -4776 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-7 chr11 121703636 121703890 + 0.332077462497413 NA intron (NM_144797, intron 1 of 3) intron (NM_144797, intron 1 of 3) 1336 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-16 chr5 113990788 113990992 + 0.332077462497413 NA intron (NM_198109, intron 1 of 14) intron (NM_198109, intron 1 of 14) 2867 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot protein phosphatase 1 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-6 chr12 73110866 73111138 + 0.332077462497413 NA intron (NM_001362272, intron 2 of 2) intron (NM_001362272, intron 2 of 2) 2243 NM_011382 20474 Mm.249575 NM_011382 ENSMUSG00000034460 Six4 AI047561|AREC3|TrexBF sine oculis-related homeobox 4 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-18 chr8 117179210 117179444 + 0.332077462497413 NA intron (NM_001081151, intron 1 of 10) intron (NM_001081151, intron 1 of 10) 21192 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding unique_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-4 chr4 62757242 62757526 + 0.332077462497413 NA Intergenic Intergenic 83410 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-2 chr1 69460839 69461087 + 0.332077462497413 NA Intergenic Intergenic 224997 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-7 chr2 72314718 72314954 + 0.332077462497413 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 29135 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding unique_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-3 chr13 113455039 113455311 + 0.332077462497413 NA intron (NR_045501, intron 5 of 6) intron (NR_045501, intron 5 of 6) 47669 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-5 chr17 26510036 26510241 + 0.332077462497413 NA Intergenic Intergenic -1666 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413 chr1 34111781 34112001 + 0.332077462497413 NA intron (NM_001276764, intron 5 of 102) intron (NM_001276764, intron 5 of 102) -5468 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-2 chr1 167282825 167283135 + 0.332077462497413 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 2147 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-14 chr8 22537665 22537939 + 0.332077462497413 NA intron (NM_011394, intron 2 of 10) intron (NM_011394, intron 2 of 10) 56011 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-3 chr1 118628154 118628414 + 0.332077462497413 NA intron (NM_023755, intron 1 of 14) intron (NM_023755, intron 1 of 14) 339 NM_023755 81879 Mm.24621 NM_023755 ENSMUSG00000026380 Tfcp2l1 1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1 transcription factor CP2-like 1 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-10 chr4 155735263 155735618 + 0.332077462497413 NA exon (NM_001101506, exon 2 of 4) exon (NM_001101506, exon 2 of 4) 636 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-9 chr4 132212432 132212661 + 0.332077462497413 NA promoter-TSS (NM_145393) promoter-TSS (NM_145393) -290 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-15 chr5 148626544 148626866 + 0.332077462497413 NA Intergenic Intergenic -73917 NM_001359199 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-8 chr4 154294388 154294685 + 0.332077462497413 NA intron (NM_001112744, intron 1 of 14) intron (NM_001112744, intron 1 of 14) 5359 NM_001112744 230972 Mm.38481 NM_001112744 ENSMUSG00000029032 Arhgef16 - Rho guanine nucleotide exchange factor (GEF) 16 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-17 chr8 86800464 86800899 + 0.332077462497413 NA Intergenic Intergenic -54675 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-5 chr2 35259942 35260325 + 0.332077462497413 NA intron (NM_001206368, intron 1 of 16) B1_Mur4|SINE|Alu 3774 NM_001206368 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413 chr1 151239507 151239776 + 0.332077462497413 NA Intergenic Intergenic 101607 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-11 chr5 143048313 143048776 + 0.332077462497413 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 64476 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413 chr10 91199737 91200081 + 0.332077462497413 NA Intergenic Intergenic 20710 NR_151510 102633753 Mm.416936 NR_151510 4930534H03Rik - RIKEN cDNA 4930534H03 gene ncRNA common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-4 chr1 125679836 125680066 + 0.332077462497413 NA intron (NM_027677, intron 1 of 1) intron (NM_027677, intron 1 of 1) 2955 NM_027677 71111 Mm.32727 NM_027677 ENSMUSG00000026343 Gpr39 4933415E13Rik G protein-coupled receptor 39 protein-coding common_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-10 chr12 85051531 85051760 + 0.332077462497413 NA intron (NM_001347421, intron 15 of 19) intron (NM_001347421, intron 15 of 19) 43970 NM_001361239 73422 Mm.311944 NM_175198 ENSMUSG00000042320 Prox2 1700058C01Rik prospero homeobox 2 protein-coding common_peak2_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-17 chr7 126695399 126695614 + 0.332077462497413 NA promoter-TSS (NM_175103) promoter-TSS (NM_175103) 277 NM_029420 75764 Mm.280573 NM_029420 ENSMUSG00000059772 Slx1b 1110030E23Rik|2410170E21Rik|4833422P03Rik|AI853643|Giyd1|Giyd2 SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-15 chr8 26963092 26963366 + 0.332077462497413 NA Intergenic Intergenic -14107 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding unique_peak1_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-5 chr4 130862551 130862795 + 0.332077462497413 NA Intergenic Intergenic -50661 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3|Stra13 lysosomal-associated protein transmembrane 5 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-8 chr2 91183083 91183291 + 0.332077462497413 NA promoter-TSS (NM_145527) promoter-TSS (NM_145527) -140 NM_145527 228355 Mm.36410 NM_145527 ENSMUSG00000040687 Madd 9630059K23Rik|IG20 MAP-kinase activating death domain protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-5 chr10 7210394 7210688 + 0.332077462497413 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 1696 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak2_15_15_-0.269959955782204_3.8650200221089_0.332077462497413-19 chr8 129263441 129263747 + 0.332077462497413 NA promoter-TSS (NR_144501) promoter-TSS (NR_144501) -36 NM_001346808 102635552 NM_001346808 Gm32856 - predicted gene, 32856 protein-coding unique_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-17 chr7 37850718 37850935 + 0.332077462497413 NA Intergenic Intergenic -81074 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_17_13_0.0914113061883448_3.85306057515178_0.332077462497413-16 chr8 77422835 77423103 + 0.332077462497413 NA intron (NM_030113, intron 5 of 22) intron (NM_030113, intron 5 of 22) -94087 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-9 chrX 109142614 109143022 + 0.332062764479303 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 47411 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-5 chr17 37270333 37270747 + 0.332062764479303 NA exon (NM_013819, exon 2 of 8) exon (NM_013819, exon 2 of 8) 306 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-2 chr11 86591157 86591666 + 0.332062764479303 NA intron (NM_001356531, intron 10 of 11) B1_Mur2|SINE|Alu -7253 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-6 chr6 57691477 57691997 + 0.332062764479303 NA intron (NM_025574, intron 1 of 1) CpG 341 NM_025574 66459 Mm.44201 NM_025574 ENSMUSG00000043162 Pyurf 2610022G08Rik|AI847956|Prey Pigy upstream reading frame protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303 chr10 59222201 59222788 + 0.332062764479303 NA promoter-TSS (NM_001024911) promoter-TSS (NM_001024911) 572 NM_172939 268301 Mm.3036 NM_172939 ENSMUSG00000098188 Sowahc 4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik sosondowah ankyrin repeat domain family member C protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-7 chr2 68982953 68983418 + 0.332062764479303 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 121744 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-10 chr5 36748210 36748612 + 0.332062764479303 NA exon (NM_133724, exon 1 of 1) exon (NM_133724, exon 1 of 1) 268 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-3 chr13 95616278 95616955 + 0.332062764479303 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 1850 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-4 chr2 68983000 68983417 + 0.332062764479303 NA intron (NM_001347161, intron 3 of 10) intron (NM_001347161, intron 3 of 10) 121767 NM_001347161 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-8 chr7 16042849 16043561 + 0.332062764479303 NA Intergenic Intergenic -28640 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-4 chr15 10981847 10982371 + 0.332062764479303 NA intron (NM_008537, intron 1 of 4) intron (NM_008537, intron 1 of 4) 353 NM_008537 17117 Mm.2787 NM_008537 ENSMUSG00000022244 Amacr Macr1 alpha-methylacyl-CoA racemase protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-9 chr5 36465181 36465523 + 0.332062764479303 NA promoter-TSS (NR_126488) promoter-TSS (NR_126488) 167 NM_024478 17713 Mm.21535 NM_024478 ENSMUSG00000029198 Grpel1 AA408748|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-3 chr11 70969617 70969921 + 0.332062764479303 NA promoter-TSS (NM_001252413) promoter-TSS (NM_001252413) 204 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-5 chr5 105799778 105800243 + 0.332062764479303 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -76558 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-6 chr2 26147360 26147716 + 0.332062764479303 NA Intergenic Intergenic -7032 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding unique_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303 chr5 123523563 123524097 + 0.332062764479303 NA intron (NM_023232, intron 1 of 5) CpG 334 NM_023232 66593 Mm.46716 NM_023232 ENSMUSG00000029433 Diablo 0610041G12Rik|1700006L01Rik|AU040403|Smac diablo, IAP-binding mitochondrial protein protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303 chr1 164457374 164457907 + 0.332062764479303 NA intron (NM_009721, intron 1 of 5) intron (NM_009721, intron 1 of 5) 715 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-7 chr6 91411021 91411644 + 0.332062764479303 NA promoter-TSS (NM_009527) promoter-TSS (NM_009527) 37 NM_009527 22421 Mm.56964 NM_009527 ENSMUSG00000030093 Wnt7a AI849442|Wnt-7a|px|tw wingless-type MMTV integration site family, member 7A protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-8 chr3 138142345 138142957 + 0.332062764479303 NA promoter-TSS (NM_001348196) promoter-TSS (NM_001348196) 767 NM_001355051 17777 Mm.2941 NM_008642 ENSMUSG00000028158 Mttp 1810043K16Rik|MTP microsomal triglyceride transfer protein protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-2 chr11 35956064 35956707 + 0.332062764479303 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 23704 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_39_30_0.0884456530115552_4.99841913689265_0.332062764479303-11 chr8 33653111 33653366 + 0.332062764479303 NA promoter-TSS (NM_010344) promoter-TSS (NM_010344) 0 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-8 chr19 17010451 17010979 + 0.332062764479297 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 54597 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-15 chr8 10534302 10534845 + 0.332062764479297 NA intron (NM_001319151, intron 28 of 34) intron (NM_001319151, intron 28 of 34) 347881 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-3 chr11 54906203 54906728 + 0.332062764479297 NA intron (NM_008161, intron 1 of 4) intron (NM_008161, intron 1 of 4) 3611 NM_008161 14778 Mm.200916 NM_008161 ENSMUSG00000018339 Gpx3 AA960521|EGPx|GPx|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding common_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-3 chr2 75685882 75686241 + 0.332062764479297 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 18602 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-13 chr6 100287743 100288097 + 0.332062764479297 NA promoter-TSS (NM_019743) promoter-TSS (NM_019743) -562 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-2 chr19 56990886 56991198 + 0.332062764479297 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 17533 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-10 chr3 37886041 37886396 + 0.332062764479297 NA Intergenic Intergenic -12595 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297 chr1 150392816 150393167 + 0.332062764479297 NA promoter-TSS (NM_145511) promoter-TSS (NM_145511) 64 NM_001077237 226499 Mm.222093 NM_145511 ENSMUSG00000006010 BC003331 1810053E15Rik|Odr4|odr-4 cDNA sequence BC003331 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-2 chr10 116268577 116269043 + 0.332062764479297 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -32564 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-6 chr7 112289601 112289978 + 0.332062764479297 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 63953 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-4 chr3 37846226 37846600 + 0.332062764479297 NA Intergenic Intergenic -52400 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-12 chr3 121644520 121645172 + 0.332062764479297 NA intron (NR_036458, intron 1 of 2) ID_B1|SINE|B4 -1361 NR_036457 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297 chr9 57246891 57247220 + 0.332062764479297 NA intron (NM_001014398, intron 8 of 12) intron (NM_001014398, intron 8 of 12) 10499 NM_001014398 541610 Mm.378036 NM_001014398 ENSMUSG00000070298 Trcg1 - taste receptor cell gene 1 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-5 chr13 104228325 104228814 + 0.332062764479297 NA promoter-TSS (NM_021790) promoter-TSS (NM_021790) -42 NM_181061 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-4 chr12 77970370 77970898 + 0.332062764479297 NA Intergenic Intergenic -256021 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-6 chr17 36257449 36257826 + 0.332062764479297 NA exon (NM_026308, exon 2 of 5) exon (NM_026308, exon 2 of 5) 209 NM_026308 67676 Mm.27131 NM_026308 ENSMUSG00000024446 Rpp21 0610037N01Rik ribonuclease P 21 subunit protein-coding common_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-5 chr5 135023638 135024265 + 0.332062764479297 NA intron (NM_001359179, intron 1 of 8) CpG 469 NR_133683 20907 Mm.6225 NM_016801 ENSMUSG00000007207 Stx1a HPC-1 syntaxin 1A (brain) protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-14 chr7 28311449 28311948 + 0.332062764479297 NA intron (NM_025616, intron 1 of 10) intron (NM_025616, intron 1 of 10) 348 NM_025616 66525 Mm.167913 NM_025616 ENSMUSG00000003438 Timm50 2810403L02Rik|AU015082|TIM50L translocase of inner mitochondrial membrane 50 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-16 chr9 21955587 21955995 + 0.332062764479297 NA promoter-TSS (NM_025870) promoter-TSS (NM_025870) 38 NM_025870 66962 Mm.46647 NM_025870 ENSMUSG00000051238 Swsap1 2310047B19Rik SWIM type zinc finger 7 associated protein 1 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-7 chr18 65745276 65745679 + 0.332062764479297 NA intron (NM_177028, intron 12 of 14) intron (NM_177028, intron 12 of 14) 47209 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak1_35_33_-0.195751592577635_4.98958704496152_0.332062764479297 chr13 91650698 91651083 + 0.332062764479297 NA intron (NM_001360775, intron 5 of 16) intron (NM_001360775, intron 5 of 16) -90631 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-9 chr2 61294965 61295366 + 0.332062764479297 NA Intergenic Intergenic -283421 NM_011529 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak2_35_33_-0.195751592577635_4.98958704496152_0.332062764479297-11 chr3 38277551 38278148 + 0.332062764479297 NA Intergenic L2|LINE|L2 -69730 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak1_70_54_0.0832610281820712_5.8229902276157_0.332057628060234-3 chr2 119156079 119156994 + 0.332057628060234 NA exon (NM_001033136, exon 2 of 13) exon (NM_001033136, exon 2 of 13) 498 NM_001033136 67809 Mm.475909 NM_001033136 ENSMUSG00000070730 Rmdn3 1200015F23Rik|AI131757|Fam82a2|Ptpip51|RMD-3|Rmd3 regulator of microtubule dynamics 3 protein-coding common_peak2_70_54_0.0832610281820712_5.8229902276157_0.332057628060234 chr11 97800299 97801243 + 0.332057628060234 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 1206 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_70_54_0.0832610281820712_5.8229902276157_0.332057628060234-2 chr16 32859527 32860611 + 0.332057628060234 NA intron (NM_172615, intron 1 of 18) B4|SINE|B4 8297 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak2_65_58_-0.122632044537327_5.82132702709318_0.332057628060234 chr1 64808539 64809734 + 0.332057628060234 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -71386 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_65_58_-0.122632044537327_5.82132702709318_0.332057628060234 chr5 138085092 138085540 + 0.332057628060234 NA intron (NM_029869, intron 1 of 3) intron (NM_029869, intron 1 of 3) 232 NM_029869 74570 Mm.213114 NM_029869 ENSMUSG00000029729 Zkscan1 5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139 zinc finger with KRAB and SCAN domains 1 protein-coding common_peak2_70_54_0.0832610281820712_5.8229902276157_0.332057628060234-3 chr8 26158223 26158518 + 0.332057628060234 NA 5' UTR (NM_199042, exon 1 of 3) 5' UTR (NM_199042, exon 1 of 3) 201 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_70_54_0.0832610281820712_5.8229902276157_0.332057628060234-4 chr7 110768331 110769225 + 0.332057628060234 NA intron (NM_001276301, intron 1 of 14) CpG 572 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_70_54_0.0832610281820712_5.8229902276157_0.332057628060234 chr10 19167327 19168274 + 0.332057628060234 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 562 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_70_54_0.0832610281820712_5.8229902276157_0.332057628060234-2 chr5 123014996 123015745 + 0.332057628060234 NA exon (NM_175423, exon 1 of 2) exon (NM_175423, exon 1 of 2) 296 NM_175423 109305 Mm.218582 NM_175423 ENSMUSG00000049686 Orai1 D730049H07Rik|Tmem142a|orai-1 ORAI calcium release-activated calcium modulator 1 protein-coding common_peak2_109_85_0.0655125670755963_6.4590210382399_0.332055252013222-2 chr3 145632718 145633799 + 0.332055252013222 NA Intergenic Intergenic 16727 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_109_85_0.0655125670755963_6.4590210382399_0.332055252013222 chr2 27425409 27427028 + 0.332055252013222 NA intron (NM_009500, intron 1 of 27) CpG 1390 NR_133905 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding common_peak1_103_90_-0.0963664248900722_6.45961142775366_0.332055252013198-2 chr17 33684689 33685380 + 0.332055252013198 NA TTS (NM_145486) TTS (NM_145486) 424 NM_001109913 76936 Mm.311439 NM_029804 ENSMUSG00000059208 Hnrnpm 2610023M21Rik|AA409009|Hnrpm|mKIAA4193 heterogeneous nuclear ribonucleoprotein M protein-coding common_peak2_103_90_-0.0963664248900722_6.45961142775366_0.332055252013198 chr4 108832862 108834042 + 0.332055252013198 NA intron (NM_001356361, intron 1 of 5) CpG 188 NM_027453 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding common_peak1_103_90_-0.0963664248900722_6.45961142775366_0.332055252013198 chr15 79658878 79659481 + 0.332055252013198 NA promoter-TSS (NM_029407) promoter-TSS (NM_029407) -48 NM_028634 73739 Mm.294441 NM_028634 ENSMUSG00000022428 Cby1 1110014P06Rik|CBY|PGEA14|Pgea1|arb1 chibby family member 1, beta catenin antagonist protein-coding common_peak2_150_129_-0.0767699087714151_6.98398285864275_0.332053961687138 chr1 131239122 131240655 + 0.332053961687138 NA intron (NM_018750, intron 1 of 5) intron (NM_018750, intron 1 of 5) 5290 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_269_228_-0.0611099975893925_7.80864878930225_0.33205267894795 chr11 31552041 31555225 + 0.33205267894795 NA Intergenic Intergenic 118229 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_215_169_0.049045955615969_7.43391391394569_0.331873314459007 chr9 87729368 87730879 + 0.331873314459007 NA intron (NM_023814, intron 1 of 7) CpG 1137 NM_023814 76365 Mm.158789 NM_023814 ENSMUSG00000032419 Tbx18 2810012F10Rik|2810404D13Rik T-box18 protein-coding common_peak2_151_130_-0.0783695061387917_6.99423824846805_0.331809632856884 chr8 121950755 121951593 + 0.331809632856884 NA intron (NM_016812, intron 1 of 13) CpG 682 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_151_130_-0.0783695061387917_6.99423824846805_0.331809632856884 chr11 120990163 120991388 + 0.331809632856884 NA intron (NM_027874, intron 1 of 9) CpG 558 NM_139059 104318 Mm.216227 NM_027874 ENSMUSG00000025162 Csnk1d 1200006A05Rik|AA409348|D930010H05Rik casein kinase 1, delta protein-coding common_peak2_158_124_0.0537663932619843_6.99266748129308_0.331809632856884 chr3 96245016 96246426 + 0.331809632856884 NA promoter-TSS (NM_178216).2 promoter-TSS (NM_178216).2 224 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_104_91_-0.0984253408569984_6.47434928562851_0.33170459031519-2 chr8 122576099 122576908 + 0.33170459031519 NA intron (NM_009698, intron 2 of 4) CpG 404 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding common_peak1_110_86_0.061797867862925_6.47384242978019_0.33170459031519-2 chr6 34610243 34611347 + 0.33170459031519 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 12291 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_104_91_-0.0984253408569984_6.47434928562851_0.33170459031519-2 chr18 54986867 54988655 + 0.33170459031519 NA exon (NM_175751, exon 2 of 10) exon (NM_175751, exon 2 of 10) 2419 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_104_91_-0.0984253408569984_6.47434928562851_0.33170459031519 chr15 66895853 66897093 + 0.33170459031519 NA intron (NM_018865, intron 1 of 4) intron (NM_018865, intron 1 of 4) 5080 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_110_86_0.061797867862925_6.47384242978019_0.33170459031519 chr8 34107758 34108829 + 0.33170459031519 NA promoter-TSS (NM_001293758) promoter-TSS (NM_001293758) 419 NM_001293759 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_104_91_-0.0984253408569984_6.47434928562851_0.33170459031519 chr11 46437051 46437824 + 0.33170459031519 NA intron (NM_001104556, intron 1 of 1) CpG 476 NM_025426 66213 Mm.24159 NM_025426 ENSMUSG00000020397 Med7 1110063B05Rik|Crsp33|Crsp9 mediator complex subunit 7 protein-coding common_peak1_110_86_0.061797867862925_6.47384242978019_0.33170459031519 chr15 51805050 51806301 + 0.33170459031519 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 59786 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_160_125_0.0601774482972228_7.00736864764853_0.331569122721874 chr10 95515139 95516052 + 0.331569122721874 NA intron (NM_080560, intron 1 of 3) CpG 433 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding common_peak2_159_125_0.0512520807520254_7.00290596387593_0.331569122721874 chr15 99972467 99973438 + 0.331569122721874 NA non-coding (NR_028124, exon 1 of 1) non-coding (NR_028124, exon 1 of 1) 172 NM_001284523 207214 Mm.28811 NM_001024526 ENSMUSG00000023025 Larp4 DXErtd793|DXErtd793e La ribonucleoprotein domain family, member 4 protein-coding common_peak2_152_131_-0.0799470371403359_7.00442060078829_0.331569122721874 chr8 70509909 70511061 + 0.331569122721874 NA promoter-TSS (NM_001348229) promoter-TSS (NM_001348229) -1 NR_151735 78183 Mm.297372 NR_151735 4930522P08Rik - RIKEN cDNA 4930522P08 gene ncRNA common_peak2_209_178_-0.0657341416374866_7.45094870644551_0.331519761681117 chr4 148626101 148627088 + 0.331519761681117 NA intron (NM_001003898, intron 1 of 6) CpG 402 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding common_peak2_218_171_0.0519313035180389_7.45223040646112_0.331519761681068-2 chr17 87849778 87851466 + 0.331519761681068 NA Intergenic Intergenic -52628 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_218_171_0.0519313035180389_7.45223040646112_0.331519761681068 chr16 31591707 31593400 + 0.331519761681068 NA Intergenic Intergenic -25580 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_71_55_0.0773013470418569_5.84600559557853_0.331513058069923 chr6 66896465 66897426 + 0.331513058069923 NA promoter-TSS (NM_001177558) promoter-TSS (NM_001177558) 54 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak2_66_59_-0.125337577968131_5.84422180662445_0.331513058069911-4 chr8 119394913 119395561 + 0.331513058069911 NA exon (NM_019966, exon 1 of 5) exon (NM_019966, exon 1 of 5) 345 NM_019966 56690 Mm.423037 NM_019966 ENSMUSG00000074064 Mlycd AI324784|Mcd malonyl-CoA decarboxylase protein-coding common_peak2_66_59_-0.125337577968131_5.84422180662445_0.331513058069911-5 chrX 143344793 143345712 + 0.331513058069911 NA intron (NM_001358592, intron 4 of 11) intron (NM_001358592, intron 4 of 11) 49010 NM_001358592 83453 Mm.157697 NM_031258 ENSMUSG00000031283 Chrdl1 CHL|CHL1|Nrln1|VOPT chordin-like 1 protein-coding common_peak1_66_59_-0.125337577968131_5.84422180662445_0.331513058069911-2 chr6 34713541 34714183 + 0.331513058069911 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 4418 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_66_59_-0.125337577968131_5.84422180662445_0.331513058069911-2 chr4 11253477 11254196 + 0.331513058069911 NA intron (NM_001159595, intron 1 of 26) CpG 423 NM_178112 72656 Mm.246713 NM_178112 ENSMUSG00000040738 Ints8 2810013E07Rik|AV063769|D130008D20Rik integrator complex subunit 8 protein-coding common_peak2_66_59_-0.125337577968131_5.84422180662445_0.331513058069911 chr2 131509679 131510601 + 0.331513058069911 NA intron (NM_001177840, intron 1 of 3) G-rich|Low_complexity|Low_complexity 18278 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak2_66_59_-0.125337577968131_5.84422180662445_0.331513058069911-3 chr5 65434726 65435750 + 0.331513058069911 NA intron (NM_009466, intron 1 of 11) intron (NM_009466, intron 1 of 11) 604 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak1_66_59_-0.125337577968131_5.84422180662445_0.331513058069911 chr15 27419061 27420057 + 0.331513058069911 NA Intergenic Intergenic -47118 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_274_232_-0.0598069036959519_7.8342826928063_0.331508364998141 chr19 29521676 29523421 + 0.331508364998141 NA promoter-TSS (NR_015567) promoter-TSS (NR_015567) 266 NM_001081319 226089 Mm.353838 NM_177641 ENSMUSG00000038658 Ric1 C030046E11Rik|C130057E09Rik|Kiaa1432 RAB6A GEF complex partner 1 protein-coding common_peak1_105_92_-0.100443735411415_6.48893694340232_0.331361767726665 chr15 59784149 59785263 + 0.331361767726665 NA Intergenic MIRb|SINE|MIR 10253 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_112_87_0.0708910830229543_6.49487716014877_0.331361767726616-2 chr13 94057465 94059122 + 0.331361767726616 NA intron (NM_172589, intron 1 of 3) intron (NM_172589, intron 1 of 3) 497 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_112_87_0.0708910830229543_6.49487716014877_0.331361767726616 chr1 43147798 43149606 + 0.331361767726616 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 15259 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_112_87_0.0708910830229543_6.49487716014877_0.331361767726616 chr7 66374986 66375779 + 0.331361767726616 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 6342 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_111_87_0.0581575160081389_6.48851037664137_0.331361767726616 chr5 93130406 93131504 + 0.331361767726616 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 37539 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_210_179_-0.0669661421710384_7.45837002524416_0.331346007716337 chr8 25596536 25598058 + 0.331346007716337 NA 5' UTR (NM_173012, exon 1 of 11) 5' UTR (NM_173012, exon 1 of 11) 190 NM_173012 270035 Mm.268349 NM_173012 ENSMUSG00000037363 Letm2 6030453H13|D030041N04Rik leucine zipper-EF-hand containing transmembrane protein 2 protein-coding common_peak2_220_173_0.048275532578554_7.467081262138_0.33117422302463 chr2 24473290 24475417 + 0.33117422302463 NA intron (NM_011040, intron 2 of 11) CpG 1246 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-5 chr16 23423033 23423638 + 0.331107220336282 NA Intergenic Intergenic -5798 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-2 chr12 80270503 80270986 + 0.331107220336282 NA Intergenic Intergenic -10363 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282 chr9 92275883 92276394 + 0.331107220336282 NA intron (NM_001195084, intron 1 of 7) intron (NM_001195084, intron 1 of 7) 536 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-8 chr9 88522174 88522778 + 0.331107220336282 NA intron (NR_040721, intron 1 of 4) intron (NR_040721, intron 1 of 4) 421 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak1_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-2 chr11 3289699 3290093 + 0.331107220336282 NA promoter-TSS (NM_001253691) promoter-TSS (NM_001253691) -561 NM_001253690 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-10 chr7 30232011 30232505 + 0.331107220336282 NA promoter-TSS (NM_001360648) promoter-TSS (NM_001360648) -61 NM_025548 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-5 chr19 34253746 34254016 + 0.331107220336282 NA intron (NM_007392, intron 1 of 8) intron (NM_007392, intron 1 of 8) 1492 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282 chr1 137900002 137900814 + 0.331107220336282 NA Intergenic Intergenic -66047 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-7 chr19 28242986 28243515 + 0.331107220336282 NA Intergenic Intergenic -232084 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-6 chr2 26118808 26119186 + 0.331107220336282 NA intron (NM_026495, intron 1 of 5) intron (NM_026495, intron 1 of 5) 3814 NM_026495 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-11 chr7 133637165 133637453 + 0.331107220336282 NA promoter-TSS (NM_178115) promoter-TSS (NM_178115) -366 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-3 chr13 13590476 13590926 + 0.331107220336282 NA intron (NM_010748, intron 1 of 52) CpG 292 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282 chr1 152793932 152794373 + 0.331107220336282 NA Intergenic B2_Mm2|SINE|B2 -6001 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-3 chr16 93292495 93292979 + 0.331107220336282 NA Intergenic Intergenic 60452 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-9 chr5 113628835 113629343 + 0.331107220336282 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 14514 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-4 chr3 30792622 30793072 + 0.331107220336282 NA promoter-TSS (NM_027016) promoter-TSS (NM_027016) -29 NM_027016 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak1_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-5 chr19 46338254 46338593 + 0.331107220336282 NA intron (NM_001164290, intron 1 of 9) CpG 237 NM_001164294 67116 Mm.218848 NM_024192 ENSMUSG00000036748 Cuedc2 3010002G01Rik CUE domain containing 2 protein-coding common_peak1_37_34_-0.160119562399819_5.04922323574506_0.331107220336282 chr1 92910853 92911535 + 0.331107220336282 NA promoter-TSS (NR_138577) promoter-TSS (NR_138577) 369 NM_181405 108657 Mm.200971 NM_181405 ENSMUSG00000026269 Rnpepl1 1110014H17Rik|AI894167 arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding common_peak1_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-6 chr4 89038324 89038879 + 0.331107220336282 NA Intergenic Intergenic -11706 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-6 chr17 25773891 25774359 + 0.331107220336282 NA intron (NM_026238, intron 1 of 10) intron (NM_026238, intron 1 of 10) 349 NM_026238 67563 Mm.24201 NM_026238 ENSMUSG00000002280 Narfl 9030612I22Rik|AI504405|PRN nuclear prelamin A recognition factor-like protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-7 chr6 82908383 82908884 + 0.331107220336282 NA Intergenic Intergenic -26780 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak1_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-2 chr11 54906189 54906748 + 0.331107220336282 NA intron (NM_008161, intron 1 of 4) intron (NM_008161, intron 1 of 4) 3614 NM_008161 14778 Mm.200916 NM_008161 ENSMUSG00000018339 Gpx3 AA960521|EGPx|GPx|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-2 chr11 80489794 80490294 + 0.331107220336282 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) 13021 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding common_peak1_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-4 chr17 88597781 88598237 + 0.331107220336282 NA Intergenic Intergenic -28546 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-8 chr3 57502896 57503589 + 0.331107220336282 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 72634 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-3 chr13 38204963 38205447 + 0.331107220336282 NA intron (NM_026382, intron 1 of 8) CpG 266 NM_026382 67797 Mm.250783 NM_026382 ENSMUSG00000021431 Snrnp48 1110050F08Rik|6530403A03Rik|C6orf151 small nuclear ribonucleoprotein 48 (U11/U12) protein-coding common_peak1_36_34_-0.198322275887524_5.0301218790012_0.331107220336282 chr10 111576543 111576879 + 0.331107220336282 NA Intergenic Intergenic 17562 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-4 chr19 17385792 17386433 + 0.331107220336282 NA Intergenic Intergenic -7931 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-3 chr13 41706099 41706499 + 0.331107220336282 NA Intergenic Intergenic 100083 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-4 chr15 6256542 6257154 + 0.331107220336282 NA Intergenic Intergenic -42941 NM_001008702 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_37_34_-0.160119562399819_5.04922323574506_0.331107220336282-9 chr9 95749746 95750226 + 0.331107220336282 NA 5' UTR (NM_001311123, exon 1 of 12) 5' UTR (NM_001311123, exon 1 of 12) 372 NM_001311123 22063 Mm.149633 NM_011643 ENSMUSG00000032839 Trpc1 Mtrp1|Trp1|Trrp1 transient receptor potential cation channel, subfamily C, member 1 protein-coding common_peak2_36_34_-0.198322275887524_5.0301218790012_0.331107220336282-12 chr9 59617497 59617954 + 0.331107220336282 NA intron (NM_001205239, intron 1 of 23) CpG 441 NR_038074 67287 Mm.439943 NM_029922 ENSMUSG00000025237 Parp6 1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6 poly (ADP-ribose) polymerase family, member 6 protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-6 chr16 31663273 31663667 + 0.33110722033627 NA promoter-TSS (NM_001252435) promoter-TSS (NM_001252435) 27 NM_001252435 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs large MAGUK scaffold protein 1 protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-9 chr9 44267787 44268174 + 0.33110722033627 NA 5' UTR (NM_001163743, exon 1 of 10) 5' UTR (NM_001163743, exon 1 of 10) 207 NM_001163743 270151 Mm.3957 NM_178420 ENSMUSG00000032109 Nlrx1 BC034204|NOD9 NLR family member X1 protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-4 chr13 113551182 113551953 + 0.33110722033627 NA Intergenic Intergenic -48723 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627 chr10 77206966 77207581 + 0.33110722033627 NA Intergenic Intergenic -40743 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-4 chr6 108445389 108445883 + 0.33110722033627 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -44107 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-6 chr8 61311034 61311253 + 0.33110722033627 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -22271 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-7 chr2 146027053 146027639 + 0.33110722033627 NA Intergenic Intergenic 92562 NM_175280 78774 Mm.136347 NM_175280 ENSMUSG00000037143 Cfap61 4930529M08Rik|BB178539|BC024760 cilia and flagella associated protein 61 protein-coding common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-5 chr7 111122888 111123347 + 0.33110722033627 NA promoter-TSS (NR_015573) promoter-TSS (NR_015573) -442 NR_015573 75479 Mm.381620 NR_015573 ENSMUSG00000110424 1700012D14Rik - RIKEN cDNA 1700012D14 gene ncRNA common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-7 chr8 90955320 90955744 + 0.33110722033627 NA intron (NM_177224, intron 3 of 39) intron (NM_177224, intron 3 of 39) 23283 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-2 chr12 79541779 79542676 + 0.33110722033627 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 244876 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-2 chr14 27069335 27069812 + 0.33110722033627 NA intron (NM_134437, intron 1 of 12) intron (NM_134437, intron 1 of 12) 30572 NM_134437 171463 Mm.206726 NM_027265 ENSMUSG00000040717 Il17rd 2810004A10Rik|AI428510|Sef|Sef-S interleukin 17 receptor D protein-coding common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627 chr12 80435083 80435572 + 0.33110722033627 NA intron (NM_177267, intron 1 of 8) CpG 1274 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak2_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-3 chr3 144664496 144664840 + 0.33110722033627 NA Intergenic Intergenic 55667 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627 chr11 78037951 78038353 + 0.33110722033627 NA TTS (NM_183286) TTS (NM_183286) 211 NM_008028 14252 Mm.130227 NM_008028 ENSMUSG00000061981 Flot2 AI573412|Esa|reggie-2 flotillin 2 protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-5 chr13 114387449 114387977 + 0.33110722033627 NA intron (NM_010887, intron 1 of 4) intron (NM_010887, intron 1 of 4) 381 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-8 chr5 30231908 30232408 + 0.33110722033627 NA promoter-TSS (NR_137634) promoter-TSS (NR_137634) -423 NM_027652 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak1_40_31_0.0780145471736819_5.03900727358684_0.33110722033627-3 chr13 21362911 21363635 + 0.33110722033627 NA intron (NM_016684, intron 1 of 3) intron (NM_016684, intron 1 of 3) 453 NM_016684 22758 Mm.24124 NM_016684 ENSMUSG00000036721 Zscan12 2510038J07Rik|FPM315|Zfp96|mKIAA0426|zfp-96 zinc finger and SCAN domain containing 12 protein-coding common_peak2_155_133_-0.073825372921692_7.02917650399693_0.33109920591533-2 chr9 98275436 98276442 + 0.33109920591533 NA Intergenic Intergenic -20631 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_154_133_-0.0830377317243558_7.02457032459559_0.33109920591533 chr11 51605600 51607476 + 0.33109920591533 NA exon (NM_010448, exon 2 of 7) exon (NM_010448, exon 2 of 7) 343 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding common_peak2_155_133_-0.073825372921692_7.02917650399693_0.33109920591533 chr10 59899941 59901952 + 0.33109920591533 NA Intergenic Intergenic 21355 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_162_127_0.0551429897244242_7.02757149486221_0.33109920591533 chr8 61487685 61488393 + 0.33109920591533 NA intron (NM_145595, intron 1 of 4) CpG 305 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak2_107_93_-0.0890969803507229_6.51004036150228_0.331026524252985 chr10 43688823 43689985 + 0.331026524252985 NA Intergenic Intergenic -56754 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak1_107_93_-0.0890969803507229_6.51004036150228_0.331026524252985 chr18 80255297 80256664 + 0.331026524252985 NA promoter-TSS (NM_001164424) promoter-TSS (NM_001164424) -246 NM_001164424 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding common_peak2_113_88_0.0672106462329589_6.50933875408288_0.33102652425296 chr19 53555635 53556264 + 0.33102652425296 NA Intergenic Intergenic 26631 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_113_88_0.0672106462329589_6.50933875408288_0.33102652425296 chr4 133583610 133584968 + 0.33102652425296 NA promoter-TSS (NM_133884) promoter-TSS (NM_133884) -84 NM_001290742 100210 Mm.274001 NM_133884 ENSMUSG00000028848 Gpn2 AI838661|Atpbd1b|R74630 GPN-loop GTPase 2 protein-coding common_peak2_67_60_-0.127961459799679_5.86675660766305_0.330987277729107 chr4 155831732 155832372 + 0.330987277729107 NA exon (NM_025338, exon 2 of 4) exon (NM_025338, exon 2 of 4) 783 NM_025338 66077 Mm.28999 NM_025338 ENSMUSG00000065990 Aurkaip1 0610033H09Rik|Aip|Akip|MRP-S38 aurora kinase A interacting protein 1 protein-coding common_peak1_67_60_-0.127961459799679_5.86675660766305_0.330987277729107 chr1 120120190 120121092 + 0.330987277729107 NA promoter-TSS (NM_001172074) promoter-TSS (NM_001172074) 278 NM_001037999 13167 Mm.2785 NM_007830 ENSMUSG00000026385 Dbi ACBD1|Acbp|EP|endozepine diazepam binding inhibitor protein-coding common_peak2_67_60_-0.127961459799679_5.86675660766305_0.330987277729107-2 chrX 99136478 99137856 + 0.330987277729107 NA intron (NM_010110, intron 1 of 4) CpG 1106 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding common_peak1_72_56_0.0715254214011853_5.86865272486533_0.330987277729095 chr4 137593733 137594066 + 0.330987277729095 NA promoter-TSS (NM_001347227) promoter-TSS (NM_001347227) -273 NM_001347227 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_72_56_0.0715254214011853_5.86865272486533_0.330987277729095 chr17 26584910 26585443 + 0.330987277729095 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 23664 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_72_56_0.0715254214011853_5.86865272486533_0.330987277729095-2 chr17 56764780 56765217 + 0.330987277729095 NA intron (NM_001360405, intron 1 of 11) CpG 247 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak2_163_128_0.05267733260394_7.03756592172522_0.330869629665098 chr8 31819691 31821489 + 0.330869629665098 NA intron (NM_178591, intron 8 of 8) intron (NM_178591, intron 8 of 8) 97613 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_156_134_-0.0753982860264246_7.03911645403762_0.330869629665098 chr4 63050780 63052346 + 0.330869629665098 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 85989 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_156_134_-0.0753982860264246_7.03911645403762_0.330869629665098 chr14 31204967 31206755 + 0.330869629665098 NA intron (NM_001347583, intron 1 of 13) intron (NM_001347583, intron 1 of 13) 965 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1|edsn nischarin protein-coding common_peak1_114_89_0.0636021246472138_6.52365415865328_0.330698611272864-2 chr15 12205111 12206123 + 0.330698611272864 NA intron (NM_001356498, intron 1 of 15) CpG 589 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_114_89_0.0636021246472138_6.52365415865328_0.330698611272864 chr1 80339479 80340618 + 0.330698611272864 NA intron (NM_016716, intron 1 of 15) GC_rich|Low_complexity|Low_complexity 642 NM_001313728 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak2_108_94_-0.0911607232025018_6.5242752467297_0.330698611272839 chr4 152477666 152478654 + 0.330698611272839 NA promoter-TSS (NM_001355173) promoter-TSS (NM_001355173) 18 NM_153424 260305 Mm.302496 NM_153424 ENSMUSG00000039577 Nphp4 4930564O18Rik|nmf192 nephronophthisis 4 (juvenile) homolog (human) protein-coding common_peak2_215_183_-0.0651250643033423_7.49099942390534_0.330670355375681 chr12 86801522 86803247 + 0.330670355375681 NA Intergenic Intergenic 68015 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_215_183_-0.0651250643033423_7.49099942390534_0.330670355375681 chr5 90365011 90367457 + 0.330670355375681 NA promoter-TSS (NM_030886) promoter-TSS (NM_030886) -49 NM_198010 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding common_peak1_165_129_0.0589008282892198_7.05181822717306_0.330643532748592 chr4 141721612 141723338 + 0.330643532748592 NA intron (NM_001017966, intron 1 of 9) intron (NM_001017966, intron 1 of 9) 944 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak1_164_129_0.0502451109766957_7.0474903685168_0.330643532748592 chr8 117280791 117282754 + 0.330643532748592 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 24753 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_69_61_-0.109895297414316_5.89924866167972_0.330479330879757-2 chr8 117282275 117282716 + 0.330479330879757 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 25476 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_69_61_-0.109895297414316_5.89924866167972_0.330479330879757 chr5 53590397 53591449 + 0.330479330879757 NA intron (NM_001359152, intron 1 of 9) (CGGGG)n|Simple_repeat|Simple_repeat 437 NM_001080927 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_68_61_-0.130507406363166_5.88894260720529_0.330479330879757 chr19 4476844 4477540 + 0.330479330879757 NA promoter-TSS (NM_134164) promoter-TSS (NM_134164) -49 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak1_69_61_-0.109895297414316_5.89924866167972_0.330479330879757 chr8 108764038 108764581 + 0.330479330879757 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 49665 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_68_61_-0.130507406363166_5.88894260720529_0.330479330879757-2 chr11 48991642 48992668 + 0.330479330879757 NA promoter-TSS (NM_011579) promoter-TSS (NM_011579) 91 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak1_68_61_-0.130507406363166_5.88894260720529_0.330479330879757 chr11 5901261 5902092 + 0.330479330879757 NA exon (NM_010292, exon 10 of 10) exon (NM_010292, exon 10 of 10) -2894 NM_022879 17898 Mm.46514 NM_022879 ENSMUSG00000020469 Myl7 MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A myosin, light polypeptide 7, regulatory protein-coding common_peak1_73_57_0.065924766356626_5.89094337830588_0.330479330879733-2 chr8 111853807 111854296 + 0.330479330879733 NA intron (NM_011801, intron 1 of 6) CpG 259 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding common_peak2_73_57_0.065924766356626_5.89094337830588_0.330479330879733 chr17 29459848 29460539 + 0.330479330879733 NA Intergenic MIRb|SINE|MIR -30852 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_73_57_0.065924766356626_5.89094337830588_0.330479330879733 chr4 43957879 43958661 + 0.330479330879733 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 568 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak2_73_57_0.065924766356626_5.89094337830588_0.330479330879733-2 chr5 151189784 151190436 + 0.330479330879733 NA promoter-TSS (NM_001163493) promoter-TSS (NM_001163493) 83 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding unique_peak1_73_57_0.065924766356626_5.89094337830588_0.330479330879733 chr8 94323147 94324183 + 0.330479330879733 NA promoter-TSS (NR_029552) promoter-TSS (NR_029552) -646 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak2_295_232_0.0456096576834284_7.88699097349599_0.330475099247938 chr11 60105031 60107237 + 0.330475099247938 NA intron (NM_009021, intron 1 of 5) CpG 1121 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_158_136_-0.0784814050364551_7.0587913804423_0.330420836657522 chr3 9752155 9754033 + 0.330420836657522 NA intron (NM_053182, intron 1 of 7) intron (NM_053182, intron 1 of 7) 80585 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak2_109_95_-0.0931851789434619_6.53836991124943_0.330377790922753 chr8 77517067 77517892 + 0.330377790922753 NA non-coding (NR_028125, exon 1 of 1) non-coding (NR_028125, exon 1 of 1) 423 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_115_90_0.0600634016053254_6.53782634100136_0.330377790922728 chr17 80061166 80062272 + 0.330377790922728 NA exon (NM_144802, exon 1 of 13) exon (NM_144802, exon 1 of 13) 549 NR_152119 72692 Mm.64579 NM_144802 ENSMUSG00000024095 Hnrnpll 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll heterogeneous nuclear ribonucleoprotein L-like protein-coding common_peak2_115_90_0.0600634016053254_6.53782634100136_0.330377790922728-2 chr6 65778623 65779844 + 0.330377790922728 NA intron (NM_029549, intron 1 of 10) CpG 271 NM_029549 70779 Mm.263355 NM_027547 ENSMUSG00000029913 Prdm5 4432417F03Rik|6530401I24Rik|AI197291|E130112L17Rik|PFM2 PR domain containing 5 protein-coding common_peak2_115_90_0.0600634016053254_6.53782634100136_0.330377790922728 chr1 91455373 91456565 + 0.330377790922728 NA intron (NM_011066, intron 1 of 22) intron (NM_011066, intron 1 of 22) 3359 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak2_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-5 chr17 88628583 88629000 + 0.330208782692001 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 2236 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-4 chr13 112801442 112802078 + 0.330208782692001 NA intron (NM_008903, intron 1 of 5) intron (NM_008903, intron 1 of 5) 983 NM_008247 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001-6 chr2 80314537 80315210 + 0.330208782692001 NA promoter-TSS (NM_024181) promoter-TSS (NM_024181) -593 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak1_38_35_-0.163551224759743_5.08814938906244_0.330208782692001 chr1 40445583 40446270 + 0.330208782692001 NA intron (NM_001025602, intron 6 of 10) intron (NM_001025602, intron 6 of 10) 6297 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-5 chr8 105289288 105289740 + 0.330208782692001 NA promoter-TSS (NM_001166394) promoter-TSS (NM_001166394) 14 NM_001166394 74356 Mm.204876 NM_028888 ENSMUSG00000014837 4931428F04Rik AI426165|Kiaa0895l RIKEN cDNA 4931428F04 gene protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001 chr10 24572156 24572702 + 0.330208782692001 NA Intergenic L2a|LINE|L2 -23013 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-12 chr8 60982693 60983222 + 0.330208782692001 NA 5' UTR (NM_007711, exon 1 of 12) 5' UTR (NM_007711, exon 1 of 12) 354 NM_173873 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding unique_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001 chr15 38473371 38473770 + 0.330208782692001 NA Intergenic CpG 16977 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-15 chr8 125734238 125734660 + 0.330208782692001 NA intron (NM_025636, intron 1 of 4) CpG 246 NM_001310688 66566 Mm.25296 NM_025636 ENSMUSG00000031851 Ntpcr 2310079N02Rik|AI449709 nucleoside-triphosphatase, cancer-related protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-10 chr4 127334952 127335374 + 0.330208782692001 NA Intergenic Intergenic -4327 NM_001160012 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-10 chr4 43972596 43973103 + 0.330208782692001 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -10655 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001-2 chr16 14158715 14159111 + 0.330208782692001 NA promoter-TSS (NR_030252) promoter-TSS (NR_030252) 361 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis regulator and mRNA stability 1 protein-coding unique_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001 chr17 49455680 49456281 + 0.330208782692001 NA TTS (NM_028464) TTS (NM_028464) 27616 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-7 chr17 80797530 80798255 + 0.330208782692001 NA Intergenic Intergenic -69867 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001 chr13 98680055 98680422 + 0.330208782692001 NA Intergenic Intergenic 14593 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-11 chr6 33059666 33060178 + 0.330208782692001 NA intron (NM_001355667, intron 1 of 8) CpG 338 NM_001355667 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-7 chr16 93095707 93096249 + 0.330208782692001 NA Intergenic Intergenic 257211 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-6 chr2 104028049 104028403 + 0.330208782692001 NA 5' UTR (NM_175161, exon 1 of 5) intron (NM_001355505, intron 1 of 10) 135 NM_175161 70986 Mm.460738 NM_175161 4931422A03Rik - RIKEN cDNA 4931422A03 gene protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001-5 chr2 13557450 13557994 + 0.330208782692001 NA Intergenic Intergenic -13058 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding unique_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001 chr4 155769960 155770329 + 0.330208782692001 NA 3' UTR (NM_147776, exon 4 of 4) 3' UTR (NM_147776, exon 4 of 4) 4417 NM_147776 246228 Mm.26515 NM_147776 ENSMUSG00000042116 Vwa1 4932416A11Rik|WARP von Willebrand factor A domain containing 1 protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001-4 chr16 93095784 93096230 + 0.330208782692001 NA Intergenic Intergenic 257182 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-4 chr15 90430473 90431017 + 0.330208782692001 NA Intergenic Intergenic 77035 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA common_peak2_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-2 chr11 98951291 98951778 + 0.330208782692001 NA intron (NM_009024, intron 2 of 8) intron (NM_009024, intron 2 of 8) -8937 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-13 chr5 149526970 149527361 + 0.330208782692001 NA intron (NR_045423, intron 1 of 4) intron (NR_045423, intron 1 of 4) -1514 NM_029440 381693 Mm.136919 NM_029440 ENSMUSG00000029658 Wdr95 4930434E21Rik WD40 repeat domain 95 protein-coding common_peak1_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-3 chr6 91562461 91562888 + 0.330208782692001 NA Intergenic Intergenic 46639 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-14 chr9 14053361 14053785 + 0.330208782692001 NA Intergenic Intergenic -222728 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-3 chr13 106936278 106936842 + 0.330208782692001 NA intron (NM_001360897, intron 1 of 30) CpG 398 NM_001360897 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-5 chr15 81246800 81247282 + 0.330208782692001 NA intron (NR_077230, intron 1 of 1) intron (NR_077230, intron 1 of 1) 930 NR_077229 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-12 chr8 9977807 9978037 + 0.330208782692001 NA 5' UTR (NM_026868, exon 1 of 3) 5' UTR (NM_026868, exon 1 of 3) 205 NM_026868 68904 Mm.142570 NM_026868 ENSMUSG00000040396 Abhd13 1110065L07Rik|AI463703|AI788994 abhydrolase domain containing 13 protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001-3 chr16 35871002 35871418 + 0.330208782692001 NA exon (NM_001039530, exon 1 of 17) exon (NM_001039530, exon 1 of 17) 172 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-9 chr2 180272750 180273375 + 0.330208782692001 NA intron (NM_145851, intron 1 of 9) intron (NM_145851, intron 1 of 9) 403 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding common_peak2_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-4 chr16 43574326 43574845 + 0.330208782692001 NA intron (NM_001285805, intron 7 of 10) intron (NM_001285805, intron 7 of 10) -66070 NR_030576 100124467 NR_030576 ENSMUSG00000076372 Mir568 Mirn568|mmu-mir-568 microRNA 568 ncRNA common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-2 chr13 52929073 52929615 + 0.330208782692001 NA intron (NM_016709, intron 1 of 9) CpG 333 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-13 chr8 122442907 122443364 + 0.330208782692001 NA promoter-TSS (NR_045696) promoter-TSS (NR_045696) 287 NM_138656 192156 Mm.28146 NM_138656 ENSMUSG00000006517 Mvd C78718|Mpd mevalonate (diphospho) decarboxylase protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-16 chrX 159627623 159628151 + 0.330208782692001 NA intron (NM_001135727, intron 1 of 17) CpG 615 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-2 chr13 41016305 41017017 + 0.330208782692001 NA intron (NM_001360770, intron 1 of 4) intron (NM_001360770, intron 1 of 4) 411 NM_001360770 66154 Mm.30005 NM_025387 ENSMUSG00000021361 Tmem14c 1110021D01Rik|AU020193|HSPC194 transmembrane protein 14C protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-11 chr4 150914700 150915313 + 0.330208782692001 NA Intergenic Intergenic -5085 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-2 chr13 38634841 38635393 + 0.330208782692001 NA promoter-TSS (NM_139063) promoter-TSS (NM_139063) -8 NM_139063 17828 Mm.261554 NM_139063 ENSMUSG00000038982 Bloc1s5 1810074A19Rik|Muted|mu biogenesis of lysosomal organelles complex-1, subunit 5, muted protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001 chr1 105990473 105991157 + 0.330208782692001 NA promoter-TSS (NR_151625) promoter-TSS (NR_151625) 409 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-6 chr17 75255167 75255962 + 0.330208782692001 NA intron (NM_019919, intron 9 of 33) intron (NM_019919, intron 9 of 33) 76783 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_42_32_0.101848410850979_5.09531832478394_0.330208782692001-7 chr9 35267907 35268247 + 0.330208782692001 NA promoter-TSS (NM_175411) promoter-TSS (NM_175411) 196 NM_028040 71989 Mm.273515 NM_028040 ENSMUSG00000032044 Rpusd4 2410001E19Rik RNA pseudouridylate synthase domain containing 4 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-7 chr2 113457734 113458283 + 0.330208782692001 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 16944 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-8 chr2 52072934 52073403 + 0.330208782692001 NA exon (NM_175238, exon 2 of 36) exon (NM_175238, exon 2 of 36) 331 NM_175238 51869 Mm.254530 NM_175238 ENSMUSG00000036202 Rif1 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e replication timing regulatory factor 1 protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-3 chr13 98680046 98680301 + 0.330208782692001 NA Intergenic Intergenic 14658 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-15 chr9 105494579 105495065 + 0.330208782692001 NA intron (NM_001359822, intron 1 of 28) CpG 311 NM_175025 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-3 chr15 81466869 81467149 + 0.330208782692001 NA intron (NM_019712, intron 1 of 4) intron (NM_019712, intron 1 of 4) 693 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-5 chr2 73213798 73214323 + 0.330208782692001 NA intron (NM_030091, intron 1 of 7) intron (NM_030091, intron 1 of 7) 387 NM_030091 67059 Mm.22661 NM_025942 ENSMUSG00000027108 Ola1 2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004 Obg-like ATPase 1 protein-coding common_peak1_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-2 chr10 17350216 17350867 + 0.330208782692001 NA Intergenic Intergenic -254759 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-14 chr6 53730855 53731423 + 0.330208782692001 NA Intergenic Intergenic 89686 NM_025817 66873 Mm.422727 NM_025817 ENSMUSG00000043496 Tril 1200009O22Rik|AI316813|mKIAA0644 TLR4 interactor with leucine-rich repeats protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-11 chr7 136894713 136895346 + 0.330208782692001 NA intron (NM_008598, intron 1 of 4) intron (NM_008598, intron 1 of 4) 418 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-6 chr16 85071930 85072613 + 0.330208782692001 NA intron (NM_001198825, intron 5 of 15) intron (NM_001198825, intron 5 of 15) 100060 NR_045889 100038614 Mm.441351 NR_045889 ENSMUSG00000115518 Gm10791 - predicted gene 10791 ncRNA common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001 chr1 131137719 131138193 + 0.330208782692001 NA intron (NM_145508, intron 1 of 2) CpG 278 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-9 chr2 181525753 181526350 + 0.330208782692001 NA intron (NM_001271584, intron 2 of 5) intron (NM_001271584, intron 2 of 5) 5566 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-8 chr2 115779962 115780548 + 0.330208782692001 NA Intergenic Intergenic 141530 NR_035476 100316703 NR_035476 ENSMUSG00000088606 Mir1951 mir-1951|mmu-mir-1951 microRNA 1951 ncRNA common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-10 chr5 138172101 138172476 + 0.330208782692001 NA promoter-TSS (NM_008568) promoter-TSS (NM_008568) 267 NM_021392 11781 Mm.113205 NM_021392 ENSMUSG00000019518 Ap4m1 4930443L05Rik|Ap4m4 adaptor-related protein complex AP-4, mu 1 protein-coding common_peak2_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-5 chr17 35165135 35165609 + 0.330208782692001 NA promoter-TSS (NM_020027) promoter-TSS (NM_020027) -495 NM_020027 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-3 chr13 48228065 48228434 + 0.330208782692001 NA intron (NR_102303, intron 1 of 2) intron (NR_102303, intron 1 of 2) -33178 NM_031166 15904 Mm.458006 NM_031166 ENSMUSG00000021379 Id4 Idb4|bHLHb27 inhibitor of DNA binding 4 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-12 chr5 101766446 101767226 + 0.330208782692001 NA intron (NM_173370, intron 1 of 12) intron (NM_173370, intron 1 of 12) 1706 NM_173370 74596 Mm.46764 NM_173370 ENSMUSG00000029330 Cds1 4833409J18Rik|AI314024|AW125888 CDP-diacylglycerol synthase 1 protein-coding common_peak1_38_35_-0.163551224759743_5.08814938906244_0.330208782692001-4 chr7 105399508 105399956 + 0.330208782692001 NA intron (NM_001242363, intron 1 of 12) intron (NM_001242363, intron 1 of 12) 322 NM_001242364 74349 Mm.30254 NM_199009 ENSMUSG00000044465 Fam160a2 4632419K20Rik|6530415H11Rik|FHIP family with sequence similarity 160, member A2 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-4 chr15 98540417 98541006 + 0.330208782692001 NA Intergenic Intergenic -6442 NR_153345 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak2_41_32_0.0681405766609267_5.07846440768892_0.330208782692001 chr11 79339728 79340425 + 0.330208782692001 NA intron (NM_010897, intron 1 of 57) CpG 184 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak1_42_32_0.101848410850979_5.09531832478394_0.330208782692001-9 chr2 132247900 132248433 + 0.330208782692001 NA promoter-TSS (NM_001141971) promoter-TSS (NM_001141971) -378 NM_001141971 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak1_41_32_0.0681405766609267_5.07846440768892_0.330208782692001-8 chr2 114174752 114175344 + 0.330208782692001 NA intron (NM_001290788, intron 1 of 33) intron (NM_001290788, intron 1 of 33) 291 NM_009702 11834 Mm.2545 NM_009702 ENSMUSG00000040383 Aqr AW495846|mKIAA0560 aquarius protein-coding common_peak1_160_137_-0.0710670849810295_7.07299091428765_0.33020146522836 chr19 46961642 46963416 + 0.33020146522836 NA promoter-TSS (NR_028353) promoter-TSS (NR_028353) -178 NR_028353 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_117_91_0.068784149692422_6.55795403090322_0.330063835521191 chr6 119847740 119848862 + 0.330063835521191 NA promoter-TSS (NM_053204) promoter-TSS (NM_053204) 108 NR_030776 67289 Mm.418299 NR_030776 3110021A11Rik - RIKEN cDNA 3110021A11 gene ncRNA common_peak1_116_91_0.0565924432797651_6.5518581776969_0.330063835521191 chr2 135677764 135679383 + 0.330063835521191 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) 19026 NM_001355156 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_110_96_-0.0951714784754749_6.55232710294939_0.330063835521191 chr19 10895205 10895839 + 0.330063835521191 NA intron (NM_134129, intron 1 of 15) CpG 291 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak2_110_96_-0.0951714784754749_6.55232710294939_0.330063835521191-2 chr3 122983464 122984482 + 0.330063835521191 NA intron (NM_133857, intron 1 of 15) CpG 474 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak2_116_91_0.0565924432797651_6.5518581776969_0.330063835521191 chr1 181742533 181743950 + 0.330063835521191 NA Intergenic Intergenic 99160 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_110_96_-0.0951714784754749_6.55232710294939_0.330063835521191-3 chr5 21492565 21493692 + 0.330063835521191 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -50399 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak2_110_96_-0.0951714784754749_6.55232710294939_0.330063835521191-4 chr6 100833372 100834844 + 0.330063835521191 NA intron (NM_182939, intron 1 of 8) CpG 470 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_117_91_0.068784149692422_6.55795403090322_0.330063835521191 chr14 25460808 25461745 + 0.330063835521191 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 2091 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_368_308_-0.0458872354222706_8.24851941019324_0.33000787216045 chr13 5864249 5867415 + 0.33000787216045 NA intron (NM_011803, intron 2 of 3) intron (NM_011803, intron 2 of 3) 4343 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672 chr10 39615190 39615417 + 0.330004445983672 NA intron (NM_134000, intron 1 of 8) intron (NM_134000, intron 1 of 8) -1621 NR_152260 100504626 Mm.440236 NR_152259 Gm16364 Gm16365 predicted gene 16364 ncRNA unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-6 chr12 44268517 44268908 + 0.330004445983672 NA promoter-TSS (NM_026164) promoter-TSS (NM_026164) -442 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-16 chr4 48492249 48492512 + 0.330004445983672 NA Intergenic Intergenic -18917 NM_001355740 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-26 chr8 46083685 46083980 + 0.330004445983672 NA intron (NM_207213, intron 4 of 17) intron (NM_207213, intron 4 of 17) 40314 NM_207213 102141 Mm.267258 NM_207213 ENSMUSG00000038291 Snx25 AI661919|Gm1699|Gm173|Sbbi31 sorting nexin 25 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-3 chr11 76469161 76469446 + 0.330004445983672 NA promoter-TSS (NM_001291186) promoter-TSS (NM_001291186) -838 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-6 chr11 115374175 115374487 + 0.330004445983672 NA Intergenic CpG -6575 NM_001346774 217310 Mm.205707 NM_175454 ENSMUSG00000034586 Hid1 C630004H02Rik HID1 domain containing protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-6 chr5 99126534 99126729 + 0.330004445983672 NA Intergenic Intergenic -89552 NM_008926 19092 Mm.263002 NM_008926 ENSMUSG00000029334 Prkg2 AW212535|CGKII|Prkgr2|cGK-II protein kinase, cGMP-dependent, type II protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-9 chr17 6961398 6961702 + 0.330004445983672 NA promoter-TSS (NM_147155) promoter-TSS (NM_147155) -394 NM_147155 380608 Mm.371734 NM_147155 ENSMUSG00000052031 Tagap1 2610315E15Rik|AA415005|FKSG15 T cell activation GTPase activating protein 1 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-7 chr14 54413213 54413525 + 0.330004445983672 NA intron (NM_001253679, intron 2 of 10) intron (NM_001253679, intron 2 of 10) -3897 NM_001253680 20540 Mm.142455 NM_011405 ENSMUSG00000000958 Slc7a7 AI790233|my+lat1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-16 chr5 64243789 64244051 + 0.330004445983672 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 13563 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-16 chr2 165202144 165202354 + 0.330004445983672 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 32488 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-11 chr2 69713069 69713463 + 0.330004445983672 NA promoter-TSS (NM_177244) promoter-TSS (NM_177244) -660 NM_177244 320720 Mm.289566 NM_177244 ENSMUSG00000027086 Fastkd1 5330408N05Rik|mKIAA1800 FAST kinase domains 1 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-9 chr14 76882609 76882923 + 0.330004445983672 NA Intergenic Intergenic 122635 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-2 chr11 55460738 55461118 + 0.330004445983672 NA intron (NM_009720, intron 1 of 3) intron (NM_009720, intron 1 of 3) 280 NM_009720 11927 Mm.217759 NM_009720 ENSMUSG00000018585 Atox1 AI256639|Atx1 antioxidant 1 copper chaperone protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-4 chr11 78179514 78180016 + 0.330004445983672 NA TTS (NR_106113) TTS (NR_106113) 938 NR_106113 102465761 NR_106113 ENSMUSG00000099101 Mir7653 Gm27900|mmu-mir-7653 microRNA 7653 ncRNA unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-10 chr2 35336588 35336845 + 0.330004445983672 NA intron (NM_013515, intron 1 of 6) CpG 293 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-8 chr16 18383393 18383686 + 0.330004445983672 NA intron (NM_001272028, intron 1 of 17) intron (NM_001272028, intron 1 of 17) 2756 NM_001272030 11877 Mm.293599 NM_033474 ENSMUSG00000000325 Arvcf - armadillo repeat gene deleted in velocardiofacial syndrome protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-10 chr17 27857289 27857595 + 0.330004445983672 NA intron (NM_001080769, intron 1 of 20) intron (NM_001080769, intron 1 of 20) 935 NM_001080769 224648 Mm.291291 NM_001080769 ENSMUSG00000039512 Uhrf1bp1 1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127 UHRF1 (ICBP90) binding protein 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-9 chr18 32138784 32139088 + 0.330004445983672 NA promoter-TSS (NM_008934) promoter-TSS (NM_008934) 634 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-12 chr16 23985639 23985912 + 0.330004445983672 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) 3077 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-14 chr4 41315478 41315778 + 0.330004445983672 NA promoter-TSS (NM_026893) promoter-TSS (NM_026893) -727 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-19 chr3 123385543 123385879 + 0.330004445983672 NA intron (NM_201638, intron 1 of 10) intron (NM_201638, intron 1 of 10) 279 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-8 chr12 17303251 17303632 + 0.330004445983672 NA intron (NM_133699, intron 4 of 13) intron (NM_133699, intron 4 of 13) 21289 NM_133699 68775 Mm.178798 NM_133699 ENSMUSG00000020566 Atp6v1c2 1110038G14Rik ATPase, H+ transporting, lysosomal V1 subunit C2 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-19 chr5 143056217 143056464 + 0.330004445983672 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 56680 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-15 chr2 158232746 158233003 + 0.330004445983672 NA Intergenic Intergenic -3650 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672 chr3 37652596 37652978 + 0.330004445983672 NA Intergenic Intergenic 12840 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-20 chr3 132949844 132950056 + 0.330004445983672 NA promoter-TSS (NM_001287103) promoter-TSS (NM_001287103) -136 NM_001287103 114249 Mm.279310 NM_033525 ENSMUSG00000040998 Npnt 1110009H02Rik|AA682063|AI314031|Nctn|POEM nephronectin protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-6 chr15 31345558 31345798 + 0.330004445983672 NA intron (NM_027496, intron 1 of 3) B1F|SINE|Alu 22081 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-5 chr2 102804253 102804599 + 0.330004445983672 NA Intergenic Intergenic -57666 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-23 chrX 94724676 94724950 + 0.330004445983672 NA exon (NM_001081473, exon 1 of 1) exon (NM_001081473, exon 1 of 1) 244 NM_001081473 668166 Mm.426145 NM_001081473 ENSMUSG00000073062 Zxdb Zxda zinc finger, X-linked, duplicated B protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-4 chr10 67673397 67673691 + 0.330004445983672 NA Intergenic Intergenic -101585 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-11 chr19 3840223 3840428 + 0.330004445983672 NA Intergenic Intergenic -11448 NM_001271496 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-29 chrX 75382481 75382725 + 0.330004445983672 NA intron (NM_026126, intron 1 of 4) intron (NM_026126, intron 1 of 4) 204 NM_026126 67391 Mm.126404 NM_026126 ENSMUSG00000031198 Fundc2 4833415N24Rik|DC44|HCBP6 FUN14 domain containing 2 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-10 chr18 77954049 77954264 + 0.330004445983672 NA intron (NM_001195633, intron 3 of 43) intron (NM_001195633, intron 3 of 43) 15689 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-8 chr17 70736887 70737098 + 0.330004445983672 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 109785 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-16 chr7 49887303 49887701 + 0.330004445983672 NA Intergenic Intergenic -22797 NM_001146013 104245 Mm.207053 NM_148931 ENSMUSG00000039728 Slc6a5 Glyt2|prestin solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-11 chr15 95824647 95824835 + 0.330004445983672 NA non-coding (NR_155276, exon 2 of 2) non-coding (NR_155276, exon 2 of 2) 5331 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-28 chr9 63696792 63697080 + 0.330004445983672 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 61058 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-7 chr12 8381646 8382015 + 0.330004445983672 NA Intergenic Intergenic 68397 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-5 chr13 41000054 41000439 + 0.330004445983672 NA promoter-TSS (NM_026550) promoter-TSS (NM_026550) -764 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-12 chr9 107956801 107957054 + 0.330004445983672 NA intron (NM_011634, intron 3 of 14) intron (NM_011634, intron 3 of 14) 5964 NM_011634 22036 Mm.297870 NM_011634 ENSMUSG00000032586 Traip Trip TRAF-interacting protein protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-7 chr15 27324698 27325079 + 0.330004445983672 NA Intergenic Intergenic -141789 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-15 chr5 24412665 24412894 + 0.330004445983672 NA promoter-TSS (NM_001310474) promoter-TSS (NM_001310474) -672 NM_183000 171209 Mm.299636 NM_183000 ENSMUSG00000038276 Asic3 AW742291|Accn3|DRASIC|SLNAC1|TNAC1 acid-sensing (proton-gated) ion channel 3 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-2 chr10 41490079 41490276 + 0.330004445983672 NA promoter-TSS (NM_028430) promoter-TSS (NM_028430) 163 NM_009213 20598 Mm.953 NM_009213 ENSMUSG00000019822 Smpd2 AW108287|nSMase|nSMase1 sphingomyelin phosphodiesterase 2, neutral protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-23 chr7 67459659 67459946 + 0.330004445983672 NA Intergenic Intergenic -86944 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-4 chr16 45378686 45378970 + 0.330004445983672 NA Intergenic Intergenic 30225 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-11 chr9 6652317 6652572 + 0.330004445983672 NA Intergenic Intergenic -385897 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-12 chr19 16959423 16959631 + 0.330004445983672 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 3409 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-15 chr2 4402057 4402267 + 0.330004445983672 NA intron (NM_001177843, intron 1 of 23) intron (NM_001177843, intron 1 of 23) 1186 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-2 chr10 25271057 25271341 + 0.330004445983672 NA intron (NM_018747, intron 4 of 7) intron (NM_018747, intron 4 of 7) 27964 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-3 chr12 119238998 119239313 + 0.330004445983672 NA promoter-TSS (NM_177290) promoter-TSS (NM_177290) -879 NM_177290 320910 Mm.217000 NM_177290 ENSMUSG00000025321 Itgb8 4832412O06Rik integrin beta 8 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-17 chr7 29984718 29984973 + 0.330004445983672 NA intron (NM_001033355, intron 1 of 9) intron (NM_001033355, intron 1 of 9) 890 NM_001167872 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672 chr1 71648493 71649005 + 0.330004445983672 NA intron (NM_001276412, intron 4 of 44) intron (NM_001276412, intron 4 of 44) 4485 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-5 chr10 120810822 120811037 + 0.330004445983672 NA intron (NM_177092, intron 5 of 6) intron (NM_177092, intron 5 of 6) 45197 NR_038003 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-14 chr17 84530524 84530817 + 0.330004445983672 NA intron (NM_001357987, intron 2 of 28) intron (NM_001357987, intron 2 of 28) 18775 NM_001357987 213556 Mm.215159 NM_177606 ENSMUSG00000040852 Plekhh2 AI256725|E030001K05|mKIAA2028 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-15 chr7 19816692 19816910 + 0.330004445983672 NA intron (NM_033601, intron 2 of 8) intron (NM_033601, intron 2 of 8) 5954 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-27 chr8 64673302 64673614 + 0.330004445983672 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 19651 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-21 chr9 57260240 57260472 + 0.330004445983672 NA intron (NM_028820, intron 1 of 2) intron (NM_028820, intron 1 of 2) 2243 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-9 chr16 33382248 33382512 + 0.330004445983672 NA intron (NM_001358570, intron 1 of 8) intron (NM_001358570, intron 1 of 8) 1078 NM_001358570 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-5 chr15 13364912 13365184 + 0.330004445983672 NA Intergenic Intergenic -191373 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-10 chr8 128113860 128114081 + 0.330004445983672 NA Intergenic Intergenic 164255 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-12 chr17 66371272 66371606 + 0.330004445983672 NA intron (NM_172963, intron 6 of 13) intron (NM_172963, intron 6 of 13) 78311 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-15 chr4 45341579 45341917 + 0.330004445983672 NA promoter-TSS (NM_153167) promoter-TSS (NM_153167) -353 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-18 chr5 77382936 77383356 + 0.330004445983672 NA intron (NM_008048, intron 1 of 4) B2_Mm2|SINE|B2 24899 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-21 chr7 140857974 140858223 + 0.330004445983672 NA exon (NM_053194, exon 3 of 10) exon (NM_053194, exon 3 of 10) 701 NM_053194 101489 Mm.281916 NM_053194 ENSMUSG00000025485 Ric8a AI114950|RIC-8|Ric8 RIC8 guanine nucleotide exchange factor A protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-13 chr17 45555980 45556319 + 0.330004445983672 NA exon (NM_001304956, exon 1 of 6) exon (NM_001304956, exon 1 of 6) 449 NM_001304956 18037 Mm.57043 NM_008690 ENSMUSG00000023947 Nfkbie I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-13 chr2 128240395 128240621 + 0.330004445983672 NA Intergenic Intergenic 112933 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-14 chr6 145055768 145055989 + 0.330004445983672 NA intron (NM_007532, intron 1 of 10) B1F2|SINE|Alu -7066 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-2 chr1 162187645 162187859 + 0.330004445983672 NA intron (NM_001038619, intron 14 of 20) intron (NM_001038619, intron 14 of 20) -29871 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-6 chr11 49063731 49064088 + 0.330004445983672 NA intron (NM_001145164, intron 1 of 1) intron (NM_001145164, intron 1 of 1) 303 NM_001145164 100039796 Mm.482363 NM_001145164 ENSMUSG00000078921 Tgtp2 TGTP T cell specific GTPase 2 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-22 chr8 33815485 33815746 + 0.330004445983672 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -67845 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-10 chr15 77795775 77795970 + 0.330004445983672 NA intron (NM_022410, intron 5 of 40) intron (NM_022410, intron 5 of 40) -38862 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-22 chrX 142898793 142898983 + 0.330004445983672 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 67840 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-21 chr7 16843769 16844133 + 0.330004445983672 NA intron (NM_178900, intron 1 of 17) intron (NM_178900, intron 1 of 17) 886 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-2 chr11 4296927 4297217 + 0.330004445983672 NA Intergenic Intergenic 30276 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-17 chr3 60604690 60604939 + 0.330004445983672 NA intron (NM_001253711, intron 3 of 7) intron (NM_001253711, intron 3 of 7) 103635 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-17 chr6 90716153 90716389 + 0.330004445983672 NA exon (NM_001134383, exon 1 of 14) exon (NM_001134383, exon 1 of 14) 258 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-4 chr10 111008988 111009303 + 0.330004445983672 NA intron (NM_001359624, intron 1 of 16) intron (NM_001359624, intron 1 of 16) 864 NM_001359622 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|DHHC-17|Hip14 zinc finger, DHHC domain containing 17 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-11 chr17 47593673 47593986 + 0.330004445983672 NA exon (NM_001081636, exon 3 of 7) exon (NM_001081636, exon 3 of 7) 362 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672 chr10 17725084 17725314 + 0.330004445983672 NA 3' UTR (NM_010828, exon 2 of 2) 3' UTR (NM_010828, exon 2 of 2) 1971 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-25 chr7 134287538 134287760 + 0.330004445983672 NA intron (NM_001081331, intron 5 of 7) intron (NM_001081331, intron 5 of 7) -62552 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-2 chr1 134094669 134094949 + 0.330004445983672 NA Intergenic Intergenic -15654 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-9 chr8 39011039 39011253 + 0.330004445983672 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 5301 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-5 chr11 101464467 101464719 + 0.330004445983672 NA intron (NM_012037, intron 1 of 5) intron (NM_012037, intron 1 of 5) 1606 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-18 chr6 114457932 114458208 + 0.330004445983672 NA promoter-TSS (NM_001317124) promoter-TSS (NM_001317124) -452 NM_001317124 15465 Mm.333327 NM_008285 ENSMUSG00000053004 Hrh1 Bphs|H1R|HH1R|Hir histamine receptor H1 protein-coding unique_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672 chr11 22841006 22841367 + 0.330004445983672 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 18549 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-8 chr15 40365023 40365259 + 0.330004445983672 NA Intergenic Intergenic 162136 NR_046185 432945 Mm.321981 NR_046185 ENSMUSG00000056332 Gm16294 EG432945 predicted gene 16294 ncRNA unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-14 chr3 95994155 95994465 + 0.330004445983672 NA intron (NM_023320, intron 2 of 5) intron (NM_023320, intron 2 of 5) 1529 NM_023320 67220 Mm.458147 NM_023320 ENSMUSG00000015745 Plekho1 2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2 pleckstrin homology domain containing, family O member 1 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-3 chr10 45577858 45578116 + 0.330004445983672 NA 5' UTR (NM_172473, exon 1 of 24) 5' UTR (NM_172473, exon 1 of 24) 158 NM_172473 209462 Mm.458633 NM_172473 ENSMUSG00000038822 Hace1 1700042J16Rik|A730034A22Rik|BC025474 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-19 chr8 31526264 31526641 + 0.330004445983672 NA Intergenic Intergenic 158703 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA unique_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-2 chr6 117606747 117607075 + 0.330004445983672 NA Intergenic Intergenic 111676 NR_152214 100126203 Mm.217172 NR_152214 6820426E19Rik Gm43983 RIKEN cDNA 6820426E19 gene ncRNA common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-16 chr2 52437874 52438118 + 0.330004445983672 NA intron (NM_001037099, intron 12 of 13) intron (NM_001037099, intron 12 of 13) -13122 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-7 chr11 101627138 101627382 + 0.330004445983672 NA promoter-TSS (NM_025654) promoter-TSS (NM_025654) -689 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-13 chr4 40854323 40854604 + 0.330004445983672 NA promoter-TSS (NM_022305) promoter-TSS (NM_022305) 74 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672 chr10 23458212 23458538 + 0.330004445983672 NA Intergenic Intergenic -108432 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-13 chr3 136432123 136432435 + 0.330004445983672 NA Intergenic Intergenic 17070 NR_040592 70055 Mm.261063 NR_040592 ENSMUSG00000099508 1700030L20Rik - RIKEN cDNA 1700030L20 gene ncRNA common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-24 chr7 98815779 98816029 + 0.330004445983672 NA Intergenic Intergenic -19208 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-3 chr11 69366917 69367231 + 0.330004445983672 NA intron (NM_146019, intron 1 of 39) intron (NM_146019, intron 1 of 39) 2352 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-18 chr3 55115209 55115608 + 0.330004445983672 NA intron (NM_001144987, intron 1 of 8) Charlie5|DNA|hAT-Charlie 3242 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-4 chr11 99466433 99466726 + 0.330004445983672 NA Intergenic Intergenic 26531 NM_033373 94179 Mm.290657 NM_033373 ENSMUSG00000006777 Krt23 CK23|Haik1|K23|Krt1-23 keratin 23 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-11 chr18 36401234 36401548 + 0.330004445983672 NA Intergenic Intergenic 52767 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672 chr1 34801802 34802106 + 0.330004445983672 NA 5' UTR (NM_183019, exon 1 of 10) 5' UTR (NM_183019, exon 1 of 10) 232 NM_183019 226970 Mm.41604 NM_183019 ENSMUSG00000037509 Arhgef4 9330140K16Rik|Asef Rho guanine nucleotide exchange factor (GEF) 4 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-14 chr19 9955505 9955716 + 0.330004445983672 NA Intergenic Intergenic -24990 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-18 chr8 11402064 11402412 + 0.330004445983672 NA intron (NM_009932, intron 8 of 47) intron (NM_009932, intron 8 of 47) -75691 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-8 chr8 10865407 10865596 + 0.330004445983672 NA Intergenic Intergenic 16953 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672 chr1 132196673 132196988 + 0.330004445983672 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) -1258 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-20 chr6 34866085 34866287 + 0.330004445983672 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 3040 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-8 chr11 117781963 117782275 + 0.330004445983672 NA promoter-TSS (NM_001195088) promoter-TSS (NM_001195088) -178 NM_001195090 217356 Mm.116675 NM_181856 ENSMUSG00000050106 Tmc8 EVIN2|Ever2|mFLJ00400 transmembrane channel-like gene family 8 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-12 chr3 107753636 107753937 + 0.330004445983672 NA exon (NM_001113530, exon 4 of 9) exon (NM_001113530, exon 4 of 9) 6683 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-5 chr10 95768519 95768875 + 0.330004445983672 NA Intergenic Intergenic -171966 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-20 chr7 99307713 99307981 + 0.330004445983672 NA intron (NM_001048167, intron 1 of 2) intron (NM_001048167, intron 1 of 2) 39501 NM_001043355 17760 Mm.154087 NM_010837 ENSMUSG00000055407 Map6 2810411E12Rik|Map-6|Mtap6|STOP microtubule-associated protein 6 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-7 chr16 55632722 55633023 + 0.330004445983672 NA Intergenic Intergenic 138141 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-7 chr5 149377066 149377336 + 0.330004445983672 NA Intergenic Intergenic -34548 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-3 chr11 87127212 87127508 + 0.330004445983672 NA 5' UTR (NM_197987, exon 1 of 24) 5' UTR (NM_197987, exon 1 of 24) 285 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-9 chr12 8436906 8437170 + 0.330004445983672 NA Intergenic Intergenic 62971 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-17 chr3 49094724 49094976 + 0.330004445983672 NA Intergenic Intergenic -485750 NR_003617 66332 Mm.46124 NM_025493 1700018B24Rik - enhancer of rudimentary homolog pseudogene pseudo unique_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-2 chr16 22857281 22857514 + 0.330004445983672 NA promoter-TSS (NM_026400) promoter-TSS (NM_026400) 272 NM_001081368 70573 Mm.68291 NM_001081368 ENSMUSG00000004462 Tbccd1 5730478M09Rik|AU015083|BB165076 TBCC domain containing 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-19 chr7 3332986 3333225 + 0.330004445983672 NA intron (NM_133189, intron 1 of 5) intron (NM_133189, intron 1 of 5) 150 NM_133189 81904 Mm.214994 NM_133189 ENSMUSG00000069806 Cacng7 - calcium channel, voltage-dependent, gamma subunit 7 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-13 chr17 68003882 68004121 + 0.330004445983672 NA exon (NM_172964, exon 1 of 18) exon (NM_172964, exon 1 of 18) 107 NM_172964 268970 Mm.9935 NM_172964 ENSMUSG00000024043 Arhgap28 AU044757|AW550892|E130310N06 Rho GTPase activating protein 28 protein-coding unique_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-12 chr2 119046941 119047350 + 0.330004445983672 NA promoter-TSS (NM_029617) promoter-TSS (NM_029617) 26 NM_029617 76464 Mm.202518 NM_029617 ENSMUSG00000027326 Knl1 2310043D08Rik|5730505K17Rik|Casc5 kinetochore scaffold 1 protein-coding common_peak2_18_14_0.069327838509873_3.94155451486345_0.330004445983672-4 chr11 101003494 101003717 + 0.330004445983672 NA Intergenic Intergenic -5847 NM_016920 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding common_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-3 chr10 89731896 89732102 + 0.330004445983672 NA intron (NM_025914, intron 1 of 10) intron (NM_025914, intron 1 of 10) 246 NM_001359468 67019 Mm.335292 NM_025914 ENSMUSG00000019948 Actr6 2010200J04Rik|AU044443|Arp6|ArpX|CDA12 ARP6 actin-related protein 6 protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-10 chr15 89109931 89110215 + 0.330004445983672 NA exon (NM_001163319, exon 5 of 25) exon (NM_001163319, exon 5 of 25) 13077 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding unique_peak1_18_14_0.069327838509873_3.94155451486345_0.330004445983672-6 chr15 25562609 25562854 + 0.330004445983672 NA Intergenic Intergenic -59819 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak2_16_16_-0.270577004340643_3.95217433908002_0.330004445983672-22 chr7 19083944 19084158 + 0.330004445983672 NA exon (NM_001190491, exon 1 of 13) exon (NM_001190491, exon 1 of 13) 202 NM_001190491 13400 Mm.6529 NM_032418 ENSMUSG00000030409 Dmpk DM|DMK|Dm15|MDPK|MT-PK dystrophia myotonica-protein kinase protein-coding common_peak2_74_58_0.0604914150179212_5.9128887568708_0.329988325168889-2 chr15 102625131 102625527 + 0.329988325168889 NA 5' UTR (NM_001310070, exon 1 of 12) 5' UTR (NM_001310070, exon 1 of 12) 135 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000099083 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak1_74_58_0.0604914150179212_5.9128887568708_0.329988325168889-2 chr9 121856872 121857536 + 0.329988325168889 NA intron (NM_001357838, intron 1 of 5) CpG 592 NM_001357841 56295 Mm.347915 NM_019814 ENSMUSG00000038412 Higd1a 2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1 HIG1 domain family, member 1A protein-coding common_peak1_74_58_0.0604914150179212_5.9128887568708_0.329988325168889 chr6 42490680 42491425 + 0.329988325168889 NA Intergenic Intergenic -3838 NM_001011528 259144 Mm.377865 NM_001011528 ENSMUSG00000090631 Olfr456 MOR257-7P olfactory receptor 456 protein-coding common_peak2_75_58_0.0794654256100609_5.92237576216687_0.329988325168889-3 chr2 48948557 48949240 + 0.329988325168889 NA promoter-TSS (NM_029924) promoter-TSS (NM_029924) 369 NM_001177313 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding common_peak2_75_58_0.0794654256100609_5.92237576216687_0.329988325168889 chr10 13964748 13965647 + 0.329988325168889 NA promoter-TSS (NM_001358783) promoter-TSS (NM_001358783) -878 NM_001358783 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP-1|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_75_58_0.0794654256100609_5.92237576216687_0.329988325168889-2 chr11 20543293 20543854 + 0.329988325168889 NA 5' UTR (NM_021372, exon 1 of 2) 5' UTR (NM_021372, exon 1 of 2) 320 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak2_74_58_0.0604914150179212_5.9128887568708_0.329988325168889-3 chr2 156143867 156144650 + 0.329988325168889 NA promoter-TSS (NM_010911) promoter-TSS (NM_010911) 25 NM_025946 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding common_peak2_74_58_0.0604914150179212_5.9128887568708_0.329988325168889-4 chr2 167575137 167575637 + 0.329988325168889 NA Intergenic Intergenic 37192 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak2_74_58_0.0604914150179212_5.9128887568708_0.329988325168889 chr15 11565651 11566397 + 0.329988325168889 NA Intergenic Intergenic -166366 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_70_62_-0.112659181793186_5.92095033260332_0.329988325168877-3 chr3 52676877 52677344 + 0.329988325168877 NA Intergenic Intergenic -62614 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak2_70_62_-0.112659181793186_5.92095033260332_0.329988325168877-2 chr2 156547204 156548395 + 0.329988325168877 NA 5' UTR (NM_001164818, exon 1 of 5) 5' UTR (NM_001164818, exon 1 of 5) 223 NM_001164818 68295 Mm.253648 NM_026661 ENSMUSG00000027628 Aar2 0610011L14Rik AAR2 splicing factor homolog protein-coding common_peak2_70_62_-0.112659181793186_5.92095033260332_0.329988325168877 chr14 18238397 18239021 + 0.329988325168877 NA intron (NM_011584, intron 1 of 7) CpG 397 NM_011584 353187 Mm.26587 NM_011584 ENSMUSG00000021775 Nr1d2 RVR|Rev-erb nuclear receptor subfamily 1, group D, member 2 protein-coding common_peak1_70_62_-0.112659181793186_5.92095033260332_0.329988325168877 chr2 32423451 32424092 + 0.329988325168877 NA intron (NM_146118, intron 1 of 10) intron (NM_146118, intron 1 of 10) 295 NM_001290558 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_230_181_0.0468204346267029_7.53120485751205_0.329866995874136 chr15 99251041 99252936 + 0.329866995874136 NA promoter-TSS (NM_016766) promoter-TSS (NM_016766) -27 NM_016766 51812 Mm.383472 NM_016766 ENSMUSG00000037570 Mcrs1 C78274|ICP22BP|MSP58|P78 microspherule protein 1 protein-coding common_peak2_162_139_-0.0741400272205421_7.0922130033347_0.329772402906439 chr11 113682990 113684605 + 0.329772402906439 NA promoter-TSS (NM_001361593) promoter-TSS (NM_001361593) 354 NM_138598 28081 Mm.351688 NM_138598 ENSMUSG00000041629 Fam104a D11Wsu99e family with sequence similarity 104, member A protein-coding common_peak2_111_97_-0.0971207094697721_6.56614948938032_0.329756527030127-2 chr5 149050937 149051870 + 0.329756527030127 NA 5' UTR (NM_001313894, exon 1 of 5) 5' UTR (NM_001313894, exon 1 of 5) 213 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak1_111_97_-0.0971207094697721_6.56614948938032_0.329756527030127 chr8 128488744 128489744 + 0.329756527030127 NA intron (NM_001358959, intron 12 of 16) intron (NM_001358959, intron 12 of 16) 130003 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak2_111_97_-0.0971207094697721_6.56614948938032_0.329756527030127 chr5 144768037 144769497 + 0.329756527030127 NA promoter-TSS (NM_001081362) promoter-TSS (NM_001081362) -25 NM_001081362 100683 Mm.273570 NM_001081362 ENSMUSG00000045482 Trrap AI481500 transformation/transcription domain-associated protein protein-coding common_peak1_118_92_0.065276116229307_6.57179686922268_0.329756527030102 chr13 81782698 81783717 + 0.329756527030102 NA promoter-TSS (NM_007684) promoter-TSS (NM_007684) -40 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_163_140_-0.0756467643715997_7.10172797021299_0.329562570646051 chr6 125480498 125482155 + 0.329562570646051 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 13434 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_71_63_-0.115343730900539_5.94232813454973_0.329513426812597 chr19 4476994 4477807 + 0.329513426812597 NA promoter-TSS (NM_134164) promoter-TSS (NM_134164) -257 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak1_76_59_0.0739438565626704_5.94386252388985_0.329513426812585-3 chr6 120191533 120192456 + 0.329513426812585 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -1829 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_76_59_0.0739438565626704_5.94386252388985_0.329513426812585-3 chr19 55258366 55258967 + 0.329513426812585 NA intron (NM_027976, intron 1 of 21) intron (NM_027976, intron 1 of 21) 5297 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak1_76_59_0.0739438565626704_5.94386252388985_0.329513426812585-2 chr17 88064359 88064980 + 0.329513426812585 NA 5' UTR (NM_001348248, exon 1 of 23) 5' UTR (NM_001348248, exon 1 of 23) 263 NM_001348248 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_76_59_0.0739438565626704_5.94386252388985_0.329513426812585-2 chr18 24020401 24020838 + 0.329513426812585 NA promoter-TSS (NM_001357447) promoter-TSS (NM_001357447) 194 NM_021559 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf24 zinc finger protein 24 protein-coding common_peak2_76_59_0.0739438565626704_5.94386252388985_0.329513426812585 chr15 93274559 93275172 + 0.329513426812585 NA intron (NM_001346785, intron 1 of 7) CpG 314 NM_001357006 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_76_59_0.0739438565626704_5.94386252388985_0.329513426812585 chr12 32954269 32955126 + 0.329513426812585 NA promoter-TSS (NR_044986) promoter-TSS (NR_044986) 511 NM_198710 19027 Mm.246304 NM_013635 ENSMUSG00000020570 Sypl AI314763|AI604763|D12Ertd446e|PanI|Pphn|Sypl1 synaptophysin-like protein protein-coding common_peak2_76_59_0.0739438565626704_5.94386252388985_0.329513426812585-4 chr5 92082693 92083597 + 0.329513426812585 NA promoter-TSS (NM_001080797) promoter-TSS (NM_001080797) 192 NM_001359196 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding common_peak2_304_240_0.039813672680304_7.93279617257011_0.329509598051045 chr7 89558672 89561922 + 0.329509598051045 NA Intergenic Intergenic -33110 NM_001360752 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_113_98_-0.0864125428802529_6.58615034863948_0.329455656548916-2 chr9 21616263 21617197 + 0.329455656548916 NA intron (NM_001357764, intron 1 of 34) intron (NM_001357764, intron 1 of 34) 561 NM_001174078 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 BAF190A|Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding common_peak1_113_98_-0.0864125428802529_6.58615034863948_0.329455656548916 chr5 39638145 39639420 + 0.329455656548916 NA intron (NM_010474, intron 1 of 1) intron (NM_010474, intron 1 of 1) 5849 NM_010474 15476 Mm.12559 NM_010474 ENSMUSG00000051022 Hs3st1 3-Ost|D5Wsu110e|Hsg3ost heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding common_peak2_113_98_-0.0864125428802529_6.58615034863948_0.329455656548916 chr9 21616254 21617194 + 0.329455656548916 NA intron (NM_001357764, intron 1 of 34) intron (NM_001357764, intron 1 of 34) 555 NM_001174078 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 BAF190A|Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding common_peak1_119_93_0.0618337343750035_6.58550571886514_0.329455656548891 chr7 73618593 73619499 + 0.329455656548891 NA Intergenic Intergenic -60651 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_565_469_-0.0381141183298226_8.85745988740009_0.329374583372032 chr8 84980261 84982990 + 0.329374583372032 NA Intergenic MIR|SINE|MIR -2877 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-3 chr18 60613675 60614495 + 0.329362479200675 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) -3981 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-2 chr14 20836645 20837254 + 0.329362479200675 NA intron (NM_008873, intron 1 of 10) intron (NM_008873, intron 1 of 10) 287 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-3 chr19 43689825 43690275 + 0.329362479200675 NA intron (NM_053103, intron 1 of 12) CpG 361 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-3 chr15 102331843 102332421 + 0.329362479200675 NA TTS (NM_027044) TTS (NM_027044) 423 NM_021713 60315 Mm.251638 NM_021713 ENSMUSG00000001285 Myg1 0610023A07Rik|2810433J21Rik|5830429P19Rik|AI325965|Gamm1 melanocyte proliferating gene 1 protein-coding common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-6 chr4 46489514 46490203 + 0.329362479200675 NA intron (NM_053179, intron 1 of 5) intron (NM_053179, intron 1 of 5) 529 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-4 chr2 73311987 73312501 + 0.329362479200675 NA promoter-TSS (NM_029022) promoter-TSS (NM_029022) 348 NM_025854 66935 Mm.292140 NM_025854 ENSMUSG00000041777 Cir1 1700023B02Rik|2810021A19Rik|Cicr|Cir corepressor interacting with RBPJ, 1 protein-coding common_peak1_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-6 chr7 64276274 64276860 + 0.329362479200675 NA Intergenic Intergenic -11103 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-7 chr5 139826577 139827064 + 0.329362479200675 NA promoter-TSS (NM_001356963) promoter-TSS (NM_001356963) 74 NM_001356963 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675 chr11 116853275 116853615 + 0.329362479200675 NA promoter-TSS (NM_011358) promoter-TSS (NM_011358) -317 NM_001361585 69900 Mm.348004 NM_178620 ENSMUSG00000020818 Mfsd11 2600014M03Rik major facilitator superfamily domain containing 11 protein-coding common_peak1_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-4 chr4 108999819 109000416 + 0.329362479200675 NA promoter-TSS (NM_001347169) promoter-TSS (NM_001347169) -538 NM_001346554 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-6 chr5 138172025 138172424 + 0.329362479200675 NA promoter-TSS (NM_001356576) promoter-TSS (NM_001356576) 203 NM_021392 11781 Mm.113205 NM_021392 ENSMUSG00000019518 Ap4m1 4930443L05Rik|Ap4m4 adaptor-related protein complex AP-4, mu 1 protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-5 chr18 6136364 6136917 + 0.329362479200675 NA promoter-TSS (NM_029277) promoter-TSS (NM_029277) -542 NM_001039692 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-2 chr15 83167111 83167475 + 0.329362479200675 NA intron (NM_029787, intron 1 of 8) intron (NM_029787, intron 1 of 8) 4915 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-4 chr2 84650889 84651170 + 0.329362479200675 NA promoter-TSS (NM_007615) promoter-TSS (NM_007615) -289 NM_001355066 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675 chr11 120347331 120347782 + 0.329362479200675 NA promoter-TSS (NR_105900) promoter-TSS (NR_105900) -143 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-7 chr4 155223478 155223818 + 0.329362479200675 NA Intergenic Intergenic -1113 NM_001357191 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-2 chr11 95982228 95982712 + 0.329362479200675 NA intron (NM_009951, intron 2 of 14) intron (NM_009951, intron 2 of 14) -19087 NR_037223 100526468 NR_037223 ENSMUSG00000093358 Mir3063 mmu-mir-3063 microRNA 3063 ncRNA common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-8 chr8 107436664 107437083 + 0.329362479200675 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 475 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675 chr16 43701639 43702118 + 0.329362479200675 NA Intergenic Intergenic -37694 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_39_36_-0.16681140223052_5.12604766451369_0.329362479200675 chr11 33513096 33513620 + 0.329362479200675 NA intron (NR_110973, intron 1 of 28) CpG 388 NR_110973 66011 Mm.383775 NM_023146 ENSMUSG00000040594 Ranbp17 - RAN binding protein 17 protein-coding common_peak2_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-5 chr2 131761788 131762242 + 0.329362479200675 NA Intergenic Intergenic 85641 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-2 chr19 5988945 5989213 + 0.329362479200675 NA 3' UTR (NM_007600, exon 22 of 22) 3' UTR (NM_007600, exon 22 of 22) -2936 NM_198650 381203 Mm.329638 NM_198650 ENSMUSG00000037451 Slc22a20 Gm963|OAT1-L|mOAT6 solute carrier family 22 (organic anion transporter), member 20 protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-6 chr3 98014591 98015193 + 0.329362479200675 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 1354 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-9 chr8 127720238 127720953 + 0.329362479200675 NA Intergenic Intergenic 420943 NM_001013580 93742 Mm.299254 NM_033620 ENSMUSG00000025812 Pard3 AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip par-3 family cell polarity regulator protein-coding common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-5 chr2 131510129 131510543 + 0.329362479200675 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 18474 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-5 chr5 34186883 34187629 + 0.329362479200675 NA intron (NM_010753, intron 2 of 5) CpG 454 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak1_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-8 chr7 141414359 141414799 + 0.329362479200675 NA promoter-TSS (NM_172116) promoter-TSS (NM_172116) -454 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Gatd1 BC023835|D230016J19Rik|Pddc1 glutamine amidotransferase like class 1 domain containing 1 protein-coding common_peak1_39_36_-0.16681140223052_5.12604766451369_0.329362479200675-3 chr11 101120262 101120710 + 0.329362479200675 NA promoter-TSS (NM_001361583) promoter-TSS (NM_001361583) 355 NM_134024 103733 Mm.479145 NM_134024 ENSMUSG00000035198 Tubg1 1500010O08Rik|AI451582|AI503389|Tubg tubulin, gamma 1 protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675-4 chr17 34654624 34655060 + 0.329362479200675 NA 3' UTR (NM_017406, exon 18 of 18) 3' UTR (NM_017406, exon 18 of 18) 7696 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak2_43_33_0.0917125613467213_5.1333191219237_0.329362479200675 chr12 79028919 79029718 + 0.329362479200675 NA 5' UTR (NM_181073, exon 1 of 29) 5' UTR (NM_181073, exon 1 of 29) 155 NM_181073 211945 Mm.478321 NM_181073 ENSMUSG00000060716 Plekhh1 AV308913|C77772|D630024D12Rik|mKIAA1200 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 protein-coding common_peak1_164_141_-0.0771341954995322_7.11118002175492_0.32935578015718 chr17 47008902 47010528 + 0.32935578015718 NA intron (NM_146078, intron 1 of 46) intron (NM_146078, intron 1 of 46) 817 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak2_164_141_-0.0771341954995322_7.11118002175492_0.32935578015718 chr13 31807041 31808881 + 0.32935578015718 NA exon (NM_008592, exon 1 of 1) exon (NM_008592, exon 1 of 1) 1315 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding common_peak1_120_94_0.0584551526453767_6.59908318465364_0.329161023841147-3 chr8 126808656 126809333 + 0.329161023841147 NA Intergenic Intergenic -40026 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_120_94_0.0584551526453767_6.59908318465364_0.329161023841147-2 chr15 7810431 7811710 + 0.329161023841147 NA exon (NM_001301332, exon 1 of 3) exon (NM_001301332, exon 1 of 3) 1022 NM_001301332 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_120_94_0.0584551526453767_6.59908318465364_0.329161023841147 chr10 80797598 80798435 + 0.329161023841147 NA promoter-TSS (NM_013651) promoter-TSS (NM_013651) 610 NM_023900 78670 Mm.41479 NM_023900 ENSMUSG00000035278 Plekhj1 9530063M10Rik pleckstrin homology domain containing, family J member 1 protein-coding common_peak1_114_99_-0.0884009687978358_6.59965570537581_0.329161023841098 chr17 27083913 27084956 + 0.329161023841098 NA intron (NM_080553, intron 3 of 57) intron (NM_080553, intron 3 of 57) -6811 NR_106142 102465779 NR_106142 ENSMUSG00000098826 Mir7677 Gm27400|mmu-mir-7677 microRNA 7677 ncRNA common_peak1_114_99_-0.0884009687978358_6.59965570537581_0.329161023841098-2 chr4 21847587 21848425 + 0.329161023841098 NA non-coding (NR_028384, exon 1 of 1) non-coding (NR_028384, exon 1 of 1) 423 NM_025669 66625 Mm.100117 NM_025669 ENSMUSG00000028248 Pnisr 5730406M06Rik|AA673174|Pinsr|Sfrs18|Srsf18 PNN interacting serine/arginine-rich protein-coding common_peak1_173_136_0.0506615610709513_7.123362863496_0.32915196576917 chr15 38453806 38455116 + 0.32915196576917 NA Intergenic Intergenic 36086 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_77_60_0.0685814595464374_5.9650280673361_0.329053855867857-3 chr15 103377496 103378326 + 0.329053855867857 NA Intergenic Intergenic -11120 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_77_60_0.0685814595464374_5.9650280673361_0.329053855867857-6 chr7 133792069 133793179 + 0.329053855867857 NA intron (NM_025850, intron 1 of 10) intron (NM_025850, intron 1 of 10) -9839 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_77_60_0.0685814595464374_5.9650280673361_0.329053855867857-5 chr6 29735498 29736258 + 0.329053855867857 NA 5' UTR (NM_176996, exon 1 of 12) 5' UTR (NM_176996, exon 1 of 12) 381 NM_176996 319757 Mm.29279 NM_176996 ENSMUSG00000001761 Smo E130215L21Rik|Smoh|bnb|smoothened smoothened, frizzled class receptor protein-coding common_peak1_77_60_0.0685814595464374_5.9650280673361_0.329053855867857-4 chr5 142821962 142822342 + 0.329053855867857 NA Intergenic Intergenic -4765 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_77_60_0.0685814595464374_5.9650280673361_0.329053855867857 chr13 28758132 28758820 + 0.329053855867857 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -47603 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak2_77_60_0.0685814595464374_5.9650280673361_0.329053855867857-2 chr13 55445443 55446076 + 0.329053855867857 NA intron (NM_001038018, intron 1 of 15) CpG 428 NM_001112711 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak1_77_60_0.0685814595464374_5.9650280673361_0.329053855867857 chr1 82316639 82317535 + 0.329053855867857 NA intron (NM_029777, intron 1 of 6) intron (NM_029777, intron 1 of 6) 508 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak1_77_60_0.0685814595464374_5.9650280673361_0.329053855867857-2 chr13 8995213 8996007 + 0.329053855867857 NA intron (NM_027000, intron 1 of 16) intron (NM_027000, intron 1 of 16) 402 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding common_peak2_72_64_-0.117952377462528_5.96339162429719_0.329053855867844-4 chr8 122443750 122444429 + 0.329053855867844 NA promoter-TSS (NM_138656) promoter-TSS (NM_138656) 433 NR_045696 100689703 Mm.271989 NR_045696 9330133O14Rik - RIKEN cDNA 9330133O14 gene ncRNA common_peak2_72_64_-0.117952377462528_5.96339162429719_0.329053855867844-2 chr16 32430550 32431323 + 0.329053855867844 NA promoter-TSS (NM_009981) promoter-TSS (NM_009981) 15 NM_009981 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_72_64_-0.117952377462528_5.96339162429719_0.329053855867844 chrX 7762865 7763705 + 0.329053855867844 NA promoter-TSS (NM_001271491) promoter-TSS (NM_001271491) 624 NM_172472 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding common_peak2_72_64_-0.117952377462528_5.96339162429719_0.329053855867844-3 chr4 119294810 119295495 + 0.329053855867844 NA promoter-TSS (NM_011732) promoter-TSS (NM_011732) -639 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding common_peak2_72_64_-0.117952377462528_5.96339162429719_0.329053855867844 chr10 24447504 24448211 + 0.329053855867844 NA Intergenic Intergenic -147585 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_72_64_-0.117952377462528_5.96339162429719_0.329053855867844 chr15 84714632 84715503 + 0.329053855867844 NA non-coding (NR_040347, exon 3 of 3) non-coding (NR_040347, exon 3 of 3) -4985 NM_001164628 73167 Mm.128411 NM_028455 ENSMUSG00000078954 Arhgap8 3110043J09Rik Rho GTPase activating protein 8 protein-coding common_peak2_167_143_-0.07150026456942_7.1341748691576_0.328951063688879 chr9 85842276 85844182 + 0.328951063688879 NA intron (NM_001164792, intron 1 of 1) CpG 377 NM_001164792 21983 Mm.20864 NM_011627 ENSMUSG00000035274 Tpbg 5T4|AW495680|WAIF1 trophoblast glycoprotein protein-coding common_peak1_121_95_0.0551385890084761_6.61253179522539_0.328872436889812 chr2 39225644 39226385 + 0.328872436889812 NA intron (NM_024209, intron 1 of 6) CpG 335 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik|Pp6C protein phosphatase 6, catalytic subunit protein-coding common_peak1_115_100_-0.0903534409477729_6.61303476227791_0.328872436889787-2 chr9 110532589 110533497 + 0.328872436889787 NA intron (NM_001081340, intron 1 of 20) CpG 446 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding common_peak1_115_100_-0.0903534409477729_6.61303476227791_0.328872436889787 chr1 182340619 182341599 + 0.328872436889787 NA intron (NM_175127, intron 1 of 4) CpG 497 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_175_138_0.0461243707270649_7.14200325808704_0.328753011933461 chr17 24168565 24169946 + 0.328753011933461 NA promoter-TSS (NM_001361535) promoter-TSS (NM_001361535) 140 NR_037854 100039636 Mm.30155 NR_037854 Atp6v0c-ps2 Atp6c-rs2|Atp6c3|Atp6l-ps2|Atp6v0c-rs2|Atpl-rs2|Gm15487|MGPLlambda1-3 ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2 pseudo common_peak2_175_138_0.0461243707270649_7.14200325808704_0.328753011933461 chr19 6057962 6059226 + 0.328753011933461 NA promoter-TSS (NM_026246) promoter-TSS (NM_026246) 627 NM_001190436 14109 Mm.329631 NM_007990 ENSMUSG00000038274 Fau MNSFbeta Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein-coding common_peak1_313_247_0.0401660210642873_7.97427932091902_0.328715277978909 chr19 53528222 53530608 + 0.328715277978909 NA promoter-TSS (NM_001085390) promoter-TSS (NM_001085390) 97 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_78_61_0.0633713558884015_5.98588198833108_0.328608881955069-4 chr4 138216058 138216940 + 0.328608881955069 NA promoter-TSS (NM_001122896) promoter-TSS (NM_001122896) -113 NM_001122896 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak1_78_61_0.0633713558884015_5.98588198833108_0.328608881955069 chr1 60098391 60099045 + 0.328608881955069 NA promoter-TSS (NM_001199061) promoter-TSS (NM_001199061) -218 NM_001199060 57750 Mm.281079 NM_021312 ENSMUSG00000026019 Wdr12 4933402C23Rik|Ytm1|Ytm1p WD repeat domain 12 protein-coding common_peak1_78_61_0.0633713558884015_5.98588198833108_0.328608881955069-3 chr17 29459810 29460638 + 0.328608881955069 NA Intergenic MIRb|SINE|MIR -30821 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_78_61_0.0633713558884015_5.98588198833108_0.328608881955069-2 chr11 20543255 20543897 + 0.328608881955069 NA 5' UTR (NM_021372, exon 1 of 2) 5' UTR (NM_021372, exon 1 of 2) 323 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak1_73_65_-0.120488357874255_5.98414994042133_0.328608881955056-3 chr7 24507036 24507855 + 0.328608881955056 NA intron (NR_110958, intron 1 of 2) CpG 358 NR_110958 232969 Mm.181332 NM_146183 ENSMUSG00000064264 Zfp428 2410005H09Rik|AV271806|AW047854|Znf428 zinc finger protein 428 protein-coding common_peak2_73_65_-0.120488357874255_5.98414994042133_0.328608881955056-2 chr2 167231768 167232878 + 0.328608881955056 NA intron (NM_008968, intron 1 of 9) intron (NM_008968, intron 1 of 9) 8214 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak1_73_65_-0.120488357874255_5.98414994042133_0.328608881955056 chr3 109156278 109157035 + 0.328608881955056 NA intron (NM_172685, intron 4 of 9) intron (NM_172685, intron 4 of 9) 33507 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_73_65_-0.120488357874255_5.98414994042133_0.328608881955056 chr10 24470318 24471590 + 0.328608881955056 NA Intergenic Intergenic -124488 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_73_65_-0.120488357874255_5.98414994042133_0.328608881955056-3 chr7 25249934 25250585 + 0.328608881955056 NA intron (NM_010155, intron 1 of 3) CpG 499 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak1_73_65_-0.120488357874255_5.98414994042133_0.328608881955056-2 chr4 133659756 133660508 + 0.328608881955056 NA Intergenic Intergenic 12515 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak2_117_101_-0.0800792362220601_6.63238572386047_0.328589711479888 chr2 13572225 13573282 + 0.328589711479888 NA Intergenic Intergenic -1558 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak2_116_101_-0.092270942634717_6.62628987065414_0.328589711479888 chrX 164013607 164015090 + 0.328589711479888 NA intron (NM_181315, intron 2 of 7) B1_Mur4|SINE|Alu 13662 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_122_96_0.0518823276407652_6.62585400600751_0.328589711479863-3 chr6 113604368 113605505 + 0.328589711479863 NA intron (NM_133937, intron 1 of 2) CpG 164 NM_133937 101314 Mm.485793 NM_133937 ENSMUSG00000033940 Brk1 6720456B07Rik|AW011779 BRICK1, SCAR/WAVE actin-nucleating complex subunit protein-coding common_peak1_122_96_0.0518823276407652_6.62585400600751_0.328589711479863 chr1 157411573 157412603 + 0.328589711479863 NA promoter-TSS (NR_027984) promoter-TSS (NR_027984) -264 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak1_123_96_0.0634817177924099_6.63165370108333_0.328589711479863 chr7 132930838 132932532 + 0.328589711479863 NA intron (NM_207302, intron 1 of 9) CpG 543 NM_001362198 360216 Mm.389984 NM_207302 ENSMUSG00000030967 Zranb1 9330160G10Rik|D7Wsu87e|Gm1956|Trabid zinc finger, RAN-binding domain containing 1 protein-coding common_peak2_123_96_0.0634817177924099_6.63165370108333_0.328589711479863 chr4 129741530 129742324 + 0.328589711479863 NA non-coding (NR_045036, exon 1 of 12) non-coding (NR_045036, exon 1 of 12) 376 NM_011317 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak1_122_96_0.0518823276407652_6.62585400600751_0.328589711479863-2 chr17 79352775 79354397 + 0.328589711479863 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 1505 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-3 chr16 85901335 85901855 + 0.328563898667783 NA promoter-TSS (NM_011782) promoter-TSS (NM_011782) -470 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-4 chr2 27010042 27010695 + 0.328563898667783 NA TTS (NM_001290463) TTS (NM_001290463) 442 NM_001243239 381356 Mm.150270 NM_029862 ENSMUSG00000015488 Cacfd1 5930434B04Rik|mFwe calcium channel flower domain containing 1 protein-coding common_peak2_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-3 chr11 69921854 69922451 + 0.328563898667783 NA promoter-TSS (NM_001166595) promoter-TSS (NM_001166595) -194 NM_001166593 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak2_44_34_0.0820851304816177_5.17032558218578_0.328563898667783 chr10 60804992 60805547 + 0.328563898667783 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 26312 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-4 chr14 76699241 76699880 + 0.328563898667783 NA Intergenic Intergenic 21992 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-5 chr5 21056299 21056723 + 0.328563898667783 NA promoter-TSS (NM_001356591) promoter-TSS (NM_001356591) -600 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-6 chr7 67968728 67969144 + 0.328563898667783 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 16679 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-6 chr7 109613859 109614713 + 0.328563898667783 NA intron (NM_001001326, intron 1 of 19) B1_Mus2|SINE|Alu 2282 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-5 chr5 103366046 103366480 + 0.328563898667783 NA Intergenic Intergenic 19665 NR_152117 75519 Mm.416851 NR_152117 ENSMUSG00000105426 1700021F02Rik Gm42618 RIKEN cDNA 1700021F02 gene ncRNA common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-2 chr15 81584665 81585063 + 0.328563898667783 NA Intergenic Intergenic -1350 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783 chr10 127211189 127211643 + 0.328563898667783 NA exon (NM_054097, exon 1 of 10) exon (NM_054097, exon 1 of 10) 206 NM_054097 117150 Mm.22682 NM_054097 ENSMUSG00000025417 Pip4k2c Pip5k2c phosphatidylinositol-5-phosphate 4-kinase, type II, gamma protein-coding common_peak1_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-7 chr9 64017346 64017971 + 0.328563898667783 NA intron (NM_008542, intron 1 of 3) intron (NM_008542, intron 1 of 3) 4401 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_44_34_0.0820851304816177_5.17032558218578_0.328563898667783-2 chr10 78722578 78723102 + 0.328563898667783 NA Intergenic Intergenic -4547 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-3 chr18 75860633 75861183 + 0.328563898667777 NA intron (NM_145356, intron 1 of 4) intron (NM_145356, intron 1 of 4) 40730 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding common_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-5 chr19 8888095 8888646 + 0.328563898667777 NA promoter-TSS (NM_025463) promoter-TSS (NM_025463) 400 NR_027866 67531 Mm.475113 NR_027866 5730408K05Rik 2610018C13Rik RIKEN cDNA 5730408K05 gene ncRNA common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-6 chr6 108709912 108710413 + 0.328563898667777 NA Intergenic Intergenic -49228 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777 chr11 78363949 78364285 + 0.328563898667777 NA intron (NM_008238, intron 6 of 8) MIR3|SINE|MIR 17407 NM_001313987 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-5 chr4 43560513 43561143 + 0.328563898667777 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 1755 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding unique_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777 chr19 28674091 28674660 + 0.328563898667777 NA intron (NM_175459, intron 1 of 10) intron (NM_175459, intron 1 of 10) -3849 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-2 chr1 155039812 155040251 + 0.328563898667777 NA Intergenic Intergenic 43233 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-2 chr13 72199410 72199997 + 0.328563898667777 NA Intergenic Intergenic -235980 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding unique_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777 chr5 52910215 52911102 + 0.328563898667777 NA Intergenic Intergenic 76523 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-4 chr14 25477329 25477774 + 0.328563898667777 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 18366 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-4 chr3 88579621 88580072 + 0.328563898667777 NA 5' UTR (NM_025448, exon 1 of 5) 5' UTR (NM_025448, exon 1 of 5) 238 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|SSR-beta|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak2_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-7 chr7 89517769 89518026 + 0.328563898667777 NA promoter-TSS (NM_029614) promoter-TSS (NM_029614) 24 NM_001360755 76453 Mm.250438 NM_029614 ENSMUSG00000039405 Prss23 2310046G15Rik|4930479H08Rik|AI790574|Spuve protease, serine 23 protein-coding common_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-3 chr10 14463317 14464129 + 0.328563898667777 NA intron (NM_001002268, intron 4 of 24) intron (NM_001002268, intron 4 of 24) 81313 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding common_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777 chr1 75392652 75393082 + 0.328563898667777 NA intron (NM_001085370, intron 4 of 38) intron (NM_001085370, intron 4 of 38) -7218 NM_001173477 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding common_peak1_40_37_-0.169912966269903_5.16297103030863_0.328563898667777-6 chr9 72661887 72662166 + 0.328563898667777 NA promoter-TSS (NM_010890) promoter-TSS (NM_010890) -305 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_241_190_0.0438269533673319_7.59934230471941_0.328525590177286 chr8 4324002 4326011 + 0.328525590177286 NA promoter-TSS (NM_010485) promoter-TSS (NM_010485) 94 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding common_peak1_233_197_-0.0562572003160744_7.60122801992157_0.328525590177236 chr1 58392394 58394337 + 0.328525590177236 NA intron (NM_025824, intron 1 of 11) CpG 229 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak1_234_198_-0.0574163776342047_7.60791643172655_0.328384209351583 chr8 73351544 73353513 + 0.328384209351583 NA 5' UTR (NM_010687, exon 1 of 15) 5' UTR (NM_010687, exon 1 of 15) 1012 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_178_140_0.049726219937714_7.16441446236765_0.328365220137484-2 chr2 32961751 32963599 + 0.328365220137484 NA promoter-TSS (NR_002898) promoter-TSS (NR_002898) -626 NR_002898 104367 Mm.250030 NR_002898 ENSMUSG00000065124 Snora65 MBII-351|Rnu65 small nucleolar RNA, H/ACA box 65 snoRNA common_peak1_178_140_0.049726219937714_7.16441446236765_0.328365220137484 chr11 77811146 77813062 + 0.328365220137484 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 10806 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_178_140_0.049726219937714_7.16441446236765_0.328365220137484 chr1 10037311 10038683 + 0.328365220137484 NA promoter-TSS (NM_026493) promoter-TSS (NM_026493) 162 NR_102282 26754 Mm.402384 NM_013715 ENSMUSG00000025917 Cops5 AI303502|CSN5|Jab1|Mov34|Sgn5 COP9 signalosome subunit 5 protein-coding common_peak2_118_102_-0.0820655998458806_6.64546772726028_0.328312670805966 chr4 114986574 114987685 + 0.328312670805966 NA promoter-TSS (NM_025647) promoter-TSS (NM_025647) 99 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding common_peak1_124_97_0.0601909372177349_6.64480531272408_0.328312670805942 chr8 61339873 61341059 + 0.328312670805942 NA intron (NM_021506, intron 4 of 11) intron (NM_021506, intron 4 of 11) -51594 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-7 chr2 60636507 60636786 + 0.328191099940267 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 37047 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267 chr10 17362620 17362876 + 0.328191099940267 NA Intergenic Intergenic -266966 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-4 chr13 21974655 21975009 + 0.328191099940267 NA Intergenic Intergenic -6349 NM_001162928 195236 Mm.204664 NM_001162928 ENSMUSG00000016982 Pom121l2 Gm24 POM121 membrane glycoprotein-like 2 (rat) protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-14 chr19 17387544 17387998 + 0.328191099940267 NA Intergenic Intergenic -6272 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-25 chr9 104321018 104321283 + 0.328191099940267 NA intron (NM_207668, intron 4 of 10) intron (NM_207668, intron 4 of 10) 16572 NM_019807 56318 Mm.19941 NM_019807 ENSMUSG00000032561 Acpp 5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal acid phosphatase, prostate protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-11 chr17 88631693 88632044 + 0.328191099940267 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 5313 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-7 chr14 61647277 61647617 + 0.328191099940267 NA intron (NR_028264, intron 1 of 6) intron (NR_028264, intron 1 of 6) -15337 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-8 chr15 38929036 38929297 + 0.328191099940267 NA Intergenic Intergenic -4743 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-12 chr8 124959234 124959449 + 0.328191099940267 NA Intergenic Intergenic -10087 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-20 chr5 135933152 135933376 + 0.328191099940267 NA intron (NM_018871, intron 1 of 1) intron (NM_018871, intron 1 of 1) 1377 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-2 chr12 79191512 79191807 + 0.328191099940267 NA promoter-TSS (NM_001362269) promoter-TSS (NM_001362269) 196 NM_001362270 17252 Mm.291799 NM_021557 ENSMUSG00000066441 Rdh11 2610319N22Rik|AI428145|AU045252|Arsdr1|C85936|CGI-82|HCBP12|M42C60|Mdt1|Psdr1|SCALD|UBE-1c1|Ube-1c|ralR1 retinol dehydrogenase 11 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-8 chr3 75949007 75949261 + 0.328191099940267 NA intron (NM_001291069, intron 1 of 15) intron (NM_001291069, intron 1 of 15) 7815 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-11 chr6 72512923 72513112 + 0.328191099940267 NA Intergenic Intergenic -31374 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-19 chr5 112295583 112295797 + 0.328191099940267 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 18999 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-2 chr12 54620235 54620549 + 0.328191099940267 NA Intergenic Intergenic 25620 NR_035439 100316682 NR_035439 ENSMUSG00000106344 Mir1892 Mirn1892|mir-1892|mmu-mir-1892 microRNA 1892 ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-2 chr1 183144258 183144523 + 0.328191099940267 NA intron (NM_001278219, intron 2 of 8) intron (NM_001278219, intron 2 of 8) 3167 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-7 chr7 102064745 102065047 + 0.328191099940267 NA promoter-TSS (NM_001286689) promoter-TSS (NM_001286689) 269 NM_029211 75212 Mm.101141 NM_029211 ENSMUSG00000070426 Rnf121 4930544L10Rik ring finger protein 121 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-5 chr13 113552245 113552622 + 0.328191099940267 NA Intergenic Intergenic -49589 NR_045501 70917 Mm.491036 NR_045501 ENSMUSG00000114790 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-6 chr16 86403679 86404134 + 0.328191099940267 NA Intergenic Intergenic 402607 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-3 chr13 19396045 19396235 + 0.328191099940267 NA promoter-TSS (NM_024270) promoter-TSS (NM_024270) -327 NM_001347485 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-5 chr16 86815971 86816283 + 0.328191099940267 NA Intergenic Intergenic -9614 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-7 chr17 62393754 62394137 + 0.328191099940267 NA Intergenic Intergenic 487372 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-9 chr6 89009206 89009610 + 0.328191099940267 NA Intergenic (CAAA)n|Simple_repeat|Simple_repeat -86702 NR_134978 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-3 chr10 7258054 7258303 + 0.328191099940267 NA Intergenic Intergenic -45941 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-5 chr15 85701876 85702102 + 0.328191099940267 NA Intergenic Intergenic -1784 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-6 chr14 20764893 20765304 + 0.328191099940267 NA intron (NM_001039139, intron 8 of 18) intron (NM_001039139, intron 8 of 18) 28990 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-4 chr2 127270306 127270560 + 0.328191099940267 NA 5' UTR (NM_139308, exon 1 of 8) 5' UTR (NM_139308, exon 1 of 8) 204 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-10 chr6 114886945 114887382 + 0.328191099940267 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 34658 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-4 chr13 97929326 97929658 + 0.328191099940267 NA exon (NM_012026, exon 35 of 36) exon (NM_012026, exon 35 of 36) 178380 NR_152263 111365222 Mm.440079 NR_152263 Eyelinc18 - uncharacterized EyeLinc18 ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-15 chr2 60641327 60641635 + 0.328191099940267 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 32212 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-5 chr3 107743952 107744222 + 0.328191099940267 NA intron (NM_007778, intron 8 of 8) intron (NM_007778, intron 8 of 8) 16382 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-22 chr6 91474683 91474908 + 0.328191099940267 NA intron (NM_028766, intron 1 of 11) intron (NM_028766, intron 1 of 11) 1044 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267 chr1 156070880 156071159 + 0.328191099940267 NA Intergenic Intergenic 30158 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-3 chr11 117232732 117233023 + 0.328191099940267 NA intron (NM_001113486, intron 2 of 11) (TTTC)n|Simple_repeat|Simple_repeat 33216 NM_001113486 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-10 chr16 95990566 95990821 + 0.328191099940267 NA intron (NM_019537, intron 1 of 6) CpG 267 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-8 chr3 31038358 31038604 + 0.328191099940267 NA promoter-TSS (NR_105975) promoter-TSS (NR_105975) -485 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-11 chr8 103231947 103232528 + 0.328191099940267 NA Intergenic Intergenic 115297 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-21 chr6 72551793 72552121 + 0.328191099940267 NA intron (NM_001271395, intron 1 of 9) ID_B1|SINE|B4 2310 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267 chr10 82855690 82856071 + 0.328191099940267 NA intron (NM_001042523, intron 1 of 14) intron (NM_001042523, intron 1 of 14) -3326 NM_001042513 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-12 chr8 121584992 121585372 + 0.328191099940267 NA Intergenic Intergenic -5286 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-13 chr19 9948047 9948495 + 0.328191099940267 NA Intergenic Intergenic -32329 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-9 chr4 129513815 129514013 + 0.328191099940267 NA exon (NM_010807, exon 1 of 2) exon (NM_010807, exon 1 of 2) 333 NM_010807 17357 Mm.424974 NM_010807 ENSMUSG00000047945 Marcksl1 AL022768|AW215397|AW536807|D4Bc1|F52|MacMARCKS|Macs2|Macs3|Mlp|Mrp MARCKS-like 1 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-18 chr4 126111938 126112303 + 0.328191099940267 NA intron (NM_028800, intron 1 of 10) MIRb|SINE|MIR 8163 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-16 chr2 166793361 166793601 + 0.328191099940267 NA promoter-TSS (NM_023815) promoter-TSS (NM_023815) -286 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-13 chr9 67042200 67042595 + 0.328191099940267 NA intron (NM_001164249, intron 2 of 8) MIR|SINE|MIR 1474 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-24 chr9 69472662 69472917 + 0.328191099940267 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 15845 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-9 chr15 76219615 76220046 + 0.328191099940267 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) -4157 NR_035463 100316774 NR_035463 ENSMUSG00000087899 Mir1942 mmu-mir-1942 microRNA 1942 ncRNA unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-3 chr13 3742688 3743005 + 0.328191099940267 NA Intergenic Intergenic 61472 NM_027416 70405 Mm.20079 NM_027416 ENSMUSG00000063130 Calml3 2310068O22Rik|AI326174 calmodulin-like 3 protein-coding unique_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-2 chr10 120629242 120629483 + 0.328191099940267 NA Intergenic Intergenic -136370 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-17 chr3 97158874 97159147 + 0.328191099940267 NA 5' UTR (NM_019800, exon 1 of 10) 5' UTR (NM_019800, exon 1 of 10) 233 NM_019800 66659 Mm.101368 NM_019800 ENSMUSG00000028093 Acp6 5730559A09Rik|ACPL1|AU022842|mPACPL1 acid phosphatase 6, lysophosphatidic protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-10 chr5 113772782 113773017 + 0.328191099940267 NA promoter-TSS (NM_016926) promoter-TSS (NM_016926) 87 NM_025526 66383 Mm.29497 NM_025526 ENSMUSG00000025825 Iscu 2310020H20Rik|AA407971|Nifu|Nifun iron-sulfur cluster assembly enzyme protein-coding unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267 chr10 31466675 31467031 + 0.328191099940267 NA Intergenic Intergenic -20895 NM_001359366 21987 Mm.439966 NM_009413 ENSMUSG00000000296 Tpd52l1 D53 tumor protein D52-like 1 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-23 chr8 111597708 111597982 + 0.328191099940267 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 32477 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding unique_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-6 chr5 63953321 63953544 + 0.328191099940267 NA intron (NM_145923, intron 1 of 6) intron (NM_145923, intron 1 of 6) 15465 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding common_peak2_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-12 chr18 60624589 60624893 + 0.328191099940267 NA promoter-TSS (NM_177340) promoter-TSS (NM_177340) -436 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-4 chr15 27923411 27923605 + 0.328191099940267 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 102340 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_17_17_-0.271158773196363_4.03434561484413_0.328191099940267-6 chr19 5840617 5840878 + 0.328191099940267 NA non-coding (NR_131212, exon 1 of 1) non-coding (NR_131212, exon 1 of 1) 4731 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-29 chr9 47608118 47608561 + 0.328191099940264 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 77987 NM_001025600 54725 Mm.234832 NM_018770 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-27 chr7 27257475 27257694 + 0.328191099940264 NA 3' UTR (NM_133770, exon 15 of 15) 3' UTR (NM_133770, exon 15 of 15) -1177 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-25 chr7 84087889 84088162 + 0.328191099940264 NA Intergenic Intergenic -1520 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-3 chr10 78337455 78338056 + 0.328191099940264 NA intron (NM_053014, intron 1 of 9) B3A|SINE|B2 2452 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-16 chr19 20389121 20389399 + 0.328191099940264 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 1411 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-6 chr11 3370649 3370859 + 0.328191099940264 NA intron (NM_010718, intron 2 of 15) intron (NM_010718, intron 2 of 15) 650 NM_001361623 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-13 chr2 178455311 178455666 + 0.328191099940264 NA intron (NM_198656, intron 3 of 14) intron (NM_198656, intron 3 of 14) 24973 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-5 chr11 6474552 6474909 + 0.328191099940264 NA 3' UTR (NM_011221, exon 1 of 1) 3' UTR (NM_011221, exon 1 of 1) 1346 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-15 chr17 88256495 88256768 + 0.328191099940264 NA Intergenic Intergenic 131119 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-8 chr12 110088305 110088676 + 0.328191099940264 NA Intergenic Intergenic 69583 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-21 chr7 133006090 133006306 + 0.328191099940264 NA intron (NM_001347623, intron 1 of 8) intron (NM_001347623, intron 1 of 8) 9049 NM_001170744 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-8 chr13 4771134 4771461 + 0.328191099940264 NA Intergenic Intergenic -162133 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-13 chr18 60734581 60734783 + 0.328191099940264 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) -1541 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-2 chr1 132207391 132207715 + 0.328191099940264 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) 9465 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-4 chr2 163350487 163350951 + 0.328191099940264 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 47254 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-9 chr13 67081507 67081821 + 0.328191099940264 NA promoter-TSS (NM_001012448) promoter-TSS (NM_001012448) -119 NM_001292066 432769 Mm.458849 NM_001012325 ENSMUSG00000058883 Zfp708 Rslcan11 zinc finger protein 708 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-18 chr4 139310440 139310714 + 0.328191099940264 NA promoter-TSS (NM_025337) promoter-TSS (NM_025337) 131 NR_151463 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-11 chr15 98932799 98933090 + 0.328191099940264 NA intron (NM_011654, intron 2 of 3) intron (NM_011654, intron 2 of 3) 1446 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-9 chr14 54426609 54426820 + 0.328191099940264 NA promoter-TSS (NM_026851) promoter-TSS (NM_026851) -195 NM_026851 68836 Mm.248163 NM_026851 ENSMUSG00000010406 Mrpl52 1110047B07Rik mitochondrial ribosomal protein L52 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-10 chr15 59387133 59387361 + 0.328191099940264 NA intron (NM_001164604, intron 2 of 4) intron (NM_001164604, intron 2 of 4) 13049 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-20 chr7 112290481 112290723 + 0.328191099940264 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 64766 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-21 chr5 36663823 36664102 + 0.328191099940264 NA intron (NM_001081232, intron 2 of 8) intron (NM_001081232, intron 2 of 8) 32059 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-10 chr15 4027122 4027359 + 0.328191099940264 NA non-coding (NR_028266, exon 1 of 2) non-coding (NR_028266, exon 1 of 2) 166 NR_028266 414066 Mm.394461 NR_028266 BC037032 - cDNA Sequence BC037032 ncRNA common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-7 chr11 113269621 113269984 + 0.328191099940264 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -60133 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-14 chr4 57558663 57558961 + 0.328191099940264 NA Intergenic Intergenic -9436 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-11 chr14 76509310 76509559 + 0.328191099940264 NA Intergenic Intergenic 4924 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-9 chr7 80754060 80754411 + 0.328191099940264 NA intron (NM_016721, intron 11 of 37) intron (NM_016721, intron 11 of 37) 49096 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-2 chr10 127662538 127662870 + 0.328191099940264 NA intron (NM_001122895, intron 5 of 5) intron (NM_001122895, intron 5 of 5) 3999 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-16 chr5 139200715 139200972 + 0.328191099940264 NA intron (NM_001359496, intron 1 of 20) CpG 206 NM_001359494 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-16 chr5 105501097 105501387 + 0.328191099940264 NA Intergenic Intergenic -18229 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-26 chr6 128200993 128201265 + 0.328191099940264 NA Intergenic Intergenic -17326 NR_077223 330427 Mm.426356 NR_077223 ENSMUSG00000107879 9330102E08Rik - RIKEN cDNA 9330102E08 gene ncRNA common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-20 chr5 43868816 43869108 + 0.328191099940264 NA exon (NM_007646, exon 1 of 8) exon (NM_007646, exon 1 of 8) 153 NM_007646 12494 Mm.249873 NM_007646 ENSMUSG00000029084 Cd38 ADPRC 1|Cd38-rs1|I-19 CD38 antigen protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-19 chr5 31153728 31153992 + 0.328191099940264 NA intron (NM_001310528, intron 1 of 7) intron (NM_001310528, intron 1 of 7) 320 NM_001294324 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-3 chr11 74570761 74571020 + 0.328191099940264 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 19268 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-26 chr7 99535670 99535982 + 0.328191099940264 NA intron (NM_178220, intron 1 of 14) CpG 340 NM_177231 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-10 chr14 54876342 54876577 + 0.328191099940264 NA exon (NM_001167908, exon 2 of 2) exon (NM_001167908, exon 2 of 2) 1079 NM_001167908 105651 Mm.297365 NM_001167908 ENSMUSG00000072494 Ppp1r3e A630071A11Rik|AW049239|Gm1211 protein phosphatase 1, regulatory (inhibitor) subunit 3E protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-7 chr13 41707323 41707618 + 0.328191099940264 NA Intergenic Intergenic 101254 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-5 chr11 8582472 8582907 + 0.328191099940264 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 81846 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-11 chr16 20548733 20549041 + 0.328191099940264 NA promoter-TSS (NR_030670) promoter-TSS (NR_030670) 284 NM_013852 27406 Mm.27135 NM_013852 ENSMUSG00000003234 Abcf3 AI326318|AU016058|BB119416 ATP-binding cassette, sub-family F (GCN20), member 3 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-24 chr5 140772650 140772894 + 0.328191099940264 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 48645 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-17 chr8 33672682 33672960 + 0.328191099940264 NA intron (NM_010344, intron 4 of 12) intron (NM_010344, intron 4 of 12) 19583 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-8 chr12 31059873 31060164 + 0.328191099940264 NA Intergenic Intergenic -13950 NM_027828 104943 Mm.248938 NM_027828 ENSMUSG00000036136 Fam110c 9030611O19Rik|AU019489 family with sequence similarity 110, member C protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-8 chr13 63239557 63239813 + 0.328191099940264 NA promoter-TSS (NR_110521) promoter-TSS (NR_110521) -344 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-21 chr5 148950357 148950628 + 0.328191099940264 NA intron (NR_040686, intron 1 of 2) intron (NR_040686, intron 1 of 2) 242 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-7 chr12 82470144 82470571 + 0.328191099940264 NA Intergenic AT_rich|Low_complexity|Low_complexity -146568 NM_001310478 50779 Mm.126176 NM_015812 ENSMUSG00000021219 Rgs6 - regulator of G-protein signaling 6 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-2 chr11 12424896 12425330 + 0.328191099940264 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) -12973 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-4 chr11 98357801 98358059 + 0.328191099940264 NA promoter-TSS (NM_021547) promoter-TSS (NM_021547) 353 NR_045477 69338 Mm.398308 NR_045477 ENSMUSG00000085944 1700003D09Rik - RIKEN cDNA 1700003D09 gene ncRNA common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-9 chr17 24644577 24644804 + 0.328191099940264 NA intron (NM_023055, intron 2 of 6) intron (NM_023055, intron 2 of 6) 267 NM_023449 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-17 chr5 147292253 147292509 + 0.328191099940264 NA Intergenic Intergenic -9083 NR_105854 102465309 NR_105854 ENSMUSG00000098687 Mir7k Gm27814|Mirlet7k|mmu-let-7k microRNA 7k ncRNA common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-27 chr7 113206807 113207024 + 0.328191099940264 NA promoter-TSS (NM_007489) promoter-TSS (NM_007489) -550 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-18 chr8 110822313 110822684 + 0.328191099940264 NA intron (NM_133953, intron 15 of 25) intron (NM_133953, intron 15 of 25) 16100 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-25 chr5 144953752 144953991 + 0.328191099940264 NA intron (NM_001038627, intron 1 of 17) intron (NM_001038627, intron 1 of 17) 11959 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-18 chr4 150508513 150508796 + 0.328191099940264 NA intron (NM_001085492, intron 8 of 22) intron (NM_001085492, intron 8 of 22) 143520 NM_001355737 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-2 chr10 19153607 19153814 + 0.328191099940264 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) 11961 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-24 chr8 106011585 106011797 + 0.328191099940264 NA promoter-TSS (NM_028038) promoter-TSS (NM_028038) -205 NM_028038 71986 Mm.307515 NM_028038 ENSMUSG00000045538 Ddx28 2410004K13Rik|AI449652|Mddx28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-8 chr14 25475265 25475465 + 0.328191099940264 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 16180 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-7 chr5 53103381 53103850 + 0.328191099940264 NA Intergenic Intergenic 54262 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-19 chr7 16209583 16209816 + 0.328191099940264 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 12294 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-13 chr17 29097006 29097234 + 0.328191099940264 NA intron (NM_007669, intron 1 of 2) intron (NM_007669, intron 1 of 2) 3351 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-15 chr2 32153804 32154028 + 0.328191099940264 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 2768 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-26 chr9 7872487 7872802 + 0.328191099940264 NA intron (NM_007464, intron 1 of 8) CpG 526 NM_007464 11796 Mm.2026 NM_007464 ENSMUSG00000032000 Birc3 AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2 baculoviral IAP repeat-containing 3 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-6 chr11 84129141 84129411 + 0.328191099940264 NA intron (NM_172562, intron 1 of 15) intron (NM_172562, intron 1 of 15) 292 NM_172562 217031 Mm.45159 NM_172562 ENSMUSG00000018651 Tada2a AV319371|D030022J10Rik|Tada2l transcriptional adaptor 2A protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-22 chr8 73198846 73199057 + 0.328191099940264 NA intron (NM_001317391, intron 3 of 15) intron (NM_001317391, intron 3 of 15) 154589 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-19 chr8 121832579 121832928 + 0.328191099940264 NA Intergenic Intergenic -3184 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-15 chr5 114719395 114719786 + 0.328191099940264 NA promoter-TSS (NR_105995) promoter-TSS (NR_105995) 75 NR_105995 102465622 NR_105995 ENSMUSG00000098656 Mir7028 Gm27674|mmu-mir-7028 microRNA 7028 ncRNA unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-7 chr12 86893548 86893859 + 0.328191099940264 NA Intergenic Intergenic -8889 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-5 chr12 85958272 85958645 + 0.328191099940264 NA intron (NM_001347395, intron 29 of 32) intron (NM_001347395, intron 29 of 32) 120583 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-23 chr8 94954039 94954327 + 0.328191099940264 NA Intergenic Intergenic -22926 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding unique_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264 chr10 79989982 79990277 + 0.328191099940264 NA intron (NM_007725, intron 1 of 6) intron (NM_007725, intron 1 of 6) 1529 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-29 chr9 120110397 120110632 + 0.328191099940264 NA exon (NM_144793, exon 1 of 7) exon (NM_144793, exon 1 of 7) 115 NM_144793 208638 Mm.236656 NM_144793 ENSMUSG00000032519 Slc25a38 AV019094|BC010801|appoptosin solute carrier family 25, member 38 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-28 chr7 139296782 139297073 + 0.328191099940264 NA Intergenic Intergenic 48445 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-9 chr13 63657638 63657901 + 0.328191099940264 NA Intergenic Intergenic 76529 NR_126476 75522 Mm.54259 NR_126476 ENSMUSG00000113825 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-18 chr6 40325701 40326003 + 0.328191099940264 NA intron (NM_023538, intron 1 of 15) intron (NM_023538, intron 1 of 15) 374 NM_023538 69923 Mm.32840 NM_023538 ENSMUSG00000029916 Agk 2610037M15Rik|6720408I04Rik|AI465370|Mulk acylglycerol kinase protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-12 chr2 158217923 158218237 + 0.328191099940264 NA intron (NM_001131021, intron 2 of 15) intron (NM_001131021, intron 2 of 15) 11144 NM_001131021 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-14 chr2 152680483 152681004 + 0.328191099940264 NA intron (NM_010376, intron 2 of 11) intron (NM_010376, intron 2 of 11) -6405 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding unique_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-3 chr14 20833933 20834180 + 0.328191099940264 NA Intergenic Intergenic -2606 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-16 chr3 104794136 104794345 + 0.328191099940264 NA TTS (NM_008619) TTS (NM_008619) 5206 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-22 chr5 64810811 64811105 + 0.328191099940264 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 7435 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-12 chr19 28670919 28671401 + 0.328191099940264 NA intron (NM_175459, intron 1 of 10) intron (NM_175459, intron 1 of 10) -7064 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-20 chr5 5747626 5748153 + 0.328191099940264 NA intron (NM_027399, intron 1 of 4) intron (NM_027399, intron 1 of 4) 1428 NM_027399 70358 Mm.85429 NM_027399 ENSMUSG00000015652 Steap1 2410007B19Rik|Prss24|Steap six transmembrane epithelial antigen of the prostate 1 protein-coding unique_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-2 chr11 69412095 69412368 + 0.328191099940264 NA intron (NM_001017426, intron 1 of 22) intron (NM_001017426, intron 1 of 22) 1444 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-8 chr5 142630648 142630907 + 0.328191099940264 NA intron (NM_178398, intron 1 of 11) intron (NM_178398, intron 1 of 11) 1193 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-12 chr16 57685487 57685807 + 0.328191099940264 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 69090 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-28 chr9 108507519 108507818 + 0.328191099940264 NA promoter-TSS (NM_133794) promoter-TSS (NM_133794) -337 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-15 chr4 99715673 99715922 + 0.328191099940264 NA intron (NM_001081264, intron 1 of 14) CpG 167 NM_001081264 320438 Mm.32408 NM_001081264 ENSMUSG00000073792 Alg6 E230028F23Rik asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-23 chr5 104425481 104425797 + 0.328191099940264 NA Intergenic Intergenic -9472 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-29 chr9 96864021 96864310 + 0.328191099940264 NA intron (NM_001289645, intron 1 of 6) intron (NM_001289645, intron 1 of 6) 25309 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-2 chr1 89264952 89265319 + 0.328191099940264 NA Intergenic Intergenic 140998 NR_040482 77331 Mm.374962 NR_040482 ENSMUSG00000099938 C030007H22Rik - RIKEN cDNA C030007H22 gene ncRNA common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-12 chr15 100088604 100088847 + 0.328191099940264 NA intron (NR_037311, intron 2 of 3) intron (NR_037311, intron 2 of 3) 50061 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264 chr1 43252710 43252945 + 0.328191099940264 NA Intergenic Intergenic -56066 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-4 chr18 75901845 75902200 + 0.328191099940264 NA intron (NM_145356, intron 2 of 4) intron (NM_145356, intron 2 of 4) 81844 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-6 chr12 24708249 24708511 + 0.328191099940264 NA exon (NM_009104, exon 1 of 10) exon (NM_009104, exon 1 of 10) 126 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-2 chr10 67097807 67098176 + 0.328191099940264 NA Intergenic Intergenic -1003 NM_178606 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-27 chr9 102671975 102672282 + 0.328191099940264 NA Intergenic Intergenic -45676 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-10 chr17 80207621 80207905 + 0.328191099940264 NA promoter-TSS (NR_036615) promoter-TSS (NR_036615) -458 NM_001195485 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-4 chr11 3580774 3581116 + 0.328191099940264 NA Intergenic Intergenic -41653 NM_001284428 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-17 chr5 140767128 140767409 + 0.328191099940264 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 43141 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-6 chr12 110088268 110088587 + 0.328191099940264 NA Intergenic Intergenic 69646 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-14 chr17 70719443 70719701 + 0.328191099940264 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 127205 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-22 chr6 128200962 128201252 + 0.328191099940264 NA Intergenic Intergenic -17304 NR_077223 330427 Mm.426356 NR_077223 ENSMUSG00000107879 9330102E08Rik - RIKEN cDNA 9330102E08 gene ncRNA unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-9 chr17 62505010 62505338 + 0.328191099940264 NA Intergenic Intergenic 376143 NM_207654 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-3 chr10 67755101 67755397 + 0.328191099940264 NA Intergenic Intergenic 157413 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264 chr1 91300130 91300466 + 0.328191099940264 NA intron (NM_016717, intron 1 of 11) intron (NM_016717, intron 1 of 11) 1960 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-25 chr8 111596906 111597156 + 0.328191099940264 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 33291 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-4 chr10 117793021 117793280 + 0.328191099940264 NA promoter-TSS (NM_134010) promoter-TSS (NM_134010) -445 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-5 chr3 145729413 145729666 + 0.328191099940264 NA Intergenic Intergenic -29153 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-17 chr2 51972411 51972724 + 0.328191099940264 NA intron (NM_019401, intron 1 of 7) (CAA)n|Simple_repeat|Simple_repeat 641 NM_001141949 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-3 chr10 27249302 27249639 + 0.328191099940264 NA intron (NM_008481, intron 14 of 63) intron (NM_008481, intron 14 of 63) -140396 NR_131034 75855 Mm.402080 NR_131034 ENSMUSG00000101636 4930579H20Rik - RIKEN cDNA 4930579H20 gene ncRNA common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-14 chr19 16948948 16949182 + 0.328191099940264 NA Intergenic Intergenic -7053 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-16 chr2 38533830 38534093 + 0.328191099940264 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 22085 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-6 chr4 144586240 144586454 + 0.328191099940264 NA Intergenic Intergenic -21213 NM_001085542 627085 Mm.457899 NM_001085542 ENSMUSG00000078506 Gm13124 - predicted gene 13124 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-7 chr13 29501302 29501776 + 0.328191099940264 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 354134 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-20 chrX 73465350 73465537 + 0.328191099940264 NA Intergenic Intergenic -6414 NM_207104 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264 chr1 34849981 34850222 + 0.328191099940264 NA intron (NM_145516, intron 1 of 7) CpG 112 NM_001357425 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-23 chr7 64251414 64251831 + 0.328191099940264 NA intron (NM_001039104, intron 26 of 26) B1F1|SINE|Alu -1523 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-14 chr2 38536943 38537240 + 0.328191099940264 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 25215 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-6 chr11 86484026 86484339 + 0.328191099940264 NA promoter-TSS (NM_029788) promoter-TSS (NM_029788) -475 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-10 chr18 36413431 36413851 + 0.328191099940264 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 40854 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264 chr1 91085231 91085603 + 0.328191099940264 NA intron (NM_008515, intron 7 of 22) intron (NM_008515, intron 7 of 22) 31973 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-3 chr11 49077032 49077269 + 0.328191099940264 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) 563 NM_001271677 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-4 chr11 113565354 113565647 + 0.328191099940264 NA intron (NM_027216, intron 1 of 9) intron (NM_027216, intron 1 of 9) 315 NM_001166503 69806 Mm.341021 NM_027216 ENSMUSG00000041654 Slc39a11 1810074D23Rik solute carrier family 39 (metal ion transporter), member 11 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264 chr10 25790762 25790963 + 0.328191099940264 NA intron (NR_045349, intron 2 of 4) intron (NR_045349, intron 2 of 4) 46575 NR_045349 73803 Mm.258921 NR_045349 ENSMUSG00000112444 4930401C15Rik - RIKEN cDNA 4930401C15 gene ncRNA unique_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264 chr1 184882593 184882855 + 0.328191099940264 NA exon (NM_178692, exon 1 of 2) exon (NM_178692, exon 1 of 2) 312 NM_178692 226777 Mm.169542 NM_178692 ENSMUSG00000039349 C130074G19Rik - RIKEN cDNA C130074G19 gene protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-13 chr2 26140797 26141170 + 0.328191099940264 NA promoter-TSS (NM_001256521) promoter-TSS (NM_001256521) -477 NM_001256521 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-11 chr17 88038513 88038797 + 0.328191099940264 NA intron (NM_001081034, intron 1 of 22) intron (NM_001081034, intron 1 of 22) 26277 NM_001348248 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding unique_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-4 chr19 58102204 58102575 + 0.328191099940264 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 51222 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-15 chr2 137720176 137720392 + 0.328191099940264 NA Intergenic Intergenic -536300 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-11 chr18 39379877 39380251 + 0.328191099940264 NA Intergenic Intergenic 107181 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-4 chr10 79554533 79554772 + 0.328191099940264 NA intron (NM_001316699, intron 1 of 13) CpG 476 NM_001316699 70427 Mm.334193 NM_027422 ENSMUSG00000042570 Mier2 2700087H15Rik|mKIAA1193 MIER family member 2 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264 chr11 3893647 3894100 + 0.328191099940264 NA intron (NM_026150, intron 1 of 2) (CAAAAA)n|Simple_repeat|Simple_repeat 1253 NM_026150 67430 Mm.347950 NM_026150 ENSMUSG00000020434 4921536K21Rik AV043724 RIKEN cDNA 4921536K21 gene protein-coding common_peak2_20_15_0.119589675592624_4.05979483779631_0.328191099940264-5 chr10 95514498 95514721 + 0.328191099940264 NA promoter-TSS (NM_080560) promoter-TSS (NM_080560) -553 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding unique_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-3 chr18 21224067 21224390 + 0.328191099940264 NA intron (NM_001033445, intron 2 of 5) intron (NM_001033445, intron 2 of 5) 75911 NM_001033445 381126 Mm.312276 NM_001033445 ENSMUSG00000042680 Garem1 C86169|Fam59a|Garem|Gm944|mKIAA4238 GRB2 associated regulator of MAPK1 subtype 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-24 chr7 82273750 82274093 + 0.328191099940264 NA exon (NM_017400, exon 5 of 9) exon (NM_017400, exon 5 of 9) -61773 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-10 chr9 71419518 71419796 + 0.328191099940264 NA Intergenic B1_Mus1|SINE|Alu 65301 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding unique_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-2 chr15 79879048 79879269 + 0.328191099940264 NA Intergenic Intergenic -13250 NM_001160415 80287 Mm.284059 NM_030255 ENSMUSG00000009585 Apobec3 Apobec|Arp3|BC003314|Cem15|Gm20117|Rfv3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 protein-coding common_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-12 chr18 34519802 34520030 + 0.328191099940264 NA Intergenic Intergenic -13093 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-13 chr17 29097035 29097265 + 0.328191099940264 NA intron (NM_007669, intron 1 of 2) intron (NM_007669, intron 1 of 2) 3381 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding unique_peak1_19_15_0.049696942971674_4.02484847148584_0.328191099940264-3 chr11 61971399 61971804 + 0.328191099940264 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 14838 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-19 chr4 150808232 150808446 + 0.328191099940264 NA Intergenic Intergenic -45457 NM_001356323 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-5 chr12 17220086 17220296 + 0.328191099940264 NA Intergenic Intergenic -43303 NM_201531 382571 Mm.40173 NM_201531 ENSMUSG00000051726 Kcnf1 Gm1182|Kv5.1 potassium voltage-gated channel, subfamily F, member 1 protein-coding common_peak1_20_15_0.119589675592624_4.05979483779631_0.328191099940264-17 chr3 98059003 98059400 + 0.328191099940264 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 45663 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_19_15_0.049696942971674_4.02484847148584_0.328191099940264-28 chr8 95150093 95150384 + 0.328191099940264 NA Intergenic Intergenic -7698 NM_001145831 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_74_66_-0.122954726078009_6.00461182741877_0.328177820381507-3 chr5 107986513 107987460 + 0.328177820381507 NA promoter-TSS (NM_026062) promoter-TSS (NM_026062) 91 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak2_74_66_-0.122954726078009_6.00461182741877_0.328177820381507-4 chr8 111716210 111717305 + 0.328177820381507 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 15379 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_74_66_-0.122954726078009_6.00461182741877_0.328177820381507 chr3 41377348 41378742 + 0.328177820381507 NA Intergenic Intergenic 115154 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_74_66_-0.122954726078009_6.00461182741877_0.328177820381507 chr14 8080372 8081165 + 0.328177820381507 NA intron (NM_025938, intron 1 of 5) intron (NM_025938, intron 1 of 5) 455 NM_025938 67053 Mm.210048 NM_025938 ENSMUSG00000023156 Rpp14 2610511E03Rik|AA682089 ribonuclease P 14 subunit protein-coding common_peak1_74_66_-0.122954726078009_6.00461182741877_0.328177820381507-2 chr7 112680243 112681231 + 0.328177820381507 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 1417 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak1_75_66_-0.10398071548587_6.01409883271484_0.328177820381507 chr1 86703565 86704439 + 0.328177820381507 NA intron (NM_001172157, intron 1 of 21) CpG 198 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding common_peak2_75_66_-0.10398071548587_6.01409883271484_0.328177820381507-2 chr8 64947223 64947656 + 0.328177820381507 NA intron (NM_001163747, intron 1 of 4) CpG 254 NM_028427 73067 Mm.294445 NM_028427 ENSMUSG00000025521 Tmem192 3110005G23Rik transmembrane protein 192 protein-coding common_peak2_74_66_-0.122954726078009_6.00461182741877_0.328177820381507-2 chr14 25472932 25474119 + 0.328177820381507 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 14340 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_75_66_-0.10398071548587_6.01409883271484_0.328177820381507 chr10 86301852 86302664 + 0.328177820381507 NA intron (NM_011595, intron 1 of 4) intron (NM_011595, intron 1 of 4) 1846 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_79_62_0.0583070603252693_6.00643345366255_0.328177820381495-4 chr9 20726707 20727827 + 0.328177820381495 NA promoter-TSS (NM_001357635) promoter-TSS (NM_001357635) -264 NM_001357635 244723 Mm.293552 NM_173777 ENSMUSG00000032172 Olfm2 A030009A06Rik olfactomedin 2 protein-coding common_peak2_80_62_0.0761025296276969_6.01533118831377_0.328177820381495 chr10 85184834 85185764 + 0.328177820381495 NA promoter-TSS (NM_007771) promoter-TSS (NM_007771) -245 NM_007771 12952 Mm.26237 NM_007771 ENSMUSG00000020038 Cry1 AU020726|AU021000|Phll1 cryptochrome 1 (photolyase-like) protein-coding common_peak1_79_62_0.0583070603252693_6.00643345366255_0.328177820381495 chr11 90638144 90639080 + 0.328177820381495 NA promoter-TSS (NM_011505) promoter-TSS (NM_011505) 428 NM_199008 69802 Mm.151940 NM_199008 ENSMUSG00000020544 Cox11 2010004I09Rik cytochrome c oxidase assembly protein 11 protein-coding common_peak2_79_62_0.0583070603252693_6.00643345366255_0.328177820381495 chr1 58445135 58446021 + 0.328177820381495 NA promoter-TSS (NM_027351) promoter-TSS (NM_027351) -92 NM_027351 70225 Mm.340195 NM_027351 ENSMUSG00000026035 Ppil3 2310076N22Rik|2510026K04Rik|Cyp10l peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding common_peak1_79_62_0.0583070603252693_6.00643345366255_0.328177820381495-3 chr6 134566947 134567659 + 0.328177820381495 NA promoter-TSS (NM_008514) promoter-TSS (NM_008514) -390 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak2_79_62_0.0583070603252693_6.00643345366255_0.328177820381495-2 chr12 80132154 80132779 + 0.328177820381495 NA intron (NR_033514, intron 1 of 2) CpG 378 NR_033514 69548 Mm.269712 NR_033514 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak1_79_62_0.0583070603252693_6.00643345366255_0.328177820381495-2 chr17 78402523 78403294 + 0.328177820381495 NA intron (NM_001360407, intron 3 of 9) intron (NM_001360407, intron 3 of 9) 15244 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_80_62_0.0761025296276969_6.01533118831377_0.328177820381495-2 chr16 4642804 4643807 + 0.328177820381495 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 3360 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding common_peak1_80_62_0.0761025296276969_6.01533118831377_0.328177820381495-2 chr4 128711848 128713039 + 0.328177820381495 NA intron (NM_018774, intron 7 of 14) intron (NM_018774, intron 7 of 14) -15128 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic 2 protein-coding common_peak1_80_62_0.0761025296276969_6.01533118831377_0.328177820381495 chr11 114668711 114669613 + 0.328177820381495 NA intron (NM_001048058, intron 2 of 3) PB1D9|SINE|Alu 381 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding unique_peak2_79_62_0.0583070603252693_6.00643345366255_0.328177820381495 chr19 57238683 57239488 + 0.328177820381495 NA Intergenic Intergenic -23053 NM_178688 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_179_141_0.047511068775413_7.17350265389239_0.328175364622521 chr11 48799319 48801916 + 0.328175364622521 NA intron (NM_008143, intron 1 of 7) CpG 257 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding common_peak1_119_103_-0.0840171320884506_6.65843115209687_0.328041145103237 chr3 98055982 98057048 + 0.328041145103237 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 42977 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_125_98_0.0569586985939816_6.6578359693766_0.328041145103237 chr2 154657043 154657992 + 0.328041145103237 NA intron (NM_029362, intron 1 of 4) intron (NM_029362, intron 1 of 4) 491 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding common_peak1_173_148_-0.0704748764306835_7.18393108224682_0.327988128369029 chr9 71484826 71486103 + 0.327988128369029 NA promoter-TSS (NM_001164793) promoter-TSS (NM_001164793) -506 NM_001164793 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding common_peak1_237_201_-0.0608315349877016_7.62779571525794_0.327968658466849 chr15 96697932 96699980 + 0.327968658466849 NA intron (NM_001355633, intron 1 of 14) CpG 772 NM_001355633 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_246_194_0.0432213118863665_7.62894096969279_0.327968658466849 chr19 10561054 10562722 + 0.327968658466849 NA Intergenic Intergenic -5650 NM_026798 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding common_peak1_323_255_0.0392724939811249_8.01963624699056_0.327860065040515 chr8 34814114 34816251 + 0.327860065040515 NA intron (NM_176933, intron 1 of 3) intron (NM_176933, intron 1 of 3) 7572 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-4 chr19 37955402 37956105 + 0.327809114039775 NA intron (NM_001302140, intron 22 of 53) intron (NM_001302140, intron 22 of 53) 87824 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-8 chr2 167830677 167831274 + 0.327809114039775 NA Intergenic Intergenic -101352 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-6 chr3 14610829 14611175 + 0.327809114039775 NA intron (NM_001099674, intron 1 of 3) intron (NM_001099674, intron 1 of 3) 219 NM_001347206 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-2 chr16 78376309 78376792 + 0.327809114039775 NA intron (NM_001297747, intron 1 of 4) CpG 207 NR_002700 654432 Mm.458574 NR_002700 ENSMUSG00000044645 Gm7334 EG654432 B-cell translocation gene 3 pseudogene pseudo common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-5 chr2 25196078 25196912 + 0.327809114039775 NA intron (NM_146115, intron 1 of 1) intron (NM_146115, intron 1 of 1) 318 NM_146115 227612 Mm.119747 NM_146115 ENSMUSG00000059555 Tor4a A830007P12Rik torsin family 4, member A protein-coding common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-4 chr19 16015543 16016001 + 0.327809114039775 NA Intergenic Intergenic 30697 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-4 chr6 131346500 131347035 + 0.327809114039775 NA Intergenic Intergenic -32940 NM_172891 243659 Mm.20114 NM_172891 ENSMUSG00000032899 Styk1 9130025L13|AI326477|Nok serine/threonine/tyrosine kinase 1 protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-2 chr13 52652182 52652503 + 0.327809114039775 NA Intergenic Intergenic 55460 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-6 chr9 22225685 22226031 + 0.327809114039775 NA intron (NR_028420, intron 1 of 4) CpG 146 NM_001164624 235047 Mm.290849 NM_172763 ENSMUSG00000057982 Zfp809 BB114266|C330026E23 zinc finger protein 809 protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-7 chr2 33430925 33431542 + 0.327809114039775 NA promoter-TSS (NM_001276332) promoter-TSS (NM_001276332) 91 NM_001085507 241311 Mm.296512 NM_001085507 ENSMUSG00000068966 Zbtb34 Gm349|mKIAA1993 zinc finger and BTB domain containing 34 protein-coding common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-3 chr6 113531202 113531699 + 0.327809114039775 NA promoter-TSS (NM_001347350) promoter-TSS (NM_001347350) 188 NM_175101 66087 Mm.275989 NM_175101 ENSMUSG00000030286 Emc3 0610039A15Rik|AI225901|AW260416|Pob|Tmem111 ER membrane protein complex subunit 3 protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-6 chr2 117249774 117250046 + 0.327809114039775 NA intron (NM_026620, intron 1 of 7) CpG 171 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-11 chr7 141414473 141414969 + 0.327809114039775 NA promoter-TSS (NM_172116) promoter-TSS (NM_172116) -596 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Gatd1 BC023835|D230016J19Rik|Pddc1 glutamine amidotransferase like class 1 domain containing 1 protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-4 chr17 34837190 34837777 + 0.327809114039775 NA promoter-TSS (NM_019442) promoter-TSS (NM_019442) 464 NM_001163770 112403 Mm.275309 NM_033613 ENSMUSG00000040482 Dxo Dom3z|NG6 decapping exoribonuclease protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775 chr12 81860351 81860898 + 0.327809114039775 NA intron (NM_018814, intron 1 of 35) CpG 594 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-10 chr4 63072819 63073297 + 0.327809114039775 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 81114 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-5 chr2 102946804 102947733 + 0.327809114039775 NA Intergenic Intergenic -45603 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-3 chr17 13479241 13479756 + 0.327809114039775 NA Intergenic Intergenic -41958 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-7 chr9 75441625 75442025 + 0.327809114039775 NA intron (NM_001039522, intron 1 of 11) CpG 301 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-2 chr11 116138300 116138757 + 0.327809114039775 NA exon (NM_024177, exon 2 of 9) exon (NM_024177, exon 2 of 9) 340 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-9 chr3 98418990 98419602 + 0.327809114039775 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 36815 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-5 chr7 110787078 110787366 + 0.327809114039775 NA intron (NM_009667, intron 2 of 14) intron (NM_009667, intron 2 of 14) 14618 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775 chr14 16511102 16511781 + 0.327809114039775 NA intron (NM_001289760, intron 4 of 9) intron (NM_001289760, intron 4 of 9) 64035 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775 chr10 86290509 86290974 + 0.327809114039775 NA TTS (NM_001164495) TTS (NM_001164495) -9671 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775 chr11 78178236 78178827 + 0.327809114039775 NA promoter-TSS (NR_106113) promoter-TSS (NR_106113) -127 NM_001291236 68385 Mm.390375 NM_026708 ENSMUSG00000019437 Tlcd1 - TLC domain containing 1 protein-coding common_peak1_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-7 chr9 63748027 63748546 + 0.327809114039775 NA intron (NM_016769, intron 1 of 8) MIRb|SINE|MIR 9708 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-2 chr11 116138322 116138757 + 0.327809114039775 NA exon (NM_024177, exon 2 of 9) exon (NM_024177, exon 2 of 9) 329 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-6 chr2 30717742 30718154 + 0.327809114039775 NA Intergenic Intergenic -3262 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-3 chr12 69537688 69538366 + 0.327809114039775 NA Intergenic Intergenic 45001 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak2_41_38_-0.172867522842869_5.19896845744081_0.327809114039775-7 chr7 112376234 112376545 + 0.327809114039775 NA intron (NM_027587, intron 2 of 9) intron (NM_027587, intron 2 of 9) 8081 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-5 chr2 153345778 153346136 + 0.327809114039775 NA promoter-TSS (NR_040318) promoter-TSS (NR_040318) -147 NR_040318 72326 Mm.400102 NR_040318 ENSMUSG00000073236 2500004C02Rik - RIKEN cDNA 2500004C02 gene ncRNA common_peak2_42_38_-0.139159688652817_5.21582237453584_0.327809114039775-3 chr15 81912015 81912573 + 0.327809114039775 NA exon (NM_080633, exon 14 of 18) exon (NM_080633, exon 14 of 18) 13919 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-2 chr15 90431430 90431974 + 0.327809114039769 NA Intergenic Intergenic 77992 NR_155426 102640415 Mm.394352 NR_155426 ENSMUSG00000116204 Gm36480 - predicted gene, 36480 ncRNA unique_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769 chr10 59799507 59799998 + 0.327809114039769 NA intron (NM_001359267, intron 8 of 11) intron (NM_001359267, intron 8 of 11) -79839 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-6 chr7 63939255 63939814 + 0.327809114039769 NA promoter-TSS (NM_021366) promoter-TSS (NM_021366) -619 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-8 chr8 34224298 34224814 + 0.327809114039769 NA Intergenic Intergenic -57844 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-4 chr2 181187277 181187929 + 0.327809114039769 NA 5' UTR (NM_001356428, exon 2 of 4) 5' UTR (NM_001356428, exon 2 of 4) 356 NM_001356427 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-9 chr7 133637003 133637442 + 0.327809114039769 NA promoter-TSS (NM_178115) promoter-TSS (NM_178115) -453 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-6 chr5 64112913 64113296 + 0.327809114039769 NA intron (NM_025700, intron 12 of 13) intron (NM_025700, intron 12 of 13) 20165 NM_001356964 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-4 chr2 164456793 164457275 + 0.327809114039769 NA Intergenic Intergenic -3937 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-3 chr12 102291713 102292286 + 0.327809114039769 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 8358 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769 chr1 43147781 43148462 + 0.327809114039769 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 15840 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-8 chr6 97210907 97211223 + 0.327809114039769 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 273 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-7 chr8 3620433 3621100 + 0.327809114039769 NA promoter-TSS (NM_001195244) promoter-TSS (NM_001195244) 530 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-5 chr3 142765284 142765655 + 0.327809114039769 NA intron (NM_145546, intron 1 of 6) CpG 222 NM_145546 229906 Mm.271756 NM_145546 ENSMUSG00000028271 Gtf2b - general transcription factor IIB protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769 chr10 93305507 93306052 + 0.327809114039769 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 5380 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-2 chr12 54738612 54738995 + 0.327809114039769 NA Intergenic Intergenic -42909 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-3 chr19 55744727 55745121 + 0.327809114039769 NA intron (NR_138565, intron 3 of 15) intron (NR_138565, intron 3 of 15) 3114 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-5 chr3 34020645 34021116 + 0.327809114039769 NA intron (NM_001113189, intron 1 of 16) intron (NM_001113189, intron 1 of 16) 801 NM_001113189 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak1_45_35_0.0729283003539427_5.20638915161928_0.327809114039769-7 chr5 149376360 149376749 + 0.327809114039769 NA Intergenic Intergenic -35195 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_120_104_-0.0859347566897979_6.67127813932122_0.327774971300549-2 chr11 94403824 94405314 + 0.327774971300549 NA Intergenic Intergenic -11593 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak2_120_104_-0.0859347566897979_6.67127813932122_0.327774971300549 chr11 62550184 62551020 + 0.327774971300549 NA promoter-TSS (NR_002875) promoter-TSS (NR_002875) -569 NM_011664 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak2_76_67_-0.10662838907915_6.03414864671076_0.327760028623774-2 chr3 98056546 98057115 + 0.327760028623774 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 43292 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_81_63_0.070959567600438_6.03547978380022_0.327760028623774 chr17 65950592 65951141 + 0.327760028623774 NA intron (NM_023053, intron 1 of 4) CpG 321 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak2_76_67_-0.10662838907915_6.03414864671076_0.327760028623774 chr11 52396314 52396991 + 0.327760028623774 NA intron (NM_153117, intron 1 of 2) CpG 224 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak2_81_63_0.070959567600438_6.03547978380022_0.327760028623774 chr3 9524781 9525823 + 0.327760028623774 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 84783 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding common_peak1_314_264_-0.0509313115963366_8.02438289365239_0.327756864307441 chr8 70699014 70700679 + 0.327756864307441 NA exon (NM_010592, exon 1 of 1) exon (NM_010592, exon 1 of 1) 2107 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak2_314_264_-0.0509313115963366_8.02438289365239_0.327756864307441 chr8 70699061 70700670 + 0.327756864307441 NA exon (NM_010592, exon 1 of 1) exon (NM_010592, exon 1 of 1) 2126 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak2_240_203_-0.0571013158632052_7.64387468403989_0.327698568831449 chr11 106787274 106789571 + 0.327698568831449 NA promoter-TSS (NM_177088) promoter-TSS (NM_177088) 72 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding common_peak2_250_197_0.0442078194415858_7.6514605298004_0.327565544944421 chr7 73616470 73618393 + 0.327565544944421 NA Intergenic Intergenic -59036 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_127_100_0.0506636227462689_6.68354329412493_0.327513992693979-2 chr19 14596884 14597993 + 0.327513992693979 NA promoter-TSS (NM_001302951) promoter-TSS (NM_001302951) -225 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_128_100_0.0618116701118483_6.68911731780772_0.327513992693979-2 chr3 122046117 122047294 + 0.327513992693979 NA intron (NM_007378, intron 1 of 49) intron (NM_007378, intron 1 of 49) 2245 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_128_100_0.0618116701118483_6.68911731780772_0.327513992693979 chr11 120580633 120582157 + 0.327513992693979 NA intron (NM_133796, intron 1 of 5) CpG 225 NM_133796 192662 Mm.30016 NM_133796 ENSMUSG00000025132 Arhgdia 5330430M07Rik|Gdi-1|Rho-GDI|RhoDGI|RhoGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding common_peak1_127_100_0.0506636227462689_6.68354329412493_0.327513992693979 chr15 39942910 39944371 + 0.327513992693979 NA exon (NM_172814, exon 1 of 7) exon (NM_172814, exon 1 of 7) 354 NM_001347036 239393 Mm.39874 NM_172814 ENSMUSG00000022305 Lrp12 AI848829|C820005L12Rik|LRP-12 low density lipoprotein-related protein 12 protein-coding common_peak1_251_198_0.0426357185566975_7.657942479822_0.327433841594206 chr15 38931370 38932964 + 0.327433841594206 NA Intergenic Intergenic -1742 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_242_205_-0.0593374514013938_7.65683180148252_0.327433841594206 chr1 84837973 84840485 + 0.327433841594206 NA promoter-TSS (NM_025386) promoter-TSS (NM_025386) 75 NM_133975 14897 Mm.209265 NM_133975 ENSMUSG00000026219 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|TRIP-12 thyroid hormone receptor interactor 12 protein-coding common_peak2_77_68_-0.109205659668845_6.05392162694375_0.327354903130192-2 chr17 29660705 29661530 + 0.327354903130192 NA intron (NM_028791, intron 1 of 23) intron (NM_028791, intron 1 of 23) 522 NM_028791 74157 Mm.390979 NM_028791 ENSMUSG00000024019 Cmtr1 1300018I05Rik|AI451264|Ftsjd2|MTr1 cap methyltransferase 1 protein-coding common_peak2_82_64_0.0659558078624638_6.05534571695969_0.327354903130192 chr9 114688777 114689360 + 0.327354903130192 NA intron (NM_146229, intron 1 of 12) CpG 237 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding common_peak2_77_68_-0.109205659668845_6.05392162694375_0.327354903130192-3 chr2 57116543 57117533 + 0.327354903130192 NA intron (NM_001139509, intron 1 of 7) intron (NM_001139509, intron 1 of 7) -2000 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_77_68_-0.109205659668845_6.05392162694375_0.327354903130192 chr16 23424095 23425537 + 0.327354903130192 NA Intergenic Intergenic -4317 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_82_64_0.0659558078624638_6.05534571695969_0.327354903130192 chr19 59861529 59862508 + 0.327354903130192 NA Intergenic Intergenic 81346 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_77_68_-0.109205659668845_6.05392162694375_0.327354903130192 chr8 36744248 36745353 + 0.327354903130192 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -11746 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_178_152_-0.0681102703561445_7.22333270751458_0.32726432093949 chr15 10661398 10662759 + 0.32726432093949 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 51462 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_185_146_0.0445578173706274_7.22195125352168_0.32726432093949 chr19 55253196 55254209 + 0.32726432093949 NA 5' UTR (NM_027976, exon 1 of 22) 5' UTR (NM_027976, exon 1 of 22) 333 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak1_186_146_0.052238891306108_7.22579179048942_0.32726432093949 chr1 86064404 86066104 + 0.32726432093949 NA intron (NM_027357, intron 1 of 24) intron (NM_027357, intron 1 of 24) 635 NM_027357 70247 Mm.280013 NM_027357 ENSMUSG00000026229 Psmd1 2410026J11Rik|P112|S1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein-coding common_peak1_122_106_-0.0896718165732535_6.69663107811452_0.327258058638642 chr12 84847003 84848650 + 0.327258058638642 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -27976 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA common_peak2_245_207_-0.0556995278864436_7.67258995419787_0.327174318618081 chr8 11380746 11382502 + 0.327174318618081 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -68798 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-4 chr12 31264479 31265037 + 0.327094617740873 NA promoter-TSS (NM_008482) promoter-TSS (NM_008482) -536 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-4 chr18 35021725 35022405 + 0.327094617740873 NA Intergenic Intergenic -67714 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-11 chr9 50768253 50768666 + 0.327094617740873 NA promoter-TSS (NM_001361107) promoter-TSS (NM_001361107) 221 NM_198675 382137 Mm.390169 NM_198675 ENSMUSG00000037845 Fdxacb1 D630004A14Rik ferredoxin-fold anticodon binding domain containing 1 protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-8 chr19 46215785 46216490 + 0.327094617740873 NA intron (NM_178930, intron 3 of 39) intron (NM_178930, intron 3 of 39) 63579 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-5 chr2 179976919 179977215 + 0.327094617740873 NA promoter-TSS (NM_001081092) promoter-TSS (NM_001081092) 214 NR_033782 66730 Mm.31773 NR_033782 ENSMUSG00000085704 4921531C22Rik - RIKEN cDNA 4921531C22 gene ncRNA common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-5 chr15 66969097 66969602 + 0.327094617740873 NA intron (NM_008681, intron 1 of 15) CpG 292 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-3 chr11 98412551 98413204 + 0.327094617740873 NA intron (NM_001003817, intron 1 of 26) CpG 393 NM_001003817 13866 Mm.290822 NM_001003817 ENSMUSG00000062312 Erbb2 Erbb-2|HER-2|HER2|Neu|c-erbB2|c-neu|l11Jus8|mKIAA3023 erb-b2 receptor tyrosine kinase 2 protein-coding common_peak2_43_39_-0.142752692290302_5.25055174874221_0.327094617740873 chr17 66364958 66365585 + 0.327094617740873 NA intron (NM_172963, intron 8 of 13) intron (NM_172963, intron 8 of 13) 84479 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-2 chr1 132287383 132288035 + 0.327094617740873 NA Intergenic MIRc|SINE|MIR -10917 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-10 chr2 128966739 128967132 + 0.327094617740873 NA promoter-TSS (NM_178404) promoter-TSS (NM_178404) -467 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-6 chr6 87183461 87183899 + 0.327094617740873 NA intron (NM_054041, intron 16 of 17) intron (NM_054041, intron 16 of 17) 78934 NM_001167937 52372 Mm.282851 NM_001167937 ENSMUSG00000090891 D6Ertd527e AU043841 DNA segment, Chr 6, ERATO Doi 527, expressed protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-2 chr13 85289602 85290109 + 0.327094617740873 NA promoter-TSS (NM_145452) promoter-TSS (NM_145452) -369 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-7 chr17 23563610 23564057 + 0.327094617740873 NA non-coding (NR_126484, exon 2 of 2) non-coding (NR_126484, exon 2 of 2) 393 NM_001033496 449521 Mm.268582 NM_001033496 ENSMUSG00000071256 Zfp213 BC038178|D17Ertd197e zinc finger protein 213 protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-2 chr11 100289675 100290261 + 0.327094617740873 NA Intergenic Intergenic -20097 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873 chr10 81268259 81268967 + 0.327094617740873 NA intron (NM_018758, intron 1 of 10) intron (NM_018758, intron 1 of 10) 441 NM_018758 57267 Mm.293931 NM_018758 ENSMUSG00000004931 Apba3 AW208791|Mint-3|X11gamma|lin-10|mint3 amyloid beta (A4) precursor protein-binding, family A, member 3 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-10 chr6 58640219 58640980 + 0.327094617740873 NA intron (NM_011920, intron 1 of 15) CpG 43927 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding common_peak2_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-2 chr8 13889827 13890290 + 0.327094617740873 NA intron (NM_001359059, intron 1 of 2) CpG 213 NM_001359059 66423 Mm.29063 NM_025556 ENSMUSG00000031458 Coprs 1700029I03Rik|2410022L05Rik|AA409325|AI256813|C85432|Copr5 coordinator of PRMT5, differentiation stimulator protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873 chr11 88180934 88181270 + 0.327094617740873 NA intron (NM_001172099, intron 2 of 9) intron (NM_001172099, intron 2 of 9) 11537 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-7 chr6 125161674 125162494 + 0.327094617740873 NA TTS (NM_001302779) TTS (NM_001302779) 3689 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-4 chr14 18331134 18331737 + 0.327094617740873 NA intron (NM_009455, intron 1 of 5) CpG 409 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-3 chr13 23543894 23544625 + 0.327094617740873 NA promoter-TSS (NM_178197) promoter-TSS (NM_178197) 207 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-8 chr4 88776106 88776653 + 0.327094617740873 NA promoter-TSS (NM_001243155).2 promoter-TSS (NM_001243155).2 -383 NM_001243165 545647 Mm.380019 NM_001243165 ENSMUSG00000096582 Gm13289 - predicted gene 13289 protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-9 chr2 32679602 32680096 + 0.327094617740873 NA intron (NM_001146348, intron 12 of 14) L1Md_T|LINE|L1 7917 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-6 chr15 80159616 80160016 + 0.327094617740873 NA intron (NM_025609, intron 10 of 10) intron (NM_025609, intron 10 of 10) -13905 NM_010795 17309 Mm.299693 NM_010795 ENSMUSG00000042428 Mgat3 1110038J12Rik|AI848272|GnT-III mannoside acetylglucosaminyltransferase 3 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-7 chr4 58150131 58150861 + 0.327094617740873 NA intron (NM_022814, intron 3 of 47) intron (NM_022814, intron 3 of 47) 56100 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-9 chr5 137105647 137106247 + 0.327094617740873 NA Intergenic Intergenic 10260 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-5 chr15 102045981 102046621 + 0.327094617740873 NA Intergenic B1F2|SINE|Alu 18085 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak1_43_39_-0.142752692290302_5.25055174874221_0.327094617740873-11 chr2 168458126 168458566 + 0.327094617740873 NA Intergenic Intergenic 132019 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873 chr1 44119138 44119744 + 0.327094617740873 NA promoter-TSS (NM_023645) promoter-TSS (NM_023645) -87 NM_001357048 246229 Mm.386883 NM_144558 ENSMUSG00000041684 Bivm AI854267 basic, immunoglobulin-like variable motif containing protein-coding common_peak1_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-6 chr19 37965772 37966295 + 0.327094617740873 NA intron (NM_001302140, intron 19 of 53) intron (NM_001302140, intron 19 of 53) 77544 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_46_36_0.0642079376731042_5.2415573344655_0.327094617740873-3 chr15 102045997 102046602 + 0.327094617740873 NA Intergenic B1F2|SINE|Alu 18083 NM_010664 16668 Mm.22479 NM_010664 ENSMUSG00000023043 Krt18 CK18|K18|Krt1-18 keratin 18 protein-coding common_peak2_130_102_0.055561781259172_6.7142814178128_0.327007024258744-2 chr10 116995164 116996338 + 0.327007024258744 NA intron (NM_001007583, intron 4 of 9) intron (NM_001007583, intron 4 of 9) 9437 NM_001007583 382427 Mm.339322 NM_001007583 ENSMUSG00000020169 Best3 Vmd2l3|mBest4 bestrophin 3 protein-coding common_peak1_130_102_0.055561781259172_6.7142814178128_0.327007024258744-2 chr8 11496943 11498003 + 0.327007024258744 NA promoter-TSS (NM_026995) promoter-TSS (NM_026995) -33 NM_001190357 69225 Mm.64911 NM_026995 ENSMUSG00000031505 Naxd 0710008K08Rik|2810407E01Rik|Carkd NAD(P)HX dehydratase protein-coding common_peak2_130_102_0.055561781259172_6.7142814178128_0.327007024258744 chr1 90998265 90999633 + 0.327007024258744 NA intron (NM_001111312, intron 1 of 12) CpG 222 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_130_102_0.055561781259172_6.7142814178128_0.327007024258744 chr2 120127172 120128569 + 0.327007024258744 NA intron (NM_133838, intron 2 of 5) intron (NM_133838, intron 2 of 5) 26705 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak2_124_107_-0.0799867208305249_6.71489414174821_0.32700702425872 chr17 80060951 80062228 + 0.32700702425872 NA intron (NR_152119, intron 1 of 13) CpG 679 NR_152119 72692 Mm.64579 NM_144802 ENSMUSG00000024095 Hnrnpll 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll heterogeneous nuclear ribonucleoprotein L-like protein-coding common_peak2_78_69_-0.11171535066969_6.07342534161012_0.326961876409496-3 chr4 139597348 139598467 + 0.326961876409496 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 23187 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_78_69_-0.11171535066969_6.07342534161012_0.326961876409496-2 chr14 76518915 76520091 + 0.326961876409496 NA intron (NR_045660, intron 2 of 3) intron (NR_045660, intron 2 of 3) 1352 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_83_65_0.0610855970876827_6.07493691790229_0.326961876409496 chr4 130107666 130108372 + 0.326961876409496 NA intron (NM_026441, intron 1 of 4) CpG 463 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_78_69_-0.11171535066969_6.07342534161012_0.326961876409496-4 chr7 38018820 38019543 + 0.326961876409496 NA exon (NM_011274, exon 1 of 11) exon (NM_011274, exon 1 of 11) 371 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak1_78_69_-0.11171535066969_6.07342534161012_0.326961876409496 chr11 64079062 64080236 + 0.326961876409496 NA promoter-TSS (NM_178379) promoter-TSS (NM_178379) 165 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak2_83_65_0.0610855970876827_6.07493691790229_0.326961876409496 chr8 105552405 105553082 + 0.326961876409496 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 13321 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_78_69_-0.11171535066969_6.07342534161012_0.326961876409496 chr14 20804947 20805777 + 0.326961876409496 NA Intergenic Intergenic 11123 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA common_peak2_524_415_0.0302438366663118_8.71556163647425_0.32688146832832 chr19 38025555 38028852 + 0.32688146832832 NA intron (NM_001302140, intron 1 of 53) intron (NM_001302140, intron 1 of 53) 16374 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_131_103_0.052516307110178_6.72669787169618_0.326760750174189 chr6 50454401 50456053 + 0.326760750174189 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 943 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_125_108_-0.0818690061033349_6.72724982172526_0.326760750174164 chr7 126976111 126976944 + 0.326760750174164 NA promoter-TSS (NM_001362232) promoter-TSS (NM_001362232) 613 NM_001347656 52858 Mm.28219 NM_026638 ENSMUSG00000030682 Cdipt 9530042F15Rik|D7Bwg0575e|Pis|Pis1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) protein-coding common_peak2_182_155_-0.0644655269051624_7.25316945540967_0.326746470277089 chr10 128921698 128922990 + 0.326746470277089 NA intron (NM_015740, intron 2 of 3) intron (NM_015740, intron 2 of 3) 1180 NM_015740 14533 Mm.30118 NM_015740 ENSMUSG00000090247 Bloc1s1 AI839753|BLOS1|Gcn5l1 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-5 chr13 3893139 3893475 + 0.326591483156968 NA exon (NM_001047159, exon 1 of 10) exon (NM_001047159, exon 1 of 10) 274 NM_001047159 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968 chr11 69902464 69902788 + 0.326591483156968 NA intron (NM_001013414, intron 1 of 28) intron (NM_001013414, intron 1 of 28) 810 NM_001013414 216860 Mm.268347 NM_001013414 ENSMUSG00000047284 Neurl4 - neuralized E3 ubiquitin protein ligase 4 protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-3 chr19 17837337 17837651 + 0.326591483156968 NA 5' UTR (NM_001190483, exon 1 of 38) 5' UTR (NM_001190483, exon 1 of 38) 138 NM_001163144 18552 Mm.3401 NM_001163144 ENSMUSG00000024713 Pcsk5 PC5|PC6|SPC6|b2b1549Clo|b2b585Clo proprotein convertase subtilisin/kexin type 5 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-2 chr11 23008514 23008775 + 0.326591483156968 NA Intergenic CpG -4743 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-10 chr16 38119774 38120190 + 0.326591483156968 NA intron (NM_001347232, intron 1 of 11) intron (NM_001347232, intron 1 of 11) -30722 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-12 chr4 95557836 95558207 + 0.326591483156968 NA intron (NM_001113412, intron 1 of 15) intron (NM_001113412, intron 1 of 15) 514 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-19 chr7 12978392 12978737 + 0.326591483156968 NA intron (NM_001168562, intron 1 of 4) intron (NM_001168562, intron 1 of 4) 716 NM_001168561 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-25 chr8 68102781 68103014 + 0.326591483156968 NA Intergenic Intergenic -128323 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-10 chr6 108662864 108663173 + 0.326591483156968 NA intron (NM_011498, intron 4 of 4) intron (NM_011498, intron 4 of 4) -2084 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-9 chr2 165287560 165287796 + 0.326591483156968 NA TTS (NM_207706) TTS (NM_207706) 109 NM_001252574 228875 Mm.21184 NM_144893 ENSMUSG00000017664 Slc35c2 C85957|CGI-15|D2Wsu58e|Ovcov1 solute carrier family 35, member C2 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-3 chr11 49091510 49091944 + 0.326591483156968 NA intron (NM_008330, intron 1 of 1) B3|SINE|B2 4710 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-7 chr4 130111543 130111827 + 0.326591483156968 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 4129 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding unique_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-2 chr13 98008177 98008622 + 0.326591483156968 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 197766 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-3 chr10 77136418 77136850 + 0.326591483156968 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) -22929 NM_001109991 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding unique_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-4 chr3 95674540 95674753 + 0.326591483156968 NA Intergenic Intergenic 13271 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-8 chr13 110909697 110909926 + 0.326591483156968 NA Intergenic Intergenic -5965 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-6 chr12 104916652 104917217 + 0.326591483156968 NA Intergenic Intergenic -51858 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-5 chr12 76507952 76508221 + 0.326591483156968 NA Intergenic Intergenic 25126 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-12 chr7 64251543 64251919 + 0.326591483156968 NA intron (NM_001039104, intron 26 of 26) G-rich|Low_complexity|Low_complexity -1632 NR_105844 102465226 NR_105844 ENSMUSG00000098910 Mir6416 Gm27746|mmu-mir-6416 microRNA 6416 ncRNA unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-5 chr5 124629176 124629373 + 0.326591483156968 NA exon (NM_011596, exon 1 of 20) exon (NM_011596, exon 1 of 20) 222 NM_011596 21871 Mm.1158 NM_011596 ENSMUSG00000038023 Atp6v0a2 8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2 ATPase, H+ transporting, lysosomal V0 subunit A2 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-2 chr10 24596262 24596639 + 0.326591483156968 NA exon (NM_010217, exon 3 of 5) exon (NM_010217, exon 3 of 5) 1008 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-3 chr19 16272511 16272890 + 0.326591483156968 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 42304 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-15 chr3 35754177 35754518 + 0.326591483156968 NA non-coding (NR_151626, exon 1 of 31) non-coding (NR_151626, exon 1 of 31) 284 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-3 chr11 97416653 97417070 + 0.326591483156968 NA Intergenic Intergenic -33299 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968 chr2 152809567 152810026 + 0.326591483156968 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 18693 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-4 chr11 103260098 103260546 + 0.326591483156968 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 7079 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-12 chr18 64939889 64940099 + 0.326591483156968 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) 52238 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-6 chr6 145968552 145968987 + 0.326591483156968 NA Intergenic Intergenic 34647 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-6 chr15 3435447 3435662 + 0.326591483156968 NA intron (NM_001048178, intron 2 of 8) intron (NM_001048178, intron 2 of 8) -132028 NM_001357801 100039139 Mm.455610 NM_001166063 ENSMUSG00000091119 Ccdc152 - coiled-coil domain containing 152 protein-coding unique_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-2 chr7 45413451 45413782 + 0.326591483156968 NA promoter-TSS (NM_198190) promoter-TSS (NM_198190) -79 NM_198190 78405 Mm.20344 NM_198190 ENSMUSG00000074121 Ntf5 2900040K06Rik|AI462899|NT-4|NT-5|NT4|NT4/5|Ntf-5|Ntf4 neurotrophin 5 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968 chr11 12429738 12430242 + 0.326591483156968 NA intron (NM_001282993, intron 1 of 13) intron (NM_001282993, intron 1 of 13) -17850 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-7 chr19 4476339 4476599 + 0.326591483156968 NA intron (NM_134164, intron 1 of 7) intron (NM_134164, intron 1 of 7) 674 NM_134164 171180 Mm.262270 NM_134164 ENSMUSG00000049303 Syt12 - synaptotagmin XII protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-17 chr5 120566936 120567228 + 0.326591483156968 NA intron (NM_145853, intron 2 of 27) intron (NM_145853, intron 2 of 27) 21531 NM_145853 252972 Mm.114054 NM_145853 ENSMUSG00000032741 Tpcn1 5730403B01Rik|Tpc1|mKIAA1169 two pore channel 1 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-10 chr2 30364406 30364744 + 0.326591483156968 NA 5' UTR (NM_175392, exon 1 of 16) 5' UTR (NM_175392, exon 1 of 16) 240 NM_175392 108958 Mm.254974 NM_175392 ENSMUSG00000026858 Miga2 5730472N09Rik|AA408683|AI790341|C9orf54|Fam73b|R74766 mitoguardin 2 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-5 chr11 96297270 96297534 + 0.326591483156968 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -1672 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-9 chr8 92834656 92835080 + 0.326591483156968 NA intron (NM_008610, intron 5 of 12) intron (NM_008610, intron 5 of 12) 7571 NM_008610 17390 Mm.29564 NM_008610 ENSMUSG00000031740 Mmp2 Clg4a|GelA|MMP-2 matrix metallopeptidase 2 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-9 chr5 65764057 65764301 + 0.326591483156968 NA intron (NM_001024917, intron 1 of 19) CpG 658 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-9 chr7 82463126 82463403 + 0.326591483156968 NA intron (NM_001190374, intron 6 of 29) intron (NM_001190374, intron 6 of 29) 127570 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-9 chr17 35557199 35557425 + 0.326591483156968 NA TTS (NM_001355275) TTS (NM_001355275) 5184 NM_001008424 386463 Mm.426664 NM_001008424 ENSMUSG00000039518 Cdsn AI747712 corneodesmosin protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-5 chr18 68192386 68192729 + 0.326591483156968 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -35389 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-14 chr8 36637922 36638320 + 0.326591483156968 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -24178 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-2 chr11 44945842 44946228 + 0.326591483156968 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 170893 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968 chr10 10555703 10555930 + 0.326591483156968 NA intron (NM_026405, intron 1 of 2) intron (NM_026405, intron 1 of 2) 2391 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-6 chr15 66849995 66850406 + 0.326591483156968 NA intron (NM_009375, intron 47 of 47) intron (NM_009375, intron 47 of 47) -18371 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-2 chr15 64798416 64798805 + 0.326591483156968 NA intron (NM_009623, intron 5 of 17) intron (NM_009623, intron 5 of 17) 123686 NM_001331075 11514 Mm.1425 NM_009623 ENSMUSG00000022376 Adcy8 AC8|AW060868 adenylate cyclase 8 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-6 chr12 76551009 76551482 + 0.326591483156968 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) -3320 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-3 chr11 49093707 49094032 + 0.326591483156968 NA intron (NM_001271676, intron 2 of 2) intron (NM_001271676, intron 2 of 2) 6852 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding unique_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-6 chr7 141047522 141047767 + 0.326591483156968 NA Intergenic Intergenic -13630 NM_177897 330671 Mm.133741 NM_177897 ENSMUSG00000055629 B4galnt4 BC038881|Gm1095|beta4GalNAcT4 beta-1,4-N-acetyl-galactosaminyl transferase 4 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-14 chr7 125444134 125444491 + 0.326591483156968 NA promoter-TSS (NM_029842) promoter-TSS (NM_029842) -308 NM_029842 77035 Mm.307239 NM_029842 ENSMUSG00000030752 Kdm8 3110005O21Rik|Jmjd5 lysine (K)-specific demethylase 8 protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-7 chr7 144613385 144613670 + 0.326591483156968 NA intron (NM_001242349, intron 15 of 24) intron (NM_001242349, intron 15 of 24) -31091 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-8 chr2 37423229 37423472 + 0.326591483156968 NA promoter-TSS (NM_001290642) promoter-TSS (NM_001290642) -447 NM_001290642 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-15 chr9 14234073 14234385 + 0.326591483156968 NA Intergenic Intergenic -42072 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-8 chr15 102990546 102990775 + 0.326591483156968 NA 5' UTR (NM_010466, exon 1 of 2) 5' UTR (NM_010466, exon 1 of 2) 121 NM_010466 15426 Mm.6167 NM_010466 ENSMUSG00000001657 Hoxc8 D130011F21Rik|Hox-3.1 homeobox C8 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-15 chr8 90796850 90797078 + 0.326591483156968 NA Intergenic Intergenic -31871 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968 chr10 67717815 67718062 + 0.326591483156968 NA Intergenic Intergenic -145979 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-7 chr13 59646675 59646935 + 0.326591483156968 NA intron (NM_001035122, intron 5 of 9) intron (NM_001035122, intron 5 of 9) 28979 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968 chr1 106715229 106715683 + 0.326591483156968 NA Intergenic Intergenic -1166 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-7 chr14 76881125 76881393 + 0.326591483156968 NA Intergenic Intergenic 121128 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-11 chr8 71485695 71485963 + 0.326591483156968 NA exon (NM_001164679, exon 1 of 17) exon (NM_001164679, exon 1 of 17) 238 NM_001164679 382014 Mm.260360 NM_001164679 ENSMUSG00000034863 Ano8 BC053460|Tmem16h anoctamin 8 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-13 chr7 116245846 116246168 + 0.326591483156968 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -8231 NM_001305186 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-4 chr10 71347914 71348135 + 0.326591483156968 NA exon (NM_001347191, exon 1 of 6) exon (NM_001347191, exon 1 of 6) 261 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-8 chr8 47929253 47929809 + 0.326591483156968 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 61020 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-20 chr7 19002691 19002895 + 0.326591483156968 NA Intergenic Intergenic -1272 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-8 chr7 66363500 66363892 + 0.326591483156968 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 18028 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-18 chr5 137510635 137510962 + 0.326591483156968 NA Intergenic CpG -8082 NM_031408 57330 Mm.268344 NM_031408 ENSMUSG00000029714 Gigyf1 Perq1|mKIAA4110 GRB10 interacting GYF protein 1 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-14 chr2 167062279 167062642 + 0.326591483156968 NA promoter-TSS (NR_138563) promoter-TSS (NR_138563) -474 NR_138563 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-21 chr7 38230659 38230924 + 0.326591483156968 NA Intergenic Intergenic -2797 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-16 chr9 72712702 72712954 + 0.326591483156968 NA intron (NM_010890, intron 9 of 28) intron (NM_010890, intron 9 of 28) 19530 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-11 chr17 71474387 71474710 + 0.326591483156968 NA intron (NM_028887, intron 1 of 47) intron (NM_028887, intron 1 of 47) 795 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-17 chr9 121720095 121720526 + 0.326591483156968 NA intron (NM_010918, intron 2 of 16) L2a|LINE|L2 1129 NM_010918 18087 Mm.32842 NM_010918 ENSMUSG00000032525 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-12 chr9 102733695 102734012 + 0.326591483156968 NA TTS (NM_019764) TTS (NM_019764) -5795 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-4 chr2 168065955 168066370 + 0.326591483156968 NA Intergenic Intergenic -14842 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-24 chr7 141391671 141391917 + 0.326591483156968 NA promoter-TSS (NM_011528) promoter-TSS (NM_011528) -366 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-4 chr11 51855835 51856097 + 0.326591483156968 NA intron (NM_001357588, intron 1 of 12) intron (NM_001357588, intron 1 of 12) 1515 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-6 chr2 39007714 39007914 + 0.326591483156968 NA promoter-TSS (NM_028809) promoter-TSS (NM_028809) -325 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding unique_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-5 chr5 110659072 110659339 + 0.326591483156968 NA 3' UTR (NM_027156, exon 15 of 15) 3' UTR (NM_027156, exon 15 of 15) 5754 NM_027156 69663 Mm.5267 NM_027156 ENSMUSG00000029504 Ddx51 2310061O04Rik|AA537002|C81583|R75505 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-10 chr5 92961308 92961696 + 0.326591483156968 NA intron (NM_001077596, intron 8 of 9) intron (NM_001077596, intron 8 of 9) 63509 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-22 chr7 110108907 110109157 + 0.326591483156968 NA Intergenic Intergenic -13027 NM_001355058 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-5 chr12 69242136 69242517 + 0.326591483156968 NA intron (NM_178253, intron 1 of 12) intron (NM_178253, intron 1 of 12) 494 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-11 chr6 33870725 33871048 + 0.326591483156968 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -158562 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-16 chr4 109118177 109118621 + 0.326591483156968 NA promoter-TSS (NM_001134791) promoter-TSS (NM_001134791) -363 NM_001134791 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-2 chr10 119876391 119876662 + 0.326591483156968 NA intron (NM_001358811, intron 1 of 23) intron (NM_001358811, intron 1 of 23) -24136 NR_131760 78105 Mm.399086 NR_131760 ENSMUSG00000085418 Grip1os1 4930404E01Rik|4930483C13Rik glutamate receptor interacting protein 1, opposite strand 1 ncRNA common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-2 chr1 186604433 186604707 + 0.326591483156968 NA Intergenic Intergenic -45889 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-23 chr7 112290480 112290738 + 0.326591483156968 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 64773 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-13 chr5 135064380 135064609 + 0.326591483156968 NA exon (NM_025362, exon 1 of 1) exon (NM_025362, exon 1 of 1) 172 NM_025375 66138 Mm.439878 NM_025375 ENSMUSG00000005378 Bud23 1110003N24Rik|Wbscr22 BUD23, rRNA methyltransferase and ribosome maturation factor protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-16 chr9 71288672 71288880 + 0.326591483156968 NA intron (NM_009022, intron 12 of 13) intron (NM_009022, intron 12 of 13) 72987 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-7 chr19 8977235 8977650 + 0.326591483156968 NA exon (NM_026007, exon 8 of 10) exon (NM_026007, exon 8 of 10) 10401 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-9 chr15 76879354 76879586 + 0.326591483156968 NA 5' UTR (NM_001358816, exon 1 of 5) 5' UTR (NM_001358816, exon 1 of 5) 217 NM_001358817 223669 Mm.38948 NM_145916 ENSMUSG00000033669 Zfp7 KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2 zinc finger protein 7 protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-3 chr10 43901436 43901676 + 0.326591483156968 NA promoter-TSS (NM_130892) promoter-TSS (NM_130892) 180 NM_001081054 76563 Mm.5904 NM_001081054 ENSMUSG00000019863 Qrsl1 2700038P16Rik|C80053|GatA glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 protein-coding unique_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-10 chr8 22505886 22506188 + 0.326591483156968 NA intron (NM_011394, intron 1 of 10) intron (NM_011394, intron 1 of 10) -29158 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-11 chr2 131932338 131932766 + 0.326591483156968 NA intron (NM_001278256, intron 3 of 3) intron (NM_001278256, intron 3 of 3) -18309 NM_001278257 26434 Mm.180750 NM_023043 ENSMUSG00000027338 Prnd AI450264|Dpl|PrPLP|doppel prion like protein doppel protein-coding common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-26 chr9 72712776 72713066 + 0.326591483156968 NA intron (NM_010890, intron 9 of 28) intron (NM_010890, intron 9 of 28) 19623 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-4 chr11 95008591 95008885 + 0.326591483156968 NA Intergenic Intergenic -1141 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968 chr1 180363874 180364072 + 0.326591483156968 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -33424 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968 chr1 91298974 91299223 + 0.326591483156968 NA intron (NM_016717, intron 1 of 11) intron (NM_016717, intron 1 of 11) 760 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-8 chr5 53042354 53042801 + 0.326591483156968 NA Intergenic Intergenic -6776 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding common_peak2_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-4 chr10 116259201 116259608 + 0.326591483156968 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -41970 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_18_18_-0.271709079325194_4.11207297378099_0.326591483156968-11 chr8 10925351 10925610 + 0.326591483156968 NA non-coding (NR_030715, exon 3 of 3) non-coding (NR_030715, exon 3 of 3) 2977 NR_030715 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA common_peak1_21_16_0.0987675409199653_4.13684661171032_0.326591483156968-13 chr19 24998986 24999252 + 0.326591483156968 NA promoter-TSS (NM_028785) promoter-TSS (NM_028785) -410 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_80_70_-0.0963646663770685_6.10156478631615_0.326580414377147 chr12 21425498 21426672 + 0.326580414377147 NA Intergenic Intergenic -8649 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak1_80_70_-0.0963646663770685_6.10156478631615_0.326580414377147 chr11 55468238 55469210 + 0.326580414377147 NA Intergenic Intergenic -1028 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_85_66_0.0730983601784168_6.10263837054698_0.326580414377147 chr11 86608194 86609516 + 0.326580414377147 NA intron (NM_001356531, intron 8 of 11) intron (NM_001356531, intron 8 of 11) -24697 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_84_66_0.056343586059314_6.09426098348743_0.326580414377147-4 chrX 96122258 96122977 + 0.326580414377147 NA intron (NM_010833, intron 1 of 12) B1F2|SINE|Alu 26572 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_79_70_-0.114160135679496_6.09266705166493_0.326580414377147-2 chr11 83298494 83299496 + 0.326580414377147 NA promoter-TSS (NM_134025) promoter-TSS (NM_134025) -18 NM_134025 103737 Mm.102205 NM_134025 ENSMUSG00000018733 Pex12 AI451906 peroxisomal biogenesis factor 12 protein-coding common_peak1_84_66_0.056343586059314_6.09426098348743_0.326580414377147-3 chr7 101969414 101970482 + 0.326580414377147 NA 5' UTR (NM_133947, exon 1 of 25) 5' UTR (NM_133947, exon 1 of 25) 105 NM_133947 101706 Mm.27259 NM_133947 ENSMUSG00000066306 Numa1 6720401E04Rik|AA764025|AL022610|AU014979|NuMA nuclear mitotic apparatus protein 1 protein-coding common_peak2_80_70_-0.0963646663770685_6.10156478631615_0.326580414377147-2 chr9 100643630 100644706 + 0.326580414377147 NA intron (NM_009282, intron 1 of 33) CpG 720 NM_001357265 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding common_peak2_84_66_0.056343586059314_6.09426098348743_0.326580414377147 chr11 107188631 107189300 + 0.326580414377147 NA intron (NM_133702, intron 1 of 17) CpG 416 NM_133702 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak2_85_66_0.0730983601784168_6.10263837054698_0.326580414377147-2 chr5 43781252 43782030 + 0.326580414377147 NA intron (NM_178729, intron 1 of 8) CpG 508 NM_001159963 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding common_peak2_85_66_0.0730983601784168_6.10263837054698_0.326580414377147 chr3 57503799 57504820 + 0.326580414377147 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 71567 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_84_66_0.056343586059314_6.09426098348743_0.326580414377147 chr14 43246101 43246938 + 0.326580414377147 NA Intergenic Intergenic 101292 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak2_79_70_-0.114160135679496_6.09266705166493_0.326580414377147-5 chr3 28805568 28806172 + 0.326580414377147 NA intron (NR_154889, intron 1 of 3) intron (NR_154889, intron 1 of 3) 362 NM_026517 68028 Mm.21724 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding common_peak1_85_66_0.0730983601784168_6.10263837054698_0.326580414377147-2 chr11 107188560 107189229 + 0.326580414377147 NA intron (NM_133702, intron 1 of 17) intron (NM_133702, intron 1 of 17) 487 NM_133702 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak2_85_66_0.0730983601784168_6.10263837054698_0.326580414377147-3 chr6 35252679 35253221 + 0.326580414377147 NA non-coding (NR_027875, exon 1 of 3) non-coding (NR_027875, exon 1 of 3) 218 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak1_80_70_-0.0963646663770685_6.10156478631615_0.326580414377147-2 chr4 132532563 132533563 + 0.326580414377147 NA intron (NM_007512, intron 3 of 3) intron (NM_007512, intron 3 of 3) 2351 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding common_peak2_79_70_-0.114160135679496_6.09266705166493_0.326580414377147-3 chr15 51804057 51804751 + 0.326580414377147 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 61057 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_79_70_-0.114160135679496_6.09266705166493_0.326580414377147 chr1 87327026 87327879 + 0.326580414377147 NA intron (NM_146112, intron 1 of 28) CpG 454 NM_001110212 227331 Mm.23065 NM_146112 ENSMUSG00000048000 Gigyf2 2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642 GRB10 interacting GYF protein 2 protein-coding common_peak1_84_66_0.056343586059314_6.09426098348743_0.326580414377147-2 chr15 56720221 56721304 + 0.326580414377147 NA Intergenic Intergenic -26216 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak2_79_70_-0.114160135679496_6.09266705166493_0.326580414377147-4 chr19 5425145 5425706 + 0.326580414377147 NA promoter-TSS (NM_024176) promoter-TSS (NM_024176) 281 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak2_84_66_0.056343586059314_6.09426098348743_0.326580414377147-2 chr3 81032139 81033144 + 0.326580414377147 NA Intergenic Intergenic -3775 NM_019971 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_190_150_0.0438254456219385_7.26031746213605_0.326578367126945 chr1 59763491 59764995 + 0.326578367126945 NA promoter-TSS (NM_007561) promoter-TSS (NM_007561) -36 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak1_132_104_0.0495220068799105_6.73900652110608_0.326519102241958 chr11 19924181 19925666 + 0.326519102241958 NA 5' UTR (NM_033523, exon 1 of 6) 5' UTR (NM_033523, exon 1 of 6) 481 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-4 chr15 88862269 88862819 + 0.326417267106726 NA 5' UTR (NM_145478, exon 1 of 6) 5' UTR (NM_145478, exon 1 of 6) 350 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding unique_peak2_44_40_-0.1461838571915_5.28446007602233_0.326417267106726 chr8 27234061 27234650 + 0.326417267106726 NA Intergenic Intergenic -4767 NM_013462 11556 Mm.278475 NM_013462 ENSMUSG00000031489 Adrb3 Adrb-3 adrenergic receptor, beta 3 protein-coding common_peak2_47_37_0.0558931534284204_5.2758740901578_0.326417267106726 chr11 116853302 116853696 + 0.326417267106726 NA promoter-TSS (NM_011358) promoter-TSS (NM_011358) -263 NM_001361585 69900 Mm.348004 NM_178620 ENSMUSG00000020818 Mfsd11 2600014M03Rik major facilitator superfamily domain containing 11 protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-9 chr6 52221421 52222052 + 0.326417267106726 NA Intergenic CpG -3163 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak2_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-5 chr7 80232038 80232694 + 0.326417267106726 NA promoter-TSS (NM_178752) promoter-TSS (NM_178752) 439 NM_001291276 23991 Mm.30217 NM_011870 ENSMUSG00000030538 Cib1 Cibkip|Kip|Prkdcip calcium and integrin binding 1 (calmyrin) protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-8 chr7 122101487 122101845 + 0.326417267106726 NA exon (NM_028177, exon 1 of 5) exon (NM_028177, exon 1 of 5) 182 NR_153798 70316 Mm.3014 NM_028177 ENSMUSG00000030869 Ndufab1 2210401F17Rik|2310039H15Rik|2610003B19Rik|8kDa|9130423F15Rik|ACP|CI-SDAP|SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 protein-coding common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-2 chr19 6235958 6236272 + 0.326417267106726 NA promoter-TSS (NM_198168) promoter-TSS (NM_198168) -275 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726 chr1 155158821 155159300 + 0.326417267106726 NA intron (NM_021433, intron 1 of 7) CpG 357 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak2_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-3 chr8 70792134 70792462 + 0.326417267106726 NA exon (NM_199308, exon 1 of 26) exon (NM_199308, exon 1 of 26) 135 NM_199308 546071 Mm.250731 NM_199308 ENSMUSG00000031833 Mast3 BC024265|mKIAA0561 microtubule associated serine/threonine kinase 3 protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-4 chr17 25773873 25774565 + 0.326417267106726 NA intron (NM_026238, intron 1 of 10) intron (NM_026238, intron 1 of 10) 443 NM_026238 67563 Mm.24201 NM_026238 ENSMUSG00000002280 Narfl 9030612I22Rik|AI504405|PRN nuclear prelamin A recognition factor-like protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-2 chr11 62023571 62024062 + 0.326417267106726 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) -53208 NM_001029936 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding common_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-6 chr2 30773287 30773835 + 0.326417267106726 NA Intergenic Intergenic 28176 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-3 chr15 85555960 85556469 + 0.326417267106726 NA intron (NM_009528, intron 2 of 3) intron (NM_009528, intron 2 of 3) 21856 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-8 chr3 96268204 96268840 + 0.326417267106726 NA promoter-TSS (NM_178215) promoter-TSS (NM_178215) -132 NM_178215 319154 Mm.383293 NM_178215 ENSMUSG00000074403 Hist2h3b H3-615|H3-616 histone cluster 2, H3b protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-6 chr19 11966135 11966748 + 0.326417267106726 NA intron (NM_001033174, intron 1 of 13) intron (NM_001033174, intron 1 of 13) 597 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-4 chr4 150237286 150237675 + 0.326417267106726 NA intron (NM_023119, intron 1 of 11) intron (NM_023119, intron 1 of 11) 156 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-7 chr8 122057214 122057895 + 0.326417267106726 NA Intergenic Intergenic 79530 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-3 chr12 77970415 77971118 + 0.326417267106726 NA Intergenic MIR|SINE|MIR -255889 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-7 chr19 32188542 32189103 + 0.326417267106726 NA intron (NM_144792, intron 5 of 9) ORR1G|LTR|ERVL-MaLR 22191 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding unique_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726 chr12 104896886 104897414 + 0.326417267106726 NA Intergenic Intergenic -32074 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-2 chr11 88718431 88718893 + 0.326417267106726 NA promoter-TSS (NM_001201341) promoter-TSS (NM_001201341) 19 NR_038058 193280 Mm.396842 NR_038058 C030037D09Rik 9330160M04 RIKEN cDNA C030037D09 gene ncRNA common_peak2_44_40_-0.1461838571915_5.28446007602233_0.326417267106726 chr12 81748310 81749053 + 0.326417267106726 NA intron (NM_001174107, intron 2 of 10) intron (NM_001174107, intron 2 of 10) 32489 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-5 chr13 45685338 45685925 + 0.326417267106726 NA intron (NM_001199304, intron 5 of 6) intron (NM_001199304, intron 5 of 6) 178187 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726 chr10 17585341 17586102 + 0.326417267106726 NA Intergenic Intergenic -137507 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-9 chr8 35915238 35915684 + 0.326417267106726 NA Intergenic Intergenic -32504 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726 chr1 156674493 156674967 + 0.326417267106726 NA promoter-TSS (NM_023141) promoter-TSS (NM_023141) -391 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-5 chr5 100566681 100567263 + 0.326417267106726 NA intron (NM_139198, intron 1 of 4) intron (NM_139198, intron 1 of 4) 5233 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak2_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-2 chr3 95434438 95434849 + 0.326417267106726 NA intron (NM_001037737, intron 1 of 21) CpG 253 NM_001037737 11863 Mm.250265 NM_009709 ENSMUSG00000015522 Arnt D3Ertd557e|Drnt|ESTM42|Hif1b|W08714|bHLHe2|mKIAA4051 aryl hydrocarbon receptor nuclear translocator protein-coding common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-5 chr6 72544121 72544892 + 0.326417267106726 NA promoter-TSS (NM_001271415) promoter-TSS (NM_001271415) -31 NM_001271415 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-2 chr7 122101471 122101839 + 0.326417267106726 NA exon (NM_028177, exon 1 of 5) exon (NM_028177, exon 1 of 5) 193 NR_153798 70316 Mm.3014 NM_028177 ENSMUSG00000030869 Ndufab1 2210401F17Rik|2310039H15Rik|2610003B19Rik|8kDa|9130423F15Rik|ACP|CI-SDAP|SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 protein-coding common_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-5 chr18 37934874 37935449 + 0.326417267106726 NA intron (NM_001305981, intron 1 of 28) CpG 315 NM_001305981 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-4 chr11 120573466 120573997 + 0.326417267106726 NA promoter-TSS (NM_011032) promoter-TSS (NM_011032) -478 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-7 chr6 116207705 116208338 + 0.326417267106726 NA promoter-TSS (NM_026585) promoter-TSS (NM_026585) -12 NM_026585 28006 Mm.28524 NM_026585 ENSMUSG00000024104 Washc2 A130095H06|C530005J20Rik|D6Wsu116e|Fam21 WASH complex subunit 2 protein-coding common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726 chr11 77792065 77793013 + 0.326417267106726 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) -8759 NM_001291214 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-3 chr11 88553345 88554156 + 0.326417267106726 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -65501 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-6 chr7 90302283 90302820 + 0.326417267106726 NA non-coding (NR_110348, exon 1 of 9) non-coding (NR_110348, exon 1 of 9) 196 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-4 chr7 65468995 65469694 + 0.326417267106726 NA Intergenic B2_Mm2|SINE|B2 -98100 NM_009386 21872 Mm.4342 NM_009386 ENSMUSG00000030516 Tjp1 ZO1 tight junction protein 1 protein-coding common_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726-3 chr2 117881184 117881874 + 0.326417267106726 NA intron (NR_040631, intron 3 of 5) intron (NR_040631, intron 3 of 5) 59601 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-2 chr10 127195063 127195615 + 0.326417267106726 NA promoter-TSS (NR_045715) promoter-TSS (NR_045715) 90 NR_045716 100038591 Mm.441071 NR_045715 ENSMUSG00000097331 F420014N23Rik - RIKEN cDNA F420014N23 gene ncRNA unique_peak1_47_37_0.0558931534284204_5.2758740901578_0.326417267106726 chr7 144611878 144612973 + 0.326417267106726 NA intron (NM_001242349, intron 15 of 24) intron (NM_001242349, intron 15 of 24) -29989 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_48_37_0.0854306299224694_5.29064282840482_0.326417267106726-6 chr5 151113137 151113614 + 0.326417267106726 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 76818 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_44_40_-0.1461838571915_5.28446007602233_0.326417267106726-3 chr4 43492999 43493751 + 0.326417267106726 NA promoter-TSS (NR_001460) promoter-TSS (NR_001460) 10 NM_001037913 622404 Mm.289109 NM_001037913 ENSMUSG00000028461 Ccdc107 - coiled-coil domain containing 107 protein-coding common_peak1_633_523_-0.0324941506057357_9.01717592623458_0.326416769404937 chr19 5809402 5813214 + 0.326416769404937 NA Intergenic Intergenic -8636 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_127_110_-0.0855407608520427_6.75164548592408_0.326281951313147 chr8 86860568 86862834 + 0.326281951313147 NA exon (NM_030563, exon 2 of 7) exon (NM_030563, exon 2 of 7) 23557 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_127_110_-0.0855407608520427_6.75164548592408_0.326281951313147 chr13 97248180 97249642 + 0.326281951313147 NA intron (NM_007930, intron 2 of 2) intron (NM_007930, intron 2 of 2) 7806 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak2_193_152_0.0471677321451818_7.28097170876524_0.326248669277751 chr19 4113313 4114940 + 0.326248669277751 NA TTS (NR_075078) TTS (NR_075078) 7449 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak2_81_71_-0.0989654338418742_6.12044228452138_0.326210013932454 chr4 48472671 48473364 + 0.326210013932454 NA intron (NM_172304, intron 1 of 15) CpG 446 NM_172304 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak1_81_71_-0.0989654338418742_6.12044228452138_0.326210013932454-2 chr9 99132221 99132916 + 0.326210013932454 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 7643 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak2_86_67_0.0682857823543817_6.12160573242753_0.326210013932454-2 chr11 69913678 69914644 + 0.326210013932454 NA TTS (NM_001291119) TTS (NM_001291119) 127 NM_019726 56310 Mm.477738 NM_019726 ENSMUSG00000023170 Gps2 AI505953|GPS-2 G protein pathway suppressor 2 protein-coding common_peak2_86_67_0.0682857823543817_6.12160573242753_0.326210013932454 chr1 155093262 155094223 + 0.326210013932454 NA Intergenic Intergenic 5894 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_86_67_0.0682857823543817_6.12160573242753_0.326210013932454-3 chr6 39592088 39592787 + 0.326210013932454 NA promoter-TSS (NM_001358797) promoter-TSS (NM_001358797) -128 NM_001358797 68198 Mm.29415 NM_026612 ENSMUSG00000002416 Ndufb2 1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 protein-coding common_peak1_81_71_-0.0989654338418742_6.12044228452138_0.326210013932454 chr5 115272197 115272882 + 0.326210013932454 NA 5' UTR (NM_016698, exon 1 of 17) 5' UTR (NM_016698, exon 1 of 17) 356 NM_001302448 50849 Mm.30051 NM_016698 ENSMUSG00000041740 Rnf10 AA675014|RIE2|mKIAA0262 ring finger protein 10 protein-coding common_peak1_86_67_0.0682857823543817_6.12160573242753_0.326210013932454-2 chr5 121660244 121661094 + 0.326210013932454 NA promoter-TSS (NM_001289544) promoter-TSS (NM_001289544) 106 NM_001289543 72399 Mm.153372 NM_028227 ENSMUSG00000029458 Brap 3010002G07Rik|BRAP2|IMP BRCA1 associated protein protein-coding common_peak1_86_67_0.0682857823543817_6.12160573242753_0.326210013932454 chr15 10890566 10891346 + 0.326210013932454 NA Intergenic Intergenic -61376 NM_030888 81799 Mm.280158 NM_030888 ENSMUSG00000058914 C1qtnf3 2310005P21Rik|CORS-26|CORS26|CTRP3|Corcs|Cors C1q and tumor necrosis factor related protein 3 protein-coding common_peak2_194_153_0.0451341755950576_7.28935362849243_0.326086991116354 chr15 85666706 85668038 + 0.326086991116354 NA Intergenic Intergenic -36401 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_194_153_0.0451341755950576_7.28935362849243_0.326086991116354-2 chr5 38559695 38561606 + 0.326086991116354 NA intron (NM_011715, intron 2 of 14) MIRb|SINE|MIR 945 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak2_135_106_0.054253911788817_6.76859394229555_0.32604917300157 chr18 60623162 60624127 + 0.32604917300157 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 661 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_82_72_-0.101500937989099_6.13907408988547_0.325850200743459-3 chr5 149390540 149391863 + 0.325850200743459 NA Intergenic B2_Mm2|SINE|B2 -20548 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_87_68_0.0635959662456465_6.14032243990099_0.325850200743459 chr3 105705039 105706038 + 0.325850200743459 NA promoter-TSS (NM_001163356) promoter-TSS (NM_001163356) 80 NM_001163356 109050 Mm.212591 NM_175398 ENSMUSG00000048458 Fam212b 6530418L21Rik|inka2 family with sequence similarity 212, member B protein-coding common_peak1_82_72_-0.101500937989099_6.13907408988547_0.325850200743459 chr11 116489667 116490816 + 0.325850200743459 NA 5' UTR (NM_026364, exon 1 of 10) 5' UTR (NM_026364, exon 1 of 10) 105 NM_026364 67763 Mm.25125 NM_026364 ENSMUSG00000015869 Prpsap1 5730409F23Rik|PAP39 phosphoribosyl pyrophosphate synthetase-associated protein 1 protein-coding common_peak2_87_68_0.0635959662456465_6.14032243990099_0.325850200743459-2 chr3 107850201 107851142 + 0.325850200743459 NA Intergenic Intergenic -26559 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak1_82_72_-0.101500937989099_6.13907408988547_0.325850200743459-2 chr17 56583760 56584550 + 0.325850200743459 NA promoter-TSS (NM_001163300) promoter-TSS (NM_001163300) 430 NM_001029979 224902 Mm.214973 NM_001029979 ENSMUSG00000042625 Safb2 AA389433|AI255170|mKIAA0138 scaffold attachment factor B2 protein-coding common_peak2_82_72_-0.101500937989099_6.13907408988547_0.325850200743459 chr5 102068960 102069901 + 0.325850200743459 NA intron (NM_172882, intron 1 of 66) CpG 491 NM_172882 72145 Mm.332522 NM_172882 ENSMUSG00000043940 Wdfy3 2610509D04Rik|ALFY|AW319683|B930017C24|BWF1|Bchs|D5Ertd66e|Ggtb3|ZFYVE25|mKIAA0993 WD repeat and FYVE domain containing 3 protein-coding common_peak1_87_68_0.0635959662456465_6.14032243990099_0.325850200743459 chr17 35771363 35772563 + 0.325850200743459 NA promoter-TSS (NR_045459) promoter-TSS (NR_045459) -487 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak2_136_107_0.0513280719523115_6.78055153813962_0.325820647467598 chr6 17483786 17485271 + 0.325820647467598 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 20571 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567 chr11 82015912 82016770 + 0.325774238121567 NA Intergenic Intergenic -19236 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_49_38_0.07689664329006_5.32385054050728_0.325774238121567-5 chr9 123924861 123925577 + 0.325774238121567 NA Intergenic CpG 43473 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-6 chr3 106547323 106547722 + 0.325774238121567 NA promoter-TSS (NM_026013) promoter-TSS (NM_026013) 103 NM_001357818 99712 Mm.429443 NM_133869 ENSMUSG00000040774 Cept1 9930118K05Rik|mCEPT1 choline/ethanolaminephosphotransferase 1 protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-2 chr12 73809565 73810104 + 0.325774238121567 NA Intergenic Intergenic -91490 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak1_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-3 chr15 27414454 27414873 + 0.325774238121567 NA Intergenic Intergenic -52014 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_49_38_0.07689664329006_5.32385054050728_0.325774238121567-2 chr7 66575595 66576247 + 0.325774238121567 NA Intergenic Intergenic 113640 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak2_49_38_0.07689664329006_5.32385054050728_0.325774238121567 chr17 66101100 66101470 + 0.325774238121567 NA intron (NM_001278415, intron 1 of 8) CpG 274 NM_001278415 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak1_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-6 chr9 114781133 114781640 + 0.325774238121567 NA intron (NM_001252479, intron 1 of 3) CpG 607 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding common_peak1_49_38_0.07689664329006_5.32385054050728_0.325774238121567-2 chr19 9082152 9082495 + 0.325774238121567 NA Intergenic Intergenic 5633 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-8 chr8 9131602 9132150 + 0.325774238121567 NA non-coding (NR_045854, exon 1 of 4) non-coding (NR_045854, exon 1 of 4) 412 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA common_peak1_49_38_0.07689664329006_5.32385054050728_0.325774238121567 chr1 64600257 64601183 + 0.325774238121567 NA 3' UTR (NM_009952, exon 9 of 9) 3' UTR (NM_009952, exon 9 of 9) 16448 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-3 chr12 85605103 85605680 + 0.325774238121567 NA intron (NM_001205053, intron 1 of 3) intron (NM_001205053, intron 1 of 3) 5373 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_49_38_0.07689664329006_5.32385054050728_0.325774238121567-4 chr4 133277249 133277736 + 0.325774238121567 NA intron (NM_025667, intron 1 of 5) CpG 298 NM_025667 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding common_peak1_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-4 chr3 96727862 96728380 + 0.325774238121567 NA promoter-TSS (NM_028925) promoter-TSS (NM_028925) 510 NM_026406 67845 Mm.386792 NM_026406 ENSMUSG00000028098 Rnf115 2610028E05Rik|AU042696|Zfp364 ring finger protein 115 protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-7 chr7 44869200 44869677 + 0.325774238121567 NA exon (NM_133949, exon 1 of 12) exon (NM_133949, exon 1 of 12) 350 NM_133949 84113 Mm.42855 NM_133949 ENSMUSG00000038502 Ptov1 1110030G05Rik|AU041779|Gcap3 prostate tumor over expressed gene 1 protein-coding common_peak1_45_41_-0.149464120982506_5.31758536228751_0.325774238121567 chr13 108039694 108040398 + 0.325774238121567 NA Intergenic Intergenic -4428 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-2 chr15 25877287 25878393 + 0.325774238121567 NA intron (NM_001034851, intron 1 of 8) intron (NM_001034851, intron 1 of 8) 34542 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding common_peak1_49_38_0.07689664329006_5.32385054050728_0.325774238121567-3 chr3 95696014 95696425 + 0.325774238121567 NA Intergenic Intergenic -8302 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-5 chr7 44869231 44869692 + 0.325774238121567 NA exon (NM_133949, exon 1 of 12) exon (NM_133949, exon 1 of 12) 327 NM_133949 84113 Mm.42855 NM_133949 ENSMUSG00000038502 Ptov1 1110030G05Rik|AU041779|Gcap3 prostate tumor over expressed gene 1 protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-4 chr15 77823183 77823785 + 0.325774238121567 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 18691 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_45_41_-0.149464120982506_5.31758536228751_0.325774238121567-5 chr3 7613198 7613697 + 0.325774238121567 NA promoter-TSS (NM_001313890) promoter-TSS (NM_001313890) 313 NM_008371 16196 Mm.3825 NM_008371 ENSMUSG00000040329 Il7 A630026I06Rik|Il-7|hlb368 interleukin 7 protein-coding common_peak2_189_161_-0.0651396087320864_7.30728019851858_0.325769775589393 chr9 63926982 63929230 + 0.325769775589393 NA Intergenic Intergenic 93953 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_137_108_0.048449599673539_6.7924091246137_0.325596259211374 chr16 22264805 22265898 + 0.325596259211374 NA intron (NM_001330555, intron 1 of 9) CpG 654 NM_001330554 20462 Mm.210352 NM_009186 ENSMUSG00000022858 Tra2b 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta transformer 2 beta protein-coding common_peak1_670_531_0.0268990330344625_9.06873195201842_0.325517671715974 chr19 5842022 5846483 + 0.325517671715974 NA non-coding (NR_003513, exon 1 of 1) non-coding (NR_003513, exon 1 of 1) 1226 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_83_73_-0.103973649182814_6.15746654103754_0.325500527219172 chr13 35741481 35742740 + 0.325500527219172 NA intron (NM_001123386, intron 1 of 6) CpG 708 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_83_73_-0.103973649182814_6.15746654103754_0.325500527219172 chr4 155250044 155250835 + 0.325500527219172 NA non-coding (NR_033802, exon 1 of 3) non-coding (NR_033802, exon 1 of 3) 473 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak1_88_69_0.0590242094549609_6.15879512167245_0.325500527219172-2 chr3 58524950 58525703 + 0.325500527219172 NA promoter-TSS (NM_001005509) promoter-TSS (NM_001005509) -495 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak1_88_69_0.0590242094549609_6.15879512167245_0.325500527219172 chr10 59615867 59616662 + 0.325500527219172 NA intron (NM_001033259, intron 1 of 7) CpG 428 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_88_69_0.0590242094549609_6.15879512167245_0.325500527219172 chr18 67390745 67391299 + 0.325500527219172 NA intron (NM_026473, intron 1 of 3) CpG 291 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding common_peak1_192_163_-0.0603996341478918_7.32735218754414_0.325460491862855 chr15 10661409 10663207 + 0.325460491862855 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 51232 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak2_355_281_0.0346459148546465_8.15687430982612_0.325412240782861 chr8 122184405 122187775 + 0.325412240782861 NA Intergenic (CAT)n|Simple_repeat|Simple_repeat -96051 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_132_114_-0.0817225263983419_6.8046287877452_0.32537589687777 chr9 44766956 44767850 + 0.32537589687777 NA intron (NM_145985, intron 1 of 9) CpG 405 NM_145985 213827 Mm.371682 NM_145985 ENSMUSG00000032096 Arcn1 4632432M07Rik|nur17 archain 1 protein-coding common_peak1_138_109_0.0456173378584266_6.80416838245387_0.32537589687777 chr12 17544936 17546523 + 0.32537589687777 NA intron (NM_013614, intron 1 of 11) intron (NM_013614, intron 1 of 11) 856 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak2_132_114_-0.0817225263983419_6.8046287877452_0.32537589687777 chr2 130178408 130179322 + 0.32537589687777 NA intron (NM_009225, intron 1 of 6) CpG 499 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding common_peak2_139_109_0.0558863198746558_6.80930287346199_0.32537589687777 chr19 17255746 17256902 + 0.32537589687777 NA Intergenic Intergenic 83181 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_193_164_-0.0617666394079821_7.33543889454183_0.325308732029547 chr1 133131332 133133004 + 0.325308732029547 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 1002 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-15 chr8 64548143 64548346 + 0.325169893479371 NA Intergenic Intergenic -33803 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-14 chr6 115544750 115544962 + 0.325169893479371 NA intron (NM_199033, intron 1 of 11) CpG 152 NM_199033 381802 Mm.291208 NM_199033 ENSMUSG00000042389 Tsen2 AU067695 tRNA splicing endonuclease subunit 2 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-10 chr17 78444432 78444665 + 0.325169893479371 NA Intergenic Intergenic -26396 NM_001285940 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-9 chr6 90357905 90358232 + 0.325169893479371 NA intron (NM_144940, intron 17 of 19) intron (NM_144940, intron 17 of 19) -11426 NM_173002 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding unique_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371 chr10 100486980 100487308 + 0.325169893479371 NA intron (NM_001033332, intron 1 of 12) intron (NM_001033332, intron 1 of 12) 203 NM_001033332 237500 Mm.296805 NM_001033332 ENSMUSG00000036676 Tmtc3 9130014E20Rik|B130008E12Rik|mSmile transmembrane and tetratricopeptide repeat containing 3 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-16 chr9 53247765 53248030 + 0.325169893479371 NA exon (NM_029936, exon 1 of 18) exon (NM_029936, exon 1 of 18) 215 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-4 chr18 74285625 74286077 + 0.325169893479371 NA intron (NR_029424, intron 2 of 8) intron (NR_029424, intron 2 of 8) 2751 NR_029424 74453 Mm.182293 NM_028948 ENSMUSG00000035394 Cfap53 4933415I03Rik|Ccdc11 cilia and flagella associated protein 53 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371 chr1 133019901 133020128 + 0.325169893479371 NA intron (NM_008575, intron 1 of 11) intron (NM_008575, intron 1 of 11) 5402 NR_126506 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-14 chr3 9000888 9001282 + 0.325169893479371 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 3119 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-25 chrX 73824520 73824913 + 0.325169893479371 NA 5' UTR (NM_001290540, exon 1 of 6) 5' UTR (NM_001290540, exon 1 of 6) 253 NM_001029868 245469 Mm.103782 NM_001029868 ENSMUSG00000002006 Pdzd4 B230341P03|D130075J17Rik|Kiaa1444-hp|LU1|PDZRN4L|Pdzk4|Pdzrnk4l|Xlu PDZ domain containing 4 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-5 chr15 5241949 5242307 + 0.325169893479371 NA intron (NM_001136079, intron 2 of 2) intron (NM_001136079, intron 2 of 2) 2059 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-14 chr7 65693414 65693777 + 0.325169893479371 NA intron (NM_026795, intron 1 of 4) CpG 178 NM_026795 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-4 chr15 31335095 31335444 + 0.325169893479371 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 32490 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-2 chr1 150145482 150145723 + 0.325169893479371 NA Intergenic Intergenic 19346 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA unique_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371 chr15 93734621 93734986 + 0.325169893479371 NA Intergenic Intergenic -138912 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding unique_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-3 chr2 150608135 150608435 + 0.325169893479371 NA intron (NM_001356491, intron 1 of 9) intron (NM_001356491, intron 1 of 9) 282 NM_001356491 71881 Mm.26599 NM_027977 ENSMUSG00000033096 Apmap 2310001A20Rik|AI314817 adipocyte plasma membrane associated protein protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-2 chr11 117263549 117264021 + 0.325169893479371 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -2461 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-13 chr2 158230408 158230602 + 0.325169893479371 NA Intergenic Intergenic -1281 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371 chr1 171471357 171471718 + 0.325169893479371 NA Intergenic Intergenic -31941 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371 chr11 35963876 35964228 + 0.325169893479371 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 16037 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-2 chr1 184140379 184140627 + 0.325169893479371 NA Intergenic Intergenic 106122 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-8 chr16 92059202 92059588 + 0.325169893479371 NA intron (NM_080456, intron 1 of 2) intron (NM_080456, intron 1 of 2) 1059 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-5 chr3 87981280 87981548 + 0.325169893479371 NA TTS (NM_016701) TTS (NM_016701) 10321 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-8 chr16 4004048 4004372 + 0.325169893479371 NA Intergenic B2_Mm2|SINE|B2 -2532 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-7 chr14 79426629 79426834 + 0.325169893479371 NA exon (NM_001024135, exon 1 of 1) exon (NM_001024135, exon 1 of 1) 220 NM_001024135 211255 Mm.284526 NM_001024135 ENSMUSG00000043881 Kbtbd7 1110008P08Rik|AU045792|Gm295 kelch repeat and BTB (POZ) domain containing 7 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-9 chr4 123622127 123622433 + 0.325169893479371 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) 5860 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-11 chr4 141682752 141683116 + 0.325169893479371 NA TTS (NM_023544) TTS (NM_023544) 2782 NM_023544 69994 Mm.441022 NM_023544 ENSMUSG00000040715 Rsc1a1 1700027M01Rik|Rs1 regulatory solute carrier protein, family 1, member 1 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-8 chr2 25501557 25501989 + 0.325169893479371 NA promoter-TSS (NM_001271777) promoter-TSS (NM_001271777) -54 NM_001271777 69379 Mm.24596 NM_027062 ENSMUSG00000015083 C8g - complement component 8, gamma polypeptide protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371 chr1 60179985 60180242 + 0.325169893479371 NA promoter-TSS (NM_173444) promoter-TSS (NM_173444) -486 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-4 chr12 111704218 111704517 + 0.325169893479371 NA Intergenic B1_Mus1|SINE|Alu 8586 NM_001324481 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-18 chr4 137077026 137077233 + 0.325169893479371 NA Intergenic Intergenic -28434 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-6 chr15 76196553 76196843 + 0.325169893479371 NA promoter-TSS (NM_201394) promoter-TSS (NM_201394) -988 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-17 chr9 100605670 100605871 + 0.325169893479371 NA Intergenic Intergenic -34685 NM_001101483 245020 Mm.236289 NM_001101483 ENSMUSG00000070287 Slc35g2 Gm519|Tmem22 solute carrier family 35, member G2 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-3 chr14 30671438 30671709 + 0.325169893479371 NA intron (NM_177815, intron 6 of 12) intron (NM_177815, intron 6 of 12) 17198 NM_177815 328370 Mm.259657 NM_177815 ENSMUSG00000052395 Rft1 D930025H04 RFT1 homolog protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371 chr12 104898889 104899420 + 0.325169893479371 NA Intergenic Intergenic -34078 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-12 chrX 7188461 7188862 + 0.325169893479371 NA promoter-TSS (NM_016691) promoter-TSS (NM_016691) 53 NM_016691 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-6 chr19 47244305 47244531 + 0.325169893479371 NA intron (NM_001163480, intron 3 of 5) intron (NM_001163480, intron 3 of 5) 15575 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-4 chr11 105439422 105439666 + 0.325169893479371 NA intron (NM_001039242, intron 3 of 5) intron (NM_001039242, intron 3 of 5) 17191 NM_172568 632687 Mm.121570 NM_172568 ENSMUSG00000078627 March10 4933417C16Rik|AV039223|Rnf190 membrane-associated ring finger (C3HC4) 10 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-10 chr5 90706064 90706358 + 0.325169893479371 NA Intergenic Intergenic -53087 NM_009141 20311 Mm.4660 NM_009141 ENSMUSG00000029371 Cxcl5 AMCF-II|Cxcl6|ENA-78|GCP-2|LIX|Scyb5|Scyb6 chemokine (C-X-C motif) ligand 5 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-15 chr6 137125811 137126203 + 0.325169893479371 NA intron (NM_181988, intron 2 of 4) intron (NM_181988, intron 2 of 4) 43711 NM_001164214 232441 Mm.46233 NM_181988 ENSMUSG00000030222 Rerg - RAS-like, estrogen-regulated, growth-inhibitor protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-12 chr18 55196381 55196651 + 0.325169893479371 NA Intergenic Intergenic -203925 NM_001360787 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-3 chr12 8357926 8358172 + 0.325169893479371 NA Intergenic Intergenic 44616 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-7 chr3 79888418 79888886 + 0.325169893479371 NA intron (NM_133187, intron 1 of 3) intron (NM_133187, intron 1 of 3) 2722 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-14 chr6 112869581 112869892 + 0.325169893479371 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 77530 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-9 chr4 150901325 150901576 + 0.325169893479371 NA intron (NM_020569, intron 5 of 6) intron (NM_020569, intron 5 of 6) 8471 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-7 chr4 137697424 137697617 + 0.325169893479371 NA intron (NR_138594, intron 1 of 1) intron (NR_138594, intron 1 of 1) 9086 NR_138594 69808 Mm.437203 NR_138594 Rap1gapos 1810058N05Rik RAP1 GTPase activating protein, opposite strand ncRNA unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-5 chr12 81665328 81665800 + 0.325169893479371 NA 3' UTR (NM_001033149, exon 3 of 3) 3' UTR (NM_001033149, exon 3 of 3) 34315 NM_001033149 69480 Mm.130002 NM_001033149 ENSMUSG00000042734 Ttc9 - tetratricopeptide repeat domain 9 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-3 chr11 117991667 117992014 + 0.325169893479371 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 4983 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-19 chr8 84198116 84198333 + 0.325169893479371 NA Intergenic Intergenic -10294 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-17 chrX 136172496 136172896 + 0.325169893479371 NA promoter-TSS (NM_001168578) promoter-TSS (NM_001168578) -445 NM_025703 66684 Mm.182094 NM_025703 ENSMUSG00000051579 Tceal8 3930402F23Rik transcription elongation factor A (SII)-like 8 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-2 chr10 116580725 116580981 + 0.325169893479371 NA promoter-TSS (NM_001359248) promoter-TSS (NM_001359248) -317 NM_001359248 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-11 chr18 6516248 6516467 + 0.325169893479371 NA promoter-TSS (NM_007935) promoter-TSS (NM_007935) -249 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-7 chr3 121481248 121481581 + 0.325169893479371 NA intron (NM_145394, intron 12 of 14) intron (NM_145394, intron 12 of 14) 50930 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-6 chr2 158230424 158230720 + 0.325169893479371 NA Intergenic Intergenic -1348 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-12 chr5 104434472 104434894 + 0.325169893479371 NA promoter-TSS (NM_001204202) promoter-TSS (NM_001204202) -428 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-23 chr8 111716427 111716647 + 0.325169893479371 NA intron (NM_001198839, intron 2 of 6) intron (NM_001198839, intron 2 of 6) 15599 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-18 chr9 106453412 106453690 + 0.325169893479371 NA promoter-TSS (NM_021567) promoter-TSS (NM_021567) -287 NM_021567 59092 Mm.286394 NM_021567 ENSMUSG00000023495 Pcbp4 1200003L19Rik|AlphaCP-4 poly(rC) binding protein 4 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-3 chr14 30671417 30671732 + 0.325169893479371 NA intron (NM_177815, intron 6 of 12) intron (NM_177815, intron 6 of 12) 17199 NM_177815 328370 Mm.259657 NM_177815 ENSMUSG00000052395 Rft1 D930025H04 RFT1 homolog protein-coding unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-2 chr1 91540898 91541357 + 0.325169893479371 NA promoter-TSS (NM_023046) promoter-TSS (NM_023046) 47 NM_023046 65247 Mm.234152 NM_023046 ENSMUSG00000026311 Asb1 1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146 ankyrin repeat and SOCS box-containing 1 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-10 chr6 82890917 82891252 + 0.325169893479371 NA Intergenic Intergenic -9231 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-6 chr3 57573716 57574006 + 0.325169893479371 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 2015 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-16 chrX 113185145 113185466 + 0.325169893479371 NA intron (NM_018818, intron 1 of 14) intron (NM_018818, intron 1 of 14) 210 NM_018818 12662 Mm.257316 NM_018818 ENSMUSG00000025531 Chm Rep-1 choroidermia (RAB escort protein 1) protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-4 chr13 28718344 28718852 + 0.325169893479371 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -7725 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-11 chr9 35116496 35116722 + 0.325169893479371 NA promoter-TSS (NR_029475) promoter-TSS (NR_029475) -119 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-7 chr4 148523007 148523296 + 0.325169893479371 NA intron (NM_020009, intron 31 of 57) B1_Mm|SINE|Alu -22689 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371 chr11 97988406 97988698 + 0.325169893479371 NA Intergenic Intergenic -2106 NM_001163608 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-6 chr13 58273620 58274066 + 0.325169893479371 NA intron (NM_019832, intron 1 of 11) CpG 345 NM_019832 56278 Mm.296625 NM_019832 ENSMUSG00000021552 Gkap1 42kDa|4933400B15Rik|D13Ertd340e|Gkap42 G kinase anchoring protein 1 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-6 chr15 76078079 76078407 + 0.325169893479371 NA intron (NM_028364, intron 1 of 11) intron (NM_028364, intron 1 of 11) 2627 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding unique_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-5 chr7 29982174 29982502 + 0.325169893479371 NA Intergenic Intergenic -1617 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-5 chr2 79982683 79983042 + 0.325169893479371 NA intron (NM_001355141, intron 2 of 15) intron (NM_001355141, intron 2 of 15) 56040 NM_001355142 18573 Mm.40678 NM_016744 ENSMUSG00000059173 Pde1a AI987702|AW125737 phosphodiesterase 1A, calmodulin-dependent protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-4 chr12 25094139 25094670 + 0.325169893479371 NA 3' UTR (NM_010496, exon 3 of 3) 3' UTR (NM_010496, exon 3 of 3) 1688 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-20 chr8 122348126 122348466 + 0.325169893479371 NA Intergenic Intergenic 14532 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-11 chr5 115238087 115238362 + 0.325169893479371 NA exon (NM_026398, exon 3 of 6) exon (NM_026398, exon 3 of 6) 2373 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-3 chr1 191312571 191312872 + 0.325169893479371 NA intron (NM_025424, intron 1 of 3) intron (NM_025424, intron 1 of 3) 5397 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding unique_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-3 chr5 143047590 143047954 + 0.325169893479371 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 65248 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-9 chr16 18687210 18687423 + 0.325169893479371 NA Intergenic Intergenic -57378 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-8 chr4 45523388 45523705 + 0.325169893479371 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 7282 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-19 chr4 145272462 145272820 + 0.325169893479371 NA intron (NM_009401, intron 12 of 12) intron (NM_009401, intron 12 of 12) -25771 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-12 chr2 25657056 25657290 + 0.325169893479371 NA promoter-TSS (NM_007947) promoter-TSS (NM_007947) -779 NM_007947 13863 Mm.12867 NM_007947 ENSMUSG00000026937 Lcn5 E-RABP|Erabp|MEP10 lipocalin 5 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-22 chrX 153433288 153433679 + 0.325169893479371 NA Intergenic Intergenic -64749 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-2 chr11 103967611 103967998 + 0.325169893479371 NA intron (NM_007477, intron 1 of 4) intron (NM_007477, intron 1 of 4) 933 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-10 chr4 133038731 133038933 + 0.325169893479371 NA intron (NM_146155, intron 2 of 6) CpG 27326 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-10 chr5 66468972 66469475 + 0.325169893479371 NA intron (NM_001310626, intron 3 of 15) intron (NM_001310626, intron 3 of 15) -131558 NM_001201416 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-12 chr9 51056306 51056625 + 0.325169893479371 NA TTS (NM_001033534) TTS (NM_001033534) 20629 NM_001033534 244864 Mm.335152 NM_001033534 ENSMUSG00000060594 Layn E030012M19Rik|Gm511 layilin protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-13 chr7 109547054 109547434 + 0.325169893479371 NA intron (NM_001001326, intron 4 of 19) intron (NM_001001326, intron 4 of 19) 27112 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-21 chr9 40449400 40449733 + 0.325169893479371 NA intron (NM_001357617, intron 1 of 20) intron (NM_001357617, intron 1 of 20) 6198 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-5 chr14 77197219 77197461 + 0.325169893479371 NA intron (NM_001253759, intron 1 of 19) intron (NM_001253759, intron 1 of 19) 40577 NM_172813 239188 Mm.441158 NM_172813 ENSMUSG00000022012 Enox1 B230207J08|D230005D02Rik ecto-NOX disulfide-thiol exchanger 1 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-3 chr13 108158341 108158557 + 0.325169893479371 NA promoter-TSS (NM_001362403) promoter-TSS (NM_001362403) 176 NM_001360140 75597 Mm.276040 NM_001127346 ENSMUSG00000068184 Ndufaf2 1810058I14Rik|C86051|Ndufa12l|mimitin NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-17 chr7 84087792 84088119 + 0.325169893479371 NA Intergenic Intergenic -1450 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-5 chr15 61239925 61240260 + 0.325169893479371 NA Intergenic Intergenic -318822 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-9 chr4 116557872 116558163 + 0.325169893479371 NA intron (NM_029868, intron 1 of 11) CpG 290 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-13 chr3 93495433 93495859 + 0.325169893479371 NA Intergenic Intergenic -24850 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-10 chr4 133012125 133012435 + 0.325169893479371 NA 5' UTR (NM_146155, exon 2 of 7) 5' UTR (NM_146155, exon 2 of 7) 774 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-21 chr7 68026069 68026430 + 0.325169893479371 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 73992 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-16 chrX 164975460 164975952 + 0.325169893479371 NA intron (NM_029730, intron 2 of 14) intron (NM_029730, intron 2 of 14) 4669 NM_001290523 76763 Mm.291758 NM_029730 ENSMUSG00000061778 Mospd2 2410013I23Rik motile sperm domain containing 2 protein-coding unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-8 chr5 149229326 149229568 + 0.325169893479371 NA Intergenic CpG -35557 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-18 chr7 89623005 89623276 + 0.325169893479371 NA Intergenic Intergenic -9678 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-8 chr3 95893422 95893662 + 0.325169893479371 NA promoter-TSS (NM_146134) promoter-TSS (NM_146134) -379 NM_146104 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-23 chrX 160138538 160138738 + 0.325169893479371 NA promoter-TSS (NM_008810) promoter-TSS (NM_008810) -208 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-9 chr5 36187129 36187580 + 0.325169893479371 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -16667 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-17 chr4 136286153 136286537 + 0.325169893479371 NA 5' UTR (NM_009557, exon 1 of 3) 5' UTR (NM_009557, exon 1 of 3) 278 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-14 chr7 120982624 120982855 + 0.325169893479371 NA promoter-TSS (NM_007672) promoter-TSS (NM_007672) 230 NM_028955 74466 Mm.189707 NM_028955 ENSMUSG00000030877 Mfsd13b 4933427G17Rik major facilitator superfamily domain containing 13B protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-3 chr15 83158859 83159154 + 0.325169893479371 NA intron (NM_029787, intron 7 of 8) intron (NM_029787, intron 7 of 8) 9361 NR_004432 104307 Mm.471434 NR_004432 ENSMUSG00000065176 Rnu12 - RNA U12, small nuclear snRNA common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-22 chr8 64524689 64524971 + 0.325169893479371 NA Intergenic Intergenic -10389 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-2 chr19 10578659 10578869 + 0.325169893479371 NA intron (NM_001362431, intron 2 of 7) intron (NM_001362431, intron 2 of 7) 1316 NM_001282067 225912 Mm.252701 NM_201351 ENSMUSG00000034445 Cyb561a3 2310004G04Rik|Cybasc3|Lcytb cytochrome b561 family, member A3 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-10 chr17 88627770 88628021 + 0.325169893479371 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 1340 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding unique_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-4 chr6 81943825 81944133 + 0.325169893479371 NA intron (NM_177884, intron 9 of 16) intron (NM_177884, intron 9 of 16) 20310 NM_177884 330361 Mm.474487 NM_177884 ENSMUSG00000035125 Gcfc2 A130099G21|AW146020|GCF2|Tcf9 GC-rich sequence DNA binding factor 2 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-8 chr4 106317433 106317815 + 0.325169893479371 NA intron (NM_183225, intron 1 of 67) intron (NM_183225, intron 1 of 67) 1411 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-5 chr13 41606001 41606388 + 0.325169893479371 NA promoter-TSS (NM_001163572) promoter-TSS (NM_001163572) -22 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-13 chr7 43562319 43562683 + 0.325169893479371 NA intron (NM_001008549, intron 1 of 4) intron (NM_001008549, intron 1 of 4) 131 NM_001008549 210104 Mm.333821 NM_001008549 ENSMUSG00000056592 Zfp658 - zinc finger protein 658 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-7 chr15 43650458 43650870 + 0.325169893479371 NA Intergenic Intergenic 173435 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-7 chr2 167063631 167063916 + 0.325169893479371 NA promoter-TSS (NM_001033196) promoter-TSS (NM_001033196) -758 NM_001033196 98999 Mm.297074 NM_001033196 ENSMUSG00000039501 Znfx1 AI481105|Astx3 zinc finger, NFX1-type containing 1 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-9 chr17 31855486 31855725 + 0.325169893479371 NA intron (NM_010831, intron 1 of 13) CpG-6228 199 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-6 chr4 118017291 118017595 + 0.325169893479371 NA intron (NM_001285520, intron 4 of 11) intron (NM_001285520, intron 4 of 11) -87680 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-10 chr8 24485268 24485617 + 0.325169893479371 NA promoter-TSS (NR_035483).2 promoter-TSS (NR_035483).2 -456 NR_035483 unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-6 chr17 46782785 46783112 + 0.325169893479371 NA promoter-TSS (NM_025433) promoter-TSS (NM_025433) -292 NM_025433 66229 Mm.218533 NM_025433 ENSMUSG00000063888 Rpl7l1 1500016H10Rik ribosomal protein L7-like 1 protein-coding unique_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-2 chr15 66542442 66542776 + 0.325169893479371 NA intron (NM_172514, intron 5 of 9) intron (NM_172514, intron 5 of 9) 18437 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-7 chr16 91729990 91730276 + 0.325169893479371 NA intron (NM_001110276, intron 1 of 15) CpG 762 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-16 chr3 122481549 122481852 + 0.325169893479371 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -1869 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-12 chr6 108212602 108212908 + 0.325169893479371 NA promoter-TSS (NM_010585) promoter-TSS (NM_010585) -341 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-3 chr12 17303361 17303774 + 0.325169893479371 NA intron (NM_133699, intron 4 of 13) intron (NM_133699, intron 4 of 13) 21163 NM_133699 68775 Mm.178798 NM_133699 ENSMUSG00000020566 Atp6v1c2 1110038G14Rik ATPase, H+ transporting, lysosomal V1 subunit C2 protein-coding unique_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-6 chr9 86571437 86571747 + 0.325169893479371 NA promoter-TSS (NM_001145969) promoter-TSS (NM_001145969) 250 NM_001163746 109785 Mm.390201 NM_028352 ENSMUSG00000056131 Pgm3 2810473H05Rik|Agm1|BB187688|C77933|PAGM|Pgm-3 phosphoglucomutase 3 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-11 chr5 91618819 91619325 + 0.325169893479371 NA intron (NM_145562, intron 3 of 3) intron (NM_145562, intron 3 of 3) 101372 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-4 chr11 116335486 116335768 + 0.325169893479371 NA promoter-TSS (NM_008240) promoter-TSS (NM_008240) -273 NM_008240 15223 Mm.378938 NM_008240 ENSMUSG00000034227 Foxj1 FKHL-13|HFH-4|Hfh4 forkhead box J1 protein-coding common_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-7 chr17 80766167 80766520 + 0.325169893479371 NA Intergenic Intergenic -38318 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-5 chr14 20819358 20819815 + 0.325169893479371 NA Intergenic Intergenic -17076 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-15 chr9 48480105 48480421 + 0.325169893479371 NA intron (NM_024233, intron 1 of 6) intron (NM_024233, intron 1 of 6) 348 NM_001357505 104444 Mm.21911 NM_024233 ENSMUSG00000032026 Rexo2 1810038D15Rik|AW107347|Rex2|Sfn|Smfn RNA exonuclease 2 protein-coding unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371 chr1 71831156 71831478 + 0.325169893479371 NA Intergenic Intergenic -56795 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-16 chr7 49552456 49552770 + 0.325169893479371 NA intron (NM_175272, intron 15 of 37) intron (NM_175272, intron 15 of 37) 84222 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-2 chr12 112597736 112598068 + 0.325169893479371 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 9118 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-11 chr18 44380756 44380968 + 0.325169893479371 NA intron (NM_027490, intron 1 of 10) CpG 362 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-8 chr5 137099151 137099468 + 0.325169893479371 NA Intergenic Intergenic 16898 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-4 chr15 7810391 7810609 + 0.325169893479371 NA 5' UTR (NM_001301332, exon 1 of 3) 5' UTR (NM_001301332, exon 1 of 3) 452 NM_001301332 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-8 chr2 167714010 167714219 + 0.325169893479371 NA Intergenic Intergenic 22937 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA unique_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-2 chr17 69115061 69115448 + 0.325169893479371 NA intron (NM_001355732, intron 1 of 21) B1_Mus1|SINE|Alu 39577 NM_001355732 13823 Mm.131135 NM_013813 ENSMUSG00000024044 Epb41l3 4.1B|DAL1P|Dal1|Epb4.1l3|NBL3 erythrocyte membrane protein band 4.1 like 3 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-13 chr6 72543541 72543776 + 0.325169893479371 NA promoter-TSS (NM_001271415) promoter-TSS (NM_001271415) -733 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-15 chr3 98356483 98356821 + 0.325169893479371 NA Intergenic Intergenic -16683 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-24 chr9 103305302 103305610 + 0.325169893479371 NA intron (NM_176979, intron 1 of 27) CpG 129 NM_176979 235559 Mm.259893 NM_176979 ENSMUSG00000032555 Topbp1 1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259 topoisomerase (DNA) II binding protein 1 protein-coding common_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371 chr1 172632619 172632932 + 0.325169893479371 NA exon (NM_026725, exon 1 of 2) exon (NM_026725, exon 1 of 2) 199 NM_026725 68440 Mm.33024 NM_026725 ENSMUSG00000026544 Dusp23 1300005N15Rik|LDP-3 dual specificity phosphatase 23 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-5 chr15 64476890 64477160 + 0.325169893479371 NA Intergenic Intergenic -94106 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-12 chr7 19076597 19076799 + 0.325169893479371 NA exon (NM_010058, exon 1 of 5) exon (NM_010058, exon 1 of 5) 498 NM_010058 13401 Mm.2852 NM_010058 ENSMUSG00000030410 Dmwd DMR-N9|Dm9 dystrophia myotonica-containing WD repeat motif protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-9 chr3 58310837 58311215 + 0.325169893479371 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -103694 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-11 chr7 125559941 125560467 + 0.325169893479371 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 7922 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-20 chr5 148954725 148954951 + 0.325169893479371 NA Intergenic Intergenic 4588 NR_040686 71473 Mm.90306 NR_040686 ENSMUSG00000079069 8430423G03Rik - RIKEN cDNA 8430423G03 gene ncRNA common_peak1_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-4 chr2 31449146 31449393 + 0.325169893479371 NA Intergenic Intergenic -21001 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding unique_peak2_20_19_-0.202338419294739_4.22075888523999_0.325169893479371-3 chr11 87573869 87574340 + 0.325169893479371 NA Intergenic Intergenic -4285 NM_001361936 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|Pnutl2 septin 4 protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371 chr1 86528325 86528600 + 0.325169893479371 NA intron (NM_008972, intron 1 of 4) CpG-365 1905 NM_001360830 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_19_19_-0.272231151915689_4.18581251892952_0.325169893479371-2 chr10 61451505 61451848 + 0.325169893479371 NA intron (NM_010124, intron 1 of 2) intron (NM_010124, intron 1 of 2) 993 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding unique_peak1_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-6 chr14 54254169 54254424 + 0.325169893479371 NA promoter-TSS (NM_001113358) promoter-TSS (NM_001113358) 167 NM_001205181 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding common_peak2_22_17_0.0799832799271867_4.20991664140591_0.325169893479371-15 chr8 122432664 122432891 + 0.325169893479371 NA TTS (NM_138656) TTS (NM_138656) 163 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak1_46_42_-0.152603451400044_5.34996302900208_0.325162986021101-2 chr8 86289379 86290011 + 0.325162986021101 NA Intergenic Intergenic 276895 NM_172912 244562 Mm.67485 NM_172912 ENSMUSG00000036872 Abcc12 4930467B22Rik|MRP9 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein-coding unique_peak1_50_39_0.0687383646765438_5.35629727722563_0.325162986021101 chr9 96753579 96754533 + 0.325162986021101 NA Intergenic Intergenic -1225 NR_015511 319859 Mm.259909 NM_177020 E030011O05Rik - RIKEN cDNA E030011O05 gene ncRNA common_peak2_46_42_-0.152603451400044_5.34996302900208_0.325162986021101-2 chr15 80173835 80174288 + 0.325162986021101 NA intron (NM_010795, intron 1 of 1) CpG 340 NM_010795 17309 Mm.299693 NM_010795 ENSMUSG00000042428 Mgat3 1110038J12Rik|AI848272|GnT-III mannoside acetylglucosaminyltransferase 3 protein-coding common_peak2_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-2 chr16 13588379 13589103 + 0.325162986021101 NA intron (NM_001358453, intron 20 of 22) intron (NM_001358453, intron 20 of 22) -68322 NR_037997 70100 Mm.158330 NR_037997 ENSMUSG00000099411 2310015D24Rik - RIKEN cDNA 2310015D24 gene ncRNA common_peak2_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-3 chr19 53409404 53409843 + 0.325162986021101 NA Intergenic Intergenic -18989 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak2_46_42_-0.152603451400044_5.34996302900208_0.325162986021101 chr1 151755351 151755974 + 0.325162986021101 NA promoter-TSS (NR_151473) promoter-TSS (NR_151473) 288 NM_001311166 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding unique_peak2_46_42_-0.152603451400044_5.34996302900208_0.325162986021101 chr15 57986219 57986950 + 0.325162986021101 NA intron (NM_173862, intron 1 of 3) intron (NM_173862, intron 1 of 3) 681 NM_173862 239463 Mm.221241 NM_173862 ENSMUSG00000051225 Fam83a - family with sequence similarity 83, member A protein-coding common_peak1_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-4 chr11 94404512 94404878 + 0.325162986021101 NA Intergenic Intergenic -11719 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak2_46_42_-0.152603451400044_5.34996302900208_0.325162986021101-4 chr9 34995525 34995971 + 0.325162986021101 NA intron (NM_001190912, intron 4 of 15) intron (NM_001190912, intron 4 of 15) -120980 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-5 chr3 18215024 18215574 + 0.325162986021101 NA intron (NM_007825, intron 1 of 5) intron (NM_007825, intron 1 of 5) 28039 NM_007825 13123 Mm.316000 NM_007825 ENSMUSG00000039519 Cyp7b1 AW261589|D3Ertd552e|hct-1 cytochrome P450, family 7, subfamily b, polypeptide 1 protein-coding unique_peak2_50_39_0.0687383646765438_5.35629727722563_0.325162986021101 chr7 19747037 19747898 + 0.325162986021101 NA intron (NM_008990, intron 1 of 8) intron (NM_008990, intron 1 of 8) 2106 NM_008990 19294 Mm.4341 NM_008990 ENSMUSG00000062300 Nectin2 AI325026|AI987993|Cd112|MPH|Pvr|Pvrl2|Pvs|nectin-2 nectin cell adhesion molecule 2 protein-coding common_peak1_46_42_-0.152603451400044_5.34996302900208_0.325162986021101 chr15 64222463 64223017 + 0.325162986021101 NA intron (NM_001276461, intron 3 of 28) PB1D11|SINE|Alu 89933 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-2 chr11 67921401 67922010 + 0.325162986021101 NA exon (NM_001291049, exon 1 of 15) exon (NM_001291049, exon 1 of 15) 448 NM_001291049 216835 Mm.158885 NM_173754 ENSMUSG00000020905 Usp43 - ubiquitin specific peptidase 43 protein-coding common_peak1_46_42_-0.152603451400044_5.34996302900208_0.325162986021101-3 chr8 106512847 106513631 + 0.325162986021101 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 2387 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-3 chr11 75651540 75651916 + 0.325162986021101 NA promoter-TSS (NM_001080774) promoter-TSS (NM_001080774) 219 NM_008659 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak1_50_39_0.0687383646765438_5.35629727722563_0.325162986021101 chr10 24592893 24593315 + 0.325162986021101 NA Intergenic Intergenic -2338 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_50_39_0.0687383646765438_5.35629727722563_0.325162986021101-4 chr9 43743799 43744437 + 0.325162986021101 NA promoter-TSS (NM_021424) promoter-TSS (NM_021424) -458 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding common_peak2_50_39_0.0687383646765438_5.35629727722563_0.325162986021101 chr10 77569836 77570298 + 0.325162986021101 NA Intergenic Intergenic -11588 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding common_peak2_46_42_-0.152603451400044_5.34996302900208_0.325162986021101-3 chr16 87783332 87784117 + 0.325162986021101 NA Intergenic Intergenic 84770 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_85_74_-0.0896311398596916_6.18400312056603_0.32516057065155-2 chr3 28805509 28806266 + 0.32516057065155 NA intron (NR_154889, intron 1 of 3) intron (NR_154889, intron 1 of 3) 379 NM_026517 68028 Mm.21724 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding common_peak2_84_74_-0.106385913978794_6.17562573350648_0.32516057065155-2 chr7 45153701 45154590 + 0.32516057065155 NA promoter-TSS (NM_001278207) promoter-TSS (NM_001278207) -158 NM_029406 68845 Mm.181689 NM_029406 ENSMUSG00000003423 Pih1d1 1110061L23Rik|4933413A04Rik|Nop17 PIH1 domain containing 1 protein-coding common_peak2_84_74_-0.106385913978794_6.17562573350648_0.32516057065155 chr11 3535743 3536296 + 0.32516057065155 NA intron (NM_001159284, intron 3 of 21) intron (NM_001159284, intron 3 of 21) 3273 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak2_89_70_0.054566048348657_6.17703014367901_0.32516057065155 chr18 32163021 32163564 + 0.32516057065155 NA 5' UTR (NM_011946, exon 1 of 17) 5' UTR (NM_011946, exon 1 of 17) 203 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak1_89_70_0.054566048348657_6.17703014367901_0.32516057065155 chr19 8871596 8872255 + 0.32516057065155 NA intron (NM_146093, intron 3 of 9) CpG-7330 377 NM_001362044 225896 Mm.27839 NM_146093 ENSMUSG00000071655 Ubxn1 2B28|4930455J02Rik|D19Ertd721e|T25529|mY33K UBX domain protein 1 protein-coding common_peak2_89_70_0.054566048348657_6.17703014367901_0.32516057065155-2 chr19 42128345 42129065 + 0.32516057065155 NA intron (NM_027106, intron 1 of 2) intron (NM_027106, intron 1 of 2) 288 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak1_89_70_0.054566048348657_6.17703014367901_0.32516057065155-3 chr9 57940200 57941193 + 0.32516057065155 NA intron (NM_011352, intron 1 of 13) CpG 561 NM_011352 20361 Mm.335187 NM_011352 ENSMUSG00000038264 Sema7a 2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A protein-coding common_peak1_84_74_-0.106385913978794_6.17562573350648_0.32516057065155 chr2 24918788 24919591 + 0.32516057065155 NA intron (NM_001012518, intron 1 of 26) CpG 420 NM_172545 77683 Mm.24176 NM_172545 ENSMUSG00000036893 Ehmt1 9230102N17Rik|D330003E03|Eu-HMTase1|GLP|GLP1|KMT1D|mKIAA1876 euchromatic histone methyltransferase 1 protein-coding common_peak1_89_70_0.054566048348657_6.17703014367901_0.32516057065155-2 chr5 122501408 122502214 + 0.32516057065155 NA non-coding (NR_027838, exon 1 of 21) non-coding (NR_027838, exon 1 of 21) 414 NM_001110140 11938 Mm.227583 NM_009722 ENSMUSG00000029467 Atp2a2 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|Serca2a|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding common_peak1_85_74_-0.0896311398596916_6.18400312056603_0.32516057065155 chr11 83302774 83303408 + 0.32516057065155 NA intron (NM_027915, intron 1 of 20) CpG 394 NM_001035854 71770 Mm.39053 NM_027915 ENSMUSG00000035152 Ap2b1 1300012O03Rik|AI788979|AP105B adaptor-related protein complex 2, beta 1 subunit protein-coding common_peak2_274_217_0.0361949161814019_7.78628178286763_0.325158480146382 chr18 34953740 34955953 + 0.325158480146382 NA promoter-TSS (NM_010481) promoter-TSS (NM_010481) -495 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak1_349_292_-0.0449089018422981_8.1723024035011_0.325158242643802 chr15 99723012 99725328 + 0.325158242643802 NA 3' UTR (NM_010271, exon 8 of 8) 3' UTR (NM_010271, exon 8 of 8) 304 NR_155353 102638434 Mm.364438 NR_155353 Gm16537 - predicted gene 16537 ncRNA common_peak2_195_166_-0.0644561082544861_7.35147623834681_0.325010799570772 chr8 70042008 70043547 + 0.325010799570772 NA promoter-TSS (NM_001167939) promoter-TSS (NM_001167939) -36 NM_027481 70616 Mm.17665 NM_027481 ENSMUSG00000011306 Sugp1 5730496N02Rik|Sf4 SURP and G patch domain containing 1 protein-coding common_peak1_203_160_0.0456396223028008_7.35373668926602_0.325010799570722 chr8 69790628 69792418 + 0.325010799570722 NA exon (NM_133224, exon 1 of 26) exon (NM_133224, exon 1 of 26) 360 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding common_peak1_86_75_-0.0921788898388645_6.20183806852415_0.324829931509269 chr6 125191862 125192679 + 0.324829931509269 NA promoter-TSS (NM_025595) promoter-TSS (NM_025595) 70 NM_025595 66493 Mm.138749 NM_025595 ENSMUSG00000030335 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 protein-coding common_peak1_91_71_0.0658733207806987_6.20286166183266_0.324829931509269 chr3 60501240 60502042 + 0.324829931509269 NA intron (NM_001253711, intron 1 of 7) CpG 462 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_91_71_0.0658733207806987_6.20286166183266_0.324829931509269-2 chr4 43631106 43632430 + 0.324829931509269 NA promoter-TSS (NM_001355466) promoter-TSS (NM_001355466) -167 NM_001355466 230103 Mm.103477 NM_173788 ENSMUSG00000028469 Npr2 GC-B|GC-B2|GC-B3|cn|mNPR-B|pwe natriuretic peptide receptor 2 protein-coding common_peak2_91_71_0.0658733207806987_6.20286166183266_0.324829931509269 chr18 38418672 38419396 + 0.324829931509269 NA 5' UTR (NM_022996, exon 1 of 8) 5' UTR (NM_022996, exon 1 of 8) 127 NM_001355749 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak2_90_71_0.0502172430136865_6.19503362294916_0.324829931509269 chr3 37420006 37420826 + 0.324829931509269 NA promoter-TSS (NM_001291044) promoter-TSS (NM_001291044) 466 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak1_91_71_0.0658733207806987_6.20286166183266_0.324829931509269-2 chr7 73536830 73537715 + 0.324829931509269 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 4474 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_86_75_-0.0921788898388645_6.20183806852415_0.324829931509269 chr15 78983073 78983703 + 0.324829931509269 NA intron (NM_001024716, intron 1 of 13) intron (NM_001024716, intron 1 of 13) 332 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding common_peak1_90_71_0.0502172430136865_6.19503362294916_0.324829931509269 chr14 101653724 101654605 + 0.324829931509269 NA intron (NM_016723, intron 1 of 8) CpG 197 NM_016723 50933 Mm.275970 NM_016723 ENSMUSG00000022111 Uchl3 - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) protein-coding common_peak2_90_71_0.0502172430136865_6.19503362294916_0.324829931509269-2 chr4 148558181 148559078 + 0.324829931509269 NA promoter-TSS (NM_001355489) promoter-TSS (NM_001355489) -84 NM_001355489 50912 Mm.266635 NM_016699 ENSMUSG00000017264 Exosc10 PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4 exosome component 10 protein-coding common_peak2_86_75_-0.0921788898388645_6.20183806852415_0.324829931509269-2 chr8 107150295 107151215 + 0.324829931509269 NA promoter-TSS (NM_025558) promoter-TSS (NM_025558) 94 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak1_142_112_0.0474395908459453_6.84389875783816_0.32473791024256 chr8 108703678 108705122 + 0.32473791024256 NA Intergenic C-rich|Low_complexity|Low_complexity -10244 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_205_162_0.0418042312539058_7.36963026985803_0.324720090926104 chr5 96793377 96795580 + 0.324720090926104 NA intron (NM_013470, intron 1 of 12) intron (NM_013470, intron 1 of 12) 1093 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak1_198_168_-0.0598710839342322_7.37094389431507_0.324720090926054 chr10 93160873 93162645 + 0.324720090926054 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 883 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_48_43_-0.126073475271243_5.39639488100168_0.324581211600972-5 chr8 56931899 56932487 + 0.324581211600972 NA Intergenic Intergenic 381059 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-2 chr17 53689466 53690072 + 0.324581211600972 NA promoter-TSS (NM_028232) promoter-TSS (NM_028232) -454 NM_028232 72415 Mm.153202 NM_028232 ENSMUSG00000023940 Sgo1 3300001M08Rik|C81037|Sgol1 shugoshin 1 protein-coding common_peak2_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-5 chrX 36795704 36796220 + 0.324581211600972 NA intron (NM_007451, intron 1 of 3) CpG 365 NM_007451 11740 Mm.371544 NM_007451 ENSMUSG00000016319 Slc25a5 Ant2 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 protein-coding common_peak2_48_43_-0.126073475271243_5.39639488100168_0.324581211600972-4 chr6 128424631 128425114 + 0.324581211600972 NA promoter-TSS (NM_133927) promoter-TSS (NM_133927) 38 NM_133927 101142 Mm.31345 NM_133927 ENSMUSG00000001518 Itfg2 2700050P07Rik|AI646725 integrin alpha FG-GAP repeat containing 2 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972 chr11 53706546 53707058 + 0.324581211600972 NA intron (NM_009012, intron 1 of 24) CpG 517 NM_009012 19360 Mm.4888 NM_009012 ENSMUSG00000020380 Rad50 Mrell|Rad50l RAD50 double strand break repair protein protein-coding common_peak1_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-2 chr2 167932492 167932923 + 0.324581211600972 NA intron (NM_011201, intron 1 of 8) CpG 380 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-3 chr17 64192485 64192936 + 0.324581211600972 NA Intergenic Intergenic 139173 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja ring finger ubiquitin ligase 2 protein-coding common_peak1_48_43_-0.126073475271243_5.39639488100168_0.324581211600972 chr4 32180122 32180588 + 0.324581211600972 NA Intergenic Intergenic 216248 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-4 chr2 148158631 148159636 + 0.324581211600972 NA Intergenic Intergenic -112164 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding common_peak1_47_43_-0.155610951765292_5.38162614275465_0.324581211600972 chr13 36726629 36727157 + 0.324581211600972 NA intron (NM_153529, intron 2 of 2) intron (NM_153529, intron 2 of 2) 7584 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-4 chr4 108833814 108834569 + 0.324581211600972 NA promoter-TSS (NM_025334) promoter-TSS (NM_025334) 111 NM_001356361 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding unique_peak1_47_43_-0.155610951765292_5.38162614275465_0.324581211600972 chr3 97767452 97767946 + 0.324581211600972 NA non-coding (NR_110360, exon 1 of 17) non-coding (NR_110360, exon 1 of 17) 315 NM_178080 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding common_peak1_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-3 chr4 45503119 45503850 + 0.324581211600972 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 27344 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_51_40_0.0609311902637852_5.38801759974998_0.324581211600972 chr11 59655671 59656041 + 0.324581211600972 NA Intergenic Intergenic -6639 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_51_40_0.0609311902637852_5.38801759974998_0.324581211600972 chr11 76479027 76479730 + 0.324581211600972 NA intron (NM_001346670, intron 2 of 21) intron (NM_001346670, intron 2 of 21) -10913 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-3 chr17 78416188 78417070 + 0.324581211600972 NA intron (NM_001360407, intron 1 of 9) intron (NM_001360407, intron 1 of 9) 1523 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_48_43_-0.126073475271243_5.39639488100168_0.324581211600972-2 chr7 142471492 142472014 + 0.324581211600972 NA promoter-TSS (NM_019391) promoter-TSS (NM_019391) -90 NM_001271508 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-6 chr6 85432080 85432635 + 0.324581211600972 NA intron (NM_144918, intron 1 of 12) intron (NM_144918, intron 1 of 12) 381 NM_144918 232187 Mm.219946 NM_144918 ENSMUSG00000033706 Smyd5 AW536703|NN8-4AG|Rai15|Rrg1 SET and MYND domain containing 5 protein-coding common_peak1_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-2 chr15 53223643 53224064 + 0.324581211600972 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 122330 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_48_43_-0.126073475271243_5.39639488100168_0.324581211600972 chr17 33780793 33781485 + 0.324581211600972 NA exon (NM_020581, exon 1 of 7) exon (NM_020581, exon 1 of 7) 436 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak2_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-3 chr19 8798052 8798580 + 0.324581211600972 NA exon (NM_026329, exon 2 of 8) exon (NM_026329, exon 2 of 8) 241 NM_026329 67710 Mm.22117 NM_026329 ENSMUSG00000071662 Polr2g 2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l polymerase (RNA) II (DNA directed) polypeptide G protein-coding common_peak2_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-2 chr19 3685799 3686442 + 0.324581211600972 NA intron (NM_008513, intron 1 of 22) CpG 444 NM_008513 16973 Mm.274581 NM_008513 ENSMUSG00000024913 Lrp5 BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142 low density lipoprotein receptor-related protein 5 protein-coding common_peak2_51_40_0.0609311902637852_5.38801759974998_0.324581211600972-4 chr6 83017522 83018019 + 0.324581211600972 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 15701 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak2_48_43_-0.126073475271243_5.39639488100168_0.324581211600972-2 chr3 108571722 108572355 + 0.324581211600972 NA intron (NM_025444, intron 1 of 3) intron (NM_025444, intron 1 of 3) 339 NM_025444 99730 Mm.24431 NM_025444 ENSMUSG00000048100 Taf13 1810004N01Rik|2010309N11Rik|AI847295|TAFII18 TATA-box binding protein associated factor 13 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-7 chr7 74346313 74346931 + 0.324581211600972 NA intron (NM_001038643, intron 4 of 10) intron (NM_001038643, intron 4 of 10) 208158 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_48_43_-0.126073475271243_5.39639488100168_0.324581211600972-3 chr5 34535354 34535917 + 0.324581211600972 NA intron (NM_011893, intron 1 of 12) B1_Mus1|SINE|Alu -7730 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_47_43_-0.155610951765292_5.38162614275465_0.324581211600972-5 chr4 115737713 115738259 + 0.324581211600972 NA promoter-TSS (NM_172698) promoter-TSS (NM_172698) -87 NM_172698 230648 Mm.283565 NM_172698 ENSMUSG00000034210 Efcab14 4732418C07Rik EF-hand calcium binding domain 14 protein-coding common_peak1_144_113_0.0546249263931609_6.86020247736132_0.324532614707612 chr11 86593280 86594476 + 0.324532614707612 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -9720 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_143_113_0.0447112753614753_6.85524565184548_0.324532614707612-2 chr17 69228070 69229497 + 0.324532614707612 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 48423 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA common_peak2_143_113_0.0447112753614753_6.85524565184548_0.324532614707612 chr8 108703636 108705126 + 0.324532614707612 NA Intergenic C-rich|Low_complexity|Low_complexity -10263 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_144_113_0.0546249263931609_6.86020247736132_0.324532614707612-2 chr17 29094008 29095290 + 0.324532614707612 NA intron (NM_007669, intron 1 of 2) CpG 880 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak1_143_113_0.0447112753614753_6.85524565184548_0.324532614707612 chr17 53479283 53480162 + 0.324532614707612 NA intron (NM_025887, intron 1 of 5) CpG 488 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak1_92_72_0.0614605829002191_6.22055485033013_0.324508231870994 chr11 3408164 3409239 + 0.324508231870994 NA intron (NM_010718, intron 1 of 15) intron (NM_010718, intron 1 of 15) 537 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_92_72_0.0614605829002191_6.22055485033013_0.324508231870994 chr1 189727217 189727902 + 0.324508231870994 NA promoter-TSS (NM_008976) promoter-TSS (NM_008976) -709 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak2_92_72_0.0614605829002191_6.22055485033013_0.324508231870994-2 chr10 59615834 59616678 + 0.324508231870994 NA intron (NM_001033259, intron 1 of 7) CpG 436 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_208_164_0.0449216191053514_7.38878302379849_0.324436346500181 chr8 106210276 106211694 + 0.324436346500181 NA promoter-TSS (NM_001007567) promoter-TSS (NM_001007567) -52 NR_152744 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak2_580_460_0.0272497708892221_8.86224782587395_0.324379611318225 chr8 128684009 128687556 + 0.324379611318225 NA 5' UTR (NM_010578, exon 1 of 16) 5' UTR (NM_010578, exon 1 of 16) 128 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_145_114_0.0518704050483079_6.87142525346853_0.324330844378284 chr16 17200578 17201520 + 0.324330844378284 NA intron (NM_009456, intron 1 of 3) CpG 443 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak2_145_114_0.0518704050483079_6.87142525346853_0.324330844378284 chr1 6279956 6281151 + 0.324330844378284 NA Intergenic Intergenic 65891 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_93_73_0.0571529580998602_6.23802984467888_0.324195113983386 chr17 46890714 46891599 + 0.324195113983386 NA exon (NM_178385, exon 1 of 1) exon (NM_178385, exon 1 of 1) 535 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_88_77_-0.0970949924623214_6.23685472263109_0.324195113983386 chr18 56573045 56573778 + 0.324195113983386 NA promoter-TSS (NM_001127338) promoter-TSS (NM_001127338) -472 NM_001127338 110695 Mm.30250 NM_138600 ENSMUSG00000053644 Aldh7a1 Atq1|D18Wsu181e aldehyde dehydrogenase family 7, member A1 protein-coding common_peak1_93_73_0.0571529580998602_6.23802984467888_0.324195113983386-3 chr9 13827725 13828396 + 0.324195113983386 NA promoter-TSS (NM_001310721) promoter-TSS (NM_001310721) 344 NM_176836 72826 Mm.246174 NM_176836 ENSMUSG00000037808 Fam76b 2810485I05Rik|C78303 family with sequence similarity 76, member B protein-coding common_peak1_93_73_0.0571529580998602_6.23802984467888_0.324195113983386 chr15 90679048 90680093 + 0.324195113983386 NA promoter-TSS (NM_025815) promoter-TSS (NM_025815) -182 NM_001357979 66871 Mm.290991 NM_025815 ENSMUSG00000052560 Cpne8 1200003E11Rik|1500031E20Rik copine VIII protein-coding common_peak1_93_73_0.0571529580998602_6.23802984467888_0.324195113983386-2 chr4 155831345 155832347 + 0.324195113983386 NA intron (NM_025338, intron 1 of 3) CpG 577 NM_025338 66077 Mm.28999 NM_025338 ENSMUSG00000065990 Aurkaip1 0610033H09Rik|Aip|Akip|MRP-S38 aurora kinase A interacting protein 1 protein-coding common_peak1_146_115_0.0491577708926929_6.88255988057392_0.324132509221855-2 chr16 17529974 17531458 + 0.324132509221855 NA intron (NM_026909, intron 2 of 4) CpG 336 NM_026909 69009 Mm.10174 NM_026909 ENSMUSG00000022760 Thap7 1810004B07Rik THAP domain containing 7 protein-coding common_peak1_140_120_-0.0714213113183293_6.88315258161543_0.324132509221855 chr4 133671863 133673171 + 0.324132509221855 NA 5' UTR (NM_001145956, exon 1 of 3) 5' UTR (NM_001145956, exon 1 of 3) 130 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_146_115_0.0491577708926929_6.88255988057392_0.324132509221855 chr1 182367600 182369674 + 0.324132509221855 NA Intergenic Intergenic -27031 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_53_41_0.0802294281213989_5.43243213683946_0.3240268322889-4 chr7 127273491 127274014 + 0.3240268322889 NA exon (NM_009266, exon 1 of 1) exon (NM_009266, exon 1 of 1) 307 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding unique_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889 chr7 38270749 38271711 + 0.3240268322889 NA 5' UTR (NM_025390, exon 1 of 7) 5' UTR (NM_025390, exon 1 of 7) 118 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-5 chr4 59783282 59783820 + 0.3240268322889 NA intron (NM_001013577, intron 1 of 4) CpG 304 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding common_peak2_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-3 chr6 88465428 88466060 + 0.3240268322889 NA intron (NM_019685, intron 1 of 10) CpG 335 NM_019685 56505 Mm.42195 NM_019685 ENSMUSG00000030079 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 protein-coding common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889-4 chr11 86602032 86602677 + 0.3240268322889 NA intron (NM_001356531, intron 9 of 11) intron (NM_001356531, intron 9 of 11) -18196 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-4 chr2 94045037 94045526 + 0.3240268322889 NA intron (NM_019657, intron 8 of 10) intron (NM_019657, intron 8 of 10) -34551 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889 chr11 5835444 5836280 + 0.3240268322889 NA intron (NM_017401, intron 2 of 10) intron (NM_017401, intron 2 of 10) 2154 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-2 chr13 102646605 102647224 + 0.3240268322889 NA Intergenic Intergenic -46633 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding common_peak2_52_41_0.0534526324910995_5.41904373902431_0.3240268322889 chr12 69998882 69999309 + 0.3240268322889 NA Intergenic Intergenic -12093 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889-7 chr2 130283999 130284648 + 0.3240268322889 NA intron (NM_130884, intron 1 of 11) CpG-8539 128 NM_130884 170718 Mm.29590 NM_130884 ENSMUSG00000027406 Idh3b C78231 isocitrate dehydrogenase 3 (NAD+) beta protein-coding common_peak2_49_44_-0.129554234177366_5.42707597924099_0.3240268322889 chr3 41172325 41173001 + 0.3240268322889 NA Intergenic Intergenic -89617 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-8 chr7 12922548 12923092 + 0.3240268322889 NA intron (NM_009095, intron 1 of 5) intron (NM_009095, intron 1 of 5) 509 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-11 chr9 13826522 13826964 + 0.3240268322889 NA promoter-TSS (NM_001358259) promoter-TSS (NM_001358259) 310 NR_037622 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-7 chr6 88465418 88466063 + 0.3240268322889 NA intron (NM_019685, intron 1 of 10) CpG 331 NM_019685 56505 Mm.42195 NM_019685 ENSMUSG00000030079 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 protein-coding common_peak1_53_41_0.0802294281213989_5.43243213683946_0.3240268322889-2 chr17 66366131 66366753 + 0.3240268322889 NA exon (NM_001114098, exon 8 of 15) exon (NM_001114098, exon 8 of 15) 83308 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889-2 chr1 139422377 139422943 + 0.3240268322889 NA intron (NM_172643, intron 1 of 10) CpG 277 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889 chr1 64533405 64533921 + 0.3240268322889 NA intron (NM_001037726, intron 1 of 6) CpG 859 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-6 chr4 132352923 132353560 + 0.3240268322889 NA intron (NR_003270, intron 1 of 2) intron (NR_003270, intron 1 of 2) 445 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA common_peak2_53_41_0.0802294281213989_5.43243213683946_0.3240268322889-2 chr7 114254276 114254668 + 0.3240268322889 NA intron (NM_033370, intron 1 of 21) CpG 208 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889-5 chr17 5569238 5569655 + 0.3240268322889 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 76846 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak1_53_41_0.0802294281213989_5.43243213683946_0.3240268322889 chr11 69681368 69681874 + 0.3240268322889 NA TTS (NM_001034097) TTS (NM_001034097) 349 NM_030702 80886 Mm.284592 NM_030702 ENSMUSG00000005204 Senp3 AA408656|Smt3ip|Smt3ip1 SUMO/sentrin specific peptidase 3 protein-coding common_peak2_53_41_0.0802294281213989_5.43243213683946_0.3240268322889 chr3 104218944 104219839 + 0.3240268322889 NA intron (NM_133853, intron 1 of 21) intron (NM_133853, intron 1 of 21) 1015 NM_133853 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-9 chr7 46033806 46034423 + 0.3240268322889 NA intron (NM_153057, intron 1 of 30) intron (NM_153057, intron 1 of 30) 418 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-10 chr7 137437703 137438101 + 0.3240268322889 NA intron (NR_033611, intron 1 of 10) CpG 228 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 - glutaredoxin 3 pseudogene pseudo common_peak1_53_41_0.0802294281213989_5.43243213683946_0.3240268322889-3 chr5 31629562 31629840 + 0.3240268322889 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 15750 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-2 chr4 141559548 141559943 + 0.3240268322889 NA Intergenic Intergenic 13583 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889-3 chr11 84179901 84180484 + 0.3240268322889 NA Intergenic CpG -12716 NM_001037932 628813 Mm.390389 NM_001037932 ENSMUSG00000051452 Gm11437 AI463690 predicted gene 11437 protein-coding common_peak1_49_44_-0.129554234177366_5.42707597924099_0.3240268322889-3 chr15 95371035 95371801 + 0.3240268322889 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 156596 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding common_peak1_52_41_0.0534526324910995_5.41904373902431_0.3240268322889-6 chr17 63863232 63863788 + 0.3240268322889 NA promoter-TSS (NM_001037997) promoter-TSS (NM_001037997) -471 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak2_147_116_0.0464860623275491_6.89360775074718_0.323937522245888 chr15 75908789 75909555 + 0.323937522245888 NA promoter-TSS (NM_178646) promoter-TSS (NM_178646) 172 NM_001285433 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding common_peak2_141_121_-0.0731715754293987_6.89415154984819_0.323937522245888 chr2 126932106 126933536 + 0.323937522245888 NA intron (NM_023220, intron 1 of 14) G-rich|Low_complexity|Low_complexity 414 NM_023220 66552 Mm.269928 NM_023220 ENSMUSG00000027366 Sppl2a 2010106G01Rik|C130089K23Rik signal peptide peptidase like 2A protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-10 chr2 153346529 153346753 + 0.323898164595612 NA promoter-TSS (NR_040318) promoter-TSS (NR_040318) 502 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-10 chr17 87024681 87025103 + 0.323898164595612 NA promoter-TSS (NM_019936) promoter-TSS (NM_019936) 509 NM_008838 18701 Mm.219685 NM_008838 ENSMUSG00000024145 Pigf - phosphatidylinositol glycan anchor biosynthesis, class F protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-6 chr7 41599355 41599783 + 0.323898164595612 NA Intergenic Intergenic -33962 NM_001360675 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-8 chr16 55523380 55523761 + 0.323898164595612 NA Intergenic MamGypLTR3a|LTR|Gypsy 28839 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-16 chr5 72854440 72854727 + 0.323898164595612 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 13865 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612 chr1 40220127 40220456 + 0.323898164595612 NA Intergenic Intergenic -4789 NM_008362 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-13 chr4 41722783 41723118 + 0.323898164595612 NA TTS (NM_001252622) TTS (NM_001252622) 213 NM_001159565 53598 Mm.29025 NM_016890 ENSMUSG00000028447 Dctn3 p24 dynactin 3 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-14 chr9 21181806 21182072 + 0.323898164595612 NA intron (NM_183408, intron 1 of 14) intron (NM_183408, intron 1 of 14) -2162 NM_001310750 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-7 chr8 91312848 91313097 + 0.323898164595612 NA promoter-TSS (NM_011936) promoter-TSS (NM_011936) 250 NM_173431 244585 Mm.324592 NM_173431 ENSMUSG00000033282 Rpgrip1l 1700047E16Rik|4931437C01|Ftm|Nphp8 Rpgrip1-like protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-12 chr3 51564809 51565118 + 0.323898164595612 NA intron (NR_033624, intron 4 of 4) intron (NR_033624, intron 4 of 4) -4140 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding unique_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-3 chr19 53461587 53461974 + 0.323898164595612 NA intron (NR_028427, intron 2 of 9) intron (NR_028427, intron 2 of 9) 3016 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-5 chr11 54214064 54214422 + 0.323898164595612 NA promoter-TSS (NR_045506) promoter-TSS (NR_045506) -955 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-5 chr15 27322633 27322838 + 0.323898164595612 NA Intergenic Intergenic -143942 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-18 chr7 16210598 16210997 + 0.323898164595612 NA intron (NM_027883, intron 6 of 16) intron (NM_027883, intron 6 of 16) 11196 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-8 chr19 38610564 38610802 + 0.323898164595612 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 86486 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612 chr11 108425366 108425781 + 0.323898164595612 NA intron (NM_029606, intron 1 of 27) CpG 307 NM_029606 76380 Mm.344071 NM_029586 ENSMUSG00000020728 Cep112 1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco centrosomal protein 112 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-21 chr9 102635898 102636164 + 0.323898164595612 NA Intergenic Intergenic 9735 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-3 chr10 43751726 43751981 + 0.323898164595612 NA intron (NR_040581, intron 1 of 3) intron (NR_040581, intron 1 of 3) 5695 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-15 chr5 65437452 65438055 + 0.323898164595612 NA Intergenic Intergenic -1911 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-17 chr6 146934957 146935224 + 0.323898164595612 NA intron (NM_001355729, intron 2 of 27) intron (NM_001355729, intron 2 of 27) 19331 NM_028509 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-4 chr14 33357297 33357605 + 0.323898164595612 NA intron (NM_153800, intron 5 of 10) intron (NM_153800, intron 5 of 10) 53573 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-14 chr4 87984075 87984476 + 0.323898164595612 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 49132 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-7 chr13 102674454 102674743 + 0.323898164595612 NA Intergenic Intergenic -18949 NM_001360519 17079 Mm.373974 NM_008533 ENSMUSG00000021624 Cd180 F630107B15|Ly-78|Ly78|RP105 CD180 antigen protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-13 chr8 11331469 11331740 + 0.323898164595612 NA intron (NM_009932, intron 3 of 47) intron (NM_009932, intron 3 of 47) -18778 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-7 chr15 77908014 77908396 + 0.323898164595612 NA Intergenic Intergenic 20789 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-2 chr1 55130698 55131018 + 0.323898164595612 NA promoter-TSS (NM_025283) promoter-TSS (NM_025283) -387 NM_001310585 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-3 chr18 20745656 20746150 + 0.323898164595612 NA 5' UTR (NM_019737, exon 1 of 9) 5' UTR (NM_019737, exon 1 of 9) 501 NM_019737 56386 Mm.393827 NM_019737 ENSMUSG00000056124 B4galt6 AA536803|AU022389 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-11 chr4 59447632 59447970 + 0.323898164595612 NA Intergenic Intergenic -9168 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-2 chr12 77093254 77093481 + 0.323898164595612 NA Intergenic Intergenic -131119 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-2 chr16 29732594 29732960 + 0.323898164595612 NA Intergenic Intergenic 153443 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-6 chr11 109426024 109426272 + 0.323898164595612 NA promoter-TSS (NM_001252193) promoter-TSS (NM_001252193) -72 NM_001252193 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-4 chr19 36375103 36375591 + 0.323898164595612 NA Intergenic Intergenic -3720 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-6 chr15 66865960 66866246 + 0.323898164595612 NA Intergenic Intergenic -25290 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-12 chr5 24383959 24384270 + 0.323898164595612 NA TTS (NM_001002897) TTS (NM_001002897) 8029 NM_001002897 213948 Mm.332252 NM_001002897 ENSMUSG00000038295 Atg9b Apg912|Apg9l2|Apgdc2|Gm574|Nos3as|eONE|sONE autophagy related 9B protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-19 chr7 130288976 130289182 + 0.323898164595612 NA Intergenic Intergenic -22271 NM_201601 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-3 chr14 30561370 30561603 + 0.323898164595612 NA intron (NM_009388, intron 4 of 13) intron (NM_009388, intron 4 of 13) -10663 NR_037237 100526475 NR_037237 ENSMUSG00000093156 Mir3076 mir-3076|mmu-mir-3076 microRNA 3076 ncRNA common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-4 chr11 8658745 8659007 + 0.323898164595612 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 5659 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-20 chr9 4310089 4310312 + 0.323898164595612 NA promoter-TSS (NM_026276) promoter-TSS (NM_026276) 384 NM_026962 69149 Mm.25946 NM_026962 ENSMUSG00000025893 Kbtbd3 2200003A07Rik|Bklhd3 kelch repeat and BTB (POZ) domain containing 3 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612 chr1 89122693 89123024 + 0.323898164595612 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 52443 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-9 chr2 24962543 24962857 + 0.323898164595612 NA 5' UTR (NM_001355556, exon 1 of 9) 5' UTR (NM_001355556, exon 1 of 9) 278 NM_026044 67228 Mm.389248 NM_026044 ENSMUSG00000026975 Dph7 2810443J12Rik|AW060693|Wdr85 diphthamine biosynethesis 7 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-11 chr19 44753638 44754079 + 0.323898164595612 NA Intergenic Intergenic -3536 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding unique_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-2 chr17 87350150 87350548 + 0.323898164595612 NA intron (NM_028639, intron 15 of 19) intron (NM_028639, intron 15 of 19) 67463 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding unique_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-5 chr5 115850768 115851211 + 0.323898164595612 NA intron (NM_007708, intron 1 of 46) intron (NM_007708, intron 1 of 46) 5333 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding unique_peak1_21_20_-0.206087040608456_4.28927390247453_0.323898164595612 chr1 161621663 161621945 + 0.323898164595612 NA Intergenic Intergenic 127147 NM_183391 240873 Mm.276823 NM_183391 ENSMUSG00000066755 Tnfsf18 Gitrl|Tnlg2a tumor necrosis factor (ligand) superfamily, member 18 protein-coding common_peak2_21_20_-0.206087040608456_4.28927390247453_0.323898164595612-9 chr16 96128018 96128408 + 0.323898164595612 NA promoter-TSS (NM_008251) promoter-TSS (NM_008251) -488 NM_008251 15312 Mm.2756 NM_008251 ENSMUSG00000040681 Hmgn1 HMG-14|Hmg14 high mobility group nucleosomal binding domain 1 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-10 chr4 11918148 11918525 + 0.323898164595606 NA Intergenic Intergenic 47377 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-6 chr17 28144374 28144852 + 0.323898164595606 NA intron (NM_001004366, intron 1 of 21) intron (NM_001004366, intron 1 of 21) 2087 NM_001004366 268935 Mm.258491 NM_001004366 ENSMUSG00000038677 Scube3 CEGF3|D030038I21Rik signal peptide, CUB domain, EGF-like 3 protein-coding unique_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-5 chr8 128490254 128490549 + 0.323898164595606 NA intron (NM_001358959, intron 12 of 16) intron (NM_001358959, intron 12 of 16) 131160 NR_035436 100316680 NR_035436 ENSMUSG00000084523 Mir1903 Mirn1903|mmu-mir-1903 microRNA 1903 ncRNA common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-9 chr3 107757205 107757485 + 0.323898164595606 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 3124 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-13 chr5 65107719 65107983 + 0.323898164595606 NA 5' UTR (NM_001347355, exon 1 of 11) 5' UTR (NM_001347355, exon 1 of 11) 283 NM_001347355 71778 Mm.10281 NM_175174 ENSMUSG00000054920 Klhl5 1300013C10Rik kelch-like 5 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606 chr1 150097554 150098344 + 0.323898164595606 NA intron (NR_015466, intron 1 of 4) intron (NR_015466, intron 1 of 4) 1925 NR_015466 320019 Mm.353072 NR_015466 ENSMUSG00000097028 Ptgs2os 7530420F21Rik prostaglandin-endoperoxide synthase 2, opposite strand ncRNA common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-9 chr19 40492268 40492576 + 0.323898164595606 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 21314 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-10 chr3 75955402 75955838 + 0.323898164595606 NA intron (NM_001291069, intron 1 of 15) intron (NM_001291069, intron 1 of 15) 1329 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding unique_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-4 chr4 133184834 133185281 + 0.323898164595606 NA exon (NM_153423, exon 3 of 9) exon (NM_153423, exon 3 of 9) -10598 NR_105984 102466215 NR_105984 ENSMUSG00000099202 Mir7017 Gm27945|mmu-mir-7017 microRNA 7017 ncRNA common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-8 chr2 156737256 156737606 + 0.323898164595606 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 16152 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding unique_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-2 chr17 67277108 67277441 + 0.323898164595606 NA intron (NM_001357625, intron 1 of 32) intron (NM_001357625, intron 1 of 32) 77185 NM_008984 19274 Mm.311809 NM_008984 ENSMUSG00000033278 Ptprm RPTPmu|mKIAA4044 protein tyrosine phosphatase, receptor type, M protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-7 chr17 35919721 35920211 + 0.323898164595606 NA intron (NM_001357740, intron 1 of 18) intron (NM_001357740, intron 1 of 18) 694 NM_001357740 52040 Mm.29385 NM_175934 ENSMUSG00000039220 Ppp1r10 2610025H06Rik|Cat53|D17Ertd808e|Fb19|Pnuts protein phosphatase 1, regulatory subunit 10 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-11 chr4 63118305 63118533 + 0.323898164595606 NA intron (NM_028326, intron 11 of 14) intron (NM_028326, intron 11 of 14) 35753 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding unique_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606 chr11 69039895 69040268 + 0.323898164595606 NA Intergenic CpG -5556 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-15 chr9 108223256 108223532 + 0.323898164595606 NA intron (NM_001276485, intron 1 of 2) intron (NM_001276485, intron 1 of 2) -33011 NM_007567 12217 Mm.20425 NM_007567 ENSMUSG00000032589 Bsn - bassoon protein-coding unique_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-3 chr3 81916996 81917318 + 0.323898164595606 NA Intergenic Intergenic -15444 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-11 chr3 89177659 89177864 + 0.323898164595606 NA TTS (NM_007712) TTS (NM_007712) 370 NM_011886 24045 Mm.257052 NM_011886 ENSMUSG00000028049 Scamp3 Sc3 secretory carrier membrane protein 3 protein-coding unique_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-2 chr14 24486773 24486980 + 0.323898164595606 NA exon (NM_001081247, exon 1 of 31) exon (NM_001081247, exon 1 of 31) 182 NM_001081247 218832 Mm.343610 NM_183157 ENSMUSG00000025280 Polr3a 9330175N20Rik|BC053071|RPC1|RPC155 polymerase (RNA) III (DNA directed) polypeptide A protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-8 chr19 7381989 7382193 + 0.323898164595606 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -912 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA unique_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-5 chr6 86732838 86733200 + 0.323898164595606 NA exon (NM_011818, exon 1 of 14) exon (NM_011818, exon 1 of 14) 359 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-3 chr11 117828904 117829364 + 0.323898164595606 NA intron (NM_027827, intron 2 of 10) intron (NM_027827, intron 2 of 10) -3120 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-14 chr6 84271474 84271895 + 0.323898164595606 NA Intergenic Intergenic 152154 NR_046063 100038556 Mm.387783 NR_046063 ENSMUSG00000107797 Gm10445 - predicted gene 10445 ncRNA common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-2 chr1 193386902 193387207 + 0.323898164595606 NA Intergenic Intergenic -16772 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-5 chr13 60661187 60661437 + 0.323898164595606 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 59101 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-3 chr4 59332071 59332310 + 0.323898164595606 NA intron (NM_001163288, intron 13 of 16) intron (NM_001163288, intron 13 of 16) 72139 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-5 chr16 96089009 96089511 + 0.323898164595606 NA Intergenic Intergenic -6832 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-2 chr1 172311244 172311591 + 0.323898164595606 NA promoter-TSS (NM_080419) promoter-TSS (NM_080419) -950 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606 chr1 131378500 131378927 + 0.323898164595606 NA intron (NM_001081011, intron 4 of 22) intron (NM_001081011, intron 4 of 22) -99150 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-E|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-6 chr15 7860165 7860415 + 0.323898164595606 NA Intergenic Intergenic 44740 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-12 chr4 116557826 116558176 + 0.323898164595606 NA intron (NM_029868, intron 1 of 11) CpG 274 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding unique_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-6 chr8 120498616 120498908 + 0.323898164595606 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 9896 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-3 chr10 119240301 119240554 + 0.323898164595606 NA promoter-TSS (NM_027994) promoter-TSS (NM_027994) -372 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-14 chr4 133378638 133378911 + 0.323898164595606 NA intron (NM_016981, intron 1 of 11) intron (NM_016981, intron 1 of 11) 8998 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-4 chr13 56522524 56522886 + 0.323898164595606 NA intron (NM_178674, intron 1 of 6) CpG 233 NM_001359807 213311 Mm.233904 NM_178674 ENSMUSG00000035509 Fbxl21 D630045D17Rik|FBL3B|FBXL3B|Psttm F-box and leucine-rich repeat protein 21 protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-12 chr3 138443234 138443471 + 0.323898164595606 NA intron (NM_007410, intron 1 of 8) CpG 259 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding unique_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606 chr10 128804971 128805287 + 0.323898164595606 NA promoter-TSS (NM_001359824) promoter-TSS (NM_001359824) -425 NM_001359825 74330 Mm.296915 NM_028873 ENSMUSG00000025354 Dnajc14 5730551F12Rik|DNAJ|DRIP78|HDJ3|LIP6 DnaJ heat shock protein family (Hsp40) member C14 protein-coding unique_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-4 chr4 136179848 136180383 + 0.323898164595606 NA promoter-TSS (NM_001305399) promoter-TSS (NM_001305399) -667 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-7 chr2 59203234 59203624 + 0.323898164595606 NA intron (NM_175464, intron 1 of 20) intron (NM_175464, intron 1 of 20) 42579 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-13 chr4 48540015 48540268 + 0.323898164595606 NA promoter-TSS (NM_001145924) promoter-TSS (NM_001145924) 60 NM_001145924 66665 Mm.140749 NM_028137 ENSMUSG00000039693 Msantd3 2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3 Myb/SANT-like DNA-binding domain containing 3 protein-coding common_peak1_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-15 chr8 84186858 84187229 + 0.323898164595606 NA Intergenic Intergenic -8082 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak2_23_18_0.0629481330016644_4.27940157994442_0.323898164595606-4 chr11 60933970 60934194 + 0.323898164595606 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 2025 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_89_78_-0.0994675803237639_6.25404695801522_0.323890238933426 chr11 54866536 54867077 + 0.323890238933426 NA intron (NM_008248, intron 1 of 2) CpG 423 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak2_89_78_-0.0994675803237639_6.25404695801522_0.323890238933426-3 chr8 125254123 125254917 + 0.323890238933426 NA intron (NM_174854, intron 12 of 12) intron (NM_174854, intron 12 of 12) 200325 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak2_89_78_-0.0994675803237639_6.25404695801522_0.323890238933426 chr4 43957573 43958893 + 0.323890238933426 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 531 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak2_89_78_-0.0994675803237639_6.25404695801522_0.323890238933426-2 chr6 114887974 114888915 + 0.323890238933426 NA intron (NM_001356371, intron 3 of 5) ID_B1|SINE|B4 33377 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_94_74_0.0529466832299006_6.25529203211083_0.323890238933426 chr9 82975125 82976017 + 0.323890238933426 NA promoter-TSS (NM_001081216) promoter-TSS (NM_001081216) -82 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak2_142_122_-0.0748959520781067_6.90506652930019_0.323745799370708 chr13 100729544 100730874 + 0.323745799370708 NA intron (NM_009874, intron 2 of 11) B1F2|SINE|Alu 733 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding common_peak2_148_117_0.0438543471634247_6.90457022294355_0.323745799370708 chr3 27652999 27654451 + 0.323745799370708 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 56727 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_149_117_0.0534364354446772_6.90936126708418_0.323745799370708 chr4 119538651 119540402 + 0.323745799370708 NA promoter-TSS (NM_172699) promoter-TSS (NM_172699) -135 NM_001290696 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding common_peak1_142_122_-0.0748959520781067_6.90506652930019_0.323745799370708 chr8 70609662 70610511 + 0.323745799370708 NA Intergenic Intergenic -1772 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak2_142_122_-0.0748959520781067_6.90506652930019_0.323745799370708-2 chr15 101369368 101370389 + 0.323745799370708 NA TTS (NR_035462) TTS (NR_035462) 247 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_382_303_0.0309928361727518_8.26342393152996_0.323664876216207 chr7 66386996 66389276 + 0.323664876216207 NA intron (NM_146191, intron 1 of 33) CpG 205 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding common_peak1_96_75_0.0636830409674927_6.27976903392733_0.323593285424106 chr7 49094082 49095057 + 0.323593285424106 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 67589 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak1_91_79_-0.0861297726643517_6.27886320855519_0.323593285424106 chr6 114887979 114888968 + 0.323593285424106 NA intron (NM_001356371, intron 3 of 5) intron (NM_001356371, intron 3 of 5) 33348 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_90_79_-0.101785850431364_6.27103516967168_0.323593285424106 chr7 28944901 28946474 + 0.323593285424106 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 16645 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_96_75_0.0636830409674927_6.27976903392733_0.323593285424106 chr9 102736575 102737909 + 0.323593285424106 NA Intergenic Intergenic -2406 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_90_79_-0.101785850431364_6.27103516967168_0.323593285424106-3 chr8 78820421 78821570 + 0.323593285424106 NA intron (NM_001191004, intron 1 of 4) CpG 157 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_95_75_0.0488381738551773_6.27234660037117_0.323593285424106 chr1 132337076 132338206 + 0.323593285424106 NA Intergenic Intergenic 21516 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_95_75_0.0488381738551773_6.27234660037117_0.323593285424106 chr17 45747950 45749082 + 0.323593285424106 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 14010 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_95_75_0.0488381738551773_6.27234660037117_0.323593285424106-2 chr1 181742937 181743933 + 0.323593285424106 NA Intergenic Intergenic 98966 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_90_79_-0.101785850431364_6.27103516967168_0.323593285424106 chr4 126428910 126430200 + 0.323593285424106 NA promoter-TSS (NM_153402) promoter-TSS (NM_153402) -13 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding common_peak1_90_79_-0.101785850431364_6.27103516967168_0.323593285424106-2 chr8 13338953 13339599 + 0.323593285424106 NA intron (NM_001358991, intron 1 of 12) CpG 472 NM_009361 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding common_peak1_150_118_0.0507801409490956_6.92020783378249_0.323557259308907 chr18 75365994 75367127 + 0.323557259308907 NA promoter-TSS (NM_001042660) promoter-TSS (NM_001042660) 528 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak2_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-2 chr16 45382782 45383443 + 0.323497957212832 NA 3' UTR (NM_010818, exon 6 of 6) 3' UTR (NM_010818, exon 6 of 6) 25941 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_54_42_0.0725675466488411_5.46254852802652_0.323497957212832 chr3 107757692 107758167 + 0.323497957212832 NA intron (NM_007778, intron 1 of 8) intron (NM_007778, intron 1 of 8) 2540 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-3 chr16 45951720 45952525 + 0.323497957212832 NA intron (NR_152227, intron 2 of 2) intron (NR_152227, intron 2 of 2) 6516 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak2_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-3 chr2 35661460 35662092 + 0.323497957212832 NA intron (NM_001290637, intron 3 of 16) CpG-8041 -30218 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-3 chr7 66060403 66061029 + 0.323497957212832 NA intron (NR_152094, intron 1 of 7) CpG 380 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-3 chr7 133637708 133638212 + 0.323497957212832 NA intron (NM_178115, intron 1 of 24) CpG 285 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak2_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-4 chr2 25271712 25272337 + 0.323497957212832 NA promoter-TSS (NM_175300) promoter-TSS (NM_175300) 394 NM_023464 68475 Mm.21444 NM_023464 ENSMUSG00000026966 Ssna1 1110003H09Rik|1190004J23Rik|AA934184|N14|NA14 SS nuclear autoantigen 1 protein-coding common_peak1_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-4 chrX 74270902 74271647 + 0.323497957212832 NA intron (NM_052835, intron 2 of 6) intron (NM_052835, intron 2 of 6) 458 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding common_peak2_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-5 chr9 56927635 56928749 + 0.323497957212832 NA 5' UTR (NM_175483, exon 1 of 2) 5' UTR (NM_175483, exon 1 of 2) 179 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding common_peak2_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-6 chr9 122293797 122294351 + 0.323497957212832 NA intron (NM_001271873, intron 1 of 12) CpG 349 NM_001271873 102566 Mm.87676 NM_133979 ENSMUSG00000037949 Ano10 AI604832|Tmem16k anoctamin 10 protein-coding common_peak1_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-4 chr8 126807603 126808391 + 0.323497957212832 NA Intergenic Intergenic -41023 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-2 chr7 99131245 99131959 + 0.323497957212832 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 9542 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak2_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-4 chr7 127375532 127375974 + 0.323497957212832 NA exon (NM_175560, exon 1 of 3) exon (NM_175560, exon 1 of 3) 297 NM_175560 269997 Mm.221270 NM_175560 ENSMUSG00000054381 Zfp747 6430604K15Rik zinc finger protein 747 protein-coding common_peak1_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-2 chr2 91650243 91650873 + 0.323497957212832 NA promoter-TSS (NM_001033451) promoter-TSS (NM_001033451) 440 NR_027371 228359 Mm.22413 NM_146124 ENSMUSG00000027247 Arhgap1 B230365D05Rik|C76222|Cdc42GAP|p50rhoGAP Rho GTPase activating protein 1 protein-coding common_peak1_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-6 chr9 43262317 43263254 + 0.323497957212832 NA intron (NM_001243261, intron 1 of 2) intron (NM_001243261, intron 1 of 2) 2906 NM_001243261 235302 Mm.135745 NM_001243261 D630033O11Rik Gm588 RIKEN cDNA D630033O11 gene protein-coding common_peak2_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-2 chr12 59218546 59219210 + 0.323497957212832 NA exon (NM_001033156, exon 1 of 4) exon (NM_001033156, exon 1 of 4) 605 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak2_54_42_0.0725675466488411_5.46254852802652_0.323497957212832 chr1 86110031 86110698 + 0.323497957212832 NA intron (NM_008311, intron 2 of 3) intron (NM_008311, intron 2 of 3) 1606 NM_008311 15559 Mm.439747 NM_008311 ENSMUSG00000026228 Htr2b 5-HT2B|AJ012488|AV377389 5-hydroxytryptamine (serotonin) receptor 2B protein-coding common_peak1_50_45_-0.132895496493107_5.45711420781046_0.323497957212832 chr18 77880082 77880959 + 0.323497957212832 NA intron (NM_013831, intron 14 of 14) intron (NM_013831, intron 14 of 14) -57947 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_50_45_-0.132895496493107_5.45711420781046_0.323497957212832 chr11 3437913 3438511 + 0.323497957212832 NA exon (NM_145355, exon 2 of 8) exon (NM_145355, exon 2 of 8) -14225 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA common_peak2_50_45_-0.132895496493107_5.45711420781046_0.323497957212832-5 chr9 110849602 110850292 + 0.323497957212832 NA intron (NM_183103, intron 2 of 4) intron (NM_183103, intron 2 of 4) 5441 NM_183103 74306 Mm.87419 NM_183103 ENSMUSG00000049719 Prss46 1700112C13Rik|79H19B|Tessp6 protease, serine 46 protein-coding common_peak1_54_42_0.0725675466488411_5.46254852802652_0.323497957212832-5 chr9 41584817 41585362 + 0.323497957212832 NA intron (NR_015483, intron 1 of 1) intron (NR_015483, intron 1 of 1) 3163 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak1_151_119_0.0481628997901398_6.93097204550359_0.32337182344987 chr3 41317955 41320283 + 0.32337182344987 NA Intergenic (TCTG)n|Simple_repeat|Simple_repeat 174080 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak1_151_119_0.0481628997901398_6.93097204550359_0.32337182344987-2 chr9 70207424 70208776 + 0.32337182344987 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 750 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_210_178_-0.05892882310562_7.45435136571145_0.323366234542318 chr19 5490568 5491996 + 0.323366234542318 NA intron (NM_007687, intron 1 of 3) CpG 827 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding common_peak2_92_80_-0.0885648611043877_6.29556757233243_0.323303948644615 chr2 75703641 75704471 + 0.323303948644615 NA intron (NR_132727, intron 1 of 1) CpG 607 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_97_76_0.0595166230979096_6.29654485224386_0.323303948644615 chr15 102102022 102102807 + 0.323303948644615 NA promoter-TSS (NM_153533) promoter-TSS (NM_153533) -520 NM_001355636 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_97_76_0.0595166230979096_6.29654485224386_0.323303948644615 chr8 11259301 11259893 + 0.323303948644615 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -53208 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_92_80_-0.0885648611043877_6.29556757233243_0.323303948644615 chr15 38922629 38923123 + 0.323303948644615 NA Intergenic Intergenic -11033 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_97_76_0.0595166230979096_6.29654485224386_0.323303948644615-2 chr4 148523918 148524584 + 0.323303948644615 NA intron (NM_020009, intron 31 of 57) intron (NM_020009, intron 31 of 57) -23789 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak2_92_80_-0.0885648611043877_6.29556757233243_0.323303948644615-2 chr5 36397414 36398144 + 0.323303948644615 NA exon (NM_030889, exon 1 of 27) exon (NM_030889, exon 1 of 27) 360 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak2_146_125_-0.070141157479652_6.94220934476009_0.323189415750898 chr1 74294885 74296838 + 0.323189415750898 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 8475 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_98_77_0.05544438818972_6.31312441295711_0.323021939226005 chr11 68312746 68313843 + 0.323021939226005 NA intron (NM_008744, intron 2 of 6) intron (NM_008744, intron 2 of 6) 73532 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding common_peak2_93_81_-0.0909456808892735_6.31207916417345_0.323021939226005-2 chr19 6127577 6128222 + 0.323021939226005 NA intron (NM_026912, intron 1 of 7) intron (NM_026912, intron 1 of 7) 316 NM_026912 69024 Mm.329629 NM_026912 ENSMUSG00000024787 Snx15 1500032B08Rik|E130013C21Rik sorting nexin 15 protein-coding common_peak1_98_77_0.05544438818972_6.31312441295711_0.323021939226005-2 chr11 102880379 102881539 + 0.323021939226005 NA promoter-TSS (NM_011431) promoter-TSS (NM_011431) 16 NM_011431 20624 Mm.873 NM_011431 ENSMUSG00000020929 Eftud2 116kDa|Snrp116|U5-116kD elongation factor Tu GTP binding domain containing 2 protein-coding common_peak1_93_81_-0.0909456808892735_6.31207916417345_0.323021939226005-2 chr2 157279063 157280001 + 0.323021939226005 NA promoter-TSS (NM_001039557) promoter-TSS (NM_001039557) 17 NM_001039557 629499 Mm.384235 NM_001039557 ENSMUSG00000074627 Mroh8 4922505G16Rik maestro heat-like repeat family member 8 protein-coding common_peak2_98_77_0.05544438818972_6.31312441295711_0.323021939226005 chr11 35979730 35980597 + 0.323021939226005 NA promoter-TSS (NM_170779) promoter-TSS (NM_170779) -74 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_93_81_-0.0909456808892735_6.31207916417345_0.323021939226005 chr10 117844736 117846001 + 0.323021939226005 NA intron (NM_024457, intron 1 of 7) GC_rich|Low_complexity|Low_complexity 606 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_98_77_0.05544438818972_6.31312441295711_0.323021939226005-3 chr17 44710152 44711483 + 0.323021939226005 NA intron (NM_001271627, intron 4 of 7) (CA)n|Simple_repeat|Simple_repeat 25359 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_93_81_-0.0909456808892735_6.31207916417345_0.323021939226005 chr11 95384688 95385407 + 0.323021939226005 NA exon (NM_016752, exon 1 of 9) exon (NM_016752, exon 1 of 9) 191 NM_001357797 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 UGTrel1|Ugalt2 solute carrier family 35, member B1 protein-coding common_peak2_98_77_0.05544438818972_6.31312441295711_0.323021939226005-2 chr14 103098714 103099549 + 0.323021939226005 NA promoter-TSS (NM_001347601) promoter-TSS (NM_001347601) -127 NM_001347601 50789 Mm.214746 NM_015822 ENSMUSG00000022124 Fbxl3 AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68 F-box and leucine-rich repeat protein 3 protein-coding common_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-4 chr8 45358245 45358792 + 0.322992865635707 NA intron (NM_153535, intron 1 of 13) CpG 23773 NM_153535 212326 Mm.51259 NM_153535 ENSMUSG00000070044 Fam149a AW213256|mKIAA4166 family with sequence similarity 149, member A protein-coding unique_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707 chr2 180946766 180947454 + 0.322992865635707 NA intron (NM_001141933, intron 1 of 5) intron (NM_001141933, intron 1 of 5) 7589 NM_001141933 58237 Mm.40361 NM_021426 ENSMUSG00000027574 Nkain4 AB030182|C030019F02Rik Na+/K+ transporting ATPase interacting 4 protein-coding common_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-5 chr8 119806669 119807293 + 0.322992865635707 NA Intergenic Intergenic -28565 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-2 chr4 155760516 155761092 + 0.322992865635707 NA promoter-TSS (NR_027971) promoter-TSS (NR_027971) 294 NM_179203 108888 Mm.241152 NM_179203 ENSMUSG00000029036 Atad3a 2400004H09Rik|Atad3|Tob3|mKIAA1273 ATPase family, AAA domain containing 3A protein-coding common_peak2_51_46_-0.136105656795769_5.48653602327975_0.322992865635707-2 chr19 6980668 6981170 + 0.322992865635707 NA promoter-TSS (NM_001360286) promoter-TSS (NM_001360286) -455 NM_001166368 14227 Mm.4234 NM_008020 ENSMUSG00000056629 Fkbp2 mFKBP13|mFKBP2 FK506 binding protein 2 protein-coding common_peak2_51_46_-0.136105656795769_5.48653602327975_0.322992865635707-4 chr7 127904081 127904680 + 0.322992865635707 NA intron (NM_009739, intron 1 of 11) intron (NM_009739, intron 1 of 11) 307 NM_009739 12041 Mm.425495 NM_009739 ENSMUSG00000030802 Bckdk AI327402 branched chain ketoacid dehydrogenase kinase protein-coding common_peak2_55_43_0.0652124955813829_5.49203786642799_0.322992865635707 chr1 185328840 185329330 + 0.322992865635707 NA exon (NM_198653, exon 1 of 23) exon (NM_198653, exon 1 of 23) 316 NM_198653 381314 Mm.275841 NM_198653 ENSMUSG00000026618 Iars2 2010002H18Rik|C79125 isoleucine-tRNA synthetase 2, mitochondrial protein-coding common_peak2_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-2 chr16 92684939 92685962 + 0.322992865635707 NA intron (NM_001111022, intron 4 of 6) intron (NM_001111022, intron 4 of 6) 11879 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_51_46_-0.136105656795769_5.48653602327975_0.322992865635707 chr6 87851265 87851762 + 0.322992865635707 NA promoter-TSS (NM_013493) promoter-TSS (NM_013493) -407 NM_001355195 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak2_51_46_-0.136105656795769_5.48653602327975_0.322992865635707-3 chr5 105777335 105778279 + 0.322992865635707 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 76997 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-4 chrX 71816409 71817113 + 0.322992865635707 NA promoter-TSS (NM_001290780) promoter-TSS (NM_001290780) 3 NM_001290780 67048 Mm.41102 NM_001081356 ENSMUSG00000073131 Vma21 2610030H06Rik|AI840175 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) protein-coding common_peak2_51_46_-0.136105656795769_5.48653602327975_0.322992865635707 chr11 98192490 98193191 + 0.322992865635707 NA promoter-TSS (NM_013634) promoter-TSS (NM_013634) 66 NM_013634 19014 Mm.12926 NM_013634 ENSMUSG00000018160 Med1 AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|TRIP-2|l11Jus15 mediator complex subunit 1 protein-coding common_peak2_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-3 chr18 50053459 50054017 + 0.322992865635707 NA promoter-TSS (NR_155293) promoter-TSS (NR_155293) -76 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707 chr13 68581328 68581935 + 0.322992865635707 NA promoter-TSS (NR_138477) promoter-TSS (NR_138477) 473 NM_001308475 210009 Mm.205514 NM_172480 ENSMUSG00000034617 Mtrr 4732420G08|MSR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding common_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-6 chr9 77910882 77911495 + 0.322992865635707 NA Intergenic Intergenic -6177 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak1_55_43_0.0652124955813829_5.49203786642799_0.322992865635707-3 chr7 25219028 25219715 + 0.322992865635707 NA intron (NM_207677, intron 1 of 4) CpG 488 NM_207677 67379 Mm.280594 NM_026117 ENSMUSG00000054499 Dedd2 2410050E11Rik|FLAME-3 death effector domain-containing DNA binding protein 2 protein-coding common_peak1_214_181_-0.0560051703818738_7.47979205500776_0.322989745121781 chr14 33319384 33321482 + 0.322989745121781 NA intron (NM_153800, intron 4 of 10) CpG 90591 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_149_127_-0.0639205151934812_6.96803974240326_0.322833392882746 chr15 27991900 27993853 + 0.322833392882746 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 32972 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_154_122_0.0405369533941764_6.96278298203633_0.322833392882746 chr11 51999656 52000718 + 0.322833392882746 NA intron (NM_009458, intron 1 of 5) CpG 279 NM_009458 22210 Mm.384918 NM_009458 ENSMUSG00000020390 Ube2b E2-14k|HR6B|Rad6b|mHR6B ubiquitin-conjugating enzyme E2B protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-4 chr12 71898655 71899204 + 0.322753776620787 NA intron (NM_026102, intron 2 of 25) intron (NM_026102, intron 2 of 25) 9386 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-15 chr8 122347950 122348418 + 0.322753776620787 NA Intergenic Intergenic 14644 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-4 chr11 95008651 95009042 + 0.322753776620787 NA Intergenic Intergenic -1033 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding unique_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-2 chr16 55527843 55528264 + 0.322753776620787 NA Intergenic Intergenic 33322 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-9 chr4 141565258 141565636 + 0.322753776620787 NA Intergenic Intergenic 19285 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-13 chr2 75938414 75938730 + 0.322753776620787 NA promoter-TSS (NM_028235) promoter-TSS (NM_028235) -110 NM_028235 72421 Mm.275109 NM_028235 ENSMUSG00000075273 Ttc30b 2510042P03Rik|Tcc30b tetratricopeptide repeat domain 30B protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-17 chr6 146911471 146911787 + 0.322753776620787 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 23135 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-5 chr11 59505101 59505478 + 0.322753776620787 NA promoter-TSS (NR_135273) promoter-TSS (NR_135273) -364 NR_135273 74476 Mm.440257 NR_015585 ENSMUSG00000072893 4933439C10Rik 2610028M21Rik RIKEN cDNA 4933439C10 gene ncRNA common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-8 chr15 99359582 99360108 + 0.322753776620787 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 10637 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787 chr11 20248923 20249294 + 0.322753776620787 NA intron (NM_172260, intron 1 of 6) CpG 316 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-6 chr7 78769029 78769300 + 0.322753776620787 NA Intergenic Intergenic 13925 NM_023331 67308 Mm.193181 NM_023331 ENSMUSG00000030612 Mrpl46 3110052F15Rik|C15orf4|C80107|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-13 chr4 115000131 115000397 + 0.322753776620787 NA 5' UTR (NM_009185, exon 1 of 17) 5' UTR (NM_009185, exon 1 of 17) 146 NM_001304555 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding unique_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-4 chr18 12168832 12169251 + 0.322753776620787 NA intron (NM_029623, intron 1 of 19) intron (NM_029623, intron 1 of 19) 311 NM_029623 76482 Mm.196596 NM_029623 ENSMUSG00000024410 3110002H16Rik 2400010D15Rik|Mic-1|Mic1|Rmc1|Wdr98 RIKEN cDNA 3110002H16 gene protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-5 chr13 58157752 58158096 + 0.322753776620787 NA intron (NM_198004, intron 1 of 4) intron (NM_198004, intron 1 of 4) 275 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-4 chr10 71344497 71344739 + 0.322753776620787 NA intron (NM_134007, intron 1 of 2) CpG 231 NM_134007 52637 Mm.254114 NM_134007 ENSMUSG00000037710 Cisd1 AU043990|AW743335|D10Ertd214e|Zcd1|mitoNEET CDGSH iron sulfur domain 1 protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-12 chr8 27087742 27088244 + 0.322753776620787 NA intron (NM_054044, intron 1 of 18) intron (NM_054044, intron 1 of 18) 2152 NM_054044 78560 Mm.87046 NM_054044 ENSMUSG00000031486 Adgra2 8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531 adhesion G protein-coupled receptor A2 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-19 chr5 140518048 140518566 + 0.322753776620787 NA intron (NM_021528, intron 1 of 1) ZP3AR|Satellite|Satellite 12698 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-17 chr18 71216966 71217365 + 0.322753776620787 NA Intergenic Intergenic 648873 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-2 chr18 84951738 84952012 + 0.322753776620787 NA promoter-TSS (NM_025969) promoter-TSS (NM_025969) -351 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik translocase of inner mitochondrial membrane 21 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-4 chr14 42130482 42130805 + 0.322753776620787 NA Intergenic Intergenic -35366 NR_073362 73553 Mm.243777 NM_028570 ENSMUSG00000090462 1700091H14Rik 100041930|Gm3578 RIKEN cDNA 1700091H14 gene ncRNA common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-4 chr12 27339762 27339985 + 0.322753776620787 NA 3' UTR (NM_009234, exon 1 of 1) 3' UTR (NM_009234, exon 1 of 1) 2845 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-18 chr8 61625538 61625836 + 0.322753776620787 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) -34518 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-6 chr14 8357178 8357454 + 0.322753776620787 NA intron (NM_146050, intron 5 of 9) intron (NM_146050, intron 5 of 9) -10124 NR_151471 102632156 NR_151471 2610318M16Rik - RIKEN cDNA 2610318M16 gene ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787 chr1 172309898 172310357 + 0.322753776620787 NA Intergenic Intergenic -2240 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-21 chr9 104002847 104003123 + 0.322753776620787 NA exon (NM_172460, exon 1 of 8) exon (NM_172460, exon 1 of 8) 441 NM_172460 74025 Mm.479273 NM_028721 ENSMUSG00000032558 Nphp3 3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy nephronophthisis 3 (adolescent) protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-7 chr2 160367422 160367690 + 0.322753776620787 NA promoter-TSS (NM_010658) promoter-TSS (NM_010658) -491 NM_010658 16658 Mm.330745 NM_010658 ENSMUSG00000074622 Mafb Kreisler|Krml|Krml1|kr v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-9 chr15 13209714 13210209 + 0.322753776620787 NA Intergenic MLT1A1|LTR|ERVL-MaLR -36286 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-20 chr9 50659074 50659382 + 0.322753776620787 NA exon (NM_145614, exon 1 of 14) exon (NM_145614, exon 1 of 14) 552 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-6 chr16 33062541 33062839 + 0.322753776620787 NA exon (NM_172823, exon 1 of 17) exon (NM_172823, exon 1 of 17) 169 NM_172823 239833 Mm.131951 NM_172823 ENSMUSG00000022802 Lmln 5330415H22Rik|AI465495 leishmanolysin-like (metallopeptidase M8 family) protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-9 chr18 9271415 9271734 + 0.322753776620787 NA Intergenic Intergenic 11235 NM_153086 225152 Mm.119273 NM_153086 ENSMUSG00000036855 Gjd4 9430022F06Rik|Cx39 gap junction protein, delta 4 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-2 chr10 18996666 18997181 + 0.322753776620787 NA Intergenic B1F2|SINE|Alu 15040 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-7 chr7 141437196 141437528 + 0.322753776620787 NA TTS (NM_001360523) TTS (NM_001360523) 512 NM_026646 68267 Mm.33729 NM_026646 ENSMUSG00000019082 Slc25a22 1300006L01Rik|AI060884|Gc1 solute carrier family 25 (mitochondrial carrier, glutamate), member 22 protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-11 chr7 114203175 114203628 + 0.322753776620787 NA Intergenic Intergenic 51279 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding unique_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-2 chr1 191623449 191623984 + 0.322753776620787 NA TTS (NM_001306203) TTS (NM_001306203) 48080 NM_001306204 77065 Mm.338175 NM_178632 ENSMUSG00000037461 Ints7 5930412E23Rik|int7 integrator complex subunit 7 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-18 chr8 46780787 46781021 + 0.322753776620787 NA intron (NR_152560, intron 1 of 7) intron (NR_152560, intron 1 of 7) 41159 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-8 chr19 28663505 28663812 + 0.322753776620787 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -14566 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-6 chr14 7873978 7874442 + 0.322753776620787 NA intron (NM_001081427, intron 4 of 45) intron (NM_001081427, intron 4 of 45) 56253 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-3 chr10 68165952 68166260 + 0.322753776620787 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 112620 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-6 chr16 34925131 34925531 + 0.322753776620787 NA intron (NM_139300, intron 16 of 31) intron (NM_139300, intron 16 of 31) 13998 NR_040536 76649 Mm.420532 NR_040536 ENSMUSG00000100593 1700119H24Rik - RIKEN cDNA 1700119H24 gene ncRNA common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-7 chr11 96767063 96767300 + 0.322753776620787 NA TTS (NM_001163389) TTS (NM_001163389) 10374 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-2 chr11 20934454 20934896 + 0.322753776620787 NA Intergenic Intergenic -103567 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-10 chr18 78072954 78073389 + 0.322753776620787 NA Intergenic Intergenic -15903 NM_001101038 620235 Mm.35607 NM_001101038 ENSMUSG00000091055 Siglec15 Cd33l3|EG620235|SIGLEC-I sialic acid binding Ig-like lectin 15 protein-coding unique_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-3 chr6 35426594 35426822 + 0.322753776620787 NA Intergenic Intergenic 95862 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-15 chr5 112294792 112295052 + 0.322753776620787 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 18231 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-16 chr5 125388589 125388913 + 0.322753776620787 NA intron (NM_019639, intron 1 of 1) PB1D9|SINE|Alu 1266 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-8 chr8 72319576 72319930 + 0.322753776620787 NA exon (NM_008452, exon 2 of 3) exon (NM_008452, exon 2 of 3) 691 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787 chr10 24587677 24587957 + 0.322753776620787 NA Intergenic Intergenic -7625 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-10 chr18 67312295 67312566 + 0.322753776620787 NA intron (NM_053261, intron 5 of 7) intron (NM_053261, intron 5 of 7) 23207 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-2 chr10 19192639 19192899 + 0.322753776620787 NA intron (NR_038021, intron 3 of 3) intron (NR_038021, intron 3 of 3) 25531 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-15 chr16 91597358 91597663 + 0.322753776620787 NA intron (NM_030018, intron 1 of 6) CpG 170 NM_030018 77975 Mm.290341 NM_030018 ENSMUSG00000022964 Tmem50b AU015466|AU019872|B230114J08Rik transmembrane protein 50B protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-3 chr11 107132404 107132829 + 0.322753776620787 NA promoter-TSS (NM_176850) promoter-TSS (NM_176850) -694 NM_001359590 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-2 chr10 37137261 37137552 + 0.322753776620787 NA intron (NM_008538, intron 1 of 1) intron (NM_008538, intron 1 of 1) 1520 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-8 chr7 24460712 24460994 + 0.322753776620787 NA Intergenic Intergenic -1630 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-8 chr15 3996234 3996563 + 0.322753776620787 NA promoter-TSS (NM_145930) promoter-TSS (NM_145930) 359 NR_045740 328489 Mm.447020 NR_045740 ENSMUSG00000097662 Gm2093 100039196|A630020A06 predicted gene 2093 ncRNA common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787 chr10 80578017 80578288 + 0.322753776620787 NA promoter-TSS (NM_078477) promoter-TSS (NM_078477) -856 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-11 chr19 56997101 56997470 + 0.322753776620787 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 11290 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-7 chr14 40966403 40966713 + 0.322753776620787 NA intron (NM_145928, intron 1 of 8) CpG 338 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-12 chr15 83409685 83410024 + 0.322753776620787 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 22996 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-2 chr13 32338830 32339176 + 0.322753776620787 NA promoter-TSS (NM_146041) promoter-TSS (NM_146041) -459 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-9 chr8 117290989 117291328 + 0.322753776620787 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 34139 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-4 chr14 69685832 69686138 + 0.322753776620787 NA intron (NM_033325, intron 10 of 13) intron (NM_033325, intron 10 of 13) -6263 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-13 chr3 60528016 60528273 + 0.322753776620787 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 26965 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding unique_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787 chr1 73932838 73933319 + 0.322753776620787 NA intron (NM_001289895, intron 22 of 32) intron (NM_001289895, intron 22 of 32) -68612 NR_045311 109198 Mm.359721 NR_045311 ENSMUSG00000100301 6030407O03Rik - RIKEN cDNA 6030407O03 gene ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-2 chr10 42276323 42276615 + 0.322753776620787 NA intron (NM_019740, intron 1 of 3) CpG-1005 273 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-22 chr9 72197567 72198227 + 0.322753776620787 NA Intergenic Intergenic -76991 NM_146224 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-7 chr19 29468613 29468855 + 0.322753776620787 NA intron (NM_021396, intron 5 of 5) intron (NM_021396, intron 5 of 5) 53253 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-10 chr2 101967606 101967908 + 0.322753776620787 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 81495 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787 chr1 74034429 74034914 + 0.322753776620787 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 89776 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-3 chr13 58157768 58158124 + 0.322753776620787 NA intron (NM_198004, intron 1 of 4) intron (NM_198004, intron 1 of 4) 297 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-16 chr16 92565622 92566185 + 0.322753776620787 NA Intergenic Intergenic 67756 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-13 chr9 96801404 96801673 + 0.322753776620787 NA Intergenic Intergenic 35976 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-18 chr19 41998811 41999117 + 0.322753776620787 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 17201 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding unique_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-3 chr14 55604172 55604521 + 0.322753776620787 NA promoter-TSS (NM_001159418) promoter-TSS (NM_001159418) -233 NM_001159418 16391 Mm.2032 NM_008394 ENSMUSG00000002325 Irf9 Irf-9|Isgf3g|p48 interferon regulatory factor 9 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-12 chr2 145675085 145675322 + 0.322753776620787 NA Intergenic CpG -25992 NR_033220 408057 Mm.486711 NR_033220 ENSMUSG00000087594 BC039771 - cDNA sequence BC039771 ncRNA unique_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-5 chr4 59450518 59450940 + 0.322753776620787 NA Intergenic Intergenic -12096 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-12 chr2 158625104 158625485 + 0.322753776620787 NA exon (NM_175419, exon 1 of 9) exon (NM_175419, exon 1 of 9) 381 NM_175419 109275 Mm.27747 NM_175419 ENSMUSG00000037761 Actr5 AA545173|B430109J19Rik ARP5 actin-related protein 5 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-5 chr13 5870399 5870843 + 0.322753776620787 NA TTS (NM_011803) TTS (NM_011803) 9132 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-5 chr13 104286374 104286782 + 0.322753776620787 NA Intergenic Intergenic -1257 NR_136938 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-2 chr7 120677781 120678077 + 0.322753776620787 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) 309 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 Mosmo Atthog modulator of smoothened protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-16 chr9 96478372 96478608 + 0.322753776620787 NA exon (NM_011279, exon 1 of 3) exon (NM_011279, exon 1 of 3) 185 NM_011279 19823 Mm.28235 NM_011279 ENSMUSG00000051234 Rnf7 Rbx2|SAG ring finger protein 7 protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-5 chr3 122082685 122083033 + 0.322753776620787 NA intron (NM_007378, intron 7 of 49) intron (NM_007378, intron 7 of 49) 38399 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-13 chr16 10545438 10545700 + 0.322753776620787 NA exon (NM_001204229, exon 1 of 23) exon (NM_001204229, exon 1 of 23) 230 NM_001204229 74374 Mm.159176 NM_177562 ENSMUSG00000068663 Clec16a 4932416N17Rik|curt|mKIAA0350 C-type lectin domain family 16, member A protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-14 chr3 102472072 102472391 + 0.322753776620787 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 2312 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-8 chr4 81672718 81673058 + 0.322753776620787 NA Intergenic Intergenic -185875 NR_030570 100124446 NR_030570 ENSMUSG00000077941 Mir466h Mirn466h microRNA 466h ncRNA common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-3 chr14 43247422 43247700 + 0.322753776620787 NA Intergenic Intergenic 100250 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-20 chr9 43230848 43231232 + 0.322753776620787 NA intron (NM_178644, intron 1 of 3) intron (NM_178644, intron 1 of 3) 8776 NM_178644 102644 Mm.246479 NM_178644 ENSMUSG00000032014 Oaf AL024221|D130038B21Rik|D9Ucla1 out at first homolog protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-9 chr17 88529664 88529903 + 0.322753776620787 NA promoter-TSS (NM_028658) promoter-TSS (NM_028658) -341 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-16 chr8 11779561 11779849 + 0.322753776620787 NA intron (NM_017402, intron 1 of 19) intron (NM_017402, intron 1 of 19) 21375 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-17 chr9 102671913 102672382 + 0.322753776620787 NA Intergenic Intergenic -45657 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-10 chr15 59725544 59725907 + 0.322753776620787 NA Intergenic Intergenic 69234 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787 chr13 110942308 110942628 + 0.322753776620787 NA Intergenic Intergenic -38622 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-3 chr10 86166823 86167258 + 0.322753776620787 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) 71186 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-4 chr11 97959244 97959452 + 0.322753776620787 NA intron (NM_001163608, intron 2 of 13) intron (NM_001163608, intron 2 of 13) 27098 NM_028199 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-14 chr5 92219407 92219658 + 0.322753776620787 NA Intergenic Intergenic -4124 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-14 chr16 90934289 90934697 + 0.322753776620787 NA intron (NM_026502, intron 1 of 6) CpG 356 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-2 chr11 70021003 70021360 + 0.322753776620787 NA intron (NM_007864, intron 1 of 19) intron (NM_007864, intron 1 of 19) 2576 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs large MAGUK scaffold protein 4 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-11 chr2 137419676 137420097 + 0.322753776620787 NA Intergenic Intergenic -303366 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-15 chr5 35672240 35672523 + 0.322753776620787 NA intron (NM_001042615, intron 1 of 6) intron (NM_001042615, intron 1 of 6) 7399 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787 chr1 71923145 71923603 + 0.322753776620787 NA Intergenic Intergenic 35262 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-7 chr14 30548005 30548299 + 0.322753776620787 NA promoter-TSS (NM_009388) promoter-TSS (NM_009388) -979 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-3 chr10 80147625 80148076 + 0.322753776620787 NA promoter-TSS (NM_021565) promoter-TSS (NM_021565) -422 NM_001305798 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding unique_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787 chr1 155041492 155041784 + 0.322753776620787 NA Intergenic Intergenic 41626 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-9 chr8 79097369 79097827 + 0.322753776620787 NA intron (NM_001294279, intron 5 of 14) B1_Mur2|SINE|Alu 69161 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak2_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-11 chr15 77858062 77858445 + 0.322753776620787 NA Intergenic Intergenic -16078 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-18 chr9 102769397 102769666 + 0.322753776620787 NA Intergenic Intergenic 29883 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-5 chr15 76351401 76351604 + 0.322753776620787 NA promoter-TSS (NM_025340) promoter-TSS (NM_025340) 208 NM_026859 68877 Mm.289680 NM_026859 ENSMUSG00000022553 Maf1 1110068E11Rik|AU042856 MAF1 homolog, negative regulator of RNA polymerase III protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-12 chr2 73312741 73312994 + 0.322753776620787 NA promoter-TSS (NM_025854) promoter-TSS (NM_025854) 215 NM_001355711 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding unique_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787 chr15 10815157 10815679 + 0.322753776620787 NA Intergenic Intergenic -13633 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-23 chr9 99164053 99164314 + 0.322753776620787 NA Intergenic Intergenic -23972 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-6 chr18 32444344 32444635 + 0.322753776620787 NA Intergenic Intergenic -66205 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-10 chr9 24773985 24774260 + 0.322753776620787 NA 5' UTR (NM_020496, exon 1 of 7) 5' UTR (NM_020496, exon 1 of 7) 181 NM_020496 57246 Mm.31452 NM_020496 ENSMUSG00000031965 Tbx20 9430010M06Rik|AL022859|Tbx12 T-box 20 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-7 chr17 78736916 78737169 + 0.322753776620787 NA promoter-TSS (NM_011500) promoter-TSS (NM_011500) -482 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding unique_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787 chr3 143193231 143193539 + 0.322753776620787 NA Intergenic Intergenic -49670 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-17 chr8 46617677 46617971 + 0.322753776620787 NA promoter-TSS (NR_151680) promoter-TSS (NR_151680) 533 NM_009810 12367 Mm.34405 NM_009810 ENSMUSG00000031628 Casp3 A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy caspase 3 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-19 chr9 26999080 26999452 + 0.322753776620787 NA promoter-TSS (NM_144543) promoter-TSS (NM_144543) 283 NM_025862 66948 Mm.289244 NM_025862 ENSMUSG00000031969 Acad8 2310016C19Rik|AI786953 acyl-Coenzyme A dehydrogenase family, member 8 protein-coding common_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787-10 chr5 137613120 137613444 + 0.322753776620787 NA intron (NM_027708, intron 9 of 9) intron (NM_027708, intron 9 of 9) -1878 NM_008788 18542 Mm.262345 NM_008788 ENSMUSG00000029718 Pcolce Astt-2|Astt2|P14|PCPE-1 procollagen C-endopeptidase enhancer protein protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-3 chr10 71344576 71344799 + 0.322753776620787 NA intron (NM_134007, intron 1 of 2) CpG 162 NM_134007 52637 Mm.254114 NM_134007 ENSMUSG00000037710 Cisd1 AU043990|AW743335|D10Ertd214e|Zcd1|mitoNEET CDGSH iron sulfur domain 1 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-21 chr9 61669130 61669539 + 0.322753776620787 NA Intergenic ID_B1|SINE|B4 245176 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-11 chr9 78633637 78633977 + 0.322753776620787 NA intron (NM_153098, intron 2 of 32) intron (NM_153098, intron 2 of 32) 18261 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding common_peak1_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-5 chr14 76555023 76555227 + 0.322753776620787 NA intron (NM_001360046, intron 2 of 3) intron (NM_001360046, intron 2 of 3) 1562 NR_153389 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-8 chr13 24937342 24937807 + 0.322753776620787 NA promoter-TSS (NM_172532) promoter-TSS (NM_172532) 87 NM_172532 214579 Mm.393311 NM_172532 ENSMUSG00000035936 Aldh5a1 6330403E24Rik|Ahd-1|Ahd1|D630032B01Rik|SSADH|Ssdh1 aldhehyde dehydrogenase family 5, subfamily A1 protein-coding common_peak2_25_19_0.10361007956775_4.37373313467124_0.322753776620787-9 chr2 30445145 30445401 + 0.322753776620787 NA intron (NM_138748, intron 9 of 9) intron (NM_138748, intron 9 of 9) 28926 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-11 chr19 7557665 7558054 + 0.322753776620787 NA intron (NM_001362425, intron 1 of 4) intron (NM_001362425, intron 1 of 4) 374 NM_001362425 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 AdPLA|C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-14 chr2 165760892 165761220 + 0.322753776620787 NA intron (NM_001271962, intron 10 of 15) intron (NM_001271962, intron 10 of 15) 97117 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_25_19_0.10361007956775_4.37373313467124_0.322753776620787-6 chr4 109420100 109420482 + 0.322753776620787 NA intron (NM_001145948, intron 2 of 17) intron (NM_001145948, intron 2 of 17) 4644 NM_001145948 230603 Mm.33091 NM_153392 ENSMUSG00000028555 Ttc39a 4922503N01Rik tetratricopeptide repeat domain 39A protein-coding unique_peak1_22_21_-0.209523337267798_4.3546699500034_0.322753776620787 chr16 31290466 31290880 + 0.322753776620787 NA Intergenic L2c|LINE|L2 -15396 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding common_peak2_24_19_0.0474257468381891_4.34564096830646_0.322753776620787-6 chr11 69382899 69383448 + 0.322753776620787 NA Intergenic Intergenic 12173 NM_001045525 327951 Mm.415669 NM_001045525 ENSMUSG00000044795 Cyb5d1 Gm740 cytochrome b5 domain containing 1 protein-coding common_peak1_94_82_-0.0932740576211435_6.32840240253635_0.322746982275293 chr15 65786758 65787614 + 0.322746982275293 NA 5' UTR (NM_001356582, exon 1 of 23) 5' UTR (NM_001356582, exon 1 of 23) 166 NM_001356582 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak2_99_78_0.0514631344019607_6.32951231537808_0.322746982275293 chr9 57521306 57522137 + 0.322746982275293 NA intron (NM_007747, intron 1 of 4) CpG 489 NM_007747 12858 Mm.273403 NM_007747 ENSMUSG00000000088 Cox5a AA959768|CcOX cytochrome c oxidase subunit Va protein-coding common_peak1_99_78_0.0514631344019607_6.32951231537808_0.322746982275293-2 chr11 75178102 75179280 + 0.322746982275293 NA exon (NM_027136, exon 1 of 2) exon (NM_027136, exon 1 of 2) 117 NM_027136 246257 Mm.41496 NM_027136 ENSMUSG00000038268 Ovca2 9030414M07Rik candidate tumor suppressor in ovarian cancer 2 protein-coding common_peak1_99_78_0.0514631344019607_6.32951231537808_0.322746982275293 chr10 108378893 108379876 + 0.322746982275293 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 47195 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_156_123_0.0472210006375313_6.97780681070564_0.322659637555749 chr2 4881494 4883156 + 0.322659637555749 NA intron (NM_175400, intron 1 of 8) CpG 761 NM_175400 109079 Mm.34329 NM_175400 ENSMUSG00000026662 Sephs1 1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding common_peak1_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-2 chr14 33359192 33359697 + 0.322509988237734 NA intron (NM_153800, intron 6 of 10) intron (NM_153800, intron 6 of 10) 51580 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak1_52_47_-0.139192445451296_5.51536627799551_0.322509988237734-3 chr16 14316778 14317312 + 0.322509988237734 NA intron (NM_025345, intron 1 of 4) intron (NM_025345, intron 1 of 4) 287 NM_025345 66086 Mm.42072 NM_025345 ENSMUSG00000022677 Fopnl 0610037P05Rik Fgfr1op N-terminal like protein-coding common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-4 chr3 88409806 88410314 + 0.322509988237734 NA TTS (NM_178696) TTS (NM_178696) 337 NM_001310605 67037 Mm.36715 NM_025928 ENSMUSG00000028066 Pmf1 2600009M07Rik|AL033286|AW060657 polyamine-modulated factor 1 protein-coding common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-7 chr8 11376316 11376706 + 0.322509988237734 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -63685 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-3 chr15 11833889 11834568 + 0.322509988237734 NA Intergenic Intergenic 71446 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_52_47_-0.139192445451296_5.51536627799551_0.322509988237734-2 chr15 58872736 58873118 + 0.322509988237734 NA exon (NM_026642, exon 1 of 1) exon (NM_026642, exon 1 of 1) 278 NM_026642 68260 Mm.278805 NM_026642 ENSMUSG00000037085 Trmt12 4632406N01Rik|AI449275|Tyw2 tRNA methyltranferase 12 protein-coding common_peak1_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-4 chr7 74464563 74465404 + 0.322509988237734 NA intron (NM_001038643, intron 2 of 10) intron (NM_001038643, intron 2 of 10) 89797 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_56_44_0.0581459604429266_5.52092607655114_0.322509988237734 chr13 65240947 65241472 + 0.322509988237734 NA Intergenic CpG -35493 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding common_peak1_53_47_-0.112415649820996_5.52875467581066_0.322509988237734 chr10 127030210 127030822 + 0.322509988237734 NA exon (NM_025537, exon 2 of 6) exon (NM_025537, exon 2 of 6) 298 NM_025537 66399 Mm.29900 NM_025537 ENSMUSG00000040521 Tsfm 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt Ts translation elongation factor, mitochondrial protein-coding common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-2 chr19 46305781 46306682 + 0.322509988237734 NA promoter-TSS (NR_152247) promoter-TSS (NR_152247) 301 NM_001177370 18034 Mm.102365 NM_019408 ENSMUSG00000025225 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 protein-coding common_peak2_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-3 chr6 87224790 87225357 + 0.322509988237734 NA intron (NM_054041, intron 12 of 17) intron (NM_054041, intron 12 of 17) 110702 NM_054041 69538 Mm.232525 NM_054041 ENSMUSG00000033420 Antxr1 2310008J16Rik|2810405N18Rik|Antrx1|Tem8 anthrax toxin receptor 1 protein-coding common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734 chr11 74898229 74898691 + 0.322509988237734 NA exon (NM_177325, exon 2 of 15) exon (NM_177325, exon 2 of 15) 380 NM_177325 104662 Mm.220843 NM_177325 ENSMUSG00000038335 Tsr1 AU040765|AW550801|mKIAA1401 TSR1 20S rRNA accumulation protein-coding common_peak2_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-4 chr8 122143476 122143965 + 0.322509988237734 NA Intergenic Intergenic -138421 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-5 chr16 44139895 44140487 + 0.322509988237734 NA promoter-TSS (NM_007508) promoter-TSS (NM_007508) 382 NM_028108 72117 Mm.278726 NM_028108 ENSMUSG00000022698 Naa50 2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-5 chr4 141538957 141539598 + 0.322509988237734 NA promoter-TSS (NM_019763) promoter-TSS (NM_019763) -680 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 spen family transcription repressor protein-coding common_peak1_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-6 chr17 88440785 88441664 + 0.322509988237734 NA intron (NM_001355742, intron 1 of 5) CpG 520 NM_001355742 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak1_56_44_0.0581459604429266_5.52092607655114_0.322509988237734 chr14 31336673 31337372 + 0.322509988237734 NA intron (NM_001360187, intron 1 of 20) CpG 384 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding common_peak2_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-2 chr15 97964266 97964832 + 0.322509988237734 NA intron (NM_201359, intron 1 of 7) intron (NM_201359, intron 1 of 7) 320 NM_001252153 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding common_peak1_56_44_0.0581459604429266_5.52092607655114_0.322509988237734-4 chr16 11012504 11013323 + 0.322509988237734 NA intron (NR_040518, intron 2 of 2) intron (NR_040518, intron 2 of 2) 4015 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-3 chr2 32174753 32175066 + 0.322509988237734 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 23761 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-6 chr5 37823634 37824430 + 0.322509988237734 NA exon (NM_010835, exon 1 of 2) exon (NM_010835, exon 1 of 2) 553 NM_010835 17701 Mm.256509 NM_010835 ENSMUSG00000048450 Msx1 AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh msh homeobox 1 protein-coding common_peak2_52_47_-0.139192445451296_5.51536627799551_0.322509988237734 chr1 156673338 156674224 + 0.322509988237734 NA intron (NM_023141, intron 1 of 5) intron (NM_023141, intron 1 of 5) 558 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak1_52_47_-0.139192445451296_5.51536627799551_0.322509988237734 chr10 71237436 71238035 + 0.322509988237734 NA intron (NM_009360, intron 1 of 6) CpG 309 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding common_peak1_52_47_-0.139192445451296_5.51536627799551_0.322509988237734-5 chr2 126707395 126707931 + 0.322509988237734 NA intron (NM_019729, intron 1 of 18) intron (NM_019729, intron 1 of 18) 335 NM_019729 84092 Mm.272629 NM_019729 ENSMUSG00000027363 Usp8 AI574262|AW557536|Ubpy|mKIAA0055 ubiquitin specific peptidase 8 protein-coding common_peak2_52_47_-0.139192445451296_5.51536627799551_0.322509988237734-2 chr13 36726637 36727259 + 0.322509988237734 NA intron (NM_153529, intron 2 of 2) intron (NM_153529, intron 2 of 2) 7529 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-3 chr4 64086534 64087583 + 0.322509988237734 NA Intergenic Intergenic -40043 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_52_47_-0.139192445451296_5.51536627799551_0.322509988237734-4 chr2 21205792 21206336 + 0.322509988237734 NA promoter-TSS (NM_027728) promoter-TSS (NM_027728) 340 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak1_53_47_-0.112415649820996_5.52875467581066_0.322509988237734-2 chr15 10689297 10690026 + 0.322509988237734 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 23879 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_151_129_-0.0673143176297959_6.98871065421356_0.322488629889589 chr18 68156360 68157555 + 0.322488629889589 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -70989 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_95_83_-0.0955517354799982_6.34454155503876_0.322478816481785 chr1 136695648 136696363 + 0.322478816481785 NA promoter-TSS (NR_037986) promoter-TSS (NR_037986) -206 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak1_96_83_-0.0807068683676828_6.35196398859492_0.322478816481785-2 chr7 44850026 44850955 + 0.322478816481785 NA TTS (NR_030488) TTS (NR_030488) 483 NM_001253920 67605 Mm.148007 NM_026270 ENSMUSG00000011096 Akt1s1 1110012J22Rik|AI227026|Lobe|Lobel|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding common_peak1_96_83_-0.0807068683676828_6.35196398859492_0.322478816481785 chr2 30759370 30760646 + 0.322478816481785 NA Intergenic Intergenic 38798 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_100_79_0.0475698043700508_6.34571299707239_0.322478816481785 chr6 52237634 52239210 + 0.322478816481785 NA intron (NM_001122950, intron 1 of 1) intron (NM_001122950, intron 1 of 1) 2432 NM_001122950 15395 Mm.5 NM_008263 ENSMUSG00000000938 Hoxa10 Hox-1.8|Hoxa-10 homeobox A10 protein-coding common_peak1_95_83_-0.0955517354799982_6.34454155503876_0.322478816481785 chr8 122148942 122149950 + 0.322478816481785 NA Intergenic Intergenic -132695 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_220_186_-0.0556754314603545_7.51905674415746_0.322389697454502 chr1 162132698 162135410 + 0.322389697454502 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -83569 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak2_228_180_0.0423124409289883_7.5210021075477_0.322389697454452 chr3 96218851 96220859 + 0.322389697454452 NA promoter-TSS (NM_178213) promoter-TSS (NM_178213) -61 NM_178213 621893 NM_178213 ENSMUSG00000063689 Hist2h2ab EG621893|H2a-613a histone cluster 2, H2ab protein-coding common_peak1_102_80_0.0577373621736026_6.36871868397143_0.322217193287928-3 chr7 118115365 118116096 + 0.322217193287928 NA intron (NM_170669, intron 1 of 4) intron (NM_170669, intron 1 of 4) 417 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak1_97_84_-0.0830877723448911_6.36784704996526_0.322217193287928 chr2 181287146 181287993 + 0.322217193287928 NA intron (NM_198169, intron 1 of 9) CpG 397 NM_198169 229004 Mm.220423 NM_198169 ENSMUSG00000038705 Gmeb2 AI839884 glucocorticoid modulatory element binding protein 2 protein-coding common_peak1_102_80_0.0577373621736026_6.36871868397143_0.322217193287928 chr10 59897901 59898791 + 0.322217193287928 NA TTS (NM_019965) TTS (NM_019965) 18755 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_97_84_-0.0830877723448911_6.36784704996526_0.322217193287928-2 chr3 98057495 98058315 + 0.322217193287928 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 44367 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_97_84_-0.0830877723448911_6.36784704996526_0.322217193287928-2 chr2 180920003 180920944 + 0.322217193287928 NA intron (NM_173761, intron 1 of 4) CpG 463 NM_173761 228994 Mm.30205 NM_173761 ENSMUSG00000038848 Ythdf1 2210410K23Rik|8030473O16 YTH domain family 1 protein-coding common_peak2_97_84_-0.0830877723448911_6.36784704996526_0.322217193287928 chr11 44469900 44471172 + 0.322217193287928 NA promoter-TSS (NM_024475) promoter-TSS (NM_024475) 12 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding common_peak1_102_80_0.0577373621736026_6.36871868397143_0.322217193287928-2 chr6 91646461 91647491 + 0.322217193287928 NA Intergenic Intergenic -37091 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_102_80_0.0577373621736026_6.36871868397143_0.322217193287928 chr19 6241710 6242504 + 0.322217193287928 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 439 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding common_peak1_160_126_0.0487726850249741_7.01307102928465_0.322154600882452 chr2 104493243 104494474 + 0.322154600882452 NA intron (NM_010434, intron 1 of 15) CpG 631 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding common_peak2_159_126_0.0398473174797767_7.00860834551205_0.322154600882452 chr8 104640854 104642351 + 0.322154600882452 NA exon (NM_026753, exon 1 of 5) exon (NM_026753, exon 1 of 5) 126 NM_026753 68523 Mm.279 NM_026753 ENSMUSG00000031879 Fam96b 1110019N10Rik family with sequence similarity 96, member B protein-coding common_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-6 chr8 122148012 122148516 + 0.322047890816902 NA Intergenic Intergenic -133877 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-5 chr13 59942293 59943158 + 0.322047890816902 NA Intergenic Intergenic -86986 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-9 chr7 27591738 27592338 + 0.322047890816902 NA intron (NM_001110208, intron 1 of 13) CpG 486 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding common_peak2_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-3 chr17 32787791 32788229 + 0.322047890816902 NA promoter-TSS (NM_001346705) promoter-TSS (NM_001346705) 277 NM_172458 208292 Mm.38813 NM_172458 ENSMUSG00000024298 Zfp871 4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006 zinc finger protein 871 protein-coding common_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902 chr10 93588612 93589602 + 0.322047890816902 NA promoter-TSS (NR_045810) promoter-TSS (NR_045810) -306 NR_045810 74454 Mm.410794 NR_045810 ENSMUSG00000097407 4933408J17Rik - RIKEN cDNA 4933408J17 gene ncRNA common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-3 chr19 32387969 32388499 + 0.322047890816902 NA promoter-TSS (NR_033198) promoter-TSS (NR_033198) -185 NM_001362423 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-2 chr13 98354322 98354945 + 0.322047890816902 NA exon (NM_008242, exon 1 of 1) exon (NM_008242, exon 1 of 1) 388 NM_008242 15229 Mm.347441 NM_008242 ENSMUSG00000078302 Foxd1 AI385632|BF-2|FREAC4|Hfh10|Hfhbf2 forkhead box D1 protein-coding common_peak2_57_45_0.0513510653202536_5.54923748871714_0.322047890816902 chr1 183113027 183113563 + 0.322047890816902 NA intron (NM_001278218, intron 3 of 8) intron (NM_001278218, intron 3 of 8) 34262 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-8 chr4 139599387 139600152 + 0.322047890816902 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) -23125 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-3 chr4 107803004 107803767 + 0.322047890816902 NA intron (NM_001080926, intron 2 of 18) CpG-10112 1126 NM_001080926 16975 Mm.442134 NM_053073 ENSMUSG00000028613 Lrp8 4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-7 chr2 164518239 164518872 + 0.322047890816902 NA Intergenic Intergenic 21030 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_54_48_-0.115877542764269_5.55677107273307_0.322047890816902 chr18 68084969 68085800 + 0.322047890816902 NA intron (NM_172631, intron 2 of 5) intron (NM_172631, intron 2 of 5) -142562 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902 chr15 62500290 62500989 + 0.322047890816902 NA Intergenic Intergenic -281188 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-3 chr7 66365213 66365799 + 0.322047890816902 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 16218 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-6 chr5 38039311 38039914 + 0.322047890816902 NA intron (NM_001359398, intron 1 of 9) intron (NM_001359398, intron 1 of 9) 382 NM_026959 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-3 chr11 120673095 120673825 + 0.322047890816902 NA intron (NM_026877, intron 1 of 15) CpG 487 NM_026877 68938 Mm.294020 NM_026877 ENSMUSG00000025142 Aspscr1 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG alveolar soft part sarcoma chromosome region, candidate 1 (human) protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-6 chr16 11455186 11455808 + 0.322047890816902 NA intron (NM_028964, intron 13 of 20) MLT1K|LTR|ERVL-MaLR 49849 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-5 chr8 46687024 46687249 + 0.322047890816902 NA Intergenic Intergenic 52379 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak2_58_45_0.0758391292656668_5.56148152068985_0.322047890816902 chr1 20999052 20999927 + 0.322047890816902 NA Intergenic Intergenic 47863 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902 chr1 106717978 106718600 + 0.322047890816902 NA Intergenic Intergenic -3999 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-2 chr16 24885592 24886423 + 0.322047890816902 NA intron (NM_178665, intron 9 of 12) intron (NM_178665, intron 9 of 12) 164152 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-4 chr12 79597828 79598470 + 0.322047890816902 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 300798 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-4 chr4 83305413 83306015 + 0.322047890816902 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 18475 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-4 chr6 100826968 100827528 + 0.322047890816902 NA Intergenic Intergenic -6390 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-2 chr8 36642202 36642725 + 0.322047890816902 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -28520 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-4 chr8 105854776 105855167 + 0.322047890816902 NA promoter-TSS (NM_021513) promoter-TSS (NM_021513) -132 NM_021513 59016 Mm.286598 NM_021513 ENSMUSG00000036442 Thap11 2810036E22Rik|AB041579|CTG-B43a|CTG-B45d|Ronin THAP domain containing 11 protein-coding unique_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902 chr7 49809386 49810208 + 0.322047890816902 NA intron (NM_133740, intron 10 of 15) RMER5|LTR|ERV1 31439 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-7 chr9 97018128 97018819 + 0.322047890816902 NA promoter-TSS (NM_145134) promoter-TSS (NM_145134) -118 NM_145134 211949 Mm.491271 NM_145134 ENSMUSG00000046997 Spsb4 D030068E18Rik|SSB-4|Ssb4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-5 chr4 100095777 100096528 + 0.322047890816902 NA 5' UTR (NM_001312690, exon 1 of 4) 5' UTR (NM_001312690, exon 1 of 4) 361 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak2_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-2 chr10 85871820 85872446 + 0.322047890816902 NA intron (NM_133993, intron 1 of 14) CpG 302 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak2_54_48_-0.115877542764269_5.55677107273307_0.322047890816902-2 chr11 118418491 118418995 + 0.322047890816902 NA intron (NM_029502, intron 1 of 4) intron (NM_029502, intron 1 of 4) 375 NM_001025617 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding unique_peak1_57_45_0.0513510653202536_5.54923748871714_0.322047890816902-2 chr8 13907641 13908455 + 0.322047890816902 NA intron (NM_025785, intron 1 of 9) CpG 309 NM_001359061 66822 Mm.37950 NM_025785 ENSMUSG00000038365 Fbxo25 9130015I06Rik|AI649137|Fbx25 F-box protein 25 protein-coding common_peak1_58_45_0.0758391292656668_5.56148152068985_0.322047890816902-2 chr16 24885589 24886444 + 0.322047890816902 NA intron (NM_178665, intron 9 of 12) intron (NM_178665, intron 9 of 12) 164161 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_231_183_0.0372411061737656_7.5421825091439_0.322045156010906 chr11 77782115 77784805 + 0.322045156010906 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) 6225 NM_001291212 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_98_85_-0.0854181476501292_6.38355568087703_0.321961876121209 chr13 76017674 76018558 + 0.321961876121209 NA 5' UTR (NM_178916, exon 1 of 4) 5' UTR (NM_178916, exon 1 of 4) 446 NM_178916 218341 Mm.266515 NM_178916 ENSMUSG00000043190 Rfesd AI256775|D030068K09 Rieske (Fe-S) domain containing protein-coding common_peak1_103_81_0.0538762106905404_6.38449010996335_0.321961876121209-2 chr17 35049843 35050904 + 0.321961876121209 NA 5' UTR (NM_033444, exon 1 of 6) 5' UTR (NM_033444, exon 1 of 6) 130 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak2_103_81_0.0538762106905404_6.38449010996335_0.321961876121209 chr1 24099371 24100322 + 0.321961876121209 NA intron (NM_026604, intron 1 of 20) CpG 495 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding common_peak2_98_85_-0.0854181476501292_6.38355568087703_0.321961876121209 chr1 56972545 56973650 + 0.321961876121209 NA non-coding (NR_024325, exon 1 of 1) non-coding (NR_024325, exon 1 of 1) 1628 NR_024326 329160 Mm.419039 NR_024325 ENSMUSG00000087022 9130024F11Rik B530002L08|EG329160 RIKEN cDNA 9130024F11 gene ncRNA common_peak2_98_85_-0.0854181476501292_6.38355568087703_0.321961876121209-3 chr19 53528315 53529054 + 0.321961876121209 NA promoter-TSS (NM_001085390) promoter-TSS (NM_001085390) -634 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_98_85_-0.0854181476501292_6.38355568087703_0.321961876121209-2 chr13 60897603 60898505 + 0.321961876121209 NA promoter-TSS (NM_001145801) promoter-TSS (NM_001145801) -607 NM_001145801 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding common_peak1_103_81_0.0538762106905404_6.38449010996335_0.321961876121209 chr15 62287673 62288724 + 0.321961876121209 NA Intergenic B3A|SINE|B2 -68747 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_156_133_-0.0646718794333658_7.03375325074109_0.321830812221259 chr15 66882856 66884253 + 0.321830812221259 NA Intergenic AT_rich|Low_complexity|Low_complexity -7839 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_234_185_0.0400494318014131_7.55918352700874_0.321821571393902 chr1 172501211 172503924 + 0.321821571393902 NA intron (NM_178598, intron 1 of 4) intron (NM_178598, intron 1 of 4) 2321 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding common_peak1_226_191_-0.0553701906263111_7.557277405408_0.321821571393902 chr10 12867343 12869643 + 0.321821571393902 NA Intergenic Intergenic -6758 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_234_185_0.0400494318014131_7.55918352700874_0.321821571393902 chr10 128909027 128911467 + 0.321821571393902 NA intron (NM_007653, intron 1 of 7) CpG 381 NM_007653 12512 Mm.371552 NM_007653 ENSMUSG00000025351 Cd63 C75951|ME491|Tspan30 CD63 antigen protein-coding common_peak1_310_260_-0.0472959325624984_8.00425803028864_0.321771798819212 chr18 36414328 36417854 + 0.321771798819212 NA intron (NM_026027, intron 3 of 3) RSINE1|SINE|B4 38404 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528 chr1 89457567 89457911 + 0.321718508207528 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 2928 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-4 chr13 15665821 15666136 + 0.321718508207528 NA intron (NM_008130, intron 10 of 14) intron (NM_008130, intron 10 of 14) 136652 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-18 chr7 81523186 81523490 + 0.321718508207528 NA promoter-TSS (NR_045299) promoter-TSS (NR_045299) -212 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-15 chr4 150373558 150374067 + 0.321718508207528 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 91896 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-21 chr8 22060799 22061191 + 0.321718508207528 NA promoter-TSS (NM_007511) promoter-TSS (NM_007511) 274 NM_183142 207958 Mm.267439 NM_183142 ENSMUSG00000063362 Alg11 AI849156|AW492253|B230397C21|Mmat-4(5) asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-13 chr2 120404969 120405217 + 0.321718508207528 NA promoter-TSS (NM_001110496) promoter-TSS (NM_001110496) -977 NM_001110496 211499 Mm.260712 NM_173734 ENSMUSG00000033808 Tmem87a A930025J12Rik transmembrane protein 87A protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-5 chr13 103387381 103387654 + 0.321718508207528 NA Intergenic Intergenic -53025 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-10 chr15 53678661 53679058 + 0.321718508207528 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -64580 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-10 chr4 138043317 138043714 + 0.321718508207528 NA intron (NM_001355699, intron 1 of 32) intron (NM_001355699, intron 1 of 32) 45690 NM_001355700 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-2 chr1 162463608 162463836 + 0.321718508207528 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 14312 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-11 chr9 67036065 67036337 + 0.321718508207528 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) 7670 NM_001164254 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-22 chr8 46617657 46618006 + 0.321718508207528 NA promoter-TSS (NR_151680) promoter-TSS (NR_151680) 540 NM_009810 12367 Mm.34405 NM_009810 ENSMUSG00000031628 Casp3 A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy caspase 3 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-17 chr7 19508750 19509138 + 0.321718508207528 NA promoter-TSS (NM_177692) promoter-TSS (NM_177692) 274 NM_025960 67091 Mm.44213 NM_025960 ENSMUSG00000002043 Trappc6a 1810073E21Rik|4930519D19Rik|AI480686|TRS33|mhyp trafficking protein particle complex 6A protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528 chr1 60000554 60001012 + 0.321718508207528 NA intron (NM_001357296, intron 9 of 10) intron (NM_001357296, intron 9 of 10) 42339 NM_001357296 70375 Mm.17834 NM_027407 ENSMUSG00000026018 Ica1l 1700030B17Rik|Als2cr15|b2b3465Clo islet cell autoantigen 1-like protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-7 chr19 43676331 43676604 + 0.321718508207528 NA non-coding (NR_045645, exon 1 of 1) non-coding (NR_045645, exon 1 of 1) 1289 NR_045645 100502982 Mm.313570 NR_045645 BC037704 - cDNA sequence BC037704 ncRNA common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-12 chr2 25497283 25497762 + 0.321718508207528 NA Intergenic Intergenic 2984 NM_027062 69379 Mm.24596 NM_027062 ENSMUSG00000015083 C8g - complement component 8, gamma polypeptide protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-4 chr13 98692227 98692504 + 0.321718508207528 NA exon (NM_001025606, exon 2 of 4) exon (NM_001025606, exon 2 of 4) 2466 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-3 chr12 17040259 17040539 + 0.321718508207528 NA Intergenic Intergenic -28672 NM_001201333 73667 Mm.159048 NM_001201332 ENSMUSG00000071398 2410004P03Rik - RIKEN cDNA 2410004P03 gene protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-8 chr3 96727153 96727410 + 0.321718508207528 NA promoter-TSS (NM_026406) promoter-TSS (NM_026406) 158 NM_028925 74414 Mm.276043 NM_028925 ENSMUSG00000028099 Polr3c 4933407E01Rik|RPC3|RPC62 polymerase (RNA) III (DNA directed) polypeptide C protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-8 chr13 103387367 103387653 + 0.321718508207528 NA Intergenic Intergenic -53018 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-7 chr13 73604370 73604621 + 0.321718508207528 NA intron (NM_146047, intron 1 of 16) intron (NM_146047, intron 1 of 16) 493 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding unique_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-4 chr5 66748610 66749104 + 0.321718508207528 NA intron (NM_001001980, intron 1 of 25) intron (NM_001001980, intron 1 of 25) 3017 NM_001001980 77569 Mm.374778 NM_001001980 ENSMUSG00000037736 Limch1 3732412D22Rik|mKIAA1102 LIM and calponin homology domains 1 protein-coding unique_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528 chr5 51552020 51552399 + 0.321718508207528 NA intron (NR_132764, intron 1 of 12) intron (NR_132764, intron 1 of 12) 1712 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-19 chr7 142470543 142470755 + 0.321718508207528 NA intron (NM_001136071, intron 1 of 10) intron (NM_001136071, intron 1 of 10) -1194 NM_001271508 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-14 chr4 150281036 150281313 + 0.321718508207528 NA promoter-TSS (NM_001085492) promoter-TSS (NM_001085492) -742 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-9 chr4 111720096 111720405 + 0.321718508207528 NA exon (NM_026470, exon 1 of 13) exon (NM_026470, exon 1 of 13) 240 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-20 chr8 4166730 4167000 + 0.321718508207528 NA intron (NM_001346730, intron 1 of 19) CpG 298 NM_001346730 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding unique_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-2 chr19 4492789 4493048 + 0.321718508207528 NA Intergenic Intergenic 5665 NM_027237 69861 Mm.282978 NM_027237 ENSMUSG00000042041 2010003K11Rik - RIKEN cDNA 2010003K11 gene protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-16 chr5 112271812 112272185 + 0.321718508207528 NA Intergenic Intergenic -4693 NM_001326590 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-6 chr18 62179308 62179801 + 0.321718508207528 NA promoter-TSS (NM_001013754) promoter-TSS (NM_001013754) 427 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-2 chr10 40141754 40142075 + 0.321718508207528 NA exon (NM_028247, exon 1 of 3) exon (NM_028247, exon 1 of 3) 340 NM_028247 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-11 chr18 67610245 67610751 + 0.321718508207528 NA Intergenic (CGG)n|Simple_repeat|Simple_repeat 30857 NM_001357523 225659 Mm.111928 NM_001081073 ENSMUSG00000073542 Cep76 6230425F05Rik|9630013E05 centrosomal protein 76 protein-coding common_peak2_26_20_0.087284407694642_4.43595962662608_0.321718508207528-3 chr12 112592438 112592824 + 0.321718508207528 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 3847 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-9 chr15 31335159 31335540 + 0.321718508207528 NA intron (NM_027496, intron 1 of 3) intron (NM_027496, intron 1 of 3) 32410 NM_001357923 67434 Mm.102470 NM_026153 ENSMUSG00000022237 Ankrd33b 0610012A05Rik|3021401C12Rik|5730557B15Rik ankyrin repeat domain 33B protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-6 chr13 60661111 60661425 + 0.321718508207528 NA intron (NM_134062, intron 2 of 26) intron (NM_134062, intron 2 of 26) 59057 NM_134062 69635 Mm.24103 NM_029653 ENSMUSG00000021559 Dapk1 D13Ucla1|DAP-Kinase death associated protein kinase 1 protein-coding unique_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-3 chr3 89287572 89288172 + 0.321718508207528 NA Intergenic Intergenic -6921 NM_001162425 13636 Mm.15675 NM_010107 ENSMUSG00000027954 Efna1 AI325262|B61|Efl1|Epl1|Eplg1|Lerk1 ephrin A1 protein-coding common_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528-5 chr13 21402380 21402634 + 0.321718508207528 NA intron (NM_001145778, intron 1 of 5) CpG 248 NM_001145778 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding unique_peak1_26_20_0.087284407694642_4.43595962662608_0.321718508207528 chr14 67715178 67715609 + 0.321718508207528 NA promoter-TSS (NM_001285933) promoter-TSS (NM_001285933) 217 NM_001110162 108912 Mm.33831 NM_175384 ENSMUSG00000048922 Cdca2 2610311M19Rik|AI586158 cell division cycle associated 2 protein-coding unique_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-2 chr3 49909012 49909517 + 0.321718508207525 NA Intergenic Intergenic -151948 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-2 chr10 79704515 79704798 + 0.321718508207525 NA intron (NM_001077184, intron 1 of 6) CpG 298 NM_009768 12215 Mm.726 NM_009768 ENSMUSG00000023175 Bsg AI115436|AI325119|CD147|EMMPRIN|HT-7 basigin protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-6 chr18 36744112 36744449 + 0.321718508207525 NA promoter-TSS (NM_011879) promoter-TSS (NM_011879) 307 NM_010885 17991 Mm.29867 NM_010885 ENSMUSG00000014294 Ndufa2 AV000592|B8|C1-B8|CI-B8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-10 chr5 135064328 135064646 + 0.321718508207525 NA exon (NM_025362, exon 1 of 1) exon (NM_025362, exon 1 of 1) 179 NM_025375 66138 Mm.439878 NM_025375 ENSMUSG00000005378 Bud23 1110003N24Rik|Wbscr22 BUD23, rRNA methyltransferase and ribosome maturation factor protein-coding unique_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-3 chr8 13665724 13666070 + 0.321718508207525 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 11690 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-5 chr4 151861092 151861355 + 0.321718508207525 NA intron (NM_001081557, intron 1 of 23) CpG 545 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-9 chr5 115071221 115071713 + 0.321718508207525 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 36495 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding unique_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-2 chr7 58822696 58823070 + 0.321718508207525 NA intron (NM_009728, intron 16 of 20) intron (NM_009728, intron 16 of 20) 164681 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-3 chr15 10672402 10672819 + 0.321718508207525 NA intron (NM_001356534, intron 2 of 16) PB1D10|SINE|Alu 40930 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525 chr10 111570621 111570980 + 0.321718508207525 NA Intergenic Intergenic 23473 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-7 chr7 16052380 16052771 + 0.321718508207525 NA Intergenic Intergenic -19270 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-9 chr9 120935774 120936222 + 0.321718508207525 NA intron (NM_007614, intron 1 of 14) intron (NM_007614, intron 1 of 14) 2420 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525 chr10 79116282 79116671 + 0.321718508207525 NA Intergenic Intergenic -18876 NM_001004362 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-12 chr8 126824600 126824896 + 0.321718508207525 NA Intergenic Intergenic -24272 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-2 chr11 51922881 51923308 + 0.321718508207525 NA Intergenic Intergenic -44537 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-7 chr19 25137842 25138130 + 0.321718508207525 NA intron (NM_028785, intron 23 of 47) intron (NM_028785, intron 23 of 47) -98989 NM_181404 107351 Mm.260722 NM_181404 ENSMUSG00000032702 Kank1 A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172 KN motif and ankyrin repeat domains 1 protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-3 chr11 84129017 84129416 + 0.321718508207525 NA intron (NM_172562, intron 1 of 15) intron (NM_172562, intron 1 of 15) 352 NM_172562 217031 Mm.45159 NM_172562 ENSMUSG00000018651 Tada2a AV319371|D030022J10Rik|Tada2l transcriptional adaptor 2A protein-coding unique_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525 chr12 86860508 86860784 + 0.321718508207525 NA Intergenic Intergenic 24168 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-6 chr6 112869524 112869895 + 0.321718508207525 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 77557 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525 chr4 129286981 129287352 + 0.321718508207525 NA promoter-TSS (NM_023485) promoter-TSS (NM_023485) -455 NM_023485 68828 Mm.132243 NM_023485 ENSMUSG00000001333 Sync 1110057H03Rik|SNIP4 syncoilin protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-8 chr2 102765538 102765765 + 0.321718508207525 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -18891 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-4 chr15 25443775 25443999 + 0.321718508207525 NA intron (NR_027376, intron 1 of 1) intron (NR_027376, intron 1 of 1) 29695 NR_027376 432939 Mm.146555 NM_001013791 Gm5468 100040583|EG432939 predicted gene 5468 ncRNA common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-11 chr7 48789127 48789348 + 0.321718508207525 NA intron (NM_028031, intron 1 of 16) CpG 234 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-8 chr8 3467279 3467570 + 0.321718508207525 NA intron (NM_026951, intron 1 of 4) PB1D11|SINE|Alu 224 NM_026951 69129 Mm.45279 NM_026951 ENSMUSG00000069633 Pex11g 1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma peroxisomal biogenesis factor 11 gamma protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-13 chrX 106015767 106016305 + 0.321718508207525 NA intron (NM_025379, intron 1 of 2) intron (NM_025379, intron 1 of 2) 336 NM_025379 66142 Mm.197728 NM_025379 ENSMUSG00000031231 Cox7b 1100001F07Rik|1110004F07Rik|C80563 cytochrome c oxidase subunit VIIb protein-coding common_peak1_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-5 chr17 36931420 36931822 + 0.321718508207525 NA intron (NR_045439, intron 2 of 2) intron (NR_045439, intron 2 of 2) 7829 NR_045439 73286 Mm.426884 NR_045439 ENSMUSG00000092239 1700031A10Rik - RIKEN cDNA 1700031A10 gene ncRNA common_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-4 chr11 97438036 97438310 + 0.321718508207525 NA Intergenic Intergenic -11987 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding unique_peak2_23_22_-0.212686309611763_4.41721880125113_0.321718508207525-3 chr8 105292242 105292474 + 0.321718508207525 NA exon (NM_177788, exon 9 of 14) exon (NM_177788, exon 9 of 14) -2830 NM_028888 74356 Mm.204876 NM_028888 ENSMUSG00000014837 4931428F04Rik AI426165|Kiaa0895l RIKEN cDNA 4931428F04 gene protein-coding common_peak1_104_82_0.0500971838530901_6.40008802327347_0.321712639679432-2 chr4 152477756 152478462 + 0.321712639679432 NA promoter-TSS (NM_001355173) promoter-TSS (NM_001355173) -33 NM_153424 260305 Mm.302496 NM_153424 ENSMUSG00000039577 Nphp4 4930564O18Rik|nmf192 nephronophthisis 4 (juvenile) homolog (human) protein-coding common_peak1_99_86_-0.0876996132696641_6.3990936892139_0.321712639679432 chr10 24445361 24446731 + 0.321712639679432 NA Intergenic Intergenic -149396 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_104_82_0.0500971838530901_6.40008802327347_0.321712639679432 chr19 32756218 32757323 + 0.321712639679432 NA promoter-TSS (NM_008960) promoter-TSS (NM_008960) -807 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak1_104_82_0.0500971838530901_6.40008802327347_0.321712639679432 chr19 5425106 5426330 + 0.321712639679432 NA promoter-TSS (NM_024176) promoter-TSS (NM_024176) 574 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_321_254_0.0360489553650387_8.01237791454138_0.321691243156485 chr11 4265318 4268561 + 0.321691243156485 NA 5' UTR (NM_001039537, exon 1 of 3) 5' UTR (NM_001039537, exon 1 of 3) 143 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-2 chr2 24563348 24564094 + 0.321605260051241 NA Intergenic Intergenic -88122 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-6 chr2 164070625 164071077 + 0.321605260051241 NA 5' UTR (NM_025996, exon 1 of 7) 5' UTR (NM_025996, exon 1 of 7) 251 NM_025996 67145 Mm.23173 NM_025996 ENSMUSG00000018322 Tomm34 2610100K07Rik|TOM34 translocase of outer mitochondrial membrane 34 protein-coding unique_peak1_59_46_0.0688887139482475_5.58903320865176_0.321605260051241 chr3 89420652 89421403 + 0.321605260051241 NA promoter-TSS (NM_001113331) promoter-TSS (NM_001113331) -594 NM_001113331 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-9 chr6 145914979 145915552 + 0.321605260051241 NA Intergenic Intergenic -16608 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-3 chr13 107891597 107892036 + 0.321605260051241 NA Intergenic Intergenic -1752 NM_145456 67263 Mm.490418 NM_145456 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_55_49_-0.119212075556044_5.5842501519967_0.321605260051241 chr2 60369808 60370371 + 0.321605260051241 NA intron (NM_013825, intron 2 of 34) intron (NM_013825, intron 2 of 34) 13142 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding common_peak2_55_49_-0.119212075556044_5.5842501519967_0.321605260051241 chr1 121567323 121568273 + 0.321605260051241 NA exon (NM_025860, exon 1 of 13) exon (NM_025860, exon 1 of 13) 182 NM_025860 66942 Mm.44219 NM_025860 ENSMUSG00000001674 Ddx18 2310005B10Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-8 chr6 30173054 30173959 + 0.321605260051241 NA intron (NR_126541, intron 1 of 1) CpG 619 NR_126540 101447999 NR_126540 Mirc35hg - microRNA cluster 35, host gene ncRNA common_peak1_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-3 chr2 164070644 164071103 + 0.321605260051241 NA 5' UTR (NM_025996, exon 1 of 7) 5' UTR (NM_025996, exon 1 of 7) 229 NM_025996 67145 Mm.23173 NM_025996 ENSMUSG00000018322 Tomm34 2610100K07Rik|TOM34 translocase of outer mitochondrial membrane 34 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-10 chr7 141477568 141478256 + 0.321605260051241 NA intron (NM_001252588, intron 1 of 7) intron (NM_001252588, intron 1 of 7) 1532 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak1_59_46_0.0688887139482475_5.58903320865176_0.321605260051241 chr17 66076607 66077483 + 0.321605260051241 NA promoter-TSS (NM_001025572) promoter-TSS (NM_001025572) 1 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-5 chr15 64223747 64224300 + 0.321605260051241 NA intron (NM_001276461, intron 3 of 28) intron (NM_001276461, intron 3 of 28) 88650 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241 chr11 95858892 95859692 + 0.321605260051241 NA intron (NR_045187, intron 1 of 1) CpG 475 NR_045187 73906 Mm.399894 NR_045187 ENSMUSG00000086015 4833417C18Rik - RIKEN cDNA 4833417C18 gene ncRNA common_peak1_55_49_-0.119212075556044_5.5842501519967_0.321605260051241-2 chr3 106547151 106547740 + 0.321605260051241 NA promoter-TSS (NM_026013) promoter-TSS (NM_026013) 180 NM_001357818 99712 Mm.429443 NM_133869 ENSMUSG00000040774 Cept1 9930118K05Rik|mCEPT1 choline/ethanolaminephosphotransferase 1 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-2 chr12 116280456 116281044 + 0.321605260051241 NA promoter-TSS (NM_028731) promoter-TSS (NM_028731) -472 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-7 chr4 147999224 148000131 + 0.321605260051241 NA Intergenic Intergenic -1045 NM_008725 230899 Mm.482123 NM_008725 ENSMUSG00000041616 Nppa ANP|Anf|Pnd natriuretic peptide type A protein-coding common_peak1_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-4 chr7 30588026 30588664 + 0.321605260051241 NA intron (NM_029274, intron 1 of 36) CpG 381 NM_001290573 75410 Mm.168688 NM_029274 ENSMUSG00000006307 Kmt2b 2610014H22Rik|Mll2|Wbp7|mKIAA0304 lysine (K)-specific methyltransferase 2B protein-coding common_peak2_59_46_0.0688887139482475_5.58903320865176_0.321605260051241-4 chr15 41611719 41612190 + 0.321605260051241 NA intron (NR_152565, intron 2 of 17) intron (NR_152565, intron 2 of 17) 162851 NM_001358977 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_55_49_-0.119212075556044_5.5842501519967_0.321605260051241-3 chr9 99131423 99131953 + 0.321605260051241 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 8523 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding common_peak1_229_193_-0.0515126007834841_7.57415654179539_0.321602694414592 chr17 26616190 26618525 + 0.321602694414592 NA intron (NM_026170, intron 3 of 9) intron (NM_026170, intron 3 of 9) 55845 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_158_135_-0.0679121633262678_7.05350675958721_0.321516800079508 chr10 79987975 79989471 + 0.321516800079508 NA exon (NM_007725, exon 1 of 7) exon (NM_007725, exon 1 of 7) 123 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding common_peak1_649_535_-0.0294571367878795_9.05136062206383_0.321515888312252 chr4 63066722 63073196 + 0.321515888312252 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 84213 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding common_peak2_100_87_-0.0899337193798839_6.41446475894736_0.321469269268128-2 chr2 10079651 10080403 + 0.321469269268128 NA promoter-TSS (NM_025280) promoter-TSS (NM_025280) 483 NM_020615 11949 Mm.12677 NM_020615 ENSMUSG00000025781 Atp5c1 1700094F02Rik|Atp5f1c ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein-coding common_peak1_101_87_-0.0758201386466357_6.42152154931398_0.321469269268128 chr16 4587012 4587936 + 0.321469269268128 NA Intergenic Intergenic -7239 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_100_87_-0.0899337193798839_6.41446475894736_0.321469269268128 chr12 104751126 104751987 + 0.321469269268128 NA intron (NM_148948, intron 1 of 26) CpG 396 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding common_peak1_100_87_-0.0899337193798839_6.41446475894736_0.321469269268128-2 chr17 69226734 69227526 + 0.321469269268128 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 50076 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA common_peak2_100_87_-0.0899337193798839_6.41446475894736_0.321469269268128 chr18 60730516 60731691 + 0.321469269268128 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 2038 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_105_83_0.0463976529178556_6.41551624923769_0.321469269268128 chr6 136803853 136804378 + 0.321469269268128 NA exon (NM_175652, exon 1 of 1) exon (NM_175652, exon 1 of 1) 316 NM_175652 320332 Mm.246720 NM_175652 ENSMUSG00000096010 Hist4h4 B130044J01Rik histone cluster 4, H4 protein-coding common_peak1_318_266_-0.0437025315042678_8.03884466593542_0.321297672034675 chr1 155215305 155217944 + 0.321297672034675 NA Intergenic Intergenic 57921 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_106_84_0.0427751008914568_6.43077848658343_0.321231560183271 chr10 40257248 40258158 + 0.321231560183271 NA promoter-TSS (NM_026113) promoter-TSS (NM_026113) 9 NM_001359491 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding common_peak1_107_84_0.056100935189213_6.43744140373231_0.321231560183271 chr7 102250418 102251399 + 0.321231560183271 NA promoter-TSS (NM_019566) promoter-TSS (NM_019566) -790 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak1_102_88_-0.0781460659081707_6.43666039801231_0.321231560183271 chr2 118109618 118110241 + 0.321231560183271 NA intron (NR_126479, intron 1 of 9) intron (NR_126479, intron 1 of 9) 1273 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak1_102_88_-0.0781460659081707_6.43666039801231_0.321231560183271-2 chr4 138972443 138973275 + 0.321231560183271 NA promoter-TSS (NM_029857) promoter-TSS (NM_029857) -46 NM_029857 77056 Mm.122336 NM_029857 ENSMUSG00000041143 Tmco4 4632413C14Rik|AI430825 transmembrane and coiled-coil domains 4 protein-coding common_peak2_102_88_-0.0781460659081707_6.43666039801231_0.321231560183271 chr11 48799494 48800656 + 0.321231560183271 NA promoter-TSS (NM_008143) promoter-TSS (NM_008143) -285 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding common_peak1_60_47_0.0621935685817201_5.61605928501202_0.321180891024066-6 chr8 105854756 105855187 + 0.321180891024066 NA promoter-TSS (NM_021513) promoter-TSS (NM_021513) -132 NM_021513 59016 Mm.286598 NM_021513 ENSMUSG00000036442 Thap11 2810036E22Rik|AB041579|CTG-B43a|CTG-B45d|Ronin THAP domain containing 11 protein-coding common_peak2_60_47_0.0621935685817201_5.61605928501202_0.321180891024066-2 chr15 8169111 8169472 + 0.321180891024066 NA 5' UTR (NM_001162906, exon 1 of 53) 5' UTR (NM_001162906, exon 1 of 53) 185 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak2_56_50_-0.122426285198894_5.61121219937205_0.321180891024066-2 chr15 76294323 76294999 + 0.321180891024066 NA exon (NM_001195537, exon 1 of 7) exon (NM_001195537, exon 1 of 7) 227 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak1_60_47_0.0621935685817201_5.61605928501202_0.321180891024066-4 chr17 29032692 29033137 + 0.321180891024066 NA intron (NR_036613, intron 1 of 6) CpG 254 NR_036613 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding common_peak1_60_47_0.0621935685817201_5.61605928501202_0.321180891024066 chr1 71652499 71653099 + 0.321180891024066 NA promoter-TSS (NR_040308) promoter-TSS (NR_040308) 435 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak1_60_47_0.0621935685817201_5.61605928501202_0.321180891024066-5 chr3 90604367 90605207 + 0.321180891024066 NA intron (NM_011311, intron 1 of 2) intron (NM_011311, intron 1 of 2) 1017 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak2_60_47_0.0621935685817201_5.61605928501202_0.321180891024066 chr12 21373747 21374194 + 0.321180891024066 NA promoter-TSS (NM_001277266) promoter-TSS (NM_001277266) -338 NM_009615 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding common_peak1_60_47_0.0621935685817201_5.61605928501202_0.321180891024066-2 chr14 69502187 69503235 + 0.321180891024066 NA Intergenic CpG 9838 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_60_47_0.0621935685817201_5.61605928501202_0.321180891024066-3 chr15 11574000 11574299 + 0.321180891024066 NA Intergenic Intergenic -174491 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_56_50_-0.122426285198894_5.61121219937205_0.321180891024066 chr11 115564312 115564925 + 0.321180891024066 NA intron (NM_001002929, intron 1 of 18) intron (NM_001002929, intron 1 of 18) 174 NM_001002929 445007 Mm.4379 NM_001002929 ENSMUSG00000020739 Nup85 Pcnt1|frount nucleoporin 85 protein-coding common_peak2_56_50_-0.122426285198894_5.61121219937205_0.321180891024066-3 chr3 145685468 145685845 + 0.321180891024066 NA Intergenic Intergenic -35671 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_56_50_-0.122426285198894_5.61121219937205_0.321180891024066 chr1 91088545 91089599 + 0.321180891024066 NA intron (NM_008515, intron 8 of 22) intron (NM_008515, intron 8 of 22) 35628 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_241_191_0.0362932806819245_7.60310914106212_0.321178480886058 chr18 35838496 35840631 + 0.321178480886058 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 9249 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_536_443_-0.0313576713593875_8.77873703067041_0.321086136207295 chr15 96284743 96288146 + 0.321086136207295 NA Intergenic CpG -1078 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak2_162_138_-0.0637980829990834_7.08704203122397_0.32106316563201 chr13 32478451 32480793 + 0.32106316563201 NA Intergenic Intergenic -141078 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_108_85_0.0524301304263481_6.45247981991527_0.320999317136451 chr6 52713739 52714453 + 0.320999317136451 NA promoter-TSS (NM_001355596) promoter-TSS (NM_001355596) -69 NM_001355596 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak1_169_134_0.0385621998930112_7.09609669699734_0.320916386007833 chr2 72289604 72291061 + 0.320916386007833 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 4631 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_163_139_-0.0653784289177723_7.09659380248608_0.320916386007833 chr8 71366398 71368144 + 0.320916386007833 NA promoter-TSS (NM_025917) promoter-TSS (NM_025917) 54 NM_025917 67023 Mm.41890 NM_025917 ENSMUSG00000002395 Use1 2010315L10Rik|5730403H22Rik|AV002165|D12|Ed2|Q-snare|p31 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-10 chr19 16372267 16372626 + 0.320777457303847 NA intron (NM_008139, intron 5 of 6) intron (NM_008139, intron 5 of 6) -57442 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA unique_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847 chr11 6388778 6389215 + 0.320777457303847 NA Intergenic Intergenic -6129 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-25 chr9 49815706 49816056 + 0.320777457303847 NA Intergenic Intergenic -16488 NM_001311065 17967 Mm.4974 NM_010875 ENSMUSG00000039542 Ncam1 CD56|E-NCAM|NCAM-1|Ncam neural cell adhesion molecule 1 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-12 chr17 6813002 6813663 + 0.320777457303847 NA Intergenic Intergenic -30552 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847 chr12 9840372 9840751 + 0.320777457303847 NA Intergenic Intergenic 266119 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-9 chr4 47310275 47310673 + 0.320777457303847 NA exon (NM_009928, exon 38 of 40) exon (NM_009928, exon 38 of 40) -42748 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-2 chr2 25228180 25228686 + 0.320777457303847 NA TTS (NM_080854) TTS (NM_080854) -3731 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-17 chr16 55524047 55524471 + 0.320777457303847 NA Intergenic Intergenic 29528 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-3 chr12 95599801 95600186 + 0.320777457303847 NA Intergenic Intergenic -92233 NM_201518 399558 Mm.341948 NM_201518 ENSMUSG00000047414 Flrt2 - fibronectin leucine rich transmembrane protein 2 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-7 chr14 57293758 57294388 + 0.320777457303847 NA intron (NM_030004, intron 5 of 7) intron (NM_030004, intron 5 of 7) 104410 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding unique_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-2 chr13 35431535 35431986 + 0.320777457303847 NA Intergenic Intergenic -219712 NR_126478 75543 Mm.489052 NR_126478 ENSMUSG00000113770 1700019C18Rik - RIKEN cDNA 1700019C18 gene ncRNA unique_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-3 chr13 59876209 59876574 + 0.320777457303847 NA Intergenic Intergenic -53244 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-13 chr5 98429402 98430086 + 0.320777457303847 NA intron (NM_001024614, intron 2 of 5) intron (NM_001024614, intron 2 of 5) 45920 NR_030484 735265 NR_030484 ENSMUSG00000105814 Mir703 Mirn703|mir-703|mmu-mir-703 microRNA 703 ncRNA common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-12 chr11 116816027 116816299 + 0.320777457303847 NA intron (NM_001347633, intron 2 of 4) intron (NM_001347633, intron 2 of 4) 11883 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-21 chr6 72215846 72216310 + 0.320777457303847 NA intron (NM_153778, intron 2 of 2) intron (NM_153778, intron 2 of 2) 19499 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-3 chr1 82634895 82635243 + 0.320777457303847 NA intron (NM_007734, intron 1 of 51) 5S|rRNA|rRNA 48148 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-6 chr14 45851139 45851437 + 0.320777457303847 NA Intergenic Intergenic -193145 NM_001042719 114874 Mm.121918 NM_176845 ENSMUSG00000037697 Ddhd1 Mir5131|PA-PLA1 DDHD domain containing 1 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-19 chr8 126920654 126920957 + 0.320777457303847 NA Intergenic PB1D9|SINE|Alu 25116 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-2 chr10 116581802 116582125 + 0.320777457303847 NA promoter-TSS (NM_028082) promoter-TSS (NM_028082) -452 NM_001359249 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-6 chr1 177338336 177338796 + 0.320777457303847 NA Intergenic Intergenic -89799 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-12 chr6 35425793 35426152 + 0.320777457303847 NA Intergenic Intergenic 95126 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-11 chr7 19508126 19508318 + 0.320777457303847 NA promoter-TSS (NM_001331181) promoter-TSS (NM_001331181) 109 NM_177692 232946 Mm.64557 NM_177692 ENSMUSG00000057667 Bloc1s3 BC043666|Blos3|E230011O18|rp biogenesis of lysosomal organelles complex-1, subunit 3 protein-coding unique_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847 chr3 84313521 84313954 + 0.320777457303847 NA Intergenic Intergenic -8962 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-10 chr16 32868513 32868861 + 0.320777457303847 NA promoter-TSS (NM_001200038) promoter-TSS (NM_001200038) -321 NM_172615 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding unique_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-6 chr9 46012968 46013319 + 0.320777457303847 NA promoter-TSS (NM_001357241) promoter-TSS (NM_001357241) 323 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-7 chr17 63678753 63679022 + 0.320777457303847 NA Intergenic Intergenic -178307 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-22 chr7 119895220 119895437 + 0.320777457303847 NA promoter-TSS (NM_001285959) promoter-TSS (NM_001285959) 130 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-4 chr12 13575355 13575830 + 0.320777457303847 NA intron (NM_027706, intron 51 of 51) intron (NM_027706, intron 51 of 51) 52054 NR_136761 102639399 Mm.122052 NR_136761 ENSMUSG00000113666 Gm35725 - predicted gene, 35725 ncRNA common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-9 chr11 49076913 49077249 + 0.320777457303847 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) 494 NM_001271677 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-20 chr9 75314315 75314846 + 0.320777457303847 NA intron (NM_010313, intron 3 of 12) intron (NM_010313, intron 3 of 12) 512 NM_138719 14697 Mm.17604 NM_010313 ENSMUSG00000032192 Gnb5 GBS|Gbeta5|flr guanine nucleotide binding protein (G protein), beta 5 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-17 chr5 92728646 92729090 + 0.320777457303847 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 45433 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-2 chr1 191224601 191224851 + 0.320777457303847 NA intron (NR_151547, intron 1 of 1) CpG 272 NR_151547 100504360 Mm.16927 NM_001033188 D730003I15Rik AU020850 RIKEN cDNA D730003I15 gene ncRNA common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-7 chr19 53312915 53313233 + 0.320777457303847 NA intron (NM_001360348, intron 1 of 5) CpG 1629 NM_001360348 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-18 chr9 65215214 65215672 + 0.320777457303847 NA 5' UTR (NM_177460, exon 2 of 7) 5' UTR (NM_177460, exon 2 of 7) 753 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-15 chr5 149374468 149374900 + 0.320777457303847 NA Intergenic Intergenic -37065 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-10 chr3 90203484 90203698 + 0.320777457303847 NA intron (NM_029937, intron 35 of 39) intron (NM_029937, intron 35 of 39) 10056 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-10 chr11 96413132 96413573 + 0.320777457303847 NA Intergenic Intergenic 47594 NM_008266 15407 Mm.890 NM_008266 ENSMUSG00000018973 Hoxb1 Hox-2.9 homeobox B1 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847 chr1 62706648 62706938 + 0.320777457303847 NA intron (NM_001077404, intron 1 of 16) CpG 3476 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-5 chr1 165193874 165194276 + 0.320777457303847 NA intron (NR_151711, intron 1 of 6) CpG 358 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847 chr1 138506756 138507126 + 0.320777457303847 NA intron (NM_021605, intron 7 of 9) intron (NM_021605, intron 7 of 9) 112816 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-3 chr11 116413184 116413524 + 0.320777457303847 NA promoter-TSS (NM_027258) promoter-TSS (NM_027258) -322 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-14 chr2 165202161 165202566 + 0.320777457303847 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 32374 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-23 chr7 141370193 141370497 + 0.320777457303847 NA Intergenic Intergenic -5235 NR_033532 320871 Mm.475463 NM_177280 ENSMUSG00000086844 B230206H07Rik - RIKEN cDNA B230206H07 gene ncRNA common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-15 chr8 22411033 22411252 + 0.320777457303847 NA promoter-TSS (NM_020560) promoter-TSS (NM_020560) -198 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding unique_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847 chr12 84617036 84617381 + 0.320777457303847 NA intron (NM_008992, intron 1 of 18) intron (NM_008992, intron 1 of 18) 258 NM_008992 19300 Mm.229109 NM_008992 ENSMUSG00000021240 Abcd4 P69r|P70R|Pxmp1l ATP-binding cassette, sub-family D (ALD), member 4 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-8 chr10 127070091 127070751 + 0.320777457303847 NA promoter-TSS (NM_025982) promoter-TSS (NM_025982) -60 NR_040660 100504703 Mm.387029 NR_040660 ENSMUSG00000112639 A730063M14Rik - RIKEN cDNA A730063M14 gene ncRNA common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847 chr12 103434335 103434694 + 0.320777457303847 NA intron (NM_194069, intron 1 of 3) intron (NM_194069, intron 1 of 3) 325 NM_194069 52668 Mm.2121 NM_026790 ENSMUSG00000064215 Ifi27 1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1 interferon, alpha-inducible protein 27 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-13 chrX 73228374 73228788 + 0.320777457303847 NA exon (NM_007978, exon 1 of 1) exon (NM_007978, exon 1 of 1) 275 NM_007978 14070 Mm.165807 NM_007978 ENSMUSG00000078317 F8a AI852759|DXUcsf1|F8a1 factor 8-associated gene A protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-11 chr16 95990489 95990848 + 0.320777457303847 NA intron (NM_019537, intron 1 of 6) CpG 292 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-2 chr10 128409252 128409519 + 0.320777457303847 NA promoter-TSS (NM_001358973) promoter-TSS (NM_001358973) -205 NM_001358973 69917 Mm.46614 NM_027257 ENSMUSG00000025374 Nabp2 2610036N15Rik|Obfc2b|SSB1 nucleic acid binding protein 2 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-18 chr5 139796662 139796930 + 0.320777457303847 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 5260 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-12 chr4 151862233 151862528 + 0.320777457303847 NA promoter-TSS (NM_001195565) promoter-TSS (NM_001195565) -612 NM_001195565 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-9 chr6 83115070 83115439 + 0.320777457303847 NA promoter-TSS (NM_020619) promoter-TSS (NM_020619) -252 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-8 chr18 31788613 31788879 + 0.320777457303847 NA promoter-TSS (NM_001357480) promoter-TSS (NM_001357480) -379 NM_001357480 69241 Mm.279898 NM_027002 ENSMUSG00000024258 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-8 chr13 99152679 99153048 + 0.320777457303847 NA Intergenic Intergenic -31960 NM_001004149 238803 Mm.343207 NM_001004149 ENSMUSG00000050919 Zfp366 DC-SCRIPT|Znf366 zinc finger protein 366 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-9 chr19 5085076 5085516 + 0.320777457303847 NA intron (NM_001001885, intron 1 of 1) CpG 181 NM_001001885 381199 Mm.329663 NM_001001885 ENSMUSG00000061451 Tmem151a AW125688|Gm961|Tmem151 transmembrane protein 151A protein-coding unique_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-2 chr4 136116775 136117149 + 0.320777457303847 NA Intergenic Intergenic -26860 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-15 chr14 55559310 55559791 + 0.320777457303847 NA promoter-TSS (NM_133734) promoter-TSS (NM_133734) -479 NR_037572 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-20 chr6 33871356 33871725 + 0.320777457303847 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -157908 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding unique_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-4 chr19 6362989 6363383 + 0.320777457303847 NA promoter-TSS (NM_011750) promoter-TSS (NM_011750) -504 NM_011750 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-8 chr2 163349671 163349908 + 0.320777457303847 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 48184 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-4 chr10 24458417 24458663 + 0.320777457303847 NA Intergenic Intergenic -136902 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-11 chr19 24981797 24982171 + 0.320777457303847 NA Intergenic Intergenic -17545 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-9 chr15 61609017 61609421 + 0.320777457303847 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 165232 NR_040350 432956 Mm.404918 NR_040350 ENSMUSG00000116031 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-4 chr15 103007692 103007898 + 0.320777457303847 NA Intergenic Intergenic -1767 NM_010465 15425 Mm.4444 NM_010465 ENSMUSG00000001661 Hoxc6 Hox-3.3|Hox-6.1 homeobox C6 protein-coding unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-7 chr8 95001992 95002540 + 0.320777457303847 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) -15426 NM_173036 54672 Mm.27995 NM_173036 ENSMUSG00000060470 Adgrg3 A030001G24Rik|AW214383|Gpr97|Pb1|Pb99 adhesion G protein-coupled receptor G3 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-7 chr10 99266127 99266637 + 0.320777457303847 NA 3' UTR (NM_026268, exon 3 of 3) 3' UTR (NM_026268, exon 3 of 3) 3151 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-11 chr5 124598871 124599332 + 0.320777457303847 NA intron (NM_026486, intron 1 of 18) intron (NM_026486, intron 1 of 18) 352 NM_026486 67978 Mm.1158 NM_026486 Tctn2 4432405B04Rik|Tect2 tectonic family member 2 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-12 chr7 79279029 79279479 + 0.320777457303847 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 5988 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-9 chr3 27656430 27656792 + 0.320777457303847 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 53841 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-5 chr11 57962291 57962663 + 0.320777457303847 NA Intergenic Intergenic -46587 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-14 chr7 139251595 139251867 + 0.320777457303847 NA intron (NM_001098636, intron 1 of 2) intron (NM_001098636, intron 1 of 2) 3249 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-16 chr5 86173007 86173268 + 0.320777457303847 NA promoter-TSS (NM_172712) promoter-TSS (NM_172712) -394 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-3 chr11 88550323 88550730 + 0.320777457303847 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -68725 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-6 chr8 71272043 71272350 + 0.320777457303847 NA promoter-TSS (NM_001142323) promoter-TSS (NM_001142323) 394 NM_001163042 76478 Mm.27355 NM_029621 ENSMUSG00000035439 Haus8 2410004L22Rik|Hice1 4HAUS augmin-like complex, subunit 8 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-7 chr17 56626400 56626756 + 0.320777457303847 NA promoter-TSS (NM_001357897) promoter-TSS (NM_001357897) 325 NM_028782 74142 Mm.329136 NM_028782 ENSMUSG00000041168 Lonp1 1200017E13Rik|LON|Prss15 lon peptidase 1, mitochondrial protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-5 chr16 92554007 92554372 + 0.320777457303847 NA Intergenic Intergenic 56042 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-17 chr8 34288356 34288632 + 0.320777457303847 NA Intergenic Intergenic -121782 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-3 chr15 27821784 27821990 + 0.320777457303847 NA intron (NM_001081302, intron 30 of 56) intron (NM_001081302, intron 30 of 56) -140345 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847 chr11 88862968 88863602 + 0.320777457303847 NA intron (NR_126433, intron 3 of 4) intron (NR_126433, intron 3 of 4) 1301 NM_001042541 11640 Mm.2969 NM_009648 ENSMUSG00000018428 Akap1 AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84 A kinase (PRKA) anchor protein 1 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847 chr10 71058868 71059330 + 0.320777457303847 NA intron (NM_031397, intron 2 of 20) intron (NM_031397, intron 2 of 20) 100591 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-13 chr18 67312340 67312641 + 0.320777457303847 NA intron (NM_053261, intron 5 of 7) intron (NM_053261, intron 5 of 7) 23267 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-6 chr13 55600578 55601088 + 0.320777457303847 NA intron (NM_146045, intron 1 of 5) intron (NM_146045, intron 1 of 5) 937 NM_001311137 218271 Mm.139825 NM_146045 ENSMUSG00000021504 B4galt7 - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-8 chr3 96593721 96594148 + 0.320777457303847 NA intron (NM_027241, intron 1 of 7) intron (NM_027241, intron 1 of 7) 247 NM_027241 69870 Mm.292739 NM_027241 ENSMUSG00000028104 Polr3gl 2010003I19Rik polymerase (RNA) III (DNA directed) polypeptide G like protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-16 chr16 49952348 49952604 + 0.320777457303847 NA Intergenic Intergenic -3354 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-10 chr6 126848823 126849100 + 0.320777457303847 NA intron (NM_025358, intron 1 of 10) intron (NM_025358, intron 1 of 10) 183 NM_025358 66108 Mm.29939 NM_025358 ENSMUSG00000000399 Ndufa9 1010001N11Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 protein-coding unique_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-3 chr15 81137901 81138345 + 0.320777457303847 NA intron (NM_001082536, intron 1 of 13) intron (NM_001082536, intron 1 of 13) -33076 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-2 chr11 116071908 116072705 + 0.320777457303847 NA intron (NM_001009573, intron 13 of 32) intron (NM_001009573, intron 13 of 32) 5655 NM_001009573 70450 Mm.259460 NM_001009573 ENSMUSG00000057948 Unc13d 2610108D09Rik|Jinx|Munc13-4|mFLJ00067 unc-13 homolog D (C. elegans) protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-2 chr10 67756224 67756637 + 0.320777457303847 NA Intergenic Intergenic 156232 NM_178679 216049 Mm.268346 NM_178679 ENSMUSG00000037855 Zfp365 AI839779|AV340892|DBZ|Su48|Znf365|talanin zinc finger protein 365 protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-6 chr17 5570073 5570342 + 0.320777457303847 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 77607 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-5 chr8 22134122 22134787 + 0.320777457303847 NA intron (NM_011848, intron 11 of 15) intron (NM_011848, intron 11 of 15) -9387 NM_001347318 330721 Mm.113940 NM_177898 ENSMUSG00000037738 Nek5 6530411J22|BB049667 NIMA (never in mitosis gene a)-related expressed kinase 5 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-16 chr9 108854154 108854487 + 0.320777457303847 NA 5' UTR (NM_134420, exon 1 of 18) 5' UTR (NM_134420, exon 1 of 18) 277 NM_134420 171429 Mm.45201 NM_134420 ENSMUSG00000023259 Slc26a6 B930010B04Rik|CFEX|Pat-1|Pat1 solute carrier family 26, member 6 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-8 chr2 70182770 70183226 + 0.320777457303847 NA intron (NM_177376, intron 8 of 34) intron (NM_177376, intron 8 of 34) 143872 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-2 chr1 62723168 62723647 + 0.320777457303847 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 20090 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-13 chr12 69502147 69502556 + 0.320777457303847 NA Intergenic Intergenic -26801 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-19 chr9 110781640 110781961 + 0.320777457303847 NA Intergenic CpG -16385 NM_153099 235628 Mm.292285 NM_153099 ENSMUSG00000044664 Prss42 Tessp2 protease, serine 42 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-14 chr5 120566710 120567193 + 0.320777457303847 NA intron (NM_145853, intron 2 of 27) intron (NM_145853, intron 2 of 27) 21662 NM_145853 252972 Mm.114054 NM_145853 ENSMUSG00000032741 Tpcn1 5730403B01Rik|Tpc1|mKIAA1169 two pore channel 1 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-13 chr5 104402719 104403131 + 0.320777457303847 NA Intergenic L1_Mur3|LINE|L1 -32186 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-11 chr4 48125021 48125278 + 0.320777457303847 NA intron (NM_026343, intron 1 of 7) CpG 230 NM_026343 67727 Mm.171334 NM_026343 ENSMUSG00000061455 Stx17 4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351 syntaxin 17 protein-coding unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-4 chr7 84530933 84531561 + 0.320777457303847 NA intron (NR_045098, intron 1 of 2) intron (NR_045098, intron 1 of 2) 2293 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-19 chr5 142797119 142797567 + 0.320777457303847 NA intron (NM_178242, intron 2 of 15) B4|SINE|B4 20044 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-5 chr11 117979090 117979390 + 0.320777457303847 NA Intergenic Intergenic -7617 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-7 chr13 63044404 63044845 + 0.320777457303847 NA intron (NM_001289926, intron 3 of 15) intron (NM_001289926, intron 3 of 15) 79731 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-5 chr15 99850025 99850266 + 0.320777457303847 NA intron (NM_001113545, intron 1 of 10) B1F2|SINE|Alu 25311 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-14 chr13 32496138 32496598 + 0.320777457303847 NA Intergenic Intergenic -157824 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-6 chr17 42316146 42316398 + 0.320777457303847 NA promoter-TSS (NM_001355270) promoter-TSS (NM_001355270) 325 NM_028474 627626 Mm.390999 NM_028474 ENSMUSG00000042256 Ptchd4 3110082D06Rik|Gm321 patched domain containing 4 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-6 chr18 60649194 60649620 + 0.320777457303847 NA Intergenic Intergenic -14003 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-3 chr1 193173650 193174029 + 0.320777457303847 NA intron (NM_181048, intron 1 of 1) intron (NM_181048, intron 1 of 1) 262 NM_181048 319266 Mm.482460 NM_181048 ENSMUSG00000079144 A130010J15Rik - RIKEN cDNA A130010J15 gene protein-coding unique_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-4 chr16 30883148 30883882 + 0.320777457303847 NA Intergenic Intergenic 197917 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-18 chr8 36740379 36740789 + 0.320777457303847 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -7530 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-5 chr4 9067178 9067855 + 0.320777457303847 NA Intergenic Intergenic -201777 NM_001355183 74438 Mm.473368 NM_028940 ENSMUSG00000041216 Clvs1 4933402J24Rik|Clvl1|Rlbp1l1 clavesin 1 protein-coding common_peak1_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-10 chr5 34956677 34957253 + 0.320777457303847 NA intron (NM_173402, intron 1 of 16) intron (NM_173402, intron 1 of 16) 7517 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-4 chr1 138618471 138618907 + 0.320777457303847 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 1068 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-11 chr11 115420202 115420511 + 0.320777457303847 NA promoter-TSS (NM_027862) promoter-TSS (NM_027862) 230 NM_183285 70382 Mm.276299 NM_183285 ENSMUSG00000016940 Kctd2 2310012I15Rik potassium channel tetramerisation domain containing 2 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-12 chr2 70181911 70182204 + 0.320777457303847 NA intron (NM_177376, intron 8 of 34) intron (NM_177376, intron 8 of 34) 142931 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-16 chr6 100719655 100720041 + 0.320777457303847 NA intron (NM_198612, intron 1 of 6) intron (NM_198612, intron 1 of 6) 15114 NM_198612 232313 Mm.272037 NM_198612 ENSMUSG00000030074 Gxylt2 Glt8d4|Gm152 glucoside xylosyltransferase 2 protein-coding common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-5 chr16 93006423 93006750 + 0.320777457303847 NA Intergenic Intergenic -180512 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-24 chr8 68061853 68062169 + 0.320777457303847 NA Intergenic Intergenic -87437 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-8 chr9 123367013 123367380 + 0.320777457303847 NA 5' UTR (NM_001348167, exon 1 of 21) 5' UTR (NM_001348167, exon 1 of 21) 269 NM_001348168 102436 Mm.276076 NM_153168 ENSMUSG00000035202 Lars2 AI035546|Kiaa0028|LEURS leucyl-tRNA synthetase, mitochondrial protein-coding common_peak1_25_23_-0.159424326266043_4.50525033758813_0.320777457303847-4 chr14 27507918 27508361 + 0.320777457303847 NA intron (NM_177111, intron 1 of 17) intron (NM_177111, intron 1 of 17) 321 NM_177111 320234 Mm.247767 NM_177111 ENSMUSG00000046753 Ccdc66 E230015L20Rik coiled-coil domain containing 66 protein-coding common_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-15 chr4 40238825 40239288 + 0.320777457303847 NA intron (NM_172689, intron 1 of 17) intron (NM_172689, intron 1 of 17) 769 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak2_25_23_-0.159424326266043_4.50525033758813_0.320777457303847 chr1 45795575 45795826 + 0.320777457303847 NA intron (NM_028599, intron 1 of 20) CpG 534 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-4 chr11 95310623 95310828 + 0.320777457303847 NA promoter-TSS (NM_001195004) promoter-TSS (NM_001195004) 309 NR_155298 102640811 Mm.440938 NR_155298 Gm11520 - predicted gene 11520 ncRNA common_peak2_24_23_-0.215608658995604_4.47715817122335_0.320777457303847-2 chr14 46882249 46882541 + 0.320777457303847 NA promoter-TSS (NM_028966) promoter-TSS (NM_028966) -570 NM_028966 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding common_peak2_27_21_0.0722674751546277_4.49556535621461_0.320777457303847 chr1 71970846 71971197 + 0.320777457303847 NA intron (NR_040454, intron 1 of 2) intron (NR_040454, intron 1 of 2) 34174 NR_040454 71134 Mm.370574 NR_040454 ENSMUSG00000101848 4933417E11Rik - RIKEN cDNA 4933417E11 gene ncRNA unique_peak1_27_21_0.0722674751546277_4.49556535621461_0.320777457303847-3 chr5 31452689 31453247 + 0.320777457303847 NA intron (NM_001360001, intron 1 of 12) intron (NM_001360001, intron 1 of 12) 532 NM_001360000 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding common_peak1_58_51_-0.101038632818412_5.64992040173189_0.320773676263618 chr1 136140059 136140732 + 0.320773676263618 NA intron (NM_001039472, intron 1 of 34) CpG 9005 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak1_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-2 chr10 108436678 108437540 + 0.320773676263618 NA Intergenic Intergenic 104920 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding unique_peak2_58_51_-0.101038632818412_5.64992040173189_0.320773676263618 chr9 119977642 119978688 + 0.320773676263618 NA intron (NM_153287, intron 1 of 4) intron (NM_153287, intron 1 of 4) 4858 NM_001357560 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-5 chr7 80402934 80403398 + 0.320773676263618 NA promoter-TSS (NM_011046) promoter-TSS (NM_011046) -354 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_57_51_-0.125526696763825_5.63767636975918_0.320773676263618 chr1 170884778 170885419 + 0.320773676263618 NA exon (NM_001356485, exon 1 of 5) exon (NM_001356485, exon 1 of 5) 442 NR_151476 80915 Mm.34365 NM_023173 ENSMUSG00000026659 Dusp12 1190004O14Rik|AA027408|AW049275|ESTM36|LMW-DSP4|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 protein-coding common_peak2_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-4 chr8 27128141 27128631 + 0.320773676263618 NA intron (NM_025686, intron 1 of 3) CpG 246 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-5 chr4 118409082 118409725 + 0.320773676263618 NA promoter-TSS (NM_020000) promoter-TSS (NM_020000) 66 NM_020000 80509 Mm.259567 NM_020000 ENSMUSG00000006392 Med8 2210021A15Rik|AB041805|ARC32 mediator complex subunit 8 protein-coding common_peak2_57_51_-0.125526696763825_5.63767636975918_0.320773676263618-4 chr8 26502619 26503235 + 0.320773676263618 NA Intergenic Intergenic 321496 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-4 chr12 17220933 17221631 + 0.320773676263618 NA Intergenic Intergenic -44394 NM_201531 382571 Mm.40173 NM_201531 ENSMUSG00000051726 Kcnf1 Gm1182|Kv5.1 potassium voltage-gated channel, subfamily F, member 1 protein-coding common_peak2_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-3 chr2 148878960 148879670 + 0.320773676263618 NA Intergenic Intergenic -3803 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-6 chr7 25250164 25250694 + 0.320773676263618 NA intron (NM_010155, intron 1 of 3) CpG 329 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-3 chr17 35697262 35697962 + 0.320773676263618 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 2978 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_57_51_-0.125526696763825_5.63767636975918_0.320773676263618-2 chr2 130629480 130629998 + 0.320773676263618 NA intron (NM_080562, intron 1 of 5) CpG 288 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding common_peak1_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-3 chr11 88528920 88529427 + 0.320773676263618 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -90078 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-6 chrX 163958241 163958603 + 0.320773676263618 NA 5' UTR (NM_009453, exon 1 of 11) 5' UTR (NM_009453, exon 1 of 11) 244 NM_009453 22184 Mm.426178 NM_009453 ENSMUSG00000031370 Zrsr2 35kDa|5031411E02Rik|A230052C13Rik|C77286|U2af1-rs2|URP zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 protein-coding common_peak2_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-2 chr16 44139940 44140622 + 0.320773676263618 NA intron (NM_028108, intron 1 of 4) CpG 472 NM_028108 72117 Mm.278726 NM_028108 ENSMUSG00000022698 Naa50 2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding common_peak2_57_51_-0.125526696763825_5.63767636975918_0.320773676263618-3 chr4 62738329 62739155 + 0.320773676263618 NA Intergenic Intergenic 64768 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_58_51_-0.101038632818412_5.64992040173189_0.320773676263618-5 chr15 58215066 58215627 + 0.320773676263618 NA promoter-TSS (NM_026346) promoter-TSS (NM_026346) -454 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak2_61_48_0.0557396954375733_5.64257969183399_0.320773676263618 chr12 17266657 17267620 + 0.320773676263618 NA intron (NM_027959, intron 1 of 12) intron (NM_027959, intron 1 of 12) 543 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak2_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-4 chr6 38875482 38875896 + 0.320773676263618 NA intron (NM_010433, intron 1 of 14) GC_rich|Low_complexity|Low_complexity 501 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-4 chr2 30716852 30717399 + 0.320773676263618 NA Intergenic Intergenic -4085 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_57_51_-0.125526696763825_5.63767636975918_0.320773676263618 chr12 84773328 84773951 + 0.320773676263618 NA promoter-TSS (NM_023409) promoter-TSS (NM_023409) 369 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-2 chr15 93337046 93337552 + 0.320773676263618 NA promoter-TSS (NR_028315) promoter-TSS (NR_028315) -364 NM_024189 67057 Mm.4714 NM_024189 ENSMUSG00000022634 Yaf2 2810021M11Rik YY1 associated factor 2 protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618 chr13 108403560 108404232 + 0.320773676263618 NA Intergenic Intergenic 87559 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-3 chr14 70153235 70153688 + 0.320773676263618 NA TTS (NM_001004155) TTS (NM_001004155) 330 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding common_peak2_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-2 chr13 59585331 59585843 + 0.320773676263618 NA promoter-TSS (NR_045633) promoter-TSS (NR_045633) 254 NM_030153 78689 Mm.253902 NM_030153 ENSMUSG00000021555 Naa35 A330021G12Rik|A330027C19Rik|AI158944|C030004C14Rik|Mak10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding common_peak2_57_51_-0.125526696763825_5.63767636975918_0.320773676263618-5 chr9 6644928 6645334 + 0.320773676263618 NA Intergenic Intergenic -378584 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak2_58_51_-0.101038632818412_5.64992040173189_0.320773676263618 chr15 89089112 89089688 + 0.320773676263618 NA exon (NM_027905, exon 1 of 9) exon (NM_027905, exon 1 of 9) 362 NM_027905 223776 Mm.44763 NM_027905 ENSMUSG00000035757 Selenoo 1300018J18Rik|Selo selenoprotein O protein-coding common_peak2_57_51_-0.125526696763825_5.63767636975918_0.320773676263618-2 chr19 47220073 47221023 + 0.320773676263618 NA intron (NM_021360, intron 1 of 5) MTEa|LTR|ERVL-MaLR -8295 NM_001163480 18011 Mm.313651 NM_021360 ENSMUSG00000006435 Neurl1a 2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67 neuralized E3 ubiquitin protein ligase 1A protein-coding common_peak1_61_48_0.0557396954375733_5.64257969183399_0.320773676263618-7 chr9 54699673 54700300 + 0.320773676263618 NA intron (NM_021422, intron 1 of 6) CpG 427 NM_021422 58233 Mm.489676 NM_021422 ENSMUSG00000032285 Dnaja4 1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4 DnaJ heat shock protein family (Hsp40) member A4 protein-coding common_peak1_104_90_-0.0826580249986817_6.46646562769936_0.320772353720356 chr16 32858306 32859175 + 0.320772353720356 NA intron (NM_172615, intron 1 of 18) intron (NM_172615, intron 1 of 18) 9626 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak2_109_86_0.0488338259289662_6.46736040881321_0.320772353720356-2 chr11 60536349 60537540 + 0.320772353720356 NA promoter-TSS (NM_172943) promoter-TSS (NM_172943) -739 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak2_109_86_0.0488338259289662_6.46736040881321_0.320772353720356 chr1 156035645 156036595 + 0.320772353720356 NA promoter-TSS (NM_001160182) promoter-TSS (NM_001160182) 84 NM_001160182 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak1_171_135_0.0446697298126049_7.10979770615664_0.320771741715647 chr11 59227316 59228215 + 0.320771741715647 NA intron (NM_007476, intron 1 of 4) CpG 397 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding common_peak1_171_135_0.0446697298126049_7.10979770615664_0.320771741715647-2 chr9 98275460 98276684 + 0.320771741715647 NA Intergenic Intergenic -20498 NM_001357445 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak1_247_196_0.0342877609499173_7.63919569993134_0.32067219868817 chr8 12755715 12758027 + 0.32067219868817 NA promoter-TSS (NM_001293667) promoter-TSS (NM_001293667) -145 NM_015804 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak2_166_141_-0.0598747474781378_7.11980974576561_0.320629186492666 chr2 32680370 32681705 + 0.320629186492666 NA intron (NM_001146348, intron 13 of 14) intron (NM_001146348, intron 13 of 14) 6729 NR_106168 102465885 NR_106168 ENSMUSG00000098972 Mir8093 Gm27548|mmu-mir-8093 microRNA 8093 ncRNA common_peak1_110_87_0.0453097450743556_6.48208649117448_0.320550491908828 chr6 136803898 136804444 + 0.320550491908828 NA exon (NM_175652, exon 1 of 1) exon (NM_175652, exon 1 of 1) 260 NM_175652 320332 Mm.246720 NM_175652 ENSMUSG00000096010 Hist4h4 B130044J01Rik histone cluster 4, H4 protein-coding common_peak2_105_91_-0.0848468803603968_6.48113851587681_0.320550491908803-2 chr15 59784155 59785263 + 0.320550491908803 NA Intergenic MIRb|SINE|MIR 10250 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_105_91_-0.0848468803603968_6.48113851587681_0.320550491908803 chr10 80561058 80561853 + 0.320550491908803 NA 5' UTR (NM_025852, exon 1 of 15) 5' UTR (NM_025852, exon 1 of 15) 105 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding common_peak2_105_91_-0.0848468803603968_6.48113851587681_0.320550491908803 chr13 60020004 60021168 + 0.320550491908803 NA Intergenic Intergenic -9125 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_173_137_0.0401691872533085_7.12860905040482_0.320488675402861 chr18 35562209 35563517 + 0.320488675402861 NA intron (NM_010771, intron 1 of 14) CpG 705 NM_010771 17184 Mm.215034 NM_010771 ENSMUSG00000037236 Matr3 1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723 matrin 3 protein-coding common_peak2_173_137_0.0401691872533085_7.12860905040482_0.320488675402861 chr7 78913218 78914993 + 0.320488675402861 NA promoter-TSS (NM_001113527) promoter-TSS (NM_001113527) -130 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding common_peak2_59_52_-0.104442888937314_5.67569901009454_0.320382596085891-4 chr7 45458486 45459579 + 0.320382596085891 NA intron (NM_010240, intron 2 of 3) intron (NM_010240, intron 2 of 3) 854 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding common_peak1_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-6 chrX 96126541 96127386 + 0.320382596085891 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 30918 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_62_49_0.0495141084721098_5.66861324401078_0.320382596085891 chr13 55445495 55445888 + 0.320382596085891 NA intron (NM_001038018, intron 1 of 15) CpG 360 NM_001112711 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak2_59_52_-0.104442888937314_5.67569901009454_0.320382596085891 chr11 86624557 86625113 + 0.320382596085891 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -40677 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-2 chr19 43698758 43699409 + 0.320382596085891 NA intron (NM_053103, intron 3 of 12) intron (NM_053103, intron 3 of 12) 9394 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak1_59_52_-0.104442888937314_5.67569901009454_0.320382596085891 chr11 84067411 84068074 + 0.320382596085891 NA intron (NM_019819, intron 1 of 2) intron (NM_019819, intron 1 of 2) 615 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak2_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-4 chr5 24029940 24030610 + 0.320382596085891 NA promoter-TSS (NM_001310471) promoter-TSS (NM_001310471) 37 NM_001310471 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding common_peak1_59_52_-0.104442888937314_5.67569901009454_0.320382596085891-4 chr8 119801491 119801741 + 0.320382596085891 NA Intergenic Intergenic -23200 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak1_59_52_-0.104442888937314_5.67569901009454_0.320382596085891-2 chr17 35980418 35981050 + 0.320382596085891 NA promoter-TSS (NM_001282013) promoter-TSS (NM_001282013) 779 NM_008136 14670 Mm.335754 NM_008136 ENSMUSG00000024429 Gnl1 Gna-rs1|Gnal1 guanine nucleotide binding protein-like 1 protein-coding common_peak2_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-3 chr3 135437478 135438053 + 0.320382596085891 NA promoter-TSS (NM_025356) promoter-TSS (NM_025356) -467 NM_001356594 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak2_59_52_-0.104442888937314_5.67569901009454_0.320382596085891-2 chr17 32320228 32321097 + 0.320382596085891 NA TTS (NM_017476) TTS (NM_017476) 576 NM_001357760 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak2_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-5 chr8 3430304 3431197 + 0.320382596085891 NA intron (NM_133962, intron 4 of 19) intron (NM_133962, intron 4 of 19) 36898 NM_026951 69129 Mm.45279 NM_026951 ENSMUSG00000069633 Pex11g 1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma peroxisomal biogenesis factor 11 gamma protein-coding common_peak1_59_52_-0.104442888937314_5.67569901009454_0.320382596085891-3 chr3 102667942 102668815 + 0.320382596085891 NA Intergenic Intergenic -66392 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak1_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-3 chr4 32408772 32409464 + 0.320382596085891 NA Intergenic Intergenic -8317 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-6 chrX 96126495 96127395 + 0.320382596085891 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 30900 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-5 chr8 88137916 88138207 + 0.320382596085891 NA promoter-TSS (NR_106039) promoter-TSS (NR_106039) -145 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA common_peak2_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-2 chr10 122986212 122986640 + 0.320382596085891 NA promoter-TSS (NR_029527) promoter-TSS (NR_029527) -702 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_59_52_-0.104442888937314_5.67569901009454_0.320382596085891-3 chr18 10617837 10618523 + 0.320382596085891 NA intron (NM_009226, intron 1 of 3) CpG 384 NM_009226 20641 Mm.603 NM_009226 ENSMUSG00000002477 Snrpd1 AA407109|AL023031|SMD1 small nuclear ribonucleoprotein D1 protein-coding common_peak2_62_49_0.0495141084721098_5.66861324401078_0.320382596085891 chr1 95313679 95314284 + 0.320382596085891 NA exon (NM_026321, exon 1 of 3) exon (NM_026321, exon 1 of 3) 353 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding common_peak1_62_49_0.0495141084721098_5.66861324401078_0.320382596085891-4 chr5 151112237 151112708 + 0.320382596085891 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 77721 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_168_143_-0.0629986558963695_7.13842567349413_0.320350164789703 chr19 40830840 40832298 + 0.320350164789703 NA intron (NM_172839, intron 1 of 5) CpG 290 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak2_112_88_0.054589270693854_6.50302806631333_0.320333561591459 chr8 122460762 122462223 + 0.320333561591459 NA promoter-TSS (NM_013914) promoter-TSS (NM_013914) -800 NM_013914 30927 Mm.103673 NM_013914 ENSMUSG00000006587 Snai3 AI643946|Smuc|Zfp293 snail family zinc finger 3 protein-coding common_peak1_111_88_0.0418557036790386_6.49666128280592_0.320333561591459 chr11 116109348 116110705 + 0.320333561591459 NA exon (NM_172570, exon 1 of 6) exon (NM_172570, exon 1 of 6) 209 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding common_peak1_111_88_0.0418557036790386_6.49666128280592_0.320333561591459-2 chr19 6127580 6128489 + 0.320333561591459 NA intron (NM_026912, intron 1 of 7) intron (NM_026912, intron 1 of 7) 181 NM_026912 69024 Mm.329629 NM_026912 ENSMUSG00000024787 Snx15 1500032B08Rik|E130013C21Rik sorting nexin 15 protein-coding common_peak2_111_88_0.0418557036790386_6.49666128280592_0.320333561591459 chr2 60962298 60963444 + 0.320333561591459 NA 5' UTR (NM_020296, exon 1 of 14) 5' UTR (NM_020296, exon 1 of 14) 333 NM_020296 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_106_92_-0.0869927740788725_6.49566242406859_0.320333561591435 chr3 31093726 31094206 + 0.320333561591435 NA Intergenic Intergenic -1092 NM_001039090 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak1_106_92_-0.0869927740788725_6.49566242406859_0.320333561591435 chr19 5389361 5390448 + 0.320333561591435 NA non-coding (NR_033224, exon 1 of 1) non-coding (NR_033224, exon 1 of 1) -1201 NM_016882 20227 Mm.34562 NM_016882 ENSMUSG00000039148 Sart1 U5-110K squamous cell carcinoma antigen recognized by T cells 1 protein-coding common_peak2_106_92_-0.0869927740788725_6.49566242406859_0.320333561591435-2 chr8 108897206 108898020 + 0.320333561591435 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -39247 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak1_107_92_-0.0736669397811163_6.50232534121747_0.320333561591435 chr7 90456578 90457862 + 0.320333561591435 NA promoter-TSS (NM_025460) promoter-TSS (NM_025460) -12 NM_025460 66271 Mm.28963 NM_025460 ENSMUSG00000030615 Tmem126a 1810020E01Rik transmembrane protein 126A protein-coding common_peak2_170_144_-0.0561294105881212_7.15184438472087_0.320213612231709 chr8 70460885 70461858 + 0.320213612231709 NA intron (NM_178771, intron 1 of 2) RSINE1|SINE|B4 15572 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_113_89_0.0510909808696818_6.51739858676452_0.320121400138216 chr7 119895818 119896828 + 0.320121400138216 NA promoter-TSS (NM_173408) promoter-TSS (NM_173408) 31 NM_029610 73919 Mm.46381 NM_029610 ENSMUSG00000030922 Lyrm1 1110065L10Rik|2310004B22Rik|4930404J24Rik LYR motif containing 1 protein-coding common_peak1_108_93_-0.0758939665491916_6.51664186840304_0.320121400138191 chr1 36017694 36018695 + 0.320121400138191 NA Intergenic Intergenic -50206 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak2_108_93_-0.0758939665491916_6.51664186840304_0.320121400138191 chr1 36017502 36018659 + 0.320121400138191 NA Intergenic Intergenic -50320 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak1_108_93_-0.0758939665491916_6.51664186840304_0.320121400138191-2 chr19 10895183 10895749 + 0.320121400138191 NA exon (NM_001253843, exon 1 of 16) exon (NM_001253843, exon 1 of 16) 235 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak2_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-4 chr4 137470146 137470778 + 0.320006710064065 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 1659 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_63_50_0.0435047430998123_5.6941777135214_0.320006710064065 chr2 91526735 91527505 + 0.320006710064065 NA intron (NM_001165989, intron 1 of 43) CpG 358 NM_001165989 75786 Mm.168478 NM_029437 ENSMUSG00000040549 Ckap5 3110043H24Rik|4930432B04Rik|D730027C18Rik|T25636|mKIAA0097 cytoskeleton associated protein 5 protein-coding common_peak1_63_50_0.0435047430998123_5.6941777135214_0.320006710064065 chr14 46884172 46885267 + 0.320006710064065 NA 5' UTR (NM_028966, exon 2 of 12) 5' UTR (NM_028966, exon 2 of 12) 1754 NM_001037221 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding common_peak1_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-2 chr10 122986176 122986641 + 0.320006710064065 NA promoter-TSS (NR_029527) promoter-TSS (NR_029527) -684 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak1_64_50_0.0657147516642524_5.70528271780362_0.320006710064065 chr1 155083681 155084603 + 0.320006710064065 NA promoter-TSS (NR_151545) promoter-TSS (NR_151545) -878 NR_151545 671336 Mm.393476 NR_151545 ENSMUSG00000096950 Gm9530 - predicted gene 9530 ncRNA common_peak2_63_50_0.0435047430998123_5.6941777135214_0.320006710064065-2 chr9 99568364 99568942 + 0.320006710064065 NA 5' UTR (NM_001166138, exon 1 of 12) 5' UTR (NM_001166138, exon 1 of 12) 246 NM_001166138 74125 Mm.234823 NM_028768 ENSMUSG00000032468 Armc8 1200015K23Rik|Gid5|HSPC056 armadillo repeat containing 8 protein-coding common_peak2_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-2 chr4 59388178 59389147 + 0.320006710064065 NA intron (NM_001163288, intron 6 of 16) intron (NM_001163288, intron 6 of 16) 49971 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak2_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-5 chr5 44226834 44227492 + 0.320006710064065 NA promoter-TSS (NM_173764) promoter-TSS (NM_173764) -557 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding common_peak1_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-4 chr6 97148068 97148892 + 0.320006710064065 NA intron (NM_175313, intron 1 of 17) CpG 403 NM_175313 101351 Mm.116802 NM_175313 ENSMUSG00000035245 Eogt A130022J15Rik|AI447490|AW214473|AW259391|Aer61 EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding common_peak2_64_50_0.0657147516642524_5.70528271780362_0.320006710064065 chr2 116972101 116972910 + 0.320006710064065 NA Intergenic Intergenic 72353 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-3 chr4 133614736 133615442 + 0.320006710064065 NA intron (NM_001017968, intron 3 of 7) intron (NM_001017968, intron 3 of 7) -12921 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak1_64_50_0.0657147516642524_5.70528271780362_0.320006710064065-3 chr18 60671689 60672681 + 0.320006710064065 NA TTS (NR_045401) TTS (NR_045401) 8775 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_60_53_-0.107731432860592_5.70102178573317_0.320006710064053-3 chr5 103778984 103779847 + 0.320006710064053 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 24842 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_60_53_-0.107731432860592_5.70102178573317_0.320006710064053-3 chr6 113471543 113472068 + 0.320006710064053 NA intron (NM_178942, intron 1 of 17) intron (NM_178942, intron 1 of 17) 350 NM_134159 171095 Mm.213397 NM_134159 ENSMUSG00000030281 Il17rc 1110025H02Rik|Gm19850|IL-17RC|IL17-RC|IL17-RL|Il17rl interleukin 17 receptor C protein-coding common_peak1_60_53_-0.107731432860592_5.70102178573317_0.320006710064053-4 chr5 146231000 146231930 + 0.320006710064053 NA 5' UTR (NM_001359990, exon 1 of 13) intron (NM_001359991, intron 1 of 12) 215 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding common_peak1_60_53_-0.107731432860592_5.70102178573317_0.320006710064053-2 chr13 3610507 3611032 + 0.320006710064053 NA intron (NM_001360838, intron 1 of 19) CpG 339 NM_134063 105203 Mm.221609 NM_134063 ENSMUSG00000033799 Fam208b AI645998|Pap20|mKIAA2006 family with sequence similarity 208, member B protein-coding common_peak1_60_53_-0.107731432860592_5.70102178573317_0.320006710064053 chr10 81266695 81266969 + 0.320006710064053 NA promoter-TSS (NM_025317) promoter-TSS (NM_025317) 94 NM_025317 66047 Mm.43397 NM_025317 ENSMUSG00000034932 Mrpl54 0610008M19Rik|D10Sut1e mitochondrial ribosomal protein L54 protein-coding common_peak2_60_53_-0.107731432860592_5.70102178573317_0.320006710064053 chr5 72856173 72857412 + 0.320006710064053 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 11656 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_60_53_-0.107731432860592_5.70102178573317_0.320006710064053-5 chr6 119387866 119388678 + 0.320006710064053 NA intron (NM_197985, intron 1 of 7) CpG 462 NM_001355692 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak2_60_53_-0.107731432860592_5.70102178573317_0.320006710064053-2 chr5 135712721 135713517 + 0.320006710064053 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 22770 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA unique_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793 chr10 67219092 67219615 + 0.319918318021793 NA exon (NM_001242396, exon 7 of 25) exon (NM_001242396, exon 7 of 25) 33603 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-4 chr19 4207377 4207816 + 0.319918318021793 NA Intergenic Intergenic -5993 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-11 chr5 149374465 149374951 + 0.319918318021793 NA Intergenic Intergenic -37041 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-6 chr2 148681234 148681575 + 0.319918318021793 NA 5' UTR (NM_001355689, exon 1 of 6) 5' UTR (NM_001355689, exon 1 of 6) 284 NM_028986 74533 Mm.136913 NM_028986 ENSMUSG00000027439 Gzf1 8430437G08Rik|Zfp336|mGZF1 GDNF-inducible zinc finger protein 1 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-2 chr10 68280449 68281036 + 0.319918318021793 NA Intergenic Intergenic -2016 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-10 chr6 97304770 97305348 + 0.319918318021793 NA intron (NM_145148, intron 18 of 23) intron (NM_145148, intron 18 of 23) -52279 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-9 chr4 127349386 127349645 + 0.319918318021793 NA Intergenic Intergenic 4566 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-2 chr12 98006088 98006466 + 0.319918318021793 NA Intergenic Intergenic 253182 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-2 chr11 6178859 6179166 + 0.319918318021793 NA intron (NM_173748, intron 2 of 5) intron (NM_173748, intron 2 of 5) -5681 NR_029471 100042173 Mm.441799 NR_029471 Rps15a-ps6 Gm11968 ribosomal protein S15A, pseudogene 6 pseudo common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-6 chr19 29648163 29648523 + 0.319918318021793 NA promoter-TSS (NM_001081213) promoter-TSS (NM_001081213) 72 NM_001081213 226090 Mm.267131 NM_001081213 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|b2b2633Clo|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793 chr10 40141731 40142103 + 0.319918318021793 NA exon (NM_028247, exon 1 of 3) exon (NM_028247, exon 1 of 3) 337 NM_028247 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-15 chr7 73541147 73541604 + 0.319918318021793 NA non-coding (NR_037569, exon 5 of 5) non-coding (NR_037569, exon 5 of 5) 371 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-13 chr7 16417653 16417955 + 0.319918318021793 NA intron (NM_198631, intron 3 of 13) intron (NM_198631, intron 3 of 13) 16608 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-6 chr14 76555045 76555290 + 0.319918318021793 NA intron (NM_001360046, intron 2 of 3) intron (NM_001360046, intron 2 of 3) 1520 NR_153389 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding unique_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793 chr13 55483510 55484020 + 0.319918318021793 NA intron (NM_001177371, intron 1 of 14) intron (NM_001177371, intron 1 of 14) 4311 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-2 chr15 76219553 76220121 + 0.319918318021793 NA intron (NM_001163542, intron 1 of 33) intron (NM_001163542, intron 1 of 33) -4164 NR_035463 100316774 NR_035463 ENSMUSG00000087899 Mir1942 mmu-mir-1942 microRNA 1942 ncRNA common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793 chr11 98192426 98192781 + 0.319918318021793 NA intron (NM_001080118, intron 1 of 16) intron (NM_001080118, intron 1 of 16) 303 NM_013634 19014 Mm.12926 NM_013634 ENSMUSG00000018160 Med1 AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|TRIP-2|l11Jus15 mediator complex subunit 1 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-8 chr4 130792674 130793005 + 0.319918318021793 NA intron (NM_011520, intron 1 of 4) CpG 302 NM_011520 20970 Mm.206536 NM_011520 ENSMUSG00000025743 Sdc3 Synd3|mKIAA0468|syn-3 syndecan 3 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-9 chr6 52184707 52185023 + 0.319918318021793 NA intron (NM_010452, intron 2 of 4) intron (NM_010452, intron 2 of 4) 6838 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-4 chr18 84950864 84951367 + 0.319918318021793 NA exon (NM_025969, exon 1 of 6) exon (NM_025969, exon 1 of 6) 409 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik translocase of inner mitochondrial membrane 21 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-12 chr8 64673349 64673707 + 0.319918318021793 NA intron (NM_013494, intron 1 of 8) B1_Mur4|SINE|Alu 19581 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-12 chr7 84077672 84077993 + 0.319918318021793 NA intron (NM_030728, intron 1 of 28) intron (NM_030728, intron 1 of 28) 8673 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-7 chr4 89505716 89506248 + 0.319918318021793 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -182216 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-13 chr8 126684555 126684929 + 0.319918318021793 NA Intergenic Intergenic -91306 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-2 chr3 79542952 79543542 + 0.319918318021793 NA intron (NM_001162999, intron 1 of 16) intron (NM_001162999, intron 1 of 16) 24432 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-11 chr8 79491639 79492076 + 0.319918318021793 NA Intergenic Intergenic -92389 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-11 chr4 137862006 137862616 + 0.319918318021793 NA promoter-TSS (NM_199307) promoter-TSS (NM_199307) 74 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-14 chr9 61669980 61670449 + 0.319918318021793 NA Intergenic Intergenic 244296 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-4 chr12 17690913 17691254 + 0.319918318021793 NA intron (NM_016677, intron 1 of 3) CpG 274 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-7 chr5 8997312 8997753 + 0.319918318021793 NA promoter-TSS (NM_023733) promoter-TSS (NM_023733) -386 NM_023733 74114 Mm.28197 NM_023733 ENSMUSG00000003623 Crot 1200003H03Rik carnitine O-octanoyltransferase protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-3 chr18 60728774 60729257 + 0.319918318021793 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) -1449 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-3 chr10 86065059 86065435 + 0.319918318021793 NA intron (NM_013722, intron 10 of 13) intron (NM_013722, intron 10 of 13) -30607 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-11 chr8 46551511 46551712 + 0.319918318021793 NA promoter-TSS (NM_027973) promoter-TSS (NM_027973) -458 NM_027973 71876 Mm.22108 NM_027973 ENSMUSG00000031629 Cenpu 1700029A22Rik|Mlf1ip centromere protein U protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-12 chr5 33782170 33782735 + 0.319918318021793 NA intron (NM_019694, intron 1 of 13) CpG 252 NM_019694 56384 Mm.260538 NM_019694 ENSMUSG00000005299 Letm1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-10 chr7 141564066 141564421 + 0.319918318021793 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 2063 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-6 chr17 49474717 49475226 + 0.319918318021793 NA intron (NM_001008231, intron 15 of 25) intron (NM_001008231, intron 15 of 25) 46607 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-5 chr12 98006132 98006462 + 0.319918318021793 NA Intergenic Intergenic 253162 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-9 chr6 125160332 125160789 + 0.319918318021793 NA exon (NM_001302779, exon 9 of 9) exon (NM_001302779, exon 9 of 9) 5213 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-10 chr5 53267167 53267551 + 0.319918318021793 NA intron (NM_001145433, intron 1 of 2) CpG 253 NM_001145433 66278 Mm.27900 NM_001145433 ENSMUSG00000061461 Smim20 1110067B18Rik|1810013D10Rik|N28078 small integral membrane protein 20 protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793 chr12 77093163 77093513 + 0.319918318021793 NA Intergenic Intergenic -131090 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-5 chr2 84493856 84494208 + 0.319918318021793 NA Intergenic Intergenic 12841 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-7 chr19 28557311 28557618 + 0.319918318021793 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -120760 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-13 chr9 20642122 20642475 + 0.319918318021793 NA promoter-TSS (NR_153857) promoter-TSS (NR_153857) -419 NM_001361025 66177 Mm.390165 NM_025401 ENSMUSG00000084786 Ubl5 1110030M22Rik|beacon ubiquitin-like 5 protein-coding unique_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-2 chr8 124653706 124654083 + 0.319918318021793 NA intron (NM_175149, intron 1 of 3) intron (NM_175149, intron 1 of 3) 9475 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-4 chr12 111039452 111039670 + 0.319918318021793 NA promoter-TSS (NM_198023) promoter-TSS (NM_198023) -237 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-8 chr4 107523313 107523658 + 0.319918318021793 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 88766 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-7 chr17 5132906 5133226 + 0.319918318021793 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 137992 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-3 chr4 86611373 86611983 + 0.319918318021793 NA intron (NM_173400, intron 1 of 16) CpG 377 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-12 chr8 107436141 107436367 + 0.319918318021793 NA promoter-TSS (NM_025830) promoter-TSS (NM_025830) -144 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding unique_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793 chr11 80515064 80515564 + 0.319918318021793 NA intron (NM_177390, intron 21 of 21) intron (NM_177390, intron 21 of 21) -6208 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-16 chr7 142437101 142437348 + 0.319918318021793 NA intron (NM_001285861, intron 1 of 8) intron (NM_001285861, intron 1 of 8) 390 NM_001285861 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793 chr1 62718810 62719314 + 0.319918318021793 NA exon (NM_010939, exon 2 of 16) exon (NM_010939, exon 2 of 16) 15745 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-14 chr7 49252497 49252987 + 0.319918318021793 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 6553 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-3 chr11 55418462 55418767 + 0.319918318021793 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 1466 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-8 chr17 24479166 24479400 + 0.319918318021793 NA promoter-TSS (NM_001252463) promoter-TSS (NM_001252463) -205 NM_019988 56716 Mm.289516 NM_019988 ENSMUSG00000024142 Mlst8 0610033N12Rik|AA409454|AI505104|AI851821|Gbl MTOR associated protein, LST8 homolog (S. cerevisiae) protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-5 chr19 16780611 16780850 + 0.319918318021793 NA exon (NM_173028, exon 1 of 72) exon (NM_173028, exon 1 of 72) 203 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-10 chr4 125131851 125132225 + 0.319918318021793 NA Intergenic Intergenic -4157 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-9 chr4 32409817 32410078 + 0.319918318021793 NA Intergenic Intergenic -7488 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-8 chr6 43292244 43292531 + 0.319918318021793 NA Intergenic Intergenic 17167 NM_130869 18291 Mm.17715 NM_130869 ENSMUSG00000029736 Nobox OG2|Og2x NOBOX oogenesis homeobox protein-coding common_peak2_28_22_0.0584060448934975_4.55276497850376_0.319918318021793-5 chr13 45950157 45950531 + 0.319918318021793 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 14647 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding unique_peak2_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-4 chr6 85381266 85381932 + 0.319918318021793 NA Intergenic B1F|SINE|Alu -6965 NM_001003955 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak1_26_24_-0.164254359301322_4.56172901012406_0.319918318021793-3 chr17 24527539 24527795 + 0.319918318021793 NA promoter-TSS (NR_045289) promoter-TSS (NR_045289) 271 NM_153792 224619 Mm.275150 NM_153792 ENSMUSG00000052752 Traf7 RFWD1 TNF receptor-associated factor 7 protein-coding common_peak1_114_90_0.0476605807781922_6.53162493058779_0.319913851992665 chr2 18063960 18065223 + 0.319913851992665 NA promoter-TSS (NR_045539) promoter-TSS (NR_045539) 6 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak2_114_90_0.0476605807781922_6.53162493058779_0.319913851992665 chr1 59669814 59671113 + 0.319913851992665 NA intron (NM_009460, intron 1 of 4) intron (NM_009460, intron 1 of 4) 371 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding common_peak2_115_91_0.0442960857470087_6.54570999893052_0.319710768292074 chr2 30715894 30717394 + 0.319710768292074 NA Intergenic Intergenic -4566 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_110_95_-0.0802211370095032_6.5448519322164_0.319710768292049 chr12 100186612 100187481 + 0.319710768292049 NA promoter-TSS (NR_045282) promoter-TSS (NR_045282) -922 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 - predicted gene 10433 ncRNA common_peak2_65_51_0.0595712866834228_5.7302253614828_0.319645149473567 chr13 48871023 48871746 + 0.319645149473567 NA promoter-TSS (NM_011078) promoter-TSS (NM_011078) -499 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-5 chr4 119294744 119295195 + 0.319645149473567 NA promoter-TSS (NM_011732) promoter-TSS (NM_011732) -456 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding common_peak2_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-4 chr17 28232779 28233266 + 0.319645149473567 NA intron (NM_011145, intron 1 of 7) CpG 268 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak1_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-3 chr17 28232744 28233262 + 0.319645149473567 NA intron (NM_011145, intron 1 of 7) CpG 249 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak1_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-2 chr16 49937864 49938925 + 0.319645149473567 NA Intergenic Intergenic -17436 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA common_peak2_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-2 chr15 79891869 79892776 + 0.319645149473567 NA promoter-TSS (NM_001160415) promoter-TSS (NM_001160415) -86 NM_001160415 80287 Mm.284059 NM_030255 ENSMUSG00000009585 Apobec3 Apobec|Arp3|BC003314|Cem15|Gm20117|Rfv3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 protein-coding common_peak1_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-6 chr6 35541606 35542546 + 0.319645149473567 NA Intergenic Intergenic -2188 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak1_65_51_0.0595712866834228_5.7302253614828_0.319645149473567 chr15 81466815 81467537 + 0.319645149473567 NA intron (NM_019712, intron 1 of 4) intron (NM_019712, intron 1 of 4) 860 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-4 chr4 43558646 43559370 + 0.319645149473567 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 3575 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak2_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-3 chr16 87354192 87354486 + 0.319645149473567 NA exon (NM_001159331, exon 1 of 5) exon (NM_001159331, exon 1 of 5) 154 NM_026366 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding common_peak2_65_51_0.0595712866834228_5.7302253614828_0.319645149473567-5 chr2 26351363 26352001 + 0.319645149473567 NA TTS (NM_001037747) TTS (NM_001037747) 428 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak2_61_54_-0.110910173971878_5.72590462653872_0.319645149473555-2 chr18 35815028 35815593 + 0.319645149473555 NA Intergenic Intergenic -14478 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_61_54_-0.110910173971878_5.72590462653872_0.319645149473555 chr11 98962565 98963277 + 0.319645149473555 NA intron (NM_001176528, intron 1 of 7) intron (NM_001176528, intron 1 of 7) -1951 NM_001361954 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_61_54_-0.110910173971878_5.72590462653872_0.319645149473555-4 chr6 34722299 34723292 + 0.319645149473555 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 13351 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_61_54_-0.110910173971878_5.72590462653872_0.319645149473555-6 chr9 114401094 114401794 + 0.319645149473555 NA intron (NR_108101, intron 1 of 14) CpG 349 NM_001200002 100504715 Mm.290516 NM_001200002 ENSMUSG00000079260 Tmppe - transmembrane protein with metallophosphoesterase domain protein-coding common_peak2_61_54_-0.110910173971878_5.72590462653872_0.319645149473555-3 chr18 84678252 84678942 + 0.319645149473555 NA intron (NM_023149, intron 4 of 11) intron (NM_023149, intron 4 of 11) 3462 NM_001289531 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_61_54_-0.110910173971878_5.72590462653872_0.319645149473555 chr11 94161079 94161867 + 0.319645149473555 NA Intergenic Intergenic -49981 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak2_61_54_-0.110910173971878_5.72590462653872_0.319645149473555-5 chr9 101251148 101251731 + 0.319645149473555 NA intron (NM_001161362, intron 1 of 13) CpG 393 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding common_peak1_175_149_-0.0637532470453079_7.19694206697323_0.31955881660111 chr11 69995845 69997592 + 0.31955881660111 NA promoter-TSS (NM_001291127) promoter-TSS (NM_001291127) -223 NM_001291126 78246 Mm.20805 NM_030064 ENSMUSG00000018572 Phf23 JUNE-1 PHD finger protein 23 protein-coding common_peak2_262_208_0.0331054104617694_7.72391183731177_0.31955502901884 chr7 141466981 141468884 + 0.31955502901884 NA promoter-TSS (NM_001111050) promoter-TSS (NM_001111050) -161 NR_152219 100126795 Mm.386851 NR_152219 ENSMUSG00000073787 Gm10575 - predicted gene 10575 ncRNA common_peak1_112_96_-0.0695901405268762_6.56511777192369_0.319512006510297 chr19 44899037 44900311 + 0.319512006510297 NA Intergenic Intergenic -31445 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak1_111_96_-0.0823237075416916_6.55875098841628_0.319512006510297 chr15 78927394 78928061 + 0.319512006510297 NA intron (NM_008495, intron 1 of 3) intron (NM_008495, intron 1 of 3) 1002 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak2_111_96_-0.0823237075416916_6.55875098841628_0.319512006510297 chr7 118114997 118116131 + 0.319512006510297 NA intron (NM_170669, intron 1 of 4) intron (NM_170669, intron 1 of 4) 583 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak2_117_92_0.053187294641404_6.56575245842873_0.319512006510273 chr5 138992478 138993638 + 0.319512006510273 NA intron (NM_008808, intron 2 of 5) CpG 1895 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_116_92_0.0409955882287472_6.5596566052224_0.319512006510273 chr4 137642015 137643545 + 0.319512006510273 NA intron (NM_001355588, intron 22 of 26) intron (NM_001355588, intron 22 of 26) -21946 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding common_peak1_183_145_0.0389187837697484_7.20928395076489_0.319433185403794 chr11 57643957 57646099 + 0.319433185403794 NA promoter-TSS (NM_134189) promoter-TSS (NM_134189) -414 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak2_183_145_0.0389187837697484_7.20928395076489_0.319433185403794 chr15 38469156 38470710 + 0.319433185403794 NA Intergenic Intergenic 20614 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_118_93_0.0498460756597003_6.57951188950749_0.319317430124637 chr1 171410856 171412136 + 0.319317430124637 NA promoter-TSS (NM_009480) promoter-TSS (NM_009480) 183 NM_001305676 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding common_peak1_118_93_0.0498460756597003_6.57951188950749_0.319317430124637-2 chr7 119895841 119896919 + 0.319317430124637 NA promoter-TSS (NM_173408) promoter-TSS (NM_173408) 88 NM_029610 73919 Mm.46381 NM_029610 ENSMUSG00000030922 Lyrm1 1110065L10Rik|2310004B22Rik|4930404J24Rik LYR motif containing 1 protein-coding common_peak2_118_93_0.0498460756597003_6.57951188950749_0.319317430124637 chr16 20672789 20673744 + 0.319317430124637 NA intron (NM_145941, intron 1 of 32) CpG 539 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding common_peak2_113_97_-0.0717657669158518_6.57882696065728_0.319317430124612 chr4 119119866 119121344 + 0.319317430124612 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 11860 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_113_97_-0.0717657669158518_6.57882696065728_0.319317430124612 chr11 83850843 83852006 + 0.319317430124612 NA intron (NM_009330, intron 1 of 8) CpG 555 NM_009330 21410 Mm.7226 NM_009330 ENSMUSG00000020679 Hnf1b HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1 HNF1 homeobox B protein-coding common_peak1_113_97_-0.0717657669158518_6.57882696065728_0.319317430124612-2 chr8 64671630 64672874 + 0.319317430124612 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 20857 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-2 chr16 45966917 45967638 + 0.319297110585551 NA intron (NR_152226, intron 2 of 2) intron (NR_152226, intron 2 of 2) 21671 NR_152227 100503378 Mm.387133 NR_152226 ENSMUSG00000085826 Gm15638 Gm41457 predicted gene 15638 ncRNA common_peak1_62_55_-0.11398462381077_5.75036261015222_0.319297110585551 chr1 182025210 182026062 + 0.319297110585551 NA Intergenic Intergenic -5656 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak1_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-3 chr2 117249778 117250478 + 0.319297110585551 NA intron (NM_026620, intron 1 of 7) CpG 389 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak2_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-2 chr13 36117313 36117869 + 0.319297110585551 NA promoter-TSS (NM_024274) promoter-TSS (NM_024274) -52 NM_024274 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-4 chr5 91109756 91110371 + 0.319297110585551 NA Intergenic Intergenic -29536 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding common_peak1_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-4 chr4 149099304 149099838 + 0.319297110585551 NA intron (NM_019781, intron 1 of 8) CpG 241 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-5 chr7 105743833 105744306 + 0.319297110585551 NA TTS (NM_009906) TTS (NM_009906) 269 NM_020024 24075 Mm.274846 NM_020024 ENSMUSG00000043866 Taf10 30kDa|AU041226|TAFII30|Taf2h TATA-box binding protein associated factor 10 protein-coding common_peak2_62_55_-0.11398462381077_5.75036261015222_0.319297110585551 chr12 32954246 32954884 + 0.319297110585551 NA promoter-TSS (NR_044986) promoter-TSS (NR_044986) 379 NM_198710 19027 Mm.246304 NM_013635 ENSMUSG00000020570 Sypl AI314763|AI604763|D12Ertd446e|PanI|Pphn|Sypl1 synaptophysin-like protein protein-coding common_peak2_62_55_-0.11398462381077_5.75036261015222_0.319297110585551-3 chr2 164461020 164461543 + 0.319297110585551 NA intron (NM_025575, intron 1 of 3) CpG 310 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_66_52_0.0536325630771888_5.75473673610179_0.319297110585539-2 chr7 34132442 34132975 + 0.319297110585539 NA exon (NM_207212, exon 1 of 8) exon (NM_207212, exon 1 of 8) 560 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding common_peak2_66_52_0.0536325630771888_5.75473673610179_0.319297110585539-4 chr17 15396286 15396768 + 0.319297110585539 NA non-coding (NR_033586, exon 1 of 11) non-coding (NR_033586, exon 1 of 11) 281 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding common_peak2_66_52_0.0536325630771888_5.75473673610179_0.319297110585539-6 chr19 22917506 22918363 + 0.319297110585539 NA intron (NM_001035239, intron 19 of 24) intron (NM_001035239, intron 19 of 24) 167329 NR_029591 387200 NR_029591 ENSMUSG00000065507 Mir204 Mirn204|mir-204|mmu-mir-204 microRNA 204 ncRNA common_peak2_66_52_0.0536325630771888_5.75473673610179_0.319297110585539-2 chr12 111303220 111304053 + 0.319297110585539 NA intron (NM_183016, intron 27 of 36) PB1D9|SINE|Alu 32540 NM_033603 93835 Mm.197639 NM_033603 ENSMUSG00000021278 Amn - amnionless protein-coding common_peak1_66_52_0.0536325630771888_5.75473673610179_0.319297110585539 chr19 4878684 4879189 + 0.319297110585539 NA exon (NM_027476, exon 1 of 3) exon (NM_027476, exon 1 of 3) 246 NM_001168517 70605 Mm.36885 NM_027476 ENSMUSG00000006463 Zdhhc24 5730496N17Rik|Leng4 zinc finger, DHHC domain containing 24 protein-coding common_peak2_66_52_0.0536325630771888_5.75473673610179_0.319297110585539-3 chr16 23418855 23419545 + 0.319297110585539 NA Intergenic Intergenic -9933 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_66_52_0.0536325630771888_5.75473673610179_0.319297110585539 chr11 59347478 59348509 + 0.319297110585539 NA Intergenic Intergenic 27660 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_66_52_0.0536325630771888_5.75473673610179_0.319297110585539-5 chr19 4878716 4879192 + 0.319297110585539 NA exon (NM_027476, exon 1 of 3) exon (NM_027476, exon 1 of 3) 264 NM_001168517 70605 Mm.36885 NM_027476 ENSMUSG00000006463 Zdhhc24 5730496N17Rik|Leng4 zinc finger, DHHC domain containing 24 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-2 chr1 180255859 180256238 + 0.319130838712456 NA intron (NM_001128605, intron 1 of 10) CpG 252 NM_001128605 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding unique_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-2 chr10 84401605 84402063 + 0.319130838712456 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 38637 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-12 chr6 121099579 121100222 + 0.319130838712456 NA intron (NM_001270475, intron 1 of 31) L2c|LINE|L2 -18273 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-2 chr10 78217962 78218326 + 0.319130838712456 NA intron (NM_001081055, intron 5 of 22) intron (NM_001081055, intron 5 of 22) 26498 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1|b2b2416Clo|b2b2613Clo trafficking protein particle complex 10 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-7 chr15 102971405 102971823 + 0.319130838712456 NA 3' UTR (NM_010462, exon 2 of 2) 3' UTR (NM_010462, exon 2 of 2) -1736 NR_029722 723958 NR_029722 ENSMUSG00000065488 Mir196a-2 Mirn196a-2|mir-196a-2 microRNA 196a-2 ncRNA unique_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-2 chr6 122810151 122810719 + 0.319130838712456 NA Intergenic ID_B1|SINE|B4 -9749 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding unique_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456 chr10 60826403 60826668 + 0.319130838712456 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 5046 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-7 chr9 102673183 102673476 + 0.319130838712456 NA Intergenic Intergenic -44475 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456 chr1 63114668 63115222 + 0.319130838712456 NA promoter-TSS (NM_001081436) promoter-TSS (NM_001081436) 205 NR_045914 100380944 Mm.392955 NR_045914 ENSMUSG00000084799 Ino80dos Gm11602 INO80 complex subunit D, opposite strand ncRNA unique_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456 chr15 82346968 82347241 + 0.319130838712456 NA intron (NM_026914, intron 1 of 2) intron (NM_026914, intron 1 of 2) 1058 NM_026914 69029 Mm.260042 NM_026914 ENSMUSG00000022452 Smdt1 1500032L24Rik|Emre single-pass membrane protein with aspartate rich tail 1 protein-coding unique_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-3 chr3 88619605 88620267 + 0.319130838712456 NA intron (NM_001198911, intron 2 of 22) intron (NM_001198911, intron 2 of 22) -1170 NM_008487 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-17 chr8 122057351 122057603 + 0.319130838712456 NA Intergenic Intergenic 79453 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-3 chr11 120345505 120345862 + 0.319130838712456 NA TTS (NM_001313923) TTS (NM_001313923) 1730 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-2 chr10 67002912 67003242 + 0.319130838712456 NA Intergenic Intergenic -1998 NR_110511 102634101 Mm.445258 NR_110511 ENSMUSG00000112925 Gm31763 - predicted gene, 31763 ncRNA common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-6 chr17 25271308 25271796 + 0.319130838712456 NA intron (NM_011665, intron 1 of 6) intron (NM_011665, intron 1 of 6) 1879 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-3 chr15 83572159 83572454 + 0.319130838712456 NA exon (NM_009775, exon 3 of 4) exon (NM_009775, exon 3 of 4) 8733 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-10 chr9 78528201 78528466 + 0.319130838712456 NA Intergenic Intergenic -46609 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-8 chr15 76879301 76879674 + 0.319130838712456 NA 5' UTR (NM_001358816, exon 1 of 5) 5' UTR (NM_001358816, exon 1 of 5) 234 NM_001358817 223669 Mm.38948 NM_145916 ENSMUSG00000033669 Zfp7 KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2 zinc finger protein 7 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-7 chr15 13391142 13391653 + 0.319130838712456 NA Intergenic Intergenic -217722 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding unique_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-2 chr18 61554486 61554884 + 0.319130838712456 NA promoter-TSS (NM_146087) promoter-TSS (NM_146087) -588 NM_001357499 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-9 chr18 80532799 80533216 + 0.319130838712456 NA Intergenic Intergenic 11539 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-7 chr17 34836400 34836905 + 0.319130838712456 NA promoter-TSS (NM_001163770) promoter-TSS (NM_001163770) 251 NM_019442 54402 Mm.440064 NM_019442 ENSMUSG00000061207 Stk19 G11|RP1 serine/threonine kinase 19 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-4 chr11 96075205 96075505 + 0.319130838712456 NA intron (NM_007506, intron 1 of 4) intron (NM_007506, intron 1 of 4) 276 NM_001161419 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-14 chr8 46429636 46429898 + 0.319130838712456 NA Intergenic Intergenic -41270 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-6 chr9 79759318 79759644 + 0.319130838712456 NA intron (NM_009945, intron 1 of 3) intron (NM_009945, intron 1 of 3) 372 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456 chr10 17549395 17549618 + 0.319130838712456 NA Intergenic Intergenic -173722 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456 chr1 64736579 64736895 + 0.319130838712456 NA 5' UTR (NM_022721, exon 2 of 2) 5' UTR (NM_022721, exon 2 of 2) 1013 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-15 chr8 14911023 14911428 + 0.319130838712456 NA promoter-TSS (NM_172751) promoter-TSS (NM_172751) -438 NM_172751 234094 Mm.240298 NM_172751 ENSMUSG00000071176 Arhgef10 6430549H08Rik|mKIAA0294 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-5 chr12 84285502 84285891 + 0.319130838712456 NA intron (NM_001252625, intron 1 of 9) intron (NM_001252625, intron 1 of 9) 400 NM_001252626 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-3 chr11 4186874 4187140 + 0.319130838712456 NA exon (NM_134023, exon 1 of 9) exon (NM_134023, exon 1 of 9) 174 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-10 chr19 23141404 23141722 + 0.319130838712456 NA 5' UTR (NM_010638, exon 1 of 2) 5' UTR (NM_010638, exon 1 of 2) 337 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-8 chr18 16809462 16809727 + 0.319130838712456 NA promoter-TSS (NM_007664) promoter-TSS (NM_007664) -348 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding unique_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-5 chrX 170009364 170009650 + 0.319130838712456 NA Intergenic C-rich|Low_complexity|Low_complexity -30590 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-4 chr11 29692323 29692650 + 0.319130838712456 NA promoter-TSS (NM_194053) promoter-TSS (NM_194053) -412 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-13 chr7 4136305 4136758 + 0.319130838712456 NA promoter-TSS (NM_172736) promoter-TSS (NM_172736) 395 NR_033548 100037396 Mm.447887 NR_033548 ENSMUSG00000085886 D030047H15Rik Gm15924 RIKEN cDNA D030047H15 gene ncRNA common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-16 chr8 106526721 106527148 + 0.319130838712456 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 16082 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-4 chr2 84859605 84860038 + 0.319130838712456 NA exon (NM_024497, exon 12 of 15) exon (NM_024497, exon 12 of 15) 19195 NM_001083809 72401 Mm.22716 NM_024497 ENSMUSG00000027075 Slc43a1 2610016F07Rik|AA986141|Lat3|PB39|Pov1|R00504 solute carrier family 43, member 1 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-5 chr17 24649713 24650301 + 0.319130838712456 NA exon (NM_001357796, exon 1 of 6) exon (NM_001357796, exon 1 of 6) 298 NM_001357796 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-6 chr13 23581739 23582158 + 0.319130838712456 NA TTS (NM_175654) TTS (NM_175654) 346 NM_175654 319156 Mm.260530 NM_175654 ENSMUSG00000061482 Hist1h4d - histone cluster 1, H4d protein-coding unique_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-4 chr5 113098279 113098589 + 0.319130838712456 NA intron (NM_172884, intron 2 of 7) intron (NM_172884, intron 2 of 7) -16850 NM_001359009 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-14 chr7 114203035 114203651 + 0.319130838712456 NA Intergenic Intergenic 51337 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-2 chr11 4986959 4987491 + 0.319130838712456 NA intron (NM_001243044, intron 1 of 21) CpG 401 NM_001355660 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-10 chr2 34799380 34799754 + 0.319130838712456 NA intron (NM_145522, intron 1 of 7) intron (NM_145522, intron 1 of 7) 345 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding unique_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-3 chr8 61573396 61573940 + 0.319130838712456 NA intron (NM_001293772, intron 10 of 21) intron (NM_001293772, intron 10 of 21) 17501 NM_001293774 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-3 chr11 76845030 76845560 + 0.319130838712456 NA intron (NM_007754, intron 1 of 20) intron (NM_007754, intron 1 of 20) 1713 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-11 chr3 53199801 53200240 + 0.319130838712456 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 158473 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-6 chr15 66884757 66885187 + 0.319130838712456 NA Intergenic Intergenic -6421 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-8 chr9 124281028 124281380 + 0.319130838712456 NA Intergenic Intergenic 31490 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456 chr10 17009921 17010357 + 0.319130838712456 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 85643 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456 chr13 49319459 49319860 + 0.319130838712456 NA Intergenic Intergenic -10451 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-11 chr2 13438322 13438767 + 0.319130838712456 NA intron (NM_001081084, intron 22 of 66) intron (NM_001081084, intron 22 of 66) 53332 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-5 chr15 57616708 57617002 + 0.319130838712456 NA Intergenic Intergenic -77812 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-12 chr6 147042789 147043118 + 0.319130838712456 NA intron (NM_145573, intron 1 of 7) CpG 183 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding common_peak2_29_23_0.045570044477973_4.60774752296014_0.319130838712456-9 chr9 65631000 65631337 + 0.319130838712456 NA intron (NM_028030, intron 1 of 7) CpG 586 NM_028030 71973 Mm.29148 NM_028030 ENSMUSG00000032387 Rbpms2 2400008B06Rik|AI316523 RNA binding protein with multiple splicing 2 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-4 chr15 84988457 84988718 + 0.319130838712456 NA promoter-TSS (NM_001033273) promoter-TSS (NM_001033273) -616 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-13 chr7 19572776 19573002 + 0.319130838712456 NA intron (NM_027189, intron 1 of 1) intron (NM_027189, intron 1 of 1) 454 NM_027189 69731 Mm.24540 NM_027189 ENSMUSG00000044709 Gemin7 2400008I04Rik|AI120175|AI461688 gem nuclear organelle associated protein 7 protein-coding common_peak2_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-8 chr17 24643767 24644353 + 0.319130838712456 NA intron (NM_023055, intron 2 of 6) intron (NM_023055, intron 2 of 6) 897 NM_023449 65962 Mm.21587 NM_023055 ENSMUSG00000002504 Slc9a3r2 0610011L07Rik|1200011K07Rik|2010007A20Rik|E3karp|NHERF-2|Nherf2|Octs2|Sip-1|Sip1|Sryip1|Tka-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 protein-coding common_peak1_29_23_0.045570044477973_4.60774752296014_0.319130838712456-9 chr18 25510098 25510564 + 0.319130838712456 NA intron (NM_001362304, intron 3 of 12) intron (NM_001362304, intron 3 of 12) 169417 NM_001362337 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding common_peak1_27_25_-0.168740624349167_4.61606940596651_0.319130838712456-5 chr6 30355243 30355739 + 0.319130838712456 NA Intergenic Intergenic 35529 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_114_98_-0.0739013991027209_6.59240592052825_0.319126908303053 chr15 76477469 76478252 + 0.319126908303053 NA promoter-TSS (NM_013481) promoter-TSS (NM_013481) 498 NR_138589 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185|HSTF|HSTF 1|Hsf1alpha|Hsf1beta heat shock factor 1 protein-coding common_peak1_119_94_0.0465669777216933_6.59313909719179_0.319126908303029-3 chr2 45109244 45110278 + 0.319126908303029 NA intron (NR_149354, intron 2 of 2) CpG 516 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_119_94_0.0465669777216933_6.59313909719179_0.319126908303029-2 chr15 102959607 102961189 + 0.319126908303029 NA Intergenic Intergenic 5872 NM_001024842 109663 Mm.37692 NM_001024842 ENSMUSG00000001656 Hoxc11 Hox-3.7 homeobox C11 protein-coding common_peak1_119_94_0.0465669777216933_6.59313909719179_0.319126908303029 chr14 20804308 20805769 + 0.319126908303029 NA Intergenic Intergenic 10799 NR_153779 102631887 Mm.122292 NR_153779 ENSMUSG00000114241 Gm30108 - predicted gene, 30108 ncRNA common_peak2_181_153_-0.0536992758121464_7.23993690278883_0.319066310321767 chr16 23107001 23108494 + 0.319066310321767 NA non-coding (NR_110335, exon 1 of 12) non-coding (NR_110335, exon 1 of 12) 279 NM_001347179 13682 Mm.260084 NM_013506 ENSMUSG00000022884 Eif4a2 4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding common_peak2_187_148_0.0403828236934052_7.23935993230886_0.319066310321767 chr5 103753627 103755202 + 0.319066310321767 NA promoter-TSS (NM_001080798) promoter-TSS (NM_001080798) -159 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-4 chr5 136987097 136987668 + 0.31896184869903 NA promoter-TSS (NM_001310747) promoter-TSS (NM_001310747) 363 NM_011962 26433 Mm.251003 NM_011962 ENSMUSG00000004846 Plod3 AI414586|LH3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 protein-coding common_peak1_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-3 chr3 100162565 100163205 + 0.31896184869903 NA promoter-TSS (NM_175552) promoter-TSS (NM_175552) 422 NR_104341 14547 Mm.279228 NM_010269 ENSMUSG00000027865 Gdap2 C77050|D3Ertd801e ganglioside-induced differentiation-associated-protein 2 protein-coding common_peak2_63_56_-0.116959929093434_5.77441004961802_0.31896184869903-3 chr6 116207652 116208704 + 0.31896184869903 NA promoter-TSS (NR_131013) promoter-TSS (NR_131013) 145 NM_026585 28006 Mm.28524 NM_026585 ENSMUSG00000024104 Washc2 A130095H06|C530005J20Rik|D6Wsu116e|Fam21 WASH complex subunit 2 protein-coding common_peak2_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-5 chr6 113624066 113624851 + 0.31896184869903 NA intron (NM_009507, intron 1 of 2) CpG 437 NM_009507 22346 Mm.29407 NM_009507 ENSMUSG00000033933 Vhl Vhlh von Hippel-Lindau tumor suppressor protein-coding common_peak2_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-6 chrX 41911044 41911849 + 0.31896184869903 NA intron (NM_001033422, intron 1 of 38) CpG 455 NM_001033422 331401 Mm.259498 NM_001033422 ENSMUSG00000037475 Thoc2 6330441O12Rik|D130005M13Rik|Gm1139|Gm1793|Tho2 THO complex 2 protein-coding common_peak2_63_56_-0.116959929093434_5.77441004961802_0.31896184869903-2 chr13 112801003 112802019 + 0.31896184869903 NA intron (NM_008903, intron 1 of 5) intron (NM_008903, intron 1 of 5) 734 NM_008247 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding common_peak2_63_56_-0.116959929093434_5.77441004961802_0.31896184869903 chr1 151428685 151429408 + 0.31896184869903 NA promoter-TSS (NM_025819) promoter-TSS (NM_025819) 504 NM_001357570 98685 Mm.289373 NM_026876 ENSMUSG00000053286 Trmt1l 1190005F20Rik|AW226554|C1orf25|Trm1-like|Trm1l tRNA methyltransferase 1 like protein-coding common_peak2_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-3 chr3 30996334 30997348 + 0.31896184869903 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 1070 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak1_63_56_-0.116959929093434_5.77441004961802_0.31896184869903-2 chr8 64523016 64523449 + 0.31896184869903 NA Intergenic Intergenic -8791 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_67_53_0.0478883755997392_5.77883168996334_0.31896184869903 chr12 87199490 87200311 + 0.31896184869903 NA promoter-TSS (NM_001290288) promoter-TSS (NM_001290288) 329 NM_001033475 382620 Mm.374912 NM_001033475 ENSMUSG00000034111 Tmed8 6430595O10Rik|AI447224|Gm1184|Mem1 transmembrane p24 trafficking protein 8 protein-coding common_peak1_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-5 chr7 73538043 73538750 + 0.31896184869903 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 3350 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_67_53_0.0478883755997392_5.77883168996334_0.31896184869903-2 chr2 156111250 156111900 + 0.31896184869903 NA intron (NM_029397, intron 1 of 2) CpG 390 NM_170598 75710 Mm.27660 NM_029397 ENSMUSG00000089824 Rbm12 5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765 RNA binding motif protein 12 protein-coding common_peak1_67_53_0.0478883755997392_5.77883168996334_0.31896184869903 chr12 13100860 13101807 + 0.31896184869903 NA Intergenic Intergenic 147841 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903 chr1 64691138 64691799 + 0.31896184869903 NA promoter-TSS (NR_038009) promoter-TSS (NR_038009) 123 NM_001097644 227210 Mm.39706 NM_001097644 ENSMUSG00000070871 Ccnyl1 9630037P07Rik|AW554339 cyclin Y-like 1 protein-coding common_peak1_67_53_0.0478883755997392_5.77883168996334_0.31896184869903-2 chr7 4658320 4658992 + 0.31896184869903 NA 5' UTR (NM_172894, exon 1 of 24) 5' UTR (NM_172894, exon 1 of 24) 294 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak1_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-2 chr13 37993274 37994103 + 0.31896184869903 NA intron (NM_001360842, intron 1 of 8) CpG 520 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-4 chr4 134852501 134853242 + 0.31896184869903 NA intron (NM_001355499, intron 1 of 11) CpG 474 NM_001355501 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Maco1 transmembrane protein 57 protein-coding common_peak1_63_56_-0.116959929093434_5.77441004961802_0.31896184869903 chr3 88553164 88553608 + 0.31896184869903 NA promoter-TSS (NM_033526) promoter-TSS (NM_033526) -330 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak2_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903-2 chr1 166379351 166380056 + 0.31896184869903 NA intron (NM_030245, intron 1 of 7) CpG 536 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak1_64_56_-0.0947499205289937_5.78551505390024_0.31896184869903 chr11 120672863 120673885 + 0.31896184869903 NA intron (NM_026877, intron 1 of 15) CpG 401 NM_026877 68938 Mm.294020 NM_026877 ENSMUSG00000025142 Aspscr1 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG alveolar soft part sarcoma chromosome region, candidate 1 (human) protein-coding common_peak2_63_56_-0.116959929093434_5.77441004961802_0.31896184869903-4 chr9 124424820 124425658 + 0.31896184869903 NA TTS (NR_027950) TTS (NR_027950) 1452 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak2_188_149_0.0383322304051648_7.24798480569846_0.318947247896035 chr2 131261981 131263908 + 0.318947247896035 NA non-coding (NR_149748, exon 1 of 9) non-coding (NR_149748, exon 1 of 9) 105 NR_149748 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding common_peak1_115_99_-0.0759981479707026_6.60585711578937_0.318940315610422 chr3 55112134 55113109 + 0.318940315610422 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 455 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak2_115_99_-0.0759981479707026_6.60585711578937_0.318940315610422 chr4 21847580 21848470 + 0.318940315610422 NA non-coding (NR_028384, exon 1 of 1) non-coding (NR_028384, exon 1 of 1) 423 NR_028384 67735 Mm.391650 NR_028384 4930528A17Rik - RIKEN cDNA 4930528A17 gene ncRNA common_peak1_115_99_-0.0759981479707026_6.60585711578937_0.318940315610422-2 chr8 83566648 83567628 + 0.318940315610422 NA intron (NM_025843, intron 1 of 2) intron (NM_025843, intron 1 of 2) 380 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak1_265_222_-0.0441873549475167_7.77880622244655_0.318878272334874 chr18 7868437 7870319 + 0.318878272334874 NA promoter-TSS (NM_001360956) promoter-TSS (NM_001360956) 181 NM_153085 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak1_116_100_-0.0780570834150165_6.61918294104429_0.318757531733581 chr2 60692716 60693893 + 0.318757531733581 NA intron (NM_001159564, intron 1 of 17) intron (NM_001159564, intron 1 of 17) -19611 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_121_96_0.0401882475425044_6.62000696595838_0.318757531733581 chr5 139931493 139932997 + 0.318757531733581 NA intron (NM_175522, intron 1 of 1) intron (NM_175522, intron 1 of 1) 24302 NM_175522 243312 Mm.237102 NM_175522 ENSMUSG00000048988 Elfn1 A930017N06Rik|AI197272|Ppp1r28 leucine rich repeat and fibronectin type III, extracellular 1 protein-coding common_peak1_190_151_0.0343026715034318_7.2650788491953_0.31871377757465 chr19 6134193 6136501 + 0.31871377757465 NA intron (NM_019722, intron 4 of 4) intron (NM_019722, intron 4 of 4) 5790 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak1_184_156_-0.0581130682267954_7.26556421477823_0.31871377757465 chr13 34343100 34345183 + 0.31871377757465 NA intron (NM_001033167, intron 1 of 10) CpG 1041 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_68_54_0.042329190499049_5.80252430877418_0.318638672819241-2 chr15 37791395 37792315 + 0.318638672819241 NA intron (NM_001359844, intron 1 of 7) CpG 145 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241-7 chrX 160137895 160138774 + 0.318638672819241 NA promoter-TSS (NM_008810) promoter-TSS (NM_008810) 96 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241 chr11 95309799 95310166 + 0.318638672819241 NA promoter-TSS (NR_155298) promoter-TSS (NR_155298) 264 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding common_peak2_69_54_0.0629412994478988_5.81283036324861_0.318638672819241 chr10 18995318 18996359 + 0.318638672819241 NA Intergenic Intergenic 16125 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241-5 chr6 142361088 142362012 + 0.318638672819241 NA 3' UTR (NM_023042, exon 15 of 15) 3' UTR (NM_023042, exon 15 of 15) 15853 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241-2 chr17 31983177 31983878 + 0.318638672819241 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 50981 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding common_peak2_68_54_0.042329190499049_5.80252430877418_0.318638672819241 chr1 165642460 165643167 + 0.318638672819241 NA Intergenic Intergenic -8272 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241-6 chr8 126919634 126920105 + 0.318638672819241 NA Intergenic Intergenic 26052 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241-3 chr5 33651945 33652674 + 0.318638672819241 NA TTS (NM_001356983) TTS (NM_001356983) 265 NM_001289725 20492 Mm.4172 NM_009193 ENSMUSG00000004642 Slbp - stem-loop binding protein protein-coding common_peak1_69_54_0.0629412994478988_5.81283036324861_0.318638672819241 chr7 34168101 34168488 + 0.318638672819241 NA intron (NM_016682, intron 1 of 16) CpG 235 NM_016682 50995 Mm.27560 NM_016682 ENSMUSG00000052997 Uba2 AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b ubiquitin-like modifier activating enzyme 2 protein-coding common_peak1_68_54_0.042329190499049_5.80252430877418_0.318638672819241-4 chr5 140768733 140769767 + 0.318638672819241 NA intron (NM_010302, intron 2 of 3) PB1D10|SINE|Alu 45123 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding common_peak2_68_54_0.042329190499049_5.80252430877418_0.318638672819241-3 chr3 19310690 19311373 + 0.318638672819241 NA 5' UTR (NM_001122759, exon 1 of 13) 5' UTR (NM_001122759, exon 1 of 13) 291 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_65_57_-0.0979699903030573_5.80899599997604_0.318638672819228 chrX 7762890 7763614 + 0.318638672819228 NA promoter-TSS (NM_001271491) promoter-TSS (NM_001271491) 591 NM_172472 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding common_peak1_65_57_-0.0979699903030573_5.80899599997604_0.318638672819228-2 chr2 28641005 28641727 + 0.318638672819228 NA intron (NM_001289575, intron 1 of 22) CpG 133 NM_022887 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding common_peak1_65_57_-0.0979699903030573_5.80899599997604_0.318638672819228 chr13 51962224 51962786 + 0.318638672819228 NA Intergenic Intergenic 115830 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_65_57_-0.0979699903030573_5.80899599997604_0.318638672819228-3 chr4 3835049 3835622 + 0.318638672819228 NA intron (NM_026147, intron 1 of 3) CpG-9696 320 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak2_118_101_-0.0679904146341572_6.63843013465442_0.318578441221779 chr11 31564533 31565769 + 0.318578441221779 NA Intergenic Intergenic 106711 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_118_101_-0.0679904146341572_6.63843013465442_0.318578441221779-2 chr2 26388615 26390113 + 0.318578441221779 NA promoter-TSS (NM_173180) promoter-TSS (NM_173180) 16 NM_173180 66865 Mm.250359 NM_173180 ENSMUSG00000026926 Pmpca 1200002L24Rik|4933435E07Rik|Alpha-MPP|P-55 peptidase (mitochondrial processing) alpha protein-coding common_peak1_118_101_-0.0679904146341572_6.63843013465442_0.318578441221779 chr8 94097824 94099187 + 0.318578441221779 NA 5' UTR (NM_026116, exon 1 of 17) 5' UTR (NM_026116, exon 1 of 17) 306 NM_026116 67378 Mm.292107 NM_026116 ENSMUSG00000031755 Bbs2 2410125H22Rik|AI447581 Bardet-Biedl syndrome 2 (human) protein-coding common_peak1_123_97_0.0486847158643293_6.63905220204737_0.318578441221754 chr3 90051351 90052511 + 0.318578441221754 NA promoter-TSS (NM_027500) promoter-TSS (NM_027500) 295 NM_001287087 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak2_122_97_0.0370853257126846_6.63325250697155_0.318578441221754 chr17 21961910 21963148 + 0.318578441221754 NA promoter-TSS (NM_001199048) promoter-TSS (NM_001199048) -30 NM_001025373 74670 Mm.26540 NM_001025373 ENSMUSG00000053347 Zfp943 4930432O21Rik zinc finger prtoein 943 protein-coding common_peak2_269_226_-0.0484546967833639_7.80232113889923_0.318558104382307 chr15 59597949 59600108 + 0.318558104382307 NA intron (NM_026746, intron 6 of 6) intron (NM_026746, intron 6 of 6) -49626 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-7 chr4 132532655 132533009 + 0.318406410381916 NA intron (NM_007512, intron 3 of 3) intron (NM_007512, intron 3 of 3) 2582 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-4 chr13 72227595 72227827 + 0.318406410381916 NA Intergenic Intergenic -263988 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-8 chr4 44755881 44756368 + 0.318406410381916 NA promoter-TSS (NM_138590) promoter-TSS (NM_138590) -435 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-9 chr7 126898471 126898737 + 0.318406410381916 NA promoter-TSS (NM_028389) promoter-TSS (NM_028389) -326 NM_028389 68742 Mm.248646 NM_026827 ENSMUSG00000060538 Tmem219 1110032O16Rik|2900045G02Rik|IGFBP-3R transmembrane protein 219 protein-coding common_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-5 chr8 110806838 110807328 + 0.318406410381916 NA Intergenic Intergenic -1159 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916 chr9 107714240 107714687 + 0.318406410381916 NA Intergenic Intergenic -3988 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-5 chr19 4922769 4923260 + 0.318406410381916 NA intron (NM_001360711, intron 4 of 17) intron (NM_001360711, intron 4 of 17) 4956 NM_001360711 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding unique_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916 chr4 123916921 123917272 + 0.318406410381916 NA promoter-TSS (NM_017475) promoter-TSS (NM_017475) -337 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding unique_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916 chr17 45804207 45804930 + 0.318406410381916 NA Intergenic Intergenic 70062 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-3 chr18 36018343 36018762 + 0.318406410381916 NA exon (NM_001167891, exon 10 of 10) exon (NM_001167891, exon 10 of 10) 53722 NR_110349 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-10 chr7 37562952 37563354 + 0.318406410381916 NA intron (NM_172385, intron 4 of 5) intron (NM_172385, intron 4 of 5) 206599 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-10 chr9 21955773 21956006 + 0.318406410381916 NA exon (NM_025870, exon 1 of 2) exon (NM_025870, exon 1 of 2) 117 NR_132099 100049077 Mm.46647 NR_132099 Gm45914 - predicted gene, 45914 ncRNA common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-5 chr13 52892221 52892610 + 0.318406410381916 NA intron (NM_016709, intron 4 of 9) intron (NM_016709, intron 4 of 9) 37262 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916 chr1 135794912 135795319 + 0.318406410381916 NA Intergenic Intergenic -4306 NM_021467 21952 Mm.44379 NM_021467 ENSMUSG00000026418 Tnni1 2700018B22Rik|AI747285|ssTnI troponin I, skeletal, slow 1 protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-8 chr3 121892386 121892844 + 0.318406410381916 NA Intergenic Intergenic -60614 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-12 chr8 121630475 121630885 + 0.318406410381916 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 21253 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-3 chr7 29905905 29906415 + 0.318406410381916 NA promoter-TSS (NM_011754) promoter-TSS (NM_011754) -56 NM_001037707 22689 Mm.86747 NM_011754 ENSMUSG00000062040 Zfp27 Zfp-27|mkr-4|mszf76 zinc finger protein 27 protein-coding unique_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-2 chr8 44337285 44337800 + 0.318406410381916 NA Intergenic Intergenic -612666 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-2 chr11 116616594 116617098 + 0.318406410381916 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 7406 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-4 chr6 124904474 124904792 + 0.318406410381916 NA intron (NM_008479, intron 7 of 7) intron (NM_008479, intron 7 of 7) 7072 NM_008479 16768 Mm.4528 NM_008479 ENSMUSG00000030124 Lag3 CD223|LAG-3|Ly66 lymphocyte-activation gene 3 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916 chr1 74249711 74250304 + 0.318406410381916 NA intron (NM_001357387, intron 4 of 10) RSINE1|SINE|B4 13490 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding unique_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916 chr1 186582948 186583562 + 0.318406410381916 NA Intergenic Intergenic -24574 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916 chr10 68136207 68136534 + 0.318406410381916 NA intron (NM_023598, intron 4 of 9) intron (NM_023598, intron 4 of 9) 142356 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916 chr1 105433915 105434384 + 0.318406410381916 NA Intergenic Intergenic -77439 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-11 chr8 46551553 46551826 + 0.318406410381916 NA promoter-TSS (NM_027973) promoter-TSS (NM_027973) -380 NM_027973 71876 Mm.22108 NM_027973 ENSMUSG00000031629 Cenpu 1700029A22Rik|Mlf1ip centromere protein U protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-9 chr6 31075108 31075629 + 0.318406410381916 NA Intergenic Intergenic -12275 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-9 chr3 142359807 142360359 + 0.318406410381916 NA intron (NM_001190857, intron 1 of 7) intron (NM_001190857, intron 1 of 7) 31767 NM_022554 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-7 chr17 62882523 62883085 + 0.318406410381916 NA Intergenic CpG-6536 -1487 NM_010109 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-5 chr2 94178631 94178918 + 0.318406410381916 NA Intergenic Intergenic -20865 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-3 chr11 69323290 69323712 + 0.318406410381916 NA promoter-TSS (NM_001024206) promoter-TSS (NM_001024206) 372 NM_172560 216846 Mm.28774 NM_172560 ENSMUSG00000032782 Cntrob 9830165K03Rik|Lip8|Nip2 centrobin, centrosomal BRCA2 interacting protein protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-7 chr4 21776289 21776733 + 0.318406410381916 NA intron (NM_152825, intron 1 of 17) CpG 241 NM_152825 77593 Mm.154306 NM_152825 ENSMUSG00000040455 Usp45 3110003C05Rik|4930550B20Rik|AI843191|Gcap7 ubiquitin specific petidase 45 protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-3 chr11 102818661 102819124 + 0.318406410381916 NA intron (NM_001159383, intron 1 of 2) CpG 267 NM_001159382 14615 Mm.390369 NM_008122 ENSMUSG00000034520 Gjc1 C130009G16Rik|Cnx45|Cx45|Gja-7|Gja7 gap junction protein, gamma 1 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-2 chr11 30953623 30953967 + 0.318406410381916 NA promoter-TSS (NM_023906) promoter-TSS (NM_023906) 336 NM_025745 66753 Mm.294641 NM_025745 ENSMUSG00000020311 Erlec1 4933407N01Rik endoplasmic reticulum lectin 1 protein-coding common_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-2 chr3 57651469 57651929 + 0.318406410381916 NA promoter-TSS (NM_175095) promoter-TSS (NM_175095) -15 NM_175095 52245 Mm.21901 NM_175095 ENSMUSG00000036513 Commd2 1190017G07Rik|AI047739|D3Ertd176e|HSPC042 COMM domain containing 2 protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-2 chr1 184860731 184861243 + 0.318406410381916 NA Intergenic Intergenic -15140 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-8 chr3 135659559 135659897 + 0.318406410381916 NA intron (NM_008689, intron 4 of 24) intron (NM_008689, intron 4 of 24) 31819 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-4 chr13 110917340 110917979 + 0.318406410381916 NA Intergenic Intergenic -13813 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-6 chr14 30548007 30548409 + 0.318406410381916 NA promoter-TSS (NM_009388) promoter-TSS (NM_009388) -923 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-4 chr13 51764013 51764453 + 0.318406410381916 NA intron (NM_013660, intron 1 of 15) intron (NM_013660, intron 1 of 15) 29514 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-6 chr2 102765516 102765971 + 0.318406410381916 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -18983 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-2 chr11 75904692 75905100 + 0.318406410381916 NA intron (NM_001291159, intron 4 of 4) intron (NM_001291159, intron 4 of 4) 6163 NM_029548 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-7 chr2 112367588 112367898 + 0.318406410381916 NA intron (NM_026519, intron 1 of 4) CpG 284 NM_026519 68032 Mm.220942 NM_026519 ENSMUSG00000027131 Emc4 2610318K02Rik|Tmem85 ER membrane protein complex subunit 4 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-4 chr18 25510142 25510628 + 0.318406410381916 NA intron (NM_001362304, intron 3 of 12) intron (NM_001362304, intron 3 of 12) 169363 NM_001362337 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-3 chr17 33919686 33919950 + 0.318406410381916 NA TTS (NM_020625) TTS (NM_020625) 340 NM_009318 21356 Mm.154457 NM_009318 ENSMUSG00000024308 Tapbp D17Wsu91e|TPN TAP binding protein protein-coding unique_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-2 chr17 83706249 83706832 + 0.318406410381916 NA intron (NM_054082, intron 1 of 16) intron (NM_054082, intron 1 of 16) 377 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-9 chr8 24395847 24396257 + 0.318406410381916 NA Intergenic Intergenic 42894 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-11 chr7 126696279 126696779 + 0.318406410381916 NA promoter-TSS (NM_029420) promoter-TSS (NM_029420) 529 NM_175103 66162 Mm.358692 NM_175103 ENSMUSG00000047721 Bola2 1110025L05Rik|BolA-2 bolA-like 2 (E. coli) protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-10 chr9 105495297 105495659 + 0.318406410381916 NA promoter-TSS (NM_175025) promoter-TSS (NM_175025) -345 NM_001253836 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-5 chr15 98602471 98602773 + 0.318406410381916 NA intron (NM_007405, intron 2 of 21) intron (NM_007405, intron 2 of 21) 5011 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-11 chrX 105079791 105080334 + 0.318406410381916 NA intron (NM_001281871, intron 2 of 5) intron (NM_001281871, intron 2 of 5) 306 NM_026312 67683 Mm.273405 NM_026312 ENSMUSG00000031226 Pbdc1 2610029G23Rik polysaccharide biosynthesis domain containing 1 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-6 chr18 65726101 65726368 + 0.318406410381916 NA intron (NM_177028, intron 6 of 14) intron (NM_177028, intron 6 of 14) 27966 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-3 chr13 44733146 44733447 + 0.318406410381916 NA intron (NM_001205043, intron 1 of 17) intron (NM_001205043, intron 1 of 17) 2025 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-9 chr19 59589070 59589487 + 0.318406410381916 NA Intergenic Intergenic 96142 NR_045308 72647 Mm.410849 NR_045308 ENSMUSG00000100119 2700089I24Rik - RIKEN cDNA 2700089I24 gene ncRNA common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-8 chr19 24719924 24720338 + 0.318406410381916 NA intron (NM_175013, intron 9 of 10) intron (NM_175013, intron 9 of 10) 46123 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-4 chr7 132576046 132576338 + 0.318406410381916 NA intron (NM_016978, intron 1 of 9) CpG 206 NM_016978 18242 Mm.13694 NM_016978 ENSMUSG00000030934 Oat AI194874|rhg ornithine aminotransferase protein-coding common_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916 chr2 110186815 110187407 + 0.318406410381916 NA Intergenic Intergenic 118614 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-4 chr2 71541130 71541715 + 0.318406410381916 NA intron (NR_039557, intron 2 of 3).2 CpG -3531 NR_002854 111970 Mm.4543 NR_002854 Dlx1as Dix1as|Dlx1os distal-less homeobox 1, antisense ncRNA common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-2 chr11 8571511 8572025 + 0.318406410381916 NA intron (NM_001083587, intron 4 of 30) intron (NM_001083587, intron 4 of 30) 92767 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-5 chr18 36512961 36513292 + 0.318406410381916 NA intron (NM_010415, intron 2 of 5) intron (NM_010415, intron 2 of 5) 2679 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-4 chr2 32846821 32847208 + 0.318406410381916 NA intron (NM_001113569, intron 1 of 19) CpG 218 NM_009295 20910 Mm.278865 NM_009295 ENSMUSG00000026797 Stxbp1 AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1 syntaxin binding protein 1 protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-6 chr16 4726500 4726804 + 0.318406410381916 NA intron (NM_001136066, intron 1 of 5) CpG 291 NM_001136066 15369 Mm.272866 NM_010443 ENSMUSG00000004070 Hmox2 HO-2|HO2 heme oxygenase 2 protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-12 chrX 152016557 152016904 + 0.318406410381916 NA promoter-TSS (NM_025660) promoter-TSS (NM_025660) 302 NM_019710 24061 Mm.482095 NM_019710 ENSMUSG00000041133 Smc1a 5830426I24Rik|SMC-1A|Sb1.8|Smc1|Smc1alpha|Smc1l1|Smcb|mKIAA0178 structural maintenance of chromosomes 1A protein-coding common_peak1_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-3 chr10 80070229 80070631 + 0.318406410381916 NA intron (NM_001359635, intron 5 of 31) intron (NM_001359635, intron 5 of 31) 5009 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-6 chr2 83709215 83709586 + 0.318406410381916 NA Intergenic Intergenic -14997 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak1_30_24_0.0336483293513021_4.66068035445038_0.318406410381916 chr1 184060896 184061285 + 0.318406410381916 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 26709 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-7 chr3 97942149 97942526 + 0.318406410381916 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 12164 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-6 chr9 63959059 63959695 + 0.318406410381916 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 62682 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_28_26_-0.172919501212958_4.66842775155699_0.318406410381916-8 chr6 29431889 29432206 + 0.318406410381916 NA Intergenic Intergenic -1106 NM_001081185 68794 Mm.39046 NM_026839 ENSMUSG00000068699 Flnc 1110055E19Rik|ABP-280|ABPL|Fln2 filamin C, gamma protein-coding common_peak2_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-3 chr6 33249349 33249669 + 0.318406410381916 NA intron (NM_001347089, intron 1 of 9) intron (NM_001347089, intron 1 of 9) 381 NM_001347089 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding unique_peak1_31_24_0.0791288748698271_4.68342062720964_0.318406410381916-2 chr17 6173882 6174377 + 0.318406410381916 NA intron (NM_054040, intron 1 of 13) intron (NM_054040, intron 1 of 13) 35981 NM_054040 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_30_24_0.0336483293513021_4.66068035445038_0.318406410381916-10 chr5 21493929 21494324 + 0.318406410381916 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -49401 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_119_102_-0.0700779411305774_6.65146155661793_0.318402933244072 chr5 36396942 36398118 + 0.318402933244072 NA intron (NM_030889, intron 1 of 26) CpG 609 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak2_119_102_-0.0700779411305774_6.65146155661793_0.318402933244072 chr3 94886148 94887270 + 0.318402933244072 NA intron (NM_008945, intron 1 of 6) CpG 249 NM_008945 19172 Mm.368 NM_008945 ENSMUSG00000005779 Psmb4 Pros-27 proteasome (prosome, macropain) subunit, beta type 4 protein-coding common_peak1_124_98_0.0455441612533338_6.65212870070628_0.318402933244048 chr17 80754838 80756188 + 0.318402933244048 NA Intergenic Intergenic -27488 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_124_98_0.0455441612533338_6.65212870070628_0.318402933244048-2 chr17 84075054 84075900 + 0.318402933244048 NA Intergenic Intergenic -3183 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_194_154_0.0357963110157211_7.2940225607821_0.318374762218914 chr11 59226785 59228270 + 0.318374762218914 NA intron (NM_007476, intron 1 of 4) CpG 635 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding common_peak1_194_154_0.0357963110157211_7.2940225607821_0.318374762218914 chr6 113077580 113079122 + 0.318374762218914 NA intron (NM_028385, intron 1 of 21) intron (NM_028385, intron 1 of 21) 712 NM_028385 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak1_66_58_-0.101090031721454_5.83209803350111_0.318326940901209-3 chr17 25941450 25941938 + 0.318326940901209 NA TTS (NM_001039038) TTS (NM_001039038) 295 NM_001357592 14755 Mm.362054 NM_011822 ENSMUSG00000025728 Pigq Gpi1|Gpi1h|Gpi1p|Gpih phosphatidylinositol glycan anchor biosynthesis, class Q protein-coding common_peak2_70_55_0.0572658196491274_5.83598783188217_0.318326940901209-3 chr7 139212508 139213165 + 0.318326940901209 NA promoter-TSS (NM_027164) promoter-TSS (NM_027164) -152 NM_027164 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding common_peak1_66_58_-0.101090031721454_5.83209803350111_0.318326940901209-2 chr16 18247558 18248602 + 0.318326940901209 NA promoter-TSS (NM_001080999) promoter-TSS (NM_001080999) 614 NM_011239 19385 Mm.235287 NM_011239 ENSMUSG00000005732 Ranbp1 Htf9a RAN binding protein 1 protein-coding common_peak2_66_58_-0.101090031721454_5.83209803350111_0.318326940901209-2 chr7 58658418 58658905 + 0.318326940901209 NA exon (NM_009728, exon 1 of 21) exon (NM_009728, exon 1 of 21) 459 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_66_58_-0.101090031721454_5.83209803350111_0.318326940901209 chr6 34638005 34639390 + 0.318326940901209 NA intron (NM_001347100, intron 1 of 13) AT_rich|Low_complexity|Low_complexity 40193 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_70_55_0.0572658196491274_5.83598783188217_0.318326940901209-2 chr4 103119312 103119788 + 0.318326940901209 NA intron (NM_001039081, intron 1 of 12) CpG 160 NM_001039081 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak1_66_58_-0.101090031721454_5.83209803350111_0.318326940901209-4 chr5 92751908 92753064 + 0.318326940901209 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 36076 NR_035487 100316841 NR_035487 ENSMUSG00000089268 Mir1961 mmu-mir-1961 microRNA 1961 ncRNA common_peak1_70_55_0.0572658196491274_5.83598783188217_0.318326940901209-4 chr9 98296558 98297399 + 0.318326940901209 NA 5' UTR (NM_001357446, exon 1 of 4) 5' UTR (NM_001357446, exon 1 of 4) 408 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_70_55_0.0572658196491274_5.83598783188217_0.318326940901209-2 chr4 130112683 130113568 + 0.318326940901209 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 5569 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak1_70_55_0.0572658196491274_5.83598783188217_0.318326940901209 chr2 101678482 101679585 + 0.318326940901209 NA intron (NM_001303273, intron 1 of 6) intron (NM_001303273, intron 1 of 6) 613 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding common_peak1_70_55_0.0572658196491274_5.83598783188217_0.318326940901209-3 chr5 114772464 114773465 + 0.318326940901209 NA TTS (NR_027872) TTS (NR_027872) 527 NM_019834 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding common_peak1_66_58_-0.101090031721454_5.83209803350111_0.318326940901209 chr10 25272103 25272789 + 0.318326940901209 NA intron (NM_018747, intron 3 of 7) intron (NM_018747, intron 3 of 7) 26717 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak2_70_55_0.0572658196491274_5.83598783188217_0.318326940901209 chr13 36528146 36528974 + 0.318326940901209 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 205917 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak2_195_155_0.0338459653573171_7.30232520154091_0.31826462743701 chr12 3308419 3309942 + 0.31826462743701 NA intron (NM_016676, intron 1 of 5) intron (NM_016676, intron 1 of 5) 789 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_120_103_-0.0721289571647672_6.66437523955871_0.318230901360335 chr17 24414707 24415459 + 0.318230901360335 NA promoter-TSS (NR_033554) promoter-TSS (NR_033554) 408 NM_001080128 19826 Mm.1951 NM_009070 ENSMUSG00000034681 Rnps1 - ribonucleic acid binding protein S1 protein-coding common_peak1_125_99_0.0424591288988667_6.66508575422416_0.31823090136031 chr18 10181280 10182115 + 0.31823090136031 NA promoter-TSS (NM_009071) promoter-TSS (NM_009071) 95 NM_009071 19877 Mm.6710 NM_009071 ENSMUSG00000024290 Rock1 1110055K06Rik|Rock-I Rho-associated coiled-coil containing protein kinase 1 protein-coding common_peak2_196_156_0.0319176131830483_7.31057955548315_0.318155882542721 chr1 181210866 181212639 + 0.318155882542721 NA 5' UTR (NM_145514, exon 1 of 14) 5' UTR (NM_145514, exon 1 of 14) 226 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_196_156_0.0319176131830483_7.31057955548315_0.318155882542721-2 chr8 4237937 4239865 + 0.318155882542721 NA 5' UTR (NM_001164172, exon 1 of 12) 5' UTR (NM_001164172, exon 1 of 12) 161 NM_001164172 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak1_126_100_0.0394281388221209_6.67792555216286_0.318062243305998 chr3 65973837 65975511 + 0.318062243305998 NA Intergenic CpG -16425 NM_001355432 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak2_71_56_0.0517662549347193_5.8587731416321_0.318026055590229-2 chr5 100429735 100430439 + 0.318026055590229 NA promoter-TSS (NR_034038) promoter-TSS (NR_034038) -552 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA common_peak1_71_56_0.0517662549347193_5.8587731416321_0.318026055590229 chr2 170244815 170245945 + 0.318026055590229 NA Intergenic (TCC)n|Simple_repeat|Simple_repeat -102705 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_71_56_0.0517662549347193_5.8587731416321_0.318026055590229 chr3 87985088 87985583 + 0.318026055590229 NA Intergenic Intergenic 14242 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak1_71_56_0.0517662549347193_5.8587731416321_0.318026055590229-2 chr3 145633194 145633767 + 0.318026055590229 NA Intergenic Intergenic 16505 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_67_59_-0.104114717845311_5.85483323668586_0.318026055590216 chr6 34713552 34714190 + 0.318026055590216 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 4427 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_67_59_-0.104114717845311_5.85483323668586_0.318026055590216 chr6 30047349 30047983 + 0.318026055590216 NA promoter-TSS (NM_010938) promoter-TSS (NM_010938) -322 NM_001164228 18181 Mm.259258 NM_010938 ENSMUSG00000058440 Nrf1 C87038|D6Ertd415e nuclear respiratory factor 1 protein-coding common_peak1_193_163_-0.0529964297802499_7.33105378972796_0.31794245848188 chr19 8740342 8742546 + 0.31794245848188 NA promoter-TSS (NM_001167799) promoter-TSS (NM_001167799) 20 NM_001167799 56389 Mm.153061 NM_019829 ENSMUSG00000010110 Stx5a 0610031F24Rik|D19Ertd627e|Stx5 syntaxin 5A protein-coding common_peak1_123_105_-0.0645258945836611_6.69565750727137_0.317896860788834-3 chr9 50751351 50752758 + 0.317896860788834 NA promoter-TSS (NM_001289784) promoter-TSS (NM_001289784) 300 NM_001164708 69253 Mm.1980 NM_024441 ENSMUSG00000038086 Hspb2 27kDa|2810021G24Rik|HSP27|MKBP heat shock protein 2 protein-coding common_peak2_122_105_-0.0761252847353058_6.68985781219555_0.317896860788834 chr16 87699001 87699907 + 0.317896860788834 NA intron (NM_007520, intron 1 of 4) CpG 500 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_123_105_-0.0645258945836611_6.69565750727137_0.317896860788834 chr12 8674360 8675868 + 0.317896860788834 NA intron (NM_030723, intron 1 of 20) intron (NM_030723, intron 1 of 20) 433 NM_030723 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak1_123_105_-0.0645258945836611_6.69565750727137_0.317896860788834-2 chr13 14039386 14040375 + 0.317896860788834 NA promoter-TSS (NR_130788) promoter-TSS (NR_130788) -242 NM_178337 70430 Mm.260209 NM_178337 ENSMUSG00000039233 Tbce 2610206D02Rik|C530005D02Rik|pmn tubulin-specific chaperone E protein-coding common_peak2_122_105_-0.0761252847353058_6.68985781219555_0.317896860788834-2 chrX 74245094 74246359 + 0.317896860788834 NA intron (NM_001290421, intron 1 of 46) intron (NM_001290421, intron 1 of 46) 808 NM_010227 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak1_122_105_-0.0761252847353058_6.68985781219555_0.317896860788834 chr4 126130799 126131876 + 0.317896860788834 NA intron (NM_028800, intron 6 of 10) intron (NM_028800, intron 6 of 10) -16666 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak2_194_164_-0.0544014979558574_7.33912146526789_0.317837728957932 chr8 32007510 32009428 + 0.317837728957932 NA Intergenic CpG -90266 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_200_159_0.0334055454072359_7.33863086759098_0.317837728957882 chr16 92695160 92696816 + 0.317837728957882 NA 5' UTR (NM_009821, exon 1 of 5) 5' UTR (NM_009821, exon 1 of 5) 1341 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047 chr8 71463254 71463588 + 0.317737750275047 NA intron (NM_022419, intron 1 of 4) CpG 236 NM_022419 64296 Mm.276383 NM_022419 ENSMUSG00000007950 Abhd8 0910001L24Rik|AB030191 abhydrolase domain containing 8 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-10 chr6 118419552 118419864 + 0.317737750275047 NA promoter-TSS (NM_194339) promoter-TSS (NM_194339) -291 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding unique_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047 chr8 11372944 11373395 + 0.317737750275047 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -60343 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-11 chr7 28179576 28179829 + 0.317737750275047 NA promoter-TSS (NM_001271370) promoter-TSS (NM_001271370) 219 NM_010092 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-13 chr8 61755038 61755306 + 0.317737750275047 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 4926 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-8 chr2 137653682 137654233 + 0.317737750275047 NA Intergenic Intergenic -537437 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-3 chr14 121245183 121245702 + 0.317737750275047 NA intron (NM_134082, intron 13 of 26) intron (NM_134082, intron 13 of 26) -3264 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-15 chr8 45581163 45581423 + 0.317737750275047 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -46458 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047 chr1 89124473 89124817 + 0.317737750275047 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 54230 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047 chr1 91057250 91057688 + 0.317737750275047 NA intron (NM_008515, intron 1 of 22) intron (NM_008515, intron 1 of 22) 4025 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-4 chr12 108307872 108308370 + 0.317737750275047 NA intron (NM_001044380, intron 1 of 8) intron (NM_001044380, intron 1 of 8) 1851 NM_001044380 214305 Mm.36423 NM_001044380 ENSMUSG00000021260 Hhipl1 1600002O04Rik|AK129450|mKIAA1822 hedgehog interacting protein-like 1 protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-8 chr8 61755086 61755293 + 0.317737750275047 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 4909 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-9 chr3 49685866 49686164 + 0.317737750275047 NA Intergenic Intergenic 71301 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-6 chr15 99703151 99703405 + 0.317737750275047 NA exon (NM_031842, exon 2 of 13) exon (NM_031842, exon 2 of 13) 991 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-10 chr4 156130622 156130945 + 0.317737750275047 NA 5' UTR (NM_001220499, exon 1 of 2) 5' UTR (NM_001220499, exon 1 of 2) 3295 NM_001220499 100045778 NM_001220499 ENSMUSG00000110404 Rnf223 9930005F22Rik ring finger 223 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-12 chr8 34277210 34277628 + 0.317737750275047 NA Intergenic Intergenic -110707 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-3 chr12 52604618 52604826 + 0.317737750275047 NA Intergenic Intergenic -2400 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-16 chr9 65579517 65580031 + 0.317737750275047 NA intron (NM_153119, intron 1 of 5) intron (NM_153119, intron 1 of 5) 313 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-5 chr15 73267991 73268296 + 0.317737750275047 NA intron (NM_001358046, intron 19 of 34) intron (NM_001358046, intron 19 of 34) -13261 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-8 chr19 40487033 40487545 + 0.317737750275047 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 26447 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047 chr10 62920757 62921104 + 0.317737750275047 NA intron (NM_175194, intron 1 of 8) CpG 297 NM_175194 73132 Mm.37457 NM_175194 ENSMUSG00000071253 Slc25a16 3110021G18Rik|GDA|GDC|HGT.1|ML7 solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-2 chr11 74830520 74830791 + 0.317737750275047 NA promoter-TSS (NM_010813) promoter-TSS (NM_010813) -269 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-17 chr9 106198808 106199463 + 0.317737750275047 NA promoter-TSS (NM_026447) promoter-TSS (NM_026447) 98 NM_026447 67905 Mm.23018 NM_026447 ENSMUSG00000020253 Ppm1m 2810423O19Rik|AW610647|C77250|PP2Ceta protein phosphatase 1M protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-3 chr11 35934618 35935016 + 0.317737750275047 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 45272 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-5 chr17 46645589 46646014 + 0.317737750275047 NA promoter-TSS (NM_001316742) promoter-TSS (NM_001316742) 279 NM_001357130 74764 Mm.279599 NM_029091 ENSMUSG00000003546 Klc4 1200014P03Rik|AA408085|AW146303|Knsl8 kinesin light chain 4 protein-coding unique_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-4 chr5 122299635 122299986 + 0.317737750275047 NA intron (NM_177242, intron 1 of 5) intron (NM_177242, intron 1 of 5) 15412 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-13 chr6 72958047 72958308 + 0.317737750275047 NA promoter-TSS (NM_001039392) promoter-TSS (NM_001039392) 55 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-15 chr9 103073512 103073894 + 0.317737750275047 NA intron (NM_033314, intron 8 of 13) intron (NM_033314, intron 8 of 13) -38371 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047 chr11 54859980 54860561 + 0.317737750275047 NA intron (NM_029327, intron 1 of 4) intron (NM_029327, intron 1 of 4) 321 NM_029327 75530 Mm.83578 NM_029327 ENSMUSG00000020268 Lyrm7 1700024C24Rik|9330147L21Rik LYR motif containing 7 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-3 chr11 95713029 95713297 + 0.317737750275047 NA promoter-TSS (NR_045780) promoter-TSS (NR_045780) -409 NR_045780 432396 Mm.426849 NR_045780 ENSMUSG00000086191 Zfp652os 1110035M17Rik zinc finger protein 652, opposite strand ncRNA common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-6 chr17 78444465 78444844 + 0.317737750275047 NA Intergenic Intergenic -26502 NM_001285940 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-7 chr2 36048911 36049351 + 0.317737750275047 NA promoter-TSS (NM_029309) promoter-TSS (NM_029309) 161 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-4 chr14 20885327 20885862 + 0.317737750275047 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -43804 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-12 chr9 47702919 47703407 + 0.317737750275047 NA intron (NM_001025600, intron 1 of 8) intron (NM_001025600, intron 1 of 8) 115045 NR_046048 100038460 Mm.447649 NR_046048 Gm10677 - predicted gene 10677 ncRNA common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-16 chr9 121277310 121277675 + 0.317737750275047 NA promoter-TSS (NM_177589) promoter-TSS (NM_177589) -320 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-14 chr9 62372367 62372920 + 0.317737750275047 NA intron (NM_009672, intron 3 of 6) intron (NM_009672, intron 3 of 6) 31300 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-2 chr11 78399152 78399664 + 0.317737750275047 NA intron (NM_022411, intron 9 of 11) intron (NM_022411, intron 9 of 11) 4923 NR_003282 790911 Mm.457257 NR_003282 ENSMUSG00000085747 Slc13a2os Gm11194 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand ncRNA unique_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-2 chr14 50896955 50897590 + 0.317737750275047 NA Intergenic Intergenic -4017 NM_001166651 546611 Mm.390692 NM_001166651 ENSMUSG00000090799 Klhl33 EG546611 kelch-like 33 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-9 chr2 143914445 143914800 + 0.317737750275047 NA promoter-TSS (NM_019771) promoter-TSS (NM_019771) -709 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-14 chr7 97400080 97400446 + 0.317737750275047 NA exon (NM_024220, exon 1 of 3) exon (NM_024220, exon 1 of 3) 260 NM_024220 68197 Mm.334031 NM_024220 ENSMUSG00000030647 Ndufc2 1810004I06Rik|2010300P09Rik|G1|R75094 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-10 chr2 163345375 163345690 + 0.317737750275047 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 52441 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-4 chr16 91762763 91763127 + 0.317737750275047 NA intron (NM_001110276, intron 1 of 15) intron (NM_001110276, intron 1 of 15) 33574 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-4 chr12 56345377 56345802 + 0.317737750275047 NA intron (NM_145442, intron 1 of 8) CpG 305 NM_145442 217588 Mm.25656 NM_145442 ENSMUSG00000021028 Mbip 4933408E06Rik MAP3K12 binding inhibitory protein 1 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-11 chr3 41321346 41321644 + 0.317737750275047 NA Intergenic Intergenic 171704 NR_040385 78706 Mm.366094 NR_040385 ENSMUSG00000097639 Platr4 C430002E04Rik pluripotency associated transcript 4 ncRNA common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047 chr10 23176541 23176962 + 0.317737750275047 NA intron (NM_010167, intron 3 of 18) intron (NM_010167, intron 3 of 18) 173139 NM_001347372 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-5 chr18 49755331 49755632 + 0.317737750275047 NA exon (NM_001170960, exon 1 of 4) exon (NM_001170960, exon 1 of 4) 120 NM_001170960 68857 Mm.96010 NM_026854 ENSMUSG00000024505 Dtwd2 1190002H09Rik|8030470C17Rik|AI414673|BB115449 DTW domain containing 2 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-11 chr7 130673749 130674373 + 0.317737750275047 NA intron (NM_206856, intron 3 of 20) intron (NM_206856, intron 3 of 20) -18495 NM_001347637 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-2 chr1 168430103 168430645 + 0.317737750275047 NA intron (NM_183355, intron 1 of 8) intron (NM_183355, intron 1 of 8) 1795 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-12 chr3 84814013 84814318 + 0.317737750275047 NA Intergenic CpG -1412 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-8 chr2 69647265 69647953 + 0.317737750275047 NA intron (NM_028284, intron 1 of 11) intron (NM_028284, intron 1 of 11) 354 NM_028284 72569 Mm.252136 NM_028284 ENSMUSG00000063145 Bbs5 1700049I01Rik|2700023J09Rik Bardet-Biedl syndrome 5 (human) protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-7 chr8 31112559 31112957 + 0.317737750275047 NA intron (NM_175136, intron 1 of 5) intron (NM_175136, intron 1 of 5) 912 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak2_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-7 chr18 83827181 83827527 + 0.317737750275047 NA Intergenic Intergenic 259208 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-3 chr11 48820113 48820463 + 0.317737750275047 NA Intergenic Intergenic -2897 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak1_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-6 chr8 4226964 4227340 + 0.317737750275047 NA intron (NM_028175, intron 1 of 2) intron (NM_028175, intron 1 of 2) 325 NM_028175 72267 Mm.25479 NM_028175 ENSMUSG00000046589 Lrrc8e 1810049O03Rik|C87354 leucine rich repeat containing 8 family, member E protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-5 chr15 64361966 64362386 + 0.317737750275047 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 20743 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-6 chr17 33824663 33824875 + 0.317737750275047 NA promoter-TSS (NM_001355384) promoter-TSS (NM_001355384) 124 NR_103514 66416 Mm.29513 NM_023202 ENSMUSG00000041881 Ndufa7 14.5kDa|2400007M02Rik|CI-B14.5a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a) protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-2 chr10 77212096 77212422 + 0.317737750275047 NA Intergenic Intergenic -45729 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_32_25_0.0666262662566668_4.73375285126943_0.317737750275047-7 chr19 16780653 16780930 + 0.317737750275047 NA 5' UTR (NM_173028, exon 1 of 72) 5' UTR (NM_173028, exon 1 of 72) 142 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_29_27_-0.176822376858475_4.71894373362837_0.317737750275047-9 chr4 64083620 64083955 + 0.317737750275047 NA Intergenic Intergenic -36772 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding common_peak1_69_60_-0.0864363245903279_5.88751917526772_0.317735460399505-3 chr8 3493122 3493702 + 0.317735460399505 NA intron (NM_080461, intron 1 of 1) CpG 274 NM_080461 140482 Mm.299073 NM_080461 ENSMUSG00000047264 Zfp358 Zfend zinc finger protein 358 protein-coding common_peak1_69_60_-0.0864363245903279_5.88751917526772_0.317735460399505-2 chr16 91647879 91648686 + 0.317735460399505 NA intron (NM_019973, intron 1 of 4) CpG-5863 458 NM_178880 20658 Mm.46401 NM_019973 ENSMUSG00000022961 Son 2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp Son DNA binding protein protein-coding common_peak1_68_60_-0.107048433539178_5.8772131207933_0.317735460399505-3 chr17 69383194 69384031 + 0.317735460399505 NA promoter-TSS (NM_009547) promoter-TSS (NM_009547) -192 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding common_peak1_68_60_-0.107048433539178_5.8772131207933_0.317735460399505-6 chr8 113635496 113636333 + 0.317735460399505 NA 5' UTR (NM_173015, exon 1 of 5) 5' UTR (NM_173015, exon 1 of 5) 115 NM_173015 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak2_68_60_-0.107048433539178_5.8772131207933_0.317735460399505 chr8 113635517 113636327 + 0.317735460399505 NA 5' UTR (NM_173015, exon 1 of 5) 5' UTR (NM_173015, exon 1 of 5) 123 NM_173015 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak2_69_60_-0.0864363245903279_5.88751917526772_0.317735460399505 chr4 118409010 118409804 + 0.317735460399505 NA promoter-TSS (NM_020000) promoter-TSS (NM_020000) 70 NM_020000 80509 Mm.259567 NM_020000 ENSMUSG00000006392 Med8 2210021A15Rik|AB041805|ARC32 mediator complex subunit 8 protein-coding common_peak1_68_60_-0.107048433539178_5.8772131207933_0.317735460399505-5 chr6 72344488 72345122 + 0.317735460399505 NA intron (NM_138592, intron 1 of 12) intron (NM_138592, intron 1 of 12) 370 NM_138592 28035 Mm.281900 NM_138592 ENSMUSG00000056305 Usp39 AA408960|AI894154|CGI-21|D6Wsu157e|SAD1 ubiquitin specific peptidase 39 protein-coding common_peak1_68_60_-0.107048433539178_5.8772131207933_0.317735460399505 chr1 105431039 105431888 + 0.317735460399505 NA Intergenic ID_B1|SINE|B4 -74753 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_68_60_-0.107048433539178_5.8772131207933_0.317735460399505-2 chr12 69197304 69198252 + 0.317735460399505 NA non-coding (NR_033222, exon 2 of 2) non-coding (NR_033222, exon 2 of 2) 567 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA common_peak1_69_60_-0.0864363245903279_5.88751917526772_0.317735460399505-4 chr9 34995093 34995998 + 0.317735460399505 NA intron (NM_001190912, intron 4 of 15) intron (NM_001190912, intron 4 of 15) -121183 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_69_60_-0.0864363245903279_5.88751917526772_0.317735460399505 chr10 24447475 24448104 + 0.317735460399505 NA Intergenic Intergenic -147653 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_68_60_-0.107048433539178_5.8772131207933_0.317735460399505-4 chr5 121452634 121453170 + 0.317735460399505 NA promoter-TSS (NM_026129) promoter-TSS (NM_026129) 193 NM_029912 77462 Mm.358781 NM_029912 ENSMUSG00000029452 Tmem116 4930406A18Rik|4930513P12Rik|C030022K24Rik transmembrane protein 116 protein-coding common_peak1_72_57_0.0464344404383548_5.88119821534675_0.31773546039948-3 chr8 80856687 80857436 + 0.31773546039948 NA intron (NM_021356, intron 1 of 9) intron (NM_021356, intron 1 of 9) 23418 NM_021356 14388 Mm.277409 NM_021356 ENSMUSG00000031714 Gab1 AA408973|AW107238 growth factor receptor bound protein 2-associated protein 1 protein-coding common_peak2_72_57_0.0464344404383548_5.88119821534675_0.31773546039948 chr11 85311385 85312113 + 0.31773546039948 NA exon (NM_016910, exon 1 of 6) exon (NM_016910, exon 1 of 6) 495 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak1_72_57_0.0464344404383548_5.88119821534675_0.31773546039948-2 chr7 67371584 67372453 + 0.31773546039948 NA intron (NM_001357324, intron 1 of 11) intron (NM_001357324, intron 1 of 11) 840 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak2_72_57_0.0464344404383548_5.88119821534675_0.31773546039948-3 chr8 119344644 119345297 + 0.31773546039948 NA exon (NM_024219, exon 2 of 4) exon (NM_024219, exon 2 of 4) 432 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 protein-coding common_peak2_72_57_0.0464344404383548_5.88119821534675_0.31773546039948-2 chr13 51976251 51977077 + 0.31773546039948 NA Intergenic Intergenic -120077 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak1_72_57_0.0464344404383548_5.88119821534675_0.31773546039948 chr16 85147713 85148669 + 0.31773546039948 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 25516 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak2_129_102_0.0445845868792851_6.70879282062286_0.317734659298888-2 chr19 14596849 14598015 + 0.317734659298888 NA promoter-TSS (NM_001302951) promoter-TSS (NM_001302951) -219 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_129_102_0.0445845868792851_6.70879282062286_0.317734659298888 chr19 38836658 38837743 + 0.317734659298888 NA exon (NM_001362424, exon 1 of 11) exon (NM_001362424, exon 1 of 11) 621 NM_001362424 209478 Mm.391153 NM_145952 ENSMUSG00000048720 Tbc1d12 BC033574 TBC1D12: TBC1 domain family, member 12 protein-coding common_peak2_129_102_0.0445845868792851_6.70879282062286_0.317734659298888-3 chr7 16404779 16406592 + 0.317734659298888 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 4489 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_129_102_0.0445845868792851_6.70879282062286_0.317734659298888 chr10 81176695 81177764 + 0.317734659298888 NA intron (NM_007907, intron 1 of 13) intron (NM_007907, intron 1 of 13) 598 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak2_124_106_-0.0665662050682032_6.70818388386705_0.317734659298839 chr5 65696972 65697896 + 0.317734659298839 NA intron (NM_001081321, intron 1 of 31) CpG-11111 422 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak2_195_165_-0.0557912471273587_7.34714380778325_0.317734288566159 chr15 101283553 101285096 + 0.317734288566159 NA promoter-TSS (NM_026566) promoter-TSS (NM_026566) 23 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding common_peak1_197_166_-0.0499126649953263_7.35874795997639_0.317632113649305 chr14 31250221 31252127 + 0.317632113649305 NA promoter-TSS (NM_027088) promoter-TSS (NM_027088) 141 NM_001360625 71838 Mm.5348 NM_027949 ENSMUSG00000021902 Phf7 1700006H01Rik|1700010P14Rik|AI427892|AW555949 PHD finger protein 7 protein-coding common_peak1_130_103_0.0416225903012988_6.72125101329174_0.317575547927179 chr8 104382841 104384005 + 0.317575547927179 NA intron (NM_153582, intron 1 of 3) intron (NM_153582, intron 1 of 3) 12384 NM_153582 97487 Mm.29658 NM_153582 ENSMUSG00000096188 Cmtm4 Cklfsf4|D19397|Gm9853 CKLF-like MARVEL transmembrane domain containing 4 protein-coding common_peak2_70_61_-0.0895755686801438_5.9094085260468_0.317454636273734-3 chr9 119894931 119895508 + 0.317454636273734 NA intron (NM_026236, intron 1 of 18) CpG 324 NM_026236 67561 Mm.104789 NM_026236 ENSMUSG00000032512 Wdr48 8430408H12Rik|Uaf1|mKIAA1449 WD repeat domain 48 protein-coding common_peak1_70_61_-0.0895755686801438_5.9094085260468_0.317454636273734-2 chr8 126829258 126830349 + 0.317454636273734 NA Intergenic Intergenic -19217 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_70_61_-0.0895755686801438_5.9094085260468_0.317454636273734-2 chr15 83441161 83442005 + 0.317454636273734 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 6297 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_70_61_-0.0895755686801438_5.9094085260468_0.317454636273734 chr1 39556452 39557514 + 0.317454636273734 NA intron (NM_001033135, intron 5 of 6) intron (NM_001033135, intron 5 of 6) -8143 NR_028555 100217461 NR_028555 ENSMUSG00000077704 Snord89 MBII-289 small nucleolar RNA, C/D box 89 snoRNA common_peak2_70_61_-0.0895755686801438_5.9094085260468_0.317454636273734 chr13 97240288 97240917 + 0.317454636273734 NA promoter-TSS (NM_007930) promoter-TSS (NM_007930) -503 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak2_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-4 chr8 121955363 121956796 + 0.317454636273721 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 5587 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-3 chr5 148928373 148929056 + 0.317454636273721 NA promoter-TSS (NM_153572) promoter-TSS (NM_153572) -67 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-2 chr16 43361361 43362748 + 0.317454636273721 NA intron (NM_181058, intron 2 of 6) intron (NM_181058, intron 2 of 6) 58142 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak1_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-5 chr8 129234180 129235031 + 0.317454636273721 NA promoter-TSS (NM_153780) promoter-TSS (NM_153780) -559 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding common_peak1_73_58_0.0412627121223563_5.90327440542302_0.317454636273721 chr10 77581831 77582704 + 0.317454636273721 NA intron (NM_145925, intron 1 of 5) intron (NM_145925, intron 1 of 5) 612 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding common_peak1_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-2 chr5 138155079 138155728 + 0.317454636273721 NA intron (NM_019747, intron 1 of 4) CpG 341 NM_019747 56314 Mm.19274 NM_019747 ENSMUSG00000037007 Zfp113 4732456B05Rik|mKIAA4229 zinc finger protein 113 protein-coding common_peak2_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-3 chr3 88770855 88771768 + 0.317454636273721 NA intron (NM_018804, intron 1 of 3) intron (NM_018804, intron 1 of 3) 1288 NM_018804 229521 Mm.379376 NM_018804 ENSMUSG00000068923 Syt11 1500004A13Rik|3632445O20Rik|5430404N14Rik|6530420C11Rik|AI851970 synaptotagmin XI protein-coding common_peak1_73_58_0.0412627121223563_5.90327440542302_0.317454636273721-4 chr6 72347350 72348114 + 0.317454636273721 NA intron (NM_026696, intron 2 of 3) GC_rich|Low_complexity|Low_complexity 415 NM_026696 68364 Mm.52711 NM_026696 ENSMUSG00000058706 0610030E20Rik 1500031N04Rik|2810411C16Rik|AI461894 RIKEN cDNA 0610030E20 gene protein-coding common_peak2_73_58_0.0412627121223563_5.90327440542302_0.317454636273721 chr16 20651679 20652548 + 0.317454636273721 NA intron (NM_134101, intron 1 of 20) intron (NM_134101, intron 1 of 20) 461 NM_134101 21762 Mm.243234 NM_134101 ENSMUSG00000006998 Psmd2 9430095H01Rik|AA407121|TEG-190|Tex190 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding common_peak1_131_104_0.0387105075851473_6.7336007714587_0.317419439196462 chr7 109519218 109520255 + 0.317419439196462 NA promoter-TSS (NR_028079) promoter-TSS (NR_028079) -396 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_131_104_0.0387105075851473_6.7336007714587_0.317419439196462 chr1 93444197 93445892 + 0.317419439196462 NA intron (NM_133808, intron 1 of 27) CpG 657 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_297_236_0.030699168053764_7.90409283292514_0.317384610663572 chr17 17826537 17828610 + 0.317384610663572 NA Intergenic Intergenic -2615 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA common_peak2_127_109_-0.0724846080265964_6.74511740951136_0.317266248900613 chr10 93888677 93889721 + 0.317266248900613 NA intron (NM_019648, intron 2 of 11) CpG 2003 NM_019648 56307 Mm.289329 NM_019648 ENSMUSG00000036112 Metap2 4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2 methionine aminopeptidase 2 protein-coding common_peak2_128_109_-0.061336560661017_6.75069143319415_0.317266248900613 chr13 40731178 40732727 + 0.317266248900613 NA intron (NM_001301674, intron 2 of 7) intron (NM_001301674, intron 2 of 7) -1495 NM_001122948 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak2_128_109_-0.061336560661017_6.75069143319415_0.317266248900613-3 chr9 14379416 14380996 + 0.317266248900613 NA intron (NM_028013, intron 1 of 1) intron (NM_028013, intron 1 of 1) 1036 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak2_128_109_-0.061336560661017_6.75069143319415_0.317266248900613-2 chr5 41707296 41708470 + 0.317266248900613 NA promoter-TSS (NM_001310592) promoter-TSS (NM_001310592) -192 NM_001310592 100972 Mm.41555 NM_027295 ENSMUSG00000029128 Rab28 2700023P08Rik|AW496496 RAB28, member RAS oncogene family protein-coding common_peak1_128_109_-0.061336560661017_6.75069143319415_0.317266248900613 chr8 36639097 36640463 + 0.317266248900613 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -25837 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_132_105_0.0358470699828342_6.74584398955462_0.317266248900588 chr19 11818173 11819732 + 0.317266248900588 NA non-coding (NR_153434, exon 1 of 12) non-coding (NR_153434, exon 1 of 12) 451 NM_001286543 20908 Mm.272264 NM_011502 ENSMUSG00000041488 Stx3 Syn-3 syntaxin 3 protein-coding common_peak1_132_105_0.0358470699828342_6.74584398955462_0.317266248900588 chr5 113771207 113772209 + 0.317266248900588 NA non-coding (NR_151532, exon 1 of 17) non-coding (NR_151532, exon 1 of 17) 692 NR_151532 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding common_peak2_132_105_0.0358470699828342_6.74584398955462_0.317266248900588-2 chr5 125244111 125245733 + 0.317266248900588 NA Intergenic Intergenic -65708 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_299_238_0.028157697252527_7.91494565660701_0.317248880677388 chr11 53299167 53301515 + 0.317248880677388 NA 5' UTR (NM_008300, exon 1 of 19) 5' UTR (NM_008300, exon 1 of 19) 138 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak2_299_238_0.028157697252527_7.91494565660701_0.317248880677388-2 chr3 87982448 87984629 + 0.317248880677388 NA Intergenic Intergenic 12445 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak1_202_170_-0.048335423507746_7.39368480313203_0.317235615355678 chr6 89343927 89346149 + 0.317235615355678 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 17575 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_208_165_0.0362044020042429_7.39314163234905_0.317235615355629 chr13 16011018 16013401 + 0.317235615355629 NA 5' UTR (NM_008380, exon 2 of 5) 5' UTR (NM_008380, exon 2 of 5) 358 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_71_62_-0.0926236544004562_5.93096809629969_0.317183098493489-2 chr19 8735613 8736359 + 0.317183098493489 NA intron (NM_134139, intron 1 of 10) CpG 147 NM_134139 107071 Mm.29627 NM_134139 ENSMUSG00000042729 Wdr74 5730436H21Rik|AA407588 WD repeat domain 74 protein-coding common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489-7 chr8 47673518 47674500 + 0.317183098493489 NA intron (NM_023503, intron 1 of 1) CpG 1150 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak2_71_62_-0.0926236544004562_5.93096809629969_0.317183098493489 chr19 29047464 29048101 + 0.317183098493489 NA non-coding (NR_028360, exon 1 of 1) non-coding (NR_028360, exon 1 of 1) 120 NM_021299 56248 Mm.196067 NM_021299 ENSMUSG00000024782 Ak3 AA407498|AI506714|AK-3|Ak3l|Ak3l1|Akl3l adenylate kinase 3 protein-coding common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489-4 chr2 26445668 26446469 + 0.317183098493489 NA promoter-TSS (NM_153125) promoter-TSS (NM_153125) 144 NR_152207 100125929 Mm.392411 NR_152207 0610009E02Rik - RIKEN cDNA 0610009E02 gene ncRNA common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489 chr1 153486968 153487637 + 0.317183098493489 NA intron (NM_007842, intron 1 of 27) CpG 358 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding common_peak2_75_59_0.0552178793633837_5.93449953529021_0.317183098493489-2 chr8 129234153 129235022 + 0.317183098493489 NA promoter-TSS (NM_153780) promoter-TSS (NM_153780) -541 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489-6 chr4 86748692 86749212 + 0.317183098493489 NA intron (NM_184088, intron 1 of 31) CpG 397 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_75_59_0.0552178793633837_5.93449953529021_0.317183098493489 chr10 97094186 97095366 + 0.317183098493489 NA Intergenic Intergenic 59008 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489-2 chr11 117076409 117077393 + 0.317183098493489 NA promoter-TSS (NR_105853) promoter-TSS (NR_105853) 118 NR_027059 76972 Mm.309167 NR_027059 ENSMUSG00000086859 Snhg20 2810008D09Rik small nucleolar RNA host gene 20 ncRNA common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489-3 chr11 120484343 120485385 + 0.317183098493489 NA TTS (NM_008244) TTS (NM_008244) 227 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding common_peak1_74_59_0.0362438687712441_5.92501252999414_0.317183098493489-5 chr2 27739815 27741013 + 0.317183098493489 NA intron (NM_001290481, intron 2 of 9) intron (NM_001290481, intron 2 of 9) 29831 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_71_62_-0.0926236544004562_5.93096809629969_0.317183098493489 chr10 86270719 86271688 + 0.317183098493489 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -29209 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak2_75_59_0.0552178793633837_5.93449953529021_0.317183098493489 chr13 104287498 104288667 + 0.317183098493489 NA intron (NR_136938, intron 1 of 26) intron (NR_136938, intron 1 of 26) 247 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_301_239_0.0316523290752757_7.92271676014616_0.317181857050649 chr15 12117207 12118968 + 0.317181857050649 NA intron (NM_001358823, intron 1 of 18) CpG 236 NM_001358823 22763 Mm.273496 NM_011767 ENSMUSG00000022201 Zfr C920030H05Rik zinc finger RNA binding protein protein-coding common_peak1_209_166_0.0343773431527179_7.40089296405041_0.317139432492098 chr10 60353674 60355631 + 0.317139432492098 NA intron (NM_028732, intron 1 of 6) B3|SINE|B2 7801 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-7 chr3 123334777 123335390 + 0.317118655902079 NA intron (NM_027135, intron 10 of 22) intron (NM_027135, intron 10 of 22) 50907 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-4 chr16 45873798 45874407 + 0.317118655902079 NA Intergenic Intergenic -29351 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-8 chr5 121619093 121619514 + 0.317118655902079 NA promoter-TSS (NM_178799) promoter-TSS (NM_178799) -365 NM_178799 338350 Mm.482918 NM_178799 ENSMUSG00000042647 Acad12 9330129D05Rik acyl-Coenzyme A dehydrogenase family, member 12 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-10 chr5 135711078 135712087 + 0.317118655902079 NA intron (NM_008898, intron 1 of 15) B1_Mus2|SINE|Alu 22437 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-5 chr13 98026841 98027312 + 0.317118655902079 NA intron (NM_012026, intron 9 of 35) B1_Mus1|SINE|Alu 179089 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-6 chr16 33577968 33578474 + 0.317118655902079 NA intron (NM_001083902, intron 4 of 11) intron (NM_001083902, intron 4 of 11) 59626 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079 chr10 95389445 95389785 + 0.317118655902079 NA Intergenic Intergenic 25668 NM_001168657 216233 Mm.474283 NM_007706 ENSMUSG00000020027 Socs2 8030460M17|AI527257|AW108012|CIS2|Cish2|D130043N08Rik|JAB|SOCS-2|SSI-2|hg suppressor of cytokine signaling 2 protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-2 chr11 64979144 64979536 + 0.317118655902079 NA intron (NM_023479, intron 1 of 24) CpG 305 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-11 chr7 25219124 25219433 + 0.317118655902079 NA intron (NM_207677, intron 1 of 4) CpG 581 NM_207677 67379 Mm.280594 NM_026117 ENSMUSG00000054499 Dedd2 2410050E11Rik|FLAME-3 death effector domain-containing DNA binding protein 2 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-9 chr2 121866254 121866717 + 0.317118655902079 NA promoter-TSS (NM_177054) promoter-TSS (NM_177054) -485 NM_199038 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding unique_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079 chr11 95105156 95105444 + 0.317118655902079 NA Intergenic Intergenic -14817 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-2 chr14 21848326 21848898 + 0.317118655902079 NA exon (NM_026965, exon 2 of 7) exon (NM_026965, exon 2 of 7) 298 NM_026965 69156 Mm.11827 NM_026965 ENSMUSG00000021773 Comtd1 1810030M08Rik|MT773 catechol-O-methyltransferase domain containing 1 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-7 chr17 26938404 26939024 + 0.317118655902079 NA TTS (NM_001302397) TTS (NM_001302397) 744 NR_104458 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-12 chrX 12087877 12088332 + 0.317118655902079 NA intron (NM_001168321, intron 1 of 13) CpG -7551 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-3 chr13 23562937 23563259 + 0.317118655902079 NA promoter-TSS (NM_178205) promoter-TSS (NM_178205) -733 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-5 chr19 23091877 23092202 + 0.317118655902079 NA Intergenic Intergenic -49187 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-2 chr11 104608194 104608534 + 0.317118655902079 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 364 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-9 chr6 108451272 108451712 + 0.317118655902079 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -38251 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-14 chrX 160138004 160138292 + 0.317118655902079 NA intron (NM_008810, intron 1 of 10) CpG 282 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079 chr11 59654635 59655357 + 0.317118655902079 NA Intergenic MER58B|DNA|hAT-Charlie -7499 NM_201245 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|Gm34094|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-7 chr2 117866901 117867254 + 0.317118655902079 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 45149 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-11 chr9 41950131 41950473 + 0.317118655902079 NA Intergenic Intergenic 126911 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079 chr11 119390186 119390743 + 0.317118655902079 NA promoter-TSS (NR_035453) promoter-TSS (NR_035453) -8 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-6 chr2 167713903 167714248 + 0.317118655902079 NA Intergenic Intergenic 22898 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-9 chr7 30625750 30626137 + 0.317118655902079 NA intron (NM_025628, intron 1 of 3) intron (NM_025628, intron 1 of 3) 208 NM_025628 110323 Mm.400 NM_025628 ENSMUSG00000036751 Cox6b1 2010000G05Rik|Cox6b cytochrome c oxidase, subunit VIb polypeptide 1 protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-4 chr15 83448212 83448784 + 0.317118655902079 NA promoter-TSS (NM_001358644) promoter-TSS (NM_001358644) -618 NM_001358644 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-3 chr12 75818391 75818727 + 0.317118655902079 NA intron (NM_001005510, intron 1 of 115) CpG 241 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|KASH2|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-9 chr6 55176697 55177232 + 0.317118655902079 NA Intergenic Intergenic -1974 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-10 chr7 44997655 44997949 + 0.317118655902079 NA promoter-TSS (NM_029410) promoter-TSS (NM_029410) 154 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079 chr13 45941326 45941786 + 0.317118655902079 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 23435 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-5 chr16 8849360 8849923 + 0.317118655902079 NA intron (NM_001081400, intron 3 of 3) intron (NM_001081400, intron 3 of 3) 19541 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-13 chr9 101073156 101073746 + 0.317118655902079 NA Intergenic Intergenic -1311 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 MSL complex subunit 2 protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-6 chr2 25195843 25196511 + 0.317118655902079 NA intron (NM_146115, intron 1 of 1) intron (NM_146115, intron 1 of 1) 636 NM_146115 227612 Mm.119747 NM_146115 ENSMUSG00000059555 Tor4a A830007P12Rik torsin family 4, member A protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-12 chr8 36993628 36993855 + 0.317118655902079 NA exon (NM_001039220, exon 1 of 1) exon (NM_001039220, exon 1 of 1) 166 NM_001039220 621080 Mm.373292 NM_001039220 ENSMUSG00000074384 AI429214 - expressed sequence AI429214 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-3 chr12 24680484 24680979 + 0.317118655902079 NA exon (NM_001161807, exon 1 of 5) exon (NM_001161807, exon 1 of 5) 1064 NM_138686 12879 Mm.52265 NM_138686 ENSMUSG00000062563 Cys1 2900006B19Rik|AV218859|Ccap|ck|cpk cystin 1 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079 chr1 91256755 91257411 + 0.317118655902079 NA intron (NM_001355764, intron 3 of 10) intron (NM_001355764, intron 3 of 10) 6517 NM_001355764 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-13 chrX 103493709 103494185 + 0.317118655902079 NA intron (NR_015508, intron 1 of 2) intron (NR_015508, intron 1 of 2) 389 NR_015508 70252 Mm.380486 NR_015508 ENSMUSG00000097571 Jpx 2010000I03Rik|2510040I06Rik|Enox Jpx transcript, Xist activator (non-protein coding) ncRNA common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-4 chr13 41249832 41250087 + 0.317118655902079 NA 5' UTR (NM_001135577, exon 1 of 2) 5' UTR (NM_001135577, exon 1 of 2) 115 NM_001135577 108934 Mm.38578 NM_001135577 ENSMUSG00000091264 Smim13 2900036K02Rik small integral membrane protein 13 protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-3 chr15 59759361 59759681 + 0.317118655902079 NA Intergenic Intergenic 35438 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-10 chr8 121955247 121955774 + 0.317118655902079 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 5018 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-6 chr2 27804041 27804400 + 0.317118655902079 NA Intergenic Intergenic -82205 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-5 chr17 80807687 80808107 + 0.317118655902079 NA Intergenic Intergenic -79872 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-8 chr3 108571730 108571976 + 0.317118655902079 NA intron (NM_025444, intron 1 of 3) CpG 154 NM_025444 99730 Mm.24431 NM_025444 ENSMUSG00000048100 Taf13 1810004N01Rik|2010309N11Rik|AI847295|TAFII18 TATA-box binding protein associated factor 13 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-8 chr17 71527028 71527390 + 0.317118655902079 NA promoter-TSS (NM_023294) promoter-TSS (NM_023294) -352 NM_023294 67052 Mm.225956 NM_023294 ENSMUSG00000024056 Ndc80 2610020P18Rik|AV139730|HEC|HEC1|Kntc2 NDC80 kinetochore complex component protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-4 chr15 86188517 86189103 + 0.317118655902079 NA Intergenic Intergenic -2669 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-2 chr12 84885982 84886534 + 0.317118655902079 NA Intergenic Intergenic -9763 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak2_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-2 chr10 78297826 78298407 + 0.317118655902079 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 42091 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_31_28_-0.13499593048302_4.79048302988606_0.317118655902079-11 chr9 120866224 120866789 + 0.317118655902079 NA Intergenic Intergenic 48744 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-10 chr7 98487495 98487989 + 0.317118655902079 NA Intergenic Intergenic -6480 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-7 chr5 30960513 30960829 + 0.317118655902079 NA promoter-TSS (NM_016703) promoter-TSS (NM_016703) -344 NM_016703 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding common_peak2_30_28_-0.180476476001545_4.7677427571268_0.317118655902079-8 chr5 122779530 122780037 + 0.317118655902079 NA promoter-TSS (NM_145358) promoter-TSS (NM_145358) -373 NM_145358 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-7 chr8 72475540 72475783 + 0.317118655902073 NA promoter-TSS (NM_138585) promoter-TSS (NM_138585) -428 NM_138585 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-4 chr14 43244872 43245529 + 0.317118655902073 NA Intergenic Intergenic 102611 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-5 chr15 100495009 100495488 + 0.317118655902073 NA promoter-TSS (NM_153407) promoter-TSS (NM_153407) -9 NM_153407 207785 Mm.294969 NM_153407 ENSMUSG00000044636 Csrnp2 CSRNP-2|Csnrp2|taip-12 cysteine-serine-rich nuclear protein 2 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-11 chr2 167828242 167828637 + 0.317118655902073 NA Intergenic Intergenic -103888 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073 chr1 150100241 150100600 + 0.317118655902073 NA promoter-TSS (NR_015466) promoter-TSS (NR_015466) 389 NM_011198 19225 Mm.292547 NM_011198 ENSMUSG00000032487 Ptgs2 COX2|Cox-2|PES-2|PGHS-2|PHS II|PHS-2|Pghs2|TIS10|gripghs prostaglandin-endoperoxide synthase 2 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-10 chr2 70181874 70182259 + 0.317118655902073 NA intron (NM_177376, intron 8 of 34) intron (NM_177376, intron 8 of 34) 142940 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-2 chr11 97186558 97187112 + 0.317118655902073 NA intron (NM_008379, intron 2 of 21) intron (NM_008379, intron 2 of 21) 1057 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-6 chr16 30599812 30600118 + 0.317118655902073 NA 5' UTR (NM_177632, exon 1 of 1) 5' UTR (NM_177632, exon 1 of 1) 242 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-5 chr6 128355430 128355796 + 0.317118655902073 NA intron (NM_011657, intron 1 of 10) CpG 238 NM_011657 22158 Mm.291783 NM_011657 ENSMUSG00000001521 Tulp3 2310022L06Rik|AI316887 tubby-like protein 3 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-7 chr16 45382607 45383125 + 0.317118655902073 NA 3' UTR (NM_010818, exon 6 of 6) 3' UTR (NM_010818, exon 6 of 6) 26187 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073 chr1 131134833 131135312 + 0.317118655902073 NA intron (NM_145508, intron 2 of 2) intron (NM_145508, intron 2 of 2) 3162 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-4 chr4 116464440 116464951 + 0.317118655902073 NA promoter-TSS (NM_008641) promoter-TSS (NM_008641) -514 NM_008641 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-12 chr9 98986505 98986954 + 0.317118655902073 NA intron (NM_011810, intron 1 of 4) CpG 356 NM_001122851 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-9 chr2 60639923 60640140 + 0.317118655902073 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 33662 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-6 chr7 127691613 127692058 + 0.317118655902073 NA intron (NM_001347652, intron 5 of 5) intron (NM_001347652, intron 5 of 5) -16652 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak2_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-3 chr17 84196840 84197208 + 0.317118655902073 NA intron (NM_183021, intron 36 of 37) intron (NM_183021, intron 36 of 37) -9077 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-2 chr10 40036486 40036959 + 0.317118655902073 NA 3' UTR (NM_001114332, exon 6 of 6) 3' UTR (NM_001114332, exon 6 of 6) -11454 NM_144821 215929 Mm.55513 NM_144821 ENSMUSG00000038522 Mfsd4b1 AI317395|AI482555|Naglt1a major facilitator superfamily domain containing 4B1 protein-coding unique_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073 chr16 10313437 10314213 + 0.317118655902073 NA 5' UTR (NM_007929, exon 1 of 5) 5' UTR (NM_007929, exon 1 of 5) 143 NM_007929 13731 Mm.246009 NM_007929 ENSMUSG00000022505 Emp2 XMP epithelial membrane protein 2 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-3 chr12 53252739 53253351 + 0.317118655902073 NA intron (NM_013780, intron 1 of 11) CpG 4368 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak1_33_26_0.0549433551729832_4.78235917974996_0.317118655902073-8 chr17 73377528 73377800 + 0.317118655902073 NA intron (NM_001033444, intron 2 of 22) intron (NM_001033444, intron 2 of 22) 21632 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak1_129_110_-0.0633307522876025_6.7627504902063_0.317115895953202 chr12 27342945 27344509 + 0.317115895953202 NA Intergenic Intergenic -1009 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_129_110_-0.0633307522876025_6.7627504902063_0.317115895953202 chr17 15825418 15826589 + 0.317115895953202 NA intron (NM_178615, intron 1 of 2) CpG 583 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding common_peak2_296_247_-0.0395690806806961_7.93441177004653_0.31704945804461 chr8 111729221 111731999 + 0.31704945804461 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 1526 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_130_111_-0.0652926136152132_6.77470861525_0.31696830224442 chr5 5690447 5692137 + 0.31696830224442 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 2797 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak2_135_107_0.0408333960264953_6.77530420017672_0.31696830224442 chr16 45838267 45839910 + 0.31696830224442 NA intron (NM_001357078, intron 1 of 16) intron (NM_001357078, intron 1 of 16) 5290 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_130_111_-0.0652926136152132_6.77470861525_0.31696830224442 chr3 83843788 83845316 + 0.31696830224442 NA Intergenic Intergenic -2944 NM_011905 24088 Mm.87596 NM_011905 ENSMUSG00000027995 Tlr2 Ly105 toll-like receptor 2 protein-coding common_peak2_76_60_0.0500971146083025_5.95578589486704_0.316920393882012-2 chr4 98923620 98924234 + 0.316920393882012 NA 5' UTR (NM_146144, exon 1 of 9) 5' UTR (NM_146144, exon 1 of 9) 117 NM_001356424 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding common_peak2_76_60_0.0500971146083025_5.95578589486704_0.316920393882012 chr11 3451506 3452328 + 0.316920393882012 NA promoter-TSS (NR_028317) promoter-TSS (NR_028317) -520 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA common_peak1_72_63_-0.0955845644340734_5.95220771778296_0.316920393882 chr17 44710205 44711174 + 0.316920393882 NA intron (NM_001271627, intron 4 of 7) B4A|SINE|B4 25487 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_72_63_-0.0955845644340734_5.95220771778296_0.316920393882-3 chr3 30995451 30996092 + 0.316920393882 NA promoter-TSS (NM_008857) promoter-TSS (NM_008857) 0 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak2_72_63_-0.0955845644340734_5.95220771778296_0.316920393882-2 chr19 16949869 16950897 + 0.316920393882 NA Intergenic Intergenic -5735 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_72_63_-0.0955845644340734_5.95220771778296_0.316920393882 chr17 62881784 62883103 + 0.316920393882 NA Intergenic CpG-6536 -1126 NM_010109 13640 Mm.7978 NM_010109 ENSMUSG00000048915 Efna5 AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS ephrin A5 protein-coding common_peak1_213_169_0.0357201213182137_7.42725099679681_0.316857614622472 chr8 47973604 47975522 + 0.316857614622472 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 15988 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_131_112_-0.0672229371639181_6.78656749383323_0.316823392505376 chr18 60651237 60652494 + 0.316823392505376 NA Intergenic Intergenic -11545 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_131_112_-0.0672229371639181_6.78656749383323_0.316823392505376 chr19 60579869 60580965 + 0.316823392505376 NA exon (NM_001172096, exon 1 of 8) exon (NM_001172096, exon 1 of 8) 606 NM_001172097 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding common_peak1_136_108_0.0380312493388537_6.78719994944635_0.316823392505351 chr5 144255242 144256735 + 0.316823392505351 NA intron (NM_001163709, intron 2 of 2) intron (NM_001163709, intron 2 of 2) 763 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding common_peak2_133_113_-0.0583919760975977_6.80369402611594_0.316681094180467 chr15 79402485 79403873 + 0.316681094180467 NA promoter-TSS (NM_001253817) promoter-TSS (NM_001253817) 60 NM_001253820 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_137_109_0.0352742109258051_6.79899681898756_0.316681094180467 chr6 50565432 50567183 + 0.316681094180467 NA promoter-TSS (NR_015581) promoter-TSS (NR_015581) 167 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak2_77_61_0.0451224867224491_5.9767575537481_0.316666098280098 chr18 24723184 24723807 + 0.316666098280098 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 14872 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_77_61_0.0451224867224491_5.9767575537481_0.316666098280098-2 chr19 27218406 27219164 + 0.316666098280098 NA intron (NM_001161420, intron 1 of 17) intron (NM_001161420, intron 1 of 17) 1765 NM_001161420 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak1_77_61_0.0451224867224491_5.9767575537481_0.316666098280098 chr15 11565600 11566277 + 0.316666098280098 NA Intergenic Intergenic -166280 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_77_61_0.0451224867224491_5.9767575537481_0.316666098280098-3 chr7 27731436 27732222 + 0.316666098280098 NA intron (NM_009560, intron 1 of 4) intron (NM_009560, intron 1 of 4) 420 NM_009560 22718 Mm.66913 NM_009560 ENSMUSG00000037640 Zfp60 6330516O17Rik|AI426106|AI449354|Mfg-3|Mfg3 zinc finger protein 60 protein-coding common_peak1_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086-2 chr11 8675119 8676104 + 0.316666098280086 NA Intergenic Intergenic -11076 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086 chr1 58715595 58716610 + 0.316666098280086 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) 2816 NM_001355056 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086-5 chr4 150371787 150372573 + 0.316666098280086 NA intron (NM_001085492, intron 1 of 22) CpG 90264 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086-3 chr13 55105321 55106071 + 0.316666098280086 NA intron (NM_012017, intron 1 of 6) CpG 387 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding common_peak1_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086-4 chr19 5388214 5388661 + 0.316666098280086 NA non-coding (NR_033224, exon 1 of 1) non-coding (NR_033224, exon 1 of 1) 101 NR_033224 414115 Mm.483102 NR_033224 D330050I16Rik - RIKEN cDNA D330050I16 gene ncRNA common_peak1_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086-6 chr6 142275248 142276176 + 0.316666098280086 NA intron (NM_130861, intron 1 of 14) MTD|LTR|ERVL-MaLR 3162 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak2_73_64_-0.0984620515442565_5.97313678725633_0.316666098280086 chr2 28641008 28641943 + 0.316666098280086 NA intron (NM_001289575, intron 1 of 22) CpG 242 NM_022887 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding common_peak2_304_254_-0.0416504279485919_7.97352822288456_0.316602678548921 chr8 34054082 34057251 + 0.316602678548921 NA Intergenic Intergenic 52148 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak1_312_248_0.0297909637483906_7.97489741394228_0.316602678548921 chr15 98532515 98534589 + 0.316602678548921 NA exon (NM_001289437, exon 2 of 10) exon (NM_001289437, exon 2 of 10) 717 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-2 chr1 151228927 151229286 + 0.316543811862083 NA Intergenic Intergenic 91072 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-3 chr10 86103544 86104157 + 0.316543811862083 NA intron (NR_038024, intron 1 of 2) intron (NR_038024, intron 1 of 2) 7996 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-6 chr17 84465766 84466197 + 0.316543811862083 NA intron (NM_183021, intron 1 of 37) CpG 227 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-15 chr6 117716463 117716983 + 0.316543811862083 NA intron (NR_045731, intron 2 of 3) RLTR45-int|LTR|ERVK 35046 NR_045731 72263 Mm.443289 NR_045731 ENSMUSG00000099869 1700030F04Rik - RIKEN cDNA 1700030F04 gene ncRNA common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-13 chr7 83717210 83717603 + 0.316543811862083 NA intron (NM_001360088, intron 2 of 18) intron (NM_001360088, intron 2 of 18) 14992 NM_001360087 16170 Mm.10137 NM_010551 ENSMUSG00000001741 Il16 mKIAA4048 interleukin 16 protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-8 chr5 140321224 140321864 + 0.316543811862083 NA promoter-TSS (NM_010752) promoter-TSS (NM_010752) 8 NM_001359025 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-9 chr4 155581862 155582313 + 0.316543811862083 NA intron (NM_001355599, intron 2 of 10) B1_Mus1|SINE|Alu 18272 NM_001355599 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-2 chr13 17605922 17606514 + 0.316543811862083 NA intron (NM_138654, intron 6 of 13) intron (NM_138654, intron 6 of 13) 88547 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-12 chr7 4137519 4137821 + 0.316543811862083 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 614 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-13 chr4 127076819 127077278 + 0.316543811862083 NA promoter-TSS (NM_001285885) promoter-TSS (NM_001285885) -335 NM_001285885 100177 Mm.276096 NM_177462 ENSMUSG00000042408 Zmym6 9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258 zinc finger, MYM-type 6 protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-5 chr16 64873597 64874168 + 0.316543811862083 NA Intergenic Intergenic 21881 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-6 chr16 15887052 15887524 + 0.316543811862083 NA promoter-TSS (NM_007679) promoter-TSS (NM_007679) 2 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-10 chrX 20662994 20663292 + 0.316543811862083 NA intron (NM_001136085, intron 1 of 25) intron (NM_001136085, intron 1 of 25) 247 NM_001136085 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding unique_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083 chr7 143295887 143296506 + 0.316543811862083 NA non-coding (NR_001461, exon 1 of 1) non-coding (NR_001461, exon 1 of 1) 351 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-6 chr13 101768556 101768974 + 0.316543811862083 NA promoter-TSS (NM_001077495) promoter-TSS (NM_001077495) -548 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-16 chr7 139834544 139834937 + 0.316543811862083 NA intron (NM_177469, intron 1 of 7) intron (NM_177469, intron 1 of 7) 566 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-10 chr5 30232025 30232375 + 0.316543811862083 NA promoter-TSS (NR_137634) promoter-TSS (NR_137634) -381 NM_027652 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-9 chr6 85371806 85372297 + 0.316543811862083 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) 2583 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding unique_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083 chr2 27732838 27733436 + 0.316543811862083 NA intron (NM_001290482, intron 1 of 9) intron (NM_001290482, intron 1 of 9) 22554 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083 chr1 40278834 40279529 + 0.316543811862083 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 12595 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-10 chr18 75018799 75019245 + 0.316543811862083 NA intron (NM_027727, intron 1 of 16) CpG 250 NM_027727 69190 Mm.173826 NM_027727 ENSMUSG00000035765 Dym 1810041M12Rik|4933427L07Rik|C030019K18Rik dymeclin protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-8 chr3 79679056 79679633 + 0.316543811862083 NA intron (NM_212452, intron 4 of 17) intron (NM_212452, intron 4 of 17) 50265 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding common_peak1_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-2 chr12 13211640 13212179 + 0.316543811862083 NA Intergenic Intergenic 37265 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-17 chr9 102714847 102715334 + 0.316543811862083 NA Intergenic Intergenic -2714 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding unique_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-2 chrX 74282859 74283615 + 0.316543811862083 NA promoter-TSS (NM_001172154) promoter-TSS (NM_001172154) 519 NM_001242615 66826 Mm.268483 NM_181516 ENSMUSG00000009995 Taz 5031411C02Rik|9130012G04Rik|AW107266|AW552613|G4.5 tafazzin protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-5 chr13 35818345 35818826 + 0.316543811862083 NA intron (NM_009881, intron 5 of 9) intron (NM_009881, intron 5 of 9) 77183 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-7 chr3 7366415 7367004 + 0.316543811862083 NA 5' UTR (NM_008862, exon 1 of 3) 5' UTR (NM_008862, exon 1 of 3) 105 NM_008862 18767 Mm.3193 NM_008862 ENSMUSG00000027499 Pkia AI415001|PKIalpha protein kinase inhibitor, alpha protein-coding common_peak1_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-5 chr6 72927068 72927541 + 0.316543811862083 NA Intergenic Intergenic -27325 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083 chr1 43159419 43159950 + 0.316543811862083 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 4277 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-4 chr15 27802583 27803041 + 0.316543811862083 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -121270 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-8 chr17 84600411 84600920 + 0.316543811862083 NA intron (NM_001357987, intron 22 of 28) intron (NM_001357987, intron 22 of 28) -25834 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding unique_peak1_32_29_-0.13982461121076_4.83697829000314_0.316543811862083 chr13 21834018 21834538 + 0.316543811862083 NA promoter-TSS (NM_001177544).2 promoter-TSS (NM_001177544).2 535 NM_001110555 665622 Mm.471247 NM_001110555 ENSMUSG00000069303 Hist1h2br Gm11277 histone cluster 1 H2br protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-2 chr10 59942931 59943614 + 0.316543811862083 NA Intergenic Intergenic 8498 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-3 chr13 28629455 28629950 + 0.316543811862083 NA intron (NR_045054, intron 5 of 7) intron (NR_045054, intron 5 of 7) 81171 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-12 chr2 38286950 38287420 + 0.316543811862083 NA 5' UTR (NM_146122, exon 1 of 22) 5' UTR (NM_146122, exon 1 of 22) 199 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083 chr1 162094579 162095064 + 0.316543811862083 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) 89852 NR_040562 72753 Mm.452125 NR_040562 ENSMUSG00000090260 2810442N19Rik - RIKEN cDNA 2810442N19 gene ncRNA common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-3 chr11 108214693 108215350 + 0.316543811862083 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 128867 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-9 chr18 12973516 12974209 + 0.316543811862083 NA promoter-TSS (NM_001357396) promoter-TSS (NM_001357396) -598 NM_001357396 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-11 chr5 33819562 33820042 + 0.316543811862083 NA Intergenic Intergenic -23310 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Nsd2 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|Whsc1|Whsc1l|mKIAA1090 nuclear receptor binding SET domain protein 2 protein-coding common_peak1_32_29_-0.13982461121076_4.83697829000314_0.316543811862083 chr10 24149455 24149741 + 0.316543811862083 NA 5' UTR (NM_016797, exon 1 of 10) 5' UTR (NM_016797, exon 1 of 10) 281 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-7 chr17 25579267 25579619 + 0.316543811862083 NA intron (NR_045520, intron 1 of 8) intron (NR_045520, intron 1 of 8) 269 NR_045520 76483 Mm.12787 NM_029624 ENSMUSG00000002279 Lmf1 2400010G15Rik|AW822050|Tmem112|cld lipase maturation factor 1 protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-4 chr12 80220538 80220843 + 0.316543811862083 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 39681 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-5 chr15 61988711 61989045 + 0.316543811862083 NA intron (NM_001177352, intron 2 of 2) intron (NM_001177352, intron 2 of 2) 3537 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-4 chr19 59879772 59880428 + 0.316543811862083 NA Intergenic MLT1I|LTR|ERVL-MaLR 63264 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-7 chr16 45366450 45366897 + 0.316543811862083 NA Intergenic Intergenic 42380 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-4 chr15 64557820 64558072 + 0.316543811862083 NA Intergenic Intergenic -175027 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-11 chr19 44562906 44563230 + 0.316543811862083 NA intron (NM_176958, intron 1 of 7) intron (NM_176958, intron 1 of 7) 214 NM_176958 319594 Mm.145278 NM_176958 ENSMUSG00000036450 Hif1an 2310046M24Rik|A830014H24Rik|FIH|FIH1 hypoxia-inducible factor 1, alpha subunit inhibitor protein-coding common_peak1_32_29_-0.13982461121076_4.83697829000314_0.316543811862083-3 chr16 24435638 24436154 + 0.316543811862083 NA intron (NM_178665, intron 1 of 12) MLT1G3|LTR|ERVL-MaLR -12195 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_34_27_0.0440010704881999_4.8293554573017_0.316543811862083-14 chr6 81923769 81924092 + 0.316543811862083 NA exon (NM_177884, exon 1 of 17) exon (NM_177884, exon 1 of 17) 261 NM_177884 330361 Mm.474487 NM_177884 ENSMUSG00000035125 Gcfc2 A130099G21|AW146020|GCF2|Tcf9 GC-rich sequence DNA binding factor 2 protein-coding common_peak1_139_110_0.0428301670492095_6.81583094987471_0.316541337305917 chr8 88696930 88697699 + 0.316541337305917 NA intron (NM_001128170, intron 1 of 17) CpG 286 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak2_138_110_0.0325611850329803_6.8106964588666_0.316541337305917 chr2 91069257 91070278 + 0.316541337305917 NA intron (NM_001290765, intron 1 of 9) intron (NM_001290765, intron 1 of 9) 548 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_138_110_0.0325611850329803_6.8106964588666_0.316541337305917 chr8 85840028 85841484 + 0.316541337305917 NA promoter-TSS (NM_199446) promoter-TSS (NM_199446) 193 NM_028007 71927 Mm.61018 NM_028007 ENSMUSG00000031703 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 protein-coding common_peak2_139_110_0.0428301670492095_6.81583094987471_0.316541337305917 chr14 25476383 25477955 + 0.316541337305917 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 17984 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_134_114_-0.0603412808635806_6.81531941051258_0.316541337305917 chr16 32078392 32079425 + 0.316541337305917 NA intron (NM_177326, intron 1 of 14) CpG 434 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding common_peak2_212_178_-0.0454144129033143_7.4611085708126_0.31649684648186 chr10 99263354 99265034 + 0.31649684648186 NA intron (NM_026268, intron 1 of 2) intron (NM_026268, intron 1 of 2) 963 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_428_341_0.0235466610294477_8.42962584540062_0.31647324364467 chr19 10136506 10139139 + 0.31647324364467 NA Intergenic Intergenic -36319 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-3 chr13 37857093 37858202 + 0.316419814260458 NA intron (NM_001039188, intron 1 of 9) CpG 30254 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_75_65_-0.0822856443865509_6.00325129716518_0.316419814260458 chr4 89484787 89485960 + 0.316419814260458 NA intron (NR_132431, intron 7 of 9) intron (NR_132431, intron 7 of 9) -174341 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_74_65_-0.101259654978691_5.99376429186911_0.316419814260458 chr15 76511262 76511705 + 0.316419814260458 NA intron (NM_010046, intron 1 of 16) intron (NM_010046, intron 1 of 16) 511 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak2_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-3 chr8 13676720 13677537 + 0.316419814260458 NA intron (NM_009025, intron 1 of 23) CpG 459 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-4 chr16 8637010 8638009 + 0.316419814260458 NA promoter-TSS (NM_016881) promoter-TSS (NM_016881) 192 NM_025708 66690 Mm.10068 NM_025708 ENSMUSG00000043140 Tmem186 2810440M13Rik|4432406C05Rik|AI648175|AW210586 transmembrane protein 186 protein-coding common_peak2_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-2 chr19 8735536 8736433 + 0.316419814260458 NA intron (NM_134139, intron 1 of 10) CpG 145 NM_134139 107071 Mm.29627 NM_134139 ENSMUSG00000042729 Wdr74 5730436H21Rik|AA407588 WD repeat domain 74 protein-coding common_peak1_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-2 chr10 68238455 68239368 + 0.316419814260458 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 39815 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-5 chr19 28620545 28621605 + 0.316419814260458 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -57149 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_74_65_-0.101259654978691_5.99376429186911_0.316419814260458 chr1 151091821 151092867 + 0.316419814260458 NA Intergenic Intergenic -45690 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_74_65_-0.101259654978691_5.99376429186911_0.316419814260458-6 chr2 121170821 121171748 + 0.316419814260458 NA promoter-TSS (NM_001290819) promoter-TSS (NM_001290819) 116 NM_001290824 51885 Mm.383499 NM_153387 ENSMUSG00000027263 Tubgcp4 4932441P04Rik|76p|D2Ertd435e|GCP-4 tubulin, gamma complex associated protein 4 protein-coding common_peak1_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-2 chr11 69980903 69981784 + 0.316419814260445 NA promoter-TSS (NM_018740) promoter-TSS (NM_018740) -108 NM_018740 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak1_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-5 chr3 146812082 146812846 + 0.316419814260445 NA intron (NM_011100, intron 1 of 9) CpG 482 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-3 chr16 32877757 32878595 + 0.316419814260445 NA intron (NM_001356387, intron 1 of 7) CpG 392 NM_001159349 69823 Mm.12831 NM_027226 ENSMUSG00000022800 Fyttd1 2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190 forty-two-three domain containing 1 protein-coding common_peak1_78_62_0.0402877427753596_5.9974237948876_0.316419814260445 chr11 4594058 4594788 + 0.316419814260445 NA intron (NM_028860, intron 1 of 17) CpG 392 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak2_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-2 chr15 77863984 77864550 + 0.316419814260445 NA Intergenic Intergenic -22092 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_78_62_0.0402877427753596_5.9974237948876_0.316419814260445 chr12 52603114 52603760 + 0.316419814260445 NA Intergenic Intergenic -1115 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak1_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-3 chr16 17759644 17760363 + 0.316419814260445 NA intron (NM_145479, intron 1 of 6) CpG 382 NM_001359068 224023 Mm.282807 NM_145479 ENSMUSG00000022750 Klhl22 2610318I18Rik|Kelchl kelch-like 22 protein-coding common_peak1_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-6 chr8 69996724 69997313 + 0.316419814260445 NA promoter-TSS (NM_145596) promoter-TSS (NM_145596) -634 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_78_62_0.0402877427753596_5.9974237948876_0.316419814260445-4 chr3 121639777 121641253 + 0.316419814260445 NA intron (NR_036458, intron 1 of 2) intron (NR_036458, intron 1 of 2) 2970 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_315_251_0.0261777836288717_7.99036881531435_0.316418740618613 chr17 25272196 25274193 + 0.316418740618613 NA promoter-TSS (NR_027452) promoter-TSS (NR_027452) 237 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak2_135_115_-0.0622600969376084_6.82685094665877_0.316404054395418 chr3 35932196 35933579 + 0.316404054395418 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) 79 NM_001205361 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak2_136_116_-0.0641491454676251_6.83829014684959_0.316269180331012 chr11 86574851 86577256 + 0.316269180331012 NA Intergenic PB1|SINE|Alu 8105 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_221_176_0.0300808340554104_7.4826459671107_0.316236882265196 chr15 76079749 76080932 + 0.316236882265196 NA intron (NM_001356629, intron 1 of 12) intron (NM_001356629, intron 1 of 12) 530 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding common_peak2_76_66_-0.0852547382865829_6.02346182131448_0.316181169053401 chr2 29691800 29692513 + 0.316181169053401 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -69372 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding common_peak1_79_63_0.0355869838251861_6.01779349191259_0.316181169053401-2 chr13 38658263 38659078 + 0.316181169053401 NA intron (NM_025380, intron 1 of 3) CpG 358 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding common_peak1_79_63_0.0355869838251861_6.01779349191259_0.316181169053401-4 chr2 60901710 60902507 + 0.316181169053401 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) -20670 NM_001141931 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_80_63_0.0533824531276137_6.02669122656381_0.316181169053401 chr11 68853303 68854160 + 0.316181169053401 NA promoter-TSS (NM_023668) promoter-TSS (NM_023668) -600 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak2_79_63_0.0355869838251861_6.01779349191259_0.316181169053401 chr11 93967308 93968179 + 0.316181169053401 NA intron (NM_008704, intron 1 of 4) intron (NM_008704, intron 1 of 4) 778 NM_008704 18102 Mm.439702 NM_008704 ENSMUSG00000037601 Nme1 AL024257|NDPK-A|NM23-M1|NM23A NME/NM23 nucleoside diphosphate kinase 1 protein-coding common_peak1_79_63_0.0355869838251861_6.01779349191259_0.316181169053401 chr10 18055568 18056462 + 0.316181169053401 NA promoter-TSS (NM_001111065) promoter-TSS (NM_001111065) 75 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_76_66_-0.0852547382865829_6.02346182131448_0.316181169053401 chr6 83136958 83137630 + 0.316181169053401 NA 5' UTR (NM_009106, exon 1 of 13) 5' UTR (NM_009106, exon 1 of 13) 210 NM_133641 20166 Mm.4139 NM_009106 ENSMUSG00000034930 Rtkn - rhotekin protein-coding common_peak2_80_63_0.0533824531276137_6.02669122656381_0.316181169053401 chr11 80428564 80429194 + 0.316181169053401 NA intron (NM_178616, intron 1 of 13) CpG 264 NM_178616 69077 Mm.260539 NM_178616 ENSMUSG00000017428 Psmd11 1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding common_peak2_79_63_0.0355869838251861_6.01779349191259_0.316181169053401-2 chr15 5538787 5539704 + 0.316181169053401 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 42927 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_79_63_0.0355869838251861_6.01779349191259_0.316181169053401-3 chr15 79516530 79517182 + 0.316181169053401 NA intron (NM_134090, intron 1 of 4) intron (NM_134090, intron 1 of 4) 448 NM_134090 105785 Mm.298199 NM_134090 ENSMUSG00000010830 Kdelr3 AI173274 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 protein-coding common_peak1_80_63_0.0533824531276137_6.02669122656381_0.316181169053401-2 chr15 77863967 77864610 + 0.316181169053401 NA Intergenic Intergenic -22113 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_79_63_0.0355869838251861_6.01779349191259_0.316181169053401-5 chr5 124445600 124446559 + 0.316181169053401 NA promoter-TSS (NM_001310727) promoter-TSS (NM_001310727) 580 NM_001310723 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak2_223_177_0.0348007241057946_7.49313379301929_0.316152158740079 chr4 119125509 119127370 + 0.316152158740079 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 17694 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_142_113_0.0347285390963918_6.85025428371294_0.316136652260595 chr11 86593398 86594495 + 0.316136652260595 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -9788 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_137_117_-0.0660091249113766_6.84963848690615_0.316136652260595 chr2 109890375 109891393 + 0.316136652260595 NA promoter-TSS (NM_011699) promoter-TSS (NM_011699) 6 NM_011699 22343 Mm.235300 NM_011699 ENSMUSG00000027162 Lin7c 9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3 lin-7 homolog C (C. elegans) protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-6 chr2 112265690 112266238 + 0.316008636696545 NA promoter-TSS (NM_133649) promoter-TSS (NM_133649) -350 NM_133649 107723 Mm.491155 NM_133648 ENSMUSG00000027130 Slc12a6 9530023I19Rik|KCC3|gaxp solute carrier family 12, member 6 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-7 chr18 75018722 75019152 + 0.316008636696545 NA 5' UTR (NM_027727, exon 1 of 17) 5' UTR (NM_027727, exon 1 of 17) 165 NM_027727 69190 Mm.173826 NM_027727 ENSMUSG00000035765 Dym 1810041M12Rik|4933427L07Rik|C030019K18Rik dymeclin protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-10 chr3 35754150 35754740 + 0.316008636696545 NA intron (NR_151627, intron 1 of 31) CpG 382 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-6 chr17 24141224 24141480 + 0.316008636696545 NA intron (NM_001286662, intron 1 of 13) CpG 242 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545 chr1 192779928 192780724 + 0.316008636696545 NA Intergenic Intergenic -9107 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-15 chr9 106247490 106247893 + 0.316008636696545 NA promoter-TSS (NM_001291835) promoter-TSS (NM_001291835) 39 NM_001291835 11655 Mm.290578 NM_020559 ENSMUSG00000032786 Alas1 ALAS|ALAS-N|Alas-1|Alas-h aminolevulinic acid synthase 1 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-5 chr15 80257585 80258210 + 0.316008636696545 NA TTS (NM_001287180) TTS (NM_001287180) 2713 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-13 chr6 127991219 127991640 + 0.316008636696545 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 103807 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-4 chr12 99884685 99885217 + 0.316008636696545 NA intron (NM_028354, intron 1 of 15) intron (NM_028354, intron 1 of 15) 436 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-14 chr7 74173451 74174011 + 0.316008636696545 NA Intergenic Intergenic -160049 NM_009181 20450 Mm.4954 NM_009181 ENSMUSG00000025789 St8sia2 AI323367|ST8SiaII|STX|Siat8b ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-4 chr13 37784526 37784939 + 0.316008636696545 NA Intergenic Intergenic -41306 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-7 chr2 128416777 128417440 + 0.316008636696545 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 12243 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 - predicted gene 14005 ncRNA common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-3 chr12 35294537 35295317 + 0.316008636696545 NA Intergenic Intergenic -100030 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-2 chr10 24580082 24580650 + 0.316008636696545 NA Intergenic Intergenic -15076 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-8 chr19 18714222 18714676 + 0.316008636696545 NA intron (NM_177640, intron 1 of 1) intron (NM_177640, intron 1 of 1) 1213 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-9 chr8 106192620 106193080 + 0.316008636696545 NA non-coding (NR_151676, exon 4 of 9) non-coding (NR_151676, exon 4 of 9) 18083 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-8 chr6 112261735 112262571 + 0.316008636696545 NA Intergenic MLT1A1|LTR|ERVL-MaLR -11605 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-11 chr4 89382649 89383419 + 0.316008636696545 NA intron (NR_132431, intron 2 of 9) MIRc|SINE|MIR -72002 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-12 chr4 95917290 95917750 + 0.316008636696545 NA intron (NM_001113412, intron 14 of 15) intron (NM_001113412, intron 14 of 15) 49515 NR_045777 319247 Mm.473527 NM_175680 ENSMUSG00000044125 9530080O11Rik - RIKEN cDNA 9530080O11 gene ncRNA common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-9 chr19 47067819 47068194 + 0.316008636696545 NA exon (NM_177342, exon 1 of 11) exon (NM_177342, exon 1 of 11) 258 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545 chr1 58358891 58359479 + 0.316008636696545 NA intron (NM_001008419, intron 34 of 35) intron (NM_001008419, intron 34 of 35) -33951 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-3 chr10 80756736 80757114 + 0.316008636696545 NA intron (NM_199322, intron 1 of 27) intron (NM_199322, intron 1 of 27) 1722 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-2 chr12 33147791 33148057 + 0.316008636696545 NA promoter-TSS (NR_015602) promoter-TSS (NR_015602) 238 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_33_30_-0.144365453050423_4.88201358386166_0.316008636696545-5 chr16 78576445 78576895 + 0.316008636696545 NA promoter-TSS (NM_001252440) promoter-TSS (NM_001252440) 18 NM_001252438 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-7 chr6 120470104 120470446 + 0.316008636696532 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 7078 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-3 chr19 41998786 41999311 + 0.316008636696532 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 17285 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-3 chr13 101768423 101768927 + 0.316008636696532 NA promoter-TSS (NM_001077495) promoter-TSS (NM_001077495) -458 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-9 chr3 69045041 69045408 + 0.316008636696532 NA promoter-TSS (NM_025863) promoter-TSS (NM_025863) -482 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-6 chr19 4112546 4113109 + 0.316008636696532 NA TTS (NM_001276284) TTS (NM_001276284) 8748 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding unique_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532 chr19 60811581 60812143 + 0.316008636696532 NA intron (NM_026437, intron 1 of 8) CpG 307 NM_001347464 67894 Mm.26148 NM_026437 ENSMUSG00000024993 Fam45a 1810055E12Rik family with sequence similarity 45, member A protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-12 chr5 64850239 64850583 + 0.316008636696532 NA Intergenic Intergenic 46888 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-5 chr18 39381207 39381609 + 0.316008636696532 NA Intergenic Intergenic 105837 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-4 chr4 40821968 40822507 + 0.316008636696532 NA intron (NM_022305, intron 2 of 5) intron (NM_022305, intron 2 of 5) 27901 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-15 chr7 144039553 144039954 + 0.316008636696532 NA Intergenic Intergenic 30499 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-2 chr11 69981301 69981566 + 0.316008636696532 NA promoter-TSS (NM_018740) promoter-TSS (NM_018740) -198 NM_018740 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-8 chr2 33206393 33206852 + 0.316008636696532 NA intron (NM_001290570, intron 7 of 16) intron (NM_001290570, intron 7 of 16) -9339 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-10 chr3 86793643 86794201 + 0.316008636696532 NA intron (NM_001357460, intron 13 of 16) intron (NM_001357460, intron 13 of 16) 126962 NM_001195499 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-14 chr7 127769879 127770286 + 0.316008636696532 NA exon (NM_198424, exon 1 of 2) exon (NM_198424, exon 1 of 2) 267 NM_198424 269999 Mm.36852 NM_198424 ENSMUSG00000043964 Orai3 9930124N15|BC061259|Tmem142c ORAI calcium release-activated calcium modulator 3 protein-coding common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532 chr11 96260592 96260986 + 0.316008636696532 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) -4375 NR_029721 387191 NR_029721 ENSMUSG00000065546 Mir196a-1 Mirn196|Mirn196a-1|miR-196|mir-196a-1 microRNA 196a-1 ncRNA common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-11 chr4 151044290 151044615 + 0.316008636696532 NA 5' UTR (NM_001289878, exon 1 of 22) 5' UTR (NM_001289878, exon 1 of 22) 213 NM_011067 18628 Mm.121361 NM_011067 ENSMUSG00000028957 Per3 2810049O06Rik|mPer3 period circadian clock 3 protein-coding common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-6 chr5 96800477 96801201 + 0.316008636696532 NA intron (NM_013470, intron 2 of 12) intron (NM_013470, intron 2 of 12) 7454 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-2 chr12 8640799 8641038 + 0.316008636696532 NA Intergenic CpG -33216 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532 chr11 35970045 35970433 + 0.316008636696532 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 9850 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-4 chr17 24723884 24724332 + 0.316008636696532 NA intron (NM_026684, intron 1 of 3) CpG 280 NM_026684 68342 Mm.1129 NM_026684 ENSMUSG00000040048 Ndufb10 0610011B04Rik|22kDa|PDSW NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 protein-coding unique_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-2 chrX 7259499 7260303 + 0.316008636696532 NA intron (NM_001243762, intron 2 of 13) intron (NM_001243762, intron 2 of 13) -11404 NR_030242 751544 NR_030242 ENSMUSG00000070139 Mir532 Mirn532|mir-532|mmu-mir-532 microRNA 532 ncRNA common_peak1_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-5 chr4 139967770 139968409 + 0.316008636696532 NA promoter-TSS (NM_173427) promoter-TSS (NM_173427) -63 NM_173427 242721 Mm.60400 NM_173427 ENSMUSG00000078234 Klhdc7a B230308G19Rik kelch domain containing 7A protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-7 chr2 25211030 25211412 + 0.316008636696532 NA exon (NM_021393, exon 1 of 13) exon (NM_021393, exon 1 of 13) 268 NM_021393 58202 Mm.116418 NM_021393 ENSMUSG00000013465 Nelfb A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b negative elongation factor complex member B protein-coding common_peak2_35_28_0.0337302535451327_4.87484612190014_0.316008636696532-13 chr5 124112057 124112527 + 0.316008636696532 NA promoter-TSS (NM_025671) promoter-TSS (NM_025671) -29 NM_001361482 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding common_peak1_138_118_-0.0678407119248572_6.86089740734552_0.316006409499609 chr11 109650111 109651848 + 0.316006409499609 NA promoter-TSS (NM_021880) promoter-TSS (NM_021880) 58 NM_001313976 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding common_peak1_144_114_0.0420248896135273_6.86650249575114_0.316006409499609 chr7 112427177 112428489 + 0.316006409499609 NA 5' UTR (NM_020606, exon 1 of 13) 5' UTR (NM_020606, exon 1 of 13) 127 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak1_143_114_0.0321112385818418_6.8615456702353_0.316006409499609-2 chr5 146832716 146834042 + 0.316006409499609 NA intron (NM_019647, intron 1 of 5) CpG 489 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak1_143_114_0.0321112385818418_6.8615456702353_0.316006409499609 chr2 59612105 59613481 + 0.316006409499609 NA intron (NM_198294, intron 1 of 26) intron (NM_198294, intron 1 of 26) 751 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_139_118_-0.057571729908628_6.86603189835363_0.316006409499609 chr15 101369409 101370354 + 0.316006409499609 NA TTS (NR_035462) TTS (NR_035462) 244 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding common_peak2_139_118_-0.057571729908628_6.86603189835363_0.316006409499609 chr5 35669541 35671291 + 0.316006409499609 NA intron (NM_001042615, intron 2 of 6) intron (NM_001042615, intron 2 of 6) 9364 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_81_64_0.0485917545719836_6.04666369031445_0.315949812664558-3 chr8 34053822 34054705 + 0.315949812664558 NA Intergenic Intergenic 53551 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_81_64_0.0485917545719836_6.04666369031445_0.315949812664558 chr4 149426033 149426590 + 0.315949812664558 NA 5' UTR (NM_022022, exon 1 of 27) 5' UTR (NM_022022, exon 1 of 27) 320 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak2_77_67_-0.0881440441410151_6.04339081917983_0.315949812664558 chr11 97415584 97416238 + 0.315949812664558 NA Intergenic CpG -34249 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_81_64_0.0485917545719836_6.04666369031445_0.315949812664558-2 chr17 25985189 25986285 + 0.315949812664558 NA promoter-TSS (NR_151779) promoter-TSS (NR_151779) 59 NR_151779 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak1_81_64_0.0485917545719836_6.04666369031445_0.315949812664558 chr16 35983434 35983906 + 0.315949812664558 NA intron (NM_008465, intron 1 of 13) CpG 307 NM_008465 16646 Mm.3991 NM_008465 ENSMUSG00000022905 Kpna1 AW494490|IPOA5|NPI1|Rch2|mSRP1 karyopherin (importin) alpha 1 protein-coding common_peak1_77_67_-0.0881440441410151_6.04339081917983_0.315949812664558 chr2 180589499 180590146 + 0.315949812664558 NA intron (NM_031373, intron 1 of 6) intron (NM_031373, intron 1 of 6) 415 NM_031373 72075 Mm.250418 NM_031373 ENSMUSG00000049401 Ogfr 2010013E17Rik opioid growth factor receptor protein-coding common_peak2_145_115_0.0393794608651108_6.87767072556013_0.315878393438608 chr6 71271732 71272578 + 0.315878393438608 NA TTS (NR_106192) TTS (NR_106192) 136 NM_145568 57896 Mm.250569 NM_145568 ENSMUSG00000053012 Krcc1 AA792894 lysine-rich coiled-coil 1 protein-coding common_peak2_140_119_-0.0594486696522534_6.87716626078239_0.315878393438608-2 chr4 88949342 88950614 + 0.315878393438608 NA Intergenic Intergenic -7936 NR_132735 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak2_140_119_-0.0594486696522534_6.87716626078239_0.315878393438608 chr10 71128322 71130076 + 0.315878393438608 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 30491 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak1_140_119_-0.0594486696522534_6.87716626078239_0.315878393438608 chr1 43239854 43242150 + 0.315878393438608 NA Intergenic Intergenic -44241 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_320_267_-0.0401425307744034_8.04601792507057_0.315835808026162 chr15 78842411 78844799 + 0.315835808026162 NA intron (NM_027219, intron 1 of 2) intron (NM_027219, intron 1 of 2) 958 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak1_227_181_0.0280944574274171_7.52184186891241_0.315822499683116 chr15 81399087 81400967 + 0.315822499683116 NA promoter-TSS (NM_001347075) promoter-TSS (NM_001347075) -111 NM_177310 321003 Mm.390833 NM_177310 ENSMUSG00000022401 Xpnpep3 APP3|E430012M05Rik X-prolyl aminopeptidase 3, mitochondrial protein-coding common_peak1_141_120_-0.0612974751411066_6.88821449970404_0.315752547455812 chr1 134077619 134078980 + 0.315752547455812 NA intron (NM_007570, intron 1 of 1) intron (NM_007570, intron 1 of 1) 856 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_146_116_0.03677404643686_6.88875174280184_0.315752547455812 chr1 118388962 118390840 + 0.315752547455812 NA intron (NM_001359330, intron 1 of 39) intron (NM_001359330, intron 1 of 39) 843 NM_001359334 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak1_82_65_0.0439295015324648_6.06635887012469_0.315725416160752-2 chr5 115572000 115573295 + 0.315725416160752 NA intron (NM_172719, intron 2 of 57) Tigger15a|DNA|TcMar-Tigger 7384 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak1_82_65_0.0439295015324648_6.06635887012469_0.315725416160752 chr10 79682158 79682893 + 0.315725416160752 NA exon (NM_177613, exon 1 of 5) exon (NM_177613, exon 1 of 5) 330 NM_001359817 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|E2-CDC34|UBE2R1 cell division cycle 34 protein-coding common_peak1_78_68_-0.0909567905028927_6.06304606152672_0.315725416160752 chr3 95433908 95435073 + 0.315725416160752 NA promoter-TSS (NM_009709) promoter-TSS (NM_009709) 100 NM_001037737 11863 Mm.250265 NM_009709 ENSMUSG00000015522 Arnt D3Ertd557e|Drnt|ESTM42|Hif1b|W08714|bHLHe2|mKIAA4051 aryl hydrocarbon receptor nuclear translocator protein-coding common_peak1_82_65_0.0439295015324648_6.06635887012469_0.315725416160752-3 chr9 22389288 22390094 + 0.315725416160752 NA promoter-TSS (NM_028390) promoter-TSS (NM_028390) -485 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak2_230_183_0.0310531187683862_7.53908851544121_0.315663002059505 chr11 98958975 98962250 + 0.315663002059505 NA 5' UTR (NM_001176528, exon 1 of 8) 5' UTR (NM_001176528, exon 1 of 8) 141 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_230_183_0.0310531187683862_7.53908851544121_0.315663002059505 chr8 94983988 94985725 + 0.315663002059505 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 457 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_147_117_0.0342077325491124_6.8997469156364_0.315628816833004 chr1 132335681 132336473 + 0.315628816833004 NA Intergenic Intergenic 19952 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_225_189_-0.0465878862439411_7.54656166520898_0.315584536186344 chr7 66366215 66368106 + 0.315584536186344 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 14564 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-3 chr15 27379173 27379619 + 0.315509160416417 NA Intergenic Intergenic -87281 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-5 chr15 97820672 97821238 + 0.315509160416417 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -6092 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417 chr8 24365141 24365507 + 0.315509160416417 NA Intergenic Intergenic 73622 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-6 chr17 57011593 57011973 + 0.315509160416417 NA promoter-TSS (NM_133801) promoter-TSS (NM_133801) -495 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-2 chr11 87737578 87738015 + 0.315509160416417 NA intron (NR_149756, intron 1 of 5) CpG 245 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-2 chr11 96294785 96295277 + 0.315509160416417 NA intron (NR_131758, intron 1 of 2) intron (NR_131758, intron 1 of 2) -4043 NM_008269 15414 Mm.215 NM_008269 ENSMUSG00000000690 Hoxb6 Hox-2.2 homeobox B6 protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-12 chr5 112326357 112326636 + 0.315509160416417 NA intron (NM_018783, intron 1 of 13) CpG 127 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-7 chr17 45944521 45944887 + 0.315509160416417 NA Intergenic Intergenic -63252 NR_152136 75154 Mm.399341 NR_152136 4930542M03Rik - RIKEN cDNA 4930542M03 gene ncRNA common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-5 chr17 14979022 14979438 + 0.315509160416417 NA promoter-TSS (NM_001123367).3 promoter-TSS (NM_001123367).3 366 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-11 chr2 144173813 144174433 + 0.315509160416417 NA non-coding (NR_136884, exon 4 of 4) non-coding (NR_136884, exon 4 of 4) 15167 NR_136884 433481 Mm.330630 NR_136884 ENSMUSG00000074758 Gm5535 EG433481 predicted gene 5535 ncRNA common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417 chr1 150100143 150100547 + 0.315509160416417 NA promoter-TSS (NR_015466) promoter-TSS (NR_015466) 314 NM_011198 19225 Mm.292547 NM_011198 ENSMUSG00000032487 Ptgs2 COX2|Cox-2|PES-2|PGHS-2|PHS II|PHS-2|Pghs2|TIS10|gripghs prostaglandin-endoperoxide synthase 2 protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-10 chr2 125247675 125248144 + 0.315509160416417 NA intron (NM_023595, intron 1 of 5) CpG 394 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-17 chr9 124281675 124282167 + 0.315509160416417 NA Intergenic Intergenic 30773 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-9 chr2 121171349 121171779 + 0.315509160416417 NA promoter-TSS (NM_001290819) promoter-TSS (NM_001290819) 396 NM_001290824 51885 Mm.383499 NM_153387 ENSMUSG00000027263 Tubgcp4 4932441P04Rik|76p|D2Ertd435e|GCP-4 tubulin, gamma complex associated protein 4 protein-coding common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-7 chr6 72487625 72488326 + 0.315509160416417 NA Intergenic Intergenic -48417 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-15 chr9 22467652 22468315 + 0.315509160416417 NA intron (NM_018739, intron 1 of 5) CpG 373 NM_018739 55934 Mm.38235 NM_018739 ENSMUSG00000032239 Rp9 PAP-1|Rp9h retinitis pigmentosa 9 (human) protein-coding common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417 chr10 68247148 68247514 + 0.315509160416417 NA intron (NM_023598, intron 2 of 9) intron (NM_023598, intron 2 of 9) 31395 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-6 chr17 14979022 14979453 + 0.315509160416417 NA promoter-TSS (NM_001123367).3 promoter-TSS (NM_001123367).3 373 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-14 chr7 142362005 142362494 + 0.315509160416417 NA intron (NM_001347541, intron 2 of 2) intron (NM_001347541, intron 2 of 2) 10010 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-13 chr6 146674819 146675173 + 0.315509160416417 NA Intergenic Intergenic 17778 NR_046277 74925 Mm.386304 NR_046277 ENSMUSG00000085238 4930479D17Rik - RIKEN cDNA 4930479D17 gene ncRNA common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-3 chr13 34715862 34716275 + 0.315509160416417 NA Intergenic Intergenic -23574 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-8 chr19 45010090 45010687 + 0.315509160416417 NA intron (NM_001348254, intron 3 of 4) intron (NM_001348254, intron 3 of 4) 1271 NM_001348259 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-4 chr15 68362304 68362644 + 0.315509160416417 NA Intergenic Intergenic -21185 NR_029718 387228 NR_029718 ENSMUSG00000065437 Mir30d Mirn30d|mir-30d|mmu-mir-30d microRNA 30d ncRNA common_peak1_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-4 chr16 91728046 91728637 + 0.315509160416417 NA intron (NM_026994, intron 1 of 11) intron (NM_026994, intron 1 of 11) 461 NM_026994 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding common_peak2_34_31_-0.148644007454196_4.9256779962729_0.315509160416417-16 chr9 67045686 67046179 + 0.315509160416417 NA intron (NM_001164249, intron 2 of 8) intron (NM_001164249, intron 2 of 8) -2061 NM_001164256 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-13 chr9 21287388 21287894 + 0.315509160416411 NA TTS (NM_009878) TTS (NM_009878) 328 NM_145416 215194 Mm.290690 NM_145416 ENSMUSG00000035047 Kri1 - KRI1 homolog protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411 chr1 134455554 134455971 + 0.315509160416411 NA intron (NM_001311136, intron 1 of 11) CpG 231 NM_001311136 240756 Mm.87398 NM_153128 ENSMUSG00000026455 Klhl12 C3ip1 kelch-like 12 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-9 chr4 121016703 121017230 + 0.315509160416411 NA 5' UTR (NM_133716, exon 1 of 10) 5' UTR (NM_133716, exon 1 of 10) 281 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding unique_peak1_37_29_0.0622728589366286_4.93802702507683_0.315509160416411 chr16 92553235 92553587 + 0.315509160416411 NA Intergenic Intergenic 55264 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-6 chr16 65562176 65562682 + 0.315509160416411 NA intron (NM_026879, intron 1 of 5) CpG 268 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-2 chr1 149862239 149862803 + 0.315509160416411 NA intron (NM_008869, intron 12 of 17) intron (NM_008869, intron 12 of 17) 59918 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak1_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-4 chr2 25210984 25211435 + 0.315509160416411 NA exon (NM_021393, exon 1 of 13) exon (NM_021393, exon 1 of 13) 280 NM_021393 58202 Mm.116418 NM_021393 ENSMUSG00000013465 Nelfb A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b negative elongation factor complex member B protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-3 chr11 113266499 113267078 + 0.315509160416411 NA intron (NM_027216, intron 7 of 9) intron (NM_027216, intron 7 of 9) -57119 NR_040276 319871 Mm.383743 NR_040276 ENSMUSG00000085421 4732490B19Rik - RIKEN cDNA 4732490B19 gene ncRNA common_peak1_37_29_0.0622728589366286_4.93802702507683_0.315509160416411 chr1 34111396 34111986 + 0.315509160416411 NA intron (NM_001276764, intron 5 of 102) intron (NM_001276764, intron 5 of 102) -5668 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-9 chr4 59003308 59003761 + 0.315509160416411 NA exon (NM_001033165, exon 1 of 4) exon (NM_001033165, exon 1 of 4) 341 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-5 chr12 86878585 86878999 + 0.315509160416411 NA Intergenic Intergenic 6022 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-5 chr3 36152298 36153224 + 0.315509160416411 NA intron (NM_001101478, intron 1 of 3) intron (NM_001101478, intron 1 of 3) 1681 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-4 chr13 12649659 12650259 + 0.315509160416411 NA non-coding (NR_003568, exon 1 of 7) non-coding (NR_003568, exon 1 of 7) 436 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik G protein-coupled receptor 137B, pseudogene pseudo common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-11 chr7 28435549 28435932 + 0.315509160416411 NA intron (NM_175021, intron 1 of 12) intron (NM_175021, intron 1 of 12) 451 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-3 chr16 10973814 10974306 + 0.315509160416411 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 19061 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-12 chr8 46211210 46211592 + 0.315509160416411 NA promoter-TSS (NM_007450) promoter-TSS (NM_007450) -339 NM_007450 11739 Mm.16228 NM_007450 ENSMUSG00000031633 Slc25a4 AU019225|Ant1|mANC1 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-12 chr8 10965146 10965423 + 0.315509160416411 NA Intergenic Intergenic -36827 NR_135302 665306 Mm.358758 NR_030715 ENSMUSG00000038917 3930402G23Rik - RIKEN cDNA 3930402G23 gene ncRNA common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-7 chr2 35477530 35478428 + 0.315509160416411 NA Intergenic Intergenic -16530 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-3 chr12 8640779 8641063 + 0.315509160416411 NA Intergenic CpG -33213 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411 chr1 91817111 91817311 + 0.315509160416411 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 15750 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak1_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-2 chr1 87840882 87841422 + 0.315509160416411 NA intron (NM_009118, intron 14 of 15) intron (NM_009118, intron 14 of 15) -12135 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-9 chr3 37936564 37937263 + 0.315509160416411 NA intron (NR_040559, intron 2 of 3) MIR|SINE|MIR 38100 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-2 chr11 4895400 4895938 + 0.315509160416411 NA intron (NM_172438, intron 1 of 19) CpG 326 NM_172438 107829 Mm.28969 NM_172438 ENSMUSG00000034274 Thoc5 1700060C24Rik|A430085L24Rik|Fmip|PK1.3|Sgk2 THO complex 5 protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-8 chr2 167866430 167866832 + 0.315509160416411 NA Intergenic Intergenic -65696 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-10 chr6 117906074 117906483 + 0.315509160416411 NA promoter-TSS (NM_001166431) promoter-TSS (NM_001166431) -504 NM_001166430 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-4 chr12 108792383 108792663 + 0.315509160416411 NA promoter-TSS (NM_009537) promoter-TSS (NM_009537) -788 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-11 chr7 97400160 97400570 + 0.315509160416411 NA intron (NM_024220, intron 1 of 2) CpG 362 NM_024220 68197 Mm.334031 NM_024220 ENSMUSG00000030647 Ndufc2 1810004I06Rik|2010300P09Rik|G1|R75094 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-12 chr8 24579041 24579489 + 0.315509160416411 NA Intergenic Intergenic -2932 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411 chr1 64928270 64928959 + 0.315509160416411 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 28210 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-8 chr3 142700327 142700854 + 0.315509160416411 NA promoter-TSS (NM_001293560) promoter-TSS (NM_001293560) -458 NM_173763 229905 Mm.289643 NM_173763 ENSMUSG00000040213 Kyat3 Ccbl2|KATIII|Kat3 kynurenine aminotransferase 3 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-5 chr15 51951884 51952146 + 0.315509160416411 NA Intergenic Intergenic 39745 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding unique_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411 chr3 126047110 126047887 + 0.315509160416411 NA Intergenic Intergenic -108846 NR_149311 22239 Mm.306021 NM_011674 ENSMUSG00000032854 Ugt8a AI850488|AW455908|Cgt|Ugt8|mCerGT UDP galactosyltransferase 8A protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-7 chr19 46689914 46690203 + 0.315509160416411 NA exon (NM_025563, exon 1 of 5) exon (NM_025563, exon 1 of 5) 152 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-10 chr5 24586785 24587136 + 0.315509160416411 NA 5' UTR (NM_133913, exon 1 of 4) 5' UTR (NM_133913, exon 1 of 4) 210 NM_133913 100910 Mm.140672 NM_133913 ENSMUSG00000038181 Chpf2 2010209O12Rik|AW060945|Gm42230|mKIAA1402|mir-671 chondroitin polymerizing factor 2 protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-13 chr8 107198318 107198602 + 0.315509160416411 NA Intergenic Intergenic 47799 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-3 chr1 153300739 153301254 + 0.315509160416411 NA intron (NM_010683, intron 1 of 27) intron (NM_010683, intron 1 of 27) 31790 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-6 chr17 8283919 8284505 + 0.315509160416411 NA intron (NM_018819, intron 1 of 3) CpG 399 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak2_37_29_0.0622728589366286_4.93802702507683_0.315509160416411-7 chr17 80289623 80290025 + 0.315509160416411 NA promoter-TSS (NM_194269) promoter-TSS (NM_194269) -388 NM_194269 378462 Mm.45208 NM_194269 ENSMUSG00000045257 Morn2 Mopt MORN repeat containing 2 protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-2 chr1 149862350 149862789 + 0.315509160416411 NA intron (NM_008869, intron 12 of 17) intron (NM_008869, intron 12 of 17) 59870 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-6 chr15 97705701 97706202 + 0.315509160416411 NA promoter-TSS (NM_028003) promoter-TSS (NM_028003) -129 NM_028003 71919 Mm.12255 NM_028003 ENSMUSG00000022466 Rpap3 2310042P20Rik|D15Ertd682e RNA polymerase II associated protein 3 protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-8 chr2 164438576 164438955 + 0.315509160416411 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 4423 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-11 chr6 38642358 38642739 + 0.315509160416411 NA Intergenic Intergenic -5309 NM_001033171 74253 Mm.121859 NM_001033171 ENSMUSG00000071537 Klrg2 2310020F24Rik killer cell lectin-like receptor subfamily G, member 2 protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-10 chr5 139015382 139015828 + 0.315509160416411 NA Intergenic Intergenic -20652 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-4 chr1 156069601 156070052 + 0.315509160416411 NA TTS (NM_001358627) TTS (NM_001358627) 28965 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak1_36_29_0.0240701454489232_4.91892566833298_0.315509160416411-5 chr16 34958203 34958808 + 0.315509160416411 NA intron (NR_045722, intron 1 of 2) intron (NR_045722, intron 1 of 2) 359 NR_045722 278725 Mm.436927 NR_045722 E130310I04Rik A930019C19Rik RIKEN cDNA E130310I04 gene ncRNA common_peak2_79_69_-0.0936960331197803_6.08243500038508_0.315507670109565-2 chr8 122149119 122149868 + 0.315507670109565 NA Intergenic Intergenic -132648 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_83_66_0.039390525988364_6.08578445345195_0.315507670109565 chr17 44708496 44709824 + 0.315507670109565 NA intron (NM_001271627, intron 4 of 7) intron (NM_001271627, intron 4 of 7) 27016 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_79_69_-0.0936960331197803_6.08243500038508_0.315507670109565 chr8 121632175 121632857 + 0.315507670109565 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 19417 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_80_69_-0.0759005638173527_6.09133273503629_0.315507670109565-3 chr12 110591009 110591640 + 0.315507670109565 NA promoter-TSS (NR_033340) promoter-TSS (NR_033340) -50 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA common_peak2_79_69_-0.0936960331197803_6.08243500038508_0.315507670109565 chr19 47852958 47853869 + 0.315507670109565 NA Intergenic Intergenic -1560 NM_010362 14873 Mm.378931 NM_010362 ENSMUSG00000025068 Gsto1 AA407097|AI194287|AU018802|Gsto-1|Gstx|Spg-r|p28 glutathione S-transferase omega 1 protein-coding common_peak1_80_69_-0.0759005638173527_6.09133273503629_0.315507670109565 chr4 83485489 83486689 + 0.315507670109565 NA intron (NM_001355203, intron 1 of 10) CpG-10005 374 NM_001290527 101739 Mm.105331 NM_133948 ENSMUSG00000028484 Psip1 AA408851|AU015605|Dfs70|Ledgfa|Ledgfb|Psip2 PC4 and SFRS1 interacting protein 1 protein-coding common_peak1_83_66_0.039390525988364_6.08578445345195_0.315507670109565-3 chr4 139599333 139600655 + 0.315507670109565 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) -22900 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak2_80_69_-0.0759005638173527_6.09133273503629_0.315507670109565 chr11 69059714 69060513 + 0.315507670109565 NA exon (NM_028005, exon 1 of 1) exon (NM_028005, exon 1 of 1) 338 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding common_peak2_80_69_-0.0759005638173527_6.09133273503629_0.315507670109565-4 chr8 111853656 111854297 + 0.315507670109565 NA intron (NM_011801, intron 1 of 6) CpG 334 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding common_peak1_83_66_0.039390525988364_6.08578445345195_0.315507670109565-2 chr19 33391554 33392444 + 0.315507670109565 NA 5' UTR (NM_001167818, exon 1 of 7) 5' UTR (NM_001167818, exon 1 of 7) 296 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak2_80_69_-0.0759005638173527_6.09133273503629_0.315507670109565-2 chr11 114668622 114669639 + 0.315507670109565 NA intron (NM_001048058, intron 2 of 3) intron (NM_001048058, intron 2 of 3) 349 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding common_peak1_148_118_0.0316796332173226_6.91065757991661_0.315507148676085-2 chr15 6387377 6388694 + 0.315507148676085 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 1287 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak1_148_118_0.0316796332173226_6.91065757991661_0.315507148676085-3 chr3 121902749 121903786 + 0.315507148676085 NA Intergenic Intergenic -49962 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_143_122_-0.0649132158130232_6.91005789743273_0.315507148676085 chr9 63756676 63757908 + 0.315507148676085 NA intron (NM_016769, intron 1 of 8) CpG 702 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_149_118_0.0412617214985751_6.91544862405723_0.315507148676085 chr8 107490210 107491251 + 0.315507148676085 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) 54332 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_148_118_0.0316796332173226_6.91065757991661_0.315507148676085 chr1 162739627 162740517 + 0.315507148676085 NA intron (NM_001081290, intron 1 of 34) CpG 484 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding common_peak2_143_122_-0.0649132158130232_6.91005789743273_0.315507148676085 chr8 11260136 11260913 + 0.315507148676085 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -52281 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_148_118_0.0316796332173226_6.91065757991661_0.315507148676085 chr17 80754511 80756253 + 0.315507148676085 NA Intergenic Intergenic -27357 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_148_118_0.0316796332173226_6.91065757991661_0.315507148676085-4 chr9 120933942 120935210 + 0.315507148676085 NA intron (NM_007614, intron 1 of 14) intron (NM_007614, intron 1 of 14) 998 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak1_234_186_0.0323137830218077_7.56305135139854_0.315430102249358 chr5 123907265 123908938 + 0.315430102249358 NA 5' UTR (NM_026603, exon 2 of 8) 5' UTR (NM_026603, exon 2 of 8) 826 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak2_84_67_0.034969935266747_6.10494780888371_0.315296283155016 chr11 117848199 117849042 + 0.315296283155016 NA promoter-TSS (NM_009689) promoter-TSS (NM_009689) -617 NM_001012273 11799 Mm.8552 NM_009689 ENSMUSG00000017716 Birc5 AAC-11|Api4|TIAP|survivin40 baculoviral IAP repeat-containing 5 protein-coding common_peak1_85_67_0.0517247093858497_6.11332519594326_0.315296283155016-3 chr18 35598663 35599097 + 0.315296283155016 NA intron (NM_001357471, intron 1 of 3) CpG 263 NM_001357472 67869 Mm.126534 NM_026420 ENSMUSG00000037058 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 protein-coding common_peak1_85_67_0.0517247093858497_6.11332519594326_0.315296283155016-2 chr17 35776306 35777166 + 0.315296283155016 NA intron (NR_045459, intron 1 of 2) intron (NR_045459, intron 1 of 2) 4286 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak2_81_70_-0.0787875519042442_6.11035334355256_0.315296283155016 chr11 93955192 93955775 + 0.315296283155016 NA intron (NM_001077529, intron 1 of 3) CpG 300 NM_001077529 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding common_peak1_81_70_-0.0787875519042442_6.11035334355256_0.315296283155016-2 chr4 84674132 84674869 + 0.315296283155016 NA intron (NM_172870, intron 1 of 5) CpG 586 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak1_85_67_0.0517247093858497_6.11332519594326_0.315296283155016 chr10 13192715 13193246 + 0.315296283155016 NA intron (NM_181470, intron 1 of 10) CpG 157 NM_181470 353258 Mm.117581 NM_181470 ENSMUSG00000019814 Ltv1 2610020N02Rik LTV1 ribosome biogenesis factor protein-coding common_peak2_85_67_0.0517247093858497_6.11332519594326_0.315296283155016-2 chr18 62016027 62016765 + 0.315296283155016 NA TTS (NM_172628) TTS (NM_172628) 63321 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak2_85_67_0.0517247093858497_6.11332519594326_0.315296283155016 chr13 45965217 45966181 + 0.315296283155016 NA promoter-TSS (NM_009124) promoter-TSS (NM_009124) -708 NM_009124 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_81_70_-0.0787875519042442_6.11035334355256_0.315296283155016-2 chr2 112379272 112380430 + 0.315296283155016 NA intron (NM_024254, intron 1 of 9) intron (NM_024254, intron 1 of 9) 640 NM_024254 72425 Mm.425091 NM_024254 ENSMUSG00000027132 Katnbl1 2410042D21Rik|AA166487|AA473307|AI467442 katanin p80 subunit B like 1 protein-coding common_peak1_81_70_-0.0787875519042442_6.11035334355256_0.315296283155016 chr11 78182811 78183552 + 0.315296283155016 NA promoter-TSS (NR_037683) promoter-TSS (NR_037683) -68 NR_037683 100529077 NR_037683 Snord42b MBII-287|U42B small nucleolar RNA, C/D box 42B snoRNA common_peak2_84_67_0.034969935266747_6.10494780888371_0.315296283155016-2 chr19 46500832 46501488 + 0.315296283155016 NA promoter-TSS (NM_053100) promoter-TSS (NM_053100) -488 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_81_70_-0.0787875519042442_6.11035334355256_0.315296283155016-3 chr6 72347172 72348123 + 0.315296283155016 NA exon (NM_026696, exon 2 of 4) exon (NM_026696, exon 2 of 4) 330 NM_026696 68364 Mm.52711 NM_026696 ENSMUSG00000058706 0610030E20Rik 1500031N04Rik|2810411C16Rik|AI461894 RIKEN cDNA 0610030E20 gene protein-coding common_peak1_81_70_-0.0787875519042442_6.11035334355256_0.315296283155016-3 chrX 103980352 103981173 + 0.315296283155016 NA intron (NM_001358205, intron 1 of 4) CpG 523 NM_001358205 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding common_peak1_85_67_0.0517247093858497_6.11332519594326_0.315296283155016-4 chr2 113376659 113377300 + 0.315296283155016 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 49243 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_151_120_0.0361902581240638_6.93695836633663_0.315269796857464 chr2 109693636 109694675 + 0.315269796857464 NA promoter-TSS (NM_001316310) promoter-TSS (NM_001316310) -254 NM_001316310 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak2_146_124_-0.0586455186418222_6.93646152534118_0.315269796857464 chr4 59314235 59316597 + 0.315269796857464 NA intron (NM_001163288, intron 16 of 16) intron (NM_001163288, intron 16 of 16) 55365 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_152_121_0.0337097446552308_6.9475922098905_0.31515401586975 chr11 120632105 120633836 + 0.31515401586975 NA intron (NM_010756, intron 1 of 2) CpG 577 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak2_147_125_-0.0604291415889628_6.94706535270543_0.31515401586975 chr8 94837690 94838802 + 0.31515401586975 NA promoter-TSS (NM_026452) promoter-TSS (NM_026452) 94 NM_134141 109006 Mm.27582 NM_134141 ENSMUSG00000031781 Ciapin1 2810413N20Rik|AA617265|AU021794|anamorsin cytokine induced apoptosis inhibitor 1 protein-coding common_peak2_152_121_0.0337097446552308_6.9475922098905_0.31515401586975-3 chr3 121902864 121903832 + 0.31515401586975 NA Intergenic Intergenic -49881 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak2_152_121_0.0337097446552308_6.9475922098905_0.31515401586975-2 chr18 75342090 75343558 + 0.31515401586975 NA Intergenic CpG 24264 NR_155535 102636262 Mm.421168 NR_155535 Gm20544 - predicted gene 20544 ncRNA common_peak1_147_125_-0.0604291415889628_6.94706535270543_0.31515401586975 chr6 112209521 112210697 + 0.31515401586975 NA promoter-TSS (NR_027865) promoter-TSS (NR_027865) -599 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA common_peak2_82_71_-0.081601380551394_6.12912431116662_0.315090980716576-3 chr2 127722763 127723812 + 0.315090980716576 NA intron (NM_145532, intron 1 of 3) intron (NM_145532, intron 1 of 3) 6610 NM_145532 228576 Mm.133036 NM_145532 ENSMUSG00000027377 Mall BC012256|BENE mal, T cell differentiation protein-like protein-coding common_peak1_86_68_0.0472241668265516_6.13213654019144_0.315090980716576 chr1 130735136 130735988 + 0.315090980716576 NA intron (NM_177604, intron 1 of 3) Lx8|LINE|L1 3586 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak2_86_68_0.0472241668265516_6.13213654019144_0.315090980716576-2 chr8 27042378 27042994 + 0.315090980716576 NA exon (NM_054057, exon 1 of 8) exon (NM_054057, exon 1 of 8) 131 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak1_86_68_0.0472241668265516_6.13213654019144_0.315090980716576-2 chr7 144037548 144038224 + 0.315090980716576 NA Intergenic Intergenic 28632 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_82_71_-0.081601380551394_6.12912431116662_0.315090980716576-2 chr2 83759049 83759764 + 0.315090980716576 NA intron (NM_008402, intron 4 of 29) intron (NM_008402, intron 4 of 29) 35009 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak1_82_71_-0.081601380551394_6.12912431116662_0.315090980716576 chr15 78983079 78983644 + 0.315090980716576 NA intron (NM_001024716, intron 1 of 13) intron (NM_001024716, intron 1 of 13) 305 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding common_peak2_82_71_-0.081601380551394_6.12912431116662_0.315090980716576-2 chr17 65737043 65738206 + 0.315090980716576 NA intron (NM_133685, intron 1 of 6) intron (NM_133685, intron 1 of 6) 35128 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak2_86_68_0.0472241668265516_6.13213654019144_0.315090980716576 chr11 3408277 3409149 + 0.315090980716576 NA intron (NM_010718, intron 1 of 15) intron (NM_010718, intron 1 of 15) 525 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_82_71_-0.081601380551394_6.12912431116662_0.315090980716576 chr10 18055541 18056749 + 0.315090980716576 NA intron (NM_009048, intron 1 of 19) CpG 205 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-3 chr17 88595798 88596497 + 0.315041925765944 NA Intergenic Intergenic -30408 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-8 chr8 109919306 109919992 + 0.315041925765944 NA intron (NM_001122594, intron 9 of 18) intron (NM_001122594, intron 9 of 18) 42556 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-6 chr2 129198808 129199126 + 0.315041925765944 NA 5' UTR (NM_001159593, exon 1 of 6) 5' UTR (NM_001159593, exon 1 of 6) 194 NM_001159593 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-10 chr7 139834440 139834901 + 0.315041925765944 NA intron (NM_177469, intron 1 of 7) intron (NM_177469, intron 1 of 7) 496 NM_177469 52389 Mm.39863 NM_177469 ENSMUSG00000025475 Adgra1 2900059M17Rik|D7Ertd680e|Gpr123 adhesion G protein-coupled receptor A1 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-7 chr4 32409190 32409398 + 0.315041925765944 NA Intergenic Intergenic -8141 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-8 chr4 58189757 58190404 + 0.315041925765944 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 16516 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-5 chr4 32221430 32221855 + 0.315041925765944 NA Intergenic Intergenic -195793 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-7 chr8 94808949 94809617 + 0.315041925765944 NA Intergenic Intergenic -1170 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-2 chr10 17015006 17015594 + 0.315041925765944 NA intron (NR_038020, intron 1 of 8) L2c|LINE|L2 80482 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-2 chr16 4963831 4964169 + 0.315041925765944 NA promoter-TSS (NM_001271586) promoter-TSS (NM_001271586) 237 NM_028301 72615 Mm.290628 NM_028301 ENSMUSG00000022515 Anks3 2700067D09Rik|C81345|mKIAA1977 ankyrin repeat and sterile alpha motif domain containing 3 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-5 chr2 83709178 83709689 + 0.315041925765944 NA Intergenic Intergenic -14964 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-3 chr19 26747148 26748001 + 0.315041925765944 NA promoter-TSS (NM_026003) promoter-TSS (NM_026003) -591 NM_001347439 67155 Mm.491146 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-11 chr8 89037569 89038223 + 0.315041925765944 NA intron (NM_021390, intron 2 of 3) intron (NM_021390, intron 2 of 3) 6266 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-4 chr18 8127374 8128050 + 0.315041925765944 NA Intergenic Intergenic 257999 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944 chr1 134079428 134079723 + 0.315041925765944 NA promoter-TSS (NM_007570) promoter-TSS (NM_007570) -420 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-9 chr8 111876327 111876696 + 0.315041925765944 NA exon (NM_025781, exon 1 of 3) exon (NM_025781, exon 1 of 3) 164 NM_025781 66817 Mm.345350 NM_025781 ENSMUSG00000031953 Tmem170 9030409E16Rik|AA403674|D8Bwg1414e|Tmem170a transmembrane protein 170 protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944 chr15 85542396 85543113 + 0.315041925765944 NA intron (NM_009528, intron 3 of 3) L2c|LINE|L2 35316 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-4 chr19 36083322 36083933 + 0.315041925765944 NA promoter-TSS (NM_019428) promoter-TSS (NM_019428) -89 NM_019428 54364 Mm.277891 NM_019428 ENSMUSG00000024800 Rpp30 Rnasep2|TSG15 ribonuclease P/MRP 30 subunit protein-coding common_peak1_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-6 chr6 113692248 113692550 + 0.315041925765944 NA intron (NM_001113553, intron 11 of 11) intron (NM_001113553, intron 11 of 11) -4651 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944-9 chr4 155760758 155761018 + 0.315041925765944 NA promoter-TSS (NR_027971) promoter-TSS (NR_027971) 210 NM_179203 108888 Mm.241152 NM_179203 ENSMUSG00000029036 Atad3a 2400004H09Rik|Atad3|Tob3|mKIAA1273 ATPase family, AAA domain containing 3A protein-coding unique_peak2_35_32_-0.152682870685749_4.96805268401558_0.315041925765944 chr18 82491499 82492126 + 0.315041925765944 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 16689 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-4 chr2 151740741 151741168 + 0.315041925765932 NA intron (NM_212446, intron 1 of 6) CpG 356 NM_212446 228769 Mm.146984 NM_144889 ENSMUSG00000032869 Psmf1 AW048666|BC012260|PI31 proteasome (prosome, macropain) inhibitor subunit 1 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-4 chr15 6564662 6564917 + 0.315041925765932 NA Intergenic Intergenic -15058 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Fyb1|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-12 chr8 122526839 122527173 + 0.315041925765932 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 24323 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-7 chr3 32365462 32365759 + 0.315041925765932 NA promoter-TSS (NM_009517) promoter-TSS (NM_009517) 55 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-3 chr18 75860697 75861144 + 0.315041925765932 NA intron (NM_145356, intron 1 of 4) intron (NM_145356, intron 1 of 4) 40742 NM_145356 207259 Mm.159332 NM_145356 ENSMUSG00000044646 Zbtb7c B230208J24Rik|Kr-pok|Zbtb36 zinc finger and BTB domain containing 7C protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-6 chr3 58418626 58419414 + 0.315041925765932 NA intron (NM_001347233, intron 1 of 2) intron (NM_001347233, intron 1 of 2) 4300 NM_001347233 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-2 chr17 25833134 25833421 + 0.315041925765932 NA promoter-TSS (NM_019719) promoter-TSS (NM_019719) 84 NM_019719 56424 Mm.277599 NM_019719 ENSMUSG00000039615 Stub1 0610033N24Rik|2210017D18Rik|2310040B03Rik|AW046544|Chip STIP1 homology and U-Box containing protein 1 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-10 chr8 60759536 60760283 + 0.315041925765932 NA Intergenic Intergenic 104352 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-5 chr3 51221227 51221626 + 0.315041925765932 NA Intergenic Intergenic -3021 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-9 chr8 31522740 31523335 + 0.315041925765932 NA Intergenic MER53|DNA|hAT 155288 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932 chr15 31186572 31187008 + 0.315041925765932 NA Intergenic Intergenic -37595 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-3 chr13 65278289 65278704 + 0.315041925765932 NA promoter-TSS (NM_178364) promoter-TSS (NM_178364) -358 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-8 chr4 48124947 48125443 + 0.315041925765932 NA intron (NM_026343, intron 1 of 7) CpG 276 NM_026343 67727 Mm.171334 NM_026343 ENSMUSG00000061455 Stx17 4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351 syntaxin 17 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-9 chr8 46211177 46211605 + 0.315041925765932 NA promoter-TSS (NM_007450) promoter-TSS (NM_007450) -329 NM_007450 11739 Mm.16228 NM_007450 ENSMUSG00000031633 Slc25a4 AU019225|Ant1|mANC1 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932 chr1 40440030 40440748 + 0.315041925765932 NA intron (NM_001025602, intron 1 of 10) intron (NM_001025602, intron 1 of 10) 760 NM_010743 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-6 chr2 68470880 68471450 + 0.315041925765932 NA intron (NM_016866, intron 1 of 17) CpG 816 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_38_30_0.052177466295694_4.98028504353472_0.315041925765932-7 chr4 32238106 32238614 + 0.315041925765932 NA Intergenic Intergenic -179075 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-11 chr8 119723050 119723611 + 0.315041925765932 NA intron (NM_026922, intron 3 of 26) intron (NM_026922, intron 3 of 26) 23321 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-8 chr4 24496025 24496331 + 0.315041925765932 NA promoter-TSS (NM_199467) promoter-TSS (NM_199467) -273 NR_149739 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-2 chr1 71764044 71764576 + 0.315041925765932 NA Intergenic Intergenic 110975 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak2_38_30_0.052177466295694_4.98028504353472_0.315041925765932-5 chr17 25920225 25920614 + 0.315041925765932 NA promoter-TSS (NM_139154) promoter-TSS (NM_139154) -705 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak2_153_122_0.0312649672587053_6.95814698896859_0.315040102561836 chr12 80945612 80946886 + 0.315040102561836 NA promoter-TSS (NR_045057) promoter-TSS (NR_045057) 750 NM_001347415 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak1_235_197_-0.0440654939034184_7.6073238731279_0.314985858167789 chr8 71272725 71273934 + 0.314985858167789 NA promoter-TSS (NM_001163042) promoter-TSS (NM_001163042) 615 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_155_123_0.0380675071492051_6.97323006396148_0.314928012102352 chr10 60830128 60831498 + 0.314928012102352 NA intron (NM_029770, intron 1 of 16) CpG 768 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_150_127_-0.0544020957429607_6.97279895212852_0.314928012102352 chr2 126931949 126933661 + 0.314928012102352 NA intron (NM_023220, intron 1 of 14) G-rich|Low_complexity|Low_complexity 430 NM_023220 66552 Mm.269928 NM_023220 ENSMUSG00000027366 Sppl2a 2010106G01Rik|C130089K23Rik signal peptide peptidase like 2A protein-coding common_peak2_242_193_0.0272502335946969_7.61353795898448_0.314914468780123 chr19 10561087 10562824 + 0.314914468780123 NA Intergenic Intergenic -5717 NM_026798 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding common_peak1_242_193_0.0272502335946969_7.61353795898448_0.314914468780123 chr8 70896181 70898147 + 0.314914468780123 NA intron (NM_029751, intron 1 of 4) CpG 279 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding common_peak2_83_72_-0.0843448424338815_6.14765213766308_0.314891503798722 chr10 19592045 19592715 + 0.314891503798722 NA intron (NM_010511, intron 1 of 6) intron (NM_010511, intron 1 of 6) 431 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_83_72_-0.0843448424338815_6.14765213766308_0.314891503798722-2 chr2 120608972 120609869 + 0.314891503798722 NA promoter-TSS (NM_025475) promoter-TSS (NM_025475) 38 NM_025475 66296 Mm.221900 NM_025475 ENSMUSG00000027285 Haus2 1700101G24Rik|2410007P03Rik|AU020217|Cep27 HAUS augmin-like complex, subunit 2 protein-coding unique_peak1_87_69_0.0428374060788492_6.15070171998439_0.314891503798722 chr8 22859526 22860455 + 0.314891503798722 NA intron (NM_001081149, intron 1 of 17) CpG 451 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak1_83_72_-0.0843448424338815_6.14765213766308_0.314891503798722 chr16 33251193 33252050 + 0.314891503798722 NA intron (NM_080557, intron 1 of 13) CpG 165 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding common_peak2_83_72_-0.0843448424338815_6.14765213766308_0.314891503798722-3 chr5 115272163 115272881 + 0.314891503798722 NA 5' UTR (NM_016698, exon 1 of 17) 5' UTR (NM_016698, exon 1 of 17) 373 NM_001302448 50849 Mm.30051 NM_016698 ENSMUSG00000041740 Rnf10 AA675014|RIE2|mKIAA0262 ring finger protein 10 protein-coding common_peak1_87_69_0.0428374060788492_6.15070171998439_0.314891503798722 chr8 84857047 84857631 + 0.314891503798722 NA intron (NR_152751, intron 1 of 12) intron (NR_152751, intron 1 of 12) 353 NM_025648 66590 Mm.292517 NM_025648 ENSMUSG00000003808 Farsa 0610012A19Rik|Farsla|pheRS phenylalanyl-tRNA synthetase, alpha subunit protein-coding common_peak2_151_128_-0.0561737600245955_6.98314037541096_0.314817701082392 chr8 64657092 64658726 + 0.314817701082392 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 35200 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_239_200_-0.0416840846995319_7.63020964882916_0.314773858972032 chr8 71272621 71273905 + 0.314773858972032 NA promoter-TSS (NM_001163042) promoter-TSS (NM_001163042) 549 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak2_88_70_0.038560106895245_6.1690271729523_0.314697607900733 chr13 45960479 45961808 + 0.314697607900733 NA intron (NM_001199304, intron 1 of 6) intron (NM_001199304, intron 1 of 6) 3848 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_85_73_-0.0702658149927613_6.17432045813257_0.314697607900733-2 chr8 94857480 94858002 + 0.314697607900733 NA intron (NM_009090, intron 1 of 8) CpG 291 NM_009090 20021 Mm.292492 NM_009090 ENSMUSG00000031783 Polr2c 33kDa|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C protein-coding common_peak2_85_73_-0.0702658149927613_6.17432045813257_0.314697607900733 chr18 75492903 75493465 + 0.314697607900733 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -21461 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_84_73_-0.0870205891118641_6.16594307107302_0.314697607900733 chr11 78512328 78512910 + 0.314697607900733 NA promoter-TSS (NM_199199) promoter-TSS (NM_199199) 323 NM_026389 67811 Mm.197493 NM_026389 ENSMUSG00000001100 Poldip2 1300003F06Rik|Pdip38 polymerase (DNA-directed), delta interacting protein 2 protein-coding common_peak1_88_70_0.038560106895245_6.1690271729523_0.314697607900733 chr15 11903395 11904481 + 0.314697607900733 NA intron (NM_001286395, intron 2 of 8) CpG 1736 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_88_70_0.038560106895245_6.1690271729523_0.314697607900733-2 chr4 44012683 44013234 + 0.314697607900733 NA exon (NM_001290470, exon 1 of 6) exon (NM_001290470, exon 1 of 6) 308 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak2_84_73_-0.0870205891118641_6.16594307107302_0.314697607900733-2 chr3 121649501 121650215 + 0.314697607900733 NA Intergenic Intergenic -3405 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_84_73_-0.0870205891118641_6.16594307107302_0.314697607900733-3 chr9 89210645 89211575 + 0.314697607900733 NA promoter-TSS (NM_026829) promoter-TSS (NM_026829) -80 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak1_247_197_0.0269829603266842_7.64284810024295_0.314636068631864 chr8 4676980 4678711 + 0.314636068631864 NA Intergenic CpG 64675 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak2_37_33_-0.118299386705192_5.02831314789774_0.314603908022757 chr1 52500487 52500931 + 0.314603908022757 NA promoter-TSS (NM_008667) promoter-TSS (NM_008667) -261 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-3 chr19 61140459 61140775 + 0.314603908022757 NA intron (NM_001001737, intron 1 of 2) intron (NM_001001737, intron 1 of 2) 223 NR_131956 414758 Mm.100056 NM_001001737 ENSMUSG00000074733 Zfp950 5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84 zinc finger protein 950 protein-coding common_peak2_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-5 chr5 123973685 123974266 + 0.314603908022757 NA intron (NM_145070, intron 1 of 31) CpG 347 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-8 chr8 73319795 73320171 + 0.314603908022757 NA intron (NM_010687, intron 1 of 14) intron (NM_010687, intron 1 of 14) 33557 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-3 chr14 76875345 76876030 + 0.314603908022757 NA Intergenic Intergenic 115556 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-7 chr6 125493440 125494165 + 0.314603908022757 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 958 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-6 chr7 45717354 45717940 + 0.314603908022757 NA promoter-TSS (NM_009077) promoter-TSS (NM_009077) 355 NM_203280 56632 Mm.24222 NM_020011 ENSMUSG00000057342 Sphk2 C76851 sphingosine kinase 2 protein-coding common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-6 chr2 91710577 91710835 + 0.314603908022757 NA promoter-TSS (NM_145528) promoter-TSS (NM_145528) -114 NM_001355421 51897 Mm.28492 NM_145528 ENSMUSG00000027244 Atg13 1110053A20Rik|D2Ertd391e|Harbi1 autophagy related 13 protein-coding common_peak2_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-3 chr3 126660101 126660786 + 0.314603908022757 NA intron (NM_001025438, intron 2 of 18) intron (NM_001025438, intron 2 of 18) 63492 NM_001293665 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-5 chr5 146676883 146677437 + 0.314603908022757 NA Intergenic Intergenic -91921 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding common_peak1_37_33_-0.118299386705192_5.02831314789774_0.314603908022757 chr11 115933820 115934169 + 0.314603908022757 NA promoter-TSS (NM_130454) promoter-TSS (NM_130454) 335 NM_020483 57230 Mm.267810 NM_020483 ENSMUSG00000020755 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein protein-coding common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-5 chr18 8125841 8126505 + 0.314603908022757 NA Intergenic Intergenic 256460 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak1_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-6 chr6 82761450 82762116 + 0.314603908022757 NA intron (NM_013820, intron 1 of 17) intron (NM_013820, intron 1 of 17) 12671 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding unique_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757 chr8 12794601 12795165 + 0.314603908022757 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 37036 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-4 chr16 87432105 87432504 + 0.314603908022757 NA intron (NM_001081068, intron 1 of 29) CpG 302 NM_001081068 78913 Mm.249005 NM_001081068 ENSMUSG00000052299 Ltn1 4930528H02Rik|AV266914|C87237|Listerin|Rnf160|Zfp294 listerin E3 ubiquitin protein ligase 1 protein-coding common_peak1_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-5 chr5 115018136 115018628 + 0.314603908022757 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 6858 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-3 chr16 49969977 49970406 + 0.314603908022757 NA Intergenic Intergenic -10269 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-7 chrX 162159126 162159590 + 0.314603908022757 NA promoter-TSS (NM_001081052) promoter-TSS (NM_001081052) 83 NM_001081052 195727 Mm.336313 NM_001081052 ENSMUSG00000059493 Nhs Gm389|Gm48|Nhs1|Xcat NHS actin remodeling regulator protein-coding common_peak1_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-4 chr15 37961270 37961740 + 0.314603908022757 NA promoter-TSS (NM_199476) promoter-TSS (NM_199476) -450 NM_199476 382985 Mm.24738 NM_199476 ENSMUSG00000022292 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding common_peak2_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-4 chr4 150059510 150060077 + 0.314603908022757 NA Intergenic Intergenic -8661 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-2 chr19 28243005 28243479 + 0.314603908022757 NA Intergenic Intergenic -232076 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-2 chr1 86359692 86360146 + 0.314603908022757 NA promoter-TSS (NM_010880) promoter-TSS (NM_010880) 345 NR_015507 319336 Mm.389155 NR_015507 ENSMUSG00000073627 C130036L24Rik - RIKEN cDNA C130036L24 gene ncRNA common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757 chr1 43241725 43242178 + 0.314603908022757 NA Intergenic Intergenic -45190 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-2 chr13 29855164 29855614 + 0.314603908022757 NA intron (NM_001308486, intron 1 of 5) CpG 284 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-2 chr19 4811276 4811579 + 0.314603908022757 NA exon (NM_019869, exon 1 of 3) exon (NM_019869, exon 1 of 3) 207 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding common_peak2_37_33_-0.118299386705192_5.02831314789774_0.314603908022757-6 chr6 50109873 50110468 + 0.314603908022757 NA promoter-TSS (NM_001164734) promoter-TSS (NM_001164734) -71 NM_019939 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-4 chr4 116053587 116054006 + 0.314603908022757 NA promoter-TSS (NM_028142) promoter-TSS (NM_028142) 80 NM_028142 72181 Mm.282560 NM_028142 ENSMUSG00000028706 Nsun4 2310010O12Rik|2810405F18Rik|AI507900|Shtap NOL1/NOP2/Sun domain family, member 4 protein-coding common_peak2_36_33_-0.156502100192897_5.00921179115389_0.314603908022757-9 chr9 26999693 27000246 + 0.314603908022757 NA promoter-TSS (NM_025862) promoter-TSS (NM_025862) 292 NM_001326361 77862 Mm.16925 NM_144543 ENSMUSG00000035443 Thyn1 D730042P09Rik|HSPC144|MDS012|MY105|Thy28 thymocyte nuclear protein 1 protein-coding common_peak1_36_33_-0.156502100192897_5.00921179115389_0.314603908022757 chr19 4045621 4046069 + 0.314603908022757 NA Intergenic Intergenic -3624 NM_181796 14869 Mm.441542 NM_181796 ENSMUSG00000038155 Gstp2 GSTpiA|Gst-3|Gst3 glutathione S-transferase, pi 2 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-9 chr5 109558801 109559057 + 0.314603908022751 NA promoter-TSS (NM_016715) promoter-TSS (NM_016715) 64 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-9 chr9 49534064 49534718 + 0.314603908022751 NA intron (NM_010875, intron 13 of 15) intron (NM_010875, intron 13 of 15) 16103 NR_029465 100036537 Mm.437541 NR_029465 ENSMUSG00000079564 Gm11149 - predicted gene 11149 ncRNA common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-6 chr16 45799200 45799717 + 0.314603908022751 NA intron (NM_153412, intron 5 of 17) intron (NM_153412, intron 5 of 17) 44920 NM_153412 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-12 chr9 107308358 107308807 + 0.314603908022751 NA Intergenic Intergenic 11923 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-8 chr8 8661542 8661879 + 0.314603908022751 NA promoter-TSS (NM_010111) promoter-TSS (NM_010111) -937 NM_010111 13642 Mm.209813 NM_010111 ENSMUSG00000001300 Efnb2 ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1 ephrin B2 protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-4 chr3 51221196 51221582 + 0.314603908022751 NA Intergenic Intergenic -3058 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-5 chr15 7859758 7860353 + 0.314603908022751 NA Intergenic Intergenic 44505 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-2 chr11 101641383 101641792 + 0.314603908022751 NA Intergenic CpG 13638 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-3 chr13 54687866 54688268 + 0.314603908022751 NA promoter-TSS (NM_001146025) promoter-TSS (NM_001146025) 133 NM_001146027 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-7 chr16 87432038 87432452 + 0.314603908022751 NA intron (NM_001081068, intron 1 of 29) CpG 361 NM_001081068 78913 Mm.249005 NM_001081068 ENSMUSG00000052299 Ltn1 4930528H02Rik|AV266914|C87237|Listerin|Rnf160|Zfp294 listerin E3 ubiquitin protein ligase 1 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-2 chr11 103312563 103313570 + 0.314603908022751 NA Intergenic B4A|SINE|B4 31636 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-5 chr4 45452516 45453168 + 0.314603908022751 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -44076 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-8 chr19 53450829 53451145 + 0.314603908022751 NA non-coding (NR_028427, exon 5 of 10) non-coding (NR_028427, exon 5 of 10) 13809 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751 chr1 74013556 74014126 + 0.314603908022751 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 110606 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-7 chr7 13024899 13025483 + 0.314603908022751 NA intron (NM_011588, intron 1 of 16) intron (NM_011588, intron 1 of 16) 1039 NM_011588 21849 Mm.15701 NM_011588 ENSMUSG00000005566 Trim28 AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta tripartite motif-containing 28 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-11 chr8 4259441 4259953 + 0.314603908022751 NA promoter-TSS (NM_183315) promoter-TSS (NM_183315) -423 NM_183315 330695 Mm.34210 NM_183315 ENSMUSG00000048644 Ctxn1 BC028881|Ctxn cortexin 1 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751 chr10 78722631 78723011 + 0.314603908022751 NA Intergenic Intergenic -4528 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-3 chr2 71540012 71540679 + 0.314603908022751 NA intron (NR_039557, intron 2 of 3).2 intron (NR_039557, intron 2 of 3).2 -2454 NR_002854 111970 Mm.4543 NR_002854 Dlx1as Dix1as|Dlx1os distal-less homeobox 1, antisense ncRNA common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-10 chr5 143112605 143113000 + 0.314603908022751 NA intron (NM_080561, intron 1 of 16) CpG 218 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak1_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-4 chr13 94976347 94976611 + 0.314603908022751 NA 5' UTR (NM_172590, exon 1 of 13) 5' UTR (NM_172590, exon 1 of 13) 135 NM_172590 218460 Mm.33856 NM_172590 ENSMUSG00000042015 Wdr41 B830029I03Rik|MSTP048 WD repeat domain 41 protein-coding common_peak2_39_31_0.0426419633984301_5.02132098169922_0.314603908022751-6 chr5 143112569 143112938 + 0.314603908022751 NA intron (NM_080561, intron 1 of 16) CpG 267 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak1_153_130_-0.059643528939505_7.0036012370677_0.314602250511419 chr15 100615600 100616704 + 0.314602250511419 NA intron (NM_011873, intron 1 of 3) CpG 490 NM_011873 23994 Mm.486175 NM_011873 ENSMUSG00000000346 Dazap2 AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058 DAZ associated protein 2 protein-coding common_peak2_153_130_-0.059643528939505_7.0036012370677_0.314602250511419 chr7 43442829 43444435 + 0.314602250511419 NA promoter-TSS (NM_026695) promoter-TSS (NM_026695) -440 NM_026695 110826 Mm.30200 NM_026695 ENSMUSG00000004610 Etfb 0610009I16Rik|2810441H06Rik electron transferring flavoprotein, beta polypeptide protein-coding common_peak2_158_126_0.0308659911519058_7.00411768234812_0.314602250511419 chr11 118160987 118162972 + 0.314602250511419 NA Intergenic Intergenic -32760 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_89_71_0.034388166411027_6.18711908464783_0.31450906201653 chr1 74506090 74507264 + 0.31450906201653 NA promoter-TSS (NM_001310662) promoter-TSS (NM_001310662) 617 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding common_peak1_89_71_0.034388166411027_6.18711908464783_0.31450906201653-2 chr3 41184563 41185352 + 0.31450906201653 NA Intergenic Intergenic -101911 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_89_71_0.034388166411027_6.18711908464783_0.31450906201653 chr7 4657831 4658868 + 0.31450906201653 NA intron (NM_172894, intron 1 of 23) intron (NM_172894, intron 1 of 23) 601 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak2_86_74_-0.0730700668911597_6.1922836570503_0.31450906201653-3 chr7 120917804 120918454 + 0.31450906201653 NA intron (NM_001164096, intron 1 of 19) CpG 385 NM_001164096 26939 Mm.193632 NM_025298 ENSMUSG00000030880 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E protein-coding common_peak2_86_74_-0.0730700668911597_6.1922836570503_0.31450906201653 chr2 131909974 131910573 + 0.31450906201653 NA intron (NM_001278256, intron 1 of 3) intron (NM_001278256, intron 1 of 3) 345 NM_001278256 19122 Mm.648 NM_011170 ENSMUSG00000079037 Prnp AA960666|AI325101|CD230|PrP|PrP|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C prion protein protein-coding common_peak1_89_71_0.034388166411027_6.18711908464783_0.31450906201653-4 chr8 122282507 122283533 + 0.31450906201653 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 879 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_86_74_-0.0730700668911597_6.1922836570503_0.31450906201653-2 chr3 122046658 122047298 + 0.31450906201653 NA intron (NM_007378, intron 1 of 49) intron (NM_007378, intron 1 of 49) 2518 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_89_71_0.034388166411027_6.18711908464783_0.31450906201653-3 chr8 84711473 84712583 + 0.31450906201653 NA intron (NM_001081982, intron 9 of 9) intron (NM_001081982, intron 9 of 9) 10571 NM_008535 17095 Mm.4925 NM_008535 ENSMUSG00000034041 Lyl1 Lyl-1|bHLHa18 lymphoblastomic leukemia 1 protein-coding common_peak2_161_128_0.0351002181311157_7.02877736448881_0.314393429985711 chr17 45572080 45573242 + 0.314393429985711 NA intron (NM_008302, intron 1 of 10) CpG 600 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak1_87_75_-0.0758070904197696_6.2100239682337_0.314325647716191-6 chr8 45019556 45020374 + 0.314325647716191 NA intron (NM_001081286, intron 8 of 25) intron (NM_001081286, intron 8 of 25) 45453 NR_033588 434310 Mm.334512 NR_033588 ENSMUSG00000066158 AY512931 - cDNA sequence AY512931 ncRNA common_peak2_91_72_0.0459737633429933_6.21281144055151_0.314325647716191-2 chr1 184075652 184076685 + 0.314325647716191 NA TTS (NM_022019) TTS (NM_022019) 41787 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_87_75_-0.0758070904197696_6.2100239682337_0.314325647716191-4 chr2 84544723 84545801 + 0.314325647716191 NA Intergenic Intergenic -38389 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_87_75_-0.0758070904197696_6.2100239682337_0.314325647716191-5 chr6 92091126 92092197 + 0.314325647716191 NA promoter-TSS (NM_001347342) promoter-TSS (NM_001347342) 243 NM_011630 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding common_peak2_91_72_0.0459737633429933_6.21281144055151_0.314325647716191 chr1 132138370 132139590 + 0.314325647716191 NA intron (NM_008795, intron 1 of 15) intron (NM_008795, intron 1 of 15) 705 NM_008795 18557 Mm.28130 NM_008795 ENSMUSG00000026437 Cdk18 AA682070|Ctk18|Pctk3 cyclin-dependent kinase 18 protein-coding common_peak1_87_75_-0.0758070904197696_6.2100239682337_0.314325647716191-3 chr19 34878231 34879327 + 0.314325647716191 NA promoter-TSS (NM_023792) promoter-TSS (NM_023792) 676 NM_001114339 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding common_peak2_90_72_0.030317685575981_6.20498340166801_0.314325647716191 chr3 28721446 28722348 + 0.314325647716191 NA intron (NM_031197, intron 8 of 10) intron (NM_031197, intron 8 of 10) 23994 NM_031197 20526 Mm.18443 NM_031197 ENSMUSG00000027690 Slc2a2 AI266973|Glut-2|Glut2 solute carrier family 2 (facilitated glucose transporter), member 2 protein-coding common_peak1_90_72_0.030317685575981_6.20498340166801_0.314325647716191 chr18 65580286 65581456 + 0.314325647716191 NA intron (NM_207255, intron 1 of 5) CpG 641 NM_207255 328977 Mm.286232 NM_207255 ENSMUSG00000042439 Zfp532 C530030I18Rik|Znf532|mKIAA1629 zinc finger protein 532 protein-coding common_peak1_87_75_-0.0758070904197696_6.2100239682337_0.314325647716191-2 chr13 51100997 51102109 + 0.314325647716191 NA promoter-TSS (NR_029463) promoter-TSS (NR_029463) 6 NM_001283029 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding common_peak1_87_75_-0.0758070904197696_6.2100239682337_0.314325647716191 chr12 111376658 111377494 + 0.314325647716191 NA intron (NM_183016, intron 1 of 36) CpG 642 NM_183016 217866 Mm.27397 NM_183016 ENSMUSG00000021279 Cdc42bpb MRCKb CDC42 binding protein kinase beta protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-8 chr4 88760162 88760498 + 0.314192449397093 NA promoter-TSS (NM_001085531) promoter-TSS (NM_001085531) -444 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645 predicted gene 13283 protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-4 chr15 68362295 68362696 + 0.314192449397093 NA Intergenic Intergenic -21206 NR_029718 387228 NR_029718 ENSMUSG00000065437 Mir30d Mirn30d|mir-30d|mmu-mir-30d microRNA 30d ncRNA common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-7 chr18 82521716 82522377 + 0.314192449397093 NA intron (NM_001025245, intron 2 of 3) intron (NM_001025245, intron 2 of 3) -32417 NM_001025258 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-5 chr2 30252121 30252736 + 0.314192449397093 NA intron (NM_177725, intron 2 of 3) intron (NM_177725, intron 2 of 3) -13775 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-10 chr8 120217668 120218197 + 0.314192449397093 NA intron (NR_110496, intron 2 of 2) intron (NR_110496, intron 2 of 2) 10298 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093 chr11 74556248 74556693 + 0.314192449397093 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 33688 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-2 chr10 81378120 81378441 + 0.314192449397093 NA promoter-TSS (NM_019757) promoter-TSS (NM_019757) 90 NM_019757 56371 Mm.24202 NM_019757 ENSMUSG00000020235 Fzr1 AW108046|Cdh1|FZR|FZR2|Fyr|HCDH|HCDH1 fizzy and cell division cycle 20 related 1 protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-3 chr11 105589910 105590444 + 0.314192449397093 NA 5' UTR (NM_181071, exon 1 of 26) 5' UTR (NM_181071, exon 1 of 26) 191 NM_181071 77097 Mm.22501 NM_175492 ENSMUSG00000053580 Tanc2 3526402J09Rik|5730590C14Rik tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-9 chr4 137495519 137495894 + 0.314192449397093 NA intron (NM_008305, intron 1 of 96) MIRc|SINE|MIR 26903 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093 chr1 179545782 179546181 + 0.314192449397093 NA promoter-TSS (NM_146105) promoter-TSS (NM_146105) 295 NM_001331054 15278 Mm.293529 NM_008249 ENSMUSG00000026492 Tfb2m Hkp1 transcription factor B2, mitochondrial protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-4 chr16 16224920 16225519 + 0.314192449397093 NA intron (NM_026163, intron 1 of 12) intron (NM_026163, intron 1 of 12) 11874 NM_026163 67451 Mm.2252 NM_026163 ENSMUSG00000041957 Pkp2 1200008D14Rik|1200012P04Rik|AA516617|Pkp2l plakophilin 2 protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-3 chr15 41725474 41725781 + 0.314192449397093 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -63368 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-8 chr3 123507676 123508205 + 0.314192449397093 NA TTS (NR_028573) TTS (NR_028573) 126 NR_028573 100306957 Mm.260791 NR_028573 ENSMUSG00000092730 Snora24 ACA24 small nucleolar RNA, H/ACA box 24 snoRNA common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-10 chr6 82908370 82908991 + 0.314192449397093 NA Intergenic Intergenic -26827 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-9 chr4 149484796 149485155 + 0.314192449397093 NA promoter-TSS (NM_001356322) promoter-TSS (NM_001356322) 197 NM_001356357 66454 Mm.76062 NM_133435 ENSMUSG00000028992 Nmnat1 2610529L11Rik|5730441G13Rik|D4Cole1e|nmnat nicotinamide nucleotide adenylyltransferase 1 protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-2 chr13 49341634 49342040 + 0.314192449397093 NA exon (NM_029791, exon 1 of 8) exon (NM_029791, exon 1 of 8) 288 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - BICD cargo adaptor 2 protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-6 chr2 31761024 31761668 + 0.314192449397093 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 1173 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-7 chr4 43401916 43402635 + 0.314192449397093 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -4227 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-5 chr15 79141395 79141771 + 0.314192449397093 NA promoter-TSS (NM_001310579) promoter-TSS (NM_001310579) 258 NM_027231 69833 Mm.279861 NM_027231 ENSMUSG00000033020 Polr2f 1810060D16Rik|RPB6 polymerase (RNA) II (DNA directed) polypeptide F protein-coding common_peak1_38_34_-0.122909240262397_5.06782839681377_0.314192449397093-6 chr17 79745690 79746121 + 0.314192449397093 NA Intergenic Intergenic -30864 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-2 chr19 38591318 38591802 + 0.314192449397081 NA intron (NM_019588, intron 1 of 31) intron (NM_019588, intron 1 of 31) 67363 NM_019588 74055 Mm.34031 NM_019588 ENSMUSG00000024998 Plce1 4933403A21Rik|PLCepsilon|Plce|mKIAA1516 phospholipase C, epsilon 1 protein-coding common_peak1_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-4 chr2 59160942 59161339 + 0.314192449397081 NA promoter-TSS (NM_001001178) promoter-TSS (NM_001001178) 290 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-3 chr3 57410941 57411295 + 0.314192449397081 NA Intergenic Intergenic -14292 NM_145539 229302 Mm.26618 NM_145539 ENSMUSG00000027801 Tm4sf4 Iltmp transmembrane 4 superfamily member 4 protein-coding common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-7 chr9 66126816 66127350 + 0.314192449397081 NA intron (NM_001359210, intron 1 of 3) intron (NM_001359210, intron 1 of 3) 472 NM_026635 68250 Mm.27107 NM_026635 ENSMUSG00000032381 Fam96a 5730536A07Rik family with sequence similarity 96, member A protein-coding common_peak1_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-6 chr8 54547577 54548098 + 0.314192449397081 NA Intergenic Intergenic -2494 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-5 chr6 126848729 126849296 + 0.314192449397081 NA intron (NM_025358, intron 1 of 10) intron (NM_025358, intron 1 of 10) 132 NM_025358 66108 Mm.29939 NM_025358 ENSMUSG00000000399 Ndufa9 1010001N11Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 protein-coding common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081 chr1 182408352 182408918 + 0.314192449397081 NA promoter-TSS (NM_173378) promoter-TSS (NM_173378) -532 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-6 chr7 80323768 80324406 + 0.314192449397081 NA 5' UTR (NM_173445, exon 1 of 9) 5' UTR (NM_173445, exon 1 of 9) 367 NM_173445 269955 Mm.474502 NM_173445 ENSMUSG00000038930 Rccd1 5830436H09|E430018M08Rik RCC1 domain containing 1 protein-coding common_peak1_40_32_0.0336204278152286_5.06120433326607_0.314192449397081 chr1 37997510 37997951 + 0.314192449397081 NA promoter-TSS (NM_198303) promoter-TSS (NM_198303) -280 NM_198303 226982 Mm.260943 NM_198303 ENSMUSG00000026083 Eif5b A030003E17Rik|BC018347|IF2 eukaryotic translation initiation factor 5B protein-coding common_peak1_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-3 chr15 11906723 11907164 + 0.314192449397081 NA non-coding (NR_131059, exon 1 of 2) non-coding (NR_131059, exon 1 of 2) 418 NR_131059 381002 Mm.441967 NR_131059 ENSMUSG00000115240 Gm5144 - predicted gene 5144 ncRNA common_peak2_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-4 chr6 50380423 50380829 + 0.314192449397081 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 2211 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-2 chr11 115827299 115827700 + 0.314192449397081 NA intron (NM_001252532, intron 1 of 25) intron (NM_001252532, intron 1 of 25) 3441 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak1_40_32_0.0336204278152286_5.06120433326607_0.314192449397081-5 chr3 34080845 34081294 + 0.314192449397081 NA intron (NM_001026211, intron 1 of 5) intron (NM_001026211, intron 1 of 5) 285 NM_001026211 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding common_peak1_158_134_-0.0572649191267596_7.04818313748745_0.31419093809262 chr2 92007187 92009114 + 0.31419093809262 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 16020 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak2_256_204_0.0279248945335802_7.69344254677224_0.314174822888128 chr3 37640923 37643339 + 0.314174822888128 NA intron (NM_011896, intron 2 of 2) intron (NM_011896, intron 2 of 2) 2184 NM_011896 24063 Mm.330986 NM_011896 ENSMUSG00000037211 Spry1 sprouty1|spry-1 sprouty RTK signaling antagonist 1 protein-coding common_peak1_92_73_0.0418317761512865_6.23036925370459_0.31414715830176-2 chr12 21425411 21426779 + 0.31414715830176 NA Intergenic Intergenic -8659 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak2_92_73_0.0418317761512865_6.23036925370459_0.31414715830176-2 chr8 11263072 11263970 + 0.31414715830176 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -49284 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_88_76_-0.0784793142949738_6.22754688354741_0.31414715830176-2 chr9 20726300 20727766 + 0.31414715830176 NA promoter-TSS (NM_001357635) promoter-TSS (NM_001357635) -30 NM_001357635 244723 Mm.293552 NM_173777 ENSMUSG00000032172 Olfm2 A030009A06Rik olfactomedin 2 protein-coding common_peak1_92_73_0.0418317761512865_6.23036925370459_0.31414715830176-4 chr9 82975173 82976064 + 0.31414715830176 NA promoter-TSS (NM_001081216) promoter-TSS (NM_001081216) -129 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak2_92_73_0.0418317761512865_6.23036925370459_0.31414715830176 chr16 4880688 4881324 + 0.31414715830176 NA Intergenic Intergenic -1155 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak1_92_73_0.0418317761512865_6.23036925370459_0.31414715830176 chr11 30266907 30268099 + 0.31414715830176 NA Intergenic Intergenic -47731 NM_175836 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_88_76_-0.0784793142949738_6.22754688354741_0.31414715830176 chr14 101653583 101654529 + 0.31414715830176 NA promoter-TSS (NM_016723) promoter-TSS (NM_016723) 89 NM_016723 50933 Mm.275970 NM_016723 ENSMUSG00000022111 Uchl3 - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) protein-coding common_peak1_92_73_0.0418317761512865_6.23036925370459_0.31414715830176-3 chr9 55149400 55150379 + 0.31414715830176 NA promoter-TSS (NM_001346658) promoter-TSS (NM_001346658) -194 NM_001346658 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak2_164_131_0.0282188046466967_7.0585035216818_0.314091976150075 chr18 60736526 60737725 + 0.314091976150075 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) -3984 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_161_136_-0.0517046094061566_7.07217977825745_0.313994491417285 chr8 94837537 94838980 + 0.313994491417285 NA promoter-TSS (NM_026452) promoter-TSS (NM_026452) 82 NM_134141 109006 Mm.27582 NM_134141 ENSMUSG00000031781 Ciapin1 2810413N20Rik|AA617265|AU021794|anamorsin cytokine induced apoptosis inhibitor 1 protein-coding common_peak2_166_132_0.0345899365253546_7.07257740376387_0.313994491417285-2 chr8 12753273 12754628 + 0.313994491417285 NA Intergenic Intergenic -3066 NM_015804 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak2_166_132_0.0345899365253546_7.07257740376387_0.313994491417285 chr15 38454000 38455121 + 0.313994491417285 NA Intergenic Intergenic 35987 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_260_207_0.0290895281178409_7.71498448220001_0.313986582471589 chr4 155837669 155839508 + 0.313986582471589 NA Intergenic Intergenic -1092 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding common_peak1_89_77_-0.0810890510089095_6.24485769335779_0.313973398029927-2 chr8 64521822 64522555 + 0.313973398029927 NA Intergenic Intergenic -7747 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_93_74_0.0377876332329299_6.24771250711234_0.313973398029927 chr17 87851803 87852473 + 0.313973398029927 NA Intergenic Intergenic -54144 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak1_89_77_-0.0810890510089095_6.24485769335779_0.313973398029927 chr11 8588721 8589382 + 0.313973398029927 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 75484 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_93_74_0.0377876332329299_6.24771250711234_0.313973398029927-3 chr9 102626327 102627349 + 0.313973398029927 NA promoter-TSS (NM_001301689) promoter-TSS (NM_001301689) 542 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_93_74_0.0377876332329299_6.24771250711234_0.313973398029927-2 chr8 70130998 70132009 + 0.313973398029927 NA non-coding (NR_104434, exon 1 of 4) non-coding (NR_104434, exon 1 of 4) 176 NM_001025587 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding common_peak2_89_77_-0.0810890510089095_6.24485769335779_0.313973398029927 chr15 75922797 75923353 + 0.313973398029927 NA Intergenic Intergenic -1515 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak1_261_208_0.0276481967882631_7.72118323047501_0.31392502808928 chr4 155837643 155839509 + 0.31392502808928 NA Intergenic Intergenic -1104 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding common_peak1_162_137_-0.0533814670537449_7.0818337232513_0.313898451062406 chr11 77606867 77608511 + 0.313898451062406 NA 5' UTR (NM_144825, exon 1 of 20) 5' UTR (NM_144825, exon 1 of 20) 126 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-4 chr2 125673345 125673881 + 0.313805205020552 NA exon (NM_025613, exon 1 of 1) exon (NM_025613, exon 1 of 1) 513 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-6 chr18 36782579 36783006 + 0.313805205020552 NA promoter-TSS (NM_001305627) promoter-TSS (NM_001305627) 413 NM_008214 15115 Mm.10528 NM_008214 ENSMUSG00000001380 Hars MMHRS histidyl-tRNA synthetase protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-10 chr5 34513303 34513837 + 0.313805205020552 NA intron (NM_139064, intron 1 of 5) CpG 409 NM_139064 231130 Mm.28615 NM_139064 ENSMUSG00000059866 Tnip2 1810020H16Rik|ABIN-2|AI428870 TNFAIP3 interacting protein 2 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-13 chr8 78715194 78715783 + 0.313805205020552 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 105664 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-2 chr11 103412187 103412660 + 0.313805205020552 NA intron (NM_183034, intron 1 of 11) CpG 241 NM_183034 353047 Mm.18556 NM_183034 ENSMUSG00000034247 Plekhm1 AP162|B2|BC038943|D330036J23Rik pleckstrin homology domain containing, family M (with RUN domain) member 1 protein-coding common_peak1_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-5 chr8 125922724 125923343 + 0.313805205020552 NA intron (NM_145608, intron 1 of 9) intron (NM_145608, intron 1 of 9) 12583 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-7 chr18 75504357 75504842 + 0.313805205020552 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -10046 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552 chr1 93167149 93167727 + 0.313805205020552 NA promoter-TSS (NM_001310428) promoter-TSS (NM_001310428) -985 NM_001310428 381284 Mm.193346 NM_001310428 ENSMUSG00000084989 Crocc2 E030010N08Rik|Gm976 ciliary rootlet coiled-coil, rootletin family member 2 protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-8 chr7 136894657 136895258 + 0.313805205020552 NA intron (NM_008598, intron 1 of 4) intron (NM_008598, intron 1 of 4) 346 NM_008598 17314 Mm.440219 NM_008598 ENSMUSG00000054612 Mgmt AGT|AI267024|Agat O-6-methylguanine-DNA methyltransferase protein-coding common_peak2_42_33_0.0587796889590928_5.11685268572989_0.313805205020552 chr15 97812881 97813325 + 0.313805205020552 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) 1760 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-4 chr4 141273132 141273809 + 0.313805205020552 NA Intergenic Intergenic -4969 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak2_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-5 chr9 32708310 32709170 + 0.313805205020552 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 12698 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_42_33_0.0587796889590928_5.11685268572989_0.313805205020552 chr1 64118249 64118819 + 0.313805205020552 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 2855 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak2_42_33_0.0587796889590928_5.11685268572989_0.313805205020552 chr12 17390819 17391464 + 0.313805205020552 NA intron (NM_001008421, intron 13 of 20) PB1|SINE|Alu 35749 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak1_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-2 chr17 32321418 32321962 + 0.313805205020552 NA promoter-TSS (NR_131218) promoter-TSS (NR_131218) -452 NR_131218 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552 chr10 77146561 77147127 + 0.313805205020552 NA intron (NM_009929, intron 2 of 41) intron (NM_009929, intron 2 of 41) 19686 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-9 chr4 135254404 135254757 + 0.313805205020552 NA intron (NM_013885, intron 1 of 5) intron (NM_013885, intron 1 of 5) 18180 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-7 chr7 128739884 128740373 + 0.313805205020552 NA intron (NM_145955, intron 1 of 15) CpG 301 NM_145955 210711 Mm.58882 NM_145955 ENSMUSG00000048170 Mcmbp 1110007A13Rik|AU017382|BC025641|MCM-BP minichromosome maintenance complex binding protein protein-coding common_peak2_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-3 chr18 31634334 31634803 + 0.313805205020552 NA promoter-TSS (NM_001357555) promoter-TSS (NM_001357555) 200 NM_172965 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-4 chr17 25755138 25755889 + 0.313805205020552 NA Intergenic Intergenic -1135 NM_001356286 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding common_peak1_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-3 chr4 59003230 59003757 + 0.313805205020552 NA exon (NM_001033165, exon 1 of 4) exon (NM_001033165, exon 1 of 4) 300 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding common_peak2_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-2 chr16 94568788 94569224 + 0.313805205020552 NA Intergenic CpG -1200 NM_007890 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-5 chr4 155223485 155223777 + 0.313805205020552 NA Intergenic Intergenic -1096 NM_001357191 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_42_33_0.0587796889590928_5.11685268572989_0.313805205020552 chr15 79346427 79346889 + 0.313805205020552 NA promoter-TSS (NM_001304830) promoter-TSS (NM_001304830) 37 NM_001304830 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-5 chr17 73633275 73633760 + 0.313805205020552 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 76934 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-2 chr10 122096560 122097033 + 0.313805205020552 NA intron (NM_153059, intron 1 of 5) CpG 306 NM_153059 216395 Mm.236764 NM_153059 ENSMUSG00000034620 Tmem5 6330415D21Rik transmembrane protein 5 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-12 chr6 38642296 38642779 + 0.313805205020552 NA Intergenic Intergenic -5298 NM_001033171 74253 Mm.121859 NM_001033171 ENSMUSG00000071537 Klrg2 2310020F24Rik killer cell lectin-like receptor subfamily G, member 2 protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-3 chr19 29647754 29648375 + 0.313805205020552 NA exon (NM_001081213, exon 1 of 15) exon (NM_001081213, exon 1 of 15) 351 NM_001081213 226090 Mm.267131 NM_001081213 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|b2b2633Clo|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-11 chr5 149635622 149636123 + 0.313805205020552 NA intron (NM_001347534, intron 1 of 16) CpG 443 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-8 chr2 117950819 117951390 + 0.313805205020552 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 129176 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-6 chr5 86172279 86172710 + 0.313805205020552 NA intron (NM_172712, intron 1 of 32) CpG 249 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak1_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-3 chr11 87086289 87086717 + 0.313805205020552 NA exon (NM_024262, exon 1 of 4) exon (NM_024262, exon 1 of 4) 274 NM_024262 74133 Mm.23257 NM_024262 ENSMUSG00000020495 Smg8 1200011M11Rik smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_41_33_0.0250718547690409_5.09999876863486_0.313805205020552-9 chr9 63664516 63665071 + 0.313805205020552 NA intron (NM_016769, intron 4 of 8) intron (NM_016769, intron 4 of 8) 62147 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_42_33_0.0587796889590928_5.11685268572989_0.313805205020552-4 chr6 115271272 115271886 + 0.313805205020552 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -19374 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546 chr1 138856021 138856766 + 0.313805205020546 NA intron (NM_001081226, intron 1 of 2) CpG 461 NM_001081226 69549 Mm.264673 NM_001081226 ENSMUSG00000079283 2310009B15Rik - RIKEN cDNA 2310009B15 gene protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-2 chr11 101063547 101064029 + 0.313805205020546 NA TTS (NM_001243051) TTS (NM_001243051) -6306 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-5 chr19 46041658 46042176 + 0.313805205020546 NA intron (NM_001113408, intron 1 of 10) intron (NM_001113408, intron 1 of 10) -2296 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-9 chr7 141372663 141373523 + 0.313805205020546 NA Intergenic Intergenic -7983 NR_033532 320871 Mm.475463 NM_177280 ENSMUSG00000086844 B230206H07Rik - RIKEN cDNA B230206H07 gene ncRNA common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-4 chr18 60652856 60653338 + 0.313805205020546 NA Intergenic Intergenic -10313 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546 chr11 104627695 104628433 + 0.313805205020546 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 20064 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-10 chr8 126881507 126881879 + 0.313805205020546 NA Intergenic Intergenic 32673 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-7 chr9 71323168 71323541 + 0.313805205020546 NA Intergenic Intergenic 107565 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-6 chr6 116337862 116338471 + 0.313805205020546 NA 5' UTR (NM_001302383, exon 1 of 8) 5' UTR (NM_001302383, exon 1 of 8) 144 NM_001302383 71779 Mm.27064 NM_027920 ENSMUSG00000025702 March8 1300017E09Rik|MARCH-VIII|Mir membrane-associated ring finger (C3HC4) 8 protein-coding common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-3 chr17 36060124 36060542 + 0.313805205020546 NA Intergenic Intergenic -1962 NM_001199967 100529082 Mm.484641 NM_001199967 ENSMUSG00000079492 Gm11127 - predicted gene 11127 protein-coding common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-6 chr9 44725198 44725698 + 0.313805205020546 NA intron (NM_153537, intron 4 of 21) intron (NM_153537, intron 4 of 21) 9750 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-4 chr7 99131471 99131828 + 0.313805205020546 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 9495 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-8 chr7 67645544 67645962 + 0.313805205020546 NA promoter-TSS (NM_175124) promoter-TSS (NM_175124) -517 NR_028143 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-5 chr8 60860072 60860477 + 0.313805205020546 NA Intergenic Intergenic -30119 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-3 chr17 14960694 14961207 + 0.313805205020546 NA intron (NM_024250, intron 1 of 11) CpG 310 NM_001360983 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding common_peak1_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-7 chr6 142367900 142368463 + 0.313805205020546 NA intron (NM_001355511, intron 8 of 14) intron (NM_001355511, intron 8 of 14) 18761 NM_001355511 19691 Mm.27407 NM_023042 ENSMUSG00000030243 Recql RecQ1 RecQ protein-like protein-coding common_peak2_39_35_-0.127283038043882_5.10628348242037_0.313805205020546-2 chr12 84969408 84969964 + 0.313805205020546 NA intron (NM_178065, intron 1 of 19) intron (NM_178065, intron 1 of 19) 1200 NM_178065 68497 Mm.24446 NM_178065 ENSMUSG00000042350 Arel1 1110018G07Rik|AI649076|AW610792|Kiaa0317|mKIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding common_peak2_94_75_0.0338378602821958_6.26484644358468_0.313804181395463-2 chr2 90846778 90847926 + 0.313804181395463 NA exon (NM_001317241, exon 1 of 13) exon (NM_001317241, exon 1 of 13) 197 NM_001317242 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak2_90_78_-0.0836385037211045_6.26196149631655_0.313804181395463-2 chr6 140624081 140625059 + 0.313804181395463 NA promoter-TSS (NM_001309437) promoter-TSS (NM_001309437) -339 NM_001309437 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_91_78_-0.0679824259540922_6.26978953520006_0.313804181395463 chr2 125858382 125858998 + 0.313804181395463 NA promoter-TSS (NM_175154) promoter-TSS (NM_175154) 392 NM_009939 12848 Mm.3596 NM_009939 ENSMUSG00000027206 Cops2 AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15 COP9 signalosome subunit 2 protein-coding common_peak2_94_75_0.0338378602821958_6.26484644358468_0.313804181395463 chr1 71556602 71557698 + 0.313804181395463 NA promoter-TSS (NM_026195) promoter-TSS (NM_026195) -6 NM_026195 108147 Mm.38010 NM_026195 ENSMUSG00000026192 Atic 2610509C24Rik|AA536954|AW212393 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding common_peak2_90_78_-0.0836385037211045_6.26196149631655_0.313804181395463 chr11 116023397 116024044 + 0.313804181395463 NA exon (NM_008211, exon 3 of 4) exon (NM_008211, exon 3 of 4) 784 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak1_90_78_-0.0836385037211045_6.26196149631655_0.313804181395463 chr10 59323373 59324523 + 0.313804181395463 NA intron (NM_001316370, intron 1 of 13) intron (NM_001316370, intron 1 of 13) 652 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak1_163_138_-0.0550364846963136_7.09142283037535_0.313803823219642 chr10 84440631 84441784 + 0.313803823219642 NA promoter-TSS (NM_001004363) promoter-TSS (NM_001004363) -736 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_264_210_0.0302178061700662_7.73620809179222_0.313803657451646 chr17 46855999 46857550 + 0.313803657451646 NA Intergenic CpG -25361 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Bicral Gltscr1l|mKIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding common_peak2_164_139_-0.0566700929398163_7.10094797047506_0.313710576953589 chr15 76904100 76905193 + 0.313710576953589 NA exon (NM_012053, exon 3 of 6) exon (NM_012053, exon 3 of 6) 575 NM_012053 26961 Mm.30066 NM_012053 ENSMUSG00000003970 Rpl8 - ribosomal protein L8 protein-coding common_peak1_169_135_0.027914955693503_7.10142031909709_0.313710576953589 chr17 45571924 45573271 + 0.313710576953589 NA intron (NM_008302, intron 1 of 10) CpG 664 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak1_170_135_0.0363168381764742_7.10562126033858_0.313710576953589 chr11 16752260 16753240 + 0.313710576953589 NA intron (NM_207655, intron 1 of 27) CpG 547 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_1057_862_-0.0187151285239739_9.74385918491697_0.313699101433185 chrUn_JH584304 58926 60197 + 0.313699101433185 NA intron (NR_003518, intron 1 of 6) intron (NR_003518, intron 1 of 6) 128 NR_003518 66776 Mm.247625 NR_003518 Pisd-ps3 4933439C20Rik phosphatidylserine decarboxylase, pseudogene 3 pseudo common_peak2_92_79_-0.070642953107126_6.2866066183338_0.313639332470866 chr2 127587159 127587716 + 0.313639332470866 NA promoter-TSS (NM_029963) promoter-TSS (NM_029963) 11 NM_029963 77721 Mm.274601 NM_029963 ENSMUSG00000027374 Mrps5 1620401I16Rik|AI850294 mitochondrial ribosomal protein S5 protein-coding common_peak2_95_76_0.0299791466038615_6.28177611399683_0.313639332470866 chr12 86241914 86242841 + 0.313639332470866 NA intron (NM_027405, intron 1 of 9) intron (NM_027405, intron 1 of 9) 519 NM_001324488 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding common_peak2_95_76_0.0299791466038615_6.28177611399683_0.313639332470866-2 chr13 103773683 103774567 + 0.313639332470866 NA intron (NM_001361085, intron 1 of 11) CpG 483 NM_001361085 218543 Mm.458176 NM_172592 ENSMUSG00000032621 Srek1 8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12 splicing regulatory glutamine/lysine-rich protein 1 protein-coding common_peak1_96_76_0.0448240137161768_6.28919854755299_0.313639332470866-3 chr8 86624179 86625046 + 0.313639332470866 NA intron (NM_025827, intron 1 of 14) intron (NM_025827, intron 1 of 14) 569 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak1_95_76_0.0299791466038615_6.28177611399683_0.313639332470866 chr10 17725700 17726865 + 0.313639332470866 NA TTS (NM_010828) TTS (NM_010828) 3054 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_96_76_0.0448240137161768_6.28919854755299_0.313639332470866-2 chr5 123748719 123749348 + 0.313639332470866 NA promoter-TSS (NM_001042421) promoter-TSS (NM_001042421) 381 NM_001005525 208606 Mm.276341 NM_025438 ENSMUSG00000029422 Rsrc2 1500011J06Rik arginine/serine-rich coiled-coil 2 protein-coding common_peak1_95_76_0.0299791466038615_6.28177611399683_0.313639332470866-2 chr15 39111896 39112654 + 0.313639332470866 NA promoter-TSS (NM_198606) promoter-TSS (NM_198606) 441 NM_172402 69906 Mm.17875 NM_172402 ENSMUSG00000022299 Slc25a32 2610043O12Rik|Mftc solute carrier family 25, member 32 protein-coding common_peak2_96_76_0.0448240137161768_6.28919854755299_0.313639332470866 chr16 57419905 57420802 + 0.313639332470866 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 67076 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_96_76_0.0448240137161768_6.28919854755299_0.313639332470866-2 chr12 69680922 69682043 + 0.313639332470866 NA intron (NM_001135559, intron 1 of 22) CpG 370 NM_001135559 20663 Mm.3770 NM_001135559 ENSMUSG00000034801 Sos2 SOS-2|mSOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding common_peak2_92_79_-0.070642953107126_6.2866066183338_0.313639332470866-2 chr7 126797900 126799097 + 0.313639332470866 NA intron (NM_001177307, intron 1 of 9) intron (NM_001177307, intron 1 of 9) 680 NM_001177307 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding common_peak1_96_76_0.0448240137161768_6.28919854755299_0.313639332470866 chr10 99242412 99243395 + 0.313639332470866 NA Intergenic Intergenic -20328 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_167_141_-0.0513223826317901_7.12408592818879_0.313528109861858 chr17 47008898 47010588 + 0.313528109861858 NA intron (NM_146078, intron 1 of 46) intron (NM_146078, intron 1 of 46) 789 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak1_172_137_0.0319125830886859_7.12448074832251_0.313528109861858 chr7 25687026 25689222 + 0.313528109861858 NA exon (NM_011577, exon 1 of 7) exon (NM_011577, exon 1 of 7) 1122 NM_011577 21803 Mm.248380 NM_011577 ENSMUSG00000002603 Tgfb1 TGF-beta1|TGFbeta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 protein-coding common_peak2_93_80_-0.073243679155814_6.30322816330672_0.313478684295929 chr18 14988929 14990204 + 0.313478684295929 NA non-coding (NR_045372, exon 3 of 5) non-coding (NR_045372, exon 3 of 5) 571 NR_045372 74456 Mm.391075 NR_045372 4933424G05Rik - RIKEN cDNA 4933424G05 gene ncRNA common_peak2_93_80_-0.073243679155814_6.30322816330672_0.313478684295929-2 chr5 139734993 139736287 + 0.313478684295929 NA intron (NM_174850, intron 1 of 16) intron (NM_174850, intron 1 of 16) 693 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak1_93_80_-0.073243679155814_6.30322816330672_0.313478684295929-2 chr3 27584216 27585186 + 0.313478684295929 NA TTS (NR_037275) TTS (NR_037275) 294 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak2_97_77_0.040900944930562_6.30585269132753_0.313478684295929 chr12 113140465 113141512 + 0.313478684295929 NA intron (NM_001347443, intron 1 of 6) CpG 383 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding common_peak1_93_80_-0.073243679155814_6.30322816330672_0.313478684295929 chr15 81959998 81960836 + 0.313478684295929 NA intron (NM_001282041, intron 1 of 5) CpG 513 NM_001282040 29858 Mm.18939 NM_013872 ENSMUSG00000022474 Pmm1 C77612 phosphomannomutase 1 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-7 chr7 27178190 27178817 + 0.31344009820369 NA intron (NM_029391, intron 1 of 7) intron (NM_029391, intron 1 of 7) 380 NM_029391 19342 Mm.482114 NM_029391 ENSMUSG00000053291 Rab4b 1500031G17Rik RAB4B, member RAS oncogene family protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-5 chr3 145759179 145759679 + 0.31344009820369 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 737 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-4 chr3 38276660 38277021 + 0.31344009820369 NA Intergenic Intergenic -68721 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_43_34_0.0498923856520941_5.15422920977101_0.31344009820369 chr10 99265312 99265790 + 0.31344009820369 NA intron (NM_026268, intron 2 of 2) intron (NM_026268, intron 2 of 2) 2320 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-2 chr13 65278189 65278719 + 0.31344009820369 NA promoter-TSS (NM_178364) promoter-TSS (NM_178364) -400 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-8 chr8 119710761 119711336 + 0.31344009820369 NA intron (NM_026922, intron 1 of 26) intron (NM_026922, intron 1 of 26) 11039 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-6 chr4 43443312 43443872 + 0.31344009820369 NA exon (NM_011571, exon 1 of 10) exon (NM_011571, exon 1 of 10) 1315 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-3 chr16 32419862 32420406 + 0.31344009820369 NA intron (NR_154990, intron 1 of 3) intron (NR_154990, intron 1 of 3) 432 NM_001347183 66061 Mm.302693 NM_025329 ENSMUSG00000014075 Tctex1d2 0610012D17Rik|2410011K15Rik Tctex1 domain containing 2 protein-coding common_peak2_43_34_0.0498923856520941_5.15422920977101_0.31344009820369-2 chr3 50001140 50001688 + 0.31344009820369 NA Intergenic Intergenic -244098 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak1_43_34_0.0498923856520941_5.15422920977101_0.31344009820369 chr11 118024461 118025216 + 0.31344009820369 NA TTS (NM_133757) TTS (NM_133757) 22568 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-10 chr9 111586753 111587508 + 0.313440098203684 NA intron (NM_016853, intron 8 of 10) intron (NM_016853, intron 8 of 10) 103218 NM_016853 20840 Mm.1414 NM_016853 ENSMUSG00000032502 Stac - src homology three (SH3) and cysteine rich domain protein-coding common_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-5 chr7 13040418 13041155 + 0.313440098203684 NA Intergenic Intergenic -2511 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684 chr1 171150227 171150534 + 0.313440098203684 NA promoter-TSS (NM_008623) promoter-TSS (NM_008623) 223 NM_025321 66052 Mm.198138 NM_025321 ENSMUSG00000058076 Sdhc 0610010E03Rik|AI316496|AU019277 succinate dehydrogenase complex, subunit C, integral membrane protein protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-6 chr18 75465119 75465433 + 0.313440098203684 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -49369 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684 chr1 72600076 72600936 + 0.313440098203684 NA intron (NM_018817, intron 8 of 16) intron (NM_018817, intron 8 of 16) 17255 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding common_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-3 chr3 79559284 79559953 + 0.313440098203684 NA intron (NM_001162999, intron 1 of 16) intron (NM_001162999, intron 1 of 16) 8061 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-3 chr15 77056060 77056937 + 0.313440098203684 NA 3' UTR (NM_028010, exon 5 of 5) 3' UTR (NM_028010, exon 5 of 5) -5830 NM_013593 17189 Mm.404074 NM_013593 ENSMUSG00000018893 Mb AI325109 myoglobin protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-2 chr13 114679915 114680427 + 0.313440098203684 NA intron (NR_045976, intron 3 of 6) intron (NR_045976, intron 3 of 6) 72943 NR_045976 75161 Mm.50406 NM_175218 ENSMUSG00000051758 4930544M13Rik - RIKEN cDNA 4930544M13 gene ncRNA unique_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684 chr4 141570993 141571525 + 0.313440098203684 NA Intergenic Intergenic 25097 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-4 chr17 56183320 56183887 + 0.313440098203684 NA intron (NM_080837, intron 1 of 5) intron (NM_080837, intron 1 of 5) 317 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-8 chr4 107367803 107368184 + 0.313440098203684 NA 5' UTR (NM_028355, exon 1 of 18) 5' UTR (NM_028355, exon 1 of 18) 209 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-2 chr17 24695461 24695996 + 0.313440098203684 NA promoter-TSS (NM_001357836) promoter-TSS (NM_001357836) 428 NM_023040 11692 Mm.28124 NM_023040 ENSMUSG00000040888 Gfer Alr|ERV1 growth factor, augmenter of liver regeneration protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-7 chr4 88757080 88757585 + 0.313440098203684 NA promoter-TSS (NM_001243150) promoter-TSS (NM_001243150) -512 NM_001243150 100041062 Mm.489587 NM_001243150 Gm13286 - predicted gene 13286 protein-coding common_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-6 chr8 22757018 22757511 + 0.313440098203684 NA promoter-TSS (NM_008872) promoter-TSS (NM_008872) -458 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding unique_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684 chr8 128679881 128680605 + 0.313440098203684 NA Intergenic Intergenic -5411 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-5 chr17 78445226 78445746 + 0.313440098203684 NA Intergenic Intergenic -27334 NM_001285940 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-9 chr8 71371349 71371702 + 0.313440098203684 NA non-coding (NR_122030, exon 1 of 3) non-coding (NR_122030, exon 1 of 3) 227 NM_001293800 77090 Mm.440170 NM_029865 ENSMUSG00000002396 Ocel1 9430098E02Rik|AI326022|AI593544 occludin/ELL domain containing 1 protein-coding common_peak2_40_36_-0.131438818455268_5.14373395640132_0.313440098203684-4 chr6 113483546 113484023 + 0.313440098203684 NA TTS (NM_134159) TTS (NM_134159) 428 NR_145485 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak2_173_138_0.02975257130797_7.13381735837749_0.313438831522011 chr3 95675062 95676817 + 0.313438831522011 NA TTS (NM_144899) TTS (NM_144899) 11978 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak2_170_143_-0.0461453220154988_7.14685234043456_0.313350819669882 chr11 95075789 95077798 + 0.313350819669882 NA promoter-TSS (NM_001306162) promoter-TSS (NM_001306162) 18 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_94_81_-0.0757866308923028_6.31965868917193_0.313322078313311-2 chr8 69625179 69625602 + 0.313322078313311 NA promoter-TSS (NM_001045553) promoter-TSS (NM_001045553) 158 NM_172754 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak2_94_81_-0.0757866308923028_6.31965868917193_0.313322078313311 chr2 173659835 173660567 + 0.313322078313311 NA promoter-TSS (NR_027957) promoter-TSS (NR_027957) 356 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_176_140_0.0336303555780955_7.15636653018784_0.313264047545147 chr2 160645981 160647185 + 0.313264047545147 NA intron (NM_009408, intron 1 of 20) CpG 686 NM_009408 21969 Mm.217233 NM_009408 ENSMUSG00000070544 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I protein-coding common_peak2_176_140_0.0336303555780955_7.15636653018784_0.313264047545147 chr14 25495723 25498264 + 0.313264047545147 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) -37446 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_710_566_0.0179239866414704_9.15616691826296_0.313220818022103 chr19 59458781 59464286 + 0.313220818022103 NA intron (NM_010132, intron 1 of 2) intron (NM_010132, intron 1 of 2) 2843 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak2_96_82_-0.0634288769358466_6.343324992879_0.313169363846758 chr2 31953961 31954711 + 0.313169363846758 NA intron (NM_145144, intron 2 of 5) MIRb|SINE|MIR 4033 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding common_peak1_99_79_0.0333157876917012_6.33858598873321_0.313169363846758 chr11 31564490 31565349 + 0.313169363846758 NA Intergenic Intergenic 106943 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_99_79_0.0333157876917012_6.33858598873321_0.313169363846758-3 chr3 54734797 54735916 + 0.313169363846758 NA promoter-TSS (NM_025442) promoter-TSS (NM_025442) 8 NM_027148 69639 Mm.29253 NM_027148 ENSMUSG00000027752 Exosc8 2310032N20Rik|CIP3|mKIAA4013 exosome component 8 protein-coding common_peak2_96_82_-0.0634288769358466_6.343324992879_0.313169363846758-2 chr6 88925398 88926178 + 0.313169363846758 NA Intergenic Intergenic 23537 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_99_79_0.0333157876917012_6.33858598873321_0.313169363846758 chr1 36709066 36709973 + 0.313169363846758 NA intron (NM_146107, intron 1 of 10) intron (NM_146107, intron 1 of 10) 406 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding common_peak1_99_79_0.0333157876917012_6.33858598873321_0.313169363846758-2 chr11 113649329 113650492 + 0.313169363846758 NA intron (NM_013581, intron 1 of 13) CpG 381 NM_013581 16834 Mm.261620 NM_013581 ENSMUSG00000018661 Cog1 6030445I15|Ldlb|mKIAA1381 component of oligomeric golgi complex 1 protein-coding common_peak2_95_82_-0.078273744048162_6.33590255932284_0.313169363846758 chr6 97210741 97212014 + 0.313169363846758 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 585 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak2_393_325_-0.0292447717296458_8.33410576836625_0.313168836923826 chr2 165855790 165859453 + 0.313168836923826 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 552 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-5 chr5 93094359 93094692 + 0.313095283157754 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 1109 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-4 chr17 35771931 35772471 + 0.313095283157754 NA promoter-TSS (NR_045459) promoter-TSS (NR_045459) -249 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak2_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-3 chr16 8863873 8864395 + 0.313095283157754 NA Intergenic Intergenic 34034 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-2 chr11 96310232 96310844 + 0.313095283157754 NA Intergenic Intergenic -3628 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA common_peak2_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-2 chr13 28756654 28757271 + 0.313095283157754 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -46089 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak2_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-3 chr16 45367039 45367538 + 0.313095283157754 NA Intergenic Intergenic 41765 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-3 chr3 90202938 90203669 + 0.313095283157754 NA intron (NM_029937, intron 35 of 39) intron (NM_029937, intron 35 of 39) 10344 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak2_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-4 chr2 26916603 26917241 + 0.313095283157754 NA promoter-TSS (NM_013677) promoter-TSS (NM_013677) -392 NM_013677 20930 Mm.347512 NM_013677 ENSMUSG00000015790 Surf1 0610010F23Rik|Surf-1 surfeit gene 1 protein-coding common_peak1_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-2 chr13 60049994 60050473 + 0.313095283157754 NA intron (NR_046142, intron 1 of 2) MIR3|SINE|MIR 20522 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak2_42_37_-0.101684983234153_5.19708502182651_0.313095283157754 chr10 93311185 93311579 + 0.313095283157754 NA promoter-TSS (NM_013508) promoter-TSS (NM_013508) -223 NM_001322265 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_42_37_-0.101684983234153_5.19708502182651_0.313095283157754 chr13 14629886 14630660 + 0.313095283157754 NA promoter-TSS (NM_001104646) promoter-TSS (NM_001104646) 15 NM_134067 105351 Mm.41450 NM_134067 ENSMUSG00000039182 AW209491 - expressed sequence AW209491 protein-coding common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-2 chr16 23239561 23240225 + 0.313095283157754 NA intron (NM_001252505, intron 1 of 7) intron (NM_001252505, intron 1 of 7) 13872 NM_001252505 20440 Mm.149029 NM_145933 ENSMUSG00000022885 St6gal1 AW742324|Siat1|St6Gal-I|St6gal|St6galI beta galactoside alpha 2,6 sialyltransferase 1 protein-coding common_peak1_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-4 chr7 5014410 5014642 + 0.313095283157754 NA promoter-TSS (NM_025324) promoter-TSS (NM_025324) 202 NM_001360241 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754 chr10 93272254 93272958 + 0.313095283157754 NA intron (NM_001322265, intron 2 of 4) MLT1C|LTR|ERVL-MaLR 38553 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-8 chr9 96775157 96775857 + 0.313095283157754 NA Intergenic B4A|SINE|B4 9945 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-4 chr3 145799137 145799687 + 0.313095283157754 NA intron (NM_026993, intron 1 of 5) intron (NM_026993, intron 1 of 5) 40720 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak1_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-3 chr18 52465684 52466082 + 0.313095283157754 NA intron (NM_026040, intron 1 of 7) CpG 190 NM_026040 67222 Mm.100617 NM_026040 ENSMUSG00000024528 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 protein-coding common_peak2_41_37_-0.135392817424205_5.18023110473148_0.313095283157754 chr11 70237953 70238471 + 0.313095283157754 NA promoter-TSS (NM_001177603) promoter-TSS (NM_001177603) -298 NM_145758 104457 Mm.30016 NM_026757 ENSMUSG00000020831 0610010K14Rik 1110020A23Rik|AL033328|AU045833|Bap18 RIKEN cDNA 0610010K14 gene protein-coding common_peak2_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-6 chr2 72308698 72309329 + 0.313095283157754 NA intron (NM_023057, intron 2 of 19) intron (NM_023057, intron 2 of 19) 23312 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-5 chr7 116092695 116093122 + 0.313095283157754 NA promoter-TSS (NM_019772) promoter-TSS (NM_019772) 241 NR_029433 69350 Mm.440425 NR_029433 ENSMUSG00000087621 1700003G18Rik 2610312K03Rik RIKEN cDNA 1700003G18 gene ncRNA common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-6 chr5 151109219 151109825 + 0.313095283157754 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 80671 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-5 chr19 56990801 56991228 + 0.313095283157754 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 17561 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_42_37_-0.101684983234153_5.19708502182651_0.313095283157754-5 chr5 117359964 117360654 + 0.313095283157754 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 3004 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_41_37_-0.135392817424205_5.18023110473148_0.313095283157754-7 chr8 109144228 109144731 + 0.313095283157754 NA TTS (NR_151498) TTS (NR_151498) 69257 NR_126329 628686 Mm.203332 NR_126329 ENSMUSG00000097393 D030068K23Rik - RIKEN cDNA D030068K23 gene ncRNA common_peak2_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-3 chr16 30066443 30066808 + 0.313095283157747 NA intron (NM_008235, intron 3 of 3) CpG 1268 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hes family bHLH transcription factor 1 protein-coding common_peak1_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-2 chr2 13557418 13558010 + 0.313095283157747 NA Intergenic Intergenic -13050 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak2_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-5 chr7 84361549 84362097 + 0.313095283157747 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 48215 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-4 chr7 80403712 80404698 + 0.313095283157747 NA intron (NM_001081454, intron 1 of 15) intron (NM_001081454, intron 1 of 15) 1231 NM_001081454 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding unique_peak1_44_35_0.0414431459842719_5.19064657443445_0.313095283157747 chr5 32142024 32142989 + 0.313095283157747 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 6034 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-2 chr10 121365274 121365841 + 0.313095283157747 NA intron (NM_029364, intron 1 of 13) CpG 467 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-3 chr2 143903165 143903737 + 0.313095283157747 NA Intergenic Intergenic -11880 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak1_44_35_0.0414431459842719_5.19064657443445_0.313095283157747 chr11 4308394 4308685 + 0.313095283157747 NA Intergenic Intergenic 41743 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_44_35_0.0414431459842719_5.19064657443445_0.313095283157747-4 chr19 45048390 45048639 + 0.313095283157747 NA intron (NM_001362381, intron 1 of 10) intron (NM_001362381, intron 1 of 10) 938 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_44_35_0.0414431459842719_5.19064657443445_0.313095283157747 chr1 34851892 34852481 + 0.313095283157747 NA intron (NM_145516, intron 1 of 7) intron (NM_145516, intron 1 of 7) 2197 NM_001357425 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding common_peak1_178_142_0.0294062355581186_7.17457445455745_0.313094119153942 chr8 70042137 70043393 + 0.313094119153942 NA promoter-TSS (NM_001167939) promoter-TSS (NM_001167939) -31 NM_028993 74549 Mm.269061 NM_028993 ENSMUSG00000031858 Mau2 9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892 MAU2 sister chromatid cohesion factor protein-coding common_peak1_97_83_-0.06601425898595_6.35931029328579_0.313020397617402-2 chr7 45718164 45719177 + 0.313020397617402 NA promoter-TSS (NM_203280) promoter-TSS (NM_203280) 599 NM_009077 19899 Mm.3459 NM_009077 ENSMUSG00000059070 Rpl18 L18|Rpl18a ribosomal protein L18 protein-coding common_peak1_100_80_0.0296478963727891_6.35467395107102_0.313020397617402-3 chr19 28182642 28183538 + 0.313020397617402 NA Intergenic Intergenic -171924 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_100_80_0.0296478963727891_6.35467395107102_0.313020397617402 chr6 17485732 17486782 + 0.313020397617402 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 22300 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_100_80_0.0296478963727891_6.35467395107102_0.313020397617402 chr11 6291515 6292513 + 0.313020397617402 NA promoter-TSS (NM_001361904) promoter-TSS (NM_001361904) -156 NM_001361904 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding common_peak2_101_80_0.0437614771060373_6.36173074143764_0.313020397617402 chr11 68312667 68313835 + 0.313020397617402 NA intron (NM_008744, intron 2 of 6) intron (NM_008744, intron 2 of 6) 73575 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding common_peak2_97_83_-0.06601425898595_6.35931029328579_0.313020397617402 chr4 137499667 137500879 + 0.313020397617402 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 31470 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak2_101_80_0.0437614771060373_6.36173074143764_0.313020397617402-3 chr6 83077818 83079069 + 0.313020397617402 NA promoter-TSS (NM_197992) promoter-TSS (NM_197992) 53 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding common_peak1_97_83_-0.06601425898595_6.35931029328579_0.313020397617402 chr2 180919991 180920934 + 0.313020397617402 NA intron (NM_173761, intron 1 of 4) CpG 474 NM_173761 228994 Mm.30205 NM_173761 ENSMUSG00000038848 Ythdf1 2210410K23Rik|8030473O16 YTH domain family 1 protein-coding common_peak1_100_80_0.0296478963727891_6.35467395107102_0.313020397617402-2 chr12 3572549 3573997 + 0.313020397617402 NA intron (NM_007886, intron 1 of 18) intron (NM_007886, intron 1 of 18) 289 NM_007886 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak2_101_80_0.0437614771060373_6.36173074143764_0.313020397617402-2 chr18 21001906 21002654 + 0.313020397617402 NA intron (NM_207623, intron 1 of 6) CpG 323 NM_001303011 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak1_100_80_0.0296478963727891_6.35467395107102_0.313020397617402-4 chr2 173659885 173660674 + 0.313020397617402 NA promoter-TSS (NR_027957) promoter-TSS (NR_027957) 434 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak2_181_144_0.0331781748678202_7.19649817744885_0.312928846777972 chr19 56988635 56990546 + 0.312928846777972 NA intron (NM_146102, intron 1 of 20) intron (NM_146102, intron 1 of 20) 18985 NM_146102 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding common_peak2_98_84_-0.068544329085733_6.37511877159483_0.312875043295067-2 chr6 146899458 146900677 + 0.312875043295067 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 11573 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_98_84_-0.068544329085733_6.37511877159483_0.312875043295067-3 chr8 72161377 72162073 + 0.312875043295067 NA intron (NM_023126, intron 1 of 7) intron (NM_023126, intron 1 of 7) 525 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak2_102_81_0.0400353604401431_6.37756968483816_0.312875043295067 chr12 104064811 104065645 + 0.312875043295067 NA Intergenic Intergenic -12731 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak1_102_81_0.0400353604401431_6.37756968483816_0.312875043295067-2 chr5 144768248 144769345 + 0.312875043295067 NA promoter-TSS (NM_001081362) promoter-TSS (NM_001081362) 4 NM_001081362 100683 Mm.273570 NM_001081362 ENSMUSG00000045482 Trrap AI481500 transformation/transcription domain-associated protein protein-coding common_peak2_98_84_-0.068544329085733_6.37511877159483_0.312875043295067 chr4 145239820 145240353 + 0.312875043295067 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 6784 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_102_81_0.0400353604401431_6.37756968483816_0.312875043295067 chr3 89997699 89998625 + 0.312875043295067 NA promoter-TSS (NM_001310681) promoter-TSS (NM_001310681) -59 NM_001310681 23897 Mm.256035 NM_011826 ENSMUSG00000027944 Hax1 HAX-1|HSP1BP-1|Hs1bp1|SIG-111|Silg111|mHAX-1s HCLS1 associated X-1 protein-coding common_peak1_98_84_-0.068544329085733_6.37511877159483_0.312875043295067 chr9 71320564 71321400 + 0.312875043295067 NA Intergenic Intergenic 105193 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak2_182_145_0.0311121330770687_7.20538062541855_0.31284789720033 chr16 92622888 92624031 + 0.31284789720033 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 73870 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_177_149_-0.0475664436691972_7.20503546866128_0.31284789720033 chr8 11382946 11384276 + 0.31284789720033 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -70785 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_280_233_-0.0350666483809228_7.85283139539294_0.312806107297451 chr7 90130267 90133483 + 0.312806107297451 NA intron (NM_001360867, intron 1 of 19) intron (NM_001360867, intron 1 of 19) 1662 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-3 chr19 44757973 44758533 + 0.312769113767451 NA intron (NM_011037, intron 1 of 9) intron (NM_011037, intron 1 of 9) 859 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_43_38_-0.106226816265188_5.23228881072965_0.312769113767451 chr11 117260325 117260866 + 0.312769113767451 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -5651 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451 chr17 32363947 32364549 + 0.312769113767451 NA intron (NR_033525, intron 4 of 10) (CGG)n|Simple_repeat|Simple_repeat -13671 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding unique_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451 chr7 67974404 67975381 + 0.312769113767451 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 22635 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_45_36_0.0333999361673047_5.2261533337126_0.312769113767451-3 chr2 170246407 170246916 + 0.312769113767451 NA Intergenic Intergenic -103986 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-3 chr5 116023649 116024398 + 0.312769113767451 NA intron (NM_031869, intron 1 of 6) intron (NM_031869, intron 1 of 6) 405 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak2_45_36_0.0333999361673047_5.2261533337126_0.312769113767451-6 chr7 128745052 128745470 + 0.312769113767451 NA intron (NM_001029982, intron 1 of 18) intron (NM_001029982, intron 1 of 18) 391 NM_001029982 207352 Mm.297105 NM_001029982 ENSMUSG00000055319 Sec23ip D7Ertd373e|p125 Sec23 interacting protein protein-coding common_peak2_45_36_0.0333999361673047_5.2261533337126_0.312769113767451-2 chr2 19658416 19659035 + 0.312769113767451 NA promoter-TSS (NR_033642) promoter-TSS (NR_033642) 663 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-5 chr5 124922444 124923086 + 0.312769113767451 NA Intergenic CYRA11_Mm|Unknown|Y-chromosome 60060 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-2 chr17 33780864 33781393 + 0.312769113767451 NA exon (NM_020581, exon 1 of 7) exon (NM_020581, exon 1 of 7) 447 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-7 chr7 25755506 25756063 + 0.312769113767451 NA TTS (NM_001190974) TTS (NM_001190974) -1025 NM_178089 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak2_45_36_0.0333999361673047_5.2261533337126_0.312769113767451-4 chr3 89246466 89247037 + 0.312769113767451 NA promoter-TSS (NM_183037) promoter-TSS (NM_183037) 278 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak2_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-2 chr5 64866204 64866979 + 0.312769113767451 NA Intergenic Intergenic 63068 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-8 chrX 19158143 19158606 + 0.312769113767451 NA Intergenic Intergenic -11403 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-4 chr4 88773421 88773809 + 0.312769113767451 NA promoter-TSS (NM_001243155) promoter-TSS (NM_001243155) -219 NM_001243155 545646 Mm.380019 NM_001243155 ENSMUSG00000094271 Gm13290 - predicted gene 13290 protein-coding common_peak1_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-6 chr5 135168976 135169554 + 0.312769113767451 NA intron (NM_009745, intron 1 of 5) PB1D7|SINE|Alu 893 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding common_peak2_43_38_-0.106226816265188_5.23228881072965_0.312769113767451-4 chr9 43944586 43945137 + 0.312769113767451 NA Intergenic Intergenic -98523 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak2_45_36_0.0333999361673047_5.2261533337126_0.312769113767451 chr13 25019908 25020319 + 0.312769113767451 NA exon (NM_001013389, exon 1 of 11) exon (NM_001013389, exon 1 of 11) 204 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding common_peak2_45_36_0.0333999361673047_5.2261533337126_0.312769113767451-5 chr5 139150352 139150938 + 0.312769113767451 NA promoter-TSS (NM_001359097) promoter-TSS (NM_001359097) 58 NM_001359097 19085 Mm.306163 NM_008923 ENSMUSG00000025855 Prkar1b AI385716|RIbeta protein kinase, cAMP dependent regulatory, type I beta protein-coding common_peak2_178_150_-0.0491271669885709_7.21384115583079_0.312768041636555-2 chr8 111743118 111744263 + 0.312768041636555 NA exon (NM_009954, exon 1 of 7) exon (NM_009954, exon 1 of 7) 159 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_183_146_0.0290709978134016_7.21420784374306_0.312768041636555 chr5 138994195 138996139 + 0.312768041636555 NA promoter-TSS (NM_008808) promoter-TSS (NM_008808) -214 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_178_150_-0.0491271669885709_7.21384115583079_0.312768041636555 chr13 56134498 56136070 + 0.312768041636555 NA intron (NM_001159513, intron 1 of 8) CpG 266 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak2_99_85_-0.0710208721230341_6.39075431864058_0.312733171082057-2 chr3 98057371 98058272 + 0.312733171082057 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 44283 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_99_85_-0.0710208721230341_6.39075431864058_0.312733171082057 chr4 126320487 126321609 + 0.312733171082057 NA intron (NM_133883, intron 1 of 5) intron (NM_133883, intron 1 of 5) 655 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding common_peak2_103_82_0.0363887839616996_6.39323382332777_0.312733171082057 chr3 38282801 38283872 + 0.312733171082057 NA Intergenic Intergenic -75217 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak1_103_82_0.0363887839616996_6.39323382332777_0.312733171082057 chr2 11602293 11603287 + 0.312733171082057 NA intron (NM_152824, intron 1 of 11) intron (NM_152824, intron 1 of 11) 409 NM_152824 76938 Mm.182769 NM_152824 ENSMUSG00000037197 Rbm17 2700027J02Rik RNA binding motif protein 17 protein-coding common_peak2_99_85_-0.0710208721230341_6.39075431864058_0.312733171082057 chr12 35531824 35533782 + 0.312733171082057 NA intron (NM_001314027, intron 1 of 9) intron (NM_001314027, intron 1 of 9) 2186 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding common_peak1_179_151_-0.05066932516349_7.22259285086184_0.31268925805669 chr8 22592865 22594459 + 0.31268925805669 NA intron (NM_011696, intron 1 of 8) CpG 151 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_185_148_0.0250616417448306_7.23169934133458_0.312611525018734 chr17 34959258 34960936 + 0.312611525018734 NA promoter-TSS (NM_010478) promoter-TSS (NM_010478) -859 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding common_peak1_180_152_-0.0521932526345257_7.23129121637539_0.312611525018734-2 chr19 28558295 28559747 + 0.312611525018734 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -119203 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_180_152_-0.0521932526345257_7.23129121637539_0.312611525018734 chr13 56134443 56136088 + 0.312611525018734 NA intron (NM_001159513, intron 1 of 8) CpG 285 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak1_186_148_0.0327427156803113_7.23553987830232_0.312611525018734 chr9 78480503 78481640 + 0.312611525018734 NA intron (NM_010106, intron 1 of 7) CpG 653 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_100_86_-0.0734455965913146_6.40622069755307_0.312594657326932 chr11 70700253 70701225 + 0.312594657326932 NA promoter-TSS (NM_001252485) promoter-TSS (NM_001252485) 191 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding common_peak1_101_86_-0.0593320158580664_6.41327748791969_0.312594657326932 chr10 43479317 43480461 + 0.312594657326932 NA intron (NM_199028, intron 1 of 3) CpG 749 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak2_101_86_-0.0593320158580664_6.41327748791969_0.312594657326932 chr19 5912048 5912729 + 0.312594657326932 NA intron (NM_011262, intron 1 of 10) CpG 483 NM_011262 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak2_100_86_-0.0734455965913146_6.40622069755307_0.312594657326932-2 chr15 102959485 102960855 + 0.312594657326932 NA Intergenic Intergenic 5644 NM_001024842 109663 Mm.37692 NM_001024842 ENSMUSG00000001656 Hoxc11 Hox-3.7 homeobox C11 protein-coding common_peak2_101_86_-0.0593320158580664_6.41327748791969_0.312594657326932-2 chr2 164879158 164879770 + 0.312594657326932 NA promoter-TSS (NM_146129) promoter-TSS (NM_146129) 96 NM_146129 228866 Mm.241134 NM_146129 ENSMUSG00000039849 Pcif1 2310022K11Rik|C20orf67|F730014I05Rik PDX1 C-terminal inhibiting factor 1 protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-2 chr11 71019764 71020408 + 0.312460117298692 NA promoter-TSS (NM_001291147) promoter-TSS (NM_001291147) -245 NM_001291146 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-8 chr7 109703790 109704270 + 0.312460117298692 NA exon (NM_020616, exon 2 of 6) exon (NM_020616, exon 2 of 6) 293 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-2 chr13 69593893 69594340 + 0.312460117298692 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 17347 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-3 chr13 55535891 55536379 + 0.312460117298692 NA intron (NM_134059, intron 2 of 16) intron (NM_134059, intron 2 of 16) 523 NM_134059 72935 Mm.205045 NM_134059 ENSMUSG00000021494 Ddx41 2900024F02Rik|AA958953|ABS|AI324246 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 protein-coding common_peak1_46_37_0.0257337898584691_5.26079440837282_0.312460117298692 chr10 87879208 87880041 + 0.312460117298692 NA intron (NM_001111274, intron 2 of 4) intron (NM_001111274, intron 2 of 4) 18513 NM_001111276 16000 Mm.268521 NM_010512 ENSMUSG00000020053 Igf1 C730016P09Rik|Igf-1|Igf-I insulin-like growth factor 1 protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-7 chr7 24112422 24113091 + 0.312460117298692 NA intron (NM_021307, intron 1 of 4) intron (NM_021307, intron 1 of 4) 436 NM_021307 57745 Mm.82678 NM_021307 ENSMUSG00000052675 Zfp112 Znf112|Znf228 zinc finger protein 112 protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692 chr10 108377418 108377907 + 0.312460117298692 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 45473 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-8 chr4 53714186 53714873 + 0.312460117298692 NA intron (NM_139309, intron 1 of 9) CpG 347 NM_139309 246179 Mm.247210 NM_139309 ENSMUSG00000028414 Fktn D830030O17Rik|Fcmd fukutin protein-coding common_peak1_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-4 chr16 43698109 43698944 + 0.312460117298692 NA Intergenic B2_Mm2|SINE|B2 -34342 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692 chr18 82488927 82489458 + 0.312460117298692 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 14069 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-10 chr8 120902757 120903423 + 0.312460117298692 NA Intergenic Intergenic 164451 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-7 chr6 39205935 39206443 + 0.312460117298692 NA intron (NM_001033430, intron 1 of 19) CpG 584 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-8 chr8 4258534 4258960 + 0.312460117298692 NA TTS (NM_011592) TTS (NM_011592) 527 NM_183315 330695 Mm.34210 NM_183315 ENSMUSG00000048644 Ctxn1 BC028881|Ctxn cortexin 1 protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-4 chr11 97438806 97439494 + 0.312460117298692 NA Intergenic Intergenic -11010 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-4 chr18 7120405 7121330 + 0.312460117298692 NA intron (NM_001357492, intron 20 of 20) intron (NM_001357492, intron 20 of 20) -116088 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-4 chr13 110927465 110928274 + 0.312460117298692 NA Intergenic Intergenic -24023 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-6 chr17 48410226 48410845 + 0.312460117298692 NA promoter-TSS (NM_001357904) promoter-TSS (NM_001357904) 85 NM_001357904 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-5 chr2 85098704 85099205 + 0.312460117298692 NA Intergenic Intergenic -12493 NR_040504 74687 Mm.66996 NR_040504 ENSMUSG00000086969 4930443O20Rik - RIKEN cDNA 4930443O20 gene ncRNA common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-6 chr4 19525372 19525929 + 0.312460117298692 NA intron (NM_027769, intron 14 of 15) intron (NM_027769, intron 14 of 15) 44458 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding common_peak1_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-5 chr2 91963041 91963568 + 0.312460117298692 NA exon (NM_138306, exon 1 of 31) exon (NM_138306, exon 1 of 31) 259 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-9 chr5 124900573 124901085 + 0.312460117298692 NA Intergenic Intergenic 38124 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-9 chr8 70489194 70489650 + 0.312460117298692 NA Intergenic Intergenic -2064 NM_182991 67937 Mm.23002 NM_182991 ENSMUSG00000035964 Tmem59l 5330410G16Rik transmembrane protein 59-like protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-3 chr11 75651510 75651851 + 0.312460117298692 NA promoter-TSS (NM_001080774) promoter-TSS (NM_001080774) 171 NM_008659 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-2 chr11 109425934 109426704 + 0.312460117298692 NA promoter-TSS (NM_001252193) promoter-TSS (NM_001252193) 99 NM_001252193 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-7 chr2 126310500 126311367 + 0.312460117298692 NA Intergenic Tigger7|DNA|TcMar-Tigger 158792 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak2_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-5 chr15 64365356 64365922 + 0.312460117298692 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 17280 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-3 chr12 86859706 86860176 + 0.312460117298692 NA Intergenic Intergenic 24873 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-6 chr4 151633955 151634692 + 0.312460117298692 NA intron (NM_001081557, intron 3 of 23) intron (NM_001081557, intron 3 of 23) 227445 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-5 chr18 36782602 36783078 + 0.312460117298692 NA promoter-TSS (NM_001305627) promoter-TSS (NM_001305627) 365 NM_008214 15115 Mm.10528 NM_008214 ENSMUSG00000001380 Hars MMHRS histidyl-tRNA synthetase protein-coding common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692-3 chr16 4939185 4939711 + 0.312460117298692 NA non-coding (NR_037666, exon 1 of 3) non-coding (NR_037666, exon 1 of 3) 137 NR_037666 100503704 Mm.480572 NR_037666 ENSMUSG00000097397 Gm16861 - predicted gene, 16861 ncRNA common_peak1_44_39_-0.110559947460779_5.26664812115697_0.312460117298692 chr1 153333168 153333639 + 0.312460117298692 NA promoter-TSS (NM_010683) promoter-TSS (NM_010683) -617 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak2_46_37_0.0257337898584691_5.26079440837282_0.312460117298692 chr1 62767258 62767701 + 0.312460117298692 NA intron (NM_001077404, intron 10 of 16) intron (NM_001077404, intron 10 of 16) 27253 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak1_46_37_0.0257337898584691_5.26079440837282_0.312460117298692-2 chr11 94932973 94933493 + 0.312460117298692 NA Intergenic Intergenic -2991 NM_007742 12842 Mm.277735 NM_007742 ENSMUSG00000001506 Col1a1 Col1a-1|Cola-1|Cola1|Mov-13|Mov13 collagen, type I, alpha 1 protein-coding common_peak2_102_87_-0.0618442535790704_6.42850949184776_0.312459384164289-4 chr6 17491173 17492583 + 0.312459384164289 NA exon (NM_008591, exon 3 of 22) exon (NM_008591, exon 3 of 22) 27921 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_102_87_-0.0618442535790704_6.42850949184776_0.312459384164289 chr6 113470796 113472068 + 0.312459384164289 NA promoter-TSS (NM_134159) promoter-TSS (NM_134159) -23 NM_178942 171095 Mm.213397 NM_134159 ENSMUSG00000030281 Il17rc 1110025H02Rik|Gm19850|IL-17RC|IL17-RC|IL17-RL|Il17rl interleukin 17 receptor C protein-coding common_peak1_102_87_-0.0618442535790704_6.42850949184776_0.312459384164289-2 chr6 113697161 113698140 + 0.312459384164289 NA intron (NM_001347356, intron 1 of 7) CpG 600 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_102_87_-0.0618442535790704_6.42850949184776_0.312459384164289 chr15 86091120 86092342 + 0.312459384164289 NA intron (NM_172611, intron 2 of 18) intron (NM_172611, intron 2 of 18) 33004 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_102_87_-0.0618442535790704_6.42850949184776_0.312459384164289-2 chr16 4587001 4587942 + 0.312459384164289 NA Intergenic Intergenic -7242 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_105_84_0.0293241395589146_6.42405300591716_0.312459384164289 chr16 44723934 44725543 + 0.312459384164289 NA intron (NM_145972, intron 1 of 8) CpG 437 NM_145972 212547 Mm.310573 NM_145972 ENSMUSG00000036208 Nepro - nucleolus and neural progenitor protein protein-coding common_peak2_102_87_-0.0618442535790704_6.42850949184776_0.312459384164289-3 chr3 58691396 58692394 + 0.312459384164289 NA promoter-TSS (NR_045167) promoter-TSS (NR_045167) 493 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding common_peak1_188_150_0.0287461815759666_7.25277783011306_0.312459127620565 chr12 110601475 110604003 + 0.312459127620565 NA intron (NM_030238, intron 1 of 76) intron (NM_030238, intron 1 of 76) 1344 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak1_289_241_-0.0384032762899373_7.89966159912963_0.312411086737013 chr17 34119620 34121079 + 0.312411086737013 NA promoter-TSS (NR_037970) promoter-TSS (NR_037970) -449 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_296_236_0.0258839808079196_7.90168523930222_0.312411086737013 chr3 121722637 121725364 + 0.312411086737013 NA intron (NM_010171, intron 1 of 5) intron (NM_010171, intron 1 of 5) 463 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_106_85_0.0259012823270606_6.43921539586563_0.312327239180854-3 chr7 13009391 13010560 + 0.312327239180854 NA promoter-TSS (NM_001024699) promoter-TSS (NM_001024699) -123 NM_001360833 232879 Mm.279272 NM_001024699 ENSMUSG00000049600 Zbtb45 BB161562|Gm157|Zfp499 zinc finger and BTB domain containing 45 protein-coding common_peak2_107_85_0.0392271166248168_6.44587831301451_0.312327239180854-2 chr2 129197771 129198558 + 0.312327239180854 NA promoter-TSS (NM_001159593) promoter-TSS (NM_001159593) -609 NM_015747 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_106_85_0.0259012823270606_6.43921539586563_0.312327239180854 chr2 127587163 127587928 + 0.312327239180854 NA promoter-TSS (NM_001355622) promoter-TSS (NM_001355622) 119 NM_029963 77721 Mm.274601 NM_029963 ENSMUSG00000027374 Mrps5 1620401I16Rik|AI850294 mitochondrial ribosomal protein S5 protein-coding common_peak1_107_85_0.0392271166248168_6.44587831301451_0.312327239180854 chr9 71215344 71216771 + 0.312327239180854 NA promoter-TSS (NR_110519) promoter-TSS (NR_110519) 268 NM_009022 19378 Mm.42016 NM_009022 ENSMUSG00000013584 Aldh1a2 AV116159|Aldh1a7|Raldh1|Raldh2 aldehyde dehydrogenase family 1, subfamily A2 protein-coding common_peak2_106_85_0.0259012823270606_6.43921539586563_0.312327239180854-2 chr6 34610225 34611247 + 0.312327239180854 NA intron (NM_001347100, intron 1 of 13) MER94|DNA|hAT-Blackjack 12232 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_106_85_0.0259012823270606_6.43921539586563_0.312327239180854 chr3 131364220 131365754 + 0.312327239180854 NA Intergenic Intergenic -20064 NM_028943 74442 Mm.273360 NM_028943 ENSMUSG00000050931 Sgms2 4933405A16Rik|5133401H06Rik|AI854299 sphingomyelin synthase 2 protein-coding common_peak2_107_85_0.0392271166248168_6.44587831301451_0.312327239180854 chr1 74303554 74304616 + 0.312327239180854 NA intron (NM_027154, intron 1 of 11) CpG 251 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_103_88_-0.0643052156577735_6.44358082313751_0.312327239180829 chr9 86695195 86696545 + 0.312327239180829 NA promoter-TSS (NM_008615) promoter-TSS (NM_008615) 44 NM_008615 17436 Mm.148155 NM_008615 ENSMUSG00000032418 Me1 D9Ertd267e|Mdh-1|Mod-1|Mod1 malic enzyme 1, NADP(+)-dependent, cytosolic protein-coding common_peak2_185_156_-0.0503905866846353_7.26942545554931_0.31231068893489 chr7 122969344 122971015 + 0.31231068893489 NA promoter-TSS (NM_011247) promoter-TSS (NM_011247) 280 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak1_187_157_-0.0442294040215367_7.28166604616633_0.312237906215853 chr6 91210138 91212069 + 0.312237906215853 NA Intergenic Intergenic -1661 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak2_104_89_-0.0667164811296601_6.45849485576484_0.31219811510315 chr8 57651806 57652486 + 0.31219811510315 NA intron (NR_040698, intron 1 of 3) CpG 393 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA common_peak2_108_86_0.0357513892797181_6.46081919048859_0.31219811510315 chr12 4592549 4593689 + 0.31219811510315 NA 5' UTR (NM_001198968, exon 1 of 40) 5' UTR (NM_001198968, exon 1 of 40) 111 NM_001198968 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-8 chr7 130866132 130866715 + 0.312166972154323 NA intron (NM_133942, intron 1 of 9) CpG 699 NM_001346515 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding common_peak1_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-4 chr2 126677739 126678716 + 0.312166972154323 NA Intergenic Intergenic -1890 NM_001271470 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak1_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-5 chr5 125165170 125165998 + 0.312166972154323 NA intron (NM_001253905, intron 1 of 42) intron (NM_001253905, intron 1 of 42) 13630 NM_001253905 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-5 chr7 28930996 28931506 + 0.312166972154323 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 31081 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-6 chr8 27057373 27057886 + 0.312166972154323 NA Intergenic Intergenic 15074 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-5 chr3 88775336 88775864 + 0.312166972154323 NA Intergenic B1_Mus1|SINE|Alu -1457 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-7 chr7 80773695 80774216 + 0.312166972154323 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 29376 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-3 chr2 70090167 70090611 + 0.312166972154323 NA intron (NM_177376, intron 2 of 34) intron (NM_177376, intron 2 of 34) 51263 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak1_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-2 chr15 85037201 85037626 + 0.312166972154323 NA intron (NM_001356618, intron 1 of 9) intron (NM_001356618, intron 1 of 9) 351 NM_001356618 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak2_45_40_-0.114698702821829_5.30020265320717_0.312166972154323 chr11 69633062 69633544 + 0.312166972154323 NA 5' UTR (NM_011814, exon 1 of 17) 5' UTR (NM_011814, exon 1 of 17) 332 NM_011814 23879 Mm.41930 NM_011814 ENSMUSG00000018765 Fxr2 Fxr2h fragile X mental retardation, autosomal homolog 2 protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-9 chr7 84503715 84504505 + 0.312166972154323 NA Intergenic Intergenic -24844 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak1_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-3 chr18 56974889 56975394 + 0.312166972154323 NA intron (NM_029909, intron 1 of 4) CpG 238 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding common_peak2_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-2 chr11 119856921 119857426 + 0.312166972154323 NA intron (NM_028898, intron 18 of 33) intron (NM_028898, intron 18 of 33) -22808 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-2 chr13 50417948 50418510 + 0.312166972154323 NA intron (NR_154272, intron 1 of 10) intron (NR_154272, intron 1 of 10) 365 NR_154273 109082 Mm.18638 NM_175401 ENSMUSG00000037816 Fbxw17 1110064L07Rik|C85886 F-box and WD-40 domain protein 17 protein-coding common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-6 chr4 132535589 132536014 + 0.312166972154323 NA promoter-TSS (NM_007512) promoter-TSS (NM_007512) 242 NM_172400 68598 Mm.29685 NM_172400 ENSMUSG00000054405 Dnajc8 1110021D09Rik|2010009J04Rik|AL024084|AU019262|AU044514 DnaJ heat shock protein family (Hsp40) member C8 protein-coding common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-9 chr9 98313646 98314165 + 0.312166972154323 NA intron (NM_001357445, intron 1 of 3) intron (NM_001357445, intron 1 of 3) 17335 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak1_45_40_-0.114698702821829_5.30020265320717_0.312166972154323 chr1 151228160 151228675 + 0.312166972154323 NA Intergenic Intergenic 90383 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-7 chr5 148362196 148362617 + 0.312166972154323 NA intron (NM_007513, intron 2 of 12) intron (NM_007513, intron 2 of 12) 30409 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-6 chr8 122442763 122443353 + 0.312166972154323 NA promoter-TSS (NR_045696) promoter-TSS (NR_045696) 364 NM_138656 192156 Mm.28146 NM_138656 ENSMUSG00000006517 Mvd C78718|Mpd mevalonate (diphospho) decarboxylase protein-coding common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-3 chr15 100204804 100205255 + 0.312166972154323 NA intron (NM_172819, intron 27 of 32) intron (NM_172819, intron 27 of 32) -16993 NR_037311 100499528 NR_037311 ENSMUSG00000092752 Mir3473a Mir3473|mir-3473a|mmu-mir-3473|mmu-mir-3473a microRNA 3473a ncRNA common_peak2_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-5 chr3 5576377 5576829 + 0.312166972154323 NA promoter-TSS (NM_001163301) promoter-TSS (NM_001163301) -355 NM_008994 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding unique_peak2_45_40_-0.114698702821829_5.30020265320717_0.312166972154323 chr15 25577220 25577796 + 0.312166972154323 NA Intergenic Intergenic -45042 NM_019472 17909 Mm.60590 NM_019472 ENSMUSG00000022272 Myo10 AW048724|D15Ertd600e|mKIAA0799|myosin-X myosin X protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-3 chr2 125472118 125472911 + 0.312166972154323 NA intron (NM_007993, intron 4 of 65) intron (NM_007993, intron 4 of 65) 33924 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-6 chr5 113901865 113902752 + 0.312166972154323 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 6398 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-4 chr17 3418916 3419469 + 0.312166972154323 NA intron (NM_011878, intron 3 of 26) intron (NM_011878, intron 3 of 26) 21985 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-7 chrX 137037852 137038504 + 0.312166972154323 NA intron (NM_001082412, intron 1 of 6) CpG 124 NM_001082412 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-2 chr11 95099934 95100837 + 0.312166972154323 NA Intergenic Intergenic -19732 NM_010055 13393 Mm.5194 NM_010055 ENSMUSG00000001510 Dlx3 AV237891|Dlx-3 distal-less homeobox 3 protein-coding common_peak1_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-3 chr19 32485972 32486392 + 0.312166972154323 NA exon (NM_010799, exon 1 of 5) exon (NM_010799, exon 1 of 5) 413 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-10 chr8 22540289 22540747 + 0.312166972154323 NA intron (NM_011394, intron 4 of 10) intron (NM_011394, intron 4 of 10) 53295 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-4 chr3 37728486 37729052 + 0.312166972154323 NA Intergenic Intergenic -4409 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323 chr13 48228042 48228551 + 0.312166972154323 NA intron (NR_102303, intron 1 of 2) intron (NR_102303, intron 1 of 2) -33131 NM_031166 15904 Mm.458006 NM_031166 ENSMUSG00000021379 Id4 Idb4|bHLHb27 inhibitor of DNA binding 4 protein-coding common_peak2_45_40_-0.114698702821829_5.30020265320717_0.312166972154323-4 chr2 173218575 173219529 + 0.312166972154323 NA promoter-TSS (NM_021394) promoter-TSS (NM_021394) -130 NM_001139519 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding common_peak1_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-2 chr14 32202013 32202488 + 0.312166972154323 NA promoter-TSS (NM_016897) promoter-TSS (NM_016897) 279 NM_011960 26430 Mm.15962 NM_011960 ENSMUSG00000021911 Parg AI413217 poly (ADP-ribose) glycohydrolase protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-2 chr2 93045735 93046397 + 0.312166972154323 NA promoter-TSS (NM_001177536) promoter-TSS (NM_001177536) 78 NM_001177536 100042784 Mm.102816 NM_001177536 ENSMUSG00000075028 Prdm11 8030443D09Rik|AA163972|Gm707 PR domain containing 11 protein-coding common_peak1_47_38_0.0184184480097569_5.29461144286713_0.312166972154323 chr11 71019693 71020294 + 0.312166972154323 NA promoter-TSS (NM_001291147) promoter-TSS (NM_001291147) -152 NM_001291146 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-4 chr3 79559095 79559873 + 0.312166972154323 NA intron (NM_001162999, intron 1 of 16) intron (NM_001162999, intron 1 of 16) 8195 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-5 chr6 117905815 117906458 + 0.312166972154323 NA promoter-TSS (NM_001166431) promoter-TSS (NM_001166431) -646 NM_001166430 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323 chr12 111304505 111305261 + 0.312166972154323 NA intron (NM_183016, intron 26 of 36) intron (NM_183016, intron 26 of 36) 33787 NM_033603 93835 Mm.197639 NM_033603 ENSMUSG00000021278 Amn - amnionless protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-3 chr13 23445069 23446025 + 0.312166972154323 NA Intergenic PB1D7|SINE|Alu -14530 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak2_47_38_0.0184184480097569_5.29461144286713_0.312166972154323-5 chr2 91963002 91963580 + 0.312166972154323 NA exon (NM_138306, exon 1 of 31) exon (NM_138306, exon 1 of 31) 272 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak2_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-4 chr3 108561976 108562327 + 0.312166972154323 NA intron (NM_026198, intron 1 of 2) intron (NM_026198, intron 1 of 2) 315 NM_026198 67495 Mm.32615 NM_026198 ENSMUSG00000068732 Tmem167b 2010200O16Rik transmembrane protein 167B protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323-8 chr6 88903253 88903959 + 0.312166972154323 NA intron (NM_011906, intron 1 of 11) intron (NM_011906, intron 1 of 11) 1355 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_48_38_0.0479559245038059_5.30938018111415_0.312166972154323 chr10 111164928 111165569 + 0.312166972154323 NA intron (NM_001003717, intron 1 of 22) CpG 446 NM_175489 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding common_peak2_188_158_-0.0457320343833105_7.2900169380927_0.312166056686052 chr2 117729694 117732646 + 0.312166056686052 NA Intergenic Intergenic 81632 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_109_87_0.0323457031403969_6.4756044702075_0.312071909507904 chr13 51887215 51888310 + 0.312071909507904 NA Intergenic Intergenic 41087 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_109_87_0.0323457031403969_6.4756044702075_0.312071909507904 chr18 75457039 75457865 + 0.312071909507904 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -57193 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_105_90_-0.0690795645020801_6.47325485794766_0.312071909507879-3 chr4 134631836 134632926 + 0.312071909507879 NA intron (NM_207237, intron 2 of 11) intron (NM_207237, intron 2 of 11) -64530 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA common_peak2_105_90_-0.0690795645020801_6.47325485794766_0.312071909507879-2 chr4 98395625 98396773 + 0.312071909507879 NA intron (NM_001005784, intron 1 of 19) CpG 373 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding common_peak2_105_90_-0.0690795645020801_6.47325485794766_0.312071909507879 chr19 43675148 43676124 + 0.312071909507879 NA promoter-TSS (NM_145156) promoter-TSS (NM_145156) 458 NR_045645 100502982 Mm.313570 NR_045645 BC037704 - cDNA sequence BC037704 ncRNA common_peak1_440_351_0.0214877700371794_8.47017550365589_0.312071512963168 chr10 128920355 128924151 + 0.312071512963168 NA intron (NM_015740, intron 2 of 3) intron (NM_015740, intron 2 of 3) 1271 NM_015740 14533 Mm.30118 NM_015740 ENSMUSG00000090247 Bloc1s1 AI839753|BLOS1|Gcn5l1 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding common_peak1_110_88_0.0290079327452553_6.49023739733903_0.3119485245501 chr2 91648986 91650001 + 0.3119485245501 NA promoter-TSS (NR_027371) promoter-TSS (NR_027371) 298 NM_001347175 381410 Mm.330401 NM_001033451 ENSMUSG00000075040 Zfp408 Gm1011 zinc finger protein 408 protein-coding common_peak2_106_91_-0.0713959190278546_6.48786399654309_0.3119485245501 chr12 32378716 32380166 + 0.3119485245501 NA exon (NM_001162903, exon 1 of 1) exon (NM_001162903, exon 1 of 1) 652 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding common_peak2_106_91_-0.0713959190278546_6.48786399654309_0.3119485245501-2 chr15 86184980 86186117 + 0.3119485245501 NA promoter-TSS (NR_155352) promoter-TSS (NR_155352) -180 NR_155352 102638208 Mm.415090 NR_155352 ENSMUSG00000086424 Gm15569 - predicted gene 15569 ncRNA common_peak2_107_91_-0.0580700847300983_6.49452691369196_0.3119485245501 chr3 55112175 55112981 + 0.3119485245501 NA intron (NM_001144987, intron 1 of 8) intron (NM_001144987, intron 1 of 8) 412 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|Spart|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622 chr12 110889291 110889824 + 0.311888488969622 NA promoter-TSS (NM_027223) promoter-TSS (NM_027223) 293 NM_001081057 104859 Mm.35583 NM_175336 ENSMUSG00000021275 Tecpr2 4930573I19Rik|AI604920|mKIAA0297 tectonin beta-propeller repeat containing 2 protein-coding common_peak1_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-2 chr12 78225922 78226564 + 0.311888488969622 NA promoter-TSS (NM_145965) promoter-TSS (NM_145965) -412 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622-2 chr10 120809698 120810371 + 0.311888488969622 NA intron (NM_177092, intron 5 of 6) intron (NM_177092, intron 5 of 6) 44302 NR_038003 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-6 chr3 27859164 27859794 + 0.311888488969622 NA Intergenic Intergenic 36889 NM_001164437 208613 Mm.59189 NM_001164437 ENSMUSG00000043164 Tmem212 E030011K20Rik|Gm564 transmembrane protein 212 protein-coding common_peak1_49_39_0.040370767264946_5.34211347851984_0.311888488969622-2 chr12 104416065 104416687 + 0.311888488969622 NA Intergenic IMPB_01|Satellite|Satellite 9668 NM_009252 20716 Mm.482074 NM_009252 ENSMUSG00000021091 Serpina3n Spi2-2|Spi2.2|Spi2/eb.4 serine (or cysteine) peptidase inhibitor, clade A, member 3N protein-coding common_peak1_49_39_0.040370767264946_5.34211347851984_0.311888488969622-5 chr5 34535222 34535819 + 0.311888488969622 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -7845 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622-3 chr11 116143029 116143629 + 0.311888488969622 NA 3' UTR (NM_172571, exon 31 of 31) 3' UTR (NM_172571, exon 31 of 31) -4461 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak1_49_39_0.040370767264946_5.34211347851984_0.311888488969622-4 chr3 152568268 152568807 + 0.311888488969622 NA intron (NM_001355635, intron 6 of 8) intron (NM_001355635, intron 6 of 8) -98376 NR_040386 99542 Mm.394921 NR_040386 ENSMUSG00000097745 AI115009 - expressed sequence AI115009 ncRNA common_peak1_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-4 chr4 152027060 152027597 + 0.311888488969622 NA TTS (NM_031867) TTS (NM_031867) 343 NM_133879 100090 Mm.24661 NM_133879 ENSMUSG00000028952 Zbtb48 0610011D15Rik|AI327031|Hkr3|TZAP zinc finger and BTB domain containing 48 protein-coding common_peak1_46_41_-0.118656119476706_5.33298936304041_0.311888488969622 chr1 193568926 193569617 + 0.311888488969622 NA Intergenic Intergenic -61741 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-4 chr16 4939206 4939769 + 0.311888488969622 NA promoter-TSS (NR_037666) promoter-TSS (NR_037666) 98 NR_037666 100503704 Mm.480572 NR_037666 ENSMUSG00000097397 Gm16861 - predicted gene, 16861 ncRNA common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622-4 chr13 54610798 54611276 + 0.311888488969622 NA intron (NM_028870, intron 1 of 4) CpG 336 NM_028870 74325 Mm.290026 NM_028870 ENSMUSG00000047547 Cltb 2310046E19Rik|lcb clathrin, light polypeptide (Lcb) protein-coding common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622-5 chr15 81729290 81729917 + 0.311888488969622 NA intron (NM_011241, intron 1 of 16) CpG 316 NM_011241 19387 Mm.270975 NM_011241 ENSMUSG00000022391 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 protein-coding common_peak1_49_39_0.040370767264946_5.34211347851984_0.311888488969622 chr10 111579429 111580133 + 0.311888488969622 NA Intergenic Intergenic 14492 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-2 chr13 31166769 31167593 + 0.311888488969622 NA Intergenic Intergenic 73905 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-7 chr4 143288828 143289600 + 0.311888488969622 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 10350 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding common_peak1_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-6 chr8 102783153 102783612 + 0.311888488969622 NA intron (NM_009866, intron 1 of 12) intron (NM_009866, intron 1 of 12) 1729 NM_009866 12552 Mm.1571 NM_009866 ENSMUSG00000031673 Cdh11 Cad11|OSF-4 cadherin 11 protein-coding common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622-6 chr15 101995805 101996431 + 0.311888488969622 NA TTS (NM_031170) TTS (NM_031170) 8224 NM_031170 16691 Mm.358618 NM_031170 ENSMUSG00000049382 Krt8 AA960620|AL022697|AU019895|Card2|EndoA|K8|Krt-2.8|Krt2-8 keratin 8 protein-coding common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622 chr1 86153800 86154515 + 0.311888488969622 NA promoter-TSS (NM_001310702) promoter-TSS (NM_001310702) -623 NM_030184 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak2_49_39_0.040370767264946_5.34211347851984_0.311888488969622-7 chr17 31296278 31296925 + 0.311888488969622 NA 5' UTR (NM_001242427, exon 1 of 20) 5' UTR (NM_001242427, exon 1 of 20) 377 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-5 chr2 84635159 84635633 + 0.311888488969622 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 14084 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak1_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-3 chr16 4598292 4599283 + 0.311888488969622 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 4074 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-9 chr8 88199946 88200447 + 0.311888488969622 NA exon (NM_001164497, exon 2 of 13) exon (NM_001164497, exon 2 of 13) 983 NM_001164498 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding common_peak1_49_39_0.040370767264946_5.34211347851984_0.311888488969622-3 chr13 42049422 42050264 + 0.311888488969622 NA Intergenic Intergenic -2178 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-8 chr6 83775182 83775754 + 0.311888488969622 NA intron (NM_009357, intron 1 of 5) intron (NM_009357, intron 1 of 5) 344 NM_009357 21766 Mm.28371 NM_009357 ENSMUSG00000014748 Tex261 3110001O07Rik|AA409339|AI480706|AL033351|TEG-261 testis expressed gene 261 protein-coding common_peak2_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-3 chr14 33335369 33335739 + 0.311888488969622 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 75470 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak1_46_41_-0.118656119476706_5.33298936304041_0.311888488969622-5 chr5 116023667 116024494 + 0.311888488969622 NA intron (NM_031869, intron 1 of 6) intron (NM_031869, intron 1 of 6) 348 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak2_108_92_-0.0604639259795849_6.50892684811824_0.31182786671047 chr1 72711293 72712246 + 0.31182786671047 NA exon (NM_009084, exon 2 of 4) exon (NM_009084, exon 2 of 4) 509 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak1_111_89_0.0257360383157614_6.50472111548756_0.311827866710446 chr3 31093764 31094384 + 0.311827866710446 NA promoter-TSS (NM_011386) promoter-TSS (NM_011386) -984 NM_001039090 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak2_111_89_0.0257360383157614_6.50472111548756_0.311827866710446 chr19 27216632 27218156 + 0.311827866710446 NA 5' UTR (NM_013703, exon 1 of 19) 5' UTR (NM_013703, exon 1 of 19) 374 NM_001161420 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak2_112_89_0.0384696053305769_6.51108789899496_0.311827866710446 chr10 81627052 81628107 + 0.311827866710446 NA promoter-TSS (NM_027480) promoter-TSS (NM_027480) 29 NM_181586 50721 Mm.25643 NM_181586 ENSMUSG00000034748 Sirt6 2810449N18Rik|AI043036|Sir2l6 sirtuin 6 protein-coding common_peak1_112_89_0.0384696053305769_6.51108789899496_0.311827866710446 chr10 81627042 81628129 + 0.311827866710446 NA promoter-TSS (NM_027480) promoter-TSS (NM_027480) 23 NM_181586 50721 Mm.25643 NM_181586 ENSMUSG00000034748 Sirt6 2810449N18Rik|AI043036|Sir2l6 sirtuin 6 protein-coding common_peak2_194_163_-0.0456312883281251_7.33473636045402_0.311820198205241 chr19 57361021 57362231 + 0.311820198205241 NA promoter-TSS (NR_040316) promoter-TSS (NR_040316) 617 NM_145505 226252 Mm.358870 NM_145505 ENSMUSG00000033478 Fam160b1 AI450540|mKIAA1600 family with sequence similarity 160, member B1 protein-coding common_peak2_200_160_0.0244167621799818_7.34312525920461_0.311753588621908 chr2 38511343 38513580 + 0.311753588621908 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 585 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_200_160_0.0244167621799818_7.34312525920461_0.311753588621908 chr2 30708292 30709369 + 0.311753588621908 NA Intergenic Intergenic -12380 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_109_93_-0.0628115298999434_6.52318308672767_0.311709846559143 chr19 8898141 8899001 + 0.311709846559143 NA TTS (NM_176843) TTS (NM_176843) 514 NM_008060 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding common_peak2_113_90_0.0351494370006602_6.52536935869903_0.311709846559118 chr7 5079788 5080908 + 0.311709846559118 NA TTS (NM_133671) TTS (NM_133671) 113 NM_001252454 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding common_peak2_196_165_-0.0485010692722492_7.3507888967108_0.311687796396055 chr10 128909852 128911761 + 0.311687796396055 NA intron (NM_007653, intron 2 of 7) intron (NM_007653, intron 2 of 7) 940 NM_007653 12512 Mm.371552 NM_007653 ENSMUSG00000025351 Cd63 C75951|ME491|Tspan30 CD63 antigen protein-coding common_peak2_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992-2 chr14 104522215 104522996 + 0.311623594475992 NA promoter-TSS (NM_026047) promoter-TSS (NM_026047) 61 NM_026047 72486 Mm.291811 NM_026047 ENSMUSG00000022120 Rnf219 2610206B13Rik|2810449K13Rik|AI451544 ring finger protein 219 protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992-6 chr18 42261642 42262119 + 0.311623594475992 NA intron (NM_134137, intron 1 of 31) intron (NM_134137, intron 1 of 31) 191 NM_134137 107045 Mm.312170 NM_134137 ENSMUSG00000024493 Lars 2310045K21Rik|3110009L02Rik|AW536573|mKIAA1352 leucyl-tRNA synthetase protein-coding common_peak1_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992-3 chr12 110889237 110889869 + 0.311623594475992 NA promoter-TSS (NM_027223) promoter-TSS (NM_027223) 289 NM_001081057 104859 Mm.35583 NM_175336 ENSMUSG00000021275 Tecpr2 4930573I19Rik|AI604920|mKIAA0297 tectonin beta-propeller repeat containing 2 protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-3 chr3 94757604 94758095 + 0.311623594475992 NA Intergenic CpG 28666 NM_001293727 70737 Mm.87634 NM_001037711 ENSMUSG00000068876 Cgn 6330408J11Rik cingulin protein-coding common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-7 chr2 27739667 27740382 + 0.311623594475992 NA intron (NM_001290481, intron 2 of 9) intron (NM_001290481, intron 2 of 9) 29441 NM_001290482 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992 chr10 98915263 98915900 + 0.311623594475992 NA intron (NM_001359507, intron 1 of 21) CpG 429 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-7 chr8 27057367 27057913 + 0.311623594475992 NA Intergenic Intergenic 15085 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-4 chr3 127779829 127780501 + 0.311623594475992 NA 5' UTR (NM_027808, exon 1 of 14) 5' UTR (NM_027808, exon 1 of 14) 362 NM_027808 71481 Mm.158704 NM_027808 ENSMUSG00000028028 Alpk1 8430410J10Rik|LAK alpha-kinase 1 protein-coding common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-6 chr15 77795788 77796432 + 0.311623594475992 NA intron (NM_022410, intron 4 of 40) intron (NM_022410, intron 4 of 40) -39100 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-8 chrX 74248900 74249724 + 0.311623594475992 NA Intergenic Intergenic -2778 NM_001290421 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992-3 chr13 45911336 45911838 + 0.311623594475992 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 53404 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992-5 chr17 12328047 12328796 + 0.311623594475992 NA Intergenic Intergenic 9568 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-4 chr11 58171814 58172363 + 0.311623594475992 NA intron (NM_175001, intron 2 of 6) intron (NM_175001, intron 2 of 6) 434 NM_175001 216767 Mm.259907 NM_175001 ENSMUSG00000020514 Mrpl22 E030011D16Rik|HSPC158|MRP-L25|Rpml25 mitochondrial ribosomal protein L22 protein-coding common_peak1_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-4 chr19 4334214 4334626 + 0.311623594475992 NA intron (NM_001001984, intron 12 of 20) intron (NM_001001984, intron 12 of 20) -28198 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992-2 chr12 21111790 21112577 + 0.311623594475992 NA intron (NM_001004364, intron 1 of 26) CpG 427 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992 chr11 120256595 120256944 + 0.311623594475992 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 23822 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992-4 chr8 36690294 36690773 + 0.311623594475992 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 42521 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-3 chr13 103333779 103334438 + 0.311623594475992 NA exon (NM_175171, exon 1 of 29) exon (NM_175171, exon 1 of 29) 384 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-3 chr10 111936075 111936747 + 0.311623594475992 NA Intergenic Intergenic -36284 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-2 chr2 115779648 115780568 + 0.311623594475992 NA Intergenic Intergenic 141383 NR_035476 100316703 NR_035476 ENSMUSG00000088606 Mir1951 mir-1951|mmu-mir-1951 microRNA 1951 ncRNA common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-8 chr5 52783113 52783828 + 0.311623594475992 NA intron (NM_030185, intron 1 of 11) intron (NM_030185, intron 1 of 11) 415 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding common_peak1_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-2 chr13 19618996 19619564 + 0.311623594475992 NA intron (NM_134065, intron 1 of 2) CpG 550 NM_134065 105298 Mm.275054 NM_134065 ENSMUSG00000002808 Epdr1 AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1 ependymin related protein 1 (zebrafish) protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-6 chr4 130175449 130175917 + 0.311623594475992 NA promoter-TSS (NM_023476) promoter-TSS (NM_023476) -561 NM_023476 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak2_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992-3 chr16 85148233 85148702 + 0.311623594475992 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 25240 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992 chr16 35363318 35363742 + 0.311623594475992 NA intron (NM_133704, intron 1 of 6) CpG 388 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak1_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992-2 chr11 121646843 121647379 + 0.311623594475992 NA intron (NM_178664, intron 4 of 12) intron (NM_178664, intron 4 of 12) 26040 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992 chr1 91822968 91823447 + 0.311623594475992 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 21746 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992-4 chr14 69691854 69692454 + 0.311623594475992 NA promoter-TSS (NR_105915) promoter-TSS (NR_105915) -94 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak1_47_42_-0.122444087830092_5.36504271078705_0.311623594475992 chr10 111936066 111936892 + 0.311623594475992 NA Intergenic Intergenic -36216 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-5 chr15 58033980 58034429 + 0.311623594475992 NA promoter-TSS (NM_029418) promoter-TSS (NM_029418) 90 NM_029418 75758 Mm.455792 NM_029418 ENSMUSG00000101892 9130401M01Rik AI849328 RIKEN cDNA 9130401M01 gene protein-coding common_peak2_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992-4 chr7 128318672 128319181 + 0.311623594475992 NA Intergenic Intergenic -20795 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_47_42_-0.122444087830092_5.36504271078705_0.311623594475992-2 chr1 193399043 193399510 + 0.311623594475992 NA Intergenic Intergenic -28994 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_50_40_0.0331144549458227_5.374109232091_0.311623594475992-5 chr3 142527755 142528638 + 0.311623594475992 NA Intergenic Intergenic -2140 NM_001083312 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_48_42_-0.0929066113360433_5.37981144903408_0.311623594475992 chr11 60454303 60455095 + 0.311623594475992 NA exon (NM_021354, exon 1 of 13) exon (NM_021354, exon 1 of 13) 108 NM_021354 13495 Mm.41803 NM_021354 ENSMUSG00000020537 Drg2 AI255295|AI461605|DRG-2 developmentally regulated GTP binding protein 2 protein-coding common_peak2_50_40_0.0331144549458227_5.374109232091_0.311623594475992-7 chr19 4455253 4456117 + 0.311623594475992 NA intron (NM_134164, intron 4 of 7) RLTR28|LTR|ERVL 16126 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_198_166_-0.0426959401260998_7.362356322411_0.311622806574442 chr5 115534438 115536286 + 0.311622806574442 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -24105 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_198_166_-0.0426959401260998_7.362356322411_0.311622806574442-2 chr8 128665248 128666988 + 0.311622806574442 NA Intergenic Intergenic -19536 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_110_94_-0.0651142446192949_6.5372984860213_0.311594378534172 chr13 70730322 70731386 + 0.311594378534172 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -93220 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak2_110_94_-0.0651142446192949_6.5372984860213_0.311594378534172-2 chr19 45047235 45048114 + 0.311594378534172 NA promoter-TSS (NM_001178013) promoter-TSS (NM_001178013) 98 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak1_110_94_-0.0651142446192949_6.5372984860213_0.311594378534172 chr18 35771636 35772772 + 0.311594378534172 NA intron (NM_019912, intron 1 of 6) intron (NM_019912, intron 1 of 6) 645 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding common_peak1_114_91_0.0318932649198755_6.53950858851695_0.311594378534148-2 chr8 119685811 119687182 + 0.311594378534148 NA intron (NM_023395, intron 6 of 6) intron (NM_023395, intron 6 of 6) -13513 NM_026922 69047 Mm.46251 NM_026922 ENSMUSG00000034112 Atp2c2 1810010G06Rik|Spca2|mKIAA0703 ATPase, Ca++ transporting, type 2C, member 2 protein-coding common_peak1_114_91_0.0318932649198755_6.53950858851695_0.311594378534148 chr1 38987715 38989078 + 0.311594378534148 NA intron (NM_026850, intron 1 of 5) intron (NM_026850, intron 1 of 5) 582 NM_026850 68833 Mm.28121 NM_026850 ENSMUSG00000026078 Pdcl3 1110061A19Rik|C80025|Viaf1 phosducin-like 3 protein-coding common_peak1_115_92_0.0286992306959908_6.55350842645603_0.311481380734784 chr5 93267226 93268433 + 0.311481380734784 NA intron (NM_007635, intron 1 of 7) CpG 256 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_115_92_0.0286992306959908_6.55350842645603_0.311481380734784-2 chr6 17485700 17487107 + 0.311481380734784 NA intron (NM_008591, intron 1 of 21) intron (NM_008591, intron 1 of 21) 22446 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_112_95_-0.0546397990609044_6.5576426011907_0.311481380734735 chr15 27466708 27467595 + 0.311481380734735 NA intron (NM_020332, intron 1 of 11) CpG 474 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-15 chr7 89403439 89403630 + 0.31137425193576 NA promoter-TSS (NM_008055) promoter-TSS (NM_008055) 688 NM_001360746 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-11 chr13 45910870 45911063 + 0.31137425193576 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 54025 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-11 chr2 30693637 30693858 + 0.31137425193576 NA Intergenic Intergenic -15736 NR_136917 665635 Mm.450149 NR_136917 Gm14486 - predicted gene 14486 ncRNA unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-9 chr2 137675862 137676053 + 0.31137425193576 NA Intergenic Intergenic -559437 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-12 chr3 95624494 95624721 + 0.31137425193576 NA promoter-TSS (NM_019561) promoter-TSS (NM_019561) -373 NM_019561 56205 Mm.241365 NM_019561 ENSMUSG00000038619 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-5 chr11 19994027 19994223 + 0.31137425193576 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 69683 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-5 chr13 23898796 23899084 + 0.31137425193576 NA intron (NM_177016, intron 11 of 11) intron (NM_177016, intron 11 of 11) 16067 NM_177016 319848 Mm.97959 NM_177016 ENSMUSG00000021336 Slc17a4 9130214H05Rik solute carrier family 17 (sodium phosphate), member 4 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-8 chr19 10098860 10099084 + 0.31137425193576 NA intron (NM_019699, intron 1 of 11) intron (NM_019699, intron 1 of 11) 2531 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-2 chr1 119526746 119526987 + 0.31137425193576 NA exon (NM_146103, exon 1 of 1) exon (NM_146103, exon 1 of 1) 712 NM_146103 226351 Mm.439806 NM_146103 ENSMUSG00000098923 Tmem185b 2500001K11Rik transmembrane protein 185B protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-17 chr4 148509810 148510052 + 0.31137425193576 NA intron (NM_020009, intron 28 of 57) intron (NM_020009, intron 28 of 57) -9469 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576 chr1 43257567 43257807 + 0.31137425193576 NA Intergenic Intergenic -60926 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-9 chr5 125340792 125341020 + 0.31137425193576 NA 5' UTR (NM_001205082, exon 1 of 12) 5' UTR (NM_001205082, exon 1 of 12) 188 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-17 chr8 22535112 22535326 + 0.31137425193576 NA 5' UTR (NM_011394, exon 2 of 11) 5' UTR (NM_011394, exon 2 of 11) -58340 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-10 chr5 135912357 135912730 + 0.31137425193576 NA intron (NM_018871, intron 1 of 1) B3|SINE|B2 22098 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-22 chr5 143316636 143316834 + 0.31137425193576 NA exon (NM_028379, exon 8 of 8) exon (NM_028379, exon 8 of 8) -1375 NM_172726 231868 Mm.440105 NM_172726 ENSMUSG00000039244 E130309D02Rik A630028N22 RIKEN cDNA E130309D02 gene protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-12 chr3 119499087 119499350 + 0.31137425193576 NA Intergenic Intergenic 284170 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-22 chr9 67123509 67123822 + 0.31137425193576 NA Intergenic Intergenic -9896 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-2 chr13 5822945 5823147 + 0.31137425193576 NA Intergenic Intergenic 35046 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-21 chr4 58186897 58187158 + 0.31137425193576 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 19569 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-5 chr10 117521345 117521565 + 0.31137425193576 NA Intergenic Intergenic -74020 NR_152734 102634600 Mm.399106 NR_152734 ENSMUSG00000112344 Gm32141 - predicted gene, 32141 ncRNA common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-5 chr12 82171436 82171648 + 0.31137425193576 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 1526 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-24 chrX 164065543 164065765 + 0.31137425193576 NA Intergenic Intergenic 10481 NM_001308386 20438 Mm.37215 NM_009173 ENSMUSG00000040749 Siah1b AA960570|Sinh1b|siah-1b siah E3 ubiquitin protein ligase 1B protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-15 chr6 115316173 115316413 + 0.31137425193576 NA Intergenic Tigger7|DNA|TcMar-Tigger -44658 NM_001127330 19016 Mm.3020 NM_011146 ENSMUSG00000000440 Pparg Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2 peroxisome proliferator activated receptor gamma protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576 chr1 191223974 191224173 + 0.31137425193576 NA promoter-TSS (NR_151547) promoter-TSS (NR_151547) -381 NR_151547 100504360 Mm.16927 NM_001033188 D730003I15Rik AU020850 RIKEN cDNA D730003I15 gene ncRNA unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-14 chr16 95815125 95815430 + 0.31137425193576 NA Intergenic Intergenic 83436 NR_040485 69776 Mm.120470 NR_040484 ENSMUSG00000086899 1600002D24Rik - RIKEN cDNA 1600002D24 gene ncRNA common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-3 chr1 182504718 182504906 + 0.31137425193576 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 12798 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-7 chr11 120184738 120184956 + 0.31137425193576 NA Intergenic Intergenic 5009 NR_030682 100042332 Mm.269766 NR_030682 2810410L24Rik - RIKEN cDNA 2810410L24 gene ncRNA common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-12 chr8 126679370 126679658 + 0.31137425193576 NA Intergenic Intergenic -86078 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-2 chr13 21710129 21710332 + 0.31137425193576 NA Intergenic Intergenic 5913 NM_178199 319185 NM_178199 ENSMUSG00000094338 Hist1h2bl H2b-291a histone cluster 1, H2bl protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-4 chr10 93273162 93273351 + 0.31137425193576 NA intron (NM_001322265, intron 2 of 4) intron (NM_001322265, intron 2 of 4) 37903 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-7 chr17 65658775 65658973 + 0.31137425193576 NA intron (NM_133685, intron 6 of 6) intron (NM_133685, intron 6 of 6) -16670 NM_001146002 213272 Mm.255732 NM_153519 ENSMUSG00000050612 Txndc2 AU021712|Sptrx-1|Sptrx1|Trx4 thioredoxin domain containing 2 (spermatozoa) protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-9 chr19 53487820 53488023 + 0.31137425193576 NA Intergenic Intergenic -23125 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-3 chr11 8585841 8586070 + 0.31137425193576 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 78580 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-14 chr3 142392615 142392936 + 0.31137425193576 NA promoter-TSS (NM_022554) promoter-TSS (NM_022554) -925 NM_001190857 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-28 chrX 151801268 151801560 + 0.31137425193576 NA Intergenic Intergenic -1868 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-8 chr5 52786207 52786455 + 0.31137425193576 NA intron (NM_030185, intron 3 of 11) PB1D9|SINE|Alu 3276 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-24 chr7 74375645 74375921 + 0.31137425193576 NA intron (NM_001038643, intron 2 of 10) intron (NM_001038643, intron 2 of 10) 178997 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-21 chr7 49797068 49797273 + 0.31137425193576 NA intron (NM_133740, intron 8 of 15) intron (NM_133740, intron 8 of 15) 18812 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-14 chr5 140536191 140536397 + 0.31137425193576 NA Intergenic Intergenic 28773 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-19 chr3 84329981 84330196 + 0.31137425193576 NA Intergenic Intergenic -25313 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-6 chr16 18460350 18460584 + 0.31137425193576 NA intron (NM_001353143, intron 11 of 16) intron (NM_001353143, intron 11 of 16) -33751 NM_001111062 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-6 chr11 88548108 88548316 + 0.31137425193576 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -71039 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-12 chr6 124758938 124759173 + 0.31137425193576 NA TTS (NM_001302642) TTS (NM_001302642) -2568 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-10 chr19 57013979 57014189 + 0.31137425193576 NA Intergenic Intergenic -5509 NM_001177797 226250 Mm.226284 NM_146102 ENSMUSG00000025083 Afap1l2 AU041783|C86904|mKIAA1914 actin filament associated protein 1-like 2 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-13 chr15 85668376 85668589 + 0.31137425193576 NA Intergenic Intergenic -35291 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-3 chr14 20158655 20158987 + 0.31137425193576 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 22961 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-4 chr10 126980748 126981064 + 0.31137425193576 NA intron (NM_001113470, intron 1 of 7) intron (NM_001113470, intron 1 of 7) 2189 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-23 chr9 108684604 108684912 + 0.31137425193576 NA TTS (NM_020520) TTS (NM_020520) -7385 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-3 chr10 80138844 80139089 + 0.31137425193576 NA intron (NR_036582, intron 1 of 10) CpG 401 NR_036582 100503659 Mm.485395 NM_015761 ENSMUSG00000035640 Cbarp 9630008F14|Dos|R29144/1 calcium channel, voltage-dependent, beta subunit associated regulatory protein protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-9 chr18 39701498 39701822 + 0.31137425193576 NA Intergenic PB1D10|SINE|Alu -71837 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-15 chr3 144568478 144568706 + 0.31137425193576 NA intron (NM_001355234, intron 1 of 6) intron (NM_001355234, intron 1 of 6) 1624 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 2OST|AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-25 chr7 80026208 80026419 + 0.31137425193576 NA promoter-TSS (NM_175433) promoter-TSS (NM_175433) 85 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-17 chr9 98313051 98313271 + 0.31137425193576 NA intron (NM_001357445, intron 1 of 3) intron (NM_001357445, intron 1 of 3) 16591 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-11 chr8 68190261 68190495 + 0.31137425193576 NA Intergenic Intergenic -86150 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-4 chr14 57749751 57750032 + 0.31137425193576 NA Intergenic PB1D10|SINE|Alu -3768 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-8 chr17 87613623 87613810 + 0.31137425193576 NA Intergenic Intergenic -22263 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-20 chr3 107827685 107828044 + 0.31137425193576 NA Intergenic Intergenic -49366 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-10 chr2 91237182 91237387 + 0.31137425193576 NA promoter-TSS (NM_028119) promoter-TSS (NM_028119) 138 NR_015464 606735 Mm.246808 NR_015464 ENSMUSG00000097868 A330069E16Rik - RIKEN cDNA A330069E16 gene ncRNA common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-7 chr5 32746781 32747005 + 0.31137425193576 NA promoter-TSS (NM_001347332) promoter-TSS (NM_001347332) -551 NM_001347332 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576 chr1 155233863 155234105 + 0.31137425193576 NA Intergenic Intergenic 75281 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-12 chr3 38116132 38116417 + 0.31137425193576 NA Intergenic Intergenic 91845 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-9 chr5 143056098 143056331 + 0.31137425193576 NA intron (NM_001359851, intron 12 of 15) intron (NM_001359851, intron 12 of 15) 56806 NM_207110 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-10 chr4 149956288 149956539 + 0.31137425193576 NA Intergenic Intergenic -1407 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-23 chr7 49133548 49133898 + 0.31137425193576 NA intron (NR_154465, intron 3 of 3) intron (NR_154465, intron 3 of 3) 28435 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-5 chr11 8635735 8636003 + 0.31137425193576 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 28666 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-3 chr10 81184645 81184848 + 0.31137425193576 NA intron (NM_001190473, intron 2 of 8) intron (NM_001190473, intron 2 of 8) 828 NM_007828 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-5 chr19 46525241 46525469 + 0.31137425193576 NA Intergenic Intergenic 23707 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-2 chr1 165237326 165237533 + 0.31137425193576 NA promoter-TSS (NM_145513) promoter-TSS (NM_145513) -469 NM_001357410 226591 Mm.21520 NM_145513 ENSMUSG00000040843 Tiprl 1810011K17Rik TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-6 chr13 67500115 67500390 + 0.31137425193576 NA intron (NM_001007575, intron 1 of 3) intron (NM_001007575, intron 1 of 3) 270 NM_001007575 238693 Mm.478914 NM_001007575 ENSMUSG00000071291 Zfp58 A530094I17Rik|Mfg-1|Mfg1|Rslcan5|Zfp817 zinc finger protein 58 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-8 chr16 24917198 24917428 + 0.31137425193576 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -142326 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-26 chr8 115703801 115703995 + 0.31137425193576 NA 3' UTR (NM_001025577, exon 1 of 1) 3' UTR (NM_001025577, exon 1 of 1) 2996 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-4 chr10 116260351 116260580 + 0.31137425193576 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -40909 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-16 chr4 137480349 137480660 + 0.31137425193576 NA intron (NM_008305, intron 1 of 96) MIR3|SINE|MIR 11701 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-15 chr18 40161416 40161644 + 0.31137425193576 NA Intergenic Intergenic 57869 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-6 chr16 96145477 96145716 + 0.31137425193576 NA intron (NM_207301, intron 1 of 4) CpG 177 NM_207301 71446 Mm.255063 NM_207301 ENSMUSG00000023147 Wrb 5530402J05Rik|C030018G21Rik|Chd5 tryptophan rich basic protein protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-11 chr7 84413004 84413255 + 0.31137425193576 NA Intergenic Intergenic -3091 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576 chr1 58661499 58661748 + 0.31137425193576 NA intron (NM_001347056, intron 10 of 13) intron (NM_001347056, intron 10 of 13) 8982 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-6 chr12 100776329 100776567 + 0.31137425193576 NA Intergenic Intergenic -2609 NM_001361023 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-2 chr10 17795529 17795862 + 0.31137425193576 NA promoter-TSS (NM_138628) promoter-TSS (NM_138628) -524 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-8 chr12 84844385 84844600 + 0.31137425193576 NA intron (NM_013589, intron 3 of 34) intron (NM_013589, intron 3 of 34) -31310 NR_028577 100303738 Mm.479389 NR_028577 ENSMUSG00000092130 D030025P21Rik - RIKEN cDNA D030025P21 gene ncRNA unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-5 chr15 59543448 59543725 + 0.31137425193576 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -105068 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576 chr10 97393694 97393945 + 0.31137425193576 NA Intergenic Intergenic -29659 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-9 chr12 87444502 87444770 + 0.31137425193576 NA promoter-TSS (NM_001013372) promoter-TSS (NM_001013372) -619 NM_001013372 654309 Mm.442579 NM_001013372 ENSMUSG00000079036 Nrp - neural regeneration protein protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-13 chr3 121967254 121967459 + 0.31137425193576 NA promoter-TSS (NM_001356524) promoter-TSS (NM_001356524) -450 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-3 chr11 101171768 101171981 + 0.31137425193576 NA promoter-TSS (NM_001346769) promoter-TSS (NM_001346769) -502 NM_001346769 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-14 chr9 62838857 62839058 + 0.31137425193576 NA intron (NM_001033175, intron 1 of 6) CpG 170 NM_001033175 76524 Mm.283636 NM_001033175 ENSMUSG00000032245 Cln6 1810065L06Rik|AW743417|D9Bwg1455e|nclf ceroid-lipofuscinosis, neuronal 6 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-13 chr4 40723537 40723797 + 0.31137425193576 NA promoter-TSS (NR_077226) promoter-TSS (NR_077226) 737 NM_001164672 15502 Mm.27897 NM_008298 ENSMUSG00000028410 Dnaja1 HSJ-2|Hsj2|Nedd7 DnaJ heat shock protein family (Hsp40) member A1 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-14 chr7 66571966 66572171 + 0.31137425193576 NA Intergenic Intergenic 117493 NM_080443 117589 Mm.34785 NM_080443 ENSMUSG00000030509 Asb7 AI449039|Asb-7|D030055C23Rik ankyrin repeat and SOCS box-containing 7 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-10 chr18 60716859 60717090 + 0.31137425193576 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 10592 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-6 chr15 11888976 11889227 + 0.31137425193576 NA intron (NM_001039181, intron 2 of 7) intron (NM_001039181, intron 2 of 7) 16573 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-7 chr19 5089055 5089286 + 0.31137425193576 NA intron (NM_026553, intron 1 of 7) intron (NM_026553, intron 1 of 7) 632 NM_026553 68090 Mm.44202 NM_026553 ENSMUSG00000024875 Yif1a 5330422J23Rik|54TM|Yif1|Yif1p Yip1 interacting factor homolog A (S. cerevisiae) protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-18 chr4 149977840 149978048 + 0.31137425193576 NA Intergenic Intergenic -22938 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-7 chr14 18554420 18554691 + 0.31137425193576 NA Intergenic Intergenic -222711 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-4 chr14 54432627 54432859 + 0.31137425193576 NA intron (NM_008608, intron 1 of 9) intron (NM_008608, intron 1 of 9) 1145 NM_008608 17387 Mm.280175 NM_008608 ENSMUSG00000000957 Mmp14 AI325305|MMP-X1|MT-MMP-1|MT1-MMP|sabe matrix metallopeptidase 14 (membrane-inserted) protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576 chr1 91444258 91444453 + 0.31137425193576 NA intron (NM_011066, intron 6 of 22) intron (NM_011066, intron 6 of 22) 14973 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-10 chr8 35917123 35917319 + 0.31137425193576 NA Intergenic Intergenic -34264 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-9 chr4 149557487 149557738 + 0.31137425193576 NA intron (NM_023465, intron 4 of 4) intron (NM_023465, intron 4 of 4) 12495 NM_001141930 67087 Mm.299735 NM_023465 ENSMUSG00000028988 Ctnnbip1 1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat catenin beta interacting protein 1 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576 chr1 84507381 84507609 + 0.31137425193576 NA intron (NM_152915, intron 5 of 12) intron (NM_152915, intron 5 of 12) -188344 NR_039588 100628595 NR_039588 ENSMUSG00000093254 Mir5126 mir-5126|mmu-mir-5126|mu-mir-5126 microRNA 5126 ncRNA common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-11 chr6 34714502 34714719 + 0.31137425193576 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 5166 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-11 chr8 84502039 84502242 + 0.31137425193576 NA intron (NM_001252060, intron 3 of 47) intron (NM_001252060, intron 3 of 47) 86776 NM_001252061 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-18 chr2 30706516 30706705 + 0.31137425193576 NA Intergenic Intergenic -14600 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-12 chr8 106191715 106191992 + 0.31137425193576 NA intron (NM_001357381, intron 3 of 9) intron (NM_001357381, intron 3 of 9) 19080 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-19 chr6 128102990 128103237 + 0.31137425193576 NA intron (NM_175414, intron 1 of 8) intron (NM_175414, intron 1 of 8) 40465 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-27 chr9 63674974 63675260 + 0.31137425193576 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 72471 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-13 chr7 28357741 28357928 + 0.31137425193576 NA Intergenic Intergenic 6294 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-16 chr7 118481044 118481355 + 0.31137425193576 NA Intergenic MER2|DNA|TcMar-Tigger 10776 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-4 chr11 57708590 57708777 + 0.31137425193576 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) -59189 NR_153850 78762 Mm.362149 NR_153850 4933424L21Rik - RIKEN cDNA 4933424L21 gene ncRNA common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-8 chr16 45385197 45385508 + 0.31137425193576 NA intron (NM_001358443, intron 4 of 4) intron (NM_001358443, intron 4 of 4) 23701 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-10 chr5 149386316 149386522 + 0.31137425193576 NA Intergenic Intergenic -25330 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-8 chr4 137479208 137479430 + 0.31137425193576 NA intron (NM_008305, intron 1 of 96) intron (NM_008305, intron 1 of 96) 10516 NM_008305 15530 Mm.273662 NM_008305 ENSMUSG00000028763 Hspg2 AI852380|Pcn|Plc|per perlecan (heparan sulfate proteoglycan 2) protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-15 chr9 103133680 103133897 + 0.31137425193576 NA intron (NM_173781, intron 1 of 7) intron (NM_173781, intron 1 of 7) 21714 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-3 chr13 59658438 59658755 + 0.31137425193576 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 17188 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-10 chr13 28632899 28633179 + 0.31137425193576 NA intron (NR_045054, intron 5 of 7) B1_Mus2|SINE|Alu 77834 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-8 chr18 36707834 36708022 + 0.31137425193576 NA Intergenic Intergenic -12003 NM_172831 240216 Mm.252323 NM_172831 ENSMUSG00000044719 E230025N22Rik EG240216 Riken cDNA E230025N22 gene protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-2 chr1 131378764 131378952 + 0.31137425193576 NA intron (NM_001081011, intron 4 of 22) intron (NM_001081011, intron 4 of 22) -99295 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-E|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-2 chr1 180783145 180783372 + 0.31137425193576 NA Intergenic Intergenic 30347 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a EyeLinc14|H3.3A H3 histone, family 3A protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-17 chr18 56818708 56818956 + 0.31137425193576 NA intron (NM_177115, intron 1 of 4) intron (NM_177115, intron 1 of 4) 106716 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-4 chr12 8385608 8385847 + 0.31137425193576 NA Intergenic Intergenic 72294 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-7 chr15 25826180 25826389 + 0.31137425193576 NA Intergenic Intergenic -17014 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-11 chr3 7497199 7497450 + 0.31137425193576 NA Intergenic Intergenic -6102 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-7 chr17 53569659 53569884 + 0.31137425193576 NA intron (NR_151733, intron 1 of 16) intron (NR_151733, intron 1 of 16) 2800 NR_151733 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-2 chr10 17947268 17947472 + 0.31137425193576 NA intron (NM_001033432, intron 1 of 3) CpG 697 NM_001033432 380629 Mm.276430 NM_001033432 ENSMUSG00000039879 Heca Gm869|HDC|HDCL hdc homolog, cell cycle regulator protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-7 chr16 90886254 90886481 + 0.31137425193576 NA intron (NM_027627, intron 4 of 6) intron (NM_027627, intron 4 of 6) 48482 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-9 chr18 35045871 35046065 + 0.31137425193576 NA Intergenic Intergenic -72944 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-13 chr8 126831996 126832200 + 0.31137425193576 NA Intergenic Intergenic -16922 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA unique_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-20 chr6 148941364 148941781 + 0.31137425193576 NA intron (NM_001361398, intron 1 of 4) intron (NM_001361398, intron 1 of 4) 3254 NM_001355645 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding common_peak2_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-6 chr4 155176614 155176834 + 0.31137425193576 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 45811 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-12 chr15 83292886 83293107 + 0.31137425193576 NA Intergenic Intergenic -41222 NM_001004150 239559 Mm.323805 NM_001004150 ENSMUSG00000047878 A4galt - alpha 1,4-galactosyltransferase protein-coding unique_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576 chr1 171361720 171361964 + 0.31137425193576 NA Intergenic Intergenic -1044 NM_001033039 68874 Mm.10756 NM_001033039 ENSMUSG00000045259 Klhdc9 1190002J23Rik|AA087357|ESTM31 kelch domain containing 9 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-3 chr10 80387157 80387364 + 0.31137425193576 NA exon (NM_198615, exon 1 of 2) exon (NM_198615, exon 1 of 2) 391 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-16 chr18 53245769 53246063 + 0.31137425193576 NA intron (NM_029394, intron 1 of 6) CpG 254 NM_029394 69226 Mm.32414 NM_029394 ENSMUSG00000024535 Snx24 2810011K15Rik|5730433I16Rik|AI451341 sorting nexing 24 protein-coding unique_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-6 chr11 56270468 56270802 + 0.31137425193576 NA Intergenic Intergenic -229648 NM_153079 216749 Mm.213205 NM_153079 ENSMUSG00000037393 Nmur2 Nmu2r neuromedin U receptor 2 protein-coding common_peak1_11_11_-0.267031874702661_3.45144656336983_0.31137425193576-13 chr8 124232452 124232661 + 0.31137425193576 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 1162 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-11 chr3 37769734 37769969 + 0.31137425193576 NA Intergenic Intergenic -45491 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-16 chr9 37348580 37348841 + 0.31137425193576 NA promoter-TSS (NM_001081429) promoter-TSS (NM_001081429) -318 NM_001081429 245902 Mm.390150 NM_001081429 ENSMUSG00000034303 Ccdc15 A630039F14Rik|D030074L19 coiled-coil domain containing 15 protein-coding common_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-5 chr16 55813912 55814121 + 0.31137425193576 NA exon (NM_001159394, exon 11 of 12) exon (NM_001159394, exon 11 of 12) 8122 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak2_12_10_-0.0268384646089395_3.44601238633283_0.31137425193576-4 chr15 36607164 36607385 + 0.31137425193576 NA intron (NM_008774, intron 1 of 14) intron (NM_008774, intron 1 of 14) 1699 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-7 chr8 36690215 36690758 + 0.311371317671728 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 42568 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-5 chr6 116628557 116629247 + 0.311371317671728 NA promoter-TSS (NM_001302439) promoter-TSS (NM_001302439) 26 NM_001302439 67255 Mm.18810 NM_026057 ENSMUSG00000059878 Zfp422 2900028O21Rik|AU041373|KOX15|Krox-25-2|Krox-26|Krox25|Krox26|Znf22 zinc finger protein 422 protein-coding common_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-6 chr8 122145109 122145594 + 0.311371317671728 NA Intergenic Intergenic -136790 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728 chr1 181150979 181151430 + 0.311371317671728 NA intron (NM_030131, intron 1 of 4) CpG 273 NM_030131 98417 Mm.38229 NM_030131 ENSMUSG00000062169 Cnih4 AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding common_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728 chr1 82832131 82832679 + 0.311371317671728 NA Intergenic Intergenic -7055 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-2 chr10 68233942 68234601 + 0.311371317671728 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 44455 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-5 chr8 46000132 46000624 + 0.311371317671728 NA promoter-TSS (NM_001039562) promoter-TSS (NM_001039562) -528 NM_001039562 654824 Mm.334517 NM_001039562 ENSMUSG00000050914 Ankrd37 - ankyrin repeat domain 37 protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-2 chr10 77569834 77570316 + 0.311371317671728 NA Intergenic Intergenic -11580 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540|PBF pituitary tumor-transforming 1 interacting protein protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-6 chr7 84501105 84501924 + 0.311371317671728 NA Intergenic Intergenic -27440 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-5 chr7 27178047 27178876 + 0.311371317671728 NA intron (NM_029391, intron 1 of 7) intron (NM_029391, intron 1 of 7) 422 NM_029391 19342 Mm.482114 NM_029391 ENSMUSG00000053291 Rab4b 1500031G17Rik RAB4B, member RAS oncogene family protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-3 chr19 23090645 23091571 + 0.311371317671728 NA Intergenic Intergenic -50118 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-4 chr14 25526692 25527209 + 0.311371317671728 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -7489 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-3 chr13 21453093 21453761 + 0.311371317671728 NA intron (NM_001347491, intron 1 of 5) intron (NM_001347491, intron 1 of 5) 300 NM_001013786 432731 Mm.390557 NM_001013786 ENSMUSG00000022228 Zscan26 BC068174|Zfp187|Znf187 zinc finger and SCAN domain containing 26 protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-4 chr7 19226995 19227739 + 0.311371317671728 NA Intergenic Intergenic -1022 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding unique_peak1_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728 chr11 43433692 43434488 + 0.311371317671728 NA intron (NM_198936, intron 1 of 15) intron (NM_198936, intron 1 of 15) 359 NM_198936 193116 Mm.28200 NM_148673 ENSMUSG00000020409 Slu7 AU018913|D11Ertd730e|D3Bwg0878e SLU7 splicing factor homolog (S. cerevisiae) protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-8 chr9 110849500 110850197 + 0.311371317671728 NA intron (NM_183103, intron 2 of 4) intron (NM_183103, intron 2 of 4) 5342 NM_183103 74306 Mm.87419 NM_183103 ENSMUSG00000049719 Prss46 1700112C13Rik|79H19B|Tessp6 protease, serine 46 protein-coding common_peak2_51_41_0.0261657721031083_5.40540030883031_0.311371317671728 chr4 118134199 118134814 + 0.311371317671728 NA 5' UTR (NM_009176, exon 1 of 12) 5' UTR (NM_009176, exon 1 of 12) 440 NM_001285520 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728 chr1 182124838 182125229 + 0.311371317671728 NA intron (NM_012058, intron 1 of 2) CpG 296 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-2 chr5 91617580 91618349 + 0.311371317671728 NA intron (NM_145562, intron 3 of 3) intron (NM_145562, intron 3 of 3) 100264 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-6 chr7 101246081 101246718 + 0.311371317671728 NA intron (NM_199012, intron 11 of 20) intron (NM_199012, intron 11 of 20) 55689 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak2_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-3 chr4 145238728 145239295 + 0.311371317671728 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 7859 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-7 chr7 114132309 114133133 + 0.311371317671728 NA Intergenic Intergenic -14940 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-2 chr4 129188758 129189502 + 0.311371317671728 NA promoter-TSS (NM_134151) promoter-TSS (NM_134151) 412 NM_029036 74648 Mm.172064 NM_029036 ENSMUSG00000040928 S100pbp 4930429A08Rik|AI851343|S100pbpr S100P binding protein protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-8 chr9 103304765 103305581 + 0.311371317671728 NA promoter-TSS (NM_176979) promoter-TSS (NM_176979) -154 NM_176979 235559 Mm.259893 NM_176979 ENSMUSG00000032555 Topbp1 1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259 topoisomerase (DNA) II binding protein 1 protein-coding common_peak2_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-4 chr8 107048320 107048968 + 0.311371317671728 NA promoter-TSS (NM_026513) promoter-TSS (NM_026513) -30 NM_026513 68023 Mm.482335 NM_026513 ENSMUSG00000078931 Pdf 2610019N19Rik peptide deformylase (mitochondrial) protein-coding common_peak1_51_41_0.0261657721031083_5.40540030883031_0.311371317671728-4 chr19 43512344 43512877 + 0.311371317671728 NA intron (NM_010324, intron 2 of 8) intron (NM_010324, intron 2 of 8) 11995 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak2_49_43_-0.0971327564849886_5.4108652403948_0.311371317671728-3 chr6 145768963 145769560 + 0.311371317671728 NA Intergenic Intergenic -39122 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak1_113_96_-0.0569687649877713_6.57142845969324_0.311370774727824 chr18 42511529 42512567 + 0.311370774727824 NA intron (NM_001360881, intron 1 of 20) CpG 561 NR_110344 56070 Mm.270511 NM_001039474 ENSMUSG00000024498 Tcerg1 2410022J09Rik|2900090C16Rik|AI428505|CA150b|FBP23|FBP28|Taf2s|ca150|p144 transcription elongation regulator 1 (CA150) protein-coding common_peak1_116_93_0.0255655476591405_6.56737162550721_0.311370774727799 chr1 55131278 55131931 + 0.311370774727799 NA intron (NM_001310585, intron 1 of 6) CpG 359 NM_025283 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding common_peak1_117_93_0.0377572540717974_6.57346747871354_0.311370774727799 chr13 93303593 93304870 + 0.311370774727799 NA 5' UTR (NM_001284189, exon 1 of 9) 5' UTR (NM_001284189, exon 1 of 9) 474 NM_011982 26556 Mm.37533 NM_011982 ENSMUSG00000007617 Homer1 PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1 homer scaffolding protein 1 protein-coding common_peak2_116_93_0.0255655476591405_6.56737162550721_0.311370774727799 chr12 33179910 33181260 + 0.311370774727799 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 32899 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_117_93_0.0377572540717974_6.57346747871354_0.311370774727799-2 chr3 94886444 94887396 + 0.311370774727799 NA promoter-TSS (NM_008945) promoter-TSS (NM_008945) 38 NM_008945 19172 Mm.368 NM_008945 ENSMUSG00000005779 Psmb4 Pros-27 proteasome (prosome, macropain) subunit, beta type 4 protein-coding common_peak1_118_94_0.0345793190063901_6.58714526783414_0.311262485365833 chr10 79854636 79855629 + 0.311262485365833 NA promoter-TSS (NR_029447) promoter-TSS (NR_029447) -161 NR_029447 414101 Mm.401339 NR_029447 ENSMUSG00000091994 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA common_peak2_118_94_0.0345793190063901_6.58714526783414_0.311262485365833 chr7 28959703 28961360 + 0.311262485365833 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 1801 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_114_97_-0.0592546231383198_6.58508253254605_0.311262485365808 chr3 122983298 122984444 + 0.311262485365808 NA intron (NM_133857, intron 1 of 15) intron (NM_133857, intron 1 of 15) 576 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak2_114_97_-0.0592546231383198_6.58508253254605_0.311262485365808 chr13 93303511 93304753 + 0.311262485365808 NA 5' UTR (NM_001284189, exon 1 of 9) 5' UTR (NM_001284189, exon 1 of 9) 375 NM_011982 26556 Mm.37533 NM_011982 ENSMUSG00000007617 Homer1 PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1 homer scaffolding protein 1 protein-coding common_peak1_324_269_-0.0331285638076952_8.06025131514699_0.311215287686131 chr10 96619837 96623827 + 0.311215287686131 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 4831 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_119_95_0.031460085331485_6.6006925433869_0.311156440617038 chr5 148551535 148552651 + 0.311156440617038 NA promoter-TSS (NM_001359201) promoter-TSS (NM_001359201) -208 NM_001359200 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak1_115_98_-0.0614985782755877_6.59860733094182_0.311156440617013 chr15 5143918 5144694 + 0.311156440617013 NA intron (NM_001013367, intron 1 of 8) intron (NM_001013367, intron 1 of 8) 445 NM_001355640 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak2_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-3 chr11 117349207 117350023 + 0.311130777923626 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 17302 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_53_42_0.0462820961980617_5.44940580280113_0.311130777923626 chr11 51922246 51922673 + 0.311130777923626 NA Intergenic Intergenic -45172 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-8 chr8 75092780 75093325 + 0.311130777923626 NA promoter-TSS (NM_010442) promoter-TSS (NM_010442) -566 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626 chr1 52500492 52501315 + 0.311130777923626 NA promoter-TSS (NM_008667) promoter-TSS (NM_008667) -455 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak2_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-4 chr7 109608051 109608929 + 0.311130777923626 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 8078 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-3 chr19 5988846 5989246 + 0.311130777923626 NA 3' UTR (NM_007600, exon 22 of 22) 3' UTR (NM_007600, exon 22 of 22) -2903 NM_198650 381203 Mm.329638 NM_198650 ENSMUSG00000037451 Slc22a20 Gm963|OAT1-L|mOAT6 solute carrier family 22 (organic anion transporter), member 20 protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-7 chr5 117362990 117363354 + 0.311130777923626 NA intron (NM_021539, intron 1 of 8) intron (NM_021539, intron 1 of 8) 5867 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-2 chr13 56703571 56704240 + 0.311130777923626 NA intron (NM_001164042, intron 1 of 6) CpG 237 NM_001164042 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-6 chr4 147132091 147132642 + 0.311130777923626 NA Intergenic Intergenic -43500 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152 zinc finger protein 982 protein-coding common_peak1_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-3 chr3 37917418 37918324 + 0.311130777923626 NA intron (NR_040559, intron 1 of 3) intron (NR_040559, intron 1 of 3) 19058 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak2_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-2 chr14 121250206 121251088 + 0.311130777923626 NA non-coding (NR_155502, exon 1 of 1) non-coding (NR_155502, exon 1 of 1) 1941 NR_155502 320268 Mm.435974 NR_155502 B930095G15Rik - RIKEN cDNA B930095G15 gene ncRNA common_peak2_52_42_0.0195053005677623_5.43601740498598_0.311130777923626-2 chr4 125122120 125122669 + 0.311130777923626 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 5487 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_50_44_-0.101186636765768_5.44125977794679_0.311130777923626 chr10 33950779 33951460 + 0.311130777923626 NA intron (NM_001359455, intron 1 of 10) CpG 140 NM_001359456 72580 Mm.248081 NM_028287 ENSMUSG00000039531 Zufsp 2700019D07Rik zinc finger with UFM1-specific peptidase domain protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-5 chr4 80911072 80911937 + 0.311130777923626 NA exon (NM_026821, exon 1 of 2) exon (NM_026821, exon 1 of 2) 818 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 Lurap1l 1110029A09Rik|AV077978|AV175137|D4Bwg0951e|WI-13707|bM350F23.1 leucine rich adaptor protein 1-like protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-4 chr2 106973926 106974708 + 0.311130777923626 NA promoter-TSS (NM_001025102) promoter-TSS (NM_001025102) 80 NM_001025102 212772 Mm.381231 NM_173750 ENSMUSG00000027122 Arl14ep 2700007P21Rik|4930448O08Rik|ARF7EP ADP-ribosylation factor-like 14 effector protein protein-coding common_peak2_52_42_0.0195053005677623_5.43601740498598_0.311130777923626 chr4 43558858 43559371 + 0.311130777923626 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 3469 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-3 chr15 85036260 85036776 + 0.311130777923626 NA promoter-TSS (NM_133750) promoter-TSS (NM_133750) -544 NM_001356617 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak1_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-2 chr11 97450184 97450696 + 0.311130777923626 NA intron (NM_021493, intron 1 of 18) intron (NM_021493, intron 1 of 18) 280 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_53_42_0.0462820961980617_5.44940580280113_0.311130777923626 chr11 48980320 48980914 + 0.311130777923626 NA Intergenic Intergenic -1219 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_52_42_0.0195053005677623_5.43601740498598_0.311130777923626 chr17 27042684 27043502 + 0.311130777923626 NA Intergenic Intergenic 13834 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-5 chr7 104219018 104219784 + 0.311130777923626 NA intron (NM_001013616, intron 1 of 7) intron (NM_001013616, intron 1 of 7) 606 NM_001013616 94088 Mm.274843 NM_001013616 ENSMUSG00000072244 Trim6 C430046K18Rik|D7Ertd684e tripartite motif-containing 6 protein-coding common_peak2_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-2 chr10 40349367 40349911 + 0.311130777923626 NA exon (NM_001168304, exon 1 of 13) exon (NM_001168304, exon 1 of 13) 331 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_50_44_-0.101186636765768_5.44125977794679_0.311130777923626-4 chr17 26676429 26676983 + 0.311130777923626 NA intron (NM_025272, intron 1 of 3) CpG 310 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_52_42_0.0195053005677623_5.43601740498598_0.311130777923626-2 chr2 131352383 131352935 + 0.311130777923626 NA intron (NM_178607, intron 1 of 5) CpG 233 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak2_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-5 chr8 113804633 113805606 + 0.311130777923626 NA intron (NM_172466, intron 3 of 22) intron (NM_172466, intron 3 of 22) 43720 NM_172466 208936 Mm.167471 NM_172466 ENSMUSG00000053399 Adamts18 9630038L21|ADAMTS21|E130314N14Rik a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 protein-coding common_peak1_53_42_0.0462820961980617_5.44940580280113_0.311130777923626-4 chr8 24398487 24399104 + 0.311130777923626 NA Intergenic Intergenic 40151 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_120_96_0.0283979187891967_6.61411180158173_0.311052571405301 chr2 164433197 164434484 + 0.311052571405301 NA intron (NM_011521, intron 1 of 4) PB1D9|SINE|Alu 9348 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_120_96_0.0283979187891967_6.61411180158173_0.311052571405301-2 chr3 151350699 151351677 + 0.311052571405301 NA Intergenic Intergenic -86694 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_116_99_-0.0637017904379462_6.61200529455575_0.311052571405276-2 chr12 83632224 83633198 + 0.311052571405276 NA intron (NM_027349, intron 1 of 18) CpG 477 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak2_116_99_-0.0637017904379462_6.61200529455575_0.311052571405276 chr1 192854544 192855831 + 0.311052571405276 NA intron (NR_131748, intron 1 of 1) CpG 259 NR_131748 100503471 Mm.380305 NR_131748 Gm15867 - predicted gene 15867 ncRNA common_peak1_116_99_-0.0637017904379462_6.61200529455575_0.311052571405276 chr18 80553669 80554796 + 0.311052571405276 NA Intergenic Intergenic -9686 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_216_173_0.0221101137049402_7.4539985527012_0.310956942782269 chr1 131238181 131240902 + 0.310956942782269 NA intron (NM_018750, intron 1 of 5) intron (NM_018750, intron 1 of 5) 5637 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_211_177_-0.0440733348430262_7.45369676354488_0.310956942782269 chr4 148625981 148627040 + 0.310956942782269 NA intron (NM_001003898, intron 1 of 6) CpG 486 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding common_peak1_121_97_0.0253912456144239_6.62740546692242_0.310950811460187 chr1 72711284 72712420 + 0.310950811460187 NA intron (NM_009084, intron 2 of 3) intron (NM_009084, intron 2 of 3) 592 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak1_118_100_-0.0537765554144567_6.63132320504457_0.310950811460187 chr12 76545669 76547343 + 0.310950811460187 NA TTS (NR_046044) TTS (NR_046044) 1419 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA common_peak2_121_97_0.0253912456144239_6.62740546692242_0.310950811460187 chr15 102518398 102519237 + 0.310950811460187 NA intron (NM_001253795, intron 1 of 6) intron (NM_001253795, intron 1 of 6) 625 NM_009319 21357 Mm.291485 NM_009319 ENSMUSG00000023051 Tarbp2 Prbp|TRBP TARBP2, RISC loading complex RNA binding subunit protein-coding common_peak1_118_100_-0.0537765554144567_6.63132320504457_0.310950811460187-2 chr2 26639775 26641021 + 0.310950811460187 NA promoter-TSS (NR_024068) promoter-TSS (NR_024068) -154 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak2_118_100_-0.0537765554144567_6.63132320504457_0.310950811460187 chr17 87446193 87447482 + 0.310950811460187 NA promoter-TSS (NM_007589) promoter-TSS (NM_007589) 98 NM_001355703 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017|Cam2|CamC calmodulin 2 protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-10 chr8 107502506 107503170 + 0.310901174692144 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -48406 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA common_peak1_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-3 chr4 58413923 58415085 + 0.310901174692144 NA Intergenic Lx8|LINE|L1 26594 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA common_peak2_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-5 chr6 88519048 88519578 + 0.310901174692144 NA promoter-TSS (NM_016906) promoter-TSS (NM_016906) -513 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144 chr10 71119963 71120599 + 0.310901174692144 NA intron (NM_031397, intron 1 of 20) intron (NM_031397, intron 1 of 20) 39409 NM_031397 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding common_peak2_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-4 chr6 84179271 84179917 + 0.310901174692144 NA intron (NM_001077694, intron 40 of 54) intron (NM_001077694, intron 40 of 54) 160208 NM_021469 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak2_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-3 chr5 31220818 31221458 + 0.310901174692144 NA promoter-TSS (NM_008014) promoter-TSS (NM_008014) -593 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak2_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-3 chr4 132421798 132422395 + 0.310901174692144 NA intron (NM_001161797, intron 1 of 12) CpG 350 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-5 chr2 164486579 164487054 + 0.310901174692144 NA promoter-TSS (NM_001048228) promoter-TSS (NM_001048228) -61 NM_001048228 52840 Mm.256927 NM_026797 ENSMUSG00000017734 Dbndd2 1110017A21Rik|2900022J10Rik|AU041050|AW048677|D2Bwg0891e|Nkip|R74724 dysbindin (dystrobrevin binding protein 1) domain containing 2 protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-8 chr6 134998395 134998902 + 0.310901174692144 NA Intergenic Intergenic -12964 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak1_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-5 chr7 126928991 126929524 + 0.310901174692144 NA exon (NM_172747, exon 1 of 6) exon (NM_172747, exon 1 of 6) 378 NM_172747 233877 Mm.245897 NM_172747 ENSMUSG00000030685 Kctd13 1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1 potassium channel tetramerisation domain containing 13 protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-2 chr11 59383723 59384368 + 0.310901174692144 NA Intergenic Intergenic -8392 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-2 chr19 38039399 38040258 + 0.310901174692144 NA intron (NM_001302140, intron 1 of 53) ID_B1|SINE|B4 3749 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak1_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-4 chr4 109665605 109666517 + 0.310901174692144 NA promoter-TSS (NM_007671) promoter-TSS (NM_007671) -689 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-4 chr9 41660341 41661314 + 0.310901174692144 NA Intergenic Intergenic 78901 NR_029822 387236 NR_029822 ENSMUSG00000093354 Mir125b-1 Mirn125b|Mirn125b-1|mir-125b-1 microRNA 125b-1 ncRNA common_peak2_51_45_-0.105078761175144_5.47102257546944_0.310901174692144 chr11 54438280 54438687 + 0.310901174692144 NA intron (NM_173753, intron 1 of 17) CpG 304 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-3 chr16 30964912 30965543 + 0.310901174692144 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 116205 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-6 chr4 32570721 32571490 + 0.310901174692144 NA intron (NR_026843, intron 1 of 4) intron (NR_026843, intron 1 of 4) 557 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA common_peak2_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-2 chr11 106066122 106066655 + 0.310901174692144 NA exon (NM_027346, exon 1 of 5) exon (NM_027346, exon 1 of 5) 281 NM_027346 70207 Mm.343857 NM_027346 ENSMUSG00000001983 Taco1 2310066I18Rik|Ccdc44 translational activator of mitochondrially encoded cytochrome c oxidase I protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-9 chr8 3606019 3606675 + 0.310901174692144 NA exon (NM_001163749, exon 12 of 17) exon (NM_001163749, exon 12 of 17) 14949 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak1_51_45_-0.105078761175144_5.47102257546944_0.310901174692144-2 chr2 164432060 164432443 + 0.310901174692144 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 10937 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_51_45_-0.105078761175144_5.47102257546944_0.310901174692144 chr12 75596465 75596967 + 0.310901174692144 NA promoter-TSS (NM_012024) promoter-TSS (NM_012024) -516 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-4 chr17 33955864 33956364 + 0.310901174692144 NA promoter-TSS (NM_011296) promoter-TSS (NM_011296) 24 NM_001357329 224705 Mm.448614 NM_172620 ENSMUSG00000024319 Vps52 ARE1|D130068D18|D430041K17Rik|SAC2|Sacm2l|tclw5 VPS52 GARP complex subunit protein-coding common_peak2_54_43_0.0394006827136417_5.47913195999412_0.310901174692144 chr10 5823490 5824257 + 0.310901174692144 NA promoter-TSS (NM_175374) promoter-TSS (NM_175374) 70 NM_175374 108853 Mm.55082 NM_175374 ENSMUSG00000019774 Mtrf1l 9130004K12Rik mitochondrial translational release factor 1-like protein-coding common_peak1_54_43_0.0394006827136417_5.47913195999412_0.310901174692144-7 chr5 104047093 104047859 + 0.310901174692144 NA promoter-TSS (NR_049192) promoter-TSS (NR_049192) -527 NR_049192 100885831 NR_049192 ENSMUSG00000093690 Mir5619 Gm23866|mir-5619|mmu-mir-5619 microRNA 5619 ncRNA common_peak1_213_178_-0.038704719808341_7.46446341736009_0.310900537238683 chr18 46597772 46599270 + 0.310900537238683 NA promoter-TSS (NM_025698) promoter-TSS (NM_025698) 817 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding common_peak2_123_98_0.0340379398999282_6.64637559002957_0.310851097176027 chr8 74993634 74994418 + 0.310851097176027 NA intron (NM_178017, intron 1 of 10) CpG 376 NM_178017 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding common_peak2_123_98_0.0340379398999282_6.64637559002957_0.310851097176027-2 chr8 121082401 121083678 + 0.310851097176027 NA promoter-TSS (NR_130109) promoter-TSS (NR_130109) 71 NR_045471 68790 Mm.246916 NR_045471 ENSMUSG00000097336 Fendrr 1110050K14Rik|LL66|linc-Foxf1a|lincFoxf1 Foxf1 adjacent non-coding developmental regulatory RNA ncRNA common_peak2_122_98_0.0224385497482835_6.64057589495375_0.310851097176027 chr4 122886135 122886987 + 0.310851097176027 NA promoter-TSS (NM_001358036) promoter-TSS (NM_001358036) -485 NM_001358036 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_344_275_0.0207113868529323_8.11888015020464_0.310811535232034 chr8 11311318 11314576 + 0.310811535232034 NA promoter-TSS (NR_133670) promoter-TSS (NR_133670) -121 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_215_180_-0.0414089953295349_7.47914138941844_0.310789627583227 chr19 29250541 29252685 + 0.310789627583227 NA promoter-TSS (NM_008413) promoter-TSS (NM_008413) -190 NM_001048177 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak2_124_99_0.0310445915582189_6.65937848555383_0.310753367478978 chr1 157411491 157412615 + 0.310753367478978 NA promoter-TSS (NR_027984) promoter-TSS (NR_027984) -299 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak2_124_99_0.0310445915582189_6.65937848555383_0.310753367478978-2 chr8 3676498 3677374 + 0.310753367478978 NA intron (NM_025701, intron 1 of 1) intron (NM_025701, intron 1 of 1) 459 NM_025701 66682 Mm.29090 NM_025701 ENSMUSG00000040236 Trappc5 4021401A16Rik|TRS31 trafficking protein particle complex 5 protein-coding common_peak1_124_99_0.0310445915582189_6.65937848555383_0.310753367478978 chr8 69901171 69902456 + 0.310753367478978 NA promoter-TSS (NM_032004) promoter-TSS (NM_032004) -371 NM_032004 83984 Mm.432504 NM_032004 ENSMUSG00000047654 Tssk6 Sstk|TSK-6|TSSK-6 testis-specific serine kinase 6 protein-coding common_peak1_217_181_-0.0361547346434952_7.48971727287695_0.310735102224395-2 chr3 51276430 51278080 + 0.310735102224395 NA exon (NM_001291063, exon 1 of 7) exon (NM_001291063, exon 1 of 7) 259 NM_001291063 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_217_181_-0.0361547346434952_7.48971727287695_0.310735102224395 chr15 59599116 59600586 + 0.310735102224395 NA intron (NM_026746, intron 6 of 6) intron (NM_026746, intron 6 of 6) -48803 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-5 chr18 16739780 16740466 + 0.310681778627721 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 69123 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-7 chr9 43944535 43945307 + 0.310681778627721 NA Intergenic Intergenic -98463 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak2_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-4 chr6 97148296 97148902 + 0.310681778627721 NA intron (NM_175313, intron 1 of 17) CpG 284 NM_175313 101351 Mm.116802 NM_175313 ENSMUSG00000035245 Eogt A130022J15Rik|AI447490|AW214473|AW259391|Aer61 EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721 chr12 29933555 29934460 + 0.310681778627721 NA Intergenic Intergenic -4029 NM_181395 69675 Mm.251774 NM_181395 ENSMUSG00000020674 Pxdn 2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230 peroxidasin protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-4 chr5 122391979 122392554 + 0.310681778627721 NA intron (NM_019824, intron 1 of 6) (T)n|Simple_repeat|Simple_repeat 388 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak2_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-5 chr4 129232328 129233233 + 0.310681778627721 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) -4869 NM_001285866 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-6 chr5 129886725 129887272 + 0.310681778627721 NA intron (NM_024166, intron 1 of 3) intron (NM_024166, intron 1 of 3) 472 NM_024166 14004 Mm.30133 NM_024166 ENSMUSG00000070493 Chchd2 AL033347|Etohi6 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-7 chr8 115903362 115904067 + 0.310681778627721 NA Intergenic Intergenic -196820 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721 chr11 51921937 51922571 + 0.310681778627721 NA Intergenic Intergenic -45377 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-6 chr8 60773896 60774416 + 0.310681778627721 NA Intergenic Intergenic -116237 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak2_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-6 chr9 75625393 75625997 + 0.310681778627721 NA promoter-TSS (NM_027309) promoter-TSS (NM_027309) -37 NM_027309 70082 Mm.19119 NM_027309 ENSMUSG00000032184 Lysmd2 2210402C18Rik|AV033872|AW538442 LysM, putative peptidoglycan-binding, domain containing 2 protein-coding common_peak1_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-3 chr5 77359968 77360997 + 0.310681778627721 NA intron (NM_008048, intron 1 of 4) ID4_|SINE|ID 47563 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721 chr14 33446503 33447074 + 0.310681778627721 NA intron (NM_001310453, intron 1 of 11) CpG 370 NM_001310453 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_55_44_0.0327910178890054_5.50824860527418_0.310681778627721 chr13 68581495 68582002 + 0.310681778627721 NA promoter-TSS (NR_138477) promoter-TSS (NR_138477) 356 NM_001308475 210009 Mm.205514 NM_172480 ENSMUSG00000034617 Mtrr 4732420G08|MSR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-7 chr8 84269283 84270357 + 0.310681778627721 NA intron (NM_026350, intron 1 of 9) B3A|SINE|B2 582 NM_001294281 67736 Mm.30095 NM_026350 ENSMUSG00000004994 Ccdc130 4930527D15Rik|C77430 coiled-coil domain containing 130 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-3 chr16 14361684 14362135 + 0.310681778627721 NA intron (NM_008576, intron 1 of 30) intron (NM_008576, intron 1 of 30) 351 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak2_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-5 chr8 111258983 111259456 + 0.310681778627721 NA promoter-TSS (NM_009149) promoter-TSS (NM_009149) -17 NM_009149 20340 Mm.276271 NM_009149 ENSMUSG00000003316 Glg1 AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel golgi apparatus protein 1 protein-coding common_peak1_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-4 chr9 64281664 64282020 + 0.310681778627721 NA intron (NM_001324558, intron 1 of 7) CpG 257 NM_001324557 66131 Mm.196219 NM_025372 ENSMUSG00000032397 Tipin 1110005A05Rik|1110018P21Rik timeless interacting protein protein-coding common_peak1_53_46_-0.082042000777478_5.5135678512889_0.310681778627721 chr17 24894357 24894995 + 0.310681778627721 NA promoter-TSS (NM_023260) promoter-TSS (NM_023260) 411 NM_001163102 193838 Mm.440199 NM_001163102 ENSMUSG00000073436 Eme2 2810013J18Rik essential meiotic structure-specific endonuclease subunit 2 protein-coding common_peak2_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-4 chr3 121576587 121577642 + 0.310681778627721 NA Intergenic Intergenic -44770 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-4 chr18 36521529 36522091 + 0.310681778627721 NA Intergenic Intergenic -6005 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-5 chr5 138441469 138441873 + 0.310681778627721 NA intron (NM_028130, intron 1 of 4) CpG 195 NM_028130 72154 Mm.20263 NM_028130 ENSMUSG00000036898 Zfp157 2610020C11Rik|A630094N24Rik|AI327407|Roma|mszf12|mszf23-1 zinc finger protein 157 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-2 chr15 98992902 98993636 + 0.310681778627721 NA Intergenic CpG 7304 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak2_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-2 chr15 103221061 103221537 + 0.310681778627721 NA intron (NM_001358950, intron 1 of 4) intron (NM_001358950, intron 1 of 4) -5947 NM_001110216 12419 Mm.262059 NM_007626 ENSMUSG00000009575 Cbx5 2610029O15Rik|C75991|HP1|Hp1a|Hp1alpha chromobox 5 protein-coding common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-4 chr17 14942875 14943672 + 0.310681778627721 NA promoter-TSS (NM_001083880) promoter-TSS (NM_001083880) 89 NM_026451 67912 Mm.390949 NM_026451 ENSMUSG00000050088 1600012H06Rik - RIKEN cDNA 1600012H06 gene protein-coding common_peak2_52_46_-0.108818796407777_5.50017945347375_0.310681778627721 chr13 108402183 108403052 + 0.310681778627721 NA Intergenic Intergenic 86280 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-3 chr2 25557929 25558638 + 0.310681778627721 NA intron (NM_021519, intron 1 of 4) intron (NM_021519, intron 1 of 4) 383 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak1_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-2 chr4 107879825 107880249 + 0.310681778627721 NA intron (NM_001282737, intron 1 of 4) CpG 282 NM_001282737 17149 Mm.808 NM_001282737 ENSMUSG00000028609 Magoh Mago-m|Mos2 mago homolog, exon junction complex core component protein-coding common_peak2_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-2 chr15 85555801 85556518 + 0.310681778627721 NA intron (NM_009528, intron 2 of 3) intron (NM_009528, intron 2 of 3) 21911 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-3 chr15 76925054 76925723 + 0.310681778627721 NA promoter-TSS (NM_172817) promoter-TSS (NM_172817) 60 NM_172817 239546 Mm.183650 NM_172817 ENSMUSG00000054967 Zfp647 6030449J21|Es492|Znf250 zinc finger protein 647 protein-coding common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-2 chr12 54620724 54621433 + 0.310681778627721 NA Intergenic Intergenic 24934 NR_035439 100316682 NR_035439 ENSMUSG00000106344 Mir1892 Mirn1892|mir-1892|mmu-mir-1892 microRNA 1892 ncRNA common_peak2_53_46_-0.082042000777478_5.5135678512889_0.310681778627721-6 chr4 100095851 100096602 + 0.310681778627721 NA exon (NM_001312690, exon 1 of 4) exon (NM_001312690, exon 1 of 4) 435 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-3 chr18 35836174 35836764 + 0.310681778627721 NA intron (NM_001357458, intron 1 of 2) intron (NM_001357458, intron 1 of 2) 6155 NM_001357458 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-3 chr2 167932466 167933008 + 0.310681778627721 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 410 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_55_44_0.0327910178890054_5.50824860527418_0.310681778627721-5 chr4 135963222 135963582 + 0.310681778627721 NA promoter-TSS (NM_001356493) promoter-TSS (NM_001356493) -323 NM_001356493 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding common_peak1_52_46_-0.108818796407777_5.50017945347375_0.310681778627721-2 chr16 16599823 16600291 + 0.310681778627721 NA promoter-TSS (NM_001301817) promoter-TSS (NM_001301817) -79 NM_001301817 224014 Mm.256131 NM_139232 ENSMUSG00000022788 Fgd4 9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding common_peak2_343_284_-0.0297405175624057_8.1399478502709_0.31067253986982 chr1 132334001 132336610 + 0.31067253986982 NA Intergenic Intergenic 19180 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_121_103_-0.0603386284114595_6.67027040393536_0.310657563702689-2 chr13 70652712 70654412 + 0.310657563702689 NA Intergenic Intergenic -15928 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_125_100_0.0281038359217964_6.67226340071269_0.310657563702689 chr8 34154030 34155142 + 0.310657563702689 NA promoter-TSS (NM_026432) promoter-TSS (NM_026432) 23 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak2_121_103_-0.0603386284114595_6.67027040393536_0.310657563702689 chr11 4263673 4264877 + 0.310657563702689 NA intron (NM_008501, intron 1 of 3) intron (NM_008501, intron 1 of 3) -2521 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_224_179_0.025061990704299_7.50438409168182_0.310627859088595 chr8 109919739 109921993 + 0.310627859088595 NA intron (NM_001122594, intron 10 of 18) intron (NM_001122594, intron 10 of 18) 41339 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak1_126_101_0.0252142796024204_6.6850324817727_0.310563629470523-2 chr4 130173768 130175098 + 0.310563629470523 NA intron (NM_023476, intron 1 of 11) intron (NM_023476, intron 1 of 11) 369 NM_001168333 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak1_126_101_0.0252142796024204_6.6850324817727_0.310563629470523 chr12 80364946 80366160 + 0.310563629470523 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 26124 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_123_104_-0.0508509576865848_6.68882003882283_0.310563629470473 chr11 68851904 68853088 + 0.310563629470473 NA intron (NM_023668, intron 1 of 8) CpG 635 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak1_122_104_-0.0624503478382294_6.68302034374701_0.310563629470473 chrX 74245052 74246340 + 0.310563629470473 NA intron (NM_001290421, intron 1 of 46) intron (NM_001290421, intron 1 of 46) 838 NM_010227 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-6 chr3 8986670 8987017 + 0.310474156842889 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 17361 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-8 chr18 74824368 74824574 + 0.310474156842889 NA Intergenic Intergenic 45259 NM_177470 52538 Mm.245724 NM_177470 ENSMUSG00000036880 Acaa2 0610011L04Rik|AI255831|AI265397|D18Ertd240e acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-21 chr2 117800855 117801105 + 0.310474156842889 NA Intergenic Intergenic 11822 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-5 chr13 13024841 13025065 + 0.310474156842889 NA Intergenic 5S|rRNA|rRNA -19623 NM_031191 18811 Mm.88796 NM_031191 ENSMUSG00000079092 Prl2c2 Ghd2|MRP-1|PLF-1|Plf|Plf1 prolactin family 2, subfamily c, member 2 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-10 chr2 125949054 125949292 + 0.310474156842889 NA intron (NM_175154, intron 8 of 9) intron (NM_175154, intron 8 of 9) 82950 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-9 chr4 148087723 148087959 + 0.310474156842889 NA intron (NM_001301281, intron 1 of 4) CpG 223 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-5 chr12 78226913 78227176 + 0.310474156842889 NA intron (NM_172952, intron 1 of 23) CpG 389 NM_145965 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-5 chr3 122479521 122479725 + 0.310474156842889 NA intron (NM_013867, intron 3 of 11) intron (NM_013867, intron 3 of 11) -3946 NM_001355264 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-4 chr11 19849128 19849342 + 0.310474156842889 NA Intergenic Intergenic -75207 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-7 chr14 55479033 55479264 + 0.310474156842889 NA intron (NM_001037938, intron 1 of 7) intron (NM_001037938, intron 1 of 7) 390 NM_030686 28200 Mm.27427 NM_030686 ENSMUSG00000022210 Dhrs4 AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR dehydrogenase/reductase (SDR family) member 4 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-13 chr8 82377765 82377955 + 0.310474156842889 NA intron (NM_008357, intron 2 of 7) intron (NM_008357, intron 2 of 7) 24726 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-12 chr6 54595302 54595491 + 0.310474156842889 NA 5' UTR (NM_001164361, exon 1 of 14) 5' UTR (NM_001164361, exon 1 of 14) 285 NM_001164361 231999 Mm.35416 NM_001001335 ENSMUSG00000005225 Plekha8 6330400G01|AA517676|BC052360|Fapp-2|Fapp2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-10 chr13 41571880 41572144 + 0.310474156842889 NA Intergenic Intergenic -34204 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-4 chr13 23571474 23571697 + 0.310474156842889 NA promoter-TSS (NM_178187) promoter-TSS (NM_178187) 185 NM_178196 319181 Mm.261673 NM_178196 ENSMUSG00000058385 Hist1h2bg - histone cluster 1, H2bg protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-4 chr10 80940153 80940387 + 0.310474156842889 NA Intergenic ID_B1|SINE|B4 10179 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-13 chr6 51117403 51117652 + 0.310474156842889 NA Intergenic Intergenic 152383 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-13 chr8 120620047 120620268 + 0.310474156842889 NA intron (NM_001308449, intron 2 of 3) intron (NM_001308449, intron 2 of 3) 14225 NM_197988 68918 Mm.473736 NM_197988 ENSMUSG00000043687 1190005I06Rik - RIKEN cDNA 1190005I06 gene protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-13 chr15 98607968 98608294 + 0.310474156842889 NA promoter-TSS (NM_007405) promoter-TSS (NM_007405) -498 NM_007405 11512 Mm.157091 NM_007405 ENSMUSG00000022994 Adcy6 AC6|mKIAA0422 adenylate cyclase 6 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-26 chr7 82406962 82407292 + 0.310474156842889 NA intron (NM_001190374, intron 3 of 29) intron (NM_001190374, intron 3 of 29) 71433 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-18 chr7 45126540 45126747 + 0.310474156842889 NA promoter-TSS (NR_000003) promoter-TSS (NR_000003) 25 NR_002455 27210 NR_002455 ENSMUSG00000065878 Snord34 Rnu34|U34 small nucleolar RNA, C/D box 34 snoRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-2 chr10 67712417 67712623 + 0.310474156842889 NA Intergenic Intergenic -140561 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-15 chr19 44745786 44745978 + 0.310474156842889 NA Intergenic Intergenic -11512 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-14 chr18 62691614 62691878 + 0.310474156842889 NA intron (NM_001168423, intron 1 of 4) intron (NM_001168423, intron 1 of 4) 49641 NM_001168423 100038417 Mm.387557 NM_001168423 ENSMUSG00000073551 Spink13 Gm10534|Spink5l3 serine peptidase inhibitor, Kazal type 13 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-5 chr11 80810720 80810980 + 0.310474156842889 NA intron (NM_029537, intron 1 of 6) intron (NM_029537, intron 1 of 6) 435 NM_029537 103743 Mm.27682 NM_029537 ENSMUSG00000035413 Tmem98 6530411B15Rik|AI463522 transmembrane protein 98 protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-16 chr9 65012286 65012494 + 0.310474156842889 NA intron (NM_021345, intron 1 of 10) intron (NM_021345, intron 1 of 10) 9327 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-22 chr9 20951265 20951487 + 0.310474156842889 NA intron (NM_001199432, intron 1 of 38) PB1D11|SINE|Alu 1247 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-29 chr8 13648283 13648533 + 0.310474156842889 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 29179 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889 chr1 161436272 161436503 + 0.310474156842889 NA Intergenic Intergenic 40949 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-12 chr17 24722035 24722231 + 0.310474156842889 NA TTS (NM_008503) TTS (NM_008503) 1344 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889 chr1 135899789 135900148 + 0.310474156842889 NA intron (NM_001313701, intron 2 of 13) MIR3|SINE|MIR 19239 NM_001313701 18772 Mm.4494 NM_019645 ENSMUSG00000026413 Pkp1 - plakophilin 1 protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889 chr15 64186132 64186344 + 0.310474156842889 NA intron (NM_001276461, intron 5 of 28) intron (NM_001276461, intron 5 of 28) -125790 NM_001360037 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-6 chr16 43463034 43463253 + 0.310474156842889 NA intron (NM_181058, intron 3 of 6) intron (NM_181058, intron 3 of 6) -42947 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-3 chr12 82470272 82470551 + 0.310474156842889 NA Intergenic Intergenic -146514 NM_001310478 50779 Mm.126176 NM_015812 ENSMUSG00000021219 Rgs6 - regulator of G-protein signaling 6 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-14 chr6 31149358 31149631 + 0.310474156842889 NA intron (NR_110471, intron 2 of 3) intron (NR_110471, intron 2 of 3) 68980 NR_110471 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-21 chr8 71476096 71476359 + 0.310474156842889 NA TTS (NM_001294259) TTS (NM_001294259) 7033 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-14 chr8 122177433 122177688 + 0.310474156842889 NA Intergenic Intergenic -104581 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-11 chr13 70838543 70838938 + 0.310474156842889 NA intron (NM_172053, intron 2 of 22) intron (NM_172053, intron 2 of 22) 3071 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-19 chr5 30903089 30903367 + 0.310474156842889 NA exon (NM_001294262, exon 12 of 12) exon (NM_001294262, exon 12 of 12) 4560 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-14 chr15 99250290 99250579 + 0.310474156842889 NA intron (NM_001164156, intron 1 of 13) intron (NM_001164156, intron 1 of 13) -1354 NR_045627 73600 Mm.475134 NR_045627 ENSMUSG00000100599 1700120C14Rik - RIKEN cDNA 1700120C14 gene ncRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-7 chr13 5886524 5886817 + 0.310474156842889 NA Intergenic Intergenic 25181 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-13 chr5 130264276 130264559 + 0.310474156842889 NA intron (NR_153350, intron 3 of 15) intron (NR_153350, intron 3 of 15) 7380 NM_001015876 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-2 chr1 162247103 162247468 + 0.310474156842889 NA intron (NM_001038619, intron 13 of 20) intron (NM_001038619, intron 13 of 20) 23917 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-9 chr12 17762733 17762949 + 0.310474156842889 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 72032 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-24 chr5 146703289 146703540 + 0.310474156842889 NA Intergenic Intergenic 91542 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-10 chr13 104037090 104037279 + 0.310474156842889 NA intron (NM_029447, intron 10 of 12) intron (NM_029447, intron 10 of 12) 72430 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-33 chr9 57248652 57248872 + 0.310474156842889 NA intron (NM_001014398, intron 12 of 12) intron (NM_001014398, intron 12 of 12) 12206 NM_001014398 541610 Mm.378036 NM_001014398 ENSMUSG00000070298 Trcg1 - taste receptor cell gene 1 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-9 chr3 143778559 143778822 + 0.310474156842889 NA Intergenic Intergenic -66547 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-4 chr12 75734799 75735066 + 0.310474156842889 NA exon (NM_030750, exon 1 of 3) exon (NM_030750, exon 1 of 3) 797 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-2 chr1 138329720 138330018 + 0.310474156842889 NA Intergenic Intergenic 56131 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-11 chr2 126677041 126677356 + 0.310474156842889 NA promoter-TSS (NM_001271470) promoter-TSS (NM_001271470) -861 NM_001271470 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-8 chr17 35795899 35796197 + 0.310474156842889 NA Intergenic Intergenic 23598 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-11 chr6 124917008 124917234 + 0.310474156842889 NA non-coding (NR_152158, exon 1 of 2) non-coding (NR_152158, exon 1 of 2) 258 NR_152158 442825 Mm.446713 NR_152158 ENSMUSG00000055818 A230083G16Rik - RIKEN cDNA A230083G16 gene ncRNA unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-2 chr19 38054476 38054677 + 0.310474156842889 NA promoter-TSS (NM_001360663) promoter-TSS (NM_001360663) -408 NM_028293 74107 Mm.9916 NM_028293 ENSMUSG00000024989 Cep55 1200008O12Rik|2700032M20Rik centrosomal protein 55 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-2 chr11 119228124 119228383 + 0.310474156842889 NA promoter-TSS (NM_175430) promoter-TSS (NM_175430) 246 NM_001347625 207592 Mm.205263 NM_172443 ENSMUSG00000039976 Tbc1d16 B930087K01|BC026530|Tcd1d16 TBC1 domain family, member 16 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-22 chr2 125933163 125933389 + 0.310474156842889 NA intron (NM_175154, intron 7 of 9) intron (NM_175154, intron 7 of 9) 67053 NM_001291002 69976 Mm.20216 NM_175154 ENSMUSG00000027207 Galk2 2810017M24Rik|AI327030|Gk2 galactokinase 2 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-15 chr9 49572237 49572478 + 0.310474156842889 NA intron (NM_010875, intron 1 of 15) intron (NM_010875, intron 1 of 15) 54069 NR_029465 100036537 Mm.437541 NR_029465 ENSMUSG00000079564 Gm11149 - predicted gene 11149 ncRNA unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-17 chr19 43698074 43698453 + 0.310474156842889 NA intron (NM_053103, intron 3 of 12) intron (NM_053103, intron 3 of 12) 8574 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-30 chr7 110881767 110882053 + 0.310474156842889 NA intron (NM_194464, intron 18 of 20) intron (NM_194464, intron 18 of 20) -18957 NM_053247 114332 Mm.396078 NM_053247 ENSMUSG00000030787 Lyve1 1200012G08Rik|Crsbp-1|Lyve-1|Xlkd1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-8 chr4 156109424 156109656 + 0.310474156842889 NA promoter-TSS (NM_145557) promoter-TSS (NM_145557) -458 NM_145557 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-10 chr4 43969197 43969486 + 0.310474156842889 NA intron (NM_027450, intron 3 of 4) intron (NM_027450, intron 3 of 4) 11639 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-13 chr18 24112662 24112867 + 0.310474156842889 NA exon (NM_172625, exon 3 of 5) exon (NM_172625, exon 3 of 5) 9055 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-6 chr17 7169487 7169776 + 0.310474156842889 NA promoter-TSS (NM_011299) promoter-TSS (NM_011299) -484 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-2 chr11 22858507 22858748 + 0.310474156842889 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 1108 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889 chr1 184069810 184070205 + 0.310474156842889 NA intron (NM_022019, intron 3 of 3) intron (NM_022019, intron 3 of 3) 35626 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-11 chr2 153432013 153432294 + 0.310474156842889 NA intron (NM_001001986, intron 2 of 7) intron (NM_001001986, intron 2 of 7) 12326 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-10 chr5 149078712 149078902 + 0.310474156842889 NA Intergenic B3A|SINE|B2 -25750 NM_010439 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-10 chr2 140670976 140671180 + 0.310474156842889 NA intron (NM_001172160, intron 1 of 2) intron (NM_001172160, intron 1 of 2) 398 NM_001172160 71436 Mm.426781 NM_178382 ENSMUSG00000051379 Flrt3 5530600M07Rik|C430047I10Rik|mKIAA1469 fibronectin leucine rich transmembrane protein 3 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-23 chr4 54944935 54945185 + 0.310474156842889 NA Intergenic CpG -2885 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-3 chr16 30967970 30968274 + 0.310474156842889 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 113310 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-30 chr8 76902364 76902618 + 0.310474156842889 NA promoter-TSS (NM_001083906) promoter-TSS (NM_001083906) -17 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-7 chr5 136634235 136634568 + 0.310474156842889 NA Intergenic Intergenic -58745 NM_001303019 59310 Mm.5178 NM_021611 ENSMUSG00000005474 Myl10 1700027I08Rik|Mylc2pl|PLRLC myosin, light chain 10, regulatory protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-9 chr17 45743031 45743312 + 0.310474156842889 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 8665 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-31 chr8 31975737 31976069 + 0.310474156842889 NA Intergenic Intergenic -57700 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-28 chr7 140821785 140821992 + 0.310474156842889 NA intron (NM_001001180, intron 1 of 2) intron (NM_001001180, intron 1 of 2) 290 NM_001001180 407812 Mm.359154 NM_001001180 ENSMUSG00000060314 Zfp941 - zinc finger protein 941 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-9 chr18 38193008 38193208 + 0.310474156842889 NA Intergenic Intergenic 16654 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-9 chr14 25478000 25478327 + 0.310474156842889 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 18978 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-12 chr6 145056291 145056542 + 0.310474156842889 NA intron (NM_007532, intron 1 of 10) intron (NM_007532, intron 1 of 10) -7604 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-2 chr1 93687070 93687261 + 0.310474156842889 NA intron (NM_016778, intron 2 of 4) intron (NM_016778, intron 2 of 4) 1590 NM_016778 51800 Mm.3295 NM_016778 ENSMUSG00000026278 Bok matador|mtd BCL2-related ovarian killer protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-3 chr1 184707208 184707459 + 0.310474156842889 NA Intergenic Intergenic -5164 NR_040627 74971 Mm.410816 NR_040627 ENSMUSG00000092578 4930488B22Rik - RIKEN cDNA 4930488B22 gene ncRNA common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-11 chr4 127126169 127126375 + 0.310474156842889 NA intron (NM_001099319, intron 1 of 2) intron (NM_001099319, intron 1 of 2) 229 NM_001099319 100039968 Mm.392655 NM_001099319 ENSMUSG00000070737 Tmem35b Gm12942|Zmym6nb transmembrane protein 35B protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-15 chr9 106454356 106454557 + 0.310474156842889 NA intron (NM_021567, intron 1 of 12) intron (NM_021567, intron 1 of 12) 618 NM_021567 59092 Mm.286394 NM_021567 ENSMUSG00000023495 Pcbp4 1200003L19Rik|AlphaCP-4 poly(rC) binding protein 4 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-8 chr2 180220607 180220809 + 0.310474156842889 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 5151 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-11 chr6 34744788 34745063 + 0.310474156842889 NA intron (NM_145575, intron 2 of 11) intron (NM_145575, intron 2 of 11) 35481 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-22 chr5 136243964 136244216 + 0.310474156842889 NA intron (NM_001302938, intron 1 of 8) CpG 850 NM_001302939 23921 Mm.425294 NM_018825 ENSMUSG00000005057 Sh2b2 Aps SH2B adaptor protein 2 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-24 chr4 59817992 59818258 + 0.310474156842889 NA intron (NM_172468, intron 1 of 8) intron (NM_172468, intron 1 of 8) 12475 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-9 chr2 102872110 102872317 + 0.310474156842889 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 29452 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-3 chr10 60579596 60579813 + 0.310474156842889 NA intron (NM_001252635, intron 7 of 68) intron (NM_001252635, intron 7 of 68) 116786 NM_001252635 22295 Mm.440327 NM_023370 ENSMUSG00000012819 Cdh23 4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v cadherin 23 (otocadherin) protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-15 chr8 117332081 117332358 + 0.310474156842889 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -16951 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-3 chr1 153586995 153587228 + 0.310474156842889 NA Intergenic Intergenic -37397 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-10 chr7 43475095 43475301 + 0.310474156842889 NA intron (NM_001164518, intron 7 of 7) intron (NM_001164518, intron 7 of 7) 11965 NM_001290316 75690 Mm.30200 NM_001290316 ENSMUSG00000070604 Vsig10l - V-set and immunoglobulin domain containing 10 like protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-17 chr3 27193809 27194004 + 0.310474156842889 NA intron (NM_178772, intron 1 of 4) intron (NM_178772, intron 1 of 4) 10902 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-12 chr5 38209556 38209757 + 0.310474156842889 NA intron (NR_153116, intron 2 of 5) intron (NR_153116, intron 2 of 5) 10798 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-2 chr10 14528266 14528597 + 0.310474156842889 NA intron (NM_001002268, intron 2 of 24) intron (NM_001002268, intron 2 of 24) 16605 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-8 chr4 117865428 117865767 + 0.310474156842889 NA intron (NM_001355175, intron 11 of 12) intron (NM_001355175, intron 11 of 12) 6873 NM_001034876 381546 Mm.440118 NM_001034876 ENSMUSG00000078588 Ccdc24 Gm1028 coiled-coil domain containing 24 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-10 chr5 92887463 92887762 + 0.310474156842889 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) -10381 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-23 chrX 19156936 19157339 + 0.310474156842889 NA Intergenic Intergenic -10166 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-31 chr8 76977386 76977641 + 0.310474156842889 NA intron (NM_001083906, intron 2 of 8) intron (NM_001083906, intron 2 of 8) 75005 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-8 chr13 31577694 31577883 + 0.310474156842889 NA intron (NR_029439, intron 3 of 5) intron (NR_029439, intron 3 of 5) 4725 NR_029439 71307 Mm.376184 NR_029439 ENSMUSG00000038408 1700018A04Rik 4930551G20Rik|4933439J11Rik RIKEN cDNA 1700018A04 gene ncRNA common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889 chr1 77461684 77461908 + 0.310474156842889 NA intron (NM_007936, intron 3 of 17) intron (NM_007936, intron 3 of 17) 34972 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-15 chr8 122177624 122177842 + 0.310474156842889 NA Intergenic Intergenic -104408 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-25 chr4 136186967 136187186 + 0.310474156842889 NA intron (NM_177733, intron 6 of 6) intron (NM_177733, intron 6 of 6) 6294 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-3 chr11 35953699 35953949 + 0.310474156842889 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 26265 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-9 chr2 90501924 90502128 + 0.310474156842889 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -22852 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-29 chr7 99394037 99394286 + 0.310474156842889 NA intron (NM_201352, intron 2 of 17) intron (NM_201352, intron 2 of 17) 12643 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-4 chr15 67006600 67006807 + 0.310474156842889 NA Intergenic Intergenic -37062 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-32 chr9 6402039 6402361 + 0.310474156842889 NA Intergenic Intergenic -135653 NM_027942 71829 Mm.141452 NM_027942 ENSMUSG00000047619 Ddi1 1700011N24Rik DNA-damage inducible 1 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-3 chr10 17355410 17355602 + 0.310474156842889 NA Intergenic Intergenic -259724 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-27 chr7 109612160 109612415 + 0.310474156842889 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 4281 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-20 chr2 117092852 117093172 + 0.310474156842889 NA Intergenic Intergenic -28059 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-4 chr3 40894438 40894737 + 0.310474156842889 NA intron (NM_026622, intron 1 of 12) intron (NM_026622, intron 1 of 12) 310 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-13 chr4 153974699 153974914 + 0.310474156842889 NA promoter-TSS (NM_177673) promoter-TSS (NM_177673) 275 NM_007859 13368 Mm.388918 NM_007859 ENSMUSG00000029027 Dffb 40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff DNA fragmentation factor, beta subunit protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-10 chr2 167261237 167261477 + 0.310474156842889 NA Intergenic Intergenic -20820 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-5 chr16 33967157 33967358 + 0.310474156842889 NA promoter-TSS (NM_009471) promoter-TSS (NM_009471) -219 NM_009471 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-4 chr11 40404008 40404279 + 0.310474156842889 NA Intergenic Intergenic 288539 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-4 chr10 43227749 43228011 + 0.310474156842889 NA intron (NM_027772, intron 1 of 7) intron (NM_027772, intron 1 of 7) 6394 NM_001168289 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-19 chr7 112296858 112297099 + 0.310474156842889 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) 71142 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-5 chr18 46421413 46421798 + 0.310474156842889 NA Intergenic Intergenic 44211 NR_045438 72076 Mm.82766 NM_028086 Mospd4 2010013H21Rik motile sperm domain containing 4 pseudo unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-8 chr11 70189115 70189325 + 0.310474156842889 NA Intergenic Intergenic 22597 NM_010796 17312 Mm.252405 NM_010796 ENSMUSG00000000318 Clec10a CD301a|M-ASGP-BP-1|Mgl|Mgl1 C-type lectin domain family 10, member A protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-8 chr13 49302269 49302572 + 0.310474156842889 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 6788 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-21 chr5 107597236 107597518 + 0.310474156842889 NA promoter-TSS (NM_001163461) promoter-TSS (NM_001163461) 4 NM_001359918 231571 Mm.482420 NM_144911 ENSMUSG00000033773 Rpap2 AW060207 RNA polymerase II associated protein 2 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-11 chr15 95366600 95366790 + 0.310474156842889 NA intron (NM_001356950, intron 13 of 20) intron (NM_001356950, intron 13 of 20) 161319 NM_001356951 54003 Mm.3959 NM_016743 ENSMUSG00000022454 Nell2 A330108N19Rik|R75516|mel91 NEL-like 2 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-12 chr16 95704022 95704380 + 0.310474156842889 NA intron (NM_011809, intron 1 of 9) intron (NM_011809, intron 1 of 9) 1794 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-12 chr4 129377619 129377826 + 0.310474156842889 NA intron (NM_028603, intron 1 of 4) GC_rich|Low_complexity|Low_complexity 306 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889 chr1 89067934 89068135 + 0.310474156842889 NA Intergenic Intergenic -2381 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-2 chr10 17354668 17355067 + 0.310474156842889 NA Intergenic Intergenic -259085 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-12 chr8 44977528 44977744 + 0.310474156842889 NA intron (NM_001081286, intron 1 of 25) intron (NM_001081286, intron 1 of 25) 27428 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-20 chr7 113214013 113214207 + 0.310474156842889 NA intron (NM_001357070, intron 1 of 19) intron (NM_001357070, intron 1 of 19) 6645 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-32 chr8 110820720 110820907 + 0.310474156842889 NA exon (NM_133953, exon 17 of 26) exon (NM_133953, exon 17 of 26) -14889 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-7 chr16 10286780 10287014 + 0.310474156842889 NA intron (NM_007929, intron 3 of 4) intron (NM_007929, intron 3 of 4) 27071 NM_007929 13731 Mm.246009 NM_007929 ENSMUSG00000022505 Emp2 XMP epithelial membrane protein 2 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-5 chr16 38119919 38120167 + 0.310474156842889 NA intron (NM_001347232, intron 1 of 11) intron (NM_001347232, intron 1 of 11) -30783 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889 chr1 134277403 134277643 + 0.310474156842889 NA Intergenic Intergenic -12481 NM_031189 17928 Mm.16528 NM_031189 ENSMUSG00000026459 Myog MYF4|bHLHc3|myo myogenin protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-8 chr18 64940002 64940205 + 0.310474156842889 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) 52347 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-14 chr8 69090151 69090422 + 0.310474156842889 NA intron (NM_007509, intron 1 of 13) intron (NM_007509, intron 1 of 13) -1064 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-8 chr2 35337279 35337474 + 0.310474156842889 NA promoter-TSS (NM_013515) promoter-TSS (NM_013515) -367 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-5 chr11 4404134 4404390 + 0.310474156842889 NA intron (NM_029458, intron 10 of 10) intron (NM_029458, intron 10 of 10) 36820 NM_029458 75828 Mm.159592 NM_029458 ENSMUSG00000020419 Hormad2 4930529M09Rik HORMA domain containing 2 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-6 chr12 79864606 79864862 + 0.310474156842889 NA Intergenic Intergenic 59999 NR_131075 77290 Mm.395042 NR_131073 ENSMUSG00000112765 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-6 chr5 115492353 115492560 + 0.310474156842889 NA Intergenic Intergenic -7972 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-15 chr8 48110164 48110404 + 0.310474156842889 NA intron (NM_001161515, intron 1 of 5) CpG 271 NM_001161515 320685 Mm.121549 NM_178788 ENSMUSG00000031562 Dctd 6030466N05Rik dCMP deaminase protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-13 chr7 123372056 123372263 + 0.310474156842889 NA Intergenic Intergenic -2244 NM_001316713 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-26 chr5 123136022 123136257 + 0.310474156842889 NA Intergenic Intergenic -3510 NM_175092 23912 Mm.253876 NM_175092 ENSMUSG00000029449 Rhof AI845056|AV026554|Arhf|Ifld1|Rif ras homolog family member F (in filopodia) protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-5 chr11 116437234 116437473 + 0.310474156842889 NA intron (NM_176902, intron 2 of 2) intron (NM_176902, intron 2 of 2) 3140 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-6 chr13 36027676 36027931 + 0.310474156842889 NA intron (NM_201358, intron 2 of 2) MIR|SINE|MIR 59897 NM_029628 76487 Mm.44745 NM_029628 ENSMUSG00000050423 Ppp1r3g 1600032L17Rik protein phosphatase 1, regulatory (inhibitor) subunit 3G protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-5 chr15 66968223 66968426 + 0.310474156842889 NA intron (NM_008681, intron 1 of 15) intron (NM_008681, intron 1 of 15) 1317 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-11 chr4 141423777 141424118 + 0.310474156842889 NA exon (NM_013868, exon 3 of 3) exon (NM_013868, exon 3 of 3) 3168 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-4 chr17 23585797 23586125 + 0.310474156842889 NA 5' UTR (NM_001356268, exon 1 of 6) 5' UTR (NM_001356268, exon 1 of 6) 291 NM_001356268 22654 Mm.40326 NM_011747 ENSMUSG00000062012 Zfp13 AI835008|Krox-8|Zfp-13 zinc finger protein 13 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-25 chr7 65981435 65981765 + 0.310474156842889 NA intron (NM_011048, intron 12 of 21) intron (NM_011048, intron 12 of 21) -78736 NR_152094 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-14 chr7 109561497 109561720 + 0.310474156842889 NA intron (NM_001001326, intron 2 of 19) intron (NM_001001326, intron 2 of 19) 41476 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-7 chr18 60916283 60916507 + 0.310474156842889 NA exon (NM_001038499, exon 2 of 2) exon (NM_001038499, exon 2 of 2) 4155 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-9 chr7 24083536 24083838 + 0.310474156842889 NA intron (NM_001289637, intron 1 of 3) intron (NM_001289637, intron 1 of 3) 1790 NM_001289637 210135 Mm.32254 NM_172483 ENSMUSG00000057101 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-9 chr4 149049704 149049949 + 0.310474156842889 NA intron (NM_019781, intron 2 of 8) intron (NM_019781, intron 2 of 8) 49986 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-6 chr11 103033388 103033623 + 0.310474156842889 NA intron (NM_008707, intron 1 of 11) B1_Mur4|SINE|Alu 4962 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889 chr1 155233800 155234089 + 0.310474156842889 NA Intergenic Intergenic 75241 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-20 chr5 53809771 53810073 + 0.310474156842889 NA intron (NM_144517, intron 1 of 20) intron (NM_144517, intron 1 of 20) 295 NM_144517 67249 Mm.28823 NM_144517 ENSMUSG00000039178 Tbc1d19 2810453K03Rik TBC1 domain family, member 19 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-15 chr19 17386627 17386852 + 0.310474156842889 NA Intergenic Intergenic -7304 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-16 chr2 27801638 27801886 + 0.310474156842889 NA Intergenic Intergenic -84663 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-10 chr4 122884338 122884558 + 0.310474156842889 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 1628 NM_001358035 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-3 chr11 16791165 16791359 + 0.310474156842889 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 39059 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-27 chr6 31034368 31034641 + 0.310474156842889 NA Intergenic Intergenic 28243 NR_029744 387222 NR_029744 ENSMUSG00000065610 Mir29a Mirn29a|mir-29a|mmu-mir-29a microRNA 29a ncRNA common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-11 chr4 126251316 126251674 + 0.310474156842889 NA intron (NM_001145970, intron 1 of 16) MIR|SINE|MIR 4824 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-2 chr1 152793185 152793433 + 0.310474156842889 NA Intergenic Intergenic -6844 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889 chr1 192449781 192450033 + 0.310474156842889 NA intron (NM_001038607, intron 10 of 10) intron (NM_001038607, intron 10 of 10) 259130 NM_010600 16510 Mm.4489 NM_010600 ENSMUSG00000058248 Kcnh1 EAG1|Kv10.1|M-eag potassium voltage-gated channel, subfamily H (eag-related), member 1 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-18 chr3 126273309 126273595 + 0.310474156842889 NA Intergenic Intergenic -90400 NM_173451 271970 Mm.317021 NM_173451 ENSMUSG00000046561 Arsj 9330196J05Rik|D830047F08 arylsulfatase J protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-14 chr8 35663921 35664126 + 0.310474156842889 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -75003 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-12 chr13 95450233 95450577 + 0.310474156842889 NA Intergenic Intergenic -5574 NM_198408 12919 Mm.316614 NM_198408 ENSMUSG00000021680 Crhbp CRH-BP corticotropin releasing hormone binding protein protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-10 chr16 23897961 23898173 + 0.310474156842889 NA Intergenic Intergenic -7223 NM_009215 20604 Mm.2453 NM_009215 ENSMUSG00000004366 Sst SOM|SRIF|SS|Smst somatostatin protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-16 chr9 63647998 63648245 + 0.310474156842889 NA 3' UTR (NM_016769, exon 9 of 9) 3' UTR (NM_016769, exon 9 of 9) 45475 NR_151671 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889 chr1 133019328 133019532 + 0.310474156842889 NA 5' UTR (NM_008575, exon 2 of 12) 5' UTR (NM_008575, exon 2 of 12) 5986 NR_126506 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-23 chr5 142811115 142811553 + 0.310474156842889 NA intron (NM_178242, intron 2 of 15) L2a|LINE|L2 6053 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-6 chr12 13208727 13209014 + 0.310474156842889 NA Intergenic Intergenic 40304 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-4 chr11 104363861 104364179 + 0.310474156842889 NA intron (NM_001359634, intron 5 of 14) intron (NM_001359634, intron 5 of 14) 78271 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-2 chr10 99267254 99267484 + 0.310474156842889 NA 3' UTR (NM_026268, exon 3 of 3) 3' UTR (NM_026268, exon 3 of 3) 4138 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-15 chr16 35510343 35510652 + 0.310474156842889 NA Intergenic Intergenic -1078 NR_040481 69768 Mm.396136 NR_040481 ENSMUSG00000099429 1600019K03Rik - RIKEN cDNA 1600019K03 gene ncRNA common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-3 chr11 94159587 94159878 + 0.310474156842889 NA Intergenic Intergenic -51722 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-3 chr11 77766958 77767275 + 0.310474156842889 NA Intergenic Intergenic -10119 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-7 chr15 89110036 89110226 + 0.310474156842889 NA exon (NM_001163319, exon 5 of 25) exon (NM_001163319, exon 5 of 25) 13019 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-6 chr11 20916347 20916625 + 0.310474156842889 NA Intergenic Intergenic -85378 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-14 chrX 151802558 151802796 + 0.310474156842889 NA promoter-TSS (NM_021523) promoter-TSS (NM_021523) -605 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-11 chr7 34133419 34133634 + 0.310474156842889 NA promoter-TSS (NM_207212) promoter-TSS (NM_207212) -258 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-28 chr7 6286039 6286298 + 0.310474156842889 NA promoter-TSS (NM_001024928) promoter-TSS (NM_001024928) -412 NM_001024928 384763 Mm.276279 NM_001024928 ENSMUSG00000054893 Zfp667 A830025F02Rik|Mip1|ZNF667 zinc finger protein 667 protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-6 chr17 32829708 32829928 + 0.310474156842889 NA intron (NM_001360479, intron 1 of 3) intron (NM_001360479, intron 1 of 3) 443 NM_001293229 240064 Mm.476307 NM_177359 ENSMUSG00000095253 Zfp799 6030490I01Rik zinc finger protein 799 protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-13 chr17 25832605 25832868 + 0.310474156842889 NA TTS (NM_028101) TTS (NM_028101) 625 NM_019719 56424 Mm.277599 NM_019719 ENSMUSG00000039615 Stub1 0610033N24Rik|2210017D18Rik|2310040B03Rik|AW046544|Chip STIP1 homology and U-Box containing protein 1 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-7 chr12 24831200 24831405 + 0.310474156842889 NA promoter-TSS (NM_001083341) promoter-TSS (NM_001083341) -297 NM_026037 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-9 chr5 13982685 13982941 + 0.310474156842889 NA Intergenic Intergenic -42463 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-12 chr2 137729907 137730200 + 0.310474156842889 NA Intergenic Intergenic -526531 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-9 chr13 60873762 60874039 + 0.310474156842889 NA Intergenic Intergenic -9484 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-3 chr3 30105310 30105517 + 0.310474156842889 NA intron (NM_001361034, intron 2 of 16) intron (NM_001361034, intron 2 of 16) -92209 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-2 chr1 151677845 151678072 + 0.310474156842889 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) 76769 NR_151474 102640772 NR_151473 ENSMUSG00000100594 2810414N06Rik - RIKEN cDNA 2810414N06 gene ncRNA common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-3 chr12 52783142 52783384 + 0.310474156842889 NA intron (NM_198111, intron 1 of 13) intron (NM_198111, intron 1 of 13) 83880 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-16 chr6 97872002 97872219 + 0.310474156842889 NA intron (NM_001113198, intron 1 of 9) intron (NM_001113198, intron 1 of 9) -57707 NM_001178049 17342 Mm.333284 NM_008601 ENSMUSG00000035158 Mitf BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit melanogenesis associated transcription factor protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-18 chr2 28525520 28525885 + 0.310474156842889 NA intron (NM_009058, intron 1 of 17) intron (NM_009058, intron 1 of 17) -7762 NM_001145835 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-5 chr11 118379457 118379717 + 0.310474156842889 NA Intergenic Intergenic 22372 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-7 chr4 64075770 64076055 + 0.310474156842889 NA Intergenic Intergenic -28897 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-16 chr18 53743673 53743890 + 0.310474156842889 NA intron (NM_178686, intron 2 of 20) intron (NM_178686, intron 2 of 20) 766 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-4 chr16 24183666 24183879 + 0.310474156842889 NA Intergenic Intergenic -101082 NR_155457 108168278 Mm.417246 NR_155457 Gm46545 - predicted gene, 46545 ncRNA common_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-7 chr17 45790864 45791070 + 0.310474156842889 NA Intergenic Intergenic 56461 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-11 chr16 92963285 92963543 + 0.310474156842889 NA Intergenic Intergenic -137340 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-6 chr19 38976594 38976815 + 0.310474156842889 NA Intergenic Intergenic -30315 NM_028089 72082 Mm.142581 NM_028089 ENSMUSG00000025002 Cyp2c55 2010318C06Rik cytochrome P450, family 2, subfamily c, polypeptide 55 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-12 chr4 100188739 100188952 + 0.310474156842889 NA intron (NM_013845, intron 1 of 8) MIR3|SINE|MIR 93054 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-5 chr15 66881437 66881658 + 0.310474156842889 NA Intergenic Intergenic -9846 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-8 chr6 7856616 7856861 + 0.310474156842889 NA intron (NM_052993, intron 1 of 3) intron (NM_052993, intron 1 of 3) 11514 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889 chr1 6360711 6361069 + 0.310474156842889 NA intron (NM_001195732, intron 1 of 4) intron (NM_001195732, intron 1 of 4) 1559 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding unique_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-6 chr12 79597263 79597510 + 0.310474156842889 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 300035 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889 chr1 118343569 118343778 + 0.310474156842889 NA Intergenic Intergenic 21830 NM_026472 67949 Mm.280311 NM_026472 ENSMUSG00000026377 Nifk AI852665|C130020J04Rik|Mki67ip nucleolar protein interacting with the FHA domain of MKI67 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-12 chr8 67280957 67281195 + 0.310474156842889 NA Intergenic Intergenic -209682 NM_008673 17960 Mm.14125 NM_008673 ENSMUSG00000025588 Nat1 Nat-1 N-acetyl transferase 1 protein-coding common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-13 chr7 37653497 37653705 + 0.310474156842889 NA intron (NM_172385, intron 2 of 5) intron (NM_172385, intron 2 of 5) 116151 NM_172385 243937 Mm.322505 NM_172385 ENSMUSG00000043456 Zfp536 9630010P11Rik|Znf536|mKIAA0390 zinc finger protein 536 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-19 chr2 32903776 32904011 + 0.310474156842889 NA intron (NM_146119, intron 1 of 13) intron (NM_146119, intron 1 of 13) 27759 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-7 chr11 52079707 52079989 + 0.310474156842889 NA intron (NM_001166654, intron 13 of 13) B2_Mm2|SINE|B2 -18976 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-17 chr6 118479100 118479302 + 0.310474156842889 NA promoter-TSS (NM_011763) promoter-TSS (NM_011763) 72 NM_011763 22750 Mm.106970 NM_011763 ENSMUSG00000072623 Zfp9 1810048F22Rik|AU016736|Krox-4|Zfp-9|mszf79-2 zinc finger protein 9 protein-coding common_peak2_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-8 chr15 10748144 10748399 + 0.310474156842889 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 33371 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA unique_peak1_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-7 chr2 30713172 30713412 + 0.310474156842889 NA Intergenic Intergenic -7918 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-7 chr17 56614599 56614903 + 0.310474156842889 NA TTS (NM_018730) TTS (NM_018730) 1356 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding unique_peak2_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-4 chr1 193342373 193342776 + 0.310474156842889 NA intron (NM_008484, intron 22 of 22) intron (NM_008484, intron 22 of 22) 27708 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak1_14_11_0.0526250240512174_3.61127501274676_0.310474156842889-14 chr19 41318222 41318595 + 0.310474156842889 NA intron (NM_031376, intron 8 of 16) intron (NM_031376, intron 8 of 16) -54404 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_12_12_-0.267846564112734_3.56651643608472_0.310474156842889-10 chr5 151068145 151068406 + 0.310474156842889 NA intron (NM_001359985, intron 3 of 12) intron (NM_001359985, intron 3 of 12) 115668 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho protein-coding unique_peak2_13_11_-0.0462084273559866_3.56185828704316_0.310474156842889-14 chr8 126699238 126699480 + 0.310474156842889 NA Intergenic Intergenic -105923 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-2 chr16 16983424 16983936 + 0.310471923828336 NA exon (NM_011949, exon 1 of 9) exon (NM_011949, exon 1 of 9) 298 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-4 chr8 11542490 11543038 + 0.310471923828336 NA intron (NM_001359137, intron 3 of 14) intron (NM_001359137, intron 3 of 14) 8007 NM_024248 71941 Mm.196576 NM_024248 ENSMUSG00000056228 Cars2 2310051N18Rik|2410044A07Rik|D530030H10Rik|cysRS cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336-5 chr4 32238894 32239277 + 0.310471923828336 NA Intergenic CpG -178350 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336-2 chr13 99515862 99516690 + 0.310471923828336 NA intron (NM_008634, intron 1 of 6) CpG 326 NM_008634 17755 Mm.4173 NM_008634 ENSMUSG00000052727 Map1b A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5 microtubule-associated protein 1B protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336-6 chr6 82881070 82882017 + 0.310471923828336 NA intron (NR_040520, intron 1 of 3) intron (NR_040520, intron 1 of 3) 310 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak2_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-4 chr5 107087601 107088384 + 0.310471923828336 NA Intergenic L2a|LINE|L2 123431 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336-3 chr15 66733035 66733587 + 0.310471923828336 NA intron (NM_009375, intron 27 of 47) intron (NM_009375, intron 27 of 47) 62541 NM_009375 21819 Mm.441333 NM_009375 ENSMUSG00000053469 Tg Tgn|cog thyroglobulin protein-coding common_peak1_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-2 chr16 24496878 24497776 + 0.310471923828336 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -31987 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-6 chr9 92538033 92538805 + 0.310471923828336 NA TTS (NR_029474) TTS (NR_029474) -3804 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak1_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-3 chr17 6947879 6948594 + 0.310471923828336 NA 5' UTR (NM_001083945, exon 1 of 8) 5' UTR (NM_001083945, exon 1 of 8) 120 NM_001083945 100037282 Mm.29830 NM_001083945 ENSMUSG00000023806 Rsph3b Rshl2b radial spoke 3B homolog (Chlamydomonas) protein-coding common_peak2_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-5 chr7 132852279 132852786 + 0.310471923828336 NA exon (NM_001347629, exon 1 of 4) exon (NM_001347629, exon 1 of 4) 115 NM_028095 72096 Mm.28631 NM_028095 ENSMUSG00000030960 Eef1akmt2 2010208K18Rik|Mettl10 EEF1A lysine methyltransferase 2 protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336 chr11 103966785 103967297 + 0.310471923828336 NA 5' UTR (NM_007477, exon 1 of 5) 5' UTR (NM_007477, exon 1 of 5) 170 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak1_56_45_0.0264371007155884_5.53678050641481_0.310471923828336 chr11 48980344 48981036 + 0.310471923828336 NA Intergenic Intergenic -1292 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336-7 chr8 121950147 121950489 + 0.310471923828336 NA promoter-TSS (NM_001110100) promoter-TSS (NM_001110100) -174 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_54_47_-0.086130199370217_5.54189740103605_0.310471923828336-4 chr19 6969228 6969729 + 0.310471923828336 NA intron (NM_001290349, intron 1 of 30) intron (NM_001290349, intron 1 of 30) 336 NM_008874 18797 Mm.273204 NM_008874 ENSMUSG00000024960 Plcb3 mKIAA4098 phospholipase C, beta 3 protein-coding common_peak2_56_45_0.0264371007155884_5.53678050641481_0.310471923828336-3 chr4 99120374 99120849 + 0.310471923828336 NA intron (NM_026082, intron 1 of 47) CpG 304 NM_001290636 67299 Mm.260623 NM_026082 ENSMUSG00000028556 Dock7 3110056M06Rik|Gm430 dedicator of cytokinesis 7 protein-coding common_peak2_56_45_0.0264371007155884_5.53678050641481_0.310471923828336 chr15 93337027 93337502 + 0.310471923828336 NA promoter-TSS (NR_028315) promoter-TSS (NR_028315) -329 NM_024189 67057 Mm.4714 NM_024189 ENSMUSG00000022634 Yaf2 2810021M11Rik YY1 associated factor 2 protein-coding common_peak1_128_102_0.0335226256804244_6.70326184002343_0.310471510585226 chr19 5911694 5912744 + 0.310471510585226 NA intron (NM_011262, intron 1 of 10) intron (NM_011262, intron 1 of 10) 652 NM_011262 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak1_127_102_0.022374578314845_6.69768781634064_0.310471510585226 chr7 78913862 78914811 + 0.310471510585226 NA 5' UTR (NM_001291220, exon 2 of 4) 5' UTR (NM_001291220, exon 2 of 4) 101 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding common_peak1_127_102_0.022374578314845_6.69768781634064_0.310471510585226-2 chr8 12571889 12573337 + 0.310471510585226 NA promoter-TSS (NM_001357297) promoter-TSS (NM_001357297) -423 NM_001357297 78634 Mm.116871 NM_024279 ENSMUSG00000010435 Spaca7 1700094C09Rik sperm acrosome associated 7 protein-coding common_peak1_222_186_-0.0427697869034196_7.52550956643593_0.310471365970655 chr7 133120982 133123308 + 0.310471365970655 NA intron (NM_009980, intron 1 of 10) CpG 1338 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_227_182_0.0201892593420707_7.52579446795508_0.310471365970605 chr19 6276947 6278194 + 0.310471365970605 NA intron (NM_010119, intron 1 of 4) intron (NM_010119, intron 1 of 4) 674 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak2_129_103_0.0306453959214119_6.7157624161018_0.310381154924161 chr15 97828503 97830252 + 0.310381154924161 NA intron (NM_001204276, intron 1 of 25) intron (NM_001204276, intron 1 of 25) 2390 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_129_103_0.0306453959214119_6.7157624161018_0.310381154924161 chr5 65491976 65493395 + 0.310381154924161 NA intron (NM_133697, intron 1 of 4) CpG 150 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding common_peak2_129_103_0.0306453959214119_6.7157624161018_0.310381154924161-2 chr8 90827914 90829126 + 0.310381154924161 NA promoter-TSS (NM_177224) promoter-TSS (NM_177224) -315 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_125_106_-0.0551516677275554_6.71389115253737_0.310381154924136 chr7 19664484 19665998 + 0.310381154924136 NA promoter-TSS (NM_019649) promoter-TSS (NM_019649) -211 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding common_peak1_361_289_0.0182305204699489_8.18902435024991_0.310341741076563 chr18 50061446 50064776 + 0.310341741076563 NA intron (NM_134131, intron 1 of 1) intron (NM_134131, intron 1 of 1) -9449 NR_155293 102635912 Mm.440627 NR_155293 C030005K06Rik - RIKEN cDNA C030005K06 gene ncRNA common_peak2_226_189_-0.0402632982361029_7.5497239592129_0.31031989431393 chr3 51276399 51278214 + 0.31031989431393 NA non-coding (NR_073429, exon 1 of 1) non-coding (NR_073429, exon 1 of 1) 208 NM_001291063 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_356_295_-0.031237815637402_8.19383445781025_0.310309905272625 chr19 60789373 60791574 + 0.310309905272625 NA exon (NM_010123, exon 1 of 22) exon (NM_010123, exon 1 of 22) 220 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding common_peak1_126_107_-0.0572478805895527_6.72626356186869_0.310292512341411 chr11 86652904 86654134 + 0.310292512341411 NA intron (NM_001356531, intron 5 of 11) intron (NM_001356531, intron 5 of 11) 17756 NM_001356531 75909 Mm.390398 NM_029478 ENSMUSG00000018171 Vmp1 3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2 vacuole membrane protein 1 protein-coding common_peak1_126_107_-0.0572478805895527_6.72626356186869_0.310292512341411-2 chr2 32966490 32967663 + 0.310292512341411 NA Intergenic CpG 3775 NR_002898 104367 Mm.250030 NR_002898 ENSMUSG00000065124 Snora65 MBII-351|Rnu65 small nucleolar RNA, H/ACA box 65 snoRNA common_peak1_130_104_0.0278167907762681_6.72815391305426_0.310292512341386 chr8 121116164 121117319 + 0.310292512341386 NA exon (NM_013519, exon 1 of 1) exon (NM_013519, exon 1 of 1) 570 NM_013519 14234 Mm.14092 NM_013519 ENSMUSG00000046714 Foxc2 Fkh14|Hfhbf3|MFH-1|Mfh1 forkhead box C2 protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-6 chr19 47050405 47050802 + 0.31027100108714 NA exon (NM_027654, exon 1 of 10) exon (NM_027654, exon 1 of 10) 303 NM_001360632 71041 Mm.35413 NM_027654 ENSMUSG00000025050 Pcgf6 4933407A11Rik|AI604840|MBLR|Rnf134 polycomb group ring finger 6 protein-coding common_peak1_57_46_0.020324169699629_5.56475093652745_0.31027100108714-2 chr6 108234031 108234596 + 0.31027100108714 NA intron (NM_010585, intron 2 of 61) intron (NM_010585, intron 2 of 61) 21217 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak2_58_46_0.0448122336450423_5.57699496850016_0.31027100108714-2 chr5 25497857 25498735 + 0.31027100108714 NA intron (NM_001081383, intron 1 of 58) CpG 487 NM_001081383 231051 Mm.332268 NM_001081383 ENSMUSG00000038056 Kmt2c E330008K23Rik|HALR|Mll3|mKIAA1506 lysine (K)-specific methyltransferase 2C protein-coding common_peak2_57_46_0.020324169699629_5.56475093652745_0.31027100108714-5 chr3 107760464 107761227 + 0.31027100108714 NA promoter-TSS (NM_001113530) promoter-TSS (NM_001113530) -376 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-5 chr17 25985259 25985779 + 0.31027100108714 NA non-coding (NR_151779, exon 1 of 11) non-coding (NR_151779, exon 1 of 11) 277 NR_151779 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak2_57_46_0.020324169699629_5.56475093652745_0.31027100108714-2 chr12 86831737 86832355 + 0.31027100108714 NA Intergenic Intergenic 52768 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-4 chr15 99851011 99852135 + 0.31027100108714 NA intron (NM_001113545, intron 1 of 10) intron (NM_001113545, intron 1 of 10) 23883 NM_001113545 65970 Mm.33207 NM_023063 ENSMUSG00000023022 Lima1 Eplin LIM domain and actin binding 1 protein-coding common_peak2_58_46_0.0448122336450423_5.57699496850016_0.31027100108714-3 chr5 149184682 149185264 + 0.31027100108714 NA intron (NM_001115151, intron 1 of 8) CpG 413 NM_001359957 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-8 chr7 133123597 133124300 + 0.31027100108714 NA promoter-TSS (NM_009980) promoter-TSS (NM_009980) -465 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_58_46_0.0448122336450423_5.57699496850016_0.31027100108714-3 chr9 114401164 114401703 + 0.31027100108714 NA intron (NR_108101, intron 1 of 14) CpG 338 NM_001200002 100504715 Mm.290516 NM_001200002 ENSMUSG00000079260 Tmppe - transmembrane protein with metallophosphoesterase domain protein-coding common_peak1_57_46_0.020324169699629_5.56475093652745_0.31027100108714 chr11 70982148 70982977 + 0.31027100108714 NA intron (NM_007573, intron 1 of 5) intron (NM_007573, intron 1 of 5) 464 NM_007573 12261 Mm.30049 NM_007573 ENSMUSG00000018446 C1qbp AA407365|AA986492|D11Wsu182e|HABP1|P32|gC1qBP complement component 1, q subcomponent binding protein protein-coding common_peak2_57_46_0.020324169699629_5.56475093652745_0.31027100108714-4 chr15 62204588 62205303 + 0.31027100108714 NA intron (NR_132746, intron 3 of 6) intron (NR_132746, intron 3 of 6) 14506 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714 chr12 108178602 108179363 + 0.31027100108714 NA promoter-TSS (NM_009832) promoter-TSS (NM_009832) 302 NM_028262 52690 Mm.159185 NM_028262 ENSMUSG00000056770 Setd3 2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e SET domain containing 3 protein-coding common_peak2_57_46_0.020324169699629_5.56475093652745_0.31027100108714-6 chr9 71771063 71771886 + 0.31027100108714 NA 5' UTR (NM_001304362, exon 1 of 19) 5' UTR (NM_001304362, exon 1 of 19) 128 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_57_46_0.020324169699629_5.56475093652745_0.31027100108714 chr11 29526192 29526768 + 0.31027100108714 NA promoter-TSS (NM_133767) promoter-TSS (NM_133767) 83 NM_133767 76784 Mm.285429 NM_133767 ENSMUSG00000020459 Mtif2 2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt) mitochondrial translational initiation factor 2 protein-coding common_peak2_58_46_0.0448122336450423_5.57699496850016_0.31027100108714 chr2 78869036 78869968 + 0.31027100108714 NA promoter-TSS (NR_151458) promoter-TSS (NR_151458) -176 NR_151458 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-3 chr15 78531149 78531982 + 0.31027100108714 NA Intergenic B1_Mur4|SINE|Alu -1914 NM_028331 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak2_57_46_0.020324169699629_5.56475093652745_0.31027100108714-3 chr12 102286225 102286569 + 0.31027100108714 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 2756 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714 chr6 56714913 56715430 + 0.31027100108714 NA exon (NM_030235, exon 1 of 16) exon (NM_030235, exon 1 of 16) 266 NM_030235 78937 Mm.105343 NM_030235 ENSMUSG00000029787 Avl9 5830411G16Rik|D730049P16Rik|mKIAA0241 AVL9 cell migration associated protein-coding common_peak1_58_46_0.0448122336450423_5.57699496850016_0.31027100108714 chr19 55740760 55741400 + 0.31027100108714 NA promoter-TSS (NM_001331147) promoter-TSS (NM_001331147) -730 NM_001331147 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-7 chr6 85372519 85373095 + 0.31027100108714 NA intron (NM_001003955, intron 1 of 5) intron (NM_001003955, intron 1 of 5) 1827 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak2_55_48_-0.0900657298965282_5.56967697916694_0.31027100108714-2 chr13 29503793 29504846 + 0.31027100108714 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 351354 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak1_58_46_0.0448122336450423_5.57699496850016_0.31027100108714-2 chr2 59829630 59830573 + 0.31027100108714 NA intron (NM_001290659, intron 18 of 25) intron (NM_001290659, intron 18 of 25) 52505 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak2_127_108_-0.0593092192788625_6.73852971513749_0.310205534574957 chr2 127333551 127335268 + 0.310205534574957 NA Intergenic Intergenic -1750 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_127_108_-0.0593092192788625_6.73852971513749_0.310205534574957 chr13 32478295 32480075 + 0.310205534574957 NA Intergenic Intergenic -140641 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_128_108_-0.0481611719132831_6.74410373882028_0.310205534574957 chr5 65696996 65697943 + 0.310205534574957 NA intron (NM_001081321, intron 1 of 31) CpG-11111 387 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak2_231_193_-0.0391097799563491_7.58035795220895_0.310125334275561 chr19 5724927 5726234 + 0.310125334275561 NA intron (NM_001114595, intron 1 of 17) intron (NM_001114595, intron 1 of 17) 737 NM_001114595 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding common_peak1_129_109_-0.0502745994621563_6.75622241379358_0.310120175158473 chr8 110814230 110815309 + 0.310120175158473 NA intron (NM_133953, intron 20 of 25) intron (NM_133953, intron 20 of 25) -8845 NM_001135100 76527 Mm.77697 NM_029646 ENSMUSG00000031750 Il34 2010004A03Rik|AI593503 interleukin 34 protein-coding common_peak2_133_106_0.0330310516659971_6.75798251223415_0.310120175158448 chr7 35055475 35056913 + 0.310120175158448 NA intron (NM_009884, intron 1 of 1) CpG 372 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak2_132_106_0.0223005381448864_6.75261725547359_0.310120175158448 chr15 66888322 66889589 + 0.310120175158448 NA Intergenic MIRc|SINE|MIR -2438 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding unique_peak2_59_47_0.038515064904729_5.60422003317352_0.310078451983505 chr2 22894982 22895861 + 0.310078451983505 NA promoter-TSS (NM_019501) promoter-TSS (NM_019501) -101 NM_019501 56075 Mm.249752 NM_019501 ENSMUSG00000026784 Pdss1 2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1 prenyl (solanesyl) diphosphate synthase, subunit 1 protein-coding common_peak1_59_47_0.038515064904729_5.60422003317352_0.310078451983505-2 chr4 141309692 141310376 + 0.310078451983505 NA intron (NM_010139, intron 3 of 16) MIR3|SINE|MIR 8813 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak2_56_49_-0.0938571330021229_5.59692762327366_0.310078451983505 chr2 74711871 74712524 + 0.310078451983505 NA 5' UTR (NM_010468, exon 1 of 3) 5' UTR (NM_010468, exon 1 of 3) 204 NM_010468 15434 Mm.430708 NM_010468 ENSMUSG00000079277 Hoxd3 Hox-4.1|Hox-5.5 homeobox D3 protein-coding common_peak1_59_47_0.038515064904729_5.60422003317352_0.310078451983505 chr12 81860013 81860855 + 0.310078451983505 NA exon (NM_018814, exon 1 of 36) exon (NM_018814, exon 1 of 36) 404 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog protein-coding common_peak1_56_49_-0.0938571330021229_5.59692762327366_0.310078451983505-2 chr9 23222733 23223566 + 0.310078451983505 NA promoter-TSS (NM_028472) promoter-TSS (NM_028472) 73 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak2_59_47_0.038515064904729_5.60422003317352_0.310078451983505-4 chr8 35915270 35915823 + 0.310078451983505 NA Intergenic Intergenic -32589 NR_046181 330737 Mm.381743 NR_046181 ENSMUSG00000109761 5430403N17Rik 5430403N17 RIKEN cDNA 5430403N17 gene ncRNA common_peak2_56_49_-0.0938571330021229_5.59692762327366_0.310078451983505-3 chr6 128299787 128300442 + 0.310078451983505 NA intron (NM_001080979, intron 1 of 10) intron (NM_001080979, intron 1 of 10) 699 NM_001080979 21679 Mm.14774 NM_011567 ENSMUSG00000030353 Tead4 ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a TEA domain family member 4 protein-coding common_peak1_56_49_-0.0938571330021229_5.59692762327366_0.310078451983505 chr3 129533584 129534452 + 0.310078451983505 NA intron (NM_130450, intron 2 of 4) CpG -1630 NR_153368 102639747 Mm.393257 NR_153368 Gm35986 - predicted gene, 35986 ncRNA common_peak2_59_47_0.038515064904729_5.60422003317352_0.310078451983505 chr17 46650524 46651152 + 0.310078451983505 NA TTS (NM_001316742) TTS (NM_001316742) 500 NM_025611 66515 Mm.329078 NM_025611 ENSMUSG00000038545 Cul7 2510004L20Rik|AA409809|C230011P08Rik|p185|p193 cullin 7 protein-coding common_peak2_59_47_0.038515064904729_5.60422003317352_0.310078451983505-2 chr19 4162693 4163285 + 0.310078451983505 NA intron (NR_153661, intron 1 of 14) intron (NR_153661, intron 1 of 14) 394 NR_153661 58988 Mm.271937 NM_021485 ENSMUSG00000024830 Rps6kb2 S6K-beta-2|S6K2 ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_59_47_0.038515064904729_5.60422003317352_0.310078451983505-3 chr5 129886667 129887247 + 0.310078451983505 NA intron (NM_024166, intron 1 of 3) intron (NM_024166, intron 1 of 3) 513 NM_024166 14004 Mm.30133 NM_024166 ENSMUSG00000070493 Chchd2 AL033347|Etohi6 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding common_peak2_56_49_-0.0938571330021229_5.59692762327366_0.310078451983505-2 chr6 82880979 82882003 + 0.310078451983505 NA intron (NR_040520, intron 1 of 3) intron (NR_040520, intron 1 of 3) 362 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak1_130_110_-0.0523535579077157_6.76823908739625_0.310036389339139 chr18 61175949 61177529 + 0.310036389339139 NA 5' UTR (NM_178277, exon 1 of 20) 5' UTR (NM_178277, exon 1 of 20) 310 NM_178277 106894 Mm.22574 NM_134134 ENSMUSG00000024622 Hmgxb3 2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194 HMG box domain containing 3 protein-coding common_peak2_131_111_-0.054398896806334_6.78015547365444_0.309954133999477 chr11 29546990 29548425 + 0.309954133999477 NA promoter-TSS (NM_028504) promoter-TSS (NM_028504) -243 NM_028504 73324 Mm.69388 NM_028504 ENSMUSG00000020461 Clhc1 1700034F02Rik clathrin heavy chain linker domain containing 1 protein-coding common_peak1_131_111_-0.054398896806334_6.78015547365444_0.309954133999477 chr11 6415867 6416868 + 0.309954133999477 NA intron (NM_008907, intron 1 of 4) CpG 497 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak2_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769 chr1 59685088 59685746 + 0.309893763698769 NA intron (NM_018868, intron 1 of 14) intron (NM_018868, intron 1 of 14) 411 NM_018868 55989 Mm.220367 NM_018868 ENSMUSG00000026020 Nop58 MSSP|Nol5|SIK|nop5 NOP58 ribonucleoprotein protein-coding common_peak2_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-2 chr13 49681804 49682918 + 0.309893763698769 NA intron (NM_172015, intron 1 of 33) intron (NM_172015, intron 1 of 33) 231 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak1_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-5 chr7 126629356 126630361 + 0.309893763698769 NA Intergenic Intergenic -4388 NM_019738 56312 Mm.18742 NM_019738 ENSMUSG00000030717 Nupr1 2310032H04Rik|Com1|p8 nuclear protein transcription regulator 1 protein-coding common_peak2_60_48_0.0324462251876678_5.63093295670904_0.309893763698769 chr1 88008056 88008544 + 0.309893763698769 NA intron (NM_001033291, intron 1 of 27) CpG 251 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding common_peak2_57_50_-0.0975123205942285_5.62366918167438_0.309893763698769-3 chr16 49938103 49939092 + 0.309893763698769 NA Intergenic Intergenic -17233 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA common_peak2_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-4 chr18 38801610 38802232 + 0.309893763698769 NA Intergenic Intergenic -90535 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding common_peak2_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-3 chr15 79346430 79347138 + 0.309893763698769 NA promoter-TSS (NM_010755) promoter-TSS (NM_010755) 163 NM_001304830 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_60_48_0.0324462251876678_5.63093295670904_0.309893763698769 chr2 116972349 116973099 + 0.309893763698769 NA Intergenic Intergenic 72572 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak1_57_50_-0.0975123205942285_5.62366918167438_0.309893763698769 chr12 3235472 3236201 + 0.309893763698769 NA promoter-TSS (NR_015551) promoter-TSS (NR_015551) 45 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA common_peak2_60_48_0.0324462251876678_5.63093295670904_0.309893763698769-3 chr2 167764319 167765153 + 0.309893763698769 NA Intergenic MIR|SINE|MIR 73559 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_57_50_-0.0975123205942285_5.62366918167438_0.309893763698769-2 chr14 30875857 30876775 + 0.309893763698769 NA 3' UTR (NM_028839, exon 8 of 8) 3' UTR (NM_028839, exon 8 of 8) -2941 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak2_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-5 chr2 164486593 164487149 + 0.309893763698769 NA promoter-TSS (NM_001048228) promoter-TSS (NM_001048228) -6 NM_001048228 52840 Mm.256927 NM_026797 ENSMUSG00000017734 Dbndd2 1110017A21Rik|2900022J10Rik|AU041050|AW048677|D2Bwg0891e|Nkip|R74724 dysbindin (dystrobrevin binding protein 1) domain containing 2 protein-coding common_peak1_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769 chr1 128357809 128358792 + 0.309893763698769 NA intron (NM_008567, intron 1 of 16) intron (NM_008567, intron 1 of 16) 1405 NM_001313695 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak1_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-3 chr4 126202892 126203415 + 0.309893763698769 NA promoter-TSS (NM_146153) promoter-TSS (NM_146153) -443 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak1_57_50_-0.0975123205942285_5.62366918167438_0.309893763698769-2 chr9 102643215 102643940 + 0.309893763698769 NA Intergenic Intergenic 17281 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_60_48_0.0324462251876678_5.63093295670904_0.309893763698769-2 chr8 123477116 123477717 + 0.309893763698769 NA promoter-TSS (NM_054070) promoter-TSS (NM_054070) -446 NM_054070 114896 Mm.287475 NM_054070 ENSMUSG00000031967 Afg3l1 1700047G05Rik|3110061K15Rik AFG3-like AAA ATPase 1 protein-coding common_peak1_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-4 chr7 25237053 25237820 + 0.309893763698769 NA exon (NM_001031667, exon 1 of 11) exon (NM_001031667, exon 1 of 11) 415 NM_001031667 606496 Mm.491101 NM_001031667 ENSMUSG00000057177 Gsk3a 2700086H06Rik glycogen synthase kinase 3 alpha protein-coding common_peak2_57_50_-0.0975123205942285_5.62366918167438_0.309893763698769-4 chr17 88542298 88542892 + 0.309893763698769 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 12471 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak2_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-6 chr5 139344376 139345127 + 0.309893763698769 NA intron (NM_197980, intron 1 of 2) intron (NM_197980, intron 1 of 2) 415 NM_197980 68033 Mm.261064 NM_197980 ENSMUSG00000045438 Cox19 1810074D02Rik|2810437L13Rik cytochrome c oxidase assembly protein 19 protein-coding common_peak2_60_48_0.0324462251876678_5.63093295670904_0.309893763698769-2 chr15 3995363 3995803 + 0.309893763698769 NA promoter-TSS (NR_045740) promoter-TSS (NR_045740) 169 NM_145930 106064 Mm.21299 NM_145930 ENSMUSG00000041935 AW549877 AI195826 expressed sequence AW549877 protein-coding common_peak1_58_50_-0.0730242566488153_5.63591321364709_0.309893763698769-2 chr13 102894549 102895658 + 0.309893763698769 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 134848 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_57_50_-0.0975123205942285_5.62366918167438_0.309893763698769 chr1 134063458 134063828 + 0.309893763698769 NA Intergenic Intergenic 15512 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_242_194_0.0198327620322143_7.61724669476572_0.309893302172489 chr9 57764337 57765896 + 0.309893302172489 NA exon (NM_007713, exon 1 of 13) exon (NM_007713, exon 1 of 13) 744 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak1_133_112_-0.0456809243480443_6.79733850024117_0.309873367582622 chr15 85667208 85667949 + 0.309873367582622 NA Intergenic Intergenic -36195 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_133_112_-0.0456809243480443_6.79733850024117_0.309873367582622 chr4 119538938 119540372 + 0.309873367582622 NA promoter-TSS (NM_172699) promoter-TSS (NM_172699) -6 NM_001290696 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding common_peak1_133_112_-0.0456809243480443_6.79733850024117_0.309873367582622-2 chr9 63722111 63723652 + 0.309873367582622 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 35113 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_136_109_0.0248558605911198_6.79378764382022_0.309873367582622 chr16 92550531 92552132 + 0.309873367582622 NA Intergenic Intergenic 53184 NM_172469 209195 Mm.44747 NM_172469 ENSMUSG00000022949 Clic6 5730466J16Rik|AL022908|AW045520|CLIC1L chloride intracellular channel 6 protein-coding common_peak1_244_195_0.0241952388582378_7.62680746354433_0.309848309219042 chr13 51846792 51848871 + 0.309848309219042 NA intron (NM_011817, intron 3 of 3) intron (NM_011817, intron 3 of 3) 1156 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_244_195_0.0241952388582378_7.62680746354433_0.309848309219042 chr1 178317774 178319627 + 0.309848309219042 NA promoter-TSS (NM_025511) promoter-TSS (NM_025511) -453 NM_025511 66359 Mm.489720 NM_025511 ENSMUSG00000026500 Cox20 2310005N03Rik|Fam36a COX20 Cox2 chaperone protein-coding common_peak1_240_200_-0.0357276650706382_7.63318785864361_0.309803770763195 chr13 98924961 98927004 + 0.309803770763195 NA intron (NM_178716, intron 1 of 23) CpG 402 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak2_134_113_-0.0477412440839471_6.80901939212277_0.309794050023144 chr18 60651227 60652595 + 0.309794050023144 NA Intergenic Intergenic -11499 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_137_110_0.0222180581003588_6.80552489540029_0.309794050023144-2 chr8 25275254 25276415 + 0.309794050023144 NA Intergenic Intergenic 30436 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_137_110_0.0222180581003588_6.80552489540029_0.309794050023144 chr3 31021650 31023556 + 0.309794050023144 NA intron (NM_008857, intron 2 of 17) intron (NM_008857, intron 2 of 17) -16363 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak1_134_113_-0.0477412440839471_6.80901939212277_0.309794050023144 chr7 49552428 49554327 + 0.309794050023144 NA intron (NM_175272, intron 16 of 37) intron (NM_175272, intron 16 of 37) 83458 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_241_201_-0.0369557013487141_7.63973363207744_0.309759679952886 chr11 98202009 98204424 + 0.309759679952886 NA promoter-TSS (NM_001109626) promoter-TSS (NM_001109626) -89 NM_001109628 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-12 chr9 63717295 63717527 + 0.309718203022949 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 40583 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-16 chr7 67966326 67966656 + 0.309718203022949 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 14234 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-2 chr10 37140724 37140936 + 0.309718203022949 NA Intergenic Intergenic -1904 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-9 chr18 63463920 63464163 + 0.309718203022949 NA Intergenic L1_Mus2|LINE|L1 -76858 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949 chr1 153586163 153586421 + 0.309718203022949 NA Intergenic B1F2|SINE|Alu -36578 NM_028749 74091 Mm.24887 NM_028749 ENSMUSG00000042684 Npl 0610033B02Rik N-acetylneuraminate pyruvate lyase protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-16 chr7 140116022 140116345 + 0.309718203022949 NA intron (NM_053119, intron 1 of 7) intron (NM_053119, intron 1 of 7) 240 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-10 chr5 137069497 137069709 + 0.309718203022949 NA intron (NM_008871, intron 2 of 8) intron (NM_008871, intron 2 of 8) 2669 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-14 chr4 156236059 156236274 + 0.309718203022949 NA exon (NM_021303, exon 2 of 19) exon (NM_021303, exon 2 of 19) 156 NM_021303 57741 Mm.423051 NM_021303 ENSMUSG00000095567 Noc2l AA410003|AF155546|NIR NOC2 like nucleolar associated transcriptional repressor protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-18 chr7 65980739 65981051 + 0.309718203022949 NA intron (NM_011048, intron 12 of 21) intron (NM_011048, intron 12 of 21) -79441 NR_152094 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-16 chr8 91395932 91396158 + 0.309718203022949 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 82520 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-2 chr12 80109799 80110014 + 0.309718203022949 NA exon (NM_007564, exon 2 of 2) exon (NM_007564, exon 2 of 2) 3107 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-14 chr6 115273073 115273306 + 0.309718203022949 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -20984 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-12 chr3 121659740 121659988 + 0.309718203022949 NA Intergenic Intergenic -10899 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-4 chr11 44013352 44013626 + 0.309718203022949 NA Intergenic Intergenic -112252 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-6 chr13 59942139 59942348 + 0.309718203022949 NA Intergenic ORR1F|LTR|ERVL-MaLR -87468 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-20 chr6 17281993 17282220 + 0.309718203022949 NA 3' UTR (NM_001277756, exon 2 of 2) 3' UTR (NM_001277756, exon 2 of 2) 921 NM_016900 12390 Mm.396075 NM_016900 ENSMUSG00000000058 Cav2 AI447843 caveolin 2 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-8 chr19 5964332 5964559 + 0.309718203022949 NA promoter-TSS (NM_008893) promoter-TSS (NM_008893) -239 NM_008893 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-17 chr8 122058247 122058605 + 0.309718203022949 NA Intergenic Intergenic 80402 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-11 chr5 90853494 90853881 + 0.309718203022949 NA Intergenic Intergenic -37558 NM_008176 14825 Mm.21013 NM_008176 ENSMUSG00000029380 Cxcl1 Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro chemokine (C-X-C motif) ligand 1 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-23 chr9 42108101 42108302 + 0.309718203022949 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 16096 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-9 chr17 35910287 35910511 + 0.309718203022949 NA promoter-TSS (NM_001142745) promoter-TSS (NM_001142745) -324 NM_001357865 73242 Mm.273155 NM_028476 ENSMUSG00000024426 Atat1 0610011P08Rik|2610008K08Rik|2610110G12Rik|3110080J08Rik|Mec17|TAT alpha tubulin acetyltransferase 1 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-4 chr11 121697125 121697500 + 0.309718203022949 NA Intergenic Intergenic -5115 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949 chr1 91003510 91003711 + 0.309718203022949 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 4883 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949 chr1 71649211 71649509 + 0.309718203022949 NA intron (NM_001276412, intron 3 of 44) intron (NM_001276412, intron 3 of 44) 3874 NM_001276410 14268 Mm.193099 NM_010233 ENSMUSG00000026193 Fn1 E330027I09|Fn|Fn-1 fibronectin 1 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-2 chr11 74484365 74484586 + 0.309718203022949 NA intron (NM_001015046, intron 3 of 24) intron (NM_001015046, intron 3 of 24) 105683 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-3 chr11 3289134 3289405 + 0.309718203022949 NA non-coding (NR_045109, exon 1 of 4) non-coding (NR_045109, exon 1 of 4) 138 NR_045109 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-2 chr14 43349540 43349792 + 0.309718203022949 NA Intergenic Intergenic -1855 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-11 chr13 54790388 54790587 + 0.309718203022949 NA intron (NM_028841, intron 1 of 7) intron (NM_028841, intron 1 of 7) 1082 NM_028841 74257 Mm.32883 NM_028841 ENSMUSG00000025875 Tspan17 2210021G21Rik|AI047581|Fbxo23|Tm4sf17 tetraspanin 17 protein-coding unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-5 chr2 170155466 170155666 + 0.309718203022949 NA Intergenic Intergenic -12891 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-8 chr16 91728856 91729044 + 0.309718203022949 NA promoter-TSS (NM_133679) promoter-TSS (NM_133679) -148 NM_133679 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949 chr11 58021297 58021564 + 0.309718203022949 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 12366 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-4 chr10 7143839 7144198 + 0.309718203022949 NA intron (NM_172546, intron 4 of 12) intron (NM_172546, intron 4 of 12) 68219 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949 chr1 82554907 82555272 + 0.309718203022949 NA intron (NM_007735, intron 4 of 47) intron (NM_007735, intron 4 of 47) 31760 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-8 chr15 78835362 78835681 + 0.309718203022949 NA Intergenic Intergenic -7126 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-14 chr2 131484571 131485003 + 0.309718203022949 NA Intergenic Intergenic -7075 NM_001177834 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-8 chr11 120467253 120467462 + 0.309718203022949 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 243 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-7 chr5 32132852 32133057 + 0.309718203022949 NA Intergenic Intergenic -3518 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-3 chr10 86114429 86114783 + 0.309718203022949 NA intron (NM_013722, intron 7 of 13) intron (NM_013722, intron 7 of 13) 18752 NR_038024 78170 Mm.444790 NR_038024 ENSMUSG00000112493 4930486F22Rik - RIKEN cDNA 4930486F22 gene ncRNA unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-8 chr6 91191306 91191514 + 0.309718203022949 NA Intergenic Intergenic -21354 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-10 chr2 26643042 26643303 + 0.309718203022949 NA Intergenic Intergenic -2928 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-5 chr2 117670357 117670577 + 0.309718203022949 NA Intergenic Intergenic 142335 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-5 chr13 91371294 91371508 + 0.309718203022949 NA non-coding (NR_045161, exon 3 of 3) non-coding (NR_045161, exon 3 of 3) 16684 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-10 chr2 167865768 167866019 + 0.309718203022949 NA Intergenic Intergenic -66434 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-3 chr1 170701523 170701743 + 0.309718203022949 NA Intergenic Intergenic 57101 NM_177068 320078 Mm.287131 NM_177068 ENSMUSG00000038463 Olfml2b 1110018N05Rik|4832415H08Rik|AI467542 olfactomedin-like 2B protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-9 chr15 96288495 96288694 + 0.309718203022949 NA intron (NM_175251, intron 2 of 20) intron (NM_175251, intron 2 of 20) 1072 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|BAF200|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-13 chrX 57392731 57392931 + 0.309718203022949 NA intron (NM_001166623, intron 1 of 8) CpG 205 NM_011252 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-15 chr6 92465756 92465984 + 0.309718203022949 NA intron (NM_001081146, intron 2 of 8) intron (NM_001081146, intron 2 of 8) 15522 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-5 chr10 43227788 43228133 + 0.309718203022949 NA intron (NM_027772, intron 1 of 7) intron (NM_027772, intron 1 of 7) 6474 NM_001168289 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-10 chr2 51305265 51305510 + 0.309718203022949 NA Intergenic Intergenic 63556 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-2 chr1 92075076 92075288 + 0.309718203022949 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 105159 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-3 chr1 91078866 91079212 + 0.309718203022949 NA exon (NM_001310732, exon 6 of 25) exon (NM_001310732, exon 6 of 25) 25595 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-9 chr13 40720729 40721021 + 0.309718203022949 NA intron (NM_001122948, intron 5 of 6) intron (NM_001122948, intron 5 of 6) -6933 NR_125899 102633805 NR_125899 ENSMUSG00000097752 Gm26688 Tfap2a-as1 predicted gene, 26688 ncRNA unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-7 chr15 36873737 36873983 + 0.309718203022949 NA Intergenic Intergenic -76931 NM_001253806 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-9 chr3 79854891 79855091 + 0.309718203022949 NA Intergenic Intergenic -12329 NM_027495 70652 Mm.46635 NM_027495 ENSMUSG00000027956 Tmem144 1110057I03Rik|5730537D05Rik transmembrane protein 144 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-22 chr7 30590649 30590904 + 0.309718203022949 NA intron (NM_021397, intron 3 of 5) intron (NM_021397, intron 3 of 5) 1396 NR_106134 102465774 NR_106134 ENSMUSG00000098553 Mir3569 Gm27279|mmu-mir-3569 microRNA 3569 ncRNA common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-9 chr2 31758428 31758669 + 0.309718203022949 NA intron (NM_001283047, intron 2 of 11) intron (NM_001283047, intron 2 of 11) -1391 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-5 chr15 28141074 28141306 + 0.309718203022949 NA Intergenic Intergenic -62576 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-17 chr7 142061169 142061372 + 0.309718203022949 NA promoter-TSS (NM_028308) promoter-TSS (NM_028308) -236 NM_028308 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-14 chr6 5447852 5448129 + 0.309718203022949 NA Intergenic Intergenic 48288 NM_013743 27273 Mm.235547 NM_013743 ENSMUSG00000019577 Pdk4 AV005916 pyruvate dehydrogenase kinase, isoenzyme 4 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-12 chr7 45526448 45526674 + 0.309718203022949 NA promoter-TSS (NM_008654) promoter-TSS (NM_008654) 231 NM_148927 69217 Mm.274158 NM_148927 ENSMUSG00000040428 Plekha4 2410005C22Rik|C88169|Pepp1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-13 chr5 115299917 115300150 + 0.309718203022949 NA intron (NM_019682, intron 2 of 2) intron (NM_019682, intron 2 of 2) 957 NM_019682 56455 Mm.256858 NM_019682 ENSMUSG00000009013 Dynll1 Dlc8|Dnclc1|Pin dynein light chain LC8-type 1 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-8 chr3 116804206 116804538 + 0.309718203022949 NA intron (NM_001362367, intron 2 of 27) intron (NM_001362367, intron 2 of 27) 3794 NM_001362367 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-17 chr3 123722255 123722498 + 0.309718203022949 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -31524 NR_121616 83398 Mm.443908 NM_031186 ENSMUSG00000027977 Ndst3 4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-4 chr12 110066765 110066994 + 0.309718203022949 NA Intergenic Intergenic 91194 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-6 chr13 98013499 98013768 + 0.309718203022949 NA intron (NM_012026, intron 9 of 35) intron (NM_012026, intron 9 of 35) 192532 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-6 chr10 77021050 77021345 + 0.309718203022949 NA intron (NR_152191, intron 1 of 3) intron (NR_152191, intron 1 of 3) 8378 NR_152191 100041099 Mm.426631 NR_152191 Gm3137 - predicted gene, 3137 ncRNA common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-13 chr7 80079081 80079327 + 0.309718203022949 NA intron (NM_175433, intron 1 of 4) intron (NM_175433, intron 1 of 4) -3947 NR_045695 100859962 Mm.392575 NR_045695 ENSMUSG00000108714 Gm21057 - predicted gene, 21057 ncRNA unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-11 chr4 156200928 156201259 + 0.309718203022949 NA promoter-TSS (NM_015783) promoter-TSS (NM_015783) -275 NM_015783 100038882 Mm.4950 NM_015783 ENSMUSG00000035692 Isg15 G1p2|IGI15|IP17|Irfp|UCRP ISG15 ubiquitin-like modifier protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-2 chr1 60410148 60410393 + 0.309718203022949 NA intron (NM_198127, intron 1 of 8) intron (NM_198127, intron 1 of 8) 651 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-6 chr15 8279530 8279807 + 0.309718203022949 NA Intergenic Intergenic 110562 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-8 chr18 44472228 44472457 + 0.309718203022949 NA intron (NM_001085373, intron 11 of 18) intron (NM_001085373, intron 11 of 18) 91842 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-2 chr10 93661002 93661279 + 0.309718203022949 NA intron (NM_021320, intron 2 of 9) intron (NM_021320, intron 2 of 9) 4714 NR_027478 667338 Mm.454582 NR_027478 Gm8580 EG667338 ribosomal protein L29 pseudogene pseudo common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-13 chr15 99359800 99360004 + 0.309718203022949 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 10580 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949 chr12 84408566 84408772 + 0.309718203022949 NA promoter-TSS (NM_028377) promoter-TSS (NM_028377) 360 NM_007647 12499 Mm.10211 NM_007647 ENSMUSG00000021236 Entpd5 AI196558|AI987697|Cd39l4|ER-UDPase|NTPDase-5|NTPDase5|Pcph|mNTPase ectonucleoside triphosphate diphosphohydrolase 5 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-4 chr13 30682929 30683138 + 0.309718203022949 NA intron (NM_134068, intron 3 of 7) intron (NM_134068, intron 3 of 7) 22974 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-6 chr19 16017054 16017324 + 0.309718203022949 NA Intergenic Intergenic 32114 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-16 chr7 105641198 105641425 + 0.309718203022949 NA promoter-TSS (NM_029802) promoter-TSS (NM_029802) 866 NM_001360054 14356 Mm.220330 NM_019502 ENSMUSG00000089847 Timm10b Fxc1|Tim10b|Tim9b translocase of inner mitochondrial membrane 10B protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-21 chr7 16412102 16412421 + 0.309718203022949 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 11065 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-3 chr11 4849037 4849291 + 0.309718203022949 NA 5' UTR (NM_001361676, exon 1 of 16) 5' UTR (NM_001361676, exon 1 of 16) 380 NM_001252250 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-7 chr15 38924584 38924791 + 0.309718203022949 NA Intergenic Intergenic -9222 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-19 chr7 82273875 82274119 + 0.309718203022949 NA intron (NM_001277954, intron 5 of 8) intron (NM_001277954, intron 5 of 8) -61697 NM_001190374 269959 Mm.65306 NM_001190374 ENSMUSG00000070469 Adamtsl3 9230119C12Rik|C130057K09|mKIAA1233 ADAMTS-like 3 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-15 chr6 88901771 88902031 + 0.309718203022949 NA promoter-TSS (NM_011906) promoter-TSS (NM_011906) -350 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-13 chr2 118668539 118668885 + 0.309718203022949 NA intron (NM_001033254, intron 2 of 10) intron (NM_001033254, intron 2 of 10) 5135 NM_001033254 214230 Mm.241857 NM_001033254 ENSMUSG00000074923 Pak6 4732456M09 p21 (RAC1) activated kinase 6 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-5 chr16 11708659 11708908 + 0.309718203022949 NA intron (NM_028964, intron 18 of 20) intron (NM_028964, intron 18 of 20) -70919 NR_126430 73761 Mm.39183 NR_126430 4833415N18Rik - RIKEN cDNA 4833415N18 gene ncRNA common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-6 chr13 5870655 5870863 + 0.309718203022949 NA TTS (NM_011803) TTS (NM_011803) 9270 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-18 chr4 11075861 11076119 + 0.309718203022949 NA exon (NM_001085493, exon 1 of 9) exon (NM_001085493, exon 1 of 9) 215 NM_001085493 76947 Mm.275265 NM_001085493 ENSMUSG00000050323 Ndufaf6 2310030N02Rik NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-10 chr8 3647074 3647279 + 0.309718203022949 NA Intergenic Intergenic -8594 NM_001204959 57264 Mm.1181 NM_022984 ENSMUSG00000012705 Retn ADSF|Fizz3|Rstn|Xcp4 resistin protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-14 chr18 12130016 12130336 + 0.309718203022949 NA intron (NM_024182, intron 1 of 12) intron (NM_024182, intron 1 of 12) 1326 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949 chr1 40529351 40529580 + 0.309718203022949 NA intron (NM_010553, intron 6 of 12) intron (NM_010553, intron 6 of 12) 14103 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-4 chr10 111583309 111583517 + 0.309718203022949 NA Intergenic Intergenic 10860 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-7 chr19 46483123 46483393 + 0.309718203022949 NA intron (NM_001025391, intron 10 of 11) intron (NM_001025391, intron 10 of 11) -18390 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-7 chr2 18050497 18050781 + 0.309718203022949 NA Intergenic Intergenic -2190 NM_028317 72668 Mm.102183 NM_028317 ENSMUSG00000054074 Skida1 2810030E01Rik|5730507N06Rik|BB088113|DLN-1 SKI/DACH domain containing 1 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-2 chr10 62299714 62300006 + 0.309718203022949 NA intron (NM_010438, intron 6 of 21) PB1D7|SINE|Alu 40561 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-11 chr2 117675167 117675613 + 0.309718203022949 NA Intergenic Intergenic 137412 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-9 chr3 151337811 151338145 + 0.309718203022949 NA Intergenic Intergenic -99904 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-12 chr3 117862527 117862817 + 0.309718203022949 NA intron (NM_001190156, intron 1 of 7) intron (NM_001190156, intron 1 of 7) 6264 NM_001190156 76561 Mm.33824 NM_029655 ENSMUSG00000028007 Snx7 2510028H01Rik sorting nexin 7 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-2 chr1 192742240 192742495 + 0.309718203022949 NA intron (NM_144881, intron 3 of 11) intron (NM_144881, intron 3 of 11) 28852 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949 chr1 138039241 138039542 + 0.309718203022949 NA Intergenic Intergenic 72752 NR_029820 723890 NR_029820 ENSMUSG00000065458 Mir181b-1 Mirn181b-1|mir-181b-1 microRNA 181b-1 ncRNA unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-3 chr2 93439599 93439795 + 0.309718203022949 NA intron (NM_001271431, intron 1 of 8) intron (NM_001271431, intron 1 of 8) 12975 NM_001271462 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-3 chr12 86241220 86241492 + 0.309718203022949 NA promoter-TSS (NM_001324488) promoter-TSS (NM_001324488) -502 NM_027405 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-13 chr4 145229606 145229906 + 0.309718203022949 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 17114 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-24 chrX 129750404 129750662 + 0.309718203022949 NA intron (NM_172493, intron 1 of 26) intron (NM_172493, intron 1 of 26) 791 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-11 chr6 114933902 114934123 + 0.309718203022949 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) -12191 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-3 chr13 70733452 70733761 + 0.309718203022949 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -95972 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-5 chr13 103387854 103388181 + 0.309718203022949 NA Intergenic Intergenic -53525 NM_175171 328329 Mm.202606 NM_175171 ENSMUSG00000034751 Mast4 4930420O11Rik|AI642422|mKIAA0303 microtubule associated serine/threonine kinase family member 4 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-19 chr5 149439757 149439996 + 0.309718203022949 NA intron (NM_001310765, intron 1 of 5) intron (NM_001310765, intron 1 of 5) 216 NM_001310765 75860 Mm.159605 NM_029464 ENSMUSG00000029660 Tex26 4930588N13Rik testis expressed 26 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-20 chr9 108461385 108461608 + 0.309718203022949 NA promoter-TSS (NM_030075) promoter-TSS (NM_030075) 85 NM_030075 78267 Mm.283194 NM_030075 ENSMUSG00000032609 Klhdc8b 4931406O17Rik kelch domain containing 8B protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-8 chr6 71830583 71830834 + 0.309718203022949 NA promoter-TSS (NM_001253681) promoter-TSS (NM_001253681) -612 NM_001362134 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-7 chr16 55789696 55789899 + 0.309718203022949 NA Intergenic Intergenic 32341 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-24 chr8 95138461 95138767 + 0.309718203022949 NA intron (NM_010631, intron 1 of 19) intron (NM_010631, intron 1 of 19) 3926 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-15 chr7 89667113 89667365 + 0.309718203022949 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 34421 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-17 chr8 31211794 31212016 + 0.309718203022949 NA intron (NM_001286425, intron 3 of 3) intron (NM_001286425, intron 3 of 3) 24574 NM_001286425 171167 Mm.334477 NM_134161 ENSMUSG00000046152 Fut10 fuc-TX|fut10A fucosyltransferase 10 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-6 chr2 167959041 167959425 + 0.309718203022949 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 26906 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-6 chr3 67464044 67464269 + 0.309718203022949 NA promoter-TSS (NM_016753) promoter-TSS (NM_016753) -249 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-15 chr3 90249312 90249635 + 0.309718203022949 NA intron (NM_013901, intron 3 of 3) intron (NM_013901, intron 3 of 3) 1281 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-12 chr2 31687666 31687900 + 0.309718203022949 NA promoter-TSS (NM_001283047) promoter-TSS (NM_001283047) 686 NR_153862 108168742 Mm.416860 NR_153862 Gm13427 - predicted gene 13427 ncRNA common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-13 chr6 72245099 72245448 + 0.309718203022949 NA Intergenic Intergenic -9696 NM_153778 71093 Mm.87449 NM_153778 ENSMUSG00000037621 Atoh8 4933425C05Rik|Hath6|Math6|bHLHa21|okadin atonal bHLH transcription factor 8 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-15 chr7 141442987 141443232 + 0.309718203022949 NA exon (NM_022654, exon 2 of 16) exon (NM_022654, exon 2 of 16) 916 NM_001360523 57913 Mm.334321 NM_022654 ENSMUSG00000025507 Pidd1 1200011D09Rik|AU042446|Lrdd|Pidd p53 induced death domain protein 1 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-11 chr2 180170643 180171019 + 0.309718203022949 NA promoter-TSS (NM_019822) promoter-TSS (NM_019822) -757 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-10 chr4 62968701 62969072 + 0.309718203022949 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 3312 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-7 chr11 79146303 79146515 + 0.309718203022949 NA promoter-TSS (NM_013571) promoter-TSS (NM_013571) 64 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb|mKSR1 kinase suppressor of ras 1 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-4 chr11 49093794 49093998 + 0.309718203022949 NA intron (NM_001271676, intron 2 of 2) intron (NM_001271676, intron 2 of 2) 6879 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-9 chr2 35431381 35431764 + 0.309718203022949 NA intron (NM_010283, intron 2 of 8) intron (NM_010283, intron 2 of 8) 29877 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-12 chr4 150068988 150069193 + 0.309718203022949 NA TTS (NR_029751) TTS (NR_029751) 636 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-15 chr2 154613792 154613994 + 0.309718203022949 NA intron (NM_199304, intron 1 of 14) CpG 525 NM_199304 228807 Mm.103555 NM_199304 ENSMUSG00000059842 Zfp341 Znf341 zinc finger protein 341 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-8 chr2 26352371 26352581 + 0.309718203022949 NA promoter-TSS (NM_001139504) promoter-TSS (NM_001139504) -366 NM_001139504 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-9 chr8 67727615 67727860 + 0.309718203022949 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 90558 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-14 chr8 70711291 70711549 + 0.309718203022949 NA Intergenic Intergenic -7123 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-11 chr3 121449841 121450187 + 0.309718203022949 NA exon (NM_028044, exon 2 of 7) exon (NM_028044, exon 2 of 7) 23473 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-11 chr17 84216070 84216342 + 0.309718203022949 NA intron (NM_183021, intron 36 of 37) intron (NM_183021, intron 36 of 37) -28259 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-5 chr19 10144334 10144542 + 0.309718203022949 NA Intergenic Intergenic -38450 NM_146094 76267 Mm.30158 NM_146094 ENSMUSG00000010663 Fads1 0710001O03Rik|A930006B21Rik|AI317215|DSD fatty acid desaturase 1 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-4 chr10 25359477 25359699 + 0.309718203022949 NA promoter-TSS (NM_001358755) promoter-TSS (NM_001358755) -210 NM_001358754 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-10 chr19 5956109 5956368 + 0.309718203022949 NA intron (NM_001164057, intron 4 of 17) intron (NM_001164057, intron 4 of 17) 7968 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-12 chr4 136836072 136836259 + 0.309718203022949 NA promoter-TSS (NM_001290753) promoter-TSS (NM_001290753) -153 NM_010142 13844 Mm.250981 NM_010142 ENSMUSG00000028664 Ephb2 Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5 Eph receptor B2 protein-coding unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-2 chr17 65628900 65629099 + 0.309718203022949 NA Intergenic Intergenic 10757 NM_153519 213272 Mm.255732 NM_153519 ENSMUSG00000050612 Txndc2 AU021712|Sptrx-1|Sptrx1|Trx4 thioredoxin domain containing 2 (spermatozoa) protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-13 chr7 135604881 135605092 + 0.309718203022949 NA promoter-TSS (NM_001316679) promoter-TSS (NM_001316679) -842 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-5 chr13 51310009 51310292 + 0.309718203022949 NA Intergenic Intergenic -98468 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-3 chr11 118345741 118346122 + 0.309718203022949 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) -3397 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 Cep295nl Ddc8|FS39|Kiaa1731nl CEP295 N-terminal like protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-14 chr5 143910232 143910457 + 0.309718203022949 NA promoter-TSS (NM_146165) promoter-TSS (NM_146165) 343 NM_008886 18861 Mm.2950 NM_008886 ENSMUSG00000075569 Pms2 AW555130|Pmsl2 PMS1 homolog2, mismatch repair system component protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-15 chr6 91527788 91528063 + 0.309718203022949 NA Intergenic Intergenic 11890 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-16 chr4 95557055 95557312 + 0.309718203022949 NA promoter-TSS (NM_001113412) promoter-TSS (NM_001113412) -324 NM_001113412 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-14 chr5 30887649 30887848 + 0.309718203022949 NA Intergenic CpG -1104 NM_174849 231093 Mm.440364 NM_174849 ENSMUSG00000029165 Agbl5 9430057O19Rik|CCP5 ATP/GTP binding protein-like 5 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-3 chr11 50024927 50025172 + 0.309718203022949 NA promoter-TSS (NM_001290749) promoter-TSS (NM_001290749) -282 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-10 chr4 58203327 58203611 + 0.309718203022949 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 3127 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949 chr1 58677313 58677607 + 0.309718203022949 NA intron (NM_001347056, intron 5 of 13) intron (NM_001347056, intron 5 of 13) 14985 NM_001347056 108812 Mm.442063 NM_175370 ENSMUSG00000047528 Als2cr12 4933405P16Rik|4933425F06Rik amyotrophic lateral sclerosis 2 chromosome region 12 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-8 chr3 65265619 65265876 + 0.309718203022949 NA intron (NR_126080, intron 2 of 4) intron (NR_126080, intron 2 of 4) 36938 NR_126080 102637797 Mm.446731 NR_126080 ENSMUSG00000104093 A330015K06Rik - RIKEN cDNA A330015K06 gene ncRNA common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-5 chr11 67052879 67053088 + 0.309718203022949 NA promoter-TSS (NM_025510) promoter-TSS (NM_025510) 313 NM_001040026 52892 Mm.129731 NM_001040026 ENSMUSG00000069844 Sco1 2610001C07Rik|D11Bwg1310e SCO1 cytochrome c oxidase assembly protein protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-7 chr3 84346374 84346800 + 0.309718203022949 NA Intergenic Intergenic 33334 NR_040752 75309 Mm.159497 NR_040752 ENSMUSG00000104004 4930565D16Rik - RIKEN cDNA 4930565D16 gene ncRNA common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-13 chr4 62638126 62638370 + 0.309718203022949 NA intron (NM_019492, intron 16 of 19) intron (NM_019492, intron 16 of 19) 18576 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-15 chr7 131411021 131411460 + 0.309718203022949 NA promoter-TSS (NM_175115) promoter-TSS (NM_175115) 639 NM_025826 66885 Mm.334274 NM_025826 ENSMUSG00000030861 Acadsb 1300003O09Rik|2-MEBCAD|BB066609|SBCAD acyl-Coenzyme A dehydrogenase, short/branched chain protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-17 chr7 63925513 63925731 + 0.309718203022949 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 8765 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-22 chr7 109616980 109617183 + 0.309718203022949 NA promoter-TSS (NR_037617) promoter-TSS (NR_037617) 66 NM_001001326 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-11 chr4 107522259 107522486 + 0.309718203022949 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 87653 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-12 chr5 3538966 3539297 + 0.309718203022949 NA Intergenic Intergenic -4702 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-14 chr7 81454536 81454755 + 0.309718203022949 NA exon (NM_007755, exon 1 of 12) exon (NM_007755, exon 1 of 12) 113 NM_001252525 12877 Mm.273122 NM_007755 ENSMUSG00000025586 Cpeb1 AU024112|Cpe-bp1|Cpeb|mCPEB|mCpeb-1 cytoplasmic polyadenylation element binding protein 1 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-21 chr6 91533613 91533866 + 0.309718203022949 NA Intergenic Intergenic 17704 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-12 chr13 98534546 98534896 + 0.309718203022949 NA Intergenic RMER30|DNA|hAT-Charlie -99656 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA unique_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-7 chr15 56845274 56845516 + 0.309718203022949 NA Intergenic Intergenic -150849 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-2 chr1 150146510 150146794 + 0.309718203022949 NA Intergenic Intergenic 18296 NR_110420 102639566 Mm.417208 NR_110420 ENSMUSG00000097754 Ptgs2os2 Gm26687|Linc-cox2|Lincrna-cox2 prostaglandin-endoperoxide synthase 2, opposite strand 2 ncRNA common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-16 chr6 146846671 146846888 + 0.309718203022949 NA Intergenic Intergenic -3331 NM_027059 69371 Mm.252733 NM_027059 ENSMUSG00000030292 Smco2 1700023A16Rik single-pass membrane protein with coiled-coil domains 2 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-4 chr14 55745290 55745561 + 0.309718203022949 NA promoter-TSS (NM_026403) promoter-TSS (NM_026403) 259 NM_026819 52585 Mm.21623 NM_026819 ENSMUSG00000002332 Dhrs1 1110029G07Rik|AW112170|D14Ertd484e dehydrogenase/reductase (SDR family) member 1 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-19 chr5 72809597 72809785 + 0.309718203022949 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -56914 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-7 chr13 112778365 112778561 + 0.309718203022949 NA Intergenic Intergenic -22314 NM_008903 19012 Mm.291029 NM_008247 ENSMUSG00000021759 Plpp1 Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP phospholipid phosphatase 1 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-10 chr17 70794058 70794346 + 0.309718203022949 NA intron (NM_001347413, intron 8 of 10) intron (NM_001347413, intron 8 of 10) 52575 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-3 chr15 85539529 85539790 + 0.309718203022949 NA intron (NM_009528, intron 3 of 3) intron (NM_009528, intron 3 of 3) -36432 NM_001256072 328577 Mm.212960 NM_001256072 ENSMUSG00000096607 7530416G11Rik - RIKEN cDNA 7530416G11 gene protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-8 chr15 55072483 55072670 + 0.309718203022949 NA promoter-TSS (NM_001081288) promoter-TSS (NM_001081288) -424 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-8 chr19 18759343 18759568 + 0.309718203022949 NA intron (NM_153417, intron 1 of 38) B4A|SINE|B4 9472 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-17 chr4 100247599 100247908 + 0.309718203022949 NA intron (NM_013845, intron 1 of 8) intron (NM_013845, intron 1 of 8) 151962 NM_001312690 26563 Mm.57252 NM_013845 ENSMUSG00000035305 Ror1 2810404D04Rik|Ntrkr1 receptor tyrosine kinase-like orphan receptor 1 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-15 chr9 107724463 107724758 + 0.309718203022949 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -14135 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-6 chr4 116150166 116150369 + 0.309718203022949 NA promoter-TSS (NM_026651) promoter-TSS (NM_026651) -251 NM_029786 68273 Mm.196045 NM_026651 ENSMUSG00000028700 Pomgnt1 0610016I07Rik|4930467B06Rik protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-11 chr4 126047323 126047544 + 0.309718203022949 NA intron (NM_025544, intron 1 of 7) intron (NM_025544, intron 1 of 7) 505 NM_025544 66407 Mm.195628 NM_025544 ENSMUSG00000028861 Mrps15 1500003E24Rik|2410002B11Rik|Mprs15 mitochondrial ribosomal protein S15 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949 chr1 132310613 132310807 + 0.309718203022949 NA Intergenic Intergenic -5415 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-4 chr14 20082828 20083057 + 0.309718203022949 NA exon (NM_026209, exon 1 of 2) exon (NM_026209, exon 1 of 2) 230 NM_026209 67509 Mm.292423 NM_026209 ENSMUSG00000045107 Saysd1 1810063B07Rik|4930488P03Rik SAYSVFN motif domain containing 1 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-2 chr10 17010700 17010916 + 0.309718203022949 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 84974 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-3 chr10 95123528 95123785 + 0.309718203022949 NA intron (NR_131146, intron 3 of 3) intron (NR_131146, intron 3 of 3) 22169 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-12 chr5 22549960 22550224 + 0.309718203022949 NA promoter-TSS (NR_102315) promoter-TSS (NR_102315) 239 NM_011959 26429 Mm.412217 NM_011959 ENSMUSG00000029012 Orc5 AL033327|MmORC5|Orc5l origin recognition complex, subunit 5 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949 chr1 131241843 131242072 + 0.309718203022949 NA intron (NM_018750, intron 1 of 5) intron (NM_018750, intron 1 of 5) 3221 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-9 chr17 28313609 28313823 + 0.309718203022949 NA exon (NM_001163820, exon 1 of 9) exon (NM_001163820, exon 1 of 9) 186 NM_001163820 72775 Mm.201859 NM_028348 ENSMUSG00000007570 Fance 2810451D06Rik|AI415634|AW209126 Fanconi anemia, complementation group E protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-10 chr4 63057197 63057420 + 0.309718203022949 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 91734 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-18 chr5 53543904 53544119 + 0.309718203022949 NA Intergenic Intergenic -11768 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-16 chr8 126679430 126679813 + 0.309718203022949 NA Intergenic Intergenic -86185 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-16 chr9 120776392 120776602 + 0.309718203022949 NA Intergenic Intergenic 138753 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-4 chr2 131760936 131761144 + 0.309718203022949 NA Intergenic Intergenic 86616 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-25 chrX 142901880 142902103 + 0.309718203022949 NA intron (NM_019496, intron 2 of 5) intron (NM_019496, intron 2 of 5) 64737 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-14 chrX 95444503 95444705 + 0.309718203022949 NA intron (NM_175179, intron 1 of 1) intron (NM_175179, intron 1 of 1) 236 NM_175179 72345 Mm.182867 NM_175179 ENSMUSG00000050332 Amer1 2810002O09Rik|AW492303|Fam123b|Wtx APC membrane recruitment 1 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949 chr1 133801210 133801411 + 0.309718203022949 NA Intergenic Intergenic -47563 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-14 chr5 135888648 135888947 + 0.309718203022949 NA intron (NM_013560, intron 1 of 2) intron (NM_013560, intron 1 of 2) 878 NM_013560 15507 Mm.13849 NM_013560 ENSMUSG00000004951 Hspb1 27kDa|Hsp25 heat shock protein 1 protein-coding common_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-15 chr7 28587034 28587273 + 0.309718203022949 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 11031 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-18 chr9 48984513 48984894 + 0.309718203022949 NA promoter-TSS (NM_175482) promoter-TSS (NM_175482) -682 NM_001359739 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-9 chr7 110123054 110123346 + 0.309718203022949 NA intron (NM_009516, intron 1 of 10) intron (NM_009516, intron 1 of 10) 1141 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-6 chr15 50697762 50698154 + 0.309718203022949 NA intron (NM_001310481, intron 4 of 5) intron (NM_001310481, intron 4 of 5) 191091 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e transcriptional repressor GATA binding 1 protein-coding common_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-5 chr11 116199386 116199574 + 0.309718203022949 NA promoter-TSS (NM_015729) promoter-TSS (NM_015729) -435 NM_015729 11430 Mm.356689 NM_015729 ENSMUSG00000020777 Acox1 AOX|Acox|D130055E20Rik|Paox acyl-Coenzyme A oxidase 1, palmitoyl protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-7 chr18 34953202 34953429 + 0.309718203022949 NA intron (NM_010481, intron 1 of 16) PB1D9|SINE|Alu 1036 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-6 chr19 38396045 38396318 + 0.309718203022949 NA exon (NM_175507, exon 1 of 3) exon (NM_175507, exon 1 of 3) 201 NM_175507 240660 Mm.262085 NM_175507 ENSMUSG00000044026 Slc35g1 AA590464|D330039I19Rik|Tmem20 solute carrier family 35, member G1 protein-coding unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-7 chr6 38143733 38143991 + 0.309718203022949 NA intron (NM_194061, intron 15 of 19) intron (NM_194061, intron 15 of 19) -19276 NM_080467 140494 Mm.462308 NM_080467 ENSMUSG00000038600 Atp6v0a4 Atp6n1b|a4 ATPase, H+ transporting, lysosomal V0 subunit A4 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-12 chr6 125131511 125131767 + 0.309718203022949 NA promoter-TSS (NM_138747) promoter-TSS (NM_138747) -244 NM_138747 110109 Mm.29203 NM_138747 ENSMUSG00000038279 Nop2 120kDa|A530002O17|Nol1 NOP2 nucleolar protein protein-coding common_peak1_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-11 chr8 94307845 94308071 + 0.309718203022949 NA intron (NM_001357268, intron 15 of 20) intron (NM_001357268, intron 15 of 20) -16353 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-23 chr8 23166976 23167229 + 0.309718203022949 NA Intergenic Intergenic 13831 NM_029002 74561 Mm.290028 NM_029002 ENSMUSG00000063672 Nkx6-3 9130417I07Rik|Nkx6.3 NK6 homeobox 3 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-13 chr5 139371987 139372236 + 0.309718203022949 NA intron (NM_028469, intron 2 of 4) CpG -2366 NR_029768 723898 NR_029768 ENSMUSG00000065593 Mir339 Mirn339|mir-339|mmu-mir-339 microRNA 339 ncRNA unique_peak1_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-10 chrX 74297310 74297543 + 0.309718203022949 NA intron (NM_001358380, intron 1 of 9) intron (NM_001358380, intron 1 of 9) 329 NM_018794 54411 Mm.21961 NM_018794 ENSMUSG00000019087 Atp6ap1 16A|AC45|AI316502|AW108110|Atp6ip1|Atp6s1|C7-1|CF2|VATPS1|XAP-3|mFLJ00383 ATPase, H+ transporting, lysosomal accessory protein 1 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-5 chr10 120624056 120624332 + 0.309718203022949 NA Intergenic Intergenic -141538 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-13 chr5 122372670 122372937 + 0.309718203022949 NA promoter-TSS (NM_026883) promoter-TSS (NM_026883) 295 NM_024216 68080 Mm.266328 NM_024216 ENSMUSG00000029464 Gpn3 A930018B01Rik|Atpbd1c|D5Ertd708e GPN-loop GTPase 3 protein-coding unique_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-9 chr4 8200324 8200592 + 0.309718203022949 NA intron (NM_007592, intron 3 of 8) intron (NM_007592, intron 3 of 8) 38583 NM_007592 12319 Mm.119320 NM_007592 ENSMUSG00000041261 Car8 AW546993|Ca8|Cals|Cals1|Carp|wdl carbonic anhydrase 8 protein-coding unique_peak1_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-16 chr3 96813771 96813992 + 0.309718203022949 NA intron (NM_001163497, intron 1 of 3) intron (NM_001163497, intron 1 of 3) 640 NM_018767 54215 Mm.34693 NM_018767 ENSMUSG00000038304 Cd160 AU045688|By55 CD160 antigen protein-coding unique_peak2_14_13_-0.169767397285231_3.72247122341499_0.309718203022949-4 chr18 68016166 68016414 + 0.309718203022949 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 83117 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-20 chr5 151108439 151108704 + 0.309718203022949 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 81622 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_15_12_0.0296003260767037_3.71523988117944_0.309718203022949-6 chr17 84626886 84627096 + 0.309718203022949 NA intron (NM_172256, intron 1 of 12) intron (NM_172256, intron 1 of 12) 492 NM_172256 213575 Mm.246119 NM_172256 ENSMUSG00000024253 Dync2li1 4933404O11Rik|CGI-60|D2lic|LIC3|mD2LIC dynein cytoplasmic 2 light intermediate chain 1 protein-coding common_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-10 chr13 43560542 43560820 + 0.309718203022949 NA promoter-TSS (NM_001081059) promoter-TSS (NM_001081059) -490 NM_001081059 76137 Mm.426290 NM_001081059 ENSMUSG00000021371 Mcur1 6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a mitochondrial calcium uniporter regulator 1 protein-coding unique_peak2_13_13_-0.268600848692435_3.67305449771139_0.309718203022949-16 chr9 40455654 40455987 + 0.309718203022949 NA promoter-TSS (NM_172768) promoter-TSS (NM_172768) -56 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-6 chr2 137654943 137655329 + 0.309716464454027 NA Intergenic Intergenic -538616 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_61_49_0.0265933497780573_5.65715286466375_0.309716464454027-3 chr7 25317044 25317765 + 0.309716464454027 NA 5' UTR (NM_001160400, exon 1 of 41) 5' UTR (NM_001160400, exon 1 of 41) 240 NM_001160400 269878 Mm.38527 NM_001160400 ENSMUSG00000045039 Megf8 AW049492|Egfl4|b2b1702.2Clo|b2b1702Clo|b2b288Clo|m687Ddg|mKIAA0817 multiple EGF-like-domains 8 protein-coding common_peak1_61_49_0.0265933497780573_5.65715286466375_0.309716464454027 chr12 27341948 27342516 + 0.309716464454027 NA exon (NM_009234, exon 1 of 1) exon (NM_009234, exon 1 of 1) 486 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027 chr11 43545980 43546755 + 0.309716464454027 NA intron (NM_001045530, intron 2 of 5) intron (NM_001045530, intron 2 of 5) 17618 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding common_peak1_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-2 chr16 24912856 24913829 + 0.309716464454027 NA intron (NM_178665, intron 10 of 12) intron (NM_178665, intron 10 of 12) -146297 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_61_49_0.0265933497780573_5.65715286466375_0.309716464454027-2 chr6 91476507 91477508 + 0.309716464454027 NA intron (NM_028766, intron 1 of 11) intron (NM_028766, intron 1 of 11) 3256 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak2_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027 chr11 69681168 69681902 + 0.309716464454027 NA intron (NM_001163571, intron 1 of 10) CpG 435 NM_030702 80886 Mm.284592 NM_030702 ENSMUSG00000005204 Senp3 AA408656|Smt3ip|Smt3ip1 SUMO/sentrin specific peptidase 3 protein-coding common_peak2_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-2 chr12 4817204 4817965 + 0.309716464454027 NA promoter-TSS (NM_025323) promoter-TSS (NM_025323) -24 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak2_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-5 chr17 5741360 5741775 + 0.309716464454027 NA intron (NM_146073, intron 8 of 8) intron (NM_146073, intron 8 of 8) -57090 NR_045081 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak1_61_49_0.0265933497780573_5.65715286466375_0.309716464454027-2 chr6 114894135 114894855 + 0.309716464454027 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 27326 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_61_49_0.0265933497780573_5.65715286466375_0.309716464454027 chr11 40694049 40695085 + 0.309716464454027 NA intron (NM_001199274, intron 1 of 6) intron (NM_001199274, intron 1 of 6) 636 NM_001199274 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-4 chr7 15922002 15922580 + 0.309716464454027 NA promoter-TSS (NM_009156) promoter-TSS (NM_009156) 80 NM_009156 20364 Mm.42829 NM_009156 ENSMUSG00000041571 Selenow Sepw1|selW selenoprotein W protein-coding common_peak2_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-3 chr12 111455140 111456007 + 0.309716464454027 NA TTS (NM_009396) TTS (NM_009396) 12912 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-3 chr5 127616892 127617346 + 0.309716464454027 NA exon (NM_133895, exon 1 of 8) exon (NM_133895, exon 1 of 8) 273 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak2_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-4 chr16 20717311 20718220 + 0.309716464454027 NA promoter-TSS (NM_145632) promoter-TSS (NM_145632) -61 NM_145632 245841 Mm.288730 NM_145632 ENSMUSG00000021018 Polr2h - polymerase (RNA) II (DNA directed) polypeptide H protein-coding common_peak1_59_51_-0.0769621525152067_5.66195864188349_0.309716464454027-5 chr8 111144860 111145501 + 0.309716464454027 NA intron (NR_040363, intron 1 of 3) GC_rich|Low_complexity|Low_complexity 318 NR_040363 434350 Mm.442061 NR_040363 9430091E24Rik - RIKEN cDNA 9430091E24 gene ncRNA common_peak1_138_111_0.0196221293254828_6.81716598672035_0.309716142680059 chr7 105736700 105738174 + 0.309716142680059 NA promoter-TSS (NM_025897) promoter-TSS (NM_025897) -52 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak2_139_111_0.029891111341712_6.82230047772846_0.309716142680059 chr8 109564831 109565668 + 0.309716142680059 NA promoter-TSS (NM_175646) promoter-TSS (NM_175646) 612 NR_151644 64340 Mm.23705 NM_178380 ENSMUSG00000037993 Dhx38 5730550P09Rik|AI325984|AW540902|Ddx38|KIAA0224|Prp16 DEAH (Asp-Glu-Ala-His) box polypeptide 38 protein-coding common_peak1_140_112_0.0272629635410775_6.83381044418573_0.309639608274445 chr1 131910614 131912049 + 0.309639608274445 NA intron (NM_001145804, intron 1 of 6) intron (NM_001145804, intron 1 of 6) 873 NM_175294 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding common_peak2_140_112_0.0272629635410775_6.83381044418573_0.309639608274445-2 chr17 53479276 53480084 + 0.309639608274445 NA intron (NM_025887, intron 1 of 5) CpG 446 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak2_140_112_0.0272629635410775_6.83381044418573_0.309639608274445 chr13 107328414 107329936 + 0.309639608274445 NA Intergenic Intergenic -140647 NR_045083 105120 Mm.417700 NR_045083 ENSMUSG00000114780 AI197445 - expressed sequence AI197445 ncRNA common_peak1_60_52_-0.0807643852603226_5.68753826193304_0.309546119485002-2 chr11 40754801 40755244 + 0.309546119485002 NA 5' UTR (NM_009831, exon 1 of 6) 5' UTR (NM_009831, exon 1 of 6) 264 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding common_peak1_60_52_-0.0807643852603226_5.68753826193304_0.309546119485002-3 chr14 20893498 20894078 + 0.309546119485002 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -35610 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_60_52_-0.0807643852603226_5.68753826193304_0.309546119485002 chr1 150393464 150394331 + 0.309546119485002 NA promoter-TSS (NM_145511) promoter-TSS (NM_145511) -817 NM_001357579 226499 Mm.222093 NM_145511 ENSMUSG00000006010 BC003331 1810053E15Rik|Odr4|odr-4 cDNA sequence BC003331 protein-coding common_peak1_60_52_-0.0807643852603226_5.68753826193304_0.309546119485002-4 chr7 112467548 112468198 + 0.309546119485002 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 40167 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak2_62_50_0.020944956275339_5.68289782010917_0.309546119484978 chr17 15526790 15527882 + 0.309546119484978 NA promoter-TSS (NM_008799) promoter-TSS (NM_008799) -35 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding common_peak1_62_50_0.020944956275339_5.68289782010917_0.309546119484978 chr4 40269049 40269846 + 0.309546119484978 NA promoter-TSS (NM_001349093) promoter-TSS (NM_001349093) -132 NM_001349093 100504309 Mm.392019 NM_001349093 Smim27 2010003O02Rik|Toporsos small integral membrane protein 27 protein-coding common_peak2_62_50_0.020944956275339_5.68289782010917_0.309546119484978-2 chr6 114894085 114894813 + 0.309546119484978 NA intron (NM_001356371, intron 2 of 5) intron (NM_001356371, intron 2 of 5) 27372 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_62_50_0.020944956275339_5.68289782010917_0.309546119484978-3 chr9 66918814 66919596 + 0.309546119484978 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 500 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_62_50_0.020944956275339_5.68289782010917_0.309546119484978-2 chr6 122339299 122340340 + 0.309546119484978 NA promoter-TSS (NR_073364) promoter-TSS (NR_073364) -162 NR_073364 13619 Mm.6822 NM_007905 ENSMUSG00000040669 Phc1 AW557034|Edr|Edr1|Mph1|Rae-28|rae28 polyhomeotic 1 protein-coding common_peak1_253_203_0.0181593000291773_7.68150499198608_0.309504168768715 chr10 99263283 99265423 + 0.309504168768715 NA intron (NM_026268, intron 1 of 2) intron (NM_026268, intron 1 of 2) 1122 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_142_114_0.0221285023167583_6.85655430210275_0.309490515617135-2 chr9 75408233 75410002 + 0.309490515617135 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 242 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak1_142_114_0.0221285023167583_6.85655430210275_0.309490515617135 chr2 30717728 30719308 + 0.309490515617135 NA Intergenic Intergenic -2692 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_139_117_-0.0453970159625259_6.85994454138058_0.309490515617135 chr7 126502676 126503637 + 0.309490515617135 NA promoter-TSS (NM_001347658) promoter-TSS (NM_001347658) 281 NM_001361487 233871 Mm.231450 NM_183020 ENSMUSG00000032637 Atxn2l A2D|A2LG|A2RP|A2lp|Atxnl2 ataxin 2-like protein-coding common_peak1_138_117_-0.055665997978755_6.85481005037246_0.309490515617135 chr6 50381880 50383312 + 0.309490515617135 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 241 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_140_118_-0.0473758373516784_6.8711298446321_0.309417889097435 chr11 75463228 75464082 + 0.309417889097435 NA promoter-TSS (NR_029739) promoter-TSS (NR_029739) -61 NR_029739 387141 NR_029739 ENSMUSG00000065529 Mir22 Mirn22|mmu-mir-22 microRNA 22 ncRNA common_peak1_143_115_0.0196202943986448_6.86779114232689_0.309417889097435 chr11 35970754 35972348 + 0.309417889097435 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 8538 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_143_115_0.0196202943986448_6.86779114232689_0.309417889097435 chr7 25753641 25754809 + 0.309417889097435 NA intron (NM_001360789, intron 1 of 14) intron (NM_001360789, intron 1 of 14) 534 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak1_63_51_0.0154903669302158_5.7081849016062_0.30938232748146-4 chr17 15041074 15041530 + 0.30938232748146 NA promoter-TSS (NM_001039552) promoter-TSS (NM_001039552) -249 NM_001360402 381062 Mm.393767 NM_183133 ENSMUSG00000036552 Ermard 2210404J11Rik|2410011O22Rik|AI448938 ER membrane associated RNA degradation protein-coding common_peak2_64_51_0.0377003754946559_5.71928990588842_0.30938232748146 chr2 117542673 117543450 + 0.30938232748146 NA Intergenic Intergenic -200184 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_63_51_0.0154903669302158_5.7081849016062_0.30938232748146-2 chr12 59130414 59131313 + 0.30938232748146 NA promoter-TSS (NM_001165253) promoter-TSS (NM_001165253) -590 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak2_64_51_0.0377003754946559_5.71928990588842_0.30938232748146-3 chr5 136962189 136962757 + 0.30938232748146 NA intron (NM_025562, intron 1 of 4) intron (NM_025562, intron 1 of 4) 396 NM_025562 66437 Mm.25849 NM_025562 ENSMUSG00000019054 Fis1 2010003O14Rik|Ttc11 fission, mitochondrial 1 protein-coding common_peak1_63_51_0.0154903669302158_5.7081849016062_0.30938232748146-3 chr13 101767017 101767820 + 0.30938232748146 NA intron (NM_001077495, intron 1 of 15) CpG 799 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak1_64_51_0.0377003754946559_5.71928990588842_0.30938232748146 chr5 3928012 3928846 + 0.30938232748146 NA 5' UTR (NM_194462, exon 1 of 48) 5' UTR (NM_194462, exon 1 of 48) 243 NM_194462 100986 Mm.46044 NM_194462 ENSMUSG00000040407 Akap9 5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12 A kinase (PRKA) anchor protein (yotiao) 9 protein-coding common_peak2_64_51_0.0377003754946559_5.71928990588842_0.30938232748146-2 chr5 134439708 134440242 + 0.30938232748146 NA intron (NM_001081462, intron 1 of 29) intron (NM_001081462, intron 1 of 29) 16287 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_63_51_0.0154903669302158_5.7081849016062_0.30938232748146 chr11 60417640 60418639 + 0.30938232748146 NA intron (NM_025757, intron 1 of 5) intron (NM_025757, intron 1 of 5) 994 NM_025757 66771 Mm.29950 NM_025757 ENSMUSG00000018415 Gid4 4933439F18Rik GID complex subunit 4, VID24 homolog protein-coding common_peak2_63_51_0.0154903669302158_5.7081849016062_0.30938232748146-3 chr6 149101168 149101907 + 0.30938232748146 NA 5' UTR (NM_177192, exon 1 of 21) 5' UTR (NM_177192, exon 1 of 21) 143 NM_177192 320560 Mm.426874 NM_177192 ENSMUSG00000030313 Dennd5b 9330160C06Rik|AI852444|D030011O10Rik|Gm17524 DENN/MADD domain containing 5B protein-coding common_peak2_63_51_0.0154903669302158_5.7081849016062_0.30938232748146-2 chr15 89211596 89212156 + 0.30938232748146 NA intron (NM_026813, intron 1 of 24) CpG 317 NM_027805 71474 Mm.184055 NM_026813 ENSMUSG00000036561 Ppp6r2 1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2 protein phosphatase 6, regulatory subunit 2 protein-coding common_peak1_63_51_0.0154903669302158_5.7081849016062_0.30938232748146-5 chr7 141562809 141563687 + 0.30938232748146 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 1068 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_63_51_0.0154903669302158_5.7081849016062_0.30938232748146 chr11 120467696 120468376 + 0.30938232748146 NA promoter-TSS (NM_197995) promoter-TSS (NM_197995) 401 NM_001159328 15239 Mm.7919 NM_008244 ENSMUSG00000025793 Hgs Hgr|Hrs|ZFYVE8|tn HGF-regulated tyrosine kinase substrate protein-coding common_peak1_61_53_-0.0844379626106866_5.71266852085813_0.309382327481447 chr12 80216292 80217359 + 0.309382327481447 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 43546 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_61_53_-0.0844379626106866_5.71266852085813_0.309382327481447-2 chr14 43344486 43345173 + 0.309382327481447 NA intron (NM_027940, intron 3 of 4) intron (NM_027940, intron 3 of 4) 2982 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_61_53_-0.0844379626106866_5.71266852085813_0.309382327481447-3 chr7 84363084 84363909 + 0.309382327481447 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 46542 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_61_53_-0.0844379626106866_5.71266852085813_0.309382327481447 chr15 38937265 38937771 + 0.309382327481447 NA intron (NM_080640, intron 1 of 1) intron (NM_080640, intron 1 of 1) 3609 NM_080640 118452 Mm.233837 NM_080640 ENSMUSG00000022296 Baalc 2810457D07Rik brain and acute leukemia, cytoplasmic protein-coding common_peak1_145_116_0.0269957364092779_6.88386258778804_0.309346498875258 chr16 32078250 32079390 + 0.309346498875258 NA intron (NM_177326, intron 1 of 14) CpG 522 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding common_peak2_142_120_-0.0512446840134615_6.89324089526786_0.309276313648738 chr15 25396586 25398113 + 0.309276313648738 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 16415 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_142_120_-0.0512446840134615_6.89324089526786_0.309276313648738 chr7 100931213 100932547 + 0.309276313648738 NA 5' UTR (NM_001081116, exon 1 of 21) 5' UTR (NM_001081116, exon 1 of 21) 281 NM_001081116 207212 Mm.29954 NM_001081116 ENSMUSG00000032875 Arhgef17 8030463K16|AI428794|AW558066|BC035332|mKIAA0337 Rho guanine nucleotide exchange factor (GEF) 17 protein-coding common_peak1_142_120_-0.0512446840134615_6.89324089526786_0.309276313648738-2 chr7 134261681 134262750 + 0.309276313648738 NA Intergenic Intergenic -37118 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak1_65_52_0.0320905502613158_5.74396572969386_0.309224717430222 chr4 108620010 108620748 + 0.309224717430222 NA intron (NM_177045, intron 1 of 24) CpG 423 NM_177045 319965 Mm.151129 NM_177045 ENSMUSG00000028582 Cc2d1b A830039B04Rik|Freud2 coiled-coil and C2 domain containing 1B protein-coding common_peak2_65_52_0.0320905502613158_5.74396572969386_0.309224717430222 chr9 41950792 41951492 + 0.309224717430222 NA Intergenic Intergenic 126071 NM_001357261 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-3 chr17 27037744 27038310 + 0.30922471743021 NA Intergenic Intergenic 8768 NM_027544 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-4 chr2 71545016 71545726 + 0.30922471743021 NA intron (NM_010054, intron 2 of 2) CpG 1383 NM_010054 13392 Mm.3896 NM_010054 ENSMUSG00000023391 Dlx2 AW121999|Dlx-2|Tes-1 distal-less homeobox 2 protein-coding common_peak2_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021 chr12 70712761 70713641 + 0.30922471743021 NA Intergenic Intergenic -112313 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-3 chr17 15497649 15498268 + 0.30922471743021 NA intron (NM_011185, intron 1 of 5) intron (NM_011185, intron 1 of 5) 318 NM_011185 19170 Mm.32912 NM_011185 ENSMUSG00000014769 Psmb1 AA409053|C81484|Lmpc5 proteasome (prosome, macropain) subunit, beta type 1 protein-coding common_peak1_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021 chr14 18238607 18239034 + 0.30922471743021 NA exon (NM_011584, exon 1 of 8) exon (NM_011584, exon 1 of 8) 286 NM_011584 353187 Mm.26587 NM_011584 ENSMUSG00000021775 Nr1d2 RVR|Rev-erb nuclear receptor subfamily 1, group D, member 2 protein-coding common_peak2_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-2 chr13 98819458 98820214 + 0.30922471743021 NA Intergenic Intergenic -4387 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak1_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-4 chr7 141172462 141173444 + 0.30922471743021 NA promoter-TSS (NM_001172100) promoter-TSS (NM_001172100) -102 NM_001172100 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak1_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-2 chr16 64770434 64771164 + 0.30922471743021 NA exon (NM_026273, exon 1 of 3) exon (NM_026273, exon 1 of 3) 140 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak2_62_54_-0.0879894152778258_5.73736500588575_0.30922471743021-5 chr4 141309617 141310410 + 0.30922471743021 NA intron (NM_010139, intron 3 of 16) MIR3|SINE|MIR 8792 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_143_121_-0.05313604803667_6.90416931354455_0.309207303163826 chr7 92668644 92669910 + 0.309207303163826 NA intron (NM_029078, intron 1 of 15) CpG 635 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding common_peak2_143_121_-0.05313604803667_6.90416931354455_0.309207303163826 chr7 134261698 134262769 + 0.309207303163826 NA Intergenic Intergenic -37136 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak2_147_118_0.0220330186030102_6.90583427260945_0.309207303163826 chr11 60932136 60933515 + 0.309207303163826 NA promoter-TSS (NR_027800) promoter-TSS (NR_027800) 768 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak2_148_119_0.0196068009167476_6.91669399606689_0.309139438170586 chr10 59879073 59880470 + 0.309139438170586 NA exon (NM_019965, exon 1 of 9) exon (NM_019965, exon 1 of 9) 180 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_148_119_0.0196068009167476_6.91669399606689_0.309139438170586-2 chr5 110978903 110981060 + 0.309139438170586 NA intron (NM_001267622, intron 2 of 22) intron (NM_001267622, intron 2 of 22) -24163 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA common_peak2_149_119_0.0291888891980001_6.92148504020752_0.309139438170586-2 chr8 54610711 54611714 + 0.309139438170586 NA Intergenic Intergenic 10431 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding common_peak2_149_119_0.0291888891980001_6.92148504020752_0.309139438170586 chr3 90247682 90249085 + 0.309139438170586 NA intron (NM_013901, intron 1 of 3) CpG 191 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding common_peak2_148_119_0.0196068009167476_6.91669399606689_0.309139438170586-3 chr9 56506162 56507402 + 0.309139438170586 NA Intergenic GA-rich|Low_complexity|Low_complexity 88163 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_599_479_0.015078930051514_8.91443006063427_0.30913928108666 chr15 36791183 36794741 + 0.30913928108666 NA intron (NM_001253806, intron 1 of 5) CpG 1576 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_266_213_0.0206208626529936_7.75177741772764_0.309110009535892 chr10 60822186 60824298 + 0.309110009535892 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 8339 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-13 chr3 98027482 98027771 + 0.309074325783021 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 14088 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-16 chr7 98815774 98815981 + 0.309074325783021 NA Intergenic Intergenic -19235 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-4 chr16 94289925 94290227 + 0.309074325783021 NA exon (NM_001360045, exon 1 of 11) exon (NM_001360045, exon 1 of 11) 215 NM_001360045 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-19 chr8 84389102 84389432 + 0.309074325783021 NA Intergenic Intergenic -26097 NM_001252060 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-8 chr16 55813874 55814165 + 0.309074325783021 NA exon (NM_001159394, exon 11 of 12) exon (NM_001159394, exon 11 of 12) 8119 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-5 chr11 51919129 51919417 + 0.309074325783021 NA Intergenic Intergenic -48358 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-6 chr16 24498676 24498893 + 0.309074325783021 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -30530 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-4 chr13 36116770 36116999 + 0.309074325783021 NA promoter-TSS (NM_024274) promoter-TSS (NM_024274) 473 NM_201358 380840 Mm.390576 NM_201358 ENSMUSG00000046573 Lyrm4 BC034664|Gm903 LYR motif containing 4 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-14 chr6 61234021 61234244 + 0.309074325783021 NA intron (NM_183310, intron 1 of 10) intron (NM_183310, intron 1 of 10) -53322 NR_040287 100504262 Mm.438066 NR_040287 A730020E08Rik - RIKEN cDNA A730020E08 gene ncRNA common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-20 chr9 44484397 44484693 + 0.309074325783021 NA intron (NM_001357490, intron 1 of 7) intron (NM_001357490, intron 1 of 7) 1720 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-10 chr6 113693401 113693747 + 0.309074325783021 NA intron (NM_001113553, intron 11 of 11) intron (NM_001113553, intron 11 of 11) -3476 NM_001347356 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-30 chr7 112187833 112188072 + 0.309074325783021 NA Intergenic Intergenic -28470 NM_001360257 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-16 chr7 34130846 34131168 + 0.309074325783021 NA intron (NM_207212, intron 1 of 7) intron (NM_207212, intron 1 of 7) 2261 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-18 chr9 22385757 22385998 + 0.309074325783021 NA intron (NM_028390, intron 1 of 23) intron (NM_028390, intron 1 of 23) 3329 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-34 chr9 79214088 79214319 + 0.309074325783021 NA Intergenic Intergenic 305099 NR_045336 100038575 Mm.367838 NR_045336 ENSMUSG00000111765 Gm10635 - predicted gene 10635 ncRNA unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-11 chr7 28947390 28947632 + 0.309074325783021 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 14821 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-7 chr17 35870959 35871171 + 0.309074325783021 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 4450 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-10 chr12 84191905 84192116 + 0.309074325783021 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 2005 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-7 chr17 35591296 35591510 + 0.309074325783021 NA Intergenic Intergenic 23918 NM_175148 69542 Mm.265291 NM_175148 ENSMUSG00000039269 2300002M23Rik Stg|emprin RIKEN cDNA 2300002M23 gene protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-27 chr7 41393614 41393859 + 0.309074325783021 NA promoter-TSS (NM_183167) promoter-TSS (NM_183167) -357 NM_001199330 233168 Mm.379390 NM_183167 ENSMUSG00000056383 AI987944 - expressed sequence AI987944 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-5 chr14 30876476 30876724 + 0.309074325783021 NA 3' UTR (NM_028839, exon 8 of 8) 3' UTR (NM_028839, exon 8 of 8) -2657 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-2 chr15 40824703 40824897 + 0.309074325783021 NA intron (NM_001356998, intron 2 of 6) intron (NM_001356998, intron 2 of 6) 169758 NM_011766 22762 Mm.39496 NM_011766 ENSMUSG00000022306 Zfpm2 B330005D23Rik|FOG-2|FOG2 zinc finger protein, multitype 2 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-9 chr8 91462735 91463217 + 0.309074325783021 NA intron (NM_011936, intron 4 of 8) intron (NM_011936, intron 4 of 8) 149451 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-13 chr6 17979585 17980032 + 0.309074325783021 NA Intergenic Lx9|LINE|L1 50637 NM_023653 22413 Mm.33653 NM_023653 ENSMUSG00000010797 Wnt2 2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a wingless-type MMTV integration site family, member 2 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-4 chr10 93945235 93945507 + 0.309074325783021 NA Intergenic Intergenic 18492 NR_029764 723908 NR_029764 ENSMUSG00000065607 Mir331 Mirn331|mmu-mir-331 microRNA 331 ncRNA common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-15 chr6 108442933 108443198 + 0.309074325783021 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -46678 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-10 chr16 45157723 45158163 + 0.309074325783021 NA promoter-TSS (NM_026402) promoter-TSS (NM_026402) 730 NM_001356453 74102 Mm.264984 NM_028756 ENSMUSG00000022664 Slc35a5 1010001J06Rik|AU021179|BB097433|D16Ertd450e|D730043G07Rik solute carrier family 35, member A5 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-14 chr16 10782618 10782818 + 0.309074325783021 NA Intergenic Intergenic 2818 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-22 chr5 31631888 31632123 + 0.309074325783021 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 18054 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021 chr1 132196797 132197041 + 0.309074325783021 NA intron (NM_001033250, intron 1 of 3) intron (NM_001033250, intron 1 of 3) -1169 NR_029777 723818 NR_029777 ENSMUSG00000065435 Mir135b Mirn135b|mir-135b microRNA 135b ncRNA common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-16 chr6 99523200 99523416 + 0.309074325783021 NA Intergenic Intergenic -2315 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-21 chr9 87254869 87255116 + 0.309074325783021 NA intron (NM_199316, intron 1 of 26) intron (NM_199316, intron 1 of 26) 540 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-8 chr17 80127596 80127869 + 0.309074325783021 NA exon (NM_176963, exon 1 of 7) exon (NM_176963, exon 1 of 7) 261 NM_176963 319625 Mm.29098 NM_176963 ENSMUSG00000035473 Galm A530057M15Rik|AU015645|AU020959 galactose mutarotase protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-4 chr13 24831137 24831400 + 0.309074325783021 NA promoter-TSS (NM_019551) promoter-TSS (NM_019551) 221 NM_025790 66834 Mm.2125 NM_025790 ENSMUSG00000006717 Acot13 0610006O17Rik|Them2 acyl-CoA thioesterase 13 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-18 chr8 35606313 35606606 + 0.309074325783021 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -17439 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-14 chr6 52209757 52209969 + 0.309074325783021 NA intron (NR_015611, intron 1 of 2) intron (NR_015611, intron 1 of 2) -1141 NM_010454 15403 Mm.222030 NM_010454 ENSMUSG00000043219 Hoxa6 Hox-1.2 homeobox A6 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-3 chr10 80399920 80400129 + 0.309074325783021 NA promoter-TSS (NM_001306143) promoter-TSS (NM_001306143) -493 NM_001306143 17192 Mm.7142 NM_013595 ENSMUSG00000035478 Mbd3 AI181826|AU019209 methyl-CpG binding domain protein 3 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-8 chr2 58549929 58550252 + 0.309074325783021 NA intron (NM_001110204, intron 1 of 12) intron (NM_001110204, intron 1 of 12) 11320 NM_001355049 11477 Mm.689 NM_007394 ENSMUSG00000026836 Acvr1 ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L activin A receptor, type 1 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-12 chr4 152007627 152007896 + 0.309074325783021 NA Intergenic Intergenic -1130 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-12 chr17 7030400 7030758 + 0.309074325783021 NA intron (NM_001033442, intron 2 of 3) intron (NM_001033442, intron 2 of 3) 5036 NM_001033442 381059 Mm.490353 NM_001033442 ENSMUSG00000095720 Gm1604b Gm1604 predicted gene 1604b protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021 chr1 105422296 105422515 + 0.309074325783021 NA Intergenic Intergenic -65695 NM_001160368 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-20 chrX 159810047 159810371 + 0.309074325783021 NA intron (NM_021389, intron 3 of 16) ID_B1|SINE|B4 -30259 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-17 chr7 108941054 108941271 + 0.309074325783021 NA intron (NM_025344, intron 7 of 7) intron (NM_025344, intron 7 of 7) 6747 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-15 chr16 24450302 24450512 + 0.309074325783021 NA intron (NM_001145952, intron 1 of 11) intron (NM_001145952, intron 1 of 11) 2316 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-3 chr15 64366094 64366356 + 0.309074325783021 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 16694 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-2 chr11 3291730 3291933 + 0.309074325783021 NA exon (NM_001253691, exon 1 of 5) exon (NM_001253691, exon 1 of 5) 1374 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-5 chr19 21106715 21106920 + 0.309074325783021 NA Intergenic Intergenic 2107 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-8 chr17 74088653 74088930 + 0.309074325783021 NA Intergenic Intergenic -40875 NM_053188 94224 Mm.38933 NM_053188 ENSMUSG00000038541 Srd5a2 5ART2|S5AR 2 steroid 5 alpha-reductase 2 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-6 chr13 36463284 36463485 + 0.309074325783021 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 271093 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-11 chr16 92929753 92929968 + 0.309074325783021 NA Intergenic Intergenic -103786 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-19 chrX 51018423 51018636 + 0.309074325783021 NA promoter-TSS (NM_172413) promoter-TSS (NM_172413) -511 NM_172413 72065 Mm.43152 NM_172413 ENSMUSG00000050029 Rap2c 2010200P20Rik|AI194294|AL022976 RAP2C, member of RAS oncogene family protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-25 chr5 73490383 73490601 + 0.309074325783021 NA promoter-TSS (NM_001190733) promoter-TSS (NM_001190733) -534 NM_001190733 100737 Mm.220312 NM_178896 ENSMUSG00000051674 Dcun1d4 AI836376 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-18 chr17 70998888 70999209 + 0.309074325783021 NA intron (NM_026064, intron 1 of 3) intron (NM_026064, intron 1 of 3) -1036 NM_001357820 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-11 chr9 99700844 99701104 + 0.309074325783021 NA intron (NM_001194921, intron 1 of 4) intron (NM_001194921, intron 1 of 4) 9089 NM_019815 56492 Mm.386784 NM_019815 ENSMUSG00000032473 Cldn18 - claudin 18 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-29 chr7 89403451 89403797 + 0.309074325783021 NA promoter-TSS (NM_008055) promoter-TSS (NM_008055) 598 NM_001360746 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021 chr13 63139991 63140217 + 0.309074325783021 NA intron (NM_001289926, intron 5 of 15) intron (NM_001289926, intron 5 of 15) -99925 NR_110520 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-18 chr8 33818424 33818661 + 0.309074325783021 NA intron (NM_001042675, intron 5 of 6) intron (NM_001042675, intron 5 of 6) -70772 NM_001206849 72632 Mm.443483 NM_001206849 ENSMUSG00000094500 Smim18 2700090O03Rik|AI835723 small integral membrane protein 18 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-3 chr13 15806330 15806536 + 0.309074325783021 NA promoter-TSS (NR_046131) promoter-TSS (NR_046131) -810 NR_046131 328190 Mm.446957 NR_046131 ENSMUSG00000113338 A530046M15Rik A530046M15 RIKEN cDNA A530046M15 gene ncRNA common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-20 chr2 3238775 3239122 + 0.309074325783021 NA Intergenic Intergenic -45264 NM_008708 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-5 chr15 76672351 76672594 + 0.309074325783021 NA intron (NR_152559, intron 1 of 8) intron (NR_152559, intron 1 of 8) 829 NM_033371 73062 Mm.322901 NM_033371 ENSMUSG00000033819 Ppp1r16a 2900084E10Rik|Mypt3|R75527 protein phosphatase 1, regulatory (inhibitor) subunit 16A protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-9 chr2 77269671 77269914 + 0.309074325783021 NA intron (NM_175465, intron 1 of 17) intron (NM_175465, intron 1 of 17) 10800 NM_175465 228071 Mm.27120 NM_175465 ENSMUSG00000042272 Sestd1 1500031J16Rik|A930010O20|Solo/Trio8 SEC14 and spectrin domains 1 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-3 chr10 83146043 83146309 + 0.309074325783021 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 160679 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-10 chr3 38044160 38044396 + 0.309074325783021 NA Intergenic Intergenic 145465 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-7 chr3 4669648 4669858 + 0.309074325783021 NA Intergenic Intergenic -128955 NR_045272 100503859 Mm.75172 NR_045272 ENSMUSG00000098659 1110015O18Rik - RIKEN cDNA 1110015O18 gene ncRNA common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021 chr1 71886913 71887160 + 0.309074325783021 NA Intergenic Intergenic -1076 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-9 chr3 84525088 84525469 + 0.309074325783021 NA intron (NM_001293801, intron 4 of 7) intron (NM_001293801, intron 4 of 7) -44839 NM_001033301 229474 Mm.331107 NM_001033301 ENSMUSG00000041842 Fhdc1 6330505N24Rik|Gm126 FH2 domain containing 1 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-13 chr6 5138569 5138799 + 0.309074325783021 NA intron (NM_181595, intron 12 of 15) intron (NM_181595, intron 12 of 15) 55262 NM_011134 18979 Mm.237657 NM_011134 ENSMUSG00000002588 Pon1 Pon paraoxonase 1 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-2 chr1 138288442 138288686 + 0.309074325783021 NA 3' UTR (NM_177397, exon 3 of 3) 3' UTR (NM_177397, exon 3 of 3) 14826 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-12 chr14 54383207 54383427 + 0.309074325783021 NA intron (NM_011405, intron 4 of 11) intron (NM_011405, intron 4 of 11) 22476 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-17 chr8 35600431 35600710 + 0.309074325783021 NA intron (NM_001081279, intron 1 of 2) MIRb|SINE|MIR -11550 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-15 chr5 117159507 117159868 + 0.309074325783021 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 26099 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-9 chr5 124189277 124189526 + 0.309074325783021 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -2219 NM_001289472 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-2 chr16 55973168 55973477 + 0.309074325783021 NA promoter-TSS (NM_173026) promoter-TSS (NM_173026) -482 NM_173026 271377 Mm.282814 NM_173026 ENSMUSG00000022601 Zbtb11 9230110G02Rik|ZNF-U69274 zinc finger and BTB domain containing 11 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-28 chr7 51341862 51342234 + 0.309074325783021 NA Intergenic Intergenic -168981 NR_073508 233246 Mm.254431 NM_177694 ENSMUSG00000055489 Ano5 9330162L24|Gdd1|Tmem16e anoctamin 5 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-12 chr3 81377130 81377417 + 0.309074325783021 NA Intergenic B1_Mm|SINE|Alu 340857 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-14 chr3 132117316 132117624 + 0.309074325783021 NA intron (NM_020265, intron 1 of 3) intron (NM_020265, intron 1 of 3) 32178 NM_020265 56811 Mm.103593 NM_020265 ENSMUSG00000028031 Dkk2 - dickkopf WNT signaling pathway inhibitor 2 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-10 chr6 128438297 128438543 + 0.309074325783021 NA promoter-TSS (NR_028592) promoter-TSS (NR_028592) 236 NM_010219 14228 Mm.12758 NM_010219 ENSMUSG00000030357 Fkbp4 AL022792|AW208983|FKBP-4|FKBP-52|FKBP52|FKPB52|p59 FK506 binding protein 4 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-19 chr18 60991986 60992249 + 0.309074325783021 NA Intergenic Intergenic 22082 NM_201353 240332 Mm.39846 NM_201353 ENSMUSG00000052026 Slc6a7 AW455934|PROT solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-6 chr16 15637565 15637782 + 0.309074325783021 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) -193 NM_011159 19090 Mm.71 NM_011159 ENSMUSG00000022672 Prkdc AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip protein kinase, DNA activated, catalytic polypeptide protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-17 chr6 143191736 143192013 + 0.309074325783021 NA intron (NM_029250, intron 4 of 7) intron (NM_029250, intron 4 of 7) 24644 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-12 chr5 149353449 149353663 + 0.309074325783021 NA Intergenic Intergenic -58193 NM_027519 70717 Mm.252139 NM_027519 ENSMUSG00000029659 Medag 6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3 mesenteric estrogen dependent adipogenesis protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-11 chr6 135068861 135069311 + 0.309074325783021 NA intron (NM_181444, intron 1 of 3) intron (NM_181444, intron 1 of 3) 3424 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-6 chr19 59889480 59889712 + 0.309074325783021 NA Intergenic Intergenic 53768 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-23 chr5 32134002 32134296 + 0.309074325783021 NA Intergenic MIR3|SINE|MIR -2323 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-19 chrX 152368652 152368988 + 0.309074325783021 NA promoter-TSS (NR_045452) promoter-TSS (NR_045452) -102 NR_132633 70771 Mm.158445 NM_027543 ENSMUSG00000056679 Gpr173 3230401K02Rik|Sreb3 G-protein coupled receptor 173 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-13 chr14 120277337 120277627 + 0.309074325783021 NA intron (NM_001360380, intron 1 of 7) intron (NM_001360380, intron 1 of 7) 1813 NM_001360380 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind like splicing factor 2 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-10 chr8 94271524 94271788 + 0.309074325783021 NA intron (NM_001357268, intron 1 of 20) intron (NM_001357268, intron 1 of 20) 3050 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-7 chr11 88532522 88532784 + 0.309074325783021 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -86598 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-7 chr14 57760199 57760490 + 0.309074325783021 NA Intergenic PB1D10|SINE|Alu -14221 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-4 chr11 88498092 88498450 + 0.309074325783021 NA intron (NM_054043, intron 6 of 13) intron (NM_054043, intron 6 of 13) -120980 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-5 chr2 152810376 152810595 + 0.309074325783021 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 18004 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-3 chr11 75631082 75631334 + 0.309074325783021 NA intron (NM_008916, intron 1 of 11) CpG 188 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-16 chr17 24414086 24414400 + 0.309074325783021 NA promoter-TSS (NM_009070) promoter-TSS (NM_009070) 270 NR_033554 654822 Mm.489806 NM_001039561 ENSMUSG00000073437 D330041H03Rik - RIKEN cDNA D330041H03 gene ncRNA unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021 chr1 92802521 92802830 + 0.309074325783021 NA Intergenic Intergenic -28970 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-15 chr4 124741956 124742297 + 0.309074325783021 NA intron (NR_151694, intron 2 of 3) intron (NR_151694, intron 2 of 3) 276 NR_126474 16330 Mm.296202 NM_008385 ENSMUSG00000028894 Inpp5b 5PTase|AW260155|INPP5P inositol polyphosphate-5-phosphatase B protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-3 chr16 91729410 91729641 + 0.309074325783021 NA promoter-TSS (NM_133679) promoter-TSS (NM_133679) 154 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-19 chr9 29332948 29333177 + 0.309074325783021 NA intron (NM_001357601, intron 1 of 7) intron (NM_001357601, intron 1 of 7) 79623 NM_001357601 235106 Mm.283138 NM_172290 ENSMUSG00000059974 Ntm 6230410L23Rik|B230210G24Rik|Hnt|Igdcc2|R75390 neurotrimin protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-31 chr8 36898713 36898941 + 0.309074325783021 NA intron (NM_001194940, intron 2 of 17) B4A|SINE|B4 53615 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-6 chr13 119143758 119144008 + 0.309074325783021 NA Intergenic Intergenic 265128 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-4 chr12 73202114 73202348 + 0.309074325783021 NA intron (NM_008612, intron 6 of 7) intron (NM_008612, intron 6 of 7) 78514 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-6 chr3 7495962 7496155 + 0.309074325783021 NA Intergenic Intergenic -7368 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-4 chr18 34600659 34601009 + 0.309074325783021 NA TTS (NM_001361136) TTS (NM_001361136) -3366 NR_152400 271508 Mm.417609 NM_177773 ENSMUSG00000049357 4933408B17Rik - RIKEN cDNA 4933408B17 gene protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021 chr1 64929399 64929624 + 0.309074325783021 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 27313 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-6 chr2 26446667 26446922 + 0.309074325783021 NA intron (NR_152209, intron 1 of 2) intron (NR_152209, intron 1 of 2) 870 NR_152207 100125929 Mm.392411 NR_152207 0610009E02Rik - RIKEN cDNA 0610009E02 gene ncRNA unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-8 chr14 46985032 46985304 + 0.309074325783021 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -16172 NM_001163433 74480 Mm.214454 NM_028966 ENSMUSG00000021838 Samd4 1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk sterile alpha motif domain containing 4 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-7 chr2 44526230 44526521 + 0.309074325783021 NA Intergenic Intergenic 335247 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-11 chr3 144098510 144098844 + 0.309074325783021 NA Intergenic Intergenic 103655 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-5 chr11 103144880 103145089 + 0.309074325783021 NA Intergenic Intergenic 11625 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-12 chr8 86794446 86794726 + 0.309074325783021 NA Intergenic Intergenic -48580 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-11 chr12 105003665 105003897 + 0.309074325783021 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -5104 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-6 chr11 74896652 74896882 + 0.309074325783021 NA intron (NM_197943, intron 1 of 22) CpG 313 NM_197943 97761 Mm.245894 NM_197943 ENSMUSG00000038351 Sgsm2 D630003G22Rik|R74628|Rutbc1|mKIAA0397 small G protein signaling modulator 2 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-12 chrX 12860281 12860628 + 0.309074325783021 NA Intergenic Intergenic -76419 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 - expressed sequence AA414768 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-2 chr10 96687132 96687579 + 0.309074325783021 NA Intergenic Intergenic 70354 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-21 chr2 118765630 118765895 + 0.309074325783021 NA Intergenic Intergenic -3101 NM_001001982 214239 Mm.379342 NM_001001982 ENSMUSG00000045838 A430105I19Rik Ccdc9b|Gm353 RIKEN cDNA A430105I19 gene protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-11 chr4 82401230 82401557 + 0.309074325783021 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 104386 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-17 chr17 24469715 24469981 + 0.309074325783021 NA promoter-TSS (NM_025954) promoter-TSS (NM_025954) -625 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-4 chr13 67723771 67724091 + 0.309074325783021 NA intron (NM_145622, intron 1 of 3) intron (NM_145622, intron 1 of 3) 5242 NM_145622 235907 Mm.440123 NM_145622 ENSMUSG00000071281 Zfp65 KRAB5|Zfp71-rs1|pz114 zinc finger protein 65 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-2 chr10 77978733 77978970 + 0.309074325783021 NA intron (NM_026431, intron 1 of 6) intron (NM_026431, intron 1 of 6) 201 NM_026431 67884 Mm.297512 NM_026431 ENSMUSG00000020284 1810043G02Rik AV026620|D10Jhu13e RIKEN cDNA 1810043G02 gene protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-32 chr8 69114599 69114951 + 0.309074325783021 NA Intergenic Intergenic -25553 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-10 chr19 44408179 44408407 + 0.309074325783021 NA promoter-TSS (NM_009127) promoter-TSS (NM_009127) -584 NM_009127 20249 Mm.267377 NM_009127 ENSMUSG00000037071 Scd1 AA589638|AI265570|Scd|Scd-1|ab stearoyl-Coenzyme A desaturase 1 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-8 chr4 120517011 120517249 + 0.309074325783021 NA intron (NM_001355424, intron 11 of 14) intron (NM_001355424, intron 11 of 14) -15101 NM_177570 194219 Mm.29788 NM_177570 ENSMUSG00000047518 Slfnl1 4933406A14Rik schlafen like 1 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-9 chr12 75735415 75735614 + 0.309074325783021 NA exon (NM_030750, exon 1 of 3) exon (NM_030750, exon 1 of 3) 215 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding unique_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-13 chr9 57131406 57131640 + 0.309074325783021 NA promoter-TSS (NR_102289) promoter-TSS (NR_102289) -233 NR_102289 76794 Mm.472839 NR_102289 ENSMUSG00000086728 Man2c1os 2410133F24Rik|AI851351 mannosidase, alpha, class 2C, member 1, opposite strand ncRNA unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-8 chr5 91565287 91565543 + 0.309074325783021 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 47715 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-5 chr15 85002415 85002617 + 0.309074325783021 NA Intergenic Intergenic -14545 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-9 chr15 77806306 77806683 + 0.309074325783021 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 35681 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-10 chr2 154613642 154613933 + 0.309074325783021 NA intron (NM_199304, intron 1 of 14) CpG 419 NM_199304 228807 Mm.103555 NM_199304 ENSMUSG00000059842 Zfp341 Znf341 zinc finger protein 341 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-9 chr18 24941995 24942236 + 0.309074325783021 NA intron (NM_001289654, intron 5 of 24) intron (NM_001289654, intron 5 of 24) 223850 NM_001142697 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-5 chr13 59874619 59874977 + 0.309074325783021 NA Intergenic Intergenic -51651 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-3 chr12 69419602 69419857 + 0.309074325783021 NA Intergenic Intergenic 47579 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-16 chr4 149902788 149903043 + 0.309074325783021 NA intron (NM_029035, intron 2 of 2) intron (NM_029035, intron 2 of 2) 52091 NM_029035 74646 Mm.30 NM_029035 ENSMUSG00000039911 Spsb1 1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-14 chr3 144197501 144197756 + 0.309074325783021 NA intron (NM_001161769, intron 2 of 4) intron (NM_001161769, intron 2 of 4) 4704 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-17 chr7 108941034 108941275 + 0.309074325783021 NA intron (NM_025344, intron 7 of 7) intron (NM_025344, intron 7 of 7) 6739 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-3 chr11 68872201 68872493 + 0.309074325783021 NA Intergenic Intergenic -16206 NM_177060 320040 Mm.305696 NM_177060 ENSMUSG00000046490 Rnf222 9930039A11Rik ring finger protein 222 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-11 chr3 9523109 9523360 + 0.309074325783021 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 86851 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-13 chr2 131029228 131029453 + 0.309074325783021 NA 3' UTR (NM_009730, exon 29 of 29) 3' UTR (NM_009730, exon 29 of 29) 11058 NR_105969 102465606 NR_105969 ENSMUSG00000098686 Mir6973b Gm27815|mmu-mir-6973b microRNA 6973b ncRNA common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-15 chr6 86252433 86252666 + 0.309074325783021 NA intron (NM_031199, intron 2 of 5) intron (NM_031199, intron 2 of 5) 57322 NM_031199 21802 Mm.137222 NM_031199 ENSMUSG00000029999 Tgfa wa-1|wa1 transforming growth factor alpha protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021 chr12 40223680 40224022 + 0.309074325783021 NA promoter-TSS (NM_013562) promoter-TSS (NM_013562) 487 NR_045157 629820 Mm.435540 NR_045157 ENSMUSG00000035983 Gm7008 EG629820 predicted gene 7008 ncRNA common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021 chr1 91003505 91003715 + 0.309074325783021 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 4883 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-2 chr1 191906148 191906425 + 0.309074325783021 NA promoter-TSS (NM_009579) promoter-TSS (NM_009579) -495 NM_009579 22782 Mm.9024 NM_009579 ENSMUSG00000037434 Slc30a1 AI839647|C130040I11Rik|Znt1 solute carrier family 30 (zinc transporter), member 1 protein-coding unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-7 chr5 64389253 64389538 + 0.309074325783021 NA Intergenic Intergenic 78547 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA unique_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-12 chr8 86873665 86873878 + 0.309074325783021 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 11487 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-2 chr12 69389216 69389408 + 0.309074325783021 NA Intergenic Intergenic 17162 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-24 chr5 36726178 36726419 + 0.309074325783021 NA Intergenic Intergenic 22381 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-8 chr11 96301762 96302107 + 0.309074325783021 NA TTS (NM_008269) TTS (NM_008269) -1578 NM_008268 15413 Mm.207 NM_008268 ENSMUSG00000038700 Hoxb5 AI385717|Hox-2.1 homeobox B5 protein-coding common_peak2_16_13_0.00953091485209168_3.81212037948365_0.309074325783021-9 chr19 17140142 17140367 + 0.309074325783021 NA intron (NM_181348, intron 9 of 19) intron (NM_181348, intron 9 of 19) 184136 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding unique_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-7 chr14 7811003 7811253 + 0.309074325783021 NA Intergenic Intergenic -6829 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-33 chr8 121832658 121832860 + 0.309074325783021 NA Intergenic Intergenic -3190 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak1_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-18 chr7 25376585 25376871 + 0.309074325783021 NA promoter-TSS (NR_073028) promoter-TSS (NR_073028) -91 NR_073028 654804 Mm.389841 NM_001039540 ENSMUSG00000053714 4732471J01Rik - RIKEN cDNA 4732471J01 gene ncRNA common_peak2_15_14_-0.176850551390723_3.81846531991316_0.309074325783021-26 chr5 91111580 91112004 + 0.309074325783021 NA Intergenic Intergenic -27807 NM_009704 11839 Mm.8039 NM_009704 ENSMUSG00000029378 Areg AR|Mcub|Sdgf amphiregulin protein-coding common_peak2_66_53_0.0266655154769193_5.76822025990193_0.309072945808617 chr12 112580286 112580897 + 0.309072945808617 NA Intergenic Intergenic -8193 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_64_55_-0.0692148284218561_5.77274750784668_0.309072945808617-2 chr2 18672523 18672924 + 0.309072945808617 NA intron (NM_147778, intron 1 of 7) CpG 261 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak2_64_55_-0.0692148284218561_5.77274750784668_0.309072945808617 chr13 55099567 55100199 + 0.309072945808617 NA intron (NM_001293660, intron 1 of 12) CpG 417 NR_121592 20184 Mm.259301 NM_011307 ENSMUSG00000025878 Uimc1 9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110 ubiquitin interaction motif containing 1 protein-coding common_peak1_64_55_-0.0692148284218561_5.77274750784668_0.309072945808617-2 chr1 172206094 172206695 + 0.309072945808617 NA intron (NM_001329871, intron 1 of 3) intron (NM_001329871, intron 1 of 3) 410 NM_001329871 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding common_peak2_63_55_-0.0914248369862962_5.76164250356446_0.309072945808617 chr15 74967415 74968373 + 0.309072945808617 NA Intergenic Intergenic 12788 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_64_55_-0.0692148284218561_5.77274750784668_0.309072945808617 chr1 33719855 33720537 + 0.309072945808617 NA promoter-TSS (NM_001159729) promoter-TSS (NM_001159729) -223 NM_001159729 19335 Mm.86744 NM_008999 ENSMUSG00000004768 Rab23 AW545388|opb|opb2 RAB23, member RAS oncogene family protein-coding common_peak2_63_55_-0.0914248369862962_5.76164250356446_0.309072945808617-3 chr9 63398808 63399614 + 0.309072945808617 NA promoter-TSS (NM_027090) promoter-TSS (NM_027090) 33 NM_027090 69478 Mm.113942 NM_027090 ENSMUSG00000032403 2300009A05Rik - RIKEN cDNA 2300009A05 gene protein-coding common_peak1_64_55_-0.0692148284218561_5.77274750784668_0.309072945808617-3 chr19 57360102 57360719 + 0.309072945808617 NA promoter-TSS (NM_145505) promoter-TSS (NM_145505) 489 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak2_63_55_-0.0914248369862962_5.76164250356446_0.309072945808617-2 chr2 24563105 24564082 + 0.309072945808617 NA Intergenic Intergenic -87994 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_64_55_-0.0692148284218561_5.77274750784668_0.309072945808617-4 chr6 50394563 50395471 + 0.309072945808617 NA intron (NM_001163645, intron 2 of 21) MTEa|LTR|ERVL-MaLR -12180 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_63_55_-0.0914248369862962_5.76164250356446_0.309072945808617-2 chr17 88542287 88542970 + 0.309072945808617 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 12504 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak1_66_53_0.0266655154769193_5.76822025990193_0.309072945808617 chr12 91588669 91589283 + 0.309072945808617 NA intron (NM_175335, intron 1 of 8) intron (NM_175335, intron 1 of 8) 673 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak1_63_55_-0.0914248369862962_5.76164250356446_0.309072945808617 chr13 108044490 108044802 + 0.309072945808617 NA intron (NM_001048250, intron 1 of 2) CpG 172 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_66_53_0.0266655154769193_5.76822025990193_0.309072945808617-2 chr17 46277908 46278820 + 0.309072945808617 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 4662 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_63_55_-0.0914248369862962_5.76164250356446_0.309072945808617-3 chr5 67307040 67307716 + 0.309072945808617 NA intron (NM_178651, intron 1 of 17) CpG 423 NM_001310629 109108 Mm.234455 NM_178651 ENSMUSG00000029221 Slc30a9 2310024J23Rik|AL024256|GAC63|HUEL|znT-9 solute carrier family 30 (zinc transporter), member 9 protein-coding common_peak1_150_120_0.0267346669824446_6.93223057076582_0.309072690382408 chr4 133625329 133626744 + 0.309072690382408 NA intron (NM_001017968, intron 2 of 7) intron (NM_001017968, intron 2 of 7) 7393 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak2_148_125_-0.0507825269746505_6.95188866001259_0.308942437856269 chr2 104493441 104494483 + 0.308942437856269 NA 5' UTR (NM_001145824, exon 1 of 16) 5' UTR (NM_001145824, exon 1 of 16) 527 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding common_peak1_149_125_-0.041200438693398_6.95667970415322_0.308942437856269 chr8 121950880 121951617 + 0.308942437856269 NA intron (NM_016812, intron 1 of 13) intron (NM_016812, intron 1 of 13) 756 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_148_125_-0.0507825269746505_6.95188866001259_0.308942437856269 chr10 21993888 21995317 + 0.308942437856269 NA promoter-TSS (NM_011361) promoter-TSS (NM_011361) -64 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679-2 chr2 130906481 130907287 + 0.308926694084679 NA promoter-TSS (NR_015523) promoter-TSS (NR_015523) 389 NM_009730 11990 Mm.119936 NM_009730 ENSMUSG00000027312 Atrn AW558010|Mgca|mg attractin protein-coding common_peak1_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679-5 chr9 119322084 119322723 + 0.308926694084679 NA promoter-TSS (NR_045693) promoter-TSS (NR_045693) 24 NR_045693 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding common_peak2_67_54_0.0214161642385475_5.79206779564393_0.308926694084679-3 chr2 156862224 156862852 + 0.308926694084679 NA promoter-TSS (NM_026124) promoter-TSS (NM_026124) 407 NR_015591 74487 Mm.490465 NR_015591 ENSMUSG00000085741 5430405H02Rik 2610307N17Rik RIKEN cDNA 5430405H02 gene ncRNA common_peak1_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679 chr10 27653210 27653938 + 0.308926694084679 NA Intergenic Intergenic -36632 NM_008481 16773 Mm.256087 NM_008481 ENSMUSG00000019899 Lama2 5830440B04|dy|mKIAA4087|mer|merosin laminin, alpha 2 protein-coding common_peak1_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679-3 chr18 34331271 34331857 + 0.308926694084679 NA intron (NM_025527, intron 1 of 4) intron (NM_025527, intron 1 of 4) 419 NM_025527 66384 Mm.29452 NM_025527 ENSMUSG00000014504 Srp19 2310020D23Rik signal recognition particle 19 protein-coding common_peak1_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679-4 chr7 58801210 58801888 + 0.308926694084679 NA intron (NM_009728, intron 10 of 20) intron (NM_009728, intron 10 of 20) 143347 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_67_54_0.0214161642385475_5.79206779564393_0.308926694084679-4 chr9 72639969 72640637 + 0.308926694084679 NA Intergenic Intergenic -22028 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_67_54_0.0214161642385475_5.79206779564393_0.308926694084679 chr11 50131385 50131934 + 0.308926694084679 NA intron (NM_029745, intron 1 of 20) CpG 299 NM_029745 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak2_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679-3 chr5 92218916 92219796 + 0.308926694084679 NA Intergenic B2_Mm2|SINE|B2 -3948 NR_033483 57425 Mm.2548 NM_020562 ENSMUSG00000029409 U90926 - cDNA sequence U90926 ncRNA common_peak1_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679-2 chr17 42908522 42909345 + 0.308926694084679 NA Intergenic Intergenic -32509 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak2_65_56_-0.0728790093402267_5.79645050949463_0.308926694084679 chr11 44947483 44948631 + 0.308926694084679 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 168871 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak2_67_54_0.0214161642385475_5.79206779564393_0.308926694084679-2 chr2 90565400 90566370 + 0.308926694084679 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 14762 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_154_124_0.0172671740713293_6.97441787169775_0.308816337106353 chr16 17200218 17201492 + 0.308816337106353 NA intron (NM_009456, intron 1 of 3) intron (NM_009456, intron 1 of 3) 637 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak2_154_124_0.0172671740713293_6.97441787169775_0.308816337106353-2 chr3 101571979 101573526 + 0.308816337106353 NA Intergenic Intergenic 31955 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_155_124_0.0264795328739931_6.97902405109908_0.308816337106353 chr8 107490126 107491227 + 0.308816337106353 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) 54278 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_68_55_0.0163339819661052_5.81552191304066_0.308785666485023-2 chr19 8723653 8724546 + 0.308785666485023 NA promoter-TSS (NM_001161413) promoter-TSS (NM_001161413) 612 NR_002896 83673 Mm.292489 NR_002896 ENSMUSG00000108414 Snhg1 - small nucleolar RNA host gene 1 ncRNA common_peak1_68_55_0.0163339819661052_5.81552191304066_0.308785666485023 chr16 10975373 10976008 + 0.308785666485023 NA intron (NM_019980, intron 1 of 3) MER81|DNA|hAT-Blackjack 17431 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_68_55_0.0163339819661052_5.81552191304066_0.308785666485023-2 chr4 88411193 88412278 + 0.308785666485023 NA TTS (NM_001081184) TTS (NM_001081184) 27191 NM_025760 66775 Mm.386788 NM_025760 ENSMUSG00000028497 Hacd4 4933428I03Rik|Hcad4|Ptplad2 3-hydroxyacyl-CoA dehydratase 4 protein-coding common_peak1_69_55_0.036946090914955_5.82582796751508_0.308785666485023 chr1 177013146 177014317 + 0.308785666485023 NA intron (NM_001357390, intron 18 of 18) intron (NM_001357390, intron 18 of 18) -177598 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak1_68_55_0.0163339819661052_5.81552191304066_0.308785666485023-3 chr7 100582640 100583433 + 0.308785666485023 NA promoter-TSS (NM_198831) promoter-TSS (NM_198831) 94 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak1_69_55_0.036946090914955_5.82582796751508_0.308785666485023-3 chr4 136570405 136571205 + 0.308785666485023 NA intron (NM_001356567, intron 6 of 19) intron (NM_001356567, intron 6 of 19) 31918 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak2_68_55_0.0163339819661052_5.81552191304066_0.308785666485023 chr11 8589917 8590685 + 0.308785666485023 NA intron (NM_001083587, intron 3 of 30) B2_Mm2|SINE|B2 74234 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_69_55_0.036946090914955_5.82582796751508_0.308785666485023-2 chr18 4635123 4635718 + 0.308785666485023 NA intron (NM_001081963, intron 1 of 3) CpG 491 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak1_69_55_0.036946090914955_5.82582796751508_0.308785666485023-2 chr2 156180528 156181378 + 0.308785666485023 NA promoter-TSS (NM_001291114) promoter-TSS (NM_001291114) -715 NM_133242 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak1_68_55_0.0163339819661052_5.81552191304066_0.308785666485023-4 chr8 105595193 105595624 + 0.308785666485023 NA Intergenic Intergenic -9821 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak2_69_55_0.036946090914955_5.82582796751508_0.308785666485023 chr12 9029979 9030500 + 0.308785666485023 NA intron (NM_029321, intron 1 of 2) CpG 242 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding common_peak2_68_55_0.0163339819661052_5.81552191304066_0.308785666485023-3 chr5 114650792 114651792 + 0.308785666485023 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 7129 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_66_57_-0.0764279774871843_5.81976700638398_0.308785666485011-4 chr5 134551416 134552176 + 0.308785666485011 NA intron (NM_001039162, intron 1 of 15) intron (NM_001039162, intron 1 of 15) 638 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak1_66_57_-0.0764279774871843_5.81976700638398_0.308785666485011 chr1 66817197 66818166 + 0.308785666485011 NA promoter-TSS (NM_001122738) promoter-TSS (NM_001122738) -86 NM_001122738 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_66_57_-0.0764279774871843_5.81976700638398_0.308785666485011-5 chr7 113151144 113151591 + 0.308785666485011 NA Intergenic Intergenic -9352 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_66_57_-0.0764279774871843_5.81976700638398_0.308785666485011-3 chr5 64861545 64862366 + 0.308785666485011 NA Intergenic Intergenic 58432 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_66_57_-0.0764279774871843_5.81976700638398_0.308785666485011-6 chr8 94875664 94876288 + 0.308785666485011 NA intron (NM_053246, intron 1 of 8) CpG 336 NM_053246 114255 Mm.203949 NM_053246 ENSMUSG00000040631 Dok4 - docking protein 4 protein-coding common_peak1_66_57_-0.0764279774871843_5.81976700638398_0.308785666485011-2 chr1 74274595 74275186 + 0.308785666485011 NA Intergenic Intergenic -3710 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak1_272_226_-0.0326256201807054_7.81023567720056_0.308785357313423 chr15 34081829 34083964 + 0.308785357313423 NA 5' UTR (NM_026002, exon 1 of 12) 5' UTR (NM_026002, exon 1 of 12) 177 NM_001357925 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak1_156_125_0.0241373875244895_6.98934861726216_0.308754782103517 chr9 45905634 45907476 + 0.308754782103517 NA promoter-TSS (NM_001281934) promoter-TSS (NM_001281934) -14 NM_001281934 18554 Mm.3255 NM_008794 ENSMUSG00000035382 Pcsk7 AA959856|PC7|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding common_peak1_276_229_-0.0307302076284595_7.83012494713014_0.308682860876991 chr1 182516180 182518410 + 0.308682860876991 NA exon (NM_009794, exon 1 of 21) exon (NM_009794, exon 1 of 21) 315 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_70_56_0.0317307275419898_5.84875537793574_0.308649587997571-3 chr6 120191507 120192289 + 0.308649587997571 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -1925 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_70_56_0.0317307275419898_5.84875537793574_0.308649587997571-2 chr9 72639923 72640596 + 0.308649587997571 NA Intergenic Intergenic -22072 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_70_56_0.0317307275419898_5.84875537793574_0.308649587997571-4 chr9 98296546 98297346 + 0.308649587997571 NA 5' UTR (NM_001357446, exon 1 of 4) 5' UTR (NM_001357446, exon 1 of 4) 376 NM_001357451 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_70_56_0.0317307275419898_5.84875537793574_0.308649587997571 chr11 95309828 95310198 + 0.308649587997571 NA promoter-TSS (NR_155298) promoter-TSS (NR_155298) 233 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding common_peak1_67_58_-0.0798671715986341_5.84270946356252_0.308649587997571 chr11 31559735 31560952 + 0.308649587997571 NA Intergenic Intergenic 111519 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_70_56_0.0317307275419898_5.84875537793574_0.308649587997571-2 chr17 66519107 66519683 + 0.308649587997571 NA exon (NM_024448, exon 1 of 6) exon (NM_024448, exon 1 of 6) 275 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding common_peak1_70_56_0.0317307275419898_5.84875537793574_0.308649587997571 chr11 33162087 33162961 + 0.308649587997571 NA intron (NM_008722, intron 1 of 10) CpG 682 NM_001252261 18148 Mm.485384 NM_008722 ENSMUSG00000057113 Npm1 B23|NO38|Npm nucleophosmin 1 protein-coding common_peak1_277_230_-0.0318269696062154_7.83583555661295_0.30864929481602 chr4 127329383 127331930 + 0.30864929481602 NA 5' UTR (NM_001160012, exon 1 of 2) 5' UTR (NM_001160012, exon 1 of 2) 180 NM_001160012 14620 Mm.90003 NM_008126 ENSMUSG00000042367 Gjb3 Cnx31|Cx31|D4Wsu144e|Gjb-3 gap junction protein, beta 3 protein-coding common_peak2_155_130_-0.0411591840013701_7.01284340953677_0.308634546459697-2 chr5 123683372 123684813 + 0.308634546459697 NA intron (NM_001359224, intron 1 of 18) CpG 269 NM_019765 56430 Mm.241109 NM_019765 ENSMUSG00000049550 Clip1 1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin CAP-GLY domain containing linker protein 1 protein-coding common_peak2_155_130_-0.0411591840013701_7.01284340953677_0.308634546459697 chr10 80158108 80159687 + 0.308634546459697 NA TTS (NM_021565) TTS (NM_021565) -8942 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_155_130_-0.0411591840013701_7.01284340953677_0.308634546459697 chr7 7298511 7300081 + 0.308634546459697 NA promoter-TSS (NM_001302386) promoter-TSS (NM_001302386) 261 NM_001302387 12727 Mm.297883 NM_011334 ENSMUSG00000000605 Clcn4 Clc4-2|Clcn4-2|clC-4 chloride channel, voltage-sensitive 4 protein-coding common_peak2_156_131_-0.0429768083340472_7.02290571519143_0.308575821423186 chr2 109890448 109891805 + 0.308575821423186 NA intron (NM_011699, intron 1 of 4) CpG 248 NM_011699 22343 Mm.235300 NM_011699 ENSMUSG00000027162 Lin7c 9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3 lin-7 homolog C (C. elegans) protein-coding common_peak2_160_128_0.0262301163738856_7.0243423136102_0.308575821423186 chr10 95515137 95516109 + 0.308575821423186 NA intron (NM_080560, intron 1 of 3) CpG 461 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding common_peak1_160_128_0.0262301163738856_7.0243423136102_0.308575821423186 chr8 70645947 70647327 + 0.308575821423186 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 13101 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-13 chr7 65980746 65981070 + 0.308519316180257 NA intron (NM_011048, intron 12 of 21) intron (NM_011048, intron 12 of 21) -79428 NR_152094 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-3 chr12 113012899 113013338 + 0.308519316180257 NA Intergenic Intergenic -1390 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-3 chr10 18987045 18987427 + 0.308519316180257 NA Intergenic Intergenic 24727 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-4 chr10 111364853 111365101 + 0.308519316180257 NA Intergenic Intergenic 66298 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257 chr1 170912025 170912268 + 0.308519316180257 NA exon (NM_001029984, exon 3 of 6) exon (NM_001029984, exon 3 of 6) 795 NM_001029984 435653 Mm.337931 NM_001029984 ENSMUSG00000070524 Fcrlb FREB-2|FREB2|FcRL2|Fcrlm2|Fcry|mFCRL2 Fc receptor-like B protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-5 chr10 86705264 86705471 + 0.308519316180257 NA promoter-TSS (NM_011631) promoter-TSS (NM_011631) 77 NM_011631 22027 Mm.87773 NM_011631 ENSMUSG00000020048 Hsp90b1 ERp99|GRP94|TA-3|Targ2|Tra-1|Tra1|endoplasmin|gp96 heat shock protein 90, beta (Grp94), member 1 protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-9 chr4 86673891 86674142 + 0.308519316180257 NA Intergenic Intergenic -3957 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-18 chr5 92708003 92708330 + 0.308519316180257 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 24731 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-4 chr16 26083208 26083461 + 0.308519316180257 NA intron (NM_173379, intron 1 of 14) intron (NM_173379, intron 1 of 14) 22450 NM_173379 210530 Mm.326869 NM_173379 ENSMUSG00000038168 P3h2 4832416N06|AW553532|Leprel1|Mlat4 prolyl 3-hydroxylase 2 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-12 chr5 105637674 105637884 + 0.308519316180257 NA Intergenic Intergenic -62190 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-14 chr17 21450544 21450737 + 0.308519316180257 NA intron (NM_009558, intron 1 of 4) intron (NM_009558, intron 1 of 4) 266 NM_009558 22709 Mm.293030 NM_009558 ENSMUSG00000023892 Zfp51 Zfp-51|zfec12 zinc finger protein 51 protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-4 chr11 98944685 98945041 + 0.308519316180257 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 5152 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-9 chr7 29676296 29676499 + 0.308519316180257 NA Intergenic Intergenic 50635 NM_029714 76718 Mm.69030 NM_029714 ENSMUSG00000049123 Catsperg2 1700067C01Rik|CATSPERG cation channel sperm associated auxiliary subunit gamma 2 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-22 chr6 85936631 85936831 + 0.308519316180257 NA Intergenic Intergenic 20760 NM_001362065 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-19 chr7 139388376 139388674 + 0.308519316180257 NA promoter-TSS (NM_001127363) promoter-TSS (NM_001127363) -584 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-2 chr10 126513574 126513937 + 0.308519316180257 NA Intergenic Intergenic 196636 NR_105841 102465224 NR_105841 ENSMUSG00000098756 Mir378d Gm27650|mmu-mir-378d microRNA 378d ncRNA unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-3 chr16 46095062 46095416 + 0.308519316180257 NA intron (NM_032465, intron 4 of 14) intron (NM_032465, intron 4 of 14) 25009 NM_032465 84544 Mm.29204 NM_032465 ENSMUSG00000022657 Cd96 1700109I12Rik|Tactile CD96 antigen protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-12 chr6 57534739 57535036 + 0.308519316180257 NA intron (NM_175523, intron 1 of 6) intron (NM_175523, intron 1 of 6) 539 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257 chr1 77514172 77514434 + 0.308519316180257 NA intron (NM_007936, intron 1 of 17) intron (NM_007936, intron 1 of 17) 785 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-17 chr2 148476296 148476503 + 0.308519316180257 NA Intergenic Intergenic -32864 NM_010740 17064 Mm.681 NM_010740 ENSMUSG00000027435 Cd93 6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68 CD93 antigen protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257 chr1 43142302 43142522 + 0.308519316180257 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 21549 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-25 chr8 126666904 126667154 + 0.308519316180257 NA Intergenic Intergenic -73593 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-2 chr10 37337210 37337441 + 0.308519316180257 NA Intergenic Intergenic -198399 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-16 chr7 112185857 112186101 + 0.308519316180257 NA Intergenic Intergenic -26497 NM_001360257 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-2 chr1 149895295 149895582 + 0.308519316180257 NA intron (NM_008869, intron 5 of 17) intron (NM_008869, intron 5 of 17) 27001 NM_001305632 18783 Mm.4186 NM_008869 ENSMUSG00000056220 Pla2g4a Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-15 chr3 88984679 88984919 + 0.308519316180257 NA exon (NM_138679, exon 2 of 27) exon (NM_138679, exon 2 of 27) 18987 NM_138679 192195 Mm.130752 NM_138679 ENSMUSG00000028053 Ash1l 8030453L17Rik|Ash1|E430018P19Rik|Kmt2h ASH1 like histone lysine methyltransferase protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-9 chr13 63243840 63244105 + 0.308519316180257 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 3943 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-8 chr3 145900239 145900586 + 0.308519316180257 NA Intergenic Intergenic -23850 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-6 chr12 84920069 84920282 + 0.308519316180257 NA 3' UTR (NM_178065, exon 20 of 20) 3' UTR (NM_178065, exon 20 of 20) -43680 NM_013589 16997 Mm.3900 NM_013589 ENSMUSG00000002020 Ltbp2 AW208642 latent transforming growth factor beta binding protein 2 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-7 chr12 118836989 118837278 + 0.308519316180257 NA Intergenic CpG -9196 NM_177082 320145 Mm.51682 NM_177082 ENSMUSG00000048562 Sp8 D930049B17Rik|mBtd trans-acting transcription factor 8 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-7 chr13 69587718 69587980 + 0.308519316180257 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 23614 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-11 chr15 103364428 103364750 + 0.308519316180257 NA intron (NM_001314041, intron 1 of 30) intron (NM_001314041, intron 1 of 30) 2202 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-15 chr8 46151657 46151850 + 0.308519316180257 NA Intergenic CpG -11898 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-10 chr17 47065233 47065635 + 0.308519316180257 NA Intergenic Intergenic -54902 NM_001177374 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-4 chr10 81129107 81129466 + 0.308519316180257 NA Intergenic Intergenic -6985 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-14 chr6 147200374 147200697 + 0.308519316180257 NA intron (NR_033640, intron 2 of 2) intron (NR_033640, intron 2 of 2) 20294 NR_033640 100039641 Mm.170402 NR_033640 ENSMUSG00000085600 E330012B07Rik Gm15768 RIKEN cDNA E330012B07 gene ncRNA common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-15 chr7 28801987 28802237 + 0.308519316180257 NA Intergenic Intergenic -8778 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-20 chr9 44478315 44478524 + 0.308519316180257 NA Intergenic Intergenic -4406 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-24 chr7 142393005 142393252 + 0.308519316180257 NA Intergenic Intergenic -5258 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-10 chr5 90606309 90606675 + 0.308519316180257 NA intron (NM_001310656, intron 7 of 10) intron (NM_001310656, intron 7 of 10) 34035 NM_028478 73246 Mm.30172 NM_028478 ENSMUSG00000029370 Rassf6 1600016B17Rik Ras association (RalGDS/AF-6) domain family member 6 protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-7 chr17 17830427 17830672 + 0.308519316180257 NA promoter-TSS (NR_029539) promoter-TSS (NR_029539) 197 NR_029730 387248 NR_029730 ENSMUSG00000105758 Mirlet7e Mirnlet7e|mmu-let-7e microRNA let7e ncRNA unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-8 chr2 153144878 153145159 + 0.308519316180257 NA intron (NM_001172117, intron 11 of 12) intron (NM_001172117, intron 11 of 12) -16283 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-20 chr4 84637201 84637578 + 0.308519316180257 NA intron (NM_172870, intron 1 of 5) intron (NM_172870, intron 1 of 5) 37697 NM_172870 242509 Mm.190774 NM_172870 ENSMUSG00000028487 Bnc2 5031434M05Rik|8430420F16Rik basonuclin 2 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-4 chr10 95123467 95123767 + 0.308519316180257 NA intron (NR_131146, intron 3 of 3) intron (NR_131146, intron 3 of 3) 22208 NR_131146 628062 NR_131146 ENSMUSG00000112481 Gm29684 - predicted gene, 29684 ncRNA common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-8 chr18 4523192 4523477 + 0.308519316180257 NA Intergenic Intergenic -111595 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-2 chr1 77513378 77513687 + 0.308519316180257 NA intron (NM_007936, intron 1 of 17) intron (NM_007936, intron 1 of 17) 1556 NM_007936 13838 Mm.400747 NM_007936 ENSMUSG00000026235 Epha4 2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb Eph receptor A4 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-10 chr4 33261929 33262192 + 0.308519316180257 NA Intergenic Intergenic -13273 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-5 chr6 99478911 99479245 + 0.308519316180257 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) 41915 NM_001347345 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-11 chr6 112362299 112362533 + 0.308519316180257 NA intron (NM_001356365, intron 11 of 11) intron (NM_001356365, intron 11 of 11) 25607 NM_001356365 243612 Mm.122653 NM_175525 ENSMUSG00000034387 Ssu2 D630042P16Rik|Fls485|Ssuh2 ssu-2 homolog (C. elegans) protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-4 chr10 89731901 89732125 + 0.308519316180257 NA intron (NM_025914, intron 1 of 10) intron (NM_025914, intron 1 of 10) 232 NM_001359468 67019 Mm.335292 NM_025914 ENSMUSG00000019948 Actr6 2010200J04Rik|AU044443|Arp6|ArpX|CDA12 ARP6 actin-related protein 6 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257 chr1 53313309 53313547 + 0.308519316180257 NA promoter-TSS (NR_104361) promoter-TSS (NR_104361) -196 NM_001285839 72085 Mm.482256 NM_028091 ENSMUSG00000026096 Osgepl1 2610001M19Rik|AA416452 O-sialoglycoprotein endopeptidase-like 1 protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257 chr10 111512249 111512571 + 0.308519316180257 NA Intergenic Intergenic 6124 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-7 chr3 31019361 31019697 + 0.308519316180257 NA intron (NM_008857, intron 2 of 17) intron (NM_008857, intron 2 of 17) -19437 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-19 chr3 154691708 154691982 + 0.308519316180257 NA Intergenic Intergenic -19288 NM_175176 209601 Mm.331454 NM_175176 ENSMUSG00000078161 Erich3 1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133 glutamate rich 3 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-10 chr14 62332131 62332375 + 0.308519316180257 NA intron (NM_026001, intron 1 of 10) CpG 185 NM_026001 67153 Mm.26040 NM_026001 ENSMUSG00000021932 Rnaseh2b 1110019N06Rik|2610207P08Rik|Dleu8 ribonuclease H2, subunit B protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-3 chr10 84400706 84400913 + 0.308519316180257 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 39662 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-5 chr11 101448248 101448585 + 0.308519316180257 NA promoter-TSS (NM_027320) promoter-TSS (NM_027320) 4 NM_027320 70110 Mm.45558 NM_027320 ENSMUSG00000010358 Ifi35 2010008K16Rik|AW986054|IFP35|ifi-35 interferon-induced protein 35 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-17 chr4 128957347 128957565 + 0.308519316180257 NA intron (NM_001301841, intron 2 of 8) intron (NM_001301841, intron 2 of 8) 4999 NM_172875 242669 Mm.215814 NM_172875 ENSMUSG00000028789 Azin2 4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp antizyme inhibitor 2 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-13 chr3 38383340 38383613 + 0.308519316180257 NA Intergenic Intergenic 101340 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-5 chr11 116852043 116852258 + 0.308519316180257 NA exon (NM_011358, exon 2 of 3) exon (NM_011358, exon 2 of 3) 944 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-7 chr2 150904923 150905114 + 0.308519316180257 NA promoter-TSS (NM_024465) promoter-TSS (NM_024465) -287 NM_001356549 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-15 chr17 88066472 88066721 + 0.308519316180257 NA Intergenic Intergenic -1305 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-4 chr17 15024433 15024807 + 0.308519316180257 NA Intergenic Intergenic -14436 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-18 chr2 155849704 155849940 + 0.308519316180257 NA intron (NM_001355443, intron 9 of 9) intron (NM_001355443, intron 9 of 9) -14968 NM_027788 71405 Mm.260918 NM_027788 ENSMUSG00000074647 Fam83c 5530400B04Rik family with sequence similarity 83, member C protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-12 chr7 24461911 24462115 + 0.308519316180257 NA promoter-TSS (NM_011113) promoter-TSS (NM_011113) -470 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257 chr1 88526920 88527344 + 0.308519316180257 NA Intergenic Intergenic -17066 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-8 chr13 67080929 67081182 + 0.308519316180257 NA intron (NM_001012449, intron 1 of 2) intron (NM_001012449, intron 1 of 2) 490 NM_001012448 432769 Mm.458849 NM_001012325 ENSMUSG00000058883 Zfp708 Rslcan11 zinc finger protein 708 protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-5 chr19 9930908 9931274 + 0.308519316180257 NA Intergenic Intergenic -31558 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-26 chrX 136245373 136245581 + 0.308519316180257 NA intron (NM_011712, intron 1 of 2) intron (NM_011712, intron 1 of 2) 397 NM_011712 22381 Mm.512 NM_011712 ENSMUSG00000042712 Tceal9 AL024233|Wbp5 transcription elongation factor A like 9 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-6 chr11 79739529 79739720 + 0.308519316180257 NA Intergenic Intergenic 13224 NR_029959 723853 NR_029959 ENSMUSG00000065489 Mir365-2 Mirn365-2|mir-365-2 microRNA 365-2 ncRNA common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257 chr10 10555655 10555874 + 0.308519316180257 NA intron (NM_026405, intron 1 of 2) intron (NM_026405, intron 1 of 2) 2443 NM_026405 67844 Mm.31486 NM_026405 ENSMUSG00000019832 Rab32 2810011A17Rik|AU022057 RAB32, member RAS oncogene family protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-12 chr8 36689096 36689330 + 0.308519316180257 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 43841 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-7 chr8 64674658 64674885 + 0.308519316180257 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 18338 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-8 chr13 13164012 13164223 + 0.308519316180257 NA Intergenic Intergenic -18599 NM_181852 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-7 chr13 34408805 34409127 + 0.308519316180257 NA Intergenic Intergenic -63784 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-10 chrX 68495553 68496010 + 0.308519316180257 NA Intergenic Intergenic 182618 NR_033481 100038638 Mm.368431 NR_033481 ENSMUSG00000096946 Fmr1os Asfmr1|Gm10474 fragile X mental retardation syndrome 1, opposite strand ncRNA common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-11 chr16 96091237 96091522 + 0.308519316180257 NA Intergenic Intergenic -8951 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-6 chr19 55571296 55571664 + 0.308519316180257 NA intron (NM_001360431, intron 8 of 8) Charlie2b|DNA|hAT-Charlie 130724 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-6 chr13 33003489 33003879 + 0.308519316180257 NA promoter-TSS (NM_009256) promoter-TSS (NM_009256) -857 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-9 chr13 104109338 104109625 + 0.308519316180257 NA promoter-TSS (NM_001361054) promoter-TSS (NM_001361054) 133 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-9 chr19 20389160 20389396 + 0.308519316180257 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 1393 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-10 chr15 98872483 98872747 + 0.308519316180257 NA Intergenic Intergenic -1410 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-2 chr1 91249748 91250039 + 0.308519316180257 NA promoter-TSS (NM_001355761) promoter-TSS (NM_001355761) -411 NM_001355763 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-5 chr11 116854049 116854288 + 0.308519316180257 NA exon (NM_178620, exon 1 of 13) exon (NM_178620, exon 1 of 13) 168 NM_001361586 69900 Mm.348004 NM_178620 ENSMUSG00000020818 Mfsd11 2600014M03Rik major facilitator superfamily domain containing 11 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-13 chr9 92537382 92537682 + 0.308519316180257 NA Intergenic Intergenic -4691 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-8 chr3 27677200 27677532 + 0.308519316180257 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 33086 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-12 chr17 32036685 32036888 + 0.308519316180257 NA intron (NM_028244, intron 1 of 15) intron (NM_028244, intron 1 of 15) 624 NM_028244 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-6 chr2 122652543 122652851 + 0.308519316180257 NA Intergenic Intergenic 11894 NR_030547 387165 NR_030547 ENSMUSG00000076309 Mir147 Mirn147|mmu-mir-147 microRNA 147 ncRNA common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-2 chr10 17175084 17175336 + 0.308519316180257 NA Intergenic Intergenic -79428 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-6 chr8 45626080 45626279 + 0.308519316180257 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -1572 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-11 chr4 133941183 133941601 + 0.308519316180257 NA Intergenic Intergenic 26599 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-13 chr17 14961656 14961948 + 0.308519316180257 NA promoter-TSS (NM_001360983) promoter-TSS (NM_001360983) -542 NM_024250 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-5 chr12 73202161 73202389 + 0.308519316180257 NA intron (NM_008612, intron 6 of 7) intron (NM_008612, intron 6 of 7) 78558 NM_008612 17420 Mm.246750 NM_008612 ENSMUSG00000021103 Mnat1 E130115E11Rik|MAT1|P36 menage a trois 1 protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-9 chr16 97716049 97716410 + 0.308519316180257 NA Intergenic Intergenic 47526 NM_023663 72388 Mm.35290 NM_023663 ENSMUSG00000005251 Ripk4 2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4 receptor-interacting serine-threonine kinase 4 protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-2 chr11 6587580 6587924 + 0.308519316180257 NA intron (NM_146014, intron 4 of 9) intron (NM_146014, intron 4 of 9) 18302 NM_001081652 192950 Mm.337771 NM_001081652 ENSMUSG00000041073 Nacad D230024G13Rik|mKIAA0363 NAC alpha domain containing protein-coding unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-8 chr16 57671118 57671310 + 0.308519316180257 NA intron (NM_007739, intron 2 of 3) intron (NM_007739, intron 2 of 3) -64347 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-6 chr12 9112959 9113263 + 0.308519316180257 NA Intergenic Intergenic 83114 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-9 chr3 127895546 127895972 + 0.308519316180257 NA intron (NM_027482, intron 1 of 1) intron (NM_027482, intron 1 of 1) 564 NM_027482 70617 Mm.317049 NM_027482 ENSMUSG00000050549 Fam241a 2700063A17Rik|5730508B09Rik|C80506 family with sequence similarity 241, member A protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-3 chr11 68089651 68089941 + 0.308519316180257 NA intron (NM_018768, intron 6 of 7) intron (NM_018768, intron 6 of 7) 123338 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-16 chr3 132876694 132877004 + 0.308519316180257 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 1747 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-3 chr10 44877958 44878180 + 0.308519316180257 NA Intergenic Intergenic -189145 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-5 chr17 36002757 36002960 + 0.308519316180257 NA intron (NR_015618, intron 1 of 1) ID_B1|SINE|B4 8354 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-11 chr4 127126146 127126406 + 0.308519316180257 NA intron (NM_001099319, intron 1 of 2) intron (NM_001099319, intron 1 of 2) 233 NM_001099319 100039968 Mm.392655 NM_001099319 ENSMUSG00000070737 Tmem35b Gm12942|Zmym6nb transmembrane protein 35B protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-4 chr14 7869146 7869382 + 0.308519316180257 NA intron (NM_001081427, intron 2 of 45) intron (NM_001081427, intron 2 of 45) 51307 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-9 chr9 111312291 111312671 + 0.308519316180257 NA intron (NM_001164659, intron 1 of 21) CpG 742 NM_001164659 320429 Mm.270754 NM_001164659 ENSMUSG00000062296 Trank1 A230061D21Rik|C030048J01Rik|Gm187|Lba1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-21 chr6 30509900 30510234 + 0.308519316180257 NA promoter-TSS (NM_178625) promoter-TSS (NM_178625) 218 NM_027073 75647 Mm.46117 NM_027073 ENSMUSG00000029784 Ssmem1 1700016K02Rik|1700025E21Rik serine-rich single-pass membrane protein 1 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-2 chr10 24459331 24459633 + 0.308519316180257 NA Intergenic Intergenic -135960 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-8 chr9 44735886 44736207 + 0.308519316180257 NA promoter-TSS (NM_153537) promoter-TSS (NM_153537) -848 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-16 chr2 51305029 51305335 + 0.308519316180257 NA Intergenic Intergenic 63351 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-10 chr4 105898610 105898890 + 0.308519316180257 NA Intergenic Intergenic -342463 NR_151521 105244641 Mm.404914 NR_151521 Gm12724 - predicted gene 12724 ncRNA common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-14 chr8 45529342 45529568 + 0.308519316180257 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) 21667 NM_001205219 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-14 chr3 87161584 87161804 + 0.308519316180257 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 13053 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding unique_peak2_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-3 chr11 51919844 51920141 + 0.308519316180257 NA Intergenic Intergenic -47639 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257 chr1 16620914 16621278 + 0.308519316180257 NA Intergenic Intergenic -1758 NM_001271017 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-3 chr10 66354501 66354718 + 0.308519316180257 NA Intergenic Intergenic 209313 NR_131070 77198 Mm.107617 NR_131070 ENSMUSG00000112210 4930407I19Rik - RIKEN cDNA 4930407I19 gene ncRNA unique_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-7 chr13 23543074 23543308 + 0.308519316180257 NA promoter-TSS (NM_013548) promoter-TSS (NM_013548) 253 NM_178197 319182 Mm.352273 NM_178197 ENSMUSG00000114456 Hist1h2bh H2b-221 histone cluster 1, H2bh protein-coding common_peak2_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-13 chr6 146576953 146577285 + 0.308519316180257 NA promoter-TSS (NM_001347513) promoter-TSS (NM_001347513) 716 NM_001362108 71177 Mm.271774 NM_138757 ENSMUSG00000040250 Ints13 4933424B01Rik|Asun|Spata30 integrator complex subunit 13 protein-coding common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-23 chr6 147200395 147200681 + 0.308519316180257 NA intron (NR_033640, intron 2 of 2) intron (NR_033640, intron 2 of 2) 20297 NR_033640 100039641 Mm.170402 NR_033640 ENSMUSG00000085600 E330012B07Rik Gm15768 RIKEN cDNA E330012B07 gene ncRNA common_peak1_17_14_-0.00812436736256972_3.90282841192723_0.308519316180257-12 chr17 7100971 7101226 + 0.308519316180257 NA Intergenic Intergenic -69017 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-6 chr15 76381233 76381512 + 0.308519316180257 NA intron (NM_175457, intron 1 of 43) intron (NM_175457, intron 1 of 43) 859 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding unique_peak1_16_15_-0.183114163090304_3.90844291845485_0.308519316180257-11 chr8 31599322 31599588 + 0.308519316180257 NA Intergenic Intergenic 231706 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_71_57_0.0266752739718887_5.87131863211352_0.308518202581802 chr10 39369822 39370426 + 0.308518202581802 NA 5' UTR (NM_001122892, exon 1 of 13) 5' UTR (NM_001122892, exon 1 of 13) 325 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_69_59_-0.0625895826359599_5.87559580429054_0.308518202581802 chr17 25115050 25115990 + 0.308518202581802 NA 5' UTR (NM_001163661, exon 1 of 21) 5' UTR (NM_001163661, exon 1 of 21) 385 NM_027880 71718 Mm.288702 NM_027880 ENSMUSG00000024170 Telo2 1200003M09Rik|AI415602|Tel2|mKIAA0683 telomere maintenance 2 protein-coding common_peak1_68_59_-0.0832016915848097_5.86528974981611_0.308518202581802-2 chr19 38930528 38931210 + 0.308518202581802 NA promoter-TSS (NM_008234) promoter-TSS (NM_008234) -121 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak2_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-6 chr7 143599271 143600021 + 0.308518202581802 NA intron (NM_013742, intron 1 of 22) intron (NM_013742, intron 1 of 22) 444 NM_001252593 27267 Mm.125659 NM_013742 ENSMUSG00000010755 Cars CA3 cysteinyl-tRNA synthetase protein-coding common_peak1_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-6 chrX 162760497 162761394 + 0.308518202581802 NA intron (NM_009031, intron 1 of 11) CpG 573 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7, chromatin remodeling factor protein-coding common_peak2_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-5 chr7 34132429 34133064 + 0.308518202581802 NA exon (NM_207212, exon 1 of 8) exon (NM_207212, exon 1 of 8) 522 NM_207212 101543 Mm.422738 NM_207212 ENSMUSG00000036459 Wtip - WT1-interacting protein protein-coding common_peak1_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-5 chr5 92811742 92812915 + 0.308518202581802 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 2946 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-2 chr13 63431524 63432022 + 0.308518202581802 NA promoter-TSS (NM_001042673) promoter-TSS (NM_001042673) -28 NM_001282942 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding common_peak2_68_59_-0.0832016915848097_5.86528974981611_0.308518202581802 chr9 110686293 110687252 + 0.308518202581802 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 30269 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_69_59_-0.0625895826359599_5.87559580429054_0.308518202581802-2 chr8 119394945 119395663 + 0.308518202581802 NA exon (NM_019966, exon 1 of 5) exon (NM_019966, exon 1 of 5) 412 NM_019966 56690 Mm.423037 NM_019966 ENSMUSG00000074064 Mlycd AI324784|Mcd malonyl-CoA decarboxylase protein-coding common_peak1_68_59_-0.0832016915848097_5.86528974981611_0.308518202581802 chr18 67774994 67775583 + 0.308518202581802 NA TTS (NR_045376) TTS (NR_045376) 412 NM_028112 72124 Mm.307315 NM_028112 ENSMUSG00000079614 Seh1l 2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1 SEH1-like (S. cerevisiae protein-coding common_peak2_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-3 chr3 133091751 133092466 + 0.308518202581802 NA promoter-TSS (NM_026231) promoter-TSS (NM_026231) -69 NM_001356309 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-4 chr6 134566916 134567448 + 0.308518202581802 NA promoter-TSS (NM_008514) promoter-TSS (NM_008514) -269 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak1_71_57_0.0266752739718887_5.87131863211352_0.308518202581802 chr1 165642404 165643146 + 0.308518202581802 NA Intergenic Intergenic -8234 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding common_peak1_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-4 chr2 39064937 39066013 + 0.308518202581802 NA promoter-TSS (NM_029793) promoter-TSS (NM_029793) 66 NR_110968 76899 Mm.131098 NM_029793 ENSMUSG00000026754 Golga1 0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97 golgi autoantigen, golgin subfamily a, 1 protein-coding common_peak1_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-2 chr13 98819297 98820125 + 0.308518202581802 NA Intergenic Intergenic -4262 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak1_71_57_0.0266752739718887_5.87131863211352_0.308518202581802-3 chr18 38211147 38211978 + 0.308518202581802 NA Intergenic CpG -1800 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_157_132_-0.0447697487991574_7.03289756110161_0.30851799644699 chr15 77910825 77912388 + 0.30851799644699 NA Intergenic MIR|SINE|MIR 17388 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_886_708_0.0123205040809609_9.47580206928_0.308507337701706 chr19 4213837 4217714 + 0.308507337701706 NA 5' UTR (NM_001310038, exon 2 of 4) 5' UTR (NM_001310038, exon 2 of 4) 1386 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak2_288_231_0.0175307161810467_7.8667463532181_0.308485786482452 chr2 167542568 167544897 + 0.308485786482452 NA TTS (NM_011427) TTS (NM_011427) 5537 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_162_130_0.0217199881869741_7.04428299563094_0.30846105099584 chr19 53902517 53904424 + 0.30846105099584 NA 5' UTR (NM_001168492, exon 1 of 13) 5' UTR (NM_001168492, exon 1 of 13) 119 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_70_60_-0.0661165958561556_5.89767903963481_0.308391271559909 chr1 71653485 71654213 + 0.308391271559909 NA promoter-TSS (NM_001276410) promoter-TSS (NM_001276410) 514 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak2_70_60_-0.0661165958561556_5.89767903963481_0.308391271559909-2 chr8 70765016 70765883 + 0.308391271559909 NA intron (NM_023065, intron 1 of 7) intron (NM_023065, intron 1 of 7) 1214 NM_023065 65972 Mm.30241 NM_023065 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak1_70_60_-0.0661165958561556_5.89767903963481_0.308391271559909-2 chr4 45408035 45409029 + 0.308391271559909 NA intron (NM_001009949, intron 1 of 2) CpG 234 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_70_60_-0.0661165958561556_5.89767903963481_0.308391271559909 chr2 109695171 109696122 + 0.308391271559909 NA intron (NM_001285417, intron 1 of 1) AT_rich|Low_complexity|Low_complexity 1237 NM_001285417 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak1_72_58_0.0217723862040851_5.89352924246388_0.308391271559897-3 chr18 32240104 32241033 + 0.308391271559897 NA intron (NM_133658, intron 1 of 14) intron (NM_133658, intron 1 of 14) 237 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding common_peak2_72_58_0.0217723862040851_5.89352924246388_0.308391271559897 chr17 31983159 31983955 + 0.308391271559897 NA intron (NM_028902, intron 7 of 7) intron (NM_028902, intron 7 of 7) 50951 NM_028902 74377 Mm.75856 NM_028902 ENSMUSG00000002076 Hsf2bp 4932437G14Rik heat shock transcription factor 2 binding protein protein-coding common_peak1_72_58_0.0217723862040851_5.89352924246388_0.308391271559897 chr10 19592038 19592535 + 0.308391271559897 NA intron (NM_010511, intron 1 of 6) CpG 337 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_72_58_0.0217723862040851_5.89352924246388_0.308391271559897-2 chr16 13671980 13672608 + 0.308391271559897 NA intron (NM_001177552, intron 1 of 5) CpG 436 NM_025653 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding common_peak1_72_58_0.0217723862040851_5.89352924246388_0.308391271559897-5 chr2 125505039 125506073 + 0.308391271559897 NA exon (NM_007993, exon 2 of 66) exon (NM_007993, exon 2 of 66) 882 NM_007993 14118 Mm.271644 NM_007993 ENSMUSG00000027204 Fbn1 AI536462|B430209H23|Fib-1|Tsk fibrillin 1 protein-coding common_peak1_72_58_0.0217723862040851_5.89352924246388_0.308391271559897-4 chr2 90565466 90566496 + 0.308391271559897 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 14666 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_71_61_-0.0695400412874143_5.91942628974317_0.308268572170095-3 chr5 134183863 134184522 + 0.308268572170095 NA 5' UTR (NM_053266, exon 1 of 16) 5' UTR (NM_053266, exon 1 of 16) 154 NM_053266 114674 Mm.218744 NM_053266 ENSMUSG00000015942 Gtf2ird2 1700012P16Rik GTF2I repeat domain containing 2 protein-coding common_peak2_71_61_-0.0695400412874143_5.91942628974317_0.308268572170095-4 chr8 123883869 123884655 + 0.308268572170095 NA Intergenic Intergenic 10513 NM_001272041 11459 Mm.214950 NM_009606 ENSMUSG00000031972 Acta1 AA959943|Acta-2|Acts|Actsk-1 actin, alpha 1, skeletal muscle protein-coding common_peak1_71_61_-0.0695400412874143_5.91942628974317_0.308268572170095 chr17 24936528 24937379 + 0.308268572170095 NA promoter-TSS (NM_001163447) promoter-TSS (NM_001163447) 24 NM_001163448 30957 Mm.43081 NM_013931 ENSMUSG00000024163 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 protein-coding common_peak2_71_61_-0.0695400412874143_5.91942628974317_0.308268572170095-2 chr11 45851641 45852518 + 0.308268572170095 NA 5' UTR (NM_001346760, exon 1 of 12) 5' UTR (NM_001346760, exon 1 of 12) 115 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding common_peak2_71_61_-0.0695400412874143_5.91942628974317_0.308268572170095 chr1 74274542 74275226 + 0.308268572170095 NA Intergenic Intergenic -3716 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak2_73_59_0.0170151658756792_5.91539817854636_0.30826857217007-3 chr9 108347520 108348355 + 0.30826857217007 NA exon (NM_001311157, exon 1 of 21) exon (NM_001311157, exon 1 of 21) 106 NM_011678 22258 Mm.3974 NM_011678 ENSMUSG00000032612 Usp4 F730026I20Rik|Unp|mKIAA4155 ubiquitin specific peptidase 4 (proto-oncogene) protein-coding common_peak2_73_59_0.0170151658756792_5.91539817854636_0.30826857217007 chr1 177795842 177796474 + 0.30826857217007 NA intron (NM_007422, intron 1 of 12) CpG 351 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak2_73_59_0.0170151658756792_5.91539817854636_0.30826857217007-2 chr15 25395577 25396272 + 0.30826857217007 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 17840 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_73_59_0.0170151658756792_5.91539817854636_0.30826857217007 chr10 22730441 22731351 + 0.30826857217007 NA intron (NM_011603, intron 1 of 6) CpG 551 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak1_292_242_-0.029609528888412_7.91000773916157_0.308268320807282 chr12 80258533 80260138 + 0.308268320807282 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 1036 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_295_244_-0.0268421366648628_7.92321687067014_0.308208498570693 chr15 98532360 98534269 + 0.308208498570693 NA intron (NR_153345, intron 2 of 10) RSINE1|SINE|B4 955 NM_001359827 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak2_168_135_0.0194635042956035_7.09719459339814_0.308188840000872 chr8 70539432 70540357 + 0.308188840000872 NA intron (NM_007924, intron 1 of 11) CpG 219 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak2_301_241_0.0196796874091998_7.92870308097919_0.308178956738186 chr1 58713160 58715329 + 0.308178956738186 NA TTS (NR_149256) TTS (NR_149256) 958 NM_001355056 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785-3 chr15 10748639 10749813 + 0.308149896260785 NA intron (NR_045063, intron 2 of 6) intron (NR_045063, intron 2 of 6) 34326 NR_045065 75259 Mm.33928 NR_045063 ENSMUSG00000096971 4930556M19Rik 1700009D01Rik|C130022M03Rik RIKEN cDNA 4930556M19 gene ncRNA common_peak2_74_60_0.0123971268168761_5.93693590097132_0.308149896260785-2 chr9 21167997 21168536 + 0.308149896260785 NA intron (NM_183408, intron 1 of 14) intron (NM_183408, intron 1 of 14) 2552 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785-6 chr3 19428995 19429858 + 0.308149896260785 NA Intergenic Intergenic -79169 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak1_74_60_0.0123971268168761_5.93693590097132_0.308149896260785-3 chr2 116978749 116980029 + 0.308149896260785 NA Intergenic Intergenic 79237 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785-4 chr17 13760631 13761700 + 0.308149896260785 NA intron (NR_151731, intron 1 of 33) CpG 229 NM_022311 21646 Mm.486358 NM_022311 ENSMUSG00000038347 Tcte2 AI429268|Tcte-2 t-complex-associated testis expressed 2 protein-coding common_peak1_74_60_0.0123971268168761_5.93693590097132_0.308149896260785-4 chr7 30562362 30563129 + 0.308149896260785 NA promoter-TSS (NM_170760) promoter-TSS (NM_170760) 439 NM_025498 66340 Mm.86557 NM_025498 ENSMUSG00000036835 Psenen 1700023M09Rik|Pen-2 presenilin enhancer gamma secretase subunit protein-coding common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785 chr1 59482294 59483241 + 0.308149896260785 NA 5' UTR (NM_008057, exon 1 of 1) 5' UTR (NM_008057, exon 1 of 1) 620 NM_008057 14369 Mm.297906 NM_008057 ENSMUSG00000041075 Fzd7 Fz7 frizzled class receptor 7 protein-coding common_peak1_74_60_0.0123971268168761_5.93693590097132_0.308149896260785 chr1 158604273 158605401 + 0.308149896260785 NA intron (NM_007495, intron 14 of 22) intron (NM_007495, intron 14 of 22) 99212 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785-7 chr9 64022438 64022961 + 0.308149896260785 NA promoter-TSS (NM_008542) promoter-TSS (NM_008542) -640 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785-2 chr1 118389593 118390260 + 0.308149896260785 NA intron (NM_001359330, intron 1 of 39) intron (NM_001359330, intron 1 of 39) 868 NM_001359334 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak2_74_60_0.0123971268168761_5.93693590097132_0.308149896260785 chr11 31671134 31671812 + 0.308149896260785 NA intron (NM_001024919, intron 1 of 3) CpG 389 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_75_60_0.0313711374090158_5.94642290626739_0.308149896260785-5 chr17 25188025 25188919 + 0.308149896260785 NA promoter-TSS (NM_001197024) promoter-TSS (NM_001197024) 72 NM_001197024 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak1_74_60_0.0123971268168761_5.93693590097132_0.308149896260785-2 chr13 99383663 99384873 + 0.308149896260785 NA intron (NM_173757, intron 4 of 10) ID2|SINE|ID 28558 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA common_peak1_75_60_0.0313711374090158_5.94642290626739_0.308149896260785 chr11 58938151 58938850 + 0.308149896260785 NA exon (NM_022423, exon 1 of 4) exon (NM_022423, exon 1 of 4) 406 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak2_72_62_-0.0728644879339901_5.94084767953292_0.30814989626076-2 chr5 24404335 24405139 + 0.30814989626076 NA intron (NM_029020, intron 9 of 15) intron (NM_029020, intron 9 of 15) -8714 NM_183000 171209 Mm.299636 NM_183000 ENSMUSG00000038276 Asic3 AW742291|Accn3|DRASIC|SLNAC1|TNAC1 acid-sensing (proton-gated) ion channel 3 protein-coding common_peak2_72_62_-0.0728644879339901_5.94084767953292_0.30814989626076 chr12 4906941 4907633 + 0.30814989626076 NA intron (NM_145441, intron 1 of 6) CpG 233 NM_145441 217379 Mm.259170 NM_145441 ENSMUSG00000020634 Ubxn2a 6330407P03Rik|Ubxd4 UBX domain protein 2A protein-coding common_peak1_72_62_-0.0728644879339901_5.94084767953292_0.30814989626076 chr11 79711034 79711800 + 0.30814989626076 NA promoter-TSS (NR_029579) promoter-TSS (NR_029579) -552 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA common_peak1_72_62_-0.0728644879339901_5.94084767953292_0.30814989626076-2 chr5 100622042 100623085 + 0.30814989626076 NA Intergenic Intergenic -50358 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_167_140_-0.0411266155259016_7.11898804463584_0.308085459115553 chr8 64657556 64659271 + 0.308085459115553 NA intron (NM_013494, intron 1 of 8) intron (NM_013494, intron 1 of 8) 34696 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-3 chr10 128092419 128092618 + 0.308035960714963 NA promoter-TSS (NM_054078) promoter-TSS (NM_054078) -265 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-9 chr2 116066565 116067014 + 0.308035960714963 NA promoter-TSS (NR_153841) promoter-TSS (NR_153841) -436 NR_153841 654793 Mm.448948 NR_153841 G630016G05Rik - RIKEN cDNA G630016G05 gene ncRNA common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-10 chr15 79528726 79528931 + 0.308035960714963 NA 3' UTR (NM_152806, exon 2 of 2) 3' UTR (NM_152806, exon 2 of 2) 4089 NM_152806 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-9 chr6 31092996 31093400 + 0.308035960714963 NA TTS (NR_110471) TTS (NR_110471) -30105 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-19 chr7 44896443 44896674 + 0.308035960714963 NA exon (NM_027376, exon 2 of 11) exon (NM_027376, exon 2 of 11) 479 NM_027376 70300 Mm.276298 NM_027376 ENSMUSG00000011658 Fuz 2600013E07Rik|b2b1273Clo fuzzy planar cell polarity protein protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-16 chr9 69472662 69472878 + 0.308035960714963 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 15826 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-4 chr1 172309922 172310177 + 0.308035960714963 NA Intergenic Intergenic -2318 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-5 chr17 24707141 24707481 + 0.308035960714963 NA intron (NM_145396, intron 1 of 21) intron (NM_145396, intron 1 of 21) 342 NM_145396 213773 Mm.100353 NM_145396 ENSMUSG00000040688 Tbl3 9430070M15Rik transducin (beta)-like 3 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-15 chr7 66177213 66177478 + 0.308035960714963 NA Intergenic Intergenic 67830 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-3 chr1 87852738 87853047 + 0.308035960714963 NA promoter-TSS (NM_177646) promoter-TSS (NM_177646) -395 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-12 chr18 60648576 60648948 + 0.308035960714963 NA Intergenic Intergenic -14648 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-12 chr7 100951060 100951313 + 0.308035960714963 NA intron (NM_183168, intron 1 of 2) intron (NM_183168, intron 1 of 2) 13180 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-4 chr16 4558156 4558487 + 0.308035960714963 NA intron (NM_031182, intron 1 of 6) intron (NM_031182, intron 1 of 6) 1399 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-5 chr11 99558222 99558492 + 0.308035960714963 NA Intergenic Intergenic -1504 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-20 chr8 9205287 9205619 + 0.308035960714963 NA TTS (NM_173446) TTS (NM_173446) 60784 NR_073360 74688 Mm.159298 NR_073360 ENSMUSG00000109215 4930453L07Rik - RIKEN cDNA 4930453L07 gene ncRNA unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-6 chr18 16745014 16745220 + 0.308035960714963 NA intron (NM_007664, intron 2 of 15) intron (NM_007664, intron 2 of 15) 64129 NM_007664 12558 Mm.257437 NM_007664 ENSMUSG00000024304 Cdh2 CDHN|N-CAD|Ncad cadherin 2 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-17 chr5 24907702 24908056 + 0.308035960714963 NA intron (NM_001310480, intron 3 of 13) CpG 630 NM_001170556 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-3 chr15 51991982 51992220 + 0.308035960714963 NA promoter-TSS (NM_009009) promoter-TSS (NM_009009) -341 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-19 chr9 111273085 111273394 + 0.308035960714963 NA exon (NM_175266, exon 1 of 1) exon (NM_175266, exon 1 of 1) 1394 NM_175266 77781 Mm.209005 NM_175266 ENSMUSG00000046785 Epm2aip1 A930003G21Rik|mKIAA0766 EPM2A (laforin) interacting protein 1 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-11 chr4 155133449 155133731 + 0.308035960714963 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 46986 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-4 chr16 91961934 91962177 + 0.308035960714963 NA Intergenic Intergenic -30425 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-9 chr14 79480327 79480631 + 0.308035960714963 NA promoter-TSS (NM_007920) promoter-TSS (NM_007920) -715 NM_007920 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-14 chr7 13039186 13039560 + 0.308035960714963 NA Intergenic B1F|SINE|Alu -1098 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963 chr1 91353507 91353921 + 0.308035960714963 NA exon (NM_027551, exon 2 of 8) exon (NM_027551, exon 2 of 8) 2641 NM_027551 70788 Mm.68617 NM_027551 ENSMUSG00000026308 Klhl30 4631423F02Rik kelch-like 30 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-2 chr13 73680826 73681100 + 0.308035960714963 NA 3' UTR (NM_028878, exon 12 of 12) 3' UTR (NM_028878, exon 12 of 12) -2940 NM_001168643 22598 Mm.30370 NM_011730 ENSMUSG00000021612 Slc6a18 B0AT3|D630001K16Rik|Xt2|Xtrp2 solute carrier family 6 (neurotransmitter transporter), member 18 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-7 chr13 31468443 31468712 + 0.308035960714963 NA Intergenic Intergenic -89593 NM_008239 15220 Mm.44235 NM_008239 ENSMUSG00000038415 Foxq1 HFH-1|Hfh1|Hfh1l|sa forkhead box Q1 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-18 chr5 149623165 149623384 + 0.308035960714963 NA intron (NM_001347534, intron 11 of 16) intron (NM_001347534, intron 11 of 16) 13041 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-15 chr3 121969454 121969735 + 0.308035960714963 NA intron (NM_001356524, intron 1 of 22) intron (NM_001356524, intron 1 of 22) 1788 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-10 chr3 144668696 144669211 + 0.308035960714963 NA Intergenic MLT1D|LTR|ERVL-MaLR 51382 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-13 chr5 135961014 135961360 + 0.308035960714963 NA exon (NM_001160366, exon 11 of 11) exon (NM_001160366, exon 11 of 11) 13289 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-4 chr11 98932614 98932899 + 0.308035960714963 NA Intergenic Intergenic -4940 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-11 chrX 106011434 106011680 + 0.308035960714963 NA intron (NM_025952, intron 1 of 10) CpG 342 NM_001190409 67075 Mm.275943 NM_025952 ENSMUSG00000031232 Magt1 2410001C15Rik|2610529C04Rik|2810482I07Rik|IAG2|IAP magnesium transporter 1 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-13 chr9 57910428 57910707 + 0.308035960714963 NA promoter-TSS (NM_001122873) promoter-TSS (NM_001122873) -419 NM_027086 69459 Mm.41735 NM_027086 ENSMUSG00000055720 Ubl7 2300004C15Rik ubiquitin-like 7 (bone marrow stromal cell-derived) protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-12 chr5 104434629 104434881 + 0.308035960714963 NA promoter-TSS (NM_001204202) promoter-TSS (NM_001204202) -356 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-21 chr9 58296244 58296490 + 0.308035960714963 NA intron (NM_010729, intron 2 of 6) intron (NM_010729, intron 2 of 6) 16845 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-9 chr3 122086102 122086465 + 0.308035960714963 NA intron (NM_007378, intron 9 of 49) B3|SINE|B2 41823 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963 chr1 64929438 64929689 + 0.308035960714963 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 27261 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-8 chr2 35478915 35479165 + 0.308035960714963 NA Intergenic Intergenic -17591 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-11 chr18 36448866 36449295 + 0.308035960714963 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 5415 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-2 chr10 93288114 93288504 + 0.308035960714963 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 22850 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-6 chr2 168073542 168073816 + 0.308035960714963 NA Intergenic Intergenic -7325 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-7 chr2 9878817 9879170 + 0.308035960714963 NA promoter-TSS (NM_008091) promoter-TSS (NM_008091) -393 NM_001355112 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-16 chr3 145899249 145899642 + 0.308035960714963 NA Intergenic PB1D7|SINE|Alu -24817 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-8 chr13 108603936 108604233 + 0.308035960714963 NA Intergenic Intergenic -50093 NM_011056 238871 Mm.434429 NM_011056 ENSMUSG00000021699 Pde4d 9630011N22Rik|Dpde3 phosphodiesterase 4D, cAMP specific protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-11 chr5 36188755 36189025 + 0.308035960714963 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -15131 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-2 chr1 83100089 83100391 + 0.308035960714963 NA Intergenic Intergenic -16526 NM_016960 20297 Mm.116739 NM_016960 ENSMUSG00000026166 Ccl20 CKb4|LARC|MIP-3A|MIP-3[a]|MIP3A|ST38|Scya20|exodus-1 chemokine (C-C motif) ligand 20 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-3 chr15 99294649 99294916 + 0.308035960714963 NA promoter-TSS (NM_018786) promoter-TSS (NM_018786) -459 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-18 chr9 104321040 104321282 + 0.308035960714963 NA intron (NM_207668, intron 4 of 10) intron (NM_207668, intron 4 of 10) 16561 NM_019807 56318 Mm.19941 NM_019807 ENSMUSG00000032561 Acpp 5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal acid phosphatase, prostate protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-6 chr11 103967711 103968007 + 0.308035960714963 NA intron (NM_007477, intron 1 of 4) intron (NM_007477, intron 1 of 4) 988 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-6 chr18 65325520 65325825 + 0.308035960714963 NA intron (NM_001037294, intron 4 of 12) intron (NM_001037294, intron 4 of 12) 68216 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-7 chr4 107375260 107375673 + 0.308035960714963 NA intron (NM_028355, intron 5 of 17) intron (NM_028355, intron 5 of 17) 7682 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-2 chr1 90676615 90676917 + 0.308035960714963 NA Intergenic Intergenic 73341 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-5 chr15 36182525 36182736 + 0.308035960714963 NA intron (NM_012031, intron 2 of 18) intron (NM_012031, intron 2 of 18) 3100 NM_012031 26942 Mm.295539 NM_012031 ENSMUSG00000037617 Spag1 tpis sperm associated antigen 1 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-7 chr18 52637459 52637845 + 0.308035960714963 NA intron (NM_001360984, intron 3 of 3) intron (NM_001360984, intron 3 of 3) -8568 NM_030097 78414 Mm.273327 NM_030097 ENSMUSG00000024532 1700034E13Rik - RIKEN cDNA 1700034E13 gene protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-14 chr2 117673688 117674031 + 0.308035960714963 NA Intergenic Intergenic 138943 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-5 chr2 163811987 163812424 + 0.308035960714963 NA Intergenic Intergenic -8629 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-8 chr3 51721326 51721662 + 0.308035960714963 NA intron (NM_001004176, intron 2 of 4) intron (NM_001004176, intron 2 of 4) 60315 NM_001310482 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-8 chr5 149320456 149320920 + 0.308035960714963 NA Intergenic Intergenic 55684 NM_009663 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-13 chr18 60895396 60895752 + 0.308035960714963 NA Intergenic Intergenic -16666 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding unique_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963 chr1 20415146 20415542 + 0.308035960714963 NA intron (NM_153179, intron 36 of 66) intron (NM_153179, intron 36 of 66) 58890 NR_045734 75028 Mm.417820 NR_045734 ENSMUSG00000089914 4930486I03Rik - RIKEN cDNA 4930486I03 gene ncRNA common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-10 chr2 152679971 152680264 + 0.308035960714963 NA intron (NM_010376, intron 2 of 11) intron (NM_010376, intron 2 of 11) -7031 NM_025543 66405 Mm.440291 NM_025543 ENSMUSG00000042814 Mcts2 2400002F11Rik|MCT-2 malignant T cell amplified sequence 2 protein-coding common_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-17 chr9 102647564 102647894 + 0.308035960714963 NA Intergenic Intergenic 21433 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding unique_peak1_17_16_-0.18869661300439_3.99311453474814_0.308035960714963-10 chr9 57989613 57989942 + 0.308035960714963 NA Intergenic Intergenic -8247 NM_001346787 13070 Mm.302865 NM_019779 ENSMUSG00000032323 Cyp11a1 Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc cytochrome P450, family 11, subfamily a, polypeptide 1 protein-coding common_peak2_17_16_-0.18869661300439_3.99311453474814_0.308035960714963 chr1 7089460 7089689 + 0.308035960714963 NA intron (NM_183028, intron 1 of 5) intron (NM_183028, intron 1 of 5) 654 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-4 chr13 104023675 104023942 + 0.30803596071496 NA 3' UTR (NM_029447, exon 13 of 13) 3' UTR (NM_029447, exon 13 of 13) 85806 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-20 chr7 4996563 4996760 + 0.30803596071496 NA promoter-TSS (NM_026741) promoter-TSS (NM_026741) -560 NM_026741 68490 Mm.76400 NM_026741 ENSMUSG00000051550 Zfp579 1110003A17Rik|Znf579 zinc finger protein 579 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-3 chr15 25842631 25842919 + 0.30803596071496 NA promoter-TSS (NM_001034851) promoter-TSS (NM_001034851) -523 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Retreg1 1810015C04Rik|AU015349|Fam134b|Retreg1d reticulophagy regulator 1 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-7 chr19 45560746 45560956 + 0.30803596071496 NA promoter-TSS (NM_020032) promoter-TSS (NM_020032) 266 NM_172639 226162 Mm.21978 NM_172639 ENSMUSG00000041035 Dpcd Ndac deleted in primary ciliary dyskinesia protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496 chr1 59999761 59999978 + 0.30803596071496 NA intron (NM_001357296, intron 9 of 10) intron (NM_001357296, intron 9 of 10) 43253 NM_001357296 70375 Mm.17834 NM_027407 ENSMUSG00000026018 Ica1l 1700030B17Rik|Als2cr15|b2b3465Clo islet cell autoantigen 1-like protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-2 chr10 62486403 62486712 + 0.30803596071496 NA promoter-TSS (NM_001113355) promoter-TSS (NM_001113355) 41 NM_001113355 30930 Mm.260703 NM_133672 ENSMUSG00000020078 Vps26a AA407240|HB58|Vps26 VPS26 retromer complex component A protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-9 chr6 38533681 38533907 + 0.30803596071496 NA Intergenic Intergenic -1067 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-17 chr5 142367453 142367662 + 0.30803596071496 NA Intergenic CpG -33940 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-6 chr16 4597313 4597519 + 0.30803596071496 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 2703 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-22 chr7 89623011 89623224 + 0.30803596071496 NA Intergenic Intergenic -9701 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-11 chr7 45706202 45706452 + 0.30803596071496 NA intron (NM_016974, intron 1 of 3) intron (NM_016974, intron 1 of 3) 1080 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-7 chr18 46524302 46524520 + 0.30803596071496 NA exon (NM_173423, exon 2 of 3) exon (NM_173423, exon 2 of 3) 1560 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-6 chr15 101174248 101174462 + 0.30803596071496 NA intron (NM_007395, intron 1 of 8) CpG 283 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ALK-4|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-9 chr2 113456119 113456384 + 0.30803596071496 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 15187 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-9 chr4 43982206 43982472 + 0.30803596071496 NA Intergenic Intergenic -1165 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-21 chr7 67471160 67471576 + 0.30803596071496 NA Intergenic Intergenic -98510 NM_001357324 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-2 chr11 59228678 59229049 + 0.30803596071496 NA promoter-TSS (NM_001130408) promoter-TSS (NM_001130408) -596 NM_007476 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-5 chr13 64274466 64274705 + 0.30803596071496 NA intron (NM_172587, intron 1 of 13) CpG 403 NM_172587 218294 Mm.25335 NM_172587 ENSMUSG00000033102 Cdc14b 2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1 CDC14 cell division cycle 14B protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-12 chr9 66593307 66593540 + 0.30803596071496 NA promoter-TSS (NM_001302116) promoter-TSS (NM_001302116) -308 NM_001302116 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-5 chr17 5575484 5575721 + 0.30803596071496 NA intron (NM_146073, intron 1 of 8) intron (NM_146073, intron 1 of 8) 83002 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-6 chr17 79020103 79020355 + 0.30803596071496 NA intron (NM_001171004, intron 1 of 18) intron (NM_001171004, intron 1 of 18) 587 NM_001171004 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-11 chr2 148187566 148187953 + 0.30803596071496 NA Intergenic Intergenic -140790 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-4 chr16 23422420 23422665 + 0.30803596071496 NA Intergenic B1_Mus1|SINE|Alu -6591 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-4 chr11 98782949 98783213 + 0.30803596071496 NA Intergenic Intergenic -7704 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-23 chr7 126695377 126695581 + 0.30803596071496 NA promoter-TSS (NM_175103) promoter-TSS (NM_175103) 304 NM_029420 75764 Mm.280573 NM_029420 ENSMUSG00000059772 Slx1b 1110030E23Rik|2410170E21Rik|4833422P03Rik|AI853643|Giyd1|Giyd2 SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-14 chr9 102784144 102784414 + 0.30803596071496 NA Intergenic Intergenic 44631 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-10 chr5 105110464 105110713 + 0.30803596071496 NA promoter-TSS (NR_153378) promoter-TSS (NR_153378) -296 NM_172777 236573 Mm.425261 NM_172777 ENSMUSG00000029298 Gbp9 - guanylate-binding protein 9 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-18 chr6 54279594 54279822 + 0.30803596071496 NA intron (NM_001163640, intron 7 of 12) intron (NM_001163640, intron 7 of 12) 6886 NM_023543 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-25 chr9 96119476 96119682 + 0.30803596071496 NA exon (NM_177352, exon 1 of 17) exon (NM_177352, exon 1 of 17) 150 NM_177352 235533 Mm.213651 NM_177352 ENSMUSG00000041440 Gk5 AV095337|C330018K18Rik|G630067D24Rik glycerol kinase 5 (putative) protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-16 chr5 91282670 91282886 + 0.30803596071496 NA intron (NR_040428, intron 1 of 5) intron (NR_040428, intron 1 of 5) 298 NR_040428 100503265 Mm.125059 NR_040428 ENSMUSG00000107198 Gm19619 - predicted gene, 19619 ncRNA unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-11 chr9 57638200 57638551 + 0.30803596071496 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 7278 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-8 chr4 135434018 135434453 + 0.30803596071496 NA promoter-TSS (NM_022980) promoter-TSS (NM_022980) -430 NM_022980 53902 Mm.331970 NM_022980 ENSMUSG00000059713 Rcan3 AU041093|Csp3|Dscr1l2 regulator of calcineurin 3 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-10 chr2 117804191 117804388 + 0.30803596071496 NA TTS (NR_126427) TTS (NR_126427) 8513 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-3 chr11 116821544 116821824 + 0.30803596071496 NA intron (NM_001347633, intron 1 of 4) intron (NM_001347633, intron 1 of 4) 6362 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-2 chr1 71943951 71944287 + 0.30803596071496 NA Intergenic Intergenic 56007 NR_027658 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-6 chr19 42612575 42612795 + 0.30803596071496 NA intron (NM_001164311, intron 1 of 14) intron (NM_001164311, intron 1 of 14) 121 NM_001164311 67573 Mm.178767 NM_053083 ENSMUSG00000025185 Loxl4 4833426I20Rik|Loxc lysyl oxidase-like 4 protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-12 chr8 122164230 122164639 + 0.30803596071496 NA Intergenic Intergenic -117707 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-7 chr4 58402650 58402982 + 0.30803596071496 NA Intergenic Intergenic 38282 NR_037278 100526502 NR_037278 ENSMUSG00000093293 Mir3095 mir-3095|mmu-mir-3095 microRNA 3095 ncRNA common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-5 chr13 69584888 69585146 + 0.30803596071496 NA intron (NM_175283, intron 4 of 4) intron (NM_175283, intron 4 of 4) 26446 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-3 chr1 93444143 93444383 + 0.30803596071496 NA intron (NM_133808, intron 1 of 27) intron (NM_133808, intron 1 of 27) 1438 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-12 chr2 157065762 157066016 + 0.30803596071496 NA intron (NM_001164663, intron 1 of 14) intron (NM_001164663, intron 1 of 14) 13376 NM_001164663 320706 Mm.79466 NM_001164663 ENSMUSG00000055485 Soga1 9830001H06Rik|AI426038|D430036N24Rik|Soga suppressor of glucose, autophagy associated 1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-8 chr2 51985777 51986113 + 0.30803596071496 NA Intergenic Intergenic -12737 NM_001141948 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-14 chr4 134000674 134000880 + 0.30803596071496 NA promoter-TSS (NM_026144) promoter-TSS (NM_026144) 87 NM_026144 67422 Mm.100290 NM_026144 ENSMUSG00000012117 Dhdds 3222401G21Rik|CIT|DS|HDS|W91638 dehydrodolichyl diphosphate synthase protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-2 chr11 95041057 95041278 + 0.30803596071496 NA promoter-TSS (NM_001361915) promoter-TSS (NM_001361915) 204 NM_133667 18604 Mm.29768 NM_133667 ENSMUSG00000038967 Pdk2 - pyruvate dehydrogenase kinase, isoenzyme 2 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-24 chr8 120228873 120229097 + 0.30803596071496 NA promoter-TSS (NR_110496) promoter-TSS (NR_110496) -755 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-13 chr9 70249559 70249807 + 0.30803596071496 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 42333 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-15 chr4 155136100 155136299 + 0.30803596071496 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 49595 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-8 chr2 84633933 84634186 + 0.30803596071496 NA intron (NM_007615, intron 1 of 19) intron (NM_007615, intron 1 of 19) 15421 NM_001355065 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-19 chr6 108828810 108829012 + 0.30803596071496 NA exon (NM_138677, exon 1 of 12) exon (NM_138677, exon 1 of 12) 270 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-4 chr13 63324748 63324974 + 0.30803596071496 NA non-coding (NR_110521, exon 6 of 6) non-coding (NR_110521, exon 6 of 6) -23578 NR_037235 100526474 NR_037235 ENSMUSG00000092741 Mir3074-1 mmu-mir-3074-1 microRNA 3074-1 ncRNA common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-9 chr2 167062163 167062579 + 0.30803596071496 NA promoter-TSS (NR_138563) promoter-TSS (NR_138563) -563 NR_138563 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496 chr1 64825864 64826156 + 0.30803596071496 NA intron (NM_001039493, intron 6 of 7) intron (NM_001039493, intron 6 of 7) -88260 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-8 chr19 7295670 7295908 + 0.30803596071496 NA promoter-TSS (NM_001080390) promoter-TSS (NM_001080390) -342 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding unique_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496 chr1 43138193 43138457 + 0.30803596071496 NA intron (NM_010212, intron 3 of 5) intron (NM_010212, intron 3 of 5) 25636 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-3 chr10 110920594 110920847 + 0.30803596071496 NA intron (NM_007792, intron 1 of 5) intron (NM_007792, intron 1 of 5) 544 NM_007792 13008 Mm.2020 NM_007792 ENSMUSG00000020186 Csrp2 AW551867|Crp2|SmLim cysteine and glycine-rich protein 2 protein-coding common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-13 chr3 52554755 52555086 + 0.30803596071496 NA Intergenic Intergenic 37956 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-7 chr18 5133905 5134149 + 0.30803596071496 NA Intergenic Intergenic 31704 NR_153824 102637682 Mm.451914 NR_153824 Gm26682 Gm38715 predicted gene, 26682 ncRNA unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496 chr1 132308710 132308946 + 0.30803596071496 NA Intergenic Intergenic -7297 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding unique_peak1_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-5 chr16 57682602 57683035 + 0.30803596071496 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 71919 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_18_15_-0.0237815658816083_3.9881092170592_0.30803596071496-10 chr3 27718643 27718902 + 0.30803596071496 NA Intergenic Intergenic -8320 NM_173182 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_76_61_0.0266381417843142_5.96751538127903_0.308035049112922-4 chr4 149099161 149099829 + 0.308035049112922 NA intron (NM_019781, intron 1 of 8) intron (NM_019781, intron 1 of 8) 317 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_76_61_0.0266381417843142_5.96751538127903_0.308035049112922-3 chr4 12089362 12090184 + 0.308035049112922 NA intron (NM_198957, intron 2 of 3) CpG-9730 403 NM_198957 77604 Mm.474129 NM_198957 ENSMUSG00000052137 Rbm12b2 AV299215|C430048L16Rik|Rbm12bb RNA binding motif protein 12 B2 protein-coding common_peak1_76_61_0.0266381417843142_5.96751538127903_0.308035049112922 chr8 25069151 25069575 + 0.308035049112922 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -30401 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak2_76_61_0.0266381417843142_5.96751538127903_0.308035049112922 chr12 80370656 80371982 + 0.308035049112922 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 20358 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_76_61_0.0266381417843142_5.96751538127903_0.308035049112922-2 chr8 84256687 84257565 + 0.308035049112922 NA TTS (NM_001294281) TTS (NM_001294281) 198 NM_026423 67873 Mm.278085 NM_026423 ENSMUSG00000004996 Mri1 2410018C20Rik methylthioribose-1-phosphate isomerase 1 protein-coding common_peak2_76_61_0.0266381417843142_5.96751538127903_0.308035049112922-2 chr17 65950655 65951175 + 0.308035049112922 NA intron (NM_023053, intron 1 of 4) CpG 272 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak1_73_63_-0.0760942385158021_5.9619528807421_0.308035049112909 chr6 83244640 83245277 + 0.308035049112909 NA intron (NM_001166067, intron 2 of 24) intron (NM_001166067, intron 2 of 24) 7583 NM_001166067 232156 Mm.333189 NM_001166067 ENSMUSG00000068323 Slc4a5 C330006M16|C330016K18Rik solute carrier family 4, sodium bicarbonate cotransporter, member 5 protein-coding common_peak2_73_63_-0.0760942385158021_5.9619528807421_0.308035049112909-2 chr11 107012107 107012729 + 0.308035049112909 NA Intergenic Intergenic -12893 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak2_73_63_-0.0760942385158021_5.9619528807421_0.308035049112909 chr10 128083362 128084358 + 0.308035049112909 NA intron (NM_016774, intron 1 of 9) CpG 553 NM_016774 11947 Mm.238973 NM_016774 ENSMUSG00000025393 Atp5b Atp5f1b ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit protein-coding common_peak2_73_63_-0.0760942385158021_5.9619528807421_0.308035049112909-3 chr3 130708842 130709530 + 0.308035049112909 NA intron (NM_025509, intron 1 of 3) CpG 258 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak1_168_141_-0.0428207739587396_7.12833673252531_0.308034880360299 chr8 70460860 70461808 + 0.308034880360299 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 15609 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_173_139_0.0194106270865113_7.13898833048822_0.307985021628514 chr2 181519803 181521434 + 0.307985021628514 NA non-coding (NR_073369, exon 1 of 6) non-coding (NR_073369, exon 1 of 6) 133 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak1_170_142_-0.0360916573515757_7.1418255081026_0.307985021628514 chr15 82046006 82047603 + 0.307985021628514 NA intron (NM_011482, intron 1 of 2) intron (NM_011482, intron 1 of 2) 794 NM_011482 20826 Mm.299312 NM_011482 ENSMUSG00000063480 Snu13 FA-1|Fta1|Nhp2l1|Ssfa1 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) protein-coding common_peak1_171_143_-0.0377924303793682_7.15102878625263_0.307935867653631 chr17 44733928 44735560 + 0.307935867653631 NA intron (NR_073392, intron 2 of 7) CpG 1432 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_74_64_-0.0792333486486916_5.98275113870411_0.307923848373187 chr17 83954171 83955035 + 0.307923848373187 NA Intergenic Intergenic -43949 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_75_64_-0.0602593380565519_5.99223814400018_0.307923848373187 chr10 43694261 43695067 + 0.307923848373187 NA Intergenic Intergenic -51494 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak2_74_64_-0.0792333486486916_5.98275113870411_0.307923848373187-2 chr4 127351810 127352865 + 0.307923848373187 NA 5' UTR (NM_008127, exon 2 of 2) 5' UTR (NM_008127, exon 2 of 2) 1744 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak2_75_64_-0.0602593380565519_5.99223814400018_0.307923848373187-2 chr10 96619523 96620316 + 0.307923848373187 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 2918 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_75_64_-0.0602593380565519_5.99223814400018_0.307923848373187 chr15 79324216 79325052 + 0.307923848373187 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 3737 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_77_62_0.0220388736094073_5.98829936030462_0.307923848373175-3 chr19 5874638 5875696 + 0.307923848373175 NA promoter-TSS (NM_026169) promoter-TSS (NM_026169) 41 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak1_77_62_0.0220388736094073_5.98829936030462_0.307923848373175-5 chr8 105516247 105517093 + 0.307923848373175 NA Intergenic Intergenic -2076 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak2_77_62_0.0220388736094073_5.98829936030462_0.307923848373175 chr11 98148471 98149490 + 0.307923848373175 NA intron (NM_028149, intron 1 of 14) intron (NM_028149, intron 1 of 14) 636 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding common_peak1_77_62_0.0220388736094073_5.98829936030462_0.307923848373175 chr10 34483658 34484806 + 0.307923848373175 NA exon (NM_010237, exon 2 of 9) exon (NM_010237, exon 2 of 9) 832 NM_010237 14302 Mm.332432 NM_010237 ENSMUSG00000019779 Frk BSK|BSK/IYK|C85044|GTK|RAK fyn-related kinase protein-coding common_peak1_77_62_0.0220388736094073_5.98829936030462_0.307923848373175-6 chr8 123883864 123884739 + 0.307923848373175 NA Intergenic Intergenic 10474 NM_001272041 11459 Mm.214950 NM_009606 ENSMUSG00000031972 Acta1 AA959943|Acta-2|Acts|Actsk-1 actin, alpha 1, skeletal muscle protein-coding common_peak1_77_62_0.0220388736094073_5.98829936030462_0.307923848373175-2 chr12 80228257 80229124 + 0.307923848373175 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 31681 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_77_62_0.0220388736094073_5.98829936030462_0.307923848373175-4 chr7 105743717 105744406 + 0.307923848373175 NA TTS (NM_009906) TTS (NM_009906) 277 NM_020024 24075 Mm.274846 NM_020024 ENSMUSG00000043866 Taf10 30kDa|AU041226|TAFII30|Taf2h TATA-box binding protein associated factor 10 protein-coding common_peak2_175_141_0.0153183239458903_7.15740628147763_0.307887403597709 chr7 127875096 127876729 + 0.307887403597709 NA promoter-TSS (NM_001362191) promoter-TSS (NM_001362191) -270 NM_001362191 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding common_peak2_310_257_-0.0306171914158675_7.99591865971532_0.307842527971544 chr4 117124050 117126186 + 0.307842527971544 NA intron (NR_024078, intron 1 of 6) intron (NR_024078, intron 1 of 6) 607 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak2_78_63_0.0175676662752764_6.00878383313764_0.3078161230877-2 chr5 142906924 142907323 + 0.3078161230877 NA promoter-TSS (NM_007393) promoter-TSS (NM_007393) -369 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_78_63_0.0175676662752764_6.00878383313764_0.3078161230877 chr9 21803581 21804342 + 0.3078161230877 NA intron (NM_177030, intron 43 of 49) intron (NM_177030, intron 43 of 49) -5415 NM_145611 235041 Mm.257371 NM_145611 ENSMUSG00000032194 Kank2 AI504612|Ankrd25|BC010245 KN motif and ankyrin repeat domains 2 protein-coding common_peak2_76_65_-0.0635596671872642_6.01261428576482_0.3078161230877 chr2 122147752 122148236 + 0.3078161230877 NA intron (NM_009735, intron 1 of 3) intron (NM_009735, intron 1 of 3) 307 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak2_78_63_0.0175676662752764_6.00878383313764_0.3078161230877 chr5 114127059 114128275 + 0.3078161230877 NA exon (NM_001359940, exon 2 of 4) exon (NM_001359940, exon 2 of 4) 551 NM_001359940 231642 Mm.332593 NM_175016 ENSMUSG00000044339 Alkbh2 9530023G02|AU016977|Abh2|mABH2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak2_312_258_-0.0270153918700835_8.00330059175151_0.307815915974656 chr8 54527662 54529892 + 0.307815915974656 NA intron (NM_029701, intron 1 of 4) intron (NM_029701, intron 1 of 4) 1221 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak1_174_146_-0.0427694126831701_7.17828763849478_0.307792487943787 chr16 57549046 57551292 + 0.307792487943787 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 927 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_80_64_0.0310146400991593_6.03787513307803_0.307711712824847 chr8 105595196 105595846 + 0.307711712824847 NA Intergenic Intergenic -9708 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Ripor1 2310066E14Rik|AI837433|Fam65a RHO family interacting cell polarization regulator 1 protein-coding common_peak1_79_64_0.0132191707967317_6.02897739842682_0.307711712824847 chr2 172370685 172371528 + 0.307711712824847 NA promoter-TSS (NM_001291185) promoter-TSS (NM_001291185) 103 NM_024199 67337 Mm.26944 NM_024199 ENSMUSG00000027498 Cstf1 1700057K18Rik|AI788832 cleavage stimulation factor, 3' pre-RNA, subunit 1 protein-coding common_peak2_77_66_-0.066770393348448_6.03270399378355_0.307711712824847 chr5 130170748 130171510 + 0.307711712824847 NA promoter-TSS (NM_001199059) promoter-TSS (NM_001199059) -690 NM_001199059 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_80_64_0.0310146400991593_6.03787513307803_0.307711712824847-2 chr9 36768035 36768732 + 0.307711712824847 NA promoter-TSS (NM_008408) promoter-TSS (NM_008408) -805 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak2_79_64_0.0132191707967317_6.02897739842682_0.307711712824847 chr18 35598682 35599027 + 0.307711712824847 NA intron (NM_001357471, intron 1 of 3) CpG 237 NM_001357472 67869 Mm.126534 NM_026420 ENSMUSG00000037058 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 protein-coding common_peak1_318_263_-0.0274007191751675_8.03069375977087_0.307685914931789 chr8 111728808 111732007 + 0.307685914931789 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 1729 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-7 chr2 102551648 102551858 + 0.307611222530528 NA intron (NM_173749, intron 1 of 10) intron (NM_173749, intron 1 of 10) 1732 NM_173749 210622 Mm.28649 NM_173749 ENSMUSG00000027188 Pamr1 5930437L24|E430002G05Rik|Ramp peptidase domain containing associated with muscle regeneration 1 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-6 chr15 59597160 59597408 + 0.307611222530528 NA intron (NM_026746, intron 6 of 6) intron (NM_026746, intron 6 of 6) -51370 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-4 chr11 43529371 43529644 + 0.307611222530528 NA intron (NM_001045530, intron 2 of 5) intron (NM_001045530, intron 2 of 5) 758 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-5 chr3 96057412 96057647 + 0.307611222530528 NA intron (NM_013841, intron 1 of 14) intron (NM_013841, intron 1 of 14) 926 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-3 chr1 153900475 153900866 + 0.307611222530528 NA TTS (NR_106194) TTS (NR_106194) 741 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-2 chr12 85288651 85289040 + 0.307611222530528 NA intron (NM_172414, intron 1 of 2) intron (NM_172414, intron 1 of 2) 254 NM_172414 72350 Mm.158810 NM_172414 ENSMUSG00000045064 Zc2hc1c 2810002I04Rik|AV046379|Fam164c zinc finger, C2HC-type containing 1C protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-6 chr4 43365419 43365660 + 0.307611222530528 NA exon (NM_177195, exon 21 of 29) exon (NM_177195, exon 21 of 29) -16443 NM_001037709 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-4 chr19 5786708 5787007 + 0.307611222530528 NA Intergenic Intergenic 9124 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-8 chr2 115781267 115781531 + 0.307611222530528 NA Intergenic Intergenic 142674 NR_035476 100316703 NR_035476 ENSMUSG00000088606 Mir1951 mir-1951|mmu-mir-1951 microRNA 1951 ncRNA common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-14 chr8 54077490 54077810 + 0.307611222530528 NA 5' UTR (NM_009506, exon 1 of 7) 5' UTR (NM_009506, exon 1 of 7) 118 NM_009506 22341 Mm.1402 NM_009506 ENSMUSG00000031520 Vegfc AW228853|VEGF-C vascular endothelial growth factor C protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528 chr1 170853045 170853414 + 0.307611222530528 NA intron (NM_001081304, intron 2 of 15) intron (NM_001081304, intron 2 of 15) 14542 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-5 chr14 76779943 76780385 + 0.307611222530528 NA Intergenic Intergenic 20033 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-11 chr3 122082153 122082375 + 0.307611222530528 NA intron (NM_007378, intron 7 of 49) intron (NM_007378, intron 7 of 49) 37804 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-9 chr4 116556314 116556587 + 0.307611222530528 NA promoter-TSS (NM_177670) promoter-TSS (NM_177670) -507 NM_177670 230657 Mm.291484 NM_177670 ENSMUSG00000055900 Tmem69 A630048M13Rik transmembrane protein 69 protein-coding unique_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-3 chr19 55706592 55706897 + 0.307611222530528 NA Intergenic MIR|SINE|MIR -4540 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-2 chr11 5788052 5788245 + 0.307611222530528 NA promoter-TSS (NM_001146308) promoter-TSS (NM_001146308) -335 NM_001146309 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528 chr11 106273270 106273595 + 0.307611222530528 NA promoter-TSS (NM_001130187) promoter-TSS (NM_001130187) -460 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-7 chr17 35870965 35871216 + 0.307611222530528 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 4475 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-3 chr16 18415929 18416144 + 0.307611222530528 NA intron (NM_007744, intron 1 of 4) intron (NM_007744, intron 1 of 4) -2542 NM_001111063 12846 Mm.100940 NM_007744 ENSMUSG00000000326 Comt Comt1|D16Wsu103e|D330014B15Rik catechol-O-methyltransferase protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-3 chr11 23008504 23008760 + 0.307611222530528 NA Intergenic CpG -4755 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-9 chr2 152890145 152890598 + 0.307611222530528 NA intron (NM_001141975, intron 14 of 17) intron (NM_001141975, intron 14 of 17) -20981 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528 chr1 72832477 72832710 + 0.307611222530528 NA intron (NM_001310659, intron 1 of 3) intron (NM_001310659, intron 1 of 3) 7206 NM_001310659 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-10 chr3 104794163 104794393 + 0.307611222530528 NA TTS (NM_008619) TTS (NM_008619) 5244 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-8 chr2 164455727 164456023 + 0.307611222530528 NA Intergenic Intergenic -5096 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-5 chr11 82019030 82019325 + 0.307611222530528 NA Intergenic Intergenic -16400 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-10 chr7 28587540 28587814 + 0.307611222530528 NA intron (NM_027470, intron 1 of 9) intron (NM_027470, intron 1 of 9) 10507 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 (RAC1) activated kinase 4 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-2 chr1 75520926 75521241 + 0.307611222530528 NA promoter-TSS (NM_027886) promoter-TSS (NM_027886) -446 NM_027886 71728 Mm.312650 NM_027886 ENSMUSG00000026213 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein protein-coding unique_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-7 chr8 11377044 11377394 + 0.307611222530528 NA intron (NM_009932, intron 4 of 47) ID_B1|SINE|B4 -64393 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-4 chr12 105033041 105033248 + 0.307611222530528 NA promoter-TSS (NR_003145) promoter-TSS (NR_003145) 526 NM_028419 73046 Mm.29128 NM_028419 ENSMUSG00000021102 Glrx5 - glutaredoxin 5 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-15 chr8 117342433 117342784 + 0.307611222530528 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -6562 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-2 chr14 50784856 50785290 + 0.307611222530528 NA intron (NM_001360545, intron 1 of 8) intron (NM_001360545, intron 1 of 8) 447 NM_177625 219022 Mm.276362 NM_177625 ENSMUSG00000006288 Ttc5 - tetratricopeptide repeat domain 5 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-12 chr4 59447717 59447995 + 0.307611222530528 NA Intergenic RSINE1|SINE|B4 -9223 NM_001163288 634731 Mm.483589 NM_001163288 ENSMUSG00000038578 Susd1 A530080P10|Gm12528 sushi domain containing 1 protein-coding common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-11 chr9 96364629 96364877 + 0.307611222530528 NA promoter-TSS (NM_007502) promoter-TSS (NM_007502) -322 NM_001357212 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528 chr13 75789306 75789590 + 0.307611222530528 NA Intergenic Intergenic -50437 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-16 chr9 96801497 96801699 + 0.307611222530528 NA Intergenic Intergenic 36036 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak1_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-6 chr2 101985381 101985615 + 0.307611222530528 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 99236 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding unique_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-4 chr8 92984021 92984554 + 0.307611222530528 NA intron (NM_009209, intron 4 of 13) intron (NM_009209, intron 4 of 13) 23240 NM_009209 20538 Mm.57040 NM_009209 ENSMUSG00000055368 Slc6a2 NE-T|NET|Slc6a5 solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 protein-coding common_peak2_18_17_-0.19370656732392_4.07307171778035_0.307611222530528-13 chr4 132345231 132345574 + 0.307611222530528 NA intron (NM_133878, intron 1 of 9) CpG 348 NM_001197082 100088 Mm.255045 NM_133878 ENSMUSG00000028896 Rcc1 4931417M11Rik|AI326872|Chc1 regulator of chromosome condensation 1 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-13 chr19 44907548 44908033 + 0.307611222530525 NA Intergenic MamRep605|LTR?|LTR? -23329 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-3 chr13 104285925 104286132 + 0.307611222530525 NA Intergenic Intergenic -1807 NR_136938 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-19 chr9 43874085 43874305 + 0.307611222530525 NA Intergenic Intergenic 129619 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-4 chr3 107863623 107863893 + 0.307611222530525 NA Intergenic Intergenic -13472 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-20 chrX 7429188 7429501 + 0.307611222530525 NA Intergenic Intergenic -6356 NR_027924 68355 Mm.45111 NR_027924 2010204K13Rik 0610010M13Rik|Cip7 RIKEN cDNA 2010204K13 gene ncRNA unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-10 chr8 126928742 126929084 + 0.307611222530525 NA Intergenic Intergenic 17008 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-3 chr19 55713061 55713337 + 0.307611222530525 NA Intergenic B1F|SINE|Alu -10995 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-7 chr19 55732580 55733008 + 0.307611222530525 NA Intergenic Intergenic -9016 NM_001331147 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-5 chr6 128200238 128200587 + 0.307611222530525 NA Intergenic CpG -16609 NR_077223 330427 Mm.426356 NR_077223 ENSMUSG00000107879 9330102E08Rik - RIKEN cDNA 9330102E08 gene ncRNA unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-2 chr11 20477222 20477536 + 0.307611222530525 NA Intergenic Intergenic -65874 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-16 chr5 121220337 121220660 + 0.307611222530525 NA exon (NM_181421, exon 1 of 76) exon (NM_181421, exon 1 of 76) 279 NM_181421 269700 Mm.184589 NM_181421 ENSMUSG00000042744 Hectd4 A130010L24|AU042671|BC019639|EG545802|Gm15800|mKIAA0614 HECT domain E3 ubiquitin protein ligase 4 protein-coding unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-8 chr8 105532270 105532726 + 0.307611222530525 NA intron (NM_013477, intron 2 of 7) intron (NM_013477, intron 2 of 7) 13752 NM_008289 15484 Mm.5079 NM_008289 ENSMUSG00000031891 Hsd11b2 11HSD2 hydroxysteroid 11-beta dehydrogenase 2 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-8 chr14 45494100 45494324 + 0.307611222530525 NA intron (NM_146054, intron 3 of 14) intron (NM_146054, intron 3 of 14) 35853 NM_001360526 218952 Mm.210018 NM_146054 ENSMUSG00000037712 Fermt2 AA960555|Kindlin-2|Mig2|Plekhc1 fermitin family member 2 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-6 chr5 31290637 31290841 + 0.307611222530525 NA intron (NM_026298, intron 1 of 47) intron (NM_026298, intron 1 of 47) 375 NM_026298 67661 Mm.293023 NM_026298 ENSMUSG00000038564 Ift172 4930553F24Rik|Slb|avc1|wim intraflagellar transport 172 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-19 chr9 69469002 69469462 + 0.307611222530525 NA intron (NM_007585, intron 3 of 12) intron (NM_007585, intron 3 of 12) 12288 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-4 chr2 13558225 13558551 + 0.307611222530525 NA Intergenic Intergenic -13724 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-5 chr12 12684871 12685106 + 0.307611222530525 NA Intergenic Intergenic -15071 NR_136889 102637952 Mm.421393 NR_136889 Gm34637 - predicted gene, 34637 ncRNA common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-12 chr9 56869904 56870253 + 0.307611222530525 NA intron (NM_139001, intron 1 of 9) intron (NM_139001, intron 1 of 9) 4974 NM_139001 121021 Mm.41329 NM_139001 ENSMUSG00000032911 Cspg4 4732461B14Rik|AN2|NG2 chondroitin sulfate proteoglycan 4 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-20 chrX 163909286 163909635 + 0.307611222530525 NA intron (NM_001290378, intron 1 of 4) CpG 443 NM_001290379 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525 chr11 8453647 8453982 + 0.307611222530525 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 210721 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-12 chr2 84518200 84518482 + 0.307611222530525 NA Intergenic Intergenic -11468 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-14 chr19 53406168 53406416 + 0.307611222530525 NA Intergenic ID_B1|SINE|B4 -15658 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-6 chr4 124802701 124802989 + 0.307611222530525 NA intron (NM_008636, intron 1 of 10) intron (NM_008636, intron 1 of 10) 296 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding unique_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-6 chr7 3168173 3168379 + 0.307611222530525 NA intron (NM_001004153, intron 1 of 11) intron (NM_001004153, intron 1 of 11) 927 NM_001004153 245128 Mm.268551 NM_001004153 ENSMUSG00000054753 AU018091 - expressed sequence AU018091 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-2 chr10 19594359 19594653 + 0.307611222530525 NA intron (NM_010511, intron 1 of 6) intron (NM_010511, intron 1 of 6) 2557 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-6 chr11 96969936 96970231 + 0.307611222530525 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 7605 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-4 chr15 59726100 59726478 + 0.307611222530525 NA Intergenic Intergenic 68670 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-5 chr18 53744982 53745383 + 0.307611222530525 NA promoter-TSS (NM_178686) promoter-TSS (NM_178686) -635 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-7 chr13 37847372 37847726 + 0.307611222530525 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 20156 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-9 chr8 25076748 25077156 + 0.307611222530525 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 24859 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-18 chr8 36116684 36116965 + 0.307611222530525 NA intron (NM_172911, intron 3 of 5) intron (NM_172911, intron 3 of 5) 21996 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-14 chr3 61340805 61341056 + 0.307611222530525 NA Intergenic Intergenic -23577 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-2 chr14 66973992 66974370 + 0.307611222530525 NA Intergenic Intergenic 34696 NM_009761 12177 Mm.29820 NM_009761 ENSMUSG00000022051 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like protein-coding unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-3 chr12 111814301 111814591 + 0.307611222530525 NA promoter-TSS (NM_028875) promoter-TSS (NM_028875) 276 NM_026752 68520 Mm.390497 NM_026752 ENSMUSG00000021286 Zfyve21 1110013H04Rik|AW558780|C85416 zinc finger, FYVE domain containing 21 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-2 chr16 58670280 58670565 + 0.307611222530525 NA 5' UTR (NM_007757, exon 1 of 7) 5' UTR (NM_007757, exon 1 of 7) 214 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-11 chr17 25756126 25756446 + 0.307611222530525 NA Intergenic Intergenic -1908 NM_001356286 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-11 chr2 4402069 4402316 + 0.307611222530525 NA intron (NM_001177843, intron 1 of 23) intron (NM_001177843, intron 1 of 23) 1216 NM_001177843 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-21 chrX 163909260 163909636 + 0.307611222530525 NA intron (NM_001290378, intron 1 of 4) CpG 431 NM_001290379 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-2 chr11 95087697 95087963 + 0.307611222530525 NA Intergenic Intergenic -11019 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525 chr10 83301415 83301803 + 0.307611222530525 NA intron (NM_177388, intron 4 of 10) B1F2|SINE|Alu 36208 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-5 chr2 44927439 44927782 + 0.307611222530525 NA Intergenic CpG -65988 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-8 chr3 68467871 68468137 + 0.307611222530525 NA promoter-TSS (NM_001282045) promoter-TSS (NM_001282045) -179 NM_001282045 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-18 chr8 36705041 36705420 + 0.307611222530525 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) 27824 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-5 chr3 121684249 121684525 + 0.307611222530525 NA Intergenic Intergenic 13624 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-12 chr17 46874670 46875010 + 0.307611222530525 NA Intergenic Intergenic -15781 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-4 chr11 98193465 98193920 + 0.307611222530525 NA promoter-TSS (NM_134027) promoter-TSS (NM_134027) -399 NM_001080118 19014 Mm.12926 NM_013634 ENSMUSG00000018160 Med1 AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|TRIP-2|l11Jus15 mediator complex subunit 1 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-9 chr16 62846520 62846768 + 0.307611222530525 NA intron (NM_026577, intron 1 of 9) CpG 396 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-17 chr7 128309083 128309399 + 0.307611222530525 NA Intergenic Intergenic -11110 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525 chr1 87755489 87755764 + 0.307611222530525 NA promoter-TSS (NM_001205391) promoter-TSS (NM_001205391) -385 NM_029846 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-9 chrX 102188971 102189328 + 0.307611222530525 NA intron (NM_009094, intron 1 of 6) intron (NM_009094, intron 1 of 6) 242 NM_009094 20102 Mm.66 NM_009094 ENSMUSG00000031320 Rps4x Rps4|Rps4-1 ribosomal protein S4, X-linked protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-13 chr3 27664474 27664953 + 0.307611222530525 NA intron (NM_173182, intron 1 of 25) intron (NM_173182, intron 1 of 25) 45739 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-7 chr5 137100844 137101147 + 0.307611222530525 NA Intergenic Intergenic 15212 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525 chr12 112861712 112861942 + 0.307611222530525 NA promoter-TSS (NM_019925) promoter-TSS (NM_019925) -911 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-10 chr16 74093082 74093502 + 0.307611222530525 NA intron (NM_001358493, intron 2 of 28) intron (NM_001358493, intron 2 of 28) 248775 NR_030464 751561 NR_030464 ENSMUSG00000104758 Mir691 Mirn691|mir-691|mmu-mir-691 microRNA 691 ncRNA common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-4 chr11 44945857 44946217 + 0.307611222530525 NA intron (NM_001290709, intron 10 of 15) intron (NM_001290709, intron 10 of 15) 170891 NR_045100 100504255 Mm.123608 NR_045100 ENSMUSG00000084773 Gm12159 - predicted gene 12159 ncRNA common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-11 chr8 86769940 86770203 + 0.307611222530525 NA Intergenic Intergenic -24065 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a siah E3 ubiquitin protein ligase 1A protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-6 chr4 152261278 152261614 + 0.307611222530525 NA intron (NM_133348, intron 8 of 8) intron (NM_133348, intron 8 of 8) -12916 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-7 chr5 93264437 93264624 + 0.307611222530525 NA Intergenic Intergenic -3043 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-7 chr4 154160371 154160638 + 0.307611222530525 NA exon (NM_026388, exon 1 of 4) exon (NM_026388, exon 1 of 4) 180 NR_151647 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-9 chr15 79528764 79529006 + 0.307611222530525 NA 3' UTR (NM_152806, exon 2 of 2) 3' UTR (NM_152806, exon 2 of 2) 4032 NM_152806 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-7 chr13 98535122 98535430 + 0.307611222530525 NA Intergenic Intergenic -100211 NR_045498 70090 Mm.410857 NR_045498 ENSMUSG00000099446 2310005E17Rik - RIKEN cDNA 2310005E17 gene ncRNA common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525 chr1 135534898 135535259 + 0.307611222530525 NA intron (NM_173437, intron 2 of 28) intron (NM_173437, intron 2 of 28) 50277 NM_173437 215690 Mm.34977 NM_173437 ENSMUSG00000009418 Nav1 9530089B19|9930003A20Rik|C230080M11Rik|Gm38399|Pomfil3|Unc53h1|mKIAA1151|steerin-1 neuron navigator 1 protein-coding unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-6 chr19 28299681 28299890 + 0.307611222530525 NA intron (NM_175459, intron 7 of 10) intron (NM_175459, intron 7 of 10) -288619 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-16 chr3 57502944 57503263 + 0.307611222530525 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 72773 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-2 chr13 71962726 71962968 + 0.307611222530525 NA intron (NM_010573, intron 1 of 3) CpG 876 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-3 chr18 65725540 65725797 + 0.307611222530525 NA intron (NM_177028, intron 6 of 14) intron (NM_177028, intron 6 of 14) 27400 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-4 chr13 54589601 54589957 + 0.307611222530525 NA promoter-TSS (NM_025933) promoter-TSS (NM_025933) 295 NM_178605 28126 Mm.439993 NM_178605 ENSMUSG00000025869 Nop16 AA409471|D13Wsu177e NOP16 nucleolar protein protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-6 chr12 52783178 52783610 + 0.307611222530525 NA intron (NM_198111, intron 1 of 13) intron (NM_198111, intron 1 of 13) 84011 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525 chr1 34439496 34439683 + 0.307611222530525 NA promoter-TSS (NM_027159) promoter-TSS (NM_027159) 83 NM_027159 69668 Mm.379170 NM_027159 ENSMUSG00000042111 Ccdc115 2310061I09Rik|Ccp1 coiled-coil domain containing 115 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-15 chr3 122409719 122410285 + 0.307611222530525 NA Intergenic Intergenic -9755 NM_013867 29815 Mm.45815 NM_013867 ENSMUSG00000028121 Bcar3 AI131758|AND-34 breast cancer anti-estrogen resistance 3 protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-8 chr7 112697375 112697569 + 0.307611222530525 NA intron (NM_001166584, intron 1 of 13) intron (NM_001166584, intron 1 of 13) 18152 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525 chr1 36065246 36065536 + 0.307611222530525 NA Intergenic Intergenic -3009 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-7 chr8 69939886 69940267 + 0.307611222530525 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) 34307 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525 chr14 28112759 28113065 + 0.307611222530525 NA intron (NM_001347497, intron 15 of 19) intron (NM_001347497, intron 15 of 19) -392561 NM_009524 22418 Mm.287544 NM_009524 ENSMUSG00000021994 Wnt5a 8030457G12Rik|Wnt-5a wingless-type MMTV integration site family, member 5A protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-13 chrX 7429199 7429499 + 0.307611222530525 NA Intergenic Intergenic -6361 NR_027924 68355 Mm.45111 NR_027924 2010204K13Rik 0610010M13Rik|Cip7 RIKEN cDNA 2010204K13 gene ncRNA common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-15 chr2 153347024 153347220 + 0.307611222530525 NA intron (NM_001039939, intron 1 of 11) intron (NM_001039939, intron 1 of 11) 983 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-3 chr1 186610319 186610646 + 0.307611222530525 NA Intergenic Intergenic -51801 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-6 chr6 145913372 145913725 + 0.307611222530525 NA Intergenic Intergenic -18325 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-3 chr10 76961610 76961867 + 0.307611222530525 NA intron (NM_001347216, intron 1 of 15) CpG 209 NM_001347216 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-10 chr8 83442124 83442410 + 0.307611222530525 NA intron (NM_001039137, intron 1 of 3) CpG 395 NM_001285992 56367 Mm.246911 NM_019708 ENSMUSG00000063253 Scoc 0610011C06Rik|2810002J11Rik|AA415030|SCOCO short coiled-coil protein protein-coding unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-9 chr8 60773024 60773388 + 0.307611222530525 NA Intergenic Intergenic -117187 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding unique_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-4 chr15 97822829 97823153 + 0.307611222530525 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -8128 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-3 chr13 25069627 25069917 + 0.307611222530525 NA intron (NM_001195617, intron 2 of 7) intron (NM_001195617, intron 2 of 7) 13768 NM_177577 195208 Mm.284719 NM_177577 ENSMUSG00000035910 Dcdc2a AW492955|Dcdc2|RU2 doublecortin domain containing 2a protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-5 chr11 70199451 70199706 + 0.307611222530525 NA Intergenic Intergenic -14332 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-8 chr15 57616715 57616911 + 0.307611222530525 NA Intergenic Intergenic -77854 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-17 chr7 113206820 113207051 + 0.307611222530525 NA promoter-TSS (NM_007489) promoter-TSS (NM_007489) -530 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-5 chr4 141306409 141306918 + 0.307611222530525 NA intron (NM_010139, intron 2 of 16) intron (NM_010139, intron 2 of 16) 5442 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-4 chr15 13209741 13210054 + 0.307611222530525 NA Intergenic MLT1A1|LTR|ERVL-MaLR -36222 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-8 chr6 48602172 48602483 + 0.307611222530525 NA Intergenic Intergenic 8444 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-8 chr5 98429564 98429984 + 0.307611222530525 NA intron (NM_001024614, intron 2 of 5) intron (NM_001024614, intron 2 of 5) 45890 NR_030484 735265 NR_030484 ENSMUSG00000105814 Mir703 Mirn703|mir-703|mmu-mir-703 microRNA 703 ncRNA unique_peak2_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-3 chr15 84214163 84214455 + 0.307611222530525 NA TTS (NM_178614) TTS (NM_178614) -17734 NM_133167 170736 Mm.323892 NM_133167 ENSMUSG00000022438 Parvb AI595373|AW742462|D15Gsk1|affixin parvin, beta protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-2 chr1 162477404 162477693 + 0.307611222530525 NA intron (NM_001038619, intron 1 of 20) intron (NM_001038619, intron 1 of 20) 486 NM_172646 103967 Mm.441620 NM_172646 ENSMUSG00000040265 Dnm3 9630020E24Rik|AW061159|B230343F03Rik|C530045C17|Dyna III|mKIAA0820 dynamin 3 protein-coding common_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-10 chr17 25756141 25756502 + 0.307611222530525 NA Intergenic Intergenic -1943 NM_001356286 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding unique_peak1_20_16_0.0321268343422849_4.10352625842148_0.307611222530525-2 chr1 151066782 151067124 + 0.307611222530525 NA Intergenic B2_Mm2|SINE|B2 -71081 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak2_19_16_-0.0377658982786651_4.06857989211101_0.307611222530525-5 chr6 54972574 54972918 + 0.307611222530525 NA promoter-TSS (NM_172729) promoter-TSS (NM_172729) -134 NM_172729 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_81_65_0.0265654482419846_6.05767684347945_0.307610466878301 chr10 120627507 120628111 + 0.307610466878301 NA Intergenic Intergenic -137923 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_78_67_-0.0698951749750627_6.05251525376281_0.307610466878301 chr9 45984157 45984802 + 0.307610466878301 NA promoter-TSS (NM_001357239) promoter-TSS (NM_001357239) -93 NM_001357245 18475 Mm.200859 NM_008775 ENSMUSG00000003131 Pafah1b2 2610005M20Rik|AI747451|AU021353|Pafahb|mus[b] platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 protein-coding common_peak1_78_67_-0.0698951749750627_6.05251525376281_0.307610466878301 chr2 131392766 131393658 + 0.307610466878301 NA Intergenic Intergenic -40320 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak1_78_67_-0.0698951749750627_6.05251525376281_0.307610466878301-2 chr9 65561468 65562419 + 0.307610466878301 NA intron (NM_153119, intron 3 of 5) intron (NM_153119, intron 3 of 5) 18144 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_81_65_0.0265654482419846_6.05767684347945_0.307610466878301-3 chr2 173256083 173256988 + 0.307610466878301 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 19998 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_81_65_0.0265654482419846_6.05767684347945_0.307610466878301 chr1 46853708 46854305 + 0.307610466878301 NA promoter-TSS (NM_172653) promoter-TSS (NM_172653) -388 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak2_78_67_-0.0698951749750627_6.05251525376281_0.307610466878301-2 chrX 42149483 42150298 + 0.307610466878301 NA promoter-TSS (NM_021465) promoter-TSS (NM_021465) 215 NM_001358225 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak2_81_65_0.0265654482419846_6.05767684347945_0.307610466878301-2 chr15 3582878 3583654 + 0.307610466878301 NA promoter-TSS (NM_010284) promoter-TSS (NM_010284) 86 NM_001048178 14600 Mm.3986 NM_010284 ENSMUSG00000055737 Ghr GHBP|GHR/BP growth hormone receptor protein-coding common_peak1_81_65_0.0265654482419846_6.05767684347945_0.307610466878301-2 chr7 16311938 16313218 + 0.307610466878301 NA intron (NM_133234, intron 2 of 3) intron (NM_133234, intron 2 of 3) 2995 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_179_150_-0.0411465510449833_7.21783146380259_0.307610326988312 chr8 35590875 35592425 + 0.307610326988312 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -2630 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_183_147_0.0192899770208159_7.21909835413936_0.307610326988312 chr19 40830652 40832305 + 0.307610326988312 NA intron (NM_172839, intron 1 of 5) CpG 199 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak1_179_150_-0.0411465510449833_7.21783146380259_0.307610326988312-2 chr8 106137413 106139003 + 0.307610326988312 NA non-coding (NR_040344, exon 5 of 5) non-coding (NR_040344, exon 5 of 5) -1234 NM_176838 77411 Mm.183003 NM_176838 ENSMUSG00000084128 Esrp2 9530027K23Rik|Rbm35b epithelial splicing regulatory protein 2 protein-coding common_peak2_180_151_-0.0427329233854588_7.22656105175086_0.307566309912042 chr8 106137381 106139004 + 0.307566309912042 NA non-coding (NR_040344, exon 5 of 5) non-coding (NR_040344, exon 5 of 5) -1218 NM_176838 77411 Mm.183003 NM_176838 ENSMUSG00000084128 Esrp2 9530027K23Rik|Rbm35b epithelial splicing regulatory protein 2 protein-coding common_peak1_185_149_0.0154114717111113_7.23652442635144_0.307522877809737 chr8 25596509 25597572 + 0.307522877809737 NA intron (NM_173012, intron 1 of 10) CpG 447 NM_173012 270035 Mm.268349 NM_173012 ENSMUSG00000037363 Letm2 6030453H13|D030041N04Rik leucine zipper-EF-hand containing transmembrane protein 2 protein-coding common_peak2_186_149_0.023092545646592_7.24036496331918_0.307522877809737 chr4 89308974 89310906 + 0.307522877809737 NA intron (NM_007670, intron 1 of 1) intron (NM_007670, intron 1 of 1) 1092 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_182_152_-0.0364511507355658_7.23916226732487_0.307522877809737 chr9 119980564 119982209 + 0.307522877809737 NA intron (NM_153287, intron 1 of 4) intron (NM_153287, intron 1 of 4) 1637 NM_001357560 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_79_68_-0.072937472952983_6.07205572030168_0.307512243540658-2 chr1 139421891 139422836 + 0.307512243540658 NA promoter-TSS (NM_172643) promoter-TSS (NM_172643) -20 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding common_peak1_80_68_-0.0551420036505554_6.08095345495289_0.307512243540658-4 chr6 146642615 146643470 + 0.307512243540658 NA intron (NM_025315, intron 1 of 3) intron (NM_025315, intron 1 of 3) 463 NM_025315 108098 Mm.26212 NM_025315 ENSMUSG00000030291 Med21 0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7 mediator complex subunit 21 protein-coding common_peak1_82_66_0.0222344304331461_6.07720640567435_0.307512243540658-3 chr3 53462923 53463500 + 0.307512243540658 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) 47 NM_172501 212114 Mm.85744 NM_172501 ENSMUSG00000042997 Nhlrc3 4833441N19|8030451K01Rik|mKIAA4083 NHL repeat containing 3 protein-coding common_peak1_80_68_-0.0551420036505554_6.08095345495289_0.307512243540658-2 chr2 127722812 127723767 + 0.307512243540658 NA intron (NM_145532, intron 1 of 3) intron (NM_145532, intron 1 of 3) 6608 NM_145532 228576 Mm.133036 NM_145532 ENSMUSG00000027377 Mall BC012256|BENE mal, T cell differentiation protein-like protein-coding common_peak2_79_68_-0.072937472952983_6.07205572030168_0.307512243540658-4 chr9 22389203 22390029 + 0.307512243540658 NA promoter-TSS (NM_028390) promoter-TSS (NM_028390) -410 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak2_79_68_-0.072937472952983_6.07205572030168_0.307512243540658 chr1 132337275 132338214 + 0.307512243540658 NA Intergenic Intergenic 21619 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_79_68_-0.072937472952983_6.07205572030168_0.307512243540658-3 chr5 92927729 92928628 + 0.307512243540658 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 30185 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_82_66_0.0222344304331461_6.07720640567435_0.307512243540658-2 chr3 104817605 104818592 + 0.307512243540658 NA exon (NM_001163440, exon 2 of 21) exon (NM_001163440, exon 2 of 21) 207 NM_008619 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak2_79_68_-0.072937472952983_6.07205572030168_0.307512243540658-3 chr10 111473276 111473945 + 0.307512243540658 NA intron (NR_152558, intron 1 of 14) CpG 383 NR_152558 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding common_peak1_79_68_-0.072937472952983_6.07205572030168_0.307512243540658 chr13 51886291 51886826 + 0.307512243540658 NA Intergenic Intergenic 39883 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_79_68_-0.072937472952983_6.07205572030168_0.307512243540658-2 chr14 76527883 76528806 + 0.307512243540658 NA Intergenic Intergenic -7489 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak1_82_66_0.0222344304331461_6.07720640567435_0.307512243540658 chr11 117848204 117849023 + 0.307512243540658 NA promoter-TSS (NM_009689) promoter-TSS (NM_009689) -624 NM_001012273 11799 Mm.8552 NM_009689 ENSMUSG00000017716 Birc5 AAC-11|Api4|TIAP|survivin40 baculoviral IAP repeat-containing 5 protein-coding common_peak1_82_66_0.0222344304331461_6.07720640567435_0.307512243540658-2 chr15 102279530 102280284 + 0.307512243540658 NA intron (NM_134100, intron 1 of 1) intron (NM_134100, intron 1 of 1) 451 NM_134100 106073 Mm.287740 NM_134100 ENSMUSG00000045665 Mfsd5 AA409375|AW556797|D15Mgi27 major facilitator superfamily domain containing 5 protein-coding common_peak2_80_68_-0.0551420036505554_6.08095345495289_0.307512243540658 chr9 57432448 57433012 + 0.307512243540658 NA intron (NR_152145, intron 3 of 6) intron (NR_152145, intron 3 of 6) 7006 NM_001357913 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_80_68_-0.0551420036505554_6.08095345495289_0.307512243540658-3 chr3 79990253 79991588 + 0.307512243540658 NA Intergenic Intergenic 104990 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_82_66_0.0222344304331461_6.07720640567435_0.307512243540658 chr3 53462874 53463523 + 0.307512243540658 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) 60 NM_172501 212114 Mm.85744 NM_172501 ENSMUSG00000042997 Nhlrc3 4833441N19|8030451K01Rik|mKIAA4083 NHL repeat containing 3 protein-coding common_peak1_80_68_-0.0551420036505554_6.08095345495289_0.307512243540658 chr19 29047459 29048262 + 0.307512243540658 NA promoter-TSS (NM_021299) promoter-TSS (NM_021299) 42 NM_021299 56248 Mm.196067 NM_021299 ENSMUSG00000024782 Ak3 AA407498|AI506714|AK-3|Ak3l|Ak3l1|Akl3l adenylate kinase 3 protein-coding common_peak2_187_150_0.0211466048304878_7.24897804174032_0.30748001909663 chr8 105636523 105638005 + 0.30748001909663 NA promoter-TSS (NR_151743) promoter-TSS (NR_151743) 86 NR_151743 546100 Mm.471801 NR_151742 ENSMUSG00000098120 Gm5914 - predicted gene 5914 ncRNA common_peak1_187_150_0.0211466048304878_7.24897804174032_0.30748001909663 chr4 89308960 89310934 + 0.30748001909663 NA intron (NM_007670, intron 1 of 1) intron (NM_007670, intron 1 of 1) 1085 NM_007670 12579 Mm.423094 NM_007670 ENSMUSG00000073802 Cdkn2b AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding common_peak1_520_427_-0.0217396368694196_8.73059716796644_0.307424238779598 chr15 80011286 80014658 + 0.307424238779598 NA intron (NM_011057, intron 1 of 6) CpG 1836 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_81_69_-0.0583234493445284_6.1001212922727_0.307416909441837 chr1 130740585 130741853 + 0.307416909441837 NA intron (NM_177604, intron 3 of 3) intron (NM_177604, intron 3 of 3) 9243 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak1_83_67_0.018016875195797_6.09647127884824_0.307416909441837 chr19 5945308 5946295 + 0.307416909441837 NA intron (NM_001164057, intron 13 of 17) intron (NM_001164057, intron 13 of 17) 18405 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak2_81_69_-0.0583234493445284_6.1001212922727_0.307416909441837-2 chr13 42547535 42548645 + 0.307416909441837 NA Intergenic Intergenic -132709 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_81_69_-0.0583234493445284_6.1001212922727_0.307416909441837-2 chr12 55302853 55303667 + 0.307416909441837 NA promoter-TSS (NM_021529) promoter-TSS (NM_021529) -260 NM_021529 59032 Mm.427307 NM_021529 ENSMUSG00000021022 Ppp2r3c 4930511A21Rik|5730412A08Rik|G4-1|G5pr protein phosphatase 2, regulatory subunit B'', gamma protein-coding common_peak2_83_67_0.018016875195797_6.09647127884824_0.307416909441837 chr14 70333897 70334849 + 0.307416909441837 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 14060 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_81_69_-0.0583234493445284_6.1001212922727_0.307416909441837-3 chr17 33909462 33910081 + 0.307416909441837 NA promoter-TSS (NR_045146) promoter-TSS (NR_045146) 170 NM_001199733 13163 Mm.271809 NM_007829 ENSMUSG00000002307 Daxx - Fas death domain-associated protein protein-coding common_peak1_81_69_-0.0583234493445284_6.1001212922727_0.307416909441837-3 chr4 108832906 108833600 + 0.307416909441837 NA intron (NM_001356361, intron 1 of 5) intron (NM_001356361, intron 1 of 5) 387 NM_027453 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding common_peak2_83_67_0.018016875195797_6.09647127884824_0.307416909441837-2 chr16 87455120 87456010 + 0.307416909441837 NA intron (NM_024258, intron 1 of 17) CpG 580 NM_024258 74112 Mm.152941 NM_024258 ENSMUSG00000025616 Usp16 1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM ubiquitin specific peptidase 16 protein-coding common_peak2_83_67_0.018016875195797_6.09647127884824_0.307416909441837-3 chr6 125481421 125482064 + 0.307416909441837 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 13018 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_81_69_-0.0583234493445284_6.1001212922727_0.307416909441837 chr10 111575160 111576001 + 0.307416909441837 NA Intergenic Intergenic 18693 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_186_155_-0.0334909827197762_7.26865672750236_0.307395977010664 chr9 96780021 96782036 + 0.307395977010664 NA Intergenic Intergenic 15466 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_334_276_-0.0266422088014107_8.10042106164848_0.307370117393335 chr17 84184914 84187836 + 0.307370117393335 NA exon (NM_001001806, exon 2 of 2) exon (NM_001001806, exon 2 of 2) 1572 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_190_153_0.015443644252116_7.27450836282096_0.307354771948873 chr12 77238112 77239488 + 0.307354771948873 NA promoter-TSS (NR_045554) promoter-TSS (NR_045554) 61 NR_045554 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak1_190_153_0.015443644252116_7.27450836282096_0.307354771948873 chr11 103696922 103698513 + 0.307354771948873 NA promoter-TSS (NM_019650) promoter-TSS (NM_019650) -7 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak2_190_153_0.015443644252116_7.27450836282096_0.307354771948873-2 chr6 120363190 120364943 + 0.307354771948873 NA promoter-TSS (NM_145997) promoter-TSS (NM_145997) -33 NM_145997 214899 Mm.404761 NM_145997 ENSMUSG00000030180 Kdm5a AA409370|C76986|Jarid1a|RBP2|Rbbp2 lysine (K)-specific demethylase 5A protein-coding common_peak2_335_277_-0.0275713154238613_8.10515541501158_0.307347061998386 chr15 74955209 74957428 + 0.307347061998386 NA intron (NM_008529, intron 1 of 3) intron (NM_008529, intron 1 of 3) 1212 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_85_68_0.0306630938580197_6.12385600370718_0.307324338944823-2 chr12 21416574 21417522 + 0.307324338944823 NA exon (NM_011739, exon 1 of 5) exon (NM_011739, exon 1 of 5) 388 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak1_82_70_-0.0614234986137641_6.1190353701978_0.307324338944823 chr6 97204692 97205552 + 0.307324338944823 NA 5' UTR (NM_001301857, exon 2 of 18) 5' UTR (NM_001301857, exon 2 of 18) 525 NM_001301857 22200 Mm.277626 NM_011666 ENSMUSG00000030061 Uba3 A830034N06Rik|AI256736|AI848246|AW546539|Ube1c ubiquitin-like modifier activating enzyme 3 protein-coding common_peak2_82_70_-0.0614234986137641_6.1190353701978_0.307324338944823-2 chr9 62121520 62122572 + 0.307324338944823 NA TTS (NR_039595) TTS (NR_039595) 548 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak2_85_68_0.0306630938580197_6.12385600370718_0.307324338944823 chr10 63243982 63244741 + 0.307324338944823 NA intron (NM_001359484, intron 1 of 22) CpG 564 NM_001359484 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak2_82_70_-0.0614234986137641_6.1190353701978_0.307324338944823-3 chr9 78107468 78108628 + 0.307324338944823 NA intron (NM_001081490, intron 1 of 12) CpG 608 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding common_peak2_85_68_0.0306630938580197_6.12385600370718_0.307324338944823-3 chrX 96122230 96122960 + 0.307324338944823 NA intron (NM_010833, intron 1 of 12) B1F2|SINE|Alu 26550 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_84_68_0.0139083197389169_6.11547861664763_0.307324338944823-2 chr7 144964144 144965437 + 0.307324338944823 NA Intergenic Intergenic -24865 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding common_peak1_85_68_0.0306630938580197_6.12385600370718_0.307324338944823-4 chr8 120902104 120903235 + 0.307324338944823 NA Intergenic Intergenic 164030 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_84_68_0.0139083197389169_6.11547861664763_0.307324338944823 chr1 74008148 74009539 + 0.307324338944823 NA intron (NM_001289895, intron 4 of 32) intron (NM_001289895, intron 4 of 32) 115604 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_85_68_0.0306630938580197_6.12385600370718_0.307324338944823 chr11 75486812 75487402 + 0.307324338944823 NA exon (NM_138659, exon 1 of 42) exon (NM_138659, exon 1 of 42) 330 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding common_peak1_85_68_0.0306630938580197_6.12385600370718_0.307324338944823-3 chr4 58206055 58206884 + 0.307324338944823 NA 5' UTR (NM_022814, exon 1 of 48) 5' UTR (NM_022814, exon 1 of 48) 127 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding common_peak1_84_68_0.0139083197389169_6.11547861664763_0.307324338944823 chr4 3678193 3678990 + 0.307324338944823 NA intron (NM_001111096, intron 1 of 12) CpG 470 NM_010747 17096 Mm.317331 NM_010747 ENSMUSG00000042228 Lyn AA407514|Hck-2|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_85_68_0.0306630938580197_6.12385600370718_0.307324338944823-2 chr5 92931966 92932832 + 0.307324338944823 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 34406 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_82_70_-0.0614234986137641_6.1190353701978_0.307324338944823 chr8 11370953 11372127 + 0.307324338944823 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -58714 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_342_274_0.0176194253816746_8.11209752110286_0.307324173675389 chr15 77904329 77908261 + 0.307324173675389 NA Intergenic Intergenic 22699 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_345_277_0.0144409875701044_8.12616156650856_0.30725649317628 chr8 11311299 11314634 + 0.30725649317628 NA promoter-TSS (NR_133670) promoter-TSS (NR_133670) -140 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak1_340_281_-0.027021434039991_8.1260406353788_0.30725649317628 chr17 84184948 84187911 + 0.30725649317628 NA exon (NM_001001806, exon 2 of 2) exon (NM_001001806, exon 2 of 2) 1518 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-23 chr7 90041095 90041554 + 0.307235046933848 NA intron (NR_110364, intron 5 of 5) intron (NR_110364, intron 5 of 5) 12165 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15|Gm26529|Gm32094 RIKEN cDNA E230029C05 gene ncRNA common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-9 chr16 74093002 74093412 + 0.307235046933848 NA intron (NM_001358493, intron 2 of 28) intron (NM_001358493, intron 2 of 28) 248860 NR_030464 751561 NR_030464 ENSMUSG00000104758 Mir691 Mirn691|mir-691|mmu-mir-691 microRNA 691 ncRNA common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-6 chr11 117989659 117990008 + 0.307235046933848 NA intron (NR_151726, intron 1 of 9) intron (NR_151726, intron 1 of 9) 2976 NR_151726 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-16 chr7 19910640 19910979 + 0.307235046933848 NA intron (NM_027514, intron 4 of 7) intron (NM_027514, intron 4 of 7) 10334 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-13 chr7 16052508 16052790 + 0.307235046933848 NA Intergenic Intergenic -19196 NM_001347559 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-11 chr17 80765955 80766439 + 0.307235046933848 NA Intergenic Intergenic -38172 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-11 chr16 91729925 91730250 + 0.307235046933848 NA intron (NM_001110276, intron 1 of 15) CpG 716 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-24 chr8 31720248 31720587 + 0.307235046933848 NA Intergenic Intergenic 197786 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-5 chr2 174295033 174295311 + 0.307235046933848 NA non-coding (NR_002846, exon 1 of 5) non-coding (NR_002846, exon 1 of 5) 264 NR_002846 56802 Mm.125770 NR_002846 ENSMUSG00000086537 Nespas Gnas-as|Nespos neuroendocrine secretory protein antisense ncRNA common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-7 chr14 43277590 43277964 + 0.307235046933848 NA Intergenic Intergenic 70034 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-7 chr6 4487814 4488204 + 0.307235046933848 NA Intergenic Intergenic -17609 NM_007743 12843 Mm.277792 NM_007743 ENSMUSG00000029661 Col1a2 AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim collagen, type I, alpha 2 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-21 chrX 94121223 94121544 + 0.307235046933848 NA intron (NM_001358356, intron 1 of 8) intron (NM_001358356, intron 1 of 8) 2024 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding unique_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-4 chr5 32193132 32193488 + 0.307235046933848 NA Intergenic Intergenic -39398 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848 chr1 36708934 36709205 + 0.307235046933848 NA intron (NM_146107, intron 1 of 10) intron (NM_146107, intron 1 of 10) 856 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-6 chr14 69685860 69686098 + 0.307235046933848 NA intron (NM_033325, intron 10 of 13) intron (NM_033325, intron 10 of 13) -6269 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-5 chr11 116854069 116854364 + 0.307235046933848 NA intron (NM_178620, intron 1 of 12) intron (NM_178620, intron 1 of 12) 216 NM_001361586 69900 Mm.348004 NM_178620 ENSMUSG00000020818 Mfsd11 2600014M03Rik major facilitator superfamily domain containing 11 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-3 chr11 101070345 101070614 + 0.307235046933848 NA exon (NM_013792, exon 1 of 6) exon (NM_013792, exon 1 of 6) 385 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-14 chr3 70804222 70804528 + 0.307235046933848 NA intron (NR_040556, intron 1 of 3) intron (NR_040556, intron 1 of 3) 2916 NR_040556 625901 Mm.366028 NR_040556 ENSMUSG00000097252 Gm6634 EG625901 predicted gene 6634 ncRNA common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-9 chr17 35557185 35557407 + 0.307235046933848 NA TTS (NM_001355275) TTS (NM_001355275) 5168 NM_001008424 386463 Mm.426664 NM_001008424 ENSMUSG00000039518 Cdsn AI747712 corneodesmosin protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-25 chr8 106526781 106527090 + 0.307235046933848 NA intron (NM_007665, intron 2 of 15) intron (NM_007665, intron 2 of 15) 16083 NM_001037809 12560 Mm.4658 NM_007665 ENSMUSG00000061048 Cdh3 AI385538|Cadp|Cdhp|P-cadherin|Pcad cadherin 3 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-11 chr5 76974269 76974504 + 0.307235046933848 NA promoter-TSS (NM_025691) promoter-TSS (NM_025691) -315 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-12 chr18 46676627 46676936 + 0.307235046933848 NA Intergenic Intergenic 51721 NM_033037 12583 Mm.241056 NM_033037 ENSMUSG00000033022 Cdo1 1300002L19Rik|Cdo|D18Ucla3 cysteine dioxygenase 1, cytosolic protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-15 chr7 144945709 144946036 + 0.307235046933848 NA Intergenic Intergenic -5947 NM_007631 12443 Mm.273049 NM_007631 ENSMUSG00000070348 Ccnd1 AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1 cyclin D1 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-6 chr5 137071679 137071963 + 0.307235046933848 NA intron (NM_008871, intron 1 of 8) intron (NM_008871, intron 1 of 8) 451 NM_008871 18787 Mm.250422 NM_008871 ENSMUSG00000037411 Serpine1 PAI-1|PAI1|Planh1 serine (or cysteine) peptidase inhibitor, clade E, member 1 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-10 chr16 86302733 86303042 + 0.307235046933848 NA Intergenic Intergenic -401762 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-21 chr5 136245094 136245336 + 0.307235046933848 NA promoter-TSS (NM_001302939) promoter-TSS (NM_001302939) -275 NM_018825 23921 Mm.425294 NM_018825 ENSMUSG00000005057 Sh2b2 Aps SH2B adaptor protein 2 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-12 chr18 32162272 32162685 + 0.307235046933848 NA promoter-TSS (NM_011946) promoter-TSS (NM_011946) -611 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-20 chr9 21852212 21852565 + 0.307235046933848 NA intron (NM_177030, intron 1 of 49) CpG 247 NM_177030 319899 Mm.128153 NM_177030 ENSMUSG00000032198 Dock6 2410095B20Rik|4931431C02Rik|C330023D02Rik|mKIAA1395 dedicator of cytokinesis 6 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848 chr11 95858339 95858562 + 0.307235046933848 NA promoter-TSS (NR_045187) promoter-TSS (NR_045187) -367 NR_045187 73906 Mm.399894 NR_045187 ENSMUSG00000086015 4833417C18Rik - RIKEN cDNA 4833417C18 gene ncRNA common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-18 chr7 29168884 29169315 + 0.307235046933848 NA promoter-TSS (NM_182927) promoter-TSS (NM_182927) -452 NM_182927 101809 Mm.377262 NM_182927 ENSMUSG00000037239 Spred3 AW047143|D130060H24Rik|Spred-3 sprouty-related, EVH1 domain containing 3 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-14 chr7 109985817 109986006 + 0.307235046933848 NA intron (NM_153525, intron 1 of 6) intron (NM_153525, intron 1 of 6) 319 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-26 chr9 55126684 55127203 + 0.307235046933848 NA Intergenic Intergenic -22426 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-2 chr11 69323043 69323486 + 0.307235046933848 NA promoter-TSS (NM_001024206) promoter-TSS (NM_001024206) 609 NM_172560 216846 Mm.28774 NM_172560 ENSMUSG00000032782 Cntrob 9830165K03Rik|Lip8|Nip2 centrobin, centrosomal BRCA2 interacting protein protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-3 chr10 96686265 96686679 + 0.307235046933848 NA Intergenic Intergenic 69471 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-18 chr4 107890308 107890602 + 0.307235046933848 NA intron (NM_028754, intron 1 of 6) ID_B1|SINE|B4 556 NM_028754 74098 Mm.274853 NM_028754 ENSMUSG00000028608 0610037L13Rik 1110008H16Rik RIKEN cDNA 0610037L13 gene protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-11 chr17 78521419 78521783 + 0.307235046933848 NA intron (NM_001197028, intron 1 of 12) intron (NM_001197028, intron 1 of 12) 13538 NM_028813 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-10 chr5 31602791 31602996 + 0.307235046933848 NA Intergenic Intergenic -11058 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-8 chr17 5132864 5133067 + 0.307235046933848 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 137891 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-9 chr15 27923366 27923585 + 0.307235046933848 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 102373 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-8 chr15 77836227 77836648 + 0.307235046933848 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 5738 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-15 chr6 112211481 112211797 + 0.307235046933848 NA intron (NR_027865, intron 2 of 2) intron (NR_027865, intron 2 of 2) 931 NR_027865 67336 Mm.378014 NR_027865 ENSMUSG00000100219 1700054K19Rik - RIKEN cDNA 1700054K19 gene ncRNA common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-16 chr5 66150773 66151191 + 0.307235046933848 NA promoter-TSS (NM_001291226) promoter-TSS (NM_001291226) -4 NM_178446 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-21 chrX 6414938 6415261 + 0.307235046933848 NA promoter-TSS (NM_001313764) promoter-TSS (NM_001313764) -643 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-3 chr10 128337358 128337553 + 0.307235046933848 NA promoter-TSS (NM_026444) promoter-TSS (NM_026444) -272 NM_026444 12974 Mm.58836 NM_026444 ENSMUSG00000005683 Cs 2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis citrate synthase protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-20 chr9 124464792 124465058 + 0.307235046933848 NA Intergenic Intergenic 11937 NM_001163415 19054 Mm.271249 NM_011154 ENSMUSG00000093803 Ppp2r3d PP2A B''-PR59|PP2A PR59|PR59|Ppp2r3|Ppp2r3a protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta protein-coding unique_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-2 chr4 126468227 126468524 + 0.307235046933848 NA intron (NM_153403, intron 1 of 18) intron (NM_153403, intron 1 of 18) 208 NM_001317174 236511 Mm.30800 NM_153403 ENSMUSG00000041530 Ago1 Eif2c1 argonaute RISC catalytic subunit 1 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-4 chr13 41606034 41606372 + 0.307235046933848 NA promoter-TSS (NM_001163572) promoter-TSS (NM_001163572) -13 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-3 chr13 15537643 15537889 + 0.307235046933848 NA intron (NM_008130, intron 2 of 14) intron (NM_008130, intron 2 of 14) 74043 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-10 chr17 46628767 46629075 + 0.307235046933848 NA intron (NM_175168, intron 1 of 19) CpG 583 NM_175168 71461 Mm.181833 NM_175168 ENSMUSG00000023972 Ptk7 8430404F20Rik|chz|mPTK7/CCK4 PTK7 protein tyrosine kinase 7 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-12 chr17 26514399 26514671 + 0.307235046933848 NA Intergenic Intergenic -6063 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-8 chr7 90319295 90319620 + 0.307235046933848 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 17102 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-19 chr5 43555694 43556000 + 0.307235046933848 NA intron (NM_001135172, intron 1 of 2) intron (NM_001135172, intron 1 of 2) 40278 NM_001135172 109323 Mm.275553 NM_175425 ENSMUSG00000061535 C1qtnf7 5530401N20Rik|8430425G24Rik|Ctrp7 C1q and tumor necrosis factor related protein 7 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-15 chr3 60500514 60500940 + 0.307235046933848 NA promoter-TSS (NM_001253710) promoter-TSS (NM_001253710) -452 NM_001253710 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-2 chr1 163402825 163403147 + 0.307235046933848 NA intron (NM_178883, intron 1 of 4) intron (NM_178883, intron 1 of 4) 683 NR_132627 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-6 chr11 117962342 117962607 + 0.307235046933848 NA Intergenic Intergenic 6892 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-15 chr4 45138256 45138542 + 0.307235046933848 NA Intergenic Intergenic -30286 NM_001099675 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-4 chr12 112950902 112951191 + 0.307235046933848 NA Intergenic Intergenic -8904 NM_001316724 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-12 chr6 72543563 72543776 + 0.307235046933848 NA promoter-TSS (NM_001271415) promoter-TSS (NM_001271415) -722 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-18 chr7 141563360 141563701 + 0.307235046933848 NA intron (NM_001357068, intron 1 of 21) intron (NM_001357068, intron 1 of 21) 1350 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-13 chr2 37423229 37423509 + 0.307235046933848 NA promoter-TSS (NM_001290642) promoter-TSS (NM_001290642) -466 NM_001290642 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding unique_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-3 chr9 64633655 64633929 + 0.307235046933848 NA intron (NM_001134399, intron 5 of 24) intron (NM_001134399, intron 5 of 24) 103964 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding unique_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848 chr10 24870134 24870341 + 0.307235046933848 NA intron (NM_001166416, intron 1 of 29) CpG 251 NM_027347 70208 Mm.28020 NM_027347 ENSMUSG00000019984 Med23 130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216 mediator complex subunit 23 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-2 chr19 37560018 37560375 + 0.307235046933848 NA intron (NM_175353, intron 1 of 21) intron (NM_175353, intron 1 of 21) 9778 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-2 chr1 176813053 176813305 + 0.307235046933848 NA Intergenic Intergenic -1481 NR_151682 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding unique_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848 chr14 53634536 53635093 + 0.307235046933848 NA Intergenic Intergenic -595348 NR_155501 102632039 Mm.410779 NR_155501 Gm30214 - predicted gene, 30214 ncRNA common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-20 chr5 92372256 92372598 + 0.307235046933848 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -9131 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-17 chr7 28940011 28940237 + 0.307235046933848 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 22208 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-5 chr13 50977138 50977440 + 0.307235046933848 NA Intergenic Intergenic 123438 NR_029463 77428 Mm.405630 NR_029463 9430083A17Rik - RIKEN cDNA 9430083A17 gene ncRNA common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-16 chr4 4792083 4792412 + 0.307235046933848 NA intron (NM_177730, intron 1 of 4) intron (NM_177730, intron 1 of 4) 1059 NM_177730 242291 Mm.218889 NM_177730 ENSMUSG00000066324 Impad1 1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP inositol monophosphatase domain containing 1 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-8 chr15 58164426 58164672 + 0.307235046933848 NA Intergenic B1_Mur4|SINE|Alu 23183 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848 chr1 51478026 51478295 + 0.307235046933848 NA 5' UTR (NM_028696, exon 1 of 6) 5' UTR (NM_028696, exon 1 of 6) 239 NM_001310548 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-14 chr4 155136106 155136366 + 0.307235046933848 NA intron (NM_001081100, intron 12 of 13) intron (NM_001081100, intron 12 of 13) 49632 NM_001356327 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-2 chr1 184074921 184075269 + 0.307235046933848 NA 3' UTR (NM_022019, exon 4 of 4) 3' UTR (NM_022019, exon 4 of 4) 40714 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-9 chr16 30502998 30503226 + 0.307235046933848 NA Intergenic Intergenic 47466 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-3 chr19 46523145 46523497 + 0.307235046933848 NA Intergenic Intergenic 21673 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-17 chr6 85936542 85936878 + 0.307235046933848 NA Intergenic Intergenic 20739 NM_001362065 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding unique_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-3 chr4 131914964 131915179 + 0.307235046933848 NA intron (NR_102394, intron 2 of 2) intron (NR_102394, intron 2 of 2) 4958 NR_102394 545681 Mm.2478 NR_102393 ENSMUSG00000085667 Gm12992 - predicted gene 12992 ncRNA common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-13 chr2 6548583 6548877 + 0.307235046933848 NA intron (NM_001310447, intron 10 of 11) intron (NM_001310447, intron 10 of 11) 172932 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-7 chr15 75842153 75842380 + 0.307235046933848 NA promoter-TSS (NM_172121) promoter-TSS (NM_172121) -358 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-4 chr11 19017998 19018290 + 0.307235046933848 NA intron (NM_010789, intron 1 of 11) intron (NM_010789, intron 1 of 11) 825 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-8 chr14 99045834 99046049 + 0.307235046933848 NA promoter-TSS (NM_175265) promoter-TSS (NM_175265) 195 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-5 chr13 45749314 45749644 + 0.307235046933848 NA intron (NM_001199304, intron 4 of 6) intron (NM_001199304, intron 4 of 6) 215512 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-17 chr4 16163151 16163382 + 0.307235046933848 NA promoter-TSS (NR_045765) promoter-TSS (NR_045765) 377 NM_138952 192656 Mm.112765 NM_138952 ENSMUSG00000041135 Ripk2 2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2 receptor (TNFRSF)-interacting serine-threonine kinase 2 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-5 chr11 33860524 33860864 + 0.307235046933848 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -17109 NM_001290690 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-13 chr2 11501559 11501821 + 0.307235046933848 NA exon (NM_001177752, exon 1 of 14) exon (NM_001177752, exon 1 of 14) 400 NM_001177754 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-22 chr6 50420400 50420636 + 0.307235046933848 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 35652 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-14 chr2 102947290 102947544 + 0.307235046933848 NA Intergenic Intergenic -45752 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-6 chr13 45924980 45925354 + 0.307235046933848 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 39824 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-10 chr17 44238994 44239330 + 0.307235046933848 NA intron (NM_172621, intron 2 of 5) intron (NM_172621, intron 2 of 5) 50590 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg|nmf318 chloride intracellular channel 5 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-19 chr9 49055644 49055905 + 0.307235046933848 NA exon (NM_012039, exon 1 of 16) exon (NM_012039, exon 1 of 16) 193 NM_012039 26951 Mm.24791 NM_012039 ENSMUSG00000032264 Zw10 6330566F14Rik|MmZw10 zw10 kinetochore protein protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848 chr1 77495977 77496359 + 0.307235046933848 NA TTS (NR_105770) TTS (NR_105770) 600 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-4 chr11 101767625 101767948 + 0.307235046933848 NA TTS (NM_144831) TTS (NM_144831) 17524 NM_008815 18612 Mm.5025 NM_008815 ENSMUSG00000017724 Etv4 AW414408|Pea-3|Pea3 ets variant 4 protein-coding common_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848 chr11 30985828 30986224 + 0.307235046933848 NA intron (NM_026527, intron 1 of 2) intron (NM_026527, intron 1 of 2) 339 NM_026527 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-7 chr13 67081485 67081843 + 0.307235046933848 NA promoter-TSS (NM_001012448) promoter-TSS (NM_001012448) -119 NM_001292066 432769 Mm.458849 NM_001012325 ENSMUSG00000058883 Zfp708 Rslcan11 zinc finger protein 708 protein-coding unique_peak2_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-4 chr2 158794957 158795262 + 0.307235046933848 NA intron (NM_145742, intron 1 of 20) intron (NM_145742, intron 1 of 20) 302 NM_001291144 71715 Mm.315652 NM_145742 ENSMUSG00000027655 Dhx35 1200009D07Rik|Ddx35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 protein-coding unique_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-2 chr8 70767273 70767542 + 0.307235046933848 NA promoter-TSS (NM_023065) promoter-TSS (NM_023065) -744 NM_023065 65972 Mm.30241 NM_023065 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak1_19_18_-0.198230570471911_4.14881222820763_0.307235046933848-7 chr15 79140809 79141033 + 0.307235046933848 NA promoter-TSS (NM_027231) promoter-TSS (NM_027231) 330 NM_001310581 27660 Mm.390827 NM_138581 ENSMUSG00000033029 1700088E04Rik ESTJ0827E04 RIKEN cDNA 1700088E04 gene protein-coding common_peak2_20_18_-0.128337837850961_4.18375859451811_0.307235046933848-19 chr8 110826145 110826490 + 0.307235046933848 NA intron (NM_133953, intron 11 of 25) intron (NM_133953, intron 11 of 25) 12281 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-17 chr17 51179450 51179672 + 0.307235046933845 NA promoter-TSS (NM_001285991) promoter-TSS (NM_001285991) -209 NM_001285991 72238 Mm.120650 NM_028162 ENSMUSG00000023923 Tbc1d5 1600014N05Rik TBC1 domain family, member 5 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-5 chr3 38256483 38256884 + 0.307235046933845 NA Intergenic Intergenic -48564 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-19 chr19 18810773 18811012 + 0.307235046933845 NA intron (NM_153417, intron 14 of 38) intron (NM_153417, intron 14 of 38) 60909 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-26 chr9 92272807 92273066 + 0.307235046933845 NA TTS (NM_011636) TTS (NM_011636) -2666 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-14 chr5 23386705 23386925 + 0.307235046933845 NA Intergenic Intergenic 47538 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-4 chr11 96413186 96413525 + 0.307235046933845 NA Intergenic Intergenic 47597 NM_008266 15407 Mm.890 NM_008266 ENSMUSG00000018973 Hoxb1 Hox-2.9 homeobox B1 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-14 chr16 32665874 32666202 + 0.307235046933845 NA non-coding (NR_033493, exon 2 of 3) non-coding (NR_033493, exon 2 of 3) 2159 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-23 chr8 122527906 122528162 + 0.307235046933845 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 23295 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-15 chr5 65199079 65199384 + 0.307235046933845 NA promoter-TSS (NM_153391) promoter-TSS (NM_153391) -465 NM_001359880 213081 Mm.127550 NM_153391 ENSMUSG00000037890 Wdr19 C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638 WD repeat domain 19 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-25 chr9 59311465 59311746 + 0.307235046933845 NA intron (NM_001359282, intron 4 of 6) intron (NM_001359282, intron 4 of 6) 20033 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-3 chr11 75678804 75679014 + 0.307235046933845 NA promoter-TSS (NM_001277221) promoter-TSS (NM_001277221) -350 NM_001277219 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-21 chr5 65199106 65199393 + 0.307235046933845 NA promoter-TSS (NM_153391) promoter-TSS (NM_153391) -447 NM_001359880 213081 Mm.127550 NM_153391 ENSMUSG00000037890 Wdr19 C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638 WD repeat domain 19 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-7 chr11 8465457 8465804 + 0.307235046933845 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 198905 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-13 chr15 36376521 36376984 + 0.307235046933845 NA Intergenic Intergenic -93605 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-3 chr2 33131416 33131956 + 0.307235046933845 NA promoter-TSS (NM_001355201) promoter-TSS (NM_001355201) -250 NM_001355201 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-9 chr9 78520803 78521189 + 0.307235046933845 NA Intergenic Intergenic -39272 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-2 chr1 43151762 43151994 + 0.307235046933845 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 12083 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-8 chr8 44986239 44986494 + 0.307235046933845 NA intron (NM_001081286, intron 1 of 25) B1F2|SINE|Alu 36158 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-10 chr14 25535633 25535988 + 0.307235046933845 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) 1371 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-7 chr3 101713595 101713794 + 0.307235046933845 NA Intergenic Intergenic -108987 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-6 chr10 99243945 99244244 + 0.307235046933845 NA Intergenic Intergenic -19137 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-26 chr9 108461265 108461678 + 0.307235046933845 NA 5' UTR (NM_030075, exon 1 of 11) 5' UTR (NM_030075, exon 1 of 11) 110 NM_030075 78267 Mm.283194 NM_030075 ENSMUSG00000032609 Klhdc8b 4931406O17Rik kelch domain containing 8B protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-6 chr12 80379496 80379740 + 0.307235046933845 NA intron (NM_177267, intron 5 of 8) intron (NM_177267, intron 5 of 8) 12059 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-24 chr9 43874061 43874329 + 0.307235046933845 NA Intergenic Intergenic 129619 NM_021424 58235 Mm.335096 NM_021424 ENSMUSG00000032012 Nectin1 AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|Pvrl1|nectin-1 nectin cell adhesion molecule 1 protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-8 chr8 11203969 11204221 + 0.307235046933845 NA intron (NM_009931, intron 49 of 51) intron (NM_009931, intron 49 of 51) -108710 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-3 chr10 76874355 76874590 + 0.307235046933845 NA intron (NM_001347216, intron 2 of 15) intron (NM_001347216, intron 2 of 15) -51660 NR_152849 59093 Mm.272803 NM_021568 ENSMUSG00000001120 Pcbp3 AlphaCP-3 poly(rC) binding protein 3 protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845 chr11 88214185 88214554 + 0.307235046933845 NA Intergenic Intergenic 9981 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-12 chr3 89861494 89861825 + 0.307235046933845 NA Intergenic Intergenic 30289 NM_172530 214547 Mm.225 NM_172530 ENSMUSG00000046280 She 9430022A14 src homology 2 domain-containing transforming protein E protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-2 chr13 51965227 51965475 + 0.307235046933845 NA Intergenic Intergenic 118676 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-12 chr14 76738797 76739223 + 0.307235046933845 NA Intergenic Intergenic -21121 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845 chr1 10955568 10955911 + 0.307235046933845 NA Intergenic Intergenic -37726 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-2 chr1 81950934 81951291 + 0.307235046933845 NA Intergenic Intergenic -180804 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-18 chr18 43393545 43393858 + 0.307235046933845 NA promoter-TSS (NM_009468) promoter-TSS (NM_009468) -324 NM_009468 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-11 chr14 52304402 52304686 + 0.307235046933845 NA intron (NM_019721, intron 1 of 10) intron (NM_019721, intron 1 of 10) 580 NM_019721 56335 Mm.271759 NM_019721 ENSMUSG00000022160 Mettl3 2310024F18Rik|M6A|Spo8 methyltransferase like 3 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-18 chr6 34749029 34749445 + 0.307235046933845 NA intron (NM_145575, intron 3 of 11) intron (NM_145575, intron 3 of 11) -31195 NM_001289658 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-9 chr15 57752695 57752900 + 0.307235046933845 NA intron (NM_199449, intron 1 of 3) intron (NM_199449, intron 1 of 3) 58130 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-5 chr5 115652443 115652738 + 0.307235046933845 NA intron (NR_151599, intron 8 of 10) intron (NR_151599, intron 8 of 10) 996 NR_151601 75665 Mm.233914 NM_001080808 ENSMUSG00000041609 Bicdl1 2210403N09Rik|BICDR-1|Ccdc64 BICD family like cargo adaptor 1 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-5 chr11 103101640 103101901 + 0.307235046933845 NA promoter-TSS (NM_025988) promoter-TSS (NM_025988) 82 NM_025988 67131 Mm.390367 NM_025988 ENSMUSG00000056938 Acbd4 2010009P05Rik|2010015A21Rik|AI849317 acyl-Coenzyme A binding domain containing 4 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-20 chr4 155174602 155174891 + 0.307235046933845 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 47789 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845 chr12 69582677 69582987 + 0.307235046933845 NA TTS (NM_001135559) TTS (NM_001135559) 196 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-8 chr14 31435683 31436113 + 0.307235046933845 NA exon (NM_011894, exon 1 of 9) exon (NM_011894, exon 1 of 9) 202 NM_011894 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-19 chr6 34865942 34866269 + 0.307235046933845 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 2959 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-24 chr8 117342440 117342900 + 0.307235046933845 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -6500 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-4 chr4 40267989 40268282 + 0.307235046933845 NA intron (NM_134097, intron 2 of 2) intron (NM_134097, intron 2 of 2) -1444 NM_001349093 100504309 Mm.392019 NM_001349093 Smim27 2010003O02Rik|Toporsos small integral membrane protein 27 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-9 chr8 106149960 106150221 + 0.307235046933845 NA promoter-TSS (NM_133792) promoter-TSS (NM_133792) -264 NM_133792 192654 Mm.284770 NM_133792 ENSMUSG00000031903 Pla2g15 ACS|C87498|LLPL|Lpla2|Lypla3 phospholipase A2, group XV protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-10 chr18 50096283 50096515 + 0.307235046933845 NA Intergenic Intergenic -31802 NM_008292 15488 Mm.277857 NM_008292 ENSMUSG00000024507 Hsd17b4 17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2 hydroxysteroid (17-beta) dehydrogenase 4 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-8 chr12 99357457 99357737 + 0.307235046933845 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 92477 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-4 chr10 88730492 88730705 + 0.307235046933845 NA promoter-TSS (NM_025859) promoter-TSS (NM_025859) 503 NM_001037166 237433 Mm.478763 NM_001037166 Gm4925 EG237433 predicted gene 4925 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-4 chr18 61361119 61361461 + 0.307235046933845 NA intron (NM_133249, intron 1 of 11) intron (NM_133249, intron 1 of 11) 36610 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-16 chr17 47695198 47695597 + 0.307235046933845 NA promoter-TSS (NM_001290337) promoter-TSS (NM_001290337) 190 NM_144939 107971 Mm.392206 NM_144939 ENSMUSG00000023266 Frs3 4930417B13Rik|AI449674|Frs2beta|Snt2 fibroblast growth factor receptor substrate 3 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-11 chr19 45017639 45017969 + 0.307235046933845 NA promoter-TSS (NM_001130526) promoter-TSS (NM_001130526) -331 NM_001130526 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-7 chr12 99356990 99357254 + 0.307235046933845 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 92952 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-2 chr17 25538695 25538994 + 0.307235046933845 NA Intergenic Intergenic 20255 NR_155500 102636737 Mm.384127 NR_155500 Gm33727 - predicted gene, 33727 ncRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-25 chr8 122139673 122139882 + 0.307235046933845 NA Intergenic Intergenic -142364 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-22 chr7 99535675 99536049 + 0.307235046933845 NA intron (NM_178220, intron 1 of 14) CpG 376 NM_177231 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-16 chr5 92816961 92817337 + 0.307235046933845 NA intron (NM_001077595, intron 1 of 9) intron (NM_001077595, intron 1 of 9) 7767 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-3 chr17 65774023 65774490 + 0.307235046933845 NA Intergenic Intergenic -1504 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-15 chr17 35770829 35771140 + 0.307235046933845 NA Intergenic Intergenic -1466 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-9 chr13 51966168 51966462 + 0.307235046933845 NA Intergenic Intergenic 119640 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-17 chr5 140767116 140767471 + 0.307235046933845 NA intron (NM_010302, intron 2 of 3) intron (NM_010302, intron 2 of 3) 43166 NM_173405 231842 Mm.491298 NM_173405 ENSMUSG00000050022 Amz1 5330426I05|6530401C20Rik archaelysin family metallopeptidase 1 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-10 chrX 12840804 12841412 + 0.307235046933845 NA Intergenic Intergenic 78830 NR_045852 552913 Mm.216846 NR_045852 ENSMUSG00000085891 Gm14634 - predicted gene 14634 ncRNA unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-6 chr6 91515374 91515686 + 0.307235046933845 NA promoter-TSS (NM_026309) promoter-TSS (NM_026309) 358 NM_009531 22591 Mm.2806 NM_009531 ENSMUSG00000030094 Xpc - xeroderma pigmentosum, complementation group C protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-21 chr7 80442156 80442618 + 0.307235046933845 NA Intergenic Intergenic -36951 NM_001081454 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-23 chr8 68011811 68012110 + 0.307235046933845 NA Intergenic Intergenic -37386 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-6 chr3 100921698 100921976 + 0.307235046933845 NA promoter-TSS (NM_001165953) promoter-TSS (NM_001165953) -656 NM_001165952 229644 Mm.189351 NM_194343 ENSMUSG00000033233 Trim45 4921530N01Rik tripartite motif-containing 45 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-5 chr10 94515000 94515305 + 0.307235046933845 NA intron (NM_172051, intron 1 of 3) CpG 295 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-13 chr4 63402575 63402986 + 0.307235046933845 NA intron (NM_001045514, intron 1 of 21) intron (NM_001045514, intron 1 of 21) 665 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding unique_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-7 chr7 45682375 45682766 + 0.307235046933845 NA intron (NM_001271578, intron 3 of 3) intron (NM_001271578, intron 3 of 3) -1452 NM_001358870 243967 Mm.291240 NM_001033356 ENSMUSG00000070564 Ntn5 Gm484 netrin 5 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845 chr1 9546497 9546989 + 0.307235046933845 NA 3' UTR (NM_021511, exon 1 of 1) 3' UTR (NM_021511, exon 1 of 1) -1205 NM_175236 76187 Mm.28514 NM_175236 ENSMUSG00000025911 Adhfe1 6330565B14Rik|AI043035|Adh8|HOT alcohol dehydrogenase, iron containing, 1 protein-coding common_peak2_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-20 chr7 28392188 28392508 + 0.307235046933845 NA promoter-TSS (NM_019458) promoter-TSS (NM_019458) 342 NM_026042 67224 Mm.41647 NM_026042 ENSMUSG00000003444 Med29 2810405O22Rik|AU020902|Ixl mediator complex subunit 29 protein-coding common_peak1_21_17_0.0163053807279923_4.17807769180631_0.307235046933845-22 chr6 98959910 98960307 + 0.307235046933845 NA intron (NM_001197321, intron 10 of 17) intron (NM_001197321, intron 10 of 17) 68190 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_83_71_-0.0644452849961761_6.13770235894422_0.307234413593021 chr10 81384433 81385097 + 0.307234413593021 NA intron (NM_133964, intron 1 of 4) ID_B1|SINE|B4 337 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak1_86_69_0.0264656066597544_6.14251582027484_0.307234413593021 chr2 163801390 163802145 + 0.307234413593021 NA Intergenic Intergenic -19067 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak2_83_71_-0.0644452849961761_6.13770235894422_0.307234413593021 chr7 141901420 141902384 + 0.307234413593021 NA intron (NM_001347562, intron 1 of 6) intron (NM_001347562, intron 1 of 6) 559 NM_023764 54473 Mm.103551 NM_023764 ENSMUSG00000025139 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein protein-coding common_peak2_86_69_0.0264656066597544_6.14251582027484_0.307234413593021 chr7 144037574 144038252 + 0.307234413593021 NA Intergenic Intergenic 28659 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_191_159_-0.032217387161845_7.30581940130644_0.307234296341719 chr10 128058100 128059631 + 0.307234296341719 NA promoter-TSS (NM_019766) promoter-TSS (NM_019766) -117 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 protein-coding common_peak1_191_159_-0.032217387161845_7.30581940130644_0.307234296341719-2 chr7 142433556 142435945 + 0.307234296341719 NA promoter-TSS (NM_001285858) promoter-TSS (NM_001285858) -100 NR_153437 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding common_peak1_85_72_-0.0506370082438288_6.1645060547581_0.307147021604589-2 chr17 23828021 23828965 + 0.307147021604589 NA intron (NM_026305, intron 2 of 3) intron (NM_026305, intron 2 of 3) 616 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding common_peak1_84_72_-0.0673917823629315_6.15612866769855_0.307147021604589 chr14 29081036 29082103 + 0.307147021604589 NA intron (NM_009785, intron 17 of 37) intron (NM_009785, intron 17 of 37) 63361 NM_176920 319476 Mm.95780 NM_176920 ENSMUSG00000045776 Lrtm1 A930016D02Rik leucine-rich repeats and transmembrane domains 1 protein-coding common_peak2_84_72_-0.0673917823629315_6.15612866769855_0.307147021604589-2 chr8 25753742 25754676 + 0.307147021604589 NA promoter-TSS (NM_028102) promoter-TSS (NM_028102) 71 NM_028102 72108 Mm.246875 NM_028102 ENSMUSG00000061313 Ddhd2 2010305K11Rik|SAMWD1|mKIAA0725 DDHD domain containing 2 protein-coding common_peak2_87_70_0.0223733035191334_6.16093377126425_0.307147021604589-3 chr18 33291161 33292531 + 0.307147021604589 NA Intergenic Intergenic -77984 NM_001347624 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak2_84_72_-0.0673917823629315_6.15612866769855_0.307147021604589 chr16 13779927 13781164 + 0.307147021604589 NA promoter-TSS (NM_001039521) promoter-TSS (NM_001039521) -154 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding common_peak2_87_70_0.0223733035191334_6.16093377126425_0.307147021604589-2 chr17 25239725 25240846 + 0.307147021604589 NA promoter-TSS (NM_001346737) promoter-TSS (NM_001346737) 115 NM_026676 68327 Mm.180687 NM_026676 ENSMUSG00000015126 Tsr3 0610007P22Rik|1110014B11Rik|AL022759 TSR3 20S rRNA accumulation protein-coding common_peak1_85_72_-0.0506370082438288_6.1645060547581_0.307147021604589 chr15 52928019 52928994 + 0.307147021604589 NA Intergenic Intergenic 216061 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_87_70_0.0223733035191334_6.16093377126425_0.307147021604589-4 chr8 120000907 120001726 + 0.307147021604589 NA intron (NM_001310635, intron 1 of 14) intron (NM_001310635, intron 1 of 14) 8878 NM_001310635 78892 Mm.264680 NM_030209 ENSMUSG00000031825 Crispld2 1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp cysteine-rich secretory protein LCCL domain containing 2 protein-coding common_peak2_87_70_0.0223733035191334_6.16093377126425_0.307147021604589 chr14 16364934 16365737 + 0.307147021604589 NA 5' UTR (NM_009409, exon 1 of 36) 5' UTR (NM_009409, exon 1 of 36) 129 NM_009409 21974 Mm.130362 NM_009409 ENSMUSG00000017485 Top2b D230016L12Rik|Top-2 topoisomerase (DNA) II beta protein-coding common_peak2_194_162_-0.0368074379411185_7.33032443526052_0.307118324695954 chr18 68118002 68119756 + 0.307118324695954 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -109067 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_86_73_-0.0537047420242294_6.18260099461684_0.307062057408912 chr19 4217930 4218663 + 0.307062057408912 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 3907 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak2_88_71_0.0183822249576151_6.17911611392112_0.307062057408912 chr1 185204180 185205093 + 0.307062057408912 NA intron (NM_001163754, intron 1 of 34) intron (NM_001163754, intron 1 of 34) 468 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak1_86_73_-0.0537047420242294_6.18260099461684_0.307062057408912 chr2 129199501 129200762 + 0.307062057408912 NA intron (NM_015747, intron 2 of 10) intron (NM_015747, intron 2 of 10) 1358 NM_001159593 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_86_73_-0.0537047420242294_6.18260099461684_0.307062057408912-2 chr6 91211033 91211966 + 0.307062057408912 NA Intergenic Intergenic -1265 NM_001081437 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_352_290_-0.0228009986974111_8.17347484355958_0.307061911950405 chr19 8990426 8993725 + 0.307061911950405 NA intron (NM_001039959, intron 1 of 5) intron (NM_001039959, intron 1 of 5) 2791 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_197_164_-0.0325305867670904_7.35005692086227_0.307043389274108 chr11 77686248 77687837 + 0.307043389274108 NA intron (NM_001024205, intron 1 of 3) CpG 903 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding common_peak2_87_74_-0.0566982674720649_6.20046955675985_0.30697942122102 chr12 59130833 59131930 + 0.30697942122102 NA promoter-TSS (NM_001165253) promoter-TSS (NM_001165253) -72 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak1_89_72_0.0144886089733216_6.19706886336668_0.30697942122102 chr4 11006985 11007588 + 0.30697942122102 NA intron (NM_175175, intron 1 of 1) CpG 333 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding common_peak2_87_74_-0.0566982674720649_6.20046955675985_0.30697942122102-2 chr15 12205172 12205653 + 0.30697942122102 NA intron (NM_001356498, intron 1 of 15) CpG 384 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak2_89_72_0.0144886089733216_6.19706886336668_0.30697942122102 chr12 102469292 102470026 + 0.30697942122102 NA promoter-TSS (NM_013747) promoter-TSS (NM_013747) -251 NM_013747 27277 Mm.273370 NM_013747 ENSMUSG00000021192 Golga5 Ret-II golgi autoantigen, golgin subfamily a, 5 protein-coding common_peak2_89_72_0.0144886089733216_6.19706886336668_0.30697942122102-2 chr3 158030916 158031809 + 0.30697942122102 NA intron (NM_001093752, intron 2 of 12) CpG 410 NM_001356997 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak1_203_163_0.0190044957993338_7.36705425251775_0.306970276066489 chr8 123041269 123042193 + 0.306970276066489 NA promoter-TSS (NR_045268) promoter-TSS (NR_045268) 553 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-3 chr14 69327472 69327838 + 0.306899554715735 NA Intergenic Intergenic 9482 NR_045091 100504477 Mm.396396 NR_045091 ENSMUSG00000097511 Gm16677 - predicted gene, 16677 ncRNA unique_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-3 chr7 72519049 72519330 + 0.306899554715735 NA Intergenic Intergenic -212594 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-2 chr15 74675149 74675460 + 0.306899554715735 NA Intergenic Intergenic -2734 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding unique_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-2 chr2 3283444 3283862 + 0.306899554715735 NA promoter-TSS (NM_001290370) promoter-TSS (NM_001290370) -559 NM_008708 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-8 chr2 11501539 11501848 + 0.306899554715735 NA exon (NM_001177752, exon 1 of 14) exon (NM_001177752, exon 1 of 14) 397 NM_001177754 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-7 chr2 32775102 32775366 + 0.306899554715735 NA promoter-TSS (NM_178595) promoter-TSS (NM_178595) 105 NM_001290564 338348 Mm.475130 NM_177384 ENSMUSG00000039021 Ttc16 1200002K10Rik tetratricopeptide repeat domain 16 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-13 chr4 64047482 64047745 + 0.306899554715735 NA promoter-TSS (NM_011607) promoter-TSS (NM_011607) -598 NM_011607 21923 Mm.980 NM_011607 ENSMUSG00000028364 Tnc AI528729|C130033P17Rik|Hxb|TN|TN-C|Ten|cytotactin|tenascin-C tenascin C protein-coding unique_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-4 chr9 72491829 72492250 + 0.306899554715735 NA promoter-TSS (NM_009359) promoter-TSS (NM_009359) -80 NM_009359 21778 Mm.14485 NM_009359 ENSMUSG00000090626 Tex9 Gm19407|tsec-1 testis expressed gene 9 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-4 chr17 47505275 47505628 + 0.306899554715735 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 400 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-5 chr19 5797035 5797279 + 0.306899554715735 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) -1176 NR_144621 109146451 NR_144621 Mascrna - Malat1-associated small cytoplasmic RNA scRNA common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-15 chr6 50110772 50111174 + 0.306899554715735 NA 5' UTR (NM_001361247, exon 1 of 13) 5' UTR (NM_001361247, exon 1 of 13) 113 NM_001361248 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-9 chr5 13974121 13974579 + 0.306899554715735 NA Intergenic Intergenic -50926 NM_011348 20349 Mm.134093 NM_011348 ENSMUSG00000063531 Sema3e 6430702L12|AA408817|Semah|mKIAA0331 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E protein-coding unique_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-3 chr7 79934909 79935229 + 0.306899554715735 NA intron (NM_027420, intron 1 of 5) intron (NM_027420, intron 1 of 5) 195 NM_027420 70420 Mm.34266 NM_027420 ENSMUSG00000039043 Arpin 2610034B18Rik actin-related protein 2/3 complex inhibitor protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-10 chr7 28955022 28955307 + 0.306899554715735 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 7168 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-4 chr15 101078798 101079204 + 0.306899554715735 NA Intergenic CpG -24602 NM_001214911 668225 Mm.385011 NM_001214911 ENSMUSG00000095440 Fignl2 EG668225 fidgetin-like 2 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-10 chr2 35234790 35235181 + 0.306899554715735 NA Intergenic Intergenic -21374 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-11 chr3 66293534 66293949 + 0.306899554715735 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 3096 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding unique_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-4 chr7 109629141 109629745 + 0.306899554715735 NA Intergenic Intergenic -12296 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-5 chr16 43462822 43463249 + 0.306899554715735 NA intron (NM_181058, intron 3 of 6) intron (NM_181058, intron 3 of 6) -42839 NR_046026 626693 Mm.447083 NR_046026 ENSMUSG00000085499 Gm15713 - predicted gene 15713 ncRNA common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-2 chr11 78372584 78372978 + 0.306899554715735 NA intron (NM_008238, intron 1 of 8) intron (NM_008238, intron 1 of 8) 13827 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-14 chr4 134669574 134669894 + 0.306899554715735 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 34556 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735 chr11 57720221 57720604 + 0.306899554715735 NA intron (NM_134189, intron 1 of 11) Charlie5|DNA|hAT-Charlie -70918 NR_153850 78762 Mm.362149 NR_153850 4933424L21Rik - RIKEN cDNA 4933424L21 gene ncRNA common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-9 chr2 26648474 26648731 + 0.306899554715735 NA Intergenic Intergenic -8358 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-11 chr8 47971392 47971665 + 0.306899554715735 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 19023 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-6 chr19 57200586 57201004 + 0.306899554715735 NA intron (NM_178688, intron 1 of 24) intron (NM_178688, intron 1 of 24) -3164 NM_001290816 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-3 chr15 33591050 33591351 + 0.306899554715735 NA intron (NM_176073, intron 7 of 7) intron (NM_176073, intron 7 of 7) 62236 NR_045070 75880 Mm.396109 NR_045070 ENSMUSG00000115779 4930592A05Rik - RIKEN cDNA 4930592A05 gene ncRNA unique_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735 chr10 80941080 80941374 + 0.306899554715735 NA Intergenic CT-rich|Low_complexity|Low_complexity 11136 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-5 chr9 23167965 23168270 + 0.306899554715735 NA Intergenic Intergenic -54959 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-12 chr3 94658984 94659302 + 0.306899554715735 NA promoter-TSS (NM_011656) promoter-TSS (NM_011656) -271 NM_011656 22156 Mm.10214 NM_011656 ENSMUSG00000005968 Tuft1 - tuftelin 1 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-7 chr18 12236087 12236395 + 0.306899554715735 NA 5' UTR (NM_008720, exon 1 of 25) 5' UTR (NM_008720, exon 1 of 25) 145 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm NPC intracellular cholesterol transporter 1 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-8 chr4 148140432 148140670 + 0.306899554715735 NA promoter-TSS (NM_027985) promoter-TSS (NM_027985) 61 NM_027985 71890 Mm.9648 NM_027985 ENSMUSG00000029003 Mad2l2 2310033C13Rik|G1-453-4|MAD2B|REV7|repro22 MAD2 mitotic arrest deficient-like 2 protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-2 chr12 33285632 33285892 + 0.306899554715735 NA Intergenic Intergenic -16753 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_21_19_-0.135697712717058_4.25407923852883_0.306899554715735 chr11 72508956 72509381 + 0.306899554715735 NA intron (NM_029932, intron 8 of 11) intron (NM_029932, intron 8 of 11) -19248 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding unique_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735 chr11 120698186 120698462 + 0.306899554715735 NA intron (NM_026877, intron 7 of 15) intron (NM_026877, intron 7 of 15) 15443 NM_016665 20892 Mm.259716 NM_016665 ENSMUSG00000025144 Cenpx Stra13 centromere protein X protein-coding common_peak2_21_19_-0.135697712717058_4.25407923852883_0.306899554715735-6 chr17 57249627 57249989 + 0.306899554715735 NA intron (NM_001242390, intron 1 of 14) intron (NM_001242390, intron 1 of 14) 357 NM_001242389 106628 Mm.37368 NM_134125 ENSMUSG00000019487 Trip10 AI646975|Cip4 thyroid hormone receptor interactor 10 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-5 chr11 18584744 18585070 + 0.306899554715732 NA Intergenic Intergenic 434062 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-6 chr8 106338262 106338538 + 0.306899554715732 NA promoter-TSS (NM_021491) promoter-TSS (NM_021491) -412 NM_021491 58994 Mm.23298 NM_021491 ENSMUSG00000031906 Smpd3 4631433G07Rik|AI427456|AW537966|fro|nSMase2 sphingomyelin phosphodiesterase 3, neutral protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732 chr1 74297130 74297395 + 0.306899554715732 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 7074 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-3 chr13 92354135 92354373 + 0.306899554715732 NA promoter-TSS (NM_010049) promoter-TSS (NM_010049) -529 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-13 chr4 150281100 150281312 + 0.306899554715732 NA promoter-TSS (NM_001085492) promoter-TSS (NM_001085492) -710 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-2 chr1 131152999 131153446 + 0.306899554715732 NA promoter-TSS (NM_001136070) promoter-TSS (NM_001136070) 15 NM_010709 16865 Mm.276294 NM_010709 ENSMUSG00000026427 Eif2d D1Ertd5e|Lgtn eukaryotic translation initiation factor 2D protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-10 chr4 84202720 84202980 + 0.306899554715732 NA Intergenic Intergenic -157971 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-19 chr7 130959595 130959811 + 0.306899554715732 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 23500 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-7 chr14 20155303 20155548 + 0.306899554715732 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 26357 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-17 chr6 54279573 54279887 + 0.306899554715732 NA intron (NM_001163640, intron 7 of 12) intron (NM_001163640, intron 7 of 12) 6908 NM_023543 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-21 chr8 70467590 70467865 + 0.306899554715732 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 9216 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-18 chr7 98698211 98698506 + 0.306899554715732 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 4570 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-6 chr11 94543622 94543896 + 0.306899554715732 NA intron (NM_001013381, intron 5 of 8) intron (NM_001013381, intron 5 of 8) 5448 NM_001013381 237926 Mm.342275 NM_001013381 ENSMUSG00000039096 Rsad1 B430319G23|BC056485 radical S-adenosyl methionine domain containing 1 protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-7 chr9 54863145 54863474 + 0.306899554715732 NA promoter-TSS (NM_022655) promoter-TSS (NM_022655) -446 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-22 chr8 111057938 111058145 + 0.306899554715732 NA TTS (NM_028274) TTS (NM_028274) 1702 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-3 chr10 12810036 12810387 + 0.306899554715732 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 51524 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-15 chr5 115531874 115532169 + 0.306899554715732 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 25345 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-8 chr15 98880832 98881184 + 0.306899554715732 NA intron (NM_026967, intron 1 of 7) intron (NM_026967, intron 1 of 7) 406 NM_026967 69159 Mm.259708 NM_026967 ENSMUSG00000023755 Rhebl1 1810036J22Rik|Rheb2 Ras homolog enriched in brain like 1 protein-coding common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-7 chr8 121991291 121991561 + 0.306899554715732 NA intron (NM_016812, intron 5 of 13) intron (NM_016812, intron 5 of 13) 13402 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-11 chr4 117252062 117252337 + 0.306899554715732 NA promoter-TSS (NM_029589) promoter-TSS (NM_029589) -141 NM_029589 68777 Mm.331805 NM_026837 ENSMUSG00000048772 Tmem53 1110038M16Rik|1500001P22Rik|1700012A05Rik transmembrane protein 53 protein-coding common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-5 chr4 117252037 117252318 + 0.306899554715732 NA promoter-TSS (NM_029589) promoter-TSS (NM_029589) -163 NM_029589 68777 Mm.331805 NM_026837 ENSMUSG00000048772 Tmem53 1110038M16Rik|1500001P22Rik|1700012A05Rik transmembrane protein 53 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-16 chr6 17488309 17488730 + 0.306899554715732 NA intron (NM_008591, intron 2 of 21) intron (NM_008591, intron 2 of 21) 24562 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732 chr1 73234735 73235082 + 0.306899554715732 NA Intergenic Intergenic -164060 NR_040605 78718 Mm.244075 NR_040605 ENSMUSG00000101812 D530049I02Rik - RIKEN cDNA D530049I02 gene ncRNA unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-2 chr10 16956812 16957280 + 0.306899554715732 NA intron (NR_038020, intron 6 of 8) intron (NR_038020, intron 6 of 8) 138736 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-6 chr5 65764037 65764312 + 0.306899554715732 NA intron (NM_001024917, intron 1 of 19) CpG 653 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-4 chr18 60649248 60649607 + 0.306899554715732 NA Intergenic Intergenic -13983 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-20 chr8 22858697 22859012 + 0.306899554715732 NA promoter-TSS (NM_001081149) promoter-TSS (NM_001081149) -685 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-2 chr1 135659017 135659306 + 0.306899554715732 NA Intergenic Intergenic -60902 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-3 chr11 59162931 59163245 + 0.306899554715732 NA intron (NM_001270791, intron 1 of 1) intron (NM_001270791, intron 1 of 1) 657 NM_001270791 216792 Mm.266175 NM_173785 ENSMUSG00000049287 Iba57 4930543L23Rik|A230051G13Rik|C1orf69 IBA57 homolog, iron-sulfur cluster assembly protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-14 chr5 8997310 8997620 + 0.306899554715732 NA promoter-TSS (NM_023733) promoter-TSS (NM_023733) -319 NM_023733 74114 Mm.28197 NM_023733 ENSMUSG00000003623 Crot 1200003H03Rik carnitine O-octanoyltransferase protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-4 chr17 5805678 5806052 + 0.306899554715732 NA Intergenic Intergenic 6375 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-12 chr4 139716054 139716404 + 0.306899554715732 NA Intergenic Intergenic 62691 NM_031873 83770 Mm.190612 NM_031873 ENSMUSG00000028738 Tas1r2 Gpr71|T1r2|TR2 taste receptor, type 1, member 2 protein-coding common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-8 chr8 122527933 122528202 + 0.306899554715732 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 23262 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-9 chr19 5731254 5731516 + 0.306899554715732 NA intron (NM_020491, intron 2 of 3) intron (NM_020491, intron 2 of 3) 347 NM_020491 56390 Mm.455818 NM_020491 ENSMUSG00000079478 Sssca1 1500016H19Rik|C184L Sjogren syndrome/scleroderma autoantigen 1 protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-5 chr17 13699122 13699420 + 0.306899554715732 NA Intergenic B1_Mus1|SINE|Alu -61270 NR_151731 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-4 chr11 8424511 8424829 + 0.306899554715732 NA Intergenic Intergenic 239865 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-23 chr8 121991295 121991581 + 0.306899554715732 NA intron (NM_016812, intron 5 of 13) intron (NM_016812, intron 5 of 13) 13414 NR_106096 102466915 NR_106096 ENSMUSG00000099140 Mir7237 Gm27482|mmu-mir-7237 microRNA 7237 ncRNA common_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732 chr1 58726176 58726401 + 0.306899554715732 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) -4264 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak1_22_18_0.00198076792591362_4.24891789740654_0.306899554715732-8 chr9 113930426 113930773 + 0.306899554715732 NA promoter-TSS (NM_001083319) promoter-TSS (NM_001083319) -335 NM_001083319 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak2_91_73_0.0263449565940608_6.22262584392598_0.306899018650293 chr1 135636443 135637631 + 0.306899018650293 NA Intergenic Intergenic 39261 NR_151586 215714 Mm.472859 NM_175447 Gm4793 EG215714 predicted gene 4793 ncRNA common_peak2_88_75_-0.059620287043658_6.21811736992176_0.306899018650293-2 chr2 114654429 114655145 + 0.306899018650293 NA intron (NM_025675, intron 1 of 8) CpG 177 NM_001356438 66632 Mm.117809 NM_025675 ENSMUSG00000057147 Dph6 5730421E18Rik|Atpbd4 diphthamine biosynthesis 6 protein-coding common_peak2_88_75_-0.059620287043658_6.21811736992176_0.306899018650293 chr11 96746982 96747653 + 0.306899018650293 NA intron (NM_001177898, intron 10 of 10) intron (NM_001177898, intron 10 of 10) 30238 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_91_73_0.0263449565940608_6.22262584392598_0.306899018650293-3 chr8 111747596 111748649 + 0.306899018650293 NA Intergenic Intergenic -4273 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_90_73_0.0106888788270485_6.21479780504247_0.306899018650293-2 chr3 79976405 79977741 + 0.306899018650293 NA Intergenic Intergenic 91143 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak1_91_73_0.0263449565940608_6.22262584392598_0.306899018650293 chr15 37960241 37960866 + 0.306899018650293 NA 5' UTR (NM_001357022, exon 1 of 9) 5' UTR (NM_001357022, exon 1 of 9) 303 NM_001357023 382985 Mm.24738 NM_199476 ENSMUSG00000022292 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding common_peak1_90_73_0.0106888788270485_6.21479780504247_0.306899018650293 chr12 52635439 52636917 + 0.306899018650293 NA Intergenic Intergenic -33856 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak1_90_73_0.0106888788270485_6.21479780504247_0.306899018650293-2 chr2 120976758 120977876 + 0.306899018650293 NA exon (NM_175285, exon 1 of 14) exon (NM_175285, exon 1 of 14) 255 NM_175285 96957 Mm.315212 NM_175285 ENSMUSG00000054484 Tmem62 B830009D23Rik|C77355 transmembrane protein 62 protein-coding common_peak1_91_73_0.0263449565940608_6.22262584392598_0.306899018650293-2 chr6 70813326 70814519 + 0.306899018650293 NA Intergenic Intergenic -21747 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_90_73_0.0106888788270485_6.21479780504247_0.306899018650293 chr12 73908161 73908927 + 0.306899018650293 NA intron (NM_010431, intron 1 of 14) CpG 677 NM_001313919 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_91_73_0.0263449565940608_6.22262584392598_0.306899018650293-2 chr11 88099353 88099914 + 0.306899018650293 NA non-coding (NR_045499, exon 4 of 4) non-coding (NR_045499, exon 4 of 4) 487 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_88_75_-0.059620287043658_6.21811736992176_0.306899018650293-2 chr7 99132184 99132993 + 0.306899018650293 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 8556 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_88_75_-0.059620287043658_6.21811736992176_0.306899018650293-3 chr8 123504125 123504621 + 0.306899018650293 NA TTS (NM_054070) TTS (NM_054070) 11082 NM_001170975 72185 Mm.27925 NM_028146 ENSMUSG00000031970 Dbndd1 2810427I04Rik|D8Ertd590e dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding common_peak1_88_75_-0.059620287043658_6.21811736992176_0.306899018650293 chr2 155691136 155692348 + 0.306899018650293 NA intron (NM_019828, intron 1 of 18) intron (NM_019828, intron 1 of 18) 642 NM_019828 56407 Mm.234944 NM_019828 ENSMUSG00000038324 Trpc4ap 4833429F06Rik|D2Ertd113e|Trrp4ap|mFLJ00177|truss transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding common_peak1_201_168_-0.0384365165980158_7.38166117798318_0.306898919404611 chr4 126255445 126257233 + 0.306898919404611 NA promoter-TSS (NM_144941) promoter-TSS (NM_144941) -20 NM_001145970 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_201_168_-0.0384365165980158_7.38166117798318_0.306898919404611 chr19 36925251 36926954 + 0.306898919404611 NA promoter-TSS (NM_001080706) promoter-TSS (NM_001080706) 23 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding common_peak2_92_74_0.0224664512843562_6.24005191613806_0.306820760341408 chr10 67726634 67727577 + 0.306820760341408 NA Intergenic Intergenic -155146 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak1_92_74_0.0224664512843562_6.24005191613806_0.306820760341408 chr2 144527482 144528214 + 0.306820760341408 NA promoter-TSS (NM_001360362) promoter-TSS (NM_001360362) 103 NM_029763 70408 Mm.389351 NM_029763 ENSMUSG00000027427 Polr3f 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6 polymerase (RNA) III (DNA directed) polypeptide F protein-coding common_peak2_92_74_0.0224664512843562_6.24005191613806_0.306820760341408-2 chr15 39111967 39112657 + 0.306820760341408 NA promoter-TSS (NM_198606) promoter-TSS (NM_198606) 404 NM_172402 69906 Mm.17875 NM_172402 ENSMUSG00000022299 Slc25a32 2610043O12Rik|Mftc solute carrier family 25, member 32 protein-coding common_peak2_92_74_0.0224664512843562_6.24005191613806_0.306820760341408-3 chr15 99125871 99126768 + 0.306820760341408 NA promoter-TSS (NM_139140) promoter-TSS (NM_139140) -526 NM_139140 72572 Mm.276650 NM_139140 ENSMUSG00000051934 Spats2 2700012F11Rik|59kDa|Scr59|p59 spermatogenesis associated, serine-rich 2 protein-coding common_peak1_93_75_0.0186788102852251_6.2572669185862_0.306744561642298-4 chr3 121617849 121618841 + 0.306744561642298 NA Intergenic Intergenic 25140 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_91_77_-0.0496038966392378_6.26060027054263_0.306744561642298 chr13 38037252 38037927 + 0.306744561642298 NA promoter-TSS (NM_027724) promoter-TSS (NM_027724) 600 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 protein-coding common_peak1_93_75_0.0186788102852251_6.2572669185862_0.306744561642298-3 chr2 180967329 180968289 + 0.306744561642298 NA 5' UTR (NM_001177706, exon 1 of 12) 5' UTR (NM_001177706, exon 1 of 12) 509 NM_001177706 228998 Mm.33765 NM_145760 ENSMUSG00000027575 Arfgap1 AI115377|Arf1gap ADP-ribosylation factor GTPase activating protein 1 protein-coding common_peak1_90_77_-0.0652599744062501_6.25277223165912_0.306744561642298-2 chr5 114371535 114372531 + 0.306744561642298 NA intron (NM_001159941, intron 2 of 6) intron (NM_001159941, intron 2 of 6) 8472 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak1_93_75_0.0186788102852251_6.2572669185862_0.306744561642298-6 chr8 22652841 22653869 + 0.306744561642298 NA promoter-TSS (NM_011130) promoter-TSS (NM_011130) 82 NM_011130 18970 Mm.123211 NM_011130 ENSMUSG00000031536 Polb A430088C08Rik polymerase (DNA directed), beta protein-coding common_peak2_93_75_0.0186788102852251_6.2572669185862_0.306744561642298 chr19 55099199 55100040 + 0.306744561642298 NA promoter-TSS (NM_008149) promoter-TSS (NM_008149) -142 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT-1|GPAT1|P90 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak1_93_75_0.0186788102852251_6.2572669185862_0.306744561642298-5 chr6 140621153 140621773 + 0.306744561642298 NA Intergenic Intergenic -1200 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_90_77_-0.0652599744062501_6.25277223165912_0.306744561642298 chr12 31265300 31266072 + 0.306744561642298 NA intron (NM_008482, intron 1 of 32) CpG 392 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak2_93_75_0.0186788102852251_6.2572669185862_0.306744561642298-2 chr4 135963202 135964325 + 0.306744561642298 NA promoter-TSS (NM_001356493) promoter-TSS (NM_001356493) 38 NM_001356493 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding common_peak2_90_77_-0.0652599744062501_6.25277223165912_0.306744561642298 chr2 34825762 34826771 + 0.306744561642298 NA promoter-TSS (NM_013890) promoter-TSS (NM_013890) -31 NM_001164772 30050 Mm.4465 NM_013890 ENSMUSG00000035949 Fbxw2 2700071L08Rik|FBW2|Fwd2|MD6 F-box and WD-40 domain protein 2 protein-coding common_peak2_90_77_-0.0652599744062501_6.25277223165912_0.306744561642298-2 chr2 163801290 163802165 + 0.306744561642298 NA Intergenic Intergenic -19107 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_93_75_0.0186788102852251_6.2572669185862_0.306744561642298 chr1 143702088 143703377 + 0.306744561642298 NA 5' UTR (NM_145991, exon 1 of 17) 5' UTR (NM_145991, exon 1 of 17) 161 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding common_peak1_93_75_0.0186788102852251_6.2572669185862_0.306744561642298-2 chr16 96091777 96092646 + 0.306744561642298 NA Intergenic Intergenic -9783 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak2_94_76_0.01497883303088_6.27427595721034_0.306670342299337-3 chr9 75195543 75196494 + 0.306670342299337 NA intron (NM_010864, intron 31 of 40) intron (NM_010864, intron 31 of 40) -35996 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding common_peak2_94_76_0.01497883303088_6.27427595721034_0.306670342299337-2 chr14 76786601 76787539 + 0.306670342299337 NA Intergenic Intergenic 26939 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_92_78_-0.0524956063968665_6.27753294497867_0.306670342299337 chr17 45772901 45774019 + 0.306670342299337 NA intron (NR_152153, intron 2 of 4) intron (NR_152153, intron 2 of 4) 38954 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak1_94_76_0.01497883303088_6.27427595721034_0.306670342299337-2 chr11 70647298 70648349 + 0.306670342299337 NA promoter-TSS (NM_024211) promoter-TSS (NM_024211) 536 NM_027445 70510 Mm.261818 NM_027445 ENSMUSG00000040746 Rnf167 0610010G05Rik|5730408C10Rik|AU019305|AV328608 ring finger protein 167 protein-coding common_peak1_94_76_0.01497883303088_6.27427595721034_0.306670342299337 chr10 116995160 116995806 + 0.306670342299337 NA intron (NM_001007583, intron 4 of 9) intron (NM_001007583, intron 4 of 9) 9169 NM_001007583 382427 Mm.339322 NM_001007583 ENSMUSG00000020169 Best3 Vmd2l3|mBest4 bestrophin 3 protein-coding common_peak2_94_76_0.01497883303088_6.27427595721034_0.306670342299337 chr10 99242431 99243409 + 0.306670342299337 NA Intergenic Intergenic -20311 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_94_76_0.01497883303088_6.27427595721034_0.306670342299337-3 chr14 76786599 76787520 + 0.306670342299337 NA Intergenic Intergenic 26928 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_210_175_-0.0345446644786609_7.44215928639797_0.306662126832118 chr7 112298323 112299710 + 0.306662126832118 NA intron (NM_001193305, intron 3 of 25) intron (NM_001193305, intron 3 of 25) -69292 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_211_176_-0.0359454539596262_7.44963282310318_0.306629850211599 chr1 106407297 106409649 + 0.306629850211599 NA Intergenic Intergenic 138158 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-22 chr7 98415211 98415470 + 0.306598483909156 NA Intergenic Intergenic -25076 NM_001130693 14918 Mm.389928 NM_001034890 ENSMUSG00000074003 Gucy2d - guanylate cyclase 2d protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-4 chr12 80271195 80271496 + 0.306598483909156 NA Intergenic L2|LINE|L2 -10964 NM_001346669 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-11 chr15 27821748 27821972 + 0.306598483909156 NA intron (NM_001081302, intron 30 of 56) intron (NM_001081302, intron 30 of 56) -140318 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-23 chr9 119937106 119937505 + 0.306598483909156 NA promoter-TSS (NM_028735) promoter-TSS (NM_028735) 253 NM_028976 74498 Mm.104789 NM_028976 ENSMUSG00000032513 Gorasp1 5430411C10Rik|GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-15 chr19 46623551 46623877 + 0.306598483909156 NA intron (NM_001177813, intron 1 of 3) intron (NM_001177813, intron 1 of 3) 313 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-9 chr19 34253268 34253531 + 0.306598483909156 NA intron (NM_007392, intron 1 of 8) intron (NM_007392, intron 1 of 8) 1974 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-16 chr2 137725051 137725345 + 0.306598483909156 NA Intergenic Intergenic -531386 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-7 chr12 75555375 75555742 + 0.306598483909156 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 40642 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-12 chr3 36480917 36481177 + 0.306598483909156 NA intron (NM_028183, intron 2 of 2) intron (NM_028183, intron 2 of 2) 5110 NM_028183 72282 Mm.55317 NM_028183 ENSMUSG00000027713 1810062G17Rik - RIKEN cDNA 1810062G17 gene protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-18 chr6 125349178 125349521 + 0.306598483909156 NA promoter-TSS (NM_011609) promoter-TSS (NM_011609) -374 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-12 chr15 66865966 66866288 + 0.306598483909156 NA Intergenic Intergenic -25266 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-9 chr14 25379317 25379526 + 0.306598483909156 NA Intergenic Intergenic -79764 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-14 chr4 63065261 63065576 + 0.306598483909156 NA intron (NM_028326, intron 2 of 14) intron (NM_028326, intron 2 of 14) 88754 NM_007443 11699 Mm.2197 NM_007443 ENSMUSG00000028356 Ambp AI194774|ASPI|HI-30|Intin4|Itil|UTI alpha 1 microglobulin/bikunin protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-7 chr14 73510106 73510423 + 0.306598483909156 NA intron (NM_026119, intron 1 of 6) CpG 215 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-20 chr7 18910112 18910348 + 0.306598483909156 NA 5' UTR (NM_001033314, exon 1 of 14) 5' UTR (NM_001033314, exon 1 of 14) 174 NM_001033314 232933 Mm.333624 NM_001033314 ENSMUSG00000074358 Ccdc61 C530028I08Rik|Gm159 coiled-coil domain containing 61 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156 chr1 92799335 92799634 + 0.306598483909156 NA Intergenic Intergenic -32161 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-10 chr2 76370467 76370964 + 0.306598483909156 NA intron (NM_153405, intron 1 of 9) intron (NM_153405, intron 1 of 9) 731 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding unique_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156 chr15 37608211 37608405 + 0.306598483909156 NA intron (NM_001359845, intron 2 of 6) intron (NM_001359845, intron 2 of 6) 72266 NM_001359840 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-13 chr3 87160381 87160665 + 0.306598483909156 NA intron (NM_001170985, intron 1 of 15) intron (NM_001170985, intron 1 of 15) 14224 NM_001170985 170643 Mm.89552 NM_130867 ENSMUSG00000041734 Kirrel 6720469N11Rik|Kirrel1|Neph1 kirre like nephrin family adhesion molecule 1 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-2 chr12 26469183 26469410 + 0.306598483909156 NA promoter-TSS (NM_020557) promoter-TSS (NM_020557) 81 NM_020557 22169 Mm.271839 NM_020557 ENSMUSG00000020638 Cmpk2 1200004E04Rik|TDKI|Tyki cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial protein-coding unique_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156 chr3 107830909 107831452 + 0.306598483909156 NA Intergenic Intergenic -46050 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding unique_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-2 chr7 90086504 90086937 + 0.306598483909156 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 42754 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-19 chr5 64201213 64201649 + 0.306598483909156 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) -28926 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-4 chr11 97811617 97812016 + 0.306598483909156 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 12251 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-20 chr8 72727710 72728234 + 0.306598483909156 NA intron (NM_001113248, intron 3 of 6) intron (NM_001113248, intron 3 of 6) 4702 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-3 chr10 24582462 24582802 + 0.306598483909156 NA Intergenic Intergenic -12810 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-10 chr15 5089296 5089783 + 0.306598483909156 NA Intergenic Intergenic 18994 NM_001163138 239319 Mm.31252 NM_001163138 ENSMUSG00000041849 Card6 D730008L15 caspase recruitment domain family, member 6 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-17 chr6 17496619 17497182 + 0.306598483909156 NA intron (NM_008591, intron 3 of 21) intron (NM_008591, intron 3 of 21) 32943 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-15 chr4 134287430 134287676 + 0.306598483909156 NA promoter-TSS (NM_001163794) promoter-TSS (NM_001163794) 293 NM_146156 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-5 chr12 111667543 111668120 + 0.306598483909156 NA Intergenic Intergenic 4507 NM_021273 12709 Mm.16831 NM_021273 ENSMUSG00000001270 Ckb B-CK|Bck|CPK-B|Ck-3|Ck3|Ckbb creatine kinase, brain protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-6 chr11 115699706 115700176 + 0.306598483909156 NA promoter-TSS (NM_001313937) promoter-TSS (NM_001313937) -13 NM_001313936 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-2 chr10 24471117 24471446 + 0.306598483909156 NA Intergenic Intergenic -124161 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-17 chr3 49756633 49756846 + 0.306598483909156 NA exon (NM_130448, exon 1 of 4) exon (NM_130448, exon 1 of 4) 577 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-6 chr13 32928486 32928787 + 0.306598483909156 NA Intergenic Intergenic -30496 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156 chr1 189786825 189787170 + 0.306598483909156 NA intron (NM_008976, intron 2 of 18) intron (NM_008976, intron 2 of 18) 58729 NM_008976 19250 Mm.4498 NM_008976 ENSMUSG00000026604 Ptpn14 C130080N23Rik|PTP36 protein tyrosine phosphatase, non-receptor type 14 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-3 chr12 76527950 76528471 + 0.306598483909156 NA Intergenic Intergenic 5002 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-5 chr11 110337163 110337581 + 0.306598483909156 NA intron (NM_147219, intron 1 of 38) CpG 344 NM_147219 217265 Mm.41942 NM_147219 ENSMUSG00000018800 Abca5 ABC13|B930033A02Rik|mKIAA1888 ATP-binding cassette, sub-family A (ABC1), member 5 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-13 chr19 12335631 12336054 + 0.306598483909156 NA intron (NR_030566, intron 3 of 3) intron (NR_030566, intron 3 of 3) -13017 NM_001011839 258117 Mm.432096 NM_001011839 ENSMUSG00000096436 Olfr1437 MOR214-6 olfactory receptor 1437 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-21 chr9 96861077 96861358 + 0.306598483909156 NA intron (NM_001289645, intron 1 of 6) intron (NM_001289645, intron 1 of 6) 28257 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-19 chr7 38228244 38228602 + 0.306598483909156 NA promoter-TSS (NM_024413) promoter-TSS (NM_024413) -429 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-8 chr18 38191804 38192323 + 0.306598483909156 NA Intergenic Intergenic 17699 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-21 chr7 38228265 38228628 + 0.306598483909156 NA promoter-TSS (NM_024413) promoter-TSS (NM_024413) -452 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-14 chr19 28298410 28298724 + 0.306598483909156 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -287401 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-8 chr13 40732194 40732402 + 0.306598483909156 NA intron (NM_001301674, intron 2 of 7) intron (NM_001301674, intron 2 of 7) 1525 NM_011547 21418 Mm.85544 NM_011547 ENSMUSG00000021359 Tfap2a AP-2|AP2alpha|Ap-2 (a)|Ap2|Ap2tf|Tcfap2a transcription factor AP-2, alpha protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-11 chr2 104096057 104096356 + 0.306598483909156 NA intron (NM_007652, intron 1 of 3) intron (NM_007652, intron 1 of 3) 405 NM_001111060 12509 Mm.247265 NM_007652 ENSMUSG00000032679 Cd59a AA987121|Cd59|protectin CD59a antigen protein-coding common_peak1_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-18 chr5 3321509 3322090 + 0.306598483909156 NA Intergenic B1F|SINE|Alu -22094 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_22_20_-0.142409141409262_4.32111285207413_0.306598483909156-16 chr5 92728618 92728994 + 0.306598483909156 NA intron (NM_015756, intron 1 of 10) intron (NM_015756, intron 1 of 10) 45371 NM_015756 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-14 chr3 151762630 151762972 + 0.306598483909153 NA promoter-TSS (NM_031367) promoter-TSS (NM_031367) 90 NM_031367 15061 Mm.219544 NM_031367 ENSMUSG00000039146 Ifi44l H-28|H28|H28-1|NS1178 interferon-induced protein 44 like protein-coding unique_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-4 chr4 141793858 141794200 + 0.306598483909153 NA intron (NM_001355176, intron 1 of 8) CpG 417 NM_001277932 12371 Mm.88829 NM_015733 ENSMUSG00000028914 Casp9 AI115399|APAF-3|AW493809|CASP-9|Caspase-9|ICE-LAP6|Mch6 caspase 9 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-9 chr18 60619253 60619707 + 0.306598483909153 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 4825 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-18 chr6 88963491 88963735 + 0.306598483909153 NA Intergenic Intergenic 61362 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-2 chr11 19920032 19920448 + 0.306598483909153 NA Intergenic CpG -4202 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-2 chr18 60606638 60607048 + 0.306598483909153 NA intron (NM_177340, intron 1 of 2) intron (NM_177340, intron 1 of 2) 3261 NM_001109975 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-13 chr19 27216513 27216838 + 0.306598483909153 NA promoter-TSS (NM_013703) promoter-TSS (NM_013703) 191 NM_001347441 22359 Mm.4141 NM_013703 ENSMUSG00000024924 Vldlr AA408956|AI451093|AW047288 very low density lipoprotein receptor protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-20 chr9 37806392 37806805 + 0.306598483909153 NA Intergenic Intergenic 2709 NM_146883 258883 Mm.377734 NM_146883 ENSMUSG00000066750 Olfr876 MOR161-1 olfactory receptor 876 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-19 chr6 121086340 121086582 + 0.306598483909153 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -4834 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-8 chr9 123503604 123503966 + 0.306598483909153 NA intron (NM_013860, intron 2 of 7) intron (NM_013860, intron 2 of 7) 25084 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-17 chr6 118138829 118139059 + 0.306598483909153 NA promoter-TSS (NM_001362149) promoter-TSS (NM_001362149) -114 NM_001362149 78752 Mm.300317 NM_030165 ENSMUSG00000042042 Csgalnact2 4632415D10Rik|Galnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-10 chr17 22866891 22867152 + 0.306598483909153 NA 5' UTR (NM_001110254, exon 1 of 5) 5' UTR (NM_001110254, exon 1 of 5) 113 NM_177358 240041 Mm.328828 NM_177358 ENSMUSG00000059142 Zfp945 A630033E08Rik|C730040L01Rik zinc finger protein 945 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-19 chr9 25244266 25244610 + 0.306598483909153 NA Intergenic Intergenic -7553 NM_001359736 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-2 chr1 175692098 175692534 + 0.306598483909153 NA exon (NM_010098, exon 1 of 4) exon (NM_010098, exon 1 of 4) 316 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-14 chr2 10048261 10048551 + 0.306598483909153 NA 5' UTR (NM_027748, exon 1 of 7) 5' UTR (NM_027748, exon 1 of 7) 203 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-25 chr9 56370475 56370779 + 0.306598483909153 NA intron (NM_172924, intron 2 of 6) intron (NM_172924, intron 2 of 6) 47423 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153 chr10 24492880 24493363 + 0.306598483909153 NA Intergenic Intergenic -102321 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-16 chr5 113592469 113592724 + 0.306598483909153 NA Intergenic Intergenic 42176 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-3 chr13 91461986 91462233 + 0.306598483909153 NA intron (NM_001360776, intron 1 of 15) CpG 1012 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-22 chr8 34288366 34288580 + 0.306598483909153 NA Intergenic Intergenic -121761 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-11 chr17 72965380 72965726 + 0.306598483909153 NA Intergenic Intergenic 47248 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-4 chr2 25986981 25987222 + 0.306598483909153 NA Intergenic Intergenic -3819 NM_001276361 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-15 chr3 153911676 153912065 + 0.306598483909153 NA promoter-TSS (NR_028097) promoter-TSS (NR_028097) 319 NR_028525 100217425 NR_028525 Snord45c MBII-401 small nucleolar RNA, C/D box 45C snoRNA unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-6 chr8 70504146 70504512 + 0.306598483909153 NA TTS (NM_025577) TTS (NM_025577) 2097 NR_151646 66462 Mm.28242 NM_025577 ENSMUSG00000058833 Rex1bd 2810428I15Rik required for excision 1-B domain containing protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-8 chr15 100402501 100402974 + 0.306598483909153 NA intron (NM_008732, intron 10 of 16) intron (NM_008732, intron 10 of 16) 20318 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-24 chr9 14234123 14234643 + 0.306598483909153 NA Intergenic Intergenic -41918 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-15 chr2 26648459 26648746 + 0.306598483909153 NA Intergenic Intergenic -8358 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-3 chr11 98357826 98358162 + 0.306598483909153 NA promoter-TSS (NM_021547) promoter-TSS (NM_021547) 289 NR_045477 69338 Mm.398308 NR_045477 ENSMUSG00000085944 1700003D09Rik - RIKEN cDNA 1700003D09 gene ncRNA unique_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-2 chr2 30440131 30440614 + 0.306598483909153 NA intron (NM_138748, intron 8 of 9) intron (NM_138748, intron 8 of 9) 24322 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-21 chr7 118488442 118488791 + 0.306598483909153 NA 3' UTR (NM_001033380, exon 1 of 1) 3' UTR (NM_001033380, exon 1 of 1) 3359 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-12 chr18 36399467 36399742 + 0.306598483909153 NA Intergenic Intergenic 50980 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-6 chr7 130289424 130289788 + 0.306598483909153 NA Intergenic Intergenic -22798 NM_201601 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-10 chr19 53434278 53434571 + 0.306598483909153 NA Intergenic Intergenic 30372 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758 myocardial infarction associated transcript 1 ncRNA unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-9 chrX 20848687 20849168 + 0.306598483909153 NA intron (NM_001159645, intron 1 of 5) intron (NM_001159645, intron 1 of 5) 384 NM_001159645 11836 Mm.220946 NM_009703 ENSMUSG00000001127 Araf 1200013E08Rik|A-Raf|AW495444|Araf1 Araf proto-oncogene, serine/threonine kinase protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-9 chr16 86142161 86142610 + 0.306598483909153 NA Intergenic Intergenic -241260 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-16 chr4 116824425 116824842 + 0.306598483909153 NA Intergenic Intergenic -3125 NM_146256 242642 Mm.279897 NM_146256 ENSMUSG00000043155 Hpdl A830048M07Rik|BC034099|Gloxd1 4-hydroxyphenylpyruvate dioxygenase-like protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-23 chr8 36898654 36898967 + 0.306598483909153 NA intron (NM_001194940, intron 2 of 17) B4A|SINE|B4 53632 NM_001194940 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-18 chr7 25831581 25831855 + 0.306598483909153 NA Intergenic Intergenic -15188 NM_028775 74134 Mm.275188 NM_028775 ENSMUSG00000040703 Cyp2s1 1200011C15Rik|AU041727|C79779 cytochrome P450, family 2, subfamily s, polypeptide 1 protein-coding unique_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-5 chr7 84029465 84029823 + 0.306598483909153 NA intron (NM_030728, intron 1 of 28) intron (NM_030728, intron 1 of 28) 56861 NM_030728 80982 Mm.160389 NM_030728 ENSMUSG00000052353 Cemip 12H19.01.T7|6330404C01Rik|9930013L23Rik|AY007814|Kiaa1199 cell migration inducing protein, hyaluronan binding protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-11 chr2 144556346 144556640 + 0.306598483909153 NA 5' UTR (NM_001355379, exon 1 of 20) 5' UTR (NM_001355379, exon 1 of 20) 264 NM_001355380 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding unique_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-3 chr4 141723625 141724029 + 0.306598483909153 NA promoter-TSS (NM_001017966) promoter-TSS (NM_001017966) -408 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-13 chr2 160731286 160731519 + 0.306598483909153 NA promoter-TSS (NM_021280) promoter-TSS (NM_021280) 92 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-5 chr15 64313927 64314215 + 0.306598483909153 NA intron (NM_001276461, intron 2 of 28) intron (NM_001276461, intron 2 of 28) -1398 NM_001276463 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-3 chr19 24225164 24225629 + 0.306598483909153 NA promoter-TSS (NM_001360392) promoter-TSS (NM_001360392) -268 NM_001360392 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding unique_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153 chr13 36532169 36532471 + 0.306598483909153 NA intron (NM_001039189, intron 5 of 5) intron (NM_001039189, intron 5 of 5) 202157 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-6 chr14 55591875 55592164 + 0.306598483909153 NA promoter-TSS (NM_011190) promoter-TSS (NM_011190) 277 NM_194346 268749 Mm.23748 NM_194346 ENSMUSG00000047098 Rnf31 AL033293|BC031509|Flj10111|HOIP|Paul|mFLJ00217 ring finger protein 31 protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-7 chr9 44378886 44379198 + 0.306598483909153 NA promoter-TSS (NM_021395) promoter-TSS (NM_021395) -448 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-7 chr14 76882598 76883029 + 0.306598483909153 NA Intergenic Intergenic 122682 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-6 chr15 95824560 95824854 + 0.306598483909153 NA non-coding (NR_155276, exon 2 of 2) non-coding (NR_155276, exon 2 of 2) 5365 NR_155277 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-20 chr6 145905949 145906157 + 0.306598483909153 NA Intergenic Intergenic -25820 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-17 chr5 135794897 135795227 + 0.306598483909153 NA Intergenic Intergenic 16413 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-8 chr17 30612038 30612280 + 0.306598483909153 NA intron (NM_001113560, intron 1 of 6) intron (NM_001113560, intron 1 of 6) 500 NM_025374 109801 Mm.261984 NM_025374 ENSMUSG00000024026 Glo1 0610009E22Rik|1110008E19Rik|2510049H23Rik|AW550643|GLY1|Glo-1|Glo-1r|Glo-1s|Glo1-r|Glo1-s|Qglo glyoxalase 1 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-5 chr14 31435471 31436047 + 0.306598483909153 NA intron (NM_011894, intron 1 of 8) CpG 341 NM_011894 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153 chr1 172126872 172127130 + 0.306598483909153 NA intron (NM_001159525, intron 1 of 5) intron (NM_001159525, intron 1 of 5) 246 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-4 chr11 115843079 115843432 + 0.306598483909153 NA intron (NM_001252532, intron 2 of 25) intron (NM_001252532, intron 2 of 25) 19197 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-5 chr2 117544146 117544566 + 0.306598483909153 NA Intergenic Intergenic -201479 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-4 chr14 24232389 24232636 + 0.306598483909153 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 13408 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding unique_peak1_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153 chr10 81142638 81143067 + 0.306598483909153 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 6581 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-12 chr2 156737252 156737621 + 0.306598483909153 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 16157 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 DLG associated protein 4 protein-coding common_peak2_23_19_-0.0110524484421131_4.31640187066631_0.306598483909153-7 chr17 15705589 15705818 + 0.306598483909153 NA intron (NM_007690, intron 1 of 35) CpG 736 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak2_93_79_-0.0553217711585523_6.29426720930809_0.306598026174992 chr11 54866430 54867078 + 0.306598026174992 NA intron (NM_008248, intron 1 of 2) CpG 371 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak1_93_79_-0.0553217711585523_6.29426720930809_0.306598026174992 chr8 70658792 70659601 + 0.306598026174992 NA intron (NM_023217, intron 1 of 4) intron (NM_023217, intron 1 of 4) 542 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_96_77_0.0262083355488292_6.29850638663666_0.306598026174992 chr15 83463609 83464437 + 0.306598026174992 NA intron (NM_001358643, intron 1 of 9) intron (NM_001358643, intron 1 of 9) 583 NM_001358641 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_95_77_0.0113634684365138_6.29108395308051_0.306598026174992 chr3 66290826 66292349 + 0.306598026174992 NA intron (NM_145820, intron 1 of 13) intron (NM_145820, intron 1 of 13) 5250 NM_145820 72789 Mm.443526 NM_028357 ENSMUSG00000027831 Veph1 2810471M23Rik|Veph ventricular zone expressed PH domain-containing 1 protein-coding common_peak1_217_174_0.0204287937228722_7.46142550869376_0.306597941429284 chr8 111742983 111744798 + 0.306597941429284 NA promoter-TSS (NM_009954) promoter-TSS (NM_009954) -41 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_218_175_0.0187644395828395_7.46881383842872_0.30656639423259 chr19 29250850 29252885 + 0.30656639423259 NA promoter-TSS (NM_008413) promoter-TSS (NM_008413) 64 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_94_80_-0.0580846291588433_6.3108076883052_0.306527540987196 chr10 59908047 59908767 + 0.306527540987196 NA Intergenic Intergenic 28816 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_97_78_0.0225224156157076_6.31504195598496_0.306527540987196-2 chr4 48472497 48473393 + 0.306527540987196 NA intron (NM_172304, intron 1 of 15) CpG 518 NM_172304 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak1_97_78_0.0225224156157076_6.31504195598496_0.306527540987196 chr10 4108205 4108986 + 0.306527540987196 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 104525 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak1_94_80_-0.0580846291588433_6.3108076883052_0.306527540987196-2 chr15 44619238 44619968 + 0.306527540987196 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) -38 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak2_97_78_0.0225224156157076_6.31504195598496_0.306527540987196 chr6 112244681 112245734 + 0.306527540987196 NA Intergenic Intergenic -28551 NM_144799 30937 Mm.234441 NM_144799 ENSMUSG00000057604 Lmcd1 AW455500|AW553074|dyxin LIM and cysteine-rich domains 1 protein-coding common_peak2_94_80_-0.0580846291588433_6.3108076883052_0.306527540987196 chr13 5845454 5846393 + 0.306527540987196 NA Intergenic Intergenic 12169 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_217_180_-0.0282059815280045_7.4857428963192_0.306504360287252 chr6 140622752 140625111 + 0.306504360287252 NA promoter-TSS (NM_001309437) promoter-TSS (NM_001309437) 429 NM_009637 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_390_321_-0.0223827223461956_8.31972551694152_0.306475730173541 chr16 55531361 55535252 + 0.306475730173541 NA Intergenic Intergenic 38575 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_95_81_-0.0607863173193213_6.32715884595842_0.306458818068574-2 chr17 34024427 34025392 + 0.306458818068574 NA promoter-TSS (NM_009066) promoter-TSS (NM_009066) -103 NR_106154 102466848 NR_106154 ENSMUSG00000105964 Mir219c mmu-mir-219c microRNA 219c ncRNA common_peak2_95_81_-0.0607863173193213_6.32715884595842_0.306458818068574 chr9 102766767 102767766 + 0.306458818068574 NA Intergenic Intergenic 27618 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak1_96_81_-0.0459414502070059_6.33458127951458_0.306458818068574-2 chr2 125858295 125859025 + 0.306458818068574 NA promoter-TSS (NM_175154) promoter-TSS (NM_175154) 422 NM_009939 12848 Mm.3596 NM_009939 ENSMUSG00000027206 Cops2 AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15 COP9 signalosome subunit 2 protein-coding common_peak1_95_81_-0.0607863173193213_6.32715884595842_0.306458818068574 chr15 59373910 59375168 + 0.306458818068574 NA promoter-TSS (NM_153548) promoter-TSS (NM_153548) 341 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak2_98_79_0.018918512164606_6.33138735096967_0.306458818068574 chr12 112673324 112674069 + 0.306458818068574 NA intron (NM_001331107, intron 1 of 13) CpG 580 NM_001165894 11651 Mm.6645 NM_009652 ENSMUSG00000001729 Akt1 Akt|LTR-akt|PKB|PKB/Akt|PKBalpha|Rac thymoma viral proto-oncogene 1 protein-coding common_peak1_96_81_-0.0459414502070059_6.33458127951458_0.306458818068574 chr18 67641132 67642094 + 0.306458818068574 NA promoter-TSS (NM_134138) promoter-TSS (NM_134138) 14 NM_134138 107047 Mm.150701 NM_134138 ENSMUSG00000024537 Psmg2 1700017I17Rik|AW545363|Clast3|Tnfsf5ip1 proteasome (prosome, macropain) assembly chaperone 2 protein-coding common_peak2_98_79_0.018918512164606_6.33138735096967_0.306458818068574-2 chr4 133632548 133633233 + 0.306458818068574 NA intron (NM_001017968, intron 1 of 7) intron (NM_001017968, intron 1 of 7) 539 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_96_81_-0.0459414502070059_6.33458127951458_0.306458818068574-3 chr8 64615769 64616684 + 0.306458818068574 NA intron (NM_013494, intron 3 of 8) intron (NM_013494, intron 3 of 8) 76883 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_219_182_-0.0309774960795917_7.50021109024425_0.306443701103146 chr7 139265897 139268317 + 0.306443701103146 NA 3' UTR (NM_001033206, exon 3 of 3) 3' UTR (NM_001033206, exon 3 of 3) 18625 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_223_179_0.0186810587425175_7.50119362570093_0.306443701103097 chr10 120977865 120979946 + 0.306443701103097 NA exon (NM_001081193, exon 1 of 13) exon (NM_001081193, exon 1 of 13) 425 NM_001081193 380664 Mm.339371 NM_001081193 ENSMUSG00000048661 Lemd3 AI316861|Man1 LEM domain containing 3 protein-coding common_peak2_222_179_0.012271576654542_7.49798888465695_0.306443701103097 chr19 7205263 7207193 + 0.306443701103097 NA promoter-TSS (NM_134150) promoter-TSS (NM_134150) 56 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding common_peak2_399_320_0.0147044363102733_8.33378170527744_0.306424992861114 chr19 41262571 41264679 + 0.306424992861114 NA intron (NM_133352, intron 1 of 14) CpG 379 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak2_97_82_-0.0487362675541139_6.35067129756987_0.306391792142995 chr18 11657171 11658089 + 0.306391792142995 NA non-coding (NR_045526, exon 1 of 18) non-coding (NR_045526, exon 1 of 18) 281 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8, endonuclease protein-coding common_peak1_223_185_-0.0286246560358387_7.52484648309011_0.306355191669352 chr8 32007078 32009485 + 0.306355191669352 NA Intergenic Intergenic -90078 NM_178591 211323 Mm.153432 NM_178591 ENSMUSG00000062991 Nrg1 6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF neuregulin 1 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-15 chr5 125265219 125265513 + 0.306326795069978 NA Intergenic Intergenic 75728 NM_016741 20778 Mm.282242 NM_016741 ENSMUSG00000037936 Scarb1 AI120173|CD36|Cd36l1|Chohd1|Cla-1|Cla1|D5Ertd460e|Hdlq1|Hlb398|SR-B1|SR-BI|SRBI|Srb1|mSR-BI scavenger receptor class B, member 1 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-12 chr4 117019515 117019978 + 0.306326795069978 NA intron (NM_001111277, intron 1 of 11) MIR3|SINE|MIR 344 NM_001111277 108067 Mm.34612 NM_175135 ENSMUSG00000028683 Eif2b3 1190002P15Rik eukaryotic translation initiation factor 2B, subunit 3 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-4 chr10 30600177 30600629 + 0.306326795069978 NA intron (NM_001358806, intron 1 of 10) CpG 297 NM_028604 73681 Mm.294503 NM_028604 ENSMUSG00000019792 Trmt11 2410075D05Rik|3110045I18Rik|AW213713 tRNA methyltransferase 11 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-5 chr15 78531683 78531976 + 0.306326795069978 NA Intergenic Intergenic -2178 NM_028331 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-7 chr13 48878322 48878580 + 0.306326795069978 NA TTS (NM_001033268) TTS (NM_001033268) -7566 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-8 chr16 33062555 33062858 + 0.306326795069978 NA exon (NM_172823, exon 1 of 17) exon (NM_172823, exon 1 of 17) 185 NM_172823 239833 Mm.131951 NM_172823 ENSMUSG00000022802 Lmln 5330415H22Rik|AI465495 leishmanolysin-like (metallopeptidase M8 family) protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-15 chr8 108907444 108907854 + 0.306326795069978 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -29211 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-8 chr18 50096246 50096608 + 0.306326795069978 NA Intergenic Intergenic -31774 NM_008292 15488 Mm.277857 NM_008292 ENSMUSG00000024507 Hsd17b4 17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2 hydroxysteroid (17-beta) dehydrogenase 4 protein-coding unique_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978 chr5 3596370 3596572 + 0.306326795069978 NA promoter-TSS (NM_172991) promoter-TSS (NM_172991) 76 NM_172991 269623 Mm.38014 NM_172991 ENSMUSG00000040302 Rbm48 AW548102|C030048B08Rik RNA binding motif protein 48 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-9 chr2 164912045 164912310 + 0.306326795069978 NA promoter-TSS (NM_199027) promoter-TSS (NM_199027) -427 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-10 chr19 8705053 8705242 + 0.306326795069978 NA Intergenic L3|LINE|CR1 8750 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-4 chr13 48878329 48878591 + 0.306326795069978 NA TTS (NM_001033268) TTS (NM_001033268) -7575 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978 chr1 75495436 75495891 + 0.306326795069978 NA TTS (NM_001310679) TTS (NM_001310679) 10789 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-3 chr13 15537603 15537919 + 0.306326795069978 NA intron (NM_008130, intron 2 of 14) intron (NM_008130, intron 2 of 14) 74038 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-18 chr8 22687960 22688336 + 0.306326795069978 NA intron (NM_001159774, intron 5 of 21) intron (NM_001159774, intron 5 of 21) 18435 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-6 chr13 43398385 43398600 + 0.306326795069978 NA exon (NM_023554, exon 1 of 8) exon (NM_023554, exon 1 of 8) 116 NM_023554 70078 Mm.439927 NM_023554 ENSMUSG00000063200 Nol7 2210008F15Rik|5730556I21Rik|NOP27|RARG-1 nucleolar protein 7 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-10 chr3 100162113 100162339 + 0.306326795069978 NA promoter-TSS (NM_010269) promoter-TSS (NM_010269) 181 NM_175552 269470 Mm.24591 NM_175552 ENSMUSG00000033285 Wdr3 AW546279|D030020G18Rik WD repeat domain 3 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-10 chr4 143212786 143212991 + 0.306326795069978 NA promoter-TSS (NM_001081355) promoter-TSS (NM_001081355) -179 NM_001256380 110593 Mm.332020 NM_001081355 ENSMUSG00000057637 Prdm2 4833427P12Rik|E330024L24Rik|Gm1033|Gm19732|KMT8|Riz|Riz1|Znfpr1c1 PR domain containing 2, with ZNF domain protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-11 chr2 127331803 127332380 + 0.306326795069978 NA Intergenic Intergenic -4068 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-9 chr17 46873503 46873987 + 0.306326795069978 NA Intergenic Intergenic -16876 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-8 chr15 95838509 95838882 + 0.306326795069978 NA intron (NM_001253813, intron 2 of 20) intron (NM_001253813, intron 2 of 20) -8623 NR_155276 102634389 Mm.440563 NR_155276 ENSMUSG00000078648 LOC102634389 - uncharacterized LOC102634389 ncRNA common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-5 chr13 24802198 24802439 + 0.306326795069978 NA 5' UTR (NM_024473, exon 1 of 5) 5' UTR (NM_024473, exon 1 of 5) 661 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-15 chr8 95080393 95080624 + 0.306326795069978 NA promoter-TSS (NM_028805) promoter-TSS (NM_028805) -693 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-17 chr6 121045702 121045990 + 0.306326795069978 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -18618 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-9 chr2 27539873 27540174 + 0.306326795069978 NA Intergenic Intergenic 24876 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-16 chr9 83834198 83834519 + 0.306326795069978 NA promoter-TSS (NM_009445) promoter-TSS (NM_009445) -331 NM_009445 22137 Mm.1904 NM_009445 ENSMUSG00000038379 Ttk AL022661|Esk1|Mps1|PYT|esk Ttk protein kinase protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-6 chr13 32928583 32928819 + 0.306326795069978 NA Intergenic Intergenic -30561 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-3 chr4 129999674 130000039 + 0.306326795069978 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 7802 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-2 chr11 60308371 60308712 + 0.306326795069978 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 44364 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-11 chr5 31153686 31154073 + 0.306326795069978 NA intron (NM_001310528, intron 1 of 7) intron (NM_001310528, intron 1 of 7) 301 NM_001294324 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-14 chr8 27234969 27235245 + 0.306326795069978 NA Intergenic Intergenic -5519 NM_013462 11556 Mm.278475 NM_013462 ENSMUSG00000031489 Adrb3 Adrb-3 adrenergic receptor, beta 3 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-3 chr1 158605830 158606123 + 0.306326795069978 NA intron (NM_007495, intron 14 of 22) intron (NM_007495, intron 14 of 22) 100351 NR_030441 735253 NR_030441 ENSMUSG00000070103 Mir488 Mirn488|mir-488|mmu-mir-488 microRNA 488 ncRNA common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-12 chr6 145905895 145906187 + 0.306326795069978 NA Intergenic Intergenic -25832 NM_001310837 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978 chr11 52098157 52098505 + 0.306326795069978 NA promoter-TSS (NM_019411) promoter-TSS (NM_019411) -493 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-3 chr1 139421905 139422167 + 0.306326795069978 NA promoter-TSS (NM_172643) promoter-TSS (NM_172643) -347 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-6 chr6 108666001 108666339 + 0.306326795069978 NA 3' UTR (NM_011498, exon 5 of 5) 3' UTR (NM_011498, exon 5 of 5) -5236 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-12 chr3 151762500 151762867 + 0.306326795069978 NA intron (NM_031367, intron 1 of 4) intron (NM_031367, intron 1 of 4) 208 NM_031367 15061 Mm.219544 NM_031367 ENSMUSG00000039146 Ifi44l H-28|H28|H28-1|NS1178 interferon-induced protein 44 like protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-17 chr9 4309112 4309431 + 0.306326795069978 NA promoter-TSS (NM_026962) promoter-TSS (NM_026962) 223 NM_026276 67618 Mm.33970 NM_026276 ENSMUSG00000025894 Aasdhppt 2010309J24Rik|2810407B07Rik|AASD-PPT|CGI-80|LYS2|LYS5 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-8 chr14 66103508 66103855 + 0.306326795069978 NA intron (NM_007940, intron 6 of 18) intron (NM_007940, intron 6 of 18) 6979 NM_001271421 13850 Mm.15295 NM_007940 ENSMUSG00000022040 Ephx2 CEH|Eph2|SEH|sEP epoxide hydrolase 2, cytoplasmic protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-13 chr6 115270240 115270691 + 0.306326795069978 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -18260 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978 chr11 97451328 97451707 + 0.306326795069978 NA 5' UTR (NM_021493, exon 2 of 19) 5' UTR (NM_021493, exon 2 of 19) 1357 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-16 chr8 119558973 119559387 + 0.306326795069978 NA promoter-TSS (NM_019709) promoter-TSS (NM_019709) -419 NM_019709 56453 Mm.206934 NM_019709 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 protein-coding unique_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-3 chr17 84364563 84365009 + 0.306326795069978 NA intron (NM_183021, intron 26 of 37) intron (NM_183021, intron 26 of 37) 101422 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-11 chr3 132799437 132800003 + 0.306326795069978 NA intron (NM_001163455, intron 23 of 25) RMER1A|Other|Other 78876 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-6 chr13 104177936 104178235 + 0.306326795069978 NA promoter-TSS (NM_001361539) promoter-TSS (NM_001361539) 381 NM_025879 66975 Mm.272541 NM_025879 ENSMUSG00000021711 Trappc13 2410002O22Rik|2610524F24Rik|AI451892|AU017229 trafficking protein particle complex 13 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-2 chr1 156066575 156066815 + 0.306326795069978 NA 3' UTR (NM_001358627, exon 6 of 6) 3' UTR (NM_001358627, exon 6 of 6) 25834 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-5 chr6 88942608 88942945 + 0.306326795069978 NA Intergenic Intergenic 40525 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-5 chr11 43927605 43928072 + 0.306326795069978 NA Intergenic Intergenic -26601 NM_001284381 11548 Mm.39086 NM_007416 ENSMUSG00000050541 Adra1b [a]1b adrenergic receptor, alpha 1b protein-coding unique_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-4 chr9 50659726 50660050 + 0.306326795069978 NA promoter-TSS (NM_145614) promoter-TSS (NM_145614) -108 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-19 chr9 21167130 21167672 + 0.306326795069978 NA intron (NM_183408, intron 1 of 14) intron (NM_183408, intron 1 of 14) 1687 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978 chr1 81760582 81760970 + 0.306326795069978 NA Intergenic Intergenic -371140 NR_105762 102466629 NR_105762 ENSMUSG00000098797 Mir6344 Gm27840|mmu-mir-6344 microRNA 6344 ncRNA common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-13 chr7 66373474 66373691 + 0.306326795069978 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 8142 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-13 chr6 142365794 142366256 + 0.306326795069978 NA intron (NM_001355511, intron 11 of 14) intron (NM_001355511, intron 11 of 14) 20328 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-7 chr17 49474889 49475255 + 0.306326795069978 NA intron (NM_001008231, intron 15 of 25) intron (NM_001008231, intron 15 of 25) 46708 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-4 chr2 119547300 119547504 + 0.306326795069978 NA promoter-TSS (NM_019769) promoter-TSS (NM_019769) 225 NM_172857 241624 Mm.212773 NM_172857 ENSMUSG00000048647 Exd1 4932702D22Rik|Exdl1|mExd1 exonuclease 3'-5' domain containing 1 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-14 chr5 115238094 115238416 + 0.306326795069978 NA exon (NM_026398, exon 3 of 6) exon (NM_026398, exon 3 of 6) 2404 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-14 chr7 90341726 90341933 + 0.306326795069978 NA intron (NM_001040085, intron 1 of 18) intron (NM_001040085, intron 1 of 18) 39474 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-14 chr7 98415219 98415490 + 0.306326795069978 NA Intergenic Intergenic -25062 NM_001130693 14918 Mm.389928 NM_001034890 ENSMUSG00000074003 Gucy2d - guanylate cyclase 2d protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-5 chr10 88501871 88502110 + 0.306326795069978 NA intron (NM_144807, intron 1 of 7) intron (NM_144807, intron 1 of 7) 1980 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding unique_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978 chr1 40400176 40400588 + 0.306326795069978 NA Intergenic Intergenic -29188 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-18 chr9 101073227 101073615 + 0.306326795069978 NA Intergenic Intergenic -1341 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 MSL complex subunit 2 protein-coding unique_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-2 chr13 49215605 49216006 + 0.306326795069978 NA intron (NM_026738, intron 1 of 5) CpG 221 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-4 chr10 121474734 121475317 + 0.306326795069978 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 1225 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-6 chr16 92616940 92617241 + 0.306326795069978 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 80239 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-2 chr1 86471170 86471420 + 0.306326795069978 NA Intergenic Intergenic 44966 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-15 chr7 114132741 114133018 + 0.306326795069978 NA Intergenic Intergenic -15098 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-3 chr15 103305559 103305819 + 0.306326795069978 NA Intergenic Intergenic 4749 NM_030720 80910 Mm.160369 NM_030720 ENSMUSG00000063234 Gpr84 EX33 G protein-coupled receptor 84 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-4 chr12 75555412 75555767 + 0.306326795069978 NA intron (NM_012024, intron 2 of 13) intron (NM_012024, intron 2 of 13) 40611 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding unique_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978 chr10 60379882 60380300 + 0.306326795069978 NA intron (NM_001252635, intron 33 of 68) intron (NM_001252635, intron 33 of 68) -19635 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-13 chr5 74195376 74195620 + 0.306326795069978 NA exon (NM_026878, exon 1 of 4) exon (NM_026878, exon 1 of 4) 172 NM_026878 68939 Mm.293316 NM_026878 ENSMUSG00000049907 Rasl11b 1190017B18Rik RAS-like, family 11, member B protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-7 chr8 64544626 64544959 + 0.306326795069978 NA Intergenic Intergenic -30351 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-11 chr5 111205276 111205596 + 0.306326795069978 NA intron (NM_001267622, intron 6 of 22) intron (NM_001267622, intron 6 of 22) -125261 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-7 chr14 121824967 121825367 + 0.306326795069978 NA Intergenic Intergenic -27433 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-12 chr6 125494437 125494740 + 0.306326795069978 NA exon (NM_007657, exon 1 of 8) exon (NM_007657, exon 1 of 8) 172 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-3 chr10 43480139 43480385 + 0.306326795069978 NA intron (NM_199028, intron 1 of 3) intron (NM_199028, intron 1 of 3) 1122 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-10 chr2 35477653 35478040 + 0.306326795069978 NA Intergenic Intergenic -16397 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-16 chr6 31102717 31103081 + 0.306326795069978 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -39806 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-17 chrX 159808912 159809247 + 0.306326795069978 NA intron (NM_021389, intron 3 of 16) intron (NM_021389, intron 3 of 16) -31389 NM_001135728 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_25_20_0.0332207516763523_4.40892779861694_0.306326795069978 chr1 20414338 20414699 + 0.306326795069978 NA intron (NM_153179, intron 36 of 66) intron (NM_153179, intron 36 of 66) 58064 NR_045734 75028 Mm.417820 NR_045734 ENSMUSG00000089914 4930486I03Rik - RIKEN cDNA 4930486I03 gene ncRNA unique_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-2 chr2 32422739 32423261 + 0.306326795069978 NA intron (NM_146118, intron 1 of 10) PB1D7|SINE|Alu 1066 NM_001290558 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_25_20_0.0332207516763523_4.40892779861694_0.306326795069978-7 chr16 11323083 11323624 + 0.306326795069978 NA intron (NM_028964, intron 1 of 20) intron (NM_028964, intron 1 of 20) 449 NM_028964 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-2 chr14 70324710 70325119 + 0.306326795069978 NA intron (NM_144808, intron 2 of 9) intron (NM_144808, intron 2 of 9) 23519 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-2 chr1 131525678 131526026 + 0.306326795069978 NA intron (NM_001081011, intron 1 of 22) CpG 1509 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak1_24_20_-0.0229635810532089_4.38083563225216_0.306326795069978-9 chr18 60916220 60916744 + 0.306326795069978 NA exon (NM_001038499, exon 2 of 2) exon (NM_001038499, exon 2 of 2) 4242 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-10 chr18 7004524 7004751 + 0.306326795069975 NA 5' UTR (NM_177595, exon 1 of 7) 5' UTR (NM_177595, exon 1 of 7) 142 NM_177595 210719 Mm.257186 NM_177595 ENSMUSG00000061013 Mkx 9430023B20Rik|Irxl1 mohawk homeobox protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-5 chr11 103140729 103141070 + 0.306326795069975 NA TTS (NM_027658) TTS (NM_027658) 7540 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-16 chr9 50767534 50767995 + 0.306326795069975 NA promoter-TSS (NM_198675) promoter-TSS (NM_198675) 420 NM_001361108 68721 Mm.171374 NM_023483 ENSMUSG00000037971 1110032A03Rik 4930500N06Rik|c11orf1 RIKEN cDNA 1110032A03 gene protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-6 chr14 27351200 27351551 + 0.306326795069975 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -10014 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-9 chr2 26309092 26309545 + 0.306326795069975 NA Intergenic Intergenic -5293 NM_001355576 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975 chr1 91087478 91087784 + 0.306326795069975 NA intron (NM_001310732, intron 9 of 24) intron (NM_001310732, intron 9 of 24) 34187 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975 chr13 104034189 104034498 + 0.306326795069975 NA intron (NM_029447, intron 12 of 12) intron (NM_029447, intron 12 of 12) 75271 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-13 chr6 50395933 50396337 + 0.306326795069975 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -13298 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-16 chr5 151705767 151706245 + 0.306326795069975 NA Intergenic Intergenic -54798 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-19 chr9 56370370 56370738 + 0.306326795069975 NA intron (NM_172924, intron 2 of 6) intron (NM_172924, intron 2 of 6) 47496 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-14 chr6 99440484 99440760 + 0.306326795069975 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -5277 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-12 chr2 137725095 137725461 + 0.306326795069975 NA Intergenic Intergenic -531306 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-5 chr8 70468240 70468666 + 0.306326795069975 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 8490 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-11 chr4 44012071 44012357 + 0.306326795069975 NA promoter-TSS (NM_001290470) promoter-TSS (NM_001290470) -429 NM_016760 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-8 chr19 32386926 32387298 + 0.306326795069975 NA intron (NM_144792, intron 1 of 9) intron (NM_144792, intron 1 of 9) 937 NM_001362423 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-7 chr15 39042293 39042559 + 0.306326795069975 NA Intergenic Intergenic -34506 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-11 chr2 60209280 60209570 + 0.306326795069975 NA promoter-TSS (NM_020575) promoter-TSS (NM_020575) -511 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-12 chr5 96209585 96209865 + 0.306326795069975 NA promoter-TSS (NM_053158) promoter-TSS (NM_053158) -390 NM_001039084 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding unique_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-3 chr4 45486710 45487476 + 0.306326795069975 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 43735 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-6 chr13 33028197 33028628 + 0.306326795069975 NA intron (NM_011452, intron 1 of 6) intron (NM_011452, intron 1 of 6) 998 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding unique_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-2 chr3 119957024 119957388 + 0.306326795069975 NA Intergenic Intergenic -173818 NM_019550 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-9 chr17 57031138 57031416 + 0.306326795069975 NA exon (NM_010613, exon 1 of 18) exon (NM_010613, exon 1 of 18) 230 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-17 chr6 99440437 99440738 + 0.306326795069975 NA intron (NM_001347345, intron 1 of 19) intron (NM_001347345, intron 1 of 19) -5242 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-18 chr8 61757285 61757572 + 0.306326795069975 NA intron (NM_001293772, intron 2 of 21) intron (NM_001293772, intron 2 of 21) 2670 NM_001293773 72333 Mm.29933 NM_001081390 ENSMUSG00000058056 Palld 2410003B16Rik|6030492A02 palladin, cytoskeletal associated protein protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-4 chr11 97959184 97959472 + 0.306326795069975 NA intron (NM_001163608, intron 2 of 13) intron (NM_001163608, intron 2 of 13) 27118 NM_028199 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-2 chr1 137078906 137079409 + 0.306326795069975 NA Intergenic Intergenic -118709 NM_030676 26424 Mm.16794 NM_030676 ENSMUSG00000026398 Nr5a2 AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B nuclear receptor subfamily 5, group A, member 2 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-17 chr9 109931125 109931515 + 0.306326795069975 NA promoter-TSS (NM_008633) promoter-TSS (NM_008633) -454 NM_001205331 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-10 chr2 163472214 163472488 + 0.306326795069975 NA promoter-TSS (NR_028122) promoter-TSS (NR_028122) -194 NR_028122 69517 Mm.395343 NR_028122 ENSMUSG00000053353 2310001K24Rik - RIKEN cDNA 2310001K24 gene ncRNA unique_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-4 chr4 139228364 139228718 + 0.306326795069975 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 34430 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-13 chr3 52554597 52555025 + 0.306326795069975 NA Intergenic Intergenic 37847 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-3 chr11 76588679 76588909 + 0.306326795069975 NA Intergenic Intergenic -11055 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-3 chr10 24582444 24582801 + 0.306326795069975 NA Intergenic Intergenic -12820 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975 chr1 128356911 128357434 + 0.306326795069975 NA intron (NM_008567, intron 1 of 16) intron (NM_008567, intron 1 of 16) 2533 NM_001313695 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding unique_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975 chr10 75932005 75932434 + 0.306326795069975 NA promoter-TSS (NM_175329) promoter-TSS (NM_175329) 283 NM_001306184 17385 Mm.4561 NM_008606 ENSMUSG00000000901 Mmp11 MMP-11|SL-3|ST3|Stmy3 matrix metallopeptidase 11 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-15 chr5 66549892 66550316 + 0.306326795069975 NA intron (NM_001310626, intron 1 of 15) intron (NM_001310626, intron 1 of 15) 68713 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-4 chr11 116319759 116320147 + 0.306326795069975 NA Intergenic Intergenic -13203 NM_001347636 53413 Mm.22530 NM_016857 ENSMUSG00000020792 Exoc7 Exo70|sec70 exocyst complex component 7 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-7 chr18 37954405 37954799 + 0.306326795069975 NA promoter-TSS (NM_153793) promoter-TSS (NM_153793) 386 NM_010411 15183 Mm.20521 NM_010411 ENSMUSG00000024454 Hdac3 AW537363 histone deacetylase 3 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-15 chr8 3500660 3500888 + 0.306326795069975 NA intron (NM_053177, intron 1 of 13) CpG 255 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding common_peak1_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-2 chr10 19163232 19163609 + 0.306326795069975 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) -3818 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-5 chr13 102900461 102900682 + 0.306326795069975 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 140316 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-14 chr5 31602688 31602988 + 0.306326795069975 NA Intergenic Intergenic -11113 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding unique_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-2 chr19 56813716 56814058 + 0.306326795069975 NA promoter-TSS (NM_170757) promoter-TSS (NM_170757) -204 NM_170757 213993 Mm.469677 NM_170757 ENSMUSG00000035173 Ccdc186 1810028B20Rik|A630007B06Rik|AI159700|Otg1 coiled-coil domain containing 186 protein-coding common_peak2_23_21_-0.148555972192048_4.38515363254127_0.306326795069975-8 chr15 103370377 103370924 + 0.306326795069975 NA Intergenic Intergenic -3859 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_101_81_0.0260594753725778_6.37058174230437_0.306326401119212-3 chr4 62277644 62278990 + 0.306326401119212 NA Intergenic Intergenic -8112 NM_025286 20530 Mm.292539 NM_025286 ENSMUSG00000066152 Slc31a2 AI604396|CTR2 solute carrier family 31, member 2 protein-coding common_peak2_98_83_-0.051470815726792_6.36658201491536_0.306326401119212 chr3 145924381 145924969 + 0.306326401119212 NA intron (NM_009740, intron 1 of 2) CpG 413 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_101_81_0.0260594753725778_6.37058174230437_0.306326401119212-2 chr16 57121777 57122431 + 0.306326401119212 NA exon (NM_138599, exon 1 of 12) exon (NM_138599, exon 1 of 12) 390 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70A protein-coding common_peak2_100_81_0.0119458946393296_6.36352495193775_0.306326401119212 chr8 128667413 128668132 + 0.306326401119212 NA Intergenic Intergenic -17882 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_100_81_0.0119458946393296_6.36352495193775_0.306326401119212 chr9 56417235 56418098 + 0.306326401119212 NA promoter-TSS (NM_025812) promoter-TSS (NM_025812) 384 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak1_101_81_0.0260594753725778_6.37058174230437_0.306326401119212 chr1 92933961 92935126 + 0.306326401119212 NA non-coding (NR_015525, exon 2 of 2) non-coding (NR_015525, exon 2 of 2) 135 NM_011796 23830 Mm.294315 NM_011796 ENSMUSG00000026270 Capn10 AW049679|Capn8|mKIAA1845 calpain 10 protein-coding common_peak1_99_84_-0.0541470535586379_6.38231740935838_0.306262585898493 chr15 79229021 79229814 + 0.306262585898493 NA promoter-TSS (NM_001045558) promoter-TSS (NM_001045558) 35 NM_001045558 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak1_102_82_0.0225479337113024_6.38631339820258_0.306262585898493 chr10 43689067 43689968 + 0.306262585898493 NA Intergenic Intergenic -56641 NR_040581 69443 Mm.484042 NR_040581 ENSMUSG00000111422 1700027J07Rik - RIKEN cDNA 1700027J07 gene ncRNA common_peak1_102_82_0.0225479337113024_6.38631339820258_0.306262585898493-2 chr10 84533123 84534714 + 0.306262585898493 NA promoter-TSS (NM_175451) promoter-TSS (NM_175451) -30 NM_175451 216197 Mm.334999 NM_175451 ENSMUSG00000046841 Ckap4 5630400A09Rik|CLIMP-63|P63 cytoskeleton-associated protein 4 protein-coding common_peak1_102_82_0.0225479337113024_6.38631339820258_0.306262585898493-3 chr11 95097071 95097901 + 0.306262585898493 NA Intergenic Intergenic -20675 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak1_99_84_-0.0541470535586379_6.38231740935838_0.306262585898493-2 chr3 108085503 108086529 + 0.306262585898493 NA promoter-TSS (NM_001346665) promoter-TSS (NM_001346665) 40 NM_001358018 791415 Mm.374791 NM_001358018 ENSMUSG00000056411 Gm12500 - predicted gene 12500 protein-coding common_peak1_102_82_0.0225479337113024_6.38631339820258_0.306262585898493-4 chr5 142906898 142907696 + 0.306262585898493 NA promoter-TSS (NM_007393) promoter-TSS (NM_007393) -543 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_100_85_-0.0567668554446845_6.39788132697976_0.306200290196897-3 chr8 33673385 33674709 + 0.306200290196897 NA intron (NM_010344, intron 4 of 12) intron (NM_010344, intron 4 of 12) 20809 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak1_101_85_-0.0426532747114363_6.40493811734638_0.306200290196897-2 chr3 69005199 69006584 + 0.306200290196897 NA intron (NM_001356976, intron 1 of 23) CpG 1153 NM_133786 70099 Mm.206841 NM_133786 ENSMUSG00000034349 Smc4 2500002A22Rik|C79747|SMC-4|Smc4l1 structural maintenance of chromosomes 4 protein-coding common_peak2_100_85_-0.0567668554446845_6.39788132697976_0.306200290196897-2 chr7 45922480 45923567 + 0.306200290196897 NA Intergenic Intergenic -1597 NM_010129 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak1_101_85_-0.0426532747114363_6.40493811734638_0.306200290196897 chr15 73243616 73245055 + 0.306200290196897 NA intron (NM_001358046, intron 24 of 34) intron (NM_001358046, intron 24 of 34) 10547 NR_029561 387169 NR_029561 ENSMUSG00000065612 Mir151 Mirn151|mir-151|mmu-mir-151 microRNA 151 ncRNA common_peak2_103_83_0.0191107925298635_6.40187281904369_0.306200290196897 chr17 87107483 87108410 + 0.306200290196897 NA 5' UTR (NM_019654, exon 1 of 3) 5' UTR (NM_019654, exon 1 of 3) 267 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_101_85_-0.0426532747114363_6.40493811734638_0.306200290196897 chr10 4108287 4109222 + 0.306200290196897 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 104366 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak2_100_85_-0.0567668554446845_6.39788132697976_0.306200290196897 chr17 23803225 23804279 + 0.306200290196897 NA intron (NM_175229, intron 1 of 13) CpG 565 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_104_84_0.0157456790623129_6.41726377566886_0.306139460379024 chr15 89429468 89430231 + 0.306139460379024 NA promoter-TSS (NR_004843) promoter-TSS (NR_004843) 78 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak1_104_84_0.0157456790623129_6.41726377566886_0.306139460379024 chr2 85050455 85051231 + 0.306139460379024 NA intron (NM_001081260, intron 1 of 11) intron (NM_001081260, intron 1 of 11) 383 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak1_102_86_-0.045356130790501_6.42026543045348_0.306139460379024-2 chr9 85326616 85328482 + 0.306139460379024 NA promoter-TSS (NM_001160378) promoter-TSS (NM_001160378) -399 NM_001160379 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_102_86_-0.045356130790501_6.42026543045348_0.306139460379024 chr1 162132026 162133407 + 0.306139460379024 NA intron (NM_001038619, intron 15 of 20) intron (NM_001038619, intron 15 of 20) -84907 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak2_102_86_-0.045356130790501_6.42026543045348_0.306139460379024-2 chr13 17943603 17945078 + 0.306139460379024 NA promoter-TSS (NM_019491) promoter-TSS (NM_019491) -123 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding common_peak2_102_86_-0.045356130790501_6.42026543045348_0.306139460379024 chr12 80115454 80116747 + 0.306139460379024 NA Intergenic Intergenic -3087 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_104_84_0.0157456790623129_6.41726377566886_0.306139460379024-2 chr8 128667277 128667991 + 0.306139460379024 NA Intergenic Intergenic -18020 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-7 chr16 11063520 11063733 + 0.306080386793804 NA Intergenic Intergenic -2672 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-19 chr6 34716801 34717162 + 0.306080386793804 NA intron (NM_145575, intron 1 of 11) intron (NM_145575, intron 1 of 11) 7537 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-13 chr4 155249576 155249782 + 0.306080386793804 NA promoter-TSS (NM_001190445) promoter-TSS (NM_001190445) -287 NM_001190445 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-4 chr11 104628718 104629173 + 0.306080386793804 NA intron (NM_016780, intron 2 of 14) RLTR17B_Mm|LTR|ERVK 20945 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-2 chr17 28259743 28260004 + 0.306080386793804 NA intron (NM_011145, intron 2 of 7) intron (NM_011145, intron 2 of 7) -11835 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-2 chr10 4109801 4110109 + 0.306080386793804 NA intron (NM_001170785, intron 26 of 27) intron (NM_001170785, intron 26 of 27) 103165 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-16 chr4 57559223 57559499 + 0.306080386793804 NA Intergenic Intergenic -8887 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-22 chr8 92852611 92852983 + 0.306080386793804 NA 3' UTR (NM_008610, exon 13 of 13) 3' UTR (NM_008610, exon 13 of 13) -2536 NM_173014 270084 Mm.21463 NM_173014 ENSMUSG00000033192 Lpcat2 1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2 lysophosphatidylcholine acyltransferase 2 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-3 chr10 93308813 93309122 + 0.306080386793804 NA intron (NM_001322265, intron 1 of 4) intron (NM_001322265, intron 1 of 4) 2192 NM_001322268 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-11 chr8 106198348 106198807 + 0.306080386793804 NA non-coding (NR_151676, exon 9 of 9) non-coding (NR_151676, exon 9 of 9) 12356 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-5 chr13 56665004 56665346 + 0.306080386793804 NA Intergenic Intergenic -37835 NM_008541 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804 chr1 91816083 91816510 + 0.306080386793804 NA intron (NM_007855, intron 1 of 1) intron (NM_007855, intron 1 of 1) 14835 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding unique_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-2 chr7 25377696 25377940 + 0.306080386793804 NA intron (NR_073027, intron 1 of 5) intron (NR_073027, intron 1 of 5) 999 NR_073027 654804 Mm.389841 NM_001039540 ENSMUSG00000053714 4732471J01Rik - RIKEN cDNA 4732471J01 gene ncRNA common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-3 chr13 5841559 5841924 + 0.306080386793804 NA Intergenic Intergenic 16351 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-13 chr7 127615353 127615618 + 0.306080386793804 NA promoter-TSS (NR_155452) promoter-TSS (NR_155452) -213 NR_155451 320683 Mm.156718 NM_177226 ENSMUSG00000045639 Zfp629 9330199A09Rik|Znf629 zinc finger protein 629 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-12 chr19 8803922 8804197 + 0.306080386793804 NA exon (NM_001098237, exon 2 of 2) exon (NM_001098237, exon 2 of 2) 1529 NM_001098237 75291 Mm.23423 NM_133759 ENSMUSG00000071661 Zbtb3 4930563M09Rik zinc finger and BTB domain containing 3 protein-coding unique_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-4 chr4 88790987 88791212 + 0.306080386793804 NA promoter-TSS (NM_001243166) promoter-TSS (NM_001243166) 204 NM_001098841 545651 Mm.149203 NM_001098841 ENSMUSG00000101163 Gm13278 - predicted gene 13278 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-2 chr1 132390976 132391514 + 0.306080386793804 NA promoter-TSS (NM_001311107) promoter-TSS (NM_001311107) 141 NM_178874 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-9 chr2 29422953 29423401 + 0.306080386793804 NA intron (NM_001290489, intron 2 of 6) intron (NM_001290489, intron 2 of 6) 44663 NM_001290490 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-10 chr2 117673420 117673953 + 0.306080386793804 NA Intergenic Intergenic 139116 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-15 chr2 181600730 181601175 + 0.306080386793804 NA promoter-TSS (NM_133701) promoter-TSS (NM_133701) -367 NM_133701 68879 Mm.292001 NM_133701 ENSMUSG00000002455 Prpf6 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K pre-mRNA splicing factor 6 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-14 chr9 57260239 57260641 + 0.306080386793804 NA intron (NM_028820, intron 1 of 2) intron (NM_028820, intron 1 of 2) 2159 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-2 chr10 70096677 70097043 + 0.306080386793804 NA promoter-TSS (NM_001111121) promoter-TSS (NM_001111121) -261 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-9 chr4 59315932 59316196 + 0.306080386793804 NA intron (NM_001163288, intron 15 of 16) intron (NM_001163288, intron 15 of 16) 56013 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 - predicted gene 12596 ncRNA common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-11 chr19 18810529 18810832 + 0.306080386793804 NA intron (NM_153417, intron 14 of 38) intron (NM_153417, intron 14 of 38) 60697 NM_153417 225997 Mm.215171 NM_153417 ENSMUSG00000024727 Trpm6 CHAK2|TRPM6/CHAK2 transient receptor potential cation channel, subfamily M, member 6 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-13 chr9 32750127 32750490 + 0.306080386793804 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 54266 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-17 chr5 35687531 35687828 + 0.306080386793804 NA Intergenic Intergenic -7899 NM_030127 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-16 chr7 98558155 98558573 + 0.306080386793804 NA Intergenic Intergenic 64142 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-12 chr6 147475951 147476273 + 0.306080386793804 NA promoter-TSS (NM_001355713) promoter-TSS (NM_001355713) 241 NM_001355715 67015 Mm.209774 NM_025911 ENSMUSG00000030301 Ccdc91 1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56 coiled-coil domain containing 91 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-6 chr14 65261876 65262271 + 0.306080386793804 NA intron (NM_021458, intron 1 of 6) CpG 390 NM_021458 14365 Mm.214687 NM_021458 ENSMUSG00000007989 Fzd3 AU020229|D930050A07Rik|Fz3 frizzled class receptor 3 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804 chr1 77495862 77496357 + 0.306080386793804 NA TTS (NR_105770) TTS (NR_105770) 659 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-9 chr2 31973962 31974242 + 0.306080386793804 NA promoter-TSS (NM_172268) promoter-TSS (NM_172268) -348 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-3 chr11 103141654 103141992 + 0.306080386793804 NA Intergenic Intergenic 8464 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-21 chr8 89039418 89039911 + 0.306080386793804 NA intron (NM_021390, intron 2 of 3) intron (NM_021390, intron 2 of 3) 4498 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding unique_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804 chr13 73691652 73692198 + 0.306080386793804 NA intron (NM_028878, intron 2 of 11) intron (NM_028878, intron 2 of 11) 711 NM_001359603 74338 Mm.271635 NM_028878 ENSMUSG00000021565 Slc6a19 4632401C08Rik|B<0>AT1 solute carrier family 6 (neurotransmitter transporter), member 19 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-4 chr12 99352040 99352347 + 0.306080386793804 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 97881 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-10 chr19 6950631 6950881 + 0.306080386793804 NA exon (NM_007522, exon 3 of 4) exon (NM_007522, exon 3 of 4) 8194 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-11 chr19 6941078 6941331 + 0.306080386793804 NA promoter-TSS (NM_007522) promoter-TSS (NM_007522) -11 NM_001177360 107173 Mm.276555 NM_207220 ENSMUSG00000024958 Gpr137 AI428855 G protein-coupled receptor 137 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-11 chr5 144014585 144014886 + 0.306080386793804 NA exon (NM_177682, exon 1 of 15) exon (NM_177682, exon 1 of 15) 118 NM_177682 231874 Mm.320432 NM_177682 ENSMUSG00000029617 Ccz1 AU022870 CCZ1 vacuolar protein trafficking and biogenesis associated protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-9 chr17 31564183 31564374 + 0.306080386793804 NA promoter-TSS (NM_016670) promoter-TSS (NM_016670) -495 NR_027493 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-7 chr2 32915214 32915599 + 0.306080386793804 NA intron (NM_146119, intron 5 of 13) intron (NM_146119, intron 5 of 13) 39272 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-13 chr3 107742621 107742993 + 0.306080386793804 NA 3' UTR (NM_001113529, exon 9 of 9) 3' UTR (NM_001113529, exon 9 of 9) 17662 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-19 chr6 6211818 6212248 + 0.306080386793804 NA intron (NM_001177572, intron 1 of 17) intron (NM_001177572, intron 1 of 17) 5140 NM_015829 50799 Mm.24513 NM_015829 ENSMUSG00000015112 Slc25a13 AI785475|Ctrn solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein-coding unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804 chr11 88614367 88614821 + 0.306080386793804 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -4657 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-12 chr4 83379411 83379758 + 0.306080386793804 NA intron (NR_045450, intron 2 of 2) intron (NR_045450, intron 2 of 2) 11084 NR_045450 790913 Mm.406752 NR_045450 ENSMUSG00000086321 Gm11413 - predicted gene 11413 ncRNA common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-10 chr17 70847213 70847494 + 0.306080386793804 NA promoter-TSS (NM_001164077) promoter-TSS (NM_001164077) -576 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804 chr10 81183865 81184493 + 0.306080386793804 NA intron (NM_001190473, intron 2 of 8) intron (NM_001190473, intron 2 of 8) 261 NM_007828 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-9 chr17 45789950 45790467 + 0.306080386793804 NA Intergenic Intergenic 55702 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA unique_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-3 chr18 37825097 37825421 + 0.306080386793804 NA intron (NM_033587, intron 2 of 3) intron (NM_033587, intron 2 of 3) 5713 NM_033583 93708 Mm.247203 NM_033583 ENSMUSG00000102543 Pcdhgc5 - protocadherin gamma subfamily C, 5 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-5 chr12 111759801 111760049 + 0.306080386793804 NA intron (NM_001361610, intron 1 of 14) intron (NM_001361610, intron 1 of 14) 1057 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804 chr1 127868792 127868994 + 0.306080386793804 NA intron (NM_178690, intron 1 of 23) CpG 120 NM_178690 226407 Mm.489713 NM_178690 ENSMUSG00000036104 Rab3gap1 1700003B17Rik|4732493F09Rik|AL117896|Rab3gap|p130 RAB3 GTPase activating protein subunit 1 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-4 chr12 85474194 85474615 + 0.306080386793804 NA intron (NM_010234, intron 1 of 3) CpG 514 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-8 chr17 6270540 6270879 + 0.306080386793804 NA intron (NM_001033178, intron 1 of 16) CpG 239 NM_001033178 77106 Mm.381893 NM_001033178 ENSMUSG00000038141 Tmem181a 5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423 transmembrane protein 181A protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-5 chr14 66822265 66822756 + 0.306080386793804 NA intron (NM_009955, intron 8 of 13) intron (NM_009955, intron 8 of 13) 46090 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-3 chrX 7714129 7714568 + 0.306080386793804 NA Intergenic CpG -7872 NM_172372 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-13 chr19 40492459 40492842 + 0.306080386793804 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 21086 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-3 chr10 84440209 84440547 + 0.306080386793804 NA promoter-TSS (NM_001004363) promoter-TSS (NM_001004363) 93 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804 chr16 49953427 49953981 + 0.306080386793804 NA Intergenic Intergenic -2126 NR_153658 100503490 Mm.72499 NR_153658 Gm19723 - predicted gene, 19723 ncRNA common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-11 chr4 83379442 83379688 + 0.306080386793804 NA intron (NR_045450, intron 2 of 2) intron (NR_045450, intron 2 of 2) 11103 NR_045450 790913 Mm.406752 NR_045450 ENSMUSG00000086321 Gm11413 - predicted gene 11413 ncRNA unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-5 chr2 27246718 27247200 + 0.306080386793804 NA 5' UTR (NM_138665, exon 1 of 21) 5' UTR (NM_138665, exon 1 of 21) 344 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-10 chr3 37936886 37937256 + 0.306080386793804 NA intron (NR_040559, intron 2 of 3) MIR|SINE|MIR 38258 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-7 chr15 27630965 27631223 + 0.306080386793804 NA promoter-TSS (NM_001013792) promoter-TSS (NM_001013792) -401 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-18 chr9 108223278 108223595 + 0.306080386793804 NA intron (NM_001276485, intron 1 of 2) intron (NM_001276485, intron 1 of 2) -33053 NM_007567 12217 Mm.20425 NM_007567 ENSMUSG00000032589 Bsn - bassoon protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-2 chr1 169695005 169695338 + 0.306080386793804 NA 3' UTR (NM_009063, exon 5 of 5) 3' UTR (NM_009063, exon 5 of 5) 39670 NM_009063 19737 Mm.20954 NM_009063 ENSMUSG00000026678 Rgs5 1110070A02Rik regulator of G-protein signaling 5 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-4 chr11 97744865 97745080 + 0.306080386793804 NA promoter-TSS (NM_054051) promoter-TSS (NM_054051) 75 NR_106180 102466256 NR_106180 ENSMUSG00000098919 Mir8102 Gm27795|mmu-mir-8102 microRNA 8102 ncRNA common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-6 chr14 76881100 76881510 + 0.306080386793804 NA Intergenic Intergenic 121174 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-23 chrX 169358217 169358715 + 0.306080386793804 NA intron (NM_001361166, intron 4 of 5) intron (NM_001361166, intron 4 of 5) 38071 NM_001361166 101055907 NM_001361166 Gm15246 - predicted gene 15246 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-3 chr12 80231485 80231848 + 0.306080386793804 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 28705 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-16 chr4 109280722 109281077 + 0.306080386793804 NA intron (NM_007943, intron 1 of 24) CpG 624 NM_007943 13858 Mm.318250 NM_007943 ENSMUSG00000028552 Eps15 2410112D09Rik epidermal growth factor receptor pathway substrate 15 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-8 chr18 75498092 75498496 + 0.306080386793804 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -16351 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-12 chr3 30012176 30012459 + 0.306080386793804 NA intron (NM_001361034, intron 2 of 16) intron (NM_001361034, intron 2 of 16) 887 NM_007963 14013 Mm.56965 NM_007963 ENSMUSG00000027684 Mecom D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1 MDS1 and EVI1 complex locus protein-coding unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-2 chr15 78450718 78451062 + 0.306080386793804 NA intron (NM_001355601, intron 10 of 17) intron (NM_001355601, intron 10 of 17) 17744 NM_001355601 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-14 chr6 113638552 113638985 + 0.306080386793804 NA intron (NM_001113553, intron 1 of 11) intron (NM_001113553, intron 1 of 11) 301 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding unique_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804 chr19 32348855 32349179 + 0.306080386793804 NA 5' UTR (NM_001168525, exon 1 of 10) 5' UTR (NM_001168525, exon 1 of 10) 299 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-5 chr12 86857198 86857497 + 0.306080386793804 NA Intergenic Intergenic 27467 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-3 chr11 8628619 8628870 + 0.306080386793804 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 35791 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804 chr1 135813599 135813916 + 0.306080386793804 NA Intergenic Intergenic -4841 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-6 chr14 70332126 70332529 + 0.306080386793804 NA intron (NM_144808, intron 1 of 9) intron (NM_144808, intron 1 of 9) 16106 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding unique_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-2 chr15 13256626 13257074 + 0.306080386793804 NA Intergenic Intergenic -83175 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-20 chr6 83572161 83572415 + 0.306080386793804 NA 5' UTR (NM_001362078, exon 1 of 10) 5' UTR (NM_001362078, exon 1 of 10) 216 NM_001362078 70527 Mm.32801 NM_024239 ENSMUSG00000006906 Stambp 5330424L14Rik|5730422L11Rik|AW107289|Amsh|mKIAA4198 STAM binding protein protein-coding common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-5 chr14 32201391 32201696 + 0.306080386793804 NA promoter-TSS (NM_001359915) promoter-TSS (NM_001359915) 348 NM_016897 53600 Mm.303703 NM_016897 ENSMUSG00000013701 Timm23 Tim23 translocase of inner mitochondrial membrane 23 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-15 chr4 45484069 45484627 + 0.306080386793804 NA intron (NM_001033306, intron 2 of 5) intron (NM_001033306, intron 2 of 5) 46480 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-14 chr9 61670030 61670450 + 0.306080386793804 NA Intergenic Intergenic 244270 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-6 chr13 38204999 38205244 + 0.306080386793804 NA exon (NM_026382, exon 1 of 9) exon (NM_026382, exon 1 of 9) 182 NM_026382 67797 Mm.250783 NM_026382 ENSMUSG00000021431 Snrnp48 1110050F08Rik|6530403A03Rik|C6orf151 small nuclear ribonucleoprotein 48 (U11/U12) protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-15 chr7 29983993 29984180 + 0.306080386793804 NA 5' UTR (NM_001167873, exon 1 of 10) 5' UTR (NM_001167873, exon 1 of 10) 131 NM_001167872 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding unique_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804 chr3 137981054 137981469 + 0.306080386793804 NA intron (NM_011932, intron 1 of 8) intron (NM_011932, intron 1 of 8) 288 NM_001310753 26377 Mm.254835 NM_011932 ENSMUSG00000028159 Dapp1 Bam32 dual adaptor for phosphotyrosine and 3-phosphoinositides 1 protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804 chr1 132318934 132319285 + 0.306080386793804 NA intron (NM_001195025, intron 1 of 7) MIRb|SINE|MIR 2984 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-2 chr10 60208630 60209005 + 0.306080386793804 NA intron (NM_016803, intron 1 of 3) intron (NM_016803, intron 1 of 3) 10443 NM_016803 53374 Mm.12866 NM_016803 ENSMUSG00000057337 Chst3 C6ST|C6ST-1|GST-0 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804 chr1 165460644 165460937 + 0.306080386793804 NA promoter-TSS (NM_027430) promoter-TSS (NM_027430) -327 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-18 chr5 147076110 147076416 + 0.306080386793804 NA intron (NM_080795, intron 1 of 9) CpG 309 NM_080795 140887 Mm.272203 NM_080795 ENSMUSG00000016520 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-6 chr15 3996153 3996510 + 0.306080386793804 NA promoter-TSS (NM_145930) promoter-TSS (NM_145930) 292 NR_045740 328489 Mm.447020 NR_045740 ENSMUSG00000097662 Gm2093 100039196|A630020A06 predicted gene 2093 ncRNA common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-6 chr14 70443711 70444026 + 0.306080386793804 NA promoter-TSS (NM_001164082) promoter-TSS (NM_001164082) 358 NR_029802 723838 NR_029802 ENSMUSG00000065528 Mir320 Mirn320|mir-320|mmu-mir-320 microRNA 320 ncRNA common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-4 chr13 45906956 45907325 + 0.306080386793804 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 57851 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-14 chr3 116007566 116007938 + 0.306080386793804 NA promoter-TSS (NM_023214) promoter-TSS (NM_023214) 303 NM_001163515 58193 Mm.41739 NM_021388 ENSMUSG00000027963 Extl2 3000001D04Rik|AW146439 exostoses (multiple)-like 2 protein-coding common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-8 chr2 70182730 70183113 + 0.306080386793804 NA intron (NM_177376, intron 8 of 34) intron (NM_177376, intron 8 of 34) 143795 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-7 chr18 35299413 35299731 + 0.306080386793804 NA intron (NM_001360814, intron 7 of 9) intron (NM_001360814, intron 7 of 9) -84548 NM_178005 107065 Mm.39900 NM_178005 ENSMUSG00000071862 Lrrtm2 AI851755|BB129880|C630011A14Rik|mKIAA0416 leucine rich repeat transmembrane neuronal 2 protein-coding unique_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-3 chr2 51140755 51141111 + 0.306080386793804 NA intron (NM_028810, intron 2 of 4) intron (NM_028810, intron 2 of 4) 8178 NM_028810 74194 Mm.46497 NM_028810 ENSMUSG00000017144 Rnd3 2610017M01Rik|AI661404|Arhe|Rhoe Rho family GTPase 3 protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-11 chr4 5794492 5794926 + 0.306080386793804 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 70397 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-7 chr17 33781822 33782224 + 0.306080386793804 NA promoter-TSS (NM_020581) promoter-TSS (NM_020581) -448 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-3 chr16 57563871 57564329 + 0.306080386793804 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 14858 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-2 chr11 16845137 16845549 + 0.306080386793804 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 93140 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-7 chr14 47374023 47374379 + 0.306080386793804 NA intron (NM_001145953, intron 1 of 5) CpG 341 NM_001145953 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-20 chr6 146956233 146956604 + 0.306080386793804 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -1997 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-17 chr5 135911648 135911969 + 0.306080386793804 NA intron (NM_018871, intron 1 of 1) intron (NM_018871, intron 1 of 1) 22833 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-6 chr2 31069221 31069432 + 0.306080386793804 NA intron (NM_001355105, intron 6 of 15) intron (NM_001355105, intron 6 of 15) 27174 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-14 chr2 30350679 30350939 + 0.306080386793804 NA intron (NM_001346806, intron 3 of 12) intron (NM_001346806, intron 3 of 12) 8507 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-21 chr8 126825947 126826247 + 0.306080386793804 NA Intergenic Intergenic -22923 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak1_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-10 chr5 143622687 143623010 + 0.306080386793804 NA intron (NM_011182, intron 1 of 12) CpG 401 NM_011182 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-9 chr18 66335248 66335737 + 0.306080386793804 NA Intergenic Intergenic -43654 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-4 chr17 79355257 79355651 + 0.306080386793804 NA promoter-TSS (NM_026514) promoter-TSS (NM_026514) -363 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-12 chr7 110108823 110109282 + 0.306080386793804 NA Intergenic Intergenic -13007 NM_001355058 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-17 chr8 35596703 35597034 + 0.306080386793804 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -7848 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_25_22_-0.0980237816019001_4.47455006525606_0.306080386793804-8 chr16 37539274 37539584 + 0.306080386793804 NA promoter-TSS (NM_001042499) promoter-TSS (NM_001042499) 360 NM_028812 74197 Mm.287795 NM_028812 ENSMUSG00000022828 Gtf2e1 2610024P03Rik|56kDa|AI303800|FE|TFIIE-A general transcription factor II E, polypeptide 1 (alpha subunit) protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-5 chr13 67108223 67108579 + 0.306080386793804 NA intron (NM_001256052, intron 2 of 6) intron (NM_001256052, intron 2 of 6) 5627 NM_001256052 432770 Mm.124021 NM_001256052 ENSMUSG00000074824 Rslcan18 mszf51 regulator of sex-limitation candidate 18 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-18 chr6 34602103 34602497 + 0.306080386793804 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 3796 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-22 chr9 20644875 20645068 + 0.306080386793804 NA promoter-TSS (NM_001286530) promoter-TSS (NM_001286530) 168 NR_153859 66177 Mm.390165 NM_025401 ENSMUSG00000084786 Ubl5 1110030M22Rik|beacon ubiquitin-like 5 protein-coding unique_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-7 chr8 120276582 120277128 + 0.306080386793804 NA Intergenic Intergenic -48625 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-4 chr12 80371867 80372620 + 0.306080386793804 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 19434 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_24_22_-0.154208114331461_4.44645789889128_0.306080386793804-8 chr2 4560059 4560334 + 0.306080386793804 NA 5' UTR (NM_001177844, exon 1 of 12) 5' UTR (NM_001177844, exon 1 of 12) 442 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-10 chr5 30814750 30815144 + 0.306080386793804 NA intron (NM_133350, intron 1 of 6) CpG 306 NM_133350 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak1_26_21_0.0201702118361053_4.46951672455535_0.306080386793804-8 chr16 17406043 17406352 + 0.306080386793804 NA exon (NM_023348, exon 1 of 5) exon (NM_023348, exon 1 of 5) 117 NM_001001983 224020 Mm.5718 NM_001001983 ENSMUSG00000041720 Pi4ka Pik4ca phosphatidylinositol 4-kinase alpha protein-coding common_peak2_105_85_0.0124503209945184_6.43248991519936_0.306080045305055-3 chr7 113148085 113149245 + 0.306080045305055 NA Intergenic Intergenic -6650 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak1_105_85_0.0124503209945184_6.43248991519936_0.306080045305055 chr1 187215176 187216087 + 0.306080045305055 NA promoter-TSS (NM_028848) promoter-TSS (NM_028848) -112 NM_001357645 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak2_105_85_0.0124503209945184_6.43248991519936_0.306080045305055-2 chr4 150048531 150049530 + 0.306080045305055 NA Intergenic CpG -19424 NR_029751 723848 NR_029751 ENSMUSG00000065493 Mir34a Mirn34a|mir-34a|mmu-mir-34a microRNA 34a ncRNA common_peak2_105_85_0.0124503209945184_6.43248991519936_0.306080045305055-4 chr8 24572232 24573031 + 0.306080045305055 NA intron (NM_145949, intron 1 of 9) intron (NM_145949, intron 1 of 9) 3702 NM_145949 209176 Mm.219580 NM_145949 ENSMUSG00000031549 Ido2 AI265623|C230043N17Rik|Ido-2|Indol1 indoleamine 2,3-dioxygenase 2 protein-coding common_peak2_103_87_-0.0480034033286731_6.43542991697296_0.306080045305055-2 chr6 113697139 113698165 + 0.306080045305055 NA intron (NM_001347356, intron 1 of 7) CpG 602 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_105_85_0.0124503209945184_6.43248991519936_0.306080045305055-2 chr18 75457127 75457901 + 0.306080045305055 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -57131 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_105_85_0.0124503209945184_6.43248991519936_0.306080045305055 chr12 71136132 71137086 + 0.306080045305055 NA promoter-TSS (NM_029818) promoter-TSS (NM_029818) 66 NM_001024853 30056 Mm.207767 NM_013896 ENSMUSG00000021079 Timm9 2810011L15Rik|Tim10a|Timm10 translocase of inner mitochondrial membrane 9 protein-coding common_peak2_103_87_-0.0480034033286731_6.43542991697296_0.306080045305055 chr2 103797239 103797964 + 0.306080045305055 NA promoter-TSS (NM_001111290) promoter-TSS (NM_001111290) 39 NM_001111291 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak1_237_197_-0.0319766723155164_7.61336828392185_0.306028318794358 chr1 132333123 132335334 + 0.306028318794358 NA TTS (NM_028778) TTS (NM_028778) 18103 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_104_88_-0.050596815766383_6.45043502308321_0.306021996186002 chr16 4603488 4604667 + 0.306021996186002 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 9364 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_104_88_-0.050596815766383_6.45043502308321_0.306021996186002 chr6 134920117 134921512 + 0.306021996186002 NA 5' UTR (NM_009875, exon 1 of 3) 5' UTR (NM_009875, exon 1 of 3) 413 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding common_peak1_106_86_0.00922254118043053_6.44755476643894_0.306021996186002 chr6 17491092 17492523 + 0.306021996186002 NA exon (NM_008591, exon 3 of 22) exon (NM_008591, exon 3 of 22) 27850 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_104_88_-0.050596815766383_6.45043502308321_0.306021996186002-2 chr7 132930826 132932101 + 0.306021996186002 NA 5' UTR (NM_001362198, exon 1 of 11) 5' UTR (NM_001362198, exon 1 of 11) 321 NM_001362198 360216 Mm.389984 NM_207302 ENSMUSG00000030967 Zranb1 9330160G10Rik|D7Wsu87e|Gm1956|Trabid zinc finger, RAN-binding domain containing 1 protein-coding common_peak1_107_86_0.0225483754781868_6.45421768358782_0.306021996186002 chr10 84392702 84393617 + 0.306021996186002 NA intron (NM_001004363, intron 3 of 6) intron (NM_001004363, intron 3 of 6) 47312 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak1_108_87_0.0192632664911487_6.46906325188287_0.305965266451351 chr1 132326189 132327543 + 0.305965266451351 NA intron (NM_001195025, intron 3 of 7) intron (NM_001195025, intron 3 of 7) 10741 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_108_87_0.0192632664911487_6.46906325188287_0.305965266451351-4 chr17 23676904 23677401 + 0.305965266451351 NA intron (NM_013749, intron 1 of 3) CpG 297 NM_001161746 27279 Mm.28518 NM_013749 ENSMUSG00000023905 Tnfrsf12a AI255180|C87282|Fn14|HPIP|TWEAK-R|TweakR tumor necrosis factor receptor superfamily, member 12a protein-coding common_peak1_108_87_0.0192632664911487_6.46906325188287_0.305965266451351-3 chr16 4603530 4604702 + 0.305965266451351 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 9403 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_108_87_0.0192632664911487_6.46906325188287_0.305965266451351-2 chr12 4592570 4593755 + 0.305965266451351 NA 5' UTR (NM_001198968, exon 1 of 40) 5' UTR (NM_001198968, exon 1 of 40) 154 NM_001198968 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding common_peak1_241_200_-0.0297959097758476_7.636153736291_0.305952775937784 chr16 31597300 31598950 + 0.305952775937784 NA Intergenic Intergenic -20008 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak1_107_90_-0.0423027688717816_6.48664325576281_0.305909811623605 chr18 24723146 24724320 + 0.305909811623605 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 15110 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak2_106_90_-0.0556286031695379_6.47998033861393_0.305909811623605 chr12 33175807 33177410 + 0.305909811623605 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 28922 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_107_90_-0.0423027688717816_6.48664325576281_0.305909811623605-2 chr17 48408699 48409650 + 0.305909811623605 NA promoter-TSS (NM_001357903) promoter-TSS (NM_001357903) 646 NM_001110832 18044 Mm.4929 NM_010913 ENSMUSG00000023994 Nfya AA407810|Cbf-b|SEZ-10|SEZ10 nuclear transcription factor-Y alpha protein-coding common_peak1_109_88_0.0160438908112965_6.48375537637205_0.305909811623605 chr8 70489902 70490662 + 0.305909811623605 NA Intergenic Intergenic -2849 NM_018827 12931 Mm.335584 NM_018827 ENSMUSG00000007888 Crlf1 CLF-1|CRLM-3|CRLM3|NR6|NR6.1 cytokine receptor-like factor 1 protein-coding common_peak1_107_90_-0.0423027688717816_6.48664325576281_0.305909811623605-2 chr8 12804299 12805616 + 0.305909811623605 NA intron (NM_015804, intron 1 of 28) intron (NM_015804, intron 1 of 28) 26962 NR_045775 100504249 Mm.441494 NR_045775 ENSMUSG00000084780 Gm15350 - predicted gene 15350 ncRNA common_peak2_107_90_-0.0423027688717816_6.48664325576281_0.305909811623605 chr10 61679866 61680932 + 0.305909811623605 NA promoter-TSS (NR_126477) promoter-TSS (NR_126477) -109 NR_126477 75539 NR_126477 1700022H01Rik - RIKEN cDNA 1700022H01 gene ncRNA common_peak2_243_202_-0.0322898070287883_7.64919101367078_0.305903669976917 chr12 8497817 8499885 + 0.305903669976917 NA 3' UTR (NM_007483, exon 1 of 1) 3' UTR (NM_007483, exon 1 of 1) 1158 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-9 chr9 80165109 80165519 + 0.305855887145851 NA intron (NM_001039546, intron 1 of 32) CpG 280 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-11 chr5 100608893 100609222 + 0.305855887145851 NA Intergenic Intergenic -36852 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851 chr1 72428070 72428630 + 0.305855887145851 NA 3' UTR (NM_001045533, exon 4 of 4) 3' UTR (NM_001045533, exon 4 of 4) 108214 NM_001045533 381270 Mm.337023 NM_001045533 ENSMUSG00000039372 March4 BC056494|mKIAA1399 membrane-associated ring finger (C3HC4) 4 protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-2 chr13 3694401 3694832 + 0.305855887145851 NA Intergenic Intergenic 60584 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-12 chr5 142367904 142368379 + 0.305855887145851 NA Intergenic Intergenic -33356 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-5 chr19 43663875 43664500 + 0.305855887145851 NA exon (NM_145156, exon 4 of 4) exon (NM_145156, exon 4 of 4) 10694 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-4 chr15 51805999 51806281 + 0.305855887145851 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 59321 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-8 chr3 37883331 37883742 + 0.305855887145851 NA Intergenic Intergenic -15277 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851 chr11 78176411 78176598 + 0.305855887145851 NA intron (NM_080849, intron 1 of 14) intron (NM_080849, intron 1 of 14) 162 NM_080849 140859 Mm.23788 NM_080849 ENSMUSG00000017405 Nek8 4632401F23Rik|b2b1449Clo|jck NIMA (never in mitosis gene a)-related expressed kinase 8 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-7 chr17 88627673 88627983 + 0.305855887145851 NA intron (NM_029858, intron 1 of 3) intron (NM_029858, intron 1 of 3) 1273 NM_029858 77057 Mm.482203 NM_029858 ENSMUSG00000033855 Ston1 4921524J06Rik|C86231|Salf|Sblf stonin 1 protein-coding unique_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-2 chr9 110653656 110654217 + 0.305855887145851 NA exon (NM_183276, exon 1 of 54) exon (NM_183276, exon 1 of 54) 225 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-10 chr4 125131975 125132285 + 0.305855887145851 NA Intergenic Intergenic -4249 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-5 chr15 8109503 8109753 + 0.305855887145851 NA intron (NM_133227, intron 1 of 34) intron (NM_133227, intron 1 of 34) 315 NM_133227 170762 Mm.295168 NM_133227 ENSMUSG00000022142 Nup155 D930027M19Rik|mKIAA0791 nucleoporin 155 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851 chr13 42575637 42576064 + 0.305855887145851 NA Intergenic Intergenic -104949 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-15 chr8 94290240 94290539 + 0.305855887145851 NA intron (NM_001357268, intron 3 of 20) intron (NM_001357268, intron 3 of 20) 21783 NM_001357268 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-4 chr13 63565709 63566136 + 0.305855887145851 NA promoter-TSS (NM_008957) promoter-TSS (NM_008957) -187 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes|wig patched 1 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-6 chr16 90846015 90846246 + 0.305855887145851 NA intron (NM_001316761, intron 1 of 5) intron (NM_001316761, intron 1 of 5) 15271 NM_001316761 70967 Mm.253077 NM_027627 ENSMUSG00000039903 Eva1c 1700092M14Rik|4931408A02Rik|Fam176c eva-1 homolog C (C. elegans) protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-7 chr9 40192375 40192627 + 0.305855887145851 NA intron (NR_153114, intron 1 of 6) CpG 185 NM_030713 80902 Mm.132196 NM_030713 ENSMUSG00000025602 Zfp202 C130037E22Rik|Znf202 zinc finger protein 202 protein-coding unique_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-3 chr3 121891830 121892152 + 0.305855887145851 NA Intergenic Intergenic -61238 NM_172525 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-9 chr3 144577354 144577725 + 0.305855887145851 NA intron (NM_053102, intron 1 of 4) intron (NM_053102, intron 1 of 4) 7112 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-3 chr13 41385883 41386412 + 0.305855887145851 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -27146 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-13 chr7 135538031 135538355 + 0.305855887145851 NA intron (NM_001316678, intron 1 of 19) CpG 369 NM_001316678 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-6 chr2 125356380 125356853 + 0.305855887145851 NA intron (NM_007993, intron 32 of 65) intron (NM_007993, intron 32 of 65) 109101 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-12 chr9 51105683 51106157 + 0.305855887145851 NA Intergenic Intergenic -2275 NR_029655 723849 NR_029655 ENSMUSG00000065492 Mir34b Mirn34b|mir-34b|mmu-mir-34b microRNA 34b ncRNA common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-9 chr5 23712217 23712571 + 0.305855887145851 NA intron (NR_015554, intron 1 of 4) CpG 273 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-7 chr2 126305057 126305515 + 0.305855887145851 NA Intergenic Intergenic 153145 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-3 chr10 67099056 67099416 + 0.305855887145851 NA Intergenic Intergenic -2248 NM_178606 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-4 chr16 44173309 44173554 + 0.305855887145851 NA promoter-TSS (NM_001029889) promoter-TSS (NM_001029889) 34 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-14 chr8 124897072 124897292 + 0.305855887145851 NA promoter-TSS (NM_001111141) promoter-TSS (NM_001111141) 523 NM_198103 102058 Mm.347360 NM_198103 ENSMUSG00000074030 Exoc8 AI414418|EXO84|Exo84p|R74783|SEC84 exocyst complex component 8 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-5 chr16 11323025 11323593 + 0.305855887145851 NA intron (NM_028964, intron 1 of 20) intron (NM_028964, intron 1 of 20) 405 NM_028964 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851 chr1 59236860 59237156 + 0.305855887145851 NA promoter-TSS (NM_001159948) promoter-TSS (NM_001159948) 85 NM_001159948 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 alsin Rho guanine nucleotide exchange factor protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-6 chr8 72492999 72493274 + 0.305855887145851 NA promoter-TSS (NM_177766) promoter-TSS (NM_177766) -522 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-3 chr12 70467408 70467774 + 0.305855887145851 NA TTS (NM_028339) TTS (NM_028339) 14437 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-2 chr10 4334574 4334959 + 0.305855887145851 NA intron (NM_031185, intron 2 of 3) intron (NM_031185, intron 2 of 3) 52709 NM_001359811 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-12 chr7 81420716 81421097 + 0.305855887145851 NA intron (NM_001252525, intron 2 of 11) intron (NM_001252525, intron 2 of 11) 33852 NM_001252525 12877 Mm.273122 NM_007755 ENSMUSG00000025586 Cpeb1 AU024112|Cpe-bp1|Cpeb|mCPEB|mCpeb-1 cytoplasmic polyadenylation element binding protein 1 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-8 chr4 130104882 130105156 + 0.305855887145851 NA Intergenic Intergenic -2537 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-15 chr9 123717171 123717409 + 0.305855887145851 NA intron (NM_033322, intron 1 of 9) intron (NM_033322, intron 1 of 9) 335 NM_033322 93730 Mm.378263 NM_033322 ENSMUSG00000025245 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545 leucine zipper transcription factor-like 1 protein-coding unique_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851 chr17 49428372 49428681 + 0.305855887145851 NA exon (NM_028464, exon 1 of 11) exon (NM_028464, exon 1 of 11) 162 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-8 chr19 44562913 44563134 + 0.305855887145851 NA exon (NM_176958, exon 1 of 8) exon (NM_176958, exon 1 of 8) 169 NM_176958 319594 Mm.145278 NM_176958 ENSMUSG00000036450 Hif1an 2310046M24Rik|A830014H24Rik|FIH|FIH1 hypoxia-inducible factor 1, alpha subunit inhibitor protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-11 chr8 40962803 40963037 + 0.305855887145851 NA intron (NM_026840, intron 2 of 5) intron (NM_026840, intron 2 of 5) 36687 NM_026840 68797 Mm.284246 NM_026840 ENSMUSG00000031595 Pdgfrl 1110039P19Rik|AV013190 platelet-derived growth factor receptor-like protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-5 chr6 42513265 42513485 + 0.305855887145851 NA Intergenic Intergenic 25645 NM_001081301 546896 Mm.439626 NM_001081301 ENSMUSG00000071494 Olfr455 EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1 olfactory receptor 455 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-2 chr10 67099052 67099415 + 0.305855887145851 NA Intergenic Intergenic -2245 NM_178606 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding unique_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-4 chr4 135405738 135406082 + 0.305855887145851 NA Intergenic Intergenic -7683 NM_145555 230822 Mm.35548 NM_145555 ENSMUSG00000043924 Ncmap A330049M08Rik|AA545175|Mp11 noncompact myelin associated protein protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-4 chr12 26339522 26339935 + 0.305855887145851 NA intron (NM_080563, intron 2 of 8) intron (NM_080563, intron 2 of 8) -6982 NR_130981 75243 Mm.444753 NR_130981 ENSMUSG00000114048 4930549C15Rik - RIKEN cDNA 4930549C15 gene ncRNA unique_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851 chr13 63254262 63254859 + 0.305855887145851 NA intron (NM_001289926, intron 13 of 15) intron (NM_001289926, intron 13 of 15) 14531 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-11 chr5 100608884 100609292 + 0.305855887145851 NA Intergenic Intergenic -36883 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding unique_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851 chr11 60728415 60728896 + 0.305855887145851 NA promoter-TSS (NR_039559) promoter-TSS (NR_039559) -8 NR_039559 100628625 NR_039559 ENSMUSG00000092734 Mir5100 mir-5100|mmu-mir-5100|mu-mir-5100 microRNA 5100 ncRNA common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-10 chr6 5443313 5443630 + 0.305855887145851 NA Intergenic Intergenic 52807 NM_013743 27273 Mm.235547 NM_013743 ENSMUSG00000019577 Pdk4 AV005916 pyruvate dehydrogenase kinase, isoenzyme 4 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-7 chr4 107603342 107603743 + 0.305855887145851 NA intron (NM_147221, intron 4 of 10) intron (NM_147221, intron 4 of 10) 80047 NR_151717 56296 Mm.141324 NM_019872 ENSMUSG00000028610 Dmrtb1 Dmrt6|Prp13 DMRT-like family B with proline-rich C-terminal, 1 protein-coding common_peak1_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-8 chr9 58296272 58296693 + 0.305855887145851 NA intron (NM_010729, intron 2 of 6) intron (NM_010729, intron 2 of 6) 16730 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-6 chr2 152951346 152951783 + 0.305855887145851 NA promoter-TSS (NM_145744) promoter-TSS (NM_145744) 18 NM_001159376 252864 Mm.330671 NM_145744 ENSMUSG00000042662 Dusp15 AI851682|LMW-DSP10|T-DSP10 dual specificity phosphatase-like 15 protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-2 chr14 43247347 43247676 + 0.305855887145851 NA Intergenic Intergenic 100300 NM_027940 71826 Mm.335855 NM_027940 ENSMUSG00000095384 1700001F09Rik Gm10377 RIKEN cDNA 1700001F09 gene protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-13 chr6 86365680 86366058 + 0.305855887145851 NA intron (NM_025591, intron 1 of 2) CpG 186 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding common_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-3 chr16 30389056 30389377 + 0.305855887145851 NA promoter-TSS (NM_001128094) promoter-TSS (NM_001128094) -686 NM_001128096 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding common_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-14 chr7 94153659 94154146 + 0.305855887145851 NA Intergenic Intergenic -969726 NM_001358087 100040298 Mm.260904 NM_001358087 Gm15501 EyeLinc5 predicted pseudogene 15501 protein-coding common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-9 chr3 52342907 52343238 + 0.305855887145851 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 74735 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding unique_peak1_26_23_-0.105360670247753_4.53228216559728_0.305855887145851 chr8 11256964 11257379 + 0.305855887145851 NA intron (NM_009931, intron 2 of 51) intron (NM_009931, intron 2 of 51) -55634 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding unique_peak2_27_22_0.00813713773491198_4.52763052492447_0.305855887145851-2 chr2 117728880 117729340 + 0.305855887145851 NA Intergenic Intergenic 83692 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_26_23_-0.105360670247753_4.53228216559728_0.305855887145851-10 chr5 34949710 34949994 + 0.305855887145851 NA intron (NM_173402, intron 1 of 16) CpG 404 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_110_89_0.0128882673819781_6.49829723002066_0.305855589202214 chr10 40257145 40258191 + 0.305855589202214 NA promoter-TSS (NM_026113) promoter-TSS (NM_026113) 44 NM_001359491 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding common_peak2_110_89_0.0128882673819781_6.49829723002066_0.305855589202214-2 chr8 84664342 84665714 + 0.305855589202214 NA Intergenic Intergenic -2176 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_108_91_-0.044867070928567_6.50112842059273_0.305855589202214 chr13 119428945 119429652 + 0.305855589202214 NA intron (NM_145457, intron 1 of 10) CpG 396 NM_145457 218693 Mm.490243 NM_145457 ENSMUSG00000025451 Paip1 PAIP-1 polyadenylate binding protein-interacting protein 1 protein-coding common_peak1_112_90_0.0225280614615553_6.51905867092947_0.305802558555324 chr18 32067739 32068612 + 0.305802558555324 NA intron (NM_173441, intron 1 of 13) CpG 441 NM_173441 73473 Mm.66853 NM_173441 ENSMUSG00000024384 Iws1 1700069O15Rik|3000008H23|AL117927|AW214353 IWS1, SUPT6 interacting protein protein-coding common_peak2_111_90_0.00979449444673985_6.51269188742207_0.305802558555324 chr7 100978877 100980038 + 0.305802558555324 NA Intergenic Intergenic -15091 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak1_111_90_0.00979449444673985_6.51269188742207_0.305802558555324 chr3 137867343 137868682 + 0.305802558555324 NA exon (NM_001033155, exon 1 of 8) exon (NM_001033155, exon 1 of 8) 337 NM_001033155 70604 Mm.256488 NM_001033155 ENSMUSG00000074212 Dnajb14 5730496F10Rik DnaJ heat shock protein family (Hsp40) member B14 protein-coding common_peak2_109_92_-0.0473814893303368_6.51546806644286_0.3058025585553 chr1 80339601 80340678 + 0.3058025585553 NA intron (NM_016716, intron 1 of 15) intron (NM_016716, intron 1 of 15) 551 NM_001313728 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_255_205_0.0153195987416002_7.69416032655402_0.305762059478591 chr16 10990947 10993088 + 0.305762059478591 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 1104 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_110_93_-0.0498474879659847_6.52966510769465_0.305750680817275 chr9 67136594 67137754 + 0.305750680817275 NA intron (NR_045748, intron 1 of 2) intron (NR_045748, intron 1 of 2) 3613 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA common_peak1_257_207_0.0125284551493063_7.70670394571574_0.305716667192184 chr4 63048030 63050379 + 0.305716667192184 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 83630 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_114_92_0.0162964098688576_6.54730701604246_0.305699918794811 chr4 88936833 88938151 + 0.305699918794811 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 4550 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak1_111_94_-0.0522664736855116_6.54372237148819_0.305699918794761 chr2 90579620 90581005 + 0.305699918794761 NA exon (NM_008982, exon 1 of 24) exon (NM_008982, exon 1 of 24) 335 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_111_94_-0.0522664736855116_6.54372237148819_0.305699918794761 chr17 35163897 35164786 + 0.305699918794761 NA intron (NM_001199044, intron 1 of 30) intron (NM_001199044, intron 1 of 30) 536 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak2_111_94_-0.0522664736855116_6.54372237148819_0.305699918794761-2 chr7 4811551 4812668 + 0.305699918794761 NA intron (NM_133777, intron 1 of 3) CpG 231 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-2 chr11 35973300 35973908 + 0.305650498375555 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 6485 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-12 chr8 24976102 24976478 + 0.305650498375555 NA intron (NM_001270996, intron 14 of 21) (TG)n|Simple_repeat|Simple_repeat -27486 NM_153397 353188 Mm.269223 NM_153397 ENSMUSG00000037437 Adam32 - a disintegrin and metallopeptidase domain 32 protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-3 chr11 88203770 88204193 + 0.305650498375555 NA promoter-TSS (NR_111902) promoter-TSS (NR_111902) -407 NM_024174 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-3 chr1 151062004 151062346 + 0.305650498375555 NA Intergenic Intergenic -68740 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding unique_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555 chr15 78529892 78530488 + 0.305650498375555 NA promoter-TSS (NM_028331) promoter-TSS (NM_028331) -539 NM_028331 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-9 chr7 49600030 49600512 + 0.305650498375555 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 36564 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding unique_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-2 chrX 7721749 7722187 + 0.305650498375555 NA promoter-TSS (NM_001290792) promoter-TSS (NM_001290792) -252 NM_172372 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-8 chr13 104109799 104110478 + 0.305650498375555 NA promoter-TSS (NM_029447) promoter-TSS (NM_029447) 397 NM_144838 218544 Mm.44416 NM_144838 ENSMUSG00000042743 Sgtb C630001O05Rik small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555 chr1 138347986 138348459 + 0.305650498375555 NA Intergenic Intergenic 74484 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-12 chr8 31302083 31302329 + 0.305650498375555 NA Intergenic Intergenic -65543 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-9 chr16 18498417 18498705 + 0.305650498375555 NA promoter-TSS (NM_023120) promoter-TSS (NM_023120) -152 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-3 chr11 117259342 117259676 + 0.305650498375555 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -6737 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-13 chr8 126838368 126838558 + 0.305650498375555 NA Intergenic Intergenic -10557 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-11 chr7 144042942 144043418 + 0.305650498375555 NA Intergenic Intergenic 33926 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-2 chr17 79020651 79021022 + 0.305650498375555 NA promoter-TSS (NM_029239) promoter-TSS (NM_029239) -20 NM_029239 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-8 chr6 140620351 140620690 + 0.305650498375555 NA Intergenic Intergenic -2143 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-8 chr9 21332607 21332997 + 0.305650498375555 NA intron (NM_001359227, intron 1 of 22) intron (NM_001359227, intron 1 of 22) -5026 NM_152808 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-6 chr12 108894343 108894597 + 0.305650498375555 NA promoter-TSS (NM_001164314) promoter-TSS (NM_001164314) 198 NM_177602 212198 Mm.342082 NM_177602 ENSMUSG00000040877 Wdr25 B930090D16Rik WD repeat domain 25 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-10 chr2 117655335 117655999 + 0.305650498375555 NA Intergenic Intergenic 157135 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-2 chr11 80141917 80142112 + 0.305650498375555 NA intron (NM_183275, intron 1 of 3) intron (NM_183275, intron 1 of 3) 139 NM_183275 68550 Mm.18466 NM_183275 ENSMUSG00000046909 Tefm 1110002N22Rik transcription elongation factor, mitochondrial protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-4 chr2 91182754 91183249 + 0.305650498375555 NA promoter-TSS (NM_145527) promoter-TSS (NM_145527) 46 NM_001177719 228355 Mm.36410 NM_145527 ENSMUSG00000040687 Madd 9630059K23Rik|IG20 MAP-kinase activating death domain protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-3 chr19 4228035 4228320 + 0.305650498375555 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) -3716 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-7 chr6 42691730 42692111 + 0.305650498375555 NA intron (NM_001355769, intron 1 of 8) intron (NM_001355769, intron 1 of 8) 1180 NM_029930 77574 Mm.24652 NM_029930 ENSMUSG00000036667 Tcaf1 2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a TRPM8 channel-associated factor 1 protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-10 chr7 128459858 128460209 + 0.305650498375555 NA intron (NM_001347641, intron 1 of 12) intron (NM_001347641, intron 1 of 12) 1480 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-12 chr9 71689902 71690395 + 0.305650498375555 NA intron (NM_001304362, intron 8 of 18) intron (NM_001304362, intron 8 of 18) 81454 NM_026599 68178 Mm.99961 NM_026599 ENSMUSG00000032232 Cgnl1 4933421H10Rik|9930020M10Rik|AI503810|Jacop cingulin-like 1 protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555 chr10 78184763 78185043 + 0.305650498375555 NA intron (NM_029546, intron 1 of 20) intron (NM_029546, intron 1 of 20) 246 NM_029546 110816 Mm.103522 NM_029546 ENSMUSG00000032834 Pwp2 6530411D08Rik|Pwp2h|wdp103 PWP2 periodic tryptophan protein homolog (yeast) protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-9 chr7 142470481 142470750 + 0.305650498375555 NA intron (NM_001136071, intron 1 of 10) intron (NM_001136071, intron 1 of 10) -1228 NM_001271508 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-5 chr5 24601530 24601946 + 0.305650498375555 NA intron (NM_025891, intron 1 of 12) CpG 264 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-6 chr3 135659582 135659839 + 0.305650498375555 NA intron (NM_008689, intron 4 of 24) intron (NM_008689, intron 4 of 24) 31837 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555 chr11 48873121 48873757 + 0.305650498375555 NA Intergenic Intergenic -2019 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm immunity-related GTPase family M member 1 protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-5 chr3 144669705 144669967 + 0.305650498375555 NA Intergenic Intergenic 50499 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding unique_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555 chr1 179969864 179970447 + 0.305650498375555 NA intron (NR_153194, intron 1 of 35) intron (NR_153194, intron 1 of 35) 9066 NM_001033285 226751 Mm.259655 NM_001033285 ENSMUSG00000026490 Cdc42bpa A930014J19Rik|DMPK-like CDC42 binding protein kinase alpha protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-11 chr3 129878623 129878951 + 0.305650498375555 NA exon (NM_023196, exon 1 of 4) exon (NM_023196, exon 1 of 4) 181 NM_023196 66350 Mm.151951 NM_023196 ENSMUSG00000027999 Pla2g12a 2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1 phospholipase A2, group XIIA protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-13 chr9 114390280 114390585 + 0.305650498375555 NA exon (NM_019922, exon 1 of 7) exon (NM_019922, exon 1 of 7) 280 NM_019922 56693 Mm.20904 NM_019922 ENSMUSG00000032431 Crtap 5730529N23Rik|CASP|Leprel3|P3h5 cartilage associated protein protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-7 chr6 33869769 33870216 + 0.305650498375555 NA intron (NM_009148, intron 14 of 17) intron (NM_009148, intron 14 of 17) -159456 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-6 chr5 48372364 48372643 + 0.305650498375555 NA intron (NM_025755, intron 1 of 8) CpG 111 NM_025755 66768 Mm.29409 NM_025755 ENSMUSG00000029089 Pacrgl 4933428G09Rik PARK2 co-regulated-like protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-10 chr8 24395926 24396284 + 0.305650498375555 NA Intergenic Intergenic 42841 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-4 chr13 58274326 58274716 + 0.305650498375555 NA promoter-TSS (NM_019832) promoter-TSS (NM_019832) -333 NM_019832 56278 Mm.296625 NM_019832 ENSMUSG00000021552 Gkap1 42kDa|4933400B15Rik|D13Ertd340e|Gkap42 G kinase anchoring protein 1 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-4 chr10 7212271 7212587 + 0.305650498375555 NA promoter-TSS (NM_172546) promoter-TSS (NM_172546) -192 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-9 chrX 9662264 9662861 + 0.305650498375555 NA intron (NM_025975, intron 1 of 4) intron (NM_025975, intron 1 of 4) 421 NM_025975 67117 Mm.29150 NM_025975 ENSMUSG00000031176 Dynlt3 2310075M16Rik|AU042796|Tcte1l dynein light chain Tctex-type 3 protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-7 chr6 114458572 114458901 + 0.305650498375555 NA intron (NM_001317124, intron 1 of 1) intron (NM_001317124, intron 1 of 1) 214 NM_001317124 15465 Mm.333327 NM_008285 ENSMUSG00000053004 Hrh1 Bphs|H1R|HH1R|Hir histamine receptor H1 protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-4 chr16 18234668 18235043 + 0.305650498375555 NA intron (NM_172151, intron 1 of 10) CpG 281 NM_172151 27801 Mm.326263 NM_172151 ENSMUSG00000060166 Zdhhc8 D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1 zinc finger, DHHC domain containing 8 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555 chr1 58676958 58677598 + 0.305650498375555 NA intron (NM_001347056, intron 5 of 13) intron (NM_001347056, intron 5 of 13) 15167 NM_001347056 108812 Mm.442063 NM_175370 ENSMUSG00000047528 Als2cr12 4933405P16Rik|4933425F06Rik amyotrophic lateral sclerosis 2 chromosome region 12 protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-11 chr8 71668376 71668675 + 0.305650498375555 NA intron (NM_001029873, intron 1 of 41) intron (NM_001029873, intron 1 of 41) 3232 NM_001029873 382018 Mm.334606 NM_001029873 ENSMUSG00000034799 Unc13a 2410078G03Rik|Munc13-1 unc-13 homolog A (C. elegans) protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-5 chr11 68387164 68387524 + 0.305650498375555 NA promoter-TSS (NM_008744) promoter-TSS (NM_008744) -518 NM_008744 18208 Mm.39095 NM_008744 ENSMUSG00000020902 Ntn1 AI561871|BC019633|Netrin-1 netrin 1 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-2 chr1 135813550 135813941 + 0.305650498375555 NA Intergenic Intergenic -4853 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding common_peak2_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-8 chr6 121086218 121086674 + 0.305650498375555 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -4819 NR_138097 194401 Mm.122399 NM_153396 ENSMUSG00000051586 Mical3 C130040D16Rik|Mical-3|mKIAA1364 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding common_peak1_28_23_-0.00299449977064548_4.58346525083583_0.305650498375555-6 chr6 17545628 17546054 + 0.305650498375555 NA intron (NM_008591, intron 12 of 21) intron (NM_008591, intron 12 of 21) 81884 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak2_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-5 chr2 152674531 152675261 + 0.305650498375555 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 5435 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak1_27_24_-0.112157095982799_4.58777764178332_0.305650498375555-7 chr13 69586635 69587054 + 0.305650498375555 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 24619 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak1_113_95_-0.0420184235217995_6.56395328896026_0.30565023687716 chr19 3851860 3852882 + 0.30565023687716 NA exon (NM_013490, exon 1 of 11) exon (NM_013490, exon 1 of 11) 598 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_115_93_0.0132691901263842_6.56122344674083_0.30565023687711 chr1 46853713 46854930 + 0.30565023687711 NA promoter-TSS (NM_172653) promoter-TSS (NM_172653) -703 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|Zip10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak2_115_93_0.0132691901263842_6.56122344674083_0.30565023687711-2 chr15 78807327 78809178 + 0.30565023687711 NA Intergenic Intergenic -5210 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding common_peak1_114_96_-0.0444576212102392_6.57768403158201_0.305601600953162 chr2 28839424 28840624 + 0.305601600953162 NA promoter-TSS (NM_001033294) promoter-TSS (NM_001033294) 336 NM_172977 269252 Mm.26043 NM_172977 ENSMUSG00000035666 Gtf3c4 5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90 general transcription factor IIIC, polypeptide 4 protein-coding common_peak1_117_94_0.0224904974184872_6.58110085704019_0.305601600953138 chr2 121413252 121414846 + 0.305601600953138 NA promoter-TSS (NM_153075) promoter-TSS (NM_153075) 147 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding common_peak1_116_94_0.0102987910058303_6.57500500383386_0.305601600953138 chr2 164878952 164879800 + 0.305601600953138 NA promoter-TSS (NM_146129) promoter-TSS (NM_146129) 8 NM_146129 228866 Mm.241134 NM_146129 ENSMUSG00000039849 Pcif1 2310022K11Rik|C20orf67|F730014I05Rik PDX1 C-terminal inhibiting factor 1 protein-coding common_peak2_116_94_0.0102987910058303_6.57500500383386_0.305601600953138 chr12 111449597 111450970 + 0.305601600953138 NA intron (NM_009396, intron 8 of 11) intron (NM_009396, intron 8 of 11) 7622 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_117_94_0.0224904974184872_6.58110085704019_0.305601600953138-2 chr4 126103511 126104544 + 0.305601600953138 NA promoter-TSS (NM_001145827) promoter-TSS (NM_001145827) 70 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak1_467_383_-0.0189180605308668_8.57550347045572_0.305589538723844 chr8 47988772 47992296 + 0.305589538723844 NA promoter-TSS (NM_133791) promoter-TSS (NM_133791) 17 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_472_379_0.0114123211112602_8.57556176888658_0.305589538723844 chr19 28676988 28680219 + 0.305589538723844 NA intron (NR_045330, intron 1 of 4) intron (NR_045330, intron 1 of 4) 379 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_115_97_-0.0468518023111866_6.59128394295962_0.30555397833316 chr5 103759488 103760981 + 0.30555397833316 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 5661 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_115_97_-0.0468518023111866_6.59128394295962_0.30555397833316 chr2 167688669 167689722 + 0.30555397833316 NA exon (NM_009883, exon 1 of 1) exon (NM_009883, exon 1 of 1) 280 NM_001287738 12608 Mm.439656 NM_009883 ENSMUSG00000056501 Cebpb C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6 CCAAT/enhancer binding protein (C/EBP), beta protein-coding common_peak1_118_95_0.0194724266161819_6.59469871402925_0.305553978333135 chr11 115954349 115955793 + 0.305553978333135 NA intron (NM_020483, intron 4 of 10) intron (NM_020483, intron 4 of 10) -19654 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_118_95_0.0194724266161819_6.59469871402925_0.305553978333135-2 chr13 100730225 100730866 + 0.305553978333135 NA intron (NM_009874, intron 1 of 11) intron (NM_009874, intron 1 of 11) 397 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding common_peak2_119_96_0.0165097438655133_6.60816771411988_0.305507337675529 chr18 5592177 5593372 + 0.305507337675529 NA promoter-TSS (NR_033552) promoter-TSS (NR_033552) 127 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding common_peak1_119_96_0.0165097438655133_6.60816771411988_0.305507337675529 chr3 53041032 53042327 + 0.305507337675529 NA 5' UTR (NM_175386, exon 1 of 4) 5' UTR (NM_175386, exon 1 of 4) 132 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak1_117_98_-0.0370105143301744_6.61085136291452_0.305507337675529 chr5 148398853 148399786 + 0.305507337675529 NA intron (NM_007513, intron 1 of 12) CpG 585 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_117_98_-0.0370105143301744_6.61085136291452_0.305507337675529-2 chr7 145105350 145106590 + 0.305507337675529 NA Intergenic Intergenic 102149 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_116_98_-0.0492022207428313_6.60475550970819_0.305507337675529 chr17 33684508 33685416 + 0.305507337675529 NA TTS (NM_145486) TTS (NM_145486) 496 NM_001109913 76936 Mm.311439 NM_029804 ENSMUSG00000059208 Hnrnpm 2610023M21Rik|AA409009|Hnrpm|mKIAA4193 heterogeneous nuclear ribonucleoprotein M protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-13 chr4 132274018 132274271 + 0.305461879681376 NA promoter-TSS (NM_025579) promoter-TSS (NM_025579) -231 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-14 chr18 32147256 32147792 + 0.305461879681376 NA Intergenic Intergenic -7954 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-6 chr18 49755298 49755585 + 0.305461879681376 NA exon (NM_001170960, exon 1 of 4) exon (NM_001170960, exon 1 of 4) 160 NM_001170960 68857 Mm.96010 NM_026854 ENSMUSG00000024505 Dtwd2 1190002H09Rik|8030470C17Rik|AI414673|BB115449 DTW domain containing 2 protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-2 chr11 119685938 119686378 + 0.305461879681376 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 83253 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-16 chr18 44380697 44381007 + 0.305461879681376 NA intron (NM_027490, intron 1 of 10) CpG 352 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding unique_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376 chr1 43140277 43140865 + 0.305461879681376 NA intron (NM_010212, intron 3 of 5) B1_Mus2|SINE|Alu 23390 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-5 chr2 60209111 60209647 + 0.305461879681376 NA promoter-TSS (NM_020575) promoter-TSS (NM_020575) -557 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-21 chr9 58315450 58315951 + 0.305461879681376 NA Intergenic B4|SINE|B4 -2488 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-6 chr11 120086417 120086807 + 0.305461879681376 NA intron (NM_009734, intron 1 of 25) CpG 215 NM_009734 12009 Mm.2556 NM_009734 ENSMUSG00000039781 Cep131 AZ1|Azi|Azi1 centrosomal protein 131 protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-7 chr4 152086964 152087458 + 0.305461879681376 NA intron (NR_104381, intron 1 of 21) intron (NR_104381, intron 1 of 21) 348 NR_104381 269608 Mm.332102 NM_001004156 ENSMUSG00000039713 Plekhg5 BC023181|Syx pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-19 chr5 103736083 103736672 + 0.305461879681376 NA Intergenic Intergenic -17785 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-7 chr13 40916328 40916825 + 0.305461879681376 NA intron (NM_008105, intron 1 of 2) intron (NM_008105, intron 1 of 2) -1058 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376 chr10 17722484 17722868 + 0.305461879681376 NA promoter-TSS (NM_010828) promoter-TSS (NM_010828) -552 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-4 chr16 62786442 62786645 + 0.305461879681376 NA intron (NM_178925, intron 1 of 5) CpG 173 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-2 chr10 59902427 59902975 + 0.305461879681376 NA Intergenic Intergenic 23110 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-5 chr11 103141653 103142070 + 0.305461879681376 NA Intergenic Intergenic 8502 NM_027658 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding unique_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-2 chr19 28645969 28646233 + 0.305461879681376 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -32123 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-3 chr13 112927879 112928270 + 0.305461879681376 NA promoter-TSS (NM_028151) promoter-TSS (NM_028151) 281 NM_172594 218629 Mm.35094 NM_172594 ENSMUSG00000042426 Dhx29 3732415M03|AU043276|Ddxx|E130202M19Rik DEAH (Asp-Glu-Ala-His) box polypeptide 29 protein-coding unique_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-3 chr4 125085198 125085634 + 0.305461879681376 NA intron (NR_151472, intron 1 of 7) CpG 282 NR_151472 70088 Mm.291214 NM_027310 ENSMUSG00000028863 Meaf6 2310005N01Rik|2810036M01Rik MYST/Esa1-associated factor 6 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-8 chr13 43303884 43304140 + 0.305461879681376 NA 5' UTR (NM_001033399, exon 1 of 2) 5' UTR (NM_001033399, exon 1 of 2) 160 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-12 chr16 23498041 23498453 + 0.305461879681376 NA intron (NM_001359083, intron 2 of 10) intron (NM_001359083, intron 2 of 10) 22568 NM_008555 17174 Mm.1213 NM_008555 ENSMUSG00000022887 Masp1 AW048060|CCPII|Crarf|Masp1/3 mannan-binding lectin serine peptidase 1 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-4 chr11 76470005 76470287 + 0.305461879681376 NA intron (NM_001346670, intron 4 of 21) intron (NM_001346670, intron 4 of 21) -1681 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-16 chr6 127993948 127994432 + 0.305461879681376 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 106568 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-11 chr4 89293322 89293866 + 0.305461879681376 NA intron (NM_009877, intron 1 of 2) intron (NM_009877, intron 1 of 2) 1025 NM_009877 12578 Mm.4733 NM_009877 ENSMUSG00000044303 Cdkn2a ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19|p19ARF cyclin dependent kinase inhibitor 2A protein-coding unique_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376 chr15 77152315 77152601 + 0.305461879681376 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 1354 NM_001110830 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-20 chr8 88282902 88283356 + 0.305461879681376 NA intron (NM_001109756, intron 1 of 27) intron (NM_001109756, intron 1 of 27) 137 NM_001109756 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding unique_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-2 chr15 103383228 103383882 + 0.305461879681376 NA Intergenic Intergenic -16764 NM_001314041 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-8 chr6 47559722 47560261 + 0.305461879681376 NA intron (NM_001146689, intron 3 of 19) intron (NM_001146689, intron 3 of 19) 35039 NM_001146689 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-14 chr4 139967741 139968241 + 0.305461879681376 NA promoter-TSS (NM_173427) promoter-TSS (NM_173427) 35 NM_173427 242721 Mm.60400 NM_173427 ENSMUSG00000078234 Klhdc7a B230308G19Rik kelch domain containing 7A protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-15 chr18 36525354 36525636 + 0.305461879681376 NA Intergenic Intergenic -2657 NM_172830 240215 Mm.135463 NM_172830 ENSMUSG00000024485 Slc4a9 AE4|D630003B07|D630024F24Rik solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-5 chr17 75803955 75804380 + 0.305461879681376 NA Intergenic Intergenic -56856 NR_033456 100043885 Mm.127562 NR_033456 Gm4710 - predicted gene 4710 ncRNA common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-17 chr19 6840317 6840524 + 0.305461879681376 NA intron (NM_019924, intron 1 of 17) CpG-7287 207 NM_019924 56613 Mm.20914 NM_019924 ENSMUSG00000024952 Rps6ka4 1110069D02Rik|90kDa|AI848992|Msk2|mMSK2 ribosomal protein S6 kinase, polypeptide 4 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-10 chr14 32085958 32086255 + 0.305461879681376 NA promoter-TSS (NR_104305) promoter-TSS (NR_104305) 378 NM_145460 218885 Mm.202257 NM_145460 ENSMUSG00000021906 Oxnad1 2410002F01Rik|AW492292|BC019806 oxidoreductase NAD-binding domain containing 1 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-9 chr13 70803983 70804423 + 0.305461879681376 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 37608 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376 chr1 138617467 138617792 + 0.305461879681376 NA intron (NM_021605, intron 1 of 9) intron (NM_021605, intron 1 of 9) 2128 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-17 chr6 131292726 131293206 + 0.305461879681376 NA intron (NM_001327860, intron 1 of 5) (CA)n|Simple_repeat|Simple_repeat 278 NM_001327860 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-6 chr3 79977354 79977603 + 0.305461879681376 NA Intergenic Intergenic 91548 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-3 chr8 83874925 83875452 + 0.305461879681376 NA Intergenic CpG -24910 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-18 chr7 44304281 44304618 + 0.305461879681376 NA 3' UTR (NM_009131, exon 4 of 4) 3' UTR (NM_009131, exon 4 of 4) 2510 NM_009131 20256 Mm.20428 NM_009131 ENSMUSG00000004473 Clec11a AW457320|Clecsf3|Scgf C-type lectin domain family 11, member a protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-9 chr6 100825609 100826094 + 0.305461879681376 NA Intergenic Intergenic -7787 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-4 chr14 61648925 61649311 + 0.305461879681376 NA intron (NR_028264, intron 1 of 6) CpG -17008 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-12 chr4 109665612 109666110 + 0.305461879681376 NA promoter-TSS (NM_007671) promoter-TSS (NM_007671) -489 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-20 chr8 64523729 64524089 + 0.305461879681376 NA Intergenic Intergenic -9468 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-3 chr11 70196667 70197082 + 0.305461879681376 NA Intergenic Intergenic -17036 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-2 chr1 151338684 151339046 + 0.305461879681376 NA Intergenic Intergenic -5621 NM_001359262 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-6 chr3 89730721 89731049 + 0.305461879681376 NA intron (NM_001146296, intron 1 of 14) intron (NM_001146296, intron 1 of 14) 167 NM_019655 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|DRADA|mZaADAR adenosine deaminase, RNA-specific protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-19 chr8 27059457 27059822 + 0.305461879681376 NA Intergenic Intergenic 17084 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Plpbp 1700024N20Rik|2200002F22Rik|Prosc pyridoxal phosphate binding protein protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-3 chr15 13287966 13288361 + 0.305461879681376 NA Intergenic Intergenic -114488 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-13 chr18 12973491 12973924 + 0.305461879681376 NA promoter-TSS (NM_001357396) promoter-TSS (NM_001357396) -753 NM_001357396 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-21 chr9 44361336 44361572 + 0.305461879681376 NA exon (NM_027889, exon 1 of 16) exon (NM_027889, exon 1 of 16) 216 NM_001357393 71732 Mm.295013 NM_027889 ENSMUSG00000032127 Vps11 1200011A11Rik VPS11, CORVET/HOPS core subunit protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-15 chr6 113166621 113167089 + 0.305461879681376 NA Intergenic Intergenic 28529 NM_177763 269788 Mm.37943 NM_177763 ENSMUSG00000042873 Lhfpl4 1190004M23Rik|AI604880|B230384L07|mKIAA4027 lipoma HMGIC fusion partner-like protein 4 protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-7 chr5 149322006 149322312 + 0.305461879681376 NA Intergenic Intergenic 57155 NM_009663 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-10 chr6 108708736 108709272 + 0.305461879681376 NA Intergenic Intergenic -48070 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-9 chr3 144980980 144981376 + 0.305461879681376 NA Intergenic Intergenic -6133 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376 chr1 43221182 43221630 + 0.305461879681376 NA Intergenic Intergenic -24645 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376 chr1 75236528 75236779 + 0.305461879681376 NA promoter-TSS (NM_001159885) promoter-TSS (NM_001159885) -49 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-18 chr4 84115076 84115581 + 0.305461879681376 NA Intergenic MLT1J|LTR|ERVL-MaLR -70449 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-22 chr9 52167952 52168293 + 0.305461879681376 NA promoter-TSS (NM_001162921) promoter-TSS (NM_001162921) -11 NM_001162921 244871 Mm.295686 NM_001162921 ENSMUSG00000035164 Zc3h12c A230108E06|C230027N18Rik|mKIAA1726 zinc finger CCCH type containing 12C protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-2 chr10 80115143 80115450 + 0.305461879681376 NA promoter-TSS (NM_011492) promoter-TSS (NM_011492) -507 NM_001301853 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-8 chr3 68609753 68610060 + 0.305461879681376 NA intron (NM_001113421, intron 3 of 7) intron (NM_001113421, intron 3 of 7) 37538 NM_013928 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-5 chr19 28389492 28389754 + 0.305461879681376 NA intron (NM_175459, intron 4 of 10) intron (NM_175459, intron 4 of 10) -288601 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-11 chr14 40966467 40966834 + 0.305461879681376 NA intron (NM_145928, intron 1 of 8) CpG 246 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-11 chr8 124722265 124722530 + 0.305461879681376 NA promoter-TSS (NM_001357355) promoter-TSS (NM_001357355) 258 NM_026855 68865 Mm.22779 NM_026855 ENSMUSG00000031982 Arv1 1110067L22Rik|AI461928|AW121084 ARV1 homolog, fatty acid homeostasis modulator protein-coding unique_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376 chr17 6814164 6814735 + 0.305461879681376 NA Intergenic Intergenic -31669 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-7 chr2 164497272 164497798 + 0.305461879681376 NA promoter-TSS (NM_133779) promoter-TSS (NM_133779) 10 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-4 chr15 79774801 79775043 + 0.305461879681376 NA promoter-TSS (NM_017470) promoter-TSS (NM_017470) -455 NM_017470 54152 Mm.288159 NM_017470 ENSMUSG00000022420 Dnal4 D15Ertd424e|Dnalc4 dynein, axonemal, light chain 4 protein-coding common_peak1_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-8 chr5 90757795 90758270 + 0.305461879681376 NA Intergenic Intergenic -1266 NM_009141 20311 Mm.4660 NM_009141 ENSMUSG00000029371 Cxcl5 AMCF-II|Cxcl6|ENA-78|GCP-2|LIX|Scyb5|Scyb6 chemokine (C-X-C motif) ligand 5 protein-coding common_peak2_29_24_-0.0133236445755953_4.63719436748693_0.305461879681376-10 chr4 62965857 62966120 + 0.305461879681376 NA intron (NM_028326, intron 1 of 14) intron (NM_028326, intron 1 of 14) 414 NM_028326 72701 Mm.26479 NM_028326 ENSMUSG00000028358 Zfp618 2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1 zinc finger protein 618 protein-coding common_peak2_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-3 chr1 177795101 177795513 + 0.305461879681376 NA intron (NM_007422, intron 1 of 12) intron (NM_007422, intron 1 of 12) 1202 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding unique_peak1_28_25_-0.118471717190581_4.6412038595458_0.305461879681376-2 chr4 109661251 109661907 + 0.305461879681376 NA exon (NM_001301368, exon 3 of 3) exon (NM_001301368, exon 3 of 3) 3793 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin dependent kinase inhibitor 2C protein-coding common_peak2_120_97_0.0136009168611162_6.62151030254577_0.305461648918236 chr12 80364996 80366097 + 0.305461648918236 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 26131 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak1_120_97_0.0136009168611162_6.62151030254577_0.305461648918236-2 chr8 74993653 74994385 + 0.305461648918236 NA intron (NM_178017, intron 1 of 10) CpG 369 NM_178017 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding common_peak2_120_97_0.0136009168611162_6.62151030254577_0.305461648918236-2 chr19 34255221 34256012 + 0.305461648918236 NA promoter-TSS (NM_007392) promoter-TSS (NM_007392) -243 NM_007392 11475 Mm.213025 NM_007392 ENSMUSG00000035783 Acta2 0610041G09Rik|Actvs|SMAalpha|SMalphaA|a-SMA|alphaSMA actin, alpha 2, smooth muscle, aorta protein-coding common_peak1_120_97_0.0136009168611162_6.62151030254577_0.305461648918236 chr12 59060625 59061669 + 0.305461648918236 NA intron (NM_001306218, intron 1 of 6) CpG 325 NM_001306218 78232 Mm.290070 NM_030057 ENSMUSG00000020993 Trappc6b 5830498C14Rik|C79212 trafficking protein particle complex 6B protein-coding common_peak2_118_99_-0.0394212624373864_6.62414555855603_0.305461648918211 chr3 58371256 58372358 + 0.305461648918211 NA Intergenic Intergenic -42913 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_121_98_0.0107444696500227_6.63472885490462_0.305416883213638 chr11 97362329 97363376 + 0.305416883213638 NA exon (NM_138657, exon 1 of 10) exon (NM_138657, exon 1 of 10) 301 NM_138657 192157 Mm.34339 NM_138657 ENSMUSG00000038485 Socs7 2310063P06Rik|C85125|Nap4 suppressor of cytokine signaling 7 protein-coding common_peak2_119_100_-0.0417888966991535_6.63731703440222_0.305416883213638 chr5 35037779 35038852 + 0.305416883213638 NA Intergenic Intergenic -3194 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak1_120_101_-0.0441145809951706_6.65036805147391_0.305373012868374-2 chr6 49263072 49264172 + 0.305373012868374 NA intron (NM_001362188, intron 1 of 8) CpG 430 NM_001347209 101214 Mm.196598 NM_198102 ENSMUSG00000029817 Tra2a 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1 transformer 2 alpha protein-coding common_peak1_120_101_-0.0441145809951706_6.65036805147391_0.305373012868374 chr11 4263478 4264721 + 0.305373012868374 NA intron (NM_008501, intron 1 of 3) intron (NM_008501, intron 1 of 3) -2697 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_122_99_0.00793898005316862_6.64782567980131_0.305373012868325-2 chr3 151350614 151351658 + 0.305373012868325 NA Intergenic Intergenic -86746 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_122_99_0.00793898005316862_6.64782567980131_0.305373012868325 chr18 10181332 10182133 + 0.305373012868325 NA promoter-TSS (NM_009071) promoter-TSS (NM_009071) 60 NM_009071 19877 Mm.6710 NM_009071 ENSMUSG00000024290 Rock1 1110055K06Rik|Rock-I Rho-associated coiled-coil containing protein kinase 1 protein-coding common_peak1_122_99_0.00793898005316862_6.64782567980131_0.305373012868325 chr19 58104867 58106142 + 0.305373012868325 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 54337 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_123_99_0.0195383702048133_6.65362537487713_0.305373012868325 chr2 167630947 167632004 + 0.305373012868325 NA intron (NM_001311131, intron 1 of 4) CpG 530 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak2_274_227_-0.0285107732064134_7.81863462756153_0.305363342850652 chr8 70775801 70777844 + 0.305363342850652 NA promoter-TSS (NM_008841) promoter-TSS (NM_008841) -40 NR_029440 72093 Mm.271208 NR_029440 2010320M18Rik - RIKEN cDNA 2010320M18 gene ncRNA common_peak2_121_102_-0.0463994374535863_6.66330080845642_0.305330011285694 chr4 155811948 155813039 + 0.305330011285694 NA promoter-TSS (NM_207678) promoter-TSS (NM_207678) 4 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak1_124_100_0.0166892985811486_6.66655613204237_0.305330011285669 chr5 149050681 149052117 + 0.305330011285669 NA 5' UTR (NM_001313894, exon 1 of 5) 5' UTR (NM_001313894, exon 1 of 5) 217 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding unique_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-2 chr8 69920626 69921285 + 0.30528805757448 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -18397 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-9 chr6 29272744 29272972 + 0.30528805757448 NA intron (NM_023516, intron 1 of 1) CpG 232 NM_023516 69573 Mm.45161 NM_023516 ENSMUSG00000043421 Hilpda 2310016C08Rik|AW049004|Hig2 hypoxia inducible lipid droplet associated protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-11 chr7 89679342 89679989 + 0.30528805757448 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 46847 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-4 chr10 67002972 67003303 + 0.30528805757448 NA Intergenic Intergenic -1938 NR_110511 102634101 Mm.445258 NR_110511 ENSMUSG00000112925 Gm31763 - predicted gene, 31763 ncRNA common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-7 chr14 69665716 69666209 + 0.30528805757448 NA intron (NM_033325, intron 5 of 13) intron (NM_033325, intron 5 of 13) -26286 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-8 chr13 31206823 31207388 + 0.30528805757448 NA Intergenic Intergenic 33981 NR_045957 73924 Mm.417825 NR_045957 ENSMUSG00000087460 4930401O12Rik - RIKEN cDNA 4930401O12 gene ncRNA common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-12 chr4 152296538 152296964 + 0.30528805757448 NA promoter-TSS (NR_037908) promoter-TSS (NR_037908) -463 NR_037908 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-4 chr18 24745140 24745430 + 0.30528805757448 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 36662 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-3 chr12 17690913 17691320 + 0.30528805757448 NA intron (NM_016677, intron 1 of 3) CpG 307 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-8 chr4 150374338 150374735 + 0.30528805757448 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 92620 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-6 chr2 144555779 144556102 + 0.30528805757448 NA promoter-TSS (NM_019787) promoter-TSS (NM_019787) -289 NM_001252544 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-14 chr6 15731026 15731554 + 0.30528805757448 NA intron (NM_175088, intron 2 of 4) intron (NM_175088, intron 2 of 4) 10629 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-5 chr2 51290620 51290944 + 0.30528805757448 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 48951 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-11 chr16 55637289 55637741 + 0.30528805757448 NA Intergenic MTEa|LTR|ERVL-MaLR 142784 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-5 chr18 36400091 36400450 + 0.30528805757448 NA Intergenic Intergenic 51646 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448 chr13 16738848 16739256 + 0.30528805757448 NA Intergenic Intergenic -715629 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-3 chr11 4276212 4276679 + 0.30528805757448 NA Intergenic Intergenic 9649 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-13 chr8 109958107 109958375 + 0.30528805757448 NA intron (NM_028584, intron 2 of 2) MIRc|SINE|MIR 3964 NM_212447 73608 Mm.86833 NM_028584 ENSMUSG00000001672 Marveld3 1810006A16Rik|AI642133|Marvd3|Mrvldc3 MARVEL (membrane-associating) domain containing 3 protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-11 chr3 121968821 121969217 + 0.30528805757448 NA intron (NM_001356524, intron 1 of 22) intron (NM_001356524, intron 1 of 22) 1213 NM_001356524 214137 Mm.229287 NM_172525 ENSMUSG00000039831 Arhgap29 6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1 Rho GTPase activating protein 29 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-5 chr18 25168532 25168937 + 0.30528805757448 NA promoter-TSS (NM_001033532) promoter-TSS (NM_001033532) 143 NM_001142698 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-4 chr11 54860885 54861175 + 0.30528805757448 NA promoter-TSS (NM_029327) promoter-TSS (NM_029327) -439 NM_029327 75530 Mm.83578 NM_029327 ENSMUSG00000020268 Lyrm7 1700024C24Rik|9330147L21Rik LYR motif containing 7 protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-9 chr14 43164008 43164484 + 0.30528805757448 NA Intergenic Intergenic -148670 NM_001244671 100042055 Mm.429109 NM_001244671 ENSMUSG00000095226 Gm10377 - predicted gene 10377 protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-6 chr11 43547183 43547668 + 0.30528805757448 NA intron (NM_001045530, intron 2 of 5) B3|SINE|B2 18676 NM_001045530 380694 Mm.247595 NM_001045530 ENSMUSG00000044707 Ccnjl Gm877 cyclin J-like protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-8 chr8 14888598 14888822 + 0.30528805757448 NA 5' UTR (NM_012000, exon 1 of 3) 5' UTR (NM_012000, exon 1 of 3) 174 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-9 chr2 110177064 110177536 + 0.30528805757448 NA Intergenic Intergenic -126821 NR_040508 75517 Mm.363927 NR_040508 ENSMUSG00000086186 Ccdc34os 1700024P03Rik coiled-coil domain containing 34, opposite strand ncRNA unique_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-2 chr7 99407518 99407927 + 0.30528805757448 NA intron (NM_001362166, intron 3 of 18) intron (NM_001362166, intron 3 of 18) 26204 NM_001362166 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-10 chr3 96240551 96241095 + 0.30528805757448 NA promoter-TSS (NM_013549).2 promoter-TSS (NM_013549).2 -449 NM_178212 319192 Mm.5220 NM_178212 ENSMUSG00000063954 Hist2h2aa2 H2a-614|H2a-615 histone cluster 2, H2aa2 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-2 chr13 42346084 42346530 + 0.30528805757448 NA Intergenic Intergenic 44831 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-6 chr2 25540220 25540782 + 0.30528805757448 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 6439 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-5 chr12 8921629 8921861 + 0.30528805757448 NA 5' UTR (NM_008640, exon 1 of 7) 5' UTR (NM_008640, exon 1 of 7) 438 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-2 chr1 163994939 163995381 + 0.30528805757448 NA promoter-TSS (NM_201364) promoter-TSS (NM_201364) 271 NM_001355132 69962 Mm.27284 NM_027279 ENSMUSG00000041396 Mettl18 2810422O20Rik|C78571 methyltransferase like 18 protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-3 chr1 193173677 193174197 + 0.30528805757448 NA intron (NM_181048, intron 1 of 1) intron (NM_181048, intron 1 of 1) 360 NM_181048 319266 Mm.482460 NM_181048 ENSMUSG00000079144 A130010J15Rik - RIKEN cDNA A130010J15 gene protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-3 chr10 61648839 61649291 + 0.30528805757448 NA intron (NM_026438, intron 1 of 10) CpG 444 NM_026438 67895 Mm.28897 NM_026438 ENSMUSG00000020089 Ppa1 2010317E03Rik|Pyp pyrophosphatase (inorganic) 1 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-10 chr17 27840180 27840455 + 0.30528805757448 NA intron (NM_011432, intron 1 of 5) CpG 230 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-3 chr13 92610654 92610865 + 0.30528805757448 NA promoter-TSS (NM_172588) promoter-TSS (NM_172588) -379 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-11 chr5 135671252 135671731 + 0.30528805757448 NA Intergenic Intergenic -17654 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-7 chr2 173662849 173663195 + 0.30528805757448 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 3177 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-8 chr5 148373639 148373970 + 0.30528805757448 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 19011 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-5 chr15 13288772 13289142 + 0.30528805757448 NA Intergenic Intergenic -115282 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-6 chr13 89739597 89739925 + 0.30528805757448 NA intron (NM_001081249, intron 1 of 14) CpG 2751 NM_001081249 13003 Mm.158700 NM_019389 ENSMUSG00000021614 Vcan 5430420N07Rik|9430051N09|Cspg2|DPEAAE|NG2|PG-M|PG-M(V0)|PG-M(V1)|hdf versican protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-13 chr8 125923031 125923314 + 0.30528805757448 NA intron (NM_145608, intron 1 of 9) intron (NM_145608, intron 1 of 9) 12722 NM_145608 234878 Mm.216458 NM_145608 ENSMUSG00000031853 Map3k21 Mlk4|mKIAA1804 mitogen-activated protein kinase kinase kinase 21 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-11 chr17 31853242 31853778 + 0.30528805757448 NA intron (NM_010831, intron 3 of 13) intron (NM_010831, intron 3 of 13) 2294 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Hrt-20|Msk|Sik|Sik-1|Snf1lk salt inducible kinase 1 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-3 chr16 93246569 93246910 + 0.30528805757448 NA Intergenic Intergenic 106450 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-13 chr5 118560783 118561187 + 0.30528805757448 NA intron (NM_001347445, intron 1 of 30) CpG-11438 266 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-8 chr2 25272589 25272883 + 0.30528805757448 NA promoter-TSS (NM_023464) promoter-TSS (NM_023464) 270 NM_175300 99152 Mm.291624 NM_175300 ENSMUSG00000026965 Anapc2 9230107K09Rik|AL024279|Apc2|Emi4|Imi4|mKIAA1406 anaphase promoting complex subunit 2 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-7 chr4 149307997 149308279 + 0.30528805757448 NA promoter-TSS (NM_001290995) promoter-TSS (NM_001290995) -405 NM_001290995 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-4 chr11 8452300 8452836 + 0.30528805757448 NA intron (NM_001083587, intron 21 of 30) B1_Mur3|SINE|Alu 211967 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448 chr4 118180321 118180700 + 0.30528805757448 NA promoter-TSS (NM_172382) promoter-TSS (NM_172382) -467 NM_001161823 230674 Mm.234234 NM_172382 ENSMUSG00000033326 Kdm4a D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677 lysine (K)-specific demethylase 4A protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-4 chr17 25579267 25579539 + 0.30528805757448 NA intron (NR_045520, intron 1 of 8) CpG 229 NR_045520 76483 Mm.12787 NM_029624 ENSMUSG00000002279 Lmf1 2400010G15Rik|AW822050|Tmem112|cld lipase maturation factor 1 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-10 chr7 27507398 27508022 + 0.30528805757448 NA intron (NM_019412, intron 4 of 5) intron (NM_019412, intron 4 of 5) 8386 NM_019412 19153 Mm.10119 NM_019412 ENSMUSG00000053198 Prx L-Periaxin periaxin protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-2 chr11 120086336 120086759 + 0.30528805757448 NA intron (NM_009734, intron 1 of 25) CpG 280 NM_009734 12009 Mm.2556 NM_009734 ENSMUSG00000039781 Cep131 AZ1|Azi|Azi1 centrosomal protein 131 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-10 chr5 3501089 3501302 + 0.30528805757448 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -42638 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-10 chr15 83572134 83572478 + 0.30528805757448 NA exon (NM_009775, exon 3 of 4) exon (NM_009775, exon 3 of 4) 8733 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding unique_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448 chr2 35266924 35267362 + 0.30528805757448 NA intron (NM_001206367, intron 2 of 17) intron (NM_001206367, intron 2 of 17) 399 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448 chr1 66817772 66818195 + 0.30528805757448 NA promoter-TSS (NM_001122738) promoter-TSS (NM_001122738) -388 NM_001122738 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-12 chr18 38144407 38145043 + 0.30528805757448 NA Intergenic Intergenic 65037 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-7 chr18 66326394 66326756 + 0.30528805757448 NA Intergenic Intergenic -34737 NM_178793 320924 Mm.442049 NM_178793 ENSMUSG00000046318 Ccbe1 4933426F18Rik|9430093N24Rik|mKIAA1983 collagen and calcium binding EGF domains 1 protein-coding unique_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448 chr2 93176381 93176750 + 0.30528805757448 NA Intergenic Intergenic -10983 NM_001356536 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-6 chr2 30285862 30286270 + 0.30528805757448 NA promoter-TSS (NM_198304) promoter-TSS (NM_198304) 288 NM_177648 227697 Mm.26690 NM_177648 ENSMUSG00000075419 Dolk BC026973|Tmem15|mKIAA1094 dolichol kinase protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-5 chr11 30772255 30772564 + 0.30528805757448 NA intron (NM_134013, intron 1 of 46) CpG 634 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-8 chr15 81246661 81247036 + 0.30528805757448 NA intron (NR_077230, intron 1 of 1) intron (NR_077230, intron 1 of 1) 1123 NR_077229 78102 Mm.296832 NR_077229 ENSMUSG00000115970 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448 chr1 191224606 191224890 + 0.30528805757448 NA intron (NR_151547, intron 1 of 1) CpG 294 NR_151547 100504360 Mm.16927 NM_001033188 D730003I15Rik AU020850 RIKEN cDNA D730003I15 gene ncRNA common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-13 chr6 113470740 113471238 + 0.30528805757448 NA promoter-TSS (NM_134159) promoter-TSS (NM_134159) -466 NM_178942 171095 Mm.213397 NM_134159 ENSMUSG00000030281 Il17rc 1110025H02Rik|Gm19850|IL-17RC|IL17-RC|IL17-RL|Il17rl interleukin 17 receptor C protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-9 chr4 152296647 152296950 + 0.30528805757448 NA promoter-TSS (NR_037908) promoter-TSS (NR_037908) -416 NR_037908 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-15 chr8 122181059 122181391 + 0.30528805757448 NA Intergenic Intergenic -100916 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-2 chr1 106401251 106401488 + 0.30528805757448 NA Intergenic Intergenic 145262 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-14 chr8 121476396 121476849 + 0.30528805757448 NA Intergenic Intergenic 65332 NM_001357260 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-14 chr9 108567565 108567989 + 0.30528805757448 NA promoter-TSS (NR_029947) promoter-TSS (NR_029947) -435 NM_023247 66706 Mm.29471 NM_023247 ENSMUSG00000070283 Ndufaf3 4733401H18Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-2 chr10 24367038 24367694 + 0.30528805757448 NA Intergenic Intergenic 143849 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding unique_peak1_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-2 chr3 122087440 122087708 + 0.30528805757448 NA intron (NM_007378, intron 11 of 49) intron (NM_007378, intron 11 of 49) 43114 NM_007378 11304 Mm.3918 NM_007378 ENSMUSG00000028125 Abca4 AW050280|Abc10|Abcr|D430003I15Rik|RmP ATP-binding cassette, sub-family A (ABC1), member 4 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448 chr1 132290662 132290918 + 0.30528805757448 NA Intergenic Intergenic -7836 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-12 chr4 129819655 129819914 + 0.30528805757448 NA promoter-TSS (NM_001164745) promoter-TSS (NM_001164745) -695 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-9 chr16 93246561 93246929 + 0.30528805757448 NA Intergenic Intergenic 106444 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-14 chr7 102210525 102210896 + 0.30528805757448 NA promoter-TSS (NM_022979) promoter-TSS (NM_022979) 375 NM_001291358 233575 Mm.302013 NM_145583 ENSMUSG00000030990 Pgap2 1810006G21Rik|C76649|Frag1 post-GPI attachment to proteins 2 protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-6 chr16 45366454 45366821 + 0.30528805757448 NA Intergenic Intergenic 42416 NM_001358443 17470 Mm.245851 NM_010818 ENSMUSG00000022661 Cd200 Mox2|OX2 CD200 antigen protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-12 chr8 45002851 45003365 + 0.30528805757448 NA intron (NM_001081286, intron 2 of 25) intron (NM_001081286, intron 2 of 25) 52900 NM_001081286 14107 Mm.27365 NM_001081286 ENSMUSG00000070047 Fat1 2310038E12Rik|AU023433|Fath|mFat1 FAT atypical cadherin 1 protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-2 chr10 60824770 60825220 + 0.30528805757448 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 6586 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_31_25_0.0225453465034597_4.71171239139282_0.30528805757448 chr1 34011718 34012059 + 0.30528805757448 NA promoter-TSS (NM_133833) promoter-TSS (NM_133833) 63 NM_134448 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak2_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-15 chr9 122886766 122887180 + 0.30528805757448 NA Intergenic CpG -1498 NM_001177505 382118 Mm.86999 NM_001177505 ENSMUSG00000063488 Zkscan7 BC042569|Zfp167 zinc finger with KRAB and SCAN domains 7 protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448 chr10 116261223 116261695 + 0.30528805757448 NA intron (NM_001358484, intron 12 of 12) intron (NM_001358484, intron 12 of 12) -39915 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak1_30_25_-0.0229351990150652_4.68897211863356_0.30528805757448-7 chr2 121866330 121866729 + 0.30528805757448 NA promoter-TSS (NM_177054) promoter-TSS (NM_177054) -441 NM_199038 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding common_peak1_31_25_0.0225453465034597_4.71171239139282_0.30528805757448-4 chr13 44731001 44731282 + 0.30528805757448 NA promoter-TSS (NM_001360281) promoter-TSS (NM_001360281) -130 NM_001360281 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak2_29_26_-0.124354956964339_4.6927100236813_0.30528805757448-7 chr11 76480057 76480578 + 0.30528805757448 NA intron (NM_001346670, intron 2 of 21) intron (NM_001346670, intron 2 of 21) -11852 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_125_101_0.0138899767020959_6.67937033032254_0.305287852912469 chr11 120580583 120581990 + 0.305287852912469 NA intron (NM_133796, intron 1 of 5) CpG 334 NM_133796 192662 Mm.30016 NM_133796 ENSMUSG00000025132 Arhgdia 5330430M07Rik|Gdi-1|Rho-GDI|RhoDGI|RhoGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding common_peak1_122_103_-0.0486445483131988_6.67611744398449_0.305287852912444-2 chr15 37458005 37459386 + 0.305287852912444 NA promoter-TSS (NM_001359842) promoter-TSS (NM_001359842) -184 NM_001359842 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_122_103_-0.0486445483131988_6.67611744398449_0.305287852912444 chr14 25378267 25379047 + 0.305287852912444 NA Intergenic Intergenic -80528 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_123_103_-0.0370451581615541_6.68191713906031_0.305287852912444 chr11 51605678 51606844 + 0.305287852912444 NA intron (NM_001048061, intron 2 of 7) CpG 620 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding common_peak1_123_103_-0.0370451581615541_6.68191713906031_0.305287852912444-2 chr15 43281811 43282738 + 0.305287852912444 NA intron (NM_008388, intron 1 of 12) CpG 462 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak2_122_103_-0.0486445483131988_6.67611744398449_0.305287852912444 chr18 61055569 61057020 + 0.305287852912444 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 11144 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak2_280_231_-0.0226829239250899_7.84663953316503_0.305287815017319 chr11 78164507 78167188 + 0.305287815017319 NA promoter-TSS (NM_009423) promoter-TSS (NM_009423) -297 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_279_231_-0.0277899413015001_7.84408602447682_0.305287815017319 chr10 59948365 59951730 + 0.305287815017319 NA 3' UTR (NM_029083, exon 3 of 3) 3' UTR (NM_029083, exon 3 of 3) 1723 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak2_126_102_0.011139094390697_6.69207007437857_0.305246513187201 chr2 39225460 39226418 + 0.305246513187201 NA intron (NM_024209, intron 1 of 6) CpG 410 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik|Pp6C protein phosphatase 6, catalytic subunit protein-coding common_peak1_124_104_-0.0393447363331791_6.69457314949953_0.305246513187152 chr2 105398176 105399718 + 0.305246513187152 NA intron (NM_009037, intron 1 of 5) CpG 372 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding common_peak2_124_104_-0.0393447363331791_6.69457314949953_0.305246513187152 chr12 17544935 17546292 + 0.305246513187152 NA intron (NM_013614, intron 1 of 11) intron (NM_013614, intron 1 of 11) 740 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak1_128_103_0.0195834347225512_6.71023143550237_0.305205968493934 chr15 98830779 98831990 + 0.305205968493934 NA TTS (NM_001033276) TTS (NM_001033276) 124 NM_016781 19082 Mm.6670 NM_016781 ENSMUSG00000067713 Prkag1 AA571379|BB036179|Prkaac protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding common_peak2_128_103_0.0195834347225512_6.71023143550237_0.305205968493934 chr19 5016092 5016965 + 0.305205968493934 NA Intergenic Intergenic -7478 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding common_peak1_125_105_-0.0416051358896077_6.70711788661839_0.305205968493909 chr1 185363102 185364348 + 0.305205968493909 NA intron (NM_001357474, intron 1 of 32) intron (NM_001357474, intron 1 of 32) 681 NM_001357474 107508 Mm.154511 NM_029735 ENSMUSG00000026615 Eprs 2410081F06Rik|3010002K18Rik|C79379|Qprs glutamyl-prolyl-tRNA synthetase protein-coding common_peak2_125_105_-0.0416051358896077_6.70711788661839_0.305205968493909 chr4 57956642 57957749 + 0.305205968493909 NA promoter-TSS (NM_011660) promoter-TSS (NM_011660) -784 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak2_129_104_0.0168395963963812_6.72266531586431_0.305166196115815 chr19 17257189 17258590 + 0.305166196115815 NA Intergenic Intergenic 81616 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_288_238_-0.0253550966721301_7.88818925964468_0.305161789050223 chr3 130058108 130060731 + 0.305161789050223 NA intron (NM_207209, intron 1 of 23) intron (NM_207209, intron 1 of 23) 1488 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding unique_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-4 chr6 22279900 22280569 + 0.30512735654709 NA Intergenic Intergenic -7993 NM_053116 93735 Mm.137403 NM_053116 ENSMUSG00000029671 Wnt16 E130309I19Rik wingless-type MMTV integration site family, member 16 protein-coding unique_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709 chr5 139774948 139775503 + 0.30512735654709 NA intron (NM_026748, intron 1 of 46) intron (NM_026748, intron 1 of 46) 453 NM_026748 68510 Mm.292942 NM_026748 ENSMUSG00000029547 Ints1 1110015K06Rik integrator complex subunit 1 protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-9 chr7 111029154 111029570 + 0.30512735654709 NA intron (NM_009431, intron 1 of 24) CpG 411 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-4 chr3 38142938 38143563 + 0.30512735654709 NA Intergenic Intergenic 64869 NR_040541 71342 Mm.410782 NR_040541 ENSMUSG00000106002 5430434I15Rik - RIKEN cDNA 5430434I15 gene ncRNA common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-8 chr6 131346567 131346940 + 0.30512735654709 NA Intergenic Intergenic -32926 NM_172891 243659 Mm.20114 NM_172891 ENSMUSG00000032899 Styk1 9130025L13|AI326477|Nok serine/threonine/tyrosine kinase 1 protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-6 chr2 73312110 73312434 + 0.30512735654709 NA promoter-TSS (NM_029022) promoter-TSS (NM_029022) 320 NM_025854 66935 Mm.292140 NM_025854 ENSMUSG00000041777 Cir1 1700023B02Rik|2810021A19Rik|Cicr|Cir corepressor interacting with RBPJ, 1 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-8 chr5 74068510 74068803 + 0.30512735654709 NA promoter-TSS (NM_177561) promoter-TSS (NM_177561) -245 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709 chr1 45627430 45627858 + 0.30512735654709 NA Intergenic Intergenic -124362 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-13 chr7 67971937 67972452 + 0.30512735654709 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 19937 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-5 chr8 45581226 45581566 + 0.30512735654709 NA intron (NM_001205219, intron 1 of 23) intron (NM_001205219, intron 1 of 23) -46355 NM_001310707 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-8 chr16 4644529 4644943 + 0.30512735654709 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 4791 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding unique_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-3 chr3 88509284 88509856 + 0.30512735654709 NA Intergenic Intergenic -6218 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-7 chr2 127008840 127009128 + 0.30512735654709 NA intron (NM_175550, intron 1 of 20) CpG 273 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709 chr11 29692256 29692647 + 0.30512735654709 NA promoter-TSS (NM_194053) promoter-TSS (NM_194053) -447 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-3 chr3 127789425 127790016 + 0.30512735654709 NA promoter-TSS (NM_145133) promoter-TSS (NM_145133) -152 NM_145133 211550 Mm.31852 NM_145133 ENSMUSG00000046688 Tifa T2bp TRAF-interacting protein with forkhead-associated domain protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-3 chr13 23562896 23563223 + 0.30512735654709 NA promoter-TSS (NM_178205) promoter-TSS (NM_178205) -694 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-5 chr11 99106981 99107333 + 0.30512735654709 NA Intergenic Intergenic -17851 NM_172564 217169 Mm.262067 NM_172564 ENSMUSG00000017607 Tns4 9930017A07Rik|AA589547|AU016405|Cten tensin 4 protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-5 chr2 84522694 84523195 + 0.30512735654709 NA Intergenic Intergenic -16071 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 - predicted gene 13710 ncRNA common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-9 chr9 41481979 41482433 + 0.30512735654709 NA intron (NR_131931, intron 1 of 2) intron (NR_131931, intron 1 of 2) 7313 NR_131930 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-7 chr6 34582951 34583519 + 0.30512735654709 NA Intergenic Intergenic -15269 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-7 chr5 5688534 5688876 + 0.30512735654709 NA intron (NM_028734, intron 1 of 5) intron (NM_028734, intron 1 of 5) 5384 NM_001285471 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding unique_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-2 chr16 50363714 50364272 + 0.30512735654709 NA intron (NM_027444, intron 2 of 16) intron (NM_027444, intron 2 of 16) 68396 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-6 chr2 26132663 26132932 + 0.30512735654709 NA Intergenic Intergenic 6746 NM_001256522 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-8 chr4 84115036 84115590 + 0.30512735654709 NA Intergenic Intergenic -70434 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709 chr11 98933085 98933767 + 0.30512735654709 NA Intergenic Intergenic -4270 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-6 chr5 29377952 29378285 + 0.30512735654709 NA intron (NM_020295, intron 1 of 16) CpG 272 NM_020295 56873 Mm.41572 NM_020295 ENSMUSG00000010721 Lmbr1 1110048D14Rik|AU017641 limb region 1 protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-4 chr2 60871267 60871766 + 0.30512735654709 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 9922 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-2 chr7 141131313 141131831 + 0.30512735654709 NA intron (NM_013782, intron 1 of 11) CpG 286 NM_013782 27388 Mm.293591 NM_013782 ENSMUSG00000025495 Ptdss2 AI481134|AI988017|PSS2 phosphatidylserine synthase 2 protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709 chr11 102900391 102900889 + 0.30512735654709 NA Intergenic Intergenic -3440 NM_010277 14580 Mm.1239 NM_010277 ENSMUSG00000020932 Gfap AI836096 glial fibrillary acidic protein protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-6 chr12 57196733 57197261 + 0.30512735654709 NA 5' UTR (NM_172577, exon 1 of 10) 5' UTR (NM_172577, exon 1 of 10) 475 NM_172577 217593 Mm.32835 NM_172577 ENSMUSG00000035472 Slc25a21 9930033G19Rik|A630030I10|BB158148 solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-3 chr17 12915516 12916034 + 0.30512735654709 NA promoter-TSS (NM_013686) promoter-TSS (NM_013686) 316 NM_026310 67681 Mm.290166 NM_026310 ENSMUSG00000057388 Mrpl18 1010001C05Rik|C79879|HSPC071|MRP-L18 mitochondrial ribosomal protein L18 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709 chr11 121236809 121237032 + 0.30512735654709 NA promoter-TSS (NM_026272) promoter-TSS (NM_026272) -316 NM_026272 67608 Mm.291832 NM_026272 ENSMUSG00000000056 Narf 4430402O11Rik nuclear prelamin A recognition factor protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-4 chr11 75454090 75454595 + 0.30512735654709 NA exon (NM_138950, exon 1 of 10) exon (NM_138950, exon 1 of 10) 375 NM_138950 192652 Mm.340378 NM_138950 ENSMUSG00000045374 Wdr81 BC054822|Gm883|mFLJ00182|nur5 WD repeat domain 81 protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-3 chr11 71018870 71019221 + 0.30512735654709 NA promoter-TSS (NM_025993) promoter-TSS (NM_025993) 258 NM_001291147 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-5 chr18 61707036 61707374 + 0.30512735654709 NA intron (NM_172832, intron 1 of 5) intron (NM_172832, intron 1 of 5) 430 NM_172832 240334 Mm.234457 NM_172832 ENSMUSG00000024579 Pcyox1l BC060677|C630049M13 prenylcysteine oxidase 1 like protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709 chr11 72500293 72500768 + 0.30512735654709 NA intron (NM_029932, intron 9 of 11) intron (NM_029932, intron 9 of 11) -10610 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-10 chr7 98480623 98481118 + 0.30512735654709 NA Intergenic Intergenic -13352 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-2 chr13 37784559 37784947 + 0.30512735654709 NA Intergenic Intergenic -41285 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-10 chr4 155783993 155784599 + 0.30512735654709 NA exon (NM_001033394, exon 2 of 2) exon (NM_001033394, exon 2 of 2) 1578 NM_001033394 320587 Mm.384382 NM_001033394 ENSMUSG00000073680 Tmem88b A230069A22Rik transmembrane protein 88B protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-3 chr17 33824187 33824399 + 0.30512735654709 NA promoter-TSS (NR_103515) promoter-TSS (NR_103515) 269 NM_016844 54127 Mm.352374 NM_016844 ENSMUSG00000067288 Rps28 - ribosomal protein S28 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-9 chr6 117545062 117545337 + 0.30512735654709 NA Intergenic Intergenic 49964 NR_152214 100126203 Mm.217172 NR_152214 6820426E19Rik Gm43983 RIKEN cDNA 6820426E19 gene ncRNA unique_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709 chr8 46005132 46005647 + 0.30512735654709 NA Intergenic Intergenic -5213 NM_026278 67620 Mm.383914 NM_026278 ENSMUSG00000031637 Lrp2bp 1700113N17Rik|2310006J04Rik|4930479L12Rik|MegBP Lrp2 binding protein protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-9 chr4 115784722 115785243 + 0.30512735654709 NA exon (NM_181040, exon 1 of 9) exon (NM_181040, exon 1 of 9) 168 NM_181040 230649 Mm.109600 NM_181040 ENSMUSG00000028710 Atpaf1 6330547J17Rik|AI593252|ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-10 chr9 57643663 57643909 + 0.30512735654709 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 1867 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-12 chr6 47758228 47758477 + 0.30512735654709 NA Intergenic CpG -5427 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-9 chr16 90885520 90885861 + 0.30512735654709 NA intron (NM_027627, intron 4 of 6) intron (NM_027627, intron 4 of 6) 49159 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-4 chr7 68748824 68749223 + 0.30512735654709 NA exon (NM_025549, exon 1 of 5) exon (NM_025549, exon 1 of 5) 215 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-4 chr18 36400087 36400477 + 0.30512735654709 NA Intergenic Intergenic 51658 NM_001081365 66060 Mm.272527 NM_001081365 ENSMUSG00000046727 Cystm1 0610010O12Rik cysteine-rich transmembrane module containing 1 protein-coding unique_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-2 chr15 38714053 38714676 + 0.30512735654709 NA non-coding (NR_131206, exon 3 of 3) non-coding (NR_131206, exon 3 of 3) 14152 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-2 chr11 117264428 117264974 + 0.30512735654709 NA intron (NM_001113486, intron 2 of 11) intron (NM_001113486, intron 2 of 11) -1545 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-12 chr8 4227022 4227400 + 0.30512735654709 NA intron (NM_028175, intron 1 of 2) intron (NM_028175, intron 1 of 2) 384 NM_028175 72267 Mm.25479 NM_028175 ENSMUSG00000046589 Lrrc8e 1810049O03Rik|C87354 leucine rich repeat containing 8 family, member E protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-2 chr10 81560676 81561239 + 0.30512735654709 NA intron (NM_001276288, intron 1 of 6) intron (NM_001276288, intron 1 of 6) 1513 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-7 chrX 8145360 8145630 + 0.30512735654709 NA promoter-TSS (NR_033561) promoter-TSS (NR_033561) 68 NR_033561 70226 Mm.391639 NR_033561 ENSMUSG00000055188 Rbm3os 2900002K06Rik RNA binding motif protein 3, opposite strand ncRNA common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-3 chr15 80219604 80219900 + 0.30512735654709 NA Intergenic Intergenic -14328 NM_001357659 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-10 chr7 142085144 142085686 + 0.30512735654709 NA intron (NM_008748, intron 3 of 6) intron (NM_008748, intron 3 of 6) 9869 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-2 chr12 104002906 104003222 + 0.30512735654709 NA intron (NM_027997, intron 2 of 4) intron (NM_027997, intron 2 of 4) 10588 NM_001361912 71907 Mm.326723 NM_027997 ENSMUSG00000058260 Serpina9 2310014L03Rik|AW049635|Centerin serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-5 chr4 43030987 43031276 + 0.30512735654709 NA intron (NM_023231, intron 1 of 9) CpG-9849 253 NM_023231 66592 Mm.331565 NM_023231 ENSMUSG00000028455 Stoml2 0610038F01Rik|MSLP2|SLP-2 stomatin (Epb7.2)-like 2 protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-6 chr4 131696272 131696768 + 0.30512735654709 NA Intergenic Intergenic 141758 NM_011214 19273 Mm.4860 NM_011214 ENSMUSG00000028909 Ptpru Ftp-1|PCP-2|PTP|PTP-lambda|PTPlambda|Pcp2|Ptpf|Ptprl|R-PTP-U|R-PTP-psi|RPTPlambda protein tyrosine phosphatase, receptor type, U protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709 chr10 59702911 59703188 + 0.30512735654709 NA intron (NM_001359267, intron 1 of 11) intron (NM_001359267, intron 1 of 11) 486 NM_001291443 216001 Mm.27199 NM_144822 ENSMUSG00000020111 Micu1 C730016L05Rik|Calc|Cbara1 mitochondrial calcium uptake 1 protein-coding unique_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709 chr14 22887608 22888266 + 0.30512735654709 NA intron (NM_028275, intron 6 of 6) intron (NM_028275, intron 6 of 6) 206634 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 - predicted gene 10248 ncRNA unique_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-2 chr8 26805024 26805415 + 0.30512735654709 NA Intergenic Intergenic 19204 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-4 chr19 3903267 3903775 + 0.30512735654709 NA exon (NM_016921, exon 4 of 20) exon (NM_016921, exon 4 of 20) 1709 NM_016921 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-7 chr12 105009414 105009957 + 0.30512735654709 NA intron (NM_172500, intron 1 of 16) CpG 124 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-14 chr9 46110976 46111466 + 0.30512735654709 NA intron (NM_027498, intron 1 of 24) intron (NM_027498, intron 1 of 24) 98401 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-2 chr12 102412888 102413251 + 0.30512735654709 NA intron (NM_011175, intron 3 of 13) intron (NM_011175, intron 3 of 13) 26744 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-6 chr8 106377900 106378309 + 0.30512735654709 NA Intergenic Intergenic -37235 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding unique_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709 chr14 73445583 73446035 + 0.30512735654709 NA Intergenic Intergenic -60520 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-11 chr7 98515213 98515651 + 0.30512735654709 NA Intergenic Intergenic 21210 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-2 chr16 4600944 4601454 + 0.30512735654709 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 6486 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-5 chr6 39552335 39552717 + 0.30512735654709 NA intron (NM_172477, intron 1 of 18) intron (NM_172477, intron 1 of 18) 5308 NM_172477 209773 Mm.440021 NM_172477 ENSMUSG00000038456 Dennd2a B930096L08Rik|C130031G22|mKIAA1277 DENN/MADD domain containing 2A protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-11 chr5 29377943 29378298 + 0.30512735654709 NA intron (NM_020295, intron 1 of 16) CpG 270 NM_020295 56873 Mm.41572 NM_020295 ENSMUSG00000010721 Lmbr1 1110048D14Rik|AU017641 limb region 1 protein-coding common_peak1_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-8 chr7 98515191 98515589 + 0.30512735654709 NA Intergenic Intergenic 21168 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-3 chr19 5731194 5731670 + 0.30512735654709 NA intron (NM_020491, intron 2 of 3) CpG 300 NM_020491 56390 Mm.455818 NM_020491 ENSMUSG00000079478 Sssca1 1500016H19Rik|C184L Sjogren syndrome/scleroderma autoantigen 1 protein-coding common_peak2_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-7 chr6 34475570 34476007 + 0.30512735654709 NA promoter-TSS (NM_007563) promoter-TSS (NM_007563) -568 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak1_31_27_-0.0843698574130523_4.76516999335108_0.30512735654709-5 chr2 69400507 69400867 + 0.30512735654709 NA intron (NM_175512, intron 4 of 4) intron (NM_175512, intron 4 of 4) 20225 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak2_30_27_-0.129850402931577_4.74242972059182_0.30512735654709-13 chr8 72493025 72493477 + 0.30512735654709 NA promoter-TSS (NM_177766) promoter-TSS (NM_177766) -637 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak2_32_26_0.0121784822342903_4.76097674328061_0.30512735654709-11 chr9 105495285 105495703 + 0.30512735654709 NA promoter-TSS (NM_175025) promoter-TSS (NM_175025) -361 NM_001253836 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak2_127_107_-0.0460123966654047_6.73188130383077_0.305127174193636 chr5 134638384 134639337 + 0.305127174193636 NA intron (NM_033561, intron 1 of 6) CpG 549 NM_001312867 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding common_peak1_128_107_-0.0348643492998253_6.73745532751356_0.305127174193636 chr5 145204570 145205794 + 0.305127174193636 NA 5' UTR (NM_001167944, exon 1 of 4) 5' UTR (NM_001167944, exon 1 of 4) 623 NM_001359188 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding common_peak2_127_107_-0.0460123966654047_6.73188130383077_0.305127174193636-2 chr7 123123848 123124676 + 0.305127174193636 NA 5' UTR (NM_144925, exon 1 of 24) 5' UTR (NM_144925, exon 1 of 24) 377 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_130_105_0.0141418538791918_6.73499138150279_0.305127174193611 chr2 32174749 32175842 + 0.305127174193611 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 24147 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_295_237_0.0149780390297645_7.90230678282283_0.305127140428634 chr15 103364512 103367250 + 0.305127140428634 NA intron (NM_001314041, intron 1 of 30) intron (NM_001314041, intron 1 of 30) 910 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak2_297_239_0.0125518213435045_7.91316650628027_0.305093068095113 chr6 52215429 52219005 + 0.305093068095113 NA exon (NM_010455, exon 1 of 2) exon (NM_010455, exon 1 of 2) 1356 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak1_129_108_-0.0370992107144223_6.74963471941972_0.305088881685371 chr16 87699041 87700112 + 0.305088881685371 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 622 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak2_133_107_0.0196105359036753_6.76469277011531_0.305051298328157 chr15 98830727 98832023 + 0.305051298328157 NA TTS (NM_001033276) TTS (NM_001033276) 133 NM_016781 19082 Mm.6670 NM_016781 ENSMUSG00000067713 Prkag1 AA571379|BB036179|Prkaac protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding common_peak2_132_107_0.00888002238256469_6.75932751335475_0.305051298328157 chr16 30387684 30388850 + 0.305051298328157 NA intron (NM_001128096, intron 1 of 33) CpG 263 NM_001128094 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding common_peak1_133_107_0.0196105359036753_6.76469277011531_0.305051298328157 chr2 18693655 18694703 + 0.305051298328157 NA Intergenic CpG -4843 NM_001001334 381350 Mm.330024 NM_001001334 ENSMUSG00000037708 Spag6 Spag6l sperm associated antigen 6 protein-coding common_peak2_130_109_-0.0392974050822694_6.76171101098353_0.305051298328157 chr9 45905935 45907270 + 0.305051298328157 NA promoter-TSS (NM_001281934) promoter-TSS (NM_001281934) 33 NM_008794 18554 Mm.3255 NM_008794 ENSMUSG00000035382 Pcsk7 AA959856|PC7|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding common_peak1_133_107_0.0196105359036753_6.76469277011531_0.305051298328157-2 chr3 121700966 121702925 + 0.305051298328157 NA Intergenic B3|SINE|B2 -21592 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_131_110_-0.0414598410988365_6.77368594580069_0.305014404603402 chr8 40307565 40308560 + 0.305014404603402 NA promoter-TSS (NR_106126) promoter-TSS (NR_106126) 11 NM_030110 78506 Mm.169893 NM_030110 ENSMUSG00000039478 Micu3 2900075B16Rik|Efha2 mitochondrial calcium uptake family, member 3 protein-coding common_peak1_131_110_-0.0414598410988365_6.77368594580069_0.305014404603402 chr5 134638289 134639391 + 0.305014404603402 NA intron (NM_033561, intron 1 of 6) CpG 569 NM_001312867 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding common_peak1_134_108_0.0169644453038682_6.77666654742886_0.305014404603377 chr6 86848463 86850253 + 0.305014404603377 NA promoter-TSS (NR_028298) promoter-TSS (NR_028298) 82 NR_028298 67170 Mm.119489 NR_028298 ENSMUSG00000100164 2610306M01Rik - RIKEN cDNA 2610306M01 gene ncRNA common_peak2_134_108_0.0169644453038682_6.77666654742886_0.305014404603377 chr1 33813546 33814496 + 0.305014404603377 NA intron (NM_001359274, intron 1 of 13) intron (NM_001359274, intron 1 of 13) 574 NM_133817 98403 Mm.289103 NM_133817 ENSMUSG00000042197 Zfp451 4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702 zinc finger protein 451 protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-8 chr6 34475608 34476065 + 0.304978344874324 NA promoter-TSS (NM_007563) promoter-TSS (NM_007563) -520 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-3 chr15 28159021 28159569 + 0.304978344874324 NA Intergenic Intergenic -44471 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-8 chr2 30996189 30996786 + 0.304978344874324 NA intron (NM_028846, intron 2 of 24) intron (NM_028846, intron 2 of 24) 14208 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-5 chr4 11007938 11008281 + 0.304978344874324 NA promoter-TSS (NM_175175) promoter-TSS (NM_175175) -490 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding unique_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324 chr4 47294321 47294861 + 0.304978344874324 NA intron (NM_009928, intron 28 of 39) intron (NM_009928, intron 28 of 39) -58631 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-7 chr4 151044280 151044580 + 0.304978344874324 NA 5' UTR (NM_001289878, exon 1 of 22) 5' UTR (NM_001289878, exon 1 of 22) 235 NM_011067 18628 Mm.121361 NM_011067 ENSMUSG00000028957 Per3 2810049O06Rik|mPer3 period circadian clock 3 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-7 chr7 88939636 88940251 + 0.304978344874324 NA Intergenic Intergenic 398844 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-9 chr6 38918938 38919304 + 0.304978344874324 NA 5' UTR (NM_011539, exon 1 of 13) 5' UTR (NM_011539, exon 1 of 13) 135 NM_011539 21391 Mm.4054 NM_011539 ENSMUSG00000029925 Tbxas1 CYP5|CYP5A1|THAS|TS|TXAS|TXS thromboxane A synthase 1, platelet protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-4 chr2 121956459 121956885 + 0.304978344874324 NA promoter-TSS (NM_008545) promoter-TSS (NM_008545) -580 NM_008545 17147 Mm.389349 NM_008545 ENSMUSG00000074881 Mageb3 Mage-b3|Mage-ps1|Mage-rs3|Smage3 melanoma antigen, family B, 3 protein-coding common_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324 chr11 90249523 90250012 + 0.304978344874324 NA intron (NM_026178, intron 1 of 6) CpG 291 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-6 chr3 69044219 69044830 + 0.304978344874324 NA intron (NM_025863, intron 1 of 2) CpG 218 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-3 chr18 67935401 67935706 + 0.304978344874324 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 2380 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-10 chr9 69875773 69876308 + 0.304978344874324 NA Intergenic Intergenic -113426 NM_016787 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-9 chr8 71591622 71591962 + 0.304978344874324 NA promoter-TSS (NM_025396) promoter-TSS (NM_025396) -392 NM_025396 66171 Mm.282284 NM_025396 ENSMUSG00000031807 Pgls 1110030K05Rik|AI447866|Plgs 6-phosphogluconolactonase protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-6 chr17 14340324 14340702 + 0.304978344874324 NA intron (NM_022315, intron 4 of 12) intron (NM_022315, intron 4 of 12) 58429 NR_027986 74917 Mm.32228 NM_183107 4930474M22Rik - RIKEN cDNA 4930474M22 gene ncRNA common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-9 chr6 146956112 146956564 + 0.304978344874324 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -1917 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding unique_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-3 chr5 77361406 77362090 + 0.304978344874324 NA intron (NM_008048, intron 1 of 4) intron (NM_008048, intron 1 of 4) 46297 NM_001159518 29817 Mm.233470 NM_008048 ENSMUSG00000036256 Igfbp7 AGM|Fstl2|Mac25 insulin-like growth factor binding protein 7 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-6 chr6 108658813 108659181 + 0.304978344874324 NA intron (NR_104577, intron 1 of 6) intron (NR_104577, intron 1 of 6) -1632 NM_011498 20893 Mm.2436 NM_011498 ENSMUSG00000030103 Bhlhe40 Bhlhb2|C130042M06Rik|CR8|Clast5|Dec1|Sharp2|Stra13|Stra14 basic helix-loop-helix family, member e40 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-3 chr13 54687932 54688186 + 0.304978344874324 NA promoter-TSS (NM_001146025) promoter-TSS (NM_001146025) 141 NM_001146027 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324 chr12 55836449 55836846 + 0.304978344874324 NA intron (NR_155205, intron 1 of 10) CpG 281 NR_155205 52592 Mm.24761 NM_027867 ENSMUSG00000012076 Brms1l 0710008O11Rik|AI159718|BRMS1|D12Ertd407e breast cancer metastasis-suppressor 1-like protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-10 chr6 94657445 94658011 + 0.304978344874324 NA intron (NM_001355269, intron 2 of 17) intron (NM_001355269, intron 2 of 17) 42417 NM_001355269 16206 Mm.245210 NM_008377 ENSMUSG00000030029 Lrig1 D6Bwg0781e|Img|LIG-1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-12 chr8 105565001 105565440 + 0.304978344874324 NA intron (NM_013477, intron 1 of 7) intron (NM_013477, intron 1 of 7) 844 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324 chr10 86269977 86270337 + 0.304978344874324 NA intron (NM_013722, intron 6 of 13) intron (NM_013722, intron 6 of 13) -30255 NM_011595 21859 Mm.4871 NM_011595 ENSMUSG00000020044 Timp3 Timp-3 tissue inhibitor of metalloproteinase 3 protein-coding common_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-6 chr7 84335707 84336373 + 0.304978344874324 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 73998 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-11 chr7 74344900 74345240 + 0.304978344874324 NA intron (NM_001038643, intron 4 of 10) intron (NM_001038643, intron 4 of 10) 209710 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-5 chr15 102974183 102974603 + 0.304978344874324 NA TTS (NR_029722) TTS (NR_029722) 1043 NR_029722 723958 NR_029722 ENSMUSG00000065488 Mir196a-2 Mirn196a-2|mir-196a-2 microRNA 196a-2 ncRNA unique_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324 chr11 79611376 79611896 + 0.304978344874324 NA intron (NR_003283, intron 2 of 2) intron (NR_003283, intron 2 of 2) 11527 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-4 chr2 52938950 52939446 + 0.304978344874324 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 81330 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-2 chr11 48816456 48816899 + 0.304978344874324 NA 5' UTR (NM_145377, exon 1 of 6) 5' UTR (NM_145377, exon 1 of 6) 714 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-2 chr14 20765809 20766164 + 0.304978344874324 NA exon (NM_001039138, exon 7 of 20) exon (NM_001039138, exon 7 of 20) 28102 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-8 chr8 54550219 54550566 + 0.304978344874324 NA promoter-TSS (NM_029569) promoter-TSS (NM_029569) 61 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-3 chr15 59315026 59315445 + 0.304978344874324 NA 5' UTR (NM_009270, exon 1 of 11) 5' UTR (NM_009270, exon 1 of 11) 143 NM_009270 20775 Mm.296169 NM_009270 ENSMUSG00000022351 Sqle AI323792 squalene epoxidase protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324 chr11 114849355 114849819 + 0.304978344874324 NA Intergenic Intergenic -1945 NM_001110337 70355 Mm.242413 NM_147217 ENSMUSG00000051043 Gprc5c 1110028I06Rik|3200002M13Rik|Raig3 G protein-coupled receptor, family C, group 5, member C protein-coding common_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-5 chr3 116007029 116007336 + 0.304978344874324 NA promoter-TSS (NM_001163515) promoter-TSS (NM_001163515) 224 NM_023214 66500 Mm.34550 NM_023214 ENSMUSG00000054414 Slc30a7 1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-2 chr12 110602838 110603348 + 0.304978344874324 NA intron (NM_030238, intron 1 of 76) intron (NM_030238, intron 1 of 76) 1698 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-5 chr2 119547876 119548306 + 0.304978344874324 NA promoter-TSS (NM_172857) promoter-TSS (NM_172857) 384 NM_019769 56398 Mm.214765 NM_019769 ENSMUSG00000014077 Chp1 1500003O03Rik|AA960066|AI046351|Cahp|Chp|Sid470p|p24|vac calcineurin-like EF hand protein 1 protein-coding unique_peak2_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-2 chr12 32060537 32061071 + 0.304978344874324 NA exon (NM_011158, exon 1 of 11) exon (NM_011158, exon 1 of 11) 475 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding common_peak1_32_28_-0.0909150107298133_4.81252348976266_0.304978344874324-2 chr15 11589851 11590296 + 0.304978344874324 NA Intergenic Intergenic -190415 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-4 chr18 60755790 60756144 + 0.304978344874324 NA Intergenic Intergenic -7302 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-4 chr15 38999865 39000339 + 0.304978344874324 NA Intergenic Intergenic -6178 NM_001162494 14368 Mm.4769 NM_008056 ENSMUSG00000022297 Fzd6 Fz6 frizzled class receptor 6 protein-coding common_peak2_33_27_0.00247593527884771_4.80859288969703_0.304978344874324-7 chr19 5749728 5750143 + 0.304978344874324 NA intron (NM_008520, intron 12 of 27) MIRb|SINE|MIR 9031 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak2_135_109_0.0143611846653036_6.78854030585731_0.304978181701406-3 chr9 63968897 63971007 + 0.304978181701406 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 52107 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_135_109_0.0143611846653036_6.78854030585731_0.304978181701406 chr11 94629822 94630804 + 0.304978181701406 NA intron (NM_133807, intron 1 of 6) intron (NM_133807, intron 1 of 6) 489 NM_133807 98238 Mm.172720 NM_133807 ENSMUSG00000020869 Lrrc59 AA959742|C78668 leucine rich repeat containing 59 protein-coding common_peak2_135_109_0.0143611846653036_6.78854030585731_0.304978181701406-2 chr7 109519201 109520385 + 0.304978181701406 NA promoter-TSS (NR_028079) promoter-TSS (NR_028079) -339 NR_028079 100302499 Mm.482651 NR_028079 ENSMUSG00000065016 Snora3 MBI-28 small nucleolar RNA, H/ACA box 3 snoRNA common_peak1_134_112_-0.0350301923343936_6.80266386624799_0.304942611491146-2 chr9 63927307 63928547 + 0.304942611491146 NA Intergenic Intergenic 94132 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_136_110_0.0117997077656735_6.80031572023294_0.304942611491146 chr5 144255247 144256779 + 0.304942611491146 NA intron (NM_001163709, intron 2 of 2) intron (NM_001163709, intron 2 of 2) 788 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding common_peak1_134_112_-0.0350301923343936_6.80266386624799_0.304942611491146 chr11 72607375 72608336 + 0.304942611491146 NA intron (NM_025985, intron 1 of 5) CpG 594 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding common_peak1_136_110_0.0117997077656735_6.80031572023294_0.304942611491146 chr19 9075460 9077044 + 0.304942611491146 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 11704 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_137_111_0.00927900239286128_6.81199442325403_0.304907676488703 chr15 95803103 95804284 + 0.304907676488703 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 12850 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak2_136_114_-0.0392744768285951_6.82585281253008_0.30487335982925 chr15 102404944 102405616 + 0.30487335982925 NA Intergenic Intergenic -1036 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_138_112_0.00679808896789869_6.82357800689914_0.30487335982925 chr1 43224458 43225550 + 0.30487335982925 NA Intergenic Intergenic -28243 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_138_112_0.00679808896789869_6.82357800689914_0.30487335982925-2 chr9 34993048 34994754 + 0.30487335982925 NA intron (NM_001190912, intron 4 of 15) intron (NM_001190912, intron 4 of 15) -122827 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_139_112_0.0170670709841279_6.82871249790725_0.30487335982925 chr17 28952026 28953683 + 0.30487335982925 NA promoter-TSS (NM_025888) promoter-TSS (NM_025888) 255 NM_001356298 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding unique_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-2 chr6 108185019 108185437 + 0.304839791830758 NA intron (NM_145937, intron 1 of 8) intron (NM_145937, intron 1 of 8) 355 NM_145937 58911 Mm.439876 NM_145937 ENSMUSG00000030101 Sumf1 AA543204|AI463102|AI851573|FGE sulfatase modifying factor 1 protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758 chr10 50591998 50592356 + 0.304839791830758 NA promoter-TSS (NM_198007) promoter-TSS (NM_198007) -492 NM_198007 77987 Mm.222497 NM_198007 ENSMUSG00000038774 Ascc3 ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-6 chr19 30256724 30257205 + 0.304839791830758 NA Intergenic Intergenic 24007 NM_010776 17195 Mm.30045 NM_010776 ENSMUSG00000024863 Mbl2 L-MBP|MBL|MBL-C|MBP-C mannose-binding lectin (protein C) 2 protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-9 chr4 14864405 14864711 + 0.304839791830758 NA intron (NM_028264, intron 1 of 6) intron (NM_028264, intron 1 of 6) 339 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360|Pip4p2 transmembrane protein 55A protein-coding unique_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758 chr10 27982380 27982885 + 0.304839791830758 NA Intergenic Intergenic -92188 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-4 chr11 96034996 96035330 + 0.304839791830758 NA intron (NM_001356362, intron 1 of 6) intron (NM_001356362, intron 1 of 6) 278 NM_001356362 27681 Mm.372235 NM_033568 ENSMUSG00000006058 Snf8 D11Moh34 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-10 chr5 136584968 136585434 + 0.304839791830758 NA Intergenic Intergenic -17711 NM_001291238 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding unique_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-3 chr7 3289572 3290347 + 0.304839791830758 NA promoter-TSS (NM_016969) promoter-TSS (NM_016969) -596 NM_016969 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-13 chr9 50846638 50847040 + 0.304839791830758 NA Intergenic Intergenic -10085 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-4 chr7 134260303 134260798 + 0.304839791830758 NA Intergenic Intergenic -35453 NM_007400 11489 Mm.439714 NM_007400 ENSMUSG00000054555 Adam12 Mltna a disintegrin and metallopeptidase domain 12 (meltrin alpha) protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-11 chr6 41548684 41549184 + 0.304839791830758 NA Intergenic Intergenic 27158 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-5 chr19 16997120 16997473 + 0.304839791830758 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 41178 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-2 chr1 85894615 85895105 + 0.304839791830758 NA intron (NM_022417, intron 1 of 5) CpG 350 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-11 chr9 13442679 13443226 + 0.304839791830758 NA Intergenic Intergenic 11591 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-7 chr2 131761878 131762222 + 0.304839791830758 NA Intergenic Intergenic 85606 NR_029381 414081 Mm.246905 NR_029381 ENSMUSG00000086822 5330413P13Rik - RIKEN cDNA 5330413P13 gene ncRNA common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-12 chr7 24972190 24972615 + 0.304839791830758 NA intron (NM_010261, intron 1 of 4) intron (NM_010261, intron 1 of 4) 326 NM_010261 14470 Mm.22473 NM_010261 ENSMUSG00000003380 Rabac1 2310040I06Rik|Gbpap1|PRA1|prenylin Rab acceptor 1 (prenylated) protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-8 chr3 121576950 121577456 + 0.304839791830758 NA Intergenic Intergenic -44859 NM_145394 213603 Mm.33062 NM_145394 ENSMUSG00000039865 Slc44a3 BC010552 solute carrier family 44, member 3 protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-9 chr4 114602301 114602767 + 0.304839791830758 NA intron (NM_001085549, intron 5 of 6) intron (NM_001085549, intron 5 of 6) 195810 NM_001085549 666048 Mm.331779 NM_001085549 ENSMUSG00000070867 Trabd2b Gm12824|Hkat TraB domain containing 2B protein-coding unique_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758 chr13 64312189 64312601 + 0.304839791830758 NA intron (NM_025370, intron 1 of 5) CpG 315 NM_025370 66129 Mm.491110 NM_025370 ENSMUSG00000021482 Aaed1 1110018J18Rik|AI849003 AhpC/TSA antioxidant enzyme domain containing 1 protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758 chr1 43165115 43165522 + 0.304839791830758 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) -1357 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-7 chr19 43551581 43551989 + 0.304839791830758 NA Intergenic Intergenic -27180 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-5 chr14 8172586 8172893 + 0.304839791830758 NA intron (NM_024221, intron 2 of 9) CpG 253 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-3 chr14 25483666 25484050 + 0.304839791830758 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 24673 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-6 chr16 57421170 57421555 + 0.304839791830758 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 68085 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-8 chr3 34080935 34081265 + 0.304839791830758 NA intron (NM_001026211, intron 1 of 5) intron (NM_001026211, intron 1 of 5) 254 NM_001026211 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-2 chr12 51970799 51971206 + 0.304839791830758 NA intron (NM_177171, intron 1 of 35) CpG 319 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding common_peak2_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-4 chr16 10973815 10974249 + 0.304839791830758 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 19089 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-10 chr7 110702483 110702812 + 0.304839791830758 NA Intergenic Intergenic -65559 NM_001276301 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak1_34_28_-0.00662500258176824_4.85466849383669_0.304839791830758-3 chr1 88995394 88995956 + 0.304839791830758 NA Intergenic Intergenic -20438 NR_040471 73475 Mm.491040 NR_040471 ENSMUSG00000099378 1700067G17Rik - RIKEN cDNA 1700067G17 gene ncRNA common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-9 chr5 53267142 53267670 + 0.304839791830752 NA intron (NM_001145433, intron 1 of 2) CpG 300 NM_001145433 66278 Mm.27900 NM_001145433 ENSMUSG00000061461 Smim20 1110067B18Rik|1810013D10Rik|N28078 small integral membrane protein 20 protein-coding unique_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-2 chr17 66351602 66351979 + 0.304839791830752 NA intron (NM_172963, intron 10 of 13) intron (NM_172963, intron 10 of 13) 97960 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-3 chr13 32802126 32802555 + 0.304839791830752 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 310 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752 chr11 51855778 51856297 + 0.304839791830752 NA intron (NM_001357588, intron 1 of 12) intron (NM_001357588, intron 1 of 12) 1444 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-12 chr8 94979844 94980252 + 0.304839791830752 NA intron (NM_001198894, intron 1 of 13) intron (NM_001198894, intron 1 of 13) 2939 NM_001198894 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752 chr10 17727455 17727897 + 0.304839791830752 NA Intergenic Intergenic 4448 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-4 chr13 102899744 102899964 + 0.304839791830752 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 139599 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-11 chr7 68748794 68749250 + 0.304839791830752 NA exon (NM_025549, exon 1 of 5) exon (NM_025549, exon 1 of 5) 216 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-2 chr6 98949219 98949806 + 0.304839791830752 NA intron (NM_001197321, intron 11 of 17) intron (NM_001197321, intron 11 of 17) 78786 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-3 chr5 30905269 30905859 + 0.304839791830752 NA TTS (NM_024460) TTS (NM_024460) 2224 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-8 chr4 130176919 130177190 + 0.304839791830752 NA Intergenic Intergenic -1932 NM_023476 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding unique_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752 chr16 11203486 11204000 + 0.304839791830752 NA promoter-TSS (NM_025546) promoter-TSS (NM_025546) 360 NR_038156 69918 Mm.440400 NR_038154 2610020C07Rik - RIKEN cDNA 2610020C07 gene ncRNA common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-2 chr13 16738783 16739338 + 0.304839791830752 NA Intergenic Intergenic -715637 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-7 chr4 94556255 94556692 + 0.304839791830752 NA exon (NM_026368, exon 1 of 6) exon (NM_026368, exon 1 of 6) 323 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-10 chr7 64391830 64392130 + 0.304839791830752 NA promoter-TSS (NM_001355124) promoter-TSS (NM_001355124) 256 NM_026483 67973 Mm.26973 NM_026483 ENSMUSG00000030521 Mphosph10 2810453H10Rik|5730405D16Rik|AI326008 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) protein-coding common_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-3 chr8 111299845 111300109 + 0.304839791830752 NA intron (NM_146218, intron 1 of 12) CpG 245 NM_146218 234736 Mm.334816 NM_146218 ENSMUSG00000033596 Rfwd3 BC027246 ring finger and WD repeat domain 3 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-5 chr14 66296577 66297197 + 0.304839791830752 NA promoter-TSS (NM_029979) promoter-TSS (NM_029979) -138 NM_029979 66854 Mm.43871 NM_029979 ENSMUSG00000022043 Trim35 0710005M05Rik|A430106H13Rik|AW046487|HLS5|Mair|NC8|mKIAA1098 tripartite motif-containing 35 protein-coding common_peak1_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-4 chr9 106247490 106247874 + 0.304839791830752 NA promoter-TSS (NM_001291835) promoter-TSS (NM_001291835) 48 NM_001291835 11655 Mm.290578 NM_020559 ENSMUSG00000032786 Alas1 ALAS|ALAS-N|Alas-1|Alas-h aminolevulinic acid synthase 1 protein-coding common_peak2_33_29_-0.0970597382720673_4.85836072647249_0.304839791830752-6 chr19 17012181 17012593 + 0.304839791830752 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 56269 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak1_140_113_0.014551911791524_6.8401659700605_0.304839645239952-2 chr5 41707030 41708470 + 0.304839645239952 NA promoter-TSS (NM_001310592) promoter-TSS (NM_001310592) -59 NM_001310592 100972 Mm.41555 NM_027295 ENSMUSG00000029128 Rab28 2700023P08Rik|AW496496 RAB28, member RAS oncogene family protein-coding common_peak1_140_113_0.014551911791524_6.8401659700605_0.304839645239952 chr15 76477462 76478757 + 0.304839645239952 NA promoter-TSS (NM_013481) promoter-TSS (NM_013481) 747 NR_138589 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185|HSTF|HSTF 1|Hsf1alpha|Hsf1beta heat shock factor 1 protein-coding common_peak2_140_117_-0.0352011234055762_6.86504248765905_0.304773959985189 chr4 133625393 133626794 + 0.304773959985189 NA intron (NM_001017968, intron 2 of 7) intron (NM_001017968, intron 2 of 7) 7336 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak2_144_116_0.0171502209744974_6.87893983007065_0.304741959507459 chr11 120229606 120231555 + 0.304741959507459 NA non-coding (NR_151480, exon 2 of 2) non-coding (NR_151480, exon 2 of 2) 1037 NR_151480 102640779 Mm.394084 NM_175248 2900052L18Rik - RIKEN cDNA 2900052L18 gene ncRNA common_peak1_144_116_0.0171502209744974_6.87893983007065_0.304741959507459 chr17 15825397 15827065 + 0.304741959507459 NA 5' UTR (NM_178615, exon 1 of 3) 5' UTR (NM_178615, exon 1 of 3) 355 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-8 chr3 145891161 145891626 + 0.304710633611964 NA intron (NM_026993, intron 5 of 5) intron (NM_026993, intron 5 of 5) -32869 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-10 chr6 91687480 91688148 + 0.304710633611964 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 3747 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964 chr1 74587758 74588070 + 0.304710633611964 NA promoter-TSS (NM_025784) promoter-TSS (NM_025784) 114 NM_029888 77264 Mm.207298 NM_029888 ENSMUSG00000026135 Zfp142 9330177B18Rik|BB154236|mKIAA0236 zinc finger protein 142 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-3 chr10 22148346 22148750 + 0.304710633611964 NA exon (NM_001254744, exon 1 of 2) exon (NM_001254744, exon 1 of 2) 722 NM_001254744 319887 Mm.177746 NM_001254744 ENSMUSG00000097327 E030030I06Rik - RIKEN cDNA E030030I06 gene protein-coding unique_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964 chr7 112144614 112145362 + 0.304710633611964 NA intron (NM_001360261, intron 3 of 6) intron (NM_001360261, intron 3 of 6) 13708 NM_001360260 50781 Mm.55143 NM_015814 ENSMUSG00000030772 Dkk3 AW061014|C87148|dkk-3|mDkk-3 dickkopf WNT signaling pathway inhibitor 3 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-10 chr7 89664563 89664990 + 0.304710633611964 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 31958 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-6 chr2 32173939 32174466 + 0.304710633611964 NA intron (NM_172661, intron 1 of 29) intron (NM_172661, intron 1 of 29) 23054 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-8 chr5 53102404 53102939 + 0.304710633611964 NA Intergenic Intergenic 53318 NM_011402 20531 Mm.284891 NM_011402 ENSMUSG00000029188 Slc34a2 AA536683|D5Ertd227e|NaPi-2b|Npt2b solute carrier family 34 (sodium phosphate), member 2 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-12 chr9 15237741 15238223 + 0.304710633611964 NA Intergenic Intergenic -1063 NM_026955 69137 Mm.41396 NM_026955 ENSMUSG00000031937 Vstm5 2200002K05Rik V-set and transmembrane domain containing 5 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-4 chr16 11908824 11909359 + 0.304710633611964 NA intron (NR_033509, intron 2 of 2) intron (NR_033509, intron 2 of 2) 332 NM_146067 223978 Mm.86360 NM_146067 ENSMUSG00000065979 Cpped1 C530044N13Rik calcineurin-like phosphoesterase domain containing 1 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-9 chr6 34743399 34744177 + 0.304710633611964 NA intron (NM_145575, intron 2 of 11) intron (NM_145575, intron 2 of 11) 34344 NM_145575 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-5 chr19 38223425 38223841 + 0.304710633611964 NA intron (NM_001081075, intron 1 of 13) intron (NM_001081075, intron 1 of 13) 499 NM_001081075 70567 Mm.30607 NM_001081075 ENSMUSG00000054237 Fra10ac1 5730455O13Rik|AI448293 FRA10AC1 homolog (human) protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-7 chr2 83710365 83710801 + 0.304710633611964 NA Intergenic Intergenic -13814 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-2 chr11 58021542 58022161 + 0.304710633611964 NA intron (NM_028451, intron 1 of 18) intron (NM_028451, intron 1 of 18) 12787 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-7 chr3 108013466 108014079 + 0.304710633611964 NA intron (NM_010358, intron 7 of 7) intron (NM_010358, intron 7 of 7) 4201 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-6 chr3 95650848 95651390 + 0.304710633611964 NA Intergenic Intergenic -7602 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-13 chr9 56951019 56951472 + 0.304710633611964 NA intron (NM_178374, intron 1 of 8) intron (NM_178374, intron 1 of 8) 321 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-11 chr9 108797088 108797522 + 0.304710633611964 NA intron (NM_029634, intron 1 of 5) intron (NM_029634, intron 1 of 5) 1311 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-2 chr1 111864291 111864845 + 0.304710633611964 NA 5' UTR (NM_001081316, exon 1 of 2) 5' UTR (NM_001081316, exon 1 of 2) 350 NM_001081316 319901 Mm.103468 NM_001081316 ENSMUSG00000038702 Dsel 9330132E09Rik|DS-epi2 dermatan sulfate epimerase-like protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-11 chr7 130546928 130547336 + 0.304710633611964 NA exon (NM_001162855, exon 1 of 11) exon (NM_001162855, exon 1 of 11) 249 NM_001162855 67872 Mm.21714 NM_001162855 ENSMUSG00000040331 Nsmce4a 2410003A14Rik NSE4 homolog A, SMC5-SMC6 complex component protein-coding common_peak1_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-9 chr5 138255896 138256452 + 0.304710633611964 NA intron (NM_001081108, intron 1 of 3) intron (NM_001081108, intron 1 of 3) 692 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-5 chr2 137728802 137729172 + 0.304710633611964 NA Intergenic Intergenic -527597 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964 chr11 32398824 32399344 + 0.304710633611964 NA intron (NM_177364, intron 6 of 12) intron (NM_177364, intron 6 of 12) 51273 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-3 chr16 16896718 16897357 + 0.304710633611964 NA intron (NM_176833, intron 1 of 7) intron (NM_176833, intron 1 of 7) 568 NM_176833 68606 Mm.230296 NM_176833 ENSMUSG00000026181 Ppm1f 1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015 protein phosphatase 1F (PP2C domain containing) protein-coding common_peak2_35_29_-0.0151793469358141_4.89930092214061_0.304710633611964-4 chr19 46622677 46623046 + 0.304710633611964 NA promoter-TSS (NM_001177813) promoter-TSS (NM_001177813) -540 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-8 chr3 61364051 61364401 + 0.304710633611958 NA promoter-TSS (NM_028712) promoter-TSS (NM_028712) -281 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-8 chr4 62704272 62704920 + 0.304710633611958 NA Intergenic Intergenic 30622 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-3 chr13 43480190 43480586 + 0.304710633611958 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 585 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-7 chr3 144090023 144090476 + 0.304710633611958 NA Intergenic Intergenic 112083 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-9 chr5 65107576 65107990 + 0.304710633611958 NA 5' UTR (NM_001347355, exon 1 of 11) 5' UTR (NM_001347355, exon 1 of 11) 215 NM_001347355 71778 Mm.10281 NM_175174 ENSMUSG00000054920 Klhl5 1300013C10Rik kelch-like 5 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-5 chr16 97961793 97962007 + 0.304710633611958 NA intron (NM_175428, intron 1 of 2) intron (NM_175428, intron 1 of 2) 722 NM_001081685 114565 Mm.474489 NM_175428 ENSMUSG00000046962 Zbtb21 5430437K12Rik|B430213I24Rik|Zfp295|Znf295|mKIAA1227 zinc finger and BTB domain containing 21 protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-2 chr11 69662063 69662575 + 0.304710633611958 NA promoter-TSS (NR_035455) promoter-TSS (NR_035455) 330 NR_125917 24070 Mm.89579 NM_011900 ENSMUSG00000018761 Mpdu1 LEC35|SL15|Supl15h mannose-P-dolichol utilization defect 1 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-2 chr11 70687461 70688094 + 0.304710633611958 NA TTS (NM_001252485) TTS (NM_001252485) 328 NM_001190376 216874 Mm.473726 NM_178116 ENSMUSG00000040712 Camta2 Kiaa0909-hp|mKIAA0909 calmodulin binding transcription activator 2 protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-6 chr18 10468110 10468775 + 0.304710633611958 NA intron (NM_001083628, intron 4 of 32) B1_Mur4|SINE|Alu 141910 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-3 chr11 121236748 121237014 + 0.304710633611958 NA promoter-TSS (NM_026272) promoter-TSS (NM_026272) -355 NM_026272 67608 Mm.291832 NM_026272 ENSMUSG00000000056 Narf 4430402O11Rik nuclear prelamin A recognition factor protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-9 chr4 101647795 101648076 + 0.304710633611958 NA intron (NM_175036, intron 1 of 3) CpG 152 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-4 chr16 34958287 34958852 + 0.304710633611958 NA intron (NR_045722, intron 1 of 2) intron (NR_045722, intron 1 of 2) 295 NR_045722 278725 Mm.436927 NR_045722 E130310I04Rik A930019C19Rik RIKEN cDNA E130310I04 gene ncRNA common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-4 chr13 43480201 43480602 + 0.304710633611958 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 572 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-6 chr17 32321425 32321854 + 0.304710633611958 NA promoter-TSS (NR_131218) promoter-TSS (NR_131218) -401 NR_131218 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-5 chr17 75466316 75466712 + 0.304710633611958 NA intron (NM_001360103, intron 1 of 16) intron (NM_001360103, intron 1 of 16) 976 NM_207246 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak2_34_30_-0.102840317841071_4.90277615146634_0.304710633611958 chr1 79470334 79470896 + 0.304710633611958 NA Intergenic Intergenic -30525 NM_001310680 20254 Mm.5038 NM_009129 ENSMUSG00000050711 Scg2 Chgc|SgII secretogranin II protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958-7 chr2 180453137 180453620 + 0.304710633611958 NA Intergenic Intergenic -2867 NM_001355218 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_34_30_-0.102840317841071_4.90277615146634_0.304710633611958 chr1 42851259 42851644 + 0.304710633611958 NA intron (NM_023514, intron 1 of 10) CpG 218 NM_023514 69527 Mm.252982 NM_023514 ENSMUSG00000060679 Mrps9 2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637 mitochondrial ribosomal protein S9 protein-coding common_peak1_142_119_-0.0392720423473856_6.88725457443483_0.30471050143041 chr4 109977392 109978781 + 0.30471050143041 NA promoter-TSS (NM_172296) promoter-TSS (NM_172296) 61 NM_172296 242620 Mm.32825 NM_172296 ENSMUSG00000047143 Dmrta2 Dmrt5 doublesex and mab-3 related transcription factor like family A2 protein-coding common_peak2_330_266_0.00919640896139917_8.06529413616826_0.304682959048186 chr8 33927496 33930690 + 0.304682959048186 NA intron (NM_001042675, intron 1 of 6) intron (NM_001042675, intron 1 of 6) 770 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_146_122_-0.0353757393189751_6.92482663567975_0.304619247117288 chr19 38024373 38025290 + 0.304619247117288 NA intron (NM_001302140, intron 1 of 53) MIR|SINE|MIR 18746 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-10 chr8 122431791 122432331 + 0.304589945962371 NA intron (NM_001301284, intron 1 of 4) intron (NM_001301284, intron 1 of 4) 879 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-5 chr2 129263575 129264123 + 0.304589945962371 NA Intergenic Intergenic 33363 NM_181589 70466 Mm.45785 NM_181589 ENSMUSG00000048327 Ckap2l 2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm cytoskeleton associated protein 2-like protein-coding unique_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371 chr10 80701448 80701840 + 0.304589945962371 NA intron (NM_172457, intron 1 of 3) intron (NM_172457, intron 1 of 3) 176 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-5 chr2 164497098 164497700 + 0.304589945962371 NA promoter-TSS (NM_133779) promoter-TSS (NM_133779) -126 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-6 chr4 45513571 45514078 + 0.304589945962371 NA intron (NM_001033306, intron 1 of 5) intron (NM_001033306, intron 1 of 5) 17004 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-2 chr11 117654835 117655208 + 0.304589945962371 NA intron (NM_198022, intron 1 of 21) CpG 732 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-2 chr11 76217143 76217547 + 0.304589945962371 NA promoter-TSS (NM_021294) promoter-TSS (NM_021294) 227 NM_177367 276919 Mm.482713 NM_177367 ENSMUSG00000049396 Gemin4 4932415L08Rik|AU015359 gem nuclear organelle associated protein 4 protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371 chr1 42851300 42851650 + 0.304589945962371 NA intron (NM_023514, intron 1 of 10) CpG 242 NM_023514 69527 Mm.252982 NM_023514 ENSMUSG00000060679 Mrps9 2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637 mitochondrial ribosomal protein S9 protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-7 chr4 132270233 132270534 + 0.304589945962371 NA promoter-TSS (NR_002865) promoter-TSS (NR_002865) -197 NR_002865 353373 Mm.424675 NR_002865 Rnu11 MBII-407|Mirn801|mir-801|mmu-mir-801 U11 small nuclear RNA snRNA common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-7 chr4 105225422 105226033 + 0.304589945962371 NA intron (NM_080555, intron 5 of 5) intron (NM_080555, intron 5 of 5) 68380 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-10 chr9 70229507 70229910 + 0.304589945962371 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 22358 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-11 chrX 73475461 73475970 + 0.304589945962371 NA Intergenic Intergenic -7886 NM_007542 12111 Mm.2608 NM_007542 ENSMUSG00000031375 Bgn BG|DSPG1|PG-S1|PGI|SLRR1A biglycan protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-4 chr18 61057282 61057767 + 0.304589945962371 NA intron (NM_008809, intron 1 of 22) intron (NM_008809, intron 1 of 22) 12374 NM_008809 18596 Mm.4146 NM_008809 ENSMUSG00000024620 Pdgfrb AI528809|CD140b|PDGFR-1|Pdgfr platelet derived growth factor receptor, beta polypeptide protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-9 chr5 136244623 136245306 + 0.304589945962371 NA promoter-TSS (NM_001302939) promoter-TSS (NM_001302939) -24 NM_018825 23921 Mm.425294 NM_018825 ENSMUSG00000005057 Sh2b2 Aps SH2B adaptor protein 2 protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-9 chr7 27166348 27166728 + 0.304589945962371 NA promoter-TSS (NM_001357767) promoter-TSS (NM_001357767) 264 NM_053208 112406 Mm.29978 NM_053208 ENSMUSG00000058709 Egln2 0610011A13Rik|C85656|Hif-p4h-1|Ier4|Phd1|SM-20 egl-9 family hypoxia-inducible factor 2 protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-8 chr5 21056357 21056663 + 0.304589945962371 NA promoter-TSS (NM_001356591) promoter-TSS (NM_001356591) -599 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-6 chr3 145702210 145702621 + 0.304589945962371 NA Intergenic Intergenic -52430 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-3 chr14 9458178 9458613 + 0.304589945962371 NA Intergenic Intergenic -425700 NR_030680 100042415 Mm.235938 NR_030680 ENSMUSG00000089686 Mnd1-ps Gm3833 Mnd1 retrotransposed pseudogene pseudo common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-3 chr17 40879827 40880491 + 0.304589945962371 NA exon (NM_027834, exon 1 of 2) exon (NM_027834, exon 1 of 2) 399 NM_027834 71583 Mm.158733 NM_027834 ENSMUSG00000054951 9130008F23Rik - RIKEN cDNA 9130008F23 gene protein-coding common_peak2_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-4 chr17 25271393 25271943 + 0.304589945962371 NA intron (NM_011665, intron 1 of 6) intron (NM_011665, intron 1 of 6) 1763 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371 chr1 21053087 21053407 + 0.304589945962371 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 25978 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_35_31_-0.108288751327295_4.94585562433635_0.304589945962371-8 chr5 149678016 149678445 + 0.304589945962371 NA promoter-TSS (NM_001081204) promoter-TSS (NM_001081204) -27 NM_001081204 381694 Mm.45060 NM_001081204 ENSMUSG00000051950 B3glct B3galtl|Gm1057 beta-3-glucosyltransferase protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-5 chr3 107829074 107829604 + 0.304589945962359 NA Intergenic Intergenic -47891 NM_133867 99662 Mm.108491 NM_133867 ENSMUSG00000040600 Eps8l3 AI504489|Eps8r3 EPS8-like 3 protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-8 chr8 13643871 13644184 + 0.304589945962359 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 33560 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-8 chr9 92266061 92266580 + 0.304589945962359 NA TTS (NR_105808) TTS (NR_105808) 1041 NR_105808 102465203 NR_105808 ENSMUSG00000098766 Mir6386 Gm27842|mmu-mir-6386 microRNA 6386 ncRNA common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-10 chr9 80165107 80165765 + 0.304589945962359 NA intron (NM_001039546, intron 1 of 32) intron (NM_001039546, intron 1 of 32) 402 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-6 chr7 3694598 3695064 + 0.304589945962359 NA exon (NM_001164205, exon 2 of 5) exon (NM_001164205, exon 2 of 5) 323 NM_024168 66078 Mm.379100 NM_024168 ENSMUSG00000035585 Tsen34 0610027F08Rik|Leng5 tRNA splicing endonuclease subunit 34 protein-coding common_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-3 chr3 57574273 57574658 + 0.304589945962359 NA intron (NM_133784, intron 2 of 6) intron (NM_133784, intron 2 of 6) 1411 NM_133784 97064 Mm.405029 NM_133784 ENSMUSG00000027803 Wwtr1 2310058J06Rik|2610021I22Rik|C78399|Taz WW domain containing transcription regulator 1 protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-7 chr7 98699343 98700080 + 0.304589945962359 NA non-coding (NR_144495, exon 1 of 1) non-coding (NR_144495, exon 1 of 1) 3217 NR_144495 100040769 Mm.126401 NR_144495 Gm15506 - predicted gene 15506 ncRNA common_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-2 chr14 61599314 61599830 + 0.304589945962359 NA promoter-TSS (NM_023233) promoter-TSS (NM_023233) 60 NM_023233 66597 Mm.491258 NM_023233 ENSMUSG00000035235 Trim13 3110001L12Rik|CAR|LEU5|RNF77|Rfp2 tripartite motif-containing 13 protein-coding common_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359 chr13 108228276 108228817 + 0.304589945962359 NA intron (NM_029001, intron 1 of 7) intron (NM_029001, intron 1 of 7) 14142 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-10 chr8 13531494 13531884 + 0.304589945962359 NA Intergenic Intergenic 30772 NM_025601 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-2 chr11 103094208 103094603 + 0.304589945962359 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 7253 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-3 chr11 104627737 104628375 + 0.304589945962359 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 20056 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359 chr8 70838869 70839422 + 0.304589945962359 NA exon (NM_027560, exon 1 of 8) exon (NM_027560, exon 1 of 8) 575 NM_027560 70807 Mm.24215 NM_027560 ENSMUSG00000002910 Arrdc2 4632416I05Rik|Ilad1 arrestin domain containing 2 protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-5 chr16 35871021 35871375 + 0.304589945962359 NA exon (NM_001039530, exon 1 of 17) exon (NM_001039530, exon 1 of 17) 184 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-3 chr12 25097737 25098229 + 0.304589945962359 NA Intergenic Intergenic -1891 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-8 chr2 134643765 134644078 + 0.304589945962359 NA exon (NM_029148, exon 1 of 8) exon (NM_029148, exon 1 of 8) 200 NM_029148 52837 Mm.264096 NM_029148 ENSMUSG00000034723 Tmx4 2810417D04Rik|4930500L08Rik|AI843224|AW046784|D2Bwg1356e|Txndc13|mKIAA1162 thioredoxin-related transmembrane protein 4 protein-coding common_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-4 chr4 83416955 83417449 + 0.304589945962359 NA promoter-TSS (NR_152448) promoter-TSS (NR_152448) -522 NR_152449 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding unique_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359 chr11 48837212 48837940 + 0.304589945962359 NA exon (NM_001347446, exon 1 of 7) exon (NM_001347446, exon 1 of 7) 105 NM_001347446 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-9 chr5 100636782 100637133 + 0.304589945962359 NA Intergenic Intergenic 37299 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-4 chr15 57752577 57753079 + 0.304589945962359 NA intron (NM_199449, intron 1 of 3) intron (NM_199449, intron 1 of 3) 58161 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-6 chr17 35836724 35837275 + 0.304589945962359 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 1302 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359 chr1 120121396 120122081 + 0.304589945962359 NA promoter-TSS (NM_007830) promoter-TSS (NM_007830) 551 NM_001172074 73103 Mm.271602 NM_028439 ENSMUSG00000026388 3110009E18Rik - RIKEN cDNA 3110009E18 gene protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-2 chr11 96034988 96035357 + 0.304589945962359 NA intron (NM_001356362, intron 1 of 6) intron (NM_001356362, intron 1 of 6) 287 NM_001356362 27681 Mm.372235 NM_033568 ENSMUSG00000006058 Snf8 D11Moh34 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-4 chr18 66223329 66223831 + 0.304589945962359 NA intron (NM_178793, intron 2 of 10) RSINE1|SINE|B4 -4247 NR_030467 751558 NR_030467 ENSMUSG00000076147 Mir694 Mirn694|mir-694|mmu-mir-694 microRNA 694 ncRNA common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-11 chr8 36993676 36993966 + 0.304589945962359 NA exon (NM_001039220, exon 1 of 1) exon (NM_001039220, exon 1 of 1) 246 NM_001039220 621080 Mm.373292 NM_001039220 ENSMUSG00000074384 AI429214 - expressed sequence AI429214 protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-7 chr7 28311563 28312024 + 0.304589945962359 NA intron (NM_025616, intron 1 of 10) intron (NM_025616, intron 1 of 10) 253 NM_025616 66525 Mm.167913 NM_025616 ENSMUSG00000003438 Timm50 2810403L02Rik|AU015082|TIM50L translocase of inner mitochondrial membrane 50 protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-5 chr17 43568062 43568542 + 0.304589945962359 NA promoter-TSS (NM_013737) promoter-TSS (NM_013737) -149 NM_013737 27226 Mm.9277 NM_013737 ENSMUSG00000023913 Pla2g7 PAF-AH|R75400 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) protein-coding common_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-6 chr9 77750984 77751340 + 0.304589945962359 NA Intergenic Intergenic -3373 NR_151778 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-7 chr2 33220881 33221283 + 0.304589945962359 NA intron (NM_011923, intron 1 of 4) intron (NM_011923, intron 1 of 4) 5121 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-3 chr17 46327593 46327956 + 0.304589945962359 NA exon (NM_170680, exon 1 of 21) exon (NM_170680, exon 1 of 21) 249 NM_001347396 224814 Mm.76543 NM_145140 ENSMUSG00000032842 Abcc10 Mrp7|mFLJ00002 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 protein-coding common_peak1_36_30_-0.023235569329433_4.94257852572216_0.304589945962359 chr10 19148840 19149178 + 0.304589945962359 NA intron (NR_038021, intron 1 of 3) LTR33|LTR|ERVL 7260 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-11 chr9 96785132 96785498 + 0.304589945962359 NA Intergenic Intergenic 19753 NR_102296 319707 Mm.392191 NR_102293 ENSMUSG00000101581 C430002N11Rik - RIKEN cDNA C430002N11 gene ncRNA common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-4 chr16 91762753 91763178 + 0.304589945962359 NA intron (NM_001110276, intron 1 of 15) intron (NM_001110276, intron 1 of 15) 33594 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-6 chr4 3874829 3875185 + 0.304589945962359 NA Intergenic CpG -2902 NM_020021 17451 Mm.459300 NM_020021 ENSMUSG00000078365 Mos c-mos Moloney sarcoma oncogene protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359-9 chr8 83698674 83699062 + 0.304589945962359 NA intron (NM_177262, intron 1 of 21) CpG 311 NM_177262 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding common_peak2_36_30_-0.023235569329433_4.94257852572216_0.304589945962359 chr10 78351701 78351958 + 0.304589945962359 NA promoter-TSS (NM_053014) promoter-TSS (NM_053014) -129 NM_053014 28169 Mm.141230 NM_053014 ENSMUSG00000001211 Agpat3 AW061257|AW493985|D10Jhu12e|lpaat3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding common_peak2_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-5 chr6 42692448 42692892 + 0.304589945962359 NA intron (NM_001355769, intron 1 of 8) intron (NM_001355769, intron 1 of 8) 430 NM_029930 77574 Mm.24652 NM_029930 ENSMUSG00000036667 Tcaf1 2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a TRPM8 channel-associated factor 1 protein-coding common_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-2 chr1 136683509 136683858 + 0.304589945962359 NA promoter-TSS (NR_045325) promoter-TSS (NR_045325) 54 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA unique_peak1_37_30_0.0149671441582724_4.96167988246601_0.304589945962359-2 chr17 37046153 37046578 + 0.304589945962359 NA intron (NM_019439, intron 1 of 22) CpG 399 NM_019439 54393 Mm.32191 NM_019439 ENSMUSG00000024462 Gabbr1 GABAB1|GABAbR1|bM573K1.1 gamma-aminobutyric acid (GABA) B receptor, 1 protein-coding common_peak1_147_123_-0.037345528475921_6.93552354614891_0.304589826361751 chr4 147903737 147905525 + 0.304589826361751 NA promoter-TSS (NM_001285923) promoter-TSS (NM_001285923) 30 NM_001355590 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak1_148_124_-0.0392868881368207_6.94614084059368_0.30456088400862 chr1 152901892 152903143 + 0.30456088400862 NA exon (NM_001160256, exon 1 of 23) exon (NM_001160256, exon 1 of 23) 128 NM_001359257 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_148_124_-0.0392868881368207_6.94614084059368_0.30456088400862 chr18 68156325 68157474 + 0.30456088400862 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -71047 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_149_124_-0.0297047998555682_6.9509318847343_0.30456088400862 chr15 102404682 102405595 + 0.30456088400862 NA Intergenic Intergenic -1178 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_151_122_0.0125389900594186_6.94878400036895_0.30456088400862 chr2 130178069 130179350 + 0.30456088400862 NA intron (NM_009225, intron 1 of 6) intron (NM_009225, intron 1 of 6) 655 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding common_peak2_341_281_-0.022826652545227_8.12813802612618_0.304526121871573 chr3 108410123 108412543 + 0.304526121871573 NA intron (NM_001004177, intron 1 of 33) intron (NM_001004177, intron 1 of 33) 4161 NM_017392 53883 Mm.39728 NM_017392 ENSMUSG00000068740 Celsr2 Adgrc2|EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1 cadherin, EGF LAG seven-pass G-type receptor 2 protein-coding common_peak1_153_124_0.00799518793585818_6.96978187863002_0.304504388580048 chr11 96282959 96284926 + 0.304504388580048 NA intron (NM_010461, intron 1 of 1) intron (NM_010461, intron 1 of 1) 2037 NM_010461 15416 Mm.4822 NM_010461 ENSMUSG00000056648 Hoxb8 Hox-2.4 homeobox B8 protein-coding common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-3 chr11 118024497 118025090 + 0.304476922018591 NA TTS (NM_133757) TTS (NM_133757) 22523 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-3 chr11 115970503 115971081 + 0.304476922018591 NA Intergenic B4|SINE|B4 -3933 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-4 chr19 42129269 42129760 + 0.304476922018591 NA promoter-TSS (NM_027106) promoter-TSS (NM_027106) -521 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-11 chr2 181525819 181526346 + 0.304476922018591 NA intron (NM_001271584, intron 2 of 5) intron (NM_001271584, intron 2 of 5) 5597 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-8 chr5 129669772 129670337 + 0.304476922018591 NA promoter-TSS (NM_172462) promoter-TSS (NM_172462) 34 NM_172462 22648 Mm.135067 NM_172462 ENSMUSG00000051034 Zfp11 6720465D24|Krox-6|Zfp-11 zinc finger protein 11 protein-coding common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-4 chr14 121378572 121379000 + 0.304476922018591 NA intron (NM_145465, intron 1 of 10) CpG 444 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-3 chr2 29711257 29711960 + 0.304476922018591 NA intron (NM_001039086, intron 11 of 25) intron (NM_001039086, intron 11 of 25) -49920 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 - predicted gene 13547 protein-coding common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-2 chr10 88147026 88147380 + 0.304476922018591 NA promoter-TSS (NM_029249) promoter-TSS (NM_029249) 132 NM_028334 69736 Mm.222184 NM_027191 ENSMUSG00000035351 Nup37 2410003L22Rik|2810039M17Rik nucleoporin 37 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-4 chr13 54100692 54101006 + 0.304476922018591 NA intron (NM_027324, intron 8 of 10) intron (NM_027324, intron 8 of 10) 29004 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-8 chr7 105953207 105953896 + 0.304476922018591 NA intron (NM_001243039, intron 1 of 3) intron (NM_001243039, intron 1 of 3) 416 NM_001243040 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591 chr11 6178807 6179420 + 0.304476922018591 NA intron (NM_173748, intron 2 of 5) intron (NM_173748, intron 2 of 5) -5782 NR_029471 100042173 Mm.441799 NR_029471 Rps15a-ps6 Gm11968 ribosomal protein S15A, pseudogene 6 pseudo common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-6 chr6 50378678 50378912 + 0.304476922018591 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 4042 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591 chr6 87838282 87838701 + 0.304476922018591 NA intron (NM_133934, intron 1 of 10) intron (NM_133934, intron 1 of 10) 268 NM_133934 57905 Mm.241546 NM_133934 ENSMUSG00000030056 Isy1 5830446M03Rik|AI181014|AU020769 ISY1 splicing factor homolog protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-10 chr9 46283146 46283483 + 0.304476922018591 NA TTS (NM_011752) TTS (NM_011752) 302 NM_146000 215051 Mm.32648 NM_146000 ENSMUSG00000032077 Bud13 AV305342|D030060M11Rik BUD13 homolog protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-13 chrX 150478071 150478327 + 0.304476922018591 NA Intergenic Intergenic -19049 NR_152724 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-6 chr4 32250650 32250986 + 0.304476922018591 NA Intergenic Intergenic -166617 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-7 chr17 25757245 25757743 + 0.304476922018591 NA Intergenic Intergenic -3116 NM_001356286 56047 Mm.17510 NM_018857 ENSMUSG00000063011 Msln MPF mesothelin protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-9 chr6 71933662 71934139 + 0.304476922018591 NA intron (NM_009088, intron 12 of 33) intron (NM_009088, intron 12 of 33) 24847 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-2 chr1 175625115 175625477 + 0.304476922018591 NA intron (NM_010209, intron 1 of 9) CpG 339 NM_010209 14194 Mm.41502 NM_010209 ENSMUSG00000026526 Fh1 Fh|Fh-1 fumarate hydratase 1 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-10 chr2 167348403 167349051 + 0.304476922018591 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 451 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-2 chr11 4292239 4292774 + 0.304476922018591 NA Intergenic Intergenic 25710 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591 chr18 63150756 63151313 + 0.304476922018591 NA intron (NM_001039485, intron 5 of 53) intron (NM_001039485, intron 5 of 53) 173118 NM_028017 108123 Mm.292687 NM_028017 ENSMUSG00000024581 Napg 2400003O04Rik|SNARE N-ethylmaleimide sensitive fusion protein attachment protein gamma protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-7 chr2 92009419 92009793 + 0.304476922018591 NA intron (NM_011957, intron 1 of 11) intron (NM_011957, intron 1 of 11) 14564 NM_011957 26427 Mm.10353 NM_011957 ENSMUSG00000027230 Creb3l1 Oasis cAMP responsive element binding protein 3-like 1 protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591 chr1 89124602 89125070 + 0.304476922018591 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 54421 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-11 chr9 13245318 13245842 + 0.304476922018591 NA exon (NM_001033181, exon 1 of 1) exon (NM_001033181, exon 1 of 1) 161 NM_001033181 77532 Mm.459434 NM_001033181 ENSMUSG00000079083 Jrkl C030035D04Rik|HHMJG Jrk-like protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-4 chr2 84743358 84743706 + 0.304476922018591 NA Intergenic CpG -2354 NR_029544 387149 NR_029544 ENSMUSG00000065484 Mir130a Mirn130|Mirn130a|mir-130a microRNA 130a ncRNA common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-5 chr17 65885350 65885774 + 0.304476922018591 NA promoter-TSS (NM_001198949) promoter-TSS (NM_001198949) 193 NM_009067 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-10 chr7 145283554 145283892 + 0.304476922018591 NA intron (NR_132643, intron 1 of 22) PB1D10|SINE|Alu 288 NR_132644 233979 Mm.102235 NM_146206 ENSMUSG00000048677 Tpcn2 D830047E22Rik|Gm35086 two pore segment channel 2 protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-2 chr11 78178068 78178519 + 0.304476922018591 NA promoter-TSS (NR_106113) promoter-TSS (NR_106113) 144 NM_001291237 68385 Mm.390375 NM_026708 ENSMUSG00000019437 Tlcd1 - TLC domain containing 1 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-8 chr19 16254887 16255185 + 0.304476922018591 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 59968 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-7 chr3 116006893 116007302 + 0.304476922018591 NA promoter-TSS (NM_001163515) promoter-TSS (NM_001163515) 309 NM_023214 66500 Mm.34550 NM_023214 ENSMUSG00000054414 Slc30a7 1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591 chr10 80756637 80757043 + 0.304476922018591 NA intron (NM_199322, intron 1 of 27) intron (NM_199322, intron 1 of 27) 1637 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-5 chr4 83301553 83302047 + 0.304476922018591 NA intron (NM_027238, intron 1 of 19) B1_Mm|SINE|Alu 22389 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591 chr1 45501067 45501606 + 0.304476922018591 NA intron (NM_007737, intron 1 of 53) intron (NM_007737, intron 1 of 53) 1946 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-2 chr11 101425172 101425451 + 0.304476922018591 NA promoter-TSS (NM_026865) promoter-TSS (NM_026865) 17 NM_001357574 73635 Mm.472804 NM_026865 ENSMUSG00000097487 Ptges3l 1110069E20Rik|1700113I22Rik prostaglandin E synthase 3 like protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-7 chr7 44496203 44496485 + 0.304476922018591 NA promoter-TSS (NM_028169) promoter-TSS (NM_028169) 169 NM_197991 69683 Mm.294759 NM_197991 ENSMUSG00000008140 Emc10 2310044H10Rik|5430410O10Rik|Inm02|Mirta22 ER membrane protein complex subunit 10 protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-6 chr3 53199951 53200484 + 0.304476922018591 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 158670 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-5 chr13 104459741 104460315 + 0.304476922018591 NA intron (NR_136938, intron 22 of 26) intron (NR_136938, intron 22 of 26) 172193 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-8 chr4 95917279 95917785 + 0.304476922018591 NA intron (NM_001113412, intron 14 of 15) intron (NM_001113412, intron 14 of 15) 49503 NR_045777 319247 Mm.473527 NM_175680 ENSMUSG00000044125 9530080O11Rik - RIKEN cDNA 9530080O11 gene ncRNA common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-4 chr12 17750109 17750632 + 0.304476922018591 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 59561 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVL-3|NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-12 chr7 28961669 28962039 + 0.304476922018591 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 478 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-3 chr17 45695099 45695757 + 0.304476922018591 NA intron (NM_026732, intron 1 of 2) intron (NM_026732, intron 1 of 2) 9079 NM_026732 68463 Mm.379158 NM_026732 ENSMUSG00000023939 Mrpl14 1110006I11Rik|AI846816|MRP-L32|Rpml32 mitochondrial ribosomal protein L14 protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-9 chr6 117716486 117717133 + 0.304476922018591 NA intron (NR_045731, intron 2 of 3) RLTR45-int|LTR|ERVK 34960 NR_045731 72263 Mm.443289 NR_045731 ENSMUSG00000099869 1700030F04Rik - RIKEN cDNA 1700030F04 gene ncRNA common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-3 chr11 119856966 119857285 + 0.304476922018591 NA intron (NM_028898, intron 18 of 33) intron (NM_028898, intron 18 of 33) -22760 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak2_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-7 chr4 141406991 141407433 + 0.304476922018591 NA exon (NM_019701, exon 16 of 20) exon (NM_019701, exon 16 of 20) -8506 NM_024412 12733 Mm.167900 NM_024412 ENSMUSG00000033770 Clcnka C75963|CLC-K1|Clcnk1 chloride channel, voltage-sensitive Ka protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-6 chr4 136141837 136142260 + 0.304476922018591 NA Intergenic Intergenic -1774 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-2 chr15 31235139 31235836 + 0.304476922018591 NA intron (NM_146057, intron 1 of 3) intron (NM_146057, intron 1 of 3) 11102 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-5 chr16 13358364 13358983 + 0.304476922018591 NA exon (NM_153588, exon 1 of 15) exon (NM_153588, exon 1 of 15) 252 NM_153588 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-3 chr11 32347289 32347620 + 0.304476922018591 NA promoter-TSS (NM_177364) promoter-TSS (NM_177364) -357 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-5 chr17 25016322 25017007 + 0.304476922018591 NA 5' UTR (NM_134126, exon 1 of 30) 5' UTR (NM_134126, exon 1 of 30) 578 NM_134126 106633 Mm.32802 NM_134126 ENSMUSG00000024169 Ift140 AI661311|Tce5|Wdtc2|mKIAA0590 intraflagellar transport 140 protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-6 chr2 31572844 31573232 + 0.304476922018591 NA intron (NM_001290548, intron 1 of 18) CpG 387 NM_001290548 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-9 chr7 111028496 111028881 + 0.304476922018591 NA promoter-TSS (NM_009431) promoter-TSS (NM_009431) -263 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding common_peak1_36_32_-0.113433378301012_4.98767743020795_0.304476922018591-4 chr12 84772432 84772803 + 0.304476922018591 NA promoter-TSS (NM_028863) promoter-TSS (NM_028863) 495 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 NPC intracellular cholesterol transporter 2 protein-coding common_peak1_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-7 chr4 149484707 149485127 + 0.304476922018591 NA promoter-TSS (NM_001356322) promoter-TSS (NM_001356322) 255 NM_001356357 66454 Mm.76062 NM_133435 ENSMUSG00000028992 Nmnat1 2610529L11Rik|5730441G13Rik|D4Cole1e|nmnat nicotinamide nucleotide adenylyltransferase 1 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591 chr1 163994891 163995434 + 0.304476922018591 NA promoter-TSS (NM_201364) promoter-TSS (NM_201364) 273 NM_001355132 69962 Mm.27284 NM_027279 ENSMUSG00000041396 Mettl18 2810422O20Rik|C78571 methyltransferase like 18 protein-coding common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591 chr1 78657969 78658429 + 0.304476922018591 NA promoter-TSS (NM_001136226) promoter-TSS (NM_001136226) -241 NM_001136226 195434 Mm.276016 NM_001001981 ENSMUSG00000079470 Utp14b 4932411L21Rik|jsd UTP14B small subunit processome component protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-9 chr2 164438535 164438972 + 0.304476922018591 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 4435 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-5 chr2 73584956 73585428 + 0.304476922018591 NA intron (NR_153820, intron 1 of 1) PB1D11|SINE|Alu 332 NR_153820 102633437 NR_153820 Chrna1os Gm13705|Gm31264 cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), opposite strand ncRNA common_peak2_37_32_-0.0752306648133061_5.0067787869518_0.304476922018591-10 chr8 121653241 121653662 + 0.304476922018591 NA Intergenic Intergenic -1518 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_38_31_0.00637377668256889_5.00318688834128_0.304476922018591-6 chr14 61439365 61439818 + 0.304476922018591 NA intron (NM_008466, intron 1 of 16) CpG 356 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding unique_peak1_38_31_0.00637377668256889_5.00318688834128_0.304476922018591 chr3 116861448 116862035 + 0.304476922018591 NA promoter-TSS (NM_009146) promoter-TSS (NM_009146) 61 NM_009146 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding common_peak1_152_127_-0.0355529177818825_6.98222354110906_0.30447681345167 chr10 96617092 96618316 + 0.30447681345167 NA intron (NM_007569, intron 1 of 1) CpG 703 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_155_125_0.0149838940361633_6.984771870518_0.30447681345167 chr12 70974623 70975536 + 0.30447681345167 NA intron (NM_011184, intron 1 of 10) CpG 456 NM_011184 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_152_127_-0.0355529177818825_6.98222354110906_0.30447681345167 chr5 147429688 147431076 + 0.30447681345167 NA 5' UTR (NM_001359433, exon 1 of 20) 5' UTR (NM_001359433, exon 1 of 20) 226 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak2_155_129_-0.0301039954923743_7.00731581528227_0.304422955819319 chr19 59467126 59468955 + 0.304422955819319 NA Intergenic Intergenic 9350 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak1_157_127_0.0105126867020324_7.00525634335102_0.304422955819319 chr2 127333525 127335574 + 0.304422955819319 NA Intergenic Intergenic -1610 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_157_127_0.0105126867020324_7.00525634335102_0.304422955819319-2 chr5 24404414 24406114 + 0.304422955819319 NA intron (NM_029020, intron 9 of 15) intron (NM_029020, intron 9 of 15) -8187 NM_183000 171209 Mm.299636 NM_183000 ENSMUSG00000038276 Asic3 AW742291|Accn3|DRASIC|SLNAC1|TNAC1 acid-sensing (proton-gated) ion channel 3 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-7 chr5 114897275 114898137 + 0.304370854244436 NA exon (NM_011854, exon 1 of 6) exon (NM_011854, exon 1 of 6) 772 NM_001359181 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-8 chr6 113483618 113484044 + 0.304370854244436 NA TTS (NM_134159) TTS (NM_134159) 475 NR_145485 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811|i11E7 cysteine-rich with EGF-like domains 1 protein-coding common_peak2_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-2 chr11 77216589 77217098 + 0.304370854244436 NA intron (NM_177710, intron 1 of 14) intron (NM_177710, intron 1 of 14) 418 NM_177710 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot protein phosphatase 2 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-9 chr9 107307353 107307923 + 0.304370854244436 NA Intergenic Intergenic 10979 NM_001317354 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436 chr13 34715732 34716309 + 0.304370854244436 NA Intergenic Intergenic -23622 NM_138746 108161 Mm.41991 NM_138746 ENSMUSG00000038246 Fam50b D0H6S2654E|X5L|XAP-5-like family with sequence similarity 50, member B protein-coding common_peak2_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436 chr1 43933237 43933542 + 0.304370854244436 NA promoter-TSS (NM_001310540) promoter-TSS (NM_001310540) -605 NM_001310540 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak2_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-3 chr12 52636425 52636935 + 0.304370854244436 NA Intergenic Intergenic -34358 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-3 chr17 78936632 78937047 + 0.304370854244436 NA promoter-TSS (NM_028611) promoter-TSS (NM_028611) 231 NM_001024806 12607 Mm.24169 NM_009882 ENSMUSG00000024081 Cebpz AI848081|CBF2|Cbf|Cebpa-rs1 CCAAT/enhancer binding protein zeta protein-coding common_peak2_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-4 chr15 11834107 11834498 + 0.304370854244436 NA Intergenic Intergenic 71372 NM_008728 18162 Mm.25259 NM_008728 ENSMUSG00000022206 Npr3 ANP-C|ANPR-C|EF-2|NPR-C|lgj|stri natriuretic peptide receptor 3 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-4 chr19 46152584 46153039 + 0.304370854244436 NA intron (NM_178930, intron 1 of 39) CpG 253 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak2_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-5 chr2 48949612 48949978 + 0.304370854244436 NA promoter-TSS (NM_001177313) promoter-TSS (NM_001177313) 286 NR_149355 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-5 chr2 48949600 48949962 + 0.304370854244436 NA promoter-TSS (NM_001177313) promoter-TSS (NM_001177313) 273 NM_029924 109241 Mm.440436 NM_029924 ENSMUSG00000036792 Mbd5 9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630 methyl-CpG binding domain protein 5 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-6 chr4 133130613 133130892 + 0.304370854244436 NA intron (NM_153423, intron 1 of 8) CpG 119 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-2 chr15 77823239 77823690 + 0.304370854244436 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 18711 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_38_33_-0.0810890645677702_5.04691830896645_0.304370854244436-6 chr4 74252049 74252439 + 0.304370854244436 NA intron (NM_001356561, intron 1 of 20) CpG 365 NM_001356561 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443 chr1 71764060 71764607 + 0.30437085424443 NA Intergenic Intergenic 110998 NR_040308 100042814 Mm.405775 NR_040308 ENSMUSG00000073652 Apol7d Gm15456 apolipoprotein L 7d ncRNA common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-2 chr16 4726387 4726877 + 0.30437085424443 NA intron (NM_001136066, intron 1 of 5) CpG 271 NM_001136066 15369 Mm.272866 NM_010443 ENSMUSG00000004070 Hmox2 HO-2|HO2 heme oxygenase 2 protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-5 chr16 15887186 15887817 + 0.30437085424443 NA exon (NM_007679, exon 1 of 1) exon (NM_007679, exon 1 of 1) 215 NM_007679 12609 Mm.347407 NM_007679 ENSMUSG00000071637 Cebpd c/EBPdelta CCAAT/enhancer binding protein (C/EBP), delta protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-7 chr7 111028513 111028902 + 0.30437085424443 NA promoter-TSS (NM_009431) promoter-TSS (NM_009431) -244 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-4 chr17 31305160 31305677 + 0.30437085424443 NA intron (NM_001242427, intron 2 of 19) intron (NM_001242427, intron 2 of 19) 9194 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-3 chr13 28737513 28738386 + 0.30437085424443 NA intron (NR_045053, intron 3 of 8) intron (NR_045053, intron 3 of 8) -27076 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA unique_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443 chr2 154517335 154517964 + 0.30437085424443 NA intron (NM_172860, intron 5 of 10) intron (NM_172860, intron 5 of 10) -31255 NM_029305 75480 Mm.440434 NM_029305 ENSMUSG00000038523 1700003F12Rik - RIKEN cDNA 1700003F12 gene protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-8 chr7 16208571 16208862 + 0.30437085424443 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 13277 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443 chr14 76508012 76508460 + 0.30437085424443 NA TTS (NM_001177751) TTS (NM_001177751) 3726 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-6 chr5 149526888 149527272 + 0.30437085424443 NA intron (NR_045423, intron 1 of 4) intron (NR_045423, intron 1 of 4) -1599 NM_029440 381693 Mm.136919 NM_029440 ENSMUSG00000029658 Wdr95 4930434E21Rik WD40 repeat domain 95 protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-3 chr17 28930284 28931022 + 0.30437085424443 NA Intergenic Intergenic 11609 NM_153390 69307 Mm.107605 NM_153390 ENSMUSG00000045378 Pxt1 1700001G18Rik|Stepp peroxisomal, testis specific 1 protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-2 chr1 135658580 135659337 + 0.30437085424443 NA Intergenic Intergenic -61105 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-6 chr4 95105900 95106464 + 0.30437085424443 NA Intergenic Intergenic -53960 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-8 chr8 78715249 78715836 + 0.30437085424443 NA intron (NM_001009981, intron 9 of 10) intron (NM_001009981, intron 9 of 10) 105610 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-7 chr5 34636290 34636786 + 0.30437085424443 NA intron (NM_026660, intron 2 of 12) intron (NM_026660, intron 2 of 12) 674 NM_001356978 68294 Mm.34564 NM_026660 ENSMUSG00000001082 Mfsd10 0610009O03Rik|Tetran major facilitator superfamily domain containing 10 protein-coding common_peak1_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-4 chr15 64365269 64365809 + 0.30437085424443 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 17380 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_39_32_-0.00175215596002332_5.04351804137844_0.30437085424443-5 chr3 153672081 153672964 + 0.30437085424443 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 52611 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak1_159_129_0.00616419122348777_7.0254499086402_0.304370755394625 chr11 96271442 96273193 + 0.304370755394625 NA intron (NM_008270, intron 1 of 1) CpG 987 NM_008270 15417 Mm.258271 NM_008270 ENSMUSG00000020875 Hoxb9 Hox-2.5 homeobox B9 protein-coding common_peak2_158_132_-0.0357317575771186_7.03741655671263_0.304345252914693 chr9 110531876 110533484 + 0.304345252914693 NA promoter-TSS (NM_001081340) promoter-TSS (NM_001081340) 83 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding common_peak1_160_133_-0.0286318186606325_7.05177328112746_0.30432013684714 chr4 155490598 155491986 + 0.30432013684714 NA promoter-TSS (NM_001160017) promoter-TSS (NM_001160017) -69 NM_001160017 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-10 chr8 22539155 22539638 + 0.304271119602326 NA intron (NM_011394, intron 3 of 10) intron (NM_011394, intron 3 of 10) 54417 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-2 chr13 49682190 49682782 + 0.304271119602326 NA intron (NM_172015, intron 1 of 33) intron (NM_172015, intron 1 of 33) 356 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-6 chr17 26601334 26601972 + 0.304271119602326 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 40141 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-5 chr19 24961237 24961567 + 0.304271119602326 NA non-coding (NR_033744, exon 1 of 15) non-coding (NR_033744, exon 1 of 15) 214 NR_033744 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-2 chr14 25531068 25531577 + 0.304271119602326 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -3117 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-4 chr15 64558565 64559012 + 0.304271119602326 NA Intergenic Intergenic -175869 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326 chr13 4248538 4248965 + 0.304271119602326 NA promoter-TSS (NR_028405) promoter-TSS (NR_028405) 16 NR_028405 111002 Mm.482672 NR_028405 Marcksl1-ps4 Gm16264|Mlp-rs4|Mrp-rs4 MARCKS-like 1, pseudogene 4 pseudo common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-8 chr2 117048785 117049324 + 0.304271119602326 NA Intergenic Intergenic -72017 NM_001277256 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak2_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-4 chr15 98048558 98049195 + 0.304271119602326 NA intron (NM_144851, intron 13 of 17) B1F|SINE|Alu -43713 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326 chr11 115708037 115708414 + 0.304271119602326 NA intron (NM_008163, intron 1 of 5) CpG 372 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-5 chr15 77916943 77917373 + 0.304271119602326 NA intron (NM_019913, intron 3 of 3) intron (NM_019913, intron 3 of 3) 11836 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-9 chr3 69045048 69045547 + 0.304271119602326 NA promoter-TSS (NM_025863) promoter-TSS (NM_025863) -555 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding unique_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326 chr7 19360467 19361005 + 0.304271119602326 NA promoter-TSS (NM_001010836) promoter-TSS (NM_001010836) -480 NM_001010836 333654 Mm.333640 NM_001010836 ENSMUSG00000040734 Ppp1r13l AV260376|IASPP|Nkip1|wa3 protein phosphatase 1, regulatory (inhibitor) subunit 13 like protein-coding common_peak2_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-6 chr8 11636616 11637167 + 0.304271119602326 NA Intergenic Intergenic -1134 NM_001281974 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak2_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-3 chr15 64558564 64559049 + 0.304271119602326 NA Intergenic Intergenic -175887 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-3 chr14 18270463 18270912 + 0.304271119602326 NA promoter-TSS (NM_001316711) promoter-TSS (NM_001316711) 294 NM_001359897 66480 Mm.2050 NM_025586 ENSMUSG00000012405 Rpl15 2510008H07Rik ribosomal protein L15 protein-coding common_peak1_39_34_-0.0866410535465363_5.0859624901717_0.304271119602326-7 chr18 83816663 83817195 + 0.304271119602326 NA Intergenic Intergenic 269633 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-11 chr7 123110505 123111074 + 0.30427111960232 NA Intergenic RSINE1|SINE|B4 -13096 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-8 chr2 163345279 163345899 + 0.30427111960232 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 52384 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-4 chr18 71216904 71217832 + 0.30427111960232 NA Intergenic Intergenic 649076 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232 chr11 113729289 113729913 + 0.30427111960232 NA 5' UTR (NM_020006, exon 2 of 2) 5' UTR (NM_020006, exon 2 of 2) -19584 NM_029794 52670 Mm.229207 NM_026682 ENSMUSG00000018727 Cpsf4l 0610010C04Rik|1500000C01Rik|D11Ertd636e cleavage and polyadenylation specific factor 4-like protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-7 chr2 152293877 152294223 + 0.30427111960232 NA intron (NM_024196, intron 1 of 7) CpG 178 NM_024196 67231 Mm.288733 NM_024196 ENSMUSG00000027465 Tbc1d20 1110028I04Rik|2810442O16Rik|AI414693|bs TBC1 domain family, member 20 protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-10 chr6 113237952 113238490 + 0.30427111960232 NA intron (NM_001362185, intron 1 of 16) intron (NM_001362185, intron 1 of 16) 378 NR_155433 97287 Mm.197816 NM_026849 ENSMUSG00000030269 Mtmr14 1110061O04Rik|AW553738|C76151 myotubularin related protein 14 protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-3 chr16 24514607 24515224 + 0.30427111960232 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -14399 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232 chr11 78383149 78383769 + 0.30427111960232 NA intron (NM_008238, intron 1 of 8) intron (NM_008238, intron 1 of 8) 3149 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-6 chr2 129198822 129199202 + 0.30427111960232 NA intron (NM_015747, intron 1 of 10) CpG 239 NM_001159593 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-3 chr15 62289155 62289876 + 0.30427111960232 NA Intergenic Intergenic -70064 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-12 chr7 142436942 142437417 + 0.30427111960232 NA intron (NM_001285861, intron 1 of 8) intron (NM_001285861, intron 1 of 8) 345 NM_001285861 55925 Mm.213002 NM_018802 ENSMUSG00000031098 Syt8 - synaptotagmin VIII protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-6 chr7 125552276 125552720 + 0.30427111960232 NA intron (NM_001008700, intron 1 of 10) CpG 216 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232 chr10 61648645 61649254 + 0.30427111960232 NA intron (NM_026438, intron 1 of 10) CpG 328 NM_026438 67895 Mm.28897 NM_026438 ENSMUSG00000020089 Ppa1 2010317E03Rik|Pyp pyrophosphatase (inorganic) 1 protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-8 chr8 119806787 119807223 + 0.30427111960232 NA Intergenic Intergenic -28589 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-4 chr18 6760333 6761055 + 0.30427111960232 NA Intergenic Intergenic -4473 NM_181070 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-7 chr8 70460038 70460387 + 0.30427111960232 NA intron (NM_178771, intron 1 of 2) intron (NM_178771, intron 1 of 2) 16731 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-2 chr11 96260625 96261100 + 0.30427111960232 NA intron (NR_037977, intron 1 of 2) intron (NR_037977, intron 1 of 2) -4302 NR_029721 387191 NR_029721 ENSMUSG00000065546 Mir196a-1 Mirn196|Mirn196a-1|miR-196|mir-196a-1 microRNA 196a-1 ncRNA common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-9 chr5 64866502 64867138 + 0.30427111960232 NA Intergenic Intergenic 63297 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-5 chr4 139248296 139248884 + 0.30427111960232 NA intron (NM_001037761, intron 2 of 9) intron (NM_001037761, intron 2 of 9) 54479 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-2 chr11 72207647 72208249 + 0.30427111960232 NA promoter-TSS (NR_155066) promoter-TSS (NR_155066) 394 NM_026559 52700 Mm.27670 NM_026559 ENSMUSG00000020803 Txndc17 4831443O22Rik|D11Ertd672e|TRP14|Txnl5 thioredoxin domain containing 17 protein-coding common_peak1_40_33_-0.00944829407665715_5.08273869421201_0.30427111960232-5 chr2 24451986 24452502 + 0.30427111960232 NA intron (NM_011040, intron 2 of 11) intron (NM_011040, intron 2 of 11) 23355 NM_011040 18510 Mm.2533 NM_011040 ENSMUSG00000026976 Pax8 Pax-8 paired box 8 protein-coding common_peak1_166_134_0.0130567749757136_7.08334398453869_0.304247021246038 chr10 80158091 80159819 + 0.304247021246038 NA TTS (NM_021565) TTS (NM_021565) -8884 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_167_135_0.010961895622553_7.09294378906162_0.304223366218359 chr3 146812269 146813591 + 0.304223366218359 NA promoter-TSS (NM_011100) promoter-TSS (NM_011100) 16 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-5 chr8 18846273 18846941 + 0.304177167304369 NA exon (NM_026792, exon 1 of 8) exon (NM_026792, exon 1 of 8) 328 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak2_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369 chr11 16805806 16806372 + 0.304177167304369 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 53886 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-4 chr15 82127977 82128391 + 0.304177167304369 NA intron (NR_137170, intron 1 of 5) CpG 209 NR_137170 76457 Mm.440373 NM_172428 ENSMUSG00000068114 Ccdc134 2310042L06Rik|AW208859 coiled-coil domain containing 134 protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-5 chr16 93006548 93007188 + 0.304177167304369 NA Intergenic Intergenic -180794 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-7 chr2 145321745 145322355 + 0.304177167304369 NA intron (NM_053195, intron 2 of 16) intron (NM_053195, intron 2 of 16) 79439 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-10 chr5 109558714 109559066 + 0.304177167304369 NA 5' UTR (NM_016715, exon 1 of 8) 5' UTR (NM_016715, exon 1 of 8) 103 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak2_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-2 chr17 88543528 88543983 + 0.304177167304369 NA intron (NM_028658, intron 2 of 21) intron (NM_028658, intron 2 of 21) 13631 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-8 chr4 83306364 83307117 + 0.304177167304369 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 17449 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-4 chr2 137662762 137663326 + 0.304177167304369 NA Intergenic Intergenic -546524 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-6 chr19 8983213 8983516 + 0.304177167304369 NA Intergenic Intergenic -5920 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-6 chr7 116092753 116093112 + 0.304177167304369 NA promoter-TSS (NM_019772) promoter-TSS (NM_019772) 217 NR_029433 69350 Mm.440425 NR_029433 ENSMUSG00000087621 1700003G18Rik 2610312K03Rik RIKEN cDNA 1700003G18 gene ncRNA common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369 chr1 118388324 118388730 + 0.304177167304369 NA promoter-TSS (NM_001359346) promoter-TSS (NM_001359346) -531 NM_001359329 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-2 chr2 152331807 152332211 + 0.304177167304369 NA intron (NM_001355282, intron 1 of 12) intron (NM_001355282, intron 1 of 12) 416 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-3 chr15 56721803 56722220 + 0.304177167304369 NA Intergenic Intergenic -27465 NM_008216 15117 Mm.5148 NM_008216 ENSMUSG00000022367 Has2 - hyaluronan synthase 2 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-7 chr4 43728020 43728413 + 0.304177167304369 NA TTS (NM_027511) TTS (NM_027511) 1018 NM_027511 100039781 Mm.18796 NM_027511 ENSMUSG00000071001 Hrct1 3830408D24Rik histidine rich carboxyl terminus 1 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-2 chr12 28751892 28752261 + 0.304177167304369 NA intron (NM_201357, intron 1 of 8) intron (NM_201357, intron 1 of 8) 248 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Eipr1 D12Ertd604e|Tssc1 EARP complex and GARP complex interacting protein 1 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-5 chr3 60504217 60505026 + 0.304177167304369 NA intron (NM_001253711, intron 1 of 7) intron (NM_001253711, intron 1 of 7) 3442 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind like splicing factor 1 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369 chr11 16807444 16808027 + 0.304177167304369 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 55532 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-6 chr3 152714148 152714553 + 0.304177167304369 NA intron (NM_025662, intron 1 of 10) CpG 250 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik|Gm38470|PIG-K phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-9 chr4 129262975 129263330 + 0.304177167304369 NA Intergenic Intergenic -1748 NM_001285867 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak2_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-3 chr2 32693671 32694152 + 0.304177167304369 NA intron (NM_010236, intron 1 of 14) CpG 264 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-4 chr5 124328199 124328906 + 0.304177167304369 NA promoter-TSS (NM_001277867) promoter-TSS (NM_001277867) 463 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369 chr11 98962813 98963179 + 0.304177167304369 NA intron (NM_001176528, intron 1 of 7) intron (NM_001176528, intron 1 of 7) -1876 NM_001361954 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-3 chr4 83306527 83307271 + 0.304177167304369 NA intron (NM_027238, intron 1 of 19) RSINE1|SINE|B4 17290 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369 chr8 72491952 72492457 + 0.304177167304369 NA exon (NM_177766, exon 1 of 6) exon (NM_177766, exon 1 of 6) 410 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-4 chr16 32419856 32420388 + 0.304177167304369 NA intron (NR_154990, intron 1 of 3) intron (NR_154990, intron 1 of 3) 420 NM_001347183 66061 Mm.302693 NM_025329 ENSMUSG00000014075 Tctex1d2 0610012D17Rik|2410011K15Rik Tctex1 domain containing 2 protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-2 chr11 32398719 32399342 + 0.304177167304369 NA intron (NM_177364, intron 6 of 12) intron (NM_177364, intron 6 of 12) 51219 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding common_peak2_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-5 chr4 130001071 130001591 + 0.304177167304369 NA intron (NM_001199696, intron 2 of 28) intron (NM_001199696, intron 2 of 28) 9277 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak2_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-3 chr12 111442736 111443556 + 0.304177167304369 NA intron (NM_009396, intron 1 of 11) intron (NM_009396, intron 1 of 11) 485 NM_009396 21928 Mm.255332 NM_009396 ENSMUSG00000021281 Tnfaip2 B94|Exoc3l3|M-sec|Tnfip2|tnfb94 tumor necrosis factor, alpha-induced protein 2 protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-7 chr9 122117304 122117798 + 0.304177167304369 NA promoter-TSS (NM_001357776) promoter-TSS (NM_001357776) 92 NM_001357776 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak1_41_34_-0.0167483209255863_5.12090885648217_0.304177167304369-8 chr8 3620444 3621071 + 0.304177167304369 NA promoter-TSS (NM_001195244) promoter-TSS (NM_001195244) 539 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak1_42_34_0.0169595132644655_5.1377627735772_0.304177167304369-6 chr9 92273900 92274396 + 0.304177167304369 NA Intergenic Intergenic -1454 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding unique_peak2_40_35_-0.0919104542686302_5.123969774308_0.304177167304356 chr5 146675593 146676470 + 0.304177167304356 NA Intergenic Tigger7|DNA|TcMar-Tigger -90792 NM_001359057 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding common_peak2_40_35_-0.0919104542686302_5.123969774308_0.304177167304356-4 chr7 5061755 5062045 + 0.304177167304356 NA promoter-TSS (NM_133671) promoter-TSS (NM_133671) -243 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_40_35_-0.0919104542686302_5.123969774308_0.304177167304356-3 chr6 47758327 47758647 + 0.304177167304356 NA Intergenic CpG -5562 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_40_35_-0.0919104542686302_5.123969774308_0.304177167304356 chr1 93803984 93804295 + 0.304177167304356 NA intron (NM_025454, intron 1 of 7) CpG 174 NM_025454 66262 Mm.64065 NM_025454 ENSMUSG00000026283 Ing5 1700001C14Rik|1700027H23Rik|1810018M11Rik|AI225768 inhibitor of growth family, member 5 protein-coding common_peak1_40_35_-0.0919104542686302_5.123969774308_0.304177167304356-3 chr3 81377819 81378419 + 0.304177167304356 NA Intergenic Intergenic 341703 NM_001357746 54635 Mm.331089 NM_019971 ENSMUSG00000028019 Pdgfc 1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E platelet-derived growth factor, C polypeptide protein-coding common_peak1_40_35_-0.0919104542686302_5.123969774308_0.304177167304356 chr12 113014666 113015227 + 0.304177167304356 NA intron (NM_001081170, intron 1 of 23) CpG 438 NM_001291444 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak2_40_35_-0.0919104542686302_5.123969774308_0.304177167304356-2 chr17 73574862 73575728 + 0.304177167304356 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 135156 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_40_35_-0.0919104542686302_5.123969774308_0.304177167304356-2 chr2 83675677 83676250 + 0.304177167304356 NA Intergenic Intergenic 31385 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak2_383_314_-0.0165522902350048_8.29093187326978_0.304156927941046 chr12 80257287 80260173 + 0.304156927941046 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 1641 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak1_171_138_0.0131914983394363_7.12553682189323_0.304154443349495 chr17 35821773 35823093 + 0.304154443349495 NA promoter-TSS (NM_008027) promoter-TSS (NM_008027) 720 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding common_peak1_168_140_-0.0326250068528511_7.12323884897237_0.304154443349495 chr19 47090047 47091407 + 0.304154443349495 NA promoter-TSS (NM_011053) promoter-TSS (NM_011053) -39 NM_011053 18572 Mm.41166 NM_011053 ENSMUSG00000025047 Pdcd11 1110021I22Rik|ALG-4|Pdcd7|mKIAA0185 programmed cell death 11 protein-coding common_peak1_169_141_-0.0343693225608401_7.13256245822426_0.304132125485128 chr10 62448902 62450461 + 0.304132125485128 NA promoter-TSS (NM_181423) promoter-TSS (NM_181423) 57 NM_001359806 338359 Mm.235898 NM_181423 ENSMUSG00000020079 Supv3l1 6330443E10Rik suppressor of var1, 3-like 1 (S. cerevisiae) protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-4 chr15 63722594 63723033 + 0.304088508634286 NA Intergenic AT_rich|Low_complexity|Low_complexity 85926 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-6 chr7 28952774 28953360 + 0.304088508634286 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 9265 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-5 chr7 13036303 13036899 + 0.304088508634286 NA exon (NM_001243968, exon 2 of 6) exon (NM_001243968, exon 2 of 6) 1026 NM_001243968 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-5 chr4 43030793 43031296 + 0.304088508634286 NA exon (NM_023231, exon 2 of 10) exon (NM_023231, exon 2 of 10) 340 NM_023231 66592 Mm.331565 NM_023231 ENSMUSG00000028455 Stoml2 0610038F01Rik|MSLP2|SLP-2 stomatin (Epb7.2)-like 2 protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-4 chr4 141303472 141303916 + 0.304088508634286 NA intron (NM_010139, intron 1 of 16) intron (NM_010139, intron 1 of 16) 2473 NM_010139 13836 Mm.2581 NM_010139 ENSMUSG00000006445 Epha2 AW545284|Eck|Myk2|Sek-2|Sek2 Eph receptor A2 protein-coding common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-2 chr10 14544842 14545713 + 0.304088508634286 NA promoter-TSS (NM_001002268) promoter-TSS (NM_001002268) -241 NM_001002268 215798 Mm.440142 NM_001002268 ENSMUSG00000039116 Adgrg6 1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126 adhesion G protein-coupled receptor G6 protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-7 chr8 94097832 94098356 + 0.304088508634286 NA intron (NM_026116, intron 1 of 16) intron (NM_026116, intron 1 of 16) 717 NM_026116 67378 Mm.292107 NM_026116 ENSMUSG00000031755 Bbs2 2410125H22Rik|AI447581 Bardet-Biedl syndrome 2 (human) protein-coding common_peak1_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286 chr8 126686049 126686544 + 0.304088508634286 NA Intergenic Intergenic -92860 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-6 chr4 139227011 139227565 + 0.304088508634286 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 33177 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-3 chr14 46966764 46967235 + 0.304088508634286 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -12071 NR_105813 102465206 NR_105813 ENSMUSG00000099036 Mir378c Gm27930|mmu-mir-378c microRNA 378c ncRNA common_peak1_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-2 chr9 53537306 53537703 + 0.304088508634286 NA promoter-TSS (NM_007499) promoter-TSS (NM_007499) 457 NM_001081152 244879 Mm.116713 NM_001081152 ENSMUSG00000033054 Npat 6820401K01|AI427561|BB112559 nuclear protein in the AT region protein-coding common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286 chr1 151755466 151755967 + 0.304088508634286 NA promoter-TSS (NR_151473) promoter-TSS (NR_151473) 342 NM_001311166 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-2 chr12 80375067 80375645 + 0.304088508634286 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 16321 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA unique_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286 chr6 131339234 131339789 + 0.304088508634286 NA Intergenic Intergenic -25684 NM_172891 243659 Mm.20114 NM_172891 ENSMUSG00000032899 Styk1 9130025L13|AI326477|Nok serine/threonine/tyrosine kinase 1 protein-coding common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-4 chr16 55541016 55541504 + 0.304088508634286 NA Intergenic Intergenic 46529 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-6 chr5 136051980 136052267 + 0.304088508634286 NA Intergenic Intergenic -5144 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-8 chr8 111258382 111258719 + 0.304088508634286 NA intron (NM_009149, intron 1 of 25) CpG 652 NM_009149 20340 Mm.276271 NM_009149 ENSMUSG00000003316 Glg1 AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel golgi apparatus protein 1 protein-coding common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-3 chr15 76538285 76538731 + 0.304088508634286 NA promoter-TSS (NM_029643) promoter-TSS (NM_029643) 238 NM_013909 30840 Mm.275279 NM_013909 ENSMUSG00000022559 Fbxl6 AU021795|Fbl6 F-box and leucine-rich repeat protein 6 protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-5 chr18 75005913 75006395 + 0.304088508634286 NA 5' UTR (NM_001358306, exon 1 of 3) 5' UTR (NM_001358306, exon 1 of 3) 315 NM_001001181 407819 Mm.29866 NM_001001181 ENSMUSG00000036299 BC031181 - cDNA sequence BC031181 protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286 chr11 74637952 74638582 + 0.304088508634286 NA exon (NM_001013784, exon 4 of 4) exon (NM_001013784, exon 4 of 4) -11228 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-2 chr14 32202014 32202429 + 0.304088508634286 NA promoter-TSS (NM_016897) promoter-TSS (NM_016897) 250 NM_011960 26430 Mm.15962 NM_011960 ENSMUSG00000021911 Parg AI413217 poly (ADP-ribose) glycohydrolase protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-8 chrX 109142567 109143067 + 0.304088508634286 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 47410 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-3 chr14 56810987 56811615 + 0.304088508634286 NA promoter-TSS (NR_152252) promoter-TSS (NR_152252) 163 NM_001253753 219105 Mm.473172 NM_144842 ENSMUSG00000040123 Zmym5 9830124H08Rik zinc finger, MYM-type 5 protein-coding common_peak1_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286-3 chrX 151521194 151521674 + 0.304088508634286 NA 5' UTR (NM_177201, exon 1 of 19) 5' UTR (NM_177201, exon 1 of 19) 762 NM_001113354 320595 Mm.17156 NM_177201 ENSMUSG00000041229 Phf8 9830141C09Rik|mKIAA1111 PHD finger protein 8 protein-coding common_peak2_41_36_-0.0969186696095701_5.16099403082417_0.304088508634286 chr11 93956025 93956453 + 0.304088508634286 NA promoter-TSS (NM_008705) promoter-TSS (NM_008705) 17 NM_008705 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding common_peak1_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-7 chr9 58307983 58308460 + 0.304088508634286 NA intron (NM_010729, intron 1 of 6) intron (NM_010729, intron 1 of 6) 4991 NM_010729 16949 Mm.250492 NM_010729 ENSMUSG00000032334 Loxl1 Loxl lysyl oxidase-like 1 protein-coding common_peak2_42_36_-0.0632108354195182_5.17784794791919_0.304088508634286-7 chr4 145781504 145781909 + 0.304088508634286 NA intron (NM_001083918, intron 1 of 6) intron (NM_001083918, intron 1 of 6) 163 NM_001083918 666532 Mm.392861 NM_001083918 ENSMUSG00000067916 Zfp991 Gm13139 zinc finger protein 991 protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-6 chr19 44247721 44248164 + 0.304088508634279 NA Intergenic Intergenic 44654 NM_024450 30049 Mm.480594 NM_024450 ENSMUSG00000025202 Scd3 4930513N16Rik stearoyl-coenzyme A desaturase 3 protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-2 chr13 91360057 91360550 + 0.304088508634279 NA Intergenic Intergenic 27782 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-7 chr2 116980701 116981198 + 0.304088508634279 NA Intergenic Intergenic 80797 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-10 chr8 77490166 77490737 + 0.304088508634279 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -26605 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-7 chr2 129263442 129264135 + 0.304088508634279 NA Intergenic Intergenic 33424 NM_181589 70466 Mm.45785 NM_181589 ENSMUSG00000048327 Ckap2l 2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm cytoskeleton associated protein 2-like protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-9 chr8 11371661 11372086 + 0.304088508634279 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -59047 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-4 chr15 83121666 83122040 + 0.304088508634279 NA exon (NM_029101, exon 2 of 7) exon (NM_029101, exon 2 of 7) 948 NM_001358061 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-5 chr19 32188600 32189079 + 0.304088508634279 NA intron (NM_144792, intron 5 of 9) ORR1G|LTR|ERVL-MaLR 22174 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-3 chr15 64059828 64060461 + 0.304088508634279 NA promoter-TSS (NM_001360038) promoter-TSS (NM_001360038) 304 NM_001360036 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-8 chr8 126797949 126798418 + 0.304088508634279 NA Intergenic Intergenic -50837 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-2 chr14 20891467 20891983 + 0.304088508634279 NA Intergenic Intergenic -37673 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-5 chr19 44247706 44248180 + 0.304088508634279 NA Intergenic Intergenic 44655 NM_024450 30049 Mm.480594 NM_024450 ENSMUSG00000025202 Scd3 4930513N16Rik stearoyl-coenzyme A desaturase 3 protein-coding common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-3 chr15 31186543 31187301 + 0.304088508634279 NA Intergenic Intergenic -37463 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-4 chr15 67039276 67039763 + 0.304088508634279 NA Intergenic Intergenic -69878 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-6 chr19 53403494 53404039 + 0.304088508634279 NA Intergenic Intergenic -13132 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279 chr1 34108877 34109508 + 0.304088508634279 NA intron (NM_001276764, intron 5 of 102) intron (NM_001276764, intron 5 of 102) -8167 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak2_43_35_0.00925040115474829_5.17455020201969_0.304088508634279 chr10 82813378 82814040 + 0.304088508634279 NA intron (NR_038042, intron 1 of 2) B3|SINE|B2 1586 NR_038042 70003 Mm.48789 NR_038042 ENSMUSG00000056821 1700028I16Rik - RIKEN cDNA 1700028I16 gene ncRNA common_peak1_43_35_0.00925040115474829_5.17455020201969_0.304088508634279-8 chr4 108619259 108619778 + 0.304088508634279 NA promoter-TSS (NM_177045) promoter-TSS (NM_177045) -438 NM_177045 319965 Mm.151129 NM_177045 ENSMUSG00000028582 Cc2d1b A830039B04Rik|Freud2 coiled-coil and C2 domain containing 1B protein-coding common_peak1_392_322_-0.0195474235973236_8.32561664289526_0.304078876012507 chr8 122523527 122527151 + 0.304078876012507 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 25990 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_176_142_0.0133103711985001_7.16652652237764_0.304067044766384 chr8 126807732 126809373 + 0.304067044766384 NA Intergenic Intergenic -40468 NR_151740 414091 Mm.240068 NM_001033546 A630001O12Rik Gm45803 RIKEN cDNA A630001O12 gene ncRNA common_peak2_177_143_0.0113272453843711_7.1755886241345_0.304045953807243 chr3 87909408 87911100 + 0.304045953807243 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 3404 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_176_146_-0.0264906368594753_7.18642702640663_0.304025153765104 chr15 6386789 6388696 + 0.304025153765104 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 994 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-2 chr13 90797570 90798135 + 0.304004708442489 NA Intergenic Intergenic 107503 NM_001145879 435376 Mm.292579 NM_001145879 ENSMUSG00000078958 Atp6ap1l EG435376 ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-6 chr6 58640301 58641100 + 0.304004708442489 NA intron (NM_011920, intron 1 of 15) CpG 44028 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-6 chr14 31660087 31660736 + 0.304004708442489 NA intron (NM_025295, intron 1 of 3) intron (NM_025295, intron 1 of 3) 19354 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-2 chr1 128103317 128103862 + 0.304004708442489 NA promoter-TSS (NM_001357573) promoter-TSS (NM_001357573) 283 NM_181750 226412 Mm.221041 NM_181750 ENSMUSG00000056211 R3hdm1 R3hdm R3H domain containing 1 protein-coding common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489 chr14 46966726 46967221 + 0.304004708442489 NA intron (NM_001037221, intron 2 of 12) intron (NM_001037221, intron 2 of 12) -12045 NR_105813 102465206 NR_105813 ENSMUSG00000099036 Mir378c Gm27930|mmu-mir-378c microRNA 378c ncRNA common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-2 chr15 25365353 25365828 + 0.304004708442489 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 48174 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-7 chr7 127614692 127615129 + 0.304004708442489 NA promoter-TSS (NM_177226) promoter-TSS (NM_177226) -43 NR_155452 320683 Mm.156718 NM_177226 ENSMUSG00000045639 Zfp629 9330199A09Rik|Znf629 zinc finger protein 629 protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-3 chr10 88146957 88147437 + 0.304004708442489 NA promoter-TSS (NM_029249) promoter-TSS (NM_029249) 126 NM_028334 69736 Mm.222184 NM_027191 ENSMUSG00000035351 Nup37 2410003L22Rik|2810039M17Rik nucleoporin 37 protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-5 chr3 61366148 61366826 + 0.304004708442489 NA 3' UTR (NM_028712, exon 1 of 1) 3' UTR (NM_028712, exon 1 of 1) 1980 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-6 chr2 132211880 132212481 + 0.304004708442489 NA Intergenic Intergenic 35608 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-8 chr8 36028365 36029031 + 0.304004708442489 NA Intergenic Intergenic -66130 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489 chr1 89107742 89108403 + 0.304004708442489 NA intron (NM_133816, intron 2 of 5) intron (NM_133816, intron 2 of 5) 37657 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-4 chr18 75005968 75006447 + 0.304004708442489 NA exon (NM_001358306, exon 1 of 3) exon (NM_001358306, exon 1 of 3) 368 NM_001001181 407819 Mm.29866 NM_001001181 ENSMUSG00000036299 BC031181 - cDNA sequence BC031181 protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-3 chr15 81086582 81087052 + 0.304004708442489 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 18230 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-6 chr7 43787355 43788033 + 0.304004708442489 NA Intergenic Intergenic -4197 NM_028660 101533 Mm.19942 NM_028660 ENSMUSG00000047884 Klk9 1200016C12Rik|AI324041 kallikrein related-peptidase 9 protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-4 chr13 94284860 94285327 + 0.304004708442489 NA intron (NM_001346609, intron 1 of 8) CpG 188 NM_029153 107767 Mm.201455 NM_029153 ENSMUSG00000021687 Scamp1 4930505M11Rik|AI415563|AW122395 secretory carrier membrane protein 1 protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-4 chr18 67205529 67205984 + 0.304004708442489 NA exon (NM_024190, exon 1 of 1) exon (NM_024190, exon 1 of 1) 397 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-9 chr3 83055651 83056007 + 0.304004708442489 NA intron (NM_016784, intron 1 of 14) intron (NM_016784, intron 1 of 14) 291 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-3 chr18 46675535 46676370 + 0.304004708442489 NA Intergenic Intergenic 52550 NM_033037 12583 Mm.241056 NM_033037 ENSMUSG00000033022 Cdo1 1300002L19Rik|Cdo|D18Ucla3 cysteine dioxygenase 1, cytosolic protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489 chr1 127204762 127205468 + 0.304004708442489 NA 5' UTR (NM_145128, exon 1 of 18) 5' UTR (NM_145128, exon 1 of 18) 129 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-7 chr8 54547369 54548192 + 0.304004708442489 NA Intergenic Intergenic -2551 NM_029569 76294 Mm.33171 NM_029569 ENSMUSG00000031519 Asb5 1110018D09Rik ankyrin repeat and SOCs box-containing 5 protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-5 chr4 88796797 88797090 + 0.304004708442489 NA promoter-TSS (NM_001243166).2 promoter-TSS (NM_001243166).2 201 NM_001098841 545651 Mm.149203 NM_001098841 ENSMUSG00000101163 Gm13278 - predicted gene 13278 protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-4 chr2 32606984 32607550 + 0.304004708442489 NA intron (NM_001025310, intron 1 of 5) CpG 282 NR_110347 50935 Mm.88831 NM_016973 ENSMUSG00000026811 St6galnac6 ST6GalNAcVI|Siat7f ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-7 chr17 65940081 65940625 + 0.304004708442489 NA intron (NM_023053, intron 2 of 4) intron (NM_023053, intron 2 of 4) 10834 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak2_44_36_0.00191478179763394_5.21041075652777_0.304004708442489 chr10 85957285 85957690 + 0.304004708442489 NA intron (NM_145422, intron 1 of 11) CpG 306 NM_145422 28088 Mm.9257 NM_145422 ENSMUSG00000001783 Rtcb AI255213|AI463255|D10Wsu52e|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-10 chr6 134999434 135000243 + 0.304004708442489 NA Intergenic MTE2b|LTR|ERVL-MaLR -11774 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak2_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-2 chr13 44730773 44731406 + 0.304004708442489 NA promoter-TSS (NM_001360281) promoter-TSS (NM_001360281) -182 NM_001360281 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-3 chr16 11175933 11176247 + 0.304004708442489 NA intron (NR_027502, intron 1 of 22) CpG 303 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-8 chr2 158168297 158168664 + 0.304004708442489 NA Intergenic MER20B|DNA|hAT-Charlie -22088 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-7 chr9 59617317 59617928 + 0.304004708442489 NA intron (NM_001205239, intron 1 of 23) CpG 338 NR_038074 67287 Mm.439943 NM_029922 ENSMUSG00000025237 Parp6 1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6 poly (ADP-ribose) polymerase family, member 6 protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-11 chr8 86862193 86862714 + 0.304004708442489 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 22805 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_44_36_0.00191478179763394_5.21041075652777_0.304004708442489-5 chr2 60800354 60801009 + 0.304004708442489 NA intron (NM_001141932, intron 2 of 14) intron (NM_001141932, intron 2 of 14) -78078 NM_001159564 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-12 chr9 107699020 107699417 + 0.304004708442489 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 6373 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_43_37_-0.0687521108465248_5.21355145802032_0.304004708442489-5 chr14 7874637 7875273 + 0.304004708442489 NA intron (NM_001081427, intron 4 of 45) intron (NM_001081427, intron 4 of 45) 56998 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_177_147_-0.0282011188022668_7.19535280622782_0.304004638661519 chr10 128410533 128412631 + 0.304004638661519 NA promoter-TSS (NR_104288) promoter-TSS (NR_104288) -34 NR_104288 67588 Mm.294120 NM_026259 ENSMUSG00000025373 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1 ring finger protein 41 protein-coding common_peak1_180_146_0.00552224522176203_7.20243346744725_0.303984402681652 chr15 36607451 36608835 + 0.303984402681652 NA intron (NM_008774, intron 1 of 14) CpG 830 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_181_146_0.0134149200463902_7.20637980485956_0.303984402681652 chr15 53689592 53690628 + 0.303984402681652 NA intron (NM_177225, intron 3 of 4) intron (NM_177225, intron 3 of 4) -75831 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_181_146_0.0134149200463902_7.20637980485956_0.303984402681652 chr19 40241036 40242317 + 0.303984402681652 NA intron (NM_016861, intron 4 of 6) intron (NM_016861, intron 4 of 6) 29940 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_180_146_0.00552224522176203_7.20243346744725_0.303984402681652 chr18 35562161 35563638 + 0.303984402681652 NA intron (NM_010771, intron 1 of 14) CpG 741 NM_010771 17184 Mm.215034 NM_010771 ENSMUSG00000037236 Matr3 1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723 matrin 3 protein-coding common_peak2_180_146_0.00552224522176203_7.20243346744725_0.303984402681652-2 chr18 67984859 67986437 + 0.303984402681652 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 52475 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_181_150_-0.0253174744423239_7.22574600210392_0.303944745612066 chr19 47089726 47091556 + 0.303944745612066 NA promoter-TSS (NM_011053) promoter-TSS (NM_011053) -16 NM_023211 66477 Mm.29722 NM_023211 ENSMUSG00000071528 Usmg5 2010301L15Rik upregulated during skeletal muscle growth 5 protein-coding common_peak1_181_150_-0.0253174744423239_7.22574600210392_0.303944745612066 chr3 88685799 88687177 + 0.303944745612066 NA exon (NM_028814, exon 2 of 14) exon (NM_028814, exon 2 of 14) 701 NR_151827 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Khdc4|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak2_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267 chr12 52635365 52636125 + 0.30392537800267 NA Intergenic Intergenic -33423 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-7 chr8 69808737 69809222 + 0.30392537800267 NA intron (NM_198101, intron 1 of 20) intron (NM_198101, intron 1 of 20) 292 NM_198101 78816 Mm.324305 NM_198101 ENSMUSG00000036246 Gmip 5031419I10Rik Gem-interacting protein protein-coding common_peak2_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-2 chr19 16273315 16273810 + 0.30392537800267 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 41442 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-4 chr17 35770993 35771573 + 0.30392537800267 NA Intergenic B4A|SINE|B4 -1167 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-2 chr11 8587391 8587968 + 0.30392537800267 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 76856 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-3 chr15 88863991 88864729 + 0.30392537800267 NA exon (NM_145478, exon 5 of 6) exon (NM_145478, exon 5 of 6) 2166 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding unique_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267 chr12 86867329 86868254 + 0.30392537800267 NA Intergenic B1_Mus2|SINE|Alu 17023 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-5 chr2 15055307 15055758 + 0.30392537800267 NA promoter-TSS (NM_001165943) promoter-TSS (NM_001165943) 170 NM_029466 75869 Mm.174068 NM_029466 ENSMUSG00000017418 Arl5b 4930587A11Rik|AW146430|Arl8 ADP-ribosylation factor-like 5B protein-coding common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-6 chr8 33653062 33653407 + 0.30392537800267 NA promoter-TSS (NM_010344) promoter-TSS (NM_010344) -4 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267 chr1 134494742 134495394 + 0.30392537800267 NA intron (NM_145510, intron 1 of 1) intron (NM_145510, intron 1 of 1) 408 NM_145510 98710 Mm.198119 NM_145510 ENSMUSG00000042229 Rabif AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3 RAB interacting factor protein-coding common_peak1_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-2 chr13 32519263 32519867 + 0.30392537800267 NA Intergenic Intergenic -181021 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267 chr1 136694772 136695281 + 0.30392537800267 NA Intergenic Intergenic -1185 NR_037986 100503474 Mm.428276 NR_037986 Platr22 Gm16880 pluripotency associated transcript 22 ncRNA common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-2 chr10 81378024 81378424 + 0.30392537800267 NA intron (NM_019757, intron 1 of 13) CpG 146 NM_019757 56371 Mm.24202 NM_019757 ENSMUSG00000020235 Fzr1 AW108046|Cdh1|FZR|FZR2|Fyr|HCDH|HCDH1 fizzy and cell division cycle 20 related 1 protein-coding unique_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-2 chr8 83331970 83332422 + 0.30392537800267 NA intron (NM_001170691, intron 1 of 8) CpG 290 NM_001170691 244548 Mm.38762 NM_178736 ENSMUSG00000035151 Elmod2 9830169G11Rik ELMO/CED-12 domain containing 2 protein-coding common_peak1_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267 chr13 23531002 23531806 + 0.30392537800267 NA TTS (NM_153173) TTS (NM_153173) 360 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-3 chr15 5219733 5220407 + 0.30392537800267 NA Intergenic Intergenic 24117 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-6 chr6 118454824 118455532 + 0.30392537800267 NA intron (NM_001361901, intron 1 of 5) CpG 328 NM_028335 72720 Mm.212572 NM_028335 ENSMUSG00000030145 Zfp248 2810037F07Rik|E130106N01Rik zinc finger protein 248 protein-coding common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-4 chr17 34837104 34837715 + 0.30392537800267 NA promoter-TSS (NM_019442) promoter-TSS (NM_019442) 390 NM_001163770 112403 Mm.275309 NM_033613 ENSMUSG00000040482 Dxo Dom3z|NG6 decapping exoribonuclease protein-coding common_peak2_44_38_-0.0740340714356647_5.24838518314442_0.30392537800267-3 chr16 32277508 32277889 + 0.30392537800267 NA 5' UTR (NM_027355, exon 1 of 6) 5' UTR (NM_027355, exon 1 of 6) 237 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-7 chr8 70001088 70001773 + 0.30392537800267 NA Intergenic Intergenic -5046 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-5 chr3 84319047 84319554 + 0.30392537800267 NA Intergenic Intergenic -14525 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak2_45_37_-0.00507421164733035_5.24539040761992_0.30392537800267-3 chr4 141245086 141245468 + 0.30392537800267 NA intron (NM_172520, intron 2 of 16) intron (NM_172520, intron 2 of 16) 2393 NM_172520 213649 Mm.134460 NM_172520 ENSMUSG00000028919 Arhgef19 6030432F23|6430573B13Rik|WGEF Rho guanine nucleotide exchange factor (GEF) 19 protein-coding common_peak1_188_152_0.00976307820839306_7.26226938179685_0.30386854189954 chr19 36118570 36119895 + 0.30386854189954 NA exon (NM_013468, exon 2 of 9) exon (NM_013468, exon 2 of 9) 612 NM_013468 107765 Mm.10279 NM_013468 ENSMUSG00000024803 Ankrd1 Alrp|CARP|Crap|MARP1 ankyrin repeat domain 1 (cardiac muscle) protein-coding common_peak1_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-5 chr6 17546382 17547097 + 0.303850168981672 NA intron (NM_008591, intron 12 of 21) intron (NM_008591, intron 12 of 21) 82782 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-2 chr17 73708896 73709607 + 0.303850168981672 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 1200 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak2_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-2 chr13 54590320 54590897 + 0.303850168981672 NA promoter-TSS (NM_178605) promoter-TSS (NM_178605) 377 NM_025933 67044 Mm.29353 NM_025933 ENSMUSG00000025868 Higd2a 2010110M21Rik|AA690237 HIG1 domain family, member 2A protein-coding common_peak1_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-6 chr8 84689436 84689865 + 0.303850168981672 NA 5' UTR (NM_001164559, exon 2 of 17) 5' UTR (NM_001164559, exon 2 of 17) 403 NM_198020 212528 Mm.275720 NM_198020 ENSMUSG00000001909 Trmt1 6720406L13Rik|6720477L24|D8Ertd812e tRNA methyltransferase 1 protein-coding common_peak2_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-3 chr4 82265671 82266447 + 0.303850168981672 NA Intergenic Intergenic -200169 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA common_peak1_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-4 chr5 124900560 124901093 + 0.303850168981672 NA Intergenic Intergenic 38121 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-3 chr3 116507534 116508117 + 0.303850168981672 NA exon (NM_025517, exon 2 of 11) exon (NM_025517, exon 2 of 11) 350 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak2_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-4 chr5 100566604 100567188 + 0.303850168981672 NA intron (NM_139198, intron 1 of 4) intron (NM_139198, intron 1 of 4) 5309 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-5 chr6 126939676 126940188 + 0.303850168981672 NA promoter-TSS (NM_138594) promoter-TSS (NM_138594) -34 NM_138594 28040 Mm.44228 NM_138594 ENSMUSG00000030347 D6Wsu163e C12orf4 DNA segment, Chr 6, Wayne State University 163, expressed protein-coding common_peak2_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672 chr10 19152453 19153204 + 0.303850168981672 NA intron (NR_038021, intron 1 of 3) intron (NR_038021, intron 1 of 3) 11079 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-3 chr13 67636996 67637707 + 0.303850168981672 NA intron (NM_183146, intron 1 of 3) intron (NM_183146, intron 1 of 3) 402 NM_183146 212281 Mm.342918 NM_183146 ENSMUSG00000021510 Zfp729a A530054K11Rik|Rslcan3 zinc finger protein 729a protein-coding common_peak2_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-3 chr5 76529355 76529967 + 0.303850168981672 NA intron (NM_001359370, intron 1 of 19) intron (NM_001359370, intron 1 of 19) 303 NM_001359373 69940 Mm.403233 NM_027270 ENSMUSG00000036435 Exoc1 2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p exocyst complex component 1 protein-coding common_peak1_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-4 chr4 88785104 88785420 + 0.303850168981672 NA 5' UTR (NM_001085532, exon 1 of 1) 5' UTR (NM_001085532, exon 1 of 1) 208 NM_001085532 545649 Mm.474424 NM_001085532 ENSMUSG00000099545 Gm13276 - predicted gene 13276 protein-coding common_peak2_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672 chr17 46161175 46161718 + 0.303850168981672 NA promoter-TSS (NM_001357745) promoter-TSS (NM_001357745) 414 NM_001145979 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding common_peak1_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672 chr11 74637877 74638575 + 0.303850168981672 NA exon (NM_001013784, exon 4 of 4) exon (NM_001013784, exon 4 of 4) -11269 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak2_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672-2 chr19 21652075 21652520 + 0.303850168981672 NA intron (NM_025423, intron 1 of 3) intron (NM_025423, intron 1 of 3) 494 NM_025423 66206 Mm.272430 NM_025423 ENSMUSG00000035171 1110059E24Rik - RIKEN cDNA 1110059E24 gene protein-coding common_peak1_46_38_-0.0117409155601944_5.27953176108215_0.303850168981672 chr1 193399040 193399476 + 0.303850168981672 NA Intergenic Intergenic -28976 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak2_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-5 chr7 5014291 5014638 + 0.303850168981672 NA promoter-TSS (NM_011813) promoter-TSS (NM_011813) -211 NM_001360242 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding common_peak1_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-2 chr11 118418641 118418982 + 0.303850168981672 NA intron (NM_029502, intron 1 of 4) CpG 307 NM_001025617 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak1_45_39_-0.0790747930911078_5.28239069834181_0.303850168981672-6 chr8 36660857 36661293 + 0.303850168981672 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -47132 NM_015802 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak2_187_155_-0.0258508747066823_7.27247678150891_0.303850109521237 chr8 111745294 111746562 + 0.303850109521237 NA Intergenic Intergenic -2079 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_189_153_0.00792385345763691_7.27074846742372_0.303850109521237 chr1 55026048 55027373 + 0.303850109521237 NA intron (NM_031179, intron 1 of 24) intron (NM_031179, intron 1 of 24) 768 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding common_peak1_187_155_-0.0258508747066823_7.27247678150891_0.303850109521237 chr8 111745320 111746662 + 0.303850109521237 NA Intergenic Intergenic -2142 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_192_155_0.0117501516079432_7.29127729466622_0.303813953716832 chr17 84081688 84083698 + 0.303813953716832 NA intron (NR_045458, intron 2 of 5) intron (NR_045458, intron 2 of 5) 4033 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_433_355_-0.0177348009859752_8.46686603047341_0.30379425455136 chr17 17825637 17829288 + 0.30379425455136 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -2726 NR_029536 387230 NR_029536 ENSMUSG00000065396 Mir99b Mirn99b|mmu-mir-99b microRNA 99b ncRNA common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-3 chr15 76576445 76576864 + 0.303778768325576 NA intron (NM_172960, intron 1 of 14) intron (NM_172960, intron 1 of 14) 295 NR_073123 268822 Mm.181624 NM_172960 ENSMUSG00000022550 Adck5 A230108P17 aarF domain containing kinase 5 protein-coding common_peak2_48_39_0.011430048478692_5.32764311912671_0.303778768325576-3 chr4 123917495 123918047 + 0.303778768325576 NA intron (NM_017475, intron 1 of 6) CpG 338 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-2 chr11 86591223 86591813 + 0.303778768325576 NA intron (NM_001356531, intron 10 of 11) intron (NM_001356531, intron 10 of 11) -7360 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_48_39_0.011430048478692_5.32764311912671_0.303778768325576 chr1 44551639 44552463 + 0.303778768325576 NA intron (NM_028450, intron 1 of 10) CpG 380 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-7 chr8 105757655 105758461 + 0.303778768325576 NA intron (NM_027469, intron 1 of 2) intron (NM_027469, intron 1 of 2) 549 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding common_peak1_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-4 chr7 84330565 84331062 + 0.303778768325576 NA intron (NM_007488, intron 5 of 18) intron (NM_007488, intron 5 of 18) 79225 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-6 chr4 137706736 137707768 + 0.303778768325576 NA promoter-TSS (NM_001331215) promoter-TSS (NM_001331215) -253 NM_001331215 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576 chr1 82577855 82578577 + 0.303778768325576 NA intron (NM_007735, intron 1 of 47) intron (NM_007735, intron 1 of 47) 8633 NM_007735 12829 Mm.40253 NM_007735 ENSMUSG00000067158 Col4a4 E130010M05Rik|[a]4(IV) collagen, type IV, alpha 4 protein-coding common_peak1_48_39_0.011430048478692_5.32764311912671_0.303778768325576-2 chr17 12328158 12328827 + 0.303778768325576 NA Intergenic Intergenic 9639 NR_045290 224523 Mm.188855 NR_045290 ENSMUSG00000097350 4732491K20Rik - RIKEN cDNA 4732491K20 gene ncRNA common_peak1_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-2 chr10 80075638 80076332 + 0.303778768325576 NA promoter-TSS (NM_001359636) promoter-TSS (NM_001359636) -546 NM_001359636 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch 2 protein-coding common_peak1_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576 chr1 59120153 59120844 + 0.303778768325576 NA promoter-TSS (NM_001361413) promoter-TSS (NM_001361413) -90 NM_001361413 381259 Mm.261275 NM_001033449 ENSMUSG00000038079 Tmem237 AI853305|Als2cr4|Gm972 transmembrane protein 237 protein-coding common_peak1_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-5 chr3 122520557 122521292 + 0.303778768325576 NA intron (NM_013867, intron 8 of 11) intron (NM_013867, intron 8 of 11) 20757 NR_106117 102465764 NR_106117 ENSMUSG00000104773 Mir7657 mmu-mir-7657 microRNA 7657 ncRNA common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576 chr11 97659685 97660330 + 0.303778768325576 NA Intergenic Intergenic -3405 NM_139311 246198 Mm.23685 NM_139311 ENSMUSG00000038437 Mllt6 AI315037|Af17 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 protein-coding common_peak1_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-2 chr13 41386754 41387462 + 0.303778768325576 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -28107 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-8 chr7 127588741 127589133 + 0.303778768325576 NA promoter-TSS (NM_001033040) promoter-TSS (NM_001033040) 12 NM_001360883 233900 Mm.41122 NM_172281 ENSMUSG00000030816 Rnf40 AI848422|BRE1-B|mKIAA0661 ring finger protein 40 protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-6 chr7 66060315 66060854 + 0.303778768325576 NA non-coding (NR_152094, exon 1 of 8) non-coding (NR_152094, exon 1 of 8) 248 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak2_48_39_0.011430048478692_5.32764311912671_0.303778768325576-4 chr8 3413330 3413890 + 0.303778768325576 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 20602 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-3 chr16 15194777 15195193 + 0.303778768325576 NA Intergenic Intergenic 288339 NM_025769 66793 Mm.100270 NM_025769 ENSMUSG00000068617 Efcab1 4930449A16Rik|5430404L10Rik EF-hand calcium binding domain 1 protein-coding common_peak2_48_39_0.011430048478692_5.32764311912671_0.303778768325576 chr1 105356052 105356680 + 0.303778768325576 NA non-coding (NR_151538, exon 1 of 2) non-coding (NR_151538, exon 1 of 2) 344 NM_178779 320311 Mm.389162 NM_178779 ENSMUSG00000047496 Rnf152 A930029B02Rik ring finger protein 152 protein-coding common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-7 chr4 43557920 43558421 + 0.303778768325576 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 4413 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-3 chr14 31336728 31337212 + 0.303778768325576 NA exon (NM_009796, exon 1 of 21) exon (NM_009796, exon 1 of 21) 332 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-6 chr3 116507554 116508151 + 0.303778768325576 NA intron (NM_025517, intron 1 of 10) CpG 323 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak1_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-4 chr2 174463123 174464036 + 0.303778768325576 NA intron (NM_025983, intron 1 of 2) intron (NM_025983, intron 1 of 2) 522 NM_025983 67126 Mm.20841 NM_025983 ENSMUSG00000016252 Atp5e 2410043G19Rik|ATPE|AV000645|Atp5f1e ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-5 chr3 90604628 90605262 + 0.303778768325576 NA intron (NM_011311, intron 1 of 2) intron (NM_011311, intron 1 of 2) 1175 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-2 chr15 10816714 10817366 + 0.303778768325576 NA Intergenic Intergenic -12011 NR_040357 100502601 Mm.399434 NR_040357 Gm19276 - predicted gene, 19276 ncRNA common_peak1_48_39_0.011430048478692_5.32764311912671_0.303778768325576-3 chr5 138619107 138619607 + 0.303778768325576 NA intron (NM_013844, intron 1 of 5) intron (NM_013844, intron 1 of 5) 386 NM_001163797 24135 Mm.27575 NM_013844 ENSMUSG00000058291 Zfp68 KRAB3|KRAZ2|Zfp70|mszf22|mszf49 zinc finger protein 68 protein-coding common_peak2_48_39_0.011430048478692_5.32764311912671_0.303778768325576-2 chr3 142527654 142528400 + 0.303778768325576 NA Intergenic Intergenic -2309 NM_001083312 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-5 chr2 165387739 165388249 + 0.303778768325576 NA 5' UTR (NM_178411, exon 1 of 5) 5' UTR (NM_178411, exon 1 of 5) 265 NM_178411 228876 Mm.26316 NM_178411 ENSMUSG00000017667 Zfp334 D2Ertd535e zinc finger protein 334 protein-coding common_peak2_46_40_-0.0838907013160295_5.31560665396007_0.303778768325576-4 chr2 37430513 37431203 + 0.303778768325576 NA promoter-TSS (NM_146253) promoter-TSS (NM_146253) 61 NM_146253 241322 Mm.330182 NM_146253 ENSMUSG00000066798 Zbtb6 A830092L04Rik|ZID|Zfp482 zinc finger and BTB domain containing 6 protein-coding common_peak1_47_39_-0.018107428015357_5.31287438087968_0.303778768325576 chr10 77165944 77166361 + 0.303778768325576 NA intron (NM_009929, intron 2 of 41) CpG 378 NM_009929 12822 Mm.4352 NM_009929 ENSMUSG00000001435 Col18a1 - collagen, type XVIII, alpha 1 protein-coding common_peak2_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-4 chr2 51290609 51291311 + 0.303778768325576 NA intron (NR_040636, intron 1 of 2) intron (NR_040636, intron 1 of 2) 49129 NR_040636 329404 Mm.417725 NR_040636 ENSMUSG00000086349 Gm13497 A730015I17 predicted gene 13497 ncRNA common_peak1_47_39_-0.018107428015357_5.31287438087968_0.303778768325576-3 chr11 70451864 70452113 + 0.303778768325576 NA promoter-TSS (NM_025397) promoter-TSS (NM_025397) 57 NM_025397 66172 Mm.46424 NM_025397 ENSMUSG00000018923 Med11 1110030J09Rik|AI465144|AW545069 mediator complex subunit 11 protein-coding common_peak1_48_39_0.011430048478692_5.32764311912671_0.303778768325576-4 chr7 80231976 80232584 + 0.303778768325576 NA promoter-TSS (NM_178752) promoter-TSS (NM_178752) 525 NM_001291276 23991 Mm.30217 NM_011870 ENSMUSG00000030538 Cib1 Cibkip|Kip|Prkdcip calcium and integrin binding 1 (calmyrin) protein-coding common_peak1_48_39_0.011430048478692_5.32764311912671_0.303778768325576-5 chr8 105851562 105851989 + 0.303778768325576 NA intron (NM_177150, intron 1 of 12) intron (NM_177150, intron 1 of 12) 233 NM_177150 320394 Mm.334775 NM_177150 ENSMUSG00000036672 Cenpt G630055P03Rik centromere protein T protein-coding common_peak1_192_159_-0.0247757244171707_7.30954023267878_0.303778713267931 chr2 30442059 30443837 + 0.303778713267931 NA intron (NM_138748, intron 8 of 9) intron (NM_138748, intron 8 of 9) 26898 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak2_194_157_0.00813996811285556_7.30785073223353_0.303778713267882 chr19 40241067 40242734 + 0.303778713267882 NA intron (NM_016861, intron 4 of 6) intron (NM_016861, intron 4 of 6) 29716 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_193_160_-0.0263613032767829_7.31773622647623_0.303761425507054 chr8 117333221 117334877 + 0.303761425507054 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -15121 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_194_161_-0.0279292865946656_7.32588535958729_0.303744353847711 chr8 123064762 123066406 + 0.303744353847711 NA promoter-TSS (NM_153176) promoter-TSS (NM_153176) 76 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN SPG7, paraplegin matrix AAA peptidase subunit protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-7 chr5 151113073 151113589 + 0.303710893903464 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 76862 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-2 chr17 29095579 29096133 + 0.303710893903464 NA intron (NM_007669, intron 1 of 2) intron (NM_007669, intron 1 of 2) 2087 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak1_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-5 chr5 52783076 52783764 + 0.303710893903464 NA intron (NM_030185, intron 1 of 11) intron (NM_030185, intron 1 of 11) 365 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding common_peak1_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-4 chr17 36060116 36060694 + 0.303710893903464 NA Intergenic Intergenic -2034 NM_001199967 100529082 Mm.484641 NM_001199967 ENSMUSG00000079492 Gm11127 - predicted gene 11127 protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-6 chr2 167586354 167586874 + 0.303710893903464 NA Intergenic MIR|SINE|MIR 45391 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-3 chr4 14863533 14864061 + 0.303710893903464 NA promoter-TSS (NM_028264) promoter-TSS (NM_028264) -422 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360|Pip4p2 transmembrane protein 55A protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-8 chr7 82867952 82868712 + 0.303710893903464 NA intron (NM_175366, intron 1 of 1) CpG-13318 999 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak1_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464 chr13 29984578 29984961 + 0.303710893903464 NA promoter-TSS (NM_001289920) promoter-TSS (NM_001289920) -378 NM_001359994 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak1_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-5 chr4 47152063 47152426 + 0.303710893903464 NA Intergenic Intergenic -55768 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding common_peak1_49_40_0.00474685753422488_5.3599254333852_0.303710893903464 chr15 10667814 10668588 + 0.303710893903464 NA intron (NM_001356534, intron 2 of 16) intron (NM_001356534, intron 2 of 16) 45339 NM_030690 75646 Mm.212395 NM_030690 ENSMUSG00000022246 Rai14 1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334 retinoic acid induced 14 protein-coding common_peak1_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-2 chr15 63722618 63723102 + 0.303710893903464 NA Intergenic Intergenic 85879 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding common_peak1_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-4 chr2 8734457 8735194 + 0.303710893903464 NA Intergenic Intergenic -454690 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-7 chrX 74424611 74425184 + 0.303710893903464 NA intron (NM_001161421, intron 1 of 10) intron (NM_001161421, intron 1 of 10) 285 NM_001136067 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding common_peak1_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-5 chr5 37823948 37824493 + 0.303710893903464 NA exon (NM_010835, exon 1 of 2) exon (NM_010835, exon 1 of 2) 365 NM_010835 17701 Mm.256509 NM_010835 ENSMUSG00000048450 Msx1 AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh msh homeobox 1 protein-coding common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-4 chr2 5063397 5064088 + 0.303710893903464 NA intron (NM_001356487, intron 1 of 13) intron (NM_001356487, intron 1 of 13) 375 NM_181848 71648 Mm.116942 NM_181848 ENSMUSG00000026672 Optn 4930441O07Rik|FIP2|HYPL|NRP optineurin protein-coding common_peak1_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464 chr10 91170933 91171526 + 0.303710893903464 NA promoter-TSS (NM_001283048) promoter-TSS (NM_001283048) 390 NM_001080132 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464 chr1 151346946 151347452 + 0.303710893903464 NA intron (NM_001039511, intron 1 of 7) intron (NM_001039511, intron 1 of 7) 2701 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-3 chr16 37940427 37940965 + 0.303710893903464 NA intron (NM_153394, intron 1 of 9) intron (NM_153394, intron 1 of 9) 24200 NM_153394 239845 Mm.228018 NM_153394 ENSMUSG00000046961 Gpr156 Gababl G protein-coupled receptor 156 protein-coding common_peak1_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-4 chr4 115737772 115738300 + 0.303710893903464 NA promoter-TSS (NM_172698) promoter-TSS (NM_172698) -37 NM_172698 230648 Mm.283565 NM_172698 ENSMUSG00000034210 Efcab14 4732418C07Rik EF-hand calcium binding domain 14 protein-coding common_peak2_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464 chr10 81863937 81864179 + 0.303710893903464 NA intron (NM_001243067, intron 1 of 3).2 CpG 124 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-2 chr11 117809845 117810346 + 0.303710893903464 NA intron (NM_009304, intron 1 of 3) CpG 428 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak2_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-3 chr6 99026937 99027468 + 0.303710893903464 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) 1096 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-3 chr18 5740921 5741716 + 0.303710893903464 NA intron (NM_001360982, intron 2 of 7) intron (NM_001360982, intron 2 of 7) 148671 NM_001360981 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-3 chr13 91359955 91360632 + 0.303710893903464 NA Intergenic Intergenic 27792 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA common_peak1_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-2 chr17 46161134 46161734 + 0.303710893903464 NA promoter-TSS (NM_001357745) promoter-TSS (NM_001357745) 402 NM_001145979 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding common_peak1_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-3 chr15 83121636 83122115 + 0.303710893903464 NA exon (NM_029101, exon 2 of 7) exon (NM_029101, exon 2 of 7) 926 NM_001358061 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-6 chr4 88802634 88803016 + 0.303710893903464 NA promoter-TSS (NM_001161609).9 promoter-TSS (NM_001161609).9 -429 NM_001161609 545654 Mm.478784 NM_001161609 ENSMUSG00000095101 Gm13285 limitin predicted gene 13285 protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-10 chr7 141193009 141193835 + 0.303710893903464 NA promoter-TSS (NM_001172064) promoter-TSS (NM_001172064) 582 NM_001130444 15461 Mm.334313 NM_008284 ENSMUSG00000025499 Hras H-ras|Ha-ras|Harvey-ras|Hras-1|Hras1|Kras2|c-H-ras|c-Ha-ras|c-rasHa|ras Harvey rat sarcoma virus oncogene protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-4 chr15 67039151 67039737 + 0.303710893903464 NA Intergenic Intergenic -69803 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-2 chr13 45950941 45951614 + 0.303710893903464 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 13714 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464-5 chr2 25145598 25146228 + 0.303710893903464 NA Intergenic Intergenic -34845 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-6 chr7 67969372 67969732 + 0.303710893903464 NA intron (NM_010513, intron 1 of 20) intron (NM_010513, intron 1 of 20) 17295 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak2_48_41_-0.0589592794127061_5.36283778307241_0.303710893903464 chr1 181151017 181151465 + 0.303710893903464 NA intron (NM_030131, intron 1 of 4) CpG 310 NM_030131 98417 Mm.38229 NM_030131 ENSMUSG00000062169 Cnih4 AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding common_peak2_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-2 chr10 111579400 111580101 + 0.303710893903464 NA Intergenic Intergenic 14523 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_47_41_-0.0884967559067551_5.34806904482538_0.303710893903464-6 chr8 103230380 103231000 + 0.303710893903464 NA Intergenic Intergenic 116844 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-9 chr7 113513891 113514392 + 0.303710893903464 NA intron (NM_001360668, intron 1 of 12) L1M4b|LINE|L1 307 NM_001360669 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-11 chr9 59539701 59540355 + 0.303710893903464 NA intron (NM_010421, intron 1 of 13) CpG 488 NM_010421 15211 Mm.2284 NM_010421 ENSMUSG00000025232 Hexa Hex-1 hexosaminidase A protein-coding common_peak2_49_40_0.00474685753422488_5.3599254333852_0.303710893903464-5 chr17 53478379 53478944 + 0.303710893903464 NA promoter-TSS (NM_025887) promoter-TSS (NM_025887) -573 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak2_199_161_0.00833890012119554_7.34401945294522_0.303710842824577 chr11 103696623 103698641 + 0.303710842824577 NA promoter-TSS (NM_019650) promoter-TSS (NM_019650) 78 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-2 chr12 76403436 76404011 + 0.30364629078125 NA promoter-TSS (NM_008301) promoter-TSS (NM_008301) -453 NM_001002012 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-8 chr9 50603993 50604482 + 0.30364629078125 NA promoter-TSS (NM_025848) promoter-TSS (NM_025848) 336 NM_013897 30057 Mm.335149 NM_013897 ENSMUSG00000039016 Timm8b Tim8b translocase of inner mitochondrial membrane 8B protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-7 chr8 128663648 128664098 + 0.30364629078125 NA Intergenic Intergenic -21781 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-2 chr3 88553838 88554250 + 0.30364629078125 NA intron (NM_033526, intron 1 of 10) intron (NM_033526, intron 1 of 10) 328 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125 chr12 65073386 65073971 + 0.30364629078125 NA intron (NM_013902, intron 1 of 6) CpG 260 NM_013902 30795 Mm.28480 NM_013902 ENSMUSG00000020949 Fkbp3 25kDa|FKBP-3|FKBP25 FK506 binding protein 3 protein-coding common_peak2_49_42_-0.0639658925497892_5.3942818084272_0.30364629078125-2 chr11 61929789 61930213 + 0.30364629078125 NA exon (NM_019921, exon 1 of 15) exon (NM_019921, exon 1 of 15) 256 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-4 chr2 151972629 151973407 + 0.30364629078125 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 376 NM_001289151 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125 chr17 31313038 31313516 + 0.30364629078125 NA intron (NM_001242427, intron 3 of 19) intron (NM_001242427, intron 3 of 19) 17053 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-5 chr9 56505130 56505651 + 0.30364629078125 NA Intergenic Intergenic 86771 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-3 chr4 103114377 103114851 + 0.30364629078125 NA promoter-TSS (NM_146254) promoter-TSS (NM_146254) 224 NM_001286222 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-6 chr6 50379675 50380154 + 0.30364629078125 NA intron (NM_001163645, intron 2 of 21) L3|LINE|CR1 2923 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_49_42_-0.0639658925497892_5.3942818084272_0.30364629078125-3 chr7 133099656 133100285 + 0.30364629078125 NA intron (NM_009980, intron 1 of 10) intron (NM_009980, intron 1 of 10) -18110 NM_001347623 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak1_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-4 chr6 145075046 145075762 + 0.30364629078125 NA intron (NM_007532, intron 1 of 10) intron (NM_007532, intron 1 of 10) 753 NM_007532 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding unique_peak1_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125 chr11 98358444 98359236 + 0.30364629078125 NA promoter-TSS (NR_045477) promoter-TSS (NR_045477) 472 NM_021547 59045 Mm.265546 NM_021547 ENSMUSG00000018167 Stard3 Mln64|es64 START domain containing 3 protein-coding common_peak1_49_42_-0.0639658925497892_5.3942818084272_0.30364629078125 chr12 79597927 79598364 + 0.30364629078125 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 300794 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_49_42_-0.0639658925497892_5.3942818084272_0.30364629078125 chr1 6306245 6306641 + 0.30364629078125 NA Intergenic Intergenic -52888 NM_001195732 620393 Mm.388992 NM_001195732 ENSMUSG00000087247 Alkal1 EG620393|Fam150a ALK and LTK ligand 1 protein-coding common_peak1_49_42_-0.0639658925497892_5.3942818084272_0.30364629078125-2 chr6 142277369 142278260 + 0.30364629078125 NA intron (NM_130861, intron 1 of 14) intron (NM_130861, intron 1 of 14) 1060 NM_001267707 108096 Mm.206599 NM_130861 ENSMUSG00000063975 Slco1a5 Oatp-3|Oatp3|Slc21a7 solute carrier organic anion transporter family, member 1a5 protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-3 chr13 69586644 69587505 + 0.30364629078125 NA intron (NM_175283, intron 3 of 4) intron (NM_175283, intron 3 of 4) 24389 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_50_41_-0.00165096321485425_5.39149194117133_0.30364629078125-5 chr4 129012443 129013059 + 0.30364629078125 NA Intergenic Intergenic 19527 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak2_207_167_0.0120558129566204_7.39834532925707_0.303615097131291 chr2 156179071 156180220 + 0.303615097131291 NA promoter-TSS (NM_001291115) promoter-TSS (NM_001291115) -65 NM_001291115 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak2_206_167_0.00515210389915843_7.39489347472834_0.303615097131291 chr12 4916769 4918710 + 0.303615097131291 NA exon (NM_001099628, exon 1 of 31) exon (NM_001099628, exon 1 of 31) 386 NM_001362349 320817 Mm.210966 NM_001099628 ENSMUSG00000052812 Atad2b 1110014E10Rik|BC032887|C79189|D530031C13Rik ATPase family, AAA domain containing 2B protein-coding common_peak1_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154-5 chr8 122461301 122461768 + 0.30358472802154 NA promoter-TSS (NM_013914) promoter-TSS (NM_013914) -842 NM_013914 30927 Mm.103673 NM_013914 ENSMUSG00000006587 Snai3 AI643946|Smuc|Zfp293 snail family zinc finger 3 protein-coding common_peak1_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154-2 chr4 88787970 88788353 + 0.30358472802154 NA promoter-TSS (NM_001161609).4 promoter-TSS (NM_001161609).4 184 NM_001098840 545650 Mm.473677 NM_001098840 ENSMUSG00000100234 Gm13277 - predicted gene 13277 protein-coding common_peak1_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-3 chr13 45965740 45966373 + 0.30358472802154 NA Intergenic CpG -1065 NM_009124 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-4 chr4 26346246 26346872 + 0.30358472802154 NA promoter-TSS (NM_172865) promoter-TSS (NM_172865) 93 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding unique_peak2_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154 chr13 114456818 114457640 + 0.30358472802154 NA intron (NM_001301375, intron 1 of 5) intron (NM_001301375, intron 1 of 5) 1722 NM_001301373 14313 Mm.4913 NM_008046 ENSMUSG00000021765 Fst AL033346|FS follistatin protein-coding common_peak1_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-2 chr11 116852503 116852980 + 0.30358472802154 NA exon (NM_011358, exon 1 of 3) exon (NM_011358, exon 1 of 3) 353 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak1_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154 chr15 62078680 62079306 + 0.30358472802154 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 39736 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak2_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154 chr18 65431099 65431781 + 0.30358472802154 NA intron (NM_172833, intron 1 of 15) CpG 443 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak2_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-4 chr6 52220531 52221211 + 0.30358472802154 NA Intergenic Intergenic -2298 NM_010455 15404 Mm.294826 NM_010455 ENSMUSG00000038236 Hoxa7 AV118143|Hox-1.1|M6 homeobox A7 protein-coding common_peak1_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-5 chr5 146845323 146846013 + 0.30358472802154 NA exon (NM_026864, exon 2 of 4) exon (NM_026864, exon 2 of 4) 597 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding common_peak2_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-2 chr19 41993932 41994479 + 0.30358472802154 NA intron (NM_145500, intron 1 of 2) intron (NM_145500, intron 1 of 2) 12442 NM_145500 226122 Mm.22948 NM_145500 ENSMUSG00000025171 Ubtd1 BC016129 ubiquitin domain containing 1 protein-coding common_peak1_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154-4 chr7 128318686 128319269 + 0.30358472802154 NA Intergenic Intergenic -20846 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-3 chr19 59338833 59339540 + 0.30358472802154 NA intron (NM_001033222, intron 1 of 4) intron (NM_001033222, intron 1 of 4) 6594 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak1_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154-6 chr8 9131423 9132127 + 0.30358472802154 NA non-coding (NR_045854, exon 1 of 4) non-coding (NR_045854, exon 1 of 4) 513 NR_045854 71249 Mm.158635 NR_045854 ENSMUSG00000108848 4933430N04Rik - RIKEN cDNA 4933430N04 gene ncRNA common_peak2_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154 chr12 71015090 71015604 + 0.30358472802154 NA promoter-TSS (NM_001081195) promoter-TSS (NM_001081195) 476 NR_045056 73204 Mm.363770 NR_045055 ENSMUSG00000085622 3110056K07Rik 4921536K06Rik RIKEN cDNA 3110056K07 gene ncRNA common_peak1_50_43_-0.0687651590733909_5.4250490391006_0.30358472802154-3 chr6 33059437 33060186 + 0.30358472802154 NA intron (NM_001355667, intron 1 of 8) intron (NM_001355667, intron 1 of 8) 449 NM_001355667 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding common_peak1_51_42_-0.00778155982022888_5.42237397479198_0.30358472802154 chr10 91171829 91172364 + 0.30358472802154 NA promoter-TSS (NM_011605) promoter-TSS (NM_011605) -477 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_210_170_0.00703443927273817_7.42136973452227_0.303569743952439 chr8 69716075 69716886 + 0.303569743952439 NA 5' UTR (NM_001359086, exon 1 of 6) 5' UTR (NM_001359086, exon 1 of 6) 422 NM_001039967 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding common_peak1_211_171_0.00539534142127351_7.42896242541273_0.303554977807079 chr10 128035052 128036991 + 0.303554977807079 NA intron (NM_013608, intron 1 of 7) CpG 675 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding common_peak1_210_174_-0.0263241576736926_7.43804903299548_0.303540382371417 chr19 6140331 6141904 + 0.303540382371417 NA promoter-TSS (NM_019722) promoter-TSS (NM_019722) 20 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak1_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-3 chr8 3413169 3413835 + 0.303525995925004 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 20494 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-4 chr8 102785340 102786033 + 0.303525995925004 NA promoter-TSS (NM_009866) promoter-TSS (NM_009866) -575 NM_009866 12552 Mm.1571 NM_009866 ENSMUSG00000031673 Cdh11 Cad11|OSF-4 cadherin 11 protein-coding unique_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004 chr4 83417752 83418349 + 0.303525995925004 NA non-coding (NR_152448, exon 1 of 12) non-coding (NR_152448, exon 1 of 12) 326 NM_029949 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-7 chr5 137294090 137294893 + 0.303525995925004 NA promoter-TSS (NM_027356) promoter-TSS (NM_027356) -178 NM_027356 70240 Mm.124666 NM_027356 ENSMUSG00000051502 Ufsp1 2700038N03Rik|D5Ertd655e UFM1-specific peptidase 1 protein-coding common_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004 chr11 101230969 101231384 + 0.303525995925004 NA Intergenic Intergenic -4713 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-2 chr17 73633119 73633881 + 0.303525995925004 NA intron (NM_027864, intron 1 of 14) intron (NM_027864, intron 1 of 14) 76951 NM_027864 71685 Mm.271953 NM_027864 ENSMUSG00000024064 Galnt14 0610033M06Rik polypeptide N-acetylgalactosaminyltransferase 14 protein-coding common_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-3 chr4 116150595 116151376 + 0.303525995925004 NA promoter-TSS (NM_001290658) promoter-TSS (NM_001290658) -446 NM_001290658 68273 Mm.196045 NM_026651 ENSMUSG00000028700 Pomgnt1 0610016I07Rik|4930467B06Rik protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein-coding common_peak2_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-4 chr7 100590970 100591597 + 0.303525995925004 NA non-coding (NR_153425, exon 1 of 8) non-coding (NR_153425, exon 1 of 8) 131 NR_153425 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e|L48mt|MRP-L48 mitochondrial ribosomal protein L48 protein-coding common_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-2 chr19 18670915 18671460 + 0.303525995925004 NA exon (NM_026120, exon 1 of 8) exon (NM_026120, exon 1 of 8) 407 NM_026120 67383 Mm.306602 NM_026120 ENSMUSG00000024726 Carnmt1 2410127L17Rik carnosine N-methyltransferase 1 protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-5 chr6 91563399 91564044 + 0.303525995925004 NA Intergenic Intergenic 47686 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-6 chr9 25591269 25591944 + 0.303525995925004 NA intron (NM_026189, intron 6 of 7) intron (NM_026189, intron 6 of 7) 110009 NM_026189 67484 Mm.112977 NM_026189 ENSMUSG00000036611 Eepd1 2310005P05Rik|AI481005 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding common_peak1_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004 chr12 75544657 75545393 + 0.303525995925004 NA intron (NM_012024, intron 2 of 13) (TTTTG)n|Simple_repeat|Simple_repeat 51175 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak2_53_43_0.0131152322628623_5.46598923476873_0.303525995925004 chr15 43477299 43477692 + 0.303525995925004 NA promoter-TSS (NR_046064) promoter-TSS (NR_046064) 266 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding common_peak2_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-5 chr8 25806402 25806741 + 0.303525995925004 NA Intergenic Intergenic -1903 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-6 chr8 47939572 47940181 + 0.303525995925004 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 50675 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004 chr11 5761794 5762541 + 0.303525995925004 NA promoter-TSS (NR_015577) promoter-TSS (NR_015577) 17 NR_015577 76508 Mm.260203 NR_015577 ENSMUSG00000083844 Ube2d-ps 1600028I17Rik|2210015D19Rik|AI596465 ubiquitin-conjugating enzyme E2D, pseudogene ncRNA common_peak2_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-2 chr17 34604290 34605010 + 0.303525995925004 NA Intergenic Intergenic -1089 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding common_peak2_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-3 chr18 35823013 35823664 + 0.303525995925004 NA Intergenic Intergenic -6450 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-6 chr5 31615984 31617154 + 0.303525995925004 NA intron (NM_025796, intron 3 of 3) intron (NM_025796, intron 3 of 3) 2618 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-3 chr18 80533992 80534319 + 0.303525995925004 NA Intergenic Intergenic 10391 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-3 chr19 32210243 32210966 + 0.303525995925004 NA intron (NM_144792, intron 5 of 9) intron (NM_144792, intron 5 of 9) 409 NM_001168526 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-4 chr7 144025620 144025989 + 0.303525995925004 NA Intergenic Intergenic 16550 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak2_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004 chr14 21750605 21751247 + 0.303525995925004 NA promoter-TSS (NM_001359953) promoter-TSS (NM_001359953) 395 NM_001359954 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-2 chr11 88204438 88204825 + 0.303525995925004 NA 5' UTR (NM_001291271, exon 1 of 5) 5' UTR (NM_001291271, exon 1 of 5) 243 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak1_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-2 chr15 66860779 66861393 + 0.303525995925004 NA Intergenic Intergenic -29257 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-5 chr3 88562988 88563497 + 0.303525995925004 NA exon (NM_033526, exon 6 of 11) exon (NM_033526, exon 6 of 11) 9526 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-7 chr8 89040742 89041127 + 0.303525995925004 NA intron (NM_021390, intron 2 of 3) intron (NM_021390, intron 2 of 3) 3228 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-8 chr8 33386396 33386947 + 0.303525995925004 NA exon (NM_001098233, exon 1 of 2) exon (NM_001098233, exon 1 of 2) 346 NM_001098233 75029 Mm.159402 NM_152821 ENSMUSG00000049184 Purg 4930486B15Rik purine-rich element binding protein G protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004 chr1 88874138 88874862 + 0.303525995925004 NA Intergenic Intergenic 119610 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-3 chr11 97659615 97660521 + 0.303525995925004 NA Intergenic CpG -3344 NM_139311 246198 Mm.23685 NM_139311 ENSMUSG00000038437 Mllt6 AI315037|Af17 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 protein-coding common_peak2_51_44_-0.0733699014478058_5.45516814560577_0.303525995925004-4 chr4 118428232 118428714 + 0.303525995925004 NA intron (NM_001039175, intron 1 of 6) intron (NM_001039175, intron 1 of 6) 380 NM_019422 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding common_peak2_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-4 chr19 28296382 28297120 + 0.303525995925004 NA intron (NM_175459, intron 8 of 10) intron (NM_175459, intron 8 of 10) -285585 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-5 chr8 106400090 106400562 + 0.303525995925004 NA Intergenic Intergenic -15013 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-5 chr2 25557986 25558671 + 0.303525995925004 NA intron (NM_021519, intron 1 of 4) intron (NM_021519, intron 1 of 4) 428 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak2_52_43_-0.0136615633674371_5.45260083695358_0.303525995925004-2 chr16 55534360 55535262 + 0.303525995925004 NA Intergenic Intergenic 40080 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-4 chr13 45950892 45951644 + 0.303525995925004 NA intron (NM_001199304, intron 2 of 6) intron (NM_001199304, intron 2 of 6) 13723 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_53_43_0.0131152322628623_5.46598923476873_0.303525995925004-6 chr8 70760434 70760673 + 0.303525995925004 NA intron (NM_183170, intron 1 of 4) intron (NM_183170, intron 1 of 4) 368 NM_183170 234384 Mm.213010 NM_183170 ENSMUSG00000035559 Mpv17l2 Fksg24 MPV17 mitochondrial membrane protein-like 2 protein-coding common_peak2_214_177_-0.0239439611495751_7.46376145039161_0.303497591224554 chr10 60817301 60819123 + 0.303497591224554 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 13369 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak1_214_177_-0.0239439611495751_7.46376145039161_0.303497591224554 chr10 60817286 60819158 + 0.303497591224554 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 13359 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-2 chr3 105058398 105058976 + 0.303469903643781 NA Intergenic Intergenic -5541 NM_030249 80281 Mm.200327 NM_030249 ENSMUSG00000062127 Cttnbp2nl AA552995|AA589392|AU018624|BC003236|mKIAA1433 CTTNBP2 N-terminal like protein-coding common_peak2_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-4 chr4 105403979 105404547 + 0.303469903643781 NA Intergenic Intergenic 246916 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-7 chr8 36026717 36027172 + 0.303469903643781 NA Intergenic Intergenic -67884 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-6 chr5 148552258 148552753 + 0.303469903643781 NA promoter-TSS (NM_001359201) promoter-TSS (NM_001359201) 283 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak1_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-2 chr3 98417638 98418551 + 0.303469903643781 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 35613 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding common_peak2_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-5 chr7 112467549 112468034 + 0.303469903643781 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 40085 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak2_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-3 chr11 101301707 101302275 + 0.303469903643781 NA intron (NM_001359819, intron 1 of 10) CpG 295 NM_019584 56208 Mm.178947 NM_019584 ENSMUSG00000035086 Becn1 Atg6 beclin 1, autophagy related protein-coding common_peak2_54_44_0.00697920502126426_5.49534269884031_0.303469903643781 chr14 61647928 61648723 + 0.303469903643781 NA intron (NR_028264, intron 1 of 6) CpG -16215 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak1_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-2 chr15 3995456 3995765 + 0.303469903643781 NA promoter-TSS (NR_045740) promoter-TSS (NR_045740) 142 NM_145930 106064 Mm.21299 NM_145930 ENSMUSG00000041935 AW549877 AI195826 expressed sequence AW549877 protein-coding common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-2 chr11 29526173 29526726 + 0.303469903643781 NA promoter-TSS (NM_133767) promoter-TSS (NM_133767) 52 NM_133767 76784 Mm.285429 NM_133767 ENSMUSG00000020459 Mtif2 2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt) mitochondrial translational initiation factor 2 protein-coding common_peak2_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-2 chr11 33162433 33162933 + 0.303469903643781 NA intron (NM_008722, intron 1 of 10) CpG 523 NM_001252261 18148 Mm.485384 NM_008722 ENSMUSG00000057113 Npm1 B23|NO38|Npm nucleophosmin 1 protein-coding common_peak1_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-4 chr19 5940585 5940940 + 0.303469903643781 NA TTS (NM_001164057) TTS (NM_001164057) -15946 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak2_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-2 chr2 158229399 158229962 + 0.303469903643781 NA promoter-TSS (NM_177657) promoter-TSS (NM_177657) -456 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-4 chr15 103221098 103221560 + 0.303469903643781 NA intron (NM_001358950, intron 1 of 4) intron (NM_001358950, intron 1 of 4) -5977 NM_001110216 12419 Mm.262059 NM_007626 ENSMUSG00000009575 Cbx5 2610029O15Rik|C75991|HP1|Hp1a|Hp1alpha chromobox 5 protein-coding common_peak2_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-5 chr8 46000135 46000668 + 0.303469903643781 NA promoter-TSS (NM_001039562) promoter-TSS (NM_001039562) -551 NM_001039562 654824 Mm.334517 NM_001039562 ENSMUSG00000050914 Ankrd37 - ankyrin repeat domain 37 protein-coding common_peak2_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-3 chr5 36483447 36484069 + 0.303469903643781 NA promoter-TSS (NM_025725) promoter-TSS (NM_025725) 527 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding common_peak1_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-3 chr6 108709667 108710395 + 0.303469903643781 NA Intergenic Intergenic -49097 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-6 chr7 139971763 139972207 + 0.303469903643781 NA TTS (NM_001347613) TTS (NM_001347613) 6770 NM_001347614 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-6 chr8 27128179 27128584 + 0.303469903643781 NA intron (NM_025686, intron 1 of 3) intron (NM_025686, intron 1 of 3) 251 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak1_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781 chr17 45563982 45564714 + 0.303469903643781 NA intron (NM_001357105, intron 1 of 3) CpG 412 NM_001357105 73836 Mm.289716 NM_028662 ENSMUSG00000037089 Slc35b2 1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1 solute carrier family 35, member B2 protein-coding common_peak1_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-3 chr15 102470776 102471195 + 0.303469903643781 NA intron (NM_001174073, intron 1 of 12) CpG 353 NM_001174073 18521 Mm.236513 NM_011042 ENSMUSG00000056851 Pcbp2 AW412548|Hnrpx|alphaCP-2 poly(rC) binding protein 2 protein-coding common_peak1_54_44_0.00697920502126426_5.49534269884031_0.303469903643781 chr1 71865195 71865860 + 0.303469903643781 NA Intergenic Intergenic -22585 NR_027659 667931 Mm.214128 NR_027658 ENSMUSG00000099707 Gm8883 EG667931|Gm554 predicted gene 8883 ncRNA common_peak1_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-5 chr2 91710270 91710888 + 0.303469903643781 NA promoter-TSS (NM_145528) promoter-TSS (NM_145528) 13 NM_145528 51897 Mm.28492 NM_145528 ENSMUSG00000027244 Atg13 1110053A20Rik|D2Ertd391e|Harbi1 autophagy related 13 protein-coding common_peak2_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-3 chr9 41579657 41580328 + 0.303469903643781 NA intron (NR_131930, intron 3 of 3) intron (NR_131930, intron 3 of 3) -1261 NR_015483 73144 Mm.38166 NM_001033153 ENSMUSG00000074415 3110039I08Rik 2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg RIKEN cDNA 3110039I08 gene ncRNA common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-3 chr13 110930031 110930454 + 0.303469903643781 NA Intergenic Intergenic -26396 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak1_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781-4 chr7 80024851 80025831 + 0.303469903643781 NA promoter-TSS (NM_175433) promoter-TSS (NM_175433) 527 NM_001146000 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak2_54_44_0.00697920502126426_5.49534269884031_0.303469903643781-4 chr5 139795181 139795980 + 0.303469903643781 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 4044 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781 chr10 37136547 37137061 + 0.303469903643781 NA exon (NM_008538, exon 2 of 2) exon (NM_008538, exon 2 of 2) 2122 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak2_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781 chr17 21566501 21567339 + 0.303469903643781 NA promoter-TSS (NM_001357347) promoter-TSS (NM_001357347) -58 NM_001002008 381066 Mm.441097 NM_001002008 ENSMUSG00000067931 Zfp948 - zinc finger protein 948 protein-coding common_peak2_53_45_-0.0510151051568535_5.49805440347859_0.303469903643781 chr1 13589114 13589820 + 0.303469903643781 NA intron (NM_028173, intron 1 of 10) CpG 443 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak1_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-5 chr2 136890946 136891417 + 0.303469903643781 NA promoter-TSS (NM_028201) promoter-TSS (NM_028201) -37 NM_028201 74243 Mm.330612 NM_028201 ENSMUSG00000027281 Slx4ip 2210009G21Rik|2410004I22Rik|C85661|Slxip SLX4 interacting protein protein-coding common_peak2_52_45_-0.0777919007871528_5.48466600566344_0.303469903643781-4 chr9 77910807 77911402 + 0.303469903643781 NA Intergenic Intergenic -6261 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak2_493_403_-0.0147148366890626_8.65085406440726_0.303463781111983 chr15 36792523 36794738 + 0.303463781111983 NA 5' UTR (NM_011740, exon 2 of 7) 5' UTR (NM_011740, exon 2 of 7) 908 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-3 chr18 76943866 76944403 + 0.303416277109641 NA promoter-TSS (NM_029826) promoter-TSS (NM_029826) 19 NM_001039202 76987 Mm.236127 NM_029826 ENSMUSG00000025421 Hdhd2 0610039H12Rik|3110052N05Rik haloacid dehalogenase-like hydrolase domain containing 2 protein-coding common_peak1_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-3 chr11 53770181 53770915 + 0.303416277109641 NA promoter-TSS (NM_001159396) promoter-TSS (NM_001159396) 75 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-6 chr9 67634081 67634675 + 0.303416277109641 NA Intergenic Intergenic -74675 NM_001081242 70549 Mm.33645 NM_027458 ENSMUSG00000052698 Tln2 5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320 talin 2 protein-coding common_peak1_54_46_-0.0557565503266986_5.52671057651429_0.303416277109641-2 chr15 81872559 81872938 + 0.303416277109641 NA promoter-TSS (NM_026737) promoter-TSS (NM_026737) 285 NM_080633 11429 Mm.154581 NM_080633 ENSMUSG00000022477 Aco2 Aco-2|Aco3|D10Wsu183e aconitase 2, mitochondrial protein-coding common_peak1_54_46_-0.0557565503266986_5.52671057651429_0.303416277109641 chr15 80053499 80054119 + 0.303416277109641 NA Intergenic Intergenic 24770 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-4 chr3 89393930 89394640 + 0.303416277109641 NA promoter-TSS (NR_040404) promoter-TSS (NR_040404) -5 NR_040404 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 - predicted gene 15417 ncRNA common_peak2_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-5 chr4 136442092 136442573 + 0.303416277109641 NA 5' UTR (NM_001285484, exon 2 of 2) 5' UTR (NM_001285484, exon 2 of 2) 17720 NM_001285484 15552 Mm.40573 NM_008309 ENSMUSG00000070687 Htr1d 5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db 5-hydroxytryptamine (serotonin) receptor 1D protein-coding common_peak2_54_46_-0.0557565503266986_5.52671057651429_0.303416277109641 chr10 127667123 127667634 + 0.303416277109641 NA promoter-TSS (NM_001122895) promoter-TSS (NM_001122895) 255 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA common_peak1_54_46_-0.0557565503266986_5.52671057651429_0.303416277109641-4 chr3 136669328 136669825 + 0.303416277109641 NA promoter-TSS (NM_001293622) promoter-TSS (NM_001293622) -490 NM_008913 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-4 chr6 91563382 91564080 + 0.303416277109641 NA Intergenic Intergenic 47696 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_55_45_0.00108215816166712_5.52410303513785_0.303416277109641 chr1 54829334 54830051 + 0.303416277109641 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 96695 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_55_45_0.00108215816166712_5.52410303513785_0.303416277109641 chr12 75595752 75596247 + 0.303416277109641 NA 5' UTR (NM_012024, exon 1 of 14) 5' UTR (NM_012024, exon 1 of 14) 201 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-2 chr1 135793473 135794470 + 0.303416277109641 NA Intergenic Intergenic -5450 NM_021467 21952 Mm.44379 NM_021467 ENSMUSG00000026418 Tnni1 2700018B22Rik|AI747285|ssTnI troponin I, skeletal, slow 1 protein-coding common_peak2_55_45_0.00108215816166712_5.52410303513785_0.303416277109641-2 chr16 17452025 17452847 + 0.303416277109641 NA 5' UTR (NM_001277231, exon 1 of 2) 5' UTR (NM_001277231, exon 1 of 2) 451 NM_007764 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding common_peak1_54_46_-0.0557565503266986_5.52671057651429_0.303416277109641-3 chr18 75384324 75385080 + 0.303416277109641 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 17337 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_228_184_0.0107768674958821_7.53676989426425_0.303377544836069 chr8 34055004 34057227 + 0.303377544836069 NA Intergenic Intergenic 51699 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384-3 chr17 63863161 63863806 + 0.303364957229384 NA promoter-TSS (NM_001037997) promoter-TSS (NM_001037997) -498 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak1_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384 chr11 35834028 35834476 + 0.303364957229384 NA intron (NM_025936, intron 1 of 14) intron (NM_025936, intron 1 of 14) 276 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak1_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384 chr10 81863873 81864249 + 0.303364957229384 NA intron (NM_001243067, intron 1 of 3).2 CpG 127 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak1_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-4 chr3 144992757 144993249 + 0.303364957229384 NA Intergenic Intergenic -17958 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak1_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384-3 chr11 60931108 60931753 + 0.303364957229384 NA promoter-TSS (NM_008928) promoter-TSS (NM_008928) 437 NR_027800 24082 Mm.46270 NM_025293 ENSMUSG00000042549 Map2k3os F3-1|Gm16516|Gtlf3a mitogen-activated protein kinase kinase 3, opposite strand ncRNA common_peak2_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-3 chr6 140424133 140424800 + 0.303364957229384 NA intron (NM_144920, intron 2 of 30) CpG-12548 367 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak2_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384 chr17 35697156 35697807 + 0.303364957229384 NA intron (NM_172962, intron 1 of 16) intron (NM_172962, intron 1 of 16) 3109 NM_001198833 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak1_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384-2 chr10 93311181 93311881 + 0.303364957229384 NA promoter-TSS (NM_013508) promoter-TSS (NM_013508) -372 NM_001322265 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-2 chr14 8102622 8103584 + 0.303364957229384 NA intron (NM_001360314, intron 1 of 19) intron (NM_001360314, intron 1 of 19) 4892 NM_001360315 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|Monaka|Slob PX domain containing serine/threonine kinase protein-coding common_peak2_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-4 chr8 105851459 105851999 + 0.303364957229384 NA intron (NM_177150, intron 1 of 12) intron (NM_177150, intron 1 of 12) 279 NM_177150 320394 Mm.334775 NM_177150 ENSMUSG00000036672 Cenpt G630055P03Rik centromere protein T protein-coding common_peak2_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-5 chrX 140664837 140665775 + 0.303364957229384 NA intron (NM_001358367, intron 1 of 9) CpG 350 NM_001358366 23947 Mm.131097 NM_011845 ENSMUSG00000000266 Mid2 FXY2|Trim1 midline 2 protein-coding common_peak1_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-3 chr2 26909727 26910454 + 0.303364957229384 NA promoter-TSS (NM_013721) promoter-TSS (NM_013721) 552 NM_011513 20933 Mm.397932 NM_011513 ENSMUSG00000015776 Med22 AW212655|AW558812|Surf-5|Surf5 mediator complex subunit 22 protein-coding common_peak1_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384-4 chr16 4913361 4913714 + 0.303364957229384 NA intron (NM_001357062, intron 4 of 17) intron (NM_001357062, intron 4 of 17) -25574 NM_001316715 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding common_peak2_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-2 chr11 80209171 80209557 + 0.303364957229384 NA intron (NM_001163355, intron 1 of 19) CpG 309 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding common_peak2_56_46_-0.00458979490503619_5.55229395422512_0.303364957229384-2 chr17 46278110 46278843 + 0.303364957229384 NA intron (NM_028751, intron 2 of 10) intron (NM_028751, intron 2 of 10) 4550 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384-5 chr6 116192699 116193355 + 0.303364957229384 NA intron (NM_177412, intron 1 of 5) intron (NM_177412, intron 1 of 5) 347 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak2_55_47_-0.0603183865024759_5.55480330746992_0.303364957229384 chr10 127288817 127289651 + 0.303364957229384 NA promoter-TSS (NM_033072) promoter-TSS (NM_033072) -216 NM_033072 110962 Mm.372826 NM_033072 ENSMUSG00000025409 Mbd6 D10Wsu93e methyl-CpG binding domain protein 6 protein-coding common_peak1_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-4 chr13 90088990 90089447 + 0.303315798308572 NA promoter-TSS (NM_025335) promoter-TSS (NM_025335) 390 NM_028012 108138 Mm.37531 NM_028012 ENSMUSG00000021615 Xrcc4 2310057B22Rik|AW413319|AW545101 X-ray repair complementing defective repair in Chinese hamster cells 4 protein-coding common_peak2_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572-2 chr5 113540694 113541725 + 0.303315798308572 NA Intergenic Intergenic -9211 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-3 chr17 70728108 70728853 + 0.303315798308572 NA intron (NM_001347411, intron 9 of 14) PB1D10|SINE|Alu 118297 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572 chr4 136570422 136570972 + 0.303315798308572 NA intron (NM_001356567, intron 6 of 19) intron (NM_001356567, intron 6 of 19) 32026 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak2_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-2 chr6 34601581 34602516 + 0.303315798308572 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 3544 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak2_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572 chr18 36559307 36560172 + 0.303315798308572 NA promoter-TSS (NM_175375) promoter-TSS (NM_175375) -864 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572 chr1 177257368 177258151 + 0.303315798308572 NA Intergenic CpG -8992 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak2_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-3 chr9 57467021 57467939 + 0.303315798308572 NA intron (NM_001301635, intron 1 of 5) intron (NM_001301635, intron 1 of 5) 580 NM_001301634 56807 Mm.102278 NM_020270 ENSMUSG00000040722 Scamp5 Sc5 secretory carrier membrane protein 5 protein-coding common_peak1_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-2 chr11 58329879 58330504 + 0.303315798308572 NA promoter-TSS (NM_001161338) promoter-TSS (NM_001161338) 148 NM_001256520 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak2_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-3 chr7 141469101 141469632 + 0.303315798308572 NA intron (NM_001111049, intron 3 of 7) intron (NM_001111049, intron 3 of 7) 577 NM_001111050 12476 Mm.30246 NM_009842 ENSMUSG00000025510 Cd151 PETA-3|SFA-1|Tspan24 CD151 antigen protein-coding common_peak1_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572-4 chr16 23419997 23420709 + 0.303315798308572 NA Intergenic Intergenic -8780 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572-3 chr7 143979030 143980018 + 0.303315798308572 NA Intergenic Intergenic -29730 NR_037292 100526562 NR_037292 ENSMUSG00000093221 Mir3105 mmu-mir-3105 microRNA 3105 ncRNA common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-7 chr9 46273212 46274045 + 0.303315798308572 NA exon (NM_011752, exon 2 of 14) exon (NM_011752, exon 2 of 14) 564 NM_011752 22687 Mm.17519 NM_011752 ENSMUSG00000032078 Zpr1 AI303781|Zfp259|Znf259 ZPR1 zinc finger protein-coding common_peak1_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-5 chr2 155591845 155592646 + 0.303315798308572 NA intron (NM_008180, intron 1 of 12) intron (NM_008180, intron 1 of 12) 565 NM_001291111 14854 Mm.252316 NM_008180 ENSMUSG00000027610 Gss AI314904|GS-A/GS-B|GSH-S glutathione synthetase protein-coding common_peak1_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572-2 chr11 23256135 23257373 + 0.303315798308572 NA intron (NM_001035226, intron 2 of 25) GC_rich|Low_complexity|Low_complexity 713 NM_134014 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak1_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-3 chr13 70731714 70732359 + 0.303315798308572 NA intron (NM_172053, intron 21 of 22) intron (NM_172053, intron 21 of 22) -94402 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-4 chr2 104815874 104816767 + 0.303315798308572 NA intron (NM_001123327, intron 1 of 11) CpG 376 NM_001123327 99003 Mm.274314 NM_001123327 ENSMUSG00000074994 Qser1 4732486I23Rik|AI502974 glutamine and serine rich 1 protein-coding common_peak1_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572 chr11 6528051 6528706 + 0.303315798308572 NA intron (NR_045893, intron 1 of 3) intron (NR_045893, intron 1 of 3) 382 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974 small nucleolar RNA host gene 15 ncRNA common_peak1_57_47_-0.0100494793438894_5.57993776104921_0.303315798308572-3 chr16 8863717 8864489 + 0.303315798308572 NA Intergenic Intergenic 34003 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-5 chr2 148879005 148879647 + 0.303315798308572 NA Intergenic Intergenic -3814 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak2_58_47_0.0144385846015238_5.59218179302192_0.303315798308572 chr18 24751747 24752329 + 0.303315798308572 NA intron (NM_001289654, intron 1 of 24) intron (NM_001289654, intron 1 of 24) 43415 NM_001289655 225288 Mm.329322 NM_175276 ENSMUSG00000034295 Fhod3 A930009H06Rik|FHOS2|mKIAA1695 formin homology 2 domain containing 3 protein-coding common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-6 chr8 115701074 115701966 + 0.303315798308572 NA Intergenic Intergenic 5374 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-6 chr6 84008267 84009031 + 0.303315798308572 NA promoter-TSS (NM_001077694) promoter-TSS (NM_001077694) 51 NM_001077694 26903 Mm.220982 NM_021469 ENSMUSG00000033788 Dysf 2310004N10Rik|AI604795|D6Pas3 dysferlin protein-coding common_peak1_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572 chr1 166379398 166379952 + 0.303315798308572 NA intron (NM_030245, intron 1 of 7) CpG 508 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak1_58_47_0.0144385846015238_5.59218179302192_0.303315798308572-2 chr16 20517039 20517633 + 0.303315798308572 NA exon (NM_001347176, exon 1 of 16) exon (NM_001347176, exon 1 of 16) 350 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 b2b2866Clo dishevelled segment polarity protein 3 protein-coding common_peak2_56_48_-0.0647107873426069_5.5823544504439_0.303315798308572-2 chr5 115158526 115159160 + 0.303315798308572 NA promoter-TSS (NM_175403) promoter-TSS (NM_175403) -667 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_235_190_0.00786229814044237_7.58135997710597_0.303303799151017 chr2 145785518 145787575 + 0.303303799151017 NA intron (NM_028724, intron 2 of 12) intron (NM_028724, intron 2 of 12) 430 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding common_peak2_237_192_0.00492291049601246_7.59491849251609_0.303280236208594 chr11 96975900 96977736 + 0.303280236208594 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 870 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_57_49_-0.0689431683974577_5.609384605576_0.303268666669768-2 chr2 31068222 31068821 + 0.303268666669768 NA intron (NM_001355105, intron 6 of 15) intron (NM_001355105, intron 6 of 15) 27979 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-5 chr2 151979578 151980087 + 0.303268666669768 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 387 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_57_49_-0.0689431683974577_5.609384605576_0.303268666669768-2 chr15 97906503 97907089 + 0.303268666669768 NA intron (NM_009504, intron 1 of 9) intron (NM_009504, intron 1 of 9) 1500 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding common_peak1_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768 chr10 96628893 96629526 + 0.303268666669768 NA Intergenic Intergenic 12208 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_59_48_0.00876772151067673_5.61909370487055_0.303268666669768-2 chr11 115842493 115843547 + 0.303268666669768 NA intron (NM_001252532, intron 2 of 25) B4|SINE|B4 18962 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 LLGL2 scribble cell polarity complex component protein-coding common_peak2_57_49_-0.0689431683974577_5.609384605576_0.303268666669768-3 chr6 145862641 145863284 + 0.303268666669768 NA exon (NM_024469, exon 5 of 5) exon (NM_024469, exon 5 of 5) 2458 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-4 chr8 73197490 73198247 + 0.303268666669768 NA intron (NM_001317391, intron 3 of 15) intron (NM_001317391, intron 3 of 15) 155672 NM_001317391 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_57_49_-0.0689431683974577_5.609384605576_0.303268666669768 chr15 66805501 66806343 + 0.303268666669768 NA intron (NM_001029841, intron 1 of 7) PB1D11|SINE|Alu 25907 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-2 chr15 64622126 64622631 + 0.303268666669768 NA Intergenic Intergenic -239459 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-2 chr13 34407963 34408741 + 0.303268666669768 NA Intergenic Intergenic -63170 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak1_59_48_0.00876772151067673_5.61909370487055_0.303268666669768-3 chr8 124959830 124960574 + 0.303268666669768 NA Intergenic Intergenic -10948 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_59_48_0.00876772151067673_5.61909370487055_0.303268666669768 chr11 69662330 69663293 + 0.303268666669768 NA promoter-TSS (NM_001301710) promoter-TSS (NM_001301710) -162 NM_011900 24070 Mm.89579 NM_011900 ENSMUSG00000018761 Mpdu1 LEC35|SL15|Supl15h mannose-P-dolichol utilization defect 1 protein-coding common_peak1_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-3 chr2 117901796 117902874 + 0.303268666669768 NA intron (NR_040631, intron 3 of 5) RMER17C|LTR|ERVK 80407 NR_040631 73938 Mm.399107 NR_040631 ENSMUSG00000086221 4930412B13Rik - RIKEN cDNA 4930412B13 gene ncRNA common_peak2_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-4 chr2 72980602 72980944 + 0.303268666669768 NA promoter-TSS (NM_001018042) promoter-TSS (NM_001018042) -327 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak1_57_49_-0.0689431683974577_5.609384605576_0.303268666669768-3 chr3 53110172 53111019 + 0.303268666669768 NA intron (NM_175386, intron 2 of 3) MLT1B|LTR|ERVL-MaLR 69048 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_57_49_-0.0689431683974577_5.609384605576_0.303268666669768 chr11 88204459 88205042 + 0.303268666669768 NA intron (NM_001291271, intron 1 of 4) intron (NM_001291271, intron 1 of 4) 362 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak1_57_49_-0.0689431683974577_5.609384605576_0.303268666669768-4 chr7 19226999 19228008 + 0.303268666669768 NA promoter-TSS (NM_207525) promoter-TSS (NM_207525) -886 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak1_59_48_0.00876772151067673_5.61909370487055_0.303268666669768 chr11 70687628 70688572 + 0.303268666669768 NA promoter-TSS (NM_178116) promoter-TSS (NM_178116) 5 NM_001190376 216874 Mm.473726 NM_178116 ENSMUSG00000040712 Camta2 Kiaa0909-hp|mKIAA0909 calmodulin binding transcription activator 2 protein-coding common_peak2_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768 chr13 75825168 75825914 + 0.303268666669768 NA Intergenic Intergenic -14344 NM_001360151 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_58_49_-0.0444551044520445_5.6216286375487_0.303268666669768-3 chr16 14361632 14362202 + 0.303268666669768 NA intron (NM_008576, intron 1 of 30) intron (NM_008576, intron 1 of 30) 359 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak2_236_195_-0.0233615551857218_7.60302906652235_0.303268636927619 chr7 99351065 99353094 + 0.303268636927619 NA intron (NM_001111043, intron 1 of 5) intron (NM_001111043, intron 1 of 5) 1160 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_236_195_-0.0233615551857218_7.60302906652235_0.303268636927619 chr7 99351068 99353108 + 0.303268636927619 NA intron (NM_001111043, intron 1 of 5) intron (NM_001111043, intron 1 of 5) 1151 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-6 chr9 63896184 63896509 + 0.303223439438798 NA Intergenic Intergenic 125713 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-3 chr13 59585347 59585868 + 0.303223439438798 NA promoter-TSS (NR_045633) promoter-TSS (NR_045633) 274 NM_030153 78689 Mm.253902 NM_030153 ENSMUSG00000021555 Naa35 A330021G12Rik|A330027C19Rik|AI158944|C030004C14Rik|Mak10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding common_peak1_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-4 chr2 37452255 37452667 + 0.303223439438798 NA intron (NM_001033960, intron 1 of 18) CpG 207 NM_001033960 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak1_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-5 chr7 143784351 143785128 + 0.303223439438798 NA promoter-TSS (NM_175534) promoter-TSS (NM_175534) -239 NM_175534 244238 Mm.183561 NM_175534 ENSMUSG00000048965 Mrgpre C130069N09Rik|Ebrt3|Mgrf|MrgE MAS-related GPR, member E protein-coding common_peak2_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-5 chr7 25317051 25317764 + 0.303223439438798 NA 5' UTR (NM_001160400, exon 1 of 41) 5' UTR (NM_001160400, exon 1 of 41) 243 NM_001160400 269878 Mm.38527 NM_001160400 ENSMUSG00000045039 Megf8 AW049492|Egfl4|b2b1702.2Clo|b2b1702Clo|b2b288Clo|m687Ddg|mKIAA0817 multiple EGF-like-domains 8 protein-coding common_peak2_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-4 chr6 146527910 146528470 + 0.303223439438798 NA Intergenic Intergenic -25967 NM_019923 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_60_49_0.00329987952815181_5.6455061295388_0.303223439438798 chr12 83987716 83988738 + 0.303223439438798 NA exon (NM_134188, exon 1 of 3) exon (NM_134188, exon 1 of 3) 366 NM_134188 171210 Mm.371675 NM_134188 ENSMUSG00000021226 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 protein-coding common_peak1_60_49_0.00329987952815181_5.6455061295388_0.303223439438798 chr1 106717670 106718443 + 0.303223439438798 NA Intergenic Intergenic -3766 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-2 chr12 73809534 73810343 + 0.303223439438798 NA Intergenic Intergenic -91386 NM_001313920 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-2 chr14 54106341 54107215 + 0.303223439438798 NA Intergenic Intergenic 147151 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-6 chr8 3411772 3412578 + 0.303223439438798 NA intron (NM_133962, intron 1 of 19) PB1D10|SINE|Alu 19167 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_60_49_0.00329987952815181_5.6455061295388_0.303223439438798-3 chr5 129786523 129786988 + 0.303223439438798 NA promoter-TSS (NM_009838) promoter-TSS (NM_009838) 498 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding common_peak1_59_50_-0.0489477763456101_5.64795145379869_0.303223439438773-2 chr5 108628933 108629647 + 0.303223439438773 NA promoter-TSS (NM_028223) promoter-TSS (NM_028223) 487 NM_001359924 231580 Mm.276647 NM_153569 ENSMUSG00000062234 Gak D130045N16Rik cyclin G associated kinase protein-coding common_peak1_59_50_-0.0489477763456101_5.64795145379869_0.303223439438773 chr11 86574706 86575681 + 0.303223439438773 NA Intergenic ID4|SINE|ID 8965 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_59_50_-0.0489477763456101_5.64795145379869_0.303223439438773-3 chr7 104218970 104220097 + 0.303223439438773 NA intron (NM_001013616, intron 1 of 7) intron (NM_001013616, intron 1 of 7) 738 NM_001013616 94088 Mm.274843 NM_001013616 ENSMUSG00000072244 Trim6 C430046K18Rik|D7Ertd684e tripartite motif-containing 6 protein-coding common_peak2_59_50_-0.0489477763456101_5.64795145379869_0.303223439438773 chr5 92933382 92933892 + 0.303223439438773 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 35644 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak1_243_197_0.00368949007677877_7.631201365118_0.303223411463136 chr1 16104215 16106830 + 0.303223411463136 NA promoter-TSS (NM_133832) promoter-TSS (NM_133832) -360 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_244_201_-0.0193063997783485_7.64855828286262_0.303201477121424 chr4 130173097 130175945 + 0.303201477121424 NA intron (NM_023476, intron 1 of 11) intron (NM_023476, intron 1 of 11) 281 NM_001168333 94242 Mm.15801 NM_023476 ENSMUSG00000028776 Tinagl1 1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl tubulointerstitial nephritis antigen-like 1 protein-coding common_peak1_60_51_-0.0532836488382156_5.67379789372198_0.303180003474881-2 chr19 56601427 56601927 + 0.303180003474881 NA Intergenic Intergenic 53416 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak2_60_51_-0.0532836488382156_5.67379789372198_0.303180003474881 chr2 31974479 31974926 + 0.303180003474881 NA intron (NM_172268, intron 1 of 35) CpG 252 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_60_51_-0.0532836488382156_5.67379789372198_0.303180003474881-3 chr2 31974486 31974916 + 0.303180003474881 NA intron (NM_172268, intron 1 of 35) CpG 251 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_60_51_-0.0532836488382156_5.67379789372198_0.303180003474881 chr11 84870337 84870709 + 0.303180003474881 NA promoter-TSS (NR_131197) promoter-TSS (NR_131197) 215 NM_153144 217039 Mm.356653 NM_153144 ENSMUSG00000020530 Ggnbp2 AI451896|C75939|D330017P12Rik|DIF-3|Zfp403 gametogenetin binding protein 2 protein-coding common_peak2_60_51_-0.0532836488382156_5.67379789372198_0.303180003474881-2 chr2 180236006 180236778 + 0.303180003474881 NA Intergenic Intergenic -10533 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_60_51_-0.0532836488382156_5.67379789372198_0.303180003474881-3 chr8 39009917 39010512 + 0.303180003474881 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 4369 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak2_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-5 chr7 27195870 27196137 + 0.303180003474857 NA promoter-TSS (NM_001046637) promoter-TSS (NM_001046637) 222 NM_001243888 414069 Mm.379069 NM_001243888 ENSMUSG00000078786 BC024978 - cDNA sequence BC024978 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-3 chr18 38801620 38802268 + 0.303180003474857 NA Intergenic Intergenic -90512 NM_001033789 545253 Mm.244585 NM_001033789 ENSMUSG00000036452 Gm5820 EG545253 predicted gene 5820 protein-coding common_peak2_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857 chr12 8922567 8923365 + 0.303180003474857 NA intron (NM_008640, intron 1 of 6) intron (NM_008640, intron 1 of 6) 1659 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-4 chr18 76930066 76930846 + 0.303180003474857 NA intron (NM_025409, intron 1 of 2) intron (NM_025409, intron 1 of 2) 429 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding common_peak2_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-2 chr2 102763863 102764729 + 0.303180003474857 NA intron (NM_001077514, intron 8 of 10) intron (NM_001077514, intron 8 of 10) -17536 NR_153853 102637542 Mm.371582 NR_153852 Gm13872 - predicted gene 13872 ncRNA common_peak2_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-4 chr6 82755758 82756229 + 0.303180003474857 NA intron (NM_013820, intron 2 of 17) intron (NM_013820, intron 2 of 17) 18461 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-2 chr13 72197797 72198724 + 0.303180003474857 NA Intergenic Intergenic -234537 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-7 chr5 113540631 113541809 + 0.303180003474857 NA Intergenic Intergenic -9200 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-10 chr8 25068387 25068801 + 0.303180003474857 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -29632 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-8 chr7 27591713 27592423 + 0.303180003474857 NA intron (NM_001110208, intron 1 of 13) CpG 516 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-9 chr8 3630965 3631698 + 0.303180003474857 NA intron (NM_001357168, intron 1 of 18) intron (NM_001357168, intron 1 of 18) 222 NM_011503 20911 Mm.7247 NM_011503 ENSMUSG00000004626 Stxbp2 C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1 syntaxin binding protein 2 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857 chr1 183296430 183296925 + 0.303180003474857 NA promoter-TSS (NM_181732) promoter-TSS (NM_181732) -383 NM_181732 108909 Mm.290502 NM_145626 ENSMUSG00000042901 Aida 2610208M17Rik|BC004835 axin interactor, dorsalization associated protein-coding common_peak2_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-3 chr5 144965444 144965849 + 0.303180003474857 NA 5' UTR (NM_029438, exon 1 of 18) 5' UTR (NM_029438, exon 1 of 18) 184 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-5 chr3 8993577 8994135 + 0.303180003474857 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) 10348 NM_001357073 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_61_50_-0.00197580241871353_5.67143744076214_0.303180003474857-6 chr4 133603913 133604587 + 0.303180003474857 NA Intergenic Intergenic -2082 NM_018754 55948 Mm.44482 NM_018754 ENSMUSG00000047281 Sfn Er|Mme1|Ywhas stratifin protein-coding common_peak1_61_52_-0.0574709150104171_5.69918499705799_0.303138254425616 chr17 29660703 29661178 + 0.303138254425616 NA intron (NM_028791, intron 1 of 23) CpG 345 NM_028791 74157 Mm.390979 NM_028791 ENSMUSG00000024019 Cmtr1 1300018I05Rik|AI451264|Ftsjd2|MTr1 cap methyltransferase 1 protein-coding common_peak1_62_51_-0.00706941989425758_5.69690500819396_0.303138254425616-2 chr11 94403666 94404277 + 0.303138254425616 NA Intergenic Intergenic -10995 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak1_61_52_-0.0574709150104171_5.69918499705799_0.303138254425616-2 chr7 109959472 109960149 + 0.303138254425616 NA intron (NM_021494, intron 1 of 22) intron (NM_021494, intron 1 of 22) 612 NM_021494 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding common_peak2_61_52_-0.0574709150104171_5.69918499705799_0.303138254425616-2 chr10 120716758 120717256 + 0.303138254425616 NA Intergenic Intergenic -48725 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_62_51_-0.00706941989425758_5.69690500819396_0.303138254425616-3 chr9 119894928 119895402 + 0.303138254425616 NA intron (NM_026236, intron 1 of 18) CpG 270 NM_026236 67561 Mm.104789 NM_026236 ENSMUSG00000032512 Wdr48 8430408H12Rik|Uaf1|mKIAA1449 WD repeat domain 48 protein-coding common_peak1_62_51_-0.00706941989425758_5.69690500819396_0.303138254425616 chr1 183112941 183113603 + 0.303138254425616 NA intron (NM_001278218, intron 3 of 8) intron (NM_001278218, intron 3 of 8) 34285 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak2_61_52_-0.0574709150104171_5.69918499705799_0.303138254425616 chr1 164306722 164307536 + 0.303138254425616 NA promoter-TSS (NM_001293313) promoter-TSS (NM_001293313) 355 NM_001160209 66352 Mm.33285 NM_025505 ENSMUSG00000026577 Blzf1 1700030G05Rik|Blzf1l|Golgin-45|Jem-1 basic leucine zipper nuclear factor 1 protein-coding common_peak2_61_52_-0.0574709150104171_5.69918499705799_0.303138254425616-3 chr16 23984530 23985242 + 0.303138254425616 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) -3603 NM_001348026 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak2_62_51_-0.00706941989425758_5.69690500819396_0.303138254425616-2 chr18 60718135 60718990 + 0.303138254425616 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 9004 NM_001348103 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_62_51_-0.00706941989425758_5.69690500819396_0.303138254425616 chr11 72500985 72501535 + 0.303138254425616 NA intron (NM_029932, intron 9 of 11) B1_Mur1|SINE|Alu -11340 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak2_254_205_0.00971287198807769_7.69135696317726_0.303138229584269 chr11 96351961 96354758 + 0.303138229584269 NA promoter-TSS (NR_155303) promoter-TSS (NR_155303) 35 NR_155303 102632302 Mm.281153 NR_155303 Hoxb3os Gm11530|Hoxb3s homeobox B3 and homeobox B2, opposite strand ncRNA common_peak2_254_205_0.00971287198807769_7.69135696317726_0.303138229584269-2 chr6 82772154 82774408 + 0.303138229584269 NA intron (NM_013820, intron 1 of 17) CpG 1173 NM_013820 15277 Mm.255848 NM_013820 ENSMUSG00000000628 Hk2 AI642394|HKII hexokinase 2 protein-coding common_peak2_253_209_-0.0236608756654499_7.7024150798334_0.303117957947467 chr2 30708290 30709986 + 0.303117957947467 NA Intergenic Intergenic -12072 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-7 chr9 40801445 40802129 + 0.303098095889898 NA intron (NM_031165, intron 1 of 8) intron (NM_031165, intron 1 of 8) 514 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_64_52_0.0102196390725489_5.73303027409947_0.303098095889898 chr11 59383490 59384436 + 0.303098095889898 NA Intergenic Intergenic -8310 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-3 chr17 35837504 35838116 + 0.303098095889898 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 491 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-2 chr16 56036761 56037683 + 0.303098095889898 NA intron (NM_029092, intron 1 of 1) intron (NM_029092, intron 1 of 1) 552 NM_029092 52575 Mm.288742 NM_029092 ENSMUSG00000044763 Trmt10c 1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1 tRNA methyltransferase 10C protein-coding common_peak1_64_52_0.0102196390725489_5.73303027409947_0.303098095889898-4 chr2 84649825 84650591 + 0.303098095889898 NA promoter-TSS (NM_001355065) promoter-TSS (NM_001355065) 532 NM_001085449 12388 Mm.35738 NM_007615 ENSMUSG00000034101 Ctnnd1 AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384 catenin (cadherin associated protein), delta 1 protein-coding common_peak2_64_52_0.0102196390725489_5.73303027409947_0.303098095889898-2 chr15 10469722 10470473 + 0.303098095889898 NA intron (NM_030046, intron 1 of 11) CpG 419 NM_030046 78244 Mm.297862 NM_030046 ENSMUSG00000044224 Dnajc21 4930461P20Rik|9930116P15Rik DnaJ heat shock protein family (Hsp40) member C21 protein-coding common_peak1_64_52_0.0102196390725489_5.73303027409947_0.303098095889898-2 chr19 17256585 17256966 + 0.303098095889898 NA Intergenic Intergenic 82730 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898 chr11 31551655 31552437 + 0.303098095889898 NA Intergenic RLTR51B_Mm|LTR|ERVK? 119816 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_64_52_0.0102196390725489_5.73303027409947_0.303098095889898 chr18 36735078 36735674 + 0.303098095889898 NA intron (NM_028036, intron 1 of 11) CpG 306 NM_028036 71983 Mm.135188 NM_028036 ENSMUSG00000006850 Tmco6 2410015B03Rik transmembrane and coiled-coil domains 6 protein-coding common_peak2_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-2 chr15 31224435 31224798 + 0.303098095889898 NA intron (NM_146057, intron 1 of 3) CpG 231 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898 chr11 49051815 49052775 + 0.303098095889898 NA Intergenic Intergenic -1053 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-3 chr8 95487736 95488354 + 0.303098095889898 NA intron (NM_009974, intron 1 of 11) intron (NM_009974, intron 1 of 11) 775 NM_009974 13000 Mm.51136 NM_009974 ENSMUSG00000046707 Csnk2a2 1110035J23Rik|C77789|CK2 casein kinase 2, alpha prime polypeptide protein-coding common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-6 chr8 39009861 39010512 + 0.303098095889898 NA intron (NM_001357305, intron 1 of 8) intron (NM_001357305, intron 1 of 8) 4341 NM_001357306 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak1_64_52_0.0102196390725489_5.73303027409947_0.303098095889898-5 chr5 107987272 107988154 + 0.303098095889898 NA promoter-TSS (NM_026062) promoter-TSS (NM_026062) -636 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_64_52_0.0102196390725489_5.73303027409947_0.303098095889898-3 chr2 31068171 31068901 + 0.303098095889898 NA intron (NM_001355105, intron 6 of 15) intron (NM_001355105, intron 6 of 15) 27964 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-5 chr8 26502669 26503337 + 0.303098095889898 NA Intergenic Intergenic 321420 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak1_63_52_-0.0119903694918913_5.72192526981725_0.303098095889898-4 chr6 34600202 34600824 + 0.303098095889898 NA intron (NM_001347100, intron 1 of 13) intron (NM_001347100, intron 1 of 13) 2009 NM_001347100 109624 Mm.308134 NM_145575 ENSMUSG00000029761 Cald1 4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik caldesmon 1 protein-coding common_peak1_62_53_-0.0615172039166341_5.72412890020515_0.303098095889886-4 chr5 38259987 38260599 + 0.303098095889886 NA 5' UTR (NM_001356960, exon 1 of 5) 5' UTR (NM_001356960, exon 1 of 5) 108 NM_025480 66309 Mm.256185 NM_025480 ENSMUSG00000067365 Tmem128 2810021O14Rik transmembrane protein 128 protein-coding common_peak2_62_53_-0.0615172039166341_5.72412890020515_0.303098095889886 chr2 70508519 70509133 + 0.303098095889886 NA promoter-TSS (NM_025744) promoter-TSS (NM_025744) 7 NM_025744 66748 Mm.423014 NM_025744 ENSMUSG00000075302 Erich2 4933404M02Rik glutamate rich 2 protein-coding common_peak1_62_53_-0.0615172039166341_5.72412890020515_0.303098095889886 chr10 78714924 78716117 + 0.303098095889886 NA intron (NM_009809, intron 2 of 6) intron (NM_009809, intron 2 of 6) 2773 NM_009809 12365 Mm.20940 NM_009809 ENSMUSG00000005355 Casp14 MICE|mini-ICE caspase 14 protein-coding common_peak1_62_53_-0.0615172039166341_5.72412890020515_0.303098095889886-3 chr3 145649244 145649710 + 0.303098095889886 NA intron (NM_010516, intron 1 of 4) CpG 508 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_62_53_-0.0615172039166341_5.72412890020515_0.303098095889886-2 chr11 97804198 97804992 + 0.303098095889886 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 5030 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|LASP-1|MLN 50|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_62_53_-0.0615172039166341_5.72412890020515_0.303098095889886-2 chr5 139252647 139253560 + 0.303098095889886 NA promoter-TSS (NM_001163316) promoter-TSS (NM_001163316) -394 NM_001163316 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding common_peak1_257_212_-0.0217414469354402_7.72383889675812_0.303088271055916 chr5 125388730 125391676 + 0.303088271055916 NA promoter-TSS (NM_019639) promoter-TSS (NM_019639) -186 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-2 chr16 23984491 23985300 + 0.303059438674689 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) -3612 NM_001348026 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak2_63_54_-0.0654296284533524_5.74864489929798_0.303059438674689-2 chr5 64877310 64878091 + 0.303059438674689 NA Intergenic Intergenic 54999 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding common_peak1_64_54_-0.0432196198889123_5.7597499035802_0.303059438674689-2 chr18 35814979 35815571 + 0.303059438674689 NA Intergenic Intergenic -14513 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_64_54_-0.0432196198889123_5.7597499035802_0.303059438674689 chr10 77252121 77252662 + 0.303059438674689 NA Intergenic Intergenic 6832 NR_026944 100169878 Mm.420901 NR_026944 ENSMUSG00000078444 Gm10941 - predicted gene 10941 ncRNA common_peak2_64_54_-0.0432196198889123_5.7597499035802_0.303059438674689 chr11 84870347 84870749 + 0.303059438674689 NA promoter-TSS (NR_131197) promoter-TSS (NR_131197) 190 NM_153144 217039 Mm.356653 NM_153144 ENSMUSG00000020530 Ggnbp2 AI451896|C75939|D330017P12Rik|DIF-3|Zfp403 gametogenetin binding protein 2 protein-coding common_peak2_64_54_-0.0432196198889123_5.7597499035802_0.303059438674689-3 chr8 25068345 25068827 + 0.303059438674689 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -29624 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak2_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-3 chr17 25791780 25792809 + 0.303059438674689 NA promoter-TSS (NM_001285982) promoter-TSS (NM_001285982) 93 NM_001285982 214917 Mm.26783 NM_145410 ENSMUSG00000057411 Fam173a - family with sequence similarity 173, member A protein-coding common_peak2_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-2 chr16 85133849 85134409 + 0.303059438674689 NA intron (NM_001198825, intron 1 of 15) intron (NM_001198825, intron 1 of 15) 39578 NM_001198825 11820 Mm.277585 NM_007471 ENSMUSG00000022892 App Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp amyloid beta (A4) precursor protein protein-coding common_peak1_63_54_-0.0654296284533524_5.74864489929798_0.303059438674689 chr6 88935080 88935701 + 0.303059438674689 NA Intergenic Intergenic 33139 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-9 chr9 70284838 70285381 + 0.303059438674689 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 77759 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-4 chr18 80206914 80207565 + 0.303059438674689 NA exon (NM_178604, exon 2 of 4) exon (NM_178604, exon 2 of 4) 372 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-6 chr7 3704125 3704974 + 0.303059438674689 NA intron (NM_029767, intron 2 of 4) CpG-12606 508 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding common_peak2_64_54_-0.0432196198889123_5.7597499035802_0.303059438674689-2 chr15 66860678 66861531 + 0.303059438674689 NA Intergenic Intergenic -29275 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-4 chr19 16781279 16781833 + 0.303059438674689 NA promoter-TSS (NM_173028) promoter-TSS (NM_173028) -623 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689 chr11 113200844 113201802 + 0.303059438674689 NA non-coding (NR_015556, exon 1 of 3) non-coding (NR_015556, exon 1 of 3) 515 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-5 chr19 43917119 43917786 + 0.303059438674689 NA intron (NM_028029, intron 1 of 15) intron (NM_028029, intron 1 of 15) 22746 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-7 chr7 131560409 131561134 + 0.303059438674689 NA exon (NM_009774, exon 2 of 8) exon (NM_009774, exon 2 of 8) 277 NM_001317350 12237 Mm.927 NM_009774 ENSMUSG00000066979 Bub3 AU019800|AU021329|AU043350|AW146323|C78067 BUB3 mitotic checkpoint protein protein-coding common_peak2_65_53_0.00512350266104633_5.75744925349399_0.303059438674689 chr11 57091512 57092641 + 0.303059438674689 NA intron (NM_008165, intron 2 of 15) intron (NM_008165, intron 2 of 15) 79030 NM_001252403 14799 Mm.4920 NM_008165 ENSMUSG00000020524 Gria1 2900051M01Rik|Glr-1|Glr1|GluA1|GluR-A|GluRA|Glur-1|Glur1|HIPA1|gluR-K1 glutamate receptor, ionotropic, AMPA1 (alpha 1) protein-coding common_peak2_63_54_-0.0654296284533524_5.74864489929798_0.303059438674689 chr11 69365569 69366515 + 0.303059438674689 NA intron (NM_146019, intron 1 of 39) intron (NM_146019, intron 1 of 39) 3384 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak2_63_54_-0.0654296284533524_5.74864489929798_0.303059438674689-3 chr7 3704073 3704875 + 0.303059438674689 NA intron (NM_029767, intron 2 of 4) CpG-12606 433 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-8 chr8 122611682 122612306 + 0.303059438674689 NA promoter-TSS (NM_016722) promoter-TSS (NM_016722) 368 NM_021502 59005 Mm.38746 NM_021502 ENSMUSG00000015013 Trappc2l 1810017G16Rik|AB030200|Hspc176|Tca17 trafficking protein particle complex 2-like protein-coding common_peak1_65_53_0.00512350266104633_5.75744925349399_0.303059438674689-3 chr17 26604954 26605637 + 0.303059438674689 NA intron (NM_026170, intron 1 of 9) B1_Mur3|SINE|Alu 43783 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_64_54_-0.0432196198889123_5.7597499035802_0.303059438674689-3 chr6 31398844 31399423 + 0.303059438674689 NA promoter-TSS (NR_040300) promoter-TSS (NR_040300) 305 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding common_peak1_66_54_0.000193304115727599_5.78145636558252_0.303022200133692-4 chr7 120981138 120982329 + 0.303022200133692 NA promoter-TSS (NM_028955) promoter-TSS (NM_028955) 579 NM_007672 12585 Mm.1640 NM_007672 ENSMUSG00000030878 Cdr2 AA617262 cerebellar degeneration-related 2 protein-coding common_peak1_66_54_0.000193304115727599_5.78145636558252_0.303022200133692-3 chr4 62738246 62739218 + 0.303022200133692 NA Intergenic Intergenic 64758 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-4 chr19 29101368 29102032 + 0.303022200133692 NA intron (NM_021525, intron 1 of 8) CpG 325 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-6 chr7 5062251 5063146 + 0.303022200133692 NA intron (NM_001205231, intron 1 of 11) intron (NM_001205231, intron 1 of 11) 555 NM_001205231 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-7 chr8 69996735 69997114 + 0.303022200133692 NA promoter-TSS (NM_145596) promoter-TSS (NM_145596) -540 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-2 chr15 91703215 91704037 + 0.303022200133692 NA intron (NM_025730, intron 11 of 50) intron (NM_025730, intron 11 of 50) 30402 NM_025730 66725 Mm.37558 NM_025730 ENSMUSG00000036273 Lrrk2 4921513O20Rik|9330188B09Rik|AW561911|D630001M17Rik|Gm927|cI-46 leucine-rich repeat kinase 2 protein-coding common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-5 chr6 47788240 47789183 + 0.303022200133692 NA Intergenic Intergenic 14941 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692 chr10 34206595 34207467 + 0.303022200133692 NA intron (NM_172508, intron 1 of 5) CpG 520 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak1_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692 chr12 86831413 86832287 + 0.303022200133692 NA Intergenic L2a|LINE|L2 52964 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-2 chr17 84110347 84111012 + 0.303022200133692 NA Intergenic B1_Mus1|SINE|Alu 32019 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak1_66_54_0.000193304115727599_5.78145636558252_0.303022200133692-2 chr2 180235981 180236857 + 0.303022200133692 NA Intergenic Intergenic -10560 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding common_peak2_66_54_0.000193304115727599_5.78145636558252_0.303022200133692 chr18 63462632 63463429 + 0.303022200133692 NA Intergenic Intergenic -75847 NM_001039485 667742 Mm.158720 NM_172629 ENSMUSG00000041482 Piezo2 5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2 piezo-type mechanosensitive ion channel component 2 protein-coding common_peak1_66_54_0.000193304115727599_5.78145636558252_0.303022200133692 chr15 76715463 76716013 + 0.303022200133692 NA TTS (NM_145471) TTS (NM_145471) 5097 NM_001358893 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding common_peak1_66_54_0.000193304115727599_5.78145636558252_0.303022200133692-5 chr9 72701093 72702153 + 0.303022200133692 NA intron (NM_001357998, intron 1 of 23) B1_Mm|SINE|Alu 8325 NM_001357998 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|EG639396|Gm7265|KIAA0093|Nedd4-1|Nedd4a neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_65_55_-0.0473439172330892_5.78368296344106_0.303022200133692-3 chr17 15040923 15041457 + 0.303022200133692 NA promoter-TSS (NM_001039552) promoter-TSS (NM_001039552) -361 NM_001360402 381062 Mm.393767 NM_183133 ENSMUSG00000036552 Ermard 2210404J11Rik|2410011O22Rik|AI448938 ER membrane associated RNA degradation protein-coding common_peak2_267_220_-0.0204595008975321_7.77767280894267_0.303013082381237 chr15 103365104 103367329 + 0.303013082381237 NA intron (NM_001314041, intron 1 of 30) CpG 575 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak2_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564-5 chr6 52184239 52185162 + 0.302986303577564 NA intron (NM_010452, intron 2 of 4) intron (NM_010452, intron 2 of 4) 7003 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding common_peak2_67_55_-0.00457904429439626_5.80506539991041_0.302986303577564 chr12 82169565 82170355 + 0.302986303577564 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) -56 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564-2 chrX 6415825 6416987 + 0.302986303577564 NA intron (NM_001313764, intron 1 of 8) intron (NM_001313764, intron 1 of 8) 664 NM_001313764 208431 Mm.23208 NM_001040459 ENSMUSG00000068270 Shroom4 D430043L16Rik|Gm724|Shrm4 shroom family member 4 protein-coding common_peak2_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564-3 chr19 21653317 21653931 + 0.302986303577564 NA promoter-TSS (NM_025423) promoter-TSS (NM_025423) 315 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding common_peak2_67_55_-0.00457904429439626_5.80506539991041_0.302986303577564-5 chr9 56090007 56090821 + 0.302986303577564 NA exon (NM_011193, exon 1 of 15) exon (NM_011193, exon 1 of 15) 438 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_67_55_-0.00457904429439626_5.80506539991041_0.302986303577564-4 chr3 102995224 102995953 + 0.302986303577564 NA promoter-TSS (NM_025679) promoter-TSS (NM_025679) -152 NM_025679 66641 Mm.33937 NM_025679 ENSMUSG00000027854 Sike1 2810005O12Rik|5730470L24Rik|AI450236|AI839862|Sike|Sikeb suppressor of IKBKE 1 protein-coding common_peak1_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564 chr1 152817638 152818547 + 0.302986303577564 NA intron (NM_010877, intron 4 of 15) intron (NM_010877, intron 4 of 15) 17939 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak2_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564-6 chr8 64732817 64733493 + 0.302986303577564 NA intron (NM_025436, intron 1 of 5) intron (NM_025436, intron 1 of 5) 423 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding common_peak2_67_55_-0.00457904429439626_5.80506539991041_0.302986303577564-3 chr2 163602365 163602858 + 0.302986303577564 NA intron (NR_131225, intron 1 of 3) intron (NR_131225, intron 1 of 3) 297 NR_131225 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding common_peak2_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564-4 chr5 138155158 138155722 + 0.302986303577564 NA intron (NM_019747, intron 1 of 4) CpG 304 NM_019747 56314 Mm.19274 NM_019747 ENSMUSG00000037007 Zfp113 4732456B05Rik|mKIAA4229 zinc finger protein 113 protein-coding common_peak2_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564-2 chr15 77862253 77863002 + 0.302986303577564 NA Intergenic Intergenic -20452 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_67_55_-0.00457904429439626_5.80506539991041_0.302986303577564-2 chr17 56613459 56614008 + 0.302986303577564 NA TTS (NM_028782) TTS (NM_028782) 338 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding common_peak2_66_56_-0.0513369965243538_5.80722151590256_0.302986303577564 chr1 152817660 152818548 + 0.302986303577564 NA intron (NM_010877, intron 4 of 15) intron (NM_010877, intron 4 of 15) 17951 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-2 chr13 34398353 34398797 + 0.30295167774669 NA Intergenic Intergenic -53393 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-6 chr2 60901707 60902304 + 0.30295167774669 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) -20567 NM_001141931 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-4 chr19 9981892 9982380 + 0.30295167774669 NA promoter-TSS (NM_010239) promoter-TSS (NM_010239) -510 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669 chr1 64691169 64691849 + 0.30295167774669 NA promoter-TSS (NR_038009) promoter-TSS (NR_038009) 164 NM_001097644 227210 Mm.39706 NM_001097644 ENSMUSG00000070871 Ccnyl1 9630037P07Rik|AW554339 cyclin Y-like 1 protein-coding common_peak1_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-5 chr8 10910533 10911114 + 0.30295167774669 NA Intergenic Intergenic 10901 NR_102285 71624 Mm.139075 NR_102285 ENSMUSG00000109089 4833411C07Rik - RIKEN cDNA 4833411C07 gene ncRNA common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669 chr12 112808699 112809677 + 0.30295167774669 NA 5' UTR (NM_145450, exon 1 of 5) 5' UTR (NM_145450, exon 1 of 5) 213 NM_145450 217887 Mm.186678 NM_145450 ENSMUSG00000037594 BC022687 AW050009|C130001I08Rik|Clba1|Flj20080 cDNA sequence BC022687 protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-8 chr5 121660609 121661150 + 0.30295167774669 NA promoter-TSS (NM_001289544) promoter-TSS (NM_001289544) 10 NM_001289544 72399 Mm.153372 NM_028227 ENSMUSG00000029458 Brap 3010002G07Rik|BRAP2|IMP BRCA1 associated protein protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-5 chr16 92058354 92059555 + 0.30295167774669 NA intron (NM_080456, intron 1 of 2) CpG 618 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak1_69_56_0.0114109988078175_5.83859551356865_0.30295167774669 chr11 69979597 69980514 + 0.30295167774669 NA exon (NM_018740, exon 3 of 9) exon (NM_018740, exon 3 of 9) 275 NM_001253700 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak1_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-2 chr13 49186879 49187379 + 0.30295167774669 NA promoter-TSS (NM_013610) promoter-TSS (NM_013610) -418 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-4 chr16 15594019 15594681 + 0.30295167774669 NA intron (NM_001159351, intron 1 of 2) CpG 168 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak1_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-6 chr9 37656884 37657286 + 0.30295167774669 NA exon (NM_025289, exon 1 of 9) exon (NM_025289, exon 1 of 9) 227 NM_025289 21376 Mm.28689 NM_025289 ENSMUSG00000011114 Tbrg1 AA408552|AA409675|Niam|Tb-5|mFLJ00213 transforming growth factor beta regulated gene 1 protein-coding common_peak2_69_56_0.0114109988078175_5.83859551356865_0.30295167774669 chr8 90876532 90877095 + 0.30295167774669 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 47978 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-7 chr5 34660520 34661311 + 0.30295167774669 NA promoter-TSS (NM_029278) promoter-TSS (NM_029278) 536 NM_019497 14772 Mm.117076 NM_019497 ENSMUSG00000052783 Grk4 A830025H08Rik|GRK|Gprk2l|Gprk4 G protein-coupled receptor kinase 4 protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-3 chr13 38450672 38451323 + 0.30295167774669 NA intron (NM_007556, intron 1 of 6) (A)n|Simple_repeat|Simple_repeat 10796 NR_131033 75854 Mm.417810 NR_131033 ENSMUSG00000114895 4930579J19Rik - RIKEN cDNA 4930579J19 gene ncRNA common_peak1_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-3 chr17 15396242 15396803 + 0.30295167774669 NA non-coding (NR_033586, exon 1 of 11) non-coding (NR_033586, exon 1 of 11) 276 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding common_peak2_68_56_-0.00920111014103231_5.82828945909423_0.30295167774669-9 chr8 3515171 3515812 + 0.30295167774669 NA TTS (NM_053177) TTS (NM_053177) 107 NM_015801 50767 Mm.23085 NM_015801 ENSMUSG00000004565 Pnpla6 AI661849|MSws|Nte patatin-like phospholipase domain containing 6 protein-coding common_peak2_67_57_-0.0552051173643644_5.83037843644539_0.302951677746678-3 chr16 93603860 93604584 + 0.302951677746678 NA promoter-TSS (NM_145482) promoter-TSS (NM_145482) -407 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding common_peak2_67_57_-0.0552051173643644_5.83037843644539_0.302951677746678-5 chr6 122308932 122309818 + 0.302951677746678 NA intron (NM_010749, intron 1 of 6) intron (NM_010749, intron 1 of 6) 655 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak2_67_57_-0.0552051173643644_5.83037843644539_0.302951677746678-4 chr17 87312664 87313707 + 0.302951677746678 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 30299 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_67_57_-0.0552051173643644_5.83037843644539_0.302951677746678 chr12 70968344 70968986 + 0.302951677746678 NA Intergenic CpG -5958 NM_001310595 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_67_57_-0.0552051173643644_5.83037843644539_0.302951677746678-2 chr16 35363004 35363807 + 0.302951677746678 NA intron (NM_133704, intron 1 of 6) intron (NM_133704, intron 1 of 6) 513 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak2_279_230_-0.0215579875899854_7.84097004762106_0.302926484145116 chr10 27983503 27986630 + 0.302926484145116 NA Intergenic Intergenic -89754 NM_001359355 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak2_68_58_-0.0589541453381326_5.85316597669278_0.302918256338863-2 chr8 70131353 70132021 + 0.302918256338863 NA 3' UTR (NM_011266, exon 9 of 9) 3' UTR (NM_011266, exon 9 of 9) 360 NM_001025587 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding common_peak2_68_58_-0.0589541453381326_5.85316597669278_0.302918256338863-3 chr9 21073110 21073926 + 0.302918256338863 NA promoter-TSS (NM_001039824) promoter-TSS (NM_001039824) -4 NM_001039824 68165 Mm.490294 NM_001039824 ENSMUSG00000079677 Fdx1l B230118G17Rik|Fdx2 ferredoxin 1-like protein-coding common_peak2_68_58_-0.0589541453381326_5.85316597669278_0.302918256338863 chr2 31688286 31689074 + 0.302918256338863 NA promoter-TSS (NR_153862) promoter-TSS (NR_153862) 143 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863-3 chr5 136987099 136987774 + 0.302918256338863 NA promoter-TSS (NM_001310747) promoter-TSS (NM_001310747) 417 NM_011962 26433 Mm.251003 NM_011962 ENSMUSG00000004846 Plod3 AI414586|LH3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 protein-coding common_peak1_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863-2 chr12 35532520 35533530 + 0.302918256338863 NA intron (NM_001314027, intron 1 of 9) intron (NM_001314027, intron 1 of 9) 1964 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding common_peak1_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863-5 chr3 84319830 84320538 + 0.302918256338863 NA Intergenic Intergenic -15409 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863-3 chr13 91460210 91460767 + 0.302918256338863 NA promoter-TSS (NM_024186) promoter-TSS (NM_024186) -609 NM_024272 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak2_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863 chr10 97094198 97095268 + 0.302918256338863 NA Intergenic Intergenic 58965 NR_045358 75301 Mm.108650 NR_045358 ENSMUSG00000111924 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863-2 chr14 79586846 79587592 + 0.302918256338863 NA promoter-TSS (NM_026474) promoter-TSS (NM_026474) -441 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak1_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863 chr1 5082873 5083684 + 0.302918256338863 NA 5' UTR (NM_001310442, exon 1 of 13) 5' UTR (NM_001310442, exon 1 of 13) 192 NM_001310442 108664 Mm.27082 NM_133826 ENSMUSG00000033793 Atp6v1h 0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13 ATPase, H+ transporting, lysosomal V1 subunit H protein-coding common_peak1_69_58_-0.0383420363892828_5.8634720311672_0.302918256338863-4 chr2 130449880 130450753 + 0.302918256338863 NA promoter-TSS (NM_001163688) promoter-TSS (NM_001163688) 38 NM_001355161 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak1_70_57_0.00663974657915922_5.86130086841715_0.30291825633885 chr3 95667420 95668077 + 0.30291825633885 NA Intergenic Intergenic 9027 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_70_57_0.00663974657915922_5.86130086841715_0.30291825633885-2 chr5 134183970 134184543 + 0.30291825633885 NA 5' UTR (NM_053266, exon 1 of 16) 5' UTR (NM_053266, exon 1 of 16) 218 NM_053266 114674 Mm.218744 NM_053266 ENSMUSG00000015942 Gtf2ird2 1700012P16Rik GTF2I repeat domain containing 2 protein-coding common_peak2_70_57_0.00663974657915922_5.86130086841715_0.30291825633885 chr5 32197085 32197779 + 0.30291825633885 NA Intergenic Intergenic -35276 NM_030072 665270 Mm.160067 NM_030072 ENSMUSG00000029134 Plb1 4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606 phospholipase B1 protein-coding common_peak2_71_58_0.00201321973761903_5.88364965923065_0.302885977585745-3 chr5 122422183 122423025 + 0.302885977585745 NA exon (NM_019805, exon 1 of 11) exon (NM_019805, exon 1 of 11) 160 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding common_peak1_71_58_0.00201321973761903_5.88364965923065_0.302885977585745-2 chr8 107095766 107096360 + 0.302885977585745 NA promoter-TSS (NR_106043) promoter-TSS (NR_106043) 43 NR_106043 102465652 NR_106043 ENSMUSG00000098671 Mir7075 Gm27821|mmu-mir-7075 microRNA 7075 ncRNA common_peak2_71_58_0.00201321973761903_5.88364965923065_0.302885977585745-2 chr19 37965555 37966482 + 0.302885977585745 NA intron (NM_001302140, intron 19 of 53) intron (NM_001302140, intron 19 of 53) 77559 NM_001099634 226101 Mm.34674 NM_177035 ENSMUSG00000048612 Myof 2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3 myoferlin protein-coding common_peak2_71_58_0.00201321973761903_5.88364965923065_0.302885977585745 chr13 96542736 96543482 + 0.302885977585745 NA promoter-TSS (NM_012048) promoter-TSS (NM_012048) 374 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak1_71_58_0.00201321973761903_5.88364965923065_0.302885977585745 chr19 40401765 40402481 + 0.302885977585745 NA intron (NM_001034962, intron 2 of 22) intron (NM_001034962, intron 2 of 22) 187 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_70_59_-0.0422698539017876_5.88575566865762_0.302885977585733-4 chr3 105959573 105960147 + 0.302885977585733 NA intron (NM_027432, intron 1 of 9) intron (NM_027432, intron 1 of 9) 362 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak2_70_59_-0.0422698539017876_5.88575566865762_0.302885977585733 chr1 125435028 125435489 + 0.302885977585733 NA intron (NM_001205386, intron 2 of 12) CpG 469 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_70_59_-0.0422698539017876_5.88575566865762_0.302885977585733 chr13 97240383 97240921 + 0.302885977585733 NA promoter-TSS (NM_007930) promoter-TSS (NM_007930) -453 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak1_70_59_-0.0422698539017876_5.88575566865762_0.302885977585733-2 chr2 85036881 85037738 + 0.302885977585733 NA promoter-TSS (NM_001136081) promoter-TSS (NM_001136081) -142 NM_001136081 20833 Mm.219793 NM_182990 ENSMUSG00000027067 Ssrp1 C81323|Hmg1-rs1|Hmgi-rs3|Hmgox|T160 structure specific recognition protein 1 protein-coding common_peak1_70_59_-0.0422698539017876_5.88575566865762_0.302885977585733-3 chr2 155381664 155382151 + 0.302885977585733 NA promoter-TSS (NM_178111) promoter-TSS (NM_178111) 51 NM_178111 68728 Mm.293605 NM_178111 ENSMUSG00000038375 Trp53inp2 1110029F20Rik|Tp53inp2 transformation related protein 53 inducible nuclear protein 2 protein-coding common_peak2_70_59_-0.0422698539017876_5.88575566865762_0.302885977585733-2 chr12 69681001 69681675 + 0.302885977585733 NA intron (NM_001135559, intron 1 of 22) CpG 514 NM_001135559 20663 Mm.3770 NM_001135559 ENSMUSG00000034801 Sos2 SOS-2|mSOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding common_peak1_288_237_-0.0193060519993251_7.88516473730828_0.302870232026406 chr8 25070278 25072504 + 0.302870232026406 NA intron (NM_031257, intron 3 of 11) (GGAA)n|Simple_repeat|Simple_repeat 30420 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_71_60_-0.0460810684634261_5.90769680333117_0.302854783871718-2 chr17 70989957 70990914 + 0.302854783871718 NA promoter-TSS (NM_023402) promoter-TSS (NM_023402) 81 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_71_60_-0.0460810684634261_5.90769680333117_0.302854783871718-3 chr6 90735829 90736731 + 0.302854783871718 NA intron (NM_001356440, intron 1 of 13) CpG -19751 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_71_60_-0.0460810684634261_5.90769680333117_0.302854783871718-2 chr11 97418499 97419517 + 0.302854783871718 NA Intergenic Intergenic -31152 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak2_71_60_-0.0460810684634261_5.90769680333117_0.302854783871718 chr15 72809449 72810258 + 0.302854783871718 NA non-coding (NR_002864, exon 1 of 1) non-coding (NR_002864, exon 1 of 1) 471 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak1_71_60_-0.0460810684634261_5.90769680333117_0.302854783871718 chr11 82032231 82033032 + 0.302854783871718 NA Intergenic Intergenic -2946 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_71_60_-0.0460810684634261_5.90769680333117_0.302854783871718-3 chr15 55071625 55072145 + 0.302854783871718 NA exon (NM_001081288, exon 1 of 26) exon (NM_001081288, exon 1 of 26) 267 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693-6 chr7 27978693 27979441 + 0.302854783871693 NA promoter-TSS (NM_001081021) promoter-TSS (NM_001081021) 90 NM_001081021 338354 Mm.389873 NM_001081021 ENSMUSG00000063047 Zfp780b B230208L21Rik zinc finger protein 780B protein-coding common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693-3 chr2 48814165 48815019 + 0.302854783871693 NA 5' UTR (NM_007396, exon 1 of 11) 5' UTR (NM_007396, exon 1 of 11) 483 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693-7 chr8 105881003 105881555 + 0.302854783871693 NA TTS (NM_001357229) TTS (NM_001357229) 398 NM_181594 234699 Mm.28979 NM_181594 ENSMUSG00000036270 Edc4 BC022641 enhancer of mRNA decapping 4 protein-coding common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693-4 chr3 89773614 89774421 + 0.302854783871693 NA promoter-TSS (NR_130957) promoter-TSS (NR_130957) 408 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding common_peak1_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693 chr15 5538778 5539577 + 0.302854783871693 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 42859 NR_045274 71432 Mm.291087 NR_045274 ENSMUSG00000110018 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693 chr11 3963822 3964464 + 0.302854783871693 NA intron (NM_022889, intron 1 of 14) intron (NM_022889, intron 1 of 14) 168 NM_022889 64934 Mm.28659 NM_022889 ENSMUSG00000020430 Pes1 - pescadillo ribosomal biogenesis factor 1 protein-coding common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693-5 chr6 146890433 146891283 + 0.302854783871693 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 2364 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_72_59_-0.00247516004259207_5.90565301558722_0.302854783871693-2 chr13 23368742 23369379 + 0.302854783871693 NA 5' UTR (NM_001286155, exon 1 of 5) 5' UTR (NM_001286155, exon 1 of 5) 148 NM_001286156 218100 Mm.286454 NM_172586 ENSMUSG00000046351 Zfp322a Znf322|Znf322a zinc finger protein 322A protein-coding common_peak1_296_239_0.00773663409766012_7.91075891265735_0.302839561241286 chr4 43394803 43397249 + 0.302839561241286 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -10476 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak2_72_61_-0.0497808748209483_5.9293058729764_0.302824621390623-3 chr15 10485450 10485897 + 0.302824621390623 NA promoter-TSS (NM_011232) promoter-TSS (NM_011232) 264 NM_026396 67832 Mm.28057 NM_026396 ENSMUSG00000022247 Brix1 1110064N10Rik|Bxdc2|C76935 BRX1, biogenesis of ribosomes protein-coding common_peak1_72_61_-0.0497808748209483_5.9293058729764_0.302824621390623 chr16 8862177 8863135 + 0.302824621390623 NA Intergenic Intergenic 32556 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_73_60_-0.00683157607868878_5.92732154952354_0.302824621390623-2 chr18 60890678 60891380 + 0.302824621390623 NA Intergenic Intergenic -21211 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak1_72_61_-0.0497808748209483_5.9293058729764_0.302824621390623-2 chr8 124066005 124067036 + 0.302824621390623 NA Intergenic Intergenic 43047 NM_001029876 382038 Mm.334891 NM_001029876 ENSMUSG00000031976 Urb2 C77575|mKIAA0133 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) protein-coding common_peak2_72_61_-0.0497808748209483_5.9293058729764_0.302824621390623-2 chr1 135659960 135660721 + 0.302824621390623 NA Intergenic Intergenic -59723 NM_001360782 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_72_61_-0.0497808748209483_5.9293058729764_0.302824621390623-4 chr8 83607075 83607944 + 0.302824621390623 NA promoter-TSS (NM_018808) promoter-TSS (NM_018808) -666 NM_018808 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak2_72_61_-0.0497808748209483_5.9293058729764_0.302824621390623 chr1 86472180 86473299 + 0.302824621390623 NA Intergenic PB1D7|SINE|Alu 46410 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak1_73_60_-0.00683157607868878_5.92732154952354_0.302824621390623 chr8 124231551 124232227 + 0.302824621390623 NA intron (NM_139272, intron 1 of 15) CpG 495 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_73_60_-0.00683157607868878_5.92732154952354_0.302824621390623 chr17 56608573 56609663 + 0.302824621390623 NA intron (NM_153152, intron 1 of 3) B1_Mus1|SINE|Alu 653 NM_153152 224904 Mm.34002 NM_153152 ENSMUSG00000049760 2410015M20Rik Mic13|QIL1|sr104 RIKEN cDNA 2410015M20 gene protein-coding common_peak2_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288-5 chr3 54480596 54481070 + 0.302795439836288 NA Intergenic Intergenic 119726 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak1_75_61_0.00791216458502753_5.95815239267939_0.302795439836288 chr1 86472022 86473186 + 0.302795439836288 NA Intergenic Intergenic 46275 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak2_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288-3 chr17 79745610 79746579 + 0.302795439836288 NA Intergenic Intergenic -31053 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding common_peak2_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288 chr1 153486928 153487614 + 0.302795439836288 NA intron (NM_007842, intron 1 of 27) CpG 389 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding common_peak2_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288-4 chr2 27328343 27329782 + 0.302795439836288 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -81759 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak1_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288 chr10 17012956 17014032 + 0.302795439836288 NA intron (NR_038020, intron 1 of 8) RLTR17B_Mm|LTR|ERVK 82288 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA common_peak1_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288-2 chr17 65772058 65772905 + 0.302795439836288 NA intron (NM_133685, intron 1 of 6) CpG 271 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak2_74_61_-0.0110618460071121_5.94866538738332_0.302795439836288-2 chr12 110738077 110738563 + 0.302795439836288 NA intron (NM_001347428, intron 1 of 2) CpG 388 NM_001347428 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_73_62_-0.0533741620157189_5.95059284249206_0.302795439836264-3 chr4 152325926 152326744 + 0.302795439836264 NA intron (NR_102291, intron 1 of 4) intron (NR_102291, intron 1 of 4) 609 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding common_peak2_73_62_-0.0533741620157189_5.95059284249206_0.302795439836264 chr1 58030161 58031007 + 0.302795439836264 NA intron (NM_009676, intron 1 of 34) intron (NM_009676, intron 1 of 34) 615 NM_009676 11761 Mm.26787 NM_009676 ENSMUSG00000063558 Aox1 AI196512|AI255253|Ao|Aox-1|Aox-2|Aox2|Moro|Ro aldehyde oxidase 1 protein-coding common_peak2_73_62_-0.0533741620157189_5.95059284249206_0.302795439836264-2 chr12 51693153 51694585 + 0.302795439836264 NA intron (NM_001329698, intron 1 of 5) intron (NM_001329698, intron 1 of 5) -1955 NM_052973 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding common_peak1_304_250_-0.018840545040506_7.96212328143052_0.302774154898416 chr1 178335847 178338643 + 0.302774154898416 NA exon (NM_016805, exon 1 of 14) exon (NM_016805, exon 1 of 14) 570 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak2_75_63_-0.0378915250280976_5.98105423748595_0.302767192121941 chr1 20997163 20997881 + 0.302767192121941 NA Intergenic Intergenic 45896 NM_027974 71877 Mm.29178 NM_027974 ENSMUSG00000041809 Efhc1 1700029F22Rik|mRib72-1|myoclonin1 EF-hand domain (C-terminal) containing 1 protein-coding common_peak1_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941-2 chr2 30470960 30471989 + 0.302767192121941 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 2725 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_75_63_-0.0378915250280976_5.98105423748595_0.302767192121941-2 chr2 27318997 27319843 + 0.302767192121941 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -72117 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak1_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941-3 chr4 155623845 155624568 + 0.302767192121941 NA promoter-TSS (NM_001347308) promoter-TSS (NM_001347308) 549 NR_040441 100502734 Mm.306018 NR_040441 ENSMUSG00000086682 Gm16023 - predicted gene 16023 ncRNA common_peak2_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941-3 chr8 94306951 94307952 + 0.302767192121941 NA intron (NM_001357268, intron 14 of 20) intron (NM_001357268, intron 14 of 20) -16860 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak1_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941-4 chr9 69397783 69398479 + 0.302767192121941 NA intron (NM_145618, intron 1 of 15) CpG 133 NM_145618 93697 Mm.35911 NM_145618 ENSMUSG00000032235 Ice2 B230343B06Rik|Narg2 interactor of little elongation complex ELL subunit 2 protein-coding common_peak1_75_63_-0.0378915250280976_5.98105423748595_0.302767192121941 chr19 28181890 28182364 + 0.302767192121941 NA Intergenic Intergenic -170961 NM_001166414 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941 chr1 151062570 151063498 + 0.302767192121941 NA Intergenic Intergenic -69599 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak2_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941 chr10 21994042 21994516 + 0.302767192121941 NA promoter-TSS (NM_011361) promoter-TSS (NM_011361) -387 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_75_63_-0.0378915250280976_5.98105423748595_0.302767192121941-2 chr19 31082988 31083537 + 0.302767192121941 NA exon (NM_031249, exon 1 of 1) exon (NM_031249, exon 1 of 1) 421 NM_031249 83410 Mm.22031 NM_031249 ENSMUSG00000053536 Cstf2t 64kDa|C77975|tCstF-64|tauCstF-64 cleavage stimulation factor, 3' pre-RNA subunit 2, tau protein-coding common_peak2_75_63_-0.0378915250280976_5.98105423748595_0.302767192121941-3 chr9 21803537 21804268 + 0.302767192121941 NA intron (NM_177030, intron 43 of 49) intron (NM_177030, intron 43 of 49) -5356 NM_145611 235041 Mm.257371 NM_145611 ENSMUSG00000032194 Kank2 AI504612|Ankrd25|BC010245 KN motif and ankyrin repeat domains 2 protein-coding common_peak2_74_63_-0.0568655356202372_5.97156723218988_0.302767192121941-2 chr4 56864416 56865158 + 0.302767192121941 NA intron (NM_018761, intron 1 of 18) CpG 424 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding common_peak1_76_62_0.00355452867127237_5.97905718783555_0.302767192121929 chr1 130740596 130741748 + 0.302767192121929 NA exon (NM_177604, exon 3 of 4) exon (NM_177604, exon 3 of 4) 9196 NM_177604 212439 Mm.268547 NM_177604 ENSMUSG00000042510 AA986860 E030025M07|Sarg expressed sequence AA986860 protein-coding common_peak1_76_62_0.00355452867127237_5.97905718783555_0.302767192121929-2 chr3 54480558 54481106 + 0.302767192121929 NA Intergenic Intergenic 119725 NM_015784 50706 Mm.236067 NM_015784 ENSMUSG00000027750 Postn A630052E07Rik|AI747096|OSF-2|Osf2|PLF|PN periostin, osteoblast specific factor protein-coding common_peak2_701_564_0.00477298511519564_9.14449354986015_0.302757959819936 chr19 59458948 59464361 + 0.302757959819936 NA intron (NM_010132, intron 1 of 2) intron (NM_010132, intron 1 of 2) 2964 NM_010132 13797 Mm.245394 NM_010132 ENSMUSG00000043969 Emx2 Pdo empty spiracles homeobox 2 protein-coding common_peak1_312_252_0.00679932112216086_7.98639323525539_0.302746579113567 chr8 94300474 94303053 + 0.302746579113567 NA intron (NM_001357268, intron 7 of 20) intron (NM_001357268, intron 7 of 20) -22548 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak1_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522-2 chr5 76140121 76141238 + 0.302739834127522 NA intron (NM_020611, intron 1 of 5) intron (NM_020611, intron 1 of 5) 406 NM_020611 57357 Mm.289446 NM_020611 ENSMUSG00000029233 Srd5a3 1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l steroid 5 alpha-reductase 3 protein-coding common_peak2_76_64_-0.0415333608572652_6.00160113259982_0.302739834127522 chr19 8802502 8803427 + 0.302739834127522 NA intron (NM_001098237, intron 1 of 1) intron (NM_001098237, intron 1 of 1) 434 NM_001098237 75291 Mm.23423 NM_133759 ENSMUSG00000071661 Zbtb3 4930563M09Rik zinc finger and BTB domain containing 3 protein-coding common_peak2_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522-2 chr16 31593654 31594087 + 0.302739834127522 NA Intergenic Intergenic -24263 NM_001357871 224098 Mm.125439 NM_001357870 Gm536 Gm1777 predicted gene 536 protein-coding common_peak2_76_64_-0.0415333608572652_6.00160113259982_0.302739834127522-2 chr7 45465967 45466804 + 0.302739834127522 NA intron (NM_007527, intron 1 of 5) intron (NM_007527, intron 1 of 5) 513 NM_007527 12028 Mm.19904 NM_007527 ENSMUSG00000003873 Bax - BCL2-associated X protein protein-coding common_peak2_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522 chr15 102247386 102247932 + 0.302739834127522 NA intron (NM_011244, intron 3 of 9) CpG -1159 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak2_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522-3 chr2 153741252 153742170 + 0.302739834127522 NA intron (NM_007896, intron 1 of 6) intron (NM_007896, intron 1 of 6) 424 NM_007896 13589 Mm.143877 NM_007896 ENSMUSG00000027479 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 protein-coding common_peak2_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522-5 chr9 96630736 96631483 + 0.302739834127522 NA intron (NM_053268, intron 1 of 23) CpG 394 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding common_peak1_76_64_-0.0415333608572652_6.00160113259982_0.302739834127522-2 chr2 84714491 84715146 + 0.302739834127522 NA intron (NM_144887, intron 1 of 11) CpG 346 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak1_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522-3 chr6 142365900 142366884 + 0.302739834127522 NA intron (NM_001355511, intron 11 of 14) intron (NM_001355511, intron 11 of 14) 20550 NM_001355511 19691 Mm.27407 NM_023042 ENSMUSG00000030243 Recql RecQ1 RecQ protein-like protein-coding common_peak2_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522-4 chr6 52177502 52178404 + 0.302739834127522 NA intron (NM_010452, intron 3 of 4) intron (NM_010452, intron 3 of 4) 5072 NR_152256 100504154 Mm.440491 NR_152256 ENSMUSG00000087626 Gm15050 - predicted gene 15050 ncRNA common_peak1_76_64_-0.0415333608572652_6.00160113259982_0.302739834127522 chr17 35089299 35090123 + 0.302739834127522 NA intron (NM_178592, intron 1 of 19) CpG 420 NM_178592 193742 Mm.43745 NM_178592 ENSMUSG00000007036 Abhd16a AI326074|Bat-5|Bat5|D17H6S82E|NG26 abhydrolase domain containing 16A protein-coding common_peak1_77_63_-0.000681202890675969_5.99965939855466_0.302739834127522 chr2 153741250 153742176 + 0.302739834127522 NA intron (NM_007896, intron 1 of 6) intron (NM_007896, intron 1 of 6) 426 NM_007896 13589 Mm.143877 NM_007896 ENSMUSG00000027479 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 protein-coding common_peak1_78_64_-0.00480014675317797_6.01996773965187_0.302713324468805 chr3 107795690 107796575 + 0.302713324468805 NA Intergenic Intergenic -35663 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak1_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805 chr2 27319002 27319885 + 0.302713324468805 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -72140 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805-4 chr8 13529918 13530919 + 0.302713324468805 NA Intergenic Intergenic 32043 NM_025601 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak2_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805-3 chr5 24405370 24406124 + 0.302713324468805 NA intron (NM_029020, intron 9 of 15) intron (NM_029020, intron 9 of 15) -7704 NM_183000 171209 Mm.299636 NM_183000 ENSMUSG00000038276 Asic3 AW742291|Accn3|DRASIC|SLNAC1|TNAC1 acid-sensing (proton-gated) ion channel 3 protein-coding common_peak1_78_64_-0.00480014675317797_6.01996773965187_0.302713324468805-2 chr7 113186324 113187412 + 0.302713324468805 NA Intergenic Intergenic -20597 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805-2 chr3 145758716 145759683 + 0.302713324468805 NA intron (NM_026993, intron 1 of 5) CpG 507 NM_026993 69219 Mm.234247 NM_026993 ENSMUSG00000028194 Ddah1 2410006N07Rik|2510015N06Rik|AI987801|AW050362 dimethylarginine dimethylaminohydrolase 1 protein-coding common_peak1_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805-3 chr4 143211926 143212925 + 0.302713324468805 NA intron (NM_001256380, intron 1 of 7) CpG 284 NM_001081355 110593 Mm.332020 NM_001081355 ENSMUSG00000057637 Prdm2 4833427P12Rik|E330024L24Rik|Gm1033|Gm19732|KMT8|Riz|Riz1|Znfpr1c1 PR domain containing 2, with ZNF domain protein-coding common_peak2_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805 chr13 99383593 99384959 + 0.302713324468805 NA intron (NM_173757, intron 4 of 10) ID2|SINE|ID 28550 NR_015515 320893 Mm.470842 NR_015515 6430562O15Rik - RIKEN cDNA 6430562O15 gene ncRNA common_peak1_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805-2 chr2 91054153 91054792 + 0.302713324468805 NA intron (NM_008948, intron 1 of 11) intron (NM_008948, intron 1 of 11) 456 NM_008948 19182 Mm.289832 NM_008948 ENSMUSG00000002102 Psmc3 TBP-1 proteasome (prosome, macropain) 26S subunit, ATPase 3 protein-coding common_peak2_78_64_-0.00480014675317797_6.01996773965187_0.302713324468805 chr14 117930967 117931754 + 0.302713324468805 NA intron (NM_001079844, intron 7 of 9) intron (NM_001079844, intron 7 of 9) 22487 NR_105747 102465148 NR_105747 ENSMUSG00000098648 Mir6239 Gm28025|mmu-mir-6239 microRNA 6239 ncRNA common_peak2_78_64_-0.00480014675317797_6.01996773965187_0.302713324468805-2 chr15 57975361 57976618 + 0.302713324468805 NA Intergenic tRNA-Met_|tRNA|tRNA -9914 NM_173862 239463 Mm.221241 NM_173862 ENSMUSG00000051225 Fam83a - family with sequence similarity 83, member A protein-coding common_peak2_78_64_-0.00480014675317797_6.01996773965187_0.302713324468805-3 chr8 12755717 12756570 + 0.302713324468805 NA promoter-TSS (NM_001293667) promoter-TSS (NM_001293667) -873 NM_015804 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak2_77_65_-0.0450753222491294_6.02185645823389_0.302713324468805-5 chr8 105269404 105270328 + 0.302713324468805 NA promoter-TSS (NM_001256044) promoter-TSS (NM_001256044) 65 NM_001256044 26386 Mm.89204 NM_011939 ENSMUSG00000033249 Hsf4 HSF 4|HSTF 4|HSTF4|ldis1|mHSF4 heat shock transcription factor 4 protein-coding common_peak1_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356-2 chr13 66904755 66905728 + 0.302687624289356 NA promoter-TSS (NM_001177750) promoter-TSS (NM_001177750) 109 NM_026219 67530 Mm.379136 NM_026219 ENSMUSG00000021520 Uqcrb 2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding common_peak2_78_66_-0.0485215241824957_6.04182842836652_0.302687624289356 chr1 40275602 40276259 + 0.302687624289356 NA intron (NM_001123382, intron 1 of 10) intron (NM_001123382, intron 1 of 10) 9344 NM_001123382 16177 Mm.896 NM_008362 ENSMUSG00000026072 Il1r1 CD121a|CD121b|IL-1R1|IL-iR|Il1r-1 interleukin 1 receptor, type I protein-coding common_peak2_78_66_-0.0485215241824957_6.04182842836652_0.302687624289356-2 chr1 58795379 58796334 + 0.302687624289356 NA intron (NM_009812, intron 1 of 8) intron (NM_009812, intron 1 of 8) 482 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_80_65_0.00898833376916031_6.04888828624303_0.302687624289356-3 chr7 84150843 84152036 + 0.302687624289356 NA exon (NM_133722, exon 1 of 3) exon (NM_133722, exon 1 of 3) 454 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak1_80_65_0.00898833376916031_6.04888828624303_0.302687624289356 chr16 27388665 27389876 + 0.302687624289356 NA intron (NM_001025615, intron 1 of 9) intron (NM_001025615, intron 1 of 9) 314 NM_001289436 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding common_peak1_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356 chr12 8500263 8501110 + 0.302687624289356 NA promoter-TSS (NM_007483) promoter-TSS (NM_007483) -677 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak1_78_66_-0.0485215241824957_6.04182842836652_0.302687624289356 chr11 107012135 107012779 + 0.302687624289356 NA Intergenic Intergenic -12932 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak2_80_65_0.00898833376916031_6.04888828624303_0.302687624289356 chr11 4593990 4594792 + 0.302687624289356 NA intron (NM_028860, intron 1 of 17) CpG 424 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak2_80_65_0.00898833376916031_6.04888828624303_0.302687624289356-2 chr9 62980092 62980811 + 0.302687624289356 NA intron (NM_019663, intron 1 of 13) CpG 428 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak1_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356-5 chr7 141901633 141902416 + 0.302687624289356 NA intron (NM_001347562, intron 1 of 6) intron (NM_001347562, intron 1 of 6) 437 NM_023764 54473 Mm.103551 NM_023764 ENSMUSG00000025139 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein protein-coding common_peak1_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356-6 chr9 89210661 89211411 + 0.302687624289356 NA promoter-TSS (NM_026829) promoter-TSS (NM_026829) -154 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak2_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356 chr17 65772105 65773081 + 0.302687624289356 NA 5' UTR (NM_133685, exon 1 of 7) 5' UTR (NM_133685, exon 1 of 7) 159 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak2_78_66_-0.0485215241824957_6.04182842836652_0.302687624289356-3 chr6 122339147 122340555 + 0.302687624289356 NA promoter-TSS (NR_073364) promoter-TSS (NR_073364) -194 NR_073364 13619 Mm.6822 NM_007905 ENSMUSG00000040669 Phc1 AW557034|Edr|Edr1|Mph1|Rae-28|rae28 polyhomeotic 1 protein-coding common_peak1_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356-3 chr15 75922835 75923281 + 0.302687624289356 NA Intergenic Intergenic -1498 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik|Pycr3 pyrroline-5-carboxylate reductase-like protein-coding common_peak2_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356-2 chr5 151109340 151110387 + 0.302687624289356 NA intron (NR_153382, intron 1 of 13) intron (NR_153382, intron 1 of 13) 80330 NM_001163493 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak1_80_65_0.00898833376916031_6.04888828624303_0.302687624289356-2 chr2 112367466 112368521 + 0.302687624289356 NA promoter-TSS (NM_026519) promoter-TSS (NM_026519) 34 NM_026519 68032 Mm.220942 NM_026519 ENSMUSG00000027131 Emc4 2610318K02Rik|Tmem85 ER membrane protein complex subunit 4 protein-coding common_peak1_79_65_-0.00880713553326729_6.03999055159182_0.302687624289356-4 chr2 4541459 4542485 + 0.302687624289356 NA intron (NM_001177843, intron 11 of 23) intron (NM_001177843, intron 11 of 23) -17782 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_79_67_-0.051875857425153_6.06152491253776_0.302662697069732-4 chr5 142821869 142822298 + 0.302662697069732 NA Intergenic Intergenic -4696 NM_001122730 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak1_80_67_-0.0340803881227254_6.07042264718898_0.302662697069732-2 chr2 143915661 143916898 + 0.302662697069732 NA intron (NM_019771, intron 1 of 3) intron (NM_019771, intron 1 of 3) 948 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak1_81_66_0.00487037714266592_6.06852437902911_0.302662697069732 chr8 64732678 64733610 + 0.302662697069732 NA intron (NM_025436, intron 1 of 5) intron (NM_025436, intron 1 of 5) 434 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding common_peak2_79_67_-0.051875857425153_6.06152491253776_0.302662697069732 chr1 43146621 43147471 + 0.302662697069732 NA intron (NM_010212, intron 2 of 5) intron (NM_010212, intron 2 of 5) 16915 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_79_67_-0.051875857425153_6.06152491253776_0.302662697069732-2 chr11 83753431 83754317 + 0.302662697069732 NA exon (NM_145432, exon 1 of 20) exon (NM_145432, exon 1 of 20) 237 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding common_peak1_79_67_-0.051875857425153_6.06152491253776_0.302662697069732 chr13 60895950 60897427 + 0.302662697069732 NA exon (NM_001145801, exon 2 of 4) exon (NM_001145801, exon 2 of 4) 759 NM_007797 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding common_peak1_80_67_-0.0340803881227254_6.07042264718898_0.302662697069732-3 chr9 102763083 102763659 + 0.302662697069732 NA Intergenic Intergenic 23723 NR_033301 434510 Mm.387937 NM_001034892 ENSMUSG00000093812 Gm5627 EG434510 predicted gene 5627 ncRNA common_peak2_79_67_-0.051875857425153_6.06152491253776_0.302662697069732-3 chr4 143294269 143295032 + 0.302662697069732 NA intron (NM_010329, intron 1 of 5) intron (NM_010329, intron 1 of 5) 4914 NM_010329 14726 Mm.2976 NM_010329 ENSMUSG00000028583 Pdpn E11|Gp38|OTS-8|RANDAM-2|T1-alpha|T1a|T1alpha podoplanin protein-coding common_peak1_80_67_-0.0340803881227254_6.07042264718898_0.302662697069732 chr1 182026506 182027118 + 0.302662697069732 NA Intergenic Intergenic -6832 NM_001083120 13800 Mm.87759 NM_008680 ENSMUSG00000022995 Enah Mena|NDPP-1|Ndpp1|WBP8 ENAH actin regulator protein-coding common_peak1_81_68_-0.0375648891777312_6.0897420121893_0.302638508455059 chr10 80148756 80149357 + 0.302638508455059 NA promoter-TSS (NM_001305799) promoter-TSS (NM_001305799) -626 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_82_67_0.000860779640579068_6.08789323107063_0.302638508455059-2 chr3 63963768 63964574 + 0.302638508455059 NA exon (NM_015728, exon 1 of 6) exon (NM_015728, exon 1 of 6) 562 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak1_82_67_0.000860779640579068_6.08789323107063_0.302638508455059 chr18 4635079 4635979 + 0.302638508455059 NA intron (NM_001081963, intron 1 of 3) CpG 600 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak2_81_68_-0.0375648891777312_6.0897420121893_0.302638508455059-3 chr8 46429471 46430486 + 0.302638508455059 NA Intergenic Intergenic -41059 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_81_68_-0.0375648891777312_6.0897420121893_0.302638508455059 chr18 44827986 44829302 + 0.302638508455059 NA promoter-TSS (NM_001163013) promoter-TSS (NM_001163013) -21 NM_001163013 240255 Mm.244482 NM_001163013 ENSMUSG00000034653 Ythdc2 3010002F02Rik|BC037178 YTH domain containing 2 protein-coding common_peak1_82_67_0.000860779640579068_6.08789323107063_0.302638508455059-3 chr7 132851786 132852782 + 0.302638508455059 NA intron (NM_028095, intron 1 of 5) intron (NM_028095, intron 1 of 5) 363 NM_028095 72096 Mm.28631 NM_028095 ENSMUSG00000030960 Eef1akmt2 2010208K18Rik|Mettl10 EEF1A lysine methyltransferase 2 protein-coding common_peak2_81_68_-0.0375648891777312_6.0897420121893_0.302638508455059-2 chr2 94406189 94407313 + 0.302638508455059 NA promoter-TSS (NM_001355691) promoter-TSS (NM_001355691) 44 NR_027831 66457 Mm.402557 NR_027831 2810002D19Rik - RIKEN cDNA 2810002D19 gene ncRNA common_peak1_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-2 chr13 12460672 12461443 + 0.302615026096394 NA intron (NM_001291057, intron 1 of 8) intron (NM_001291057, intron 1 of 8) 681 NM_001291060 56048 Mm.474138 NM_018886 ENSMUSG00000057554 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 protein-coding common_peak1_82_69_-0.0409593960540482_6.10880331891794_0.302615026096394-2 chr11 103094809 103095692 + 0.302615026096394 NA intron (NM_152813, intron 1 of 14) intron (NM_152813, intron 1 of 14) 6408 NM_152813 72469 Mm.264743 NM_152813 ENSMUSG00000020937 Plcd3 2610205J15Rik|mKIAA1964 phospholipase C, delta 3 protein-coding common_peak1_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-3 chr14 26969489 26970443 + 0.302615026096394 NA intron (NM_145221, intron 1 of 21) CpG 585 NM_145221 72993 Mm.202322 NM_145221 ENSMUSG00000040760 Appl1 2900057D21Rik|7330406P05Rik|AI585782|AW209077|BB022931|C88264|DIP13 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 protein-coding common_peak2_82_69_-0.0409593960540482_6.10880331891794_0.302615026096394-4 chr6 86438297 86439378 + 0.302615026096394 NA 5' UTR (NM_001243741, exon 1 of 10) 5' UTR (NM_001243741, exon 1 of 10) 191 NM_001243741 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding common_peak2_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394 chr11 74829705 74830828 + 0.302615026096394 NA promoter-TSS (NM_010813) promoter-TSS (NM_010813) -658 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-4 chr16 20651386 20652506 + 0.302615026096394 NA intron (NM_134101, intron 1 of 20) CpG 294 NM_134101 21762 Mm.243234 NM_134101 ENSMUSG00000006998 Psmd2 9430095H01Rik|AA407121|TEG-190|Tex190 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding common_peak2_82_69_-0.0409593960540482_6.10880331891794_0.302615026096394-2 chr16 38562868 38563678 + 0.302615026096394 NA intron (NM_026407, intron 1 of 8) intron (NM_026407, intron 1 of 8) 459 NM_026407 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak2_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-2 chr19 42170617 42171189 + 0.302615026096394 NA intron (NM_177319, intron 1 of 12) CpG 336 NM_001164531 319740 Mm.287359 NM_177319 ENSMUSG00000018820 Zfyve27 2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681 zinc finger, FYVE domain containing 27 protein-coding common_peak1_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-5 chr16 24489525 24490878 + 0.302615026096394 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -39113 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_82_69_-0.0409593960540482_6.10880331891794_0.302615026096394 chr10 128083280 128084472 + 0.302615026096394 NA intron (NM_016774, intron 1 of 9) CpG 569 NM_016774 11947 Mm.238973 NM_016774 ENSMUSG00000025393 Atp5b Atp5f1b ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit protein-coding common_peak2_82_69_-0.0409593960540482_6.10880331891794_0.302615026096394 chr10 111164142 111165511 + 0.302615026096394 NA promoter-TSS (NM_175489) promoter-TSS (NM_175489) 24 NM_175489 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding common_peak2_82_69_-0.0409593960540482_6.10880331891794_0.302615026096394-3 chr19 8871569 8872186 + 0.302615026096394 NA exon (NM_001362044, exon 2 of 9) exon (NM_001362044, exon 2 of 9) 329 NM_001362044 225896 Mm.27839 NM_146093 ENSMUSG00000071655 Ubxn1 2B28|4930455J02Rik|D19Ertd721e|T25529|mY33K UBX domain protein 1 protein-coding common_peak1_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394 chr10 61680305 61681034 + 0.302615026096394 NA promoter-TSS (NR_126477) promoter-TSS (NR_126477) -379 NR_126477 75539 NR_126477 1700022H01Rik - RIKEN cDNA 1700022H01 gene ncRNA common_peak2_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-3 chr5 122353918 122355109 + 0.302615026096394 NA promoter-TSS (NM_144912) promoter-TSS (NM_144912) 185 NR_152872 56433 Mm.216528 NM_019780 ENSMUSG00000029462 Vps29 2010015D08Rik|AW049835|PEP11 VPS29 retromer complex component protein-coding common_peak1_83_68_-0.00304474033203306_6.10700208661215_0.302615026096394-6 chr7 45153852 45154582 + 0.302615026096394 NA promoter-TSS (NM_001278207) promoter-TSS (NM_001278207) -86 NM_029406 68845 Mm.181689 NM_029406 ENSMUSG00000003423 Pih1d1 1110061L23Rik|4933413A04Rik|Nop17 PIH1 domain containing 1 protein-coding common_peak2_335_275_-0.0171546994785228_8.09994710703891_0.302615015539993 chr16 55530987 55533995 + 0.302615015539993 NA Intergenic Intergenic 37760 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_85_69_0.00990453369122246_6.13423528379058_0.302592219506763-2 chr15 93594502 93595726 + 0.302592219506763 NA intron (NM_001033217, intron 1 of 7) intron (NM_001033217, intron 1 of 7) 777 NM_001033217 106042 Mm.150314 NM_001033217 ENSMUSG00000036158 Prickle1 1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1 prickle planar cell polarity protein 1 protein-coding common_peak1_85_69_0.00990453369122246_6.13423528379058_0.302592219506763 chr1 153091161 153092382 + 0.302592219506763 NA intron (NM_175460, intron 7 of 10) intron (NM_175460, intron 7 of 10) 94676 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak1_85_69_0.00990453369122246_6.13423528379058_0.302592219506763-3 chr3 63976254 63977158 + 0.302592219506763 NA intron (NM_001033300, intron 1 of 15) intron (NM_001033300, intron 1 of 15) 563 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding common_peak2_83_70_-0.0442674030585462_6.12761341797541_0.302592219506763 chr7 73536964 73537774 + 0.302592219506763 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 4377 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_86_70_0.00600150410003852_6.1527478715547_0.302570059929088 chr16 16303023 16304037 + 0.302570059929088 NA non-coding (NR_038046, exon 1 of 5) non-coding (NR_038046, exon 1 of 5) 565 NM_198246 70120 Mm.37486 NM_198246 ENSMUSG00000022792 Yars2 2210023C10Rik|tyrRS tyrosyl-tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_85_71_-0.0307374508061233_6.15455627603925_0.302570059929088-2 chr3 9750999 9751886 + 0.302570059929088 NA intron (NM_053182, intron 2 of 7) intron (NM_053182, intron 2 of 7) 82237 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak1_84_71_-0.0474922249252261_6.1461788889797_0.302570059929088 chr6 72439754 72440492 + 0.302570059929088 NA promoter-TSS (NM_145569) promoter-TSS (NM_145569) -565 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak2_86_70_0.00600150410003852_6.1527478715547_0.302570059929088-3 chr5 31526309 31527358 + 0.302570059929088 NA promoter-TSS (NM_009206) promoter-TSS (NM_009206) -71 NM_028150 72195 Mm.164187 NM_028150 ENSMUSG00000053134 Supt7l 2610524B01Rik|6030455L14Rik suppressor of Ty 7-like protein-coding common_peak1_86_70_0.00600150410003852_6.1527478715547_0.302570059929088 chr4 121214227 121215060 + 0.302570059929088 NA intron (NM_001346660, intron 1 of 7) CpG 441 NM_001346660 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak1_85_71_-0.0307374508061233_6.15455627603925_0.302570059929088 chr10 111473300 111474156 + 0.302570059929088 NA intron (NR_152558, intron 1 of 14) CpG 501 NR_152558 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding common_peak2_86_70_0.00600150410003852_6.1527478715547_0.302570059929088-2 chr19 16923800 16924801 + 0.302570059929088 NA Intergenic Intergenic -31818 NM_181348 353211 Mm.257354 NM_181348 ENSMUSG00000039126 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367 prune homolog 2 protein-coding common_peak2_84_71_-0.0474922249252261_6.1461788889797_0.302570059929088-2 chr9 74952523 74953629 + 0.302570059929088 NA promoter-TSS (NM_001113283) promoter-TSS (NM_001113283) 23 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_84_71_-0.0474922249252261_6.1461788889797_0.302570059929088 chr12 110087009 110087845 + 0.302570059929088 NA Intergenic Intergenic 70646 NR_045466 67280 Mm.390495 NR_045466 ENSMUSG00000113331 3110009F21Rik - RIKEN cDNA 3110009F21 gene ncRNA common_peak1_85_71_-0.0307374508061233_6.15455627603925_0.302570059929088-3 chr5 5514004 5514827 + 0.302570059929088 NA intron (NM_001193660, intron 1 of 4) CpG 374 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding common_peak2_87_71_0.00219542158150343_6.17102271223306_0.302548520215158 chr7 84409486 84410547 + 0.302548520215158 NA promoter-TSS (NM_007488) promoter-TSS (NM_007488) 22 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak1_87_71_0.00219542158150343_6.17102271223306_0.302548520215158 chr17 25918573 25919651 + 0.302548520215158 NA intron (NM_139154, intron 2 of 6) intron (NM_139154, intron 2 of 6) 602 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak1_86_72_-0.0340759352752968_6.17278659124237_0.302548520215158 chr2 117460704 117461935 + 0.302548520215158 NA Intergenic Intergenic -118442 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding common_peak1_86_72_-0.0340759352752968_6.17278659124237_0.302548520215158-2 chr8 34107714 34108437 + 0.302548520215158 NA promoter-TSS (NM_001293758) promoter-TSS (NM_001293758) -261 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_87_71_0.00219542158150343_6.17102271223306_0.302548520215158-2 chr8 70712453 70713238 + 0.302548520215158 NA Intergenic Intergenic -5698 NM_001195253 100502950 Mm.52981 NM_001195253 ENSMUSG00000095026 Gm3336 100041434|2410018E23Rik predicted gene 3336 protein-coding common_peak1_87_73_-0.0373329426051345_6.19078689432638_0.302527574714518 chr18 67244816 67245855 + 0.302527574714518 NA intron (NM_172630, intron 1 of 10) CpG 495 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 Pgap5 metallophosphoesterase 1 protein-coding common_peak1_87_73_-0.0373329426051345_6.19078689432638_0.302527574714518-2 chr4 122885351 122885861 + 0.302527574714518 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 470 NM_001358035 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_87_73_-0.0373329426051345_6.19078689432638_0.302527574714518-3 chr5 148632883 148633829 + 0.302527574714518 NA Intergenic Intergenic -80568 NM_001359199 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG|MUB|mmMUB ubiquitin-like 3 protein-coding common_peak2_88_72_-0.00151733248009034_6.18906589263997_0.302527574714518-4 chr9 102626322 102627194 + 0.302527574714518 NA promoter-TSS (NM_001301689) promoter-TSS (NM_001301689) 462 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_88_72_-0.00151733248009034_6.18906589263997_0.302527574714518 chr16 18876755 18877778 + 0.302527574714518 NA promoter-TSS (NM_010922) promoter-TSS (NM_010922) 516 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding common_peak1_88_72_-0.00151733248009034_6.18906589263997_0.302527574714518-2 chr17 5189134 5190245 + 0.302527574714518 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 194615 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_88_72_-0.00151733248009034_6.18906589263997_0.302527574714518-2 chr15 61242079 61243362 + 0.302527574714518 NA Intergenic RLTR17B_Mm|LTR|ERVK -321450 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak2_88_72_-0.00151733248009034_6.18906589263997_0.302527574714518 chr10 79854711 79855308 + 0.302527574714518 NA promoter-TSS (NR_029447) promoter-TSS (NR_029447) -38 NR_029447 414101 Mm.401339 NR_029447 ENSMUSG00000091994 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA common_peak2_88_72_-0.00151733248009034_6.18906589263997_0.302527574714518-3 chr17 34959425 34959923 + 0.302527574714518 NA promoter-TSS (NM_010478) promoter-TSS (NM_010478) -436 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding common_peak2_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891 chr1 153091095 153092382 + 0.302507199172891 NA intron (NM_175460, intron 7 of 10) intron (NM_175460, intron 7 of 10) 94709 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak1_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891-2 chr17 75109539 75110388 + 0.302507199172891 NA intron (NM_019919, intron 3 of 33) URR1A|DNA|hAT-Charlie -68818 NM_001331236 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak2_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891-2 chr3 27651042 27651791 + 0.302507199172891 NA intron (NM_173182, intron 1 of 25) G-rich|Low_complexity|Low_complexity 59036 NM_001356953 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891-3 chr7 45123495 45124281 + 0.302507199172891 NA promoter-TSS (NR_000004) promoter-TSS (NR_000004) 501 NM_013725 27207 Mm.196538 NM_013725 ENSMUSG00000003429 Rps11 - ribosomal protein S11 protein-coding common_peak2_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891-3 chr5 124116016 124116827 + 0.302507199172891 NA TTS (NM_025671) TTS (NM_025671) 313 NM_144509 65105 Mm.29430 NM_144509 ENSMUSG00000029404 Arl6ip4 AA408210|AA408365|Aip-4|Srp25 ADP-ribosylation factor-like 6 interacting protein 4 protein-coding common_peak1_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891-5 chr6 108783123 108783838 + 0.302507199172891 NA intron (NM_026011, intron 1 of 6) CpG 421 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding common_peak1_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891 chr1 178733087 178734132 + 0.302507199172891 NA intron (NM_001161665, intron 4 of 14) intron (NM_001161665, intron 4 of 14) 204484 NM_001161665 269152 Mm.129727 NM_177724 ENSMUSG00000026494 Kif26b 4832420M10|BC056349|D230039L06Rik kinesin family member 26B protein-coding common_peak2_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891-4 chr8 84004188 84005365 + 0.302507199172891 NA promoter-TSS (NR_106191) promoter-TSS (NR_106191) -852 NR_106191 102466886 NR_106191 ENSMUSG00000098823 Mir8111 Gm27823|mmu-mir-8111 microRNA 8111 ncRNA common_peak2_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891-5 chr8 111747662 111748557 + 0.302507199172891 NA Intergenic Intergenic -4260 NM_009954 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak1_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891 chr15 7863307 7863829 + 0.302507199172891 NA Intergenic Intergenic 48018 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891-3 chr18 3382972 3383695 + 0.302507199172891 NA 5' UTR (NM_029402, exon 1 of 21) 5' UTR (NM_029402, exon 1 of 21) 108 NM_029402 71745 Mm.291707 NM_029402 ENSMUSG00000024231 Cul2 1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106 cullin 2 protein-coding common_peak2_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891 chr12 21416509 21417569 + 0.302507199172891 NA exon (NM_011739, exon 1 of 5) exon (NM_011739, exon 1 of 5) 397 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding common_peak1_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891-2 chr11 52396486 52397299 + 0.302507199172891 NA intron (NM_153117, intron 1 of 2) intron (NM_153117, intron 1 of 2) 464 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak2_89_73_-0.00514019777561092_6.20688326674114_0.302507199172891-2 chr17 84148359 84149963 + 0.302507199172891 NA Intergenic Intergenic 38786 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_88_74_-0.0405114640959532_6.2085629584479_0.302507199172891-4 chr4 62732491 62733496 + 0.302507199172891 NA Intergenic Intergenic 59019 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_363_293_0.00635994047314803_8.20285231507294_0.302507190627709 chr8 126594223 126596187 + 0.302507190627709 NA Intergenic Intergenic -1769 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_89_75_-0.043614345590246_6.22612034064846_0.302487370638123-2 chr4 87983062 87984258 + 0.302487370638123 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 49747 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak2_91_74_0.00697963172713045_6.23230850635945_0.302487370638123-4 chr4 11006924 11007591 + 0.302487370638123 NA intron (NM_175175, intron 1 of 1) CpG 362 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding common_peak1_90_74_-0.00867644603988182_6.22448046747594_0.302487370638123 chr12 111966044 111966941 + 0.302487370638123 NA intron (NM_027360, intron 1 of 3) intron (NM_027360, intron 1 of 3) 517 NM_027360 70257 Mm.318 NM_027360 ENSMUSG00000021290 2010107E04Rik 9430003J03Rik|AU043134|AV124504|Mp68 RIKEN cDNA 2010107E04 gene protein-coding common_peak2_89_75_-0.043614345590246_6.22612034064846_0.302487370638123-2 chr4 32799967 32800777 + 0.302487370638123 NA intron (NM_175364, intron 1 of 2) CpG 113 NM_175364 108755 Mm.1182 NM_175364 ENSMUSG00000045854 Lyrm2 2610208E05Rik LYR motif containing 2 protein-coding common_peak2_91_74_0.00697963172713045_6.23230850635945_0.302487370638123-3 chr16 18876725 18877786 + 0.302487370638123 NA promoter-TSS (NM_010922) promoter-TSS (NM_010922) 505 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|Tuple1 histone cell cycle regulator protein-coding common_peak1_90_74_-0.00867644603988182_6.22448046747594_0.302487370638123-2 chr15 61242065 61243378 + 0.302487370638123 NA Intergenic RLTR17B_Mm|LTR|ERVK -321451 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak2_91_74_0.00697963172713045_6.23230850635945_0.302487370638123 chr13 28543288 28544296 + 0.302487370638123 NA intron (NR_045053, intron 7 of 8) ID4|SINE|ID 167081 NR_105787 102466635 NR_105787 ENSMUSG00000099158 Mir6368 Gm27800|mmu-mir-6368 microRNA 6368 ncRNA common_peak2_90_74_-0.00867644603988182_6.22448046747594_0.302487370638123 chr12 108391166 108392424 + 0.302487370638123 NA intron (NM_001286346, intron 1 of 21) intron (NM_001286346, intron 1 of 21) -18838 NM_001043336 68519 Mm.236645 NM_001043335 ENSMUSG00000058070 Eml1 1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco echinoderm microtubule associated protein like 1 protein-coding common_peak2_91_74_0.00697963172713045_6.23230850635945_0.302487370638123-5 chr8 3393073 3393821 + 0.302487370638123 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 439 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak1_90_74_-0.00867644603988182_6.22448046747594_0.302487370638123-3 chr19 40512514 40513562 + 0.302487370638123 NA intron (NM_009166, intron 1 of 23) intron (NM_009166, intron 1 of 23) 698 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_89_75_-0.043614345590246_6.22612034064846_0.302487370638123 chr15 102247403 102248075 + 0.302487370638123 NA intron (NM_011244, intron 3 of 9) CpG -1239 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak2_89_75_-0.043614345590246_6.22612034064846_0.302487370638123 chr11 102880411 102881427 + 0.302487370638123 NA promoter-TSS (NM_011431) promoter-TSS (NM_011431) 56 NM_011431 20624 Mm.873 NM_011431 ENSMUSG00000020929 Eftud2 116kDa|Snrp116|U5-116kD elongation factor Tu GTP binding domain containing 2 protein-coding common_peak2_91_74_0.00697963172713045_6.23230850635945_0.302487370638123-2 chr15 82015564 82016579 + 0.302487370638123 NA promoter-TSS (NM_010247) promoter-TSS (NM_010247) 149 NM_134095 28075 Mm.474453 NM_134095 ENSMUSG00000022472 Desi1 AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2 desumoylating isopeptidase 1 protein-coding common_peak1_91_74_0.00697963172713045_6.23230850635945_0.302487370638123 chr15 51803920 51804736 + 0.302487370638123 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 61133 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_369_298_0.00545102689348376_8.22672718764485_0.302482488278018 chr17 71000795 71003425 + 0.302482488278018 NA 5' UTR (NM_026064, exon 1 of 4) 5' UTR (NM_026064, exon 1 of 4) 423 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak1_90_76_-0.0466442962389024_6.24346439257545_0.302468067374185-2 chr8 107424317 107425038 + 0.302468067374185 NA intron (NM_026277, intron 2 of 8) CpG 361 NM_026277 67619 Mm.36817 NM_026277 ENSMUSG00000003848 Nob1 1700021I09Rik|ART-4|Nob1p|Psmd8bp1 NIN1/RPN12 binding protein 1 homolog protein-coding common_peak1_90_76_-0.0466442962389024_6.24346439257545_0.302468067374185 chr15 86091222 86092237 + 0.302468067374185 NA intron (NM_172611, intron 2 of 18) intron (NM_172611, intron 2 of 18) 33002 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185-2 chr13 51963901 51964973 + 0.302468067374185 NA Intergenic Intergenic 117762 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_90_76_-0.0466442962389024_6.24346439257545_0.302468067374185 chr4 3775218 3776060 + 0.302468067374185 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 60016 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak2_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185-4 chr7 139389113 139389935 + 0.302468067374185 NA intron (NM_183144, intron 1 of 15) CpG 415 NM_001127363 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak2_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185-3 chr7 49094017 49094929 + 0.302468067374185 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 67685 NR_154465 108167511 Mm.400599 NR_154465 9130015G15Rik - RIKEN cDNA 9130015G15 gene ncRNA common_peak2_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185-2 chr6 88044621 88045221 + 0.302468067374185 NA promoter-TSS (NM_001293653) promoter-TSS (NM_001293653) 96 NM_001293653 19349 Mm.333233 NM_009005 ENSMUSG00000079477 Rab7 Rab7a RAB7, member RAS oncogene family protein-coding common_peak1_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185-3 chr7 135609983 135610657 + 0.302468067374185 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 4492 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185 chr13 23584988 23585964 + 0.302468067374185 NA TTS (NM_001290530) TTS (NM_001290530) 494 NM_001290530 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak2_91_76_-0.0309882184718901_6.25129243145896_0.302468067374185 chr5 137532833 137533575 + 0.302468067374185 NA 5' UTR (NM_010312, exon 1 of 10) 5' UTR (NM_010312, exon 1 of 10) 102 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak2_92_77_-0.0341170770820121_6.26834368032124_0.302449268781736 chr1 82724886 82725514 + 0.302449268781736 NA intron (NM_001310695, intron 1 of 7) intron (NM_001310695, intron 1 of 7) 310 NM_001310695 75734 Mm.396863 NM_029409 ENSMUSG00000026150 Mff 5230400G24Rik|AI314724 mitochondrial fission factor protein-coding common_peak1_92_77_-0.0341170770820121_6.26834368032124_0.302449268781736 chr7 120917790 120918582 + 0.302449268781736 NA intron (NM_001164096, intron 1 of 19) CpG 442 NM_001164096 26939 Mm.193632 NM_025298 ENSMUSG00000030880 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E protein-coding common_peak2_93_76_-0.000180216966090718_6.26669643221186_0.302449268781736 chr8 13159285 13160087 + 0.302449268781736 NA intron (NM_010684, intron 1 of 8) intron (NM_010684, intron 1 of 8) 525 NM_010684 16783 Mm.16716 NM_010684 ENSMUSG00000031447 Lamp1 CD107a|LGP-120|LGP-A|Lamp-1|P2B|Perk lysosomal-associated membrane protein 1 protein-coding common_peak2_92_77_-0.0341170770820121_6.26834368032124_0.302449268781736-4 chr6 72344598 72345523 + 0.302449268781736 NA exon (NM_138592, exon 1 of 13) exon (NM_138592, exon 1 of 13) 115 NM_138592 28035 Mm.281900 NM_138592 ENSMUSG00000056305 Usp39 AA408960|AI894154|CGI-21|D6Wsu157e|SAD1 ubiquitin specific peptidase 39 protein-coding common_peak2_92_77_-0.0341170770820121_6.26834368032124_0.302449268781736-3 chr4 40702436 40703694 + 0.302449268781736 NA promoter-TSS (NM_025545) promoter-TSS (NM_025545) 129 NM_001025444 66408 Mm.430710 NM_025545 ENSMUSG00000028411 Aptx 2410016G21Rik|AA388047|FHA-HIT aprataxin protein-coding common_peak2_92_77_-0.0341170770820121_6.26834368032124_0.302449268781736-2 chr12 31498849 31499843 + 0.302449268781736 NA intron (NM_001253847, intron 1 of 5) CpG 270 NM_134048 104836 Mm.273270 NM_134048 ENSMUSG00000020659 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 protein-coding common_peak2_94_77_-0.00363684513646767_6.28358379629401_0.302430955324439 chr14 25525807 25527212 + 0.302430955324439 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -7930 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_93_78_-0.0371744244482928_6.28519353595296_0.302430955324439 chr11 97434592 97435893 + 0.302430955324439 NA Intergenic Intergenic -14918 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_93_78_-0.0371744244482928_6.28519353595296_0.302430955324439-3 chr16 3883986 3885201 + 0.302430955324439 NA promoter-TSS (NM_029090) promoter-TSS (NM_029090) -26 NM_029090 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|HAT4|Nat15|NatF N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_93_78_-0.0371744244482928_6.28519353595296_0.302430955324439-2 chr15 77797145 77797917 + 0.302430955324439 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) -40521 NM_001357895 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak1_94_77_-0.00363684513646767_6.28358379629401_0.302430955324439 chr5 33935685 33936988 + 0.302430955324439 NA promoter-TSS (NM_011914) promoter-TSS (NM_011914) -78 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding common_peak2_384_310_0.00561062164797654_8.28357608095459_0.302426443349998 chr2 151914979 151918293 + 0.302426443349998 NA intron (NM_009641, intron 1 of 8) intron (NM_009641, intron 1 of 8) 5429 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_95_78_-0.00701506087834058_6.30027321773793_0.302413108461692 chr14 25492090 25493183 + 0.302413108461692 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 33451 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_95_78_-0.00701506087834058_6.30027321773793_0.302413108461692-2 chrX 94212118 94212951 + 0.302413108461692 NA intron (NM_012010, intron 1 of 11) intron (NM_012010, intron 1 of 11) 117 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak2_95_78_-0.00701506087834058_6.30027321773793_0.302413108461692-2 chr17 28952574 28953613 + 0.302413108461692 NA promoter-TSS (NM_025888) promoter-TSS (NM_025888) -123 NM_025888 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding common_peak2_95_78_-0.00701506087834058_6.30027321773793_0.302413108461692 chr15 37960274 37960939 + 0.302413108461692 NA 5' UTR (NM_001357022, exon 1 of 9) 5' UTR (NM_001357022, exon 1 of 9) 250 NM_001357023 382985 Mm.24738 NM_199476 ENSMUSG00000022292 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding common_peak2_96_78_0.00782980623397478_6.30769565129409_0.302413108461692 chr2 31442873 31443596 + 0.302413108461692 NA Intergenic Intergenic -27036 NM_007494 11898 Mm.3217 NM_007494 ENSMUSG00000076441 Ass1 AA408052|ASS|Ass-1|fold argininosuccinate synthetase 1 protein-coding common_peak2_96_78_0.00782980623397478_6.30769565129409_0.302413108461692-2 chr5 122501157 122502199 + 0.302413108461692 NA exon (NM_009722, exon 1 of 21) exon (NM_009722, exon 1 of 21) 547 NM_001110140 11938 Mm.227583 NM_009722 ENSMUSG00000029467 Atp2a2 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|Serca2a|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding common_peak2_95_78_-0.00701506087834058_6.30027321773793_0.302413108461692-3 chr8 64615724 64616576 + 0.302413108461692 NA intron (NM_013494, intron 3 of 8) PB1D10|SINE|Alu 76959 NM_013494 12876 Mm.31395 NM_013494 ENSMUSG00000037852 Cpe CPH|Cph-1|Cph1|NF-alpha1|R74677|fat carboxypeptidase E protein-coding common_peak2_96_80_-0.0282394484735464_6.32573027864785_0.302395710585543 chr1 179959233 179960572 + 0.302395710585543 NA promoter-TSS (NM_001346805) promoter-TSS (NM_001346805) -858 NM_001359541 226751 Mm.259655 NM_001033285 ENSMUSG00000026490 Cdc42bpa A930014J19Rik|DMPK-like CDC42 binding protein kinase alpha protein-coding common_peak1_96_80_-0.0282394484735464_6.32573027864785_0.302395710585543-4 chr8 73353784 73354901 + 0.302395710585543 NA promoter-TSS (NM_010687) promoter-TSS (NM_010687) -802 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_97_79_0.00437506890544803_6.32411562934009_0.302395710585543 chr14 34502859 34503396 + 0.302395710585543 NA promoter-TSS (NM_009758) promoter-TSS (NM_009758) -581 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5 bone morphogenetic protein receptor, type 1A protein-coding common_peak1_96_80_-0.0282394484735464_6.32573027864785_0.302395710585543 chr13 14062055 14063309 + 0.302395710585543 NA intron (NM_001331178, intron 1 of 4) intron (NM_001331178, intron 1 of 4) 806 NM_001331119 14593 Mm.148039 NM_010282 ENSMUSG00000021302 Ggps1 1810026C22Rik|9530089B04Rik|AI843169|C79210 geranylgeranyl diphosphate synthase 1 protein-coding common_peak1_96_80_-0.0282394484735464_6.32573027864785_0.302395710585543-2 chr19 27370334 27371350 + 0.302395710585543 NA Intergenic Intergenic 48223 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding common_peak1_95_80_-0.0430843155858618_6.31830784509169_0.302395710585543 chr5 31048390 31049224 + 0.302395710585543 NA promoter-TSS (NM_177870) promoter-TSS (NM_177870) 117 NM_001177622 330064 Mm.205463 NM_177870 ENSMUSG00000006641 Slc5a6 E430023I20 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 protein-coding common_peak1_96_80_-0.0282394484735464_6.32573027864785_0.302395710585543-3 chr7 126797811 126799078 + 0.302395710585543 NA intron (NM_001177307, intron 1 of 9) intron (NM_001177307, intron 1 of 9) 734 NM_001177307 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding common_peak2_95_80_-0.0430843155858618_6.31830784509169_0.302395710585543 chr19 40512506 40513694 + 0.302395710585543 NA intron (NM_009166, intron 1 of 23) intron (NM_009166, intron 1 of 23) 636 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_97_79_0.00437506890544803_6.32411562934009_0.302395710585543-3 chr8 72571350 72572320 + 0.302395710585543 NA promoter-TSS (NM_172396) promoter-TSS (NM_172396) 12 NM_001357279 74166 Mm.212927 NM_144534 ENSMUSG00000031791 Tmem38a 1110001E17Rik|AI413399|SPR-27|TRIC-A|mg33a transmembrane protein 38A protein-coding common_peak2_97_79_0.00437506890544803_6.32411562934009_0.302395710585543 chr11 6291561 6292464 + 0.302395710585543 NA promoter-TSS (NM_001361904) promoter-TSS (NM_001361904) -158 NM_001361904 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding common_peak2_97_79_0.00437506890544803_6.32411562934009_0.302395710585543-2 chr2 144527460 144528307 + 0.302395710585543 NA promoter-TSS (NM_001360362) promoter-TSS (NM_001360362) 138 NM_029763 70408 Mm.389351 NM_029763 ENSMUSG00000027427 Polr3f 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6 polymerase (RNA) III (DNA directed) polypeptide F protein-coding common_peak1_97_81_-0.0312488408252731_6.34192758420545_0.302378744963234-5 chr9 62121111 62122501 + 0.302378744963234 NA TTS (NR_039595) TTS (NR_039595) 788 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak1_97_81_-0.0312488408252731_6.34192758420545_0.302378744963234 chr13 29501576 29502685 + 0.302378744963234 NA intron (NR_131896, intron 11 of 16) intron (NR_131896, intron 11 of 16) 353543 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak2_98_80_0.000996604167344373_6.3403483049683_0.302378744963234 chr3 121617747 121618647 + 0.302378744963234 NA Intergenic Intergenic 25288 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak1_97_81_-0.0312488408252731_6.34192758420545_0.302378744963234-4 chr3 138060545 138061643 + 0.302378744963234 NA intron (NR_037975, intron 1 of 3) intron (NR_037975, intron 1 of 3) 6294 NR_037975 329763 Mm.169710 NM_177860 ENSMUSG00000049349 Gm5105 D830013H12|EG329763 predicted gene 5105 ncRNA common_peak1_97_81_-0.0312488408252731_6.34192758420545_0.302378744963234-3 chr3 121649310 121650299 + 0.302378744963234 NA Intergenic Intergenic -3351 NR_036458 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA common_peak2_98_80_0.000996604167344373_6.3403483049683_0.302378744963234-2 chr7 99321516 99322737 + 0.302378744963234 NA intron (NM_010837, intron 3 of 3) intron (NM_010837, intron 3 of 3) 31113 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_98_80_0.000996604167344373_6.3403483049683_0.302378744963234-3 chr8 33641732 33642393 + 0.302378744963234 NA promoter-TSS (NM_178648) promoter-TSS (NM_178648) -86 NM_178648 108159 Mm.29301 NM_178648 ENSMUSG00000052906 Ubxn8 D0H8S2298E|Rep-8|Rep8h|Ubxd6 UBX domain protein 8 protein-coding common_peak1_97_81_-0.0312488408252731_6.34192758420545_0.302378744963234-2 chr2 34825732 34826819 + 0.302378744963234 NA promoter-TSS (NM_013890) promoter-TSS (NM_013890) -40 NM_001164772 30050 Mm.4465 NM_013890 ENSMUSG00000035949 Fbxw2 2700071L08Rik|FBW2|Fwd2|MD6 F-box and WD-40 domain protein 2 protein-coding common_peak2_399_322_0.00574356873865156_8.33826213906325_0.302374562771661 chr8 46739969 46741977 + 0.302374562771661 NA intron (NR_152560, intron 1 of 7) CpG 1228 NR_152560 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_98_82_-0.0341928242949558_6.35794301919945_0.302362195683184-2 chr9 56417170 56417976 + 0.302362195683184 NA intron (NM_172924, intron 1 of 6) intron (NM_172924, intron 1 of 6) 477 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak2_98_82_-0.0341928242949558_6.35794301919945_0.302362195683184 chr13 51963828 51965022 + 0.302362195683184 NA Intergenic Intergenic 117750 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_101_82_0.00857204864373706_6.37932545566879_0.302346047605302 chr17 87105999 87107182 + 0.302346047605302 NA Intergenic Intergenic -1089 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak1_101_82_0.00857204864373706_6.37932545566879_0.302346047605302-2 chr19 43752565 43753437 + 0.302346047605302 NA promoter-TSS (NM_025530) promoter-TSS (NM_025530) -1 NM_144874 226139 Mm.248237 NM_144874 ENSMUSG00000040018 Cox15 2900026G05Rik cytochrome c oxidase assembly protein 15 protein-coding common_peak2_100_82_-0.00554153208951114_6.37226866530217_0.302346047605302 chr13 38527376 38528327 + 0.302346047605302 NA promoter-TSS (NM_001289599) promoter-TSS (NM_001289599) 63 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak2_100_82_-0.00554153208951114_6.37226866530217_0.302346047605302-2 chr3 95696122 95697406 + 0.302346047605302 NA Intergenic Intergenic -8847 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak2_101_82_0.00857204864373706_6.37932545566879_0.302346047605302 chr5 110652664 110653957 + 0.302346047605302 NA promoter-TSS (NM_027156) promoter-TSS (NM_027156) 72 NM_153570 100608 Mm.29960 NM_153570 ENSMUSG00000033294 Noc4l AI326906 NOC4 like protein-coding common_peak2_100_84_-0.0398930368802883_6.38944441769756_0.302330286314607 chr11 51755732 51756938 + 0.302330286314607 NA 5' UTR (NM_175255, exon 1 of 23) 5' UTR (NM_175255, exon 1 of 23) 499 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak1_101_84_-0.0257794561470401_6.39650120806418_0.302330286314607-2 chr10 41519144 41519898 + 0.302330286314607 NA promoter-TSS (NM_016898) promoter-TSS (NM_016898) 21 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak2_100_84_-0.0398930368802883_6.38944441769756_0.302330286314607-3 chr16 35983352 35984255 + 0.302330286314607 NA intron (NM_008465, intron 1 of 13) CpG 440 NM_008465 16646 Mm.3991 NM_008465 ENSMUSG00000022905 Kpna1 AW494490|IPOA5|NPI1|Rch2|mSRP1 karyopherin (importin) alpha 1 protein-coding common_peak1_102_83_0.0052699422794662_6.39495239391849_0.302330286314607 chr7 139389151 139390201 + 0.302330286314607 NA intron (NM_183144, intron 1 of 15) intron (NM_183144, intron 1 of 15) 567 NM_001127363 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak2_102_83_0.0052699422794662_6.39495239391849_0.302330286314607 chr8 70766137 70766783 + 0.302330286314607 NA intron (NM_023065, intron 1 of 7) intron (NM_023065, intron 1 of 7) 203 NM_023065 65972 Mm.30241 NM_023065 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak2_100_84_-0.0398930368802883_6.38944441769756_0.302330286314607-2 chr11 102318177 102319043 + 0.302330286314607 NA intron (NM_011551, intron 1 of 20) CpG-2669 486 NM_001302955 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_101_84_-0.0257794561470401_6.39650120806418_0.302330286314607-3 chr16 23450322 23451322 + 0.302330286314607 NA TTS (NM_008555) TTS (NM_008555) 21689 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak1_101_84_-0.0257794561470401_6.39650120806418_0.302330286314607 chr1 179040860 179041957 + 0.302330286314607 NA intron (NM_027188, intron 10 of 11) intron (NM_027188, intron 10 of 11) 476633 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak2_102_85_-0.028677389643871_6.41192605988016_0.302314898078895 chr7 34168010 34169008 + 0.302314898078895 NA promoter-TSS (NM_016682) promoter-TSS (NM_016682) 20 NM_016682 50995 Mm.27560 NM_016682 ENSMUSG00000052997 Uba2 AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b ubiquitin-like modifier activating enzyme 2 protein-coding common_peak1_102_85_-0.028677389643871_6.41192605988016_0.302314898078895-2 chr13 96670208 96670878 + 0.302314898078895 NA 5' UTR (NM_001360166, exon 1 of 20) 5' UTR (NM_001360166, exon 1 of 20) 393 NM_001360165 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak1_103_84_0.00203727917092245_6.41040957572316_0.302314898078895 chr11 51755965 51757183 + 0.302314898078895 NA 5' UTR (NM_175255, exon 1 of 23) 5' UTR (NM_175255, exon 1 of 23) 260 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak2_103_84_0.00203727917092245_6.41040957572316_0.302314898078895 chr8 79398749 79399418 + 0.302314898078895 NA intron (NM_008539, intron 1 of 6) CpG 385 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak1_102_85_-0.028677389643871_6.41192605988016_0.302314898078895 chr1 58662439 58663349 + 0.302314898078895 NA intron (NM_001347056, intron 10 of 13) intron (NM_001347056, intron 10 of 13) 10253 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak1_103_84_0.00203727917092245_6.41040957572316_0.302314898078895-2 chr8 70879536 70880583 + 0.302314898078895 NA Intergenic ID_B1|SINE|B4 -6569 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak1_103_86_-0.0315152805401038_6.42718585557868_0.302299869808136 chr3 94974739 94975336 + 0.302299869808136 NA 5' UTR (NM_001293716, exon 1 of 10) 5' UTR (NM_001293716, exon 1 of 10) 306 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase beta protein-coding common_peak2_103_86_-0.0315152805401038_6.42718585557868_0.302299869808136 chr19 44899010 44900176 + 0.302299869808136 NA Intergenic Intergenic -31526 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak1_105_86_-0.00422842015211167_6.44082928577267_0.302285189017724 chr4 134631848 134632900 + 0.302285189017724 NA intron (NM_207237, intron 2 of 11) intron (NM_207237, intron 2 of 11) -64523 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA common_peak1_104_87_-0.0342950034372826_6.44228411691866_0.302285189017724-2 chr3 122274373 122275270 + 0.302285189017724 NA intron (NM_153806, intron 1 of 6) intron (NM_153806, intron 1 of 6) 407 NM_153806 99480 Mm.398647 NM_153806 ENSMUSG00000039756 Dnttip2 4930588M11Rik|AA408582|AU014960|HSU15552 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding common_peak1_104_87_-0.0342950034372826_6.44228411691866_0.302285189017724-3 chr5 123748478 123749386 + 0.302285189017724 NA promoter-TSS (NM_001042421) promoter-TSS (NM_001042421) 482 NM_001005525 208606 Mm.276341 NM_025438 ENSMUSG00000029422 Rsrc2 1500011J06Rik arginine/serine-rich coiled-coil 2 protein-coding common_peak1_104_87_-0.0342950034372826_6.44228411691866_0.302285189017724 chr1 92180666 92181545 + 0.302285189017724 NA promoter-TSS (NM_207225) promoter-TSS (NM_207225) -764 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_107_87_0.00606025268961741_6.46246174498211_0.302270843793768 chr4 155601056 155602279 + 0.302270843793768 NA 5' UTR (NM_177186, exon 1 of 9) 5' UTR (NM_177186, exon 1 of 9) 251 NM_177186 320541 Mm.306018 NM_177186 ENSMUSG00000042202 Slc35e2 A530082C11Rik|AI957035 solute carrier family 35, member E2 protein-coding common_peak2_106_87_-0.00726558160813884_6.45579882783323_0.302270843793768 chr17 35049721 35050886 + 0.302270843793768 NA promoter-TSS (NM_033444) promoter-TSS (NM_033444) 60 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak1_106_87_-0.00726558160813884_6.45579882783323_0.302270843793768 chr10 23349291 23351011 + 0.302270843793768 NA promoter-TSS (NM_001347372) promoter-TSS (NM_001347372) -208 NM_010167 14051 Mm.332128 NM_010167 ENSMUSG00000010461 Eya4 B130023L16Rik EYA transcriptional coactivator and phosphatase 4 protein-coding common_peak1_106_87_-0.00726558160813884_6.45579882783323_0.302270843793768-2 chr19 32292887 32294063 + 0.302270843793768 NA intron (NM_144792, intron 2 of 9) intron (NM_144792, intron 2 of 9) 55841 NM_001168525 208449 Mm.329810 NM_144792 ENSMUSG00000040451 Sgms1 9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23 sphingomyelin synthase 1 protein-coding common_peak1_106_87_-0.00726558160813884_6.45579882783323_0.302270843793768-3 chr9 63895542 63896541 + 0.302270843793768 NA Intergenic B4|SINE|B4 126018 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak1_107_87_0.00606025268961741_6.46246174498211_0.302270843793768-2 chr5 93206583 93208194 + 0.302270843793768 NA promoter-TSS (NM_017367) promoter-TSS (NM_017367) 870 NM_029363 75610 Mm.175502 NM_029363 ENSMUSG00000029384 2010109A12Rik - RIKEN cDNA 2010109A12 gene protein-coding common_peak2_106_87_-0.00726558160813884_6.45579882783323_0.302270843793768-2 chr6 48085481 48086510 + 0.302270843793768 NA intron (NM_001362062, intron 1 of 5) CpG 598 NM_001347142 69228 Mm.207555 NM_001163475 ENSMUSG00000057691 Zfp746 2810407L07Rik|AI317225|Znf746 zinc finger protein 746 protein-coding common_peak1_105_88_-0.0370183552697814_6.45722425333151_0.302270843793743 chr1 136624971 136626331 + 0.302270843793743 NA exon (NM_177643, exon 2 of 2) exon (NM_177643, exon 2 of 2) 750 NM_001160251 226442 Mm.62521 NM_177643 ENSMUSG00000041483 Zfp281 Znf281 zinc finger protein 281 protein-coding common_peak2_105_88_-0.0370183552697814_6.45722425333151_0.302270843793743 chr17 17624825 17625890 + 0.302270843793743 NA promoter-TSS (NM_172827) promoter-TSS (NM_172827) -868 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_105_88_-0.0370183552697814_6.45722425333151_0.302270843793743-2 chr5 21492580 21493595 + 0.302270843793743 NA intron (NM_001199632, intron 18 of 20) intron (NM_001199632, intron 18 of 20) -50440 NM_028977 74511 Mm.439963 NM_028977 ENSMUSG00000039883 Lrrc17 37kDa|4833425M04Rik|6130400C22Rik|P37nb leucine rich repeat containing 17 protein-coding common_peak1_108_88_0.0029614541620484_6.47721415804742_0.302256822760962-2 chr14 25485292 25486750 + 0.302256822760962 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 26836 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_108_88_0.0029614541620484_6.47721415804742_0.302256822760962-3 chr19 4332990 4333937 + 0.302256822760962 NA intron (NM_001001984, intron 12 of 20) intron (NM_001001984, intron 12 of 20) -27241 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_108_88_0.0029614541620484_6.47721415804742_0.302256822760962 chr11 106788636 106789707 + 0.302256822760962 NA promoter-TSS (NM_177088) promoter-TSS (NM_177088) 14 NM_001355677 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding common_peak1_107_89_-0.0263612250027601_6.47867248382829_0.302256822760962 chr2 163348021 163349282 + 0.302256822760962 NA intron (NM_021566, intron 2 of 5) intron (NM_021566, intron 2 of 5) 49322 NM_021566 59091 Mm.34459 NM_021566 ENSMUSG00000017817 Jph2 1110002E14Rik|JP-2|Jp2 junctophilin 2 protein-coding common_peak2_107_89_-0.0263612250027601_6.47867248382829_0.302256822760962 chr4 150281667 150282673 + 0.302256822760962 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 254 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_109_89_-7.57745519806008e-05_6.49181520905368_0.302243115052196-3 chr7 4811642 4812626 + 0.302243115052196 NA intron (NM_133777, intron 1 of 3) CpG 206 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak2_109_89_-7.57745519806008e-05_6.49181520905368_0.302243115052196 chr11 103689461 103690894 + 0.302243115052196 NA intron (NM_019650, intron 1 of 5) intron (NM_019650, intron 1 of 5) 7533 NM_019650 56494 Mm.195451 NM_019650 ENSMUSG00000020946 Gosr2 2310032N09Rik|C76855|Gs27|SNARE|membrin golgi SNAP receptor complex member 2 protein-coding common_peak1_109_89_-7.57745519806008e-05_6.49181520905368_0.302243115052196-2 chr6 146899440 146900880 + 0.302243115052196 NA intron (NM_001355728, intron 1 of 30) intron (NM_001355728, intron 1 of 30) 11666 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_108_90_-0.0290997550702503_6.49324476266357_0.302243115052196 chr16 57121749 57122493 + 0.302243115052196 NA exon (NM_138599, exon 1 of 12) exon (NM_138599, exon 1 of 12) 407 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70A protein-coding common_peak1_108_90_-0.0290997550702503_6.49324476266357_0.302243115052196 chr4 150281572 150282595 + 0.302243115052196 NA intron (NM_001085492, intron 1 of 22) intron (NM_001085492, intron 1 of 22) 167 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_109_89_-7.57745519806008e-05_6.49181520905368_0.302243115052196 chr11 86623953 86625073 + 0.302243115052196 NA intron (NM_001356531, intron 7 of 11) intron (NM_001356531, intron 7 of 11) -40355 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_109_91_-0.0317846342793189_6.50766963891735_0.302229710280872 chr15 39942816 39943999 + 0.302229710280872 NA intron (NM_172814, intron 1 of 6) CpG 587 NM_001347036 239393 Mm.39874 NM_172814 ENSMUSG00000022305 Lrp12 AI848829|C820005L12Rik|LRP-12 low density lipoprotein-related protein 12 protein-coding common_peak2_110_92_-0.0344174473963781_6.52195008740984_0.302216598514532 chr8 11554955 11555770 + 0.302216598514532 NA promoter-TSS (NM_001302458) promoter-TSS (NM_001302458) -400 NM_001302458 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_112_91_0.00676074560323858_6.52694232885863_0.302216598514508 chr11 75679285 75679865 + 0.302216598514508 NA exon (NM_001277221, exon 1 of 2) exon (NM_001277221, exon 1 of 2) 316 NM_001277221 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding common_peak2_112_91_0.00676074560323858_6.52694232885863_0.302216598514508 chr13 51853634 51854594 + 0.302216598514508 NA Intergenic Intergenic 7439 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_111_91_-0.00597282141157685_6.52057554535122_0.302216598514508 chr5 146832944 146833632 + 0.302216598514508 NA intron (NM_019647, intron 1 of 5) CpG 398 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak2_111_91_-0.00597282141157685_6.52057554535122_0.302216598514508-2 chr9 67043241 67044871 + 0.302216598514508 NA promoter-TSS (NM_001164254) promoter-TSS (NM_001164254) -185 NM_001164256 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_112_91_0.00676074560323858_6.52694232885863_0.302216598514508-2 chr18 84589562 84590462 + 0.302216598514508 NA promoter-TSS (NM_001033341) promoter-TSS (NM_001033341) -508 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak2_112_93_-0.024266150017386_6.54245577666894_0.3022037702501 chr6 50454594 50455845 + 0.3022037702501 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 951 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_111_93_-0.0369997170322014_6.53608899316154_0.3022037702501 chr17 26252739 26253596 + 0.3022037702501 NA intron (NM_028190, intron 1 of 9) CpG 257 NR_037905 66978 Mm.440216 NM_025881 ENSMUSG00000024188 Luc7l 1810045C04Rik|2410018D03Rik Luc7-like protein-coding common_peak2_114_93_0.000866369299250991_6.55502203632726_0.302191216390815-2 chr6 85452137 85452944 + 0.302191216390815 NA promoter-TSS (NR_028081) promoter-TSS (NR_028081) -570 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak2_114_93_0.000866369299250991_6.55502203632726_0.302191216390815 chr5 136171175 136172980 + 0.302191216390815 NA Intergenic Intergenic -1421 NM_178751 269717 Mm.308396 NM_178751 ENSMUSG00000039747 Orai2 A730041O15Rik|Tmem142b ORAI calcium release-activated calcium modulator 2 protein-coding common_peak1_113_94_-0.0269115311315913_6.55639984276515_0.302191216390766-2 chr6 38549987 38551232 + 0.302191216390766 NA promoter-TSS (NM_138680) promoter-TSS (NM_138680) -725 NM_138680 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak2_113_94_-0.0269115311315913_6.55639984276515_0.302191216390766 chr2 31759501 31760436 + 0.302191216390766 NA promoter-TSS (NM_001283045) promoter-TSS (NM_001283045) 29 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_113_94_-0.0269115311315913_6.55639984276515_0.302191216390766 chr14 31963119 31964703 + 0.302191216390766 NA Intergenic Intergenic -65192 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding common_peak2_114_95_-0.0295072797442675_6.57020886084902_0.302178928225441 chr10 59322910 59324442 + 0.302178928225441 NA intron (NM_001316370, intron 1 of 13) CpG 380 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak1_116_95_-0.00480810138437793_6.58255845002897_0.302166897407499 chr15 78832662 78834271 + 0.302166897407499 NA Intergenic MIRc|SINE|MIR -9181 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_115_96_-0.032054800383106_6.58388544199557_0.302166897407475 chr2 28839758 28840813 + 0.302166897407475 NA promoter-TSS (NM_001166033) promoter-TSS (NM_001166033) 75 NM_172977 269252 Mm.26043 NM_172977 ENSMUSG00000035666 Gtf3c4 5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90 general transcription factor IIIC, polypeptide 4 protein-coding common_peak1_115_96_-0.032054800383106_6.58388544199557_0.302166897407475 chr12 32378570 32380226 + 0.302166897407475 NA exon (NM_001162903, exon 1 of 1) exon (NM_001162903, exon 1 of 1) 609 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding common_peak1_117_97_-0.0223637383657733_6.60352797493232_0.302155115936312 chr17 45745881 45746827 + 0.302155115936312 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 11848 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak2_117_97_-0.0223637383657733_6.60352797493232_0.302155115936312 chr14 25532005 25533194 + 0.302155115936312 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -1840 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_118_96_0.00452208515021013_6.60217388476223_0.302155115936312 chr15 59759923 59761200 + 0.302155115936312 NA Intergenic MER5B|DNA|hAT-Charlie 34398 NR_045076 100503021 Mm.402924 NR_045076 ENSMUSG00000115426 Gm19510 - predicted gene, 19510 ncRNA common_peak1_116_97_-0.0345554447784302_6.59743212172599_0.302155115936312 chr11 8462478 8463196 + 0.302155115936312 NA intron (NM_001083587, intron 20 of 30) intron (NM_001083587, intron 20 of 30) 201698 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_118_98_-0.0249216927422715_6.61689577370847_0.302143576139525 chr13 81782887 81784142 + 0.302143576139525 NA intron (NM_007684, intron 1 of 4) CpG 267 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_119_97_0.00171274193743276_6.61556621508393_0.302143576139525 chr7 128530798 128531980 + 0.302143576139525 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 7806 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_119_97_0.00171274193743276_6.61556621508393_0.302143576139525 chr19 5689690 5690622 + 0.302143576139525 NA 5' UTR (NM_022012, exon 3 of 12) 5' UTR (NM_022012, exon 3 of 12) 1025 NM_022012 26403 Mm.185026 NM_022012 ENSMUSG00000004054 Map3k11 2610017K16Rik|Mlk3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding common_peak1_118_98_-0.0249216927422715_6.61689577370847_0.302143576139525 chr8 111033908 111034432 + 0.302143576139525 NA 5' UTR (NM_146217, exon 1 of 21) 5' UTR (NM_146217, exon 1 of 21) 328 NM_146217 234734 Mm.24174 NM_146217 ENSMUSG00000031960 Aars AI316495|C76919|sti alanyl-tRNA synthetase protein-coding common_peak1_120_98_-0.00104585910328492_6.62883369052797_0.302132270656401-2 chr6 117879028 117880641 + 0.302132270656401 NA Intergenic ID4_|SINE|ID 16953 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding common_peak1_120_98_-0.00104585910328492_6.62883369052797_0.302132270656401 chr15 79074852 79076217 + 0.302132270656401 NA intron (NM_145139, intron 1 of 12) intron (NM_145139, intron 1 of 12) 311 NM_145139 223691 Mm.206404 NM_145139 ENSMUSG00000033047 Eif3l 0610011H21Rik|D15N1e|Eif3eip|Eif3ip|Eif3s6ip|HSP-66Y|PAF67 eukaryotic translation initiation factor 3, subunit L protein-coding common_peak2_119_99_-0.0274336037220833_6.63013938791368_0.302132270656376 chr17 45745850 45746887 + 0.302132270656376 NA intron (NR_152153, intron 1 of 4) intron (NR_152153, intron 1 of 4) 11862 NR_152153 433111 Mm.213441 NR_152153 ENSMUSG00000097727 F630040K05Rik - RIKEN cDNA F630040K05 gene ncRNA common_peak2_119_99_-0.0274336037220833_6.63013938791368_0.302132270656376-2 chr3 107774836 107776372 + 0.302132270656376 NA Intergenic Intergenic -15135 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_120_100_-0.0299007217754701_6.64326112186406_0.302121192422127-2 chr4 105157312 105158866 + 0.302121192422127 NA intron (NM_080555, intron 1 of 5) CpG 742 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak2_120_100_-0.0299007217754701_6.64326112186406_0.302121192422127 chr15 88732804 88733934 + 0.302121192422127 NA intron (NM_001033274, intron 1 of 12) intron (NM_001033274, intron 1 of 12) 850 NM_001033274 223770 Mm.254438 NM_001033274 ENSMUSG00000022387 Brd1 1110059H06Rik|AI316859|mKIAA4191 bromodomain containing 1 protein-coding common_peak1_120_100_-0.0299007217754701_6.64326112186406_0.302121192422127 chr4 3774746 3776080 + 0.302121192422127 NA intron (NM_001111096, intron 10 of 12) intron (NM_001111096, intron 10 of 12) 60242 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak2_121_99_-0.00375510004509216_6.64197863975218_0.302121192422102 chr6 71493934 71494851 + 0.302121192422102 NA 5' UTR (NM_001308303, exon 1 of 4) 5' UTR (NM_001308303, exon 1 of 4) 515 NM_001308303 22644 Mm.422969 NM_009543 ENSMUSG00000052656 Rnf103 AW146237|AW212918|Zfp103|kf-1 ring finger protein 103 protein-coding common_peak2_121_101_-0.032324252241863_6.65626321585056_0.302110334652898 chr16 23437836 23438881 + 0.302110334652898 NA Intergenic Intergenic 9225 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding common_peak2_121_101_-0.032324252241863_6.65626321585056_0.302110334652898-2 chr19 47886992 47888112 + 0.302110334652898 NA Intergenic Intergenic 21758 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_121_101_-0.032324252241863_6.65626321585056_0.302110334652898-2 chr5 107900575 107901604 + 0.302110334652898 NA intron (NM_016980, intron 1 of 7) intron (NM_016980, intron 1 of 7) 561 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding common_peak1_121_101_-0.032324252241863_6.65626321585056_0.302110334652898 chr13 70794587 70795788 + 0.302110334652898 NA intron (NM_172053, intron 6 of 22) intron (NM_172053, intron 6 of 22) 46624 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding common_peak1_122_100_-0.00641631292390166_6.65500332628984_0.302110334652873 chr2 144009920 144011183 + 0.302110334652873 NA intron (NM_133626, intron 1 of 2) CpG 712 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding common_peak2_122_100_-0.00641631292390166_6.65500332628984_0.302110334652873-2 chr3 53041024 53042431 + 0.302110334652873 NA 5' UTR (NM_175386, exon 1 of 4) 5' UTR (NM_175386, exon 1 of 4) 180 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_123_100_0.00518307722774303_6.66080302136567_0.302110334652873 chr17 29490884 29492151 + 0.302110334652873 NA intron (NM_008842, intron 2 of 5) CpG-6203 472 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_122_100_-0.00641631292390166_6.65500332628984_0.302110334652873 chr1 55131251 55132064 + 0.302110334652873 NA intron (NM_001310585, intron 1 of 6) CpG 412 NM_025283 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding common_peak1_123_100_0.00518307722774303_6.66080302136567_0.302110334652873 chr4 88936720 88938223 + 0.302110334652873 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 4571 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak2_123_102_-0.0231059672036809_6.67494754358138_0.302099690832379 chr11 97362361 97363477 + 0.302099690832379 NA exon (NM_138657, exon 1 of 10) exon (NM_138657, exon 1 of 10) 368 NM_138657 192157 Mm.34339 NM_138657 ENSMUSG00000038485 Socs7 2310063P06Rik|C85125|Nap4 suppressor of cytokine signaling 7 protein-coding common_peak2_122_102_-0.0347053573553255_6.66914784850556_0.302099690832379 chr5 113771317 113772201 + 0.302099690832379 NA non-coding (NR_151532, exon 1 of 17) non-coding (NR_151532, exon 1 of 17) 641 NR_151532 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding common_peak1_122_102_-0.0347053573553255_6.66914784850556_0.302099690832379 chr16 91043652 91044515 + 0.302099690832379 NA exon (NM_026110, exon 1 of 18) exon (NM_026110, exon 1 of 18) 296 NM_026110 67367 Mm.347 NM_026110 ENSMUSG00000022974 Paxbp1 1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp PAX3 and PAX7 binding protein 1 protein-coding common_peak1_125_102_-0.000185208509627444_6.6864079229284_0.302089254698767 chr2 5844430 5845787 + 0.302089254698767 NA promoter-TSS (NM_016918) promoter-TSS (NM_016918) 69 NM_001356502 98828 Mm.181490 NM_133837 ENSMUSG00000039128 Cdc123 AA959893|G431001I09Rik cell division cycle 123 protein-coding common_peak1_124_103_-0.0255389368081484_6.68767024973702_0.302089254698743 chr2 49451062 49452294 + 0.302089254698743 NA 5' UTR (NM_172663, exon 1 of 14) 5' UTR (NM_172663, exon 1 of 14) 192 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 protein-coding common_peak2_126_105_-0.0302808329892832_6.71278003806856_0.302068981642426 chr19 55742296 55743109 + 0.302068981642426 NA intron (NR_138565, intron 1 of 15) CpG 892 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding common_peak2_128_104_0.0057776351975205_6.71713433526488_0.302068981642426 chr15 95803092 95804187 + 0.302068981642426 NA intron (NM_175344, intron 1 of 19) intron (NM_175344, intron 1 of 19) 12796 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak1_126_105_-0.0302808329892832_6.71278003806856_0.302068981642426 chr4 127355004 127356380 + 0.302068981642426 NA exon (NM_010291, exon 2 of 2) exon (NM_010291, exon 2 of 2) -1611 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak1_129_105_0.00316465949930489_6.72950278431285_0.302059133359974 chr4 114986536 114987865 + 0.302059133359974 NA promoter-TSS (NM_025647) promoter-TSS (NM_025647) 28 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding common_peak1_129_105_0.00316465949930489_6.72950278431285_0.302059133359974-2 chr9 107554769 107555743 + 0.302059133359974 NA intron (NM_019713, intron 1 of 4) intron (NM_019713, intron 1 of 4) 673 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak2_129_105_0.00316465949930489_6.72950278431285_0.302059133359974 chr3 57303130 57304394 + 0.302059133359974 NA Intergenic Intergenic -1774 NM_001355130 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding common_peak2_127_106_-0.032591880903083_6.7251710459496_0.302059133359974 chr10 31608447 31609708 + 0.302059133359974 NA exon (NM_001146349, exon 1 of 6) exon (NM_001146349, exon 1 of 6) 648 NM_001146349 268291 Mm.295212 NM_001146349 ENSMUSG00000063760 Rnf217 AU016819|Ibrdc1 ring finger protein 217 protein-coding common_peak2_130_106_0.000595322041244017_6.74176464742177_0.30204947002389 chr8 120668308 120669171 + 0.30204947002389 NA promoter-TSS (NM_010926) promoter-TSS (NM_010926) 419 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit 4I1 protein-coding common_peak2_131_107_-0.00193147691219853_6.75392176370737_0.302039986472884 chr6 65042640 65043739 + 0.302039986472884 NA promoter-TSS (NM_001253392) promoter-TSS (NM_001253392) -17 NM_001253392 13990 Mm.99113 NM_007958 ENSMUSG00000029920 Smarcad1 AV081750|AW226546|D6Pas1|Etl1|etl-1|mKIAA1122 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding common_peak1_131_107_-0.00193147691219853_6.75392176370737_0.302039986472884 chr1 178405787 178406754 + 0.302039986472884 NA intron (NM_026626, intron 1 of 6) CpG 252 NM_026626 68226 Mm.252132 NM_026626 ENSMUSG00000026495 Efcab2 1700073K01Rik|D830011E08Rik EF-hand calcium binding domain 2 protein-coding common_peak2_131_107_-0.00193147691219853_6.75392176370737_0.302039986472884-2 chr6 85373619 85374591 + 0.302039986472884 NA exon (NM_177466, exon 1 of 5) exon (NM_177466, exon 1 of 5) 529 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding common_peak1_131_107_-0.00193147691219853_6.75392176370737_0.302039986472884-2 chr4 43397952 43398720 + 0.302039986472884 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -8166 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_130_108_-0.0261220163345355_6.75512331660966_0.30203998647286 chr1 183114216 183116121 + 0.30203998647286 NA intron (NM_001278218, intron 3 of 8) intron (NM_001278218, intron 3 of 8) 32389 NM_001278220 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak2_130_108_-0.0261220163345355_6.75512331660966_0.30203998647286 chr5 65491874 65493384 + 0.30203998647286 NA intron (NM_133697, intron 1 of 4) CpG 206 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding common_peak2_133_108_0.00631371329021757_6.77134118142203_0.302030677735507 chr16 36875184 36876426 + 0.302030677735507 NA promoter-TSS (NM_134111) promoter-TSS (NM_134111) -979 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak2_132_108_-0.00441680023089308_6.76597592466148_0.302030677735507 chr9 70207409 70208593 + 0.302030677735507 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 651 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_132_110_-0.0306483418040733_6.77909169544807_0.302021539022609 chr13 95523696 95525245 + 0.302021539022609 NA intron (NM_007974, intron 1 of 1) CpG 770 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_134_109_0.00378905655613426_6.78325424180273_0.302021539022609 chr4 57956603 57957880 + 0.302021539022609 NA promoter-TSS (NM_011660) promoter-TSS (NM_011660) -830 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak1_135_110_0.00130503183985731_6.79506838227003_0.302012565718108 chr1 171247444 171249061 + 0.302012565718108 NA Intergenic Intergenic -1130 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak2_135_110_0.00130503183985731_6.79506838227003_0.302012565718108 chr9 102674012 102675562 + 0.302012565718108 NA Intergenic Intergenic -43017 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_134_111_-0.0222061519768095_6.7962518460692_0.302012565718108 chr8 70649042 70650225 + 0.302012565718108 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 10105 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_136_111_-0.00113934794182402_6.80678524808669_0.302003753371235 chr13 3538189 3539501 + 0.302003753371235 NA intron (NM_008112, intron 1 of 10) intron (NM_008112, intron 1 of 10) 770 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak2_135_112_-0.0244580642252243_6.80794993030258_0.302003753371235 chr9 34992998 34994682 + 0.302003753371235 NA intron (NM_001190912, intron 4 of 15) intron (NM_001190912, intron 4 of 15) -122888 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_136_113_-0.0266744400489616_6.81955279414026_0.301995097689947 chr2 151916564 151917629 + 0.301995097689947 NA intron (NM_009641, intron 1 of 8) MIRb|SINE|MIR 5889 NM_009641 11602 Mm.189536 NM_009641 ENSMUSG00000027460 Angpt4 ANG-3|ANG-4|Agpt4|Ang3 angiopoietin 4 protein-coding common_peak1_137_114_-0.0288561264939098_6.83106198769742_0.301986594533085 chr8 72547427 72548171 + 0.301986594533085 NA intron (NM_027485, intron 1 of 2) CpG 511 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak2_137_114_-0.0288561264939098_6.83106198769742_0.301986594533085-2 chr2 126363765 126364831 + 0.301986594533085 NA intron (NM_001359975, intron 20 of 27) intron (NM_001359975, intron 20 of 27) 127255 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_139_113_0.0043560192345744_6.83506802378203_0.301986594533085-2 chr7 112427232 112428502 + 0.301986594533085 NA 5' UTR (NM_020606, exon 1 of 13) 5' UTR (NM_020606, exon 1 of 13) 161 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha protein-coding common_peak1_138_113_-0.00591296278165476_6.82993353277391_0.301986594533085 chr11 94629841 94630975 + 0.301986594533085 NA intron (NM_133807, intron 1 of 6) intron (NM_133807, intron 1 of 6) 584 NM_133807 98238 Mm.172720 NM_133807 ENSMUSG00000020869 Lrrc59 AA959742|C78668 leucine rich repeat containing 59 protein-coding common_peak2_139_113_0.0043560192345744_6.83506802378203_0.301986594533085 chr15 102100075 102101521 + 0.301986594533085 NA Intergenic Intergenic -2136 NM_001355636 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_137_114_-0.0288561264939098_6.83106198769742_0.301986594533085 chr10 40882372 40884330 + 0.301986594533085 NA promoter-TSS (NM_031877) promoter-TSS (NM_031877) -183 NM_031877 83767 Mm.41353 NM_031877 ENSMUSG00000019831 Wasf1 AI195380|AI838537|Scar|WAVE|WAVE-1 WAS protein family, member 1 protein-coding common_peak2_138_115_-0.0310039437444853_6.84247902325533_0.301978239904549-2 chr19 6046686 6047432 + 0.301978239904549 NA promoter-TSS (NM_001164709) promoter-TSS (NM_001164709) -86 NM_001164709 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak2_139_115_-0.0207349617282562_6.84761351426344_0.301978239904549-2 chr8 12757047 12758035 + 0.301978239904549 NA intron (NM_015804, intron 1 of 28) CpG 525 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak2_139_115_-0.0207349617282562_6.84761351426344_0.301978239904549 chr16 55817236 55819052 + 0.301978239904549 NA exon (NM_001159394, exon 5 of 12) exon (NM_001159394, exon 5 of 12) 3994 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_138_115_-0.0310039437444853_6.84247902325533_0.301978239904549 chr18 80469120 80470520 + 0.301978239904549 NA promoter-TSS (NM_026295) promoter-TSS (NM_026295) -153 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak2_140_116_-0.0229227936271394_6.85890332276984_0.301970029946241-2 chrX 73965726 73967605 + 0.301970029946241 NA promoter-TSS (NM_008224) promoter-TSS (NM_008224) -308 NM_008224 15161 Mm.491126 NM_008224 ENSMUSG00000031386 Hcfc1 AW060991|HCF|HCF1 host cell factor C1 protein-coding common_peak2_140_116_-0.0229227936271394_6.85890332276984_0.301970029946241 chr10 96621847 96623500 + 0.301970029946241 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 5672 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_142_116_-0.00274616632227165_6.86899163642227_0.301961960932715 chr1 82597553 82599152 + 0.301961960932715 NA intron (NM_007734, intron 1 of 51) intron (NM_007734, intron 1 of 51) 11431 NM_007734 12828 Mm.389135 NM_007734 ENSMUSG00000079465 Col4a3 [a]3(IV)|alpha3(IV) collagen, type IV, alpha 3 protein-coding common_peak2_141_117_-0.0250772872283536_6.87010440574766_0.301961960932715 chr11 16843538 16845680 + 0.301961960932715 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 92406 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_143_117_-0.00504175983562494_6.88012216944403_0.301954029265304 chr15 3979036 3979848 + 0.301954029265304 NA 5' UTR (NM_134099, exon 1 of 7) 5' UTR (NM_134099, exon 1 of 7) 131 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak1_143_117_-0.00504175983562494_6.88012216944403_0.301954029265304 chr15 36374704 36376126 + 0.301954029265304 NA Intergenic Intergenic -92268 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak2_145_118_0.00254269268473895_6.89608910965031_0.301946231466862 chr16 10785387 10786626 + 0.301946231466862 NA promoter-TSS (NM_001271603) promoter-TSS (NM_001271603) -470 NM_001271603 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak1_144_119_-0.0193756550506166_6.89720276808321_0.301946231466862 chr4 117914239 117915808 + 0.301946231466862 NA promoter-TSS (NM_146152) promoter-TSS (NM_146152) -24 NM_146152 230673 Mm.287810 NM_146152 ENSMUSG00000033365 Ipo13 Imp13|Kap13|Ranbp13 importin 13 protein-coding common_peak2_143_119_-0.0292893060823021_6.89224594256737_0.301946231466862 chr4 131873087 131874617 + 0.301946231466862 NA exon (NM_020587, exon 1 of 6) exon (NM_020587, exon 1 of 6) 213 NM_020587 57317 Mm.2478 NM_020587 ENSMUSG00000028911 Srsf4 5730499P16Rik|AW550192|MNCb-2616|SRp75|Sfrs4 serine/arginine-rich splicing factor 4 protein-coding common_peak1_145_120_-0.021502781281912_6.90811184663364_0.30193856417663 chr11 78245141 78246270 + 0.30193856417663 NA promoter-TSS (NM_009297) promoter-TSS (NM_009297) -2 NM_009297 20926 Mm.20755 NM_009297 ENSMUSG00000002052 Supt6 5131400N11Rik|AI132449|SPT6|Supt6h|mKIAA0162 suppressor of Ty 6 protein-coding common_peak2_148_123_-0.0276989138616086_6.94034685345607_0.301916313394054 chr1 152901891 152903127 + 0.301916313394054 NA exon (NM_001160256, exon 1 of 23) exon (NM_001160256, exon 1 of 23) 136 NM_001359257 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_150_122_0.00308339891779941_6.94405620479814_0.301916313394054 chr3 90247699 90249120 + 0.301916313394054 NA intron (NM_013901, intron 1 of 3) CpG 217 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding common_peak1_152_124_-0.00133720244396951_6.9651156834401_0.301902075281249-2 chr7 126976064 126977350 + 0.301902075281249 NA promoter-TSS (NM_001362232) promoter-TSS (NM_001362232) 793 NM_001347656 52858 Mm.28219 NM_026638 ENSMUSG00000030682 Cdipt 9530042F15Rik|D7Bwg0575e|Pis|Pis1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) protein-coding common_peak1_152_124_-0.00133720244396951_6.9651156834401_0.301902075281249 chr7 66369448 66371599 + 0.301902075281249 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 11201 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_153_125_-0.0035004509019716_6.97552969804893_0.301895126402722 chr19 6046615 6047530 + 0.301895126402722 NA promoter-TSS (NM_001164709) promoter-TSS (NM_001164709) -73 NM_001164709 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak1_153_125_-0.0035004509019716_6.97552969804893_0.301895126402722-2 chr2 52741698 52742770 + 0.301895126402722 NA promoter-TSS (NM_019667) promoter-TSS (NM_019667) -85 NM_019667 56324 Mm.263639 NM_019667 ENSMUSG00000055371 Stam2 1200004O12Rik|5730456G07Rik|BB145015|Hbp signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein-coding common_peak1_155_126_0.00357913076391458_6.99047425215412_0.301888287388725 chr17 70997978 71000561 + 0.301888287388725 NA intron (NM_026064, intron 1 of 3) intron (NM_026064, intron 1 of 3) -1257 NM_001357820 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak2_154_126_-0.00563322803874922_6.98586807275279_0.301888287388725 chr2 152820761 152822737 + 0.301888287388725 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 6740 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_153_127_-0.0262205274020548_6.98688973629897_0.301888287388725 chr13 16017216 16019137 + 0.301888287388725 NA intron (NM_008380, intron 4 of 4) intron (NM_008380, intron 4 of 4) 5247 NR_155430 100503142 Mm.359204 NR_155430 B230303A05Rik B230303A05|EG328191 U1 small nuclear ribonucleoprotein 1C pseudogene pseudo common_peak1_155_128_-0.0189634378871739_7.00174553647967_0.301881555654304 chr2 10079639 10081114 + 0.301881555654304 NA promoter-TSS (NM_025280) promoter-TSS (NM_025280) 134 NM_020615 11949 Mm.12677 NM_020615 ENSMUSG00000025781 Atp5c1 1700094F02Rik|Atp5f1c ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein-coding common_peak1_154_128_-0.0281757966898377_6.99713935707834_0.301881555654304 chr13 31807253 31808774 + 0.301881555654304 NA exon (NM_008592, exon 1 of 1) exon (NM_008592, exon 1 of 1) 1367 NM_008592 17300 Mm.12949 NM_008592 ENSMUSG00000050295 Foxc1 FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda forkhead box C1 protein-coding common_peak1_156_129_-0.0209505020040481_7.01189256202643_0.301874928694689 chr15 77885103 77886290 + 0.301874928694689 NA Intergenic Intergenic 43298 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_160_130_0.00403437025968945_7.03544018666729_0.301861979465562 chr17 3114084 3116040 + 0.301861979465562 NA promoter-TSS (NM_134123) promoter-TSS (NM_134123) 90 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak2_158_131_-0.0248434414343821_7.03197239864126_0.301861979465562 chr2 109693593 109694837 + 0.301861979465562 NA promoter-TSS (NM_001316310) promoter-TSS (NM_001316310) -194 NM_001316310 12064 Mm.1442 NM_007540 ENSMUSG00000048482 Bdnf - brain derived neurotrophic factor protein-coding common_peak1_159_132_-0.0267504312492477_7.04190721987657_0.301855652561884 chr7 29247032 29248299 + 0.301855652561884 NA TTS (NM_001110201) TTS (NM_001110201) 802 NM_028179 72275 Mm.441142 NM_028179 ENSMUSG00000030587 2200002D01Rik 2010005J02Rik|H2RSP|IMUP|IMUP-1|IMUP-2 RIKEN cDNA 2200002D01 gene protein-coding common_peak2_162_132_-0.000139445776765612_7.05521271261281_0.301849421159484 chr1 62720765 62722026 + 0.301849421159484 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 18078 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak1_161_133_-0.0197617169034023_7.05620833200607_0.301849421159484 chr1 135818676 135820352 + 0.301849421159484 NA intron (NM_133664, intron 1 of 9) intron (NM_133664, intron 1 of 9) 916 NM_133664 16763 Mm.36726 NM_133664 ENSMUSG00000041782 Lad1 LADA|lad-1 ladinin protein-coding common_peak2_162_132_-0.000139445776765612_7.05521271261281_0.301849421159484-2 chr7 139247916 139249739 + 0.301849421159484 NA intron (NM_001098636, intron 1 of 2) CpG 345 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_659_531_0.0032205293574723_9.05689270017993_0.301846339155496 chr8 128684051 128688918 + 0.301846339155496 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 830 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_163_133_-0.00218460243057805_7.06499688924248_0.301843283111981 chr4 155704702 155705888 + 0.301843283111981 NA 5' UTR (NM_026899, exon 1 of 5) 5' UTR (NM_026899, exon 1 of 5) 480 NM_026899 68991 Mm.294770 NM_026899 ENSMUSG00000029038 Ssu72 1190002E22Rik|1500011L16Rik|2610101M12Rik Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) protein-coding common_peak2_163_133_-0.00218460243057805_7.06499688924248_0.301843283111981-2 chr5 96793515 96795028 + 0.301843283111981 NA intron (NM_013470, intron 1 of 12) intron (NM_013470, intron 1 of 12) 886 NM_013470 11745 Mm.7214 NM_013470 ENSMUSG00000029484 Anxa3 Anx3 annexin A3 protein-coding common_peak1_163_135_-0.0235582532231451_7.07568371463877_0.301837236337243 chr11 32347329 32348981 + 0.301837236337243 NA intron (NM_177364, intron 1 of 12) CpG 344 NM_177364 268396 Mm.227616 NM_177364 ENSMUSG00000040711 Sh3pxd2b G431001E03Rik|TSK4|fad49 SH3 and PX domains 2B protein-coding common_peak1_167_136_0.000392653912365759_7.09822840991671_0.301825408581719 chrX 96131995 96134004 + 0.301825408581719 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 36954 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_168_137_-0.00159811123222653_7.10772540116206_0.301819623734886 chrX 94121772 94123592 + 0.301819623734886 NA intron (NM_001358356, intron 1 of 8) CpG 725 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak2_169_138_-0.00356327577966553_7.11715943483367_0.301813922424374 chr2 160645986 160647073 + 0.301813922424374 NA intron (NM_009408, intron 1 of 20) CpG 632 NM_009408 21969 Mm.217233 NM_009408 ENSMUSG00000070544 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I protein-coding common_peak2_173_141_-0.00105347547320456_7.14922038176808_0.301797301999125 chr8 94984489 94985785 + 0.301797301999125 NA intron (NM_018882, intron 1 of 13) intron (NM_018882, intron 1 of 13) 738 NM_018882 14766 Mm.290834 NM_018882 ENSMUSG00000031785 Adgrg1 Cyt28|Gpr56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding common_peak1_173_141_-0.00105347547320456_7.14922038176808_0.301797301999125 chr3 116661220 116662635 + 0.301797301999125 NA intron (NM_008246, intron 1 of 11) intron (NM_008246, intron 1 of 11) 750 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding common_peak2_176_143_0.00325670653457699_7.1715533547096_0.301786607790524 chr8 70646149 70647725 + 0.301786607790524 NA 3' UTR (NM_023217, exon 5 of 5) 3' UTR (NM_023217, exon 5 of 5) 12801 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_174_144_-0.0230061578617402_7.16840601108406_0.301786607790524 chr2 164440995 164443189 + 0.301786607790524 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 1096 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding common_peak1_175_145_-0.0247591154294451_7.1774450011653_0.301781371699478 chr11 4299531 4301412 + 0.301781371699478 NA Intergenic Intergenic 33675 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_175_145_-0.0247591154294451_7.1774450011653_0.301781371699478-2 chr8 11382993 11384236 + 0.301781371699478 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -70788 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_178_147_-0.0201757932924425_7.19936546898273_0.301771113965979 chr7 73556980 73558420 + 0.301771113965979 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 695 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_179_148_-0.021910332182066_7.20821335437113_0.301766089415829 chr13 16011398 16013303 + 0.301766089415829 NA 5' UTR (NM_008380, exon 2 of 5) 5' UTR (NM_008380, exon 2 of 5) 499 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak2_183_149_-7.53478461144041e-05_7.22878101657282_0.301756241970753 chr8 85298696 85300213 + 0.301756241970753 NA promoter-TSS (NM_022997) promoter-TSS (NM_022997) 43 NM_022997 65114 Mm.296520 NM_022997 ENSMUSG00000031696 Vps35 AI647796|Mem3 VPS35 retromer complex component protein-coding common_peak1_183_149_-7.53478461144041e-05_7.22878101657282_0.301756241970753 chr9 63746433 63747793 + 0.301756241970753 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 10881 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_184_150_-0.00189705866024692_7.23745620999495_0.301751416396224 chr15 101283927 101285037 + 0.301751416396224 NA 5' UTR (NM_026566, exon 1 of 3) 5' UTR (NM_026566, exon 1 of 3) 181 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding common_peak2_187_154_-0.0165730611186712_7.2678378747149_0.301737316917986 chr1 155236358 155238291 + 0.301737316917986 NA Intergenic Intergenic 78621 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_192_156_0.0025316215785649_7.29588655968091_0.301723757997487 chr11 75654426 75657129 + 0.301723757997487 NA promoter-TSS (NM_001080775) promoter-TSS (NM_001080775) -238 NM_001080775 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak2_193_159_-0.0173725200495287_7.3132418348626_0.301715003869406 chr1 134406011 134408109 + 0.301715003869406 NA exon (NM_001355133, exon 4 of 9) exon (NM_001355133, exon 4 of 9) 1279 NR_149307 72017 Mm.280230 NM_028057 ENSMUSG00000026456 Cyb5r1 1500005G05Rik|B5R.1|C80155|Nqo3a2 cytochrome b5 reductase 1 protein-coding common_peak1_196_160_-0.00437851603994144_7.32872762009465_0.301706467913782 chr7 128459619 128461688 + 0.301706467913782 NA intron (NM_001347641, intron 1 of 12) intron (NM_001347641, intron 1 of 12) 860 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding common_peak1_199_162_-0.000539251225257331_7.34845852861845_0.301698142075109 chr15 38470011 38471611 + 0.301698142075109 NA Intergenic CpG 19736 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_200_165_-0.0197057910523259_7.36518653582076_0.301690018689153 chr8 35587562 35589099 + 0.301690018689153 NA 5' UTR (NM_001081279, exon 1 of 3) 5' UTR (NM_001081279, exon 1 of 3) 532 NM_001081279 52065 Mm.103246 NM_001081279 ENSMUSG00000070056 Mfhas1 2310066G09Rik|D8Ertd91e malignant fibrous histiocytoma amplified sequence 1 protein-coding common_peak1_204_166_-0.000142805692979309_7.38363288962756_0.301682090460808 chr8 24418661 24420206 + 0.301682090460808 NA Intergenic Intergenic 19513 NM_026931 69068 Mm.25775 NM_026931 ENSMUSG00000056313 Tcim 1110065B09Rik|1810011O10Rik|AW121743|AW321058 transcriptional and immune response regulator protein-coding common_peak2_206_168_-0.00340990960426524_7.39917448148005_0.3016743504404 chr8 89041498 89043777 + 0.3016743504404 NA intron (NM_021390, intron 1 of 3) CpG-14342 1525 NM_021390 58198 Mm.214361 NM_021390 ENSMUSG00000031665 Sall1 Msal-3 spalt like transcription factor 1 protein-coding common_peak2_208_171_-0.0150209213509305_7.41875429402663_0.301666792004699 chr10 128493180 128495326 + 0.301666792004699 NA promoter-TSS (NM_010860) promoter-TSS (NM_010860) -367 NM_010860 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_212_172_0.00377313672421753_7.43651479599883_0.301659408837815 chr8 69716144 69716946 + 0.301659408837815 NA 5' UTR (NM_001359086, exon 1 of 6) 5' UTR (NM_001359086, exon 1 of 6) 357 NM_001039967 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding common_peak2_213_173_0.00216756160718745_7.44402727665232_0.301655781086198 chr13 51846714 51848405 + 0.301655781086198 NA exon (NM_011817, exon 3 of 4) exon (NM_011817, exon 3 of 4) 884 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_212_174_-0.0128097474713869_7.44480623809664_0.301655781086198 chr13 63044185 63047460 + 0.301655781086198 NA intron (NM_001289926, intron 3 of 15) intron (NM_001289926, intron 3 of 15) 80929 NM_001289924 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_213_175_-0.0143205611813819_7.45227133804661_0.301652194913591 chr18 46597788 46599248 + 0.301652194913591 NA promoter-TSS (NM_025698) promoter-TSS (NM_025698) 814 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding common_peak2_214_176_-0.0158160802661751_7.45969750994991_0.301648649609066 chr17 28328268 28329979 + 0.301648649609066 NA 5' UTR (NM_001357628, exon 3 of 6) 5' UTR (NM_001357628, exon 3 of 6) 558 NM_001357628 19896 Mm.336955 NM_011287 ENSMUSG00000037805 Rpl10a CsA-19|Nedd6 ribosomal protein L10A protein-coding common_peak2_219_180_-0.0151235448787546_7.49228411464383_0.301634863412759 chr7 112023124 112024707 + 0.301634863412759 NA intron (NM_133758, intron 1 of 27) CpG 409 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak2_221_182_-0.0180134541456347_7.50669311121123_0.301628198186408 chr8 120317739 120319573 + 0.301628198186408 NA Intergenic Intergenic -90426 NR_110496 434353 Mm.411793 NR_110496 ENSMUSG00000097960 A330074K22Rik - RIKEN cDNA A330074K22 gene ncRNA common_peak1_225_183_-0.000294233970006275_7.52341483907201_0.301621678251601 chr2 145785663 145787593 + 0.301621678251601 NA intron (NM_028724, intron 2 of 12) intron (NM_028724, intron 2 of 12) 512 NM_028724 74030 Mm.228799 NM_028724 ENSMUSG00000001768 Rin2 2010003K16Rik|4632403N06Rik|AW821980|RASSF4 Ras and Rab interactor 2 protein-coding common_peak1_229_186_0.00150578151600733_7.54764735064564_0.301612160546307 chr9 102721765 102723841 + 0.301612160546307 NA intron (NM_019764, intron 2 of 9) intron (NM_019764, intron 2 of 9) 4999 NM_019764 56332 Mm.21145 NM_019764 ENSMUSG00000032531 Amotl2 AW549739|C79691|Lccp|MASCOT|mKIAA0989 angiomotin-like 2 protein-coding common_peak1_230_187_2.62231477616837e-05_7.55460196325152_0.301609055659523 chr3 37937673 37939182 + 0.301609055659523 NA intron (NR_040559, intron 2 of 3) intron (NR_040559, intron 2 of 3) 39614 NR_040559 626410 Mm.389417 NR_040559 ENSMUSG00000106461 Gm20755 - predicted gene, 20755 ncRNA common_peak1_234_190_0.00177941487369537_7.5783185354726_0.301599936583344 chr11 96975972 96977705 + 0.301599936583344 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 850 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_236_194_-0.0159820248201239_7.59933930133955_0.301591100270147 chr19 5724878 5726208 + 0.301591100270147 NA intron (NM_001114595, intron 1 of 17) intron (NM_001114595, intron 1 of 17) 774 NM_001114595 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding common_peak1_242_199_-0.0166931139928996_7.63550963277827_0.301576966622439 chr12 51828700 51830683 + 0.301576966622439 NA promoter-TSS (NM_144788) promoter-TSS (NM_144788) -155 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain E3 ubiquitin protein ligase 1 protein-coding common_peak2_247_203_-0.0160857615652015_7.66438246118889_0.301566162235935 chr15 25411612 25413729 + 0.301566162235935 NA intron (NM_027395, intron 1 of 1) CpG 1094 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_260_211_0.00160879169573391_7.72872485041107_0.301543346593568 chr5 105791348 105793945 + 0.301543346593568 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -83922 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_261_214_-0.0131855207203149_7.7416000892293_0.301538537676643 chr11 51915450 51917913 + 0.301538537676643 NA Intergenic Intergenic -50950 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak2_267_219_-0.0139166550307603_7.77440138600928_0.301526900539203 chr8 34814608 34816089 + 0.301526900539203 NA intron (NM_176933, intron 1 of 3) intron (NM_176933, intron 1 of 3) 7738 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak2_274_223_-0.00297568109927582_7.80586708150797_0.30151578408021 chr3 52268373 52270357 + 0.30151578408021 NA exon (NM_019739, exon 1 of 3) exon (NM_019739, exon 1 of 3) 1028 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_282_229_-3.22431359522923e-05_7.8454739293764_0.301503083709262 chr19 5473536 5475885 + 0.301503083709262 NA promoter-TSS (NM_001164352) promoter-TSS (NM_001164352) 20 NM_021474 58859 Mm.276367 NM_021474 ENSMUSG00000024909 Efemp2 0610011K11Rik|Fbln4|MBP1 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 protein-coding common_peak2_281_230_-0.0113620950330366_7.84606799389954_0.301503083709262 chr3 121426554 121428466 + 0.301503083709262 NA intron (NM_028044, intron 1 of 6) intron (NM_028044, intron 1 of 6) 969 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak2_313_254_8.89459230446477e-06_7.99435788415501_0.30145661134311 chr15 12117168 12119191 + 0.30145661134311 NA intron (NM_001358823, intron 1 of 18) CpG 328 NM_001358823 22763 Mm.273496 NM_011767 ENSMUSG00000022201 Zfr C920030H05Rik zinc finger RNA binding protein protein-coding common_peak2_314_255_-0.0010827621457743_7.99945861892711_0.301454941612095 chr17 44733356 44736547 + 0.301454941612095 NA intron (NR_073392, intron 2 of 7) CpG 1225 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_316_256_0.00235928131108132_8.00680418984942_0.301453284900791 chr18 60735151 60737857 + 0.301453284900791 NA intron (NM_001348146, intron 1 of 6) B3|SINE|B2 -3363 NM_001348102 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_323_262_0.000353504688822781_8.03909574163671_0.301443609706411 chr17 25272195 25274319 + 0.301443609706411 NA promoter-TSS (NR_027452) promoter-TSS (NR_027452) 174 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak1_331_269_-0.00260193530640151_8.07551462939763_0.301432866471957 chr15 99368208 99370451 + 0.301432866471957 NA intron (NM_001310622, intron 1 of 25) intron (NM_001310622, intron 1 of 25) 1153 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_337_275_-0.0086530908054705_8.10419791137543_0.301425528197839 chr15 78842304 78844849 + 0.301425528197839 NA intron (NM_027219, intron 1 of 2) intron (NM_027219, intron 1 of 2) 929 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_351_285_-0.00186087290106229_8.15894090032786_0.301410288749697 chr9 63754218 63758161 + 0.301410288749697 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 1805 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_363_294_0.00146114106030737_8.20530171477936_0.301398666878366 chr15 28023875 28025936 + 0.301398666878366 NA intron (NM_001081302, intron 1 of 56) CpG 943 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_396_321_-0.000567323232646189_8.3306332164983_0.301367705350705 chr8 126586571 126590591 + 0.301367705350705 NA 3' UTR (NM_001164598, exon 2 of 2) 3' UTR (NM_001164598, exon 2 of 2) 4855 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_455_368_0.00135711199247268_8.52815556205663_0.301324632444798 chr2 72285823 72289231 + 0.301324632444798 NA intron (NM_023057, intron 1 of 19) intron (NM_023057, intron 1 of 19) 1826 NM_178084 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|HCCS-4|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak1_804_650_-0.00350942176110536_9.34475902228508_0.301197160607918 chr17 70847723 70853762 + 0.301197160607918 NA promoter-TSS (NM_001164076) promoter-TSS (NM_001164076) 468 NM_009372 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_397_323_-0.00589663010991437_8.33690168782967_0.301029995664204 chr5 142814796 142817598 + 0.301029995664204 NA intron (NM_178242, intron 1 of 15) CpG-11746 1190 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak1_89_74_-0.0245055226425412_6.21656592917461_0.301029995664056 chr10 67726664 67727582 + 0.301029995664056 NA Intergenic Intergenic -155164 NR_155444 105245193 Mm.72938 NR_155444 4930563J15Rik - RIKEN cDNA 4930563J15 gene ncRNA common_peak2_120_99_-0.0155454287983998_6.63608347537552_0.301029995664044 chr8 84191677 84192648 + 0.301029995664044 NA Intergenic Intergenic -13201 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_98_81_-0.0167053975661151_6.34919930583503_0.301029995664044 chr15 9140595 9141347 + 0.301029995664044 NA promoter-TSS (NM_013787) promoter-TSS (NM_013787) 401 NM_177178 320506 Mm.259886 NM_177178 ENSMUSG00000039704 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 protein-coding common_peak2_135_111_-0.0116340238676402_6.80153791012378_0.301029995664044 chr12 55154724 55156256 + 0.301029995664044 NA 5' UTR (NM_001100109, exon 1 of 16) 5' UTR (NM_001100109, exon 1 of 16) 386 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000112449 Srp54b - signal recognition particle 54B protein-coding common_peak1_98_81_-0.0167053975661151_6.34919930583503_0.301029995664044-2 chr4 66827473 66828546 + 0.301029995664044 NA intron (NM_021297, intron 1 of 2) intron (NM_021297, intron 1 of 2) 458 NM_021297 21898 Mm.38049 NM_021297 ENSMUSG00000039005 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 protein-coding common_peak2_135_111_-0.0116340238676402_6.80153791012378_0.301029995664044-2 chr4 43397878 43398755 + 0.301029995664044 NA intron (NM_001037709, intron 1 of 11) intron (NM_001037709, intron 1 of 11) -8186 NM_199057 100213 Mm.235730 NM_199057 ENSMUSG00000035969 Rusc2 AI840675|mKIAA0375 RUN and SH3 domain containing 2 protein-coding common_peak1_67_56_-0.0301141364015338_5.81783294596397_0.301029995664038 chr4 44756694 44757282 + 0.301029995664038 NA intron (NM_138590, intron 1 of 8) CpG 429 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak1_67_56_-0.0301141364015338_5.81783294596397_0.301029995664038-2 chr6 115272127 115272624 + 0.301029995664038 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -20170 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding common_peak2_67_56_-0.0301141364015338_5.81783294596397_0.301029995664038 chr8 32287006 32287473 + 0.301029995664038 NA Intergenic Intergenic 135344 NR_046039 666589 Mm.367675 NR_046039 Gm8179 EG666589 predicted gene 8179 ncRNA common_peak2_128_105_-0.00789730169955583_6.72397180371342_0.301029995664031-2 chr8 121116278 121117404 + 0.301029995664031 NA exon (NM_013519, exon 1 of 1) exon (NM_013519, exon 1 of 1) 670 NM_013519 14234 Mm.14092 NM_013519 ENSMUSG00000046714 Foxc2 Fkh14|Hfhbf3|MFH-1|Mfh1 forkhead box C2 protein-coding common_peak2_128_105_-0.00789730169955583_6.72397180371342_0.301029995664031 chr8 11497048 11498180 + 0.301029995664031 NA promoter-TSS (NM_026995) promoter-TSS (NM_026995) 46 NM_026995 69225 Mm.64911 NM_026995 ENSMUSG00000031505 Naxd 0710008K08Rik|2810407E01Rik|Carkd NAD(P)HX dehydratase protein-coding common_peak1_260_212_-0.00518037396690563_7.73211943324239_0.301029995664031 chr8 11380525 11382423 + 0.301029995664031 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -68648 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_107_88_-0.0102415596394829_6.47061265114666_0.301029995664031 chr2 135677675 135679095 + 0.301029995664031 NA intron (NM_001355156, intron 1 of 37) intron (NM_001355156, intron 1 of 37) 18838 NM_001355156 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_106_88_-0.0235673939372392_6.46394973399778_0.301029995664031 chr9 20459346 20460436 + 0.301029995664031 NA intron (NM_011753, intron 1 of 9) CpG 269 NM_011753 22688 Mm.107441 NM_011753 ENSMUSG00000063108 Zfp26 5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52 zinc finger protein 26 protein-coding common_peak1_107_88_-0.0102415596394829_6.47061265114666_0.301029995664031 chr3 58691315 58692426 + 0.301029995664031 NA promoter-TSS (NR_045167) promoter-TSS (NR_045167) 518 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding common_peak1_69_57_-0.0136799821550131_5.85114100405007_0.301029995664025 chr16 15594021 15594707 + 0.301029995664025 NA intron (NM_001159351, intron 1 of 2) CpG 154 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak1_68_57_-0.0342920911038629_5.84083494957564_0.301029995664025-2 chr2 26132615 26133531 + 0.301029995664025 NA Intergenic Intergenic 6470 NM_001256522 109299 Mm.389259 NM_001256521 Tmem250-ps AI551216|C330006A16Rik transmembrane protein 250, pseudogene protein-coding common_peak1_69_57_-0.0136799821550131_5.85114100405007_0.301029995664025-2 chr4 45319991 45320881 + 0.301029995664025 NA exon (NM_025513, exon 1 of 4) exon (NM_025513, exon 1 of 4) 167 NM_025513 66362 Mm.275788 NM_025513 ENSMUSG00000028322 Exosc3 2310005D06Rik|AI593501|Rrp40 exosome component 3 protein-coding common_peak1_68_57_-0.0342920911038629_5.84083494957564_0.301029995664025 chr19 40477797 40478347 + 0.301029995664025 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -26674 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_69_57_-0.0136799821550131_5.85114100405007_0.301029995664025-2 chr2 167774506 167775498 + 0.301029995664025 NA Intergenic Intergenic 83825 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_69_57_-0.0136799821550131_5.85114100405007_0.301029995664025 chr13 91460218 91460729 + 0.301029995664025 NA promoter-TSS (NM_024186) promoter-TSS (NM_024186) -624 NM_024272 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak2_69_57_-0.0136799821550131_5.85114100405007_0.301029995664025-3 chr3 95667341 95668033 + 0.301029995664025 NA Intergenic Tigger5|DNA|TcMar-Tigger 8966 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_83_69_-0.0238033004988303_6.11738136669555_0.301029995664019 chr4 82504104 82505152 + 0.301029995664019 NA intron (NM_001286131, intron 1 of 9) CpG 1151 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak1_119_98_-0.0129340340269684_6.62288960306613_0.301029995664019-2 chrX 164013656 164015144 + 0.301029995664019 NA intron (NM_181315, intron 2 of 7) B1_Mur4|SINE|Alu 13610 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_63_53_-0.0389574170921607_5.73540879361739_0.301029995664019 chr10 77004099 77005123 + 0.301029995664019 NA Intergenic Intergenic -7384 NR_045882 100038479 Mm.387034 NR_045882 ENSMUSG00000074919 Gm10787 - predicted gene 10787 ncRNA common_peak1_121_100_-0.0181103930221624_6.64915628624071_0.301029995664019 chr15 88732801 88733997 + 0.301029995664019 NA intron (NM_001033274, intron 1 of 12) intron (NM_001033274, intron 1 of 12) 820 NM_001033274 223770 Mm.254438 NM_001033274 ENSMUSG00000022387 Brd1 1110059H06Rik|AI316859|mKIAA4191 bromodomain containing 1 protein-coding common_peak1_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019-5 chr7 144685010 144685698 + 0.301029995664019 NA intron (NM_178642, intron 1 of 25) intron (NM_178642, intron 1 of 25) 53238 NM_178642 101772 Mm.26700 NM_178642 ENSMUSG00000031075 Ano1 Tmem16a anoctamin 1, calcium activated chloride channel protein-coding common_peak2_83_69_-0.0238033004988303_6.11738136669555_0.301029995664019 chr7 135610033 135610613 + 0.301029995664019 NA intron (NM_001316679, intron 1 of 19) intron (NM_001316679, intron 1 of 19) 4495 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_82_68_-0.020200835887251_6.09842403883454_0.301029995664019 chr18 36496550 36497878 + 0.301029995664019 NA Intergenic Intergenic 18591 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak2_82_68_-0.020200835887251_6.09842403883454_0.301029995664019-2 chr18 60560741 60561388 + 0.301029995664019 NA intron (NM_025776, intron 1 of 10) CpG 278 NM_025776 66810 Mm.275106 NM_025776 ENSMUSG00000024604 Rbm22 8430430L24Rik RNA binding motif protein 22 protein-coding common_peak1_119_98_-0.0129340340269684_6.62288960306613_0.301029995664019 chr2 151972453 151974161 + 0.301029995664019 NA promoter-TSS (NM_001289151) promoter-TSS (NM_001289151) 87 NM_001289151 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_82_68_-0.020200835887251_6.09842403883454_0.301029995664019 chr12 100110145 100110943 + 0.301029995664019 NA Intergenic CpG -1787 NM_008947 19179 Mm.157105 NM_008947 ENSMUSG00000021178 Psmc1 AI325227|P26s4|Rpt2/S4|S4|rpt2 protease (prosome, macropain) 26S subunit, ATPase 1 protein-coding common_peak1_63_53_-0.0389574170921607_5.73540879361739_0.301029995664019-2 chr10 128377173 128378001 + 0.301029995664019 NA exon (NM_172790, exon 2 of 28) exon (NM_172790, exon 2 of 28) 463 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding common_peak2_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019-2 chr10 80432702 80433545 + 0.301029995664019 NA intron (NM_001164153, intron 1 of 18) CpG 530 NM_001164150 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding common_peak2_119_98_-0.0129340340269684_6.62288960306613_0.301029995664019 chr7 145105342 145106609 + 0.301029995664019 NA Intergenic Intergenic 102144 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_83_69_-0.0238033004988303_6.11738136669555_0.301029995664019-2 chr8 103230660 103231695 + 0.301029995664019 NA Intergenic Intergenic 116357 NR_036588 69794 Mm.396139 NR_036588 ENSMUSG00000110340 1600027J07Rik - RIKEN cDNA 1600027J07 gene ncRNA common_peak2_157_129_-0.0118551263264219_7.01644024986524_0.301029995664019 chr19 30030549 30031827 + 0.301029995664019 NA intron (NM_144873, intron 1 of 15) CpG 675 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak1_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019 chr12 27338681 27339551 + 0.301029995664019 NA 3' UTR (NM_009234, exon 1 of 1) 3' UTR (NM_009234, exon 1 of 1) 3602 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak2_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019 chr1 127239284 127239955 + 0.301029995664019 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 34633 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_83_69_-0.0238033004988303_6.11738136669555_0.301029995664019-2 chr5 130170756 130171634 + 0.301029995664019 NA promoter-TSS (NM_001199059) promoter-TSS (NM_001199059) -624 NM_001199059 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_63_53_-0.0389574170921607_5.73540879361739_0.301029995664019 chr8 64523026 64523425 + 0.301029995664019 NA Intergenic Intergenic -8784 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA common_peak1_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019-2 chr2 152817347 152818235 + 0.301029995664019 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 10698 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019-3 chr3 64996388 64997480 + 0.301029995664019 NA intron (NM_001357358, intron 1 of 13) intron (NM_001357358, intron 1 of 13) 47722 NM_001357358 16497 Mm.316402 NM_010597 ENSMUSG00000027827 Kcnab1 Akr8a8|Kvbeta1.1|mKv(beta)1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 protein-coding common_peak1_82_68_-0.020200835887251_6.09842403883454_0.301029995664019-3 chr8 84020815 84021680 + 0.301029995664019 NA promoter-TSS (NM_028877) promoter-TSS (NM_028877) -227 NM_028877 74337 Mm.250943 NM_028877 ENSMUSG00000047986 Palm3 4432412L15Rik|AL024300 paralemmin 3 protein-coding common_peak2_82_68_-0.020200835887251_6.09842403883454_0.301029995664019-3 chr9 55149508 55150350 + 0.301029995664019 NA promoter-TSS (NM_001346658) promoter-TSS (NM_001346658) -154 NM_001346658 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak1_82_68_-0.020200835887251_6.09842403883454_0.301029995664019-2 chr3 144604570 144605739 + 0.301029995664019 NA Intergenic Intergenic 34727 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_64_53_-0.0167474085277206_5.74651379789961_0.301029995664019-4 chr5 65434771 65435669 + 0.301029995664019 NA intron (NM_009466, intron 1 of 11) intron (NM_009466, intron 1 of 11) 622 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak1_84_70_-0.0273143429875962_6.13608994801088_0.301029995664013 chr13 6192239 6193103 + 0.301029995664013 NA Intergenic B4|SINE|B4 331182 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak2_84_70_-0.0273143429875962_6.13608994801088_0.301029995664013 chr15 79516505 79517269 + 0.301029995664013 NA intron (NM_134090, intron 1 of 4) intron (NM_134090, intron 1 of 4) 479 NM_134090 105785 Mm.298199 NM_134090 ENSMUSG00000010830 Kdelr3 AI173274 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 protein-coding common_peak1_85_70_-0.0105595688684934_6.14446733507044_0.301029995664013 chr5 147077532 147078302 + 0.301029995664013 NA intron (NM_181730, intron 1 of 2) intron (NM_181730, intron 1 of 2) 571 NM_009087 20018 Mm.317557 NM_009087 ENSMUSG00000029642 Polr1d 1110003G10Rik|AC19|RPA16|Rpo1-3 polymerase (RNA) I polypeptide D protein-coding common_peak2_84_70_-0.0273143429875962_6.13608994801088_0.301029995664013-2 chr3 144604512 144605782 + 0.301029995664013 NA Intergenic Intergenic 34720 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_84_70_-0.0273143429875962_6.13608994801088_0.301029995664013-2 chr13 23746792 23747880 + 0.301029995664013 NA TTS (NM_175664) TTS (NM_175664) 602 NM_175664 319178 Mm.390567 NM_175664 ENSMUSG00000075031 Hist1h2bb H2b-143 histone cluster 1, H2bb protein-coding common_peak2_85_70_-0.0105595688684934_6.14446733507044_0.301029995664013 chr15 61240784 61241720 + 0.301029995664013 NA Intergenic Intergenic -319982 NM_001081067 117586 Mm.291499 NM_001081067 ENSMUSG00000022347 A1bg C44 alpha-1-B glycoprotein protein-coding common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-2 chr15 11523772 11524445 + 0.30102999566401 NA Intergenic Intergenic -124450 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-5 chr9 109058883 109059519 + 0.30102999566401 NA promoter-TSS (NM_001012236) promoter-TSS (NM_001012236) 50 NM_001012236 22040 Mm.439964 NM_011637 ENSMUSG00000049734 Trex1 AU041952 three prime repair exonuclease 1 protein-coding common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401 chr11 17257593 17257994 + 0.30102999566401 NA 5' UTR (NM_001330649, exon 1 of 5) 5' UTR (NM_001330649, exon 1 of 5) 105 NM_001330649 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-3 chr2 127332745 127333238 + 0.30102999566401 NA Intergenic Intergenic -3168 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak2_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-4 chr7 133637695 133638166 + 0.30102999566401 NA intron (NM_178115, intron 1 of 24) CpG 255 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-4 chr6 88519063 88519535 + 0.30102999566401 NA promoter-TSS (NM_016906) promoter-TSS (NM_016906) -499 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak2_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-3 chr7 112333056 112333960 + 0.30102999566401 NA intron (NM_177282, intron 17 of 19) intron (NM_177282, intron 17 of 19) -34800 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak2_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-2 chr18 60671871 60672605 + 0.30102999566401 NA TTS (NR_045401) TTS (NR_045401) 8828 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-6 chr6 145249628 145250546 + 0.30102999566401 NA promoter-TSS (NR_045598) promoter-TSS (NR_045598) 144 NM_021284 16653 Mm.383182 NM_021284 ENSMUSG00000030265 Kras AI929937|K-Ras|K-Ras 2|K-ras|Ki-ras|Kras-2|Kras2|c-K-ras|c-Ki-ras|p21B|ras Kirsten rat sarcoma viral oncogene homolog protein-coding common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-5 chr6 129235408 129236235 + 0.30102999566401 NA intron (NR_040268, intron 2 of 3) intron (NR_040268, intron 2 of 3) 2224 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_50_42_-0.0355982951381915_5.408465607133_0.30102999566401 chr1 135770373 135770933 + 0.30102999566401 NA Intergenic Intergenic 4568 NM_013750 27280 Mm.34346 NM_013750 ENSMUSG00000041801 Phlda3 Tih1 pleckstrin homology like domain, family A, member 3 protein-coding common_peak1_50_42_-0.0355982951381915_5.408465607133_0.30102999566401-7 chr7 112679507 112679996 + 0.30102999566401 NA intron (NM_001166584, intron 1 of 13) CpG 431 NM_009346 21676 Mm.24685 NM_009346 ENSMUSG00000055320 Tead1 2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1 TEA domain family member 1 protein-coding common_peak2_112_92_-0.00883610944777935_6.53474075638414_0.301029995664007 chr1 92180629 92181673 + 0.301029995664007 NA promoter-TSS (NM_207225) promoter-TSS (NM_207225) -810 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_91_75_-0.0121291912205743_6.2418629178333_0.301029995664007-2 chr6 88044599 88045209 + 0.301029995664007 NA intron (NM_001293652, intron 1 of 7) CpG 113 NM_001293653 19349 Mm.333233 NM_009005 ENSMUSG00000079477 Rab7 Rab7a RAB7, member RAS oncogene family protein-coding common_peak2_320_261_-0.00747634185408153_8.02968483061041_0.301029995664007 chr15 13171640 13174384 + 0.301029995664007 NA intron (NM_007666, intron 1 of 11) intron (NM_007666, intron 1 of 11) 663 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_112_92_-0.00883610944777935_6.53474075638414_0.301029995664007-2 chr10 108378273 108379436 + 0.301029995664007 NA intron (NM_054056, intron 2 of 6) intron (NM_054056, intron 2 of 6) 46665 NM_054056 114774 Mm.391419 NM_054056 ENSMUSG00000035873 Pawr 2310001G03Rik|PAR4|Par-4 PRKC, apoptosis, WT1, regulator protein-coding common_peak2_90_75_-0.0277852689875866_6.23403487894979_0.301029995664007-2 chr6 140621107 140621757 + 0.301029995664007 NA Intergenic Intergenic -1231 NM_178803 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_162_133_-0.0109462007333478_7.0606160900911_0.301029995664007 chr10 58446236 58447623 + 0.301029995664007 NA promoter-TSS (NM_011240) promoter-TSS (NM_011240) 77 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak2_90_75_-0.0277852689875866_6.23403487894979_0.301029995664007 chr6 108537380 108538264 + 0.301029995664007 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 48079 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_91_75_-0.0121291912205743_6.2418629178333_0.301029995664007 chr18 75464952 75465852 + 0.301029995664007 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -49243 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak1_90_75_-0.0277852689875866_6.23403487894979_0.301029995664007 chr18 36410615 36411343 + 0.301029995664007 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 43516 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_112_92_-0.00883610944777935_6.53474075638414_0.301029995664007-3 chr3 107695725 107696542 + 0.301029995664007 NA promoter-TSS (NM_001357112) promoter-TSS (NM_001357112) -77 NM_001357112 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak2_167_137_-0.010099719905277_7.10347459682553_0.301029995664007 chr3 87971293 87973023 + 0.301029995664007 NA intron (NM_016701, intron 1 of 3) intron (NM_016701, intron 1 of 3) 1065 NM_016701 18008 Mm.331129 NM_016701 ENSMUSG00000004891 Nes AA166324|C78523|ESTM46|Ifaprc2|Marc2|RC2 nestin protein-coding common_peak1_91_75_-0.0121291912205743_6.2418629178333_0.301029995664007 chr5 139735145 139736302 + 0.301029995664007 NA intron (NM_174850, intron 1 of 16) intron (NM_174850, intron 1 of 16) 610 NM_174850 231830 Mm.240510 NM_174850 ENSMUSG00000036718 Micall2 A930021H16Rik|JRAB|MICAL-L2|mFLJ00139 MICAL-like 2 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-2 chr11 88180977 88181201 + 0.301029995664001 NA intron (NM_001172099, intron 2 of 9) intron (NM_001172099, intron 2 of 9) 11524 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-2 chr15 85879386 85880134 + 0.301029995664001 NA intron (NM_028063, intron 1 of 10) intron (NM_028063, intron 1 of 10) 433 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak2_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-3 chr18 36735113 36735616 + 0.301029995664001 NA intron (NM_028036, intron 1 of 11) CpG 294 NM_028036 71983 Mm.135188 NM_028036 ENSMUSG00000006850 Tmco6 2410015B03Rik transmembrane and coiled-coil domains 6 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001 chr10 24387902 24388287 + 0.301029995664001 NA Intergenic Intergenic 164577 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-3 chr13 113340973 113341276 + 0.301029995664001 NA Intergenic Intergenic 131465 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak1_57_48_-0.0397968227379417_5.59481143274624_0.301029995664001-3 chr7 127375508 127376044 + 0.301029995664001 NA exon (NM_175560, exon 1 of 3) exon (NM_175560, exon 1 of 3) 274 NM_175560 269997 Mm.221270 NM_175560 ENSMUSG00000054381 Zfp747 6430604K15Rik zinc finger protein 747 protein-coding common_peak1_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001 chr1 36557035 36557653 + 0.301029995664001 NA intron (NM_001304330, intron 1 of 15) CpG 213 NM_001304330 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak1_95_79_-0.0251624075886001_6.30934689109306_0.301029995664001 chr9 63744959 63746181 + 0.301029995664001 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 12424 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_95_79_-0.0251624075886001_6.30934689109306_0.301029995664001-2 chr10 84396164 84397176 + 0.301029995664001 NA intron (NM_001004363, intron 2 of 6) intron (NM_001004363, intron 2 of 6) 43801 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-7 chr17 46327613 46328033 + 0.301029995664001 NA exon (NM_170680, exon 1 of 21) exon (NM_170680, exon 1 of 21) 200 NM_001347396 224814 Mm.76543 NM_145140 ENSMUSG00000032842 Abcc10 Mrp7|mFLJ00002 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 protein-coding common_peak2_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-4 chr2 167867160 167867785 + 0.301029995664001 NA Intergenic Intergenic -64855 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-2 chr13 63815366 63815944 + 0.301029995664001 NA intron (NM_001361124, intron 1 of 9) CpG 415 NM_023507 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-8 chr19 9060868 9061334 + 0.301029995664001 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 26855 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-11 chr4 95758985 95759462 + 0.301029995664001 NA intron (NM_029347, intron 7 of 10) intron (NM_029347, intron 7 of 10) 179802 NM_029347 75578 Mm.276098 NM_029347 ENSMUSG00000028573 Fggy 2310009E04Rik FGGY carbohydrate kinase domain containing protein-coding common_peak2_57_48_-0.0397968227379417_5.59481143274624_0.301029995664001 chr2 113373613 113374658 + 0.301029995664001 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 46399 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-5 chr16 18289481 18290059 + 0.301029995664001 NA promoter-TSS (NM_033324) promoter-TSS (NM_033324) -602 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DGCR8, microprocessor complex subunit protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-9 chr9 95749786 95750306 + 0.301029995664001 NA 5' UTR (NM_001311123, exon 1 of 12) 5' UTR (NM_001311123, exon 1 of 12) 312 NM_001311123 22063 Mm.149633 NM_011643 ENSMUSG00000032839 Trpc1 Mtrp1|Trp1|Trrp1 transient receptor potential cation channel, subfamily C, member 1 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-10 chr4 62733188 62733539 + 0.301029995664001 NA Intergenic Intergenic 59389 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_57_48_-0.0397968227379417_5.59481143274624_0.301029995664001-3 chr6 100826812 100827590 + 0.301029995664001 NA Intergenic Intergenic -6437 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-5 chr4 132270158 132270499 + 0.301029995664001 NA promoter-TSS (NR_002865) promoter-TSS (NR_002865) -142 NR_002865 353373 Mm.424675 NR_002865 Rnu11 MBII-407|Mirn801|mir-801|mmu-mir-801 U11 small nuclear RNA snRNA common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-6 chr5 123973709 123974296 + 0.301029995664001 NA intron (NM_145070, intron 1 of 31) CpG 374 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-2 chr13 43303717 43304123 + 0.301029995664001 NA 5' UTR (NM_001033399, exon 1 of 2) 5' UTR (NM_001033399, exon 1 of 2) 252 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-12 chr7 84362400 84362767 + 0.301029995664001 NA intron (NM_007488, intron 1 of 18) intron (NM_007488, intron 1 of 18) 47455 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001 chr10 93749452 93750264 + 0.301029995664001 NA Intergenic Intergenic -66536 NR_038017 100504069 Mm.391412 NR_038017 ENSMUSG00000085723 Gm15915 - predicted gene 15915 ncRNA common_peak2_95_79_-0.0251624075886001_6.30934689109306_0.301029995664001 chr1 187215326 187216051 + 0.301029995664001 NA promoter-TSS (NM_028848) promoter-TSS (NM_028848) -55 NM_001357645 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak2_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-5 chr3 31016396 31016698 + 0.301029995664001 NA intron (NM_008857, intron 1 of 17) intron (NM_008857, intron 1 of 17) 20776 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-6 chr16 35509113 35509628 + 0.301029995664001 NA promoter-TSS (NR_040481) promoter-TSS (NR_040481) 49 NR_040481 69768 Mm.396136 NR_040481 ENSMUSG00000099429 1600019K03Rik - RIKEN cDNA 1600019K03 gene ncRNA common_peak1_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-3 chr7 127016367 127017185 + 0.301029995664001 NA TTS (NM_001102563) TTS (NM_001102563) 576 NM_030240 67278 Mm.345385 NM_030240 ENSMUSG00000107068 Pagr1a 2900092E17Rik|C77040|PA1|PAGR1 PAXIP1 associated glutamate rich protein 1A protein-coding common_peak2_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-6 chr3 155092807 155093279 + 0.301029995664001 NA promoter-TSS (NM_028938) promoter-TSS (NM_028938) 335 NM_029330 75540 Mm.35218 NM_029330 ENSMUSG00000053870 Fpgt 1700016E03Rik fucose-1-phosphate guanylyltransferase protein-coding common_peak2_57_48_-0.0397968227379417_5.59481143274624_0.301029995664001-2 chr4 88787942 88788414 + 0.301029995664001 NA promoter-TSS (NM_001161609).4 promoter-TSS (NM_001161609).4 201 NM_001098840 545650 Mm.473677 NM_001098840 ENSMUSG00000100234 Gm13277 - predicted gene 13277 protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-7 chr6 145973140 145973768 + 0.301029995664001 NA Intergenic Intergenic 39332 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_96_79_-0.0103175404762847_6.31676932464922_0.301029995664001 chr13 24565711 24566842 + 0.301029995664001 NA Intergenic Intergenic -15913 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Ripor2 Fam65b RHO family interacting cell polarization regulator 2 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-3 chr12 54738603 54738897 + 0.301029995664001 NA Intergenic Intergenic -42856 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_97_80_-0.0135468390918136_6.33307658333872_0.301029995664001 chr9 119980570 119981359 + 0.301029995664001 NA intron (NM_153287, intron 1 of 4) intron (NM_153287, intron 1 of 4) 2059 NM_001357560 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak1_57_48_-0.0397968227379417_5.59481143274624_0.301029995664001 chr17 25188529 25189148 + 0.301029995664001 NA promoter-TSS (NM_001290736) promoter-TSS (NM_001290736) -76 NM_001290736 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-8 chr8 111725465 111725664 + 0.301029995664001 NA intron (NM_009954, intron 1 of 6) intron (NM_009954, intron 1 of 6) 6572 NM_001198839 12927 Mm.3758 NM_009954 ENSMUSG00000031955 Bcar1 AI385681|Cas|Crkas breast cancer anti-estrogen resistance 1 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-4 chr15 79324181 79324493 + 0.301029995664001 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 4034 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding unique_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001 chr11 87470890 87471354 + 0.301029995664001 NA intron (NM_001199293, intron 2 of 30) CpG 43531 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001 chr1 59913203 59913688 + 0.301029995664001 NA exon (NM_001037725, exon 1 of 8) exon (NM_001037725, exon 1 of 8) 439 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak1_57_48_-0.0397968227379417_5.59481143274624_0.301029995664001-2 chr17 28177349 28177879 + 0.301029995664001 NA intron (NM_001357995, intron 1 of 13) CpG 196 NM_172617 224656 Mm.267359 NM_172617 ENSMUSG00000024220 Zfp523 2810027J07|BC025615|Znf76 zinc finger protein 523 protein-coding common_peak1_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-4 chr2 27329689 27330587 + 0.301029995664001 NA intron (NR_133905, intron 2 of 29) intron (NR_133905, intron 2 of 29) -82835 NM_138665 192166 Mm.278467 NM_138665 ENSMUSG00000009614 Sardh - sarcosine dehydrogenase protein-coding common_peak2_58_48_-0.0153087587925285_5.60705546471894_0.301029995664001-2 chr17 74294850 74295483 + 0.301029995664001 NA promoter-TSS (NM_133771) promoter-TSS (NM_133771) -303 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak2_39_33_-0.044820877851909_5.06505240232439_0.301029995664001-9 chr2 27841982 27842681 + 0.301029995664001 NA Intergenic Intergenic -44094 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-9 chr8 22757031 22757431 + 0.301029995663997 NA promoter-TSS (NM_008872) promoter-TSS (NM_008872) -491 NM_008872 18791 Mm.154660 NM_008872 ENSMUSG00000031538 Plat AU020998|AW212668|D8Ertd2e|tPA plasminogen activator, tissue protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-8 chr7 142361868 142362420 + 0.301029995663997 NA intron (NM_001347541, intron 2 of 2) intron (NM_001347541, intron 2 of 2) 10115 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-3 chr11 74566821 74567212 + 0.301029995663997 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 23142 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-4 chr15 93275471 93276033 + 0.301029995663997 NA promoter-TSS (NM_001346785) promoter-TSS (NM_001346785) -573 NM_001346785 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-9 chr5 105799829 105800278 + 0.301029995663997 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -76515 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-4 chr15 80063285 80063607 + 0.301029995663997 NA Intergenic Intergenic 15133 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-6 chr4 11675968 11676526 + 0.301029995663997 NA Intergenic Intergenic -28200 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-6 chr19 4928494 4928847 + 0.301029995663997 NA promoter-TSS (NM_133803) promoter-TSS (NM_133803) -383 NM_133803 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324|DPP III dipeptidylpeptidase 3 protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-2 chr11 59891991 59892584 + 0.301029995663997 NA Intergenic Intergenic -29212 NR_130986 69854 Mm.57859 NR_130986 ENSMUSG00000085551 1810063I02Rik - RIKEN cDNA 1810063I02 gene ncRNA common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-7 chr4 35156938 35157511 + 0.301029995663997 NA intron (NM_178061, intron 1 of 3) CpG 260 NM_178061 214944 Mm.32968 NM_178061 ENSMUSG00000073910 Mob3b 8430436F23Rik|A430018A01Rik|Mobkl2b MOB kinase activator 3B protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-8 chr4 117836452 117837068 + 0.301029995663997 NA intron (NM_008135, intron 1 of 13) intron (NM_008135, intron 1 of 13) 1502 NM_008135 14664 Mm.244549 NM_008135 ENSMUSG00000028542 Slc6a9 Glyt-1|Glyt1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-3 chr13 112926828 112927339 + 0.301029995663997 NA promoter-TSS (NM_172594) promoter-TSS (NM_172594) 297 NM_028151 72198 Mm.291029 NM_028151 ENSMUSG00000016018 Skiv2l2 2610528A15Rik|Mtrex|mKIAA0052 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997 chr1 87181165 87181719 + 0.301029995663997 NA Intergenic Intergenic -1872 NM_027084 69453 Mm.84618 NM_027084 ENSMUSG00000036480 Prss56 1700027L20Rik protease, serine 56 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-11 chr8 95137294 95137671 + 0.301029995663997 NA intron (NM_010631, intron 2 of 19) intron (NM_010631, intron 2 of 19) 5058 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding unique_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997 chr4 127349861 127350505 + 0.301029995663997 NA TTS (NM_008127) TTS (NM_008127) 3898 NM_008127 14621 Mm.56906 NM_008127 ENSMUSG00000046623 Gjb4 Cnx30.3|Cx30.3|Gjb-4 gap junction protein, beta 4 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-5 chr17 35879866 35880364 + 0.301029995663997 NA exon (NM_026987, exon 1 of 20) exon (NM_026987, exon 1 of 20) 337 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-10 chr9 92273848 92274339 + 0.301029995663997 NA Intergenic Intergenic -1509 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-5 chr17 47294364 47294672 + 0.301029995663997 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 64288 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-2 chr13 98680725 98681290 + 0.301029995663997 NA Intergenic Intergenic 13824 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-10 chr8 84183310 84183854 + 0.301029995663997 NA Intergenic Intergenic -4621 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997-7 chr4 139601843 139602687 + 0.301029995663997 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) -20629 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak1_38_32_-0.0380203426758845_5.02538394802051_0.301029995663997 chr11 6415326 6415665 + 0.301029995663997 NA promoter-TSS (NM_008907) promoter-TSS (NM_008907) -375 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak2_72_60_-0.0263219019969601_5.91757638656441_0.301029995663994-2 chr14 78536398 78537370 + 0.301029995663994 NA promoter-TSS (NM_001164503) promoter-TSS (NM_001164503) -24 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-4 chr15 62078830 62079274 + 0.301029995663994 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 39795 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 Pvt1 oncogene ncRNA common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-3 chr10 80024471 80024900 + 0.301029995663994 NA exon (NM_001142701, exon 11 of 23) exon (NM_001142701, exon 11 of 23) 5010 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Arhgap45 6330406L22Rik|AW539505|Ha-1|Hmha1 Rho GTPase activating protein 45 protein-coding common_peak2_141_116_-0.0127989574499168_6.86396524085845_0.301029995663994 chr15 38709106 38710192 + 0.301029995663994 NA Intergenic Intergenic 18867 NR_131206 105463124 Mm.432448 NR_131206 ENSMUSG00000115620 Gm45924 Borg predicted gene, 45924 ncRNA common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-8 chr6 91473752 91474300 + 0.301029995663994 NA promoter-TSS (NM_133928) promoter-TSS (NM_133928) 275 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-3 chr12 113013924 113014253 + 0.301029995663994 NA promoter-TSS (NM_001291444) promoter-TSS (NM_001291444) -420 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-5 chr16 25066931 25067241 + 0.301029995663994 NA non-coding (NR_040374, exon 3 of 3) non-coding (NR_040374, exon 3 of 3) 7447 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_72_60_-0.0263219019969601_5.91757638656441_0.301029995663994-3 chr17 29095668 29096542 + 0.301029995663994 NA intron (NM_007669, intron 1 of 2) B1_Mur2|SINE|Alu 2336 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-13 chr5 151316084 151316455 + 0.301029995663994 NA Intergenic Intergenic -52406 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-7 chr18 60745979 60746337 + 0.301029995663994 NA intron (NM_001348146, intron 1 of 6) intron (NM_001348146, intron 1 of 6) 588 NM_001348101 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak1_100_83_-0.0228195235213473_6.38090766101809_0.301029995663994 chr9 74952496 74953802 + 0.301029995663994 NA promoter-TSS (NM_001113283) promoter-TSS (NM_001113283) 96 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-7 chr5 92819416 92820130 + 0.301029995663994 NA intron (NM_001077595, intron 1 of 9) ID4|SINE|ID 10391 NM_001077595 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-4 chr13 67609086 67609665 + 0.301029995663994 NA intron (NM_001163246, intron 1 of 3) intron (NM_001163246, intron 1 of 3) 332 NM_001163246 100416706 Mm.478045 NM_001163246 ENSMUSG00000058093 Zfp729b AA987127 zinc finger protein 729b protein-coding common_peak1_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-2 chr8 121653258 121653812 + 0.301029995663994 NA Intergenic Intergenic -1602 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-6 chr19 43512357 43512828 + 0.301029995663994 NA intron (NM_010324, intron 2 of 8) intron (NM_010324, intron 2 of 8) 12013 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-8 chr19 16254136 16254599 + 0.301029995663994 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 60637 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak2_100_83_-0.0228195235213473_6.38090766101809_0.301029995663994 chr7 109575855 109577006 + 0.301029995663994 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 40138 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_115_95_-0.0171044589171343_6.57641027126259_0.301029995663994-2 chr8 123477936 123479009 + 0.301029995663994 NA intron (NR_028260, intron 1 of 15) intron (NR_028260, intron 1 of 15) 610 NR_028260 114896 Mm.287475 NM_054070 ENSMUSG00000031967 Afg3l1 1700047G05Rik|3110061K15Rik AFG3-like AAA ATPase 1 protein-coding common_peak2_72_60_-0.0263219019969601_5.91757638656441_0.301029995663994-4 chr4 138216170 138216894 + 0.301029995663994 NA promoter-TSS (NM_001122896) promoter-TSS (NM_001122896) -80 NM_001122896 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-10 chr9 110408410 110408775 + 0.301029995663994 NA promoter-TSS (NM_001081043) promoter-TSS (NM_001081043) -382 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-5 chr10 127666369 127666799 + 0.301029995663994 NA promoter-TSS (NR_045171) promoter-TSS (NR_045171) 119 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-9 chr19 55621038 55621403 + 0.301029995663994 NA intron (NM_001360431, intron 8 of 8) intron (NM_001360431, intron 8 of 8) 80984 NR_045318 77594 Mm.329924 NR_045318 ENSMUSG00000097632 4930552P12Rik - RIKEN cDNA 4930552P12 gene ncRNA common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-11 chr3 87908144 87908521 + 0.301029995663994 NA intron (NM_001331051, intron 1 of 6) intron (NM_001331051, intron 1 of 6) 1482 NM_001331052 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-5 chr15 79773965 79774403 + 0.301029995663994 NA intron (NM_017470, intron 1 of 3) intron (NM_017470, intron 1 of 3) 283 NM_017470 54152 Mm.288159 NM_017470 ENSMUSG00000022420 Dnal4 D15Ertd424e|Dnalc4 dynein, axonemal, light chain 4 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-6 chr16 45076654 45076935 + 0.301029995663994 NA Intergenic Intergenic -17217 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994 chr1 86471125 86471438 + 0.301029995663994 NA Intergenic Intergenic 44952 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 Tex44 1700019O17Rik testis expressed 44 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-6 chr11 88203786 88204181 + 0.301029995663994 NA promoter-TSS (NR_111902) promoter-TSS (NR_111902) -405 NM_024174 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak1_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994 chr5 91618085 91618979 + 0.301029995663994 NA intron (NM_145562, intron 3 of 3) L2a|LINE|L2 100832 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-12 chr4 40777498 40777747 + 0.301029995663994 NA Intergenic Intergenic -19737 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak2_73_61_-0.030290548902677_5.93905103593554_0.301029995663994-2 chr16 17759672 17760296 + 0.301029995663994 NA intron (NM_145479, intron 1 of 6) CpG 363 NM_001359068 224023 Mm.282807 NM_145479 ENSMUSG00000022750 Klhl22 2610318I18Rik|Kelchl kelch-like 22 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994 chr1 46066739 46067060 + 0.301029995663994 NA intron (NM_001160386, intron 1 of 65) intron (NM_001160386, intron 1 of 65) 161 NM_001160386 227058 Mm.296880 NM_001160386 ENSMUSG00000041144 Dnah7b Dnahc7b|Gm107 dynein, axonemal, heavy chain 7B protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-14 chr8 25075228 25075542 + 0.301029995663994 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 26426 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-3 chr15 10890617 10890889 + 0.301029995663994 NA Intergenic Intergenic -61579 NM_030888 81799 Mm.280158 NM_030888 ENSMUSG00000058914 C1qtnf3 2310005P21Rik|CORS-26|CORS26|CTRP3|Corcs|Cors C1q and tumor necrosis factor related protein 3 protein-coding unique_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-2 chr8 86855023 86855419 + 0.301029995663994 NA intron (NM_030563, intron 2 of 6) intron (NM_030563, intron 2 of 6) 30037 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-4 chr10 80115174 80115415 + 0.301029995663994 NA promoter-TSS (NM_011492) promoter-TSS (NM_011492) -509 NM_001301853 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak1_73_61_-0.030290548902677_5.93905103593554_0.301029995663994 chr3 25143564 25144463 + 0.301029995663994 NA Intergenic CpG -360007 NM_001326288 635702 Mm.448351 NM_001326288 ENSMUSG00000102758 Naaladl2 2810043G22Rik|EG635702|Gm1021 N-acetylated alpha-linked acidic dipeptidase-like 2 protein-coding common_peak2_72_60_-0.0263219019969601_5.91757638656441_0.301029995663994 chr1 193567794 193568652 + 0.301029995663994 NA Intergenic Intergenic -60693 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak1_115_95_-0.0171044589171343_6.57641027126259_0.301029995663994 chr19 45047186 45048080 + 0.301029995663994 NA promoter-TSS (NM_001178013) promoter-TSS (NM_001178013) 57 NM_001362381 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-7 chr15 100403542 100403875 + 0.301029995663994 NA intron (NM_008732, intron 9 of 16) intron (NM_008732, intron 9 of 16) 19347 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding unique_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994 chr16 8666246 8666504 + 0.301029995663994 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 5778 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak1_73_61_-0.030290548902677_5.93905103593554_0.301029995663994-2 chr3 54807150 54808176 + 0.301029995663994 NA exon (NM_133231, exon 1 of 3) exon (NM_133231, exon 1 of 3) 128 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding common_peak2_101_83_-0.00870594278809911_6.38796445138471_0.301029995663994 chr1 63176460 63177497 + 0.301029995663994 NA promoter-TSS (NM_001160039) promoter-TSS (NM_001160039) 147 NM_018796 55949 Mm.2718 NM_018796 ENSMUSG00000025967 Eef1b2 2810017J07Rik|Eef1b eukaryotic translation elongation factor 1 beta 2 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-2 chr10 59942885 59943337 + 0.301029995663994 NA Intergenic Intergenic 8659 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-8 chr16 26400822 26401096 + 0.301029995663994 NA Intergenic Intergenic -29120 NM_016674 12737 Mm.289441 NM_016674 ENSMUSG00000022512 Cldn1 AI596271 claudin 1 protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-10 chr2 31769668 31769980 + 0.301029995663994 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 9651 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994 chr1 132341595 132342358 + 0.301029995663994 NA Intergenic Intergenic 25851 NM_028778 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-9 chr17 53587354 53587882 + 0.301029995663994 NA intron (NM_001190846, intron 1 of 17) intron (NM_001190846, intron 1 of 17) 3492 NM_001190846 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-2 chr11 4096919 4097316 + 0.301029995663994 NA TTS (NM_144520) TTS (NM_144520) -1686 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding common_peak2_73_61_-0.030290548902677_5.93905103593554_0.301029995663994 chr15 85569839 85570701 + 0.301029995663994 NA intron (NM_009528, intron 1 of 3) intron (NM_009528, intron 1 of 3) 7800 NM_001163634 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_45_38_-0.0425489170659938_5.26412776032925_0.301029995663994-2 chr15 6874043 6874582 + 0.301029995663994 NA promoter-TSS (NM_011019) promoter-TSS (NM_011019) 1 NM_011019 18414 Mm.10760 NM_011019 ENSMUSG00000022146 Osmr OSMRB oncostatin M receptor protein-coding common_peak2_26_22_-0.0439601255836104_4.50158189326521_0.301029995663994-15 chr8 41240816 41241090 + 0.301029995663994 NA intron (NM_023662, intron 1 of 37) intron (NM_023662, intron 1 of 37) 1194 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding common_peak2_177_145_-0.00857231205333431_7.18553840285335_0.301029995663994 chr6 113077589 113078772 + 0.301029995663994 NA promoter-TSS (NR_027008) promoter-TSS (NR_027008) 541 NM_028385 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak2_72_60_-0.0263219019969601_5.91757638656441_0.301029995663994-5 chr5 24165037 24166024 + 0.301029995663994 NA intron (NM_153092, intron 1 of 6) intron (NM_153092, intron 1 of 6) 567 NM_001346582 231042 Mm.45513 NM_153092 ENSMUSG00000048439 Nupl2 AV116043|CG1|NLP-1|Nlp1 nucleoporin like 2 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-11 chr5 122614050 122614488 + 0.301029995663988 NA 5' UTR (NM_001358917, exon 1 of 19) 5' UTR (NM_001358917, exon 1 of 19) 275 NM_001358919 12589 Mm.10125 NM_009879 ENSMUSG00000029469 Ift81 AW060663|Cdv-1|Cdv-1r|Cdv1 intraflagellar transport 81 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-14 chr3 18215107 18215381 + 0.301029995663988 NA intron (NM_007825, intron 1 of 5) intron (NM_007825, intron 1 of 5) 28094 NM_007825 13123 Mm.316000 NM_007825 ENSMUSG00000039519 Cyp7b1 AW261589|D3Ertd552e|hct-1 cytochrome P450, family 7, subfamily b, polypeptide 1 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988 chr1 12714924 12715324 + 0.301029995663988 NA intron (NM_001198566, intron 1 of 20) intron (NM_001198566, intron 1 of 20) -3421 NM_172294 240725 Mm.45563 NM_172294 ENSMUSG00000016918 Sulf1 AI467640|AW121680|mKIAA1077 sulfatase 1 protein-coding unique_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-2 chr4 88779151 88779571 + 0.301029995663988 NA promoter-TSS (NM_001161609).3 promoter-TSS (NM_001161609).3 -489 NM_001161609 545654 Mm.478784 NM_001161609 ENSMUSG00000095101 Gm13285 limitin predicted gene 13285 protein-coding common_peak1_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988-2 chr10 94036159 94036841 + 0.301029995663988 NA promoter-TSS (NM_001304572) promoter-TSS (NM_001304572) 499 NM_053072 13998 Mm.269596 NM_053072 ENSMUSG00000020021 Fgd6 AA123052|Etohd4|ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988 chr1 74016407 74016874 + 0.301029995663988 NA intron (NM_001289895, intron 3 of 32) intron (NM_001289895, intron 3 of 32) 107807 NM_027884 21961 Mm.309975 NM_027884 ENSMUSG00000055322 Tns1 1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns tensin 1 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-3 chr12 35193150 35193633 + 0.301029995663988 NA Intergenic Intergenic 1506 NR_030449 751520 NR_030449 ENSMUSG00000076253 Mir680-3 Mirn680-3 microRNA 680-3 ncRNA common_peak2_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988-5 chr6 128031872 128032777 + 0.301029995663988 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 111254 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-3 chr5 29844471 29845216 + 0.301029995663988 NA Intergenic Intergenic -108907 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-10 chr18 62531161 62531541 + 0.301029995663988 NA intron (NM_134136, intron 5 of 21) intron (NM_134136, intron 5 of 21) 12501 NM_001361091 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-5 chr13 41249843 41250109 + 0.301029995663988 NA 5' UTR (NM_001135577, exon 1 of 2) 5' UTR (NM_001135577, exon 1 of 2) 132 NM_001135577 108934 Mm.38578 NM_001135577 ENSMUSG00000091264 Smim13 2900036K02Rik small integral membrane protein 13 protein-coding common_peak2_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988-2 chr2 29619857 29620541 + 0.301029995663988 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 479 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-3 chr13 91650698 91651058 + 0.301029995663988 NA intron (NM_001360775, intron 5 of 16) intron (NM_001360775, intron 5 of 16) -90643 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-6 chr7 64391797 64392105 + 0.301029995663988 NA promoter-TSS (NM_001355124) promoter-TSS (NM_001355124) 285 NM_026483 67973 Mm.26973 NM_026483 ENSMUSG00000030521 Mphosph10 2810453H10Rik|5730405D16Rik|AI326008 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) protein-coding common_peak1_66_55_-0.0258019044172162_5.794453969849_0.301029995663988-2 chr8 124949476 124950016 + 0.301029995663988 NA promoter-TSS (NM_053207) promoter-TSS (NM_053207) -492 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-2 chr13 28918245 28918979 + 0.301029995663988 NA Intergenic Intergenic -33190 NR_045053 72518 Mm.37454 NR_045053 2610307P16Rik AI666457 RIKEN cDNA 2610307P16 gene ncRNA common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-7 chr5 108660219 108660784 + 0.301029995663988 NA exon (NM_199011, exon 1 of 23) exon (NM_199011, exon 1 of 23) 170 NM_172997 15932 Mm.358608 NM_008325 ENSMUSG00000033540 Idua 6030426D08 iduronidase, alpha-L- protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-17 chr9 110100553 110100990 + 0.301029995663988 NA intron (NM_001252682, intron 5 of 22) intron (NM_001252682, intron 5 of 22) 316 NM_001252683 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-10 chr7 74344869 74345180 + 0.301029995663988 NA intron (NM_001038643, intron 4 of 10) intron (NM_001038643, intron 4 of 10) 209756 NM_023908 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-4 chr1 180289377 180289979 + 0.301029995663988 NA Intergenic Intergenic -33378 NM_001128605 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-6 chr11 70667895 70668414 + 0.301029995663988 NA intron (NM_001167669, intron 1 of 6) intron (NM_001167669, intron 1 of 6) 1262 NM_172561 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding common_peak2_49_41_-0.030018560626452_5.37730814246553_0.301029995663988 chr11 69072787 69073419 + 0.301029995663988 NA promoter-TSS (NR_028566) promoter-TSS (NR_028566) -323 NR_028566 100216530 Mm.453052 NR_028566 ENSMUSG00000064899 Snord118 MBI-34 small nucleolar RNA, C/D box 118 snoRNA unique_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988 chr18 68117073 68117573 + 0.301029995663988 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -110623 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988-4 chr6 108233897 108234623 + 0.301029995663988 NA intron (NM_010585, intron 2 of 61) intron (NM_010585, intron 2 of 61) 21164 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-4 chr12 104002944 104003227 + 0.301029995663988 NA intron (NM_027997, intron 2 of 4) intron (NM_027997, intron 2 of 4) 10567 NM_001361912 71907 Mm.326723 NM_027997 ENSMUSG00000058260 Serpina9 2310014L03Rik|AW049635|Centerin serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-7 chr5 34660443 34660977 + 0.301029995663988 NA promoter-TSS (NM_029278) promoter-TSS (NM_029278) 331 NM_019497 14772 Mm.117076 NM_019497 ENSMUSG00000052783 Grk4 A830025H08Rik|GRK|Gprk2l|Gprk4 G protein-coupled receptor kinase 4 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-3 chr11 16760534 16760935 + 0.301029995663988 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 8531 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-12 chr9 59750993 59751314 + 0.301029995663988 NA promoter-TSS (NM_001172071) promoter-TSS (NM_001172071) -21 NM_173018 270163 Mm.249545 NM_173018 ENSMUSG00000039585 Myo9a 4732465J09Rik|C130068I12Rik|C230003M11 myosin IXa protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-10 chr6 100218860 100219279 + 0.301029995663988 NA Intergenic Intergenic 68289 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak1_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988-5 chr7 84501349 84502096 + 0.301029995663988 NA Intergenic Intergenic -27232 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-3 chr2 127332899 127333270 + 0.301029995663988 NA Intergenic Intergenic -3075 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988 chr1 176835527 176836050 + 0.301029995663988 NA non-coding (NR_037996, exon 1 of 1) non-coding (NR_037996, exon 1 of 1) 345 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-8 chr5 122614095 122614514 + 0.301029995663988 NA 5' UTR (NM_001358917, exon 1 of 19) 5' UTR (NM_001358917, exon 1 of 19) 240 NM_001358919 12589 Mm.10125 NM_009879 ENSMUSG00000029469 Ift81 AW060663|Cdv-1|Cdv-1r|Cdv1 intraflagellar transport 81 protein-coding common_peak1_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-4 chr15 79325363 79326025 + 0.301029995663988 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 2677 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak2_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988-3 chr2 37452258 37452646 + 0.301029995663988 NA intron (NM_001033960, intron 1 of 18) CpG 198 NM_001033960 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-16 chr8 12663031 12663399 + 0.301029995663988 NA intron (NM_198031, intron 2 of 21) intron (NM_198031, intron 2 of 21) 8885 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding unique_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988 chr19 57241118 57241537 + 0.301029995663988 NA Intergenic Intergenic -25295 NM_178688 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-4 chr15 100599736 100600078 + 0.301029995663988 NA promoter-TSS (NM_001304965) promoter-TSS (NM_001304965) 77 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-2 chr10 78009484 78009718 + 0.301029995663988 NA exon (NM_008826, exon 1 of 22) exon (NM_008826, exon 1 of 22) 206 NM_008826 18641 Mm.269649 NM_008826 ENSMUSG00000020277 Pfkl AA407869|ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver, B-type protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-9 chr6 72538230 72538721 + 0.301029995663988 NA Intergenic Intergenic -5916 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988 chr10 11281407 11282191 + 0.301029995663988 NA intron (NM_001168297, intron 1 of 2) CpG 212 NM_001168297 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-6 chr5 17746809 17747688 + 0.301029995663988 NA Intergenic Intergenic 88648 NM_001159555 12491 Mm.18628 NM_007643 ENSMUSG00000002944 Cd36 FAT|GPIV|Scarb3 CD36 molecule protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-5 chr17 73942088 73942568 + 0.301029995663988 NA intron (NM_011723, intron 2 of 35) intron (NM_011723, intron 2 of 35) 7868 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-9 chr9 108797066 108797490 + 0.301029995663988 NA intron (NM_029634, intron 1 of 5) intron (NM_029634, intron 1 of 5) 1284 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak2_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-4 chr4 149048966 149049613 + 0.301029995663988 NA intron (NM_019781, intron 2 of 8) intron (NM_019781, intron 2 of 8) 50523 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-9 chr13 53377048 53377364 + 0.301029995663988 NA intron (NM_009269, intron 1 of 14) CpG 155 NM_009269 268656 Mm.240336 NM_009269 ENSMUSG00000021468 Sptlc1 AW552086|C77762|E030036H05|Lcb1|SPT1 serine palmitoyltransferase, long chain base subunit 1 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-12 chr2 103669582 103669967 + 0.301029995663988 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 91496 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-6 chr5 5694985 5695402 + 0.301029995663988 NA promoter-TSS (NM_001285469) promoter-TSS (NM_001285469) -625 NM_028734 74051 Mm.274956 NM_028734 ENSMUSG00000015653 Steap2 4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP six transmembrane epithelial antigen of prostate 2 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-12 chr9 67208138 67208564 + 0.301029995663988 NA Intergenic Intergenic 28375 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988 chr1 62727906 62728585 + 0.301029995663988 NA intron (NM_001077404, intron 2 of 16) intron (NM_001077404, intron 2 of 16) 24928 NM_001077407 18187 Mm.266341 NM_010939 ENSMUSG00000025969 Nrp2 1110048P06Rik|Np-2|Np2|Npn-2|Npn2 neuropilin 2 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-2 chr1 151061977 151062393 + 0.301029995663988 NA Intergenic Intergenic -68750 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-8 chr3 105800961 105801666 + 0.301029995663988 NA promoter-TSS (NM_145541) promoter-TSS (NM_145541) 68 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein 1a protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-4 chr5 64174117 64174459 + 0.301029995663988 NA intron (NM_019636, intron 2 of 19) intron (NM_019636, intron 2 of 19) 14028 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988 chr1 60342822 60343721 + 0.301029995663988 NA promoter-TSS (NM_001313721) promoter-TSS (NM_001313721) -29 NM_030013 77951 Mm.197640 NM_030013 ENSMUSG00000049439 Cyp20a1 A930011N14Rik|Cypm cytochrome P450, family 20, subfamily a, polypeptide 1 protein-coding common_peak2_66_55_-0.0258019044172162_5.794453969849_0.301029995663988-2 chr15 51805042 51805791 + 0.301029995663988 NA intron (NM_080635, intron 2 of 7) intron (NM_080635, intron 2 of 7) 60045 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-4 chr8 11375549 11375967 + 0.301029995663988 NA intron (NM_009932, intron 4 of 47) intron (NM_009932, intron 4 of 47) -62932 NM_009931 12826 Mm.738 NM_009931 ENSMUSG00000031502 Col4a1 Bru|Col4a-1|Raw|Svc collagen, type IV, alpha 1 protein-coding common_peak2_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-5 chr8 4612865 4613568 + 0.301029995663988 NA promoter-TSS (NM_145591) promoter-TSS (NM_145591) 46 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak1_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988-3 chr19 4439857 4440388 + 0.301029995663988 NA promoter-TSS (NM_007485) promoter-TSS (NM_007485) 563 NR_045989 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-2 chr11 58171764 58172278 + 0.301029995663988 NA intron (NM_175001, intron 2 of 6) CpG 367 NM_175001 216767 Mm.259907 NM_175001 ENSMUSG00000020514 Mrpl22 E030011D16Rik|HSPC158|MRP-L25|Rpml25 mitochondrial ribosomal protein L22 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-12 chr9 118980215 118980851 + 0.301029995663988 NA intron (NM_133710, intron 1 of 7) intron (NM_133710, intron 1 of 7) -51263 NR_029742 387218 NR_029742 ENSMUSG00000065513 Mir26a-1 Mirn26a|Mirn26a-1|miR-26a|mir-26a-1 microRNA 26a-1 ncRNA common_peak2_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-3 chr7 133792839 133793206 + 0.301029995663988 NA intron (NM_025850, intron 1 of 10) intron (NM_025850, intron 1 of 10) -10237 NM_001286031 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32|muDDX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_66_55_-0.0258019044172162_5.794453969849_0.301029995663988 chr15 27630056 27630672 + 0.301029995663988 NA intron (NM_001013792, intron 1 of 6) intron (NM_001013792, intron 1 of 6) 329 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988 chr19 43551538 43551951 + 0.301029995663988 NA Intergenic Intergenic -27139 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988 chr1 182124848 182125184 + 0.301029995663988 NA intron (NM_012058, intron 1 of 2) CpG 279 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-2 chr13 56703607 56703994 + 0.301029995663988 NA 5' UTR (NM_001164042, exon 1 of 7) 5' UTR (NM_001164042, exon 1 of 7) 132 NM_001164042 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-16 chrX 12761378 12761703 + 0.301029995663988 NA promoter-TSS (NR_045852) promoter-TSS (NR_045852) 433 NM_012005 26896 Mm.17616 NM_012005 ENSMUSG00000064127 Med14 9930001L01Rik|AU041628|Crsp2|Gm641|ORF1|Trap170 mediator complex subunit 14 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-9 chr5 31633902 31634444 + 0.301029995663988 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 20222 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-6 chr5 123930320 123931035 + 0.301029995663988 NA promoter-TSS (NM_001134767) promoter-TSS (NM_001134767) -12 NM_001134767 208908 Mm.243679 NM_001134767 ENSMUSG00000061882 Ccdc62 AI661708|G1-485-3|Gm150|repro29 coiled-coil domain containing 62 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-7 chr4 55531360 55531856 + 0.301029995663988 NA intron (NM_010637, intron 2 of 4) CpG 867 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak1_49_41_-0.030018560626452_5.37730814246553_0.301029995663988 chr1 9943630 9944130 + 0.301029995663988 NA intron (NR_024067, intron 1 of 3) CpG 238 NR_024067 73824 Mm.28311 NR_024067 ENSMUSG00000098234 Snhg6 1110008H02Rik small nucleolar RNA host gene 6 ncRNA common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-7 chr2 137410044 137410641 + 0.301029995663988 NA Intergenic Intergenic -293822 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-2 chr2 180272815 180273331 + 0.301029995663988 NA intron (NM_145851, intron 1 of 9) CpG 392 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-11 chr7 80789457 80789793 + 0.301029995663988 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 13706 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-10 chr8 106415825 106416183 + 0.301029995663988 NA intron (NM_011764, intron 1 of 3) intron (NM_011764, intron 1 of 3) 665 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak1_104_86_-0.0178068806487133_6.43404005552437_0.301029995663988 chr13 110913384 110915076 + 0.301029995663988 NA Intergenic RSINE1|SINE|B4 -10384 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-5 chr10 19148879 19149157 + 0.301029995663988 NA intron (NR_038021, intron 1 of 3) LTR33|LTR|ERVL 7269 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-7 chr13 17604322 17604680 + 0.301029995663988 NA intron (NM_138654, intron 6 of 13) intron (NM_138654, intron 6 of 13) 90264 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988 chr14 54618156 54618542 + 0.301029995663988 NA promoter-TSS (NM_011186) promoter-TSS (NM_011186) -354 NM_011186 19173 Mm.8911 NM_011186 ENSMUSG00000022193 Psmb5 - proteasome (prosome, macropain) subunit, beta type 5 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-4 chr11 29514713 29514980 + 0.301029995663988 NA intron (NM_001163454, intron 1 of 2) intron (NM_001163454, intron 1 of 2) 187 NM_026465 67939 Mm.251087 NM_026465 ENSMUSG00000032673 Prorsd1 2010316F05Rik|Ncrna00117|Prdxdd1 prolyl-tRNA synthetase domain containing 1 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-11 chr8 60632041 60632668 + 0.301029995663988 NA promoter-TSS (NM_027756) promoter-TSS (NM_027756) -471 NM_027756 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-13 chr9 88273402 88273987 + 0.301029995663988 NA Intergenic Intergenic -53915 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak1_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-5 chr4 88796824 88797188 + 0.301029995663988 NA promoter-TSS (NM_001243166).2 promoter-TSS (NM_001243166).2 -231 NM_001243166 545653 Mm.489586 NM_001243166 ENSMUSG00000099420 Gm13279 - predicted gene 13279 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-3 chr12 27431881 27432247 + 0.301029995663988 NA Intergenic Intergenic -89346 NM_009234 20666 Mm.41702 NM_009234 ENSMUSG00000063632 Sox11 1110038H03Rik|6230403H02Rik|AI836553|end1 SRY (sex determining region Y)-box 11 protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-7 chr9 72133376 72133986 + 0.301029995663988 NA Intergenic Intergenic -21862 NM_011544 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-10 chr7 89676604 89677326 + 0.301029995663988 NA intron (NM_181407, intron 1 of 13) intron (NM_181407, intron 1 of 13) 44147 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik malic enzyme 3, NADP(+)-dependent, mitochondrial protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-6 chr18 77767027 77767582 + 0.301029995663988 NA intron (NM_001357531, intron 3 of 10) intron (NM_001357531, intron 3 of 10) 495 NM_146089 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-3 chr10 17548443 17548960 + 0.301029995663988 NA Intergenic Intergenic -174527 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-2 chr1 153737189 153737864 + 0.301029995663988 NA non-coding (NR_046171, exon 1 of 3) non-coding (NR_046171, exon 1 of 3) 303 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak2_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-5 chr8 18782359 18782829 + 0.301029995663988 NA intron (NM_173189, intron 12 of 13) intron (NM_173189, intron 12 of 13) -41032 NM_007426 11601 Mm.439874 NM_007426 ENSMUSG00000031465 Angpt2 Agpt2|Ang-2|Ang2 angiopoietin 2 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-4 chr3 102477486 102477944 + 0.301029995663988 NA intron (NM_001112698, intron 1 of 2) intron (NM_001112698, intron 1 of 2) 7796 NM_013609 18049 Mm.1259 NM_013609 ENSMUSG00000027859 Ngf Ngfb|beta-NGF nerve growth factor protein-coding common_peak1_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988-2 chr12 98282470 98282806 + 0.301029995663988 NA Intergenic Intergenic 14003 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-6 chr14 65113156 65113756 + 0.301029995663988 NA Intergenic Intergenic -15350 NM_001360385 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-9 chr5 135777975 135778263 + 0.301029995663988 NA promoter-TSS (NM_008617) promoter-TSS (NM_008617) 182 NM_001289554 76571 Mm.247666 NM_029659 ENSMUSG00000019178 Styxl1 1700011C14Rik|Dusp24|Mkstyx serine/threonine/tyrosine interacting-like 1 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-15 chr8 123498899 123499499 + 0.301029995663988 NA intron (NR_028260, intron 13 of 15) intron (NR_028260, intron 13 of 15) 16256 NM_001170975 72185 Mm.27925 NM_028146 ENSMUSG00000031970 Dbndd1 2810427I04Rik|D8Ertd590e dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-5 chr4 102570026 102570524 + 0.301029995663988 NA 5' UTR (NM_001177980, exon 1 of 10) 5' UTR (NM_001177980, exon 1 of 10) 215 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-8 chr5 86065045 86065587 + 0.301029995663988 NA intron (NM_001345903, intron 1 of 19) CpG 267 NM_001345902 12617 Mm.4649 NM_007683 ENSMUSG00000029253 Cenpc1 CENP-C|Cenpc centromere protein C1 protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-11 chr7 130546915 130547324 + 0.301029995663988 NA exon (NM_001162855, exon 1 of 11) exon (NM_001162855, exon 1 of 11) 262 NM_001162855 67872 Mm.21714 NM_001162855 ENSMUSG00000040331 Nsmce4a 2410003A14Rik NSE4 homolog A, SMC5-SMC6 complex component protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-13 chr2 165992656 165992961 + 0.301029995663988 NA intron (NM_008679, intron 1 of 22) CpG 171 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-5 chr17 80762523 80763095 + 0.301029995663988 NA Intergenic Intergenic -34784 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988 chr1 12714920 12715331 + 0.301029995663988 NA intron (NM_001198566, intron 1 of 20) intron (NM_001198566, intron 1 of 20) -3420 NM_172294 240725 Mm.45563 NM_172294 ENSMUSG00000016918 Sulf1 AI467640|AW121680|mKIAA1077 sulfatase 1 protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-5 chr5 129669831 129670395 + 0.301029995663988 NA promoter-TSS (NM_172462) promoter-TSS (NM_172462) -25 NM_172462 22648 Mm.135067 NM_172462 ENSMUSG00000051034 Zfp11 6720465D24|Krox-6|Zfp-11 zinc finger protein 11 protein-coding common_peak2_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988 chr6 52229983 52230659 + 0.301029995663988 NA promoter-TSS (NR_029912) promoter-TSS (NR_029912) -156 NR_029912 723820 NR_029912 ENSMUSG00000065443 Mir196b Mirn196b|mir-196b microRNA 196b ncRNA unique_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988 chr3 52531788 52532204 + 0.301029995663988 NA intron (NR_153344, intron 1 of 4) intron (NR_153344, intron 1 of 4) 15032 NR_153344 102631981 Mm.394225 NR_153344 Gm30173 - predicted gene, 30173 ncRNA common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-2 chr1 164249838 164250281 + 0.301029995663988 NA intron (NM_001276455, intron 1 of 5) intron (NM_001276455, intron 1 of 5) 1013 NM_054087 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA|ThTr-1 solute carrier family 19 (thiamine transporter), member 2 protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-3 chr1 176835547 176836018 + 0.301029995663988 NA non-coding (NR_037996, exon 1 of 1) non-coding (NR_037996, exon 1 of 1) 351 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-7 chr15 41713147 41713599 + 0.301029995663988 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -75622 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-12 chr6 50389545 50390215 + 0.301029995663988 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -7043 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-9 chr8 46739252 46739540 + 0.301029995663988 NA promoter-TSS (NM_008391) promoter-TSS (NM_008391) 119 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak1_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988 chr1 91298408 91299245 + 0.301029995663988 NA intron (NM_016717, intron 1 of 11) intron (NM_016717, intron 1 of 11) 488 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-8 chr7 19748777 19749499 + 0.301029995663988 NA intron (NM_008990, intron 1 of 8) CpG 435 NM_008990 19294 Mm.4341 NM_008990 ENSMUSG00000062300 Nectin2 AI325026|AI987993|Cd112|MPH|Pvr|Pvrl2|Pvs|nectin-2 nectin cell adhesion molecule 2 protein-coding unique_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988 chr9 63896992 63897404 + 0.301029995663988 NA Intergenic Intergenic 124861 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_66_55_-0.0258019044172162_5.794453969849_0.301029995663988-4 chr8 94036208 94037030 + 0.301029995663988 NA promoter-TSS (NM_177767) promoter-TSS (NM_177767) 420 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding common_peak1_49_41_-0.030018560626452_5.37730814246553_0.301029995663988-3 chr15 76576430 76576880 + 0.301029995663988 NA intron (NM_172960, intron 1 of 14) intron (NM_172960, intron 1 of 14) 296 NR_073123 268822 Mm.181624 NM_172960 ENSMUSG00000022550 Adck5 A230108P17 aarF domain containing kinase 5 protein-coding common_peak1_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988-6 chr8 128660689 128661194 + 0.301029995663988 NA Intergenic Intergenic -24713 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-2 chr3 94757603 94758054 + 0.301029995663988 NA Intergenic CpG 28687 NM_001293727 70737 Mm.87634 NM_001037711 ENSMUSG00000068876 Cgn 6330408J11Rik cingulin protein-coding common_peak2_59_49_-0.0203786241488393_5.63366687770031_0.301029995663988-6 chr8 82863541 82864564 + 0.301029995663988 NA exon (NM_177378, exon 1 of 7) exon (NM_177378, exon 1 of 7) 696 NM_177378 330812 Mm.491438 NM_177378 ENSMUSG00000047747 Rnf150 A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214 ring finger protein 150 protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-2 chr11 23894731 23895251 + 0.301029995663988 NA intron (NM_172555, intron 1 of 21) CpG 279 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak1_48_40_-0.0241938612520292_5.34545507399207_0.301029995663988-9 chr7 80773659 80774209 + 0.301029995663988 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 29397 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-10 chr5 108312894 108313356 + 0.301029995663988 NA intron (NM_001310689, intron 1 of 12) intron (NM_001310689, intron 1 of 12) 200 NM_001310689 433931 Mm.319881 NM_001081234 ENSMUSG00000029263 Pigg Gpi7 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding common_peak1_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988-4 chr3 53101038 53101571 + 0.301029995663988 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 59757 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-15 chr4 42949906 42950132 + 0.301029995663988 NA promoter-TSS (NM_001355440) promoter-TSS (NM_001355440) 152 NM_001355439 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-8 chr8 3608656 3609142 + 0.301029995663988 NA exon (NM_001163749, exon 17 of 17) exon (NM_001163749, exon 17 of 17) 12397 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-14 chr8 3420508 3420772 + 0.301029995663988 NA intron (NM_133962, intron 1 of 19) intron (NM_133962, intron 1 of 19) 27632 NM_133962 102098 Mm.170461 NM_133962 ENSMUSG00000004568 Arhgef18 AI467246|D030053O22Rik rho/rac guanine nucleotide exchange factor (GEF) 18 protein-coding common_peak2_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-6 chr2 35342294 35342670 + 0.301029995663988 NA Intergenic Intergenic -5473 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding common_peak2_66_55_-0.0258019044172162_5.794453969849_0.301029995663988-3 chr17 35776153 35776752 + 0.301029995663988 NA intron (NR_045459, intron 1 of 2) intron (NR_045459, intron 1 of 2) 4002 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA common_peak1_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-5 chr15 77806973 77807633 + 0.301029995663988 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 34872 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-8 chr13 44729990 44730427 + 0.301029995663988 NA promoter-TSS (NM_001205044) promoter-TSS (NM_001205044) -566 NM_021878 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak2_66_55_-0.0258019044172162_5.794453969849_0.301029995663988 chr1 181841825 181842398 + 0.301029995663988 NA intron (NM_133815, intron 1 of 13) CpG 290 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-4 chr11 22286433 22286883 + 0.301029995663988 NA intron (NM_001252515, intron 1 of 24) CpG 137 NM_153078 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding common_peak1_35_30_-0.0624850617141703_4.92295377952979_0.301029995663988-8 chr9 79793043 79793360 + 0.301029995663988 NA promoter-TSS (NR_040734) promoter-TSS (NR_040734) 229 NM_133718 69981 Mm.486324 NM_133718 ENSMUSG00000032328 Tmem30a 2010200I23Rik|AW540225|Cdc50a|D9Wsu20e transmembrane protein 30A protein-coding common_peak2_30_26_-0.0773829830374417_4.71619601064475_0.301029995663988-11 chr19 37375891 37376160 + 0.301029995663988 NA promoter-TSS (NM_010615) promoter-TSS (NM_010615) -378 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding common_peak2_31_26_-0.0319024375189167_4.73893628340401_0.301029995663988-13 chr7 45062524 45062886 + 0.301029995663988 NA intron (NM_001163684, intron 1 of 8) intron (NM_001163684, intron 1 of 8) 276 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak2_47_40_-0.0537313377460782_5.33068633574504_0.301029995663988-2 chr7 90302184 90302790 + 0.301029995663988 NA non-coding (NR_110348, exon 1 of 9) non-coding (NR_110348, exon 1 of 9) 132 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-5 chr16 31081116 31081355 + 0.301029995663987 NA exon (NM_198626, exon 1 of 4) exon (NM_198626, exon 1 of 4) 197 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-14 chr6 55175468 55175688 + 0.301029995663987 NA promoter-TSS (NM_009349) promoter-TSS (NM_009349) -588 NM_009349 21743 Mm.299 NM_009349 ENSMUSG00000003477 Inmt Temt indolethylamine N-methyltransferase protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-6 chr13 64417139 64417424 + 0.301029995663987 NA Intergenic Intergenic -15272 NM_053180 105278 Mm.74982 NM_053180 ENSMUSG00000021483 Cdk20 4932702G04Rik|AU019450|AW558027|CDCH|Ccrk|PNQLARE|p42 cyclin-dependent kinase 20 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987 chr11 16769968 16770179 + 0.301029995663987 NA intron (NM_207655, intron 1 of 27) intron (NM_207655, intron 1 of 27) 17870 NM_007912 13649 Mm.8534 NM_007912 ENSMUSG00000020122 Egfr 9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2 epidermal growth factor receptor protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-6 chr15 5089296 5089503 + 0.301029995663987 NA Intergenic Intergenic 19134 NM_001163138 239319 Mm.31252 NM_001163138 ENSMUSG00000041849 Card6 D730008L15 caspase recruitment domain family, member 6 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-6 chr16 91484742 91484933 + 0.301029995663987 NA promoter-TSS (NM_010508) promoter-TSS (NM_010508) -378 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-16 chrX 7722399 7722736 + 0.301029995663987 NA promoter-TSS (NM_001290794) promoter-TSS (NM_001290794) 347 NM_001290792 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-4 chr15 77219880 77220104 + 0.301029995663987 NA intron (NM_001358772, intron 2 of 14) intron (NM_001358772, intron 2 of 14) 25616 NM_001358772 93686 Mm.202774 NM_053104 ENSMUSG00000033565 Rbfox2 Fbm2|Fxh|Hrnbp2|Rbm9 RNA binding protein, fox-1 homolog (C. elegans) 2 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-13 chr5 66560143 66560370 + 0.301029995663987 NA intron (NM_001310626, intron 1 of 15) (GGGA)n|Simple_repeat|Simple_repeat 58561 NM_009686 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-15 chr9 111119470 111119692 + 0.301029995663987 NA intron (NM_027742, intron 1 of 13) intron (NM_027742, intron 1 of 13) 1470 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987 chr1 171280394 171280642 + 0.301029995663987 NA exon (NM_008911, exon 3 of 13) exon (NM_008911, exon 3 of 13) 668 NM_008911 19044 Mm.266888 NM_008911 ENSMUSG00000062729 Ppox Ppo protoporphyrinogen oxidase protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-11 chr3 121683511 121683710 + 0.301029995663987 NA TTS (NM_001033814) TTS (NM_001033814) 12847 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-4 chr12 20920916 20921186 + 0.301029995663987 NA Intergenic CpG -105272 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-10 chr7 28158385 28158658 + 0.301029995663987 NA intron (NM_001164655, intron 16 of 19) intron (NM_001164655, intron 16 of 19) -11227 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-8 chr3 152512346 152512623 + 0.301029995663987 NA intron (NM_001081277, intron 8 of 13) intron (NM_001081277, intron 8 of 13) 115800 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-8 chr16 55535876 55536126 + 0.301029995663987 NA Intergenic Intergenic 41270 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-14 chr8 70552464 70552713 + 0.301029995663987 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 12913 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-3 chr11 77812505 77812710 + 0.301029995663987 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 11309 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-9 chr9 70032849 70033068 + 0.301029995663987 NA 3' UTR (NM_028087, exon 3 of 3) 3' UTR (NM_028087, exon 3 of 3) 5130 NM_028087 72077 Mm.195555 NM_028087 ENSMUSG00000032226 Gcnt3 2010013H22Rik|2210021I22Rik|2210401J11Rik glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-10 chr3 96105970 96106199 + 0.301029995663987 NA intron (NM_001025614, intron 1 of 11) intron (NM_001025614, intron 1 of 11) 1557 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-7 chr16 27388246 27388464 + 0.301029995663987 NA promoter-TSS (NM_026202) promoter-TSS (NM_026202) -601 NM_001025615 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-3 chr1 182764408 182764713 + 0.301029995663987 NA promoter-TSS (NM_001356463) promoter-TSS (NM_001356463) -336 NM_144796 96935 Mm.331052 NM_144796 ENSMUSG00000038576 Susd4 AI848994|E430021N18Rik|N28096 sushi domain containing 4 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-7 chr17 56360218 56360421 + 0.301029995663987 NA intron (NM_172132, intron 5 of 22) intron (NM_172132, intron 5 of 22) 34269 NM_001357909 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b lysine (K)-specific demethylase 4B protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-2 chr11 69063665 69063880 + 0.301029995663987 NA Intergenic Intergenic 3997 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-2 chr1 92086099 92086342 + 0.301029995663987 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 94121 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-2 chr11 8656552 8656754 + 0.301029995663987 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 7882 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-3 chr11 89581583 89581800 + 0.301029995663987 NA intron (NM_001327810, intron 2 of 19) intron (NM_001327810, intron 2 of 19) 115245 NM_001327810 382543 Mm.60997 NM_172534 ENSMUSG00000047773 Ankfn1 4932411E22Rik|Gm1175|nmf9 ankyrin-repeat and fibronectin type III domain containing 1 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-12 chr6 42297205 42297479 + 0.301029995663987 NA intron (NM_013491, intron 7 of 22) intron (NM_013491, intron 7 of 22) 10657 NM_013491 12723 Mm.386757 NM_013491 ENSMUSG00000029862 Clcn1 Clc-1|Clc1|SMCC1|adr|mto|myotonia|nmf355 chloride channel, voltage-sensitive 1 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-9 chr4 129034790 129035017 + 0.301029995663987 NA Intergenic Intergenic -23368 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-12 chr5 25083498 25083911 + 0.301029995663987 NA intron (NM_145401, intron 1 of 15) intron (NM_145401, intron 1 of 15) 16938 NM_145401 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-11 chr5 65287144 65287407 + 0.301029995663987 NA intron (NM_011258, intron 11 of 24) intron (NM_011258, intron 11 of 24) 48364 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-6 chr5 25100833 25101045 + 0.301029995663987 NA promoter-TSS (NR_027851) promoter-TSS (NR_027851) -36 NR_027851 67261 Mm.461781 NM_026059 ENSMUSG00000043833 2900005J15Rik - RIKEN cDNA 2900005J15 gene ncRNA common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987 chr1 193402743 193402990 + 0.301029995663987 NA Intergenic Intergenic -32584 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-9 chr5 135711806 135712004 + 0.301029995663987 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 22760 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-4 chr15 36578505 36578700 + 0.301029995663987 NA Intergenic Intergenic -23029 NM_025712 66696 Mm.253627 NM_025712 ENSMUSG00000013611 Snx31 4631426E05Rik sorting nexin 31 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-5 chr13 94382514 94382735 + 0.301029995663987 NA intron (NM_009680, intron 1 of 26) intron (NM_009680, intron 1 of 26) 23664 NM_009680 11774 Mm.21185 NM_009680 ENSMUSG00000021686 Ap3b1 AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2 adaptor-related protein complex 3, beta 1 subunit protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-9 chr3 32736087 32736347 + 0.301029995663987 NA promoter-TSS (NM_025316) promoter-TSS (NM_025316) 538 NM_029017 74600 Mm.288960 NM_029017 ENSMUSG00000037531 Mrpl47 4833424P18Rik|CGI-204|Gm9859|L47mt|MRP-L47|MTF/L47|NCM1 mitochondrial ribosomal protein L47 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-5 chr11 118477031 118477232 + 0.301029995663987 NA non-coding (NR_153103, exon 1 of 14) non-coding (NR_153103, exon 1 of 14) 299 NM_001359368 217364 Mm.473963 NM_172573 ENSMUSG00000033857 Engase C130099A03|D230014K01Rik endo-beta-N-acetylglucosaminidase protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-7 chr6 8510166 8510434 + 0.301029995663987 NA exon (NM_133236, exon 1 of 8) exon (NM_133236, exon 1 of 8) 700 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-3 chr14 76739503 76739712 + 0.301029995663987 NA Intergenic Intergenic -20524 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-4 chr11 102995993 102996376 + 0.301029995663987 NA intron (NM_026551, intron 4 of 4) ID_B1|SINE|B4 3737 NR_105896 102466988 NR_105896 ENSMUSG00000098613 Mir6931 Gm27303|mmu-mir-6931 microRNA 6931 ncRNA common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-10 chr4 149780478 149780722 + 0.301029995663987 NA Intergenic Intergenic -6333 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-8 chr17 79701782 79702146 + 0.301029995663987 NA Intergenic Intergenic 13077 NM_009994 13078 Mm.214016 NM_009994 ENSMUSG00000024087 Cyp1b1 CP1B|P4501b1 cytochrome P450, family 1, subfamily b, polypeptide 1 protein-coding unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-8 chr7 98512088 98512292 + 0.301029995663987 NA Intergenic Intergenic 17968 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding unique_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987 chr1 30946893 30947100 + 0.301029995663987 NA intron (NM_011200, intron 1 of 5) intron (NM_011200, intron 1 of 5) 2714 NR_002688 433406 Mm.389003 NR_002688 Gm13363 - predicted gene 13363 pseudo unique_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-5 chr18 34504801 34505026 + 0.301029995663987 NA intron (NM_146084, intron 1 of 20) intron (NM_146084, intron 1 of 20) 1910 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak1_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-2 chr11 16897541 16897752 + 0.301029995663987 NA intron (NM_207655, intron 20 of 27) intron (NM_207655, intron 20 of 27) 53636 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-7 chr17 26529437 26529737 + 0.301029995663987 NA Intergenic Intergenic -21115 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_11_10_-0.141500992618802_3.3886811223279_0.301029995663987-13 chr7 28950749 28950960 + 0.301029995663987 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 11478 NM_001360549 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-16 chr5 122778911 122779174 + 0.301029995663985 NA intron (NM_001199676, intron 1 of 16) CpG 368 NM_001199676 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-21 chrX 7739410 7739886 + 0.301029995663985 NA intron (NM_207202, intron 1 of 9) intron (NM_207202, intron 1 of 9) 1676 NM_207202 54648 Mm.63342 NM_207202 ENSMUSG00000031150 Ccdc120 AA030924|DXImx50e|Jm11|Sfc25 coiled-coil domain containing 120 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-8 chr16 24515637 24515956 + 0.301029995663985 NA intron (NM_178665, intron 3 of 12) intron (NM_178665, intron 3 of 12) -13518 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-6 chr8 83607493 83607948 + 0.301029995663985 NA promoter-TSS (NM_018808) promoter-TSS (NM_018808) -455 NM_018808 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-9 chr17 87975128 87975614 + 0.301029995663985 NA exon (NM_010830, exon 1 of 10) exon (NM_010830, exon 1 of 10) 321 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-6 chr15 97904853 97905448 + 0.301029995663985 NA intron (NM_009504, intron 1 of 9) intron (NM_009504, intron 1 of 9) 3146 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-15 chr3 151565930 151566295 + 0.301029995663985 NA Intergenic Intergenic 128230 NM_133222 170757 Mm.317261 NM_133222 ENSMUSG00000039167 Adgrl4 1110033N21Rik|ETL1|Eltd1|Etl adhesion G protein-coupled receptor L4 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-5 chr12 76547695 76547934 + 0.301029995663985 NA non-coding (NR_046044, exon 1 of 3) non-coding (NR_046044, exon 1 of 3) 111 NR_046044 100504549 Mm.440349 NR_046044 ENSMUSG00000112388 AI463170 - expressed sequence AI463170 ncRNA unique_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985 chr1 75382063 75382762 + 0.301029995663985 NA intron (NM_001085371, intron 1 of 10) intron (NM_001085371, intron 1 of 10) 298 NM_001085371 11790 Mm.275397 NM_007463 ENSMUSG00000026207 Speg AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297 SPEG complex locus protein-coding unique_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-3 chr15 41719015 41719436 + 0.301029995663985 NA intron (NR_152565, intron 3 of 17) intron (NR_152565, intron 3 of 17) -69770 NM_001358976 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-5 chr13 49584187 49584656 + 0.301029995663985 NA intron (NM_001360708, intron 1 of 2) intron (NM_001360708, intron 1 of 2) 1959 NM_001360708 27047 Mm.390589 NM_012050 ENSMUSG00000048368 Omd OSAD|SLRR2C osteomodulin protein-coding common_peak2_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-3 chr2 148731328 148732370 + 0.301029995663985 NA intron (NM_019632, intron 1 of 10) intron (NM_019632, intron 1 of 10) 571 NM_019632 17957 Mm.274308 NM_019632 ENSMUSG00000027438 Napb Brp14|E161|I47|SNARE|b-SNAP N-ethylmaleimide sensitive fusion protein attachment protein beta protein-coding common_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-2 chr3 103019852 103020282 + 0.301029995663985 NA promoter-TSS (NM_144901) promoter-TSS (NM_144901) -479 NM_001310693 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak2_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985 chr10 93360777 93361475 + 0.301029995663985 NA Intergenic Intergenic 24915 NR_038014 432488 Mm.32833 NR_038014 Gm17745 Gm3546 predicted gene, 17745 ncRNA common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-17 chr4 11736304 11736702 + 0.301029995663985 NA Intergenic Intergenic -21654 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-10 chr19 46689913 46690143 + 0.301029995663985 NA exon (NM_025563, exon 1 of 5) exon (NM_025563, exon 1 of 5) 122 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985 chr1 4807732 4808008 + 0.301029995663985 NA promoter-TSS (NM_008866) promoter-TSS (NM_008866) 47 NM_008866 18777 Mm.299955 NM_008866 ENSMUSG00000025903 Lypla1 APT-1|Gm39587|LPL-I|Pla1a lysophospholipase 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-13 chr18 12236053 12236375 + 0.301029995663985 NA exon (NM_008720, exon 1 of 25) exon (NM_008720, exon 1 of 25) 172 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm NPC intracellular cholesterol transporter 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-7 chr12 8386271 8386460 + 0.301029995663985 NA Intergenic Intergenic 72932 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985 chr7 99182350 99182992 + 0.301029995663985 NA promoter-TSS (NM_026384) promoter-TSS (NM_026384) 42 NM_026384 67800 Mm.180189 NM_026384 ENSMUSG00000030747 Dgat2 0610010B06Rik|ARAT|DGAT-2 diacylglycerol O-acyltransferase 2 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-11 chr16 4212906 4213253 + 0.301029995663985 NA intron (NM_001025432, intron 1 of 30) CpG 325 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-4 chr11 48816496 48816905 + 0.301029995663985 NA 5' UTR (NM_145377, exon 1 of 6) 5' UTR (NM_145377, exon 1 of 6) 691 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-16 chr4 5768207 5768512 + 0.301029995663985 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 44047 NM_001355716 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding common_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-3 chr4 118290432 118291243 + 0.301029995663985 NA intron (NM_011213, intron 1 of 32) CpG 560 NM_011213 19268 Mm.29855 NM_011213 ENSMUSG00000033295 Ptprf AA591035|LAR|LARS|RPTP-LAR protein tyrosine phosphatase, receptor type, F protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-18 chr7 31149459 31149911 + 0.301029995663985 NA intron (NR_153431, intron 1 of 18) intron (NR_153431, intron 1 of 18) 1486 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-12 chr18 35044328 35044829 + 0.301029995663985 NA Intergenic Intergenic -74334 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-2 chr1 136683574 136683851 + 0.301029995663985 NA promoter-TSS (NR_045325) promoter-TSS (NR_045325) 83 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-5 chr11 12535325 12535642 + 0.301029995663985 NA Intergenic Intergenic -70523 NM_001282993 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-6 chr15 58164389 58164656 + 0.301029995663985 NA Intergenic B1_Mur4|SINE|Alu 23156 NM_001326599 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding unique_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-3 chr7 28918862 28919227 + 0.301029995663985 NA exon (NM_001360548, exon 2 of 21) exon (NM_001360548, exon 2 of 21) 37388 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985 chr1 111864328 111864819 + 0.301029995663985 NA 5' UTR (NM_001081316, exon 1 of 2) 5' UTR (NM_001081316, exon 1 of 2) 345 NM_001081316 319901 Mm.103468 NM_001081316 ENSMUSG00000038702 Dsel 9330132E09Rik|DS-epi2 dermatan sulfate epimerase-like protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-3 chr10 120617139 120617407 + 0.301029995663985 NA Intergenic Intergenic -140804 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-2 chr11 35938428 35938810 + 0.301029995663985 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 41470 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-9 chr16 32068584 32068786 + 0.301029995663985 NA intron (NM_177326, intron 1 of 14) intron (NM_177326, intron 1 of 14) 10657 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 (RAC1) activated kinase 2 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-12 chr17 15021604 15022132 + 0.301029995663985 NA intron (NM_001123372, intron 11 of 11) intron (NM_001123372, intron 11 of 11) -11684 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-3 chr10 42274823 42275084 + 0.301029995663985 NA exon (NM_019740, exon 2 of 4) exon (NM_019740, exon 2 of 4) 1789 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding unique_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-5 chr6 35253410 35253718 + 0.301029995663985 NA intron (NR_027875, intron 1 of 2) intron (NR_027875, intron 1 of 2) 832 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-12 chr3 32333772 32334288 + 0.301029995663985 NA TTS (NM_009517) TTS (NM_009517) -31459 NR_027966 67576 Mm.435324 NR_027966 4930429B21Rik - RIKEN cDNA 4930429B21 gene ncRNA common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-19 chr7 67644800 67645115 + 0.301029995663985 NA intron (NR_028144, intron 1 of 8) intron (NR_028144, intron 1 of 8) 279 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-2 chr10 128376373 128376942 + 0.301029995663985 NA promoter-TSS (NM_172790) promoter-TSS (NM_172790) -467 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding unique_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-2 chr4 119121601 119122030 + 0.301029995663985 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 13070 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-21 chr6 146112071 146112399 + 0.301029995663985 NA intron (NM_019923, intron 56 of 56) intron (NM_019923, intron 56 of 56) 178113 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-7 chr16 4644527 4644943 + 0.301029995663985 NA intron (NM_139307, intron 1 of 1) intron (NM_139307, intron 1 of 1) 4790 NM_139307 246154 Mm.482140 NM_139307 ENSMUSG00000039646 Vasn 2610528G05Rik|Atia|Slitl2 vasorin protein-coding common_peak2_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-2 chr12 113141730 113142266 + 0.301029995663985 NA intron (NM_001347443, intron 1 of 6) intron (NM_001347443, intron 1 of 6) 1393 NM_001347443 68337 Mm.133825 NM_024223 ENSMUSG00000006356 Crip2 0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp cysteine rich protein 2 protein-coding unique_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-4 chr4 94614546 94614816 + 0.301029995663985 NA intron (NM_026319, intron 1 of 19) intron (NM_026319, intron 1 of 19) 190 NM_026319 67694 Mm.240619 NM_026319 ENSMUSG00000028576 Ift74 1700029H06Rik|Ccdc2|Cmg1|b2b796Clo intraflagellar transport 74 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-6 chr15 57906156 57906653 + 0.301029995663985 NA Intergenic B1_Mus2|SINE|Alu -5795 NM_001081396 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-13 chr4 136569391 136569966 + 0.301029995663985 NA intron (NM_001356567, intron 7 of 19) B1_Mur4|SINE|Alu 33045 NM_001356567 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-3 chr1 192854401 192854697 + 0.301029995663985 NA promoter-TSS (NR_131748) promoter-TSS (NR_131748) -379 NR_131748 100503471 Mm.380305 NR_131748 Gm15867 - predicted gene 15867 ncRNA common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-19 chr4 139216947 139217364 + 0.301029995663985 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 23044 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-9 chr4 150709846 150710446 + 0.301029995663985 NA Intergenic Intergenic -57972 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-11 chr2 27802097 27802404 + 0.301029995663985 NA Intergenic Intergenic -84175 NM_015734 12831 Mm.7281 NM_015734 ENSMUSG00000026837 Col5a1 AI413331 collagen, type V, alpha 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-10 chr15 102406588 102406977 + 0.301029995663985 NA intron (NM_013672, intron 1 of 5) CpG-5406 466 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-10 chr9 22467787 22468299 + 0.301029995663985 NA intron (NM_018739, intron 1 of 5) CpG 313 NM_018739 55934 Mm.38235 NM_018739 ENSMUSG00000032239 Rp9 PAP-1|Rp9h retinitis pigmentosa 9 (human) protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-16 chr8 36745029 36745437 + 0.301029995663985 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -12179 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-4 chr10 79116365 79116660 + 0.301029995663985 NA Intergenic Intergenic -18912 NM_001004362 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-8 chr12 9838845 9839247 + 0.301029995663985 NA Intergenic Intergenic 264604 NM_011859 23967 Mm.45055 NM_011859 ENSMUSG00000048387 Osr1 Odd1|Osr odd-skipped related transcription factor 1 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-5 chr12 17220139 17220703 + 0.301029995663985 NA Intergenic CT-rich|Low_complexity|Low_complexity -43533 NM_201531 382571 Mm.40173 NM_201531 ENSMUSG00000051726 Kcnf1 Gm1182|Kv5.1 potassium voltage-gated channel, subfamily F, member 1 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-14 chr3 89266798 89267058 + 0.301029995663985 NA exon (NM_026767, exon 2 of 2) exon (NM_026767, exon 2 of 2) 467 NM_026767 68563 Mm.272927 NM_026767 ENSMUSG00000042737 Dpm3 1110001H19Rik|AV117483 dolichyl-phosphate mannosyltransferase polypeptide 3 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-17 chr6 115676814 115677053 + 0.301029995663985 NA promoter-TSS (NM_001356333) promoter-TSS (NM_001356333) -298 NM_029780 110157 Mm.184163 NM_029780 ENSMUSG00000000441 Raf1 6430402F14Rik|AA990557|BB129353|Craf1|D830050J10Rik|Raf-1|c-Raf|cRaf|v-Raf v-raf-leukemia viral oncogene 1 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-11 chr17 44651506 44651844 + 0.301029995663985 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 84501 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-7 chr15 77807099 77807534 + 0.301029995663985 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 34859 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-8 chr17 78736269 78736660 + 0.301029995663985 NA promoter-TSS (NM_011500) promoter-TSS (NM_011500) 96 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding unique_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-4 chr8 85035898 85036241 + 0.301029995663985 NA promoter-TSS (NM_145390) promoter-TSS (NM_145390) -846 NM_145390 212999 Mm.220357 NM_145390 ENSMUSG00000031691 Tnpo2 1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2 transportin 2 (importin 3, karyopherin beta 2b) protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985 chr1 64930340 64930641 + 0.301029995663985 NA intron (NM_001039493, intron 2 of 7) intron (NM_001039493, intron 2 of 7) 26334 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-2 chr1 60000695 60001046 + 0.301029995663985 NA intron (NM_001357296, intron 9 of 10) intron (NM_001357296, intron 9 of 10) 42252 NM_001357296 70375 Mm.17834 NM_027407 ENSMUSG00000026018 Ica1l 1700030B17Rik|Als2cr15|b2b3465Clo islet cell autoantigen 1-like protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-4 chr11 57962227 57962555 + 0.301029995663985 NA Intergenic Intergenic -46673 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985 chr13 45391908 45392241 + 0.301029995663985 NA intron (NM_153789, intron 2 of 6) intron (NM_153789, intron 2 of 6) 2332 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-15 chr5 113993230 113993628 + 0.301029995663985 NA intron (NM_198109, intron 1 of 14) CpG 328 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot protein phosphatase 1 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-4 chr13 47277313 47277878 + 0.301029995663985 NA Intergenic Intergenic 83592 NM_001170643 218215 Mm.287609 NM_146042 ENSMUSG00000038068 Rnf144b BC025007|E130105P19Rik|Ibrdc2|Pir2 ring finger protein 144B protein-coding common_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-4 chr4 129232371 129233264 + 0.301029995663985 NA intron (NM_001285867, intron 1 of 6) intron (NM_001285867, intron 1 of 6) -4906 NM_001285866 97130 Mm.331907 NM_001033189 ENSMUSG00000050390 C77080 mKIAA1522 expressed sequence C77080 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-7 chr15 81584816 81585054 + 0.301029995663985 NA Intergenic Intergenic -1279 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-3 chr11 94428216 94428548 + 0.301029995663985 NA intron (NM_009783, intron 22 of 35) intron (NM_009783, intron 22 of 35) -35406 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-18 chr4 107469470 107469695 + 0.301029995663985 NA intron (NM_147221, intron 2 of 10) intron (NM_147221, intron 2 of 10) 34863 NM_147221 230587 Mm.331757 NM_147221 ENSMUSG00000034762 Glis1 Gli5|Gli6|GliH1 GLIS family zinc finger 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-6 chr11 106193850 106194118 + 0.301029995663985 NA promoter-TSS (NM_028126) promoter-TSS (NM_028126) -381 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-20 chr6 108233083 108233532 + 0.301029995663985 NA intron (NM_010585, intron 2 of 61) intron (NM_010585, intron 2 of 61) 20211 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-8 chr16 75766355 75766761 + 0.301029995663985 NA intron (NR_027492, intron 1 of 5) intron (NR_027492, intron 1 of 5) 260 NR_027492 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-17 chr9 120013203 120013423 + 0.301029995663985 NA TTS (NM_011724) TTS (NM_011724) 10285 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-14 chr3 39952287 39952841 + 0.301029995663985 NA Intergenic Intergenic 570348 NR_040445 100040882 Mm.272869 NR_040445 ENSMUSG00000037884 1700017G19Rik - RIKEN cDNA 1700017G19 gene ncRNA common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985 chr1 31157380 31157879 + 0.301029995663985 NA intron (NR_033445, intron 2 of 2) B4|SINE|B4 -18806 NM_153601 266744 Mm.389093 NM_153601 ENSMUSG00000050217 Lgsn Gluld1|Lgs|lengsin lengsin, lens protein with glutamine synthetase domain protein-coding common_peak2_32_27_-0.0402889376598452_4.78721045322768_0.301029995663985-14 chr5 105779411 105779914 + 0.301029995663985 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) 78852 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985 chr1 160036743 160037064 + 0.301029995663985 NA Intergenic Intergenic -7477 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985-5 chr7 127904265 127904999 + 0.301029995663985 NA intron (NM_009739, intron 1 of 11) intron (NM_009739, intron 1 of 11) 559 NM_009739 12041 Mm.425495 NM_009739 ENSMUSG00000030802 Bckdk AI327402 branched chain ketoacid dehydrogenase kinase protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-10 chr17 36025475 36025805 + 0.301029995663985 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -5080 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak1_51_43_-0.0409484237554283_5.43895740675958_0.301029995663985 chr13 110923458 110924071 + 0.301029995663985 NA Intergenic Intergenic -19918 NR_131194 102636142 Mm.417611 NR_131194 4930526H09Rik - RIKEN cDNA 4930526H09 gene ncRNA common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-13 chr2 32427758 32428204 + 0.301029995663985 NA intron (NM_146118, intron 1 of 10) intron (NM_146118, intron 1 of 10) 3170 NM_001164358 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-15 chr4 128770301 128770673 + 0.301029995663985 NA Intergenic Intergenic 11229 NM_001009819 215493 Mm.300900 NM_001009819 ENSMUSG00000028794 A3galt2 Gm433|iGb3|iGb3S alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-20 chr8 25061980 25062408 + 0.301029995663985 NA intron (NM_031257, intron 5 of 11) intron (NM_031257, intron 5 of 11) -23232 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak2_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-2 chr1 74275532 74275775 + 0.301029995663985 NA Intergenic Intergenic -2947 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak1_21_18_-0.0616971312732808_4.21707894780694_0.301029995663985-9 chr15 75842192 75842479 + 0.301029995663985 NA promoter-TSS (NM_172121) promoter-TSS (NM_172121) -427 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-21 chr5 114942295 114942564 + 0.301029995663984 NA intron (NM_028211, intron 1 of 5) CpG 227 NM_028211 72357 Mm.292672 NM_028211 ENSMUSG00000029559 2210016L21Rik - RIKEN cDNA 2210016L21 gene protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-3 chr11 116319749 116320052 + 0.301029995663984 NA Intergenic Intergenic -13150 NM_001347636 53413 Mm.22530 NM_016857 ENSMUSG00000020792 Exoc7 Exo70|sec70 exocyst complex component 7 protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-15 chr7 90094153 90094363 + 0.301029995663984 NA Intergenic Intergenic 35216 NR_046006 78329 Mm.389940 NR_046006 ENSMUSG00000097162 2310010J17Rik - RIKEN cDNA 2310010J17 gene ncRNA common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-28 chr9 92265756 92266108 + 0.301029995663984 NA intron (NM_011636, intron 5 of 8) intron (NM_011636, intron 5 of 8) 1429 NR_105808 102465203 NR_105808 ENSMUSG00000098766 Mir6386 Gm27842|mmu-mir-6386 microRNA 6386 ncRNA common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-14 chr6 125039891 125040244 + 0.301029995663984 NA intron (NM_133345, intron 1 of 7) intron (NM_133345, intron 1 of 7) 219 NM_133345 28019 Mm.262547 NM_133345 ENSMUSG00000030330 Ing4 D6Wsu147e|D6Xrf92|p29ING4 inhibitor of growth family, member 4 protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-8 chr16 11063015 11063310 + 0.301029995663984 NA Intergenic Intergenic -3136 NM_009223 20621 Mm.325800 NM_009223 ENSMUSG00000037972 Snn 2810407J07Rik|AI848521|AW547286 stannin protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-4 chr15 101370625 101370836 + 0.301029995663984 NA promoter-TSS (NM_028770) promoter-TSS (NM_028770) -605 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-6 chr19 32906010 32906482 + 0.301029995663984 NA Intergenic UCON26|Unknown|Unknown 148669 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-12 chr19 46459019 46459350 + 0.301029995663984 NA intron (NM_001025391, intron 8 of 11) intron (NM_001025391, intron 8 of 11) -42464 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-4 chr11 33747526 33747839 + 0.301029995663984 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) 95903 NM_027398 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-13 chr5 72854478 72854702 + 0.301029995663984 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 13858 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-10 chr4 103113916 103114137 + 0.301029995663984 NA promoter-TSS (NM_001286222) promoter-TSS (NM_001286222) 273 NM_146254 242584 Mm.374877 NM_146254 ENSMUSG00000035126 Wdr78 BC028975 WD repeat domain 78 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-2 chr10 82178387 82178617 + 0.301029995663984 NA Intergenic CpG 50489 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-3 chr10 93501576 93501998 + 0.301029995663984 NA intron (NM_010401, intron 14 of 19) intron (NM_010401, intron 14 of 19) 13019 NM_010401 15109 Mm.13000 NM_010401 ENSMUSG00000020017 Hal Hsd|his|histidase histidine ammonia lyase protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-7 chr12 25628602 25628918 + 0.301029995663984 NA Intergenic Intergenic 499586 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-9 chr14 69327533 69327840 + 0.301029995663984 NA Intergenic Intergenic 9451 NR_045091 100504477 Mm.396396 NR_045091 ENSMUSG00000097511 Gm16677 - predicted gene, 16677 ncRNA unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-3 chr13 99057521 99057827 + 0.301029995663984 NA Intergenic Intergenic 30247 NR_045495 69603 Mm.390632 NR_045495 ENSMUSG00000100410 2310020H05Rik - RIKEN cDNA 2310020H05 gene ncRNA common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-15 chr9 23166976 23167268 + 0.301029995663984 NA Intergenic Intergenic -55954 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator protein-coding unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-7 chr2 168525199 168525495 + 0.301029995663984 NA intron (NM_001037177, intron 5 of 6) intron (NM_001037177, intron 5 of 6) 65018 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-19 chr3 152265403 152265671 + 0.301029995663984 NA intron (NM_199465, intron 1 of 12) CpG 258 NM_001357206 68810 Mm.200188 NM_199465 ENSMUSG00000039103 Nexn 1110046H09Rik|AA553326|NELIN nexilin protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-7 chr15 76008090 76008334 + 0.301029995663984 NA intron (NM_134087, intron 1 of 4) intron (NM_134087, intron 1 of 4) 1286 NM_001168253 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-4 chr11 100287017 100287577 + 0.301029995663984 NA Intergenic Intergenic -17426 NM_212483 68239 Mm.158190 NM_212483 ENSMUSG00000053654 Krt42 2410039E07Rik|K17n|Ka22|ecat6 keratin 42 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-7 chr17 21733389 21733784 + 0.301029995663984 NA promoter-TSS (NM_001164676) promoter-TSS (NM_001164676) -138 NM_001164676 381067 Mm.482723 NM_001164676 ENSMUSG00000061544 Zfp229 - zinc finger protein 229 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-23 chr6 52209681 52210029 + 0.301029995663984 NA intron (NR_015611, intron 1 of 2) intron (NR_015611, intron 1 of 2) -1133 NM_010454 15403 Mm.222030 NM_010454 ENSMUSG00000043219 Hoxa6 Hox-1.2 homeobox A6 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-6 chr2 163815140 163815341 + 0.301029995663984 NA Intergenic Intergenic -5594 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-3 chr17 26514434 26514694 + 0.301029995663984 NA Intergenic Intergenic -6092 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-11 chr4 133941173 133941722 + 0.301029995663984 NA Intergenic Intergenic 26544 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-6 chr11 86907147 86907544 + 0.301029995663984 NA Intergenic Intergenic 86417 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee like 2 protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-2 chr11 116814999 116815289 + 0.301029995663984 NA intron (NM_001347633, intron 2 of 4) intron (NM_001347633, intron 2 of 4) 12902 NM_026280 67622 Mm.64962 NM_026280 ENSMUSG00000020814 Mxra7 1810057P16Rik|E130302J09Rik matrix-remodelling associated 7 protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-8 chr9 102973015 102973417 + 0.301029995663984 NA Intergenic Intergenic -35273 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-6 chr16 29734427 29734761 + 0.301029995663984 NA Intergenic Intergenic 155260 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-11 chr3 137623810 137624035 + 0.301029995663984 NA intron (NM_030143, intron 1 of 2) intron (NM_030143, intron 1 of 2) 250 NM_030143 73284 Mm.250841 NM_030143 ENSMUSG00000046818 Ddit4l 1700037B15Rik|1700108M02Rik|REDD2|RTP801L|Smhs1 DNA-damage-inducible transcript 4-like protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-9 chr17 8282911 8283209 + 0.301029995663984 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -753 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-26 chr9 21167408 21167740 + 0.301029995663984 NA intron (NM_183408, intron 1 of 14) intron (NM_183408, intron 1 of 14) 1860 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-8 chr3 107765194 107765426 + 0.301029995663984 NA Intergenic Intergenic -4841 NM_001113529 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-6 chr16 87383489 87383763 + 0.301029995663984 NA intron (NM_001081068, intron 25 of 29) intron (NM_001081068, intron 25 of 29) 29441 NM_026366 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-6 chr3 122922337 122922675 + 0.301029995663984 NA intron (NR_046036, intron 1 of 5) intron (NR_046036, intron 1 of 5) 1610 NR_046036 74057 Mm.159123 NR_046036 ENSMUSG00000097852 4933405D12Rik - RIKEN cDNA 4933405D12 gene ncRNA common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-14 chr17 36931492 36931798 + 0.301029995663984 NA intron (NR_045439, intron 2 of 2) intron (NR_045439, intron 2 of 2) 7853 NR_045439 73286 Mm.426884 NR_045439 ENSMUSG00000092239 1700031A10Rik - RIKEN cDNA 1700031A10 gene ncRNA common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-17 chr9 78442589 78442964 + 0.301029995663984 NA exon (NM_173386, exon 1 of 5) exon (NM_173386, exon 1 of 5) 461 NR_125721 214763 Mm.101559 NM_173386 ENSMUSG00000032344 Mb21d1 E330016A19Rik|cGAS Mab-21 domain containing 1 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-4 chr12 3807324 3807853 + 0.301029995663984 NA intron (NM_001271753, intron 1 of 22) intron (NM_001271753, intron 1 of 22) 428 NM_001271753 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-5 chr19 6256162 6256454 + 0.301029995663984 NA exon (NM_194348, exon 29 of 40) exon (NM_194348, exon 29 of 40) -8335 NR_029830 723957 NR_029830 ENSMUSG00000065582 Mir194-2 Mirn194-2|mir-194-2 microRNA 194-2 ncRNA unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-5 chr14 18893050 18893373 + 0.301029995663984 NA intron (NM_001360327, intron 1 of 5) intron (NM_001360327, intron 1 of 5) 202 NM_001360328 218793 Mm.23551 NM_144839 ENSMUSG00000058317 Ube2e2 BC016265 ubiquitin-conjugating enzyme E2E 2 protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-14 chr7 49245630 49245896 + 0.301029995663984 NA promoter-TSS (NM_175272) promoter-TSS (NM_175272) -426 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-9 chr9 118800754 118801335 + 0.301029995663984 NA intron (NM_001113514, intron 3 of 13) intron (NM_001113514, intron 3 of 13) 89352 NM_001113514 104099 Mm.335520 NM_133721 ENSMUSG00000039115 Itga9 (alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e integrin alpha 9 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984 chr1 9967752 9968098 + 0.301029995663984 NA promoter-TSS (NM_001285425) promoter-TSS (NM_001285425) -440 NM_001285425 100039596 Mm.412928 NM_001285425 ENSMUSG00000099032 Tcf24 Gm10567|Gm2330 transcription factor 24 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-17 chr2 152343177 152343409 + 0.301029995663984 NA exon (NM_175093, exon 2 of 4) exon (NM_175093, exon 2 of 4) 767 NM_175093 228775 Mm.276018 NM_144554 ENSMUSG00000032715 Trib3 Ifld2|Nipk|SINK|SKIP3|TRB-3|Trb3 tribbles pseudokinase 3 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984 chr1 136227110 136227382 + 0.301029995663984 NA intron (NM_028872, intron 2 of 9) intron (NM_028872, intron 2 of 9) 7034 NM_028872 67313 Mm.36763 NM_028872 ENSMUSG00000041605 5730559C18Rik 1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54|Inava RIKEN cDNA 5730559C18 gene protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-10 chr16 6888978 6889226 + 0.301029995663984 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -150268 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-9 chr19 18345224 18345540 + 0.301029995663984 NA Intergenic Intergenic 286431 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-12 chr4 149049282 149049493 + 0.301029995663984 NA intron (NM_019781, intron 2 of 8) intron (NM_019781, intron 2 of 8) 50425 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-22 chr6 50394710 50394918 + 0.301029995663984 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -11977 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-13 chr6 92463204 92463557 + 0.301029995663984 NA intron (NM_001081146, intron 2 of 8) (CA)n|Simple_repeat|Simple_repeat 18012 NM_001134460 243548 Mm.248820 NM_001081146 ENSMUSG00000030020 Prickle2 6230400G14Rik|6720451F06Rik|mpk2 prickle planar cell polarity protein 2 protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-4 chr14 76521017 76521227 + 0.301029995663984 NA promoter-TSS (NR_045660) promoter-TSS (NR_045660) -267 NR_045660 75789 Mm.159571 NR_045660 ENSMUSG00000097172 4930444M15Rik - RIKEN cDNA 4930444M15 gene ncRNA common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-8 chr12 69502782 69503029 + 0.301029995663984 NA Intergenic Intergenic -27355 NR_038060 76062 Mm.380755 NR_038060 ENSMUSG00000113035 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-4 chr15 98050158 98050463 + 0.301029995663984 NA intron (NM_144851, intron 13 of 17) intron (NM_144851, intron 13 of 17) -42279 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-3 chr11 78372591 78372837 + 0.301029995663984 NA intron (NM_008238, intron 1 of 8) intron (NM_008238, intron 1 of 8) 13894 NM_008238 15218 Mm.4496 NM_008238 ENSMUSG00000002057 Foxn1 D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude forkhead box N1 protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-2 chr13 67483934 67484426 + 0.301029995663984 NA promoter-TSS (NM_001076791) promoter-TSS (NM_001076791) 73 NM_001076791 408067 Mm.315879 NM_001076791 ENSMUSG00000059839 Zfp874b 9630025I21Rik|Rslcan16 zinc finger protein 874b protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-24 chr7 116203072 116203310 + 0.301029995663984 NA intron (NM_001305185, intron 3 of 26) intron (NM_001305185, intron 3 of 26) -4630 NM_001305189 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-18 chrX 77511186 77511522 + 0.301029995663984 NA intron (NM_020601, intron 1 of 15) CpG 127 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-12 chr5 72864220 72864566 + 0.301029995663984 NA intron (NM_013689, intron 1 of 17) intron (NM_013689, intron 1 of 17) 4055 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-5 chr19 44930631 44930845 + 0.301029995663984 NA promoter-TSS (NM_001081225) promoter-TSS (NM_001081225) -381 NM_172638 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Slf2 3632432H19|Fam178a SMC5-SMC6 complex localization factor 2 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-8 chr18 60680214 60680508 + 0.301029995663984 NA Intergenic Intergenic 16951 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-16 chr19 12488794 12489145 + 0.301029995663984 NA intron (NM_172442, intron 2 of 8) intron (NM_172442, intron 2 of 8) 13027 NM_172442 207521 Mm.247695 NM_172442 ENSMUSG00000039982 Dtx4 AI449438|BC044798|D930042H13|RNF155 deltex 4, E3 ubiquitin ligase protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-3 chr15 37755863 37756222 + 0.301029995663984 NA intron (NM_001359841, intron 1 of 7) MTD|LTR|ERVL-MaLR -21411 NM_001359843 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-6 chr5 35032928 35033367 + 0.301029995663984 NA 3' UTR (NM_001163512, exon 14 of 14) 3' UTR (NM_001163512, exon 14 of 14) -8362 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-15 chr6 135251582 135252090 + 0.301029995663984 NA intron (NM_001080553, intron 1 of 5) intron (NM_001080553, intron 1 of 5) 2500 NM_010352 14840 Mm.272306 NM_010352 ENSMUSG00000030206 Gsg1 - germ cell associated 1 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-20 chr4 58197167 58197508 + 0.301029995663984 NA intron (NM_022814, intron 1 of 47) intron (NM_022814, intron 1 of 47) 9259 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984 chr1 34006869 34007126 + 0.301029995663984 NA intron (NM_001276764, intron 4 of 102) intron (NM_001276764, intron 4 of 102) -4828 NM_133833 13518 Mm.336625 NM_010081 ENSMUSG00000026131 Dst 2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339 dystonin protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-2 chr13 94134924 94135224 + 0.301029995663984 NA intron (NM_172589, intron 2 of 3) intron (NM_172589, intron 2 of 3) 77278 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-16 chr7 116457447 116458013 + 0.301029995663984 NA Intergenic MER34A1|LTR|ERV1 -14272 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-27 chr9 64068178 64068712 + 0.301029995663984 NA Intergenic Intergenic -12316 NR_040743 76814 Mm.243771 NR_040743 Scarletltr 2600006L11Rik Scarletltr, erythroid developmental long intergenic non-protein coding transcript ncRNA common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-2 chr11 116103330 116103784 + 0.301029995663984 NA Intergenic RSINE1|SINE|B4 6678 NM_001205081 217333 Mm.347770 NM_172570 ENSMUSG00000020773 Trim47 2210023F24Rik tripartite motif-containing 47 protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-9 chr9 103039915 103040333 + 0.301029995663984 NA intron (NM_033314, intron 1 of 13) intron (NM_033314, intron 1 of 13) 31635 NM_033314 24059 Mm.207106 NM_033314 ENSMUSG00000032548 Slco2a1 2310021C19Rik|Pgt|Slc21a2|mPgt solute carrier organic anion transporter family, member 2a1 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-12 chr16 56717728 56718003 + 0.301029995663984 NA promoter-TSS (NM_001252443) promoter-TSS (NM_001252443) -415 NM_001357126 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-6 chr14 77197273 77197460 + 0.301029995663984 NA intron (NM_001253759, intron 1 of 19) intron (NM_001253759, intron 1 of 19) 40603 NM_172813 239188 Mm.441158 NM_172813 ENSMUSG00000022012 Enox1 B230207J08|D230005D02Rik ecto-NOX disulfide-thiol exchanger 1 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-3 chr10 120718536 120718823 + 0.301029995663984 NA Intergenic Intergenic -47053 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-3 chr14 59441093 59441450 + 0.301029995663984 NA promoter-TSS (NM_001320725) promoter-TSS (NM_001320725) 308 NM_001360592 69008 Mm.179091 NM_026908 ENSMUSG00000021981 Cab39l 1500031K13Rik|2810425O13Rik|4930520C08Rik|AA589432|MO2L calcium binding protein 39-like protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-9 chr3 121605432 121605782 + 0.301029995663984 NA Intergenic Intergenic 37878 NR_036456 100503044 Mm.65320 NM_176992 ENSMUSG00000044522 A730020M07Rik - RIKEN cDNA A730020M07 gene ncRNA unique_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-7 chr8 34810648 34810920 + 0.301029995663984 NA intron (NM_176933, intron 1 of 3) intron (NM_176933, intron 1 of 3) 3174 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-10 chr8 121634286 121634581 + 0.301029995663984 NA intron (NM_080855, intron 1 of 12) intron (NM_080855, intron 1 of 12) 17500 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-2 chr10 44861230 44861629 + 0.301029995663984 NA Intergenic Intergenic -205785 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-13 chr6 128030044 128030377 + 0.301029995663984 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 113368 NM_175414 109246 Mm.21814 NM_175414 ENSMUSG00000030352 Tspan9 6720474K14Rik|9430079M16Rik|AU018597|Tspan-9 tetraspanin 9 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-16 chr8 25818971 25819243 + 0.301029995663984 NA intron (NM_001359012, intron 14 of 16) intron (NM_001359012, intron 14 of 16) 10633 NM_011485 20845 Mm.293314 NM_011485 ENSMUSG00000031574 Star AV363654|D8Ertd419e|stARD1 steroidogenic acute regulatory protein protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-15 chr18 75449735 75449971 + 0.301029995663984 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -64792 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-5 chr16 4213008 4213318 + 0.301029995663984 NA exon (NM_001025432, exon 1 of 31) exon (NM_001025432, exon 1 of 31) 241 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-4 chr17 73068294 73068586 + 0.301029995663984 NA Intergenic Intergenic -39545 NM_001177968 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984 chr1 152089681 152090161 + 0.301029995663984 NA intron (NM_197990, intron 1 of 5) CpG 399 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik RIKEN cDNA 1700025G04 gene protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-18 chr3 98110942 98111257 + 0.301029995663984 NA intron (NM_010928, intron 12 of 33) intron (NM_010928, intron 12 of 33) -49535 NM_027665 71078 Mm.50711 NM_027665 ENSMUSG00000043468 Adam30 4933424D07Rik|svph4 a disintegrin and metallopeptidase domain 30 protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-2 chr13 22040882 22041311 + 0.301029995663984 NA exon (NM_175656, exon 1 of 1) exon (NM_175656, exon 1 of 1) 266 NM_175656 319158 Mm.14775 NM_175656 ENSMUSG00000060639 Hist1h4i - histone cluster 1, H4i protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-2 chr1 75495529 75495849 + 0.301029995663984 NA TTS (NM_001310679) TTS (NM_001310679) 10763 NM_178884 98733 Mm.236454 NM_178884 ENSMUSG00000026211 Obsl1 AW822216 obscurin-like 1 protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-8 chr2 168081554 168081784 + 0.301029995663984 NA intron (NM_021409, intron 1 of 2) intron (NM_021409, intron 1 of 2) 665 NM_021409 58220 Mm.292834 NM_021409 ENSMUSG00000044641 Pard6b AV025615|Par6b par-6 family cell polarity regulator beta protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-10 chr17 22225422 22225648 + 0.301029995663984 NA promoter-TSS (NM_001205095) promoter-TSS (NM_001205095) 79 NM_001205095 240038 Mm.227945 NM_001205095 ENSMUSG00000096433 Zfp994 EG240038|Gm4944 zinc finger protein 994 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-7 chr3 89227736 89227964 + 0.301029995663984 NA promoter-TSS (NR_030579) promoter-TSS (NR_030579) -652 NR_030579 100124470 NR_030579 ENSMUSG00000076255 Mir92b Mirn92b|mir-92b|mmu-mir-92b microRNA 92b ncRNA unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-8 chr8 111991842 111992206 + 0.301029995663984 NA intron (NM_001357185, intron 1 of 8) intron (NM_001357185, intron 1 of 8) 278 NM_001357184 30947 Mm.282162 NM_013925 ENSMUSG00000031949 Adat1 MMADAT1 adenosine deaminase, tRNA-specific 1 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-11 chr16 11013005 11013230 + 0.301029995663984 NA intron (NR_040518, intron 2 of 2) intron (NR_040518, intron 2 of 2) 4219 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-14 chr6 99094713 99095040 + 0.301029995663984 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -66578 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-5 chr13 102014640 102015050 + 0.301029995663984 NA Intergenic Intergenic -246628 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphoinositide-3-kinase regulatory subunit 1 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984 chr10 41302754 41303149 + 0.301029995663984 NA intron (NM_133999, intron 1 of 22) CpG 290 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-4 chr11 118162487 118162929 + 0.301029995663984 NA Intergenic ORR1F|LTR|ERVL-MaLR -33489 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-10 chr2 102899616 102899825 + 0.301029995663984 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 1945 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-11 chr18 75505401 75505604 + 0.301029995663984 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -9143 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-5 chr11 60308499 60308719 + 0.301029995663984 NA intron (NM_001359810, intron 1 of 12) intron (NM_001359810, intron 1 of 12) 44296 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-5 chr18 67980895 67981299 + 0.301029995663984 NA intron (NM_172631, intron 1 of 5) Tigger5b|DNA|TcMar-Tigger 47924 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984 chr1 10039831 10040060 + 0.301029995663984 NA intron (NM_026493, intron 1 of 29) CpG 1727 NM_026493 211660 Mm.244046 NM_026493 ENSMUSG00000056763 Cspp1 2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3 centrosome and spindle pole associated protein 1 protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984-7 chr2 6379424 6379617 + 0.301029995663984 NA intron (NM_181399, intron 1 of 13) intron (NM_181399, intron 1 of 13) 26784 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984 chr1 64825995 64826377 + 0.301029995663984 NA intron (NM_001039493, intron 6 of 7) intron (NM_001039493, intron 6 of 7) -88436 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-7 chr4 155843729 155844246 + 0.301029995663984 NA 3' UTR (NM_024263, exon 10 of 10) 3' UTR (NM_024263, exon 10 of 10) -3415 NM_010091 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-25 chr8 124317088 124317314 + 0.301029995663984 NA intron (NM_139272, intron 3 of 15) intron (NM_139272, intron 3 of 15) 85807 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-9 chr4 54773006 54773261 + 0.301029995663984 NA Intergenic Intergenic -174812 NM_172867 242466 Mm.102904 NM_172867 ENSMUSG00000060206 Zfp462 6030417H05|9430078C22Rik|Gt4-2|Zfpip zinc finger protein 462 protein-coding unique_peak1_20_17_-0.0503353258496881_4.14475733851747_0.301029995663984 chr11 102604492 102604865 + 0.301029995663984 NA 5' UTR (NM_020510, exon 1 of 1) 5' UTR (NM_020510, exon 1 of 1) 247 NM_020510 57265 Mm.36416 NM_020510 ENSMUSG00000050288 Fzd2 AL033370|AW456835|Fz10|Fzd10|Mfz10|Mfz10a frizzled class receptor 2 protein-coding unique_peak1_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-5 chr3 121699430 121699751 + 0.301029995663984 NA Intergenic Intergenic -23947 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak2_19_17_-0.120228058470638_4.10981097220699_0.301029995663984-13 chr17 22225390 22225615 + 0.301029995663984 NA intron (NM_001205095, intron 1 of 4) intron (NM_001205095, intron 1 of 4) 112 NM_001205095 240038 Mm.227945 NM_001205095 ENSMUSG00000096433 Zfp994 EG240038|Gm4944 zinc finger protein 994 protein-coding common_peak1_62_52_-0.0345501563163646_5.71064537640502_0.301029995663982 chr11 106066142 106066876 + 0.301029995663982 NA exon (NM_027346, exon 1 of 5) exon (NM_027346, exon 1 of 5) 402 NM_027346 70207 Mm.343857 NM_027346 ENSMUSG00000001983 Taco1 2310066I18Rik|Ccdc44 translational activator of mitochondrially encoded cytochrome c oxidase I protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982 chr1 93802235 93802583 + 0.301029995663982 NA promoter-TSS (NM_023136) promoter-TSS (NM_023136) -475 NM_001105667 21915 Mm.250332 NM_023136 ENSMUSG00000026281 Dtymk AU044245|CDC8|D10Ertd203e|TMPK|TYPK|Tmk|mtmk deoxythymidylate kinase protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982 chr1 90770693 90770893 + 0.301029995663982 NA intron (NM_001243009, intron 39 of 40) intron (NM_001243009, intron 39 of 40) 73178 NM_001243008 12835 Mm.7562 NM_009935 ENSMUSG00000048126 Col6a3 AI507288|Col6a-3 collagen, type VI, alpha 3 protein-coding common_peak2_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-3 chr16 23419974 23420693 + 0.301029995663982 NA Intergenic Intergenic -8800 NM_001004151 239766 Mm.208751 NM_001004151 ENSMUSG00000033383 Rtp1 Gm1766|Gm604 receptor transporter protein 1 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-5 chr16 15294001 15294384 + 0.301029995663982 NA Intergenic Intergenic 300326 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak2_54_45_-0.024729654706074_5.51119712870398_0.301029995663982-4 chr6 83830788 83831578 + 0.301029995663982 NA intron (NM_146169, intron 2 of 4) intron (NM_146169, intron 2 of 4) 558 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-11 chr14 101798432 101798678 + 0.301029995663982 NA intron (NM_201529, intron 2 of 30) intron (NM_201529, intron 2 of 30) -42068 NM_001347628 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-24 chr6 134641125 134641336 + 0.301029995663982 NA exon (NM_026371, exon 1 of 4) exon (NM_026371, exon 1 of 4) 290 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-3 chr1 189889335 189889666 + 0.301029995663982 NA intron (NM_026796, intron 6 of 11) intron (NM_026796, intron 6 of 11) 32791 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-11 chr8 64540261 64540523 + 0.301029995663982 NA Intergenic Intergenic -25951 NR_030491 735270 NR_030491 ENSMUSG00000076042 Mir710 Mirn710|mmu-mir-710 microRNA 710 ncRNA unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-8 chr3 97946951 97947261 + 0.301029995663982 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 16933 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak1_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-4 chr9 21238319 21239329 + 0.301029995663982 NA 5' UTR (NM_016679, exon 1 of 5) 5' UTR (NM_016679, exon 1 of 5) 508 NM_016679 50868 Mm.248266 NM_016679 ENSMUSG00000003308 Keap1 INRF2|mKIAA0132 kelch-like ECH-associated protein 1 protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-6 chr16 20426244 20426633 + 0.301029995663982 NA promoter-TSS (NM_013790) promoter-TSS (NM_013790) -44 NM_176839 27416 Mm.20845 NM_013790 ENSMUSG00000022822 Abcc5 2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-10 chr2 113375981 113376185 + 0.301029995663982 NA intron (NM_001285458, intron 2 of 16) intron (NM_001285458, intron 2 of 16) 48347 NM_010230 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-6 chr8 68061807 68062265 + 0.301029995663982 NA Intergenic Intergenic -87462 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-4 chr18 70529895 70530137 + 0.301029995663982 NA 5' UTR (NM_001136090, exon 1 of 10) 5' UTR (NM_001136090, exon 1 of 10) 305 NM_001136090 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-14 chr15 59522843 59523201 + 0.301029995663982 NA intron (NM_026746, intron 4 of 6) intron (NM_026746, intron 4 of 6) -125632 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982 chr11 75653250 75653813 + 0.301029995663982 NA intron (NM_001080774, intron 1 of 31) intron (NM_001080774, intron 1 of 31) 1381 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak1_54_45_-0.024729654706074_5.51119712870398_0.301029995663982-2 chr14 33335111 33335700 + 0.301029995663982 NA intron (NM_153800, intron 4 of 10) intron (NM_153800, intron 4 of 10) 75619 NM_001310452 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-6 chr19 44742794 44743062 + 0.301029995663982 NA Intergenic Intergenic -14466 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982 chr1 9546427 9546745 + 0.301029995663982 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 1178 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-8 chr11 115277353 115277577 + 0.301029995663982 NA promoter-TSS (NM_007997) promoter-TSS (NM_007997) -496 NM_007997 14149 Mm.4719 NM_007997 ENSMUSG00000018861 Fdxr AR ferredoxin reductase protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-17 chr8 11801270 11801671 + 0.301029995663982 NA intron (NM_017402, intron 7 of 19) MIR|SINE|MIR -39051 NM_029326 75528 Mm.440342 NM_029326 ENSMUSG00000031512 Tex29 1700018L24Rik testis expressed 29 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-10 chr8 81865460 81865732 + 0.301029995663982 NA intron (NM_001024617, intron 8 of 24) intron (NM_001024617, intron 8 of 24) 523034 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_54_45_-0.024729654706074_5.51119712870398_0.301029995663982-3 chr5 35040671 35041498 + 0.301029995663982 NA promoter-TSS (NM_019447) promoter-TSS (NM_019447) -425 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-7 chr5 66374007 66374310 + 0.301029995663982 NA intron (NM_001310626, intron 8 of 15) intron (NM_001310626, intron 8 of 15) -36493 NM_001201416 11787 Mm.5159 NM_009686 ENSMUSG00000029207 Apbb2 2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra amyloid beta (A4) precursor protein-binding, family B, member 2 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-17 chr2 116064003 116064243 + 0.301029995663982 NA 5' UTR (NM_001346044, exon 1 of 14) 5' UTR (NM_001346044, exon 1 of 14) 496 NM_001346044 17536 Mm.247566 NM_010825 ENSMUSG00000027210 Meis2 A430109D20Rik|Mrg1|Stra10 Meis homeobox 2 protein-coding common_peak2_229_187_-0.00618861027399387_7.55149454654064_0.301029995663982 chr15 81398755 81400810 + 0.301029995663982 NA promoter-TSS (NM_001347075) promoter-TSS (NM_001347075) -88 NM_133726 70356 Mm.180337 NM_133726 ENSMUSG00000022403 St13 1110007I03Rik|3110002K08Rik|AW555194|HIP|HOP|HSPABP|HSPABP1|PRO0786|SNC6|p48 suppression of tumorigenicity 13 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-2 chr10 24374064 24374422 + 0.301029995663982 NA Intergenic Intergenic 150726 NM_021509 59012 Mm.285934 NM_021509 ENSMUSG00000020000 Moxd1 3230402N08Rik|MNCb-5203 monooxygenase, DBH-like 1 protein-coding common_peak2_54_45_-0.024729654706074_5.51119712870398_0.301029995663982 chr15 50888639 50889260 + 0.301029995663982 NA promoter-TSS (NM_001310485) promoter-TSS (NM_001310485) 100 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e transcriptional repressor GATA binding 1 protein-coding common_peak2_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-2 chr15 80053500 80054131 + 0.301029995663982 NA Intergenic Intergenic 24764 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-3 chr15 80052063 80052743 + 0.301029995663982 NA Intergenic Intergenic 26176 NR_028282 100302601 NR_028282 ENSMUSG00000077734 Snord83b MBII-10 small nucleolar RNA, C/D box 83B snoRNA common_peak1_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982 chr13 52024538 52025302 + 0.301029995663982 NA Intergenic Intergenic -71821 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak1_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-3 chr2 31688340 31689005 + 0.301029995663982 NA promoter-TSS (NR_153862) promoter-TSS (NR_153862) 135 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982 chr11 58331224 58331735 + 0.301029995663982 NA 5' UTR (NM_001161338, exon 2 of 7) 5' UTR (NM_001161338, exon 2 of 7) 689 NM_001308168 79566 Mm.290534 NM_024480 ENSMUSG00000013646 Sh3bp5l 2310074E09Rik|BC003251|mKIAA1720 SH3 binding domain protein 5 like protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-4 chr10 66354558 66354779 + 0.301029995663982 NA Intergenic Intergenic 209372 NR_131070 77198 Mm.107617 NR_131070 ENSMUSG00000112210 4930407I19Rik - RIKEN cDNA 4930407I19 gene ncRNA common_peak2_108_89_-0.0131582112012287_6.48527399072906_0.301029995663982 chr11 61578243 61579394 + 0.301029995663982 NA intron (NM_001252188, intron 1 of 10) intron (NM_001252188, intron 1 of 10) 869 NM_010148 13855 Mm.139695 NM_010148 ENSMUSG00000001036 Epn2 9530051D10Rik|AA536924|Ibp2 epsin 2 protein-coding common_peak1_62_52_-0.0345501563163646_5.71064537640502_0.301029995663982-3 chr19 57452939 57453731 + 0.301029995663982 NA intron (NM_029839, intron 1 of 6) intron (NM_029839, intron 1 of 6) 429 NM_028115 72133 Mm.258404 NM_028115 ENSMUSG00000025086 Trub1 2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870 TruB pseudouridine (psi) synthase family member 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-9 chr13 67375376 67375682 + 0.301029995663982 NA intron (NM_001001186, intron 1 of 3) intron (NM_001001186, intron 1 of 3) 234 NM_001001186 408065 Mm.461583 NM_001001186 ENSMUSG00000078995 Zfp456 BC065418|Rslcan-13 zinc finger protein 456 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-12 chr15 4027131 4027360 + 0.301029995663982 NA non-coding (NR_028266, exon 1 of 2) non-coding (NR_028266, exon 1 of 2) 161 NR_028266 414066 Mm.394461 NR_028266 BC037032 - cDNA Sequence BC037032 ncRNA common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-5 chr16 8665679 8665949 + 0.301029995663982 NA intron (NM_025821, intron 1 of 3) intron (NM_025821, intron 1 of 3) 6339 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-21 chr4 55732451 55732777 + 0.301029995663982 NA Intergenic Intergenic -200139 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-6 chr3 101048607 101049080 + 0.301029995663982 NA intron (NM_011197, intron 7 of 8) intron (NM_011197, intron 7 of 8) -19348 NM_001167906 630146 Mm.190915 NM_001099332 ENSMUSG00000086564 Cd101 EWI-101|Gm1016|Gm734|Igsf2 CD101 antigen protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-11 chr3 68492148 68492463 + 0.301029995663982 NA intron (NM_001282045, intron 1 of 7) intron (NM_001282045, intron 1 of 7) -1876 NM_001282044 30953 Mm.331064 NM_013928 ENSMUSG00000027777 Schip1 Nf2ip|Schip-1 schwannomin interacting protein 1 protein-coding common_peak2_54_45_-0.024729654706074_5.51119712870398_0.301029995663982-5 chr7 131410007 131410506 + 0.301029995663982 NA promoter-TSS (NM_025826) promoter-TSS (NM_025826) 222 NM_175115 67143 Mm.334273 NM_175115 ENSMUSG00000040167 Ikzf5 2610034F18Rik|PEGASUS|Zfpn1a5 IKAROS family zinc finger 5 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-7 chr2 157373400 157373689 + 0.301029995663982 NA intron (NM_026968, intron 1 of 2) intron (NM_026968, intron 1 of 2) 5950 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding common_peak2_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-5 chr3 31021263 31022106 + 0.301029995663982 NA intron (NM_008857, intron 2 of 17) intron (NM_008857, intron 2 of 17) -17282 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak2_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-3 chr16 57683072 57684250 + 0.301029995663982 NA intron (NM_007739, intron 1 of 3) intron (NM_007739, intron 1 of 3) 71076 NM_007739 12837 Mm.130388 NM_007739 ENSMUSG00000068196 Col8a1 Col8a-1 collagen, type VIII, alpha 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-10 chr14 69614393 69614733 + 0.301029995663982 NA intron (NM_033325, intron 1 of 13) intron (NM_033325, intron 1 of 13) 5087 NM_033325 94352 Mm.116714 NM_033325 ENSMUSG00000034205 Loxl2 1110004B06Rik|4930526G11Rik|9430067E15Rik lysyl oxidase-like 2 protein-coding common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-4 chr4 152008109 152008696 + 0.301029995663982 NA promoter-TSS (NM_001033352) promoter-TSS (NM_001033352) -489 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-5 chr17 84184060 84184632 + 0.301029995663982 NA 3' UTR (NM_001001806, exon 2 of 2) 3' UTR (NM_001001806, exon 2 of 2) 3601 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-9 chrX 160390774 160391188 + 0.301029995663982 NA intron (NM_001079847, intron 1 of 26) intron (NM_001079847, intron 1 of 26) 291 NM_001290445 237175 Mm.213016 NM_178712 ENSMUSG00000031298 Adgrg2 AW212196|B830041D06Rik|Gpr64|Me6 adhesion G protein-coupled receptor G2 protein-coding common_peak1_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982 chr15 10469900 10470441 + 0.301029995663982 NA intron (NM_030046, intron 1 of 11) CpG 346 NM_030046 78244 Mm.297862 NM_030046 ENSMUSG00000044224 Dnajc21 4930461P20Rik|9930116P15Rik DnaJ heat shock protein family (Hsp40) member C21 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-5 chr10 127069507 127069829 + 0.301029995663982 NA promoter-TSS (NR_040660) promoter-TSS (NR_040660) 593 NM_025982 67125 Mm.35650 NM_025982 ENSMUSG00000006736 Tspan31 2700085A14Rik|AW742554|Sas tetraspanin 31 protein-coding common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-2 chr15 77821582 77822356 + 0.301029995663982 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 20206 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_70_58_-0.0180223076551105_5.87363189553429_0.301029995663982 chr19 31083012 31083455 + 0.301029995663982 NA exon (NM_031249, exon 1 of 1) exon (NM_031249, exon 1 of 1) 392 NM_031249 83410 Mm.22031 NM_031249 ENSMUSG00000053536 Cstf2t 64kDa|C77975|tCstF-64|tauCstF-64 cleavage stimulation factor, 3' pre-RNA subunit 2, tau protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-8 chr7 126898427 126898760 + 0.301029995663982 NA promoter-TSS (NM_028389) promoter-TSS (NM_028389) -315 NM_028389 68742 Mm.248646 NM_026827 ENSMUSG00000060538 Tmem219 1110032O16Rik|2900045G02Rik|IGFBP-3R transmembrane protein 219 protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982 chr11 29172085 29172382 + 0.301029995663982 NA promoter-TSS (NM_134034) promoter-TSS (NM_134034) -674 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Ppp4r3b AW011752|AW557776|Smek2|mKIAA1387 protein phosphatase 4 regulatory subunit 3B protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-4 chr13 51888518 51888812 + 0.301029995663982 NA Intergenic Intergenic 41990 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-12 chr5 126538418 126538773 + 0.301029995663982 NA Intergenic Intergenic -492194 NR_040685 71247 Mm.399586 NR_040685 ENSMUSG00000105490 4933438B17Rik - RIKEN cDNA 4933438B17 gene ncRNA common_peak1_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-3 chr6 145769042 145769875 + 0.301029995663982 NA Intergenic Intergenic -38925 NM_027760 71323 Mm.158669 NM_027760 ENSMUSG00000030259 Rassf8 5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 protein-coding common_peak2_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-4 chr19 41933518 41933859 + 0.301029995663982 NA promoter-TSS (NM_001164561) promoter-TSS (NM_001164561) 243 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-7 chr17 46027396 46027619 + 0.301029995663982 NA intron (NM_001025250, intron 2 of 7) intron (NM_001025250, intron 2 of 7) -2344 NM_001110268 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-4 chr17 5849321 5849595 + 0.301029995663982 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 8078 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-4 chr15 74922229 74922576 + 0.301029995663982 NA Intergenic Intergenic -32649 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-7 chr11 72760205 72760502 + 0.301029995663982 NA exon (NM_009671, exon 22 of 25) exon (NM_009671, exon 22 of 25) 35486 NM_001024926 192986 Mm.194755 NM_001024926 ENSMUSG00000057778 Cyb5d2 9330151E16Rik|Gm2 cytochrome b5 domain containing 2 protein-coding common_peak2_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-5 chr7 19270105 19270874 + 0.301029995663982 NA intron (NM_009499, intron 1 of 12) intron (NM_009499, intron 1 of 12) 1365 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-18 chr2 152806622 152806878 + 0.301029995663982 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 21739 NR_149254 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-2 chr10 4074957 4075327 + 0.301029995663982 NA intron (NM_001170785, intron 20 of 27) B1_Mur1|SINE|Alu 102067 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak2_62_52_-0.0345501563163646_5.71064537640502_0.301029995663982-2 chr6 122819918 122820709 + 0.301029995663982 NA 5' UTR (NM_021899, exon 1 of 11) 5' UTR (NM_021899, exon 1 of 11) 129 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-3 chr16 30964015 30964432 + 0.301029995663982 NA intron (NM_198626, intron 3 of 3) intron (NM_198626, intron 3 of 3) 117209 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-23 chr5 135670074 135670346 + 0.301029995663982 NA Intergenic Intergenic -18935 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-8 chr5 110780156 110780387 + 0.301029995663982 NA exon (NM_019700, exon 1 of 6) exon (NM_019700, exon 1 of 6) 325 NM_019700 56361 Mm.23528 NM_019700 ENSMUSG00000029507 Pus1 A730013B20Rik|MPUS1|mPus1p pseudouridine synthase 1 protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-9 chr18 60648562 60648917 + 0.301029995663982 NA Intergenic Intergenic -14671 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-4 chr9 120492265 120493281 + 0.301029995663982 NA 5' UTR (NM_026892, exon 1 of 4) 5' UTR (NM_026892, exon 1 of 4) 167 NM_026892 68969 Mm.28753 NM_026892 ENSMUSG00000006941 Eif1b 1500010M16Rik|3110001N14Rik|Gc20 eukaryotic translation initiation factor 1B protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-13 chr6 106769458 106769734 + 0.301029995663982 NA intron (NM_001242358, intron 1 of 8) intron (NM_001242358, intron 1 of 8) 458 NM_001242360 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding common_peak2_70_58_-0.0180223076551105_5.87363189553429_0.301029995663982-2 chr5 124445657 124446458 + 0.301029995663982 NA promoter-TSS (NM_001310727) promoter-TSS (NM_001310727) 558 NM_001310723 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak2_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-6 chr7 28277722 28278487 + 0.301029995663982 NA exon (NM_001177427, exon 1 of 1) exon (NM_001177427, exon 1 of 1) 398 NM_001177427 434156 Mm.118535 NM_001177427 ENSMUSG00000070705 Eid2b 3010005C08Rik EP300 interacting inhibitor of differentiation 2B protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-14 chr7 45618839 45619057 + 0.301029995663982 NA exon (NM_008051, exon 2 of 2) exon (NM_008051, exon 2 of 2) 1342 NM_008051 14343 Mm.56933 NM_008051 ENSMUSG00000008461 Fut1 - fucosyltransferase 1 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-6 chr17 8128686 8129103 + 0.301029995663982 NA intron (NM_026611, intron 8 of 8) intron (NM_026611, intron 8 of 8) 18894 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-7 chr9 56937690 56938238 + 0.301029995663982 NA exon (NM_133976, exon 1 of 1) exon (NM_133976, exon 1 of 1) 464 NM_133976 102462 Mm.12864 NM_133976 ENSMUSG00000032288 Imp3 1190002L16Rik|AI256594 IMP3, U3 small nucleolar ribonucleoprotein protein-coding common_peak1_70_58_-0.0180223076551105_5.87363189553429_0.301029995663982-2 chr3 79989205 79989902 + 0.301029995663982 NA Intergenic Intergenic 103623 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding common_peak2_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-2 chr12 31271798 31272357 + 0.301029995663982 NA intron (NM_008482, intron 3 of 32) intron (NM_008482, intron 3 of 32) 6783 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding common_peak1_62_52_-0.0345501563163646_5.71064537640502_0.301029995663982-4 chr6 113624067 113624784 + 0.301029995663982 NA intron (NM_009507, intron 1 of 2) CpG 404 NM_009507 22346 Mm.29407 NM_009507 ENSMUSG00000033933 Vhl Vhlh von Hippel-Lindau tumor suppressor protein-coding common_peak1_54_45_-0.024729654706074_5.51119712870398_0.301029995663982 chr11 58978209 58979209 + 0.301029995663982 NA intron (NM_053168, intron 1 of 5) intron (NM_053168, intron 1 of 5) 616 NM_053168 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-2 chr12 99357094 99357598 + 0.301029995663982 NA intron (NM_183186, intron 2 of 5) intron (NM_183186, intron 2 of 5) 92728 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-9 chr6 70824685 70824924 + 0.301029995663982 NA Intergenic Intergenic -19711 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_54_45_-0.024729654706074_5.51119712870398_0.301029995663982-3 chr3 152193229 152193727 + 0.301029995663982 NA exon (NM_025926, exon 1 of 3) exon (NM_025926, exon 1 of 3) 367 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-3 chr16 20141151 20141512 + 0.301029995663982 NA intron (NM_001033237, intron 1 of 29) CpG 268 NM_001145930 208146 Mm.390895 NM_001033237 ENSMUSG00000041215 Yeats2 BC042768|mKIAA1197 YEATS domain containing 2 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-20 chr3 146405059 146405404 + 0.301029995663982 NA intron (NM_001253769, intron 1 of 13) intron (NM_001253769, intron 1 of 13) 589 NM_001355661 99167 Mm.200783 NM_138744 ENSMUSG00000036825 Ssx2ip AU014939|AU042321|Adip synovial sarcoma, X 2 interacting protein protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-8 chr17 86536178 86536382 + 0.301029995663982 NA intron (NM_011104, intron 10 of 14) intron (NM_011104, intron 10 of 14) -217584 NM_010137 13819 Mm.1415 NM_010137 ENSMUSG00000024140 Epas1 HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73 endothelial PAS domain protein 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-13 chr15 36189634 36190066 + 0.301029995663982 NA intron (NM_012031, intron 4 of 18) intron (NM_012031, intron 4 of 18) 10320 NM_012031 26942 Mm.295539 NM_012031 ENSMUSG00000037617 Spag1 tpis sperm associated antigen 1 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-9 chr8 46739177 46739525 + 0.301029995663982 NA promoter-TSS (NM_008391) promoter-TSS (NM_008391) 164 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-8 chr9 107702372 107703067 + 0.301029995663982 NA intron (NM_011349, intron 2 of 17) intron (NM_011349, intron 2 of 17) 2872 NM_001311151 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding common_peak1_143_118_-0.0172164737817271_6.88620952641708_0.301029995663982 chr9 54863731 54865243 + 0.301029995663982 NA intron (NM_022655, intron 1 of 21) intron (NM_022655, intron 1 of 21) 732 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding common_peak2_62_52_-0.0345501563163646_5.71064537640502_0.301029995663982 chr1 128103328 128104357 + 0.301029995663982 NA promoter-TSS (NM_001357573) promoter-TSS (NM_001357573) 536 NM_181750 226412 Mm.221041 NM_181750 ENSMUSG00000056211 R3hdm1 R3hdm R3H domain containing 1 protein-coding common_peak2_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982 chr1 184061760 184062524 + 0.301029995663982 NA intron (NM_022019, intron 2 of 3) ID_B1|SINE|B4 27761 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_70_58_-0.0180223076551105_5.87363189553429_0.301029995663982 chr16 33684323 33685256 + 0.301029995663982 NA exon (NM_175256, exon 1 of 15) exon (NM_175256, exon 1 of 15) 323 NM_175256 77446 Mm.245741 NM_172934 ENSMUSG00000075254 Heg1 4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629 heart development protein with EGF-like domains 1 protein-coding common_peak2_129_106_-0.0103818723386429_6.73627605023183_0.301029995663982-2 chr5 129787370 129788111 + 0.301029995663982 NA promoter-TSS (NM_133900) promoter-TSS (NM_133900) 384 NM_009838 12466 Mm.153159 NM_009838 Cct6a CCT-zeta|CCT-zeta-1|Cct6|Cctz-1|TCP-1-zeta chaperonin containing Tcp1, subunit 6a (zeta) protein-coding common_peak1_110_91_-0.0188205923453602_6.51415165988433_0.301029995663982 chr13 14063820 14064925 + 0.301029995663982 NA promoter-TSS (NM_001331176) promoter-TSS (NM_001331176) 588 NM_198122 94246 Mm.439784 NM_194262 ENSMUSG00000039219 Arid4b BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-15 chr7 51913302 51913559 + 0.301029995663982 NA intron (NM_001330607, intron 3 of 7) intron (NM_001330607, intron 3 of 7) 34463 NM_001330607 14453 Mm.207360 NM_008087 ENSMUSG00000030498 Gas2 Gas-2 growth arrest specific 2 protein-coding common_peak2_54_45_-0.024729654706074_5.51119712870398_0.301029995663982-2 chr19 27370360 27370802 + 0.301029995663982 NA Intergenic Intergenic 47962 NM_183179 240595 Mm.269759 NM_183179 ENSMUSG00000047298 Kcnv2 KV11.1 potassium channel, subfamily V, member 2 protein-coding common_peak1_55_46_-0.0299447374589574_5.53961648294816_0.301029995663982-2 chr2 156196728 156197654 + 0.301029995663982 NA intron (NM_172674, intron 1 of 17) CpG 544 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak2_129_106_-0.0103818723386429_6.73627605023183_0.301029995663982 chr12 55230123 55231373 + 0.301029995663982 NA intron (NM_001100109, intron 1 of 15).2 intron (NM_001100109, intron 1 of 15).2 270 NM_001100110 100101806 Mm.471968 NM_001100110 ENSMUSG00000079108 Srp54c E330029E12Rik signal recognition particle 54C protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-2 chr15 37753099 37753461 + 0.301029995663982 NA intron (NM_001359841, intron 1 of 7) intron (NM_001359841, intron 1 of 7) -18649 NM_001359843 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-25 chr7 113171918 113172236 + 0.301029995663982 NA Intergenic Intergenic -30062 NR_045978 75239 Mm.381688 NR_045978 ENSMUSG00000110009 4930543E12Rik 4930545H14Rik RIKEN cDNA 4930543E12 gene ncRNA common_peak2_144_118_-0.00730282275004157_6.89116635193292_0.301029995663982 chr7 45919439 45920624 + 0.301029995663982 NA exon (NM_010129, exon 3 of 5) exon (NM_010129, exon 3 of 5) 818 NM_001146346 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak2_222_182_-0.0115751652998259_7.50991225563413_0.301029995663982 chr5 3802121 3804013 + 0.301029995663982 NA promoter-TSS (NM_001289528) promoter-TSS (NM_001289528) 57 NM_001289528 70797 Mm.130148 NM_001003909 ENSMUSG00000040351 Ankib1 2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386 ankyrin repeat and IBR domain containing 1 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-3 chr11 76285033 76285234 + 0.301029995663982 NA intron (NM_008750, intron 1 of 7) intron (NM_008750, intron 1 of 7) 41397 NM_183263 67390 Mm.24886 NM_183263 ENSMUSG00000038046 Mrm3 4833420N02Rik|AI255153|HC90|Rnmtl1 mitochondrial rRNA methyltransferase 3 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-6 chr10 127500432 127500732 + 0.301029995663982 NA Intergenic Intergenic -1104 NM_001359751 237611 Mm.32087 NM_177707 ENSMUSG00000040287 Stac3 9830125E18 SH3 and cysteine rich domain 3 protein-coding common_peak1_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-2 chr2 30124223 30124977 + 0.301029995663982 NA promoter-TSS (NM_001290503) promoter-TSS (NM_001290503) 11 NM_178694 227693 Mm.44526 NM_178694 ENSMUSG00000039686 Zer1 C230075L19Rik|Zyg11bl zyg-11 related, cell cycle regulator protein-coding common_peak2_61_51_-0.0299901785883101_5.68544462884694_0.301029995663982-4 chr2 119156149 119156925 + 0.301029995663982 NA exon (NM_001033136, exon 2 of 13) exon (NM_001033136, exon 2 of 13) 497 NM_001033136 67809 Mm.475909 NM_001033136 ENSMUSG00000070730 Rmdn3 1200015F23Rik|AI131757|Fam82a2|Ptpip51|RMD-3|Rmd3 regulator of microtubule dynamics 3 protein-coding unique_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-10 chr8 54612399 54612670 + 0.301029995663982 NA Intergenic Intergenic 11753 NM_133711 69281 Mm.45833 NM_133711 ENSMUSG00000031518 Spata4 1700001N01Rik|Srg2|TSARG2 spermatogenesis associated 4 protein-coding unique_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-5 chr2 35461069 35461396 + 0.301029995663982 NA 5' UTR (NM_001145821, exon 1 of 8) 5' UTR (NM_001145821, exon 1 of 8) 217 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_62_52_-0.0345501563163646_5.71064537640502_0.301029995663982-2 chr18 36559269 36560219 + 0.301029995663982 NA promoter-TSS (NM_175375) promoter-TSS (NM_175375) -859 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-19 chr3 98044711 98045019 + 0.301029995663982 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 31327 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-22 chr4 100776722 100776938 + 0.301029995663982 NA 5' UTR (NM_198037, exon 1 of 27) 5' UTR (NM_198037, exon 1 of 27) 151 NM_198037 320508 Mm.151962 NM_198037 ENSMUSG00000028532 Cachd1 1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573 cache domain containing 1 protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-3 chr10 4270083 4270426 + 0.301029995663982 NA intron (NM_031185, intron 1 of 3) intron (NM_031185, intron 1 of 3) 3925 NM_031185 83397 Mm.27481 NM_031185 ENSMUSG00000038587 Akap12 AI317366|SSeCKS|Srcs5|Tsga12 A kinase (PRKA) anchor protein (gravin) 12 protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-16 chr18 60914899 60915101 + 0.301029995663982 NA intron (NM_001038499, intron 1 of 1) intron (NM_001038499, intron 1 of 1) 2760 NM_001038499 545260 Mm.20147 NM_001038499 ENSMUSG00000036412 Arsi BC020108 arylsulfatase i protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-2 chr1 59999743 59999947 + 0.301029995663982 NA intron (NM_001357296, intron 9 of 10) intron (NM_001357296, intron 9 of 10) 43277 NM_001357296 70375 Mm.17834 NM_027407 ENSMUSG00000026018 Ica1l 1700030B17Rik|Als2cr15|b2b3465Clo islet cell autoantigen 1-like protein-coding common_peak2_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-15 chr18 32148668 32149082 + 0.301029995663982 NA Intergenic Intergenic -9305 NM_001042767 19123 Mm.2786 NM_008934 ENSMUSG00000024386 Proc PC protein C protein-coding common_peak1_17_15_-0.101233771754051_3.94938311412297_0.301029995663982-16 chr7 80375837 80376095 + 0.301029995663982 NA Intergenic Intergenic -4591 NM_172903 140481 Mm.269245 NM_172903 ENSMUSG00000038886 Man2a2 1700052O22Rik|4931438M07Rik|AI480988|MX|Man IIx mannosidase 2, alpha 2 protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982 chr10 122096651 122096976 + 0.301029995663982 NA intron (NM_153059, intron 1 of 5) CpG 289 NM_153059 216395 Mm.236764 NM_153059 ENSMUSG00000034620 Tmem5 6330415D21Rik transmembrane protein 5 protein-coding common_peak1_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-5 chr7 34342458 34343138 + 0.301029995663982 NA Intergenic Intergenic 46907 NM_001360654 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral|mRAP55A LSM14A mRNA processing body assembly factor protein-coding common_peak2_34_29_-0.0555346030627151_4.87912329407716_0.301029995663982-7 chr3 53107917 53108593 + 0.301029995663982 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 66708 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-2 chr11 18988420 18988630 + 0.30102999566398 NA intron (NM_010789, intron 6 of 11) intron (NM_010789, intron 6 of 11) 30444 NM_001193271 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-2 chr1 193402011 193402283 + 0.30102999566398 NA Intergenic Intergenic -31865 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-25 chr8 70488685 70488926 + 0.30102999566398 NA Intergenic B1F1|SINE|Alu -1447 NM_182991 67937 Mm.23002 NM_182991 ENSMUSG00000035964 Tmem59l 5330410G16Rik transmembrane protein 59-like protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-16 chr3 153913207 153913481 + 0.30102999566398 NA promoter-TSS (NM_001163478) promoter-TSS (NM_001163478) -378 NR_028094 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-9 chr15 55121678 55122054 + 0.30102999566398 NA intron (NM_145470, intron 1 of 8) intron (NM_145470, intron 1 of 8) -8284 NR_045093 100503794 Mm.360519 NR_045093 ENSMUSG00000053749 Gm9920 - predicted gene 9920 ncRNA unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398 chr1 192781650 192781887 + 0.30102999566398 NA Intergenic Intergenic -10549 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-13 chr2 25225889 25226122 + 0.30102999566398 NA Intergenic Intergenic -1303 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-3 chr11 46246259 46246482 + 0.30102999566398 NA intron (NM_001252459, intron 21 of 30) intron (NM_001252459, intron 21 of 30) 10813 NM_177075 320116 Mm.39600 NM_177075 ENSMUSG00000048721 Fndc9 C030019I05Rik fibronectin type III domain containing 9 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-2 chr1 91692314 91692663 + 0.30102999566398 NA Intergenic Intergenic -108973 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist basic helix-loop-helix transcription factor 2 protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-6 chr15 75678996 75679204 + 0.30102999566398 NA promoter-TSS (NM_001355589) promoter-TSS (NM_001355589) -300 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-8 chr12 31949003 31949218 + 0.30102999566398 NA intron (NM_177993, intron 1 of 8) intron (NM_177993, intron 1 of 8) 1135 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-6 chr15 80138100 80138320 + 0.30102999566398 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 5056 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-5 chr13 22051324 22051533 + 0.30102999566398 NA Intergenic Intergenic 8198 NM_178198 319183 Mm.371766 NM_178198 ENSMUSG00000069300 Hist1h2bj - histone cluster 1, H2bj protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-10 chr2 132112019 132112352 + 0.30102999566398 NA intron (NM_001355430, intron 1 of 15) intron (NM_001355430, intron 1 of 15) 32923 NM_001355431 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-17 chr6 90735825 90736043 + 0.30102999566398 NA intron (NM_001356440, intron 1 of 13) intron (NM_001356440, intron 1 of 13) -19405 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-17 chr16 86805225 86805538 + 0.30102999566398 NA intron (NR_153789, intron 1 of 5) intron (NR_153789, intron 1 of 5) 1132 NR_153789 102635020 Mm.132956 NR_153789 Gm32461 - predicted gene, 32461 ncRNA unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-7 chr11 86691911 86692303 + 0.30102999566398 NA 3' UTR (NM_175004, exon 3 of 3) 3' UTR (NM_175004, exon 3 of 3) 8026 NM_001098810 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-7 chr11 97191663 97191923 + 0.30102999566398 NA Intergenic B3|SINE|B2 -3901 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-16 chr5 113634126 113634330 + 0.30102999566398 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 9375 NM_001359060 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-12 chr16 17812746 17813018 + 0.30102999566398 NA Intergenic Intergenic 15600 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-8 chr2 117469921 117470167 + 0.30102999566398 NA Intergenic Intergenic -127167 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398 chr1 45492259 45492570 + 0.30102999566398 NA intron (NM_007737, intron 1 of 53) intron (NM_007737, intron 1 of 53) 10868 NM_007737 12832 Mm.10299 NM_007737 ENSMUSG00000026042 Col5a2 1110014L14Rik collagen, type V, alpha 2 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-12 chr8 119832948 119833148 + 0.30102999566398 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 7531 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-14 chr15 53202151 53202480 + 0.30102999566398 NA intron (NM_010162, intron 1 of 10) intron (NM_010162, intron 1 of 10) 143868 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-17 chr5 31635938 31636218 + 0.30102999566398 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 22127 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-5 chr13 31577564 31577825 + 0.30102999566398 NA intron (NR_029439, intron 3 of 5) intron (NR_029439, intron 3 of 5) 4819 NR_029439 71307 Mm.376184 NR_029439 ENSMUSG00000038408 1700018A04Rik 4930551G20Rik|4933439J11Rik RIKEN cDNA 1700018A04 gene ncRNA common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-17 chr9 111994151 111994380 + 0.30102999566398 NA Intergenic Intergenic 124446 NR_029823 723815 NR_029823 ENSMUSG00000065441 Mir128-2 Mirn128-2|Mirn128b|mir-128-2|mir-128b microRNA 128-2 ncRNA common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398 chr1 157343144 157343466 + 0.30102999566398 NA intron (NM_177644, intron 1 of 17) B4A|SINE|B4 -69047 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-4 chr11 98412038 98412298 + 0.30102999566398 NA promoter-TSS (NM_001003817) promoter-TSS (NM_001003817) -316 NM_001003817 13866 Mm.290822 NM_001003817 ENSMUSG00000062312 Erbb2 Erbb-2|HER-2|HER2|Neu|c-erbB2|c-neu|l11Jus8|mKIAA3023 erb-b2 receptor tyrosine kinase 2 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-3 chr11 75631046 75631263 + 0.30102999566398 NA exon (NM_008916, exon 1 of 12) exon (NM_008916, exon 1 of 12) 134 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-19 chr18 75597614 75597848 + 0.30102999566398 NA intron (NM_201354, intron 6 of 11) intron (NM_201354, intron 6 of 11) 83086 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 - predicted gene 10532 ncRNA unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-8 chr19 58978515 58978878 + 0.30102999566398 NA intron (NM_175172, intron 14 of 14) intron (NM_175172, intron 14 of 14) -35024 NM_001327998 73442 Mm.39739 NM_175199 ENSMUSG00000025092 Hspa12a 1700063D12Rik|AI118035|AI840429|AW048913|AW556406|D5Mgi40|Gm19925|mKIAA0417 heat shock protein 12A protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-21 chr4 123422476 123422786 + 0.30102999566398 NA intron (NM_001199137, intron 52 of 92) intron (NM_001199137, intron 52 of 92) -10720 NM_001167918 442834 Mm.483803 NM_001167918 D830031N03Rik Kiaa0754|mKIAA0754 RIKEN cDNA D830031N03 gene protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398 chr1 21076180 21076492 + 0.30102999566398 NA intron (NM_177409, intron 1 of 10) intron (NM_177409, intron 1 of 10) 2889 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-10 chr12 112938218 112938416 + 0.30102999566398 NA intron (NM_001316724, intron 4 of 4) intron (NM_001316724, intron 4 of 4) 3825 NM_025399 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-7 chr14 55681292 55681562 + 0.30102999566398 NA exon (NM_145705, exon 1 of 9) exon (NM_145705, exon 1 of 9) 390 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-20 chr7 145221615 145221875 + 0.30102999566398 NA intron (NR_132644, intron 24 of 24) intron (NR_132644, intron 24 of 24) -13626 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-7 chr13 21810613 21810847 + 0.30102999566398 NA promoter-TSS (NM_001097979) promoter-TSS (NM_001097979) 263 NM_178185 319171 Mm.250564 NM_178185 ENSMUSG00000094777 Hist1h2ap Gm11276 histone cluster 1, H2ap protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-4 chr12 69419505 69419795 + 0.30102999566398 NA Intergenic Intergenic 47500 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-5 chr11 35973560 35973807 + 0.30102999566398 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 6406 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-3 chr11 8659203 8659397 + 0.30102999566398 NA intron (NM_001083587, intron 1 of 30) intron (NM_001083587, intron 1 of 30) 5235 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-23 chr6 4746623 4746833 + 0.30102999566398 NA promoter-TSS (NM_130877) promoter-TSS (NM_130877) 476 NM_001130188 20392 Mm.8739 NM_011360 ENSMUSG00000004631 Sgce e-SG sarcoglycan, epsilon protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-18 chr5 43788209 43788417 + 0.30102999566398 NA Intergenic Intergenic -6164 NM_178729 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-4 chr10 17569337 17569537 + 0.30102999566398 NA Intergenic Intergenic -153791 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-15 chr5 93136705 93136924 + 0.30102999566398 NA intron (NM_001009818, intron 1 of 9) intron (NM_001009818, intron 1 of 9) 43398 NM_001347377 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-21 chr8 26963137 26963350 + 0.30102999566398 NA Intergenic Intergenic -14093 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-11 chr16 55540091 55540296 + 0.30102999566398 NA Intergenic Intergenic 45462 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-4 chr11 70874147 70874334 + 0.30102999566398 NA intron (NM_001291143, intron 2 of 18) intron (NM_001291143, intron 2 of 18) 29479 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-22 chr5 123827448 123827809 + 0.30102999566398 NA Intergenic Intergenic 37888 NM_030701 80885 Mm.440567 NM_030701 ENSMUSG00000045502 Hcar2 Gpr109a|Gpr109b|HM74|Niacr1|PUMA-G|Pumag|mHM74b hydroxycarboxylic acid receptor 2 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-15 chr15 64366521 64366725 + 0.30102999566398 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 16296 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-15 chr2 125706711 125706898 + 0.30102999566398 NA intron (NM_199022, intron 1 of 11) intron (NM_199022, intron 1 of 11) 17344 NM_199022 271849 Mm.425101 NM_199022 ENSMUSG00000035109 Shc4 6230417E10Rik|9930029B02Rik|Gm685|RaLP SHC (Src homology 2 domain containing) family, member 4 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-9 chr2 31952469 31952821 + 0.30102999566398 NA intron (NM_145144, intron 2 of 5) intron (NM_145144, intron 2 of 5) 2342 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-12 chr4 63404347 63404582 + 0.30102999566398 NA Intergenic Intergenic -1019 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-12 chr4 130573507 130573714 + 0.30102999566398 NA intron (NM_025998, intron 1 of 6) intron (NM_025998, intron 1 of 6) 426 NM_025998 67149 Mm.423029 NM_025998 ENSMUSG00000078532 Nkain1 2610200G18Rik|2810426C15Rik Na+/K+ transporting ATPase interacting 1 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-4 chr11 117782048 117782268 + 0.30102999566398 NA promoter-TSS (NM_001195088) promoter-TSS (NM_001195088) -139 NM_001195090 217356 Mm.116675 NM_181856 ENSMUSG00000050106 Tmc8 EVIN2|Ever2|mFLJ00400 transmembrane channel-like gene family 8 protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-3 chr1 194943694 194943945 + 0.30102999566398 NA intron (NM_001111059, intron 1 of 7) intron (NM_001111059, intron 1 of 7) 4998 NM_133654 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-11 chr14 25520819 25521059 + 0.30102999566398 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -13500 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-9 chr2 117712649 117712854 + 0.30102999566398 NA Intergenic Intergenic 100051 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-14 chr7 44749003 44749373 + 0.30102999566398 NA promoter-TSS (NM_178734) promoter-TSS (NM_178734) 559 NM_133945 101568 Mm.28816 NM_133945 ENSMUSG00000002205 Vrk3 AI428238 vaccinia related kinase 3 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-10 chr2 180215893 180216120 + 0.30102999566398 NA intron (NM_001081171, intron 2 of 78) intron (NM_001081171, intron 2 of 78) 9853 NM_001081171 16776 Mm.4339 NM_001081171 ENSMUSG00000015647 Lama5 AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533 laminin, alpha 5 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-12 chr14 30973907 30974229 + 0.30102999566398 NA intron (NM_001308328, intron 7 of 13) B3|SINE|B2 22691 NM_011849 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-6 chr18 60670973 60671351 + 0.30102999566398 NA non-coding (NR_045401, exon 3 of 3) non-coding (NR_045401, exon 3 of 3) 7752 NR_045401 328963 Mm.417203 NR_045401 G630071F17Rik G630071F17 RIKEN cDNA G630071F17 gene ncRNA common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-15 chr5 92927255 92927530 + 0.30102999566398 NA intron (NM_001077596, intron 2 of 9) intron (NM_001077596, intron 2 of 9) 29399 NM_001077596 27428 Mm.46014 NM_015756 ENSMUSG00000029381 Shroom3 AL022960|D5Ertd287e|Shrm|Shrm3 shroom family member 3 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-3 chr12 55079661 55079965 + 0.30102999566398 NA promoter-TSS (NM_011899) promoter-TSS (NM_011899) 297 NR_030764 72658 Mm.434380 NM_028314 ENSMUSG00000062198 2700097O09Rik AW552125 RIKEN cDNA 2700097O09 gene protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-2 chr10 4162161 4162392 + 0.30102999566398 NA intron (NM_001170785, intron 27 of 27) intron (NM_001170785, intron 27 of 27) 50844 NR_152620 102632515 Mm.416995 NR_152620 ENSMUSG00000111266 Gm30570 - predicted gene, 30570 ncRNA common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-15 chr7 109618659 109618953 + 0.30102999566398 NA Intergenic Intergenic -1659 NM_029811 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-8 chr12 3307933 3308217 + 0.30102999566398 NA intron (NM_016676, intron 1 of 5) intron (NM_016676, intron 1 of 5) 1894 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-2 chr10 56487191 56487384 + 0.30102999566398 NA Intergenic Intergenic 55306 NR_152768 102640560 Mm.417249 NR_152768 Gm36595 - predicted gene, 36595 ncRNA common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-19 chr6 83115600 83115825 + 0.30102999566398 NA exon (NM_020619, exon 1 of 4) exon (NM_020619, exon 1 of 4) 206 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-16 chr6 148943337 148943609 + 0.30102999566398 NA intron (NM_001361398, intron 1 of 4) intron (NM_001361398, intron 1 of 4) 1353 NM_001355645 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Sinhcaf|Tera family with sequence similarity 60, member A protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-12 chr9 43010982 43011184 + 0.30102999566398 NA intron (NM_001359232, intron 11 of 40) intron (NM_001359232, intron 11 of 40) -66712 NM_175481 110637 Mm.370291 NM_175481 ENSMUSG00000032017 Grik4 6330551K01Rik|GluK4|GluRgamma1|KA-1|KA1 glutamate receptor, ionotropic, kainate 4 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-18 chr7 79284075 79284340 + 0.30102999566398 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 10941 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-6 chr15 75943456 75943865 + 0.30102999566398 NA intron (NM_030199, intron 1 of 1) ID4|SINE|ID 2708 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-5 chr11 78550288 78550634 + 0.30102999566398 NA intron (NM_133706, intron 1 of 2) CpG 274 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-12 chr19 53406224 53406450 + 0.30102999566398 NA Intergenic Intergenic -15703 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 - survival motor neuron domain containing 1 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-17 chr6 83137909 83138157 + 0.30102999566398 NA 5' UTR (NM_009106, exon 2 of 13) 5' UTR (NM_009106, exon 2 of 13) 949 NM_133641 20166 Mm.4139 NM_009106 ENSMUSG00000034930 Rtkn - rhotekin protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-13 chr6 71978710 71978979 + 0.30102999566398 NA 3' UTR (NM_009088, exon 34 of 34) 3' UTR (NM_009088, exon 34 of 34) 63684 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-13 chr16 87494593 87494791 + 0.30102999566398 NA intron (NM_009840, intron 1 of 14) intron (NM_009840, intron 1 of 14) 1177 NM_009840 12469 Mm.328673 NM_009840 ENSMUSG00000025613 Cct8 AI132397|Cctq|Tcpq chaperonin containing Tcp1, subunit 8 (theta) protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-13 chr15 31248689 31248958 + 0.30102999566398 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 24438 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-13 chr3 21626483 21626673 + 0.30102999566398 NA Intergenic Intergenic -450074 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-6 chr14 25872394 25872650 + 0.30102999566398 NA exon (NM_013469, exon 4 of 15) exon (NM_013469, exon 4 of 15) 30367 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-2 chr1 77409818 77410145 + 0.30102999566398 NA intron (NM_007936, intron 5 of 17) intron (NM_007936, intron 5 of 17) 86787 NR_105770 102465180 NR_105770 ENSMUSG00000099141 Mir6352 Gm27481|mmu-mir-6352 microRNA 6352 ncRNA unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-7 chr17 34603428 34603675 + 0.30102999566398 NA promoter-TSS (NM_019403) promoter-TSS (NM_019403) 10 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-7 chr19 55462388 55462586 + 0.30102999566398 NA intron (NM_001360431, intron 6 of 8) intron (NM_001360431, intron 6 of 8) 146430 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-20 chr2 120027043 120027291 + 0.30102999566398 NA promoter-TSS (NM_001114637) promoter-TSS (NM_001114637) -316 NR_104353 102238433 Mm.41467 NR_104353 ENSMUSG00000033852 Gm28042 Jmjd7-pla2g4b predicted gene, 28042 ncRNA common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-23 chr9 110657034 110657259 + 0.30102999566398 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 643 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-14 chr3 39952539 39952825 + 0.30102999566398 NA Intergenic Intergenic 570230 NR_040445 100040882 Mm.272869 NR_040445 ENSMUSG00000037884 1700017G19Rik - RIKEN cDNA 1700017G19 gene ncRNA common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-12 chr2 102943502 102943879 + 0.30102999566398 NA Intergenic Intergenic -42025 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-9 chr17 66358094 66358321 + 0.30102999566398 NA intron (NM_172963, intron 8 of 13) intron (NM_172963, intron 8 of 13) 91543 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-6 chr12 53587775 53588065 + 0.30102999566398 NA intron (NM_013780, intron 3 of 11) intron (NM_013780, intron 3 of 11) 339243 NM_013780 27386 Mm.247044 NM_013780 ENSMUSG00000021010 Npas3 4930423H22Rik|bHLHe12 neuronal PAS domain protein 3 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-7 chr19 10134243 10134647 + 0.30102999566398 NA Intergenic G-rich|Low_complexity|Low_complexity -32942 NM_019699 56473 Mm.38901 NM_019699 ENSMUSG00000024665 Fads2 2900042M13Rik|Fadsd2 fatty acid desaturase 2 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-5 chr10 82815838 82816142 + 0.30102999566398 NA intron (NR_038042, intron 1 of 2) intron (NR_038042, intron 1 of 2) 3867 NR_038042 70003 Mm.48789 NR_038042 ENSMUSG00000056821 1700028I16Rik - RIKEN cDNA 1700028I16 gene ncRNA common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-2 chr10 17035442 17035719 + 0.30102999566398 NA intron (NR_038020, intron 1 of 8) intron (NR_038020, intron 1 of 8) 60202 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-4 chr11 97743798 97744033 + 0.30102999566398 NA promoter-TSS (NR_106180) promoter-TSS (NR_106180) 789 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-4 chr13 42344149 42344485 + 0.30102999566398 NA Intergenic Intergenic 42841 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-16 chr5 124920613 124920880 + 0.30102999566398 NA Intergenic Intergenic 58041 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-6 chr11 50290701 50290910 + 0.30102999566398 NA intron (NM_175334, intron 1 of 4) intron (NM_175334, intron 1 of 4) 1531 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like transcriptional coactivator 1 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-6 chr11 58955034 58955320 + 0.30102999566398 NA promoter-TSS (NR_134309) promoter-TSS (NR_134309) 492 NM_178218 319162 Mm.212549 NM_178218 ENSMUSG00000078851 Hist3h2a - histone cluster 3, H2a protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-2 chr10 24448553 24448770 + 0.30102999566398 NA Intergenic Intergenic -146781 NM_010217 14219 Mm.390287 NM_010217 ENSMUSG00000019997 Ctgf Ccn2|Fisp12|Hcs24|fisp-12 connective tissue growth factor protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-13 chr4 129054842 129055085 + 0.30102999566398 NA Intergenic Intergenic -3308 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-14 chr3 158905834 158906053 + 0.30102999566398 NA Intergenic Intergenic -170421 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-18 chr17 86167964 86168239 + 0.30102999566398 NA 5' UTR (NM_011104, exon 1 of 15) 5' UTR (NM_011104, exon 1 of 15) 316 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-11 chr14 7849809 7850054 + 0.30102999566398 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 31974 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-8 chr14 16483733 16483981 + 0.30102999566398 NA intron (NM_001289760, intron 5 of 9) intron (NM_001289760, intron 5 of 9) 91619 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-5 chr12 85485723 85485935 + 0.30102999566398 NA Intergenic Intergenic 11939 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-8 chr17 16340088 16340408 + 0.30102999566398 NA Intergenic Intergenic -513662 NM_178615 68799 Mm.293466 NM_178615 ENSMUSG00000048027 Rgmb 1110059F19Rik|DRAGON repulsive guidance molecule family member B protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-16 chr9 58249853 58250066 + 0.30102999566398 NA promoter-TSS (NM_001311088) promoter-TSS (NM_001311088) -173 NM_178087 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398 chr1 16214325 16214612 + 0.30102999566398 NA Intergenic Intergenic 108586 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-8 chr2 33215531 33215753 + 0.30102999566398 NA promoter-TSS (NM_011923) promoter-TSS (NM_011923) -319 NM_011923 26360 Mm.208919 NM_011923 ENSMUSG00000004105 Angptl2 AI593246|AW260363|Arp2 angiopoietin-like 2 protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-10 chr5 91532168 91532459 + 0.30102999566398 NA intron (NM_145562, intron 1 of 3) intron (NM_145562, intron 1 of 3) 14613 NM_145562 231440 Mm.5002 NM_145562 ENSMUSG00000034981 Parm1 2210012L08Rik|9130213B05Rik|W91666 prostate androgen-regulated mucin-like protein 1 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-11 chr19 24707170 24707372 + 0.30102999566398 NA intron (NM_175013, intron 10 of 10) intron (NM_175013, intron 10 of 10) 33263 NM_183160 226040 Mm.391170 NM_183160 ENSMUSG00000048572 Tmem252 E030010A14Rik transmembrane protein 252 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-10 chr6 97179755 97180022 + 0.30102999566398 NA promoter-TSS (NM_001081111) promoter-TSS (NM_001081111) -764 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-5 chr15 25983826 25984076 + 0.30102999566398 NA promoter-TSS (NM_144523) promoter-TSS (NM_144523) -415 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398 chr1 138039375 138039605 + 0.30102999566398 NA Intergenic Intergenic 72851 NR_029820 723890 NR_029820 ENSMUSG00000065458 Mir181b-1 Mirn181b-1|mir-181b-1 microRNA 181b-1 ncRNA common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-10 chr15 101975673 101975958 + 0.30102999566398 NA Intergenic Intergenic -21528 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-3 chr10 81544800 81545040 + 0.30102999566398 NA exon (NM_010301, exon 1 of 7) exon (NM_010301, exon 1 of 7) 126 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-9 chr13 51329178 51329420 + 0.30102999566398 NA Intergenic Intergenic -79319 NM_010101 13610 Mm.136736 NM_010101 ENSMUSG00000067586 S1pr3 AI132464|Edg3|Lpb3|S1p3 sphingosine-1-phosphate receptor 3 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-10 chr14 4726995 4727324 + 0.30102999566398 NA Intergenic CpG -128364 NM_001242945 100041306 Mm.360540 NM_001242945 ENSMUSG00000094132 Gm3264 - predicted gene 3264 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-3 chr11 102961404 102961737 + 0.30102999566398 NA intron (NR_037963, intron 2 of 2) intron (NR_037963, intron 2 of 2) 2584 NR_037963 69739 Mm.276539 NR_037963 ENSMUSG00000085338 2410004I01Rik - RIKEN cDNA 2410004I01 gene ncRNA unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-11 chr6 115318135 115318425 + 0.30102999566398 NA Intergenic Intergenic -42671 NM_001127330 19016 Mm.3020 NM_011146 ENSMUSG00000000440 Pparg Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2 peroxisome proliferator activated receptor gamma protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-4 chr10 128458681 128458895 + 0.30102999566398 NA promoter-TSS (NM_001114096) promoter-TSS (NM_001114096) 108 NR_106183 102465894 NR_106183 ENSMUSG00000098957 Mir8105 Gm27346|mmu-mir-8105 microRNA 8105 ncRNA common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-8 chr15 13276432 13276672 + 0.30102999566398 NA Intergenic Intergenic -102877 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398 chr1 168429608 168429836 + 0.30102999566398 NA intron (NM_183355, intron 1 of 8) intron (NM_183355, intron 1 of 8) 2447 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-15 chr3 79993844 79994087 + 0.30102999566398 NA Intergenic Intergenic 108035 NM_133187 68659 Mm.427274 NM_133187 ENSMUSG00000027955 Fam198b 1110032E23Rik|2210419I08Rik|AV011458|Ened family with sequence similarity 198, member B protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-14 chr5 73047391 73047778 + 0.30102999566398 NA exon (NM_028194, exon 55 of 63) exon (NM_028194, exon 55 of 63) 40680 NM_173403 231290 Mm.491387 NM_173403 ENSMUSG00000029219 Slc10a4 E130304D01 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 protein-coding unique_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-7 chr15 76117554 76117801 + 0.30102999566398 NA intron (NM_144848, intron 1 of 1) intron (NM_144848, intron 1 of 1) 2518 NM_144848 223650 Mm.259929 NM_144848 Eppk1 6230424I18Rik|EPIPL|EPIPL1|EPPK epiplakin 1 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-24 chr6 31115420 31115723 + 0.30102999566398 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -52478 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-14 chr2 30364405 30364598 + 0.30102999566398 NA 5' UTR (NM_175392, exon 1 of 16) 5' UTR (NM_175392, exon 1 of 16) 166 NM_175392 108958 Mm.254974 NM_175392 ENSMUSG00000026858 Miga2 5730472N09Rik|AA408683|AI790341|C9orf54|Fam73b|R74766 mitoguardin 2 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-9 chr18 60991965 60992195 + 0.30102999566398 NA Intergenic Intergenic 22119 NM_201353 240332 Mm.39846 NM_201353 ENSMUSG00000052026 Slc6a7 AW455934|PROT solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-10 chr18 75659656 75659924 + 0.30102999566398 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 37906 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-9 chr12 98713118 98713348 + 0.30102999566398 NA intron (NM_001146199, intron 3 of 18) intron (NM_001146199, intron 3 of 18) 21412 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-3 chr1 92654418 92654700 + 0.30102999566398 NA Intergenic Intergenic -5718 NM_153114 260301 Mm.219545 NM_153114 ENSMUSG00000044055 Otos OTOSP otospiralin protein-coding common_peak2_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-22 chr9 20951291 20951533 + 0.30102999566398 NA intron (NM_001199432, intron 1 of 38) intron (NM_001199432, intron 1 of 38) 1211 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-5 chr12 8327694 8327945 + 0.30102999566398 NA intron (NM_021429, intron 4 of 6) intron (NM_021429, intron 4 of 6) 14386 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398 chr1 180640596 180640942 + 0.30102999566398 NA promoter-TSS (NR_120498) promoter-TSS (NR_120498) -381 NM_001103182 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding unique_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-16 chr15 100305121 100305326 + 0.30102999566398 NA exon (NM_027334, exon 1 of 2) exon (NM_027334, exon 1 of 2) 406 NM_027334 70152 Mm.488086 NM_027334 ENSMUSG00000054619 Mettl7a1 2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1 methyltransferase like 7A1 protein-coding unique_peak1_14_12_-0.0628521933687187_3.66901362145673_0.30102999566398-11 chr2 157407992 157408194 + 0.30102999566398 NA Intergenic Intergenic -16200 NM_009271 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-11 chr3 9526909 9527127 + 0.30102999566398 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 83067 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-9 chr3 84040393 84040627 + 0.30102999566398 NA promoter-TSS (NM_172681) promoter-TSS (NM_172681) -349 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 Tmem131l D930015E06Rik|Kiaa0922|mKIAA0922 transmembrane 131 like protein-coding unique_peak1_13_12_-0.161685644775923_3.61959689575313_0.30102999566398-11 chr7 28982206 28982438 + 0.30102999566398 NA promoter-TSS (NM_001285943) promoter-TSS (NM_001285943) 272 NM_001355054 26411 Mm.148278 NM_008279 ENSMUSG00000037337 Map4k1 Hpk1|mHPK1 mitogen-activated protein kinase kinase kinase kinase 1 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-2 chr10 18470275 18470537 + 0.301029995663979 NA intron (NM_001163592, intron 1 of 7) intron (NM_001163592, intron 1 of 7) 425 NM_001163592 215819 Mm.297971 NM_173390 ENSMUSG00000039835 Nhsl1 5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357 NHS-like 1 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-3 chr12 100775968 100776566 + 0.301029995663979 NA Intergenic Intergenic -2790 NM_001361023 217830 Mm.218590 NM_145448 ENSMUSG00000021185 Dglucy 9030617O03Rik D-glutamate cyclase protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-10 chr9 67050663 67050907 + 0.301029995663979 NA Intergenic Intergenic -1572 NM_001164251 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|TPM1kappa|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-10 chr3 143193941 143194227 + 0.301029995663979 NA Intergenic Intergenic -48971 NR_040551 320072 Mm.136397 NR_040551 ENSMUSG00000105923 A830019L24Rik - RIKEN cDNA A830019L24 gene ncRNA common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-4 chr11 115815095 115815331 + 0.301029995663979 NA exon (NM_029557, exon 3 of 11) exon (NM_029557, exon 3 of 11) 474 NM_029557 76265 Mm.275438 NM_029557 ENSMUSG00000020781 Tsen54 0610034P02Rik tRNA splicing endonuclease subunit 54 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-14 chr5 13387622 13387880 + 0.301029995663979 NA Intergenic Intergenic -9033 NM_001243072 20346 Mm.372039 NM_009152 ENSMUSG00000028883 Sema3a Hsema-I|SEMA1|SemD|Semad|coll-1 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-17 chr2 129183702 129183994 + 0.301029995663979 NA Intergenic Intergenic -3175 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 - expressed sequence AI847159 ncRNA common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-13 chr9 108049983 108050509 + 0.301029995663979 NA exon (NM_001357682, exon 5 of 10) exon (NM_001357682, exon 5 of 10) 982 NM_001357682 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-2 chr1 134909959 134910203 + 0.301029995663979 NA intron (NM_001081307, intron 1 of 23) intron (NM_001081307, intron 1 of 23) 45859 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979 chr10 61451580 61451784 + 0.301029995663979 NA intron (NM_010124, intron 1 of 2) intron (NM_010124, intron 1 of 2) 987 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-13 chr17 75277266 75277511 + 0.301029995663979 NA intron (NM_019919, intron 12 of 33) intron (NM_019919, intron 12 of 33) 98607 NM_001331235 268977 Mm.269747 NM_019919 ENSMUSG00000001870 Ltbp1 9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo latent transforming growth factor beta binding protein 1 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-3 chr17 35165176 35165495 + 0.301029995663979 NA promoter-TSS (NM_020027) promoter-TSS (NM_020027) -458 NM_020027 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-8 chr7 66373420 66373721 + 0.301029995663979 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 8154 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-5 chr17 94749417 94749894 + 0.301029995663979 NA promoter-TSS (NR_024720) promoter-TSS (NR_024720) 364 NM_001357136 76781 Mm.139146 NM_176917 ENSMUSG00000055660 Mettl4 2410198H06Rik|A730091E08Rik|AV296509|HsT661 methyltransferase like 4 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-11 chr3 144093320 144093624 + 0.301029995663979 NA Intergenic Intergenic 108860 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding unique_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-2 chr10 121904560 121905013 + 0.301029995663979 NA intron (NM_001081037, intron 3 of 21) B1F|SINE|Alu 142529 NM_001242411 117600 Mm.288698 NM_001081037 ENSMUSG00000020121 Srgap1 4930572H05Rik|Arhgap13 SLIT-ROBO Rho GTPase activating protein 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-9 chr14 20928703 20928910 + 0.301029995663979 NA promoter-TSS (NM_009502) promoter-TSS (NM_009502) -592 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-7 chr16 35424865 35425319 + 0.301029995663979 NA intron (NM_028295, intron 10 of 16) intron (NM_028295, intron 10 of 16) -61174 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-8 chr5 142797109 142797668 + 0.301029995663979 NA intron (NM_178242, intron 2 of 15) B4|SINE|B4 19999 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-11 chr3 131112166 131112702 + 0.301029995663979 NA promoter-TSS (NM_001276403) promoter-TSS (NM_001276403) -357 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-23 chr6 86899497 86899762 + 0.301029995663979 NA intron (NM_001040106, intron 1 of 20) intron (NM_001040106, intron 1 of 20) 50112 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding unique_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-3 chr5 151191876 151192432 + 0.301029995663979 NA Intergenic Intergenic -1961 NR_153382 243362 Mm.209272 NM_146258 ENSMUSG00000016128 Stard13 DLC2|GT650 StAR-related lipid transfer (START) domain containing 13 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-8 chr2 30743644 30743939 + 0.301029995663979 NA Intergenic Intergenic 22581 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-2 chr11 40402576 40403007 + 0.301029995663979 NA Intergenic Intergenic 289891 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-2 chr13 91929614 91930154 + 0.301029995663979 NA intron (NM_009027, intron 5 of 14) intron (NM_009027, intron 5 of 14) -52999 NM_198415 76722 Mm.316438 NM_198415 ENSMUSG00000021622 Ckmt2 2300008A19Rik|ScCKmit creatine kinase, mitochondrial 2 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-12 chr15 102460539 102460754 + 0.301029995663979 NA exon (NM_001170911, exon 3 of 4) exon (NM_001170911, exon 3 of 4) 1476 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-8 chr19 41895702 41895938 + 0.301029995663979 NA intron (NM_199447, intron 1 of 33) MIR3|SINE|MIR 333 NM_199447 107094 Mm.276044 NM_199447 ENSMUSG00000035049 Rrp12 AA408556|AA536972|mKIAA0690 ribosomal RNA processing 12 homolog (S. cerevisiae) protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-5 chr14 23633687 23634061 + 0.301029995663979 NA intron (NM_001253364, intron 3 of 27) intron (NM_001253364, intron 3 of 27) 370331 NM_001253375 16531 Mm.343607 NM_010610 ENSMUSG00000063142 Kcnma1 5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-10 chr8 122151695 122152214 + 0.301029995663979 NA Intergenic Intergenic -130187 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-15 chr9 58436339 58436671 + 0.301029995663979 NA Intergenic CT-rich|Low_complexity|Low_complexity -18668 NR_040736 74879 Mm.416924 NR_040736 ENSMUSG00000097651 4930461G14Rik - RIKEN cDNA 4930461G14 gene ncRNA common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-15 chr7 143008300 143008651 + 0.301029995663979 NA intron (NM_020286, intron 2 of 7) intron (NM_020286, intron 2 of 7) 2816 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-12 chr4 45455364 45455558 + 0.301029995663979 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -46695 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-9 chr6 146674853 146675185 + 0.301029995663979 NA Intergenic Intergenic 17801 NR_046277 74925 Mm.386304 NR_046277 ENSMUSG00000085238 4930479D17Rik - RIKEN cDNA 4930479D17 gene ncRNA unique_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-4 chr7 134773000 134773638 + 0.301029995663979 NA intron (NM_001033420, intron 18 of 51) intron (NM_001033420, intron 18 of 51) 102632 NM_001033420 330662 Mm.436572 NM_001033420 ENSMUSG00000058325 Dock1 9130006G06Rik|AI854900|D630004B07Rik|b2b3190Clo dedicator of cytokinesis 1 protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-2 chr15 9070510 9070851 + 0.301029995663979 NA promoter-TSS (NM_001286255) promoter-TSS (NM_001286255) -580 NM_001286255 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-9 chr2 52959293 52959770 + 0.301029995663979 NA intron (NM_172409, intron 1 of 26) intron (NM_172409, intron 1 of 26) 101663 NM_172409 71409 Mm.394427 NM_172409 ENSMUSG00000036053 Fmnl2 5430425K04Rik|Man formin-like 2 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979 chr1 90764332 90764581 + 0.301029995663979 NA Intergenic Intergenic 79515 NM_001243008 12835 Mm.7562 NM_009935 ENSMUSG00000048126 Col6a3 AI507288|Col6a-3 collagen, type VI, alpha 3 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-16 chr19 21077668 21077894 + 0.301029995663979 NA Intergenic Intergenic -26929 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-8 chr13 92611448 92611719 + 0.301029995663979 NA intron (NM_172588, intron 1 of 11) intron (NM_172588, intron 1 of 11) 445 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979 chr11 31562204 31562667 + 0.301029995663979 NA Intergenic Intergenic 109427 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-7 chr7 49600048 49600523 + 0.301029995663979 NA intron (NM_175272, intron 36 of 37) intron (NM_175272, intron 36 of 37) 36550 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-20 chr3 98414467 98414719 + 0.301029995663979 NA intron (NM_172863, intron 1 of 2) intron (NM_172863, intron 1 of 2) 32112 NM_172863 242109 Mm.358911 NM_172863 ENSMUSG00000050064 Zfp697 9430053K19|AI467503|Znf697 zinc finger protein 697 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-6 chr14 25529136 25529377 + 0.301029995663979 NA intron (NM_183208, intron 2 of 23) intron (NM_183208, intron 2 of 23) -5183 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-3 chr2 117679313 117679869 + 0.301029995663979 NA Intergenic Intergenic 133211 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-7 chr18 9271321 9271756 + 0.301029995663979 NA Intergenic ORR1F|LTR|ERVL-MaLR 11271 NM_153086 225152 Mm.119273 NM_153086 ENSMUSG00000036855 Gjd4 9430022F06Rik|Cx39 gap junction protein, delta 4 protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-2 chr10 93660980 93661309 + 0.301029995663979 NA intron (NM_021320, intron 2 of 9) intron (NM_021320, intron 2 of 9) 4710 NR_027478 667338 Mm.454582 NR_027478 Gm8580 EG667338 ribosomal protein L29 pseudogene pseudo common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979 chr14 30715478 30715906 + 0.301029995663979 NA promoter-TSS (NM_001166532) promoter-TSS (NM_001166532) 77 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-8 chr18 40141400 40141616 + 0.301029995663979 NA Intergenic Intergenic 77891 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-9 chr16 55537860 55538152 + 0.301029995663979 NA Intergenic Intergenic 43275 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-13 chr4 148511471 148511753 + 0.301029995663979 NA intron (NM_020009, intron 28 of 57) intron (NM_020009, intron 28 of 57) -11150 NM_001039554 654812 Mm.388929 NM_001039554 ENSMUSG00000028989 Angptl7 - angiopoietin-like 7 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-8 chr16 86303403 86303623 + 0.301029995663979 NA Intergenic (TTCA)n|Simple_repeat|Simple_repeat -402388 NM_011782 23794 Mm.112933 NM_011782 ENSMUSG00000022894 Adamts5 9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-7 chr12 80946590 80946875 + 0.301029995663979 NA intron (NM_001079694, intron 2 of 7) intron (NM_001079694, intron 2 of 7) 1233 NM_001347415 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-15 chr19 17386740 17387288 + 0.301029995663979 NA Intergenic B1_Mm|SINE|Alu -7029 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-3 chr11 101553512 101553864 + 0.301029995663979 NA intron (NM_008676, intron 1 of 23) intron (NM_008676, intron 1 of 23) 1034 NM_001252223 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-5 chr15 97750620 97750903 + 0.301029995663979 NA intron (NM_001177810, intron 19 of 27) intron (NM_001177810, intron 19 of 27) 16905 NM_001177810 223864 Mm.24028 NM_144850 ENSMUSG00000022469 Rapgef3 2310016P22Rik|9330170P05Rik|Epac|Epac1 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-9 chr2 75688443 75688871 + 0.301029995663979 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 16006 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-2 chr12 7967741 7967944 + 0.301029995663979 NA Intergenic Intergenic -9835 NM_009693 238055 Mm.221239 NM_009693 ENSMUSG00000020609 Apob AI315052|Apo B-100|apob-100|apob-48 apolipoprotein B protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-4 chr14 9548232 9548542 + 0.301029995663979 NA Intergenic Intergenic -335708 NR_030680 100042415 Mm.235938 NR_030680 ENSMUSG00000089686 Mnd1-ps Gm3833 Mnd1 retrotransposed pseudogene pseudo common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-5 chr6 89349235 89349639 + 0.301029995663979 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 13176 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-12 chr4 89515389 89515692 + 0.301029995663979 NA intron (NR_132431, intron 9 of 9) intron (NR_132431, intron 9 of 9) -172658 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979 chr1 87901352 87901638 + 0.301029995663979 NA intron (NM_177646, intron 3 of 29) intron (NM_177646, intron 3 of 29) -47196 NR_136921 100503175 Mm.426422 NR_136921 ENSMUSG00000101942 Gm19582 - predicted gene, 19582 ncRNA common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-18 chr2 137458546 137458858 + 0.301029995663979 NA Intergenic Intergenic -342182 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding unique_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979 chr13 43365663 43366117 + 0.301029995663979 NA Intergenic Intergenic -4826 NM_178848 68346 Mm.35325 NM_178848 ENSMUSG00000054021 Sirt5 0610012J09Rik|1500032M05Rik|AV001953 sirtuin 5 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-16 chr8 26747036 26747366 + 0.301029995663979 NA Intergenic Intergenic 77222 NR_045904 72316 Mm.490534 NR_045904 ENSMUSG00000100335 2310008N11Rik - RIKEN cDNA 2310008N11 gene ncRNA common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-3 chr10 7019586 7019872 + 0.301029995663979 NA intron (NM_001039652, intron 5 of 5) intron (NM_001039652, intron 5 of 5) 3456 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-2 chr14 20147769 20148057 + 0.301029995663979 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 33869 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-4 chr14 24232186 24232570 + 0.301029995663979 NA intron (NM_001163513, intron 1 of 31) intron (NM_001163513, intron 1 of 31) 13542 NM_001163513 71228 Mm.68971 NM_027726 ENSMUSG00000021782 Dlg5 4933429D20Rik|T25557|mKIAA0583 discs large MAGUK scaffold protein 5 protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-6 chr7 25680829 25681029 + 0.301029995663979 NA promoter-TSS (NM_172148) promoter-TSS (NM_172148) 149 NM_001362154 232987 Mm.22849 NM_172148 ENSMUSG00000063439 B9d2 stumpy B9 protein domain 2 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-14 chr18 60751256 60751608 + 0.301029995663979 NA Intergenic Intergenic -2767 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-7 chr16 30517632 30517977 + 0.301029995663979 NA intron (NM_001357414, intron 10 of 11) intron (NM_001357414, intron 10 of 11) 32774 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-6 chr17 35667175 35667498 + 0.301029995663979 NA TTS (NM_010364) TTS (NM_010364) 256 NM_175137 68915 Mm.32002 NM_175137 ENSMUSG00000038838 Vars2 1190004I24Rik|Vars2l|mKIAA1885 valyl-tRNA synthetase 2, mitochondrial protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-9 chr3 88491266 88491536 + 0.301029995663979 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 1911 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-6 chr11 99553961 99554260 + 0.301029995663979 NA Intergenic Intergenic 2743 NM_025720 66708 Mm.46389 NM_025720 ENSMUSG00000069721 Krtap3-2 2310020D06Rik|4733401L16Rik|KAP3.2|KRTAP3.2 keratin associated protein 3-2 protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-6 chr15 101977947 101978276 + 0.301029995663979 NA Intergenic Intergenic -23824 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-10 chr2 131511220 131511800 + 0.301029995663979 NA intron (NM_001177840, intron 1 of 3) intron (NM_001177840, intron 1 of 3) 19648 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-7 chr3 69441173 69441568 + 0.301029995663979 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 124452 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-21 chr4 82400623 82400909 + 0.301029995663979 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 105013 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-4 chr3 131364856 131365107 + 0.301029995663979 NA Intergenic Intergenic -20058 NM_028943 74442 Mm.273360 NM_028943 ENSMUSG00000050931 Sgms2 4933405A16Rik|5133401H06Rik|AI854299 sphingomyelin synthase 2 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-10 chr2 113457730 113458117 + 0.301029995663979 NA intron (NM_001285459, intron 2 of 16) intron (NM_001285459, intron 2 of 16) 16859 NM_001285459 14260 Mm.4938 NM_010230 ENSMUSG00000044042 Fmn1 Fmn|formin-1|ld formin 1 protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-3 chr12 105557198 105557465 + 0.301029995663979 NA Intergenic Intergenic -5841 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-17 chr9 69466388 69466628 + 0.301029995663979 NA intron (NM_007585, intron 2 of 12) intron (NM_007585, intron 2 of 12) 9564 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-10 chr17 55959641 55960012 + 0.301029995663979 NA promoter-TSS (NR_108021) promoter-TSS (NR_108021) -425 NR_108021 100504333 Mm.391908 NR_108021 ENSMUSG00000097077 Gm16712 - predicted gene, 16712 ncRNA common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-26 chr9 63978415 63978633 + 0.301029995663979 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 43535 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-13 chr5 86172943 86173337 + 0.301029995663979 NA promoter-TSS (NM_172712) promoter-TSS (NM_172712) -397 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-14 chr5 104425494 104425732 + 0.301029995663979 NA Intergenic Intergenic -9498 NM_001204201 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-3 chr13 69581931 69582133 + 0.301029995663979 NA intron (NM_175283, intron 4 of 4) intron (NM_175283, intron 4 of 4) 29431 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-22 chr6 34029546 34029782 + 0.301029995663979 NA exon (NM_028886, exon 1 of 20) exon (NM_028886, exon 1 of 20) 216 NM_028886 74354 Mm.127952 NM_028886 ENSMUSG00000056215 Lrguk 4921528H16Rik leucine-rich repeats and guanylate kinase domain containing protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979 chr1 58722810 58723017 + 0.301029995663979 NA intron (NM_001355056, intron 1 of 8) intron (NM_001355056, intron 1 of 8) -7639 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-15 chr7 110163681 110164043 + 0.301029995663979 NA Intergenic Intergenic 41803 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-11 chr3 144971509 144971892 + 0.301029995663979 NA intron (NM_207208, intron 1 of 13) intron (NM_207208, intron 1 of 13) 3345 NM_207208 99663 Mm.442050 NM_207208 ENSMUSG00000068547 Clca4a 9130020L07Rik|AI504701|Clca4|Clca6 chloride channel accessory 4A protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-5 chr12 24709759 24710089 + 0.301029995663979 NA intron (NM_009104, intron 4 of 9) intron (NM_009104, intron 4 of 9) 1670 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-4 chr17 70738070 70738400 + 0.301029995663979 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 108542 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-5 chr10 127662502 127662756 + 0.301029995663979 NA intron (NM_001122895, intron 5 of 5) intron (NM_001122895, intron 5 of 5) 4074 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-14 chr5 151368140 151368425 + 0.301029995663979 NA promoter-TSS (NR_045699) promoter-TSS (NR_045699) -393 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-8 chr13 49272285 49272496 + 0.301029995663979 NA intron (NM_015759, intron 14 of 17) intron (NM_015759, intron 14 of 17) -23684 NM_028340 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-6 chr18 46958568 46959064 + 0.301029995663979 NA promoter-TSS (NM_178377) promoter-TSS (NM_178377) -60 NM_178377 69456 Mm.210734 NM_178377 ENSMUSG00000042705 Commd10 2310003A05Rik|AU019438|DRWMS2|Tg(Vav1-icre)A2Kio|Vav-cre|Vav-iCre|Vav1-Cre|VavCre COMM domain containing 10 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-12 chr6 118418872 118419343 + 0.301029995663979 NA intron (NM_194339, intron 1 of 22) intron (NM_194339, intron 1 of 22) 310 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-24 chr7 99353472 99353759 + 0.301029995663979 NA promoter-TSS (NM_009825) promoter-TSS (NM_009825) -376 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-6 chr12 40445564 40445754 + 0.301029995663979 NA promoter-TSS (NM_172803) promoter-TSS (NM_172803) 131 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-4 chr15 77855036 77855513 + 0.301029995663979 NA Intergenic Intergenic -13099 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-13 chr5 66089928 66090143 + 0.301029995663979 NA intron (NM_139065, intron 2 of 6) intron (NM_139065, intron 2 of 6) 8144 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-3 chr15 5219749 5220160 + 0.301029995663979 NA Intergenic Intergenic 24233 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding unique_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979 chr1 87848129 87848643 + 0.301029995663979 NA Intergenic Intergenic -4901 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979 chr1 162295431 162295918 + 0.301029995663979 NA intron (NM_001038619, intron 10 of 20) intron (NM_001038619, intron 10 of 20) 72306 NR_029796 387210 NR_029796 ENSMUSG00000065516 Mir214 Mirn214|mir-214|mmu-mir-214 microRNA 214 ncRNA unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-4 chr15 85335768 85336037 + 0.301029995663979 NA promoter-TSS (NM_016843) promoter-TSS (NM_016843) -479 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-11 chr14 70330316 70330532 + 0.301029995663979 NA intron (NM_144808, intron 2 of 9) intron (NM_144808, intron 2 of 9) 18009 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-5 chr18 60525607 60525987 + 0.301029995663979 NA promoter-TSS (NM_001357462) promoter-TSS (NM_001357462) -357 NM_026302 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-11 chr4 123571311 123571700 + 0.301029995663979 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -44915 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-16 chr9 110131284 110131566 + 0.301029995663979 NA promoter-TSS (NM_009211) promoter-TSS (NM_009211) -599 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979 chr1 93512277 93512898 + 0.301029995663979 NA intron (NM_145519, intron 1 of 26) intron (NM_145519, intron 1 of 26) 483 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-7 chr18 60525614 60525975 + 0.301029995663979 NA promoter-TSS (NM_001357462) promoter-TSS (NM_001357462) -360 NM_026302 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding common_peak2_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-5 chr17 4946819 4947168 + 0.301029995663979 NA Intergenic Intergenic -48081 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979 chr11 88291188 88291470 + 0.301029995663979 NA Intergenic Intergenic -2714 NM_028859 74297 Mm.207320 NM_028859 ENSMUSG00000034031 Ccdc182 1700106J16Rik coiled-coil domain containing 182 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-4 chr10 62299541 62299838 + 0.301029995663979 NA intron (NM_010438, intron 6 of 21) intron (NM_010438, intron 6 of 21) 40732 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-7 chr11 120352716 120353036 + 0.301029995663979 NA Intergenic Intergenic 4198 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-6 chr2 30743668 30743989 + 0.301029995663979 NA Intergenic Intergenic 22618 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-12 chr5 64232886 64233416 + 0.301029995663979 NA intron (NM_001289514, intron 1 of 18) intron (NM_001289514, intron 1 of 18) 2794 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-10 chr14 51984359 51984638 + 0.301029995663979 NA promoter-TSS (NM_198249) promoter-TSS (NM_198249) -335 NM_001145921 268739 Mm.9239 NM_198249 ENSMUSG00000004562 Arhgef40 E130112L23Rik|Gm669|Solo Rho guanine nucleotide exchange factor (GEF) 40 protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-19 chr2 173255553 173255821 + 0.301029995663979 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 20846 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-2 chr4 58196362 58196893 + 0.301029995663979 NA intron (NM_022814, intron 1 of 47) ID4|SINE|ID 9969 NM_022814 64817 Mm.261024 NM_022814 ENSMUSG00000028369 Svep1 1110021D17Rik|4833413O10Rik|AA387071|D430029O09Rik|Polydom sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding unique_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-9 chr19 45020815 45021111 + 0.301029995663979 NA intron (NM_001130526, intron 1 of 4) intron (NM_001130526, intron 1 of 4) 2828 NM_001130526 226154 Mm.28204 NM_145503 ENSMUSG00000035342 Lzts2 BC014695|LAPSER1|mKIAA1813 leucine zipper, putative tumor suppressor 2 protein-coding common_peak1_28_24_-0.0618881888242138_4.61291209536262_0.301029995663979-9 chr8 95080356 95080662 + 0.301029995663979 NA promoter-TSS (NM_028805) promoter-TSS (NM_028805) -692 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_33_28_-0.0481501377911204_4.83390592623201_0.301029995663979-10 chr7 119895138 119895460 + 0.301029995663979 NA promoter-TSS (NM_001285959) promoter-TSS (NM_001285959) 159 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding common_peak2_15_13_-0.0773148778398083_3.7686974831377_0.301029995663979-25 chr9 41157396 41157667 + 0.301029995663979 NA 5' UTR (NM_176860, exon 1 of 14) 5' UTR (NM_176860, exon 1 of 14) 531 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|STS-1|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-2 chr12 70827456 70827693 + 0.301029995663977 NA intron (NM_028127, intron 1 of 13) intron (NM_028127, intron 1 of 13) 2060 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-13 chr5 138622963 138623194 + 0.301029995663977 NA intron (NM_183025, intron 1 of 3) intron (NM_183025, intron 1 of 3) 219 NM_183025 243308 Mm.36612 NM_183025 ENSMUSG00000056014 A430033K04Rik C86988 RIKEN cDNA A430033K04 gene protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-2 chr1 183389004 183389392 + 0.301029995663977 NA intron (NM_001277958, intron 1 of 10) intron (NM_001277958, intron 1 of 10) 213 NM_001277958 21339 Mm.383556 NM_021466 ENSMUSG00000072258 Taf1a TAFI48|mTAFI48 TATA-box binding protein associated factor, RNA polymerase I, A protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-6 chr14 31658692 31658943 + 0.301029995663977 NA intron (NM_025295, intron 1 of 3) intron (NM_025295, intron 1 of 3) 17760 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-5 chr4 144929788 144930058 + 0.301029995663977 NA Intergenic Intergenic 36786 NM_001357277 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-11 chr17 69222744 69222974 + 0.301029995663977 NA intron (NM_001355736, intron 3 of 21) intron (NM_001355736, intron 3 of 21) 54347 NR_045428 69750 Mm.439063 NR_045428 ENSMUSG00000100572 2410021H03Rik - RIKEN cDNA 2410021H03 gene ncRNA unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-9 chr13 42300987 42301196 + 0.301029995663977 NA promoter-TSS (NM_010104) promoter-TSS (NM_010104) -385 NM_010104 13614 Mm.14543 NM_010104 ENSMUSG00000021367 Edn1 ET-1|PPET1|preproET endothelin 1 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977 chr11 76243236 76243563 + 0.301029995663977 NA promoter-TSS (NM_183263) promoter-TSS (NM_183263) 300 NM_026029 67201 Mm.482113 NM_026029 ENSMUSG00000017286 Glod4 1700082G03Rik|2700085E05Rik|C81254 glyoxalase domain containing 4 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-9 chr4 138465156 138465387 + 0.301029995663977 NA Intergenic Intergenic 10123 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-6 chr5 31565981 31566251 + 0.301029995663977 NA Intergenic Intergenic 5281 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-7 chr19 28630976 28631221 + 0.301029995663977 NA intron (NM_175459, intron 2 of 10) intron (NM_175459, intron 2 of 10) -47126 NR_045330 320176 Mm.406716 NR_045330 ENSMUSG00000097735 D930032P07Rik - RIKEN cDNA D930032P07 gene ncRNA common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-8 chr3 9146086 9146332 + 0.301029995663977 NA Intergenic Intergenic 84245 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-10 chr17 32993181 32993463 + 0.301029995663977 NA intron (NM_001045559, intron 1 of 3) intron (NM_001045559, intron 1 of 3) 183 NM_001045559 240067 Mm.246667 NM_199020 ENSMUSG00000053390 Zfp952 BC057593|C920016K16Rik zinc finger protein 952 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-19 chr9 75422891 75423393 + 0.301029995663977 NA Intergenic Intergenic 12958 NR_040719 71274 Mm.399152 NR_040719 ENSMUSG00000097021 4933433G15Rik 4921522K19Rik RIKEN cDNA 4933433G15 gene ncRNA common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-14 chr5 138756229 138756543 + 0.301029995663977 NA intron (NM_030565, intron 1 of 9) intron (NM_030565, intron 1 of 9) 1305 NM_001359593 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|GEF-CK|mKIAA4081 family with sequence similarity 20, member C protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-11 chr6 54039714 54039965 + 0.301029995663977 NA promoter-TSS (NM_001163640) promoter-TSS (NM_001163640) -93 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977 chr11 102894328 102894600 + 0.301029995663977 NA exon (NM_010277, exon 4 of 9) exon (NM_010277, exon 4 of 9) 2736 NM_001131020 14580 Mm.1239 NM_010277 ENSMUSG00000020932 Gfap AI836096 glial fibrillary acidic protein protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-11 chr3 116847941 116848149 + 0.301029995663977 NA Intergenic Intergenic -11522 NM_001113478 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-7 chr11 119777882 119778354 + 0.301029995663977 NA intron (NM_028898, intron 6 of 33) intron (NM_028898, intron 6 of 33) 56247 NR_045313 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-12 chr6 112944864 112945202 + 0.301029995663977 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 2233 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-4 chr17 53587461 53587692 + 0.301029995663977 NA intron (NM_001190846, intron 1 of 17) intron (NM_001190846, intron 1 of 17) 3450 NM_001190846 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-2 chr11 115475843 115476074 + 0.301029995663977 NA exon (NM_001361594, exon 1 of 3) exon (NM_001361594, exon 1 of 3) 291 NM_001361594 276905 Mm.38019 NM_177778 ENSMUSG00000057219 Armc7 A630084C13|BC023126 armadillo repeat containing 7 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-13 chr3 85638138 85638521 + 0.301029995663977 NA intron (NM_144896, intron 10 of 12) intron (NM_144896, intron 10 of 12) 64200 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-17 chr9 98433867 98434068 + 0.301029995663977 NA intron (NM_011254, intron 2 of 3) intron (NM_011254, intron 2 of 3) 11006 NM_011254 19659 Mm.279741 NM_011254 ENSMUSG00000046402 Rbp1 CRBPI|Crbp|Rbp-1 retinol binding protein 1, cellular protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-3 chr13 58273663 58274003 + 0.301029995663977 NA intron (NM_019832, intron 1 of 11) CpG 355 NM_019832 56278 Mm.296625 NM_019832 ENSMUSG00000021552 Gkap1 42kDa|4933400B15Rik|D13Ertd340e|Gkap42 G kinase anchoring protein 1 protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977 chr1 72832498 72832689 + 0.301029995663977 NA intron (NM_001310659, intron 1 of 3) intron (NM_001310659, intron 1 of 3) 7206 NM_001310659 16008 Mm.141936 NM_008342 ENSMUSG00000039323 Igfbp2 AI255832|IBP-2|Igfbp-2|mIGFBP-2 insulin-like growth factor binding protein 2 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-12 chr5 113214272 113214569 + 0.301029995663977 NA Intergenic Intergenic -12489 NM_001033428 333048 Mm.332586 NM_001033428 ENSMUSG00000066964 Tmem211 Gm854 transmembrane protein 211 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-3 chr12 8357161 8357420 + 0.301029995663977 NA Intergenic Intergenic 43857 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-12 chr19 60861328 60861745 + 0.301029995663977 NA promoter-TSS (NM_001362384) promoter-TSS (NM_001362384) -108 NM_053198 94281 Mm.48179 NM_053198 ENSMUSG00000063698 Sfxn4 - sideroflexin 4 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-5 chr2 26309201 26309479 + 0.301029995663977 NA Intergenic Intergenic -5271 NM_001355576 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-16 chr4 48473606 48473957 + 0.301029995663977 NA promoter-TSS (NM_001355741) promoter-TSS (NM_001355741) -318 NM_001355740 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-18 chr9 107956807 107957046 + 0.301029995663977 NA intron (NM_011634, intron 3 of 14) intron (NM_011634, intron 3 of 14) 5963 NM_011634 22036 Mm.297870 NM_011634 ENSMUSG00000032586 Traip Trip TRAF-interacting protein protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-6 chr2 60636463 60636698 + 0.301029995663977 NA intron (NM_021359, intron 7 of 14) intron (NM_021359, intron 7 of 14) 37113 NM_021359 16420 Mm.98193 NM_021359 ENSMUSG00000026971 Itgb6 2210409C20Rik|4831415H04Rik integrin beta 6 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-4 chr12 110447374 110447642 + 0.301029995663977 NA intron (NM_001135001, intron 1 of 13) CpG 329 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-15 chr4 46137456 46137710 + 0.301029995663977 NA promoter-TSS (NM_001033201) promoter-TSS (NM_001033201) 892 NM_173033 272027 Mm.249594 NM_173033 ENSMUSG00000035495 Tstd2 3010020C06 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-14 chrX 7766210 7766417 + 0.301029995663977 NA intron (NM_001271489, intron 2 of 9) intron (NM_001271489, intron 2 of 9) 2272 NM_001271491 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-10 chr3 89430651 89430873 + 0.301029995663977 NA promoter-TSS (NM_026869) promoter-TSS (NM_026869) 22 NM_001293767 68911 Mm.22521 NM_026869 ENSMUSG00000047824 Pygo2 1190004M21Rik pygopus 2 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-5 chr12 112606527 112606895 + 0.301029995663977 NA intron (NM_198411, intron 11 of 22) intron (NM_198411, intron 11 of 22) -13336 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-4 chr2 125278978 125279301 + 0.301029995663977 NA Intergenic Intergenic 31624 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-18 chr7 127745507 127745866 + 0.301029995663977 NA Intergenic Intergenic -1089 NM_172748 233902 Mm.259353 NM_172748 ENSMUSG00000030811 Fbxl19 6030430O11|BC059812|Fbl19 F-box and leucine-rich repeat protein 19 protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-3 chr2 69585308 69585589 + 0.301029995663977 NA intron (NM_001081088, intron 1 of 78) CpG 619 NM_001081088 14725 Mm.23847 NM_001081088 ENSMUSG00000027070 Lrp2 AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo low density lipoprotein receptor-related protein 2 protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-9 chr9 45828293 45828565 + 0.301029995663977 NA intron (NM_001081373, intron 1 of 29) CpG 209 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-6 chr11 103315028 103315325 + 0.301029995663977 NA Intergenic Intergenic 29526 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-14 chr3 95695038 95695301 + 0.301029995663977 NA Intergenic Intergenic -7252 NM_001301705 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-16 chr8 128113879 128114129 + 0.301029995663977 NA Intergenic Intergenic 164221 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-8 chr9 44478316 44478503 + 0.301029995663977 NA Intergenic Intergenic -4416 NM_001357490 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-2 chr11 116620876 116621110 + 0.301029995663977 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 3259 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-15 chr7 44998480 44998726 + 0.301029995663977 NA intron (NR_045611, intron 1 of 7) intron (NR_045611, intron 1 of 7) 955 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-3 chr11 31382588 31382826 + 0.301029995663977 NA Intergenic Intergenic -12646 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-5 chr11 100392802 100393169 + 0.301029995663977 NA intron (NM_010593, intron 1 of 13) intron (NM_010593, intron 1 of 13) 4805 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-7 chr6 70792356 70792592 + 0.301029995663977 NA promoter-TSS (NM_009075) promoter-TSS (NM_009075) -299 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-10 chr5 102576502 102576810 + 0.301029995663977 NA intron (NM_029270, intron 2 of 9) intron (NM_029270, intron 2 of 9) 95265 NM_029270 231532 Mm.440191 NM_029270 ENSMUSG00000057315 Arhgap24 0610025G21Rik Rho GTPase activating protein 24 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-8 chr12 80226010 80226254 + 0.301029995663977 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 34239 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-17 chr5 114647850 114648095 + 0.301029995663977 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 10449 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977 chr1 44585417 44585706 + 0.301029995663977 NA intron (NM_028450, intron 1 of 10) intron (NM_028450, intron 1 of 10) 33890 NM_028450 70676 Mm.133132 NM_027506 ENSMUSG00000056870 Gulp1 3110030A04Rik|5730529O06Rik|CED-6|Ced6|GULP|Gulp-2 GULP, engulfment adaptor PTB domain containing 1 protein-coding unique_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-4 chr11 55414202 55414442 + 0.301029995663977 NA intron (NM_009242, intron 1 of 9) intron (NM_009242, intron 1 of 9) 5758 NM_009242 20692 Mm.291442 NM_009242 ENSMUSG00000018593 Sparc BM-40|ON secreted acidic cysteine rich glycoprotein protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-9 chr3 51564134 51564448 + 0.301029995663977 NA intron (NR_033624, intron 3 of 4) intron (NR_033624, intron 3 of 4) -3468 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-8 chr3 137610968 137611279 + 0.301029995663977 NA Intergenic Intergenic -12549 NM_030143 73284 Mm.250841 NM_030143 ENSMUSG00000046818 Ddit4l 1700037B15Rik|1700108M02Rik|REDD2|RTP801L|Smhs1 DNA-damage-inducible transcript 4-like protein-coding unique_peak1_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-13 chr9 40799149 40799422 + 0.301029995663977 NA Intergenic Intergenic -1988 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_16_14_-0.0900047586988229_3.86188821625911_0.301029995663977-7 chr2 94158395 94158595 + 0.301029995663977 NA promoter-TSS (NM_019657) promoter-TSS (NM_019657) -586 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976 chr1 86504482 86504765 + 0.301029995663976 NA Intergenic Intergenic -21934 NR_153834 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-9 chr7 64998851 64999147 + 0.301029995663976 NA intron (NM_183087, intron 1 of 9) intron (NM_183087, intron 1 of 9) -125959 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Nsmce3 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Ndnl2|mage-g1 NSE3 homolog, SMC5-SMC6 complex component protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-3 chr11 31226287 31226608 + 0.301029995663976 NA Intergenic Intergenic 143614 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-7 chr17 34437682 34437983 + 0.301029995663976 NA intron (NM_001001177, intron 6 of 19) intron (NM_001001177, intron 6 of 19) 38105 NM_030746 632126 Mm.484958 NM_030746 ENSMUSG00000058435 Btnl4 Btn3a3|EG632126|NG11 butyrophilin-like 4 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-11 chr16 55632774 55633255 + 0.301029995663976 NA Intergenic Intergenic 138283 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-5 chr15 7864087 7864441 + 0.301029995663976 NA Intergenic Intergenic 48714 NM_001301357 14573 Mm.4679 NM_010275 ENSMUSG00000022144 Gdnf AI385739|ATF glial cell line derived neurotrophic factor protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-5 chr11 108364777 108364990 + 0.301029995663976 NA Intergenic Intergenic -20995 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-9 chr3 53065203 53065613 + 0.301029995663976 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 23861 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968|Lhfpl6 lipoma HMGIC fusion partner protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-11 chr2 103661820 103662199 + 0.301029995663976 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 95699 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-2 chr10 111364882 111365160 + 0.301029995663976 NA Intergenic Intergenic 66342 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-2 chr1 182513878 182514069 + 0.301029995663976 NA intron (NM_009794, intron 1 of 20) intron (NM_009794, intron 1 of 20) 3637 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|CALP80|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-7 chr17 57249703 57249989 + 0.301029995663976 NA intron (NM_001242390, intron 1 of 14) intron (NM_001242390, intron 1 of 14) 395 NM_001242389 106628 Mm.37368 NM_134125 ENSMUSG00000019487 Trip10 AI646975|Cip4 thyroid hormone receptor interactor 10 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-12 chr8 25010558 25010773 + 0.301029995663976 NA intron (NM_001270996, intron 1 of 21) intron (NM_001270996, intron 1 of 21) 6257 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-8 chr15 75820434 75820697 + 0.301029995663976 NA intron (NM_172121, intron 3 of 11) intron (NM_172121, intron 3 of 11) 21343 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-10 chr5 5749709 5749919 + 0.301029995663976 NA promoter-TSS (NM_027399) promoter-TSS (NM_027399) -497 NM_027399 70358 Mm.85429 NM_027399 ENSMUSG00000015652 Steap1 2410007B19Rik|Prss24|Steap six transmembrane epithelial antigen of the prostate 1 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-9 chr13 21200444 21200643 + 0.301029995663976 NA Intergenic CpG 20612 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-2 chr10 116219066 116219359 + 0.301029995663976 NA intron (NM_001358484, intron 5 of 12) intron (NM_001358484, intron 5 of 12) 41861 NM_001161840 19279 Mm.336316 NM_011217 ENSMUSG00000020151 Ptprr Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213 protein tyrosine phosphatase, receptor type, R protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-10 chr5 105875981 105876433 + 0.301029995663976 NA promoter-TSS (NM_018759) promoter-TSS (NM_018759) -361 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976 chr1 186584314 186584679 + 0.301029995663976 NA Intergenic Intergenic -25815 NR_131158 320449 Mm.404477 NR_131124 ENSMUSG00000103690 A730004F24Rik - RIKEN cDNA A730004F24 gene ncRNA common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976 chr1 193518438 193518811 + 0.301029995663976 NA Intergenic Intergenic -11094 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-13 chr7 114712268 114712549 + 0.301029995663976 NA Intergenic Intergenic -6235 NM_054084 116903 Mm.273838 NM_054084 ENSMUSG00000030666 Calcb CGRP2|Calc2 calcitonin-related polypeptide, beta protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-16 chr7 44819187 44819396 + 0.301029995663976 NA intron (NM_001171024, intron 1 of 8) intron (NM_001171024, intron 1 of 8) -2633 NR_033136 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding common_peak1_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-2 chr15 76294372 76295045 + 0.301029995663976 NA exon (NM_001195537, exon 1 of 7) exon (NM_001195537, exon 1 of 7) 274 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-5 chr12 13211682 13212156 + 0.301029995663976 NA Intergenic Intergenic 37255 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-6 chr12 86851017 86851218 + 0.301029995663976 NA Intergenic Intergenic 33697 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_76_63_-0.0191655478288109_5.99041722608559_0.301029995663976 chr10 82629862 82630587 + 0.301029995663976 NA intron (NM_001358517, intron 1 of 9) CpG 382 NR_037190 624784 Mm.284252 NR_037190 Gm9855 - thymine DNA glycosylase pseudogene pseudo common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-19 chr8 70774077 70774387 + 0.301029995663976 NA intron (NM_008841, intron 2 of 15) ID_B1|SINE|B4 2480 NM_008841 18709 Mm.12945 NM_008841 ENSMUSG00000031834 Pik3r2 p85beta phosphoinositide-3-kinase regulatory subunit 2 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-14 chr7 4136545 4136772 + 0.301029995663976 NA promoter-TSS (NM_172736) promoter-TSS (NM_172736) 268 NR_033548 100037396 Mm.447887 NR_033548 ENSMUSG00000085886 D030047H15Rik Gm15924 RIKEN cDNA D030047H15 gene ncRNA common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-4 chr11 103033409 103034034 + 0.301029995663976 NA intron (NM_008707, intron 1 of 11) B1_Mus2|SINE|Alu 5178 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-10 chr2 165287504 165287783 + 0.301029995663976 NA TTS (NM_207706) TTS (NM_207706) 144 NM_001252574 228875 Mm.21184 NM_144893 ENSMUSG00000017664 Slc35c2 C85957|CGI-15|D2Wsu58e|Ovcov1 solute carrier family 35, member C2 protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976 chr1 105993681 105993935 + 0.301029995663976 NA intron (NM_001122675, intron 1 of 12) CpG 3402 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-4 chr16 13667543 13667850 + 0.301029995663976 NA intron (NM_001358453, intron 1 of 22) intron (NM_001358453, intron 1 of 22) 474 NM_001358452 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-7 chr13 119143810 119144205 + 0.301029995663976 NA Intergenic Intergenic 265004 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000116207 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-11 chr5 146974239 146974451 + 0.301029995663976 NA Intergenic Intergenic -10490 NM_001359467 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-12 chr7 96951665 96952063 + 0.301029995663976 NA exon (NM_153591, exon 1 of 14) exon (NM_153591, exon 1 of 14) 337 NM_153591 244141 Mm.274864 NM_153591 ENSMUSG00000018995 Nars2 AI875199 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-12 chr9 32700753 32700971 + 0.301029995663976 NA intron (NM_001038642, intron 1 of 6) intron (NM_001038642, intron 1 of 6) 4820 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-18 chr7 130946849 130947056 + 0.301029995663976 NA intron (NM_019564, intron 1 of 8) intron (NM_019564, intron 1 of 8) 10749 NM_019564 56213 Mm.30156 NM_019564 ENSMUSG00000006205 Htra1 AI429470|HTRA|L56|Prss11|RSPP11 HtrA serine peptidase 1 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-5 chr11 97935476 97935742 + 0.301029995663976 NA intron (NM_001163608, intron 9 of 13) intron (NM_001163608, intron 9 of 13) 50837 NM_028199 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak1_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976 chr10 120616787 120617518 + 0.301029995663976 NA Intergenic Intergenic -140683 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-7 chr15 36373453 36373697 + 0.301029995663976 NA Intergenic Intergenic -90428 NM_001357631 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_77_64_-0.0230490159191303_6.01084330506889_0.301029995663976-2 chr7 19714745 19715370 + 0.301029995663976 NA exon (NM_016871, exon 2 of 10) exon (NM_016871, exon 2 of 10) 372 NM_001109748 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-13 chr6 125161987 125162207 + 0.301029995663976 NA TTS (NM_001302779) TTS (NM_001302779) 3676 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-6 chr15 13287948 13288334 + 0.301029995663976 NA Intergenic Intergenic -114466 NM_007666 12563 Mm.57048 NM_007666 ENSMUSG00000039385 Cdh6 cad6 cadherin 6 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-4 chr12 105786243 105786476 + 0.301029995663976 NA intron (NM_011112, intron 1 of 21) intron (NM_011112, intron 1 of 21) 1662 NM_001347440 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-12 chr17 78521433 78521885 + 0.301029995663976 NA intron (NM_001197028, intron 1 of 12) intron (NM_001197028, intron 1 of 12) 13596 NM_028813 74199 Mm.292983 NM_028813 ENSMUSG00000024076 Vit 1700052E02Rik|1700110E08Rik|2810429K11Rik|AKH|akhirin vitrin protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-2 chr11 48800905 48801223 + 0.301029995663976 NA promoter-TSS (NR_028563) promoter-TSS (NR_028563) 704 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-13 chr19 34551794 34551996 + 0.301029995663976 NA intron (NM_001355262, intron 1 of 2) intron (NM_001355262, intron 1 of 2) 807 NM_001355262 15958 Mm.2036 NM_008332 ENSMUSG00000045932 Ifit2 AV302338|Ifi54|P54 interferon-induced protein with tetratricopeptide repeats 2 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-2 chr1 16272402 16272609 + 0.301029995663976 NA intron (NM_001111272, intron 11 of 12) intron (NM_001111272, intron 11 of 12) 166623 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-6 chr13 44733215 44733424 + 0.301029995663976 NA intron (NM_001205043, intron 1 of 17) intron (NM_001205043, intron 1 of 17) 2048 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak2_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-4 chr9 40191912 40192799 + 0.301029995663976 NA promoter-TSS (NM_030713) promoter-TSS (NM_030713) 39 NM_030713 80902 Mm.132196 NM_030713 ENSMUSG00000025602 Zfp202 C130037E22Rik|Znf202 zinc finger protein 202 protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-7 chr13 51972463 51972672 + 0.301029995663976 NA Intergenic Intergenic -124174 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-3 chr11 60416718 60416990 + 0.301029995663976 NA promoter-TSS (NM_025757) promoter-TSS (NM_025757) 245 NM_145427 246782 Mm.41651 NM_145427 ENSMUSG00000042709 Atpaf2 ATP12|ATP12p ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-6 chr12 110696653 110696876 + 0.301029995663976 NA promoter-TSS (NM_010480) promoter-TSS (NM_010480) -369 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-4 chr11 59459986 59460264 + 0.301029995663976 NA Intergenic AT_rich|Low_complexity|Low_complexity 10080 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-21 chr8 67749566 67749828 + 0.301029995663976 NA intron (NM_177698, intron 10 of 14) MER2B|DNA|TcMar-Tigger 68598 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-4 chr11 69882367 69882635 + 0.301029995663976 NA promoter-TSS (NR_105889) promoter-TSS (NR_105889) -407 NR_105889 102466208 NR_105889 ENSMUSG00000104996 Mir6924 mmu-mir-6924 microRNA 6924 ncRNA unique_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-4 chr4 11826703 11827221 + 0.301029995663976 NA Intergenic Intergenic 68805 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-4 chr1 160907372 160907656 + 0.301029995663976 NA intron (NM_001024952, intron 1 of 19) intron (NM_001024952, intron 1 of 19) 1103 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-7 chr2 165874260 165874726 + 0.301029995663976 NA intron (NM_001252587, intron 2 of 11) intron (NM_001252587, intron 2 of 11) 3944 NM_001291158 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-10 chr4 136332959 136333220 + 0.301029995663976 NA intron (NM_001355182, intron 8 of 10) intron (NM_001355182, intron 8 of 10) 21491 NM_001355182 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-11 chr7 45103271 45103661 + 0.301029995663976 NA intron (NM_001357117, intron 1 of 6) intron (NM_001357117, intron 1 of 6) 356 NM_001357117 14132 Mm.3303 NM_010189 ENSMUSG00000003420 Fcgrt FcRn Fc receptor, IgG, alpha chain transporter protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-17 chr5 36375263 36375486 + 0.301029995663976 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 22765 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-4 chr3 121697571 121698191 + 0.301029995663976 NA Intergenic Intergenic -25656 NM_010171 14066 Mm.273188 NM_010171 ENSMUSG00000028128 F3 AA409063|CD142|Cf-3|Cf3|TF coagulation factor III protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-18 chr7 97069613 97070155 + 0.301029995663976 NA Intergenic Intergenic -11867 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak2_76_63_-0.0191655478288109_5.99041722608559_0.301029995663976-2 chr19 5925024 5926170 + 0.301029995663976 NA promoter-TSS (NM_026772) promoter-TSS (NM_026772) -781 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-4 chr15 39043476 39043686 + 0.301029995663976 NA Intergenic Intergenic -33351 NM_026778 68588 Mm.41556 NM_026778 ENSMUSG00000054196 Cthrc1 1110014B07Rik collagen triple helix repeat containing 1 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-8 chr3 65659234 65659742 + 0.301029995663976 NA TTS (NR_106200) TTS (NR_106200) 200 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-10 chr7 28920525 28920855 + 0.301029995663976 NA intron (NM_021895, intron 1 of 20) intron (NM_021895, intron 1 of 20) 39034 NM_001110807 60594 Mm.476990 NM_021894 ENSMUSG00000054083 Capn12 CANP 12 calpain 12 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-14 chr9 22085033 22085254 + 0.301029995663976 NA non-coding (NR_040406, exon 4 of 4) non-coding (NR_040406, exon 4 of 4) 284 NM_001253898 26940 Mm.425568 NM_012029 ENSMUSG00000066839 Ecsit Sitpec ECSIT signalling integrator protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-14 chr8 94600632 94600884 + 0.301029995663976 NA intron (NM_028221, intron 1 of 7) intron (NM_028221, intron 1 of 7) 968 NM_028221 102122 Mm.250425 NM_028221 ENSMUSG00000031774 Fam192a 1700001O11Rik|2310065K24Rik|AI596259|Nip30 family with sequence similarity 192, member A protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-12 chr5 136049423 136049725 + 0.301029995663976 NA Intergenic B1_Mur1|SINE|Alu -7693 NM_027158 69665 Mm.75713 NM_027158 ENSMUSG00000006143 Upk3bl 2310043J07Rik|Upk3bl1 uroplakin 3B-like protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976 chr1 136131379 136131710 + 0.301029995663976 NA promoter-TSS (NR_046167) promoter-TSS (NR_046167) 154 NR_153829 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak2_76_63_-0.0191655478288109_5.99041722608559_0.301029995663976-3 chr2 152105426 152106161 + 0.301029995663976 NA exon (NM_029688, exon 1 of 2) exon (NM_029688, exon 1 of 2) 269 NM_029688 76650 Mm.218639 NM_029688 ENSMUSG00000032802 Srxn1 1700127B04Rik|AI854065|AW488194|Npn3|Srx|Srx1|TX01 sulfiredoxin 1 homolog (S. cerevisiae) protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-14 chr6 97305022 97305301 + 0.301029995663976 NA exon (NM_001346637, exon 17 of 23) exon (NM_001346637, exon 17 of 23) -52381 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-7 chr18 75658896 75659250 + 0.301029995663976 NA intron (NM_201354, intron 1 of 11) intron (NM_201354, intron 1 of 11) 38623 NM_201354 269037 Mm.36745 NM_201354 ENSMUSG00000052928 Ctif Gm672 CBP80/20-dependent translation initiation factor protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-8 chr2 25181620 25181902 + 0.301029995663976 NA 3' UTR (NM_025980, exon 1 of 1) 3' UTR (NM_025980, exon 1 of 1) 1003 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-5 chr11 115699688 115700173 + 0.301029995663976 NA promoter-TSS (NM_001313937) promoter-TSS (NM_001313937) -2 NM_001313936 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding unique_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976 chr18 36446792 36447254 + 0.301029995663976 NA intron (NM_026027, intron 2 of 3) intron (NM_026027, intron 2 of 3) 7472 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-15 chr9 33851220 33851435 + 0.301029995663976 NA Intergenic Intergenic -191044 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik TH-cre|Tg(Th-cre)1Tmd RIKEN cDNA 7630403G23 gene ncRNA unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-6 chr2 137112443 137112847 + 0.301029995663976 NA intron (NM_013822, intron 2 of 25) intron (NM_013822, intron 2 of 25) 3875 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-2 chr10 127500462 127500750 + 0.301029995663976 NA Intergenic Intergenic -1080 NM_001359751 237611 Mm.32087 NM_177707 ENSMUSG00000040287 Stac3 9830125E18 SH3 and cysteine rich domain 3 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976 chr1 16181077 16181366 + 0.301029995663976 NA Intergenic Intergenic 75339 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-15 chr6 115270404 115270672 + 0.301029995663976 NA intron (NM_001111015, intron 10 of 12) intron (NM_001111015, intron 10 of 12) -18333 NM_001356406 110595 Mm.255607 NM_080639 ENSMUSG00000030317 Timp4 Timp-4 tissue inhibitor of metalloproteinase 4 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-5 chr17 66371407 66371603 + 0.301029995663976 NA intron (NM_172963, intron 6 of 13) intron (NM_172963, intron 6 of 13) 78245 NM_172963 68617 Mm.33421 NM_172963 ENSMUSG00000052105 Mtcl1 1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25 microtubule crosslinking factor 1 protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-10 chr5 29861249 29861550 + 0.301029995663976 NA Intergenic Intergenic -125463 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993 predicted gene 5129 ncRNA common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-6 chr17 78392135 78392555 + 0.301029995663976 NA intron (NM_001360407, intron 5 of 9) intron (NM_001360407, intron 5 of 9) 25807 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_78_65_-0.026826453083177_6.03098089281687_0.301029995663976-2 chr14 32513456 32514174 + 0.301029995663976 NA intron (NM_001081221, intron 1 of 20) CpG 294 NM_001081221 319955 Mm.318310 NM_001081221 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-20 chr7 125581219 125581513 + 0.301029995663976 NA Intergenic CpG -22063 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-7 chr13 54790205 54790572 + 0.301029995663976 NA intron (NM_028841, intron 1 of 7) intron (NM_028841, intron 1 of 7) 983 NM_028841 74257 Mm.32883 NM_028841 ENSMUSG00000025875 Tspan17 2210021G21Rik|AI047581|Fbxo23|Tm4sf17 tetraspanin 17 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-6 chr16 91597471 91597671 + 0.301029995663976 NA intron (NM_030018, intron 1 of 6) CpG 109 NM_030018 77975 Mm.290341 NM_030018 ENSMUSG00000022964 Tmem50b AU015466|AU019872|B230114J08Rik transmembrane protein 50B protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-3 chr1 176817873 176818084 + 0.301029995663976 NA intron (NM_001357390, intron 1 of 18) intron (NM_001357390, intron 1 of 18) 3318 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak2_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-2 chr11 31502175 31502690 + 0.301029995663976 NA Intergenic Intergenic -132371 NM_011491 20856 Mm.32506 NM_011491 ENSMUSG00000020303 Stc2 AW125853|Stc-2|Stc2l|mustc2 stanniocalcin 2 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-8 chr16 45874192 45874451 + 0.301029995663976 NA Intergenic Intergenic -29570 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-7 chr12 104262868 104263134 + 0.301029995663976 NA promoter-TSS (NM_001199940) promoter-TSS (NM_001199940) -121 NM_001199940 628900 Mm.436602 NM_001199940 ENSMUSG00000079014 Serpina3i 2B2|EG628900|Gm6930 serine (or cysteine) peptidase inhibitor, clade A, member 3I protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-15 chr3 56962317 56962504 + 0.301029995663976 NA Intergenic Intergenic 339578 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-9 chr2 156839987 156840287 + 0.301029995663976 NA 5' UTR (NM_173396, exon 1 of 3) 5' UTR (NM_173396, exon 1 of 3) 130 NM_173396 228839 Mm.315625 NM_173396 ENSMUSG00000062175 Tgif2 4921501K24|5730599O09Rik|C80753|C81206 TGFB-induced factor homeobox 2 protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-8 chr2 125212060 125212565 + 0.301029995663976 NA intron (NM_001079690, intron 21 of 27) intron (NM_001079690, intron 21 of 27) -34936 NM_001159646 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-4 chr11 84078671 84078932 + 0.301029995663976 NA TTS (NM_172562) TTS (NM_172562) -10444 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-5 chr16 21793960 21794233 + 0.301029995663976 NA promoter-TSS (NR_037957) promoter-TSS (NR_037957) -251 NR_037958 100043489 Mm.326535 NR_037957 ENSMUSG00000097290 1300002E11Rik 1500026P21Rik RIKEN cDNA 1300002E11 gene ncRNA unique_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-2 chr1 132286194 132286645 + 0.301029995663976 NA Intergenic Intergenic -12207 NM_144810 213417 Mm.39723 NM_144810 ENSMUSG00000042115 Klhdc8a A630065K24Rik kelch domain containing 8A protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976 chr1 119648261 119648457 + 0.301029995663976 NA intron (NM_145506, intron 1 of 24) CpG 641 NM_001113416 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-17 chr5 113735844 113736383 + 0.301029995663976 NA intron (NM_001010825, intron 1 of 2) MIRb|SINE|MIR 331 NM_001010825 231630 Mm.21926 NM_001010825 ENSMUSG00000053334 Ficd D5Ertd40e|Hype FIC domain containing protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-19 chr7 99356824 99357051 + 0.301029995663976 NA Intergenic Intergenic -3698 NM_001111044 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-23 chrX 104483080 104483596 + 0.301029995663976 NA exon (NM_001081189, exon 1 of 7) exon (NM_001081189, exon 1 of 7) 556 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-13 chr6 121045697 121045973 + 0.301029995663976 NA intron (NM_001270475, intron 1 of 31) intron (NM_001270475, intron 1 of 31) -18629 NR_138098 100043793 Mm.448053 NR_138098 Gm4651 - predicted gene 4651 ncRNA common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-2 chr10 60824785 60825197 + 0.301029995663976 NA intron (NM_029770, intron 1 of 16) intron (NM_029770, intron 1 of 16) 6590 NM_029770 107449 Mm.290433 NM_029770 ENSMUSG00000020099 Unc5b 6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2 unc-5 netrin receptor B protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976 chr1 184140437 184140648 + 0.301029995663976 NA Intergenic Intergenic 106161 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-11 chr14 54065550 54065844 + 0.301029995663976 NA Intergenic Intergenic 188232 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976 chr1 72756237 72756523 + 0.301029995663976 NA Intergenic Intergenic 45120 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976 chr10 39417010 39417539 + 0.301029995663976 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 47475 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-6 chr13 51858499 51858702 + 0.301029995663976 NA Intergenic Intergenic 11925 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-12 chr6 89351386 89351652 + 0.301029995663976 NA intron (NM_008881, intron 3 of 31) intron (NM_008881, intron 3 of 31) 11094 NM_008881 18844 Mm.3789 NM_008881 ENSMUSG00000030084 Plxna1 2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053 plexin A1 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-5 chr17 29169405 29170098 + 0.301029995663976 NA intron (NM_001360239, intron 13 of 21) intron (NM_001360239, intron 13 of 21) 34695 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding common_peak2_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-3 chr11 35834036 35834484 + 0.301029995663976 NA intron (NM_025936, intron 1 of 14) intron (NM_025936, intron 1 of 14) 268 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-9 chr4 152260768 152261038 + 0.301029995663976 NA exon (NM_001146057, exon 8 of 9) exon (NM_001146057, exon 8 of 9) -13459 NM_178406 100129 Mm.23235 NM_178406 ENSMUSG00000042804 Gpr153 1110065N12Rik|AI449320|PGR1 G protein-coupled receptor 153 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-9 chr16 6888955 6889261 + 0.301029995663976 NA intron (NM_001359730, intron 4 of 15) intron (NM_001359730, intron 4 of 15) -150262 NM_001359729 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-11 chr9 70834367 70834851 + 0.301029995663976 NA intron (NM_001324473, intron 1 of 8) intron (NM_001324473, intron 1 of 8) 100199 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-8 chr17 80762839 80763285 + 0.301029995663976 NA Intergenic Intergenic -35037 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-14 chr19 41850371 41850605 + 0.301029995663976 NA Intergenic Intergenic -2356 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-6 chr18 34930304 34930518 + 0.301029995663976 NA intron (NM_144866, intron 2 of 10) intron (NM_144866, intron 2 of 10) 1592 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding unique_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-5 chr4 124802094 124802352 + 0.301029995663976 NA promoter-TSS (NM_008636) promoter-TSS (NM_008636) -326 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-6 chr16 4599264 4599541 + 0.301029995663976 NA intron (NM_031184, intron 1 of 6) intron (NM_031184, intron 1 of 6) 4689 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-3 chr1 37865433 37865629 + 0.301029995663976 NA promoter-TSS (NM_207228) promoter-TSS (NM_207228) -233 NM_001290720 211484 Mm.332756 NM_207228 ENSMUSG00000060771 Tsga10 4933432N21Rik|AI843383|Gm217|Mtsga10 testis specific 10 protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-4 chr13 34683716 34684037 + 0.301029995663976 NA Intergenic Intergenic 30953 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 - predicted gene 15908 ncRNA common_peak2_77_64_-0.0230490159191303_6.01084330506889_0.301029995663976-2 chr7 46795729 46796620 + 0.301029995663976 NA promoter-TSS (NM_001291075) promoter-TSS (NM_001291075) 80 NM_001360076 14884 Mm.22700 NM_008186 ENSMUSG00000006599 Gtf2h1 62kDa|AW743425|AW822074|BTF2 p62|C77871|p62 general transcription factor II H, polypeptide 1 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-12 chr4 65604504 65604828 + 0.301029995663976 NA promoter-TSS (NM_001161782) promoter-TSS (NM_001161782) -320 NM_053084 69807 Mm.22786 NM_053084 ENSMUSG00000051675 Trim32 1810045E12Rik|3f3|BBS11|Zfp117 tripartite motif-containing 32 protein-coding common_peak1_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-6 chr4 108847881 108848564 + 0.301029995663976 NA exon (NM_029571, exon 1 of 1) exon (NM_029571, exon 1 of 1) 365 NM_029571 100087 Mm.440007 NM_029571 ENSMUSG00000073775 Kti12 1110001A12Rik|AI326810|AU014758 KTI12 homolog, chromatin associated protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-8 chr5 143464639 143464926 + 0.301029995663976 NA intron (NM_144915, intron 1 of 14) CpG 289 NM_144915 231871 Mm.469963 NM_144915 ENSMUSG00000039206 Daglb E330036I19Rik diacylglycerol lipase, beta protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-14 chr8 36743336 36743669 + 0.301029995663976 NA intron (NM_001194940, intron 5 of 17) intron (NM_001194940, intron 5 of 17) -10448 NM_001194941 50768 Mm.125155 NM_015802 ENSMUSG00000031523 Dlc1 A730069N07Rik|Arhgap7|HP|STARD12|dlc-1 deleted in liver cancer 1 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-2 chr1 134104243 134104463 + 0.301029995663976 NA Intergenic Intergenic -6889 NM_001284525 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-10 chr19 44753664 44754000 + 0.301029995663976 NA Intergenic Intergenic -3562 NM_011037 18504 Mm.192158 NM_011037 ENSMUSG00000004231 Pax2 Opdc|Pax-2 paired box 2 protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-9 chr2 29251604 29251855 + 0.301029995663976 NA intron (NR_029460, intron 1 of 1) CpG 1264 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-3 chr11 53324738 53325004 + 0.301029995663976 NA intron (NM_026479, intron 1 of 3) intron (NM_026479, intron 1 of 3) 182 NM_026479 67966 Mm.288072 NM_026479 ENSMUSG00000018239 Zcchc10 2410141K03Rik|AA675321|D11Ertd416e zinc finger, CCHC domain containing 10 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-3 chr11 4317818 4318106 + 0.301029995663976 NA Intergenic Intergenic 51166 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-4 chr13 70835791 70836005 + 0.301029995663976 NA intron (NM_172053, intron 3 of 22) intron (NM_172053, intron 3 of 22) 5913 NM_172053 271127 Mm.115970 NM_172053 ENSMUSG00000049538 Adamts16 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-16 chr4 82442622 82442959 + 0.301029995663976 NA intron (NM_001286131, intron 2 of 9) intron (NM_001286131, intron 2 of 9) 62989 NM_001286127 18028 Mm.317947 NM_008687 ENSMUSG00000008575 Nfib 6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B nuclear factor I/B protein-coding unique_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976 chr1 88094760 88095268 + 0.301029995663976 NA promoter-TSS (NM_201642) promoter-TSS (NM_201642) 13 NM_201642 394432 Mm.300095 NM_201642 ENSMUSG00000090124 Ugt1a7c A10'|A13|Ugt1a10 UDP glucuronosyltransferase 1 family, polypeptide A7C protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-3 chr11 78696845 78697176 + 0.301029995663976 NA 5' UTR (NM_008702, exon 1 of 11) 5' UTR (NM_008702, exon 1 of 11) 415 NM_008702 18099 Mm.9001 NM_008702 ENSMUSG00000017376 Nlk AI194375 nemo like kinase protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-3 chr11 120149865 120150429 + 0.301029995663976 NA intron (NM_001361699, intron 1 of 16) intron (NM_001361699, intron 1 of 16) 1204 NM_001361698 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-11 chr4 88935181 88935393 + 0.301029995663976 NA intron (NR_132735, intron 1 of 2) intron (NR_132735, intron 1 of 2) 6755 NR_132734 106557447 Mm.484668 NR_132734 LOC106557447 - uncharacterized LOC106557447 ncRNA common_peak1_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-3 chr2 112239433 112240120 + 0.301029995663976 NA promoter-TSS (NM_207206) promoter-TSS (NM_207206) -65 NM_207206 99010 Mm.33438 NM_207206 ENSMUSG00000027134 Lpcat4 AI505034|Agpat7|Aytl3|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-13 chr4 116824483 116824812 + 0.301029995663976 NA Intergenic Intergenic -3139 NM_146256 242642 Mm.279897 NM_146256 ENSMUSG00000043155 Hpdl A830048M07Rik|BC034099|Gloxd1 4-hydroxyphenylpyruvate dioxygenase-like protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-7 chr2 137730513 137730710 + 0.301029995663976 NA Intergenic Intergenic -525973 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-10 chr14 28031922 28032229 + 0.301029995663976 NA intron (NM_001347497, intron 12 of 19) intron (NM_001347497, intron 12 of 19) 409668 NM_177814 238988 Mm.318004 NM_177814 ENSMUSG00000040640 Erc2 6430531D06|CAST|CAST1/ERC2|D14Ertd171e|ELKS2alpha ELKS/RAB6-interacting/CAST family member 2 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-8 chr13 15776392 15776608 + 0.301029995663976 NA Intergenic Intergenic 26130 NR_045507 71071 Mm.380845 NR_045507 ENSMUSG00000113960 4933412O06Rik - RIKEN cDNA 4933412O06 gene ncRNA common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-13 chr8 68306986 68307260 + 0.301029995663976 NA intron (NM_028182, intron 4 of 8) B1_Mus1|SINE|Alu 30595 NM_028182 72281 Mm.40974 NM_028182 ENSMUSG00000053886 Sh2d4a 2210402M20Rik|SH2A SH2 domain containing 4A protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-5 chr19 42058193 42058600 + 0.301029995663976 NA intron (NM_026152, intron 1 of 6) intron (NM_026152, intron 1 of 6) 6168 NM_025752 66765 Mm.440412 NM_025752 ENSMUSG00000090369 4933411K16Rik - RIKEN cDNA 4933411K16 gene protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-20 chr8 10534477 10534714 + 0.301029995663976 NA intron (NM_001319151, intron 28 of 34) intron (NM_001319151, intron 28 of 34) 347859 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak1_78_65_-0.026826453083177_6.03098089281687_0.301029995663976 chr10 16544722 16545434 + 0.301029995663976 NA Intergenic Intergenic 550704 NR_038020 100504235 Mm.84044 NR_038020 ENSMUSG00000101969 Gm20125 - predicted gene, 20125 ncRNA unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-10 chr2 158233497 158233797 + 0.301029995663976 NA Intergenic Intergenic -4423 NM_177657 228846 Mm.187574 NM_177657 ENSMUSG00000037813 D630003M21Rik - RIKEN cDNA D630003M21 gene protein-coding common_peak2_77_64_-0.0230490159191303_6.01084330506889_0.301029995663976 chr15 97907503 97908279 + 0.301029995663976 NA intron (NM_009504, intron 1 of 9) intron (NM_009504, intron 1 of 9) 405 NM_009504 22337 Mm.245084 NM_009504 ENSMUSG00000022479 Vdr Nr1i1 vitamin D (1,25-dihydroxyvitamin D3) receptor protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-16 chr9 111994166 111994372 + 0.301029995663976 NA Intergenic Intergenic 124442 NR_029823 723815 NR_029823 ENSMUSG00000065441 Mir128-2 Mirn128-2|Mirn128b|mir-128-2|mir-128b microRNA 128-2 ncRNA unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-14 chr9 7679187 7679412 + 0.301029995663976 NA intron (NR_126562, intron 1 of 3) MIRb|SINE|MIR -12791 NM_010810 17393 Mm.4825 NM_010810 ENSMUSG00000018623 Mmp7 MAT|MMP-7 matrix metallopeptidase 7 protein-coding unique_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-2 chr2 160222045 160222665 + 0.301029995663976 NA Intergenic Intergenic 105139 NM_001033411 329554 Mm.291144 NM_001033411 ENSMUSG00000074623 Gm826 - predicted gene 826 protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-5 chr14 76715313 76715521 + 0.301029995663976 NA Intergenic Intergenic 37849 NR_015485 73272 Mm.116804 NR_015485 ENSMUSG00000101009 1700108F19Rik 1700020I02Rik|BB065030 RIKEN cDNA 1700108F19 gene ncRNA common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-17 chr7 80375563 80375983 + 0.301029995663976 NA Intergenic Intergenic -4398 NM_172903 140481 Mm.269245 NM_172903 ENSMUSG00000038886 Man2a2 1700052O22Rik|4931438M07Rik|AI480988|MX|Man IIx mannosidase 2, alpha 2 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-8 chr17 65884092 65884351 + 0.301029995663976 NA intron (NM_009067, intron 1 of 9) CpG 702 NM_001198949 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-6 chr12 81750270 81750708 + 0.301029995663976 NA intron (NM_001174107, intron 2 of 10) intron (NM_001174107, intron 2 of 10) 30681 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-16 chr8 121630485 121630724 + 0.301029995663976 NA intron (NM_080855, intron 1 of 12) PB1D9|SINE|Alu 21329 NM_080855 142682 Mm.103202 NM_080855 ENSMUSG00000061410 Zcchc14 AA792890|BDG29 zinc finger, CCHC domain containing 14 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-8 chr3 58690705 58690906 + 0.301029995663976 NA intron (NM_009174, intron 1 of 1) intron (NM_009174, intron 1 of 1) 1583 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 siah E3 ubiquitin protein ligase 2 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-22 chr8 122541478 122541774 + 0.301029995663976 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 9703 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-4 chr15 75616794 75617125 + 0.301029995663976 NA 5' UTR (NM_011759, exon 1 of 3) 5' UTR (NM_011759, exon 1 of 3) 275 NM_011759 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-3 chr15 80137552 80138157 + 0.301029995663976 NA intron (NM_025609, intron 1 of 10) intron (NM_025609, intron 1 of 10) 4700 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-4 chr11 102948541 102949169 + 0.301029995663976 NA Intergenic Intergenic -2394 NM_011795 23829 Mm.57154 NM_011795 ENSMUSG00000045532 C1ql1 C1qrf|CRF|CTRP14|gliacolin complement component 1, q subcomponent-like 1 protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-8 chr19 36554182 36554503 + 0.301029995663976 NA promoter-TSS (NM_172637) promoter-TSS (NM_172637) -297 NM_001163471 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain E3 ubiquitin protein ligase 2 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-11 chr5 146846210 146846642 + 0.301029995663976 NA intron (NM_026864, intron 3 of 3) intron (NM_026864, intron 3 of 3) 1355 NM_026864 68895 Mm.266978 NM_026864 ENSMUSG00000029641 Rasl11a 1110065D03Rik|AI852031 RAS-like, family 11, member A protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-13 chr7 73539235 73539464 + 0.301029995663976 NA TTS (NR_037569) TTS (NR_037569) 2397 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-8 chr15 37461738 37461925 + 0.301029995663976 NA intron (NM_001359841, intron 3 of 7) intron (NM_001359841, intron 3 of 7) -2449 NM_001170868 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-3 chr10 128094347 128094551 + 0.301029995663976 NA intron (NM_054078, intron 1 of 29) intron (NM_054078, intron 1 of 29) 1666 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-5 chr11 82019010 82019293 + 0.301029995663976 NA Intergenic Intergenic -16426 NM_011333 20296 Mm.290320 NM_011333 ENSMUSG00000035385 Ccl2 AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje chemokine (C-C motif) ligand 2 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-13 chr17 80801567 80801816 + 0.301029995663976 NA Intergenic Intergenic -73666 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-21 chr8 25620629 25621052 + 0.301029995663976 NA intron (NM_001001735, intron 1 of 9) intron (NM_001001735, intron 1 of 9) 18556 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Nsd3 6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1 nuclear receptor binding SET domain protein 3 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-12 chr18 82493869 82494111 + 0.301029995663976 NA intron (NM_001025245, intron 1 of 3) intron (NM_001025245, intron 1 of 3) 18867 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_77_64_-0.0230490159191303_6.01084330506889_0.301029995663976 chr11 69059726 69060412 + 0.301029995663976 NA exon (NM_028005, exon 1 of 1) exon (NM_028005, exon 1 of 1) 294 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-12 chr5 113901392 113901665 + 0.301029995663976 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 7178 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-3 chr15 82166294 82166752 + 0.301029995663976 NA intron (NM_033218, intron 1 of 18) intron (NM_033218, intron 1 of 18) 19254 NM_033218 20788 Mm.38016 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding unique_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976 chr7 110941950 110942448 + 0.301029995663976 NA intron (NM_194464, intron 2 of 20) intron (NM_194464, intron 2 of 20) 3988 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-14 chr2 35255724 35256186 + 0.301029995663976 NA promoter-TSS (NM_001206367) promoter-TSS (NM_001206367) -404 NM_001206367 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-11 chr5 115071904 115072131 + 0.301029995663976 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 35945 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt EyeLinc4|Gm13826 ribosomal protein L37, retrotransposed protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-3 chr10 70096773 70097056 + 0.301029995663976 NA promoter-TSS (NM_001111121) promoter-TSS (NM_001111121) -207 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak2_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-7 chr18 35770837 35771253 + 0.301029995663976 NA promoter-TSS (NM_019912) promoter-TSS (NM_019912) -514 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding unique_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-2 chr9 49532960 49533296 + 0.301029995663976 NA intron (NM_010875, intron 13 of 15) intron (NM_010875, intron 13 of 15) 14840 NR_029465 100036537 Mm.437541 NR_029465 ENSMUSG00000079564 Gm11149 - predicted gene 11149 ncRNA common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-22 chr8 61342479 61342800 + 0.301029995663976 NA intron (NM_021506, intron 4 of 11) intron (NM_021506, intron 4 of 11) -53767 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-9 chr4 62736918 62737293 + 0.301029995663976 NA Intergenic Intergenic 63131 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976 chr11 60140264 60140887 + 0.301029995663976 NA intron (NM_001037764, intron 1 of 4) intron (NM_001037764, intron 1 of 4) 493 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-16 chr3 145886242 145886520 + 0.301029995663976 NA intron (NM_026993, intron 4 of 5) intron (NM_026993, intron 4 of 5) -37881 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-2 chr10 7161655 7161970 + 0.301029995663976 NA intron (NM_172546, intron 1 of 12) intron (NM_172546, intron 1 of 12) 50425 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-18 chr6 67014995 67015218 + 0.301029995663976 NA intron (NM_001177560, intron 3 of 4) intron (NM_001177560, intron 3 of 4) -21493 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-9 chr19 12335637 12336063 + 0.301029995663976 NA intron (NR_030566, intron 3 of 3) intron (NR_030566, intron 3 of 3) -13025 NM_001011839 258117 Mm.432096 NM_001011839 ENSMUSG00000096436 Olfr1437 MOR214-6 olfactory receptor 1437 protein-coding common_peak2_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976 chr1 89457566 89457878 + 0.301029995663976 NA intron (NM_001037136, intron 1 of 16) intron (NM_001037136, intron 1 of 16) 2911 NM_001037136 347722 Mm.291135 NM_178119 ENSMUSG00000055013 Agap1 Centg2|Ggap1|R75364|mKIAA1099 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-2 chr1 165460690 165460944 + 0.301029995663976 NA promoter-TSS (NM_027430) promoter-TSS (NM_027430) -354 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-10 chr16 55524029 55524399 + 0.301029995663976 NA Intergenic Intergenic 29483 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976-5 chr3 155092720 155093244 + 0.301029995663976 NA promoter-TSS (NM_028938) promoter-TSS (NM_028938) 396 NM_029330 75540 Mm.35218 NM_029330 ENSMUSG00000053870 Fpgt 1700016E03Rik fucose-1-phosphate guanylyltransferase protein-coding common_peak1_23_20_-0.0814417763335111_4.35159653461201_0.301029995663976-19 chr7 139256702 139257290 + 0.301029995663976 NA intron (NM_001098636, intron 2 of 2) intron (NM_001098636, intron 2 of 2) 8514 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-5 chr12 80246453 80246842 + 0.301029995663976 NA intron (NM_134156, intron 1 of 20) intron (NM_134156, intron 1 of 20) 13724 NM_134156 109711 Mm.253564 NM_134156 ENSMUSG00000015143 Actn1 3110023F10Rik|Actn1a actinin, alpha 1 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-10 chr19 44294210 44294417 + 0.301029995663976 NA 5' UTR (NM_009128, exon 1 of 6) 5' UTR (NM_009128, exon 1 of 6) 637 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-9 chr17 29993851 29994137 + 0.301029995663976 NA Intergenic Intergenic -11045 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-2 chr11 55204483 55204748 + 0.301029995663976 NA intron (NM_153139, intron 1 of 10) intron (NM_153139, intron 1 of 10) 275 NM_153139 215335 Mm.35732 NM_153139 ENSMUSG00000020261 Slc36a1 5830411H19Rik|AI839897|Pat1 solute carrier family 36 (proton/amino acid symporter), member 1 protein-coding common_peak2_76_63_-0.0191655478288109_5.99041722608559_0.301029995663976 chr11 115535242 115536234 + 0.301029995663976 NA intron (NM_133354, intron 1 of 3) CpG 492 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-9 chr19 5913057 5913264 + 0.301029995663976 NA promoter-TSS (NM_001291078) promoter-TSS (NM_001291078) -289 NM_001291078 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-11 chr7 41393615 41393808 + 0.301029995663976 NA promoter-TSS (NM_183167) promoter-TSS (NM_183167) -332 NM_001199330 233168 Mm.379390 NM_183167 ENSMUSG00000056383 AI987944 - expressed sequence AI987944 protein-coding common_peak2_78_65_-0.026826453083177_6.03098089281687_0.301029995663976 chr11 117968005 117969008 + 0.301029995663976 NA intron (NM_007707, intron 1 of 1) CpG 860 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding unique_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-12 chr5 137012311 137012574 + 0.301029995663976 NA Intergenic Intergenic -17853 NM_001039385 381677 Mm.389697 NM_001039385 ENSMUSG00000037428 Vgf Gm1052 VGF nerve growth factor inducible protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-7 chr19 29470250 29470541 + 0.301029995663976 NA intron (NM_021396, intron 5 of 5) intron (NM_021396, intron 5 of 5) 51592 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-11 chr2 66256278 66256535 + 0.301029995663976 NA intron (NM_001047604, intron 1 of 28) CpG 211 NM_001047604 73668 Mm.250868 NM_001047604 ENSMUSG00000034848 Ttc21b 2410066K11Rik|Thm1|aln|mKIAA1992 tetratricopeptide repeat domain 21B protein-coding common_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-15 chr7 28801957 28802244 + 0.301029995663976 NA Intergenic Intergenic -8790 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak2_56_47_-0.0349634439485547_5.56748077874688_0.301029995663976 chr10 53597150 53597975 + 0.301029995663976 NA intron (NM_025541, intron 1 of 3) CpG 601 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding common_peak1_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-9 chr3 121696984 121697227 + 0.301029995663976 NA Intergenic Intergenic 26342 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding unique_peak1_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-6 chr15 98951223 98951688 + 0.301029995663976 NA intron (NM_011653, intron 2 of 3) intron (NM_011653, intron 2 of 3) 2046 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976 chr11 6625766 6625997 + 0.301029995663976 NA intron (NM_134011, intron 1 of 11) CpG 186 NM_001130457 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding unique_peak2_18_16_-0.111244407131947_4.03184063768437_0.301029995663976-3 chr12 104978739 104979148 + 0.301029995663976 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 19734 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 KASH3|nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_29_25_-0.0699071729419627_4.66548613167011_0.301029995663976-2 chr11 69100255 69100770 + 0.301029995663976 NA 5' UTR (NM_011065, exon 2 of 23) 5' UTR (NM_011065, exon 2 of 23) 360 NM_001159367 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding unique_peak2_12_11_-0.152369346692798_3.50877782737476_0.301029995663976-15 chr3 19895575 19895786 + 0.301029995663976 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 809 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-10 chr17 81580381 81580827 + 0.301029995663974 NA intron (NR_104580, intron 2 of 8) intron (NR_104580, intron 2 of 8) 157783 NM_001286684 20541 Mm.265834 NM_011406 ENSMUSG00000054640 Slc8a1 AI852629|AV344025|D930008O12Rik|Ncx1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-13 chr2 117679309 117679662 + 0.301029995663974 NA Intergenic Intergenic 133317 NR_126427 100504728 Mm.413174 NR_126427 Gm13985 - predicted gene 13985 ncRNA common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-5 chr11 94211531 94211927 + 0.301029995663974 NA 5' UTR (NM_009427, exon 1 of 2) 5' UTR (NM_009427, exon 1 of 2) 275 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-7 chr15 64377257 64377497 + 0.301029995663974 NA intron (NM_001276461, intron 1 of 28) intron (NM_001276461, intron 1 of 28) 5542 NM_001276461 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-12 chr2 117475647 117476079 + 0.301029995663974 NA Intergenic Intergenic -132986 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp|calDAG-GEFII RAS guanyl releasing protein 1 protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-3 chr1 162150267 162150828 + 0.301029995663974 NA intron (NM_001038619, intron 14 of 20) (GGA)n|Simple_repeat|Simple_repeat -67076 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-6 chr14 7826333 7826661 + 0.301029995663974 NA intron (NM_001081427, intron 1 of 45) intron (NM_001081427, intron 1 of 45) 8540 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-2 chr10 7258018 7258333 + 0.301029995663974 NA Intergenic Intergenic -45938 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-7 chr12 104898223 104898499 + 0.301029995663974 NA Intergenic Intergenic -33285 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-15 chr7 81523752 81524156 + 0.301029995663974 NA intron (NR_045299, intron 1 of 4) intron (NR_045299, intron 1 of 4) 404 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-18 chr5 53490302 53490604 + 0.301029995663974 NA Intergenic Intergenic -65326 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-11 chr8 128272582 128272848 + 0.301029995663974 NA Intergenic Intergenic 5510 NR_105822 102465212 NR_105822 ENSMUSG00000099326 Mir21c Gm28013|mmu-mir-21c microRNA 21c ncRNA common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-19 chr5 135794908 135795210 + 0.301029995663974 NA Intergenic Intergenic 16410 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-5 chr13 49294393 49294843 + 0.301029995663974 NA intron (NM_015759, intron 3 of 17) RSINE1|SINE|B4 14590 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-3 chr11 12535328 12535671 + 0.301029995663974 NA Intergenic Intergenic -70539 NM_001282993 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-21 chr7 112868534 112868869 + 0.301029995663974 NA intron (NM_001166584, intron 10 of 13) intron (NM_001166584, intron 10 of 13) -85261 NM_175279 78748 Mm.349943 NM_175279 ENSMUSG00000098132 Rassf10 4632411J06Rik Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-16 chr8 71542996 71543326 + 0.301029995663974 NA exon (NM_028617, exon 2 of 9) exon (NM_028617, exon 2 of 9) 231 NM_028617 73711 Mm.307770 NM_028617 ENSMUSG00000031813 Mvb12a 1110012M11Rik|Fam125a multivesicular body subunit 12A protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-10 chr17 47505228 47505620 + 0.301029995663974 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 373 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-17 chr8 94807969 94808188 + 0.301029995663974 NA Intergenic Intergenic -2375 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-10 chr7 19933513 19933880 + 0.301029995663974 NA Intergenic Intergenic -12553 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-16 chr4 57782252 57782525 + 0.301029995663974 NA intron (NM_001304544, intron 6 of 8) intron (NM_001304544, intron 6 of 8) -62860 NM_009649 11641 Mm.467752 NM_009649 ENSMUSG00000038729 Akap2 AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2 A kinase (PRKA) anchor protein 2 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-13 chr4 151862229 151862437 + 0.301029995663974 NA promoter-TSS (NM_001195565) promoter-TSS (NM_001195565) -565 NM_001195565 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-9 chr14 76877203 76877428 + 0.301029995663974 NA Intergenic Intergenic 117184 NR_153763 73883 Mm.489041 NR_153763 4930431P22Rik - RIKEN cDNA 4930431P22 gene ncRNA unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-9 chr5 135688392 135688833 + 0.301029995663974 NA promoter-TSS (NM_008898) promoter-TSS (NM_008898) -533 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974 chr1 134494105 134494511 + 0.301029995663974 NA promoter-TSS (NM_145510) promoter-TSS (NM_145510) -352 NM_145510 98710 Mm.198119 NM_145510 ENSMUSG00000042229 Rabif AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3 RAB interacting factor protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-5 chr12 110978604 110978957 + 0.301029995663974 NA promoter-TSS (NM_001361917) promoter-TSS (NM_001361917) -162 NM_001361917 74251 Mm.250989 NM_175207 ENSMUSG00000037904 Ankrd9 2500003O20Rik ankyrin repeat domain 9 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-9 chr15 80028736 80028941 + 0.301029995663974 NA Intergenic Intergenic -14030 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-6 chr12 100280471 100280865 + 0.301029995663974 NA intron (NR_045741, intron 1 of 3) B1_Mus1|SINE|Alu 4059 NR_045741 100038713 Mm.470751 NR_045741 ENSMUSG00000113679 Gm10432 - predicted gene 10432 ncRNA common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-11 chr2 59882229 59882551 + 0.301029995663974 NA intron (NM_001159636, intron 1 of 10) CpG 216 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974 chr1 184060914 184061138 + 0.301029995663974 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 26645 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding unique_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-5 chr6 97355560 97355842 + 0.301029995663974 NA intron (NM_145148, intron 6 of 23) intron (NM_145148, intron 6 of 23) -102921 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-14 chr6 39377322 39377574 + 0.301029995663974 NA promoter-TSS (NR_155076) promoter-TSS (NR_155076) -13 NR_155076 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974 chr1 10993501 10993898 + 0.301029995663974 NA 5' UTR (NM_029525, exon 1 of 40) 5' UTR (NM_029525, exon 1 of 40) 234 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-3 chr5 124112830 124113223 + 0.301029995663974 NA intron (NM_001361483, intron 2 of 5) intron (NM_001361483, intron 2 of 5) 705 NM_001347478 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-18 chr9 88037156 88037575 + 0.301029995663974 NA Intergenic Intergenic -290244 NM_011851 23959 Mm.244235 NM_011851 ENSMUSG00000032420 Nt5e 2210401F01Rik|5'-NT|AI447961|CD73|NT|Nt5|eNT 5' nucleotidase, ecto protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-17 chr4 128770280 128770650 + 0.301029995663974 NA Intergenic Intergenic 11207 NM_001009819 215493 Mm.300900 NM_001009819 ENSMUSG00000028794 A3galt2 Gm433|iGb3|iGb3S alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-11 chr19 3913151 3913370 + 0.301029995663974 NA promoter-TSS (NM_144870) promoter-TSS (NM_144870) -486 NM_001271444 225887 Mm.44227 NM_144870 ENSMUSG00000059734 Ndufs8 BC021616|CI-23kD|TYKY NADH dehydrogenase (ubiquinone) Fe-S protein 8 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-23 chr9 34986938 34987269 + 0.301029995663974 NA intron (NM_001190912, intron 3 of 15) intron (NM_001190912, intron 3 of 15) -129625 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-2 chr1 64945298 64945675 + 0.301029995663974 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 11338 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-14 chr2 150450915 150451422 + 0.301029995663974 NA intron (NM_001310645, intron 1 of 3) intron (NM_001310645, intron 1 of 3) 333 NM_001310645 668923 Mm.393876 NM_001177550 ENSMUSG00000068130 Zfp442 ZIPO-II zinc finger protein 442 protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-20 chr7 66378425 66378831 + 0.301029995663974 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 3096 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-4 chr11 4270123 4270487 + 0.301029995663974 NA 3' UTR (NM_008501, exon 4 of 4) 3' UTR (NM_008501, exon 4 of 4) 3509 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-7 chr14 16510202 16510454 + 0.301029995663974 NA intron (NM_001289760, intron 4 of 9) intron (NM_001289760, intron 4 of 9) 65148 NM_011243 218772 Mm.259318 NM_011243 ENSMUSG00000017491 Rarb A830025K23|Hap|Nr1b2 retinoic acid receptor, beta protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-3 chr11 76590461 76590764 + 0.301029995663974 NA Intergenic Intergenic -12873 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-4 chr11 72205913 72206337 + 0.301029995663974 NA intron (NR_155065, intron 1 of 19) intron (NR_155065, intron 1 of 19) 1357 NR_155065 74477 Mm.289697 NM_028963 ENSMUSG00000020807 4933427D14Rik C85113|Kiaa0753|MNR RIKEN cDNA 4933427D14 gene protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-15 chr4 12906907 12907138 + 0.301029995663974 NA intron (NM_001171801, intron 1 of 4) CpG 185 NM_001171801 208820 Mm.12057 NM_173746 ENSMUSG00000055963 Triqk C130086A10|Gm11818 triple QxxK/R motif containing protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-8 chr14 25842242 25842491 + 0.301029995663974 NA intron (NM_013469, intron 1 of 14) CpG 211 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-12 chr2 156421067 156421482 + 0.301029995663974 NA 5' UTR (NM_013510, exon 1 of 22) 5' UTR (NM_013510, exon 1 of 22) 365 NM_001291123 13821 Mm.20852 NM_013510 ENSMUSG00000027624 Epb41l1 4.1N|Epb4.1l1|NBL1|mKIAA0338 erythrocyte membrane protein band 4.1 like 1 protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-8 chr2 152785700 152786176 + 0.301029995663974 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 31765 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit 4I2 protein-coding unique_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-6 chr8 123982314 123982694 + 0.301029995663974 NA exon (NM_019552, exon 1 of 13) exon (NM_019552, exon 1 of 13) 618 NM_019552 56199 Mm.274243 NM_019552 ENSMUSG00000031974 Abcb10 Abc-me|Abcb12 ATP-binding cassette, sub-family B (MDR/TAP), member 10 protein-coding unique_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974 chr11 12358734 12359155 + 0.301029995663974 NA intron (NM_001282993, intron 5 of 13) intron (NM_001282993, intron 5 of 13) 53196 NM_001282994 12808 Mm.22847 NM_172496 ENSMUSG00000020173 Cobl - cordon-bleu WH2 repeat protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-4 chr12 79029315 79029728 + 0.301029995663974 NA intron (NM_181073, intron 1 of 28) CpG 358 NM_181073 211945 Mm.478321 NM_181073 ENSMUSG00000060716 Plekhh1 AV308913|C77772|D630024D12Rik|mKIAA1200 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 protein-coding common_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-8 chr15 8446167 8446408 + 0.301029995663974 NA Intergenic Intergenic -1824 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 NIPBL cohesin loading factor protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-2 chr10 71159939 71160194 + 0.301029995663974 NA promoter-TSS (NM_001347189) promoter-TSS (NM_001347189) -376 NM_001347189 83675 Mm.286834 NM_031397 ENSMUSG00000014329 Bicc1 Bic-C|bpk|jcpk BicC family RNA binding protein 1 protein-coding unique_peak1_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-6 chr15 6390453 6390861 + 0.301029995663974 NA intron (NM_001037905, intron 1 of 13) intron (NM_001037905, intron 1 of 13) 3909 NM_001310446 13132 Mm.240830 NM_023118 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled 2, mitogen-responsive phosphoprotein protein-coding unique_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-4 chr6 50356777 50357300 + 0.301029995663974 NA intron (NM_027881, intron 2 of 21) intron (NM_027881, intron 2 of 21) 25799 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-2 chr14 64368767 64369249 + 0.301029995663974 NA intron (NM_001253715, intron 1 of 4) intron (NM_001253715, intron 1 of 4) 47948 NM_001253716 110265 Mm.26713 NM_026322 ENSMUSG00000054733 Msra 2310045J23Rik|6530413P12Rik|MSR-A methionine sulfoxide reductase A protein-coding common_peak2_22_19_-0.0720198135178638_4.28591818812843_0.301029995663974-22 chr8 34475377 34475662 + 0.301029995663974 NA Intergenic Intergenic 164797 NR_040706 330734 Mm.149998 NR_040706 ENSMUSG00000109819 B930018H19Rik B930018H19 RIKEN cDNA B930018H19 gene ncRNA common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-5 chr1 88878274 88878748 + 0.301029995663973 NA Intergenic Intergenic 123621 NR_040493 78650 Mm.243767 NR_040493 ENSMUSG00000097398 Platr5 2410088K16Rik pluripotency associated transcript 5 ncRNA common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-7 chr16 91556365 91556772 + 0.301029995663973 NA intron (NM_008338, intron 2 of 6) intron (NM_008338, intron 2 of 6) 9474 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-6 chr2 35269989 35270512 + 0.301029995663973 NA intron (NM_001206367, intron 2 of 17) ID4|SINE|ID 3506 NM_001206369 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973 chr1 87853370 87853808 + 0.301029995663973 NA non-coding (NR_136921, exon 2 of 2) non-coding (NR_136921, exon 2 of 2) 302 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-9 chr7 100985055 100985482 + 0.301029995663973 NA Intergenic Intergenic -20902 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak2_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-3 chrX 152731961 152732882 + 0.301029995663973 NA intron (NM_172441, intron 1 of 9) intron (NM_172441, intron 1 of 9) 37065 NM_001290684 110380 Mm.40796 NM_172441 ENSMUSG00000045180 Shroom2 4832440C16|Apxl|C630003H05Rik|Shrm2 shroom family member 2 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-16 chr8 31378931 31379395 + 0.301029995663973 NA intron (NR_046272, intron 2 of 3) intron (NR_046272, intron 2 of 3) 11414 NR_046272 74517 Mm.390001 NR_046272 ENSMUSG00000109915 7420700N18Rik - RIKEN cDNA 7420700N18 gene ncRNA common_peak2_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-4 chr7 111976831 111977362 + 0.301029995663973 NA Intergenic Intergenic -46410 NM_133758 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973 chr11 102818530 102819154 + 0.301029995663973 NA intron (NM_001159383, intron 1 of 2) CpG 317 NM_001159382 14615 Mm.390369 NM_008122 ENSMUSG00000034520 Gjc1 C130009G16Rik|Cnx45|Cx45|Gja-7|Gja7 gap junction protein, gamma 1 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973 chr1 74275500 74276239 + 0.301029995663973 NA Intergenic Intergenic -2731 NM_174985 227289 Mm.246587 NM_174985 ENSMUSG00000064272 Gpbar1 BG37|GPCR|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-3 chr16 57367512 57368020 + 0.301029995663973 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) 14489 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-3 chr4 88776238 88776637 + 0.301029995663973 NA promoter-TSS (NM_001243155).2 promoter-TSS (NM_001243155).2 -325 NM_001243165 545647 Mm.380019 NM_001243165 ENSMUSG00000096582 Gm13289 - predicted gene 13289 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-9 chr8 106683216 106683606 + 0.301029995663973 NA intron (NM_173037, intron 1 of 17) CpG 343 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-3 chr1 79470284 79470852 + 0.301029995663973 NA Intergenic Intergenic -30478 NM_001310680 20254 Mm.5038 NM_009129 ENSMUSG00000050711 Scg2 Chgc|SgII secretogranin II protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973 chr1 38987129 38987484 + 0.301029995663973 NA promoter-TSS (NM_026850) promoter-TSS (NM_026850) -508 NM_026850 68833 Mm.28121 NM_026850 ENSMUSG00000026078 Pdcl3 1110061A19Rik|C80025|Viaf1 phosducin-like 3 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-2 chr13 115089755 115090159 + 0.301029995663973 NA 5' UTR (NM_134058, exon 1 of 2) 5' UTR (NM_134058, exon 1 of 2) 201 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota mRNA surveillance and ribosome rescue factor protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-8 chr6 120470047 120470458 + 0.301029995663973 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 7055 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak2_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-2 chr17 70728448 70728814 + 0.301029995663973 NA intron (NM_001347411, intron 9 of 14) intron (NM_001347411, intron 9 of 14) 118146 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-4 chr19 16286187 16286734 + 0.301029995663973 NA intron (NM_008139, intron 2 of 6) intron (NM_008139, intron 2 of 6) 28544 NR_105832 102465218 NR_105832 ENSMUSG00000098718 Mir496b Gm28028|mmu-mir-496b microRNA 496b ncRNA common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-10 chr9 65435892 65436449 + 0.301029995663973 NA intron (NM_027134, intron 1 of 8) intron (NM_027134, intron 1 of 8) 388 NM_027134 69606 Mm.287956 NM_027134 ENSMUSG00000059183 Mtfmt 2310020P08Rik mitochondrial methionyl-tRNA formyltransferase protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-7 chr2 152607070 152607568 + 0.301029995663973 NA intron (NM_001037247, intron 1 of 1) URR1A|DNA|hAT-Charlie 2992 NM_001037247 266620 Mm.330669 NM_001037247 ENSMUSG00000044863 Defb36 BD-36|Defb123|mBD-36 defensin beta 36 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-14 chr7 19377775 19378308 + 0.301029995663973 NA 3' UTR (NM_001010836, exon 13 of 13) 3' UTR (NM_001010836, exon 13 of 13) -3998 NM_007949 13871 Mm.36524 NM_007949 ENSMUSG00000030400 Ercc2 AA407812|AU020867|AW240756|CXPD|Ercc-2|Mhdarco15|RCO015|XPD excision repair cross-complementing rodent repair deficiency, complementation group 2 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-11 chr9 99436689 99437170 + 0.301029995663973 NA promoter-TSS (NM_008624) promoter-TSS (NM_008624) -217 NM_008624 17532 Mm.2045 NM_008624 ENSMUSG00000032470 Mras 2900078C09Rik|AI326250 muscle and microspikes RAS protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-8 chr2 121449442 121449682 + 0.301029995663973 NA intron (NM_001290837, intron 1 of 2) CpG 364 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-11 chr4 98382959 98383318 + 0.301029995663973 NA exon (NM_053157, exon 1 of 7) exon (NM_053157, exon 1 of 7) 127 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding unique_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973 chr5 135029029 135029650 + 0.301029995663973 NA intron (NM_001359179, intron 1 of 8) intron (NM_001359179, intron 1 of 8) 5857 NR_133683 20907 Mm.6225 NM_016801 ENSMUSG00000007207 Stx1a HPC-1 syntaxin 1A (brain) protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-15 chr7 100985050 100985469 + 0.301029995663973 NA Intergenic Intergenic -20893 NM_183168 233571 Mm.235193 NM_183168 ENSMUSG00000048779 P2ry6 2010204J23Rik|P2Y6 pyrimidinergic receptor P2Y, G-protein coupled, 6 protein-coding common_peak2_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973 chr15 34412159 34412546 + 0.301029995663973 NA intron (NM_001358780, intron 10 of 18) intron (NM_001358780, intron 10 of 18) 30873 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-5 chr17 47687722 47687988 + 0.301029995663973 NA TTS (NM_001290337) TTS (NM_001290337) 245 NR_045945 100415787 Mm.392206 NR_045945 ENSMUSG00000084880 Tomm6os Gm14872|Prickle4os translocase of outer mitochondrial membrane 6, opposite strand ncRNA common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-7 chr6 100287710 100288196 + 0.301029995663973 NA promoter-TSS (NM_019743) promoter-TSS (NM_019743) -595 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-12 chr5 114369840 114370487 + 0.301029995663973 NA exon (NM_026145, exon 3 of 7) exon (NM_026145, exon 3 of 7) 10342 NM_001159941 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-4 chr16 91556364 91556797 + 0.301029995663973 NA intron (NM_008338, intron 2 of 6) intron (NM_008338, intron 2 of 6) 9486 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-4 chr2 167830668 167831252 + 0.301029995663973 NA Intergenic Intergenic -101367 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-2 chr1 168431339 168431976 + 0.301029995663973 NA 5' UTR (NM_001291509, exon 1 of 7) 5' UTR (NM_001291509, exon 1 of 7) 512 NM_001291509 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding common_peak2_43_36_-0.0302779630318897_5.194314384113_0.301029995663973 chr2 118000185 118001071 + 0.301029995663973 NA intron (NR_126479, intron 8 of 9) intron (NR_126479, intron 8 of 9) 110574 NR_126479 329496 Mm.235844 NR_126479 ENSMUSG00000087203 Gm13986 C230060E24 predicted gene 13986 ncRNA common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-8 chr7 84338812 84339485 + 0.301029995663973 NA intron (NM_007488, intron 5 of 18) Tigger17c|DNA|TcMar-Tigger 70890 NM_007488 11864 Mm.38594 NM_007488 ENSMUSG00000015709 Arnt2 Hif-2b|bHLHe1|mKIAA0307 aryl hydrocarbon receptor nuclear translocator 2 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-11 chr9 70229490 70229946 + 0.301029995663973 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 22368 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-5 chr2 30707456 30707755 + 0.301029995663973 NA Intergenic MIR|SINE|MIR -13605 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-6 chr1 171113582 171113909 + 0.301029995663973 NA Intergenic Intergenic -7916 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-4 chr1 87901321 87901763 + 0.301029995663973 NA intron (NM_177646, intron 3 of 29) intron (NM_177646, intron 3 of 29) -47243 NR_136921 100503175 Mm.426422 NR_136921 ENSMUSG00000101942 Gm19582 - predicted gene, 19582 ncRNA common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-5 chr4 88802637 88802960 + 0.301029995663973 NA promoter-TSS (NM_001161609).9 promoter-TSS (NM_001161609).9 -456 NM_001161609 545654 Mm.478784 NM_001161609 ENSMUSG00000095101 Gm13285 limitin predicted gene 13285 protein-coding unique_peak2_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973 chr9 111474505 111474951 + 0.301029995663973 NA intron (NM_172928, intron 2 of 4) intron (NM_172928, intron 2 of 4) 35647 NM_172928 245038 Mm.26361 NM_172928 ENSMUSG00000032500 Dclk3 BC056929|C730036H08|Dcamkl3 doublecortin-like kinase 3 protein-coding common_peak2_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-2 chr4 150707515 150707828 + 0.301029995663973 NA Intergenic Intergenic -55497 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-8 chr3 132867505 132868010 + 0.301029995663973 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 10839 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-10 chr8 90877449 90877738 + 0.301029995663973 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 48758 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-2 chr15 80849661 80850023 + 0.301029995663973 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 51232 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-13 chr5 114648957 114649359 + 0.301029995663973 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 9263 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-9 chr2 129129855 129130499 + 0.301029995663973 NA intron (NM_025395, intron 1 of 3) intron (NM_025395, intron 1 of 3) 477 NM_025395 66170 Mm.40621 NM_025395 ENSMUSG00000037938 Chchd5 1110027L01Rik|AW045710 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-17 chr9 72076648 72077183 + 0.301029995663973 NA intron (NM_011544, intron 3 of 20) intron (NM_011544, intron 3 of 20) 34286 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-10 chr2 173218568 173219195 + 0.301029995663973 NA promoter-TSS (NM_021394) promoter-TSS (NM_021394) 41 NM_021394 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding common_peak1_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-2 chr1 58391817 58392198 + 0.301029995663973 NA Intergenic Intergenic -1129 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-6 chr19 9106442 9106885 + 0.301029995663973 NA Intergenic Intergenic -18707 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-6 chr5 100416405 100416853 + 0.301029995663973 NA promoter-TSS (NM_026969) promoter-TSS (NM_026969) -395 NM_001359332 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak2_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-5 chr8 106683153 106683484 + 0.301029995663973 NA intron (NM_173037, intron 1 of 17) CpG 250 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding common_peak2_37_31_-0.0308365454548527_4.98458172727257_0.301029995663973-7 chr5 64849661 64849941 + 0.301029995663973 NA Intergenic Intergenic 46278 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_36_31_-0.0690392589425581_4.96548037052872_0.301029995663973-3 chr19 11819135 11819714 + 0.301029995663973 NA promoter-TSS (NM_152220) promoter-TSS (NM_152220) -21 NR_153434 20908 Mm.272264 NM_011502 ENSMUSG00000041488 Stx3 Syn-3 syntaxin 3 protein-coding common_peak1_43_36_-0.0302779630318897_5.194314384113_0.301029995663973-3 chr16 37940543 37940946 + 0.301029995663973 NA intron (NM_153394, intron 1 of 9) intron (NM_153394, intron 1 of 9) 24248 NM_153394 239845 Mm.228018 NM_153394 ENSMUSG00000046961 Gpr156 Gababl G protein-coupled receptor 156 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-6 chr12 98734931 98735361 + 0.301029995663971 NA promoter-TSS (NM_011877) promoter-TSS (NM_011877) -501 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding unique_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-3 chr7 19131835 19132175 + 0.301029995663971 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 12146 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding unique_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-3 chr3 159193731 159194383 + 0.301029995663971 NA intron (NR_040750, intron 3 of 4) intron (NR_040750, intron 3 of 4) 117693 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-2 chr15 31245568 31245969 + 0.301029995663971 NA intron (NM_146057, intron 2 of 3) intron (NM_146057, intron 2 of 3) 21383 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-16 chr7 110796874 110797153 + 0.301029995663971 NA intron (NM_009667, intron 6 of 14) intron (NM_009667, intron 6 of 14) 24409 NM_009667 11717 Mm.3238 NM_009667 ENSMUSG00000005686 Ampd3 - adenosine monophosphate deaminase 3 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-21 chr9 110679891 110680371 + 0.301029995663971 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 23628 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-14 chr7 38230003 38230339 + 0.301029995663971 NA Intergenic Intergenic -2177 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-5 chr2 26903208 26903620 + 0.301029995663971 NA promoter-TSS (NM_009298) promoter-TSS (NM_009298) -527 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-15 chr7 3292212 3292519 + 0.301029995663971 NA promoter-TSS (NM_001093766) promoter-TSS (NM_001093766) -663 NM_001093766 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding unique_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-2 chr6 120147332 120147705 + 0.301029995663971 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) -46305 NM_001347432 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-3 chr15 31453312 31453627 + 0.301029995663971 NA exon (NM_145852, exon 1 of 5) exon (NM_145852, exon 1 of 5) 220 NM_145852 252967 Mm.436668 NM_145852 ENSMUSG00000022236 Ropn1l ASP|AV047578|Akapasp ropporin 1-like protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-10 chr8 46151726 46152015 + 0.301029995663971 NA Intergenic CpG -11781 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430 cilia and flagella associated protein 97 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-13 chr5 114942292 114942687 + 0.301029995663971 NA intron (NM_028211, intron 1 of 5) intron (NM_028211, intron 1 of 5) 287 NM_028211 72357 Mm.292672 NM_028211 ENSMUSG00000029559 2210016L21Rik - RIKEN cDNA 2210016L21 gene protein-coding unique_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-4 chr7 66689963 66690210 + 0.301029995663971 NA promoter-TSS (NR_003961) promoter-TSS (NR_003961) 197 NR_034030 72635 Mm.289796 NM_152815 ENSMUSG00000053091 Lins1 2700083B01Rik|AW547219|Lins|Lins2|Wins2 lines homolog 1 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-4 chr18 39736999 39737599 + 0.301029995663971 NA Intergenic Intergenic -36198 NM_011033 18459 Mm.9493 NM_011033 ENSMUSG00000051732 Pabpc2 Pabp|Pabp+|Pabp2 poly(A) binding protein, cytoplasmic 2 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-5 chr12 73383455 73383849 + 0.301029995663971 NA intron (NR_046013, intron 2 of 3) intron (NR_046013, intron 2 of 3) 25911 NR_046013 380765 Mm.490476 NR_046013 ENSMUSG00000056359 D830013O20Rik Gm891 RIKEN cDNA D830013O20 gene ncRNA common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-14 chr6 146958191 146958456 + 0.301029995663971 NA intron (NM_001355729, intron 3 of 27) intron (NM_001355729, intron 3 of 27) -3902 NM_001164236 73344 Mm.391543 NM_028509 ENSMUSG00000040163 1700034J05Rik - RIKEN cDNA 1700034J05 gene protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-7 chr6 22355746 22356084 + 0.301029995663971 NA intron (NM_138587, intron 1 of 9) CpG 166 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-18 chr8 22060815 22061227 + 0.301029995663971 NA promoter-TSS (NM_007511) promoter-TSS (NM_007511) 300 NM_183142 207958 Mm.267439 NM_183142 ENSMUSG00000063362 Alg11 AI849156|AW492253|B230397C21|Mmat-4(5) asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-4 chr18 55196342 55196656 + 0.301029995663971 NA Intergenic Intergenic -203908 NM_001360787 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-6 chr12 104899674 104900081 + 0.301029995663971 NA Intergenic Intergenic -34801 NR_104435 94040 Mm.244078 NM_053155 ENSMUSG00000021097 Clmn 9330188N17Rik|AI428889|AI788815|mKIAA1188 calmin protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-10 chr4 40238685 40239000 + 0.301029995663971 NA intron (NM_172689, intron 1 of 17) intron (NM_172689, intron 1 of 17) 983 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-9 chr17 26973378 26973664 + 0.301029995663971 NA intron (NM_001005916, intron 1 of 1) intron (NM_001005916, intron 1 of 1) 342 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971 chr1 64944755 64945118 + 0.301029995663971 NA intron (NM_001039493, intron 1 of 7) ID4_|SINE|ID 11888 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-13 chr6 125215641 125216034 + 0.301029995663971 NA intron (NM_001080557, intron 1 of 3) CpG 256 NM_009496 22317 Mm.32321 NM_009496 ENSMUSG00000030337 Vamp1 Syb-1|Syb1|VAMP-1|lew vesicle-associated membrane protein 1 protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-3 chr18 4514852 4515219 + 0.301029995663971 NA Intergenic Intergenic -119894 NM_001081963 240185 Mm.33179 NM_001081963 ENSMUSG00000033960 Jcad 1110056P05Rik|9430020K01Rik|Gm328|mKIAA1462 junctional cadherin 5 associated protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-16 chr8 22135321 22135635 + 0.301029995663971 NA intron (NM_011848, intron 11 of 15) intron (NM_011848, intron 11 of 15) -10411 NM_001347318 330721 Mm.113940 NM_177898 ENSMUSG00000037738 Nek5 6530411J22|BB049667 NIMA (never in mitosis gene a)-related expressed kinase 5 protein-coding unique_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971 chr13 23551262 23551672 + 0.301029995663971 NA exon (NM_175655, exon 1 of 1) exon (NM_175655, exon 1 of 1) 176 NM_175655 319157 Mm.442307 NM_175655 ENSMUSG00000069274 Hist1h4f - histone cluster 1, H4f protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-5 chr18 73815742 73816167 + 0.301029995663971 NA promoter-TSS (NM_145494) promoter-TSS (NM_145494) -562 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding unique_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-4 chr9 46175653 46175997 + 0.301029995663971 NA intron (NM_027498, intron 4 of 24) intron (NM_027498, intron 4 of 24) -52805 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-5 chr11 110337133 110337627 + 0.301029995663971 NA intron (NM_147219, intron 1 of 38) CpG 336 NM_147219 217265 Mm.41942 NM_147219 ENSMUSG00000018800 Abca5 ABC13|B930033A02Rik|mKIAA1888 ATP-binding cassette, sub-family A (ABC1), member 5 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-12 chr6 31105108 31105502 + 0.301029995663971 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -42212 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-10 chr7 141370239 141370521 + 0.301029995663971 NA Intergenic Intergenic -5270 NR_033532 320871 Mm.475463 NM_177280 ENSMUSG00000086844 B230206H07Rik - RIKEN cDNA B230206H07 gene ncRNA common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-4 chr11 77771997 77772416 + 0.301029995663971 NA Intergenic Intergenic -5029 NM_001291213 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971 chr12 86086219 86086743 + 0.301029995663971 NA intron (NM_029601, intron 2 of 7) intron (NM_029601, intron 2 of 7) 3920 NM_001199843 76411 Mm.292345 NM_029601 ENSMUSG00000007867 Ift43 1700019E19Rik|R75064 intraflagellar transport 43 protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971 chr12 87147753 87148105 + 0.301029995663971 NA promoter-TSS (NM_153415) promoter-TSS (NM_153415) -27 NM_153415 217734 Mm.388249 NM_153415 ENSMUSG00000034126 Pomt2 - protein-O-mannosyltransferase 2 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971 chr1 83090656 83091070 + 0.301029995663971 NA Intergenic Intergenic -25903 NM_016960 20297 Mm.116739 NM_016960 ENSMUSG00000026166 Ccl20 CKb4|LARC|MIP-3A|MIP-3[a]|MIP3A|ST38|Scya20|exodus-1 chemokine (C-C motif) ligand 20 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-19 chrX 95165991 95166395 + 0.301029995663971 NA 5' UTR (NM_001290385, exon 1 of 10) 5' UTR (NM_001290385, exon 1 of 10) 346 NM_001290385 236915 Mm.44841 NM_001033329 ENSMUSG00000025656 Arhgef9 9630036L12Rik CDC42 guanine nucleotide exchange factor (GEF) 9 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-9 chr7 130288825 130289117 + 0.301029995663971 NA Intergenic Intergenic -22163 NM_201601 14183 Mm.16340 NM_010207 ENSMUSG00000030849 Fgfr2 AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs fibroblast growth factor receptor 2 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-8 chr15 83100376 83100643 + 0.301029995663971 NA intron (NM_023475, intron 1 of 11) intron (NM_023475, intron 1 of 11) 304 NM_023475 68607 Mm.30056 NM_023475 ENSMUSG00000058586 Serhl 0610008B10Rik|1110019M09Rik|AU019786 serine hydrolase-like protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-11 chr4 149773817 149774171 + 0.301029995663971 NA intron (NM_027460, intron 1 of 6) CpG 273 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding unique_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-2 chr19 34706013 34706317 + 0.301029995663971 NA intron (NM_172838, intron 1 of 6) intron (NM_172838, intron 1 of 6) 40946 NM_172838 240638 Mm.74636 NM_172838 ENSMUSG00000009378 Slc16a12 3230401A21|AW210596 solute carrier family 16 (monocarboxylic acid transporters), member 12 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-3 chr11 69685875 69686213 + 0.301029995663971 NA promoter-TSS (NM_023517) promoter-TSS (NM_023517) -490 NM_023517 69583 Mm.8983 NM_023517 ENSMUSG00000089669 Tnfsf13 2310026N09Rik|April|Tall2|Tnlg7b|Trdl1 tumor necrosis factor (ligand) superfamily, member 13 protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-6 chr19 3913129 3913401 + 0.301029995663971 NA promoter-TSS (NM_144870) promoter-TSS (NM_144870) -491 NM_001271444 225887 Mm.44227 NM_144870 ENSMUSG00000059734 Ndufs8 BC021616|CI-23kD|TYKY NADH dehydrogenase (ubiquinone) Fe-S protein 8 protein-coding unique_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-4 chr8 67728730 67729207 + 0.301029995663971 NA intron (NM_177698, intron 11 of 14) intron (NM_177698, intron 11 of 14) 89327 NM_027626 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D pleckstrin and Sec7 domain containing 3 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-8 chr7 49252521 49252956 + 0.301029995663971 NA intron (NM_175272, intron 1 of 37) intron (NM_175272, intron 1 of 37) 6549 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-8 chr19 60889870 60890136 + 0.301029995663971 NA 5' UTR (NM_018869, exon 1 of 16) 5' UTR (NM_018869, exon 1 of 16) 254 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-20 chr9 67108104 67108556 + 0.301029995663971 NA non-coding (NR_153957, exon 3 of 3) non-coding (NR_153957, exon 3 of 3) 6030 NR_153957 102632690 Mm.387246 NR_153957 Gm10646 - predicted gene 10646 ncRNA common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-11 chr8 92820057 92820604 + 0.301029995663971 NA Intergenic Intergenic -6967 NM_008610 17390 Mm.29564 NM_008610 ENSMUSG00000031740 Mmp2 Clg4a|GelA|MMP-2 matrix metallopeptidase 2 protein-coding unique_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971 chr18 75214765 75215151 + 0.301029995663971 NA intron (NM_027727, intron 14 of 16) intron (NM_027727, intron 14 of 16) 82359 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-7 chr19 16016528 16016805 + 0.301029995663971 NA Intergenic Intergenic 31591 NR_045355 100502653 Mm.149980 NR_045355 ENSMUSG00000097557 C130060C02Rik - RIKEN cDNA C130060C02 gene ncRNA unique_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-3 chr5 62765666 62766071 + 0.301029995663971 NA intron (NM_178407, intron 1 of 32) CpG 309 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-2 chr1 138537468 138537917 + 0.301029995663971 NA intron (NM_021605, intron 3 of 9) intron (NM_021605, intron 3 of 9) 82065 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-7 chr15 52923101 52923461 + 0.301029995663971 NA Intergenic Intergenic 210836 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-17 chr8 34063335 34063653 + 0.301029995663971 NA Intergenic Intergenic 44320 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-4 chr10 12804140 12804581 + 0.301029995663971 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 57375 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-12 chr5 88675792 88676007 + 0.301029995663971 NA promoter-TSS (NM_001098476) promoter-TSS (NM_001098476) 272 NM_178700 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-8 chr16 30514128 30514637 + 0.301029995663971 NA 3' UTR (NM_172614, exon 10 of 10) 3' UTR (NM_172614, exon 10 of 10) 36196 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-2 chr13 51972397 51972707 + 0.301029995663971 NA Intergenic Intergenic -124189 NR_045061 74050 Mm.84860 NR_045061 ENSMUSG00000113211 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-2 chr4 150861096 150861450 + 0.301029995663971 NA intron (NM_133753, intron 1 of 3) intron (NM_133753, intron 1 of 3) 6203 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971 chr1 82283497 82283815 + 0.301029995663971 NA intron (NM_010570, intron 1 of 1) intron (NM_010570, intron 1 of 1) 7783 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-7 chr13 42575646 42576036 + 0.301029995663971 NA Intergenic Intergenic -104958 NM_001302635 218194 Mm.160124 NM_198419 ENSMUSG00000054728 Phactr1 9630030F18Rik|Rpel1 phosphatase and actin regulator 1 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-18 chr9 7501472 7502044 + 0.301029995663971 NA promoter-TSS (NM_019471) promoter-TSS (NM_019471) -584 NM_019471 17384 Mm.14126 NM_019471 ENSMUSG00000047562 Mmp10 AV377895|MMP-10|SL-2 matrix metallopeptidase 10 protein-coding common_peak1_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-6 chr3 51483517 51483835 + 0.301029995663971 NA promoter-TSS (NM_016858) promoter-TSS (NM_016858) -290 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-11 chr3 52070254 52070639 + 0.301029995663971 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 34560 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like transcriptional coactivator 3 protein-coding unique_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971 chr4 65288840 65289213 + 0.301029995663971 NA intron (NM_021362, intron 10 of 21) intron (NM_021362, intron 10 of 21) 164852 NM_021362 18491 Mm.317854 NM_021362 ENSMUSG00000028370 Pappa 8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A pregnancy-associated plasma protein A protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-3 chr10 7118816 7119059 + 0.301029995663971 NA TTS (NM_172546) TTS (NM_172546) 93300 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-17 chr7 112225301 112225618 + 0.301029995663971 NA promoter-TSS (NM_177282) promoter-TSS (NM_177282) -377 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-19 chr8 121897447 121897715 + 0.301029995663971 NA intron (NM_011404, intron 1 of 9) intron (NM_011404, intron 1 of 9) 10105 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-15 chr8 3467343 3467598 + 0.301029995663971 NA intron (NM_026951, intron 1 of 4) intron (NM_026951, intron 1 of 4) 178 NM_026951 69129 Mm.45279 NM_026951 ENSMUSG00000069633 Pex11g 1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma peroxisomal biogenesis factor 11 gamma protein-coding common_peak2_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-9 chr5 89470174 89470600 + 0.301029995663971 NA Intergenic Intergenic -12489 NM_008096 14473 Mm.196595 NM_008096 ENSMUSG00000035540 Gc DBP|VDB vitamin D binding protein protein-coding common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-9 chr18 65738079 65738444 + 0.301029995663971 NA intron (NM_177028, intron 9 of 14) intron (NM_177028, intron 9 of 14) 39993 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak1_24_21_-0.0900777769117456_4.41439273018142_0.301029995663971-10 chr3 32333902 32334265 + 0.301029995663971 NA TTS (NM_009517) TTS (NM_009517) -31406 NR_027966 67576 Mm.435324 NR_027966 4930429B21Rik - RIKEN cDNA 4930429B21 gene ncRNA common_peak2_25_21_-0.0338934441821843_4.4424848965462_0.301029995663971-2 chr1 192092060 192092469 + 0.301029995663971 NA 5' UTR (NM_011633, exon 1 of 10) 5' UTR (NM_011633, exon 1 of 10) 335 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding unique_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397 chr13 42051007 42051445 + 0.30102999566397 NA promoter-TSS (NM_007772) promoter-TSS (NM_007772) -795 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-11 chr5 31628323 31628570 + 0.30102999566397 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 14495 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-9 chr19 47331005 47331381 + 0.30102999566397 NA intron (NM_008018, intron 6 of 14) intron (NM_008018, intron 6 of 14) -57604 NR_105961 102466782 NR_105961 ENSMUSG00000098786 Mir6995 Gm27576|mmu-mir-6995 microRNA 6995 ncRNA common_peak1_116_96_-0.0197584428503497_6.59003362076195_0.30102999566397 chr5 139791597 139792614 + 0.30102999566397 NA intron (NM_010757, intron 1 of 2) CpG 569 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak2_65_54_-0.0213487087001454_5.77068535917459_0.30102999566397 chr14 55671527 55672146 + 0.30102999566397 NA promoter-TSS (NM_177992) promoter-TSS (NM_177992) 70 NM_008683 18002 Mm.296566 NM_008683 ENSMUSG00000010376 Nedd8 Rub1 neural precursor cell expressed, developmentally down-regulated gene 8 protein-coding common_peak1_117_96_-0.00756673643769279_6.59612947396828_0.30102999566397-2 chr4 98395546 98396994 + 0.30102999566397 NA intron (NM_001005784, intron 1 of 19) intron (NM_001005784, intron 1 of 19) 444 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-8 chr19 9072752 9073038 + 0.30102999566397 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 15061 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_118_97_-0.0102749167778704_6.60957238572627_0.30102999566397-2 chr7 128530857 128532050 + 0.30102999566397 NA intron (NM_013863, intron 1 of 3) intron (NM_013863, intron 1 of 3) 7870 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-2 chr10 11343394 11343669 + 0.30102999566397 NA promoter-TSS (NM_010146) promoter-TSS (NM_010146) 86 NM_010146 13853 Mm.89946 NM_010146 ENSMUSG00000055493 Epm2a TG-B|Tg(TcraK,TcrbK)TG-BFlv epilepsy, progressive myoclonic epilepsy, type 2 gene alpha protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-10 chr2 31768843 31769420 + 0.30102999566397 NA intron (NM_001283045, intron 1 of 10) intron (NM_001283045, intron 1 of 10) 8958 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-5 chr13 64369840 64370142 + 0.30102999566397 NA intron (NM_009984, intron 1 of 7) CpG 529 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak1_156_128_-0.00980994439884775_7.00632228322383_0.30102999566397 chr4 136310349 136312079 + 0.30102999566397 NA promoter-TSS (NM_001355182) promoter-TSS (NM_001355182) 272 NM_001277123 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding unique_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397 chr8 84663314 84663740 + 0.30102999566397 NA promoter-TSS (NM_010499) promoter-TSS (NM_010499) -675 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-2 chr19 37821502 37821720 + 0.30102999566397 NA Intergenic Intergenic 123803 NM_007811 13082 Mm.42230 NM_007811 ENSMUSG00000024987 Cyp26a1 Cyp26|P450RA|P450RAI|RAH cytochrome P450, family 26, subfamily a, polypeptide 1 protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-6 chr15 38999845 39000111 + 0.30102999566397 NA Intergenic Intergenic -6302 NM_001162494 14368 Mm.4769 NM_008056 ENSMUSG00000022297 Fzd6 Fz6 frizzled class receptor 6 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-3 chr11 4268142 4268590 + 0.30102999566397 NA intron (NM_001039537, intron 2 of 2) intron (NM_001039537, intron 2 of 2) 1570 NM_001039537 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_79_66_-0.030502206632586_6.05083808714148_0.30102999566397-2 chr19 5117778 5118624 + 0.30102999566397 NA non-coding (NR_045528, exon 1 of 16) non-coding (NR_045528, exon 1 of 16) 207 NR_045528 16594 Mm.271648 NM_008451 ENSMUSG00000024862 Klc2 8030455F02Rik|AW212649|KLC 2|KLC-2 kinesin light chain 2 protein-coding common_peak2_118_97_-0.0102749167778704_6.60957238572627_0.30102999566397 chr5 107900596 107901459 + 0.30102999566397 NA intron (NM_016980, intron 1 of 7) intron (NM_016980, intron 1 of 7) 499 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-17 chr9 56951076 56951440 + 0.30102999566397 NA intron (NM_178374, intron 1 of 8) intron (NM_178374, intron 1 of 8) 334 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding common_peak1_79_66_-0.030502206632586_6.05083808714148_0.30102999566397-2 chrX 42149492 42150315 + 0.30102999566397 NA promoter-TSS (NM_021465) promoter-TSS (NM_021465) 228 NM_001358225 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak2_65_54_-0.0213487087001454_5.77068535917459_0.30102999566397-4 chr19 36348641 36349248 + 0.30102999566397 NA Intergenic CpG -30123 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-10 chr18 8125976 8126430 + 0.30102999566397 NA Intergenic Intergenic 256490 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-4 chr11 96281304 96281847 + 0.30102999566397 NA promoter-TSS (NM_010461) promoter-TSS (NM_010461) -330 NM_010461 15416 Mm.4822 NM_010461 ENSMUSG00000056648 Hoxb8 Hox-2.4 homeobox B8 protein-coding common_peak1_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397-4 chr8 122443758 122444382 + 0.30102999566397 NA promoter-TSS (NM_138656) promoter-TSS (NM_138656) 414 NR_045696 100689703 Mm.271989 NR_045696 9330133O14Rik - RIKEN cDNA 9330133O14 gene ncRNA common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-14 chr4 57559175 57559479 + 0.30102999566397 NA Intergenic Intergenic -8921 NM_001304544 677884 Mm.331630 NM_001304544 ENSMUSG00000089945 Pakap AF064781|Gm20459|Palm2-Akap2|Palm2Akap2|Palm2akap2 paralemmin A kinase anchor protein protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-7 chr15 85042220 85042607 + 0.30102999566397 NA promoter-TSS (NM_001356616) promoter-TSS (NM_001356616) -329 NM_001356616 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak2_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397-4 chr6 71908403 71909040 + 0.30102999566397 NA promoter-TSS (NM_009088) promoter-TSS (NM_009088) 41 NR_155285 69956 Mm.30256 NM_027275 ENSMUSG00000063884 Ptcd3 2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39 pentatricopeptide repeat domain 3 protein-coding common_peak1_118_97_-0.0102749167778704_6.60957238572627_0.30102999566397 chr19 17257185 17258123 + 0.30102999566397 NA Intergenic Intergenic 81851 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397-2 chr15 27415206 27415673 + 0.30102999566397 NA Intergenic Intergenic -51238 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397 chr13 38658473 38659046 + 0.30102999566397 NA intron (NM_025380, intron 1 of 3) CpG 269 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding common_peak1_79_66_-0.030502206632586_6.05083808714148_0.30102999566397 chr11 84079192 84079810 + 0.30102999566397 NA 3' UTR (NM_172562, exon 16 of 16) 3' UTR (NM_172562, exon 16 of 16) -11144 NM_019819 56405 Mm.240885 NM_019819 ENSMUSG00000018648 Dusp14 1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6 dual specificity phosphatase 14 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-16 chr7 141391668 141392119 + 0.30102999566397 NA promoter-TSS (NM_011528) promoter-TSS (NM_011528) -267 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding common_peak1_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397 chr12 99392372 99392874 + 0.30102999566397 NA intron (NM_183186, intron 1 of 5) CpG 57451 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_117_96_-0.00756673643769279_6.59612947396828_0.30102999566397-3 chr6 85452077 85452962 + 0.30102999566397 NA promoter-TSS (NR_028081) promoter-TSS (NR_028081) -549 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak2_65_54_-0.0213487087001454_5.77068535917459_0.30102999566397-2 chr15 74988355 74989191 + 0.30102999566397 NA Intergenic Intergenic -5343 NM_020498 57248 Mm.358339 NM_020498 ENSMUSG00000022586 Ly6i AI789751|Ly-6I|Ly-6M lymphocyte antigen 6 complex, locus I protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-15 chr8 91395184 91395598 + 0.30102999566397 NA intron (NM_011936, intron 1 of 8) intron (NM_011936, intron 1 of 8) 81866 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak2_79_66_-0.030502206632586_6.05083808714148_0.30102999566397 chr13 12460740 12461444 + 0.30102999566397 NA intron (NM_001291057, intron 1 of 8) intron (NM_001291057, intron 1 of 8) 646 NM_001291060 56048 Mm.474138 NM_018886 ENSMUSG00000057554 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-5 chr14 7809254 7809491 + 0.30102999566397 NA Intergenic Intergenic -8585 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_117_96_-0.00756673643769279_6.59612947396828_0.30102999566397 chr7 73618617 73619542 + 0.30102999566397 NA Intergenic Intergenic -60684 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-15 chr7 79270527 79271149 + 0.30102999566397 NA Intergenic Intergenic -2428 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-9 chr17 79020623 79021007 + 0.30102999566397 NA promoter-TSS (NM_029239) promoter-TSS (NM_029239) 1 NM_001171004 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-14 chr6 17545477 17545946 + 0.30102999566397 NA intron (NM_008591, intron 12 of 21) intron (NM_008591, intron 12 of 21) 81754 NM_008591 17295 Mm.86844 NM_008591 ENSMUSG00000009376 Met AI838057|HGF|HGFR|Par4|c-Met met proto-oncogene protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-2 chr10 62330039 62330382 + 0.30102999566397 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 10211 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397-2 chr15 74672917 74673521 + 0.30102999566397 NA promoter-TSS (NM_001276684) promoter-TSS (NM_001276684) -649 NM_018790 11838 Mm.491310 NM_018790 ENSMUSG00000022602 Arc Arc3.1|C86064|arg3.1|mArc activity regulated cytoskeletal-associated protein protein-coding common_peak1_118_97_-0.0102749167778704_6.60957238572627_0.30102999566397-2 chr5 30906684 30907684 + 0.30102999566397 NA TTS (NR_122117) TTS (NR_122117) 604 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-12 chr19 17386081 17386377 + 0.30102999566397 NA Intergenic Intergenic -7814 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397 chr1 51145095 51145661 + 0.30102999566397 NA intron (NM_019790, intron 7 of 9) intron (NM_019790, intron 7 of 9) -143748 NM_138741 20324 Mm.398690 NM_138741 ENSMUSG00000045954 Cavin2 Sdpr caveolae associated 2 protein-coding common_peak2_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397-3 chr2 156180535 156181477 + 0.30102999566397 NA promoter-TSS (NM_001291114) promoter-TSS (NM_001291114) -768 NM_133242 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak1_80_66_-0.0127067373301584_6.05973582179269_0.30102999566397-3 chr5 76974719 76975375 + 0.30102999566397 NA intron (NM_025691, intron 1 of 18) CpG 346 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak2_65_54_-0.0213487087001454_5.77068535917459_0.30102999566397-5 chr19 40477803 40478280 + 0.30102999566397 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -26643 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-11 chr18 84087632 84087936 + 0.30102999566397 NA promoter-TSS (NM_146090) promoter-TSS (NM_146090) -374 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-4 chr13 12395353 12395774 + 0.30102999566397 NA intron (NM_144835, intron 1 of 44) CpG 188 NM_144835 217995 Mm.171186 NM_144835 ENSMUSG00000050244 Heatr1 AA517551|B130016L12Rik|BC019693 HEAT repeat containing 1 protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-3 chr11 35933295 35933652 + 0.30102999566397 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 46616 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-13 chr3 51564861 51565457 + 0.30102999566397 NA intron (NR_033624, intron 4 of 4) intron (NR_033624, intron 4 of 4) -4336 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding common_peak1_80_66_-0.0127067373301584_6.05973582179269_0.30102999566397 chr11 118247437 118248451 + 0.30102999566397 NA intron (NM_011180, intron 1 of 12) CpG 648 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_71_59_-0.0222343265090581_5.89577343235399_0.30102999566397-3 chr17 35703738 35704635 + 0.30102999566397 NA promoter-TSS (NM_172962) promoter-TSS (NM_172962) -47 NM_172962 12305 Mm.5021 NM_007584 ENSMUSG00000003534 Ddr1 6030432F18|AI323681|CD167a|Cak|Nep|PTK3A discoidin domain receptor family, member 1 protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-6 chr15 80912720 80913044 + 0.30102999566397 NA intron (NM_177124, intron 14 of 21) intron (NM_177124, intron 14 of 21) -27157 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-7 chr15 83575562 83575947 + 0.30102999566397 NA 3' UTR (NM_183017, exon 14 of 14) 3' UTR (NM_183017, exon 14 of 14) 12181 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak1_117_96_-0.00756673643769279_6.59612947396828_0.30102999566397 chr11 84879570 84880977 + 0.30102999566397 NA promoter-TSS (NM_025414) promoter-TSS (NM_025414) 12 NM_001077636 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding common_peak1_80_66_-0.0127067373301584_6.05973582179269_0.30102999566397-2 chr19 5106396 5107092 + 0.30102999566397 NA intron (NM_029576, intron 1 of 5) CpG 252 NM_029576 76308 Mm.182563 NM_029576 ENSMUSG00000024870 Rab1b 1110011F09Rik RAB1B, member RAS oncogene family protein-coding common_peak1_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-8 chr15 97820660 97820997 + 0.30102999566397 NA intron (NM_001204280, intron 1 of 21) intron (NM_001204280, intron 1 of 21) -5965 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_65_54_-0.0213487087001454_5.77068535917459_0.30102999566397-3 chr18 77713197 77713945 + 0.30102999566397 NA promoter-TSS (NR_027978) promoter-TSS (NR_027978) 439 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-12 chr5 35617628 35617949 + 0.30102999566397 NA Intergenic Intergenic -29025 NR_045807 74364 Mm.473123 NM_175208 ENSMUSG00000055061 4931431C16Rik - RIKEN cDNA 4931431C16 gene ncRNA common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397 chr1 181143691 181144146 + 0.30102999566397 NA intron (NM_026171, intron 1 of 22) intron (NM_026171, intron 1 of 22) 286 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding common_peak2_27_23_-0.053263406929231_4.55833079725654_0.30102999566397-13 chr5 112281351 112281880 + 0.30102999566397 NA intron (NM_001326590, intron 1 of 5) intron (NM_001326590, intron 1 of 5) 4924 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-8 chrX 159627639 159628250 + 0.301029995663967 NA intron (NM_001135727, intron 1 of 17) intron (NM_001135727, intron 1 of 17) 672 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-4 chr2 110187784 110188272 + 0.301029995663967 NA Intergenic Intergenic 117697 NM_130452 170442 Mm.27335 NM_130452 ENSMUSG00000041660 Bbox1 AI874739 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) protein-coding common_peak1_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967 chr12 76529125 76529754 + 0.301029995663967 NA Intergenic Intergenic 3773 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-11 chr8 70644715 70645409 + 0.301029995663967 NA Intergenic Intergenic -12606 NM_001330687 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-2 chr11 103387692 103388323 + 0.301029995663967 NA intron (NM_183034, intron 4 of 11) intron (NM_183034, intron 4 of 11) -24315 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-6 chr2 156392432 156393006 + 0.301029995663967 NA non-coding (NR_024329, exon 1 of 1) non-coding (NR_024329, exon 1 of 1) 260 NR_024329 347740 Mm.324242 NR_024329 ENSMUSG00000102869 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA common_peak1_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-2 chr4 82265587 82266450 + 0.301029995663967 NA Intergenic Intergenic -200128 NR_151604 102635575 Mm.403314 NR_151604 ENSMUSG00000087110 Gm11264 - predicted gene 11264 ncRNA common_peak1_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-4 chr7 99323048 99323467 + 0.301029995663967 NA intron (NM_010837, intron 3 of 3) intron (NM_010837, intron 3 of 3) 29982 NM_009825 12406 Mm.22708 NM_009825 ENSMUSG00000070436 Serpinh1 BERF-1|Cbp1|Cbp2|Hsp47|J6|Serpinh2|gp46 serine (or cysteine) peptidase inhibitor, clade H, member 1 protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-3 chr17 87826499 87826993 + 0.301029995663967 NA Intergenic Intergenic -28752 NM_199251 210741 Mm.312046 NM_199251 ENSMUSG00000050138 Kcnk12 mntk1 potassium channel, subfamily K, member 12 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967 chr13 104285287 104286229 + 0.301029995663967 NA Intergenic Intergenic -2077 NR_136938 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-7 chr6 145075376 145075918 + 0.301029995663967 NA intron (NM_007532, intron 1 of 10) CpG 510 NM_007532 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-6 chr3 146045281 146045915 + 0.301029995663967 NA intron (NM_172864, intron 20 of 22) intron (NM_172864, intron 20 of 22) 57728 NM_001166064 214804 Mm.268854 NM_001166064 ENSMUSG00000036863 Syde2 C430017H16Rik synapse defective 1, Rho GTPase, homolog 2 (C. elegans) protein-coding common_peak1_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967 chr2 153240911 153241398 + 0.301029995663967 NA promoter-TSS (NM_080463) promoter-TSS (NM_080463) 204 NM_018807 54711 Mm.103199 NM_018807 ENSMUSG00000051413 Plagl2 AU018672|AW552839|mKIAA0198 pleiomorphic adenoma gene-like 2 protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967 chr17 65940148 65940645 + 0.301029995663967 NA intron (NM_023053, intron 2 of 4) intron (NM_023053, intron 2 of 4) 10791 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-8 chr5 142963682 142964004 + 0.301029995663967 NA intron (NM_007984, intron 1 of 4) intron (NM_007984, intron 1 of 4) 3488 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-7 chr6 113237902 113238482 + 0.301029995663967 NA intron (NM_001362185, intron 1 of 16) intron (NM_001362185, intron 1 of 16) 349 NR_155433 97287 Mm.197816 NM_026849 ENSMUSG00000030269 Mtmr14 1110061O04Rik|AW553738|C76151 myotubularin related protein 14 protein-coding common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-5 chr2 114174600 114175282 + 0.301029995663967 NA intron (NM_001290788, intron 1 of 33) intron (NM_001290788, intron 1 of 33) 398 NM_009702 11834 Mm.2545 NM_009702 ENSMUSG00000040383 Aqr AW495846|mKIAA0560 aquarius protein-coding common_peak1_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-2 chr4 141273100 141273836 + 0.301029995663967 NA Intergenic Intergenic -4971 NR_151527 100503810 NR_151527 ENSMUSG00000085395 Gm13056 - predicted gene 13056 ncRNA common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-6 chr2 153240955 153241343 + 0.301029995663967 NA promoter-TSS (NM_080463) promoter-TSS (NM_080463) 209 NM_018807 54711 Mm.103199 NM_018807 ENSMUSG00000051413 Plagl2 AU018672|AW552839|mKIAA0198 pleiomorphic adenoma gene-like 2 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-12 chr9 44267568 44268098 + 0.301029995663967 NA intron (NM_001163742, intron 1 of 9) intron (NM_001163742, intron 1 of 9) 354 NM_001163743 270151 Mm.3957 NM_178420 ENSMUSG00000032109 Nlrx1 BC034204|NOD9 NLR family member X1 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-5 chr2 119351322 119351727 + 0.301029995663967 NA exon (NM_026929, exon 1 of 3) exon (NM_026929, exon 1 of 3) 282 NM_026929 69065 Mm.35083 NM_026929 ENSMUSG00000027313 Chac1 1810008K03Rik ChaC, cation transport regulator 1 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-4 chr2 101986876 101987817 + 0.301029995663967 NA intron (NM_178886, intron 4 of 5) intron (NM_178886, intron 4 of 5) 101084 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967 chr11 69766095 69766579 + 0.301029995663967 NA intron (NM_029348, intron 1 of 3) CpG 425 NM_029348 75580 Mm.426361 NM_029348 ENSMUSG00000018750 Zbtb4 2310026P19Rik|9230111I22Rik|mKIAA1538 zinc finger and BTB domain containing 4 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-9 chr9 67229446 67230170 + 0.301029995663967 NA intron (NM_001081242, intron 53 of 57) intron (NM_001081242, intron 53 of 57) 6918 NR_029576 387185 NR_029576 ENSMUSG00000076379 Mir190a Mir190|Mirn190|mir-190|mir-190a|mmu-mir-190|mmu-mir-190a microRNA 190a ncRNA common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-10 chr8 60746048 60746754 + 0.301029995663967 NA Intergenic Intergenic 90844 NM_001177882 71306 Mm.23242 NM_027756 ENSMUSG00000031647 Mfap3l 4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626 microfibrillar-associated protein 3-like protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-4 chr18 8127095 8127724 + 0.301029995663967 NA Intergenic Intergenic 257696 NM_001360956 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-5 chr2 127008645 127009355 + 0.301029995663967 NA intron (NM_175550, intron 1 of 20) CpG 289 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding common_peak1_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967 chr17 25133444 25133935 + 0.301029995663967 NA intron (NM_011930, intron 1 of 24) intron (NM_011930, intron 1 of 24) 298 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-8 chr8 110825670 110825910 + 0.301029995663967 NA intron (NM_133953, intron 12 of 25) intron (NM_133953, intron 12 of 25) 12808 NR_028559 100217465 NR_028559 Snord111 MBII-82 small nucleolar RNA, C/D box 111 snoRNA common_peak2_41_35_-0.0573903054229321_5.14122984873085_0.301029995663967-2 chr17 69156866 69157140 + 0.301029995663967 NA intron (NM_013813, intron 1 of 21) CpG 259 NM_013813 13823 Mm.131135 NM_013813 ENSMUSG00000024044 Epb41l3 4.1B|DAL1P|Dal1|Epb4.1l3|NBL3 erythrocyte membrane protein band 4.1 like 3 protein-coding common_peak1_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-3 chr6 7844845 7845424 + 0.301029995663967 NA promoter-TSS (NM_052993) promoter-TSS (NM_052993) -90 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-13 chr9 75193770 75194282 + 0.301029995663967 NA exon (NM_010864, exon 31 of 41) exon (NM_010864, exon 31 of 41) -37988 NM_001081322 208943 Mm.41339 NM_001081322 ENSMUSG00000033590 Myo5c 9130003O20Rik|BB085560|C330029I24 myosin VC protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-2 chr15 25365318 25365811 + 0.301029995663967 NA intron (NM_027395, intron 1 of 1) intron (NM_027395, intron 1 of 1) 48200 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-9 chr8 45719421 45720081 + 0.301029995663967 NA intron (NM_001310708, intron 1 of 19) ID_B1|SINE|B4 57758 NM_001310708 234214 Mm.211096 NM_172752 ENSMUSG00000031626 Sorbs2 2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777|nArgBP2 sorbin and SH3 domain containing 2 protein-coding common_peak2_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-3 chr15 79690927 79691288 + 0.301029995663967 NA intron (NM_013818, intron 1 of 11) CpG 211 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak1_42_35_-0.0236824712328803_5.15808376582587_0.301029995663967-5 chr9 15306326 15306601 + 0.301029995663967 NA promoter-TSS (NM_001199484) promoter-TSS (NM_001199484) -15 NM_001199484 70984 Mm.261842 NM_133732 ENSMUSG00000031938 4931406C07Rik - RIKEN cDNA 4931406C07 gene protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-3 chr19 40519185 40519611 + 0.301029995663967 NA Intergenic Intergenic -5586 NM_009166 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_46_39_-0.0482667915853083_5.29779469909471_0.301029995663967-7 chr4 127243749 127244206 + 0.301029995663967 NA intron (NM_030252, intron 1 of 1) CpG 193 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding common_peak2_60_50_-0.025269272668619_5.65979070563719_0.301029995663963-3 chr7 38227417 38227925 + 0.301029995663963 NA intron (NM_024413, intron 1 of 1) intron (NM_024413, intron 1 of 1) 323 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_60_50_-0.025269272668619_5.65979070563719_0.301029995663963 chr17 42909840 42910576 + 0.301029995663963 NA Intergenic Intergenic -33784 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding common_peak2_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-4 chr2 26964052 26964917 + 0.301029995663963 NA promoter-TSS (NM_207234) promoter-TSS (NM_207234) -98 NM_207234 227656 Mm.291874 NM_207234 ENSMUSG00000052406 Rexo4 Gm111|Rex4|Xpmc2h REX4, 3'-5' exonuclease protein-coding common_peak1_87_72_-0.017704135856202_6.18097249095192_0.301029995663963-2 chr7 16415695 16417121 + 0.301029995663963 NA intron (NM_198631, intron 1 of 13) B1F2|SINE|Alu 15212 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_87_72_-0.017704135856202_6.18097249095192_0.301029995663963 chr5 136479662 136480346 + 0.301029995663963 NA intron (NM_001291238, intron 2 of 22) intron (NM_001291238, intron 2 of 22) 85977 NM_001291239 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-3 chr7 38018843 38019454 + 0.301029995663963 NA exon (NM_011274, exon 1 of 11) exon (NM_011274, exon 1 of 11) 404 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak2_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-3 chr2 25607907 25608577 + 0.301029995663963 NA TTS (NM_029859) TTS (NM_029859) 204 NM_001024616 227624 Mm.29600 NM_001024616 ENSMUSG00000015087 Rabl6 B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf RAB, member RAS oncogene family-like 6 protein-coding common_peak1_74_62_-0.034145459120154_5.96020719393984_0.301029995663963 chr15 27415164 27415625 + 0.301029995663963 NA Intergenic Intergenic -51283 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak1_60_50_-0.025269272668619_5.65979070563719_0.301029995663963 chr11 35940326 35941289 + 0.301029995663963 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 39282 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_60_50_-0.025269272668619_5.65979070563719_0.301029995663963-2 chr12 108178432 108179208 + 0.301029995663963 NA promoter-TSS (NM_009832) promoter-TSS (NM_009832) 464 NM_028262 52690 Mm.159185 NM_028262 ENSMUSG00000056770 Setd3 2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e SET domain containing 3 protein-coding common_peak1_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-4 chr7 84528025 84528919 + 0.301029995663963 NA promoter-TSS (NR_045098) promoter-TSS (NR_045098) -482 NR_045098 100039239 Mm.44882 NR_045098 Gm2115 C77713 predicted gene 2115 ncRNA common_peak2_74_62_-0.034145459120154_5.96020719393984_0.301029995663963 chr18 65738821 65739675 + 0.301029995663963 NA intron (NM_177028, intron 9 of 14) intron (NM_177028, intron 9 of 14) 40980 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak1_60_50_-0.025269272668619_5.65979070563719_0.301029995663963-3 chr4 129742476 129743092 + 0.301029995663963 NA promoter-TSS (NR_045036) promoter-TSS (NR_045036) -481 NR_045036 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak2_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963 chr17 75345414 75346729 + 0.301029995663963 NA intron (NM_001331234, intron 20 of 28) intron (NM_001331234, intron 20 of 28) -89834 NM_001166493 240168 Mm.329203 NM_207246 ENSMUSG00000071042 Rasgrp3 BC066069|Gm327 RAS, guanyl releasing protein 3 protein-coding common_peak2_87_72_-0.017704135856202_6.18097249095192_0.301029995663963 chr11 35976971 35978008 + 0.301029995663963 NA intron (NM_170779, intron 1 of 22) intron (NM_170779, intron 1 of 22) 2600 NM_170779 211652 Mm.31267 NM_170779 ENSMUSG00000018849 Wwc1 AA408228|AU017197|BC037006|Kibra|mKIAA0869 WW, C2 and coiled-coil domain containing 1 protein-coding common_peak1_60_50_-0.025269272668619_5.65979070563719_0.301029995663963 chr1 106718809 106719660 + 0.301029995663963 NA Intergenic Intergenic -4944 NM_177410 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-5 chr8 64947281 64947684 + 0.301029995663963 NA intron (NM_001163747, intron 1 of 4) CpG 297 NM_028427 73067 Mm.294445 NM_028427 ENSMUSG00000025521 Tmem192 3110005G23Rik transmembrane protein 192 protein-coding common_peak1_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-2 chr7 16206868 16207497 + 0.301029995663963 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 14811 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963-2 chr19 5945384 5946187 + 0.301029995663963 NA intron (NM_001164057, intron 13 of 17) intron (NM_001164057, intron 13 of 17) 18421 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak1_75_62_-0.0151714485280143_5.96969419923591_0.301029995663963 chr5 129018997 129019933 + 0.301029995663963 NA promoter-TSS (NM_009391) promoter-TSS (NM_009391) -691 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak1_74_62_-0.034145459120154_5.96020719393984_0.301029995663963-2 chr17 26561227 26562283 + 0.301029995663963 NA intron (NM_026170, intron 1 of 9) CpG 243 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_60_50_-0.025269272668619_5.65979070563719_0.301029995663963-2 chr5 33274189 33274945 + 0.301029995663963 NA intron (NM_001198860, intron 1 of 9) CpG 437 NM_001310535 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding common_peak1_130_107_-0.0128251937210777_6.74847490530293_0.301029995663957 chr11 113682898 113684009 + 0.301029995663957 NA promoter-TSS (NM_001361593) promoter-TSS (NM_001361593) 698 NM_138598 28081 Mm.351688 NM_138598 ENSMUSG00000041629 Fam104a D11Wsu99e family with sequence similarity 104, member A protein-coding common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-2 chr11 105589997 105590486 + 0.301029995663957 NA 5' UTR (NM_181071, exon 1 of 26) 5' UTR (NM_181071, exon 1 of 26) 255 NM_181071 77097 Mm.22501 NM_175492 ENSMUSG00000053580 Tanc2 3526402J09Rik|5730590C14Rik tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding common_peak1_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-2 chr10 80589582 80590242 + 0.301029995663957 NA intron (NM_145421, intron 1 of 4) intron (NM_145421, intron 1 of 4) 429 NM_145421 216169 Mm.29802 NM_145421 ENSMUSG00000003346 Abhd17a 1700013O15Rik|BC005632|D10Bwg1364e|Fam108a abhydrolase domain containing 17A protein-coding common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-3 chr2 137456042 137456471 + 0.301029995663957 NA Intergenic Intergenic -339736 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-8 chr7 45830054 45830657 + 0.301029995663957 NA exon (NM_153419, exon 2 of 7) exon (NM_153419, exon 2 of 7) 434 NR_152183 101612 Mm.274847 NM_153419 ENSMUSG00000053801 Grwd1 A301|AI504353|Grwd|Wdr28 glutamate-rich WD repeat containing 1 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-3 chr11 86543914 86544723 + 0.301029995663957 NA promoter-TSS (NM_001199047) promoter-TSS (NM_001199047) 489 NM_028259 72508 Mm.394280 NM_028259 ENSMUSG00000020516 Rps6kb1 2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|P70S6K1|S6K|S6K1|p70/85s6k|p70s6k ribosomal protein S6 kinase, polypeptide 1 protein-coding common_peak1_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-4 chr5 123394604 123395353 + 0.301029995663957 NA exon (NM_177582, exon 1 of 9) exon (NM_177582, exon 1 of 9) 180 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-6 chr4 156192189 156192527 + 0.301029995663957 NA intron (NM_021604, intron 2 of 35) intron (NM_021604, intron 2 of 35) 5130 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-2 chr13 102894610 102895464 + 0.301029995663957 NA intron (NM_175171, intron 4 of 28) intron (NM_175171, intron 4 of 28) 134782 NR_130171 76624 Mm.426384 NR_130171 ENSMUSG00000091906 1700099I09Rik - RIKEN cDNA 1700099I09 gene ncRNA common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-7 chr7 27473905 27474488 + 0.301029995663957 NA intron (NM_133210, intron 1 of 1) intron (NM_133210, intron 1 of 1) 356 NM_133210 170742 Mm.200120 NM_133210 ENSMUSG00000055200 Sertad3 AW124805|D1Mgi51|Rbt1|Sei3 SERTA domain containing 3 protein-coding common_peak1_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-5 chr5 142960410 142961118 + 0.301029995663957 NA exon (NM_007984, exon 1 of 5) exon (NM_007984, exon 1 of 5) 409 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-2 chr10 127289877 127290271 + 0.301029995663957 NA promoter-TSS (NM_007837) promoter-TSS (NM_007837) -719 NM_007837 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak1_88_73_-0.0211461392290229_6.19888029601444_0.301029995663957-4 chr8 82639891 82640576 + 0.301029995663957 NA Intergenic Intergenic 133893 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-6 chr6 5297871 5298456 + 0.301029995663957 NA intron (NM_183308, intron 1 of 8) CpG 210 NM_183308 330260 Mm.126984 NM_183308 ENSMUSG00000032667 Pon2 6330405I24Rik|AI481612 paraoxonase 2 protein-coding common_peak2_130_107_-0.0128251937210777_6.74847490530293_0.301029995663957-2 chr5 145204548 145205798 + 0.301029995663957 NA 5' UTR (NM_001167944, exon 1 of 4) 5' UTR (NM_001167944, exon 1 of 4) 614 NM_001359188 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957 chr1 34120838 34121342 + 0.301029995663957 NA intron (NM_001276764, intron 8 of 102) intron (NM_001276764, intron 8 of 102) 3731 NR_105861 102466987 NR_105861 ENSMUSG00000105982 Mir6896 mmu-mir-6896 microRNA 6896 ncRNA common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-4 chr17 35234869 35235658 + 0.301029995663957 NA intron (NM_001347351, intron 1 of 3) intron (NM_001347351, intron 1 of 3) 253 NM_001347351 66237 Mm.396107 NM_023179 ENSMUSG00000024403 Atp6v1g2 1500002D01Rik|Atp6g2|NG38|VAG2 ATPase, H+ transporting, lysosomal V1 subunit G2 protein-coding common_peak1_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957 chr1 52499529 52500198 + 0.301029995663957 NA intron (NM_008667, intron 1 of 7) intron (NM_008667, intron 1 of 7) 585 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_130_107_-0.0128251937210777_6.74847490530293_0.301029995663957-2 chr15 82898648 82899801 + 0.301029995663957 NA promoter-TSS (NR_027799) promoter-TSS (NR_027799) 144 NR_045068 100504637 Mm.440928 NR_045068 ENSMUSG00000100199 Gm20324 - predicted gene, 20324 ncRNA common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-4 chr4 155237729 155238340 + 0.301029995663957 NA Intergenic Intergenic -11932 NM_001190445 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_88_73_-0.0211461392290229_6.19888029601444_0.301029995663957 chr6 127991876 127992600 + 0.301029995663957 NA intron (NM_001356301, intron 2 of 7) intron (NM_001356301, intron 2 of 7) 104616 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-4 chr5 36712470 36713156 + 0.301029995663957 NA Intergenic Intergenic -16792 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-5 chr4 43972566 43973087 + 0.301029995663957 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -10678 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak1_163_134_-0.0129110090236368_7.07036009253901_0.301029995663957 chr2 173257846 173259344 + 0.301029995663957 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 17938 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_92_76_-0.0155013989146644_6.25903584123757_0.301029995663957 chr10 80928722 80929791 + 0.301029995663957 NA promoter-TSS (NM_008655) promoter-TSS (NM_008655) -835 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_125_103_-0.0141243994675007_6.69337751840734_0.301029995663957-2 chr5 35036085 35037381 + 0.301029995663957 NA Intergenic Intergenic -4776 NM_019447 54426 Mm.27369 NM_019447 ENSMUSG00000029102 Hgfac HGFA hepatocyte growth factor activator protein-coding common_peak1_113_93_-0.0116447744782811_6.5487664644385_0.301029995663957 chr13 60020029 60021344 + 0.301029995663957 NA Intergenic Intergenic -9025 NR_046142 328263 Mm.123405 NR_046142 ENSMUSG00000114531 A530065N20Rik A530065N20 RIKEN cDNA A530046M15 gene ncRNA common_peak1_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-3 chr5 96997810 96998289 + 0.301029995663957 NA exon (NM_080708, exon 1 of 16) exon (NM_080708, exon 1 of 16) 360 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-6 chr8 106400073 106400574 + 0.301029995663957 NA Intergenic Intergenic -15016 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak2_238_194_-0.00394399719931648_7.60535831514995_0.301029995663957 chr11 120250896 120252809 + 0.301029995663957 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 18905 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_113_93_-0.0116447744782811_6.5487664644385_0.301029995663957-2 chr12 86946551 86947768 + 0.301029995663957 NA promoter-TSS (NM_001289432) promoter-TSS (NM_001289432) 118 NM_001289430 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak1_88_73_-0.0211461392290229_6.19888029601444_0.301029995663957-2 chr16 38562781 38563697 + 0.301029995663957 NA intron (NM_026407, intron 1 of 8) intron (NM_026407, intron 1 of 8) 425 NM_026407 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-5 chr8 11542530 11543029 + 0.301029995663957 NA intron (NM_001359137, intron 3 of 14) intron (NM_001359137, intron 3 of 14) 7992 NM_024248 71941 Mm.196576 NM_024248 ENSMUSG00000056228 Cars2 2310051N18Rik|2410044A07Rik|D530030H10Rik|cysRS cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding unique_peak1_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957 chr16 97717097 97717880 + 0.301029995663957 NA Intergenic Intergenic 46267 NM_023663 72388 Mm.35290 NM_023663 ENSMUSG00000005251 Ripk4 2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4 receptor-interacting serine-threonine kinase 4 protein-coding common_peak2_130_107_-0.0128251937210777_6.74847490530293_0.301029995663957 chr13 30659541 30660705 + 0.301029995663957 NA promoter-TSS (NM_001037955) promoter-TSS (NM_001037955) 64 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-7 chr8 121950184 121950464 + 0.301029995663957 NA promoter-TSS (NM_001110100) promoter-TSS (NM_001110100) -168 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-3 chr15 79403398 79403671 + 0.301029995663957 NA promoter-TSS (NM_001253817) promoter-TSS (NM_001253817) -231 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-7 chr8 122611690 122612134 + 0.301029995663957 NA promoter-TSS (NM_016722) promoter-TSS (NM_016722) 286 NM_021502 59005 Mm.38746 NM_021502 ENSMUSG00000015013 Trappc2l 1810017G16Rik|AB030200|Hspc176|Tca17 trafficking protein particle complex 2-like protein-coding common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957 chr10 93799268 93799735 + 0.301029995663957 NA Intergenic Intergenic -32054 NM_001206851 327799 Mm.491598 NM_183199 ENSMUSG00000020020 Usp44 E430004F17Rik ubiquitin specific peptidase 44 protein-coding common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-6 chr7 113369534 113370270 + 0.301029995663957 NA promoter-TSS (NM_133700) promoter-TSS (NM_133700) -563 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak1_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-2 chr16 10980757 10981725 + 0.301029995663957 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 11880 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_88_73_-0.0211461392290229_6.19888029601444_0.301029995663957-2 chr8 82639854 82640566 + 0.301029995663957 NA Intergenic Intergenic 133916 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-4 chr2 174110360 174110912 + 0.301029995663957 NA intron (NM_213733, intron 1 of 11) CpG 285 NM_213733 228961 Mm.295629 NM_213733 ENSMUSG00000039263 Npepl1 BC023239|C85514|mKIAA1974 aminopeptidase-like 1 protein-coding common_peak2_92_76_-0.0155013989146644_6.25903584123757_0.301029995663957 chr9 13827767 13828427 + 0.301029995663957 NA promoter-TSS (NM_001310721) promoter-TSS (NM_001310721) 381 NM_176836 72826 Mm.246174 NM_176836 ENSMUSG00000037808 Fam76b 2810485I05Rik|C78303 family with sequence similarity 76, member B protein-coding common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-2 chr13 112926836 112927384 + 0.301029995663957 NA promoter-TSS (NM_172594) promoter-TSS (NM_172594) 270 NM_028151 72198 Mm.291029 NM_028151 ENSMUSG00000016018 Skiv2l2 2610528A15Rik|Mtrex|mKIAA0052 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-7 chr9 107534069 107534371 + 0.301029995663957 NA 5' UTR (NM_019704, exon 1 of 2) 5' UTR (NM_019704, exon 1 of 2) 275 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-5 chr3 135628202 135628668 + 0.301029995663957 NA intron (NM_008689, intron 6 of 24) intron (NM_008689, intron 6 of 24) 63112 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957 chr13 55487387 55488031 + 0.301029995663957 NA intron (NM_001177371, intron 1 of 14) CpG 367 NM_001177371 56320 Mm.19016 NM_019813 ENSMUSG00000034675 Dbn1 - drebrin 1 protein-coding common_peak1_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957-4 chr6 99026839 99027483 + 0.301029995663957 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) 1137 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_53_44_-0.0193062454295152_5.48219997361492_0.301029995663957-3 chr15 79670914 79671403 + 0.301029995663957 NA intron (NM_172609, intron 1 of 3) CpG 290 NM_172609 223696 Mm.246435 NM_172609 ENSMUSG00000022427 Tomm22 2310047D01|Tom22 translocase of outer mitochondrial membrane 22 protein-coding common_peak1_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-5 chr6 108704036 108704503 + 0.301029995663957 NA Intergenic Intergenic -43335 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_40_34_-0.0512684697712844_5.10364878205932_0.301029995663957-3 chr16 77013777 77014263 + 0.301029995663957 NA promoter-TSS (NM_013918) promoter-TSS (NM_013918) -49 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding common_peak1_88_73_-0.0211461392290229_6.19888029601444_0.301029995663957 chr15 64472216 64473466 + 0.301029995663957 NA Intergenic Intergenic -89922 NM_010026 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957 chr1 84837896 84838579 + 0.301029995663957 NA intron (NM_133975, intron 1 of 40) intron (NM_133975, intron 1 of 40) 1067 NM_133975 14897 Mm.209265 NM_133975 ENSMUSG00000026219 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|TRIP-12 thyroid hormone receptor interactor 12 protein-coding common_peak1_200_164_-0.0109885739512174_7.36082792727021_0.301029995663957 chr19 36925296 36926948 + 0.301029995663957 NA promoter-TSS (NM_001080706) promoter-TSS (NM_001080706) 43 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding common_peak1_242_198_-0.00946154476182404_7.63189384816274_0.301029995663957 chr18 36491161 36493820 + 0.301029995663957 NA Intergenic ID_B1|SINE|B4 23315 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding common_peak1_88_73_-0.0211461392290229_6.19888029601444_0.301029995663957-3 chr4 155250033 155250892 + 0.301029995663957 NA non-coding (NR_033802, exon 1 of 3) non-coding (NR_033802, exon 1 of 3) 496 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak2_113_93_-0.0116447744782811_6.5487664644385_0.301029995663957 chr12 80366929 80368510 + 0.301029995663957 NA intron (NM_177267, intron 6 of 8) intron (NM_177267, intron 6 of 8) 23958 NR_037207 100526530 NR_037207 ENSMUSG00000105972 Mir1843a Mir1843|mir-1843a|mmu-mir-1843|mmu-mir-1843a microRNA 1843a ncRNA common_peak2_125_103_-0.0141243994675007_6.69337751840734_0.301029995663957 chr12 111758452 111759565 + 0.301029995663957 NA 5' UTR (NM_001025358, exon 1 of 15) 5' UTR (NM_001025358, exon 1 of 15) 140 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak1_52_44_-0.0460830410598145_5.46881157579977_0.301029995663957 chr11 115970262 115971110 + 0.301029995663957 NA Intergenic B4|SINE|B4 -4039 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_93_77_-0.0187958951334384_6.27600427129553_0.301029995663951 chr14 25472947 25474515 + 0.301029995663951 NA intron (NM_183208, intron 1 of 23) intron (NM_183208, intron 1 of 23) 14546 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_94_78_-0.0220153744513221_6.29277306095144_0.301029995663951 chr11 21091416 21092251 + 0.301029995663951 NA intron (NM_023324, intron 1 of 6) CpG 509 NM_023324 67245 Mm.28957 NM_023324 ENSMUSG00000020134 Peli1 2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e pellino 1 protein-coding common_peak2_93_77_-0.0187958951334384_6.27600427129553_0.301029995663951-3 chr7 45123419 45124339 + 0.301029995663951 NA promoter-TSS (NR_000004) promoter-TSS (NR_000004) 510 NM_013725 27207 Mm.196538 NM_013725 ENSMUSG00000003429 Rps11 - ribosomal protein S11 protein-coding common_peak2_93_77_-0.0187958951334384_6.27600427129553_0.301029995663951-2 chr3 121684905 121685707 + 0.301029995663951 NA Intergenic Intergenic 14543 NM_001033814 619318 Mm.371258 NM_001033814 ENSMUSG00000074248 4930432M17Rik - RIKEN cDNA 4930432M17 gene protein-coding common_peak2_94_78_-0.0220153744513221_6.29277306095144_0.301029995663951 chr3 40681711 40682479 + 0.301029995663951 NA intron (NM_175515, intron 7 of 15) intron (NM_175515, intron 7 of 15) -26776 NM_178386 73333 Mm.78691 NM_178386 ENSMUSG00000069041 Slc25a31 1700034J06Rik|Ant4|Sfec solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 protein-coding common_peak1_94_78_-0.0220153744513221_6.29277306095144_0.301029995663951-2 chr6 11906506 11907690 + 0.301029995663951 NA promoter-TSS (NM_001362123) promoter-TSS (NM_001362123) 352 NM_010886 17992 Mm.415865 NM_010886 ENSMUSG00000029632 Ndufa4 MLRQ NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 protein-coding common_peak1_93_77_-0.0187958951334384_6.27600427129553_0.301029995663951-3 chr5 124540713 124541467 + 0.301029995663951 NA intron (NM_019770, intron 1 of 3) CpG 299 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding common_peak1_94_78_-0.0220153744513221_6.29277306095144_0.301029995663951-4 chr8 69625184 69625582 + 0.301029995663951 NA promoter-TSS (NM_001045553) promoter-TSS (NM_001045553) 165 NM_172754 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak1_93_77_-0.0187958951334384_6.27600427129553_0.301029995663951-2 chr4 89048989 89050018 + 0.301029995663951 NA promoter-TSS (NR_033533) promoter-TSS (NR_033533) -804 NR_033533 100040617 Mm.171720 NR_033533 ENSMUSG00000085183 Wincr1 Gm12603 WNT induced non-coding RNA 1 ncRNA common_peak2_93_77_-0.0187958951334384_6.27600427129553_0.301029995663951 chr15 53613410 53614045 + 0.301029995663951 NA TTS (NR_039538) TTS (NR_039538) 552 NR_039538 100628567 NR_039538 ENSMUSG00000104794 Mir28c mmu-mir-28c microRNA 28c ncRNA common_peak1_94_78_-0.0220153744513221_6.29277306095144_0.301029995663951-3 chr6 91212409 91213559 + 0.301029995663951 NA intron (NM_007992, intron 1 of 17) intron (NM_007992, intron 1 of 17) 220 NM_007992 14115 Mm.249146 NM_007992 ENSMUSG00000064080 Fbln2 5730577E14Rik|FIBL-2 fibulin 2 protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-7 chr3 142530216 142530614 + 0.301029995663945 NA promoter-TSS (NM_001083312) promoter-TSS (NM_001083312) 79 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-5 chr18 61398226 61398919 + 0.301029995663945 NA promoter-TSS (NR_029879) promoter-TSS (NR_029879) -672 NR_029879 723889 NR_029879 ENSMUSG00000105200 Mir378a Mir378|Mirn378|mmu-mir-378|mmu-mir-378a microRNA 378a ncRNA common_peak1_99_82_-0.0197955487678607_6.36514165696299_0.301029995663945-2 chr19 44283709 44284926 + 0.301029995663945 NA Intergenic CpG -9359 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_99_82_-0.0197955487678607_6.36514165696299_0.301029995663945 chr16 45890476 45891810 + 0.301029995663945 NA Intergenic Intergenic -46392 NM_001357078 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding common_peak2_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-2 chr17 80790048 80790995 + 0.301029995663945 NA Intergenic ID_B1|SINE|B4 -62496 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_137_113_-0.0162560897142763_6.8247619693076_0.301029995663945 chr3 110249790 110250949 + 0.301029995663945 NA non-coding (NR_024139, exon 1 of 2) non-coding (NR_024139, exon 1 of 2) 630 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding common_peak2_99_82_-0.0197955487678607_6.36514165696299_0.301029995663945 chr8 70490062 70490727 + 0.301029995663945 NA Intergenic Intergenic -2737 NM_018827 12931 Mm.335584 NM_018827 ENSMUSG00000007888 Crlf1 CLF-1|CRLM-3|CRLM3|NR6|NR6.1 cytokine receptor-like factor 1 protein-coding common_peak1_99_82_-0.0197955487678607_6.36514165696299_0.301029995663945-3 chr7 139294691 139295713 + 0.301029995663945 NA Intergenic Intergenic 46720 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_102_84_-0.0118035710794748_6.40348915059796_0.301029995663945-2 chr13 54100595 54102055 + 0.301029995663945 NA intron (NM_027324, intron 8 of 10) intron (NM_027324, intron 8 of 10) 29480 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak2_102_84_-0.0118035710794748_6.40348915059796_0.301029995663945 chr8 83601871 83602896 + 0.301029995663945 NA Intergenic Intergenic -5792 NM_018808 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_102_84_-0.0118035710794748_6.40348915059796_0.301029995663945 chr1 127774261 127775253 + 0.301029995663945 NA promoter-TSS (NR_045298) promoter-TSS (NR_045298) 593 NM_028399 72949 Mm.268672 NM_028399 ENSMUSG00000026349 Ccnt2 2900041I18Rik|C81304|CycT2|CycT2a|CycT2b cyclin T2 protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-9 chr8 69808796 69809261 + 0.301029995663945 NA intron (NM_198101, intron 1 of 20) intron (NM_198101, intron 1 of 20) 341 NM_198101 78816 Mm.324305 NM_198101 ENSMUSG00000036246 Gmip 5031419I10Rik Gem-interacting protein protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-2 chr10 116266368 116266923 + 0.301029995663945 NA intron (NM_001358484, intron 12 of 12) PB1D10|SINE|Alu -34729 NM_029928 19263 Mm.37213 NM_029928 ENSMUSG00000020154 Ptprb 3230402H02Rik|C130094E24|Ptpz|Rptpb|VE-PTP|Veptp protein tyrosine phosphatase, receptor type, B protein-coding common_peak2_132_109_-0.017592188978627_6.77256361903535_0.301029995663945 chr4 126103478 126104757 + 0.301029995663945 NA 5' UTR (NM_001145827, exon 1 of 13) 5' UTR (NM_001145827, exon 1 of 13) 160 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-4 chr4 116597391 116598259 + 0.301029995663945 NA promoter-TSS (NR_029450) promoter-TSS (NR_029450) -195 NR_029450 654318 Mm.255685 NR_029450 ENSMUSG00000085408 C530005A16Rik D930044c15rik RIKEN cDNA C530005A16 gene ncRNA common_peak1_114_94_-0.0144003873540592_6.56265541465392_0.301029995663945 chr11 46436993 46437951 + 0.301029995663945 NA intron (NM_001104556, intron 1 of 1) CpG 511 NM_025426 66213 Mm.24159 NM_025426 ENSMUSG00000020397 Med7 1110063B05Rik|Crsp33|Crsp9 mediator complex subunit 7 protein-coding common_peak1_114_94_-0.0144003873540592_6.56265541465392_0.301029995663945-2 chr8 57651618 57652541 + 0.301029995663945 NA intron (NR_040698, intron 1 of 3) CpG 326 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-6 chr2 18057068 18057452 + 0.301029995663945 NA promoter-TSS (NR_106115) promoter-TSS (NR_106115) -586 NR_106115 102466840 NR_106115 ENSMUSG00000099050 Mir7655 Gm27794|mmu-mir-7655 microRNA 7655 ncRNA common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-4 chr14 30904034 30904813 + 0.301029995663945 NA Intergenic Intergenic 17947 NM_001289632 16427 Mm.34819 NM_018746 ENSMUSG00000021922 Itih4 ITI-HC4|Itih-4|PK-120 inter alpha-trypsin inhibitor, heavy chain 4 protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945 chr1 16228674 16229408 + 0.301029995663945 NA 3' UTR (NM_025303, exon 14 of 14) 3' UTR (NM_025303, exon 14 of 14) 123159 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak2_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-3 chr4 6453632 6454158 + 0.301029995663945 NA intron (NM_010945, intron 1 of 30) CpG 376 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-3 chr13 72199223 72199891 + 0.301029995663945 NA Intergenic Intergenic -235834 NM_010573 16371 Mm.316056 NM_010573 ENSMUSG00000060969 Irx1 - Iroquois homeobox 1 protein-coding common_peak2_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945 chr13 118386658 118387230 + 0.301029995663945 NA exon (NM_021556, exon 1 of 5) exon (NM_021556, exon 1 of 5) 308 NM_021556 59054 Mm.143810 NM_021556 ENSMUSG00000021731 Mrps30 2610020A16Rik|AA968347|PAP|Pdcd9 mitochondrial ribosomal protein S30 protein-coding common_peak1_140_115_-0.0105390691713065_6.85271146054192_0.301029995663945 chr11 29546830 29548476 + 0.301029995663945 NA promoter-TSS (NM_028504) promoter-TSS (NM_028504) -297 NM_028504 73324 Mm.69388 NM_028504 ENSMUSG00000020461 Clhc1 1700034F02Rik clathrin heavy chain linker domain containing 1 protein-coding common_peak1_44_37_-0.0365593660170012_5.22964783043508_0.301029995663945-8 chr5 105801552 105801977 + 0.301029995663945 NA intron (NM_001122768, intron 2 of 2) intron (NM_001122768, intron 2 of 2) -74804 NR_030777 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_103_85_-0.0148365393934737_6.41884648500536_0.301029995663939 chr2 31953971 31954805 + 0.301029995663939 NA intron (NM_145144, intron 2 of 5) intron (NM_145144, intron 2 of 5) 4085 NM_145144 108897 Mm.24838 NM_145144 ENSMUSG00000001864 Aif1l 2810003C17Rik|AI043124|C87647|Iba2 allograft inflammatory factor 1-like protein-coding common_peak2_105_87_-0.020716542940681_6.44907334716696_0.301029995663939-2 chr8 84256742 84258170 + 0.301029995663939 NA promoter-TSS (NM_026423) promoter-TSS (NM_026423) -132 NM_026423 67873 Mm.278085 NM_026423 ENSMUSG00000004996 Mri1 2410018C20Rik methylthioribose-1-phosphate isomerase 1 protein-coding common_peak1_103_85_-0.0148365393934737_6.41884648500536_0.301029995663939-2 chr4 117155209 117156280 + 0.301029995663939 NA TTS (NR_030704) TTS (NR_030704) 104 NR_030704 100216533 NR_030704 ENSMUSG00000092680 Snord55 - small nucleolar RNA, C/D box 55 snoRNA common_peak1_105_87_-0.020716542940681_6.44907334716696_0.301029995663939 chr4 129600001 129601194 + 0.301029995663939 NA promoter-TSS (NM_029748) promoter-TSS (NM_029748) 51 NM_018799 54709 Mm.250874 NM_018799 ENSMUSG00000028798 Eif3i 36kDa|D4Ertd632e|Eif3s2|Trip1 eukaryotic translation initiation factor 3, subunit I protein-coding common_peak2_105_87_-0.020716542940681_6.44907334716696_0.301029995663939 chr11 100969571 100970531 + 0.301029995663939 NA exon (NM_008986, exon 1 of 2) exon (NM_008986, exon 1 of 2) 564 NM_001359105 19285 Mm.21864 NM_008986 ENSMUSG00000004044 Cavin1 2310075E07Rik|AW546441|Cav-p60|Cavin|Ptrf caveolae associated 1 protein-coding common_peak1_109_90_-0.0160173184210022_6.49978598098819_0.301029995663933 chr11 95084060 95085599 + 0.301029995663933 NA Intergenic B2_Mm1t|SINE|B2 -8018 NM_001306162 16400 Mm.57035 NM_013565 ENSMUSG00000001507 Itga3 AA407068|CD49C|GAPB3 integrin alpha 3 protein-coding common_peak2_216_177_-0.0106798214127295_7.47039352026003_0.301029995663933 chr17 88064004 88066056 + 0.301029995663933 NA promoter-TSS (NM_001348248) promoter-TSS (NM_001348248) -98 NM_001348248 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_142_117_-0.0150244961007084_6.87513080131149_0.301029995663933 chr1 86064464 86065364 + 0.301029995663933 NA intron (NM_027357, intron 1 of 24) CpG 295 NM_027357 70247 Mm.280013 NM_027357 ENSMUSG00000026229 Psmd1 2410026J11Rik|P112|S1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein-coding common_peak2_142_117_-0.0150244961007084_6.87513080131149_0.301029995663933-2 chr11 77811022 77812281 + 0.301029995663933 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 10353 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak2_180_148_-0.0139739304040347_7.21218155526014_0.301029995663933 chr9 99629061 99630591 + 0.301029995663933 NA 5' UTR (NM_001311142, exon 1 of 16) 5' UTR (NM_001311142, exon 1 of 16) 248 NM_001311142 72507 Mm.221455 NM_028258 ENSMUSG00000037784 Dzip1l 2610524A10Rik|AI663976 DAZ interacting protein 1-like protein-coding common_peak2_216_177_-0.0106798214127295_7.47039352026003_0.301029995663933-2 chr5 123907273 123908693 + 0.301029995663933 NA intron (NM_026603, intron 1 of 7) intron (NM_026603, intron 1 of 7) 708 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak2_142_117_-0.0150244961007084_6.87513080131149_0.301029995663933-3 chr14 20346392 20348039 + 0.301029995663933 NA promoter-TSS (NM_001360365) promoter-TSS (NM_001360365) 906 NM_027475 70601 Mm.35105 NM_027475 ENSMUSG00000021810 Ecd 5730461K03Rik|Hsgt1 ecdysoneless cell cycle regulator protein-coding common_peak2_145_119_-0.00953013961583604_6.9021255258006_0.301029995663933 chr2 35199944 35201001 + 0.301029995663933 NA intron (NM_026697, intron 1 of 7) CpG 648 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak1_159_131_-0.0158621151065113_7.0364630618052_0.30102999566392 chr18 68117886 68119062 + 0.30102999566392 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) -109472 NM_001357444 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_155_127_-0.00773618246391994_6.99613190876804_0.30102999566392 chr16 37868074 37870094 + 0.30102999566392 NA intron (NM_177093, intron 1 of 3) CpG 684 NM_177093 320184 Mm.390882 NM_177093 ENSMUSG00000034158 Lrrc58 1810012N18Rik|C330018J07Rik leucine rich repeat containing 58 protein-coding common_peak1_154_127_-0.0169485412665837_6.99152572936671_0.30102999566392 chr11 82780747 82782328 + 0.30102999566392 NA promoter-TSS (NR_126067) promoter-TSS (NR_126067) 428 NM_010716 16882 Mm.277136 NM_010716 ENSMUSG00000020697 Lig3 D11Wsu78e ligase III, DNA, ATP-dependent protein-coding common_peak1_160_131_-0.00693674756131379_7.0409257455778_0.30102999566392 chr5 137102341 137103026 + 0.30102999566392 NA Intergenic Intergenic 13524 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_164_135_-0.014849917245189_7.08003788262774_0.301029995663908 chr2 38545264 38547645 + 0.301029995663908 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 34578 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_215_176_-0.0091686583293269_7.46302122091833_0.301029995663896 chr10 116948229 116950778 + 0.301029995663896 NA intron (NM_001359645, intron 1 of 10) intron (NM_001359645, intron 1 of 10) 950 NM_001359645 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak2_123_101_-0.0090307819919575_6.66790995097552_0.301029995663896 chr15 89171922 89173674 + 0.301029995663896 NA intron (NM_138749, intron 1 of 37) intron (NM_138749, intron 1 of 37) 1153 NM_001159521 140570 Mm.267514 NM_138749 ENSMUSG00000036606 Plxnb2 Debt|plexin-B2 plexin B2 protein-coding common_peak1_206_169_-0.0119214094597826_7.40343023140781_0.301029995663896 chr18 63691510 63692892 + 0.301029995663896 NA 5' UTR (NM_016792, exon 1 of 8) 5' UTR (NM_016792, exon 1 of 8) 158 NM_016792 53382 Mm.19169 NM_016792 ENSMUSG00000024583 Txnl1 32kDa|TRP32|Txnl thioredoxin-like 1 protein-coding common_peak1_123_101_-0.0090307819919575_6.66790995097552_0.301029995663896 chr7 80801668 80803238 + 0.301029995663896 NA intron (NM_016721, intron 1 of 37) intron (NM_016721, intron 1 of 37) 878 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_122_101_-0.0206301721436022_6.66211025589969_0.301029995663896 chr4 105157260 105158916 + 0.301029995663896 NA intron (NM_080555, intron 1 of 5) CpG 741 NM_080555 67916 Mm.348326 NM_080555 ENSMUSG00000028517 Plpp3 1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b phospholipid phosphatase 3 protein-coding common_peak1_138_114_-0.0185129995612883_6.83623355116373_0.301029995663896 chr15 59647343 59648511 + 0.301029995663896 NA promoter-TSS (NM_144549) promoter-TSS (NM_144549) -727 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_149_122_-0.00643502053272105_6.93929699507288_0.301029995663883 chr12 84316582 84317708 + 0.301029995663883 NA non-coding (NR_045546, exon 1 of 12) non-coding (NR_045546, exon 1 of 12) 286 NM_001252583 52708 Mm.255150 NM_144833 ENSMUSG00000042472 Zfp410 Apa1|D12Ertd748e|Znf410 zinc finger protein 410 protein-coding common_peak1_149_122_-0.00643502053272105_6.93929699507288_0.301029995663883 chr5 123683393 123684648 + 0.301029995663883 NA intron (NM_001359224, intron 1 of 18) CpG 341 NM_019765 56430 Mm.241109 NM_019765 ENSMUSG00000049550 Clip1 1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin CAP-GLY domain containing linker protein 1 protein-coding common_peak2_182_149_-0.00788199853879412_7.22487769122648_0.301029995663883 chr9 120933455 120935200 + 0.301029995663883 NA intron (NM_007614, intron 1 of 14) CpG 749 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak2_149_122_-0.00643502053272105_6.93929699507288_0.301029995663883-2 chr15 11084454 11086117 + 0.301029995663883 NA intron (NM_175501, intron 2 of 23) intron (NM_175501, intron 2 of 23) 20512 NM_175501 239337 Mm.224825 NM_175501 ENSMUSG00000047497 Adamts12 ADAMTS-12|AI605170 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 protein-coding common_peak2_149_122_-0.00643502053272105_6.93929699507288_0.301029995663883-3 chr3 132683555 132684621 + 0.301029995663883 NA promoter-TSS (NM_001163455) promoter-TSS (NM_001163455) -56 NM_001163455 271981 Mm.257864 NM_173032 ENSMUSG00000028030 Tbck 1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl TBC1 domain containing kinase protein-coding common_peak2_276_225_-0.00541911909927251_7.81746940286555_0.301029995663859 chr1 30948874 30951043 + 0.301029995663859 NA promoter-TSS (NR_002688) promoter-TSS (NR_002688) -203 NM_011200 19243 Mm.491181 NM_011200 ENSMUSG00000026064 Ptp4a1 AA415290|AU019864|C130021B01|Prl-1 protein tyrosine phosphatase 4a1 protein-coding common_peak2_336_274_-0.00766093993523143_8.09945733844441_0.301029995663834 chr15 79545046 79547498 + 0.301029995663834 NA 5' UTR (NM_199080, exon 1 of 13) 5' UTR (NM_199080, exon 1 of 13) 287 NM_199079 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak2_356_290_-0.0066597929167358_8.18154544644992_0.301029995663809 chr15 28023948 28025945 + 0.301029995663809 NA intron (NM_001081302, intron 1 of 56) CpG 902 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak1_26_0_4.4796018304734_2.2398009152367_NA chr3 65125265 65125699 + 0 NA intron (NM_010597, intron 1 of 13) intron (NM_010597, intron 1 of 13) 16468 NM_010597 16497 Mm.316402 NM_010597 ENSMUSG00000027827 Kcnab1 Akr8a8|Kvbeta1.1|mKv(beta)1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 protein-coding unique_peak1_25_0_4.42553817445511_2.21276908722756_NA chr4 118426983 118427245 + 0 NA promoter-TSS (NM_019422) promoter-TSS (NM_019422) -979 NM_001039175 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding unique_peak1_25_0_4.42553817445511_2.21276908722756_NA-2 chr9 74912791 74913117 + 0 NA Intergenic Intergenic -39926 NM_001359816 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding unique_peak1_23_0_4.31087564644525_2.15543782322262_NA chr13 15426438 15426888 + 0 NA Intergenic Intergenic -37060 NM_008130 14634 Mm.5098 NM_008130 ENSMUSG00000021318 Gli3 AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add GLI-Kruppel family member GLI3 protein-coding unique_peak1_24_0_4.36935384172555_2.18467692086278_NA chr14 103471917 103472228 + 0 NA Intergenic Intergenic -41269 NM_022886 64929 Mm.244003 NM_022886 ENSMUSG00000022123 Scel 9230114I02Rik sciellin protein-coding unique_peak1_23_0_4.31087564644525_2.15543782322262_NA-2 chr3 85630535 85630974 + 0 NA intron (NM_144896, intron 9 of 12) intron (NM_144896, intron 9 of 12) 56625 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding unique_peak1_23_0_4.31087564644525_2.15543782322262_NA-3 chr4 138792011 138792469 + 0 NA Intergenic Intergenic 16505 NM_011109 18782 Mm.71913 NM_011109 ENSMUSG00000041202 Pla2g2d GIID|GIID sPLA2|PLA2IID|Splash|mGIID|sPLA2-IID phospholipase A2, group IID protein-coding